Protein.Group	Protein.Ids	Protein.Names	Genes	First.Protein.Description	Proteotypic	Stripped.Sequence	Modified.Sequence	Precursor.Charge	Precursor.Id	D:\Studies\20250127_Astral_test\Rawdata\20250127_MagR_RatPlasmaSD3_500ng_30SPD_1.raw	D:\Studies\20250127_Astral_test\Rawdata\20250127_MagR_RatPlasmaSD3_500ng_30SPD_2.raw	D:\Studies\20250127_Astral_test\Rawdata\20250127_MagR_RatPlasmaSD3_500ng_30SPD_3.raw
O09014	O09014	S15A4_RAT	Slc15a4	Solute carrier family 15 member 4	1	AAAAAGVFAGR	AAAAAGVFAGR	2	AAAAAGVFAGR2	12840.2	15188.8	13656.3
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	AAAACLEK	AAAAC(UniMod:4)LEK	2	AAAAC(UniMod:4)LEK2			10750.8
D3ZAS9	D3ZAS9	D3ZAS9_RAT	Ddrgk1	DDRGK domain-containing protein 1	1	AAAADGEPLHNEEER	AAAADGEPLHNEEER	3	AAAADGEPLHNEEER3	45255.7	42256.6	47152.1
A0A8I6AI88	A0A8I6AI88	A0A8I6AI88_RAT	Chpf2	Hexosyltransferase	1	AAAAELER	AAAAELER	2	AAAAELER2	17877	19401.1	15266.4
O88321	O88321	O88321_RAT	Psmd4	26S proteasome non-ATPase regulatory subunit 4	1	AAAASAAEAGIATPGTEGER	AAAASAAEAGIATPGTEGER	2	AAAASAAEAGIATPGTEGER2	2624.33		1679.08
O88321	O88321	O88321_RAT	Psmd4	26S proteasome non-ATPase regulatory subunit 4	1	AAAASAAEAGIATPGTEGERDSDDALLK	AAAASAAEAGIATPGTEGERDSDDALLK	3	AAAASAAEAGIATPGTEGERDSDDALLK3	40351.1	31767.6	39233.6
Q5I0K8	Q5I0K8	RT07_RAT	Mrps7	Small ribosomal subunit protein uS7m	1	AAAATETSSVFADPVISK	AAAATETSSVFADPVISK	2	AAAATETSSVFADPVISK2	4701.04	5131.08	3163.79
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	AAAATGSFATFFSAQPK	AAAATGSFATFFSAQPK	2	AAAATGSFATFFSAQPK2	458960	464722	483057
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	AAAATGSFATFFSAQPK	AAAATGSFATFFSAQPK	3	AAAATGSFATFFSAQPK3	705887	582655	540138
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	AAAAYALGR	AAAAYALGR	2	AAAAYALGR2	9539.09	36194.5	24375.8
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	AAADFATQGK	AAADFATQGK	2	AAADFATQGK2	21717.1	24717.7	29715.2
M0RCA3	M0RCA3	M0RCA3_RAT	Zfpl1	Zinc finger protein-like 1	1	AAADSDPNLDPLMNPHIR	AAADSDPNLDPLMNPHIR	3	AAADSDPNLDPLMNPHIR3	19439.6	13238	18399.5
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	AAADTLQGPMQAAYR	AAADTLQGPMQAAYR	2	AAADTLQGPMQAAYR2	23277.5	21516.1	30944.7
Q3B7U1	Q3B7U1	Q3B7U1_RAT	Maged2	MAGE family member D2	1	AAAEAAAEAK	AAAEAAAEAK	1	AAAEAAAEAK1			2393.16
P14423	P14423	PA2GA_RAT	Pla2g2a	Phospholipase A2, membrane associated	1	AAAECFAR	AAAEC(UniMod:4)FAR	1	AAAEC(UniMod:4)FAR1	5761.34	4516.14	8563.6
P14423	P14423	PA2GA_RAT	Pla2g2a	Phospholipase A2, membrane associated	1	AAAECFAR	AAAEC(UniMod:4)FAR	2	AAAEC(UniMod:4)FAR2	1.12408e+06	1.1372e+06	1.26087e+06
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	AAAEEELQALVQR	AAAEEELQALVQR	2	AAAEEELQALVQR2	9430.04	11274.1	6251.65
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	AAAEEELQALVQR	AAAEEELQALVQR	3	AAAEEELQALVQR3	5568.67	9753.82	13051.5
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	AAAEELLAR	AAAEELLAR	2	AAAEELLAR2	8516.76	34559.2	8766.81
B2GUZ7	B2GUZ7	B2GUZ7_RAT	Tbcc	Tubulin folding cofactor C	1	AAAEELLQGEASAER	AAAEELLQGEASAER	2	AAAEELLQGEASAER2	2358.17	3168.97	3024.54
B2GUZ7	B2GUZ7	B2GUZ7_RAT	Tbcc	Tubulin folding cofactor C	1	AAAEELLQGEASAERLEEAANR	AAAEELLQGEASAERLEEAANR	3	AAAEELLQGEASAERLEEAANR3	4611.19		7221.54
A0A8I6AA08	A0A8I6AA08	A0A8I6AA08_RAT	Septin6	Septin	1	AAAELLQSQGSQAGGSQTLK	AAAELLQSQGSQAGGSQTLK	2	AAAELLQSQGSQAGGSQTLK2	5173.44	5877.26	6502.51
A0A8I6AA08	A0A8I6AA08	A0A8I6AA08_RAT	Septin6	Septin	1	AAAELLQSQGSQAGGSQTLK	AAAELLQSQGSQAGGSQTLK	3	AAAELLQSQGSQAGGSQTLK3	16891.2	15345	16341.6
D4A1Y5	D4A1Y5	D4A1Y5_RAT	Mthfd2	methenyltetrahydrofolate cyclohydrolase	1	AAAEVGINSETIVKPASVSEEELLNSIR	AAAEVGINSETIVKPASVSEEELLNSIR	3	AAAEVGINSETIVKPASVSEEELLNSIR3	16689.6	20434.1	21818
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	AAAEVNQEYGLDPK	AAAEVNQEYGLDPK	2	AAAEVNQEYGLDPK2	31540.2	29943.2	24366.1
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AAAFEDQENETVVVK	AAAFEDQENETVVVK	2	AAAFEDQENETVVVK2	466617	368311	431197
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AAAFEDQENETVVVK	AAAFEDQENETVVVK	3	AAAFEDQENETVVVK3	41360.6	37186.1	35588.8
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AAAFEDQENETVVVKEK	AAAFEDQENETVVVKEK	3	AAAFEDQENETVVVKEK3	9825.99	6433.58	5967.76
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	AAAFEQLQK	AAAFEQLQK	2	AAAFEQLQK2	145569	135769	143510
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	AAAFLGDIALDEEDLR	AAAFLGDIALDEEDLR	2	AAAFLGDIALDEEDLR2	33712.6	28756.2	30330.7
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	AAAFLGDIALDEEDLR	AAAFLGDIALDEEDLR	3	AAAFLGDIALDEEDLR3	4802.99	2441.73	6524.56
Q4FZY0	Q4FZY0	EFHD2_RAT	Efhd2	EF-hand domain-containing protein D2	1	AAAGELQEDSGLHVLAR	AAAGELQEDSGLHVLAR	2	AAAGELQEDSGLHVLAR2	2948.57		2739.41
Q4FZY0	Q4FZY0	EFHD2_RAT	Efhd2	EF-hand domain-containing protein D2	1	AAAGELQEDSGLHVLAR	AAAGELQEDSGLHVLAR	3	AAAGELQEDSGLHVLAR3	40260.3	48605.4	37270.9
G3V8D4	G3V8D4	APOC2_RAT	Apoc2	Apolipoprotein C-II	1	AAAGELYQK	AAAGELYQK	1	AAAGELYQK1	2.31155e+06	2.60823e+06	2.33422e+06
G3V8D4	G3V8D4	APOC2_RAT	Apoc2	Apolipoprotein C-II	1	AAAGELYQK	AAAGELYQK	2	AAAGELYQK2	260589	309000	204105
G3V8D4	G3V8D4	APOC2_RAT	Apoc2	Apolipoprotein C-II	1	AAAGELYQKTYLTSVDEK	AAAGELYQKTYLTSVDEK	3	AAAGELYQKTYLTSVDEK3	41355.5	40792.8	37250.3
Q66H54	Q66H54	FHI1B_RAT	Fhip1b	FHF complex subunit HOOK-interacting protein 1B	1	AAAGGADDLSAVR	AAAGGADDLSAVR	2	AAAGGADDLSAVR2		5000.07	4597.75
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	AAAGGLAMLTSMR	AAAGGLAMLTSMR	2	AAAGGLAMLTSMR2	11242.5	8452.07	7144.51
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	AAAGGLAMLTSMRPSLCSR	AAAGGLAMLTSMRPSLC(UniMod:4)SR	3	AAAGGLAMLTSMRPSLC(UniMod:4)SR3	16081.1	14319.6	20808.3
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	AAAGGPSLAMASHTSSR	AAAGGPSLAMASHTSSR	3	AAAGGPSLAMASHTSSR3		12439.4	5747.12
F1LR42	F1LR42	F1LR42_RAT	Rufy1	RUN and FYVE domain containing 1	1	AAAGLGDGGGGGGER	AAAGLGDGGGGGGER	2	AAAGLGDGGGGGGER2	18192	16447.2	15627.5
D4A748	D4A748	D4A748_RAT	Wdfy4	WDFY family member 4	1	AAAGQLLQWK	AAAGQLLQWK	2	AAAGQLLQWK2	2872.25	3589.97	
A2RRU1	A2RRU1	GYS1_RAT	Gys1	Glycogen [starch] synthase, muscle	1	AAAHCAHVFTTVSQITAIEAQHLLK	AAAHC(UniMod:4)AHVFTTVSQITAIEAQHLLK	4	AAAHC(UniMod:4)AHVFTTVSQITAIEAQHLLK4	8078.14	5952.64	5760.13
A0A8I6G3S1	A0A8I6G3S1	A0A8I6G3S1_RAT	Mon1b	Vacuolar fusion protein MON1 homolog	1	AAAILVVTK	AAAILVVTK	2	AAAILVVTK2	17340.8	19672.1	12607.7
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	AAAITSDLLESLGR	AAAITSDLLESLGR	2	AAAITSDLLESLGR2	67141.3	55506.7	61419.7
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	AAALATVNAWAEQTGMK	AAALATVNAWAEQTGMK	2	AAALATVNAWAEQTGMK2	50598.5	61141.2	55123.9
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	AAALATVNAWAEQTGMK	AAALATVNAWAEQTGMK	3	AAALATVNAWAEQTGMK3	10890.3	7959.14	5579.29
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	AAALCNVCELSGK	AAALC(UniMod:4)NVC(UniMod:4)ELSGK	2	AAALC(UniMod:4)NVC(UniMod:4)ELSGK2	62091.6	65341	63227.5
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	AAALEAMK	AAALEAMK	2	AAALEAMK2	81398	80378.8	77393
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	AAALEAMKDYTK	AAALEAMKDYTK	3	AAALEAMKDYTK3	12490.7	16829	18980.2
Q9Z136	Q9Z136	TSC1_RAT	Tsc1	Hamartin	1	AAALEEHNAAMK	AAALEEHNAAMK	3	AAALEEHNAAMK3	14744.2	13312.8	17159.4
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	AAALEFLNR	AAALEFLNR	2	AAALEFLNR2	108241	92651.1	94379.8
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	AAALEFLNRFEEAK	AAALEFLNRFEEAK	3	AAALEFLNRFEEAK3	21191.3	16996.3	42813.4
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	AAALEQFK	AAALEQFK	1	AAALEQFK1	3132.1		3041.61
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	AAALEQFK	AAALEQFK	2	AAALEQFK2	168147	141681	97308.8
Q5BK06	Q5BK06	CCDB1_RAT	Ccndbp1	Cyclin-D1-binding protein 1	1	AAALLMLTK	AAALLMLTK	2	AAALLMLTK2	14034.7	11262.3	8225.55
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	AAALQPLFSLIR	AAALQPLFSLIR	2	AAALQPLFSLIR2	213893	117838	147348
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	AAALSAK	AAALSAK	1	AAALSAK1	3679.46	2648.41	5225.12
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	AAALVLQTIWGYK	AAALVLQTIWGYK	2	AAALVLQTIWGYK2	11154	18093.1	12455
Q5PQJ6	Q5PQJ6	P5CR3_RAT	Pycr3	Pyrroline-5-carboxylate reductase 3	1	AAAMSAVEAATCR	AAAMSAVEAATC(UniMod:4)R	2	AAAMSAVEAATC(UniMod:4)R2	19385	20472.3	21398.4
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	AAANFSDR	AAANFSDR	2	AAANFSDR2	6119.5	8744.64	16373.1
Q68FR6	Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	1	AAAPAPEEEMDECEQALAAEPK	AAAPAPEEEMDEC(UniMod:4)EQALAAEPK	3	AAAPAPEEEMDEC(UniMod:4)EQALAAEPK3	190953	247608	235211
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	AAAPGGPVPR	AAAPGGPVPR	2	AAAPGGPVPR2	8901.76	7739.73	7124.86
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	AAAPGTAVLLVTANVGSLFDDPENLQK	AAAPGTAVLLVTANVGSLFDDPENLQK	3	AAAPGTAVLLVTANVGSLFDDPENLQK3	2861.39		
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	AAAPGTAVLLVTANVGSLFDDPENLQK	AAAPGTAVLLVTANVGSLFDDPENLQK	4	AAAPGTAVLLVTANVGSLFDDPENLQK4	4408.77	5851.23	3019.2
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	AAAPMETCK	AAAPMETC(UniMod:4)K	1	AAAPMETC(UniMod:4)K1	2034.6	811.93	
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	AAAPMETCK	AAAPMETC(UniMod:4)K	2	AAAPMETC(UniMod:4)K2	78013.7	72015.9	95892.3
A0A0G2JV05	A0A0G2JV05	A0A0G2JV05_RAT	Mroh1	Maestro heat-like repeat family member 1	1	AAAPMFTGFLVLHAEPEQR	AAAPMFTGFLVLHAEPEQR	3	AAAPMFTGFLVLHAEPEQR3	1319.48		
D3ZMA2	D3ZMA2	D3ZMA2_RAT	Mtmr14	Myotubularin related protein 14	1	AAAPSPSGAIGGLLEQFAR	AAAPSPSGAIGGLLEQFAR	2	AAAPSPSGAIGGLLEQFAR2	18418	24446.3	41102
D3ZMA2	D3ZMA2	D3ZMA2_RAT	Mtmr14	Myotubularin related protein 14	1	AAAPSPSGAIGGLLEQFAR	AAAPSPSGAIGGLLEQFAR	3	AAAPSPSGAIGGLLEQFAR3	6351.12	8123.61	2381.33
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	AAAQCYIDLIIK	AAAQC(UniMod:4)YIDLIIK	2	AAAQC(UniMod:4)YIDLIIK2	94610.3	122030	99604
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	AAAQLGAEELQK	AAAQLGAEELQK	2	AAAQLGAEELQK2	34858.6	34381.8	43226.3
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	AAAQLGAEELQK	AAAQLGAEELQK	3	AAAQLGAEELQK3			4280.57
B3GNI6	B3GNI6	SEP11_RAT	Septin11	Septin-11	1	AAAQLLQSQAQQSGAQQTK	AAAQLLQSQAQQSGAQQTK	2	AAAQLLQSQAQQSGAQQTK2	33311.3	12811.7	26360.4
B3GNI6	B3GNI6	SEP11_RAT	Septin11	Septin-11	1	AAAQLLQSQAQQSGAQQTK	AAAQLLQSQAQQSGAQQTK	3	AAAQLLQSQAQQSGAQQTK3	78393.9	63913.6	79007.9
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	AAASGNENIQPPPLAYK	AAASGNENIQPPPLAYK	2	AAASGNENIQPPPLAYK2	22585.4	29223.8	25525.3
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	AAASGNENIQPPPLAYK	AAASGNENIQPPPLAYK	3	AAASGNENIQPPPLAYK3	15374.2	24036.5	27002.8
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	AAASLGDTLSEQQLGDSDIPVIVYR	AAASLGDTLSEQQLGDSDIPVIVYR	3	AAASLGDTLSEQQLGDSDIPVIVYR3	28055.2	46940.6	28340.4
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	AAASLVSR	AAASLVSR	2	AAASLVSR2	23499.7	28048.6	28354.8
P34980	P34980	PE2R3_RAT	Ptger3	Prostaglandin E2 receptor EP3 subtype	1	AAASQSSAQWGR	AAASQSSAQWGR	2	AAASQSSAQWGR2	2621.7	2816.37	
A0A8I6GKH8	A0A8I6GKH8	A0A8I6GKH8_RAT	Map7	Microtubule-associated protein 7	1	AAASSSSPGNIRPVK	AAASSSSPGNIRPVK	3	AAASSSSPGNIRPVK3	16253.5	14869	11814.6
D4A5G8	D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	AAASTDYYK	AAASTDYYK	2	AAASTDYYK2	109663	115533	122326
D4A5G8	D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	AAASTDYYKR	AAASTDYYKR	3	AAASTDYYKR3			7094.2
Q2QDE7	Q2QDE7	DNSL1_RAT	Dnase1l1	Deoxyribonuclease-1-like 1	1	AAATFDFPR	AAATFDFPR	2	AAATFDFPR2	5093.44	7246.71	3980.28
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	AAATLMTER	AAATLMTER	2	AAATLMTER2	82664	78487.8	83419.1
Q9EPH2	Q9EPH2	MRP_RAT	Marcksl1	MARCKS-related protein	1	AAATPESQEPQAK	AAATPESQEPQAK	2	AAATPESQEPQAK2	66333.8	64225	50501
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	AAATQPDGKDTPDEPWAFPAR	AAATQPDGKDTPDEPWAFPAR	3	AAATQPDGKDTPDEPWAFPAR3	37080.9	29537.9	35251.3
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	AAATTSQPVLTSQQIETIFFK	AAATTSQPVLTSQQIETIFFK	3	AAATTSQPVLTSQQIETIFFK3	7835.31	9217.13	7814.04
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	AAAVALPEEELK	AAAVALPEEELK	2	AAAVALPEEELK2	28628.3	25953.2	27418.5
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	AAAVALPEEELKR	AAAVALPEEELKR	2	AAAVALPEEELKR2	9910.96	7156.39	8182.28
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	AAAVALPEEELKR	AAAVALPEEELKR	3	AAAVALPEEELKR3	110064	115119	126738
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	AAAVGAANK	AAAVGAANK	1	AAAVGAANK1			24817.6
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	AAAVGAANK	AAAVGAANK	2	AAAVGAANK2			713877
A0A8I6G419	A0A8I6G419	A0A8I6G419_RAT	Sfxn2	Sidoreflexin	1	AAAVGITQVVISR	AAAVGITQVVISR	2	AAAVGITQVVISR2	3396.76		1078.25
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	AAAVHTAIR	AAAVHTAIR	2	AAAVHTAIR2	6361.83	7401.94	6287.66
P51111	P51111	HD_RAT	Htt	Huntingtin	1	AAAVLGMDK	AAAVLGMDK	2	AAAVLGMDK2	47916.5	62082.1	47399.4
P19234	P19234	NDUV2_RAT	Ndufv2	NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial	1	AAAVLPVLDLAQR	AAAVLPVLDLAQR	2	AAAVLPVLDLAQR2	228635	209513	236492
Q68FX0	Q68FX0	IDH3B_RAT	Idh3B	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	AAAVPVEFK	AAAVPVEFK	2	AAAVPVEFK2	159731	161239	146418
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	AAAVSALAK	AAAVSALAK	2	AAAVSALAK2	259548	330171	304872
Q9WTV5	Q9WTV5	PSMD9_RAT	Psmd9	26S proteasome non-ATPase regulatory subunit 9	1	AAAVSDIQELMR	AAAVSDIQELMR	2	AAAVSDIQELMR2	43249.3	47289.4	62242.1
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	AACDLVR	AAC(UniMod:4)DLVR	2	AAC(UniMod:4)DLVR2	30201.1	33201.5	25554.9
O09014	O09014	S15A4_RAT	Slc15a4	Solute carrier family 15 member 4	1	AACGAVLLAELLER	AAC(UniMod:4)GAVLLAELLER	2	AAC(UniMod:4)GAVLLAELLER2	2321.39		
D3ZN06	D3ZN06	D3ZN06_RAT	Cd248	CD248 molecule	1	AACGPSSCYALFPR	AAC(UniMod:4)GPSSC(UniMod:4)YALFPR	2	AAC(UniMod:4)GPSSC(UniMod:4)YALFPR2	810594	867593	903367
D3ZN06	D3ZN06	D3ZN06_RAT	Cd248	CD248 molecule	1	AACGPSSCYALFPR	AAC(UniMod:4)GPSSC(UniMod:4)YALFPR	3	AAC(UniMod:4)GPSSC(UniMod:4)YALFPR3	111710	131272	127417
P08649	P08649	CO4_RAT	C4	Complement C4	1	AACGQLNDFLQEYSSQGCQV	AAC(UniMod:4)GQLNDFLQEYSSQGC(UniMod:4)QV	3	AAC(UniMod:4)GQLNDFLQEYSSQGC(UniMod:4)QV3	9380.02	9099.56	5198.62
M0RCI5	M0RCI5	M0RCI5_RAT	Pla2g12b	Phospholipase A2, group XIIB	1	AACICAEEEKEEL	AAC(UniMod:4)IC(UniMod:4)AEEEKEEL	2	AAC(UniMod:4)IC(UniMod:4)AEEEKEEL2	4154.66	9190.1	
Q566C7	D3ZYH3;Q566C7;Q99MY2	NUDT3_RAT	Nudt3	Diphosphoinositol polyphosphate phosphohydrolase 1	0	AACLCFR	AAC(UniMod:4)LC(UniMod:4)FR	2	AAC(UniMod:4)LC(UniMod:4)FR2	8484.24	8048.58	10357.4
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	AACLESAQEPAGAWSNK	AAC(UniMod:4)LESAQEPAGAWSNK	2	AAC(UniMod:4)LESAQEPAGAWSNK2	11032.9	11520.3	7683.14
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	AACLESAQEPAGAWSNK	AAC(UniMod:4)LESAQEPAGAWSNK	3	AAC(UniMod:4)LESAQEPAGAWSNK3		4047.8	4967.66
A0A8I5ZYD0	A0A8I5ZYD0	A0A8I5ZYD0_RAT	Fstl4	Follistatin-like 4	1	AACLLGK	AAC(UniMod:4)LLGK	1	AAC(UniMod:4)LLGK1	3818.61	4566.15	3416.73
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	AACLPLPGYR	AAC(UniMod:4)LPLPGYR	2	AAC(UniMod:4)LPLPGYR2	102374	116744	83181.3
P02770	P02770	ALBU_RAT	Alb	Albumin	1	AACLTPK	AAC(UniMod:4)LTPK	1	AAC(UniMod:4)LTPK1	380909	310856	278289
P02770	P02770	ALBU_RAT	Alb	Albumin	1	AACLTPK	AAC(UniMod:4)LTPK	2	AAC(UniMod:4)LTPK2	9517.82		55236.6
D4A731	D4A731	D4A731_RAT	Ankib1	RBR-type E3 ubiquitin transferase	1	AACLVQQK	AAC(UniMod:4)LVQQK	2	AAC(UniMod:4)LVQQK2	12603.9	10413.8	16933.1
Q5I0D1	Q5I0D1	GLOD4_RAT	Glod4	Glyoxalase domain-containing protein 4	1	AACNGPYDGK	AAC(UniMod:4)NGPYDGK	2	AAC(UniMod:4)NGPYDGK2	3616.94	7746.36	6044.32
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	AACNICTVDSDQLAK	AAC(UniMod:4)NIC(UniMod:4)TVDSDQLAK	2	AAC(UniMod:4)NIC(UniMod:4)TVDSDQLAK2	15177.6	13379.5	10718.5
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	AACNLVR	AAC(UniMod:4)NLVR	2	AAC(UniMod:4)NLVR2	55042.7	52497.3	52242.2
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	AACVLTTQTLMR	AAC(UniMod:4)VLTTQTLMR	2	AAC(UniMod:4)VLTTQTLMR2	15840.5	12804.4	10809.7
A0A8I5ZUE7	A0A8I5ZUE7	A0A8I5ZUE7_RAT	Zc3h7b	Zinc finger CCCH-type containing 7B	1	AACYFTMGLYEK	AAC(UniMod:4)YFTMGLYEK	2	AAC(UniMod:4)YFTMGLYEK2	2822.33	2130.07	
Q9QY17	Q9QY17	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	1	AADAVEDLR	AADAVEDLR	2	AADAVEDLR2	161651	163945	157094
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	AADEALNATSSNGSHR	AADEALNATSSNGSHR	2	AADEALNATSSNGSHR2	4773.33	1907.57	4444.05
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	AADEALNATSSNGSHR	AADEALNATSSNGSHR	3	AADEALNATSSNGSHR3	20376.8	35047	35605.6
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	AADEEAFEDNSEEYIR	AADEEAFEDNSEEYIR	2	AADEEAFEDNSEEYIR2		4138.95	1968.1
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	AADEEAFEDNSEEYIRR	AADEEAFEDNSEEYIRR	3	AADEEAFEDNSEEYIRR3	6164.72		6119.92
Q9WVK7	Q9WVK7	HCDH_RAT	Hadh	Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial	1	AADEFVEK	AADEFVEK	2	AADEFVEK2	40320	30913.9	29477.6
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	AADELEAFLGGGAPGSR	AADELEAFLGGGAPGSR	2	AADELEAFLGGGAPGSR2	27049.3	22767.8	27643.4
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	AADELEAFLGGGAPGSR	AADELEAFLGGGAPGSR	3	AADELEAFLGGGAPGSR3	6172.14	8510.59	7495.62
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	AADEQESR	AADEQESR	1	AADEQESR1	22611.3	13693	32857.1
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	AADEQESR	AADEQESR	2	AADEQESR2	260965	219253	305050
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	AADEQESRVQYTVCIWR	AADEQESRVQYTVC(UniMod:4)IWR	3	AADEQESRVQYTVC(UniMod:4)IWR3	11445.5		6797.18
Q63610	Q63610;P58775;P09495;P04692	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	0	AADESER	AADESER	1	AADESER1	3983.59	7594.6	29276.6
Q63610	Q63610;P58775;P09495;P04692	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	0	AADESER	AADESER	2	AADESER2	215388	167488	226506
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	AADEVAEGK	AADEVAEGK	1	AADEVAEGK1			4417.34
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	AADEVAEGK	AADEVAEGK	2	AADEVAEGK2	40438.1		15708.6
A0A8I6AF61	A0A8I6AF61	A0A8I6AF61_RAT	Dusp3	Dual specificity protein phosphatase	1	AADFIDQALAHK	AADFIDQALAHK	3	AADFIDQALAHK3	2896.19		
Q9JM80	Q9JM80	PHAG1_RAT	Pag1	Phosphoprotein associated with glycosphingolipid-enriched microdomains 1	1	AADGDSGPGVEGPYEVLK	AADGDSGPGVEGPYEVLK	2	AADGDSGPGVEGPYEVLK2	5267.91	7324.4	4634.76
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	AADGSAVSTVTK	AADGSAVSTVTK	2	AADGSAVSTVTK2	92789.9	102894	126433
P52632	P52632	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	1	AADGYVKPQIK	AADGYVKPQIK	2	AADGYVKPQIK2	9126.59	2208.01	3317.27
P52632	P52632	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	1	AADGYVKPQIK	AADGYVKPQIK	3	AADGYVKPQIK3	181938	178245	194871
P01946	P01946	HBA_RAT	Hba1	Hemoglobin subunit alpha-1/2	1	AADHVEDLPGALSTLSDLHAHK	AADHVEDLPGALSTLSDLHAHK	3	AADHVEDLPGALSTLSDLHAHK3	101972	97652.5	84939.6
P01946	P01946	HBA_RAT	Hba1	Hemoglobin subunit alpha-1/2	1	AADHVEDLPGALSTLSDLHAHK	AADHVEDLPGALSTLSDLHAHK	4	AADHVEDLPGALSTLSDLHAHK4	1.20144e+06	1.14145e+06	1.28613e+06
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	AADIDQEVK	AADIDQEVK	2	AADIDQEVK2	352882	389007	318129
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	AADIDQEVKER	AADIDQEVKER	2	AADIDQEVKER2	4040.68	7426.22	3075.66
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	AADIDQEVKER	AADIDQEVKER	3	AADIDQEVKER3	122313	172274	140687
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	AADIGVAMGQTGTDVCK	AADIGVAMGQTGTDVC(UniMod:4)K	2	AADIGVAMGQTGTDVC(UniMod:4)K2	60163.8	64131.1	62207.6
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	AADIGVAMGQTGTDVCK	AADIGVAMGQTGTDVC(UniMod:4)K	3	AADIGVAMGQTGTDVC(UniMod:4)K3	12184	8648.96	14318
P02770	P02770	ALBU_RAT	Alb	Albumin	1	AADKDNCFATEGPNLVAR	AADKDNC(UniMod:4)FATEGPNLVAR	2	AADKDNC(UniMod:4)FATEGPNLVAR2	189590	166838	121020
P02770	P02770	ALBU_RAT	Alb	Albumin	1	AADKDNCFATEGPNLVAR	AADKDNC(UniMod:4)FATEGPNLVAR	3	AADKDNC(UniMod:4)FATEGPNLVAR3	2.49745e+06	2.39995e+06	2.19366e+06
B1WBT4	B1WBT4	B1WBT4_RAT	Srpk2	SRSF protein kinase 2	1	AADLLVNPLDPQNADK	AADLLVNPLDPQNADK	2	AADLLVNPLDPQNADK2	33573.6	39146.9	34703.9
B1WBT4	B1WBT4	B1WBT4_RAT	Srpk2	SRSF protein kinase 2	1	AADLLVNPLDPQNADKIR	AADLLVNPLDPQNADKIR	3	AADLLVNPLDPQNADKIR3	18467.2	21875.5	17672.4
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	AADLLYAMCDR	AADLLYAMC(UniMod:4)DR	2	AADLLYAMC(UniMod:4)DR2	44231	57234	47378.7
O35854	O35854	BCAT2_RAT	Bcat2	Branched-chain-amino-acid aminotransferase, mitochondrial	1	AADLQVQVTR	AADLQVQVTR	2	AADLQVQVTR2	158994	134949	163409
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	AADMDLEWR	AADMDLEWR	2	AADMDLEWR2	75040.3	66212.2	67827.9
P0C2X9	P0C2X9	AL4A1_RAT	Aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1	AADMLSGPR	AADMLSGPR	2	AADMLSGPR2	158895	159359	181007
P62961	A0A8I6GL75;P62961;D3ZEV0	YBOX1_RAT	Ybx1	Y-box-binding protein 1	0	AADPPAENSSAPEAEQGGAE	AADPPAENSSAPEAEQGGAE	2	AADPPAENSSAPEAEQGGAE2	17962.6	16649.5	7614.72
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	AADPVSPLLHELTFQAMAYDLLHIEQDTYR	AADPVSPLLHELTFQAMAYDLLHIEQDTYR	4	AADPVSPLLHELTFQAMAYDLLHIEQDTYR4	5383.75	2019.87	
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	AADQGLPR	AADQGLPR	2	AADQGLPR2	50507.4	62812.5	59136.5
D4A6K4	D4A6K4	D4A6K4_RAT	Golga1	Golgin A1	1	AADQIASEQGMR	AADQIASEQGMR	2	AADQIASEQGMR2	5374.59	6174.92	6420.35
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	AADQYKPK	AADQYKPK	2	AADQYKPK2			12263.9
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	AADSACPELTVSSGGPGSR	AADSAC(UniMod:4)PELTVSSGGPGSR	2	AADSAC(UniMod:4)PELTVSSGGPGSR2	24779.4	22242.5	20299.1
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	AADSACPELTVSSGGPGSR	AADSAC(UniMod:4)PELTVSSGGPGSR	3	AADSAC(UniMod:4)PELTVSSGGPGSR3		6404.21	3457.4
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	AADSGAYTCVAHNPAGEDAR	AADSGAYTC(UniMod:4)VAHNPAGEDAR	3	AADSGAYTC(UniMod:4)VAHNPAGEDAR3	8451.97	3712.2	4425.6
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	AADTHGQDLNWTALAVDLAHHLQVSEDVIR	AADTHGQDLNWTALAVDLAHHLQVSEDVIR	4	AADTHGQDLNWTALAVDLAHHLQVSEDVIR4	2536.99	8952.86	5143.76
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	AADTIEALQK	AADTIEALQK	2	AADTIEALQK2	24581.5	36125.8	39052.2
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	AADTNEVVK	AADTNEVVK	1	AADTNEVVK1	2349.07	1654.21	1204.11
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	AADTNEVVK	AADTNEVVK	2	AADTNEVVK2	224617	240155	220974
F1LTX4	F1LTX4	F1LTX4_RAT	Lrrn4	Leucine rich repeat neuronal 4	1	AADTTCEPALGSK	AADTTC(UniMod:4)EPALGSK	2	AADTTC(UniMod:4)EPALGSK2	23654.5	26358.5	23842.2
Q925D6	Q925D6	Q925D6_RAT	Map2k6	Mitogen-activated protein kinase kinase 6	1	AADVASFVK	AADVASFVK	2	AADVASFVK2	12023	11461	
P11980	M0RD14;A0A8I6A0Y9;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	AADVHEVR	AADVHEVR	2	AADVHEVR2	2834.65		30018.4
P11980	M0RD14;A0A8I6A0Y9;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	AADVHEVRK	AADVHEVRK	2	AADVHEVRK2			14977.6
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	AADVTYDSEVMGVAGCQEK	AADVTYDSEVMGVAGC(UniMod:4)QEK	3	AADVTYDSEVMGVAGC(UniMod:4)QEK3	11098.6	13661.4	10365
F1LYX9	F1LYX9	F1LYX9_RAT	Dsg2	Desmoglein 2	1	AADVTYVK	AADVTYVK	2	AADVTYVK2	165789	141881	151823
Q4V8C7	Q4V8C7	PRKRA_RAT	Prkra	Interferon-inducible double-stranded RNA-dependent protein kinase activator A	1	AAEAAINILK	AAEAAINILK	2	AAEAAINILK2	19155.2	22026.1	25452.6
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	AAEAGVTEDQYGFLGTPAK	AAEAGVTEDQYGFLGTPAK	2	AAEAGVTEDQYGFLGTPAK2	6270.41	7667.74	
A0A8I6ABZ7	A0A8I6ABZ7	A0A8I6ABZ7_RAT	Dhx9	RNA helicase	1	AAECNIVVTQPR	AAEC(UniMod:4)NIVVTQPR	2	AAEC(UniMod:4)NIVVTQPR2	5439.85	4719.05	5815.34
F1LVX1	F1LVX1	F1LVX1_RAT	Dnajc1	DnaJ heat shock protein family (Hsp40) member C1	1	AAEDAWTQSQQK	AAEDAWTQSQQK	2	AAEDAWTQSQQK2	5981.02	6192.44	4004.43
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	AAEDLFVNIR	AAEDLFVNIR	2	AAEDLFVNIR2	125338	148042	127952
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	AAEDLFVNIR	AAEDLFVNIR	3	AAEDLFVNIR3			2430.67
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	AAEEAASTLASSIHPEQCIK	AAEEAASTLASSIHPEQC(UniMod:4)IK	3	AAEEAASTLASSIHPEQC(UniMod:4)IK3	29767	31688.2	28042.2
Q642B4	Q642B4	Q642B4_RAT	Clec14a	C-type lectin domain containing 14A	1	AAEEACSLR	AAEEAC(UniMod:4)SLR	2	AAEEAC(UniMod:4)SLR2	39775.5	42154.6	35298.6
A0A0G2JVT8	A0A8I6ARY9;A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	0	AAEECMVVSK	AAEEC(UniMod:4)MVVSK	2	AAEEC(UniMod:4)MVVSK2	6141.56	1224.76	3169.05
D3ZER2	D3ZER2	BFSP2_RAT	Bfsp2	Phakinin	1	AAEEEVSSLYK	AAEEEVSSLYK	2	AAEEEVSSLYK2	7025.4	3492.58	9739.97
A0A0G2JUH8	A0A0G2JUH8	A0A0G2JUH8_RAT	Snx13	Sorting nexin 13	1	AAEELQYLR	AAEELQYLR	2	AAEELQYLR2	2008	5251.15	4095.58
D3ZV26	D3ZV26	D3ZV26_RAT	Sft2d3	Vesicle transport protein	1	AAEEPTSGDRPAGAWLGSTALR	AAEEPTSGDRPAGAWLGSTALR	3	AAEEPTSGDRPAGAWLGSTALR3	8959.37	11706	19159.5
A0A8I6AGG9	A0A8I6AGG9	A0A8I6AGG9_RAT	Chchd3	Coiled-coil-helix-coiled-coil-helix domain containing 3	1	AAEEVESK	AAEEVESK	1	AAEEVESK1			1893.72
A0A8I6AGG9	A0A8I6AGG9	A0A8I6AGG9_RAT	Chchd3	Coiled-coil-helix-coiled-coil-helix domain containing 3	1	AAEEVESK	AAEEVESK	2	AAEEVESK2			38413.8
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	AAEEVGYPVMIK	AAEEVGYPVMIK	2	AAEEVGYPVMIK2	17462.1	15518.1	20770.1
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	AAEFATPWPDFVPGAGGESYK	AAEFATPWPDFVPGAGGESYK	3	AAEFATPWPDFVPGAGGESYK3	9698.73	9710.29	13190.6
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	AAEFLAACAGGDLDEAR	AAEFLAAC(UniMod:4)AGGDLDEAR	2	AAEFLAAC(UniMod:4)AGGDLDEAR2	6934.1	7707.53	5896.07
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	AAEFQLLK	AAEFQLLK	2	AAEFQLLK2		2899.77	
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	AAEGDASEDGLMVDWFR	AAEGDASEDGLMVDWFR	2	AAEGDASEDGLMVDWFR2			4526.75
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	AAEGGALAGEVR	AAEGGALAGEVR	2	AAEGGALAGEVR2	162264	139939	134943
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	AAEHEVPLQER	AAEHEVPLQER	2	AAEHEVPLQER2	4916.22		
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	AAEHEVPLQER	AAEHEVPLQER	3	AAEHEVPLQER3	133191	158156	150449
D3ZV82	D3ZV82;A0A8I5ZTR2	D3ZV82_RAT	Gbp7	Similar to guanylate binding protein family, member 6	0	AAEHYSEQMAQR	AAEHYSEQMAQR	3	AAEHYSEQMAQR3	4275.3		
Q9Z1L0	Q9Z1L0	PK3CB_RAT	Pik3cb	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform	1	AAEIASGDSANVSSR	AAEIASGDSANVSSR	2	AAEIASGDSANVSSR2	15101	17914.1	12529.2
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	AAEIDCQDIEER	AAEIDC(UniMod:4)QDIEER	2	AAEIDC(UniMod:4)QDIEER2	149446	136032	150338
P56603	P56603	SCAM1_RAT	Scamp1	Secretory carrier-associated membrane protein 1	1	AAELDRR	AAELDRR	2	AAELDRR2			26441.7
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	AAELEEELK	AAELEEELK	2	AAELEEELK2	49154.3	39192.3	45699.3
B0BN18	B0BN18	PFD2_RAT	Pfdn2	Prefoldin subunit 2	1	AAELEMELNEHSLVIDTLK	AAELEMELNEHSLVIDTLK	3	AAELEMELNEHSLVIDTLK3	20199.7	7389.93	8148.37
P67779	P67779;A0A8I5ZUY9	PHB1_RAT	Phb1	Prohibitin 1	0	AAELIANSLATAGDGLIELR	AAELIANSLATAGDGLIELR	3	AAELIANSLATAGDGLIELR3	47222.9	53058.5	30607.5
P67779	P67779;A0A8I5ZUY9	PHB1_RAT	Phb1	Prohibitin 1	0	AAELIANSLATAGDGLIELRK	AAELIANSLATAGDGLIELRK	3	AAELIANSLATAGDGLIELRK3	8506.31	3784.83	9762.65
D4AA72	D4AA72	D4AA72_RAT	Ppp1r16b	Protein phosphatase 1, regulatory subunit 16B	1	AAELLLDHGVR	AAELLLDHGVR	3	AAELLLDHGVR3	4389.11	5305.04	
F1MAF5	F1MAF5	F1MAF5_RAT	Pcid2	PCI domain-containing protein 2	1	AAELLMSCFR	AAELLMSC(UniMod:4)FR	2	AAELLMSC(UniMod:4)FR2		1838.14	2628.9
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	AAELMTR	AAELMTR	2	AAELMTR2	16977.9	17352.5	21875.6
F7FG68	F7FG68	F7FG68_RAT	Syvn1	Synoviolin 1	1	AAEMEHLLER	AAEMEHLLER	3	AAEMEHLLER3	7238.14	4670.73	4566.92
Q5XIC0	Q5XIC0	ECI2_RAT	Eci2	Enoyl-CoA delta isomerase 2	1	AAEMLLFGK	AAEMLLFGK	2	AAEMLLFGK2	74877	63247.1	73350.6
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	AAEMMASLLK	AAEMMASLLK	2	AAEMMASLLK2	96967.9	84962.5	91720.1
M0R4V1	D4A7P5;F2Z3R8;A0A8I5ZTE3;F1M7D0;G3V987;G3V9G0;G3V8P1;G3V8N7;M0R4V1;M0R5H4	M0R4V1_RAT	Pcdhb7	Protocadherin beta 7	0	AAEPGYLVTK	AAEPGYLVTK	2	AAEPGYLVTK2	26640.1	17459.9	17858.6
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	AAEPHFGTLPK	AAEPHFGTLPK	3	AAEPHFGTLPK3	28261.1	32398.5	28262.1
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	AAEPLLTLER	AAEPLLTLER	2	AAEPLLTLER2	37252.5	34965	53966.3
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	AAEPNLDLER	AAEPNLDLER	2	AAEPNLDLER2	22839.3	44050.3	38128.5
Q5FVF4	Q5FVF4	TM7S3_RAT	Tm7sf3	Transmembrane 7 superfamily member 3	1	AAEPPPCDVSTGQESR	AAEPPPC(UniMod:4)DVSTGQESR	2	AAEPPPC(UniMod:4)DVSTGQESR2	75238.9	68435.2	63134.6
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	AAEQAHLWAELVFLYDK	AAEQAHLWAELVFLYDK	3	AAEQAHLWAELVFLYDK3	60572.1	40016.5	58180
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	AAEQRPGSVLYGTHGPLPPLYSVSLALLSR	AAEQRPGSVLYGTHGPLPPLYSVSLALLSR	4	AAEQRPGSVLYGTHGPLPPLYSVSLALLSR4	30138.2	53847.6	36739.8
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	AAESIDQK	AAESIDQK	1	AAESIDQK1	2083.94		
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	AAESIDQK	AAESIDQK	2	AAESIDQK2	35619.2		59770.9
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	AAESLADPTEYENLFPGLK	AAESLADPTEYENLFPGLK	3	AAESLADPTEYENLFPGLK3	29042.7	44950.7	45431.3
D4A9Z6	D4A9Z6	D4A9Z6_RAT	Mrps35	Mitochondrial ribosomal protein S35	1	AAESSVAPSREELLGTK	AAESSVAPSREELLGTK	3	AAESSVAPSREELLGTK3	8663.63	8984.5	12981.4
F1LR42	F1LR42	F1LR42_RAT	Rufy1	RUN and FYVE domain containing 1	1	AAESWSAPILTLAR	AAESWSAPILTLAR	2	AAESWSAPILTLAR2	12062.3	9374.77	11614.2
Q6P6S9	Q6P6S9	ENTP5_RAT	Entpd5	Ectonucleoside triphosphate diphosphohydrolase 5	1	AAETHLIDYEK	AAETHLIDYEK	2	AAETHLIDYEK2	7888.13	10370.5	4958.4
Q6P6S9	Q6P6S9	ENTP5_RAT	Entpd5	Ectonucleoside triphosphate diphosphohydrolase 5	1	AAETHLIDYEK	AAETHLIDYEK	3	AAETHLIDYEK3	64203.3	53649.9	71300
Q5FVL8	Q5FVL8	Q5FVL8_RAT	Abcb10	ATP binding cassette subfamily B member 10	1	AAEVANAAEFIR	AAEVANAAEFIR	2	AAEVANAAEFIR2	16107.1	15589.2	27533.4
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	AAEVEGEQVDNK	AAEVEGEQVDNK	2	AAEVEGEQVDNK2	148587	128361	116599
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	AAEVGDDFLGDFVVGER	AAEVGDDFLGDFVVGER	2	AAEVGDDFLGDFVVGER2	21189.6	43831.5	42606.3
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	AAEVGDDFLGDFVVGER	AAEVGDDFLGDFVVGER	3	AAEVGDDFLGDFVVGER3	7577.18	12760.3	11263.3
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	AAEVPNEELVTLLLK	AAEVPNEELVTLLLK	2	AAEVPNEELVTLLLK2	35331.4	31981.7	30928.3
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	AAEVPNEELVTLLLK	AAEVPNEELVTLLLK	3	AAEVPNEELVTLLLK3	3091.83	619.507	1865.15
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	AAEVWMDEFK	AAEVWMDEFK	2	AAEVWMDEFK2	108118	107210	80354
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	AAFALGGLGSGFASTK	AAFALGGLGSGFASTK	2	AAFALGGLGSGFASTK2	29528.6	24122.4	38886.7
B0BNG0	B0BNG0	EMC2_RAT	Emc2	ER membrane protein complex subunit 2	1	AAFCLEELMMTNPHNHLYCQQYAEVK	AAFC(UniMod:4)LEELMMTNPHNHLYC(UniMod:4)QQYAEVK	4	AAFC(UniMod:4)LEELMMTNPHNHLYC(UniMod:4)QQYAEVK4	14962.5	13100.3	11781.8
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	AAFDDAIAELDTLSEESYK	AAFDDAIAELDTLSEESYK	3	AAFDDAIAELDTLSEESYK3	809590	1.0393e+06	1.06122e+06
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	AAFDVNNK	AAFDVNNK	2	AAFDVNNK2	30169.7	37527.5	28361.9
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	AAFEELEK	AAFEELEK	2	AAFEELEK2	21405.9	13098.4	19197.4
Q62902	Q62902	LMAN1_RAT	Lman1	Protein ERGIC-53	1	AAFENWEVEVTFR	AAFENWEVEVTFR	2	AAFENWEVEVTFR2	9711.63	7156.53	6327.43
Q5XIL2	Q5XIL2	P4K2B_RAT	Pi4k2b	Phosphatidylinositol 4-kinase type 2-beta	1	AAFESQMSVMR	AAFESQMSVMR	2	AAFESQMSVMR2	8587.06		
A0A8J8XL70	A0A8J8XL70	A0A8J8XL70_RAT	Serpinf1	Serpin family F member 1	1	AAFEWNEEGAGTSSNPDLQPVR	AAFEWNEEGAGTSSNPDLQPVR	3	AAFEWNEEGAGTSSNPDLQPVR3	8837.95	12098.2	5673.12
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	AAFFAER	AAFFAER	2	AAFFAER2	26393.8	20628.4	28215.4
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	AAFGLSEAGFNTACLTK	AAFGLSEAGFNTAC(UniMod:4)LTK	2	AAFGLSEAGFNTAC(UniMod:4)LTK2	34619.9	32538.8	30678.8
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	AAFGPGK	AAFGPGK	1	AAFGPGK1	36017.5	30366.6	32125.2
Q6MG88	Q6MG88	GPSM3_RAT	Gpsm3	G-protein-signaling modulator 3	1	AAFHTPK	AAFHTPK	1	AAFHTPK1	6880.16	7454.65	8939.38
Q6MG88	Q6MG88	GPSM3_RAT	Gpsm3	G-protein-signaling modulator 3	1	AAFHTPK	AAFHTPK	2	AAFHTPK2	36971.3	34569	18377.2
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	AAFLSCLTDVR	AAFLSC(UniMod:4)LTDVR	2	AAFLSC(UniMod:4)LTDVR2	24425.9	23642.1	21397.7
P35248	P35248	SFTPD_RAT	Sftpd	Pulmonary surfactant-associated protein D	1	AAFLSMTDVGTEGK	AAFLSMTDVGTEGK	2	AAFLSMTDVGTEGK2	6950.26		3660.67
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	AAFPLHDCK	AAFPLHDC(UniMod:4)K	2	AAFPLHDC(UniMod:4)K2	147947	128263	122848
P08649	P08649	CO4_RAT	C4	Complement C4	1	AAFRLFETKITQVLHFTK	AAFRLFETKITQVLHFTK	4	AAFRLFETKITQVLHFTK4	3728.47	8830.39	7152.94
P04797	F1LUV3;M0R660;E9PTN6;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	AAFSCDK	AAFSC(UniMod:4)DK	1	AAFSC(UniMod:4)DK1		59961	46203.8
P04797	F1LUV3;M0R660;E9PTN6;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	AAFSCDK	AAFSC(UniMod:4)DK	2	AAFSC(UniMod:4)DK2	10611.7	5.32791e+06	14125
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	AAFTCIK	AAFTC(UniMod:4)IK	2	AAFTC(UniMod:4)IK2	40087.1	32592.9	36788
A0A8I6ARV9	A0A8I6ARV9	A0A8I6ARV9_RAT	Ctsa	Carboxypeptidase	1	AAFTMFSR	AAFTMFSR	2	AAFTMFSR2	62249.5	68826.3	58938.7
Q99MI5	Q99MI5	Q99MI5_RAT	Srm	Spermidine synthase	1	AAFVLPEFTR	AAFVLPEFTR	2	AAFVLPEFTR2	36009.3	41098.5	38481.1
Q68EJ0	Q68EJ0	NB5R4_RAT	Cyb5r4	Cytochrome b5 reductase 4	1	AAGADGTDLFNEVHR	AAGADGTDLFNEVHR	3	AAGADGTDLFNEVHR3	10114.3	8430.5	13086.4
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	AAGAGNEAAALFLATSGAHANHR	AAGAGNEAAALFLATSGAHANHR	3	AAGAGNEAAALFLATSGAHANHR3	12641.1	11280.3	6265.56
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	AAGAGNEAAALFLATSGAHANHR	AAGAGNEAAALFLATSGAHANHR	4	AAGAGNEAAALFLATSGAHANHR4	74576.9	95150.6	114592
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	AAGAISAELEATTLQICAR	AAGAISAELEATTLQIC(UniMod:4)AR	2	AAGAISAELEATTLQIC(UniMod:4)AR2	6068.74	4486.51	
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	AAGAISAELEATTLQICAR	AAGAISAELEATTLQIC(UniMod:4)AR	3	AAGAISAELEATTLQIC(UniMod:4)AR3	10969.6	13921.2	7896.51
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	AAGAPQVNSK	AAGAPQVNSK	2	AAGAPQVNSK2	37745.1		38734.1
D3ZZ26	D3ZZ26	D3ZZ26_RAT	Ppp1r3d	Protein phosphatase 1, regulatory subunit 3D	1	AAGAQGAACGAGCNR	AAGAQGAAC(UniMod:4)GAGC(UniMod:4)NR	2	AAGAQGAAC(UniMod:4)GAGC(UniMod:4)NR2			379100
D3ZZ26	D3ZZ26	D3ZZ26_RAT	Ppp1r3d	Protein phosphatase 1, regulatory subunit 3D	1	AAGAQGAACGAGCNR	AAGAQGAAC(UniMod:4)GAGC(UniMod:4)NR	3	AAGAQGAAC(UniMod:4)GAGC(UniMod:4)NR3			10746.5
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	AAGAQIQGTK	AAGAQIQGTK	2	AAGAQIQGTK2	110972	105701	129282
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	AAGAVEALCAGHTGK	AAGAVEALC(UniMod:4)AGHTGK	2	AAGAVEALC(UniMod:4)AGHTGK2	5230.27	2591.62	1894.29
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	AAGAVEALCAGHTGK	AAGAVEALC(UniMod:4)AGHTGK	3	AAGAVEALC(UniMod:4)AGHTGK3	12105.6	4535.34	12867.3
P52759	P52759	RIDA_RAT	Rida	2-iminobutanoate/2-iminopropanoate deaminase	1	AAGCDFTNVVK	AAGC(UniMod:4)DFTNVVK	2	AAGC(UniMod:4)DFTNVVK2	8857	14343.4	10408.3
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	AAGCPSGQVCEIQAGVR	AAGC(UniMod:4)PSGQVC(UniMod:4)EIQAGVR	2	AAGC(UniMod:4)PSGQVC(UniMod:4)EIQAGVR2	697610	718462	696045
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	AAGCPSGQVCEIQAGVR	AAGC(UniMod:4)PSGQVC(UniMod:4)EIQAGVR	3	AAGC(UniMod:4)PSGQVC(UniMod:4)EIQAGVR3	659937	703005	793507
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	AAGCPSGQVCEIQAGVRQCR	AAGC(UniMod:4)PSGQVC(UniMod:4)EIQAGVRQC(UniMod:4)R	3	AAGC(UniMod:4)PSGQVC(UniMod:4)EIQAGVRQC(UniMod:4)R3	5703.58	20282.2	
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	AAGDDMGTVR	AAGDDMGTVR	2	AAGDDMGTVR2	107141	115302	114717
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	AAGDSHSGKPTCALCPLVGGK	AAGDSHSGKPTC(UniMod:4)ALC(UniMod:4)PLVGGK	4	AAGDSHSGKPTC(UniMod:4)ALC(UniMod:4)PLVGGK4	8996.11	6084.88	10767.8
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	AAGDWVLEVYDTPSQLR	AAGDWVLEVYDTPSQLR	2	AAGDWVLEVYDTPSQLR2	34360.7	41185.7	38908.7
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	AAGDWVLEVYDTPSQLR	AAGDWVLEVYDTPSQLR	3	AAGDWVLEVYDTPSQLR3	27001.3	34543.3	26477.5
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	AAGEGTLGK	AAGEGTLGK	1	AAGEGTLGK1	2662.22	1224.68	1456.68
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	AAGEGTLGK	AAGEGTLGK	2	AAGEGTLGK2	189014	181742	187013
Q6P503	Q6P503	Q6P503_RAT	Atp6v1d	V-type proton ATPase subunit D	1	AAGEVMEPANLLAEEK	AAGEVMEPANLLAEEK	2	AAGEVMEPANLLAEEK2	1887.49		
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	AAGFKDPLLASGTDGVGTK	AAGFKDPLLASGTDGVGTK	3	AAGFKDPLLASGTDGVGTK3	1972.04		3477.43
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	AAGGFVEQHPR	AAGGFVEQHPR	2	AAGGFVEQHPR2	5965.77	6978.22	
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	AAGGFVEQHPR	AAGGFVEQHPR	3	AAGGFVEQHPR3	33730.6	66892.7	46161.7
D3ZLT7	D3ZLT7	D3ZLT7_RAT	Kiaa2013	Similar to RIKEN cDNA 2510039O18	1	AAGGLHLPSWAR	AAGGLHLPSWAR	2	AAGGLHLPSWAR2	5021.77	4416.82	
D3ZLT7	D3ZLT7	D3ZLT7_RAT	Kiaa2013	Similar to RIKEN cDNA 2510039O18	1	AAGGLHLPSWAR	AAGGLHLPSWAR	3	AAGGLHLPSWAR3	10048.8	6006.07	11002.5
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	AAGGLLPAGK	AAGGLLPAGK	2	AAGGLLPAGK2	192639	144565	164112
D3ZTJ3	D3ZTJ3	D3ZTJ3_RAT	Adamts12	ADAM metallopeptidase with thrombospondin type 1 motif, 12	1	AAGGSGDQVYYR	AAGGSGDQVYYR	2	AAGGSGDQVYYR2	2640.34	1571.25	3253
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	AAGIGASGPGEER	AAGIGASGPGEER	2	AAGIGASGPGEER2	101990	98537.1	83463.1
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	AAGIGASGPGEERK	AAGIGASGPGEERK	3	AAGIGASGPGEERK3	37443.7	41215.1	58969.8
A0A8I5ZTN5	A0A8I5ZTN5	A0A8I5ZTN5_RAT	Adsl	Adenylosuccinate lyase	1	AAGIIHLGATSCYVGDNTDLIILR	AAGIIHLGATSC(UniMod:4)YVGDNTDLIILR	3	AAGIIHLGATSC(UniMod:4)YVGDNTDLIILR3		1493.38	2069.92
D4AE24	D4AE24	D4AE24_RAT	Rps6kb2	Ribosomal protein S6 kinase	1	AAGLETVGHYEEVELTESSVNLGPER	AAGLETVGHYEEVELTESSVNLGPER	3	AAGLETVGHYEEVELTESSVNLGPER3	2637.65	1428.77	1600.23
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	AAGNECPK	AAGNEC(UniMod:4)PK	2	AAGNEC(UniMod:4)PK2			750010
D4AA91	D4AA91	D4AA91_RAT	Cers5	Ceramide synthase 5	1	AAGNLHFGASPR	AAGNLHFGASPR	3	AAGNLHFGASPR3	11554.2	11443.6	
Q3KRD5	Q3KRD5	TOM34_RAT	Tomm34	Mitochondrial import receptor subunit TOM34	1	AAGNQNFR	AAGNQNFR	2	AAGNQNFR2		13724.3	12471.8
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	AAGPLESSGIEEVTQLK	AAGPLESSGIEEVTQLK	2	AAGPLESSGIEEVTQLK2	35855.7	45455.3	63641.5
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	AAGPLESSGIEEVTQLK	AAGPLESSGIEEVTQLK	3	AAGPLESSGIEEVTQLK3	3806.95	7299.08	7154.02
Q8K4G6	Q8K4G6	MACD1_RAT	Macrod1	ADP-ribose glycohydrolase MACROD1 (Fragment)	1	AAGSLLTDECR	AAGSLLTDEC(UniMod:4)R	2	AAGSLLTDEC(UniMod:4)R2	5001.88	1701.9	1398.15
B2GV97	B2GV97	B2GV97_RAT	Sepsecs	O-phosphoseryl-tRNA(Sec) selenium transferase	1	AAGSSLLNK	AAGSSLLNK	2	AAGSSLLNK2	11144	7665.34	10740.9
Q4KM64	Q4KM64	JAGN1_RAT	Jagn1	Protein jagunal homolog 1	1	AAGTDGSDFQHR	AAGTDGSDFQHR	2	AAGTDGSDFQHR2	13205.4	12150.7	9977.53
Q4KM64	Q4KM64	JAGN1_RAT	Jagn1	Protein jagunal homolog 1	1	AAGTDGSDFQHR	AAGTDGSDFQHR	3	AAGTDGSDFQHR3	69364.8	55369.5	70981.8
D3Z9L0	D3Z9L0	D3Z9L0_RAT	Agk	Acylglycerol kinase, mitochondrial	1	AAGTECLHASR	AAGTEC(UniMod:4)LHASR	3	AAGTEC(UniMod:4)LHASR3	30424.1	20910.4	33385
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	AAGTGFTVNVPWNGPR	AAGTGFTVNVPWNGPR	2	AAGTGFTVNVPWNGPR2	19852.4	17992.1	29660.9
D3ZUV9	D3ZUV9	D3ZUV9_RAT	Cnot3	CCR4-NOT transcription complex, subunit 3	1	AAGTLLNGPPQFSTTPEIK	AAGTLLNGPPQFSTTPEIK	2	AAGTLLNGPPQFSTTPEIK2		3828.06	3171.69
Q68FR6	A0A8I6AKG3;Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	0	AAGTLYTYPENWR	AAGTLYTYPENWR	2	AAGTLYTYPENWR2	2762.71		
P17105	P17105	IP3KA_RAT	Itpka	Inositol-trisphosphate 3-kinase A	1	AAGTSGLILK	AAGTSGLILK	2	AAGTSGLILK2	4376.64	2389.55	
B2GV06	B2GV06	SCOT1_RAT	Oxct1	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial	1	AAGTTVVEVEEIVDIGSFAPEDIHIPK	AAGTTVVEVEEIVDIGSFAPEDIHIPK	3	AAGTTVVEVEEIVDIGSFAPEDIHIPK3	17752.6	21892.1	13994.6
B2GV06	B2GV06	SCOT1_RAT	Oxct1	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial	1	AAGTTVVEVEEIVDIGSFAPEDIHIPK	AAGTTVVEVEEIVDIGSFAPEDIHIPK	4	AAGTTVVEVEEIVDIGSFAPEDIHIPK4	4888.08	5114.52	9304.89
P19944	P19944	RLA1_RAT	Rplp1	Large ribosomal subunit protein P1	1	AAGVNVEPFWPGLFAK	AAGVNVEPFWPGLFAK	2	AAGVNVEPFWPGLFAK2	489058	599692	570120
P19944	P19944	RLA1_RAT	Rplp1	Large ribosomal subunit protein P1	1	AAGVNVEPFWPGLFAK	AAGVNVEPFWPGLFAK	3	AAGVNVEPFWPGLFAK3	23926.5	25548.5	26628.1
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	AAGVPSASITWR	AAGVPSASITWR	2	AAGVPSASITWR2	153920	174841	164141
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	AAGVQGPSQMR	AAGVQGPSQMR	2	AAGVQGPSQMR2	41470.1	51777.3	45409.2
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	AAGVVLEMIR	AAGVVLEMIR	2	AAGVVLEMIR2	77481.7	77983	75828.9
P09650	P09650	MCPT1_RAT	Mcpt1	Mast cell protease 1	1	AAGWGQTGVTKPTSNTLR	AAGWGQTGVTKPTSNTLR	3	AAGWGQTGVTKPTSNTLR3	47140.1	43558.8	56727.9
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	AAHANPPTLLLPVIHMLEGR	AAHANPPTLLLPVIHMLEGR	3	AAHANPPTLLLPVIHMLEGR3	33139.7	3253.86	5802.83
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	AAHANPPTLLLPVIHMLEGR	AAHANPPTLLLPVIHMLEGR	4	AAHANPPTLLLPVIHMLEGR4	53940.6	28710.9	31291
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	AAHDLMDIEGEPSLDCTPIR	AAHDLMDIEGEPSLDC(UniMod:4)TPIR	3	AAHDLMDIEGEPSLDC(UniMod:4)TPIR3	39589.2	58786.1	46851.4
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	AAHDLMDIEGEPSLDCTPIRETTESIFSR	AAHDLMDIEGEPSLDC(UniMod:4)TPIRETTESIFSR	4	AAHDLMDIEGEPSLDC(UniMod:4)TPIRETTESIFSR4	12329.5	7077.61	18317.5
A0A8I5ZP83	D4A9Z8;A0A8I5ZP83	A0A8I5ZP83_RAT	Chmp4b	Charged multivesicular body protein 4B	0	AAHDNMDIDK	AAHDNMDIDK	2	AAHDNMDIDK2	73276.7	66668.4	56509.8
Q2V057	Q2V057	HYPDH_RAT	Prodh2	Hydroxyproline dehydrogenase	1	AAHEAGLAFGVK	AAHEAGLAFGVK	3	AAHEAGLAFGVK3	2359.75	4883.62	7993.22
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	AAHENRPSSHHVLFEEIEVPTSVDVLITCI	AAHENRPSSHHVLFEEIEVPTSVDVLITC(UniMod:4)I	4	AAHENRPSSHHVLFEEIEVPTSVDVLITC(UniMod:4)I4	24380.7	18793.7	9537.72
A0A8I6ANL9	A0A8I6ANL9	A0A8I6ANL9_RAT	Cdc23	Cell division cycle 23	1	AAHFLHGCNSK	AAHFLHGC(UniMod:4)NSK	2	AAHFLHGC(UniMod:4)NSK2	3340.2		1133.39
A0A8I6ANL9	A0A8I6ANL9	A0A8I6ANL9_RAT	Cdc23	Cell division cycle 23	1	AAHFLHGCNSK	AAHFLHGC(UniMod:4)NSK	3	AAHFLHGC(UniMod:4)NSK3	9208		6925.69
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	AAHFVFR	AAHFVFR	2	AAHFVFR2	120018	123109	133452
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	AAHIFFTDTCPEPLFSELGR	AAHIFFTDTC(UniMod:4)PEPLFSELGR	3	AAHIFFTDTC(UniMod:4)PEPLFSELGR3	69464.4	73968.9	57690.4
Q05096	Q05096	MYO1B_RAT	Myo1b	Unconventional myosin-Ib	1	AAHIFSESLVCHQIR	AAHIFSESLVC(UniMod:4)HQIR	4	AAHIFSESLVC(UniMod:4)HQIR4	6709.29	9009.59	7149.33
Q6AYD3	Q6AYD3	PA2G4_RAT	Pa2g4	Proliferation-associated protein 2G4	1	AAHLCAEAALR	AAHLC(UniMod:4)AEAALR	3	AAHLC(UniMod:4)AEAALR3	12018.4	10788.6	4401.49
B2RYL4	B2RYL4	B2RYL4_RAT	Armc6	Armadillo repeat containing 6	1	AAHPDCEDVAK	AAHPDC(UniMod:4)EDVAK	2	AAHPDC(UniMod:4)EDVAK2			4543.91
B2RYL4	B2RYL4	B2RYL4_RAT	Armc6	Armadillo repeat containing 6	1	AAHPDCEDVAK	AAHPDC(UniMod:4)EDVAK	3	AAHPDC(UniMod:4)EDVAK3			12584
B3DMA2	B3DMA2	ACD11_RAT	Acad11	Acyl-CoA dehydrogenase family member 11	1	AAHSIDTLGSAAAR	AAHSIDTLGSAAAR	2	AAHSIDTLGSAAAR2	884.648		2123.95
P11345	P11345	RAF1_RAT	Raf1	RAF proto-oncogene serine/threonine-protein kinase	1	AAHTEDINACTLTTSPR	AAHTEDINAC(UniMod:4)TLTTSPR	3	AAHTEDINAC(UniMod:4)TLTTSPR3	4817.82	1333.31	2812.5
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	AAHVFFTDSCPDALFNELVK	AAHVFFTDSC(UniMod:4)PDALFNELVK	3	AAHVFFTDSC(UniMod:4)PDALFNELVK3	41343.8	28193.2	25672.3
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	AAHVLMPHESTVEHTHVDINEMESPLATR	AAHVLMPHESTVEHTHVDINEMESPLATR	4	AAHVLMPHESTVEHTHVDINEMESPLATR4	7464.61		2906.14
Q63507	A0A8I6G5N0;Q63507	RL14_RAT	Rpl14	Large ribosomal subunit protein eL14	0	AAIAAAAAAK	AAIAAAAAAK	2	AAIAAAAAAK2	23255.4	34405.4	28306.2
D3ZE26	D3ZE26	D3ZE26_RAT	Tmcc2	Transmembrane and coiled-coil domain family 2	1	AAIDHLHQK	AAIDHLHQK	2	AAIDHLHQK2	5809.74		9263.85
Q5PQK2	Q5PQK2;B2RYG5	Q5PQK2_RAT	Fus	FUS RNA binding protein	0	AAIDWFDGK	AAIDWFDGK	2	AAIDWFDGK2	15149.6	6860.38	8706.8
P18298	P18298;A0A8I6G8F2	METK2_RAT	Mat2a	S-adenosylmethionine synthase isoform type-2	0	AAIDYQK	AAIDYQK	2	AAIDYQK2	60569.9	43974.3	66669.7
A0A8I5ZV31	A0A8I5ZV31	A0A8I5ZV31_RAT	Atp11c	Phospholipid-transporting ATPase	1	AAIECEQPQPDLYK	AAIEC(UniMod:4)EQPQPDLYK	2	AAIEC(UniMod:4)EQPQPDLYK2	4892.69	3298.46	2433.02
P19939	P19939	APOC1_RAT	Apoc1	Apolipoprotein C-I	1	AAIEHIK	AAIEHIK	1	AAIEHIK1	1.11856e+06	1.06251e+06	863844
P19939	P19939	APOC1_RAT	Apoc1	Apolipoprotein C-I	1	AAIEHIK	AAIEHIK	2	AAIEHIK2	3.64957e+07	3.4407e+07	3.12309e+07
P67779	P67779;A0A8I5ZUY9	PHB1_RAT	Phb1	Prohibitin 1	0	AAIISAEGDSK	AAIISAEGDSK	2	AAIISAEGDSK2	250833	246091	250841
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	AAILEWEK	AAILEWEK	2	AAILEWEK2	22707.1	30120.3	28056.8
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	AAILPTSIFLTNK	AAILPTSIFLTNK	2	AAILPTSIFLTNK2	121726	115784	117751
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	AAILPTSIFLTNKK	AAILPTSIFLTNKK	2	AAILPTSIFLTNKK2	7554.14	6387.24	5268.24
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	AAILPTSIFLTNKK	AAILPTSIFLTNKK	3	AAILPTSIFLTNKK3	27789.6	24688.5	30325
Q811U3	Q8K3M6;Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	0	AAILQTEVDALR	AAILQTEVDALR	2	AAILQTEVDALR2	120335	136079	163251
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	AAIQEFPVDK	AAIQEFPVDK	2	AAIQEFPVDK2	43325.9	51791.9	43560.5
Q62825	Q62825	EXOC3_RAT	Exoc3	Exocyst complex component 3	1	AAIQSQLDGVR	AAIQSQLDGVR	2	AAIQSQLDGVR2	19120.2	31344.7	16751
Q5XI83	Q5XI83	VP35L_RAT	Vps35l	VPS35 endosomal protein-sorting factor-like	1	AAISLVPEVPK	AAISLVPEVPK	2	AAISLVPEVPK2		8009.18	9171.13
Q4FZU0	Q4FZU0	Q4FZU0_RAT	Acp6	Acid phosphatase 6, lysophosphatidic	1	AAISQPGILEDLEK	AAISQPGILEDLEK	2	AAISQPGILEDLEK2	17796.5	13151.4	17217.2
M0R4M1	M0R4M1	M0R4M1_RAT	Nlrc5	NLR family, CARD domain containing 5	1	AAITCPTVR	AAITC(UniMod:4)PTVR	2	AAITC(UniMod:4)PTVR2	9461.97	7606.15	13201.1
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	AAIVADCSTFR	AAIVADC(UniMod:4)STFR	2	AAIVADC(UniMod:4)STFR2	14336.9	15923.2	10285.3
A0A096MKB0	A0A096MKB0	A0A096MKB0_RAT	Rab24	Max dimerization protein 3	1	AAIVCYDLTDSSSFER	AAIVC(UniMod:4)YDLTDSSSFER	2	AAIVC(UniMod:4)YDLTDSSSFER2	4065.31	2885.51	3360.91
F1LXS3	F1LXS3	F1LXS3_RAT	Matn2	Matrilin 2	1	AAIVFTDGR	AAIVFTDGR	2	AAIVFTDGR2	14610.2	7814.24	12957.9
P97849	G3V7V3;P97849	S27A1_RAT	Slc27a1	Long-chain fatty acid transport protein 1	0	AAIVVHSR	AAIVVHSR	2	AAIVVHSR2	12677.9	11063.2	14285.8
A0A8I5ZQZ1	A0A8I5ZQZ1	A0A8I5ZQZ1_RAT	Nufip2	Nuclear FMR1 interacting protein 2	1	AAIVYHTK	AAIVYHTK	2	AAIVYHTK2	4171.18	4891.31	
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	AAKPGANSTTDAVLLNK	AAKPGANSTTDAVLLNK	3	AAKPGANSTTDAVLLNK3	6756.93	9753.24	15275.1
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	AALADVLR	AALADVLR	2	AALADVLR2	139677	136995	132887
A0A0G2JTB2	A0A0G2JTB2	A0A0G2JTB2_RAT	Gbe1	1,4-alpha-glucan branching enzyme	1	AALADVPELGR	AALADVPELGR	2	AALADVPELGR2	7448.54	8891.35	8034.1
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	AALAEALR	AALAEALR	2	AALAEALR2	39446.9	50274.1	39649.6
Q62950	Q62950	DPYL1_RAT	Crmp1	Dihydropyrimidinase-related protein 1	1	AALAGGTTMIIDHVVPEPGSSLLTSFEK	AALAGGTTMIIDHVVPEPGSSLLTSFEK	3	AALAGGTTMIIDHVVPEPGSSLLTSFEK3			12758
P30427	P30427	PLEC_RAT	Plec	Plectin	1	AALAHSEEIATSQAAATK	AALAHSEEIATSQAAATK	3	AALAHSEEIATSQAAATK3	4653.1	3721.74	2299.72
A0A8I5ZXZ9	A0A8I5ZXZ9	A0A8I5ZXZ9_RAT	Cars2	cysteine--tRNA ligase	1	AALANDFDTPR	AALANDFDTPR	2	AALANDFDTPR2	5124.35	3949.28	7001.11
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	AALAPYNWPVWLGVHDR	AALAPYNWPVWLGVHDR	3	AALAPYNWPVWLGVHDR3	3.39577e+06	3.84897e+06	3.81189e+06
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	AALAPYNWPVWLGVHDR	AALAPYNWPVWLGVHDR	4	AALAPYNWPVWLGVHDR4	3452.68	4395.33	
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	AALAPYNWPVWLGVHDRR	AALAPYNWPVWLGVHDRR	3	AALAPYNWPVWLGVHDRR3	117124	195217	132781
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	AALAPYNWPVWLGVHDRR	AALAPYNWPVWLGVHDRR	4	AALAPYNWPVWLGVHDRR4	189105	290303	243227
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	AALAVDEVER	AALAVDEVER	2	AALAVDEVER2	321598	349555	298267
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	AALAVDEVERK	AALAVDEVERK	2	AALAVDEVERK2	5894.27	7811.38	3128.1
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	AALAVDEVERK	AALAVDEVERK	3	AALAVDEVERK3	68272.7	99622.2	116009
Q9JLU4	Q9JLU4	SHAN3_RAT	Shank3	SH3 and multiple ankyrin repeat domains protein 3	1	AALAVGSPGPVGGSFAR	AALAVGSPGPVGGSFAR	2	AALAVGSPGPVGGSFAR2	20603	26196.1	15935.2
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	AALAVLDAEAEK	AALAVLDAEAEK	2	AALAVLDAEAEK2	24768.5	19881.1	16945.7
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	AALAVLDAEAEKK	AALAVLDAEAEKK	3	AALAVLDAEAEKK3	8993.59	8032.53	4082.66
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	AALCAVHVIR	AALC(UniMod:4)AVHVIR	2	AALC(UniMod:4)AVHVIR2	9882.83	16563.2	5656.42
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	AALCHFCIDMLNAK	AALC(UniMod:4)HFC(UniMod:4)IDMLNAK	2	AALC(UniMod:4)HFC(UniMod:4)IDMLNAK2	4900.17	11413.7	10287.3
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	AALCHFCIDMLNAK	AALC(UniMod:4)HFC(UniMod:4)IDMLNAK	3	AALC(UniMod:4)HFC(UniMod:4)IDMLNAK3	234633	189730	187566
P30836	P30836	LYAM1_RAT	Sell	L-selectin	1	AALCYTASCQPESCNR	AALC(UniMod:4)YTASC(UniMod:4)QPESC(UniMod:4)NR	2	AALC(UniMod:4)YTASC(UniMod:4)QPESC(UniMod:4)NR2	17875.8	12638.8	10372
P30836	P30836	LYAM1_RAT	Sell	L-selectin	1	AALCYTASCQPESCNR	AALC(UniMod:4)YTASC(UniMod:4)QPESC(UniMod:4)NR	3	AALC(UniMod:4)YTASC(UniMod:4)QPESC(UniMod:4)NR3	8113.66	25905.1	21600.9
Q99N37	Q99N37	RHG17_RAT	Arhgap17	Rho GTPase-activating protein 17	1	AALDCSTSHLDEFYSDPHAVAGALK	AALDC(UniMod:4)STSHLDEFYSDPHAVAGALK	4	AALDC(UniMod:4)STSHLDEFYSDPHAVAGALK4	18383.9	18168.1	28736.9
P11348	P11348	DHPR_RAT	Qdpr	Dihydropteridine reductase	1	AALDGTPGMIGYGMAK	AALDGTPGMIGYGMAK	2	AALDGTPGMIGYGMAK2	52671	57274.4	56143
D4A769	D4A769	D4A769_RAT	Samd4b	Sterile alpha motif domain containing 4B	1	AALDMQSYR	AALDMQSYR	2	AALDMQSYR2	3583.89	4778.04	7073.83
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	AALEAIDELDLFGAHGGR	AALEAIDELDLFGAHGGR	3	AALEAIDELDLFGAHGGR3	17655.8	17370.2	21852.9
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	AALEAIDELDLFGAHGGRK	AALEAIDELDLFGAHGGRK	4	AALEAIDELDLFGAHGGRK4	4948.17	6966.46	4950.31
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	AALEALGSCLNNK	AALEALGSC(UniMod:4)LNNK	2	AALEALGSC(UniMod:4)LNNK2	88566.1	87452.6	90601.9
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	AALEALGSCLNNK	AALEALGSC(UniMod:4)LNNK	3	AALEALGSC(UniMod:4)LNNK3	3648.26	3480.99	3651.32
Q792H5	Q792H5	CELF2_RAT	Celf2	CUGBP Elav-like family member 2	1	AALEAQNALHNIK	AALEAQNALHNIK	2	AALEAQNALHNIK2	1275.73		
Q792H5	Q792H5	CELF2_RAT	Celf2	CUGBP Elav-like family member 2	1	AALEAQNALHNIK	AALEAQNALHNIK	3	AALEAQNALHNIK3	28282.8	24264.5	22778.5
Q4QQT3	Q4QQT3	CELF1_RAT	Celf1	CUGBP Elav-like family member 1	1	AALEAQNALHNMK	AALEAQNALHNMK	3	AALEAQNALHNMK3	4945.98		3566.71
A0A8I5ZLR7	A0A8I5ZLR7	A0A8I5ZLR7_RAT	Tsr2	Pre-rRNA-processing protein TSR2 homolog	1	AALEAWPALQIAVENGFGGVHSQEK	AALEAWPALQIAVENGFGGVHSQEK	3	AALEAWPALQIAVENGFGGVHSQEK3	4961.69	3374	6979.35
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	AALEDLTGR	AALEDLTGR	2	AALEDLTGR2	24159.6	26024.8	29050
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	AALEEHLR	AALEEHLR	2	AALEEHLR2	9202.63	8362.12	9578.73
A0A0G2JUU7	A0A0G2JUU7	A0A0G2JUU7_RAT	Tubgcp3	Gamma-tubulin complex component	1	AALEELQR	AALEELQR	2	AALEELQR2	16894.8	15367.7	11556.1
A0A8J8YFS5	A0A8J8YFS5	A0A8J8YFS5_RAT	Hars1	Histidine--tRNA ligase, cytoplasmic	1	AALEELVR	AALEELVR	2	AALEELVR2	17629.6	22136.1	37015.3
Q5FVC7	Q5FVC7	ACAP2_RAT	Acap2	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2	1	AALEEVEGDVAELELK	AALEEVEGDVAELELK	2	AALEEVEGDVAELELK2	5392.74		2772.92
A0A8I6AD03	A0A8I6AD03	A0A8I6AD03_RAT	Aplp1	Amyloid beta precursor like protein 1	1	AALEGFLAALQGDPPQAER	AALEGFLAALQGDPPQAER	2	AALEGFLAALQGDPPQAER2	25936.2	29576.2	35571.6
A0A8I6AD03	A0A8I6AD03	A0A8I6AD03_RAT	Aplp1	Amyloid beta precursor like protein 1	1	AALEGFLAALQGDPPQAER	AALEGFLAALQGDPPQAER	3	AALEGFLAALQGDPPQAER3	18767.8	24404.8	28380.1
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	AALEQDLAK	AALEQDLAK	2	AALEQDLAK2	82266	64342.3	66590
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	AALEQEKER	AALEQEKER	2	AALEQEKER2			4923.4
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	AALETVDR	AALETVDR	2	AALETVDR2	28631.8	38907.1	30172.3
Q6AXX6	Q6AXX6	PXL2A_RAT	Prxl2a	Peroxiredoxin-like 2A	1	AALEYLEDIDLK	AALEYLEDIDLK	2	AALEYLEDIDLK2	86847.9	61205.2	77184
P35248	P35248	SFTPD_RAT	Sftpd	Pulmonary surfactant-associated protein D	1	AALFPDGQSVGDK	AALFPDGQSVGDK	2	AALFPDGQSVGDK2	10291.2	14223.4	
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	AALGTLYLTATHVIFVENAPDTR	AALGTLYLTATHVIFVENAPDTR	3	AALGTLYLTATHVIFVENAPDTR3	5310.72	8357.16	6894.93
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	AALGTLYLTATHVIFVENAPDTRK	AALGTLYLTATHVIFVENAPDTRK	4	AALGTLYLTATHVIFVENAPDTRK4	9627.11	11209.3	5668.54
F7F5Q9	F7F5Q9	F7F5Q9_RAT	Hcls1	Hematopoietic cell specific Lyn substrate 1	1	AALGYDYK	AALGYDYK	1	AALGYDYK1	1632.79	2330.64	
F7F5Q9	F7F5Q9	F7F5Q9_RAT	Hcls1	Hematopoietic cell specific Lyn substrate 1	1	AALGYDYK	AALGYDYK	2	AALGYDYK2	248283	258164	269597
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	AALGYNILTQEEGQSVYDAK	AALGYNILTQEEGQSVYDAK	3	AALGYNILTQEEGQSVYDAK3	36617.2	37212	54230
Q58NB7	Q58NB7	Q58NB7_RAT	Rarres1	Retinoic acid receptor responder (Tazarotene induced) 1	1	AALHFLNFR	AALHFLNFR	2	AALHFLNFR2	27835.7	17401.4	20689
A0A8I6A9B2	A0A8I6A9B2	A0A8I6A9B2_RAT	Naa10	N-terminal amino-acid N(alpha)-acetyltransferase NatA	1	AALHLYSNTLNFQISEVEPK	AALHLYSNTLNFQISEVEPK	3	AALHLYSNTLNFQISEVEPK3	14463.9	11535.3	13624.6
D4A3E2	D4A3E2	D4A3E2_RAT	Npepl1	Aminopeptidase-like 1	1	AALHPPALAVLSHTPDGATQTIAWVGK	AALHPPALAVLSHTPDGATQTIAWVGK	4	AALHPPALAVLSHTPDGATQTIAWVGK4	10209.4	14720.8	13395.1
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	AALHQAFK	AALHQAFK	1	AALHQAFK1	3731.39	4890.51	1580.33
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	AALHQAFK	AALHQAFK	2	AALHQAFK2	25162.6	17853.5	15896.9
O35547	O35547	ACSL4_RAT	Acsl4	Long-chain-fatty-acid--CoA ligase 4	1	AALLDINCVK	AALLDINC(UniMod:4)VK	2	AALLDINC(UniMod:4)VK2	16785.5	24785.6	31027.8
O08816	O08816	WASL_RAT	Wasl	Actin nucleation-promoting factor WASL	1	AALLDQIR	AALLDQIR	2	AALLDQIR2	8654.39	6889.68	12332.2
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	AALLEAGMPESTEDK	AALLEAGMPESTEDK	2	AALLEAGMPESTEDK2	784903	813266	858178
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	AALLEAGMPESTEDK	AALLEAGMPESTEDK	3	AALLEAGMPESTEDK3	9125.28	8131.92	
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	AALLELWELR	AALLELWELR	2	AALLELWELR2	337308	253142	239792
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	AALLELWELRR	AALLELWELRR	2	AALLELWELRR2	4447.56	7408.88	
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	AALLELWELRR	AALLELWELRR	3	AALLELWELRR3	366502	305879	793683
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	AALLGEELASAAGAR	AALLGEELASAAGAR	2	AALLGEELASAAGAR2	54538.8	36429.7	50483.6
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	AALLGEELASAAGAR	AALLGEELASAAGAR	3	AALLGEELASAAGAR3	1884.19	4171.42	7173.92
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	AALLLDQYR	AALLLDQYR	2	AALLLDQYR2	51124.7	55233.7	52943.5
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	AALLLDQYRK	AALLLDQYRK	3	AALLLDQYRK3	5771.37	12035.9	
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	AALLNFDEFAVSK	AALLNFDEFAVSK	2	AALLNFDEFAVSK2	412172	468790	412366
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	AALLNQHYQVNFK	AALLNQHYQVNFK	2	AALLNQHYQVNFK2	1677.11	4304.32	614.794
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	AALLNQHYQVNFK	AALLNQHYQVNFK	3	AALLNQHYQVNFK3	42680.4	34366.4	45669.7
D3ZM03	D3ZM03	D3ZM03_RAT	Vma21	Vacuolar ATPase assembly integral membrane protein VMA21	1	AALNALQPPEFR	AALNALQPPEFR	2	AALNALQPPEFR2	81129.2	90954.5	75770.5
A0A0G2K516	A0A0G2K516	A0A0G2K516_RAT	Stx11	Syntaxin 11	1	AALNEIESR	AALNEIESR	2	AALNEIESR2	917802	912598	961404
O08838	O08838	AMPH_RAT	Amph	Amphiphysin	1	AALPAGEGESPEGAK	AALPAGEGESPEGAK	2	AALPAGEGESPEGAK2	8668.59	9697.07	
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	AALPDLTR	AALPDLTR	2	AALPDLTR2	235110	237753	219899
O88923	O88923	AGRL2_RAT	Adgrl2	Adhesion G protein-coupled receptor L2	1	AALPFGLVR	AALPFGLVR	2	AALPFGLVR2	5925.56	4928.93	2616.16
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	AALPLTTSDTK	AALPLTTSDTK	2	AALPLTTSDTK2	68736.4	84833.6	67490.6
P51111	P51111	HD_RAT	Htt	Huntingtin	1	AALPSLTNPPSLSPIR	AALPSLTNPPSLSPIR	2	AALPSLTNPPSLSPIR2	94148.3	99994	89139.8
P51111	P51111	HD_RAT	Htt	Huntingtin	1	AALPSLTNPPSLSPIR	AALPSLTNPPSLSPIR	3	AALPSLTNPPSLSPIR3	6974.06	8184.31	5867.33
O88902	O88902	PTN23_RAT	Ptpn23	Tyrosine-protein phosphatase non-receptor type 23 (Fragment)	1	AALPTPALTPEDK	AALPTPALTPEDK	2	AALPTPALTPEDK2	5207.67	9535.56	
D3ZBQ1	D3ZBQ1	D3ZBQ1_RAT	Foxo3	Forkhead box O3	1	AALQAAPESADDSPSQLSK	AALQAAPESADDSPSQLSK	2	AALQAAPESADDSPSQLSK2	9651.28	13693.1	7186.9
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	AALQALRK	AALQALRK	2	AALQALRK2	97518.3	159487	133693
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	AALQEEEQASK	AALQEEEQASK	2	AALQEEEQASK2	574006	668929	678894
P62853	M0R763;F1M6F4;P62853	RS25_RAT	Rps25	Small ribosomal subunit protein eS25	0	AALQELLSK	AALQELLSK	2	AALQELLSK2	37495.6	29403.3	32222.2
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	AALQESR	AALQESR	2	AALQESR2	29278.4		37811.5
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	AALQFLMR	AALQFLMR	2	AALQFLMR2	5707.14	4918.57	3117.24
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	AALQIPEHTALGTR	AALQIPEHTALGTR	3	AALQIPEHTALGTR3	58041	54192.8	52457.8
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	AALQNTEMNEYK	AALQNTEMNEYK	2	AALQNTEMNEYK2	22855.9	35139.6	32996.9
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	AALQNTEMNEYKK	AALQNTEMNEYKK	2	AALQNTEMNEYKK2	7062.04	5487.95	864.797
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	AALQNTEMNEYKK	AALQNTEMNEYKK	3	AALQNTEMNEYKK3	56140	51095.4	59240.4
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	AALQNTTLQSLGLTGGSATIR	AALQNTTLQSLGLTGGSATIR	3	AALQNTTLQSLGLTGGSATIR3	21493.2	29383.6	25745.6
O55171	O55171;A0A8I6A6H9;D3ZIQ1;O88267	ACOT2_RAT	Acot2	Acyl-coenzyme A thioesterase 2, mitochondrial	0	AALRDEK	AALRDEK	2	AALRDEK2			34505.4
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	AALSAGK	AALSAGK	1	AALSAGK1	28199	1978.5	37582.7
D4A1A5	D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	AALSEMVEYITHNR	AALSEMVEYITHNR	2	AALSEMVEYITHNR2	3281.03	11916.1	
D4A1A5	D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	AALSEMVEYITHNR	AALSEMVEYITHNR	3	AALSEMVEYITHNR3	40572.3	48879.4	46175.9
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	AALSGANVLTLIEK	AALSGANVLTLIEK	2	AALSGANVLTLIEK2	106508	183153	98433
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	AALSGANVLTLIEK	AALSGANVLTLIEK	3	AALSGANVLTLIEK3	13512.7	15865.7	17662.6
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	AALSGANVLTLIEKDIR	AALSGANVLTLIEKDIR	3	AALSGANVLTLIEKDIR3		2332.32	3801.95
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	AALSGLLYR	AALSGLLYR	2	AALSGLLYR2	232493	209631	245085
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	AALSPGSVFSPGR	AALSPGSVFSPGR	2	AALSPGSVFSPGR2	71757.3	94816.4	104493
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	AALSSFQK	AALSSFQK	2	AALSSFQK2	146589	119214	165206
A0A8I5ZS67	A0A8I5ZS67	A0A8I5ZS67_RAT	Gigyf2	GRB10 interacting GYF protein 2	1	AALSSQQQQQLALLLQQFQALK	AALSSQQQQQLALLLQQFQALK	3	AALSSQQQQQLALLLQQFQALK3	2151.03	927.039	5419.1
B0BNI5	B0BNI5	OLFL3_RAT	Olfml3	Olfactomedin-like protein 3	1	AALSYFPR	AALSYFPR	2	AALSYFPR2	112356	106502	115416
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	AALTEVSLGSIYQAMILGADSK	AALTEVSLGSIYQAMILGADSK	3	AALTEVSLGSIYQAMILGADSK3	232760	204515	248653
Q03070	Q03070	CHIO_RAT	Chn2	Beta-chimaerin	1	AALTHNDNHFNYEK	AALTHNDNHFNYEK	3	AALTHNDNHFNYEK3	2318.26	1684.38	2315.92
Q03070	Q03070	CHIO_RAT	Chn2	Beta-chimaerin	1	AALTHNDNHFNYEK	AALTHNDNHFNYEK	4	AALTHNDNHFNYEK4	9454.41	4901.97	3750.2
Q499P8	Q499P8	RUSF1_RAT	Rusf1	RUS family member 1	1	AALTMHQAR	AALTMHQAR	2	AALTMHQAR2	1320.78	2477.81	
A0A8I5ZKH1	A0A8I5ZKH1	A0A8I5ZKH1_RAT	Ythdc2	RNA helicase	1	AALVAGMYPNLVHVDR	AALVAGMYPNLVHVDR	3	AALVAGMYPNLVHVDR3	3410.41	7253.52	2810.62
D3ZL50	D3ZL50	D3ZL50_RAT	Skic3	Tetratricopeptide repeat domain 37	1	AALVDFLDGK	AALVDFLDGK	2	AALVDFLDGK2	13563.1	8509.97	11870.7
Q4QQV0	Q4QQV0	Q4QQV0_RAT	Tubb6	Tubulin beta chain	1	AALVDLEPGTMDSVR	AALVDLEPGTMDSVR	2	AALVDLEPGTMDSVR2	189853	202421	210736
Q4QQV0	Q4QQV0	Q4QQV0_RAT	Tubb6	Tubulin beta chain	1	AALVDLEPGTMDSVR	AALVDLEPGTMDSVR	3	AALVDLEPGTMDSVR3	8500.77	4368.14	10359.9
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	AALWALQGGTSVVIANGTHPK	AALWALQGGTSVVIANGTHPK	3	AALWALQGGTSVVIANGTHPK3	6443.39	1496.02	4804.16
B0BNM9	B0BNM9	GLTP_RAT	GLTP	Glycolipid transfer protein	1	AALYAAPYK	AALYAAPYK	2	AALYAAPYK2	6455.67	9553.35	7993.11
A0A8I6ANL9	A0A8I6ANL9	A0A8I6ANL9_RAT	Cdc23	Cell division cycle 23	1	AALYFQR	AALYFQR	2	AALYFQR2	33713.1	31256.9	31521.4
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	AALYIIGDK	AALYIIGDK	2	AALYIIGDK2	14909.1	6804.25	8764.97
P52020	P52020	ERG1_RAT	Sqle	Squalene monooxygenase	1	AAMAEPNVK	AAMAEPNVK	2	AAMAEPNVK2	6697.39		7508.68
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	AAMAIPVMYEHLK	AAMAIPVMYEHLK	3	AAMAIPVMYEHLK3	9913.31	9226.35	6642.03
Q68FP9	Q68FP9	COG6_RAT	Cog6	Conserved oligomeric Golgi complex subunit 6	1	AAMAQFDR	AAMAQFDR	2	AAMAQFDR2	30124.8	35557.2	34327.8
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	AAMDFCMNMNTK	AAMDFC(UniMod:4)MNMNTK	2	AAMDFC(UniMod:4)MNMNTK2	1868.71	6889.72	2099.42
B0BNF1	B0BNF1	SEPT8_RAT	Septin8	Septin-8	1	AAMEALQSQALHATSQQPLR	AAMEALQSQALHATSQQPLR	3	AAMEALQSQALHATSQQPLR3	6400.32		
B0BNF1	B0BNF1	SEPT8_RAT	Septin8	Septin-8	1	AAMEALQSQALHATSQQPLRK	AAMEALQSQALHATSQQPLRK	4	AAMEALQSQALHATSQQPLRK4	4369.51	10640.1	6218.67
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AAMEPIVISAK	AAMEPIVISAK	2	AAMEPIVISAK2	4.6615e+06	4.58299e+06	4.84614e+06
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	AAMGLGAQGLILSR	AAMGLGAQGLILSR	2	AAMGLGAQGLILSR2	84706.1	102110	102722
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	AAMGLGAQGLILSR	AAMGLGAQGLILSR	3	AAMGLGAQGLILSR3	1097.02	2210.27	2369.84
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	AAMIVNQLSK	AAMIVNQLSK	2	AAMIVNQLSK2	24957.8	22168.5	44088.2
P62944	P52303;P62944	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	AAMIWIVGEYAER	AAMIWIVGEYAER	2	AAMIWIVGEYAER2	7233.3	6192.32	6902.64
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	AAMMNLLR	AAMMNLLR	2	AAMMNLLR2	22814.7	18737.2	19119.1
Q76HN1	Q76HN1	HYAL1_RAT	Hyal1	Hyaluronidase-1	1	AAMPEPDFSGLAVIDWEAWRPR	AAMPEPDFSGLAVIDWEAWRPR	3	AAMPEPDFSGLAVIDWEAWRPR3	19634.5	19949.7	12130.2
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	AAMPPQIIQFPEDQK	AAMPPQIIQFPEDQK	2	AAMPPQIIQFPEDQK2	158427	150103	187784
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	AAMPPQIIQFPEDQK	AAMPPQIIQFPEDQK	3	AAMPPQIIQFPEDQK3	68601.2	79538.7	75057.6
D3ZVM5	D3ZVM5	D3ZVM5_RAT	Hspa12b	Heat shock protein family A (Hsp70) member 12B	1	AAMQFGDTEIK	AAMQFGDTEIK	2	AAMQFGDTEIK2	117868	86026.8	99322.3
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	AAMREFYFAEAQEADFSDPAFISK	AAMREFYFAEAQEADFSDPAFISK	3	AAMREFYFAEAQEADFSDPAFISK3	11169.1	8479.23	10003.2
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	AANAAENDFSVSQAEVSSR	AANAAENDFSVSQAEVSSR	2	AANAAENDFSVSQAEVSSR2	25734.5	23648.3	17359.1
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	AANAAENDFSVSQAEVSSR	AANAAENDFSVSQAEVSSR	3	AANAAENDFSVSQAEVSSR3	21109.4	23215.4	16202.9
Q5XIM5	Q5XIM5	CDV3_RAT	Cdv3	Protein CDV3 homolog	1	AANAASGAGGSSAAAGSR	AANAASGAGGSSAAAGSR	2	AANAASGAGGSSAAAGSR2			8701.64
Q5XIM5	Q5XIM5	CDV3_RAT	Cdv3	Protein CDV3 homolog	1	AANAASGAGGSSAAAGSRPGDGGSLGSGAR	AANAASGAGGSSAAAGSRPGDGGSLGSGAR	3	AANAASGAGGSSAAAGSRPGDGGSLGSGAR3	19385.1	24509	11206
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	AANAITK	AANAITK	1	AANAITK1	1207.27		45068.6
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	AANAYHVYQVYIR	AANAYHVYQVYIR	3	AANAYHVYQVYIR3	7518.71	9840.5	13648.7
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	AANEAGYFNEEMAPIEVK	AANEAGYFNEEMAPIEVK	3	AANEAGYFNEEMAPIEVK3	39628.1	18552	28209
Q62813	Q62813	LSAMP_RAT	Lsamp	Limbic system-associated membrane protein	1	AANEVSSADVK	AANEVSSADVK	2	AANEVSSADVK2	7139.3	3147	8140.21
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	AANFENHSGR	AANFENHSGR	2	AANFENHSGR2			115936
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	AANGADVPQGVIR	AANGADVPQGVIR	2	AANGADVPQGVIR2	17814.6	11603.9	16404.2
P17220	P17220	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	1	AANGVVLATEK	AANGVVLATEK	2	AANGVVLATEK2	1.80806e+06	1.76527e+06	2.03807e+06
P17220	P17220	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	1	AANGVVLATEKK	AANGVVLATEKK	2	AANGVVLATEKK2	15008.2	16944.7	20010.4
P17220	P17220	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	1	AANGVVLATEKK	AANGVVLATEKK	3	AANGVVLATEKK3	97092.2	148640	176454
Q9WUD9	Q9WUD9;F1LM93	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	0	AANILVGENLVCK	AANILVGENLVC(UniMod:4)K	2	AANILVGENLVC(UniMod:4)K2	369568	281605	339299
Q9WUD9	Q9WUD9;F1LM93	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	0	AANILVGENLVCK	AANILVGENLVC(UniMod:4)K	3	AANILVGENLVC(UniMod:4)K3	9095.26		4584.84
Q6AY57	Q6AY57	WIPI2_RAT	Wipi2	WD repeat domain phosphoinositide-interacting protein 2	1	AANMIPAHDSPLAALAFDASGTK	AANMIPAHDSPLAALAFDASGTK	3	AANMIPAHDSPLAALAFDASGTK3	15738.7	10060.7	
D3ZFQ8	D3ZFQ8	D3ZFQ8_RAT	Cyc1	Cytochrome c-1	1	AANNGALPPDLSYIVR	AANNGALPPDLSYIVR	2	AANNGALPPDLSYIVR2	85562.7	58442.4	86039.6
D3ZFQ8	D3ZFQ8	D3ZFQ8_RAT	Cyc1	Cytochrome c-1	1	AANNGALPPDLSYIVR	AANNGALPPDLSYIVR	3	AANNGALPPDLSYIVR3	13662.2	9135.54	8268.2
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	AANNGSAMVR	AANNGSAMVR	2	AANNGSAMVR2		3583.52	
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	AANPGCCLEDFVR	AANPGC(UniMod:4)C(UniMod:4)LEDFVR	2	AANPGC(UniMod:4)C(UniMod:4)LEDFVR2	173207	166180	174054
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	AANRDENEIIPPDHLNGVK	AANRDENEIIPPDHLNGVK	3	AANRDENEIIPPDHLNGVK3	10378.7	10062	11679
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	AANRDENEIIPPDHLNGVK	AANRDENEIIPPDHLNGVK	4	AANRDENEIIPPDHLNGVK4	44096.4	55329.9	41109.1
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	AANSLEAFIFETQDK	AANSLEAFIFETQDK	2	AANSLEAFIFETQDK2	109818	109913	173613
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	AANSLEAFIFETQDK	AANSLEAFIFETQDK	3	AANSLEAFIFETQDK3	51195.6	141294	80082.1
B0LT89	B0LT89	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	1	AANVLLSEHGEVK	AANVLLSEHGEVK	2	AANVLLSEHGEVK2	34895.8	29145.1	24550.4
B0LT89	B0LT89	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	1	AANVLLSEHGEVK	AANVLLSEHGEVK	3	AANVLLSEHGEVK3	48263.5	69561.1	43752.6
A0A8I6GBQ0	Q6V9V9;A0A8I6GBQ0	A0A8I6GBQ0_RAT	Stk26	Protein kinase domain-containing protein	0	AANVLLSEQGDVK	AANVLLSEQGDVK	2	AANVLLSEQGDVK2	52716.9	53444.3	56115.6
A0A8I6GBQ0	Q6V9V9;A0A8I6GBQ0	A0A8I6GBQ0_RAT	Stk26	Protein kinase domain-containing protein	0	AANVLLSEQGDVK	AANVLLSEQGDVK	3	AANVLLSEQGDVK3	6271.08	3161.33	
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	AANVLVSESLMCK	AANVLVSESLMC(UniMod:4)K	2	AANVLVSESLMC(UniMod:4)K2	618702	600459	721905
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	AANVLVSESLMCK	AANVLVSESLMC(UniMod:4)K	3	AANVLVSESLMC(UniMod:4)K3	34052.1	23376.2	31634.6
P08461	A0A8I6B5J2;P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	0	AAPAAAAAAPPGPR	AAPAAAAAAPPGPR	2	AAPAAAAAAPPGPR2	61939.6	57844.2	60607.8
P08461	A0A8I6B5J2;P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	0	AAPAAAAAAPPGPR	AAPAAAAAAPPGPR	3	AAPAAAAAAPPGPR3	21447.6	14207.6	24027.4
P10868	P10868	GAMT_RAT	Gamt	Guanidinoacetate N-methyltransferase	1	AAPAAYDTSDTHLQILGKPVMER	AAPAAYDTSDTHLQILGKPVMER	4	AAPAAYDTSDTHLQILGKPVMER4	14490.6	13452.9	6937.83
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	AAPAPPGCHR	AAPAPPGC(UniMod:4)HR	2	AAPAPPGC(UniMod:4)HR2	15155.2		62206.6
Q5U2V5	Q5U2V5	CRLS1_RAT	Crls1	Cardiolipin synthase (CMP-forming)	1	AAPEPAAGGDAAAQAPSAR	AAPEPAAGGDAAAQAPSAR	2	AAPEPAAGGDAAAQAPSAR2	11232.2	7598.56	10293.4
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	AAPFHSER	AAPFHSER	2	AAPFHSER2	15238	11909.7	
F7EPH4	F7EPH4	F7EPH4_RAT	Ppa1	inorganic diphosphatase	1	AAPFTLEYR	AAPFTLEYR	2	AAPFTLEYR2	24168.4	29217.8	32877.6
P36953	P36953	AFAM_RAT	Afm	Afamin	1	AAPITQYLK	AAPITQYLK	2	AAPITQYLK2	296910	331542	309631
B5DFI9	B5DFI9	B5DFI9_RAT	Pdk3	Protein-serine/threonine kinase	1	AAPLAGFGYGLPISR	AAPLAGFGYGLPISR	2	AAPLAGFGYGLPISR2	28861	33589.8	30019.3
P80385	P80385;D4A7E4	AAKG1_RAT	Prkag1	5'-AMP-activated protein kinase subunit gamma-1	0	AAPLWDSK	AAPLWDSK	2	AAPLWDSK2	44571.9	55727.1	56154.6
P20651	P20651	PP2BB_RAT	Ppp3cb	Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform	1	AAPPPPPPPPPPLGADR	AAPPPPPPPPPPLGADR	3	AAPPPPPPPPPPLGADR3	5098.36	2627.84	13004
Q6AYD4	Q6AYD4	ESAM_RAT	Esam	Endothelial cell-selective adhesion molecule	1	AAPPRPGTFTPTPSVSSQALSSPR	AAPPRPGTFTPTPSVSSQALSSPR	3	AAPPRPGTFTPTPSVSSQALSSPR3	149618	107885	154574
P36953	P36953	AFAM_RAT	Afm	Afamin	1	AAPQLPMEELVSLSK	AAPQLPMEELVSLSK	2	AAPQLPMEELVSLSK2	443198	409399	470067
P36953	P36953	AFAM_RAT	Afm	Afamin	1	AAPQLPMEELVSLSK	AAPQLPMEELVSLSK	3	AAPQLPMEELVSLSK3	8085.84	7518.21	10053
F1LXR9	F1LXR9	F1LXR9_RAT	Irag2	Inositol 1,4,5-triphosphate receptor associated 2	1	AAPQQEAGEELR	AAPQQEAGEELR	2	AAPQQEAGEELR2	15923.7		17736.7
P35446	P35446	SPON1_RAT	Spon1	Spondin-1	1	AAPSAEFSVDR	AAPSAEFSVDR	2	AAPSAEFSVDR2	23287.1	27805.4	24804.5
Q1HAQ0	Q1HAQ0	PCAT1_RAT	Lpcat1	Lysophosphatidylcholine acyltransferase 1	1	AAPSSSSGAGDAR	AAPSSSSGAGDAR	2	AAPSSSSGAGDAR2			55636.1
Q62848	Q62848	ARFG1_RAT	Arfgap1	ADP-ribosylation factor GTPase-activating protein 1	1	AAPSTAADEGWDNQNW	AAPSTAADEGWDNQNW	2	AAPSTAADEGWDNQNW2	11309.3	8725.66	4929.38
O35876	O35876	SMN_RAT	Smn1	Survival motor neuron protein	1	AAPWTSFLPPPPPVPGAGLGPGKPGLR	AAPWTSFLPPPPPVPGAGLGPGKPGLR	3	AAPWTSFLPPPPPVPGAGLGPGKPGLR3	28523.8	45527.4	25106.2
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	AAPYDWR	AAPYDWR	2	AAPYDWR2	1.49627e+06	1.33634e+06	1.47374e+06
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	AAQAAFQLGSPWR	AAQAAFQLGSPWR	2	AAQAAFQLGSPWR2	75859.4	85726.6	84569.9
Q8VHC1	Q8VHC1	Q8VHC1_RAT	Cst6	Cystatin E/M	1	AAQAAVASYNMDSNSLYYFR	AAQAAVASYNMDSNSLYYFR	3	AAQAAVASYNMDSNSLYYFR3	5179.69	3043.91	4464.91
Q6AYT0	Q6AYT0	QOR_RAT	Cryz	Quinone oxidoreductase	1	AAQAHEDIIHSSGK	AAQAHEDIIHSSGK	3	AAQAHEDIIHSSGK3	901.556	3002.42	
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	AAQALAK	AAQALAK	1	AAQALAK1	1175.04		4187.86
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	AAQASLSALNDPSAVEQALQEK	AAQASLSALNDPSAVEQALQEK	3	AAQASLSALNDPSAVEQALQEK3	23013.7	23905.4	30094.9
P32362	P32362	DCUP_RAT	Urod	Uroporphyrinogen decarboxylase (Fragment)	1	AAQDFFSTCR	AAQDFFSTC(UniMod:4)R	2	AAQDFFSTC(UniMod:4)R2	3704.64		
P62997	P62997	TRA2B_RAT	Tra2b	Transformer-2 protein homolog beta	1	AAQDRDQIYR	AAQDRDQIYR	3	AAQDRDQIYR3	13954.9	11971	10513.4
Q5PQX1	Q5PQX1	TOIP1_RAT	Tor1aip1	Torsin-1A-interacting protein 1	1	AAQDSDLVK	AAQDSDLVK	2	AAQDSDLVK2	23977.2	29476.5	16779.9
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	AAQDYLQEK	AAQDYLQEK	2	AAQDYLQEK2	7467.07	4314.21	8934.62
D3ZVN7	D3ZVN7	D3ZVN7_RAT	Ppox	Amine oxidase	1	AAQEAAATQLGLK	AAQEAAATQLGLK	2	AAQEAAATQLGLK2	785.172	3715.79	
P05065	Q6AY07;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	AAQEEYIK	AAQEEYIK	1	AAQEEYIK1	13913.1	15695	14249.5
P05065	Q6AY07;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	AAQEEYIK	AAQEEYIK	2	AAQEEYIK2	459792	444423	459663
P05065	Q6AY07;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	AAQEEYIKR	AAQEEYIKR	2	AAQEEYIKR2	20201.6	9064.31	9942.36
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	AAQEIGIK	AAQEIGIK	2	AAQEIGIK2	48058.4	51153	44009.5
Q7TQ20	Q7TQ20	DNJC2_RAT	Dnajc2	DnaJ homolog subfamily C member 2	1	AAQEQVLNASR	AAQEQVLNASR	2	AAQEQVLNASR2	6627.69	5072.79	4536.08
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	AAQFVDLLGYFSLK	AAQFVDLLGYFSLK	2	AAQFVDLLGYFSLK2	4028.54	3596.3	2367.53
P0DSP1	P0DSP1	SORL_RAT	Sorl1	Sortilin-related receptor	1	AAQFVTK	AAQFVTK	2	AAQFVTK2	23816.3		13455.6
D3ZG88	D3ZG88	D3ZG88_RAT	Znrd2	Zinc ribbon domain containing 2	1	AAQGPPLPAAPPNADVVASTQTALLQK	AAQGPPLPAAPPNADVVASTQTALLQK	3	AAQGPPLPAAPPNADVVASTQTALLQK3	10218.4	4063.8	6650.76
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	AAQIGAHTLSGACLDPAAFK	AAQIGAHTLSGAC(UniMod:4)LDPAAFK	3	AAQIGAHTLSGAC(UniMod:4)LDPAAFK3	54792.9	45062.8	55134.8
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	AAQLATEIADIK	AAQLATEIADIK	2	AAQLATEIADIK2	25760.3	23401.9	24885.4
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	AAQLCGAGMAAVVEK	AAQLC(UniMod:4)GAGMAAVVEK	2	AAQLC(UniMod:4)GAGMAAVVEK2	80869.4	67762.2	72033.8
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	AAQLCGAGMAAVVEK	AAQLC(UniMod:4)GAGMAAVVEK	3	AAQLC(UniMod:4)GAGMAAVVEK3	14339.8	15537.7	16125.7
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	AAQLDGLEAR	AAQLDGLEAR	2	AAQLDGLEAR2	7193.65		8809.85
D3ZRB3	D3ZRB3	D3ZRB3_RAT	Rhof	Ras homolog family member F, filopodia associated	1	AAQLEPITYTQGLSACEQMR	AAQLEPITYTQGLSAC(UniMod:4)EQMR	3	AAQLEPITYTQGLSAC(UniMod:4)EQMR3	8303.29	16365.8	15419.3
M0RDU0	M0RDU0	HAP40_RAT	F8a1	40-kDa huntingtin-associated protein	1	AAQLHLPLMPLAALQALGDAASCQLLAR	AAQLHLPLMPLAALQALGDAASC(UniMod:4)QLLAR	3	AAQLHLPLMPLAALQALGDAASC(UniMod:4)QLLAR3		21822.2	17976.7
Q5XIA1	Q5XIA1	NCLN_RAT	Ncln	BOS complex subunit NCLN	1	AAQLLDKDGTFLSTLEHFLSR	AAQLLDKDGTFLSTLEHFLSR	3	AAQLLDKDGTFLSTLEHFLSR3	1381.9	3455.59	5290.59
Q5XIA1	Q5XIA1	NCLN_RAT	Ncln	BOS complex subunit NCLN	1	AAQLLDKDGTFLSTLEHFLSR	AAQLLDKDGTFLSTLEHFLSR	4	AAQLLDKDGTFLSTLEHFLSR4	1863.78	2842.69	
F7ETN7	F7ETN7	F7ETN7_RAT	B4galt7	Beta-1,4-galactosyltransferase	1	AAQLPWEDGR	AAQLPWEDGR	2	AAQLPWEDGR2	26402.7	23315.1	28080.5
Q5XI42	Q5XI42	AL3B1_RAT	Aldh3b1	Aldehyde dehydrogenase family 3 member B1	1	AAQLQGLSHFLR	AAQLQGLSHFLR	3	AAQLQGLSHFLR3	3153.28	4685.46	4596.19
D4AEK9	D4AEK9	D4AEK9_RAT	Ccdc6	Coiled-coil domain containing 6	1	AAQLQHSEK	AAQLQHSEK	2	AAQLQHSEK2			5628.3
P50745	P50745	SH2B3_RAT	Sh2b3	SH2B adapter protein 3	1	AAQLVQLQGPDAHGVFLVR	AAQLVQLQGPDAHGVFLVR	3	AAQLVQLQGPDAHGVFLVR3		5881.56	
P50282	P50282	MMP9_RAT	Mmp9	Matrix metalloproteinase-9	1	AAQMMGEK	AAQMMGEK	2	AAQMMGEK2	14215.7	14156.3	7989.98
Q5XIH7	Q5XIH7	PHB2_RAT	Phb2	Prohibitin-2	1	AAQNISK	AAQNISK	1	AAQNISK1			5463.61
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	AAQNSGEADYIEK	AAQNSGEADYIEK	2	AAQNSGEADYIEK2	19049.7	21330.5	20156.9
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	AAQPPDGAAEPR	AAQPPDGAAEPR	2	AAQPPDGAAEPR2	38141.6	37984.7	52228.3
Q9R080	Q9R080	GPSM1_RAT	Gpsm1	G-protein-signaling modulator 1	1	AAQPSVTASPQTEEFFDLIASSQSR	AAQPSVTASPQTEEFFDLIASSQSR	3	AAQPSVTASPQTEEFFDLIASSQSR3	10971.7	18630.3	8713.89
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	AAQSTAMNR	AAQSTAMNR	2	AAQSTAMNR2			41221.5
Q5PPJ9	Q5PPJ9	SHLB2_RAT	Sh3glb2	Endophilin-B2	1	AAQTEFDR	AAQTEFDR	2	AAQTEFDR2	28507.7	24718.4	18940.2
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	AAQTELGQQILADFEEAFPSQGTK	AAQTELGQQILADFEEAFPSQGTK	3	AAQTELGQQILADFEEAFPSQGTK3	8512.9	9346.51	6216.71
Q9EQS0	Q9EQS0	TALDO_RAT	Taldo1	Transaldolase	1	AAQTSDLEK	AAQTSDLEK	2	AAQTSDLEK2	7668.43	11131.7	14479.5
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	AAQTSVAYGCIK	AAQTSVAYGC(UniMod:4)IK	2	AAQTSVAYGC(UniMod:4)IK2	47259.5	40950.9	37663.1
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	AAQTTIETAIHSLIETLK	AAQTTIETAIHSLIETLK	3	AAQTTIETAIHSLIETLK3	12048.4	11656.9	13506.9
P01015	P01015	ANGT_RAT	Agt	Angiotensinogen	1	AAQVAMIANFMGFR	AAQVAMIANFMGFR	2	AAQVAMIANFMGFR2	119977	110552	101801
P01015	P01015	ANGT_RAT	Agt	Angiotensinogen	1	AAQVAMIANFMGFR	AAQVAMIANFMGFR	3	AAQVAMIANFMGFR3	16236.1	14999.6	18273.6
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	AARPYVYDLIAVSNHYGAMGVGHYTAYAK	AARPYVYDLIAVSNHYGAMGVGHYTAYAK	4	AARPYVYDLIAVSNHYGAMGVGHYTAYAK4	3888.51		
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	AARVPQPACREPFLSCCK	AARVPQPAC(UniMod:4)REPFLSC(UniMod:4)C(UniMod:4)K	4	AARVPQPAC(UniMod:4)REPFLSC(UniMod:4)C(UniMod:4)K4	98273	201298	173807
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	AASAAFQENVGR	AASAAFQENVGR	2	AASAAFQENVGR2	30444.8	48415.5	28181.3
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	AASAAGASPAASPAAPESGTIPK	AASAAGASPAASPAAPESGTIPK	3	AASAAGASPAASPAAPESGTIPK3	7964.96	7232.59	6697.58
Q5I0K8	Q5I0K8	RT07_RAT	Mrps7	Small ribosomal subunit protein uS7m	1	AASAEEQATIER	AASAEEQATIER	2	AASAEEQATIER2	3430.6	3065.55	
Q6MG51	Q6MG51	CF047_RAT	G4	Uncharacterized protein C6orf47 homolog	1	AASAIQESAR	AASAIQESAR	2	AASAIQESAR2	28535.9	35442.1	33265.5
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	AASALKDVVK	AASALKDVVK	2	AASALKDVVK2	23134.4	31013.5	17008
P12368	P12368	KAP2_RAT	Prkar2a	cAMP-dependent protein kinase type II-alpha regulatory subunit	1	AASAYAVGDVK	AASAYAVGDVK	2	AASAYAVGDVK2	9975.95	3985.98	11900.8
P85971	P85971	6PGL_RAT	Pgls	6-phosphogluconolactonase	1	AASCLEGNR	AASC(UniMod:4)LEGNR	2	AASC(UniMod:4)LEGNR2	31760.2	28387.1	28605
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	AASDELSK	AASDELSK	1	AASDELSK1	15432.3	8637.29	5986.72
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	AASDELSK	AASDELSK	2	AASDELSK2	1.47287e+06	1.31903e+06	1.46934e+06
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	AASDGQYENQSPEATSPR	AASDGQYENQSPEATSPR	2	AASDGQYENQSPEATSPR2	2798.9	2262.95	
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	AASDGQYENQSPEATSPR	AASDGQYENQSPEATSPR	3	AASDGQYENQSPEATSPR3	5909.48		4301.6
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	AASDIAMTELPPTHPIR	AASDIAMTELPPTHPIR	2	AASDIAMTELPPTHPIR2	29397.4	38280.1	22394.2
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	AASDIAMTELPPTHPIR	AASDIAMTELPPTHPIR	3	AASDIAMTELPPTHPIR3	1.05551e+06	1.0852e+06	1.03611e+06
Q6Q0N0	Q6Q0N0	CSTN1_RAT	Clstn1	Calsyntenin-1	1	AASEFESPEGVSLFPELK	AASEFESPEGVSLFPELK	2	AASEFESPEGVSLFPELK2	12770.4	8541.17	15336
D3ZT64	D3ZT64	D3ZT64_RAT	Atg2a	Autophagy related 2A	1	AASEPEYTEILSFPSYSGSEASARPCAHLR	AASEPEYTEILSFPSYSGSEASARPC(UniMod:4)AHLR	4	AASEPEYTEILSFPSYSGSEASARPC(UniMod:4)AHLR4	7799.88	4928.2	8191.07
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	AASEQYIDTEK	AASEQYIDTEK	2	AASEQYIDTEK2		4892.1	3103.93
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	AASEYEEEIR	AASEYEEEIR	2	AASEYEEEIR2	136790	149181	159553
P55260	P55260	ANXA4_RAT	Anxa4	Annexin A4	1	AASGFNATEDAQVLR	AASGFNATEDAQVLR	2	AASGFNATEDAQVLR2	3013.58	5034.28	
Q499N5	Q499N5	ACSF2_RAT	Acsf2	Medium-chain acyl-CoA ligase ACSF2, mitochondrial	1	AASGLLSIGLR	AASGLLSIGLR	2	AASGLLSIGLR2	17346.2	26836	17593.8
P12075	P12075	COX5B_RAT	Cox5b	Cytochrome c oxidase subunit 5B, mitochondrial	1	AASGTKEDPNLVPSVSNK	AASGTKEDPNLVPSVSNK	2	AASGTKEDPNLVPSVSNK2	5870.29	6480.67	11292.6
P12075	P12075	COX5B_RAT	Cox5b	Cytochrome c oxidase subunit 5B, mitochondrial	1	AASGTKEDPNLVPSVSNK	AASGTKEDPNLVPSVSNK	3	AASGTKEDPNLVPSVSNK3	76247.7	74364	123708
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	AASHEQAAAALK	AASHEQAAAALK	2	AASHEQAAAALK2		2875.87	
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	AASHEQAAAALK	AASHEQAAAALK	3	AASHEQAAAALK3	55354.5	32887.4	
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	AASHILILK	AASHILILK	2	AASHILILK2		719.664	2603.16
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	AASIYSSWAEEQR	AASIYSSWAEEQR	2	AASIYSSWAEEQR2	18631.5	16395.4	14520.9
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	AASLDGFYNGR	AASLDGFYNGR	2	AASLDGFYNGR2	51195.2	44657.5	41554.7
B2GV15	B2GV15	B2GV15_RAT	Dbt	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	AASLGLLQFPILNASVDENCQSITYK	AASLGLLQFPILNASVDENC(UniMod:4)QSITYK	3	AASLGLLQFPILNASVDENC(UniMod:4)QSITYK3	5383.96	1281.05	3888.11
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	AASLNYLNQPNAAPLQTSR	AASLNYLNQPNAAPLQTSR	3	AASLNYLNQPNAAPLQTSR3	1486.38		8442.56
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	AASLTEDR	AASLTEDR	2	AASLTEDR2	252506	174870	146996
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	AASPPASASDLIEQQQK	AASPPASASDLIEQQQK	2	AASPPASASDLIEQQQK2	33013.3	30974.8	27621.3
F1LT13	F1LT13	F1LT13_RAT	Angel2	Angel homolog 2	1	AASPSICIANTHLLYNPR	AASPSIC(UniMod:4)IANTHLLYNPR	3	AASPSIC(UniMod:4)IANTHLLYNPR3	6718.71		7713.91
Q80Z70	Q80Z70	SE1L1_RAT	Sel1l	Protein sel-1 homolog 1	1	AASQGYTVAR	AASQGYTVAR	2	AASQGYTVAR2	9649.69	14706.4	26494.8
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	AASQNMIFPSPGSCAVLK	AASQNMIFPSPGSC(UniMod:4)AVLK	2	AASQNMIFPSPGSC(UniMod:4)AVLK2	15859.9	22517.3	21507.4
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	AASQNMIFPSPGSCAVLKK	AASQNMIFPSPGSC(UniMod:4)AVLKK	3	AASQNMIFPSPGSC(UniMod:4)AVLKK3	2032.63	4872.89	4808.95
P15087	P15087	CBPE_RAT	Cpe	Carboxypeptidase E	1	AASQPGELK	AASQPGELK	2	AASQPGELK2	13240	10975.6	15378.4
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	AASSANLLLR	AASSANLLLR	2	AASSANLLLR2	9187.53	12035.5	8221.9
Q3ZU82	Q3ZU82	GOGA5_RAT	Golga5	Golgin subfamily A member 5	1	AASSIDQFSIR	AASSIDQFSIR	2	AASSIDQFSIR2	6622.69	5446.81	6145.97
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	AASSIYINSR	AASSIYINSR	2	AASSIYINSR2	242570	220327	246709
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	AASSLNLSNGETESVK	AASSLNLSNGETESVK	2	AASSLNLSNGETESVK2	2802.23	1993.45	
A0A8I5ZKS4	A0A8I5ZKS4	A0A8I5ZKS4_RAT	Hycc1	Family with sequence similarity 126, member A	1	AASSTSQSGLSISSHNCSHK	AASSTSQSGLSISSHNC(UniMod:4)SHK	3	AASSTSQSGLSISSHNC(UniMod:4)SHK3	6080.06	6889.82	5211.61
A0A8I5ZKS4	A0A8I5ZKS4	A0A8I5ZKS4_RAT	Hycc1	Family with sequence similarity 126, member A	1	AASSTSQSGLSISSHNCSHK	AASSTSQSGLSISSHNC(UniMod:4)SHK	4	AASSTSQSGLSISSHNC(UniMod:4)SHK4	10479	9302.31	5520.26
F1LNT3	F1LNT3	F1LNT3_RAT	R3hdm1	R3H domain containing 1	1	AASTDLGAGEAVVGK	AASTDLGAGEAVVGK	2	AASTDLGAGEAVVGK2	7170.71	6413.37	
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	AASTTELPPEYLTSPLSQQSQLPPK	AASTTELPPEYLTSPLSQQSQLPPK	3	AASTTELPPEYLTSPLSQQSQLPPK3	12388.3	7420.67	5161.39
Q64361	Q64361	LXN_RAT	Lxn	Latexin	1	AASVAENCINYQQGTPNK	AASVAENC(UniMod:4)INYQQGTPNK	3	AASVAENC(UniMod:4)INYQQGTPNK3	6492.59	6218.41	3061.92
A0A1W2Q642	A0A1W2Q642	A0A1W2Q642_RAT	Pi16	Peptidase inhibitor 16	1	AASVSPEK	AASVSPEK	1	AASVSPEK1	158128		66368.8
A0A1W2Q642	A0A1W2Q642	A0A1W2Q642_RAT	Pi16	Peptidase inhibitor 16	1	AASVSPEK	AASVSPEK	2	AASVSPEK2	1.45517e+06		2.74524e+06
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	AASYFFDGSSYAVVR	AASYFFDGSSYAVVR	2	AASYFFDGSSYAVVR2	10096.5	9363.22	4827.7
Q5XIG8	Q5XIG8	STRAP_RAT	Strap	Serine-threonine kinase receptor-associated protein	1	AATAAADFTAK	AATAAADFTAK	2	AATAAADFTAK2	101619	71135.4	66978.3
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	AATADLEQYDR	AATADLEQYDR	2	AATADLEQYDR2	131199	130480	112401
Q66HG9	Q66HG9	MAVS_RAT	Mavs	Mitochondrial antiviral-signaling protein	1	AATCVSTK	AATC(UniMod:4)VSTK	1	AATC(UniMod:4)VSTK1			2668.18
Q66HG9	Q66HG9	MAVS_RAT	Mavs	Mitochondrial antiviral-signaling protein	1	AATCVSTK	AATC(UniMod:4)VSTK	2	AATC(UniMod:4)VSTK2			83157.9
D3ZVY9	D3ZVY9	D3ZVY9_RAT	Gng14	Guanine nucleotide-binding protein subunit gamma	1	AATDLLQFCTEQAK	AATDLLQFC(UniMod:4)TEQAK	2	AATDLLQFC(UniMod:4)TEQAK2	3205.37	4277.71	4862.09
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	AATECMCNLAMSK	AATEC(UniMod:4)MC(UniMod:4)NLAMSK	2	AATEC(UniMod:4)MC(UniMod:4)NLAMSK2	5948.59	3211.54	5507.19
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	AATEELLANK	AATEELLANK	2	AATEELLANK2	10521.7		6988.98
A0A8I6ABN1	A0A8I6ABN1	A0A8I6ABN1_RAT	Snx19	Sorting nexin 19	1	AATEKQALQSLMGLLPDI	AATEKQALQSLMGLLPDI	2	AATEKQALQSLMGLLPDI2	6239.66		
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	AATELAENR	AATELAENR	2	AATELAENR2	74327.4	100955	95405.8
P11980	A0A8I6AKN1;M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	AATESFASDPILYR	AATESFASDPILYR	2	AATESFASDPILYR2	23862.9	22550	13893.6
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	AATESFASDPILYRPVAVALDTK	AATESFASDPILYRPVAVALDTK	3	AATESFASDPILYRPVAVALDTK3	252619	205154	222535
Q64640	Q64640	ADK_RAT	Adk	Adenosine kinase	1	AATFFGCIGIDK	AATFFGC(UniMod:4)IGIDK	2	AATFFGC(UniMod:4)IGIDK2	9772.13	5780.86	3463.32
P67779	P67779;A0A8I5ZUY9	PHB1_RAT	Phb1	Prohibitin 1	0	AATFGLILDDVSLTHLTFGK	AATFGLILDDVSLTHLTFGK	3	AATFGLILDDVSLTHLTFGK3	24635.9	24963.4	15401.8
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	AATGEEVPR	AATGEEVPR	2	AATGEEVPR2	17243	11487.4	34955.6
Q5XIT9	Q5XIT9	MCCB_RAT	Mccc2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	1	AATGEEVSAEDLGGADLHCR	AATGEEVSAEDLGGADLHC(UniMod:4)R	3	AATGEEVSAEDLGGADLHC(UniMod:4)R3	20862.9	15705.3	13869.7
Q499P8	Q499P8	RUSF1_RAT	Rusf1	RUS family member 1	1	AATHGLILGALQEDGPLPGELAELR	AATHGLILGALQEDGPLPGELAELR	3	AATHGLILGALQEDGPLPGELAELR3	16500.1	18589.3	12688.3
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	AATITATSPGALWGLDR	AATITATSPGALWGLDR	2	AATITATSPGALWGLDR2	842833	833158	840011
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	AATITATSPGALWGLDR	AATITATSPGALWGLDR	3	AATITATSPGALWGLDR3	56397.8	58438	67690.1
P12368	P12368	KAP2_RAT	Prkar2a	cAMP-dependent protein kinase type II-alpha regulatory subunit	1	AATIVATSDGSLWGLDR	AATIVATSDGSLWGLDR	2	AATIVATSDGSLWGLDR2	10120.7	9321.4	7187.52
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	AATLELSEVK	AATLELSEVK	2	AATLELSEVK2	10767.6	8952.09	13609.4
Q68FQ2	Q68FQ2	JAM3_RAT	Jam3	Junctional adhesion molecule C	1	AATLQCQESEGYPR	AATLQC(UniMod:4)QESEGYPR	2	AATLQC(UniMod:4)QESEGYPR2	1064.93		
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	AATPDFR	AATPDFR	2	AATPDFR2	65169.2	83569.3	75871.2
A0A8I6AI94	D4AD48;A0A8I6AI94	A0A8I6AI94_RAT	Dcun1d1	DCN1-like protein	0	AATQCEFSK	AATQC(UniMod:4)EFSK	2	AATQC(UniMod:4)EFSK2	8490.77	7191.69	8102.72
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	AATSPALFNR	AATSPALFNR	2	AATSPALFNR2	254984	268680	253044
A0A8I5Y661	A0A8I5Y661	A0A8I5Y661_RAT	Fam177a1	Family with sequence similarity 177, member A1	1	AATSTLSVCDFLGEK	AATSTLSVC(UniMod:4)DFLGEK	2	AATSTLSVC(UniMod:4)DFLGEK2	37311.2	38474.8	36065.7
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	AATWLTHQGSFQGGFR	AATWLTHQGSFQGGFR	2	AATWLTHQGSFQGGFR2	375554	283563	297124
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	AATWLTHQGSFQGGFR	AATWLTHQGSFQGGFR	3	AATWLTHQGSFQGGFR3	196049	224048	214567
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	AATWLTHQGSFQGGFR	AATWLTHQGSFQGGFR	4	AATWLTHQGSFQGGFR4	9672.25		8954
Q9QWE9	Q9QWE9	GGT5_RAT	Ggt5	Glutathione hydrolase 5 proenzyme	1	AAVAADSK	AAVAADSK	1	AAVAADSK1			4994.26
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	AAVACLR	AAVAC(UniMod:4)LR	2	AAVAC(UniMod:4)LR2	15053.8	17377.5	15984.6
G3V9R8	G3V9R8	HNRPC_RAT	Hnrnpc	Heterogeneous nuclear ribonucleoprotein C	1	AAVAGEDGR	AAVAGEDGR	2	AAVAGEDGR2			9023.99
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	AAVAGLDR	AAVAGLDR	2	AAVAGLDR2	23529.6	33432.9	34061.1
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	AAVASLLQSVQVPEFTPK	AAVASLLQSVQVPEFTPK	2	AAVASLLQSVQVPEFTPK2	171400	121093	123090
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	AAVASLLQSVQVPEFTPK	AAVASLLQSVQVPEFTPK	3	AAVASLLQSVQVPEFTPK3	73881.6	73430.6	77960.3
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	AAVASVTPEK	AAVASVTPEK	2	AAVASVTPEK2	410263	424728	434296
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	AAVAVPSRPPDAVLR	AAVAVPSRPPDAVLR	3	AAVAVPSRPPDAVLR3	385798	423623	384991
F1M7Z1	F1M7Z1	F1M7Z1_RAT	Edc3	Enhancer of mRNA-decapping protein 3	1	AAVAWANQNR	AAVAWANQNR	2	AAVAWANQNR2	43743.6	29783.3	33361.8
P12711	P12711	ADHX_RAT	Adh5	Alcohol dehydrogenase class-3	1	AAVAWEAGKPLSIEEIEVAPPQAHEVR	AAVAWEAGKPLSIEEIEVAPPQAHEVR	4	AAVAWEAGKPLSIEEIEVAPPQAHEVR4	49583.8	47309	62395.9
B0BNC9	B0BNC9	QORL2_RAT		Quinone oxidoreductase-like protein 2	1	AAVCTELK	AAVC(UniMod:4)TELK	2	AAVC(UniMod:4)TELK2	5268.6	4502.41	
P13803	P13803	ETFA_RAT	Etfa	Electron transfer flavoprotein subunit alpha, mitochondrial	1	AAVDAGFVPNDMQVGQTGK	AAVDAGFVPNDMQVGQTGK	2	AAVDAGFVPNDMQVGQTGK2	109812	118118	128442
P13803	P13803	ETFA_RAT	Etfa	Electron transfer flavoprotein subunit alpha, mitochondrial	1	AAVDAGFVPNDMQVGQTGK	AAVDAGFVPNDMQVGQTGK	3	AAVDAGFVPNDMQVGQTGK3	37639	36767.9	40436.8
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	AAVDDDASGWELNVPEK	AAVDDDASGWELNVPEK	2	AAVDDDASGWELNVPEK2	6790.09	8443.19	5919.84
Q32PX2	Q32PX2	AIMP2_RAT	Aimp2	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2	1	AAVDGLSK	AAVDGLSK	2	AAVDGLSK2	44863.2	54347	35333.3
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	AAVDLCGR	AAVDLC(UniMod:4)GR	2	AAVDLC(UniMod:4)GR2	30768.2	39613.2	29662.8
Q4V8B7	Q4V8B7	HSDL1_RAT	Hsdl1	Inactive hydroxysteroid dehydrogenase-like protein 1	1	AAVDSFYLLYR	AAVDSFYLLYR	2	AAVDSFYLLYR2	2840.06		
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	AAVEEGIVLGGGCALLR	AAVEEGIVLGGGC(UniMod:4)ALLR	2	AAVEEGIVLGGGC(UniMod:4)ALLR2	460168	409470	473490
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	AAVEEGIVLGGGCALLR	AAVEEGIVLGGGC(UniMod:4)ALLR	3	AAVEEGIVLGGGC(UniMod:4)ALLR3	63045.6	45711.2	63858.4
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	AAVELALLGAR	AAVELALLGAR	2	AAVELALLGAR2	8731.97	12193.8	4697.01
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	AAVELIEK	AAVELIEK	2	AAVELIEK2	51598.4	56378.1	44802.6
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	AAVENLPTFLVELSR	AAVENLPTFLVELSR	2	AAVENLPTFLVELSR2	325963	356451	298444
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	AAVENLPTFLVELSR	AAVENLPTFLVELSR	3	AAVENLPTFLVELSR3	54901.4	54795.7	56461.5
P35738	P35738	ODBB_RAT	Bckdhb	2-oxoisovalerate dehydrogenase subunit beta, mitochondrial	1	AAVEQVPVEPYK	AAVEQVPVEPYK	2	AAVEQVPVEPYK2	11526.9	8607.35	7877.46
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	AAVESLGFILFR	AAVESLGFILFR	2	AAVESLGFILFR2	58791.1	93220.4	96392.7
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	AAVETLGVPCFLGGMSR	AAVETLGVPC(UniMod:4)FLGGMSR	2	AAVETLGVPC(UniMod:4)FLGGMSR2	136651	178368	154763
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	AAVETLGVPCFLGGMSR	AAVETLGVPC(UniMod:4)FLGGMSR	3	AAVETLGVPC(UniMod:4)FLGGMSR3	21395.6	31041.7	31453.3
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	AAVEVFEK	AAVEVFEK	2	AAVEVFEK2	85317.7	105916	110073
F1M7Z1	F1M7Z1	F1M7Z1_RAT	Edc3	Enhancer of mRNA-decapping protein 3	1	AAVFEEIDTYER	AAVFEEIDTYER	2	AAVFEEIDTYER2	12391.4	10291.3	13057.9
F1M7Z1	F1M7Z1	F1M7Z1_RAT	Edc3	Enhancer of mRNA-decapping protein 3	1	AAVFEEIDTYERR	AAVFEEIDTYERR	3	AAVFEEIDTYERR3	5620.12		7810.04
P01026	P01026	CO3_RAT	C3	Complement C3	1	AAVFNHFISDGVK	AAVFNHFISDGVK	2	AAVFNHFISDGVK2	189237	124545	127554
P01026	P01026	CO3_RAT	C3	Complement C3	1	AAVFNHFISDGVK	AAVFNHFISDGVK	3	AAVFNHFISDGVK3	2.95803e+06	2.71528e+06	2.52773e+06
P01026	P01026	CO3_RAT	C3	Complement C3	1	AAVFNHFISDGVKK	AAVFNHFISDGVKK	2	AAVFNHFISDGVKK2	15156.6	7678.98	7908.66
P01026	P01026	CO3_RAT	C3	Complement C3	1	AAVFNHFISDGVKK	AAVFNHFISDGVKK	3	AAVFNHFISDGVKK3	981070	1.01244e+06	815984
P01026	P01026	CO3_RAT	C3	Complement C3	1	AAVFNHFISDGVKK	AAVFNHFISDGVKK	4	AAVFNHFISDGVKK4	703797	851427	679127
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	AAVGKEEIQER	AAVGKEEIQER	3	AAVGKEEIQER3	13461.3	19269.3	24185.7
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	AAVGLTGNDIATPPNK	AAVGLTGNDIATPPNK	2	AAVGLTGNDIATPPNK2	40765.1	43791.9	40801.5
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	AAVHLEGK	AAVHLEGK	1	AAVHLEGK1	5054.21	6220.69	4142.86
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	AAVHLEGK	AAVHLEGK	2	AAVHLEGK2	276787	178310	340312
P12928	P12928	KPYR_RAT	Pklr	Pyruvate kinase PKLR	1	AAVIAVTR	AAVIAVTR	2	AAVIAVTR2	22730.1	39017.1	26616
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	AAVIFADTLTLLFEGIAR	AAVIFADTLTLLFEGIAR	3	AAVIFADTLTLLFEGIAR3		2940.29	6207.75
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	AAVLDAVK	AAVLDAVK	2	AAVLDAVK2	12815.8	14432.5	8782.6
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	AAVLDLEK	AAVLDLEK	2	AAVLDLEK2	96078.4	98933.8	80422.1
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	AAVLFQQVK	AAVLFQQVK	2	AAVLFQQVK2	44928.1	24792.3	36379.5
P02091	P02091	HBB1_RAT	Hbb	Hemoglobin subunit beta-1	1	AAVNGLWGK	AAVNGLWGK	1	AAVNGLWGK1	11859.3	5679.31	9648.24
P02091	P02091	HBB1_RAT	Hbb	Hemoglobin subunit beta-1	1	AAVNGLWGK	AAVNGLWGK	2	AAVNGLWGK2	648950	638518	650202
M0RAK0	M0RAK0	M0RAK0_RAT	Proser2	Proline and serine rich 2	1	AAVNVQER	AAVNVQER	2	AAVNVQER2	128824	129652	103565
P06685	P06687;P06685;P06686	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	0	AAVPDAVGK	AAVPDAVGK	1	AAVPDAVGK1	3411.49		
P06685	P06687;P06685;P06686	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	0	AAVPDAVGK	AAVPDAVGK	2	AAVPDAVGK2	177204	201759	206649
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	AAVPGVDGLDIQQELSSLSVGPSLHK	AAVPGVDGLDIQQELSSLSVGPSLHK	3	AAVPGVDGLDIQQELSSLSVGPSLHK3	11214.7	11403.7	7102.31
P04764	M0R5J4;P15429;A0A8I6AB47;P04764;P07323	ENOA_RAT	Eno1	Alpha-enolase	0	AAVPSGASTGIYEALELR	AAVPSGASTGIYEALELR	2	AAVPSGASTGIYEALELR2	51590.7	50733.6	40613.2
P04764	M0R5J4;P15429;A0A8I6AB47;P04764;P07323	ENOA_RAT	Eno1	Alpha-enolase	0	AAVPSGASTGIYEALELR	AAVPSGASTGIYEALELR	3	AAVPSGASTGIYEALELR3	48053.1	52920.6	41165.1
F1MAF8	F1MAF8	F1MAF8_RAT	Atg2b	Autophagy related 2B	1	AAVQEKEEEPVIK	AAVQEKEEEPVIK	3	AAVQEKEEEPVIK3	5527.51	5581.23	9599.96
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	AAVQLLQEQEAR	AAVQLLQEQEAR	2	AAVQLLQEQEAR2	4325.78	3911.88	5512.41
D3ZKG1	D3ZKG1	D3ZKG1_RAT	Mmut	Methylmalonyl-CoA mutase, mitochondrial	1	AAVQVLDDIEK	AAVQVLDDIEK	2	AAVQVLDDIEK2	11823.8		15696.2
G3V8S6	G3V8S6	G3V8S6_RAT	Hrc	Histidine rich calcium binding protein	1	AAVSAPLSHHR	AAVSAPLSHHR	2	AAVSAPLSHHR2	14494.2		
G3V8S6	G3V8S6	G3V8S6_RAT	Hrc	Histidine rich calcium binding protein	1	AAVSAPLSHHR	AAVSAPLSHHR	3	AAVSAPLSHHR3	167228	152252	138934
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	AAVSEQDSLNNNESCLSSCEAAPR	AAVSEQDSLNNNESC(UniMod:4)LSSC(UniMod:4)EAAPR	3	AAVSEQDSLNNNESC(UniMod:4)LSSC(UniMod:4)EAAPR3	13864.2	9149.32	15326.5
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	AAVSNGIIER	AAVSNGIIER	2	AAVSNGIIER2	1.3001e+06	1.70577e+06	1.54024e+06
Q8R553	Q8R553	CSTN3_RAT	Clstn3	Calsyntenin-3	1	AAVTEGK	AAVTEGK	1	AAVTEGK1			58411.3
Q6P752	Q6P752	TOIP2_RAT	Tor1aip2	Torsin-1A-interacting protein 2	1	AAVVHHFESLPAGSTLIFYK	AAVVHHFESLPAGSTLIFYK	3	AAVVHHFESLPAGSTLIFYK3	12238	7034.49	8154.29
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	AAVVTTAILIAR	AAVVTTAILIAR	2	AAVVTTAILIAR2	128897	102829	88045.5
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	AAVWTDSR	AAVWTDSR	2	AAVWTDSR2	176965	214479	184439
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	AAVYLQAAWR	AAVYLQAAWR	2	AAVYLQAAWR2	27701.6	23905	27523.1
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	AAWDHMK	AAWDHMK	2	AAWDHMK2	34171.9	25403.4	36487.3
A0A8I6AVZ7	A0A8I6AVZ7	A0A8I6AVZ7_RAT	Mtcl1	Microtubule crosslinking factor 1	1	AAWDVEWAVLK	AAWDVEWAVLK	2	AAWDVEWAVLK2	1508.54	1534.56	
Q4QQS7	Q4QQS7	Q4QQS7_RAT	Umps	Uridine 5'-monophosphate synthase	1	AAWEAYLSR	AAWEAYLSR	2	AAWEAYLSR2	5553.67		2137.46
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	AAWEVDSGR	AAWEVDSGR	2	AAWEVDSGR2	26316.9	22587	20535.2
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	AAWEVDSGRR	AAWEVDSGRR	2	AAWEVDSGRR2	2410.22	4129.55	1210.41
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	AAWEVDSGRR	AAWEVDSGRR	3	AAWEVDSGRR3	218643	204439	241006
Q04400	Q04400	ADCY5_RAT	Adcy5	Adenylate cyclase type 5	1	AAWGEADSR	AAWGEADSR	2	AAWGEADSR2	12819.4	14981.9	4394.56
A0A0U1RS29	A0A0U1RS29	A0A0U1RS29_RAT	Rgl2	Ral guanine nucleotide dissociation stimulator-like 2	1	AAWGETTR	AAWGETTR	2	AAWGETTR2	20998.9	14628	20774.9
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	AAWVNEIR	AAWVNEIR	2	AAWVNEIR2	27688	24722.2	23950.4
Q63448	Q63448	ACOX3_RAT	Acox3	Peroxisomal acyl-coenzyme A oxidase 3	1	AAWWPEFTANK	AAWWPEFTANK	2	AAWWPEFTANK2	32014.2	39499.5	56574.6
G3V9M3	G3V9M3	G3V9M3_RAT	Wdr47	WD repeat domain 47	1	AAYADLLTPLISK	AAYADLLTPLISK	2	AAYADLLTPLISK2	5049.65	6068.84	6015.35
D4ADG2	D4ADG2	D4ADG2_RAT	Iba57	Iron-sulfur cluster assembly factor IBA57	1	AAYAHFLNVQGR	AAYAHFLNVQGR	3	AAYAHFLNVQGR3	7368.02	4837.4	4393.46
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	AAYCACR	AAYC(UniMod:4)AC(UniMod:4)R	2	AAYC(UniMod:4)AC(UniMod:4)R2	60685.6		37161.4
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	AAYCACRPGFHTVPGQPGCQDINECLR	AAYC(UniMod:4)AC(UniMod:4)RPGFHTVPGQPGC(UniMod:4)QDINEC(UniMod:4)LR	4	AAYC(UniMod:4)AC(UniMod:4)RPGFHTVPGQPGC(UniMod:4)QDINEC(UniMod:4)LR4	61691.1	72751.7	76346.2
A0A096MJT6	A0A096MJT6	A0A096MJT6_RAT	Bltp1	Similar to RIKEN cDNA D630029K19	1	AAYDNWNEQR	AAYDNWNEQR	2	AAYDNWNEQR2	1695.19		
Q62796	Q62796;A0A096MJZ5	RBP1_RAT	Ralbp1	RalA-binding protein 1	0	AAYDREESPNLEEYEPNTVASLLK	AAYDREESPNLEEYEPNTVASLLK	3	AAYDREESPNLEEYEPNTVASLLK3	9978.53	6399.55	13552.4
Q5EGY4	Q5EGY4	YKT6_RAT	Ykt6	Synaptobrevin homolog YKT6	1	AAYDVSSFSFFQR	AAYDVSSFSFFQR	2	AAYDVSSFSFFQR2	29163.6	27445	15754.4
P20909	P20909	COBA1_RAT	Col11a1	Collagen alpha-1(XI) chain	1	AAYDYCDHYSPDCDLTSK	AAYDYC(UniMod:4)DHYSPDC(UniMod:4)DLTSK	3	AAYDYC(UniMod:4)DHYSPDC(UniMod:4)DLTSK3	50824	48326	36341.5
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	AAYEAELGDAR	AAYEAELGDAR	2	AAYEAELGDAR2	19920.4	17894.3	24916.2
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	AAYEAELGDARK	AAYEAELGDARK	3	AAYEAELGDARK3	12302.3	15002.1	17266.5
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	AAYEALGQFCCALHK	AAYEALGQFC(UniMod:4)C(UniMod:4)ALHK	3	AAYEALGQFC(UniMod:4)C(UniMod:4)ALHK3	3404.2	6150.51	3824
Q09073	A0A8I5Y643;A0A8I6A075;Q09073	ADT2_RAT	Slc25a5	ADP/ATP translocase 2	0	AAYFGIYDTAK	AAYFGIYDTAK	2	AAYFGIYDTAK2	924003	954031	1.04501e+06
Q05962	Q05962	ADT1_RAT	Slc25a4	ADP/ATP translocase 1	1	AAYFGVYDTAK	AAYFGVYDTAK	2	AAYFGVYDTAK2	247121	253544	286081
D4ABB8	D4ABB8	ATP9B_RAT	Atp9b	Probable phospholipid-transporting ATPase IIB	1	AAYGWMIMK	AAYGWMIMK	2	AAYGWMIMK2	5665.89	9279.51	
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	AAYIYIR	AAYIYIR	2	AAYIYIR2	110037	96514	120574
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	AAYLDDLR	AAYLDDLR	2	AAYLDDLR2	25566.4	24625.3	20330.4
B0BNA5	B0BNA5	COTL1_RAT	Cotl1	Coactosin-like protein	1	AAYNLVR	AAYNLVR	2	AAYNLVR2	510240	475632	488098
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	AAYPDLENPPLVVTPSQQPK	AAYPDLENPPLVVTPSQQPK	3	AAYPDLENPPLVVTPSQQPK3	20130.8	20220	39752.6
P52759	P52759	RIDA_RAT	Rida	2-iminobutanoate/2-iminopropanoate deaminase	1	AAYQVAALPK	AAYQVAALPK	2	AAYQVAALPK2	12702.3	8960.4	4948.54
Q9R085	Q9R085;Q5D006;B2GUZ1	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	0	AAYVLFYQR	AAYVLFYQR	2	AAYVLFYQR2	216306	279361	252124
D4ABB8	D4ABB8	ATP9B_RAT	Atp9b	Probable phospholipid-transporting ATPase IIB	1	AAYYSAVGPGPGADRR	AAYYSAVGPGPGADRR	3	AAYYSAVGPGPGADRR3	3466.58		4943.6
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	ACACAHGMLAEDGASCR	AC(UniMod:4)AC(UniMod:4)AHGMLAEDGASC(UniMod:4)R	2	AC(UniMod:4)AC(UniMod:4)AHGMLAEDGASC(UniMod:4)R2	4970.25	5340.17	2384.54
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	ACACAHGMLAEDGASCR	AC(UniMod:4)AC(UniMod:4)AHGMLAEDGASC(UniMod:4)R	3	AC(UniMod:4)AC(UniMod:4)AHGMLAEDGASC(UniMod:4)R3	17707.3	18195	39021.2
P54311	P54311	GBB1_RAT	Gnb1	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1	1	ACADATLSQITNNIDPVGR	AC(UniMod:4)ADATLSQITNNIDPVGR	3	AC(UniMod:4)ADATLSQITNNIDPVGR3	159249	127247	123632
D3ZG88	D3ZG88	D3ZG88_RAT	Znrd2	Zinc ribbon domain containing 2	1	ACAEALGSLK	AC(UniMod:4)AEALGSLK	2	AC(UniMod:4)AEALGSLK2	11964.7	9265.36	11718.9
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	ACAECFMAVSCATCQEIR	AC(UniMod:4)AEC(UniMod:4)FMAVSC(UniMod:4)ATC(UniMod:4)QEIR	3	AC(UniMod:4)AEC(UniMod:4)FMAVSC(UniMod:4)ATC(UniMod:4)QEIR3	1755.03	4480.14	6488.42
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	ACAEIAAQR	AC(UniMod:4)AEIAAQR	2	AC(UniMod:4)AEIAAQR2	16647.4	27609.4	20688.2
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	ACAELHQNVNVK	AC(UniMod:4)AELHQNVNVK	2	AC(UniMod:4)AELHQNVNVK2	1208.03		
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	ACAELHQNVNVK	AC(UniMod:4)AELHQNVNVK	3	AC(UniMod:4)AELHQNVNVK3	40488.8	35987.3	21230.2
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	ACAEQIVTK	AC(UniMod:4)AEQIVTK	2	AC(UniMod:4)AEQIVTK2	96128.8	103038	90737.4
Q5XI39	A0A8I6A215;Q5XI39	Q5XI39_RAT	Cryzl1	Crystallin zeta like 1	0	ACALSHINTK	AC(UniMod:4)ALSHINTK	2	AC(UniMod:4)ALSHINTK2	1074.17		2534.08
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	ACALSIAESCRPGDKVPPIK	AC(UniMod:4)ALSIAESC(UniMod:4)RPGDKVPPIK	4	AC(UniMod:4)ALSIAESC(UniMod:4)RPGDKVPPIK4	21869	31362.5	22060.3
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	ACASDSQSSVGK	AC(UniMod:4)ASDSQSSVGK	2	AC(UniMod:4)ASDSQSSVGK2			19111.1
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	ACASPER	AC(UniMod:4)ASPER	2	AC(UniMod:4)ASPER2			75172.7
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	ACCGVPCK	AC(UniMod:4)C(UniMod:4)GVPC(UniMod:4)K	2	AC(UniMod:4)C(UniMod:4)GVPC(UniMod:4)K2	5926.12	2921.18	
Q4G063	Q4G063	CREL2_RAT	Creld2	Protein disulfide isomerase Creld2	1	ACCLPGTYGPDCK	AC(UniMod:4)C(UniMod:4)LPGTYGPDC(UniMod:4)K	2	AC(UniMod:4)C(UniMod:4)LPGTYGPDC(UniMod:4)K2	205164	191484	159592
P15800	P15800;D3ZQN7	LAMB2_RAT	Lamb2	Laminin subunit beta-2	0	ACDCDPR	AC(UniMod:4)DC(UniMod:4)DPR	2	AC(UniMod:4)DC(UniMod:4)DPR2			30884.6
F1MAA4	F1MAA4	F1MAA4_RAT	Atp13a2	ATPase cation transporting 13A2	1	ACDDIHCSSSGLSLQDQAVR	AC(UniMod:4)DDIHC(UniMod:4)SSSGLSLQDQAVR	3	AC(UniMod:4)DDIHC(UniMod:4)SSSGLSLQDQAVR3	6286.98	2929.69	3244.71
P12007	P12007	IVD_RAT	Ivd	Isovaleryl-CoA dehydrogenase, mitochondrial	1	ACDEGHITAK	AC(UniMod:4)DEGHITAK	2	AC(UniMod:4)DEGHITAK2	5245.18		2111.76
A0A8I5Y4X4	A0A8I5Y4X4	A0A8I5Y4X4_RAT	Nub1	Negative regulator of ubiquitin-like proteins 1	1	ACDGNVDHAATHISNR	AC(UniMod:4)DGNVDHAATHISNR	3	AC(UniMod:4)DGNVDHAATHISNR3	27056.1	35672.1	22133.5
A0A8I5Y4X4	A0A8I5Y4X4	A0A8I5Y4X4_RAT	Nub1	Negative regulator of ubiquitin-like proteins 1	1	ACDGNVDHAATHISNR	AC(UniMod:4)DGNVDHAATHISNR	4	AC(UniMod:4)DGNVDHAATHISNR4	16678.1	22272.7	20716
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	ACDGVNDCGDQSDELCCK	AC(UniMod:4)DGVNDC(UniMod:4)GDQSDELC(UniMod:4)C(UniMod:4)K	3	AC(UniMod:4)DGVNDC(UniMod:4)GDQSDELC(UniMod:4)C(UniMod:4)K3	46211.3	44414.8	52145.7
D4AC65	D4AC65	D4AC65_RAT	Coa7	Cytochrome c oxidase assembly factor 7	1	ACDLGHVWACANASR	AC(UniMod:4)DLGHVWAC(UniMod:4)ANASR	3	AC(UniMod:4)DLGHVWAC(UniMod:4)ANASR3	4228.74		6752.2
D3ZSM9	D3ZSM9	D3ZSM9_RAT	Brat1	BRCA1-associated ATM activator 1	1	ACDLLLFLR	AC(UniMod:4)DLLLFLR	2	AC(UniMod:4)DLLLFLR2	1764.68	4331.8	2318.67
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	ACDLPAWVHFPDTER	AC(UniMod:4)DLPAWVHFPDTER	2	AC(UniMod:4)DLPAWVHFPDTER2	3348.95	2438.71	
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	ACDLPAWVHFPDTER	AC(UniMod:4)DLPAWVHFPDTER	3	AC(UniMod:4)DLPAWVHFPDTER3	62838.7	62721.5	59474.2
Q6MG06	Q6MG06	GNL1_RAT	Gnl1	Guanine nucleotide-binding protein-like 1	1	ACEAITVGK	AC(UniMod:4)EAITVGK	2	AC(UniMod:4)EAITVGK2	16342	17727.7	6310.4
D3ZGB8	D3ZGB8	D3ZGB8_RAT	Cilp	Cartilage intermediate layer protein	1	ACEEAPPSAAHFR	AC(UniMod:4)EEAPPSAAHFR	2	AC(UniMod:4)EEAPPSAAHFR2	1467.54	3852.36	
D3ZGB8	D3ZGB8	D3ZGB8_RAT	Cilp	Cartilage intermediate layer protein	1	ACEEAPPSAAHFR	AC(UniMod:4)EEAPPSAAHFR	3	AC(UniMod:4)EEAPPSAAHFR3	49820.6	52316.5	31532.5
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ACEFAGFQCQIQFGPHNEQK	AC(UniMod:4)EFAGFQC(UniMod:4)QIQFGPHNEQK	3	AC(UniMod:4)EFAGFQC(UniMod:4)QIQFGPHNEQK3	1.05588e+06	985887	1.0474e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ACEFAGFQCQIQFGPHNEQK	AC(UniMod:4)EFAGFQC(UniMod:4)QIQFGPHNEQK	4	AC(UniMod:4)EFAGFQC(UniMod:4)QIQFGPHNEQK4		5969.82	11161.8
D4A3I5	D4A3I5	D4A3I5_RAT	Fhip2a	FHF complex subunit HOOK interacting protein 2A	1	ACEGLMLLVSLPEPAAAK	AC(UniMod:4)EGLMLLVSLPEPAAAK	2	AC(UniMod:4)EGLMLLVSLPEPAAAK2	14645.5	10887.6	3120.4
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	ACEHITSNVLPLLLEQFHK	AC(UniMod:4)EHITSNVLPLLLEQFHK	3	AC(UniMod:4)EHITSNVLPLLLEQFHK3	5361.2	3309.28	4137.18
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	ACEHITSNVLPLLLEQFHK	AC(UniMod:4)EHITSNVLPLLLEQFHK	4	AC(UniMod:4)EHITSNVLPLLLEQFHK4	30291.7	27383.5	23000.2
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	ACELFLR	AC(UniMod:4)ELFLR	2	AC(UniMod:4)ELFLR2	34859.2	33409.5	26494.6
P01026	P01026	CO3_RAT	C3	Complement C3	1	ACEPGVDYVYK	AC(UniMod:4)EPGVDYVYK	2	AC(UniMod:4)EPGVDYVYK2	3.09943e+06	2.96383e+06	2.97035e+06
D3ZUN5	D3ZUN5	D3ZUN5_RAT	Pofut2	GDP-fucose protein O-fucosyltransferase 2	1	ACEQPTHWK	AC(UniMod:4)EQPTHWK	3	AC(UniMod:4)EQPTHWK3		7362.77	14163.5
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	ACEVALEEIK	AC(UniMod:4)EVALEEIK	2	AC(UniMod:4)EVALEEIK2	14739.9	31888	21332.1
A0A8I5ZZT4	A0A8I5ZZT4	A0A8I5ZZT4_RAT	Pstpip2	Proline-serine-threonine phosphatase-interacting protein 2	1	ACEVFEAQECER	AC(UniMod:4)EVFEAQEC(UniMod:4)ER	2	AC(UniMod:4)EVFEAQEC(UniMod:4)ER2	3117.56	3577.52	3738.53
D3ZSN4	D3ZSN4	D3ZSN4_RAT	Zfp330	Zinc finger protein 330	1	ACFCDEHTR	AC(UniMod:4)FC(UniMod:4)DEHTR	3	AC(UniMod:4)FC(UniMod:4)DEHTR3	47051.4	74848.6	44177.9
Q3MID3	Q3MID3	ARFG2_RAT	Arfgap2	ADP-ribosylation factor GTPase-activating protein 2	1	ACFDCGAK	AC(UniMod:4)FDC(UniMod:4)GAK	2	AC(UniMod:4)FDC(UniMod:4)GAK2	11958.9	13274.9	14538.3
D3ZU48	D3ZU48	D3ZU48_RAT	Klhdc4	Kelch domain containing 4	1	ACFDDAVPDIAQAK	AC(UniMod:4)FDDAVPDIAQAK	2	AC(UniMod:4)FDDAVPDIAQAK2	6719.98	5585.58	5481.73
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	ACFEYTAK	AC(UniMod:4)FEYTAK	2	AC(UniMod:4)FEYTAK2	214686	177469	204709
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	ACFEYTAKPSGYNPPISILGILEAEK	AC(UniMod:4)FEYTAKPSGYNPPISILGILEAEK	3	AC(UniMod:4)FEYTAKPSGYNPPISILGILEAEK3	12532.6	18310.4	14491.2
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	ACFEYTAKPSGYNPPISILGILEAEKER	AC(UniMod:4)FEYTAKPSGYNPPISILGILEAEKER	4	AC(UniMod:4)FEYTAKPSGYNPPISILGILEAEKER4	25413.3	34892.3	37951.1
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	ACFGGLFANLIRPGDAK	AC(UniMod:4)FGGLFANLIRPGDAK	3	AC(UniMod:4)FGGLFANLIRPGDAK3	14713.1	20422.9	24347.5
Q99MZ8	Q99MZ8	LASP1_RAT	Lasp1	LIM and SH3 domain protein 1	1	ACFHCETCK	AC(UniMod:4)FHC(UniMod:4)ETC(UniMod:4)K	2	AC(UniMod:4)FHC(UniMod:4)ETC(UniMod:4)K2	8663.28		38273.8
Q99MZ8	Q99MZ8	LASP1_RAT	Lasp1	LIM and SH3 domain protein 1	1	ACFHCETCK	AC(UniMod:4)FHC(UniMod:4)ETC(UniMod:4)K	3	AC(UniMod:4)FHC(UniMod:4)ETC(UniMod:4)K3	19919.9		84398.4
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	ACFLMAHNGWVMGDDPLR	AC(UniMod:4)FLMAHNGWVMGDDPLR	3	AC(UniMod:4)FLMAHNGWVMGDDPLR3	2413.79		6743.29
D4ACK1	D4ACK1	D4ACK1_RAT	Nup214	Nucleoporin 214	1	ACFQVGTPEEMK	AC(UniMod:4)FQVGTPEEMK	2	AC(UniMod:4)FQVGTPEEMK2	4270.73	1242.7	4101.09
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	ACFTMDPK	AC(UniMod:4)FTMDPK	1	AC(UniMod:4)FTMDPK1	4557.83	3277.23	1396.34
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	ACFTMDPK	AC(UniMod:4)FTMDPK	2	AC(UniMod:4)FTMDPK2	90891.4	97306	95310.9
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	ACFVHTGVYNLGTPR	AC(UniMod:4)FVHTGVYNLGTPR	2	AC(UniMod:4)FVHTGVYNLGTPR2	1120.98		1407.66
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	ACFVHTGVYNLGTPR	AC(UniMod:4)FVHTGVYNLGTPR	3	AC(UniMod:4)FVHTGVYNLGTPR3	19354.7	24146.4	21723.2
Q9QZR8	Q9QZR8	PDZD2_RAT	Pdzd2	PDZ domain-containing protein 2	1	ACFVPGASR	AC(UniMod:4)FVPGASR	2	AC(UniMod:4)FVPGASR2	7487.75	7932.22	5424.12
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	ACGCAAAPDVK	AC(UniMod:4)GC(UniMod:4)AAAPDVK	2	AC(UniMod:4)GC(UniMod:4)AAAPDVK2	195997	186778	202760
P54313	P54313	GBB2_RAT	Gnb2	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2	1	ACGDSTLTQITAGLDPVGR	AC(UniMod:4)GDSTLTQITAGLDPVGR	2	AC(UniMod:4)GDSTLTQITAGLDPVGR2	113086	103855	137332
P54313	P54313	GBB2_RAT	Gnb2	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2	1	ACGDSTLTQITAGLDPVGR	AC(UniMod:4)GDSTLTQITAGLDPVGR	3	AC(UniMod:4)GDSTLTQITAGLDPVGR3	189451	163431	208693
F1M1H0	F1M1H0	F1M1H0_RAT	Dera	deoxyribose-phosphate aldolase	1	ACGEAHLK	AC(UniMod:4)GEAHLK	2	AC(UniMod:4)GEAHLK2			6107.86
D4A3T4	D4A3T4	D4A3T4_RAT	Zfyve1	Zinc finger FYVE-type containing 1	1	ACGEGFCDSCSSK	AC(UniMod:4)GEGFC(UniMod:4)DSC(UniMod:4)SSK	2	AC(UniMod:4)GEGFC(UniMod:4)DSC(UniMod:4)SSK2	3737.94	2853.84	1711.47
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	ACGITPVYHNMFALMSETER	AC(UniMod:4)GITPVYHNMFALMSETER	3	AC(UniMod:4)GITPVYHNMFALMSETER3	58850.5	44146.2	43983.6
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	ACGLGEGDTEVFPTLHVVR	AC(UniMod:4)GLGEGDTEVFPTLHVVR	3	AC(UniMod:4)GLGEGDTEVFPTLHVVR3	27687.1	22245.1	29900.7
Q3MIE4	Q3MIE4	VAT1_RAT	Vat1	Synaptic vesicle membrane protein VAT-1 homolog	1	ACGLNFADLMGR	AC(UniMod:4)GLNFADLMGR	2	AC(UniMod:4)GLNFADLMGR2	81546.3	83635.6	30748.5
P51583	P51583;A0A0G2K5S4	PUR6_RAT	Paics	Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase	0	ACGNFGIPCELR	AC(UniMod:4)GNFGIPC(UniMod:4)ELR	2	AC(UniMod:4)GNFGIPC(UniMod:4)ELR2	74556.4	68220.8	87773.8
G3V6K6	G3V6K6	G3V6K6_RAT	Egfr	Receptor protein-tyrosine kinase	1	ACGPDYYEVEEDGVSK	AC(UniMod:4)GPDYYEVEEDGVSK	2	AC(UniMod:4)GPDYYEVEEDGVSK2	4472.59	2037.93	5470.63
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	ACGQICSEGPGEQDSR	AC(UniMod:4)GQIC(UniMod:4)SEGPGEQDSR	2	AC(UniMod:4)GQIC(UniMod:4)SEGPGEQDSR2	174194	152576	189700
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	ACGQICSEGPGEQDSR	AC(UniMod:4)GQIC(UniMod:4)SEGPGEQDSR	3	AC(UniMod:4)GQIC(UniMod:4)SEGPGEQDSR3	29980.2	19261.7	29925.3
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	ACGQIFCGK	AC(UniMod:4)GQIFC(UniMod:4)GK	2	AC(UniMod:4)GQIFC(UniMod:4)GK2	26183	37367.2	28225
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	ACGVDFEIR	AC(UniMod:4)GVDFEIR	2	AC(UniMod:4)GVDFEIR2	142069	111212	129410
P29066	P29066	ARRB1_RAT	Arrb1	Beta-arrestin-1	1	ACGVDYEVK	AC(UniMod:4)GVDYEVK	2	AC(UniMod:4)GVDYEVK2	81186.3	73697.9	60670.9
Q8CIN9	Q8CIN9	RFFL_RAT	Rffl	E3 ubiquitin-protein ligase rififylin	1	ACGVHFASTTR	AC(UniMod:4)GVHFASTTR	3	AC(UniMod:4)GVHFASTTR3	25383.3	23276.1	26835.9
P70569	P70569;Q9QYF3;F1M111	MYO5B_RAT	Myo5b	Unconventional myosin-Vb	0	ACGVLETIR	AC(UniMod:4)GVLETIR	2	AC(UniMod:4)GVLETIR2	18896.7	14041.3	17569.2
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	ACHAGEGQMSFK	AC(UniMod:4)HAGEGQMSFK	2	AC(UniMod:4)HAGEGQMSFK2	14582.9	22001.3	17876.7
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	ACHAGEGQMSFK	AC(UniMod:4)HAGEGQMSFK	3	AC(UniMod:4)HAGEGQMSFK3	81309.9	102127	104972
D3ZZJ7	D3ZZJ7	D3ZZJ7_RAT	Dcp1b	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	ACHGAGAGSSPVTLSSGEGR	AC(UniMod:4)HGAGAGSSPVTLSSGEGR	3	AC(UniMod:4)HGAGAGSSPVTLSSGEGR3	5297.86		2925.13
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ACHGTLIK	AC(UniMod:4)HGTLIK	2	AC(UniMod:4)HGTLIK2	4511.25	7877.96	13274.4
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	ACIDTALENLSTLK	AC(UniMod:4)IDTALENLSTLK	2	AC(UniMod:4)IDTALENLSTLK2	5756.78	5297.71	3246.75
Q6AY30	Q6AY30	SCPDL_RAT	Sccpdh	Saccharopine dehydrogenase-like oxidoreductase	1	ACIENGTSCIDICGEPQFLELMHVK	AC(UniMod:4)IENGTSC(UniMod:4)IDIC(UniMod:4)GEPQFLELMHVK	3	AC(UniMod:4)IENGTSC(UniMod:4)IDIC(UniMod:4)GEPQFLELMHVK3	8429.25	8144.64	7182.24
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	ACIGNTLCQK	AC(UniMod:4)IGNTLC(UniMod:4)QK	2	AC(UniMod:4)IGNTLC(UniMod:4)QK2	52511.3	49124.6	50399.2
D3ZXK7	D3ZXK7	RN123_RAT	Rnf123	E3 ubiquitin-protein ligase RNF123	1	ACINQHLMNNK	AC(UniMod:4)INQHLMNNK	3	AC(UniMod:4)INQHLMNNK3	16485	21919.3	23767.8
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	ACISAPINGLLQLAK	AC(UniMod:4)ISAPINGLLQLAK	2	AC(UniMod:4)ISAPINGLLQLAK2	80019.7	96393.4	93421.8
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	ACISAPINGLLQLAK	AC(UniMod:4)ISAPINGLLQLAK	3	AC(UniMod:4)ISAPINGLLQLAK3	30549.8	39030.3	46194.3
A0A0G2K6C7	A0A0G2K6C7	A0A0G2K6C7_RAT	Trim5	Tripartite motif-containing 5	1	ACITINYESNR	AC(UniMod:4)ITINYESNR	2	AC(UniMod:4)ITINYESNR2	15609.3	22314.8	21262.7
D3ZGE9	M0R7T6;D3ZGE9	D3ZGE9_RAT	Rbm38	RNA binding motif protein 38	0	ACKDPNPIIDGR	AC(UniMod:4)KDPNPIIDGR	3	AC(UniMod:4)KDPNPIIDGR3	38535.2	37740.3	29234.6
Q6P767	Q6P767	PTTG_RAT	Pttg1ip	Pituitary tumor-transforming gene 1 protein-interacting protein	1	ACLDYPVR	AC(UniMod:4)LDYPVR	2	AC(UniMod:4)LDYPVR2	162048	132649	135733
Q4V7F2	Q4V7F2	CREL1_RAT	Creld1	Protein disulfide isomerase Creld1	1	ACLGCMGAGPGR	AC(UniMod:4)LGC(UniMod:4)MGAGPGR	2	AC(UniMod:4)LGC(UniMod:4)MGAGPGR2	49508.6	43729.3	45585.4
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	ACLIFFDEIDAIGGAR	AC(UniMod:4)LIFFDEIDAIGGAR	3	AC(UniMod:4)LIFFDEIDAIGGAR3	8268.36	7607.34	10893.3
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	ACLISLGYDIGNDPQGEAEFAR	AC(UniMod:4)LISLGYDIGNDPQGEAEFAR	3	AC(UniMod:4)LISLGYDIGNDPQGEAEFAR3	287469	302336	291949
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	ACLISLGYDVENDR	AC(UniMod:4)LISLGYDVENDR	2	AC(UniMod:4)LISLGYDVENDR2	204499	186895	175494
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	ACLISLGYDVENDR	AC(UniMod:4)LISLGYDVENDR	3	AC(UniMod:4)LISLGYDVENDR3	13550.5	12332.5	14173
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	ACLISLGYDVENDRQGDAEFNR	AC(UniMod:4)LISLGYDVENDRQGDAEFNR	3	AC(UniMod:4)LISLGYDVENDRQGDAEFNR3	305566	334508	282179
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	ACLISLGYDVENDRQGDAEFNR	AC(UniMod:4)LISLGYDVENDRQGDAEFNR	4	AC(UniMod:4)LISLGYDVENDRQGDAEFNR4	17358.7	17519.1	15795
A0A8I6GH96;B5DEM7	B5DEM7;A0A8I6GH96	A0A8I6GH96_RAT;B5DEM7_RAT	ENSRNOG00000068353;Supt4h1	Transcription elongation factor SPT4	0	ACLLCSLVK	AC(UniMod:4)LLC(UniMod:4)SLVK	2	AC(UniMod:4)LLC(UniMod:4)SLVK2	3302.05	12015.1	3135.58
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	ACLSALSEVK	AC(UniMod:4)LSALSEVK	2	AC(UniMod:4)LSALSEVK2	30519.3	25495.8	19836.3
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	ACLVTTVTSSGPSQSTIK	AC(UniMod:4)LVTTVTSSGPSQSTIK	2	AC(UniMod:4)LVTTVTSSGPSQSTIK2	4351.33	5387.95	7367.66
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	ACLVTTVTSSGPSQSTIK	AC(UniMod:4)LVTTVTSSGPSQSTIK	3	AC(UniMod:4)LVTTVTSSGPSQSTIK3	5216.85	6621.79	8627.71
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	ACMAGPSDTEAVK	AC(UniMod:4)MAGPSDTEAVK	2	AC(UniMod:4)MAGPSDTEAVK2	21286	26486.2	21213.8
A0A8I6B124	A0A8I6B124	A0A8I6B124_RAT	Zswim8	Zinc finger, SWIM-type containing 8	1	ACMAVEEAAK	AC(UniMod:4)MAVEEAAK	2	AC(UniMod:4)MAVEEAAK2		4494.75	
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	ACMEETLWLQENIR	AC(UniMod:4)MEETLWLQENIR	2	AC(UniMod:4)MEETLWLQENIR2	25850.3	39312.9	39460.4
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	ACMEETLWLQENIR	AC(UniMod:4)MEETLWLQENIR	3	AC(UniMod:4)MEETLWLQENIR3	12347.3	11393.1	12766.8
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	ACMEETLWLQENIRDK	AC(UniMod:4)MEETLWLQENIRDK	3	AC(UniMod:4)MEETLWLQENIRDK3	46622.1	64732.1	74019.8
Q499S6	Q499S6	Q499S6_RAT	Ctsf	Cathepsin F	1	ACMGGLPSNAYTAIK	AC(UniMod:4)MGGLPSNAYTAIK	2	AC(UniMod:4)MGGLPSNAYTAIK2	7917.77	11023.5	5055.31
P30349	P30349	LKHA4_RAT	Lta4h	Leukotriene A-4 hydrolase	1	ACMHPVTAMLVGK	AC(UniMod:4)MHPVTAMLVGK	3	AC(UniMod:4)MHPVTAMLVGK3	5624.46	4723.77	9054.26
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	ACMVGHVDFK	AC(UniMod:4)MVGHVDFK	3	AC(UniMod:4)MVGHVDFK3	4900.49	8559.84	6324.35
O35353	O35353	GBB4_RAT	Gnb4	Guanine nucleotide-binding protein subunit beta-4	1	ACNDATLVQITSNMDSVGR	AC(UniMod:4)NDATLVQITSNMDSVGR	3	AC(UniMod:4)NDATLVQITSNMDSVGR3	34043.9	33726.3	43388.8
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	ACNPQYAGAIVVHCSAGVGR	AC(UniMod:4)NPQYAGAIVVHC(UniMod:4)SAGVGR	3	AC(UniMod:4)NPQYAGAIVVHC(UniMod:4)SAGVGR3	20001.1	6542.13	18317.8
P18484	P18484;A0A8I6A4J2	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	0	ACNQLGQFLQHR	AC(UniMod:4)NQLGQFLQHR	2	AC(UniMod:4)NQLGQFLQHR2	1852.36	1607.53	
P18484	P18484;A0A8I6A4J2	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	0	ACNQLGQFLQHR	AC(UniMod:4)NQLGQFLQHR	3	AC(UniMod:4)NQLGQFLQHR3	50827	49896.1	52777.9
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	ACPEDCNDQGR	AC(UniMod:4)PEDC(UniMod:4)NDQGR	2	AC(UniMod:4)PEDC(UniMod:4)NDQGR2			8972.57
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	ACPFLPVK	AC(UniMod:4)PFLPVK	2	AC(UniMod:4)PFLPVK2	68626.7	67396.5	66079.8
Q6V0K7	Q6V0K7	OIT3_RAT	Oit3	Oncoprotein-induced transcript 3 protein	1	ACPGGYYVYR	AC(UniMod:4)PGGYYVYR	2	AC(UniMod:4)PGGYYVYR2	124266	133032	165295
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	ACPVGYHLHR	AC(UniMod:4)PVGYHLHR	2	AC(UniMod:4)PVGYHLHR2	28023.1	34597.5	23523.7
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	ACPVGYHLHR	AC(UniMod:4)PVGYHLHR	3	AC(UniMod:4)PVGYHLHR3	255228	261138	258400
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	ACQDVSTPQDVHTTQGVPAAR	AC(UniMod:4)QDVSTPQDVHTTQGVPAAR	3	AC(UniMod:4)QDVSTPQDVHTTQGVPAAR3	44310	45156.5	60139.2
A0A8I6AIH6	A0A8I6AIH6	A0A8I6AIH6_RAT	Suclg2	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial	1	ACQELELK	AC(UniMod:4)QELELK	2	AC(UniMod:4)QELELK2	77566.3	84507.3	80821.9
A0A8I6AIH6	A0A8I6AIH6	A0A8I6AIH6_RAT	Suclg2	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial	1	ACQELELKVPLVVR	AC(UniMod:4)QELELKVPLVVR	3	AC(UniMod:4)QELELKVPLVVR3	5352.22	5286.61	8088.23
O08561	O08561	PI4KB_RAT	Pi4kb	Phosphatidylinositol 4-kinase beta	1	ACQEVLEK	AC(UniMod:4)QEVLEK	2	AC(UniMod:4)QEVLEK2	3409.93	3393.19	
Q99MB4	Q99MB4	ZNG1_RAT	Zng1	Zinc-regulated GTPase metalloprotein activator 1	1	ACQLVFIGK	AC(UniMod:4)QLVFIGK	2	AC(UniMod:4)QLVFIGK2	5081.9	1783	4047.97
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	ACQMLLR	AC(UniMod:4)QMLLR	2	AC(UniMod:4)QMLLR2	28147.7	35891.7	32675.9
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	ACQPPFAFR	AC(UniMod:4)QPPFAFR	2	AC(UniMod:4)QPPFAFR2	370185	372564	410591
P49242	P49242;M0R6L4	RS3A_RAT	Rps3a	Small ribosomal subunit protein eS1	0	ACQSIYPLHDVFVR	AC(UniMod:4)QSIYPLHDVFVR	2	AC(UniMod:4)QSIYPLHDVFVR2	4302.74	4679.48	
P49242	P49242;M0R6L4	RS3A_RAT	Rps3a	Small ribosomal subunit protein eS1	0	ACQSIYPLHDVFVR	AC(UniMod:4)QSIYPLHDVFVR	3	AC(UniMod:4)QSIYPLHDVFVR3	34191.7	30757.8	25321.8
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	ACQVALDEIK	AC(UniMod:4)QVALDEIK	2	AC(UniMod:4)QVALDEIK2	22425.5	21434.7	22595.1
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	ACQVCSAWIASGVVSDLGDLRR	AC(UniMod:4)QVC(UniMod:4)SAWIASGVVSDLGDLRR	3	AC(UniMod:4)QVC(UniMod:4)SAWIASGVVSDLGDLRR3	2479.03	11882.7	
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	ACQVYIQHTR	AC(UniMod:4)QVYIQHTR	2	AC(UniMod:4)QVYIQHTR2	9051.08	21745.1	17447.3
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	ACQVYIQHTR	AC(UniMod:4)QVYIQHTR	3	AC(UniMod:4)QVYIQHTR3	83166.1	35870.3	41920
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	ACSAIHAVNLR	AC(UniMod:4)SAIHAVNLR	2	AC(UniMod:4)SAIHAVNLR2	17068	19727.8	15233
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	ACSAIHAVNLR	AC(UniMod:4)SAIHAVNLR	3	AC(UniMod:4)SAIHAVNLR3	476707	569756	511938
P35000	P35000	VIPR2_RAT	Vipr2	Vasoactive intestinal polypeptide receptor 2	1	ACSGVWDNITCWR	AC(UniMod:4)SGVWDNITC(UniMod:4)WR	2	AC(UniMod:4)SGVWDNITC(UniMod:4)WR2	4132.46		
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	ACSLLPAPASTK	AC(UniMod:4)SLLPAPASTK	2	AC(UniMod:4)SLLPAPASTK2	13417.8	12965.5	
Q5GH61	Q5GH61	XK_RAT	Xk	Endoplasmic reticulum membrane adapter protein XK	1	ACTDQGAQPSTSK	AC(UniMod:4)TDQGAQPSTSK	2	AC(UniMod:4)TDQGAQPSTSK2			2632.52
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	ACTGSLNMTLQR	AC(UniMod:4)TGSLNMTLQR	2	AC(UniMod:4)TGSLNMTLQR2	23091.3	12421.4	23222.4
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	ACTILLR	AC(UniMod:4)TILLR	2	AC(UniMod:4)TILLR2	481165	518187	477660
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	ACTLDCPFGFLTDVHNCELCQCR	AC(UniMod:4)TLDC(UniMod:4)PFGFLTDVHNC(UniMod:4)ELC(UniMod:4)QC(UniMod:4)R	3	AC(UniMod:4)TLDC(UniMod:4)PFGFLTDVHNC(UniMod:4)ELC(UniMod:4)QC(UniMod:4)R3	17745.2	13642.1	17058.9
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	ACTLDCPFGFLTDVHNCELCQCRPR	AC(UniMod:4)TLDC(UniMod:4)PFGFLTDVHNC(UniMod:4)ELC(UniMod:4)QC(UniMod:4)RPR	4	AC(UniMod:4)TLDC(UniMod:4)PFGFLTDVHNC(UniMod:4)ELC(UniMod:4)QC(UniMod:4)RPR4	33969.8	30623.8	28410.2
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	ACVDSNENGDLGK	AC(UniMod:4)VDSNENGDLGK	2	AC(UniMod:4)VDSNENGDLGK2	48736	52958.2	58216.1
D4A0T9	D4A0T9	D4A0T9_RAT	Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	1	ACVGEDLQAK	AC(UniMod:4)VGEDLQAK	2	AC(UniMod:4)VGEDLQAK2	37805.5	30451.1	16921.2
A0A8I6AFT7	A0A8I6AFT7	A0A8I6AFT7_RAT	Nadk	NAD(+) kinase	1	ACVLQNPQTIMHIQDPASQR	AC(UniMod:4)VLQNPQTIMHIQDPASQR	3	AC(UniMod:4)VLQNPQTIMHIQDPASQR3	23010.5	17341.8	15142.6
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	ACVPGCPATEPSPASFLR	AC(UniMod:4)VPGC(UniMod:4)PATEPSPASFLR	2	AC(UniMod:4)VPGC(UniMod:4)PATEPSPASFLR2	10384.2	17723.7	
Q5PQS0	Q5PQS0	PKHM1_RAT	Plekhm1	Pleckstrin homology domain-containing family M member 1	1	ACVSSLDYR	AC(UniMod:4)VSSLDYR	2	AC(UniMod:4)VSSLDYR2	5156.62	7819.14	
A0A8I6G5Q1	A0A8I6G5Q1	A0A8I6G5Q1_RAT	Sema4d	Semaphorin 4D	1	ACVTLHQAEGSSR	AC(UniMod:4)VTLHQAEGSSR	3	AC(UniMod:4)VTLHQAEGSSR3	28119.5	20635.2	17587
P06685	P06685;P06686	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	0	ACVVHGSDLK	AC(UniMod:4)VVHGSDLK	2	AC(UniMod:4)VVHGSDLK2	24912.7	20137.1	25984.1
D3Z9G1	D3Z9G1	D3Z9G1_RAT	Fbxw17	F-box and WD-40 domain protein 17	1	ACWAPDEAAR	AC(UniMod:4)WAPDEAAR	2	AC(UniMod:4)WAPDEAAR2	4838.96	6355.13	3523.55
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	ACWVLHYFCEVK	AC(UniMod:4)WVLHYFC(UniMod:4)EVK	3	AC(UniMod:4)WVLHYFC(UniMod:4)EVK3	18785.9	24304.7	15327.6
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	ACYALENFVENLGPK	AC(UniMod:4)YALENFVENLGPK	3	AC(UniMod:4)YALENFVENLGPK3		3632.93	5810.41
P62909	D3ZVH2;P62909	RS3_RAT	Rps3	Small ribosomal subunit protein uS3	0	ACYGVLR	AC(UniMod:4)YGVLR	2	AC(UniMod:4)YGVLR2	29475.1	21821.5	26444.2
P85515	F7F067;P85515	ACTZ_RAT	Actr1a	Alpha-centractin	0	ACYLSINPQK	AC(UniMod:4)YLSINPQK	2	AC(UniMod:4)YLSINPQK2	780164	705688	868903
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	ADAACAPDTESKPIK	ADAAC(UniMod:4)APDTESKPIK	2	ADAAC(UniMod:4)APDTESKPIK2	10881.4	4321.06	6504.73
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	ADAACAPDTESKPIK	ADAAC(UniMod:4)APDTESKPIK	3	ADAAC(UniMod:4)APDTESKPIK3	69833.2	81865	61487.8
Q8K4S7	A0A8I6G3R2;Q8K4S7	CBLB_RAT	Cblb	E3 ubiquitin-protein ligase CBL-B	0	ADAAEFWR	ADAAEFWR	2	ADAAEFWR2	42643.6	42408	40562.5
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	ADAATSFLR	ADAATSFLR	2	ADAATSFLR2	8051.72	2599.35	11378.4
F7EXP7	F7EXP7	F7EXP7_RAT	Snx7	Sorting nexin 7	1	ADADLLTEEIGK	ADADLLTEEIGK	2	ADADLLTEEIGK2	1958.21	5928.78	4385.95
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	ADADTVLLFLK	ADADTVLLFLK	2	ADADTVLLFLK2		2683.27	1716.28
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	ADAEAPPEK	ADAEAPPEK	2	ADAEAPPEK2			6797.51
M0R8P6	M0R8P6	M0R8P6_RAT	Wwc3	Uncharacterized protein	1	ADAECGQLLR	ADAEC(UniMod:4)GQLLR	2	ADAEC(UniMod:4)GQLLR2	10866.6	8081.87	5671.04
B5DEH2	B5DEH2	ERLN2_RAT	Erlin2	Erlin-2	1	ADAECYTALK	ADAEC(UniMod:4)YTALK	2	ADAEC(UniMod:4)YTALK2	79162.4	68668.3	84356.4
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	ADAEDLLHPFLSSILQDCR	ADAEDLLHPFLSSILQDC(UniMod:4)R	3	ADAEDLLHPFLSSILQDC(UniMod:4)R3	7586.62	1181.09	5322.3
Q62871	Q62871	DC1I2_RAT	Dync1i2	Cytoplasmic dynein 1 intermediate chain 2	1	ADAEEEAATR	ADAEEEAATR	2	ADAEEEAATR2	88647.9	103792	97365.5
D3ZUP8	D3ZUP8	D3ZUP8_RAT	Lmbrd2	LMBR1 domain containing 2	1	ADAEENLEDVMEEVRK	ADAEENLEDVMEEVRK	3	ADAEENLEDVMEEVRK3	5513.36	4837.58	2748.84
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ADAEGESDLENSR	ADAEGESDLENSR	2	ADAEGESDLENSR2	656045	498105	553887
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ADAEGESDLENSR	ADAEGESDLENSR	3	ADAEGESDLENSR3	8608.6	8667.39	8262.19
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ADAEGESDLENSRK	ADAEGESDLENSRK	2	ADAEGESDLENSRK2	149992	129114	134874
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ADAEGESDLENSRK	ADAEGESDLENSRK	3	ADAEGESDLENSRK3	3.08313e+06	3.46114e+06	3.16124e+06
B1WBY7	B1WBY7	B1WBY7_RAT	Erlin1	Erlin	1	ADAEYYAAHK	ADAEYYAAHK	2	ADAEYYAAHK2	4876.05	5667.53	6647.31
Q6AZ50	Q6AZ50	ATG3_RAT	Atg3	Ubiquitin-like-conjugating enzyme ATG3	1	ADAGGEDAILQTR	ADAGGEDAILQTR	2	ADAGGEDAILQTR2	199888	220961	197943
Q6AZ50	Q6AZ50	ATG3_RAT	Atg3	Ubiquitin-like-conjugating enzyme ATG3	1	ADAGGEDAILQTR	ADAGGEDAILQTR	3	ADAGGEDAILQTR3	6934.58	9406.26	8730.92
O55171	O55171	ACOT2_RAT	Acot2	Acyl-coenzyme A thioesterase 2, mitochondrial	1	ADAGGELDLAR	ADAGGELDLAR	2	ADAGGELDLAR2	7240.71	11573.6	7079.87
D3ZE05	D3ZE05	D3ZE05_RAT	Cilp2	Cartilage intermediate layer protein 2	1	ADAGTAVTFQCR	ADAGTAVTFQC(UniMod:4)R	2	ADAGTAVTFQC(UniMod:4)R2	24384.6	27485.6	29614.4
P63025	P63045;P63025	VAMP3_RAT	Vamp3	Vesicle-associated membrane protein 3	0	ADALQAGASQFETSAAK	ADALQAGASQFETSAAK	2	ADALQAGASQFETSAAK2	173021	170217	168692
P63025	P63045;P63025	VAMP3_RAT	Vamp3	Vesicle-associated membrane protein 3	0	ADALQAGASQFETSAAK	ADALQAGASQFETSAAK	3	ADALQAGASQFETSAAK3	72338	68774.8	94278.9
A0A0G2JTM9	A0A0G2JTM9	A0A0G2JTM9_RAT	Dnajb14	DnaJ heat shock protein family (Hsp40) member B14	1	ADALSMDNCK	ADALSMDNC(UniMod:4)K	2	ADALSMDNC(UniMod:4)K2	15050	14000	13059.8
E9PTA5	E9PTA5	E9PTA5_RAT	Pign	GPI ethanolamine phosphate transferase 1	1	ADALYELDEDGNSR	ADALYELDEDGNSR	2	ADALYELDEDGNSR2	6383.42	4217.8	5899.83
B0BN63	B0BN63	B0BN63_RAT	Ahsa1	Activator of Hsp90 ATPase activity 1	1	ADATNVNNWHWTER	ADATNVNNWHWTER	3	ADATNVNNWHWTER3	3117.62	2778.72	6129.37
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	ADAVQDSEMVELVELEIR	ADAVQDSEMVELVELEIR	3	ADAVQDSEMVELVELEIR3	11950.2	8215.72	13371.6
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	ADAVWNK	ADAVWNK	2	ADAVWNK2		8913.67	9905.87
D3ZZU4	D3ZZU4	D3ZZU4_RAT	Tmem160	Transmembrane protein 160	1	ADAWLLR	ADAWLLR	2	ADAWLLR2	26916.9	38172.3	33715.5
D3ZGW2	D3ZGW2	D3ZGW2_RAT	Ap1g2	AP-1 complex subunit gamma	1	ADCASGILLAAER	ADC(UniMod:4)ASGILLAAER	2	ADC(UniMod:4)ASGILLAAER2	6037.34	3457.76	
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	ADCASGVFLAAEK	ADC(UniMod:4)ASGVFLAAEK	2	ADC(UniMod:4)ASGVFLAAEK2	110388	98918.5	106006
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	ADCASGVFLAAEK	ADC(UniMod:4)ASGVFLAAEK	3	ADC(UniMod:4)ASGVFLAAEK3	3430.54	4337.82	3706.66
D4A830	D4A830	D4A830_RAT	Ppa2	inorganic diphosphatase	1	ADCEEEHGIPR	ADC(UniMod:4)EEEHGIPR	3	ADC(UniMod:4)EEEHGIPR3	43573.2	32457.8	43424.2
Q923V4	Q923V4	FBX6_RAT	Fbxo6	F-box only protein 6	1	ADCGCTYHLR	ADC(UniMod:4)GC(UniMod:4)TYHLR	2	ADC(UniMod:4)GC(UniMod:4)TYHLR2	6306.42	4764.57	2584.84
Q923V4	Q923V4	FBX6_RAT	Fbxo6	F-box only protein 6	1	ADCGCTYHLR	ADC(UniMod:4)GC(UniMod:4)TYHLR	3	ADC(UniMod:4)GC(UniMod:4)TYHLR3	33836.3	29977.2	39389.7
P36953	P36953	AFAM_RAT	Afm	Afamin	1	ADCIINANK	ADC(UniMod:4)IINANK	2	ADC(UniMod:4)IINANK2	188422	171828	164637
P36953	P36953	AFAM_RAT	Afm	Afamin	1	ADCIINANKDDRPEDLSLR	ADC(UniMod:4)IINANKDDRPEDLSLR	4	ADC(UniMod:4)IINANKDDRPEDLSLR4	14203.7	10551.8	8687.95
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	ADCILER	ADC(UniMod:4)ILER	2	ADC(UniMod:4)ILER2	2.48852e+06	2.62292e+06	2.67134e+06
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	ADCLVPR	ADC(UniMod:4)LVPR	2	ADC(UniMod:4)LVPR2	26210.3	20706.2	27371.4
Q9JJM9	Q9JJM9	SEPT5_RAT	Septin5	Septin-5	1	ADCLVPSEIR	ADC(UniMod:4)LVPSEIR	2	ADC(UniMod:4)LVPSEIR2	43333.8	45064.4	38441
Q9JJM9	Q9JJM9	SEPT5_RAT	Septin5	Septin-5	1	ADCLVPSEIRK	ADC(UniMod:4)LVPSEIRK	2	ADC(UniMod:4)LVPSEIRK2	4438.62	3617.62	8319.74
Q9JJM9	Q9JJM9	SEPT5_RAT	Septin5	Septin-5	1	ADCLVPSEIRK	ADC(UniMod:4)LVPSEIRK	3	ADC(UniMod:4)LVPSEIRK3	57283.3	48278.1	68439.4
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	ADCPHPIR	ADC(UniMod:4)PHPIR	2	ADC(UniMod:4)PHPIR2	19049.8	21939	28105.4
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	ADCSFWSK	ADC(UniMod:4)SFWSK	2	ADC(UniMod:4)SFWSK2	4365.35	4832.54	7047.99
Q9QYW3	Q9QYW3	PHOCN_RAT	Mob4	MOB-like protein phocein	1	ADCSNIDK	ADC(UniMod:4)SNIDK	1	ADC(UniMod:4)SNIDK1			4606.78
Q9QYW3	Q9QYW3	PHOCN_RAT	Mob4	MOB-like protein phocein	1	ADCSNIDK	ADC(UniMod:4)SNIDK	2	ADC(UniMod:4)SNIDK2			222231
P11915	P11915	SCP2_RAT	Scp2	Sterol carrier protein 2	1	ADCTITMADSDLLALMTGK	ADC(UniMod:4)TITMADSDLLALMTGK	3	ADC(UniMod:4)TITMADSDLLALMTGK3	6865.79	8808.85	8247.07
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	ADDADEFGYSR	ADDADEFGYSR	2	ADDADEFGYSR2	41238.9	42676.8	44859.8
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	ADDDQQIR	ADDDQQIR	1	ADDDQQIR1	158241		140587
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	ADDDQQIR	ADDDQQIR	2	ADDDQQIR2	7.08453e+06	7.16181e+06	6.46284e+06
D3ZQC1	D3ZQC1	D3ZQC1_RAT	B3galt6	Hexosyltransferase	1	ADDDSFAR	ADDDSFAR	2	ADDDSFAR2	6182.93	3954.28	9725.1
Q9JJ05	Q9JJ05	C1GLT_RAT	C1galt1	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1	1	ADDDTYVILDNLR	ADDDTYVILDNLR	2	ADDDTYVILDNLR2		7773.64	6566.09
M0R6S5	M0R6S5;D3ZRM3	M0R6S5_RAT	Chsy3	Hexosyltransferase	0	ADDDVYIK	ADDDVYIK	2	ADDDVYIK2	4868.63	4649.99	3874.89
Q66HF2	Q66HF2	TM9S1_RAT	Tm9sf1	Transmembrane 9 superfamily member 1	1	ADDGGFFPR	ADDGGFFPR	2	ADDGGFFPR2	2880.04		8859.62
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	ADDGLQSSDMR	ADDGLQSSDMR	2	ADDGLQSSDMR2	20048.3	27899.8	27275.5
P05065	P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	1	ADDGRPFPQVIK	ADDGRPFPQVIK	2	ADDGRPFPQVIK2	55567.7	63570.2	59809.6
P05065	P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	1	ADDGRPFPQVIK	ADDGRPFPQVIK	3	ADDGRPFPQVIK3	721679	680422	676069
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	ADDIEQMR	ADDIEQMR	2	ADDIEQMR2	101609	113438	125941
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	ADDILANPPR	ADDILANPPR	2	ADDILANPPR2	9593.89	8466.4	
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	ADDILDLK	ADDILDLK	2	ADDILDLK2	21363.5	19821.2	28288.8
Q5RK09	Q5RK09	EIF3G_RAT	Eif3g	Eukaryotic translation initiation factor 3 subunit G	1	ADDNATIR	ADDNATIR	2	ADDNATIR2	61529.1	75737.4	92821.9
D3ZU48	D3ZU48	D3ZU48_RAT	Klhdc4	Kelch domain containing 4	1	ADDPEGATEEETGGTSAPEPLEVIK	ADDPEGATEEETGGTSAPEPLEVIK	3	ADDPEGATEEETGGTSAPEPLEVIK3	7826.18	2489.29	8117.28
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	ADDPNSIFLIDHAWTCR	ADDPNSIFLIDHAWTC(UniMod:4)R	3	ADDPNSIFLIDHAWTC(UniMod:4)R3	13237.5	9828.61	9874.38
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	ADDPSSYMEVVQAANTSGNWEELVK	ADDPSSYMEVVQAANTSGNWEELVK	3	ADDPSSYMEVVQAANTSGNWEELVK3	46482.8	55473.8	75374
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	ADDPTMGEGPDK	ADDPTMGEGPDK	2	ADDPTMGEGPDK2	74628	53372.2	48511.4
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	ADDQTKVPEIISSIR	ADDQTKVPEIISSIR	3	ADDQTKVPEIISSIR3	17880.7	23149.1	20551.5
D3ZU48	D3ZU48	D3ZU48_RAT	Klhdc4	Kelch domain containing 4	1	ADDSASEASSTGQEPCPR	ADDSASEASSTGQEPC(UniMod:4)PR	2	ADDSASEASSTGQEPC(UniMod:4)PR2	13313.6	11455.5	9222.58
D3ZU48	D3ZU48	D3ZU48_RAT	Klhdc4	Kelch domain containing 4	1	ADDSASEASSTGQEPCPR	ADDSASEASSTGQEPC(UniMod:4)PR	3	ADDSASEASSTGQEPC(UniMod:4)PR3	3826.48	10594.5	4853.87
P62870	P62870;F1LZ51	ELOB_RAT	Elob	Elongin-B	0	ADDTFEALR	ADDTFEALR	2	ADDTFEALR2	187325	158610	178183
F7FFW7	F7FFW7	F7FFW7_RAT	Atp6v0d1	ATPase H+ transporting V0 subunit D1	1	ADDYEQVK	ADDYEQVK	2	ADDYEQVK2	52769.1	54941.4	69077.3
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	ADEARPNTIDFGK	ADEARPNTIDFGK	3	ADEARPNTIDFGK3	14304.6	14958.8	11549.5
P52873	P52873	PYC_RAT	Pc	Pyruvate carboxylase, mitochondrial	1	ADEAYLIGR	ADEAYLIGR	2	ADEAYLIGR2	5585.95	8309.46	8010.69
A0A140UHX9	A0A140UHX9	A0A140UHX9_RAT	Ccz1	CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated	1	ADEDEEIIVK	ADEDEEIIVK	2	ADEDEEIIVK2	2981.07	4057.87	5790.19
P53812	P53812	PIPNB_RAT	Pitpnb	Phosphatidylinositol transfer protein beta isoform	1	ADEDPALFQSVK	ADEDPALFQSVK	2	ADEDPALFQSVK2	8628.76	7551.87	7809.26
P61972	P61972;A0A8I6ABF4	NTF2_RAT	Nutf2	Nuclear transport factor 2	0	ADEDPIMGFHQMFLLK	ADEDPIMGFHQMFLLK	3	ADEDPIMGFHQMFLLK3	9554.49	10156.9	3402.13
Q63716	Q63716;A0A0G2K3Z9	PRDX1_RAT	Prdx1	Peroxiredoxin-1	0	ADEGISFR	ADEGISFR	2	ADEGISFR2	232223	214653	226942
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	ADEHILELEAEAPAEAEAGAGR	ADEHILELEAEAPAEAEAGAGR	3	ADEHILELEAEAPAEAEAGAGR3			4300.62
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	ADEHILELEAEAPAEAEAGAGRR	ADEHILELEAEAPAEAEAGAGRR	4	ADEHILELEAEAPAEAEAGAGRR4	6104.36	19628.3	8871.56
P53565	P53565;A0A8I5ZR58	CUX1_RAT	Cux1	Homeobox protein cut-like 1	0	ADEIEMIMTDLER	ADEIEMIMTDLER	2	ADEIEMIMTDLER2	12078.6	4976.85	9335.43
Q5FVM3	Q5FVM3	RETR1_RAT	Retreg1	Reticulophagy regulator 1	1	ADELLSWK	ADELLSWK	2	ADELLSWK2	5124.31	3041.66	3912
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	ADELPPK	ADELPPK	2	ADELPPK2	43694.6	31658.8	
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	ADELQLQLFQTESR	ADELQLQLFQTESR	2	ADELQLQLFQTESR2	14086.2	13693.9	15529.8
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	ADEMYDK	ADEMYDK	1	ADEMYDK1	1961.57	1079.52	2389.35
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	ADEMYDK	ADEMYDK	2	ADEMYDK2	80596.6	60586.9	96137
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	ADENDEVK	ADENDEVK	2	ADENDEVK2			8872.44
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	ADEPMEH	ADEPMEH	1	ADEPMEH1	47553.8	32123.6	
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	ADEPMEH	ADEPMEH	2	ADEPMEH2	1.36724e+06	1.35435e+06	1.68665e+06
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	ADERPSFK	ADERPSFK	2	ADERPSFK2	34403.5	14811.6	23917.5
Q8R553	Q8R553	CSTN3_RAT	Clstn3	Calsyntenin-3	1	ADESWQGTVTDTR	ADESWQGTVTDTR	2	ADESWQGTVTDTR2	6640.24	6398.62	8656.65
A0A8I6GIL4	A0A8I6GIL4	A0A8I6GIL4_RAT	Tmem87a	Transmembrane protein 87A	1	ADEVETYLENLK	ADEVETYLENLK	2	ADEVETYLENLK2	3907.3	3673.07	5978.58
A0A8I6GIL4	A0A8I6GIL4	A0A8I6GIL4_RAT	Tmem87a	Transmembrane protein 87A	1	ADEVETYLENLKEK	ADEVETYLENLKEK	3	ADEVETYLENLKEK3	14418.1	11258	15149.4
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	ADEVVWVR	ADEVVWVR	2	ADEVVWVR2	119599	116072	138028
Q62812	Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	ADEWLMK	ADEWLMK	1	ADEWLMK1	308849	378476	338950
Q62812	Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	ADEWLMK	ADEWLMK	2	ADEWLMK2	1.17595e+07	1.28584e+07	1.30655e+07
Q9JM80	Q9JM80	PHAG1_RAT	Pag1	Phosphoprotein associated with glycosphingolipid-enriched microdomains 1	1	ADFAEYASVDR	ADFAEYASVDR	2	ADFAEYASVDR2	14252.3	9786.81	14099.4
P52873	P52873	PYC_RAT	Pc	Pyruvate carboxylase, mitochondrial	1	ADFAQACQDAGVR	ADFAQAC(UniMod:4)QDAGVR	2	ADFAQAC(UniMod:4)QDAGVR2	10691	7195.45	10199.4
Q62812	Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	ADFCIIHYAGK	ADFC(UniMod:4)IIHYAGK	2	ADFC(UniMod:4)IIHYAGK2	1.10032e+06	1.24748e+06	1.20487e+06
Q62812	Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	ADFCIIHYAGK	ADFC(UniMod:4)IIHYAGK	3	ADFC(UniMod:4)IIHYAGK3	8.41955e+06	9.99149e+06	1.04926e+07
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	ADFPAGIPECGTDALR	ADFPAGIPEC(UniMod:4)GTDALR	2	ADFPAGIPEC(UniMod:4)GTDALR2	179649	189613	168566
Q5XIJ5	Q5XIJ5	AB17A_RAT	Abhd17a	Alpha/beta hydrolase domain-containing protein 17A	1	ADFQYGQR	ADFQYGQR	2	ADFQYGQR2	16130.6	17704.5	16239.8
Q5XIG4	Q5XIG4	OCAD1_RAT	Ociad1	OCIA domain-containing protein 1	1	ADFREPNAQVSR	ADFREPNAQVSR	3	ADFREPNAQVSR3	5597.54	2411.95	2335.61
Q5XIG4	Q5XIG4	OCAD1_RAT	Ociad1	OCIA domain-containing protein 1	1	ADFREPNAQVSRPIPDIGGGYIPTEEEWR	ADFREPNAQVSRPIPDIGGGYIPTEEEWR	4	ADFREPNAQVSRPIPDIGGGYIPTEEEWR4	19759.9	21367.6	14885.5
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	ADFSEEYK	ADFSEEYK	2	ADFSEEYK2	63079.8	49337.6	66568.8
A0A8I6A6H8	A0A8I6A6H8	A0A8I6A6H8_RAT	Serpinb6a	Serpin family B member 6A	1	ADFSGIASK	ADFSGIASK	1	ADFSGIASK1	7611.97	9367.63	4752.82
A0A8I6A6H8	A0A8I6A6H8	A0A8I6A6H8_RAT	Serpinb6a	Serpin family B member 6A	1	ADFSGIASK	ADFSGIASK	2	ADFSGIASK2	428971	443687	452283
Q3B7U9	Q3B7U9	FKBP8_RAT	Fkbp8	Peptidyl-prolyl cis-trans isomerase FKBP8	1	ADFVLAANSYDLAIK	ADFVLAANSYDLAIK	2	ADFVLAANSYDLAIK2	10765.1	10453.2	4477.89
Q925N6	Q925N6	IGSF1_RAT	Igsf1	Immunoglobulin superfamily member 1	1	ADFWMPVVR	ADFWMPVVR	2	ADFWMPVVR2	31739.2	34143.6	44793.9
Q6AYB2	Q6AYB2	Q6AYB2_RAT	Sphk2	Sphingosine kinase 2	1	ADGAATYVENR	ADGAATYVENR	2	ADGAATYVENR2	25691.5	23489.5	27865.7
G3V6A9	G3V6A9	G3V6A9_RAT	Mfap4	Microfibril-associated glycoprotein 4-like	1	ADGEYWLGLQNLHLLTLK	ADGEYWLGLQNLHLLTLK	3	ADGEYWLGLQNLHLLTLK3	1.64948e+06	863980	1.94596e+06
G3V6A9	G3V6A9	G3V6A9_RAT	Mfap4	Microfibril-associated glycoprotein 4-like	1	ADGEYWLGLQNLHLLTLK	ADGEYWLGLQNLHLLTLK	4	ADGEYWLGLQNLHLLTLK4	1172.31		1433.38
D4ACC1	D4ACC1	D4ACC1_RAT	Dapp1	Dual adaptor of phosphotyrosine and 3-phosphoinositides 1	1	ADGGSDLFQDLGWYHSNLTR	ADGGSDLFQDLGWYHSNLTR	3	ADGGSDLFQDLGWYHSNLTR3	17278.3	22078.4	11389.2
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	ADGHAATLVMK	ADGHAATLVMK	2	ADGHAATLVMK2	2679.51		
A0A8I5ZKH1	A0A8I5ZKH1	A0A8I5ZKH1_RAT	Ythdc2	RNA helicase	1	ADGIPNDSSDSEMEDR	ADGIPNDSSDSEMEDR	2	ADGIPNDSSDSEMEDR2	2758.24		1343.48
Q66H47	Q66H47	RM24_RAT	Mrpl24	Large ribosomal subunit protein uL24m	1	ADGIVPETWTDGPK	ADGIVPETWTDGPK	2	ADGIVPETWTDGPK2	7906.7	9176.97	10412.5
B0BNN3	B0BNN3	CAH1_RAT	Ca1	Carbonic anhydrase 1	1	ADGLAIIGVLMK	ADGLAIIGVLMK	2	ADGLAIIGVLMK2	8490.9	8576.24	7289.41
P16636	P16636	LYOX_RAT	Lox	Protein-lysine 6-oxidase	1	ADGNAAAQPR	ADGNAAAQPR	2	ADGNAAAQPR2			6756.85
D3ZSY8	D3ZSY8	D3ZSY8_RAT	Tbc1d10b	TBC1 domain family, member 10b	1	ADGPPAPQDGGDR	ADGPPAPQDGGDR	2	ADGPPAPQDGGDR2	77920.5	85257.3	72446
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	ADGSGSVVLR	ADGSGSVVLR	2	ADGSGSVVLR2	367475	469515	412882
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	ADGSQMAEER	ADGSQMAEER	2	ADGSQMAEER2	17964	17739.1	12938.2
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	ADGTCHVTTASLDGESSHK	ADGTC(UniMod:4)HVTTASLDGESSHK	3	ADGTC(UniMod:4)HVTTASLDGESSHK3	14034.7	6089.28	10843.5
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	ADGTCHVTTASLDGESSHK	ADGTC(UniMod:4)HVTTASLDGESSHK	4	ADGTC(UniMod:4)HVTTASLDGESSHK4	28321	41419.2	26028.6
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	ADGTEAQPLVPTGR	ADGTEAQPLVPTGR	2	ADGTEAQPLVPTGR2	9040.27	11927	10503.9
A0A0G2K8K8	A0A0G2K8K8;P20766	A0A0G2K8K8_RAT	Iglc1	Lambda-chain C1-region-like	0	ADGTPITQGVETTQPFK	ADGTPITQGVETTQPFK	2	ADGTPITQGVETTQPFK2	55087.5	61524.8	55255.6
P20766	A0A0G2K8K8;P20766	LAC1_RAT		Ig lambda-1 chain C region	0	ADGTPITQGVETTQPFK	ADGTPITQGVETTQPFK	3	ADGTPITQGVETTQPFK3	5900	5819.75	8609.45
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	ADGTTSAPPPR	ADGTTSAPPPR	2	ADGTTSAPPPR2	46640.3		35134.2
A0A8I6AAY1	A0A8I6AAY1	A0A8I6AAY1_RAT	Cox7a2l	Cytochrome c oxidase subunit 7A2 like	1	ADGVPIHLK	ADGVPIHLK	2	ADGVPIHLK2	26354.7	16056.5	18237
Q00238	Q00238	ICAM1_RAT	Icam1	Intercellular adhesion molecule 1	1	ADGVPLPIGMVK	ADGVPLPIGMVK	2	ADGVPLPIGMVK2	10366.9	8085.37	9790.87
P49242	P49242;M0R6L4	RS3A_RAT	Rps3a	Small ribosomal subunit protein eS1	0	ADGYEPPVQESV	ADGYEPPVQESV	2	ADGYEPPVQESV2	39642.5	37764.1	36414
P62243	D3ZIE1;P62243;M0R7Q5	RS8_RAT	Rps8	Small ribosomal subunit protein eS8	0	ADGYVLEGK	ADGYVLEGK	2	ADGYVLEGK2	34085.5	40352.7	32394.2
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	ADHAHCCVEMGVDMIEAISLVR	ADHAHC(UniMod:4)C(UniMod:4)VEMGVDMIEAISLVR	3	ADHAHC(UniMod:4)C(UniMod:4)VEMGVDMIEAISLVR3	9326.83	4744.13	
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	ADHAHCCVEMGVDMIEAISLVR	ADHAHC(UniMod:4)C(UniMod:4)VEMGVDMIEAISLVR	4	ADHAHC(UniMod:4)C(UniMod:4)VEMGVDMIEAISLVR4	69420.1	45588.2	41447.8
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	ADHAYCCIEMGLGMIK	ADHAYC(UniMod:4)C(UniMod:4)IEMGLGMIK	2	ADHAYC(UniMod:4)C(UniMod:4)IEMGLGMIK2	1593.9	1289.59	
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	ADHAYCCIEMGLGMIK	ADHAYC(UniMod:4)C(UniMod:4)IEMGLGMIK	3	ADHAYC(UniMod:4)C(UniMod:4)IEMGLGMIK3	16967.1	15847.7	7199.17
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	ADHCMVTTDHK	ADHC(UniMod:4)MVTTDHK	2	ADHC(UniMod:4)MVTTDHK2			2321.9
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	ADHCMVTTDHK	ADHC(UniMod:4)MVTTDHK	3	ADHC(UniMod:4)MVTTDHK3			6410.35
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	ADHDFVVQEDFMK	ADHDFVVQEDFMK	2	ADHDFVVQEDFMK2	14092.5	15613.7	10834
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	ADHDFVVQEDFMK	ADHDFVVQEDFMK	3	ADHDFVVQEDFMK3	128310	124078	145615
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	ADHGEPIGR	ADHGEPIGR	1	ADHGEPIGR1	7078.86		2981.02
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	ADHGEPIGR	ADHGEPIGR	2	ADHGEPIGR2	28872.4		21763.7
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	ADHHATNGVVHLIDK	ADHHATNGVVHLIDK	3	ADHHATNGVVHLIDK3	9831.37	8045.1	6060.8
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	ADHHATNGVVHLIDK	ADHHATNGVVHLIDK	4	ADHHATNGVVHLIDK4		38083.4	27137.2
A0A0G2K332	A0A0G2K332	A0A0G2K332_RAT	AABR07034729.1	Ig-like domain-containing protein	1	ADHLFTGIVGDTSNR	ADHLFTGIVGDTSNR	2	ADHLFTGIVGDTSNR2	43726.1	47379.6	34604.2
A0A0G2K332	A0A0G2K332	A0A0G2K332_RAT	AABR07034729.1	Ig-like domain-containing protein	1	ADHLFTGIVGDTSNR	ADHLFTGIVGDTSNR	3	ADHLFTGIVGDTSNR3	272820	224698	244000
A0A0G2K332	A0A0G2K332	A0A0G2K332_RAT	AABR07034729.1	Ig-like domain-containing protein	1	ADHLFTGIVGDTSNRAPGAPAR	ADHLFTGIVGDTSNRAPGAPAR	4	ADHLFTGIVGDTSNRAPGAPAR4			4150.56
P70564	P70564	SPB5_RAT	Serpinb5	Serpin B5	1	ADHPFLFIVR	ADHPFLFIVR	3	ADHPFLFIVR3	4198.89	3011.39	2404.17
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	ADHSQTQGSLHLPTAPYNFTYK	ADHSQTQGSLHLPTAPYNFTYK	3	ADHSQTQGSLHLPTAPYNFTYK3	26565.1	29658.6	27259.2
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	ADHSQTQGSLHLPTAPYNFTYK	ADHSQTQGSLHLPTAPYNFTYK	4	ADHSQTQGSLHLPTAPYNFTYK4	76918.3	110003	95550
P08290	P08290	ASGR2_RAT	Asgr2	Asialoglycoprotein receptor 2	1	ADHSTLLFHLK	ADHSTLLFHLK	2	ADHSTLLFHLK2	8880.51	2638.59	
P08290	P08290	ASGR2_RAT	Asgr2	Asialoglycoprotein receptor 2	1	ADHSTLLFHLK	ADHSTLLFHLK	3	ADHSTLLFHLK3	55884.1	69836.9	31430.2
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ADHVETFLDSTCSSTLQFLEYALK	ADHVETFLDSTC(UniMod:4)SSTLQFLEYALK	3	ADHVETFLDSTC(UniMod:4)SSTLQFLEYALK3	30708.5	42572.1	40393.4
Q8VHK0	Q8VHK0	ACOT8_RAT	Acot8	Acyl-coenzyme A thioesterase 8	1	ADHWMLYECESPWAGGSR	ADHWMLYEC(UniMod:4)ESPWAGGSR	3	ADHWMLYEC(UniMod:4)ESPWAGGSR3		5362.06	
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	ADIAALQLGSSPK	ADIAALQLGSSPK	2	ADIAALQLGSSPK2	259537	277990	289518
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	ADIANLAEEFK	ADIANLAEEFK	2	ADIANLAEEFK2	258698	234617	312674
F1M7Q7	F1M7Q7	F1M7Q7_RAT	Otud4	ubiquitinyl hydrolase 1	1	ADIDLSSGSSGVEGK	ADIDLSSGSSGVEGK	2	ADIDLSSGSSGVEGK2	3836.56	2993.59	7832.89
P62271	D3ZM33;P62271;A0A0G2KA79;D3ZAU6	RS18_RAT	Rps18	Small ribosomal subunit protein uS13	0	ADIDLTK	ADIDLTK	2	ADIDLTK2	24256	25612.1	26213
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	ADIDSYR	ADIDSYR	2	ADIDSYR2	775281	1.00489e+06	906106
A0A0G2JUA5	A0A0G2JUA5	A0A0G2JUA5_RAT	Ahnak	AHNAK nucleoprotein	1	ADIDVSGPK	ADIDVSGPK	2	ADIDVSGPK2	28956.5		14425.9
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	ADIEEIR	ADIEEIR	2	ADIEEIR2	169820	266727	217167
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	ADIEMPFDPSK	ADIEMPFDPSK	2	ADIEMPFDPSK2	8265.45	6885.12	14385
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	ADIEVACYGYEGIDAVK	ADIEVAC(UniMod:4)YGYEGIDAVK	2	ADIEVAC(UniMod:4)YGYEGIDAVK2	28599.5	19136.6	34254.9
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	ADIEVACYGYEGIDAVK	ADIEVAC(UniMod:4)YGYEGIDAVK	3	ADIEVAC(UniMod:4)YGYEGIDAVK3	2495.08	3009.55	
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	ADIFGAYIMLLR	ADIFGAYIMLLR	2	ADIFGAYIMLLR2	4751.77	5413.65	4431.66
A0A8I6GEV9	A0A8I6GEV9	A0A8I6GEV9_RAT	Abce1	ATP binding cassette subfamily E member 1	1	ADIFMFDEPSSYLDVK	ADIFMFDEPSSYLDVK	2	ADIFMFDEPSSYLDVK2	13148		7575.97
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	ADIFVDPVLHTACALDIK	ADIFVDPVLHTAC(UniMod:4)ALDIK	3	ADIFVDPVLHTAC(UniMod:4)ALDIK3	41430.2	34968.5	49210.6
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	ADIGAPSGFK	ADIGAPSGFK	1	ADIGAPSGFK1	5212.19	4964.67	4523.77
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	ADIGAPSGFK	ADIGAPSGFK	2	ADIGAPSGFK2	566507	553747	590371
P01026	P01026	CO3_RAT	C3	Complement C3	1	ADIGCTPGSGK	ADIGC(UniMod:4)TPGSGK	2	ADIGC(UniMod:4)TPGSGK2	3.08641e+06	3.41217e+06	3.12132e+06
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	ADIGDTIVYLVH	ADIGDTIVYLVH	2	ADIGDTIVYLVH2	46528.9	58137	63231
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	ADIGVAMGIVGSDVSK	ADIGVAMGIVGSDVSK	2	ADIGVAMGIVGSDVSK2	39657.6	39493.7	28519.1
D3ZLD7	D3ZLD7	D3ZLD7_RAT	Ppp2r3a	Protein phosphatase 2, regulatory subunit B'', alpha	1	ADIHEMGR	ADIHEMGR	2	ADIHEMGR2	2573.79		1962.4
P55146	P55146	TYRO3_RAT	Tyro3	Tyrosine-protein kinase receptor TYRO3	1	ADIIASSDIEEFLR	ADIIASSDIEEFLR	2	ADIIASSDIEEFLR2	7984.8		4226.8
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	ADIIVSELLGSFADNELSPECLDGAQHFLK	ADIIVSELLGSFADNELSPEC(UniMod:4)LDGAQHFLK	4	ADIIVSELLGSFADNELSPEC(UniMod:4)LDGAQHFLK4	2848.47	3731.33	4398.47
A0A0G2JVP5	A0A0G2JVP5	A0A0G2JVP5_RAT	Paip1	Poly(A) binding protein interacting protein 1	1	ADILQVGLR	ADILQVGLR	2	ADILQVGLR2	33069.7	29744.9	28587.4
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	ADIPGGK	ADIPGGK	1	ADIPGGK1	139804	104682	109596
B0BNM9	B0BNM9	GLTP_RAT	GLTP	Glycolipid transfer protein	1	ADISGNITK	ADISGNITK	2	ADISGNITK2	16148.4	11351.5	10159.2
P04905	P04905	GSTM1_RAT	Gstm1	Glutathione S-transferase Mu 1	1	ADIVENQVMDNR	ADIVENQVMDNR	2	ADIVENQVMDNR2	18238.4	15442.3	19003.7
P51158	P51158	RAB28_RAT	Rab28	Ras-related protein Rab-28	1	ADIVNYNQEPMSR	ADIVNYNQEPMSR	2	ADIVNYNQEPMSR2	4430.65	7014.44	6981.65
P0C1X8	A0A8I6GK59;P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	0	ADIWALGCLLYK	ADIWALGC(UniMod:4)LLYK	2	ADIWALGC(UniMod:4)LLYK2	34293.1	25611.3	40787.3
A0A8I5ZNK2	A0A8I5ZNK2	A0A8I5ZNK2_RAT	Oxsr1	non-specific serine/threonine protein kinase	1	ADIWSFGITAIELATGAAPYHK	ADIWSFGITAIELATGAAPYHK	3	ADIWSFGITAIELATGAAPYHK3	6687.25		
B0LT89	Q6V9V9;B0LT89;A0A8I6GBQ0	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	0	ADIWSLGITAIELAK	ADIWSLGITAIELAK	2	ADIWSLGITAIELAK2	60959.7	51791.5	60835
B0LT89	Q6V9V9;B0LT89;A0A8I6GBQ0	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	0	ADIWSLGITAIELAK	ADIWSLGITAIELAK	3	ADIWSLGITAIELAK3	6291.31	11037.7	6555.68
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	ADIWSLGITLIEMAQIEPPHHELNPMR	ADIWSLGITLIEMAQIEPPHHELNPMR	4	ADIWSLGITLIEMAQIEPPHHELNPMR4	4137.71		
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	ADKAKEVSFDVELPK	ADKAKEVSFDVELPK	4	ADKAKEVSFDVELPK4	2189.85		3808.08
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	ADKDQANDGLSSALLILYLDSAR	ADKDQANDGLSSALLILYLDSAR	3	ADKDQANDGLSSALLILYLDSAR3	14468.6	12684.3	12365.1
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	ADKEVPCYVFDDK	ADKEVPC(UniMod:4)YVFDDK	2	ADKEVPC(UniMod:4)YVFDDK2	5245.38	4353.39	9529.18
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	ADKEVPCYVFDDK	ADKEVPC(UniMod:4)YVFDDK	3	ADKEVPC(UniMod:4)YVFDDK3	29639.2	35642.6	29169.7
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	ADKPLSIHPQGIR	ADKPLSIHPQGIR	2	ADKPLSIHPQGIR2	153105	122674	112029
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	ADKPLSIHPQGIR	ADKPLSIHPQGIR	3	ADKPLSIHPQGIR3	6.15801e+06	6.54865e+06	6.30532e+06
D3ZMI0	D3ZMI0	D3ZMI0_RAT	Angptl8	Angiopoietin-like 8	1	ADKQNHLLWALTGHVQR	ADKQNHLLWALTGHVQR	4	ADKQNHLLWALTGHVQR4	8155.93	17467.8	7865.38
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	ADLAAVEAK	ADLAAVEAK	1	ADLAAVEAK1	1921.93	460.914	3939.89
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	ADLAAVEAK	ADLAAVEAK	2	ADLAAVEAK2	122455	187069	152346
D3Z8W5	D3Z8W5	D3Z8W5_RAT	Ube2l3	Ube2l3 protein	1	ADLAEEYSK	ADLAEEYSK	2	ADLAEEYSK2	51593.8	51361.7	49655
D3Z8W5	D3Z8W5	D3Z8W5_RAT	Ube2l3	Ube2l3 protein	1	ADLAEEYSKDR	ADLAEEYSKDR	3	ADLAEEYSKDR3	23471.6	20750.1	18770.7
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	ADLAEPKPCQR	ADLAEPKPC(UniMod:4)QR	3	ADLAEPKPC(UniMod:4)QR3	8862.66	7004.56	8653.37
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	ADLALIDTPDAESVAESR	ADLALIDTPDAESVAESR	2	ADLALIDTPDAESVAESR2	8149.42	13961	5934.12
M0R4M1	M0R4M1	M0R4M1_RAT	Nlrc5	NLR family, CARD domain containing 5	1	ADLASLANILEHR	ADLASLANILEHR	2	ADLASLANILEHR2		5281.02	1865.12
M0R4M1	M0R4M1	M0R4M1_RAT	Nlrc5	NLR family, CARD domain containing 5	1	ADLASLANILEHR	ADLASLANILEHR	3	ADLASLANILEHR3	5979.64	11100.4	4385.8
Q5BJU0	Q5BJU0	Q5BJU0_RAT	Rras2	RAS related 2	1	ADLDHQR	ADLDHQR	2	ADLDHQR2			12068.7
A0A0G2JUA5	A0A0G2JUA5	A0A0G2JUA5_RAT	Ahnak	AHNAK nucleoprotein	1	ADLDVSGPK	ADLDVSGPK	2	ADLDVSGPK2		21245.7	
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	ADLEAQR	ADLEAQR	2	ADLEAQR2		600508	
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	ADLEAQRDVTYEEAK	ADLEAQRDVTYEEAK	3	ADLEAQRDVTYEEAK3		11563.6	5565.75
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	ADLEDMCGK	ADLEDMC(UniMod:4)GK	2	ADLEDMC(UniMod:4)GK2	100536	87625.9	103418
Q6IFU8	Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	1	ADLEMQIENLK	ADLEMQIENLK	2	ADLEMQIENLK2	3398.91	1014.26	3513.83
Q6IFV1	Q6IFV1	K1C14_RAT	Krt14	Keratin, type I cytoskeletal 14	1	ADLEMQIESLK	ADLEMQIESLK	2	ADLEMQIESLK2	9274.36	9518.11	12826.1
Q6IFV1	Q6IFV1	K1C14_RAT	Krt14	Keratin, type I cytoskeletal 14	1	ADLEMQIESLKEELAYLKK	ADLEMQIESLKEELAYLKK	4	ADLEMQIESLKEELAYLKK4	13981.2	5691.98	3998.86
Q6IFW6	Q6IFW6	K1C10_RAT	Krt10	Keratin, type I cytoskeletal 10	1	ADLEMQIESLTEELAYLK	ADLEMQIESLTEELAYLK	3	ADLEMQIESLTEELAYLK3		9084.1	12317.2
Q6IFW6	Q6IFW6	K1C10_RAT	Krt10	Keratin, type I cytoskeletal 10	1	ADLEMQIESLTEELAYLKK	ADLEMQIESLTEELAYLKK	3	ADLEMQIESLTEELAYLKK3	84865.4	34984.1	43575.7
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	ADLEVLTYYR	ADLEVLTYYR	2	ADLEVLTYYR2	15136.7	17884.3	13947.7
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	ADLGALELWR	ADLGALELWR	2	ADLGALELWR2	161276	154747	171842
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	ADLGLWR	ADLGLWR	2	ADLGLWR2	12884	21502.7	10269.8
P62898	D4A5L9;P62898	CYC_RAT	Cycs	Cytochrome c, somatic	0	ADLIAYLK	ADLIAYLK	2	ADLIAYLK2	669538	589196	622941
P62898	D4A5L9;P62898	CYC_RAT	Cycs	Cytochrome c, somatic	0	ADLIAYLKK	ADLIAYLKK	2	ADLIAYLKK2	5087.37	2379.42	5564.49
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	ADLIDAAGSSLGR	ADLIDAAGSSLGR	2	ADLIDAAGSSLGR2	13104.5	13289.6	23337.6
Q6IV57	Q6IV57	RN141_RAT	Rnf141	RING finger protein 141	1	ADLILPCAHSFCQK	ADLILPC(UniMod:4)AHSFC(UniMod:4)QK	3	ADLILPC(UniMod:4)AHSFC(UniMod:4)QK3		5980.78	
Q68FT7	Q68FT7	Q68FT7_RAT	Farsb	Phenylalanine--tRNA ligase beta subunit	1	ADLINKK	ADLINKK	2	ADLINKK2	6439.53	3347.16	
P34058	A0A8I6GLF3;P82995;P34058;A0A8I5ZYT7	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	ADLINNLGTIAK	ADLINNLGTIAK	2	ADLINNLGTIAK2	5.67555e+06	6.00984e+06	5.74485e+06
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	ADLIVTTPEK	ADLIVTTPEK	2	ADLIVTTPEK2	20070.7	22424.1	32794
Q99P74	Q99P74	RB27B_RAT	Rab27b	Ras-related protein Rab-27B	1	ADLLDQR	ADLLDQR	2	ADLLDQR2	2.89204e+06	3.11688e+06	3.3097e+06
Q920F5	Q920F5	DCMC_RAT	Mlycd	Malonyl-CoA decarboxylase, mitochondrial	1	ADLLEAQALK	ADLLEAQALK	2	ADLLEAQALK2	7827.92	3666.13	4682.98
Q9QZR8	Q9QZR8	PDZD2_RAT	Pdzd2	PDZ domain-containing protein 2	1	ADLLVSEATQPQGICEK	ADLLVSEATQPQGIC(UniMod:4)EK	2	ADLLVSEATQPQGIC(UniMod:4)EK2	3201.58		3576.08
Q4FZY0	Q4FZY0	EFHD2_RAT	Efhd2	EF-hand domain-containing protein D2	1	ADLNQGIGEPQSPSR	ADLNQGIGEPQSPSR	2	ADLNQGIGEPQSPSR2	46759.6	37186.5	35186.8
Q4FZY0	Q4FZY0	EFHD2_RAT	Efhd2	EF-hand domain-containing protein D2	1	ADLNQGIGEPQSPSRR	ADLNQGIGEPQSPSRR	3	ADLNQGIGEPQSPSRR3	18216.1	21097	13637.7
A0A8I5ZTN5	A0A8I5ZTN5	A0A8I5ZTN5_RAT	Adsl	Adenylosuccinate lyase	1	ADLPTLGFTHFQPAQLTTVGK	ADLPTLGFTHFQPAQLTTVGK	3	ADLPTLGFTHFQPAQLTTVGK3	11336	14336.8	15693.2
P26431	P26431	SL9A1_RAT	Slc9a1	Sodium/hydrogen exchanger 1	1	ADLPVITIDPASPQSPESVDLVNEELK	ADLPVITIDPASPQSPESVDLVNEELK	3	ADLPVITIDPASPQSPESVDLVNEELK3	20792	28873	28448.7
P26431	P26431	SL9A1_RAT	Slc9a1	Sodium/hydrogen exchanger 1	1	ADLPVITIDPASPQSPESVDLVNEELKGK	ADLPVITIDPASPQSPESVDLVNEELKGK	4	ADLPVITIDPASPQSPESVDLVNEELKGK4		9786.86	13246.8
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	ADLQGSASPSK	ADLQGSASPSK	2	ADLQGSASPSK2		57454.5	
Q5M887	Q5M887	TPC13_RAT	Trappc13	Trafficking protein particle complex subunit 13	1	ADLQTSSQR	ADLQTSSQR	2	ADLQTSSQR2	35138.1		46924.5
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	ADLRDEGVYTCSATNLAGESK	ADLRDEGVYTC(UniMod:4)SATNLAGESK	3	ADLRDEGVYTC(UniMod:4)SATNLAGESK3	22258	26183.3	24077.9
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	ADLSAMQSWVAR	ADLSAMQSWVAR	2	ADLSAMQSWVAR2	386575	456792	459573
Q6AYF8	Q6AYF8	Q6AYF8_RAT	Serpinb9	Serpin family B member 9	1	ADLSAMSPER	ADLSAMSPER	2	ADLSAMSPER2	49279.9	48169.1	50939.9
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ADLSGLYSPIK	ADLSGLYSPIK	2	ADLSGLYSPIK2	2.43454e+06	2.88992e+06	2.73999e+06
D3ZJI7	D3ZJI7	D3ZJI7_RAT	Serpinb11	Serpin family B member 11	1	ADLSGMSPDK	ADLSGMSPDK	2	ADLSGMSPDK2	15453.6	12772.5	15192.1
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	ADLTALFLPR	ADLTALFLPR	2	ADLTALFLPR2	602932	666365	641777
D3ZQI6	D3ZQI6	D3ZQI6_RAT	Xpo4	Exportin 4	1	ADLTHLLSPQMGK	ADLTHLLSPQMGK	3	ADLTHLLSPQMGK3	6932.48	9876.22	5945.06
F1LT49	F1LT49	F1LT49_RAT	Lrrc47	Leucine rich repeat containing 47	1	ADLVTLPPYVTVVR	ADLVTLPPYVTVVR	2	ADLVTLPPYVTVVR2	17916.5	32236.2	28331.7
D4AD37	D4AD37	IMPA3_RAT	Bpnt2	Golgi-resident adenosine 3',5'-bisphosphate 3'-phosphatase	1	ADLYIHVTYIK	ADLYIHVTYIK	2	ADLYIHVTYIK2	4374.95		1984.12
D4AD37	D4AD37	IMPA3_RAT	Bpnt2	Golgi-resident adenosine 3',5'-bisphosphate 3'-phosphatase	1	ADLYIHVTYIK	ADLYIHVTYIK	3	ADLYIHVTYIK3	15004.4	12541.5	11446.7
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	ADLYLEGK	ADLYLEGK	2	ADLYLEGK2	27205.4	30200.6	31638.5
Q497B0	Q497B0	NIT2_RAT	Nit2	Omega-amidase NIT2	1	ADLYSVESK	ADLYSVESK	2	ADLYSVESK2	7276.79	8596.2	
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	ADMANEDLLSDGTNENESGFWDSFK	ADMANEDLLSDGTNENESGFWDSFK	3	ADMANEDLLSDGTNENESGFWDSFK3	8172.34	8555.2	13143.4
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	ADMEGLIAEK	ADMEGLIAEK	2	ADMEGLIAEK2	10493	7482.33	13109.8
Q5XHY5	Q5XHY5	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	1	ADMETLQR	ADMETLQR	2	ADMETLQR2	19389.8	11935.9	19625.3
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	ADMGGAATICSAIVSAAK	ADMGGAATIC(UniMod:4)SAIVSAAK	2	ADMGGAATIC(UniMod:4)SAIVSAAK2	6971.51	10672.3	13935.1
Q4V8H8	Q4V8H8	EHD2_RAT	Ehd2	EH domain-containing protein 2	1	ADMVETQQLMR	ADMVETQQLMR	2	ADMVETQQLMR2	3276.44	3216.42	2753.09
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	ADMVIEAVFEDLAVK	ADMVIEAVFEDLAVK	2	ADMVIEAVFEDLAVK2	12896.9	15314.4	18463.7
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	ADMVIEAVFEDLAVK	ADMVIEAVFEDLAVK	3	ADMVIEAVFEDLAVK3	9603.36	9681.47	3990.56
A0A0G2K2M3	A0A0G2K2M3	A0A0G2K2M3_RAT	Stat6	Signal transducer and activator of transcription	1	ADMVTEK	ADMVTEK	2	ADMVTEK2	13496.3	15951.4	16590.1
O54857	O54857	PTEN_RAT	Pten	Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN	1	ADNDKEYLVLTLTK	ADNDKEYLVLTLTK	3	ADNDKEYLVLTLTK3	31369.5	28994.4	23778.9
P38652	P38652	PGM1_RAT	Pgm1	Phosphoglucomutase-1	1	ADNFEYSDPVDGSISK	ADNFEYSDPVDGSISK	2	ADNFEYSDPVDGSISK2	3928.49	2793.18	2721.88
A0A0G2K3Y6	A0A0G2K3Y6	A0A0G2K3Y6_RAT	Cpeb4	Cytoplasmic polyadenylation element binding protein 4	1	ADNIFPFPDRPR	ADNIFPFPDRPR	3	ADNIFPFPDRPR3	5181.3	9468.36	9039.05
A0A8I6A0R8	A0A8I6A0R8	A0A8I6A0R8_RAT	Srl	Sarcalumenin	1	ADNLATQMLMR	ADNLATQMLMR	2	ADNLATQMLMR2	9802.73	14966.1	11194.1
Q6AYK3	Q6AYK3	INO1_RAT	Isyna1	Inositol-3-phosphate synthase 1	1	ADNLIPGTR	ADNLIPGTR	2	ADNLIPGTR2	11340.8	13745.8	17643.4
Q5PQM0	Q5PQM0	TM168_RAT	Tmem168	Transmembrane protein 168	1	ADNNSLDR	ADNNSLDR	2	ADNNSLDR2	15006		16988.9
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	ADNSVSLIVPLLYDAELHLTR	ADNSVSLIVPLLYDAELHLTR	3	ADNSVSLIVPLLYDAELHLTR3	44813.2	41395.4	58114.7
D4A7R3	D4A7R3	D4A7R3_RAT	Nup205	Nucleoporin 205	1	ADNVVNIAR	ADNVVNIAR	2	ADNVVNIAR2	6741.68	9372.04	4410.93
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	ADPDFECGWCQSPGQCTLR	ADPDFEC(UniMod:4)GWC(UniMod:4)QSPGQC(UniMod:4)TLR	3	ADPDFEC(UniMod:4)GWC(UniMod:4)QSPGQC(UniMod:4)TLR3	10208.9	25923.3	32559.5
B0LT89	B0LT89	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	1	ADPEELFTK	ADPEELFTK	2	ADPEELFTK2	887089	798992	861820
Q5U2Z3	Q5U2Z3	NP1L4_RAT	Nap1l4	Nucleosome assembly protein 1-like 4	1	ADPFSFEGPEIVDCDGCTIDWK	ADPFSFEGPEIVDC(UniMod:4)DGC(UniMod:4)TIDWK	3	ADPFSFEGPEIVDC(UniMod:4)DGC(UniMod:4)TIDWK3	17670.7	30837.3	22930.3
Q5U2Z3	Q5U2Z3	NP1L4_RAT	Nap1l4	Nucleosome assembly protein 1-like 4	1	ADPFSFEGPEIVDCDGCTIDWKK	ADPFSFEGPEIVDC(UniMod:4)DGC(UniMod:4)TIDWKK	3	ADPFSFEGPEIVDC(UniMod:4)DGC(UniMod:4)TIDWKK3	25760.7		45021.8
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	ADPFSFK	ADPFSFK	2	ADPFSFK2	55530.6	50135.6	50959.8
Q5BK07	Q5BK07	CCD43_RAT	Ccdc43	Coiled-coil domain-containing protein 43	1	ADPGASTANIGSDK	ADPGASTANIGSDK	2	ADPGASTANIGSDK2	95038.8	99730.7	99533.8
A0A8I6AE78	A0A8I6AE78	A0A8I6AE78_RAT	Hgsnat	Heparan-alpha-glucosaminide N-acetyltransferase	1	ADPLGADCQPETR	ADPLGADC(UniMod:4)QPETR	2	ADPLGADC(UniMod:4)QPETR2	3292.67	5867.05	
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	ADPQEAINCLMR	ADPQEAINC(UniMod:4)LMR	2	ADPQEAINC(UniMod:4)LMR2	144153	118413	93071.7
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	ADPQEAINCLMR	ADPQEAINC(UniMod:4)LMR	3	ADPQEAINC(UniMod:4)LMR3	4670.33	8311.31	7637.24
Q5BJT7	Q5BJT7	CCD93_RAT	Ccdc93	Coiled-coil domain-containing protein 93	1	ADPSILQNLR	ADPSILQNLR	2	ADPSILQNLR2	25012.6	17195	36736.7
Q9QY17	Q9QY17	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	1	ADPSLNPEQLK	ADPSLNPEQLK	2	ADPSLNPEQLK2	231697	212490	233600
Q9QY17	Q9QY17	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	1	ADPSLNPEQLKK	ADPSLNPEQLKK	3	ADPSLNPEQLKK3	77596.4	77377.3	84181.9
D3Z8E0	F1M7N7;D3Z8E0	D3Z8E0_RAT	Rps6ka3	Ribosomal protein S6 kinase	0	ADPSQFELLK	ADPSQFELLK	2	ADPSQFELLK2	18809.9	17901.3	15523.4
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	ADPSQPPSALGYTWNIPIK	ADPSQPPSALGYTWNIPIK	3	ADPSQPPSALGYTWNIPIK3	14535.1	13907.2	15939.8
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	ADPYTADEGSGEGHK	ADPYTADEGSGEGHK	3	ADPYTADEGSGEGHK3		15791.2	
Q62720	Q62720	ZNT1_RAT	Slc30a1	Proton-coupled zinc antiporter SLC30A1	1	ADQAEPEKLR	ADQAEPEKLR	2	ADQAEPEKLR2	1134.1	3955.53	3585.89
Q62720	Q62720	ZNT1_RAT	Slc30a1	Proton-coupled zinc antiporter SLC30A1	1	ADQAEPEKLR	ADQAEPEKLR	3	ADQAEPEKLR3	23292.2	30140.1	21743.9
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	ADQCYEDVR	ADQC(UniMod:4)YEDVR	2	ADQC(UniMod:4)YEDVR2	456181	370135	422939
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	ADQDSEAMK	ADQDSEAMK	2	ADQDSEAMK2	488666		421015
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	ADQDSEAMKR	ADQDSEAMKR	2	ADQDSEAMKR2			7383.62
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	ADQDSEAMKR	ADQDSEAMKR	3	ADQDSEAMKR3			26830.3
O35353	O35353	GBB4_RAT	Gnb4	Guanine nucleotide-binding protein subunit beta-4	1	ADQELLLYSHDNIICGITSVAFSK	ADQELLLYSHDNIIC(UniMod:4)GITSVAFSK	3	ADQELLLYSHDNIIC(UniMod:4)GITSVAFSK3	62061.6	53729.7	41387.3
P54313	P54313	GBB2_RAT	Gnb2	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2	1	ADQELLMYSHDNIICGITSVAFSR	ADQELLMYSHDNIIC(UniMod:4)GITSVAFSR	3	ADQELLMYSHDNIIC(UniMod:4)GITSVAFSR3	165487	104973	106841
P54313	P54313	GBB2_RAT	Gnb2	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2	1	ADQELLMYSHDNIICGITSVAFSR	ADQELLMYSHDNIIC(UniMod:4)GITSVAFSR	4	ADQELLMYSHDNIIC(UniMod:4)GITSVAFSR4	6827.19	7625.01	8354.61
P54311	P54311	GBB1_RAT	Gnb1	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1	1	ADQELMTYSHDNIICGITSVSFSK	ADQELMTYSHDNIIC(UniMod:4)GITSVSFSK	3	ADQELMTYSHDNIIC(UniMod:4)GITSVSFSK3	81707.3	82403.5	65922.6
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	ADQFIAR	ADQFIAR	2	ADQFIAR2	11014.3	11851	13632.1
Q8R491	Q8R491;Q641Z6	EHD3_RAT	Ehd3	EH domain-containing protein 3	0	ADQIETQQLMR	ADQIETQQLMR	2	ADQIETQQLMR2	341603	289654	305407
A0A8I6AS17	A0A8I6AS17	A0A8I6AS17_RAT	Bsdc1	BSD domain containing 1	1	ADQSISEEPGWEEEEEELER	ADQSISEEPGWEEEEEELER	3	ADQSISEEPGWEEEEEELER3	11953.2	11967.2	16701.3
Q8R3Z7	Q8R3Z7	Q8R3Z7_RAT	Ehd4	EH-domain containing 4	1	ADQVDTQQLMR	ADQVDTQQLMR	2	ADQVDTQQLMR2	53602.7	44344.7	51680.3
P63322	P63322	RALA_RAT	Rala	Ras-related protein Ral-A	1	ADQWNVNYVETSAK	ADQWNVNYVETSAK	2	ADQWNVNYVETSAK2	112208	83545.7	102614
P63322	P63322	RALA_RAT	Rala	Ras-related protein Ral-A	1	ADQWNVNYVETSAK	ADQWNVNYVETSAK	3	ADQWNVNYVETSAK3	4218.78	5248.95	7620.92
P13471	P13471	RS14_RAT	Rps14	Small ribosomal subunit protein uS11	1	ADRDESSPYAAMLAAQDVAQR	ADRDESSPYAAMLAAQDVAQR	3	ADRDESSPYAAMLAAQDVAQR3	22974	22183.9	28820.1
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	ADRDQYELLCLDNTR	ADRDQYELLC(UniMod:4)LDNTR	2	ADRDQYELLC(UniMod:4)LDNTR2	100410	107860	102791
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	ADRDQYELLCLDNTR	ADRDQYELLC(UniMod:4)LDNTR	3	ADRDQYELLC(UniMod:4)LDNTR3	2.78337e+06	2.65625e+06	2.67655e+06
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	ADRDQYELLCLDNTR	ADRDQYELLC(UniMod:4)LDNTR	4	ADRDQYELLC(UniMod:4)LDNTR4	2260.9	3276.92	
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	ADRDQYELLCLDNTRK	ADRDQYELLC(UniMod:4)LDNTRK	4	ADRDQYELLC(UniMod:4)LDNTRK4		2573.17	2157.48
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	ADRDQYELLCPDNTR	ADRDQYELLC(UniMod:4)PDNTR	2	ADRDQYELLC(UniMod:4)PDNTR2	5254.56		
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	ADRDQYELLCPDNTR	ADRDQYELLC(UniMod:4)PDNTR	3	ADRDQYELLC(UniMod:4)PDNTR3	192791	211156	203125
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	ADRENADIIR	ADRENADIIR	3	ADRENADIIR3	59263.5	45208.7	61773.8
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	ADSAMNQCPVHFIQHGK	ADSAMNQC(UniMod:4)PVHFIQHGK	3	ADSAMNQC(UniMod:4)PVHFIQHGK3	16801.6	15498.6	12325.9
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	ADSAMNQCPVHFIQHGK	ADSAMNQC(UniMod:4)PVHFIQHGK	4	ADSAMNQC(UniMod:4)PVHFIQHGK4	60362.9	41131.3	69360.7
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	ADSDGPDFQTIHDNTK	ADSDGPDFQTIHDNTK	2	ADSDGPDFQTIHDNTK2		3327.22	
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	ADSDGPDFQTIHDNTK	ADSDGPDFQTIHDNTK	3	ADSDGPDFQTIHDNTK3		5466.7	
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	ADSEASSGPLLDDK	ADSEASSGPLLDDK	2	ADSEASSGPLLDDK2	65795.1	61719.6	73384.4
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	ADSEVIEK	ADSEVIEK	2	ADSEVIEK2	239514	264338	209507
P08650	P08650	CO5_RAT	C5	Complement C5	1	ADSFLLER	ADSFLLER	2	ADSFLLER2	869242	728372	646500
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	ADSFSSPGK	ADSFSSPGK	2	ADSFSSPGK2	11277	16525.9	15285.6
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	ADSGVHLCVIDDSNEHMLTVWDWQR	ADSGVHLC(UniMod:4)VIDDSNEHMLTVWDWQR	4	ADSGVHLC(UniMod:4)VIDDSNEHMLTVWDWQR4	8080.42	7559.96	
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	ADSHFRHGIPFFVK	ADSHFRHGIPFFVK	3	ADSHFRHGIPFFVK3	5704.43	4582.75	9043.54
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	ADSHFRHGIPFFVK	ADSHFRHGIPFFVK	4	ADSHFRHGIPFFVK4	82847.3	117631	142391
P14046	Q6IE52;A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	ADSHFRHGIPFFVKVR	ADSHFRHGIPFFVKVR	4	ADSHFRHGIPFFVKVR4	11363.5	10521.3	12718.4
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	ADSIQTTAR	ADSIQTTAR	2	ADSIQTTAR2	584702	661723	784488
F7ETC0	F7ETC0	F7ETC0_RAT	Smpd1	Sphingomyelin phosphodiesterase	1	ADSPALCR	ADSPALC(UniMod:4)R	2	ADSPALC(UniMod:4)R2	20488.2	24886.8	27348.2
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	ADSQNAAEETELETQK	ADSQNAAEETELETQK	2	ADSQNAAEETELETQK2	41277.8	47688.7	48379.9
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	ADSQNAAEETELETQK	ADSQNAAEETELETQK	3	ADSQNAAEETELETQK3	11927	14556.8	11720.5
Q6AY97	Q6AY97	CCD91_RAT	Ccdc91	Coiled-coil domain-containing protein 91	1	ADSSLVNQTISK	ADSSLVNQTISK	2	ADSSLVNQTISK2	6479.1	2723.57	8311.5
Q9Z136	Q9Z136	TSC1_RAT	Tsc1	Hamartin	1	ADSSRPYLPR	ADSSRPYLPR	3	ADSSRPYLPR3		21304.2	25427.3
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	ADSSSDEAVADTSR	ADSSSDEAVADTSR	2	ADSSSDEAVADTSR2	19934.9	16550.9	9581.23
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	ADSSSDEAVADTSRR	ADSSSDEAVADTSRR	3	ADSSSDEAVADTSRR3	29853	39721.7	
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	ADSSSVLPSPLSISTK	ADSSSVLPSPLSISTK	2	ADSSSVLPSPLSISTK2	87353.2	97587.7	92923
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	ADSVEQQDGAALEK	ADSVEQQDGAALEK	2	ADSVEQQDGAALEK2	13029.4	9926.15	6561.35
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ADSVVDLFSYSVQGSGETTYDSK	ADSVVDLFSYSVQGSGETTYDSK	3	ADSVVDLFSYSVQGSGETTYDSK3	122141	141147	154512
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	ADSVVVLLCR	ADSVVVLLC(UniMod:4)R	2	ADSVVVLLC(UniMod:4)R2	14498.5	13412.7	11473.4
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	ADSYDRGDLENQMHIAEQR	ADSYDRGDLENQMHIAEQR	3	ADSYDRGDLENQMHIAEQR3		2419.39	
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	ADSYDRGDLENQMHIAEQR	ADSYDRGDLENQMHIAEQR	4	ADSYDRGDLENQMHIAEQR4	10838.8	7953.47	7938.22
B2GUY0	B2GUY0	MA1B1_RAT	Man1b1	Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase	1	ADSYYEYLLK	ADSYYEYLLK	2	ADSYYEYLLK2	8236.95	15930.4	17544.6
P18645	P18645	GALE_RAT	Gale	UDP-glucose 4-epimerase	1	ADTAWNAVLLR	ADTAWNAVLLR	2	ADTAWNAVLLR2	14195.9	10986.6	20621.5
A0A0G2JVT8	A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	1	ADTFSGLLEYLNPNHK	ADTFSGLLEYLNPNHK	3	ADTFSGLLEYLNPNHK3	12961.8	3323.91	6028.99
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	ADTGDAPVPAPAGDQK	ADTGDAPVPAPAGDQK	2	ADTGDAPVPAPAGDQK2	238732	229004	246666
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	ADTGDAPVPAPAGDQK	ADTGDAPVPAPAGDQK	3	ADTGDAPVPAPAGDQK3	11662.5	5861.72	4481.02
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	ADTIATIEK	ADTIATIEK	2	ADTIATIEK2	99083.5	102336	82541.4
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	ADTIDTIEK	ADTIDTIEK	2	ADTIDTIEK2	133035	151808	145343
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	ADTIDTIEKEIR	ADTIDTIEKEIR	3	ADTIDTIEKEIR3	1339.89	6442.24	5713.11
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	ADTLDPALLRPGR	ADTLDPALLRPGR	2	ADTLDPALLRPGR2	26800.2	28458.6	40214.2
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	ADTLDPALLRPGR	ADTLDPALLRPGR	3	ADTLDPALLRPGR3	376216	382802	443996
Q91Y81	Q91Y81	SEPT2_RAT	Septin2	Septin-2	1	ADTLTLK	ADTLTLK	2	ADTLTLK2	100947	91445.8	82855.8
Q9WVC0	Q9WVC0;A0A8I5ZW51;A0A8I6ARI4	SEPT7_RAT	Septin7	Septin-7	0	ADTLTPEECQQFK	ADTLTPEEC(UniMod:4)QQFK	2	ADTLTPEEC(UniMod:4)QQFK2	182617	140576	162384
Q9WVC0	Q9WVC0;A0A8I5ZW51;A0A8I6ARI4	SEPT7_RAT	Septin7	Septin-7	0	ADTLTPEECQQFK	ADTLTPEEC(UniMod:4)QQFK	3	ADTLTPEEC(UniMod:4)QQFK3	1869.76	2435.87	4530.92
Q9WVC0	Q9WVC0;A0A8I5ZW51;A0A8I6ARI4	SEPT7_RAT	Septin7	Septin-7	0	ADTLTPEECQQFKK	ADTLTPEEC(UniMod:4)QQFKK	2	ADTLTPEEC(UniMod:4)QQFKK2	3383.32	2686.39	1514.21
Q9WVC0	Q9WVC0;A0A8I5ZW51;A0A8I6ARI4	SEPT7_RAT	Septin7	Septin-7	0	ADTLTPEECQQFKK	ADTLTPEEC(UniMod:4)QQFKK	3	ADTLTPEEC(UniMod:4)QQFKK3	69912.7	53792.5	90666.8
D3ZKG1	D3ZKG1	D3ZKG1_RAT	Mmut	Methylmalonyl-CoA mutase, mitochondrial	1	ADTMDLPEELPGVKPFTR	ADTMDLPEELPGVKPFTR	3	ADTMDLPEELPGVKPFTR3	4233.3		5738.64
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	ADTNTIYTNCWVTGWGYTK	ADTNTIYTNC(UniMod:4)WVTGWGYTK	3	ADTNTIYTNC(UniMod:4)WVTGWGYTK3	73270.6	64659.7	59042.7
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	ADTPSLGEGPEK	ADTPSLGEGPEK	2	ADTPSLGEGPEK2	681273	620763	683051
Q9R064	Q9R064	GORS2_RAT	Gorasp2	Golgi reassembly-stacking protein 2	1	ADTSSLTVDVMSPASK	ADTSSLTVDVMSPASK	2	ADTSSLTVDVMSPASK2	53407.7	52123.6	57328.5
A0A8I5ZQZ1	A0A8I5ZQZ1	A0A8I5ZQZ1_RAT	Nufip2	Nuclear FMR1 interacting protein 2	1	ADTSSQGALVFLSK	ADTSSQGALVFLSK	2	ADTSSQGALVFLSK2	1413.25	2459.39	3082.14
G3V8Y8	G3V8Y8	G3V8Y8_RAT	Hip1	Huntingtin interacting protein 1	1	ADTTAIANCLGK	ADTTAIANC(UniMod:4)LGK	2	ADTTAIANC(UniMod:4)LGK2		5080.66	3789.56
P36953	P36953	AFAM_RAT	Afm	Afamin	1	ADTTYALPSVSALVSALR	ADTTYALPSVSALVSALR	2	ADTTYALPSVSALVSALR2	176654	181085	176799
P36953	P36953	AFAM_RAT	Afm	Afamin	1	ADTTYALPSVSALVSALR	ADTTYALPSVSALVSALR	3	ADTTYALPSVSALVSALR3	28065.4	21530.8	25364
A0A0G2K0G9	A0A0G2K0G9	A0A0G2K0G9_RAT	Rin3	Ras and Rab interactor 3	1	ADTVAQALCAQCAEK	ADTVAQALC(UniMod:4)AQC(UniMod:4)AEK	2	ADTVAQALC(UniMod:4)AQC(UniMod:4)AEK2	6090.06		4339.15
A0A0G2K0G9	A0A0G2K0G9	A0A0G2K0G9_RAT	Rin3	Ras and Rab interactor 3	1	ADTVAQALCAQCAEK	ADTVAQALC(UniMod:4)AQC(UniMod:4)AEK	3	ADTVAQALC(UniMod:4)AQC(UniMod:4)AEK3	1863.14	3105.67	2793.44
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ADTVATVQGVEFSHR	ADTVATVQGVEFSHR	2	ADTVATVQGVEFSHR2	69649.6	65218.6	70699
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ADTVATVQGVEFSHR	ADTVATVQGVEFSHR	3	ADTVATVQGVEFSHR3	1.13747e+06	1.42101e+06	1.42304e+06
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	ADTVGLACEAINR	ADTVGLAC(UniMod:4)EAINR	2	ADTVGLAC(UniMod:4)EAINR2	9376.91	5945.64	5786.39
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	ADTVQEATFQVELPR	ADTVQEATFQVELPR	2	ADTVQEATFQVELPR2	412807	356407	342245
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	ADTVQEATFQVELPR	ADTVQEATFQVELPR	3	ADTVQEATFQVELPR3	578550	652157	515220
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	ADTVQEATFQVELPRK	ADTVQEATFQVELPRK	3	ADTVQEATFQVELPRK3	82338.2	93213.7	82002.8
O35777	O35777	MAGT1_RAT	Magt1	Magnesium transporter protein 1	1	ADTYELQVR	ADTYELQVR	2	ADTYELQVR2	5665.74	7058.12	4778.4
A0A8I5ZZ05	A0A8I5ZZ05	A0A8I5ZZ05_RAT	Soga1	Suppressor of glucose, autophagy associated 1	1	ADVALGSSGK	ADVALGSSGK	2	ADVALGSSGK2	12100.6	13642.8	7555.04
Q5FWU3	Q5FWU3	ATG9A_RAT	Atg9a	Autophagy-related protein 9A	1	ADVASALR	ADVASALR	2	ADVASALR2	8750.25	10418.1	10007
Q9WTV5	Q9WTV5	PSMD9_RAT	Psmd9	26S proteasome non-ATPase regulatory subunit 9	1	ADVDLYQVR	ADVDLYQVR	2	ADVDLYQVR2	56414.3	67544	66096
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	ADVDMVDK	ADVDMVDK	2	ADVDMVDK2	80883	93276.8	59166.7
A0A8I5ZNG4	A0A8I5ZNG4	A0A8I5ZNG4_RAT	Rictor	RPTOR independent companion of MTOR, complex 2	1	ADVELER	ADVELER	2	ADVELER2	8666.84	6917.82	17989.4
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	ADVFHAYLSLLK	ADVFHAYLSLLK	2	ADVFHAYLSLLK2	17912.4	17988.5	13079.9
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	ADVFHAYLSLLK	ADVFHAYLSLLK	3	ADVFHAYLSLLK3	177957	178529	138098
P11505	Q64542;Q64568;P11505;P11506	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	0	ADVGFAMGIAGTDVAK	ADVGFAMGIAGTDVAK	2	ADVGFAMGIAGTDVAK2	2331.43	4522.17	3190.82
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	ADVIPVHYYLIPPPTK	ADVIPVHYYLIPPPTK	2	ADVIPVHYYLIPPPTK2	6086.95	6309.41	9428.89
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	ADVIPVHYYLIPPPTK	ADVIPVHYYLIPPPTK	3	ADVIPVHYYLIPPPTK3	72692.8	64215.3	78991.5
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	ADVKGHGALNDLTFTEEVDMK	ADVKGHGALNDLTFTEEVDMK	4	ADVKGHGALNDLTFTEEVDMK4	3432.37	7751.1	4854.51
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	ADVKPYDVTR	ADVKPYDVTR	2	ADVKPYDVTR2	19200.6	11665.8	20379.8
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	ADVKPYDVTR	ADVKPYDVTR	3	ADVKPYDVTR3	70572.6	65771.7	70165.4
Q8CGU6	Q8CGU6	NICA_RAT	Ncstn	Nicastrin	1	ADVLFVAPR	ADVLFVAPR	2	ADVLFVAPR2	32032.4	25278.5	38326.2
A0A8I6AAA9	A0A8I6AAA9	A0A8I6AAA9_RAT	Lrch1	Leucine rich repeats and calponin homology domain containing 1	1	ADVLHCELMNYIK	ADVLHC(UniMod:4)ELMNYIK	3	ADVLHC(UniMod:4)ELMNYIK3	9562.03	12580.4	22233.4
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	ADVLSEASR	ADVLSEASR	2	ADVLSEASR2	22259.3	25893	35061.2
Q9WTT7	Q9WTT7	5MP1_RAT	Bzw2	eIF5-mimic protein 1	1	ADVLSEEAILK	ADVLSEEAILK	2	ADVLSEEAILK2	20513.7	12881.5	13889.6
D3ZL50	D3ZL50	D3ZL50_RAT	Skic3	Tetratricopeptide repeat domain 37	1	ADVSCLWK	ADVSC(UniMod:4)LWK	2	ADVSC(UniMod:4)LWK2	7132.04	8355.34	6429.68
D4A0G7	D4A0G7	D4A0G7_RAT	Rab37	RAB37, member RAS oncogene family	1	ADVSSER	ADVSSER	2	ADVSSER2			58954
P14423	P14423	PA2GA_RAT	Pla2g2a	Phospholipase A2, membrane associated	1	ADVSYGFYGCHCGVGGR	ADVSYGFYGC(UniMod:4)HC(UniMod:4)GVGGR	2	ADVSYGFYGC(UniMod:4)HC(UniMod:4)GVGGR2	11861.9	8429.5	9434.34
P14423	P14423	PA2GA_RAT	Pla2g2a	Phospholipase A2, membrane associated	1	ADVSYGFYGCHCGVGGR	ADVSYGFYGC(UniMod:4)HC(UniMod:4)GVGGR	3	ADVSYGFYGC(UniMod:4)HC(UniMod:4)GVGGR3	476227	398654	467752
Q6AYB4	Q6AYB4	HSP7E_RAT	Hspa14	Heat shock 70 kDa protein 14	1	ADVVANDAGDR	ADVVANDAGDR	2	ADVVANDAGDR2	10157.4	10314.5	8265.39
P16086	P16086;D4A678	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	0	ADVVESWIGEK	ADVVESWIGEK	2	ADVVESWIGEK2	810306	770924	793232
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	ADVVESWIGEKENSLK	ADVVESWIGEKENSLK	2	ADVVESWIGEKENSLK2	3721.69	4396.03	5566.29
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	ADVVESWIGEKENSLK	ADVVESWIGEKENSLK	3	ADVVESWIGEKENSLK3	164716	179810	200633
Q4V8F9	Q4V8F9	HSDL2_RAT	Hsdl2	Hydroxysteroid dehydrogenase-like protein 2	1	ADVVMSMATEDFVK	ADVVMSMATEDFVK	2	ADVVMSMATEDFVK2	125431	109278	101193
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	ADVVVLAGAVCDFR	ADVVVLAGAVC(UniMod:4)DFR	2	ADVVVLAGAVC(UniMod:4)DFR2	17150.9	22606.4	23206.5
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	ADVVVLAGAVCDFR	ADVVVLAGAVC(UniMod:4)DFR	3	ADVVVLAGAVC(UniMod:4)DFR3		3768.89	2863.85
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	ADVWSLGITLIEMAEIEPPHHELNPMR	ADVWSLGITLIEMAEIEPPHHELNPMR	4	ADVWSLGITLIEMAEIEPPHHELNPMR4	7526.31		
P36953	P36953	AFAM_RAT	Afm	Afamin	1	ADWCQPLK	ADWC(UniMod:4)QPLK	2	ADWC(UniMod:4)QPLK2	64622.6	67368.8	76049.9
P36953	P36953	AFAM_RAT	Afm	Afamin	1	ADWCQPLKEDLQNK	ADWC(UniMod:4)QPLKEDLQNK	2	ADWC(UniMod:4)QPLKEDLQNK2	16360.6	15599.4	8800.18
P36953	P36953	AFAM_RAT	Afm	Afamin	1	ADWCQPLKEDLQNK	ADWC(UniMod:4)QPLKEDLQNK	3	ADWC(UniMod:4)QPLKEDLQNK3	75364.3	99485.9	74668.3
P36953	P36953	AFAM_RAT	Afm	Afamin	1	ADWCQPLKEDLQNKR	ADWC(UniMod:4)QPLKEDLQNKR	3	ADWC(UniMod:4)QPLKEDLQNKR3	12049.8	18903.8	20499.8
P36953	P36953	AFAM_RAT	Afm	Afamin	1	ADWCQPLKEDLQNKR	ADWC(UniMod:4)QPLKEDLQNKR	4	ADWC(UniMod:4)QPLKEDLQNKR4	29346.4	30093	31011.2
F7EXP7	F7EXP7	F7EXP7_RAT	Snx7	Sorting nexin 7	1	ADWERWR	ADWERWR	2	ADWERWR2		20652.6	
Q63448	Q63448	ACOX3_RAT	Acox3	Peroxisomal acyl-coenzyme A oxidase 3	1	ADWLDSEAPLAAYR	ADWLDSEAPLAAYR	2	ADWLDSEAPLAAYR2	18167.3	22819.9	15056.4
Q3B8P0	Q3B8P0	PARL_RAT	Parl	Presenilin-associated rhomboid-like protein, mitochondrial	1	ADWLDSIRPQK	ADWLDSIRPQK	3	ADWLDSIRPQK3	21060.7	17539.1	14126.5
Q6AY17	Q6AY17	AB17B_RAT	Abhd17b	Alpha/beta hydrolase domain-containing protein 17B	1	ADWQYSSR	ADWQYSSR	2	ADWQYSSR2	49169.4	28770.3	42126.8
P10888	P10888	COX41_RAT	Cox4i1	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial	1	ADWSSLSR	ADWSSLSR	2	ADWSSLSR2	726729	624195	739691
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	ADYAQLLEDMQNAFR	ADYAQLLEDMQNAFR	2	ADYAQLLEDMQNAFR2	9966.2	12052.3	6754.21
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	ADYAQLLEDMQNAFR	ADYAQLLEDMQNAFR	3	ADYAQLLEDMQNAFR3	5488.6		4830.32
F1LTN6	P01835;F1LTN6	F1LTN6_RAT	AABR07060872.1	Ig-like domain-containing protein	0	ADYESHNLYTCEVVHK	ADYESHNLYTC(UniMod:4)EVVHK	3	ADYESHNLYTC(UniMod:4)EVVHK3	471945	379560	418895
F1LTN6	P01835;F1LTN6	F1LTN6_RAT	AABR07060872.1	Ig-like domain-containing protein	0	ADYESHNLYTCEVVHK	ADYESHNLYTC(UniMod:4)EVVHK	4	ADYESHNLYTC(UniMod:4)EVVHK4	30137.9	7.39024e+06	33674.2
F1LTN6	P01835;F1LTN6	F1LTN6_RAT	AABR07060872.1	Ig-like domain-containing protein	0	ADYESHNLYTCEVVHKTSSSPVVK	ADYESHNLYTC(UniMod:4)EVVHKTSSSPVVK	4	ADYESHNLYTC(UniMod:4)EVVHKTSSSPVVK4	10754.1	8267.6	11165.5
B5DEH0	B5DEH0	LIMD1_RAT	Limd1	LIM domain-containing protein 1	1	ADYFGACVK	ADYFGAC(UniMod:4)VK	2	ADYFGAC(UniMod:4)VK2	11279.9	10960.2	16045.2
D4A2W1	D4A2W1	D4A2W1_RAT	Enpp4	Ectonucleotide pyrophosphatase/phosphodiesterase 4	1	ADYLNNYDLPHLQNFIK	ADYLNNYDLPHLQNFIK	3	ADYLNNYDLPHLQNFIK3	46178.4	49403.5	40534.4
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	ADYLNPLFR	ADYLNPLFR	2	ADYLNPLFR2	173074	193251	148848
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	ADYNLTR	ADYNLTR	2	ADYNLTR2	83470	92329.9	94009.7
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	ADYQTVDDEIEANIEEIEANEEDIGDGFRR	ADYQTVDDEIEANIEEIEANEEDIGDGFRR	4	ADYQTVDDEIEANIEEIEANEEDIGDGFRR4	5409.37	44899.8	17556.6
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	ADYSLILQR	ADYSLILQR	2	ADYSLILQR2	45069.1	55443.9	61138
Q68FS6	Q68FS6	PYRD1_RAT	Pyroxd1	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1	1	ADYVGSALGPDWHGGLALK	ADYVGSALGPDWHGGLALK	3	ADYVGSALGPDWHGGLALK3	3943.24		2241.36
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	ADYVSLEEHSR	ADYVSLEEHSR	2	ADYVSLEEHSR2	9020.27	4576.26	11925.8
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	ADYVSLEEHSR	ADYVSLEEHSR	3	ADYVSLEEHSR3	76994.4	47313.2	50850.5
Q8CIZ5	F1LVL9;Q8CIZ5	DMBT1_RAT	Dmbt1	Deleted in malignant brain tumors 1 protein	0	ADYYSDFDNNTTNLLCLSNHMR	ADYYSDFDNNTTNLLC(UniMod:4)LSNHMR	3	ADYYSDFDNNTTNLLC(UniMod:4)LSNHMR3	20289.3	44836.2	25996.8
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	AEAAAPYTVLAQSAPR	AEAAAPYTVLAQSAPR	2	AEAAAPYTVLAQSAPR2	58590.1	69191.6	41413.3
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	AEAAAPYTVLAQSAPR	AEAAAPYTVLAQSAPR	3	AEAAAPYTVLAQSAPR3	16960.6	16290	14477.9
Q6AXX6	Q6AXX6	PXL2A_RAT	Prxl2a	Peroxiredoxin-like 2A	1	AEAADLMSLKPK	AEAADLMSLKPK	2	AEAADLMSLKPK2	15360.5	7170.92	12802.7
Q6AXX6	Q6AXX6	PXL2A_RAT	Prxl2a	Peroxiredoxin-like 2A	1	AEAADLMSLKPK	AEAADLMSLKPK	3	AEAADLMSLKPK3	101798	80902.2	79467.4
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	AEAAFVLHVTDVNDNAPAFDR	AEAAFVLHVTDVNDNAPAFDR	3	AEAAFVLHVTDVNDNAPAFDR3	12798.1		9283.45
Q5FVN1	Q5FVN1	STBD1_RAT	Stbd1	Starch-binding domain-containing protein 1	1	AEAASLAQSAGHEDWEVVSR	AEAASLAQSAGHEDWEVVSR	3	AEAASLAQSAGHEDWEVVSR3	22197.6	20931.6	32470.3
Q4V8B2	Q4V8B2	DCNL3_RAT	Dcun1d3	DCN1-like protein 3	1	AEAATEACQLPTSSGDAGR	AEAATEAC(UniMod:4)QLPTSSGDAGR	2	AEAATEAC(UniMod:4)QLPTSSGDAGR2	1401.21		
Q4V8B2	Q4V8B2	DCNL3_RAT	Dcun1d3	DCN1-like protein 3	1	AEAATEACQLPTSSGDAGR	AEAATEAC(UniMod:4)QLPTSSGDAGR	3	AEAATEAC(UniMod:4)QLPTSSGDAGR3	2785.63	3023.48	
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	AEAAVELR	AEAAVELR	2	AEAAVELR2	223245	300167	321062
Q9WVA1	F1M556;Q9WVA1	TIM8A_RAT	Timm8a	Mitochondrial import inner membrane translocase subunit Tim8 A	0	AEACFVNCVER	AEAC(UniMod:4)FVNC(UniMod:4)VER	2	AEAC(UniMod:4)FVNC(UniMod:4)VER2	17642	23147	21936.3
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	AEACGTLCR	AEAC(UniMod:4)GTLC(UniMod:4)R	2	AEAC(UniMod:4)GTLC(UniMod:4)R2	28916.2	22179.1	20945.2
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	AEADSTSVRPEDATER	AEADSTSVRPEDATER	2	AEADSTSVRPEDATER2	22577.8	19275.7	16873.6
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	AEADSTSVRPEDATER	AEADSTSVRPEDATER	3	AEADSTSVRPEDATER3	746325	842991	905963
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	AEADVHIK	AEADVHIK	2	AEADVHIK2	6233.39	15801.4	
A0A0G2K7G2	A0A0G2K7G2	A0A0G2K7G2_RAT	Agfg2	ArfGAP with FG repeats 2	1	AEAEAASEVWCR	AEAEAASEVWC(UniMod:4)R	2	AEAEAASEVWC(UniMod:4)R2	3478.23	3369.65	1607.32
D4A249	D4A249	D4A249_RAT	Mblac2	Metallo-beta-lactamase domain containing 2	1	AEAEALAR	AEAEALAR	2	AEAEALAR2	7771.32	6434.74	16085.4
D3ZXB7	Q6IFZ5;D3ZXB7	D3ZXB7_RAT	Krt71	Keratin 71	0	AEAEALYQTK	AEAEALYQTK	2	AEAEALYQTK2	21987.6	23457.7	10430.1
P52873	P52873	PYC_RAT	Pc	Pyruvate carboxylase, mitochondrial	1	AEAEAQAEELSFPR	AEAEAQAEELSFPR	3	AEAEAQAEELSFPR3	2635.04		
G3V6R9	G3V6R9	G3V6R9_RAT	Bloc1s4	Biogenesis of lysosomal organelles complex 1 subunit 4	1	AEAELGTFPR	AEAELGTFPR	2	AEAELGTFPR2	5515.23	11595.5	12081
P30427	P30427	PLEC_RAT	Plec	Plectin	1	AEAELLQQQK	AEAELLQQQK	2	AEAELLQQQK2	3862.25	2598.09	3643.51
A0A0G2K652	A0A0G2K652	A0A0G2K652_RAT	Cul9	Cullin 9	1	AEAEPAGAKPESPK	AEAEPAGAKPESPK	2	AEAEPAGAKPESPK2	1832.54		
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	AEAEQSILYAHCR	AEAEQSILYAHC(UniMod:4)R	2	AEAEQSILYAHC(UniMod:4)R2	1426.45		1084.14
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	AEAEQSILYAHCR	AEAEQSILYAHC(UniMod:4)R	3	AEAEQSILYAHC(UniMod:4)R3	24868.5	24140.5	25693.6
Q6IG05	A0A8I5ZR22;A0A0G2JVA8;A0A8I5ZMI8;A0A0G2JUG1;A0A8I6G380;Q4FZU2;Q6IG05;A0A8I6AP90	K2C75_RAT	Krt75	Keratin, type II cytoskeletal 75	0	AEAESWYQTK	AEAESWYQTK	2	AEAESWYQTK2	49861.9	35199.1	28493.7
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	AEAGDNLGALVR	AEAGDNLGALVR	2	AEAGDNLGALVR2	135312	152646	137205
Q8R478	Q8R478	WBP2_RAT	Wbp2	WW domain-binding protein 2	1	AEAGGGWEGSASYK	AEAGGGWEGSASYK	2	AEAGGGWEGSASYK2	4724.58	2304.97	3169.66
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	AEAGGLKEQELSWGLHQIVK	AEAGGLKEQELSWGLHQIVK	3	AEAGGLKEQELSWGLHQIVK3		4213.17	9625.59
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	AEAGGLKEQELSWGLHQIVK	AEAGGLKEQELSWGLHQIVK	4	AEAGGLKEQELSWGLHQIVK4	4821.7	6625.45	4121.24
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AEAGVPAEFGIWTR	AEAGVPAEFGIWTR	2	AEAGVPAEFGIWTR2	7.04686e+06	7.61656e+06	7.64493e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AEAGVPAEFGIWTR	AEAGVPAEFGIWTR	3	AEAGVPAEFGIWTR3	244401	221696	268058
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	AEAGVSSPVTR	AEAGVSSPVTR	2	AEAGVSSPVTR2	107169	113857	97014.3
O35314	O35314	SCG1_RAT	Chgb	Secretogranin-1	1	AEAHFVELEK	AEAHFVELEK	2	AEAHFVELEK2	4794.99		
O35314	O35314	SCG1_RAT	Chgb	Secretogranin-1	1	AEAHFVELEK	AEAHFVELEK	3	AEAHFVELEK3	19553.3	20309.6	37161.6
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	AEAISALSK	AEAISALSK	2	AEAISALSK2	20436.1	21609.3	29402.3
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	AEAISLQMAQCK	AEAISLQMAQC(UniMod:4)K	2	AEAISLQMAQC(UniMod:4)K2	68383.8	71208.4	66286.6
D3ZUL1	D3ZUL1	D3ZUL1_RAT	Ccdc124	Coiled-coil domain containing 124	1	AEAKAAADAK	AEAKAAADAK	1	AEAKAAADAK1	16838.3		5499.88
F1MAG1	F1MAG1	F1MAG1_RAT	Agrp	Agouti related neuropeptide	1	AEALAEVLDPQNR	AEALAEVLDPQNR	2	AEALAEVLDPQNR2		5219.88	9390.47
B0BN83	B0BN83	B0BN83_RAT	Armc1	Armadillo repeat-containing protein 1	1	AEALASAIASTK	AEALASAIASTK	2	AEALASAIASTK2	20153	14434.2	
A1L1K3	A1L1K3	APC5_RAT	Anapc5	Anaphase-promoting complex subunit 5	1	AEALEAAIQNLTEAK	AEALEAAIQNLTEAK	2	AEALEAAIQNLTEAK2		3768	3274.65
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	AEALIQLLDVNDNDPVVK	AEALIQLLDVNDNDPVVK	3	AEALIQLLDVNDNDPVVK3	5777.31	8703.34	3626.49
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	AEALPLQK	AEALPLQK	1	AEALPLQK1	25047.2	21739.9	14382
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	AEALPLQK	AEALPLQK	2	AEALPLQK2	1.07101e+06	858545	1.09426e+06
Q499T5	Q499T5	Q499T5_RAT	Capn7	Calpain 7	1	AEALSEPLTKPFCK	AEALSEPLTKPFC(UniMod:4)K	3	AEALSEPLTKPFC(UniMod:4)K3	11751.3	16249.7	7662.38
Q7TNZ9	Q7TNZ9	Q7TNZ9_RAT	Cmtm6	CKLF-like MARVEL transmembrane domain containing 6	1	AEALTEPLNA	AEALTEPLNA	2	AEALTEPLNA2	124759	118491	141148
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	AEAMEILLSR	AEAMEILLSR	2	AEAMEILLSR2	57251.4	57339.3	57603.2
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	AEAMSGHIDQFLIATFMQLR	AEAMSGHIDQFLIATFMQLR	3	AEAMSGHIDQFLIATFMQLR3	2468	1806.44	
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	AEAPEGQGQGPQAAR	AEAPEGQGQGPQAAR	2	AEAPEGQGQGPQAAR2	30008.2	23533.2	24431.1
A0A8I6AI88	A0A0G2K1G6;A0A8I6AI88	A0A8I6AI88_RAT	Chpf2	Hexosyltransferase	0	AEAPSQVR	AEAPSQVR	2	AEAPSQVR2	10951.3	12761.4	11221.6
P00507	P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	1	AEAQIAGK	AEAQIAGK	1	AEAQIAGK1	14485.4	4510.34	3035.07
P00507	P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	1	AEAQIAGK	AEAQIAGK	2	AEAQIAGK2	304008	132719	86795
Q63692	Q63692	CDC37_RAT	Cdc37	Hsp90 co-chaperone Cdc37	1	AEAQQLR	AEAQQLR	2	AEAQQLR2	143599	208148	274890
Q68FW7	Q68FW7	SYTM_RAT	Tars2	Threonine--tRNA ligase, mitochondrial	1	AEASGSLGGLTR	AEASGSLGGLTR	2	AEASGSLGGLTR2	6751.84	4191.4	8660.72
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	AEASLLLLPEAAAERDAREK	AEASLLLLPEAAAERDAREK	3	AEASLLLLPEAAAERDAREK3		2415.48	
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AEASQLGHK	AEASQLGHK	1	AEASQLGHK1			10310
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AEASQLGHK	AEASQLGHK	2	AEASQLGHK2			760480
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	AEASWDSAVHNCPQLSK	AEASWDSAVHNC(UniMod:4)PQLSK	3	AEASWDSAVHNC(UniMod:4)PQLSK3	32085.4	31651.1	31576.5
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	AEAVAAVQR	AEAVAAVQR	2	AEAVAAVQR2	148143	148599	134947
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	AEAVHDALESLESVLR	AEAVHDALESLESVLR	3	AEAVHDALESLESVLR3	69403.8	56740.6	62001.5
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	AEAVPEEEASSSVATLER	AEAVPEEEASSSVATLER	2	AEAVPEEEASSSVATLER2	36098.7	27376.2	38663
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	AEAVPEEEASSSVATLER	AEAVPEEEASSSVATLER	3	AEAVPEEEASSSVATLER3	17546.2	20733.4	20559.6
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	AEAVVAVLLTK	AEAVVAVLLTK	2	AEAVVAVLLTK2	29332.2	34773	20238.1
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	AECGTTRPPCLPPKPQK	AEC(UniMod:4)GTTRPPC(UniMod:4)LPPKPQK	4	AEC(UniMod:4)GTTRPPC(UniMod:4)LPPKPQK4	16997.3	14846.4	18940.6
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	AECLEDLVSFIIEEPPQDMDEK	AEC(UniMod:4)LEDLVSFIIEEPPQDMDEK	3	AEC(UniMod:4)LEDLVSFIIEEPPQDMDEK3	19084.7	9464.26	10853.7
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	AECLEELGCLIESYGMNVCQPTPGK	AEC(UniMod:4)LEELGC(UniMod:4)LIESYGMNVC(UniMod:4)QPTPGK	3	AEC(UniMod:4)LEELGC(UniMod:4)LIESYGMNVC(UniMod:4)QPTPGK3	11312	5710.29	4987.35
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	AECMLQQAER	AEC(UniMod:4)MLQQAER	2	AEC(UniMod:4)MLQQAER2	53852.9	57762.5	42321.5
B2GV97	B2GV97	B2GV97_RAT	Sepsecs	O-phosphoseryl-tRNA(Sec) selenium transferase	1	AEDADVEEMALK	AEDADVEEMALK	2	AEDADVEEMALK2	5602.32	7388.43	6215.39
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	AEDAIIALSNYR	AEDAIIALSNYR	2	AEDAIIALSNYR2	13714.6	11016.9	5256.97
P70583	P70583	DUT_RAT	Dut	Deoxyuridine 5'-triphosphate nucleotidohydrolase	1	AEDDASLR	AEDDASLR	2	AEDDASLR2	12858.6	14171.3	16807.3
Q6MG21	Q6MG21	SYVM_RAT	Vars2	Valine--tRNA ligase, mitochondrial	1	AEDDREECWVVGR	AEDDREEC(UniMod:4)WVVGR	3	AEDDREEC(UniMod:4)WVVGR3	2835.72	4664.71	5509.84
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	AEDEEELQR	AEDEEELQR	2	AEDEEELQR2	575678	641383	608027
Q9R1Z0	Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	1	AEDFQLHTHVNDGTEFGGSIYQR	AEDFQLHTHVNDGTEFGGSIYQR	3	AEDFQLHTHVNDGTEFGGSIYQR3	20617.7	14798.2	17004.4
Q9R1Z0	Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	1	AEDFQLHTHVNDGTEFGGSIYQR	AEDFQLHTHVNDGTEFGGSIYQR	4	AEDFQLHTHVNDGTEFGGSIYQR4	413281	431284	464153
G3V829	G3V829	G3V829_RAT	Fubp3	Far upstream element binding protein 3	1	AEDFVDALHR	AEDFVDALHR	3	AEDFVDALHR3	2995.41	3047.7	2121.41
P30009	P30009	MARCS_RAT	Marcks	Myristoylated alanine-rich C-kinase substrate	1	AEDGAAPSPSSETPK	AEDGAAPSPSSETPK	2	AEDGAAPSPSSETPK2	38542.2	32534.3	31522.3
P30009	P30009	MARCS_RAT	Marcks	Myristoylated alanine-rich C-kinase substrate	1	AEDGAAPSPSSETPKK	AEDGAAPSPSSETPKK	3	AEDGAAPSPSSETPKK3	3360.25	5296.26	4007.45
Q6PEC1	F1M825;Q6PEC1	TBCA_RAT	Tbca	Tubulin-specific chaperone A	0	AEDGENYAIK	AEDGENYAIK	2	AEDGENYAIK2	42068.5	32086.4	31579.1
Q6PEC1	F1M825;Q6PEC1	TBCA_RAT	Tbca	Tubulin-specific chaperone A	0	AEDGENYAIKK	AEDGENYAIKK	3	AEDGENYAIKK3	6640.82	3208.66	
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	AEDGNEDSEEEVK	AEDGNEDSEEEVK	2	AEDGNEDSEEEVK2	1654.66		2629.65
Q02445	Q02445	TFPI1_RAT	Tfpi	Tissue factor pathway inhibitor	1	AEDGPCK	AEDGPC(UniMod:4)K	1	AEDGPC(UniMod:4)K1			10766.1
Q07936	Q07936	ANXA2_RAT	Anxa2	Annexin A2	1	AEDGSVIDYELIDQDAR	AEDGSVIDYELIDQDAR	2	AEDGSVIDYELIDQDAR2	1916.83		3490.04
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	AEDITHNGIVYTPK	AEDITHNGIVYTPK	2	AEDITHNGIVYTPK2	784880	661521	549861
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	AEDITHNGIVYTPK	AEDITHNGIVYTPK	3	AEDITHNGIVYTPK3	1.0409e+07	9.70012e+06	9.2525e+06
P27952	A0A0G2K8H4;A0A0U1RVI9;P27952;A0A8I6A7W0;D3ZQW7	RS2_RAT	Rps2	Small ribosomal subunit protein uS5	0	AEDKEWIPVTK	AEDKEWIPVTK	2	AEDKEWIPVTK2	4253.57	3469.66	463.924
P27952	A0A0G2K8H4;A0A0U1RVI9;P27952;A0A8I6A7W0;D3ZQW7	RS2_RAT	Rps2	Small ribosomal subunit protein uS5	0	AEDKEWIPVTK	AEDKEWIPVTK	3	AEDKEWIPVTK3	88589.1	107719	100044
D3ZTX0	D3ZTX0	TMED7_RAT	Tmed7	Transmembrane emp24 domain-containing protein 7	1	AEDLNTR	AEDLNTR	2	AEDLNTR2	92483.7	70310.6	60858.6
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	AEDQELESLSAIEAELEK	AEDQELESLSAIEAELEK	3	AEDQELESLSAIEAELEK3	25154	28832.5	18965.8
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	AEDSDAIPEWK	AEDSDAIPEWK	2	AEDSDAIPEWK2	14985.3	15997.2	7044.88
Q6AY72	Q6AY72	CS025_RAT		UPF0449 protein C19orf25 homolog	1	AEDSEVQQEQIYQQSR	AEDSEVQQEQIYQQSR	2	AEDSEVQQEQIYQQSR2	4709.74	4194.97	4287.76
Q6AY72	Q6AY72	CS025_RAT		UPF0449 protein C19orf25 homolog	1	AEDSEVQQEQIYQQSR	AEDSEVQQEQIYQQSR	3	AEDSEVQQEQIYQQSR3	3867.99	3611.6	6162.03
P97546	P97546	NPTN_RAT	Nptn	Neuroplastin	1	AEDSGEYHCVYHFVSAPK	AEDSGEYHC(UniMod:4)VYHFVSAPK	3	AEDSGEYHC(UniMod:4)VYHFVSAPK3	8447.56		3755.63
P97546	P97546	NPTN_RAT	Nptn	Neuroplastin	1	AEDSGEYHCVYHFVSAPK	AEDSGEYHC(UniMod:4)VYHFVSAPK	4	AEDSGEYHC(UniMod:4)VYHFVSAPK4	9269.06	8233.71	13227.1
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	AEDSSVEQLSTEIEPSREESWVSIK	AEDSSVEQLSTEIEPSREESWVSIK	3	AEDSSVEQLSTEIEPSREESWVSIK3	8027.09	6543.1	5661.74
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	AEDSVLLK	AEDSVLLK	2	AEDSVLLK2		32252.8	31086.4
F1LWD0	F1LWD0	F1LWD0_RAT	AABR07065782.1	Ig-like domain-containing protein	1	AEDTAIYYCAK	AEDTAIYYC(UniMod:4)AK	2	AEDTAIYYC(UniMod:4)AK2	102308	138002	120328
A0A0G2K828	A0A0G2K828	A0A0G2K828_RAT	ENSRNOG00000066380	Ig-like domain-containing protein	1	AEDTATYYCAR	AEDTATYYC(UniMod:4)AR	2	AEDTATYYC(UniMod:4)AR2	157892	142806	162894
A0A0G2K828	A0A0G2K828	A0A0G2K828_RAT	ENSRNOG00000066380	Ig-like domain-containing protein	1	AEDTATYYCAR	AEDTATYYC(UniMod:4)AR	3	AEDTATYYC(UniMod:4)AR3	2331.17	5387.65	4836.22
Q64350	Q64350	EI2BE_RAT	Eif2b5	Translation initiation factor eIF-2B subunit epsilon	1	AEDVDEKEDEELR	AEDVDEKEDEELR	3	AEDVDEKEDEELR3	23153.8	16437.6	23731.9
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	AEDWEIK	AEDWEIK	2	AEDWEIK2	16071.7	7653.39	16293.3
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	AEDYDVVK	AEDYDVVK	1	AEDYDVVK1			1621.44
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	AEDYDVVK	AEDYDVVK	2	AEDYDVVK2	189158	178360	189926
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	AEDYEVVK	AEDYEVVK	2	AEDYEVVK2	28609.9	32930.9	37154.7
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	AEDYLEK	AEDYLEK	2	AEDYLEK2	14090.2	17034.2	18765.5
D3ZUY0	D3ZUY0	D3ZUY0_RAT	Rdh14	Retinol dehydrogenase 14	1	AEEAAGQLR	AEEAAGQLR	2	AEEAAGQLR2	12366.8	8397.46	7974.09
P58405	P58405	STRN3_RAT	Strn3	Striatin-3	1	AEEAEPITFPSGGGK	AEEAEPITFPSGGGK	2	AEEAEPITFPSGGGK2	11008.7	11000	9938.71
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	AEEAGHWLWSR	AEEAGHWLWSR	3	AEEAGHWLWSR3	95458.9	78847.2	107254
D3ZAQ0	D3ZAQ0	D3ZAQ0_RAT	Fundc2	FUN14 domain containing 2	1	AEEALSFVK	AEEALSFVK	2	AEEALSFVK2	58305.8	51710.3	50213.9
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	AEEAMATYR	AEEAMATYR	2	AEEAMATYR2	1.14462e+06	1.30347e+06	1.38044e+06
Q9JMB3	Q9JMB3	Q9JMB3_RAT	Epb41l3	Erythrocyte membrane protein band 4.1-like 3	1	AEEATPVAALR	AEEATPVAALR	2	AEEATPVAALR2	11267.9	16259.9	7156.08
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	AEECYYDETVASR	AEEC(UniMod:4)YYDETVASR	2	AEEC(UniMod:4)YYDETVASR2	13995.8	17119.4	21256.4
P35565	P35565	CALX_RAT	Canx	Calnexin	1	AEEDEILNR	AEEDEILNR	2	AEEDEILNR2	1.32294e+06	1.21415e+06	1.51381e+06
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	AEEDFSK	AEEDFSK	1	AEEDFSK1	156801	133684	153590
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	AEEDFSK	AEEDFSK	2	AEEDFSK2	8.69565e+06	8.4883e+06	9.95729e+06
P36860	P36860	RALB_RAT	Ralb	Ras-related protein Ral-B	1	AEEDKIPLLVVGNK	AEEDKIPLLVVGNK	2	AEEDKIPLLVVGNK2	26763.8	33317.1	33701.7
P36860	P36860	RALB_RAT	Ralb	Ras-related protein Ral-B	1	AEEDKIPLLVVGNK	AEEDKIPLLVVGNK	3	AEEDKIPLLVVGNK3	256779	202630	224276
Q03344	A0A8I6AC26;Q03344	ATIF1_RAT	Atp5if1	ATPase inhibitor, mitochondrial	0	AEEDRYFR	AEEDRYFR	2	AEEDRYFR2	11066.9	22334.6	20653.9
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	AEEDTDPNSVHSVPR	AEEDTDPNSVHSVPR	2	AEEDTDPNSVHSVPR2	9132.38	4193.1	8627.8
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	AEEDTDPNSVHSVPR	AEEDTDPNSVHSVPR	3	AEEDTDPNSVHSVPR3	253722	258392	249815
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	AEEDVEPECIMEK	AEEDVEPEC(UniMod:4)IMEK	2	AEEDVEPEC(UniMod:4)IMEK2	190254	173850	176249
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	AEEDVEPECIMEK	AEEDVEPEC(UniMod:4)IMEK	3	AEEDVEPEC(UniMod:4)IMEK3	18674.1	18180.3	20371.1
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	AEEEAYNK	AEEEAYNK	1	AEEEAYNK1			3779.03
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	AEEEAYNK	AEEEAYNK	2	AEEEAYNK2			8026.25
O35806	O35806	LTBP2_RAT	Ltbp2	Latent-transforming growth factor beta-binding protein 2	1	AEEEELASPVR	AEEEELASPVR	2	AEEEELASPVR2	12659.8	15023	12253.4
Q6PCU2	D3ZJ78;Q6PCU2	VATE1_RAT	Atp6v1e1	V-type proton ATPase subunit E 1	0	AEEEFNIEK	AEEEFNIEK	2	AEEEFNIEK2	33470.2	33576.1	34433.1
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	AEEEGGSDGSAAEAEPR	AEEEGGSDGSAAEAEPR	2	AEEEGGSDGSAAEAEPR2	45002.6	36659.9	6147.3
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	AEEEGGSDGSAAEAEPR	AEEEGGSDGSAAEAEPR	3	AEEEGGSDGSAAEAEPR3		4754.95	
Q9JMB3	Q9JMB3	Q9JMB3_RAT	Epb41l3	Erythrocyte membrane protein band 4.1-like 3	1	AEEEHVEEEDRR	AEEEHVEEEDRR	3	AEEEHVEEEDRR3			5308.33
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	AEEELSVDSVLEPEQEK	AEEELSVDSVLEPEQEK	2	AEEELSVDSVLEPEQEK2	2443.57	8531.08	2018.48
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	AEEEQQGTGPGAGTAASK	AEEEQQGTGPGAGTAASK	2	AEEEQQGTGPGAGTAASK2	89024.4		121287
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	AEEEQQGTGPGAGTAASK	AEEEQQGTGPGAGTAASK	3	AEEEQQGTGPGAGTAASK3	3931		4637.77
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	AEEFDQIK	AEEFDQIK	2	AEEFDQIK2	26984.4	27537.1	22002.9
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	AEEGVYQCIAVSR	AEEGVYQC(UniMod:4)IAVSR	2	AEEGVYQC(UniMod:4)IAVSR2	1315.14	2470.18	
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	AEEIDVAK	AEEIDVAK	2	AEEIDVAK2	8088.56	11512.2	8075.89
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	AEEIESR	AEEIESR	2	AEEIESR2	30711.2	32180.2	28889.3
Q5FVQ9	Q5FVQ9	TBCE_RAT	Tbce	Tubulin-specific chaperone E	1	AEEIIIAK	AEEIIIAK	2	AEEIIIAK2	14477.3	14559.8	10835.9
P62914	P62914	RL11_RAT	Rpl11	Large ribosomal subunit protein uL5	1	AEEILEK	AEEILEK	2	AEEILEK2	8684.21	6457.11	5846.14
M0RCS2	M0RCS2	M0RCS2_RAT	Tbl2	Transducin (beta)-like 2	1	AEEKPSQPICQK	AEEKPSQPIC(UniMod:4)QK	2	AEEKPSQPIC(UniMod:4)QK2	2790.29	4816.12	
M0RCS2	M0RCS2	M0RCS2_RAT	Tbl2	Transducin (beta)-like 2	1	AEEKPSQPICQK	AEEKPSQPIC(UniMod:4)QK	3	AEEKPSQPIC(UniMod:4)QK3	9849.63	7263.47	
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	AEEKPVDVSAMPR	AEEKPVDVSAMPR	2	AEEKPVDVSAMPR2	5386.95	5872.36	6764.12
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	AEEKPVDVSAMPR	AEEKPVDVSAMPR	3	AEEKPVDVSAMPR3	100754	75904.4	91768.7
Q9WVE9	A0A8I6ASA9;Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	0	AEELCSQVNEGVR	AEELC(UniMod:4)SQVNEGVR	2	AEELC(UniMod:4)SQVNEGVR2	1247.97	4373.63	
A0A8J8YHW4	A0A8J8YHW4	A0A8J8YHW4_RAT	Clk2	Secretory carrier-associated membrane protein	1	AEELDRR	AEELDRR	2	AEELDRR2			23530.2
G3V6U9	G3V6U9	SETD3_RAT	Setd3	Actin-histidine N-methyltransferase	1	AEELFLWVPR	AEELFLWVPR	2	AEELFLWVPR2	18025.1	20366.8	14369.9
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	AEELFMEFAHK	AEELFMEFAHK	3	AEELFMEFAHK3	13290.2	78140.3	17293.9
P21775	P07871;P21775	THIKA_RAT	Acaa1a	3-ketoacyl-CoA thiolase A, peroxisomal	0	AEELGLPILGVLR	AEELGLPILGVLR	2	AEELGLPILGVLR2	45072.8	37211.4	49335
Q62703	Q62703	RCN2_RAT	Rcn2	Reticulocalbin-2	1	AEELHYPQGEHR	AEELHYPQGEHR	2	AEELHYPQGEHR2		3486.46	4108.81
Q62703	Q62703	RCN2_RAT	Rcn2	Reticulocalbin-2	1	AEELHYPQGEHR	AEELHYPQGEHR	3	AEELHYPQGEHR3	8736	7279.33	13365.3
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	AEELIQEIQR	AEELIQEIQR	2	AEELIQEIQR2	66820.6	87768.7	80920.8
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	AEELLAEEK	AEELLAEEK	2	AEELLAEEK2	34678.5	33911.8	41606.3
Q66H59	Q66H59	NPL_RAT	Npl	N-acetylneuraminate lyase	1	AEELLDGIQDK	AEELLDGIQDK	2	AEELLDGIQDK2	18925.4	18062.1	11606.7
Q66H59	Q66H59	NPL_RAT	Npl	N-acetylneuraminate lyase	1	AEELLDGIQDKIPSFQGLK	AEELLDGIQDKIPSFQGLK	3	AEELLDGIQDKIPSFQGLK3	11805	15643	12222.7
D3ZMV1	D3ZMV1	D3ZMV1_RAT	Sla2	Src-like-adaptor 2	1	AEELLLLPGNPGGAFLIR	AEELLLLPGNPGGAFLIR	2	AEELLLLPGNPGGAFLIR2	19957.5	24404.8	17698.2
D3ZMV1	D3ZMV1	D3ZMV1_RAT	Sla2	Src-like-adaptor 2	1	AEELLLLPGNPGGAFLIR	AEELLLLPGNPGGAFLIR	3	AEELLLLPGNPGGAFLIR3	6035.09	11463.7	6853.84
P59622	P59622	SLAP1_RAT	Sla	Src-like-adapter	1	AEELLQLPDTK	AEELLQLPDTK	2	AEELLQLPDTK2	16353.3	12034.9	17498.3
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	AEELLSR	AEELLSR	2	AEELLSR2	94568.9	85443.8	109594
Q66H15	Q66H15	RMD3_RAT	Rmdn3	Regulator of microtubule dynamics protein 3	1	AEELQPGFSK	AEELQPGFSK	2	AEELQPGFSK2	79553.9	58705.7	65425.5
P53817	P53817	PLAT3_RAT	Plaat3	Phospholipase A and acyltransferase 3	1	AEELVGQEVLYR	AEELVGQEVLYR	2	AEELVGQEVLYR2	6519.76		2441.55
Q62921	Q62921	HOIL1_RAT	Rbck1	RanBP-type and C3HC4-type zinc finger-containing protein 1	1	AEEMALSLAR	AEEMALSLAR	2	AEEMALSLAR2	4483.49	6880.79	6362.56
P62994	P62994	GRB2_RAT	Grb2	Growth factor receptor-bound protein 2	1	AEEMLSK	AEEMLSK	1	AEEMLSK1	3161.02	1545.62	1254.74
P62994	P62994	GRB2_RAT	Grb2	Growth factor receptor-bound protein 2	1	AEEMLSK	AEEMLSK	2	AEEMLSK2	108691	119715	116977
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	AEENLLLVLGSDMSDRR	AEENLLLVLGSDMSDRR	3	AEENLLLVLGSDMSDRR3	15289.2	19909.1	15295.9
P30009	P30009	MARCS_RAT	Marcks	Myristoylated alanine-rich C-kinase substrate	1	AEEPSEAVGEK	AEEPSEAVGEK	2	AEEPSEAVGEK2	102434	108958	102905
O35796	O35796	C1QBP_RAT	C1qbp	Complement component 1 Q subcomponent-binding protein, mitochondrial	1	AEEQEPELTSTPNFVVEVTK	AEEQEPELTSTPNFVVEVTK	3	AEEQEPELTSTPNFVVEVTK3	61026.2	48045.4	62341.8
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	AEEQMLK	AEEQMLK	2	AEEQMLK2	24999.7	23425.5	22700.7
Q66HA4	Q66HA4	TAXB1_RAT	Tax1bp1	Tax1-binding protein 1 homolog	1	AEEQVQATR	AEEQVQATR	2	AEEQVQATR2			3430.23
P04692	P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	1	AEERAELSEGK	AEERAELSEGK	3	AEERAELSEGK3	15618.5	17468.4	
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	AEERAEVSELK	AEERAEVSELK	2	AEERAEVSELK2	47848.3	47979.1	56614.9
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	AEERAEVSELK	AEERAEVSELK	3	AEERAEVSELK3	758830	1.1594e+06	1.4783e+06
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	AEESTAIIAVVQK	AEESTAIIAVVQK	2	AEESTAIIAVVQK2	57929.4	54553.2	48362.6
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	AEESTAIIAVVQK	AEESTAIIAVVQK	3	AEESTAIIAVVQK3	43974.5	45712	55073.5
Q4G069	Q4G069	RMD1_RAT	Rmdn1	Regulator of microtubule dynamics protein 1	1	AEEVDPNFYSK	AEEVDPNFYSK	2	AEEVDPNFYSK2	27347.6	27320.5	36568.4
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	AEEVYAQLQK	AEEVYAQLQK	2	AEEVYAQLQK2	31219.2	36366.8	35653.2
P36860	P36860	RALB_RAT	Ralb	Ras-related protein Ral-B	1	AEEWGVQYVETSAK	AEEWGVQYVETSAK	2	AEEWGVQYVETSAK2	135596	131866	170752
P36860	P36860	RALB_RAT	Ralb	Ras-related protein Ral-B	1	AEEWGVQYVETSAK	AEEWGVQYVETSAK	3	AEEWGVQYVETSAK3	21806	19694.6	19815.4
Q5XI73	Q5XI73	GDIR1_RAT	Arhgdia	Rho GDP-dissociation inhibitor 1	1	AEEYEFLTPMEEAPK	AEEYEFLTPMEEAPK	2	AEEYEFLTPMEEAPK2	127285	133609	168770
Q5XI73	Q5XI73	GDIR1_RAT	Arhgdia	Rho GDP-dissociation inhibitor 1	1	AEEYEFLTPMEEAPK	AEEYEFLTPMEEAPK	3	AEEYEFLTPMEEAPK3	52034.2	43450.9	55978.6
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	AEEYVLGDFCFLR	AEEYVLGDFC(UniMod:4)FLR	2	AEEYVLGDFC(UniMod:4)FLR2	21584.8	24104.2	31799.8
D4AE98	D4AE98	D4AE98_RAT	Exosc8	Exosome component 8	1	AEFAAPPVDAPDR	AEFAAPPVDAPDR	2	AEFAAPPVDAPDR2	8563.94		4334.78
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	AEFCWVCLGPWEPHGSAWYNCNR	AEFC(UniMod:4)WVC(UniMod:4)LGPWEPHGSAWYNC(UniMod:4)NR	3	AEFC(UniMod:4)WVC(UniMod:4)LGPWEPHGSAWYNC(UniMod:4)NR3	20055.7	21352.6	18545.1
Q499P3	Q499P3	C1GLC_RAT	C1galt1c1	C1GALT1-specific chaperone 1	1	AEFFSSENVK	AEFFSSENVK	2	AEFFSSENVK2	21451.4	19195	33399.7
P97633	P97633	KC1A_RAT	Csnk1a1	Casein kinase I isoform alpha	1	AEFIVGGK	AEFIVGGK	2	AEFIVGGK2	7085.37	7059.27	
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AEFTVETR	AEFTVETR	2	AEFTVETR2	1.0386e+06	930160	1.20526e+06
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	AEFVFEWLR	AEFVFEWLR	2	AEFVFEWLR2	23321.4	16078.2	18648.7
P09215	P09215	KPCD_RAT	Prkcd	Protein kinase C delta type	1	AEFWLDLQPQAK	AEFWLDLQPQAK	2	AEFWLDLQPQAK2	24465.7	19566.4	18201
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	AEGDAAALNR	AEGDAAALNR	2	AEGDAAALNR2	1.86175e+07	1.84546e+07	1.93176e+07
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	AEGDAAALNRR	AEGDAAALNRR	2	AEGDAAALNRR2		28843	
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	AEGDAAALNRR	AEGDAAALNRR	3	AEGDAAALNRR3	13192.4	17750.1	20798.3
Q9ER24	Q9ER24	ATX10_RAT	Atxn10	Ataxin-10	1	AEGDIEHMTEGFK	AEGDIEHMTEGFK	3	AEGDIEHMTEGFK3	16337.9	10299.2	9343.6
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	AEGDRPEVTESISPSDR	AEGDRPEVTESISPSDR	3	AEGDRPEVTESISPSDR3	10598.4	6244.71	14499.9
F1M2D4	F1M2D4	F1M2D4_RAT	Arhgap23	Rho GTPase activating protein 23	1	AEGEDPGCANQALISK	AEGEDPGC(UniMod:4)ANQALISK	2	AEGEDPGC(UniMod:4)ANQALISK2	1779.18	1124.38	783.537
Q63415	Q63415	PCSK6_RAT	Pcsk6	Proprotein convertase subtilisin/kexin type 6	1	AEGEWTLEVQDIPSQVR	AEGEWTLEVQDIPSQVR	2	AEGEWTLEVQDIPSQVR2		4062.62	3025.6
E9PSX4	E9PSX4	E9PSX4_RAT	Il3ra	Interleukin 3 receptor subunit alpha	1	AEGGALGPR	AEGGALGPR	2	AEGGALGPR2	19349.5	17570.2	24930.4
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	AEGILDVFQTVK	AEGILDVFQTVK	2	AEGILDVFQTVK2	44553.8	41174.1	46917.3
D4A929	D4A929	WDR81_RAT	Wdr81	WD repeat-containing protein 81	1	AEGLGEAEVR	AEGLGEAEVR	2	AEGLGEAEVR2	9688.9	21228.8	18280.9
D4ABL6	D4ABL6	MCTP1_RAT	Mctp1	Multiple C2 and transmembrane domain-containing protein 1	1	AEGLMAADVTGK	AEGLMAADVTGK	2	AEGLMAADVTGK2	8130.86	7449.07	13951.8
D3ZKE0	D3ZKE0	D3ZKE0_RAT	Gnptab	N-acetylglucosamine-1-phosphate transferase subunits alpha and beta	1	AEGNADSHVPVNELVPGR	AEGNADSHVPVNELVPGR	3	AEGNADSHVPVNELVPGR3	2982.51		2688.91
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	AEGNDHIER	AEGNDHIER	2	AEGNDHIER2			4289.27
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	AEGNPKPEIIWLR	AEGNPKPEIIWLR	3	AEGNPKPEIIWLR3	104134	89650	95863.8
A0A0G2JUA5	A0A0G2JUA5	A0A0G2JUA5_RAT	Ahnak	AHNAK nucleoprotein	1	AEGPEVDVSLPK	AEGPEVDVSLPK	2	AEGPEVDVSLPK2	9942.46	6741.28	11890.5
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AEGPGLNR	AEGPGLNR	2	AEGPGLNR2	8.00741e+06	9.41309e+06	9.32967e+06
D3ZHA0	D3ZHA0	FLNC_RAT	Flnc	Filamin-C	1	AEGPGLSR	AEGPGLSR	2	AEGPGLSR2	8998.2	10815.5	
P35427	P35427;A0A8I6GK92	RL13A_RAT	Rpl13a	Large ribosomal subunit protein uL13	0	AEGQVLVLDGR	AEGQVLVLDGR	2	AEGQVLVLDGR2	11424.7	17959.9	6085.45
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	AEGSDVANAVLDGADCIMLSGETAK	AEGSDVANAVLDGADC(UniMod:4)IMLSGETAK	3	AEGSDVANAVLDGADC(UniMod:4)IMLSGETAK3	84808.2	52668.9	67427
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	AEGSEYQVLYIADDNEIR	AEGSEYQVLYIADDNEIR	3	AEGSEYQVLYIADDNEIR3	31407.9	19750.5	29858.4
Q62720	Q62720	ZNT1_RAT	Slc30a1	Proton-coupled zinc antiporter SLC30A1	1	AEGSVPAVVIEIK	AEGSVPAVVIEIK	2	AEGSVPAVVIEIK2	57257.9	42085.2	42472.3
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	AEGTTYRDELLTK	AEGTTYRDELLTK	2	AEGTTYRDELLTK2	3238.25	2908.2	3941.61
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	AEGTTYRDELLTK	AEGTTYRDELLTK	3	AEGTTYRDELLTK3	258277	286417	257066
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	AEGVLAAQAR	AEGVLAAQAR	2	AEGVLAAQAR2	20442.2	16736.4	25596.8
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	AEHCVNTPGSFQCYK	AEHC(UniMod:4)VNTPGSFQC(UniMod:4)YK	2	AEHC(UniMod:4)VNTPGSFQC(UniMod:4)YK2	23913.3	31381.8	25841.2
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	AEHCVNTPGSFQCYK	AEHC(UniMod:4)VNTPGSFQC(UniMod:4)YK	3	AEHC(UniMod:4)VNTPGSFQC(UniMod:4)YK3	91492.8	185069	180854
P70615	P70615	LMNB1_RAT	Lmnb1	Lamin-B1	1	AEHDQLLLNYAK	AEHDQLLLNYAK	3	AEHDQLLLNYAK3	6044.07	2196.41	
Q5XHY5	Q5XHY5	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	1	AEHDSILAEK	AEHDSILAEK	2	AEHDSILAEK2	8469.16		3169.03
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AEHGSVALPAIMR	AEHGSVALPAIMR	2	AEHGSVALPAIMR2	157904	178734	128203
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AEHGSVALPAIMR	AEHGSVALPAIMR	3	AEHGSVALPAIMR3	4.2013e+06	4.26177e+06	4.16783e+06
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	AEHIPAGK	AEHIPAGK	2	AEHIPAGK2	44041.2		63745.3
B2BKY8	B2BKY8	B2BKY8_RAT	Cntrob	Centrobin, centriole duplication and spindle assembly protein	1	AEHPFPEEDPGPEGDGPLK	AEHPFPEEDPGPEGDGPLK	3	AEHPFPEEDPGPEGDGPLK3	14903.7	8444.56	14709.5
P52632	P52632	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	1	AEHQVGEDGFLLK	AEHQVGEDGFLLK	2	AEHQVGEDGFLLK2	3766.15	4418.86	5873.01
P52632	P52632	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	1	AEHQVGEDGFLLK	AEHQVGEDGFLLK	3	AEHQVGEDGFLLK3	21011	23656.7	18102
A0A8I6ARU6	A0A8I6ARU6	A0A8I6ARU6_RAT	Galk1	Galactokinase 1	1	AEHSFAGVPCGIMDQLIALLGQK	AEHSFAGVPC(UniMod:4)GIMDQLIALLGQK	3	AEHSFAGVPC(UniMod:4)GIMDQLIALLGQK3	3536.02		
Q9Z272	Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	1	AEHTLMGPGGSTHR	AEHTLMGPGGSTHR	3	AEHTLMGPGGSTHR3	7216.01	7471.77	3266.39
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	AEHVLTVVASDHGSPPR	AEHVLTVVASDHGSPPR	4	AEHVLTVVASDHGSPPR4	3776.1	4763.59	3939.63
A0A8I6G6W8	A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	AEHVPSGPPR	AEHVPSGPPR	2	AEHVPSGPPR2	2813.84		
Q62796	Q62796	RBP1_RAT	Ralbp1	RalA-binding protein 1	1	AEIAEIQSR	AEIAEIQSR	2	AEIAEIQSR2	4355.59	12794.4	6779.31
G3V985	G3V985	G3V985_RAT	Sco1	Synthesis of cytochrome C oxidase 1	1	AEIAGSIAAHMR	AEIAGSIAAHMR	3	AEIAGSIAAHMR3	4312.06	6986.9	4545.54
A0A8I6A0I2	A0A8I6A0I2	A0A8I6A0I2_RAT	Piezo2	Piezo-type mechanosensitive ion channel component	1	AEIATDK	AEIATDK	1	AEIATDK1	19102.8	20586.7	19100.2
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	AEIDLVCELAK	AEIDLVC(UniMod:4)ELAK	2	AEIDLVC(UniMod:4)ELAK2	23650.3	29979.3	17516.1
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	AEIELEYSR	AEIELEYSR	2	AEIELEYSR2	81738.2	63242.6	74335.7
Q66HG5	Q66HG5	TM9S2_RAT	Tm9sf2	Transmembrane 9 superfamily member 2	1	AEIELFVNR	AEIELFVNR	2	AEIELFVNR2	99850.2	101954	75900.1
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	AEIEMDYSR	AEIEMDYSR	2	AEIEMDYSR2	30633.6	26547.5	27993.2
B2RYB1	A0A8I6AGB3;B2RYB1	B2RYB1_RAT	Txndc11	Thioredoxin domain containing 11	0	AEIEQAASR	AEIEQAASR	2	AEIEQAASR2	6694.38	8132.33	6089.6
P51158	P51158	RAB28_RAT	Rab28	Ras-related protein Rab-28	1	AEIEQSQR	AEIEQSQR	2	AEIEQSQR2			30019.7
P18596	P18596;Q64578	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	0	AEIGIAMGSGTAVAK	AEIGIAMGSGTAVAK	2	AEIGIAMGSGTAVAK2	330785	287318	263116
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	AEIHDLQEEHIK	AEIHDLQEEHIK	3	AEIHDLQEEHIK3	8661.54		4741.51
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	AEIHDLQEEHIKER	AEIHDLQEEHIKER	4	AEIHDLQEEHIKER4	6518.26	7454.8	10359.3
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	AEIHTQPSDK	AEIHTQPSDK	2	AEIHTQPSDK2			18399
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	AEIHTQPSDKER	AEIHTQPSDKER	2	AEIHTQPSDKER2			14008.6
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	AEIHTQPSDKER	AEIHTQPSDKER	3	AEIHTQPSDKER3			33847.9
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	AEIINHLADLLTDQR	AEIINHLADLLTDQR	3	AEIINHLADLLTDQR3	6054.81		7739.94
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	AEIINHLADLLTDQREEILLANK	AEIINHLADLLTDQREEILLANK	3	AEIINHLADLLTDQREEILLANK3	3786.78	10246.6	1387.01
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	AEIINHLADLLTDQREEILLANK	AEIINHLADLLTDQREEILLANK	4	AEIINHLADLLTDQREEILLANK4	17754.8	17609.5	
P0C0A1	P0C0A1	VPS25_RAT	Vps25	Vacuolar protein-sorting-associated protein 25	1	AEIITVSDGR	AEIITVSDGR	2	AEIITVSDGR2	22822	19267.5	20992.5
P35435	P35435	ATPG_RAT	Atp5f1c	ATP synthase subunit gamma, mitochondrial	1	AEIKGPEDK	AEIKGPEDK	2	AEIKGPEDK2	98756.8	68953.6	87766.1
P35435	P35435	ATPG_RAT	Atp5f1c	ATP synthase subunit gamma, mitochondrial	1	AEIKGPEDKK	AEIKGPEDKK	2	AEIKGPEDKK2			7965.75
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	AEILFLK	AEILFLK	2	AEILFLK2	32904.8	34878	27334.9
Q91XS8	Q91XS8	ST17B_RAT	Stk17b	Serine/threonine-protein kinase 17B	1	AEILHEIAVLELAR	AEILHEIAVLELAR	3	AEILHEIAVLELAR3	5090.85	5417.34	5060.71
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	AEILNLVK	AEILNLVK	2	AEILNLVK2	28083.6	29460.4	23583.6
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	AEILPASGAEFCK	AEILPASGAEFC(UniMod:4)K	2	AEILPASGAEFC(UniMod:4)K2	13704.1	9893.82	20116.6
I6L9G5	I6L9G5	RCN3_RAT	Rcn3	Reticulocalbin-3	1	AEILSNWNMFVGSQATNYGEDLTR	AEILSNWNMFVGSQATNYGEDLTR	3	AEILSNWNMFVGSQATNYGEDLTR3	10330.8	22147.8	15688.6
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	AEINPLNLPHTASPVSFK	AEINPLNLPHTASPVSFK	2	AEINPLNLPHTASPVSFK2	20755.1	26857	26868.7
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	AEINPLNLPHTASPVSFK	AEINPLNLPHTASPVSFK	3	AEINPLNLPHTASPVSFK3	554014	560989	577491
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	AEIPEQFGPIR	AEIPEQFGPIR	2	AEIPEQFGPIR2	259434	227434	290216
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	AEISCIDNK	AEISC(UniMod:4)IDNK	2	AEISC(UniMod:4)IDNK2	15112.7	10514.3	9454.05
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AEISCTDNQDGTCSVSYLPVLPGDYSILVK	AEISC(UniMod:4)TDNQDGTC(UniMod:4)SVSYLPVLPGDYSILVK	4	AEISC(UniMod:4)TDNQDGTC(UniMod:4)SVSYLPVLPGDYSILVK4	18325.4	11610.8	10306.2
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	AEISEFAPPHTPVVLVK	AEISEFAPPHTPVVLVK	2	AEISEFAPPHTPVVLVK2	7458.18	6908.43	9707.18
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	AEISEFAPPHTPVVLVK	AEISEFAPPHTPVVLVK	3	AEISEFAPPHTPVVLVK3	151830	133210	141521
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AEISFEDR	AEISFEDR	2	AEISFEDR2	2.86464e+06	2.50452e+06	2.94815e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AEISFEDRK	AEISFEDRK	2	AEISFEDRK2	1.09076e+06	982528	1.10967e+06
Q5RKI6	Q5RKI6	EIF1A_RAT	Eif1ad	Probable RNA-binding protein EIF1AD	1	AEISFVLCK	AEISFVLC(UniMod:4)K	2	AEISFVLC(UniMod:4)K2	9815.44	8323.92	13367.1
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	AEITDAEGLGLK	AEITDAEGLGLK	2	AEITDAEGLGLK2	74291.6	84172.1	78319.8
D4A2N2	D4A2N2	D4A2N2_RAT	Inpp5b	phosphoinositide 5-phosphatase	1	AEITDMVR	AEITDMVR	2	AEITDMVR2	25607.2	12683.9	22987.9
A0A8I6A1H4	A0A8I6A1H4	A0A8I6A1H4_RAT	Tmppe	Transmembrane protein with metallophosphoesterase domain	1	AEITELILWR	AEITELILWR	2	AEITELILWR2	13452.1	11368.2	4228.05
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	AEITLLVQGQEPPEFWDVLGGEPSEIKK	AEITLLVQGQEPPEFWDVLGGEPSEIKK	4	AEITLLVQGQEPPEFWDVLGGEPSEIKK4	11943.9	24914.9	21847.6
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	AEITSQESQISTYEEELSK	AEITSQESQISTYEEELSK	3	AEITSQESQISTYEEELSK3	22676.2	35742.6	30008
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	AEIVASVTAR	AEIVASVTAR	2	AEIVASVTAR2	420026	607493	617292
E9PTK4	E9PTK4	E9PTK4_RAT	Thnsl1	Threonine synthase-like 1	1	AEIVGSQR	AEIVGSQR	2	AEIVGSQR2			10425
P21775	P07871;P21775	THIKA_RAT	Acaa1a	3-ketoacyl-CoA thiolase A, peroxisomal	0	AEIVPVTTTVLDDK	AEIVPVTTTVLDDK	2	AEIVPVTTTVLDDK2	93364.9	81298.1	84332.3
P21775	P07871;P21775	THIKA_RAT	Acaa1a	3-ketoacyl-CoA thiolase A, peroxisomal	0	AEIVPVTTTVLDDKGDR	AEIVPVTTTVLDDKGDR	3	AEIVPVTTTVLDDKGDR3	14310.5	12425.3	16264.8
P21775	P07871;P21775	THIKA_RAT	Acaa1a	3-ketoacyl-CoA thiolase A, peroxisomal	0	AEIVPVTTTVLDDKGDRK	AEIVPVTTTVLDDKGDRK	3	AEIVPVTTTVLDDKGDRK3	18300.3	26778.6	19178
P21775	P07871;P21775	THIKA_RAT	Acaa1a	3-ketoacyl-CoA thiolase A, peroxisomal	0	AEIVPVTTTVLDDKGDRK	AEIVPVTTTVLDDKGDRK	4	AEIVPVTTTVLDDKGDRK4	14340.5	15297	14981.7
A0A8I6ADL4	A0A8I6ADL4	A0A8I6ADL4_RAT	Serinc3	Serine incorporator 3	1	AEKDCDVLVGFK	AEKDC(UniMod:4)DVLVGFK	3	AEKDC(UniMod:4)DVLVGFK3	4070.74	3731.27	
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	AEKELESHSSWYAPEALQK	AEKELESHSSWYAPEALQK	3	AEKELESHSSWYAPEALQK3	11303.5	4875.51	7916.58
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	AEKELESHSSWYAPEALQK	AEKELESHSSWYAPEALQK	4	AEKELESHSSWYAPEALQK4	75874.1	87205.5	83058.8
Q6NX65	Q6NX65	PDC10_RAT	Pdcd10	Programmed cell death protein 10	1	AEKENPGLTQDIIMK	AEKENPGLTQDIIMK	2	AEKENPGLTQDIIMK2	27963.9	23573	13819.3
Q6NX65	Q6NX65	PDC10_RAT	Pdcd10	Programmed cell death protein 10	1	AEKENPGLTQDIIMK	AEKENPGLTQDIIMK	3	AEKENPGLTQDIIMK3	65837.9	75673.9	83499.4
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	AEKPSALNSEEEAHEQSTEQDK	AEKPSALNSEEEAHEQSTEQDK	3	AEKPSALNSEEEAHEQSTEQDK3	146524	174364	133836
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	AEKPSALNSEEEAHEQSTEQDK	AEKPSALNSEEEAHEQSTEQDK	4	AEKPSALNSEEEAHEQSTEQDK4	72172.8	83252	77024.4
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	AELAELPLR	AELAELPLR	2	AELAELPLR2	10840.1	17603	6638.46
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	AELAESR	AELAESR	1	AELAESR1	47484.5	41936.4	45180
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	AELAESR	AELAESR	2	AELAESR2	5.3755e+06	5.54881e+06	5.9628e+06
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	AELAGALAEMETMK	AELAGALAEMETMK	2	AELAGALAEMETMK2	32996.9	22037.6	25973.6
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	AELAGALAEMETMK	AELAGALAEMETMK	3	AELAGALAEMETMK3	3743.05	3347.17	3919.96
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	AELALALLQETPR	AELALALLQETPR	2	AELALALLQETPR2	5322.95	9435.81	7389.28
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	AELANIER	AELANIER	2	AELANIER2	116691	114464	114966
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	AELATEEFLPVTPILEGFVILR	AELATEEFLPVTPILEGFVILR	3	AELATEEFLPVTPILEGFVILR3		8997.43	9794.63
A0A096MKE0	A0A096MKE0	A0A096MKE0_RAT	Asph	Aspartate-beta-hydroxylase	1	AELDAAEK	AELDAAEK	2	AELDAAEK2	42614.6	42901.4	51951.5
A0A8I6A502	A0A8I6A502	A0A8I6A502_RAT	Tns3	Tensin 3	1	AELDQLLSGFGLEDSANSHK	AELDQLLSGFGLEDSANSHK	3	AELDQLLSGFGLEDSANSHK3	3157.22	7490.45	1363.86
Q80W57	Q80W57	ABCG2_RAT	Abcg2	Broad substrate specificity ATP-binding cassette transporter ABCG2	1	AELDQLPVAQK	AELDQLPVAQK	2	AELDQLPVAQK2	11431.6	14062.7	9128.75
Q5M834	Q5M834	DTBP1_RAT	Dtnbp1	Dysbindin	1	AELDTEHAQK	AELDTEHAQK	2	AELDTEHAQK2	2451.47		2318.18
Q5M834	Q5M834	DTBP1_RAT	Dtnbp1	Dysbindin	1	AELDTEHAQK	AELDTEHAQK	3	AELDTEHAQK3	7742.57		
D3ZSQ1	D3ZSQ1	D3ZSQ1_RAT	Pcnx3	Pecanex-like protein	1	AELEAQPGMELAAGEPAMLPPEAR	AELEAQPGMELAAGEPAMLPPEAR	3	AELEAQPGMELAAGEPAMLPPEAR3	6451.25		
M0R515	M0R515	M0R515_RAT	Nudt13	NAD(+) diphosphatase	1	AELEGLLGK	AELEGLLGK	2	AELEGLLGK2	6315.93	5365.53	5668.89
M0RA86	M0RA86	M0RA86_RAT	Ccdc9	Coiled-coil domain containing 9	1	AELEGVAVTAPR	AELEGVAVTAPR	2	AELEGVAVTAPR2	28568.6	21033.1	30840.5
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	AELEGWR	AELEGWR	2	AELEGWR2	205546	164103	162571
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	AELEGWRK	AELEGWRK	2	AELEGWRK2	20330.5	18553.7	14637
P36972	P36972	APT_RAT	Aprt	Adenine phosphoribosyltransferase	1	AELEIQK	AELEIQK	2	AELEIQK2	50046.1	40552.4	41850
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	AELEMLSDK	AELEMLSDK	2	AELEMLSDK2	177233	197844	247293
D4AEK9	D4AEK9	D4AEK9_RAT	Ccdc6	Coiled-coil domain containing 6	1	AELEQHLEQEQEFQVNK	AELEQHLEQEQEFQVNK	3	AELEQHLEQEQEFQVNK3	338409	411674	398890
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	AELFTQSCADLDK	AELFTQSC(UniMod:4)ADLDK	2	AELFTQSC(UniMod:4)ADLDK2	461051	22819.6	503262
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	AELFTQSCADLDKWLHGLESQIQSDDYGK	AELFTQSC(UniMod:4)ADLDKWLHGLESQIQSDDYGK	4	AELFTQSC(UniMod:4)ADLDKWLHGLESQIQSDDYGK4	21146.3	25073	23654.5
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	AELGALPDDFIDSLEK	AELGALPDDFIDSLEK	2	AELGALPDDFIDSLEK2	21946.3	18861.8	24677.5
Q2PWT8	Q2PWT8	AP4M1_RAT	Ap4m1	AP-4 complex subunit mu-1	1	AELGEGALHWDLPR	AELGEGALHWDLPR	3	AELGEGALHWDLPR3	13041.6	8282.43	10173.4
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	AELGEYIR	AELGEYIR	2	AELGEYIR2	382849	415675	373810
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	AELGFLESCLR	AELGFLESC(UniMod:4)LR	2	AELGFLESC(UniMod:4)LR2	12566.9	15344.3	19303.5
A0A8I6GJ11	A0A8I6GJ11	A0A8I6GJ11_RAT	Acss2	propionate--CoA ligase	1	AELGMNDSPSQSPPVK	AELGMNDSPSQSPPVK	2	AELGMNDSPSQSPPVK2	2530.8	4649.84	1676.43
Q3KR57	Q3KR57	Q3KR57_RAT	Grap2	GRB2-related adaptor protein 2	1	AELGSQEGYVPK	AELGSQEGYVPK	2	AELGSQEGYVPK2	6877.56		3346.36
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	AELGVPEVLMFETEDLVLRK	AELGVPEVLMFETEDLVLRK	3	AELGVPEVLMFETEDLVLRK3	4935.66	6749.02	8905.04
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	AELHVLSVK	AELHVLSVK	2	AELHVLSVK2	10812	10936.5	11061.4
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	AELINIHHLMVELK	AELINIHHLMVELK	3	AELINIHHLMVELK3	3239.52	6074.93	16338.4
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	AELINIHHLMVELK	AELINIHHLMVELK	4	AELINIHHLMVELK4	6581.28	4995.21	8149.06
Q5BJT7	Q5BJT7	CCD93_RAT	Ccdc93	Coiled-coil domain-containing protein 93	1	AELIQYQK	AELIQYQK	2	AELIQYQK2	9720.96	11614.5	10861.7
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	AELLEFLESQQENMIK	AELLEFLESQQENMIK	2	AELLEFLESQQENMIK2	6376.98	7962.8	9236.37
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	AELLEFLESQQENMIK	AELLEFLESQQENMIK	3	AELLEFLESQQENMIK3	4623.08	5589.05	10800.7
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	AELLISTVGPEECVVPFLTRPK	AELLISTVGPEEC(UniMod:4)VVPFLTRPK	3	AELLISTVGPEEC(UniMod:4)VVPFLTRPK3	26302.3	19664.7	19373.3
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	AELLLEEAK	AELLLEEAK	2	AELLLEEAK2	66198.7	94894.4	57827.1
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	AELLLEEAKR	AELLLEEAKR	3	AELLLEEAKR3	8408.04	11303.4	7767.58
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	AELLQNEAK	AELLQNEAK	2	AELLQNEAK2	62871	55791.7	75879.3
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	AELLVAEAPSKPITVTVEEQR	AELLVAEAPSKPITVTVEEQR	3	AELLVAEAPSKPITVTVEEQR3	81817.4	112626	87375.1
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	AELMEQVPHIALFCQENRPSIPYAFSK	AELMEQVPHIALFC(UniMod:4)QENRPSIPYAFSK	4	AELMEQVPHIALFC(UniMod:4)QENRPSIPYAFSK4	14997.2	32252.2	25777
P62909	D3ZVH2;P62909	RS3_RAT	Rps3	Small ribosomal subunit protein uS3	0	AELNEFLTR	AELNEFLTR	2	AELNEFLTR2	31953.3	37299.5	21739.6
P62944	P62944;A0A8I6G475;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	AELNNEK	AELNNEK	2	AELNNEK2			47698
P52303	P52303	AP1B1_RAT	Ap1b1	AP-1 complex subunit beta-1	1	AELNSDK	AELNSDK	2	AELNSDK2			34891.3
M0RCP2	M0RCP2	M0RCP2_RAT	Sh3pxd2b	SH3 and PX domains 2B	1	AELPEEK	AELPEEK	2	AELPEEK2		13202.6	10732.3
A0A1W2Q642	A0A1W2Q642	A0A1W2Q642_RAT	Pi16	Peptidase inhibitor 16	1	AELPEREDELPEAEVELPEAEAELPEAK	AELPEREDELPEAEVELPEAEAELPEAK	4	AELPEREDELPEAEVELPEAEAELPEAK4	756417	801927	906091
Q4QQS7	Q4QQS7	Q4QQS7_RAT	Umps	Uridine 5'-monophosphate synthase	1	AELPGVHPLASK	AELPGVHPLASK	3	AELPGVHPLASK3	11810.9	13395.8	11006.8
A0A096MJF9	A0A096MJF9	A0A096MJF9_RAT	Tmem132e	Transmembrane protein 132E	1	AELPLAWFGPPAPAAPPSTR	AELPLAWFGPPAPAAPPSTR	3	AELPLAWFGPPAPAAPPSTR3	8204.25	7606.33	8907.72
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	AELPTKR	AELPTKR	2	AELPTKR2	56034.1	66126	79257.8
A0A1W2Q642	A0A1W2Q642	A0A1W2Q642_RAT	Pi16	Peptidase inhibitor 16	1	AELPVSSEALVPVLPAQER	AELPVSSEALVPVLPAQER	3	AELPVSSEALVPVLPAQER3	3.28943e+06	3.5259e+06	4.0696e+06
P70483	P70483	STRN_RAT	Strn	Striatin	1	AELQAQIAFLQGER	AELQAQIAFLQGER	2	AELQAQIAFLQGER2	36840.8	27100.8	37989.8
P70483	P70483	STRN_RAT	Strn	Striatin	1	AELQAQIAFLQGER	AELQAQIAFLQGER	3	AELQAQIAFLQGER3	23231.2	25567.9	16011.3
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	AELQAQLAALSTR	AELQAQLAALSTR	2	AELQAQLAALSTR2	5102.06	5540.03	6170.56
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	AELQLDLQK	AELQLDLQK	2	AELQLDLQK2	43427.4	31612.5	40659.4
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	AELQLDLQKPR	AELQLDLQKPR	2	AELQLDLQKPR2	601389	501628	533657
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	AELQLDLQKPR	AELQLDLQKPR	3	AELQLDLQKPR3	106787	7.05668e+06	7.81111e+06
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	AELQTALAHTQQAAR	AELQTALAHTQQAAR	2	AELQTALAHTQQAAR2	3875.16	6097.68	5071.85
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	AELQTALAHTQQAAR	AELQTALAHTQQAAR	3	AELQTALAHTQQAAR3	39327.3	45862	23493.7
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	AELRDDPIISTHLAK	AELRDDPIISTHLAK	2	AELRDDPIISTHLAK2	2458.41	1268.41	
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	AELRDDPIISTHLAK	AELRDDPIISTHLAK	3	AELRDDPIISTHLAK3	32228.1	11986.4	30676.1
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	AELRDDPIISTHLAK	AELRDDPIISTHLAK	4	AELRDDPIISTHLAK4	222480	200215	213982
P04692	P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	1	AELSEGK	AELSEGK	1	AELSEGK1	21019.2		46339.5
A0A8I6A193	A0A8I6A193	A0A8I6A193_RAT	Ccdc167	Coiled-coil domain-containing protein 167	1	AELSPEDR	AELSPEDR	2	AELSPEDR2	17338	10356.2	8169
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	AELSVIFADKPEK	AELSVIFADKPEK	3	AELSVIFADKPEK3	12670.5	12983.2	16874.4
A0A096MJF9	A0A096MJF9	A0A096MJF9_RAT	Tmem132e	Transmembrane protein 132E	1	AELTISESCQK	AELTISESC(UniMod:4)QK	2	AELTISESC(UniMod:4)QK2	12686	11694.5	11316.6
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	AELTLGLR	AELTLGLR	2	AELTLGLR2	48629.1	50923.2	51304.5
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	AELTMAALCGR	AELTMAALC(UniMod:4)GR	2	AELTMAALC(UniMod:4)GR2	17389.7	10485.2	11745.4
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	AELVPYLLK	AELVPYLLK	2	AELVPYLLK2	35184.2	31967.8	39560.4
F7FE56	F7FE56	F7FE56_RAT	Tpd52l1	TPD52 like 1	1	AELVQLEEEITTLR	AELVQLEEEITTLR	2	AELVQLEEEITTLR2	40468.7	30752.5	30862.7
F7FE56	F7FE56	F7FE56_RAT	Tpd52l1	TPD52 like 1	1	AELVQLEEEITTLR	AELVQLEEEITTLR	3	AELVQLEEEITTLR3	31495.8	22806.9	17776.1
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	AEMAVPDFSELFK	AEMAVPDFSELFK	2	AEMAVPDFSELFK2	8286.38	6531.01	6320.84
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	AEMDLSGR	AEMDLSGR	2	AEMDLSGR2	1.52545e+06	1.3912e+06	1.54987e+06
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	AEMDREDSEHVK	AEMDREDSEHVK	2	AEMDREDSEHVK2			8460.02
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	AEMDREDSEHVK	AEMDREDSEHVK	3	AEMDREDSEHVK3			767793
Q02253	Q02253	MMSA_RAT	Aldh6a1	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial	1	AEMEAAVAACK	AEMEAAVAAC(UniMod:4)K	2	AEMEAAVAAC(UniMod:4)K2	23041	18019.1	15344
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	AEMEEVER	AEMEEVER	2	AEMEEVER2	274541	270933	277562
Q5XFW6	Q5XFW6	WDR6_RAT	Wdr6	WD repeat-containing protein 6	1	AEMHCFSLMITPDASTPSR	AEMHC(UniMod:4)FSLMITPDASTPSR	3	AEMHC(UniMod:4)FSLMITPDASTPSR3	7800.27	5520.35	7451.17
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	AEMLDHAVLLQVIK	AEMLDHAVLLQVIK	3	AEMLDHAVLLQVIK3	11570.2	14783.5	9077.78
F1LXR9	F1LXR9	F1LXR9_RAT	Irag2	Inositol 1,4,5-triphosphate receptor associated 2	1	AEMLGAINQESR	AEMLGAINQESR	2	AEMLGAINQESR2	6854.34	1719.01	4572.97
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	AEMLQALASLEAVLLQTVYNTK	AEMLQALASLEAVLLQTVYNTK	3	AEMLQALASLEAVLLQTVYNTK3	9149.02		
P20673	P20673	ARLY_RAT	Asl	Argininosuccinate lyase	1	AEMQQILQGLDK	AEMQQILQGLDK	2	AEMQQILQGLDK2	16319.6	10424.5	6407.27
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	AEMTGEHNANLNGK	AEMTGEHNANLNGK	2	AEMTGEHNANLNGK2	29755.7	23014.6	20805.7
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	AEMTGEHNANLNGK	AEMTGEHNANLNGK	3	AEMTGEHNANLNGK3	709122	919693	802165
A0A8I5Y4X4	A0A8I5Y4X4	A0A8I5Y4X4_RAT	Nub1	Negative regulator of ubiquitin-like proteins 1	1	AEMVVDPETMPYLDIANQTGR	AEMVVDPETMPYLDIANQTGR	3	AEMVVDPETMPYLDIANQTGR3	4906.13	9302.47	6032.03
P36511	P19488;P08542;F1M3E3;P36511	UDB15_RAT	Ugt2b15	UDP-glucuronosyltransferase 2B15	0	AEMWLIR	AEMWLIR	2	AEMWLIR2	12149.4	15037.9	7977.4
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	AEMYLQGALK	AEMYLQGALK	2	AEMYLQGALK2	6402.4	4125.28	12738.8
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	AENAAASPEVGSADVANVAQK	AENAAASPEVGSADVANVAQK	3	AENAAASPEVGSADVANVAQK3	6778.1	8508.66	5065.08
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	AENACVPPFTVEVK	AENAC(UniMod:4)VPPFTVEVK	2	AENAC(UniMod:4)VPPFTVEVK2	235123	206269	284709
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	AENACVPPFTVEVK	AENAC(UniMod:4)VPPFTVEVK	3	AENAC(UniMod:4)VPPFTVEVK3	15657.9	18599.7	29727.1
D3ZTD8	D3ZTD8	SEM5A_RAT	Sema5a	Semaphorin-5A	1	AENAVDFSR	AENAVDFSR	2	AENAVDFSR2	7350.2	1508.7	5342.05
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	AENAWKPSQK	AENAWKPSQK	3	AENAWKPSQK3	4176.48	9219.02	4568.12
D3ZUU6	D3ZUU6	D3ZUU6_RAT	Clec3b	C-type lectin domain family 3, member B	1	AENCAALSGAANGK	AENC(UniMod:4)AALSGAANGK	2	AENC(UniMod:4)AALSGAANGK2	40922.3	29940.1	24392.5
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	AENEALAMQK	AENEALAMQK	2	AENEALAMQK2	2.00971e+06	2.10541e+06	2.15699e+06
B2RZ72	B2RZ72	B2RZ72_RAT	Arpc4	Actin-related protein 2/3 complex subunit 4	1	AENFFILR	AENFFILR	2	AENFFILR2	478003	440330	523269
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	AENGDFASFR	AENGDFASFR	2	AENGDFASFR2	1.62817e+06	1.6496e+06	1.85005e+06
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	AENGDFASFRVER	AENGDFASFRVER	3	AENGDFASFRVER3	8879.96	11390.8	11695.3
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	AENIMASLER	AENIMASLER	2	AENIMASLER2	33819.5	37320.9	31282.3
A0A8I6G6W8	A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	AENKGNDPNVNIVPK	AENKGNDPNVNIVPK	3	AENKGNDPNVNIVPK3	3856.69	7507.43	4596.92
Q4KLL4	Q4KLL4	TM9S4_RAT	Tm9sf4	Transmembrane 9 superfamily member 4	1	AENLGEVLR	AENLGEVLR	2	AENLGEVLR2	138841	143196	144058
Q4KLL4	Q4KLL4	TM9S4_RAT	Tm9sf4	Transmembrane 9 superfamily member 4	1	AENLGEVLRGDR	AENLGEVLRGDR	3	AENLGEVLRGDR3	94008.8	121476	121522
M0RD40	M0RD40	M0RD40_RAT	Sik3	non-specific serine/threonine protein kinase	1	AENLLLDANLNIK	AENLLLDANLNIK	2	AENLLLDANLNIK2	3993.24	5897.36	3162.13
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	AENMYAQIK	AENMYAQIK	2	AENMYAQIK2	13367.7	5072	16132.7
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	AENMYAQIKDEVR	AENMYAQIKDEVR	2	AENMYAQIKDEVR2	1765.43		
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	AENMYAQIKDEVR	AENMYAQIKDEVR	3	AENMYAQIKDEVR3	44072.2	36993.1	52647.9
A0A8I6GFC7	A0A8I6GFC7	A0A8I6GFC7_RAT	Ubp1	Upstream binding protein 1	1	AENNDGIHIILK	AENNDGIHIILK	3	AENNDGIHIILK3	981.442	6899.4	
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	AENQRPVEDSALSPGPLAGAK	AENQRPVEDSALSPGPLAGAK	3	AENQRPVEDSALSPGPLAGAK3	270133	304175	295096
D4A7N1	D4A7N1	MIC25_RAT	Chchd6	MICOS complex subunit Mic25	1	AENSDGQQSSAVK	AENSDGQQSSAVK	2	AENSDGQQSSAVK2			7537.53
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	AENSQLTER	AENSQLTER	2	AENSQLTER2		30467.8	
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	AENSSLNLIGK	AENSSLNLIGK	2	AENSSLNLIGK2	53329.6	52848.8	45691.1
P23711	P23711;O70453	HMOX2_RAT	Hmox2	Heme oxygenase 2	0	AENTQFVK	AENTQFVK	2	AENTQFVK2	59398.7	55526.8	56198.5
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	AENYDISPADR	AENYDISPADR	2	AENYDISPADR2	194251	144982	147727
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	AENYDISPADR	AENYDISPADR	3	AENYDISPADR3	3643.91	3483.64	
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	AEPAAPPVTPPAPALPPVVPK	AEPAAPPVTPPAPALPPVVPK	3	AEPAAPPVTPPAPALPPVVPK3	12866.9	14225.6	12685.9
Q9EQX9	Q9EQX9	UBE2N_RAT	Ube2n	Ubiquitin-conjugating enzyme E2 N	1	AEPDESNAR	AEPDESNAR	2	AEPDESNAR2			14229.9
Q4V7C7	Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	1	AEPEDHYFLLTEPPLNTPENR	AEPEDHYFLLTEPPLNTPENR	3	AEPEDHYFLLTEPPLNTPENR3	352119	298795	316991
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	AEPEILELESK	AEPEILELESK	2	AEPEILELESK2	135501	151063	139002
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	AEPFFIR	AEPFFIR	2	AEPFFIR2	114612	110363	112104
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	AEPHFLSILQHLLLVR	AEPHFLSILQHLLLVR	3	AEPHFLSILQHLLLVR3	9362.24	11208.6	9792.08
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	AEPHFLSILQHLLLVR	AEPHFLSILQHLLLVR	4	AEPHFLSILQHLLLVR4	7907.06	10106.8	5721.97
Q4V7F2	Q4V7F2	CREL1_RAT	Creld1	Protein disulfide isomerase Creld1	1	AEPHPCHTCR	AEPHPC(UniMod:4)HTC(UniMod:4)R	2	AEPHPC(UniMod:4)HTC(UniMod:4)R2			9763.18
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	AEPLALTFSHDYK	AEPLALTFSHDYK	2	AEPLALTFSHDYK2	62725.8	77938	149245
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	AEPLALTFSHDYK	AEPLALTFSHDYK	3	AEPLALTFSHDYK3	1.21962e+06	1.04379e+06	2.21008e+06
Q6AXR4	Q6AXR4	HEXB_RAT	Hexb	Beta-hexosaminidase subunit beta	1	AEPLNFEGSEK	AEPLNFEGSEK	2	AEPLNFEGSEK2	21742	22654.6	16108.2
B2RZB6	B2RZB6	B2RZB6_RAT	Lsm8	U6 snRNA-associated Sm-like protein LSm8	1	AEPLNSVAH	AEPLNSVAH	2	AEPLNSVAH2	54101.7	56773.4	46377
A0A0G2KA54	A0A0G2KA54	A0A0G2KA54_RAT	Kng1	Kininogen 1	1	AEPLTSSSEDSTTSTQIQGR	AEPLTSSSEDSTTSTQIQGR	3	AEPLTSSSEDSTTSTQIQGR3	53399.1	41075.9	41529.3
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	AEPLYELVTATDFAYSSTVK	AEPLYELVTATDFAYSSTVK	3	AEPLYELVTATDFAYSSTVK3	82933.5	99086	89761.9
D4A4T9	D4A4T9	CHRD1_RAT	Chordc1	Cysteine and histidine-rich domain-containing protein 1	1	AEPMQWASLELPTTK	AEPMQWASLELPTTK	2	AEPMQWASLELPTTK2	21051.3	12839.4	14986.6
M0RB87	M0RB87	M0RB87_RAT	Gdf2	Growth differentiation factor 2	1	AEPPQYMIDLYNR	AEPPQYMIDLYNR	2	AEPPQYMIDLYNR2	22842.7	16532.3	20027.2
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	AEPRPPVSRPPLIR	AEPRPPVSRPPLIR	4	AEPRPPVSRPPLIR4	94742.8	85319.4	94641.8
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	AEPSGGSDNGAQEVVK	AEPSGGSDNGAQEVVK	2	AEPSGGSDNGAQEVVK2	20009.4	32740	19821.1
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	AEPSVAEYTVR	AEPSVAEYTVR	2	AEPSVAEYTVR2	221239	223149	203956
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	AEPTLEAK	AEPTLEAK	2	AEPTLEAK2	36805.6	40797.5	36878.4
Q63678	Q63678	ZA2G_RAT	Azgp1	Zinc-alpha-2-glycoprotein	1	AEPVEPWSHVEGMEDWEK	AEPVEPWSHVEGMEDWEK	3	AEPVEPWSHVEGMEDWEK3	57127	38572.7	52016.1
Q63678	Q63678	ZA2G_RAT	Azgp1	Zinc-alpha-2-glycoprotein	1	AEPVEPWSHVEGMEDWEKESQLQR	AEPVEPWSHVEGMEDWEKESQLQR	3	AEPVEPWSHVEGMEDWEKESQLQR3	9443.47	5254.56	
Q63678	Q63678	ZA2G_RAT	Azgp1	Zinc-alpha-2-glycoprotein	1	AEPVEPWSHVEGMEDWEKESQLQR	AEPVEPWSHVEGMEDWEKESQLQR	4	AEPVEPWSHVEGMEDWEKESQLQR4	7386.03	11943.2	9887.4
D3ZZL9	D3ZZL9	GCC2_RAT	Gcc2	GRIP and coiled-coil domain-containing protein 2	1	AEQAAVTSEFENYK	AEQAAVTSEFENYK	2	AEQAAVTSEFENYK2	2378.46		2919.2
P04692	P58775;P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	0	AEQAEADK	AEQAEADK	1	AEQAEADK1	2157.7		2118.68
P04692	P58775;P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	0	AEQAEADK	AEQAEADK	2	AEQAEADK2	6034.68	1996.8	
Q5XIL2	Q5XIL2	P4K2B_RAT	Pi4k2b	Phosphatidylinositol 4-kinase type 2-beta	1	AEQAIEIGVFPER	AEQAIEIGVFPER	2	AEQAIEIGVFPER2		3646.73	3305.84
A2RRT9	A2RRT9	CP4V2_RAT	Cyp4v2	Cytochrome P450 4V2	1	AEQDCIGAGR	AEQDC(UniMod:4)IGAGR	2	AEQDC(UniMod:4)IGAGR2	1539.74		1451.3
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	AEQDIATLEQSISR	AEQDIATLEQSISR	2	AEQDIATLEQSISR2	410812	399007	421544
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	AEQDIATLEQSISR	AEQDIATLEQSISR	3	AEQDIATLEQSISR3	205236	178388	219540
D4AEK9	D4AEK9	D4AEK9_RAT	Ccdc6	Coiled-coil domain containing 6	1	AEQEEEFISNTLFK	AEQEEEFISNTLFK	2	AEQEEEFISNTLFK2	21574.3	24266.1	21582.2
D4AEK9	D4AEK9	D4AEK9_RAT	Ccdc6	Coiled-coil domain containing 6	1	AEQEEEFISNTLFK	AEQEEEFISNTLFK	3	AEQEEEFISNTLFK3	2900.86	5041.23	2936.37
Q63356	D4A7X9;Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	0	AEQEEYVQEGIR	AEQEEYVQEGIR	2	AEQEEYVQEGIR2	16037.8	23470	19064.8
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	AEQFLVGTSR	AEQFLVGTSR	2	AEQFLVGTSR2	49397.5	31852.9	41316
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	AEQFYCGDTEGK	AEQFYC(UniMod:4)GDTEGK	2	AEQFYC(UniMod:4)GDTEGK2	51179.1	45227.9	50557.1
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	AEQFYCGDTEGKK	AEQFYC(UniMod:4)GDTEGKK	2	AEQFYC(UniMod:4)GDTEGKK2	5750.58	3302.58	5503.2
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	AEQFYCGDTEGKK	AEQFYC(UniMod:4)GDTEGKK	3	AEQFYC(UniMod:4)GDTEGKK3	35530.7	45079.5	39443.8
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	AEQGAYLGPLPYK	AEQGAYLGPLPYK	2	AEQGAYLGPLPYK2	7.87117e+06	7.58667e+06	6.89194e+06
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	AEQGAYLGPLPYK	AEQGAYLGPLPYK	3	AEQGAYLGPLPYK3	307701	303331	262158
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	AEQGAYLGPLPYKGGENCIK	AEQGAYLGPLPYKGGENC(UniMod:4)IK	3	AEQGAYLGPLPYKGGENC(UniMod:4)IK3	7693.07	8261.75	
Q4FZT0	Q4FZT0	STML2_RAT	Stoml2	Stomatin-like protein 2, mitochondrial	1	AEQINQAAGEASAVLAK	AEQINQAAGEASAVLAK	2	AEQINQAAGEASAVLAK2	14735.8	13372.7	10642.6
Q4FZT0	Q4FZT0	STML2_RAT	Stoml2	Stomatin-like protein 2, mitochondrial	1	AEQINQAAGEASAVLAK	AEQINQAAGEASAVLAK	3	AEQINQAAGEASAVLAK3	5765.05	4912.13	1461.95
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	AEQLLQDAQR	AEQLLQDAQR	2	AEQLLQDAQR2	3944.09		
Q9QYM2	Q9QYM2	PARG_RAT	Parg	Poly(ADP-ribose) glycohydrolase	1	AEQLSASEPSAVTQAPK	AEQLSASEPSAVTQAPK	2	AEQLSASEPSAVTQAPK2	3250.56	1557.98	2719.73
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	AEQLSQENEK	AEQLSQENEK	2	AEQLSQENEK2	40283.3		35753.7
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	AEQPHQHAMYYLR	AEQPHQHAMYYLR	3	AEQPHQHAMYYLR3	10618.5	5329.58	7838.79
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	AEQPHQHAMYYLR	AEQPHQHAMYYLR	4	AEQPHQHAMYYLR4	8854.89	14754.8	8508.78
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	AEQQTADQLLAR	AEQQTADQLLAR	2	AEQQTADQLLAR2	101353	107761	104073
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	AEQQTADQLLAR	AEQQTADQLLAR	3	AEQQTADQLLAR3	21603.6	28688.5	30707.8
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	AEQREELATSFTSLLAYGLSLIR	AEQREELATSFTSLLAYGLSLIR	3	AEQREELATSFTSLLAYGLSLIR3	5167.46		
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	AEQSLHDLQER	AEQSLHDLQER	2	AEQSLHDLQER2	90331.3	93689.2	83006.4
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	AEQSLHDLQER	AEQSLHDLQER	3	AEQSLHDLQER3	280237	267078	227122
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	AEQVEGVINLGK	AEQVEGVINLGK	2	AEQVEGVINLGK2	25382.8	16333.3	24637
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	AEREGFESPENK	AEREGFESPENK	3	AEREGFESPENK3	13363.2	39612	22138.3
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	AERPDVDEK	AERPDVDEK	2	AERPDVDEK2			13504.4
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	AESAALHAGLR	AESAALHAGLR	2	AESAALHAGLR2	11040.4	12638.3	5182.35
Q5XIA4	Q5XIA4	CNO10_RAT	Cnot10	CCR4-NOT transcription complex subunit 10	1	AESAALIEAAK	AESAALIEAAK	2	AESAALIEAAK2		3519.89	7577.07
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	AESDLFLAEHHK	AESDLFLAEHHK	3	AESDLFLAEHHK3	3126.64	10505.2	6677.8
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	AESDVERNEWMQALQQAVVEHR	AESDVERNEWMQALQQAVVEHR	3	AESDVERNEWMQALQQAVVEHR3	5001.75	6998.29	4998.03
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	AESDVERNEWMQALQQAVVEHR	AESDVERNEWMQALQQAVVEHR	4	AESDVERNEWMQALQQAVVEHR4	38252.8	40994.6	39070.4
D3ZCT7	D3ZCT7	D3ZCT7_RAT	Sec23b	Protein transport protein SEC23	1	AESEEGPDVLR	AESEEGPDVLR	2	AESEEGPDVLR2	12412	13619.4	16574.1
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	AESEEMETSQAGSK	AESEEMETSQAGSK	2	AESEEMETSQAGSK2	209426	253707	1392.27
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	AESEEMETSQAGSKDK	AESEEMETSQAGSKDK	2	AESEEMETSQAGSKDK2			1339.43
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	AESEEMETSQAGSKDK	AESEEMETSQAGSKDK	3	AESEEMETSQAGSKDK3	14203.5		9453.27
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	AESEQLAR	AESEQLAR	2	AESEQLAR2	24782.7	33922.9	
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	AESEVPIVK	AESEVPIVK	2	AESEVPIVK2	28175.5	31171.7	33866
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	AESFYQK	AESFYQK	2	AESFYQK2	12302.2	13007.4	8990.57
Q5XIE1	Q5XIE1	THEM6_RAT	Them6	Protein THEM6	1	AESGLSDR	AESGLSDR	2	AESGLSDR2	64553.2		
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	AESGPDLR	AESGPDLR	2	AESGPDLR2	48762.9	56208.3	38459.2
Q4QQV8	Q4QQV8	CHMP5_RAT	Chmp5	Charged multivesicular body protein 5	1	AESIDKK	AESIDKK	1	AESIDKK1			997.586
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	AESIYEEMK	AESIYEEMK	2	AESIYEEMK2	30462.4	62663.5	7566.07
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	AESLQQEVEALK	AESLQQEVEALK	2	AESLQQEVEALK2	27939.5	34276.4	30542.9
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	AESLQQEVEALKER	AESLQQEVEALKER	2	AESLQQEVEALKER2	6994.43	5475.53	5765.52
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	AESLQQEVEALKER	AESLQQEVEALKER	3	AESLQQEVEALKER3	124963	103607	130287
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	AESLQVTR	AESLQVTR	2	AESLQVTR2	88026.5	78758.9	83596.9
Q9EPF2	Q9EPF2	MUC18_RAT	Mcam	Cell surface glycoprotein MUC18	1	AESNQDLEFEWLR	AESNQDLEFEWLR	2	AESNQDLEFEWLR2	15457.1	12680.7	16302.3
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	AESPEEVACR	AESPEEVAC(UniMod:4)R	2	AESPEEVAC(UniMod:4)R2	39371	43917.6	49550.6
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	AESPEEVACRK	AESPEEVAC(UniMod:4)RK	3	AESPEEVAC(UniMod:4)RK3	8667.05	9437.86	6238.65
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	AESPGPGSR	AESPGPGSR	2	AESPGPGSR2			18061
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	AESPQEPEEVEETQEDEKDQR	AESPQEPEEVEETQEDEKDQR	3	AESPQEPEEVEETQEDEKDQR3	52953.4	54066.8	44541.9
A0A096MJF9	A0A096MJF9	A0A096MJF9_RAT	Tmem132e	Transmembrane protein 132E	1	AESPTQHPLLR	AESPTQHPLLR	3	AESPTQHPLLR3	32896.4	37674.3	28736.8
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	AESPVFVQTDK	AESPVFVQTDK	2	AESPVFVQTDK2	89592.2	76182.3	63170
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	AESPVFVQTDKPIYK	AESPVFVQTDKPIYK	2	AESPVFVQTDKPIYK2	64262.4	66312.5	41060.4
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	AESPVFVQTDKPIYK	AESPVFVQTDKPIYK	3	AESPVFVQTDKPIYK3	803037	760204	632715
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	AESPVFVQTDKPIYKPGQTVK	AESPVFVQTDKPIYKPGQTVK	3	AESPVFVQTDKPIYKPGQTVK3	3.49022e+06	2.9484e+06	2.43476e+06
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	AESPVFVQTDKPIYKPGQTVK	AESPVFVQTDKPIYKPGQTVK	4	AESPVFVQTDKPIYKPGQTVK4	1.19643e+07	1.06339e+07	9.93308e+06
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	AESSPNAEPSDEGNSR	AESSPNAEPSDEGNSR	2	AESSPNAEPSDEGNSR2	176777		108766
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	AESSPNAEPSDEGNSR	AESSPNAEPSDEGNSR	3	AESSPNAEPSDEGNSR3	1716.49		5475.1
D4A7N1	D4A7N1	MIC25_RAT	Chchd6	MICOS complex subunit Mic25	1	AESTIKPR	AESTIKPR	2	AESTIKPR2			10306.5
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	AESTPEIAEQR	AESTPEIAEQR	2	AESTPEIAEQR2	217875	204928	227727
Q3ZAU6	Q3ZAU6	Q3ZAU6_RAT	Rnf14	RBR-type E3 ubiquitin transferase	1	AESVQGGETR	AESVQGGETR	2	AESVQGGETR2			5544.24
D4AD75	D4AD75	D4AD75_RAT	Dpy19l1	Dpy-19 like C-mannosyltransferase 1	1	AETAAPAPDGLAGR	AETAAPAPDGLAGR	2	AETAAPAPDGLAGR2	41522.3	41004.8	33929.6
Q7TT49	Q7TT49;O54874;D3Z837	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	0	AETACFR	AETAC(UniMod:4)FR	2	AETAC(UniMod:4)FR2	32053	21921.2	30065.6
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	AETAGEAQQAMLEGLQGILGR	AETAGEAQQAMLEGLQGILGR	3	AETAGEAQQAMLEGLQGILGR3	122105	130324	46316.4
Q91XU8	Q91XU8	CDS2_RAT	Cds2	Phosphatidate cytidylyltransferase 2	1	AETAPPPTSIDDTPEVLNR	AETAPPPTSIDDTPEVLNR	3	AETAPPPTSIDDTPEVLNR3	110954	130853	143460
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	AETAQDSSGLTPFK	AETAQDSSGLTPFK	2	AETAQDSSGLTPFK2	13541.2	8917.04	14886.6
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	AETAQPLWITLALQK	AETAQPLWITLALQK	2	AETAQPLWITLALQK2	64536.3	62476	40701.7
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	AETAQPLWITLALQK	AETAQPLWITLALQK	3	AETAQPLWITLALQK3	6381.68	3441.52	9101.91
Q5M8C6	Q5M8C6	FGL1_RAT	Fgl1	Fibrinogen-like protein 1	1	AETDNGVVWYTWR	AETDNGVVWYTWR	2	AETDNGVVWYTWR2	10095.3	16854.8	3577.09
B5DFC3	B5DFC3	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	1	AETEEGPDVLR	AETEEGPDVLR	2	AETEEGPDVLR2	9934.12	8248.36	5672.89
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	AETEEIPK	AETEEIPK	2	AETEEIPK2	27383.2	22341.3	21611.3
P02770	P02770	ALBU_RAT	Alb	Albumin	1	AETFTFHSDICTLPDK	AETFTFHSDIC(UniMod:4)TLPDK	2	AETFTFHSDIC(UniMod:4)TLPDK2	19124	7895.72	10252.3
P02770	P02770	ALBU_RAT	Alb	Albumin	1	AETFTFHSDICTLPDK	AETFTFHSDIC(UniMod:4)TLPDK	3	AETFTFHSDIC(UniMod:4)TLPDK3	116484	84815.2	95582.1
P02770	P02770	ALBU_RAT	Alb	Albumin	1	AETFTFHSDICTLPDKEK	AETFTFHSDIC(UniMod:4)TLPDKEK	3	AETFTFHSDIC(UniMod:4)TLPDKEK3	637926	637957	508810
P02770	P02770	ALBU_RAT	Alb	Albumin	1	AETFTFHSDICTLPDKEK	AETFTFHSDIC(UniMod:4)TLPDKEK	4	AETFTFHSDIC(UniMod:4)TLPDKEK4	2.83556e+06	1.40866e+06	1.11746e+06
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	AETLAGATVDETDESSGTR	AETLAGATVDETDESSGTR	2	AETLAGATVDETDESSGTR2	85109.8	80137.8	62741.3
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	AETLAGATVDETDESSGTR	AETLAGATVDETDESSGTR	3	AETLAGATVDETDESSGTR3	30709.1	20871.2	22660.8
Q9WUK5	Q9WUK5	INHBC_RAT	Inhbc	Inhibin beta C chain	1	AETLLEHDQR	AETLLEHDQR	2	AETLLEHDQR2	2383.75	2247.17	3534.58
Q9WUK5	Q9WUK5	INHBC_RAT	Inhbc	Inhibin beta C chain	1	AETLLEHDQR	AETLLEHDQR	3	AETLLEHDQR3	13658.4	19917.9	14679.7
D3ZZ81	A0A8I6AK94;D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	0	AETLPEVEAELAQR	AETLPEVEAELAQR	2	AETLPEVEAELAQR2	56390	56719.7	41184.6
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	AETNMAFSPFSIASLLTQVLLGAGDSTK	AETNMAFSPFSIASLLTQVLLGAGDSTK	3	AETNMAFSPFSIASLLTQVLLGAGDSTK3	432929	67250.9	29367.4
Q63525	Q63525	NUDC_RAT	Nudc	Nuclear migration protein nudC	1	AETPGPQIK	AETPGPQIK	2	AETPGPQIK2	60585.6	52676.4	55798.8
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	AETSLGIPSPTEISAEVK	AETSLGIPSPTEISAEVK	2	AETSLGIPSPTEISAEVK2	51349.6	49049.4	50521.1
P20760	P20759;P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	0	AETTAPSVYPLAPGTALK	AETTAPSVYPLAPGTALK	2	AETTAPSVYPLAPGTALK2	1865.13	2533.67	
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	AETVAAPVTVR	AETVAAPVTVR	2	AETVAAPVTVR2	51520	50334	56023.8
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	AETVQAALEEAQR	AETVQAALEEAQR	2	AETVQAALEEAQR2	2055.04	3716.24	2634.22
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	AEVAAEAAHR	AEVAAEAAHR	2	AEVAAEAAHR2			15844.9
Q99MI7	Q99MI7	UBA3_RAT	Uba3	NEDD8-activating enzyme E1 catalytic subunit	1	AEVAAEFLNDR	AEVAAEFLNDR	2	AEVAAEFLNDR2	5986.63	3578.89	3757.48
D4A584	D4A584	D4A584_RAT	Fes	Tyrosine-protein kinase	1	AEVAELLTHSGDFLVR	AEVAELLTHSGDFLVR	3	AEVAELLTHSGDFLVR3	8079.14		3619.53
A0A8I5YC74	A0A8I5YC74	A0A8I5YC74_RAT	ENSRNOG00000066004	Tropomyosin	1	AEVAESR	AEVAESR	2	AEVAESR2			280225
A0A8I5ZVX1	A0A8I5ZVX1	A0A8I5ZVX1_RAT	Ppfibp2	PPFIA binding protein 2	1	AEVAQLQEQVALK	AEVAQLQEQVALK	2	AEVAQLQEQVALK2	5491.52	2177.39	3396.99
A0A8I5ZVX1	A0A8I5ZVX1	A0A8I5ZVX1_RAT	Ppfibp2	PPFIA binding protein 2	1	AEVAQLQEQVALK	AEVAQLQEQVALK	3	AEVAQLQEQVALK3		6474.36	
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	AEVASAVCLR	AEVASAVC(UniMod:4)LR	2	AEVASAVC(UniMod:4)LR2	6644.34	8670.02	3975.26
Q9Z272	Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	1	AEVCADCSAPDPGWASISR	AEVC(UniMod:4)ADC(UniMod:4)SAPDPGWASISR	3	AEVC(UniMod:4)ADC(UniMod:4)SAPDPGWASISR3	3224.3	4929.11	8932.72
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	AEVDDVIQVR	AEVDDVIQVR	2	AEVDDVIQVR2	130030	173134	108086
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	AEVDDVIQVR	AEVDDVIQVR	3	AEVDDVIQVR3	70582.8	82648.7	82677.3
A0A8I5ZUD8	A0A8I5ZUD8	A0A8I5ZUD8_RAT	Slc30a9	Proton-coupled zinc antiporter SLC30A9, mitochondrial	1	AEVDFDGR	AEVDFDGR	2	AEVDFDGR2	9128.07	10857.6	14784
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	AEVDMDTDAPQVSHK	AEVDMDTDAPQVSHK	3	AEVDMDTDAPQVSHK3	9240.67	11827.9	12634.3
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	AEVDMDTDAPQVSHKPGGEPK	AEVDMDTDAPQVSHKPGGEPK	3	AEVDMDTDAPQVSHKPGGEPK3	63982.7	39592	51734.2
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	AEVDMDTDAPQVSHKPGGEPK	AEVDMDTDAPQVSHKPGGEPK	4	AEVDMDTDAPQVSHKPGGEPK4	107848	128405	106038
F1LXF5	F1LXF5	F1LXF5_RAT	Get4	Guided entry of tail-anchored proteins factor 4	1	AEVDVADELLENLAK	AEVDVADELLENLAK	2	AEVDVADELLENLAK2	17617.2	15578	25616
F1LXF5	F1LXF5	F1LXF5_RAT	Get4	Guided entry of tail-anchored proteins factor 4	1	AEVDVADELLENLAK	AEVDVADELLENLAK	3	AEVDVADELLENLAK3	5975.27	8548.31	7614.58
A0A096MJ11	A0A096MJ11	A0A096MJ11_RAT	Gsdmd	Gasdermin D	1	AEVEAGSSELR	AEVEAGSSELR	2	AEVEAGSSELR2	32386.5	29844.8	23416.3
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	AEVEDNIVVTFR	AEVEDNIVVTFR	2	AEVEDNIVVTFR2	33996.7	44315.1	19596.4
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	AEVEENQK	AEVEENQK	1	AEVEENQK1			3927.92
D4A9N5	D4A9N5	D4A9N5_RAT	Trim25	Tripartite motif-containing 25	1	AEVELILAK	AEVELILAK	2	AEVELILAK2	13459.5	6554.74	9750.32
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	AEVGILTR	AEVGILTR	2	AEVGILTR2	147902	274440	175692
D4A4H5	D4A4H5	D4A4H5_RAT	Sdf2	Stromal cell derived factor 2	1	AEVHHAEL	AEVHHAEL	2	AEVHHAEL2	9521.95		
P63144	P63144	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	1	AEVILGSIIK	AEVILGSIIK	2	AEVILGSIIK2	81503.6	53376	64195.4
P63144	P63144	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	1	AEVILGSIIKK	AEVILGSIIKK	3	AEVILGSIIKK3	15660.9	10846.2	20540.5
E9PT66	E9PT66	E9PT66_RAT	Sf3b3	Splicing factor 3b, subunit 3	1	AEVIMNYHVGETVLSLQK	AEVIMNYHVGETVLSLQK	3	AEVIMNYHVGETVLSLQK3		16711.2	
P20788	P20788	UCRI_RAT	Uqcrfs1	Cytochrome b-c1 complex subunit Rieske, mitochondrial	1	AEVLDSTK	AEVLDSTK	2	AEVLDSTK2	182437	184233	186756
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	AEVLMGAQR	AEVLMGAQR	2	AEVLMGAQR2	6669.48	5592.59	8246.82
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	AEVLQAFK	AEVLQAFK	2	AEVLQAFK2	22292.4	17135.2	30777.8
A0A8I6G6W8	A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	AEVLQSTQR	AEVLQSTQR	2	AEVLQSTQR2	7149.32	4460.04	8567.95
Q6P7P5	Q6P7P5	5MP2_RAT	Bzw1	eIF5-mimic protein 2	1	AEVLSEEPILK	AEVLSEEPILK	2	AEVLSEEPILK2	44550.2	37804.3	28849.7
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	AEVMLGHGLFSLLAER	AEVMLGHGLFSLLAER	3	AEVMLGHGLFSLLAER3	5879.64		
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	AEVQHQLHVAVGSLQESILAQVQR	AEVQHQLHVAVGSLQESILAQVQR	3	AEVQHQLHVAVGSLQESILAQVQR3	4821.21	3262.88	5855.15
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	AEVQHQLHVAVGSLQESILAQVQR	AEVQHQLHVAVGSLQESILAQVQR	4	AEVQHQLHVAVGSLQESILAQVQR4	14197.4	11179	18846.8
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	AEVSELK	AEVSELK	1	AEVSELK1	331313	304567	318587
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	AEVSELK	AEVSELK	2	AEVSELK2	1.74931e+07	1.66323e+07	1.93659e+07
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	AEVSELPSVVR	AEVSELPSVVR	2	AEVSELPSVVR2	80501.2	77180.8	69664.1
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	AEVSIQNNK	AEVSIQNNK	2	AEVSIQNNK2	7602.52	12777.6	7717.03
Q5U300	Q5U300;A0A8I5ZVX0;A0A8I6A544	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	0	AEVSQPR	AEVSQPR	2	AEVSQPR2			25593
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	AEVTDEK	AEVTDEK	2	AEVTDEK2			110218
Q9ES54	Q9ES54	NPL4_RAT	Nploc4	Nuclear protein localization protein 4 homolog	1	AEVVDEIASK	AEVVDEIASK	2	AEVVDEIASK2	41831	21263.5	37868
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	AEVVGAVR	AEVVGAVR	2	AEVVGAVR2	239184	280710	279901
P62483	P62483	KCAB2_RAT	Kcnab2	Voltage-gated potassium channel subunit beta-2	1	AEVVLGNIIK	AEVVLGNIIK	2	AEVVLGNIIK2	28809.8	24279.5	26147.3
P62483	P62483	KCAB2_RAT	Kcnab2	Voltage-gated potassium channel subunit beta-2	1	AEVVLGNIIKK	AEVVLGNIIKK	3	AEVVLGNIIKK3	2563.49	3107.87	7260.42
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	AEVVNGYEAK	AEVVNGYEAK	2	AEVVNGYEAK2	28228	24278.4	28128.8
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	AEVWQLLAGCHDNQAMLDK	AEVWQLLAGC(UniMod:4)HDNQAMLDK	3	AEVWQLLAGC(UniMod:4)HDNQAMLDK3	6284.68	5617.36	2754.95
B1WBN7	B1WBN7	B1WBN7_RAT	Fam20c	FAM20C	1	AEWEVDPDYCEEVK	AEWEVDPDYC(UniMod:4)EEVK	2	AEWEVDPDYC(UniMod:4)EEVK2	47729.4	42572.9	45697.6
D3ZYF5	D3ZYF5	D3ZYF5_RAT	Trim58	Tripartite motif-containing 58	1	AEWGLGVCQDSVLR	AEWGLGVC(UniMod:4)QDSVLR	2	AEWGLGVC(UniMod:4)QDSVLR2	8194.86	10148.8	4074.79
Q8K4Y7	Q8K4Y7	CANT1_RAT	Cant1	Soluble calcium-activated nucleotidase 1	1	AEWLAVK	AEWLAVK	2	AEWLAVK2	5996.6	13487.1	13797.7
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	AEWPSETPVLCQQCGGR	AEWPSETPVLC(UniMod:4)QQC(UniMod:4)GGR	3	AEWPSETPVLC(UniMod:4)QQC(UniMod:4)GGR3	33886.2	28480.1	17288.3
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	AEWPSETPVLCQQCGGRPGVTFTSAK	AEWPSETPVLC(UniMod:4)QQC(UniMod:4)GGRPGVTFTSAK	3	AEWPSETPVLC(UniMod:4)QQC(UniMod:4)GGRPGVTFTSAK3	450106	499017	513807
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	AEWPSETPVLCQQCGGRPGVTFTSAK	AEWPSETPVLC(UniMod:4)QQC(UniMod:4)GGRPGVTFTSAK	4	AEWPSETPVLC(UniMod:4)QQC(UniMod:4)GGRPGVTFTSAK4	15013.3	13938.9	20644.4
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	AEWSHAR	AEWSHAR	2	AEWSHAR2	14560.9	12392.1	12854.9
Q32KK2	Q32KK2	Q32KK2_RAT	Arsa	Arylsulfatase A	1	AEYDAAMTFSPSQIAK	AEYDAAMTFSPSQIAK	2	AEYDAAMTFSPSQIAK2	7483.8	4829.74	7229.5
P51583	P51583;A0A0G2K5S4	PUR6_RAT	Paics	Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase	0	AEYEGDGIPTVFVAVAGR	AEYEGDGIPTVFVAVAGR	2	AEYEGDGIPTVFVAVAGR2	54788.4	53327.9	42234.7
P51583	P51583;A0A0G2K5S4	PUR6_RAT	Paics	Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase	0	AEYEGDGIPTVFVAVAGR	AEYEGDGIPTVFVAVAGR	3	AEYEGDGIPTVFVAVAGR3	10636.7	10294.3	9326.85
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	AEYLALIFER	AEYLALIFER	2	AEYLALIFER2	29217.9	20802.6	21082.7
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	AEYLCQIGDK	AEYLC(UniMod:4)QIGDK	2	AEYLC(UniMod:4)QIGDK2	66736.1	73183.1	61026.4
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	AEYLCQIGDKEGALTAFR	AEYLC(UniMod:4)QIGDKEGALTAFR	3	AEYLC(UniMod:4)QIGDKEGALTAFR3	60677.5	59131.2	42628.4
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	AEYLGSCLLHK	AEYLGSC(UniMod:4)LLHK	2	AEYLGSC(UniMod:4)LLHK2	21765.2	26006.8	26324.1
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	AEYLGSCLLHK	AEYLGSC(UniMod:4)LLHK	3	AEYLGSC(UniMod:4)LLHK3	107752	126353	114380
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	AEYLNNR	AEYLNNR	2	AEYLNNR2	1.42534e+06	1.32817e+06	1.24093e+06
D3ZYL0	D3ZYL0	D3ZYL0_RAT	Ripk1	Receptor interacting serine/threonine kinase 1	1	AEYNEALLEEGK	AEYNEALLEEGK	2	AEYNEALLEEGK2	1062.45		4772.85
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	AEYPFSSEQK	AEYPFSSEQK	2	AEYPFSSEQK2	38635.8	39048.8	30626.1
A0A0G2K975	A0A0G2K975	A0A0G2K975_RAT	Cfhr4	Similar to complement factor H-related protein	1	AEYSHGDVVEYDCKPR	AEYSHGDVVEYDC(UniMod:4)KPR	3	AEYSHGDVVEYDC(UniMod:4)KPR3	2033.9		2155.56
A0A0G2K975	A0A0G2K975	A0A0G2K975_RAT	Cfhr4	Similar to complement factor H-related protein	1	AEYSHGDVVEYDCKPR	AEYSHGDVVEYDC(UniMod:4)KPR	4	AEYSHGDVVEYDC(UniMod:4)KPR4	4016.09	6410.38	5191.43
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	AEYSPCR	AEYSPC(UniMod:4)R	2	AEYSPC(UniMod:4)R2		7.9326e+06	9.78868e+06
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	AEYSPCRSNTMSSVYSQGFSGDK	AEYSPC(UniMod:4)RSNTMSSVYSQGFSGDK	3	AEYSPC(UniMod:4)RSNTMSSVYSQGFSGDK3	16196.2	12496	4731.61
F7ELE5	F7ELE5	F7ELE5_RAT	Ndufs7	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial	1	AEYVVTK	AEYVVTK	2	AEYVVTK2	70028.5	61051.3	77878
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	AFAADTGMNR	AFAADTGMNR	2	AFAADTGMNR2	11578.1	16221.4	14345.6
P14604	P14604	ECHM_RAT	Echs1	Enoyl-CoA hydratase, mitochondrial	1	AFAAGADIK	AFAAGADIK	2	AFAAGADIK2	75380.5	67514.5	68851.1
D3ZIK1	D3ZIK1	D3ZIK1_RAT	Lin28b	Lin-28 homolog B	1	AFAAIGEQNK	AFAAIGEQNK	2	AFAAIGEQNK2	600750	411160	386025
Q5PQK5	Q5PQK5	Q5PQK5_RAT	Rdx	Radixin	1	AFAAQEDLEK	AFAAQEDLEK	2	AFAAQEDLEK2	24787.3	17620.3	14354.2
D3ZBT4	D3ZBT4	D3ZBT4_RAT	Mtf1	Metal-regulatory transcription factor 1	1	AFAASHHLK	AFAASHHLK	2	AFAASHHLK2			16649.4
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	AFADALEVIPMALSENSGMNPIQTMTEVR	AFADALEVIPMALSENSGMNPIQTMTEVR	4	AFADALEVIPMALSENSGMNPIQTMTEVR4	3725.46	9497.96	
A0A0G2KAU4	A0A0G2KAU4	A0A0G2KAU4_RAT	Rasgrp3	RAS guanyl releasing protein 3	1	AFADCDGFK	AFADC(UniMod:4)DGFK	2	AFADC(UniMod:4)DGFK2		8927.97	
A0A8I6AAR9	A0A0G2K916;A0A8I6AAR9	A0A8I6AAR9_RAT	Ankrd17	Ankyrin repeat domain 17	0	AFADPEVLR	AFADPEVLR	2	AFADPEVLR2	12613.2	11018	6035.95
Q6TUD3	Q6TUD3	Q6TUD3_RAT	Rdh11	LRRGT00111	1	AFAEGFLAEEK	AFAEGFLAEEK	2	AFAEGFLAEEK2	51156.7	47397.7	54714.7
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	AFAELWAFDAAQGK	AFAELWAFDAAQGK	2	AFAELWAFDAAQGK2	439471	1.65811e+08	1.76275e+08
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	AFAELWAFDAAQGK	AFAELWAFDAAQGK	3	AFAELWAFDAAQGK3	2.66455e+07	50350.9	2.80954e+07
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	AFAELWAFDAAQGKCIQFIYGGCK	AFAELWAFDAAQGKC(UniMod:4)IQFIYGGC(UniMod:4)K	3	AFAELWAFDAAQGKC(UniMod:4)IQFIYGGC(UniMod:4)K3	43865.3	36892.9	51110.3
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	AFAELWAFDAAQGKCIQFIYGGCKGNGNK	AFAELWAFDAAQGKC(UniMod:4)IQFIYGGC(UniMod:4)KGNGNK	4	AFAELWAFDAAQGKC(UniMod:4)IQFIYGGC(UniMod:4)KGNGNK4	28072	18705.6	18720.6
A0A8I6GLU8	A0A8I6GLU8	A0A8I6GLU8_RAT	Tardbp	TAR DNA-binding protein 43	1	AFAFVTFADDK	AFAFVTFADDK	2	AFAFVTFADDK2	31635.6	25924.7	19813.6
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	AFAHITGGGLLENIPR	AFAHITGGGLLENIPR	3	AFAHITGGGLLENIPR3	13039.9	8800.89	19973.1
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	AFAIDSSHPWLHECMIR	AFAIDSSHPWLHEC(UniMod:4)MIR	3	AFAIDSSHPWLHEC(UniMod:4)MIR3	9268.67	4926.29	7042.94
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	AFAIDSSHPWLHECMIR	AFAIDSSHPWLHEC(UniMod:4)MIR	4	AFAIDSSHPWLHEC(UniMod:4)MIR4	7447.77	5368.37	8291.25
D4A830	D4A830	D4A830_RAT	Ppa2	inorganic diphosphatase	1	AFALEVINSAHEHWK	AFALEVINSAHEHWK	4	AFALEVINSAHEHWK4	16123.8	19830.7	16104.7
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	AFALGILK	AFALGILK	2	AFALGILK2	13026.8	22966.2	15416.1
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	AFALYSEEEGVLR	AFALYSEEEGVLR	2	AFALYSEEEGVLR2	16476.4	13975.5	19311.1
A0A8I6AH91	Q6AYU2;A0A8I6AH91	A0A8I6AH91_RAT	Pcbp1	Poly(rC) binding protein 1	0	AFAMIIDK	AFAMIIDK	2	AFAMIIDK2	185768	169692	171771
Q9WV75	Q9WV75	SPON2_RAT	Spon2	Spondin-2	1	AFAPPSLDLASR	AFAPPSLDLASR	2	AFAPPSLDLASR2	33642.7	27839.9	20273.8
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	AFAQAQSYIYIEK	AFAQAQSYIYIEK	2	AFAQAQSYIYIEK2	1.41847e+06	1.20458e+06	1.27157e+06
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	AFAQAQSYIYIEK	AFAQAQSYIYIEK	3	AFAQAQSYIYIEK3	131239	105229	94424.3
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	AFAQAQSYIYIEKTHITNAFNWLSMK	AFAQAQSYIYIEKTHITNAFNWLSMK	4	AFAQAQSYIYIEKTHITNAFNWLSMK4	13931.2	3395.1	2553.13
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	AFAVGVQQVLLK	AFAVGVQQVLLK	2	AFAVGVQQVLLK2	85659.3	105600	90114.3
P50282	P50282	MMP9_RAT	Mmp9	Matrix metalloproteinase-9	1	AFAVWSAVTPLTFTR	AFAVWSAVTPLTFTR	2	AFAVWSAVTPLTFTR2	11916	16911.8	12267.4
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	AFAYLQVPER	AFAYLQVPER	2	AFAYLQVPER2	27138.7	31045.3	27161.8
F1M471	F1M471	F1M471_RAT	Epm2aip1	EPM2A interacting protein 1	1	AFAYLTR	AFAYLTR	2	AFAYLTR2	38871.1		19181.7
Q5FVC7	Q5FVC7	ACAP2_RAT	Acap2	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2	1	AFCAANK	AFC(UniMod:4)AANK	2	AFC(UniMod:4)AANK2	16472.5	19102.8	
P29066	P29066	ARRB1_RAT	Arrb1	Beta-arrestin-1	1	AFCAENLEEK	AFC(UniMod:4)AENLEEK	2	AFC(UniMod:4)AENLEEK2	87751.3	75152.7	73039
Q5M9G8	Q5M9G8	DCA11_RAT	Dcaf11	DDB1- and CUL4-associated factor 11	1	AFCGIYSK	AFC(UniMod:4)GIYSK	2	AFC(UniMod:4)GIYSK2	19394.5	16580.5	14345.5
Q4V887	Q4V887	S39A6_RAT	Slc39a6	Zinc transporter ZIP6	1	AFCPDLDSDNSGKNPNTSQGK	AFC(UniMod:4)PDLDSDNSGKNPNTSQGK	3	AFC(UniMod:4)PDLDSDNSGKNPNTSQGK3	5656.22	3757.65	1302.39
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	AFCTGQELQLVQLEGGGGSGTYR	AFC(UniMod:4)TGQELQLVQLEGGGGSGTYR	3	AFC(UniMod:4)TGQELQLVQLEGGGGSGTYR3	8298.13	9749.05	5653.31
D3ZSN4	D3ZSN4	D3ZSN4_RAT	Zfp330	Zinc finger protein 330	1	AFCYFCNSVQK	AFC(UniMod:4)YFC(UniMod:4)NSVQK	2	AFC(UniMod:4)YFC(UniMod:4)NSVQK2	10414.1	19003.7	18375.7
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	AFDCPETEYPAK	AFDC(UniMod:4)PETEYPAK	2	AFDC(UniMod:4)PETEYPAK2	29493.9	19608.2	28132.3
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	AFDFLSEETEASLASR	AFDFLSEETEASLASR	2	AFDFLSEETEASLASR2	18367.5	9681.5	23385.4
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	AFDITYVR	AFDITYVR	2	AFDITYVR2	367347	409771	383064
P12711	P12711	ADHX_RAT	Adh5	Alcohol dehydrogenase class-3	1	AFDLMHSGNSIR	AFDLMHSGNSIR	3	AFDLMHSGNSIR3	26976.1	32477.7	49252
A0A8I6A282	A0A8I6A282	A0A8I6A282_RAT	Antxr2	Anthrax toxin receptor	1	AFDLYFVLDK	AFDLYFVLDK	2	AFDLYFVLDK2	25949.5	19785.4	14092.5
Q9Z254	Q9Z254	GIPC1_RAT	Gipc1	PDZ domain-containing protein GIPC1	1	AFDMISQR	AFDMISQR	2	AFDMISQR2	20405.6	16459.6	19198
A0A8I5ZRV3	A0A8I5ZRV3	A0A8I5ZRV3_RAT	Fam3a	FAM3 metabolism regulating signaling molecule A	1	AFDMWAGDVNDLLK	AFDMWAGDVNDLLK	2	AFDMWAGDVNDLLK2	13844	16987.2	25096.8
P07633	P07633	PCCB_RAT	Pccb	Propionyl-CoA carboxylase beta chain, mitochondrial	1	AFDNDVDALCNLR	AFDNDVDALC(UniMod:4)NLR	2	AFDNDVDALC(UniMod:4)NLR2	20878.2	22594.8	17088.8
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	AFDNIINK	AFDNIINK	2	AFDNIINK2	90630.8	88096.5	81762
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	AFDNIINKDHK	AFDNIINKDHK	3	AFDNIINKDHK3	9676.9	5940.77	14282.4
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	AFDNQCQILLTTR	AFDNQC(UniMod:4)QILLTTR	2	AFDNQC(UniMod:4)QILLTTR2	3488.19	4805.22	1124.19
B2RYX1	B2RYX1	B2RYX1_RAT	Uqcr10	Complex III subunit 9	1	AFDQGADAVYDYINEGK	AFDQGADAVYDYINEGK	2	AFDQGADAVYDYINEGK2	23353	19564.4	14783.5
B2RYX1	B2RYX1	B2RYX1_RAT	Uqcr10	Complex III subunit 9	1	AFDQGADAVYDYINEGK	AFDQGADAVYDYINEGK	3	AFDQGADAVYDYINEGK3	16380.7	18806	15618.8
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	AFDSAVAK	AFDSAVAK	2	AFDSAVAK2	41483.9	31221	45912.6
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	AFDSGIIPMEFVNK	AFDSGIIPMEFVNK	2	AFDSGIIPMEFVNK2	32146.2	30699.3	46941
P70531	P70531	EF2K_RAT	Eef2k	Eukaryotic elongation factor 2 kinase	1	AFDTGLNLSPDR	AFDTGLNLSPDR	2	AFDTGLNLSPDR2		2769.04	1691.01
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	AFDVEPSLHSGINAAVLLIAAGK	AFDVEPSLHSGINAAVLLIAAGK	3	AFDVEPSLHSGINAAVLLIAAGK3	5087.69	785.217	2675.3
D3Z9B0	D3Z9B0	D3Z9B0_RAT	Glod5	Glyoxalase domain containing 5	1	AFDVPIEEGPVSR	AFDVPIEEGPVSR	2	AFDVPIEEGPVSR2	17283.1	9612.13	13471.1
Q80Z70	Q80Z70	SE1L1_RAT	Sel1l	Protein sel-1 homolog 1	1	AFDYFNLAANAGNSHAMAFLGK	AFDYFNLAANAGNSHAMAFLGK	3	AFDYFNLAANAGNSHAMAFLGK3	3840.55	3952.7	3483.38
Q99MM4	Q99MM4	TRAD1_RAT	Trafd1	TRAF-type zinc finger domain-containing protein 1	1	AFEADPFYSR	AFEADPFYSR	2	AFEADPFYSR2	12440.5	11337	3457.07
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	AFEAIESAQSAR	AFEAIESAQSAR	2	AFEAIESAQSAR2	16722.9	11894.5	19874.2
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	AFEDELR	AFEDELR	2	AFEDELR2	126534	138060	126699
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	AFEDEMSGR	AFEDEMSGR	2	AFEDEMSGR2	595939	723116	706927
Q62848	Q62848	ARFG1_RAT	Arfgap1	ADP-ribosylation factor GTPase-activating protein 1	1	AFEDWLNDDLGSYQGAQENR	AFEDWLNDDLGSYQGAQENR	3	AFEDWLNDDLGSYQGAQENR3	14731.5	14882.3	24919.3
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	AFEEAEK	AFEEAEK	1	AFEEAEK1	17362.5	26869.5	29065.3
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	AFEEAEK	AFEEAEK	2	AFEEAEK2	1.53495e+06	1.64022e+06	1.82525e+06
F1M171	F1M171	F1M171_RAT	Leg1	Similar to RIKEN cDNA 2310057J18	1	AFEEFLGTSP	AFEEFLGTSP	2	AFEEFLGTSP2	16356.7	15126.3	21743
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	AFEENEVPANSGK	AFEENEVPANSGK	2	AFEENEVPANSGK2	20695.8	24628.4	31187.2
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	AFEEQER	AFEEQER	2	AFEEQER2	76304.6	67144.5	66687.6
P18422	P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	1	AFELELSWVGELTK	AFELELSWVGELTK	2	AFELELSWVGELTK2	126601	122968	113926
P18422	P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	1	AFELELSWVGELTK	AFELELSWVGELTK	3	AFELELSWVGELTK3	14310.7	14157.8	12799.6
P51886	P51886	LUM_RAT	Lum	Lumican	1	AFENVTDLQWLILDHNLLENSK	AFENVTDLQWLILDHNLLENSK	3	AFENVTDLQWLILDHNLLENSK3	21354.3	35324.4	30369.6
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	AFEPATGR	AFEPATGR	2	AFEPATGR2	284171	242913	257845
D3ZME7	D3ZME7	D3ZME7_RAT	Hscb	HscB mitochondrial iron-sulfur cluster co-chaperone	1	AFEQGDFEK	AFEQGDFEK	2	AFEQGDFEK2	8370.91	5984.17	5670.92
Q8VIL3	Q8VIL3	ZWINT_RAT	Zwint	ZW10 interactor	1	AFEQLEAK	AFEQLEAK	1	AFEQLEAK1	759.494		1357.6
Q8VIL3	Q8VIL3	ZWINT_RAT	Zwint	ZW10 interactor	1	AFEQLEAK	AFEQLEAK	2	AFEQLEAK2	37363.4	38678.9	50481.1
D4AAY4	D4AAY4	D4AAY4_RAT	Tbc1d7	TBC1 domain family member 7	1	AFEQYLNLEDSR	AFEQYLNLEDSR	2	AFEQYLNLEDSR2		3226.15	3963.93
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	AFESTLK	AFESTLK	2	AFESTLK2	141160	181359	169017
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	AFETLLGQALTK	AFETLLGQALTK	2	AFETLLGQALTK2	2324.88	809.883	2394.27
Q6AXM6	Q6AXM6	Q6AXM6_RAT	Icam2	Intercellular adhesion molecule 2	1	AFEVYIR	AFEVYIR	2	AFEVYIR2	64385.5	54281.8	39602.1
P28840	P28840	NEC1_RAT	Pcsk1	Neuroendocrine convertase 1	1	AFEYGVK	AFEYGVK	2	AFEYGVK2	11284.8		11520.6
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	AFFADIPVPR	AFFADIPVPR	2	AFFADIPVPR2	16699.3	25297.8	23710
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	AFFAEVVSEGVPLLLALVPHR	AFFAEVVSEGVPLLLALVPHR	3	AFFAEVVSEGVPLLLALVPHR3	2964.03	5951.9	25406.3
P80385	P80385	AAKG1_RAT	Prkag1	5'-AMP-activated protein kinase subunit gamma-1	1	AFFALVTNGVR	AFFALVTNGVR	2	AFFALVTNGVR2	18396.4	18414.1	13413.5
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	AFFESHPAPSAER	AFFESHPAPSAER	3	AFFESHPAPSAER3	68646.6	55883.1	38661.9
A0A8I5ZXL6	A0A8I5ZXL6	A0A8I5ZXL6_RAT	Plekha7	Pleckstrin homology domain containing A7	1	AFFFQEK	AFFFQEK	2	AFFFQEK2	5869.69	7978.59	7601.77
P97523	P97523	MET_RAT	Met	Hepatocyte growth factor receptor	1	AFFLLDGILSK	AFFLLDGILSK	2	AFFLLDGILSK2	2231.14	4614.52	3764.07
Q6AYD3	Q6AYD3	PA2G4_RAT	Pa2g4	Proliferation-associated protein 2G4	1	AFFSEVER	AFFSEVER	2	AFFSEVER2	71752.6	65970.8	75608.1
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	AFFSGSQR	AFFSGSQR	2	AFFSGSQR2	1.13398e+06	1.17204e+06	1.28055e+06
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	AFFSPFR	AFFSPFR	2	AFFSPFR2	98934.8	81488	79975.7
Q9Z244	Q9Z244	GMPR1_RAT	Gmpr	GMP reductase 1	1	AFGAGADFVMLGGMFSGHTECAGEVIER	AFGAGADFVMLGGMFSGHTEC(UniMod:4)AGEVIER	3	AFGAGADFVMLGGMFSGHTEC(UniMod:4)AGEVIER3	46924.7	12386.8	68909
Q9ES54	Q9ES54	NPL4_RAT	Nploc4	Nuclear protein localization protein 4 homolog	1	AFGAPHVVEDEIDQYLSK	AFGAPHVVEDEIDQYLSK	3	AFGAPHVVEDEIDQYLSK3	34762.3	21706.1	15968.2
Q05695	Q05695	L1CAM_RAT	L1cam	Neural cell adhesion molecule L1	1	AFGAPVPSVQWLDEEGTTVLQDER	AFGAPVPSVQWLDEEGTTVLQDER	3	AFGAPVPSVQWLDEEGTTVLQDER3	3042.49	2445.4	6468.5
Q9EP80	Q9EP80	PICK1_RAT	Pick1	PRKCA-binding protein	1	AFGDVFSVIGVR	AFGDVFSVIGVR	2	AFGDVFSVIGVR2	7207.96	10331.8	12463.3
Q9Z1L0	Q9Z1L0	PK3CB_RAT	Pik3cb	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform	1	AFGEDAVGVIFK	AFGEDAVGVIFK	2	AFGEDAVGVIFK2	7510.49	12388.6	12781.1
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	AFGELCPDSAPLPQLVSEALR	AFGELC(UniMod:4)PDSAPLPQLVSEALR	3	AFGELC(UniMod:4)PDSAPLPQLVSEALR3	68697.5	60377.1	67390.2
Q9JHW5	Q9JHW5	VAMP7_RAT	Vamp7	Vesicle-associated membrane protein 7	1	AFGFLNEVK	AFGFLNEVK	2	AFGFLNEVK2	261686	214233	270983
Q9JHW5	Q9JHW5	VAMP7_RAT	Vamp7	Vesicle-associated membrane protein 7	1	AFGFLNEVKK	AFGFLNEVKK	2	AFGFLNEVKK2	9650.62	13498.5	17094.7
Q9JHW5	Q9JHW5	VAMP7_RAT	Vamp7	Vesicle-associated membrane protein 7	1	AFGFLNEVKK	AFGFLNEVKK	3	AFGFLNEVKK3	92809.3	102098	102361
B2RYG6	B2RYG6	OTUB1_RAT	Otub1	Ubiquitin thioesterase OTUB1	1	AFGFSHLEALLDDSK	AFGFSHLEALLDDSK	2	AFGFSHLEALLDDSK2	6437.88	3906.99	8978.7
B2RYG6	B2RYG6	OTUB1_RAT	Otub1	Ubiquitin thioesterase OTUB1	1	AFGFSHLEALLDDSK	AFGFSHLEALLDDSK	3	AFGFSHLEALLDDSK3	72358.2	58997.2	46453.6
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	AFGGQSLK	AFGGQSLK	2	AFGGQSLK2	120405	100614	139792
P97532	P97532	THTM_RAT	Mpst	3-mercaptopyruvate sulfurtransferase	1	AFGHHSVSLLDGGFR	AFGHHSVSLLDGGFR	3	AFGHHSVSLLDGGFR3	13856.9	13433.7	16904.3
Q76LD0	Q76LD0	CRDL1_RAT	Chrdl1	Chordin-like protein 1	1	AFGIVECVLCTCNVTK	AFGIVEC(UniMod:4)VLC(UniMod:4)TC(UniMod:4)NVTK	2	AFGIVEC(UniMod:4)VLC(UniMod:4)TC(UniMod:4)NVTK2	41180.7	32632.1	42484.6
Q76LD0	Q76LD0	CRDL1_RAT	Chrdl1	Chordin-like protein 1	1	AFGIVECVLCTCNVTK	AFGIVEC(UniMod:4)VLC(UniMod:4)TC(UniMod:4)NVTK	3	AFGIVEC(UniMod:4)VLC(UniMod:4)TC(UniMod:4)NVTK3	8933.31	6138.94	8364.24
O08774	O08774	RGS12_RAT	Rgs12	Regulator of G-protein signaling 12	1	AFGMQNLFGPHR	AFGMQNLFGPHR	3	AFGMQNLFGPHR3	5327.27	10042.5	6928.72
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	AFGPGIEGK	AFGPGIEGK	2	AFGPGIEGK2	7703.22	8414.02	7730.37
D3ZHA0	D3ZHA0	FLNC_RAT	Flnc	Filamin-C	1	AFGPGLEGGLVNK	AFGPGLEGGLVNK	2	AFGPGLEGGLVNK2	3269.73		3475.29
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AFGPGLQGGNAGSPAR	AFGPGLQGGNAGSPAR	2	AFGPGLQGGNAGSPAR2	3.18744e+06	2.30283e+06	2.29654e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AFGPGLQGGNAGSPAR	AFGPGLQGGNAGSPAR	3	AFGPGLQGGNAGSPAR3	48999.4	51534	74206.7
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	AFGPLWCHEDITPK	AFGPLWC(UniMod:4)HEDITPK	3	AFGPLWC(UniMod:4)HEDITPK3	67167.2	107466	80746.1
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	AFGPTSPCAWNVCVTR	AFGPTSPC(UniMod:4)AWNVC(UniMod:4)VTR	2	AFGPTSPC(UniMod:4)AWNVC(UniMod:4)VTR2	13553.6	15619.1	18207.6
A0A8I6G6W8	A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	1	AFGSGIDIKPGTPPIGGR	AFGSGIDIKPGTPPIGGR	3	AFGSGIDIKPGTPPIGGR3	5721.67	7289.24	3976.71
A0A8I5ZK89	A0A8I5ZK89	A0A8I5ZK89_RAT	Dock5	Dedicator of cytokinesis 5	1	AFGVAFVK	AFGVAFVK	2	AFGVAFVK2	7327.63	6928.39	3055.8
Q568Z3	Q568Z3	Q568Z3_RAT	Paqr4	Progestin and adipoQ receptor family member 4	1	AFGWQAGAR	AFGWQAGAR	2	AFGWQAGAR2	23365.9	21891.7	18491.2
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	AFGWYPHLGR	AFGWYPHLGR	3	AFGWYPHLGR3	145241	134988	152520
A0A8I5ZSN8;A0A8I6A2P1	A0A8I5ZSN8;A0A8I6A2P1	A0A8I5ZSN8_RAT;A0A8I6A2P1_RAT	AABR07026797.1;Srsf3	RRM domain-containing protein	0	AFGYYGPLR	AFGYYGPLR	2	AFGYYGPLR2	15916.7	16918.2	16754
A1L108	A1L108	ARP5L_RAT	Arpc5l	Actin-related protein 2/3 complex subunit 5-like protein	1	AFHAALR	AFHAALR	2	AFHAALR2	25479.9	21032.5	26931.4
Q05030	Q05030	PGFRB_RAT	Pdgfrb	Platelet-derived growth factor receptor beta	1	AFHADDQVQLSFK	AFHADDQVQLSFK	3	AFHADDQVQLSFK3	7190.81	9554.52	13686.6
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	AFHDMGGVQLICNNMVTSTR	AFHDMGGVQLIC(UniMod:4)NNMVTSTR	3	AFHDMGGVQLIC(UniMod:4)NNMVTSTR3	6187.35	5647.33	3376.55
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	AFHGWNEFDISEDEPLWK	AFHGWNEFDISEDEPLWK	3	AFHGWNEFDISEDEPLWK3	14735.6	25074.7	11871.5
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	AFHHLLQTLNR	AFHHLLQTLNR	3	AFHHLLQTLNR3	5925.27	5603.67	10419.9
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	AFHHLLQTLNRPDSELQLNTGNGLFVNK	AFHHLLQTLNRPDSELQLNTGNGLFVNK	4	AFHHLLQTLNRPDSELQLNTGNGLFVNK4	2.26232e+06	2.08848e+06	2.15249e+06
Q5PPL3	Q5PPL3	NSDHL_RAT	Nsdhl	Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating	1	AFHITNDEPIPFWTFLSR	AFHITNDEPIPFWTFLSR	3	AFHITNDEPIPFWTFLSR3	24570.6	23797	23558.6
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	AFHNEAQVNPER	AFHNEAQVNPER	2	AFHNEAQVNPER2	28130	17483	14617.4
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	AFHNEAQVNPER	AFHNEAQVNPER	3	AFHNEAQVNPER3	319993	320703	308627
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	AFHNEAQVNPERK	AFHNEAQVNPERK	3	AFHNEAQVNPERK3	31023.5	25456	45108.4
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	AFHNEAQVNPERK	AFHNEAQVNPERK	4	AFHNEAQVNPERK4	62230.7	76040.1	92578.8
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	AFHPFIAGPYNR	AFHPFIAGPYNR	3	AFHPFIAGPYNR3	2905.58	8623.32	9205.03
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	AFHPTYEEK	AFHPTYEEK	2	AFHPTYEEK2	81917	63322.3	77124.9
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	AFHSAVAQR	AFHSAVAQR	2	AFHSAVAQR2		27613.8	
D4A2N2	D4A2N2	D4A2N2_RAT	Inpp5b	phosphoinositide 5-phosphatase	1	AFHTLYAHDQLK	AFHTLYAHDQLK	3	AFHTLYAHDQLK3	4377.66	7854.45	2477.85
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	AFHYECNNESDK	AFHYEC(UniMod:4)NNESDK	2	AFHYEC(UniMod:4)NNESDK2	32454.7	19604.4	27337.3
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	AFHYECNNESDK	AFHYEC(UniMod:4)NNESDK	3	AFHYEC(UniMod:4)NNESDK3	61793.5	105460	172901
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	AFHYECNNESDKR	AFHYEC(UniMod:4)NNESDKR	3	AFHYEC(UniMod:4)NNESDKR3	4834.64	5215.86	4809.52
P51111	P51111	HD_RAT	Htt	Huntingtin	1	AFIANLK	AFIANLK	2	AFIANLK2	104079	119902	54077.5
P14046	Q6IE52;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	AFIFIDESHITDAFTWLSK	AFIFIDESHITDAFTWLSK	3	AFIFIDESHITDAFTWLSK3	56111.9	73864.9	39860.8
P14046	Q6IE52;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	AFIFIDESHITDAFTWLSK	AFIFIDESHITDAFTWLSK	4	AFIFIDESHITDAFTWLSK4	80611.1	49478	54587.9
P14046	Q6IE52;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	AFIFIDESHITDAFTWLSKQQK	AFIFIDESHITDAFTWLSKQQK	3	AFIFIDESHITDAFTWLSKQQK3	5474.14	2794.92	4874.39
P14046	Q6IE52;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	AFIFIDESHITDAFTWLSKQQK	AFIFIDESHITDAFTWLSKQQK	4	AFIFIDESHITDAFTWLSKQQK4	12050.7	16200.4	19171.6
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	AFIHHELLAYLYSSADQSSLMEESAEQAQR	AFIHHELLAYLYSSADQSSLMEESAEQAQR	4	AFIHHELLAYLYSSADQSSLMEESAEQAQR4	10342.2	11690.8	15508
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	AFIHWVSQPLVCEIR	AFIHWVSQPLVC(UniMod:4)EIR	2	AFIHWVSQPLVC(UniMod:4)EIR2	2422.52	3246.51	1635.86
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	AFIHWVSQPLVCEIR	AFIHWVSQPLVC(UniMod:4)EIR	3	AFIHWVSQPLVC(UniMod:4)EIR3	66670.4	75033.9	52476.7
F7FFW7	F7FFW7	F7FFW7_RAT	Atp6v0d1	ATPase H+ transporting V0 subunit D1	1	AFIITINSFGTELSK	AFIITINSFGTELSK	2	AFIITINSFGTELSK2	23624.1	7555.81	8359.86
Q6UPR8	Q6UPR8	ERMP1_RAT	Ermp1	Endoplasmic reticulum metallopeptidase 1	1	AFINLEAAGVGGK	AFINLEAAGVGGK	2	AFINLEAAGVGGK2	12993.7		7419.68
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	AFIPQLLSR	AFIPQLLSR	2	AFIPQLLSR2	62745.2	56777	49528.1
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	AFISNVK	AFISNVK	2	AFISNVK2	229796	256531	240823
Q62826	A0A0G2JVD4;Q62826	HNRPM_RAT	Hnrnpm	Heterogeneous nuclear ribonucleoprotein M	0	AFITNIPFDVK	AFITNIPFDVK	2	AFITNIPFDVK2	4073.72		
Q62826	A0A0G2JVD4;Q62826	HNRPM_RAT	Hnrnpm	Heterogeneous nuclear ribonucleoprotein M	0	AFITNIPFDVKWQSLK	AFITNIPFDVKWQSLK	2	AFITNIPFDVKWQSLK2	12983.6	24041.2	
Q63635	Q63635	STX6_RAT	Stx6	Syntaxin-6	1	AFITSTR	AFITSTR	2	AFITSTR2	28375.1	20809.1	31199.3
P0C8E4	P0C8E4	M3K7_RAT	Map3k7	Mitogen-activated protein kinase kinase kinase 7	1	AFIVELR	AFIVELR	2	AFIVELR2	30675.3	26013.5	23698.9
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	AFLACMR	AFLAC(UniMod:4)MR	2	AFLAC(UniMod:4)MR2	125028	168296	138733
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	AFLAELEQNSPK	AFLAELEQNSPK	2	AFLAELEQNSPK2	51521.1	48730	63411.7
P97535	P97535	PLA1A_RAT	Pla1a	Phospholipase A1 member A	1	AFLAGDCLDCFNPFLLSCPR	AFLAGDC(UniMod:4)LDC(UniMod:4)FNPFLLSC(UniMod:4)PR	3	AFLAGDC(UniMod:4)LDC(UniMod:4)FNPFLLSC(UniMod:4)PR3	55505	44817.4	62130.7
D3ZQC1	D3ZQC1	D3ZQC1_RAT	B3galt6	Hexosyltransferase	1	AFLAVLVASAPR	AFLAVLVASAPR	2	AFLAVLVASAPR2	6927.93	6441.97	6957.75
B5DFL6	B5DFL6	B5DFL6_RAT	Cmtm3	CKLF-like MARVEL transmembrane domain containing 3	1	AFLCSLK	AFLC(UniMod:4)SLK	2	AFLC(UniMod:4)SLK2	52369.3	51858.5	68072.4
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	AFLDFYHSFLEK	AFLDFYHSFLEK	2	AFLDFYHSFLEK2	9967.67	4015.08	9425.49
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	AFLDFYHSFLEK	AFLDFYHSFLEK	3	AFLDFYHSFLEK3	40680.7	22697.6	38721.5
B4F767	B4F767	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	1	AFLDGFNEVAPLEWLR	AFLDGFNEVAPLEWLR	2	AFLDGFNEVAPLEWLR2			6485.7
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	AFLDSLPDVK	AFLDSLPDVK	2	AFLDSLPDVK2	35905.3	31823.2	28231.9
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	AFLEALQHQAETSSR	AFLEALQHQAETSSR	3	AFLEALQHQAETSSR3	50247.9	43888.8	52445.3
P53042	P53042	PPP5_RAT	Ppp5c	Serine/threonine-protein phosphatase 5	1	AFLEENQLDYIIR	AFLEENQLDYIIR	2	AFLEENQLDYIIR2	7504.01	4923.23	6635.37
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	AFLEHMSEVQPDSPQGIYDTLLELR	AFLEHMSEVQPDSPQGIYDTLLELR	3	AFLEHMSEVQPDSPQGIYDTLLELR3	6348.19	8271.75	6214.15
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	AFLEMDTK	AFLEMDTK	2	AFLEMDTK2	55642.6	56893.5	56569.6
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	AFLEVNEEGSEAAASTSVVITGR	AFLEVNEEGSEAAASTSVVITGR	3	AFLEVNEEGSEAAASTSVVITGR3	28213.6	27186.5	13538.7
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	AFLFCRPGSVLR	AFLFC(UniMod:4)RPGSVLR	3	AFLFC(UniMod:4)RPGSVLR3	212727	228228	208650
Q0D2L6	Q0D2L6;B2RZ38	Q0D2L6_RAT	Rragc	Ras-related GTP-binding protein	0	AFLFDVVSK	AFLFDVVSK	2	AFLFDVVSK2	74488.4	68341.4	65099.1
D4A4W9	P11250;D4A4W9	D4A4W9_RAT	Rpl34-ps1	60S ribosomal protein L34	0	AFLIEEQK	AFLIEEQK	2	AFLIEEQK2	50453.2	45331.3	45488.5
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	AFLIEPEHVNTVGYGK	AFLIEPEHVNTVGYGK	3	AFLIEPEHVNTVGYGK3	15234.8	18159.1	18617.2
A0A0G2JV05	A0A0G2JV05	A0A0G2JV05_RAT	Mroh1	Maestro heat-like repeat family member 1	1	AFLLGSTADR	AFLLGSTADR	2	AFLLGSTADR2	5776.03	3642.66	4880.28
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	AFLLHQPWNGR	AFLLHQPWNGR	3	AFLLHQPWNGR3	19128.6	27503.3	26254.2
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	AFLLMFIK	AFLLMFIK	2	AFLLMFIK2	3816.1	2150.9	
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	AFLLSGVDELEQR	AFLLSGVDELEQR	2	AFLLSGVDELEQR2	112957	124407	87427.6
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	AFLLSGVDELEQR	AFLLSGVDELEQR	3	AFLLSGVDELEQR3	124280	125109	131610
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	AFLLSGVDELEQRR	AFLLSGVDELEQRR	3	AFLLSGVDELEQRR3	39964	41194.4	38721.4
Q924S5	A0A8I6B3S7;Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	0	AFLMEQDPENDFLVTSHIHLHVPEGATPK	AFLMEQDPENDFLVTSHIHLHVPEGATPK	4	AFLMEQDPENDFLVTSHIHLHVPEGATPK4	6793.51	6080.73	
Q63470	Q63470	DYR1A_RAT	Dyrk1a	Dual specificity tyrosine-phosphorylation-regulated kinase 1A	1	AFLNQAQIEVR	AFLNQAQIEVR	2	AFLNQAQIEVR2	10225.8	12760.1	8832.34
Q5RJM1	Q5RJM1	PORED_RAT	Srd5a3	Polyprenol reductase	1	AFLPFLF	AFLPFLF	1	AFLPFLF1	66440		
Q5RJM1	Q5RJM1	PORED_RAT	Srd5a3	Polyprenol reductase	1	AFLPFLF	AFLPFLF	2	AFLPFLF2	14136.6		
Q499S6	Q499S6	Q499S6_RAT	Ctsf	Cathepsin F	1	AFLPMLDKDPLPQDFSVK	AFLPMLDKDPLPQDFSVK	3	AFLPMLDKDPLPQDFSVK3	5182	7305.57	16455.8
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	AFLPSGSVR	AFLPSGSVR	2	AFLPSGSVR2	37815.2	47070.6	45911
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	AFLQGGQEATDIALLLR	AFLQGGQEATDIALLLR	2	AFLQGGQEATDIALLLR2	9145.6	14501.7	6019.6
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	AFLQGGQEATDIALLLR	AFLQGGQEATDIALLLR	3	AFLQGGQEATDIALLLR3	12780	4021.56	17049.6
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	AFLRDEADFR	AFLRDEADFR	2	AFLRDEADFR2	405283	375076	440201
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	AFLRDEADFR	AFLRDEADFR	3	AFLRDEADFR3	3.76793e+06	4.29202e+06	123077
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	AFLRDEADFRDK	AFLRDEADFRDK	2	AFLRDEADFRDK2	42382.9	31938.6	35788.5
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	AFLRDEADFRDK	AFLRDEADFRDK	3	AFLRDEADFRDK3	585547	741330	842111
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	AFLSDMIK	AFLSDMIK	2	AFLSDMIK2	53723.5	58241.6	44576.2
D3Z9Y3	D3Z9Y3	D3Z9Y3_RAT	Cerk	Ceramide kinase	1	AFLSHQYYEGTVSFLPAQHTVGSPR	AFLSHQYYEGTVSFLPAQHTVGSPR	4	AFLSHQYYEGTVSFLPAQHTVGSPR4	3459.58		
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	AFLSIIEPPYFTAEPESR	AFLSIIEPPYFTAEPESR	3	AFLSIIEPPYFTAEPESR3	11179.1	3204.97	4100.95
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	AFLSPPTLLEGPLR	AFLSPPTLLEGPLR	2	AFLSPPTLLEGPLR2	29515.4	18883.8	19377.2
A0A0G2JV12	A0A0G2JV12	A0A0G2JV12_RAT	Col15a1	Collagen type XV alpha 1 chain	1	AFLSSHLQDLSTVVR	AFLSSHLQDLSTVVR	3	AFLSSHLQDLSTVVR3	4170.31	9431.79	8878.25
P04906	P04906	GSTP1_RAT	Gstp1	Glutathione S-transferase P	1	AFLSSPDHLNRPINGNGK	AFLSSPDHLNRPINGNGK	4	AFLSSPDHLNRPINGNGK4	5712.69		6524
Q568Z3	Q568Z3	Q568Z3_RAT	Paqr4	Progestin and adipoQ receptor family member 4	1	AFLTGPR	AFLTGPR	2	AFLTGPR2	37603.8	44306.4	31228.6
A0A8I6AQ54	A0A8I6AQ54	A0A8I6AQ54_RAT	Zfp846	Zinc finger protein 846	1	AFLTSSYLR	AFLTSSYLR	2	AFLTSSYLR2	8606.96	7670.79	6996.34
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	AFLVIADSLQQK	AFLVIADSLQQK	2	AFLVIADSLQQK2	33544.8	53723.3	47779.3
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	AFLVIADSLQQK	AFLVIADSLQQK	3	AFLVIADSLQQK3		3011.88	1767.37
P14630	P14630	APOM_RAT	Apom	Apolipoprotein M	1	AFLVTPR	AFLVTPR	2	AFLVTPR2	1.32018e+07	1.26452e+07	1.29201e+07
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	AFLYLGQNNFAEAHK	AFLYLGQNNFAEAHK	3	AFLYLGQNNFAEAHK3	17031.2	16709.2	20171.4
P01026	P01026	CO3_RAT	C3	Complement C3	1	AFMDCCNYITK	AFMDC(UniMod:4)C(UniMod:4)NYITK	2	AFMDC(UniMod:4)C(UniMod:4)NYITK2	466275	438812	396766
Q66H86	Q66H86	OLFL1_RAT	Olfml1	Olfactomedin-like protein 1	1	AFMEDSVKPGPR	AFMEDSVKPGPR	3	AFMEDSVKPGPR3	113652	108695	94310.9
E9PT90	E9PT90	E9PT90_RAT	Spart	Spartin	1	AFMFVNK	AFMFVNK	2	AFMFVNK2	39547.9	46393	36432.7
P21531	P21531	RL3_RAT	Rpl3	Large ribosomal subunit protein uL3	1	AFMGPLK	AFMGPLK	2	AFMGPLK2	22265.2	21203.8	4502.37
P12007	P12007	IVD_RAT	Ivd	Isovaleryl-CoA dehydrogenase, mitochondrial	1	AFNADFR	AFNADFR	2	AFNADFR2	20763.2	22384.3	29951.2
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	AFNASFELSQLR	AFNASFELSQLR	2	AFNASFELSQLR2	14244.8	9482.41	8830.12
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	AFNDPFIQK	AFNDPFIQK	2	AFNDPFIQK2	48857.9	77310.8	60744.8
P08650	P08650	CO5_RAT	C5	Complement C5	1	AFNECCTIADK	AFNEC(UniMod:4)C(UniMod:4)TIADK	2	AFNEC(UniMod:4)C(UniMod:4)TIADK2	14668.9	17604.9	14621.6
B0BNE5	B0BNE5	ESTD_RAT	Esd	S-formylglutathione hydrolase	1	AFNGYLGPDQSK	AFNGYLGPDQSK	2	AFNGYLGPDQSK2	18114.9	21755.6	8596.67
P14562	P14562	LAMP1_RAT	Lamp1	Lysosome-associated membrane glycoprotein 1	1	AFNINPSDK	AFNINPSDK	2	AFNINPSDK2	273596	280723	293139
P14562	P14562	LAMP1_RAT	Lamp1	Lysosome-associated membrane glycoprotein 1	1	AFNINPSDKYSGTCGAQLVTLK	AFNINPSDKYSGTC(UniMod:4)GAQLVTLK	3	AFNINPSDKYSGTC(UniMod:4)GAQLVTLK3	12511.6	13596.9	13616.8
Q9JKC9	Q9JKC9	SYNRG_RAT	Synrg	Synergin gamma	1	AFNSETDSFK	AFNSETDSFK	2	AFNSETDSFK2	10861.1	6764.59	12418.6
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	AFNSNNEQR	AFNSNNEQR	2	AFNSNNEQR2	2015.97		7847.85
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	AFNVPDEEK	AFNVPDEEK	2	AFNVPDEEK2	19022.7	19717.6	21023.9
Q02253	Q02253	MMSA_RAT	Aldh6a1	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial	1	AFPAWADTSILSR	AFPAWADTSILSR	2	AFPAWADTSILSR2	95411.6	94946.5	78872.6
A2RRU1	A2RRU1	GYS1_RAT	Gys1	Glycogen [starch] synthase, muscle	1	AFPDHFTYEPHEVDATQGYR	AFPDHFTYEPHEVDATQGYR	4	AFPDHFTYEPHEVDATQGYR4	10837.3	3664.44	7454.94
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	AFPFHIIFDR	AFPFHIIFDR	2	AFPFHIIFDR2	51164.1	51384.8	42357.9
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	AFPFHIIFDR	AFPFHIIFDR	3	AFPFHIIFDR3	156357	183473	169135
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	AFPFHIIFDRDLVVTQCGNAIYR	AFPFHIIFDRDLVVTQC(UniMod:4)GNAIYR	4	AFPFHIIFDRDLVVTQC(UniMod:4)GNAIYR4	16574.3	10798.8	21090.3
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	AFPGMCTYGK	AFPGMC(UniMod:4)TYGK	2	AFPGMC(UniMod:4)TYGK2	20045.5	8317.85	11994
Q7TQ16	Q7TQ16	QCR8_RAT	Uqcrq	Cytochrome b-c1 complex subunit 8	1	AFPHYFSK	AFPHYFSK	2	AFPHYFSK2	103473	82761.4	67822.9
A0A096MJF9	A0A096MJF9	A0A096MJF9_RAT	Tmem132e	Transmembrane protein 132E	1	AFPLLVAEAEGAGDLLR	AFPLLVAEAEGAGDLLR	2	AFPLLVAEAEGAGDLLR2	7668.39	4457.71	11180.3
Q32KJ5	Q32KJ5	Q32KJ5_RAT	Gns	N-acetylglucosamine-6-sulfatase	1	AFPNVIAPR	AFPNVIAPR	2	AFPNVIAPR2	36436.1	44105.5	45330.8
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	AFPTVFHSNLIQHEVVGK	AFPTVFHSNLIQHEVVGK	3	AFPTVFHSNLIQHEVVGK3	29182.3	38167.4	28757.7
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	AFPTVFHSNLIQHEVVGK	AFPTVFHSNLIQHEVVGK	4	AFPTVFHSNLIQHEVVGK4	30300.9	22678.8	31374.7
P26431	P26431	SL9A1_RAT	Slc9a1	Sodium/hydrogen exchanger 1	1	AFPVLDIDYLHVR	AFPVLDIDYLHVR	2	AFPVLDIDYLHVR2	12350.6	7980.09	11819.6
P26431	P26431	SL9A1_RAT	Slc9a1	Sodium/hydrogen exchanger 1	1	AFPVLDIDYLHVR	AFPVLDIDYLHVR	3	AFPVLDIDYLHVR3	17279.2	15004.8	21478.3
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	AFPVYLWQPYLR	AFPVYLWQPYLR	2	AFPVYLWQPYLR2	40191.4	53564.5	52955.9
D4ADE5	D4ADE5	D4ADE5_RAT	Setd7	Histone-lysine N-methyltransferase SETD7	1	AFQATQQK	AFQATQQK	2	AFQATQQK2	4439.44	8851.28	
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	AFQAVQNLPTK	AFQAVQNLPTK	2	AFQAVQNLPTK2	57913.6	55385.9	53620.4
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	AFQAVQNLPTKK	AFQAVQNLPTKK	2	AFQAVQNLPTKK2	2250.03	1220.33	1303.4
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	AFQAVQNLPTKK	AFQAVQNLPTKK	3	AFQAVQNLPTKK3	18673.4	26506.6	11656.6
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	AFQELVLEPAQR	AFQELVLEPAQR	2	AFQELVLEPAQR2	224150	232965	208245
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	AFQELVLEPAQR	AFQELVLEPAQR	3	AFQELVLEPAQR3	31232.2	29913.8	22088.4
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	AFQELVLEPAQRR	AFQELVLEPAQRR	3	AFQELVLEPAQRR3	3914.38	6086.9	6863.25
Q9Z0V6	Q9Z0V6	PRDX3_RAT	Prdx3	Thioredoxin-dependent peroxide reductase, mitochondrial	1	AFQFVETHGEVCPANWTPESPTIK	AFQFVETHGEVC(UniMod:4)PANWTPESPTIK	3	AFQFVETHGEVC(UniMod:4)PANWTPESPTIK3	9577.15	1407.48	12080.6
A0A0G2K516	A0A0G2K516	A0A0G2K516_RAT	Stx11	Syntaxin 11	1	AFQQAMYEYNQAEMK	AFQQAMYEYNQAEMK	2	AFQQAMYEYNQAEMK2	119521	123336	126277
A0A0G2K516	A0A0G2K516	A0A0G2K516_RAT	Stx11	Syntaxin 11	1	AFQQAMYEYNQAEMK	AFQQAMYEYNQAEMK	3	AFQQAMYEYNQAEMK3	101732	111665	117189
P51111	P51111	HD_RAT	Htt	Huntingtin	1	AFQSVFEVVAAPGSPYHR	AFQSVFEVVAAPGSPYHR	3	AFQSVFEVVAAPGSPYHR3	36516.7	31730.2	28693.7
F1LP42	F1LP42	F1LP42_RAT	Ihh	Hedgehog protein	1	AFQVIETQDPPR	AFQVIETQDPPR	2	AFQVIETQDPPR2	24779.1	17939.9	21255.3
F1LP42	F1LP42	F1LP42_RAT	Ihh	Hedgehog protein	1	AFQVIETQDPPRR	AFQVIETQDPPRR	2	AFQVIETQDPPRR2	10407	9929.32	8107.75
F1LP42	F1LP42	F1LP42_RAT	Ihh	Hedgehog protein	1	AFQVIETQDPPRR	AFQVIETQDPPRR	3	AFQVIETQDPPRR3	90490.6	89269.7	79888.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	AFREEYFDPSVVGWTVK	AFREEYFDPSVVGWTVK	3	AFREEYFDPSVVGWTVK3	109666	186967	121552
Q63313	Q63313	LBP_RAT	Lbp	Lipopolysaccharide-binding protein	1	AFRPFTPLITR	AFRPFTPLITR	3	AFRPFTPLITR3	89638.7	66290.4	70123.6
A0A0G2JUC9	A0A0G2JUC9	A0A0G2JUC9_RAT	Herc2	HECT-type E3 ubiquitin transferase	1	AFSANGK	AFSANGK	1	AFSANGK1	33582.6		28836.3
D3ZR63	D3ZR63	D3ZR63_RAT	Gfod1	Glucose-fructose oxidoreductase domain containing 1	1	AFSDIPSPYLR	AFSDIPSPYLR	2	AFSDIPSPYLR2	19939.6	20924.9	31144.5
A0A0G2JWD0	A0A0G2JWD0	A0A0G2JWD0_RAT	Prom1	Prominin 1	1	AFSDLDSIDSVLGGR	AFSDLDSIDSVLGGR	2	AFSDLDSIDSVLGGR2	13637	8210.89	11182.9
A0A0G2JWD0	A0A0G2JWD0	A0A0G2JWD0_RAT	Prom1	Prominin 1	1	AFSDLDSIDSVLGGR	AFSDLDSIDSVLGGR	3	AFSDLDSIDSVLGGR3	2449.66	1829.05	
B2RYL4	B2RYL4	B2RYL4_RAT	Armc6	Armadillo repeat containing 6	1	AFSDNPGVLSELCSTLSR	AFSDNPGVLSELC(UniMod:4)STLSR	2	AFSDNPGVLSELC(UniMod:4)STLSR2	6657.27	5360.69	1300.64
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	AFSDPFVEAEK	AFSDPFVEAEK	2	AFSDPFVEAEK2	645405	692011	661966
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	AFSDSEVTSHSSQDPLVVQEGSR	AFSDSEVTSHSSQDPLVVQEGSR	3	AFSDSEVTSHSSQDPLVVQEGSR3	3654.03	1733.87	4202.48
Q9WTT7	Q9WTT7	5MP1_RAT	Bzw2	eIF5-mimic protein 1	1	AFSEAEQTK	AFSEAEQTK	2	AFSEAEQTK2	26379.6	29237.2	34009.6
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	AFSENTLASIR	AFSENTLASIR	2	AFSENTLASIR2	2.18236e+06	2.19169e+06	2.24579e+06
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	AFSENTLASIR	AFSENTLASIR	3	AFSENTLASIR3	8707.7	13209.1	11049.1
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	AFSESHISLEPQNTR	AFSESHISLEPQNTR	3	AFSESHISLEPQNTR3	36851.3	39324.9	37069.5
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	AFSFSLPR	AFSFSLPR	2	AFSFSLPR2	617531	666065	664205
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	AFSFSLPRPGR	AFSFSLPRPGR	3	AFSFSLPRPGR3	594547	532477	602557
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	AFSGLTQNPQAIELR	AFSGLTQNPQAIELR	2	AFSGLTQNPQAIELR2	122452	121504	101619
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	AFSGLTQNPQAIELR	AFSGLTQNPQAIELR	3	AFSGLTQNPQAIELR3	45579.6	65737.6	57710.3
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	AFSIDIIR	AFSIDIIR	2	AFSIDIIR2	90543.6	89039.2	73539.4
Q641Z2	Q641Z2	PTN9_RAT	Ptpn9	Tyrosine-protein phosphatase non-receptor type 9	1	AFSIQTPEQYYFCYK	AFSIQTPEQYYFC(UniMod:4)YK	2	AFSIQTPEQYYFC(UniMod:4)YK2	7499.37	3498.53	
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	AFSLNPER	AFSLNPER	2	AFSLNPER2	63489.8	76653.1	67587.1
Q6TUD4	Q6TUD4	YIPF3_RAT	Yipf3	Protein YIPF3	1	AFSLYANIDILRPYFDVEPAQVR	AFSLYANIDILRPYFDVEPAQVR	3	AFSLYANIDILRPYFDVEPAQVR3	2969.82	8936.43	
A2RUW1	A2RUW1	TOLIP_RAT	Tollip	Toll-interacting protein	1	AFSMDDR	AFSMDDR	2	AFSMDDR2	62354.7	61206.4	71650.9
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	AFSNSTQSR	AFSNSTQSR	2	AFSNSTQSR2	102388		50357.6
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	AFSNVKGFER	AFSNVKGFER	3	AFSNVKGFER3	26438.9	25702.7	25955.4
P61621	P61621	S61A1_RAT	Sec61a1	Protein transport protein Sec61 subunit alpha isoform 1	1	AFSPTTVNTGR	AFSPTTVNTGR	2	AFSPTTVNTGR2	158053	154651	165730
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	AFSQLIYSITK	AFSQLIYSITK	2	AFSQLIYSITK2	59701.1	58873.1	65713.1
A0A8I6AMS6	A0A8I6AMS6	A0A8I6AMS6_RAT	Rangap1	RAN GTPase activating protein 1	1	AFSSSSFNSNTFLTR	AFSSSSFNSNTFLTR	2	AFSSSSFNSNTFLTR2	7019.03	8576.42	1165.15
O35763	O35763	MOES_RAT	Msn	Moesin	1	AFSTWLK	AFSTWLK	2	AFSTWLK2	254553	199941	250911
O35760	O35760	IDI1_RAT	Idi1	Isopentenyl-diphosphate Delta-isomerase 1	1	AFSVFLFNTENK	AFSVFLFNTENK	2	AFSVFLFNTENK2	8066.27	5373.98	8180.64
F7F5P9	F7F5P9	F7F5P9_RAT	G3bp2	G3BP stress granule assembly factor 2	1	AFSWASVTSK	AFSWASVTSK	2	AFSWASVTSK2	45014.9	49707.4	43746.8
Q2LC84	A1L1I3;Q2LC84	NUMB_RAT	Numb	Protein numb homolog	0	AFSYICR	AFSYIC(UniMod:4)R	2	AFSYIC(UniMod:4)R2	56068.8	48418.7	61933.7
A0A8I6AFZ5	A0A8I6AFZ5	A0A8I6AFZ5_RAT	Srsf7	Serine and arginine rich splicing factor 7	1	AFSYYGPLR	AFSYYGPLR	2	AFSYYGPLR2	41150.2	52046.1	35083.3
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	AFTATLSLFPYHK	AFTATLSLFPYHK	3	AFTATLSLFPYHK3	25767.5	29729.2	27417.4
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	AFTDVPSIQIYSSR	AFTDVPSIQIYSSR	2	AFTDVPSIQIYSSR2	25366.8	37753.9	34376.5
D3ZX38	D3ZX38	D3ZX38_RAT	Pfdn1	Prefoldin subunit 1	1	AFTELQAK	AFTELQAK	2	AFTELQAK2	71538.8	86678.4	67621.4
F1MAF8	F1MAF8	F1MAF8_RAT	Atg2b	Autophagy related 2B	1	AFTEVFLDDSHSPANR	AFTEVFLDDSHSPANR	3	AFTEVFLDDSHSPANR3	22340.1	24986.1	26719.7
Q5PQN6	Q5PQN6	SPE39_RAT	Vipas39	Spermatogenesis-defective protein 39 homolog	1	AFTFDDEDDELSQLK	AFTFDDEDDELSQLK	2	AFTFDDEDDELSQLK2	6811.44	11696.5	3099.65
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	AFTGEGQK	AFTGEGQK	1	AFTGEGQK1		1714.92	
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	AFTGEGQK	AFTGEGQK	2	AFTGEGQK2	223663	170207	164339
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	AFTGFIVEADTPGIHIGK	AFTGFIVEADTPGIHIGK	2	AFTGFIVEADTPGIHIGK2	10376.6	7526.56	6940.98
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	AFTGFIVEADTPGIHIGK	AFTGFIVEADTPGIHIGK	3	AFTGFIVEADTPGIHIGK3	49588.5	46368.2	52914.1
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	AFTGFIVEADTPGIHIGKK	AFTGFIVEADTPGIHIGKK	4	AFTGFIVEADTPGIHIGKK4	5472.45	3787.03	4613.96
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	AFTHGVAMTGGGGVNMGSHQK	AFTHGVAMTGGGGVNMGSHQK	3	AFTHGVAMTGGGGVNMGSHQK3	8164.73	7578.35	10337.4
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	AFTHGVAMTGGGGVNMGSHQK	AFTHGVAMTGGGGVNMGSHQK	4	AFTHGVAMTGGGGVNMGSHQK4	66527.4	57923.1	85043.9
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	AFTHTAQYDEAISDYFR	AFTHTAQYDEAISDYFR	3	AFTHTAQYDEAISDYFR3	20666.3	20007.7	24666.6
A0A0G2JST1	A0A0G2JST1	A0A0G2JST1_RAT	Adgrg6	Adhesion G protein-coupled receptor G6	1	AFTLCFEASK	AFTLC(UniMod:4)FEASK	2	AFTLC(UniMod:4)FEASK2	9397.81	7778.5	4372.56
A0A0G2JVT8	A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	1	AFTNTETATQEQMK	AFTNTETATQEQMK	2	AFTNTETATQEQMK2	3258.69		7138.55
Q9QWJ9	Q9QWJ9	NRP1_RAT	Nrp1	Neuropilin-1	1	AFTPLSTR	AFTPLSTR	2	AFTPLSTR2	27624.2	51743	30259.6
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	AFTSPEDACSFIMSADFPALVVK	AFTSPEDAC(UniMod:4)SFIMSADFPALVVK	3	AFTSPEDAC(UniMod:4)SFIMSADFPALVVK3		3878.72	
P07872	P07872	ACOX1_RAT	Acox1	Peroxisomal acyl-coenzyme A oxidase 1	1	AFTTWTANAGIEECR	AFTTWTANAGIEEC(UniMod:4)R	2	AFTTWTANAGIEEC(UniMod:4)R2	3762.6	4850.93	3273.1
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	AFTYINLDK	AFTYINLDK	2	AFTYINLDK2	44035.1	43085.4	47039.8
Q68FS8	Q68FS8	Q68FS8_RAT	Rtca	RNA 3'-terminal-phosphate cyclase (ATP)	1	AFVAGVLPLK	AFVAGVLPLK	2	AFVAGVLPLK2	50186.8	51075.4	49323.2
P27952	A0A0G2K8H4;A0A0U1RVI9;D3ZIY7;P27952;D3ZQW7	RS2_RAT	Rps2	Small ribosomal subunit protein uS5	0	AFVAIGDYNGHVGLGVK	AFVAIGDYNGHVGLGVK	2	AFVAIGDYNGHVGLGVK2	2085.48	1775.84	
P27952	A0A0G2K8H4;A0A0U1RVI9;D3ZIY7;P27952;D3ZQW7	RS2_RAT	Rps2	Small ribosomal subunit protein uS5	0	AFVAIGDYNGHVGLGVK	AFVAIGDYNGHVGLGVK	3	AFVAIGDYNGHVGLGVK3	40101.7	28837.7	17457.7
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	AFVAQMMTMLNR	AFVAQMMTMLNR	2	AFVAQMMTMLNR2	15627.1		11914.9
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	AFVAQMMTMLNR	AFVAQMMTMLNR	3	AFVAQMMTMLNR3		3426.33	
Q6P7R8	Q6P7R8	DHB12_RAT	Hsd17b12	Very-long-chain 3-oxoacyl-CoA reductase	1	AFVDFFSQCLHEEYK	AFVDFFSQC(UniMod:4)LHEEYK	2	AFVDFFSQC(UniMod:4)LHEEYK2	4535.22		
Q6P7R8	Q6P7R8	DHB12_RAT	Hsd17b12	Very-long-chain 3-oxoacyl-CoA reductase	1	AFVDFFSQCLHEEYK	AFVDFFSQC(UniMod:4)LHEEYK	3	AFVDFFSQC(UniMod:4)LHEEYK3	47669.6	72990.8	61583.2
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	AFVDNYGVAMETAEK	AFVDNYGVAMETAEK	2	AFVDNYGVAMETAEK2	19326.6	12270.7	26964.2
P15650	P15650	ACADL_RAT	Acadl	Long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	AFVDSCLQLHETK	AFVDSC(UniMod:4)LQLHETK	3	AFVDSC(UniMod:4)LQLHETK3	55000.7	52892.1	48881.6
O70196	O70196	PPCE_RAT	Prep	Prolyl endopeptidase	1	AFVEAQNK	AFVEAQNK	2	AFVEAQNK2	30630.4	25760	28503.3
O35796	O35796	C1QBP_RAT	C1qbp	Complement component 1 Q subcomponent-binding protein, mitochondrial	1	AFVEFLTDEIK	AFVEFLTDEIK	2	AFVEFLTDEIK2	16368.3	9012.45	2892.54
O35796	O35796	C1QBP_RAT	C1qbp	Complement component 1 Q subcomponent-binding protein, mitochondrial	1	AFVEFLTDEIKEEK	AFVEFLTDEIKEEK	2	AFVEFLTDEIKEEK2	28950.7	24782.1	12905.7
O35796	O35796	C1QBP_RAT	C1qbp	Complement component 1 Q subcomponent-binding protein, mitochondrial	1	AFVEFLTDEIKEEK	AFVEFLTDEIKEEK	3	AFVEFLTDEIKEEK3	215358	190376	212788
O35796	O35796	C1QBP_RAT	C1qbp	Complement component 1 Q subcomponent-binding protein, mitochondrial	1	AFVEFLTDEIKEEKK	AFVEFLTDEIKEEKK	3	AFVEFLTDEIKEEKK3	79417.8	66535.9	93662.4
O35796	O35796	C1QBP_RAT	C1qbp	Complement component 1 Q subcomponent-binding protein, mitochondrial	1	AFVEFLTDEIKEEKK	AFVEFLTDEIKEEKK	4	AFVEFLTDEIKEEKK4	50422.5	71478.4	76021.2
A7E3N2	A7E3N2	NCF2_RAT	Ncf2	Neutrophil cytosol factor 2	1	AFVEGCAAK	AFVEGC(UniMod:4)AAK	2	AFVEGC(UniMod:4)AAK2	6094.86	8415.91	5351.23
B2RYN0	B2RYN0	B2RYN0_RAT	Pgm3	Phosphoacetylglucosamine mutase	1	AFVELMK	AFVELMK	2	AFVELMK2	20742.9	11511.7	17129.7
D4A731	D4A731	D4A731_RAT	Ankib1	RBR-type E3 ubiquitin transferase	1	AFVENNPAIK	AFVENNPAIK	2	AFVENNPAIK2	18279.8	13327.4	23506.9
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	AFVENYPQFK	AFVENYPQFK	2	AFVENYPQFK2	35941.5	31812.7	45390.9
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	AFVESQQK	AFVESQQK	2	AFVESQQK2	85369.4	88857.4	115510
A0A8I6A6H8	A0A8I6A6H8	A0A8I6A6H8_RAT	Serpinb6a	Serpin family B member 6A	1	AFVEVNEEGTEAVAATGSTITMR	AFVEVNEEGTEAVAATGSTITMR	3	AFVEVNEEGTEAVAATGSTITMR3	27235	22181.9	16409.4
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	AFVFILEPK	AFVFILEPK	2	AFVFILEPK2	89371	90818.3	95325.1
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	AFVGNQLPFIGFTYFR	AFVGNQLPFIGFTYFR	2	AFVGNQLPFIGFTYFR2	47023.4	79480.8	36032.1
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	AFVGNQLPFIGFTYFR	AFVGNQLPFIGFTYFR	3	AFVGNQLPFIGFTYFR3	1688.39	5376.97	5370.82
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	AFVGVFEK	AFVGVFEK	2	AFVGVFEK2	450212	409217	409082
Q5XIF6	A0A8I6AF82;P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9;Q6AY56	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	AFVHWYVGEGMEEGEFSEAR	AFVHWYVGEGMEEGEFSEAR	3	AFVHWYVGEGMEEGEFSEAR3	2.10088e+06	2.19242e+06	2.24268e+06
Q6AY56	Q68FR8;Q6AY56	TBA8_RAT	Tuba8	Tubulin alpha-8 chain	0	AFVHWYVGEGMEEGEFSEAREDLAALEK	AFVHWYVGEGMEEGEFSEAREDLAALEK	4	AFVHWYVGEGMEEGEFSEAREDLAALEK4	56058.9	41571.1	51103.9
Q5XIF6	P68370;Q5XIF6;Q6AYZ1;Q6P9V9	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	AFVHWYVGEGMEEGEFSEAREDMAALEK	AFVHWYVGEGMEEGEFSEAREDMAALEK	4	AFVHWYVGEGMEEGEFSEAREDMAALEK4	3.49099e+06	3.18513e+06	3.00433e+06
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	AFVKNIR	AFVKNIR	2	AFVKNIR2	7016.96	4703.44	
P0CE43	P0CE43	GRB10_RAT	Grb10	Growth factor receptor-bound protein 10	1	AFVLTLCHQQK	AFVLTLC(UniMod:4)HQQK	2	AFVLTLC(UniMod:4)HQQK2	3878.38	4400.41	1687.78
P0CE43	P0CE43	GRB10_RAT	Grb10	Growth factor receptor-bound protein 10	1	AFVLTLCHQQK	AFVLTLC(UniMod:4)HQQK	3	AFVLTLC(UniMod:4)HQQK3	32275.6	13293.4	21249.9
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	AFVLVQVIIEETMR	AFVLVQVIIEETMR	3	AFVLVQVIIEETMR3	9426.82		
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	AFVNLPTENELTFNAEEYSDISEMR	AFVNLPTENELTFNAEEYSDISEMR	3	AFVNLPTENELTFNAEEYSDISEMR3	16293.4	16059.3	14028.6
D4A6W4	D4A6W4	D4A6W4_RAT	Rft1	Protein RFT1 homolog	1	AFVNWNEAR	AFVNWNEAR	2	AFVNWNEAR2	4079.05		
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	AFVPAILFK	AFVPAILFK	2	AFVPAILFK2	36360.9	51355.5	42163
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	AFVPPLAEDLLAR	AFVPPLAEDLLAR	2	AFVPPLAEDLLAR2	132374	159496	138369
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	AFVPPLAEDLLAR	AFVPPLAEDLLAR	3	AFVPPLAEDLLAR3	7306.02	6371.91	7877.34
Q6AYR4	Q6AYR4	TOR2A_RAT	Tor2a	Torsin-2A	1	AFVQDPAPSKPLVLSLHGWTGTGK	AFVQDPAPSKPLVLSLHGWTGTGK	4	AFVQDPAPSKPLVLSLHGWTGTGK4	12602.9	9514.69	10329.5
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	AFVSGFDGSAGTAIITEEHAAMWTDGR	AFVSGFDGSAGTAIITEEHAAMWTDGR	3	AFVSGFDGSAGTAIITEEHAAMWTDGR3	23782.9	17541	16323.7
A0A0G2JZZ4	A0A0G2JZZ4	A0A0G2JZZ4_RAT	Selenom	Selenoprotein M	1	AFVTQDIQLYHNLVMK	AFVTQDIQLYHNLVMK	3	AFVTQDIQLYHNLVMK3	6414.75	4209.36	8329.31
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	AFVVGTMER	AFVVGTMER	2	AFVVGTMER2	2.82503e+06	3.10887e+06	3.15571e+06
Q09325	Q09325	MGAT1_RAT	Mgat1	Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	1	AFWDDWMR	AFWDDWMR	2	AFWDDWMR2	11653.9	8137.64	12367.9
Q8CHI9	Q8CHI9	CHSTF_RAT	Chst15	Carbohydrate sulfotransferase 15	1	AFWGHLSHVHGK	AFWGHLSHVHGK	3	AFWGHLSHVHGK3	37267.5	19774.9	62765.8
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	AFWLDISHNHLETLAEGLFSSLGR	AFWLDISHNHLETLAEGLFSSLGR	3	AFWLDISHNHLETLAEGLFSSLGR3	16495	45601.8	11480.9
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	AFWLDISHNHLETLAEGLFSSLGR	AFWLDISHNHLETLAEGLFSSLGR	4	AFWLDISHNHLETLAEGLFSSLGR4	476773	376567	542982
Q63798	Q63798	PSME2_RAT	Psme2	Proteasome activator complex subunit 2	1	AFYAELHHIISSNLEK	AFYAELHHIISSNLEK	3	AFYAELHHIISSNLEK3	66170.7	69448.1	53566.4
Q63798	Q63798	PSME2_RAT	Psme2	Proteasome activator complex subunit 2	1	AFYAELHHIISSNLEK	AFYAELHHIISSNLEK	4	AFYAELHHIISSNLEK4	33299.1	34727.8	25248
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	AFYAPVHADDLR	AFYAPVHADDLR	2	AFYAPVHADDLR2	4108.45	9405.7	
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	AFYAPVHADDLR	AFYAPVHADDLR	3	AFYAPVHADDLR3	82772.9	79817.2	100318
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	AFYDTLDAAHSK	AFYDTLDAAHSK	2	AFYDTLDAAHSK2	12241.4	3843.28	1310.7
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	AFYDTLDAAHSK	AFYDTLDAAHSK	3	AFYDTLDAAHSK3	10194.5	16243.3	5111.83
P01026	P01026	CO3_RAT	C3	Complement C3	1	AFYEHAPK	AFYEHAPK	1	AFYEHAPK1	29846.8	33514.1	28951.8
P01026	P01026	CO3_RAT	C3	Complement C3	1	AFYEHAPK	AFYEHAPK	2	AFYEHAPK2	708341	759361	578113
Q5XIE1	Q5XIE1	THEM6_RAT	Them6	Protein THEM6	1	AFYLEAR	AFYLEAR	2	AFYLEAR2	28249.3	23413.6	23409.6
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	AFYMEEGAPYCER	AFYMEEGAPYC(UniMod:4)ER	2	AFYMEEGAPYC(UniMod:4)ER2	71279.5	69159.6	86542.5
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	AFYMEEGAPYCER	AFYMEEGAPYC(UniMod:4)ER	3	AFYMEEGAPYC(UniMod:4)ER3	14863.9	16788	14736.6
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	AFYMEEGAPYCERDYEK	AFYMEEGAPYC(UniMod:4)ERDYEK	3	AFYMEEGAPYC(UniMod:4)ERDYEK3	32524.8	39091.5	36591.5
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	AFYSAEIPENVQTHSPVVHVQANSPEGLK	AFYSAEIPENVQTHSPVVHVQANSPEGLK	4	AFYSAEIPENVQTHSPVVHVQANSPEGLK4	27474.8	24333.8	14246.5
Q704E8	Q704E8	ABCB7_RAT	Abcb7	Iron-sulfur clusters transporter ABCB7, mitochondrial	1	AGAAFFNEVR	AGAAFFNEVR	2	AGAAFFNEVR2	33152.3	40996.6	43815
Q9ESS6	Q9ESS6	BCAM_RAT	Bcam	Basal cell adhesion molecule	1	AGAAGTSEATSSVR	AGAAGTSEATSSVR	2	AGAAGTSEATSSVR2	6299.65	6079.83	8816.68
A0A0G2K687	A0A0G2K687	A0A0G2K687_RAT	Rubcn	Rubicon autophagy regulator	1	AGAAHVER	AGAAHVER	2	AGAAHVER2			13743.1
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	AGACNSVIK	AGAC(UniMod:4)NSVIK	1	AGAC(UniMod:4)NSVIK1	19092.2	11018	10106.7
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	AGACNSVIK	AGAC(UniMod:4)NSVIK	2	AGAC(UniMod:4)NSVIK2	981946	987509	972784
A0A0G2K1N9	A0A0G2K1N9	A0A0G2K1N9_RAT	Selenoo	Selenoprotein O	1	AGACVTSESTVMR	AGAC(UniMod:4)VTSESTVMR	2	AGAC(UniMod:4)VTSESTVMR2	6648.2	5733.92	5819.85
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	AGADEERAETAR	AGADEERAETAR	3	AGADEERAETAR3			48669.8
P06214	P06214	HEM2_RAT	Alad	Delta-aminolevulinic acid dehydratase	1	AGADIIITYFAPQLLK	AGADIIITYFAPQLLK	2	AGADIIITYFAPQLLK2	9189.86	8996.48	6863.69
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	AGADPGPGER	AGADPGPGER	2	AGADPGPGER2			159100
D3ZIC2	D3ZIC2	D3ZIC2_RAT	Uroc1	urocanate hydratase	1	AGADVEK	AGADVEK	1	AGADVEK1	284313	37947.6	270178
D4A7F0	D4A7F0	D4A7F0_RAT	Ubr3	E3 ubiquitin-protein ligase	1	AGAEELQALLER	AGAEELQALLER	2	AGAEELQALLER2	4704.55		
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	AGAEGILTNR	AGAEGILTNR	2	AGAEGILTNR2	113789	125400	108156
Q5XHZ9	Q5XHZ9	PCH2_RAT	Trip13	Pachytene checkpoint protein 2 homolog	1	AGAEPSDAIR	AGAEPSDAIR	2	AGAEPSDAIR2	26791.7	21681.8	22867.1
D3ZZC5	D3ZZC5	D3ZZC5_RAT	Tradd	Tumor necrosis factor receptor type 1-associated DEATH domain protein	1	AGAEQLDSWLTDEER	AGAEQLDSWLTDEER	2	AGAEQLDSWLTDEER2	10522.6		5230.78
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	AGAFDAVPCYHWSAGGK	AGAFDAVPC(UniMod:4)YHWSAGGK	3	AGAFDAVPC(UniMod:4)YHWSAGGK3	29562	23192.3	31940.2
F7ELE5	F7ELE5	F7ELE5_RAT	Ndufs7	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial	1	AGAGAVVPK	AGAGAVVPK	1	AGAGAVVPK1	852.064	417.844	
F7ELE5	F7ELE5	F7ELE5_RAT	Ndufs7	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial	1	AGAGAVVPK	AGAGAVVPK	2	AGAGAVVPK2	51204.1	37055.9	35151
F7ELE5	F7ELE5	F7ELE5_RAT	Ndufs7	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial	1	AGAGAVVPKPSHLPR	AGAGAVVPKPSHLPR	3	AGAGAVVPKPSHLPR3	6871.58	8580.52	6491.41
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	AGAGSATLSMAYAGAR	AGAGSATLSMAYAGAR	2	AGAGSATLSMAYAGAR2	301561	254513	336100
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	AGAGSATLSMAYAGAR	AGAGSATLSMAYAGAR	3	AGAGSATLSMAYAGAR3	29847.4	36640.8	39674
D3ZDR5	D3ZDR5	D3ZDR5_RAT	Prmt9	Protein arginine methyltransferase 9	1	AGAHSVYACELSK	AGAHSVYAC(UniMod:4)ELSK	3	AGAHSVYAC(UniMod:4)ELSK3	6001.38		7518.69
P19945	P19945	RLA0_RAT	Rplp0	Large ribosomal subunit protein uL10	1	AGAIAPCEVTVPAQNTGLGPEK	AGAIAPC(UniMod:4)EVTVPAQNTGLGPEK	3	AGAIAPC(UniMod:4)EVTVPAQNTGLGPEK3	128338	119265	107344
C0HJX2;C0HJX3	A0A0G2KBC9;C0HJX3;C0HJX2	LRB3A_RAT;LRB3B_RAT	Lilrb3a;Lilrb3b	Leukocyte immunoglobulin-like receptor subfamily B member 3A	0	AGAISPVVSR	AGAISPVVSR	2	AGAISPVVSR2	15353	19368.1	17880.7
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	AGAKPDQIGIITPYEGQR	AGAKPDQIGIITPYEGQR	3	AGAKPDQIGIITPYEGQR3	39031.1	26855	36159.3
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	AGALCAMR	AGALC(UniMod:4)AMR	2	AGALC(UniMod:4)AMR2	19765.1	27402.3	24139.7
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	AGALNSNDAFVLK	AGALNSNDAFVLK	2	AGALNSNDAFVLK2	71215.4	65557.2	71278.7
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AGALQCSPSDVYTK	AGALQC(UniMod:4)SPSDVYTK	2	AGALQC(UniMod:4)SPSDVYTK2	2.05009e+06	1.91078e+06	1.92855e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AGALQCSPSDVYTKK	AGALQC(UniMod:4)SPSDVYTKK	2	AGALQC(UniMod:4)SPSDVYTKK2	1046.34	3474.76	2560.27
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AGALQCSPSDVYTKK	AGALQC(UniMod:4)SPSDVYTKK	3	AGALQC(UniMod:4)SPSDVYTKK3	20895.9	16661	19924.2
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	AGAPNGLFNVVQGGAATGQFLCQHR	AGAPNGLFNVVQGGAATGQFLC(UniMod:4)QHR	3	AGAPNGLFNVVQGGAATGQFLC(UniMod:4)QHR3	22153.1	35999.9	30950.2
B1WBT4	B1WBT4	B1WBT4_RAT	Srpk2	SRSF protein kinase 2	1	AGAPPPSGSAVSTAPQQKPIGK	AGAPPPSGSAVSTAPQQKPIGK	3	AGAPPPSGSAVSTAPQQKPIGK3	26942.6	34749.7	17420.8
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	AGAQEGAER	AGAQEGAER	1	AGAQEGAER1			31355.1
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	AGAQEGAER	AGAQEGAER	2	AGAQEGAER2			2.10755e+06
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	AGAQEGAERGVSAIR	AGAQEGAERGVSAIR	3	AGAQEGAERGVSAIR3	89992.6	56723.1	108067
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	AGAQEGAERGVSAIRER	AGAQEGAERGVSAIRER	3	AGAQEGAERGVSAIRER3	12606.6	16293	31082
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	AGAQEGAERGVSAIRER	AGAQEGAERGVSAIRER	4	AGAQEGAERGVSAIRER4	56490.4	46651.5	94106.2
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	AGAQGDPDVPECLK	AGAQGDPDVPEC(UniMod:4)LK	2	AGAQGDPDVPEC(UniMod:4)LK2	57219	60670.5	61042.3
A0A8I5ZZF0	A0A8I5ZZF0	A0A8I5ZZF0_RAT	Itih5	Inter-alpha-trypsin inhibitor heavy chain 5	1	AGAQLIGFYDEIR	AGAQLIGFYDEIR	2	AGAQLIGFYDEIR2	1263.13	2275.98	
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	AGAQTAVTR	AGAQTAVTR	2	AGAQTAVTR2	155703		109702
Q9JKW1	Q9JKW1	TIM22_RAT	Timm22	Mitochondrial import inner membrane translocase subunit Tim22	1	AGASAPEAAGSAEAPLQYSLLLQHLVGDK	AGASAPEAAGSAEAPLQYSLLLQHLVGDK	3	AGASAPEAAGSAEAPLQYSLLLQHLVGDK3	4900.71	6777.46	
Q9QUR2	Q9QUR2	DCTN4_RAT	Dctn4	Dynactin subunit 4	1	AGASISTLAGLSLR	AGASISTLAGLSLR	2	AGASISTLAGLSLR2	26842.1	20791	30042.4
D3ZZU4	D3ZZU4	D3ZZU4_RAT	Tmem160	Transmembrane protein 160	1	AGASPPPVSELDR	AGASPPPVSELDR	2	AGASPPPVSELDR2	25740.4	13213.3	33383.6
D3ZUM4	D3ZUM4	D3ZUM4_RAT	Glb1	Beta-galactosidase	1	AGATLDILVENMGR	AGATLDILVENMGR	2	AGATLDILVENMGR2	9821.7	7776.93	
A0A0G2K7W5	A0A0G2K7W5	A0A0G2K7W5_RAT	Ahsa2	Activator of HSP90 ATPase homolog 2	1	AGATQALTLER	AGATQALTLER	2	AGATQALTLER2	10689.5	8135.91	9866.69
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	AGATSEGVLANFFNSLLSK	AGATSEGVLANFFNSLLSK	2	AGATSEGVLANFFNSLLSK2		18682.9	16837
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	AGATSVTPGPR	AGATSVTPGPR	2	AGATSVTPGPR2	29161.6	29198.4	28195.8
Q5U2N3	A0A8I6AUE0;Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	0	AGAVDVVR	AGAVDVVR	2	AGAVDVVR2	67009.1	79364.4	80461.6
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	AGAVEQLR	AGAVEQLR	2	AGAVEQLR2	41484.3	37434.1	47095.7
Q9WTR7	Q9WTR7	SC11C_RAT	Sec11c	Signal peptidase complex catalytic subunit SEC11C	1	AGAVGTHLPTSSLDIFGDLR	AGAVGTHLPTSSLDIFGDLR	3	AGAVGTHLPTSSLDIFGDLR3	11610.9	9297.89	15670.6
Q9WTR7	Q9WTR7	SC11C_RAT	Sec11c	Signal peptidase complex catalytic subunit SEC11C	1	AGAVGTHLPTSSLDIFGDLRK	AGAVGTHLPTSSLDIFGDLRK	3	AGAVGTHLPTSSLDIFGDLRK3	2858.01	7334.79	8549.2
Q9WTR7	Q9WTR7	SC11C_RAT	Sec11c	Signal peptidase complex catalytic subunit SEC11C	1	AGAVGTHLPTSSLDIFGDLRK	AGAVGTHLPTSSLDIFGDLRK	4	AGAVGTHLPTSSLDIFGDLRK4	25837.5	29477.4	24226.6
P14740	P14740	DPP4_RAT	Dpp4	Dipeptidyl peptidase 4	1	AGAVNPTVK	AGAVNPTVK	2	AGAVNPTVK2	15389.8	15479	12359.7
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	AGAVSALAK	AGAVSALAK	2	AGAVSALAK2	101209	158434	122166
O88923	O88923	AGRL2_RAT	Adgrl2	Adhesion G protein-coupled receptor L2	1	AGAWCKDPLQAADK	AGAWC(UniMod:4)KDPLQAADK	3	AGAWC(UniMod:4)KDPLQAADK3	1633.47		5897.58
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	AGAWTTIPFGGLVHDK	AGAWTTIPFGGLVHDK	2	AGAWTTIPFGGLVHDK2	25849.4	17732.7	16467.7
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	AGAWTTIPFGGLVHDK	AGAWTTIPFGGLVHDK	3	AGAWTTIPFGGLVHDK3	73713.2	82653.7	82354.9
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	AGAWTTIPFGGLVHDKK	AGAWTTIPFGGLVHDKK	3	AGAWTTIPFGGLVHDKK3	12358.4	4565.72	12541.4
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	AGAWTTIPFGGLVHDKK	AGAWTTIPFGGLVHDKK	4	AGAWTTIPFGGLVHDKK4	15334.6	25802.2	17257.8
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	AGCAVTSLLASELTK	AGC(UniMod:4)AVTSLLASELTK	2	AGC(UniMod:4)AVTSLLASELTK2	139109	112419	142087
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	AGCAVTSLLASELTK	AGC(UniMod:4)AVTSLLASELTK	3	AGC(UniMod:4)AVTSLLASELTK3	47890.1	48584.1	50703.6
Q6AYB9	Q6AYB9	Q6AYB9_RAT	Prmt2	Protein arginine methyltransferase 2	1	AGCCGYIPANHLGK	AGC(UniMod:4)C(UniMod:4)GYIPANHLGK	3	AGC(UniMod:4)C(UniMod:4)GYIPANHLGK3	10887.9	6759.86	6579.22
Q920J4	Q920J4	TXNL1_RAT	Txnl1	Thioredoxin-like protein 1	1	AGCECLNESDEHGFDNCLR	AGC(UniMod:4)EC(UniMod:4)LNESDEHGFDNC(UniMod:4)LR	3	AGC(UniMod:4)EC(UniMod:4)LNESDEHGFDNC(UniMod:4)LR3	72302.4	67190.5	62871.4
Q920J4	Q920J4	TXNL1_RAT	Txnl1	Thioredoxin-like protein 1	1	AGCECLNESDEHGFDNCLRK	AGC(UniMod:4)EC(UniMod:4)LNESDEHGFDNC(UniMod:4)LRK	3	AGC(UniMod:4)EC(UniMod:4)LNESDEHGFDNC(UniMod:4)LRK3	6716.19	9063.37	9248.15
Q920J4	Q920J4	TXNL1_RAT	Txnl1	Thioredoxin-like protein 1	1	AGCECLNESDEHGFDNCLRK	AGC(UniMod:4)EC(UniMod:4)LNESDEHGFDNC(UniMod:4)LRK	4	AGC(UniMod:4)EC(UniMod:4)LNESDEHGFDNC(UniMod:4)LRK4	37519.3	39351.7	40947.2
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	AGCIEVQVQSLDTTVTQTAEAVEK	AGC(UniMod:4)IEVQVQSLDTTVTQTAEAVEK	3	AGC(UniMod:4)IEVQVQSLDTTVTQTAEAVEK3	11665.8	20145.7	9369.9
D4A0G0	D4A0G0	D4A0G0_RAT	Osbpl7	Oxysterol-binding protein	1	AGCKPFNPVLGETYECERPDR	AGC(UniMod:4)KPFNPVLGETYEC(UniMod:4)ERPDR	4	AGC(UniMod:4)KPFNPVLGETYEC(UniMod:4)ERPDR4	9464.44	17142.5	7320.09
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	AGCPMLALEVLSK	AGC(UniMod:4)PMLALEVLSK	2	AGC(UniMod:4)PMLALEVLSK2	15588.2	21753.8	19820.4
P06214	P06214	HEM2_RAT	Alad	Delta-aminolevulinic acid dehydratase	1	AGCQVVAPSDMMDGR	AGC(UniMod:4)QVVAPSDMMDGR	2	AGC(UniMod:4)QVVAPSDMMDGR2	34819.9	24539.6	25105.3
Q6MG59	Q6MG59	G6B_RAT	Mpig6b	Megakaryocyte and platelet inhibitory receptor G6b	1	AGCRPSGSTHGSEYSK	AGC(UniMod:4)RPSGSTHGSEYSK	3	AGC(UniMod:4)RPSGSTHGSEYSK3			30239.8
Q8R4S8	Q8R4S8	CRLF2_RAT	Crlf2	Cytokine receptor-like factor 2	1	AGCVLPMGK	AGC(UniMod:4)VLPMGK	2	AGC(UniMod:4)VLPMGK2	9548.03	9251.62	8561.71
D3ZWS0	D3ZWS0	D3ZWS0_RAT	Scrib	Scribble planar cell polarity protein	1	AGDAGIFISR	AGDAGIFISR	2	AGDAGIFISR2	14056.5	10466.5	7756.39
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	AGDEDRGQLEDDAVYEDQSQK	AGDEDRGQLEDDAVYEDQSQK	3	AGDEDRGQLEDDAVYEDQSQK3	1952.18	1538.42	2872.63
O08623	O08623	SQSTM_RAT	Sqstm1	Sequestosome-1	1	AGDGRPCPTAESASAPSEDPNVNFLK	AGDGRPC(UniMod:4)PTAESASAPSEDPNVNFLK	3	AGDGRPC(UniMod:4)PTAESASAPSEDPNVNFLK3	22361.8	22880.5	26740.4
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	AGDIALLYLQEIER	AGDIALLYLQEIER	2	AGDIALLYLQEIER2	12002.1	16140.2	11560.4
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	AGDIALLYLQEIER	AGDIALLYLQEIER	3	AGDIALLYLQEIER3	3771.65	4495.25	
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	AGDISCR	AGDISC(UniMod:4)R	2	AGDISC(UniMod:4)R2			244724
F1M7Z1	F1M7Z1	F1M7Z1_RAT	Edc3	Enhancer of mRNA-decapping protein 3	1	AGDITELK	AGDITELK	2	AGDITELK2	23984.8	25470.9	21470.6
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	AGDKDDITEPAVCALR	AGDKDDITEPAVC(UniMod:4)ALR	3	AGDKDDITEPAVC(UniMod:4)ALR3	8195.32	7195.65	10916
Q68FU3	Q68FU3	ETFB_RAT	Etfb	Electron transfer flavoprotein subunit beta	1	AGDLGVDLTSK	AGDLGVDLTSK	2	AGDLGVDLTSK2	82959.6	79078.5	94189.4
A0A0G2K652	A0A0G2K652	A0A0G2K652_RAT	Cul9	Cullin 9	1	AGDLMVPLGPR	AGDLMVPLGPR	2	AGDLMVPLGPR2	9115.97	11506.4	9581.78
A0A8I6A502	A0A8I6A502	A0A8I6A502_RAT	Tns3	Tensin 3	1	AGDLSNELVR	AGDLSNELVR	2	AGDLSNELVR2	11947.6	13899.3	11486.4
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	AGDMESAENILTVMK	AGDMESAENILTVMK	2	AGDMESAENILTVMK2	7356.5	5630.44	11932
Q8VHK7	Q8VHK7	HDGF_RAT	Hdgf	Hepatoma-derived growth factor	1	AGDMLEDSPK	AGDMLEDSPK	2	AGDMLEDSPK2	11682.4	16729.9	7912.06
Q6UPR8	Q6UPR8	ERMP1_RAT	Ermp1	Endoplasmic reticulum metallopeptidase 1	1	AGDNILAVLK	AGDNILAVLK	2	AGDNILAVLK2	6713.91	12929.3	5949.86
Q5XI79	Q5XI79	NDUF7_RAT	Ndufaf7	Protein arginine methyltransferase NDUFAF7, mitochondrial	1	AGDPSLQQQLLR	AGDPSLQQQLLR	2	AGDPSLQQQLLR2	4580.42	4438.68	9258.52
O08774	O08774	RGS12_RAT	Rgs12	Regulator of G-protein signaling 12	1	AGDQILAINEINVK	AGDQILAINEINVK	2	AGDQILAINEINVK2	4027.36	3342.35	5317.6
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	AGDSCSHWMYFSDATK	AGDSC(UniMod:4)SHWMYFSDATK	3	AGDSC(UniMod:4)SHWMYFSDATK3	9265.67	7907.69	21500
Q4AE70	Q4AE70	CARM1_RAT	Carm1	Histone-arginine methyltransferase CARM1	1	AGDTLSGTCLLIANK	AGDTLSGTC(UniMod:4)LLIANK	2	AGDTLSGTC(UniMod:4)LLIANK2	4980.34	6770	
P12711	P12711	ADHX_RAT	Adh5	Alcohol dehydrogenase class-3	1	AGDTVIPLYIPQCGECK	AGDTVIPLYIPQC(UniMod:4)GEC(UniMod:4)K	2	AGDTVIPLYIPQC(UniMod:4)GEC(UniMod:4)K2	25944.4	21064.1	20208.8
A0A8I6A2X2	A0A8I6A2X2	A0A8I6A2X2_RAT	Polr2d	RNA polymerase II subunit D	1	AGDVEEDASQLIFPK	AGDVEEDASQLIFPK	2	AGDVEEDASQLIFPK2	1110.42		
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	AGDVLWLR	AGDVLWLR	2	AGDVLWLR2	1.69235e+06	1.66832e+06	1.71656e+06
A0A0G2K4Y6	A0A0G2K4Y6	A0A0G2K4Y6_RAT	Haus6	Family with sequence similarity 29, member A	1	AGDVSSESSSTLHNQR	AGDVSSESSSTLHNQR	3	AGDVSSESSSTLHNQR3		6228.11	
D3ZHJ3	D3ZHJ3	D3ZHJ3_RAT	Sema3b	Semaphorin 3B	1	AGEAAHTQVLAEER	AGEAAHTQVLAEER	3	AGEAAHTQVLAEER3	2264.48	8306.84	
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	AGEADGMVCEVSTAGIALLNR	AGEADGMVC(UniMod:4)EVSTAGIALLNR	3	AGEADGMVC(UniMod:4)EVSTAGIALLNR3	7988.51		3375.19
Q4FZV0	Q4FZV0	MANBA_RAT	Manba	Beta-mannosidase	1	AGEAMVLFQMPVSK	AGEAMVLFQMPVSK	2	AGEAMVLFQMPVSK2	12826	12919.4	19709.3
Q4FZV0	Q4FZV0	MANBA_RAT	Manba	Beta-mannosidase	1	AGEAMVLFQMPVSK	AGEAMVLFQMPVSK	3	AGEAMVLFQMPVSK3	1797.11	1323.93	1174.69
O35806	O35806	LTBP2_RAT	Ltbp2	Latent-transforming growth factor beta-binding protein 2	1	AGEAPRPPPVPSR	AGEAPRPPPVPSR	3	AGEAPRPPPVPSR3	13758.3	21178.8	14719.8
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	AGEDGEVSGEGLLPFDPK	AGEDGEVSGEGLLPFDPK	2	AGEDGEVSGEGLLPFDPK2	15957.6	14174.2	12627.3
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	AGEDLSIMK	AGEDLSIMK	2	AGEDLSIMK2	3602.02	3998.94	6826.53
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	AGEEATLDCEAQGSPTPLVTWTK	AGEEATLDC(UniMod:4)EAQGSPTPLVTWTK	3	AGEEATLDC(UniMod:4)EAQGSPTPLVTWTK3	13690	21117	9916.1
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	AGEEDEGDVDSDWDHETSAK	AGEEDEGDVDSDWDHETSAK	3	AGEEDEGDVDSDWDHETSAK3	3423.45		
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	AGEEERGDGDPVSVVTVR	AGEEERGDGDPVSVVTVR	2	AGEEERGDGDPVSVVTVR2	6237.3	5458.67	6441.69
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	AGEEERGDGDPVSVVTVR	AGEEERGDGDPVSVVTVR	3	AGEEERGDGDPVSVVTVR3	344441	362951	316823
P10716	P10716	CLC4F_RAT	Clec4f	C-type lectin domain family 4 member F	1	AGEEMTSLK	AGEEMTSLK	2	AGEEMTSLK2	9136.32	6986.95	11253.2
Q4KLJ8	Q4KLJ8	PDCL3_RAT	Pdcl3	Phosducin-like protein 3	1	AGEGLWVVLHLYK	AGEGLWVVLHLYK	3	AGEGLWVVLHLYK3	22311	20083.4	17178.9
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	AGEGNEEISNMIHSYIK	AGEGNEEISNMIHSYIK	3	AGEGNEEISNMIHSYIK3	7356.4	13002.5	12548.4
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	AGEIFER	AGEIFER	2	AGEIFER2	135916	121543	120991
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	AGEIPACPGPCEEVK	AGEIPAC(UniMod:4)PGPC(UniMod:4)EEVK	2	AGEIPAC(UniMod:4)PGPC(UniMod:4)EEVK2	49352.1	54068	57140.1
Q9WTR7	Q9WTR7	SC11C_RAT	Sec11c	Signal peptidase complex catalytic subunit SEC11C	1	AGEIVVFK	AGEIVVFK	2	AGEIVVFK2	41651.1	48227.4	41491.3
F1M3G7	F1M3G7	AKP13_RAT	Akap13	A-kinase anchor protein 13	1	AGELEHSLLTPDATTQNSKPQVGESAK	AGELEHSLLTPDATTQNSKPQVGESAK	4	AGELEHSLLTPDATTQNSKPQVGESAK4	2957.9	2153.23	
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	AGELEVFNGYFVHFFAPENLDPIPK	AGELEVFNGYFVHFFAPENLDPIPK	3	AGELEVFNGYFVHFFAPENLDPIPK3	31420.5	63181.8	72513.4
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	AGELEVFNGYFVHFFAPENLDPIPK	AGELEVFNGYFVHFFAPENLDPIPK	4	AGELEVFNGYFVHFFAPENLDPIPK4	255914	271214	230304
Q63737	A0A8I6A6H0;Q63737	PHLP_RAT	Pdcl	Phosducin-like protein	0	AGELIGNFVR	AGELIGNFVR	2	AGELIGNFVR2	21417.1	29916.4	21933.8
D4A0T9	D4A0T9	D4A0T9_RAT	Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	1	AGELLLLWGK	AGELLLLWGK	2	AGELLLLWGK2	8088.41	4429.57	7550.71
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	AGELNQLLNAVK	AGELNQLLNAVK	2	AGELNQLLNAVK2	29738.5	19097.9	22284.6
P62271	D3ZM33;P62271;A0A0G2KA79;D3ZAU6	RS18_RAT	Rps18	Small ribosomal subunit protein uS13	0	AGELTEDEVER	AGELTEDEVER	2	AGELTEDEVER2	13111.2	15565.1	15578.5
A0A8I6GEF9	A0A8I6GEF9	A0A8I6GEF9_RAT	Mrpl58	Mitochondrial ribosomal protein L58	1	AGELVLTSESSR	AGELVLTSESSR	2	AGELVLTSESSR2	7211.93	6389.22	3189.22
Q99MS0	Q99MS0	S14L2_RAT	Sec14l2	SEC14-like protein 2	1	AGEMTEVLPNQR	AGEMTEVLPNQR	2	AGEMTEVLPNQR2	38310	28794.5	29782.7
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	AGEPVELFGK	AGEPVELFGK	2	AGEPVELFGK2	1.09294e+06	1.08661e+06	1.08135e+06
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	AGEQDASIHLK	AGEQDASIHLK	2	AGEQDASIHLK2	202138	162244	147173
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	AGEQDASIHLK	AGEQDASIHLK	3	AGEQDASIHLK3	1.42065e+06	1.84657e+06	1.82173e+06
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	AGEQLAPFLPQLVPR	AGEQLAPFLPQLVPR	2	AGEQLAPFLPQLVPR2	11688.5	8545.77	
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	AGESEDLASR	AGESEDLASR	2	AGESEDLASR2	61932.5	79501.8	69169.9
Q63470	Q63470	DYR1A_RAT	Dyrk1a	Dual specificity tyrosine-phosphorylation-regulated kinase 1A	1	AGESGHTVADYLK	AGESGHTVADYLK	3	AGESGHTVADYLK3	958.166		3053.84
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	AGESPTPAGNAQPVGALKPIGNAK	AGESPTPAGNAQPVGALKPIGNAK	3	AGESPTPAGNAQPVGALKPIGNAK3	43221.1	37868.7	44178.2
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	AGESPTPAGNAQPVGALKPIGNAKPAETLK	AGESPTPAGNAQPVGALKPIGNAKPAETLK	3	AGESPTPAGNAQPVGALKPIGNAKPAETLK3	3995.39		4701.23
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	AGESPTPAGNAQPVGALKPIGNAKPAETLK	AGESPTPAGNAQPVGALKPIGNAKPAETLK	4	AGESPTPAGNAQPVGALKPIGNAKPAETLK4	40490.1	50561.6	40531.7
Q6AYT0	Q6AYT0	QOR_RAT	Cryz	Quinone oxidoreductase	1	AGESVLVHGASGGVGLATCQIAR	AGESVLVHGASGGVGLATC(UniMod:4)QIAR	3	AGESVLVHGASGGVGLATC(UniMod:4)QIAR3	3086.16		
Q9EQG6	Q9EQG6	KDIS_RAT	Kidins220	Kinase D-interacting substrate of 220 kDa	1	AGETPYNIDCSHQK	AGETPYNIDC(UniMod:4)SHQK	3	AGETPYNIDC(UniMod:4)SHQK3	4775.26		4715.31
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	AGEVINQPMMMAAR	AGEVINQPMMMAAR	2	AGEVINQPMMMAAR2	872625	844588	918574
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	AGEVINQPMMMAAR	AGEVINQPMMMAAR	3	AGEVINQPMMMAAR3	36421.2	27183.7	39571.9
B5DF55	B5DF55	B5DF55_RAT	Stam	Signal transducing adaptor molecule	1	AGEVITVLDDSDPNWWK	AGEVITVLDDSDPNWWK	2	AGEVITVLDDSDPNWWK2	19481.9	10002.6	11814.5
P01026	P01026	CO3_RAT	C3	Complement C3	1	AGEYLEASYLNLQR	AGEYLEASYLNLQR	2	AGEYLEASYLNLQR2	422507	419940	339188
P01026	P01026	CO3_RAT	C3	Complement C3	1	AGEYLEASYLNLQR	AGEYLEASYLNLQR	3	AGEYLEASYLNLQR3	76262.4	77271.4	71687.3
P01026	P01026	CO3_RAT	C3	Complement C3	1	AGEYLEASYLNLQRPYTVAIAGYALALMNK	AGEYLEASYLNLQRPYTVAIAGYALALMNK	4	AGEYLEASYLNLQRPYTVAIAGYALALMNK4	23427	27665.6	25365.7
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	AGEYMSYLLEQGLLHFFVTAR	AGEYMSYLLEQGLLHFFVTAR	3	AGEYMSYLLEQGLLHFFVTAR3	18390.5		
P68136	P60711;P63259;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	AGFAGDDAPR	AGFAGDDAPR	1	AGFAGDDAPR1	252450	176948	285141
P68136	P60711;P63259;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	AGFAGDDAPR	AGFAGDDAPR	2	AGFAGDDAPR2	63896.6	69105.5	80384.5
P85515	F7F067;P85515	ACTZ_RAT	Actr1a	Alpha-centractin	0	AGFAGDQIPK	AGFAGDQIPK	2	AGFAGDQIPK2	659642	553307	632170
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	AGFAVNFFK	AGFAVNFFK	2	AGFAVNFFK2	45870.5	61535	36167.4
B1WBY5	B1WBY5	B1WBY5_RAT	Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	1	AGFFGTIVEYGAER	AGFFGTIVEYGAER	2	AGFFGTIVEYGAER2	14768.7	17321.7	12419.4
G3V7P2	G3V7P2	G3V7P2_RAT	Fgl2	Fibrinogen-like 2	1	AGFGNLER	AGFGNLER	2	AGFGNLER2	1.78317e+06	1.91886e+06	2.22228e+06
G3V7P2	G3V7P2	G3V7P2_RAT	Fgl2	Fibrinogen-like 2	1	AGFGNLEREFWLGNDK	AGFGNLEREFWLGNDK	3	AGFGNLEREFWLGNDK3		4762.88	9275.58
Q9JLS3	Q9JLS3	TAOK2_RAT	Taok2	Serine/threonine-protein kinase TAO2	1	AGFGTEAEK	AGFGTEAEK	2	AGFGTEAEK2	20304.5	16966.2	17848.5
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	AGFHLHGNR	AGFHLHGNR	2	AGFHLHGNR2	36069	16421.4	10559.4
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	AGFHMDPHTR	AGFHMDPHTR	2	AGFHMDPHTR2	6799.18	4486	8651.13
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	AGFHMDPHTR	AGFHMDPHTR	3	AGFHMDPHTR3	92357.5	114417	86031.4
Q2QDE7	Q2QDE7	DNSL1_RAT	Dnase1l1	Deoxyribonuclease-1-like 1	1	AGFHWVIPDGEDTTVR	AGFHWVIPDGEDTTVR	3	AGFHWVIPDGEDTTVR3	14556.5	6052.26	13984
Q9Z1Z1	Q9Z1Z1	E2AK3_RAT	Eif2ak3	Eukaryotic translation initiation factor 2-alpha kinase 3	1	AGFIESTFK	AGFIESTFK	2	AGFIESTFK2	8393.89	10438.7	11834.2
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	AGFIGMPPPTLPR	AGFIGMPPPTLPR	2	AGFIGMPPPTLPR2	290038	303228	265860
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	AGFIGMPPPTLPR	AGFIGMPPPTLPR	3	AGFIGMPPPTLPR3	8095.44	10237.7	8373.11
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	AGFIQDTSLILYEEVKPNLTER	AGFIQDTSLILYEEVKPNLTER	3	AGFIQDTSLILYEEVKPNLTER3	44399.5	36699.8	49707.9
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	AGFLAFTQLPK	AGFLAFTQLPK	2	AGFLAFTQLPK2	67731.5	49486.9	53688.7
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AGFLDLK	AGFLDLK	1	AGFLDLK1	87471.7	62294.3	64105.9
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AGFLDLK	AGFLDLK	2	AGFLDLK2	2.05026e+06	1.8506e+06	1.97792e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AGFLDLKDFLPK	AGFLDLKDFLPK	2	AGFLDLKDFLPK2	30657.7	37924.5	47360.2
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AGFLDLKDFLPK	AGFLDLKDFLPK	3	AGFLDLKDFLPK3	343231	411892	594089
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	AGFLVLAVLSDGAGDHIR	AGFLVLAVLSDGAGDHIR	3	AGFLVLAVLSDGAGDHIR3	4494.01	1931.62	
B0BNA1	B0BNA1	SH3Y1_RAT	Sh3yl1	SH3 domain-containing YSC84-like protein 1	1	AGFLVTAR	AGFLVTAR	2	AGFLVTAR2	8442.15	12933.1	10036.5
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	AGFMLQEADK	AGFMLQEADK	2	AGFMLQEADK2	77978.1	89589.6	80767.6
A0A8I6ATH0	A0A8I6ATH0	A0A8I6ATH0_RAT	Braf	non-specific serine/threonine protein kinase	1	AGFQTEDFSLYACASPK	AGFQTEDFSLYAC(UniMod:4)ASPK	2	AGFQTEDFSLYAC(UniMod:4)ASPK2		1408.99	4108.24
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	AGFSETFLNEMIAPVMK	AGFSETFLNEMIAPVMK	2	AGFSETFLNEMIAPVMK2	42307.3	42252.1	42945.7
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	AGFSETFLNEMIAPVMK	AGFSETFLNEMIAPVMK	3	AGFSETFLNEMIAPVMK3	23238.4	24152	28888.2
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	AGFSGPDCSQR	AGFSGPDC(UniMod:4)SQR	2	AGFSGPDC(UniMod:4)SQR2	38452.6	44474.7	37021.6
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	AGFSHMLIQR	AGFSHMLIQR	3	AGFSHMLIQR3	33671.8	23430.7	18028.3
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	AGFSMADLQK	AGFSMADLQK	2	AGFSMADLQK2	13521.5	20199.6	10811.8
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	AGFWEEFESLQK	AGFWEEFESLQK	2	AGFWEEFESLQK2	22503.2	14921.3	10907.5
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	AGGAAEQEELHYIPIR	AGGAAEQEELHYIPIR	2	AGGAAEQEELHYIPIR2	2527.52	2118.1	2037.95
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	AGGAAEQEELHYIPIR	AGGAAEQEELHYIPIR	3	AGGAAEQEELHYIPIR3	62399	113963	68728.9
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	AGGAAGLFAK	AGGAAGLFAK	1	AGGAAGLFAK1	51599.7	48717	41532.2
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	AGGAAGLFAK	AGGAAGLFAK	2	AGGAAGLFAK2	4.74689e+06	5.29139e+06	5.91985e+06
B2RYK9	B2RYK9	B2RYK9_RAT	Dmkn	Dermokine	1	AGGADQFSQPEAAR	AGGADQFSQPEAAR	2	AGGADQFSQPEAAR2	4169.1	2107.85	2881.56
Q62876	Q62876	SNG1_RAT	Syngr1	Synaptogyrin-1	1	AGGAFDPYTLVR	AGGAFDPYTLVR	2	AGGAFDPYTLVR2	17576.8	14594.9	12362.2
B2GV06	B2GV06	SCOT1_RAT	Oxct1	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial	1	AGGAGVPAFYTSTGYGTLVQEGGSPIK	AGGAGVPAFYTSTGYGTLVQEGGSPIK	3	AGGAGVPAFYTSTGYGTLVQEGGSPIK3	53686.5	48309.8	61958.6
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	AGGAPWKPMESAVESNIGGK	AGGAPWKPMESAVESNIGGK	3	AGGAPWKPMESAVESNIGGK3	25782	18340.2	19305.7
Q8VHE9	Q8VHE9	RETST_RAT	Retsat	All-trans-retinol 13,14-reductase	1	AGGCCHTFGENGLEFDTGIHYIGR	AGGC(UniMod:4)C(UniMod:4)HTFGENGLEFDTGIHYIGR	4	AGGC(UniMod:4)C(UniMod:4)HTFGENGLEFDTGIHYIGR4			8739.25
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	AGGDAPDSSQPALDNK	AGGDAPDSSQPALDNK	2	AGGDAPDSSQPALDNK2	27247.8	30852	26571.5
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	AGGDEAK	AGGDEAK	1	AGGDEAK1	6913.03	12631.8	
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	AGGDSGNVDDDCER	AGGDSGNVDDDC(UniMod:4)ER	2	AGGDSGNVDDDC(UniMod:4)ER2			8449.04
Q62720	Q62720	ZNT1_RAT	Slc30a1	Proton-coupled zinc antiporter SLC30A1	1	AGGEAGAPPGR	AGGEAGAPPGR	2	AGGEAGAPPGR2			51684.9
P81795	C9WPN6;P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	0	AGGEAGVTLGQPHLSR	AGGEAGVTLGQPHLSR	2	AGGEAGVTLGQPHLSR2	3730.83	3657.44	5027
P81795	C9WPN6;P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	0	AGGEAGVTLGQPHLSR	AGGEAGVTLGQPHLSR	3	AGGEAGVTLGQPHLSR3	54259.9	61205.5	49541.6
P51607	P51607	RENBP_RAT	Renbp	N-acylglucosamine 2-epimerase	1	AGGEFLLSYAR	AGGEFLLSYAR	2	AGGEFLLSYAR2	3751.64	5690.19	4820.54
Q71RP1	Q71RP1	HPSE_RAT	Hpse	Heparanase	1	AGGEVIDSLTWHHYYLNGR	AGGEVIDSLTWHHYYLNGR	3	AGGEVIDSLTWHHYYLNGR3	53180.7	24424	21963.6
Q71RP1	Q71RP1	HPSE_RAT	Hpse	Heparanase	1	AGGEVIDSLTWHHYYLNGR	AGGEVIDSLTWHHYYLNGR	4	AGGEVIDSLTWHHYYLNGR4	21257.8	19299.9	17603.8
P16617	A0A8I6A6N5;P16617;M0R6Y8	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	0	AGGFLMK	AGGFLMK	1	AGGFLMK1	5043.87	3084.38	
A0A8I6AKL8	A0A8I6AKL8	A0A8I6AKL8_RAT	Xpo5	Exportin 5	1	AGGFVVGYTPSGNPVFR	AGGFVVGYTPSGNPVFR	2	AGGFVVGYTPSGNPVFR2	4785.46	6431.32	4066.51
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	AGGGEHWKPELEGK	AGGGEHWKPELEGK	3	AGGGEHWKPELEGK3	16185.6	15245.2	19224.4
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	AGGGEPPEPGGRPVLGPR	AGGGEPPEPGGRPVLGPR	3	AGGGEPPEPGGRPVLGPR3	31287.1	40927.1	28466.1
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	AGGIETIANEFSDR	AGGIETIANEFSDR	2	AGGIETIANEFSDR2	52285.7	64893.2	60588.9
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	AGGIETIANEYSDR	AGGIETIANEYSDR	2	AGGIETIANEYSDR2	521996	575158	582245
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	AGGIETIANEYSDR	AGGIETIANEYSDR	3	AGGIETIANEYSDR3	9188.41	9230.43	7041.35
Q69BT7	Q69BT7	TPPC4_RAT	Trappc4	Trafficking protein particle complex subunit 4	1	AGGLIYQWDSYSPR	AGGLIYQWDSYSPR	2	AGGLIYQWDSYSPR2	47903.5	40817.1	43893.1
D3ZZL3	D3ZZL3	D3ZZL3_RAT	Naglu	N-acetyl-alpha-glucosaminidase	1	AGGLLTYK	AGGLLTYK	2	AGGLLTYK2	26645.5	23853.3	25522.4
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	AGGLSLVVNVMQR	AGGLSLVVNVMQR	2	AGGLSLVVNVMQR2	12472.3	11431.9	5699.4
A0A8I5YC26	A0A8I5YC26	A0A8I5YC26_RAT	Mcee	Methylmalonyl CoA epimerase	1	AGGMHHVCIEVDNINAAVMDLK	AGGMHHVC(UniMod:4)IEVDNINAAVMDLK	4	AGGMHHVC(UniMod:4)IEVDNINAAVMDLK4	4595.16	4510.45	8391.46
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	AGGPDGPWGIGTPR	AGGPDGPWGIGTPR	2	AGGPDGPWGIGTPR2	4197.78	4109.53	2707.55
A0A8I5ZV49	A0A0G2JXT8;A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	0	AGGPGLER	AGGPGLER	1	AGGPGLER1	3037.46		3074.96
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AGGPGLERAEAGVPAEFGIWTR	AGGPGLERAEAGVPAEFGIWTR	3	AGGPGLERAEAGVPAEFGIWTR3	9597.57	22936	8472.74
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	AGGQLGLDHLR	AGGQLGLDHLR	2	AGGQLGLDHLR2	10509.1	11578.6	11342.9
P18421	P18421	PSB1_RAT	Psmb1	Proteasome subunit beta type-1	1	AGGSASAMLQPLLDNQVGFK	AGGSASAMLQPLLDNQVGFK	3	AGGSASAMLQPLLDNQVGFK3	1.32684e+06	1.40922e+06	1.5099e+06
P18421	P18421	PSB1_RAT	Psmb1	Proteasome subunit beta type-1	1	AGGSASAMLQPLLDNQVGFK	AGGSASAMLQPLLDNQVGFK	4	AGGSASAMLQPLLDNQVGFK4	911.494		
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	AGGTHLTLHGSK	AGGTHLTLHGSK	3	AGGTHLTLHGSK3	18696.6	14185.7	
B2RYL4	B2RYL4	B2RYL4_RAT	Armc6	Armadillo repeat containing 6	1	AGGTQSIVAAMTR	AGGTQSIVAAMTR	2	AGGTQSIVAAMTR2	21483.2	23703.8	17172.1
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	AGGTVSGEEK	AGGTVSGEEK	2	AGGTVSGEEK2			39712
D3ZY86	D3ZY86	D3ZY86_RAT	Tango2	Transport and golgi organization 2 homolog	1	AGGTWLGISTR	AGGTWLGISTR	2	AGGTWLGISTR2		3805.26	9720.25
E9PU64	E9PU64	E9PU64_RAT	Scin	Scinderin	1	AGGVASGLNHVLTNDLTAK	AGGVASGLNHVLTNDLTAK	3	AGGVASGLNHVLTNDLTAK3	8004.85		4822.99
Q02527	Q02527	MGAT3_RAT	Mgat3	Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase	1	AGGVCFKPGTR	AGGVC(UniMod:4)FKPGTR	3	AGGVC(UniMod:4)FKPGTR3	18024.6	11383.4	4428.72
D4A6E6	D4A6E6	D4A6E6_RAT	Hs6st1	Heparan-sulfate 6-O-sulfotransferase	1	AGGVEVDEDTIR	AGGVEVDEDTIR	2	AGGVEVDEDTIR2	5801.7	6414.15	9922.01
A0A8I6AKB0	A0A8I6AKB0	A0A8I6AKB0_RAT	Asmtl	Acetylserotonin O-methyltransferase-like	1	AGGYGLQAR	AGGYGLQAR	2	AGGYGLQAR2	31552.3	20410.7	20244
Q6AYA6	Q6AYA6	CYBC1_RAT	Cybc1	Cytochrome b-245 chaperone 1	1	AGHDQVVVLLK	AGHDQVVVLLK	3	AGHDQVVVLLK3	55383.6	38907.7	61272.3
Q5XI22	A0A0G2JUB4;Q5XI22	THIC_RAT	Acat2	Acetyl-CoA acetyltransferase, cytosolic	0	AGHFDKEIVPVHVSSR	AGHFDKEIVPVHVSSR	4	AGHFDKEIVPVHVSSR4	6318.27	7925.45	5422.98
D3ZL50	D3ZL50	D3ZL50_RAT	Skic3	Tetratricopeptide repeat domain 37	1	AGHHSQAVADLQAALR	AGHHSQAVADLQAALR	3	AGHHSQAVADLQAALR3	5317.65	2094.18	4000.61
A0A0G2K916	A0A0G2K916	A0A0G2K916_RAT	Ankhd1	Eukaryotic translation initiation factor 4E binding protein 3	1	AGHLCTVQFLISK	AGHLC(UniMod:4)TVQFLISK	3	AGHLC(UniMod:4)TVQFLISK3	7701.72	4856.69	4219.71
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	AGHLNANDWK	AGHLNANDWK	2	AGHLNANDWK2	17391.7	18631.9	23967.8
Q920A6	Q920A6	RISC_RAT	Scpep1	Retinoid-inducible serine carboxypeptidase	1	AGHMVPADQGDMALK	AGHMVPADQGDMALK	3	AGHMVPADQGDMALK3	13577.3	10657.7	15143.8
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	AGHQVMVFVHAR	AGHQVMVFVHAR	3	AGHQVMVFVHAR3	11551.7	2563.48	
Q64640	Q64640	ADK_RAT	Adk	Adenosine kinase	1	AGHYAASVIIR	AGHYAASVIIR	3	AGHYAASVIIR3	11426.1		10262.7
D3ZR49	D3ZR49	D3ZR49_RAT	Man1a2	alpha-1,2-Mannosidase	1	AGHYLELGAEIAR	AGHYLELGAEIAR	3	AGHYLELGAEIAR3	7445.31	6150.08	8973.14
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	AGIATHFVDSEK	AGIATHFVDSEK	2	AGIATHFVDSEK2		7045.87	4978.55
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	AGIATHFVDSEK	AGIATHFVDSEK	3	AGIATHFVDSEK3	61811.4	43747.1	41961
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	AGIDPNAITYGYYNK	AGIDPNAITYGYYNK	2	AGIDPNAITYGYYNK2	10887.1	13658.7	12809.2
D3ZXY2	D3ZXY2	D3ZXY2_RAT	Pdzd8	PDZ domain containing 8	1	AGIEDIETLENLSLDQHSK	AGIEDIETLENLSLDQHSK	3	AGIEDIETLENLSLDQHSK3	7218.68	3830.82	11727.8
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	AGIEVQEIK	AGIEVQEIK	2	AGIEVQEIK2	85693.1	92622.1	80908.5
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	AGIIQVLLEAVAIAAK	AGIIQVLLEAVAIAAK	3	AGIIQVLLEAVAIAAK3	877.364		
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	AGIISTVEVLK	AGIISTVEVLK	2	AGIISTVEVLK2	35983.8	25030	22400.2
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	AGILAIQLK	AGILAIQLK	2	AGILAIQLK2	53482.3	62661.3	57168
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	AGILPFLK	AGILPFLK	2	AGILPFLK2	9683.19	14257.9	14256.5
A0A8I5ZZZ6	A0A8I5ZZZ6	A0A8I5ZZZ6_RAT	Riok3	Serine/threonine-protein kinase RIO3	1	AGIPCPTVVLLK	AGIPC(UniMod:4)PTVVLLK	2	AGIPC(UniMod:4)PTVVLLK2	85771.9	81483.4	98904.1
P10760	P10760	SAHH_RAT	Ahcy	Adenosylhomocysteinase	1	AGIPVFAWK	AGIPVFAWK	2	AGIPVFAWK2	33303.9	34359	34088.4
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	AGIQQVYTR	AGIQQVYTR	2	AGIQQVYTR2	58317.6	68277.6	68026.2
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	AGISEAQLTDAETSK	AGISEAQLTDAETSK	2	AGISEAQLTDAETSK2	265870	256289	261645
D3ZE26	D3ZE26	D3ZE26_RAT	Tmcc2	Transmembrane and coiled-coil domain family 2	1	AGISGFGGGVVEGVK	AGISGFGGGVVEGVK	2	AGISGFGGGVVEGVK2	66142	56218.4	66177.8
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	AGITASYSEK	AGITASYSEK	2	AGITASYSEK2	30317.3	37825.4	25223.1
C0HLM6	C0HLM6	SIM20_RAT	Smim20	Small integral membrane protein 20	1	AGIVQEDVQPPGLK	AGIVQEDVQPPGLK	2	AGIVQEDVQPPGLK2	5554.76	4759.44	7976.43
A0A8I6AE35	A0A8I6AE35	A0A8I6AE35_RAT	Ube2q2	Ubiquitin conjugating enzyme E2 Q2	1	AGIYSVELINDSLYDWHVK	AGIYSVELINDSLYDWHVK	3	AGIYSVELINDSLYDWHVK3	2130.71	7568.92	2931.67
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	AGKEPGLQIWR	AGKEPGLQIWR	2	AGKEPGLQIWR2	542761	528883	544632
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	AGKEPGLQIWR	AGKEPGLQIWR	3	AGKEPGLQIWR3	1.72564e+06	2.37147e+06	2.29152e+06
P62907	F1LYQ7;A0A8I5Y9H0;P62907;A0A8I5ZVS9	RL10A_RAT	Rpl10a	Large ribosomal subunit protein uL1	0	AGKFPSLLTHNENMVAK	AGKFPSLLTHNENMVAK	3	AGKFPSLLTHNENMVAK3	2609.88	2139.83	
P62907	F1LYQ7;A0A8I5Y9H0;P62907;A0A8I5ZVS9	RL10A_RAT	Rpl10a	Large ribosomal subunit protein uL1	0	AGKFPSLLTHNENMVAK	AGKFPSLLTHNENMVAK	4	AGKFPSLLTHNENMVAK4	3537.86	7888.41	9119.24
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	AGKPVICATQMLESMIK	AGKPVIC(UniMod:4)ATQMLESMIK	2	AGKPVIC(UniMod:4)ATQMLESMIK2	18152.5	23567.1	20654.3
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	AGKPVICATQMLESMIK	AGKPVIC(UniMod:4)ATQMLESMIK	3	AGKPVIC(UniMod:4)ATQMLESMIK3	92930	79672.5	100885
D4A0G7	D4A0G7	D4A0G7_RAT	Rab37	RAB37, member RAS oncogene family	1	AGKQPDEPSFQIR	AGKQPDEPSFQIR	3	AGKQPDEPSFQIR3	31278.1	44730.1	35622.8
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	AGLAASIAGSSIINK	AGLAASIAGSSIINK	2	AGLAASIAGSSIINK2	48833.2	46833.4	40283.6
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	AGLAASIAGSSIINK	AGLAASIAGSSIINK	3	AGLAASIAGSSIINK3	2933.8	4955.1	3725.57
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	AGLAPLEVR	AGLAPLEVR	2	AGLAPLEVR2	14478.1	12241.4	14020.9
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	AGLAVQRPEAAEQR	AGLAVQRPEAAEQR	3	AGLAVQRPEAAEQR3	103615	110866	97471.8
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	AGLDAIGNR	AGLDAIGNR	2	AGLDAIGNR2	1.44787e+06	1.5684e+06	1.28365e+06
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	AGLDAIGNRK	AGLDAIGNRK	2	AGLDAIGNRK2	73942.4	100588	76211.2
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	AGLDGSER	AGLDGSER	2	AGLDGSER2	52037.1	65257.7	
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	AGLECSDIEK	AGLEC(UniMod:4)SDIEK	2	AGLEC(UniMod:4)SDIEK2	433356	425094	443757
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	AGLEDECK	AGLEDEC(UniMod:4)K	2	AGLEDEC(UniMod:4)K2	12948.2	14358.5	14604.1
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	AGLEDIEEGGEEEAEMGAEDK	AGLEDIEEGGEEEAEMGAEDK	3	AGLEDIEEGGEEEAEMGAEDK3	83278.3	330647	341929
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	AGLEDIEEGGEEEAEMGAEDKNH	AGLEDIEEGGEEEAEMGAEDKNH	3	AGLEDIEEGGEEEAEMGAEDKNH3	3.12421e+06	3.64337e+06	3.53971e+06
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	AGLEDIEEGGEEEAEMGAEDKNH	AGLEDIEEGGEEEAEMGAEDKNH	4	AGLEDIEEGGEEEAEMGAEDKNH4	15129.3	18464.9	29856.8
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	AGLEEVR	AGLEEVR	2	AGLEEVR2	39397.8	42469.1	43416.6
Q9Z1L0	Q9Z1L0	PK3CB_RAT	Pik3cb	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform	1	AGLFHGTELLCK	AGLFHGTELLC(UniMod:4)K	3	AGLFHGTELLC(UniMod:4)K3	14324.6	18725.7	19366.3
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	AGLFLEGQIHPELEGVEIVISEK	AGLFLEGQIHPELEGVEIVISEK	3	AGLFLEGQIHPELEGVEIVISEK3	38207.3		48788.9
M0R915	M0R915;A0A8I6GLQ4	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	0	AGLFYTGK	AGLFYTGK	2	AGLFYTGK2	71305.4	70823.4	81485
D3Z7Z5	D3Z7Z5	D3Z7Z5_RAT	Ranbp10	RAN binding protein 10	1	AGLGSCSFAR	AGLGSC(UniMod:4)SFAR	2	AGLGSC(UniMod:4)SFAR2	13354	13148.5	9488.21
M0RA86	M0RA86	M0RA86_RAT	Ccdc9	Coiled-coil domain containing 9	1	AGLGSGGDMTMSMTGR	AGLGSGGDMTMSMTGR	2	AGLGSGGDMTMSMTGR2	1745.34	4361.66	2780
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	AGLILFGNDDR	AGLILFGNDDR	2	AGLILFGNDDR2	20224.8	31299.1	24767.8
Q9WV97	Q9WV97	TIM9_RAT	Timm9	Mitochondrial import inner membrane translocase subunit Tim9	1	AGLLGQPR	AGLLGQPR	2	AGLLGQPR2	62940.8	51798.2	62577.5
P51646	P51646	ARL5A_RAT	Arl5a	ADP-ribosylation factor-like protein 5A	1	AGLLIFANK	AGLLIFANK	2	AGLLIFANK2	34964.9	23887.5	26242
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	AGLLLPGAGATLYR	AGLLLPGAGATLYR	2	AGLLLPGAGATLYR2			21783.4
D3ZAU0	D3ZAU0	D3ZAU0_RAT	Muc5b	Mucin 5B, oligomeric mucus/gel-forming	1	AGLLMEK	AGLLMEK	1	AGLLMEK1	23760.5	17226.6	15126
P56522	P56522	ADRO_RAT	Fdxr	NADPH:adrenodoxin oxidoreductase, mitochondrial	1	AGLLPSGPRPGYTAIQALLSDR	AGLLPSGPRPGYTAIQALLSDR	3	AGLLPSGPRPGYTAIQALLSDR3	55886.8	48466.1	54616.2
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	AGLLRPDYK	AGLLRPDYK	2	AGLLRPDYK2	67166.7	55666.1	53851.3
D3ZW38	D3ZW38	D3ZW38_RAT	Exosc6	Exosome component 6	1	AGLLSQAK	AGLLSQAK	2	AGLLSQAK2	6357.49	7085.05	
Q63616	Q63616	VP33B_RAT	Vps33b	Vacuolar protein sorting-associated protein 33B	1	AGLLTEQASGDTLTAVENK	AGLLTEQASGDTLTAVENK	2	AGLLTEQASGDTLTAVENK2	957.496		
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	AGLNCSTETMPIK	AGLNC(UniMod:4)STETMPIK	2	AGLNC(UniMod:4)STETMPIK2	266430	253468	235207
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	AGLNQEWSLIR	AGLNQEWSLIR	2	AGLNQEWSLIR2	10979.5	7425.76	13778.3
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	AGLNQNMDAITEELQAK	AGLNQNMDAITEELQAK	2	AGLNQNMDAITEELQAK2	18575.5	15870	14615.3
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	AGLNQNMDAITEELQAK	AGLNQNMDAITEELQAK	3	AGLNQNMDAITEELQAK3	6024.16	9329.18	7317.15
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	AGLPCQDLEFVQFHPTGIYGAGCLITEGCR	AGLPC(UniMod:4)QDLEFVQFHPTGIYGAGC(UniMod:4)LITEGC(UniMod:4)R	4	AGLPC(UniMod:4)QDLEFVQFHPTGIYGAGC(UniMod:4)LITEGC(UniMod:4)R4	8274.36	12783.3	9866.76
O88917	O88917	AGRL1_RAT	Adgrl1	Adhesion G protein-coupled receptor L1	1	AGLPFGLMR	AGLPFGLMR	2	AGLPFGLMR2		10180.8	8769.1
B1WBY5	B1WBY5	B1WBY5_RAT	Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	1	AGLPGFYDPCVGEEK	AGLPGFYDPC(UniMod:4)VGEEK	2	AGLPGFYDPC(UniMod:4)VGEEK2	38379.7	38618.1	32956.9
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	AGLPLPAALAFVPR	AGLPLPAALAFVPR	2	AGLPLPAALAFVPR2	55147	62952	62883.1
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	AGLPLPAALAFVPR	AGLPLPAALAFVPR	3	AGLPLPAALAFVPR3	1832.91	5638.51	6474.1
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	AGLQAFFQVR	AGLQAFFQVR	2	AGLQAFFQVR2	1.0038e+06	618470	549684
A9UMV8;P02262;P0C169;P0C170;P0CC09;Q00728;Q4FZT6;Q64598	Q00728;Q64598;D3ZVK7;Q4FZT6;P0C169;P0C170;A9UMV8;A0A8I6AWT3;P02262;D4AEC0;D3ZXP3;G3V9C0;A0A8I5ZYY0;M0RDM4;Q6I8Q6;A0A8I5ZZV2;P0C0S7;P0CC09;A0A8I6ARS7;A0A8I6ASE8;A0A8L2QLK6	H2A1C_RAT;H2A1E_RAT;H2A1F_RAT;H2A1_RAT;H2A2A_RAT;H2A3_RAT;H2A4_RAT;H2AJ_RAT	H2ac18;H2ac25;H2aj	Histone H2A.J	0	AGLQFPVGR	AGLQFPVGR	2	AGLQFPVGR2	171347	94897.1	92878.8
F7EYC4	F7EYC4	F7EYC4_RAT	Tom1	Target of myb1 membrane trafficking protein	1	AGLQSLEASGHLEDDFDMFALTR	AGLQSLEASGHLEDDFDMFALTR	3	AGLQSLEASGHLEDDFDMFALTR3	12973.1	18721.2	8822.11
Q4KLH5	Q4KLH5	AGFG1_RAT	Agfg1	Arf-GAP domain and FG repeat-containing protein 1	1	AGLQTADK	AGLQTADK	2	AGLQTADK2	40155.3	31854.9	30097.5
B0BNB9	B0BNB9	B0BNB9_RAT	Htra2	HtrA serine peptidase 2	1	AGLRPADVILAIGEK	AGLRPADVILAIGEK	3	AGLRPADVILAIGEK3	48568.3	48449	37232.7
D3ZEE4	D3ZEE4	D3ZEE4_RAT	Plxdc1	Plexin domain containing 1	1	AGLSDAFMILNSSPEVPESR	AGLSDAFMILNSSPEVPESR	3	AGLSDAFMILNSSPEVPESR3	41842.2	36262.9	32482.8
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	AGLSLQQAQEGWFALTGSELR	AGLSLQQAQEGWFALTGSELR	3	AGLSLQQAQEGWFALTGSELR3	27513.9	26039.4	39121.6
F1LTX4	F1LTX4	F1LTX4_RAT	Lrrn4	Leucine rich repeat neuronal 4	1	AGLSQPQTSGWGR	AGLSQPQTSGWGR	2	AGLSQPQTSGWGR2	22956.3	18154.2	28852
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	AGLSQSLFER	AGLSQSLFER	2	AGLSQSLFER2	21055.3	24469.9	23229.6
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	AGLSSGFVGCVR	AGLSSGFVGC(UniMod:4)VR	2	AGLSSGFVGC(UniMod:4)VR2	22629.1	23183.4	13373.3
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	AGLSTSPSAIASTSER	AGLSTSPSAIASTSER	2	AGLSTSPSAIASTSER2	6064.19	3397.47	2324.09
A0A8I6GIH3	A0A8I6GIH3	A0A8I6GIH3_RAT	Pigt	Phosphatidylinositol glycan anchor biosynthesis, class T	1	AGLSVLLK	AGLSVLLK	2	AGLSVLLK2	5780.14	5999.92	4360.13
A0A0G2JTY3	A0A0G2JTY3	A0A0G2JTY3_RAT	Slc37a4	Solute carrier family 37 member 4	1	AGLSVYGNPR	AGLSVYGNPR	2	AGLSVYGNPR2		22043.7	23167.6
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	AGLTFNHEPPLSQNQR	AGLTFNHEPPLSQNQR	3	AGLTFNHEPPLSQNQR3	22433.5	17781.4	18917
Q63468	Q63468	KPRA_RAT	Prpsap1	Phosphoribosyl pyrophosphate synthase-associated protein 1	1	AGLTHIITMDLHQK	AGLTHIITMDLHQK	3	AGLTHIITMDLHQK3		3676.45	2452.83
Q63468	Q63468	KPRA_RAT	Prpsap1	Phosphoribosyl pyrophosphate synthase-associated protein 1	1	AGLTHIITMDLHQK	AGLTHIITMDLHQK	4	AGLTHIITMDLHQK4	3783.64	1439.18	
O08618	O08618	KPRB_RAT	Prpsap2	Phosphoribosyl pyrophosphate synthase-associated protein 2	1	AGLTHLITMDLHQK	AGLTHLITMDLHQK	3	AGLTHLITMDLHQK3	7921.27		
O08618	O08618	KPRB_RAT	Prpsap2	Phosphoribosyl pyrophosphate synthase-associated protein 2	1	AGLTHLITMDLHQK	AGLTHLITMDLHQK	4	AGLTHLITMDLHQK4	3487.67		2702.95
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	AGLTMNDIDAFEFHEAFSGQILANFK	AGLTMNDIDAFEFHEAFSGQILANFK	3	AGLTMNDIDAFEFHEAFSGQILANFK3	7586.05		
P30427	P30427	PLEC_RAT	Plec	Plectin	1	AGLVGPEMHEK	AGLVGPEMHEK	3	AGLVGPEMHEK3	7607.63		5338.14
D4A104	D4A104	D4A104_RAT	Mrpl45	Mitochondrial ribosomal protein L45	1	AGLVIPQER	AGLVIPQER	2	AGLVIPQER2	13095.3	11706.3	
Q498T9	Q498T9	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	1	AGLVVEDALFETLPSDVR	AGLVVEDALFETLPSDVR	2	AGLVVEDALFETLPSDVR2	5021.82	4615.97	
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	AGLYGLPK	AGLYGLPK	2	AGLYGLPK2	63163.6	54866.2	61379.8
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	AGLYLQQMPHPCYVDDVFLR	AGLYLQQMPHPC(UniMod:4)YVDDVFLR	3	AGLYLQQMPHPC(UniMod:4)YVDDVFLR3		20713.1	14666.8
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	AGMAAVASPTSNCDLESFAQTLK	AGMAAVASPTSNC(UniMod:4)DLESFAQTLK	3	AGMAAVASPTSNC(UniMod:4)DLESFAQTLK3	10335.3	4973.16	4641.58
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	AGMAAVASPTSNCDLESFAQTLKK	AGMAAVASPTSNC(UniMod:4)DLESFAQTLKK	3	AGMAAVASPTSNC(UniMod:4)DLESFAQTLKK3	13386.3	18721.1	28053.6
P24473	P24473	GSTK1_RAT	Gstk1	Glutathione S-transferase kappa 1	1	AGMATAQAQHLLNK	AGMATAQAQHLLNK	2	AGMATAQAQHLLNK2	4344.81	6968.06	2368.76
P24473	P24473	GSTK1_RAT	Gstk1	Glutathione S-transferase kappa 1	1	AGMATAQAQHLLNK	AGMATAQAQHLLNK	3	AGMATAQAQHLLNK3	34214.6	36164.4	35940
B2RZ77	B2RZ77	B2RZ77_RAT	Dpt	Dermatopontin	1	AGMEWYQK	AGMEWYQK	2	AGMEWYQK2	923025	1.08132e+06	1.16095e+06
A0A8I5ZKU9	A0A8I5ZKU9	A0A8I5ZKU9_RAT	Shmt1	Serine hydroxymethyltransferase	1	AGMIFYR	AGMIFYR	2	AGMIFYR2	14457.1	16482.9	17764
A0A8I6GBD2	A0A8I6GBD2	A0A8I6GBD2_RAT	Actr10	Actin related protein 10	1	AGMSKPIK	AGMSKPIK	2	AGMSKPIK2	4626.46		2469.72
F7ELS2	A0A8I6AGL9;F7ELS2	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	0	AGMSSLKG	AGMSSLKG	1	AGMSSLKG1	1788.53		4350.03
P21531	P21531	RL3_RAT	Rpl3	Large ribosomal subunit protein uL3	1	AGMTHIVR	AGMTHIVR	2	AGMTHIVR2	7857.36	6830.33	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	AGNELLESSAGDDASSLR	AGNELLESSAGDDASSLR	2	AGNELLESSAGDDASSLR2	17542.2	27180.3	25210.2
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	AGNELLESSAGDDASSLR	AGNELLESSAGDDASSLR	3	AGNELLESSAGDDASSLR3	5862.48	4756.85	12253.2
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	AGNESPVQELR	AGNESPVQELR	2	AGNESPVQELR2	185403	195917	202283
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	AGNFIGWLHMDGANLSVLLVEHALSK	AGNFIGWLHMDGANLSVLLVEHALSK	4	AGNFIGWLHMDGANLSVLLVEHALSK4	11912.4	11760.9	6942.95
P05426	P05426;F1LUE9	RL7_RAT	Rpl7	Large ribosomal subunit protein uL30	0	AGNFYVPAEPK	AGNFYVPAEPK	2	AGNFYVPAEPK2	30671.3	24261.7	47072.2
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	AGNGQEATITVK	AGNGQEATITVK	2	AGNGQEATITVK2	21085.1	20107.2	31087.3
E9PT66	E9PT66	E9PT66_RAT	Sf3b3	Splicing factor 3b, subunit 3	1	AGNGQWASVIR	AGNGQWASVIR	2	AGNGQWASVIR2		2113.71	4126.88
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	AGNILFTLDGDIK	AGNILFTLDGDIK	2	AGNILFTLDGDIK2	86279.3	98034.6	66891.4
O54748	O54748;A0A8I6A0F8	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	0	AGNILLNTEGHAK	AGNILLNTEGHAK	2	AGNILLNTEGHAK2	56832.6	52866.7	45873.8
O54748	O54748;A0A8I6A0F8	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	0	AGNILLNTEGHAK	AGNILLNTEGHAK	3	AGNILLNTEGHAK3	205509	230732	217978
Q9JLS3	Q9JLS3	TAOK2_RAT	Taok2	Serine/threonine-protein kinase TAO2	1	AGNILLSEPGLVK	AGNILLSEPGLVK	2	AGNILLSEPGLVK2	10556	9548.04	13072.1
Q53UA7	O88664;Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	0	AGNILLTEPGQVK	AGNILLTEPGQVK	2	AGNILLTEPGQVK2	190148	213964	184864
Q53UA7	O88664;Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	0	AGNILLTEPGQVK	AGNILLTEPGQVK	3	AGNILLTEPGQVK3	6422.52	9588.95	6415.88
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	AGNIPALVR	AGNIPALVR	2	AGNIPALVR2	32875.7	32882.7	39532.5
P47198	A0A8I6A3R9;P47198	RL22_RAT	Rpl22	Large ribosomal subunit protein eL22	0	AGNLGGGVVTIER	AGNLGGGVVTIER	2	AGNLGGGVVTIER2	42598.4	49203.2	42730.4
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	AGNMGVGMEDGERPR	AGNMGVGMEDGERPR	3	AGNMGVGMEDGERPR3	29514.3	42204.2	27651.6
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AGNNMLLVGVHGPR	AGNNMLLVGVHGPR	2	AGNNMLLVGVHGPR2	685728	618944	573765
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AGNNMLLVGVHGPR	AGNNMLLVGVHGPR	3	AGNNMLLVGVHGPR3	41164.3	51641.9	38178.5
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	AGNQTGLYVLR	AGNQTGLYVLR	2	AGNQTGLYVLR2	34792.5	40897.2	44493.6
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	AGNSLAASTAEETAGSAQSR	AGNSLAASTAEETAGSAQSR	2	AGNSLAASTAEETAGSAQSR2	1077.33		
P32198	P32198	CPT1A_RAT	Cpt1a	Carnitine O-palmitoyltransferase 1, liver isoform	1	AGNTIHAILLYR	AGNTIHAILLYR	3	AGNTIHAILLYR3	12554.3	14304.2	27340.3
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	AGNTQGDFYIR	AGNTQGDFYIR	2	AGNTQGDFYIR2	273601	277096	270929
B2GV06	B2GV06	SCOT1_RAT	Oxct1	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial	1	AGNVIFR	AGNVIFR	2	AGNVIFR2	295193	271236	279397
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	AGNVLMTLEGDIR	AGNVLMTLEGDIR	2	AGNVLMTLEGDIR2	67778.1	71538	54785.3
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	AGNVLMTLEGDIR	AGNVLMTLEGDIR	3	AGNVLMTLEGDIR3	2311.19	1638.1	
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	AGNWAAIYQDIR	AGNWAAIYQDIR	2	AGNWAAIYQDIR2	162752	153193	168429
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	AGNWAAIYQDIR	AGNWAAIYQDIR	3	AGNWAAIYQDIR3	1705	1290.01	3298.26
Q5U2X5	Q5U2X5	ACK1_RAT	Tnk2	Activated CDC42 kinase 1	1	AGPCILPIVR	AGPC(UniMod:4)ILPIVR	2	AGPC(UniMod:4)ILPIVR2	2331.97	4442.36	6601.51
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	AGPDLASCLDIDECR	AGPDLASC(UniMod:4)LDIDEC(UniMod:4)R	2	AGPDLASC(UniMod:4)LDIDEC(UniMod:4)R2	40904.9	47520.8	35248.7
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	AGPDLASCLDIDECR	AGPDLASC(UniMod:4)LDIDEC(UniMod:4)R	3	AGPDLASC(UniMod:4)LDIDEC(UniMod:4)R3	3122.63	5620.33	5727.33
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	AGPDLASCLDIDECRER	AGPDLASC(UniMod:4)LDIDEC(UniMod:4)RER	3	AGPDLASC(UniMod:4)LDIDEC(UniMod:4)RER3	152047	186802	164465
A0A0G2KAF4	A0A0G2KAF4	A0A0G2KAF4_RAT	Nfxl1	Nuclear transcription factor, X-box binding-like 1	1	AGPECLQCEEGCSK	AGPEC(UniMod:4)LQC(UniMod:4)EEGC(UniMod:4)SK	2	AGPEC(UniMod:4)LQC(UniMod:4)EEGC(UniMod:4)SK2	7079.51	4299.93	9633.76
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	AGPEENLIPEAQATSR	AGPEENLIPEAQATSR	2	AGPEENLIPEAQATSR2	15774.1	8448.61	13066.5
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	AGPELELTR	AGPELELTR	2	AGPELELTR2	53809.8	76416.3	74356.8
Q5U2V8	Q5U2V8	EMC3_RAT	Emc3	ER membrane protein complex subunit 3	1	AGPELLLDSNIR	AGPELLLDSNIR	2	AGPELLLDSNIR2	4071.91	3754.79	6870.23
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	AGPENPGSACR	AGPENPGSAC(UniMod:4)R	2	AGPENPGSAC(UniMod:4)R2	3.94943e+06		3.77131e+06
Q9JJW3	Q9JJW3;A0A8L2QV13	ATPMK_RAT	Atp5mk	ATP synthase membrane subunit K, mitochondrial	0	AGPESDGQFQFTGIK	AGPESDGQFQFTGIK	2	AGPESDGQFQFTGIK2	180500	180857	180043
Q9JJW3	Q9JJW3;A0A8L2QV13	ATPMK_RAT	Atp5mk	ATP synthase membrane subunit K, mitochondrial	0	AGPESDGQFQFTGIK	AGPESDGQFQFTGIK	3	AGPESDGQFQFTGIK3	11579.5	12706.4	11867.1
Q9JJW3	Q9JJW3;A0A8L2QV13	ATPMK_RAT	Atp5mk	ATP synthase membrane subunit K, mitochondrial	0	AGPESDGQFQFTGIKK	AGPESDGQFQFTGIKK	3	AGPESDGQFQFTGIKK3	43327.7	53808.1	56561.5
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	AGPESSSAYSIR	AGPESSSAYSIR	2	AGPESSSAYSIR2	15381.2	15243.7	14401.8
Q8K3P7	Q8K3P7	HINT3_RAT	Hint3	Adenosine 5'-monophosphoramidase HINT3	1	AGPEVSSPGTSESR	AGPEVSSPGTSESR	2	AGPEVSSPGTSESR2	63155.9	60941.4	56213.4
Q68SB1	Q68SB1	STAU2_RAT	Stau2	Double-stranded RNA-binding protein Staufen homolog 2	1	AGPEYGQGMNPISR	AGPEYGQGMNPISR	2	AGPEYGQGMNPISR2	3379.91	8700.32	3131.43
A0A8I6GBQ0	A0A8I6GBQ0	A0A8I6GBQ0_RAT	Stk26	Protein kinase domain-containing protein	1	AGPFDEFQIATMLK	AGPFDEFQIATMLK	2	AGPFDEFQIATMLK2	78196	58186.8	40754.2
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	AGPGEEFEK	AGPGEEFEK	2	AGPGEEFEK2	14987.9	19692.9	
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	AGPGPGAALESPR	AGPGPGAALESPR	2	AGPGPGAALESPR2	2964.87	5772.61	
Q642B4	Q642B4	Q642B4_RAT	Clec14a	C-type lectin domain containing 14A	1	AGPGPGGGSK	AGPGPGGGSK	2	AGPGPGGGSK2			1361.81
P06765	P06765	PLF4_RAT	Pf4	Platelet factor 4	1	AGPHCAVPQLIATLK	AGPHC(UniMod:4)AVPQLIATLK	2	AGPHC(UniMod:4)AVPQLIATLK2	1.62245e+06	1.42057e+06	1.52064e+06
P06765	P06765	PLF4_RAT	Pf4	Platelet factor 4	1	AGPHCAVPQLIATLK	AGPHC(UniMod:4)AVPQLIATLK	3	AGPHC(UniMod:4)AVPQLIATLK3	3.90826e+07	3.70876e+07	3.93596e+07
P06765	P06765	PLF4_RAT	Pf4	Platelet factor 4	1	AGPHCAVPQLIATLK	AGPHC(UniMod:4)AVPQLIATLK	4	AGPHC(UniMod:4)AVPQLIATLK4	54779.1	52166.2	61990.9
P06765	P06765	PLF4_RAT	Pf4	Platelet factor 4	1	AGPHCAVPQLIATLKNGSK	AGPHC(UniMod:4)AVPQLIATLKNGSK	3	AGPHC(UniMod:4)AVPQLIATLKNGSK3	10704.1		16166.9
Q7TP47	Q566E4;Q7TP47;A0A8I5ZQ92	HNRPQ_RAT	Syncrip	Heterogeneous nuclear ribonucleoprotein Q	0	AGPIWDLR	AGPIWDLR	2	AGPIWDLR2	55002.9	49988.8	35381.5
Q9WUD9	Q9WUD9	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	1	AGPLAGGVTTFVALYDYESR	AGPLAGGVTTFVALYDYESR	3	AGPLAGGVTTFVALYDYESR3	24617.9	25541.7	26338.6
G3V728	G3V728	G3V728_RAT	Nipsnap1	Nipsnap homolog 1	1	AGPNIYELR	AGPNIYELR	2	AGPNIYELR2	57688.2	67769.4	50002.5
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	AGPQTPVHCHQK	AGPQTPVHC(UniMod:4)HQK	2	AGPQTPVHC(UniMod:4)HQK2			33337.8
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	AGPQTPVHCHQK	AGPQTPVHC(UniMod:4)HQK	3	AGPQTPVHC(UniMod:4)HQK3			25481.2
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	AGPSAQSEGEK	AGPSAQSEGEK	2	AGPSAQSEGEK2			16749
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	AGPSDMELLFDVFLETVR	AGPSDMELLFDVFLETVR	3	AGPSDMELLFDVFLETVR3		1919.9	3361.67
Q9JKC9	Q9JKC9	SYNRG_RAT	Synrg	Synergin gamma	1	AGPSLEEK	AGPSLEEK	2	AGPSLEEK2	23087	19157.5	13579.1
A0A8J8YPH6	A0A8J8YPH6	A0A8J8YPH6_RAT	Hps4	HPS4, biogenesis of lysosomal organelles complex 3 subunit 2	1	AGPTGLCTEACDR	AGPTGLC(UniMod:4)TEAC(UniMod:4)DR	2	AGPTGLC(UniMod:4)TEAC(UniMod:4)DR2	13366.1	20134.1	19606.4
Q99MM4	Q99MM4	TRAD1_RAT	Trafd1	TRAF-type zinc finger domain-containing protein 1	1	AGPTSLGDIK	AGPTSLGDIK	2	AGPTSLGDIK2	9519.05	16258.4	8829.68
Q76GL9	Q76GL9	Q76GL9_RAT	Slc1a4	Amino acid transporter	1	AGPVAVAPELESK	AGPVAVAPELESK	2	AGPVAVAPELESK2	36254.9	22464.2	26522.8
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	AGPVETPGQAMPVDPGSVR	AGPVETPGQAMPVDPGSVR	2	AGPVETPGQAMPVDPGSVR2	27333.4	13720.7	17286.3
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	AGQAATLALGDFDR	AGQAATLALGDFDR	2	AGQAATLALGDFDR2	80937	93920.4	84178.5
Q62714	Q62714	DEF4_RAT	Np4	Defensin alpha 4	1	AGQACYCR	AGQAC(UniMod:4)YC(UniMod:4)R	2	AGQAC(UniMod:4)YC(UniMod:4)R2			7475.03
A0A8I5ZU98	A0A8I5ZU98	A0A8I5ZU98_RAT	Osbpl5	Oxysterol-binding protein	1	AGQAPAPGLLQNPR	AGQAPAPGLLQNPR	2	AGQAPAPGLLQNPR2		3481.49	1787.3
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	AGQAQAELEMQYGTLQQR	AGQAQAELEMQYGTLQQR	3	AGQAQAELEMQYGTLQQR3	7529.1	8074.49	13739.6
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	AGQAVDDFIEK	AGQAVDDFIEK	2	AGQAVDDFIEK2	82653.3	79687.4	102127
B1WBZ6	B1WBZ6	B1WBZ6_RAT	RGD1565685	RGD1565685 protein	1	AGQCLLLLR	AGQC(UniMod:4)LLLLR	2	AGQC(UniMod:4)LLLLR2	13053.9	14593.3	17184.2
F7EXX5	F7EXX5	F7EXX5_RAT	Irf3	Interferon regulatory factor 3	1	AGQCLWAQR	AGQC(UniMod:4)LWAQR	2	AGQC(UniMod:4)LWAQR2	7881.85	4774.97	7190.56
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	AGQCVCVEGFR	AGQC(UniMod:4)VC(UniMod:4)VEGFR	2	AGQC(UniMod:4)VC(UniMod:4)VEGFR2	15095.5	14961.3	8449.96
D3ZRX9	D3ZRX9	D3ZRX9_RAT	Cnn2	Calponin	1	AGQCVIGLQMGTNK	AGQC(UniMod:4)VIGLQMGTNK	2	AGQC(UniMod:4)VIGLQMGTNK2	620032	554373	625872
D3ZRX9	D3ZRX9	D3ZRX9_RAT	Cnn2	Calponin	1	AGQCVIGLQMGTNK	AGQC(UniMod:4)VIGLQMGTNK	3	AGQC(UniMod:4)VIGLQMGTNK3	145908	163257	148672
D3ZIT4	D3ZIT4	D3ZIT4_RAT	Anapc7	Anaphase promoting complex subunit 7	1	AGQERPSVTSYK	AGQERPSVTSYK	3	AGQERPSVTSYK3	10196.2	9018.3	10996.3
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	AGQGAVYTR	AGQGAVYTR	2	AGQGAVYTR2	8255.44	16085.1	8227.22
Q66H91	Q66H91	GIT2_RAT	Git2	ARF GTPase-activating protein GIT2	1	AGQILQAELLAVYGADPGTHDSSGK	AGQILQAELLAVYGADPGTHDSSGK	3	AGQILQAELLAVYGADPGTHDSSGK3	15251.3	11858.4	16521.4
Q62720	Q62720	ZNT1_RAT	Slc30a1	Proton-coupled zinc antiporter SLC30A1	1	AGQLNMR	AGQLNMR	2	AGQLNMR2	46736.6	33933.7	51795
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	AGQLSYK	AGQLSYK	2	AGQLSYK2	7936.02	3296.62	4538.23
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	AGQPIDLSK	AGQPIDLSK	2	AGQPIDLSK2	138814	156526	136047
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	AGQPLPLTLPPELVPPSFR	AGQPLPLTLPPELVPPSFR	3	AGQPLPLTLPPELVPPSFR3		5136.38	9171.27
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	AGQQEGFR	AGQQEGFR	2	AGQQEGFR2	8618.4	10284.3	6879.09
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	AGQQEGFREPGLK	AGQQEGFREPGLK	3	AGQQEGFREPGLK3	82089.6	91390.2	90564.4
D3ZKG1	D3ZKG1	D3ZKG1_RAT	Mmut	Methylmalonyl-CoA mutase, mitochondrial	1	AGQQGLSVAFDLATHR	AGQQGLSVAFDLATHR	3	AGQQGLSVAFDLATHR3	8587.14	3015.1	4644.29
D4A8G9	D4A8G9	ZFY26_RAT	Zfyve26	Zinc finger FYVE domain-containing protein 26	1	AGQSQDLALCDSYISK	AGQSQDLALC(UniMod:4)DSYISK	2	AGQSQDLALC(UniMod:4)DSYISK2		3557.06	
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	AGQTLSQDLFR	AGQTLSQDLFR	2	AGQTLSQDLFR2	40177.7	31463.3	28198.7
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	AGQTTYSGVIDCFR	AGQTTYSGVIDC(UniMod:4)FR	2	AGQTTYSGVIDC(UniMod:4)FR2	29627	15996.4	8488.51
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	AGQTTYSGVTDCFR	AGQTTYSGVTDC(UniMod:4)FR	2	AGQTTYSGVTDC(UniMod:4)FR2	80152	79248.8	88010.4
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	AGQTTYSGVTDCFRK	AGQTTYSGVTDC(UniMod:4)FRK	3	AGQTTYSGVTDC(UniMod:4)FRK3	11875.2		12597.7
D3ZLC1	D3ZLC1	D3ZLC1_RAT	Lmnb2	Lamin B2	1	AGQTVTVWAAGAGATHSPPSTLVWK	AGQTVTVWAAGAGATHSPPSTLVWK	3	AGQTVTVWAAGAGATHSPPSTLVWK3	1500.07		
P70569	P70569;Q9QYF3;F1M111	MYO5B_RAT	Myo5b	Unconventional myosin-Vb	0	AGQVAYLEK	AGQVAYLEK	2	AGQVAYLEK2	15016.3	22301.3	11792.4
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	AGQVFLEELGNHK	AGQVFLEELGNHK	2	AGQVFLEELGNHK2	12380.9	7895.42	9734.03
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	AGQVFLEELGNHK	AGQVFLEELGNHK	3	AGQVFLEELGNHK3	64610.5	44461.3	64278.9
A0A8I6GK59	A0A8I6GK59	A0A8I6GK59_RAT	Bmp2k	BMP-2 inducible kinase	1	AGQVVNQMNK	AGQVVNQMNK	2	AGQVVNQMNK2	16663.4	10061.8	16993.7
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	AGQVVTIWASGAGATHSPPTDLVWK	AGQVVTIWASGAGATHSPPTDLVWK	3	AGQVVTIWASGAGATHSPPTDLVWK3	26872.3	32421.4	33987.4
D3ZCW5	D3ZCW5	D3ZCW5_RAT	Alg9	Mannosyltransferase	1	AGQVWAPEGSTAFK	AGQVWAPEGSTAFK	2	AGQVWAPEGSTAFK2	9289.06	6597.59	9928.24
P01026	P01026	CO3_RAT	C3	Complement C3	1	AGQYTDK	AGQYTDK	1	AGQYTDK1			16889.3
P01026	P01026	CO3_RAT	C3	Complement C3	1	AGQYTDK	AGQYTDK	2	AGQYTDK2			32636.5
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	AGRPQFDDQGK	AGRPQFDDQGK	3	AGRPQFDDQGK3	42044.7	44193.1	37017.1
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	AGRPQFDK	AGRPQFDK	2	AGRPQFDK2	3220.82	16450.3	7941.7
D4ABB8	D4ABB8	ATP9B_RAT	Atp9b	Probable phospholipid-transporting ATPase IIB	1	AGSCFIR	AGSC(UniMod:4)FIR	2	AGSC(UniMod:4)FIR2	5139.33	10275.5	9689.99
Q5HZW5	Q5HZW5	CD320_RAT	Cd320	CD320 antigen	1	AGSCPTDTFK	AGSC(UniMod:4)PTDTFK	2	AGSC(UniMod:4)PTDTFK2	10959.9	7867.48	9052.81
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	AGSCWQDPLAEALSR	AGSC(UniMod:4)WQDPLAEALSR	2	AGSC(UniMod:4)WQDPLAEALSR2	18255.3	19459.7	20211.5
Q9Z0W7	Q9Z0W7;Q811Q2	CLIC4_RAT	Clic4	Chloride intracellular channel protein 4	0	AGSDGESIGNCPFSQR	AGSDGESIGNC(UniMod:4)PFSQR	2	AGSDGESIGNC(UniMod:4)PFSQR2	9289.34	7685.96	7597.28
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	AGSDTELAAPK	AGSDTELAAPK	2	AGSDTELAAPK2	21372.2	16553.9	10929.1
A0A0G2K652	A0A0G2K652	A0A0G2K652_RAT	Cul9	Cullin 9	1	AGSELFGPR	AGSELFGPR	2	AGSELFGPR2	6361.84	5813.26	5047.75
F7EUW3	F7EUW3	F7EUW3_RAT	C2cd2l	C2CD2-like	1	AGSEVEWAEDLALDLGPQSR	AGSEVEWAEDLALDLGPQSR	3	AGSEVEWAEDLALDLGPQSR3	6247.76	8490.96	7292.22
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	AGSFVGK	AGSFVGK	1	AGSFVGK1	29159.2	20387	14077.6
D4A1A5	D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	AGSGMVVDAASSNGPFQPVALLHIR	AGSGMVVDAASSNGPFQPVALLHIR	3	AGSGMVVDAASSNGPFQPVALLHIR3	19958.8	19709.7	18178.2
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	AGSGTPPVFSAAR	AGSGTPPVFSAAR	2	AGSGTPPVFSAAR2	42258.3	53149	52448.3
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	AGSISTLDSLDFAR	AGSISTLDSLDFAR	2	AGSISTLDSLDFAR2	11324.9	9429.73	9248.62
Q4KLF8	Q4KLF8	ARPC5_RAT	Arpc5	Actin-related protein 2/3 complex subunit 5	1	AGSIVLK	AGSIVLK	1	AGSIVLK1	9104.38	13434.4	6451.22
D3ZHZ3	D4A0F3;D3ZHZ3	D3ZHZ3_RAT	Osbpl3	Oxysterol-binding protein	0	AGSKPFNPVLGETYECIR	AGSKPFNPVLGETYEC(UniMod:4)IR	3	AGSKPFNPVLGETYEC(UniMod:4)IR3	17309.8	16172.5	18747.8
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	AGSLKDPEIAELFFK	AGSLKDPEIAELFFK	3	AGSLKDPEIAELFFK3	19149	10098	20056
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	AGSLKDPLLDDHGDFIR	AGSLKDPLLDDHGDFIR	3	AGSLKDPLLDDHGDFIR3	15501.3	14977.2	9224.58
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	AGSLKDPLLDDHGDFIR	AGSLKDPLLDDHGDFIR	4	AGSLKDPLLDDHGDFIR4	54107.2	48850.6	49139.8
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	AGSNMLLIGVHGPTTPCEEVSMK	AGSNMLLIGVHGPTTPC(UniMod:4)EEVSMK	3	AGSNMLLIGVHGPTTPC(UniMod:4)EEVSMK3	7133.69		4811.87
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	AGSPGQHESTYFGR	AGSPGQHESTYFGR	2	AGSPGQHESTYFGR2	84930.9	63898.8	79309.7
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	AGSPGQHESTYFGR	AGSPGQHESTYFGR	3	AGSPGQHESTYFGR3	672406	613060	669066
B2RYD7	B2RYD7	B2RYD7_RAT	Stt3b	dolichyl-diphosphooligosaccharide--protein glycotransferase	1	AGSPTLLNCLMYK	AGSPTLLNC(UniMod:4)LMYK	2	AGSPTLLNC(UniMod:4)LMYK2	19064.9	31747.8	23479.5
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	AGSPVVFMVQSIVNRPR	AGSPVVFMVQSIVNRPR	3	AGSPVVFMVQSIVNRPR3	9650.08	15009.7	7335.14
D3ZYT6	D3ZYT6	D3ZYT6_RAT	Treml1	Triggering receptor expressed on myeloid cells-like 1	1	AGSQLEDPSLDPSASAGPHEFR	AGSQLEDPSLDPSASAGPHEFR	3	AGSQLEDPSLDPSASAGPHEFR3	87732.5	78241.5	72598.2
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	AGSSAQEPSSQTPLK	AGSSAQEPSSQTPLK	2	AGSSAQEPSSQTPLK2	28810	30853.9	25950.3
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	AGSSESIAAFIQR	AGSSESIAAFIQR	2	AGSSESIAAFIQR2	132301	144957	138999
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	AGSSESIAAFIQR	AGSSESIAAFIQR	3	AGSSESIAAFIQR3	3535.11	4852.94	7267.96
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	AGSSESVR	AGSSESVR	2	AGSSESVR2			34629.6
Q6P686	Q6P686	OSTF1_RAT	Ostf1	Osteoclast-stimulating factor 1	1	AGSTALYWACHGGHK	AGSTALYWAC(UniMod:4)HGGHK	2	AGSTALYWAC(UniMod:4)HGGHK2	4940.69	5282.48	2641.31
Q6P686	Q6P686	OSTF1_RAT	Ostf1	Osteoclast-stimulating factor 1	1	AGSTALYWACHGGHK	AGSTALYWAC(UniMod:4)HGGHK	3	AGSTALYWAC(UniMod:4)HGGHK3	47317.9	42084.6	34154.8
Q6P686	Q6P686	OSTF1_RAT	Ostf1	Osteoclast-stimulating factor 1	1	AGSTALYWACHGGHK	AGSTALYWAC(UniMod:4)HGGHK	4	AGSTALYWAC(UniMod:4)HGGHK4	103175	100722	74312.4
A1KQY6	A1KQY6	A1KQY6_RAT	St8sia4	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	1	AGSTIFQHSVQGWK	AGSTIFQHSVQGWK	2	AGSTIFQHSVQGWK2	5737.72	1744.54	2285.66
A1KQY6	A1KQY6	A1KQY6_RAT	St8sia4	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	1	AGSTIFQHSVQGWK	AGSTIFQHSVQGWK	3	AGSTIFQHSVQGWK3	27094.9	34413.5	30358.4
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	AGSTTGLTR	AGSTTGLTR	2	AGSTTGLTR2		61441.8	
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	AGSVHKPAAPSEEK	AGSVHKPAAPSEEK	2	AGSVHKPAAPSEEK2			7358.47
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	AGSVHKPAAPSEEK	AGSVHKPAAPSEEK	3	AGSVHKPAAPSEEK3			19366.8
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	AGSVLENGVSDFEPK	AGSVLENGVSDFEPK	2	AGSVLENGVSDFEPK2	13225.7	10440.2	11106.7
D3ZSY8	D3ZSY8	D3ZSY8_RAT	Tbc1d10b	TBC1 domain family, member 10b	1	AGSVLVVAPGPPVTTATSAPVDLVVPGEAR	AGSVLVVAPGPPVTTATSAPVDLVVPGEAR	3	AGSVLVVAPGPPVTTATSAPVDLVVPGEAR3	10485	20776.7	16220.4
A0A096MK24	A0A096MK24	A0A096MK24_RAT	Morc4	Microrchidia 4	1	AGSVPQAFR	AGSVPQAFR	2	AGSVPQAFR2	14846.7	14168	17415.6
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	AGTAFYIDQCAVR	AGTAFYIDQC(UniMod:4)AVR	2	AGTAFYIDQC(UniMod:4)AVR2	7147.35	7590.99	4002.69
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	AGTDTSTVDQK	AGTDTSTVDQK	2	AGTDTSTVDQK2			4757.91
Q497B0	Q497B0	NIT2_RAT	Nit2	Omega-amidase NIT2	1	AGTEETILYSDIDLK	AGTEETILYSDIDLK	2	AGTEETILYSDIDLK2	927.721		
Q497B0	Q497B0	NIT2_RAT	Nit2	Omega-amidase NIT2	1	AGTEETILYSDIDLKK	AGTEETILYSDIDLKK	3	AGTEETILYSDIDLKK3	12090.3	4811.96	8968.77
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	AGTFQAFEQFGQQLLAHGHYASPEIK	AGTFQAFEQFGQQLLAHGHYASPEIK	3	AGTFQAFEQFGQQLLAHGHYASPEIK3	42065.4	43003.6	43240.8
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	AGTFQAFEQFGQQLLAHGHYASPEIK	AGTFQAFEQFGQQLLAHGHYASPEIK	4	AGTFQAFEQFGQQLLAHGHYASPEIK4	183481	193975	242291
O08651	O08651	SERA_RAT	Phgdh	D-3-phosphoglycerate dehydrogenase	1	AGTGVDNVDLEAATR	AGTGVDNVDLEAATR	2	AGTGVDNVDLEAATR2	9143.37	4699.85	
D4A7F6	D4A7F6	D4A7F6_RAT	Colec10	Collectin subfamily member 10	1	AGTICDCGR	AGTIC(UniMod:4)DC(UniMod:4)GR	2	AGTIC(UniMod:4)DC(UniMod:4)GR2	1193.44		
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	AGTLDLSLSLPGK	AGTLDLSLSLPGK	2	AGTLDLSLSLPGK2	71241.5	98933.9	7.63512e+06
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	AGTLDLSLSLPGK	AGTLDLSLSLPGK	3	AGTLDLSLSLPGK3	85503.4	93833.5	106727
A0A0U1RS29	A0A0U1RS29	A0A0U1RS29_RAT	Rgl2	Ral guanine nucleotide dissociation stimulator-like 2	1	AGTLEALVR	AGTLEALVR	2	AGTLEALVR2	15766.6	22999.9	18183.6
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	AGTLGYPR	AGTLGYPR	2	AGTLGYPR2	10386	10852.3	10293
D3ZWS0	D3ZWS0	D3ZWS0_RAT	Scrib	Scribble planar cell polarity protein	1	AGTLQVGDR	AGTLQVGDR	2	AGTLQVGDR2	8549.2	6363.63	7461.4
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	AGTPVCATNGR	AGTPVC(UniMod:4)ATNGR	2	AGTPVC(UniMod:4)ATNGR2	155405	140714	158165
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	AGTQELDDQIQANLPDEK	AGTQELDDQIQANLPDEK	3	AGTQELDDQIQANLPDEK3	62827.1	66203.5	43898.9
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	AGTQIENIDEDFR	AGTQIENIDEDFR	2	AGTQIENIDEDFR2	47212.1	35129.7	35580.4
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	AGTQIENIDEDFRDGLK	AGTQIENIDEDFRDGLK	2	AGTQIENIDEDFRDGLK2	16740.1	16891.2	15463.1
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	AGTQIENIDEDFRDGLK	AGTQIENIDEDFRDGLK	3	AGTQIENIDEDFRDGLK3	649204	672491	679115
Q9Z1P2	Q8R4I6;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	AGTQIENIEEDFR	AGTQIENIEEDFR	2	AGTQIENIEEDFR2	398299	423866	407048
Q9Z1P2	Q8R4I6;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	AGTQIENIEEDFR	AGTQIENIEEDFR	3	AGTQIENIEEDFR3	16666.5	10250.3	16374.5
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	AGTQIENIEEDFRDGLK	AGTQIENIEEDFRDGLK	2	AGTQIENIEEDFRDGLK2	142724	174584	124859
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	AGTQIENIEEDFRDGLK	AGTQIENIEEDFRDGLK	3	AGTQIENIEEDFRDGLK3	4.15884e+06	4.75659e+06	4.84025e+06
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	AGTQLGAR	AGTQLGAR	2	AGTQLGAR2	27677.9	28800.8	
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	AGTQLLAGLR	AGTQLLAGLR	2	AGTQLLAGLR2	202380	189299	218053
A0A8I5YCC9	A0A8I5YCC9	A0A8I5YCC9_RAT	Itga5	Integrin subunit alpha 5	1	AGTSIWGGLR	AGTSIWGGLR	2	AGTSIWGGLR2	7625.61	12138.6	10274.9
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	AGTSPGTPNR	AGTSPGTPNR	2	AGTSPGTPNR2			19229.6
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	AGTTATCGNHIK	AGTTATC(UniMod:4)GNHIK	2	AGTTATC(UniMod:4)GNHIK2			6870.83
A0A0G2K8I5	A0A0G2K8I5	A0A0G2K8I5_RAT	Pcdh19	Protocadherin 19	1	AGTVIANVAK	AGTVIANVAK	2	AGTVIANVAK2	11144.3	6401.36	8248.54
A0A8I5ZTN9	A0A8I5ZTN9	A0A8I5ZTN9_RAT	Ifi27	Interferon, alpha-inducible protein 27	1	AGTVLSSLPASALAVCPIGVK	AGTVLSSLPASALAVC(UniMod:4)PIGVK	3	AGTVLSSLPASALAVC(UniMod:4)PIGVK3		12046.9	22340.8
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	AGTVPVATEVLK	AGTVPVATEVLK	2	AGTVPVATEVLK2	250918	243193	213494
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	AGTVSMYTK	AGTVSMYTK	2	AGTVSMYTK2	66576.2	69109.2	79310.9
D3ZP82	D3ZP82	D3ZP82_RAT	Loxl3	Lysyl oxidase homolog	1	AGTWGTVCDR	AGTWGTVC(UniMod:4)DR	2	AGTWGTVC(UniMod:4)DR2	5452.8	7009.69	1508.23
Q5XIE8	Q5XIE8	ITM2B_RAT	Itm2b	Integral membrane protein 2B	1	AGTYLPQSYLIHEHMVITDR	AGTYLPQSYLIHEHMVITDR	4	AGTYLPQSYLIHEHMVITDR4	21221.7	16199.1	6866.12
Q6P5P3	Q6P5P3	TTC9C_RAT	Ttc9c	Tetratricopeptide repeat protein 9C	1	AGVAFFHLQDYDQAR	AGVAFFHLQDYDQAR	3	AGVAFFHLQDYDQAR3	3995.83	6237.15	
B4F767	B4F767	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	1	AGVALPFEK	AGVALPFEK	2	AGVALPFEK2	18661.6	21338	16450
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AGVAPLQVK	AGVAPLQVK	1	AGVAPLQVK1	84034.7	57363.6	64725
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AGVAPLQVK	AGVAPLQVK	2	AGVAPLQVK2	1.21329e+07	1.21047e+07	1.36548e+07
P81799	P81799	NAGK_RAT	Nagk	N-acetyl-D-glucosamine kinase	1	AGVDPLVPLR	AGVDPLVPLR	2	AGVDPLVPLR2	6948.9	3336.93	2381.84
Q5M929	Q5M929	RN135_RAT	Rnf135	E3 ubiquitin-protein ligase RNF135	1	AGVDSCPWACPICR	AGVDSC(UniMod:4)PWAC(UniMod:4)PIC(UniMod:4)R	2	AGVDSC(UniMod:4)PWAC(UniMod:4)PIC(UniMod:4)R2	3367.24	1806.68	1920.69
O70631	M0R9W7;A0A0G2KB83;O70631	EST2C_RAT	Ces2c	Acylcarnitine hydrolase	0	AGVHTFLGIPFAK	AGVHTFLGIPFAK	3	AGVHTFLGIPFAK3	3723.95	6138.16	2663.69
Q6MGB5	Q6MGB5	DHB8_RAT	Hsd17b8	(3R)-3-hydroxyacyl-CoA dehydrogenase	1	AGVIGLTQTAAR	AGVIGLTQTAAR	2	AGVIGLTQTAAR2	29345.3		22508.2
Q62910	Q62910	SYNJ1_RAT	Synj1	Synaptojanin-1	1	AGVISAPQSQAR	AGVISAPQSQAR	2	AGVISAPQSQAR2	4757.16	6712.19	2234.62
P54313	A0A8I5ZM25;P54311;O35353;A0A8I6A9K0;P54313	GBB2_RAT	Gnb2	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2	0	AGVLAGHDNR	AGVLAGHDNR	2	AGVLAGHDNR2	626815	552736	582010
Q9JLT0	Q9JLT0	MYH10_RAT	Myh10	Myosin-10	1	AGVLAHLEEER	AGVLAHLEEER	2	AGVLAHLEEER2	1.22797e+06	1.29032e+06	1.20021e+06
Q9JLT0	Q9JLT0	MYH10_RAT	Myh10	Myosin-10	1	AGVLAHLEEER	AGVLAHLEEER	3	AGVLAHLEEER3	178435	218262	146006
Q9JLT0	Q9JLT0	MYH10_RAT	Myh10	Myosin-10	1	AGVLAHLEEERDLK	AGVLAHLEEERDLK	2	AGVLAHLEEERDLK2	16524.6	24985.2	25361
Q9JLT0	Q9JLT0	MYH10_RAT	Myh10	Myosin-10	1	AGVLAHLEEERDLK	AGVLAHLEEERDLK	3	AGVLAHLEEERDLK3	3.62812e+06	4.57013e+06	4.86823e+06
Q9JLT0	Q9JLT0	MYH10_RAT	Myh10	Myosin-10	1	AGVLAHLEEERDLK	AGVLAHLEEERDLK	4	AGVLAHLEEERDLK4	1.42459e+06	1.98066e+06	1.85348e+06
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	AGVLEMGLK	AGVLEMGLK	1	AGVLEMGLK1	4572.87	1671.34	4411.94
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	AGVLEMGLK	AGVLEMGLK	2	AGVLEMGLK2	309694	261066	243507
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	AGVLEMGLKR	AGVLEMGLKR	2	AGVLEMGLKR2	9232.64	14239.7	10158.5
Q05754	Q05754	DOPO_RAT	Dbh	Dopamine beta-hydroxylase	1	AGVLFGMSDR	AGVLFGMSDR	2	AGVLFGMSDR2	9030.5	5600.19	4161.38
D3ZQK4	D3ZQK4	D3ZQK4_RAT	Txndc16	Thioredoxin domain containing 16	1	AGVLLLMR	AGVLLLMR	2	AGVLLLMR2	7174.13	3779.9	7118.26
B2RYL4	B2RYL4	B2RYL4_RAT	Armc6	Armadillo repeat containing 6	1	AGVLPLLTAAITQHGQHADVVR	AGVLPLLTAAITQHGQHADVVR	4	AGVLPLLTAAITQHGQHADVVR4	20164.3	16975.3	27241.9
F7EMB2	F7EMB2	F7EMB2_RAT	Rtraf	RNA transcription, translation and transport factor protein	1	AGVMALANLLQIQR	AGVMALANLLQIQR	2	AGVMALANLLQIQR2	6220.22	10928.4	6366.37
G3V7W1	G3V7W1	PDCD6_RAT	Pdcd6	Programmed cell death protein 6	1	AGVNFSEFTGVWK	AGVNFSEFTGVWK	2	AGVNFSEFTGVWK2	38620.7	45637.7	27841.8
Q3B7D0	Q3B7D0	HEM6_RAT	Cpox	Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial	1	AGVNISVVHGNLSEEAANQMR	AGVNISVVHGNLSEEAANQMR	3	AGVNISVVHGNLSEEAANQMR3	11130.5	4915.5	16569.2
P62425	P62425;F1M4C7;A0A8I6AUG1;D3ZU22;D3ZJH5;A0A8I6AMN7;D3ZPL5;A0A8I6B5R5;D3ZNA3;D4A6B9	RL7A_RAT	Rpl7a	Large ribosomal subunit protein eL8	0	AGVNTVTTLVENK	AGVNTVTTLVENK	2	AGVNTVTTLVENK2	14930	11943.2	15694.5
P62425	P62425;F1M4C7;A0A8I6AUG1;D3ZU22;D3ZJH5;A0A8I6AMN7;D3ZPL5;A0A8I6B5R5;D3ZNA3;D4A6B9	RL7A_RAT	Rpl7a	Large ribosomal subunit protein eL8	0	AGVNTVTTLVENKK	AGVNTVTTLVENKK	3	AGVNTVTTLVENKK3	16617.5	10005.7	17508.5
Q63186	Q63186	EI2BD_RAT	Eif2b4	Translation initiation factor eIF-2B subunit delta	1	AGVPTSYLLIPAASYVLPEVSK	AGVPTSYLLIPAASYVLPEVSK	3	AGVPTSYLLIPAASYVLPEVSK3	5251.34	5231.47	7392.21
F7F172	F7F172	F7F172_RAT	Mettl15	Methyltransferase like 15	1	AGVQPGTVDGVLLDLGCSSMQLDAPER	AGVQPGTVDGVLLDLGC(UniMod:4)SSMQLDAPER	3	AGVQPGTVDGVLLDLGC(UniMod:4)SSMQLDAPER3	1568.17		
D3ZJF8	D3ZJF8;F7EZQ4	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	0	AGVQVWLGK	AGVQVWLGK	1	AGVQVWLGK1	31716.7	32931.4	31959.1
D3ZJF8	D3ZJF8;F7EZQ4	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	0	AGVQVWLGK	AGVQVWLGK	2	AGVQVWLGK2	20041.9	19445.3	1.00673e+06
Q6AYA0	Q6AYA0	RIPL2_RAT	Rilpl2	RILP-like protein 2	1	AGVSGSEVNLGPDK	AGVSGSEVNLGPDK	2	AGVSGSEVNLGPDK2	5517.18	7424.9	7381.44
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	AGVSTPSSGAASPR	AGVSTPSSGAASPR	2	AGVSTPSSGAASPR2	449873	446905	341844
A0A0G2K0W3	A0A0G2K0W3	A0A0G2K0W3_RAT	Ttyh3	Protein tweety homolog	1	AGVSYAAPWWVSLLHR	AGVSYAAPWWVSLLHR	3	AGVSYAAPWWVSLLHR3	5268.9	4529.98	7768.61
Q924S5	A0A8I6B3S7;Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	0	AGVTCIILPAENR	AGVTC(UniMod:4)IILPAENR	2	AGVTC(UniMod:4)IILPAENR2	41775.5	31385.4	31119.7
Q62713;Q9Z1F1	Q62713;Q9Z1F1	DEF3A_RAT;DEF3B_RAT		Neutrophil antibiotic peptide NP-3A	0	AGVTCSCR	AGVTC(UniMod:4)SC(UniMod:4)R	2	AGVTC(UniMod:4)SC(UniMod:4)R2			11577.4
Q62715;Q62716	Q62716;Q62715	DEF1_RAT;DEF2_RAT	Defa	Neutrophil antibiotic peptide NP-2	0	AGVTCYCR	AGVTC(UniMod:4)YC(UniMod:4)R	2	AGVTC(UniMod:4)YC(UniMod:4)R2	5615.96		6078.49
D3ZE72	D3ZE72	D3ZE72_RAT	Metap1	Methionine aminopeptidase	1	AGVTTEEIDHAVHLACIAR	AGVTTEEIDHAVHLAC(UniMod:4)IAR	3	AGVTTEEIDHAVHLAC(UniMod:4)IAR3	3073.21	3361.93	11833.8
D3ZE72	D3ZE72	D3ZE72_RAT	Metap1	Methionine aminopeptidase	1	AGVTTEEIDHAVHLACIAR	AGVTTEEIDHAVHLAC(UniMod:4)IAR	4	AGVTTEEIDHAVHLAC(UniMod:4)IAR4	7401.87	10609.7	9834.97
O08774	O08774	RGS12_RAT	Rgs12	Regulator of G-protein signaling 12	1	AGVVAEYPAEK	AGVVAEYPAEK	2	AGVVAEYPAEK2	14884.6	11385.5	12835.8
P17105	P17105	IP3KA_RAT	Itpka	Inositol-trisphosphate 3-kinase A	1	AGVWLIDFGK	AGVWLIDFGK	2	AGVWLIDFGK2	6955.6	10572.4	3565.1
Q9WVK3	Q9WVK3	PECR_RAT	Pecr	Peroxisomal trans-2-enoyl-CoA reductase	1	AGVYNLTK	AGVYNLTK	2	AGVYNLTK2	34425.8	23199.4	19764.6
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	AGVYPEK	AGVYPEK	1	AGVYPEK1	6803.27	5350.33	8092.34
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	AGVYPEK	AGVYPEK	2	AGVYPEK2	88026.1	93271.8	94294.8
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	AGVYSACQEAK	AGVYSAC(UniMod:4)QEAK	2	AGVYSAC(UniMod:4)QEAK2	37176.5	39490.6	25064.1
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	AGVYSACQEAKEDIK	AGVYSAC(UniMod:4)QEAKEDIK	3	AGVYSAC(UniMod:4)QEAKEDIK3		12147.1	
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	AGWADIR	AGWADIR	2	AGWADIR2	91502.3	104314	100722
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	AGWLDKNPPQGSYIYQK	AGWLDKNPPQGSYIYQK	3	AGWLDKNPPQGSYIYQK3	33824.4	42064	58674.7
A0A8I6ASK6	A0A8I6ASK6	A0A8I6ASK6_RAT	Fcrl1	Fc receptor-like 1	1	AGWNLQASK	AGWNLQASK	1	AGWNLQASK1	18824.1	11156.5	13537.6
A0A8I6ASK6	A0A8I6ASK6	A0A8I6ASK6_RAT	Fcrl1	Fc receptor-like 1	1	AGWNLQASK	AGWNLQASK	2	AGWNLQASK2	1.44532e+06	1.31265e+06	1.40026e+06
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	AGWTIVTPPTPVIPDDHPLWMSSK	AGWTIVTPPTPVIPDDHPLWMSSK	3	AGWTIVTPPTPVIPDDHPLWMSSK3	85726	108495	94384.6
D3ZHQ1	D3ZHQ1	D3ZHQ1_RAT	Dpp8	Dipeptidylpeptidase 8	1	AGWTPEGK	AGWTPEGK	2	AGWTPEGK2	5490.35	7289.35	
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	AGWYDEEAR	AGWYDEEAR	2	AGWYDEEAR2	12757.6	9257.69	14204.5
D4A1Y5	D4A1Y5	D4A1Y5_RAT	Mthfd2	methenyltetrahydrofolate cyclohydrolase	1	AGYITPVPGGVGPMTVAMLMK	AGYITPVPGGVGPMTVAMLMK	3	AGYITPVPGGVGPMTVAMLMK3	7410.22	12157.4	13240.4
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	AGYLSTNTQQFVAAFEDGR	AGYLSTNTQQFVAAFEDGR	3	AGYLSTNTQQFVAAFEDGR3	17919.1	16822.7	19212.3
Q9ES02	Q9ES02	MEPE_RAT	Mepe	Matrix extracellular phosphoglycoprotein	1	AGYNEIPK	AGYNEIPK	2	AGYNEIPK2	4653.22	11095.2	
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	AGYPQYVSEILEK	AGYPQYVSEILEK	2	AGYPQYVSEILEK2	27238.6	7953.61	14239.2
D3ZCT7	D3ZCT7	D3ZCT7_RAT	Sec23b	Protein transport protein SEC23	1	AGYQDMPEYENFK	AGYQDMPEYENFK	2	AGYQDMPEYENFK2	2716.18	7115.27	5359.96
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	AGYQRELNYK	AGYQRELNYK	2	AGYQRELNYK2	1444.59		1145.71
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	AGYQRELNYK	AGYQRELNYK	3	AGYQRELNYK3	80209.5	69321.9	116598
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	AGYQSTLTR	AGYQSTLTR	2	AGYQSTLTR2	44886.7	48379.7	47017.3
Q3B7U1	Q3B7U1	Q3B7U1_RAT	Maged2	MAGE family member D2	1	AGYSLEK	AGYSLEK	2	AGYSLEK2	38231.3	55068.1	49629
P04764	M0R5J4;P04764	ENOA_RAT	Eno1	Alpha-enolase	0	AGYTDQVVIGMDVAASEFYR	AGYTDQVVIGMDVAASEFYR	3	AGYTDQVVIGMDVAASEFYR3	22893.7	24277.4	20496.2
A0A8J8YNR6	A0A8J8YNR6	A0A8J8YNR6_RAT	Fxr2	FMR1 autosomal homolog 2	1	AGYTTDESSSSSLHTTR	AGYTTDESSSSSLHTTR	3	AGYTTDESSSSSLHTTR3	6563.97	4459.14	3102.62
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	AGYVCGKDVDIDSYPDEELPCSAR	AGYVC(UniMod:4)GKDVDIDSYPDEELPC(UniMod:4)SAR	4	AGYVC(UniMod:4)GKDVDIDSYPDEELPC(UniMod:4)SAR4	32080.3	30704.1	53340.1
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	AGYYFDGISR	AGYYFDGISR	2	AGYYFDGISR2	2.13608e+06	1.5394e+06	1.12077e+06
A0A8I6AD71	A0A8I6AD71	A0A8I6AD71_RAT	Rsbn1l	Round spermatid basic protein 1-like	1	AHADHIGQGFER	AHADHIGQGFER	3	AHADHIGQGFER3	9092.42		
Q4QR85	Q4QR85	MEP50_RAT	Wdr77	Methylosome protein WDR77	1	AHAGQVTCVAASPHR	AHAGQVTC(UniMod:4)VAASPHR	2	AHAGQVTC(UniMod:4)VAASPHR2	1078.85		1840.07
Q4QR85	Q4QR85	MEP50_RAT	Wdr77	Methylosome protein WDR77	1	AHAGQVTCVAASPHR	AHAGQVTC(UniMod:4)VAASPHR	3	AHAGQVTC(UniMod:4)VAASPHR3	17779.1	12454.9	16627
Q4QR85	Q4QR85	MEP50_RAT	Wdr77	Methylosome protein WDR77	1	AHAGQVTCVAASPHR	AHAGQVTC(UniMod:4)VAASPHR	4	AHAGQVTC(UniMod:4)VAASPHR4	59192.5	31575.7	44436.6
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	AHAPPPVPVPR	AHAPPPVPVPR	2	AHAPPPVPVPR2	11765.9	13788.7	7929.27
P82471	P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	1	AHAQLVR	AHAQLVR	2	AHAQLVR2	349029	314731	334469
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	AHASPADLCHYHSQEPEGLVCLLK	AHASPADLC(UniMod:4)HYHSQEPEGLVC(UniMod:4)LLK	4	AHASPADLC(UniMod:4)HYHSQEPEGLVC(UniMod:4)LLK4	35191.3	38461.2	39422.3
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AHATGAGPAGR	AHATGAGPAGR	2	AHATGAGPAGR2			848611
Q9JJM9	Q9JJM9	SEPT5_RAT	Septin5	Septin-5	1	AHCIQQMTSK	AHC(UniMod:4)IQQMTSK	2	AHC(UniMod:4)IQQMTSK2	8475.07	6360.92	5036.67
Q9JJM9	Q9JJM9	SEPT5_RAT	Septin5	Septin-5	1	AHCIQQMTSK	AHC(UniMod:4)IQQMTSK	3	AHC(UniMod:4)IQQMTSK3	22592.8	19546.6	18672
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	AHCLHQTFHALHK	AHC(UniMod:4)LHQTFHALHK	4	AHC(UniMod:4)LHQTFHALHK4	14635.7	9203.96	5080.15
D3ZKG1	D3ZKG1	D3ZKG1_RAT	Mmut	Methylmalonyl-CoA mutase, mitochondrial	1	AHCQTSGWSLTEQDPYNNIVR	AHC(UniMod:4)QTSGWSLTEQDPYNNIVR	3	AHC(UniMod:4)QTSGWSLTEQDPYNNIVR3	4622.33	3101.32	5370.76
F1MA46	F1MA46	F1MA46_RAT	Pcdh12	Protocadherin 12	1	AHDADLGSNGK	AHDADLGSNGK	2	AHDADLGSNGK2			1633.39
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	AHDGGIYAISWSPDSTHLLSASGDK	AHDGGIYAISWSPDSTHLLSASGDK	3	AHDGGIYAISWSPDSTHLLSASGDK3	40400.9	32026.4	30643
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	AHDGGIYAISWSPDSTHLLSASGDK	AHDGGIYAISWSPDSTHLLSASGDK	4	AHDGGIYAISWSPDSTHLLSASGDK4	490533	454901	491477
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	AHDGSVFTLCQMR	AHDGSVFTLC(UniMod:4)QMR	2	AHDGSVFTLC(UniMod:4)QMR2	9287.57	6413.71	7256.54
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	AHDGSVFTLCQMR	AHDGSVFTLC(UniMod:4)QMR	3	AHDGSVFTLC(UniMod:4)QMR3	63855.5	80251.4	70307.5
Q499T2	Q499T2	GILT_RAT	Ifi30	Gamma-interferon-inducible lysosomal thiol reductase	1	AHDLCLFGPR	AHDLC(UniMod:4)LFGPR	2	AHDLC(UniMod:4)LFGPR2	24290.6	20878.4	20655.9
Q499T2	Q499T2	GILT_RAT	Ifi30	Gamma-interferon-inducible lysosomal thiol reductase	1	AHDLCLFGPR	AHDLC(UniMod:4)LFGPR	3	AHDLC(UniMod:4)LFGPR3	243085	168024	152748
A0A8I5ZZN7	A0A8I5ZZN7	A0A8I5ZZN7_RAT	Tusc1	Tumor suppressor candidate 1	1	AHDPDVPGPWL	AHDPDVPGPWL	2	AHDPDVPGPWL2	5402.11	3040.75	4914.96
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	AHDVNVEDLNK	AHDVNVEDLNK	2	AHDVNVEDLNK2	3931.98	1602.67	2586.28
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	AHDVNVEDLNK	AHDVNVEDLNK	3	AHDVNVEDLNK3	14383.4	13033.9	21763.4
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	AHDVNVEDLNKK	AHDVNVEDLNKK	3	AHDVNVEDLNKK3	28822	12270.6	20186.6
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	AHEAELER	AHEAELER	2	AHEAELER2	14200.4		15678.1
Q9WTV0	Q9WTV0	PREB_RAT	Preb	Prolactin regulatory element-binding protein	1	AHEGEIGDLALGPDGK	AHEGEIGDLALGPDGK	2	AHEGEIGDLALGPDGK2	1622.39	3007.55	
Q9WTV0	Q9WTV0	PREB_RAT	Preb	Prolactin regulatory element-binding protein	1	AHEGEIGDLALGPDGK	AHEGEIGDLALGPDGK	3	AHEGEIGDLALGPDGK3	30116.8	26897.8	28780.7
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	AHEILPDLVCCSAK	AHEILPDLVC(UniMod:4)C(UniMod:4)SAK	2	AHEILPDLVC(UniMod:4)C(UniMod:4)SAK2	107885	93234	86433.9
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	AHEILPDLVCCSAK	AHEILPDLVC(UniMod:4)C(UniMod:4)SAK	3	AHEILPDLVC(UniMod:4)C(UniMod:4)SAK3	51704.1	57313.7	48038.9
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	AHELDAQAIAR	AHELDAQAIAR	3	AHELDAQAIAR3	6016.76	4054.67	12878.7
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AHEPTYFTVDCTEAGQGDVSIGIK	AHEPTYFTVDC(UniMod:4)TEAGQGDVSIGIK	3	AHEPTYFTVDC(UniMod:4)TEAGQGDVSIGIK3	907342	819786	759001
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AHEPTYFTVDCTEAGQGDVSIGIK	AHEPTYFTVDC(UniMod:4)TEAGQGDVSIGIK	4	AHEPTYFTVDC(UniMod:4)TEAGQGDVSIGIK4	9240.51	12428.5	9193.71
A0A0G2QC02	A0A0G2QC02	A0A0G2QC02_RAT	Skic2	Ski2 like RNA helicase	1	AHEQALADLTK	AHEQALADLTK	3	AHEQALADLTK3	6704.96	11969.8	12676.4
D3ZZU4	D3ZZU4	D3ZZU4_RAT	Tmem160	Transmembrane protein 160	1	AHETAFLSWFR	AHETAFLSWFR	3	AHETAFLSWFR3	5926.18	6079.22	7453.53
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	AHETNILEIK	AHETNILEIK	2	AHETNILEIK2	4432.03	4865.14	6816.72
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	AHETNILEIK	AHETNILEIK	3	AHETNILEIK3	32840.2	34811.8	27575.9
B4F7E7	B4F7E7	PALS1_RAT	Pals1	Protein PALS1	1	AHFDYDPSDDPYVPCR	AHFDYDPSDDPYVPC(UniMod:4)R	3	AHFDYDPSDDPYVPC(UniMod:4)R3	4325.36	7636.58	3645.57
D4A4T0	D4A4T0	D4A4T0_RAT	Stub1	STIP1 homology and U-box containing protein 1	1	AHFFLGQCQLEMESYDEAIANLQR	AHFFLGQC(UniMod:4)QLEMESYDEAIANLQR	3	AHFFLGQC(UniMod:4)QLEMESYDEAIANLQR3	1578.01		10146.6
F1M798	D3Z8U5;F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	0	AHFFSDKDECSK	AHFFSDKDEC(UniMod:4)SK	2	AHFFSDKDEC(UniMod:4)SK2	1176.04	2366.19	
F1M798	D3Z8U5;F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	0	AHFFSDKDECSK	AHFFSDKDEC(UniMod:4)SK	3	AHFFSDKDEC(UniMod:4)SK3	19898.8	16552.2	10526
Q32KK2	Q32KK2	Q32KK2_RAT	Arsa	Arylsulfatase A	1	AHFFTQGSAHSDTTPDPACHAANR	AHFFTQGSAHSDTTPDPAC(UniMod:4)HAANR	4	AHFFTQGSAHSDTTPDPAC(UniMod:4)HAANR4	4718.86	2291.22	3372.54
Q32Q06	Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	1	AHFGLPSVEAEDK	AHFGLPSVEAEDK	3	AHFGLPSVEAEDK3	22317	13526	11548.4
Q32Q06	Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	1	AHFGLPSVEAEDKEGKPPISVK	AHFGLPSVEAEDKEGKPPISVK	4	AHFGLPSVEAEDKEGKPPISVK4	40278.8	41921.5	24607.9
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	AHFLQGAFSEEELAR	AHFLQGAFSEEELAR	3	AHFLQGAFSEEELAR3	5503.38	4836.66	3602.88
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	AHFNLDESGVLSLDR	AHFNLDESGVLSLDR	2	AHFNLDESGVLSLDR2	9313.03	7302.79	3655.13
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	AHFNLDESGVLSLDR	AHFNLDESGVLSLDR	3	AHFNLDESGVLSLDR3	50844	64898.5	35651.6
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	AHFQNFPNGVTDFIK	AHFQNFPNGVTDFIK	3	AHFQNFPNGVTDFIK3	79690.4	71240.5	62633.3
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	AHFSAMVANLIQCVPVHHR	AHFSAMVANLIQC(UniMod:4)VPVHHR	4	AHFSAMVANLIQC(UniMod:4)VPVHHR4	103538	168728	80514
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	AHFSPANIVRDPPAPGPASR	AHFSPANIVRDPPAPGPASR	4	AHFSPANIVRDPPAPGPASR4	38287.2	44203.6	36550.9
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	AHFSVMGDILSSAIK	AHFSVMGDILSSAIK	2	AHFSVMGDILSSAIK2	1.64717e+06	1.10137e+06	853203
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	AHFSVMGDILSSAIK	AHFSVMGDILSSAIK	3	AHFSVMGDILSSAIK3	691283	545339	576795
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	AHFSVMGDILSSAIK	AHFSVMGDILSSAIK	4	AHFSVMGDILSSAIK4	178361	165442	123519
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	AHGELHEQFK	AHGELHEQFK	3	AHGELHEQFK3	20027.8	25990.3	32052.7
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	AHGELHEQFKR	AHGELHEQFKR	3	AHGELHEQFKR3	1905.38		3239.52
D4A5G8	D4A5G8	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	1	AHGFTFTR	AHGFTFTR	2	AHGFTFTR2	43095.1	32494.7	34905.6
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	AHGGYSVFAGVGER	AHGGYSVFAGVGER	2	AHGGYSVFAGVGER2	105815	112592	126146
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	AHGGYSVFAGVGER	AHGGYSVFAGVGER	3	AHGGYSVFAGVGER3	1.08638e+06	1.16583e+06	1.25449e+06
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	AHGHCLHEIFLLR	AHGHC(UniMod:4)LHEIFLLR	3	AHGHC(UniMod:4)LHEIFLLR3	5609.17	5443.6	6244.44
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	AHGHCLHEIFLLR	AHGHC(UniMod:4)LHEIFLLR	4	AHGHC(UniMod:4)LHEIFLLR4	40368.1	57784.5	34171.3
P04646	D4A771;F1M0T2;A0A8L2QNQ0;P04646;A0A096P6M4;D3ZZN4	RL35A_RAT	Rpl35a	Large ribosomal subunit protein eL33	0	AHGNSGMVR	AHGNSGMVR	2	AHGNSGMVR2			21565.4
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	AHGNVQDR	AHGNVQDR	2	AHGNVQDR2			4681.88
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	AHGPGLEGGLVGKPAEFTIDTK	AHGPGLEGGLVGKPAEFTIDTK	4	AHGPGLEGGLVGKPAEFTIDTK4	17689.1		4430.34
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	AHGSFSHVR	AHGSFSHVR	2	AHGSFSHVR2			5604.04
A0A8I5YCC9	A0A8I5YCC9	A0A8I5YCC9_RAT	Itga5	Integrin subunit alpha 5	1	AHGSSILACAPLYSWR	AHGSSILAC(UniMod:4)APLYSWR	3	AHGSSILAC(UniMod:4)APLYSWR3	9410.22		
A0A8I6ANH8	A0A8I6ANH8	A0A8I6ANH8_RAT	Dock6	Dedicator of cytokinesis 6	1	AHGTHPAISTLAR	AHGTHPAISTLAR	3	AHGTHPAISTLAR3	7085.63	3537.33	3231.36
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	AHHILFLK	AHHILFLK	2	AHHILFLK2		6541.56	4454.48
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	AHHYTIER	AHHYTIER	2	AHHYTIER2	14219.3		8518.89
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	AHIANPSGASTECFVK	AHIANPSGASTEC(UniMod:4)FVK	3	AHIANPSGASTEC(UniMod:4)FVK3			6395.12
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	AHIAQLCEK	AHIAQLC(UniMod:4)EK	2	AHIAQLC(UniMod:4)EK2	751814	735446	758938
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	AHICSHEEDAGVVCVGQR	AHIC(UniMod:4)SHEEDAGVVC(UniMod:4)VGQR	3	AHIC(UniMod:4)SHEEDAGVVC(UniMod:4)VGQR3	6168.05	6560.9	
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	AHICSHEEDAGVVCVGQR	AHIC(UniMod:4)SHEEDAGVVC(UniMod:4)VGQR	4	AHIC(UniMod:4)SHEEDAGVVC(UniMod:4)VGQR4	15468.4	13493.5	8235.31
D3ZUC2	D3ZUC2	D3ZUC2_RAT	Mov10	RNA helicase	1	AHILACTPSNSGADLLCQR	AHILAC(UniMod:4)TPSNSGADLLC(UniMod:4)QR	3	AHILAC(UniMod:4)TPSNSGADLLC(UniMod:4)QR3	2751.09	4549.35	
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	AHILSAEFGK	AHILSAEFGK	2	AHILSAEFGK2	33270.2	30770.7	28975.2
D4A2N2	D4A2N2	D4A2N2_RAT	Inpp5b	phosphoinositide 5-phosphatase	1	AHILSMQK	AHILSMQK	2	AHILSMQK2	3621.54	9138.18	5806.31
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	AHIQELLQCSER	AHIQELLQC(UniMod:4)SER	2	AHIQELLQC(UniMod:4)SER2	17625.5	12329.5	18889.9
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	AHIQELLQCSER	AHIQELLQC(UniMod:4)SER	3	AHIQELLQC(UniMod:4)SER3	220708	240523	279297
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	AHIQFKPTLSQQR	AHIQFKPTLSQQR	2	AHIQFKPTLSQQR2	128856	108802	78123.4
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	AHIQFKPTLSQQR	AHIQFKPTLSQQR	3	AHIQFKPTLSQQR3	1.45336e+06	1.34781e+06	1.28543e+06
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	AHIQFKPTLSQQR	AHIQFKPTLSQQR	4	AHIQFKPTLSQQR4	1.23146e+06	1.30867e+06	1.36784e+06
D4AEP0	D4AEP0	D4AEP0_RAT	Adss	Adenylosuccinate synthetase isozyme 2	1	AHIVFDFHQAADGIQEQQR	AHIVFDFHQAADGIQEQQR	3	AHIVFDFHQAADGIQEQQR3	3825.03	3499.1	4611.52
D4AEP0	D4AEP0	D4AEP0_RAT	Adss	Adenylosuccinate synthetase isozyme 2	1	AHIVFDFHQAADGIQEQQR	AHIVFDFHQAADGIQEQQR	4	AHIVFDFHQAADGIQEQQR4	15758.1	9964.89	6559.2
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	AHLALIDYLTQK	AHLALIDYLTQK	3	AHLALIDYLTQK3	12338.9	17140.7	17641.2
F1LUU1	F1LUU1	F1LUU1_RAT	Itga11	Integrin subunit alpha 11	1	AHLDEGADQFTNR	AHLDEGADQFTNR	2	AHLDEGADQFTNR2	3411.6	3247.48	
F1LUU1	F1LUU1	F1LUU1_RAT	Itga11	Integrin subunit alpha 11	1	AHLDEGADQFTNR	AHLDEGADQFTNR	3	AHLDEGADQFTNR3	10974.4	12307.4	11562.8
A0A8I5ZS17	A0A8I5ZS17	A0A8I5ZS17_RAT	Snx25	Sorting nexin 25	1	AHLDQLK	AHLDQLK	2	AHLDQLK2	4919.27		5905.06
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	AHLEASAEK	AHLEASAEK	2	AHLEASAEK2			36549.3
P62268	A0A8I6GC09;A0A8I5ZVD1;F1LTW8;D4A9Q3;A0A8I5Y0L2;P62268	RS23_RAT	Rps23	Small ribosomal subunit protein uS12	0	AHLGTALK	AHLGTALK	2	AHLGTALK2	28550.2	20299.3	20004.9
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	AHLHPDHLVEVR	AHLHPDHLVEVR	3	AHLHPDHLVEVR3			3382.48
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	AHLIELQR	AHLIELQR	2	AHLIELQR2	24259.3	29386.7	18281.5
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	AHLIPIIVLLLQK	AHLIPIIVLLLQK	3	AHLIPIIVLLLQK3	7610.45	12335.6	12911.9
Q68FS3	Q68FS3	FBX7_RAT	Fbxo7	F-box only protein 7	1	AHLIQDLLPTLGFSSDTR	AHLIQDLLPTLGFSSDTR	3	AHLIQDLLPTLGFSSDTR3	12426.5	10212.2	10908
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	AHLLADMAHISGLVAAK	AHLLADMAHISGLVAAK	2	AHLLADMAHISGLVAAK2	845.474		2067.84
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	AHLLADMAHISGLVAAK	AHLLADMAHISGLVAAK	3	AHLLADMAHISGLVAAK3	35489.6	26631.1	35397.5
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	AHLLADMAHISGLVAAK	AHLLADMAHISGLVAAK	4	AHLLADMAHISGLVAAK4	23222.6	27991.9	23955.8
Q9JI51	Q9JI51	VTI1A_RAT	Vti1a	Vesicle transport through interaction with t-SNAREs homolog 1A	1	AHLLDNTER	AHLLDNTER	2	AHLLDNTER2	26495	18840.6	33110.6
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	AHLLLQAHLSR	AHLLLQAHLSR	3	AHLLLQAHLSR3	5655.1	6355.2	4934.36
P21531	P21531	RL3_RAT	Rpl3	Large ribosomal subunit protein uL3	1	AHLMEIQVNGGTVAEK	AHLMEIQVNGGTVAEK	3	AHLMEIQVNGGTVAEK3	4302.78	4833.37	
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	AHLPLDINFR	AHLPLDINFR	3	AHLPLDINFR3	55200.3	45791.9	51656.2
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	AHLQGPTGASVAGPQTSEAFVITVR	AHLQGPTGASVAGPQTSEAFVITVR	3	AHLQGPTGASVAGPQTSEAFVITVR3	41210.3	45212.5	24516.6
F1LVL2	F1LVL2	F1LVL2_RAT	Icoslg	Inducible T-cell co-stimulator ligand	1	AHLSPDLMK	AHLSPDLMK	2	AHLSPDLMK2	224840	190574	158817
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	AHLVAVFNEYQR	AHLVAVFNEYQR	2	AHLVAVFNEYQR2	20315.2	19893.1	19435.9
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	AHLVAVFNEYQR	AHLVAVFNEYQR	3	AHLVAVFNEYQR3	168567	154006	193154
Q32KJ6	Q32KJ6	GALNS_RAT	Galns	N-acetylgalactosamine-6-sulfatase	1	AHLWTWTNSWEEFR	AHLWTWTNSWEEFR	2	AHLWTWTNSWEEFR2	2011.72	5133.45	4891.42
Q32KJ6	Q32KJ6	GALNS_RAT	Galns	N-acetylgalactosamine-6-sulfatase	1	AHLWTWTNSWEEFR	AHLWTWTNSWEEFR	3	AHLWTWTNSWEEFR3	10841.4	10855.7	7150.76
Q5FWS5	Q5FWS5	Q5FWS5_RAT	Loxl1	Lysyl oxidase homolog	1	AHLYSLR	AHLYSLR	2	AHLYSLR2	33029.7	37293.8	35317.1
M0R8J3	M0R8J3	M0R8J3_RAT	Jmy	Junction mediating and regulatory protein, p53 cofactor	1	AHMAVLSIQDLTVK	AHMAVLSIQDLTVK	2	AHMAVLSIQDLTVK2	1851.22	1857.01	
M0R8J3	M0R8J3	M0R8J3_RAT	Jmy	Junction mediating and regulatory protein, p53 cofactor	1	AHMAVLSIQDLTVK	AHMAVLSIQDLTVK	3	AHMAVLSIQDLTVK3	4369.69	6701.94	3409.98
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	AHMGMFTELAILYSK	AHMGMFTELAILYSK	2	AHMGMFTELAILYSK2	10635.8	17259.6	10437.5
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	AHMGMFTELAILYSK	AHMGMFTELAILYSK	3	AHMGMFTELAILYSK3	88208.3	53682.2	60384.4
Q80WE1	Q80WE1	FMR1_RAT	Fmr1	Fragile X messenger ribonucleoprotein 1	1	AHMLIDMHFR	AHMLIDMHFR	3	AHMLIDMHFR3	1629.19	1871.92	
Q8CGS4	Q8CGS4	CHMP3_RAT	Chmp3	Charged multivesicular body protein 3	1	AHMNSVLMGMK	AHMNSVLMGMK	2	AHMNSVLMGMK2	56289.5	77079.4	53476.8
Q8CGS4	Q8CGS4	CHMP3_RAT	Chmp3	Charged multivesicular body protein 3	1	AHMNSVLMGMK	AHMNSVLMGMK	3	AHMNSVLMGMK3	122773	125419	143219
D4AA31	D4AA31	D4AA31_RAT	Prcp	Prolylcarboxypeptidase	1	AHNAFDPSSVLLSR	AHNAFDPSSVLLSR	2	AHNAFDPSSVLLSR2	6089.22	1588.86	6056.33
D4AA31	D4AA31	D4AA31_RAT	Prcp	Prolylcarboxypeptidase	1	AHNAFDPSSVLLSR	AHNAFDPSSVLLSR	3	AHNAFDPSSVLLSR3	52072.9	57996.8	46787
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	AHNAVVTSAIFAPNPSLMLSLDVQSEK	AHNAVVTSAIFAPNPSLMLSLDVQSEK	3	AHNAVVTSAIFAPNPSLMLSLDVQSEK3	54741.9	75473.9	48114.8
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	AHNIFPHITLCQFFMCEDSK	AHNIFPHITLC(UniMod:4)QFFMC(UniMod:4)EDSK	3	AHNIFPHITLC(UniMod:4)QFFMC(UniMod:4)EDSK3		15738.5	8725.12
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	AHNIFPHITLCQFFMCEDSK	AHNIFPHITLC(UniMod:4)QFFMC(UniMod:4)EDSK	4	AHNIFPHITLC(UniMod:4)QFFMC(UniMod:4)EDSK4	104064	113456	130603
Q03070	Q03070	CHIO_RAT	Chn2	Beta-chimaerin	1	AHNTQRPMVVDICIR	AHNTQRPMVVDIC(UniMod:4)IR	4	AHNTQRPMVVDIC(UniMod:4)IR4		3544.98	5222.4
Q63186	Q63186	EI2BD_RAT	Eif2b4	Translation initiation factor eIF-2B subunit delta	1	AHNVPVLVCCETYK	AHNVPVLVC(UniMod:4)C(UniMod:4)ETYK	3	AHNVPVLVC(UniMod:4)C(UniMod:4)ETYK3	22965.8	19930.9	12947.2
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	AHPAYHSFSNK	AHPAYHSFSNK	2	AHPAYHSFSNK2	4543.35	10140.2	8359.39
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	AHPAYHSFSNK	AHPAYHSFSNK	3	AHPAYHSFSNK3	11855	20823.2	24104.4
A0A8I5ZKJ3	A0A8I5ZKJ3	A0A8I5ZKJ3_RAT	Ndufa2	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2	1	AHPDLPILIR	AHPDLPILIR	2	AHPDLPILIR2	45879.8	51885	38699.6
A0A8I5ZKJ3	A0A8I5ZKJ3	A0A8I5ZKJ3_RAT	Ndufa2	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2	1	AHPDLPILIR	AHPDLPILIR	3	AHPDLPILIR3	80760.2	82070.1	79948.1
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	AHPDNDCTYFFGDEVSYTCQNDIMLTATCK	AHPDNDC(UniMod:4)TYFFGDEVSYTC(UniMod:4)QNDIMLTATC(UniMod:4)K	4	AHPDNDC(UniMod:4)TYFFGDEVSYTC(UniMod:4)QNDIMLTATC(UniMod:4)K4	95522.9	131745	86096.6
D3ZE36	D3ZE36	D3ZE36_RAT	B3gnt8	Hexosyltransferase	1	AHPGFLTAWPAER	AHPGFLTAWPAER	3	AHPGFLTAWPAER3	3191.14		4110.48
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	AHPLDSLEK	AHPLDSLEK	2	AHPLDSLEK2	24484		34085.1
P04041	P04041	GPX1_RAT	Gpx1	Glutathione peroxidase 1	1	AHPLFTFLR	AHPLFTFLR	2	AHPLFTFLR2	84016.3	83496.8	83141
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	AHPLLIDIVTYLMALIPNPSVQR	AHPLLIDIVTYLMALIPNPSVQR	3	AHPLLIDIVTYLMALIPNPSVQR3	41755.6	12507.3	7054.47
Q5BK32	Q5BK32	FAF2_RAT	Faf2	FAS-associated factor 2	1	AHPVFYQGTYSQALSDAK	AHPVFYQGTYSQALSDAK	3	AHPVFYQGTYSQALSDAK3	26631.2	26944.9	30967.8
Q5FVG1	Q5FVG1	GP157_RAT	Gpr157	G-protein coupled receptor 157	1	AHQALSEYRPIWEGR	AHQALSEYRPIWEGR	3	AHQALSEYRPIWEGR3	6992.3	13754.8	
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	AHQANQLYPFAISLIESVR	AHQANQLYPFAISLIESVR	3	AHQANQLYPFAISLIESVR3	64902.2	93818	64169.9
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	AHQDIHTQLQDVK	AHQDIHTQLQDVK	2	AHQDIHTQLQDVK2		1649.8	
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	AHQDIHTQLQDVK	AHQDIHTQLQDVK	3	AHQDIHTQLQDVK3	23576.2	18524.7	24342.8
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	AHQDIHTQLQDVK	AHQDIHTQLQDVK	4	AHQDIHTQLQDVK4		5939.74	
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	AHQFSIK	AHQFSIK	2	AHQFSIK2	28045.6	22446.6	34094.1
Q66HA4	Q66HA4	TAXB1_RAT	Tax1bp1	Tax1-binding protein 1 homolog	1	AHQLEEDIVSVTHK	AHQLEEDIVSVTHK	4	AHQLEEDIVSVTHK4			5550.6
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	AHQLSVTSQVQELQNLLR	AHQLSVTSQVQELQNLLR	3	AHQLSVTSQVQELQNLLR3		932.661	6531.68
Q64620	Q64620	PPP6_RAT	Ppp6c	Serine/threonine-protein phosphatase 6 catalytic subunit	1	AHQLVHEGYK	AHQLVHEGYK	2	AHQLVHEGYK2	30114.9	33355.7	17298.1
Q64620	Q64620	PPP6_RAT	Ppp6c	Serine/threonine-protein phosphatase 6 catalytic subunit	1	AHQLVHEGYK	AHQLVHEGYK	3	AHQLVHEGYK3	58517.7	30616.6	58854.5
D4AB03	D4AB03;A0A8I6A052	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	0	AHQLVLPPCDVVIK	AHQLVLPPC(UniMod:4)DVVIK	2	AHQLVLPPC(UniMod:4)DVVIK2	9242.16	12705	11961.7
D4AB03	D4AB03;A0A8I6A052	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	0	AHQLVLPPCDVVIK	AHQLVLPPC(UniMod:4)DVVIK	3	AHQLVLPPC(UniMod:4)DVVIK3	36504.6	35420	20930.1
Q5BJ92	Q5BJ92	PP4C_RAT	Ppp4c	Serine/threonine-protein phosphatase 4 catalytic subunit	1	AHQLVMEGYK	AHQLVMEGYK	2	AHQLVMEGYK2	3307.13	3370.48	
Q5BJ92	Q5BJ92	PP4C_RAT	Ppp4c	Serine/threonine-protein phosphatase 4 catalytic subunit	1	AHQLVMEGYK	AHQLVMEGYK	3	AHQLVMEGYK3	23596.8	24564	35319.3
P62716	A0A0G2JYA4;P63331;P62716	PP2AB_RAT	Ppp2cb	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	0	AHQLVMEGYNWCHDR	AHQLVMEGYNWC(UniMod:4)HDR	2	AHQLVMEGYNWC(UniMod:4)HDR2	3115.43	2058.41	
P62716	A0A0G2JYA4;P63331;P62716	PP2AB_RAT	Ppp2cb	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	0	AHQLVMEGYNWCHDR	AHQLVMEGYNWC(UniMod:4)HDR	3	AHQLVMEGYNWC(UniMod:4)HDR3	35068.9	27245.9	26683.8
P62716	A0A0G2JYA4;P63331;P62716	PP2AB_RAT	Ppp2cb	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	0	AHQLVMEGYNWCHDR	AHQLVMEGYNWC(UniMod:4)HDR	4	AHQLVMEGYNWC(UniMod:4)HDR4	99231.6	131372	91586.5
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	AHQLWLSVEALK	AHQLWLSVEALK	2	AHQLWLSVEALK2	14404.4	10167.1	13560.1
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	AHQLWLSVEALK	AHQLWLSVEALK	3	AHQLWLSVEALK3	86920	72629.3	65545.1
D4ADS4	A0A8I6AQS8;D4ADS4	D4ADS4_RAT	Mgst3	Microsomal glutathione S-transferase 3	0	AHQNTLEVYPPFLFFLTVGGVYHPR	AHQNTLEVYPPFLFFLTVGGVYHPR	3	AHQNTLEVYPPFLFFLTVGGVYHPR3	24230.1	7377.91	
D4ADS4	A0A8I6AQS8;D4ADS4	D4ADS4_RAT	Mgst3	Microsomal glutathione S-transferase 3	0	AHQNTLEVYPPFLFFLTVGGVYHPR	AHQNTLEVYPPFLFFLTVGGVYHPR	4	AHQNTLEVYPPFLFFLTVGGVYHPR4	1990.21	27643.5	42983.6
Q5FWT9	Q5FWT9	SIKE1_RAT	Sike1	Suppressor of IKBKE 1	1	AHQSHSAEIESQIDR	AHQSHSAEIESQIDR	3	AHQSHSAEIESQIDR3	16473.8	20255.6	21250
Q5FWT9	Q5FWT9	SIKE1_RAT	Sike1	Suppressor of IKBKE 1	1	AHQSHSAEIESQIDR	AHQSHSAEIESQIDR	4	AHQSHSAEIESQIDR4	40180.3	43857.9	53789.2
O70377	O70377	SNP23_RAT	Snap23	Synaptosomal-associated protein 23	1	AHQVTDESLESTR	AHQVTDESLESTR	2	AHQVTDESLESTR2	27980.3	19137	21299.1
O70377	O70377	SNP23_RAT	Snap23	Synaptosomal-associated protein 23	1	AHQVTDESLESTR	AHQVTDESLESTR	3	AHQVTDESLESTR3	136122	128425	122838
O70377	O70377	SNP23_RAT	Snap23	Synaptosomal-associated protein 23	1	AHQVTDESLESTRR	AHQVTDESLESTRR	2	AHQVTDESLESTRR2	2700.83		3883.48
O70377	O70377	SNP23_RAT	Snap23	Synaptosomal-associated protein 23	1	AHQVTDESLESTRR	AHQVTDESLESTRR	3	AHQVTDESLESTRR3	329037	277708	328458
O70377	O70377	SNP23_RAT	Snap23	Synaptosomal-associated protein 23	1	AHQVTDESLESTRR	AHQVTDESLESTRR	4	AHQVTDESLESTRR4	334490	317529	456736
P62138	P62138;P63088;P62142	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	0	AHQVVEDGYEFFAK	AHQVVEDGYEFFAK	2	AHQVVEDGYEFFAK2	41536	26315.8	17794.9
P62138	P62138;P63088;P62142	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	0	AHQVVEDGYEFFAK	AHQVVEDGYEFFAK	3	AHQVVEDGYEFFAK3	332429	190218	298851
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	AHSCPSVR	AHSC(UniMod:4)PSVR	1	AHSC(UniMod:4)PSVR1			4912.69
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	AHSCPSVR	AHSC(UniMod:4)PSVR	2	AHSC(UniMod:4)PSVR2			4.91371e+06
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	AHSEEHAASMGPELLR	AHSEEHAASMGPELLR	4	AHSEEHAASMGPELLR4	3455.12	4762.27	4661.95
E9PSX8	E9PSX8	E9PSX8_RAT	Sipa1	Signal-induced proliferation-associated 1	1	AHSHEDTSRPAATPTR	AHSHEDTSRPAATPTR	3	AHSHEDTSRPAATPTR3			1445.76
P62718	P62718;F1M0K6	RL18A_RAT	Rpl18a	Large ribosomal subunit protein eL20	0	AHSIQIMK	AHSIQIMK	2	AHSIQIMK2	9234.28	10418	11655.9
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	AHSPAAAHSNEGPAEAAQLEPK	AHSPAAAHSNEGPAEAAQLEPK	4	AHSPAAAHSNEGPAEAAQLEPK4	5209.51	3165.14	4791.59
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	AHSPALGVHSFSGVQR	AHSPALGVHSFSGVQR	4	AHSPALGVHSFSGVQR4	4831.82		5320.96
Q9JLU4	Q9JLU4	SHAN3_RAT	Shank3	SH3 and multiple ankyrin repeat domains protein 3	1	AHSPQGEGEIPLHR	AHSPQGEGEIPLHR	3	AHSPQGEGEIPLHR3	5915.09	4476.85	3189.99
Q9JLU4	Q9JLU4	SHAN3_RAT	Shank3	SH3 and multiple ankyrin repeat domains protein 3	1	AHSPQGEGEIPLHR	AHSPQGEGEIPLHR	4	AHSPQGEGEIPLHR4	14308.2	9819.3	13260.8
P49445	P49445	PTN7_RAT	Ptpn7	Tyrosine-protein phosphatase non-receptor type 7	1	AHSQEDSDYINANYIR	AHSQEDSDYINANYIR	3	AHSQEDSDYINANYIR3	4801.45	5923.71	
P16617	P16617;M0R6Y8	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	0	AHSSMVGVNLPQK	AHSSMVGVNLPQK	2	AHSSMVGVNLPQK2	25946.5	15580.1	24405.8
P16617	P16617;M0R6Y8	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	0	AHSSMVGVNLPQK	AHSSMVGVNLPQK	3	AHSSMVGVNLPQK3	221059	218004	254969
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	AHSTPEDGALLSDSSALADSTSGAR	AHSTPEDGALLSDSSALADSTSGAR	3	AHSTPEDGALLSDSSALADSTSGAR3	87892.8	102892	89977.6
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	AHSVEECR	AHSVEEC(UniMod:4)R	2	AHSVEEC(UniMod:4)R2			22133.9
D3ZL85	D3ZL85	D3ZL85_RAT	Hccs	Holocytochrome c-type synthase	1	AHSVPAHQDR	AHSVPAHQDR	2	AHSVPAHQDR2			1471.69
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	AHSWQPGIQNPYR	AHSWQPGIQNPYR	2	AHSWQPGIQNPYR2	36308	34464.5	28356.6
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	AHSWQPGIQNPYR	AHSWQPGIQNPYR	3	AHSWQPGIQNPYR3	119342	132777	101780
Q9JIA3	Q9JIA3	IKBB_RAT	Nfkbib	NF-kappa-B inhibitor beta	1	AHTCAYVLLQPR	AHTC(UniMod:4)AYVLLQPR	3	AHTC(UniMod:4)AYVLLQPR3	10169.8	8901.42	7062.91
Q62940	A0A0G2K612;A0A8I5ZQP0;Q62940;F1M3F2;A0A8I6AEH7;D4ADD3	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	0	AHTCFNR	AHTC(UniMod:4)FNR	2	AHTC(UniMod:4)FNR2			279627
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	AHTCFNRLDLPPYESFDELWDK	AHTC(UniMod:4)FNRLDLPPYESFDELWDK	4	AHTC(UniMod:4)FNRLDLPPYESFDELWDK4	20979.2	15609.5	12090.1
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	AHTCVLMK	AHTC(UniMod:4)VLMK	2	AHTC(UniMod:4)VLMK2	2499.73	3658.63	2553.01
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	AHTDFFEAFK	AHTDFFEAFK	2	AHTDFFEAFK2	41827.4	52318.1	39769
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	AHTDFFEAFK	AHTDFFEAFK	3	AHTDFFEAFK3	117075	109352	114603
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	AHTDVGPGPESSPVLVR	AHTDVGPGPESSPVLVR	3	AHTDVGPGPESSPVLVR3	25408.3	18896.1	17817.6
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	AHTEAEALPNTTLELHTQSPEAAGSR	AHTEAEALPNTTLELHTQSPEAAGSR	3	AHTEAEALPNTTLELHTQSPEAAGSR3	21714.4	27468.1	22093.9
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	AHTEAEALPNTTLELHTQSPEAAGSR	AHTEAEALPNTTLELHTQSPEAAGSR	4	AHTEAEALPNTTLELHTQSPEAAGSR4	218838	207490	244339
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	AHTESCSCSLPQSPHADNTTPGAPAR	AHTESC(UniMod:4)SC(UniMod:4)SLPQSPHADNTTPGAPAR	3	AHTESC(UniMod:4)SC(UniMod:4)SLPQSPHADNTTPGAPAR3	86695.3	67450.8	73091
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	AHTESCSCSLPQSPHADNTTPGAPAR	AHTESC(UniMod:4)SC(UniMod:4)SLPQSPHADNTTPGAPAR	4	AHTESC(UniMod:4)SC(UniMod:4)SLPQSPHADNTTPGAPAR4	1.12282e+06	1.20731e+06	1.21645e+06
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	AHTESCSCSLPQSPHADNTTPGAPARK	AHTESC(UniMod:4)SC(UniMod:4)SLPQSPHADNTTPGAPARK	4	AHTESC(UniMod:4)SC(UniMod:4)SLPQSPHADNTTPGAPARK4	87843.5	98429.1	129783
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	AHTMTDDVTFWK	AHTMTDDVTFWK	2	AHTMTDDVTFWK2	87035.7	113034	84223.7
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	AHTMTDDVTFWK	AHTMTDDVTFWK	3	AHTMTDDVTFWK3	539601	563982	612515
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	AHTPSVDPSSQAR	AHTPSVDPSSQAR	2	AHTPSVDPSSQAR2	33242.5	25193	17743.5
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	AHTPSVDPSSQAR	AHTPSVDPSSQAR	3	AHTPSVDPSSQAR3	88796.1	105239	111437
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	AHTRPLNLSQLSFHR	AHTRPLNLSQLSFHR	4	AHTRPLNLSQLSFHR4	8542.02	9597.58	8550.33
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	AHTSSTQLQEELEK	AHTSSTQLQEELEK	2	AHTSSTQLQEELEK2	8084.34	6316.83	4674.47
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	AHTSSTQLQEELEK	AHTSSTQLQEELEK	3	AHTSSTQLQEELEK3	39054.3	46610.4	32460.3
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	AHTYLGIEK	AHTYLGIEK	2	AHTYLGIEK2	36981.8	58414.2	42451
Q5XIQ8	Q5XIQ8	Q5XIQ8_RAT	Chpf	Hexosyltransferase	1	AHVAELER	AHVAELER	2	AHVAELER2	4321.34	8255.65	
A0A0G2K542	A0A0G2K542	A0A0G2K542_RAT	Ugp2	UTP--glucose-1-phosphate uridylyltransferase	1	AHVDEFK	AHVDEFK	2	AHVDEFK2	25006.4	23738.7	10287.3
P56522	P56522	ADRO_RAT	Fdxr	NADPH:adrenodoxin oxidoreductase, mitochondrial	1	AHVDIYEK	AHVDIYEK	2	AHVDIYEK2	3735.11	3697.56	7536.28
P05508	P05508	NU4M_RAT	Mtnd4	NADH-ubiquinone oxidoreductase chain 4	1	AHVEAPIAGSMILAAILLK	AHVEAPIAGSMILAAILLK	3	AHVEAPIAGSMILAAILLK3		3708.3	4031.6
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	AHVEDSDLIYK	AHVEDSDLIYK	2	AHVEDSDLIYK2	4096.52		3639.36
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	AHVEDTLAEIQVSLTR	AHVEDTLAEIQVSLTR	3	AHVEDTLAEIQVSLTR3	11148.1	12148.6	12920.4
Q9Z2X5	Q9Z2X5	HOME3_RAT	Homer3	Homer protein homolog 3	1	AHVFQIDPATK	AHVFQIDPATK	3	AHVFQIDPATK3	10508.6	15697.7	16415.5
Q9Z2X5	Q9Z2X5	HOME3_RAT	Homer3	Homer protein homolog 3	1	AHVFQIDPATKR	AHVFQIDPATKR	3	AHVFQIDPATKR3	11157.5	8386.66	9272.61
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	AHVIVMAATNRPNSIDPALR	AHVIVMAATNRPNSIDPALR	3	AHVIVMAATNRPNSIDPALR3	377692	317850	332190
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	AHVIVMAATNRPNSIDPALR	AHVIVMAATNRPNSIDPALR	4	AHVIVMAATNRPNSIDPALR4	862177	844363	865593
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	AHVIVMAATNRPNSIDPALRR	AHVIVMAATNRPNSIDPALRR	3	AHVIVMAATNRPNSIDPALRR3	12020.6	20409.7	10927.1
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	AHVIVMAATNRPNSIDPALRR	AHVIVMAATNRPNSIDPALRR	4	AHVIVMAATNRPNSIDPALRR4	198975	214837	251926
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	AHVLAHSESINVIAQSLSTENIK	AHVLAHSESINVIAQSLSTENIK	3	AHVLAHSESINVIAQSLSTENIK3	28222.4	20082.2	30281.8
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	AHVLAHSESINVIAQSLSTENIK	AHVLAHSESINVIAQSLSTENIK	4	AHVLAHSESINVIAQSLSTENIK4	7653.47	11309.2	17196.3
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	AHVLYFK	AHVLYFK	2	AHVLYFK2	12042.8	5149.53	8796
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	AHVPPQK	AHVPPQK	2	AHVPPQK2			91242.5
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	AHVSFKPTVAQQR	AHVSFKPTVAQQR	2	AHVSFKPTVAQQR2	15393.3	13231.5	12664.8
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	AHVSFKPTVAQQR	AHVSFKPTVAQQR	3	AHVSFKPTVAQQR3	40927.4	45488.4	42624.9
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	AHVSFKPTVAQQRK	AHVSFKPTVAQQRK	3	AHVSFKPTVAQQRK3	24277.5	20402.4	39046.5
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	AHVSFKPTVAQQRK	AHVSFKPTVAQQRK	4	AHVSFKPTVAQQRK4	99526	103791	158719
A0A0G2K4S5	A0A8I5YC56;A0A8I5ZTS2;A0A8J8YPS9;D3ZKI0;A0A0G2K4S5;A0A8J8XB15;F1LQF2	A0A0G2K4S5_RAT	RT1-CE1	RT1 class Ia, locus A2	0	AHVTLHPRPEGDVTLR	AHVTLHPRPEGDVTLR	4	AHVTLHPRPEGDVTLR4	32672	30839	30051.1
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AHVVPCFDASK	AHVVPC(UniMod:4)FDASK	2	AHVVPC(UniMod:4)FDASK2	3.03054e+06	2.99884e+06	3.17171e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AHVVPCFDASK	AHVVPC(UniMod:4)FDASK	3	AHVVPC(UniMod:4)FDASK3	7.68787e+06	7.18143e+06	8.36116e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AHVVPCFDASKVK	AHVVPC(UniMod:4)FDASKVK	3	AHVVPC(UniMod:4)FDASKVK3	4279.58	2746.88	5874.18
P58405	P58405	STRN3_RAT	Strn3	Striatin-3	1	AHWEVER	AHWEVER	2	AHWEVER2	43373.7	42328.2	35090.8
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	AHWTPFEGQK	AHWTPFEGQK	2	AHWTPFEGQK2	7480.08	8269.11	
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	AHWTPFEGQK	AHWTPFEGQK	3	AHWTPFEGQK3	43107.6	35033.7	42938.9
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	AHYDSFSLEPESDHYR	AHYDSFSLEPESDHYR	2	AHYDSFSLEPESDHYR2	6731.88	8470.45	10751.5
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	AHYDSFSLEPESDHYR	AHYDSFSLEPESDHYR	3	AHYDSFSLEPESDHYR3	208711	198638	207909
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	AHYDSFSLEPESDHYR	AHYDSFSLEPESDHYR	4	AHYDSFSLEPESDHYR4	260004	267077	286593
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	AHYGGFTVQTEANK	AHYGGFTVQTEANK	2	AHYGGFTVQTEANK2	4.43825e+06	4.84461e+06	4.57887e+06
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	AHYGGFTVQTEANK	AHYGGFTVQTEANK	3	AHYGGFTVQTEANK3	9.37088e+06	1.00232e+07	1.14714e+07
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	AHYGGFTVQTEANKYQVSVNK	AHYGGFTVQTEANKYQVSVNK	3	AHYGGFTVQTEANKYQVSVNK3	21013.5	21809.3	23632
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	AHYGGFTVQTEANKYQVSVNK	AHYGGFTVQTEANKYQVSVNK	4	AHYGGFTVQTEANKYQVSVNK4	61589.9	65021.9	67559.7
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	AHYGGFTVQTEANKYQVSVNKYK	AHYGGFTVQTEANKYQVSVNKYK	4	AHYGGFTVQTEANKYQVSVNKYK4	8205.15	18871.6	17002.8
D3ZER6	D3ZER6	D3ZER6_RAT	Tnpo2	Transportin 2	1	AHYQSFPPPVADFIK	AHYQSFPPPVADFIK	3	AHYQSFPPPVADFIK3	17365.8	14619.7	11353.5
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	AHYSHTMPMR	AHYSHTMPMR	3	AHYSHTMPMR3	8070.59	9175.77	5002.39
A0A096MK61	A0A096MK61	A0A096MK61_RAT	Crtap	Cartilage associated protein-like 1	1	AIAAAHTYLLK	AIAAAHTYLLK	3	AIAAAHTYLLK3	19955.4	9927.3	17535.4
D3ZML4	D3ZML4	D3ZML4_RAT	Trabd	TraB domain containing	1	AIAALSFWQK	AIAALSFWQK	2	AIAALSFWQK2	6791.46	4258.36	6015.3
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	AIACVVTASSTELEK	AIAC(UniMod:4)VVTASSTELEK	2	AIAC(UniMod:4)VVTASSTELEK2	3038.21	8420.26	
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AIADMLR	AIADMLR	2	AIADMLR2	2.13161e+06	3.1086e+06	3.41647e+06
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	AIADYLR	AIADYLR	2	AIADYLR2	133258	117331	118612
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	AIAEGLGSELLVGTTK	AIAEGLGSELLVGTTK	2	AIAEGLGSELLVGTTK2	11467.4	9906.05	11255.6
P21913	P21913	SDHB_RAT	Sdhb	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial	1	AIAEIKK	AIAEIKK	2	AIAEIKK2	28252.2	29631.9	26941.1
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	AIAELGIYPAVDPLDSTSR	AIAELGIYPAVDPLDSTSR	3	AIAELGIYPAVDPLDSTSR3	152417	153539	165264
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	AIAGTGANVIVTGGK	AIAGTGANVIVTGGK	2	AIAGTGANVIVTGGK2	258923	227454	264414
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	AIAGTGANVIVTGGK	AIAGTGANVIVTGGK	3	AIAGTGANVIVTGGK3		5744.45	3564.72
Q5RK09	Q5RK09	EIF3G_RAT	Eif3g	Eukaryotic translation initiation factor 3 subunit G	1	AIAGVSGFGYDHLILNVEWAK	AIAGVSGFGYDHLILNVEWAK	3	AIAGVSGFGYDHLILNVEWAK3	13217.6	23201.4	13266.1
Q5RK09	Q5RK09	EIF3G_RAT	Eif3g	Eukaryotic translation initiation factor 3 subunit G	1	AIAGVSGFGYDHLILNVEWAKPSTN	AIAGVSGFGYDHLILNVEWAKPSTN	3	AIAGVSGFGYDHLILNVEWAKPSTN3	20468.2	25849.8	20643.8
P60570	P60570	PANX1_RAT	Panx1	Pannexin-1	1	AIAHLATEYVFSDFLLK	AIAHLATEYVFSDFLLK	3	AIAHLATEYVFSDFLLK3	9819.74	3614.22	4513.45
P60570	P60570	PANX1_RAT	Panx1	Pannexin-1	1	AIAHLATEYVFSDFLLKEPTEPK	AIAHLATEYVFSDFLLKEPTEPK	4	AIAHLATEYVFSDFLLKEPTEPK4	12353.6	6140.24	16756.8
P54921	P85969;P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	0	AIAHYEQSADYYK	AIAHYEQSADYYK	2	AIAHYEQSADYYK2	31505.3	24684.1	17251.6
P54921	P85969;P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	0	AIAHYEQSADYYK	AIAHYEQSADYYK	3	AIAHYEQSADYYK3	155584	151073	102309
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	AIAIPVDLDSQVNNLFLK	AIAIPVDLDSQVNNLFLK	3	AIAIPVDLDSQVNNLFLK3	9924.34	4521.72	4464.71
D4ABB8	D4ABB8	ATP9B_RAT	Atp9b	Probable phospholipid-transporting ATPase IIB	1	AIALCHNVTPVYEAR	AIALC(UniMod:4)HNVTPVYEAR	3	AIALC(UniMod:4)HNVTPVYEAR3	16760.1	13852.5	22213.1
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	AIALSLAESNR	AIALSLAESNR	2	AIALSLAESNR2	9447.88	25502.3	15654.9
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	AIAMSLGQDIPMDQR	AIAMSLGQDIPMDQR	2	AIAMSLGQDIPMDQR2	40876.6	52749.7	32769.5
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	AIAMSLGQDIPMDQR	AIAMSLGQDIPMDQR	3	AIAMSLGQDIPMDQR3	27211.3	38936.5	23256.7
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	AIANECQANFISIK	AIANEC(UniMod:4)QANFISIK	2	AIANEC(UniMod:4)QANFISIK2	166235	179375	228876
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	AIANECQANFISIK	AIANEC(UniMod:4)QANFISIK	3	AIANEC(UniMod:4)QANFISIK3	30512.8	28095	36114.1
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	AIANVFQNR	AIANVFQNR	2	AIANVFQNR2	59362.2	52583.3	47454.1
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	AIAQLFEK	AIAQLFEK	2	AIAQLFEK2	344719	346430	358652
D3ZF26	D3ZF26	D3ZF26_RAT	Tnks1bp1	Tankyrase 1 binding protein 1	1	AIAQQDQEFGK	AIAQQDQEFGK	2	AIAQQDQEFGK2	3850.14	2982.66	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	AIAQSQSVQESMESLLQSMK	AIAQSQSVQESMESLLQSMK	3	AIAQSQSVQESMESLLQSMK3	3863.76	6678.93	8835.84
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	AIASAAEGGSVPPIR	AIASAAEGGSVPPIR	2	AIASAAEGGSVPPIR2	18848.4	18614.3	21438.1
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	AIASTPTER	AIASTPTER	2	AIASTPTER2	580656	554117	550240
Q9QZ81	Q9QZ81	AGO2_RAT	Ago2	Protein argonaute-2	1	AIATPVQGVWDMR	AIATPVQGVWDMR	2	AIATPVQGVWDMR2	3945.46	2775.55	4797.77
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	AIATVCGNR	AIATVC(UniMod:4)GNR	2	AIATVC(UniMod:4)GNR2	29756	17042.8	23808.3
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	AIATVSENTK	AIATVSENTK	2	AIATVSENTK2	43576.7	37713	45373.3
A0A8I5ZTA7	A0A8I5ZTA7	A0A8I5ZTA7_RAT	Lrp8	LDL receptor related protein 8	1	AIAVDPLR	AIAVDPLR	2	AIAVDPLR2		4299.04	
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AIAVTVQEMVTK	AIAVTVQEMVTK	2	AIAVTVQEMVTK2	428380	374367	355847
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AIAVTVQEMVTK	AIAVTVQEMVTK	3	AIAVTVQEMVTK3	8746.14	6937.66	6686.25
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	AIAYLNTGYQR	AIAYLNTGYQR	2	AIAYLNTGYQR2	18388.8	16003.3	5748.02
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	AICFLRPTK	AIC(UniMod:4)FLRPTK	2	AIC(UniMod:4)FLRPTK2	4218.61	2369.56	3586.22
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	AICLCHTVQVK	AIC(UniMod:4)LC(UniMod:4)HTVQVK	3	AIC(UniMod:4)LC(UniMod:4)HTVQVK3	73873.7	82140.1	59484.8
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	AICLDHAK	AIC(UniMod:4)LDHAK	2	AIC(UniMod:4)LDHAK2	56476.2	49107.5	31531.7
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	AICTEAGLMALR	AIC(UniMod:4)TEAGLMALR	2	AIC(UniMod:4)TEAGLMALR2	69988.1	49474.1	62321.8
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	AICTEAGLMALR	AIC(UniMod:4)TEAGLMALR	3	AIC(UniMod:4)TEAGLMALR3	2701.34	6181.81	4896.13
Q3KRD0	Q3KRD0	SYDM_RAT	Dars2	Aspartate--tRNA ligase, mitochondrial	1	AICVHEGAK	AIC(UniMod:4)VHEGAK	2	AIC(UniMod:4)VHEGAK2	1016.55		
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	AIDENNESTACFLIR	AIDENNESTAC(UniMod:4)FLIR	2	AIDENNESTAC(UniMod:4)FLIR2	14794	33198.7	30333
B5DF98	B5DF98	B5DF98_RAT	Map3k3	Mitogen activated protein kinase kinase kinase 3	1	AIDILDR	AIDILDR	2	AIDILDR2	35905.6	32738	27342.4
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	AIDIYEQVGTSAMDSPLLK	AIDIYEQVGTSAMDSPLLK	3	AIDIYEQVGTSAMDSPLLK3	49923.8	44948.7	33623.9
P50503	P50503;A0A8I6GLD3	F10A1_RAT	St13	Hsc70-interacting protein	0	AIDLFTDAIK	AIDLFTDAIK	2	AIDLFTDAIK2	592397	659320	647210
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	AIDLLKEIYTNLGPR	AIDLLKEIYTNLGPR	3	AIDLLKEIYTNLGPR3		9136.92	20754.4
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	AIDMFNK	AIDMFNK	2	AIDMFNK2	189796	144178	186469
D3ZUJ9	D3ZUJ9	D3ZUJ9_RAT	Snx8	Sorting nexin 8	1	AIDNAADLLIFGK	AIDNAADLLIFGK	2	AIDNAADLLIFGK2	4983.32		
P50745	P50745	SH2B3_RAT	Sh2b3	SH2B adapter protein 3	1	AIDNQYTPLSQLCR	AIDNQYTPLSQLC(UniMod:4)R	2	AIDNQYTPLSQLC(UniMod:4)R2	3690.55	3384.98	3553.13
F1MAF5	F1MAF5	F1MAF5_RAT	Pcid2	PCI domain-containing protein 2	1	AIDSSNLK	AIDSSNLK	2	AIDSSNLK2	3541.67	3072.5	3435.6
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	AIDTIYQTTDFSGIR	AIDTIYQTTDFSGIR	2	AIDTIYQTTDFSGIR2	66718.8	63428.6	82432.2
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	AIDTIYQTTDFSGIR	AIDTIYQTTDFSGIR	3	AIDTIYQTTDFSGIR3	11326.2	11935.2	12815.2
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	AIDTNGMEEQEKEK	AIDTNGMEEQEKEK	3	AIDTNGMEEQEKEK3	10043.3	10996.6	9063.96
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	AIDTSQLFSIPK	AIDTSQLFSIPK	2	AIDTSQLFSIPK2	47145.5	54841.7	47944.2
P25093	P25093	FAAA_RAT	Fah	Fumarylacetoacetase	1	AIDVGQGQTR	AIDVGQGQTR	2	AIDVGQGQTR2	13169.3	6825.37	7942.23
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	AIDVTIDSHPVPGAK	AIDVTIDSHPVPGAK	2	AIDVTIDSHPVPGAK2	7224.23	3788.41	5944.3
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	AIDVTIDSHPVPGAK	AIDVTIDSHPVPGAK	3	AIDVTIDSHPVPGAK3	215449	245533	248803
P0C2X9	P0C2X9	AL4A1_RAT	Aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1	AIEAAVLAR	AIEAAVLAR	2	AIEAAVLAR2	60677.2	42909.3	63244.2
D3ZAI6	D3ZAI6	D3ZAI6_RAT	Nt5dc3	5'-nucleotidase domain containing 3	1	AIEADIEK	AIEADIEK	2	AIEADIEK2	38198.8	42255.8	48279.8
Q9Z2Z8	Q9Z2Z8	DHCR7_RAT	Dhcr7	7-dehydrocholesterol reductase	1	AIECSYTSADGLK	AIEC(UniMod:4)SYTSADGLK	2	AIEC(UniMod:4)SYTSADGLK2	16737.4	29115.3	34446.3
B2RZD7	B2RZD7	LYRM9_RAT	Lyrm9	LYR motif-containing protein 9	1	AIEDADWIMNK	AIEDADWIMNK	2	AIEDADWIMNK2	7040.01	6634	6528.91
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	AIEDMTEEAFQK	AIEDMTEEAFQK	2	AIEDMTEEAFQK2	8189.86	7946.68	11066.4
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	AIEDYVNEFSAR	AIEDYVNEFSAR	2	AIEDYVNEFSAR2	2.89219e+06	2.24697e+06	2.26357e+06
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	AIEDYVNEFSAR	AIEDYVNEFSAR	3	AIEDYVNEFSAR3	48913.8	28417.1	49506.6
F1LXS3	F1LXS3	F1LXS3_RAT	Matn2	Matrilin 2	1	AIEEELQEIASEPIDK	AIEEELQEIASEPIDK	2	AIEEELQEIASEPIDK2		2322.02	1339.76
P13668	P13668	STMN1_RAT	Stmn1	Stathmin	1	AIEENNNFSK	AIEENNNFSK	2	AIEENNNFSK2			19783.9
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	AIEFCIAR	AIEFC(UniMod:4)IAR	2	AIEFC(UniMod:4)IAR2	38700.3	30638.4	57967.5
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	AIEGFSR	AIEGFSR	2	AIEGFSR2	78820.8	71101.5	61216.2
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	AIEHAYQYGGTANSR	AIEHAYQYGGTANSR	2	AIEHAYQYGGTANSR2	1493.01	2209.57	
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	AIEHAYQYGGTANSR	AIEHAYQYGGTANSR	3	AIEHAYQYGGTANSR3	21600.5	13968.9	20074.8
Q6TA25	Q6TA25	FGOP2_RAT	Fgfr1op2	FGFR1 oncogene partner 2 homolog	1	AIEIDEQQGCK	AIEIDEQQGC(UniMod:4)K	2	AIEIDEQQGC(UniMod:4)K2	113450	79492.3	99240.9
Q6TA25	Q6TA25	FGOP2_RAT	Fgfr1op2	FGFR1 oncogene partner 2 homolog	1	AIEIDEQQGCKEQER	AIEIDEQQGC(UniMod:4)KEQER	3	AIEIDEQQGC(UniMod:4)KEQER3	28878.4	25742.1	23512.8
P50503	P50503;A0A8I5ZKD8;A0A8I6GLD3	F10A1_RAT	St13	Hsc70-interacting protein	0	AIEINPDSAQPYK	AIEINPDSAQPYK	2	AIEINPDSAQPYK2	691088	751997	648752
P50503	P50503;A0A8I5ZKD8;A0A8I6GLD3	F10A1_RAT	St13	Hsc70-interacting protein	0	AIEINPDSAQPYK	AIEINPDSAQPYK	3	AIEINPDSAQPYK3	15532.7	14626.3	20275.1
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	AIEIYTDMGR	AIEIYTDMGR	2	AIEIYTDMGR2	436871	344703	286007
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	AIELFIR	AIELFIR	2	AIELFIR2	21172.6	22216.6	14751.3
Q8K1Q0	Q8K1Q0	NMT1_RAT	Nmt1	Glycylpeptide N-tetradecanoyltransferase 1	1	AIELFSVGQGPAK	AIELFSVGQGPAK	2	AIELFSVGQGPAK2	18845.3	11062.2	7285.79
Q792I0	Q792I0;Q9Z250	LIN7C_RAT	Lin7c	Protein lin-7 homolog C	0	AIELLEK	AIELLEK	2	AIELLEK2	71479.3	71919.9	64589
A0A8I6AW91	A0A8I6AW91	A0A8I6AW91_RAT	Srp72	Signal recognition particle subunit SRP72	1	AIELLQEFSDQHPENAAEIK	AIELLQEFSDQHPENAAEIK	3	AIELLQEFSDQHPENAAEIK3		2350.29	7512.31
O70593	O70593	SGTA_RAT	Sgta	Small glutamine-rich tetratricopeptide repeat-containing protein alpha	1	AIELNPANAVYFCNR	AIELNPANAVYFC(UniMod:4)NR	2	AIELNPANAVYFC(UniMod:4)NR2	93861.9	93371	67494.3
O70593	O70593	SGTA_RAT	Sgta	Small glutamine-rich tetratricopeptide repeat-containing protein alpha	1	AIELNPANAVYFCNR	AIELNPANAVYFC(UniMod:4)NR	3	AIELNPANAVYFC(UniMod:4)NR3	56793.1	55045.9	53310.3
Q4G069	Q4G069	RMD1_RAT	Rmdn1	Regulator of microtubule dynamics protein 1	1	AIELNPK	AIELNPK	2	AIELNPK2	34372.9	35439.2	39896.7
Q66H15	Q66H15	RMD3_RAT	Rmdn3	Regulator of microtubule dynamics protein 3	1	AIELQPEDPR	AIELQPEDPR	2	AIELQPEDPR2	45792.1	33853.5	43257.3
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	AIELQPHFPDAYCNLANALK	AIELQPHFPDAYC(UniMod:4)NLANALK	3	AIELQPHFPDAYC(UniMod:4)NLANALK3	4725.51	6477.27	18359.8
B5DF55	B5DF55	B5DF55_RAT	Stam	Signal transducing adaptor molecule	1	AIELSLK	AIELSLK	2	AIELSLK2	40470	40203.9	38988.8
Q5XHY7	Q5XHY7	STAM2_RAT	Stam2	Signal transducing adapter molecule 2	1	AIELSLQEQK	AIELSLQEQK	2	AIELSLQEQK2	17565.6	22270.3	18915.3
A0A0G2JWA3	A0A0G2JWA3	A0A0G2JWA3_RAT	Xpo7	Exportin 7	1	AIELWYHDPACTTPVLK	AIELWYHDPAC(UniMod:4)TTPVLK	3	AIELWYHDPAC(UniMod:4)TTPVLK3	3323.92	4113.54	4919.42
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	AIEMELR	AIEMELR	2	AIEMELR2	229495	246326	244645
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	AIEMLGGELGSK	AIEMLGGELGSK	2	AIEMLGGELGSK2	235232	232574	249076
O70436	O70436	SMAD2_RAT	Smad2	Mothers against decapentaplegic homolog 2	1	AIENCEYAFSLK	AIENC(UniMod:4)EYAFSLK	2	AIENC(UniMod:4)EYAFSLK2	2739.1	5067.8	2663.05
Q08850	Q08850	STX4_RAT	Stx4	Syntaxin-4	1	AIEPQKEEADENYNSVNTR	AIEPQKEEADENYNSVNTR	3	AIEPQKEEADENYNSVNTR3	10867.1	11402.1	5983.52
Q9NQR8	Q9NQR8	NDUF4_RAT	Ndufaf4	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4	1	AIEPQQQPK	AIEPQQQPK	2	AIEPQQQPK2	13693.8	11804.3	19440.3
A0A0G2K1P3	A0A0G2K1P3	A0A0G2K1P3_RAT	Bnip2	BCL2 interacting protein 2	1	AIEPYKK	AIEPYKK	2	AIEPYKK2	12796.4	24008.8	
B5DFI3	B5DFI3	B5DFI3_RAT	Ap1s1	AP complex subunit sigma	1	AIEQADLLQEEDESPR	AIEQADLLQEEDESPR	2	AIEQADLLQEEDESPR2	57903.4	52626.6	63806.5
B5DFI3	B5DFI3	B5DFI3_RAT	Ap1s1	AP complex subunit sigma	1	AIEQADLLQEEDESPR	AIEQADLLQEEDESPR	3	AIEQADLLQEEDESPR3	34648.1	29154.1	31088.8
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	AIEQFCQEK	AIEQFC(UniMod:4)QEK	2	AIEQFC(UniMod:4)QEK2	16622.5	11589.5	10315.6
Q9EQV9	Q9EQV9	CBPB2_RAT	Cpb2	Carboxypeptidase B2	1	AIESINK	AIESINK	2	AIESINK2	85454.4	111448	159231
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	AIETTDVTR	AIETTDVTR	2	AIETTDVTR2	53307.4	53896.5	55190.7
A0A096MKE0	A0A096MKE0	A0A096MKE0_RAT	Asph	Aspartate-beta-hydroxylase	1	AIETYQEAASLPDAPTDLVK	AIETYQEAASLPDAPTDLVK	3	AIETYQEAASLPDAPTDLVK3	10773.6	10307.2	14950.9
P04646	D4A771;A0A8L2QNQ0;A0A8L2QQD7;P04646;A0A096P6M4;A0A8I5ZW32;D3ZZN4;A0A8I6A5U8	RL35A_RAT	Rpl35a	Large ribosomal subunit protein eL33	0	AIFAGYK	AIFAGYK	2	AIFAGYK2	67262.4	70246.9	67574.8
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	AIFASGSPFDPVTLPDGR	AIFASGSPFDPVTLPDGR	2	AIFASGSPFDPVTLPDGR2	29788.5	33771.2	29103.2
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	AIFASGSPFDPVTLPDGR	AIFASGSPFDPVTLPDGR	3	AIFASGSPFDPVTLPDGR3	8392.35	11904.5	10275.6
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	AIFCISK	AIFC(UniMod:4)ISK	2	AIFC(UniMod:4)ISK2	97184.8	62031.3	106537
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	AIFHEEEPR	AIFHEEEPR	2	AIFHEEEPR2	26190	20009.5	15453.3
Q68G38	Q68G38	TOR1A_RAT	Tor1a	Torsin-1A	1	AIFIFLSNAGAER	AIFIFLSNAGAER	2	AIFIFLSNAGAER2		7224.99	3006.43
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	AIFLADGK	AIFLADGK	1	AIFLADGK1	8145.59	8721.06	2694.76
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	AIFLADGK	AIFLADGK	2	AIFLADGK2	2.47852e+06	2.55643e+06	2.63064e+06
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	AIFLADGNVFTTGFSR	AIFLADGNVFTTGFSR	2	AIFLADGNVFTTGFSR2	212610	189593	222234
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	AIFLADGNVFTTGFSR	AIFLADGNVFTTGFSR	3	AIFLADGNVFTTGFSR3	39201	30576.1	36698.4
P60522	P60522	GBRL2_RAT	Gabarapl2	Gamma-aminobutyric acid receptor-associated protein-like 2	1	AIFLFVDK	AIFLFVDK	2	AIFLFVDK2	49420.1	51210.4	63319.4
O54748	O54748;A0A8I6A0F8	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	0	AIFMIPTNPPPTFR	AIFMIPTNPPPTFR	2	AIFMIPTNPPPTFR2	590148	645352	774000
O54748	O54748;A0A8I6A0F8	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	0	AIFMIPTNPPPTFR	AIFMIPTNPPPTFR	3	AIFMIPTNPPPTFR3	56240.9	76086.3	77007.2
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	AIFQEVHVQSLLQVDR	AIFQEVHVQSLLQVDR	3	AIFQEVHVQSLLQVDR3	5449.84		
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	AIFQTIQNR	AIFQTIQNR	2	AIFQTIQNR2	205572	214302	198484
P98166	P98166	VLDLR_RAT	Vldlr	Very low-density lipoprotein receptor	1	AIFSASIDDK	AIFSASIDDK	2	AIFSASIDDK2	11467.4	15464.2	26403.9
Q69BT7	Q69BT7	TPPC4_RAT	Trappc4	Trafficking protein particle complex subunit 4	1	AIFSVYVVNK	AIFSVYVVNK	2	AIFSVYVVNK2	12941.5	15653.4	9161.18
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	AIFTGYYGK	AIFTGYYGK	2	AIFTGYYGK2	97806	98428.9	101792
Q5XIJ6	Q5XIJ6	BABA1_RAT	Babam1	BRISC and BRCA1-A complex member 1	1	AIGAQANVGSR	AIGAQANVGSR	2	AIGAQANVGSR2	86082.1	82345.4	85069.5
P24268	P24268	CATD_RAT	Ctsd	Cathepsin D	1	AIGAVPLIQGEYMIPCEK	AIGAVPLIQGEYMIPC(UniMod:4)EK	3	AIGAVPLIQGEYMIPC(UniMod:4)EK3	29845.3	28729.6	29053
Q9WVR7	Q9WVR7	PPM1F_RAT	Ppm1f	Protein phosphatase 1F	1	AIGDVFQKPYVSGEADAASR	AIGDVFQKPYVSGEADAASR	3	AIGDVFQKPYVSGEADAASR3	5090.6	9068.64	8002.86
D3ZTW9	D3ZTW9	D3ZTW9_RAT	Exog	Exo/endonuclease G	1	AIGFQSQLSEFQVSLHDLEK	AIGFQSQLSEFQVSLHDLEK	3	AIGFQSQLSEFQVSLHDLEK3		15045.6	12166.7
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	AIGGVISSPELAEDLTGTEILLER	AIGGVISSPELAEDLTGTEILLER	3	AIGGVISSPELAEDLTGTEILLER3	3620.19		5239.83
P08650	P08650	CO5_RAT	C5	Complement C5	1	AIGICPTEK	AIGIC(UniMod:4)PTEK	2	AIGIC(UniMod:4)PTEK2	765997	597160	504365
O70593	O70593	SGTA_RAT	Sgta	Small glutamine-rich tetratricopeptide repeat-containing protein alpha	1	AIGIDPGYSK	AIGIDPGYSK	2	AIGIDPGYSK2	473679	469757	436844
P11497	E9PSQ0;P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	0	AIGIGAYLVR	AIGIGAYLVR	2	AIGIGAYLVR2	18215.7	19021.5	14803
D3ZYB4	D3ZYB4;A0A0G2JW03	D3ZYB4_RAT	Lpin2	phosphatidate phosphatase	0	AIGMADMTR	AIGMADMTR	2	AIGMADMTR2	26934.9	23504.8	26229.2
F1LU71	F1LU71	AUHM_RAT	Auh	Methylglutaconyl-CoA hydratase, mitochondrial	1	AIGMALAK	AIGMALAK	2	AIGMALAK2	176149	278303	287652
P31399	P31399;A0A8I5ZWF8	ATP5H_RAT	Atp5pd	ATP synthase subunit d, mitochondrial	0	AIGNALK	AIGNALK	1	AIGNALK1			5081.03
Q4V884	Q4V884	Q4V884_RAT	Cdc16	CDC16 cell division cycle 16 homolog (S. cerevisiae)	1	AIGNEVTVDK	AIGNEVTVDK	2	AIGNEVTVDK2	33207.6	24492	32682.9
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	AIGNIELGIR	AIGNIELGIR	2	AIGNIELGIR2	4013.87	6691.08	1994.02
P34064	P34064	PSA5_RAT	Psma5	Proteasome subunit alpha type-5	1	AIGSASEGAQSSLQEVYHK	AIGSASEGAQSSLQEVYHK	3	AIGSASEGAQSSLQEVYHK3	2.875e+06	2.95825e+06	3.20394e+06
P34064	P34064	PSA5_RAT	Psma5	Proteasome subunit alpha type-5	1	AIGSASEGAQSSLQEVYHK	AIGSASEGAQSSLQEVYHK	4	AIGSASEGAQSSLQEVYHK4	9181.32	6396.13	10934.3
A0A0G2K543	A0A0G2K543	A0A0G2K543_RAT	C2cd5	C2 calcium-dependent domain containing 5	1	AIGTACTLDK	AIGTAC(UniMod:4)TLDK	2	AIGTAC(UniMod:4)TLDK2	14338.8	21747.6	17284.4
F7F4L4	F7F4L4	F7F4L4_RAT	Dnajb12	DnaJ heat shock protein family (Hsp40) member B12	1	AIGTAYAVLSNPEK	AIGTAYAVLSNPEK	2	AIGTAYAVLSNPEK2	10593.3	8202.15	6160.1
Q99P39	Q99P39	NFS1_RAT	Nfs1	Cysteine desulfurase	1	AIGTDEDLAHSSIR	AIGTDEDLAHSSIR	3	AIGTDEDLAHSSIR3	21934	21174.2	24440.9
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	AIGTEPDSDVLSEIMHSFAK	AIGTEPDSDVLSEIMHSFAK	3	AIGTEPDSDVLSEIMHSFAK3	47099.6	64228.1	61959.6
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	AIGTPSVGVLLK	AIGTPSVGVLLK	2	AIGTPSVGVLLK2	52838.6	79334.6	63831.6
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	AIGVFASSLSNSQPPEVFITQSK	AIGVFASSLSNSQPPEVFITQSK	3	AIGVFASSLSNSQPPEVFITQSK3	217565	189651	203921
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	AIGVKPPR	AIGVKPPR	2	AIGVKPPR2	95286.1	133283	133806
P47860	P47860;P30835	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	0	AIGVLTSGGDAQGMNAAVR	AIGVLTSGGDAQGMNAAVR	2	AIGVLTSGGDAQGMNAAVR2	68072.9	67299.5	80546.3
P47860	P47860;P30835	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	0	AIGVLTSGGDAQGMNAAVR	AIGVLTSGGDAQGMNAAVR	3	AIGVLTSGGDAQGMNAAVR3	69461.2	63131.2	43658.4
P07943	P07943;A0A8I6A068	ALDR_RAT	Akr1b1	Aldo-keto reductase family 1 member B1	0	AIGVSNFNPLQIER	AIGVSNFNPLQIER	2	AIGVSNFNPLQIER2	26935.6	35710.2	28788.2
P07943	P07943;A0A8I6A068	ALDR_RAT	Akr1b1	Aldo-keto reductase family 1 member B1	0	AIGVSNFNPLQIER	AIGVSNFNPLQIER	3	AIGVSNFNPLQIER3	14936.2		
Q63060	Q63060;A0A8I6AQ25	GLPK_RAT	Gk	Glycerol kinase	0	AIGVSNQR	AIGVSNQR	2	AIGVSNQR2	116113	119775	100491
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	AIHELRK	AIHELRK	2	AIHELRK2			2409.66
Q0D2L6	Q0D2L6	Q0D2L6_RAT	Rragc	Ras-related GTP-binding protein	1	AIHEVFEVGVTSHR	AIHEVFEVGVTSHR	2	AIHEVFEVGVTSHR2	1032.91		
Q0D2L6	Q0D2L6	Q0D2L6_RAT	Rragc	Ras-related GTP-binding protein	1	AIHEVFEVGVTSHR	AIHEVFEVGVTSHR	3	AIHEVFEVGVTSHR3	15101.4	12211.4	13370.3
Q0D2L6	Q0D2L6	Q0D2L6_RAT	Rragc	Ras-related GTP-binding protein	1	AIHEVFEVGVTSHR	AIHEVFEVGVTSHR	4	AIHEVFEVGVTSHR4	20194.1	19149.1	16928.8
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	AIHLLLR	AIHLLLR	2	AIHLLLR2	6523	5078.41	5127.71
P40241	P40241	CD9_RAT	Cd9	CD9 antigen	1	AIHMALNCCGIAGGVEQFISDICPK	AIHMALNC(UniMod:4)C(UniMod:4)GIAGGVEQFISDIC(UniMod:4)PK	3	AIHMALNC(UniMod:4)C(UniMod:4)GIAGGVEQFISDIC(UniMod:4)PK3	1.61177e+06	1.47625e+06	1.23698e+06
P40241	P40241	CD9_RAT	Cd9	CD9 antigen	1	AIHMALNCCGIAGGVEQFISDICPK	AIHMALNC(UniMod:4)C(UniMod:4)GIAGGVEQFISDIC(UniMod:4)PK	4	AIHMALNC(UniMod:4)C(UniMod:4)GIAGGVEQFISDIC(UniMod:4)PK4	52136.4	50372.4	51179.7
A0A8I6G251	A0A8I6G251	A0A8I6G251_RAT	Tnpo3	Transportin 3	1	AIHNICSVCR	AIHNIC(UniMod:4)SVC(UniMod:4)R	2	AIHNIC(UniMod:4)SVC(UniMod:4)R2	1545.44		
A0A0G2JWD0	A0A0G2JWD0	A0A0G2JWD0_RAT	Prom1	Prominin 1	1	AIHQQHVPPVQQSLNSLK	AIHQQHVPPVQQSLNSLK	3	AIHQQHVPPVQQSLNSLK3	21137.7	16209	11989.2
A0A0G2JWD0	A0A0G2JWD0	A0A0G2JWD0_RAT	Prom1	Prominin 1	1	AIHQQHVPPVQQSLNSLK	AIHQQHVPPVQQSLNSLK	4	AIHQQHVPPVQQSLNSLK4	17267.9	16920.3	15984
P34067	P34067	PSB4_RAT	Psmb4	Proteasome subunit beta type-4	1	AIHSWLTR	AIHSWLTR	2	AIHSWLTR2	1.03658e+06	888793	985023
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	AIHWAAYMGHIEVVK	AIHWAAYMGHIEVVK	4	AIHWAAYMGHIEVVK4	8830.08	6950.67	13274
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	AIIASNIMYIVGQYPR	AIIASNIMYIVGQYPR	3	AIIASNIMYIVGQYPR3	8603.81	10736.5	6199.24
D3ZE20	D3ZE20	D3ZE20_RAT	Nfatc1	Nuclear factor of activated T-cells 1	1	AIIDCAGILK	AIIDC(UniMod:4)AGILK	2	AIIDC(UniMod:4)AGILK2	17056.5	17034.2	21749.4
Q62656	Q62656	PTPRZ_RAT	Ptprz1	Receptor-type tyrosine-protein phosphatase zeta	1	AIIDGTESVSR	AIIDGTESVSR	2	AIIDGTESVSR2	116140	161336	143708
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	AIIEDLEPR	AIIEDLEPR	2	AIIEDLEPR2	46017.8	42225.7	30045.5
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	AIIEDVQR	AIIEDVQR	2	AIIEDVQR2	68814.6	161395	131768
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	AIIEEGDREIATK	AIIEEGDREIATK	3	AIIEEGDREIATK3	49226.7	52846.7	49229.6
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	AIIEEYLHLNDMK	AIIEEYLHLNDMK	2	AIIEEYLHLNDMK2	17924.4	14514	12467.6
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	AIIEEYLHLNDMK	AIIEEYLHLNDMK	3	AIIEEYLHLNDMK3	124723	116687	103478
Q9JHW1	Q9JHW1	CBPD_RAT	Cpd	Carboxypeptidase D	1	AIIENLIQK	AIIENLIQK	2	AIIENLIQK2	8626.83	6051.68	8765.14
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	AIIGLYNYAHEMTHGASDR	AIIGLYNYAHEMTHGASDR	3	AIIGLYNYAHEMTHGASDR3	29522.7	29952.1	33840.9
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	AIIGLYNYAHEMTHGASDR	AIIGLYNYAHEMTHGASDR	4	AIIGLYNYAHEMTHGASDR4	38573.8	36783.8	32237.6
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	AIIGLYNYAHEMTHGASDREYPR	AIIGLYNYAHEMTHGASDREYPR	4	AIIGLYNYAHEMTHGASDREYPR4	16139.7	15109	15590.9
P62083	P62083;A0A8I6GEL5;A0A8I6AEL1	RS7_RAT	Rps7	Small ribosomal subunit protein eS7	0	AIIIFVPVPQLK	AIIIFVPVPQLK	2	AIIIFVPVPQLK2	21977	20088.6	29026.4
A0A8I6GEV9	A0A8I6GEV9	A0A8I6GEV9_RAT	Abce1	ATP binding cassette subfamily E member 1	1	AIIKPQYVDQIPK	AIIKPQYVDQIPK	3	AIIKPQYVDQIPK3	20976.6	25404.9	42522.5
Q6IRK9	Q6IRK9	CBPQ_RAT	Cpq	Carboxypeptidase Q	1	AIINLAVYGK	AIINLAVYGK	2	AIINLAVYGK2	55298.4	57569.7	45208.1
Q9Z2X5	Q9Z2X5	HOME3_RAT	Homer3	Homer protein homolog 3	1	AIINSTVTPNMTFTK	AIINSTVTPNMTFTK	2	AIINSTVTPNMTFTK2	20374.8	10540.9	9785.52
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	AIIQEVCFLK	AIIQEVC(UniMod:4)FLK	2	AIIQEVC(UniMod:4)FLK2	43774.6	66339.4	72039
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	AIIQEVCFLKK	AIIQEVC(UniMod:4)FLKK	3	AIIQEVC(UniMod:4)FLKK3	2918.26	4984.69	9813.86
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	AIISWMEK	AIISWMEK	2	AIISWMEK2	20012.5	18770	26830.6
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	AIIVEFAQQGLNAALFYENKDPR	AIIVEFAQQGLNAALFYENKDPR	3	AIIVEFAQQGLNAALFYENKDPR3	19644.5	25558.1	23197.8
Q02769	Q02769	FDFT_RAT	Fdft1	Squalene synthase	1	AIIYQYIEEIYHR	AIIYQYIEEIYHR	3	AIIYQYIEEIYHR3	8931.91	6851.24	12972.3
Q5I6B8	Q5I6B8	PI51C_RAT	Pip5k1c	Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma	1	AILAEAPLVTGQPGPGHGK	AILAEAPLVTGQPGPGHGK	2	AILAEAPLVTGQPGPGHGK2	3877.46		
Q5I6B8	Q5I6B8	PI51C_RAT	Pip5k1c	Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma	1	AILAEAPLVTGQPGPGHGK	AILAEAPLVTGQPGPGHGK	3	AILAEAPLVTGQPGPGHGK3	24070.8	25229.3	21295.6
D4A5G8	D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	AILAELTGR	AILAELTGR	2	AILAELTGR2	87723.6	75002.7	79874.3
Q63515	Q63515	C4BPB_RAT	C4bpb	C4b-binding protein beta chain	1	AILAFQESK	AILAFQESK	2	AILAFQESK2	98607.4	89780.8	1.35575e+07
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	AILAQDGQR	AILAQDGQR	2	AILAQDGQR2	2.09024e+06	2.45908e+06	2.29197e+06
Q9EP80	Q9EP80	PICK1_RAT	Pick1	PRKCA-binding protein	1	AILCNDGLVK	AILC(UniMod:4)NDGLVK	2	AILC(UniMod:4)NDGLVK2	18783.6	11092.6	13872
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	AILEDLQK	AILEDLQK	2	AILEDLQK2	273849	211630	246556
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	AILEDMVK	AILEDMVK	2	AILEDMVK2	66799.4	63040.5	62600.7
Q641Z2	Q641Z2	PTN9_RAT	Ptpn9	Tyrosine-protein phosphatase non-receptor type 9	1	AILEFAER	AILEFAER	2	AILEFAER2	13165.5	18176.5	20637
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	AILEQQVLAEELTTK	AILEQQVLAEELTTK	2	AILEQQVLAEELTTK2	9020.8	11539.4	11175.8
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	AILEQQVLAEELTTK	AILEQQVLAEELTTK	3	AILEQQVLAEELTTK3	16951.8	11367.9	40257.3
A0A8J8XQI9	A0A8J8XQI9	A0A8J8XQI9_RAT	Bche	Carboxylic ester hydrolase	1	AILESGSSNAPWAVK	AILESGSSNAPWAVK	2	AILESGSSNAPWAVK2	7256.01	4477.85	8662.53
Q4KLZ6	Q4KLZ6	TKFC_RAT	Tkfc	Triokinase/FMN cyclase	1	AILEVLQTK	AILEVLQTK	2	AILEVLQTK2	15324.1	7823.89	14973.3
Q9JHW5	Q9JHW5	VAMP7_RAT	Vamp7	Vesicle-associated membrane protein 7	1	AILFAVVAR	AILFAVVAR	2	AILFAVVAR2	98612.7	106523	90286.5
Q68FR6	A0A8I5Y6C6;Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	0	AILGEVK	AILGEVK	1	AILGEVK1	34844.8	19740.8	17272.7
A0A8I6AUQ7	A0A8I6AUQ7	A0A8I6AUQ7_RAT	Zpr1	ZPR1 zinc finger	1	AILGLEQDQPTRR	AILGLEQDQPTRR	3	AILGLEQDQPTRR3	9941.57	17552.3	20935.8
Q5XHY5	Q5XHY5;A0A8I6AAW1	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	0	AILGSVER	AILGSVER	2	AILGSVER2	24694.2	27803.5	29598.4
A0A8I6GK73	A0A8I6GK73	A0A8I6GK73_RAT	Copz1	Coatomer subunit zeta	1	AILILDNDGDR	AILILDNDGDR	2	AILILDNDGDR2	321384	302395	299091
A0A8I6GK73	A0A8I6GK73	A0A8I6GK73_RAT	Copz1	Coatomer subunit zeta	1	AILILDNDGDRLFAK	AILILDNDGDRLFAK	2	AILILDNDGDRLFAK2		5432.77	9117.86
A0A8I6GK73	A0A8I6GK73	A0A8I6GK73_RAT	Copz1	Coatomer subunit zeta	1	AILILDNDGDRLFAK	AILILDNDGDRLFAK	3	AILILDNDGDRLFAK3	76587.9	99769.6	109257
A0A8I5ZKI9	A0A8I5ZKI9	A0A8I5ZKI9_RAT	Bicd1	BICD cargo adaptor 1	1	AILLANLQESQTQLEHTK	AILLANLQESQTQLEHTK	3	AILLANLQESQTQLEHTK3	6319.38		
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	AILNDTK	AILNDTK	2	AILNDTK2	59814.2	45256.1	48336.7
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	AILNLQWPYK	AILNLQWPYK	2	AILNLQWPYK2	454104	441071	433109
D3ZCT7	D3ZCT7	D3ZCT7_RAT	Sec23b	Protein transport protein SEC23	1	AILNPLCQVDYR	AILNPLC(UniMod:4)QVDYR	2	AILNPLC(UniMod:4)QVDYR2	17713	21676.1	15878.4
P04904	P04904;P00502;P04903;P46418	GSTA3_RAT	Gsta3	Glutathione S-transferase alpha-3	0	AILNYIATK	AILNYIATK	2	AILNYIATK2	54541.9	28849.3	53008.1
P30349	P30349	LKHA4_RAT	Lta4h	Leukotriene A-4 hydrolase	1	AILPCQDTPSVK	AILPC(UniMod:4)QDTPSVK	2	AILPC(UniMod:4)QDTPSVK2	28626.4	24576.7	15818.1
P47820	P47820	ACE_RAT	Ace	Angiotensin-converting enzyme	1	AILPFFPK	AILPFFPK	2	AILPFFPK2	7814.08	5825.94	12508.2
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	AILPYTK	AILPYTK	2	AILPYTK2	26429.7	28015.6	24285.3
A0A8I6A263	A0A8I6A263	A0A8I6A263_RAT	Aimp1	Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	1	AILQATLR	AILQATLR	2	AILQATLR2	69205.3	56991	65729.1
A0A8I6A263	A0A8I6A263	A0A8I6A263_RAT	Aimp1	Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	1	AILQATLREEK	AILQATLREEK	3	AILQATLREEK3	31978.4	23021.6	30099.3
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	AILQMSLDHHIVTPLTAMVIENDAGDER	AILQMSLDHHIVTPLTAMVIENDAGDER	4	AILQMSLDHHIVTPLTAMVIENDAGDER4	429568	516773	455131
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	AILQQILLLR	AILQQILLLR	2	AILQQILLLR2	34147	38731.5	46948.5
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	AILQQLGLNSTCDDSILVK	AILQQLGLNSTC(UniMod:4)DDSILVK	3	AILQQLGLNSTC(UniMod:4)DDSILVK3	37709.1	35050.4	39665.7
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	AILSCGYDLHFER	AILSC(UniMod:4)GYDLHFER	3	AILSC(UniMod:4)GYDLHFER3	5981.27	6176.98	6377.43
A0A8I5ZU67	A0A8I5ZMW1;A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	0	AILSHLVK	AILSHLVK	2	AILSHLVK2	5718.58	8482.77	5826.96
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	AILSMNGLSYGVIR	AILSMNGLSYGVIR	2	AILSMNGLSYGVIR2	5731.43	10087.3	
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	AILSQPACVSK	AILSQPAC(UniMod:4)VSK	2	AILSQPAC(UniMod:4)VSK2	18687.8	10200.1	16914.1
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	AILSTKPPGTFLLR	AILSTKPPGTFLLR	2	AILSTKPPGTFLLR2	11542.4	10177.9	11619.2
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	AILSTKPPGTFLLR	AILSTKPPGTFLLR	3	AILSTKPPGTFLLR3	95947.1	98446.9	103990
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	AILTESENK	AILTESENK	2	AILTESENK2	22998	15747.5	11383.2
F1LSX7	F1LSX7	F1LSX7_RAT	Exosc5	Exosome component 5	1	AILTFALDSAEQK	AILTFALDSAEQK	2	AILTFALDSAEQK2	1127	2667.91	
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	AILTMDEQEDLPK	AILTMDEQEDLPK	2	AILTMDEQEDLPK2	93161.7	71804.7	90807.6
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	AILTTIGVLEEPLGNAR	AILTTIGVLEEPLGNAR	2	AILTTIGVLEEPLGNAR2	12861.5	20263.2	
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	AILTTIGVLEEPLGNAR	AILTTIGVLEEPLGNAR	3	AILTTIGVLEEPLGNAR3	14103	13257.5	14635.2
P85108	P69897;Q4QRB4;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	AILVDLEPGTMDSVR	AILVDLEPGTMDSVR	2	AILVDLEPGTMDSVR2	55749.3	55941.5	40958
P85108	P69897;Q4QRB4;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	AILVDLEPGTMDSVR	AILVDLEPGTMDSVR	3	AILVDLEPGTMDSVR3	718925	810613	787896
P61212	P61212	ARL1_RAT	Arl1	ADP-ribosylation factor-like protein 1	1	AILVVFANK	AILVVFANK	2	AILVVFANK2	114500	225612	217575
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	AIMAHMTVEEIYK	AIMAHMTVEEIYK	3	AIMAHMTVEEIYK3	7258.66	5306.66	11217.9
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	AIMAHMTVEEIYKDR	AIMAHMTVEEIYKDR	3	AIMAHMTVEEIYKDR3	13056.5		9537.86
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	AIMDAGIFIAK	AIMDAGIFIAK	2	AIMDAGIFIAK2	68434.6	78671.6	78203.8
A0A8I6A0N6	A0A8I6A0N6	A0A8I6A0N6_RAT	Dop1a	DOP1 leucine zipper like protein A	1	AIMDNLMTHDK	AIMDNLMTHDK	3	AIMDNLMTHDK3	1079.47		
Q66H59	Q66H59	NPL_RAT	Npl	N-acetylneuraminate lyase	1	AIMTLVSGIPMGPPR	AIMTLVSGIPMGPPR	2	AIMTLVSGIPMGPPR2	24559.5	25854.5	24350.8
Q66H59	Q66H59	NPL_RAT	Npl	N-acetylneuraminate lyase	1	AIMTLVSGIPMGPPR	AIMTLVSGIPMGPPR	3	AIMTLVSGIPMGPPR3	27573.2	29594.5	33687.5
Q9Z1P2	Q9QXQ0;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	AIMTYVSSFYHAFSGAQK	AIMTYVSSFYHAFSGAQK	3	AIMTYVSSFYHAFSGAQK3	2.57561e+06	2.95432e+06	3.49514e+06
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	AINFNFGYAK	AINFNFGYAK	2	AINFNFGYAK2	44886	36510.5	33103.6
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	AINISGLAHVENEEQYTQALEK	AINISGLAHVENEEQYTQALEK	3	AINISGLAHVENEEQYTQALEK3	4312.5		
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	AINLLPANTQINDIR	AINLLPANTQINDIR	2	AINLLPANTQINDIR2	39671	43632.2	29081.7
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	AINPINTFTK	AINPINTFTK	2	AINPINTFTK2	252336	239863	237501
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	AINPTMAAPGSPSLSHR	AINPTMAAPGSPSLSHR	3	AINPTMAAPGSPSLSHR3	7816.7	12948.6	9255.28
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	AINQGGLTSVAVR	AINQGGLTSVAVR	2	AINQGGLTSVAVR2	3.60111e+06	3.32906e+06	4.00099e+06
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	AINQGGLTSVAVR	AINQGGLTSVAVR	3	AINQGGLTSVAVR3	81545.5	60937.5	77803.8
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	AINQIAAALFTIHK	AINQIAAALFTIHK	2	AINQIAAALFTIHK2	10373.1	17893.6	14124.7
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	AINQIAAALFTIHK	AINQIAAALFTIHK	3	AINQIAAALFTIHK3	30622.1	37539.1	27587.2
G3V9I7	G3V9I7	G3V9I7_RAT	Adck5	AarF domain containing kinase 5	1	AINSSLGTPVDR	AINSSLGTPVDR	2	AINSSLGTPVDR2	4368.72	5752.47	4454.51
A0A8I6GLQ4	A0A8I6GLQ4	A0A8I6GLQ4_RAT	Naip5	NLR family, apoptosis inhibitory protein 5	1	AINSYGIFLK	AINSYGIFLK	2	AINSYGIFLK2	2034.17	5081.52	2924.19
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	AINTAVK	AINTAVK	1	AINTAVK1	2677.91	3395.79	2534.57
G3V8Y8	G3V8Y8	G3V8Y8_RAT	Hip1	Huntingtin interacting protein 1	1	AINTQEVAVK	AINTQEVAVK	2	AINTQEVAVK2	5008.93	11559.7	7531.96
Q6NX65	Q6NX65	PDC10_RAT	Pdcd10	Programmed cell death protein 10	1	AINVFISANR	AINVFISANR	2	AINVFISANR2	285567	333080	315317
A0A8I6ACU2	A0A8I6ACU2	A0A8I6ACU2_RAT	Ubap2l	Ubiquitin associated protein 2-like	1	AINVLLEGNPDTHSWEMVGK	AINVLLEGNPDTHSWEMVGK	3	AINVLLEGNPDTHSWEMVGK3	23879.1	14759	17154.9
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	AINVQEEK	AINVQEEK	1	AINVQEEK1	4137.19	2438.93	5324.45
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	AINVQEEK	AINVQEEK	2	AINVQEEK2	1.08098e+06	1.24958e+06	1.27005e+06
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	AIPDLTAPVAAVQAAVSNLVR	AIPDLTAPVAAVQAAVSNLVR	3	AIPDLTAPVAAVQAAVSNLVR3	2992.77	26981	37149.7
Q66H15	Q66H15	RMD3_RAT	Rmdn3	Regulator of microtubule dynamics protein 3	1	AIPGEAGDAAMLSSLPQEGQEK	AIPGEAGDAAMLSSLPQEGQEK	3	AIPGEAGDAAMLSSLPQEGQEK3	20694.2	19267.4	
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	AIPGGGALVLGQEQDK	AIPGGGALVLGQEQDK	2	AIPGGGALVLGQEQDK2	336541	393840	411109
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	AIPGGGALVLGQEQDK	AIPGGGALVLGQEQDK	3	AIPGGGALVLGQEQDK3	9956.06	13950.3	16704.4
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	AIPGGGALVLGQEQDKK	AIPGGGALVLGQEQDKK	3	AIPGGGALVLGQEQDKK3	27120.3	29495.5	23803
D3ZXJ5	D3ZXJ5	D3ZXJ5_RAT	Efl1	Elongation factor like GTPase 1	1	AIPLPEEVTR	AIPLPEEVTR	2	AIPLPEEVTR2	22742.3	14346.7	18814.5
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	AIPNQGEILVIR	AIPNQGEILVIR	2	AIPNQGEILVIR2	176555	162528	169892
Q2KJ09	Q2KJ09	UBP16_RAT	Usp16	Ubiquitin carboxyl-terminal hydrolase 16	1	AIPSFVDR	AIPSFVDR	2	AIPSFVDR2	16733.2	13725.9	17018.1
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	AIPSYMQAVK	AIPSYMQAVK	2	AIPSYMQAVK2	44990.2	55362.3	25593.5
O08874	O08874	PKN2_RAT	Pkn2	Serine/threonine-protein kinase N2	1	AIPTVNHSGTFSPQTPVPATVPVVDAR	AIPTVNHSGTFSPQTPVPATVPVVDAR	3	AIPTVNHSGTFSPQTPVPATVPVVDAR3	7108.4	6541.59	5861.88
Q6DGG0	M0RB67;Q6DGG0	PPID_RAT	Ppid	Peptidyl-prolyl cis-trans isomerase D	0	AIQAELLK	AIQAELLK	2	AIQAELLK2	23723	20116.2	17508.6
O70595	O70595	ABCB6_RAT	Abcb6	ATP-binding cassette sub-family B member 6	1	AIQASLAK	AIQASLAK	2	AIQASLAK2	38297.4	43466.7	
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	AIQDDCQVITAR	AIQDDC(UniMod:4)QVITAR	2	AIQDDC(UniMod:4)QVITAR2	21501.3	23974	28354.5
A2RUW1	A2RUW1	TOLIP_RAT	Tollip	Toll-interacting protein	1	AIQDMFPNMDR	AIQDMFPNMDR	2	AIQDMFPNMDR2	62263.3	81834.8	71418.6
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	AIQDPAFSDGIR	AIQDPAFSDGIR	2	AIQDPAFSDGIR2	44453.9	51321.9	47241.8
D3ZEJ9	D3ZEJ9	D3ZEJ9_RAT	RGD1310429	Similar to Protein Njmu-R1	1	AIQDTNNLK	AIQDTNNLK	2	AIQDTNNLK2	25914.4	14842	10998.2
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	AIQDYLSTQLMLDSDFLK	AIQDYLSTQLMLDSDFLK	3	AIQDYLSTQLMLDSDFLK3		4552.77	4703.5
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	AIQEALAK	AIQEALAK	1	AIQEALAK1	1993.54		924.508
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	AIQEALAK	AIQEALAK	2	AIQEALAK2	134883	105326	109113
Q9ES71	Q9ES71	GNPAT_RAT	Gnpat	Dihydroxyacetone phosphate acyltransferase	1	AIQEHPVILLPSHR	AIQEHPVILLPSHR	3	AIQEHPVILLPSHR3	2830.74	1004.34	
Q9ES71	Q9ES71	GNPAT_RAT	Gnpat	Dihydroxyacetone phosphate acyltransferase	1	AIQEHPVILLPSHR	AIQEHPVILLPSHR	4	AIQEHPVILLPSHR4		4557.21	
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	AIQESLLTNMEGR	AIQESLLTNMEGR	2	AIQESLLTNMEGR2	34526	26419.6	31947.3
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	AIQESLLTNMEGR	AIQESLLTNMEGR	3	AIQESLLTNMEGR3	2773.03	7814.05	5211.22
P19999	P19999	MBL1_RAT	Mbl1	Mannose-binding protein A	1	AIQEVAK	AIQEVAK	1	AIQEVAK1	6833.13	7653.31	4733.52
A0A0G2JYX9	A0A0G2JYX9	A0A0G2JYX9_RAT	Irak1	Interleukin-1 receptor-associated kinase 1	1	AIQFLHQDSPSLIHGDIK	AIQFLHQDSPSLIHGDIK	3	AIQFLHQDSPSLIHGDIK3	1541.01	2538.96	
A0A0G2JYX9	A0A0G2JYX9	A0A0G2JYX9_RAT	Irak1	Interleukin-1 receptor-associated kinase 1	1	AIQFLHQDSPSLIHGDIK	AIQFLHQDSPSLIHGDIK	4	AIQFLHQDSPSLIHGDIK4	1263.04	4204.56	2764.84
Q6IRJ7	Q6IRJ7	Q6IRJ7_RAT	Anxa7	Annexin	1	AIQGAGTQER	AIQGAGTQER	2	AIQGAGTQER2	13434.7		
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	AIQGATSHHLGQNFSK	AIQGATSHHLGQNFSK	3	AIQGATSHHLGQNFSK3	53372.7	52280.2	25799.9
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	AIQGATSHHLGQNFSK	AIQGATSHHLGQNFSK	4	AIQGATSHHLGQNFSK4	28361.7	39063.9	14211.6
P55797	P55797	APOC4_RAT	Apoc4	Apolipoprotein C-IV	1	AIQGFVQTYYEDHLK	AIQGFVQTYYEDHLK	2	AIQGFVQTYYEDHLK2	923090	945648	1.01424e+06
P55797	P55797	APOC4_RAT	Apoc4	Apolipoprotein C-IV	1	AIQGFVQTYYEDHLK	AIQGFVQTYYEDHLK	3	AIQGFVQTYYEDHLK3	4.94753e+06	227487	270988
P55797	P55797	APOC4_RAT	Apoc4	Apolipoprotein C-IV	1	AIQGFVQTYYEDHLKDLGPR	AIQGFVQTYYEDHLKDLGPR	3	AIQGFVQTYYEDHLKDLGPR3	111783	138863	169018
P55797	P55797	APOC4_RAT	Apoc4	Apolipoprotein C-IV	1	AIQGFVQTYYEDHLKDLGPR	AIQGFVQTYYEDHLKDLGPR	4	AIQGFVQTYYEDHLKDLGPR4	1.2089e+06	1.98935e+06	2.07525e+06
D3Z9C0	D3Z9C0	D3Z9C0_RAT	Mios	Meiosis regulator for oocyte development	1	AIQILNEGASSEK	AIQILNEGASSEK	2	AIQILNEGASSEK2	4497.66	2415.85	
Q6IRK9	Q6IRK9	CBPQ_RAT	Cpq	Carboxypeptidase Q	1	AIQIMYQNLQQDGLENVHLEQVR	AIQIMYQNLQQDGLENVHLEQVR	3	AIQIMYQNLQQDGLENVHLEQVR3	77734.3	57305.8	52786
Q6IRK9	Q6IRK9	CBPQ_RAT	Cpq	Carboxypeptidase Q	1	AIQIMYQNLQQDGLENVHLEQVR	AIQIMYQNLQQDGLENVHLEQVR	4	AIQIMYQNLQQDGLENVHLEQVR4	2890.6	5140.8	4727.26
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	AIQINPAFADAHSNLASIHK	AIQINPAFADAHSNLASIHK	3	AIQINPAFADAHSNLASIHK3	10907.6	4284.85	5192.72
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	AIQINPAFADAHSNLASIHK	AIQINPAFADAHSNLASIHK	4	AIQINPAFADAHSNLASIHK4	16606.4	14334.4	15615.3
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	AIQLEYSEAR	AIQLEYSEAR	2	AIQLEYSEAR2	86155.8	99636	102231
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	AIQLEYSEARR	AIQLEYSEARR	3	AIQLEYSEARR3	33056	52620.9	63348.2
Q66H09	Q66H09	Q66H09_RAT	Ttc1	Tetratricopeptide repeat domain 1	1	AIQLNPTYIR	AIQLNPTYIR	2	AIQLNPTYIR2	74130.8	78557.8	95391.4
A0A8I6AC50	A0A8I6AC50	A0A8I6AC50_RAT	Ttc13	Tetratricopeptide repeat domain 13	1	AIQLQPSAR	AIQLQPSAR	2	AIQLQPSAR2	7389.85		7934.68
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	AIQLSGTEQLEALK	AIQLSGTEQLEALK	2	AIQLSGTEQLEALK2	98920.7	90129	95755.7
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	AIQLSGTEQLEALK	AIQLSGTEQLEALK	3	AIQLSGTEQLEALK3	3404.69	2804.5	1455.91
P47197	P47197	AKT2_RAT	Akt2	RAC-beta serine/threonine-protein kinase	1	AIQMVANSLK	AIQMVANSLK	2	AIQMVANSLK2	9108.87	11925.2	6336.31
A0A8I6AZI9	A0A8I6AZI9	A0A8I6AZI9_RAT	Ubash3a	Ubiquitin associated and SH3 domain containing, A	1	AIQPSHTCQWTAALYSR	AIQPSHTC(UniMod:4)QWTAALYSR	3	AIQPSHTC(UniMod:4)QWTAALYSR3	15290	15223.6	12108.1
Q920A6	Q920A6	RISC_RAT	Scpep1	Retinoid-inducible serine carboxypeptidase	1	AIQQGTIK	AIQQGTIK	2	AIQQGTIK2	44289.2	49474.1	43254.1
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	AIQQLFGK	AIQQLFGK	2	AIQQLFGK2	42899.8	41703.1	50624.6
F7FNG5	F7FNG5	F7FNG5_RAT	Cul4a	Cullin 4A	1	AIQSSTSIR	AIQSSTSIR	2	AIQSSTSIR2	10997.8	11885.7	9427.42
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	AIQTLGYFPVGDGDFPHQK	AIQTLGYFPVGDGDFPHQK	3	AIQTLGYFPVGDGDFPHQK3		6242.49	7381
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	AIQTLHLAQNPFICDCNLK	AIQTLHLAQNPFIC(UniMod:4)DC(UniMod:4)NLK	3	AIQTLHLAQNPFIC(UniMod:4)DC(UniMod:4)NLK3	10788.5	9951.53	10875.1
Q5BJT7	Q5BJT7	CCD93_RAT	Ccdc93	Coiled-coil domain-containing protein 93	1	AIQTVVDLSDAYKPR	AIQTVVDLSDAYKPR	3	AIQTVVDLSDAYKPR3	16042.3	16148.5	16424.2
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	AIQVASR	AIQVASR	1	AIQVASR1	10060.6	11291.3	9723.9
B3DMA2	B3DMA2	ACD11_RAT	Acad11	Acyl-CoA dehydrogenase family member 11	1	AIQVHGGAGVSQDYPLANMYAIIR	AIQVHGGAGVSQDYPLANMYAIIR	3	AIQVHGGAGVSQDYPLANMYAIIR3	7050.9	12344.2	6992.9
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	AIQVYYNPDQPPK	AIQVYYNPDQPPK	2	AIQVYYNPDQPPK2	1.29077e+06	978750	1.26053e+06
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	AIQVYYNPDQPPK	AIQVYYNPDQPPK	3	AIQVYYNPDQPPK3	86768.7	62400.7	72091.3
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	AIQVYYNPDQPPKPGMIEGATQKSK	AIQVYYNPDQPPKPGMIEGATQKSK	4	AIQVYYNPDQPPKPGMIEGATQKSK4	13241.9	12448.8	3764.46
O35854	O35854	BCAT2_RAT	Bcat2	Branched-chain-amino-acid aminotransferase, mitochondrial	1	AIQYGTSAHDWMLR	AIQYGTSAHDWMLR	2	AIQYGTSAHDWMLR2	13755.1	12679.8	17147.5
O35854	O35854	BCAT2_RAT	Bcat2	Branched-chain-amino-acid aminotransferase, mitochondrial	1	AIQYGTSAHDWMLR	AIQYGTSAHDWMLR	3	AIQYGTSAHDWMLR3	110564	84274.6	81780.7
O35854	O35854	BCAT2_RAT	Bcat2	Branched-chain-amino-acid aminotransferase, mitochondrial	1	AIQYGTSAHDWMLRV	AIQYGTSAHDWMLRV	3	AIQYGTSAHDWMLRV3	23868.2	21561.1	27657.7
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	AIRDGVIEASINHEK	AIRDGVIEASINHEK	3	AIRDGVIEASINHEK3	16874.2	16759.2	24033.1
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	AIRDGVIEASINHEK	AIRDGVIEASINHEK	4	AIRDGVIEASINHEK4	2132.99	8494.98	6457
Q4V8B2	Q4V8B2	DCNL3_RAT	Dcun1d3	DCN1-like protein 3	1	AISADSIDGICAR	AISADSIDGIC(UniMod:4)AR	2	AISADSIDGIC(UniMod:4)AR2		3444.08	5394.6
Q5XIS8	Q5XIS8	MID51_RAT	Mief1	Mitochondrial dynamics protein MID51	1	AISAPTSPTR	AISAPTSPTR	2	AISAPTSPTR2	9337.75	12198.5	7975.38
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	AISCVGHLVGHLGDR	AISC(UniMod:4)VGHLVGHLGDR	3	AISC(UniMod:4)VGHLVGHLGDR3	21489.8	19385.7	11649.6
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	AISCVGHLVGHLGDR	AISC(UniMod:4)VGHLVGHLGDR	4	AISC(UniMod:4)VGHLVGHLGDR4	7798.81	11433.9	10052.7
Q63054	Q63054	ICA69_RAT	Ica1	Islet cell autoantigen 1	1	AISDTWLTVNR	AISDTWLTVNR	2	AISDTWLTVNR2	5696.38	4720.37	2735.09
P04692	P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	1	AISEELDHALNDMTSI	AISEELDHALNDMTSI	2	AISEELDHALNDMTSI2	6629.55		
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	AISEKLGQYSSPDTK	AISEKLGQYSSPDTK	2	AISEKLGQYSSPDTK2		2504.26	
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	AISEKLGQYSSPDTK	AISEKLGQYSSPDTK	3	AISEKLGQYSSPDTK3	57878.1	119951	67543.8
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	AISEKLGQYSSPDTKR	AISEKLGQYSSPDTKR	3	AISEKLGQYSSPDTKR3	17647.5	40258.1	31022.2
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	AISEKLGQYSSPDTKR	AISEKLGQYSSPDTKR	4	AISEKLGQYSSPDTKR4	2526.51	25566.1	15907.9
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	AISEPNFSVAYANMCR	AISEPNFSVAYANMC(UniMod:4)R	2	AISEPNFSVAYANMC(UniMod:4)R2	6698.58	3294.02	6421.16
Q64573	Q64573	EST1F_RAT	Ces1f	Liver carboxylesterase 1F	1	AISESGVVFLPGLLTK	AISESGVVFLPGLLTK	2	AISESGVVFLPGLLTK2	4911.25		3496.04
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	AISESGVVLTTNLDK	AISESGVVLTTNLDK	2	AISESGVVLTTNLDK2	58303.2	54913	57674.4
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	AISESGVVLTTNLDKK	AISESGVVLTTNLDKK	2	AISESGVVLTTNLDKK2	9153.88	7188.23	9843.89
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	AISESGVVLTTNLDKK	AISESGVVLTTNLDKK	3	AISESGVVLTTNLDKK3	133339	183534	174024
Q02253	Q02253	MMSA_RAT	Aldh6a1	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial	1	AISFVGSNQAGEYIFER	AISFVGSNQAGEYIFER	2	AISFVGSNQAGEYIFER2	13441.8	16182.1	
D3Z9G1	D3Z9G1	D3Z9G1_RAT	Fbxw17	F-box and WD-40 domain protein 17	1	AISGHTGTIDQLAYVSPHEYR	AISGHTGTIDQLAYVSPHEYR	4	AISGHTGTIDQLAYVSPHEYR4	3205.06	4693.67	3696.42
P81795	C9WPN6;P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	0	AISGVHTVR	AISGVHTVR	2	AISGVHTVR2	45255.5	27418.9	41645.4
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	AISHEHSPSDLEAHFVPLVK	AISHEHSPSDLEAHFVPLVK	3	AISHEHSPSDLEAHFVPLVK3	6649.06	10389.6	5753.39
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	AISHEHSPSDLEAHFVPLVK	AISHEHSPSDLEAHFVPLVK	4	AISHEHSPSDLEAHFVPLVK4	88957.5	102413	93593.6
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	AISPDKDNFHFEVK	AISPDKDNFHFEVK	3	AISPDKDNFHFEVK3	56682.8	51823.3	47777.8
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	AISPDKDNFHFEVK	AISPDKDNFHFEVK	4	AISPDKDNFHFEVK4	22905.3	24208.1	32806.1
A0A0G2JZA7	A0A0G2JZA7	A0A0G2JZA7_RAT	Cemip2	hyaluronoglucosaminidase	1	AISPQYQPVVMLEK	AISPQYQPVVMLEK	2	AISPQYQPVVMLEK2	8120.74	4744.74	7060.53
Q9QYF3	Q9QYF3	MYO5A_RAT	Myo5a	Unconventional myosin-Va	1	AISPTSATSSGR	AISPTSATSSGR	2	AISPTSATSSGR2	12253.5	12352	8628.68
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	AISPYLPR	AISPYLPR	2	AISPYLPR2	20162.1	32872.3	28855.2
O35094	O35094	TIM44_RAT	Timm44	Mitochondrial import inner membrane translocase subunit TIM44	1	AISQGVESVK	AISQGVESVK	2	AISQGVESVK2	38146.5	30377.7	25355
Q562A2	Q562A2	ZFR_RAT	Zfr	Zinc finger RNA-binding protein	1	AISSASSPQSPGDALR	AISSASSPQSPGDALR	2	AISSASSPQSPGDALR2	3486.82		
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	AISSEGARPTVDLSFQPSQPLSK	AISSEGARPTVDLSFQPSQPLSK	3	AISSEGARPTVDLSFQPSQPLSK3	11982.4	12781.6	9806.6
Q4KLJ8	Q4KLJ8	PDCL3_RAT	Pdcl3	Phosducin-like protein 3	1	AISTTCIPNYPDR	AISTTC(UniMod:4)IPNYPDR	2	AISTTC(UniMod:4)IPNYPDR2	90428.8	106470	118433
Q4KLJ8	Q4KLJ8	PDCL3_RAT	Pdcl3	Phosducin-like protein 3	1	AISTTCIPNYPDR	AISTTC(UniMod:4)IPNYPDR	3	AISTTC(UniMod:4)IPNYPDR3	13948.5	14009	15012.4
Q9WUD2	Q9WUD2	TRPV2_RAT	Trpv2	Transient receptor potential cation channel subfamily V member 2	1	AISVLEMENGYWWCR	AISVLEMENGYWWC(UniMod:4)R	2	AISVLEMENGYWWC(UniMod:4)R2		2431.4	
P80067	P80067	CATC_RAT	Ctsc	Dipeptidyl peptidase 1	1	AISYCHETMTGWVHDVLGR	AISYC(UniMod:4)HETMTGWVHDVLGR	4	AISYC(UniMod:4)HETMTGWVHDVLGR4	6716.33	3372.53	10491.5
Q5M9G9	Q5M9G9	FAKD4_RAT	Tbrg4	FAST kinase domain-containing protein 4	1	AISYHLVQKPFPMTK	AISYHLVQKPFPMTK	4	AISYHLVQKPFPMTK4	6669.87	11142.3	5396.4
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	AISYLISGYQR	AISYLISGYQR	2	AISYLISGYQR2	338953	1.41113e+07	199984
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	AISYLISGYQR	AISYLISGYQR	3	AISYLISGYQR3	975332	1.05578e+06	1.01076e+06
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	AITDIIEMDSK	AITDIIEMDSK	2	AITDIIEMDSK2	59902.9	49277.6	59571.1
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	AITEIYLTR	AITEIYLTR	2	AITEIYLTR2		3048	4734.86
P83732	A0A8I6G430;P83732	RL24_RAT	Rpl24	Large ribosomal subunit protein eL24	0	AITGASLADIMAK	AITGASLADIMAK	2	AITGASLADIMAK2	20184.3	22445.3	20656.3
A0A8I5ZN89	A0A8I5ZN89	A0A8I5ZN89_RAT	Gcdh	Glutaryl-CoA dehydrogenase	1	AITGIQAFTVEK	AITGIQAFTVEK	2	AITGIQAFTVEK2	10307.4	9330.65	7134.27
F1LQ48	F1LQ48	HNRPL_RAT	Hnrnpl	Heterogeneous nuclear ribonucleoprotein L	1	AITHLNNNFMFGQK	AITHLNNNFMFGQK	3	AITHLNNNFMFGQK3	5617.17	10047.4	12877.6
Q63663	Q63663	GBP2_RAT	Gbp2	Guanylate-binding protein 2	1	AITHYEEQMNQK	AITHYEEQMNQK	2	AITHYEEQMNQK2	6013.41	3203.07	3227.72
Q63663	Q63663	GBP2_RAT	Gbp2	Guanylate-binding protein 2	1	AITHYEEQMNQK	AITHYEEQMNQK	3	AITHYEEQMNQK3	15159.1	23313.9	25058.2
Q6AYU2	Q6AYU2	Q6AYU2_RAT	Pcbp2	Poly(rC) binding protein 2	1	AITIAGIPQSIIECVK	AITIAGIPQSIIEC(UniMod:4)VK	2	AITIAGIPQSIIEC(UniMod:4)VK2	30551.3	26944.5	19704.5
A0A8I6AH91	A0A8I6AH91	A0A8I6AH91_RAT	Pcbp1	Poly(rC) binding protein 1	1	AITIAGVPQSVTECVK	AITIAGVPQSVTEC(UniMod:4)VK	2	AITIAGVPQSVTEC(UniMod:4)VK2	54207.3	62753	41720.5
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	AITNLDVEQYR	AITNLDVEQYR	2	AITNLDVEQYR2	386861	353021	379914
Q6IE70	Q6IE70	PAN2_RAT	Pan2	PAN2-PAN3 deadenylation complex catalytic subunit Pan2	1	AITPLQVHVDPAFLR	AITPLQVHVDPAFLR	3	AITPLQVHVDPAFLR3	11759.3	16497.5	17376.5
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	AITPSPEQVFAECSQK	AITPSPEQVFAEC(UniMod:4)SQK	2	AITPSPEQVFAEC(UniMod:4)SQK2	39679.3	48936.3	30661.9
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	AITPSPEQVFAECSQK	AITPSPEQVFAEC(UniMod:4)SQK	3	AITPSPEQVFAEC(UniMod:4)SQK3	10286.1	11073.3	8281.19
A0A8I6A0R8	A0A8I6A0R8	A0A8I6A0R8_RAT	Srl	Sarcalumenin	1	AITQELPSLLGSIGLGK	AITQELPSLLGSIGLGK	2	AITQELPSLLGSIGLGK2	7540.55	8225.58	7855.74
A0A8I6A0R8	A0A8I6A0R8	A0A8I6A0R8_RAT	Srl	Sarcalumenin	1	AITQELPSLLGSIGLGK	AITQELPSLLGSIGLGK	3	AITQELPSLLGSIGLGK3	3837.83		1674.79
O35509	O35509;P62494;B5DEP2	RB11B_RAT	Rab11b	Ras-related protein Rab-11B	0	AITSAYYR	AITSAYYR	2	AITSAYYR2	1.94739e+06	1.952e+06	2.26079e+06
P57113	P57113	MAAI_RAT	Gstz1	Maleylacetoacetate isomerase	1	AITSGFNALEK	AITSGFNALEK	2	AITSGFNALEK2	18488.7	13775.7	22052.6
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	AITTSLTTK	AITTSLTTK	1	AITTSLTTK1	942.606	653.495	1451.22
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	AITTSLTTK	AITTSLTTK	2	AITTSLTTK2	279792	321564	275587
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	AITVDPIR	AITVDPIR	2	AITVDPIR2	104744	127660	103094
P48004	F1M6I7;P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	0	AITVFSPDGHLFQVEYAQEAVK	AITVFSPDGHLFQVEYAQEAVK	3	AITVFSPDGHLFQVEYAQEAVK3	1.92034e+06	1.95027e+06	1.93449e+06
P48004	F1M6I7;P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	0	AITVFSPDGHLFQVEYAQEAVK	AITVFSPDGHLFQVEYAQEAVK	4	AITVFSPDGHLFQVEYAQEAVK4	7839.06	7474.56	5345.07
P48004	F1M6I7;P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	0	AITVFSPDGHLFQVEYAQEAVKK	AITVFSPDGHLFQVEYAQEAVKK	3	AITVFSPDGHLFQVEYAQEAVKK3	153127	151451	184678
P48004	F1M6I7;P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	0	AITVFSPDGHLFQVEYAQEAVKK	AITVFSPDGHLFQVEYAQEAVKK	4	AITVFSPDGHLFQVEYAQEAVKK4	542293	504847	561165
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	AITVHPEK	AITVHPEK	1	AITVHPEK1		1571.5	1185.92
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	AITVHPEK	AITVHPEK	2	AITVHPEK2	68386.8	75614.2	53952
A0A8I5ZRG3	A0A8I5ZRG3	A0A8I5ZRG3_RAT	Frmd4b	FERM domain containing 4B	1	AIVAEHLR	AIVAEHLR	2	AIVAEHLR2	16217.5	18640.1	14000.5
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	AIVAGDQNVEYK	AIVAGDQNVEYK	2	AIVAGDQNVEYK2	445337	434501	449687
P38983	A0A8I5ZZE2;P38983	RSSA_RAT	Rpsa	Small ribosomal subunit protein uS2	0	AIVAIENPADVSVISSR	AIVAIENPADVSVISSR	2	AIVAIENPADVSVISSR2	147285	120020	99758.4
P38983	A0A8I5ZZE2;P38983	RSSA_RAT	Rpsa	Small ribosomal subunit protein uS2	0	AIVAIENPADVSVISSR	AIVAIENPADVSVISSR	3	AIVAIENPADVSVISSR3	26363	17015.7	18868.3
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	AIVDCIISIVEENPESK	AIVDC(UniMod:4)IISIVEENPESK	2	AIVDC(UniMod:4)IISIVEENPESK2	4012.99		5290.09
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	AIVDCIISIVEENPESK	AIVDC(UniMod:4)IISIVEENPESK	3	AIVDC(UniMod:4)IISIVEENPESK3	8504.98	9090.54	
D3ZHA0	D3ZHA0;A0A0G2JXT8;A0A8I5ZV49	FLNC_RAT	Flnc	Filamin-C	0	AIVDGNLK	AIVDGNLK	1	AIVDGNLK1	4306.63		3354.08
D3ZHA0	D3ZHA0;A0A0G2JXT8;A0A8I5ZV49	FLNC_RAT	Flnc	Filamin-C	0	AIVDGNLK	AIVDGNLK	2	AIVDGNLK2	137298	99808.6	118587
O88923	O88923	AGRL2_RAT	Adgrl2	Adhesion G protein-coupled receptor L2	1	AIVDSPSIYEAEQK	AIVDSPSIYEAEQK	2	AIVDSPSIYEAEQK2	3438.81	1922.16	
O88923	O88923	AGRL2_RAT	Adgrl2	Adhesion G protein-coupled receptor L2	1	AIVDTVDNLLR	AIVDTVDNLLR	2	AIVDTVDNLLR2	3930.36	3950.03	5629.38
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	AIVDVHFDPTTAFQASDVGQALLR	AIVDVHFDPTTAFQASDVGQALLR	3	AIVDVHFDPTTAFQASDVGQALLR3	11169.6	9075.13	10770.2
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	AIVEDHSLVAEEK	AIVEDHSLVAEEK	3	AIVEDHSLVAEEK3	33368.5	22121.5	37514.9
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	AIVFETGEAGSNLGAGTLPGEVR	AIVFETGEAGSNLGAGTLPGEVR	3	AIVFETGEAGSNLGAGTLPGEVR3	12835.7		
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	AIVGNNDLLWEDYEEK	AIVGNNDLLWEDYEEK	2	AIVGNNDLLWEDYEEK2	21726.5	1.69861e+06	1.79567e+06
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	AIVGNNDLLWEDYEEK	AIVGNNDLLWEDYEEK	3	AIVGNNDLLWEDYEEK3	1.20648e+06	1.18066e+06	1.3461e+06
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	AIVHAVGQELQVTGPFNLQLIAK	AIVHAVGQELQVTGPFNLQLIAK	3	AIVHAVGQELQVTGPFNLQLIAK3	6829.17	10112.1	9292.22
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	AIVHVQDFTAFWDK	AIVHVQDFTAFWDK	3	AIVHVQDFTAFWDK3	29029.4	28634.7	51436.7
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	AIVLCFR	AIVLC(UniMod:4)FR	2	AIVLC(UniMod:4)FR2	8445.73	3529.85	1360.2
Q63054	Q63054	ICA69_RAT	Ica1	Islet cell autoantigen 1	1	AIVLYQK	AIVLYQK	2	AIVLYQK2	13313.9		
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	AIVPRPEGGAQLDK	AIVPRPEGGAQLDK	3	AIVPRPEGGAQLDK3	192630	165860	212594
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	AIVQMNR	AIVQMNR	2	AIVQMNR2	126252	133068	141690
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	AIVSLAGYNATTQEILRPSELLAGVK	AIVSLAGYNATTQEILRPSELLAGVK	3	AIVSLAGYNATTQEILRPSELLAGVK3	55424.2	44581.3	43103.7
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	AIVVDPLNGWMYWTDWEEDPKDSR	AIVVDPLNGWMYWTDWEEDPKDSR	3	AIVVDPLNGWMYWTDWEEDPKDSR3	30784.3	38992.4	37761.9
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	AIVVDPVHGFMYWTDWGTPAK	AIVVDPVHGFMYWTDWGTPAK	3	AIVVDPVHGFMYWTDWGTPAK3	55769.6	56023.9	68511.3
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	AIVVTDGER	AIVVTDGER	2	AIVVTDGER2	79036.5	86560.1	68543.5
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	AIVWGMQTR	AIVWGMQTR	2	AIVWGMQTR2	74996.4	84002.2	78942.7
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	AIVWLQNR	AIVWLQNR	2	AIVWLQNR2	35040.1	37671.7	33343
P28064	P28064	PSB8_RAT	Psmb8	Proteasome subunit beta type-8	1	AIVYATHR	AIVYATHR	2	AIVYATHR2	1.05656e+06	924234	749534
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	AIWAALQTQTSNSAK	AIWAALQTQTSNSAK	2	AIWAALQTQTSNSAK2	104263	128983	116410
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	AIWAALQTQTSNSAK	AIWAALQTQTSNSAK	3	AIWAALQTQTSNSAK3	12492.1	15383.4	15558.8
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	AIWGESLTPPVSTSFTTGGLR	AIWGESLTPPVSTSFTTGGLR	3	AIWGESLTPPVSTSFTTGGLR3	52917.1	62385	39170.4
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	AIWGYCDQLK	AIWGYC(UniMod:4)DQLK	2	AIWGYC(UniMod:4)DQLK2	34344.3	51488.4	37965
D3ZRE7	D3ZRE7	D3ZRE7_RAT	Swap70	Switching B-cell complex subunit SWAP70	1	AIWHAFTALDLDR	AIWHAFTALDLDR	3	AIWHAFTALDLDR3	2108.17	2957.95	2942.87
P07895	P07895	SODM_RAT	Sod2	Superoxide dismutase [Mn], mitochondrial	1	AIWNVINWENVSQR	AIWNVINWENVSQR	2	AIWNVINWENVSQR2	757635	669688	831544
P07895	P07895	SODM_RAT	Sod2	Superoxide dismutase [Mn], mitochondrial	1	AIWNVINWENVSQR	AIWNVINWENVSQR	3	AIWNVINWENVSQR3	170228	123155	192677
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	AIYAIDLMLK	AIYAIDLMLK	2	AIYAIDLMLK2	17416.2		
A0A8I5Y6A1	A0A8I5Y6A1	A0A8I5Y6A1_RAT	Ablim1	Actin-binding LIM protein 1	1	AIYDIERPDLITYEPFYTSGYEDK	AIYDIERPDLITYEPFYTSGYEDK	3	AIYDIERPDLITYEPFYTSGYEDK3	9091.58	17934.1	10163.7
B1WBY5	B1WBY5	B1WBY5_RAT	Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	1	AIYDIYGK	AIYDIYGK	2	AIYDIYGK2	50501.2	34115.7	43330
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	AIYDTPCIQAESDK	AIYDTPC(UniMod:4)IQAESDK	2	AIYDTPC(UniMod:4)IQAESDK2	77689.7	58800.1	56380.8
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	AIYDTPCIQAESDKWQQALK	AIYDTPC(UniMod:4)IQAESDKWQQALK	3	AIYDTPC(UniMod:4)IQAESDKWQQALK3	84065.7	98425.3	93020.7
Q5I0D7	Q5I0D7	PEPD_RAT	Pepd	Xaa-Pro dipeptidase	1	AIYEAVLR	AIYEAVLR	2	AIYEAVLR2	19915.3	11867.4	15684
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	AIYELQMK	AIYELQMK	2	AIYELQMK2	41187.3	32918.1	45681.7
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	AIYHTLNLCNIDVTQK	AIYHTLNLC(UniMod:4)NIDVTQK	2	AIYHTLNLC(UniMod:4)NIDVTQK2	1320.17	2643.28	956.7
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	AIYHTLNLCNIDVTQK	AIYHTLNLC(UniMod:4)NIDVTQK	3	AIYHTLNLC(UniMod:4)NIDVTQK3	45864.2	44607.8	51499.8
Q64165	Q64165	Q64165_RAT	Gcnt1	Glucosaminyl (N-acetyl) transferase 1	1	AIYMPQNFYCIHVDR	AIYMPQNFYC(UniMod:4)IHVDR	3	AIYMPQNFYC(UniMod:4)IHVDR3	16797	20108.6	19788.2
P11507	P18596;Q64578;P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	0	AIYNNMK	AIYNNMK	1	AIYNNMK1	13567	11612.7	18090.5
P11507	P18596;Q64578;P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	0	AIYNNMK	AIYNNMK	2	AIYNNMK2	829990	971698	879803
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	AIYNSGQDHVQNEENYAQVLDK	AIYNSGQDHVQNEENYAQVLDK	3	AIYNSGQDHVQNEENYAQVLDK3	33840.4	56541.1	44660.8
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	AIYPFDGHNEGTLAMK	AIYPFDGHNEGTLAMK	2	AIYPFDGHNEGTLAMK2	27682.1	19342.5	30551.7
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	AIYPFDGHNEGTLAMK	AIYPFDGHNEGTLAMK	3	AIYPFDGHNEGTLAMK3	398990	424840	408278
P28075	P28075	PSB5_RAT	Psmb5	Proteasome subunit beta type-5	1	AIYQATYR	AIYQATYR	2	AIYQATYR2	1.63279e+06	1.59536e+06	1.7437e+06
P22734	P22734	COMT_RAT	Comt	Catechol O-methyltransferase	1	AIYQGPSSPDKS	AIYQGPSSPDKS	2	AIYQGPSSPDKS2	109993	77261.1	87851.6
D4A415	D4A415	D4A415_RAT	Abraxas2	Abraxas 2, BRISC complex subunit	1	AIYQVYNALQEK	AIYQVYNALQEK	2	AIYQVYNALQEK2	60642.3	69753.3	66644.2
D4A415	D4A415	D4A415_RAT	Abraxas2	Abraxas 2, BRISC complex subunit	1	AIYQVYNALQEK	AIYQVYNALQEK	3	AIYQVYNALQEK3	4760.83	6400.1	9060.04
P08483	P08483	ACM3_RAT	Chrm3	Muscarinic acetylcholine receptor M3	1	AIYSIVLK	AIYSIVLK	2	AIYSIVLK2	4907.38	4583.96	
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	AIYTIMGWFR	AIYTIMGWFR	2	AIYTIMGWFR2	23794.9	23959.2	28418
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	AKDDDDSDIPTAQR	AKDDDDSDIPTAQR	3	AKDDDDSDIPTAQR3	3137.31	4116.02	3878.54
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	AKDEQSAVSMLK	AKDEQSAVSMLK	3	AKDEQSAVSMLK3	11334.2	22772.7	9988.52
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	AKDINQEVYNFLATAGAK	AKDINQEVYNFLATAGAK	3	AKDINQEVYNFLATAGAK3		4452.83	
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	AKDIVPGDIVEIAVGDK	AKDIVPGDIVEIAVGDK	3	AKDIVPGDIVEIAVGDK3	10761.8	8824.41	5314.01
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	AKDIVPGDIVEIAVGDKVPADIR	AKDIVPGDIVEIAVGDKVPADIR	3	AKDIVPGDIVEIAVGDKVPADIR3	119771	131575	349920
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	AKDIVPGDIVEIAVGDKVPADIR	AKDIVPGDIVEIAVGDKVPADIR	4	AKDIVPGDIVEIAVGDKVPADIR4	71803.9	86951.8	92772
Q68FR6	Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	1	AKDPFAHLPK	AKDPFAHLPK	2	AKDPFAHLPK2	89643.2	93706	85570.2
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	AKDVLPTK	AKDVLPTK	2	AKDVLPTK2	24164.1	25168.8	18478.5
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	AKDVLPTKK	AKDVLPTKK	2	AKDVLPTKK2	23163.8		16391.3
P27791	P27791	KAPCA_RAT	Prkaca	cAMP-dependent protein kinase catalytic subunit alpha	1	AKEDFLK	AKEDFLK	2	AKEDFLK2	19390	25595.2	24407.4
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	AKEEITKVPENLLPFAVQCR	AKEEITKVPENLLPFAVQC(UniMod:4)R	4	AKEEITKVPENLLPFAVQC(UniMod:4)R4	8252.05	10266.1	5576.19
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	AKEEIYNQLLDK	AKEEIYNQLLDK	3	AKEEIYNQLLDK3	8530.88	13464.6	16400.1
E9PU37	E9PU37	E9PU37_RAT	Zdhhc13	Palmitoyltransferase	1	AKEILPLIEDSSNCDIVK	AKEILPLIEDSSNC(UniMod:4)DIVK	3	AKEILPLIEDSSNC(UniMod:4)DIVK3	4368.57	10709.4	10604.5
P62716	A0A0G2JYA4;P63331;P62716	PP2AB_RAT	Ppp2cb	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	0	AKEILTK	AKEILTK	2	AKEILTK2	24466	38364.4	
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	AKELDPTNMTYITNQAAVHFEK	AKELDPTNMTYITNQAAVHFEK	4	AKELDPTNMTYITNQAAVHFEK4	8869.54	5868.75	9219.1
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	AKELLGQGLLLR	AKELLGQGLLLR	2	AKELLGQGLLLR2	3127.01		579.667
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	AKELLGQGLLLR	AKELLGQGLLLR	3	AKELLGQGLLLR3	35096.9	30010.1	36954.7
D4AEG7	D4AEG7	D4AEG7_RAT	Tbc1d13	TBC1 domain family, member 13	1	AKELQDSK	AKELQDSK	1	AKELQDSK1			2330.57
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	AKEPTTQITEEVRDQLLEASAATR	AKEPTTQITEEVRDQLLEASAATR	4	AKEPTTQITEEVRDQLLEASAATR4	17471	10308.8	6583.09
Q8R553	Q8R553	CSTN3_RAT	Clstn3	Calsyntenin-3	1	AKEPVDCEAQK	AKEPVDC(UniMod:4)EAQK	2	AKEPVDC(UniMod:4)EAQK2			7742.99
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	AKESDLSDTLSPSK	AKESDLSDTLSPSK	3	AKESDLSDTLSPSK3	24791.3	20058.6	36696.6
B2RZ37	B2RZ37	REEP5_RAT	Reep5	Receptor expression-enhancing protein 5	1	AKETADAISK	AKETADAISK	2	AKETADAISK2			26319.5
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	AKEVEVK	AKEVEVK	2	AKEVEVK2			8526.61
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	AKEVSFDVELPK	AKEVSFDVELPK	2	AKEVSFDVELPK2	6991.91	5956.03	4462.25
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	AKEVSFDVELPK	AKEVSFDVELPK	3	AKEVSFDVELPK3	59223.4	83115.8	69765.4
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	AKFGLYSDQMR	AKFGLYSDQMR	3	AKFGLYSDQMR3	10999.1	15211.7	8467.2
Q3B7T9	Q3B7T9	RFIP1_RAT	Rab11fip1	Rab11 family-interacting protein 1	1	AKGPGGTSDAYAVIQVGK	AKGPGGTSDAYAVIQVGK	3	AKGPGGTSDAYAVIQVGK3	3751.71	8905.66	6148.37
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	AKHPMDTEITK	AKHPMDTEITK	3	AKHPMDTEITK3	2249.23	2380.35	
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	AKLLGLTLVGLVLALYK	AKLLGLTLVGLVLALYK	3	AKLLGLTLVGLVLALYK3	2014.39		8232.29
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	AKLLGLTLVGLVLALYKNHR	AKLLGLTLVGLVLALYKNHR	3	AKLLGLTLVGLVLALYKNHR3	10074.8	18522.1	18839
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	AKLLGLTLVGLVLALYKNHR	AKLLGLTLVGLVLALYKNHR	4	AKLLGLTLVGLVLALYKNHR4	233611	193068	246989
D3ZGN0	D3ZGN0	D3ZGN0_RAT	Tbc1d4	TBC1 domain family, member 4	1	AKLVIQR	AKLVIQR	2	AKLVIQR2	8231.77	4532.87	5167.75
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	AKNPYEEADHNSLAEIR	AKNPYEEADHNSLAEIR	3	AKNPYEEADHNSLAEIR3			14979.2
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	AKNPYEEADHNSLAEIR	AKNPYEEADHNSLAEIR	4	AKNPYEEADHNSLAEIR4	16989	24491.9	19549.8
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	AKPAKPPGLK	AKPAKPPGLK	2	AKPAKPPGLK2	65757.7		36844.5
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	AKPALDDLGQGLMPVLEAWK	AKPALDDLGQGLMPVLEAWK	3	AKPALDDLGQGLMPVLEAWK3	132107	103540	128231
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	AKPALDDLGQGLMPVLEAWK	AKPALDDLGQGLMPVLEAWK	4	AKPALDDLGQGLMPVLEAWK4	888039	942577	967779
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	AKPALDDLGQGLMPVLEAWKAK	AKPALDDLGQGLMPVLEAWKAK	3	AKPALDDLGQGLMPVLEAWKAK3	26391.7	13139.2	17548.3
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	AKPALDDLGQGLMPVLEAWKAK	AKPALDDLGQGLMPVLEAWKAK	4	AKPALDDLGQGLMPVLEAWKAK4	36463.8	38643	35915.9
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	AKPLATTQPAK	AKPLATTQPAK	2	AKPLATTQPAK2	11164.3	13591.1	14625.5
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	AKPPPGGEQEPPPPAPQDVEMK	AKPPPGGEQEPPPPAPQDVEMK	3	AKPPPGGEQEPPPPAPQDVEMK3	102642	138088	108920
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	AKPSTVEVLENIDK	AKPSTVEVLENIDK	3	AKPSTVEVLENIDK3	29853.4	36359.7	48707.2
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	AKPSTVEVLENIDKEIQALEEFR	AKPSTVEVLENIDKEIQALEEFR	3	AKPSTVEVLENIDKEIQALEEFR3	13233.4	24841.6	14124
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	AKPSTVEVLENIDKEIQALEEFR	AKPSTVEVLENIDKEIQALEEFR	4	AKPSTVEVLENIDKEIQALEEFR4	20619.3	14183	17686
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	AKPSYLIDK	AKPSYLIDK	2	AKPSYLIDK2	162950	150130	149760
P13086	P13086	SUCA_RAT	Suclg1	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial	1	AKPVVSFIAGITAPPGR	AKPVVSFIAGITAPPGR	2	AKPVVSFIAGITAPPGR2	12366.7	12327.5	18244.4
P13086	P13086	SUCA_RAT	Suclg1	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial	1	AKPVVSFIAGITAPPGR	AKPVVSFIAGITAPPGR	3	AKPVVSFIAGITAPPGR3	302938	306584	336659
P13086	P13086	SUCA_RAT	Suclg1	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial	1	AKPVVSFIAGITAPPGR	AKPVVSFIAGITAPPGR	4	AKPVVSFIAGITAPPGR4	6509.52	4945.27	10405.5
P13086	P13086	SUCA_RAT	Suclg1	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial	1	AKPVVSFIAGITAPPGRR	AKPVVSFIAGITAPPGRR	4	AKPVVSFIAGITAPPGRR4	22798.6	39762.8	40710.4
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	AKPVWYAGR	AKPVWYAGR	2	AKPVWYAGR2	53031.2	46785.6	44452
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	AKPVWYAGRDPAAAPATGNK	AKPVWYAGRDPAAAPATGNK	3	AKPVWYAGRDPAAAPATGNK3	17277.5	10139.7	5905.16
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	AKPVWYAGRDPAAAPATGNK	AKPVWYAGRDPAAAPATGNK	4	AKPVWYAGRDPAAAPATGNK4	20872.9	23427.8	23729.8
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	AKVPLVSNEECQTR	AKVPLVSNEEC(UniMod:4)QTR	3	AKVPLVSNEEC(UniMod:4)QTR3	6750.49	7471.1	4504.92
P15865	M0R7B4;P15865;A0A0G2K654;P06349	H14_RAT	H1-4	Histone H1.4	0	ALAAAGYDVEK	ALAAAGYDVEK	2	ALAAAGYDVEK2	26880.1	11807.5	3833.86
D3ZP13	D3ZP13	D3ZP13_RAT	Qsox2	Sulfhydryl oxidase	1	ALAADVRDWAAAIR	ALAADVRDWAAAIR	2	ALAADVRDWAAAIR2		21021.7	
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	ALAAEMTNYFSK	ALAAEMTNYFSK	2	ALAAEMTNYFSK2	38377.6	25205.8	26953.1
Q4KLF8	Q4KLF8;A0A8I6G2W5	ARPC5_RAT	Arpc5	Actin-related protein 2/3 complex subunit 5	0	ALAAGGVGSIVR	ALAAGGVGSIVR	2	ALAAGGVGSIVR2	852738	746280	863330
Q920E0	Q920E0	PAR4_RAT	F2rl3	Proteinase-activated receptor 4	1	ALAANGQR	ALAANGQR	2	ALAANGQR2	24396.1		39521.5
B2RYW9	B2RYW9	FAHD2_RAT	Fahd2	Fumarylacetoacetate hydrolase domain-containing protein 2	1	ALAAQLPLIPR	ALAAQLPLIPR	2	ALAAQLPLIPR2	50916.9	44358.6	41822.2
A0A8I6AZI9	A0A8I6AZI9	A0A8I6AZI9_RAT	Ubash3a	Ubiquitin associated and SH3 domain containing, A	1	ALAATGMK	ALAATGMK	2	ALAATGMK2	20930.4	24334.9	19723.7
B1WBW4	B1WBW4	ARM10_RAT	Armc10	Armadillo repeat-containing protein 10	1	ALACHPDVDVK	ALAC(UniMod:4)HPDVDVK	2	ALAC(UniMod:4)HPDVDVK2		3400.98	2808.5
B1WBW4	B1WBW4	ARM10_RAT	Armc10	Armadillo repeat-containing protein 10	1	ALACHPDVDVK	ALAC(UniMod:4)HPDVDVK	3	ALAC(UniMod:4)HPDVDVK3	74896.4	73303.9	87996.4
Q5XI55	Q5XI55	NGLY1_RAT	Ngly1	Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase	1	ALACIPVNELK	ALAC(UniMod:4)IPVNELK	2	ALAC(UniMod:4)IPVNELK2	3885.18	2325.63	4993.26
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	ALADEREVVQK	ALADEREVVQK	3	ALADEREVVQK3	50195.9	71748.8	69063.2
Q04400	Q04400	ADCY5_RAT	Adcy5	Adenylate cyclase type 5	1	ALADFAMK	ALADFAMK	2	ALADFAMK2	31411.6	25138.7	22021.9
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	ALADHSMAQTPR	ALADHSMAQTPR	2	ALADHSMAQTPR2	3803.36	2257.11	3001.69
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	ALADHSMAQTPR	ALADHSMAQTPR	3	ALADHSMAQTPR3	105897	91368.5	72807.8
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	ALADIVIPQEYGITK	ALADIVIPQEYGITK	2	ALADIVIPQEYGITK2	33019.6	35945.3	34671.3
P97576	P97576	GRPE1_RAT	Grpel1	GrpE protein homolog 1, mitochondrial	1	ALADTENLR	ALADTENLR	2	ALADTENLR2	14886.8		11129.3
Q8CGU6	Q8CGU6	NICA_RAT	Ncstn	Nicastrin	1	ALADVATVLAR	ALADVATVLAR	2	ALADVATVLAR2	31276.3	21608.1	27267.7
P24155	P24155	THOP1_RAT	Thop1	Thimet oligopeptidase	1	ALADVEVTYTVQR	ALADVEVTYTVQR	2	ALADVEVTYTVQR2	5860.07		
F1LU14	F1LU14	F1LU14_RAT	Snx32	Sorting nexin	1	ALADYENANK	ALADYENANK	2	ALADYENANK2	11187.1	13349.1	7047.6
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	ALADYIR	ALADYIR	2	ALADYIR2	684782	636481	631860
D3ZFQ8	D3ZFQ8	D3ZFQ8_RAT	Cyc1	Cytochrome c-1	1	ALAEEVEVQDGPNEDGNMFMR	ALAEEVEVQDGPNEDGNMFMR	3	ALAEEVEVQDGPNEDGNMFMR3	3019.12		3513.96
D3ZFQ8	D3ZFQ8	D3ZFQ8_RAT	Cyc1	Cytochrome c-1	1	ALAEEVEVQDGPNEDGNMFMRPGK	ALAEEVEVQDGPNEDGNMFMRPGK	3	ALAEEVEVQDGPNEDGNMFMRPGK3	78249.1	64172.2	57634.5
A0A0G2JTW1	A0A0G2JTW1	A0A0G2JTW1_RAT	Rap2a	Ras-related protein Rap-2	1	ALAEEWGCPFMETSAK	ALAEEWGC(UniMod:4)PFMETSAK	2	ALAEEWGC(UniMod:4)PFMETSAK2	54779.7	56307.3	61255.5
P61227	P61227	RAP2B_RAT	Rap2b	Ras-related protein Rap-2b	1	ALAEEWSCPFMETSAK	ALAEEWSC(UniMod:4)PFMETSAK	2	ALAEEWSC(UniMod:4)PFMETSAK2	459960	458923	501475
P61227	P61227	RAP2B_RAT	Rap2b	Ras-related protein Rap-2b	1	ALAEEWSCPFMETSAK	ALAEEWSC(UniMod:4)PFMETSAK	3	ALAEEWSC(UniMod:4)PFMETSAK3	20978.4	19633.7	29462.7
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	ALAEGQQR	ALAEGQQR	2	ALAEGQQR2			36698.9
P46413	P46413	GSHB_RAT	Gss	Glutathione synthetase	1	ALAEGVLLR	ALAEGVLLR	2	ALAEGVLLR2	8158.03		
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	ALAEILGPYGMK	ALAEILGPYGMK	2	ALAEILGPYGMK2	47412.6	39798.4	41834.7
Q9TPX1	Q9TPX1	Q9TPX1_RAT	Slfn4	Schlafen family member 4	1	ALAEILGSR	ALAEILGSR	2	ALAEILGSR2	31188.4	27314.1	20964.9
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	ALAELAA	ALAELAA	1	ALAELAA1	1.50999e+06	1.31267e+06	1.42703e+06
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	ALAELFGLLVK	ALAELFGLLVK	2	ALAELFGLLVK2	15198.8	10128.8	6917.09
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	ALAENSGVK	ALAENSGVK	1	ALAENSGVK1	787.143		1817.15
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	ALAENSGVK	ALAENSGVK	2	ALAENSGVK2	809183	886853	884312
Q62639	Q62639	RHEB_RAT	Rheb	GTP-binding protein Rheb	1	ALAESWNAAFLESSAK	ALAESWNAAFLESSAK	2	ALAESWNAAFLESSAK2	54367.2	56659.5	67358.4
Q62639	Q62639	RHEB_RAT	Rheb	GTP-binding protein Rheb	1	ALAESWNAAFLESSAK	ALAESWNAAFLESSAK	3	ALAESWNAAFLESSAK3	8286.69	8109.68	
Q66H50	Q66H50	FACR1_RAT	Far1	Fatty acyl-CoA reductase 1	1	ALAEYVVQQEGAK	ALAEYVVQQEGAK	2	ALAEYVVQQEGAK2	7296.89	6915.49	3303.19
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	ALAFEELR	ALAFEELR	2	ALAFEELR2	84954.1	82870.8	70829.1
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	ALAFEQLLK	ALAFEQLLK	2	ALAFEQLLK2	21188.3	29861.9	48952.8
P70483	P70483	STRN_RAT	Strn	Striatin	1	ALAFHPIEPVLITASEDHTLK	ALAFHPIEPVLITASEDHTLK	3	ALAFHPIEPVLITASEDHTLK3	65448.6	51834.2	52448.5
P70483	P70483	STRN_RAT	Strn	Striatin	1	ALAFHPIEPVLITASEDHTLK	ALAFHPIEPVLITASEDHTLK	4	ALAFHPIEPVLITASEDHTLK4	116086	110321	105209
P58405	P58405	STRN3_RAT	Strn3	Striatin-3	1	ALAFHPVEPVLVTASEDHTLK	ALAFHPVEPVLVTASEDHTLK	3	ALAFHPVEPVLVTASEDHTLK3	30982.4	18384.4	19888.6
P58405	P58405	STRN3_RAT	Strn3	Striatin-3	1	ALAFHPVEPVLVTASEDHTLK	ALAFHPVEPVLVTASEDHTLK	4	ALAFHPVEPVLVTASEDHTLK4	80412.5	74714.9	65449.1
Q9EQS0	Q9EQS0	TALDO_RAT	Taldo1	Transaldolase	1	ALAGCDFLTISPK	ALAGC(UniMod:4)DFLTISPK	2	ALAGC(UniMod:4)DFLTISPK2	13866.9	13593	10063.5
G3V6R7	G3V6R7	G3V6R7_RAT	Oxsm	3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial	1	ALAISSTK	ALAISSTK	2	ALAISSTK2	36434.1	20537.8	34203.8
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	ALAIYER	ALAIYER	2	ALAIYER2	47532.1	47789.8	67333.1
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ALALDEAVSQSAQIAEFHDK	ALALDEAVSQSAQIAEFHDK	3	ALALDEAVSQSAQIAEFHDK3	36534.2	38510.6	39691.3
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	ALALDLGSPAALR	ALALDLGSPAALR	2	ALALDLGSPAALR2	10833.3	16257.4	9682.53
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	ALALECER	ALALEC(UniMod:4)ER	2	ALALEC(UniMod:4)ER2	57890.1	65222.3	75507.8
Q3T1I9	Q3T1I9	RPAP1_RAT	Rpap1	RNA polymerase II-associated protein 1	1	ALALHVLSHIVGR	ALALHVLSHIVGR	3	ALALHVLSHIVGR3	1346.03		2642.32
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	ALALLEDEEQAVR	ALALLEDEEQAVR	2	ALALLEDEEQAVR2	56947.4	46648	56987.8
P14562	P14562	LAMP1_RAT	Lamp1	Lysosome-associated membrane glycoprotein 1	1	ALALNVFSVQVQAFR	ALALNVFSVQVQAFR	2	ALALNVFSVQVQAFR2	6448.78	24734.9	16697.8
P14562	P14562	LAMP1_RAT	Lamp1	Lysosome-associated membrane glycoprotein 1	1	ALALNVFSVQVQAFR	ALALNVFSVQVQAFR	3	ALALNVFSVQVQAFR3	5837.71	7993.93	12868.1
D3ZL95	D3ZL95	D3ZL95_RAT	Usp40	ubiquitinyl hydrolase 1	1	ALALPSVLK	ALALPSVLK	2	ALALPSVLK2	5817.97		6811.34
Q5XIM0	Q5XIM0	Q5XIM0_RAT	Bcs1l	Mitochondrial chaperone BCS1	1	ALALQQEEGK	ALALQQEEGK	2	ALALQQEEGK2	25152.3	14455.9	18519.9
P51111	P51111	HD_RAT	Htt	Huntingtin	1	ALALSCIGAAVALHPESFFSK	ALALSC(UniMod:4)IGAAVALHPESFFSK	3	ALALSC(UniMod:4)IGAAVALHPESFFSK3	3182.81	11234	
Q5M936	Q5M936	TOR3A_RAT	Tor3a	Torsin-3A	1	ALALSFHGWSGTGK	ALALSFHGWSGTGK	3	ALALSFHGWSGTGK3	49257.9	70443.3	61333.5
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	ALALVPGTPTR	ALALVPGTPTR	2	ALALVPGTPTR2	16604.9	17198.6	13067.6
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	ALAMAESTEK	ALAMAESTEK	2	ALAMAESTEK2	66006.1	55617.4	70587.9
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	ALAMGYKPK	ALAMGYKPK	2	ALAMGYKPK2	39019.8	28447.4	34212.7
Q62985	Q62985	SH2B1_RAT	Sh2b1	SH2B adapter protein 1	1	ALANDGTSPGER	ALANDGTSPGER	2	ALANDGTSPGER2			2389.52
D3ZYP9	D3ZYP9	D3ZYP9_RAT	Nlrc3	NLR family, CARD domain containing 3	1	ALANGLK	ALANGLK	1	ALANGLK1	5294.54	3689.52	
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	ALANMHESLEWLAGR	ALANMHESLEWLAGR	2	ALANMHESLEWLAGR2	1285.46	2871.91	
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	ALANMHESLEWLAGR	ALANMHESLEWLAGR	3	ALANMHESLEWLAGR3	31060.8	43131.9	28326.1
A0A8I6A1D9	A0A8I6A1D9	A0A8I6A1D9_RAT	Use1	Vesicle transport protein USE1	1	ALANQFLAPGR	ALANQFLAPGR	2	ALANQFLAPGR2	14498.7	15501.8	24741
P05065	Q6AY07;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	ALANSLACQGK	ALANSLAC(UniMod:4)QGK	2	ALANSLAC(UniMod:4)QGK2	540787	453258	459165
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	ALAPEYAK	ALAPEYAK	1	ALAPEYAK1	40195.1	40097.6	36392.3
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	ALAPEYAK	ALAPEYAK	2	ALAPEYAK2	3.94013e+06	4.15328e+06	4.38088e+06
D3ZZC1	D3ZZC1	D3ZZC1_RAT	Txndc5	protein disulfide-isomerase	1	ALAPTWEQLALGLEHSETVK	ALAPTWEQLALGLEHSETVK	3	ALAPTWEQLALGLEHSETVK3	36074.9	34591	44526.9
P15473	P15473	IBP3_RAT	Igfbp3	Insulin-like growth factor-binding protein 3	1	ALAQCAPPPTAPACTELVR	ALAQC(UniMod:4)APPPTAPAC(UniMod:4)TELVR	3	ALAQC(UniMod:4)APPPTAPAC(UniMod:4)TELVR3	29147.8	21968.7	22999.2
D3ZK56	D3ZK56	D3ZK56_RAT	Rap2c	Ras-related protein Rap-2	1	ALAQEWGCPFMETSAK	ALAQEWGC(UniMod:4)PFMETSAK	2	ALAQEWGC(UniMod:4)PFMETSAK2	17872.7	27799.5	26496.2
D3ZIT4	D3ZIT4	D3ZIT4_RAT	Anapc7	Anaphase promoting complex subunit 7	1	ALAQRPDYVK	ALAQRPDYVK	3	ALAQRPDYVK3	47547.9	33334.9	21825.9
Q3B7D0	Q3B7D0	HEM6_RAT	Cpox	Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial	1	ALAQVDGVADFSVDRWER	ALAQVDGVADFSVDRWER	3	ALAQVDGVADFSVDRWER3	5942.37	6604.32	
P51111	P51111	HD_RAT	Htt	Huntingtin	1	ALAQYLVVLSK	ALAQYLVVLSK	2	ALAQYLVVLSK2	12075.9	19307	7184.33
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	ALASCHSLMQLDDGTLVGDPLEK	ALASC(UniMod:4)HSLMQLDDGTLVGDPLEK	3	ALASC(UniMod:4)HSLMQLDDGTLVGDPLEK3	6110.55	6158.14	12001.3
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	ALASEWKPEIR	ALASEWKPEIR	2	ALASEWKPEIR2	22711.4	24458.7	23812.3
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	ALASEWKPEIR	ALASEWKPEIR	3	ALASEWKPEIR3	2.21213e+06	2.24205e+06	2.25847e+06
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	ALASIDSK	ALASIDSK	1	ALASIDSK1	10299.6	9949.93	10006.7
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	ALASIDSK	ALASIDSK	2	ALASIDSK2	1.22152e+06	1.28455e+06	1.27117e+06
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	ALASLMTYK	ALASLMTYK	2	ALASLMTYK2	390432	370612	399700
Q3B8N7	Q3B8N7	T22D4_RAT	Tsc22d4	TSC22 domain family protein 4	1	ALASPEQLAQLPSSGLPR	ALASPEQLAQLPSSGLPR	2	ALASPEQLAQLPSSGLPR2	80054.9	82103.4	77171
Q3B8N7	Q3B8N7	T22D4_RAT	Tsc22d4	TSC22 domain family protein 4	1	ALASPEQLAQLPSSGLPR	ALASPEQLAQLPSSGLPR	3	ALASPEQLAQLPSSGLPR3	44212.4	36777.8	50670.3
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	ALASQLQDSLK	ALASQLQDSLK	2	ALASQLQDSLK2	373373	474271	583395
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	ALASQLQDSLKDLK	ALASQLQDSLKDLK	3	ALASQLQDSLKDLK3	13640.2	16454	21250.1
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	ALASTCKPELQK	ALASTC(UniMod:4)KPELQK	2	ALASTC(UniMod:4)KPELQK2	3603.88	1624.09	2283.89
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	ALASTCKPELQK	ALASTC(UniMod:4)KPELQK	3	ALASTC(UniMod:4)KPELQK3	165822	165023	162241
Q5U2R9	Q5U2R9	Q5U2R9_RAT	Scfd2	Sec1 family domain containing 2	1	ALASVFSEESELSPLLQK	ALASVFSEESELSPLLQK	2	ALASVFSEESELSPLLQK2		12046	
Q5U2R9	Q5U2R9	Q5U2R9_RAT	Scfd2	Sec1 family domain containing 2	1	ALASVFSEESELSPLLQK	ALASVFSEESELSPLLQK	3	ALASVFSEESELSPLLQK3	9240.71	8690.48	6852.61
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	ALASVLLQDHIR	ALASVLLQDHIR	2	ALASVLLQDHIR2	14609.4	7693.52	10369.5
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	ALASVLLQDHIR	ALASVLLQDHIR	3	ALASVLLQDHIR3	99440.4	96152.8	102813
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	ALATNPALR	ALATNPALR	2	ALATNPALR2	99627.6	85986.8	76568.2
G3V6S0	A0A0G2K677;Q9QWN8;G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	0	ALAVEGK	ALAVEGK	1	ALAVEGK1	14770.9	10695.7	7673.28
G3V6S0	A0A0G2K677;Q9QWN8;G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	0	ALAVEGKR	ALAVEGKR	2	ALAVEGKR2	1825.91	7481.65	4849.18
A1L108	A1L108	ARP5L_RAT	Arpc5l	Actin-related protein 2/3 complex subunit 5-like protein	1	ALAVGGLGSIIR	ALAVGGLGSIIR	2	ALAVGGLGSIIR2	80586.9	63244.3	78799.3
D3ZPA1	D3ZPA1	D3ZPA1_RAT	Gcc1	GRIP and coiled-coil domain containing 1	1	ALAVLAEK	ALAVLAEK	2	ALAVLAEK2	13204.4	8445.91	32350.7
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	ALAVLLPLVK	ALAVLLPLVK	2	ALAVLLPLVK2	22100.8	21669.9	23824.3
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	ALAVMVDHLESEK	ALAVMVDHLESEK	3	ALAVMVDHLESEK3	1560.33	1643.26	3869.18
P52873	P52873	PYC_RAT	Pc	Pyruvate carboxylase, mitochondrial	1	ALAVSDLNR	ALAVSDLNR	2	ALAVSDLNR2	19297.4	15101.3	25514.8
Q9WU61	Q9WU61	CLCC1_RAT	Clcc1	Chloride channel CLIC-like protein 1	1	ALAVTFTNFVTEPLK	ALAVTFTNFVTEPLK	2	ALAVTFTNFVTEPLK2	9488.38	3932.68	8186.08
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	ALAVVCDFK	ALAVVC(UniMod:4)DFK	2	ALAVVC(UniMod:4)DFK2	23812.7	47118.6	20839
D4A4Y0	D4A4Y0	D4A4Y0_RAT	Exosc4	Exosome component 4	1	ALAVVYGPHEIR	ALAVVYGPHEIR	2	ALAVVYGPHEIR2	6480.45		6738.85
D4A4Y0	D4A4Y0	D4A4Y0_RAT	Exosc4	Exosome component 4	1	ALAVVYGPHEIR	ALAVVYGPHEIR	3	ALAVVYGPHEIR3	3308.35	2286.53	3377.96
Q5XFW6	Q5XFW6	WDR6_RAT	Wdr6	WD repeat-containing protein 6	1	ALAVWGVGTPGGPQDSHPGLTAQVVSAGGR	ALAVWGVGTPGGPQDSHPGLTAQVVSAGGR	3	ALAVWGVGTPGGPQDSHPGLTAQVVSAGGR3	7301.99	13755.4	9987.63
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	ALCAEADR	ALC(UniMod:4)AEADR	2	ALC(UniMod:4)AEADR2	337544	311003	284974
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	ALCAEADRLQQSHPLSANQIQVK	ALC(UniMod:4)AEADRLQQSHPLSANQIQVK	3	ALC(UniMod:4)AEADRLQQSHPLSANQIQVK3	5393.65		
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	ALCAEADRLQQSHPLSANQIQVK	ALC(UniMod:4)AEADRLQQSHPLSANQIQVK	4	ALC(UniMod:4)AEADRLQQSHPLSANQIQVK4	17269.5	15481.3	15497
P70541	P70541	EI2BG_RAT	Eif2b3	Translation initiation factor eIF-2B subunit gamma	1	ALCAEFK	ALC(UniMod:4)AEFK	2	ALC(UniMod:4)AEFK2	53107.5	41918.2	48688.2
Q6TEK3	Q6TEK3	VKORL_RAT	Vkorc1l1	Vitamin K epoxide reductase complex subunit 1-like protein 1	1	ALCDLGPWVK	ALC(UniMod:4)DLGPWVK	2	ALC(UniMod:4)DLGPWVK2	166859	175948	177703
F1LRI5	F1LRI5	F1LRI5_RAT	Gcn1	GCN1 activator of EIF2AK4	1	ALCDPLEEVR	ALC(UniMod:4)DPLEEVR	2	ALC(UniMod:4)DPLEEVR2	7122.19	3308.73	
Q6TEK4	Q6TEK4	VKOR1_RAT	Vkorc1	Vitamin K epoxide reductase complex subunit 1	1	ALCDVGTAISCSR	ALC(UniMod:4)DVGTAISC(UniMod:4)SR	2	ALC(UniMod:4)DVGTAISC(UniMod:4)SR2	4326.21	9769.58	10862.8
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	ALCEVGCNVNIK	ALC(UniMod:4)EVGC(UniMod:4)NVNIK	2	ALC(UniMod:4)EVGC(UniMod:4)NVNIK2	6852.62	7956.61	8170.07
Q63054	Q63054	ICA69_RAT	Ica1	Islet cell autoantigen 1	1	ALCFSSQQR	ALC(UniMod:4)FSSQQR	2	ALC(UniMod:4)FSSQQR2	5810.33	8411.93	8241.13
F1LQ27	F1LQ27	F1LQ27_RAT	Fam98c	Family with sequence similarity 98, member C	1	ALCGGDCATMLR	ALC(UniMod:4)GGDC(UniMod:4)ATMLR	2	ALC(UniMod:4)GGDC(UniMod:4)ATMLR2		4199.46	3740.3
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	ALCLDLLELNTTNEVFK	ALC(UniMod:4)LDLLELNTTNEVFK	3	ALC(UniMod:4)LDLLELNTTNEVFK3	11914.6	15082.9	6564.9
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	ALCLFVPR	ALC(UniMod:4)LFVPR	2	ALC(UniMod:4)LFVPR2	153998	125970	142528
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	ALCLLLGPDFFTDVITIETADHAR	ALC(UniMod:4)LLLGPDFFTDVITIETADHAR	3	ALC(UniMod:4)LLLGPDFFTDVITIETADHAR3		8978.92	12548.2
Q5XHY7	Q5XHY7	STAM2_RAT	Stam2	Signal transducing adapter molecule 2	1	ALCPPAESQLSNK	ALC(UniMod:4)PPAESQLSNK	2	ALC(UniMod:4)PPAESQLSNK2	31246.9	24990.6	21132
G3V6G7	G3V6G7	G3V6G7_RAT	Pnpt1	polyribonucleotide nucleotidyltransferase	1	ALCPVIPK	ALC(UniMod:4)PVIPK	2	ALC(UniMod:4)PVIPK2	7024.6	5256.32	6373.52
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	ALCQITDSTMLQAVER	ALC(UniMod:4)QITDSTMLQAVER	2	ALC(UniMod:4)QITDSTMLQAVER2	52680.6	54209	55458.8
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	ALCQITDSTMLQAVER	ALC(UniMod:4)QITDSTMLQAVER	3	ALC(UniMod:4)QITDSTMLQAVER3	53543.5	39867	47599.4
P08661	P08661;Q7TMC0	MBL2_RAT	Mbl2	Mannose-binding protein C	0	ALCSELQGTVATPR	ALC(UniMod:4)SELQGTVATPR	2	ALC(UniMod:4)SELQGTVATPR2	42993.1	26183.7	32358.4
P19999	P19999	MBL1_RAT	Mbl1	Mannose-binding protein A	1	ALCSELR	ALC(UniMod:4)SELR	2	ALC(UniMod:4)SELR2	321009	315030	309642
P14841	P14841	CYTC_RAT	Cst3	Cystatin-C	1	ALCSFQIYSVPWK	ALC(UniMod:4)SFQIYSVPWK	2	ALC(UniMod:4)SFQIYSVPWK2	33108.7	34637	
E9PT91	E9PT91	E9PT91_RAT	Alg8	Alpha-1,3-glucosyltransferase	1	ALCVTGLELK	ALC(UniMod:4)VTGLELK	2	ALC(UniMod:4)VTGLELK2	10384.7	6523.66	12872
P0C5W1	P0C5W1	MAP1S_RAT	Map1s	Microtubule-associated protein 1S	1	ALCYVISGQGQR	ALC(UniMod:4)YVISGQGQR	2	ALC(UniMod:4)YVISGQGQR2	4489.76		7653.99
Q9R1B1	Q9R1B1;F1LTU8	T10B_RAT	Timm10b	Mitochondrial import inner membrane translocase subunit Tim10 B	0	ALDAEEEACLHSCAGK	ALDAEEEAC(UniMod:4)LHSC(UniMod:4)AGK	3	ALDAEEEAC(UniMod:4)LHSC(UniMod:4)AGK3	37248.8	45891.9	
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	ALDCELAEAQLHTTAIDK	ALDC(UniMod:4)ELAEAQLHTTAIDK	3	ALDC(UniMod:4)ELAEAQLHTTAIDK3	3469.38	5688.95	1072.6
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	ALDCELAEAQLHTTAIDKEGR	ALDC(UniMod:4)ELAEAQLHTTAIDKEGR	4	ALDC(UniMod:4)ELAEAQLHTTAIDKEGR4	7504.22	6932.47	6583.16
A0A0G2JTX2	A0A0G2JTX2	A0A0G2JTX2_RAT	Praf2	PRA1 family protein	1	ALDDFVLGSAR	ALDDFVLGSAR	2	ALDDFVLGSAR2	23177.5	34041.2	27948
Q5XIP1	Q5XIP1	PELO_RAT	Pelo	Protein pelota homolog	1	ALDDFYK	ALDDFYK	2	ALDDFYK2	66335.5	70994.1	64090.7
A0A8I5ZKS4	A0A8I5ZKS4	A0A8I5ZKS4_RAT	Hycc1	Family with sequence similarity 126, member A	1	ALDDIIYR	ALDDIIYR	2	ALDDIIYR2	20918	14343.3	20240.6
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	ALDDILNLK	ALDDILNLK	2	ALDDILNLK2	25188	19227.2	24533.7
Q5U1X1	Q5U1X1	ORN_RAT	Rexo2	Oligoribonuclease, mitochondrial	1	ALDDISESIK	ALDDISESIK	2	ALDDISESIK2	148679	104996	142499
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	ALDDKNCWEK	ALDDKNC(UniMod:4)WEK	2	ALDDKNC(UniMod:4)WEK2	7842.05	9148.44	3129.49
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	ALDDKNCWEK	ALDDKNC(UniMod:4)WEK	3	ALDDKNC(UniMod:4)WEK3	174261	198124	160414
Q6IN36	Q6IN36	WIPF1_RAT	Wipf1	WAS/WASL-interacting protein family member 1	1	ALDDKPPPPPPPVGNRPSMHR	ALDDKPPPPPPPVGNRPSMHR	4	ALDDKPPPPPPPVGNRPSMHR4	104757	80276	81330.3
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	ALDEATK	ALDEATK	1	ALDEATK1		6137.21	10714.1
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	ALDEFTIIQDPQPQYQFR	ALDEFTIIQDPQPQYQFR	3	ALDEFTIIQDPQPQYQFR3	1.46348e+06	1.11147e+06	991138
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	ALDEGDIALLK	ALDEGDIALLK	2	ALDEGDIALLK2	277026	266721	286883
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	ALDEGLTAGHPQGTAVPEKPSR	ALDEGLTAGHPQGTAVPEKPSR	3	ALDEGLTAGHPQGTAVPEKPSR3	34681.7	35284.8	28839.4
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	ALDEGLTAGHPQGTAVPEKPSR	ALDEGLTAGHPQGTAVPEKPSR	4	ALDEGLTAGHPQGTAVPEKPSR4	212415	222206	219367
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	ALDELMDGDIIVFQK	ALDELMDGDIIVFQK	2	ALDELMDGDIIVFQK2	14374.7	15107.5	15471.9
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	ALDESHNQSLK	ALDESHNQSLK	2	ALDESHNQSLK2	3923.46	2660.06	3048.37
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	ALDESHNQSLK	ALDESHNQSLK	3	ALDESHNQSLK3	78552.2	109338	104516
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	ALDETLENQKPTLHK	ALDETLENQKPTLHK	3	ALDETLENQKPTLHK3	17547	25740.3	8448.32
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	ALDETLENQKPTLHK	ALDETLENQKPTLHK	4	ALDETLENQKPTLHK4	79616	83873.3	75877.5
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	ALDEYYDK	ALDEYYDK	2	ALDEYYDK2	55456	41069.2	44577.2
P14841	P14841	CYTC_RAT	Cst3	Cystatin-C	1	ALDFAVSEYNK	ALDFAVSEYNK	2	ALDFAVSEYNK2	46453.5	50811	53223.4
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	ALDFHAETGFIYFADTTSYLIGR	ALDFHAETGFIYFADTTSYLIGR	3	ALDFHAETGFIYFADTTSYLIGR3	8737.02	11696.6	22528
P20909	P20909	COBA1_RAT	Col11a1	Collagen alpha-1(XI) chain	1	ALDFHNSPVGISK	ALDFHNSPVGISK	2	ALDFHNSPVGISK2	2795.04	3681.37	7386.84
P20909	P20909	COBA1_RAT	Col11a1	Collagen alpha-1(XI) chain	1	ALDFHNSPVGISK	ALDFHNSPVGISK	3	ALDFHNSPVGISK3	139364	181953	147700
Q9Z1P2	Q9QXQ0;Q8R4I6;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	ALDFIASK	ALDFIASK	1	ALDFIASK1	73926.7	69117.6	62314.2
Q9Z1P2	Q9QXQ0;Q8R4I6;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	ALDFIASK	ALDFIASK	2	ALDFIASK2	7.98291e+06	9.1023e+06	9.25808e+06
A0A0G2JTX7	A0A0G2JTX7	A0A0G2JTX7_RAT	Col6a5	Collagen type VI alpha 5 chain	1	ALDFILPIIK	ALDFILPIIK	2	ALDFILPIIK2	2813.17	4386.66	4642.87
Q5M824	Q5M824	SHC1_RAT	Shc1	SHC-transforming protein 1	1	ALDFNTR	ALDFNTR	2	ALDFNTR2	13633.2	10864.3	11475.7
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ALDGAFTEENR	ALDGAFTEENR	2	ALDGAFTEENR2	3.23e+06	3.28543e+06	3.26394e+06
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	ALDGLWNR	ALDGLWNR	2	ALDGLWNR2	22936.5	30497.6	28173.2
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	ALDHAVEALK	ALDHAVEALK	2	ALDHAVEALK2	6927.28	7267.37	7944.45
P10760	P10760	SAHH_RAT	Ahcy	Adenosylhomocysteinase	1	ALDIAENEMPGLMR	ALDIAENEMPGLMR	2	ALDIAENEMPGLMR2	12392.6	10055.1	12245.6
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	ALDIDLDKPLADSEK	ALDIDLDKPLADSEK	3	ALDIDLDKPLADSEK3	77842.3	70571	83486.1
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	ALDIDLDKPLADSEKLPVQK	ALDIDLDKPLADSEKLPVQK	3	ALDIDLDKPLADSEKLPVQK3	95103.3	81165.1	93924.3
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	ALDIDLDKPLADSEKLPVQK	ALDIDLDKPLADSEKLPVQK	4	ALDIDLDKPLADSEKLPVQK4	83091.6	92636.3	90884.1
Q4V8A2	Q4V8A2	CDC27_RAT	Cdc27	Cell division cycle protein 27 homolog	1	ALDINPQSSVLLCHIGVVQHALK	ALDINPQSSVLLC(UniMod:4)HIGVVQHALK	4	ALDINPQSSVLLC(UniMod:4)HIGVVQHALK4	7548.38		2416.28
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	ALDISASDDEMARPK	ALDISASDDEMARPK	2	ALDISASDDEMARPK2	8764.71	5142.92	4978.9
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	ALDISASDDEMARPK	ALDISASDDEMARPK	3	ALDISASDDEMARPK3	104564	125334	144771
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	ALDLDSSCK	ALDLDSSC(UniMod:4)K	2	ALDLDSSC(UniMod:4)K2	86298.6	82900.6	91548.7
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	ALDLFSDNAPPPELLEIINEDIAK	ALDLFSDNAPPPELLEIINEDIAK	3	ALDLFSDNAPPPELLEIINEDIAK3		42274.2	34917.4
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	ALDLFSDNAPPPELLEIINEDIAKK	ALDLFSDNAPPPELLEIINEDIAKK	3	ALDLFSDNAPPPELLEIINEDIAKK3	33798.8	39947.4	46635.1
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	ALDLFSDNAPPPELLEIINEDIAKK	ALDLFSDNAPPPELLEIINEDIAKK	4	ALDLFSDNAPPPELLEIINEDIAKK4	18581.3	26747.8	13199.4
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	ALDLLDK	ALDLLDK	2	ALDLLDK2	342914	379622	301083
P21708	P21708	MK03_RAT	Mapk3	Mitogen-activated protein kinase 3	1	ALDLLDR	ALDLLDR	2	ALDLLDR2	35905.6	32738	27342.4
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	ALDLLYGMVSK	ALDLLYGMVSK	2	ALDLLYGMVSK2	264083	256909	236654
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	ALDLLYGMVSKK	ALDLLYGMVSKK	3	ALDLLYGMVSKK3	2721.49	6775.12	4085.21
B2RYS2	F7FFF0;B2RYS2	B2RYS2_RAT	Uqcrb	Cytochrome b-c1 complex subunit 7	0	ALDLSMR	ALDLSMR	2	ALDLSMR2	404883	342074	386389
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	ALDLVAAK	ALDLVAAK	2	ALDLVAAK2	163236	252754	194299
D3Z916	D3Z916	D3Z916_RAT	Mindy3	Ubiquitin carboxyl-terminal hydrolase MINDY	1	ALDLVSDPEYINLMK	ALDLVSDPEYINLMK	2	ALDLVSDPEYINLMK2	15510.3	12805.6	12999.3
Q9JJH5	Q9JJH5	F262_RAT	Pfkfb2	6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2	1	ALDMQEGADQPK	ALDMQEGADQPK	2	ALDMQEGADQPK2	1800.38	4354.59	
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	ALDPAFK	ALDPAFK	2	ALDPAFK2	186055	193583	192100
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	ALDPDSGANSR	ALDPDSGANSR	2	ALDPDSGANSR2	24579.6	32290.6	20418.5
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	ALDPLLYEK	ALDPLLYEK	2	ALDPLLYEK2	13090.6	11626.4	6517.52
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	ALDPMMER	ALDPMMER	2	ALDPMMER2	216152	199666	159468
Q5XIS8	Q5XIS8	MID51_RAT	Mief1	Mitochondrial dynamics protein MID51	1	ALDQADSGCR	ALDQADSGC(UniMod:4)R	2	ALDQADSGC(UniMod:4)R2	4644.93	4974.36	
P38062	P38062	MAP2_RAT	Metap2	Methionine aminopeptidase 2	1	ALDQASEEIWNDFR	ALDQASEEIWNDFR	2	ALDQASEEIWNDFR2	11657.3	13418	11001.4
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	ALDQYLMEFNACR	ALDQYLMEFNAC(UniMod:4)R	2	ALDQYLMEFNAC(UniMod:4)R2	125006	134262	140033
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	ALDQYLMEFNACR	ALDQYLMEFNAC(UniMod:4)R	3	ALDQYLMEFNAC(UniMod:4)R3	16414.6	16345.9	20686.8
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	ALDSDMQTLVYENYNK	ALDSDMQTLVYENYNK	2	ALDSDMQTLVYENYNK2	3421.33	6127.16	6226.66
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	ALDSDMQTLVYENYNK	ALDSDMQTLVYENYNK	3	ALDSDMQTLVYENYNK3	3411.88	4110.36	12380
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	ALDSILR	ALDSILR	2	ALDSILR2	73351.3	68665.8	59748.7
Q9EPH8	D4A233;B5DF80;Q9EPH8;G3V9N0	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	0	ALDTMNFDVIK	ALDTMNFDVIK	2	ALDTMNFDVIK2	82470.5	73738	68776.9
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	ALDTNYCFSSTEK	ALDTNYC(UniMod:4)FSSTEK	2	ALDTNYC(UniMod:4)FSSTEK2	81657.1	87383.4	75232.4
D3ZQQ1	D3ZQQ1	D3ZQQ1_RAT	Aftph	Aftiphilin	1	ALDTPLCGR	ALDTPLC(UniMod:4)GR	2	ALDTPLC(UniMod:4)GR2	17842.1	19049	14528.5
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	ALDTPTLQGLSFTAR	ALDTPTLQGLSFTAR	2	ALDTPTLQGLSFTAR2	34073.5	35430.2	38627
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	ALDTPTLQGLSFTAR	ALDTPTLQGLSFTAR	3	ALDTPTLQGLSFTAR3	3594.23	2104.01	4193.91
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	ALDTPTLQGLSFTARPGELLAVVGPVGAGK	ALDTPTLQGLSFTARPGELLAVVGPVGAGK	3	ALDTPTLQGLSFTARPGELLAVVGPVGAGK3	10701	16092.2	20222.7
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	ALDTVLFGPPLLTR	ALDTVLFGPPLLTR	2	ALDTVLFGPPLLTR2	138732	140970	134903
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	ALDTVLFGPPLLTR	ALDTVLFGPPLLTR	3	ALDTVLFGPPLLTR3	59053.5	56600.5	74548.4
P22062	P22062	PIMT_RAT	Pcmt1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase	1	ALDVGSGSGILTACFAR	ALDVGSGSGILTAC(UniMod:4)FAR	2	ALDVGSGSGILTAC(UniMod:4)FAR2	29848.5	14214.3	19506.3
Q9R1R4	Q9R1R4	TDRD7_RAT	Tdrd7	Tudor domain-containing protein 7	1	ALDVQFLDSGNSTSVK	ALDVQFLDSGNSTSVK	2	ALDVQFLDSGNSTSVK2	2687.97	6236.57	2526
O88277	O88277	FAT2_RAT	Fat2	Protocadherin Fat 2	1	ALDWEQTPSYSLR	ALDWEQTPSYSLR	2	ALDWEQTPSYSLR2	2778.78	3550.55	2791.56
D3ZSC2	D3ZSC2	D3ZSC2_RAT	Pdcd2l	Programmed cell death 2-like	1	ALDWTDK	ALDWTDK	2	ALDWTDK2	33901.4	40116	42043.2
F7FH41	F7FH41	F7FH41_RAT	Csnk2a2	Casein kinase 2 alpha 2	1	ALDYCHSK	ALDYC(UniMod:4)HSK	2	ALDYC(UniMod:4)HSK2		4819.44	
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	ALDYCHSMGIMHR	ALDYC(UniMod:4)HSMGIMHR	3	ALDYC(UniMod:4)HSMGIMHR3	21095.5	29862.6	19604.5
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	ALDYCHSMGIMHR	ALDYC(UniMod:4)HSMGIMHR	4	ALDYC(UniMod:4)HSMGIMHR4	8399.22	7631.58	6544.8
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	ALDYELSSK	ALDYELSSK	2	ALDYELSSK2	19068.3	19267.7	16673.5
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	ALDYEQFQQHK	ALDYEQFQQHK	2	ALDYEQFQQHK2	8321.59	7324.31	6582.25
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	ALDYEQFQQHK	ALDYEQFQQHK	3	ALDYEQFQQHK3	89571.5	77087.4	84204.7
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ALDYYMLR	ALDYYMLR	2	ALDYYMLR2	2.41695e+06	2.53222e+06	2.82757e+06
A0A0U1RRU5	A0A0U1RRU5	A0A0U1RRU5_RAT	Tab1	TGF-beta activated kinase 1/MAP3K7 binding protein 1	1	ALEAAHGPGQANQEVAAMIDTEFAK	ALEAAHGPGQANQEVAAMIDTEFAK	3	ALEAAHGPGQANQEVAAMIDTEFAK3	16603.7	11162.1	18358.1
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	ALEAAQQEK	ALEAAQQEK	2	ALEAAQQEK2	22035.9	17475.6	21250.2
P51635	P51635	AK1A1_RAT	Akr1a1	Aldo-keto reductase family 1 member A1	1	ALEALVAK	ALEALVAK	2	ALEALVAK2	42876.7	49047.1	
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ALEATTEHIR	ALEATTEHIR	2	ALEATTEHIR2	490076	381586	399695
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ALEATTEHIR	ALEATTEHIR	3	ALEATTEHIR3	2.20377e+06	1.83702e+06	2.39735e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ALEATTEHIRQELAVFCSPEPPAK	ALEATTEHIRQELAVFC(UniMod:4)SPEPPAK	3	ALEATTEHIRQELAVFC(UniMod:4)SPEPPAK3	29910.4	42513.8	42164
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ALEATTEHIRQELAVFCSPEPPAK	ALEATTEHIRQELAVFC(UniMod:4)SPEPPAK	4	ALEATTEHIRQELAVFC(UniMod:4)SPEPPAK4	46969.3	79988	76093.4
A0A096MJ11	A0A096MJ11	A0A096MJ11_RAT	Gsdmd	Gasdermin D	1	ALEATVLSK	ALEATVLSK	2	ALEATVLSK2	39645.8	46944.9	39895
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	ALEDFADNIK	ALEDFADNIK	2	ALEDFADNIK2	20434.9	22340.5	26037.7
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	ALEDFTGPDCR	ALEDFTGPDC(UniMod:4)R	2	ALEDFTGPDC(UniMod:4)R2	35471	34961.6	31290.5
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	ALEDLAQELEK	ALEDLAQELEK	2	ALEDLAQELEK2	21990.1	17086.8	12664.2
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	ALEDLAQELEKENYHDQK	ALEDLAQELEKENYHDQK	3	ALEDLAQELEKENYHDQK3	40679.2	52204.1	33559.4
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	ALEDLAQELEKENYHDQK	ALEDLAQELEKENYHDQK	4	ALEDLAQELEKENYHDQK4	35896	45209.3	42858.5
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	ALEDLGR	ALEDLGR	2	ALEDLGR2	53716.5	51103.4	71452.3
A0A8I6AAA9	A0A8I6AAA9	A0A8I6AAA9_RAT	Lrch1	Leucine rich repeats and calponin homology domain containing 1	1	ALEEAANSGGLNLSAR	ALEEAANSGGLNLSAR	2	ALEEAANSGGLNLSAR2	23904.4	13582.5	9434.66
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	ALEEAAVTGVLSLSGR	ALEEAAVTGVLSLSGR	2	ALEEAAVTGVLSLSGR2	10468.8	10788.5	6916.68
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	ALEEAAVTGVLSLSGR	ALEEAAVTGVLSLSGR	3	ALEEAAVTGVLSLSGR3	15154	10692.3	12303.1
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	ALEEAGFK	ALEEAGFK	1	ALEEAGFK1	11299.2	17841.7	7864.67
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	ALEEAGFK	ALEEAGFK	2	ALEEAGFK2	2.12266e+06	2.24749e+06	2.27688e+06
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	ALEEAGFKLPCQLHQVIVAR	ALEEAGFKLPC(UniMod:4)QLHQVIVAR	3	ALEEAGFKLPC(UniMod:4)QLHQVIVAR3	13835.3	13872.9	18126.4
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	ALEEAGFKLPCQLHQVIVAR	ALEEAGFKLPC(UniMod:4)QLHQVIVAR	4	ALEEAGFKLPC(UniMod:4)QLHQVIVAR4	229118	309104	290952
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	ALEEAMEQK	ALEEAMEQK	2	ALEEAMEQK2	1.79236e+07	2.17652e+07	1.95209e+07
Q6IFU8	Q6IFV3;Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	0	ALEEANTELEVK	ALEEANTELEVK	2	ALEEANTELEVK2	20474.8	7705.49	10786.8
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	ALEEAVATGTLNLSNR	ALEEAVATGTLNLSNR	2	ALEEAVATGTLNLSNR2	9643.53	9016.9	15184.3
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	ALEEAVATGTLNLSNRR	ALEEAVATGTLNLSNRR	3	ALEEAVATGTLNLSNRR3	18705.4	31584	25311.1
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	ALEEDLNQK	ALEEDLNQK	2	ALEEDLNQK2	16314.8	20787.5	10223.5
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	ALEEDLNQKK	ALEEDLNQKK	3	ALEEDLNQKK3	21124.2	12990	19584.9
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ALEEEIENHAADVQQAVK	ALEEEIENHAADVQQAVK	3	ALEEEIENHAADVQQAVK3	59031	85354.4	82427.1
D4A709	D4A709	D4A709_RAT	Tubgcp6	Tubulin, gamma complex associated protein 6	1	ALEEELERK	ALEEELERK	2	ALEEELERK2	81748.7	47668.4	63932.2
P29315	P29315	RINI_RAT	Rnh1	Ribonuclease inhibitor	1	ALEEERPSLR	ALEEERPSLR	3	ALEEERPSLR3	208232	183654	194463
Q5U2N3	Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	1	ALEEETAR	ALEEETAR	2	ALEEETAR2	18079.8	21813.2	12087.6
Q3ZAU6	Q3ZAU6	Q3ZAU6_RAT	Rnf14	RBR-type E3 ubiquitin transferase	1	ALEEMESK	ALEEMESK	2	ALEEMESK2	34858.2	51259.6	44439.9
P21818	P21818	STMN2_RAT	Stmn2	Stathmin-2	1	ALEENNNFSK	ALEENNNFSK	2	ALEENNNFSK2	25272.3	28021.2	
F7FHP0	F7FHP0	F7FHP0_RAT	Angptl3	Angiopoietin-like 3	1	ALEEQLTSLVQNPPGAR	ALEEQLTSLVQNPPGAR	2	ALEEQLTSLVQNPPGAR2	53527.3	50921.4	52385.8
F7FHP0	F7FHP0	F7FHP0_RAT	Angptl3	Angiopoietin-like 3	1	ALEEQLTSLVQNPPGAR	ALEEQLTSLVQNPPGAR	3	ALEEQLTSLVQNPPGAR3	29046.4	49366.1	40869.7
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	ALEEVQLK	ALEEVQLK	2	ALEEVQLK2	163372	180665	162500
F1LVL2	F1LVL2	F1LVL2_RAT	Icoslg	Inducible T-cell co-stimulator ligand	1	ALEEVVR	ALEEVVR	2	ALEEVVR2	1.25728e+06	1.19092e+06	1.28153e+06
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	ALEEYQQQLENELK	ALEEYQQQLENELK	2	ALEEYQQQLENELK2	65497.1	57775.3	67849.9
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	ALEEYQQQLENELK	ALEEYQQQLENELK	3	ALEEYQQQLENELK3	18393.8	21798	23178.6
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	ALEFVAR	ALEFVAR	2	ALEFVAR2	26165.4	31516.4	30793
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	ALEFVHTESQK	ALEFVHTESQK	2	ALEFVHTESQK2	4085.87	1361.04	2058
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	ALEFVHTESQK	ALEFVHTESQK	3	ALEFVHTESQK3	21409.6	30377.2	18958.9
A0A8I6A1H4	A0A8I6A1H4	A0A8I6A1H4_RAT	Tmppe	Transmembrane protein with metallophosphoesterase domain	1	ALEGCSPEHATILLAHQPLAAK	ALEGC(UniMod:4)SPEHATILLAHQPLAAK	3	ALEGC(UniMod:4)SPEHATILLAHQPLAAK3	2765.65	2584.48	
A0A8I6A1H4	A0A8I6A1H4	A0A8I6A1H4_RAT	Tmppe	Transmembrane protein with metallophosphoesterase domain	1	ALEGCSPEHATILLAHQPLAAK	ALEGC(UniMod:4)SPEHATILLAHQPLAAK	4	ALEGC(UniMod:4)SPEHATILLAHQPLAAK4	12976	21660.6	14360.9
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	ALEGIISNFGQTPCQLLK	ALEGIISNFGQTPC(UniMod:4)QLLK	3	ALEGIISNFGQTPC(UniMod:4)QLLK3	17861.8	20814.8	15383.7
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	ALEGINNGITQAGR	ALEGINNGITQAGR	2	ALEGINNGITQAGR2	35444.9	31759.9	40002
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	ALEGSALYTGSALDFVR	ALEGSALYTGSALDFVR	2	ALEGSALYTGSALDFVR2	14479.1	11505.9	9060.6
Q9QYH7	Q9QYH7	GHRL_RAT	Ghrl	Appetite-regulating hormone	1	ALEGWLHPEDR	ALEGWLHPEDR	3	ALEGWLHPEDR3	11305.6	5164.95	11095.4
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	ALEHAFK	ALEHAFK	2	ALEHAFK2	60403.2	64362.4	63938.3
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	ALEHFPMLQK	ALEHFPMLQK	3	ALEHFPMLQK3	134570	153078	140023
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	ALEHFTDLYDIK	ALEHFTDLYDIK	2	ALEHFTDLYDIK2	42929.3	36073.2	41417.1
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	ALEHFTDLYDIK	ALEHFTDLYDIK	3	ALEHFTDLYDIK3	416445	401733	452135
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	ALEHFTDLYDIKR	ALEHFTDLYDIKR	2	ALEHFTDLYDIKR2	7864.3	10179.3	8186.14
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	ALEHFTDLYDIKR	ALEHFTDLYDIKR	3	ALEHFTDLYDIKR3	152610	141690	172765
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	ALEHFTDLYDIKR	ALEHFTDLYDIKR	4	ALEHFTDLYDIKR4	258246	282456	312018
Q5U2N0	Q5U2N0;F7F0L0	PYRG2_RAT	Ctps2	CTP synthase 2	0	ALEHSALAINHK	ALEHSALAINHK	2	ALEHSALAINHK2	5658.22	5713.8	4837.4
Q5U2N0	Q5U2N0;F7F0L0	PYRG2_RAT	Ctps2	CTP synthase 2	0	ALEHSALAINHK	ALEHSALAINHK	3	ALEHSALAINHK3	131020	146710	139081
D3ZWS0	D3ZWS0	D3ZWS0_RAT	Scrib	Scribble planar cell polarity protein	1	ALEIADFSGNPLSR	ALEIADFSGNPLSR	2	ALEIADFSGNPLSR2	4213.84	6486.71	1386.06
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	ALEIAEGK	ALEIAEGK	2	ALEIAEGK2	23270.8	29658.2	22407
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	ALEICQQR	ALEIC(UniMod:4)QQR	2	ALEIC(UniMod:4)QQR2	13729.6	10535.6	7817.18
Q5FWU3	Q5FWU3	ATG9A_RAT	Atg9a	Autophagy-related protein 9A	1	ALEIIDFFR	ALEIIDFFR	2	ALEIIDFFR2	2418.33	4702.76	3852.69
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	ALEIIPR	ALEIIPR	2	ALEIIPR2	459815	505793	518480
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	ALEIYQTK	ALEIYQTK	1	ALEIYQTK1	3125.26	755.4	2391.26
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	ALEIYQTK	ALEIYQTK	2	ALEIYQTK2	185927	186929	195115
Q06145	Q06145	GIP_RAT	Gip	Gastric inhibitory polypeptide	1	ALELAGQSQR	ALELAGQSQR	2	ALELAGQSQR2	7802.5	7837.01	5569.89
Q04631	Q04631	FNTA_RAT	Fnta	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha	1	ALELCEILAK	ALELC(UniMod:4)EILAK	2	ALELC(UniMod:4)EILAK2	2217.76	5023.75	5913.55
D4A4T0	D4A4T0	D4A4T0_RAT	Stub1	STIP1 homology and U-box containing protein 1	1	ALELDGQSVK	ALELDGQSVK	2	ALELDGQSVK2	21299.9	29649.4	20170.4
O70593	O70593	SGTA_RAT	Sgta	Small glutamine-rich tetratricopeptide repeat-containing protein alpha	1	ALELDPDNDTYK	ALELDPDNDTYK	2	ALELDPDNDTYK2	356724	322727	315631
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	ALELDSNLYR	ALELDSNLYR	2	ALELDSNLYR2	98833.9	113271	1.22502e+07
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	ALELDSNLYR	ALELDSNLYR	3	ALELDSNLYR3	17591	25882.4	24447.9
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	ALELDSNNEK	ALELDSNNEK	2	ALELDSNNEK2	35857.5	22376.3	27887
O35763	O35763;Q5PQK5	MOES_RAT	Msn	Moesin	0	ALELEQER	ALELEQER	2	ALELEQER2	226853	178202	240003
O35763	O35763	MOES_RAT	Msn	Moesin	1	ALELEQERK	ALELEQERK	2	ALELEQERK2	9244.76	5844.77	6462.66
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	ALELGDSTPPFLFHPNVQMK	ALELGDSTPPFLFHPNVQMK	3	ALELGDSTPPFLFHPNVQMK3	1.27035e+06	1.37491e+06	1.49849e+06
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	ALELGDSTPPFLFHPNVQMK	ALELGDSTPPFLFHPNVQMK	4	ALELGDSTPPFLFHPNVQMK4	6156.15	15746	
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	ALELGTVMTVFSAR	ALELGTVMTVFSAR	2	ALELGTVMTVFSAR2	13711.9	9337.32	
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	ALELGTVMTVFSAR	ALELGTVMTVFSAR	3	ALELGTVMTVFSAR3	11006.8	6091.52	8863.44
D3ZGA5	D3ZGA5	D3ZGA5_RAT	Rilp	Rab interacting lysosomal protein	1	ALELLEK	ALELLEK	2	ALELLEK2	71212.4	71877.7	
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	ALELLGER	ALELLGER	2	ALELLGER2	20652	20604.6	18271.3
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	ALELLPK	ALELLPK	2	ALELLPK2	20235.7	18099.3	13842.5
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	ALELNSR	ALELNSR	2	ALELNSR2	58811.6	69226.2	75789.5
Q2M2R8	Q2M2R8	PEX5_RAT	Pex5	Peroxisomal targeting signal 1 receptor	1	ALELQPGYIR	ALELQPGYIR	2	ALELQPGYIR2	8116.73	7982.31	10062.5
P13383	P13383	NUCL_RAT	Ncl	Nucleolin	1	ALELTGLK	ALELTGLK	2	ALELTGLK2	11129.2	7505.74	5662.03
Q9JJ79	Q9JJ79	DYHC2_RAT	Dync2h1	Cytoplasmic dynein 2 heavy chain 1	1	ALELYEQLR	ALELYEQLR	2	ALELYEQLR2	8776.24	12589.9	9551.24
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	ALEMMAGQTTDAVPSK	ALEMMAGQTTDAVPSK	2	ALEMMAGQTTDAVPSK2	79723.2	80521.8	70747
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	ALEMMAGQTTDAVPSK	ALEMMAGQTTDAVPSK	3	ALEMMAGQTTDAVPSK3		7954.79	8055.82
D3ZFJ3	D3ZFJ3	3BP1_RAT	Sh3bp1	SH3 domain-binding protein 1	1	ALEMSCAIQNQLAR	ALEMSC(UniMod:4)AIQNQLAR	2	ALEMSC(UniMod:4)AIQNQLAR2	10365.3	5809.79	11614.3
D3ZFJ3	D3ZFJ3	3BP1_RAT	Sh3bp1	SH3 domain-binding protein 1	1	ALEMSCAIQNQLAR	ALEMSC(UniMod:4)AIQNQLAR	3	ALEMSC(UniMod:4)AIQNQLAR3	7507.22	18959.2	
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	ALENDADCSHLLPMNPNDGSLFR	ALENDADC(UniMod:4)SHLLPMNPNDGSLFR	3	ALENDADC(UniMod:4)SHLLPMNPNDGSLFR3	30112.3	31273.6	23644.1
Q63598	Q63598;Q5XI38	PLST_RAT	Pls3	Plastin-3	0	ALENDPDCR	ALENDPDC(UniMod:4)R	2	ALENDPDC(UniMod:4)R2	20215	20092.7	14562.1
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	ALENNPK	ALENNPK	2	ALENNPK2			205026
O88902	O88902	PTN23_RAT	Ptpn23	Tyrosine-protein phosphatase non-receptor type 23 (Fragment)	1	ALENPDTASLLGR	ALENPDTASLLGR	2	ALENPDTASLLGR2	12965.7	11561.6	5745.11
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	ALENQCQQQIQLIEVLSAEK	ALENQC(UniMod:4)QQQIQLIEVLSAEK	3	ALENQC(UniMod:4)QQQIQLIEVLSAEK3	68615.9	61937.1	65238.8
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	ALENSNYGVR	ALENSNYGVR	2	ALENSNYGVR2	8156.22	11338.2	14187.2
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	ALENTAIK	ALENTAIK	2	ALENTAIK2	104863	105480	101255
P97586	P97586	CGRE1_RAT	Cgref1	Cell growth regulator with EF hand domain protein 1	1	ALEPEQEAGHHIETK	ALEPEQEAGHHIETK	2	ALEPEQEAGHHIETK2	30586.5	25117.8	19826.1
P97586	P97586	CGRE1_RAT	Cgref1	Cell growth regulator with EF hand domain protein 1	1	ALEPEQEAGHHIETK	ALEPEQEAGHHIETK	3	ALEPEQEAGHHIETK3	562919	561982	478107
P97586	P97586	CGRE1_RAT	Cgref1	Cell growth regulator with EF hand domain protein 1	1	ALEPEQEAGHHIETK	ALEPEQEAGHHIETK	4	ALEPEQEAGHHIETK4	490105	534799	445836
D3ZYB4	D3ZYB4	D3ZYB4_RAT	Lpin2	phosphatidate phosphatase	1	ALEPEVAALYFPK	ALEPEVAALYFPK	2	ALEPEVAALYFPK2	9185.66	11956.5	11979.7
P15684	P15684	AMPN_RAT	Anpep	Aminopeptidase N	1	ALEQALEK	ALEQALEK	2	ALEQALEK2	36851.8	36242.5	33911
D4A3T4	D4A3T4	D4A3T4_RAT	Zfyve1	Zinc finger FYVE-type containing 1	1	ALEQLLENNTTR	ALEQLLENNTTR	2	ALEQLLENNTTR2	11495.3	8582.07	12046.8
B0BN85	B0BN85	SGT1_RAT	Sugt1	Protein SGT1 homolog	1	ALEQNPDDAQYYCQR	ALEQNPDDAQYYC(UniMod:4)QR	2	ALEQNPDDAQYYC(UniMod:4)QR2	6801.13	7403.33	1729.97
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	ALEQQVEEMK	ALEQQVEEMK	2	ALEQQVEEMK2	4.40632e+06	4.87657e+06	4.8154e+06
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	ALEQSHSLPLPTPASTSPTK	ALEQSHSLPLPTPASTSPTK	3	ALEQSHSLPLPTPASTSPTK3	8971.16	5761.7	16887.1
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	ALERLEGVEGVAHIIDPK	ALERLEGVEGVAHIIDPK	3	ALERLEGVEGVAHIIDPK3		11871.3	7275.24
Q2PQA9	P56536;Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	0	ALESALK	ALESALK	1	ALESALK1	4064.29	4784.11	4202.86
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	ALESDMAPVLIMATNR	ALESDMAPVLIMATNR	2	ALESDMAPVLIMATNR2	60991.6	52754.8	73299.3
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	ALESDMAPVLIMATNR	ALESDMAPVLIMATNR	3	ALESDMAPVLIMATNR3	31076.2	20937.5	32131.3
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	ALESGDMNTVWK	ALESGDMNTVWK	2	ALESGDMNTVWK2	44051.3	34524.4	24714.1
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	ALESHAAAFK	ALESHAAAFK	2	ALESHAAAFK2	10105.4	8155.34	13507.1
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	ALESLSCPK	ALESLSC(UniMod:4)PK	2	ALESLSC(UniMod:4)PK2	14884.1	12151.1	23922.4
P16617	A0A8I6A6N5;P16617;M0R6Y8	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	0	ALESPERPFLAILGGAK	ALESPERPFLAILGGAK	2	ALESPERPFLAILGGAK2	7753.14	6527.51	6494.8
P16617	A0A8I6A6N5;P16617;M0R6Y8	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	0	ALESPERPFLAILGGAK	ALESPERPFLAILGGAK	3	ALESPERPFLAILGGAK3	416629	327768	387543
P60123	P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	1	ALESSIAPIVIFASNR	ALESSIAPIVIFASNR	2	ALESSIAPIVIFASNR2	40574	34763.5	38452.9
P60123	P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	1	ALESSIAPIVIFASNR	ALESSIAPIVIFASNR	3	ALESSIAPIVIFASNR3	17142.9	24134.2	24701.5
Q9QYU2	Q9QYU2	EFTS_RAT	Tsfm	Elongation factor Ts, mitochondrial	1	ALETCGGDLK	ALETC(UniMod:4)GGDLK	2	ALETC(UniMod:4)GGDLK2	18594.6	16746.7	14781.2
Q62825	Q62825	EXOC3_RAT	Exoc3	Exocyst complex component 3	1	ALETDKK	ALETDKK	1	ALETDKK1			4328.98
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	ALETEGLLLYNGNAR	ALETEGLLLYNGNAR	2	ALETEGLLLYNGNAR2	4408.48	2137.25	6724
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	ALETIGANLQK	ALETIGANLQK	2	ALETIGANLQK2	27733	29497.2	34175
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	ALETMIK	ALETMIK	2	ALETMIK2	28165.5	30004.5	24218.4
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	ALETSPA	ALETSPA	1	ALETSPA1	151907	143001	136240
Q6AZ50	Q6AZ50	ATG3_RAT	Atg3	Ubiquitin-like-conjugating enzyme ATG3	1	ALEVAEYLTPVLK	ALEVAEYLTPVLK	2	ALEVAEYLTPVLK2	133898	173940	166481
Q6AZ50	Q6AZ50	ATG3_RAT	Atg3	Ubiquitin-like-conjugating enzyme ATG3	1	ALEVAEYLTPVLK	ALEVAEYLTPVLK	3	ALEVAEYLTPVLK3	8046.56	10051.8	11135.4
A0A0G2QC02	A0A0G2QC02	A0A0G2QC02_RAT	Skic2	Ski2 like RNA helicase	1	ALEVGCTGR	ALEVGC(UniMod:4)TGR	2	ALEVGC(UniMod:4)TGR2	4779.4	3430.07	9901.02
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	ALEVIKPAHILQEK	ALEVIKPAHILQEK	4	ALEVIKPAHILQEK4	11430.3	18363.6	17372.2
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	ALEVIKPAHILQEKEEQHQLAVTAYIK	ALEVIKPAHILQEKEEQHQLAVTAYIK	4	ALEVIKPAHILQEKEEQHQLAVTAYIK4	7005.72	5892.99	7951.4
Q5RJS3	Q5RJS3	Q5RJS3_RAT	Ciao2a	Cytosolic iron-sulfur assembly component 2A	1	ALEVYDLIR	ALEVYDLIR	2	ALEVYDLIR2	68919.6	67798.3	66125.4
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	ALEWLGADR	ALEWLGADR	2	ALEWLGADR2	11886.3	4250.02	11185.1
P10362	P10362	SCG2_RAT	Scg2	Secretogranin-2	1	ALEYIEK	ALEYIEK	2	ALEYIEK2	10641.4	12216.2	2723.61
Q6IMX7	Q6IMX7	HPBP1_RAT	Hspbp1	Hsp70-binding protein 1	1	ALFAISCLVR	ALFAISC(UniMod:4)LVR	2	ALFAISC(UniMod:4)LVR2	5355.5	6716.32	4452.92
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	ALFALLEVPK	ALFALLEVPK	2	ALFALLEVPK2	14344	11712.1	12257.7
A0A8I5ZLD3	A0A8I5ZLD3	A0A8I5ZLD3_RAT	Abi2	Abl-interactor 2	1	ALFDSYTNLER	ALFDSYTNLER	2	ALFDSYTNLER2	33396.3	39047	50800.4
Q02353	Q02353	NDST1_RAT	Ndst1	Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1	1	ALFDTQNELR	ALFDTQNELR	2	ALFDTQNELR2	13149.2	10885.6	6504.42
Q62696	P31016;Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	0	ALFDYDK	ALFDYDK	2	ALFDYDK2	19162.2	19085.1	18736.3
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	ALFDYDPKEDK	ALFDYDPKEDK	3	ALFDYDPKEDK3	30130.3	23361.2	24228.5
B0BNH1	B0BNH1	B0BNH1_RAT	Gnptg	N-acetylglucosamine-1-phosphate transferase subunit gamma	1	ALFEDAGYLK	ALFEDAGYLK	2	ALFEDAGYLK2	180169	140316	121885
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	ALFEEVPELLTEAEK	ALFEEVPELLTEAEK	2	ALFEEVPELLTEAEK2	33763.4	40714.5	24582.4
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	ALFEEVPELLTEAEK	ALFEEVPELLTEAEK	3	ALFEEVPELLTEAEK3	8556.94	2609.94	7077.56
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	ALFEIALR	ALFEIALR	2	ALFEIALR2	14509.3	10661.6	7794.52
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	ALFEKEVDELSQSFHTTQDGAQLK	ALFEKEVDELSQSFHTTQDGAQLK	4	ALFEKEVDELSQSFHTTQDGAQLK4	16796.9	7641.08	7218.35
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	ALFESSTNNNK	ALFESSTNNNK	2	ALFESSTNNNK2	18523.4	18733.2	16408.6
B0BNG0	B0BNG0	EMC2_RAT	Emc2	ER membrane protein complex subunit 2	1	ALFGLYMSASHIASNPK	ALFGLYMSASHIASNPK	2	ALFGLYMSASHIASNPK2	1349.72		1867.58
B0BNG0	B0BNG0	EMC2_RAT	Emc2	ER membrane protein complex subunit 2	1	ALFGLYMSASHIASNPK	ALFGLYMSASHIASNPK	3	ALFGLYMSASHIASNPK3	44721.6	43021.6	39125.2
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	ALFHMDNAYK	ALFHMDNAYK	2	ALFHMDNAYK2	7465.29	1483.97	8411.52
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	ALFHMDNAYK	ALFHMDNAYK	3	ALFHMDNAYK3	161970	171485	172796
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	ALFIVPR	ALFIVPR	2	ALFIVPR2	39162	48543.8	34583.7
Q5BJX1	Q5BJX1;D3ZH23	RM41_RAT	Mrpl41	Large ribosomal subunit protein mL41	0	ALFLETVAPAIEK	ALFLETVAPAIEK	2	ALFLETVAPAIEK2	4413.41	2315.81	6943.17
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	ALFLHNR	ALFLHNR	2	ALFLHNR2	98460.2	97811.7	126477
F1LP90	A0A0G2K490;A0A8I5ZLV4;F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	0	ALFLIPR	ALFLIPR	2	ALFLIPR2	592015	597781	619431
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	ALFNAQFGSIFR	ALFNAQFGSIFR	2	ALFNAQFGSIFR2	23308.2	30405.7	27080.8
P61621	A0A8I6AA70;P61621	S61A1_RAT	Sec61a1	Protein transport protein Sec61 subunit alpha isoform 1	0	ALFNGAQK	ALFNGAQK	2	ALFNGAQK2	20234.3	11927.7	18862.7
Q7TP54	P02793;A0A8I5ZY31;M0RCS3;M0R597;M0R5T8;Q7TP54;F1M5T1;M0R6L9;A0A8L2QVZ0	RIPR2_RAT	Ripor2	Rho family-interacting cell polarization regulator 2	0	ALFQDVQKPSQDEWGK	ALFQDVQKPSQDEWGK	3	ALFQDVQKPSQDEWGK3	118273	130852	136634
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	ALFQLSR	ALFQLSR	2	ALFQLSR2	41636.2	41197.7	27338
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	ALFQNTER	ALFQNTER	2	ALFQNTER2	30685.5	23480.9	41145.4
B3DMA2	B3DMA2	ACD11_RAT	Acad11	Acyl-CoA dehydrogenase family member 11	1	ALFSVGFPVPK	ALFSVGFPVPK	2	ALFSVGFPVPK2	9436.38	7916.98	10506.5
Q5XIL0	Q5XIL0	RN167_RAT	Rnf167	E3 ubiquitin-protein ligase RNF167	1	ALFVYEK	ALFVYEK	2	ALFVYEK2	8789.68	6597.46	7446.16
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	ALGAEAEAR	ALGAEAEAR	2	ALGAEAEAR2	481297	441853	399602
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	ALGALVDSCAPGLCPDWDSWDASK	ALGALVDSC(UniMod:4)APGLC(UniMod:4)PDWDSWDASK	3	ALGALVDSC(UniMod:4)APGLC(UniMod:4)PDWDSWDASK3	15076.9	11523.3	25101
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	ALGALVDSCAPGLCPDWDSWDASKPVNNAR	ALGALVDSC(UniMod:4)APGLC(UniMod:4)PDWDSWDASKPVNNAR	4	ALGALVDSC(UniMod:4)APGLC(UniMod:4)PDWDSWDASKPVNNAR4	1.01934e+06	839212	1.00026e+06
Q03626	Q6IE52;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	ALGCLEASWETIEQGR	ALGC(UniMod:4)LEASWETIEQGR	2	ALGC(UniMod:4)LEASWETIEQGR2	254550	170959	142992
Q03626	Q6IE52;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	ALGCLEASWETIEQGR	ALGC(UniMod:4)LEASWETIEQGR	3	ALGC(UniMod:4)LEASWETIEQGR3	196549	149553	115283
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	ALGCSTVLQDVSLHSPYETK	ALGC(UniMod:4)STVLQDVSLHSPYETK	3	ALGC(UniMod:4)STVLQDVSLHSPYETK3	17874.8	20846.6	22985.9
P20650	P20650	PPM1A_RAT	Ppm1a	Protein phosphatase 1A	1	ALGDFDYK	ALGDFDYK	2	ALGDFDYK2	32338.3	28551.4	28017.5
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	ALGDLEQEIQR	ALGDLEQEIQR	2	ALGDLEQEIQR2	39582.6	44026.1	41508.5
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ALGDLISATK	ALGDLISATK	2	ALGDLISATK2	3.92684e+06	3.85156e+06	4.05664e+06
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	ALGDQAEACQQQQAAPVDEAGR	ALGDQAEAC(UniMod:4)QQQQAAPVDEAGR	3	ALGDQAEAC(UniMod:4)QQQQAAPVDEAGR3	8193.68	4957.39	8248.52
P15684	P15684	AMPN_RAT	Anpep	Aminopeptidase N	1	ALGDTPAPNIDTTELVER	ALGDTPAPNIDTTELVER	2	ALGDTPAPNIDTTELVER2	6723.92	8675.96	4814.1
P35815	P35815	PPM1B_RAT	Ppm1b	Protein phosphatase 1B	1	ALGDYDYK	ALGDYDYK	2	ALGDYDYK2	89091.3	70555.1	80196.5
Q66H85	Q66H85	ANKZ1_RAT	Ankzf1	tRNA endonuclease ANKZF1	1	ALGEAETILLHAPR	ALGEAETILLHAPR	3	ALGEAETILLHAPR3	7149.45	3957.57	6378.62
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	ALGEYLER	ALGEYLER	2	ALGEYLER2	300947	394672	305710
Q8VHF5	Q8VHF5	CISY_RAT	Cs	Citrate synthase, mitochondrial	1	ALGFPLER	ALGFPLER	2	ALGFPLER2	37897.9		20885.3
Q8VHF5	Q8VHF5	CISY_RAT	Cs	Citrate synthase, mitochondrial	1	ALGFPLERPK	ALGFPLERPK	2	ALGFPLERPK2	104387	106990	94769.8
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	ALGFTDTVTVQVHPQCECQCR	ALGFTDTVTVQVHPQC(UniMod:4)EC(UniMod:4)QC(UniMod:4)R	3	ALGFTDTVTVQVHPQC(UniMod:4)EC(UniMod:4)QC(UniMod:4)R3	49459.8	48354.8	57926.9
Q5XFW6	Q5XFW6	WDR6_RAT	Wdr6	WD repeat-containing protein 6	1	ALGGCIRPNVILR	ALGGC(UniMod:4)IRPNVILR	3	ALGGC(UniMod:4)IRPNVILR3	34145	34505.1	24799.9
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	ALGGEDDLAK	ALGGEDDLAK	2	ALGGEDDLAK2	82645.2	99122	78539.3
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	ALGHGVDLGHIYGDSLER	ALGHGVDLGHIYGDSLER	2	ALGHGVDLGHIYGDSLER2	5492.6	6032.92	4023.92
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	ALGHGVDLGHIYGDSLER	ALGHGVDLGHIYGDSLER	3	ALGHGVDLGHIYGDSLER3	78332.4	94826	66874.9
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	ALGHGVDLGHIYGDSLER	ALGHGVDLGHIYGDSLER	4	ALGHGVDLGHIYGDSLER4	315498	380417	255485
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	ALGHPAMLSK	ALGHPAMLSK	2	ALGHPAMLSK2	21612.5	21625.2	18835.8
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	ALGHQLGR	ALGHQLGR	2	ALGHQLGR2	32077.7	38890.1	20852.9
A0A8I5ZUT2	A0A8I5ZUT2	A0A8I5ZUT2_RAT	Irgq	Immunity-related GTPase Q	1	ALGIEPAAVAR	ALGIEPAAVAR	2	ALGIEPAAVAR2	25307.7	19569	8693.16
Q5U2N3	Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	1	ALGIGVYPVR	ALGIGVYPVR	2	ALGIGVYPVR2	20663.6	22652.6	23024.4
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	ALGITEMFEPSK	ALGITEMFEPSK	2	ALGITEMFEPSK2	291893	286497	273996
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	ALGLADLER	ALGLADLER	2	ALGLADLER2	10245.1	16737.8	8485.27
A0A8I5ZUT2	A0A8I5ZUT2	A0A8I5ZUT2_RAT	Irgq	Immunity-related GTPase Q	1	ALGLAPGVLATR	ALGLAPGVLATR	2	ALGLAPGVLATR2	24523	19291.2	21917.8
A0A8I5ZUE7	A0A8I5ZUE7	A0A8I5ZUE7_RAT	Zc3h7b	Zinc finger CCCH-type containing 7B	1	ALGLDGESIR	ALGLDGESIR	2	ALGLDGESIR2	20428.9	19187.9	16085.3
F7EYK0	F7EYK0	F7EYK0_RAT	Fkbp5	peptidylprolyl isomerase	1	ALGLDSANEK	ALGLDSANEK	2	ALGLDSANEK2	31287.9	25935.7	43649
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	ALGLEESPAEGSK	ALGLEESPAEGSK	2	ALGLEESPAEGSK2	15041.1	6268.22	7794.68
F1LTT7	F1LTT7	F1LTT7_RAT	Dennd4b	DENN domain containing 4B	1	ALGLLSAVER	ALGLLSAVER	2	ALGLLSAVER2	9628.03	22149.6	12686.3
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	ALGLNEVDYK	ALGLNEVDYK	2	ALGLNEVDYK2	67351.2	82910.7	74541.1
P51635	P51635	AK1A1_RAT	Akr1a1	Aldo-keto reductase family 1 member A1	1	ALGLSNFSSR	ALGLSNFSSR	2	ALGLSNFSSR2	75324.4	59719.9	53019.4
Q5XI86	Q5XI86	Q5XI86_RAT	Ptrh2	aminoacyl-tRNA hydrolase	1	ALGLTVSLIQDAGR	ALGLTVSLIQDAGR	2	ALGLTVSLIQDAGR2	29072.4	22803	32575.9
A0A0G2K1D2	A0A0G2K1D2	A0A0G2K1D2_RAT	Rap1gds1	Rap1 GTPase-GDP dissociation stimulator 1	1	ALGNICYDSHEGR	ALGNIC(UniMod:4)YDSHEGR	3	ALGNIC(UniMod:4)YDSHEGR3	13081.7	14341.8	11957
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	ALGNSEEATMLQHR	ALGNSEEATMLQHR	2	ALGNSEEATMLQHR2	10379.6	10561	7992.22
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	ALGNSEEATMLQHR	ALGNSEEATMLQHR	3	ALGNSEEATMLQHR3	74171.4	77411.5	76589.4
Q9QYP1	Q9QYP1	LRP4_RAT	Lrp4	Low-density lipoprotein receptor-related protein 4	1	ALGPEPVLLFANR	ALGPEPVLLFANR	2	ALGPEPVLLFANR2	3346.42	6143.55	3324.59
Q6MG06	Q6MG06	GNL1_RAT	Gnl1	Guanine nucleotide-binding protein-like 1	1	ALGPEQLLR	ALGPEQLLR	2	ALGPEQLLR2	63927		61972.8
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	ALGQAASDSSGPEDMK	ALGQAASDSSGPEDMK	2	ALGQAASDSSGPEDMK2	5564.7	4771.46	3539.98
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	ALGQAASDSSGPEDMKR	ALGQAASDSSGPEDMKR	3	ALGQAASDSSGPEDMKR3	80522	99608.3	104219
M0R915	M0R915;A0A8I6GLQ4	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	0	ALGQCVSR	ALGQC(UniMod:4)VSR	2	ALGQC(UniMod:4)VSR2	70870.4	85573.7	78475.2
Q64119	Q64119;D3ZHA7	MYL6_RAT	Myl6	Myosin light polypeptide 6	0	ALGQNPTNAEVLK	ALGQNPTNAEVLK	2	ALGQNPTNAEVLK2	8.29153e+06	8.41787e+06	9.58166e+06
Q64119	Q64119;D3ZHA7	MYL6_RAT	Myl6	Myosin light polypeptide 6	0	ALGQNPTNAEVLK	ALGQNPTNAEVLK	3	ALGQNPTNAEVLK3		10028.8	13664.2
Q64119	Q64119;D3ZHA7	MYL6_RAT	Myl6	Myosin light polypeptide 6	0	ALGQNPTNAEVLKVLGNPK	ALGQNPTNAEVLKVLGNPK	3	ALGQNPTNAEVLKVLGNPK3	15821	16025.3	12445.5
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	ALGSHVIHSTHTLPLTMTNQQGVK	ALGSHVIHSTHTLPLTMTNQQGVK	3	ALGSHVIHSTHTLPLTMTNQQGVK3	44204.5	40479.9	26490.8
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	ALGSHVIHSTHTLPLTMTNQQGVK	ALGSHVIHSTHTLPLTMTNQQGVK	4	ALGSHVIHSTHTLPLTMTNQQGVK4	318458	375800	340276
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	ALGSLGGSPSLPDQDK	ALGSLGGSPSLPDQDK	2	ALGSLGGSPSLPDQDK2	66698.8	89906.3	89373.7
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	ALGSNDPMQSILSSLEQQHEEEK	ALGSNDPMQSILSSLEQQHEEEK	3	ALGSNDPMQSILSSLEQQHEEEK3	22914.7	36910.8	18937.9
Q53E76	Q53E76	GTDC1_RAT	Gtdc1	Glycosyltransferase-like domain-containing protein 1	1	ALGSSVLHWGYLPSK	ALGSSVLHWGYLPSK	3	ALGSSVLHWGYLPSK3	7397.1		3016.2
P97535	P97535	PLA1A_RAT	Pla1a	Phospholipase A1 member A	1	ALGTKPSWINK	ALGTKPSWINK	2	ALGTKPSWINK2	4912.81	7320.41	8840.12
P97535	P97535	PLA1A_RAT	Pla1a	Phospholipase A1 member A	1	ALGTKPSWINK	ALGTKPSWINK	3	ALGTKPSWINK3	236734	199317	198309
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	ALGTLGMTTNEK	ALGTLGMTTNEK	2	ALGTLGMTTNEK2	51245.1	56235.8	44696.7
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	ALGTLLHTNLR	ALGTLLHTNLR	2	ALGTLLHTNLR2	7476.16	4185.65	3823.68
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	ALGTLLHTNLR	ALGTLLHTNLR	3	ALGTLLHTNLR3	25646.4	30633.8	40435.1
A0A8I5YC36	A0A8I5YC36	A0A8I5YC36_RAT	Ranbp2	RAN binding protein 2	1	ALGTNASTAANHTLR	ALGTNASTAANHTLR	3	ALGTNASTAANHTLR3	3068.45		2961.66
P02600	P02600	MYL1_RAT	Myl1	Myosin light chain 1/3, skeletal muscle isoform	1	ALGTNPTNAEVK	ALGTNPTNAEVK	2	ALGTNPTNAEVK2	2110.89	10653.1	1801.53
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	ALGVAVATGLHTELGK	ALGVAVATGLHTELGK	2	ALGVAVATGLHTELGK2	44789.2	45765.2	45460.1
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	ALGVAVATGLHTELGK	ALGVAVATGLHTELGK	3	ALGVAVATGLHTELGK3	275835	281053	266852
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	ALGVESGGGLPQYHK	ALGVESGGGLPQYHK	3	ALGVESGGGLPQYHK3	14070.1	5973.33	15423.2
Q8VHF5	Q8VHF5	CISY_RAT	Cs	Citrate synthase, mitochondrial	1	ALGVLAQLIWSR	ALGVLAQLIWSR	2	ALGVLAQLIWSR2	55257.6	32688.3	36836.3
Q8VHF5	Q8VHF5	CISY_RAT	Cs	Citrate synthase, mitochondrial	1	ALGVLAQLIWSR	ALGVLAQLIWSR	3	ALGVLAQLIWSR3	5814.89	2305.73	2349.94
Q09325	Q09325	MGAT1_RAT	Mgat1	Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	1	ALGVMDDLK	ALGVMDDLK	2	ALGVMDDLK2	34847.4	31381.6	27716.5
Q1HAQ0	Q1HAQ0	PCAT1_RAT	Lpcat1	Lysophosphatidylcholine acyltransferase 1	1	ALGVSVTDYTFEDCQLALAEGQLR	ALGVSVTDYTFEDC(UniMod:4)QLALAEGQLR	3	ALGVSVTDYTFEDC(UniMod:4)QLALAEGQLR3	10684.7	12948.8	6559.65
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	ALGVTEDR	ALGVTEDR	2	ALGVTEDR2	90229.5	113327	83695.5
Q9JLD2	Q9JLD2	NEUS_RAT	Serpini1	Neuroserpin	1	ALGVTEIFIK	ALGVTEIFIK	2	ALGVTEIFIK2	20635.1	8407.83	14290.9
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	ALGYFAVVTGK	ALGYFAVVTGK	2	ALGYFAVVTGK2	172541	158310	172742
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	ALGYFLK	ALGYFLK	2	ALGYFLK2	33215.7	29840.2	39965.6
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	ALGYLRAGYQRELNYK	ALGYLRAGYQRELNYK	3	ALGYLRAGYQRELNYK3	10412.6	7165.59	3451.83
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	ALGYNYK	ALGYNYK	2	ALGYNYK2	25591.6	31610.9	33200.5
P29315	P29315	RINI_RAT	Rnh1	Ribonuclease inhibitor	1	ALGYPDTVLR	ALGYPDTVLR	2	ALGYPDTVLR2	151620	125199	114469
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	ALGYVLDR	ALGYVLDR	2	ALGYVLDR2	243030	238187	252622
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	ALHEDLPSGSFIQEDMAHCSYLCEAGR	ALHEDLPSGSFIQEDMAHC(UniMod:4)SYLC(UniMod:4)EAGR	4	ALHEDLPSGSFIQEDMAHC(UniMod:4)SYLC(UniMod:4)EAGR4	18776.2	21950.6	20049.2
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	ALHHGIDLEK	ALHHGIDLEK	2	ALHHGIDLEK2	9395.51	4914.58	2724.64
A0A8I6ARV9	A0A8I6ARV9	A0A8I6ARV9_RAT	Ctsa	Carboxypeptidase	1	ALHIPESLPR	ALHIPESLPR	2	ALHIPESLPR2	44963.4	30494.3	36905.9
Q4V8I7	Q4V8I7	LRC8A_RAT	Lrrc8a	Volume-regulated anion channel subunit LRRC8A	1	ALHLGNNVLQSLPSR	ALHLGNNVLQSLPSR	2	ALHLGNNVLQSLPSR2		2774.63	
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	ALHLLEEYR	ALHLLEEYR	2	ALHLLEEYR2	1288.93	4027.82	6576.98
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	ALHLLEEYR	ALHLLEEYR	3	ALHLLEEYR3	8948.84	11342.4	20055.3
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	ALHLVGLK	ALHLVGLK	2	ALHLVGLK2	8201.94	1016.92	
Q9JM04	Q9JM04	IPO13_RAT	Ipo13	Importin-13	1	ALHQLYYDPNIENK	ALHQLYYDPNIENK	3	ALHQLYYDPNIENK3	9630.96	3083.51	8889.26
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	ALHQYTLEPSEKPFDMK	ALHQYTLEPSEKPFDMK	3	ALHQYTLEPSEKPFDMK3	46252.1	42023.3	34808.6
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	ALHQYTLEPSEKPFDMK	ALHQYTLEPSEKPFDMK	4	ALHQYTLEPSEKPFDMK4	197900	221494	225068
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	ALHSFITPPTTPQLR	ALHSFITPPTTPQLR	3	ALHSFITPPTTPQLR3	24869.5	32900.7	30857.3
A0A8I5ZLP5	A0A8I5ZLP5	A0A8I5ZLP5_RAT	Iqcb1	IQ motif containing B1	1	ALHSILDEILFK	ALHSILDEILFK	3	ALHSILDEILFK3	1599.8	3518.77	
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	ALHTQLEMQAK	ALHTQLEMQAK	2	ALHTQLEMQAK2	4224.86	1629.35	4905.95
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	ALHTQLEMQAK	ALHTQLEMQAK	3	ALHTQLEMQAK3	18441.8	14809.7	15859
D3ZT64	D3ZT64	D3ZT64_RAT	Atg2a	Autophagy related 2A	1	ALHVAPTGSVGGPECCLR	ALHVAPTGSVGGPEC(UniMod:4)C(UniMod:4)LR	3	ALHVAPTGSVGGPEC(UniMod:4)C(UniMod:4)LR3	9908.6	5690.07	8885.78
D3ZKE1	D3ZKE1	D3ZKE1_RAT	Uvrag	UV radiation resistance associated	1	ALHVELPSQQR	ALHVELPSQQR	3	ALHVELPSQQR3	21623.7	18913.4	25563.9
Q68FR6	Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	1	ALIAAQYSGAQIR	ALIAAQYSGAQIR	2	ALIAAQYSGAQIR2	58334.2	56129.8	52821.5
Q68FR6	Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	1	ALIAAQYSGAQIR	ALIAAQYSGAQIR	3	ALIAAQYSGAQIR3	60798.1	71974.1	74213.4
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	ALIADSGLK	ALIADSGLK	2	ALIADSGLK2	131298	111813	146596
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	ALIAEATK	ALIAEATK	2	ALIAEATK2	48617.6	49357.1	53358.1
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	ALIAGGGAPEIELALR	ALIAGGGAPEIELALR	2	ALIAGGGAPEIELALR2	108570	133368	102252
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	ALIAGGGAPEIELALR	ALIAGGGAPEIELALR	3	ALIAGGGAPEIELALR3	15874.6	13144.6	12608.7
F1M6V8	F1M6V8	F1M6V8_RAT	Strn4	Striatin 4	1	ALIASAGADALAK	ALIASAGADALAK	2	ALIASAGADALAK2	11475.9	10581.1	12985.6
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	ALIASTILR	ALIASTILR	2	ALIASTILR2	3084.71		2110.84
P70470	P70470	LYPA1_RAT	Lypla1	Acyl-protein thioesterase 1	1	ALIDQEVK	ALIDQEVK	2	ALIDQEVK2	23671.4	16904.7	28364.6
Q9JHW1	Q9JHW1	CBPD_RAT	Cpd	Carboxypeptidase D	1	ALIDWIR	ALIDWIR	2	ALIDWIR2	14455.2	14210.4	14185.2
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	ALIDYENSNK	ALIDYENSNK	2	ALIDYENSNK2	127669	84915.3	165412
B5DEH2	B5DEH2	ERLN2_RAT	Erlin2	Erlin-2	1	ALIEAEK	ALIEAEK	2	ALIEAEK2	129658	133214	137967
Q9QYL8	Q9QYL8	LYPA2_RAT	Lypla2	Acyl-protein thioesterase 2	1	ALIEHEMK	ALIEHEMK	2	ALIEHEMK2	6739.27	6927.04	
P48037	P48037	ANXA6_RAT	Anxa6	Annexin A6	1	ALIEILATR	ALIEILATR	2	ALIEILATR2	1875.87	4126.67	
Q9QZM5	Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	1	ALIESYQNLTR	ALIESYQNLTR	2	ALIESYQNLTR2	149550	117463	135229
Q8R431	Q8R431	MGLL_RAT	Mgll	Monoglyceride lipase	1	ALIFVSHGAGEHCGR	ALIFVSHGAGEHC(UniMod:4)GR	3	ALIFVSHGAGEHC(UniMod:4)GR3	65980.7	56709.1	50577.9
Q8R431	Q8R431	MGLL_RAT	Mgll	Monoglyceride lipase	1	ALIFVSHGAGEHCGR	ALIFVSHGAGEHC(UniMod:4)GR	4	ALIFVSHGAGEHC(UniMod:4)GR4	53345	72351.1	52076.5
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	ALIHLPLEYNFALYSR	ALIHLPLEYNFALYSR	2	ALIHLPLEYNFALYSR2		7436.71	8425.88
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	ALIHLPLEYNFALYSR	ALIHLPLEYNFALYSR	3	ALIHLPLEYNFALYSR3	78491.6	62070.5	55182.1
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	ALIINTNPVEVYK	ALIINTNPVEVYK	2	ALIINTNPVEVYK2	94144.1	119113	92057.2
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	ALILCGGYSVVDVTTFIGSK	ALILC(UniMod:4)GGYSVVDVTTFIGSK	3	ALILC(UniMod:4)GGYSVVDVTTFIGSK3	28299.4	23118.1	24775.4
Q6AYE5	Q6AYE5	OAF_RAT	Oaf	Out at first protein homolog	1	ALILGELEK	ALILGELEK	2	ALILGELEK2	33088.2	27691.1	32749
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	ALILGIYK	ALILGIYK	1	ALILGIYK1	7487.82	8691.73	5229.68
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	ALILGIYK	ALILGIYK	2	ALILGIYK2	691661	688787	600327
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	ALINADELANDVAGAEALLDR	ALINADELANDVAGAEALLDR	3	ALINADELANDVAGAEALLDR3	156390	197618	130244
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	ALINADELANDVAGAEALLDRHQEHK	ALINADELANDVAGAEALLDRHQEHK	3	ALINADELANDVAGAEALLDRHQEHK3	2090.66		
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	ALINADELANDVAGAEALLDRHQEHK	ALINADELANDVAGAEALLDRHQEHK	4	ALINADELANDVAGAEALLDRHQEHK4	81855.7	37784.3	36862.2
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	ALIPQCSDGK	ALIPQC(UniMod:4)SDGK	2	ALIPQC(UniMod:4)SDGK2	1.21605e+06	1.25911e+06	1.39304e+06
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	ALIPQCSDGKDLYLLTGAVPSDHK	ALIPQC(UniMod:4)SDGKDLYLLTGAVPSDHK	3	ALIPQC(UniMod:4)SDGKDLYLLTGAVPSDHK3	13599.1	18213.9	11674.5
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	ALIPQCSDGKDLYLLTGAVPSDHK	ALIPQC(UniMod:4)SDGKDLYLLTGAVPSDHK	4	ALIPQC(UniMod:4)SDGKDLYLLTGAVPSDHK4	50485.3	59786.3	71163.1
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	ALIPYYISFK	ALIPYYISFK	2	ALIPYYISFK2	369836	625316	590931
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	ALIPYYISFKK	ALIPYYISFKK	3	ALIPYYISFKK3	6639.06	12325.7	15097.7
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	ALIQCAK	ALIQC(UniMod:4)AK	1	ALIQC(UniMod:4)AK1	14661.8	10032.8	8005.03
Q8VHI8	Q8VHI8	SEC20_RAT	Bnip1	Vesicle transport protein SEC20	1	ALIQDIR	ALIQDIR	2	ALIQDIR2	76947.9	82091.1	46047.2
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	ALIQYFSPYVSADMHK	ALIQYFSPYVSADMHK	3	ALIQYFSPYVSADMHK3	60617.4	70936.8	80804.2
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ALITEHQSFMEEMTR	ALITEHQSFMEEMTR	3	ALITEHQSFMEEMTR3	11059.6	36759.9	22238.2
Q66HC5	Q66HC5	NUP93_RAT	Nup93	Nuclear pore complex protein Nup93	1	ALITFAGMIPYR	ALITFAGMIPYR	2	ALITFAGMIPYR2	6074.14	11926.9	14501.3
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	ALIVEPSR	ALIVEPSR	2	ALIVEPSR2	46166.1	28462.9	46814.8
A0A8I6G8P8	A0A8I6G8P8	A0A8I6G8P8_RAT	ENSRNOG00000063277	Ig-like domain-containing protein	1	ALIYHASIR	ALIYHASIR	2	ALIYHASIR2	58194.7	39585.9	34806
A0A8I6A0F4	A0A8I6A0F4	A0A8I6A0F4_RAT	ENSRNOG00000064697	Ig-like domain-containing protein	1	ALIYHASVR	ALIYHASVR	2	ALIYHASVR2	26301.1	15496.7	19306.6
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	ALIYLWHGCK	ALIYLWHGC(UniMod:4)K	2	ALIYLWHGC(UniMod:4)K2	2459.12	6227.54	4754.61
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	ALIYLWHGCK	ALIYLWHGC(UniMod:4)K	3	ALIYLWHGC(UniMod:4)K3	32783.6	36089.1	35444.6
Q9QX79	Q9QX79	FETUB_RAT	Fetub	Fetuin-B	1	ALKDCGPR	ALKDC(UniMod:4)GPR	2	ALKDC(UniMod:4)GPR2			5003.33
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	ALKDEEK	ALKDEEK	1	ALKDEEK1		927.889	
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	ALKDEISQLGGLLK	ALKDEISQLGGLLK	3	ALKDEISQLGGLLK3		2874.18	5865.03
D3ZAZ0	D3ZAZ0	D3ZAZ0_RAT	Eif3m	Eukaryotic translation initiation factor 3 subunit M	1	ALKDPNAFLFDHLLTLKPVK	ALKDPNAFLFDHLLTLKPVK	3	ALKDPNAFLFDHLLTLKPVK3	5203.39	9535.95	7748.75
D3ZAZ0	D3ZAZ0	D3ZAZ0_RAT	Eif3m	Eukaryotic translation initiation factor 3 subunit M	1	ALKDPNAFLFDHLLTLKPVK	ALKDPNAFLFDHLLTLKPVK	4	ALKDPNAFLFDHLLTLKPVK4	74166.7	72689	76811.1
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	ALKDPNQLIR	ALKDPNQLIR	3	ALKDPNQLIR3	80698.2	84890.1	73492.3
A0A8I5ZV26	A0A8I5ZV26	A0A8I5ZV26_RAT	Stom	Stomatin	1	ALKEASMVITESPAALQLR	ALKEASMVITESPAALQLR	3	ALKEASMVITESPAALQLR3	8598.14	12507.8	10656.9
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	ALKEDDPK	ALKEDDPK	2	ALKEDDPK2			56300.4
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	ALKEQLSEQTHK	ALKEQLSEQTHK	3	ALKEQLSEQTHK3	4084.01	7291.8	8027.32
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	ALKPANMLER	ALKPANMLER	2	ALKPANMLER2	18161.9	12235.9	30965.7
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	ALKPANMLER	ALKPANMLER	3	ALKPANMLER3	37176.1	92049.2	15888.2
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	ALKPPCDLSMQSVEVTGTTEGVR	ALKPPC(UniMod:4)DLSMQSVEVTGTTEGVR	3	ALKPPC(UniMod:4)DLSMQSVEVTGTTEGVR3	21285.4	17130.1	20555.7
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	ALKPTVFPTVPR	ALKPTVFPTVPR	2	ALKPTVFPTVPR2	17577	13657.4	21700.6
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	ALKPTVFPTVPR	ALKPTVFPTVPR	3	ALKPTVFPTVPR3	265336	218510	239460
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	ALKQPLSANTLSDVLSR	ALKQPLSANTLSDVLSR	3	ALKQPLSANTLSDVLSR3	9790.24	24431.2	24161
P48199	P48199	CRP_RAT	Crp	C-reactive protein	1	ALKYETHGDVFIKPQLWPLTDCCES	ALKYETHGDVFIKPQLWPLTDC(UniMod:4)C(UniMod:4)ES	4	ALKYETHGDVFIKPQLWPLTDC(UniMod:4)C(UniMod:4)ES4	44862.6	95294.8	99993.1
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	ALLADAQIMLDHLK	ALLADAQIMLDHLK	3	ALLADAQIMLDHLK3	15826.9	20243.7	11022.7
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	ALLADIEAHYR	ALLADIEAHYR	3	ALLADIEAHYR3		8414.83	
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	ALLADIEAHYRDPSLPYPK	ALLADIEAHYRDPSLPYPK	3	ALLADIEAHYRDPSLPYPK3	17744	11569	12594
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	ALLADIEAHYRDPSLPYPK	ALLADIEAHYRDPSLPYPK	4	ALLADIEAHYRDPSLPYPK4	15888.9	26282.3	17563.6
D3ZIN7	D3ZIN7	D3ZIN7_RAT	Mrps23	Mitochondrial ribosomal protein S23	1	ALLAEGVILR	ALLAEGVILR	2	ALLAEGVILR2	5034.13	9220.99	2688.51
P57113	P57113	MAAI_RAT	Gstz1	Maleylacetoacetate isomerase	1	ALLALEAFQVSHPCR	ALLALEAFQVSHPC(UniMod:4)R	3	ALLALEAFQVSHPC(UniMod:4)R3	15144.6	12264.2	12469.7
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	ALLALQR	ALLALQR	2	ALLALQR2	85770.9	81017.6	78013.4
Q9Z142	Q9Z142	TMM33_RAT	Tmem33	Transmembrane protein 33	1	ALLANALTSALR	ALLANALTSALR	2	ALLANALTSALR2	41418.9	61005.2	32977.7
A0A8I5Y868	A0A8I5Y868	A0A8I5Y868_RAT	Klc2	Kinesin light chain	1	ALLAPLASHEAGEAEPGSQER	ALLAPLASHEAGEAEPGSQER	3	ALLAPLASHEAGEAEPGSQER3	29618.7	25296.6	22463.2
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	ALLAQGQSSEQAAK	ALLAQGQSSEQAAK	2	ALLAQGQSSEQAAK2	104588	99564.6	105998
Q5SGD7	Q5SGD7	CNKR3_RAT	Cnksr3	Connector enhancer of kinase suppressor of ras 3	1	ALLAWLDR	ALLAWLDR	2	ALLAWLDR2	1778.42	3803.72	
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	ALLAYAFALAGNQDTK	ALLAYAFALAGNQDTK	2	ALLAYAFALAGNQDTK2	3337.51		7695.35
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	ALLAYAFALAGNR	ALLAYAFALAGNR	2	ALLAYAFALAGNR2	852991	925395	810861
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	ALLAYAFALAGNR	ALLAYAFALAGNR	3	ALLAYAFALAGNR3	1.26752e+06	1.12035e+06	1.06809e+06
Q9ES58	Q9ES58	MO2R1_RAT	Cd200r1	Cell surface glycoprotein CD200 receptor 1	1	ALLCCPSISLTK	ALLC(UniMod:4)C(UniMod:4)PSISLTK	2	ALLC(UniMod:4)C(UniMod:4)PSISLTK2	47665.2	45650.9	48845.8
P97612	P97612	FAAH1_RAT	Faah	Fatty-acid amide hydrolase 1	1	ALLCEHLFTLDPTVPPLPFR	ALLC(UniMod:4)EHLFTLDPTVPPLPFR	3	ALLC(UniMod:4)EHLFTLDPTVPPLPFR3	4658.51		9244.62
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	ALLCSVCK	ALLC(UniMod:4)SVC(UniMod:4)K	2	ALLC(UniMod:4)SVC(UniMod:4)K2	52277.2	59696.2	59116.1
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	ALLDFEDK	ALLDFEDK	2	ALLDFEDK2	168330	159180	166936
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	ALLDFEDKNGDK	ALLDFEDKNGDK	3	ALLDFEDKNGDK3	46884.9	54618.6	63731.5
M0RCP2	M0RCP2	M0RCP2_RAT	Sh3pxd2b	SH3 and PX domains 2B	1	ALLDGESHHAAGGHDTALGR	ALLDGESHHAAGGHDTALGR	4	ALLDGESHHAAGGHDTALGR4	5808.02	9092.37	4345.99
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	ALLDQEGNR	ALLDQEGNR	2	ALLDQEGNR2	79336.4	55065.2	43616.6
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	ALLDQEGNRR	ALLDQEGNRR	2	ALLDQEGNRR2	26174.7	29880.2	
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	ALLDQEGNRR	ALLDQEGNRR	3	ALLDQEGNRR3	2.4697e+06	1.82539e+06	2.5833e+06
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	ALLEEAYDNLK	ALLEEAYDNLK	2	ALLEEAYDNLK2	9044.49	9851.23	11531.6
P30427	P30427	PLEC_RAT	Plec	Plectin	1	ALLEEIER	ALLEEIER	2	ALLEEIER2	9754.13	12012.6	11565.8
A0A0G2K2G7	A0A0G2K2G7	A0A0G2K2G7_RAT	Anks1a	Ankyrin repeat and sterile alpha motif domain containing 1A	1	ALLEELTDPTMR	ALLEELTDPTMR	2	ALLEELTDPTMR2	5967.95	2661.63	6972.93
A0A8I6AIV4	A0A8I6AIV4	A0A8I6AIV4_RAT	Dctn3l1	Dynactin 3-like 1	1	ALLEEYNK	ALLEEYNK	1	ALLEEYNK1	2168.58	474.274	1338.3
A0A8I6AIV4	A0A8I6AIV4	A0A8I6AIV4_RAT	Dctn3l1	Dynactin 3-like 1	1	ALLEEYNK	ALLEEYNK	2	ALLEEYNK2	91158.9	123135	109817
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	ALLEFLQR	ALLEFLQR	2	ALLEFLQR2	7678.72	7158.11	13107.5
D3ZTA9	D3ZGJ6;D3ZTA9;D3ZWF9;D3ZFR1	D3ZTA9_RAT	Hs3st3b1	Sulfotransferase	0	ALLEFLR	ALLEFLR	2	ALLEFLR2	14607.9	9185.87	8803.69
A0A0G2JTM9	A0A0G2JTM9	A0A0G2JTM9_RAT	Dnajb14	DnaJ heat shock protein family (Hsp40) member B14	1	ALLEIIMK	ALLEIIMK	2	ALLEIIMK2	12042.8	3920.6	
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	ALLELQLEPEELYQTFQR	ALLELQLEPEELYQTFQR	3	ALLELQLEPEELYQTFQR3	4915.53	3826.62	6361.48
B2GV14	B2GV14	B2GV14_RAT	Txlna	Taxilin alpha	1	ALLEMAEEK	ALLEMAEEK	2	ALLEMAEEK2	14948.2	11650.1	11763.7
O35763	O35763	MOES_RAT	Msn	Moesin	1	ALLENEK	ALLENEK	2	ALLENEK2	294109	323061	328628
O35763	O35763	MOES_RAT	Msn	Moesin	1	ALLENEKK	ALLENEKK	2	ALLENEKK2	4953.94	21380	25983.5
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	ALLEPTNTPFK	ALLEPTNTPFK	2	ALLEPTNTPFK2	32796.2	30649.7	29697.4
B1WBU6	B1WBU6;A0A8I5ZYI4	B1WBU6_RAT	Smox	Spermine oxidase	0	ALLEQGFTDVTVLEASSHIGGR	ALLEQGFTDVTVLEASSHIGGR	3	ALLEQGFTDVTVLEASSHIGGR3		8410.83	
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	ALLEVDR	ALLEVDR	2	ALLEVDR2	81780	84964.8	57214.6
O35952	O35952	GLO2_RAT	Hagh	Hydroxyacylglutathione hydrolase, mitochondrial	1	ALLEVLGR	ALLEVLGR	2	ALLEVLGR2	8550.27	9708.34	5424.9
P48004	F1M6I7;P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	0	ALLEVVQSGGK	ALLEVVQSGGK	2	ALLEVVQSGGK2	2.89818e+06	29171.9	50352.8
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	ALLFGHTAAITCLSK	ALLFGHTAAITC(UniMod:4)LSK	3	ALLFGHTAAITC(UniMod:4)LSK3	11088.6	7673.94	11149.8
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	ALLFIPR	ALLFIPR	1	ALLFIPR1			3293.48
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	ALLFIPR	ALLFIPR	2	ALLFIPR2	3.23299e+06	3.73734e+06	3.72082e+06
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	ALLFSNNSQELHPDPFQAEDPFK	ALLFSNNSQELHPDPFQAEDPFK	3	ALLFSNNSQELHPDPFQAEDPFK3		7382.28	6427.12
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	ALLFVPR	ALLFVPR	2	ALLFVPR2	2.00605e+06	2.21879e+06	2.02886e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ALLGDAK	ALLGDAK	1	ALLGDAK1	16444.1	11765.4	13198.7
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	ALLGDKDDR	ALLGDKDDR	2	ALLGDKDDR2	18911	21114.7	22938.4
P70483	P70483	STRN_RAT	Strn	Striatin	1	ALLGFSSDVTDR	ALLGFSSDVTDR	2	ALLGFSSDVTDR2		3954.92	
P70483	P70483	STRN_RAT	Strn	Striatin	1	ALLGFSSDVTDREDDK	ALLGFSSDVTDREDDK	3	ALLGFSSDVTDREDDK3	47273.9	43387.4	37483.1
P70483	P70483	STRN_RAT	Strn	Striatin	1	ALLGFSSDVTDREDDKNQDSVINGTEAEVK	ALLGFSSDVTDREDDKNQDSVINGTEAEVK	4	ALLGFSSDVTDREDDKNQDSVINGTEAEVK4	11574.1		18480.2
O35547	O35547	ACSL4_RAT	Acsl4	Long-chain-fatty-acid--CoA ligase 4	1	ALLGGNVR	ALLGGNVR	2	ALLGGNVR2	26018.2	39163.5	23660.2
D3ZV75	D3ZV75	D3ZV75_RAT	Mfsd1	Major facilitator superfamily domain containing 1	1	ALLGGRPEADSALQGAPR	ALLGGRPEADSALQGAPR	3	ALLGGRPEADSALQGAPR3	59988.8	40468.1	46641.2
P0C0T0	P0C0T0	LITAF_RAT	Litaf	Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog	1	ALLGTYK	ALLGTYK	1	ALLGTYK1	9176.16	7688.88	8594.35
P0C0T0	P0C0T0	LITAF_RAT	Litaf	Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog	1	ALLGTYK	ALLGTYK	2	ALLGTYK2	789999	923140	877846
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	ALLHEGSESTNR	ALLHEGSESTNR	3	ALLHEGSESTNR3	15472.1	25278.3	21971.4
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	ALLHEGSESTNRR	ALLHEGSESTNRR	3	ALLHEGSESTNRR3	39678.4	43137.5	45814
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	ALLHSGSNSSK	ALLHSGSNSSK	2	ALLHSGSNSSK2	8631.69	13591.4	9039.99
Q5RJK8	Q5RJK8	ACBD6_RAT	Acbd6	Acyl-CoA-binding domain-containing protein 6	1	ALLHWACDR	ALLHWAC(UniMod:4)DR	3	ALLHWAC(UniMod:4)DR3	6078.6	14436.6	6278.19
Q80Z70	Q80Z70	SE1L1_RAT	Sel1l	Protein sel-1 homolog 1	1	ALLHWNR	ALLHWNR	2	ALLHWNR2	2651.04	3539.7	9805.55
A0A0G2K8F9	A0A0G2K8F9	A0A0G2K8F9_RAT	Pum2	Pumilio RNA-binding family member 2	1	ALLIDEVCCQNDGPHSALYTMMK	ALLIDEVC(UniMod:4)C(UniMod:4)QNDGPHSALYTMMK	3	ALLIDEVC(UniMod:4)C(UniMod:4)QNDGPHSALYTMMK3		9414.92	4811.73
P35572	P35572	IBP6_RAT	Igfbp6	Insulin-like growth factor-binding protein 6	1	ALLIGQGR	ALLIGQGR	2	ALLIGQGR2	11502.7	11250.4	12643.1
A8WCF8	A8WCF8	TPRGL_RAT	Tprg1l	Tumor protein p63-regulated gene 1-like protein	1	ALLIQAVK	ALLIQAVK	2	ALLIQAVK2	224785	193206	203909
D4A7F0	D4A7F0	D4A7F0_RAT	Ubr3	E3 ubiquitin-protein ligase	1	ALLIQESR	ALLIQESR	2	ALLIQESR2	17853.9	19785.3	6214.96
D4ABB3	D4ABB3	D4ABB3_RAT	Adamts17	ADAM metallopeptidase with thrombospondin type 1 motif, 17	1	ALLLHLPAFGR	ALLLHLPAFGR	3	ALLLHLPAFGR3	3655.22		9061.11
A0A8I6AC50	A0A8I6AC50	A0A8I6AC50_RAT	Ttc13	Tetratricopeptide repeat domain 13	1	ALLLNQNHVQTLQLR	ALLLNQNHVQTLQLR	3	ALLLNQNHVQTLQLR3	12684.5	18516.6	7998.47
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	ALLLPDHYLVTVMLSGIK	ALLLPDHYLVTVMLSGIK	3	ALLLPDHYLVTVMLSGIK3	27491.5	31111.5	27876.5
P58200	P58200	VTI1B_RAT	Vti1b	Vesicle transport through interaction with t-SNAREs homolog 1B	1	ALLLQGTESLNR	ALLLQGTESLNR	2	ALLLQGTESLNR2	55660.6	59045.3	50983
P18484	P18484;A0A8I6A4J2	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	0	ALLLSTYIK	ALLLSTYIK	2	ALLLSTYIK2	106262	80071.9	69231.6
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	ALLLTDR	ALLLTDR	2	ALLLTDR2	137597	152666	142862
Q5RK00	Q5RK00	RM46_RAT	Mrpl46	Large ribosomal subunit protein mL46	1	ALLLTGDFVQTGK	ALLLTGDFVQTGK	2	ALLLTGDFVQTGK2	9129.61	7243.09	
Q66HA4	Q66HA4	TAXB1_RAT	Tax1bp1	Tax1-binding protein 1 homolog	1	ALLLTTSNK	ALLLTTSNK	2	ALLLTTSNK2	7940.24	6450.62	4833.89
A0A0G2K652	A0A0G2K652	A0A0G2K652_RAT	Cul9	Cullin 9	1	ALLLTVLR	ALLLTVLR	2	ALLLTVLR2	3391.09	1626.98	
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	ALLMGGSALSPAAIISPDR	ALLMGGSALSPAAIISPDR	2	ALLMGGSALSPAAIISPDR2	12054.1	10005.7	10146.9
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	ALLMGGSALSPAAIISPDR	ALLMGGSALSPAAIISPDR	3	ALLMGGSALSPAAIISPDR3	4909.98	6005.85	5668.35
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	ALLNLVPVQK	ALLNLVPVQK	2	ALLNLVPVQK2	87388.3	78544.6	87971.4
Q6P6R2	Q6P6R2	DLDH_RAT	Dld	Dihydrolipoyl dehydrogenase, mitochondrial	1	ALLNNSHYYHLAHGK	ALLNNSHYYHLAHGK	3	ALLNNSHYYHLAHGK3	28265.2	43892.6	28348.1
Q6P6R2	Q6P6R2	DLDH_RAT	Dld	Dihydrolipoyl dehydrogenase, mitochondrial	1	ALLNNSHYYHLAHGK	ALLNNSHYYHLAHGK	4	ALLNNSHYYHLAHGK4	53007.9	61032.2	46661.8
Q498R3	Q498R3	DJC10_RAT	Dnajc10	DnaJ homolog subfamily C member 10	1	ALLPELR	ALLPELR	2	ALLPELR2	27713.7	20783.1	24012.7
O88483	O88483	PDP1_RAT	Pdp1	[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial	1	ALLPILQWHK	ALLPILQWHK	3	ALLPILQWHK3	9111.75	6420.07	7157.25
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	ALLPLALEGTDVGQTK	ALLPLALEGTDVGQTK	2	ALLPLALEGTDVGQTK2	32569	27009.1	25332.1
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	ALLPLLLESSTESAAEISSNSLER	ALLPLLLESSTESAAEISSNSLER	3	ALLPLLLESSTESAAEISSNSLER3	8705.04	10021.2	11053.2
Q5RJY4	Q5RJY4	DRS7B_RAT	Dhrs7b	Dehydrogenase/reductase SDR family member 7B	1	ALLPSMVER	ALLPSMVER	2	ALLPSMVER2	24745.7	28487.8	24992
P08650	P08650	CO5_RAT	C5	Complement C5	1	ALLPVMK	ALLPVMK	1	ALLPVMK1	24438.9	21180.8	10092.3
P08650	P08650	CO5_RAT	C5	Complement C5	1	ALLPVMK	ALLPVMK	2	ALLPVMK2	1.17359e+06	929982	793030
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	ALLPVPQHLNPVR	ALLPVPQHLNPVR	2	ALLPVPQHLNPVR2	19185.4	9507.87	12803.4
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	ALLPVPQHLNPVR	ALLPVPQHLNPVR	3	ALLPVPQHLNPVR3	274780	296592	264996
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	ALLQAILQTEDMLK	ALLQAILQTEDMLK	2	ALLQAILQTEDMLK2	17084.7	4309.42	8038.7
D3ZRN5	D3ZRN5	D3ZRN5_RAT	Ro60	Ro60, Y RNA binding protein	1	ALLQEMPLTALLR	ALLQEMPLTALLR	2	ALLQEMPLTALLR2	13943.1	9896.22	11984.9
P50233	G3V725;P50233	DHI2_RAT	Hsd11b2	11-beta-hydroxysteroid dehydrogenase type 2	0	ALLQLLR	ALLQLLR	2	ALLQLLR2	6845.79	5088.05	6876.62
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	ALLQLWQR	ALLQLWQR	2	ALLQLWQR2	4322.17		2860.07
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	ALLQMVQQFGVDFEK	ALLQMVQQFGVDFEK	2	ALLQMVQQFGVDFEK2	23621.5	10509.2	20091
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	ALLQMVQQFGVDFEK	ALLQMVQQFGVDFEK	3	ALLQMVQQFGVDFEK3	13593.1	19899.1	23743.4
D3ZJF9	D3ZJF9	D3ZJF9_RAT	Gla	Alpha-galactosidase	1	ALLQNEDVIAINQDPLGK	ALLQNEDVIAINQDPLGK	2	ALLQNEDVIAINQDPLGK2	24699	17253.3	11398
D3ZJF9	D3ZJF9	D3ZJF9_RAT	Gla	Alpha-galactosidase	1	ALLQNEDVIAINQDPLGK	ALLQNEDVIAINQDPLGK	3	ALLQNEDVIAINQDPLGK3	17484.5	12099.4	10676.9
B2RYI2	B2RYI2	B2RYI2_RAT	Srp68	Signal recognition particle subunit SRP68	1	ALLQQQPEDDSK	ALLQQQPEDDSK	2	ALLQQQPEDDSK2	3099.03		1760.42
Q6AYB4	Q6AYB4	HSP7E_RAT	Hspa14	Heat shock 70 kDa protein 14	1	ALLQQSGFTADDINK	ALLQQSGFTADDINK	2	ALLQQSGFTADDINK2	3999.13	1370.13	4251.02
Q6AYD3	Q6AYD3	PA2G4_RAT	Pa2g4	Proliferation-associated protein 2G4	1	ALLQSSASR	ALLQSSASR	2	ALLQSSASR2	69821.8	57750.4	61934.1
Q6AY97	Q6AY97	CCD91_RAT	Ccdc91	Coiled-coil domain-containing protein 91	1	ALLQSSVK	ALLQSSVK	2	ALLQSSVK2	29814.5	24772.7	33054.5
Q641X3	Q641X3	HEXA_RAT	Hexa	Beta-hexosaminidase subunit alpha	1	ALLSAPWYLNR	ALLSAPWYLNR	2	ALLSAPWYLNR2	42130.4	46633	58720.1
Q68EJ0	Q68EJ0	NB5R4_RAT	Cyb5r4	Cytochrome b5 reductase 4	1	ALLSEFLQR	ALLSEFLQR	2	ALLSEFLQR2	27431.7	28939.3	15392.9
D3ZGJ0	D3ZGJ0	D3ZGJ0_RAT	Dhx32	DEAH-box helicase 32 (putative)	1	ALLSGYFMQIAR	ALLSGYFMQIAR	2	ALLSGYFMQIAR2	4309.41	4617.44	4414.99
Q62921	Q62921	HOIL1_RAT	Rbck1	RanBP-type and C3HC4-type zinc finger-containing protein 1	1	ALLSPEDYQR	ALLSPEDYQR	2	ALLSPEDYQR2	5858.64	14254	10569.1
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	ALLSPQPGNTLDR	ALLSPQPGNTLDR	2	ALLSPQPGNTLDR2	10940.2	10169.8	5015
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	ALLSSPEGEEK	ALLSSPEGEEK	2	ALLSSPEGEEK2	25407.3	25540.5	44263.4
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	ALLSTLHTVLWDGESR	ALLSTLHTVLWDGESR	2	ALLSTLHTVLWDGESR2	5076.46		758.336
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	ALLSTLHTVLWDGESR	ALLSTLHTVLWDGESR	3	ALLSTLHTVLWDGESR3	22962.1	26164.1	17772
F1M332	F1M332	F1M332_RAT	Arhgap28	Rho GTPase activating protein 28	1	ALLSTLTR	ALLSTLTR	2	ALLSTLTR2	53010.8	51484.4	54998.4
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	ALLSVHDTVAQK	ALLSVHDTVAQK	2	ALLSVHDTVAQK2	1513.27	1189.35	
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	ALLSVHDTVAQK	ALLSVHDTVAQK	3	ALLSVHDTVAQK3	50226.1	51460.7	64139.1
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	ALLSVLR	ALLSVLR	2	ALLSVLR2	7718.01	12196.5	16591.3
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	ALLTAVTSPHIEIHEGTILQTVR	ALLTAVTSPHIEIHEGTILQTVR	4	ALLTAVTSPHIEIHEGTILQTVR4	12196.3	6839.59	3944.25
A0A0G2JWD0	A0A0G2JWD0	A0A0G2JWD0_RAT	Prom1	Prominin 1	1	ALLTEAPK	ALLTEAPK	2	ALLTEAPK2	58931.9	66200.6	61627.4
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	ALLTECTVDAEAFNLR	ALLTEC(UniMod:4)TVDAEAFNLR	2	ALLTEC(UniMod:4)TVDAEAFNLR2	4986.31	6434.06	6404.4
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	ALLTGNFESAVDLCLHDNR	ALLTGNFESAVDLC(UniMod:4)LHDNR	3	ALLTGNFESAVDLC(UniMod:4)LHDNR3	2572.48	5171.87	2512.05
A0A8I5ZS17	A0A8I5ZS17	A0A8I5ZS17_RAT	Snx25	Sorting nexin 25	1	ALLTHFCDLK	ALLTHFC(UniMod:4)DLK	3	ALLTHFC(UniMod:4)DLK3	6754.12	10753	7465.61
D3ZUZ4	D3ZUZ4	D3ZUZ4_RAT	Fam20b	FAM20B, glycosaminoglycan xylosylkinase	1	ALLTLEGGQK	ALLTLEGGQK	2	ALLTLEGGQK2	23939	17687.8	18831.4
P70619	P70619	GSHR_RAT	Gsr	Glutathione reductase (Fragment)	1	ALLTPVAIAAGR	ALLTPVAIAAGR	2	ALLTPVAIAAGR2	93523.3	80211.9	85664.4
Q5M9G9	Q5M9G9	FAKD4_RAT	Tbrg4	FAST kinase domain-containing protein 4	1	ALLVEDAR	ALLVEDAR	2	ALLVEDAR2	27306.8	22075.1	21141.2
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	ALLVEVQLLESK	ALLVEVQLLESK	2	ALLVEVQLLESK2	59166.9	56305.9	67066.7
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	ALLVHDLQK	ALLVHDLQK	2	ALLVHDLQK2		2439.28	2904.19
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	ALLVTASQCQQPAGNK	ALLVTASQC(UniMod:4)QQPAGNK	2	ALLVTASQC(UniMod:4)QQPAGNK2	834270	799241	773920
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	ALLVTASQCQQPAGNK	ALLVTASQC(UniMod:4)QQPAGNK	3	ALLVTASQC(UniMod:4)QQPAGNK3	560458	527667	590150
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	ALLYEAIGYSETAVDPTLPK	ALLYEAIGYSETAVDPTLPK	3	ALLYEAIGYSETAVDPTLPK3	9636.85	18502.7	10269.4
D3ZZB2	D3ZZB2	D3ZZB2_RAT	Pex1	Peroxisomal ATPase PEX1	1	ALLYNAQLEALQGR	ALLYNAQLEALQGR	2	ALLYNAQLEALQGR2	1738.17	4738.48	1285.04
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	ALLYYTNALNDSDSK	ALLYYTNALNDSDSK	2	ALLYYTNALNDSDSK2	49424.2	44070	48917.7
A1EC81	A1EC81	A1EC81_RAT	Mmp28	Matrix metallopeptidase 28	1	ALMAPYYK	ALMAPYYK	2	ALMAPYYK2	12610.5	12058.7	
Q3B7U1	Q3B7U1	Q3B7U1_RAT	Maged2	MAGE family member D2	1	ALMASMAR	ALMASMAR	2	ALMASMAR2	32394.1	30876.3	31216.9
P14046	A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	ALMAYAFALAGNQEK	ALMAYAFALAGNQEK	2	ALMAYAFALAGNQEK2	4.77776e+06	4.17192e+06	4.14328e+06
P14046	A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	ALMAYAFALAGNQEK	ALMAYAFALAGNQEK	3	ALMAYAFALAGNQEK3	3.54926e+06	721230	536961
P14046	A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	ALMAYAFALAGNQEKR	ALMAYAFALAGNQEKR	2	ALMAYAFALAGNQEKR2	29400.7	21639.4	17762.6
P14046	A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	ALMAYAFALAGNQEKR	ALMAYAFALAGNQEKR	3	ALMAYAFALAGNQEKR3	801814	816441	734739
P14046	A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	ALMAYAFALAGNQEKRNEILK	ALMAYAFALAGNQEKRNEILK	3	ALMAYAFALAGNQEKRNEILK3	24469.3	9814.82	8371.59
P14046	A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	ALMAYAFALAGNQEKRNEILK	ALMAYAFALAGNQEKRNEILK	4	ALMAYAFALAGNQEKRNEILK4	102921	64060.7	79624.8
Q6IE52	Q6IE52	MUG2_RAT	Mug2	Murinoglobulin-2	1	ALMAYAFTLAGNQEK	ALMAYAFTLAGNQEK	2	ALMAYAFTLAGNQEK2	39173.3	29066.7	30161.9
Q6IE52	Q6IE52	MUG2_RAT	Mug2	Murinoglobulin-2	1	ALMAYAFTLAGNQEK	ALMAYAFTLAGNQEK	3	ALMAYAFTLAGNQEK3	37119.4	32421.6	21164.9
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	ALMDGLSLESLLNFVK	ALMDGLSLESLLNFVK	2	ALMDGLSLESLLNFVK2	7513.08		
Q3KRD5	Q3KRD5	TOM34_RAT	Tomm34	Mitochondrial import receptor subunit TOM34	1	ALMDSLGPEWR	ALMDSLGPEWR	2	ALMDSLGPEWR2	6547.75	4096.63	9079.39
P51111	P51111	HD_RAT	Htt	Huntingtin	1	ALMDSNLPR	ALMDSNLPR	2	ALMDSNLPR2	98377.2	116282	84274.5
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	ALMEAVSHAK	ALMEAVSHAK	2	ALMEAVSHAK2	14601.2	13704.7	15655
D4A599	D4A599	D4A599_RAT	Dnah17	Dynein, axonemal, heavy chain 17	1	ALMEDAVK	ALMEDAVK	2	ALMEDAVK2	20731.9	24300	
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	ALMGLYNGQVLCK	ALMGLYNGQVLC(UniMod:4)K	2	ALMGLYNGQVLC(UniMod:4)K2	80213.9	85057.5	93327.5
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	ALMGQDLLGR	ALMGQDLLGR	2	ALMGQDLLGR2	50671.3	39644.4	48211.2
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	ALMGSPQLVAAVVR	ALMGSPQLVAAVVR	2	ALMGSPQLVAAVVR2	23776.7	11763.7	14452.2
A0A8I5Y4X4	A0A8I5Y4X4	A0A8I5Y4X4_RAT	Nub1	Negative regulator of ubiquitin-like proteins 1	1	ALMLAMGYHEK	ALMLAMGYHEK	3	ALMLAMGYHEK3	25394.8	25643.8	30270
A0A8J8Y4N8	A0A8J8Y4N8	A0A8J8Y4N8_RAT	Ube2r2	Ubiquitin-conjugating enzyme E2R 2	1	ALMLELK	ALMLELK	2	ALMLELK2	45306.9	59186.5	50396.7
P63039	A0A8I5ZVK6;A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	ALMLQGVDLLADAVAVTMGPK	ALMLQGVDLLADAVAVTMGPK	3	ALMLQGVDLLADAVAVTMGPK3	3874.7	76296.6	66435.6
A0A8I6GM04	A0A0G2K988;A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	0	ALMNNSQGR	ALMNNSQGR	2	ALMNNSQGR2	141216	96803.8	94637.2
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	ALMPVLLQGQAR	ALMPVLLQGQAR	2	ALMPVLLQGQAR2	195217	185831	215503
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	ALMPVLLQGQAR	ALMPVLLQGQAR	3	ALMPVLLQGQAR3	16104.8	14790.6	16697.2
Q5M872	Q5M872	DPEP2_RAT	Dpep2	Dipeptidase 2	1	ALMQDFPLIDGHNDLPLVLR	ALMQDFPLIDGHNDLPLVLR	3	ALMQDFPLIDGHNDLPLVLR3	18528.8	16517.2	19243.7
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	ALMQFAVAQR	ALMQFAVAQR	2	ALMQFAVAQR2	20317.7	28839.9	23314.8
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	ALMQLDFQQFLMK	ALMQLDFQQFLMK	2	ALMQLDFQQFLMK2		14958	
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	ALMSENTSLK	ALMSENTSLK	2	ALMSENTSLK2	48984.2	30493.8	29283
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	ALMSENTSLKK	ALMSENTSLKK	2	ALMSENTSLKK2	3588.94	5303.43	
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	ALMSENTSLKK	ALMSENTSLKK	3	ALMSENTSLKK3	17966.4	23337.5	22161.6
M0R9J2	M0R9J2	M0R9J2_RAT	Pigg	GPI ethanolamine phosphate transferase 2	1	ALMTGSLPGFVDVIR	ALMTGSLPGFVDVIR	2	ALMTGSLPGFVDVIR2		8124.47	9557.96
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	ALMTTVCYSAIIFETPLR	ALMTTVC(UniMod:4)YSAIIFETPLR	3	ALMTTVC(UniMod:4)YSAIIFETPLR3		13766.8	
B5DF55	B5DF55	B5DF55_RAT	Stam	Signal transducing adaptor molecule	1	ALMVEWTDEFK	ALMVEWTDEFK	2	ALMVEWTDEFK2	16342.2	17625.5	12899
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	ALMYIPQLGK	ALMYIPQLGK	2	ALMYIPQLGK2	13440.1	14973.4	14454.3
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	ALMYSEANRR	ALMYSEANRR	3	ALMYSEANRR3	40072.4	54728.9	43189.2
Q5FVF4	Q5FVF4	TM7S3_RAT	Tm7sf3	Transmembrane 7 superfamily member 3	1	ALNADFR	ALNADFR	2	ALNADFR2	19694.5	24353.7	26924.7
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	ALNAFGGEGVYAVAR	ALNAFGGEGVYAVAR	2	ALNAFGGEGVYAVAR2	265565	213842	208495
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	ALNAFGGEGVYAVAR	ALNAFGGEGVYAVAR	3	ALNAFGGEGVYAVAR3	41800.5	49242.8	28812.3
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	ALNAGYILNGLTVSIPGLEK	ALNAGYILNGLTVSIPGLEK	3	ALNAGYILNGLTVSIPGLEK3	14255.7	12735.3	16001.2
B1WBW4	B1WBW4	ARM10_RAT	Armc10	Armadillo repeat-containing protein 10	1	ALNALNNLSVNVENQTK	ALNALNNLSVNVENQTK	2	ALNALNNLSVNVENQTK2	16802.5	15555.6	12927.7
B1WBW4	B1WBW4	ARM10_RAT	Armc10	Armadillo repeat-containing protein 10	1	ALNALNNLSVNVENQTK	ALNALNNLSVNVENQTK	3	ALNALNNLSVNVENQTK3	14184	15667.3	9899.01
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	ALNANQEETGGVFLCPWK	ALNANQEETGGVFLC(UniMod:4)PWK	3	ALNANQEETGGVFLC(UniMod:4)PWK3	399134	377559	412359
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	ALNAPVLSVLK	ALNAPVLSVLK	2	ALNAPVLSVLK2	6722.3	10450.5	3237.02
D3ZM39	D3ZM39	D3ZM39_RAT	Dsg1	Desmoglein 1	1	ALNAQGQDLENPLELR	ALNAQGQDLENPLELR	2	ALNAQGQDLENPLELR2	1158.73		1399.17
D3Z7Z4	D3Z7Z4	D3Z7Z4_RAT	Lipt1	Lipoyltransferase 1	1	ALNAVQPQLDVQPTK	ALNAVQPQLDVQPTK	2	ALNAVQPQLDVQPTK2	3056.13	2011.86	
P00884	P00884	ALDOB_RAT	Aldob	Fructose-bisphosphate aldolase B	1	ALNDHHVYLEGTLLK	ALNDHHVYLEGTLLK	3	ALNDHHVYLEGTLLK3	4019.74		
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	ALNEACESVIQTACK	ALNEAC(UniMod:4)ESVIQTAC(UniMod:4)K	2	ALNEAC(UniMod:4)ESVIQTAC(UniMod:4)K2	3024.13	3878.62	4475.7
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	ALNEGGLQSIPK	ALNEGGLQSIPK	2	ALNEGGLQSIPK2	65177.2	68759.6	71508.1
A0A8I6APP3	A0A8I6APP3	A0A8I6APP3_RAT	Plekho2	Pleckstrin homology domain containing O2	1	ALNEGINR	ALNEGINR	2	ALNEGINR2	376746	406583	415000
A0A8I5ZUE7	A0A8I5ZUE7	A0A8I5ZUE7_RAT	Zc3h7b	Zinc finger CCCH-type containing 7B	1	ALNELGR	ALNELGR	2	ALNELGR2	11662.8	17167.7	15388
F7EUW3	F7EUW3	F7EUW3_RAT	C2cd2l	C2CD2-like	1	ALNEQACR	ALNEQAC(UniMod:4)R	2	ALNEQAC(UniMod:4)R2	96434.9	49811.9	78989.7
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	ALNFLVNEFLLK	ALNFLVNEFLLK	2	ALNFLVNEFLLK2	23097.7	18162.7	26575
Q6P791	Q6P791	LTOR1_RAT	Lamtor1	Ragulator complex protein LAMTOR1	1	ALNGAEPSYHSLPSAR	ALNGAEPSYHSLPSAR	2	ALNGAEPSYHSLPSAR2	5274.9	6844.78	3475.89
Q6P791	Q6P791	LTOR1_RAT	Lamtor1	Ragulator complex protein LAMTOR1	1	ALNGAEPSYHSLPSAR	ALNGAEPSYHSLPSAR	3	ALNGAEPSYHSLPSAR3	9477.86	11974.1	17145.4
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	ALNGDLVVVK	ALNGDLVVVK	2	ALNGDLVVVK2	28473	35208.9	30264.8
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	ALNGVSSPASSSPK	ALNGVSSPASSSPK	2	ALNGVSSPASSSPK2	15539.3	13234.7	14537.9
B2GV71	B2GV71	NDUF5_RAT	Ndufaf5	Arginine-hydroxylase NDUFAF5, mitochondrial	1	ALNIFDR	ALNIFDR	2	ALNIFDR2	6681.11	9333.62	12322
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	ALNLAYSSIYGSYR	ALNLAYSSIYGSYR	2	ALNLAYSSIYGSYR2	121810	131042	113841
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	ALNLAYSSIYGSYR	ALNLAYSSIYGSYR	3	ALNLAYSSIYGSYR3	18129	11654.8	18650.3
A0A8I5Y7Q0	A0A8I5Y7Q0	A0A8I5Y7Q0_RAT	Vps13b	Vacuolar protein sorting 13 homolog B	1	ALNLGILR	ALNLGILR	2	ALNLGILR2	6444.63	4497.28	3479.75
F1M1H0	F1M1H0	F1M1H0_RAT	Dera	deoxyribose-phosphate aldolase	1	ALNMHDEGITTAAVCVYPAR	ALNMHDEGITTAAVC(UniMod:4)VYPAR	3	ALNMHDEGITTAAVC(UniMod:4)VYPAR3	8685.99	3752.46	4656.37
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	ALNMSEFVCDR	ALNMSEFVC(UniMod:4)DR	2	ALNMSEFVC(UniMod:4)DR2	80524.8	92332.8	74360.3
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	ALNPLEEWLR	ALNPLEEWLR	2	ALNPLEEWLR2	72081.9	76374.8	60849.4
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	ALNPTVFK	ALNPTVFK	1	ALNPTVFK1	182598	102412	95638.7
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	ALNPTVFK	ALNPTVFK	2	ALNPTVFK2	1.85802e+07	1.51199e+07	1.45573e+07
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	ALNQLSVPLGQLR	ALNQLSVPLGQLR	2	ALNQLSVPLGQLR2	52510	38123.1	35215.7
Q9WTN5	Q9WTN5	TPC1_RAT	Tpcn1	Two pore calcium channel protein 1	1	ALNQSNTPLLSLK	ALNQSNTPLLSLK	2	ALNQSNTPLLSLK2	21912.7	24223.3	16098.1
Q07205	Q07205;A0A8I5ZMQ1	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	ALNRPPTYPTK	ALNRPPTYPTK	3	ALNRPPTYPTK3	235931	295941	280607
D3ZXD8	D3ZXD8	TM245_RAT	Tmem245	Transmembrane protein 245	1	ALNSAANNVYQYGR	ALNSAANNVYQYGR	2	ALNSAANNVYQYGR2	79409.4	96989.4	70681
D3ZXD8	D3ZXD8	TM245_RAT	Tmem245	Transmembrane protein 245	1	ALNSAANNVYQYGR	ALNSAANNVYQYGR	3	ALNSAANNVYQYGR3	9906.91	6810.3	16923.7
Q9R063	Q9R063	PRDX5_RAT	Prdx5	Peroxiredoxin-5, mitochondrial	1	ALNVEPDGTGLTCSLAPNILSQL	ALNVEPDGTGLTC(UniMod:4)SLAPNILSQL	3	ALNVEPDGTGLTC(UniMod:4)SLAPNILSQL3	27380.1	28062.4	25168.3
A0A0G2K189	A0A0G2K189	A0A0G2K189_RAT	Scrn3	Secernin 3	1	ALNVIVDLLGK	ALNVIVDLLGK	2	ALNVIVDLLGK2	8127.08	3460.09	5060.76
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	ALNVTLSSMGR	ALNVTLSSMGR	2	ALNVTLSSMGR2	20003.8	22432.3	17480.5
P23680	P23680	SAMP_RAT	Apcs	Serum amyloid P-component	1	ALNYEINGYVVIKPR	ALNYEINGYVVIKPR	3	ALNYEINGYVVIKPR3	10973	3571.13	4610.09
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	ALPALTTLDVSFNK	ALPALTTLDVSFNK	2	ALPALTTLDVSFNK2	1.4185e+07	1.67091e+07	1.36936e+07
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	ALPALTTLDVSFNK	ALPALTTLDVSFNK	3	ALPALTTLDVSFNK3	604572	667997	593015
Q6IN36	Q6IN36	WIPF1_RAT	Wipf1	WAS/WASL-interacting protein family member 1	1	ALPATPQLPSR	ALPATPQLPSR	2	ALPATPQLPSR2	863569	888544	836039
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	ALPDGSLWLER	ALPDGSLWLER	2	ALPDGSLWLER2	15116.7	16567.3	11039.9
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	ALPDMEVVGLNFSSATTPELLLK	ALPDMEVVGLNFSSATTPELLLK	3	ALPDMEVVGLNFSSATTPELLLK3	24805.1	41522.5	35552.1
B5DFF4	B5DFF4	B5DFF4_RAT	Vps37c	VPS37C subunit of ESCRT-I	1	ALPELAGDAPPK	ALPELAGDAPPK	2	ALPELAGDAPPK2	28776.2	21308.1	12098.3
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	ALPELTK	ALPELTK	2	ALPELTK2	56537.8	51060	42538.1
P85411	P85411	KTDAP_RAT	Krtdap	Keratinocyte differentiation-associated protein	1	ALPFINWEFFPK	ALPFINWEFFPK	2	ALPFINWEFFPK2	12665.1	24211.8	18670.3
D3ZUL1	D3ZUL1	D3ZUL1_RAT	Ccdc124	Coiled-coil domain containing 124	1	ALPFNAPK	ALPFNAPK	2	ALPFNAPK2	20468.7	14963.7	
P25113	P25113	PGAM1_RAT	Pgam1	Phosphoglycerate mutase 1	1	ALPFWNEEIVPQIK	ALPFWNEEIVPQIK	2	ALPFWNEEIVPQIK2	8634.32	12047.2	11555.7
P04906	P04906	GSTP1_RAT	Gstp1	Glutathione S-transferase P	1	ALPGHLKPFETLLSQNQGGK	ALPGHLKPFETLLSQNQGGK	3	ALPGHLKPFETLLSQNQGGK3	67140.5	60497.4	70446.9
P04906	P04906	GSTP1_RAT	Gstp1	Glutathione S-transferase P	1	ALPGHLKPFETLLSQNQGGK	ALPGHLKPFETLLSQNQGGK	4	ALPGHLKPFETLLSQNQGGK4	127367	103596	125496
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	ALPGMGTTIDVILINGR	ALPGMGTTIDVILINGR	2	ALPGMGTTIDVILINGR2	70876	52840.6	30177.4
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	ALPGMGTTIDVILINGR	ALPGMGTTIDVILINGR	3	ALPGMGTTIDVILINGR3	13306.9	7668.89	8901.59
O35370	O35370	O35370_RAT	Thbd	Thrombomodulin	1	ALPGTSEGHWTR	ALPGTSEGHWTR	2	ALPGTSEGHWTR2	116608	121451	115948
O35370	O35370	O35370_RAT	Thbd	Thrombomodulin	1	ALPGTSEGHWTR	ALPGTSEGHWTR	3	ALPGTSEGHWTR3	385391	348729	380843
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	ALPGVDPNDFSK	ALPGVDPNDFSK	2	ALPGVDPNDFSK2			3400.75
Q6P9U3	Q6P9U3	COMD3_RAT	Commd3	COMM domain-containing protein 3	1	ALPHITDVSWR	ALPHITDVSWR	3	ALPHITDVSWR3	11018	8185.09	13550.6
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	ALPILEELLR	ALPILEELLR	2	ALPILEELLR2	27457.7	39673.6	33282.4
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	ALPLFLHQVAETYFQEEDYEK	ALPLFLHQVAETYFQEEDYEK	3	ALPLFLHQVAETYFQEEDYEK3	60293.3	84306.7	69656.3
A0A8I6ANG1	A0A8I6ANG1	A0A8I6ANG1_RAT	Asb6	Ankyrin repeat and SOCS box-containing 6	1	ALPLPDR	ALPLPDR	2	ALPLPDR2	9107.09	3547.32	
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	ALPLVSAEAK	ALPLVSAEAK	2	ALPLVSAEAK2	21664.9	19128.8	12660.2
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	ALPLWLSLQYLGLDGIVGR	ALPLWLSLQYLGLDGIVGR	3	ALPLWLSLQYLGLDGIVGR3		8132.91	7545.17
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	ALPPALAALR	ALPPALAALR	2	ALPPALAALR2	52317.4	52671.2	55441.4
D3ZF97	D3ZF97	D3ZF97_RAT	Erlec1	Endoplasmic reticulum lectin	1	ALPQLSDDIPFR	ALPQLSDDIPFR	2	ALPQLSDDIPFR2	7148.04	4442.68	11568.6
Q9Z269	Q9Z269	VAPB_RAT	Vapb	Vesicle-associated membrane protein-associated protein B	1	ALPSNSPMAALAASGK	ALPSNSPMAALAASGK	2	ALPSNSPMAALAASGK2	111063	110590	129301
P20761	P20761	IGG2B_RAT	Igh-1a	Ig gamma-2B chain C region	1	ALPSPIEK	ALPSPIEK	1	ALPSPIEK1	62136.4	57016.6	64981.6
P20761	P20761	IGG2B_RAT	Igh-1a	Ig gamma-2B chain C region	1	ALPSPIEK	ALPSPIEK	2	ALPSPIEK2	6.12219e+06	5.6705e+06	5.92204e+06
D4A3A9	D4A3A9	D4A3A9_RAT	Galnt15	Polypeptide N-acetylgalactosaminyltransferase	1	ALPSPISPVR	ALPSPISPVR	2	ALPSPISPVR2	5303.52	8958.28	7803.33
A0A8I5Y8A9	A0A8I5Y8A9	A0A8I5Y8A9_RAT	Gltpd2	Glycolipid transfer protein domain containing 2	1	ALPSQIGPALRPLVVPEK	ALPSQIGPALRPLVVPEK	3	ALPSQIGPALRPLVVPEK3	7749.1	2928.7	8787.49
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	ALPSSEDLANFAPDLDK	ALPSSEDLANFAPDLDK	2	ALPSSEDLANFAPDLDK2	79106.4	97156.9	84910.6
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	ALPSSEDLANFAPDLDK	ALPSSEDLANFAPDLDK	3	ALPSSEDLANFAPDLDK3	8737.12	10560	7888.41
A0A0G2JUF2	A0A0G2JUF2	A0A0G2JUF2_RAT	Snx30	Sorting nexin family member 30	1	ALPSTGPQSLR	ALPSTGPQSLR	2	ALPSTGPQSLR2	35114.4	23518.3	25919.7
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	ALPSTTPEATQDQPMMDR	ALPSTTPEATQDQPMMDR	3	ALPSTTPEATQDQPMMDR3	12953.9	10740.9	5211.91
A0A8I5ZUT2	A0A8I5ZUT2	A0A8I5ZUT2_RAT	Irgq	Immunity-related GTPase Q	1	ALPTAQAGALLLALPPASPR	ALPTAQAGALLLALPPASPR	3	ALPTAQAGALLLALPPASPR3	11253.6	17814.1	10365.8
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	ALPTMEAHQVIK	ALPTMEAHQVIK	2	ALPTMEAHQVIK2	9049.73	7894.6	
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	ALPTMEAHQVIK	ALPTMEAHQVIK	3	ALPTMEAHQVIK3	33599.3	24386.1	36721.4
A0A0G2K1N9	A0A0G2K1N9	A0A0G2K1N9_RAT	Selenoo	Selenoprotein O	1	ALPVETPPPGPEDSLSTPRPVPGACFSR	ALPVETPPPGPEDSLSTPRPVPGAC(UniMod:4)FSR	3	ALPVETPPPGPEDSLSTPRPVPGAC(UniMod:4)FSR3	13619.7	16680.6	20481.9
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	ALPVLVVK	ALPVLVVK	2	ALPVLVVK2	6242.63	3531.93	
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	ALPVSYEK	ALPVSYEK	1	ALPVSYEK1	57072.2	36049.4	30149.9
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	ALPVSYEK	ALPVSYEK	2	ALPVSYEK2	3.40965e+06	2.34366e+06	2.53935e+06
D3Z9G1	D3Z9G1	D3Z9G1_RAT	Fbxw17	F-box and WD-40 domain protein 17	1	ALPVVLGTQTWR	ALPVVLGTQTWR	2	ALPVVLGTQTWR2	6374.61	10124.8	7823.11
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	ALQAELSQVR	ALQAELSQVR	2	ALQAELSQVR2	49436.9	49891.2	38163.6
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	ALQAQLR	ALQAQLR	2	ALQAQLR2			32650.4
P05065	Q6AY07;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	ALQASALK	ALQASALK	1	ALQASALK1	12167.1	4854.05	5409.81
P05065	Q6AY07;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	ALQASALK	ALQASALK	2	ALQASALK2		594495	574508
P09117	P09117	ALDOC_RAT	Aldoc	Fructose-bisphosphate aldolase C	1	ALQASALSAWR	ALQASALSAWR	2	ALQASALSAWR2	9269.21	11204.2	11283
P14562	P14562	LAMP1_RAT	Lamp1	Lysosome-associated membrane glycoprotein 1	1	ALQASVGNSYK	ALQASVGNSYK	2	ALQASVGNSYK2	213768	236630	232312
P35053	P35053	GPC1_RAT	Gpc1	Glypican-1	1	ALQATLATQLHGIDDHFQR	ALQATLATQLHGIDDHFQR	3	ALQATLATQLHGIDDHFQR3	7656.06	6388.98	4620.23
P35053	P35053	GPC1_RAT	Gpc1	Glypican-1	1	ALQATLATQLHGIDDHFQR	ALQATLATQLHGIDDHFQR	4	ALQATLATQLHGIDDHFQR4	21919	21149.6	13955.7
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	ALQDGDLASSR	ALQDGDLASSR	2	ALQDGDLASSR2	55329.4	61876	50673.5
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	ALQDLVDLLDTGQEK	ALQDLVDLLDTGQEK	2	ALQDLVDLLDTGQEK2			5690.59
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	ALQDMSSTAPPAPLQPSIR	ALQDMSSTAPPAPLQPSIR	3	ALQDMSSTAPPAPLQPSIR3	10950.9	3867.64	
Q6P752	Q6P752	TOIP2_RAT	Tor1aip2	Torsin-1A-interacting protein 2	1	ALQDSDTVK	ALQDSDTVK	2	ALQDSDTVK2	37974.2	30307.8	33558.8
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	ALQDVQIR	ALQDVQIR	2	ALQDVQIR2	25896.7	72553.9	20271.8
Q29RW1	P12847;Q29RW1	MYH4_RAT	Myh4	Myosin-4	0	ALQEAHQQTLDDLQAEEDK	ALQEAHQQTLDDLQAEEDK	3	ALQEAHQQTLDDLQAEEDK3	9477.1	12022.3	10242.1
O88436	O88436	PAX4_RAT	Pax4	Paired box protein Pax-4	1	ALQEDQR	ALQEDQR	2	ALQEDQR2	44697.5		38964.5
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	ALQEFSELNER	ALQEFSELNER	2	ALQEFSELNER2	18630.2	33860.8	38082.9
A0A8I5Y9V4	A0A8I5Y9V4	A0A8I5Y9V4_RAT	Cars1	cysteine--tRNA ligase	1	ALQEGEGDLSISADR	ALQEGEGDLSISADR	2	ALQEGEGDLSISADR2	2303.88		2442.31
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	ALQEVEQSK	ALQEVEQSK	2	ALQEVEQSK2	18200	14282.6	11953.8
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	ALQEWCR	ALQEWC(UniMod:4)R	2	ALQEWC(UniMod:4)R2	6725.39	5783.48	5235.35
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	ALQEYAAK	ALQEYAAK	1	ALQEYAAK1	1587.84	5045.82	3125.13
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	ALQEYAAK	ALQEYAAK	2	ALQEYAAK2	256741	242367	303333
F7ELS2	F7ELS2;A0A8I6GM53	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	0	ALQFLEQVK	ALQFLEQVK	2	ALQFLEQVK2	172051	164146	165328
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	ALQFLQLQDGR	ALQFLQLQDGR	2	ALQFLQLQDGR2	3.58982e+06	3.84922e+06	3.99991e+06
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	ALQFLQLQDGR	ALQFLQLQDGR	3	ALQFLQLQDGR3	49681.6	45174.1	61615.6
A0A8I5ZSB0	A0A8I5ZSB0	A0A8I5ZSB0_RAT	Igtp	Interferon gamma induced GTPase	1	ALQFQDLIK	ALQFQDLIK	2	ALQFQDLIK2	8573.45		8766.66
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	ALQGASQIIAEIR	ALQGASQIIAEIR	2	ALQGASQIIAEIR2	38524.3	34139.7	35692.6
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	ALQGASQIIAEIR	ALQGASQIIAEIR	3	ALQGASQIIAEIR3	7905.18	9492.99	8138.75
P62944	P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	ALQHMTDFAIQFNK	ALQHMTDFAIQFNK	2	ALQHMTDFAIQFNK2	2396.53	6016.76	
P62944	P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	ALQHMTDFAIQFNK	ALQHMTDFAIQFNK	3	ALQHMTDFAIQFNK3	38767.7	44175.8	32137.5
F1M3G7	F1M3G7	AKP13_RAT	Akap13	A-kinase anchor protein 13	1	ALQHSNSPDTPSACLQTETK	ALQHSNSPDTPSAC(UniMod:4)LQTETK	3	ALQHSNSPDTPSAC(UniMod:4)LQTETK3	3923.09	6288.35	5541.96
Q5XHY7	Q5XHY7	STAM2_RAT	Stam2	Signal transducing adapter molecule 2	1	ALQILQSIDPK	ALQILQSIDPK	2	ALQILQSIDPK2	11668.8	11621.1	12579.1
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	ALQIPEVYLR	ALQIPEVYLR	2	ALQIPEVYLR2	118765	142542	154760
Q63369	Q63369	NFKB1_RAT	Nfkb1	Nuclear factor NF-kappa-B p105 subunit	1	ALQLAKR	ALQLAKR	2	ALQLAKR2	39687.3	73933.6	53552.5
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	ALQLEVQK	ALQLEVQK	2	ALQLEVQK2	25692.2	26892.1	17055.9
P23965	P23965	ECI1_RAT	Eci1	Enoyl-CoA delta isomerase 1, mitochondrial	1	ALQLGTLFPPAEALK	ALQLGTLFPPAEALK	2	ALQLGTLFPPAEALK2	171849	154889	151441
P23965	P23965	ECI1_RAT	Eci1	Enoyl-CoA delta isomerase 1, mitochondrial	1	ALQLGTLFPPAEALK	ALQLGTLFPPAEALK	3	ALQLGTLFPPAEALK3	13202.6	17555.4	18530.4
D4A529	D4A529	D4A529_RAT	She	Src homology 2 domain containing E	1	ALQLLDGPCEPGETMK	ALQLLDGPC(UniMod:4)EPGETMK	2	ALQLLDGPC(UniMod:4)EPGETMK2	36057.2	46996	32098.1
D4A529	D4A529	D4A529_RAT	She	Src homology 2 domain containing E	1	ALQLLDGPCEPGETMK	ALQLLDGPC(UniMod:4)EPGETMK	3	ALQLLDGPC(UniMod:4)EPGETMK3	13357	11555.1	20364.5
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	ALQLLHCFPLDTR	ALQLLHC(UniMod:4)FPLDTR	3	ALQLLHC(UniMod:4)FPLDTR3	8922.68	11125.7	4094.77
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	ALQLLYDLR	ALQLLYDLR	2	ALQLLYDLR2	25979.8	27520.5	27465.1
A0A8I6ABQ2	A0A8I6ABQ2	A0A8I6ABQ2_RAT	Bcl2l13	BCL2 like 13	1	ALQMILSQPVTYEAYR	ALQMILSQPVTYEAYR	2	ALQMILSQPVTYEAYR2	21393	18521.8	24583.6
A0A8I6ABQ2	A0A8I6ABQ2	A0A8I6ABQ2_RAT	Bcl2l13	BCL2 like 13	1	ALQMILSQPVTYEAYR	ALQMILSQPVTYEAYR	3	ALQMILSQPVTYEAYR3	4579.57	3807.64	9228.76
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	ALQNAVSTFVNR	ALQNAVSTFVNR	2	ALQNAVSTFVNR2	13166.1	25005	26930.4
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	ALQNAVSTFVNR	ALQNAVSTFVNR	3	ALQNAVSTFVNR3	9531.97	13783.3	11163.1
Q704S8	Q704S8	CACP_RAT	Crat	Carnitine O-acetyltransferase	1	ALQPIVSEEEWAHTK	ALQPIVSEEEWAHTK	3	ALQPIVSEEEWAHTK3	17892.1	13393.8	26344.5
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	ALQPLEEGESEEK	ALQPLEEGESEEK	2	ALQPLEEGESEEK2	334648	270650	323762
Q66H43	Q66H43	BORC6_RAT	Borcs6	BLOC-1-related complex subunit 6	1	ALQPVQGLAR	ALQPVQGLAR	2	ALQPVQGLAR2	38330.6	37517.5	42491.2
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	ALQQCGQLQK	ALQQC(UniMod:4)GQLQK	2	ALQQC(UniMod:4)GQLQK2	21468.7	18141.5	26970.5
A0A8I6AHX5	A0A8I6AHX5	A0A8I6AHX5_RAT	Aven	Apoptosis and caspase activation inhibitor	1	ALQQLPLAVR	ALQQLPLAVR	2	ALQQLPLAVR2	7489.25	5215.63	8408.48
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	ALQQPLEQLAR	ALQQPLEQLAR	2	ALQQPLEQLAR2	8875.22		9805.34
D3ZG75	D3ZG75	D3ZG75_RAT	Als2cl	ALS2 C-terminal like	1	ALQQYLR	ALQQYLR	2	ALQQYLR2	271637	248047	305359
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	ALQQYTLEPSEKPFDLK	ALQQYTLEPSEKPFDLK	3	ALQQYTLEPSEKPFDLK3	68381.1	100663	88145
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	ALQSLACGKPTQR	ALQSLAC(UniMod:4)GKPTQR	3	ALQSLAC(UniMod:4)GKPTQR3	34219.5	32588.2	25420.1
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	ALQSVALGLR	ALQSVALGLR	2	ALQSVALGLR2	72067.8	78023.1	74692.9
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	ALQSVGQIVGEVLK	ALQSVGQIVGEVLK	2	ALQSVGQIVGEVLK2	97883.4	85042.2	77796.9
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	ALQSVGQIVGEVLK	ALQSVGQIVGEVLK	3	ALQSVGQIVGEVLK3	30317.3	16238.8	23485.6
G3V8G2	G3V8G2	G3V8G2_RAT	Psmd5	26S proteasome non-ATPase regulatory subunit 5	1	ALQSVVQAVPLHELR	ALQSVVQAVPLHELR	2	ALQSVVQAVPLHELR2	7416.28	2639.21	5712.76
G3V8G2	G3V8G2	G3V8G2_RAT	Psmd5	26S proteasome non-ATPase regulatory subunit 5	1	ALQSVVQAVPLHELR	ALQSVVQAVPLHELR	3	ALQSVVQAVPLHELR3	21075	29450.2	40336.1
Q811U3	Q8K3M6;Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	0	ALQTVIEMK	ALQTVIEMK	2	ALQTVIEMK2	2237.7	5179.83	2835.85
G3V6R4	G3V6R4	G3V6R4_RAT	Lrrc1	Leucine rich repeat containing 1	1	ALQVADFSGNPLTR	ALQVADFSGNPLTR	2	ALQVADFSGNPLTR2	20939.1	16779.1	14709.2
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	ALQVGCLLR	ALQVGC(UniMod:4)LLR	2	ALQVGC(UniMod:4)LLR2	60301.6	51330.2	56671.8
Q9JL55	Q9JL55	GDE1_RAT	Gde1	Glycerophosphodiester phosphodiesterase 1	1	ALQVLKPR	ALQVLKPR	2	ALQVLKPR2	10149.1	10078.4	7115.63
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	ALQVLVDQSK	ALQVLVDQSK	2	ALQVLVDQSK2	22222.1	23943.9	21771.8
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	ALQWHPDKNPDNK	ALQWHPDKNPDNK	2	ALQWHPDKNPDNK2	7372.11	5988.16	4407.52
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	ALQWHPDKNPDNK	ALQWHPDKNPDNK	3	ALQWHPDKNPDNK3	192508	167860	160682
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	ALQWHPDKNPDNKEFAEK	ALQWHPDKNPDNKEFAEK	3	ALQWHPDKNPDNKEFAEK3	19584.3	12596	5717.98
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	ALQWHPDKNPDNKEFAEK	ALQWHPDKNPDNKEFAEK	4	ALQWHPDKNPDNKEFAEK4	81266	68305.6	64585.1
Q4V8B7	Q4V8B7	HSDL1_RAT	Hsdl1	Inactive hydroxysteroid dehydrogenase-like protein 1	1	ALQYEYASK	ALQYEYASK	2	ALQYEYASK2	161708	185279	151707
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	ALQYLETIPESEPSGVNR	ALQYLETIPESEPSGVNR	3	ALQYLETIPESEPSGVNR3	11438.2	11758.6	13296.1
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	ALRDFALQNPGVVPR	ALRDFALQNPGVVPR	2	ALRDFALQNPGVVPR2		1829.03	1873.36
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	ALRDFALQNPGVVPR	ALRDFALQNPGVVPR	3	ALRDFALQNPGVVPR3	142401	287947	282128
D3ZZC5	D3ZZC5	D3ZZC5_RAT	Tradd	Tumor necrosis factor receptor type 1-associated DEATH domain protein	1	ALRDPALDSLAYEYER	ALRDPALDSLAYEYER	3	ALRDPALDSLAYEYER3	10872.6	12422.1	11353.4
Q62918	Q62918	NELL2_RAT	Nell2	Protein kinase C-binding protein NELL2	1	ALREDNAYCEDIDECAEGR	ALREDNAYC(UniMod:4)EDIDEC(UniMod:4)AEGR	3	ALREDNAYC(UniMod:4)EDIDEC(UniMod:4)AEGR3	1624.98	2378.83	
O88788	O88788	AG10B_RAT	Alg10b	Putative Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase	1	ALREPYMDEIFHLPQAQR	ALREPYMDEIFHLPQAQR	3	ALREPYMDEIFHLPQAQR3		4838.35	2057.54
O88788	O88788	AG10B_RAT	Alg10b	Putative Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase	1	ALREPYMDEIFHLPQAQR	ALREPYMDEIFHLPQAQR	4	ALREPYMDEIFHLPQAQR4	10812.9	5305.12	3452.53
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	ALRETLPAEQDLTTK	ALRETLPAEQDLTTK	3	ALRETLPAEQDLTTK3	19802.6	42616.5	62727.5
D3ZBE5	D3ZBE5	NEK7_RAT	Nek7	Serine/threonine-protein kinase Nek7	1	ALRPDMGYNTLANFR	ALRPDMGYNTLANFR	3	ALRPDMGYNTLANFR3	1898.96	5065.87	3886.66
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	ALRPPDPQAAFSYEETAK	ALRPPDPQAAFSYEETAK	3	ALRPPDPQAAFSYEETAK3	4620.28	12752.9	12234.7
D3ZZV1	D3ZZV1;Q6EIX2	D3ZZV1_RAT	Pam16	Presequence translocase associated motor 16	0	ALRQEFAASQAAADAR	ALRQEFAASQAAADAR	3	ALRQEFAASQAAADAR3	2406.08		9369.9
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	ALSADQGSYR	ALSADQGSYR	2	ALSADQGSYR2	18209.8	20745.9	18070.3
O70467	O70467	ANM3_RAT	Prmt3	Protein arginine N-methyltransferase 3	1	ALSAEAALAR	ALSAEAALAR	2	ALSAEAALAR2	24040.8	27965	17954
Q68FP9	Q68FP9	COG6_RAT	Cog6	Conserved oligomeric Golgi complex subunit 6	1	ALSAFFVENSLR	ALSAFFVENSLR	2	ALSAFFVENSLR2	33578	39272.6	40493.2
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	ALSAIADLLTSEHER	ALSAIADLLTSEHER	2	ALSAIADLLTSEHER2	8564.85	3987.03	2631.86
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	ALSAIADLLTSEHER	ALSAIADLLTSEHER	3	ALSAIADLLTSEHER3	32382.9	45743.4	60528.1
Q5M7T7	Q5M7T7	Q5M7T7_RAT	Pla2g7	Phospholipase A2 group VII	1	ALSAILDIEHGNPK	ALSAILDIEHGNPK	2	ALSAILDIEHGNPK2	19015.2	12619.4	15502.7
Q5M7T7	Q5M7T7	Q5M7T7_RAT	Pla2g7	Phospholipase A2 group VII	1	ALSAILDIEHGNPK	ALSAILDIEHGNPK	3	ALSAILDIEHGNPK3	74028.9	59039.3	62715.7
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	ALSAPENAK	ALSAPENAK	1	ALSAPENAK1	204314	234026	162247
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	ALSAPENAK	ALSAPENAK	2	ALSAPENAK2	36492.1	48239.9	38670.5
P14046	A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	ALSCLESSWENIEQGGNGSFVYTK	ALSC(UniMod:4)LESSWENIEQGGNGSFVYTK	3	ALSC(UniMod:4)LESSWENIEQGGNGSFVYTK3	16681.3	19864	16735.3
P05065	P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	1	ALSDHHVYLEGTLLKPNMVTPGHACTQK	ALSDHHVYLEGTLLKPNMVTPGHAC(UniMod:4)TQK	4	ALSDHHVYLEGTLLKPNMVTPGHAC(UniMod:4)TQK4	53922.8	59457.1	48022.7
D3ZI35	D3ZI35;D3ZP12	D3ZI35_RAT	Cep135	Centrosomal protein 135	0	ALSDLRR	ALSDLRR	2	ALSDLRR2	28048.9	16090.6	36622.1
Q01827	Q01827	VMAT2_RAT	Slc18a2	Synaptic vesicular amine transporter	1	ALSDLVLLR	ALSDLVLLR	2	ALSDLVLLR2	99340	86048.5	93947.7
Q498R1	Q498R1	MTRR_RAT	Mtrr	Methionine synthase reductase	1	ALSDYTSDATEK	ALSDYTSDATEK	2	ALSDYTSDATEK2	3272.27	3505.63	7220.3
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	ALSEFGSK	ALSEFGSK	2	ALSEFGSK2	143768	159716	128015
M0RBL7	M0RBL7	M0RBL7_RAT	Tcaf2c	Protein FAM115C-like	1	ALSEFQAMVNHK	ALSEFQAMVNHK	3	ALSEFQAMVNHK3		9853.87	4808.15
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	ALSEIAGITLPYDTLDQVR	ALSEIAGITLPYDTLDQVR	3	ALSEIAGITLPYDTLDQVR3	9619.09	7494.88	6956.56
Q63787	Q63787	P85A_RAT	Pik3r1	Phosphatidylinositol 3-kinase regulatory subunit alpha	1	ALSEIFSHVLFR	ALSEIFSHVLFR	3	ALSEIFSHVLFR3	20203.9	8469.47	14006.8
Q62871	Q62871	DC1I2_RAT	Dync1i2	Cytoplasmic dynein 1 intermediate chain 2	1	ALSEQINIFFDYSGR	ALSEQINIFFDYSGR	2	ALSEQINIFFDYSGR2			2182.95
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	ALSETACEDSEENK	ALSETAC(UniMod:4)EDSEENK	2	ALSETAC(UniMod:4)EDSEENK2	4447.79	2629.31	3409.65
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	ALSETACEDSEENKQR	ALSETAC(UniMod:4)EDSEENKQR	3	ALSETAC(UniMod:4)EDSEENKQR3	24903.5	17727.2	20535.8
D4A758	D4A758	D4A758_RAT	Lrrc8b	Leucine rich repeat containing 8 VRAC subunit B	1	ALSETVAEQSVR	ALSETVAEQSVR	2	ALSETVAEQSVR2		1320.43	
D4A758	D4A758	D4A758_RAT	Lrrc8b	Leucine rich repeat containing 8 VRAC subunit B	1	ALSETVAEQSVRPLK	ALSETVAEQSVRPLK	3	ALSETVAEQSVRPLK3	22800.7	20202.4	19529.1
Q4V8I7	Q4V8I7	LRC8A_RAT	Lrrc8a	Volume-regulated anion channel subunit LRRC8A	1	ALSETVVEESDPKPAFSK	ALSETVVEESDPKPAFSK	3	ALSETVVEESDPKPAFSK3	16135.8	18816.4	11620.7
Q498T9	Q498T9	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	1	ALSEVSGEDSEEK	ALSEVSGEDSEEK	2	ALSEVSGEDSEEK2	12758.3	11879.4	16521.9
A0A0G2JUC9	A0A0G2JUC9	A0A0G2JUC9_RAT	Herc2	HECT-type E3 ubiquitin transferase	1	ALSFTGSALAALVK	ALSFTGSALAALVK	2	ALSFTGSALAALVK2	1563.27		2449.37
D3ZE26	D3ZE26	D3ZE26_RAT	Tmcc2	Transmembrane and coiled-coil domain family 2	1	ALSGSATLVSSPK	ALSGSATLVSSPK	2	ALSGSATLVSSPK2	15357.3	17698.7	14589.7
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	ALSGYCGFMAANLYAR	ALSGYC(UniMod:4)GFMAANLYAR	2	ALSGYC(UniMod:4)GFMAANLYAR2	54272.1	58912.3	32274.9
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	ALSGYCGFMAANLYAR	ALSGYC(UniMod:4)GFMAANLYAR	3	ALSGYC(UniMod:4)GFMAANLYAR3			11262.1
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	ALSIEADDNGCFPLDGHVLCR	ALSIEADDNGC(UniMod:4)FPLDGHVLC(UniMod:4)R	3	ALSIEADDNGC(UniMod:4)FPLDGHVLC(UniMod:4)R3	578948	495879	472825
A0A8I6ANL9	A0A8I6ANL9	A0A8I6ANL9_RAT	Cdc23	Cell division cycle 23	1	ALSIFNELRK	ALSIFNELRK	3	ALSIFNELRK3	24493.3	25344.3	17371.6
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	ALSLECK	ALSLEC(UniMod:4)K	2	ALSLEC(UniMod:4)K2	33726.2	45339	30993.8
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	ALSLEGQQLIENR	ALSLEGQQLIENR	2	ALSLEGQQLIENR2	25629.4	22024.8	21552.2
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	ALSLSVALPR	ALSLSVALPR	2	ALSLSVALPR2	19177	21026.2	20147.7
P24594	P24594	IBP5_RAT	Igfbp5	Insulin-like growth factor-binding protein 5	1	ALSMCPPSPLGCELVK	ALSMC(UniMod:4)PPSPLGC(UniMod:4)ELVK	2	ALSMC(UniMod:4)PPSPLGC(UniMod:4)ELVK2	181905	180243	138421
P24594	P24594	IBP5_RAT	Igfbp5	Insulin-like growth factor-binding protein 5	1	ALSMCPPSPLGCELVK	ALSMC(UniMod:4)PPSPLGC(UniMod:4)ELVK	3	ALSMC(UniMod:4)PPSPLGC(UniMod:4)ELVK3	12945.9	21512.6	19247.5
Q63488	Q63488	S20A2_RAT	Slc20a2	Sodium-dependent phosphate transporter 2	1	ALSMTHGSAK	ALSMTHGSAK	2	ALSMTHGSAK2		8880.73	
D4A3P1	D4A3P1	D4A3P1_RAT	Ubqln4	Ubiquilin 4	1	ALSNLESVPGGYNALR	ALSNLESVPGGYNALR	2	ALSNLESVPGGYNALR2	7262.3	5128.46	
Q91XU8	Q91XU8	CDS2_RAT	Cds2	Phosphatidate cytidylyltransferase 2	1	ALSNLSSR	ALSNLSSR	2	ALSNLSSR2	374345	387120	386973
P50115	P50115	S10A8_RAT	S100a8	Protein S100-A8	1	ALSNVIEVYHNYSGIK	ALSNVIEVYHNYSGIK	3	ALSNVIEVYHNYSGIK3	16616.3	18861.8	19025.4
Q66HR0	Q66HR0	S12A9_RAT	Slc12a9	Solute carrier family 12 member 9	1	ALSPQDYVATVADALK	ALSPQDYVATVADALK	2	ALSPQDYVATVADALK2	5648.09	8882.87	
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	ALSQGQSVK	ALSQGQSVK	1	ALSQGQSVK1	5174.51	3106.97	1036.16
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	ALSQGQSVK	ALSQGQSVK	2	ALSQGQSVK2	281312	278723	298511
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	ALSQGQSVKYLLPEAVITYIR	ALSQGQSVKYLLPEAVITYIR	4	ALSQGQSVKYLLPEAVITYIR4	13313.8	23926.9	13885.6
Q99N27	Q99N27;A0A8I6A678	SNX1_RAT	Snx1	Sorting nexin-1	0	ALSQLAEVEEK	ALSQLAEVEEK	2	ALSQLAEVEEK2	287172	284638	270787
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	ALSSAGQHVVR	ALSSAGQHVVR	2	ALSSAGQHVVR2	15938.6	14618	23402.3
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	ALSSEGKPYVTK	ALSSEGKPYVTK	2	ALSSEGKPYVTK2	75221.5	63467.7	63462.2
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	ALSSEGKPYVTK	ALSSEGKPYVTK	3	ALSSEGKPYVTK3	1.25361e+06	1.33114e+06	1.49047e+06
B5DFI9	B5DFI9	B5DFI9_RAT	Pdk3	Protein-serine/threonine kinase	1	ALSSESFER	ALSSESFER	2	ALSSESFER2	26550.2	32440.3	22463.3
Q4KM35	Q4KM35	PSB10_RAT	Psmb10	Proteasome subunit beta type-10	1	ALSSPIEPVQR	ALSSPIEPVQR	2	ALSSPIEPVQR2	1.94316e+06	1.8172e+06	1.89196e+06
Q4KM35	Q4KM35	PSB10_RAT	Psmb10	Proteasome subunit beta type-10	1	ALSSPIEPVQR	ALSSPIEPVQR	3	ALSSPIEPVQR3	10910	14199.4	20997.5
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	ALSSQHQAR	ALSSQHQAR	2	ALSSQHQAR2			20663.3
Q8CGU4	Q8CGU4	AGAP2_RAT	Agap2	Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2	1	ALSTDCTPSGDLSPLSR	ALSTDC(UniMod:4)TPSGDLSPLSR	2	ALSTDC(UniMod:4)TPSGDLSPLSR2	6098.36	5842.58	3018.14
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ALSTDPAAPNLK	ALSTDPAAPNLK	2	ALSTDPAAPNLK2	4.11065e+06	4.02933e+06	3.98218e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ALSTDPAAPNLK	ALSTDPAAPNLK	3	ALSTDPAAPNLK3	7159	5881.45	
P10111	A0A8I6A3L4;P10111;A0A8I6A629	PPIA_RAT	Ppia	Peptidyl-prolyl cis-trans isomerase A	0	ALSTGEK	ALSTGEK	1	ALSTGEK1			19653.7
G3V6R7	G3V6R7	G3V6R7_RAT	Oxsm	3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial	1	ALSTNPDPK	ALSTNPDPK	2	ALSTNPDPK2	14787.7	15437.3	24683.3
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	ALSTPYIHSLAPLVVGK	ALSTPYIHSLAPLVVGK	3	ALSTPYIHSLAPLVVGK3	13247	17823.3	18827.8
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	ALSVAELTQQMFDAR	ALSVAELTQQMFDAR	2	ALSVAELTQQMFDAR2	4.77869e+06	13672.1	6988.2
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	ALSVAELTQQMFDAR	ALSVAELTQQMFDAR	3	ALSVAELTQQMFDAR3	1.22305e+06	1.3283e+06	1.60606e+06
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	ALSVAVAGSGSCR	ALSVAVAGSGSC(UniMod:4)R	2	ALSVAVAGSGSC(UniMod:4)R2	34965.5	30572.7	36304
Q641Y1	Q641Y1	C56D2_RAT	Cyb561d2	Transmembrane reductase CYB561D2	1	ALSVETESHIYR	ALSVETESHIYR	2	ALSVETESHIYR2	4861.06		
Q641Y1	Q641Y1	C56D2_RAT	Cyb561d2	Transmembrane reductase CYB561D2	1	ALSVETESHIYR	ALSVETESHIYR	3	ALSVETESHIYR3	12420.1	17699	17281.2
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	ALSVGLVR	ALSVGLVR	2	ALSVGLVR2	277477	269631	272665
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	ALSVLGCGHTSSTK	ALSVLGC(UniMod:4)GHTSSTK	2	ALSVLGC(UniMod:4)GHTSSTK2	7692.15	7112.11	7654.77
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	ALSVLGCGHTSSTK	ALSVLGC(UniMod:4)GHTSSTK	3	ALSVLGC(UniMod:4)GHTSSTK3	89521.1	91705.2	83189.2
D4A529	D4A529	D4A529_RAT	She	Src homology 2 domain containing E	1	ALSVQFEGSDR	ALSVQFEGSDR	2	ALSVQFEGSDR2	22289.7	25799.5	29823.5
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	ALSVVLEQDGVQTLK	ALSVVLEQDGVQTLK	2	ALSVVLEQDGVQTLK2	10995.4	14522.2	11209.3
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	ALSVVSTVVR	ALSVVSTVVR	2	ALSVVSTVVR2	18881.3	18866.3	18142.7
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	ALSWLGSVIGYSDGLRR	ALSWLGSVIGYSDGLRR	3	ALSWLGSVIGYSDGLRR3	21496.3	7561.06	12936.6
A0A8I5ZNG4	A0A8I5ZNG4	A0A8I5ZNG4_RAT	Rictor	RPTOR independent companion of MTOR, complex 2	1	ALSYASLDKEDLLSPINQNTLQR	ALSYASLDKEDLLSPINQNTLQR	3	ALSYASLDKEDLLSPINQNTLQR3	2755.08	2134.12	3186.06
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	ALTAEIVK	ALTAEIVK	2	ALTAEIVK2	53424.3	45773.7	60460.7
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	ALTAIPK	ALTAIPK	1	ALTAIPK1	124518	64944.7	61841
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	ALTAIPKDEK	ALTAIPKDEK	2	ALTAIPKDEK2	139816	136918	136123
Q568Z3	Q568Z3	Q568Z3_RAT	Paqr4	Progestin and adipoQ receptor family member 4	1	ALTAPSTSAR	ALTAPSTSAR	2	ALTAPSTSAR2	51418.9	59171.1	59664.9
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	ALTASSSETEHSCAAMAASER	ALTASSSETEHSC(UniMod:4)AAMAASER	3	ALTASSSETEHSC(UniMod:4)AAMAASER3	24244.2	25049.7	12360.6
Q62991	Q62991	SCFD1_RAT	Scfd1	Sec1 family domain-containing protein 1	1	ALTDAGCNLSPLQYIK	ALTDAGC(UniMod:4)NLSPLQYIK	2	ALTDAGC(UniMod:4)NLSPLQYIK2	13722.7	8126.71	9561.28
D3ZYI0	D3ZYI0	D3ZYI0_RAT	Gca	Grancalcin	1	ALTDFFR	ALTDFFR	2	ALTDFFR2	96310.2	114643	90169.2
A0A8I5Y9M9	A0A8I5Y9M9	A0A8I5Y9M9_RAT	Sri	Sorcin	1	ALTDSFR	ALTDSFR	2	ALTDSFR2	309059	310899	290784
O88902	O88902	PTN23_RAT	Ptpn23	Tyrosine-protein phosphatase non-receptor type 23 (Fragment)	1	ALTEANVQYAAVR	ALTEANVQYAAVR	2	ALTEANVQYAAVR2	4041.34	4076.32	3360.92
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	ALTEGLSMR	ALTEGLSMR	2	ALTEGLSMR2	64727.8	68964.5	68078.9
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	ALTELFFVTENR	ALTELFFVTENR	2	ALTELFFVTENR2	6774.54	9565.25	8026.42
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	ALTEPVQSTSLIGILTR	ALTEPVQSTSLIGILTR	2	ALTEPVQSTSLIGILTR2	6441.84	17729.8	
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	ALTFLLLQPPSPK	ALTFLLLQPPSPK	2	ALTFLLLQPPSPK2	18296.7	20744.8	24664.5
Q6P6R2	Q6P6R2	DLDH_RAT	Dld	Dihydrolipoyl dehydrogenase, mitochondrial	1	ALTGGIAHLFK	ALTGGIAHLFK	2	ALTGGIAHLFK2	40068.6	26692.2	32444.1
P51111	P51111	HD_RAT	Htt	Huntingtin	1	ALTGNTFSLVDCIPLLQK	ALTGNTFSLVDC(UniMod:4)IPLLQK	3	ALTGNTFSLVDC(UniMod:4)IPLLQK3	5212.02	6190.99	4569.04
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	ALTIHDTK	ALTIHDTK	2	ALTIHDTK2	9574.36		6540.62
D4A7X9	D4A7X9	D4A7X9_RAT	Myo1f	Myosin IF	1	ALTISIGDGLPK	ALTISIGDGLPK	2	ALTISIGDGLPK2		675.966	
Q4KM35	Q4KM35	PSB10_RAT	Psmb10	Proteasome subunit beta type-10	1	ALTLELLEETVQAMEVE	ALTLELLEETVQAMEVE	3	ALTLELLEETVQAMEVE3		11785.8	22869.4
B1WBW4	B1WBW4	ARM10_RAT	Armc10	Armadillo repeat-containing protein 10	1	ALTLFQNINNCLR	ALTLFQNINNC(UniMod:4)LR	2	ALTLFQNINNC(UniMod:4)LR2	12726		19785
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	ALTLGALTLPLAR	ALTLGALTLPLAR	2	ALTLGALTLPLAR2	421316	329134	495167
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	ALTLGALTLPLAR	ALTLGALTLPLAR	3	ALTLGALTLPLAR3	15457.2	14700.2	18265
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	ALTLIAGSPLK	ALTLIAGSPLK	2	ALTLIAGSPLK2	177574	194320	196398
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	ALTLPGSSENEYIMK	ALTLPGSSENEYIMK	2	ALTLPGSSENEYIMK2	14965.2	18920.6	15038.6
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	ALTLQDLDNIWAAQAGK	ALTLQDLDNIWAAQAGK	2	ALTLQDLDNIWAAQAGK2	20581.7	12725.6	24894.6
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	ALTLQDLDNIWAAQAGK	ALTLQDLDNIWAAQAGK	3	ALTLQDLDNIWAAQAGK3	29020.4	32600.2	41475
Q5U2R9	Q5U2R9	Q5U2R9_RAT	Scfd2	Sec1 family domain containing 2	1	ALTNHCGLLQLGMATVQTLK	ALTNHC(UniMod:4)GLLQLGMATVQTLK	3	ALTNHC(UniMod:4)GLLQLGMATVQTLK3	13026	9095.26	6895.98
Q920P0	Q920P0	DCXR_RAT	Dcxr	L-xylulose reductase	1	ALTNHTVYCSTK	ALTNHTVYC(UniMod:4)STK	2	ALTNHTVYC(UniMod:4)STK2	1065.02		
Q920P0	Q920P0	DCXR_RAT	Dcxr	L-xylulose reductase	1	ALTNHTVYCSTK	ALTNHTVYC(UniMod:4)STK	3	ALTNHTVYC(UniMod:4)STK3	19258	18423.2	16814.7
A1L1K3	A1L1K3	APC5_RAT	Anapc5	Anaphase-promoting complex subunit 5	1	ALTPASLQK	ALTPASLQK	2	ALTPASLQK2	9984.51	14803.2	13684.5
A0A8I6APP3	A0A8I6APP3	A0A8I6APP3_RAT	Plekho2	Pleckstrin homology domain containing O2	1	ALTPLSESSEANSESQEDAETLAK	ALTPLSESSEANSESQEDAETLAK	3	ALTPLSESSEANSESQEDAETLAK3	18886	19040.8	22239.5
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	ALTPPADPPR	ALTPPADPPR	2	ALTPPADPPR2	341854	287656	313438
Q5PPK9	Q5PPK9	EIPR1_RAT	Eipr1	EARP and GARP complex-interacting protein 1	1	ALTPQTAETDAIR	ALTPQTAETDAIR	2	ALTPQTAETDAIR2	29137.4	27788.8	23248.7
A0A8I6ATU9	A0A8I6ATU9	A0A8I6ATU9_RAT	Atxn2	Ataxin 2	1	ALTPSIEAK	ALTPSIEAK	2	ALTPSIEAK2	4905.61	8521.14	10743
P98105	P98105	LYAM2_RAT	Sele	E-selectin	1	ALTQPAHGVR	ALTQPAHGVR	2	ALTQPAHGVR2	10683.3		4820.47
Q6VBQ5	Q6VBQ5	MYADM_RAT	Myadm	Myeloid-associated differentiation marker	1	ALTQPLGLLR	ALTQPLGLLR	2	ALTQPLGLLR2	369699	358287	390818
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	ALTQTGGPHVK	ALTQTGGPHVK	2	ALTQTGGPHVK2	807732	634425	503415
O35763	O35763	MOES_RAT	Msn	Moesin	1	ALTSELANAR	ALTSELANAR	2	ALTSELANAR2	223659	223152	221819
O35763	O35763	MOES_RAT	Msn	Moesin	1	ALTSELANARDESK	ALTSELANARDESK	3	ALTSELANARDESK3	43489.3	62227.3	59747.9
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	ALTSFER	ALTSFER	2	ALTSFER2	160764	178431	167203
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	ALTSQLTDEELAQGR	ALTSQLTDEELAQGR	2	ALTSQLTDEELAQGR2	26629.3	22807.5	23511.7
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	ALTSQLTDEELAQGR	ALTSQLTDEELAQGR	3	ALTSQLTDEELAQGR3	8899.77	4678.36	4825.04
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	ALTTKPSSLDQFK	ALTTKPSSLDQFK	2	ALTTKPSSLDQFK2	3806		
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	ALTTKPSSLDQFK	ALTTKPSSLDQFK	3	ALTTKPSSLDQFK3	42917.6	42875.1	53406.4
A0A8I5Y9M9	A0A8I5Y9M9;A0A8I6A618	A0A8I5Y9M9_RAT	Sri	Sorcin	0	ALTTMGFR	ALTTMGFR	2	ALTTMGFR2	380619	372188	423479
P24155	P24155	THOP1_RAT	Thop1	Thimet oligopeptidase	1	ALTTQLIEQTK	ALTTQLIEQTK	2	ALTTQLIEQTK2	11055.7	12717.2	15983.3
Q6P9T8	Q4QRB4;Q6P9T8;B4F7C2;Q4QQV0	TBB4B_RAT	Tubb4b	Tubulin beta-4B chain	0	ALTVPELTQQMFDAK	ALTVPELTQQMFDAK	2	ALTVPELTQQMFDAK2	4.896e+06	4.92372e+06	5.26254e+06
Q6P9T8	Q4QRB4;Q6P9T8;B4F7C2;Q4QQV0	TBB4B_RAT	Tubb4b	Tubulin beta-4B chain	0	ALTVPELTQQMFDAK	ALTVPELTQQMFDAK	3	ALTVPELTQQMFDAK3	846561	791681	930137
P85108	P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	ALTVPELTQQMFDSK	ALTVPELTQQMFDSK	2	ALTVPELTQQMFDSK2	6.21345e+06	6.31174e+06	7.21698e+06
P85108	P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	ALTVPELTQQMFDSK	ALTVPELTQQMFDSK	3	ALTVPELTQQMFDSK3	1.65404e+06	1.64289e+06	1.80404e+06
P69897	P69897	TBB5_RAT	Tubb5	Tubulin beta-5 chain	1	ALTVPELTQQVFDAK	ALTVPELTQQVFDAK	2	ALTVPELTQQVFDAK2	7.01671e+06	7.20225e+06	7.38621e+06
P69897	P69897	TBB5_RAT	Tubb5	Tubulin beta-5 chain	1	ALTVPELTQQVFDAK	ALTVPELTQQVFDAK	3	ALTVPELTQQVFDAK3	1.6281e+06	1.58961e+06	1.80552e+06
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	ALTYDEK	ALTYDEK	1	ALTYDEK1	1445.34	1502.64	1219.38
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	ALTYDEK	ALTYDEK	2	ALTYDEK2	48353.3	55103.5	48253.6
P10818	P10818	CX6A1_RAT	Cox6a1	Cytochrome c oxidase subunit 6A1, mitochondrial	1	ALTYFVALPGVGVSMLNVFLK	ALTYFVALPGVGVSMLNVFLK	3	ALTYFVALPGVGVSMLNVFLK3		14321	4129.87
P02770	P02770	ALBU_RAT	Alb	Albumin	1	ALVAAVR	ALVAAVR	1	ALVAAVR1	43727.9	25251.2	
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	ALVADSHPESER	ALVADSHPESER	2	ALVADSHPESER2	108336	87405.2	99050.9
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	ALVADSHPESER	ALVADSHPESER	3	ALVADSHPESER3	2.30412e+06	2.72464e+06	2.8975e+06
Q5BJT7	Q5BJT7	CCD93_RAT	Ccdc93	Coiled-coil domain-containing protein 93	1	ALVAMNESLK	ALVAMNESLK	2	ALVAMNESLK2	11377.7	12505.8	11151.1
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	ALVAQVIK	ALVAQVIK	2	ALVAQVIK2	30492.8	27190.7	17749.5
D3ZQ30	D3ZQ30	D3ZQ30_RAT	Telo2	Telomere length regulation protein TEL2 homolog	1	ALVAVTVTDPEQVAK	ALVAVTVTDPEQVAK	2	ALVAVTVTDPEQVAK2	12697	11269.9	7818.18
P62250	A0A8I5XVG9;M0R8S7;P62250;M0R4I3;A0A8I5YCD9;A0A8I5ZY61	RS16_RAT	Rps16	Small ribosomal subunit protein uS9	0	ALVAYYQK	ALVAYYQK	2	ALVAYYQK2	44165.2	33800.9	47670.7
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	ALVCLAK	ALVC(UniMod:4)LAK	2	ALVC(UniMod:4)LAK2	282113	251999	249013
A0JN30	A0JN30	A0JN30_RAT	Cnpy2	Canopy FGF signaling regulator 2	1	ALVDELEWEIAR	ALVDELEWEIAR	2	ALVDELEWEIAR2	51190.3	43194.2	61799.3
Q9JI03	Q9JI03	CO5A1_RAT	Col5a1	Collagen alpha-1(V) chain	1	ALVDGCATK	ALVDGC(UniMod:4)ATK	2	ALVDGC(UniMod:4)ATK2	84519.6	69738	75244.2
Q63507	Q6TUH8;A0A8I6AL87;D3ZHE6;Q63507	RL14_RAT	Rpl14	Large ribosomal subunit protein eL14	0	ALVDGPCTR	ALVDGPC(UniMod:4)TR	2	ALVDGPC(UniMod:4)TR2	75434.4	79913.5	67053.8
O08651	O08651	SERA_RAT	Phgdh	D-3-phosphoglycerate dehydrogenase	1	ALVDHENVISCPHLGASTK	ALVDHENVISC(UniMod:4)PHLGASTK	3	ALVDHENVISC(UniMod:4)PHLGASTK3	9077.9	4307.03	1788.71
O08651	O08651	SERA_RAT	Phgdh	D-3-phosphoglycerate dehydrogenase	1	ALVDHENVISCPHLGASTK	ALVDHENVISC(UniMod:4)PHLGASTK	4	ALVDHENVISC(UniMod:4)PHLGASTK4	13429.2		
P28840	P28840	NEC1_RAT	Pcsk1	Neuroendocrine convertase 1	1	ALVDLADPR	ALVDLADPR	2	ALVDLADPR2	25173.9	22487.8	17504.9
Q4V7F2	Q4V7F2	CREL1_RAT	Creld1	Protein disulfide isomerase Creld1	1	ALVDSFNK	ALVDSFNK	2	ALVDSFNK2	89906.7	83862.6	81748.3
Q6XQN1	Q6XQN1	PNCB_RAT	Naprt	Nicotinate phosphoribosyltransferase	1	ALVDSLSAR	ALVDSLSAR	2	ALVDSLSAR2	8796.95		
A0A8I6A6I4	A0A8I6A6I4	A0A8I6A6I4_RAT	Atp11b	Phospholipid-transporting ATPase	1	ALVEAAAR	ALVEAAAR	2	ALVEAAAR2	27406.9	25541.6	19769.5
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	ALVEAAEEATR	ALVEAAEEATR	2	ALVEAAEEATR2	13800.1	13076.7	8958.67
A0A0G2JWA3	A0A0G2JWA3	A0A0G2JWA3_RAT	Xpo7	Exportin 7	1	ALVEFTNSPDCLSK	ALVEFTNSPDC(UniMod:4)LSK	2	ALVEFTNSPDC(UniMod:4)LSK2	105138	106969	134254
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	ALVEGGGILSR	ALVEGGGILSR	2	ALVEGGGILSR2	11694.1	14698.8	10927.1
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	ALVEGPLNNLR	ALVEGPLNNLR	2	ALVEGPLNNLR2	26061.1	18866.5	32522.4
P08650	P08650	CO5_RAT	C5	Complement C5	1	ALVEGVDQLLTDYQIK	ALVEGVDQLLTDYQIK	2	ALVEGVDQLLTDYQIK2	66074.7	41666.3	49143.6
P08650	P08650	CO5_RAT	C5	Complement C5	1	ALVEGVDQLLTDYQIK	ALVEGVDQLLTDYQIK	3	ALVEGVDQLLTDYQIK3	20150.2	16665.1	18854.8
M0R4M1	M0R4M1	M0R4M1_RAT	Nlrc5	NLR family, CARD domain containing 5	1	ALVELFQK	ALVELFQK	2	ALVELFQK2	10270.9	12392.9	7489.21
A0A0G2K0W3	A0A0G2K0W3	A0A0G2K0W3_RAT	Ttyh3	Protein tweety homolog	1	ALVEMQDVVAELLK	ALVEMQDVVAELLK	2	ALVEMQDVVAELLK2	24171.6	18748.2	23630.3
A0A0G2K0W3	A0A0G2K0W3	A0A0G2K0W3_RAT	Ttyh3	Protein tweety homolog	1	ALVEMQDVVAELLK	ALVEMQDVVAELLK	3	ALVEMQDVVAELLK3	8459.56	11588.2	9505.85
A0A0G2K0G9	A0A0G2K0G9	A0A0G2K0G9_RAT	Rin3	Ras and Rab interactor 3	1	ALVEPTLHSEEELEAIVESALYK	ALVEPTLHSEEELEAIVESALYK	3	ALVEPTLHSEEELEAIVESALYK3	2958.75		
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	ALVEQLLSLLSSSPGPPTRK	ALVEQLLSLLSSSPGPPTRK	3	ALVEQLLSLLSSSPGPPTRK3	5440.87	8410.72	6311.04
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	ALVEQMEK	ALVEQMEK	2	ALVEQMEK2	46297.8	46502.2	48618.1
B2GV94	B2GV94	B2GV94_RAT	Retreg3	Fam134c protein	1	ALVEVLGPYEPLLSR	ALVEVLGPYEPLLSR	2	ALVEVLGPYEPLLSR2	30698.8	23820.8	35231.9
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	ALVEYVR	ALVEYVR	2	ALVEYVR2	9946.24		
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	ALVEYVRPLLR	ALVEYVRPLLR	3	ALVEYVRPLLR3	53067.8	54835.2	65437
P47858	P47858	PFKAM_RAT	Pfkm	ATP-dependent 6-phosphofructokinase, muscle type	1	ALVFQPVTELK	ALVFQPVTELK	2	ALVFQPVTELK2	36339.9	31617.5	32790.5
P47858	P47858	PFKAM_RAT	Pfkm	ATP-dependent 6-phosphofructokinase, muscle type	1	ALVFQPVTELKDQTDFEHR	ALVFQPVTELKDQTDFEHR	4	ALVFQPVTELKDQTDFEHR4	26971	30625	43968.4
A0A8I5ZU41	A0A8I5YBI0;A0A8I6AIH1;P00689;A0A8I5ZU41	A0A8I5ZU41_RAT	Amy1	Alpha-amylase	0	ALVFVDNHDNQR	ALVFVDNHDNQR	3	ALVFVDNHDNQR3	18386		21987.3
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	ALVGAVHVLHASR	ALVGAVHVLHASR	3	ALVGAVHVLHASR3	191514	201406	146615
A0A8I5ZS17	A0A8I5ZS17	A0A8I5ZS17_RAT	Snx25	Sorting nexin 25	1	ALVGFWESVEHLK	ALVGFWESVEHLK	3	ALVGFWESVEHLK3	4109.3	4138.55	5392.65
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	ALVGGAVGGLAGAASK	ALVGGAVGGLAGAASK	2	ALVGGAVGGLAGAASK2	98334.4	91377.6	97826.5
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	ALVGGAVGGLAGAASK	ALVGGAVGGLAGAASK	3	ALVGGAVGGLAGAASK3	109769	82002.9	90910.5
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	ALVGLCK	ALVGLC(UniMod:4)K	2	ALVGLC(UniMod:4)K2	34873.6	18679	24575.9
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	ALVGSENPPLTVIR	ALVGSENPPLTVIR	2	ALVGSENPPLTVIR2	127986	129171	140315
Q4KLZ6	Q4KLZ6	TKFC_RAT	Tkfc	Triokinase/FMN cyclase	1	ALVGTFMSALEMR	ALVGTFMSALEMR	2	ALVGTFMSALEMR2	6879.82		3800.58
D3ZSI8	D3ZSI8	PI51A_RAT	Pip5k1a	Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha	1	ALVHDGDTVSVHRPGFYAER	ALVHDGDTVSVHRPGFYAER	4	ALVHDGDTVSVHRPGFYAER4	7776.07	9802.07	
Q63798	Q63798	PSME2_RAT	Psme2	Proteasome activator complex subunit 2	1	ALVHERDEAAYGALR	ALVHERDEAAYGALR	3	ALVHERDEAAYGALR3	21726.7	26130.1	9300.9
Q63798	Q63798	PSME2_RAT	Psme2	Proteasome activator complex subunit 2	1	ALVHERDEAAYGALR	ALVHERDEAAYGALR	4	ALVHERDEAAYGALR4	55658.6	81331.2	73516.7
A0A8I6A0B7	A0A8I6A0B7	A0A8I6A0B7_RAT	Nipsnap3a	Nipsnap homolog 3B	1	ALVHPVCPSFATDHR	ALVHPVC(UniMod:4)PSFATDHR	3	ALVHPVC(UniMod:4)PSFATDHR3	14446		6862.09
D3ZHZ3	D3ZHZ3	D3ZHZ3_RAT	Osbpl3	Oxysterol-binding protein	1	ALVHQLSNESR	ALVHQLSNESR	2	ALVHQLSNESR2	2489.28	2705.24	4594.78
D3ZHZ3	D3ZHZ3	D3ZHZ3_RAT	Osbpl3	Oxysterol-binding protein	1	ALVHQLSNESR	ALVHQLSNESR	3	ALVHQLSNESR3	10041.2	10330.7	9894.5
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	ALVIAHNNIEMAK	ALVIAHNNIEMAK	2	ALVIAHNNIEMAK2	2420.11	2139.46	
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	ALVIAHNNIEMAK	ALVIAHNNIEMAK	3	ALVIAHNNIEMAK3	83361	84779	85456.5
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	ALVITHFVHVAEK	ALVITHFVHVAEK	3	ALVITHFVHVAEK3	171681	195703	149755
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	ALVITNSAR	ALVITNSAR	2	ALVITNSAR2	76664	64043.4	83511.4
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	ALVLAQIR	ALVLAQIR	2	ALVLAQIR2	19090.1	10415.7	17308.5
O08773	O08773	RGS14_RAT	Rgs14	Regulator of G-protein signaling 14	1	ALVLDQDCTVLADQEVR	ALVLDQDC(UniMod:4)TVLADQEVR	2	ALVLDQDC(UniMod:4)TVLADQEVR2	10008	5295.41	6266.89
O08773	O08773	RGS14_RAT	Rgs14	Regulator of G-protein signaling 14	1	ALVLDQDCTVLADQEVR	ALVLDQDC(UniMod:4)TVLADQEVR	3	ALVLDQDC(UniMod:4)TVLADQEVR3	8018.2		
O88959	O88959	INHBE_RAT	Inhbe	Inhibin beta E chain	1	ALVLELAK	ALVLELAK	2	ALVLELAK2	76014.6	61102.1	65567.6
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	ALVLELCCNDESGEDVEVPYVR	ALVLELC(UniMod:4)C(UniMod:4)NDESGEDVEVPYVR	3	ALVLELC(UniMod:4)C(UniMod:4)NDESGEDVEVPYVR3	13791	9320.03	8033.81
Q499P8	Q499P8	RUSF1_RAT	Rusf1	RUS family member 1	1	ALVLETLNESR	ALVLETLNESR	2	ALVLETLNESR2	22628.8	11462.8	12057.8
D3ZQI6	D3ZQI6	D3ZQI6_RAT	Xpo4	Exportin 4	1	ALVLGGFAHMDTETK	ALVLGGFAHMDTETK	3	ALVLGGFAHMDTETK3	17589.3	30496.5	25103.7
Q6MG59	Q6MG59	G6B_RAT	Mpig6b	Megakaryocyte and platelet inhibitory receptor G6b	1	ALVLQLLPLLLSK	ALVLQLLPLLLSK	2	ALVLQLLPLLLSK2		4573.53	3867.48
F1LQP9	F1LQP9;D3ZER6	F1LQP9_RAT	Tnpo1	Transportin 1	0	ALVMLLEVR	ALVMLLEVR	2	ALVMLLEVR2	9151.62	6015.36	7812.49
Q32Q55	Q32Q55	Q32Q55_RAT	Ces2h	Carboxylic ester hydrolase	1	ALVNCLR	ALVNC(UniMod:4)LR	2	ALVNC(UniMod:4)LR2	10052.8	11428.4	11109.3
Q5XIT9	Q5XIT9	MCCB_RAT	Mccc2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	1	ALVNQLHER	ALVNQLHER	2	ALVNQLHER2	2587.97		
P30427	P30427	PLEC_RAT	Plec	Plectin	1	ALVPAAELLDSGVISHEVYQQLQR	ALVPAAELLDSGVISHEVYQQLQR	3	ALVPAAELLDSGVISHEVYQQLQR3		14371.1	4584.9
B2RZC0	B2RZC0	B2RZC0_RAT	Aig1	Aig1 protein	1	ALVPCQVLR	ALVPC(UniMod:4)QVLR	2	ALVPC(UniMod:4)QVLR2	28176.9	28866.6	24170.7
A0A8I5Y5Z6	A0A8I5Y5Z6	A0A8I5Y5Z6_RAT	Xrcc4	X-ray repair cross complementing 4	1	ALVPESGAAGAYK	ALVPESGAAGAYK	2	ALVPESGAAGAYK2	20271.9	22759.9	20804.6
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	ALVPMFVR	ALVPMFVR	2	ALVPMFVR2	97456.3	86467.1	92846.9
D3ZRC4	D3ZRC4	PLPL8_RAT	Pnpla8	Calcium-independent phospholipase A2-gamma	1	ALVQALR	ALVQALR	2	ALVQALR2	21217	21509.7	22928
B2RYN3	B2RYN3	B2RYN3_RAT	Eef1e1	Eukaryotic translation elongation factor 1 epsilon 1	1	ALVQQWLEFR	ALVQQWLEFR	2	ALVQQWLEFR2	34344	39348	33528.8
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	ALVQTQDHLQLFLQQLAGK	ALVQTQDHLQLFLQQLAGK	3	ALVQTQDHLQLFLQQLAGK3	49880.5	25259.5	33489.4
D4A0T9	D4A0T9	D4A0T9_RAT	Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	1	ALVRPPASVPCLIADCAYR	ALVRPPASVPC(UniMod:4)LIADC(UniMod:4)AYR	3	ALVRPPASVPC(UniMod:4)LIADC(UniMod:4)AYR3	5966.6	6132.4	
P97532	P97532	THTM_RAT	Mpst	3-mercaptopyruvate sulfurtransferase	1	ALVSAQWVAEALK	ALVSAQWVAEALK	2	ALVSAQWVAEALK2	16073	16888.1	22458.9
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	ALVSEEGEGKNPVDYIQGLLDLK	ALVSEEGEGKNPVDYIQGLLDLK	3	ALVSEEGEGKNPVDYIQGLLDLK3	10621.5	11640.7	10369.2
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	ALVSEWK	ALVSEWK	2	ALVSEWK2	56563.3	52904.5	22165.5
D3ZJI7	D3ZJI7	D3ZJI7_RAT	Serpinb11	Serpin family B member 11	1	ALVSHINQQNSLSIANR	ALVSHINQQNSLSIANR	3	ALVSHINQQNSLSIANR3	3714.09		6527.22
Q5XII0	Q5XII0	EPDR1_RAT	Epdr1	Mammalian ependymin-related protein 1	1	ALVSYDGLNQR	ALVSYDGLNQR	2	ALVSYDGLNQR2	11669.2	11948.3	10029.3
B1WBW4	B1WBW4	ARM10_RAT	Armc10	Armadillo repeat-containing protein 10	1	ALVTLGNNAAFSTNQAIIR	ALVTLGNNAAFSTNQAIIR	3	ALVTLGNNAAFSTNQAIIR3	8277.25	6944.47	9299.96
D3Z9K5	D3Z9K5	D3Z9K5_RAT	Wfikkn2	WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2	1	ALVTVDEVLKDEK	ALVTVDEVLKDEK	3	ALVTVDEVLKDEK3	10887.8	2550.79	4662.06
Q5CZZ9	Q5CZZ9	PI51B_RAT	Pip5k1b	Phosphatidylinositol 4-phosphate 5-kinase type-1 beta	1	ALVYDGDTVSVHRPSFYADR	ALVYDGDTVSVHRPSFYADR	3	ALVYDGDTVSVHRPSFYADR3	5862.18	5373.52	7184.48
Q5CZZ9	Q5CZZ9	PI51B_RAT	Pip5k1b	Phosphatidylinositol 4-phosphate 5-kinase type-1 beta	1	ALVYDGDTVSVHRPSFYADR	ALVYDGDTVSVHRPSFYADR	4	ALVYDGDTVSVHRPSFYADR4	18640.5	9218.7	15485.3
Q9Z311	Q9Z311	MECR_RAT	Mecr	Enoyl-[acyl-carrier-protein] reductase, mitochondrial	1	ALVYGNHGDPAK	ALVYGNHGDPAK	2	ALVYGNHGDPAK2	910.374	2523.05	
Q9Z311	Q9Z311	MECR_RAT	Mecr	Enoyl-[acyl-carrier-protein] reductase, mitochondrial	1	ALVYGNHGDPAK	ALVYGNHGDPAK	3	ALVYGNHGDPAK3	13541.2	15434.1	6922.29
A0A0G2K7U7	A0A0G2K7U7	A0A0G2K7U7_RAT	Ankrd27	Ankyrin repeat domain 27	1	ALVYYDVQACR	ALVYYDVQAC(UniMod:4)R	2	ALVYYDVQAC(UniMod:4)R2		4610.14	
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	ALWAASR	ALWAASR	2	ALWAASR2	77327.9	102464	81450.4
D4ADT7	D4ADT7	D4ADT7_RAT	Nod1	Nucleotide-binding oligomerization domain containing 1	1	ALWAHLFASLR	ALWAHLFASLR	3	ALWAHLFASLR3	5418.35	3294.99	3851.81
Q5XIG8	Q5XIG8	STRAP_RAT	Strap	Serine-threonine kinase receptor-associated protein	1	ALWCSEDK	ALWC(UniMod:4)SEDK	2	ALWC(UniMod:4)SEDK2	65810.7	58274.4	69155.8
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	ALWDDSGIQNAYDR	ALWDDSGIQNAYDR	2	ALWDDSGIQNAYDR2	37974.7	33514.1	42308
Q5U2R9	Q5U2R9	Q5U2R9_RAT	Scfd2	Sec1 family domain containing 2	1	ALWEALLNTK	ALWEALLNTK	2	ALWEALLNTK2	12561.6	13346.4	14169.3
Q63803	Q63803	GNAS1_RAT	Gnas	Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas	1	ALWEDEGVR	ALWEDEGVR	2	ALWEDEGVR2	116258	114347	121329
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	ALWEIEVVHHDPCR	ALWEIEVVHHDPC(UniMod:4)R	4	ALWEIEVVHHDPC(UniMod:4)R4	3276.26	3969.4	2673.03
A0A8I6AEI3	A0A8I6AEI3	A0A8I6AEI3_RAT	Wwox	WW domain-containing oxidoreductase	1	ALWELSER	ALWELSER	2	ALWELSER2	9894.54	8623.73	8107.37
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	ALWEVEVVQHDPCR	ALWEVEVVQHDPC(UniMod:4)R	2	ALWEVEVVQHDPC(UniMod:4)R2	4393.29	4904.31	5841.2
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	ALWEVEVVQHDPCR	ALWEVEVVQHDPC(UniMod:4)R	3	ALWEVEVVQHDPC(UniMod:4)R3	68441	61098.6	65779.7
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	ALWHLSCDVADGK	ALWHLSC(UniMod:4)DVADGK	3	ALWHLSC(UniMod:4)DVADGK3	21219.7	11735.5	25551
D3ZWS0	D3ZWS0	D3ZWS0_RAT	Scrib	Scribble planar cell polarity protein	1	ALWLAENQAQPMLR	ALWLAENQAQPMLR	2	ALWLAENQAQPMLR2	2031.26	6694.58	5742.43
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	ALWLPMGD	ALWLPMGD	1	ALWLPMGD1	26798.5	31134.4	26111.4
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	ALYALMEK	ALYALMEK	2	ALYALMEK2	84892.2	79723.4	77565.9
G3V7E6	G3V7E6	G3V7E6_RAT	Pcm1	Pericentriolar material 1	1	ALYALQDIVSR	ALYALQDIVSR	2	ALYALQDIVSR2	11110.8	13100.9	10292.9
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	ALYAVFSR	ALYAVFSR	2	ALYAVFSR2	75571.7	67647.5	84410
D3Z8E6	D3Z8E6	CAMP1_RAT	Camsap1	Calmodulin-regulated spectrin-associated protein 1	1	ALYCYQPDTEEIYK	ALYC(UniMod:4)YQPDTEEIYK	2	ALYC(UniMod:4)YQPDTEEIYK2	778.095		
O35964	O35964	SH3G1_RAT	Sh3gl1	Endophilin-A2	1	ALYDFEPENDGELGFR	ALYDFEPENDGELGFR	2	ALYDFEPENDGELGFR2	50045.9	52984	61390.2
O35964	O35964	SH3G1_RAT	Sh3gl1	Endophilin-A2	1	ALYDFEPENDGELGFR	ALYDFEPENDGELGFR	3	ALYDFEPENDGELGFR3	6543.46	8753.87	3968.05
D4A3X7	D4A3X7	D4A3X7_RAT	Snx33	Sorting nexin	1	ALYDFHSENK	ALYDFHSENK	3	ALYDFHSENK3	11214.4	9406.84	7722.43
Q501W1	Q501W1	Q501W1_RAT	Txk	Tyrosine-protein kinase	1	ALYDFLPR	ALYDFLPR	2	ALYDFLPR2	10096.2	4197.71	7370.02
P20909	P20909	COBA1_RAT	Col11a1	Collagen alpha-1(XI) chain	1	ALYDGCASR	ALYDGC(UniMod:4)ASR	2	ALYDGC(UniMod:4)ASR2	21850.6	19126.1	12701.2
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	ALYDNHPDCSDELAFSR	ALYDNHPDC(UniMod:4)SDELAFSR	3	ALYDNHPDC(UniMod:4)SDELAFSR3	221550	206289	231840
Q9EPH8	D4A233;D3ZSR2;Q9EPH8;G3V9N0	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	0	ALYDTFSAFGNILSCK	ALYDTFSAFGNILSC(UniMod:4)K	2	ALYDTFSAFGNILSC(UniMod:4)K2	22608.2	14578.9	35026.7
Q9EPH8	D4A233;D3ZSR2;Q9EPH8;G3V9N0	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	0	ALYDTFSAFGNILSCK	ALYDTFSAFGNILSC(UniMod:4)K	3	ALYDTFSAFGNILSC(UniMod:4)K3	2624.25		
Q9QY17	Q9QY17	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	1	ALYDYEGQEHDELSFK	ALYDYEGQEHDELSFK	2	ALYDYEGQEHDELSFK2	7373.41	7454.74	
Q9QY17	Q9QY17	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	1	ALYDYEGQEHDELSFK	ALYDYEGQEHDELSFK	3	ALYDYEGQEHDELSFK3	107435	94314.1	99035.6
P07150	P07150	ANXA1_RAT	Anxa1	Annexin A1	1	ALYEAGER	ALYEAGER	2	ALYEAGER2	5595.03	7594.36	
P05369	P05369	FPPS_RAT	Fdps	Farnesyl pyrophosphate synthase	1	ALYEELDLR	ALYEELDLR	2	ALYEELDLR2	47325	54012	63814.5
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	ALYEHLTAK	ALYEHLTAK	2	ALYEHLTAK2	3557.68	1775.8	2295.22
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	ALYEQSLHIK	ALYEQSLHIK	2	ALYEQSLHIK2	20689.8	22428.8	17665.4
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	ALYEQSLHIK	ALYEQSLHIK	3	ALYEQSLHIK3	118943	129262	144123
F7FA09	F7FA09	F7FA09_RAT	Pex11b	Peroxisomal biogenesis factor 11 beta	1	ALYFACDNVLWAGK	ALYFAC(UniMod:4)DNVLWAGK	2	ALYFAC(UniMod:4)DNVLWAGK2	2257.06	2788.56	
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	ALYFCGFPTLK	ALYFC(UniMod:4)GFPTLK	2	ALYFC(UniMod:4)GFPTLK2	9101.75	8122	20290.5
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	ALYFISPTPK	ALYFISPTPK	2	ALYFISPTPK2	71406.3	82923.8	81606.3
Q5XIT9	Q5XIT9	MCCB_RAT	Mccc2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	1	ALYGDTLVTGFAR	ALYGDTLVTGFAR	2	ALYGDTLVTGFAR2	15194.7	19679.6	16589.2
A0A8I6A5X2	A0A8I6A5X2	A0A8I6A5X2_RAT	Usp32	ubiquitinyl hydrolase 1	1	ALYHWYGSNLALPR	ALYHWYGSNLALPR	3	ALYHWYGSNLALPR3	55563.9	67523.9	61268.9
A0A8I6AAF1	A0A8I6AAF1	A0A8I6AAF1_RAT	Card19	Caspase recruitment domain family, member 19	1	ALYIHAQPLHSHLPSR	ALYIHAQPLHSHLPSR	4	ALYIHAQPLHSHLPSR4	17764.6	12710.2	17165.1
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	ALYIQANNCVEAK	ALYIQANNC(UniMod:4)VEAK	2	ALYIQANNC(UniMod:4)VEAK2	187686	189016	192134
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	ALYIVHPTMFIK	ALYIVHPTMFIK	3	ALYIVHPTMFIK3	12939.4	23678.7	23995.2
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	ALYLEPSDGVSPTQETGEAQSQDDER	ALYLEPSDGVSPTQETGEAQSQDDER	3	ALYLEPSDGVSPTQETGEAQSQDDER3	5268.18	4016.04	
D4A8F2	D4A8F2	D4A8F2_RAT	Rsu1	Ras suppressor protein 1	1	ALYLSDNDFEILPPDIGK	ALYLSDNDFEILPPDIGK	3	ALYLSDNDFEILPPDIGK3	12608.8	26188.7	28004.3
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	ALYNETESLLVGR	ALYNETESLLVGR	2	ALYNETESLLVGR2	78905.3	92861.3	96102
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	ALYNETESLLVGR	ALYNETESLLVGR	3	ALYNETESLLVGR3	22602.3	15307.5	14784.3
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ALYNQYIHFK	ALYNQYIHFK	2	ALYNQYIHFK2	7458.2	3267.31	6331.85
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ALYNQYIHFK	ALYNQYIHFK	3	ALYNQYIHFK3	28574.8	28107.1	34709.4
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	ALYPFEAR	ALYPFEAR	2	ALYPFEAR2	31088.8	22312.4	29490.3
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	ALYPFESR	ALYPFESR	2	ALYPFESR2	37283	46325.4	48179.8
P05544	P05544	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	1	ALYQAEAFIADFK	ALYQAEAFIADFK	2	ALYQAEAFIADFK2	1.10667e+06	966426	977073
P05544	P05544	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	1	ALYQAEAFIADFK	ALYQAEAFIADFK	3	ALYQAEAFIADFK3	98185.4	82250.2	112218
P05544	P05544	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	1	ALYQAEAFIADFKQPNEAK	ALYQAEAFIADFKQPNEAK	3	ALYQAEAFIADFKQPNEAK3	377178	452697	517830
P05544	P05544	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	1	ALYQAEAFIADFKQPNEAK	ALYQAEAFIADFKQPNEAK	4	ALYQAEAFIADFKQPNEAK4			1.27835e+06
P05544	P05544	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	1	ALYQAEAFIADFKQPNEAKK	ALYQAEAFIADFKQPNEAKK	4	ALYQAEAFIADFKQPNEAKK4	33559.4	47209.3	35000.4
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	ALYQAEAFTADFQQSR	ALYQAEAFTADFQQSR	2	ALYQAEAFTADFQQSR2	515325	402198	537058
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	ALYQAEAFTADFQQSR	ALYQAEAFTADFQQSR	3	ALYQAEAFTADFQQSR3	141147	121448	137043
P05545	A0A0G2JSK1;P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	0	ALYQAEAFVADFK	ALYQAEAFVADFK	2	ALYQAEAFVADFK2	171489	154193	146883
P05545	A0A0G2JSK1;P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	0	ALYQAEAFVADFK	ALYQAEAFVADFK	3	ALYQAEAFVADFK3	358775	348734	312000
P05545	A0A0G2JSK1;P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	0	ALYQAEAFVADFKQCNEAK	ALYQAEAFVADFKQC(UniMod:4)NEAK	3	ALYQAEAFVADFKQC(UniMod:4)NEAK3	6411.38	9705.95	18170.6
Q66H63	Q66H63	GDAP2_RAT	Gdap2	Ganglioside-induced differentiation-associated-protein 2	1	ALYQTGVDNCGR	ALYQTGVDNC(UniMod:4)GR	2	ALYQTGVDNC(UniMod:4)GR2	22811	19882.9	18778.6
B5DEI0	B5DEI0	B5DEI0_RAT	Pcyox1l	Pcyox1l protein	1	ALYQVGYETDK	ALYQVGYETDK	2	ALYQVGYETDK2	2886.78	5847.1	2123.97
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	ALYSEYTDGTFTK	ALYSEYTDGTFTK	2	ALYSEYTDGTFTK2	1.17092e+06	831750	739440
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	ALYSEYTDGTFTK	ALYSEYTDGTFTK	3	ALYSEYTDGTFTK3	5805.31		
Q5HZX7	Q5HZX7	LDAH_RAT	Ldah	Lipid droplet-associated hydrolase	1	ALYSLVK	ALYSLVK	2	ALYSLVK2	15308	13242.7	14177.3
P16036	P16036	S25A3_RAT	Slc25a3	Solute carrier family 25 member 3	1	ALYSNILGEENTYLWR	ALYSNILGEENTYLWR	2	ALYSNILGEENTYLWR2	34546	16553.9	35539.4
P16036	P16036	S25A3_RAT	Slc25a3	Solute carrier family 25 member 3	1	ALYSNILGEENTYLWR	ALYSNILGEENTYLWR	3	ALYSNILGEENTYLWR3	7252.82	4872.66	7057.14
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	ALYSQAR	ALYSQAR	1	ALYSQAR1	86255.2	90694.4	105054
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	ALYSQAR	ALYSQAR	2	ALYSQAR2	207094	263815	139146
Q6P686	Q6P686	OSTF1_RAT	Ostf1	Osteoclast-stimulating factor 1	1	ALYTFEPR	ALYTFEPR	2	ALYTFEPR2	473676	490890	510684
Q920A6	Q920A6	RISC_RAT	Scpep1	Retinoid-inducible serine carboxypeptidase	1	ALYTNPK	ALYTNPK	2	ALYTNPK2	77789.1	59865.5	83828.5
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	ALYVHGGYK	ALYVHGGYK	2	ALYVHGGYK2	17830.6	10884.7	11658.7
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ALYWVNGQVPDR	ALYWVNGQVPDR	2	ALYWVNGQVPDR2	1.9911e+06	2.35576e+06	2.40235e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ALYWVNGQVPDR	ALYWVNGQVPDR	3	ALYWVNGQVPDR3	109216	144560	140974
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ALYWVNGQVPDRVSK	ALYWVNGQVPDRVSK	3	ALYWVNGQVPDRVSK3	4837.42	5860.61	8915.84
A0A8J8XL70	A0A8J8XL70	A0A8J8XL70_RAT	Serpinf1	Serpin family F member 1	1	ALYYDLINNPDIHSTYK	ALYYDLINNPDIHSTYK	3	ALYYDLINNPDIHSTYK3	106046	77716.4	102200
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	ALYYLQIHPQELR	ALYYLQIHPQELR	3	ALYYLQIHPQELR3	95739.1	81128.8	83386.6
D4A1A5	D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	ALYYWNNEYIMSLISDNAAK	ALYYWNNEYIMSLISDNAAK	3	ALYYWNNEYIMSLISDNAAK3	5538.63	7952.26	6748.67
A0A8I5ZV26	A0A8I5ZV26	A0A8I5ZV26_RAT	Stom	Stomatin	1	AMAAEAEAAR	AMAAEAEAAR	2	AMAAEAEAAR2	5.39533e+06	5.66533e+06	6.08725e+06
A0A8I5ZV26	A0A8I5ZV26	A0A8I5ZV26_RAT	Stom	Stomatin	1	AMAAEAEAAREAR	AMAAEAEAAREAR	3	AMAAEAEAAREAR3	30007.1	37277.2	36840.6
Q5XIA1	Q5XIA1	NCLN_RAT	Ncln	BOS complex subunit NCLN	1	AMAAVPQDVVR	AMAAVPQDVVR	2	AMAAVPQDVVR2	109990	112434	126950
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	AMADPEVQQIMSDPAMR	AMADPEVQQIMSDPAMR	2	AMADPEVQQIMSDPAMR2	39409.8	32203.6	32200.3
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	AMADPEVQQIMSDPAMR	AMADPEVQQIMSDPAMR	3	AMADPEVQQIMSDPAMR3	28473.8	27883.8	37388.7
Q9Z0J5	Q9Z0J5	TRXR2_RAT	Txnrd2	Thioredoxin reductase 2, mitochondrial	1	AMAEAVQNHVK	AMAEAVQNHVK	3	AMAEAVQNHVK3	5364.32	8310.07	998.919
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	AMAEEDNGSIGEETDSSPGRK	AMAEEDNGSIGEETDSSPGRK	3	AMAEEDNGSIGEETDSSPGRK3	43670.6	34785.9	45801
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	AMAGSVLLDK	AMAGSVLLDK	2	AMAGSVLLDK2	42223	44265.7	30988.2
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	AMAGSVLLDKR	AMAGSVLLDKR	3	AMAGSVLLDKR3	20391.3	15716.8	14943.6
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	AMALSFDQR	AMALSFDQR	2	AMALSFDQR2	27435	26624.2	40079.7
Q792H5	Q792H5	CELF2_RAT	Celf2	CUGBP Elav-like family member 2	1	AMAQNAIK	AMAQNAIK	2	AMAQNAIK2	19720.4	27185.1	12588
D4ADV8	D4ADV8	D4ADV8_RAT	Dvl3	Dishevelled segment polarity protein 3	1	AMASPESGLEVR	AMASPESGLEVR	2	AMASPESGLEVR2	4548.73	10120	5179.36
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	AMATLLSK	AMATLLSK	2	AMATLLSK2	66306.2	56309.5	56533.2
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	AMAVLEPLQVVITNFPAPKPLDIR	AMAVLEPLQVVITNFPAPKPLDIR	3	AMAVLEPLQVVITNFPAPKPLDIR3	4128.12	6559.71	
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	AMAVPWEGGPVLSAVDR	AMAVPWEGGPVLSAVDR	2	AMAVPWEGGPVLSAVDR2	42348.9	48402.2	39627.7
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	AMAYLESINCVHR	AMAYLESINC(UniMod:4)VHR	2	AMAYLESINC(UniMod:4)VHR2	2247.07		
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	AMAYLESINCVHR	AMAYLESINC(UniMod:4)VHR	3	AMAYLESINC(UniMod:4)VHR3	34584	41408.7	41550.4
Q02589	Q02589	ADPRH_RAT	Adprh	ADP-ribosylhydrolase ARH1	1	AMCIGLR	AMC(UniMod:4)IGLR	2	AMC(UniMod:4)IGLR2	10591.3	11525.4	4962.08
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	AMCTDILFK	AMC(UniMod:4)TDILFK	2	AMC(UniMod:4)TDILFK2	24426.6	19193	10404.5
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	AMDDGVK	AMDDGVK	1	AMDDGVK1	577.751	1972.1	
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	AMDDGVKELLTVGQEHWK	AMDDGVKELLTVGQEHWK	4	AMDDGVKELLTVGQEHWK4	13375.2	8721.64	9670.14
B5DEN9	B5DEN9	VPS28_RAT	Vps28	Vacuolar protein sorting-associated protein 28 homolog	1	AMDEIQPDLR	AMDEIQPDLR	2	AMDEIQPDLR2	33219.7	29290.6	31854.3
D3ZUY0	D3ZUY0	D3ZUY0_RAT	Rdh14	Retinol dehydrogenase 14	1	AMDESVAR	AMDESVAR	2	AMDESVAR2	22189.2	27839.7	24573.4
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	AMDFDRDVLNALAEVEQLSK	AMDFDRDVLNALAEVEQLSK	3	AMDFDRDVLNALAEVEQLSK3	17350.2	25320.1	18253.2
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	AMDFNGILTIR	AMDFNGILTIR	2	AMDFNGILTIR2	29866.1	23815.3	25542
M0R4Z8	M0R4Z8	M0R4Z8_RAT	Gatd1	Glutamine amidotransferase like class 1 domain containing 1	1	AMDFVDVTENNAR	AMDFVDVTENNAR	2	AMDFVDVTENNAR2	11993.8	11793.9	19855.9
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	AMDLCLHYDGMAAEIGAIVR	AMDLC(UniMod:4)LHYDGMAAEIGAIVR	3	AMDLC(UniMod:4)LHYDGMAAEIGAIVR3	21278	19431.3	16807.6
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	AMDPAVPNMMIDAAK	AMDPAVPNMMIDAAK	2	AMDPAVPNMMIDAAK2	292687	288552	299152
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	AMDPAVPNMMIDAAK	AMDPAVPNMMIDAAK	3	AMDPAVPNMMIDAAK3	3476.79	1818.25	1671.83
Q68FW9	Q68FW9	CSN3_RAT	Cops3	COP9 signalosome complex subunit 3	1	AMDQEITVNPQFVQK	AMDQEITVNPQFVQK	2	AMDQEITVNPQFVQK2	77156	81023.6	74439.6
Q68FW9	Q68FW9	CSN3_RAT	Cops3	COP9 signalosome complex subunit 3	1	AMDQEITVNPQFVQK	AMDQEITVNPQFVQK	3	AMDQEITVNPQFVQK3	47968.1	57173.2	60393.2
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	AMDSDWFAQNYMGR	AMDSDWFAQNYMGR	2	AMDSDWFAQNYMGR2	63042.2	68223.6	58992.7
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	AMDSDWFAQNYMGR	AMDSDWFAQNYMGR	3	AMDSDWFAQNYMGR3	13802	12375.8	15779.3
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	AMDTWLNADPHNVVVLHNK	AMDTWLNADPHNVVVLHNK	3	AMDTWLNADPHNVVVLHNK3	2849.53	7835.6	1641.2
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	AMDTWLNADPHNVVVLHNK	AMDTWLNADPHNVVVLHNK	4	AMDTWLNADPHNVVVLHNK4	5636.19	10667.6	7844.06
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	AMDVYQK	AMDVYQK	2	AMDVYQK2	112669	85844.4	105220
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	AMDYDLLLR	AMDYDLLLR	2	AMDYDLLLR2	15831.8	20923.7	19132.4
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	AMEAIGLPK	AMEAIGLPK	1	AMEAIGLPK1	2007.69	1312.06	781.944
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	AMEAIGLPK	AMEAIGLPK	2	AMEAIGLPK2	89929.7	135091	118944
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	AMEALALAER	AMEALALAER	2	AMEALALAER2	109412	73057.9	90019.6
P25113	P16290;P25113;A0A8I5ZLA8	PGAM1_RAT	Pgam1	Phosphoglycerate mutase 1	0	AMEAVAAQGK	AMEAVAAQGK	1	AMEAVAAQGK1	1877.56	3324.59	676.892
P25113	P16290;P25113;A0A8I5ZLA8	PGAM1_RAT	Pgam1	Phosphoglycerate mutase 1	0	AMEAVAAQGK	AMEAVAAQGK	2	AMEAVAAQGK2	80188.1	79292.9	78123.1
Q6AY97	Q6AY97	CCD91_RAT	Ccdc91	Coiled-coil domain-containing protein 91	1	AMEEAVK	AMEEAVK	2	AMEEAVK2	19124.8	17051.3	22153.5
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	AMEEGLTPQEICDK	AMEEGLTPQEIC(UniMod:4)DK	2	AMEEGLTPQEIC(UniMod:4)DK2	25709.3	21015.4	20556.5
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	AMEEILR	AMEEILR	2	AMEEILR2	14649.1		18532
Q7TP47	Q7TP47	HNRPQ_RAT	Syncrip	Heterogeneous nuclear ribonucleoprotein Q	1	AMEEMNGK	AMEEMNGK	2	AMEEMNGK2	14808	13576.2	
A0A8I6AUQ7	A0A8I6AUQ7	A0A8I6AUQ7_RAT	Zpr1	ZPR1 zinc finger	1	AMEGAIAER	AMEGAIAER	2	AMEGAIAER2	14367.8	8251.07	11705.6
D4A9Y0	D4A9Y0	D4A9Y0_RAT	Sdf2l1	Stromal cell-derived factor 2-like 1	1	AMEGIFIK	AMEGIFIK	2	AMEGIFIK2	229543	229008	219469
D4A9Y0	D4A9Y0	D4A9Y0_RAT	Sdf2l1	Stromal cell-derived factor 2-like 1	1	AMEGIFIKPGADPSTGHDEL	AMEGIFIKPGADPSTGHDEL	3	AMEGIFIKPGADPSTGHDEL3	24289.8	12174	15538
D4A4H5	D4A4H5	D4A4H5_RAT	Sdf2	Stromal cell derived factor 2	1	AMEGIFMK	AMEGIFMK	2	AMEGIFMK2	22473.4	15137.6	18613.2
D4A4H5	D4A4H5	D4A4H5_RAT	Sdf2	Stromal cell derived factor 2	1	AMEGIFMKPSELLR	AMEGIFMKPSELLR	3	AMEGIFMKPSELLR3	22629.5	14549	20115.1
A0A8I5ZWZ4	A0A8I5ZWZ4	A0A8I5ZWZ4_RAT	Nmt2	Glycylpeptide N-tetradecanoyltransferase	1	AMELLSACQGPAR	AMELLSAC(UniMod:4)QGPAR	2	AMELLSAC(UniMod:4)QGPAR2	2889.33	2986.82	
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	AMELSFALVNGNNIR	AMELSFALVNGNNIR	2	AMELSFALVNGNNIR2	11195	14471	12673.8
D4ADM2	D4ADM2	D4ADM2_RAT	Pan3	PAN2-PAN3 deadenylation complex subunit PAN3	1	AMELVTINYSSDLK	AMELVTINYSSDLK	2	AMELVTINYSSDLK2	6831.43	2056.11	
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	AMEMQIK	AMEMQIK	2	AMEMQIK2	215769	213569	192411
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	AMENGEIDQASEEK	AMENGEIDQASEEK	2	AMENGEIDQASEEK2	6062.4	4097.85	7598.76
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	AMENGEIDQASEEKK	AMENGEIDQASEEKK	3	AMENGEIDQASEEKK3	11655.2	4830.56	20780.1
A0A8I5ZKJ3	A0A8I5ZKJ3	A0A8I5ZKJ3_RAT	Ndufa2	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2	1	AMENVLSGK	AMENVLSGK	2	AMENVLSGK2	69357.4	59304.4	63248.9
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	AMEQLTK	AMEQLTK	2	AMEQLTK2	116178	131266	116780
Q4V892	Q4V892	SIGIR_RAT	Sigirr	Single Ig IL-1-related receptor	1	AMESELDPDPEGDLGVR	AMESELDPDPEGDLGVR	2	AMESELDPDPEGDLGVR2	9441.59		8541.69
Q9Z2X5	Q9Z2X5	HOME3_RAT	Homer3	Homer protein homolog 3	1	AMESNLEEAR	AMESNLEEAR	2	AMESNLEEAR2	27761.6	28830	28177.5
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	AMEVDERPTEQYSDIGGLDK	AMEVDERPTEQYSDIGGLDK	3	AMEVDERPTEQYSDIGGLDK3	184591	178392	208685
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	AMEWISAK	AMEWISAK	1	AMEWISAK1	3015.89	1747.89	1948.13
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	AMEWISAK	AMEWISAK	2	AMEWISAK2	272032	240479	278851
D4A6D9	D4A6D9	D4A6D9_RAT	Hs1bp3	HCLS1 binding protein 3	1	AMFDEILR	AMFDEILR	2	AMFDEILR2	13210	11285.8	8411
Q9QX79	Q9QX79	FETUB_RAT	Fetub	Fetuin-B	1	AMFHVNKPR	AMFHVNKPR	2	AMFHVNKPR2	21049.4	10121.3	19194.1
A1L1K3	A1L1K3	APC5_RAT	Anapc5	Anaphase-promoting complex subunit 5	1	AMFLVSK	AMFLVSK	2	AMFLVSK2	10913.1	7825.17	9222.7
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	AMGDTEIK	AMGDTEIK	1	AMGDTEIK1	1328.78		
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	AMGDTEIK	AMGDTEIK	2	AMGDTEIK2	274943	264840	282284
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	AMGDTEIKDGER	AMGDTEIKDGER	2	AMGDTEIKDGER2	6270.47	5097.37	2547.67
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	AMGDTEIKDGER	AMGDTEIKDGER	3	AMGDTEIKDGER3		141302	
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	AMGDTEIKDGERLPLAVK	AMGDTEIKDGERLPLAVK	3	AMGDTEIKDGERLPLAVK3	6939.96		
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	AMGDTEIKDGERLPLAVK	AMGDTEIKDGERLPLAVK	4	AMGDTEIKDGERLPLAVK4	8183.29	13732.6	20124.2
Q5RKL5	Q5RKL5	STEA3_RAT	Steap3	Metalloreductase STEAP3	1	AMGFTPLDMGSLASAR	AMGFTPLDMGSLASAR	2	AMGFTPLDMGSLASAR2	3009.72	7751.81	4006.32
Q5RJK6	Q5RJK6	Q5RJK6_RAT	Inpp1	Inositol polyphosphate-1-phosphatase	1	AMGGGIVDMK	AMGGGIVDMK	2	AMGGGIVDMK2	23821.5	16139.8	16426.9
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	AMGIETSDIADVPSDTSK	AMGIETSDIADVPSDTSK	2	AMGIETSDIADVPSDTSK2	15445.5	8961.18	6503.25
Q00715	Q00715;A0A8I6A2W1;A0A8I6AGQ8;D3ZNZ9;A0A8I5ZLH6;A0A8I6A7P3;M0RBQ5;A0A8I5ZSA8;A0A8I6AFW8;G3V9C7	H2B1_RAT		Histone H2B type 1	0	AMGIMNSFVNDIFER	AMGIMNSFVNDIFER	2	AMGIMNSFVNDIFER2	11955.5	7303.12	8496.9
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	AMGLPCSTTQGK	AMGLPC(UniMod:4)STTQGK	2	AMGLPC(UniMod:4)STTQGK2	77265.2	80069.7	86774.9
A0A8I6AL39	A0A8I6AL39	A0A8I6AL39_RAT	Fgd3	FYVE, RhoGEF and PH domain containing 3	1	AMGLVSTWTQR	AMGLVSTWTQR	2	AMGLVSTWTQR2	8702.11	15100.5	13275.1
P04897	P04897	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	1	AMGNLQIDFADPQR	AMGNLQIDFADPQR	2	AMGNLQIDFADPQR2	437260	454739	468915
P04897	P04897	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	1	AMGNLQIDFADPQR	AMGNLQIDFADPQR	3	AMGNLQIDFADPQR3	19280.3	34082.3	23325.5
P04897	P04897	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	1	AMGNLQIDFADPQRADDAR	AMGNLQIDFADPQRADDAR	3	AMGNLQIDFADPQRADDAR3	98403.2	162246	159651
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	AMGPGIQQDIK	AMGPGIQQDIK	2	AMGPGIQQDIK2	16432.3	18555.4	22995
Q07205	Q07205;A0A8I6AVQ3	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	AMGPLVLTEVLFDEK	AMGPLVLTEVLFDEK	2	AMGPLVLTEVLFDEK2	15117	19745.7	21500
D3ZRH1	D3ZRH1	D3ZRH1_RAT	Oxa1l	OXA1L, mitochondrial inner membrane protein	1	AMGSVCR	AMGSVC(UniMod:4)R	2	AMGSVC(UniMod:4)R2	80514.1	89449.5	
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	AMGVGWWVR	AMGVGWWVR	2	AMGVGWWVR2	29742	29609	24541.3
D4A183	D4A183	D4A183_RAT	Vnn3	Vanin 3	1	AMGVNVLAANTHNTR	AMGVNVLAANTHNTR	3	AMGVNVLAANTHNTR3	4384.2	3452.77	4242.57
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	AMGVPLPTLQWYK	AMGVPLPTLQWYK	2	AMGVPLPTLQWYK2	17646	18797.2	12239.2
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	AMGVVVATGVNTEIGK	AMGVVVATGVNTEIGK	2	AMGVVVATGVNTEIGK2	81067	66962.8	61150.1
Q4QQT3	Q4QQT3	CELF1_RAT	Celf1	CUGBP Elav-like family member 1	1	AMHQAQTMEGCSSPMVVK	AMHQAQTMEGC(UniMod:4)SSPMVVK	3	AMHQAQTMEGC(UniMod:4)SSPMVVK3	5864.28	2581.33	5167.21
Q792H5	Q792H5	CELF2_RAT	Celf2	CUGBP Elav-like family member 2	1	AMHQSQTMEGCSSPIVVK	AMHQSQTMEGC(UniMod:4)SSPIVVK	3	AMHQSQTMEGC(UniMod:4)SSPIVVK3	13244	9646.96	9869.74
O55158	O55158	O55158_RAT	Tspan8	Tetraspanin	1	AMIAFQSEFK	AMIAFQSEFK	2	AMIAFQSEFK2	5821.53	5633.03	14949.5
A0A8I6A9B2	A0A8I6A9B2	A0A8I6A9B2_RAT	Naa10	N-terminal amino-acid N(alpha)-acetyltransferase NatA	1	AMIENFNAK	AMIENFNAK	2	AMIENFNAK2	34216.6	46584.3	37796.2
Q4V8K3	Q4V8K3;A0A0G2K7P4	NAA11_RAT	Naa11	N-alpha-acetyltransferase 11	0	AMIENFSAK	AMIENFSAK	2	AMIENFSAK2	17334.7	12406.5	23705.8
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	AMIEVINHK	AMIEVINHK	2	AMIEVINHK2	10853.8	5885.78	6398.03
D4ABM5	D4ABM5	D4ABM5_RAT	Mrps34	Mitochondrial ribosomal protein S34	1	AMILAER	AMILAER	2	AMILAER2	11978.1	13580.5	12505.2
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	AMITDPEVVFVANLTK	AMITDPEVVFVANLTK	2	AMITDPEVVFVANLTK2	3106.41		4208.56
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	AMITDPEVVFVANLTK	AMITDPEVVFVANLTK	3	AMITDPEVVFVANLTK3	5765.74	4934.44	2857.74
A0A0G2K618	A0A0G2K618	A0A0G2K618_RAT	Large1	LARGE xylosyl- and glucuronyltransferase 1	1	AMIVPAFETLR	AMIVPAFETLR	2	AMIVPAFETLR2	17965.4	21810	14678.2
P83006	P83006	PAFA2_RAT	Pafah2	Platelet-activating factor acetylhydrolase 2, cytoplasmic	1	AMLAFLQK	AMLAFLQK	2	AMLAFLQK2	13333.1	10181.7	18721.5
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	AMLAIEEWQK	AMLAIEEWQK	2	AMLAIEEWQK2	152451	148736	156944
Q3KR92	Q3KR92	TPST1_RAT	Tpst1	Protein-tyrosine sulfotransferase 1	1	AMLDAHPDIR	AMLDAHPDIR	2	AMLDAHPDIR2	2620.21		2720.64
Q5RJS8	Q5RJS8	TPST2_RAT	Tpst2	Protein-tyrosine sulfotransferase 2	1	AMLDAHPEVR	AMLDAHPEVR	2	AMLDAHPEVR2	3521.08	9529.21	
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	AMLFDENK	AMLFDENK	2	AMLFDENK2	16806.4	21214	12615.4
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	AMLFDENKK	AMLFDENKK	2	AMLFDENKK2	16066.7	22254.6	16923.5
Q9JLT6	Q9JLT6	BID_RAT	Bid	BH3-interacting domain death agonist	1	AMLIMTMLLAK	AMLIMTMLLAK	2	AMLIMTMLLAK2	12846.3	4293.62	9652.07
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	AMLNEAEK	AMLNEAEK	2	AMLNEAEK2	112967	128556	113487
B0BNF8	B0BNF8	B0BNF8_RAT	Htatip2	HIV-1 Tat interactive protein 2	1	AMLNNLVSPGSGQMELLENK	AMLNNLVSPGSGQMELLENK	3	AMLNNLVSPGSGQMELLENK3		3429.09	7958.22
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	AMLPCPDYDTDTK	AMLPC(UniMod:4)PDYDTDTK	2	AMLPC(UniMod:4)PDYDTDTK2	26746.2	30948.3	31820.3
P31211	P31211	CBG_RAT	Serpina6	Corticosteroid-binding globulin	1	AMLQLDEGNVLPNSTNGAPLHLR	AMLQLDEGNVLPNSTNGAPLHLR	3	AMLQLDEGNVLPNSTNGAPLHLR3	2675.12	3979.54	
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	AMLQVHGGSGPR	AMLQVHGGSGPR	2	AMLQVHGGSGPR2	12017.9	13347.1	10909.6
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	AMLQVHGGSGPR	AMLQVHGGSGPR	3	AMLQVHGGSGPR3	141468	167712	170325
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	AMLSANIR	AMLSANIR	2	AMLSANIR2	313616	291694	322056
P83941	A0A0G2K2A0;P83941;A0A8I6AKW3	ELOC_RAT	Eloc	Elongin-C	0	AMLSGPGQFAENETNEVNFR	AMLSGPGQFAENETNEVNFR	3	AMLSGPGQFAENETNEVNFR3	49995.5	44708.2	40730.6
A0A8I5ZMM2	P07756;A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	0	AMLSTGFK	AMLSTGFK	2	AMLSTGFK2	52228	55412.5	44007.5
Q704E8	Q704E8	ABCB7_RAT	Abcb7	Iron-sulfur clusters transporter ABCB7, mitochondrial	1	AMLSYVWPK	AMLSYVWPK	2	AMLSYVWPK2	9500.33	10172.2	9390
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	AMLTAVDWTLTK	AMLTAVDWTLTK	2	AMLTAVDWTLTK2	17924.8	15831.2	15431.3
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	AMLTAVDWTLTKDEK	AMLTAVDWTLTKDEK	3	AMLTAVDWTLTKDEK3		7001.07	4018
Q2TGK3	Q2TGK3	ZDHC3_RAT	Zdhhc3	Palmitoyltransferase ZDHHC3	1	AMLTDPGAVPK	AMLTDPGAVPK	2	AMLTDPGAVPK2	8967.66	8539.04	9588.65
D4AA31	D4AA31	D4AA31_RAT	Prcp	Prolylcarboxypeptidase	1	AMLVFAEHR	AMLVFAEHR	2	AMLVFAEHR2	6783.64		4720.58
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	AMLWMSEK	AMLWMSEK	2	AMLWMSEK2	26543.2	16080.1	41955.7
A0A8I6ADA8	A0A8I6ADA8	A0A8I6ADA8_RAT	Abhd4	Abhydrolase domain containing 4, N-acyl phospholipase B	1	AMMESFGWAR	AMMESFGWAR	2	AMMESFGWAR2	48494.7	70380.8	41562.4
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	AMMYSGELK	AMMYSGELK	2	AMMYSGELK2	94501.2	82456.7	100534
B4F785	B4F785	EGFLA_RAT	Egflam	Pikachurin	1	AMNAYGFSLR	AMNAYGFSLR	2	AMNAYGFSLR2	6231.74	5521.57	7167.93
B5DEY9	B5DEY9	B5DEY9_RAT	Csgalnact1	Hexosyltransferase	1	AMNEASHGQLGMLVFR	AMNEASHGQLGMLVFR	3	AMNEASHGQLGMLVFR3	4122.5		12950.6
D3ZUI1	D3ZUI1	D3ZUI1_RAT	Apip	Methylthioribulose-1-phosphate dehydratase	1	AMNEYPDSCAVLVR	AMNEYPDSC(UniMod:4)AVLVR	2	AMNEYPDSC(UniMod:4)AVLVR2	8670.14	10056.1	15256.4
Q925G0	Q925G0	RBM3_RAT	Rbm3	RNA-binding protein 3	1	AMNGESLDGR	AMNGESLDGR	2	AMNGESLDGR2	9745.91	5602.32	14009.7
Q704E8	Q704E8	ABCB7_RAT	Abcb7	Iron-sulfur clusters transporter ABCB7, mitochondrial	1	AMNIVVPFMFK	AMNIVVPFMFK	2	AMNIVVPFMFK2	8687.3	11926.9	8972.42
A0A8I6A6W3	A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	1	AMNNSWHPECFR	AMNNSWHPEC(UniMod:4)FR	2	AMNNSWHPEC(UniMod:4)FR2	89697	69421.3	79476.6
A0A8I6A6W3	A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	1	AMNNSWHPECFR	AMNNSWHPEC(UniMod:4)FR	3	AMNNSWHPEC(UniMod:4)FR3	850099	811057	926560
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	AMNPQDLQNTGVPVAATAK	AMNPQDLQNTGVPVAATAK	2	AMNPQDLQNTGVPVAATAK2	34257.2	28339.2	34485
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	AMNPQDLQNTGVPVAATAK	AMNPQDLQNTGVPVAATAK	3	AMNPQDLQNTGVPVAATAK3	64761.1	77238.7	79236
D4A5Q2	D4A5Q2	D4A5Q2_RAT	Smc2	Structural maintenance of chromosomes protein	1	AMNVLTEAEER	AMNVLTEAEER	2	AMNVLTEAEER2	6133.75	4570	3091.62
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	AMPEDVYSVR	AMPEDVYSVR	2	AMPEDVYSVR2	108609	89499.7	93286.5
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	AMPESPENIAK	AMPESPENIAK	2	AMPESPENIAK2	50738.7	60675.8	62872.9
F1M9Q3	F1M9Q3	F1M9Q3_RAT	Ltn1	E3 ubiquitin-protein ligase listerin	1	AMQEFGTMCTER	AMQEFGTMC(UniMod:4)TER	2	AMQEFGTMC(UniMod:4)TER2	11094.1	7565.66	6993.35
Q8R3Z7	Q8R3Z7	Q8R3Z7_RAT	Ehd4	EH-domain containing 4	1	AMQEQLENYDFTK	AMQEQLENYDFTK	2	AMQEQLENYDFTK2	42179.8	37760.9	33155
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	AMQETVDALR	AMQETVDALR	2	AMQETVDALR2	39089.4	21137.3	27658.2
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	AMQGVFQNTSK	AMQGVFQNTSK	2	AMQGVFQNTSK2	311983	319876	308708
A0A8I6GM43	A0A8I6GM43	A0A8I6GM43_RAT	Pbdc1	Polysaccharide biosynthesis domain containing 1	1	AMQHAEVYYK	AMQHAEVYYK	3	AMQHAEVYYK3	27490.4	26795.4	20146.9
Q6Q0N0	Q6Q0N0	CSTN1_RAT	Clstn1	Calsyntenin-1	1	AMQHISYLNSR	AMQHISYLNSR	3	AMQHISYLNSR3	6248.02	6172.3	5500.42
M0R8A3	M0R8A3	M0R8A3_RAT	Gp6	Glycoprotein 6 (platelet)	1	AMQRPLPPLPLA	AMQRPLPPLPLA	2	AMQRPLPPLPLA2	660464	681282	586999
M0R8A3	M0R8A3	M0R8A3_RAT	Gp6	Glycoprotein 6 (platelet)	1	AMQRPLPPLPLA	AMQRPLPPLPLA	3	AMQRPLPPLPLA3	12562.5	14759.3	6626.39
Q8CGS4	Q8CGS4	CHMP3_RAT	Chmp3	Charged multivesicular body protein 3	1	AMQSLVK	AMQSLVK	1	AMQSLVK1	2371.35	759.214	
Q8CGS4	Q8CGS4	CHMP3_RAT	Chmp3	Charged multivesicular body protein 3	1	AMQSLVK	AMQSLVK	2	AMQSLVK2	335827	308247	323174
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	AMSAVLCCGPVADNVGLSSDGYLYK	AMSAVLC(UniMod:4)C(UniMod:4)GPVADNVGLSSDGYLYK	3	AMSAVLC(UniMod:4)C(UniMod:4)GPVADNVGLSSDGYLYK3	8134	3399.89	7449.68
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	AMSAVLCCGPVFDNVGLSPDGYLYK	AMSAVLC(UniMod:4)C(UniMod:4)GPVFDNVGLSPDGYLYK	3	AMSAVLC(UniMod:4)C(UniMod:4)GPVFDNVGLSPDGYLYK3		9382.19	
A0A140UHX9	A0A140UHX9	A0A140UHX9_RAT	Ccz1	CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated	1	AMSDYWVVGK	AMSDYWVVGK	2	AMSDYWVVGK2	3153.54	5301.22	14496.5
D3Z8X6	D3Z8X6	D3Z8X6_RAT	Dtx3l	E3 ubiquitin-protein ligase	1	AMSFKPVCPVCLTPYGVQK	AMSFKPVC(UniMod:4)PVC(UniMod:4)LTPYGVQK	3	AMSFKPVC(UniMod:4)PVC(UniMod:4)LTPYGVQK3	5009.63		2168.1
B2GV94	B2GV94	B2GV94_RAT	Retreg3	Fam134c protein	1	AMSGSWER	AMSGSWER	2	AMSGSWER2	16789.6	17382.9	
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	AMSIGAR	AMSIGAR	1	AMSIGAR1	2211.76		4386.66
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	AMSIYHTFLR	AMSIYHTFLR	3	AMSIYHTFLR3	20788.5	23102.3	27959.1
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	AMSLVSNEGDSEQNEIR	AMSLVSNEGDSEQNEIR	2	AMSLVSNEGDSEQNEIR2	11717.3	17074.9	8489.23
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	AMSLVSNEGDSEQNEIR	AMSLVSNEGDSEQNEIR	3	AMSLVSNEGDSEQNEIR3		4955.96	
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	AMSLVSSDSEGEQNELR	AMSLVSSDSEGEQNELR	2	AMSLVSSDSEGEQNELR2	17163.9	22336.3	27527.9
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	AMSQLEEELR	AMSQLEEELR	2	AMSQLEEELR2	8947.9	5319.44	6983.1
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	AMSQLEEELRR	AMSQLEEELRR	3	AMSQLEEELRR3	22690.4	18733.8	9545.23
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	AMSRPILYSNWLSK	AMSRPILYSNWLSK	2	AMSRPILYSNWLSK2		10057.8	6405.94
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	AMSRPILYSNWLSK	AMSRPILYSNWLSK	3	AMSRPILYSNWLSK3	179234	251852	181053
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	AMSSLQNDR	AMSSLQNDR	2	AMSSLQNDR2	8905.28	5082.96	5137.02
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	AMSTTSVSSSQPGK	AMSTTSVSSSQPGK	2	AMSTTSVSSSQPGK2	215028	267153	234163
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	AMTAADMETR	AMTAADMETR	2	AMTAADMETR2	262370	266081	306359
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	AMTANVASVR	AMTANVASVR	2	AMTANVASVR2	3.00511e+06	3.84447e+06	3.24906e+06
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	AMTDLQNMLEAK	AMTDLQNMLEAK	2	AMTDLQNMLEAK2		6008.08	5614.44
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	AMTGVEQWPYR	AMTGVEQWPYR	2	AMTGVEQWPYR2	324614	282654	323867
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	AMTGVEQWPYR	AMTGVEQWPYR	3	AMTGVEQWPYR3	13310.6	7651.02	8684.01
P63144	P63144;P62483	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	0	AMTHVINQGMAMYWGTSR	AMTHVINQGMAMYWGTSR	3	AMTHVINQGMAMYWGTSR3	104037	86045.6	83026.2
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	AMTLEEAEAFVGAER	AMTLEEAEAFVGAER	3	AMTLEEAEAFVGAER3	3283.88		
O88339	O88339	EPN1_RAT	Epn1	Epsin-1	1	AMTLMEYLIK	AMTLMEYLIK	2	AMTLMEYLIK2	25571.5	18449.1	20418.8
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	AMTSLQNER	AMTSLQNER	2	AMTSLQNER2	40523	28452	25107.7
Q64591	Q64591	DECR_RAT	Decr1	2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], mitochondrial	1	AMTTFLSSLGAQCVIASR	AMTTFLSSLGAQC(UniMod:4)VIASR	2	AMTTFLSSLGAQC(UniMod:4)VIASR2	16544.9	7666.33	13394.2
P18421	P18421	PSB1_RAT	Psmb1	Proteasome subunit beta type-1	1	AMTTGAIAAMLSTILYSR	AMTTGAIAAMLSTILYSR	3	AMTTGAIAAMLSTILYSR3		33311.8	136876
P04631	P04631	S100B_RAT	S100b	Protein S100-B	1	AMVALIDVFHQYSGR	AMVALIDVFHQYSGR	3	AMVALIDVFHQYSGR3	15406.8	11044.1	8617.4
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	AMVAQPAENR	AMVAQPAENR	2	AMVAQPAENR2	112629	106145	126424
P29410	P29410	KAD2_RAT	Ak2	Adenylate kinase 2, mitochondrial	1	AMVASGSELGK	AMVASGSELGK	2	AMVASGSELGK2	114611	57377.2	132407
P29410	P29410	KAD2_RAT	Ak2	Adenylate kinase 2, mitochondrial	1	AMVASGSELGKK	AMVASGSELGKK	2	AMVASGSELGKK2	3688.74	7493.05	4585.16
P29410	P29410	KAD2_RAT	Ak2	Adenylate kinase 2, mitochondrial	1	AMVASGSELGKK	AMVASGSELGKK	3	AMVASGSELGKK3	13471.9	28898.3	13666.5
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	AMVEEEITR	AMVEEEITR	2	AMVEEEITR2	38085.6	44181.9	31988.2
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	AMVENGGLVTSNPLR	AMVENGGLVTSNPLR	2	AMVENGGLVTSNPLR2	2415.4		3221.24
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	AMVEVEDFVDPNGK	AMVEVEDFVDPNGK	2	AMVEVEDFVDPNGK2	4598.11		6111.2
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	AMVFMDIK	AMVFMDIK	2	AMVFMDIK2	22147.5	34257.9	35385.6
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	AMVGFSGVMK	AMVGFSGVMK	2	AMVGFSGVMK2	26176.5	54024	53450.7
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	AMVLAAFVQR	AMVLAAFVQR	2	AMVLAAFVQR2	10543	12941.7	4185.39
Q63798	Q63798	PSME2_RAT	Psme2	Proteasome activator complex subunit 2	1	AMVLDLR	AMVLDLR	2	AMVLDLR2	133411	135746	119077
A0A8I5Y4X4	A0A8I5Y4X4	A0A8I5Y4X4_RAT	Nub1	Negative regulator of ubiquitin-like proteins 1	1	AMVLELK	AMVLELK	2	AMVLELK2	42190.9	49265.6	43908.6
B0K020	B0K020	CISD1_RAT	Cisd1	CDGSH iron-sulfur domain-containing protein 1	1	AMVNLQIQK	AMVNLQIQK	2	AMVNLQIQK2	50732.4	57517.2	55676
B0K017	B0K017	B0K017_RAT	Adprs	ADP-ribosylserine hydrolase	1	AMVQSLLAK	AMVQSLLAK	2	AMVQSLLAK2	8832.96	6159.5	2737.88
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	AMVQYAK	AMVQYAK	2	AMVQYAK2	39300.1	43399.9	31820.9
Q66HF9	Q4V7E8;Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	0	AMVSNAQLDNEK	AMVSNAQLDNEK	2	AMVSNAQLDNEK2	517999	496245	503388
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	AMVTETMMK	AMVTETMMK	2	AMVTETMMK2	28968.4	30926.2	34986.5
A0A8I5ZKI9	A0A8I5ZKI9	A0A8I5ZKI9_RAT	Bicd1	BICD cargo adaptor 1	1	AMVTETMTK	AMVTETMTK	2	AMVTETMTK2	6375.25	1170.27	1071.28
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	AMVTVQATLGLSILR	AMVTVQATLGLSILR	2	AMVTVQATLGLSILR2	49275.2	56694.4	39519.4
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	AMVTVQATLGLSILR	AMVTVQATLGLSILR	3	AMVTVQATLGLSILR3	24921	12592.7	21280
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	AMWGFACTVR	AMWGFAC(UniMod:4)TVR	2	AMWGFAC(UniMod:4)TVR2	8879.17	12074.5	6715.11
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	AMWPDGQQDITEVTK	AMWPDGQQDITEVTK	2	AMWPDGQQDITEVTK2	115345	122627	116224
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	AMYLPDTLSPADQLK	AMYLPDTLSPADQLK	2	AMYLPDTLSPADQLK2	170809	178333	174681
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	AMYLPDTLSPADQLK	AMYLPDTLSPADQLK	3	AMYLPDTLSPADQLK3	10721.9	12333.5	5090.89
Q5XIL4	Q5XIL4	Q5XIL4_RAT	Sorbs3	Sorbin and SH3 domain containing 3	1	AMYQYRPQNEDELELR	AMYQYRPQNEDELELR	3	AMYQYRPQNEDELELR3	36050.8	34569.2	43074
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	AMYSAELEK	AMYSAELEK	2	AMYSAELEK2	28771.3	23922.6	12625.7
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	ANACNSVIK	ANAC(UniMod:4)NSVIK	1	ANAC(UniMod:4)NSVIK1	822.29		2590.36
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	ANACNSVIK	ANAC(UniMod:4)NSVIK	2	ANAC(UniMod:4)NSVIK2	257284	595772	447440
P11497	E9PSQ0;P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	0	ANAEYIK	ANAEYIK	1	ANAEYIK1	479036	630899	342570
Q5U1Z9	Q5U1Z9	Q5U1Z9_RAT	Mtx2	Metaxin 2	1	ANAEYMSPSGK	ANAEYMSPSGK	2	ANAEYMSPSGK2	56436.8	41414.2	58798.5
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	ANAGEESVMNLDK	ANAGEESVMNLDK	2	ANAGEESVMNLDK2	57566.5	50307.1	66174.9
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	ANAGEESVMNLDKLR	ANAGEESVMNLDKLR	3	ANAGEESVMNLDKLR3		8373.02	19566.7
P08541	P19488;P08542;F1M3E3;P08541	UD2B2_RAT	Ugt2b	UDP-glucuronosyltransferase 2B2	0	ANAIAWALAQIPQK	ANAIAWALAQIPQK	2	ANAIAWALAQIPQK2	4618.09	4784.59	6616.81
P08541	P19488;P08542;F1M3E3;P08541	UD2B2_RAT	Ugt2b	UDP-glucuronosyltransferase 2B2	0	ANAIAWALAQIPQK	ANAIAWALAQIPQK	3	ANAIAWALAQIPQK3	5717.27	6459.5	6802.27
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	ANALHATNNLQIIPDFSLK	ANALHATNNLQIIPDFSLK	3	ANALHATNNLQIIPDFSLK3	28475.6	37765.9	33053.2
Q5XIR9	Q5XIR9	UBAC1_RAT	Ubac1	Ubiquitin-associated domain-containing protein 1	1	ANAMLDEDEDERVDETALR	ANAMLDEDEDERVDETALR	3	ANAMLDEDEDERVDETALR3	23448.8	20733	8863.63
P10716	P10716	CLC4F_RAT	Clec4f	C-type lectin domain family 4 member F	1	ANAMTSQTQGLLK	ANAMTSQTQGLLK	2	ANAMTSQTQGLLK2	15907.1	16261.8	16574.2
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	ANAPSCDRLEDLASLVYLNESSVLHTLR	ANAPSC(UniMod:4)DRLEDLASLVYLNESSVLHTLR	4	ANAPSC(UniMod:4)DRLEDLASLVYLNESSVLHTLR4	1946.2	8381.99	3387.49
D4ADM2	D4ADM2	D4ADM2_RAT	Pan3	PAN2-PAN3 deadenylation complex subunit PAN3	1	ANAPSFFMADELR	ANAPSFFMADELR	2	ANAPSFFMADELR2	11231.5	16920.2	14810.4
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	ANATEFGLASGVFTR	ANATEFGLASGVFTR	2	ANATEFGLASGVFTR2	7912.46	7460.8	3466.58
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	ANAVDQSHLHDSSQK	ANAVDQSHLHDSSQK	2	ANAVDQSHLHDSSQK2			7975.21
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	ANAVDQSHLHDSSQK	ANAVDQSHLHDSSQK	3	ANAVDQSHLHDSSQK3			7402.29
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	ANCDSPTPCLR	ANC(UniMod:4)DSPTPC(UniMod:4)LR	2	ANC(UniMod:4)DSPTPC(UniMod:4)LR2	300744	308825	320283
Q0D2L6	Q0D2L6;B2RZ38	Q0D2L6_RAT	Rragc	Ras-related GTP-binding protein	0	ANDDLADAGLEK	ANDDLADAGLEK	2	ANDDLADAGLEK2	15152.7	11439.9	15162
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	ANDPYAHLSK	ANDPYAHLSK	2	ANDPYAHLSK2	7710.67	7598.66	13663.8
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	ANDQAVPIETR	ANDQAVPIETR	2	ANDQAVPIETR2	51802.1	38896.2	37892.8
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	ANDQDSLISGILR	ANDQDSLISGILR	2	ANDQDSLISGILR2	48403.9	45668.6	55797.5
Q5XI81	Q5XI81	FXR1_RAT	Fxr1	RNA-binding protein FXR1	1	ANDQEPCGWWLAK	ANDQEPC(UniMod:4)GWWLAK	2	ANDQEPC(UniMod:4)GWWLAK2	22307.8	28042.6	22014.8
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	ANDQFLESQR	ANDQFLESQR	2	ANDQFLESQR2	13203.3	15248.6	17792.3
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	ANDQIPGK	ANDQIPGK	2	ANDQIPGK2	88486.6	94126.4	90124.9
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	ANDTTFGLAAGVFTR	ANDTTFGLAAGVFTR	2	ANDTTFGLAAGVFTR2	63442.6	58056.4	51457.9
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	ANDTTFGLAAGVFTR	ANDTTFGLAAGVFTR	3	ANDTTFGLAAGVFTR3	3828.12		2549.95
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	ANDVLLSHMITFLNDK	ANDVLLSHMITFLNDK	3	ANDVLLSHMITFLNDK3	10674.1	14593.3	9077.77
D3ZFK8	D3ZFK8	D3ZFK8_RAT	Farp2	FERM, ARH/RhoGEF and pleckstrin domain protein 2	1	ANDYLPNQEQSLDK	ANDYLPNQEQSLDK	2	ANDYLPNQEQSLDK2	4368.55	5326.66	4251.64
A0A8I6A7R6	A0A8I6A7R6	A0A8I6A7R6_RAT	ENSRNOG00000065040	Ig-like domain-containing protein	1	ANDYSTVYSASVK	ANDYSTVYSASVK	2	ANDYSTVYSASVK2	200816	474678	201624
A0A8I6A7R6	A0A8I6A7R6	A0A8I6A7R6_RAT	ENSRNOG00000065040	Ig-like domain-containing protein	1	ANDYSTVYSASVK	ANDYSTVYSASVK	3	ANDYSTVYSASVK3	84815.1	118750	107379
A0A8I6A7R6	A0A8I6A7R6	A0A8I6A7R6_RAT	ENSRNOG00000065040	Ig-like domain-containing protein	1	ANDYSTVYSASVKDR	ANDYSTVYSASVKDR	3	ANDYSTVYSASVKDR3	10944.7	13796.9	14383.4
A0A8I6AZI9	A0A8I6AZI9	A0A8I6AZI9_RAT	Ubash3a	Ubiquitin associated and SH3 domain containing, A	1	ANEADTWVK	ANEADTWVK	2	ANEADTWVK2	7578.64		10789.5
Q5XIP1	Q5XIP1	PELO_RAT	Pelo	Protein pelota homolog	1	ANEALAIDTLLISDELFR	ANEALAIDTLLISDELFR	3	ANEALAIDTLLISDELFR3			3516.24
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	ANEDVCQDCMK	ANEDVC(UniMod:4)QDC(UniMod:4)MK	2	ANEDVC(UniMod:4)QDC(UniMod:4)MK2	103207	94514.6	73982
Q62785	Q62785	HAP28_RAT	Pdap1	28 kDa heat- and acid-stable phosphoprotein	1	ANEEDEQEEGGDGASGDPK	ANEEDEQEEGGDGASGDPK	2	ANEEDEQEEGGDGASGDPK2	1743.36		6423.06
Q62785	Q62785	HAP28_RAT	Pdap1	28 kDa heat- and acid-stable phosphoprotein	1	ANEEDEQEEGGDGASGDPK	ANEEDEQEEGGDGASGDPK	3	ANEEDEQEEGGDGASGDPK3			978.831
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	ANEEELK	ANEEELK	2	ANEEELK2	58613.4	76987.2	73584.4
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	ANEEIAQVR	ANEEIAQVR	2	ANEEIAQVR2	92896.7	106835	60782.1
Q9Z0V6	Q9Z0V6	PRDX3_RAT	Prdx3	Thioredoxin-dependent peroxide reductase, mitochondrial	1	ANEFHDVNCEVVAVSVDSHFSHLAWINTPR	ANEFHDVNC(UniMod:4)EVVAVSVDSHFSHLAWINTPR	4	ANEFHDVNC(UniMod:4)EVVAVSVDSHFSHLAWINTPR4	65215.1	67716.2	60313.1
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	ANEFLEVGK	ANEFLEVGK	2	ANEFLEVGK2	75864.7	78507.8	81214.1
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	ANEHQGIGFLNDPR	ANEHQGIGFLNDPR	3	ANEHQGIGFLNDPR3			18689.9
Q80WE1	Q80WE1	FMR1_RAT	Fmr1	Fragile X messenger ribonucleoprotein 1	1	ANEKEPCCWWLAK	ANEKEPC(UniMod:4)C(UniMod:4)WWLAK	3	ANEKEPC(UniMod:4)C(UniMod:4)WWLAK3	1542.4	2614.25	1548.84
O35977	O35977	O35977_RAT	Gfra2	GDNF family receptor alpha-2	1	ANELCAAESNCSSR	ANELC(UniMod:4)AAESNC(UniMod:4)SSR	2	ANELC(UniMod:4)AAESNC(UniMod:4)SSR2	32831	21597.3	25752.6
Q4V884	Q4V884	Q4V884_RAT	Cdc16	CDC16 cell division cycle 16 homolog (S. cerevisiae)	1	ANELFYLSHK	ANELFYLSHK	3	ANELFYLSHK3	9599	9828.78	12402.6
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	ANELKATIDQNLEDLRSR	ANELKATIDQNLEDLRSR	3	ANELKATIDQNLEDLRSR3	4970.63	7198.28	3531.53
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	ANELKATIDQNLEDLRSR	ANELKATIDQNLEDLRSR	4	ANELKATIDQNLEDLRSR4	2665.8	3340.81	9647.28
Q02353	Q02353	NDST1_RAT	Ndst1	Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1	1	ANENSLLSAQLK	ANENSLLSAQLK	2	ANENSLLSAQLK2	2840.78		
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	ANEPSPGEGDSNCVTR	ANEPSPGEGDSNC(UniMod:4)VTR	2	ANEPSPGEGDSNC(UniMod:4)VTR2	1.63249e+06	1.21354e+06	1.09603e+06
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	ANEPSPGEGDSNCVTR	ANEPSPGEGDSNC(UniMod:4)VTR	3	ANEPSPGEGDSNC(UniMod:4)VTR3	45650.9	34517	37724.5
A0A8J8YNR6	A0A8J8YNR6	A0A8J8YNR6_RAT	Fxr2	FMR1 autosomal homolog 2	1	ANEQEPCGWWLAR	ANEQEPC(UniMod:4)GWWLAR	2	ANEQEPC(UniMod:4)GWWLAR2	11529.1		9494.37
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	ANEQLGLTSMHTLWFR	ANEQLGLTSMHTLWFR	3	ANEQLGLTSMHTLWFR3	14866	8800.89	24304
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	ANETAVDR	ANETAVDR	2	ANETAVDR2			9373.01
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	ANEVEQMIR	ANEVEQMIR	2	ANEVEQMIR2	266844	297666	294439
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	ANEVISK	ANEVISK	2	ANEVISK2	1686.85	477209	
Q6AXR4	Q6AXR4	HEXB_RAT	Hexb	Beta-hexosaminidase subunit beta	1	ANEVWGALR	ANEVWGALR	2	ANEVWGALR2	15933	12270.5	7683.86
O88483	O88483	PDP1_RAT	Pdp1	[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial	1	ANEYSFK	ANEYSFK	2	ANEYSFK2	3191.35	4229.46	
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	ANFDVIR	ANFDVIR	2	ANFDVIR2	12893.8	9209.21	10550
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	ANFENLAK	ANFENLAK	1	ANFENLAK1	7271.75	4326.72	10757.3
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	ANFENLAK	ANFENLAK	2	ANFENLAK2	907028	972589	1.0024e+06
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	ANFGSRPFAYAEGQAHR	ANFGSRPFAYAEGQAHR	3	ANFGSRPFAYAEGQAHR3	5439.39	8385.19	
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	ANFGSRPFAYAEGQAHR	ANFGSRPFAYAEGQAHR	4	ANFGSRPFAYAEGQAHR4	3828.06		9043.98
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	ANFIEADK	ANFIEADK	2	ANFIEADK2	22588.1	34896.1	25990.4
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	ANFIEADKYFLPFELACQSK	ANFIEADKYFLPFELAC(UniMod:4)QSK	3	ANFIEADKYFLPFELAC(UniMod:4)QSK3	10739.1	29175.8	19869.7
Q62931	Q62931	GOSR1_RAT	Gosr1	Golgi SNAP receptor complex member 1	1	ANFMAIR	ANFMAIR	2	ANFMAIR2	41140	32061.5	47159.4
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	ANFPIVPPVAVLPLGTGNDLAR	ANFPIVPPVAVLPLGTGNDLAR	3	ANFPIVPPVAVLPLGTGNDLAR3		8197.41	
M0R8A3	M0R8A3	M0R8A3_RAT	Gp6	Glycoprotein 6 (platelet)	1	ANFPVITVTAAHSGTYR	ANFPVITVTAAHSGTYR	2	ANFPVITVTAAHSGTYR2	14487	12144.4	15436.2
M0R8A3	M0R8A3	M0R8A3_RAT	Gp6	Glycoprotein 6 (platelet)	1	ANFPVITVTAAHSGTYR	ANFPVITVTAAHSGTYR	3	ANFPVITVTAAHSGTYR3	100389	84820.3	105684
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	ANFSEIAK	ANFSEIAK	1	ANFSEIAK1	1106.33	2058.08	
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	ANFSEIAK	ANFSEIAK	2	ANFSEIAK2	139271	164980	139703
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	ANFSNMTSER	ANFSNMTSER	2	ANFSNMTSER2	131585	112958	109564
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	ANFVANDLDWLLALPHDK	ANFVANDLDWLLALPHDK	3	ANFVANDLDWLLALPHDK3	7856.25		20120.4
Q4AE70	Q4AE70	CARM1_RAT	Carm1	Histone-arginine methyltransferase CARM1	1	ANFWYQPSFHGVDLSALR	ANFWYQPSFHGVDLSALR	3	ANFWYQPSFHGVDLSALR3	8266.66	8941.08	18364.6
A0A8I6A4U0	P20767;A0A8I6A4U0;A0A8I5ZZL6	A0A8I6A4U0_RAT	ENSRNOG00000064589	Ig-like domain-containing protein	0	ANGAPISQGVDTANPTK	ANGAPISQGVDTANPTK	2	ANGAPISQGVDTANPTK2	1.59813e+06	1.53329e+06	1.55199e+06
A0A8I6A4U0	P20767;A0A8I6A4U0;A0A8I5ZZL6	A0A8I6A4U0_RAT	ENSRNOG00000064589	Ig-like domain-containing protein	0	ANGAPISQGVDTANPTK	ANGAPISQGVDTANPTK	3	ANGAPISQGVDTANPTK3	76093	62072	69742.5
P28840	P28840	NEC1_RAT	Pcsk1	Neuroendocrine convertase 1	1	ANGEVIVEIPTR	ANGEVIVEIPTR	2	ANGEVIVEIPTR2	4027.59	6341.76	4125.44
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	ANGHLLLNSEK	ANGHLLLNSEK	3	ANGHLLLNSEK3	7660.99	7020.22	13464.3
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	ANGLISAWK	ANGLISAWK	2	ANGLISAWK2		7178	8422.24
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	ANGLVSADEESYGALYEATVETTR	ANGLVSADEESYGALYEATVETTR	3	ANGLVSADEESYGALYEATVETTR3	7533.03	7808.84	11606.9
P54001	P54001	P4HA1_RAT	P4ha1	Prolyl 4-hydroxylase subunit alpha-1	1	ANGNLVYFEYIMSK	ANGNLVYFEYIMSK	2	ANGNLVYFEYIMSK2	7262.13		9017.23
P23640	P23640	RB27A_RAT	Rab27a	Ras-related protein Rab-27A	1	ANGPDGTVGR	ANGPDGTVGR	2	ANGPDGTVGR2	32815.8	25808	23915.1
D4AE42;M0RE23	M0RE23;D4AE42	D4AE42_RAT;M0RE23_RAT	Rpl26-ps1;Rpl26-ps9	Ribosomal protein L26, pseudogene 1	0	ANGTTVHVGIHPSK	ANGTTVHVGIHPSK	3	ANGTTVHVGIHPSK3	6972.87	4030.86	
A0A0G2K828	A0A0G2K828	A0A0G2K828_RAT	ENSRNOG00000066380	Ig-like domain-containing protein	1	ANGYTTEYNPSVK	ANGYTTEYNPSVK	2	ANGYTTEYNPSVK2	89108.5	77258	86169.5
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	ANHLGDTDGTPVK	ANHLGDTDGTPVK	2	ANHLGDTDGTPVK2	1268.96	5056.44	4664.58
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	ANHLGDTDGTPVK	ANHLGDTDGTPVK	3	ANHLGDTDGTPVK3	11781.4	12147.9	9944.76
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	ANHPMDAEVTK	ANHPMDAEVTK	2	ANHPMDAEVTK2	14991.7	8589.37	9558.72
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	ANHPMDAEVTK	ANHPMDAEVTK	3	ANHPMDAEVTK3	29676.4	24897.8	25131.3
Q561R9	Q561R9	LACB2_RAT	Lactb2	Endoribonuclease LACTB2	1	ANIIYPGHGPVIHNAEAK	ANIIYPGHGPVIHNAEAK	4	ANIIYPGHGPVIHNAEAK4		5949.96	
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	ANILEDSYR	ANILEDSYR	2	ANILEDSYR2	263587	271058	236393
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	ANILEDSYRR	ANILEDSYRR	3	ANILEDSYRR3	98914.8	148187	127019
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	ANILYAWAR	ANILYAWAR	2	ANILYAWAR2	105588	116693	105413
P35281	P35281	RAB10_RAT	Rab10	Ras-related protein Rab-10	1	ANINIEK	ANINIEK	1	ANINIEK1	15699.2	10171.1	11111.6
P35281	P35281	RAB10_RAT	Rab10	Ras-related protein Rab-10	1	ANINIEK	ANINIEK	2	ANINIEK2	747222	779572	835320
P35280	P35280	RAB8A_RAT	Rab8a	Ras-related protein Rab-8A	1	ANINVENAFFTLAR	ANINVENAFFTLAR	2	ANINVENAFFTLAR2	62672	65482.5	84637.2
P35280	P35280	RAB8A_RAT	Rab8a	Ras-related protein Rab-8A	1	ANINVENAFFTLAR	ANINVENAFFTLAR	3	ANINVENAFFTLAR3	44469.7	41299.3	49018.9
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	ANIPIMDTGENPEVPFPR	ANIPIMDTGENPEVPFPR	3	ANIPIMDTGENPEVPFPR3	19281.4	22470.8	19272
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	ANIPLYHGFK	ANIPLYHGFK	3	ANIPLYHGFK3	40685.4	56615.3	62485.4
B2RZB5	B2RZB5	B2RZB5_RAT	Chmp2a	Charged multivesicular body protein 2A	1	ANIQAVSLK	ANIQAVSLK	2	ANIQAVSLK2	32872.2	34600.8	34737.8
Q6P9U8	Q6P9U8	EIF3H_RAT	Eif3h	Eukaryotic translation initiation factor 3 subunit H	1	ANITFEHMFEEVPIVIK	ANITFEHMFEEVPIVIK	3	ANITFEHMFEEVPIVIK3	105032	88453.3	79877.4
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	ANIVHLMLSSPEQIQK	ANIVHLMLSSPEQIQK	3	ANIVHLMLSSPEQIQK3	20173.2	16510.2	12152.8
Q68FS4	A0A8I6B0E2;Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	0	ANKPGDVVR	ANKPGDVVR	2	ANKPGDVVR2	12201.5		25880.5
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	ANLAYGDFIK	ANLAYGDFIK	2	ANLAYGDFIK2	45717	60677.3	44890.1
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	ANLEAFTADK	ANLEAFTADK	2	ANLEAFTADK2	20354.8	13319.5	22095.9
A0A0G2JZH8	A0A0G2JZH8	A0A0G2JZH8_RAT	Pdhx	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	ANLENPMR	ANLENPMR	2	ANLENPMR2	30415.6	23847.8	24539.8
F1M943	F1M943	F1M943_RAT	Armc8	Armadillo repeat-containing protein 8	1	ANLIVLGAVPR	ANLIVLGAVPR	2	ANLIVLGAVPR2	19973.8	16317.7	22786.9
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	ANLLEIAPHLSAPLPIMLPLYK	ANLLEIAPHLSAPLPIMLPLYK	3	ANLLEIAPHLSAPLPIMLPLYK3	36556.6	33809.9	51409
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	ANLLNPPNTK	ANLLNPPNTK	2	ANLLNPPNTK2	51392	63015.8	43157.7
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	ANLNLENLLEATK	ANLNLENLLEATK	2	ANLNLENLLEATK2	8354.96	3440.48	
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	ANLPQSFQVDTSK	ANLPQSFQVDTSK	2	ANLPQSFQVDTSK2	1.12181e+07	1.15228e+07	1.28026e+07
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	ANLPQSFQVDTSK	ANLPQSFQVDTSK	3	ANLPQSFQVDTSK3	14319.5	23271.4	45383.5
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	ANLQELER	ANLQELER	1	ANLQELER1	2583.54	1078.91	
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	ANLQELER	ANLQELER	2	ANLQELER2	4.07705e+06	4.43849e+06	5.0448e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	ANLQIDQINTDLNLER	ANLQIDQINTDLNLER	2	ANLQIDQINTDLNLER2	6.63376e+06	6.745e+06	6.01471e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	ANLQIDQINTDLNLER	ANLQIDQINTDLNLER	3	ANLQIDQINTDLNLER3	1.68265e+06	1.96723e+06	1.91609e+06
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	ANLSLSAPFRPHIENSALDLSNYR	ANLSLSAPFRPHIENSALDLSNYR	3	ANLSLSAPFRPHIENSALDLSNYR3	5572.94		4329.17
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	ANLSLSAPFRPHIENSALDLSNYR	ANLSLSAPFRPHIENSALDLSNYR	4	ANLSLSAPFRPHIENSALDLSNYR4	15430.5	15727.6	15260.8
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	ANLSSQILK	ANLSSQILK	1	ANLSSQILK1	139464	183218	136822
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	ANLSSQILK	ANLSSQILK	2	ANLSSQILK2	1.15895e+07	1.38583e+07	1.28966e+07
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	ANLTERQEDGEFWMSFSDFLR	ANLTERQEDGEFWMSFSDFLR	3	ANLTERQEDGEFWMSFSDFLR3	30304	21506.4	22049.7
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	ANLTPGQIASYVAEK	ANLTPGQIASYVAEK	2	ANLTPGQIASYVAEK2	247027	218980	213864
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	ANLTPGQIASYVAEK	ANLTPGQIASYVAEK	3	ANLTPGQIASYVAEK3	26525	33808.2	39673.2
D3ZQI6	D3ZQI6	D3ZQI6_RAT	Xpo4	Exportin 4	1	ANLVIQCENWWNLAK	ANLVIQC(UniMod:4)ENWWNLAK	2	ANLVIQC(UniMod:4)ENWWNLAK2	6211.31	8559.6	3266.28
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	ANLVLLSGANEGR	ANLVLLSGANEGR	2	ANLVLLSGANEGR2	68280.5	80162.9	72504.9
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	ANMMPHANK	ANMMPHANK	2	ANMMPHANK2	3.26077e+06	3.96858e+06	3.54615e+06
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	ANMVVEVR	ANMVVEVR	2	ANMVVEVR2		19652.3	23502.5
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	ANNGICFLR	ANNGIC(UniMod:4)FLR	2	ANNGIC(UniMod:4)FLR2	16470.1	22257.5	19378.4
A0A0G2JST1	A0A0G2JST1	A0A0G2JST1_RAT	Adgrg6	Adhesion G protein-coupled receptor G6	1	ANNGYFLSISGAR	ANNGYFLSISGAR	2	ANNGYFLSISGAR2	7319.92	6190.78	4969.05
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	ANNLHSGDNFQLNDSEIER	ANNLHSGDNFQLNDSEIER	3	ANNLHSGDNFQLNDSEIER3	14364.4	17330	12886.8
Q4KM74	Q4KM74	SC22B_RAT	Sec22b	Vesicle-trafficking protein SEC22b	1	ANNLSSLSK	ANNLSSLSK	1	ANNLSSLSK1	1828.25	4248.41	3598.48
Q4KM74	Q4KM74	SC22B_RAT	Sec22b	Vesicle-trafficking protein SEC22b	1	ANNLSSLSK	ANNLSSLSK	2	ANNLSSLSK2	205662	196537	219446
O88959	O88959	INHBE_RAT	Inhbe	Inhibin beta E chain	1	ANNPWPAGSSCCVPTAR	ANNPWPAGSSC(UniMod:4)C(UniMod:4)VPTAR	2	ANNPWPAGSSC(UniMod:4)C(UniMod:4)VPTAR2	36021.7	43767.9	36640.8
O88959	O88959	INHBE_RAT	Inhbe	Inhibin beta E chain	1	ANNPWPAGSSCCVPTAR	ANNPWPAGSSC(UniMod:4)C(UniMod:4)VPTAR	3	ANNPWPAGSSC(UniMod:4)C(UniMod:4)VPTAR3	13579.3	21721.8	15207.8
D4ADF6	D4ADF6	D4ADF6_RAT	Zfyve16	Zinc finger FYVE-type containing 16	1	ANNSVGDVLR	ANNSVGDVLR	2	ANNSVGDVLR2	4126.21		4957.39
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	ANNVDYTVHSVR	ANNVDYTVHSVR	2	ANNVDYTVHSVR2	8086.5	11720.3	9934.24
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	ANNVDYTVHSVR	ANNVDYTVHSVR	3	ANNVDYTVHSVR3	52966.4	52494.4	65941.3
Q9WTT2	Q9WTT2	CLPB_RAT	Clpb	Mitochondrial disaggregase	1	ANNVQEVR	ANNVQEVR	2	ANNVQEVR2	7775.47		5842.52
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	ANNVSPMTCLK	ANNVSPMTC(UniMod:4)LK	2	ANNVSPMTC(UniMod:4)LK2	13530.8	21706.1	13893.2
A0A8I6G7J3	A0A8I6G7J3	A0A8I6G7J3_RAT	ENSRNOG00000070816	Ig-like domain-containing protein	1	ANNYATYYGK	ANNYATYYGK	2	ANNYATYYGK2	43254.4	53906.6	43000.4
M0RBH1	M0RBH1	M0RBH1_RAT	Apol2	Apolipoprotein L, 2	1	ANPALAASVK	ANPALAASVK	2	ANPALAASVK2	11898.6	9579.34	13263.3
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	ANPFFVLQR	ANPFFVLQR	2	ANPFFVLQR2	45130.8	123929	51157.2
P62268	A0A8I6GC09;P62268	RS23_RAT	Rps23	Small ribosomal subunit protein uS12	0	ANPFGGASHAK	ANPFGGASHAK	2	ANPFGGASHAK2	33997.3	33512.7	24365
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	ANPGAWILR	ANPGAWILR	2	ANPGAWILR2	552952	531159	509107
Q7TP48	Q7TP48	APMAP_RAT	Apmap	Adipocyte plasma membrane-associated protein	1	ANPGFSMLDFLSDKPFIK	ANPGFSMLDFLSDKPFIK	3	ANPGFSMLDFLSDKPFIK3	15320.2	23566.4	36571.1
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	ANPGNFPWQAFTNIHGR	ANPGNFPWQAFTNIHGR	2	ANPGNFPWQAFTNIHGR2	145718	107484	77485.8
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	ANPGNFPWQAFTNIHGR	ANPGNFPWQAFTNIHGR	3	ANPGNFPWQAFTNIHGR3	823128	628493	518565
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	ANPLAYGISHK	ANPLAYGISHK	2	ANPLAYGISHK2	4076.6	7114.43	5251.73
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	ANPLAYGISHK	ANPLAYGISHK	3	ANPLAYGISHK3	16616.7	25535.5	34941.3
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	ANPPAVTFELTGETDGIFK	ANPPAVTFELTGETDGIFK	3	ANPPAVTFELTGETDGIFK3	21222	11276.8	20234.3
Q5FVL6	Q5U1V9;Q5FVL6	TSN13_RAT	Tspan13	Tetraspanin-13	0	ANPSAFL	ANPSAFL	1	ANPSAFL1	127168	114467	120493
A0A0G2K2Z2	A0A0G2K2Z2	A0A0G2K2Z2_RAT	Inpp5k	Inositol polyphosphate-5-phosphatase K	1	ANPSGFLLTQK	ANPSGFLLTQK	2	ANPSGFLLTQK2	18609.5	15193.4	18796.4
Q5PPI8	Q5PPI8	Q5PPI8_RAT	Rmc1	Regulator of MON1-CCZ1	1	ANPVNCVFFDEANK	ANPVNC(UniMod:4)VFFDEANK	2	ANPVNC(UniMod:4)VFFDEANK2	14530.3	5464.69	13842.1
P05506	P05506	NU3M_RAT	mt-Nd3	NADH-ubiquinone oxidoreductase chain 3	1	ANPYECGFDPTSSAR	ANPYEC(UniMod:4)GFDPTSSAR	2	ANPYEC(UniMod:4)GFDPTSSAR2	29083.4	34475.3	29176.1
D3ZAR1	D3ZAR1	ARH_RAT	Ldlrap1	Low density lipoprotein receptor adapter protein 1	1	ANQEGGDVPGTR	ANQEGGDVPGTR	2	ANQEGGDVPGTR2	55778.4	47193.4	59601.5
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	ANQIGLVLLR	ANQIGLVLLR	2	ANQIGLVLLR2	3802.27	9013.91	1883.7
Q9EQG6	Q9EQG6	KDIS_RAT	Kidins220	Kinase D-interacting substrate of 220 kDa	1	ANQITFNWDR	ANQITFNWDR	2	ANQITFNWDR2	557.811	2421.3	2894.45
A0A8I6ATU9	A0A8I6ATU9	A0A8I6ATU9_RAT	Atxn2	Ataxin 2	1	ANQLAEEIESSAQYK	ANQLAEEIESSAQYK	2	ANQLAEEIESSAQYK2	4000.55	6736.01	
A0A8I5Y120	A0A8I5Y120	A0A8I5Y120_RAT	Brap	BRCA1 associated protein	1	ANQLLLQNK	ANQLLLQNK	2	ANQLLLQNK2	2412.71	3569.48	3679.28
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	ANQQETEMFYFTK	ANQQETEMFYFTK	2	ANQQETEMFYFTK2	27958.6	38644.4	32750.4
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	ANQQETEQFYFTK	ANQQETEQFYFTK	2	ANQQETEQFYFTK2	12513.9	17686.4	12592.5
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	ANQVTFLCSNIIHFESLR	ANQVTFLC(UniMod:4)SNIIHFESLR	3	ANQVTFLC(UniMod:4)SNIIHFESLR3		3829.1	16567.3
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	ANRPFLVLIR	ANRPFLVLIR	2	ANRPFLVLIR2	9000.69	10607.5	8416.93
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	ANRPFLVLIR	ANRPFLVLIR	3	ANRPFLVLIR3	671899	632232	651191
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	ANRPFLVLIREVALNTIIFMGR	ANRPFLVLIREVALNTIIFMGR	4	ANRPFLVLIREVALNTIIFMGR4	6838.32		
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	ANSEEFIPIFANNPR	ANSEEFIPIFANNPR	2	ANSEEFIPIFANNPR2	22754.3	23439.3	20511.8
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	ANSEEFIPIFANNPR	ANSEEFIPIFANNPR	3	ANSEEFIPIFANNPR3	4313.06		7232.93
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	ANSFLGQK	ANSFLGQK	1	ANSFLGQK1	509760	726261	806251
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	ANSFLGQK	ANSFLGQK	2	ANSFLGQK2	221462	200178	183969
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	ANSFLGQKASAGLLGAHASAITAYALTLTK	ANSFLGQKASAGLLGAHASAITAYALTLTK	4	ANSFLGQKASAGLLGAHASAITAYALTLTK4	13995.7	16183.7	13484.2
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	ANSFTVSSVSAPSWLHR	ANSFTVSSVSAPSWLHR	3	ANSFTVSSVSAPSWLHR3	17840.6	13312.4	7544.88
P18292	P18292	THRB_RAT	F2	Prothrombin	1	ANSGFLEELRK	ANSGFLEELRK	3	ANSGFLEELRK3	18513.9	33761.1	17200.7
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	ANSHILK	ANSHILK	1	ANSHILK1	947845	842737	702993
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	ANSHILK	ANSHILK	2	ANSHILK2	6.69372e+06	6.23788e+06	6.56687e+06
D3ZGJ0	D3ZGJ0	D3ZGJ0_RAT	Dhx32	DEAH-box helicase 32 (putative)	1	ANSLVLQPISQSQAEIR	ANSLVLQPISQSQAEIR	2	ANSLVLQPISQSQAEIR2	4323.93	4766.47	4814.01
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	ANSMEGLMPR	ANSMEGLMPR	2	ANSMEGLMPR2	301059	312737	340143
P0C5W1	P0C5W1	MAP1S_RAT	Map1s	Microtubule-associated protein 1S	1	ANSQDSLASR	ANSQDSLASR	2	ANSQDSLASR2	26298.4	24946.9	24594.6
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	ANSSVVSVNCK	ANSSVVSVNC(UniMod:4)K	2	ANSSVVSVNC(UniMod:4)K2	39378.4	42075.6	47462.2
Q6AXS4	Q6AXS4	RENR_RAT	Atp6ap2	Renin receptor	1	ANSVFEDLSVTLR	ANSVFEDLSVTLR	2	ANSVFEDLSVTLR2	11024.4	8347.08	7130.81
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	ANSWQLVETPEK	ANSWQLVETPEK	2	ANSWQLVETPEK2	94359.8	89206.5	90282.5
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	ANSWQLVETPEKR	ANSWQLVETPEKR	2	ANSWQLVETPEKR2	1928.13	2210.37	4175.22
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	ANSWQLVETPEKR	ANSWQLVETPEKR	3	ANSWQLVETPEKR3	17511	11006.3	15292.7
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	ANSWWLR	ANSWWLR	2	ANSWWLR2	34148.8	35631.6	40922.4
F1LWD0	F1LWD0	F1LWD0_RAT	AABR07065782.1	Ig-like domain-containing protein	1	ANSYTTEYNPSVK	ANSYTTEYNPSVK	2	ANSYTTEYNPSVK2	217396	207077	189478
Q4KLZ6	Q4KLZ6	TKFC_RAT	Tkfc	Triokinase/FMN cyclase	1	ANTDLPAWSAAMDAGLK	ANTDLPAWSAAMDAGLK	2	ANTDLPAWSAAMDAGLK2	7142.17	5387.37	
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	ANTDTAELGIQVCALTAEKDR	ANTDTAELGIQVC(UniMod:4)ALTAEKDR	3	ANTDTAELGIQVC(UniMod:4)ALTAEKDR3	28376.1	29386.8	30235.1
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	ANTENWSK	ANTENWSK	2	ANTENWSK2	4266.77		5077.9
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	ANTEPIPK	ANTEPIPK	2	ANTEPIPK2	21503.5	15260.2	22043.1
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	ANTFVAELK	ANTFVAELK	2	ANTFVAELK2	531235	600640	557510
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	ANTFYRPGLPFFGQVLLVDEK	ANTFYRPGLPFFGQVLLVDEK	3	ANTFYRPGLPFFGQVLLVDEK3	2.23769e+06	2.32072e+06	2.26642e+06
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	ANTFYRPGLPFFGQVLLVDEK	ANTFYRPGLPFFGQVLLVDEK	4	ANTFYRPGLPFFGQVLLVDEK4	181089	115936	84445.1
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	ANTFYRPGLPFFGQVLLVDEKGQPIPNK	ANTFYRPGLPFFGQVLLVDEKGQPIPNK	4	ANTFYRPGLPFFGQVLLVDEKGQPIPNK4	54542.1	70128	65354.5
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	ANTLSHFPVECPAPPEPAQTSPGVSQR	ANTLSHFPVEC(UniMod:4)PAPPEPAQTSPGVSQR	3	ANTLSHFPVEC(UniMod:4)PAPPEPAQTSPGVSQR3	39220.1	26480.3	24113.5
D3Z8F6	D3Z8F6	D3Z8F6_RAT	Dennd1b	DENN domain containing 1B	1	ANTPVHLSVHSCFITPDITGLPTIPESR	ANTPVHLSVHSC(UniMod:4)FITPDITGLPTIPESR	4	ANTPVHLSVHSC(UniMod:4)FITPDITGLPTIPESR4	16053.4	24737.8	15961.2
Q9Z2X5	Q9Z2X5	HOME3_RAT	Homer3	Homer protein homolog 3	1	ANTVYGLGFGSEQQLTQFAEK	ANTVYGLGFGSEQQLTQFAEK	3	ANTVYGLGFGSEQQLTQFAEK3	5217.97	9248.21	5987.32
P15589	P15589	STS_RAT	Sts	Steryl-sulfatase	1	ANTWEGGIR	ANTWEGGIR	2	ANTWEGGIR2	6410.15	5806.37	8586.97
P31399	P31399	ATP5H_RAT	Atp5pd	ATP synthase subunit d, mitochondrial	1	ANVDKPGLVDDFK	ANVDKPGLVDDFK	2	ANVDKPGLVDDFK2	48702.7	41935.9	34851.7
P31399	P31399	ATP5H_RAT	Atp5pd	ATP synthase subunit d, mitochondrial	1	ANVDKPGLVDDFK	ANVDKPGLVDDFK	3	ANVDKPGLVDDFK3	401064	365514	460678
P31399	P31399	ATP5H_RAT	Atp5pd	ATP synthase subunit d, mitochondrial	1	ANVDKPGLVDDFKNK	ANVDKPGLVDDFKNK	3	ANVDKPGLVDDFKNK3	23342.2	23948.7	14903.8
P31399	P31399	ATP5H_RAT	Atp5pd	ATP synthase subunit d, mitochondrial	1	ANVDKPGLVDDFKNK	ANVDKPGLVDDFKNK	4	ANVDKPGLVDDFKNK4	21679.3	29736.8	22121
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	ANVEHMTEK	ANVEHMTEK	2	ANVEHMTEK2	17488.3		16575.3
Q9R064	O35254;Q9R064	GORS2_RAT	Gorasp2	Golgi reassembly-stacking protein 2	0	ANVEKPVK	ANVEKPVK	2	ANVEKPVK2			44709.7
M0RCS2	M0RCS2	M0RCS2_RAT	Tbl2	Transducin (beta)-like 2	1	ANVELDHATLVR	ANVELDHATLVR	3	ANVELDHATLVR3	21024.3	19554.3	22580.9
D3ZGA5	D3ZGA5	D3ZGA5_RAT	Rilp	Rab interacting lysosomal protein	1	ANVFLLK	ANVFLLK	2	ANVFLLK2	6518.19	7703.05	5372.09
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	ANVFVHLPR	ANVFVHLPR	2	ANVFVHLPR2	1.06389e+06	1.32762e+06	839060
P36953	P36953	AFAM_RAT	Afm	Afamin	1	ANVGFLPPFPTLDPEEK	ANVGFLPPFPTLDPEEK	2	ANVGFLPPFPTLDPEEK2	139165	101636	112425
P36953	P36953	AFAM_RAT	Afm	Afamin	1	ANVGFLPPFPTLDPEEK	ANVGFLPPFPTLDPEEK	3	ANVGFLPPFPTLDPEEK3	5304.59	7945.78	13805.1
D3ZGE9	M0R7T6;D3ZGE9	D3ZGE9_RAT	Rbm38	RNA binding motif protein 38	0	ANVNLAYLGAK	ANVNLAYLGAK	2	ANVNLAYLGAK2	33140.2	31814.4	27496.1
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	ANVNSTITVTMK	ANVNSTITVTMK	2	ANVNSTITVTMK2	1043.97	2885.33	
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	ANVQLQQYLADLHEAEAWIK	ANVQLQQYLADLHEAEAWIK	3	ANVQLQQYLADLHEAEAWIK3	16417.8	6834.68	9400.54
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	ANVTPQSSSELRPTTTAALGSGQEAK	ANVTPQSSSELRPTTTAALGSGQEAK	3	ANVTPQSSSELRPTTTAALGSGQEAK3	21932.7	33191.1	18939.9
Q9ET64	Q9ET64	NSMA_RAT	Smpd2	Sphingomyelin phosphodiesterase 2	1	ANVVLLCGDLNMHPK	ANVVLLC(UniMod:4)GDLNMHPK	3	ANVVLLC(UniMod:4)GDLNMHPK3	8417.62	14062.8	17713.2
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	ANVVPEALQQFAR	ANVVPEALQQFAR	2	ANVVPEALQQFAR2	35871.4	41438.4	40266.6
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	ANVVSNVR	ANVVSNVR	2	ANVVSNVR2	122169	92016.6	108989
Q9WVC0	Q9WVC0;A0A0G2JV25;A0A8I6ARI4	SEPT7_RAT	Septin7	Septin-7	0	ANWEAQQR	ANWEAQQR	2	ANWEAQQR2	105159	81366.5	122868
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	ANWYFVLTR	ANWYFVLTR	2	ANWYFVLTR2	96810.6	103414	88673.2
A0A8I5ZM80	A0A8I5ZM80	A0A8I5ZM80_RAT	Armh3	Armadillo-like helical domain containing 3	1	ANYDTLTLK	ANYDTLTLK	2	ANYDTLTLK2	3669.99	7824.36	6745.38
Q9WTV5	Q9WTV5	PSMD9_RAT	Psmd9	26S proteasome non-ATPase regulatory subunit 9	1	ANYDVLESQK	ANYDVLESQK	2	ANYDVLESQK2	36075.7	34667.6	29995
Q64244	Q64244	CD38_RAT	Cd38	ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1	1	ANYEFSQVSEDRPGCR	ANYEFSQVSEDRPGC(UniMod:4)R	3	ANYEFSQVSEDRPGC(UniMod:4)R3	36159	49228.5	19602.5
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	ANYIAANGVFHTVTALR	ANYIAANGVFHTVTALR	3	ANYIAANGVFHTVTALR3	9310.12	2558.34	9649.21
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	ANYQADLANITCEIAIK	ANYQADLANITC(UniMod:4)EIAIK	3	ANYQADLANITC(UniMod:4)EIAIK3		7227.86	
D3ZY47	D3ZY47	D3ZY47_RAT	C19h1orf198	Similar to RIKEN cDNA 2310022B05	1	APAAAADAGDVQDPER	APAAAADAGDVQDPER	2	APAAAADAGDVQDPER2	1698.39	1766.38	3715.76
D3ZY47	D3ZY47	D3ZY47_RAT	C19h1orf198	Similar to RIKEN cDNA 2310022B05	1	APAAAADAGDVQDPERFPGLR	APAAAADAGDVQDPERFPGLR	3	APAAAADAGDVQDPERFPGLR3	17766.9	12546.4	18081.5
P52759	P52759	RIDA_RAT	Rida	2-iminobutanoate/2-iminopropanoate deaminase	1	APAAIGAYSQAVLVDR	APAAIGAYSQAVLVDR	2	APAAIGAYSQAVLVDR2	13259.8	10998.7	17706.1
A0A8I6B124	A0A8I6B124	A0A8I6B124_RAT	Zswim8	Zinc finger, SWIM-type containing 8	1	APAFHQLVQR	APAFHQLVQR	3	APAFHQLVQR3	5967.28	3549.95	
Q5BJX1	Q5BJX1;D3ZH23	RM41_RAT	Mrpl41	Large ribosomal subunit protein mL41	0	APAGIDTPLTAK	APAGIDTPLTAK	2	APAGIDTPLTAK2	1704.61	8170.18	2108.39
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	APAGILNGK	APAGILNGK	2	APAGILNGK2	23398.5	36787.3	28137.5
B5DF57	B5DF57	B5DF57_RAT	Epb42	protein-glutamine gamma-glutamyltransferase	1	APAHIFLSALK	APAHIFLSALK	3	APAHIFLSALK3	4389.52	4543.43	
P49242	P49242;A0A8I6AVI0;M0R6L4	RS3A_RAT	Rps3a	Small ribosomal subunit protein eS1	0	APAMFNIR	APAMFNIR	2	APAMFNIR2	34742.3	34565.2	25352.5
A0A0G2JYX9	A0A0G2JYX9	A0A0G2JYX9_RAT	Irak1	Interleukin-1 receptor-associated kinase 1	1	APAQAAQQLQR	APAQAAQQLQR	2	APAQAAQQLQR2	6923.43	4676.62	6037.28
P80386	P80386	AAKB1_RAT	Prkab1	5'-AMP-activated protein kinase subunit beta-1	1	APAQARPTVFR	APAQARPTVFR	3	APAQARPTVFR3	40216.7	58849.8	71116.3
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	APAQLCEGCPLQGLHK	APAQLC(UniMod:4)EGC(UniMod:4)PLQGLHK	3	APAQLC(UniMod:4)EGC(UniMod:4)PLQGLHK3	24506.3	28176.9	24334.4
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	APASATENAR	APASATENAR	2	APASATENAR2			9477.79
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	APASPAAIR	APASPAAIR	2	APASPAAIR2	50696.1	52256.8	40468.1
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	APASSQAPVPVK	APASSQAPVPVK	2	APASSQAPVPVK2	34239	42359	38558.8
D4A731	D4A731	D4A731_RAT	Ankib1	RBR-type E3 ubiquitin transferase	1	APAVDCGK	APAVDC(UniMod:4)GK	2	APAVDC(UniMod:4)GK2			21544.8
Q7TT47	Q7TT47	SPG7_RAT	Spg7	Paraplegin	1	APCIVYIDEIDAVGK	APC(UniMod:4)IVYIDEIDAVGK	2	APC(UniMod:4)IVYIDEIDAVGK2		1463.13	
D4A2G6	D4A2G6	D4A2G6_RAT	Thbs2	Thrombospondin 2	1	APCPIDGR	APC(UniMod:4)PIDGR	2	APC(UniMod:4)PIDGR2	58643.2	43007.7	35844.2
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	APCQAAQELLQSLLGSVSCHMLNMK	APC(UniMod:4)QAAQELLQSLLGSVSC(UniMod:4)HMLNMK	3	APC(UniMod:4)QAAQELLQSLLGSVSC(UniMod:4)HMLNMK3		6928.46	6797.87
Q5XI86	Q5XI86	Q5XI86_RAT	Ptrh2	aminoacyl-tRNA hydrolase	1	APDEDSLIQLLTHAK	APDEDSLIQLLTHAK	3	APDEDSLIQLLTHAK3	58425.5	60326.3	66993.5
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	APDELHYTYLDTFGR	APDELHYTYLDTFGR	2	APDELHYTYLDTFGR2		1172.62	2751.41
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	APDELHYTYLDTFGR	APDELHYTYLDTFGR	3	APDELHYTYLDTFGR3	19755.9	15008.6	12144.8
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	APDELHYTYLDTFGRPVIVAYK	APDELHYTYLDTFGRPVIVAYK	3	APDELHYTYLDTFGRPVIVAYK3	26726.3	21100.7	11871.9
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	APDELHYTYLDTFGRPVIVAYK	APDELHYTYLDTFGRPVIVAYK	4	APDELHYTYLDTFGRPVIVAYK4	124181	136157	153526
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	APDELHYTYLDTFGRPVIVAYKK	APDELHYTYLDTFGRPVIVAYKK	4	APDELHYTYLDTFGRPVIVAYKK4	10201.4	15167.6	8574.59
F7FLA1	F7FLA1	F7FLA1_RAT	Slc35b2	Solute carrier family 35 member B2	1	APDEVPLAPR	APDEVPLAPR	2	APDEVPLAPR2	43611.2	43258.7	46824.1
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	APDFNEEHLR	APDFNEEHLR	3	APDFNEEHLR3	17927.6	13886.7	22859.1
O35763	O35763;P31977;Q5PQK5	MOES_RAT	Msn	Moesin	0	APDFVFYAPR	APDFVFYAPR	2	APDFVFYAPR2	119730	99045.3	126529
D3ZE20	D3ZE20	D3ZE20_RAT	Nfatc1	Nuclear factor of activated T-cells 1	1	APDGHHVWEMEAK	APDGHHVWEMEAK	3	APDGHHVWEMEAK3	4626.18	5084.42	8773.88
O70595	O70595	ABCB6_RAT	Abcb6	ATP-binding cassette sub-family B member 6	1	APDIILLDEATSALDTSNER	APDIILLDEATSALDTSNER	3	APDIILLDEATSALDTSNER3	13597.3	11543.8	11938.6
A0A0G2K6C7	A0A0G2K6C7	A0A0G2K6C7_RAT	Trim5	Tripartite motif-containing 5	1	APDLQGMLQVLQEVTEAQR	APDLQGMLQVLQEVTEAQR	3	APDLQGMLQVLQEVTEAQR3	28176.7	1583.76	4021.61
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	APDLSPEGLLSLK	APDLSPEGLLSLK	2	APDLSPEGLLSLK2	22221.7	25859.1	38394
F1M784	F1M784	F1M784_RAT	Pik3ap1	Phosphoinositide-3-kinase adaptor protein 1	1	APDLSSGNVSLK	APDLSSGNVSLK	2	APDLSSGNVSLK2	14312.3	9628.02	8005.32
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	APDMAPEEVDESK	APDMAPEEVDESK	2	APDMAPEEVDESK2	20743	27519.8	15212.2
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	APDNPFHGIVSK	APDNPFHGIVSK	3	APDNPFHGIVSK3	16571.3	13949.2	9264.4
Q9Z2Q7	Q9Z2Q7	STX8_RAT	Stx8	Syntaxin-8	1	APDPWFSTYDSTCQIAQEIAEK	APDPWFSTYDSTC(UniMod:4)QIAQEIAEK	3	APDPWFSTYDSTC(UniMod:4)QIAQEIAEK3	17103.2	15705.3	15305.4
Q62720	Q62720	ZNT1_RAT	Slc30a1	Proton-coupled zinc antiporter SLC30A1	1	APDQEPDQEETNTLVANTSNSNGLK	APDQEPDQEETNTLVANTSNSNGLK	3	APDQEPDQEETNTLVANTSNSNGLK3	2167.41		2724.41
P58751	P58751	RELN_RAT	Reln	Reelin	1	APDQPGEGVLLHYSYDNGITWK	APDQPGEGVLLHYSYDNGITWK	3	APDQPGEGVLLHYSYDNGITWK3	58154.5	40067.9	60981.9
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	APDSYVVK	APDSYVVK	2	APDSYVVK2	77241.7	60394.4	59339.6
P53565	P53565;A0A8I5ZR58	CUX1_RAT	Cux1	Homeobox protein cut-like 1	0	APDVAIEVLTR	APDVAIEVLTR	2	APDVAIEVLTR2	8952.64	4194.23	8847.65
A0A8I6GKB1	A0A8I6GKB1	A0A8I6GKB1_RAT	Mocs1	Molybdenum cofactor synthesis 1	1	APDVPSGPGPTSDQLTHVDSAGR	APDVPSGPGPTSDQLTHVDSAGR	3	APDVPSGPGPTSDQLTHVDSAGR3	6930.4		9751.9
A0A0G2JUA5	A0A0G2JUA5	A0A0G2JUA5_RAT	Ahnak	AHNAK nucleoprotein	1	APDVQLNAPDVDVHGQEWNLK	APDVQLNAPDVDVHGQEWNLK	3	APDVQLNAPDVDVHGQEWNLK3			9816.93
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	APDVQTVAGEVMGPQRPR	APDVQTVAGEVMGPQRPR	3	APDVQTVAGEVMGPQRPR3	173580	134915	132315
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	APDVTADMGR	APDVTADMGR	2	APDVTADMGR2	57510.2	51882	40772.9
Q8CGU6	Q8CGU6	NICA_RAT	Ncstn	Nicastrin	1	APDVTTLPR	APDVTTLPR	2	APDVTTLPR2	69557.6	68866.1	76032.6
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	APDWVDAEECHR	APDWVDAEEC(UniMod:4)HR	2	APDWVDAEEC(UniMod:4)HR2		2406.57	4793.75
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	APDWVDAEECHR	APDWVDAEEC(UniMod:4)HR	3	APDWVDAEEC(UniMod:4)HR3	17781.7	27487.2	19840.9
Q3B7U1	Q3B7U1	Q3B7U1_RAT	Maged2	MAGE family member D2	1	APEASEAAATQASPTTQLSETQVLAAENK	APEASEAAATQASPTTQLSETQVLAAENK	3	APEASEAAATQASPTTQLSETQVLAAENK3	9109.3	3709.08	6938.67
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	APEDLAFLR	APEDLAFLR	2	APEDLAFLR2	64134.4	63154.6	77396.6
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	APEDLAFLRR	APEDLAFLRR	3	APEDLAFLRR3	7469.33	9488.87	11377.9
A0A0G2KA92	A0A0G2KA92	A0A0G2KA92_RAT	Chd2	DNA helicase	1	APEDSER	APEDSER	1	APEDSER1			1209.34
A0A0G2KA92	A0A0G2KA92	A0A0G2KA92_RAT	Chd2	DNA helicase	1	APEDSER	APEDSER	2	APEDSER2			113389
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	APEEEVAFDFYHK	APEEEVAFDFYHK	3	APEEEVAFDFYHK3	16843.8	26241.8	27484.7
Q9EPF2	Q9EPF2	MUC18_RAT	Mcam	Cell surface glycoprotein MUC18	1	APEEPTIQANVLGIHVDIQELK	APEEPTIQANVLGIHVDIQELK	3	APEEPTIQANVLGIHVDIQELK3	44615.6	30597.1	31119.3
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	APEFLPEVPLGQLHDSYR	APEFLPEVPLGQLHDSYR	3	APEFLPEVPLGQLHDSYR3	29288.2	22807.9	18029.4
Q9QZR6	Q9QZR6	SEPT9_RAT	Septin9	Septin-9	1	APEGSAMPVTDAAPK	APEGSAMPVTDAAPK	2	APEGSAMPVTDAAPK2	2081.38	9103.07	3143.14
P63086	A0A8I6GKL7;P21708;P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	0	APEIMLNSK	APEIMLNSK	2	APEIMLNSK2	145989	123375	121428
Q925Q9	Q925Q9	SH3K1_RAT	Sh3kbp1	SH3 domain-containing kinase-binding protein 1	1	APEKPMHDVSSGNSLLSSETILR	APEKPMHDVSSGNSLLSSETILR	4	APEKPMHDVSSGNSLLSSETILR4	4297.58		
F7F067	F7F067	F7F067_RAT	Actr1b	Actin related protein 1B	1	APELLFQPDLVGDESEGLHEVLAFAIHK	APELLFQPDLVGDESEGLHEVLAFAIHK	4	APELLFQPDLVGDESEGLHEVLAFAIHK4	15199.3	13957.8	10142.6
P85515	P85515	ACTZ_RAT	Actr1a	Alpha-centractin	1	APELLFRPDLIGEESEGIHEVLVFAIQK	APELLFRPDLIGEESEGIHEVLVFAIQK	4	APELLFRPDLIGEESEGIHEVLVFAIQK4	34642.9	36304.5	43282.9
Q5HZX7	Q5HZX7	LDAH_RAT	Ldah	Lipid droplet-associated hydrolase	1	APELPVVHTFLLFPTIER	APELPVVHTFLLFPTIER	3	APELPVVHTFLLFPTIER3	4431.62	1966.54	3047.79
A0A8I6GK59	A0A8I6GK59	A0A8I6GK59_RAT	Bmp2k	BMP-2 inducible kinase	1	APEMINLYGGKPITTK	APEMINLYGGKPITTK	3	APEMINLYGGKPITTK3	7805.97	3477.01	
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	APEMVNLYSGK	APEMVNLYSGK	2	APEMVNLYSGK2	147974	141660	134237
D3ZHC4	D3ZHC4	D3ZHC4_RAT	Hebp2	Heme binding protein 2	1	APENIDPQPGSYEIR	APENIDPQPGSYEIR	2	APENIDPQPGSYEIR2	19337.1	10719.4	12854.5
D3ZHC4	D3ZHC4	D3ZHC4_RAT	Hebp2	Heme binding protein 2	1	APENIDPQPGSYEIR	APENIDPQPGSYEIR	3	APENIDPQPGSYEIR3	3797.87		5234.2
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	APENPENGHSLGK	APENPENGHSLGK	2	APENPENGHSLGK2	2347.3	3493.48	
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	APENPENGHSLGK	APENPENGHSLGK	3	APENPENGHSLGK3	12461.3	7990.59	5757.51
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	APENQYSPTPGTDC	APENQYSPTPGTDC(UniMod:4)	2	APENQYSPTPGTDC(UniMod:4)2	165961	158271	179906
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	APEPVEIR	APEPVEIR	2	APEPVEIR2	527492	370205	347625
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	APESLFLLEEMR	APESLFLLEEMR	2	APESLFLLEEMR2	34850.5	24680.3	37858.5
Q3B7U1	Q3B7U1	Q3B7U1_RAT	Maged2	MAGE family member D2	1	APEVSEAAK	APEVSEAAK	2	APEVSEAAK2	146761	122660	104385
P62944	A0A8I5ZZX8;P62944	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	APEVSQYIYQVYDSILK	APEVSQYIYQVYDSILK	3	APEVSQYIYQVYDSILK3	8625.72		7169.08
P62944	A0A8I5ZZX8;P62944	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	APEVSQYIYQVYDSILKN	APEVSQYIYQVYDSILKN	3	APEVSQYIYQVYDSILKN3	3685.39	7388.8	5441.73
A0A0G2K828	A0A0G2K828	A0A0G2K828_RAT	ENSRNOG00000066380	Ig-like domain-containing protein	1	APEWLGFIR	APEWLGFIR	2	APEWLGFIR2	422494	374750	372082
F1LWD0	F1LWD0	F1LWD0_RAT	AABR07065782.1	Ig-like domain-containing protein	1	APEWLSFIR	APEWLSFIR	2	APEWLSFIR2	233672	212009	212932
F7F5P9	F7F5P9	F7F5P9_RAT	G3bp2	G3BP stress granule assembly factor 2	1	APEYLHR	APEYLHR	2	APEYLHR2	15210.2	17771.8	5832.72
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	APFAAHGYGAFLTLSILDR	APFAAHGYGAFLTLSILDR	3	APFAAHGYGAFLTLSILDR3	486531	318415	308765
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	APFAAHGYGAFLTLSILDRYYTPTISR	APFAAHGYGAFLTLSILDRYYTPTISR	4	APFAAHGYGAFLTLSILDRYYTPTISR4	62387.6	51183.6	53348.4
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	APFDLFENK	APFDLFENK	2	APFDLFENK2	352273	307638	346079
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	APFDLFENKK	APFDLFENKK	2	APFDLFENKK2	6508.06	4836.59	4139.25
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	APFDLFENKK	APFDLFENKK	3	APFDLFENKK3	76516.7	70570.5	76494.8
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	APFDLFENR	APFDLFENR	2	APFDLFENR2	166155	199906	159000
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	APFDLFENRK	APFDLFENRK	3	APFDLFENRK3	40211.2	38942.8	39697.8
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	APFEEIAAQCESK	APFEEIAAQC(UniMod:4)ESK	2	APFEEIAAQC(UniMod:4)ESK2	11219.5	19018.4	13553
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	APFEEIAAQCESK	APFEEIAAQC(UniMod:4)ESK	3	APFEEIAAQC(UniMod:4)ESK3			6011.88
Q8K581	Q8K581	TXND9_RAT	Txndc9	Thioredoxin domain-containing protein 9	1	APFLCER	APFLC(UniMod:4)ER	2	APFLC(UniMod:4)ER2	72374.8	86255.3	76927.5
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	APFLQMDDSR	APFLQMDDSR	2	APFLQMDDSR2	14658.6	17124.3	19043.2
Q8K3V3	Q8K3V3	AGRG1_RAT	Adgrg1	Adhesion G-protein coupled receptor G1	1	APFPAAPDIPYFFPEPR	APFPAAPDIPYFFPEPR	2	APFPAAPDIPYFFPEPR2	6981.15	8143.71	12410.8
Q8K3V3	Q8K3V3	AGRG1_RAT	Adgrg1	Adhesion G-protein coupled receptor G1	1	APFPAAPDIPYFFPEPR	APFPAAPDIPYFFPEPR	3	APFPAAPDIPYFFPEPR3	8082.16	5995.91	8810.97
Q9WTV0	Q9WTV0	PREB_RAT	Preb	Prolactin regulatory element-binding protein	1	APFPLYALR	APFPLYALR	2	APFPLYALR2	35498.6	31679.8	28932.7
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	APFSVEFVFESGSAR	APFSVEFVFESGSAR	2	APFSVEFVFESGSAR2	11805.1	13141	9233.98
D3ZYT9	D3ZYT9	D3ZYT9_RAT	Fbxl8	F-box and leucine-rich repeat protein 8	1	APFTLLALK	APFTLLALK	2	APFTLLALK2		5156.04	6619.25
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	APFTSATHLDHVRPMFK	APFTSATHLDHVRPMFK	4	APFTSATHLDHVRPMFK4	8322.58	13026.2	10332.2
P20761	P20761	IGG2B_RAT	Igh-1a	Ig gamma-2B chain C region	1	APFVCSVVHEGLHNHHVEK	APFVC(UniMod:4)SVVHEGLHNHHVEK	3	APFVC(UniMod:4)SVVHEGLHNHHVEK3	208227	110816	110305
P20761	P20761	IGG2B_RAT	Igh-1a	Ig gamma-2B chain C region	1	APFVCSVVHEGLHNHHVEK	APFVC(UniMod:4)SVVHEGLHNHHVEK	4	APFVC(UniMod:4)SVVHEGLHNHHVEK4	905096	733136	696965
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	APGEPTMEK	APGEPTMEK	2	APGEPTMEK2	29777.5	34184.2	27390
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	APGETALIDR	APGETALIDR	2	APGETALIDR2	49029.7	50196.3	44847.4
Q641Y2	Q641Y2	NDUS2_RAT	Ndufs2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	1	APGFAHLAGLDK	APGFAHLAGLDK	3	APGFAHLAGLDK3	15951.9	14209.6	8509.12
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	APGFAQMLK	APGFAQMLK	2	APGFAQMLK2	252644	254796	253454
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	APGFGDNR	APGFGDNR	2	APGFGDNR2	207707	175033	206678
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	APGFGDNRK	APGFGDNRK	2	APGFGDNRK2	92804.6	103759	
Q02589	Q02589	ADPRH_RAT	Adprh	ADP-ribosylhydrolase ARH1	1	APGGACMQNAMQLDPDR	APGGAC(UniMod:4)MQNAMQLDPDR	3	APGGAC(UniMod:4)MQNAMQLDPDR3	2100.01		1475.53
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	APGGFMSNR	APGGFMSNR	2	APGGFMSNR2	76742.5	68921.3	82654.5
P37136	P37136	ACES_RAT	Ache	Acetylcholinesterase	1	APGGPVSAFLGIPFAEPPVGSR	APGGPVSAFLGIPFAEPPVGSR	3	APGGPVSAFLGIPFAEPPVGSR3	25610.9	18630	16166.4
A0A8I6ANB2	A0A8I6ANB2	A0A8I6ANB2_RAT	Ppfibp1	PPFIA binding protein 1	1	APGHGASVDDSPFGTR	APGHGASVDDSPFGTR	3	APGHGASVDDSPFGTR3	8804.53	8683.83	5994.87
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	APGIDDIK	APGIDDIK	2	APGIDDIK2	46873.1	40825.7	39520.8
A0A8I5Y9U2	A0A8I5Y9U2	A0A8I5Y9U2_RAT	Cnot2	CCR4-NOT transcription complex, subunit 2	1	APGMEPTMK	APGMEPTMK	2	APGMEPTMK2	20107.9	21720.8	19944.4
F1LT49	F1LT49	F1LT49_RAT	Lrrc47	Leucine rich repeat containing 47	1	APGPGLAQGLPQLHSLVLR	APGPGLAQGLPQLHSLVLR	3	APGPGLAQGLPQLHSLVLR3	5086.12	8555.49	3891.57
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	APGQLECETAIAALNSCLR	APGQLEC(UniMod:4)ETAIAALNSC(UniMod:4)LR	3	APGQLEC(UniMod:4)ETAIAALNSC(UniMod:4)LR3	140343	123132	143959
Q5PQQ8	Q5PQQ8	ITGBL_RAT	Itgbl1	Integrin beta-like protein 1	1	APGQPPGSALCHDR	APGQPPGSALC(UniMod:4)HDR	3	APGQPPGSALC(UniMod:4)HDR3	63053.7	68000.1	55819.2
P12001	P12001	RL18_RAT	Rpl18	Large ribosomal subunit protein eL18	1	APGTPHSHTKPYVR	APGTPHSHTKPYVR	4	APGTPHSHTKPYVR4			14930.1
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	APHGLAGVVCYTQDADFPTSQSFQCVNGK	APHGLAGVVC(UniMod:4)YTQDADFPTSQSFQC(UniMod:4)VNGK	4	APHGLAGVVC(UniMod:4)YTQDADFPTSQSFQC(UniMod:4)VNGK4	13807.1	12476.6	11626.4
P08649	P08649	CO4_RAT	C4	Complement C4	1	APHIQLVAHSPWLK	APHIQLVAHSPWLK	2	APHIQLVAHSPWLK2	1.69178e+06	1.45994e+06	1.24564e+06
P08649	P08649	CO4_RAT	C4	Complement C4	1	APHIQLVAHSPWLK	APHIQLVAHSPWLK	3	APHIQLVAHSPWLK3	4.04162e+06	3.59964e+06	3.64134e+06
P08649	P08649	CO4_RAT	C4	Complement C4	1	APHIQLVAHSPWLK	APHIQLVAHSPWLK	4	APHIQLVAHSPWLK4	8.6271e+06	8.47236e+06	8.24199e+06
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	APHIQLVAYSPWLK	APHIQLVAYSPWLK	2	APHIQLVAYSPWLK2	1.50253e+06	1.58391e+06	1.0055e+06
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	APHIQLVAYSPWLK	APHIQLVAYSPWLK	3	APHIQLVAYSPWLK3	1.02424e+07	9.89543e+06	7.61899e+06
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	APHISQEFVER	APHISQEFVER	2	APHISQEFVER2	7224.69	7004.83	5781.25
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	APHISQEFVER	APHISQEFVER	3	APHISQEFVER3	13992.9	17007.3	19415
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	APHKDPPPKDPVIETIR	APHKDPPPKDPVIETIR	3	APHKDPPPKDPVIETIR3	50773.7	57948.2	40328.3
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	APHKDPPPKDPVIETIR	APHKDPPPKDPVIETIR	4	APHKDPPPKDPVIETIR4	76904.1	112665	112168
D4A7Z0	D4A7Z0	D4A7Z0_RAT	Wdtc1	WD and tetratricopeptide repeats 1	1	APHNAMLYGNR	APHNAMLYGNR	3	APHNAMLYGNR3	4613.71	6167.4	5798.51
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	APHNGFLSLAGDNTGPVTHFTQADVDAGR	APHNGFLSLAGDNTGPVTHFTQADVDAGR	4	APHNGFLSLAGDNTGPVTHFTQADVDAGR4	18938.3	21574.9	15304.7
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	APHTSAMFTR	APHTSAMFTR	2	APHTSAMFTR2	24395	28839	29233.5
P34980	P34980	PE2R3_RAT	Ptger3	Prostaglandin E2 receptor EP3 subtype	1	APHWYASHMK	APHWYASHMK	3	APHWYASHMK3		4489.95	4101.51
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	APIAAPEPELK	APIAAPEPELK	2	APIAAPEPELK2	29747.2	39243.3	18807.5
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	APIAFRPFK	APIAFRPFK	2	APIAFRPFK2	1115.6	6849.64	2751.75
Q62918	Q62918	NELL2_RAT	Nell2	Protein kinase C-binding protein NELL2	1	APIATAER	APIATAER	2	APIATAER2	9370.19	9198.84	12270.4
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	APIDWIEEYTTGMADR	APIDWIEEYTTGMADR	2	APIDWIEEYTTGMADR2	13467.5	19539.1	19724.8
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	APIDWIEEYTTGMADR	APIDWIEEYTTGMADR	3	APIDWIEEYTTGMADR3	15593.9	37016.2	32941.2
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	APIFTSEHGEK	APIFTSEHGEK	2	APIFTSEHGEK2	4369.56	3453.88	1778.43
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	APIFTSEHGEK	APIFTSEHGEK	3	APIFTSEHGEK3	17157.6	22768	5576.54
B2RZ33	B2RZ33	B2RZ33_RAT	Nck1	Cytoplasmic protein	1	APIFTSEQGEK	APIFTSEQGEK	2	APIFTSEQGEK2	6810.05	3025.04	
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	APIHLPEHVTVQVVVVR	APIHLPEHVTVQVVVVR	3	APIHLPEHVTVQVVVVR3	25877.2	11152	24935.5
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	APIHLPEHVTVQVVVVR	APIHLPEHVTVQVVVVR	4	APIHLPEHVTVQVVVVR4	153320	104976	103270
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	APIIAVTR	APIIAVTR	2	APIIAVTR2	378757	320656	289277
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	APIICVLGHVDTGK	APIIC(UniMod:4)VLGHVDTGK	3	APIIC(UniMod:4)VLGHVDTGK3	45950.7	33482.1	31570.4
M0RCS2	M0RCS2	M0RCS2_RAT	Tbl2	Transducin (beta)-like 2	1	APIINIGIADTGK	APIINIGIADTGK	2	APIINIGIADTGK2	10273.4	9054.43	14753.5
E9PT29	E9PT29;A0A8I5ZKV9	E9PT29_RAT	Ddx17	DEAD box helicase 17	0	APILIATDVASR	APILIATDVASR	2	APILIATDVASR2	6210.52	12831.2	4743.51
Q5BJY8	Q5BJY8	Q5BJY8_RAT	Manbal	Mannosidase beta like	1	APIPSTNK	APIPSTNK	2	APIPSTNK2	51287.4	43438.5	48817.7
Q99NA5	Q99NA5	IDH3A_RAT	Idh3a	Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial	1	APIQWEER	APIQWEER	2	APIQWEER2	230155	210585	220868
P50878	A0A8I6ASF5;P50878	RL4_RAT	Rpl4	Large ribosomal subunit protein uL4	0	APIRPDIVNFVHTNLR	APIRPDIVNFVHTNLR	3	APIRPDIVNFVHTNLR3	45060.5	13578.6	2357.59
P50878	A0A8I6ASF5;P50878	RL4_RAT	Rpl4	Large ribosomal subunit protein uL4	0	APIRPDIVNFVHTNLR	APIRPDIVNFVHTNLR	4	APIRPDIVNFVHTNLR4	146887	33200.6	15515.1
A0A0G2K089	A0A0G2K089	A0A0G2K089_RAT	Dennd4c	DENN domain containing 4C	1	APITDIAVIIK	APITDIAVIIK	2	APITDIAVIIK2	10280.5	8037.88	5090.63
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	APITELLEQNGGYGNSGPSR	APITELLEQNGGYGNSGPSR	3	APITELLEQNGGYGNSGPSR3	8967.64	12965.7	16966
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	APITGYIIR	APITGYIIR	2	APITGYIIR2	4.64484e+07	11038.2	4.92772e+07
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	APITHGSVK	APITHGSVK	2	APITHGSVK2			2990.16
Q3L7M0	Q3L7M0	GGTA1_RAT	Ggta1	N-acetyllactosaminide alpha-1,3-galactosyltransferase	1	APIVWEGTYDTALLEK	APIVWEGTYDTALLEK	2	APIVWEGTYDTALLEK2	18119.8	12400.6	13557.1
Q3L7M0	Q3L7M0	GGTA1_RAT	Ggta1	N-acetyllactosaminide alpha-1,3-galactosyltransferase	1	APIVWEGTYDTALLEK	APIVWEGTYDTALLEK	3	APIVWEGTYDTALLEK3	2328.3	2076.02	4476.59
Q5PQK2	A0A8I6A2Z4;Q5PQK2	Q5PQK2_RAT	Fus	FUS RNA binding protein	0	APKPDGPGGGPGGSHMGGNYGDDR	APKPDGPGGGPGGSHMGGNYGDDR	4	APKPDGPGGGPGGSHMGGNYGDDR4	10086.5		
D4A3I4	A0A0G2K4W2;D4A3I4	D4A3I4_RAT	Btf3l4	Transcription factor BTF3	0	APKPEDIDEEDDDVPDLVENFDEASK	APKPEDIDEEDDDVPDLVENFDEASK	3	APKPEDIDEEDDDVPDLVENFDEASK3	34919.6	23413	32552.9
F7EZE5	F7EZE5;A0A8I5Y9E6	F7EZE5_RAT	Btf3	Transcription factor BTF3	0	APLATGEDDDDEVPDLVENFDEASK	APLATGEDDDDEVPDLVENFDEASK	3	APLATGEDDDDEVPDLVENFDEASK3	18120.8	15167	15550.6
Q499P8	Q499P8	RUSF1_RAT	Rusf1	RUS family member 1	1	APLCTEQFGSGAPR	APLC(UniMod:4)TEQFGSGAPR	2	APLC(UniMod:4)TEQFGSGAPR2	4859.68	5149.93	3031.34
Q63798	Q63798	PSME2_RAT	Psme2	Proteasome activator complex subunit 2	1	APLDIPIPDPPPK	APLDIPIPDPPPK	2	APLDIPIPDPPPK2	152570	127212	135443
Q63798	Q63798	PSME2_RAT	Psme2	Proteasome activator complex subunit 2	1	APLDIPIPDPPPK	APLDIPIPDPPPK	3	APLDIPIPDPPPK3	6683.42	9457.32	11153.8
Q63798	Q63798	PSME2_RAT	Psme2	Proteasome activator complex subunit 2	1	APLDIPIPDPPPKDDEMETEQEK	APLDIPIPDPPPKDDEMETEQEK	3	APLDIPIPDPPPKDDEMETEQEK3	37376.4	34090.7	27833.5
Q63797	Q63797	PSME1_RAT	Psme1	Proteasome activator complex subunit 1	1	APLDIPVPDPVK	APLDIPVPDPVK	2	APLDIPVPDPVK2	73137.9	58965.3	59917.7
Q63797	Q63797	PSME1_RAT	Psme1	Proteasome activator complex subunit 1	1	APLDIPVPDPVKEK	APLDIPVPDPVKEK	3	APLDIPVPDPVKEK3	149205	132596	148943
Q64620	Q64620	PPP6_RAT	Ppp6c	Serine/threonine-protein phosphatase 6 catalytic subunit	1	APLDLDK	APLDLDK	2	APLDLDK2	331163	331041	329152
Q64620	Q64620	PPP6_RAT	Ppp6c	Serine/threonine-protein phosphatase 6 catalytic subunit	1	APLDLDKYVEIAR	APLDLDKYVEIAR	2	APLDLDKYVEIAR2	6589.11	18594.7	8351.25
Q64620	Q64620	PPP6_RAT	Ppp6c	Serine/threonine-protein phosphatase 6 catalytic subunit	1	APLDLDKYVEIAR	APLDLDKYVEIAR	3	APLDLDKYVEIAR3	13157.9	18885.3	17117.5
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	APLEVPQALGR	APLEVPQALGR	2	APLEVPQALGR2	157074	170128	163429
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	APLGEWEK	APLGEWEK	2	APLGEWEK2	24904.6	33153.6	22655.1
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	APLHLHENPDLAK	APLHLHENPDLAK	3	APLHLHENPDLAK3	9086.9		5874.35
P16975	P16975	SPRC_RAT	Sparc	SPARC	1	APLIPMEHCTTR	APLIPMEHC(UniMod:4)TTR	2	APLIPMEHC(UniMod:4)TTR2	100706	86503.9	77155.8
P16975	P16975	SPRC_RAT	Sparc	SPARC	1	APLIPMEHCTTR	APLIPMEHC(UniMod:4)TTR	3	APLIPMEHC(UniMod:4)TTR3	935294	941471	910241
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	APLKPYPVPTSDNILIQEQTQLK	APLKPYPVPTSDNILIQEQTQLK	3	APLKPYPVPTSDNILIQEQTQLK3	53698.2	45021.3	35671.8
D3ZAI6	D3ZAI6	D3ZAI6_RAT	Nt5dc3	5'-nucleotidase domain containing 3	1	APLLQEAQAK	APLLQEAQAK	2	APLLQEAQAK2		20738.4	12687.9
Q6AYI8	Q6AYI8	Q6AYI8_RAT	Edem2	alpha-1,2-Mannosidase	1	APLLSCPSQPFTSK	APLLSC(UniMod:4)PSQPFTSK	2	APLLSC(UniMod:4)PSQPFTSK2	4732.97	2784.7	6660.72
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	APLNIAVIGETGAGK	APLNIAVIGETGAGK	2	APLNIAVIGETGAGK2	5841.97	7502.05	3656.7
F1LVT9	A0A8I5ZSB0;F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	0	APLNIAVTGETGAGK	APLNIAVTGETGAGK	2	APLNIAVTGETGAGK2	15266	11721.6	9555.82
Q641X2	Q641X2	LEO1_RAT	Leo1	RNA polymerase-associated protein LEO1	1	APLQGDHNHLFIR	APLQGDHNHLFIR	3	APLQGDHNHLFIR3	9484.75		
Q9QUR2	Q9QUR2	DCTN4_RAT	Dctn4	Dynactin subunit 4	1	APLSQLYFCR	APLSQLYFC(UniMod:4)R	2	APLSQLYFC(UniMod:4)R2	53753.1	58791.4	67300.3
D3ZAR1	D3ZAR1	ARH_RAT	Ldlrap1	Low density lipoprotein receptor adapter protein 1	1	APLSTVSANTK	APLSTVSANTK	2	APLSTVSANTK2	54596.7	53605	57602.4
Q5U2Q3	Q5U2Q3	CK054_RAT		Ester hydrolase C11orf54 homolog	1	APLVCLPVFVSK	APLVC(UniMod:4)LPVFVSK	2	APLVC(UniMod:4)LPVFVSK2	8890.9	11242.3	5168.04
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	APMAAQGMVETR	APMAAQGMVETR	2	APMAAQGMVETR2	108133	97677.3	102220
A0A8I5ZQQ9	A0A8I5ZQQ9	A0A8I5ZQQ9_RAT	RGD1562178	Adenylate kinase 2, mitochondrial	1	APNALAPEPEHPK	APNALAPEPEHPK	2	APNALAPEPEHPK2	32728.5	20561.9	19278.4
A0A8I5ZQQ9	A0A8I5ZQQ9	A0A8I5ZQQ9_RAT	RGD1562178	Adenylate kinase 2, mitochondrial	1	APNALAPEPEHPK	APNALAPEPEHPK	3	APNALAPEPEHPK3	195613	203441	241114
A0A8I6A5H5	A0A8I6A5H5	A0A8I6A5H5_RAT	Rela	RELA proto-oncogene, NF-kB subunit	1	APNTAELK	APNTAELK	2	APNTAELK2	60556.7	59612.6	47502.8
Q3SWS8	Q3SWS8	RAE1L_RAT	Rae1	mRNA export factor	1	APNYSCVMTGSWDK	APNYSC(UniMod:4)VMTGSWDK	2	APNYSC(UniMod:4)VMTGSWDK2	4913.19	3688.28	3321.2
Q04400	Q04400	ADCY5_RAT	Adcy5	Adenylate cyclase type 5	1	APPAGGSGSSAAAAAAAGGTEVRPR	APPAGGSGSSAAAAAAAGGTEVRPR	3	APPAGGSGSSAAAAAAAGGTEVRPR3	37646.2	37561.8	
D3ZTA9	D3ZTA9	D3ZTA9_RAT	Hs3st3b1	Sulfotransferase	1	APPANSLVAGK	APPANSLVAGK	2	APPANSLVAGK2	9402.13		8488.43
A0A8I6A9R8	A0A8I6A9R8	A0A8I6A9R8_RAT	Cope	Coatomer subunit epsilon	1	APPAPGAVSGSSGEVDELFDVK	APPAPGAVSGSSGEVDELFDVK	3	APPAPGAVSGSSGEVDELFDVK3	5416.57	6647.48	6519.32
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	APPEEGPQSGLEEQR	APPEEGPQSGLEEQR	2	APPEEGPQSGLEEQR2	80932.5	72444.6	66072.1
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	APPEEGPQSGLEEQR	APPEEGPQSGLEEQR	3	APPEEGPQSGLEEQR3	21283.9	30073.6	30650.2
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	APPEGDSDLATR	APPEGDSDLATR	2	APPEGDSDLATR2	303760	320266	355774
G3V8Y8	G3V8Y8	G3V8Y8_RAT	Hip1	Huntingtin interacting protein 1	1	APPESADSLTEACR	APPESADSLTEAC(UniMod:4)R	2	APPESADSLTEAC(UniMod:4)R2		6390.34	
Q62871	Q62871	DC1I2_RAT	Dync1i2	Cytoplasmic dynein 1 intermediate chain 2	1	APPHELTEEEK	APPHELTEEEK	3	APPHELTEEEK3	73532.3	99426	56440.4
P80386	P80386	AAKB1_RAT	Prkab1	5'-AMP-activated protein kinase subunit beta-1	1	APPILPPHLLQVILNK	APPILPPHLLQVILNK	3	APPILPPHLLQVILNK3	12384.7	16122.3	
Q9Z254	Q9Z254	GIPC1_RAT	Gipc1	PDZ domain-containing protein GIPC1	1	APPLVENEEAEPSR	APPLVENEEAEPSR	2	APPLVENEEAEPSR2	1639.28	2625.51	4679.7
G3V8V4	G3V8V4	G3V8V4_RAT	Cers2	Ceramide synthase 2	1	APPNATLEHFYLTVGK	APPNATLEHFYLTVGK	2	APPNATLEHFYLTVGK2	4700.65	2844.86	
G3V8V4	G3V8V4	G3V8V4_RAT	Cers2	Ceramide synthase 2	1	APPNATLEHFYLTVGK	APPNATLEHFYLTVGK	3	APPNATLEHFYLTVGK3	125949	152477	96437.5
A0A8I5ZVI9	A0A8I5ZVI9	A0A8I5ZVI9_RAT	Ranbp3	RAN binding protein 3	1	APPPEPGATR	APPPEPGATR	2	APPPEPGATR2	43215.9	39074	24345.2
Q6AYB2	Q6AYB2	Q6AYB2_RAT	Sphk2	Sphingosine kinase 2	1	APPPLLPVAASTPILHGEFGSYPAHGPR	APPPLLPVAASTPILHGEFGSYPAHGPR	4	APPPLLPVAASTPILHGEFGSYPAHGPR4	7487.16	2877.65	12153.9
Q4QQV8	Q4QQV8	CHMP5_RAT	Chmp5	Charged multivesicular body protein 5	1	APPPSLTDCIGTVDSR	APPPSLTDC(UniMod:4)IGTVDSR	2	APPPSLTDC(UniMod:4)IGTVDSR2	150375	148025	122711
Q4QQV8	Q4QQV8	CHMP5_RAT	Chmp5	Charged multivesicular body protein 5	1	APPPSLTDCIGTVDSR	APPPSLTDC(UniMod:4)IGTVDSR	3	APPPSLTDC(UniMod:4)IGTVDSR3	20125.8	40290.9	32917
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	APPPVTSK	APPPVTSK	2	APPPVTSK2	35250.3	48328.9	45048
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	APPSCQLVSCGEPPMVK	APPSC(UniMod:4)QLVSC(UniMod:4)GEPPMVK	2	APPSC(UniMod:4)QLVSC(UniMod:4)GEPPMVK2	40462.6	41035.4	35962.5
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	APPSCQLVSCGEPPMVK	APPSC(UniMod:4)QLVSC(UniMod:4)GEPPMVK	3	APPSC(UniMod:4)QLVSC(UniMod:4)GEPPMVK3	44040.4	42273.1	36968.1
P13221	P13221	AATC_RAT	Got1	Aspartate aminotransferase, cytoplasmic	1	APPSFFAQVPQAPPVLVFK	APPSFFAQVPQAPPVLVFK	3	APPSFFAQVPQAPPVLVFK3	11573.2	16290.5	9061.37
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	APPSGPAPAGK	APPSGPAPAGK	2	APPSGPAPAGK2	73594.6	68802.6	43470.3
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	APPTLLSTSSGGK	APPTLLSTSSGGK	2	APPTLLSTSSGGK2	113327	103732	123076
B1H264	B1H264	B1H264_RAT	Tbc1d17	TBC1 domain family, member 17	1	APPVTEEEWNR	APPVTEEEWNR	2	APPVTEEEWNR2	33845.8	39110.3	38007.4
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	APPVTER	APPVTER	2	APPVTER2	91721.8	51088.7	4522.1
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	APPWGSQEPLR	APPWGSQEPLR	2	APPWGSQEPLR2	85214.2	90129.2	70034.2
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	APPWGSQEPLRQPQHLEGK	APPWGSQEPLRQPQHLEGK	4	APPWGSQEPLRQPQHLEGK4	10880.7	10945.6	9179.84
Q7M733	Q7M733	HPS6_RAT	Hps6	BLOC-2 complex member HPS6	1	APQALASILQGHLPPSALLTTLR	APQALASILQGHLPPSALLTTLR	3	APQALASILQGHLPPSALLTTLR3	2711.31		
G3V784	G3V784	G3V784_RAT	Adpgk	ADP-dependent glucokinase	1	APQEFMTSR	APQEFMTSR	2	APQEFMTSR2	63769.6	53894.3	72858.4
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	APQETYADIGGLDNQIQEIK	APQETYADIGGLDNQIQEIK	3	APQETYADIGGLDNQIQEIK3	73524.8	57468.9	65007.5
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	APQHTAVGFK	APQHTAVGFK	2	APQHTAVGFK2	9348.23	5062.54	
P04762	P04762	CATA_RAT	Cat	Catalase	1	APQKPDVLTTGGGNPIGDK	APQKPDVLTTGGGNPIGDK	3	APQKPDVLTTGGGNPIGDK3	19077.9	15045.6	17096.5
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	APQLEQEDVGK	APQLEQEDVGK	2	APQLEQEDVGK2	12986	8268.26	16744.6
Q9JID1	Q9JID1	PDCD4_RAT	Pdcd4	Programmed cell death protein 4	1	APQLVGQFIAR	APQLVGQFIAR	2	APQLVGQFIAR2	9649.56	19242.5	10548.7
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	APQMDWSK	APQMDWSK	2	APQMDWSK2	34748.5	16709	22716.2
D3ZK09	D3ZK09	D3ZK09_RAT	Scyl3	SCY1 like pseudokinase 3	1	APQMSQERPPQVR	APQMSQERPPQVR	3	APQMSQERPPQVR3	22434.3	19603	19361.1
P55146	P55146	TYRO3_RAT	Tyro3	Tyrosine-protein kinase receptor TYRO3	1	APQNFHAIR	APQNFHAIR	2	APQNFHAIR2	4555.83	3805.87	
Q5FWU3	Q5FWU3	ATG9A_RAT	Atg9a	Autophagy-related protein 9A	1	APQPIPR	APQPIPR	2	APQPIPR2	38558.9	42577	37870.3
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	APQPTGPPPAR	APQPTGPPPAR	2	APQPTGPPPAR2	21382.2	24639.6	39816.3
P08025	P08025	IGF1_RAT	Igf1	Insulin-like growth factor I	1	APQTGIVDECCFR	APQTGIVDEC(UniMod:4)C(UniMod:4)FR	2	APQTGIVDEC(UniMod:4)C(UniMod:4)FR2	20406.5	16238.1	15977.3
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	APQVDVDR	APQVDVDR	2	APQVDVDR2	37410.5	35728.4	32324.3
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	APQVPEAIEK	APQVPEAIEK	2	APQVPEAIEK2	30099.5	35285.1	30097
P02770	P02770	ALBU_RAT	Alb	Albumin	1	APQVSTPTLVEAAR	APQVSTPTLVEAAR	2	APQVSTPTLVEAAR2	34677.1	32333	40587.5
P02770	P02770	ALBU_RAT	Alb	Albumin	1	APQVSTPTLVEAAR	APQVSTPTLVEAAR	3	APQVSTPTLVEAAR3	6.00794e+06	6.13517e+06	6.29272e+06
A0A0G2QC19	A0A0G2QC19	A0A0G2QC19_RAT	Dnajc21	DnaJ heat shock protein family (Hsp40) member C21	1	APSAAASLDSVSSSR	APSAAASLDSVSSSR	2	APSAAASLDSVSSSR2	4496.06	3056.56	7919.83
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	APSAEVEMTAYVLLAYLTSASSR	APSAEVEMTAYVLLAYLTSASSR	3	APSAEVEMTAYVLLAYLTSASSR3		30358.7	12189.6
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	APSAEVEMTAYVLLAYLTSASSRPTR	APSAEVEMTAYVLLAYLTSASSRPTR	4	APSAEVEMTAYVLLAYLTSASSRPTR4		4752.27	6278.08
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	APSASPLVLHASR	APSASPLVLHASR	2	APSASPLVLHASR2	5084.38	5120.21	7699.56
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	APSASPLVLHASR	APSASPLVLHASR	3	APSASPLVLHASR3	38804.7	42770.8	44190.1
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	APSDLYQIILK	APSDLYQIILK	2	APSDLYQIILK2	257378	238117	253829
P40190	P40190	IL6RB_RAT	Il6st	Interleukin-6 receptor subunit beta	1	APSFWYK	APSFWYK	2	APSFWYK2	19092.1	17457.9	19496
Q2THW7	Q2THW7	ZDHC5_RAT	Zdhhc5	Palmitoyltransferase ZDHHC5	1	APSGVSETEEVALQPLLTPK	APSGVSETEEVALQPLLTPK	3	APSGVSETEEVALQPLLTPK3	7108.96	7854.5	9308.75
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	APSHSESALNNDSK	APSHSESALNNDSK	2	APSHSESALNNDSK2			3692.65
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	APSHSESALNNDSK	APSHSESALNNDSK	3	APSHSESALNNDSK3			17914.5
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	APSIASDVLPGAK	APSIASDVLPGAK	2	APSIASDVLPGAK2		8676.61	3019.98
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	APSIASDVLPGAKPSR	APSIASDVLPGAKPSR	3	APSIASDVLPGAKPSR3	3868.12	10571.3	7350.27
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	APSIAVHSMSSMSQDTEVR	APSIAVHSMSSMSQDTEVR	3	APSIAVHSMSSMSQDTEVR3	14636.2	11844.6	18146.7
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	APSIAVHSMSSMSQDTEVRK	APSIAVHSMSSMSQDTEVRK	4	APSIAVHSMSSMSQDTEVRK4	5580.4	11167.3	8546.21
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	APSIELNADHPFLFLIR	APSIELNADHPFLFLIR	2	APSIELNADHPFLFLIR2	3226.58	3849.29	4832.56
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	APSIELNADHPFLFLIR	APSIELNADHPFLFLIR	3	APSIELNADHPFLFLIR3	134263	82975.3	91501
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	APSIIFIDELDAIGTK	APSIIFIDELDAIGTK	2	APSIIFIDELDAIGTK2	14574.9	13975	16901.9
D3ZP12	D3ZP12	D3ZP12_RAT	Zc3h7a	Zinc finger CCCH type containing 7 A	1	APSLLGTLPIGAR	APSLLGTLPIGAR	2	APSLLGTLPIGAR2	7941.6	6200.06	8396.11
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	APSLTPDSEGK	APSLTPDSEGK	2	APSLTPDSEGK2	15302.4	10772.1	10419.5
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	APSMASSWQPWTPVPQAK	APSMASSWQPWTPVPQAK	3	APSMASSWQPWTPVPQAK3	25754.9	25269.1	19966.5
Q6PDU7	Q6PDU7	ATP5L_RAT	Atp5mg	ATP synthase subunit g, mitochondrial	1	APSMVAAAVTYSK	APSMVAAAVTYSK	2	APSMVAAAVTYSK2	29358.9	24767.2	24931
Q6PDU7	Q6PDU7	ATP5L_RAT	Atp5mg	ATP synthase subunit g, mitochondrial	1	APSMVAAAVTYSKPR	APSMVAAAVTYSKPR	2	APSMVAAAVTYSKPR2	6508.92	4534.89	4676.5
Q6PDU7	Q6PDU7	ATP5L_RAT	Atp5mg	ATP synthase subunit g, mitochondrial	1	APSMVAAAVTYSKPR	APSMVAAAVTYSKPR	3	APSMVAAAVTYSKPR3	127481	111487	126144
P58751	P58751	RELN_RAT	Reln	Reelin	1	APSNQNWLTVNGGK	APSNQNWLTVNGGK	2	APSNQNWLTVNGGK2	36575.8	39092	43267.3
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	APSNTFHPQDFSDVISFILYGNSHR	APSNTFHPQDFSDVISFILYGNSHR	4	APSNTFHPQDFSDVISFILYGNSHR4	3266.14	2270.6	
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	APSPSINR	APSPSINR	2	APSPSINR2	64539.3	74356.5	69822.4
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	APSSSLGCSEGCGPQGCPVCLAEETEAYEK	APSSSLGC(UniMod:4)SEGC(UniMod:4)GPQGC(UniMod:4)PVC(UniMod:4)LAEETEAYEK	4	APSSSLGC(UniMod:4)SEGC(UniMod:4)GPQGC(UniMod:4)PVC(UniMod:4)LAEETEAYEK4	3862.64	7136	2517.71
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	APSSSQPPPQPQAK	APSSSQPPPQPQAK	2	APSSSQPPPQPQAK2	108969	69014.3	95431
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	APSSSQPPPQPQAK	APSSSQPPPQPQAK	3	APSSSQPPPQPQAK3	38553.8	22586.5	41885.9
P13803	P13803	ETFA_RAT	Etfa	Electron transfer flavoprotein subunit alpha, mitochondrial	1	APSSSSAGISEWLDQK	APSSSSAGISEWLDQK	2	APSSSSAGISEWLDQK2	43504.6	38278.1	35471.7
P13803	P13803	ETFA_RAT	Etfa	Electron transfer flavoprotein subunit alpha, mitochondrial	1	APSSSSAGISEWLDQK	APSSSSAGISEWLDQK	3	APSSSSAGISEWLDQK3	8093.74	7423.4	7395.05
D3ZUV3	D3ZUV3	D3ZUV3_RAT	Eif2a	Eukaryotic translation initiation factor 2A	1	APSTPLLTVR	APSTPLLTVR	2	APSTPLLTVR2	8177.45	6170.88	8769.82
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	APSVANVGSHCDLSLK	APSVANVGSHC(UniMod:4)DLSLK	2	APSVANVGSHC(UniMod:4)DLSLK2	10654.3	6444.6	2800.26
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	APSVANVGSHCDLSLK	APSVANVGSHC(UniMod:4)DLSLK	3	APSVANVGSHC(UniMod:4)DLSLK3	597825	519002	519805
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	APSVATVGSICDLNLK	APSVATVGSIC(UniMod:4)DLNLK	2	APSVATVGSIC(UniMod:4)DLNLK2		4928.39	4477.01
P23928	P23928	CRYAB_RAT	Cryab	Alpha-crystallin B chain	1	APSWIDTGLSEMR	APSWIDTGLSEMR	2	APSWIDTGLSEMR2	1678.35		
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	APSYIEIFGR	APSYIEIFGR	2	APSYIEIFGR2	80959.7	8788.79	62563.1
Q3KR59	Q3KR59	UBP10_RAT	Usp10	Ubiquitin carboxyl-terminal hydrolase 10	1	APSYSISSTLNPQAPEFILGCPTSK	APSYSISSTLNPQAPEFILGC(UniMod:4)PTSK	3	APSYSISSTLNPQAPEFILGC(UniMod:4)PTSK3	7426.23		4622.18
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	APSYSYK	APSYSYK	2	APSYSYK2	24909.5	28985.4	23308.3
O88453	O88453;A0A8I6AJV7	SAFB1_RAT	Safb	Scaffold attachment factor B1	0	APTAAPSPEPR	APTAAPSPEPR	2	APTAAPSPEPR2	4771.89	6217.35	9009.71
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	APTAQVESFR	APTAQVESFR	2	APTAQVESFR2	1.36758e+06	1.63863e+06	1.43826e+06
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	APTASSFTTR	APTASSFTTR	2	APTASSFTTR2	18796.1	19571.7	15753.7
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	APTCSLDGALPLSAQIPALHR	APTC(UniMod:4)SLDGALPLSAQIPALHR	3	APTC(UniMod:4)SLDGALPLSAQIPALHR3	200335	170633	166991
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	APTCSLDGALPLSAQIPALHR	APTC(UniMod:4)SLDGALPLSAQIPALHR	4	APTC(UniMod:4)SLDGALPLSAQIPALHR4	3058.01	2661.43	9525.8
A0A8I5XVA3	A0A8I5XVA3	A0A8I5XVA3_RAT	Tnn	Tenascin N	1	APTDIDGPK	APTDIDGPK	2	APTDIDGPK2	8790.8	11982.7	9982.95
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	APTIEQMK	APTIEQMK	2	APTIEQMK2	335829	325002	323465
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	APTIILPLPGSGVDQLCVDILHSEK	APTIILPLPGSGVDQLC(UniMod:4)VDILHSEK	3	APTIILPLPGSGVDQLC(UniMod:4)VDILHSEK3	27737.3	42460.9	30618.2
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	APTIILPLPGSGVDQLCVDILHSEKPMK	APTIILPLPGSGVDQLC(UniMod:4)VDILHSEKPMK	4	APTIILPLPGSGVDQLC(UniMod:4)VDILHSEKPMK4	823649	868258	714208
A0A8I5ZNK2	A0A8I5ZNK2	A0A8I5ZNK2_RAT	Oxsr1	non-specific serine/threonine protein kinase	1	APTISER	APTISER	2	APTISER2	97771.5	79300.4	102407
Q641Y0	Q641Y0	OST48_RAT	Ddost	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit	1	APTIVGK	APTIVGK	1	APTIVGK1	8338.32	8300.87	5033.27
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	APTLASLENCMK	APTLASLENC(UniMod:4)MK	2	APTLASLENC(UniMod:4)MK2	14387	14437.1	15468.3
P21708	A0A8I6GKL7;P21708	MK03_RAT	Mapk3	Mitogen-activated protein kinase 3	0	APTLEAMR	APTLEAMR	2	APTLEAMR2	14079.4	14067.4	10249
Q5BK39	Q5BK39	CP054_RAT		Transmembrane protein C16orf54 homolog	1	APTLVWRPGGELWIEPTSSAR	APTLVWRPGGELWIEPTSSAR	3	APTLVWRPGGELWIEPTSSAR3	5312.04	11244.9	11945.3
Q63528	Q63528	RFA2_RAT	Rpa2	Replication protein A 32 kDa subunit	1	APTNIVYK	APTNIVYK	2	APTNIVYK2	19104.2	12352.1	22865
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	APTTCPVPPEQTK	APTTC(UniMod:4)PVPPEQTK	2	APTTC(UniMod:4)PVPPEQTK2	11831.3	13184.8	6789.93
Q62720	Q62720	ZNT1_RAT	Slc30a1	Proton-coupled zinc antiporter SLC30A1	1	APTVSISCLELSENLEK	APTVSISC(UniMod:4)LELSENLEK	2	APTVSISC(UniMod:4)LELSENLEK2	13701	10045.2	2524.66
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	APTVVTVPISK	APTVVTVPISK	2	APTVVTVPISK2	8236.27	8396.11	16277.2
D4A482	D4A482	D4A482_RAT	Mfsd2b	Major facilitator superfamily domain containing 2B	1	APVAEPHTQEPGSDKR	APVAEPHTQEPGSDKR	3	APVAEPHTQEPGSDKR3	27318.3	17745.3	26164.5
D4A482	D4A482	D4A482_RAT	Mfsd2b	Major facilitator superfamily domain containing 2B	1	APVAEPHTQEPGSDKR	APVAEPHTQEPGSDKR	4	APVAEPHTQEPGSDKR4	65075.3	42883.9	64467.2
Q9QZR6	Q9QZR6	SEPT9_RAT	Septin9	Septin-9	1	APVDFGYVGIDSILEQMR	APVDFGYVGIDSILEQMR	3	APVDFGYVGIDSILEQMR3	2131.8		1974.75
A0A8I5Y9V4	A0A8I5Y9V4	A0A8I5Y9V4_RAT	Cars1	cysteine--tRNA ligase	1	APVDITGQFEK	APVDITGQFEK	2	APVDITGQFEK2	2168.29		1576.84
D4A7F0	D4A7F0	D4A7F0_RAT	Ubr3	E3 ubiquitin-protein ligase	1	APVFEPGGSMQQGMYTPK	APVFEPGGSMQQGMYTPK	2	APVFEPGGSMQQGMYTPK2	5924.97	7369.72	8193.71
P0C5E3	P0C5E3	PALLD_RAT	Palld	Palladin (Fragment)	1	APVFIEK	APVFIEK	2	APVFIEK2	13486.5	11290.5	17186.7
Q4KLH5	Q4KLH5	AGFG1_RAT	Agfg1	Arf-GAP domain and FG repeat-containing protein 1	1	APVGSVVSVPSHSSASSDK	APVGSVVSVPSHSSASSDK	3	APVGSVVSVPSHSSASSDK3	5898.88	7132.21	8501.43
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	APVIDADKPVSSQLR	APVIDADKPVSSQLR	3	APVIDADKPVSSQLR3	125448	96471.9	127806
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	APVIVIPQSSLSTNAVVVDLGLIR	APVIVIPQSSLSTNAVVVDLGLIR	3	APVIVIPQSSLSTNAVVVDLGLIR3	2910.84	6204.96	2388.22
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	APVIWDNIHANDYDQK	APVIWDNIHANDYDQK	3	APVIWDNIHANDYDQK3	7149.03	16252.8	15495.7
A0A0G2JV35	A0A0G2JV35	A0A0G2JV35_RAT	Naa80	N(alpha)-acetyltransferase 80, NatH catalytic subunit	1	APVLAAQAIPR	APVLAAQAIPR	2	APVLAAQAIPR2	4828.02	8789.09	6130.49
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	APVLFFDR	APVLFFDR	2	APVLFFDR2	65610.2	51451.6	55503.1
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	APVLFFDRNPIGR	APVLFFDRNPIGR	3	APVLFFDRNPIGR3	33732.7	24394.4	40803.1
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	APVLFSK	APVLFSK	2	APVLFSK2	38540.4	24319.2	28323.8
F1M7Z1	F1M7Z1	F1M7Z1_RAT	Edc3	Enhancer of mRNA-decapping protein 3	1	APVLSIDPPVHEVEQGIDAK	APVLSIDPPVHEVEQGIDAK	3	APVLSIDPPVHEVEQGIDAK3	32306.6	31417.6	38004.9
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	APVPASTSVLGTASK	APVPASTSVLGTASK	2	APVPASTSVLGTASK2	107680	121520	101719
Q4FZT0	Q4FZT0	STML2_RAT	Stoml2	Stomatin-like protein 2, mitochondrial	1	APVPGAQNSSEAR	APVPGAQNSSEAR	2	APVPGAQNSSEAR2	54040.9	44269.1	30028.4
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	APVPSCLR	APVPSC(UniMod:4)LR	2	APVPSC(UniMod:4)LR2	246590	277867	270223
P35565	P35565	CALX_RAT	Canx	Calnexin	1	APVPTGEVYFADSFDR	APVPTGEVYFADSFDR	2	APVPTGEVYFADSFDR2	1.7498e+06	1.51908e+06	1.71252e+06
P35565	P35565	CALX_RAT	Canx	Calnexin	1	APVPTGEVYFADSFDR	APVPTGEVYFADSFDR	3	APVPTGEVYFADSFDR3	106976	106816	109267
Q08851	Q08851	STX5_RAT	Stx5	Syntaxin-5	1	APVSALPLAPNNLGGGPIVLGGESR	APVSALPLAPNNLGGGPIVLGGESR	3	APVSALPLAPNNLGGGPIVLGGESR3	14599.2	10014.3	11126.5
A0A8I6B124	A0A8I6B124	A0A8I6B124_RAT	Zswim8	Zinc finger, SWIM-type containing 8	1	APVSESLSR	APVSESLSR	2	APVSESLSR2	22638.2	20043.4	8873.07
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	APVSVACGGESPLDGICLSEADK	APVSVAC(UniMod:4)GGESPLDGIC(UniMod:4)LSEADK	3	APVSVAC(UniMod:4)GGESPLDGIC(UniMod:4)LSEADK3	60953.9	50802.4	55346.4
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	APVTLHLDGIVQVLNCHLSDTTIGMMTR	APVTLHLDGIVQVLNC(UniMod:4)HLSDTTIGMMTR	4	APVTLHLDGIVQVLNC(UniMod:4)HLSDTTIGMMTR4	5024.5		
A0A8I5Y153	A0A8I5Y153	A0A8I5Y153_RAT	Llgl2	LLGL scribble cell polarity complex component 2	1	APVVGILVLDGHNVPLPEPLEVAHDLSK	APVVGILVLDGHNVPLPEPLEVAHDLSK	4	APVVGILVLDGHNVPLPEPLEVAHDLSK4	7303.68		8172.21
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	APVVLIPQSPVSR	APVVLIPQSPVSR	2	APVVLIPQSPVSR2	122369	134098	137787
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	APVVLIPQSPVSR	APVVLIPQSPVSR	3	APVVLIPQSPVSR3	4063.25	2050.76	4730.05
E9PST5	E9PST5	E9PST5_RAT	Acin1	Apoptotic chromatin condensation inducer 1	1	APVVLQPEQIVSEEETPPPLLTK	APVVLQPEQIVSEEETPPPLLTK	3	APVVLQPEQIVSEEETPPPLLTK3	13618.6	9984.1	8763.51
M0RBL7	M0RBL7	M0RBL7_RAT	Tcaf2c	Protein FAM115C-like	1	APVVTYQCCMDR	APVVTYQC(UniMod:4)C(UniMod:4)MDR	2	APVVTYQC(UniMod:4)C(UniMod:4)MDR2	7838.52	3784.57	5880
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	APWELLELR	APWELLELR	2	APWELLELR2	3760.06	1990.97	1196.13
F1MAD3	F1MAD3	F1MAD3_RAT	Pkd1	Polycystin 1, transient receptor potential channel interacting	1	APWLQAQEQCR	APWLQAQEQC(UniMod:4)R	2	APWLQAQEQC(UniMod:4)R2		3562.05	2265.64
P20611	P20611	PPAL_RAT	Acp2	Lysosomal acid phosphatase	1	APWPLTLPGCPHR	APWPLTLPGC(UniMod:4)PHR	3	APWPLTLPGC(UniMod:4)PHR3	6608.83		
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	APYIAYLTR	APYIAYLTR	2	APYIAYLTR2	12047.4	6730.66	7300.93
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	APYSPTTSK	APYSPTTSK	2	APYSPTTSK2	14338.6	8664.14	10997.8
F1LSG7	F1LSG7	F1LSG7_RAT	Fgfr2	Fibroblast growth factor receptor	1	APYWTNTEK	APYWTNTEK	2	APYWTNTEK2	22283.5	12601.5	15957.8
F7ELS2	F7ELS2	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	1	AQAALAVNISAAR	AQAALAVNISAAR	2	AQAALAVNISAAR2	41218.9	44362.4	39481.2
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	AQAALDK	AQAALDK	1	AQAALDK1	1705.73		
B5DEY9	B5DEY9	B5DEY9_RAT	Csgalnact1	Hexosyltransferase	1	AQADILAFLR	AQADILAFLR	2	AQADILAFLR2	27232.1	25269.3	13838.6
Q6TMG5	Q6TMG5	NEMO_RAT	Ikbkg	NF-kappa-B essential modulator	1	AQADIYK	AQADIYK	2	AQADIYK2	20577.6	27790.6	27235.7
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	AQADLAYQLQVAK	AQADLAYQLQVAK	2	AQADLAYQLQVAK2	5753.83	1875.82	5424.69
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	AQAEEDLQEPK	AQAEEDLQEPK	2	AQAEEDLQEPK2	57926.2	64762	67913.1
Q9ET64	Q9ET64	NSMA_RAT	Smpd2	Sphingomyelin phosphodiesterase 2	1	AQAEIQHVLTR	AQAEIQHVLTR	2	AQAEIQHVLTR2	4472.94	6087.65	9076.66
Q9ET64	Q9ET64	NSMA_RAT	Smpd2	Sphingomyelin phosphodiesterase 2	1	AQAEIQHVLTR	AQAEIQHVLTR	3	AQAEIQHVLTR3	61014.1	69396.5	57364.8
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	AQAELSSFK	AQAELSSFK	2	AQAELSSFK2	38012.2	38215	37248.1
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	AQAEQQHNPAANPTMIR	AQAEQQHNPAANPTMIR	3	AQAEQQHNPAANPTMIR3	5830.53	5770.3	10374.7
P30427	P30427	PLEC_RAT	Plec	Plectin	1	AQAEVEGLGK	AQAEVEGLGK	2	AQAEVEGLGK2	11411	5245.5	8533.67
M0RBL7	M0RBL7	M0RBL7_RAT	Tcaf2c	Protein FAM115C-like	1	AQAHPQLKPEER	AQAHPQLKPEER	3	AQAHPQLKPEER3	6090.2		9404.25
D3ZYT8	D3ZYT8	D3ZYT8_RAT	Pikfyve	1-phosphatidylinositol-3-phosphate 5-kinase	1	AQAIAIGQAMVDGR	AQAIAIGQAMVDGR	2	AQAIAIGQAMVDGR2	6212.31	3169.43	7414.62
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	AQALAIETEAELER	AQALAIETEAELER	2	AQALAIETEAELER2	38397.4	33367.7	37713.8
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	AQALCSWTAK	AQALC(UniMod:4)SWTAK	2	AQALC(UniMod:4)SWTAK2	12541.5	10315.8	8213.67
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	AQALHLFDTLK	AQALHLFDTLK	3	AQALHLFDTLK3	10360.7	11925.6	4629.35
M0RBQ8	M0RBQ8	M0RBQ8_RAT	Dennd1c	DENN/MADD domain containing 1C	1	AQALLFGGYR	AQALLFGGYR	2	AQALLFGGYR2	1541.33	5656.48	
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	AQALPNGVPK	AQALPNGVPK	2	AQALPNGVPK2	164910	183891	145247
P34058	P34058;A0A8I5ZRY7	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	AQALRDNSTMGYMMAK	AQALRDNSTMGYMMAK	3	AQALRDNSTMGYMMAK3		5019.6	5475.73
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	AQALSDR	AQALSDR	1	AQALSDR1	208027		186897
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	AQALSDRIR	AQALSDRIR	2	AQALSDRIR2	18421.5	16398.3	13603.1
A0A1B0GWT7	A0A1B0GWT7;A0A8I6ADH7	A0A1B0GWT7_RAT	Lamtor2	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2	0	AQALVQYLEEPLTQVAAS	AQALVQYLEEPLTQVAAS	2	AQALVQYLEEPLTQVAAS2	10914.3	8118.41	7306.91
P19511	P19511	AT5F1_RAT	Atp5pb	ATP synthase F(0) complex subunit B1, mitochondrial	1	AQAQPIM	AQAQPIM	1	AQAQPIM1	69348.4	48676.9	64916.8
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	AQAQSILEVLR	AQAQSILEVLR	2	AQAQSILEVLR2	2161.31	10753.5	4003.22
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	AQASEVLLEELQQSFSQAK	AQASEVLLEELQQSFSQAK	3	AQASEVLLEELQQSFSQAK3	2522.35	9539.21	3384.28
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	AQASHAGGYSCVAENIAGR	AQASHAGGYSC(UniMod:4)VAENIAGR	2	AQASHAGGYSC(UniMod:4)VAENIAGR2	1836.56		3754.29
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	AQASHAGGYSCVAENIAGR	AQASHAGGYSC(UniMod:4)VAENIAGR	3	AQASHAGGYSC(UniMod:4)VAENIAGR3	15809.9	23347.8	17156.3
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	AQATDPDSGPNSYIEYTLLNPAGNK	AQATDPDSGPNSYIEYTLLNPAGNK	3	AQATDPDSGPNSYIEYTLLNPAGNK3		4682.62	3589.94
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	AQATPSQPLQSSQPK	AQATPSQPLQSSQPK	2	AQATPSQPLQSSQPK2	101338	100111	98635.3
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	AQATPSQPLQSSQPK	AQATPSQPLQSSQPK	3	AQATPSQPLQSSQPK3	3084.05	1715.48	3929.71
F1MAD3	F1MAD3	F1MAD3_RAT	Pkd1	Polycystin 1, transient receptor potential channel interacting	1	AQAVYEVSR	AQAVYEVSR	2	AQAVYEVSR2	2772.21	4289.6	4305.79
P09527	P09527	RAB7A_RAT	Rab7a	Ras-related protein Rab-7a	1	AQAWCYSK	AQAWC(UniMod:4)YSK	2	AQAWC(UniMod:4)YSK2	177079	191158	221017
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	AQAYQTGK	AQAYQTGK	1	AQAYQTGK1			22098.1
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	AQAYQTGK	AQAYQTGK	2	AQAYQTGK2			1.35616e+06
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	AQAYQTGKDISTNYYASQK	AQAYQTGKDISTNYYASQK	3	AQAYQTGKDISTNYYASQK3	3005.15	3132.51	
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	AQCCCEPGR	AQC(UniMod:4)C(UniMod:4)C(UniMod:4)EPGR	2	AQC(UniMod:4)C(UniMod:4)C(UniMod:4)EPGR2			3421.35
A0A096MKE0	A0A096MKE0	A0A096MKE0_RAT	Asph	Aspartate-beta-hydroxylase	1	AQCEDDLAEK	AQC(UniMod:4)EDDLAEK	2	AQC(UniMod:4)EDDLAEK2	14541.7	14393.4	34547.4
A0A0G2K098	A0A0G2K098	A0A0G2K098_RAT	Mcc	MCC regulator of WNT signaling pathway	1	AQCEQSHLMR	AQC(UniMod:4)EQSHLMR	3	AQC(UniMod:4)EQSHLMR3	8043.25	10985.2	14178
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	AQCETLSPDGLPEEQPQTTK	AQC(UniMod:4)ETLSPDGLPEEQPQTTK	3	AQC(UniMod:4)ETLSPDGLPEEQPQTTK3	31355.4	30234.1	28509.9
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	AQCGGGLLGVR	AQC(UniMod:4)GGGLLGVR	2	AQC(UniMod:4)GGGLLGVR2	14290.6	11439.4	22900
P24050	P24050	RS5_RAT	Rps5	Small ribosomal subunit protein uS7	1	AQCPIVER	AQC(UniMod:4)PIVER	2	AQC(UniMod:4)PIVER2	56416.5	42930.6	39286.1
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	AQDALPFFMMHLGYEK	AQDALPFFMMHLGYEK	2	AQDALPFFMMHLGYEK2	17569.6	15194.8	13518.4
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	AQDALPFFMMHLGYEK	AQDALPFFMMHLGYEK	3	AQDALPFFMMHLGYEK3	15417.1	14491.1	22476.3
F1LXS3	F1LXS3	F1LXS3_RAT	Matn2	Matrilin 2	1	AQDDVSEWAR	AQDDVSEWAR	2	AQDDVSEWAR2	5956.15	6472.89	5601.44
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	AQDECLPAMR	AQDEC(UniMod:4)LPAMR	2	AQDEC(UniMod:4)LPAMR2	2.39287e+06	2.08833e+06	2.46026e+06
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	AQDEGHLSDIVPFK	AQDEGHLSDIVPFK	2	AQDEGHLSDIVPFK2	5612.46	3219.83	
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	AQDEGHLSDIVPFK	AQDEGHLSDIVPFK	3	AQDEGHLSDIVPFK3	42967.1	31975	24120.1
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	AQDEGHLSDIVPFKVPGK	AQDEGHLSDIVPFKVPGK	3	AQDEGHLSDIVPFKVPGK3	4331.29	6400.76	8374.21
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	AQDEGHLSDIVPFKVPGK	AQDEGHLSDIVPFKVPGK	4	AQDEGHLSDIVPFKVPGK4	39518.4	42561.7	53182.6
Q8CHM7	Q8CHM7	HACL1_RAT	Hacl1	2-hydroxyacyl-CoA lyase 1	1	AQDFHWLTR	AQDFHWLTR	3	AQDFHWLTR3	7478.58	9401.93	7193.73
D3ZJF8	D3ZJF8;F7EZQ4	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	0	AQDFSPCPN	AQDFSPC(UniMod:4)PN	2	AQDFSPC(UniMod:4)PN2	218879	221854	224239
P11505	P11505	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	1	AQDGAAMEMQPLK	AQDGAAMEMQPLK	2	AQDGAAMEMQPLK2	23465.1	22438.4	19394.3
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	AQDGEFIFSK	AQDGEFIFSK	2	AQDGEFIFSK2	18787.7	9114.4	15482.9
O88277	O88277	FAT2_RAT	Fat2	Protocadherin Fat 2	1	AQDGGPPHWDSLVPVR	AQDGGPPHWDSLVPVR	3	AQDGGPPHWDSLVPVR3	7846.02	4639.45	13001.5
P19686	Q9WVI4;P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	0	AQDGLKK	AQDGLKK	1	AQDGLKK1			4056.07
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	AQDGSNPLSLQDLIEK	AQDGSNPLSLQDLIEK	2	AQDGSNPLSLQDLIEK2	19725.7	20037.8	9774.74
D4AD36	D4AD36	D4AD36_RAT	Fchsd1	FCH and double SH3 domains 1	1	AQDGVDDGFWR	AQDGVDDGFWR	2	AQDGVDDGFWR2	4772.09		4144.35
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	AQDIEAGDGTTSVVIIAGSLLDSCTK	AQDIEAGDGTTSVVIIAGSLLDSC(UniMod:4)TK	3	AQDIEAGDGTTSVVIIAGSLLDSC(UniMod:4)TK3	11700.9	9746.71	16690.4
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	AQDIEHHAGQVDCALSLVR	AQDIEHHAGQVDC(UniMod:4)ALSLVR	3	AQDIEHHAGQVDC(UniMod:4)ALSLVR3	4406.04	5392.38	7070.56
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	AQDIEHHAGQVDCALSLVR	AQDIEHHAGQVDC(UniMod:4)ALSLVR	4	AQDIEHHAGQVDC(UniMod:4)ALSLVR4	10851.7	20185.8	18633.2
Q5M823	Q5M823	NUDC2_RAT	Nudcd2	NudC domain-containing protein 2	1	AQDIQCGLQSR	AQDIQC(UniMod:4)GLQSR	2	AQDIQC(UniMod:4)GLQSR2	7688.51	6331.38	10446.3
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	AQDLPLK	AQDLPLK	2	AQDLPLK2	224402	212807	240642
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	AQDLPLKK	AQDLPLKK	2	AQDLPLKK2	89212.5	79208.9	94994.6
P08649	P08649	CO4_RAT	C4	Complement C4	1	AQDMLQEEDLIDEDDILVR	AQDMLQEEDLIDEDDILVR	3	AQDMLQEEDLIDEDDILVR3	8.23035e+06	1.11411e+07	1.12e+07
P08649	P08649	CO4_RAT	C4	Complement C4	1	AQDMLQEEDLIDEDDILVR	AQDMLQEEDLIDEDDILVR	4	AQDMLQEEDLIDEDDILVR4	9476.9	6845.38	6635.6
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	AQDPDQLR	AQDPDQLR	2	AQDPDQLR2	29839.6	26544.9	30437.6
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	AQDSYQTPQNPSIVPR	AQDSYQTPQNPSIVPR	2	AQDSYQTPQNPSIVPR2	1919.42	6994.56	3446.43
P15650	P15650	ACADL_RAT	Acadl	Long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	AQDTAELFFEDVR	AQDTAELFFEDVR	2	AQDTAELFFEDVR2	95211	88614.3	73607.4
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	AQDTFQTIEGIIR	AQDTFQTIEGIIR	2	AQDTFQTIEGIIR2	1614.32	2611.33	2876.17
Q9WV63	Q9WV63;A0A8I6A456	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	0	AQDVDATNPNYEIMCMIR	AQDVDATNPNYEIMC(UniMod:4)MIR	3	AQDVDATNPNYEIMC(UniMod:4)MIR3	20778.2	28729.2	32447.2
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	AQDVLPVQAQWQEVK	AQDVLPVQAQWQEVK	2	AQDVLPVQAQWQEVK2	7516.02	5986.87	9508.87
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AQEACGPLEMDSALSVVQNLEK	AQEAC(UniMod:4)GPLEMDSALSVVQNLEK	3	AQEAC(UniMod:4)GPLEMDSALSVVQNLEK3	349260	394066	344701
A0A0G2K1A4	A0A0G2K1A4	A0A0G2K1A4_RAT	Evi5l	Ecotropic viral integration site 5-like	1	AQEAEENYVIK	AQEAEENYVIK	2	AQEAEENYVIK2	3460.4	5427.72	9516.88
Q0H8B9	Q0H8B9;A4KWA5	CL2DB_RAT	Clec2d11	C-type lectin domain family 2 member D11	0	AQEAELAR	AQEAELAR	2	AQEAELAR2	55248.2	49658.5	79262.9
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	AQEAEVGEPR	AQEAEVGEPR	2	AQEAEVGEPR2	49213	55481.9	48885.4
O54857	O54857	PTEN_RAT	Pten	Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN	1	AQEALDFYGEVR	AQEALDFYGEVR	2	AQEALDFYGEVR2	18053.1	21074.3	16270.2
Q4QQU5	Q4QQU5	YIPF6_RAT	Yipf6	Protein YIPF6	1	AQECDSSTLNESIR	AQEC(UniMod:4)DSSTLNESIR	2	AQEC(UniMod:4)DSSTLNESIR2	12114.4	13169	7713.5
Q4QQU5	Q4QQU5	YIPF6_RAT	Yipf6	Protein YIPF6	1	AQECDSSTLNESIRR	AQEC(UniMod:4)DSSTLNESIRR	3	AQEC(UniMod:4)DSSTLNESIRR3	5478.79	26070.1	23077.9
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	AQEDASDETPK	AQEDASDETPK	2	AQEDASDETPK2			49180.3
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	AQEDTVAAMMNIK	AQEDTVAAMMNIK	2	AQEDTVAAMMNIK2	30698.3	30619.8	21295.2
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	AQEDTVAAMMNIK	AQEDTVAAMMNIK	3	AQEDTVAAMMNIK3	2795.15	2652.99	4362.24
Q9EPJ3	Q9EPJ3	RT26_RAT	Mrps26	Small ribosomal subunit protein mS26	1	AQEEQAWVQLK	AQEEQAWVQLK	2	AQEEQAWVQLK2		6667.72	3798.35
Q9JKE3	Q9JKE3	SCAM5_RAT	Scamp5	Secretory carrier-associated membrane protein 5	1	AQEEWTTGAWK	AQEEWTTGAWK	2	AQEEWTTGAWK2	694674	408948	434013
B2RYI0	B2RYI0	WDR91_RAT	Wdr91	WD repeat-containing protein 91	1	AQEFFAK	AQEFFAK	2	AQEFFAK2	13478.9	13067.7	7884.33
D4A2N2	D4A2N2	D4A2N2_RAT	Inpp5b	phosphoinositide 5-phosphatase	1	AQEFIHHFLCNPL	AQEFIHHFLC(UniMod:4)NPL	3	AQEFIHHFLC(UniMod:4)NPL3	11718.5	6841.85	
Q5FWT1	Q5FWT1	FA98A_RAT	Fam98a	Protein FAM98A	1	AQEGGGSEVFQELK	AQEGGGSEVFQELK	2	AQEGGGSEVFQELK2	3276.23		4047.03
Q63159	Q63159	COQ3_RAT	Coq3	Ubiquinone biosynthesis O-methyltransferase, mitochondrial	1	AQEHLEPAESA	AQEHLEPAESA	2	AQEHLEPAESA2	12084.2	13479.3	8147.92
Q5XIT9	Q5XIT9	MCCB_RAT	Mccc2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	1	AQEIALQNR	AQEIALQNR	2	AQEIALQNR2	39921.6	38921.9	37150.9
Q6DGG0	M0RB67;Q6DGG0	PPID_RAT	Ppid	Peptidyl-prolyl cis-trans isomerase D	0	AQEIAPGDK	AQEIAPGDK	2	AQEIAPGDK2	10423.4	7175.23	10482.3
P12007	P12007	IVD_RAT	Ivd	Isovaleryl-CoA dehydrogenase, mitochondrial	1	AQEIDQSNDFK	AQEIDQSNDFK	2	AQEIDQSNDFK2	21885.3	13158.7	16450.3
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	AQEIEAATLAGR	AQEIEAATLAGR	2	AQEIEAATLAGR2	134937	94596.5	120773
A0A8I6AL00	A0A8I6AL00	A0A8I6AL00_RAT	Ndufs8	NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial	1	AQELDVDMK	AQELDVDMK	2	AQELDVDMK2	75313.9	69964.8	80978.2
Q5M876	Q5M876	ACY3_RAT	Acy3	N-acyl-aromatic-L-amino acid amidohydrolase (carboxylate-forming)	1	AQELNQLLGPK	AQELNQLLGPK	2	AQELNQLLGPK2	3426.58	3138.62	6356.48
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	AQENQQIGR	AQENQQIGR	2	AQENQQIGR2	20696		15798.3
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	AQENYEGSEEVSPPQTK	AQENYEGSEEVSPPQTK	2	AQENYEGSEEVSPPQTK2	48026.4	55861.5	50338.5
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	AQENYEGSEEVSPPQTK	AQENYEGSEEVSPPQTK	3	AQENYEGSEEVSPPQTK3	18607	28902.4	24563.1
F1MAR6	F1MAR6	F1MAR6_RAT	Prodh	Proline dehydrogenase	1	AQEQPPANPEALR	AQEQPPANPEALR	2	AQEQPPANPEALR2	19944	19979.9	16018.3
A0A8I6GDA1	A0A8I6GDA1	A0A8I6GDA1_RAT	Arhgap21	Rho GTPase activating protein 21	1	AQEQSADKESELSAVNR	AQEQSADKESELSAVNR	3	AQEQSADKESELSAVNR3	2535.21		1781.75
D3ZPA1	D3ZPA1	D3ZPA1_RAT	Gcc1	GRIP and coiled-coil domain containing 1	1	AQEQSDHALMLR	AQEQSDHALMLR	3	AQEQSDHALMLR3	10047	8201.05	20026.9
A0A8I6A502	A0A8I6A502	A0A8I6A502_RAT	Tns3	Tensin 3	1	AQESWLNSDPQHVVVIHCR	AQESWLNSDPQHVVVIHC(UniMod:4)R	4	AQESWLNSDPQHVVVIHC(UniMod:4)R4	17541.9	14517.7	6092.36
D3ZQI6	D3ZQI6	D3ZQI6_RAT	Xpo4	Exportin 4	1	AQETESPLFLATR	AQETESPLFLATR	2	AQETESPLFLATR2	13396.3	16812.3	10957
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	AQETQDESAVLWLDEIQGGIWQSNK	AQETQDESAVLWLDEIQGGIWQSNK	3	AQETQDESAVLWLDEIQGGIWQSNK3	6317.39	6496.08	7868.81
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	AQEVEAELLQSHQEETQQLHR	AQEVEAELLQSHQEETQQLHR	3	AQEVEAELLQSHQEETQQLHR3		3836.99	2329.1
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	AQEVEAELLQSHQEETQQLHR	AQEVEAELLQSHQEETQQLHR	4	AQEVEAELLQSHQEETQQLHR4	12076.7	7401.92	10138.6
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	AQEVENVK	AQEVENVK	2	AQEVENVK2	103969	111172	105764
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	AQEVEVLLSEK	AQEVEVLLSEK	2	AQEVEVLLSEK2	6558.81	3525.88	
A0A8I6A3B1	A0A8I6A3B1	A0A8I6A3B1_RAT	Ncoa4	Nuclear receptor coactivator 4	1	AQEVFLNSPLQEER	AQEVFLNSPLQEER	2	AQEVFLNSPLQEER2	3765.29	2398.85	2440.34
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	AQEVTALLK	AQEVTALLK	2	AQEVTALLK2	103833	112764	113777
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	AQFAESTQR	AQFAESTQR	2	AQFAESTQR2	66855.8	78827.2	144744
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	AQFEGIVTDLIK	AQFEGIVTDLIK	2	AQFEGIVTDLIK2	109736	133166	173207
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	AQFEGIVTDLIK	AQFEGIVTDLIK	3	AQFEGIVTDLIK3	3129.11	2591.69	1226.23
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	AQFEGIVTDLIKR	AQFEGIVTDLIKR	3	AQFEGIVTDLIKR3	5304.06	13045.9	11857.2
Q62844	Q62844	FYN_RAT	Fyn	Tyrosine-protein kinase Fyn	1	AQFETLQQLVQHYSER	AQFETLQQLVQHYSER	3	AQFETLQQLVQHYSER3			11181.5
B0BN83	B0BN83	B0BN83_RAT	Armc1	Armadillo repeat-containing protein 1	1	AQFFLGTTNK	AQFFLGTTNK	2	AQFFLGTTNK2	41300.6	35971.7	25550.5
P14604	P14604	ECHM_RAT	Echs1	Enoyl-CoA hydratase, mitochondrial	1	AQFGQPEILLGTIPGAGGTQR	AQFGQPEILLGTIPGAGGTQR	3	AQFGQPEILLGTIPGAGGTQR3	47174.1	42449.3	40320.1
P37136	P37136	ACES_RAT	Ache	Acetylcholinesterase	1	AQFLAGVR	AQFLAGVR	2	AQFLAGVR2	192463	172361	182712
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	AQFLEGFR	AQFLEGFR	2	AQFLEGFR2	27531.9	29562.2	12566.4
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	AQFLQLSQYR	AQFLQLSQYR	2	AQFLQLSQYR2	29755.8	39714.6	35158.9
Q5XIH7	Q5XIH7	PHB2_RAT	Phb2	Prohibitin-2	1	AQFLVEK	AQFLVEK	2	AQFLVEK2	307591	351857	377881
D4A0G9	D4A0G9	D4A0G9_RAT	Ercc6l	ERCC excision repair 6 like, spindle assembly checkpoint helicase	1	AQFLVESESQNTK	AQFLVESESQNTK	2	AQFLVESESQNTK2	7395.12	8139.78	9866.45
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	AQFQDALEDVR	AQFQDALEDVR	2	AQFQDALEDVR2	38190.9	45922.4	29622.8
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	AQFQDALEDVRDR	AQFQDALEDVRDR	2	AQFQDALEDVRDR2	5190.44	5613.14	13010.9
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	AQFQDALEDVRDR	AQFQDALEDVRDR	3	AQFQDALEDVRDR3	522442	698790	635205
B2GUX8	B2GUX8	B2GUX8_RAT	Sh3bp5l	SH3 domain-binding protein 5	1	AQFSQILEEHK	AQFSQILEEHK	3	AQFSQILEEHK3	16740.5	17262.1	19861
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	AQFVSCGQDK	AQFVSC(UniMod:4)GQDK	2	AQFVSC(UniMod:4)GQDK2	95509	102695	114386
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	AQGAAQGAIR	AQGAAQGAIR	2	AQGAAQGAIR2	17266.2	22036.4	
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	AQGAIAMASIAK	AQGAIAMASIAK	2	AQGAIAMASIAK2	4669.3	4050.52	5395.14
Q68FT7	Q68FT7	Q68FT7_RAT	Farsb	Phenylalanine--tRNA ligase beta subunit	1	AQGASDVVLYK	AQGASDVVLYK	2	AQGASDVVLYK2	12311.2	17346.4	14736.2
D3ZJF8	D3ZJF8;F7EZQ4	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	0	AQGDPHYTTFDGR	AQGDPHYTTFDGR	2	AQGDPHYTTFDGR2	23649.7	16597.1	11475.2
D3ZJF8	D3ZJF8;F7EZQ4	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	0	AQGDPHYTTFDGR	AQGDPHYTTFDGR	3	AQGDPHYTTFDGR3	74606.1	81523.8	79692
D3ZJF8	D3ZJF8;F7EZQ4	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	0	AQGDPHYTTFDGRR	AQGDPHYTTFDGRR	3	AQGDPHYTTFDGRR3	30428.5	29551.9	30867.1
D3ZJF8	D3ZJF8;F7EZQ4	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	0	AQGDPHYTTFDGRR	AQGDPHYTTFDGRR	4	AQGDPHYTTFDGRR4	42343.2	49559.7	48342.6
B5DFN2	D3ZWL6;B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	0	AQGEKPLAGAK	AQGEKPLAGAK	2	AQGEKPLAGAK2			7987.67
D3ZCD0	D3ZCD0	D3ZCD0_RAT	Tek	receptor protein-tyrosine kinase	1	AQGEWSEELR	AQGEWSEELR	2	AQGEWSEELR2	6736.13	2330.02	5521.35
Q4KLG9	Q4KLG9	ZFN2B_RAT	Zfand2b	AN1-type zinc finger protein 2B	1	AQGLASTSTVPSPSR	AQGLASTSTVPSPSR	2	AQGLASTSTVPSPSR2	4963.32	2839.19	3007.03
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	AQGLPVTCEVAPHHLFLNR	AQGLPVTC(UniMod:4)EVAPHHLFLNR	3	AQGLPVTC(UniMod:4)EVAPHHLFLNR3	7118.33	9206.36	6355.28
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	AQGLPVTCEVAPHHLFLNR	AQGLPVTC(UniMod:4)EVAPHHLFLNR	4	AQGLPVTC(UniMod:4)EVAPHHLFLNR4	23714.8	9451.55	5030.79
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	AQGMPEGGGALAEGFQVR	AQGMPEGGGALAEGFQVR	2	AQGMPEGGGALAEGFQVR2	25586.2	40354.3	20626.5
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	AQGPPKPNTDEGGAVLPSCADLFVYYK	AQGPPKPNTDEGGAVLPSC(UniMod:4)ADLFVYYK	3	AQGPPKPNTDEGGAVLPSC(UniMod:4)ADLFVYYK3	5071.3	3218.17	
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	AQGPSQVHSLPDK	AQGPSQVHSLPDK	3	AQGPSQVHSLPDK3	65800.6	68240.5	64455.2
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	AQGPSQVHSLPDKK	AQGPSQVHSLPDKK	3	AQGPSQVHSLPDKK3	18172.5	29411.2	39305.9
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	AQGSHPELSSPASILIMLTDGEPTEGETDR	AQGSHPELSSPASILIMLTDGEPTEGETDR	4	AQGSHPELSSPASILIMLTDGEPTEGETDR4	3.96382e+06	80459.7	72238
A0A0G2K975	A0A0G2K975	A0A0G2K975_RAT	Cfhr4	Similar to complement factor H-related protein	1	AQGSPEFR	AQGSPEFR	2	AQGSPEFR2	25135.4	25675	16462.9
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	AQGTQCPGAESEDWAMLSR	AQGTQC(UniMod:4)PGAESEDWAMLSR	3	AQGTQC(UniMod:4)PGAESEDWAMLSR3	21815.2	20948.5	14983.1
Q6MG56	Q6MG56	LY66F_RAT	Ly6g6f	Lymphocyte antigen 6 complex locus protein G6f	1	AQGTQDREPSIPHFKPEVQVYENIHLAR	AQGTQDREPSIPHFKPEVQVYENIHLAR	4	AQGTQDREPSIPHFKPEVQVYENIHLAR4	6979.82	2429.43	3763.63
A0A0G2JTX7	A0A0G2JTX7	A0A0G2JTX7_RAT	Col6a5	Collagen type VI alpha 5 chain	1	AQGVPQIAVLVTHR	AQGVPQIAVLVTHR	3	AQGVPQIAVLVTHR3	13081.2	3906.16	16911.9
D4A1R8	D4A1R8	CPNE1_RAT	Cpne1	Copine-1	1	AQGWAPLK	AQGWAPLK	2	AQGWAPLK2	28127.3	26141.5	33755.1
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	AQGYSGLSVK	AQGYSGLSVK	2	AQGYSGLSVK2	181350	222541	216977
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	AQHAGAIIR	AQHAGAIIR	2	AQHAGAIIR2	77816.6	75846.3	80759.8
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	AQHEDQVEQYK	AQHEDQVEQYK	3	AQHEDQVEQYK3	41195.2	41401.1	19714.1
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	AQHEQYVAEAEEK	AQHEQYVAEAEEK	2	AQHEQYVAEAEEK2	5126.67	7397.21	13766.1
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	AQHEQYVAEAEEK	AQHEQYVAEAEEK	3	AQHEQYVAEAEEK3	207472	211774	212445
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	AQHIRPEEHEQLR	AQHIRPEEHEQLR	3	AQHIRPEEHEQLR3	17899.1	9602.09	15028.3
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	AQHNLLTEQIHSLSIEAK	AQHNLLTEQIHSLSIEAK	3	AQHNLLTEQIHSLSIEAK3	3986.06	4786.62	6414.25
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	AQHNLLTEQIHSLSIEAK	AQHNLLTEQIHSLSIEAK	4	AQHNLLTEQIHSLSIEAK4	36048.6	26624.6	40273.9
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	AQHQDPDVGGLHK	AQHQDPDVGGLHK	2	AQHQDPDVGGLHK2	22234.9	25182	9162.06
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	AQHQDPDVGGLHK	AQHQDPDVGGLHK	3	AQHQDPDVGGLHK3	139824	118251	110140
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	AQHSDAGLYTCQASNSAGITK	AQHSDAGLYTC(UniMod:4)QASNSAGITK	3	AQHSDAGLYTC(UniMod:4)QASNSAGITK3	6898.22	6772.39	9415.57
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	AQHVQVEEGSEPDGFWEALGGK	AQHVQVEEGSEPDGFWEALGGK	3	AQHVQVEEGSEPDGFWEALGGK3	3.37325e+06	3.08692e+06	3.06305e+06
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	AQHYLELGAEIAR	AQHYLELGAEIAR	2	AQHYLELGAEIAR2		2980.4	
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	AQHYLELGAEIAR	AQHYLELGAEIAR	3	AQHYLELGAEIAR3	54445	51043.1	55537.6
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	AQIEEVLQR	AQIEEVLQR	2	AQIEEVLQR2	338712	361247	338295
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	AQIGTVLPSLIDR	AQIGTVLPSLIDR	2	AQIGTVLPSLIDR2	198925	248063	209660
P0DMW0;P0DMW1	P0DMW0;P0DMW1	HS71A_RAT;HS71B_RAT	Hspa1a;Hspa1b	Heat shock 70 kDa protein 1A	0	AQIHDLVLVGGSTR	AQIHDLVLVGGSTR	3	AQIHDLVLVGGSTR3	16992		3368.51
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	AQIHNGILR	AQIHNGILR	2	AQIHNGILR2	5546.98	9350.04	6154.18
P15684	P15684	AMPN_RAT	Anpep	Aminopeptidase N	1	AQIIHDSFNLASAGK	AQIIHDSFNLASAGK	3	AQIIHDSFNLASAGK3	13474.5	7406.68	12213.2
Q9R1R4	Q9R1R4	TDRD7_RAT	Tdrd7	Tudor domain-containing protein 7	1	AQIISTDENK	AQIISTDENK	2	AQIISTDENK2	5801.11	4775.8	3965.78
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	AQIITEK	AQIITEK	2	AQIITEK2	64530.9	70375.5	85951.7
A0A8I6AIH6	A0A8I6AIH6	A0A8I6AIH6_RAT	Suclg2	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial	1	AQILAGGR	AQILAGGR	2	AQILAGGR2	190940	188025	192012
B2GV15	B2GV15	B2GV15_RAT	Dbt	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	AQIMNVSWSADHR	AQIMNVSWSADHR	3	AQIMNVSWSADHR3	10786.5	12495.9	12616.1
A0A0G2JZS1	A0A0G2JZS1	A0A0G2JZS1_RAT	Kpna6	Importin subunit alpha	1	AQIQAVIDANIFPVLIEILQK	AQIQAVIDANIFPVLIEILQK	3	AQIQAVIDANIFPVLIEILQK3	6172.75		
D3ZHV2	D3ZHV2;A0A8I5ZQD4	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	0	AQIQEQK	AQIQEQK	2	AQIQEQK2			75655.3
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	AQIQQFHSQIAAQTSASVLAEELHK	AQIQQFHSQIAAQTSASVLAEELHK	4	AQIQQFHSQIAAQTSASVLAEELHK4	11029.3	3862.9	6722.06
O35509	O35509;P62494	RB11B_RAT	Rab11b	Ras-related protein Rab-11B	0	AQIWDTAGQER	AQIWDTAGQER	2	AQIWDTAGQER2	1.66891e+06	1.67825e+06	1.71627e+06
Q9QY17	Q9QY17;Q9Z0W5	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	0	AQKPWAK	AQKPWAK	2	AQKPWAK2	50108.3	44211	42218.5
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	AQLAAITLIIGTFER	AQLAAITLIIGTFER	2	AQLAAITLIIGTFER2	10454.8		
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	AQLADSFHLQQFFR	AQLADSFHLQQFFR	2	AQLADSFHLQQFFR2	15615.6	8197.88	20608.3
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	AQLADSFHLQQFFR	AQLADSFHLQQFFR	3	AQLADSFHLQQFFR3	699688	766607	820044
A0A8I6A6I4	A0A8I6A6I4	A0A8I6A6I4_RAT	Atp11b	Phospholipid-transporting ATPase	1	AQLAEAPSGVK	AQLAEAPSGVK	2	AQLAEAPSGVK2	9337.53	4193.92	7458.21
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	AQLAELELELSEGDITQK	AQLAELELELSEGDITQK	3	AQLAELELELSEGDITQK3	2689.61	4268.39	
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	AQLDSFVK	AQLDSFVK	2	AQLDSFVK2	36727.4	26854	34172.6
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	AQLEAEPCR	AQLEAEPC(UniMod:4)R	2	AQLEAEPC(UniMod:4)R2	32804.2	20272	37414.9
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	AQLEAWR	AQLEAWR	2	AQLEAWR2	102054	80592	112019
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	AQLEEQGQELQMTK	AQLEEQGQELQMTK	2	AQLEEQGQELQMTK2	101556	108412	129646
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	AQLEEQGQELQMTK	AQLEEQGQELQMTK	3	AQLEEQGQELQMTK3	11407	16753.5	24636.9
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	AQLEEQLK	AQLEEQLK	2	AQLEEQLK2	186588	187018	168854
D3ZTC4	D3ZTC4	D3ZTC4_RAT	Ccdc88b	Coiled-coil domain containing 88B	1	AQLEIQSQK	AQLEIQSQK	2	AQLEIQSQK2	4316.27	3567.99	7391.8
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	AQLELEVSK	AQLELEVSK	2	AQLELEVSK2	108316	149470	132746
A0A8I5ZKS4	A0A8I5ZKS4	A0A8I5ZKS4_RAT	Hycc1	Family with sequence similarity 126, member A	1	AQLELYPEPLLVANAIK	AQLELYPEPLLVANAIK	2	AQLELYPEPLLVANAIK2	4958.6	18693.3	23639.3
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	AQLEPLQQHLQDSQQEISSMQMR	AQLEPLQQHLQDSQQEISSMQMR	3	AQLEPLQQHLQDSQQEISSMQMR3	143057	135703	167181
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	AQLEPLQQHLQDSQQEISSMQMR	AQLEPLQQHLQDSQQEISSMQMR	4	AQLEPLQQHLQDSQQEISSMQMR4	2192.14	6276.28	14348.3
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	AQLEQGGAALR	AQLEQGGAALR	2	AQLEQGGAALR2	63084.1	67136.5	60142.9
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	AQLEQGGAALRR	AQLEQGGAALRR	3	AQLEQGGAALRR3	21693.7	42490.2	26030.5
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	AQLEQSK	AQLEQSK	1	AQLEQSK1			1597.49
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	AQLEQSK	AQLEQSK	2	AQLEQSK2			35639
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	AQLEQSVEENKER	AQLEQSVEENKER	2	AQLEQSVEENKER2	2125.24		1055.65
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	AQLEQSVEENKER	AQLEQSVEENKER	3	AQLEQSVEENKER3	50485.3	62875.4	65884.5
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	AQLESHVGQLMESLK	AQLESHVGQLMESLK	2	AQLESHVGQLMESLK2	6773.64	7434.39	13045.1
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	AQLESHVGQLMESLK	AQLESHVGQLMESLK	3	AQLESHVGQLMESLK3	111526	99245.6	87548.6
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	AQLETILR	AQLETILR	2	AQLETILR2	18713	15235.5	23327.5
A0A8I5ZY29	A0A8I5ZY29	A0A8I5ZY29_RAT	Usp14	Ubiquitin carboxyl-terminal hydrolase	1	AQLFALTGVQPAR	AQLFALTGVQPAR	2	AQLFALTGVQPAR2	16018.7	11140.5	11347.1
A0A096MKB0	A0A096MKB0	A0A096MKB0_RAT	Rab24	Max dimerization protein 3	1	AQLFETSSK	AQLFETSSK	2	AQLFETSSK2	5783.29		4577.34
A0A0G2K9K4	A0A0G2K9K4	A0A0G2K9K4_RAT	Tfg	Trafficking from ER to golgi regulator	1	AQLGEDIR	AQLGEDIR	2	AQLGEDIR2	222760	200637	193285
F7ELS2	F7ELS2	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	1	AQLGVQAFADALLIIPK	AQLGVQAFADALLIIPK	2	AQLGVQAFADALLIIPK2	27327	3813.12	
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	AQLHDTNMELTDLK	AQLHDTNMELTDLK	2	AQLHDTNMELTDLK2	9271.29	6230.77	6195.48
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	AQLHDTNMELTDLK	AQLHDTNMELTDLK	3	AQLHDTNMELTDLK3	155155	155847	180849
F7FMS0	F7FMS0	F7FMS0_RAT	Mst1	Macrophage stimulating 1	1	AQLHHSSLCDLFQK	AQLHHSSLC(UniMod:4)DLFQK	3	AQLHHSSLC(UniMod:4)DLFQK3	3715.8	6609.84	6816.3
F7FMS0	F7FMS0	F7FMS0_RAT	Mst1	Macrophage stimulating 1	1	AQLHHSSLCDLFQK	AQLHHSSLC(UniMod:4)DLFQK	4	AQLHHSSLC(UniMod:4)DLFQK4	10917.1	11267.8	12074.7
Q2YDU8	Q2YDU8	SPNS1_RAT	Spns1	Protein spinster homolog 1	1	AQLHVQGLLHETEPSDDQIVVPQR	AQLHVQGLLHETEPSDDQIVVPQR	3	AQLHVQGLLHETEPSDDQIVVPQR3	3510.06	1665.77	
Q2YDU8	Q2YDU8	SPNS1_RAT	Spns1	Protein spinster homolog 1	1	AQLHVQGLLHETEPSDDQIVVPQR	AQLHVQGLLHETEPSDDQIVVPQR	4	AQLHVQGLLHETEPSDDQIVVPQR4	18387.5	12018.6	12710.2
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	AQLIMQAEAEAESVR	AQLIMQAEAEAESVR	2	AQLIMQAEAEAESVR2	17172.6	19830.3	20276.9
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	AQLIMQAEAEAESVR	AQLIMQAEAEAESVR	3	AQLIMQAEAEAESVR3	5338.51	5160.41	8861.67
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	AQLLDYEK	AQLLDYEK	2	AQLLDYEK2	38686.3	44015.9	52752.7
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	AQLLEPSK	AQLLEPSK	1	AQLLEPSK1	1083.55	2112.98	2066.03
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	AQLLEPSK	AQLLEPSK	2	AQLLEPSK2	127657	186226	156256
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	AQLLGGVDEAMSLLQDMQSR	AQLLGGVDEAMSLLQDMQSR	3	AQLLGGVDEAMSLLQDMQSR3	85411.6	160338	91260.1
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	AQLLQPTLEINPR	AQLLQPTLEINPR	2	AQLLQPTLEINPR2	78851.8	77545.4	81434.4
B5DF86	B5DF86	B5DF86_RAT	Cog8	Conserved oligomeric Golgi complex subunit 8	1	AQLLQQTR	AQLLQQTR	2	AQLLQQTR2	71754	69467	56256.8
Q05695	Q05695	L1CAM_RAT	L1cam	Neural cell adhesion molecule L1	1	AQLLVVGSPGPVPHLELSDR	AQLLVVGSPGPVPHLELSDR	3	AQLLVVGSPGPVPHLELSDR3	27395.7	26656.2	23756.3
P62919	P62919;D4A6W6	RL8_RAT	Rpl8	Large ribosomal subunit protein uL2	0	AQLNIGNVLPVGTMPEGTIVCCLEEKPGDR	AQLNIGNVLPVGTMPEGTIVC(UniMod:4)C(UniMod:4)LEEKPGDR	4	AQLNIGNVLPVGTMPEGTIVC(UniMod:4)C(UniMod:4)LEEKPGDR4	8185.93	3799.23	12215.8
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	AQLNYWSAK	AQLNYWSAK	2	AQLNYWSAK2	10415.7	8946.73	5852.46
P49445	P49445	PTN7_RAT	Ptpn7	Tyrosine-protein phosphatase non-receptor type 7	1	AQLPTLSLGADMTQPPPAK	AQLPTLSLGADMTQPPPAK	2	AQLPTLSLGADMTQPPPAK2		8698.82	
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	AQLQDAGVYECESK	AQLQDAGVYEC(UniMod:4)ESK	2	AQLQDAGVYEC(UniMod:4)ESK2	80431.7	65644.9	72309.4
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	AQLQDAGVYECESK	AQLQDAGVYEC(UniMod:4)ESK	3	AQLQDAGVYEC(UniMod:4)ESK3	23996.2	27312.4	30527.5
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	AQLQEER	AQLQEER	2	AQLQEER2	25303.1	29327.5	27316.2
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	AQLQESQDQTK	AQLQESQDQTK	2	AQLQESQDQTK2	24079.7		18903.1
A0A8I5Y652	A0A8I5Y652	A0A8I5Y652_RAT	Tacc3	Transforming, acidic coiled-coil containing protein 3	1	AQLQIQSLEK	AQLQIQSLEK	2	AQLQIQSLEK2	5112.75	7586.66	5301.22
Q5FVC7	Q5FVC7	ACAP2_RAT	Acap2	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2	1	AQLQNFVK	AQLQNFVK	2	AQLQNFVK2	5646.22		
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	AQLQQEAGAEPDLGAEPAAALGLLAER	AQLQQEAGAEPDLGAEPAAALGLLAER	3	AQLQQEAGAEPDLGAEPAAALGLLAER3	296593	272708	348182
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	AQLSATVLTLLIK	AQLSATVLTLLIK	2	AQLSATVLTLLIK2	9063.43	16242.8	12187.3
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	AQLSATVLTLLIK	AQLSATVLTLLIK	3	AQLSATVLTLLIK3	5322.51	4914.31	4230.42
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	AQLSDAGSYR	AQLSDAGSYR	2	AQLSDAGSYR2	46526	71936	47781.6
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	AQLSPVSSK	AQLSPVSSK	2	AQLSPVSSK2	56123.3	58416.6	64031.3
A0A8I6APP3	A0A8I6APP3	A0A8I6APP3_RAT	Plekho2	Pleckstrin homology domain containing O2	1	AQLSSSETPEAAPR	AQLSSSETPEAAPR	2	AQLSSSETPEAAPR2	209982	203233	223393
A0A8I6APP3	A0A8I6APP3	A0A8I6APP3_RAT	Plekho2	Pleckstrin homology domain containing O2	1	AQLSSSETPEAAPR	AQLSSSETPEAAPR	3	AQLSSSETPEAAPR3	26995.2	23815.7	24309.7
O35346	O35346	FAK1_RAT	Ptk2	Focal adhesion kinase 1	1	AQLSTILEEEK	AQLSTILEEEK	2	AQLSTILEEEK2	15521.3	10599.1	17575.8
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	AQLSVVDPDSAPGEIEYEVQR	AQLSVVDPDSAPGEIEYEVQR	3	AQLSVVDPDSAPGEIEYEVQR3	33821.6	51064.2	38078.6
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	AQLTDLLSEQR	AQLTDLLSEQR	2	AQLTDLLSEQR2	56949.6	58116.6	48465.5
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	AQLTDLLSEQR	AQLTDLLSEQR	3	AQLTDLLSEQR3	7001.17	6544.11	8289.36
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	AQLTEQMK	AQLTEQMK	2	AQLTEQMK2	56142	71998.2	70540
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	AQLVDTADK	AQLVDTADK	2	AQLVDTADK2	12995	11292.7	5989.49
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	AQLVDTADKFR	AQLVDTADKFR	3	AQLVDTADKFR3	31095.3	35907.3	51785
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	AQLVLTACESLLTSQR	AQLVLTAC(UniMod:4)ESLLTSQR	2	AQLVLTAC(UniMod:4)ESLLTSQR2	23548.5	12410	10744.5
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	AQLVLTACESLLTSQR	AQLVLTAC(UniMod:4)ESLLTSQR	3	AQLVLTAC(UniMod:4)ESLLTSQR3	12089.7	16787.1	
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	AQLYIDCDK	AQLYIDC(UniMod:4)DK	2	AQLYIDC(UniMod:4)DK2	168062	86004.5	143485
A0A0G2K098	A0A0G2K098	A0A0G2K098_RAT	Mcc	MCC regulator of WNT signaling pathway	1	AQLYLLEK	AQLYLLEK	2	AQLYLLEK2		3487.41	3914.03
Q3B7U1	Q3B7U1	Q3B7U1_RAT	Maged2	MAGE family member D2	1	AQMGIGLGSENAAGPCNWDEADIGPWAK	AQMGIGLGSENAAGPC(UniMod:4)NWDEADIGPWAK	3	AQMGIGLGSENAAGPC(UniMod:4)NWDEADIGPWAK3	576.721	4176.95	2210.13
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	AQMGSAGLR	AQMGSAGLR	2	AQMGSAGLR2	176296	165393	170500
D3ZTC4	D3ZTC4	D3ZTC4_RAT	Ccdc88b	Coiled-coil domain containing 88B	1	AQMLLAEVSR	AQMLLAEVSR	2	AQMLLAEVSR2	6944.53	4917.59	2195.01
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	AQMLLDQYR	AQMLLDQYR	2	AQMLLDQYR2	25162.7	28958.7	24579.7
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	AQMLLDQYRK	AQMLLDQYRK	3	AQMLLDQYRK3	10285.2	9356.88	9608.57
O35763	O35763	MOES_RAT	Msn	Moesin	1	AQMVQEDLEK	AQMVQEDLEK	2	AQMVQEDLEK2	323691	274919	318600
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	AQNAADSYSWIPER	AQNAADSYSWIPER	2	AQNAADSYSWIPER2	190040	201595	204773
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	AQNAADSYSWIPER	AQNAADSYSWIPER	3	AQNAADSYSWIPER3	68052.4	65266.9	59385.6
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	AQNCNILLSR	AQNC(UniMod:4)NILLSR	2	AQNC(UniMod:4)NILLSR2	88642.5	86873.9	100946
F7F288	F7F288	F7F288_RAT	Bcap29	B-cell receptor-associated protein	1	AQNDVMTMK	AQNDVMTMK	2	AQNDVMTMK2	147691	144255	149576
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	AQNEEMEKDLR	AQNEEMEKDLR	2	AQNEEMEKDLR2	1550.11		
Q9QXY4	Q9QXY4	OGFR_RAT	Ogfr	Opioid growth factor receptor	1	AQNFQPR	AQNFQPR	2	AQNFQPR2	56211	67013.8	53903.4
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	AQNGEFMTHK	AQNGEFMTHK	2	AQNGEFMTHK2	44557.8	36015.6	35509.3
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	AQNGEFMTHK	AQNGEFMTHK	3	AQNGEFMTHK3	55809.5	45815.7	62683.5
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	AQNKETNVLAAAK	AQNKETNVLAAAK	3	AQNKETNVLAAAK3	1161.93	4200.52	
Q64270	Q64270	EI2BA_RAT	Eif2b1	Translation initiation factor eIF-2B subunit alpha	1	AQNKPFYVVAESFK	AQNKPFYVVAESFK	3	AQNKPFYVVAESFK3	19600.9	31369.4	32335.3
F1M4U0	F1M4U0	F1M4U0_RAT	Ccnyl1	Cyclin Y-like 1	1	AQNLEAISR	AQNLEAISR	2	AQNLEAISR2	5460.13	6015.82	12216.9
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	AQNPPEDDEVLIER	AQNPPEDDEVLIER	2	AQNPPEDDEVLIER2	20049.6	24002.8	
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	AQNQVLK	AQNQVLK	2	AQNQVLK2	10961.7	14027.1	13163.3
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	AQNVMQEEDLIDEDDILVR	AQNVMQEEDLIDEDDILVR	3	AQNVMQEEDLIDEDDILVR3	30218.5	23907.9	33510.7
Q32PX6	Q32PX6	Q32PX6_RAT	Rhog	Ras homolog family member G	1	AQPDTLRR	AQPDTLRR	2	AQPDTLRR2			12708.1
P97532	P97532	THTM_RAT	Mpst	3-mercaptopyruvate sulfurtransferase	1	AQPEHVISQGR	AQPEHVISQGR	2	AQPEHVISQGR2	32667.7	28550	29098.3
P97532	P97532	THTM_RAT	Mpst	3-mercaptopyruvate sulfurtransferase	1	AQPEHVISQGR	AQPEHVISQGR	3	AQPEHVISQGR3	80317.4	63963.9	87689.6
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	AQPPCYYGAHGLWR	AQPPC(UniMod:4)YYGAHGLWR	2	AQPPC(UniMod:4)YYGAHGLWR2	3715.65		6429.85
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	AQPPCYYGAHGLWR	AQPPC(UniMod:4)YYGAHGLWR	3	AQPPC(UniMod:4)YYGAHGLWR3	36016.2	46129.5	42008.5
A0A8I5ZS17	A0A8I5ZS17	A0A8I5ZS17_RAT	Snx25	Sorting nexin 25	1	AQPPDFASSWSR	AQPPDFASSWSR	2	AQPPDFASSWSR2	15971.5	17834.3	13573.5
F1M386	F1M386	RPGF2_RAT	Rapgef2	Rap guanine nucleotide exchange factor 2	1	AQPQQPLAPPQPSHK	AQPQQPLAPPQPSHK	3	AQPQQPLAPPQPSHK3	5590.86	3972.35	14113.6
P04638	P04638	APOA2_RAT	Apoa2	Apolipoprotein A-II	1	AQPSEIQNQAK	AQPSEIQNQAK	2	AQPSEIQNQAK2	1.16383e+07	1.21981e+07	1.16601e+07
P04638	P04638	APOA2_RAT	Apoa2	Apolipoprotein A-II	1	AQPSEIQNQAK	AQPSEIQNQAK	3	AQPSEIQNQAK3			5122.68
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	AQPSLFAEMLR	AQPSLFAEMLR	2	AQPSLFAEMLR2	7126.74	4529.96	10279.6
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	AQPSQAADEPAEK	AQPSQAADEPAEK	2	AQPSQAADEPAEK2	3.66952e+06		3.81968e+06
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	AQPSQAADEPAEK	AQPSQAADEPAEK	3	AQPSQAADEPAEK3	7390.51	8351.88	2876.76
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	AQPSVVLSAAHTVAAR	AQPSVVLSAAHTVAAR	3	AQPSVVLSAAHTVAAR3	16997.4	12273.2	18137.1
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	AQPVLYWCAR	AQPVLYWC(UniMod:4)AR	2	AQPVLYWC(UniMod:4)AR2	28183.5	30070.4	31392.5
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	AQPVVMATVQLMVQDSLNPTLK	AQPVVMATVQLMVQDSLNPTLK	3	AQPVVMATVQLMVQDSLNPTLK3	670587	707101	673249
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	AQPVVMATVQLMVQDSLNPTLK	AQPVVMATVQLMVQDSLNPTLK	4	AQPVVMATVQLMVQDSLNPTLK4	2101.51	3573.19	2391.81
A0A096MKE0	A0A096MKE0	A0A096MKE0_RAT	Asph	Aspartate-beta-hydroxylase	1	AQPWWTPR	AQPWWTPR	2	AQPWWTPR2	41572.1	38868.9	35468
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	AQQAEGENSSVR	AQQAEGENSSVR	2	AQQAEGENSSVR2			2624.9
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	AQQALSELHTVDK	AQQALSELHTVDK	2	AQQALSELHTVDK2	4419.87	3085.61	5130.77
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	AQQALSELHTVDK	AQQALSELHTVDK	3	AQQALSELHTVDK3	22701.9	21905.8	28666.9
P19511	P19511	AT5F1_RAT	Atp5pb	ATP synthase F(0) complex subunit B1, mitochondrial	1	AQQALVQK	AQQALVQK	1	AQQALVQK1	23877.2	17072.4	19473.7
P19511	P19511	AT5F1_RAT	Atp5pb	ATP synthase F(0) complex subunit B1, mitochondrial	1	AQQALVQK	AQQALVQK	2	AQQALVQK2	654839	717200	739622
Q1RP74	Q1RP74	Q1RP74_RAT	Tbcb	Tubulin folding cofactor B	1	AQQEAEAAQR	AQQEAEAAQR	2	AQQEAEAAQR2			291102
A0A8J8YHW4	A0A8J8YHW4	A0A8J8YHW4_RAT	Clk2	Secretory carrier-associated membrane protein	1	AQQEFAAGVFSNPAVR	AQQEFAAGVFSNPAVR	2	AQQEFAAGVFSNPAVR2	66012.5	72911.7	67314.4
A0A8J8YHW4	A0A8J8YHW4	A0A8J8YHW4_RAT	Clk2	Secretory carrier-associated membrane protein	1	AQQEFAAGVFSNPAVR	AQQEFAAGVFSNPAVR	3	AQQEFAAGVFSNPAVR3	21439.7	33043.7	27128.7
P56603	P56603	SCAM1_RAT	Scamp1	Secretory carrier-associated membrane protein 1	1	AQQEFATGVMSNK	AQQEFATGVMSNK	2	AQQEFATGVMSNK2	148278	142389	156582
P56603	P56603	SCAM1_RAT	Scamp1	Secretory carrier-associated membrane protein 1	1	AQQEFATGVMSNK	AQQEFATGVMSNK	3	AQQEFATGVMSNK3	10444.4	12555.5	
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	AQQEHQSLLEK	AQQEHQSLLEK	3	AQQEHQSLLEK3	5600.43	10079.3	8808.59
Q4V897	Q4V897	CC90B_RAT	Ccdc90b	Coiled-coil domain-containing protein 90B, mitochondrial	1	AQQEITIQQLMAHLDSIR	AQQEITIQQLMAHLDSIR	3	AQQEITIQQLMAHLDSIR3	15296	6247.25	5278.05
Q4V897	Q4V897	CC90B_RAT	Ccdc90b	Coiled-coil domain-containing protein 90B, mitochondrial	1	AQQEITIQQLMAHLDSIRK	AQQEITIQQLMAHLDSIRK	4	AQQEITIQQLMAHLDSIRK4	2266.4		9058.94
O35763	O35763	MOES_RAT	Msn	Moesin	1	AQQELEEQTR	AQQELEEQTR	2	AQQELEEQTR2	57377.5	32215	44377.7
O35763	O35763	MOES_RAT	Msn	Moesin	1	AQQELEEQTRR	AQQELEEQTRR	3	AQQELEEQTRR3	217995	201508	
Q5U2U0	Q5U2U0	CLPX_RAT	Clpx	ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial	1	AQQGIVFLDEVDK	AQQGIVFLDEVDK	2	AQQGIVFLDEVDK2	1198.93		3605.81
Q3LUD3	Q3LUD3	N4BP3_RAT	N4bp3	Nedd4 binding protein 3	1	AQQGLAPEPR	AQQGLAPEPR	2	AQQGLAPEPR2	1756.9	2353.09	
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	AQQHIETCWK	AQQHIETC(UniMod:4)WK	2	AQQHIETC(UniMod:4)WK2	6066.9	3362.5	
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	AQQHIETCWK	AQQHIETC(UniMod:4)WK	3	AQQHIETC(UniMod:4)WK3	15974	22986	21039.4
Q06000	Q06000	LIPL_RAT	Lpl	Lipoprotein lipase	1	AQQHYPVSAGYTK	AQQHYPVSAGYTK	2	AQQHYPVSAGYTK2	10648.4	12746.2	14115.2
Q06000	Q06000	LIPL_RAT	Lpl	Lipoprotein lipase	1	AQQHYPVSAGYTK	AQQHYPVSAGYTK	3	AQQHYPVSAGYTK3	103269	106172	96796.8
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	AQQIQVLQK	AQQIQVLQK	2	AQQIQVLQK2	1.33474e+07	1.1935e+07	1.10184e+07
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	AQQIQVLQKDVR	AQQIQVLQKDVR	3	AQQIQVLQKDVR3	14348.5	8954.27	12796.4
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	AQQIQVLQKDVRDQLIDMK	AQQIQVLQKDVRDQLIDMK	3	AQQIQVLQKDVRDQLIDMK3	7890.89	4705.68	2357.68
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	AQQLANVEAK	AQQLANVEAK	2	AQQLANVEAK2	139243	111876	144395
Q6AYK3	Q6AYK3	INO1_RAT	Isyna1	Inositol-3-phosphate synthase 1	1	AQQLEQIR	AQQLEQIR	2	AQQLEQIR2	6004.97	3858.26	7191.46
O08773	O08773	RGS14_RAT	Rgs14	Regulator of G-protein signaling 14	1	AQQLQIFNLMK	AQQLQIFNLMK	2	AQQLQIFNLMK2	20100.1	22049.9	23197.3
Q3SWS8	Q3SWS8	RAE1L_RAT	Rae1	mRNA export factor	1	AQQMHTGPVLDVCWSDDGSK	AQQMHTGPVLDVC(UniMod:4)WSDDGSK	3	AQQMHTGPVLDVC(UniMod:4)WSDDGSK3	6638.92	10008	8509.71
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	AQQPVSGPLVR	AQQPVSGPLVR	2	AQQPVSGPLVR2	156432	190454	157198
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	AQQQAAALAK	AQQQAAALAK	2	AQQQAAALAK2	28193.9	35756.7	24804.1
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	AQQQLAFLEGR	AQQQLAFLEGR	2	AQQQLAFLEGR2	35527.6	38099	35370.8
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	AQQQLEQEFNQK	AQQQLEQEFNQK	2	AQQQLEQEFNQK2	7980.46	5996.68	13818.8
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	AQQQLNGK	AQQQLNGK	2	AQQQLNGK2			13927.4
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	AQQQPLLR	AQQQPLLR	2	AQQQPLLR2	707304	664705	584170
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	AQQQQNLSGLSTLSR	AQQQQNLSGLSTLSR	2	AQQQQNLSGLSTLSR2	2965.29	5762.86	
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	AQQSLNFIHSK	AQQSLNFIHSK	3	AQQSLNFIHSK3	13385.2	11685.4	14539.5
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	AQQSYER	AQQSYER	2	AQQSYER2			152896
A0A8I6AE35	A0A8I6AE35	A0A8I6AE35_RAT	Ube2q2	Ubiquitin conjugating enzyme E2 Q2	1	AQQSYNSIVQIHEK	AQQSYNSIVQIHEK	3	AQQSYNSIVQIHEK3	2421.88	4180.85	
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	AQQTFFAALGAYNFCCR	AQQTFFAALGAYNFC(UniMod:4)C(UniMod:4)R	3	AQQTFFAALGAYNFC(UniMod:4)C(UniMod:4)R3			2036.15
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	AQQVAVQEQEIAR	AQQVAVQEQEIAR	2	AQQVAVQEQEIAR2	26584.8	43995.2	38370.2
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	AQQVAVQEQEIAR	AQQVAVQEQEIAR	3	AQQVAVQEQEIAR3	5451.49	3932.65	4197.79
Q62763	Q62763	KC1G3_RAT	Csnk1g3	Casein kinase I isoform gamma-3	1	AQQVIHIIDFGLAK	AQQVIHIIDFGLAK	3	AQQVIHIIDFGLAK3	5470.37	5501.09	7191.21
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	AQQVLAALESMTLSK	AQQVLAALESMTLSK	2	AQQVLAALESMTLSK2	9484.56		24948.5
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	AQQVLAALESMTLSK	AQQVLAALESMTLSK	3	AQQVLAALESMTLSK3	5658.46	9881	4620.97
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	AQQVSQGLDVLTAK	AQQVSQGLDVLTAK	2	AQQVSQGLDVLTAK2	1.33257e+06	1.31129e+06	1.32328e+06
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	AQQVSQGLDVLTAK	AQQVSQGLDVLTAK	3	AQQVSQGLDVLTAK3	172173	171147	174543
D3ZY16	D3ZY16	D3ZY16_RAT	Trim65	Tripartite motif-containing 65	1	AQQVTHHFQAQSPAR	AQQVTHHFQAQSPAR	3	AQQVTHHFQAQSPAR3	2597.65	1359.53	
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	AQQYFEK	AQQYFEK	2	AQQYFEK2	17275.2	25317.8	22017.8
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	AQQYLDMCWK	AQQYLDMC(UniMod:4)WK	2	AQQYLDMC(UniMod:4)WK2	105357	111857	109353
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	AQREPLLTLVK	AQREPLLTLVK	3	AQREPLLTLVK3	61882.7	66517.8	46303.9
E9PU03	E9PU03	E9PU03_RAT	Smg5	Nonsense-mediated mRNA decay factor	1	AQSAMSPYLIPDTQALCYHLPVIR	AQSAMSPYLIPDTQALC(UniMod:4)YHLPVIR	3	AQSAMSPYLIPDTQALC(UniMod:4)YHLPVIR3	8514.06	4778.87	9200.12
O35760	O35760	IDI1_RAT	Idi1	Isopentenyl-diphosphate Delta-isomerase 1	1	AQSDGIWGEHEIDYILFLR	AQSDGIWGEHEIDYILFLR	3	AQSDGIWGEHEIDYILFLR3	6100.75		5071.59
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	AQSEGRPCEYNSR	AQSEGRPC(UniMod:4)EYNSR	3	AQSEGRPC(UniMod:4)EYNSR3			155157
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	AQSEHFINLR	AQSEHFINLR	2	AQSEHFINLR2	15858.5	19527.3	18244.2
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	AQSEHFINLR	AQSEHFINLR	3	AQSEHFINLR3	497463	376720	409673
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	AQSELAAHQK	AQSELAAHQK	2	AQSELAAHQK2			55842.6
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	AQSELAAHQKK	AQSELAAHQKK	2	AQSELAAHQKK2			2346.48
P35434	P35434	ATPD_RAT	Atp5f1d	ATP synthase subunit delta, mitochondrial	1	AQSELSGAADEAAR	AQSELSGAADEAAR	2	AQSELSGAADEAAR2	508689	436961	453456
P35434	P35434	ATPD_RAT	Atp5f1d	ATP synthase subunit delta, mitochondrial	1	AQSELSGAADEAAR	AQSELSGAADEAAR	3	AQSELSGAADEAAR3	25759.9	18066.6	19577.8
A0A8I5ZKS4	A0A8I5ZKS4	A0A8I5ZKS4_RAT	Hycc1	Family with sequence similarity 126, member A	1	AQSENLELLSLK	AQSENLELLSLK	2	AQSENLELLSLK2	15311.2	20462.9	15454
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	AQSFDVASAPAAAEWAVPQSSR	AQSFDVASAPAAAEWAVPQSSR	3	AQSFDVASAPAAAEWAVPQSSR3	20890.9	24421.4	16901.9
A0A8I6GIL4	A0A8I6GIL4	A0A8I6GIL4_RAT	Tmem87a	Transmembrane protein 87A	1	AQSFSGDLMHR	AQSFSGDLMHR	2	AQSFSGDLMHR2	5790.57	5883.62	9245.64
A0A8I6GIL4	A0A8I6GIL4	A0A8I6GIL4_RAT	Tmem87a	Transmembrane protein 87A	1	AQSFSGDLMHR	AQSFSGDLMHR	3	AQSFSGDLMHR3	26286.3	24783.7	24860
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	AQSLEEFIK	AQSLEEFIK	2	AQSLEEFIK2	18804.5	36504.4	30636.1
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	AQSLLSAGHPEGEQIIR	AQSLLSAGHPEGEQIIR	2	AQSLLSAGHPEGEQIIR2	8679.73	7224.05	4688.67
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	AQSLLSAGHPEGEQIIR	AQSLLSAGHPEGEQIIR	3	AQSLLSAGHPEGEQIIR3	140395	190253	148079
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	AQSLLSTDR	AQSLLSTDR	2	AQSLLSTDR2	175851	139694	188341
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	AQSLLSTDREASIDILHSIVK	AQSLLSTDREASIDILHSIVK	3	AQSLLSTDREASIDILHSIVK3	12455.3	25845.9	18179
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	AQSLLSTDREASIDILHSIVK	AQSLLSTDREASIDILHSIVK	4	AQSLLSTDREASIDILHSIVK4	14055.4	19993.8	23034
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	AQSLPLPSLAGPDASVGK	AQSLPLPSLAGPDASVGK	2	AQSLPLPSLAGPDASVGK2	27606.3	45522.7	42947.4
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	AQSLSPALLK	AQSLSPALLK	2	AQSLSPALLK2	24883.9	34379.1	33063
Q6XUX2	Q6XUX2	DUSTY_RAT	Dstyk	Dual serine/threonine and tyrosine protein kinase	1	AQSMLVEQSEK	AQSMLVEQSEK	2	AQSMLVEQSEK2	4249.25	6956.17	4390.42
D4A748	D4A748	D4A748_RAT	Wdfy4	WDFY family member 4	1	AQSPSVIQYLR	AQSPSVIQYLR	2	AQSPSVIQYLR2	3816.71	6828.75	3280.87
Q5XIS9	Q5XIS9	KPCD2_RAT	Prkd2	Serine/threonine-protein kinase D2	1	AQSSLGYIPLMR	AQSSLGYIPLMR	2	AQSSLGYIPLMR2	5319.68	4598.92	1412.98
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	AQSSVDDLER	AQSSVDDLER	2	AQSSVDDLER2	238582	210973	194990
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	AQSTDSLGTSSSLQSK	AQSTDSLGTSSSLQSK	2	AQSTDSLGTSSSLQSK2	7675.54	4388.06	3074.42
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	AQSTGGSSDPALHEK	AQSTGGSSDPALHEK	2	AQSTGGSSDPALHEK2	1939.73		3215.11
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	AQSTGGSSDPALHEK	AQSTGGSSDPALHEK	3	AQSTGGSSDPALHEK3	5409.62		
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	AQSTYFNDPK	AQSTYFNDPK	2	AQSTYFNDPK2	126967	152914	158833
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	AQSVLEEDHYGMEDVK	AQSVLEEDHYGMEDVK	3	AQSVLEEDHYGMEDVK3	24481.8	19481.1	22853.9
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	AQSVLEEDHYGMEDVKK	AQSVLEEDHYGMEDVKK	3	AQSVLEEDHYGMEDVKK3	13843.9	14346.2	15647.4
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	AQSVLEEDHYGMEDVKK	AQSVLEEDHYGMEDVKK	4	AQSVLEEDHYGMEDVKK4	39890.8	48458	53694.9
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	AQSVSLEGSAPSPSPTHTHHR	AQSVSLEGSAPSPSPTHTHHR	3	AQSVSLEGSAPSPSPTHTHHR3	86869.5	71340.8	49330.5
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	AQSVSLEGSAPSPSPTHTHHR	AQSVSLEGSAPSPSPTHTHHR	4	AQSVSLEGSAPSPSPTHTHHR4	481618	575232	474682
P48450	P48450	LSS_RAT	Lss	Lanosterol synthase	1	AQTAHEGALNGVTFYAK	AQTAHEGALNGVTFYAK	3	AQTAHEGALNGVTFYAK3		6339.74	16027.4
Q9JHW5	Q9JHW5	VAMP7_RAT	Vamp7	Vesicle-associated membrane protein 7	1	AQTALPYAMNSEFSSVLAAQLK	AQTALPYAMNSEFSSVLAAQLK	3	AQTALPYAMNSEFSSVLAAQLK3	25184.6	39183.6	34285.3
E9PU15	E9PU15	E9PU15_RAT	Dicer1	Endoribonuclease Dicer	1	AQTASDAGVGVR	AQTASDAGVGVR	2	AQTASDAGVGVR2	4204.43	1955.74	5083.9
Q5XIC3	Q5XIC3	CD37L_RAT	Cdc37l1	Hsp90 co-chaperone Cdc37-like 1	1	AQTAVSELR	AQTAVSELR	2	AQTAVSELR2	5548.83	11481.4	7402.08
P37136	P37136	ACES_RAT	Ache	Acetylcholinesterase	1	AQTCAFWNR	AQTC(UniMod:4)AFWNR	2	AQTC(UniMod:4)AFWNR2	129488	130852	140370
P60123	P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	1	AQTEGINISEEALNHLGEIGTK	AQTEGINISEEALNHLGEIGTK	3	AQTEGINISEEALNHLGEIGTK3	36474.9	37225.6	31148.9
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	AQTELQHQQK	AQTELQHQQK	2	AQTELQHQQK2			16061.4
Q9ET20	Q9ET20	SCAM4_RAT	Scamp4	Secretory carrier-associated membrane protein 4	1	AQTEWSAGTWR	AQTEWSAGTWR	2	AQTEWSAGTWR2	20463.5	30072.6	24336.6
Q76HM9	Q76HM9	HYAL3_RAT	Hyal3	Hyaluronidase-3	1	AQTGFEQAAR	AQTGFEQAAR	2	AQTGFEQAAR2	2086.72	7356.85	
P86172	P86172	NMRL1_RAT	Nmral1	NmrA-like family domain-containing protein 1	1	AQTLDQWLEQHK	AQTLDQWLEQHK	3	AQTLDQWLEQHK3	3093.67	6534.31	3329.32
Q63313	Q63313	LBP_RAT	Lbp	Lipopolysaccharide-binding protein	1	AQTLDVMFK	AQTLDVMFK	2	AQTLDVMFK2	69489.6	56446.7	68060.8
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	AQTLPTSVVTITSESSPGK	AQTLPTSVVTITSESSPGK	2	AQTLPTSVVTITSESSPGK2	610025	634146	628971
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	AQTLPTSVVTITSESSPGK	AQTLPTSVVTITSESSPGK	3	AQTLPTSVVTITSESSPGK3	130755	148940	132335
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	AQTLPTSVVTITSESSPGKR	AQTLPTSVVTITSESSPGKR	3	AQTLPTSVVTITSESSPGKR3	178705	196133	194565
A0A8I6A263	A0A8I6A263	A0A8I6A263_RAT	Aimp1	Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	1	AQTMANSGIK	AQTMANSGIK	2	AQTMANSGIK2	114367	51098.7	118998
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	AQTPVPGK	AQTPVPGK	2	AQTPVPGK2	429803	470805	454334
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	AQTSHANLR	AQTSHANLR	2	AQTSHANLR2			38576.9
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	AQTVDTEIAK	AQTVDTEIAK	2	AQTVDTEIAK2	44457.1	37656.5	44348.7
A0A8I5ZTW6	A0A8I5ZTW6	A0A8I5ZTW6_RAT	Gopc	Golgi associated PDZ and coiled-coil motif containing	1	AQTVSQINHK	AQTVSQINHK	2	AQTVSQINHK2			1229.23
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	AQVAAEK	AQVAAEK	1	AQVAAEK1			2423.62
Q68FP9	Q68FP9	COG6_RAT	Cog6	Conserved oligomeric Golgi complex subunit 6	1	AQVADAFLSK	AQVADAFLSK	2	AQVADAFLSK2	33588.8	33366.3	27961.3
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	AQVAFECDEDKDER	AQVAFEC(UniMod:4)DEDKDER	2	AQVAFEC(UniMod:4)DEDKDER2	5048.78	7238.16	
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	AQVAFECDEDKDER	AQVAFEC(UniMod:4)DEDKDER	3	AQVAFEC(UniMod:4)DEDKDER3	694597	690902	776401
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	AQVAFECDEDKDEREAPPR	AQVAFEC(UniMod:4)DEDKDEREAPPR	3	AQVAFEC(UniMod:4)DEDKDEREAPPR3	2139.66		
P62959	A0A8I6AVX1;P62959	HINT1_RAT	Hint1	Adenosine 5'-monophosphoramidase HINT1	0	AQVAQPGGDTIFGK	AQVAQPGGDTIFGK	2	AQVAQPGGDTIFGK2	43485.3	39503.5	46229.6
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	AQVASEAGAGVPR	AQVASEAGAGVPR	2	AQVASEAGAGVPR2	11206.3	6424.18	8379.61
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	AQVASEAGAGVPRPSGASSPEEPEEDR	AQVASEAGAGVPRPSGASSPEEPEEDR	3	AQVASEAGAGVPRPSGASSPEEPEEDR3	11819.8	8265.49	19223.1
Q3ZU82	Q3ZU82	GOGA5_RAT	Golga5	Golgin subfamily A member 5	1	AQVDDLTEAVAAK	AQVDDLTEAVAAK	2	AQVDDLTEAVAAK2	13461.6	22660	12499.2
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	AQVDPLVQSFSFQNLLQGR	AQVDPLVQSFSFQNLLQGR	3	AQVDPLVQSFSFQNLLQGR3			15523.7
D3ZTC4	D3ZTC4	D3ZTC4_RAT	Ccdc88b	Coiled-coil domain containing 88B	1	AQVEAAEQQVQALESQVR	AQVEAAEQQVQALESQVR	3	AQVEAAEQQVQALESQVR3	7177.44		4211.92
P70569	P70569	MYO5B_RAT	Myo5b	Unconventional myosin-Vb	1	AQVEAMKEEMDK	AQVEAMKEEMDK	3	AQVEAMKEEMDK3	4734.95	5101.92	6750.58
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	AQVEDAFR	AQVEDAFR	2	AQVEDAFR2	53689.8	52147.7	49933.9
P30427	P30427	PLEC_RAT	Plec	Plectin	1	AQVEQELTTLR	AQVEQELTTLR	2	AQVEQELTTLR2	4253.66	1546.47	
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	AQVEVLSAALR	AQVEVLSAALR	2	AQVEVLSAALR2	64323.3	67542.6	67292.1
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	AQVHVSEEGSEPEAMLQVLGPK	AQVHVSEEGSEPEAMLQVLGPK	3	AQVHVSEEGSEPEAMLQVLGPK3	17484.9	17836.4	12301
F7FIC1	F7FIC1	F7FIC1_RAT	Cdh19	Cadherin 19	1	AQVIDTTIGK	AQVIDTTIGK	2	AQVIDTTIGK2	3378.69	5970.31	5760.29
P62853	D3ZCH5;M0R763;P62853	RS25_RAT	Rps25	Small ribosomal subunit protein eS25	0	AQVIYTR	AQVIYTR	2	AQVIYTR2	41929.5	45870.3	30453.8
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	AQVLAGGR	AQVLAGGR	2	AQVLAGGR2	157379	172127	120983
D3ZYM7	D3ZYM7	D3ZYM7_RAT	Lyrm4	LYR motif containing 4	1	AQVLDLYR	AQVLDLYR	2	AQVLDLYR2	35853.8	40850.7	54793.3
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	AQVLPPLR	AQVLPPLR	2	AQVLPPLR2	72765.1	70476.7	38853.2
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	AQVMEVK	AQVMEVK	2	AQVMEVK2	167262	172509	139828
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	AQVPLVMK	AQVPLVMK	2	AQVPLVMK2	83966.7	83805.5	81057.5
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	AQVQDNESLSHLNR	AQVQDNESLSHLNR	2	AQVQDNESLSHLNR2	6903.88	4799.47	2759.8
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	AQVQDNESLSHLNR	AQVQDNESLSHLNR	3	AQVQDNESLSHLNR3	116035	106769	107163
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	AQVQQFLK	AQVQQFLK	2	AQVQQFLK2	42383.7	41540.2	40866.6
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	AQVQQLER	AQVQQLER	2	AQVQQLER2	11287	4249.58	12742.9
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	AQVSALENK	AQVSALENK	1	AQVSALENK1	4036.96	5147.11	3650.73
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	AQVSALENK	AQVSALENK	2	AQVSALENK2	123769	132860	127888
Q5XIH7	Q5XIH7	PHB2_RAT	Phb2	Prohibitin-2	1	AQVSLLIR	AQVSLLIR	2	AQVSLLIR2	248775	205803	210985
A0A1W2Q642	A0A1W2Q642	A0A1W2Q642_RAT	Pi16	Peptidase inhibitor 16	1	AQVSPPASDMLQMR	AQVSPPASDMLQMR	2	AQVSPPASDMLQMR2	9.41023e+06	9.96823e+06	1.11893e+07
A0A1W2Q642	A0A1W2Q642	A0A1W2Q642_RAT	Pi16	Peptidase inhibitor 16	1	AQVSPPASDMLQMR	AQVSPPASDMLQMR	3	AQVSPPASDMLQMR3	227025	203687	272027
Q6TMG5	Q6TMG5	NEMO_RAT	Ikbkg	NF-kappa-B essential modulator	1	AQVTSLLGELQESQSR	AQVTSLLGELQESQSR	2	AQVTSLLGELQESQSR2	21996.6	18348.4	20479.5
Q6TMG5	Q6TMG5	NEMO_RAT	Ikbkg	NF-kappa-B essential modulator	1	AQVTSLLGELQESQSR	AQVTSLLGELQESQSR	3	AQVTSLLGELQESQSR3	9768.08	14703.6	8280.93
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	AQVVDLLQK	AQVVDLLQK	2	AQVVDLLQK2	60316.5	77146.3	81457.3
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	AQVVFEDLNQELLEELPVLYNSR	AQVVFEDLNQELLEELPVLYNSR	3	AQVVFEDLNQELLEELPVLYNSR3	298244	352745	306119
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	AQVVFEDLNQELLEELPVLYNSR	AQVVFEDLNQELLEELPVLYNSR	4	AQVVFEDLNQELLEELPVLYNSR4	10792.7	12581	7667.43
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AQVVSNLK	AQVVSNLK	1	AQVVSNLK1	20153.6	10548.7	9342.05
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AQVVSNLK	AQVVSNLK	2	AQVVSNLK2	4.596e+06	4.88196e+06	4.833e+06
A0A0G2K6T9	A0A0G2K6T9	A0A0G2K6T9_RAT	Pcdh1	Protocadherin 1	1	AQVVVTVK	AQVVVTVK	2	AQVVVTVK2	11918	17152.1	13647.8
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	AQWAQYR	AQWAQYR	2	AQWAQYR2	26506.1	34854.6	32420.8
P70483	P70483	STRN_RAT	Strn	Striatin	1	AQWEVER	AQWEVER	2	AQWEVER2	253669	285855	327757
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	AQWTEPIVLESGEVK	AQWTEPIVLESGEVK	2	AQWTEPIVLESGEVK2	54861.1	54594.1	54721.3
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	AQWTEPIVLESGEVK	AQWTEPIVLESGEVK	3	AQWTEPIVLESGEVK3	5350.75	8512.06	13448.2
Q10758	Q10758	K2C8_RAT	Krt8	Keratin, type II cytoskeletal 8	1	AQYEEIANR	AQYEEIANR	2	AQYEEIANR2	426021	419543	419750
D3ZUV9	D3ZUV9	D3ZUV9_RAT	Cnot3	CCR4-NOT transcription complex, subunit 3	1	AQYLAAK	AQYLAAK	2	AQYLAAK2	7923.25	14574.2	9234
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	AQYPIADLVK	AQYPIADLVK	2	AQYPIADLVK2	130542	127985	158054
P70483	P70483	STRN_RAT	Strn	Striatin	1	AQYSLPGILHFLQHEWAR	AQYSLPGILHFLQHEWAR	3	AQYSLPGILHFLQHEWAR3	61020.8	58204.9	144904
P70483	P70483	STRN_RAT	Strn	Striatin	1	AQYSLPGILHFLQHEWAR	AQYSLPGILHFLQHEWAR	4	AQYSLPGILHFLQHEWAR4	57317.1	60315.7	139940
F1MAH6	F1MAH6	F1MAH6_RAT	Cdh11	Cadherin 11	1	AQYTLMAQAVDR	AQYTLMAQAVDR	2	AQYTLMAQAVDR2	15987.1	7829.55	5736.02
D3ZUB7	D3ZUB7	D3ZUB7_RAT	Anapc4	Anaphase-promoting complex subunit 4	1	AQYVAGNGLR	AQYVAGNGLR	2	AQYVAGNGLR2	18002	12462.8	13090.8
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	AQYVLISPEASSR	AQYVLISPEASSR	2	AQYVLISPEASSR2	5.65046e+06	5.9996e+06	6.29093e+06
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	AQYVLISPEASSR	AQYVLISPEASSR	3	AQYVLISPEASSR3	137621	140087	134382
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	ARAEAEQMAK	ARAEAEQMAK	2	ARAEAEQMAK2			2118.69
D3ZUY0	D3ZUY0	D3ZUY0_RAT	Rdh14	Retinol dehydrogenase 14	1	ARAEEAAGQLR	ARAEEAAGQLR	3	ARAEEAAGQLR3	10470.5	6916.59	12065.9
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	ARAEEEAYNK	ARAEEEAYNK	2	ARAEEEAYNK2			11258.9
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	ARAEEEAYNK	ARAEEEAYNK	3	ARAEEEAYNK3			8011.99
Q6PCU2	Q6PCU2	VATE1_RAT	Atp6v1e1	V-type proton ATPase subunit E 1	1	ARDDLITDLLNEAK	ARDDLITDLLNEAK	2	ARDDLITDLLNEAK2	3373.07	1806.78	3906.21
Q6PCU2	Q6PCU2	VATE1_RAT	Atp6v1e1	V-type proton ATPase subunit E 1	1	ARDDLITDLLNEAK	ARDDLITDLLNEAK	3	ARDDLITDLLNEAK3	71581.9	39168	35982.6
D3ZE26	D3ZE26	D3ZE26_RAT	Tmcc2	Transmembrane and coiled-coil domain family 2	1	ARDIQEAVESCLTR	ARDIQEAVESC(UniMod:4)LTR	3	ARDIQEAVESC(UniMod:4)LTR3	5759.03	9070.02	5976.56
P18596	P18596;Q64578	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	0	ARDIVPGDIVEVAVGDK	ARDIVPGDIVEVAVGDK	3	ARDIVPGDIVEVAVGDK3	104538	79515.5	72966.3
Q64578	Q64578	AT2A1_RAT	Atp2a1	Sarcoplasmic/endoplasmic reticulum calcium ATPase 1	1	ARDIVPGDIVEVAVGDKVPADIR	ARDIVPGDIVEVAVGDKVPADIR	3	ARDIVPGDIVEVAVGDKVPADIR3	42741.4		60335.9
Q64578	Q64578	AT2A1_RAT	Atp2a1	Sarcoplasmic/endoplasmic reticulum calcium ATPase 1	1	ARDIVPGDIVEVAVGDKVPADIR	ARDIVPGDIVEVAVGDKVPADIR	4	ARDIVPGDIVEVAVGDKVPADIR4	296346	408430	381242
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	ARDIVPGDIVEVAVGDKVPADLR	ARDIVPGDIVEVAVGDKVPADLR	3	ARDIVPGDIVEVAVGDKVPADLR3	31096.8	33831.5	23461.3
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	ARDIVPGDIVEVAVGDKVPADLR	ARDIVPGDIVEVAVGDKVPADLR	4	ARDIVPGDIVEVAVGDKVPADLR4	296346	408430	381242
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	ARDVALLYEALQR	ARDVALLYEALQR	3	ARDVALLYEALQR3	2672.02	4938.82	2518.45
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	ARDYDAMGSQTK	ARDYDAMGSQTK	2	ARDYDAMGSQTK2	1103.21	2646.85	2993.99
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	ARDYDAMGSQTK	ARDYDAMGSQTK	3	ARDYDAMGSQTK3	22070.9	42883.9	33340.9
F1M0U4	F1M0U4	F1M0U4_RAT	ENSRNOG00000066892	Ig-like domain-containing protein	1	ARDYSAVYSASVNGR	ARDYSAVYSASVNGR	2	ARDYSAVYSASVNGR2	1382.03	4521.79	3421.43
F1M0U4	F1M0U4	F1M0U4_RAT	ENSRNOG00000066892	Ig-like domain-containing protein	1	ARDYSAVYSASVNGR	ARDYSAVYSASVNGR	3	ARDYSAVYSASVNGR3	357481	542092	602021
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	AREDHLVPER	AREDHLVPER	2	AREDHLVPER2	3.64849e+06	3.74264e+06	3.48693e+06
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	AREDHLVPER	AREDHLVPER	3	AREDHLVPER3	439081	395225	533605
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	AREEFRPTIYSNVIK	AREEFRPTIYSNVIK	3	AREEFRPTIYSNVIK3		6966.82	
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	AREEFRPTIYSNVIK	AREEFRPTIYSNVIK	4	AREEFRPTIYSNVIK4	68382.4	125187	70032.6
Q63678	Q63678	ZA2G_RAT	Azgp1	Zinc-alpha-2-glycoprotein	1	AREEIFLVTLK	AREEIFLVTLK	3	AREEIFLVTLK3	22525.6	11241.3	14480
A0A0G2JSI4	A0A0G2JSI4	A0A0G2JSI4_RAT	Adgre5	Adhesion G protein-coupled receptor E5	1	AREELMCAYWK	AREELMC(UniMod:4)AYWK	2	AREELMC(UniMod:4)AYWK2	26647.7	26248.4	28256.3
A0A0G2JSI4	A0A0G2JSI4	A0A0G2JSI4_RAT	Adgre5	Adhesion G protein-coupled receptor E5	1	AREELMCAYWK	AREELMC(UniMod:4)AYWK	3	AREELMC(UniMod:4)AYWK3	267261	306004	284907
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	AREESWGPPR	AREESWGPPR	3	AREESWGPPR3	67049.1	75609.3	85329.9
Q5BJ92	Q5BJ92	PP4C_RAT	Ppp4c	Serine/threonine-protein phosphatase 4 catalytic subunit	1	AREILVEESNVQR	AREILVEESNVQR	3	AREILVEESNVQR3	2662.87	3965.3	3990.87
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	ARENIQK	ARENIQK	2	ARENIQK2			23602
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	AREQAEAEVASLNR	AREQAEAEVASLNR	2	AREQAEAEVASLNR2	9875.31	3703.19	2961.4
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	AREQAEAEVASLNR	AREQAEAEVASLNR	3	AREQAEAEVASLNR3	1.40246e+06	1.57343e+06	1.71286e+06
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	AREQAEAEVASLNRR	AREQAEAEVASLNRR	3	AREQAEAEVASLNRR3	23773.9	41379.2	40950.8
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	AREQAEAEVASLNRR	AREQAEAEVASLNRR	4	AREQAEAEVASLNRR4	117262	160793	202645
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	ARESYVETELIFALAK	ARESYVETELIFALAK	3	ARESYVETELIFALAK3	19963	8412.36	11831.7
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	AREVAFDVEIPK	AREVAFDVEIPK	2	AREVAFDVEIPK2	1.22694e+06	1.47265e+06	1.5006e+06
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	AREVAFDVEIPK	AREVAFDVEIPK	3	AREVAFDVEIPK3	84935.6	105564	8.05075e+06
P0DMW0;P0DMW1	P0DMW0;P0DMW1	HS71A_RAT;HS71B_RAT	Hspa1a;Hspa1b	Heat shock 70 kDa protein 1A	0	ARFEELCSDLFR	ARFEELC(UniMod:4)SDLFR	3	ARFEELC(UniMod:4)SDLFR3	22386.4	6724.29	
P14659	P14659;A0A8I6AQL9;P63018;M0RCB1	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	0	ARFEELNADLFR	ARFEELNADLFR	2	ARFEELNADLFR2	58228.3	60519.4	63145.8
P14659	P14659;A0A8I6AQL9;P63018;M0RCB1	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	0	ARFEELNADLFR	ARFEELNADLFR	3	ARFEELNADLFR3	1.06808e+06	991610	1.01232e+06
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	ARGDESGPLAYHITLVELLAACTEGK	ARGDESGPLAYHITLVELLAAC(UniMod:4)TEGK	4	ARGDESGPLAYHITLVELLAAC(UniMod:4)TEGK4	7302.59	9398.53	11577.7
D4A565	D4A565	D4A565_RAT	Ndufb5	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial	1	ARGDGPWYQYPTPEK	ARGDGPWYQYPTPEK	3	ARGDGPWYQYPTPEK3	18009.8	23164.5	37115.8
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	ARGEELDEDLFLQLTGGHEAF	ARGEELDEDLFLQLTGGHEAF	3	ARGEELDEDLFLQLTGGHEAF3	293764	322715	298763
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	ARGGNIGDGGGAADR	ARGGNIGDGGGAADR	3	ARGGNIGDGGGAADR3			13243.8
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	ARGGSLAQPADR	ARGGSLAQPADR	3	ARGGSLAQPADR3	9394.27	25164	26808.3
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	ARGPGLEK	ARGPGLEK	2	ARGPGLEK2	18848.6		6015.94
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	ARGQGASPVAMQK	ARGQGASPVAMQK	2	ARGQGASPVAMQK2	1377.45		2451.69
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	ARGQGASPVAMQK	ARGQGASPVAMQK	3	ARGQGASPVAMQK3	7395.72	14858	14346.2
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	ARGSIFNSGSHVLPLEQGK	ARGSIFNSGSHVLPLEQGK	3	ARGSIFNSGSHVLPLEQGK3	5212.11	12593.4	4951.67
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	ARGSIFNSGSHVLPLEQGK	ARGSIFNSGSHVLPLEQGK	4	ARGSIFNSGSHVLPLEQGK4	19740.8	33352.5	34763.9
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	ARHEVLLISAEQDK	ARHEVLLISAEQDK	3	ARHEVLLISAEQDK3	4311.82	3937.57	
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	ARHEVLLISAEQDKR	ARHEVLLISAEQDKR	4	ARHEVLLISAEQDKR4	5340.47	5642.24	6132.82
P97633	P97633	KC1A_RAT	Csnk1a1	Casein kinase I isoform alpha	1	ARHPQLLYESK	ARHPQLLYESK	3	ARHPQLLYESK3	5193.7		
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	ARIEGTTAASTYVFVR	ARIEGTTAASTYVFVR	3	ARIEGTTAASTYVFVR3	5421.86	11105.4	8551.93
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	ARLAKEVQAAQAR	ARLAKEVQAAQAR	3	ARLAKEVQAAQAR3	4373.41	2498.99	5399.08
P49651	P49651	P2RY1_RAT	P2ry1	P2Y purinoceptor 1	1	ARLDFQTPEMCDFNDR	ARLDFQTPEMC(UniMod:4)DFNDR	3	ARLDFQTPEMC(UniMod:4)DFNDR3	4055.97	6843.47	6085.93
B2GV54	B2GV54	NCEH1_RAT	Nceh1	Neutral cholesterol ester hydrolase 1	1	ARLDWTSLLPSSIK	ARLDWTSLLPSSIK	3	ARLDWTSLLPSSIK3	11584	22263.2	12293.5
G3V6L9	G3V6L9	G3V6L9_RAT	Fkbp3	peptidylprolyl isomerase	1	ARLEIEPEWAYGK	ARLEIEPEWAYGK	3	ARLEIEPEWAYGK3	11533.7	11033.6	9190.11
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	ARLEVENQAK	ARLEVENQAK	3	ARLEVENQAK3	26188.5	36117.7	24406
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	ARLPPQEWEK	ARLPPQEWEK	3	ARLPPQEWEK3	11500.9	7276.06	10727.2
P58751	P58751	RELN_RAT	Reln	Reelin	1	ARNEGLVVQYSNDNGILWHLLR	ARNEGLVVQYSNDNGILWHLLR	4	ARNEGLVVQYSNDNGILWHLLR4	5706.29	3806.86	4758.35
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	ARPAKVDAGQK	ARPAKVDAGQK	3	ARPAKVDAGQK3			6051.24
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	ARPDAEK	ARPDAEK	2	ARPDAEK2			5807.15
A0A0G2K7P4	A0A0G2K7P4	A0A0G2K7P4_RAT	RGD1560212	N-terminal amino-acid N(alpha)-acetyltransferase NatA	1	ARPDDLMNMQHCNLLCLPENYQMK	ARPDDLMNMQHC(UniMod:4)NLLC(UniMod:4)LPENYQMK	4	ARPDDLMNMQHC(UniMod:4)NLLC(UniMod:4)LPENYQMK4		5636.6	4206.61
Q62921	Q62921	HOIL1_RAT	Rbck1	RanBP-type and C3HC4-type zinc finger-containing protein 1	1	ARPEAYQIPASYQPDEEER	ARPEAYQIPASYQPDEEER	3	ARPEAYQIPASYQPDEEER3	8687.06	5130.53	6647.17
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	ARPEDVVNLDLK	ARPEDVVNLDLK	2	ARPEDVVNLDLK2	100890	88238.8	87215.3
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	ARPEDVVNLDLK	ARPEDVVNLDLK	3	ARPEDVVNLDLK3	920260	890542	947591
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	ARPEFMLPVHFYGR	ARPEFMLPVHFYGR	3	ARPEFMLPVHFYGR3	30237.3	28123	37370
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	ARPEFMLPVHFYGR	ARPEFMLPVHFYGR	4	ARPEFMLPVHFYGR4	135686	124274	143720
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	ARPEFTLPVHFYGR	ARPEFTLPVHFYGR	3	ARPEFTLPVHFYGR3	10299.8	10198.7	12538.5
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	ARPEFTLPVHFYGR	ARPEFTLPVHFYGR	4	ARPEFTLPVHFYGR4	44356.6	60954.4	41729
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	ARPEPCHFK	ARPEPC(UniMod:4)HFK	2	ARPEPC(UniMod:4)HFK2	13599.1		11655.2
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	ARPEPCHFK	ARPEPC(UniMod:4)HFK	3	ARPEPC(UniMod:4)HFK3	125519		120439
P53534	P53534	PYGB_RAT	Pygb	Glycogen phosphorylase, brain form (Fragment)	1	ARPEYMLPVHFYGR	ARPEYMLPVHFYGR	3	ARPEYMLPVHFYGR3	4770.96	8180.21	9019.17
P53534	P53534	PYGB_RAT	Pygb	Glycogen phosphorylase, brain form (Fragment)	1	ARPEYMLPVHFYGR	ARPEYMLPVHFYGR	4	ARPEYMLPVHFYGR4	22421.9	16762	18111.4
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	ARPFPDGLAEDIDK	ARPFPDGLAEDIDK	3	ARPFPDGLAEDIDK3	49546.6	23922.6	14653.6
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	ARPFPDGLAEDIDKGEVSAR	ARPFPDGLAEDIDKGEVSAR	4	ARPFPDGLAEDIDKGEVSAR4	47257.2		36309.2
Q6VBQ5	Q6VBQ5	MYADM_RAT	Myadm	Myeloid-associated differentiation marker	1	ARPGEITGYMATVPGLLK	ARPGEITGYMATVPGLLK	3	ARPGEITGYMATVPGLLK3	29470.9	19466.1	24067.5
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	ARPGETPEAPPR	ARPGETPEAPPR	3	ARPGETPEAPPR3	87564.3	81641.1	70156.1
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	ARPHLCSSGPCR	ARPHLC(UniMod:4)SSGPC(UniMod:4)R	3	ARPHLC(UniMod:4)SSGPC(UniMod:4)R3			6665.58
P05942	P05942	S10A4_RAT	S100a4	Protein S100-A4	1	ARPLEEALDVIVSTFHK	ARPLEEALDVIVSTFHK	3	ARPLEEALDVIVSTFHK3		8551.84	1416.04
P05942	P05942	S10A4_RAT	S100a4	Protein S100-A4	1	ARPLEEALDVIVSTFHK	ARPLEEALDVIVSTFHK	4	ARPLEEALDVIVSTFHK4	4130.04	1920.66	2334.58
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	ARPLGQTLPLR	ARPLGQTLPLR	2	ARPLGQTLPLR2	6209.2	5333.24	7523.29
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	ARPLGQTLPLR	ARPLGQTLPLR	3	ARPLGQTLPLR3	79394.6	91660.6	104385
Q80WD1	Q80WD1	R4RL2_RAT	Rtn4rl2	Reticulon-4 receptor-like 2	1	ARPLWAWFQR	ARPLWAWFQR	3	ARPLWAWFQR3	19787.4	15280.7	12509.8
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	ARPNCGGNLLGVR	ARPNC(UniMod:4)GGNLLGVR	3	ARPNC(UniMod:4)GGNLLGVR3		8817.11	12702.9
Q498S8	Q498S8	FZD8_RAT	Fzd8	Frizzled-8	1	ARPPGGGAAPCEPGCQCR	ARPPGGGAAPC(UniMod:4)EPGC(UniMod:4)QC(UniMod:4)R	3	ARPPGGGAAPC(UniMod:4)EPGC(UniMod:4)QC(UniMod:4)R3	8422.25	6102.63	3977.8
A0A8I6A456	A0A8I6A456	A0A8I6A456_RAT	ENSRNOG00000064986	Kinesin motor domain-containing protein	1	ARPSQLPEQSSSAQQNAR	ARPSQLPEQSSSAQQNAR	3	ARPSQLPEQSSSAQQNAR3	161500	142409	138475
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	ARPSQLPEQSSSAQQNGSVSDISPVQAAK	ARPSQLPEQSSSAQQNGSVSDISPVQAAK	4	ARPSQLPEQSSSAQQNGSVSDISPVQAAK4	8973.12	12363.8	10925.6
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	ARPVVTVNAGLEVYPSILNQDNK	ARPVVTVNAGLEVYPSILNQDNK	3	ARPVVTVNAGLEVYPSILNQDNK3	329084	273223	310125
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ARQEQLELTLGR	ARQEQLELTLGR	3	ARQEQLELTLGR3	9107.95	13779.8	9733.23
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	ARTPQVYTIPPPR	ARTPQVYTIPPPR	3	ARTPQVYTIPPPR3	77253.2	100457	133258
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	ARTPQVYTIPPPREQMSK	ARTPQVYTIPPPREQMSK	4	ARTPQVYTIPPPREQMSK4	79495.8	124947	108041
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	ARVEENFLK	ARVEENFLK	2	ARVEENFLK2	10422.6	6969.6	5378.33
P55797	P55797	APOC4_RAT	Apoc4	Apolipoprotein C-IV	1	ARVMEMVEPLVTR	ARVMEMVEPLVTR	3	ARVMEMVEPLVTR3	6102.08	13384.8	9045.74
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	ARYEAANWK	ARYEAANWK	2	ARYEAANWK2	43566.9	56840.5	54303.8
D3ZV40	D3ZV40	D3ZV40_RAT	Unk	Unk zinc finger	1	ASAAGAECELAR	ASAAGAEC(UniMod:4)ELAR	2	ASAAGAEC(UniMod:4)ELAR2	7293.85	9307.03	4314.09
A0A8I5ZNG4	A0A8I5ZNG4	A0A8I5ZNG4_RAT	Rictor	RPTOR independent companion of MTOR, complex 2	1	ASAALNCLK	ASAALNC(UniMod:4)LK	2	ASAALNC(UniMod:4)LK2	5557.55	3198.71	
B5DEH4	B5DEH4	B5DEH4_RAT	Uap1l1	UDP-N-acetylglucosamine pyrophosphorylase 1 like 1	1	ASAASALASGPLPDLAAR	ASAASALASGPLPDLAAR	2	ASAASALASGPLPDLAAR2	2334.64	5464.01	7612.73
G3V6P8	G3V6P8	G3V6P8_RAT	Gng12	Guanine nucleotide-binding protein subunit gamma	1	ASADLMSYCEEHAR	ASADLMSYC(UniMod:4)EEHAR	2	ASADLMSYC(UniMod:4)EEHAR2	7662.45	4737.85	3128.14
G3V6P8	G3V6P8	G3V6P8_RAT	Gng12	Guanine nucleotide-binding protein subunit gamma	1	ASADLMSYCEEHAR	ASADLMSYC(UniMod:4)EEHAR	3	ASADLMSYC(UniMod:4)EEHAR3	126200	151479	135014
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	ASAEGREEEEAAAETEEK	ASAEGREEEEAAAETEEK	3	ASAEGREEEEAAAETEEK3	23822.4	20879.5	17090.8
P00507	P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	1	ASAELALGENSEVLK	ASAELALGENSEVLK	2	ASAELALGENSEVLK2	82635.8	86862.8	88764.4
P00507	P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	1	ASAELALGENSEVLK	ASAELALGENSEVLK	3	ASAELALGENSEVLK3	1614.67	3774.04	4710.9
P17425	P17425	HMCS1_RAT	Hmgcs1	Hydroxymethylglutaryl-CoA synthase, cytoplasmic	1	ASAELFNQK	ASAELFNQK	2	ASAELFNQK2	13414.9	5114.52	3460.75
A0A8J8YFS5	A0A8I6ALV4;A0A8J8YFS5	A0A8J8YFS5_RAT	Hars1	Histidine--tRNA ligase, cytoplasmic	0	ASAEQIEEEVTK	ASAEQIEEEVTK	2	ASAEQIEEEVTK2	17625.6	10668.2	18931.2
Q01205	Q01205	ODO2_RAT	Dlst	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial	1	ASAFALQEQPVVNAVIDDATK	ASAFALQEQPVVNAVIDDATK	3	ASAFALQEQPVVNAVIDDATK3	29323	40271.7	51735.7
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	ASAFCLSGTTGLGLSSTISHK	ASAFC(UniMod:4)LSGTTGLGLSSTISHK	3	ASAFC(UniMod:4)LSGTTGLGLSSTISHK3	2.00629e+06	366322	1.58065e+06
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	ASAFNSWFENAEEDLTDPVR	ASAFNSWFENAEEDLTDPVR	3	ASAFNSWFENAEEDLTDPVR3	77299.9	116156	67964.8
B1WBT4	B1WBT4	B1WBT4_RAT	Srpk2	SRSF protein kinase 2	1	ASAGECLR	ASAGEC(UniMod:4)LR	2	ASAGEC(UniMod:4)LR2		19012.3	23634.5
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	ASAGLLGAHASAITAYALTLTK	ASAGLLGAHASAITAYALTLTK	3	ASAGLLGAHASAITAYALTLTK3	22581.3	23744.8	10551.1
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	ASAGLLGAHASAITAYALTLTK	ASAGLLGAHASAITAYALTLTK	4	ASAGLLGAHASAITAYALTLTK4	850468	889404	1.05746e+06
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	ASAGLLGAHASAITAYALTLTKASEDLR	ASAGLLGAHASAITAYALTLTKASEDLR	4	ASAGLLGAHASAITAYALTLTKASEDLR4	9499.37	15389	2694.75
D4A9Y0	D4A9Y0	D4A9Y0_RAT	Sdf2l1	Stromal cell-derived factor 2-like 1	1	ASAGLVTCGSVLK	ASAGLVTC(UniMod:4)GSVLK	2	ASAGLVTC(UniMod:4)GSVLK2	119574	143744	102751
D3ZD73	D3ZD73;A0A8I6A3H5;A0A8I5Y7L2	D3ZD73_RAT	Ddx6	DEAD-box helicase 6	0	ASAGPGGGGPQTQTQMNQLK	ASAGPGGGGPQTQTQMNQLK	2	ASAGPGGGGPQTQTQMNQLK2	2552.67	4562.72	
D3ZD73	D3ZD73;A0A8I6A3H5;A0A8I5Y7L2	D3ZD73_RAT	Ddx6	DEAD-box helicase 6	0	ASAGPGGGGPQTQTQMNQLK	ASAGPGGGGPQTQTQMNQLK	3	ASAGPGGGGPQTQTQMNQLK3	4855.64	4815.69	4979.88
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ASAGPQPLLVQSCK	ASAGPQPLLVQSC(UniMod:4)K	2	ASAGPQPLLVQSC(UniMod:4)K2	841688	639598	595324
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ASAGPQPLLVQSCK	ASAGPQPLLVQSC(UniMod:4)K	3	ASAGPQPLLVQSC(UniMod:4)K3	34060.5	26274.1	20741.5
P28064	P28064	PSB8_RAT	Psmb8	Proteasome subunit beta type-8	1	ASAGSYIATIR	ASAGSYIATIR	2	ASAGSYIATIR2	1.12718e+06	1.02887e+06	1.1866e+06
P08461	A0A8I6B5J2;P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	0	ASALACLK	ASALAC(UniMod:4)LK	2	ASALAC(UniMod:4)LK2	59509.4	49744.7	38264.4
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	ASALGSDGVR	ASALGSDGVR	2	ASALGSDGVR2	33362.7	28165.5	28099.5
Q9JMB3	Q9JMB3	Q9JMB3_RAT	Epb41l3	Erythrocyte membrane protein band 4.1-like 3	1	ASALIDRPAPYFER	ASALIDRPAPYFER	3	ASALIDRPAPYFER3	24073	29953.2	34154.7
A0A8I6AHQ9	A0A8I6AHQ9	A0A8I6AHQ9_RAT	Xpot	Exportin-T	1	ASALQDMMR	ASALQDMMR	2	ASALQDMMR2	17280.9	22141.2	12627.8
G3V996	G3V996	G3V996_RAT	Letmd1	LETM1 domain containing 1	1	ASALVSNEK	ASALVSNEK	2	ASALVSNEK2	11338.7	5373.75	11125.8
Q68FS4	A0A8I6B0E2;Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	0	ASANMDLMR	ASANMDLMR	2	ASANMDLMR2	28675.1	31056.2	39189.4
D3ZUL5	D3ZUL5	D3ZUL5_RAT	Myct1	Myc target 1	1	ASAPISQWSPTR	ASAPISQWSPTR	2	ASAPISQWSPTR2	888127	865332	911490
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	ASAPVPVPSGPSEELLR	ASAPVPVPSGPSEELLR	2	ASAPVPVPSGPSEELLR2	553366	553888	569424
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	ASAPVPVPSGPSEELLR	ASAPVPVPSGPSEELLR	3	ASAPVPVPSGPSEELLR3	46150.5	53814.7	61597.3
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	ASAQELLGDPFLQPGK	ASAQELLGDPFLQPGK	2	ASAQELLGDPFLQPGK2	9960.31	8276.21	10790.4
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	ASAQELLGDPFLQPGK	ASAQELLGDPFLQPGK	3	ASAQELLGDPFLQPGK3	3536.12	6814.2	
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	ASAQELLGDPFLQPGKR	ASAQELLGDPFLQPGKR	3	ASAQELLGDPFLQPGKR3	9729.52	16913	14807.2
D3ZW92	D3ZW92	D3ZW92_RAT	Fam78a	Family with sequence similarity 78, member A	1	ASAQVVMPPIPK	ASAQVVMPPIPK	2	ASAQVVMPPIPK2	13740.8	9441.7	11196.1
A0A8I5ZJ62	A0A8I5ZJ62	A0A8I5ZJ62_RAT	Glipr2	GLI pathogenesis-related 2	1	ASASDGSSFVVAR	ASASDGSSFVVAR	2	ASASDGSSFVVAR2	94688.8	85741.4	75996.2
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	ASASLKPPAADLFTGVLPNNYNPPK	ASASLKPPAADLFTGVLPNNYNPPK	3	ASASLKPPAADLFTGVLPNNYNPPK3	22238.5	21464.6	21346.3
Q66HG9	Q66HG9	MAVS_RAT	Mavs	Mitochondrial antiviral-signaling protein	1	ASASTMPPER	ASASTMPPER	2	ASASTMPPER2	42803.2	28829.6	25888.8
P07872	P07872	ACOX1_RAT	Acox1	Peroxisomal acyl-coenzyme A oxidase 1	1	ASATFNPELITHILDGSPENTR	ASATFNPELITHILDGSPENTR	3	ASATFNPELITHILDGSPENTR3	25955.4	19796.3	
P07872	P07872	ACOX1_RAT	Acox1	Peroxisomal acyl-coenzyme A oxidase 1	1	ASATFNPELITHILDGSPENTRR	ASATFNPELITHILDGSPENTRR	4	ASATFNPELITHILDGSPENTRR4	5871.48	11236	8233.94
A0A8I5ZLY7	A0A8I5ZLY7	A0A8I5ZLY7_RAT	Tapbp	TAP binding protein	1	ASATSLTVPK	ASATSLTVPK	2	ASATSLTVPK2	102278	99238.1	121328
A0A8I5ZLY7	A0A8I5ZLY7	A0A8I5ZLY7_RAT	Tapbp	TAP binding protein	1	ASATSLTVPKDEK	ASATSLTVPKDEK	2	ASATSLTVPKDEK2	15669.6	15379.8	8862.39
A0A8I5ZLY7	A0A8I5ZLY7	A0A8I5ZLY7_RAT	Tapbp	TAP binding protein	1	ASATSLTVPKDEK	ASATSLTVPKDEK	3	ASATSLTVPKDEK3	92990.3	105066	96444.8
Q5M890	Q5M890	Q5M890_RAT	Apon	Apolipoprotein N	1	ASAVNATQQCTMESWEHMNEVGK	ASAVNATQQC(UniMod:4)TMESWEHMNEVGK	3	ASAVNATQQC(UniMod:4)TMESWEHMNEVGK3	9802.5	20470.7	21311.6
Q5M890	Q5M890	Q5M890_RAT	Apon	Apolipoprotein N	1	ASAVNATQQCTMESWEHMNEVGKR	ASAVNATQQC(UniMod:4)TMESWEHMNEVGKR	4	ASAVNATQQC(UniMod:4)TMESWEHMNEVGKR4		2793.39	3547.59
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	ASAVNMEK	ASAVNMEK	2	ASAVNMEK2	23589.1	26443.5	31245
B2GV97	B2GV97	B2GV97_RAT	Sepsecs	O-phosphoseryl-tRNA(Sec) selenium transferase	1	ASAVSGADGNK	ASAVSGADGNK	2	ASAVSGADGNK2			8964.25
D3ZFS7	D3ZFS7	D3ZFS7_RAT	Lyplal1	palmitoyl-protein hydrolase	1	ASAVYQDLQQGGR	ASAVYQDLQQGGR	2	ASAVYQDLQQGGR2	9032.35	8438.21	7435.31
D3ZFS7	D3ZFS7	D3ZFS7_RAT	Lyplal1	palmitoyl-protein hydrolase	1	ASAVYQDLQQGGR	ASAVYQDLQQGGR	3	ASAVYQDLQQGGR3	9402.03		
Q5FVI6	Q5FVI6	VATC1_RAT	Atp6v1c1	V-type proton ATPase subunit C 1	1	ASAYNNLK	ASAYNNLK	2	ASAYNNLK2	16724	12155.1	17982.5
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	ASCCCSLGK	ASC(UniMod:4)C(UniMod:4)C(UniMod:4)SLGK	2	ASC(UniMod:4)C(UniMod:4)C(UniMod:4)SLGK2	36823.9	44070.4	
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	ASCDAQTYGIGLK	ASC(UniMod:4)DAQTYGIGLK	2	ASC(UniMod:4)DAQTYGIGLK2	22648	15894	22966.4
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	ASCDSGPMVASQQSPLLPLIPPAR	ASC(UniMod:4)DSGPMVASQQSPLLPLIPPAR	3	ASC(UniMod:4)DSGPMVASQQSPLLPLIPPAR3	28841.3	23081.9	31384.2
P24062	P24062	IGF1R_RAT	Igf1r	Insulin-like growth factor 1 receptor	1	ASCESDVLR	ASC(UniMod:4)ESDVLR	2	ASC(UniMod:4)ESDVLR2	3434.3	7968.75	7136.29
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	ASCILQLVK	ASC(UniMod:4)ILQLVK	2	ASC(UniMod:4)ILQLVK2	99057.4	112166	96796.8
D4AE80	D4AE80	D4AE80_RAT	Dcp1a	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	ASCPSPLTIGAENQR	ASC(UniMod:4)PSPLTIGAENQR	2	ASC(UniMod:4)PSPLTIGAENQR2	2095.3	4130.49	5489.57
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	ASCYNSPLGCCSDGK	ASC(UniMod:4)YNSPLGC(UniMod:4)C(UniMod:4)SDGK	2	ASC(UniMod:4)YNSPLGC(UniMod:4)C(UniMod:4)SDGK2	6097.34	13115.6	7766.34
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	ASDAEIMSSQSALALDER	ASDAEIMSSQSALALDER	2	ASDAEIMSSQSALALDER2	3865.51	2401.74	
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	ASDAGVYR	ASDAGVYR	2	ASDAGVYR2		52186.7	55047.7
Q63488	Q63488	S20A2_RAT	Slc20a2	Sodium-dependent phosphate transporter 2	1	ASDDSAVPLTSLAGEAAGASEGTSAGNHPR	ASDDSAVPLTSLAGEAAGASEGTSAGNHPR	3	ASDDSAVPLTSLAGEAAGASEGTSAGNHPR3	27172.4	26766.3	23787
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	ASDDWWEGR	ASDDWWEGR	2	ASDDWWEGR2	8952.02		11624.5
A0A8I5ZK60	A0A8I5ZK60	A0A8I5ZK60_RAT	Ccer2	Coiled-coil glutamate-rich protein 2	1	ASDEETAQFQAEEK	ASDEETAQFQAEEK	2	ASDEETAQFQAEEK2	3309.81	2481.71	1680.25
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	ASDEQIPDPWSQYLQK	ASDEQIPDPWSQYLQK	2	ASDEQIPDPWSQYLQK2	32183.9	34155	29259.1
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	ASDEQIPDPWSQYLQK	ASDEQIPDPWSQYLQK	3	ASDEQIPDPWSQYLQK3		87112.2	82487.9
Q63488	Q63488	S20A2_RAT	Slc20a2	Sodium-dependent phosphate transporter 2	1	ASDESLR	ASDESLR	2	ASDESLR2			413385
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	ASDEVTR	ASDEVTR	1	ASDEVTR1			13403.3
D3ZTJ0	D3ZTJ0	D3ZTJ0_RAT	Rp2	Protein XRP2	1	ASDFLLLLNK	ASDFLLLLNK	2	ASDFLLLLNK2	17970.8	17426	32723.8
A0A0G2K8N6	A0A0G2K8N6	A0A0G2K8N6_RAT	Ankmy2	Ankyrin repeat and MYND domain containing 2	1	ASDGFPVYQEK	ASDGFPVYQEK	2	ASDGFPVYQEK2	25248.5	32378	32904.2
D3ZY16	D3ZY16	D3ZY16_RAT	Trim65	Tripartite motif-containing 65	1	ASDHSITLGVTYPELPR	ASDHSITLGVTYPELPR	3	ASDHSITLGVTYPELPR3		16130	8668.74
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	ASDLDGDLTATR	ASDLDGDLTATR	2	ASDLDGDLTATR2	84015.1	102629	96310.5
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	ASDLENWIK	ASDLENWIK	2	ASDLENWIK2	11204.9	4184.44	10046.5
Q5M7W7	Q5M7W7	SYPM_RAT	Pars2	Probable proline--tRNA ligase, mitochondrial	1	ASDLTCK	ASDLTC(UniMod:4)K	2	ASDLTC(UniMod:4)K2	6291.16		
A0A0G2K543	A0A0G2K543	A0A0G2K543_RAT	C2cd5	C2 calcium-dependent domain containing 5	1	ASDLTDAFVEVK	ASDLTDAFVEVK	2	ASDLTDAFVEVK2	11496.3	7808.55	9663.67
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ASDNLVK	ASDNLVK	1	ASDNLVK1	18333.7	17853.2	22158.8
A0A8I5ZQH9	A0A8I5ZQH9	A0A8I5ZQH9_RAT	Dcaf6	DDB1 and CUL4 associated factor 6	1	ASDNPELPSQTEAIAPSAHEDPSAR	ASDNPELPSQTEAIAPSAHEDPSAR	3	ASDNPELPSQTEAIAPSAHEDPSAR3	6899.43	7316.48	10048
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	ASDPDEAK	ASDPDEAK	2	ASDPDEAK2			37235.9
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	ASDPGLPAMYLR	ASDPGLPAMYLR	2	ASDPGLPAMYLR2	9625.41	4982.02	
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	ASDPGLPAMYLRPGAGISWGSR	ASDPGLPAMYLRPGAGISWGSR	3	ASDPGLPAMYLRPGAGISWGSR3	31686.9	29171.6	18160.3
D3ZXB1	D3ZXB1	D3ZXB1_RAT	Map4k2	Mitogen-activated protein kinase kinase kinase kinase 2	1	ASDPHLGTLSPEDSELETHDMFPDTIHSR	ASDPHLGTLSPEDSELETHDMFPDTIHSR	4	ASDPHLGTLSPEDSELETHDMFPDTIHSR4	1555.47		
P51111	P51111	HD_RAT	Htt	Huntingtin	1	ASDPSPATPDSESVIVAMER	ASDPSPATPDSESVIVAMER	3	ASDPSPATPDSESVIVAMER3	11820.3	17977.6	17041.2
A0A8I6GJC5	A0A8I6GJC5	A0A8I6GJC5_RAT	Reps1	RALBP1 associated Eps domain containing 1	1	ASDPSSSLR	ASDPSSSLR	2	ASDPSSSLR2	4587.99		11703
G3V7P1	G3V7P1	STX12_RAT	Stx12	Syntaxin-12	1	ASDQLQR	ASDQLQR	2	ASDQLQR2	30641.5		41905.8
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	ASDSPIDLFCGDFVGDISEAVIQK	ASDSPIDLFC(UniMod:4)GDFVGDISEAVIQK	3	ASDSPIDLFC(UniMod:4)GDFVGDISEAVIQK3		1419.57	3027.02
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	ASDSSINWNNLK	ASDSSINWNNLK	2	ASDSSINWNNLK2	26550.7	20658.3	21502.3
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	ASDSSINWNNLK	ASDSSINWNNLK	3	ASDSSINWNNLK3	7314.49	7381.14	8194.97
Q3T1I9	Q3T1I9	RPAP1_RAT	Rpap1	RNA polymerase II-associated protein 1	1	ASDTPSGLPAADTVGITMR	ASDTPSGLPAADTVGITMR	2	ASDTPSGLPAADTVGITMR2	5416.77	2075.37	
P12928	P12928	KPYR_RAT	Pklr	Pyruvate kinase PKLR	1	ASDVLAVR	ASDVLAVR	2	ASDVLAVR2	11229.8	7580.42	10971.9
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	ASDVSTLCPEVCMAPEER	ASDVSTLC(UniMod:4)PEVC(UniMod:4)MAPEER	3	ASDVSTLC(UniMod:4)PEVC(UniMod:4)MAPEER3	17584.9	19736	24327.7
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	ASDWGLPYR	ASDWGLPYR	2	ASDWGLPYR2	62233.7	67059.2	58390.7
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	ASDWGLPYRR	ASDWGLPYRR	3	ASDWGLPYRR3	13905.7	19893	15378.2
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	ASDYGMK	ASDYGMK	1	ASDYGMK1	10498	8446.05	14697.7
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	ASDYGMK	ASDYGMK	2	ASDYGMK2	284794	288232	319990
A0A8I5YBR2	A0A8I5YBR2	A0A8I5YBR2_RAT	Cops6	COP9 signalosome complex subunit 6	1	ASEAGEVPFNHEILR	ASEAGEVPFNHEILR	2	ASEAGEVPFNHEILR2	18570	13776.3	14697.3
A0A8I5YBR2	A0A8I5YBR2	A0A8I5YBR2_RAT	Cops6	COP9 signalosome complex subunit 6	1	ASEAGEVPFNHEILR	ASEAGEVPFNHEILR	3	ASEAGEVPFNHEILR3	158198	146726	159896
P07872	P07872	ACOX1_RAT	Acox1	Peroxisomal acyl-coenzyme A oxidase 1	1	ASEAHCHYVVVK	ASEAHC(UniMod:4)HYVVVK	3	ASEAHC(UniMod:4)HYVVVK3	12455.5	9960.85	
F1LYX9	F1LYX9	F1LYX9_RAT	Dsg2	Desmoglein 2	1	ASEAMDR	ASEAMDR	2	ASEAMDR2			10041.5
A0A096MJX4	A0A096MJX4	A0A096MJX4_RAT	Fsip2	Fibrous sheath-interacting protein 2	1	ASEAVPSADK	ASEAVPSADK	2	ASEAVPSADK2	29202.1	15383	23096.7
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ASEAVYDYVK	ASEAVYDYVK	2	ASEAVYDYVK2	596783	718833	640830
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ASEAVYDYVKK	ASEAVYDYVKK	2	ASEAVYDYVKK2	14319.9	28498.8	21475.8
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ASEAVYDYVKK	ASEAVYDYVKK	3	ASEAVYDYVKK3	34251.6	59917.9	79127.4
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	ASEDFVDPWTVR	ASEDFVDPWTVR	2	ASEDFVDPWTVR2	45195.5	36477.6	40142.6
A0A8I6AHV2;F1LZK3	F1LZK3;A0A8I6AHV2	A0A8I6AHV2_RAT;F1LZK3_RAT	ENSRNOG00000062608;ENSRNOG00000063419	Ig-like domain-containing protein	0	ASEDIYNGLAWYQQK	ASEDIYNGLAWYQQK	2	ASEDIYNGLAWYQQK2	15947.6	6639.89	10017.9
A0A8I6AHV2;F1LZK3	F1LZK3;A0A8I6AHV2	A0A8I6AHV2_RAT;F1LZK3_RAT	ENSRNOG00000062608;ENSRNOG00000063419	Ig-like domain-containing protein	0	ASEDIYNGLAWYQQKPGK	ASEDIYNGLAWYQQKPGK	3	ASEDIYNGLAWYQQKPGK3	181497	155038	152318
A0A8I6AQ74	A0A8I6AQ74	A0A8I6AQ74_RAT	ENSRNOG00000064086	Ig-like domain-containing protein	1	ASEDIYSNLAWYQQK	ASEDIYSNLAWYQQK	3	ASEDIYSNLAWYQQK3	31350.6	33146	31631.9
F1M5M9	F1M287;F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	0	ASEDWWEGR	ASEDWWEGR	2	ASEDWWEGR2	30597.9	17085.5	21970.8
Q62881	Q62881	NOL3_RAT	Nol3	Nucleolar protein 3	1	ASEEEEIGGPEDSEAVQPR	ASEEEEIGGPEDSEAVQPR	3	ASEEEEIGGPEDSEAVQPR3	2510.82	1518.49	
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	ASEGAAYDDHSSPAEK	ASEGAAYDDHSSPAEK	2	ASEGAAYDDHSSPAEK2	7534.99	2505.75	
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	ASEGAAYDDHSSPAEK	ASEGAAYDDHSSPAEK	3	ASEGAAYDDHSSPAEK3	95685.3	73095.8	86735.4
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	ASEGAAYDDHSSPAEKDDDK	ASEGAAYDDHSSPAEKDDDK	3	ASEGAAYDDHSSPAEKDDDK3	51838.8		44480.2
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	ASEGAAYDDHSSPAEKDDDK	ASEGAAYDDHSSPAEKDDDK	4	ASEGAAYDDHSSPAEKDDDK4	13955.7		11448.1
D3ZCJ3	D3ZCJ3	D3ZCJ3_RAT	Mfsd6	Major facilitator superfamily domain containing 6	1	ASEIQPLQGIHENR	ASEIQPLQGIHENR	2	ASEIQPLQGIHENR2	19050.8	12521.4	12777.7
D3ZCJ3	D3ZCJ3	D3ZCJ3_RAT	Mfsd6	Major facilitator superfamily domain containing 6	1	ASEIQPLQGIHENR	ASEIQPLQGIHENR	3	ASEIQPLQGIHENR3	69426.1	70820.6	75561.1
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	ASEIVCLAVSPLDTHGFEHTFEVYTEGER	ASEIVC(UniMod:4)LAVSPLDTHGFEHTFEVYTEGER	4	ASEIVC(UniMod:4)LAVSPLDTHGFEHTFEVYTEGER4	13547.1	12501.9	8429.04
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	ASELATLIQTK	ASELATLIQTK	2	ASELATLIQTK2	78299.4	59296.1	56181.7
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	ASELAVSEVAGLLQADLQNGLNK	ASELAVSEVAGLLQADLQNGLNK	3	ASELAVSEVAGLLQADLQNGLNK3	5916.73		5823.3
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	ASELDLEK	ASELDLEK	2	ASELDLEK2	38898.9	37196.4	35698.6
Q62848	Q62848	ARFG1_RAT	Arfgap1	ADP-ribosylation factor GTPase-activating protein 1	1	ASELGHSLNENVLKPAQEK	ASELGHSLNENVLKPAQEK	3	ASELGHSLNENVLKPAQEK3	22981.6	14548.8	16597.7
Q62848	Q62848	ARFG1_RAT	Arfgap1	ADP-ribosylation factor GTPase-activating protein 1	1	ASELGHSLNENVLKPAQEK	ASELGHSLNENVLKPAQEK	4	ASELGHSLNENVLKPAQEK4	57528.2	41289	46773.2
D4A1A5	D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	ASELLSQDGR	ASELLSQDGR	2	ASELLSQDGR2	47957.8	58581.5	56377.8
D3ZL50	D3ZL50	D3ZL50_RAT	Skic3	Tetratricopeptide repeat domain 37	1	ASELSPDSTYSVFK	ASELSPDSTYSVFK	2	ASELSPDSTYSVFK2	5349.04		3366.77
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	ASENAIVWK	ASENAIVWK	2	ASENAIVWK2	48368.3	36623.6	33292.3
F1LWW1	F1LWW1	F1LWW1_RAT	AABR07061136.1	Ig-like domain-containing protein	1	ASENINNYLSWYQK	ASENINNYLSWYQK	2	ASENINNYLSWYQK2	4557.46	5186.59	3701.7
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	ASENSYFCQAAR	ASENSYFC(UniMod:4)QAAR	2	ASENSYFC(UniMod:4)QAAR2	3613.44	5450.83	2457.15
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	ASENTTQNTLAVTDICIIIPSK	ASENTTQNTLAVTDIC(UniMod:4)IIIPSK	3	ASENTTQNTLAVTDIC(UniMod:4)IIIPSK3	5505.35	6231.32	8353.01
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	ASEPNRVELGR	ASEPNRVELGR	3	ASEPNRVELGR3	35522.5	54710.9	28382.6
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	ASEPVDSLQQK	ASEPVDSLQQK	2	ASEPVDSLQQK2	52559.5	43171.8	37448.5
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	ASEQDEPTPQKPQSAFYYCR	ASEQDEPTPQKPQSAFYYC(UniMod:4)R	3	ASEQDEPTPQKPQSAFYYC(UniMod:4)R3	11219.1	8533.54	
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	ASEQIYGSPSSSPYECLR	ASEQIYGSPSSSPYEC(UniMod:4)LR	3	ASEQIYGSPSSSPYEC(UniMod:4)LR3	49058.5	45664.3	67985.5
Q0PMD2	Q0PMD2	ANTR1_RAT	Antxr1	Anthrax toxin receptor 1	1	ASEQIYYENSQGYR	ASEQIYYENSQGYR	2	ASEQIYYENSQGYR2	13050.2	7311.22	9990.04
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	ASEQPAGFDTLQK	ASEQPAGFDTLQK	2	ASEQPAGFDTLQK2	24956.2	21794.9	30069.5
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	ASESDAEIKDMK	ASESDAEIKDMK	2	ASESDAEIKDMK2	3032.32	4519.35	2842.26
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	ASESDAEIKDMK	ASESDAEIKDMK	3	ASESDAEIKDMK3	21769.1	25024.2	28121.8
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	ASESLILSVAEK	ASESLILSVAEK	2	ASESLILSVAEK2	14630.4	18324.7	12781.2
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	ASESSALTPPTPR	ASESSALTPPTPR	2	ASESSALTPPTPR2	30074.8	23122.8	19316.3
A0A8I5ZJM6	A0A8I5ZJM6	A0A8I5ZJM6_RAT	LOC100365438	Ig-like domain-containing protein	1	ASESVDTYLHWYQQKPNESPR	ASESVDTYLHWYQQKPNESPR	3	ASESVDTYLHWYQQKPNESPR3	40164.4	33224.9	45494.4
A0A8I5ZJM6	A0A8I5ZJM6	A0A8I5ZJM6_RAT	LOC100365438	Ig-like domain-containing protein	1	ASESVDTYLHWYQQKPNESPR	ASESVDTYLHWYQQKPNESPR	4	ASESVDTYLHWYQQKPNESPR4	95026.7	85860	94942.3
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	ASETDALR	ASETDALR	2	ASETDALR2	5429.3	7060.86	8566.43
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	ASEVFCWGQNK	ASEVFC(UniMod:4)WGQNK	2	ASEVFC(UniMod:4)WGQNK2	11132.8	16249	16676.2
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	ASEVLENLTQGK	ASEVLENLTQGK	2	ASEVLENLTQGK2	68597.9	80243.1	51013.8
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	ASEVQELQNDLDRETSSLQELEAQK	ASEVQELQNDLDRETSSLQELEAQK	3	ASEVQELQNDLDRETSSLQELEAQK3	5438.52	4413.53	5101.29
Q6P756	Q6P756	NECP2_RAT	Necap2	Adaptin ear-binding coat-associated protein 2	1	ASEWQLDQPSWSGR	ASEWQLDQPSWSGR	2	ASEWQLDQPSWSGR2	15329.1	10058	23405
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	ASEWVQQVSGLMDGK	ASEWVQQVSGLMDGK	2	ASEWVQQVSGLMDGK2	9824.32	8014.05	10066.4
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	ASEWVQQVSGLMDGK	ASEWVQQVSGLMDGK	3	ASEWVQQVSGLMDGK3		3715.13	2447.84
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	ASEYLTYWEPR	ASEYLTYWEPR	2	ASEYLTYWEPR2	8.29418e+06	9.92795e+06	8.85288e+06
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	ASEYLTYWEPR	ASEYLTYWEPR	3	ASEYLTYWEPR3	346994	460250	383811
Q5FWS5	Q5FWS5	Q5FWS5_RAT	Loxl1	Lysyl oxidase homolog	1	ASFCLEDSTCDFGNLK	ASFC(UniMod:4)LEDSTC(UniMod:4)DFGNLK	2	ASFC(UniMod:4)LEDSTC(UniMod:4)DFGNLK2	2745.59	4870.76	
Q5FWS5	Q5FWS5	Q5FWS5_RAT	Loxl1	Lysyl oxidase homolog	1	ASFCLEDSTCDFGNLKR	ASFC(UniMod:4)LEDSTC(UniMod:4)DFGNLKR	3	ASFC(UniMod:4)LEDSTC(UniMod:4)DFGNLKR3	4476.8	6431.12	
P16636	P16636	LYOX_RAT	Lox	Protein-lysine 6-oxidase	1	ASFCLEDTSCDYGYHR	ASFC(UniMod:4)LEDTSC(UniMod:4)DYGYHR	3	ASFC(UniMod:4)LEDTSC(UniMod:4)DYGYHR3	9400.65	7928.41	6757.05
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	ASFDENAPVGTPVMR	ASFDENAPVGTPVMR	2	ASFDENAPVGTPVMR2	156476	137439	141499
Q3KRD8	Q3KRD8	IF6_RAT	Eif6	Eukaryotic translation initiation factor 6	1	ASFENNCEVGCFAK	ASFENNC(UniMod:4)EVGC(UniMod:4)FAK	2	ASFENNC(UniMod:4)EVGC(UniMod:4)FAK2	5753.83		
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	ASFHELYNMYK	ASFHELYNMYK	2	ASFHELYNMYK2	2996.84	1868.08	4469.37
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	ASFHELYNMYK	ASFHELYNMYK	3	ASFHELYNMYK3	28394.3	31902.4	21120
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	ASFITANGVALLK	ASFITANGVALLK	2	ASFITANGVALLK2	2809.49	6219.3	6953.07
Q9WTQ2	Q9WTQ2	PODXL_RAT	Podxl	Podocalyxin	1	ASFKPAEDSCALELAPILDNQAVAVK	ASFKPAEDSC(UniMod:4)ALELAPILDNQAVAVK	3	ASFKPAEDSC(UniMod:4)ALELAPILDNQAVAVK3	537340	586497	522465
Q9WTQ2	Q9WTQ2	PODXL_RAT	Podxl	Podocalyxin	1	ASFKPAEDSCALELAPILDNQAVAVK	ASFKPAEDSC(UniMod:4)ALELAPILDNQAVAVK	4	ASFKPAEDSC(UniMod:4)ALELAPILDNQAVAVK4	12563.8	5645.18	14635.9
Q9WTQ2	Q9WTQ2	PODXL_RAT	Podxl	Podocalyxin	1	ASFKPAEDSCALELAPILDNQAVAVKR	ASFKPAEDSC(UniMod:4)ALELAPILDNQAVAVKR	4	ASFKPAEDSC(UniMod:4)ALELAPILDNQAVAVKR4	23410.8	33054.4	45729.7
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	ASFLQCVHVAEGHTK	ASFLQC(UniMod:4)VHVAEGHTK	4	ASFLQC(UniMod:4)VHVAEGHTK4	5775.03	7868.1	
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	ASFLVKPVLGFVR	ASFLVKPVLGFVR	3	ASFLVKPVLGFVR3	10379.6	16264.4	13273.1
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	ASFNHFDK	ASFNHFDK	2	ASFNHFDK2	35493.8	23120.1	28114.5
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	ASFNHFDKDHGGALGPEEFK	ASFNHFDKDHGGALGPEEFK	3	ASFNHFDKDHGGALGPEEFK3	35670.9	45224.8	24598.2
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	ASFNHFDKDHGGALGPEEFK	ASFNHFDKDHGGALGPEEFK	4	ASFNHFDKDHGGALGPEEFK4	331440	356149	369906
Q9Z1P2	Q8R4I6;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	ASFNHFDR	ASFNHFDR	2	ASFNHFDR2	125316	118155	111574
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	ASFNHFDRDHSGTLGPEEFK	ASFNHFDRDHSGTLGPEEFK	3	ASFNHFDRDHSGTLGPEEFK3	39564.4	48044.1	16126.2
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	ASFNHFDRDHSGTLGPEEFK	ASFNHFDRDHSGTLGPEEFK	4	ASFNHFDRDHSGTLGPEEFK4	797218	962976	809600
Q8R4I6	Q8R4I6	Q8R4I6_RAT	Actn3	Actinin alpha 3	1	ASFNHFDRK	ASFNHFDRK	2	ASFNHFDRK2	1531.89	3679.98	4724.92
D4A830	D4A830	D4A830_RAT	Ppa2	inorganic diphosphatase	1	ASFNMVVEIPR	ASFNMVVEIPR	2	ASFNMVVEIPR2	18730.3	15786.6	18059.3
Q4KMA2	Q4KMA2	RD23B_RAT	Rad23b	UV excision repair protein RAD23 homolog B	1	ASFNNPDR	ASFNNPDR	2	ASFNNPDR2	20806.6	9515.68	18265.9
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	ASFPILLNMMCSER	ASFPILLNMMC(UniMod:4)SER	2	ASFPILLNMMC(UniMod:4)SER2	22653.1	17419.7	37574.4
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	ASFQTLIQMMR	ASFQTLIQMMR	2	ASFQTLIQMMR2	33274	22413.8	31745
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	ASFSHDFTYLVSGSEDK	ASFSHDFTYLVSGSEDK	2	ASFSHDFTYLVSGSEDK2	4658	5783.68	6393.69
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	ASFSHDFTYLVSGSEDK	ASFSHDFTYLVSGSEDK	3	ASFSHDFTYLVSGSEDK3	44246.2	72736.9	59186
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	ASFSHDFTYLVSGSEDKYVYIWSTYHDLSK	ASFSHDFTYLVSGSEDKYVYIWSTYHDLSK	4	ASFSHDFTYLVSGSEDKYVYIWSTYHDLSK4	8502.24	13901.7	10415.7
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	ASFSKPLFQTVAAICR	ASFSKPLFQTVAAIC(UniMod:4)R	3	ASFSKPLFQTVAAIC(UniMod:4)R3	264270	281014	266044
P70470	P70470	LYPA1_RAT	Lypla1	Acyl-protein thioesterase 1	1	ASFSQGPINSANR	ASFSQGPINSANR	2	ASFSQGPINSANR2	19239.1	17867.5	16571.9
O88902	O88902	PTN23_RAT	Ptpn23	Tyrosine-protein phosphatase non-receptor type 23 (Fragment)	1	ASFTNSELHR	ASFTNSELHR	2	ASFTNSELHR2	4216.3		
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	ASFTPFVDPR	ASFTPFVDPR	2	ASFTPFVDPR2	348468	349406	364602
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	ASFVQTR	ASFVQTR	2	ASFVQTR2	834081	787955	793312
A0A8I6G251	A0A8I6G251	A0A8I6G251_RAT	Tnpo3	Transportin 3	1	ASFWLGELQR	ASFWLGELQR	2	ASFWLGELQR2	26963.6	28784.1	20920.3
D3ZYQ7	D3ZYQ7	D3ZYQ7_RAT	Klhl14	Kelch-like family member 14	1	ASFYACRLDK	ASFYAC(UniMod:4)RLDK	2	ASFYAC(UniMod:4)RLDK2	8313.22		8342.23
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	ASFYEEYGVIR	ASFYEEYGVIR	2	ASFYEEYGVIR2	12321.8	7938.22	12375.8
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	ASFYGFK	ASFYGFK	2	ASFYGFK2	32456.1	21040.5	24697.7
F1LVV4	F1LVV4	F1LVV4_RAT	Rcc2	Regulator of chromosome condensation 2	1	ASGAAAIITEPEHTK	ASGAAAIITEPEHTK	3	ASGAAAIITEPEHTK3	6160.84	1603.18	
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	ASGANYSFHK	ASGANYSFHK	2	ASGANYSFHK2	39541.3	22999.2	40276.4
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	ASGCSDNPNHHVNYLEHVVVR	ASGC(UniMod:4)SDNPNHHVNYLEHVVVR	3	ASGC(UniMod:4)SDNPNHHVNYLEHVVVR3	2509.43	1047.01	
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	ASGCSDNPNHHVNYLEHVVVR	ASGC(UniMod:4)SDNPNHHVNYLEHVVVR	4	ASGC(UniMod:4)SDNPNHHVNYLEHVVVR4	11771.2	27361.6	16245.5
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	ASGDAARPFLLQLAESAYR	ASGDAARPFLLQLAESAYR	3	ASGDAARPFLLQLAESAYR3	26465.5	39092.7	26890.1
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	ASGDFQTTK	ASGDFQTTK	2	ASGDFQTTK2		564413	
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	ASGDKEAEGAPQVEAGK	ASGDKEAEGAPQVEAGK	2	ASGDKEAEGAPQVEAGK2	47735	47258.1	38904.1
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	ASGDKEAEGAPQVEAGK	ASGDKEAEGAPQVEAGK	3	ASGDKEAEGAPQVEAGK3	886937	939300	991208
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	ASGDKEAEGAPQVEAGKR	ASGDKEAEGAPQVEAGKR	3	ASGDKEAEGAPQVEAGKR3	42872.7	44832.8	32240.8
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	ASGDKEAEGAPQVEAGKR	ASGDKEAEGAPQVEAGKR	4	ASGDKEAEGAPQVEAGKR4		59795.9	
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	ASGDMHLGK	ASGDMHLGK	2	ASGDMHLGK2	18214.6	17107.3	17165.9
Q8K3L6	Q8K3L6	GIMA5_RAT	Gimap5	GTPase IMAP family member 5	1	ASGEEQQGQLAELMALVR	ASGEEQQGQLAELMALVR	2	ASGEEQQGQLAELMALVR2	3007.28		2723.25
Q8K3L6	Q8K3L6	GIMA5_RAT	Gimap5	GTPase IMAP family member 5	1	ASGEEQQGQLAELMALVR	ASGEEQQGQLAELMALVR	3	ASGEEQQGQLAELMALVR3	5959.27	6919.18	3908.07
Q304F3	Q304F3	Q304F3_RAT	Tnnc2	Troponin C2, fast skeletal type	1	ASGEHVTDEEIESLMK	ASGEHVTDEEIESLMK	3	ASGEHVTDEEIESLMK3	11462.9	4228.32	3959.75
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	ASGEKPITQK	ASGEKPITQK	2	ASGEKPITQK2			5920.45
P19468	P19468	GSH1_RAT	Gclc	Glutamate--cysteine ligase catalytic subunit	1	ASGELMTVAR	ASGELMTVAR	2	ASGELMTVAR2	6505.28		
D3ZYT6	D3ZYT6	D3ZYT6_RAT	Treml1	Triggering receptor expressed on myeloid cells-like 1	1	ASGEPAQDLPNR	ASGEPAQDLPNR	2	ASGEPAQDLPNR2	4.34728e+06	4.53877e+06	4.74398e+06
D3ZYT6	D3ZYT6	D3ZYT6_RAT	Treml1	Triggering receptor expressed on myeloid cells-like 1	1	ASGEPAQDLPNR	ASGEPAQDLPNR	3	ASGEPAQDLPNR3	25048.9	28673.6	31347.2
Q5U2P0	Q5U2P0	DI3L1_RAT	Dis3l	DIS3-like exonuclease 1	1	ASGESPSEPMPTGR	ASGESPSEPMPTGR	2	ASGESPSEPMPTGR2	3741.16	2409.76	2660.21
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	ASGFPGETRPSIWGECPPK	ASGFPGETRPSIWGEC(UniMod:4)PPK	3	ASGFPGETRPSIWGEC(UniMod:4)PPK3	109037	124330	137299
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	ASGGAESCHIR	ASGGAESC(UniMod:4)HIR	2	ASGGAESC(UniMod:4)HIR2			17722.5
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	ASGGAESCHIR	ASGGAESC(UniMod:4)HIR	3	ASGGAESC(UniMod:4)HIR3			173828
D3Z8X6	D3Z8X6	D3Z8X6_RAT	Dtx3l	E3 ubiquitin-protein ligase	1	ASGGGECSVHPVGPGAPDTFEVK	ASGGGEC(UniMod:4)SVHPVGPGAPDTFEVK	3	ASGGGEC(UniMod:4)SVHPVGPGAPDTFEVK3	7009.93	3793.76	1087.2
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	ASGGGLSSPPGSAEASK	ASGGGLSSPPGSAEASK	2	ASGGGLSSPPGSAEASK2	8.29245e+06	9.04833e+06	1.02549e+07
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	ASGGGLSSPPGSAEASK	ASGGGLSSPPGSAEASK	3	ASGGGLSSPPGSAEASK3	174244	178519	176682
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ASGHPGDPESQQR	ASGHPGDPESQQR	2	ASGHPGDPESQQR2			157707
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ASGHPGDPESQQR	ASGHPGDPESQQR	3	ASGHPGDPESQQR3			54529
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	ASGIIDTLFQDR	ASGIIDTLFQDR	2	ASGIIDTLFQDR2	35268.5	33827.4	34408.8
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	ASGIIDTLFQDR	ASGIIDTLFQDR	3	ASGIIDTLFQDR3	59248.4	54639.3	69492.3
D3ZDZ1	A0A8I6A272;D3ZDZ1	D3ZDZ1_RAT	Apbb1ip	Amyloid beta precursor protein binding family B member 1 interacting protein	0	ASGIYYVPK	ASGIYYVPK	2	ASGIYYVPK2	10571.6	7541.69	3800.71
A0A8I6AS17	A0A8I6AS17	A0A8I6AS17_RAT	Bsdc1	BSD domain containing 1	1	ASGLEPRPPAR	ASGLEPRPPAR	3	ASGLEPRPPAR3	74370.1	104301	143108
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	ASGLGEAGMGAWLR	ASGLGEAGMGAWLR	2	ASGLGEAGMGAWLR2	19071.1	10866.3	15913.7
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	ASGLVPNVVVLVATVR	ASGLVPNVVVLVATVR	2	ASGLVPNVVVLVATVR2	16783.2	23611.8	17123.7
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	ASGLVPNVVVLVATVR	ASGLVPNVVVLVATVR	3	ASGLVPNVVVLVATVR3	2675.04	4459.16	8122.15
D3ZYT8	D3ZYT8	D3ZYT8_RAT	Pikfyve	1-phosphatidylinositol-3-phosphate 5-kinase	1	ASGMLSFFR	ASGMLSFFR	2	ASGMLSFFR2	2606.43	3975.46	4290.11
Q9R1Z0	A0A8I5ZZW7;Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	0	ASGNLETK	ASGNLETK	1	ASGNLETK1			10066.9
Q9R1Z0	A0A8I5ZZW7;Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	0	ASGNLETK	ASGNLETK	2	ASGNLETK2			302602
P62919	P62919;D4A6W6	RL8_RAT	Rpl8	Large ribosomal subunit protein uL2	0	ASGNYATVISHNPETK	ASGNYATVISHNPETK	3	ASGNYATVISHNPETK3	24300.5	27766.6	38989.9
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	ASGPGAAAQIQEVK	ASGPGAAAQIQEVK	2	ASGPGAAAQIQEVK2	91981.5	64774.8	75101.9
D3ZHA0	D3ZHA0	FLNC_RAT	Flnc	Filamin-C	1	ASGPGLER	ASGPGLER	2	ASGPGLER2	11002.5	17995.8	16494.1
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	ASGPGLNTTGVPASLPVEFTIDAK	ASGPGLNTTGVPASLPVEFTIDAK	3	ASGPGLNTTGVPASLPVEFTIDAK3	1.64263e+06	1.85431e+06	1.55034e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	ASGPGLNTTGVPASLPVEFTIDAK	ASGPGLNTTGVPASLPVEFTIDAK	4	ASGPGLNTTGVPASLPVEFTIDAK4		2950.88	
P15865	M0R7B4;P15865;A0A0G2K654	H14_RAT	H1-4	Histone H1.4	0	ASGPPVSELITK	ASGPPVSELITK	2	ASGPPVSELITK2	53017.6	11326.3	
P13668	P13668	STMN1_RAT	Stmn1	Stathmin	1	ASGQAFELILSPR	ASGQAFELILSPR	2	ASGQAFELILSPR2	9705.78	5070.72	7284.12
A0A0G2K2T1	A0A0G2K2T1	A0A0G2K2T1_RAT	Txlnb	Taxilin beta	1	ASGQVPLSPAQGSLAVVEAK	ASGQVPLSPAQGSLAVVEAK	2	ASGQVPLSPAQGSLAVVEAK2	2360.36	3416.9	1914.71
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	ASGSYEEQDVANGINQNVALAIAGNHFNLK	ASGSYEEQDVANGINQNVALAIAGNHFNLK	4	ASGSYEEQDVANGINQNVALAIAGNHFNLK4	3090.4	4307.46	
Q5XHY5	Q5XHY5	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	1	ASGTVNIR	ASGTVNIR	2	ASGTVNIR2	35601.6	18595	30898.9
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	ASGVEGADVVK	ASGVEGADVVK	2	ASGVEGADVVK2	269918	260698	280647
O88422	O88422	GALT5_RAT	Galnt5	Polypeptide N-acetylgalactosaminyltransferase 5	1	ASGVFINLALGK	ASGVFINLALGK	2	ASGVFINLALGK2	18580.1	18642.3	8866.88
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	ASGYEPK	ASGYEPK	1	ASGYEPK1	50889.3		20744.4
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	ASGYLELSNWPEVAPDPSVR	ASGYLELSNWPEVAPDPSVR	3	ASGYLELSNWPEVAPDPSVR3	97886.3	123992	99923
A0A8I6G1P7	A0A8I6AI27;A0A8I6G1P7;A0A8I6A3A5	A0A8I6G1P7_RAT	ENSRNOG00000062657	Ig-like domain-containing protein	0	ASGYTFTDYAMHWVK	ASGYTFTDYAMHWVK	2	ASGYTFTDYAMHWVK2	31631	41367.9	28758.8
A0A8I6G1P7	A0A8I6AI27;A0A8I6G1P7;A0A8I6A3A5	A0A8I6G1P7_RAT	ENSRNOG00000062657	Ig-like domain-containing protein	0	ASGYTFTDYAMHWVK	ASGYTFTDYAMHWVK	3	ASGYTFTDYAMHWVK3	244183	215029	253694
A0A8I6ABN8	A0A8I6ABN8	A0A8I6ABN8_RAT	ENSRNOG00000065459	Ig-like domain-containing protein	1	ASGYTFTDYAMNWVK	ASGYTFTDYAMNWVK	2	ASGYTFTDYAMNWVK2	123113	116964	142677
A0A8I6ABN8	A0A8I6ABN8	A0A8I6ABN8_RAT	ENSRNOG00000065459	Ig-like domain-containing protein	1	ASGYTFTDYAMNWVK	ASGYTFTDYAMNWVK	3	ASGYTFTDYAMNWVK3	900.101	4930.74	5694.87
F1LYM5	F1LYM5	F1LYM5_RAT	ENSRNOG00000070949	Ig-like domain-containing protein	1	ASGYTFTDYAMQWVK	ASGYTFTDYAMQWVK	3	ASGYTFTDYAMQWVK3	2967.8	2904.38	8190.38
D3ZWD9	D3ZWD9	D3ZWD9_RAT	ENSRNOG00000068279	Ig-like domain-containing protein	1	ASGYTFTDYVMNWVK	ASGYTFTDYVMNWVK	2	ASGYTFTDYVMNWVK2	221378	223001	114065
D3ZWD9	D3ZWD9	D3ZWD9_RAT	ENSRNOG00000068279	Ig-like domain-containing protein	1	ASGYTFTDYVMNWVK	ASGYTFTDYVMNWVK	3	ASGYTFTDYVMNWVK3	28522	52424.1	32167.7
D3ZC54	D3ZC54	D3ZC54_RAT	AABR07065823.2	Ig-like domain-containing protein	1	ASGYTFTDYWVSWVK	ASGYTFTDYWVSWVK	2	ASGYTFTDYWVSWVK2	48381.1	33998.3	52073.8
A0A8I6AIU4	A0A8I6AIU4	A0A8I6AIU4_RAT	ENSRNOG00000067551	Ig-like domain-containing protein	1	ASGYTFTDYYIHWVK	ASGYTFTDYYIHWVK	2	ASGYTFTDYYIHWVK2	5563.29	8525.33	7155.82
A0A8I6AIU4	A0A8I6AIU4	A0A8I6AIU4_RAT	ENSRNOG00000067551	Ig-like domain-containing protein	1	ASGYTFTDYYIHWVK	ASGYTFTDYYIHWVK	3	ASGYTFTDYYIHWVK3	39695.8	29307	28738.4
A0A8I6A6W7	A0A8I6A6W7	A0A8I6A6W7_RAT	ENSRNOG00000070729	Ig-like domain-containing protein	1	ASGYTFTDYYMHWVK	ASGYTFTDYYMHWVK	2	ASGYTFTDYYMHWVK2	1340.45	4668.75	2198.85
A0A8I6A6W7	A0A8I6A6W7	A0A8I6A6W7_RAT	ENSRNOG00000070729	Ig-like domain-containing protein	1	ASGYTFTDYYMHWVK	ASGYTFTDYYMHWVK	3	ASGYTFTDYYMHWVK3	42631.4	68139.7	37869.1
A0A8I6AGQ4	A0A8I6AGQ4	A0A8I6AGQ4_RAT	ENSRNOG00000070415	Ig-like domain-containing protein	1	ASGYTFTEYYMYWVK	ASGYTFTEYYMYWVK	2	ASGYTFTEYYMYWVK2	25451.6	14300.3	9919.35
A0A8I6AGQ4	A0A8I6AGQ4	A0A8I6AGQ4_RAT	ENSRNOG00000070415	Ig-like domain-containing protein	1	ASGYTFTEYYMYWVK	ASGYTFTEYYMYWVK	3	ASGYTFTEYYMYWVK3	3185.74		
A0A8I6AC05	A0A8I6AC05	A0A8I6AC05_RAT	ENSRNOG00000070455	Ig-like domain-containing protein	1	ASGYTFTQAGMQWLK	ASGYTFTQAGMQWLK	2	ASGYTFTQAGMQWLK2	9045.31	12965.5	14601.2
A0A8I6ADW6	A0A8I6ADW6	A0A8I6ADW6_RAT	ENSRNOG00000064626	Ig-like domain-containing protein	1	ASGYTFTSNHMNWIK	ASGYTFTSNHMNWIK	2	ASGYTFTSNHMNWIK2			3412.21
A0A8I6ADW6	A0A8I6ADW6	A0A8I6ADW6_RAT	ENSRNOG00000064626	Ig-like domain-containing protein	1	ASGYTFTSNHMNWIK	ASGYTFTSNHMNWIK	3	ASGYTFTSNHMNWIK3	28701.2	23141.7	32169.4
D3ZCD6	D3ZCD6	D3ZCD6_RAT	ENSRNOG00000066076	Ig-like domain-containing protein	1	ASGYTFTSNYMHWIR	ASGYTFTSNYMHWIR	2	ASGYTFTSNYMHWIR2	16748.6	21236.4	24126
D3ZCD6	D3ZCD6	D3ZCD6_RAT	ENSRNOG00000066076	Ig-like domain-containing protein	1	ASGYTFTSNYMHWIR	ASGYTFTSNYMHWIR	3	ASGYTFTSNYMHWIR3	91673	79625.1	67910.7
A0A8I6AKH5	A0A8I6AKH5	A0A8I6AKH5_RAT	ENSRNOG00000063713	Ig-like domain-containing protein	1	ASGYTFTSYDMHWIK	ASGYTFTSYDMHWIK	2	ASGYTFTSYDMHWIK2	13501.4	11658.8	12012.6
A0A8I6AKH5	A0A8I6AKH5	A0A8I6AKH5_RAT	ENSRNOG00000063713	Ig-like domain-containing protein	1	ASGYTFTSYDMHWIK	ASGYTFTSYDMHWIK	3	ASGYTFTSYDMHWIK3	96921.8	88228.8	118636
A0A8I5Y817	A0A8I5Y817	A0A8I5Y817_RAT	ENSRNOG00000069868	Ig-like domain-containing protein	1	ASGYTFTSYYISWIK	ASGYTFTSYYISWIK	2	ASGYTFTSYYISWIK2	24534.4	22273.1	32981.1
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	ASHDFHVIVEEPPR	ASHDFHVIVEEPPR	3	ASHDFHVIVEEPPR3	8267.8	10989.3	3645.28
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	ASHDFHVIVEEPPR	ASHDFHVIVEEPPR	4	ASHDFHVIVEEPPR4	15323.9	11751.3	9343.74
O08774	O08774	RGS12_RAT	Rgs12	Regulator of G-protein signaling 12	1	ASHEDVVK	ASHEDVVK	2	ASHEDVVK2			4189.62
P08721	P08721	OSTP_RAT	Spp1	Osteopontin	1	ASHESTEQSDAIDSAEK	ASHESTEQSDAIDSAEK	2	ASHESTEQSDAIDSAEK2	509.419	795.318	
P08721	P08721	OSTP_RAT	Spp1	Osteopontin	1	ASHESTEQSDAIDSAEK	ASHESTEQSDAIDSAEK	3	ASHESTEQSDAIDSAEK3	5383.84	10224.5	6351.24
P08721	P08721	OSTP_RAT	Spp1	Osteopontin	1	ASHESTEQSDAIDSAEKPDAIDSAER	ASHESTEQSDAIDSAEKPDAIDSAER	3	ASHESTEQSDAIDSAEKPDAIDSAER3	13781.4	15722.1	10170.1
P08721	P08721	OSTP_RAT	Spp1	Osteopontin	1	ASHESTEQSDAIDSAEKPDAIDSAER	ASHESTEQSDAIDSAEKPDAIDSAER	4	ASHESTEQSDAIDSAEKPDAIDSAER4	30104.9	26325.6	55861.7
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	ASHGYGGK	ASHGYGGK	1	ASHGYGGK1			1767.91
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	ASHGYGGK	ASHGYGGK	2	ASHGYGGK2	4986.99		7565.13
Q7TNZ6	Q7TNZ6	STRAA_RAT	Strada	STE20-related kinase adapter protein alpha	1	ASHILISTDGK	ASHILISTDGK	2	ASHILISTDGK2	2989.3	4210.7	
Q7TNZ6	Q7TNZ6	STRAA_RAT	Strada	STE20-related kinase adapter protein alpha	1	ASHILISTDGK	ASHILISTDGK	3	ASHILISTDGK3	19384.2	20087.2	16506.4
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	ASHQDQELLAQLEK	ASHQDQELLAQLEK	2	ASHQDQELLAQLEK2	3727.54	3854.28	4188.9
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	ASHQDQELLAQLEK	ASHQDQELLAQLEK	3	ASHQDQELLAQLEK3	37842.2	25565.5	22842.6
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	ASHQEVLEAGK	ASHQEVLEAGK	2	ASHQEVLEAGK2	12798	14160.9	11975.1
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	ASHQEVLEAGK	ASHQEVLEAGK	3	ASHQEVLEAGK3	79132.4	83713.3	87372
A0A8I6AHF2	A0A8I6AHF2	A0A8I6AHF2_RAT	ENSRNOG00000064789	Ig-like domain-containing protein	1	ASHSIGTNLHWYQQK	ASHSIGTNLHWYQQK	2	ASHSIGTNLHWYQQK2	2013.3	2700.38	
A0A8I6AHF2	A0A8I6AHF2	A0A8I6AHF2_RAT	ENSRNOG00000064789	Ig-like domain-containing protein	1	ASHSIGTNLHWYQQK	ASHSIGTNLHWYQQK	3	ASHSIGTNLHWYQQK3	12386.7	8473.97	13006.9
A0A8I6AHF2	A0A8I6AHF2	A0A8I6AHF2_RAT	ENSRNOG00000064789	Ig-like domain-containing protein	1	ASHSIGTNLHWYQQK	ASHSIGTNLHWYQQK	4	ASHSIGTNLHWYQQK4	43639.1	37159	23398
A0A8I6AE33	A0A8I6AE33	A0A8I6AE33_RAT	Wdr37	WD repeat domain 37	1	ASHSTSQLSQK	ASHSTSQLSQK	2	ASHSTSQLSQK2			9614.43
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	ASHTAPQVLFSHR	ASHTAPQVLFSHR	2	ASHTAPQVLFSHR2	24926.6	16724.2	10456.4
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	ASHTAPQVLFSHR	ASHTAPQVLFSHR	3	ASHTAPQVLFSHR3	247530	135845	176224
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	ASHTAPQVLFSHREPPLELK	ASHTAPQVLFSHREPPLELK	3	ASHTAPQVLFSHREPPLELK3	2686.73		3733.5
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	ASHTAPQVLFSHREPPLELK	ASHTAPQVLFSHREPPLELK	4	ASHTAPQVLFSHREPPLELK4	50003.8	49156.2	64456.8
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	ASHYSDQLTPR	ASHYSDQLTPR	2	ASHYSDQLTPR2	1803.9		5579.62
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	ASHYSDQLTPR	ASHYSDQLTPR	3	ASHYSDQLTPR3	26753.3	36349.9	30539.9
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	ASIAALEAK	ASIAALEAK	1	ASIAALEAK1	221859	237199	202080
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	ASIAALEAK	ASIAALEAK	2	ASIAALEAK2	74656.9	84474.7	81483.2
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	ASIDVTAAAQNIK	ASIDVTAAAQNIK	2	ASIDVTAAAQNIK2	507512	529879	566178
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	ASIEHELPTATQK	ASIEHELPTATQK	3	ASIEHELPTATQK3	7127.84	8684.61	15955.5
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	ASIEIANESGETPLDIAK	ASIEIANESGETPLDIAK	2	ASIEIANESGETPLDIAK2	29133.7	18558.6	15426.3
A0A0G2K1Q8	A0A0G2K1Q8	ABCA3_RAT	Abca3	Phospholipid-transporting ATPase ABCA3	1	ASIEISNYPQPR	ASIEISNYPQPR	2	ASIEISNYPQPR2	2909.83	1227.02	3801.97
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	ASIGQTRNFLVR	ASIGQTRNFLVR	3	ASIGQTRNFLVR3	18765.9	32694.6	43403.2
Q9Z1P2	Q9QXQ0;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	ASIHEAWTDGK	ASIHEAWTDGK	2	ASIHEAWTDGK2	10983.4	16773.4	15959.9
Q9Z1P2	Q9QXQ0;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	ASIHEAWTDGK	ASIHEAWTDGK	3	ASIHEAWTDGK3	127491	124210	102099
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	ASIHEAWTDGKEAMLR	ASIHEAWTDGKEAMLR	3	ASIHEAWTDGKEAMLR3	8635.46	11217	15893.6
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	ASIHEAWTDGKEAMLR	ASIHEAWTDGKEAMLR	4	ASIHEAWTDGKEAMLR4	47542.6	64049.5	58250.8
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	ASIHEVCSALAPLEPEFILK	ASIHEVC(UniMod:4)SALAPLEPEFILK	3	ASIHEVC(UniMod:4)SALAPLEPEFILK3	5151.84		
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	ASILWLIGENCER	ASILWLIGENC(UniMod:4)ER	2	ASILWLIGENC(UniMod:4)ER2	176644	175160	165812
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	ASILWLIGENCER	ASILWLIGENC(UniMod:4)ER	3	ASILWLIGENC(UniMod:4)ER3	18596.3	17634	19634
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	ASINPVTGR	ASINPVTGR	2	ASINPVTGR2	78235.5	98787.9	67851.9
Q91Y81	Q91Y81	SEPT2_RAT	Septin2	Septin-2	1	ASIPFSVVGSNQLIEAK	ASIPFSVVGSNQLIEAK	2	ASIPFSVVGSNQLIEAK2	35758.9	39927.3	50585.5
Q91Y81	Q91Y81	SEPT2_RAT	Septin2	Septin-2	1	ASIPFSVVGSNQLIEAK	ASIPFSVVGSNQLIEAK	3	ASIPFSVVGSNQLIEAK3	13685.8	12734.4	12007.6
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	ASIQEQAAVDGTR	ASIQEQAAVDGTR	2	ASIQEQAAVDGTR2	18461.1	24592.5	23800.8
F7EUW3	F7EUW3	F7EUW3_RAT	C2cd2l	C2CD2-like	1	ASISHVTCVDQSER	ASISHVTC(UniMod:4)VDQSER	2	ASISHVTC(UniMod:4)VDQSER2	3673.57	3856.9	
F7EUW3	F7EUW3	F7EUW3_RAT	C2cd2l	C2CD2-like	1	ASISHVTCVDQSER	ASISHVTC(UniMod:4)VDQSER	3	ASISHVTC(UniMod:4)VDQSER3	21798.4	20808.5	25093.5
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	ASISPSNVSALEPQTEMGSIVK	ASISPSNVSALEPQTEMGSIVK	3	ASISPSNVSALEPQTEMGSIVK3	24301.9	30848	26126
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	ASITSSASIWYHCEHR	ASITSSASIWYHC(UniMod:4)EHR	3	ASITSSASIWYHC(UniMod:4)EHR3	25316.2	25200.8	18073.2
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	ASITSSASIWYHCEHR	ASITSSASIWYHC(UniMod:4)EHR	4	ASITSSASIWYHC(UniMod:4)EHR4	55380.7	42156.7	58698.6
Q5BK49	Q5BK49	TACT_RAT	Cd96	T-cell surface protein tactile	1	ASITWLIDGR	ASITWLIDGR	2	ASITWLIDGR2	9172.45	11776.7	13232.9
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	ASIVTSLR	ASIVTSLR	2	ASIVTSLR2	62361.3	33139.9	76725
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	ASKPGWWLLDTAVGENQIAGMQTPFLIIDK	ASKPGWWLLDTAVGENQIAGMQTPFLIIDK	4	ASKPGWWLLDTAVGENQIAGMQTPFLIIDK4	18383.5	20543.5	21231.9
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	ASKPMKPAASDLPVPAEGVR	ASKPMKPAASDLPVPAEGVR	3	ASKPMKPAASDLPVPAEGVR3	205171	178340	182782
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	ASKPMKPAASDLPVPAEGVR	ASKPMKPAASDLPVPAEGVR	4	ASKPMKPAASDLPVPAEGVR4	889945	1.14105e+06	1.0787e+06
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	ASKPYCQPCFLK	ASKPYC(UniMod:4)QPC(UniMod:4)FLK	2	ASKPYC(UniMod:4)QPC(UniMod:4)FLK2	42079.5	40798.3	42614.3
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	ASKPYCQPCFLK	ASKPYC(UniMod:4)QPC(UniMod:4)FLK	3	ASKPYC(UniMod:4)QPC(UniMod:4)FLK3	111102	165901	141796
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	ASLAALPPLHVAK	ASLAALPPLHVAK	2	ASLAALPPLHVAK2	19086	20953.8	23073.6
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	ASLAALPPLHVAK	ASLAALPPLHVAK	3	ASLAALPPLHVAK3	314521	283173	412963
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	ASLACGPMVK	ASLAC(UniMod:4)GPMVK	2	ASLAC(UniMod:4)GPMVK2	148548	173671	160245
Q9Z2Z8	Q9Z2Z8	DHCR7_RAT	Dhcr7	7-dehydrocholesterol reductase	1	ASLADIWAK	ASLADIWAK	2	ASLADIWAK2	65068.8	58062.1	49546.2
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	ASLAETDK	ASLAETDK	2	ASLAETDK2		89142.4	
D4A533	D4A533	D4A533_RAT	Tapt1	Transmembrane anterior posterior transformation 1	1	ASLAFDLVSSR	ASLAFDLVSSR	2	ASLAFDLVSSR2	23486.7	13965.5	15773.5
Q5M7T7	Q5M7T7	Q5M7T7_RAT	Pla2g7	Phospholipase A2 group VII	1	ASLAFLQK	ASLAFLQK	2	ASLAFLQK2	212579	203534	195019
Q9QZR8	Q9QZR8	PDZD2_RAT	Pdzd2	PDZ domain-containing protein 2	1	ASLALAGIR	ASLALAGIR	2	ASLALAGIR2	6706.71	9987.46	4963.77
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	ASLASVHLFTAK	ASLASVHLFTAK	2	ASLASVHLFTAK2	1163.95		3329.29
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	ASLASVHLFTAK	ASLASVHLFTAK	3	ASLASVHLFTAK3	5474.78	5599.91	
F1M386	F1M386	RPGF2_RAT	Rapgef2	Rap guanine nucleotide exchange factor 2	1	ASLDAADSGR	ASLDAADSGR	2	ASLDAADSGR2	10466.5	9624.02	3113.31
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	ASLEHLVK	ASLEHLVK	2	ASLEHLVK2	56873.6	65456.6	62737
P08721	P08721	OSTP_RAT	Spp1	Osteopontin	1	ASLEHQSHEFHSHEDK	ASLEHQSHEFHSHEDK	2	ASLEHQSHEFHSHEDK2			15527.2
P08721	P08721	OSTP_RAT	Spp1	Osteopontin	1	ASLEHQSHEFHSHEDK	ASLEHQSHEFHSHEDK	3	ASLEHQSHEFHSHEDK3			8307.26
P08721	P08721	OSTP_RAT	Spp1	Osteopontin	1	ASLEHQSHEFHSHEDK	ASLEHQSHEFHSHEDK	4	ASLEHQSHEFHSHEDK4			10795.3
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	ASLETGESFPEDTKEPR	ASLETGESFPEDTKEPR	3	ASLETGESFPEDTKEPR3	30736.1	40345.3	26568.8
P97612	P97612	FAAH1_RAT	Faah	Fatty-acid amide hydrolase 1	1	ASLETMDK	ASLETMDK	2	ASLETMDK2	29980.9	32339.5	27349.9
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	ASLETVLGQAQDSMR	ASLETVLGQAQDSMR	2	ASLETVLGQAQDSMR2	14368.7	12288.8	15820.7
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	ASLGSDDGAQTK	ASLGSDDGAQTK	2	ASLGSDDGAQTK2	28588.2	25125.5	
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	ASLGSSASLEGSLSK	ASLGSSASLEGSLSK	2	ASLGSSASLEGSLSK2	4817.7	915.914	1746.73
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	ASLINNAFQLVSIGK	ASLINNAFQLVSIGK	2	ASLINNAFQLVSIGK2	3598.2		5783.32
Q6IRE4	Q6IRE4	TS101_RAT	Tsg101	Tumor susceptibility gene 101 protein	1	ASLISAVSDK	ASLISAVSDK	2	ASLISAVSDK2	123795	120752	142708
Q6IRE4	Q6IRE4	TS101_RAT	Tsg101	Tumor susceptibility gene 101 protein	1	ASLISAVSDKLR	ASLISAVSDKLR	3	ASLISAVSDKLR3	2141.79	6884.84	2512.86
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ASLLEQALFNAR	ASLLEQALFNAR	2	ASLLEQALFNAR2	59005.4	56258.8	55623
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ASLLEQALFNAR	ASLLEQALFNAR	3	ASLLEQALFNAR3	5329.64	6443.66	4365.48
A0A8J8YNR6	A0A8J8YNR6	A0A8J8YNR6_RAT	Fxr2	FMR1 autosomal homolog 2	1	ASLLGDMHFR	ASLLGDMHFR	3	ASLLGDMHFR3	8420.41	13153.8	19041.8
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	ASLLHSVPLHSSPR	ASLLHSVPLHSSPR	3	ASLLHSVPLHSSPR3	11984.3	13073	12793.5
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	ASLLQNESTNEQLQIHYK	ASLLQNESTNEQLQIHYK	3	ASLLQNESTNEQLQIHYK3	46179.4	44270.6	41923.1
Q3T1I9	Q3T1I9	RPAP1_RAT	Rpap1	RNA polymerase II-associated protein 1	1	ASLLTSQALYR	ASLLTSQALYR	2	ASLLTSQALYR2	11872.1	9320.75	7067.79
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	ASLLWALAAALER	ASLLWALAAALER	2	ASLLWALAAALER2			5876.45
Q9QY17	Q9QY17	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	1	ASLMNEDFEK	ASLMNEDFEK	2	ASLMNEDFEK2	170872	191087	179571
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ASLNNEIK	ASLNNEIK	1	ASLNNEIK1	4291.21	5996.72	2294.45
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ASLNNEIK	ASLNNEIK	2	ASLNNEIK2	1.16297e+06	1.52088e+06	1.38068e+06
B5DEN5	B5DEN5;F7EM91	B5DEN5_RAT	Eef1b2	Elongation factor 1-beta	0	ASLPGVKK	ASLPGVKK	2	ASLPGVKK2	14758.3	21836.2	9876.34
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	ASLPTLPSQVYDVPVQR	ASLPTLPSQVYDVPVQR	2	ASLPTLPSQVYDVPVQR2	281596	260202	257908
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	ASLPTLPSQVYDVPVQR	ASLPTLPSQVYDVPVQR	3	ASLPTLPSQVYDVPVQR3	99952.9	100251	119098
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	ASLQASAAAPEAR	ASLQASAAAPEAR	2	ASLQASAAAPEAR2	23581.8	26172.6	24301.6
P29315	P29315	RINI_RAT	Rnh1	Ribonuclease inhibitor	1	ASLQELDLGSNK	ASLQELDLGSNK	2	ASLQELDLGSNK2	42825.7	37838.6	35227.7
Q32KJ9	Q32KJ9	ARSG_RAT	Arsg	Arylsulfatase G	1	ASLQEMDSLVGQIK	ASLQEMDSLVGQIK	2	ASLQEMDSLVGQIK2	4962.91	3964.99	
M0R9B9	M0R9B9	M0R9B9_RAT	AABR07034438.1	UBX domain protein 7	1	ASLQETHFDSAQAK	ASLQETHFDSAQAK	3	ASLQETHFDSAQAK3	5206.23	8542.91	7095.07
Q5FVH0	Q5FVH0	C1QT5_RAT	C1qtnf5	Complement C1q tumor necrosis factor-related protein 5	1	ASLQFDLVK	ASLQFDLVK	2	ASLQFDLVK2	12407.3	11764.2	6466.39
P25093	P25093	FAAA_RAT	Fah	Fumarylacetoacetase	1	ASLQNLLSASQAQLR	ASLQNLLSASQAQLR	2	ASLQNLLSASQAQLR2	2646.58		
A0A0U1RRU5	A0A0U1RRU5	A0A0U1RRU5_RAT	Tab1	TGF-beta activated kinase 1/MAP3K7 binding protein 1	1	ASLQSQLPEGVPQHQLLPQYQK	ASLQSQLPEGVPQHQLLPQYQK	3	ASLQSQLPEGVPQHQLLPQYQK3	5714.39	1648.7	
Q6QMY6	Q6QMY6	TSK_RAT	Tsku	Tsukushi	1	ASLSAPTIQSLNLSWNR	ASLSAPTIQSLNLSWNR	2	ASLSAPTIQSLNLSWNR2	131327	114766	123889
Q6QMY6	Q6QMY6	TSK_RAT	Tsku	Tsukushi	1	ASLSAPTIQSLNLSWNR	ASLSAPTIQSLNLSWNR	3	ASLSAPTIQSLNLSWNR3	38570	33352	34478.6
Q8CIN9	Q8CIN9	RFFL_RAT	Rffl	E3 ubiquitin-protein ligase rififylin	1	ASLSDLTHLEDIEGLTVR	ASLSDLTHLEDIEGLTVR	3	ASLSDLTHLEDIEGLTVR3		2646.64	9586.72
A0A0G2JZH4	A0A0G2JZH4	A0A0G2JZH4_RAT	Slc35a1	Solute carrier family 35 member A1	1	ASLSENVLGSPK	ASLSENVLGSPK	2	ASLSENVLGSPK2	14150.6	12561.3	11700.3
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	ASLSLADHR	ASLSLADHR	2	ASLSLADHR2	54353.7	61436.9	46464
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	ASLSPDASDFEHITADTPSRPLSATSNPFK	ASLSPDASDFEHITADTPSRPLSATSNPFK	4	ASLSPDASDFEHITADTPSRPLSATSNPFK4	108411	106871	121991
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	ASLSSTLEK	ASLSSTLEK	2	ASLSSTLEK2	31733.3	43157.6	40773.8
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	ASLSVLDR	ASLSVLDR	2	ASLSVLDR2	15633.1	11067.4	19473.2
Q5XIN7	Q5XIN7	PMGT1_RAT	Pomgnt1	Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1	1	ASLTATFNLFPEAK	ASLTATFNLFPEAK	2	ASLTATFNLFPEAK2	9514.68	9536.74	2959.39
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	ASLTEEK	ASLTEEK	2	ASLTEEK2	48073.7	48337	65010.1
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	ASLTLFCPEEGDWK	ASLTLFC(UniMod:4)PEEGDWK	2	ASLTLFC(UniMod:4)PEEGDWK2	8892.86	10780.3	10549.2
D3ZQ82	D3ZQ82	D3ZQ82_RAT	Rfx1	Regulatory factor X1	1	ASLVLLSK	ASLVLLSK	2	ASLVLLSK2	3387.74	1806.54	681.618
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	ASLVPMEHCITR	ASLVPMEHC(UniMod:4)ITR	2	ASLVPMEHC(UniMod:4)ITR2	192103	188705	173103
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	ASLVPMEHCITR	ASLVPMEHC(UniMod:4)ITR	3	ASLVPMEHC(UniMod:4)ITR3	1.65636e+06	1.88823e+06	1.7634e+06
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	ASLWTNMEK	ASLWTNMEK	2	ASLWTNMEK2	12143	19260.6	23793.6
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	ASLYPCPETPQER	ASLYPC(UniMod:4)PETPQER	2	ASLYPC(UniMod:4)PETPQER2	105212	100389	86667.9
F7EUH5	F7EUH5	F7EUH5_RAT	Plxdc2	Plexin domain containing 2	1	ASMGQDSPESR	ASMGQDSPESR	2	ASMGQDSPESR2	654889	675344	643669
A0A0G2K350	A0A0G2K350	A0A0G2K350_RAT	Napg	NSF attachment protein gamma	1	ASMMYLENGTPDTAAMALER	ASMMYLENGTPDTAAMALER	3	ASMMYLENGTPDTAAMALER3	2643.59	5117.39	7433.59
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	ASMSAELSIPGLDNATR	ASMSAELSIPGLDNATR	2	ASMSAELSIPGLDNATR2	100774	71917.3	71271
P70567	P70567	TMOD1_RAT	Tmod1	Tropomodulin-1	1	ASNAMMNNNDLVR	ASNAMMNNNDLVR	2	ASNAMMNNNDLVR2	13296.9	9296.94	6981.24
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	ASNGDAWVEAHGK	ASNGDAWVEAHGK	2	ASNGDAWVEAHGK2	12342.6	12424.2	8698.12
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	ASNGDAWVEAHGK	ASNGDAWVEAHGK	3	ASNGDAWVEAHGK3	70614.9	65716	71856.1
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	ASNGDTPTHEDLTK	ASNGDTPTHEDLTK	3	ASNGDTPTHEDLTK3	5792.61	4707.39	4946.73
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	ASNGPVPGSGHTK	ASNGPVPGSGHTK	2	ASNGPVPGSGHTK2			19708.3
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	ASNGPVPGSGHTK	ASNGPVPGSGHTK	3	ASNGPVPGSGHTK3			13215.8
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	ASNIITECK	ASNIITEC(UniMod:4)K	2	ASNIITEC(UniMod:4)K2	23714.5	29480.7	27388.4
F1LYU4	F1LYU4;A0A8I6GA77	F1LYU4_RAT	ENSRNOG00000071026	Ig-like domain-containing protein	0	ASNLASGIPAR	ASNLASGIPAR	2	ASNLASGIPAR2	156646	176732	156662
M0RCN6	M0RCN6	M0RCN6_RAT	RGD1563231	Similar to immunoglobulin kappa-chain VK-1	1	ASNLASGVPAR	ASNLASGVPAR	2	ASNLASGVPAR2	587457	537957	502165
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	ASNLENSTYDLYTIPK	ASNLENSTYDLYTIPK	2	ASNLENSTYDLYTIPK2	122913	131841	128843
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	ASNLENSTYDLYTIPK	ASNLENSTYDLYTIPK	3	ASNLENSTYDLYTIPK3	16467.5	15644.6	20578.6
Q8K3V3	Q8K3V3	AGRG1_RAT	Adgrg1	Adhesion G-protein coupled receptor G1	1	ASNLLCYR	ASNLLC(UniMod:4)YR	2	ASNLLC(UniMod:4)YR2	25459.2	35156.4	24155.4
Q56AP7	Q56AP7	CRBN_RAT	Crbn	Protein cereblon	1	ASNLNLIGR	ASNLNLIGR	2	ASNLNLIGR2	11565.7	9211.8	8877.42
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	ASNLPLDMR	ASNLPLDMR	2	ASNLPLDMR2	1.36793e+07	1.62275e+07	1.53846e+07
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	ASNLPLDMREFVLLFMVFDEK	ASNLPLDMREFVLLFMVFDEK	3	ASNLPLDMREFVLLFMVFDEK3	1394.86	23770.5	45145.6
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	ASNLPLDMREFVLLFMVFDEKK	ASNLPLDMREFVLLFMVFDEKK	3	ASNLPLDMREFVLLFMVFDEKK3	4262.32	35540.5	17114.1
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	ASNLPLDMREFVLLFMVFDEKK	ASNLPLDMREFVLLFMVFDEKK	4	ASNLPLDMREFVLLFMVFDEKK4	32044.8	12708.4	3265.54
Q9EPB1	Q9EPB1	DPP2_RAT	Dpp7	Dipeptidyl peptidase 2	1	ASNSEDPPSVVEVR	ASNSEDPPSVVEVR	2	ASNSEDPPSVVEVR2	49372.6	38675.2	48509.9
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	ASNTADTLFQEVLGR	ASNTADTLFQEVLGR	2	ASNTADTLFQEVLGR2	1.43531e+06	1.74518e+06	1.59946e+06
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	ASNTSEVYFDGVK	ASNTSEVYFDGVK	2	ASNTSEVYFDGVK2	10837.3	16932.2	13360.6
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	ASPALGSGPDGSGDSLEMSSLDR	ASPALGSGPDGSGDSLEMSSLDR	3	ASPALGSGPDGSGDSLEMSSLDR3	22021.4	22474	38391.8
D4A748	D4A748	D4A748_RAT	Wdfy4	WDFY family member 4	1	ASPAVTALAVTR	ASPAVTALAVTR	2	ASPAVTALAVTR2	8274.11	5738.71	11376.7
Q3L7M0	Q3L7M0	GGTA1_RAT	Ggta1	N-acetyllactosaminide alpha-1,3-galactosyltransferase	1	ASPDEFTYER	ASPDEFTYER	2	ASPDEFTYER2	33555.7	26600.6	29733.2
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	ASPDLVPMGEWTAR	ASPDLVPMGEWTAR	2	ASPDLVPMGEWTAR2	77506.6	86326.5	69535.3
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	ASPDQNASTHTPQSSAK	ASPDQNASTHTPQSSAK	2	ASPDQNASTHTPQSSAK2			2244.52
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	ASPDQNASTHTPQSSAK	ASPDQNASTHTPQSSAK	3	ASPDQNASTHTPQSSAK3			12887.3
Q501R9	Q501R9	NBR1_RAT	Nbr1	Next to BRCA1 gene 1 protein	1	ASPDSTVLTK	ASPDSTVLTK	2	ASPDSTVLTK2	6191.28		4684.8
P06765	P06765	PLF4_RAT	Pf4	Platelet factor 4	1	ASPEESDGDLSCVCVK	ASPEESDGDLSC(UniMod:4)VC(UniMod:4)VK	2	ASPEESDGDLSC(UniMod:4)VC(UniMod:4)VK2	754159	768045	798651
P06765	P06765	PLF4_RAT	Pf4	Platelet factor 4	1	ASPEESDGDLSCVCVK	ASPEESDGDLSC(UniMod:4)VC(UniMod:4)VK	3	ASPEESDGDLSC(UniMod:4)VC(UniMod:4)VK3	50177.7	51271.8	59437.8
Q811U3	Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	1	ASPEMSDR	ASPEMSDR	2	ASPEMSDR2	26637.8		20696.4
Q5U2N3	Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	1	ASPEPSALPAQR	ASPEPSALPAQR	2	ASPEPSALPAQR2	22828.4	29572	16115.8
O35048	O35048	3BHS7_RAT	Hsd3b7	3 beta-hydroxysteroid dehydrogenase type 7	1	ASPETIHK	ASPETIHK	2	ASPETIHK2			24343.6
Q63198	Q63198	CNTN1_RAT	Cntn1	Contactin-1	1	ASPFPVYK	ASPFPVYK	2	ASPFPVYK2	9162.79	7346.21	
F1M6V8	F1M6V8	F1M6V8_RAT	Strn4	Striatin 4	1	ASPGPGGLSGGESLLVK	ASPGPGGLSGGESLLVK	2	ASPGPGGLSGGESLLVK2	36215.6	28083.6	
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	ASPGTQDLPGIQTGMMAPENK	ASPGTQDLPGIQTGMMAPENK	3	ASPGTQDLPGIQTGMMAPENK3	12949.7	15107.7	12513.5
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	ASPLLSSAPATDAADSIAR	ASPLLSSAPATDAADSIAR	2	ASPLLSSAPATDAADSIAR2	31210.9	27289.3	33383.3
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	ASPLLSSAPATDAADSIAR	ASPLLSSAPATDAADSIAR	3	ASPLLSSAPATDAADSIAR3	9034.6	6639.2	6660.34
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	ASPLPGSLQR	ASPLPGSLQR	2	ASPLPGSLQR2	58110	87450.9	70816.8
Q6P691	Q6P691	Q6P691_RAT	C2cd2	C2 calcium-dependent domain containing 2	1	ASPLSSESPVR	ASPLSSESPVR	2	ASPLSSESPVR2	75431	43082.1	53176.2
B4F7E7	B4F7E7	PALS1_RAT	Pals1	Protein PALS1	1	ASPPFPLIANVQDLVQEVQTVLKPVHQK	ASPPFPLIANVQDLVQEVQTVLKPVHQK	4	ASPPFPLIANVQDLVQEVQTVLKPVHQK4	1672.26	2713.24	4003.98
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	ASPPLEGSR	ASPPLEGSR	2	ASPPLEGSR2	206129	200579	230735
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	ASPQPMISR	ASPQPMISR	2	ASPQPMISR2	207167	234494	247433
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	ASPQSDCCTCAPGR	ASPQSDC(UniMod:4)C(UniMod:4)TC(UniMod:4)APGR	2	ASPQSDC(UniMod:4)C(UniMod:4)TC(UniMod:4)APGR2		344411	
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	ASPQSDCCTCAPGR	ASPQSDC(UniMod:4)C(UniMod:4)TC(UniMod:4)APGR	3	ASPQSDC(UniMod:4)C(UniMod:4)TC(UniMod:4)APGR3	6322.06	11753.2	
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	ASPSPQPSSQPLQINR	ASPSPQPSSQPLQINR	2	ASPSPQPSSQPLQINR2	83626.7	98725.3	73250.6
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	ASPSPQPSSQPLQINR	ASPSPQPSSQPLQINR	3	ASPSPQPSSQPLQINR3	31777.5	33226.2	38188.4
Q769K2	Q769K2	NAPEP_RAT	Napepld	N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D	1	ASPSQYMGPK	ASPSQYMGPK	2	ASPSQYMGPK2	110732	108096	120150
Q80VJ4	Q80VJ4	GPCP1_RAT	Gpcpd1	Glycerophosphocholine phosphodiesterase GPCPD1	1	ASPTVLHK	ASPTVLHK	2	ASPTVLHK2	24993.3	26284.7	17242.4
P16310	P16310	GHR_RAT	Ghr	Growth hormone receptor	1	ASPVLQR	ASPVLQR	2	ASPVLQR2	57012.2	41225.5	42124.4
D3ZF97	D3ZF97	D3ZF97_RAT	Erlec1	Endoplasmic reticulum lectin	1	ASPVNDIFCQSLPGSPFKPLTLR	ASPVNDIFC(UniMod:4)QSLPGSPFKPLTLR	3	ASPVNDIFC(UniMod:4)QSLPGSPFKPLTLR3	5423.09	6580.9	
G3V7L4	G3V7L4	G3V7L4_RAT	Cdh16	Cadherin 16	1	ASPVPALILASGPSR	ASPVPALILASGPSR	2	ASPVPALILASGPSR2	53955.1	67108.7	61053.9
G3V7L4	G3V7L4	G3V7L4_RAT	Cdh16	Cadherin 16	1	ASPVPALILASGPSR	ASPVPALILASGPSR	3	ASPVPALILASGPSR3	14952.3	13286.6	13158.8
Q4KLH3	Q4KLH3	OGRL1_RAT	Ogfrl1	Opioid growth factor receptor-like protein 1	1	ASPVPEDHAEAAGAEQGGDSTEGNAKPK	ASPVPEDHAEAAGAEQGGDSTEGNAKPK	3	ASPVPEDHAEAAGAEQGGDSTEGNAKPK3	6002.98	2223.02	
Q4KLH3	Q4KLH3	OGRL1_RAT	Ogfrl1	Opioid growth factor receptor-like protein 1	1	ASPVPEDHAEAAGAEQGGDSTEGNAKPK	ASPVPEDHAEAAGAEQGGDSTEGNAKPK	4	ASPVPEDHAEAAGAEQGGDSTEGNAKPK4	4001.96	5003.99	4019.9
D3ZSY8	D3ZSY8	D3ZSY8_RAT	Tbc1d10b	TBC1 domain family, member 10b	1	ASPVPGPGTPTR	ASPVPGPGTPTR	2	ASPVPGPGTPTR2	214607	231380	189449
Q63604	Q63604	NTRK2_RAT	Ntrk2	BDNF/NT-3 growth factors receptor	1	ASPVYLDILG	ASPVYLDILG	2	ASPVYLDILG2	3553.22	791.805	
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	ASQAPSSFQLLYDLK	ASQAPSSFQLLYDLK	2	ASQAPSSFQLLYDLK2	26088.4	35354.2	40208.4
P98105	P98105	LYAM2_RAT	Sele	E-selectin	1	ASQCEALSAPQR	ASQC(UniMod:4)EALSAPQR	2	ASQC(UniMod:4)EALSAPQR2	59598.6	83181.5	60526.9
P98105	P98105	LYAM2_RAT	Sele	E-selectin	1	ASQCEALSAPQR	ASQC(UniMod:4)EALSAPQR	3	ASQC(UniMod:4)EALSAPQR3	13530.8	14488.1	11252.1
Q80ZF4	Q80ZF4	Q80ZF4_RAT	Mapkapk2	non-specific serine/threonine protein kinase	1	ASQCPHIVHIVDVYENLYAGR	ASQC(UniMod:4)PHIVHIVDVYENLYAGR	4	ASQC(UniMod:4)PHIVHIVDVYENLYAGR4	17962.2	21244	10560.1
D3ZHM9	D3ZHM9;A0A8J8XVI1;A0A8I6A0Y4	D3ZHM9_RAT	ENSRNOG00000068649	Ig-like domain-containing protein	0	ASQDIGNYLR	ASQDIGNYLR	2	ASQDIGNYLR2	351861	343143	332896
A0A8I6AMS5	A0A8I6AMS5	A0A8I6AMS5_RAT	ENSRNOG00000068441	Ig-like domain-containing protein	1	ASQDIGNYLSWFQQKPGK	ASQDIGNYLSWFQQKPGK	3	ASQDIGNYLSWFQQKPGK3	71244.5	55303.3	53154.1
A0A8J8XVH8	A0A8J8XVH8	A0A8J8XVH8_RAT	ENSRNOG00000068221	Ig-like domain-containing protein	1	ASQDIGNYLSWYQQKPEK	ASQDIGNYLSWYQQKPEK	3	ASQDIGNYLSWYQQKPEK3	93531.4	82584	80395.8
A0A8I6A9G4	A0A8I6A9G4	A0A8I6A9G4_RAT	ENSRNOG00000068610	Ig-like domain-containing protein	1	ASQDVGIYVNWFQQK	ASQDVGIYVNWFQQK	2	ASQDVGIYVNWFQQK2	1207.91		
A0A8I6A9G4	A0A8I6A9G4	A0A8I6A9G4_RAT	ENSRNOG00000068610	Ig-like domain-containing protein	1	ASQDVGIYVNWFQQKPGK	ASQDVGIYVNWFQQKPGK	3	ASQDVGIYVNWFQQKPGK3	87187.5	79270.5	93450.4
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	ASQEFSEDGNLDDIFSR	ASQEFSEDGNLDDIFSR	2	ASQEFSEDGNLDDIFSR2	15187.4	13965.3	5803.38
P83565	A0A8I5ZP13;P83565	RM40_RAT	Mrpl40	Large ribosomal subunit protein mL40	0	ASQELVPIEDFITPVR	ASQELVPIEDFITPVR	2	ASQELVPIEDFITPVR2	3672.67	4545.22	
Q3B7U4	Q3B7U4	CTU2_RAT	Ctu2	Cytoplasmic tRNA 2-thiolation protein 2	1	ASQEPAGTEEAYK	ASQEPAGTEEAYK	2	ASQEPAGTEEAYK2		5699.35	4375.17
A0A8I6ARR5	A0A8I6ARR5	A0A8I6ARR5_RAT	ENSRNOG00000068013	Ig-like domain-containing protein	1	ASQGISNYLNWYQQKPDGTIK	ASQGISNYLNWYQQKPDGTIK	3	ASQGISNYLNWYQQKPDGTIK3	18022.6	14514.7	14539.6
A0A8I6AB22	A0A8I6AB22	A0A8I6AB22_RAT	ENSRNOG00000067079	Ig-like domain-containing protein	1	ASQGISTSIHWYQQK	ASQGISTSIHWYQQK	2	ASQGISTSIHWYQQK2	3996.08	2544.59	
A0A8I6AB22	A0A8I6AB22	A0A8I6AB22_RAT	ENSRNOG00000067079	Ig-like domain-containing protein	1	ASQGISTSIHWYQQK	ASQGISTSIHWYQQK	3	ASQGISTSIHWYQQK3	47746.3	49362.5	55727
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	ASQKPQPNFPSPEYMIFDHEFTK	ASQKPQPNFPSPEYMIFDHEFTK	3	ASQKPQPNFPSPEYMIFDHEFTK3	37516.4	38551.3	32322.1
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	ASQKPQPNFPSPEYMIFDHEFTK	ASQKPQPNFPSPEYMIFDHEFTK	4	ASQKPQPNFPSPEYMIFDHEFTK4	340687	401665	388878
O35964	O35964	SH3G1_RAT	Sh3gl1	Endophilin-A2	1	ASQLVSEK	ASQLVSEK	2	ASQLVSEK2	109169	113395	125275
A0A8I5ZMM5	D3ZMS7;A0A8I5ZMM5	A0A8I5ZMM5_RAT	ENSRNOG00000070091	Ig-like domain-containing protein	0	ASQNIYK	ASQNIYK	1	ASQNIYK1	30805.4	22093.1	20534.3
A0A8I5ZMM5	D3ZMS7;A0A8I5ZMM5	A0A8I5ZMM5_RAT	ENSRNOG00000070091	Ig-like domain-containing protein	0	ASQNIYK	ASQNIYK	2	ASQNIYK2	440201	337899	446320
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	ASQNLVVLAR	ASQNLVVLAR	2	ASQNLVVLAR2	23065.1	35673.9	22634.1
F1LTN6	F1LTN6	F1LTN6_RAT	AABR07060872.1	Ig-like domain-containing protein	1	ASQNVGTNVDWYQQK	ASQNVGTNVDWYQQK	2	ASQNVGTNVDWYQQK2	124071	127560	101637
F1LTN6	F1LTN6	F1LTN6_RAT	AABR07060872.1	Ig-like domain-containing protein	1	ASQNVGTNVDWYQQK	ASQNVGTNVDWYQQK	3	ASQNVGTNVDWYQQK3	14555.5	8269.72	13206.9
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	ASQPGPTAESQSSPHR	ASQPGPTAESQSSPHR	2	ASQPGPTAESQSSPHR2			4285.21
Q9WVK3	Q9WVK3	PECR_RAT	Pecr	Peroxisomal trans-2-enoyl-CoA reductase	1	ASQPPSSSTQVTAIQCNIR	ASQPPSSSTQVTAIQC(UniMod:4)NIR	3	ASQPPSSSTQVTAIQC(UniMod:4)NIR3	3827.72		
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	ASQPSSVISQVIDMR	ASQPSSVISQVIDMR	2	ASQPSSVISQVIDMR2	6393.62	5024.6	6881.96
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	ASQQEIQHIVNR	ASQQEIQHIVNR	3	ASQQEIQHIVNR3	3128.51	4758.45	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ASQQELSALQQNQSDLK	ASQQELSALQQNQSDLK	2	ASQQELSALQQNQSDLK2	8425.37	2833.31	5848.41
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ASQQELSALQQNQSDLK	ASQQELSALQQNQSDLK	3	ASQQELSALQQNQSDLK3	3831	4207.51	
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	ASQQINALR	ASQQINALR	2	ASQQINALR2	19567.8	22695.8	19853
P31211	P31211	CBG_RAT	Serpina6	Corticosteroid-binding globulin	1	ASQQINQHVK	ASQQINQHVK	2	ASQQINQHVK2			243628
P31211	P31211	CBG_RAT	Serpina6	Corticosteroid-binding globulin	1	ASQQINQHVK	ASQQINQHVK	3	ASQQINQHVK3			107951
G3V8S9	G3V8S9	G3V8S9_RAT	Camp	Cathelicidin antimicrobial peptide	1	ASQQLPEQCAFK	ASQQLPEQC(UniMod:4)AFK	2	ASQQLPEQC(UniMod:4)AFK2	75260.8	59175.1	74006.4
B2GV14	B2GV14	B2GV14_RAT	Txlna	Taxilin alpha	1	ASQSGALCDVSEELSR	ASQSGALC(UniMod:4)DVSEELSR	2	ASQSGALC(UniMod:4)DVSEELSR2	1882.1	994.878	4268.66
A0A8I6GLU1	A0A8I6GLU1	A0A8I6GLU1_RAT	ENSRNOG00000070189	Ig-like domain-containing protein	1	ASQSISNSLNWYQQKPDGTVK	ASQSISNSLNWYQQKPDGTVK	3	ASQSISNSLNWYQQKPDGTVK3	259421	234941	229590
A0A8I6GLU1	A0A8I6GLU1	A0A8I6GLU1_RAT	ENSRNOG00000070189	Ig-like domain-containing protein	1	ASQSISNSLNWYQQKPDGTVKR	ASQSISNSLNWYQQKPDGTVKR	4	ASQSISNSLNWYQQKPDGTVKR4	11140.3	12481.3	11470.2
D3ZQR5	D3ZQR5	D3ZQR5_RAT	ENSRNOG00000063256	Ig-like domain-containing protein	1	ASQSISTNLHWYQQKPNESPR	ASQSISTNLHWYQQKPNESPR	3	ASQSISTNLHWYQQKPNESPR3	5936.1	13883.8	1818.8
D3ZQR5	D3ZQR5	D3ZQR5_RAT	ENSRNOG00000063256	Ig-like domain-containing protein	1	ASQSISTNLHWYQQKPNESPR	ASQSISTNLHWYQQKPNESPR	4	ASQSISTNLHWYQQKPNESPR4	34319.8	34560.1	34402.1
F1M663	F1M663	F1M663_RAT	ENSRNOG00000071163	Ig-like domain-containing protein	1	ASQSISTSIHWYQQK	ASQSISTSIHWYQQK	2	ASQSISTSIHWYQQK2	3783.91		
F1M663	F1M663	F1M663_RAT	ENSRNOG00000071163	Ig-like domain-containing protein	1	ASQSISTSIHWYQQK	ASQSISTSIHWYQQK	3	ASQSISTSIHWYQQK3	35611.3	53455.4	34633.8
A0A8I5ZNF0	A0A8I5ZNF0	A0A8I5ZNF0_RAT	ENSRNOG00000065675	Ig-like domain-containing protein	1	ASQSIYNSLAWYQQK	ASQSIYNSLAWYQQK	2	ASQSIYNSLAWYQQK2	39714.1	25473.5	37515.6
A0A8I5ZNF0	A0A8I5ZNF0	A0A8I5ZNF0_RAT	ENSRNOG00000065675	Ig-like domain-containing protein	1	ASQSIYNSLAWYQQK	ASQSIYNSLAWYQQK	3	ASQSIYNSLAWYQQK3	16715.3	10365.7	14872.2
A0A8I6A0F4	A0A8I6A0F4;A0A8I6G8P8	A0A8I6A0F4_RAT	ENSRNOG00000064697	Ig-like domain-containing protein	0	ASQSLLYTDGK	ASQSLLYTDGK	2	ASQSLLYTDGK2	102039	48626.5	80128.5
Q3KR57	Q3KR57	Q3KR57_RAT	Grap2	GRB2-related adaptor protein 2	1	ASQSSPGDFSISVR	ASQSSPGDFSISVR	2	ASQSSPGDFSISVR2	12677.8	18589	12167.4
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	ASQSSQLANEK	ASQSSQLANEK	2	ASQSSQLANEK2	21981.6	9343.41	23805.4
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	ASQSSSPDMLQSEVSFSMGGR	ASQSSSPDMLQSEVSFSMGGR	3	ASQSSSPDMLQSEVSFSMGGR3	9194.38	10658.5	7730.79
F1M3Y4	F1M3Y4	F1M3Y4_RAT	LOC100361052	Ig-like domain-containing protein	1	ASQSVGTVVAWFQQKPGQSPK	ASQSVGTVVAWFQQKPGQSPK	3	ASQSVGTVVAWFQQKPGQSPK3	9255.98	7626.95	14839.1
F1LYU4	F1LYU4	F1LYU4_RAT	ENSRNOG00000071026	Ig-like domain-containing protein	1	ASQSVSISR	ASQSVSISR	2	ASQSVSISR2	21071.7	18556.8	19781.1
A0A8I6GA77	A0A8I6GA77	A0A8I6GA77_RAT	ENSRNOG00000070134	Ig-like domain-containing protein	1	ASQSVSISSINLMHWYQQKPGQQPK	ASQSVSISSINLMHWYQQKPGQQPK	4	ASQSVSISSINLMHWYQQKPGQQPK4	25328.1	29396.1	26150.6
E9PU64	E9PU64	E9PU64_RAT	Scin	Scinderin	1	ASQVATGIR	ASQVATGIR	2	ASQVATGIR2	11228.4		13009.9
Q05028	Q05028	PDGFB_RAT	Pdgfb	Platelet-derived growth factor subunit B (Fragment)	1	ASQVQMRPVQVR	ASQVQMRPVQVR	3	ASQVQMRPVQVR3	28304.4	39278.8	36491.2
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	ASREEILAQAK	ASREEILAQAK	2	ASREEILAQAK2	223247	287214	216963
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	ASREEILAQAK	ASREEILAQAK	3	ASREEILAQAK3	45567.9	1.02831e+07	77654.5
F1M9D0	F1M9D0	F1M9D0_RAT	Map3k2	Mitogen activated protein kinase kinase kinase 2	1	ASRPALSLQETR	ASRPALSLQETR	3	ASRPALSLQETR3	22098	15430.5	15836.9
M0R3X3	M0R3X3	M0R3X3_RAT	Arhgef10	Rho guanine nucleotide exchange factor 10	1	ASSALVVCGGQGHR	ASSALVVC(UniMod:4)GGQGHR	3	ASSALVVC(UniMod:4)GGQGHR3	5147.64	10309.9	2414.24
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	ASSAYLAATEDRDR	ASSAYLAATEDRDR	3	ASSAYLAATEDRDR3	11334.9	15028.9	15636.8
Q9EQH1	Q9EQH1	GAB2_RAT	Gab2	GRB2-associated-binding protein 2	1	ASSCETYEYPTR	ASSC(UniMod:4)ETYEYPTR	2	ASSC(UniMod:4)ETYEYPTR2	2842.41	2511.16	3360.26
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	ASSCGLSAWR	ASSC(UniMod:4)GLSAWR	2	ASSC(UniMod:4)GLSAWR2	9236.75	12184.9	12340.5
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	ASSDASSDPEPPETGEK	ASSDASSDPEPPETGEK	2	ASSDASSDPEPPETGEK2	4.028e+06	4.2309e+06	4.74467e+06
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	ASSDASSDPEPPETGEK	ASSDASSDPEPPETGEK	3	ASSDASSDPEPPETGEK3	612893	654328	776654
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	ASSDASSDPEPPETGEKEGTGSSGPK	ASSDASSDPEPPETGEKEGTGSSGPK	3	ASSDASSDPEPPETGEKEGTGSSGPK3	81644.2	62761	75575.5
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	ASSDLSIASSEEDK	ASSDLSIASSEEDK	2	ASSDLSIASSEEDK2	15648.9	16409.2	20886.5
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	ASSDLTGQQPSATCSPVQQTR	ASSDLTGQQPSATC(UniMod:4)SPVQQTR	3	ASSDLTGQQPSATC(UniMod:4)SPVQQTR3	3700.97	7523.35	6941.02
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	ASSDWWR	ASSDWWR	2	ASSDWWR2	14472.9	20203.9	25487.6
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	ASSEDMLNKPGSASSGVAR	ASSEDMLNKPGSASSGVAR	2	ASSEDMLNKPGSASSGVAR2	2422.02		2884.69
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	ASSEDMLNKPGSASSGVAR	ASSEDMLNKPGSASSGVAR	3	ASSEDMLNKPGSASSGVAR3	94449.5	89431	86757.8
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	ASSEGAEQSK	ASSEGAEQSK	2	ASSEGAEQSK2	20865.8	18288.6	26551
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	ASSEGAEQSKR	ASSEGAEQSKR	2	ASSEGAEQSKR2			3756.65
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	ASSEGAEQSKR	ASSEGAEQSKR	3	ASSEGAEQSKR3			10940.4
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	ASSEGGAATGAGLDSLHK	ASSEGGAATGAGLDSLHK	2	ASSEGGAATGAGLDSLHK2	56687.2	36799.2	37854.7
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	ASSEGGAATGAGLDSLHK	ASSEGGAATGAGLDSLHK	3	ASSEGGAATGAGLDSLHK3	339125	331182	332304
D4A7R3	D4A7R3	D4A7R3_RAT	Nup205	Nucleoporin 205	1	ASSEGVAIQGQQGTR	ASSEGVAIQGQQGTR	2	ASSEGVAIQGQQGTR2	5231.3	6589.57	2359.41
Q5XII9	Q5XII9	MFR1L_RAT	Mtfr1l	Mitochondrial fission regulator 1-like	1	ASSFADMMGILK	ASSFADMMGILK	2	ASSFADMMGILK2	6213.71	5575.73	10370.2
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	ASSFSDPVER	ASSFSDPVER	2	ASSFSDPVER2	58083.6	43808.5	62131.2
F1LNT3	F1LNT3	F1LNT3_RAT	R3hdm1	R3H domain containing 1	1	ASSFSGISVLTR	ASSFSGISVLTR	2	ASSFSGISVLTR2	3020	3887.69	3869.09
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	ASSFVLALEPELESR	ASSFVLALEPELESR	2	ASSFVLALEPELESR2	111494	111306	99785.5
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	ASSFVLALEPELESR	ASSFVLALEPELESR	3	ASSFVLALEPELESR3	26984.7	35586.8	36381.7
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	ASSGDISPYDNNSPVLSER	ASSGDISPYDNNSPVLSER	3	ASSGDISPYDNNSPVLSER3	33467.8	32422.4	23401.3
O08719	O08719	EVL_RAT	Evl	Ena/VASP-like protein	1	ASSGGGGGGLMEEMNK	ASSGGGGGGLMEEMNK	2	ASSGGGGGGLMEEMNK2	2288.53		3221.49
A0A8I5ZUE7	A0A8I5ZUE7	A0A8I5ZUE7_RAT	Zc3h7b	Zinc finger CCCH-type containing 7B	1	ASSGLGTPR	ASSGLGTPR	2	ASSGLGTPR2	11676.8	12430.8	8098.02
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	ASSIDSASNIELQTPGYEK	ASSIDSASNIELQTPGYEK	3	ASSIDSASNIELQTPGYEK3		9618.77	
D3ZQI6	D3ZQI6	D3ZQI6_RAT	Xpo4	Exportin 4	1	ASSIPGYSR	ASSIPGYSR	2	ASSIPGYSR2	57555.3	61138	41502
O08874	O08874	PKN2_RAT	Pkn2	Serine/threonine-protein kinase N2	1	ASSLGEIDDSSELR	ASSLGEIDDSSELR	2	ASSLGEIDDSSELR2	872.585	8651.74	5952.24
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	ASSLGIPDADCCR	ASSLGIPDADC(UniMod:4)C(UniMod:4)R	2	ASSLGIPDADC(UniMod:4)C(UniMod:4)R2	41837.4	38616.4	41641.5
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	ASSLGIPDADCCRR	ASSLGIPDADC(UniMod:4)C(UniMod:4)RR	3	ASSLGIPDADC(UniMod:4)C(UniMod:4)RR3	16163.4	17153.9	21245.1
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ASSLIEEAK	ASSLIEEAK	1	ASSLIEEAK1	16906.6	20311.7	36369.7
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ASSLIEEAK	ASSLIEEAK	2	ASSLIEEAK2	1.85383e+06	1.55869e+06	1.54592e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ASSLIEEAKK	ASSLIEEAKK	2	ASSLIEEAKK2	54109.1	60888.5	45697.1
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	ASSLISLLK	ASSLISLLK	2	ASSLISLLK2	41158.4	37230.5	30418.1
Q4KM77	Q4KM77	EI24_RAT	Ei24	Etoposide-induced protein 2.4 homolog	1	ASSLLAQR	ASSLLAQR	2	ASSLLAQR2	25262.4	24877.5	23348.8
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	ASSLNENVDHSALLK	ASSLNENVDHSALLK	3	ASSLNENVDHSALLK3	25817.4	16894.8	10839.1
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	ASSLPTLR	ASSLPTLR	2	ASSLPTLR2	118307	117077	116472
Q62733	Q62733	LAP2_RAT	Tmpo	Lamina-associated polypeptide 2, isoform beta	1	ASSNDSLVANR	ASSNDSLVANR	2	ASSNDSLVANR2	4804.39	6308.7	3689.67
A0A8I5ZTB8	A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	ASSPAQCVTPVQTVV	ASSPAQC(UniMod:4)VTPVQTVV	2	ASSPAQC(UniMod:4)VTPVQTVV2		1826.88	1815.25
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	ASSPQTEPLPR	ASSPQTEPLPR	2	ASSPQTEPLPR2	147643	174411	159695
Q925Q9	Q925Q9	SH3K1_RAT	Sh3kbp1	SH3 domain-containing kinase-binding protein 1	1	ASSPSLFSAEGK	ASSPSLFSAEGK	2	ASSPSLFSAEGK2	10890.7	9829.17	7836.97
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	ASSPWIPEESDK	ASSPWIPEESDK	2	ASSPWIPEESDK2	6417.39	5538.59	
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	ASSPWIPEESDKNSNPSLLR	ASSPWIPEESDKNSNPSLLR	3	ASSPWIPEESDKNSNPSLLR3	31982.6	39776.6	43649.4
P49806	P49806	RGS10_RAT	Rgs10	Regulator of G-protein signaling 10	1	ASSQVNVEGQSR	ASSQVNVEGQSR	2	ASSQVNVEGQSR2	114872	118040	91836.8
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	ASSSAGNLGVLIPVIAVLTR	ASSSAGNLGVLIPVIAVLTR	2	ASSSAGNLGVLIPVIAVLTR2	10734.4	10979.8	
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	ASSSILINEAEPTTNIQIR	ASSSILINEAEPTTNIQIR	3	ASSSILINEAEPTTNIQIR3	38005.7	33340.1	29564.9
F1M7Y5	F1M7Y5	KPCI_RAT	Prkci	Protein kinase C iota type	1	ASSSLGLQDFDLLR	ASSSLGLQDFDLLR	2	ASSSLGLQDFDLLR2	15184.4	8440.04	13407.5
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	ASSSQSLYCK	ASSSQSLYC(UniMod:4)K	2	ASSSQSLYC(UniMod:4)K2	1.06535e+06	1.15223e+06	1.17606e+06
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	ASSSQSLYCKPLGK	ASSSQSLYC(UniMod:4)KPLGK	2	ASSSQSLYC(UniMod:4)KPLGK2	2.43187e+06	2.55426e+06	2.44606e+06
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	ASSSQSLYCKPLGK	ASSSQSLYC(UniMod:4)KPLGK	3	ASSSQSLYC(UniMod:4)KPLGK3	76287.8	81015.4	90570.6
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	ASSSQSLYCKPLGK	ASSSQSLYC(UniMod:4)KPLGK	4	ASSSQSLYC(UniMod:4)KPLGK4	7400.46	7398.71	8461.49
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	ASSSSDSSIHITLTPIQQK	ASSSSDSSIHITLTPIQQK	3	ASSSSDSSIHITLTPIQQK3	8851.8		
Q91XJ1	Q91XJ1	BECN1_RAT	Becn1	Beclin-1	1	ASSSTMQVSFVCQR	ASSSTMQVSFVC(UniMod:4)QR	2	ASSSTMQVSFVC(UniMod:4)QR2		3343.12	4606.42
A0A8I6GF53	A0A8I6GF53	A0A8I6GF53_RAT	ENSRNOG00000067934	Ig-like domain-containing protein	1	ASSSVSYMHWFQQK	ASSSVSYMHWFQQK	2	ASSSVSYMHWFQQK2	14559	7259.33	12471.6
A0A8I6GF53	A0A8I6GF53	A0A8I6GF53_RAT	ENSRNOG00000067934	Ig-like domain-containing protein	1	ASSSVSYMHWFQQK	ASSSVSYMHWFQQK	3	ASSSVSYMHWFQQK3	36343.5	27373.7	33317
A0A8I5ZM48	A0A8I6AIR7;A0A8I5ZM48	A0A8I5ZM48_RAT	ENSRNOG00000062392	Ig-like domain-containing protein	0	ASSSVSYMHWYQQK	ASSSVSYMHWYQQK	2	ASSSVSYMHWYQQK2	9054.14	7050.56	8937.58
A0A8I5ZM48	A0A8I6AIR7;A0A8I5ZM48	A0A8I5ZM48_RAT	ENSRNOG00000062392	Ig-like domain-containing protein	0	ASSSVSYMHWYQQK	ASSSVSYMHWYQQK	3	ASSSVSYMHWYQQK3	44451.8	72637.6	40943.5
A0A8I5ZMT8	A0A8I5ZLW7;A0A8I5ZXJ9;A0A8I5ZMT8	A0A8I5ZMT8_RAT	ENSRNOG00000063035	Ig-like domain-containing protein	0	ASSSVSYMYWYQQK	ASSSVSYMYWYQQK	2	ASSSVSYMYWYQQK2	40585.2	47578.8	43234
A0A8I5ZMT8	A0A8I5ZLW7;A0A8I5ZXJ9;A0A8I5ZMT8	A0A8I5ZMT8_RAT	ENSRNOG00000063035	Ig-like domain-containing protein	0	ASSSVSYMYWYQQK	ASSSVSYMYWYQQK	3	ASSSVSYMYWYQQK3	9258.87	16044.6	10961
P15651	P15651	ACADS_RAT	Acads	Short-chain specific acyl-CoA dehydrogenase, mitochondrial	1	ASSTANLIFEDCR	ASSTANLIFEDC(UniMod:4)R	2	ASSTANLIFEDC(UniMod:4)R2	10370.7	12692.9	12360
P25093	P25093	FAAA_RAT	Fah	Fumarylacetoacetase	1	ASSVVVSGTPIR	ASSVVVSGTPIR	2	ASSVVVSGTPIR2	6829.29	6109.86	5527.92
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	ASSVVYSATK	ASSVVYSATK	2	ASSVVYSATK2	25347.6	20831.8	22016.2
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	ASSYIIR	ASSYIIR	2	ASSYIIR2	39452.4	25555.8	40195.8
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	ASSYQQGGGAMANPAAAAPSPQLSSEIER	ASSYQQGGGAMANPAAAAPSPQLSSEIER	3	ASSYQQGGGAMANPAAAAPSPQLSSEIER3	44241.4	39997	32485.4
A0A8I5ZRG3	A0A8I5ZRG3	A0A8I5ZRG3_RAT	Frmd4b	FERM domain containing 4B	1	ASSYSSVSSTNASGNWR	ASSYSSVSSTNASGNWR	2	ASSYSSVSSTNASGNWR2	6670.76	15610.9	7798.14
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	ASTDIAGQAVTISLVPVEEQTKPYR	ASTDIAGQAVTISLVPVEEQTKPYR	3	ASTDIAGQAVTISLVPVEEQTKPYR3	9187.79	7111.44	6395.7
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	ASTEEVPSLENLTVTEAGWDGLR	ASTEEVPSLENLTVTEAGWDGLR	3	ASTEEVPSLENLTVTEAGWDGLR3	28094.4	23086.7	31878.8
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	ASTHKPKEDEGLLR	ASTHKPKEDEGLLR	4	ASTHKPKEDEGLLR4	5467.59	4830.45	9524.53
A0A8I5ZU57	A0A8I5ZU57;F1M4U0	A0A8I5ZU57_RAT	Ccny	Cyclin Y	0	ASTIFLSK	ASTIFLSK	2	ASTIFLSK2	22849.2	27758.2	24075.9
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	ASTIFSAGTESAFQVTQIR	ASTIFSAGTESAFQVTQIR	3	ASTIFSAGTESAFQVTQIR3	7859.62	4162.64	7587.33
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	ASTLDAHDEAGGAEQR	ASTLDAHDEAGGAEQR	2	ASTLDAHDEAGGAEQR2	1722.24	1541.06	1322.94
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	ASTLDAHDEAGGAEQR	ASTLDAHDEAGGAEQR	3	ASTLDAHDEAGGAEQR3	51286.9	61993.3	45802.6
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	ASTLEAFGESAETR	ASTLEAFGESAETR	2	ASTLEAFGESAETR2	67943	89310.8	57105.6
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	ASTLEAFGESAETR	ASTLEAFGESAETR	3	ASTLEAFGESAETR3	1822.45	5403.75	
P48508	P48508	GSH0_RAT	Gclm	Glutamate--cysteine ligase regulatory subunit	1	ASTLHLQTGNLLNWGR	ASTLHLQTGNLLNWGR	3	ASTLHLQTGNLLNWGR3	10302.5	7091.91	9468.87
F1LU14	F1LU14	F1LU14_RAT	Snx32	Sorting nexin	1	ASTLLLQNTLVALK	ASTLLLQNTLVALK	2	ASTLLLQNTLVALK2	2600.26	4500.63	5099.02
P61023	A0A8I6AT96;P61023;A0A8I6AI64	CHP1_RAT	Chp1	Calcineurin B homologous protein 1	0	ASTLLRDEELEEIK	ASTLLRDEELEEIK	3	ASTLLRDEELEEIK3	18538.2	12956.1	20390.7
Q498R3	Q498R3	DJC10_RAT	Dnajc10	DnaJ homolog subfamily C member 10	1	ASTLLYGQLK	ASTLLYGQLK	2	ASTLLYGQLK2	31268.2	33593.5	29652.4
D4A447	D4A447	D4A447_RAT	Cd109	CD109 molecule	1	ASTNVFFK	ASTNVFFK	2	ASTNVFFK2	1646.62	3232.9	697.579
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	ASTPEIMATTPDGTVSYDNK	ASTPEIMATTPDGTVSYDNK	3	ASTPEIMATTPDGTVSYDNK3	16318.6	10607.9	16309.1
Q68SB1	Q68SB1	STAU2_RAT	Stau2	Double-stranded RNA-binding protein Staufen homolog 2	1	ASTSLQDQLDK	ASTSLQDQLDK	2	ASTSLQDQLDK2	2266.06	3054.64	
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	ASTSTEAPQPQR	ASTSTEAPQPQR	2	ASTSTEAPQPQR2	53057.5	53805.3	47596.8
D3ZBX9	D3ZBX9	D3ZBX9_RAT	Ccdc92	Coiled-coil domain containing 92	1	ASTVAYLTSQLHAAK	ASTVAYLTSQLHAAK	2	ASTVAYLTSQLHAAK2	5020.92		3367.15
D3ZBX9	D3ZBX9	D3ZBX9_RAT	Ccdc92	Coiled-coil domain containing 92	1	ASTVAYLTSQLHAAK	ASTVAYLTSQLHAAK	3	ASTVAYLTSQLHAAK3	32991.3	28049.7	25960.4
Q9ERE6	Q9ERE6	MPRIP_RAT	Mprip	Myosin phosphatase Rho-interacting protein	1	ASTVGSSDSGDPGCLEAEPGELER	ASTVGSSDSGDPGC(UniMod:4)LEAEPGELER	3	ASTVGSSDSGDPGC(UniMod:4)LEAEPGELER3	6159.25	3433.83	3658.93
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	ASTVVTVPTGR	ASTVVTVPTGR	2	ASTVVTVPTGR2	8990.3	13697.4	11951.7
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	ASTWLLVR	ASTWLLVR	2	ASTWLLVR2	12397.7	15158.9	15014.3
D3ZR64	D3ZR64	D3ZR64_RAT	Zfp598	RING-type E3 ubiquitin transferase	1	ASVAAQQQEETQR	ASVAAQQQEETQR	2	ASVAAQQQEETQR2	2927.03		
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	ASVALTPTAPSR	ASVALTPTAPSR	2	ASVALTPTAPSR2	38013.3	32321.2	26776.6
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	ASVASEVSTTSSTSKPPTGR	ASVASEVSTTSSTSKPPTGR	3	ASVASEVSTTSSTSKPPTGR3	41177.5	36619.4	37868.2
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	ASVCAEAYNPDEEEDDAESR	ASVC(UniMod:4)AEAYNPDEEEDDAESR	3	ASVC(UniMod:4)AEAYNPDEEEDDAESR3	24477.7	20638	28618.1
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	ASVCNVLLTCCK	ASVC(UniMod:4)NVLLTC(UniMod:4)C(UniMod:4)K	2	ASVC(UniMod:4)NVLLTC(UniMod:4)C(UniMod:4)K2	16244.5	13738	10715.8
P61227	P61227	RAP2B_RAT	Rap2b	Ras-related protein Rap-2b	1	ASVDELFAEIVR	ASVDELFAEIVR	2	ASVDELFAEIVR2	270005	273160	296454
P61227	P61227	RAP2B_RAT	Rap2b	Ras-related protein Rap-2b	1	ASVDELFAEIVR	ASVDELFAEIVR	3	ASVDELFAEIVR3	4712.71	10092.1	8369.83
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	ASVEDADTQNK	ASVEDADTQNK	2	ASVEDADTQNK2	92769.8		223200
A0A0G2K1Q8	A0A0G2K1Q8	ABCA3_RAT	Abca3	Phospholipid-transporting ATPase ABCA3	1	ASVEGGGFNER	ASVEGGGFNER	2	ASVEGGGFNER2		5285.04	
Q5XI55	Q5XI55	NGLY1_RAT	Ngly1	Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase	1	ASVEQLQK	ASVEQLQK	2	ASVEQLQK2	43742.6	29761.1	50052.1
P29994	P29994;P29995	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	0	ASVESCIR	ASVESC(UniMod:4)IR	2	ASVESC(UniMod:4)IR2	74747.8	60339.7	56088.2
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	ASVESLSQDVMR	ASVESLSQDVMR	2	ASVESLSQDVMR2	49708.7	52971.5	45275
Q9R080	Q9R080	GPSM1_RAT	Gpsm1	G-protein-signaling modulator 1	1	ASVGSLPGLR	ASVGSLPGLR	2	ASVGSLPGLR2	54345.4	72510	71314.1
Q3KR92	Q3KR92	TPST1_RAT	Tpst1	Protein-tyrosine sulfotransferase 1	1	ASVHSMISR	ASVHSMISR	2	ASVHSMISR2	3268.66	1939.84	3998.23
Q5RJS8	Q5RJS8	TPST2_RAT	Tpst2	Protein-tyrosine sulfotransferase 2	1	ASVHSMITR	ASVHSMITR	2	ASVHSMITR2	19254	19028.1	23891.7
Q66H39	Q66H39	ABCF3_RAT	Abcf3	ATP-binding cassette sub-family F member 3	1	ASVILAGLGFTPK	ASVILAGLGFTPK	2	ASVILAGLGFTPK2	6059.09	5634.36	4018.35
Q9EPQ0	Q9EPQ0	NCKX3_RAT	Slc24a3	Sodium/potassium/calcium exchanger 3 (Fragment)	1	ASVIMVDELLSAYPHQLSFSEAGLR	ASVIMVDELLSAYPHQLSFSEAGLR	3	ASVIMVDELLSAYPHQLSFSEAGLR3	3534.06	14652.5	10023.7
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	ASVITQVFHVPLEER	ASVITQVFHVPLEER	3	ASVITQVFHVPLEER3	55248.4	51470.6	49887.6
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	ASVLGFACK	ASVLGFAC(UniMod:4)K	2	ASVLGFAC(UniMod:4)K2	75327.7	74209.7	79076.7
Q9JLZ1	Q9JLZ1	GLRX3_RAT	Glrx3	Glutaredoxin-3	1	ASVMLFMK	ASVMLFMK	2	ASVMLFMK2	40907.5	39099.2	33988.7
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	ASVNLHSFQVR	ASVNLHSFQVR	3	ASVNLHSFQVR3	59975.7	77783.1	64438
P05426	P05426;F1LUE9;A0A8I6AL81	RL7_RAT	Rpl7	Large ribosomal subunit protein uL30	0	ASVNMLR	ASVNMLR	2	ASVNMLR2	23219.8	31859.9	33273.1
P30904	P30904	MIF_RAT	Mif	Macrophage migration inhibitory factor	1	ASVPEGFLSELTQQLAQATGK	ASVPEGFLSELTQQLAQATGK	3	ASVPEGFLSELTQQLAQATGK3	2992.8	2601.95	2559.31
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	ASVPIVLEK	ASVPIVLEK	2	ASVPIVLEK2	98266.1	106536	98867.5
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	ASVPMATPGAWK	ASVPMATPGAWK	2	ASVPMATPGAWK2	85982	86718.9	93698.3
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ASVPTIQDQASAMQLSQCAK	ASVPTIQDQASAMQLSQC(UniMod:4)AK	3	ASVPTIQDQASAMQLSQC(UniMod:4)AK3	1.07378e+06	1.00997e+06	1.026e+06
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	ASVSGIPGK	ASVSGIPGK	2	ASVSGIPGK2	20983	21170.3	18593.9
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	ASVTALIESVNGK	ASVTALIESVNGK	2	ASVTALIESVNGK2	15607.1	12824.8	11218.7
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	ASVTGYLLVYESVDGTVK	ASVTGYLLVYESVDGTVK	2	ASVTGYLLVYESVDGTVK2	56745.4	57228	46866.6
D4AEK9	D4AEK9	D4AEK9_RAT	Ccdc6	Coiled-coil domain containing 6	1	ASVTIQAR	ASVTIQAR	2	ASVTIQAR2	116420	115920	117708
B0K014	B0K014	B0K014_RAT	Dtd1	D-aminoacyl-tRNA deacylase	1	ASVTVGGEQISAIGR	ASVTVGGEQISAIGR	2	ASVTVGGEQISAIGR2	6336.51		5757.95
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	ASVTVTSIK	ASVTVTSIK	2	ASVTVTSIK2	210269	204089	179810
Q5U2R9	Q5U2R9	Q5U2R9_RAT	Scfd2	Sec1 family domain containing 2	1	ASVVFVDR	ASVVFVDR	2	ASVVFVDR2	23812.3	11731.2	14725.1
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	ASVVSSCSSLSTDSSPGSSSEDSVK	ASVVSSC(UniMod:4)SSLSTDSSPGSSSEDSVK	3	ASVVSSC(UniMod:4)SSLSTDSSPGSSSEDSVK3	7491.29	7120.75	14155.5
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	ASVVTASSGSALQYDTLISLMEHLK	ASVVTASSGSALQYDTLISLMEHLK	3	ASVVTASSGSALQYDTLISLMEHLK3	2082.78		
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	ASVVTLPVYLNFTR	ASVVTLPVYLNFTR	2	ASVVTLPVYLNFTR2	135121	129387	143575
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	ASVVTLPVYLNFTR	ASVVTLPVYLNFTR	3	ASVVTLPVYLNFTR3	3353.36	5885.54	4245.62
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	ASWEMNSEEK	ASWEMNSEEK	2	ASWEMNSEEK2	8659.42	12261.4	16368.3
Q01460	Q01460	DIAC_RAT	Ctbs	Di-N-acetylchitobiase	1	ASWIAQK	ASWIAQK	2	ASWIAQK2	5139.45	11760.3	8816.65
A0A8I6GK77	A0A8I6GK77	A0A8I6GK77_RAT	Bcas3	BCAS3, microtubule associated cell migration factor	1	ASWTLVR	ASWTLVR	2	ASWTLVR2	5966.82	6815.36	9394.67
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	ASWTNASK	ASWTNASK	2	ASWTNASK2	100378	128328	106748
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	ASWTRPEK	ASWTRPEK	2	ASWTRPEK2	23406.8	20649	23622.2
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	ASYAAEER	ASYAAEER	2	ASYAAEER2	26646.3	18100.4	13764.1
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	ASYAVSEAIPK	ASYAVSEAIPK	2	ASYAVSEAIPK2	40821.3	35412.7	46238.8
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	ASYDTLCVLDGDKDSINCAR	ASYDTLC(UniMod:4)VLDGDKDSINC(UniMod:4)AR	3	ASYDTLC(UniMod:4)VLDGDKDSINC(UniMod:4)AR3	32055.7	35623.5	31910.4
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	ASYEAWK	ASYEAWK	2	ASYEAWK2	35249.7	37882.5	43046.1
A0A0G2K8I5	A0A0G2K8I5	A0A0G2K8I5_RAT	Pcdh19	Protocadherin 19	1	ASYELIVVAHDHGK	ASYELIVVAHDHGK	4	ASYELIVVAHDHGK4		5410.91	3692.95
F7EKI5	F7EKI5	F7EKI5_RAT	Pcdh18	Protocadherin 18	1	ASYELQLTASDMGVPQR	ASYELQLTASDMGVPQR	2	ASYELQLTASDMGVPQR2	15735.2	8974.5	16200.8
P46413	P46413	GSHB_RAT	Gss	Glutathione synthetase	1	ASYILMEK	ASYILMEK	2	ASYILMEK2	7348.85	3038.41	
D3ZI07	O55165;D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	0	ASYLEIYQEEIRDLLSK	ASYLEIYQEEIRDLLSK	3	ASYLEIYQEEIRDLLSK3	7783.69	7504.27	
Q68FT3	Q68FT3	PYRD2_RAT	Pyroxd2	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2	1	ASYLLSLLRPQIYTDLELK	ASYLLSLLRPQIYTDLELK	3	ASYLLSLLRPQIYTDLELK3	7816.24	5010.84	4444.52
Q68FT3	Q68FT3	PYRD2_RAT	Pyroxd2	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2	1	ASYLLSLLRPQIYTDLELKK	ASYLLSLLRPQIYTDLELKK	4	ASYLLSLLRPQIYTDLELKK4	3240.1		3728.31
G3V9L1	G3V9L1	G3V9L1_RAT	Tex2	Testis expressed 2	1	ASYNETKPEVTYISQK	ASYNETKPEVTYISQK	3	ASYNETKPEVTYISQK3	4218.63	3786.65	8367.39
F7FJT3	F7FJT3	F7FJT3_RAT	Rad23a	UV excision repair protein RAD23	1	ASYNNPHR	ASYNNPHR	2	ASYNNPHR2			10840.8
D3ZN06	D3ZN06	D3ZN06_RAT	Cd248	CD248 molecule	1	ASYPDLPFGHK	ASYPDLPFGHK	2	ASYPDLPFGHK2	15656.4	7944.7	11658.8
D3ZN06	D3ZN06	D3ZN06_RAT	Cd248	CD248 molecule	1	ASYPDLPFGHK	ASYPDLPFGHK	3	ASYPDLPFGHK3	104981	96929.3	101029
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	ASYQEEVIK	ASYQEEVIK	2	ASYQEEVIK2	21168.5	20703.7	24194
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	ASYRPQQAEWPATR	ASYRPQQAEWPATR	3	ASYRPQQAEWPATR3	5967.49	5203.67	10542.2
G3V719	G3V719	G3V719_RAT	Plscr4	Phospholipid scramblase	1	ASYSIQNEK	ASYSIQNEK	2	ASYSIQNEK2	2158.26	3251	
Q6P7R8	Q6P7R8	DHB12_RAT	Hsd17b12	Very-long-chain 3-oxoacyl-CoA reductase	1	ASYSLFR	ASYSLFR	2	ASYSLFR2	9394.51	9308.76	9279.77
Q5U302	Q5U302;A0A0G2JYF7	Q5U302_RAT	Ctnna1	Catenin alpha 1	0	ASYVASTK	ASYVASTK	2	ASYVASTK2	2507.74	5893.96	
Q497B0	Q497B0	NIT2_RAT	Nit2	Omega-amidase NIT2	1	ASYVAWGHSTVVDPWGQVLTK	ASYVAWGHSTVVDPWGQVLTK	3	ASYVAWGHSTVVDPWGQVLTK3	34824.4	30563.4	39050.1
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	ATAAASGTTSSSNTVVAGQDSFPDPEESK	ATAAASGTTSSSNTVVAGQDSFPDPEESK	3	ATAAASGTTSSSNTVVAGQDSFPDPEESK3	4453.9	4523.99	5983.47
A0A0G2K089	A0A0G2K089	A0A0G2K089_RAT	Dennd4c	DENN domain containing 4C	1	ATAADSLFDR	ATAADSLFDR	2	ATAADSLFDR2	5844.33	15111.4	11362.4
Q4KLN3	Q4KLN3	Q4KLN3_RAT	Srpk1	SRSF protein kinase 1	1	ATAAECLR	ATAAEC(UniMod:4)LR	2	ATAAEC(UniMod:4)LR2	10381.2	10224.5	7885.79
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	ATAAFILANEHNVALFK	ATAAFILANEHNVALFK	2	ATAAFILANEHNVALFK2	11455.4	8787.86	3864.64
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	ATAAFILANEHNVALFK	ATAAFILANEHNVALFK	3	ATAAFILANEHNVALFK3	38613.6	46574.7	33351.1
F7FE56	F7FE56	F7FE56_RAT	Tpd52l1	TPD52 like 1	1	ATAAFSNVGTAISR	ATAAFSNVGTAISR	2	ATAAFSNVGTAISR2	101574	97758.6	88827.3
Q6AXN4	Q6AXN4	NDC1_RAT	Ndc1	Nucleoporin NDC1	1	ATAASGPCAGGSPR	ATAASGPC(UniMod:4)AGGSPR	2	ATAASGPC(UniMod:4)AGGSPR2		934.507	
D3ZE05	D3ZE05	D3ZE05_RAT	Cilp2	Cartilage intermediate layer protein 2	1	ATAATVGVAEPYLER	ATAATVGVAEPYLER	2	ATAATVGVAEPYLER2	26875.1	34194.5	30399.8
D3ZE05	D3ZE05	D3ZE05_RAT	Cilp2	Cartilage intermediate layer protein 2	1	ATAATVGVAEPYLER	ATAATVGVAEPYLER	3	ATAATVGVAEPYLER3	9782.77	7489.17	
P62994	P62994	GRB2_RAT	Grb2	Growth factor receptor-bound protein 2	1	ATADDELSFK	ATADDELSFK	2	ATADDELSFK2	71480.5	75556.9	93769.8
P23965	P23965	ECI1_RAT	Eci1	Enoyl-CoA delta isomerase 1, mitochondrial	1	ATADNLIK	ATADNLIK	2	ATADNLIK2	122991	106321	122212
Q64591	Q64591	DECR_RAT	Decr1	2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], mitochondrial	1	ATAEEITSK	ATAEEITSK	2	ATAEEITSK2	20612.7	12247.2	32313.1
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ATAELIWLNGK	ATAELIWLNGK	2	ATAELIWLNGK2	20362.7	9743.59	18891.2
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	ATAESANQCLPCDCNGR	ATAESANQC(UniMod:4)LPC(UniMod:4)DC(UniMod:4)NGR	2	ATAESANQC(UniMod:4)LPC(UniMod:4)DC(UniMod:4)NGR2	35156.1	32769.7	30609.9
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	ATAESANQCLPCDCNGR	ATAESANQC(UniMod:4)LPC(UniMod:4)DC(UniMod:4)NGR	3	ATAESANQC(UniMod:4)LPC(UniMod:4)DC(UniMod:4)NGR3	41159.3	55593.6	55071.8
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	ATAFPTEVK	ATAFPTEVK	2	ATAFPTEVK2	19059.3	25985.1	18522.9
Q5XI31	Q5XI31	PIGS_RAT	Pigs	GPI transamidase component PIG-S	1	ATAGAAATDLEVVR	ATAGAAATDLEVVR	2	ATAGAAATDLEVVR2	5180.31	4238.78	3068.93
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	ATAGAEETLTHDHVKPSSSK	ATAGAEETLTHDHVKPSSSK	3	ATAGAEETLTHDHVKPSSSK3	5903.53	6057.99	5282.24
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	ATAGAEETLTHDHVKPSSSK	ATAGAEETLTHDHVKPSSSK	4	ATAGAEETLTHDHVKPSSSK4	14594.8	11646.1	13604.8
P0DMW0;P0DMW1	P0DMW0;P0DMW1;P55063	HS71A_RAT;HS71B_RAT	Hspa1a;Hspa1b	Heat shock 70 kDa protein 1A	0	ATAGDTHLGGEDFDNR	ATAGDTHLGGEDFDNR	3	ATAGDTHLGGEDFDNR3	18402		
D3ZUY0	D3ZUY0	D3ZUY0_RAT	Rdh14	Retinol dehydrogenase 14	1	ATAGELLR	ATAGELLR	2	ATAGELLR2	25767.6	31085.3	25629.1
A0A8I5ZQE4	A0A8I5ZQE4	A0A8I5ZQE4_RAT	Supt5h	Transcription elongation factor SPT5	1	ATAISLMR	ATAISLMR	2	ATAISLMR2	10325.7	12890.9	
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	ATALAIMGDK	ATALAIMGDK	2	ATALAIMGDK2	302476	422867	382271
E9PSX4	E9PSX4	E9PSX4_RAT	Il3ra	Interleukin 3 receptor subunit alpha	1	ATALDSGVESDWSK	ATALDSGVESDWSK	2	ATALDSGVESDWSK2	14741.3	16987.8	12052.7
A0A0G2JYI7	A0A0G2JYI7	A0A0G2JYI7_RAT	Ubap2	Ubiquitin-associated protein 2	1	ATALVTSGK	ATALVTSGK	2	ATALVTSGK2	5225		8111.13
Q5XIR9	Q5XIR9	UBAC1_RAT	Ubac1	Ubiquitin-associated domain-containing protein 1	1	ATANLPACSTDR	ATANLPAC(UniMod:4)STDR	2	ATANLPAC(UniMod:4)STDR2	34743.4	29099.7	27660
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	ATAPAESSDESIK	ATAPAESSDESIK	2	ATAPAESSDESIK2	205601	205904	212220
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	ATAPAESSDESIKK	ATAPAESSDESIKK	3	ATAPAESSDESIKK3	18528.3	26083.9	16330.3
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	ATAPQTQHVSPMR	ATAPQTQHVSPMR	2	ATAPQTQHVSPMR2	72985.9	61004.3	70040.5
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	ATAPQTQHVSPMR	ATAPQTQHVSPMR	3	ATAPQTQHVSPMR3	2.2509e+06	2.26017e+06	2.49088e+06
Q4V8K5	Q4V8K5	BROX_RAT	Brox	BRO1 domain-containing protein BROX	1	ATAPVSFNYYGMITGPPASK	ATAPVSFNYYGMITGPPASK	3	ATAPVSFNYYGMITGPPASK3	6102.6	12505.2	6497.49
Q6AXY8	Q6AXY8	Q6AXY8_RAT	Dhrs1	Dehydrogenase/reductase 1	1	ATAQEAQSLGGR	ATAQEAQSLGGR	2	ATAQEAQSLGGR2	24628.2	18324.5	21798.3
A0A8I5ZXD6	D4A5F0;A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	0	ATAQPDSS	ATAQPDSS	1	ATAQPDSS1			13793.5
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	ATAQQEPDGKPASSPVIMASQTTHK	ATAQQEPDGKPASSPVIMASQTTHK	3	ATAQQEPDGKPASSPVIMASQTTHK3	500.081		4061.84
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	ATAQQEPDGKPASSPVIMASQTTHK	ATAQQEPDGKPASSPVIMASQTTHK	4	ATAQQEPDGKPASSPVIMASQTTHK4	16985.4	16747.6	16166.5
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	ATAQQEPDGKPASSPVIMASQTTHKEEK	ATAQQEPDGKPASSPVIMASQTTHKEEK	4	ATAQQEPDGKPASSPVIMASQTTHKEEK4	27606.9	32194.3	30850.5
Q7TS56	Q7TS56	CBR4_RAT	Cbr4	3-oxoacyl-[acyl-carrier-protein] reductase	1	ATASELGGIHLAFR	ATASELGGIHLAFR	3	ATASELGGIHLAFR3	5282.55	11256.9	7480.3
D3ZU52	D3ZU52	D3ZU52_RAT	Cops7b	COP9 signalosome subunit 7B	1	ATASSSAQEMEQQLAER	ATASSSAQEMEQQLAER	2	ATASSSAQEMEQQLAER2	9562.01	11819	12913
D3ZU52	D3ZU52	D3ZU52_RAT	Cops7b	COP9 signalosome subunit 7B	1	ATASSSAQEMEQQLAER	ATASSSAQEMEQQLAER	3	ATASSSAQEMEQQLAER3	25016.2	29064.8	35536.9
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	ATATACRPCPCPYIDASQR	ATATAC(UniMod:4)RPC(UniMod:4)PC(UniMod:4)PYIDASQR	3	ATATAC(UniMod:4)RPC(UniMod:4)PC(UniMod:4)PYIDASQR3	72053.5	79798.6	85613.5
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	ATATQFVHHALK	ATATQFVHHALK	3	ATATQFVHHALK3	12130.1	7322.66	
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	ATATQLLQHPFIK	ATATQLLQHPFIK	2	ATATQLLQHPFIK2	3501.52	6975.18	3792.52
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	ATATQLLQHPFIK	ATATQLLQHPFIK	3	ATATQLLQHPFIK3	102779	106672	122744
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	ATATQLLQHPFVK	ATATQLLQHPFVK	2	ATATQLLQHPFVK2	15060	6583.59	15851.3
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	ATATQLLQHPFVK	ATATQLLQHPFVK	3	ATATQLLQHPFVK3	46374.5	48792.4	41837.3
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	ATATWCTDSGSDDSRR	ATATWC(UniMod:4)TDSGSDDSRR	3	ATATWC(UniMod:4)TDSGSDDSRR3	16688.4	9105.67	9578.67
Q63716	Q63716;A0A0G2K3Z9	PRDX1_RAT	Prdx1	Peroxiredoxin-1	0	ATAVMPDGQFK	ATAVMPDGQFK	2	ATAVMPDGQFK2	316460	277637	271895
A0A8I5ZVI9	A0A8I5ZVI9	A0A8I5ZVI9_RAT	Ranbp3	RAN binding protein 3	1	ATAWTCLLEK	ATAWTC(UniMod:4)LLEK	2	ATAWTC(UniMod:4)LLEK2	15594.3	9637.7	18951.7
P09650	P09650	MCPT1_RAT	Mcpt1	Mast cell protease 1	1	ATCGGFLVTR	ATC(UniMod:4)GGFLVTR	2	ATC(UniMod:4)GGFLVTR2	33931.1	35471.2	40291.9
P21670	P21670	PSA4_RAT	Psma4	Proteasome subunit alpha type-4	1	ATCIGNNSAAAVSMLK	ATC(UniMod:4)IGNNSAAAVSMLK	2	ATC(UniMod:4)IGNNSAAAVSMLK2	70667.4	68881.9	71335
P21670	P21670	PSA4_RAT	Psma4	Proteasome subunit alpha type-4	1	ATCIGNNSAAAVSMLK	ATC(UniMod:4)IGNNSAAAVSMLK	3	ATC(UniMod:4)IGNNSAAAVSMLK3	213224	186630	248827
P21674	P21674	FST_RAT	Fst	Follistatin	1	ATCLLGR	ATC(UniMod:4)LLGR	2	ATC(UniMod:4)LLGR2	23005.4	14507.2	24578.2
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	ATCLVDEEEMK	ATC(UniMod:4)LVDEEEMK	2	ATC(UniMod:4)LVDEEEMK2	73130.9	86344	96206.8
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	ATCLVDEEEMKK	ATC(UniMod:4)LVDEEEMKK	2	ATC(UniMod:4)LVDEEEMKK2	2.48228e+06	6562.6	2496.24
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	ATCLVDEEEMKK	ATC(UniMod:4)LVDEEEMKK	3	ATC(UniMod:4)LVDEEEMKK3	10056.7	18171.8	29497.6
Q60GF7	Q60GF7	PIGX_RAT	Pigx	Phosphatidylinositol-glycan biosynthesis class X protein	1	ATCSEIILR	ATC(UniMod:4)SEIILR	2	ATC(UniMod:4)SEIILR2	6686.3	6042.18	5092.44
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	ATCYEDR	ATC(UniMod:4)YEDR	2	ATC(UniMod:4)YEDR2	136101		54472.8
P04692	P58775;P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	0	ATDAEADVASLNR	ATDAEADVASLNR	2	ATDAEADVASLNR2	1.12492e+06	990475	1.07427e+06
P04692	P58775;P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	0	ATDAEADVASLNR	ATDAEADVASLNR	3	ATDAEADVASLNR3	87588.3	110011	95246.7
P04692	P58775;P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	0	ATDAEADVASLNRR	ATDAEADVASLNRR	2	ATDAEADVASLNRR2	7454.73	7530.19	6918.69
P04692	P58775;P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	0	ATDAEADVASLNRR	ATDAEADVASLNRR	3	ATDAEADVASLNRR3	332490	368352	424380
A0A0G2JYR4	A0A8I6AP41;A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	0	ATDAQLCLESSPK	ATDAQLC(UniMod:4)LESSPK	2	ATDAQLC(UniMod:4)LESSPK2	16377.5	11715.2	12155.9
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	ATDAVSK	ATDAVSK	1	ATDAVSK1			2198.57
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	ATDCEGHDVASLLR	ATDC(UniMod:4)EGHDVASLLR	2	ATDC(UniMod:4)EGHDVASLLR2	10428.9	7165.81	18217.4
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	ATDCEGHDVASLLR	ATDC(UniMod:4)EGHDVASLLR	3	ATDC(UniMod:4)EGHDVASLLR3	274928	224996	274231
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	ATDFDVLSYK	ATDFDVLSYK	2	ATDFDVLSYK2	254292	211096	242743
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	ATDFDVLSYKK	ATDFDVLSYKK	2	ATDFDVLSYKK2	9088.3	3813.84	9305.08
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	ATDFDVLSYKK	ATDFDVLSYKK	3	ATDFDVLSYKK3	56804.6	74865.4	96215.5
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	ATDFEHR	ATDFEHR	2	ATDFEHR2	96536	70699.1	88795.4
A0A0G2JVT8	A0A8I6ARY9;A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	0	ATDFIEIGEQVSK	ATDFIEIGEQVSK	2	ATDFIEIGEQVSK2	15946.1	13927.9	9620.7
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	ATDFVVDR	ATDFVVDR	2	ATDFVVDR2	122541	150549	175648
P41562	P41562	IDHC_RAT	Idh1	Isocitrate dehydrogenase [NADP] cytoplasmic	1	ATDFVVPGPGK	ATDFVVPGPGK	2	ATDFVVPGPGK2	9642.53	10704	10447.2
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	ATDKEVGPLDCK	ATDKEVGPLDC(UniMod:4)K	3	ATDKEVGPLDC(UniMod:4)K3	12721.3	23026.1	9107.6
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	ATDKGEPPMSEMTSVR	ATDKGEPPMSEMTSVR	3	ATDKGEPPMSEMTSVR3	5564.61	9834.34	12045.4
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	ATDLDQEVK	ATDLDQEVK	2	ATDLDQEVK2	40132.1	31244.9	48782.8
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	ATDLDQEVKER	ATDLDQEVKER	3	ATDLDQEVKER3	9959.41	9397.54	16657.1
P62501	P62501	T22D1_RAT	Tsc22d1	TSC22 domain family protein 1	1	ATDLGEPER	ATDLGEPER	2	ATDLGEPER2	2573.75	6880.94	7509.06
A0A8I5ZUD8	A0A8I5ZUD8	A0A8I5ZUD8_RAT	Slc30a9	Proton-coupled zinc antiporter SLC30A9, mitochondrial	1	ATDLGLGK	ATDLGLGK	2	ATDLGLGK2	11104	6575.86	11706.2
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	ATDLKDWVQETMAK	ATDLKDWVQETMAK	2	ATDLKDWVQETMAK2	11718.1	7472.75	11860.9
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	ATDLKDWVQETMAK	ATDLKDWVQETMAK	3	ATDLKDWVQETMAK3	50280.8	55816.9	43757.4
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	ATDMPWK	ATDMPWK	2	ATDMPWK2	19847.7	38045.8	28121.2
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	ATDPASPHTGR	ATDPASPHTGR	2	ATDPASPHTGR2			3374.68
P58365	P58365	CAD23_RAT	Cdh23	Cadherin-23	1	ATDRDTGDGGLVNYR	ATDRDTGDGGLVNYR	3	ATDRDTGDGGLVNYR3	2860.25	5729.59	3321.42
B2RYW9	B2RYW9	FAHD2_RAT	Fahd2	Fumarylacetoacetate hydrolase domain-containing protein 2	1	ATDVMAYVAGFTVAHDVSAR	ATDVMAYVAGFTVAHDVSAR	3	ATDVMAYVAGFTVAHDVSAR3	85520.4	73577.1	75113.1
P10760	P10760	SAHH_RAT	Ahcy	Adenosylhomocysteinase	1	ATDVMIAGK	ATDVMIAGK	2	ATDVMIAGK2	27786.5	14988.5	13331.9
D3ZDW3	D3ZDW3	D3ZDW3_RAT	Tsc22d2	TSC22 domain family, member 2	1	ATDYGPEEVCER	ATDYGPEEVC(UniMod:4)ER	2	ATDYGPEEVC(UniMod:4)ER2	5178.73	3167.98	6659.21
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	ATEAGSLEAR	ATEAGSLEAR	2	ATEAGSLEAR2	130786	146874	130351
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	ATECLDVDECR	ATEC(UniMod:4)LDVDEC(UniMod:4)R	2	ATEC(UniMod:4)LDVDEC(UniMod:4)R2	82057.2	85538.2	88016.8
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	ATECLDVDECRR	ATEC(UniMod:4)LDVDEC(UniMod:4)RR	3	ATEC(UniMod:4)LDVDEC(UniMod:4)RR3	41305	48159	53859.7
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	ATEDGTPYDPYK	ATEDGTPYDPYK	2	ATEDGTPYDPYK2	72073.6	64312.5	74623.1
Q5XXR3	Q5XXR3	ARHG6_RAT	Arhgef6	Rho guanine nucleotide exchange factor 6	1	ATEDQLSERPCGR	ATEDQLSERPC(UniMod:4)GR	3	ATEDQLSERPC(UniMod:4)GR3	11806.6	13182.2	11717.2
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	ATEDSGVDR	ATEDSGVDR	2	ATEDSGVDR2			40030.8
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	ATEDSGVDRQPK	ATEDSGVDRQPK	2	ATEDSGVDRQPK2			2262.33
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	ATEDSGVDRQPK	ATEDSGVDRQPK	3	ATEDSGVDRQPK3			46897.1
Q5BJY6	Q5BJY6	NAGA_RAT	Amdhd2	N-acetylglucosamine-6-phosphate deacetylase	1	ATEDVGSGVALVAR	ATEDVGSGVALVAR	2	ATEDVGSGVALVAR2		3006.69	1684.04
Q10473	Q10473	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	1	ATEEDSQVPSIR	ATEEDSQVPSIR	2	ATEEDSQVPSIR2	109281	87729.5	114098
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	ATEEDVLEQK	ATEEDVLEQK	2	ATEEDVLEQK2	364004	309122	337949
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	ATEEDVLEQKVPEATNR	ATEEDVLEQKVPEATNR	2	ATEEDVLEQKVPEATNR2	24307.6	27984.6	17626.1
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	ATEEDVLEQKVPEATNR	ATEEDVLEQKVPEATNR	3	ATEEDVLEQKVPEATNR3	393045	433840	413149
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	ATEEDVLEQKVPEATNRR	ATEEDVLEQKVPEATNRR	3	ATEEDVLEQKVPEATNRR3	11207.3	18388.1	6725.01
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	ATEEDVLEQKVPEATNRR	ATEEDVLEQKVPEATNRR	4	ATEEDVLEQKVPEATNRR4	15520.4	31006.9	21142.6
Q3ZU82	Q3ZU82	GOGA5_RAT	Golga5	Golgin subfamily A member 5	1	ATEENSGSQSPEVSSSDSMPEGHKK	ATEENSGSQSPEVSSSDSMPEGHKK	4	ATEENSGSQSPEVSSSDSMPEGHKK4	3023.08	4273.7	5688.41
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	ATEEPSGTGSDELIK	ATEEPSGTGSDELIK	2	ATEEPSGTGSDELIK2	408777	406716	320880
Q9JHW0	Q9JHW0	PSB7_RAT	Psmb7	Proteasome subunit beta type-7	1	ATEGMVVADK	ATEGMVVADK	2	ATEGMVVADK2	2.10743e+06	2.11608e+06	2.28176e+06
Q9JHW0	Q9JHW0	PSB7_RAT	Psmb7	Proteasome subunit beta type-7	1	ATEGMVVADKNCSK	ATEGMVVADKNC(UniMod:4)SK	2	ATEGMVVADKNC(UniMod:4)SK2	15036.9	15436.3	10420.7
Q9JHW0	Q9JHW0	PSB7_RAT	Psmb7	Proteasome subunit beta type-7	1	ATEGMVVADKNCSK	ATEGMVVADKNC(UniMod:4)SK	3	ATEGMVVADKNC(UniMod:4)SK3		61198.2	4239.16
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	ATEGPEAAGLVPK	ATEGPEAAGLVPK	2	ATEGPEAAGLVPK2	36253.3	43586.2	47067.7
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	ATEGPEAHGAEEEPR	ATEGPEAHGAEEEPR	2	ATEGPEAHGAEEEPR2	6282.31	9592.57	2329.52
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	ATEGPEAHGAEEEPR	ATEGPEAHGAEEEPR	3	ATEGPEAHGAEEEPR3	185900	158245	140463
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	ATEIQFK	ATEIQFK	2	ATEIQFK2	12282.5	25876.6	16152.8
A0A0G2JYJ5	A0A0G2JYJ5	A0A0G2JYJ5_RAT	Ap5z1	Adaptor related protein complex 5 subunit zeta 1	1	ATELLTLLK	ATELLTLLK	2	ATELLTLLK2		2185.8	5654.59
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	ATEMVEVGPDDDEVGAER	ATEMVEVGPDDDEVGAER	2	ATEMVEVGPDDDEVGAER2	204778	229250	197641
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	ATEMVEVGPDDDEVGAER	ATEMVEVGPDDDEVGAER	3	ATEMVEVGPDDDEVGAER3		21435	17613.9
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	ATEMVEVGPDDDEVGAERGAETDLLR	ATEMVEVGPDDDEVGAERGAETDLLR	3	ATEMVEVGPDDDEVGAERGAETDLLR3	121191	121320	99624.3
A0A8I6G9X6	A0A8I6G9X6	A0A8I6G9X6_RAT	Kntc1	Kinetochore associated 1	1	ATEMVPLLK	ATEMVPLLK	2	ATEMVPLLK2	7138.8	5937.53	8317.21
Q794E4	Q8VHV7;Q794E4	HNRPF_RAT	Hnrnpf	Heterogeneous nuclear ribonucleoprotein F	0	ATENDIYNFFSPLNPVR	ATENDIYNFFSPLNPVR	3	ATENDIYNFFSPLNPVR3	10161.1	13693.7	17103.4
A0A8I5YBU7	A0A8I5YBU7	A0A8I5YBU7_RAT	Snx14	Sorting nexin 14	1	ATEPASPLVPFLQK	ATEPASPLVPFLQK	2	ATEPASPLVPFLQK2	3465.36	2623.21	
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	ATEPGMAR	ATEPGMAR	2	ATEPGMAR2		47248.9	61873.2
D4ACK7	D4ACK7	D4ACK7_RAT	Cnnm3	Metal transporter	1	ATEPSEAAAPTGEWR	ATEPSEAAAPTGEWR	2	ATEPSEAAAPTGEWR2	1681.68	4459.85	6869.18
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	ATEQLQTALR	ATEQLQTALR	2	ATEQLQTALR2	2763.04	2672.51	2363.7
P68182	P68182	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	1	ATEQYYAMK	ATEQYYAMK	2	ATEQYYAMK2	161452	149425	170051
Q9Z1Z1	Q9Z1Z1	E2AK3_RAT	Eif2ak3	Eukaryotic translation initiation factor 2-alpha kinase 3	1	ATESDDDVELRPR	ATESDDDVELRPR	3	ATESDDDVELRPR3	10193.9	21374.2	18535.9
G3V9L1	G3V9L1	G3V9L1_RAT	Tex2	Testis expressed 2	1	ATETEFIK	ATETEFIK	2	ATETEFIK2	12809.1		10096.3
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	ATETQGVNLLFSSR	ATETQGVNLLFSSR	2	ATETQGVNLLFSSR2	1.20299e+06	1.16447e+06	1.13447e+06
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	ATETQGVNLLFSSR	ATETQGVNLLFSSR	3	ATETQGVNLLFSSR3	5.71468e+06	6.23302e+06	6.24737e+06
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	ATETQGVNLLFSSRR	ATETQGVNLLFSSRR	3	ATETQGVNLLFSSRR3	36092.4	21381	34618.7
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	ATETSEVESLRPPR	ATETSEVESLRPPR	3	ATETSEVESLRPPR3	46424.7	54194	61100.3
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	ATEVMMQYVENLK	ATEVMMQYVENLK	2	ATEVMMQYVENLK2	47225	43126.7	50546.9
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	ATEVMMQYVENLK	ATEVMMQYVENLK	3	ATEVMMQYVENLK3	14349.5	13488.3	16988.9
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	ATEVMMQYVENLKR	ATEVMMQYVENLKR	2	ATEVMMQYVENLKR2	2923.79	3556.06	4784.35
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	ATEVMMQYVENLKR	ATEVMMQYVENLKR	3	ATEVMMQYVENLKR3	98474.7	104754	106063
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ATEVTVAR	ATEVTVAR	2	ATEVTVAR2	101769	114919	124872
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	ATEYHLGLLK	ATEYHLGLLK	2	ATEYHLGLLK2	1108.68	3452.71	
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	ATEYHLGLLK	ATEYHLGLLK	3	ATEYHLGLLK3	19044.8	14429.1	21390.5
F1LP42	F1LP42	F1LP42_RAT	Ihh	Hedgehog protein	1	ATFASHVQPGQYVLVAGVPGLQPAR	ATFASHVQPGQYVLVAGVPGLQPAR	3	ATFASHVQPGQYVLVAGVPGLQPAR3	67353.6	62486.1	69836.8
P27952	A0A0G2K8H4;A0A0U1RVI9;D3ZT78;A0A8I6ADQ7;D3ZAS1;P27952;A0A8J8XHT4;A0A8I5ZSA5;A0A8I6A3D4;D3ZQW7	RS2_RAT	Rps2	Small ribosomal subunit protein uS5	0	ATFDAISK	ATFDAISK	2	ATFDAISK2	123383	134009	116129
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	ATFDISLVVPK	ATFDISLVVPK	2	ATFDISLVVPK2	13368.4	10232.2	7999.13
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	ATFDSDTGLLR	ATFDSDTGLLR	2	ATFDSDTGLLR2	28902.9	24226.1	25390.8
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	ATFGNMNNAVR	ATFGNMNNAVR	2	ATFGNMNNAVR2	4235.32	5388.83	4436.21
Q5XIC0	Q5XIC0	ECI2_RAT	Eci2	Enoyl-CoA delta isomerase 2	1	ATFHTPFSHLGQSPEACSSYTFPK	ATFHTPFSHLGQSPEAC(UniMod:4)SSYTFPK	4	ATFHTPFSHLGQSPEAC(UniMod:4)SSYTFPK4	29900.3	12027.7	19053.7
Q63486	Q63486;Q63487	RRAGA_RAT	Rraga	Ras-related GTP-binding protein A	0	ATFLVISHYQCK	ATFLVISHYQC(UniMod:4)K	3	ATFLVISHYQC(UniMod:4)K3	16061.9	21416.1	6072.3
A0A8I6AL43	A0A8I6AL43	A0A8I6AL43_RAT	Ate1	Arginyl-tRNA--protein transferase 1	1	ATFQESYQVYK	ATFQESYQVYK	2	ATFQESYQVYK2		5230.97	
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	ATFQLTYEEVLK	ATFQLTYEEVLK	2	ATFQLTYEEVLK2	1.36574e+06	1.41703e+06	1.16799e+06
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	ATFQLTYEEVLK	ATFQLTYEEVLK	3	ATFQLTYEEVLK3	182472	255914	200627
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	ATFQLTYEEVLKR	ATFQLTYEEVLKR	2	ATFQLTYEEVLKR2	1.27361e+06	1.22862e+06	1.2412e+06
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	ATFQLTYEEVLKR	ATFQLTYEEVLKR	3	ATFQLTYEEVLKR3	1.03397e+07	1.14786e+07	1.19132e+07
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	ATFQLTYEEVLKRR	ATFQLTYEEVLKRR	3	ATFQLTYEEVLKRR3	16811.6	22419.9	18202.9
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	ATFQLTYEEVLKRR	ATFQLTYEEVLKRR	4	ATFQLTYEEVLKRR4	14878.4	26174.4	24521.8
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	ATFSSTSGLDSVSDSGEGR	ATFSSTSGLDSVSDSGEGR	2	ATFSSTSGLDSVSDSGEGR2	3898.65	1404.94	4795.14
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	ATFSSVPR	ATFSSVPR	2	ATFSSVPR2	137142	113098	127461
M0RE02	M0RE02	M0RE02_RAT	ENSRNOG00000069071	Ig-like domain-containing protein	1	ATFTVDK	ATFTVDK	2	ATFTVDK2	117766	76686.4	86452.7
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	ATFYGEQVDYYK	ATFYGEQVDYYK	2	ATFYGEQVDYYK2	29911.9	33553.8	27694.8
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	ATFYLLIGSANAAKPDLDK	ATFYLLIGSANAAKPDLDK	3	ATFYLLIGSANAAKPDLDK3	27981.9	33994.9	34976.9
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	ATFYLNVLEQK	ATFYLNVLEQK	2	ATFYLNVLEQK2	55515.1	40751.5	42890.4
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	ATFYLNVLQQR	ATFYLNVLQQR	2	ATFYLNVLQQR2	73000.8	91989.8	69011.3
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	ATFYLNVLQQR	ATFYLNVLQQR	3	ATFYLNVLQQR3	5701.92	4801.61	2254.64
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	ATGAAAAEAK	ATGAAAAEAK	1	ATGAAAAEAK1			4897.79
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	ATGAEEYAQQDVVR	ATGAEEYAQQDVVR	2	ATGAEEYAQQDVVR2	46156	34497.4	37347.1
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	ATGAEEYAQQDVVR	ATGAEEYAQQDVVR	3	ATGAEEYAQQDVVR3	3444.3	9399.82	2017.03
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	ATGAEEYAQQDVVRR	ATGAEEYAQQDVVRR	3	ATGAEEYAQQDVVRR3	11611.2	10373.7	10926
A0A8I5ZSK9	A0A8I5ZSK9	A0A8I5ZSK9_RAT	Gucd1	Guanylyl cyclase domain containing 1	1	ATGCIFYNNPAYADR	ATGC(UniMod:4)IFYNNPAYADR	2	ATGC(UniMod:4)IFYNNPAYADR2	1297.34		
P31325	P31325	PHKG2_RAT	Phkg2	Phosphorylase b kinase gamma catalytic chain, liver/testis isoform	1	ATGDEFAVK	ATGDEFAVK	2	ATGDEFAVK2	21395.2	17289.2	16440.7
Q6AYI8	Q6AYI8	Q6AYI8_RAT	Edem2	alpha-1,2-Mannosidase	1	ATGDPTLLELGR	ATGDPTLLELGR	2	ATGDPTLLELGR2	3130.04	4512.94	5900.79
D4AB70	D4AB70	D4AB70_RAT	Edem3	alpha-1,2-Mannosidase	1	ATGDPYYLEVGK	ATGDPYYLEVGK	2	ATGDPYYLEVGK2	20334.5	17058.3	19214.8
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	ATGDWFYDQK	ATGDWFYDQK	2	ATGDWFYDQK2	456964	468566	489222
Q8R553	Q8R553	CSTN3_RAT	Clstn3	Calsyntenin-3	1	ATGEGLIR	ATGEGLIR	2	ATGEGLIR2	24433.7	20413.5	29415.8
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	ATGEPGVFVCTHHSSEAVSVSPK	ATGEPGVFVC(UniMod:4)THHSSEAVSVSPK	4	ATGEPGVFVC(UniMod:4)THHSSEAVSVSPK4	6867.41		7823.54
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	ATGEPVPTIEWLR	ATGEPVPTIEWLR	2	ATGEPVPTIEWLR2	6179.18		6975.75
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	ATGFSPGYPGGFTIPR	ATGFSPGYPGGFTIPR	2	ATGFSPGYPGGFTIPR2	18305.1	14610.8	15303.8
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	ATGGLHSPEVEQSLK	ATGGLHSPEVEQSLK	2	ATGGLHSPEVEQSLK2		906.057	2626.89
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	ATGGLHSPEVEQSLK	ATGGLHSPEVEQSLK	3	ATGGLHSPEVEQSLK3	22487	18189.4	19896.6
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	ATGGLHSPEVEQSLKK	ATGGLHSPEVEQSLKK	4	ATGGLHSPEVEQSLKK4	10818.7	7635.15	6170.97
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	ATGGLNVLYSVK	ATGGLNVLYSVK	2	ATGGLNVLYSVK2	2143.73	5380.58	
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	ATGIDLENIVYYK	ATGIDLENIVYYK	2	ATGIDLENIVYYK2	3682.62		3463.86
D4A929	D4A929	WDR81_RAT	Wdr81	WD repeat-containing protein 81	1	ATGLDSGEGDEGK	ATGLDSGEGDEGK	2	ATGLDSGEGDEGK2	5609.03	6610.52	2625.79
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	ATGLHFR	ATGLHFR	2	ATGLHFR2	23677.6	16115.2	10428
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	ATGNLQEVSGPK	ATGNLQEVSGPK	2	ATGNLQEVSGPK2	152037	130271	134205
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	ATGQPYEQSAK	ATGQPYEQSAK	2	ATGQPYEQSAK2	54765.8	57677.1	50787.9
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	ATGSAVSIFVYDVKPGAEEQTQVAK	ATGSAVSIFVYDVKPGAEEQTQVAK	3	ATGSAVSIFVYDVKPGAEEQTQVAK3	13149.1	19590.4	21763.8
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	ATGTLLYGLASR	ATGTLLYGLASR	2	ATGTLLYGLASR2	40207.6	47160.2	35315.7
Q5RKI8	Q5RKI8	MITOS_RAT	Abcb8	Mitochondrial potassium channel ATP-binding subunit	1	ATGVADEALGSVR	ATGVADEALGSVR	2	ATGVADEALGSVR2	5314.29	4516.56	4126.95
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	ATGVFTTLQPLR	ATGVFTTLQPLR	2	ATGVFTTLQPLR2	9316.38	11009.4	10089.5
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	ATGVFTTLQPLR	ATGVFTTLQPLR	3	ATGVFTTLQPLR3	1.5478e+06	1.75777e+06	1.80839e+06
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	ATGVPSDAPGLHFSSGGWLSTEHGK	ATGVPSDAPGLHFSSGGWLSTEHGK	4	ATGVPSDAPGLHFSSGGWLSTEHGK4	11273.4		5012.94
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	ATGYPLAYVAAK	ATGYPLAYVAAK	2	ATGYPLAYVAAK2	40391.9	54517.4	54714.1
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	ATHDEAINVLR	ATHDEAINVLR	3	ATHDEAINVLR3	14192.9	17826.3	
D3Z7Z5	A0A8I5Y176;D3Z7Z5	D3Z7Z5_RAT	Ranbp10	RAN binding protein 10	0	ATHPIPAACGIYYFEVK	ATHPIPAAC(UniMod:4)GIYYFEVK	3	ATHPIPAAC(UniMod:4)GIYYFEVK3	4262.57	4545.29	2613.87
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	ATHPLPK	ATHPLPK	1	ATHPLPK1			2957.86
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	ATHPLPK	ATHPLPK	2	ATHPLPK2	31924.9		27640.4
G3V965	G3V965	G3V965_RAT	Agpat5	1-acylglycerol-3-phosphate O-acyltransferase 5	1	ATHVAFDSMK	ATHVAFDSMK	2	ATHVAFDSMK2	52297.6	40124.5	47565.2
P0C0S7	A0A8I5ZP51;D4AEC0;P0C0S7;A0A8I6ASE8	H2AZ_RAT	H2az1	Histone H2A.Z	0	ATIAGGGVIPHIHK	ATIAGGGVIPHIHK	2	ATIAGGGVIPHIHK2	3473.81		
P0C0S7	A0A8I5ZP51;D4AEC0;P0C0S7;A0A8I6ASE8	H2AZ_RAT	H2az1	Histone H2A.Z	0	ATIAGGGVIPHIHK	ATIAGGGVIPHIHK	3	ATIAGGGVIPHIHK3	71164.1	5375.55	
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	ATIDQNLEDLR	ATIDQNLEDLR	2	ATIDQNLEDLR2	1.11283e+07	1.25079e+07	1.18134e+07
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	ATIDQNLEDLR	ATIDQNLEDLR	3	ATIDQNLEDLR3	81382.5	102559	82053.1
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	ATIDQNLEDLRSR	ATIDQNLEDLRSR	3	ATIDQNLEDLRSR3	123961	110002	163591
D3ZYR1	D3ZYR1	FCHO2_RAT	Fcho2	F-BAR domain only protein 2	1	ATIEEAYSR	ATIEEAYSR	2	ATIEEAYSR2	77027.7	46964.1	37142.6
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	ATIEIHEK	ATIEIHEK	2	ATIEIHEK2	29576.3	12370.8	22682.6
D3ZRH1	D3ZRH1	D3ZRH1_RAT	Oxa1l	OXA1L, mitochondrial inner membrane protein	1	ATIEMTHYQK	ATIEMTHYQK	3	ATIEMTHYQK3	3594.45		3048.25
B0K019	B0K019	BAG1_RAT	Bag1	BAG family molecular chaperone regulator 1	1	ATIEQFMK	ATIEQFMK	2	ATIEQFMK2	21028.1	13472.4	17780.3
P09527	P09527	RAB7A_RAT	Rab7a	Ras-related protein Rab-7a	1	ATIGADFLTK	ATIGADFLTK	2	ATIGADFLTK2	926878	830369	1.01028e+06
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	ATIGGLLGEK	ATIGGLLGEK	2	ATIGGLLGEK2	52494.9	66257	58657.6
D3ZER6	D3ZER6	D3ZER6_RAT	Tnpo2	Transportin 2	1	ATIGILITTIASK	ATIGILITTIASK	2	ATIGILITTIASK2	27290.8	31935.2	15134.4
Q63483	Q63483	Q63483_RAT	Rab38	Ras-related protein Rab	1	ATIGVDFALK	ATIGVDFALK	2	ATIGVDFALK2	40107.9	43981.4	38476
Q3ZU82	Q3ZU82	GOGA5_RAT	Golga5	Golgin subfamily A member 5	1	ATIIAGTANVK	ATIIAGTANVK	2	ATIIAGTANVK2	11182.4	11208.1	
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	ATIISEQQAK	ATIISEQQAK	2	ATIISEQQAK2	63649.2	69844.1	76145.8
Q6AXS4	Q6AXS4	RENR_RAT	Atp6ap2	Renin receptor	1	ATIMVTVK	ATIMVTVK	2	ATIMVTVK2	4623.47		
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	ATIPLVPNEECQK	ATIPLVPNEEC(UniMod:4)QK	2	ATIPLVPNEEC(UniMod:4)QK2	606801	551481	526450
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	ATIPLVPNEECQKK	ATIPLVPNEEC(UniMod:4)QKK	3	ATIPLVPNEEC(UniMod:4)QKK3	55021	60259.5	61713.1
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	ATIQDVLR	ATIQDVLR	2	ATIQDVLR2	37951.7	42607.8	32820.1
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	ATIQGVLR	ATIQGVLR	2	ATIQGVLR2	123290	75668.6	61610.4
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	ATIQTLLNQPHHGAGIK	ATIQTLLNQPHHGAGIK	2	ATIQTLLNQPHHGAGIK2	1664.44		
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	ATIQTLLNQPHHGAGIK	ATIQTLLNQPHHGAGIK	3	ATIQTLLNQPHHGAGIK3	3074.68	5197.15	2725.41
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	ATIQTLLNQPHHGAGIK	ATIQTLLNQPHHGAGIK	4	ATIQTLLNQPHHGAGIK4	13072	13620.3	9753.34
O35394	O35394	PRAF1_RAT	Rabac1	Prenylated Rab acceptor protein 1	1	ATIRPWGTFVDQQR	ATIRPWGTFVDQQR	3	ATIRPWGTFVDQQR3	22252.4	16422.1	16557.6
F1M8B7	F1M8B7	F1M8B7_RAT	Chmp2b	Charged multivesicular body protein 2B	1	ATISDEEIER	ATISDEEIER	2	ATISDEEIER2	20903.5	22631.9	19876.1
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	ATISHISPDSLYLFR	ATISHISPDSLYLFR	2	ATISHISPDSLYLFR2	74654.1	94516.5	76878.9
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	ATISHISPDSLYLFR	ATISHISPDSLYLFR	3	ATISHISPDSLYLFR3	632954	918493	792468
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	ATISNDGATILK	ATISNDGATILK	2	ATISNDGATILK2	177907	172911	216835
P14270	P14270	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	1	ATITEEAYQK	ATITEEAYQK	2	ATITEEAYQK2	62944	67236.1	65766.9
A0A0G2JZA7	A0A0G2JZA7	A0A0G2JZA7_RAT	Cemip2	hyaluronoglucosaminidase	1	ATITLYGK	ATITLYGK	2	ATITLYGK2	8877.05	3731.43	
D3ZXK7	D3ZXK7	RN123_RAT	Rnf123	E3 ubiquitin-protein ligase RNF123	1	ATIVSVEDWDK	ATIVSVEDWDK	2	ATIVSVEDWDK2	17494.9	26823.7	20299
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	ATIWEPQHMDK	ATIWEPQHMDK	2	ATIWEPQHMDK2	4760.22	4687.51	4587.31
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	ATIWEPQHMDK	ATIWEPQHMDK	3	ATIWEPQHMDK3	41149.3	37654.1	48373.2
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	ATKDPFAPSR	ATKDPFAPSR	2	ATKDPFAPSR2	7260.08	8788.08	4670.96
P13107	P13107;A0A8I5ZZ08	CP2B3_RAT	Cyp2b3	Cytochrome P450 2B3	0	ATLDPNAPR	ATLDPNAPR	2	ATLDPNAPR2	3294.18	15233.7	12390.4
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	ATLEHAHQALEEEK	ATLEHAHQALEEEK	2	ATLEHAHQALEEEK2	6207.53	7963.47	
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	ATLEHAHQALEEEK	ATLEHAHQALEEEK	3	ATLEHAHQALEEEK3	148769	176100	127879
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	ATLEHAHQALEEEK	ATLEHAHQALEEEK	4	ATLEHAHQALEEEK4	31668.2	39955.1	39140
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	ATLEHAHQALEEEKK	ATLEHAHQALEEEKK	3	ATLEHAHQALEEEKK3	26056	19807.8	17539.8
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	ATLEHAHQALEEEKK	ATLEHAHQALEEEKK	4	ATLEHAHQALEEEKK4	31351.5	43950.2	27056.8
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	ATLEHAHQALEEEKKK	ATLEHAHQALEEEKKK	4	ATLEHAHQALEEEKKK4		4973.51	
Q498R7	Q498R7	CZIB_RAT	Czib	CXXC motif containing zinc binding protein	1	ATLENVTNLRPVGEDFR	ATLENVTNLRPVGEDFR	3	ATLENVTNLRPVGEDFR3	4072.57	2784.76	11630.5
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	ATLFPTQVEELLCNLNSILYDTVK	ATLFPTQVEELLC(UniMod:4)NLNSILYDTVK	3	ATLFPTQVEELLC(UniMod:4)NLNSILYDTVK3		3420.51	3008.22
M0R3L8	M0R3L8	M0R3L8_RAT	Gba	Glucosylceramidase	1	ATLGETHR	ATLGETHR	2	ATLGETHR2	8302.25		43234
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	ATLHFDQPNR	ATLHFDQPNR	3	ATLHFDQPNR3	8008.56	6628.66	17064.3
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	ATLHFDQPNRK	ATLHFDQPNRK	3	ATLHFDQPNRK3	23273	41269.8	22423.9
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	ATLIHRLGGEEVSVACK	ATLIHRLGGEEVSVAC(UniMod:4)K	3	ATLIHRLGGEEVSVAC(UniMod:4)K3	11516.1	6551.7	15703.3
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	ATLIHRLGGEEVSVACK	ATLIHRLGGEEVSVAC(UniMod:4)K	4	ATLIHRLGGEEVSVAC(UniMod:4)K4	30281	39494.8	39957.2
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	ATLKDNEYVEK	ATLKDNEYVEK	2	ATLKDNEYVEK2	1392.99	3545.18	3355.29
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	ATLKDNEYVEK	ATLKDNEYVEK	3	ATLKDNEYVEK3	84241.2	72432.7	70173.5
B2RYF7	B2RYF7	WASH1_RAT	Washc1	WASH complex subunit 1	1	ATLLESIR	ATLLESIR	2	ATLLESIR2	63210.9	56804.6	61947.1
A0A8I6A9M7	A0A8I6A9M7;A0A8I6GHU4	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	0	ATLLLESGIR	ATLLLESGIR	2	ATLLLESGIR2	27735.4	38117.3	25755
F1LU27	F1LU27	F1LU27_RAT	Focad	Focadhesin	1	ATLLSLR	ATLLSLR	2	ATLLSLR2	14852.4	13987.1	14250.6
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	ATLLYLLR	ATLLYLLR	2	ATLLYLLR2	1.1185e+06	1.27954e+06	1.21195e+06
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	ATLNAFLHR	ATLNAFLHR	2	ATLNAFLHR2	7575.45	6836.52	2411.63
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	ATLNCETDSLPEPAVTWFK	ATLNC(UniMod:4)ETDSLPEPAVTWFK	3	ATLNC(UniMod:4)ETDSLPEPAVTWFK3		4920.78	2156.19
D3ZDI7	D3ZDI7	D3ZDI7_RAT	Ppp2r5a	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	ATLNELVEYVSTNR	ATLNELVEYVSTNR	3	ATLNELVEYVSTNR3	5767.86	1948.24	7502.51
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	ATLNSGPGAQQK	ATLNSGPGAQQK	2	ATLNSGPGAQQK2	172527	159973	
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	ATLPDADK	ATLPDADK	2	ATLPDADK2	78759.9	107954	158847
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	ATLPDADKER	ATLPDADKER	2	ATLPDADKER2	1.51235e+06	1.25687e+06	1.25802e+06
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	ATLPSPDK	ATLPSPDK	2	ATLPSPDK2	35448.1	8901.1	17003
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	ATLPSPDKLPGFK	ATLPSPDKLPGFK	2	ATLPSPDKLPGFK2	26535.3	29255.8	31302.5
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	ATLPSPDKLPGFK	ATLPSPDKLPGFK	3	ATLPSPDKLPGFK3	367333	328338	322800
Q5PPI8	Q5PPI8	Q5PPI8_RAT	Rmc1	Regulator of MON1-CCZ1	1	ATLPVIATVFDK	ATLPVIATVFDK	2	ATLPVIATVFDK2	20144.6	20208.2	17388.6
B2RZ72	B2RZ72	B2RZ72_RAT	Arpc4	Actin-related protein 2/3 complex subunit 4	1	ATLQAALCLENFSSQVVER	ATLQAALC(UniMod:4)LENFSSQVVER	3	ATLQAALC(UniMod:4)LENFSSQVVER3	57533.8	47922.7	65819.8
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	ATLQYLNGDYEVEPGR	ATLQYLNGDYEVEPGR	2	ATLQYLNGDYEVEPGR2	12306.2	13337.3	13265.5
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	ATLQYLNGDYEVEPGR	ATLQYLNGDYEVEPGR	3	ATLQYLNGDYEVEPGR3	11694.6	12368.7	11207.2
A0A8I6A6W7	A0A8I6AI27;D3ZCD6;A0A8I6AKH5;A0A8I6AJQ0;A0A8I6G2R9;A0A8I6AP43;A0A8I6A6W7;A0A8I6ACU8	A0A8I6A6W7_RAT	ENSRNOG00000070729	Ig-like domain-containing protein	0	ATLTADK	ATLTADK	1	ATLTADK1	21879.4	17320.3	
A0A8I5ZL34	A0A8I5ZL34	A0A8I5ZL34_RAT	LOC100360610	Ig-like domain-containing protein	1	ATLTADTSSNTAYLK	ATLTADTSSNTAYLK	2	ATLTADTSSNTAYLK2	91989.4	65598.3	75924.7
A0A8I6A2J1	A0A8I6A2J1	A0A8I6A2J1_RAT	ENSRNOG00000064886	Ig-like domain-containing protein	1	ATLTADTSSNTAYMQLSQLK	ATLTADTSSNTAYMQLSQLK	3	ATLTADTSSNTAYMQLSQLK3	35517.7	32265.4	29242.6
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	ATLTFFNSAVHNKPSLVR	ATLTFFNSAVHNKPSLVR	3	ATLTFFNSAVHNKPSLVR3	17404.1	13464.2	7997.29
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	ATLTFFNSAVHNKPSLVR	ATLTFFNSAVHNKPSLVR	4	ATLTFFNSAVHNKPSLVR4	59624.3	50956.4	49150.2
D3ZC54	M0R692;D3ZC54;A0A8I5YB87;A0A8I6GB78;Q6P6S0;A0A8I6AIU4;A0A8I6ADW6;A0A8I5Y817;A0A8I6AHX6	D3ZC54_RAT	AABR07065823.2	Ig-like domain-containing protein	0	ATLTVDK	ATLTVDK	1	ATLTVDK1	34105.5	28889.5	20772.8
A0A8I6A4U0	P20767;A0A8I6A4U0;A0A8I5ZZL6	A0A8I6A4U0_RAT	ENSRNOG00000064589	Ig-like domain-containing protein	0	ATLVCLISDFYPSDVEVAWK	ATLVC(UniMod:4)LISDFYPSDVEVAWK	3	ATLVC(UniMod:4)LISDFYPSDVEVAWK3	135357	126026	96414.9
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	ATLVKPTPVNVPISQK	ATLVKPTPVNVPISQK	3	ATLVKPTPVNVPISQK3	27570.4	30861.4	25567.8
Q6AY30	Q6AY30	SCPDL_RAT	Sccpdh	Saccharopine dehydrogenase-like oxidoreductase	1	ATLVLNCVGPYR	ATLVLNC(UniMod:4)VGPYR	2	ATLVLNC(UniMod:4)VGPYR2	72368.4	74117.1	83612.8
P15684	P15684	AMPN_RAT	Anpep	Aminopeptidase N	1	ATLVNEADKLR	ATLVNEADKLR	3	ATLVNEADKLR3	10999.8	8482.26	4909.36
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ATLYALSHAVNSYYAIMDHSR	ATLYALSHAVNSYYAIMDHSR	3	ATLYALSHAVNSYYAIMDHSR3	452968	551882	488831
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ATLYALSHAVNSYYAIMDHSR	ATLYALSHAVNSYYAIMDHSR	4	ATLYALSHAVNSYYAIMDHSR4	15141.6	26846.9	17363.6
Q63009	Q63009;A0A0G2K9I8	ANM1_RAT	Prmt1	Protein arginine N-methyltransferase 1	0	ATLYVTAIEDR	ATLYVTAIEDR	2	ATLYVTAIEDR2	42411.1	32646.9	31830.5
Q6IRJ7	Q6IRJ7	Q6IRJ7_RAT	Anxa7	Annexin	1	ATMEAYSR	ATMEAYSR	2	ATMEAYSR2	102930	104327	110237
Q5RJP5	Q5RJP5	Q5RJP5_RAT	Isg20	Interferon stimulated exonuclease 20	1	ATMELYK	ATMELYK	2	ATMELYK2	70301.2	33374.9	72065.6
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	ATMLIENVEK	ATMLIENVEK	2	ATMLIENVEK2	54810.4	58767.3	55416.1
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	ATMLIENVEKDLTPGLK	ATMLIENVEKDLTPGLK	3	ATMLIENVEKDLTPGLK3	20433.1	16632.1	27728
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	ATMLTDK	ATMLTDK	2	ATMLTDK2	9053.43	10650.7	13853.6
Q9WTV0	Q9WTV0	PREB_RAT	Preb	Prolactin regulatory element-binding protein	1	ATMNLALAGDILAAGQDAQCQLLR	ATMNLALAGDILAAGQDAQC(UniMod:4)QLLR	3	ATMNLALAGDILAAGQDAQC(UniMod:4)QLLR3	4495.23	7206.92	2103.18
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	ATMPTPGNTAAFR	ATMPTPGNTAAFR	2	ATMPTPGNTAAFR2	42857.2	37544.9	42554.6
Q6IFU8	G3V7M3;Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	0	ATMQNLNDR	ATMQNLNDR	2	ATMQNLNDR2	54580.9	31553.5	34851.6
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	ATMQTVR	ATMQTVR	2	ATMQTVR2	253788	310438	302199
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	ATMQTYCDGILQIPAVTPHSTK	ATMQTYC(UniMod:4)DGILQIPAVTPHSTK	3	ATMQTYC(UniMod:4)DGILQIPAVTPHSTK3	34695.7	29904.4	22146.4
A0A8I6GKB1	A0A8I6GKB1	A0A8I6GKB1_RAT	Mocs1	Molybdenum cofactor synthesis 1	1	ATMVDVGGKPETER	ATMVDVGGKPETER	3	ATMVDVGGKPETER3	21612.4	12384.9	16615.8
A0A0G2JUU7	A0A0G2JUU7	A0A0G2JUU7_RAT	Tubgcp3	Gamma-tubulin complex component	1	ATNAQFDSPEILK	ATNAQFDSPEILK	2	ATNAQFDSPEILK2	4980.17		
Q4KM35	Q4KM35	PSB10_RAT	Psmb10	Proteasome subunit beta type-10	1	ATNDSVVADK	ATNDSVVADK	2	ATNDSVVADK2	29222.3	26584.8	1.13097e+06
Q4KM35	Q4KM35	PSB10_RAT	Psmb10	Proteasome subunit beta type-10	1	ATNDSVVADKSCEK	ATNDSVVADKSC(UniMod:4)EK	3	ATNDSVVADKSC(UniMod:4)EK3	3774.19		3027.77
A0A8I6A9G4	A0A8I6A9G4	A0A8I6A9G4_RAT	ENSRNOG00000068610	Ig-like domain-containing protein	1	ATNLADGVPSR	ATNLADGVPSR	2	ATNLADGVPSR2	344474	320051	303812
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	ATNLTVSAVR	ATNLTVSAVR	2	ATNLTVSAVR2	46736.5	42615.5	51172.4
D3Z8E0	D3Z8E0	D3Z8E0_RAT	Rps6ka3	Ribosomal protein S6 kinase	1	ATNMEFAVK	ATNMEFAVK	2	ATNMEFAVK2	5769.57	4018.54	6847.08
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	ATNNSLER	ATNNSLER	2	ATNNSLER2	272729		171907
A0A0G2K0W3	A0A0G2K0W3	A0A0G2K0W3_RAT	Ttyh3	Protein tweety homolog	1	ATNPFQQK	ATNPFQQK	2	ATNPFQQK2	181657	178340	187266
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	ATNPFVNR	ATNPFVNR	2	ATNPFVNR2	54378.6	66262.9	53061.5
A0A8I6AE91	A0A8I6AE91	A0A8I6AE91_RAT	Gga2	Golgi associated, gamma adaptin ear containing, ARF binding protein 2	1	ATNPSMAEQDWSAIQK	ATNPSMAEQDWSAIQK	2	ATNPSMAEQDWSAIQK2	13164.9	10610.2	16566.8
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	ATNVEDVKEEEK	ATNVEDVKEEEK	3	ATNVEDVKEEEK3	25191.3	17677.4	25459.4
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	ATNVEDVKEEEKEAAR	ATNVEDVKEEEKEAAR	3	ATNVEDVKEEEKEAAR3	10125.8	12686.2	7546.62
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	ATNVEDVKEEEKEAAR	ATNVEDVKEEEKEAAR	4	ATNVEDVKEEEKEAAR4	14791.6	21115.7	21923.3
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	ATPANLEEAR	ATPANLEEAR	2	ATPANLEEAR2	766518	982650	776433
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	ATPANLEEARAFVK	ATPANLEEARAFVK	3	ATPANLEEARAFVK3	75354.7	48204.3	103248
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	ATPEIPDIVLK	ATPEIPDIVLK	2	ATPEIPDIVLK2	107714	118126	111794
A0A8I5ZN89	A0A8I5ZN89	A0A8I5ZN89_RAT	Gcdh	Glutaryl-CoA dehydrogenase	1	ATPEMVSLLK	ATPEMVSLLK	2	ATPEMVSLLK2	40019	43282.7	43775.6
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	ATPEPSSTLSSDTVSR	ATPEPSSTLSSDTVSR	2	ATPEPSSTLSSDTVSR2	2.56333e+06	2.14858e+06	2.16584e+06
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	ATPEPSSTLSSDTVSR	ATPEPSSTLSSDTVSR	3	ATPEPSSTLSSDTVSR3	41309.5	37821.9	30771.6
Q5RJP5	Q5RJP5	Q5RJP5_RAT	Isg20	Interferon stimulated exonuclease 20	1	ATPFAEAR	ATPFAEAR	2	ATPFAEAR2	22556.4	37605.9	25833.5
F1M6Q3	F1M6Q3	F1M6Q3_RAT	Col4a2	Collagen type IV alpha 2 chain	1	ATPFIECNGGR	ATPFIEC(UniMod:4)NGGR	2	ATPFIEC(UniMod:4)NGGR2	3774.98	2734.91	
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	ATPICEPWNK	ATPIC(UniMod:4)EPWNK	2	ATPIC(UniMod:4)EPWNK2	119941	132204	129253
F1LYX9	F1LYX9	F1LYX9_RAT	Dsg2	Desmoglein 2	1	ATPIPITVK	ATPIPITVK	1	ATPIPITVK1	800.334	1422.58	
F1LYX9	F1LYX9	F1LYX9_RAT	Dsg2	Desmoglein 2	1	ATPIPITVK	ATPIPITVK	2	ATPIPITVK2	198643	137597	123254
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	ATPLSLCALTAVDQSVLLLKPEAK	ATPLSLC(UniMod:4)ALTAVDQSVLLLKPEAK	3	ATPLSLC(UniMod:4)ALTAVDQSVLLLKPEAK3	12022	7472.88	16704.8
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	ATPLSLCALTAVDQSVLLLKPEAK	ATPLSLC(UniMod:4)ALTAVDQSVLLLKPEAK	4	ATPLSLC(UniMod:4)ALTAVDQSVLLLKPEAK4	368617	315560	324111
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	ATPQASSVPAAEEDVTEIAAAPGAPAR	ATPQASSVPAAEEDVTEIAAAPGAPAR	3	ATPQASSVPAAEEDVTEIAAAPGAPAR3	102302	99791.4	99059.3
D3ZSM9	D3ZSM9	D3ZSM9_RAT	Brat1	BRCA1-associated ATM activator 1	1	ATPQVTQALNVLTTTFGR	ATPQVTQALNVLTTTFGR	2	ATPQVTQALNVLTTTFGR2	8452.06	6078.74	7248.02
Q561Q9	Q561Q9	Q561Q9_RAT	Ctsw	Cathepsin W	1	ATPSTCDPHLVNHSVLLVGFGK	ATPSTC(UniMod:4)DPHLVNHSVLLVGFGK	3	ATPSTC(UniMod:4)DPHLVNHSVLLVGFGK3	12444.4	11798.7	13311.8
Q561Q9	Q561Q9	Q561Q9_RAT	Ctsw	Cathepsin W	1	ATPSTCDPHLVNHSVLLVGFGK	ATPSTC(UniMod:4)DPHLVNHSVLLVGFGK	4	ATPSTC(UniMod:4)DPHLVNHSVLLVGFGK4	23109.4	25011.8	19230
A0A0G2K8K8	A0A0G2K8K8;P20766	A0A0G2K8K8_RAT	Iglc1	Lambda-chain C1-region-like	0	ATPSVTLFPPSSEELK	ATPSVTLFPPSSEELK	2	ATPSVTLFPPSSEELK2	23394	20469.9	9232.27
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	ATPVTSFTNEDLLHGR	ATPVTSFTNEDLLHGR	2	ATPVTSFTNEDLLHGR2	21099.8	22129.1	12079.5
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	ATPVTSFTNEDLLHGR	ATPVTSFTNEDLLHGR	3	ATPVTSFTNEDLLHGR3	140842	181803	184131
A0A8I6AGS3	M0RB63;A0A8I6AGS3	A0A8I6AGS3_RAT	Ndufa3	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3	0	ATPYNYPVPVR	ATPYNYPVPVR	2	ATPYNYPVPVR2	94076.2	104268	85524.9
Q10473	Q10473	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	1	ATPYTFPGGTGQIINK	ATPYTFPGGTGQIINK	2	ATPYTFPGGTGQIINK2	154903	126947	148784
Q6P3V8	Q6P3V8	Q6P3V8_RAT	Eif4a1	ATP-dependent RNA helicase	1	ATQALVLAPTR	ATQALVLAPTR	2	ATQALVLAPTR2	98111.2	59018	55225
F7FL28	F7FL28	F7FL28_RAT	Napsa	Napsin A aspartic peptidase	1	ATQAQFLR	ATQAQFLR	2	ATQAQFLR2	32228.2	31128.4	33760
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	ATQCEDLLSQAK	ATQC(UniMod:4)EDLLSQAK	2	ATQC(UniMod:4)EDLLSQAK2	54600.5	57544.6	48239.2
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	ATQCEDLLSQAK	ATQC(UniMod:4)EDLLSQAK	3	ATQC(UniMod:4)EDLLSQAK3		2543.6	
Q5FVL8	Q5FVL8	Q5FVL8_RAT	Abcb10	ATP binding cassette subfamily B member 10	1	ATQDSLAEATQLAEER	ATQDSLAEATQLAEER	2	ATQDSLAEATQLAEER2	2108.27	5763.68	7468.95
P00884	P00884	ALDOB_RAT	Aldob	Fructose-bisphosphate aldolase B	1	ATQEAFMK	ATQEAFMK	2	ATQEAFMK2		2263.57	
Q66H59	Q66H59	NPL_RAT	Npl	N-acetylneuraminate lyase	1	ATQEFTANAEAK	ATQEFTANAEAK	2	ATQEFTANAEAK2	43941.1	50747.3	44822.3
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	ATQGVSLAGK	ATQGVSLAGK	1	ATQGVSLAGK1	1941.54	2258.96	
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	ATQGVSLAGK	ATQGVSLAGK	2	ATQGVSLAGK2	278882	281541	253740
P52632	P52632	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	1	ATQLLEGLVQELQK	ATQLLEGLVQELQK	2	ATQLLEGLVQELQK2	46553.4	36432.1	48002.3
P52632	P52632	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	1	ATQLLEGLVQELQK	ATQLLEGLVQELQK	3	ATQLLEGLVQELQK3	27113.4	17547.6	44105.2
Q5XIC0	Q5XIC0	ECI2_RAT	Eci2	Enoyl-CoA delta isomerase 2	1	ATQQDFENAMNQVK	ATQQDFENAMNQVK	2	ATQQDFENAMNQVK2	8020.01	7489.06	13046.7
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	ATQQFLVYCEIDGSGNGWTVLQK	ATQQFLVYC(UniMod:4)EIDGSGNGWTVLQK	3	ATQQFLVYC(UniMod:4)EIDGSGNGWTVLQK3	819509	690921	755064
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	ATQQFLVYCEIDGSGNGWTVLQK	ATQQFLVYC(UniMod:4)EIDGSGNGWTVLQK	4	ATQQFLVYC(UniMod:4)EIDGSGNGWTVLQK4	8061.21		4821.48
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	ATQQFLVYCEIDGSGNGWTVLQKR	ATQQFLVYC(UniMod:4)EIDGSGNGWTVLQKR	3	ATQQFLVYC(UniMod:4)EIDGSGNGWTVLQKR3		2682.75	4594.99
P97576	P97576	GRPE1_RAT	Grpel1	GrpE protein homolog 1, mitochondrial	1	ATQSVPKEEVSNNNPHLK	ATQSVPKEEVSNNNPHLK	4	ATQSVPKEEVSNNNPHLK4		3064.91	5237.16
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	ATQTHVDAVYSR	ATQTHVDAVYSR	3	ATQTHVDAVYSR3	8415.42	5314.91	5802.53
A0A8I6ACU6	A0A8I6ACU6	A0A8I6ACU6_RAT	Glcci1	Glucocorticoid induced 1	1	ATQTPSCWAEEGAEK	ATQTPSC(UniMod:4)WAEEGAEK	2	ATQTPSC(UniMod:4)WAEEGAEK2	6846.17	7364.49	7680.82
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	ATQTQIDAVCCR	ATQTQIDAVC(UniMod:4)C(UniMod:4)R	2	ATQTQIDAVC(UniMod:4)C(UniMod:4)R2	28906.2	38524	26698.3
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	ATQTQIDAVCCR	ATQTQIDAVC(UniMod:4)C(UniMod:4)R	3	ATQTQIDAVC(UniMod:4)C(UniMod:4)R3	2838.05		
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	ATQVGEKPPK	ATQVGEKPPK	2	ATQVGEKPPK2			42094.8
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	ATQVGEKPPKDESASQEESEAR	ATQVGEKPPKDESASQEESEAR	4	ATQVGEKPPKDESASQEESEAR4	4959.32	1276.82	5719.35
E9PU37	E9PU37	E9PU37_RAT	Zdhhc13	Palmitoyltransferase	1	ATQYGIFER	ATQYGIFER	2	ATQYGIFER2	31959.9	37045.6	30824.5
B5DF57	B5DF57	B5DF57_RAT	Epb42	protein-glutamine gamma-glutamyltransferase	1	ATQYQPLTASVR	ATQYQPLTASVR	2	ATQYQPLTASVR2	10795.1	15739.4	12566.9
A0A0G2K2R0	A0A0G2K2R0	A0A0G2K2R0_RAT	Frmd4a	FERM domain containing 4A	1	ATSAALPQSQR	ATSAALPQSQR	2	ATSAALPQSQR2	6197.59	4079.03	5263.77
A0A8I6AWZ3	A0A8I6AWZ3	A0A8I6AWZ3_RAT	Agap1	ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	1	ATSACAPISSPK	ATSAC(UniMod:4)APISSPK	2	ATSAC(UniMod:4)APISSPK2	4684.12	5482.39	
Q80Z30	Q80Z30	PPM1E_RAT	Ppm1e	Protein phosphatase 1E	1	ATSDEVLQSDLSAHCIPK	ATSDEVLQSDLSAHC(UniMod:4)IPK	3	ATSDEVLQSDLSAHC(UniMod:4)IPK3	87875.5	108190	97044.4
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	ATSEDSHQLDHINMNLNK	ATSEDSHQLDHINMNLNK	3	ATSEDSHQLDHINMNLNK3	4176.23	1718.05	3981.54
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	ATSEDSHQLDHINMNLNK	ATSEDSHQLDHINMNLNK	4	ATSEDSHQLDHINMNLNK4	4714.01	5897.54	
P20786	P20786	PGFRA_RAT	Pdgfra	Platelet-derived growth factor receptor alpha	1	ATSELNLEMDTR	ATSELNLEMDTR	2	ATSELNLEMDTR2	5571.71	2431.37	
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	ATSETLAADPTPAATIVHFK	ATSETLAADPTPAATIVHFK	3	ATSETLAADPTPAATIVHFK3	11075.4	19207.6	23580.4
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	ATSGLKPVDNGCVAFVLR	ATSGLKPVDNGC(UniMod:4)VAFVLR	3	ATSGLKPVDNGC(UniMod:4)VAFVLR3	8568.55	5679.11	6741.16
O08628	O08628	PCOC1_RAT	Pcolce	Procollagen C-endopeptidase enhancer 1	1	ATSGTEHQFCGGR	ATSGTEHQFC(UniMod:4)GGR	3	ATSGTEHQFC(UniMod:4)GGR3	20118.3	21298.7	19049.4
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	ATSHICEVEKEIALLK	ATSHIC(UniMod:4)EVEKEIALLK	3	ATSHIC(UniMod:4)EVEKEIALLK3	17547.7	9203.49	7427.34
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	ATSHICEVEKEIALLK	ATSHIC(UniMod:4)EVEKEIALLK	4	ATSHIC(UniMod:4)EVEKEIALLK4	11251.5	16155.1	25716.5
Q9JK25	Q9JK25	CLIP1_RAT	Clip1	CAP-Gly domain-containing linker protein 1	1	ATSHVGEIEQELALAR	ATSHVGEIEQELALAR	3	ATSHVGEIEQELALAR3		2642.31	3871.69
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	ATSILGYLSDSELQGPR	ATSILGYLSDSELQGPR	2	ATSILGYLSDSELQGPR2	58030.9	64848.3	60603.7
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	ATSILGYLSDSELQGPR	ATSILGYLSDSELQGPR	3	ATSILGYLSDSELQGPR3	20305.2	32211.6	28798.1
Q9QUR2	Q9QUR2	DCTN4_RAT	Dctn4	Dynactin subunit 4	1	ATSISTQLPDDPAK	ATSISTQLPDDPAK	2	ATSISTQLPDDPAK2	64478.7	51211.7	70448.7
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	ATSLLLEILGLLCK	ATSLLLEILGLLC(UniMod:4)K	3	ATSLLLEILGLLC(UniMod:4)K3	4047.11		
A0A8I6A5X2	A0A8I6A5X2	A0A8I6A5X2_RAT	Usp32	ubiquitinyl hydrolase 1	1	ATSLTLEGGR	ATSLTLEGGR	2	ATSLTLEGGR2	7209.62	9732.81	7711.17
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	ATSNLTQEHMPTLFVESVLEVHGK	ATSNLTQEHMPTLFVESVLEVHGK	4	ATSNLTQEHMPTLFVESVLEVHGK4	9588.77	11179.2	6769.53
P13832	P13832;P18666	MRLCA_RAT	Rlc-a	Myosin regulatory light chain RLC-A	0	ATSNVFAMFDQSQIQEFK	ATSNVFAMFDQSQIQEFK	3	ATSNVFAMFDQSQIQEFK3	26631	28293.9	47824.3
Q6AYK3	Q6AYK3	INO1_RAT	Isyna1	Inositol-3-phosphate synthase 1	1	ATSPLPCK	ATSPLPC(UniMod:4)K	2	ATSPLPC(UniMod:4)K2	325415	509784	403975
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	ATSPSTLVSTGSSSR	ATSPSTLVSTGSSSR	2	ATSPSTLVSTGSSSR2	27919.4	31859.4	25883.5
B2RYF7	B2RYF7	WASH1_RAT	Washc1	WASH complex subunit 1	1	ATSQGGDLMSDLFNK	ATSQGGDLMSDLFNK	2	ATSQGGDLMSDLFNK2	6111.58	6238.26	6764.09
P08934	P08932;A0A0G2KA54;P08934	KNG1_RAT	Kng1	Kininogen-1	0	ATSQVVAGTK	ATSQVVAGTK	1	ATSQVVAGTK1	304865	298177	278179
P08934	P08932;A0A0G2KA54;P08934	KNG1_RAT	Kng1	Kininogen-1	0	ATSQVVAGTK	ATSQVVAGTK	2	ATSQVVAGTK2	61895.9	2.20389e+07	44151.7
P08934	P08932;A0A0G2KA54;P08934	KNG1_RAT	Kng1	Kininogen-1	0	ATSQVVAGTKYVIEFIAR	ATSQVVAGTKYVIEFIAR	3	ATSQVVAGTKYVIEFIAR3		3872.71	4640.45
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	ATSQVVAGTKYVIEFIARETK	ATSQVVAGTKYVIEFIARETK	4	ATSQVVAGTKYVIEFIARETK4	40161.8	7050.6	13821.2
P01048	P01048	KNT1_RAT	Map1	T-kininogen 1	1	ATSQVVAGVIYVIEFIAR	ATSQVVAGVIYVIEFIAR	3	ATSQVVAGVIYVIEFIAR3	3200.72	56887.7	87864.2
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	ATSRPGCSVDLGGFAGLFDLK	ATSRPGC(UniMod:4)SVDLGGFAGLFDLK	3	ATSRPGC(UniMod:4)SVDLGGFAGLFDLK3	8717.43	12895.4	
A0A8I6AHD0	A0A8I6AHD0	A0A8I6AHD0_RAT	Bri3bp	Bri3 binding protein	1	ATSSFSQSVSSLFGEDNVR	ATSSFSQSVSSLFGEDNVR	3	ATSSFSQSVSSLFGEDNVR3	15027	8096.44	17667.4
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	ATSVYLVQK	ATSVYLVQK	2	ATSVYLVQK2	71230.4	75012.5	66645.3
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	ATTADGSSILDR	ATTADGSSILDR	2	ATTADGSSILDR2	47404.1	50950.4	46638.1
Q99PD4	Q99PD4	ARC1A_RAT	Arpc1a	Actin-related protein 2/3 complex subunit 1A	1	ATTEDRNTALETLHQNSITQVSIYEVDK	ATTEDRNTALETLHQNSITQVSIYEVDK	4	ATTEDRNTALETLHQNSITQVSIYEVDK4	4613.84	1374.49	5500.72
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	ATTEEPETDEVDQVSESNSIEELER	ATTEEPETDEVDQVSESNSIEELER	3	ATTEEPETDEVDQVSESNSIEELER3	3827.96	3022.41	7774.49
F1M1D2	F1M1D2	F1M1D2_RAT	Tab3	TGF-beta activated kinase 1/MAP3K7 binding protein 3	1	ATTENLLNLVDQEER	ATTENLLNLVDQEER	2	ATTENLLNLVDQEER2	2618.93	5006.71	925.298
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	ATTGAQVSNLGMENVPLSSTNK	ATTGAQVSNLGMENVPLSSTNK	3	ATTGAQVSNLGMENVPLSSTNK3	11560.2	9547.8	9599.88
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	ATTGAQVSNLGMENVPLSSTNKK	ATTGAQVSNLGMENVPLSSTNKK	3	ATTGAQVSNLGMENVPLSSTNKK3	20830.9	26809.9	13862.1
O55012	O55012	PICAL_RAT	Picalm	Phosphatidylinositol-binding clathrin assembly protein	1	ATTHEIMGPK	ATTHEIMGPK	2	ATTHEIMGPK2	4301.74	5175.39	
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	ATTLASTLMEQYMK	ATTLASTLMEQYMK	2	ATTLASTLMEQYMK2	8744.84	6224.45	10459.1
O55012	O55012	PICAL_RAT	Picalm	Phosphatidylinositol-binding clathrin assembly protein	1	ATTLSNAVSSLASTGLSLTK	ATTLSNAVSSLASTGLSLTK	2	ATTLSNAVSSLASTGLSLTK2	28717.2	13732.2	25575.7
O55012	O55012	PICAL_RAT	Picalm	Phosphatidylinositol-binding clathrin assembly protein	1	ATTLSNAVSSLASTGLSLTK	ATTLSNAVSSLASTGLSLTK	3	ATTLSNAVSSLASTGLSLTK3	6498.18	12359.7	
Q9QX79	Q9QX79	FETUB_RAT	Fetub	Fetuin-B	1	ATTQWVVGPSYFVEYLIK	ATTQWVVGPSYFVEYLIK	3	ATTQWVVGPSYFVEYLIK3	20628.9	5036.87	
Q642G4	Q642G4	PEX14_RAT	Pex14	Peroxisomal membrane protein PEX14	1	ATTSTNWILESQNINELK	ATTSTNWILESQNINELK	3	ATTSTNWILESQNINELK3	2951.41		3243.3
Q5BK26	M0R715;Q5BK26	PLPL7_RAT	Pnpla7	Patatin-like phospholipase domain-containing protein 7	0	ATTVHAVR	ATTVHAVR	2	ATTVHAVR2			12134.4
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	ATTYIDPR	ATTYIDPR	2	ATTYIDPR2	33714.1	32719.7	26264
Q792I0	Q792I0;Q9Z250	LIN7C_RAT	Lin7c	Protein lin-7 homolog C	0	ATVAAFAASEGHSHPR	ATVAAFAASEGHSHPR	3	ATVAAFAASEGHSHPR3	26844.9	24495.2	24517.7
Q792I0	Q792I0;Q9Z250	LIN7C_RAT	Lin7c	Protein lin-7 homolog C	0	ATVAAFAASEGHSHPR	ATVAAFAASEGHSHPR	4	ATVAAFAASEGHSHPR4	33389.1	34590.8	30793.8
A0A0G2K6N9	A0A0G2K6N9	A0A0G2K6N9_RAT	Commd4	COMM domain containing 4	1	ATVAVLSFILSSAAK	ATVAVLSFILSSAAK	2	ATVAVLSFILSSAAK2	1738.24		964.99
B2RYG8	B2RYG8	ELP6_RAT	Elp6	Elongator complex protein 6	1	ATVCCELK	ATVC(UniMod:4)C(UniMod:4)ELK	2	ATVC(UniMod:4)C(UniMod:4)ELK2		14721.3	6485.2
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ATVDMLQAEGGR	ATVDMLQAEGGR	2	ATVDMLQAEGGR2	23335.7	44639.9	41637.9
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	ATVEDEK	ATVEDEK	1	ATVEDEK1			10466.1
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	ATVEDEK	ATVEDEK	2	ATVEDEK2			30402.4
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	ATVEQLMFEEK	ATVEQLMFEEK	2	ATVEQLMFEEK2	16947.2	22348.7	17243.3
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	ATVFLAMGK	ATVFLAMGK	2	ATVFLAMGK2	69903.6	63447.2	64461.4
D3Z9L0	D3Z9L0	D3Z9L0_RAT	Agk	Acylglycerol kinase, mitochondrial	1	ATVFLNPAACK	ATVFLNPAAC(UniMod:4)K	2	ATVFLNPAAC(UniMod:4)K2	14785.1	23573	21333.7
D3ZUV3	D3ZUV3	D3ZUV3_RAT	Eif2a	Eukaryotic translation initiation factor 2A	1	ATVFNLK	ATVFNLK	2	ATVFNLK2	13126.6	8840.28	6241.12
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	ATVFPEIIQSHALK	ATVFPEIIQSHALK	3	ATVFPEIIQSHALK3	19454.5	25701.3	34321.1
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	ATVGILITTIASK	ATVGILITTIASK	2	ATVGILITTIASK2	32825.4	39754.1	31650.2
F1MAD3	F1MAD3	F1MAD3_RAT	Pkd1	Polycystin 1, transient receptor potential channel interacting	1	ATVGNSISR	ATVGNSISR	2	ATVGNSISR2	3876.5	4608.62	9708.4
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	ATVGSLLGEK	ATVGSLLGEK	2	ATVGSLLGEK2	7186.84	11201.8	
Q7TP21	Q7TP21	Q7TP21_RAT	Rpa1	Replication protein A subunit	1	ATVIDVKPVDYR	ATVIDVKPVDYR	3	ATVIDVKPVDYR3	12690.7	14336.1	3375.83
B5DEI0	B5DEI0	B5DEI0_RAT	Pcyox1l	Pcyox1l protein	1	ATVIHATVTSVTLHSTEGK	ATVIHATVTSVTLHSTEGK	4	ATVIHATVTSVTLHSTEGK4	12888.2	23734.9	14568.7
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	ATVIVMVTR	ATVIVMVTR	2	ATVIVMVTR2	103400	83246.7	84264.9
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	ATVLASSYDTAWK	ATVLASSYDTAWK	2	ATVLASSYDTAWK2	3565.37		10037.7
Q5RJR8	Q5RJR8	LRC59_RAT	Lrrc59	Leucine-rich repeat-containing protein 59	1	ATVLDLSCNK	ATVLDLSC(UniMod:4)NK	2	ATVLDLSC(UniMod:4)NK2	205557	219089	232030
Q4FZT0	Q4FZT0	STML2_RAT	Stoml2	Stomatin-like protein 2, mitochondrial	1	ATVLESEGTR	ATVLESEGTR	2	ATVLESEGTR2	21784.4	20231.5	22806.5
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	ATVLGDVSSLR	ATVLGDVSSLR	2	ATVLGDVSSLR2	23861.2	24644.9	26733.7
Q9JID1	Q9JID1	PDCD4_RAT	Pdcd4	Programmed cell death protein 4	1	ATVLLSMSK	ATVLLSMSK	2	ATVLLSMSK2	9250	17556.4	11894
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	ATVLNYLPTCIR	ATVLNYLPTC(UniMod:4)IR	2	ATVLNYLPTC(UniMod:4)IR2	6306.05	8760.58	3731.24
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	ATVLNYMPHCIR	ATVLNYMPHC(UniMod:4)IR	2	ATVLNYMPHC(UniMod:4)IR2	268919	208346	179520
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	ATVLNYMPHCIR	ATVLNYMPHC(UniMod:4)IR	3	ATVLNYMPHC(UniMod:4)IR3	2.74522e+06	2.40327e+06	2.4234e+06
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	ATVLQNQLDESQQER	ATVLQNQLDESQQER	2	ATVLQNQLDESQQER2	11387.2	11577.6	14282.6
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	ATVLQNQLDESQQER	ATVLQNQLDESQQER	3	ATVLQNQLDESQQER3	15891.2	12210.8	11004.7
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	ATVLQNQLDESQQERNDLMQLK	ATVLQNQLDESQQERNDLMQLK	3	ATVLQNQLDESQQERNDLMQLK3	1605.41	6800.36	8480.04
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	ATVLYQGQR	ATVLYQGQR	2	ATVLYQGQR2	4.50281e+06	4.50629e+06	5.21317e+06
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	ATVMLYDDSNK	ATVMLYDDSNK	2	ATVMLYDDSNK2	163855	145622	161407
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	ATVMLYDDSNKR	ATVMLYDDSNKR	2	ATVMLYDDSNKR2	83637.1	79333.7	55009.5
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	ATVMLYDDSNKR	ATVMLYDDSNKR	3	ATVMLYDDSNKR3	446243	413154	404465
O08658	O08658	NUP88_RAT	Nup88	Nuclear pore complex protein Nup88	1	ATVNCSTIPIAER	ATVNC(UniMod:4)STIPIAER	2	ATVNC(UniMod:4)STIPIAER2	8174.6	3528.91	3560.39
B2RZ37	B2RZ37	REEP5_RAT	Reep5	Receptor expression-enhancing protein 5	1	ATVNLLGDEK	ATVNLLGDEK	2	ATVNLLGDEK2	355611	317284	271715
B2RZ37	B2RZ37	REEP5_RAT	Reep5	Receptor expression-enhancing protein 5	1	ATVNLLGDEKK	ATVNLLGDEKK	2	ATVNLLGDEKK2		7015.98	12451.4
B2RZ37	B2RZ37	REEP5_RAT	Reep5	Receptor expression-enhancing protein 5	1	ATVNLLGDEKK	ATVNLLGDEKK	3	ATVNLLGDEKK3	74277.5	107963	107818
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	ATVPIYATGVLTCYIQEEDRK	ATVPIYATGVLTC(UniMod:4)YIQEEDRK	3	ATVPIYATGVLTC(UniMod:4)YIQEEDRK3	21672.5	24145.1	42573.4
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	ATVPLQSNVIEASPDMK	ATVPLQSNVIEASPDMK	2	ATVPLQSNVIEASPDMK2	15807.9	19646.5	16795.3
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	ATVPRPAPYSK	ATVPRPAPYSK	3	ATVPRPAPYSK3	25553	48197.4	36435.3
A0A8I6ACU6	A0A8I6ACU6	A0A8I6ACU6_RAT	Glcci1	Glucocorticoid induced 1	1	ATVPYQLLR	ATVPYQLLR	2	ATVPYQLLR2	25706	19406.5	35312.9
P70645	P70645	BLMH_RAT	Blmh	Bleomycin hydrolase	1	ATVQGAQHVFQHVVPQEGKPVTNQK	ATVQGAQHVFQHVVPQEGKPVTNQK	4	ATVQGAQHVFQHVVPQEGKPVTNQK4	16948.1	18988.8	9486.54
Q01827	Q01827	VMAT2_RAT	Slc18a2	Synaptic vesicular amine transporter	1	ATVQLLTNPFIGLLTNR	ATVQLLTNPFIGLLTNR	2	ATVQLLTNPFIGLLTNR2	3612.64	4744.03	4381.54
Q01827	Q01827	VMAT2_RAT	Slc18a2	Synaptic vesicular amine transporter	1	ATVQLLTNPFIGLLTNR	ATVQLLTNPFIGLLTNR	3	ATVQLLTNPFIGLLTNR3	5313.67	4153.27	
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	ATVQPLPQATGPSNQPSLLASVSQPK	ATVQPLPQATGPSNQPSLLASVSQPK	3	ATVQPLPQATGPSNQPSLLASVSQPK3	23727.7	19946.7	24083.5
Q8VHE9	Q8VHE9	RETST_RAT	Retsat	All-trans-retinol 13,14-reductase	1	ATVQSVLLDSAGR	ATVQSVLLDSAGR	2	ATVQSVLLDSAGR2	29953.7	27271.9	30112.3
P30427	P30427	PLEC_RAT	Plec	Plectin	1	ATVSAPFGK	ATVSAPFGK	2	ATVSAPFGK2		3363.81	7939.59
G3V619	G3V619	G3V619_RAT	Ascc1	Activating signal cointegrator 1 complex subunit 1	1	ATVSAPSLLYK	ATVSAPSLLYK	2	ATVSAPSLLYK2	33469.3	27877.1	38319.2
D3ZX21	D3ZX21	D3ZX21_RAT	Ap4e1	AP-4 complex subunit epsilon	1	ATVSAPTTTLK	ATVSAPTTTLK	2	ATVSAPTTTLK2	8014.78	7831.39	3371.42
P11517	P11517	HBB2_RAT		Hemoglobin subunit beta-2	1	ATVSGLWGK	ATVSGLWGK	1	ATVSGLWGK1	2130.71	2686.45	4808.4
P11517	P11517	HBB2_RAT		Hemoglobin subunit beta-2	1	ATVSGLWGK	ATVSGLWGK	2	ATVSGLWGK2	594935	552167	593968
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	ATVSPSTDETPAGTLPGGSFSHSALSVDR	ATVSPSTDETPAGTLPGGSFSHSALSVDR	3	ATVSPSTDETPAGTLPGGSFSHSALSVDR3	2856.99	2648.95	4030.91
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	ATVSPSTDETPAGTLPGGSFSHSALSVDRK	ATVSPSTDETPAGTLPGGSFSHSALSVDRK	4	ATVSPSTDETPAGTLPGGSFSHSALSVDRK4	23181.1	24094.7	24586
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	ATVTDSCEEVEPSLLEILPK	ATVTDSC(UniMod:4)EEVEPSLLEILPK	3	ATVTDSC(UniMod:4)EEVEPSLLEILPK3	15018.4	14591.3	19165.5
B0BN31	B0BN31	B0BN31_RAT	Cep20	Centrosomal protein 20	1	ATVTELK	ATVTELK	1	ATVTELK1	12771.3	8443.62	8445.71
Q05028	Q05028	PDGFB_RAT	Pdgfb	Platelet-derived growth factor subunit B (Fragment)	1	ATVTLEDHLACK	ATVTLEDHLAC(UniMod:4)K	3	ATVTLEDHLAC(UniMod:4)K3	22190.7	18814.5	21739.8
A0A0U1RS29	A0A0U1RS29	A0A0U1RS29_RAT	Rgl2	Ral guanine nucleotide dissociation stimulator-like 2	1	ATVTQFNK	ATVTQFNK	2	ATVTQFNK2	13345.8	17361.3	16905.7
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	ATVTSMSGDLK	ATVTSMSGDLK	2	ATVTSMSGDLK2	18571.1		20857.4
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	ATVTTEVVNLSNR	ATVTTEVVNLSNR	3	ATVTTEVVNLSNR3		7844.79	1889.91
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	ATVTVNTSDLGNK	ATVTVNTSDLGNK	2	ATVTVNTSDLGNK2	16956.5	23460.1	22190.1
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	ATVTVNTSDLGNKK	ATVTVNTSDLGNKK	3	ATVTVNTSDLGNKK3	37884.2	35754.7	33323.1
P61983	P61983	1433G_RAT	Ywhag	14-3-3 protein gamma	1	ATVVESSEK	ATVVESSEK	1	ATVVESSEK1	18867	8764.54	15407.3
P61983	P61983	1433G_RAT	Ywhag	14-3-3 protein gamma	1	ATVVESSEK	ATVVESSEK	2	ATVVESSEK2	998593	883053	940265
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	ATVVWEVADETHPLEGGR	ATVVWEVADETHPLEGGR	3	ATVVWEVADETHPLEGGR3	25446.1	31893.3	33908
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	ATVWDLR	ATVWDLR	2	ATVWDLR2	113489	122543	115472
A0A8I5ZZ05	A0A8I5ZZ05	A0A8I5ZZ05_RAT	Soga1	Suppressor of glucose, autophagy associated 1	1	ATWETER	ATWETER	2	ATWETER2	5075.26	3917.2	9563.77
O70377	O70377	SNP23_RAT	Snap23	Synaptosomal-associated protein 23	1	ATWGDGGDSSPSNVVSK	ATWGDGGDSSPSNVVSK	2	ATWGDGGDSSPSNVVSK2	112109	130427	138332
O70377	O70377	SNP23_RAT	Snap23	Synaptosomal-associated protein 23	1	ATWGDGGDSSPSNVVSK	ATWGDGGDSSPSNVVSK	3	ATWGDGGDSSPSNVVSK3	26036.5	23665.5	37837
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	ATWIGASGDQTFLR	ATWIGASGDQTFLR	2	ATWIGASGDQTFLR2	18382.4		35686.7
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	ATWPVWR	ATWPVWR	2	ATWPVWR2	56579.8	70902.6	75581.2
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	ATYDIEVNTR	ATYDIEVNTR	2	ATYDIEVNTR2	14825.7	15346.5	15318.8
E9PSP1	E9PSP1	E9PSP1_RAT	Pltp	Phospholipid transfer protein	1	ATYFGSIVLQSPTVINSPLK	ATYFGSIVLQSPTVINSPLK	3	ATYFGSIVLQSPTVINSPLK3	27343.3	25297.3	28048.5
F7FBG3	F7FBG3	F7FBG3_RAT	Commd7	COMM domain containing 7	1	ATYFSEK	ATYFSEK	2	ATYFSEK2	20330.2	12289.4	19774.8
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	ATYGNVVR	ATYGNVVR	2	ATYGNVVR2	31684.2	41756.9	34244.3
F1LMI3	F1LMI3	F1LMI3_RAT	Cdh3	Cadherin 3	1	ATYHIVGGDDGDHFTVATHPETNQGILTTK	ATYHIVGGDDGDHFTVATHPETNQGILTTK	4	ATYHIVGGDDGDHFTVATHPETNQGILTTK4	5522.98	1961.75	7067.56
A0A8I6A5Y0	A0A8I6A5Y0	A0A8I6A5Y0_RAT	Vta1	Vesicle trafficking 1	1	ATYIHNCLK	ATYIHNC(UniMod:4)LK	2	ATYIHNC(UniMod:4)LK2	4440.25	4002.42	
Q8VIL3	Q8VIL3	ZWINT_RAT	Zwint	ZW10 interactor	1	ATYMDHVDVIK	ATYMDHVDVIK	2	ATYMDHVDVIK2	3235.19	1244.65	
Q8VIL3	Q8VIL3	ZWINT_RAT	Zwint	ZW10 interactor	1	ATYMDHVDVIK	ATYMDHVDVIK	3	ATYMDHVDVIK3	83751	93490.8	95323.1
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	ATYSTNCPVWEEAFR	ATYSTNC(UniMod:4)PVWEEAFR	2	ATYSTNC(UniMod:4)PVWEEAFR2	318538	324077	331075
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	ATYSTNCPVWEEAFR	ATYSTNC(UniMod:4)PVWEEAFR	3	ATYSTNC(UniMod:4)PVWEEAFR3	55211.3	53778.1	67752.2
A0A8I6GL39	A0A8I6GL39	A0A8I6GL39_RAT	Scamp2	Secretory carrier-associated membrane protein	1	AVAAAAQAGLLR	AVAAAAQAGLLR	2	AVAAAAQAGLLR2		4521.95	
Q9R1J8	Q9R1J8	P3H1_RAT	P3h1	Prolyl 3-hydroxylase 1	1	AVAAAHTFFVGNPEHMEMR	AVAAAHTFFVGNPEHMEMR	4	AVAAAHTFFVGNPEHMEMR4	4010.36	4516.19	7524.64
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	AVAAGNSCR	AVAAGNSC(UniMod:4)R	1	AVAAGNSC(UniMod:4)R1			5321.46
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	AVAAGNSCR	AVAAGNSC(UniMod:4)R	2	AVAAGNSC(UniMod:4)R2			7871.04
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	AVAAGNSCRQEDVIATANLSR	AVAAGNSC(UniMod:4)RQEDVIATANLSR	3	AVAAGNSC(UniMod:4)RQEDVIATANLSR3	5238.43		3960.25
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	AVAAIAGGLVDAEALVALK	AVAAIAGGLVDAEALVALK	2	AVAAIAGGLVDAEALVALK2	22893	17251.6	12408.7
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	AVAAIAGGLVDAEALVALK	AVAAIAGGLVDAEALVALK	3	AVAAIAGGLVDAEALVALK3	7249.33	5386.16	8721.25
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	AVAALLTIPEAEK	AVAALLTIPEAEK	2	AVAALLTIPEAEK2	249528	277409	237248
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	AVAALLTIPEAEK	AVAALLTIPEAEK	3	AVAALLTIPEAEK3	16248.8	15778.8	19723.5
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	AVAALMTNPEVR	AVAALMTNPEVR	2	AVAALMTNPEVR2	47018.4	59048.5	46859.3
Q63016	Q63016	LAT1_RAT	Slc7a5	Large neutral amino acids transporter small subunit 1	1	AVAAPATTAAEEER	AVAAPATTAAEEER	2	AVAAPATTAAEEER2	178400	190387	180563
Q63016	Q63016	LAT1_RAT	Slc7a5	Large neutral amino acids transporter small subunit 1	1	AVAAPATTAAEEER	AVAAPATTAAEEER	3	AVAAPATTAAEEER3	4155.99	3741.72	5731.95
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	AVADALETGEEDAVTEALR	AVADALETGEEDAVTEALR	3	AVADALETGEEDAVTEALR3	17162.7	18759.8	17426.6
Q9EQV9	Q9EQV9	CBPB2_RAT	Cpb2	Carboxypeptidase B2	1	AVADFLR	AVADFLR	2	AVADFLR2	215250	212490	222894
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	AVADYVR	AVADYVR	2	AVADYVR2	190675	217227	217418
Q5M9G9	Q5M9G9	FAKD4_RAT	Tbrg4	FAST kinase domain-containing protein 4	1	AVAEELAK	AVAEELAK	2	AVAEELAK2	33429.9	44314.4	32287.4
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	AVAEEPPGLR	AVAEEPPGLR	2	AVAEEPPGLR2	92743.1	100876	90316.3
A0A8I5ZSB0	A0A8I5ZSB0	A0A8I5ZSB0_RAT	Igtp	Interferon gamma induced GTPase	1	AVAEGDLQK	AVAEGDLQK	2	AVAEGDLQK2	41920.4	39267.4	30131.1
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	AVAELENVK	AVAELENVK	2	AVAELENVK2	20339.4	22388.3	26571.4
P11960	P11960	ODBA_RAT	Bckdha	2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment)	1	AVAENQPFLIEAMTYR	AVAENQPFLIEAMTYR	2	AVAENQPFLIEAMTYR2	12632.3	11608.4	12459.5
P49744	P35444;P49744	TSP4_RAT	Thbs4	Thrombospondin-4	0	AVAEPGIQLK	AVAEPGIQLK	2	AVAEPGIQLK2	1.13882e+07	1.28877e+07	1.26967e+07
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AVAEQIPLLVQGVR	AVAEQIPLLVQGVR	2	AVAEQIPLLVQGVR2	5.29856e+06	5.20596e+06	5.07375e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AVAEQIPLLVQGVR	AVAEQIPLLVQGVR	3	AVAEQIPLLVQGVR3	675971	651281	680535
F1M7Q7	F1M7Q7	F1M7Q7_RAT	Otud4	ubiquitinyl hydrolase 1	1	AVAEQVLHSQSR	AVAEQVLHSQSR	3	AVAEQVLHSQSR3	21437.4	11054.7	18948.7
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	AVAEVEEMCNILSMEGVTVK	AVAEVEEMC(UniMod:4)NILSMEGVTVK	3	AVAEVEEMC(UniMod:4)NILSMEGVTVK3	26800	27762.6	48209.3
O35964	O35964	SH3G1_RAT	Sh3gl1	Endophilin-A2	1	AVAEVLVR	AVAEVLVR	2	AVAEVLVR2	262273	272082	221458
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	AVAEVSESTK	AVAEVSESTK	2	AVAEVSESTK2	99368.9	138597	90935
G3V9M3	G3V9M3	G3V9M3_RAT	Wdr47	WD repeat domain 47	1	AVAFHPSGSLYAVGSNSK	AVAFHPSGSLYAVGSNSK	3	AVAFHPSGSLYAVGSNSK3		9599.8	5697.71
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	AVAFQNPQTR	AVAFQNPQTR	2	AVAFQNPQTR2	263142	234072	253514
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	AVAGDASESALLK	AVAGDASESALLK	2	AVAGDASESALLK2	93860.3	83922.5	98513.2
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	AVAGNISDPGLQK	AVAGNISDPGLQK	2	AVAGNISDPGLQK2	1.86012e+06	1.67877e+06	1.64891e+06
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	AVAGNISDPGLQK	AVAGNISDPGLQK	3	AVAGNISDPGLQK3	10540.2	9266.43	14680.2
Q62818	Q62818	EI2BB_RAT	Eif2b2	Translation initiation factor eIF-2B subunit beta	1	AVAGTHTLALAAK	AVAGTHTLALAAK	3	AVAGTHTLALAAK3	25468.7	32271	30843.3
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	AVAHHTDCTFIR	AVAHHTDC(UniMod:4)TFIR	2	AVAHHTDC(UniMod:4)TFIR2	1163.73	4883.9	1609.77
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	AVAHHTDCTFIR	AVAHHTDC(UniMod:4)TFIR	3	AVAHHTDC(UniMod:4)TFIR3	124631	94915	113780
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	AVAHHTTAAFIR	AVAHHTTAAFIR	2	AVAHHTTAAFIR2	7993.89	3501.77	6394.86
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	AVAHHTTAAFIR	AVAHHTTAAFIR	3	AVAHHTTAAFIR3	89495.6	59173.2	83112.9
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	AVAHILGIR	AVAHILGIR	2	AVAHILGIR2	6174.44	5197.24	3161.14
Q6DGG1	Q6DGG1	ABHEB_RAT	Abhd14b	Putative protein-lysine deacylase ABHD14B	1	AVAIDLPGLGR	AVAIDLPGLGR	2	AVAIDLPGLGR2	3983.1	2135.1	2058.01
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	AVALDSDNISLK	AVALDSDNISLK	2	AVALDSDNISLK2	43134.7	37430.5	29617
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	AVALDTYEK	AVALDTYEK	2	AVALDTYEK2	48725.2	43315.3	52859.1
Q6PCT8	Q6PCT8	DHSD_RAT	Sdhd	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial	1	AVAMLWK	AVAMLWK	2	AVAMLWK2	64527.9	59924.3	45603.1
A0A8I6AGG9	A0A8I6AGG9	A0A8I6AGG9_RAT	Chchd3	Coiled-coil-helix-coiled-coil-helix domain containing 3	1	AVANEQLTR	AVANEQLTR	2	AVANEQLTR2	152186	58063.8	76207.3
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	AVANETGAFFFLINGPEIMSK	AVANETGAFFFLINGPEIMSK	3	AVANETGAFFFLINGPEIMSK3	123395	111100	149918
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	AVANQTSATFLR	AVANQTSATFLR	2	AVANQTSATFLR2	44793.9	76613.1	73666.4
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	AVANYDSVEAGEK	AVANYDSVEAGEK	2	AVANYDSVEAGEK2	83845.5	91323.4	81724.5
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	AVAPGGATR	AVAPGGATR	2	AVAPGGATR2			61371.8
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	AVAQALEVIPR	AVAQALEVIPR	2	AVAQALEVIPR2	423289	502566	556467
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	AVAQALEVIPR	AVAQALEVIPR	3	AVAQALEVIPR3	24924.1	26234	37608.6
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	AVAQGNLSSADVQAAK	AVAQGNLSSADVQAAK	2	AVAQGNLSSADVQAAK2	262584	255118	251009
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	AVAQGNLSSADVQAAK	AVAQGNLSSADVQAAK	3	AVAQGNLSSADVQAAK3	6660.65	13297	11107.1
Q7TS56	Q7TS56	CBR4_RAT	Cbr4	3-oxoacyl-[acyl-carrier-protein] reductase	1	AVAQLMAQK	AVAQLMAQK	2	AVAQLMAQK2	9742.51	8614.65	9360.7
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	AVAQLTYCSLCPPDDLATR	AVAQLTYC(UniMod:4)SLC(UniMod:4)PPDDLATR	3	AVAQLTYC(UniMod:4)SLC(UniMod:4)PPDDLATR3	239526	250134	270097
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	AVAQNMDSVFK	AVAQNMDSVFK	2	AVAQNMDSVFK2	40605.1	47851.6	42357.2
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	AVAQPGLQLK	AVAQPGLQLK	2	AVAQPGLQLK2	164749	166492	152729
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AVASAAAALVLK	AVASAAAALVLK	2	AVASAAAALVLK2	526571	397266	388428
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	AVASCSEEAVQILLK	AVASC(UniMod:4)SEEAVQILLK	2	AVASC(UniMod:4)SEEAVQILLK2	4528.79	2159.42	1324.47
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	AVASEDMPESLPEAEQLLQQHAAIK	AVASEDMPESLPEAEQLLQQHAAIK	3	AVASEDMPESLPEAEQLLQQHAAIK3	46477.5	42345.8	60166.8
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	AVASEIFK	AVASEIFK	2	AVASEIFK2	432161	481156	469194
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	AVASQLDCNFLK	AVASQLDC(UniMod:4)NFLK	2	AVASQLDC(UniMod:4)NFLK2	130909	113971	120140
Q923S8	Q923S8	PANK4_RAT	Pank4	4'-phosphopantetheine phosphatase	1	AVASQPESVDAAER	AVASQPESVDAAER	2	AVASQPESVDAAER2	8416.63	9148.87	
A0A8I6ADA8	A0A8I6ADA8	A0A8I6ADA8_RAT	Abhd4	Abhydrolase domain containing 4, N-acyl phospholipase B	1	AVASVLGR	AVASVLGR	2	AVASVLGR2	79722.7	84550.5	77351.2
Q8VID1	Q8VID1	DHRS4_RAT	Dhrs4	Dehydrogenase/reductase SDR family member 4	1	AVATLQGEGLSVTGVVCHVGK	AVATLQGEGLSVTGVVC(UniMod:4)HVGK	3	AVATLQGEGLSVTGVVC(UniMod:4)HVGK3	9333.28	20181	5781.91
A0A8I6AC38	A0A8I6AC38	A0A8I6AC38_RAT	Wnk2	non-specific serine/threonine protein kinase	1	AVATSLDGR	AVATSLDGR	2	AVATSLDGR2	8690.85	12189	
Q4V8E2	Q4V8E2	Q4V8E2_RAT	Psmd14	Proteasome 26S subunit, non-ATPase 14	1	AVAVVVDPIQSVK	AVAVVVDPIQSVK	2	AVAVVVDPIQSVK2	257527	228488	230118
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	AVCAGQPSK	AVC(UniMod:4)AGQPSK	1	AVC(UniMod:4)AGQPSK1			3645.33
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	AVCAGQPSK	AVC(UniMod:4)AGQPSK	2	AVC(UniMod:4)AGQPSK2			93930.5
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	AVCCVAFSK	AVC(UniMod:4)C(UniMod:4)VAFSK	2	AVC(UniMod:4)C(UniMod:4)VAFSK2	40496.8	32327	36051.6
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	AVCGEMTR	AVC(UniMod:4)GEMTR	2	AVC(UniMod:4)GEMTR2	40735.7	38794.3	34772.9
Q3MIE4	Q3MIE4	VAT1_RAT	Vat1	Synaptic vesicle membrane protein VAT-1 homolog	1	AVCGFHLGYLDGEVELVSR	AVC(UniMod:4)GFHLGYLDGEVELVSR	3	AVC(UniMod:4)GFHLGYLDGEVELVSR3	34961.9	36914.2	30354.5
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	AVCGLCGNFNGNPDDDLALK	AVC(UniMod:4)GLC(UniMod:4)GNFNGNPDDDLALK	3	AVC(UniMod:4)GLC(UniMod:4)GNFNGNPDDDLALK3	392070	392555	401833
Q9QZR8	Q9QZR8	PDZD2_RAT	Pdzd2	PDZ domain-containing protein 2	1	AVCKPVGDICER	AVC(UniMod:4)KPVGDIC(UniMod:4)ER	3	AVC(UniMod:4)KPVGDIC(UniMod:4)ER3	8184.82	11346.4	
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	AVCKPVR	AVC(UniMod:4)KPVR	2	AVC(UniMod:4)KPVR2			27123.2
A0A8I6AF82	A0A8I6AF82	A0A8I6AF82_RAT	ENSRNOG00000070725	Tubulin alpha chain	1	AVCMLRNTTAIAEAWAR	AVC(UniMod:4)MLRNTTAIAEAWAR	3	AVC(UniMod:4)MLRNTTAIAEAWAR3	19712.7	17473.4	19125.6
Q5XIF6	P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9;Q6AY56	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	AVCMLSNTTAIAEAWAR	AVC(UniMod:4)MLSNTTAIAEAWAR	2	AVC(UniMod:4)MLSNTTAIAEAWAR2	6.65311e+06	7.41133e+06	7.66647e+06
Q5XIF6	P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9;Q6AY56	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	AVCMLSNTTAIAEAWAR	AVC(UniMod:4)MLSNTTAIAEAWAR	3	AVC(UniMod:4)MLSNTTAIAEAWAR3	3.08254e+06	3.70202e+06	4.04825e+06
F1LUM5	F1LUM5	F1LUM5_RAT	Tubal3	Tubulin alpha chain	1	AVCMLSNTTAIVEAWAR	AVC(UniMod:4)MLSNTTAIVEAWAR	2	AVC(UniMod:4)MLSNTTAIVEAWAR2	31336.7	63764.7	33738.7
F1LUM5	F1LUM5	F1LUM5_RAT	Tubal3	Tubulin alpha chain	1	AVCMLSNTTAIVEAWAR	AVC(UniMod:4)MLSNTTAIVEAWAR	3	AVC(UniMod:4)MLSNTTAIVEAWAR3	43833.4	85953.7	45740.6
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	AVCSGEITDSAGVVLSPNWPEPYGR	AVC(UniMod:4)SGEITDSAGVVLSPNWPEPYGR	3	AVC(UniMod:4)SGEITDSAGVVLSPNWPEPYGR3	11094.1	12755.9	13857.5
P15943	P15943	APLP2_RAT	Aplp2	Amyloid beta precursor like protein 2	1	AVCSQEAMTGPCR	AVC(UniMod:4)SQEAMTGPC(UniMod:4)R	2	AVC(UniMod:4)SQEAMTGPC(UniMod:4)R2	36003.7	41758.6	37331
Q642B4	Q642B4	Q642B4_RAT	Clec14a	C-type lectin domain containing 14A	1	AVCSVPGACYSLHHAAMK	AVC(UniMod:4)SVPGAC(UniMod:4)YSLHHAAMK	3	AVC(UniMod:4)SVPGAC(UniMod:4)YSLHHAAMK3	15259.9	9061.4	16480.7
Q642B4	Q642B4	Q642B4_RAT	Clec14a	C-type lectin domain containing 14A	1	AVCSVPGACYSLHHAAMK	AVC(UniMod:4)SVPGAC(UniMod:4)YSLHHAAMK	4	AVC(UniMod:4)SVPGAC(UniMod:4)YSLHHAAMK4	23373.8	27198.1	26887.6
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	AVCVEAGMIALR	AVC(UniMod:4)VEAGMIALR	2	AVC(UniMod:4)VEAGMIALR2	69150.9	71200	75488
D4AE59	D4AE59	STK11_RAT	Stk11	Serine/threonine-protein kinase STK11	1	AVCVNGTEPQLSSK	AVC(UniMod:4)VNGTEPQLSSK	2	AVC(UniMod:4)VNGTEPQLSSK2	5951	5975.43	
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	AVDCMTTMSVPSTLVK	AVDC(UniMod:4)MTTMSVPSTLVK	2	AVDC(UniMod:4)MTTMSVPSTLVK2	1843.32	2556.88	
G3V8S9	G3V8S9	G3V8S9_RAT	Camp	Cathelicidin antimicrobial peptide	1	AVDDFNQQSLDTNLYR	AVDDFNQQSLDTNLYR	2	AVDDFNQQSLDTNLYR2	37954.2	36123.8	28807.1
G3V8S9	G3V8S9	G3V8S9_RAT	Camp	Cathelicidin antimicrobial peptide	1	AVDDFNQQSLDTNLYR	AVDDFNQQSLDTNLYR	3	AVDDFNQQSLDTNLYR3	5833.26	1996.65	3977.89
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	AVDDGVNTFK	AVDDGVNTFK	2	AVDDGVNTFK2	507359	519048	549263
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	AVDDLNLHSYSNLPIWVNK	AVDDLNLHSYSNLPIWVNK	3	AVDDLNLHSYSNLPIWVNK3	96550.2	113610	101414
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	AVDEAADALLK	AVDEAADALLK	2	AVDEAADALLK2	114605	126212	153307
A0A8I5ZXB9	A0A8I5ZXB9	A0A8I5ZXB9_RAT	Kifap3	Kinesin-associated protein 3	1	AVDEDLENQTLR	AVDEDLENQTLR	2	AVDEDLENQTLR2	9969.4	12085.7	9314.1
A0A8I5ZXB9	A0A8I5ZXB9	A0A8I5ZXB9_RAT	Kifap3	Kinesin-associated protein 3	1	AVDEDLENQTLRK	AVDEDLENQTLRK	3	AVDEDLENQTLRK3	23403.4	25315.7	20434.4
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	AVDEFYSK	AVDEFYSK	2	AVDEFYSK2	55521.6	64643.4	49512.8
P62919	P62919;D4A6W6	RL8_RAT	Rpl8	Large ribosomal subunit protein uL2	0	AVDFAER	AVDFAER	2	AVDFAER2		44076.1	32904.4
A0A8I5ZP57	A0A8I5ZP57	A0A8I5ZP57_RAT	Pkdcc	Protein kinase domain containing, cytoplasmic	1	AVDFSGHDLGSCVR	AVDFSGHDLGSC(UniMod:4)VR	2	AVDFSGHDLGSC(UniMod:4)VR2	1295.29	3513.16	3149.48
A0A8I5ZP57	A0A8I5ZP57	A0A8I5ZP57_RAT	Pkdcc	Protein kinase domain containing, cytoplasmic	1	AVDFSGHDLGSCVR	AVDFSGHDLGSC(UniMod:4)VR	3	AVDFSGHDLGSC(UniMod:4)VR3	182481	191722	167429
Q8R508	Q8R508	FAT3_RAT	Fat3	Protocadherin Fat 3	1	AVDGGIPVR	AVDGGIPVR	2	AVDGGIPVR2	2119.76	3703.41	4490.97
Q62771	Q62771	STA5A_RAT	Stat5a	Signal transducer and activator of transcription 5A	1	AVDGYVKPQIK	AVDGYVKPQIK	3	AVDGYVKPQIK3	32100.4	20572.2	32541.1
F1LW77	F1LW77	F1LW77_RAT	Rab33b	RAB33B, member RAS oncogene family	1	AVDIDGER	AVDIDGER	2	AVDIDGER2	35557.7	31585.4	38045.7
A0A8I6AS56	A0A8I6AS56	A0A8I6AS56_RAT	Abhd11	Abhydrolase domain containing 11	1	AVDIPENIPHSR	AVDIPENIPHSR	3	AVDIPENIPHSR3	38457.4	31474.8	34647.2
P62907	F1LYQ7;A0A8I5ZRG4;A0A8I5Y9H0;P62907;A0A8I5ZVS9	RL10A_RAT	Rpl10a	Large ribosomal subunit protein uL1	0	AVDIPHMDIEALK	AVDIPHMDIEALK	3	AVDIPHMDIEALK3	35496.6	35561.3	30821.3
P62907	F1LYQ7;A0A8I5ZRG4;A0A8I5Y9H0;P62907;A0A8I5ZVS9	RL10A_RAT	Rpl10a	Large ribosomal subunit protein uL1	0	AVDIPHMDIEALKK	AVDIPHMDIEALKK	3	AVDIPHMDIEALKK3	37992.8	25734.3	24224.1
P62907	F1LYQ7;A0A8I5ZRG4;A0A8I5Y9H0;P62907;A0A8I5ZVS9	RL10A_RAT	Rpl10a	Large ribosomal subunit protein uL1	0	AVDIPHMDIEALKK	AVDIPHMDIEALKK	4	AVDIPHMDIEALKK4	47983.5	53993.2	45429
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	AVDLESVK	AVDLESVK	2	AVDLESVK2	130107	123035	107568
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	AVDLESVKEQLPAK	AVDLESVKEQLPAK	3	AVDLESVKEQLPAK3	34195.4	56603.8	48692.9
Q5XIP6	Q5XIP6	FEN1_RAT	Fen1	Flap endonuclease 1	1	AVDLIQK	AVDLIQK	1	AVDLIQK1	73448.2	56611.3	37218.5
Q5XIP6	Q5XIP6	FEN1_RAT	Fen1	Flap endonuclease 1	1	AVDLIQK	AVDLIQK	2	AVDLIQK2	46027.4	46378	47421.2
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	AVDLLYAMCDR	AVDLLYAMC(UniMod:4)DR	2	AVDLLYAMC(UniMod:4)DR2	25500.2	23393.2	19437.4
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	AVDMLLDNEDK	AVDMLLDNEDK	2	AVDMLLDNEDK2	17752.5	15322.2	24154
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	AVDNGSPPK	AVDNGSPPK	2	AVDNGSPPK2			31157.8
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	AVDNGSPPKESVVPVYVK	AVDNGSPPKESVVPVYVK	3	AVDNGSPPKESVVPVYVK3	8083.14	11462.7	6834.94
Q497B0	Q497B0	NIT2_RAT	Nit2	Omega-amidase NIT2	1	AVDNQVYVATASPAR	AVDNQVYVATASPAR	2	AVDNQVYVATASPAR2	18765.1	20925.2	19153.4
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	AVDPDEGVNGR	AVDPDEGVNGR	2	AVDPDEGVNGR2	19451.6	15459.4	27308.6
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	AVDPDGDGHVSWDEYK	AVDPDGDGHVSWDEYK	2	AVDPDGDGHVSWDEYK2	15427.8	25631.1	25143.5
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	AVDPDGDGHVSWDEYK	AVDPDGDGHVSWDEYK	3	AVDPDGDGHVSWDEYK3	136330	149452	145900
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	AVDPDSPAEASGLR	AVDPDSPAEASGLR	2	AVDPDSPAEASGLR2	306639	287732	285817
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	AVDPEGNCVSVGITSLTLK	AVDPEGNC(UniMod:4)VSVGITSLTLK	3	AVDPEGNC(UniMod:4)VSVGITSLTLK3	15901.5	14018.8	21016.3
Q4FZU0	Q4FZU0	Q4FZU0_RAT	Acp6	Acid phosphatase 6, lysophosphatidic	1	AVDPSTPPSK	AVDPSTPPSK	2	AVDPSTPPSK2	30997.2	17703.9	18558.7
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	AVDQDDDENSEEDEMDSGTMVR	AVDQDDDENSEEDEMDSGTMVR	3	AVDQDDDENSEEDEMDSGTMVR3	3554.77	3686.14	2669.47
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	AVDQSVLLLKPEAELSPSLIYDLPGMQESK	AVDQSVLLLKPEAELSPSLIYDLPGMQESK	4	AVDQSVLLLKPEAELSPSLIYDLPGMQESK4	26798.1	22552.3	23982.5
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	AVDQSVLLQK	AVDQSVLLQK	2	AVDQSVLLQK2	8.00179e+06	6.77323e+06	6.95548e+06
P27615	P27615	SCRB2_RAT	Scarb2	Lysosome membrane protein 2	1	AVDQTIEK	AVDQTIEK	2	AVDQTIEK2	25969.8	25441.9	29907.1
D3ZBX9	D3ZBX9	D3ZBX9_RAT	Ccdc92	Coiled-coil domain containing 92	1	AVDQVNAGK	AVDQVNAGK	2	AVDQVNAGK2	27563.8	30180.2	
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	AVDQWSTATGASHGDVER	AVDQWSTATGASHGDVER	2	AVDQWSTATGASHGDVER2	22711	35219.3	29600.8
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	AVDQWSTATGASHGDVER	AVDQWSTATGASHGDVER	3	AVDQWSTATGASHGDVER3	1.10943e+06	1.22134e+06	1.30087e+06
Q641Z2	Q641Z2	PTN9_RAT	Ptpn9	Tyrosine-protein phosphatase non-receptor type 9	1	AVDSFETQR	AVDSFETQR	2	AVDSFETQR2	4958.79	9312.72	7603.45
D3ZWA1	D3ZWA1	D3ZWA1_RAT	Mindy2	Ubiquitin carboxyl-terminal hydrolase	1	AVDSGGQGAAAAR	AVDSGGQGAAAAR	2	AVDSGGQGAAAAR2	15748.9		55530
O70595	O70595	ABCB6_RAT	Abcb6	ATP-binding cassette sub-family B member 6	1	AVDSLLNFETVK	AVDSLLNFETVK	2	AVDSLLNFETVK2	19336.9	23572.4	19328.4
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	AVDSLVPIGR	AVDSLVPIGR	2	AVDSLVPIGR2	2.775e+06	2.60412e+06	3.05444e+06
P21533	A0A0G2KBA1;P21533	RL6_RAT	Rpl6	Large ribosomal subunit protein eL6	0	AVDSQILPK	AVDSQILPK	2	AVDSQILPK2	70692.6	64818.4	65541.4
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	AVDTDMIILPCLSR	AVDTDMIILPC(UniMod:4)LSR	2	AVDTDMIILPC(UniMod:4)LSR2	20832.5	32309.8	29554.7
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	AVDTDMIILPCLSR	AVDTDMIILPC(UniMod:4)LSR	3	AVDTDMIILPC(UniMod:4)LSR3	9880.08	6545.77	12722.1
D3ZPA7	D3ZPA7	D3ZPA7_RAT	Scara3	Scavenger receptor class A, member 3	1	AVDTHHGEILR	AVDTHHGEILR	3	AVDTHHGEILR3	8616.19	12739	8909.48
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	AVDVFFPPEAQNDFPVAMQISEK	AVDVFFPPEAQNDFPVAMQISEK	3	AVDVFFPPEAQNDFPVAMQISEK3	77229.3	81289.2	86556.7
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	AVDVLCQCR	AVDVLC(UniMod:4)QC(UniMod:4)R	2	AVDVLC(UniMod:4)QC(UniMod:4)R2	49195.3	41299.3	37251.4
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	AVDWIFSHIDDLDAEAAMDISEGR	AVDWIFSHIDDLDAEAAMDISEGR	3	AVDWIFSHIDDLDAEAAMDISEGR3	43237.2	45704.1	36206.5
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	AVDYASK	AVDYASK	1	AVDYASK1	84071.8	68909.8	65196.9
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	AVEAAFNGR	AVEAAFNGR	2	AVEAAFNGR2	251044	259158	272199
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	AVEAGLNVKPYVK	AVEAGLNVKPYVK	3	AVEAGLNVKPYVK3	10971.4	10565.5	10629.4
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	AVEASSTMGQTAENFEVQEMLK	AVEASSTMGQTAENFEVQEMLK	3	AVEASSTMGQTAENFEVQEMLK3	22656.4	20408.8	23770.6
D3ZQ30	D3ZQ30	D3ZQ30_RAT	Telo2	Telomere length regulation protein TEL2 homolog	1	AVEAVLTGLVEAAPRPEVLSR	AVEAVLTGLVEAAPRPEVLSR	3	AVEAVLTGLVEAAPRPEVLSR3	7258.94	11389.7	7455.8
D3ZQ30	D3ZQ30	D3ZQ30_RAT	Telo2	Telomere length regulation protein TEL2 homolog	1	AVEAVLTGLVEAAPRPEVLSR	AVEAVLTGLVEAAPRPEVLSR	4	AVEAVLTGLVEAAPRPEVLSR4	7708.17	3480.28	
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	AVEAVVNDTSSENK	AVEAVVNDTSSENK	2	AVEAVVNDTSSENK2	18114.2	23011.7	13844
Q7TP42	Q7TP42	Q7TP42_RAT	Sec62	Translocation protein SEC62	1	AVECLLDSK	AVEC(UniMod:4)LLDSK	2	AVEC(UniMod:4)LLDSK2	204288	194606	203916
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	AVECPPPR	AVEC(UniMod:4)PPPR	2	AVEC(UniMod:4)PPPR2	29764.5	12621.8	23334.4
Q80ZF4	Q80ZF4	Q80ZF4_RAT	Mapkapk2	non-specific serine/threonine protein kinase	1	AVEDAALAH	AVEDAALAH	2	AVEDAALAH2	26503.8	18020.7	19613.9
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	AVEDACSEVQSPSAWTDSQSQILEYIHK	AVEDAC(UniMod:4)SEVQSPSAWTDSQSQILEYIHK	4	AVEDAC(UniMod:4)SEVQSPSAWTDSQSQILEYIHK4	7170.48	6492.67	4411.57
A0A0G2JYA3	A0A0G2JYA3	A0A0G2JYA3_RAT	Sppl2a	Signal peptide peptidase-like 2A	1	AVEDAEDR	AVEDAEDR	2	AVEDAEDR2			15680.9
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AVEDEATK	AVEDEATK	1	AVEDEATK1	519.434		32174.1
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AVEDEATK	AVEDEATK	2	AVEDEATK2			55748.1
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	AVEDIHGLFSLSK	AVEDIHGLFSLSK	2	AVEDIHGLFSLSK2	6255.27		6220.14
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	AVEDIHGLFSLSK	AVEDIHGLFSLSK	3	AVEDIHGLFSLSK3	141855	154903	158641
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	AVEDLCR	AVEDLC(UniMod:4)R	2	AVEDLC(UniMod:4)R2	56230.9	52649.4	56387
B0BNG0	B0BNG0	EMC2_RAT	Emc2	ER membrane protein complex subunit 2	1	AVEDMLETLQITQS	AVEDMLETLQITQS	2	AVEDMLETLQITQS2			6598.23
B5DF86	B5DF86	B5DF86_RAT	Cog8	Conserved oligomeric Golgi complex subunit 8	1	AVEEAVEK	AVEEAVEK	2	AVEEAVEK2	41665.5	40577.6	39636.1
Q4V8E2	Q4V8E2	Q4V8E2_RAT	Psmd14	Proteasome 26S subunit, non-ATPase 14	1	AVEEEDK	AVEEEDK	1	AVEEEDK1			1672.11
Q6AY97	Q6AY97	CCD91_RAT	Ccdc91	Coiled-coil domain-containing protein 91	1	AVEEERENLEK	AVEEERENLEK	3	AVEEERENLEK3	38653	47739	40223.3
B0BNK1	B0BNK1	B0BNK1_RAT	Rab5c	RAB5C, member RAS oncogene family	1	AVEFQEAQAYADDNSLLFMETSAK	AVEFQEAQAYADDNSLLFMETSAK	3	AVEFQEAQAYADDNSLLFMETSAK3	38091.8	35094.7	26561.5
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AVEGCVSASQAATEDGQLLR	AVEGC(UniMod:4)VSASQAATEDGQLLR	3	AVEGC(UniMod:4)VSASQAATEDGQLLR3	110444	96072.8	131691
P04764	M0R5J4;P15429;P04764	ENOA_RAT	Eno1	Alpha-enolase	0	AVEHINK	AVEHINK	1	AVEHINK1			17805.1
Q4V8A6	Q4V8A6	BL1S6_RAT	Bloc1s6	Biogenesis of lysosome-related organelles complex 1 subunit 6	1	AVEHLVGGLLSHYLPDLQR	AVEHLVGGLLSHYLPDLQR	3	AVEHLVGGLLSHYLPDLQR3	2446.43	5096.31	
Q4V8A6	Q4V8A6	BL1S6_RAT	Bloc1s6	Biogenesis of lysosome-related organelles complex 1 subunit 6	1	AVEHLVGGLLSHYLPDLQR	AVEHLVGGLLSHYLPDLQR	4	AVEHLVGGLLSHYLPDLQR4	13878.7	3619.87	9278.76
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	AVEHMFHR	AVEHMFHR	2	AVEHMFHR2	1392.11	1310.86	203.394
Q08851	Q08851	STX5_RAT	Stx5	Syntaxin-5	1	AVEIEELTYIIK	AVEIEELTYIIK	2	AVEIEELTYIIK2	18786.2	14038.8	12407.3
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	AVEIFTTCAHMICNMEELEK	AVEIFTTC(UniMod:4)AHMIC(UniMod:4)NMEELEK	3	AVEIFTTC(UniMod:4)AHMIC(UniMod:4)NMEELEK3	5960.93	19169.5	4803.7
F1MAR6	F1MAR6	F1MAR6_RAT	Prodh	Proline dehydrogenase	1	AVEIGYEDPINPTYEATNAMYHR	AVEIGYEDPINPTYEATNAMYHR	3	AVEIGYEDPINPTYEATNAMYHR3	3683.27	6416.05	5040.31
Q03346	Q03346	MPPB_RAT	Pmpcb	Mitochondrial-processing peptidase subunit beta	1	AVEILADIIQNSTLGEAEIER	AVEILADIIQNSTLGEAEIER	3	AVEILADIIQNSTLGEAEIER3	8518.7	9284.01	11277.8
Q03346	Q03346	MPPB_RAT	Pmpcb	Mitochondrial-processing peptidase subunit beta	1	AVEILADIIQNSTLGEAEIERER	AVEILADIIQNSTLGEAEIERER	3	AVEILADIIQNSTLGEAEIERER3	5258.79	4879.25	7164.15
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	AVEISGEGDPLGIHVVPFFSSLSGR	AVEISGEGDPLGIHVVPFFSSLSGR	3	AVEISGEGDPLGIHVVPFFSSLSGR3	14847.9	10239.7	12421.2
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	AVEIYASVAQLTPVDSEALESEANK	AVEIYASVAQLTPVDSEALESEANK	3	AVEIYASVAQLTPVDSEALESEANK3	57178.4	54504.9	47711.3
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	AVELAANTK	AVELAANTK	2	AVELAANTK2	203873	202569	192136
A0A0G2K3Y6	A0A0G2K3Y6;D4AD99;D3ZHK8	A0A0G2K3Y6_RAT	Cpeb4	Cytoplasmic polyadenylation element binding protein 4	0	AVELAMIMDR	AVELAMIMDR	2	AVELAMIMDR2	4087.81	5946.76	5154
Q641Z2	Q641Z2	PTN9_RAT	Ptpn9	Tyrosine-protein phosphatase non-receptor type 9	1	AVELFHCYR	AVELFHC(UniMod:4)YR	3	AVELFHC(UniMod:4)YR3	11926.1	10131.2	4282.76
F1M9D0	F1M9D0	F1M9D0_RAT	Map3k2	Mitogen activated protein kinase kinase kinase 2	1	AVELLDR	AVELLDR	2	AVELLDR2	13510.7	16267.6	18869.8
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	AVELLRK	AVELLRK	2	AVELLRK2	97924.3	62656.4	122507
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	AVELMCLVPK	AVELMC(UniMod:4)LVPK	2	AVELMC(UniMod:4)LVPK2	143506	148534	134263
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	AVELMER	AVELMER	2	AVELMER2	173234	184104	176645
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	AVELNPK	AVELNPK	2	AVELNPK2	324334	273830	292598
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	AVELPEK	AVELPEK	2	AVELPEK2	82202.2	82645.3	74581
D3ZDK7	D3ZDK7	PGP_RAT	Pgp	Glycerol-3-phosphate phosphatase	1	AVEMAAQR	AVEMAAQR	2	AVEMAAQR2	18668.8	10742.2	12196.3
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	AVENLIPPVQHSLLDQK	AVENLIPPVQHSLLDQK	3	AVENLIPPVQHSLLDQK3	37301.7	41431.4	28641.8
P18422	P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	1	AVENSSTAIGIR	AVENSSTAIGIR	2	AVENSSTAIGIR2	2.17629e+06	2.052e+06	1.97946e+06
P18422	P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	1	AVENSSTAIGIR	AVENSSTAIGIR	3	AVENSSTAIGIR3	43983.6	37014.8	45402.5
D4ADF5	D4ADF5	D4ADF5_RAT	Pdcd5	Programmed cell death 5	1	AVENYLIQMAR	AVENYLIQMAR	2	AVENYLIQMAR2	68949.7	75217.2	53455
Q5XIQ8	Q5XIQ8	Q5XIQ8_RAT	Chpf	Hexosyltransferase	1	AVEPALLQR	AVEPALLQR	2	AVEPALLQR2	2506.13	3986.01	
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	AVEPAMPVVQPK	AVEPAMPVVQPK	2	AVEPAMPVVQPK2	102018	79623.9	76299.1
A0A8I6AI88	A0A8I6AI88	A0A8I6AI88_RAT	Chpf2	Hexosyltransferase	1	AVEPGLVQK	AVEPGLVQK	2	AVEPGLVQK2	11770.2	6944.18	9785.67
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	AVEPLGDK	AVEPLGDK	1	AVEPLGDK1	135247	133503	138037
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	AVEPLGDK	AVEPLGDK	2	AVEPLGDK2	1.60525e+07	1.56447e+07	1.65551e+07
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	AVEPLGDKFNMALVQQMEK	AVEPLGDKFNMALVQQMEK	3	AVEPLGDKFNMALVQQMEK3	7.1019e+06	8.22298e+06	8.07623e+06
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	AVEPLGDKFNMALVQQMEK	AVEPLGDKFNMALVQQMEK	4	AVEPLGDKFNMALVQQMEK4	5095.31	9864.76	2986.66
Q5XIJ5	Q5XIJ5	AB17A_RAT	Abhd17a	Alpha/beta hydrolase domain-containing protein 17A	1	AVEPLWVEGAGHNDIELYSQYLER	AVEPLWVEGAGHNDIELYSQYLER	3	AVEPLWVEGAGHNDIELYSQYLER3	3756.92	1896.25	
E9PSP1	E9PSP1	E9PSP1_RAT	Pltp	Phospholipid transfer protein	1	AVEPQLDDDER	AVEPQLDDDER	2	AVEPQLDDDER2	273963	259519	213369
Q5FWS5	Q5FWS5	Q5FWS5_RAT	Loxl1	Lysyl oxidase homolog	1	AVEPQPPFR	AVEPQPPFR	2	AVEPQPPFR2	202257	181517	156637
Q5RKJ1	Q5RKJ1	MAEA_RAT	Maea	E3 ubiquitin-protein transferase MAEA	1	AVESIQAEDESAK	AVESIQAEDESAK	2	AVESIQAEDESAK2		3313.24	5206.14
A0A8I6ANB2	A0A8I6ANB2	A0A8I6ANB2_RAT	Ppfibp1	PPFIA binding protein 1	1	AVESLMAANEEKER	AVESLMAANEEKER	3	AVESLMAANEEKER3	1918.15	7207.12	
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	AVESMPR	AVESMPR	2	AVESMPR2	64668.7	76463.1	58890.7
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	AVETELEYQK	AVETELEYQK	2	AVETELEYQK2	36069.3	76048	57768.9
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	AVETPPMSSVNLLEGLSR	AVETPPMSSVNLLEGLSR	2	AVETPPMSSVNLLEGLSR2	43675.8	47313.3	37115.5
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	AVETPPMSSVNLLEGLSR	AVETPPMSSVNLLEGLSR	3	AVETPPMSSVNLLEGLSR3	1985.61		4298.56
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	AVETTAQSDNK	AVETTAQSDNK	2	AVETTAQSDNK2			10671.8
Q562B5	Q562B5	PGAM5_RAT	Pgam5	Serine/threonine-protein phosphatase PGAM5, mitochondrial	1	AVETTDIISK	AVETTDIISK	2	AVETTDIISK2	34450.1	29479.9	29529.8
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	AVEVAWETLQDEFSR	AVEVAWETLQDEFSR	2	AVEVAWETLQDEFSR2	17813.2	22004.2	22202.7
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	AVEVAWETLQDEFSR	AVEVAWETLQDEFSR	3	AVEVAWETLQDEFSR3	17716.3	15206.8	21506.1
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	AVEVLLSIYPSMQK	AVEVLLSIYPSMQK	2	AVEVLLSIYPSMQK2	16810	5857.06	8509.44
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	AVEVMPK	AVEVMPK	1	AVEVMPK1	92283.9	62705.9	59857.5
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	AVEVMPK	AVEVMPK	2	AVEVMPK2	4.30676e+06	4.08834e+06	4.57738e+06
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	AVEYFQDNSPDSPELNK	AVEYFQDNSPDSPELNK	2	AVEYFQDNSPDSPELNK2	2907.49	4443.74	5949.59
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	AVEYFQDNSPDSPELNK	AVEYFQDNSPDSPELNK	3	AVEYFQDNSPDSPELNK3	12328.4	2707.89	5768.94
Q4KMA2	Q4KMA2	RD23B_RAT	Rad23b	UV excision repair protein RAD23 homolog B	1	AVEYLLMGIPGDR	AVEYLLMGIPGDR	2	AVEYLLMGIPGDR2	18710.6	20771.7	11964
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	AVEYNALFK	AVEYNALFK	2	AVEYNALFK2	146508	169024	165115
D3ZGW2	D3ZGW2	D3ZGW2_RAT	Ap1g2	AP-1 complex subunit gamma	1	AVEYNVLFQK	AVEYNVLFQK	2	AVEYNVLFQK2	4504.32	8573.84	2820.39
Q9EPX4	Q9EPX4	P2Y12_RAT	P2ry12	P2Y purinoceptor 12	1	AVFDCNAENTLFYVK	AVFDC(UniMod:4)NAENTLFYVK	2	AVFDC(UniMod:4)NAENTLFYVK2	8413.29	6390.47	7367.9
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	AVFDETYPDPVR	AVFDETYPDPVR	2	AVFDETYPDPVR2	20884.6	19040.6	20000.9
A0A8I6GAD6	A0A8I6GAD6	A0A8I6GAD6_RAT	Nrbp1	Nuclear receptor binding protein 1	1	AVFDNLIQLEHLNIVK	AVFDNLIQLEHLNIVK	2	AVFDNLIQLEHLNIVK2	22889.5		14153.5
A0A8I6GAD6	A0A8I6GAD6	A0A8I6GAD6_RAT	Nrbp1	Nuclear receptor binding protein 1	1	AVFDNLIQLEHLNIVK	AVFDNLIQLEHLNIVK	3	AVFDNLIQLEHLNIVK3	47534.1	32731.2	23201
A0A0G2JUU7	A0A0G2JUU7	A0A0G2JUU7_RAT	Tubgcp3	Gamma-tubulin complex component	1	AVFDQIIELQNAQDTMYR	AVFDQIIELQNAQDTMYR	3	AVFDQIIELQNAQDTMYR3	4716.67		1885.64
Q9WTQ2	Q9WTQ2	PODXL_RAT	Podxl	Podocalyxin	1	AVFELLK	AVFELLK	1	AVFELLK1	15303.2	12398.4	20262.8
Q9WTQ2	Q9WTQ2	PODXL_RAT	Podxl	Podocalyxin	1	AVFELLK	AVFELLK	2	AVFELLK2	761128	812233	760803
Q9WTQ2	Q9WTQ2	PODXL_RAT	Podxl	Podocalyxin	1	AVFELLKDK	AVFELLKDK	2	AVFELLKDK2	9195.23	10386.1	7717.73
Q9WTQ2	Q9WTQ2	PODXL_RAT	Podxl	Podocalyxin	1	AVFELLKDKWDDLTEAGVIDIHLGK	AVFELLKDKWDDLTEAGVIDIHLGK	4	AVFELLKDKWDDLTEAGVIDIHLGK4	17019.3	35533.6	14914.2
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	AVFGCHETYK	AVFGC(UniMod:4)HETYK	2	AVFGC(UniMod:4)HETYK2	1.4276e+06	1.15992e+06	1.18542e+06
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	AVFGCHETYK	AVFGC(UniMod:4)HETYK	3	AVFGC(UniMod:4)HETYK3	5.83894e+06	6.05863e+06	6.6929e+06
Q62784	Q62784	INP4A_RAT	Inpp4a	Inositol polyphosphate-4-phosphatase type I A	1	AVFGGAICR	AVFGGAIC(UniMod:4)R	2	AVFGGAIC(UniMod:4)R2	7439.04	8334.91	11829.3
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	AVFGGWTR	AVFGGWTR	2	AVFGGWTR2	15416.4	17927.5	11955.2
Q2TGK3	Q2TGK3	ZDHC3_RAT	Zdhhc3	Palmitoyltransferase ZDHHC3	1	AVFGHPFSLGWASPFATPDQGK	AVFGHPFSLGWASPFATPDQGK	3	AVFGHPFSLGWASPFATPDQGK3	8632.74	13909.5	16398.3
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	AVFHISTSQASGPGVTLAPTTAFR	AVFHISTSQASGPGVTLAPTTAFR	3	AVFHISTSQASGPGVTLAPTTAFR3	124483	108035	112764
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	AVFPEGPWEEPLQLR	AVFPEGPWEEPLQLR	2	AVFPEGPWEEPLQLR2	73991.2	118979	113626
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	AVFPEGPWEEPLQLR	AVFPEGPWEEPLQLR	3	AVFPEGPWEEPLQLR3	20664	23587.4	24197.1
P68136	P60711;P63259;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	AVFPSIVGR	AVFPSIVGR	1	AVFPSIVGR1	17569.5	16110.5	
P68136	P60711;P63259;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	AVFPSIVGR	AVFPSIVGR	2	AVFPSIVGR2	3.12954e+07	2.75267e+07	2.52254e+07
P68136	P60711;P63259;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	AVFPSIVGRPR	AVFPSIVGRPR	2	AVFPSIVGRPR2	1.93359e+06	1.69146e+06	1.66628e+06
P68136	P60711;P63259;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	AVFPSIVGRPR	AVFPSIVGRPR	3	AVFPSIVGRPR3	5.85371e+07	5.95108e+07	6.63508e+07
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	AVFQANQENLPILK	AVFQANQENLPILK	2	AVFQANQENLPILK2	191013	179694	236922
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	AVFQANQENLPILK	AVFQANQENLPILK	3	AVFQANQENLPILK3	22829.8	23063	19685.9
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	AVFQESIR	AVFQESIR	2	AVFQESIR2	983914	919877	1.01914e+06
Q8K3V3	Q8K3V3	AGRG1_RAT	Adgrg1	Adhesion G-protein coupled receptor G1	1	AVFQQTR	AVFQQTR	2	AVFQQTR2	46680.4	44221.1	49817.9
Q6Q0N1	Q6Q0N1	CNDP2_RAT	Cndp2	Cytosolic non-specific dipeptidase	1	AVFQYIDENQDR	AVFQYIDENQDR	2	AVFQYIDENQDR2	16357.1	13725.4	15708.1
Q6Q0N1	Q6Q0N1	CNDP2_RAT	Cndp2	Cytosolic non-specific dipeptidase	1	AVFQYIDENQDR	AVFQYIDENQDR	3	AVFQYIDENQDR3	781.482	1528.75	3020.36
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	AVFVAQVLTGDYGQGSR	AVFVAQVLTGDYGQGSR	2	AVFVAQVLTGDYGQGSR2	3927.41	1674.55	5931.69
Q5XIF6	Q5XIF6	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	1	AVFVDLEPTVIDEIR	AVFVDLEPTVIDEIR	2	AVFVDLEPTVIDEIR2	8.33233e+06	9.47691e+06	8.16465e+06
Q5XIF6	Q5XIF6	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	1	AVFVDLEPTVIDEIR	AVFVDLEPTVIDEIR	3	AVFVDLEPTVIDEIR3	455406	615570	498063
Q5XIF6	Q5XIF6	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	1	AVFVDLEPTVIDEIRNGPYR	AVFVDLEPTVIDEIRNGPYR	3	AVFVDLEPTVIDEIRNGPYR3	21779.7	23610.7	15440.3
Q6AYZ1	A0A8I6AF82;P68370;Q6AYZ1;Q6P9V9	TBA1C_RAT	Tuba1c	Tubulin alpha-1C chain	0	AVFVDLEPTVIDEVR	AVFVDLEPTVIDEVR	2	AVFVDLEPTVIDEVR2	26835.6	34495.4	35462.3
Q6AYZ1	A0A8I6AF82;P68370;Q6AYZ1;Q6P9V9	TBA1C_RAT	Tuba1c	Tubulin alpha-1C chain	0	AVFVDLEPTVIDEVR	AVFVDLEPTVIDEVR	3	AVFVDLEPTVIDEVR3	1.79469e+06	2.01085e+06	2.02752e+06
Q6AYZ1	A0A8I6AF82;P68370;Q6AYZ1;Q6P9V9	TBA1C_RAT	Tuba1c	Tubulin alpha-1C chain	0	AVFVDLEPTVIDEVRTGTYR	AVFVDLEPTVIDEVRTGTYR	3	AVFVDLEPTVIDEVRTGTYR3	38195.5	39849.7	50110.8
Q5U2R9	Q5U2R9	Q5U2R9_RAT	Scfd2	Sec1 family domain containing 2	1	AVFVLSSLLK	AVFVLSSLLK	2	AVFVLSSLLK2	22652.5	19664	18865.6
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	AVFVPDIYSR	AVFVPDIYSR	2	AVFVPDIYSR2	153261	153785	135852
P97711	P97711	GRK6_RAT	Grk6	G protein-coupled receptor kinase 6	1	AVFYAAEICCGLEDLHR	AVFYAAEIC(UniMod:4)C(UniMod:4)GLEDLHR	3	AVFYAAEIC(UniMod:4)C(UniMod:4)GLEDLHR3	13350.7	13717.9	15370.1
D3ZTA9	D3ZTA9	D3ZTA9_RAT	Hs3st3b1	Sulfotransferase	1	AVGAEPHFFDR	AVGAEPHFFDR	3	AVGAEPHFFDR3	16229.4	13547.9	11076.2
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AVGDASK	AVGDASK	1	AVGDASK1	2015.58		4036.54
D3ZUN5	D3ZUN5	D3ZUN5_RAT	Pofut2	GDP-fucose protein O-fucosyltransferase 2	1	AVGDEFR	AVGDEFR	2	AVGDEFR2	21719.3	26000.9	31704.5
Q9JID1	Q9JID1	PDCD4_RAT	Pdcd4	Programmed cell death protein 4	1	AVGDGILCNTYIDSYK	AVGDGILC(UniMod:4)NTYIDSYK	2	AVGDGILC(UniMod:4)NTYIDSYK2	12048.3	10961.1	11786.5
Q63598	Q63598	PLST_RAT	Pls3	Plastin-3	1	AVGDGIVLCK	AVGDGIVLC(UniMod:4)K	2	AVGDGIVLC(UniMod:4)K2	14268.5	16068.6	21015.4
Q2TBJ5	Q2TBJ5	ATG12_RAT	Atg12	Ubiquitin-like protein ATG12	1	AVGDTPIMK	AVGDTPIMK	2	AVGDTPIMK2	34327.5	34518.8	27248.8
D4A8B0	D4A8B0	D4A8B0_RAT	Sec14l5	SEC14-like lipid binding 5	1	AVGEEALLQHVLSVNEEGQK	AVGEEALLQHVLSVNEEGQK	3	AVGEEALLQHVLSVNEEGQK3	20410.7	17343	14409.4
Q4KLG9	Q4KLG9	ZFN2B_RAT	Zfand2b	AN1-type zinc finger protein 2B	1	AVGEHIDR	AVGEHIDR	2	AVGEHIDR2	20844.1	86431.2	67236
P18645	P18645	GALE_RAT	Gale	UDP-glucose 4-epimerase	1	AVGESVQKPLDYYR	AVGESVQKPLDYYR	3	AVGESVQKPLDYYR3	12920.3	9045.86	16160.4
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	AVGEVTSAEGTWVQLDK	AVGEVTSAEGTWVQLDK	2	AVGEVTSAEGTWVQLDK2	8828.46	7113.3	8517.81
M0RAK0	M0RAK0	M0RAK0_RAT	Proser2	Proline and serine rich 2	1	AVGFRPQGITVQFSGR	AVGFRPQGITVQFSGR	3	AVGFRPQGITVQFSGR3	101139	84632.1	101221
D3ZSY8	D3ZSY8	D3ZSY8_RAT	Tbc1d10b	TBC1 domain family, member 10b	1	AVGGAPSPPPPVR	AVGGAPSPPPPVR	2	AVGGAPSPPPPVR2	46808.8	34307.2	34608.6
F7FL28	F7FL28	F7FL28_RAT	Napsa	Napsin A aspartic peptidase	1	AVGGFPLLTGQYLIQCSK	AVGGFPLLTGQYLIQC(UniMod:4)SK	3	AVGGFPLLTGQYLIQC(UniMod:4)SK3		1249.49	
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	AVGHPFVIQLGR	AVGHPFVIQLGR	3	AVGHPFVIQLGR3	41938.8	40194.4	44128.5
D3ZAP9	D3ZAP9	D3ZAP9_RAT	Gpd1l1	Glycerol-3-phosphate dehydrogenase [NAD(+)]	1	AVGITLIK	AVGITLIK	2	AVGITLIK2	36938.7	24362.1	34523.3
P61515	A0A8I6ANA8;A0A8I6ADZ2;P61515;A0A8I5ZL35	RL37A_RAT	Rpl37a	Large ribosomal subunit protein eL43	0	AVGIWHCGSCMK	AVGIWHC(UniMod:4)GSC(UniMod:4)MK	3	AVGIWHC(UniMod:4)GSC(UniMod:4)MK3	27765.8	12735.4	23056.9
P98166	P98166	VLDLR_RAT	Vldlr	Very low-density lipoprotein receptor	1	AVGKEPSLIFTNR	AVGKEPSLIFTNR	3	AVGKEPSLIFTNR3	8104.14	12623.8	8832.79
F1LU71	F1LU71	AUHM_RAT	Auh	Methylglutaconyl-CoA hydratase, mitochondrial	1	AVGLISHVLEQNQEGDAAYRK	AVGLISHVLEQNQEGDAAYRK	3	AVGLISHVLEQNQEGDAAYRK3	9588.04	22702.5	15862.3
F1LU71	F1LU71	AUHM_RAT	Auh	Methylglutaconyl-CoA hydratase, mitochondrial	1	AVGLISHVLEQNQEGDAAYRK	AVGLISHVLEQNQEGDAAYRK	4	AVGLISHVLEQNQEGDAAYRK4	31377.8	51234.3	41598.5
D3ZFQ3	D3ZFQ3	D3ZFQ3_RAT	Nubpl	Nucleotide binding protein-like	1	AVGLLDVDVYGPSIPK	AVGLLDVDVYGPSIPK	2	AVGLLDVDVYGPSIPK2	13346.8	9950.33	12389.2
D3ZWA1	D3ZWA1	D3ZWA1_RAT	Mindy2	Ubiquitin carboxyl-terminal hydrolase	1	AVGNCSYNQLVEK	AVGNC(UniMod:4)SYNQLVEK	2	AVGNC(UniMod:4)SYNQLVEK2	18033.1	13902.2	11498.3
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	AVGPEITK	AVGPEITK	2	AVGPEITK2	631928	764112	621466
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	AVGPFQTHTFR	AVGPFQTHTFR	2	AVGPFQTHTFR2	49072.8	48585.3	38798.4
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	AVGPFQTHTFR	AVGPFQTHTFR	3	AVGPFQTHTFR3	154860	155882	175066
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	AVGPSSTQLYMVR	AVGPSSTQLYMVR	2	AVGPSSTQLYMVR2	120350	114026	100303
M0RDU0	M0RDU0	HAP40_RAT	F8a1	40-kDa huntingtin-associated protein	1	AVGQPAAAAGHFQR	AVGQPAAAAGHFQR	3	AVGQPAAAAGHFQR3	52281.3	50587.3	35345.1
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	AVGSGAWPQESNQPAK	AVGSGAWPQESNQPAK	2	AVGSGAWPQESNQPAK2	22708	21044.3	19661.8
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	AVGSIGFLLFTNR	AVGSIGFLLFTNR	2	AVGSIGFLLFTNR2	58400.9	73074.7	63285.3
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	AVGSIGFLLFTNR	AVGSIGFLLFTNR	3	AVGSIGFLLFTNR3	4746.59	9504.73	6687.92
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	AVGSPVFVCQANR	AVGSPVFVC(UniMod:4)QANR	2	AVGSPVFVC(UniMod:4)QANR2	134054	137404	143976
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	AVGSPVFVCQANR	AVGSPVFVC(UniMod:4)QANR	3	AVGSPVFVC(UniMod:4)QANR3	4522.87	5491.4	4905.51
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	AVGTPGGNSGGAGPGISTMSR	AVGTPGGNSGGAGPGISTMSR	2	AVGTPGGNSGGAGPGISTMSR2	11222.7	12035.7	20213.7
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	AVGTPGGNSGGAGPGISTMSR	AVGTPGGNSGGAGPGISTMSR	3	AVGTPGGNSGGAGPGISTMSR3	8184.7	4551.14	837.458
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	AVGTQALSGAGLLK	AVGTQALSGAGLLK	2	AVGTQALSGAGLLK2	80266.6	87099	86023.8
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	AVGTQALSGAGLLK	AVGTQALSGAGLLK	3	AVGTQALSGAGLLK3	4135.35	2083.98	6416.86
Q5FVN2	Q5FVN2	TM41B_RAT	Tmem41b	Transmembrane protein 41B	1	AVGTQGSAAPGNK	AVGTQGSAAPGNK	2	AVGTQGSAAPGNK2			31427.7
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	AVGYQYFR	AVGYQYFR	2	AVGYQYFR2	210761	166391	183639
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	AVGYYSATSK	AVGYYSATSK	2	AVGYYSATSK2	60573.6	74699.9	65123.5
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	AVHGFFTSNNATR	AVHGFFTSNNATR	2	AVHGFFTSNNATR2	17899.4	16611.4	23153.3
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	AVHGFFTSNNATR	AVHGFFTSNNATR	3	AVHGFFTSNNATR3	33121.5	58104.2	39052.9
D3ZUV2	D3ZUV2	D3ZUV2_RAT	Mib1	RING-type E3 ubiquitin transferase	1	AVHHAAFGDEGAVIEVLHR	AVHHAAFGDEGAVIEVLHR	4	AVHHAAFGDEGAVIEVLHR4	8698.18		6591.03
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	AVHHLQLAALDSQGAIVDGPVPIIIEVK	AVHHLQLAALDSQGAIVDGPVPIIIEVK	3	AVHHLQLAALDSQGAIVDGPVPIIIEVK3	14596.3	29595.3	19393.6
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	AVHHLQLAALDSQGAIVDGPVPIIIEVK	AVHHLQLAALDSQGAIVDGPVPIIIEVK	4	AVHHLQLAALDSQGAIVDGPVPIIIEVK4	97125	106097	126983
F7FA09	F7FA09	F7FA09_RAT	Pex11b	Peroxisomal biogenesis factor 11 beta	1	AVHLSDVVLR	AVHLSDVVLR	2	AVHLSDVVLR2	28216.5		26173.4
P97535	P97535	PLA1A_RAT	Pla1a	Phospholipase A1 member A	1	AVHLYISALENTCPLMAFPCASYK	AVHLYISALENTC(UniMod:4)PLMAFPC(UniMod:4)ASYK	3	AVHLYISALENTC(UniMod:4)PLMAFPC(UniMod:4)ASYK3	29169.3	34061.3	17481.9
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	AVHSLVPVGR	AVHSLVPVGR	2	AVHSLVPVGR2	6946.47		
D3ZL50	D3ZL50	D3ZL50_RAT	Skic3	Tetratricopeptide repeat domain 37	1	AVHSNPADPALWSLLSR	AVHSNPADPALWSLLSR	3	AVHSNPADPALWSLLSR3	3043.21	4908.71	
D4A7L4	D4A7L4	D4A7L4_RAT	Ndufb11	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial	1	AVIAPSGVER	AVIAPSGVER	2	AVIAPSGVER2	208042	181895	189648
D4A9N5	D4A9N5	D4A9N5_RAT	Trim25	Tripartite motif-containing 25	1	AVIDAAETSSTHK	AVIDAAETSSTHK	2	AVIDAAETSSTHK2	2155.88	3397.17	2351.89
D4A9N5	D4A9N5	D4A9N5_RAT	Trim25	Tripartite motif-containing 25	1	AVIDAAETSSTHK	AVIDAAETSSTHK	3	AVIDAAETSSTHK3	7943.22	3015.47	6596.13
P37727	P37727	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	1	AVIDQFGQR	AVIDQFGQR	2	AVIDQFGQR2	36777.8	44290.6	33772.6
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	AVIEHNLLSASK	AVIEHNLLSASK	2	AVIEHNLLSASK2	10149.3	11586.1	4609.97
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	AVIEHNLLSASK	AVIEHNLLSASK	3	AVIEHNLLSASK3	244748	238892	222751
O35346	O35346	FAK1_RAT	Ptk2	Focal adhesion kinase 1	1	AVIEMSSK	AVIEMSSK	2	AVIEMSSK2	23360.1	11979.5	15117.4
Q6AY84	Q6AY84	SCRN1_RAT	Scrn1	Secernin-1	1	AVIESDQEQGR	AVIESDQEQGR	2	AVIESDQEQGR2	10946.2	12474.8	5145.72
Q7M0E3	Q7M0E3	DEST_RAT	Dstn	Destrin	1	AVIFCLSADK	AVIFC(UniMod:4)LSADK	2	AVIFC(UniMod:4)LSADK2	188686	169877	154842
Q7M0E3	Q7M0E3	DEST_RAT	Dstn	Destrin	1	AVIFCLSADKK	AVIFC(UniMod:4)LSADKK	2	AVIFC(UniMod:4)LSADKK2	14589.7	6255.77	10890.3
Q7M0E3	Q7M0E3	DEST_RAT	Dstn	Destrin	1	AVIFCLSADKK	AVIFC(UniMod:4)LSADKK	3	AVIFC(UniMod:4)LSADKK3	184991	125064	178842
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	AVIGSTYMLTQDEVLWEK	AVIGSTYMLTQDEVLWEK	3	AVIGSTYMLTQDEVLWEK3	12372.8	13343	14944.4
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	AVIHYRDDETMYVESK	AVIHYRDDETMYVESK	3	AVIHYRDDETMYVESK3	14142.4	4720.83	10730.4
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	AVIHYRDDETMYVESK	AVIHYRDDETMYVESK	4	AVIHYRDDETMYVESK4	44809.4	28031.7	32245.3
Q9WVS2	Q9WVS2	OSGEP_RAT	Osgep	tRNA N6-adenosine threonylcarbamoyltransferase	1	AVILDLLQEALTEAGLTPK	AVILDLLQEALTEAGLTPK	3	AVILDLLQEALTEAGLTPK3		5257.36	
Q5XIC1	Q5XIC1	GMPPA_RAT	Gmppa	Mannose-1-phosphate guanyltransferase alpha	1	AVILIGGPQK	AVILIGGPQK	2	AVILIGGPQK2	6378.55		13344.3
P29411	P29411	KAD3_RAT	Ak3	GTP:AMP phosphotransferase AK3, mitochondrial	1	AVIMGAPGSGK	AVIMGAPGSGK	2	AVIMGAPGSGK2	64245.3	55490.8	50926.3
A0A8I6GEB4	A0A8I6GEB4	A0A8I6GEB4_RAT	Rpe	Ribulose-phosphate 3-epimerase	1	AVINLLR	AVINLLR	2	AVINLLR2	78413.8	72046.9	57717.9
O70467	O70467	ANM3_RAT	Prmt3	Protein arginine N-methyltransferase 3	1	AVIPEAVVEVVDHK	AVIPEAVVEVVDHK	3	AVIPEAVVEVVDHK3	10674.8		13392.9
G3V7V5	G3V7V5	G3V7V5_RAT	Fkbp11	peptidylprolyl isomerase	1	AVIPSHLAYGK	AVIPSHLAYGK	3	AVIPSHLAYGK3	48620.2	43545.6	58386.9
A0A8I5Y868	A0A8I5Y868	A0A8I5Y868_RAT	Klc2	Kinesin light chain	1	AVIQGLETLR	AVIQGLETLR	2	AVIQGLETLR2	13633.9	7398.07	13215.6
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	AVIQHFQEK	AVIQHFQEK	2	AVIQHFQEK2	8521.96	8755.23	5041.84
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	AVIQWIR	AVIQWIR	2	AVIQWIR2	3.31117e+06	2.44444e+06	2.29175e+06
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	AVIQYSCEETFYTMSSNGK	AVIQYSC(UniMod:4)EETFYTMSSNGK	3	AVIQYSC(UniMod:4)EETFYTMSSNGK3	21782.8	23717.3	25826
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	AVITANLDIR	AVITANLDIR	2	AVITANLDIR2	13714.9	12522.1	10388.1
G3V829	G3V829	G3V829_RAT	Fubp3	Far upstream element binding protein 3	1	AVITEEFKVPDK	AVITEEFKVPDK	3	AVITEEFKVPDK3		7802.97	5524.91
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	AVITPHDFDECR	AVITPHDFDEC(UniMod:4)R	3	AVITPHDFDEC(UniMod:4)R3	38047.9	36662.6	33529.2
A0A8I6AMK1	A0A8I6AMK1	A0A8I6AMK1_RAT	Kdsr	3-dehydrosphinganine reductase	1	AVITTMK	AVITTMK	2	AVITTMK2	10152.4		
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	AVITVQR	AVITVQR	2	AVITVQR2	118791	110882	120978
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	AVIWGLYR	AVIWGLYR	2	AVIWGLYR2	23752.4	34171.9	31425.7
Q9JLT0	Q9JLT0	MYH10_RAT	Myh10	Myosin-10	1	AVIYNPATQADWTAK	AVIYNPATQADWTAK	2	AVIYNPATQADWTAK2	7297.99		2967.41
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	AVKVPMMYR	AVKVPMMYR	2	AVKVPMMYR2	11609.2	9835.47	9267.73
D3ZHW0	D3ZHW0	D3ZHW0_RAT	Dhx29	ATP-dependent RNA helicase DHX29	1	AVLAAGLYDSVGK	AVLAAGLYDSVGK	2	AVLAAGLYDSVGK2	3554.17	3480.1	
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	AVLAALK	AVLAALK	1	AVLAALK1	604.611	1774.36	2339.46
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	AVLACLR	AVLAC(UniMod:4)LR	2	AVLAC(UniMod:4)LR2	15319.4	18031.6	11970.7
A0A8I6GHU4	A0A8I6GHU4	A0A8I6GHU4_RAT	ENSRNOG00000066358	Nuclear export mediator factor	1	AVLAELNANLLGMR	AVLAELNANLLGMR	2	AVLAELNANLLGMR2	26482.8	27877.2	29664.1
F1M1L9	F1M1L9	F1M1L9_RAT	Cpne2	Copine 2	1	AVLAELPQQVVQYFK	AVLAELPQQVVQYFK	2	AVLAELPQQVVQYFK2	9137.76	11137.9	10852
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	AVLAESYER	AVLAESYER	2	AVLAESYER2	25100.7	21807	28684.9
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	AVLAPSAILQPR	AVLAPSAILQPR	2	AVLAPSAILQPR2	313385	365747	335377
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	AVLAQLGCPIK	AVLAQLGC(UniMod:4)PIK	2	AVLAQLGC(UniMod:4)PIK2	259297	283240	268630
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	AVLASTPR	AVLASTPR	2	AVLASTPR2	24677.3	40639.8	15759
F1LQ27	F1LQ27	F1LQ27_RAT	Fam98c	Family with sequence similarity 98, member C	1	AVLCPIR	AVLC(UniMod:4)PIR	2	AVLC(UniMod:4)PIR2	10910.4	8691.62	6613.55
Q6RUV5	M0R5T4;Q6RUV5	RAC1_RAT	Rac1	Ras-related C3 botulinum toxin substrate 1	0	AVLCPPPVK	AVLC(UniMod:4)PPPVK	2	AVLC(UniMod:4)PPPVK2	1.42025e+06	1.15097e+06	1.3122e+06
Q6RUV5	M0R5T4;Q6RUV5	RAC1_RAT	Rac1	Ras-related C3 botulinum toxin substrate 1	0	AVLCPPPVKK	AVLC(UniMod:4)PPPVKK	2	AVLC(UniMod:4)PPPVKK2	37072	32411.6	31759.1
A0A8I6A1P8	A0A8I6A1P8	A0A8I6A1P8_RAT	Rac2	Rac family small GTPase 2	1	AVLCPQPTR	AVLC(UniMod:4)PQPTR	2	AVLC(UniMod:4)PQPTR2	142632	138186	134299
F1LZ05	F1LZ05	F1LZ05_RAT	Parp14	Poly [ADP-ribose] polymerase	1	AVLDAIEEFVQK	AVLDAIEEFVQK	2	AVLDAIEEFVQK2			3981.53
P34926	P34926;P15205	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	0	AVLDALLEGK	AVLDALLEGK	2	AVLDALLEGK2	14758	15116	24325.4
Q5PPL3	Q5PPL3	NSDHL_RAT	Nsdhl	Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating	1	AVLDANDPK	AVLDANDPK	2	AVLDANDPK2	16263.7	19940	18028.1
Q5PPL3	Q5PPL3	NSDHL_RAT	Nsdhl	Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating	1	AVLDANDPKK	AVLDANDPKK	2	AVLDANDPKK2	8782.89	10004.1	7127.37
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	AVLDHQQFDFVVR	AVLDHQQFDFVVR	3	AVLDHQQFDFVVR3	10862.1	22442.9	6480.4
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	AVLDSTNADGISALHQACIDENLEVVR	AVLDSTNADGISALHQAC(UniMod:4)IDENLEVVR	3	AVLDSTNADGISALHQAC(UniMod:4)IDENLEVVR3	22135.6	18767.5	31579.3
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	AVLDVAETGTEAAAATGVK	AVLDVAETGTEAAAATGVK	2	AVLDVAETGTEAAAATGVK2	752176	791375	765230
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	AVLDVAETGTEAAAATGVK	AVLDVAETGTEAAAATGVK	3	AVLDVAETGTEAAAATGVK3	320510	327342	360923
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	AVLDVAETGTEAAAATGVKFVPMSAK	AVLDVAETGTEAAAATGVKFVPMSAK	3	AVLDVAETGTEAAAATGVKFVPMSAK3	9897.05	12093.2	9620.72
P05544	P05544	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	1	AVLDVDETGTEATAATGVATVIR	AVLDVDETGTEATAATGVATVIR	3	AVLDVDETGTEATAATGVATVIR3	362313	327089	407837
P05544	P05544	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	1	AVLDVDETGTEATAATGVATVIRR	AVLDVDETGTEATAATGVATVIRR	3	AVLDVDETGTEATAATGVATVIRR3	5441.25	8454.54	5466.83
P05545	A0A0G2JSK1;P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	0	AVLDVDETGTEGAAATAVTAALK	AVLDVDETGTEGAAATAVTAALK	3	AVLDVDETGTEGAAATAVTAALK3	851121	751252	798346
A0A8I5ZKU9	A0A8I5ZKU9	A0A8I5ZKU9_RAT	Shmt1	Serine hydroxymethyltransferase	1	AVLEALGSCLNNK	AVLEALGSC(UniMod:4)LNNK	2	AVLEALGSC(UniMod:4)LNNK2	7723.53	6753.57	5946.06
D3ZZL3	D3ZZL3	D3ZZL3_RAT	Naglu	N-acetyl-alpha-glucosaminidase	1	AVLEAVPR	AVLEAVPR	2	AVLEAVPR2	51487.3	50353.2	57513.2
D3ZG57	D3ZG57	D3ZG57_RAT	Tor4a	Torsin family 4, member A	1	AVLEDGALVLQYHAR	AVLEDGALVLQYHAR	2	AVLEDGALVLQYHAR2	1502.03	703.472	
D3ZG57	D3ZG57	D3ZG57_RAT	Tor4a	Torsin family 4, member A	1	AVLEDGALVLQYHAR	AVLEDGALVLQYHAR	3	AVLEDGALVLQYHAR3	27117.5	30851	27414.6
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	AVLEDPMLK	AVLEDPMLK	2	AVLEDPMLK2		10947.1	
Q4V7D2	Q4V7D2	ROGDI_RAT	Rogdi	Protein rogdi homolog	1	AVLEEEFR	AVLEEEFR	2	AVLEEEFR2	4665.98	10386.3	3595.9
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	AVLEELMEATPPNLLAK	AVLEELMEATPPNLLAK	2	AVLEELMEATPPNLLAK2	6143.94	7948.11	8302.92
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	AVLEELMEATPPNLLAK	AVLEELMEATPPNLLAK	3	AVLEELMEATPPNLLAK3	7247.1	4948.03	8832.24
Q9ES53	Q9ES53	UFD1_RAT	Ufd1	Ubiquitin recognition factor in ER-associated degradation protein 1	1	AVLENALR	AVLENALR	2	AVLENALR2	53967.4	47495.7	37497.2
Q5U2R0	Q5U2R0	MAT2B_RAT	Mat2b	Methionine adenosyltransferase 2 subunit beta	1	AVLENNLGAAVLR	AVLENNLGAAVLR	2	AVLENNLGAAVLR2	13769.9	9047.39	17147.4
Q5U2R0	Q5U2R0	MAT2B_RAT	Mat2b	Methionine adenosyltransferase 2 subunit beta	1	AVLENNLGAAVLR	AVLENNLGAAVLR	3	AVLENNLGAAVLR3	2545.07		
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	AVLESTWPSR	AVLESTWPSR	2	AVLESTWPSR2	27290.7	22405.7	24017.5
P45592	P45592	COF1_RAT	Cfl1	Cofilin-1	1	AVLFCLSEDK	AVLFC(UniMod:4)LSEDK	2	AVLFC(UniMod:4)LSEDK2	910982	799045	757822
P45592	P45592	COF1_RAT	Cfl1	Cofilin-1	1	AVLFCLSEDKK	AVLFC(UniMod:4)LSEDKK	2	AVLFC(UniMod:4)LSEDKK2	135383	99838.3	116235
P45592	P45592	COF1_RAT	Cfl1	Cofilin-1	1	AVLFCLSEDKK	AVLFC(UniMod:4)LSEDKK	3	AVLFC(UniMod:4)LSEDKK3	1.14856e+06	1.03438e+06	1.01686e+06
P01026	P01026	CO3_RAT	C3	Complement C3	1	AVLFNYR	AVLFNYR	2	AVLFNYR2	4.448e+06	4.13422e+06	3.76926e+06
P01026	P01026	CO3_RAT	C3	Complement C3	1	AVLFNYREQEK	AVLFNYREQEK	3	AVLFNYREQEK3	61759.6	93559.2	70598
Q8K3R4	Q8K3R4	Q8K3R4_RAT	Adipoq	Adiponectin d	1	AVLFTYDQYQEK	AVLFTYDQYQEK	2	AVLFTYDQYQEK2	36906.9	29821.6	29627.5
Q4FZX7	Q4FZX7	SRPRB_RAT	Srprb	Signal recognition particle receptor subunit beta	1	AVLFVGLCDSGK	AVLFVGLC(UniMod:4)DSGK	2	AVLFVGLC(UniMod:4)DSGK2	33492.5	32277.6	38837.6
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	AVLGEVVLYSGAR	AVLGEVVLYSGAR	2	AVLGEVVLYSGAR2	45907.6	48317.9	44609.3
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	AVLGEVVLYSGAR	AVLGEVVLYSGAR	3	AVLGEVVLYSGAR3	6774.94	10061.2	6000.48
Q63060	Q63060;D3Z8F7	GLPK_RAT	Gk	Glycerol kinase	0	AVLGPLVGAVDQGTSSTR	AVLGPLVGAVDQGTSSTR	2	AVLGPLVGAVDQGTSSTR2	12784	9923.87	
Q63060	Q63060;D3Z8F7	GLPK_RAT	Gk	Glycerol kinase	0	AVLGPLVGAVDQGTSSTR	AVLGPLVGAVDQGTSSTR	3	AVLGPLVGAVDQGTSSTR3		2006.02	
Q5HZA4	Q5HZA4	LYSM1_RAT	Lysmd1	LysM and putative peptidoglycan-binding domain-containing protein 1	1	AVLGPVPLTR	AVLGPVPLTR	2	AVLGPVPLTR2	6894.35	5594.82	5704.86
Q7TSA0	Q7TSA0	MIRO2_RAT	Rhot2	Mitochondrial Rho GTPase 2	1	AVLHPTAPLYDPEAK	AVLHPTAPLYDPEAK	3	AVLHPTAPLYDPEAK3	7410.91	5141.13	18745.5
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	AVLHQETGFFLK	AVLHQETGFFLK	2	AVLHQETGFFLK2	3693.49		1051.54
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	AVLHQETGFFLK	AVLHQETGFFLK	3	AVLHQETGFFLK3	30940.4	37323.8	38222
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	AVLHVALR	AVLHVALR	2	AVLHVALR2	20497.6	13564.6	10195.8
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	AVLIAGQPGTGK	AVLIAGQPGTGK	2	AVLIAGQPGTGK2	97411.6	114543	131102
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	AVLIASTK	AVLIASTK	2	AVLIASTK2	8688.23	16190.5	15359.5
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	AVLIDKDQTPK	AVLIDKDQTPK	2	AVLIDKDQTPK2	6452.26		2516.47
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	AVLIDKDQTPK	AVLIDKDQTPK	3	AVLIDKDQTPK3	95781.8	98587.3	95966.4
A0A0G2K7U7	A0A0G2K7U7	A0A0G2K7U7_RAT	Ankrd27	Ankyrin repeat domain 27	1	AVLIEGNR	AVLIEGNR	2	AVLIEGNR2	9564.72	6262.91	5429.18
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	AVLIMYK	AVLIMYK	2	AVLIMYK2	246341	248769	243084
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	AVLIPHHK	AVLIPHHK	2	AVLIPHHK2	12884.3	9184.77	6673.07
P37727	P37727	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	1	AVLITDGSVLK	AVLITDGSVLK	2	AVLITDGSVLK2	26957.5	29760.2	30642.6
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	AVLITDQSILK	AVLITDQSILK	2	AVLITDQSILK2	20755.8	24052	26723.7
P20070	P20070	NB5R3_RAT	Cyb5r3	NADH-cytochrome b5 reductase 3	1	AVLKDPNDHTVCYLLFANQSEK	AVLKDPNDHTVC(UniMod:4)YLLFANQSEK	3	AVLKDPNDHTVC(UniMod:4)YLLFANQSEK3	20373.2	15272.9	20954.6
P20070	P20070	NB5R3_RAT	Cyb5r3	NADH-cytochrome b5 reductase 3	1	AVLKDPNDHTVCYLLFANQSEK	AVLKDPNDHTVC(UniMod:4)YLLFANQSEK	4	AVLKDPNDHTVC(UniMod:4)YLLFANQSEK4	129504	132085	140326
P60123	P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	1	AVLLAGPPGTGK	AVLLAGPPGTGK	2	AVLLAGPPGTGK2	284835	245776	273767
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	AVLLASDAEACTLEEVVER	AVLLASDAEAC(UniMod:4)TLEEVVER	3	AVLLASDAEAC(UniMod:4)TLEEVVER3	29908.2	28756.9	41295.6
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	AVLLDEDDDLWVELR	AVLLDEDDDLWVELR	2	AVLLDEDDDLWVELR2	99245.2	115042	74338.3
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	AVLLDEDDDLWVELR	AVLLDEDDDLWVELR	3	AVLLDEDDDLWVELR3	19149.7	12595.7	15396.8
P83888	P83888;A0A8I6A5N2	TBG1_RAT	Tubg1	Tubulin gamma-1 chain	0	AVLLDLEPR	AVLLDLEPR	2	AVLLDLEPR2	65775.2	44067.5	49644.9
A0A8I5Y8A9	A0A8I5Y8A9	A0A8I5Y8A9_RAT	Gltpd2	Glycolipid transfer protein domain containing 2	1	AVLLERPGTTPR	AVLLERPGTTPR	3	AVLLERPGTTPR3	22688	17820.5	18301.6
P29410	P29410	KAD2_RAT	Ak2	Adenylate kinase 2, mitochondrial	1	AVLLGPPGAGK	AVLLGPPGAGK	2	AVLLGPPGAGK2	347547	282144	330889
P48450	P48450	LSS_RAT	Lss	Lanosterol synthase	1	AVLLLQER	AVLLLQER	2	AVLLLQER2	11402.2	16936.7	20938.7
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	AVLLNLSTIELYGSNDPYRR	AVLLNLSTIELYGSNDPYRR	3	AVLLNLSTIELYGSNDPYRR3	28377.6	22705.3	23764.2
P58751	P58751	RELN_RAT	Reln	Reelin	1	AVLLQYSVNNGITWHVIAQHQPK	AVLLQYSVNNGITWHVIAQHQPK	4	AVLLQYSVNNGITWHVIAQHQPK4	7664.48	7527.17	
F1LUU1	F1LUU1	F1LUU1_RAT	Itga11	Integrin subunit alpha 11	1	AVLLSSGQEHCQR	AVLLSSGQEHC(UniMod:4)QR	3	AVLLSSGQEHC(UniMod:4)QR3	16970	23576.5	11941.8
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	AVLMITNR	AVLMITNR	2	AVLMITNR2	9951.07	7563.29	13447.2
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	AVLMMDSEK	AVLMMDSEK	2	AVLMMDSEK2	201680	112702	98508.9
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	AVLMMDSEKR	AVLMMDSEKR	2	AVLMMDSEKR2	9864.4	14988.1	13731.3
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	AVLMMDSEKR	AVLMMDSEKR	3	AVLMMDSEKR3	181869	209753	180264
A0A0U1RRV5	A0A0U1RRV5	A0A0U1RRV5_RAT	Cluh	Clustered mitochondria protein homolog	1	AVLMSER	AVLMSER	2	AVLMSER2	6840.17	12292.4	12723.7
B5DFC3	B5DFC3	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	1	AVLNPLCQVDYR	AVLNPLC(UniMod:4)QVDYR	2	AVLNPLC(UniMod:4)QVDYR2	32388.8	21866	26696.8
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	AVLNPTNADILIETK	AVLNPTNADILIETK	2	AVLNPTNADILIETK2	41938.1	38181.6	19752.1
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	AVLNPTNADILIETK	AVLNPTNADILIETK	3	AVLNPTNADILIETK3	3090.47	5180.22	4433.62
Q32PX6	Q32PX6	Q32PX6_RAT	Rhog	Ras homolog family member G	1	AVLNPTPIK	AVLNPTPIK	2	AVLNPTPIK2	147047	138153	141444
Q32PX6	Q32PX6	Q32PX6_RAT	Rhog	Ras homolog family member G	1	AVLNPTPIKR	AVLNPTPIKR	2	AVLNPTPIKR2	17728.8	14847.1	10443.5
B0BMY7	B0BMY7	B0BMY7_RAT	Twf2	Twinfilin actin-binding protein 2	1	AVLPLLDAQEPCYLLFR	AVLPLLDAQEPC(UniMod:4)YLLFR	3	AVLPLLDAQEPC(UniMod:4)YLLFR3	4081.35	5706.65	3507.9
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	AVLPQENEGSGSEPLITGTLK	AVLPQENEGSGSEPLITGTLK	3	AVLPQENEGSGSEPLITGTLK3	26195.5	29309.9	25131.5
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	AVLPQENEGSGSEPLITGTLKK	AVLPQENEGSGSEPLITGTLKK	3	AVLPQENEGSGSEPLITGTLKK3	15028.6	14594.4	11179.2
A0A8I5Y224	A0A8I5Y224	A0A8I5Y224_RAT	Adam9	ADAM metallopeptidase domain 9	1	AVLPQTR	AVLPQTR	2	AVLPQTR2	36848.9	29259.8	31945.4
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	AVLPVTCHR	AVLPVTC(UniMod:4)HR	2	AVLPVTC(UniMod:4)HR2	23569.6	16716.9	
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	AVLQAVSDGQWWK	AVLQAVSDGQWWK	2	AVLQAVSDGQWWK2	8243.02	6359.54	3638.26
A0A8I5ZN24	A0A8I5ZN24	A0A8I5ZN24_RAT	Dhrs7	Dehydrogenase/reductase 7	1	AVLQEFGK	AVLQEFGK	2	AVLQEFGK2	96469.7	108726	94778.7
Q5PQL5	Q5PQL5	PTSS1_RAT	Ptdss1	Phosphatidylserine synthase 1	1	AVLQFTPASWTYVR	AVLQFTPASWTYVR	2	AVLQFTPASWTYVR2	36906.9	43275.1	38415.2
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	AVLQQYQHLPSFR	AVLQQYQHLPSFR	3	AVLQQYQHLPSFR3	52765.7	58759.8	59111.7
P37136	P37136	ACES_RAT	Ache	Acetylcholinesterase	1	AVLQSGTPNGPWATVSAGEAR	AVLQSGTPNGPWATVSAGEAR	3	AVLQSGTPNGPWATVSAGEAR3			10361.3
Q8R4A1	Q8R4A1	ERO1A_RAT	Ero1a	ERO1-like protein alpha	1	AVLQWTK	AVLQWTK	2	AVLQWTK2	83966.5	88210.4	72335.9
P01355	P01355	CCKN_RAT	Cck	Cholecystokinin	1	AVLRPDSEPR	AVLRPDSEPR	3	AVLRPDSEPR3	43480.2	43174.8	37316
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	AVLSAVELLDK	AVLSAVELLDK	2	AVLSAVELLDK2	795862	802072	844269
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	AVLSAVELLDKSNQAELLPSK	AVLSAVELLDKSNQAELLPSK	3	AVLSAVELLDKSNQAELLPSK3	16628.1	47603.3	33308.5
D4ADS4	D4ADS4	D4ADS4_RAT	Mgst3	Microsomal glutathione S-transferase 3	1	AVLSKEYGFVLLTGAASFVMVLHLAINVGK	AVLSKEYGFVLLTGAASFVMVLHLAINVGK	4	AVLSKEYGFVLLTGAASFVMVLHLAINVGK4			15013.3
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	AVLSQFQADLENLEK	AVLSQFQADLENLEK	2	AVLSQFQADLENLEK2	214525	193194	161940
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	AVLSQFQADLENLEK	AVLSQFQADLENLEK	3	AVLSQFQADLENLEK3	100707	103720	94430.9
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	AVLSQFQADLENLEKEITAR	AVLSQFQADLENLEKEITAR	3	AVLSQFQADLENLEKEITAR3	41946.1	22752.2	21374.4
Q9JHY1	A0A8I6AER7;Q9JHY1	JAM1_RAT	F11r	Junctional adhesion molecule A	0	AVLTCSEHDGSPPSEYSWFK	AVLTC(UniMod:4)SEHDGSPPSEYSWFK	3	AVLTC(UniMod:4)SEHDGSPPSEYSWFK3	586577	581942	676715
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	AVLTEGTDVVIK	AVLTEGTDVVIK	2	AVLTEGTDVVIK2	17591.2	20547.2	19427.8
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	AVLTLDER	AVLTLDER	1	AVLTLDER1	940.116	1531.1	1548.02
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	AVLTLDER	AVLTLDER	2	AVLTLDER2	467470	464752	429664
D4AAT7	D4AAT7	NNRD_RAT	Naxd	ATP-dependent (S)-NAD(P)H-hydrate dehydratase	1	AVLTPNHVEFSR	AVLTPNHVEFSR	3	AVLTPNHVEFSR3	18694.7	9866.79	17259.8
D4A7F0	D4A7F0	D4A7F0_RAT	Ubr3	E3 ubiquitin-protein ligase	1	AVLTQVLTNQQSYK	AVLTQVLTNQQSYK	2	AVLTQVLTNQQSYK2	5406.84	3156.35	5679.75
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	AVLTVDHLCWR	AVLTVDHLC(UniMod:4)WR	3	AVLTVDHLC(UniMod:4)WR3	17786.4	23334.5	21870.6
B3DMA2	B3DMA2	ACD11_RAT	Acad11	Acyl-CoA dehydrogenase family member 11	1	AVLTVTQYR	AVLTVTQYR	2	AVLTVTQYR2	33310.5	28294.1	23033.6
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	AVLVDLEPGTMDSIR	AVLVDLEPGTMDSIR	2	AVLVDLEPGTMDSIR2	53778.2	57122.5	66541.7
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	AVLVDLEPGTMDSIR	AVLVDLEPGTMDSIR	3	AVLVDLEPGTMDSIR3	861209	1.06529e+06	1.08269e+06
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	AVLVDLEPGTMDSIRSSR	AVLVDLEPGTMDSIRSSR	3	AVLVDLEPGTMDSIRSSR3	20945.6	20322.2	37021.8
Q6P9T8	Q6P9T8;B4F7C2	TBB4B_RAT	Tubb4b	Tubulin beta-4B chain	0	AVLVDLEPGTMDSVR	AVLVDLEPGTMDSVR	2	AVLVDLEPGTMDSVR2	7.71092e+06	23914.4	7.84703e+06
Q6P9T8	Q6P9T8;B4F7C2	TBB4B_RAT	Tubb4b	Tubulin beta-4B chain	0	AVLVDLEPGTMDSVR	AVLVDLEPGTMDSVR	3	AVLVDLEPGTMDSVR3	361773	368194	392050
D3Z9Y3	D3Z9Y3	D3Z9Y3_RAT	Cerk	Ceramide kinase	1	AVLVPSTLR	AVLVPSTLR	2	AVLVPSTLR2	37489.8	28131.2	32335.1
P01026	P01026	CO3_RAT	C3	Complement C3	1	AVLVSFQSGYLFIQTDK	AVLVSFQSGYLFIQTDK	2	AVLVSFQSGYLFIQTDK2	17857.4	20357	15583.2
P29147	P29147	BDH_RAT	Bdh1	D-beta-hydroxybutyrate dehydrogenase, mitochondrial	1	AVLVTGCDSGFGFSLAK	AVLVTGC(UniMod:4)DSGFGFSLAK	2	AVLVTGC(UniMod:4)DSGFGFSLAK2	19376.2	3712.46	7736.48
P97874	P97874;A0A8I5ZWX0	GAK_RAT	Gak	Cyclin-G-associated kinase	0	AVLVVHPDK	AVLVVHPDK	2	AVLVVHPDK2	5754.51	4763.54	4102.39
Q2LC84	Q2LC84	NUMB_RAT	Numb	Protein numb homolog	1	AVLWVSADGLR	AVLWVSADGLR	2	AVLWVSADGLR2	40652.7	39931	33633.9
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	AVLYVVEEPECPK	AVLYVVEEPEC(UniMod:4)PK	2	AVLYVVEEPEC(UniMod:4)PK2	131899	90354.8	124659
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	AVLYVVEEPECPK	AVLYVVEEPEC(UniMod:4)PK	3	AVLYVVEEPEC(UniMod:4)PK3	8780.39	4497.66	3285.71
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	AVMEACALLPDLEILPSGDLTEIGEK	AVMEAC(UniMod:4)ALLPDLEILPSGDLTEIGEK	3	AVMEAC(UniMod:4)ALLPDLEILPSGDLTEIGEK3	9838	12546.9	9797.81
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	AVMEALRDEGFPIR	AVMEALRDEGFPIR	3	AVMEALRDEGFPIR3	36577	27881.1	41219.5
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	AVMEIADTSAEAMEAAR	AVMEIADTSAEAMEAAR	2	AVMEIADTSAEAMEAAR2	34927.4	32323.2	25025.9
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	AVMEIADTSAEAMEAAR	AVMEIADTSAEAMEAAR	3	AVMEIADTSAEAMEAAR3	16222.5	17453.4	10146.5
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	AVMEIADTSAEAMEAARK	AVMEIADTSAEAMEAARK	3	AVMEIADTSAEAMEAARK3		9977.66	
A0A8I6AKL8	A0A8I6AKL8	A0A8I6AKL8_RAT	Xpo5	Exportin 5	1	AVMEQIPEINK	AVMEQIPEINK	2	AVMEQIPEINK2	5250.75		
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	AVMHFLVNHVK	AVMHFLVNHVK	2	AVMHFLVNHVK2	8402.8	5080.38	
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	AVMHFLVNHVK	AVMHFLVNHVK	3	AVMHFLVNHVK3	46418.8	50155.9	39720.7
E9PT66	E9PT66	E9PT66_RAT	Sf3b3	Splicing factor 3b, subunit 3	1	AVMISAIEK	AVMISAIEK	2	AVMISAIEK2	751864	624328	891753
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	AVMLFKPLVSEPIHIHR	AVMLFKPLVSEPIHIHR	4	AVMLFKPLVSEPIHIHR4	7100.45	6352.66	13201.1
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	AVMNFVVR	AVMNFVVR	2	AVMNFVVR2	27542.3	25421.5	19744
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	AVMNSQQGIEYILSNQGYVR	AVMNSQQGIEYILSNQGYVR	3	AVMNSQQGIEYILSNQGYVR3	41832.4	55344.1	82202
Q6AY56	Q6AY56	TBA8_RAT	Tuba8	Tubulin alpha-8 chain	1	AVMVDLEPTVVDEVR	AVMVDLEPTVVDEVR	2	AVMVDLEPTVVDEVR2	692364	695535	707664
Q6AY56	Q6AY56	TBA8_RAT	Tuba8	Tubulin alpha-8 chain	1	AVMVDLEPTVVDEVR	AVMVDLEPTVVDEVR	3	AVMVDLEPTVVDEVR3	94645.4	99870.2	123283
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	AVMVSNVLLINK	AVMVSNVLLINK	2	AVMVSNVLLINK2	46823	41313.7	32466.8
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	AVNGFSWR	AVNGFSWR	2	AVNGFSWR2		5924.08	
F1M7L9	F1M7L9	PKP2_RAT	Pkp2	Plakophilin-2	1	AVNMLDADHVPLSK	AVNMLDADHVPLSK	2	AVNMLDADHVPLSK2	1343.83		3315.6
F1M7L9	F1M7L9	PKP2_RAT	Pkp2	Plakophilin-2	1	AVNMLDADHVPLSK	AVNMLDADHVPLSK	3	AVNMLDADHVPLSK3	16917.6	8999.74	11929.5
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	AVNQPCAPDR	AVNQPC(UniMod:4)APDR	2	AVNQPC(UniMod:4)APDR2	19517.7	11860.5	17799
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	AVNRADK	AVNRADK	2	AVNRADK2			5734.19
A0A8I5ZXZ9	A0A8I5ZXZ9	A0A8I5ZXZ9_RAT	Cars2	cysteine--tRNA ligase	1	AVNSILDLVHHANR	AVNSILDLVHHANR	4	AVNSILDLVHHANR4	5930.3	2968.47	
Q63635	Q63635	STX6_RAT	Stx6	Syntaxin-6	1	AVNTAQGLFQR	AVNTAQGLFQR	2	AVNTAQGLFQR2	24388.2	19303.4	11398
A0A8I6A678	A0A8I6A678	A0A8I6A678_RAT	Snx2	Sorting nexin-2	1	AVNTQALSGAGILR	AVNTQALSGAGILR	2	AVNTQALSGAGILR2	41428.7	36525.8	41043.7
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	AVNVYGTSEPSQESELTAVGEKPEEPK	AVNVYGTSEPSQESELTAVGEKPEEPK	3	AVNVYGTSEPSQESELTAVGEKPEEPK3	477632	527954	578893
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	AVNVYGTSEPSQESELTAVGEKPEEPK	AVNVYGTSEPSQESELTAVGEKPEEPK	4	AVNVYGTSEPSQESELTAVGEKPEEPK4	16003.3	23919.7	16811.9
Q4KLH3	Q4KLH3	OGRL1_RAT	Ogfrl1	Opioid growth factor receptor-like protein 1	1	AVNWQER	AVNWQER	2	AVNWQER2	49507.2	38722.9	46864.5
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	AVNYFSK	AVNYFSK	1	AVNYFSK1	13969.1	19682.7	7921.96
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	AVNYFSK	AVNYFSK	2	AVNYFSK2	1.39697e+06	1.5575e+06	1.68612e+06
M0RBL7	M0RBL7	M0RBL7_RAT	Tcaf2c	Protein FAM115C-like	1	AVPAPYYK	AVPAPYYK	2	AVPAPYYK2	18943	14271.5	29328.7
A0A0G2K4Y6	A0A0G2K4Y6	A0A0G2K4Y6_RAT	Haus6	Family with sequence similarity 29, member A	1	AVPDQLTSVPQK	AVPDQLTSVPQK	2	AVPDQLTSVPQK2	8492.74	11768.4	
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	AVPEGHEYYR	AVPEGHEYYR	3	AVPEGHEYYR3	12821.6	17951.9	28873.9
Q80Z29	Q80Z29	NAMPT_RAT	Nampt	Nicotinamide phosphoribosyltransferase	1	AVPEGSVIPR	AVPEGSVIPR	2	AVPEGSVIPR2	23968.1	35780.6	9008.82
A0A8I6AIV4	A0A8I5YB95;A0A8I6AIV4	A0A8I6AIV4_RAT	Dctn3l1	Dynactin 3-like 1	0	AVPEHAAR	AVPEHAAR	2	AVPEHAAR2			120620
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	AVPFASVANVVCGDEAESK	AVPFASVANVVC(UniMod:4)GDEAESK	2	AVPFASVANVVC(UniMod:4)GDEAESK2	388099	419026	398464
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	AVPFASVANVVCGDEAESK	AVPFASVANVVC(UniMod:4)GDEAESK	3	AVPFASVANVVC(UniMod:4)GDEAESK3	394812	383209	422996
F1M6C4	F1M6C4	F1M6C4_RAT	Arl15	ADP-ribosylation factor like GTPase 15	1	AVPFQNAVLNVK	AVPFQNAVLNVK	2	AVPFQNAVLNVK2	15808.1	19658.1	
D4AB01	D4AB01	D4AB01_RAT	Hint2	Histidine triad nucleotide binding protein 2	1	AVPGGAAPTIFSR	AVPGGAAPTIFSR	2	AVPGGAAPTIFSR2	82511.7	109496	98799.6
Q63065	Q63065	PDK1_RAT	Pdk1	[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial	1	AVPLAGFGYGLPISR	AVPLAGFGYGLPISR	2	AVPLAGFGYGLPISR2	18432.4	15010.9	17396.1
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	AVPLALALISVSNPR	AVPLALALISVSNPR	2	AVPLALALISVSNPR2	77739.5	89206.2	90169.8
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	AVPLALALISVSNPR	AVPLALALISVSNPR	3	AVPLALALISVSNPR3	50727.5	39455.2	61589
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	AVPLDAVTGLSVTSGR	AVPLDAVTGLSVTSGR	2	AVPLDAVTGLSVTSGR2	117003	116361	106131
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	AVPLDAVTGLSVTSGR	AVPLDAVTGLSVTSGR	3	AVPLDAVTGLSVTSGR3	9701.66	9318.29	10851
B2GV97	B2GV97	B2GV97_RAT	Sepsecs	O-phosphoseryl-tRNA(Sec) selenium transferase	1	AVPLGSVQTVSGHTFR	AVPLGSVQTVSGHTFR	3	AVPLGSVQTVSGHTFR3	9550.88	6299.82	14476.3
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	AVPLNASK	AVPLNASK	1	AVPLNASK1	19609.1	13842	9124.44
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	AVPLNASK	AVPLNASK	2	AVPLNASK2	722490	826038	886186
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	AVPMIEGYMFEEHEMIR	AVPMIEGYMFEEHEMIR	3	AVPMIEGYMFEEHEMIR3	20156.8	15295.6	9066.08
P21533	A0A0G2KBA1;P21533	RL6_RAT	Rpl6	Large ribosomal subunit protein eL6	0	AVPQLQGYLR	AVPQLQGYLR	2	AVPQLQGYLR2	133851	157687	83716.4
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	AVPSSSEGDVFDLK	AVPSSSEGDVFDLK	2	AVPSSSEGDVFDLK2	34426.1	47585.5	43757.8
O35509	O35509;P62494	RB11B_RAT	Rab11b	Ras-related protein Rab-11B	0	AVPTDEAR	AVPTDEAR	2	AVPTDEAR2	3.3117e+06	3.55864e+06	
F7FLA1	F7FLA1	F7FLA1_RAT	Slc35b2	Solute carrier family 35 member B2	1	AVPTEPAVQKV	AVPTEPAVQKV	2	AVPTEPAVQKV2	35988.3	41574.3	48639.5
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AVPTGDASK	AVPTGDASK	1	AVPTGDASK1			54865
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AVPTGDASK	AVPTGDASK	2	AVPTGDASK2			513115
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	AVPVGGTTVSLFGK	AVPVGGTTVSLFGK	2	AVPVGGTTVSLFGK2	42431.1	68259.5	41895.3
Q9JHX4	Q9JHX4	CASP8_RAT	Casp8	Caspase-8	1	AVPVPDETGLEQEHVLEEDSSSYK	AVPVPDETGLEQEHVLEEDSSSYK	3	AVPVPDETGLEQEHVLEEDSSSYK3	21141.5	10965.3	7631.25
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	AVPVPEPR	AVPVPEPR	2	AVPVPEPR2	44112.7	35741.5	37686
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	AVQADGQVK	AVQADGQVK	1	AVQADGQVK1	4408.6		
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	AVQADGQVK	AVQADGQVK	2	AVQADGQVK2	28494.5		6986.6
A0A0G2K528	A0A0G2K528	A0A0G2K528_RAT	Stx16	Syntaxin 16	1	AVQALPSR	AVQALPSR	2	AVQALPSR2	45873.9	56050.8	76784.6
A0A8I6A2B3	A0A8I6A2B3	A0A8I6A2B3_RAT	Guk1	guanylate kinase	1	AVQAMNR	AVQAMNR	2	AVQAMNR2			4462.02
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	AVQCLNTSSK	AVQC(UniMod:4)LNTSSK	2	AVQC(UniMod:4)LNTSSK2	46031.2	53264.6	52912.4
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	AVQEAIQVK	AVQEAIQVK	2	AVQEAIQVK2	7283.46	6605.92	2708.11
P23965	P23965	ECI1_RAT	Eci1	Enoyl-CoA delta isomerase 1, mitochondrial	1	AVQELWLR	AVQELWLR	2	AVQELWLR2	12944.6	15787.8	13491.2
Q6AYE2	Q6AYE2;Q5PPJ9	SHLB1_RAT	Sh3glb1	Endophilin-B1	0	AVQFTEEK	AVQFTEEK	2	AVQFTEEK2	83128.8	105274	99841.1
P97526	P97526	NF1_RAT	Nf1	Neurofibromin	1	AVQGCGAHPALR	AVQGC(UniMod:4)GAHPALR	3	AVQGC(UniMod:4)GAHPALR3		3005.38	8167.76
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	AVQGMLDFDYVCSR	AVQGMLDFDYVC(UniMod:4)SR	2	AVQGMLDFDYVC(UniMod:4)SR2	12768.8	15201.3	9197.22
D3Z9C0	D3Z9C0	D3Z9C0_RAT	Mios	Meiosis regulator for oocyte development	1	AVQGVTVDPYFHDR	AVQGVTVDPYFHDR	3	AVQGVTVDPYFHDR3	7010.21	8542.48	8490.12
P27139	P27139	CAH2_RAT	Ca2	Carbonic anhydrase 2	1	AVQHPDGLAVLGIFLK	AVQHPDGLAVLGIFLK	3	AVQHPDGLAVLGIFLK3	17304.6	37916.9	26482.9
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	AVQHSNVVINLIGR	AVQHSNVVINLIGR	2	AVQHSNVVINLIGR2	2971.89	3893.58	736.155
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	AVQHSNVVINLIGR	AVQHSNVVINLIGR	3	AVQHSNVVINLIGR3	91635.8	104420	104752
D4AB70	D4AB70	D4AB70_RAT	Edem3	alpha-1,2-Mannosidase	1	AVQIISHPFFGR	AVQIISHPFFGR	3	AVQIISHPFFGR3	7404.84	9502.12	6123.27
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	AVQLLLETSADNQHYYCDSLK	AVQLLLETSADNQHYYC(UniMod:4)DSLK	3	AVQLLLETSADNQHYYC(UniMod:4)DSLK3	15256	23640.2	10890.4
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	AVQLTQALDTNTVGALLAEK	AVQLTQALDTNTVGALLAEK	3	AVQLTQALDTNTVGALLAEK3	28580.1	17521.7	21547.4
F1LZ11	F1LZ11	F1LZ11_RAT	AABR07065814.2	Ig-like domain-containing protein	1	AVQLVESGGGLVQPK	AVQLVESGGGLVQPK	2	AVQLVESGGGLVQPK2	354585	333826	344335
F1LZ11	F1LZ11	F1LZ11_RAT	AABR07065814.2	Ig-like domain-containing protein	1	AVQLVESGGGLVQPK	AVQLVESGGGLVQPK	3	AVQLVESGGGLVQPK3	68927.8	50332	41333.3
A0A0G2K350	A0A0G2K350	A0A0G2K350_RAT	Napg	NSF attachment protein gamma	1	AVQLYQQTANVFENEER	AVQLYQQTANVFENEER	3	AVQLYQQTANVFENEER3	20003.6	13550.6	13647.8
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	AVQMDSLVPLGELTK	AVQMDSLVPLGELTK	2	AVQMDSLVPLGELTK2	343635	343778	357532
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	AVQMDSLVPLGELTK	AVQMDSLVPLGELTK	3	AVQMDSLVPLGELTK3	4926.44	5230.25	4798.49
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	AVQMGMSSVFFNK	AVQMGMSSVFFNK	2	AVQMGMSSVFFNK2	1502.49	6247.4	11563.1
A0A8I6A282	A0A8I6A282	A0A8I6A282_RAT	Antxr2	Anthrax toxin receptor	1	AVQPVGETYIHEGLK	AVQPVGETYIHEGLK	2	AVQPVGETYIHEGLK2	25926.1	20609	18972.2
A0A8I6A282	A0A8I6A282	A0A8I6A282_RAT	Antxr2	Anthrax toxin receptor	1	AVQPVGETYIHEGLK	AVQPVGETYIHEGLK	3	AVQPVGETYIHEGLK3	164870	218861	158828
B1WC88	B1WC88	CR032_RAT		UPF0729 protein C18orf32 homolog	1	AVQQLDNK	AVQQLDNK	2	AVQQLDNK2		38427.1	
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	AVQQVFEHILDVSK	AVQQVFEHILDVSK	2	AVQQVFEHILDVSK2	13788.9	11538.7	2578.28
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	AVQQVFEHILDVSK	AVQQVFEHILDVSK	3	AVQQVFEHILDVSK3	15483.6	25837.4	20837.7
Q6JP77	Q6JP77	AKA7G_RAT	Akap7	A-kinase anchor protein 7 isoforms delta and gamma	1	AVQQYLEETQNK	AVQQYLEETQNK	2	AVQQYLEETQNK2	1113.58	2501.92	
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	AVQSEDDARQDVIQDVEISR	AVQSEDDARQDVIQDVEISR	3	AVQSEDDARQDVIQDVEISR3	6319.11	7453.22	14601.4
Q4KLF8	Q4KLF8	ARPC5_RAT	Arpc5	Actin-related protein 2/3 complex subunit 5	1	AVQSLDK	AVQSLDK	1	AVQSLDK1	2643.38	4051.64	
M0RAK0	M0RAK0	M0RAK0_RAT	Proser2	Proline and serine rich 2	1	AVQTEQPPALANGFQSVHEALR	AVQTEQPPALANGFQSVHEALR	3	AVQTEQPPALANGFQSVHEALR3	25135	29322.6	25770.2
P82808	P82808	GFPT1_RAT	Gfpt1	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1	1	AVQTLQMELQQIMK	AVQTLQMELQQIMK	2	AVQTLQMELQQIMK2	1088.72	2699.82	5736.19
A0A8I6AC38	A0A8I6AC38	A0A8I6AC38_RAT	Wnk2	non-specific serine/threonine protein kinase	1	AVQTQQPCSVR	AVQTQQPC(UniMod:4)SVR	2	AVQTQQPC(UniMod:4)SVR2	2168.01	2765.79	
B5DF93	B5DF93	PATL1_RAT	Patl1	Protein PAT1 homolog 1	1	AVQTRPVLQPQPGSLNSSIWDGSEVLR	AVQTRPVLQPQPGSLNSSIWDGSEVLR	3	AVQTRPVLQPQPGSLNSSIWDGSEVLR3	19751.9	22984.4	14187.3
B5DF93	B5DF93	PATL1_RAT	Patl1	Protein PAT1 homolog 1	1	AVQTRPVLQPQPGSLNSSIWDGSEVLRR	AVQTRPVLQPQPGSLNSSIWDGSEVLRR	4	AVQTRPVLQPQPGSLNSSIWDGSEVLRR4		15996.5	3146.74
Q5FVC7	Q5FVC7	ACAP2_RAT	Acap2	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2	1	AVQTSIATAYR	AVQTSIATAYR	2	AVQTSIATAYR2	14133.6	17118.5	8235.92
Q5FWT9	Q5FWT9	SIKE1_RAT	Sike1	Suppressor of IKBKE 1	1	AVQVDDNQFCK	AVQVDDNQFC(UniMod:4)K	2	AVQVDDNQFC(UniMod:4)K2	17600.2	11117.4	13239.3
Q91XU8	Q91XU8	CDS2_RAT	Cds2	Phosphatidate cytidylyltransferase 2	1	AVREDAPPEDKESESEAK	AVREDAPPEDKESESEAK	3	AVREDAPPEDKESESEAK3			20610.6
Q91XU8	Q91XU8	CDS2_RAT	Cds2	Phosphatidate cytidylyltransferase 2	1	AVREDAPPEDKESESEAK	AVREDAPPEDKESESEAK	4	AVREDAPPEDKESESEAK4	162732		124090
Q0Z843	Q0Z843	Q0Z843_RAT	Fig4	FIG4 phosphoinositide 5-phosphatase	1	AVSAFGVVGFVR	AVSAFGVVGFVR	2	AVSAFGVVGFVR2	4082.43		2310.11
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	AVSAIHSLLSSHDLDPR	AVSAIHSLLSSHDLDPR	3	AVSAIHSLLSSHDLDPR3	54857.7	59641.4	50762
Q6AY78	Q6AY78	S22AI_RAT	Slc22a18	Solute carrier family 22 member 18	1	AVSASDTGTMLGLCASVHPLTR	AVSASDTGTMLGLC(UniMod:4)ASVHPLTR	3	AVSASDTGTMLGLC(UniMod:4)ASVHPLTR3	1737.97		
A0A8I6AU21	A0A8I6AU21	A0A8I6AU21_RAT	Ccdc28a	Coiled-coil domain containing 28A	1	AVSDANLDR	AVSDANLDR	2	AVSDANLDR2	41064.4		39313.3
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	AVSEEGTSVLVHCSDGWDR	AVSEEGTSVLVHC(UniMod:4)SDGWDR	3	AVSEEGTSVLVHC(UniMod:4)SDGWDR3	60242.5	69429.2	56469
F1MAF5	F1MAF5	F1MAF5_RAT	Pcid2	PCI domain-containing protein 2	1	AVSEGNLLLLNEALAK	AVSEGNLLLLNEALAK	2	AVSEGNLLLLNEALAK2	2724.1		
D4A0J7	D4A0J7	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	1	AVSEGSDCQCK	AVSEGSDC(UniMod:4)QC(UniMod:4)K	2	AVSEGSDC(UniMod:4)QC(UniMod:4)K2			2752.3
P30121	P30121	TIMP2_RAT	Timp2	Metalloproteinase inhibitor 2	1	AVSEKEVDSGNDIYGNPIKR	AVSEKEVDSGNDIYGNPIKR	4	AVSEKEVDSGNDIYGNPIKR4	3763.26	5240.38	4607.74
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	AVSERDTDFMSLQEELK	AVSERDTDFMSLQEELK	3	AVSERDTDFMSLQEELK3		2445.02	2757.46
Q8CG45	Q8CG45	ARK72_RAT	Akr7a2	Aflatoxin B1 aldehyde reductase member 2	1	AVSGAPLRPGTVLGTMEMGR	AVSGAPLRPGTVLGTMEMGR	3	AVSGAPLRPGTVLGTMEMGR3	41441.3	33869	40056.7
Q9ET64	Q9ET64	NSMA_RAT	Smpd2	Sphingomyelin phosphodiesterase 2	1	AVSGFHICCK	AVSGFHIC(UniMod:4)C(UniMod:4)K	3	AVSGFHIC(UniMod:4)C(UniMod:4)K3	25753.9	24861.5	31532.2
F1M8L9	F1M8L9	F1M8L9_RAT	Rapgef1	Rap guanine nucleotide exchange factor 1	1	AVSGSSLPVGINR	AVSGSSLPVGINR	2	AVSGSSLPVGINR2	2889.4	4441.08	
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	AVSHEDQFLLLDFHAHGR	AVSHEDQFLLLDFHAHGR	4	AVSHEDQFLLLDFHAHGR4	4358.11	5071.44	3852.03
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	AVSILGDEVFR	AVSILGDEVFR	2	AVSILGDEVFR2	24668.7	26601.5	35209.4
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	AVSIVGNEVFR	AVSIVGNEVFR	2	AVSIVGNEVFR2	24588.6	19751.3	32534.1
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	AVSKPMGGSAPAK	AVSKPMGGSAPAK	2	AVSKPMGGSAPAK2	20458.6		
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	AVSKPMGGSAPAK	AVSKPMGGSAPAK	3	AVSKPMGGSAPAK3	77782.4		94691.4
A0A8I5ZYB9	A0A8I5ZYB9	A0A8I5ZYB9_RAT	Lrrc32	Leucine rich repeat containing 32	1	AVSLEVLDLR	AVSLEVLDLR	2	AVSLEVLDLR2	67643	68537.1	67126.2
B2GUX8	B2GUX8	B2GUX8_RAT	Sh3bp5l	SH3 domain-binding protein 5	1	AVSMHNAAR	AVSMHNAAR	2	AVSMHNAAR2			11738
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	AVSNINTLLDK	AVSNINTLLDK	2	AVSNINTLLDK2	65735.1	56282.6	71316.7
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	AVSNLLSTQLTFQAIHKPR	AVSNLLSTQLTFQAIHKPR	3	AVSNLLSTQLTFQAIHKPR3	30857.5	25028.8	29729.8
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	AVSNLLSTQLTFQAIHKPR	AVSNLLSTQLTFQAIHKPR	4	AVSNLLSTQLTFQAIHKPR4	174988	161421	144142
A0A8I6G9F8	A0A8I6G9F8	A0A8I6G9F8_RAT	Wdr59	WD repeat domain 59	1	AVSPTEPTPR	AVSPTEPTPR	2	AVSPTEPTPR2	5441.79	5475.16	8164.55
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	AVSQGKTAGLVK	AVSQGKTAGLVK	2	AVSQGKTAGLVK2	5227.45	7820.16	7961.83
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	AVSQLIR	AVSQLIR	2	AVSQLIR2	35669.6	33299.1	33091.6
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AVSSAIAK	AVSSAIAK	1	AVSSAIAK1	62430.1	43073.1	48330.1
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	AVSSGLPHMIEELQR	AVSSGLPHMIEELQR	3	AVSSGLPHMIEELQR3	29913.8	37952.7	50672.8
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	AVSSLDLLGDFK	AVSSLDLLGDFK	2	AVSSLDLLGDFK2	43805.2	35851.6	48804.3
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	AVSSQMIGQK	AVSSQMIGQK	2	AVSSQMIGQK2	182502	169348	184714
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	AVSTCAHLFWSGR	AVSTC(UniMod:4)AHLFWSGR	3	AVSTC(UniMod:4)AHLFWSGR3	67486.7	53640	47808.2
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	AVSTEPTDAAVVPR	AVSTEPTDAAVVPR	2	AVSTEPTDAAVVPR2	306854	375857	271509
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	AVSTEPTDAAVVPR	AVSTEPTDAAVVPR	3	AVSTEPTDAAVVPR3	12646.9	12059.7	13759.2
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	AVSTLIDSLK	AVSTLIDSLK	2	AVSTLIDSLK2	5654.92	7962.56	7458.7
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	AVSTLIDSLKK	AVSTLIDSLKK	3	AVSTLIDSLKK3	30996.4	26689	18787.6
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	AVSTTFGSR	AVSTTFGSR	2	AVSTTFGSR2		18067.5	12534.2
Q80WF4	Q80WF4	T132A_RAT	Tmem132a	Transmembrane protein 132A	1	AVSVEAAVTPAEPYAR	AVSVEAAVTPAEPYAR	2	AVSVEAAVTPAEPYAR2		4032.84	
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	AVSVPEDR	AVSVPEDR	2	AVSVPEDR2	59385.2	57635.1	60859.8
A0A8I6GM43	A0A8I6GM43	A0A8I6GM43_RAT	Pbdc1	Polysaccharide biosynthesis domain containing 1	1	AVSVSVQDK	AVSVSVQDK	2	AVSVSVQDK2	78615.5	79286.6	50560.7
Q5XIK2	Q5XIK2	TMX2_RAT	Tmx2	Thioredoxin-related transmembrane protein 2	1	AVSWTFSEENVIR	AVSWTFSEENVIR	2	AVSWTFSEENVIR2	9238.49	10559.7	11768.8
Q9WUC4	Q9WUC4	ATOX1_RAT	Atox1	Copper transport protein ATOX1	1	AVSYLGPK	AVSYLGPK	2	AVSYLGPK2	48157.3	53501.5	58104
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	AVTCIAFSK	AVTC(UniMod:4)IAFSK	2	AVTC(UniMod:4)IAFSK2	78004.9	105312	81274.9
F7FG68	F7FG68	F7FG68_RAT	Syvn1	Synoviolin 1	1	AVTDAIMSR	AVTDAIMSR	2	AVTDAIMSR2	22774.1	15278.9	18691.1
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	AVTDEEPFLIFANR	AVTDEEPFLIFANR	2	AVTDEEPFLIFANR2	86445.8	130612	111784
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	AVTDEEPFLIFANR	AVTDEEPFLIFANR	3	AVTDEEPFLIFANR3	58110.6	69314.7	74512.6
M0R3V6	M0R3V6	M0R3V6_RAT	Smim5	Small integral membrane protein 5	1	AVTDFVEEIR	AVTDFVEEIR	2	AVTDFVEEIR2	29878.9	28885.6	32256.5
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AVTDSINQLITMCTQQAPGQK	AVTDSINQLITMC(UniMod:4)TQQAPGQK	3	AVTDSINQLITMC(UniMod:4)TQQAPGQK3	480852	467320	495618
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	AVTEETVK	AVTEETVK	2	AVTEETVK2	78571.2	67672.4	61391
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	AVTEGAQAVEEPSIC	AVTEGAQAVEEPSIC(UniMod:4)	2	AVTEGAQAVEEPSIC(UniMod:4)2	29876.9	33673.6	27751.9
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	AVTELNEPLSNEDR	AVTELNEPLSNEDR	2	AVTELNEPLSNEDR2	6.05802e+06	5.6683e+06	6.32659e+06
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	AVTELNEPLSNEDR	AVTELNEPLSNEDR	3	AVTELNEPLSNEDR3	300213	294219	318882
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	AVTELNEPLSNEDRNLLSVAYK	AVTELNEPLSNEDRNLLSVAYK	3	AVTELNEPLSNEDRNLLSVAYK3	828424	1.14219e+06	1.39923e+06
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	AVTELNEPLSNEDRNLLSVAYK	AVTELNEPLSNEDRNLLSVAYK	4	AVTELNEPLSNEDRNLLSVAYK4	829.452	3284.16	
Q9EPH8	B5DF80;D3ZSR2;Q9EPH8;D3ZAS7;G3V9N0	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	0	AVTEMNGR	AVTEMNGR	2	AVTEMNGR2		55248.1	
P68255	P68255	1433T_RAT	Ywhaq	14-3-3 protein theta	1	AVTEQGAELSNEER	AVTEQGAELSNEER	2	AVTEQGAELSNEER2	8608.43	8774.06	747233
P68255	P68255	1433T_RAT	Ywhaq	14-3-3 protein theta	1	AVTEQGAELSNEER	AVTEQGAELSNEER	3	AVTEQGAELSNEER3	307874	347249	384546
P35213	P35213	1433B_RAT	Ywhab	14-3-3 protein beta/alpha	1	AVTEQGHELSNEER	AVTEQGHELSNEER	2	AVTEQGHELSNEER2	235754	165695	185668
P35213	P35213	1433B_RAT	Ywhab	14-3-3 protein beta/alpha	1	AVTEQGHELSNEER	AVTEQGHELSNEER	3	AVTEQGHELSNEER3	4.37779e+06	4.4423e+06	4.6386e+06
F1M1H0	F1M1H0	F1M1H0_RAT	Dera	deoxyribose-phosphate aldolase	1	AVTFIDLTTLSGDDTFSNVQR	AVTFIDLTTLSGDDTFSNVQR	3	AVTFIDLTTLSGDDTFSNVQR3	8766.5	5968.28	4436.69
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	AVTGYNDPETGNIISLFQAMNK	AVTGYNDPETGNIISLFQAMNK	3	AVTGYNDPETGNIISLFQAMNK3		4670.62	5869.27
P51111	P51111	HD_RAT	Htt	Huntingtin	1	AVTHAIPALQPIVHDLFVLR	AVTHAIPALQPIVHDLFVLR	3	AVTHAIPALQPIVHDLFVLR3	8997.62	26180.5	15789.5
P51111	P51111	HD_RAT	Htt	Huntingtin	1	AVTHAIPALQPIVHDLFVLR	AVTHAIPALQPIVHDLFVLR	4	AVTHAIPALQPIVHDLFVLR4	72442.9	92298.3	71626.6
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	AVTIFIR	AVTIFIR	2	AVTIFIR2	276312	255420	239279
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	AVTIHNTHHLLVER	AVTIHNTHHLLVER	3	AVTIHNTHHLLVER3	8435.36		5793.83
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	AVTIHNTHHLLVER	AVTIHNTHHLLVER	4	AVTIHNTHHLLVER4	43629.2	23309.1	27552.3
Q5XFW6	Q5XFW6	WDR6_RAT	Wdr6	WD repeat-containing protein 6	1	AVTLAGSWR	AVTLAGSWR	2	AVTLAGSWR2	14382.8	20661.5	14626.3
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	AVTLHDQGTTQWADLSSQFYLR	AVTLHDQGTTQWADLSSQFYLR	3	AVTLHDQGTTQWADLSSQFYLR3	15748.9	7715.09	9178.19
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	AVTLHDQGTTQWADLSSQFYLREEDIGK	AVTLHDQGTTQWADLSSQFYLREEDIGK	4	AVTLHDQGTTQWADLSSQFYLREEDIGK4	35852.5	29643.7	29279
D4A5S6	D4A5S6	D4A5S6_RAT	Alg1	ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase	1	AVTLYDKPASFFK	AVTLYDKPASFFK	3	AVTLYDKPASFFK3	5846.57	7553.46	7600.42
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	AVTPLYPANQADIIFDITEGNLR	AVTPLYPANQADIIFDITEGNLR	3	AVTPLYPANQADIIFDITEGNLR3	129205	83744.2	64443
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	AVTPNGEIR	AVTPNGEIR	2	AVTPNGEIR2	112656	124462	121546
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	AVTPNQVQDLYDIMDK	AVTPNQVQDLYDIMDK	2	AVTPNQVQDLYDIMDK2	6490.46	3982.14	6103.06
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	AVTPNQVQDLYDIMDKEHAR	AVTPNQVQDLYDIMDKEHAR	4	AVTPNQVQDLYDIMDKEHAR4	9769.07	9733.76	9354.46
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	AVTPVPTK	AVTPVPTK	2	AVTPVPTK2	24086.1	34560.7	25638.1
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	AVTQALNR	AVTQALNR	2	AVTQALNR2	1.62633e+06	2.74254e+06	2.99301e+06
B2GV97	B2GV97	B2GV97_RAT	Sepsecs	O-phosphoseryl-tRNA(Sec) selenium transferase	1	AVTQLGSMLFTR	AVTQLGSMLFTR	2	AVTQLGSMLFTR2		15833.2	
P42930	P42930	HSPB1_RAT	Hspb1	Heat shock protein beta-1	1	AVTQSAEITIPVTFEAR	AVTQSAEITIPVTFEAR	2	AVTQSAEITIPVTFEAR2			3244.33
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	AVTSEIAVLQSR	AVTSEIAVLQSR	2	AVTSEIAVLQSR2	404093	390039	388585
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	AVTSEIAVLQSR	AVTSEIAVLQSR	3	AVTSEIAVLQSR3	33884.4	29222	35719.4
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	AVTSISGPGEHLR	AVTSISGPGEHLR	2	AVTSISGPGEHLR2	5580.28	6468.97	2612.69
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	AVTSISGPGEHLR	AVTSISGPGEHLR	3	AVTSISGPGEHLR3	55762.3	55127.9	64819.7
B5DF48	B5DF48	B5DF48_RAT	Tyw1	tRNA 4-demethylwyosine synthase (AdoMet-dependent)	1	AVTSLDLPVAIINLK	AVTSLDLPVAIINLK	2	AVTSLDLPVAIINLK2		625.082	2437.51
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	AVTSVEER	AVTSVEER	2	AVTSVEER2	73494.8	78074.4	75774.1
Q9JHB5	Q9JHB5	TSNAX_RAT	Tsnax	Translin-associated protein X	1	AVTTGLQEYVEAVSFQHFIR	AVTTGLQEYVEAVSFQHFIR	3	AVTTGLQEYVEAVSFQHFIR3	10818.6	13347.9	4688.69
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	AVTTNQWHR	AVTTNQWHR	2	AVTTNQWHR2	10575.6	13008.8	4871.41
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	AVTVYTNYPFPGEAFNR	AVTVYTNYPFPGEAFNR	2	AVTVYTNYPFPGEAFNR2	12953.6	14300.7	9845.12
B5DFE0	B5DFE0	B5DFE0_RAT	Pals2	Membrane palmitoylated protein 6	1	AVVDAGITTK	AVVDAGITTK	2	AVVDAGITTK2	2651.35	4168.32	7244.47
Q7TPA5	Q7TPA5	SPA11_RAT	Serpina11	Serpin A11	1	AVVDMNEK	AVVDMNEK	2	AVVDMNEK2	12808.3	17172.8	19912.5
M0RCS2	M0RCS2	M0RCS2_RAT	Tbl2	Transducin (beta)-like 2	1	AVVEEMQGLLK	AVVEEMQGLLK	2	AVVEEMQGLLK2	22688.5	17352.6	16905.1
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	AVVEETSK	AVVEETSK	2	AVVEETSK2	17301		16403
A0A140UHX9	A0A140UHX9	A0A140UHX9_RAT	Ccz1	CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated	1	AVVEYQEEELLDK	AVVEYQEEELLDK	2	AVVEYQEEELLDK2	6579.79	4227.39	4534.67
Q4FZX7	Q4FZX7	SRPRB_RAT	Srprb	Signal recognition particle receptor subunit beta	1	AVVFVVDSATFQR	AVVFVVDSATFQR	2	AVVFVVDSATFQR2	28590.4	31289.4	24030.4
P62815	P62815	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	1	AVVGEEALTSDDLLYLEFLQK	AVVGEEALTSDDLLYLEFLQK	3	AVVGEEALTSDDLLYLEFLQK3	3455.39	5042.62	4126.53
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	AVVGNAVPCGAR	AVVGNAVPC(UniMod:4)GAR	2	AVVGNAVPC(UniMod:4)GAR2	20148.2	17249	19044
P62919	P62919;A0A8I6AGM6;D4A6W6	RL8_RAT	Rpl8	Large ribosomal subunit protein uL2	0	AVVGVVAGGGR	AVVGVVAGGGR	2	AVVGVVAGGGR2	42143.6	47763	40949.2
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	AVVHTHLLNPEWLVNYFGSLSVEDSLECLR	AVVHTHLLNPEWLVNYFGSLSVEDSLEC(UniMod:4)LR	4	AVVHTHLLNPEWLVNYFGSLSVEDSLEC(UniMod:4)LR4	38777.6	31520.5	32152.4
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	AVVISSAK	AVVISSAK	2	AVVISSAK2	478184	565068	478421
Q5FVM4	A0A8I6GFD8;Q5FVM4	NONO_RAT	Nono	Non-POU domain-containing octamer-binding protein	0	AVVIVDDR	AVVIVDDR	2	AVVIVDDR2	19042.3	4826.52	9162.02
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	AVVLAANHFGR	AVVLAANHFGR	3	AVVLAANHFGR3	220622	188971	192758
A1L1K3	A1L1K3	APC5_RAT	Anapc5	Anaphase-promoting complex subunit 5	1	AVVLQAQNQMTEAHK	AVVLQAQNQMTEAHK	3	AVVLQAQNQMTEAHK3	3887.35	3785.98	6070.73
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	AVVMDLLR	AVVMDLLR	2	AVVMDLLR2	21983.1	21340.8	21050.2
Q6AY20	Q6AY20	MPRD_RAT	M6pr	Cation-dependent mannose-6-phosphate receptor	1	AVVMISCNR	AVVMISC(UniMod:4)NR	2	AVVMISC(UniMod:4)NR2	141645	93522	96394.9
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	AVVMLEYVER	AVVMLEYVER	2	AVVMLEYVER2	14829.9	23411.8	12901.4
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	AVVNDATIFK	AVVNDATIFK	2	AVVNDATIFK2	28474.7	24060.8	17406.6
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	AVVNEDTQGNVSQLQAEVK	AVVNEDTQGNVSQLQAEVK	3	AVVNEDTQGNVSQLQAEVK3	1720.71	2297.59	1916.46
D3ZQL1	D3ZQL1	D3ZQL1_RAT	Emc7	ER membrane protein complex subunit 7	1	AVVPGVKPQDWISAAR	AVVPGVKPQDWISAAR	2	AVVPGVKPQDWISAAR2	7769.94	4828.14	6609.33
D3ZQL1	D3ZQL1	D3ZQL1_RAT	Emc7	ER membrane protein complex subunit 7	1	AVVPGVKPQDWISAAR	AVVPGVKPQDWISAAR	3	AVVPGVKPQDWISAAR3	151691	137749	153847
D4ACA1	D4ACA1	D4ACA1_RAT	Nxpe3	Neurexophilin and PC-esterase domain family, member 3	1	AVVQLLDR	AVVQLLDR	2	AVVQLLDR2	4983.96	8454.39	10221.9
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	AVVQTPGGR	AVVQTPGGR	2	AVVQTPGGR2	6294.38	9048.27	7887.96
P62815	P62815	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	1	AVVQVFEGTSGIDAK	AVVQVFEGTSGIDAK	2	AVVQVFEGTSGIDAK2	42354.3	35958.6	31055.3
Q920P0	Q920P0	DCXR_RAT	Dcxr	L-xylulose reductase	1	AVVQVSQIVAR	AVVQVSQIVAR	2	AVVQVSQIVAR2	10974.3	7340.85	16735.7
A8WCF8	A8WCF8	TPRGL_RAT	Tprg1l	Tumor protein p63-regulated gene 1-like protein	1	AVVRPVEDGEIQGVWLLTEVDHWNNEK	AVVRPVEDGEIQGVWLLTEVDHWNNEK	4	AVVRPVEDGEIQGVWLLTEVDHWNNEK4	20036.9	14655.4	20269.3
A8WCF8	A8WCF8	TPRGL_RAT	Tprg1l	Tumor protein p63-regulated gene 1-like protein	1	AVVRPVEDGEIQGVWLLTEVDHWNNEKER	AVVRPVEDGEIQGVWLLTEVDHWNNEKER	4	AVVRPVEDGEIQGVWLLTEVDHWNNEKER4	32800.2	30462.5	19104.4
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	AVVSGSMGNVAASPEQEAADSQECTQK	AVVSGSMGNVAASPEQEAADSQEC(UniMod:4)TQK	3	AVVSGSMGNVAASPEQEAADSQEC(UniMod:4)TQK3	1424.11	2975.19	3609.63
A0A8I6ABN1	A0A8I6ABN1	A0A8I6ABN1_RAT	Snx19	Sorting nexin 19	1	AVVSQELNK	AVVSQELNK	2	AVVSQELNK2	16028.9		13339.2
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	AVVSSPVK	AVVSSPVK	2	AVVSSPVK2	31970.2	22269.9	25383.2
A0A8I5ZKI9	A0A8I5ZKI9	A0A8I5ZKI9_RAT	Bicd1	BICD cargo adaptor 1	1	AVVTNVQAENER	AVVTNVQAENER	2	AVVTNVQAENER2	2447.52	2797.8	2364.27
P20673	P20673	ARLY_RAT	Asl	Argininosuccinate lyase	1	AVVVAEMK	AVVVAEMK	2	AVVVAEMK2	25108.2	25746.2	16150.8
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	AVVVAWER	AVVVAWER	2	AVVVAWER2	27513.9	35313.7	43862.4
Q6IMY8	Q6IMY8	HNRPU_RAT	Hnrnpu	Heterogeneous nuclear ribonucleoprotein U	1	AVVVCPK	AVVVC(UniMod:4)PK	2	AVVVC(UniMod:4)PK2	6974.68		
D3ZDK7	D3ZDK7	PGP_RAT	Pgp	Glycerol-3-phosphate phosphatase	1	AVVVGFDPHFSYMK	AVVVGFDPHFSYMK	3	AVVVGFDPHFSYMK3	10607.7	6632.54	8878.15
Q08420	Q08420	SODE_RAT	Sod3	Extracellular superoxide dismutase [Cu-Zn]	1	AVVVHAGEDDLGK	AVVVHAGEDDLGK	2	AVVVHAGEDDLGK2	12532.6	13123.5	11618.4
Q08420	Q08420	SODE_RAT	Sod3	Extracellular superoxide dismutase [Cu-Zn]	1	AVVVHAGEDDLGK	AVVVHAGEDDLGK	3	AVVVHAGEDDLGK3	232534	217051	214567
A0A0G2JYA3	A0A0G2JYA3	A0A0G2JYA3_RAT	Sppl2a	Signal peptide peptidase-like 2A	1	AVVVHWGPCHFLEK	AVVVHWGPC(UniMod:4)HFLEK	3	AVVVHWGPC(UniMod:4)HFLEK3	8534.77	5867.92	
A0A0G2JYA3	A0A0G2JYA3	A0A0G2JYA3_RAT	Sppl2a	Signal peptide peptidase-like 2A	1	AVVVHWGPCHFLEK	AVVVHWGPC(UniMod:4)HFLEK	4	AVVVHWGPC(UniMod:4)HFLEK4	7127.74	3353.03	5943.52
P97700	P97700	M2OM_RAT	Slc25a11	Mitochondrial 2-oxoglutarate/malate carrier protein	1	AVVVNAAQLASYSQSK	AVVVNAAQLASYSQSK	2	AVVVNAAQLASYSQSK2	17894.9	22170.3	24915.1
P97700	P97700	M2OM_RAT	Slc25a11	Mitochondrial 2-oxoglutarate/malate carrier protein	1	AVVVNAAQLASYSQSK	AVVVNAAQLASYSQSK	3	AVVVNAAQLASYSQSK3	19542.7	21462.9	19681.5
Q62651	Q62651	ECH1_RAT	Ech1	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial	1	AVVVSGAGK	AVVVSGAGK	2	AVVVSGAGK2	35411.9	28363.5	40782.3
D3ZJH9	A0A8I6AK15;D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	0	AVVVTDGER	AVVVTDGER	2	AVVVTDGER2	54880.4	52730.6	40606.7
P04897	P04897	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	1	AVVYSNTIQSIMAIVK	AVVYSNTIQSIMAIVK	2	AVVYSNTIQSIMAIVK2	532750	456849	432323
P04897	P04897	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	1	AVVYSNTIQSIMAIVK	AVVYSNTIQSIMAIVK	3	AVVYSNTIQSIMAIVK3	149925	140374	131622
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	AVVYSNTR	AVVYSNTR	2	AVVYSNTR2	25607.8	16070.8	16342.4
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	AVWDAFCANR	AVWDAFC(UniMod:4)ANR	2	AVWDAFC(UniMod:4)ANR2	32598.7	32545	42685.9
A0A8I6ANI3	A0A8I6ANI3	A0A8I6ANI3_RAT	Ctla2a	Cytotoxic T lymphocyte-associated protein 2 alpha	1	AVWEESK	AVWEESK	2	AVWEESK2	104448	135781	111221
A0A8I6ANI3	A0A8I6ANI3	A0A8I6ANI3_RAT	Ctla2a	Cytotoxic T lymphocyte-associated protein 2 alpha	1	AVWEESKK	AVWEESKK	2	AVWEESKK2	45627.6	43119.8	33908.9
P52303	P52303	AP1B1_RAT	Ap1b1	AP-1 complex subunit beta-1	1	AVWLPAMK	AVWLPAMK	2	AVWLPAMK2	142636	129485	154096
P62944	P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	AVWLPAVK	AVWLPAVK	2	AVWLPAVK2	147105	133501	129997
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	AVWMEDTK	AVWMEDTK	2	AVWMEDTK2	33002	35456.3	30091.6
A0A0G2JX20	A0A0G2JX20	A0A0G2JX20_RAT	Katnb1	Katanin p80 WD40 repeat-containing subunit B1	1	AVWTTGDIK	AVWTTGDIK	2	AVWTTGDIK2	6808.42	4009.49	
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	AVYCNSDIYLLDDPLSAVDAHVGK	AVYC(UniMod:4)NSDIYLLDDPLSAVDAHVGK	3	AVYC(UniMod:4)NSDIYLLDDPLSAVDAHVGK3	14878.1	8887.52	10703.2
B0BNM9	B0BNM9	GLTP_RAT	GLTP	Glycolipid transfer protein	1	AVYDTDPAK	AVYDTDPAK	2	AVYDTDPAK2	22758.7	24478.1	12189.8
G3V6Q3	G3V6Q3	G3V6Q3_RAT	Wdr13	Uncharacterized protein	1	AVYEDRPPGSVVPTSVAEASR	AVYEDRPPGSVVPTSVAEASR	3	AVYEDRPPGSVVPTSVAEASR3	19939.2	22723.6	26377.3
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	AVYENGFNTPR	AVYENGFNTPR	2	AVYENGFNTPR2	13958.1	16053	13884.5
G3V6R9	G3V6R9	G3V6R9_RAT	Bloc1s4	Biogenesis of lysosomal organelles complex 1 subunit 4	1	AVYEPPVLFR	AVYEPPVLFR	2	AVYEPPVLFR2	15360.1	24604.4	46161.7
O08654	O08654	PHAF1_RAT	Phaf1	Phagosome assembly factor 1	1	AVYFGDSCQDVLSMLGSPHK	AVYFGDSC(UniMod:4)QDVLSMLGSPHK	3	AVYFGDSC(UniMod:4)QDVLSMLGSPHK3	3593.29	2575.04	4120.51
Q66H63	Q66H63	GDAP2_RAT	Gdap2	Ganglioside-induced differentiation-associated-protein 2	1	AVYFVHPTFR	AVYFVHPTFR	3	AVYFVHPTFR3	52589.9	51789.1	36135.2
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	AVYHEEHFFYIHVDKR	AVYHEEHFFYIHVDKR	4	AVYHEEHFFYIHVDKR4		3417.65	4637.75
D4A3E8	D4A3E8	D4A3E8_RAT	Mrps27	Mitochondrial ribosomal protein S27	1	AVYHGMPLIWTPGYLDR	AVYHGMPLIWTPGYLDR	3	AVYHGMPLIWTPGYLDR3	8657.42	12623.1	12436.8
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	AVYIAPLK	AVYIAPLK	2	AVYIAPLK2	51253.5	54234.6	54906.4
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	AVYLGELSHDQDVVEYIMNQPNVVPR	AVYLGELSHDQDVVEYIMNQPNVVPR	4	AVYLGELSHDQDVVEYIMNQPNVVPR4	34833.6	35271.3	36681.1
P24594	P24594	IBP5_RAT	Igfbp5	Insulin-like growth factor-binding protein 5	1	AVYLPNCDR	AVYLPNC(UniMod:4)DR	2	AVYLPNC(UniMod:4)DR2	40855.2	40904.2	43601.6
P24594	P24594	IBP5_RAT	Igfbp5	Insulin-like growth factor-binding protein 5	1	AVYLPNCDRK	AVYLPNC(UniMod:4)DRK	3	AVYLPNC(UniMod:4)DRK3	64836.5	71304	63830.9
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	AVYMMPTEGDDSSK	AVYMMPTEGDDSSK	2	AVYMMPTEGDDSSK2	54769.5	40694	46629.7
Q9R1N3	Q9R1N3	S4A7_RAT	Slc4a7	Sodium bicarbonate cotransporter 3	1	AVYVGVHVPFSK	AVYVGVHVPFSK	3	AVYVGVHVPFSK3	7171.55		7475.61
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	AVYYTWADPVGSR	AVYYTWADPVGSR	2	AVYYTWADPVGSR2	71686.1	67183.3	82656.1
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	AWAEEPK	AWAEEPK	2	AWAEEPK2	29271.4	26785.2	27021
A0A8I5ZNI3	A0A8I5ZNI3	A0A8I5ZNI3_RAT	Glipr1	GLI pathogenesis-related 1	1	AWAQSCVFQHNPQLHSR	AWAQSC(UniMod:4)VFQHNPQLHSR	3	AWAQSC(UniMod:4)VFQHNPQLHSR3	41479.4	46866.2	37615.8
A0A8I5ZNI3	A0A8I5ZNI3	A0A8I5ZNI3_RAT	Glipr1	GLI pathogenesis-related 1	1	AWAQSCVFQHNPQLHSR	AWAQSC(UniMod:4)VFQHNPQLHSR	4	AWAQSC(UniMod:4)VFQHNPQLHSR4	104312	111004	70383.4
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	AWASIPFR	AWASIPFR	2	AWASIPFR2	112721	112986	93203.6
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	AWAYFSDVDLER	AWAYFSDVDLER	2	AWAYFSDVDLER2	31762.4	29996.2	25017.4
A0A8I6A6W3	A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	1	AWCVSCFACSTCNTK	AWC(UniMod:4)VSC(UniMod:4)FAC(UniMod:4)STC(UniMod:4)NTK	2	AWC(UniMod:4)VSC(UniMod:4)FAC(UniMod:4)STC(UniMod:4)NTK2	5991.74	6736.91	25630
A0A8I6A6W3	A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	1	AWCVSCFACSTCNTK	AWC(UniMod:4)VSC(UniMod:4)FAC(UniMod:4)STC(UniMod:4)NTK	3	AWC(UniMod:4)VSC(UniMod:4)FAC(UniMod:4)STC(UniMod:4)NTK3	8188.3	4069.5	15725.1
Q9ES40	Q9ES40	PRAF3_RAT	Arl6ip5	PRA1 family protein 3	1	AWDDFFPGSDR	AWDDFFPGSDR	2	AWDDFFPGSDR2	776878	845871	847721
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	AWDIAVATMK	AWDIAVATMK	2	AWDIAVATMK2	34511.5	32199.5	30270.4
F7EYK0	F7EYK0	F7EYK0_RAT	Fkbp5	peptidylprolyl isomerase	1	AWDIGVSTMK	AWDIGVSTMK	2	AWDIGVSTMK2	14907.5	10983.9	16138.9
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	AWDVEVQGSEQELSLHAAR	AWDVEVQGSEQELSLHAAR	3	AWDVEVQGSEQELSLHAAR3	19178.7	12485.7	18513.1
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	AWDVLLDHIQSAALSK	AWDVLLDHIQSAALSK	3	AWDVLLDHIQSAALSK3	40487.1	49891.1	45123.6
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	AWDVTVK	AWDVTVK	2	AWDVTVK2	35276.9	34990.9	33687.1
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	AWEDTLDGYCDR	AWEDTLDGYC(UniMod:4)DR	2	AWEDTLDGYC(UniMod:4)DR2	516729	363159	362285
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	AWEDTLDGYCDR	AWEDTLDGYC(UniMod:4)DR	3	AWEDTLDGYC(UniMod:4)DR3	6335.95	2994.94	
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	AWEDTLDGYCDRELAIK	AWEDTLDGYC(UniMod:4)DRELAIK	3	AWEDTLDGYC(UniMod:4)DRELAIK3	465186	416990	396469
P09811	P53534;P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	0	AWEITKK	AWEITKK	2	AWEITKK2	6115.78	5651.21	8339.95
A0A8I6G6W8	A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	AWENSPNLR	AWENSPNLR	2	AWENSPNLR2	18687.5		9281.7
F7ETC0	F7ETC0	F7ETC0_RAT	Smpd1	Sphingomyelin phosphodiesterase	1	AWEPWLPADALHTLR	AWEPWLPADALHTLR	3	AWEPWLPADALHTLR3	20601.9	21707.2	27502.7
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	AWESLEEAEYQR	AWESLEEAEYQR	2	AWESLEEAEYQR2	24376.2	21000.8	28081.3
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	AWEVDTCR	AWEVDTC(UniMod:4)R	2	AWEVDTC(UniMod:4)R2	474479	580515	499621
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	AWFEVGDENPGWSAQK	AWFEVGDENPGWSAQK	2	AWFEVGDENPGWSAQK2	134235	180876	159288
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	AWFEVGDENPGWSAQK	AWFEVGDENPGWSAQK	3	AWFEVGDENPGWSAQK3	11032.8	23338.1	12874.8
B2GUZ6	B2GUZ6	B2GUZ6_RAT	Rtn4ip1	Reticulon 4 interacting protein 1	1	AWGAHVTAVCSK	AWGAHVTAVC(UniMod:4)SK	3	AWGAHVTAVC(UniMod:4)SK3	5862.97	10405.4	4300.24
A0A0G2JXI6	A0A0G2JXI6	A0A0G2JXI6_RAT	Cyrib	CYFIP related Rac1 interactor B	1	AWGAVVPLVGK	AWGAVVPLVGK	2	AWGAVVPLVGK2	22545.2	25411.4	19793.3
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	AWGHPCEMCPAQPHPCR	AWGHPC(UniMod:4)EMC(UniMod:4)PAQPHPC(UniMod:4)R	3	AWGHPC(UniMod:4)EMC(UniMod:4)PAQPHPC(UniMod:4)R3	7484.71	13142.3	10820.3
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	AWGHPCEMCPAQPHPCR	AWGHPC(UniMod:4)EMC(UniMod:4)PAQPHPC(UniMod:4)R	4	AWGHPC(UniMod:4)EMC(UniMod:4)PAQPHPC(UniMod:4)R4	59755	89250.5	67739.4
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	AWGHPCEMCPAQPQPCR	AWGHPC(UniMod:4)EMC(UniMod:4)PAQPQPC(UniMod:4)R	3	AWGHPC(UniMod:4)EMC(UniMod:4)PAQPQPC(UniMod:4)R3	6479.56	5123.22	
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AWGPGLEGGIVGK	AWGPGLEGGIVGK	2	AWGPGLEGGIVGK2	8.30405e+06	8.62759e+06	8.92305e+06
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	AWGPQCEK	AWGPQC(UniMod:4)EK	1	AWGPQC(UniMod:4)EK1	5376.26	7659.8	5129.26
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	AWGPQCEK	AWGPQC(UniMod:4)EK	2	AWGPQC(UniMod:4)EK2	436412	408783	357868
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	AWGVPQDLIK	AWGVPQDLIK	2	AWGVPQDLIK2	17262.9	25100.8	
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	AWHGGCLALAELGR	AWHGGC(UniMod:4)LALAELGR	2	AWHGGC(UniMod:4)LALAELGR2	17395	13182.4	2640.6
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	AWHGGCLALAELGR	AWHGGC(UniMod:4)LALAELGR	3	AWHGGC(UniMod:4)LALAELGR3	51592.5	48695.6	42768.5
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	AWHPEHFLCR	AWHPEHFLC(UniMod:4)R	2	AWHPEHFLC(UniMod:4)R2	112180	97958.4	91055.8
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	AWHPEHFLCR	AWHPEHFLC(UniMod:4)R	3	AWHPEHFLC(UniMod:4)R3	249633	296203	233957
I6L9G5	I6L9G5	RCN3_RAT	Rcn3	Reticulocalbin-3	1	AWIAHTQQR	AWIAHTQQR	2	AWIAHTQQR2	32964.6	23799.7	24235.7
O35854	O35854	BCAT2_RAT	Bcat2	Branched-chain-amino-acid aminotransferase, mitochondrial	1	AWIGGVGDCK	AWIGGVGDC(UniMod:4)K	2	AWIGGVGDC(UniMod:4)K2	202295	178783	176583
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	AWISGFTGSAGTAVVTK	AWISGFTGSAGTAVVTK	2	AWISGFTGSAGTAVVTK2	44565.2	34238.9	32720.8
F1LYX9	F1LYX9	F1LYX9_RAT	Dsg2	Desmoglein 2	1	AWITAPVALR	AWITAPVALR	2	AWITAPVALR2	250770	162158	170319
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	AWKPSSK	AWKPSSK	1	AWKPSSK1	9320.12		3338.93
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	AWKPSSK	AWKPSSK	2	AWKPSSK2	14056.2		18888.3
Q9JJM7	Q9JJM7	GP1BB_RAT	Gp1bb	Platelet glycoprotein Ib beta chain	1	AWLAGRPER	AWLAGRPER	2	AWLAGRPER2	129490	125419	112952
A0A0G2JW29	D3ZR49;A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	0	AWLMSDK	AWLMSDK	2	AWLMSDK2	152723	182557	160165
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	AWLQDAHR	AWLQDAHR	2	AWLQDAHR2	35497.7	42544.7	37357.8
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	AWLSMAQK	AWLSMAQK	2	AWLSMAQK2	109605	128674	129529
D4A0G7	D4A0G7	D4A0G7_RAT	Rab37	RAB37, member RAS oncogene family	1	AWLTEIHEYAQR	AWLTEIHEYAQR	3	AWLTEIHEYAQR3	38306.8	33451.3	33399.8
P33568	P33568	RB_RAT	Rb1	Retinoblastoma-associated protein	1	AWLTWEK	AWLTWEK	2	AWLTWEK2	6933.57	13179.4	
Q9QY17	Q9QY17	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	1	AWMAVMSEAER	AWMAVMSEAER	2	AWMAVMSEAER2	116665	118126	120706
B0BN65	B0BN65	B0BN65_RAT	Cyria	CYFIP related Rac1 interactor A	1	AWNAVCPLVVR	AWNAVC(UniMod:4)PLVVR	2	AWNAVC(UniMod:4)PLVVR2	31260.6	34983.3	33112.3
P16446	P16446;P53812	PIPNA_RAT	Pitpna	Phosphatidylinositol transfer protein alpha isoform	0	AWNAYPYCR	AWNAYPYC(UniMod:4)R	2	AWNAYPYC(UniMod:4)R2	46323.8	47156.7	51599.7
Q5PQN6	Q5PQN6	SPE39_RAT	Vipas39	Spermatogenesis-defective protein 39 homolog	1	AWNDVDALFTTK	AWNDVDALFTTK	2	AWNDVDALFTTK2	12038.7	10587.9	
Q64057	Q64057	AL7A1_RAT	Aldh7a1	Alpha-aminoadipic semialdehyde dehydrogenase	1	AWNIWADIPAPK	AWNIWADIPAPK	2	AWNIWADIPAPK2	7161	8613.09	8852.97
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	AWNLICDVSR	AWNLIC(UniMod:4)DVSR	2	AWNLIC(UniMod:4)DVSR2	32921.1	44728.6	22994.4
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	AWNLICDVSREEFNK	AWNLIC(UniMod:4)DVSREEFNK	3	AWNLIC(UniMod:4)DVSREEFNK3	17297.6	27053.7	33296.8
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	AWNTMVLR	AWNTMVLR	2	AWNTMVLR2	153666	147995	149861
Q9QZH7	Q9QZH7	FXL20_RAT	Fbxl20	F-box/LRR-repeat protein 20	1	AWNVLALDGSNWQR	AWNVLALDGSNWQR	2	AWNVLALDGSNWQR2	7297.86	10742	9836.27
Q5BK21	Q5BK21	Q5BK21_RAT	Tm7sf2	Transmembrane 7 superfamily member 2	1	AWQEYCK	AWQEYC(UniMod:4)K	2	AWQEYC(UniMod:4)K2	4972.84	7601.31	4513.45
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	AWQTFIIDLLLHCHSK	AWQTFIIDLLLHC(UniMod:4)HSK	4	AWQTFIIDLLLHC(UniMod:4)HSK4	4093.69	5672.38	4550
D3ZSY8	D3ZSY8	D3ZSY8_RAT	Tbc1d10b	TBC1 domain family, member 10b	1	AWQYLSNSK	AWQYLSNSK	2	AWQYLSNSK2	61947.8	74505.6	64315.6
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	AWSDCPQIIK	AWSDC(UniMod:4)PQIIK	2	AWSDC(UniMod:4)PQIIK2	227035	224972	232160
Q1HCL7	Q1HCL7	NAKD2_RAT	Nadk2	NAD kinase 2, mitochondrial	1	AWSFNINR	AWSFNINR	2	AWSFNINR2	7542.37	8703.38	8064.96
Q64350	Q64350	EI2BE_RAT	Eif2b5	Translation initiation factor eIF-2B subunit epsilon	1	AWSPVFR	AWSPVFR	2	AWSPVFR2	79619.9	101287	68225.9
B2RYI2	B2RYI2	B2RYI2_RAT	Srp68	Signal recognition particle subunit SRP68	1	AWSYAMQLK	AWSYAMQLK	2	AWSYAMQLK2			4105.99
D3ZCD0	D3ZCD0	D3ZCD0_RAT	Tek	receptor protein-tyrosine kinase	1	AWTLSDILPPQPENIK	AWTLSDILPPQPENIK	2	AWTLSDILPPQPENIK2	5693.95	1830.77	2735.04
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	AWTQVLLGQAEDK	AWTQVLLGQAEDK	2	AWTQVLLGQAEDK2	141150	181434	129860
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	AWTQVLLGQAEDK	AWTQVLLGQAEDK	3	AWTQVLLGQAEDK3	6638.19	13896.1	13032.2
G3V6L9	G3V6L9	G3V6L9_RAT	Fkbp3	peptidylprolyl isomerase	1	AWTVEQLR	AWTVEQLR	2	AWTVEQLR2	13596.1	9618.4	21027.1
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	AWTVYQLPGQNVTLTCR	AWTVYQLPGQNVTLTC(UniMod:4)R	3	AWTVYQLPGQNVTLTC(UniMod:4)R3	5576.11	8338.45	12596.8
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	AWVNQLETQTGEASK	AWVNQLETQTGEASK	2	AWVNQLETQTGEASK2	42041.8	50883	48988.2
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	AWVNQLETQTGEASK	AWVNQLETQTGEASK	3	AWVNQLETQTGEASK3	5538.42	8521.07	4656.8
A0A8I5ZTU5	A0A8I5ZTU5	A0A8I5ZTU5_RAT	Ranbp1	RAN binding protein 1	1	AWVWNTHADFADECPKPELLAIR	AWVWNTHADFADEC(UniMod:4)PKPELLAIR	3	AWVWNTHADFADEC(UniMod:4)PKPELLAIR3	4720.23	1637.9	
A0A8I5ZTU5	A0A8I5ZTU5	A0A8I5ZTU5_RAT	Ranbp1	RAN binding protein 1	1	AWVWNTHADFADECPKPELLAIR	AWVWNTHADFADEC(UniMod:4)PKPELLAIR	4	AWVWNTHADFADEC(UniMod:4)PKPELLAIR4	28747.1	41343.3	26997.9
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	AWVYYSAVDVER	AWVYYSAVDVER	2	AWVYYSAVDVER2	436595	7.59144e+06	6.86919e+06
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	AWVYYSAVDVER	AWVYYSAVDVER	3	AWVYYSAVDVER3	214675	284874	236640
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	AWVYYSAVDVERDIHSGLIGPLLICR	AWVYYSAVDVERDIHSGLIGPLLIC(UniMod:4)R	4	AWVYYSAVDVERDIHSGLIGPLLIC(UniMod:4)R4	31100.2	21579.3	30511.4
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	AWVYYSAVDVERDIHSGLIGPLLICRK	AWVYYSAVDVERDIHSGLIGPLLIC(UniMod:4)RK	4	AWVYYSAVDVERDIHSGLIGPLLIC(UniMod:4)RK4		5040.98	
A0A0G2QC19	A0A0G2QC19	A0A0G2QC19_RAT	Dnajc21	DnaJ heat shock protein family (Hsp40) member C21	1	AWYDNHR	AWYDNHR	2	AWYDNHR2	5020.65	3308.85	
A0A8I6ANL9	A0A8I6ANL9	A0A8I6ANL9_RAT	Cdc23	Cell division cycle 23	1	AWYGLGQTYEILK	AWYGLGQTYEILK	2	AWYGLGQTYEILK2	3475.95	10565.2	9296.79
B2RYD7	B2RYD7	B2RYD7_RAT	Stt3b	dolichyl-diphosphooligosaccharide--protein glycotransferase	1	AWYPLGR	AWYPLGR	2	AWYPLGR2	269694	248830	263166
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	AYAALTDEESR	AYAALTDEESR	2	AYAALTDEESR2	6997.59	4093.13	7993.47
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	AYAALTDEESRK	AYAALTDEESRK	2	AYAALTDEESRK2	2628.86	647.48	
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	AYAALTDEESRK	AYAALTDEESRK	3	AYAALTDEESRK3	24794.6	29915.3	27174.5
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	AYAANSHQEQMLAQYVESFTQGSIEAHK	AYAANSHQEQMLAQYVESFTQGSIEAHK	4	AYAANSHQEQMLAQYVESFTQGSIEAHK4	7683.78	4912.71	6771.02
Q4V8B7	Q4V8B7	HSDL1_RAT	Hsdl1	Inactive hydroxysteroid dehydrogenase-like protein 1	1	AYAEELASHGLNIILISQEEEK	AYAEELASHGLNIILISQEEEK	3	AYAEELASHGLNIILISQEEEK3	97763.4	79909.3	89986.9
Q8VHF5	Q8VHF5	CISY_RAT	Cs	Citrate synthase, mitochondrial	1	AYAEGINR	AYAEGINR	2	AYAEGINR2	693473	699132	733416
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	AYALAFAER	AYALAFAER	2	AYALAFAER2	98795.2	102134	114100
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	AYALCVLFR	AYALC(UniMod:4)VLFR	2	AYALC(UniMod:4)VLFR2	6898.64	5124.31	
Q9QY17	Q9QY17	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	1	AYAQQLTEWAR	AYAQQLTEWAR	2	AYAQQLTEWAR2	91119.4	77498.1	85514
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	AYASGNVK	AYASGNVK	1	AYASGNVK1	3058.87		1786.36
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	AYATLILDSIK	AYATLILDSIK	2	AYATLILDSIK2		5441.38	
A0A8J8YNE4	A0A8J8YNE4	A0A8J8YNE4_RAT	Apool	MICOS complex subunit	1	AYATSHQIFQAIK	AYATSHQIFQAIK	2	AYATSHQIFQAIK2	953.799	1656.13	1874.04
A0A8J8YNE4	A0A8J8YNE4	A0A8J8YNE4_RAT	Apool	MICOS complex subunit	1	AYATSHQIFQAIK	AYATSHQIFQAIK	3	AYATSHQIFQAIK3	74910.7	75766.2	83081.6
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	AYATSPTSITVTWETPLSGNGEIQNYK	AYATSPTSITVTWETPLSGNGEIQNYK	3	AYATSPTSITVTWETPLSGNGEIQNYK3	16326.8	11453.3	13472.9
A0A8I6ANL9	A0A8I6ANL9	A0A8I6ANL9_RAT	Cdc23	Cell division cycle 23	1	AYAVGDVEK	AYAVGDVEK	2	AYAVGDVEK2	25369.1	19245.6	23427.3
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	AYAVLLTTGEAGQPSTDVLK	AYAVLLTTGEAGQPSTDVLK	3	AYAVLLTTGEAGQPSTDVLK3	195895	163915	154447
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	AYAVVCDCK	AYAVVC(UniMod:4)DC(UniMod:4)K	2	AYAVVC(UniMod:4)DC(UniMod:4)K2	15497.6	18614.7	16837.5
P70541	P70541	EI2BG_RAT	Eif2b3	Translation initiation factor eIF-2B subunit gamma	1	AYDASLAMLMR	AYDASLAMLMR	2	AYDASLAMLMR2	21281.4	22802.8	25108.4
B0BNE5	B0BNE5	ESTD_RAT	Esd	S-formylglutathione hydrolase	1	AYDATCLVK	AYDATC(UniMod:4)LVK	2	AYDATC(UniMod:4)LVK2	52453.8	42917.9	43451.8
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	AYDATTHFETTCDDIK	AYDATTHFETTC(UniMod:4)DDIK	3	AYDATTHFETTC(UniMod:4)DDIK3	10347.4		4115.02
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	AYDATTHFETTCDDIKDIYK	AYDATTHFETTC(UniMod:4)DDIKDIYK	3	AYDATTHFETTC(UniMod:4)DDIKDIYK3	5840.5	5660.72	7416.34
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	AYDATTHFETTCDDIKDIYK	AYDATTHFETTC(UniMod:4)DDIKDIYK	4	AYDATTHFETTC(UniMod:4)DDIKDIYK4	20939.8	16099.8	16359.8
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	AYDATTHFETTCDDIKDIYKR	AYDATTHFETTC(UniMod:4)DDIKDIYKR	4	AYDATTHFETTC(UniMod:4)DDIKDIYKR4	8194.69	1988.14	2396.3
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	AYDAVQLFALTGPAESK	AYDAVQLFALTGPAESK	2	AYDAVQLFALTGPAESK2	174749	165309	169850
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	AYDAVQLFALTGPAESK	AYDAVQLFALTGPAESK	3	AYDAVQLFALTGPAESK3	23595.4	23224.6	26159.8
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	AYDCMLQDPGSFNFAPR	AYDC(UniMod:4)MLQDPGSFNFAPR	3	AYDC(UniMod:4)MLQDPGSFNFAPR3	6559.97	12971	
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	AYDGLSLPEDTETVTASR	AYDGLSLPEDTETVTASR	2	AYDGLSLPEDTETVTASR2	12068.8	3943.36	8683.82
D4A0T0	D4A0T0	D4A0T0_RAT	Ndufb10	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10	1	AYDLVVDWPVTLVR	AYDLVVDWPVTLVR	2	AYDLVVDWPVTLVR2	38862.7	54208.1	45031.4
D4A0T0	D4A0T0	D4A0T0_RAT	Ndufb10	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10	1	AYDLVVDWPVTLVR	AYDLVVDWPVTLVR	3	AYDLVVDWPVTLVR3	5113.46	6267.8	8307.08
D3ZJR7	A0A0G2K230;D3ZJR7	D3ZJR7_RAT	Dsc2	Desmocollin 2	0	AYDPETK	AYDPETK	2	AYDPETK2	113551	113747	115165
Q63470	Q63470	DYR1A_RAT	Dyrk1a	Dual specificity tyrosine-phosphorylation-regulated kinase 1A	1	AYDRVEQEWVAIK	AYDRVEQEWVAIK	3	AYDRVEQEWVAIK3		8954.48	4358.7
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	AYDYLIQNTSFANR	AYDYLIQNTSFANR	2	AYDYLIQNTSFANR2	17617.1	13418.4	10622.8
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	AYDYLIQNTSFANR	AYDYLIQNTSFANR	3	AYDYLIQNTSFANR3	8347.43	8955.17	10969.5
P29411	P29411	KAD3_RAT	Ak3	GTP:AMP phosphotransferase AK3, mitochondrial	1	AYEAQTEPVLQYYQK	AYEAQTEPVLQYYQK	2	AYEAQTEPVLQYYQK2	26061.6	27354.2	11101.4
P29411	P29411	KAD3_RAT	Ak3	GTP:AMP phosphotransferase AK3, mitochondrial	1	AYEAQTEPVLQYYQK	AYEAQTEPVLQYYQK	3	AYEAQTEPVLQYYQK3	8547.76	5206.96	6430.17
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	AYECVVLLQSK	AYEC(UniMod:4)VVLLQSK	2	AYEC(UniMod:4)VVLLQSK2	5739.09	5966.66	4030.13
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	AYEFAER	AYEFAER	1	AYEFAER1	3772.88	3349.91	5810.97
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	AYEFAER	AYEFAER	2	AYEFAER2	1.39658e+06	1.56196e+06	1.66842e+06
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	AYEFLCTK	AYEFLC(UniMod:4)TK	2	AYEFLC(UniMod:4)TK2	10505.8	9663.02	8932.4
P37727	P37727	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	1	AYEGTTFSEYLK	AYEGTTFSEYLK	2	AYEGTTFSEYLK2	12255.6	8443.51	4232.79
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	AYELEQNVVK	AYELEQNVVK	2	AYELEQNVVK2	15454	20185	29856.1
Q64649	Q64649	KPB1_RAT	Phka1	Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform	1	AYELEQSVVK	AYELEQSVVK	2	AYELEQSVVK2	3172.58		9376.08
Q7TQ20	Q7TQ20	DNJC2_RAT	Dnajc2	DnaJ homolog subfamily C member 2	1	AYEMLSDPVK	AYEMLSDPVK	2	AYEMLSDPVK2		3840.53	
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	AYENAVSILSR	AYENAVSILSR	2	AYENAVSILSR2	14618.1	3349.45	16840.9
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	AYEPQELTPFVTAISSALVIAAVFDR	AYEPQELTPFVTAISSALVIAAVFDR	3	AYEPQELTPFVTAISSALVIAAVFDR3			3598.18
A0A0G2K350	A0A0G2K350	A0A0G2K350_RAT	Napg	NSF attachment protein gamma	1	AYEQAGMMLK	AYEQAGMMLK	2	AYEQAGMMLK2	41392.9	53737.8	46338.6
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	AYETVCQK	AYETVC(UniMod:4)QK	2	AYETVC(UniMod:4)QK2	9546	9943.68	13823.2
Q498R3	Q498R3	DJC10_RAT	Dnajc10	DnaJ homolog subfamily C member 10	1	AYEVLKDEDLR	AYEVLKDEDLR	3	AYEVLKDEDLR3	9168.42	6499.49	6926.28
D3ZL85	D3ZL85	D3ZL85_RAT	Hccs	Holocytochrome c-type synthase	1	AYEYVECPVTGAAAK	AYEYVEC(UniMod:4)PVTGAAAK	2	AYEYVEC(UniMod:4)PVTGAAAK2	4141.4	1911.58	6234.93
Q9WVR7	Q9WVR7	PPM1F_RAT	Ppm1f	Protein phosphatase 1F	1	AYFAVFDGHGGVDAAR	AYFAVFDGHGGVDAAR	3	AYFAVFDGHGGVDAAR3	15826.4	9515.61	10538.8
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	AYFETEK	AYFETEK	1	AYFETEK1	2903.31	1934.7	2217.89
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	AYFETEK	AYFETEK	2	AYFETEK2	143468	166660	171783
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	AYFETEKK	AYFETEKK	2	AYFETEKK2	24829.3	30518.5	33980.2
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	AYFGGEAR	AYFGGEAR	2	AYFGGEAR2	46284.1	45609.4	39656.8
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	AYFHLGINEK	AYFHLGINEK	3	AYFHLGINEK3	22096.3	30435.2	20577.5
Q63598	A0A0G2QC04;Q63598	PLST_RAT	Pls3	Plastin-3	0	AYFHLLNQIAPK	AYFHLLNQIAPK	2	AYFHLLNQIAPK2	22769.1	24715.1	15200.1
Q63598	A0A0G2QC04;Q63598	PLST_RAT	Pls3	Plastin-3	0	AYFHLLNQIAPK	AYFHLLNQIAPK	3	AYFHLLNQIAPK3	48847.8	30698.5	46508
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	AYFLDGSLLK	AYFLDGSLLK	2	AYFLDGSLLK2	23505.8	23256.8	21491.7
A0A8I6ANL9	A0A8I6ANL9	A0A8I6ANL9_RAT	Cdc23	Cell division cycle 23	1	AYFLYMYSR	AYFLYMYSR	2	AYFLYMYSR2	10668.5	16983	16293.5
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	AYFNGQSFIASTQK	AYFNGQSFIASTQK	2	AYFNGQSFIASTQK2		2795.58	6474.51
P04638	P04638	APOA2_RAT	Apoa2	Apolipoprotein A-II	1	AYFQNAQER	AYFQNAQER	2	AYFQNAQER2	34286.2	54773.4	38706.9
B5DF98	B5DF98	B5DF98_RAT	Map3k3	Mitogen activated protein kinase kinase kinase 3	1	AYGALTESVTR	AYGALTESVTR	2	AYGALTESVTR2		1455.47	2534.45
Q6VV72	Q6VV72;A0A8I6A8I7	IF1A_RAT	Eif1a	Eukaryotic translation initiation factor 1A	0	AYGELPEHAK	AYGELPEHAK	2	AYGELPEHAK2	19510.5	23524.1	19591.4
Q68FP9	Q68FP9	COG6_RAT	Cog6	Conserved oligomeric Golgi complex subunit 6	1	AYGEVHAAVMNPVNAYKDPESILHR	AYGEVHAAVMNPVNAYKDPESILHR	4	AYGEVHAAVMNPVNAYKDPESILHR4	4001.55	6631.03	4457.95
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	AYGFRDPGPQLR	AYGFRDPGPQLR	3	AYGFRDPGPQLR3	73690	162702	159380
P07633	P07633	PCCB_RAT	Pccb	Propionyl-CoA carboxylase beta chain, mitochondrial	1	AYGGAYDVMSSK	AYGGAYDVMSSK	2	AYGGAYDVMSSK2	28237.2	20814.9	21037.3
Q63372	Q63372	NRX1A_RAT	Nrxn1	Neurexin-1	1	AYGILMATTSR	AYGILMATTSR	2	AYGILMATTSR2	9172.17		
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	AYGLALAK	AYGLALAK	2	AYGLALAK2	174225	143025	122102
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AYGPGIEPTGNMVK	AYGPGIEPTGNMVK	2	AYGPGIEPTGNMVK2	6.90566e+06	7.23277e+06	7.51895e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AYGPGIEPTGNMVK	AYGPGIEPTGNMVK	3	AYGPGIEPTGNMVK3	94699.3	89680.4	89859.4
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	AYGPGIEPTGNMVKK	AYGPGIEPTGNMVKK	3	AYGPGIEPTGNMVKK3	27178.4	17733.8	31317.7
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	AYGSPWCNK	AYGSPWC(UniMod:4)NK	2	AYGSPWC(UniMod:4)NK2	6708.33	7825.55	7898.27
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	AYGTGFVGCLR	AYGTGFVGC(UniMod:4)LR	2	AYGTGFVGC(UniMod:4)LR2	8492.19		1664.44
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	AYGVDVGSPEISFAK	AYGVDVGSPEISFAK	2	AYGVDVGSPEISFAK2	38644.5	45052.6	32211
Q5XIF6	A0A8I6AF82;P68370;Q5XIF6;Q68FR8;Q6P9V9	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	AYHEQLSVAEITNACFEPANQMVK	AYHEQLSVAEITNAC(UniMod:4)FEPANQMVK	3	AYHEQLSVAEITNAC(UniMod:4)FEPANQMVK3	15541.7	23123.1	10320.8
Q5XIF6	A0A8I6AF82;P68370;Q5XIF6;Q68FR8;Q6P9V9	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	AYHEQLSVAEITNACFEPANQMVK	AYHEQLSVAEITNAC(UniMod:4)FEPANQMVK	4	AYHEQLSVAEITNAC(UniMod:4)FEPANQMVK4	132211	155531	159801
Q6AY56	Q6AY56	TBA8_RAT	Tuba8	Tubulin alpha-8 chain	1	AYHEQLSVAEITSSCFEPNSQMVK	AYHEQLSVAEITSSC(UniMod:4)FEPNSQMVK	3	AYHEQLSVAEITSSC(UniMod:4)FEPNSQMVK3	314693	329484	363344
Q6AYZ1	Q6AYZ1	TBA1C_RAT	Tuba1c	Tubulin alpha-1C chain	1	AYHEQLTVAEITNACFEPANQMVK	AYHEQLTVAEITNAC(UniMod:4)FEPANQMVK	3	AYHEQLTVAEITNAC(UniMod:4)FEPANQMVK3	615747	663946	644773
Q6AYZ1	Q6AYZ1	TBA1C_RAT	Tuba1c	Tubulin alpha-1C chain	1	AYHEQLTVAEITNACFEPANQMVK	AYHEQLTVAEITNAC(UniMod:4)FEPANQMVK	4	AYHEQLTVAEITNAC(UniMod:4)FEPANQMVK4	8792.11	6192.76	5933.33
D3ZF97	D3ZF97	D3ZF97_RAT	Erlec1	Endoplasmic reticulum lectin	1	AYHLQDDGTQTVR	AYHLQDDGTQTVR	2	AYHLQDDGTQTVR2	4010.32	2646.73	1152.79
D3ZF97	D3ZF97	D3ZF97_RAT	Erlec1	Endoplasmic reticulum lectin	1	AYHLQDDGTQTVR	AYHLQDDGTQTVR	3	AYHLQDDGTQTVR3	13962.7	20956.2	14622.8
Q56A18	Q56A18	SMCE1_RAT	Smarce1	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1	1	AYHNSPAYLAYINAK	AYHNSPAYLAYINAK	3	AYHNSPAYLAYINAK3	2961.6		
B1WC42	B1WC42	B1WC42_RAT	Trip6	Thyroid hormone receptor interactor 6	1	AYHPGCFTCVVCHR	AYHPGC(UniMod:4)FTC(UniMod:4)VVC(UniMod:4)HR	3	AYHPGC(UniMod:4)FTC(UniMod:4)VVC(UniMod:4)HR3	8521.02	5513.87	3573.16
B1WC42	B1WC42	B1WC42_RAT	Trip6	Thyroid hormone receptor interactor 6	1	AYHPGCFTCVVCHR	AYHPGC(UniMod:4)FTC(UniMod:4)VVC(UniMod:4)HR	4	AYHPGC(UniMod:4)FTC(UniMod:4)VVC(UniMod:4)HR4	10550.7	9999.74	5724.53
Q5XI07	Q5XI07	LPP_RAT	Lpp	Lipoma-preferred partner homolog	1	AYHPHCFTCVMCHR	AYHPHC(UniMod:4)FTC(UniMod:4)VMC(UniMod:4)HR	3	AYHPHC(UniMod:4)FTC(UniMod:4)VMC(UniMod:4)HR3	2570.71	1859.3	1488.32
Q5XI07	Q5XI07	LPP_RAT	Lpp	Lipoma-preferred partner homolog	1	AYHPHCFTCVMCHR	AYHPHC(UniMod:4)FTC(UniMod:4)VMC(UniMod:4)HR	4	AYHPHC(UniMod:4)FTC(UniMod:4)VMC(UniMod:4)HR4	15691.2	16101.9	14117.6
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	AYHVPDDK	AYHVPDDK	1	AYHVPDDK1	6737.49	4133.17	2198.76
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	AYHVPDDK	AYHVPDDK	2	AYHVPDDK2	68918.3	65275.8	64388.8
P58405	P58405	STRN3_RAT	Strn3	Striatin-3	1	AYIASAGADALAK	AYIASAGADALAK	2	AYIASAGADALAK2	71694.9	62486	71571.7
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	AYIAYELNSVQHR	AYIAYELNSVQHR	3	AYIAYELNSVQHR3	2068.16	4006.02	6965.73
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	AYICAHPLDR	AYIC(UniMod:4)AHPLDR	3	AYIC(UniMod:4)AHPLDR3	56921.8	35240.4	61006.8
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	AYIDSFR	AYIDSFR	2	AYIDSFR2	296254	314813	228738
A0A8I5ZTN5	A0A8I5ZTN5	A0A8I5ZTN5_RAT	Adsl	Adenylosuccinate lyase	1	AYIITGQTYTR	AYIITGQTYTR	2	AYIITGQTYTR2	11064.9	13471.4	8141.34
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	AYILNLVK	AYILNLVK	1	AYILNLVK1	6147.44	6140.87	9166.54
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	AYILNLVK	AYILNLVK	2	AYILNLVK2	341285	320888	344090
P01244	P01244	SOMA_RAT	Gh1	Somatotropin	1	AYIPEGQR	AYIPEGQR	2	AYIPEGQR2	18081.7	14994.9	
Q6P7C7	Q6P7C7	GPNMB_RAT	Gpnmb	Transmembrane glycoprotein NMB	1	AYIPISK	AYIPISK	2	AYIPISK2	95993.6	99435.7	106766
Q66H86	Q66H86	OLFL1_RAT	Olfml1	Olfactomedin-like protein 1	1	AYIQDFQEFSK	AYIQDFQEFSK	2	AYIQDFQEFSK2	24442.6	26042.5	27399.7
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	AYIQITFVEPYFDEYEMKDR	AYIQITFVEPYFDEYEMKDR	3	AYIQITFVEPYFDEYEMKDR3		7481.38	
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	AYIQITYVEPFFDTYEMKDR	AYIQITYVEPFFDTYEMKDR	3	AYIQITYVEPFFDTYEMKDR3	3936.37	4506.91	8803.79
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	AYIVEWR	AYIVEWR	2	AYIVEWR2	24997.9	17343	20942.2
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	AYKKELEEQLGPVAEETR	AYKKELEEQLGPVAEETR	3	AYKKELEEQLGPVAEETR3	17478.6	10852.7	24275.9
Q4V8B7	Q4V8B7	HSDL1_RAT	Hsdl1	Inactive hydroxysteroid dehydrogenase-like protein 1	1	AYLDHFSR	AYLDHFSR	2	AYLDHFSR2	50140.1	33765.4	48545.8
Q8K3E7	Q8K3E7	DPY30_RAT	Dpy30	Protein dpy-30 homolog	1	AYLDQTVVPILLQGLAVLAK	AYLDQTVVPILLQGLAVLAK	3	AYLDQTVVPILLQGLAVLAK3		4824.08	2172.46
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	AYLDSTER	AYLDSTER	2	AYLDSTER2	29253.3	32328.6	27213.9
Q6RJR6	Q6RJR6	RTN3_RAT	Rtn3	Reticulon-3	1	AYLDVDITLSSEAFHSYMNAAMVHVNK	AYLDVDITLSSEAFHSYMNAAMVHVNK	4	AYLDVDITLSSEAFHSYMNAAMVHVNK4	3216.45	4153.07	6298.13
Q63678	Q63678	ZA2G_RAT	Azgp1	Zinc-alpha-2-glycoprotein	1	AYLEEECPTMLK	AYLEEEC(UniMod:4)PTMLK	2	AYLEEEC(UniMod:4)PTMLK2	30646.4	34252.4	14129.4
Q63678	Q63678	ZA2G_RAT	Azgp1	Zinc-alpha-2-glycoprotein	1	AYLEEECPTMLKK	AYLEEEC(UniMod:4)PTMLKK	3	AYLEEEC(UniMod:4)PTMLKK3	19618.9	17869.8	28484.5
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	AYLESEVAISEELVQK	AYLESEVAISEELVQK	2	AYLESEVAISEELVQK2	38410.5	33196.8	21993.6
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	AYLESEVAISEELVQK	AYLESEVAISEELVQK	3	AYLESEVAISEELVQK3	26752.1	16039.1	15317.3
F7FFW7	F7FFW7	F7FFW7_RAT	Atp6v0d1	ATPase H+ transporting V0 subunit D1	1	AYLESFYK	AYLESFYK	2	AYLESFYK2	26567.4	29396.4	25893.5
A0A8I5ZS67	A0A8I5ZS67	A0A8I5ZS67_RAT	Gigyf2	GRB10 interacting GYF protein 2	1	AYLGDTSEAK	AYLGDTSEAK	2	AYLGDTSEAK2	11262.9	10985.1	15390.3
O70417	O70417	PIP_RAT	Pip	Prolactin-inducible protein homolog	1	AYLISNTPVDGGFNYIQTR	AYLISNTPVDGGFNYIQTR	3	AYLISNTPVDGGFNYIQTR3	64337.9	69080.8	76233.1
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	AYLLQNLNEEGSTEKPSQEK	AYLLQNLNEEGSTEKPSQEK	3	AYLLQNLNEEGSTEKPSQEK3	49483.7	60221.3	68793.7
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	AYLMEMYDI	AYLMEMYDI	2	AYLMEMYDI2	19741	28041.2	35128.1
Q8R4Z9	Q8R4Z9	MFN1_RAT	Mfn1	Mitofusin-1	1	AYLMTEGSDEK	AYLMTEGSDEK	2	AYLMTEGSDEK2	1308.17	2963.56	
D3ZFQ3	D3ZFQ3	D3ZFQ3_RAT	Nubpl	Nucleotide binding protein-like	1	AYLNIASEVVR	AYLNIASEVVR	2	AYLNIASEVVR2	12836	12706.6	12624.4
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	AYLNQTVLEFK	AYLNQTVLEFK	2	AYLNQTVLEFK2	17171.2	20742.4	17070.2
Q6AZ50	Q6AZ50	ATG3_RAT	Atg3	Ubiquitin-like-conjugating enzyme ATG3	1	AYLPTGK	AYLPTGK	1	AYLPTGK1	6311	7842.11	
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	AYLPVNESFGFTADLR	AYLPVNESFGFTADLR	2	AYLPVNESFGFTADLR2	42368	36957.1	33402.8
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	AYLPVNESFGFTADLR	AYLPVNESFGFTADLR	3	AYLPVNESFGFTADLR3	7417.78	7129.55	10077.9
B2GV73	B2GV73	B2GV73_RAT	Arpc3	Actin-related protein 2/3 complex subunit 3	1	AYLQQLR	AYLQQLR	2	AYLQQLR2	892727	804247	872285
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	AYLSIWTELQAYIK	AYLSIWTELQAYIK	2	AYLSIWTELQAYIK2		24100.3	14910.2
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	AYLSIWTELQAYIKEFHTTGLAWSK	AYLSIWTELQAYIKEFHTTGLAWSK	4	AYLSIWTELQAYIKEFHTTGLAWSK4			7418.04
A0A8I5ZLY6	A0A8I5ZLY6	A0A8I5ZLY6_RAT	RGD1564129	N-terminal Ras-GEF domain-containing protein	1	AYLTVNMPSSNLNLR	AYLTVNMPSSNLNLR	2	AYLTVNMPSSNLNLR2	3117.11	8402.27	4967.99
Q3B7D2	Q3B7D2	SPTC2_RAT	Sptlc2	Serine palmitoyltransferase 2	1	AYLYLDEAHSIGALGPSGR	AYLYLDEAHSIGALGPSGR	3	AYLYLDEAHSIGALGPSGR3	12637.3		
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	AYMCPLMTFIEGGR	AYMC(UniMod:4)PLMTFIEGGR	2	AYMC(UniMod:4)PLMTFIEGGR2	15550.5	19500.6	
A0A8I5ZZT4	A0A8I5ZZT4	A0A8I5ZZT4_RAT	Pstpip2	Proline-serine-threonine phosphatase-interacting protein 2	1	AYMLHINMLEK	AYMLHINMLEK	3	AYMLHINMLEK3	10500.3		
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	AYMQNPNAIILCIQDGSVDAER	AYMQNPNAIILC(UniMod:4)IQDGSVDAER	3	AYMQNPNAIILC(UniMod:4)IQDGSVDAER3	16606.2	20357.3	25951.9
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	AYNHHIQELQR	AYNHHIQELQR	3	AYNHHIQELQR3	4695.03	8122.77	
B5DFE0	B5DFE0	B5DFE0_RAT	Pals2	Membrane palmitoylated protein 6	1	AYNHYFDLIIVNDNLDK	AYNHYFDLIIVNDNLDK	3	AYNHYFDLIIVNDNLDK3			4121.75
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	AYNIHPHGIR	AYNIHPHGIR	2	AYNIHPHGIR2	15621	19446.7	11523.9
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	AYNIHPHGIR	AYNIHPHGIR	3	AYNIHPHGIR3	233275	189691	180031
P07633	P07633	PCCB_RAT	Pccb	Propionyl-CoA carboxylase beta chain, mitochondrial	1	AYNMLDIIHAVIDER	AYNMLDIIHAVIDER	3	AYNMLDIIHAVIDER3	2532.69	3021.29	
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	AYNYVGQEVDGYHAFQTLTQIYNK	AYNYVGQEVDGYHAFQTLTQIYNK	3	AYNYVGQEVDGYHAFQTLTQIYNK3	125656	155883	141734
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	AYPADAGK	AYPADAGK	2	AYPADAGK2	61346.6	72997.1	65189
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	AYPELTLAIFSEISQR	AYPELTLAIFSEISQR	2	AYPELTLAIFSEISQR2	6847.23	5481.77	2892.99
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	AYPELTLAIFSEISQR	AYPELTLAIFSEISQR	3	AYPELTLAIFSEISQR3			3293.3
Q5XIL2	Q5XIL2	P4K2B_RAT	Pi4k2b	Phosphatidylinositol 4-kinase type 2-beta	1	AYPFHWAWLPQAK	AYPFHWAWLPQAK	3	AYPFHWAWLPQAK3	4344.13	10524.7	6284.13
Q99M64	Q99M64	P4K2A_RAT	Pi4k2a	Phosphatidylinositol 4-kinase type 2-alpha	1	AYPFYWAWLPQAK	AYPFYWAWLPQAK	2	AYPFYWAWLPQAK2	3791.91		3677.26
Q5XI41	Q5XI41	TRAM1_RAT	Tram1	Translocating chain-associated membrane protein 1	1	AYPHNLMTFQMK	AYPHNLMTFQMK	3	AYPHNLMTFQMK3	27107.7	19023.3	11265.1
P20611	P20611	PPAL_RAT	Acp2	Lysosomal acid phosphatase	1	AYPKDPYQEEK	AYPKDPYQEEK	3	AYPKDPYQEEK3	36144.4	23940	22993.5
A0A8I5ZNI3	A0A8I5ZNI3	A0A8I5ZNI3_RAT	Glipr1	GLI pathogenesis-related 1	1	AYPPAGNMLYMSWDPK	AYPPAGNMLYMSWDPK	2	AYPPAGNMLYMSWDPK2	121312	123685	147649
A0A8I5ZNI3	A0A8I5ZNI3	A0A8I5ZNI3_RAT	Glipr1	GLI pathogenesis-related 1	1	AYPPAGNMLYMSWDPK	AYPPAGNMLYMSWDPK	3	AYPPAGNMLYMSWDPK3	4584.79	8703.85	8793.8
B0BNM1	B0BNM1	NNRE_RAT	Naxe	NAD(P)H-hydrate epimerase	1	AYPPTSMSK	AYPPTSMSK	2	AYPPTSMSK2	22002	29871.4	39979.6
Q5I0H9	Q5I0H9	PDIA5_RAT	Pdia5	Protein disulfide-isomerase A5	1	AYPTFHYYHYGK	AYPTFHYYHYGK	4	AYPTFHYYHYGK4	960.818	3449.56	5034.44
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	AYQEELSR	AYQEELSR	2	AYQEELSR2	44444.1	53904.1	67948.7
D4A7N1	D4A7N1	MIC25_RAT	Chchd6	MICOS complex subunit Mic25	1	AYQHCVSTAR	AYQHC(UniMod:4)VSTAR	3	AYQHC(UniMod:4)VSTAR3			2060.04
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	AYQLCSR	AYQLC(UniMod:4)SR	2	AYQLC(UniMod:4)SR2	5945.35		
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	AYQMDPTLR	AYQMDPTLR	2	AYQMDPTLR2	12559.7	16774.6	13892.2
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	AYQMDPTLRK	AYQMDPTLRK	2	AYQMDPTLRK2	1524.7	1292.39	2517.22
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	AYQMDPTLRK	AYQMDPTLRK	3	AYQMDPTLRK3	9269.7	16798.6	11159.7
Q68FQ9	Q68FQ9	Q68FQ9_RAT	Lancl2	LanC lantibiotic synthetase component C-like 2 (Bacterial)	1	AYQVFKEEK	AYQVFKEEK	2	AYQVFKEEK2		3401.39	2678.18
Q68FQ9	Q68FQ9	Q68FQ9_RAT	Lancl2	LanC lantibiotic synthetase component C-like 2 (Bacterial)	1	AYQVFKEEK	AYQVFKEEK	3	AYQVFKEEK3	14134.6	6322.06	14406.1
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	AYQWKPLYPDDYMHISSK	AYQWKPLYPDDYMHISSK	3	AYQWKPLYPDDYMHISSK3			3202.29
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	AYQWKPLYPDDYMHISSK	AYQWKPLYPDDYMHISSK	4	AYQWKPLYPDDYMHISSK4	6090.08	11184.2	15299.1
Q66H15	Q66H15	RMD3_RAT	Rmdn3	Regulator of microtubule dynamics protein 3	1	AYSDMTELTEEESEK	AYSDMTELTEEESEK	2	AYSDMTELTEEESEK2	3336.25	2210.67	4240.33
Q66H15	Q66H15	RMD3_RAT	Rmdn3	Regulator of microtubule dynamics protein 3	1	AYSDMTELTEEESEKK	AYSDMTELTEEESEKK	3	AYSDMTELTEEESEKK3	23350.6	22279	23845.3
P61983	P61983	1433G_RAT	Ywhag	14-3-3 protein gamma	1	AYSEAHEISK	AYSEAHEISK	2	AYSEAHEISK2		798547	
G3V6Q3	A0A8I5Y6K0;G3V6Q3	G3V6Q3_RAT	Wdr13	Uncharacterized protein	0	AYSNSIVR	AYSNSIVR	2	AYSNSIVR2	18999	19488.8	17547.1
P85171	P85171	MDGA1_RAT	Mdga1	MAM domain-containing glycosylphosphatidylinositol anchor protein 1	1	AYSPEFYFDTPNPTR	AYSPEFYFDTPNPTR	2	AYSPEFYFDTPNPTR2			4045.07
Q5XI72	Q5XI72	IF4H_RAT	Eif4h	Eukaryotic translation initiation factor 4H	1	AYSSFGGGR	AYSSFGGGR	2	AYSSFGGGR2	23064.1	18550.4	27190.7
P15087	P15087	CBPE_RAT	Cpe	Carboxypeptidase E	1	AYSSFNPVMSDPNRPPCR	AYSSFNPVMSDPNRPPC(UniMod:4)R	3	AYSSFNPVMSDPNRPPC(UniMod:4)R3	10425.9	8481.67	10132.5
Q6P6Q9	Q6P6Q9	MICU1_RAT	Micu1	Calcium uptake protein 1, mitochondrial	1	AYSTPDK	AYSTPDK	2	AYSTPDK2			18475.9
Q02353	Q02353;D3ZD27;D3ZD62;D4ABE3	NDST1_RAT	Ndst1	Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1	0	AYSWYQHQR	AYSWYQHQR	3	AYSWYQHQR3	8520.82	14934.3	8531.17
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	AYTEEDLDLVEK	AYTEEDLDLVEK	2	AYTEEDLDLVEK2	23215.1	11898.2	19871.4
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	AYTGREFDDLSPEQQR	AYTGREFDDLSPEQQR	3	AYTGREFDDLSPEQQR3	32727.5	38603	25412.2
Q9EPQ0	Q9EPQ0	NCKX3_RAT	Slc24a3	Sodium/potassium/calcium exchanger 3 (Fragment)	1	AYTNGESEVAIK	AYTNGESEVAIK	2	AYTNGESEVAIK2	4645.78	7322.61	
A0A8I5ZS17	A0A8I5ZS17	A0A8I5ZS17_RAT	Snx25	Sorting nexin 25	1	AYTYAPSYEEFIK	AYTYAPSYEEFIK	2	AYTYAPSYEEFIK2	5832.61	8064.79	
D3ZTX4	D3ZTX4	D3ZTX4_RAT	Mgam	Maltase-glucoamylase	1	AYVAFPDFFR	AYVAFPDFFR	2	AYVAFPDFFR2	21197		7966.07
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	AYVDDTPADEMK	AYVDDTPADEMK	2	AYVDDTPADEMK2	41544.6	34092.7	30858
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	AYVEFVNVSQCPLTALK	AYVEFVNVSQC(UniMod:4)PLTALK	2	AYVEFVNVSQC(UniMod:4)PLTALK2	16483.7	20983.2	22006.8
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	AYVEFVNVSQCPLTALK	AYVEFVNVSQC(UniMod:4)PLTALK	3	AYVEFVNVSQC(UniMod:4)PLTALK3	8289.81	8044.27	6339.03
B2RYP8	B2RYP8	B2RYP8_RAT	Tubgcp2	Gamma-tubulin complex component	1	AYVEQIEK	AYVEQIEK	2	AYVEQIEK2	8330.55	8116.2	4786.54
Q4KLI2	Q4KLI2	TM10A_RAT	Trmt10a	tRNA methyltransferase 10 homolog A	1	AYVIGGLVDHNHHK	AYVIGGLVDHNHHK	3	AYVIGGLVDHNHHK3	6369.73		
D4AB70	D4AB70	D4AB70_RAT	Edem3	alpha-1,2-Mannosidase	1	AYVLLGDDSFLER	AYVLLGDDSFLER	2	AYVLLGDDSFLER2	6082.79	10492.1	10056.1
D4AC36	D4AC36	D4AC36_RAT	Eif3f	Eukaryotic translation initiation factor 3 subunit F	1	AYVSTLMGVPGR	AYVSTLMGVPGR	2	AYVSTLMGVPGR2	109666	118217	125105
D3ZUM4	D3ZUM4	D3ZUM4_RAT	Glb1	Beta-galactosidase	1	AYVSVDGVPQGILDR	AYVSVDGVPQGILDR	2	AYVSVDGVPQGILDR2	48183.3	44266.2	56190.4
Q02589	Q02589	ADPRH_RAT	Adprh	ADP-ribosylhydrolase ARH1	1	AYVTQSGYFVK	AYVTQSGYFVK	2	AYVTQSGYFVK2	19193.4	15534.7	17894.2
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	AYVVEDNK	AYVVEDNK	2	AYVVEDNK2	22555.9	28371.1	26556.1
Q5EB73	Q5EB73	PGAP4_RAT	Pgap4	Post-GPI attachment to proteins factor 4	1	AYVVEPNLVK	AYVVEPNLVK	2	AYVVEPNLVK2	6176.39	6385.07	11955
Q9R1T1	Q9R1T1	BAF_RAT	Banf1	Barrier-to-autointegration factor	1	AYVVLGQFLVLK	AYVVLGQFLVLK	2	AYVVLGQFLVLK2	11865.4	15936.1	8654.9
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	AYVWDNNK	AYVWDNNK	2	AYVWDNNK2	10561.1	8004.28	8994.12
P24268	P24268	CATD_RAT	Ctsd	Cathepsin D	1	AYWQVHMDQLEVGSELTLCK	AYWQVHMDQLEVGSELTLC(UniMod:4)K	3	AYWQVHMDQLEVGSELTLC(UniMod:4)K3	7690.51	12114.7	17907.7
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	AYYHLLEQVAPR	AYYHLLEQVAPR	2	AYYHLLEQVAPR2	4384.42	4396.54	
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	AYYHLLEQVAPR	AYYHLLEQVAPR	3	AYYHLLEQVAPR3	43898.8	43811.1	49388.7
Q9QUR2	Q9QUR2	DCTN4_RAT	Dctn4	Dynactin subunit 4	1	AYYLACGFCR	AYYLAC(UniMod:4)GFC(UniMod:4)R	2	AYYLAC(UniMod:4)GFC(UniMod:4)R2	29754.5	33820.9	44037.6
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	AYYLTENDMER	AYYLTENDMER	2	AYYLTENDMER2	18423.6	21344	
P47853	P47853	PGS1_RAT	Bgn	Biglycan	1	AYYNGISLFNNPVPYWEVQPATFR	AYYNGISLFNNPVPYWEVQPATFR	3	AYYNGISLFNNPVPYWEVQPATFR3		7007.99	9540.79
Q9Z1K9	Q9Z1K9	ADA17_RAT	Adam17	Disintegrin and metalloproteinase domain-containing protein 17	1	AYYNPGVK	AYYNPGVK	2	AYYNPGVK2	17952	18293.8	11379.7
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	AYYPSIVANR	AYYPSIVANR	2	AYYPSIVANR2	37705.6	24807	37445.2
A0A0G2K5E4	A0A0G2K5E4	A0A0G2K5E4_RAT	Dnaja3	DnaJ heat shock protein family (Hsp40) member A3	1	AYYQLAK	AYYQLAK	2	AYYQLAK2	23138.5	21971	22719.6
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	CAAAEAWAR	C(UniMod:4)AAAEAWAR	2	C(UniMod:4)AAAEAWAR2	73365.1	70111.4	79316.7
P62959	A0A8I6AVX1;P62959	HINT1_RAT	Hint1	Adenosine 5'-monophosphoramidase HINT1	0	CAADLGLK	C(UniMod:4)AADLGLK	2	C(UniMod:4)AADLGLK2	2713.57	9153.41	4203.11
P16636	P16636	LYOX_RAT	Lox	Protein-lysine 6-oxidase	1	CAAEENCLASSAYR	C(UniMod:4)AAEENC(UniMod:4)LASSAYR	2	C(UniMod:4)AAEENC(UniMod:4)LASSAYR2	21333.1	9450.55	12570.4
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	CAAGEALGR	C(UniMod:4)AAGEALGR	2	C(UniMod:4)AAGEALGR2	19456.4	33799	33806
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	CAAGLAELAAR	C(UniMod:4)AAGLAELAAR	2	C(UniMod:4)AAGLAELAAR2	142460	151632	159285
D3ZN06	D3ZN06	D3ZN06_RAT	Cd248	CD248 molecule	1	CAALEASGEHR	C(UniMod:4)AALEASGEHR	3	C(UniMod:4)AALEASGEHR3	645311	788258	
O88902	O88902	PTN23_RAT	Ptpn23	Tyrosine-protein phosphatase non-receptor type 23 (Fragment)	1	CAALSVRPDTVK	C(UniMod:4)AALSVRPDTVK	3	C(UniMod:4)AALSVRPDTVK3	12703.6	9007.42	12553.1
Q6AYT7	Q6AYT7	ABD12_RAT	Abhd12	Lysophosphatidylserine lipase ABHD12	1	CAASGSSSSGSAAAALDADCSLK	C(UniMod:4)AASGSSSSGSAAAALDADC(UniMod:4)SLK	3	C(UniMod:4)AASGSSSSGSAAAALDADC(UniMod:4)SLK3	2962.34	2029.91	929.726
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	CACFPGFELQGDGR	C(UniMod:4)AC(UniMod:4)FPGFELQGDGR	2	C(UniMod:4)AC(UniMod:4)FPGFELQGDGR2	392196	380764	421662
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	CACFPGFELQGDGR	C(UniMod:4)AC(UniMod:4)FPGFELQGDGR	3	C(UniMod:4)AC(UniMod:4)FPGFELQGDGR3	8683.87	3534.69	8251.35
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	CACGALTSQHIR	C(UniMod:4)AC(UniMod:4)GALTSQHIR	2	C(UniMod:4)AC(UniMod:4)GALTSQHIR2	1.96429e+06	1.74367e+06	1.70118e+06
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	CACGALTSQHIR	C(UniMod:4)AC(UniMod:4)GALTSQHIR	3	C(UniMod:4)AC(UniMod:4)GALTSQHIR3	29089.5	28915.4	27850.2
Q6V0K7	Q6V0K7	OIT3_RAT	Oit3	Oncoprotein-induced transcript 3 protein	1	CACGVGR	C(UniMod:4)AC(UniMod:4)GVGR	2	C(UniMod:4)AC(UniMod:4)GVGR2			24479.8
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	CACIDVR	C(UniMod:4)AC(UniMod:4)IDVR	2	C(UniMod:4)AC(UniMod:4)IDVR2	6660.44	6775.03	9061.38
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	CACKYPYTGPDCSK	C(UniMod:4)AC(UniMod:4)KYPYTGPDC(UniMod:4)SK	3	C(UniMod:4)AC(UniMod:4)KYPYTGPDC(UniMod:4)SK3	7026.1	19002.7	13080.7
A0A0G2K0H3	A0A0G2K0H3	A0A0G2K0H3_RAT	Lrp6	Low-density lipoprotein receptor-related protein	1	CACPIGFELISDMK	C(UniMod:4)AC(UniMod:4)PIGFELISDMK	2	C(UniMod:4)AC(UniMod:4)PIGFELISDMK2	2047.07	4214.96	4383.67
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	CACPPGLSGPSCR	C(UniMod:4)AC(UniMod:4)PPGLSGPSC(UniMod:4)R	2	C(UniMod:4)AC(UniMod:4)PPGLSGPSC(UniMod:4)R2	83053.3	86784.5	89783.1
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CACPTNFYLGGDGR	C(UniMod:4)AC(UniMod:4)PTNFYLGGDGR	2	C(UniMod:4)AC(UniMod:4)PTNFYLGGDGR2	129726	155003	146945
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CACTYGFTGPQCER	C(UniMod:4)AC(UniMod:4)TYGFTGPQC(UniMod:4)ER	2	C(UniMod:4)AC(UniMod:4)TYGFTGPQC(UniMod:4)ER2	19094.9	23306.5	13441.2
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CACTYGFTGPQCER	C(UniMod:4)AC(UniMod:4)TYGFTGPQC(UniMod:4)ER	3	C(UniMod:4)AC(UniMod:4)TYGFTGPQC(UniMod:4)ER3	1613.37	3697.9	4947.94
D4A0J7	D4A0J7	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	1	CACVAPPSAVNPCEGDFR	C(UniMod:4)AC(UniMod:4)VAPPSAVNPC(UniMod:4)EGDFR	3	C(UniMod:4)AC(UniMod:4)VAPPSAVNPC(UniMod:4)EGDFR3	91580.2	94608.5	108317
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	CACVYGFTGPQCER	C(UniMod:4)AC(UniMod:4)VYGFTGPQC(UniMod:4)ER	2	C(UniMod:4)AC(UniMod:4)VYGFTGPQC(UniMod:4)ER2	3027.87	1667.81	986.778
D3ZQQ1	D3ZQQ1	D3ZQQ1_RAT	Aftph	Aftiphilin	1	CADLSMDSIK	C(UniMod:4)ADLSMDSIK	2	C(UniMod:4)ADLSMDSIK2	3759.51	5959.7	3596.06
A0A8I5YC01	A0A8I5YC01	A0A8I5YC01_RAT	Gimap1	GTPase, IMAP family member 1	1	CADPQDQLTK	C(UniMod:4)ADPQDQLTK	2	C(UniMod:4)ADPQDQLTK2	13464	9394.04	14218.8
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	CAEEAQLISSLK	C(UniMod:4)AEEAQLISSLK	2	C(UniMod:4)AEEAQLISSLK2	30840.4	27032.2	28478.2
P01026	P01026	CO3_RAT	C3	Complement C3	1	CAEENCFMHQSQDQVSLNER	C(UniMod:4)AEENC(UniMod:4)FMHQSQDQVSLNER	3	C(UniMod:4)AEENC(UniMod:4)FMHQSQDQVSLNER3	636362	643833	575173
P01026	P01026	CO3_RAT	C3	Complement C3	1	CAEENCFMHQSQDQVSLNER	C(UniMod:4)AEENC(UniMod:4)FMHQSQDQVSLNER	4	C(UniMod:4)AEENC(UniMod:4)FMHQSQDQVSLNER4	2631.85	9732.58	9855.47
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	CAEFELR	C(UniMod:4)AEFELR	2	C(UniMod:4)AEFELR2	68246.3	53168.6	69546.7
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	CAEGFEGTLCER	C(UniMod:4)AEGFEGTLC(UniMod:4)ER	2	C(UniMod:4)AEGFEGTLC(UniMod:4)ER2	34484.5	29923.5	27372.2
Q3B7U4	Q3B7U4	CTU2_RAT	Ctu2	Cytoplasmic tRNA 2-thiolation protein 2	1	CAEGLPVVVIR	C(UniMod:4)AEGLPVVVIR	2	C(UniMod:4)AEGLPVVVIR2	10986.4	12986.4	11066.9
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	CAEGLVDAVQATDQYCAR	C(UniMod:4)AEGLVDAVQATDQYC(UniMod:4)AR	3	C(UniMod:4)AEGLVDAVQATDQYC(UniMod:4)AR3	3525.72	982.844	
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	CAEGYALYAQALTDQQQFGK	C(UniMod:4)AEGYALYAQALTDQQQFGK	3	C(UniMod:4)AEGYALYAQALTDQQQFGK3	14775.1	21341.1	14774.2
Q68FT7	Q68FT7	Q68FT7_RAT	Farsb	Phenylalanine--tRNA ligase beta subunit	1	CAEIFVGGQSIGK	C(UniMod:4)AEIFVGGQSIGK	2	C(UniMod:4)AEIFVGGQSIGK2	9011.38	7038.25	17364.1
P04692	P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	1	CAELEEELK	C(UniMod:4)AELEEELK	2	C(UniMod:4)AELEEELK2	243437	176548	204529
P35000	P35000	VIPR2_RAT	Vipr2	Vasoactive intestinal polypeptide receptor 2	1	CAELLSSQMENHR	C(UniMod:4)AELLSSQMENHR	3	C(UniMod:4)AELLSSQMENHR3	7790.23	10179	5996.28
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	CAEPPLLENQLVLK	C(UniMod:4)AEPPLLENQLVLK	2	C(UniMod:4)AEPPLLENQLVLK2	69393.5	73587.3	75214.1
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	CAEPPLLENQLVLK	C(UniMod:4)AEPPLLENQLVLK	3	C(UniMod:4)AEPPLLENQLVLK3	3699.29	8528.5	5603.16
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	CAESLVPLLSNVNVSDR	C(UniMod:4)AESLVPLLSNVNVSDR	2	C(UniMod:4)AESLVPLLSNVNVSDR2	10295.6	6465.34	8456.69
Q5U2R7	Q5U2R7	MESD_RAT	Mesd	LRP chaperone MESD	1	CAEVTLEGQMYPGK	C(UniMod:4)AEVTLEGQMYPGK	2	C(UniMod:4)AEVTLEGQMYPGK2	9580.23	10887.1	11460.8
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	CAEYWPCMEEGTR	C(UniMod:4)AEYWPC(UniMod:4)MEEGTR	2	C(UniMod:4)AEYWPC(UniMod:4)MEEGTR2	76599.9	71812.2	75583.8
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	CAEYWPCMEEGTR	C(UniMod:4)AEYWPC(UniMod:4)MEEGTR	3	C(UniMod:4)AEYWPC(UniMod:4)MEEGTR3	5730.96	3271.44	215.851
P51607	P51607	RENBP_RAT	Renbp	N-acylglucosamine 2-epimerase	1	CAFVLTQDGRPVK	C(UniMod:4)AFVLTQDGRPVK	3	C(UniMod:4)AFVLTQDGRPVK3	5522.65	4333.02	
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	CAGCDELIFSNEYTQAENQNWHLK	C(UniMod:4)AGC(UniMod:4)DELIFSNEYTQAENQNWHLK	3	C(UniMod:4)AGC(UniMod:4)DELIFSNEYTQAENQNWHLK3	16775.7	5899.7	5975.37
A0A8J8Y9Q4	A0A8J8Y9Q4	A0A8J8Y9Q4_RAT	Zfyve19	Zinc finger FYVE-type containing 19	1	CAGCDGDLYCAR	C(UniMod:4)AGC(UniMod:4)DGDLYC(UniMod:4)AR	2	C(UniMod:4)AGC(UniMod:4)DGDLYC(UniMod:4)AR2		2840.11	765.815
O35115	O35115	FHL2_RAT	Fhl2	Four and a half LIM domains protein 2	1	CAGCTNPISGLGGTK	C(UniMod:4)AGC(UniMod:4)TNPISGLGGTK	2	C(UniMod:4)AGC(UniMod:4)TNPISGLGGTK2		3116.23	1257.41
P28840	P28840	NEC1_RAT	Pcsk1	Neuroendocrine convertase 1	1	CAGEIAMQANNHK	C(UniMod:4)AGEIAMQANNHK	3	C(UniMod:4)AGEIAMQANNHK3	1711.61	4947.04	4798.17
P38062	P38062	MAP2_RAT	Metap2	Methionine aminopeptidase 2	1	CAGIDVR	C(UniMod:4)AGIDVR	2	C(UniMod:4)AGIDVR2	18980.9	16458.5	19350.3
P20673	P20673	ARLY_RAT	Asl	Argininosuccinate lyase	1	CAGLLMTLK	C(UniMod:4)AGLLMTLK	2	C(UniMod:4)AGLLMTLK2	8131.96		3603.52
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	CAGPPEMEGK	C(UniMod:4)AGPPEMEGK	2	C(UniMod:4)AGPPEMEGK2	4863.3	9637.69	10289.8
D3ZYB4	D3ZYB4	D3ZYB4_RAT	Lpin2	phosphatidate phosphatase	1	CAGTIYLWNWNDK	C(UniMod:4)AGTIYLWNWNDK	2	C(UniMod:4)AGTIYLWNWNDK2	3876.84	1954.27	5325.21
A0A8I5ZUE7	A0A8I5ZUE7	A0A8I5ZUE7_RAT	Zc3h7b	Zinc finger CCCH-type containing 7B	1	CAHGQEELNEWLDRR	C(UniMod:4)AHGQEELNEWLDRR	4	C(UniMod:4)AHGQEELNEWLDRR4	1843.04	2364.91	
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	CAHGYFNFQEGGCTACDCSHLGNNCNPK	C(UniMod:4)AHGYFNFQEGGC(UniMod:4)TAC(UniMod:4)DC(UniMod:4)SHLGNNC(UniMod:4)NPK	4	C(UniMod:4)AHGYFNFQEGGC(UniMod:4)TAC(UniMod:4)DC(UniMod:4)SHLGNNC(UniMod:4)NPK4	8539.91	5789.28	6308.55
Q5U2Z3	Q5U2Z3	NP1L4_RAT	Nap1l4	Nucleosome assembly protein 1-like 4	1	CAHIEAK	C(UniMod:4)AHIEAK	2	C(UniMod:4)AHIEAK2			82635.4
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	CAHILTK	C(UniMod:4)AHILTK	2	C(UniMod:4)AHILTK2	8344.81	4783.29	8889.89
F1M8L9	F1M8L9	F1M8L9_RAT	Rapgef1	Rap guanine nucleotide exchange factor 1	1	CAHSDQPLAAR	C(UniMod:4)AHSDQPLAAR	3	C(UniMod:4)AHSDQPLAAR3	2355.38	3235.08	
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	CAIGVTHFQLVQMK	C(UniMod:4)AIGVTHFQLVQMK	3	C(UniMod:4)AIGVTHFQLVQMK3	33989.3	37097.1	41194.5
Q62751	Q62751	IREB2_RAT	Ireb2	Iron-responsive element-binding protein 2	1	CAIQNAPNPGGGDLQK	C(UniMod:4)AIQNAPNPGGGDLQK	2	C(UniMod:4)AIQNAPNPGGGDLQK2	2994.88		
Q62632	Q62632	FSTL1_RAT	Fstl1	Follistatin-related protein 1	1	CALEDETYADGAETEVDCNR	C(UniMod:4)ALEDETYADGAETEVDC(UniMod:4)NR	3	C(UniMod:4)ALEDETYADGAETEVDC(UniMod:4)NR3	10563.2	5273.91	4966.97
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	CALGVFR	C(UniMod:4)ALGVFR	2	C(UniMod:4)ALGVFR2	160501	168724	162013
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	CALGWDHQEK	C(UniMod:4)ALGWDHQEK	2	C(UniMod:4)ALGWDHQEK2	88475.1	64552.7	89757.8
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	CALGWDHQEK	C(UniMod:4)ALGWDHQEK	3	C(UniMod:4)ALGWDHQEK3	620960	646263	656525
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	CALGYYGIVR	C(UniMod:4)ALGYYGIVR	2	C(UniMod:4)ALGYYGIVR2	15667.3	26440.7	23834.7
A0A8I6AGL0	A0A8I6AGL0	A0A8I6AGL0_RAT	Ankrd44	Ankyrin repeat domain 44	1	CALLILDK	C(UniMod:4)ALLILDK	2	C(UniMod:4)ALLILDK2	9137.34	4394.99	8770.23
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	CALNEHSLER	C(UniMod:4)ALNEHSLER	3	C(UniMod:4)ALNEHSLER3	11215.7	15527.1	7063.64
Q8VIL3	Q8VIL3	ZWINT_RAT	Zwint	ZW10 interactor	1	CALSEALPQVK	C(UniMod:4)ALSEALPQVK	2	C(UniMod:4)ALSEALPQVK2	30488.9	21707.9	26607
Q9QWG5	Q9QWG5	INP4B_RAT	Inpp4b	Type II inositol 3,4-bisphosphate 4-phosphatase	1	CALVYDSTAPESLSGK	C(UniMod:4)ALVYDSTAPESLSGK	2	C(UniMod:4)ALVYDSTAPESLSGK2	4284.8	7671.53	4133.1
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	CAMENVFQHK	C(UniMod:4)AMENVFQHK	3	C(UniMod:4)AMENVFQHK3	11268	11853.1	6363.18
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	CAMLQFSEFHEK	C(UniMod:4)AMLQFSEFHEK	2	C(UniMod:4)AMLQFSEFHEK2	3971.24		
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	CAMLQFSEFHEK	C(UniMod:4)AMLQFSEFHEK	3	C(UniMod:4)AMLQFSEFHEK3	6083.36	13083.1	5348.88
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	CAMTALSSK	C(UniMod:4)AMTALSSK	1	C(UniMod:4)AMTALSSK1	1284.26		1408.5
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	CAMTALSSK	C(UniMod:4)AMTALSSK	2	C(UniMod:4)AMTALSSK2	288816	323263	294804
Q9QUR2	Q9QUR2	DCTN4_RAT	Dctn4	Dynactin subunit 4	1	CANCFDCPGCMHTLSTR	C(UniMod:4)ANC(UniMod:4)FDC(UniMod:4)PGC(UniMod:4)MHTLSTR	3	C(UniMod:4)ANC(UniMod:4)FDC(UniMod:4)PGC(UniMod:4)MHTLSTR3	24009.1	23420.5	37310.7
D3ZSL2	D3ZSL2	D3ZSL2_RAT	Abracl	Costars family protein ABRACL	1	CANLFEALVGTLK	C(UniMod:4)ANLFEALVGTLK	2	C(UniMod:4)ANLFEALVGTLK2	12321.8	7928.45	18349.8
D3ZSL2	D3ZSL2	D3ZSL2_RAT	Abracl	Costars family protein ABRACL	1	CANLFEALVGTLK	C(UniMod:4)ANLFEALVGTLK	3	C(UniMod:4)ANLFEALVGTLK3	1968.37	2013.66	3828.3
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	CANLGNAPVYSYPGK	C(UniMod:4)ANLGNAPVYSYPGK	2	C(UniMod:4)ANLGNAPVYSYPGK2	3.75707e+06	4.43332e+06	4.82911e+06
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	CANLGNAPVYSYPGK	C(UniMod:4)ANLGNAPVYSYPGK	3	C(UniMod:4)ANLGNAPVYSYPGK3	166681	196264	234602
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	CAPEEELLSCSSFSR	C(UniMod:4)APEEELLSC(UniMod:4)SSFSR	2	C(UniMod:4)APEEELLSC(UniMod:4)SSFSR2	164080	121672	104687
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	CAPEEELLSCSSFSR	C(UniMod:4)APEEELLSC(UniMod:4)SSFSR	3	C(UniMod:4)APEEELLSC(UniMod:4)SSFSR3	80774.8	89324.4	85480.3
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	CAPFFYGGCGGNR	C(UniMod:4)APFFYGGC(UniMod:4)GGNR	2	C(UniMod:4)APFFYGGC(UniMod:4)GGNR2	63458.8	108982	89990
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	CAPGFTGEDCQYSTSHPCFVSR	C(UniMod:4)APGFTGEDC(UniMod:4)QYSTSHPC(UniMod:4)FVSR	3	C(UniMod:4)APGFTGEDC(UniMod:4)QYSTSHPC(UniMod:4)FVSR3	12282.7	18224.6	24843.6
P35572	P35572	IBP6_RAT	Igfbp6	Insulin-like growth factor-binding protein 6	1	CAPGLQCQPR	C(UniMod:4)APGLQC(UniMod:4)QPR	2	C(UniMod:4)APGLQC(UniMod:4)QPR2			6181.68
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CAPGTCQNLDGSYR	C(UniMod:4)APGTC(UniMod:4)QNLDGSYR	2	C(UniMod:4)APGTC(UniMod:4)QNLDGSYR2	28588.7	23294.8	14961.4
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	CAPGVGLVR	C(UniMod:4)APGVGLVR	2	C(UniMod:4)APGVGLVR2	113345	106897	124364
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	CAPGVVGPTEADIDFDIIR	C(UniMod:4)APGVVGPTEADIDFDIIR	3	C(UniMod:4)APGVVGPTEADIDFDIIR3	139699	131513	150735
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	CAPGVVGPTEADIDFDIIRNDNDTFTVK	C(UniMod:4)APGVVGPTEADIDFDIIRNDNDTFTVK	4	C(UniMod:4)APGVVGPTEADIDFDIIRNDNDTFTVK4	39847.2	32365.2	33794
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	CAPGYELADDHMHCR	C(UniMod:4)APGYELADDHMHC(UniMod:4)R	3	C(UniMod:4)APGYELADDHMHC(UniMod:4)R3	13236.5		6433.15
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	CAPGYELADDHMHCR	C(UniMod:4)APGYELADDHMHC(UniMod:4)R	4	C(UniMod:4)APGYELADDHMHC(UniMod:4)R4	13176.5	8470.96	20954.5
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	CAPGYELADDHMHCRPTVNFPCGK	C(UniMod:4)APGYELADDHMHC(UniMod:4)RPTVNFPC(UniMod:4)GK	4	C(UniMod:4)APGYELADDHMHC(UniMod:4)RPTVNFPC(UniMod:4)GK4	16108.8	2970.11	3233.3
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	CAPGYHGNPSQGQPCHR	C(UniMod:4)APGYHGNPSQGQPC(UniMod:4)HR	2	C(UniMod:4)APGYHGNPSQGQPC(UniMod:4)HR2			1608.82
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	CAPGYHGNPSQGQPCHR	C(UniMod:4)APGYHGNPSQGQPC(UniMod:4)HR	3	C(UniMod:4)APGYHGNPSQGQPC(UniMod:4)HR3			11892.4
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	CAPGYHGNPSQGQPCHR	C(UniMod:4)APGYHGNPSQGQPC(UniMod:4)HR	4	C(UniMod:4)APGYHGNPSQGQPC(UniMod:4)HR4			18182.2
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	CAPGYYGDAR	C(UniMod:4)APGYYGDAR	2	C(UniMod:4)APGYYGDAR2	42767.4	42733.6	29881.5
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	CAPGYYGNPLLIGSTCK	C(UniMod:4)APGYYGNPLLIGSTC(UniMod:4)K	2	C(UniMod:4)APGYYGNPLLIGSTC(UniMod:4)K2	21810.6	27317.5	24541.1
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	CAPLATEVFDEK	C(UniMod:4)APLATEVFDEK	2	C(UniMod:4)APLATEVFDEK2	21227.7	17131.4	21339.7
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	CAPNCESCFGSHADQCLSCK	C(UniMod:4)APNC(UniMod:4)ESC(UniMod:4)FGSHADQC(UniMod:4)LSC(UniMod:4)K	3	C(UniMod:4)APNC(UniMod:4)ESC(UniMod:4)FGSHADQC(UniMod:4)LSC(UniMod:4)K3	72717.1	61815.9	84657.5
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	CAPVNISCYAK	C(UniMod:4)APVNISC(UniMod:4)YAK	2	C(UniMod:4)APVNISC(UniMod:4)YAK2	71133.7	77347.1	61876.7
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	CAQDYLAR	C(UniMod:4)AQDYLAR	2	C(UniMod:4)AQDYLAR2	106352	78193.1	80529.3
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	CAQELPGR	C(UniMod:4)AQELPGR	2	C(UniMod:4)AQELPGR2	5588.38	6106.86	8651.3
Q9Z2G8	D4AEJ0;Q9Z2G8	NP1L1_RAT	Nap1l1	Nucleosome assembly protein 1-like 1	0	CAQIEAK	C(UniMod:4)AQIEAK	1	C(UniMod:4)AQIEAK1	25045.1	13074.1	12885.4
Q9Z2G8	D4AEJ0;Q9Z2G8	NP1L1_RAT	Nap1l1	Nucleosome assembly protein 1-like 1	0	CAQIEAK	C(UniMod:4)AQIEAK	2	C(UniMod:4)AQIEAK2	338762	242501	223615
D3ZSC2	D3ZSC2	D3ZSC2_RAT	Pdcd2l	Programmed cell death 2-like	1	CAQPLALVVQVYCPLEGSPFHR	C(UniMod:4)AQPLALVVQVYC(UniMod:4)PLEGSPFHR	3	C(UniMod:4)AQPLALVVQVYC(UniMod:4)PLEGSPFHR3	9539	8623.81	8991.68
Q5XIN4	Q5XIN4	Q5XIN4_RAT	Mtmr9	Myotubularin related protein 9	1	CAQSAYCSSK	C(UniMod:4)AQSAYC(UniMod:4)SSK	2	C(UniMod:4)AQSAYC(UniMod:4)SSK2			2512.46
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	CAQYWPQK	C(UniMod:4)AQYWPQK	2	C(UniMod:4)AQYWPQK2	31981.8	33937.1	21487.7
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	CAQYWPQKEEK	C(UniMod:4)AQYWPQKEEK	2	C(UniMod:4)AQYWPQKEEK2	5998.55	2382.29	5792.71
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	CAQYWPQKEEK	C(UniMod:4)AQYWPQKEEK	3	C(UniMod:4)AQYWPQKEEK3	23894.7	20160.7	19877.9
F1M6V8	F1M6V8	F1M6V8_RAT	Strn4	Striatin 4	1	CASEGNPHELESR	C(UniMod:4)ASEGNPHELESR	3	C(UniMod:4)ASEGNPHELESR3	12911.9	14724.5	8852.65
Q5BJM5	Q5BJM5	PKHO1_RAT	Plekho1	Pleckstrin homology domain-containing family O member 1	1	CASLEEILSQR	C(UniMod:4)ASLEEILSQR	2	C(UniMod:4)ASLEEILSQR2	2666.77		6886.5
B4F795	B4F795	CTL2_RAT	Slc44a2	Choline transporter-like protein 2	1	CASPLVLLEFHCPTPQICVK	C(UniMod:4)ASPLVLLEFHC(UniMod:4)PTPQIC(UniMod:4)VK	3	C(UniMod:4)ASPLVLLEFHC(UniMod:4)PTPQIC(UniMod:4)VK3	64465.8	69290.5	78305.8
D3ZRX9	D3ZRX9	D3ZRX9_RAT	Cnn2	Calponin	1	CASQSGMTAYGTR	C(UniMod:4)ASQSGMTAYGTR	2	C(UniMod:4)ASQSGMTAYGTR2	433303	441376	409978
D3ZRX9	D3ZRX9	D3ZRX9_RAT	Cnn2	Calponin	1	CASQSGMTAYGTR	C(UniMod:4)ASQSGMTAYGTR	3	C(UniMod:4)ASQSGMTAYGTR3	9797.83	11329	7595.07
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	CASSNWSER	C(UniMod:4)ASSNWSER	2	C(UniMod:4)ASSNWSER2	21246.1	26322.3	12614.8
Q66HC1	Q66HC1	TDRD3_RAT	Tdrd3	Tudor domain-containing protein 3	1	CASTVQVDSR	C(UniMod:4)ASTVQVDSR	2	C(UniMod:4)ASTVQVDSR2	4814.7	1916.71	
D3ZK09	D3ZK09	D3ZK09_RAT	Scyl3	SCY1 like pseudokinase 3	1	CASVFVYK	C(UniMod:4)ASVFVYK	2	C(UniMod:4)ASVFVYK2	5756.33	5957.99	5841.62
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	CATAYTK	C(UniMod:4)ATAYTK	2	C(UniMod:4)ATAYTK2	129731		695834
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	CATITPDEAR	C(UniMod:4)ATITPDEAR	2	C(UniMod:4)ATITPDEAR2	197068	180547	181201
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	CATITPDEARVEEFK	C(UniMod:4)ATITPDEARVEEFK	3	C(UniMod:4)ATITPDEARVEEFK3	5766.11	9430.02	10538.6
P41562	P41562	IDHC_RAT	Idh1	Isocitrate dehydrogenase [NADP] cytoplasmic	1	CATITPDEK	C(UniMod:4)ATITPDEK	2	C(UniMod:4)ATITPDEK2	5227.28	6558.23	5663.48
A0A8I5Y9A0	A0A8I5Y9A0	A0A8I5Y9A0_RAT	Tex264	Testis expressed 264	1	CAVGSILSEGEESPSPELIHLYQK	C(UniMod:4)AVGSILSEGEESPSPELIHLYQK	3	C(UniMod:4)AVGSILSEGEESPSPELIHLYQK3	6622.94	9580.1	10133.7
Q642B4	Q642B4	Q642B4_RAT	Clec14a	C-type lectin domain containing 14A	1	CAVLQATGGVEPAGWK	C(UniMod:4)AVLQATGGVEPAGWK	2	C(UniMod:4)AVLQATGGVEPAGWK2	12490.9	11389.3	10436.4
Q5FVQ9	Q5FVQ9	TBCE_RAT	Tbce	Tubulin-specific chaperone E	1	CAVSCAGER	C(UniMod:4)AVSC(UniMod:4)AGER	2	C(UniMod:4)AVSC(UniMod:4)AGER2	7656.89		2582.7
D3Z9Y3	D3Z9Y3	D3Z9Y3_RAT	Cerk	Ceramide kinase	1	CAVSLEPAR	C(UniMod:4)AVSLEPAR	2	C(UniMod:4)AVSLEPAR2	18913.6	15428.3	17915
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	CAVVDVPFGGAK	C(UniMod:4)AVVDVPFGGAK	2	C(UniMod:4)AVVDVPFGGAK2	94136.2	81413.1	116944
Q6ZXC8	Q6ZXC8;G3V7T2	SIA8E_RAT	St8sia5	Alpha-2,8-sialyltransferase 8E	0	CAVVGNGGILK	C(UniMod:4)AVVGNGGILK	2	C(UniMod:4)AVVGNGGILK2	1718.64	2402.62	3514.27
A0A1W2Q5Z7	A0A1W2Q5Z7	A0A1W2Q5Z7_RAT	St3gal1	ST3 beta-galactoside alpha-2,3-sialyltransferase 1	1	CAVVGNSGNLK	C(UniMod:4)AVVGNSGNLK	2	C(UniMod:4)AVVGNSGNLK2	36155.8	35828.7	32578.8
Q11205	Q11205	SIA4B_RAT	St3gal2	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2	1	CAVVGNSGNLR	C(UniMod:4)AVVGNSGNLR	2	C(UniMod:4)AVVGNSGNLR2	12896.5	12394.5	10673.5
P13721	P13721	SIAT1_RAT	St6gal1	Beta-galactoside alpha-2,6-sialyltransferase 1	1	CAVVSSAGSLK	C(UniMod:4)AVVSSAGSLK	2	C(UniMod:4)AVVSSAGSLK2	11137.1	12238.9	6265.46
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	CAYCFFLNPAR	C(UniMod:4)AYC(UniMod:4)FFLNPAR	2	C(UniMod:4)AYC(UniMod:4)FFLNPAR2	163682	154499	137675
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	CAYEVSQAHK	C(UniMod:4)AYEVSQAHK	3	C(UniMod:4)AYEVSQAHK3		13010.7	11361.7
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	CAYEVTQANGK	C(UniMod:4)AYEVTQANGK	2	C(UniMod:4)AYEVTQANGK2	5845.41	8266.74	8391.09
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	CAYLQAR	C(UniMod:4)AYLQAR	2	C(UniMod:4)AYLQAR2	14755.1	19988.2	19061
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	CCADYNSFCEEVK	C(UniMod:4)C(UniMod:4)ADYNSFC(UniMod:4)EEVK	2	C(UniMod:4)C(UniMod:4)ADYNSFC(UniMod:4)EEVK2	65593	63390.7	75301.4
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	CCADYNSFCEEVK	C(UniMod:4)C(UniMod:4)ADYNSFC(UniMod:4)EEVK	3	C(UniMod:4)C(UniMod:4)ADYNSFC(UniMod:4)EEVK3	16708.4	9063.62	12566.7
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	CCADYNSFCEEVKDNK	C(UniMod:4)C(UniMod:4)ADYNSFC(UniMod:4)EEVKDNK	3	C(UniMod:4)C(UniMod:4)ADYNSFC(UniMod:4)EEVKDNK3	24733.4	20743.4	36354.7
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	CCADYNSFCEEVKDNKK	C(UniMod:4)C(UniMod:4)ADYNSFC(UniMod:4)EEVKDNKK	3	C(UniMod:4)C(UniMod:4)ADYNSFC(UniMod:4)EEVKDNKK3	34165.4	32225.1	17078.1
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	CCADYNSFCEEVKDNKK	C(UniMod:4)C(UniMod:4)ADYNSFC(UniMod:4)EEVKDNKK	4	C(UniMod:4)C(UniMod:4)ADYNSFC(UniMod:4)EEVKDNKK4	113889	163815	143879
P02770	P02770	ALBU_RAT	Alb	Albumin	1	CCAEGDPPACYGTVLAEFQPLVEEPK	C(UniMod:4)C(UniMod:4)AEGDPPAC(UniMod:4)YGTVLAEFQPLVEEPK	3	C(UniMod:4)C(UniMod:4)AEGDPPAC(UniMod:4)YGTVLAEFQPLVEEPK3	2.10042e+06	2.26889e+06	1.90425e+06
P02770	P02770	ALBU_RAT	Alb	Albumin	1	CCAEGDPPACYGTVLAEFQPLVEEPK	C(UniMod:4)C(UniMod:4)AEGDPPAC(UniMod:4)YGTVLAEFQPLVEEPK	4	C(UniMod:4)C(UniMod:4)AEGDPPAC(UniMod:4)YGTVLAEFQPLVEEPK4	17399	13949.1	4747.51
A0A8I6ANL9	A0A8I6ANL9	A0A8I6ANL9_RAT	Cdc23	Cell division cycle 23	1	CCAFNDTREEGK	C(UniMod:4)C(UniMod:4)AFNDTREEGK	3	C(UniMod:4)C(UniMod:4)AFNDTREEGK3	14811.5	4944.15	8712.69
O08874	O08874	PKN2_RAT	Pkn2	Serine/threonine-protein kinase N2	1	CCAVLGR	C(UniMod:4)C(UniMod:4)AVLGR	2	C(UniMod:4)C(UniMod:4)AVLGR2	3130.56	4534.93	3989.33
Q6MFY6	Q6MFY6	PP1RB_RAT	Ppp1r11	E3 ubiquitin-protein ligase PPP1R11	1	CCCIYEKPR	C(UniMod:4)C(UniMod:4)C(UniMod:4)IYEKPR	2	C(UniMod:4)C(UniMod:4)C(UniMod:4)IYEKPR2	3128.48	3796.75	2161.33
Q6MFY6	Q6MFY6	PP1RB_RAT	Ppp1r11	E3 ubiquitin-protein ligase PPP1R11	1	CCCIYEKPR	C(UniMod:4)C(UniMod:4)C(UniMod:4)IYEKPR	3	C(UniMod:4)C(UniMod:4)C(UniMod:4)IYEKPR3	33992.2	34610.8	38481
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	CCCVADR	C(UniMod:4)C(UniMod:4)C(UniMod:4)VADR	2	C(UniMod:4)C(UniMod:4)C(UniMod:4)VADR2			6301.95
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	CCDDSYAFR	C(UniMod:4)C(UniMod:4)DDSYAFR	2	C(UniMod:4)C(UniMod:4)DDSYAFR2	191728	220294	221689
P01026	P01026	CO3_RAT	C3	Complement C3	1	CCEDGMR	C(UniMod:4)C(UniMod:4)EDGMR	1	C(UniMod:4)C(UniMod:4)EDGMR1			14499.5
P01026	P01026	CO3_RAT	C3	Complement C3	1	CCEDGMR	C(UniMod:4)C(UniMod:4)EDGMR	2	C(UniMod:4)C(UniMod:4)EDGMR2	29746		4727.1
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	CCELPGLRDEESCPDLPR	C(UniMod:4)C(UniMod:4)ELPGLRDEESC(UniMod:4)PDLPR	3	C(UniMod:4)C(UniMod:4)ELPGLRDEESC(UniMod:4)PDLPR3	35923.8	53278.1	38970.8
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	CCELPYPEQACCGEEEK	C(UniMod:4)C(UniMod:4)ELPYPEQAC(UniMod:4)C(UniMod:4)GEEEK	3	C(UniMod:4)C(UniMod:4)ELPYPEQAC(UniMod:4)C(UniMod:4)GEEEK3	137050	112985	114728
O70377	O70377	SNP23_RAT	Snap23	Synaptosomal-associated protein 23	1	CCGLCVCPCNR	C(UniMod:4)C(UniMod:4)GLC(UniMod:4)VC(UniMod:4)PC(UniMod:4)NR	2	C(UniMod:4)C(UniMod:4)GLC(UniMod:4)VC(UniMod:4)PC(UniMod:4)NR2	8359.72	4056.14	
A0A0G2JY11	A0A0G2JY11	A0A0G2JY11_RAT	Tspan9	Tetraspanin	1	CCGVTDYTDWYPVLGENTVPDR	C(UniMod:4)C(UniMod:4)GVTDYTDWYPVLGENTVPDR	3	C(UniMod:4)C(UniMod:4)GVTDYTDWYPVLGENTVPDR3	151038	162026	153843
P31053	P31053	CD37_RAT	Cd37	Leukocyte antigen CD37	1	CCGWQSPR	C(UniMod:4)C(UniMod:4)GWQSPR	2	C(UniMod:4)C(UniMod:4)GWQSPR2	9057.38	7022.77	8083.51
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	CCHCCMLGR	C(UniMod:4)C(UniMod:4)HC(UniMod:4)C(UniMod:4)MLGR	2	C(UniMod:4)C(UniMod:4)HC(UniMod:4)C(UniMod:4)MLGR2	20587.6	18746.4	
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	CCHCCMLGR	C(UniMod:4)C(UniMod:4)HC(UniMod:4)C(UniMod:4)MLGR	3	C(UniMod:4)C(UniMod:4)HC(UniMod:4)C(UniMod:4)MLGR3	54874.8	20613.1	37125.8
B1WC91	B1WC91	B1WC91_RAT	C1qtnf3	C1q and TNF related 3	1	CCHGDYGFR	C(UniMod:4)C(UniMod:4)HGDYGFR	2	C(UniMod:4)C(UniMod:4)HGDYGFR2	187966	181384	177106
B1WC91	B1WC91	B1WC91_RAT	C1qtnf3	C1q and TNF related 3	1	CCHGDYGFR	C(UniMod:4)C(UniMod:4)HGDYGFR	3	C(UniMod:4)C(UniMod:4)HGDYGFR3	1.97837e+06	2.24086e+06	2.70597e+06
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	CCLAQTPR	C(UniMod:4)C(UniMod:4)LAQTPR	2	C(UniMod:4)C(UniMod:4)LAQTPR2	3878.84	4610.99	
Q8K4C0	Q8K4C0	FMO5_RAT	Fmo5	Flavin-containing monooxygenase 5	1	CCLEEGLEPVCFER	C(UniMod:4)C(UniMod:4)LEEGLEPVC(UniMod:4)FER	2	C(UniMod:4)C(UniMod:4)LEEGLEPVC(UniMod:4)FER2	6704.36	6607.8	3775.48
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	CCLEFSLAWDMPR	C(UniMod:4)C(UniMod:4)LEFSLAWDMPR	2	C(UniMod:4)C(UniMod:4)LEFSLAWDMPR2	2972.83	4079.1	2382.01
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	CCLLHQK	C(UniMod:4)C(UniMod:4)LLHQK	2	C(UniMod:4)C(UniMod:4)LLHQK2	6547.71	2435.66	4546.81
F1LNS2	F1LNS2	F1LNS2_RAT	Dennd10	DENN domain containing 10	1	CCLTDENK	C(UniMod:4)C(UniMod:4)LTDENK	2	C(UniMod:4)C(UniMod:4)LTDENK2	3188.23		3050.25
A0A0G2JY11	A0A0G2JY11	A0A0G2JY11_RAT	Tspan9	Tetraspanin	1	CCMENSQGCGR	C(UniMod:4)C(UniMod:4)MENSQGC(UniMod:4)GR	2	C(UniMod:4)C(UniMod:4)MENSQGC(UniMod:4)GR2			13981.8
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	CCMPYTPICIAK	C(UniMod:4)C(UniMod:4)MPYTPIC(UniMod:4)IAK	2	C(UniMod:4)C(UniMod:4)MPYTPIC(UniMod:4)IAK2	75682.6	77504.6	62136.2
Q6ZXC8	Q6ZXC8	SIA8E_RAT	St8sia5	Alpha-2,8-sialyltransferase 8E	1	CCNAPNFLFTTQK	C(UniMod:4)C(UniMod:4)NAPNFLFTTQK	2	C(UniMod:4)C(UniMod:4)NAPNFLFTTQK2	5097.93	4398.22	6452.27
D3ZYT8	D3ZYT8	D3ZYT8_RAT	Pikfyve	1-phosphatidylinositol-3-phosphate 5-kinase	1	CCNQEIPGK	C(UniMod:4)C(UniMod:4)NQEIPGK	2	C(UniMod:4)C(UniMod:4)NQEIPGK2	6103.8	6487.65	7243.24
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	CCPAMGTLHNTNTLEAFK	C(UniMod:4)C(UniMod:4)PAMGTLHNTNTLEAFK	3	C(UniMod:4)C(UniMod:4)PAMGTLHNTNTLEAFK3	45759.2	42281.4	47979.5
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	CCPEESLK	C(UniMod:4)C(UniMod:4)PEESLK	2	C(UniMod:4)C(UniMod:4)PEESLK2	19750.8	18977.4	18818.3
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	CCPGYIGPNCQLK	C(UniMod:4)C(UniMod:4)PGYIGPNC(UniMod:4)QLK	2	C(UniMod:4)C(UniMod:4)PGYIGPNC(UniMod:4)QLK2	662034	573440	603407
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	CCPGYIGPNCQLK	C(UniMod:4)C(UniMod:4)PGYIGPNC(UniMod:4)QLK	3	C(UniMod:4)C(UniMod:4)PGYIGPNC(UniMod:4)QLK3	39175.2	39390.4	46383.4
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	CCPLLSAYVASHR	C(UniMod:4)C(UniMod:4)PLLSAYVASHR	3	C(UniMod:4)C(UniMod:4)PLLSAYVASHR3	18435.7	8843.98	18738
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	CCPLRDELQSACLEDQAK	C(UniMod:4)C(UniMod:4)PLRDELQSAC(UniMod:4)LEDQAK	3	C(UniMod:4)C(UniMod:4)PLRDELQSAC(UniMod:4)LEDQAK3	245943	238036	227295
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	CCPTDRDPTWEK	C(UniMod:4)C(UniMod:4)PTDRDPTWEK	2	C(UniMod:4)C(UniMod:4)PTDRDPTWEK2	6219.59	3757.57	2813.44
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	CCPTDRDPTWEK	C(UniMod:4)C(UniMod:4)PTDRDPTWEK	3	C(UniMod:4)C(UniMod:4)PTDRDPTWEK3	68627.3	78920.4	75116.5
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	CCPVTGSMPK	C(UniMod:4)C(UniMod:4)PVTGSMPK	2	C(UniMod:4)C(UniMod:4)PVTGSMPK2	10264	9391.93	7966.13
P27274	P27274	CD59_RAT	Cd59	CD59 glycoprotein	1	CCQADLCNK	C(UniMod:4)C(UniMod:4)QADLC(UniMod:4)NK	2	C(UniMod:4)C(UniMod:4)QADLC(UniMod:4)NK2		36160.6	
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	CCQANAQFAEISENLR	C(UniMod:4)C(UniMod:4)QANAQFAEISENLR	2	C(UniMod:4)C(UniMod:4)QANAQFAEISENLR2	4139.77	4262.63	3079.65
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	CCQANAQFAEISENLR	C(UniMod:4)C(UniMod:4)QANAQFAEISENLR	3	C(UniMod:4)C(UniMod:4)QANAQFAEISENLR3	11630.3	5559.88	7476.07
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	CCQDGMTK	C(UniMod:4)C(UniMod:4)QDGMTK	2	C(UniMod:4)C(UniMod:4)QDGMTK2			1.97415e+06
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	CCQDGMTKLPMAR	C(UniMod:4)C(UniMod:4)QDGMTKLPMAR	2	C(UniMod:4)C(UniMod:4)QDGMTKLPMAR2	2547.63	1284.34	2824.31
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	CCQDGMTKLPMAR	C(UniMod:4)C(UniMod:4)QDGMTKLPMAR	3	C(UniMod:4)C(UniMod:4)QDGMTKLPMAR3	142916	260744	266367
A0A8I5XVA3	A0A8I5XVA3	A0A8I5XVA3_RAT	Tnn	Tenascin N	1	CCQGAADLSR	C(UniMod:4)C(UniMod:4)QGAADLSR	2	C(UniMod:4)C(UniMod:4)QGAADLSR2	4555.87		
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	CCQQEGQELLR	C(UniMod:4)C(UniMod:4)QQEGQELLR	2	C(UniMod:4)C(UniMod:4)QQEGQELLR2	19470	22908	17813.1
M0RD14	M0RD14	M0RD14_RAT	LOC100362738	Pyruvate kinase	1	CCSGAIIVLTK	C(UniMod:4)C(UniMod:4)SGAIIVLTK	2	C(UniMod:4)C(UniMod:4)SGAIIVLTK2	138384	130278	122531
P02770	P02770	ALBU_RAT	Alb	Albumin	1	CCSGSLVER	C(UniMod:4)C(UniMod:4)SGSLVER	2	C(UniMod:4)C(UniMod:4)SGSLVER2	3.7632e+06	3.77002e+06	3.20007e+06
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	CCSINSPPR	C(UniMod:4)C(UniMod:4)SINSPPR	2	C(UniMod:4)C(UniMod:4)SINSPPR2	1.10737e+06	604230	532392
P02770	P02770	ALBU_RAT	Alb	Albumin	1	CCTLPEAQR	C(UniMod:4)C(UniMod:4)TLPEAQR	2	C(UniMod:4)C(UniMod:4)TLPEAQR2	81332.4	65449.8	59866
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	CCTPLQTR	C(UniMod:4)C(UniMod:4)TPLQTR	2	C(UniMod:4)C(UniMod:4)TPLQTR2	89020	87952.6	89537.9
Q561Q9	Q561Q9	Q561Q9_RAT	Ctsw	Cathepsin W	1	CCWAIAAADNIQTLWR	C(UniMod:4)C(UniMod:4)WAIAAADNIQTLWR	2	C(UniMod:4)C(UniMod:4)WAIAAADNIQTLWR2	9738.89	6529.19	5571.98
P08650	A0A8I6GA02;P08650	CO5_RAT	C5	Complement C5	0	CCYDGAR	C(UniMod:4)C(UniMod:4)YDGAR	2	C(UniMod:4)C(UniMod:4)YDGAR2	64789.5		48712.7
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	CDACGMNVHHR	C(UniMod:4)DAC(UniMod:4)GMNVHHR	2	C(UniMod:4)DAC(UniMod:4)GMNVHHR2			5458.07
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	CDACGMNVHHR	C(UniMod:4)DAC(UniMod:4)GMNVHHR	3	C(UniMod:4)DAC(UniMod:4)GMNVHHR3			7383.71
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	CDACPVGFTGPMVQGVGINFAK	C(UniMod:4)DAC(UniMod:4)PVGFTGPMVQGVGINFAK	3	C(UniMod:4)DAC(UniMod:4)PVGFTGPMVQGVGINFAK3	1.17611e+06	1.31633e+06	1.31245e+06
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CDADADCMDGSDEEACGTGVR	C(UniMod:4)DADADC(UniMod:4)MDGSDEEAC(UniMod:4)GTGVR	3	C(UniMod:4)DADADC(UniMod:4)MDGSDEEAC(UniMod:4)GTGVR3	10877.4	6098.42	7832.34
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	CDADGLHSLSYHPALNAILAVTSR	C(UniMod:4)DADGLHSLSYHPALNAILAVTSR	4	C(UniMod:4)DADGLHSLSYHPALNAILAVTSR4	4752.04	7457.84	18587.7
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	CDADINECDIPGR	C(UniMod:4)DADINEC(UniMod:4)DIPGR	2	C(UniMod:4)DADINEC(UniMod:4)DIPGR2	63582.9	69821.2	59311.8
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	CDAEAGQGDDYDPR	C(UniMod:4)DAEAGQGDDYDPR	2	C(UniMod:4)DAEAGQGDDYDPR2	3415.52	4352.41	6113.75
P03994	P03994	HPLN1_RAT	Hapln1	Hyaluronan and proteoglycan link protein 1	1	CDAGWLADGSVR	C(UniMod:4)DAGWLADGSVR	2	C(UniMod:4)DAGWLADGSVR2	15660.2	9564.66	12640.6
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	CDAISVLEK	C(UniMod:4)DAISVLEK	2	C(UniMod:4)DAISVLEK2	16010.6	19295.6	19111.6
A0A8I5ZVX1	A0A8I5ZVX1	A0A8I5ZVX1_RAT	Ppfibp2	PPFIA binding protein 2	1	CDANAPFAQWSTER	C(UniMod:4)DANAPFAQWSTER	2	C(UniMod:4)DANAPFAQWSTER2	5670.24		4599.16
A0A0G2K1G4	A0A0G2K1G4	A0A0G2K1G4_RAT	Rspry1	Ring finger and SPRY domain containing 1	1	CDASSFESVR	C(UniMod:4)DASSFESVR	2	C(UniMod:4)DASSFESVR2	7056.35	4797.8	8829.91
A0A0G2K736	A0A0G2K736	A0A0G2K736_RAT	Kdm1a	Lysine-specific histone demethylase	1	CDAVLCTLPLGVLK	C(UniMod:4)DAVLC(UniMod:4)TLPLGVLK	2	C(UniMod:4)DAVLC(UniMod:4)TLPLGVLK2	2427.51		2256.6
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	CDAVSILEK	C(UniMod:4)DAVSILEK	2	C(UniMod:4)DAVSILEK2	7812.37	4979.94	9090.87
D4A3W2	D4A3W2	D4A3W2_RAT	Crb2	Crumbs cell polarity complex component 2	1	CDCADTGYEGAR	C(UniMod:4)DC(UniMod:4)ADTGYEGAR	2	C(UniMod:4)DC(UniMod:4)ADTGYEGAR2	509.752		1870.97
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	CDCKPGFQR	C(UniMod:4)DC(UniMod:4)KPGFQR	2	C(UniMod:4)DC(UniMod:4)KPGFQR2	37768	54781.3	41713.8
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	CDCKPGFQR	C(UniMod:4)DC(UniMod:4)KPGFQR	3	C(UniMod:4)DC(UniMod:4)KPGFQR3	441995	534006	523085
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	CDCPAGWTGSR	C(UniMod:4)DC(UniMod:4)PAGWTGSR	2	C(UniMod:4)DC(UniMod:4)PAGWTGSR2	86321.7	87314.4	91359.8
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	CDCPPGLAVGVDGR	C(UniMod:4)DC(UniMod:4)PPGLAVGVDGR	2	C(UniMod:4)DC(UniMod:4)PPGLAVGVDGR2	4362.65	7834.93	7132.61
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	CDCPPGYSGLSCETCAPGFYR	C(UniMod:4)DC(UniMod:4)PPGYSGLSC(UniMod:4)ETC(UniMod:4)APGFYR	3	C(UniMod:4)DC(UniMod:4)PPGYSGLSC(UniMod:4)ETC(UniMod:4)APGFYR3	8675.82	6547.54	
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	CDDKPDMDSTVK	C(UniMod:4)DDKPDMDSTVK	3	C(UniMod:4)DDKPDMDSTVK3	8073.51	7994.62	8926.7
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	CDDLEALK	C(UniMod:4)DDLEALK	1	C(UniMod:4)DDLEALK1			2512.7
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	CDDLEALK	C(UniMod:4)DDLEALK	2	C(UniMod:4)DDLEALK2	35306.1	34372.5	37901.6
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	CDDLEALKK	C(UniMod:4)DDLEALKK	2	C(UniMod:4)DDLEALKK2	36293	35865.5	37982.4
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	CDDMDLFK	C(UniMod:4)DDMDLFK	2	C(UniMod:4)DDMDLFK2	9770.01	6095.62	15412.7
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	CDDMDLFKK	C(UniMod:4)DDMDLFKK	2	C(UniMod:4)DDMDLFKK2	2459.23	2525.72	4670.72
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	CDDMDLFKK	C(UniMod:4)DDMDLFKK	3	C(UniMod:4)DDMDLFKK3	17128.3	18769.4	20006.4
Q63621	Q63621	IL1AP_RAT	Il1rap	Interleukin-1 receptor accessory protein	1	CDDWGLDTMR	C(UniMod:4)DDWGLDTMR	2	C(UniMod:4)DDWGLDTMR2	50007.5	41118	46695
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	CDECKPETFGLQLGR	C(UniMod:4)DEC(UniMod:4)KPETFGLQLGR	3	C(UniMod:4)DEC(UniMod:4)KPETFGLQLGR3	18979.3	16301.1	15828.4
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	CDEERLDIMK	C(UniMod:4)DEERLDIMK	3	C(UniMod:4)DEERLDIMK3	10817.9	3851.74	3781.29
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CDEGYESGFMMMK	C(UniMod:4)DEGYESGFMMMK	2	C(UniMod:4)DEGYESGFMMMK2	12928.8	7156.79	16527.6
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	CDENILWLDYK	C(UniMod:4)DENILWLDYK	2	C(UniMod:4)DENILWLDYK2	87726.5	67675.6	78740.2
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	CDEYITQLDEMQR	C(UniMod:4)DEYITQLDEMQR	2	C(UniMod:4)DEYITQLDEMQR2	6089.16	3221.41	4749.58
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	CDFLSNCESLMAALASCK	C(UniMod:4)DFLSNC(UniMod:4)ESLMAALASC(UniMod:4)K	3	C(UniMod:4)DFLSNC(UniMod:4)ESLMAALASC(UniMod:4)K3	5687.38	2938.93	
P98166	P98166	VLDLR_RAT	Vldlr	Very low-density lipoprotein receptor	1	CDGDEDCTDGSDEK	C(UniMod:4)DGDEDC(UniMod:4)TDGSDEK	2	C(UniMod:4)DGDEDC(UniMod:4)TDGSDEK2			5063.82
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CDGDHDCADGSDEKDCTPR	C(UniMod:4)DGDHDC(UniMod:4)ADGSDEKDC(UniMod:4)TPR	3	C(UniMod:4)DGDHDC(UniMod:4)ADGSDEKDC(UniMod:4)TPR3			3664.77
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CDGDHDCADGSDEKDCTPR	C(UniMod:4)DGDHDC(UniMod:4)ADGSDEKDC(UniMod:4)TPR	4	C(UniMod:4)DGDHDC(UniMod:4)ADGSDEKDC(UniMod:4)TPR4			5853.03
Q5HZW5	Q5HZW5	CD320_RAT	Cd320	CD320 antigen	1	CDGDRDCSDGSDEEECRIEPCAQNR	C(UniMod:4)DGDRDC(UniMod:4)SDGSDEEEC(UniMod:4)RIEPC(UniMod:4)AQNR	4	C(UniMod:4)DGDRDC(UniMod:4)SDGSDEEEC(UniMod:4)RIEPC(UniMod:4)AQNR4	1027.71	1892.06	
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CDGEDDCGDGSDEPK	C(UniMod:4)DGEDDC(UniMod:4)GDGSDEPK	2	C(UniMod:4)DGEDDC(UniMod:4)GDGSDEPK2			10559.3
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CDGEDDCGDNSDENPEECTR	C(UniMod:4)DGEDDC(UniMod:4)GDNSDENPEEC(UniMod:4)TR	3	C(UniMod:4)DGEDDC(UniMod:4)GDNSDENPEEC(UniMod:4)TR3	3207.02	13635	5959.49
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CDGERDCPDGSDEAPEICPQSK	C(UniMod:4)DGERDC(UniMod:4)PDGSDEAPEIC(UniMod:4)PQSK	3	C(UniMod:4)DGERDC(UniMod:4)PDGSDEAPEIC(UniMod:4)PQSK3	152729	188267	163069
Q5HZW5	Q5HZW5	CD320_RAT	Cd320	CD320 antigen	1	CDGHPDCPDSSDELSCDTDTETDK	C(UniMod:4)DGHPDC(UniMod:4)PDSSDELSC(UniMod:4)DTDTETDK	3	C(UniMod:4)DGHPDC(UniMod:4)PDSSDELSC(UniMod:4)DTDTETDK3	3364.99	6466.86	4659.16
D3ZFK8	D3ZFK8	D3ZFK8_RAT	Farp2	FERM, ARH/RhoGEF and pleckstrin domain protein 2	1	CDGQVLLTQVWK	C(UniMod:4)DGQVLLTQVWK	2	C(UniMod:4)DGQVLLTQVWK2	2221.5		1469.07
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	CDGRTDCENGSDELDCSPK	C(UniMod:4)DGRTDC(UniMod:4)ENGSDELDC(UniMod:4)SPK	3	C(UniMod:4)DGRTDC(UniMod:4)ENGSDELDC(UniMod:4)SPK3	1625.52	1236.48	3070.39
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	CDIIAQGIVMAVK	C(UniMod:4)DIIAQGIVMAVK	2	C(UniMod:4)DIIAQGIVMAVK2	52309.8	54600.1	58628.2
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	CDIIAQGIVMAVK	C(UniMod:4)DIIAQGIVMAVK	3	C(UniMod:4)DIIAQGIVMAVK3	3145.04	1953.7	1886.12
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	CDIIVISGR	C(UniMod:4)DIIVISGR	2	C(UniMod:4)DIIVISGR2	4221.23	2113.05	
A0A0G2K2T1	A0A0G2K2T1	A0A0G2K2T1_RAT	Txlnb	Taxilin beta	1	CDISPSPESERDPAVVPGCESK	C(UniMod:4)DISPSPESERDPAVVPGC(UniMod:4)ESK	3	C(UniMod:4)DISPSPESERDPAVVPGC(UniMod:4)ESK3	3913.02	3946.15	
Q66HC5	Q66HC5	NUP93_RAT	Nup93	Nuclear pore complex protein Nup93	1	CDITDNQSEVADK	C(UniMod:4)DITDNQSEVADK	2	C(UniMod:4)DITDNQSEVADK2	5549.39	3997.88	2449.01
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	CDIYDTMHLR	C(UniMod:4)DIYDTMHLR	2	C(UniMod:4)DIYDTMHLR2	8837.11	5997.17	6246.88
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	CDIYDTMHLR	C(UniMod:4)DIYDTMHLR	3	C(UniMod:4)DIYDTMHLR3	34089.7	32302	17771.8
P63255	P63255	CRIP1_RAT	Crip1	Cysteine-rich protein 1	1	CDKEVYFAER	C(UniMod:4)DKEVYFAER	3	C(UniMod:4)DKEVYFAER3	23174.3	20448.4	18686.2
A0A8I6A6W3	A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	1	CDLCQEVLADIGFVK	C(UniMod:4)DLC(UniMod:4)QEVLADIGFVK	2	C(UniMod:4)DLC(UniMod:4)QEVLADIGFVK2	60373.9		70249.1
A0A8I6A6W3	A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	1	CDLCQEVLADIGFVK	C(UniMod:4)DLC(UniMod:4)QEVLADIGFVK	3	C(UniMod:4)DLC(UniMod:4)QEVLADIGFVK3	149819	97891.9	139375
P47824	P47824	P2RX1_RAT	P2rx1	P2X purinoceptor 1	1	CDLDWHVR	C(UniMod:4)DLDWHVR	2	C(UniMod:4)DLDWHVR2	24141.2	29297.9	16245.6
D4A3I5	D4A3I5	D4A3I5_RAT	Fhip2a	FHF complex subunit HOOK interacting protein 2A	1	CDLEAAFFEGHFLK	C(UniMod:4)DLEAAFFEGHFLK	3	C(UniMod:4)DLEAAFFEGHFLK3	12119.1	10774.1	12867.7
Q62636	Q62636;Q63942;P62836	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	0	CDLEDER	C(UniMod:4)DLEDER	1	C(UniMod:4)DLEDER1	31763.8	26315.2	33657.7
Q62636	Q62636;Q63942;P62836	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	0	CDLEDER	C(UniMod:4)DLEDER	2	C(UniMod:4)DLEDER2	2.45432e+06	3.06559e+06	3.6526e+06
Q62636	Q62636;P62836	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	0	CDLEDERVVGK	C(UniMod:4)DLEDERVVGK	2	C(UniMod:4)DLEDERVVGK2	29702	38962.7	29492.5
Q62636	Q62636;P62836	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	0	CDLEDERVVGK	C(UniMod:4)DLEDERVVGK	3	C(UniMod:4)DLEDERVVGK3	1.61029e+06	1.87867e+06	2.01951e+06
Q62636	Q62636;P62836	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	0	CDLEDERVVGKEQGQNLAR	C(UniMod:4)DLEDERVVGKEQGQNLAR	4	C(UniMod:4)DLEDERVVGKEQGQNLAR4	6411.91	4518.8	3815.35
Q63942	Q63942	RAB3D_RAT	Rab3d	GTP-binding protein Rab-3D	1	CDLEDERVVSAEDGQR	C(UniMod:4)DLEDERVVSAEDGQR	3	C(UniMod:4)DLEDERVVSAEDGQR3	30010.2	34110.9	42169.1
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	CDLEIQANGR	C(UniMod:4)DLEIQANGR	2	C(UniMod:4)DLEIQANGR2	1630.21		2712.31
P23785	P23785	GRN_RAT	Grn	Progranulin	1	CDLEVSCPDGYTCCR	C(UniMod:4)DLEVSC(UniMod:4)PDGYTC(UniMod:4)C(UniMod:4)R	2	C(UniMod:4)DLEVSC(UniMod:4)PDGYTC(UniMod:4)C(UniMod:4)R2	380830	516673	391974
P23785	P23785	GRN_RAT	Grn	Progranulin	1	CDLEVSCPDGYTCCR	C(UniMod:4)DLEVSC(UniMod:4)PDGYTC(UniMod:4)C(UniMod:4)R	3	C(UniMod:4)DLEVSC(UniMod:4)PDGYTC(UniMod:4)C(UniMod:4)R3	86040.4	98997.6	91418.2
D3ZHW0	D3ZHW0	D3ZHW0_RAT	Dhx29	ATP-dependent RNA helicase DHX29	1	CDLGSPEDFLSK	C(UniMod:4)DLGSPEDFLSK	2	C(UniMod:4)DLGSPEDFLSK2	4633.72		
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	CDLNMQQQEEEKAR	C(UniMod:4)DLNMQQQEEEKAR	3	C(UniMod:4)DLNMQQQEEEKAR3	1348.4		
D3ZCK2	D3ZCK2	D3ZCK2_RAT	Nkiras2	NFKB inhibitor interacting Ras-like 2	1	CDLQEQR	C(UniMod:4)DLQEQR	2	C(UniMod:4)DLQEQR2	5641.64	1786.49	3348.5
Q6GQP4	Q6GQP4	RAB31_RAT	Rab31	Ras-related protein Rab-31	1	CDLSDIR	C(UniMod:4)DLSDIR	2	C(UniMod:4)DLSDIR2	69492	42740	58485.2
B0BN19	B0BN19	B0BN19_RAT	Rab22a	RAB22A, member RAS oncogene family	1	CDLTDVR	C(UniMod:4)DLTDVR	2	C(UniMod:4)DLTDVR2	16376.7	8363.29	10960.1
Q6NYB7	Q6NYB7	RAB1A_RAT	Rab1A	Ras-related protein Rab-1A	1	CDLTTKK	C(UniMod:4)DLTTKK	2	C(UniMod:4)DLTTKK2			2480.02
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	CDLVNYSYGEATHWPNSGR	C(UniMod:4)DLVNYSYGEATHWPNSGR	3	C(UniMod:4)DLVNYSYGEATHWPNSGR3	33162.3	41848.2	35100.5
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	CDMCSNYEK	C(UniMod:4)DMC(UniMod:4)SNYEK	2	C(UniMod:4)DMC(UniMod:4)SNYEK2	3417.37	5118.77	3412.17
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CDMDQFQCK	C(UniMod:4)DMDQFQC(UniMod:4)K	2	C(UniMod:4)DMDQFQC(UniMod:4)K2	36188.3	49591.9	36873.8
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	CDMQTLEER	C(UniMod:4)DMQTLEER	2	C(UniMod:4)DMQTLEER2	26770.1	29657.5	28320.2
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	CDNCRRPGAAEPSPDGTTGHTYNQYTQR	C(UniMod:4)DNC(UniMod:4)RRPGAAEPSPDGTTGHTYNQYTQR	4	C(UniMod:4)DNC(UniMod:4)RRPGAAEPSPDGTTGHTYNQYTQR4	9451.49	11795.5	8701.83
Q9JIH7	A0A1W2Q671;Q9JIH7;A0A8I6AC38	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	0	CDNIFITGPTGSVK	C(UniMod:4)DNIFITGPTGSVK	2	C(UniMod:4)DNIFITGPTGSVK2	16061.7	5981.01	8651.53
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	CDNSCLTCNGPGFK	C(UniMod:4)DNSC(UniMod:4)LTC(UniMod:4)NGPGFK	2	C(UniMod:4)DNSC(UniMod:4)LTC(UniMod:4)NGPGFK2	14504.2	16667.4	16168.6
Q5PQQ8	Q5PQQ8	ITGBL_RAT	Itgbl1	Integrin beta-like protein 1	1	CDNSDGHGLIYGK	C(UniMod:4)DNSDGHGLIYGK	3	C(UniMod:4)DNSDGHGLIYGK3	17660.2	10431.6	21322.3
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	CDNVFITGPSGSVK	C(UniMod:4)DNVFITGPSGSVK	2	C(UniMod:4)DNVFITGPSGSVK2	24455	24679.1	36096.4
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	CDPACSSPACLYDNFDCYSGGR	C(UniMod:4)DPAC(UniMod:4)SSPAC(UniMod:4)LYDNFDC(UniMod:4)YSGGR	3	C(UniMod:4)DPAC(UniMod:4)SSPAC(UniMod:4)LYDNFDC(UniMod:4)YSGGR3	8033.88	7663.27	5299.12
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	CDPAGYYCGFK	C(UniMod:4)DPAGYYC(UniMod:4)GFK	2	C(UniMod:4)DPAGYYC(UniMod:4)GFK2	3.46737e+06	3.72898e+06	4.27779e+06
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	CDPDQGHLSVDQSK	C(UniMod:4)DPDQGHLSVDQSK	3	C(UniMod:4)DPDQGHLSVDQSK3	23024.1	16875.3	22567.9
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	CDPGWLGHR	C(UniMod:4)DPGWLGHR	2	C(UniMod:4)DPGWLGHR2	22621	21003.1	16571.3
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	CDPHEATCYDDGK	C(UniMod:4)DPHEATC(UniMod:4)YDDGK	2	C(UniMod:4)DPHEATC(UniMod:4)YDDGK2	159483	156123	3.11574e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	CDPHEATCYDDGK	C(UniMod:4)DPHEATC(UniMod:4)YDDGK	3	C(UniMod:4)DPHEATC(UniMod:4)YDDGK3	191262	242662	7.40723e+06
A0A1B0GWP1	A0A1B0GWP1	A0A1B0GWP1_RAT	Elovl1	Elongation of very long chain fatty acids protein 1	1	CDPVDFSNNPEALR	C(UniMod:4)DPVDFSNNPEALR	2	C(UniMod:4)DPVDFSNNPEALR2	20486.6	19691.3	17799.1
D3ZUV3	D3ZUV3	D3ZUV3_RAT	Eif2a	Eukaryotic translation initiation factor 2A	1	CDPVFDFGTGPR	C(UniMod:4)DPVFDFGTGPR	2	C(UniMod:4)DPVFDFGTGPR2		8283.62	
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	CDPYQPGFGSVLLK	C(UniMod:4)DPYQPGFGSVLLK	2	C(UniMod:4)DPYQPGFGSVLLK2	10019.1	10998	5766
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	CDQCEENYFYNR	C(UniMod:4)DQC(UniMod:4)EENYFYNR	2	C(UniMod:4)DQC(UniMod:4)EENYFYNR2	8473.41	10292.3	17096.8
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	CDQGWLGSMCECSEEDYRPSQQEECSPK	C(UniMod:4)DQGWLGSMC(UniMod:4)EC(UniMod:4)SEEDYRPSQQEEC(UniMod:4)SPK	4	C(UniMod:4)DQGWLGSMC(UniMod:4)EC(UniMod:4)SEEDYRPSQQEEC(UniMod:4)SPK4	310504	264204	288988
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	CDQVTGACICPTGWWGHR	C(UniMod:4)DQVTGAC(UniMod:4)IC(UniMod:4)PTGWWGHR	3	C(UniMod:4)DQVTGAC(UniMod:4)IC(UniMod:4)PTGWWGHR3	92047.8	79595.1	89334.7
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	CDRDLDELIVQHYTELTTAIR	C(UniMod:4)DRDLDELIVQHYTELTTAIR	4	C(UniMod:4)DRDLDELIVQHYTELTTAIR4	10201.6	10619.8	13410.7
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	CDRVDQLAAQLADLAAR	C(UniMod:4)DRVDQLAAQLADLAAR	2	C(UniMod:4)DRVDQLAAQLADLAAR2	21689.2	33861	22349
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	CDRVDQLAAQLADLAAR	C(UniMod:4)DRVDQLAAQLADLAAR	3	C(UniMod:4)DRVDQLAAQLADLAAR3	207597	143950	156749
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	CDSHGTHLAGVVSGR	C(UniMod:4)DSHGTHLAGVVSGR	2	C(UniMod:4)DSHGTHLAGVVSGR2	10854.5	9179.28	5316.22
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	CDSHGTHLAGVVSGR	C(UniMod:4)DSHGTHLAGVVSGR	3	C(UniMod:4)DSHGTHLAGVVSGR3	109356	98585.6	77852.7
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	CDSHGTHLAGVVSGR	C(UniMod:4)DSHGTHLAGVVSGR	4	C(UniMod:4)DSHGTHLAGVVSGR4	505579	454960	433242
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	CDSSKWCHDNGVNYK	C(UniMod:4)DSSKWC(UniMod:4)HDNGVNYK	3	C(UniMod:4)DSSKWC(UniMod:4)HDNGVNYK3	4489.55	1275.42	
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	CDSSPCFR	C(UniMod:4)DSSPC(UniMod:4)FR	2	C(UniMod:4)DSSPC(UniMod:4)FR2	23357.8	5.31525e+06	5.8568e+06
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	CDSSPCFRGVR	C(UniMod:4)DSSPC(UniMod:4)FRGVR	3	C(UniMod:4)DSSPC(UniMod:4)FRGVR3	12011.8	18058.7	20224.3
P98166	P98166	VLDLR_RAT	Vldlr	Very low-density lipoprotein receptor	1	CDSSQFQCTNGR	C(UniMod:4)DSSQFQC(UniMod:4)TNGR	2	C(UniMod:4)DSSQFQC(UniMod:4)TNGR2	3972.99	3177.39	5768.13
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	CDTAVGTPDYISPEVLK	C(UniMod:4)DTAVGTPDYISPEVLK	2	C(UniMod:4)DTAVGTPDYISPEVLK2	11498.1	12057.6	15650.3
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	CDTCDMNVHK	C(UniMod:4)DTC(UniMod:4)DMNVHK	2	C(UniMod:4)DTC(UniMod:4)DMNVHK2	30482.7	31521.2	25668.5
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	CDTCDMNVHK	C(UniMod:4)DTC(UniMod:4)DMNVHK	3	C(UniMod:4)DTC(UniMod:4)DMNVHK3	203370	212035	
P68403	P68403	KPCB_RAT	Prkcb	Protein kinase C beta type	1	CDTCMMNVHK	C(UniMod:4)DTC(UniMod:4)MMNVHK	3	C(UniMod:4)DTC(UniMod:4)MMNVHK3	11275.5	4401.04	4212.36
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CDTEDDCGDHSDEPPDCPEFK	C(UniMod:4)DTEDDC(UniMod:4)GDHSDEPPDC(UniMod:4)PEFK	3	C(UniMod:4)DTEDDC(UniMod:4)GDHSDEPPDC(UniMod:4)PEFK3	16894.6	18174.4	19595.8
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	CDTGKPVLR	C(UniMod:4)DTGKPVLR	2	C(UniMod:4)DTGKPVLR2	22080.2	16735	15198.8
D3ZRN3	P60711;P63259;A0A8I6AKY5;D3ZRN3	D3ZRN3_RAT	Actbl2	Actin, beta-like 2	0	CDVDIRK	C(UniMod:4)DVDIRK	2	C(UniMod:4)DVDIRK2	8340.5	5650.12	3.13736e+06
P60711	P60711;P63259	ACTB_RAT	Actb	Actin, cytoplasmic 1	0	CDVDIRKDLYANTVLSGGTTMYPGIADR	C(UniMod:4)DVDIRKDLYANTVLSGGTTMYPGIADR	4	C(UniMod:4)DVDIRKDLYANTVLSGGTTMYPGIADR4	42679.6	34634.1	39739
Q5PQQ8	Q5PQQ8	ITGBL_RAT	Itgbl1	Integrin beta-like protein 1	1	CDVGWSGEACQYPTK	C(UniMod:4)DVGWSGEAC(UniMod:4)QYPTK	2	C(UniMod:4)DVGWSGEAC(UniMod:4)QYPTK2	8987.46	8434.51	15042.9
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	CDVQLELQPVCTPPCAPQAVCR	C(UniMod:4)DVQLELQPVC(UniMod:4)TPPC(UniMod:4)APQAVC(UniMod:4)R	3	C(UniMod:4)DVQLELQPVC(UniMod:4)TPPC(UniMod:4)APQAVC(UniMod:4)R3	5218.96	2692.76	2755.31
Q64591	Q64591	DECR_RAT	Decr1	2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], mitochondrial	1	CDVRDPDMVHNTVLELIK	C(UniMod:4)DVRDPDMVHNTVLELIK	4	C(UniMod:4)DVRDPDMVHNTVLELIK4	1851.78		3476.5
P17945	P17945	HGF_RAT	Hgf	Hepatocyte growth factor	1	CDVSSGQDCYR	C(UniMod:4)DVSSGQDC(UniMod:4)YR	2	C(UniMod:4)DVSSGQDC(UniMod:4)YR2	3886.66	2936.39	3147.71
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	CDYCATTLR	C(UniMod:4)DYC(UniMod:4)ATTLR	2	C(UniMod:4)DYC(UniMod:4)ATTLR2			3168.06
P97881	P97881	MUC13_RAT	Muc13	Mucin-13	1	CDYYGCVK	C(UniMod:4)DYYGC(UniMod:4)VK	2	C(UniMod:4)DYYGC(UniMod:4)VK2	7142.28	6058.87	7277.31
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	CEAACGGFLTK	C(UniMod:4)EAAC(UniMod:4)GGFLTK	2	C(UniMod:4)EAAC(UniMod:4)GGFLTK2	29731.1	29613.1	31885.4
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	CEAALAR	C(UniMod:4)EAALAR	2	C(UniMod:4)EAALAR2		8961.01	6582.38
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	CEAFGWHAIIVDGHSVEELCK	C(UniMod:4)EAFGWHAIIVDGHSVEELC(UniMod:4)K	4	C(UniMod:4)EAFGWHAIIVDGHSVEELC(UniMod:4)K4	1257.71	4082.01	2288.64
P13107	P13107	CP2B3_RAT	Cyp2b3	Cytochrome P450 2B3	1	CEAFMPFSIGK	C(UniMod:4)EAFMPFSIGK	2	C(UniMod:4)EAFMPFSIGK2		2774.06	
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	CEALGVPMTK	C(UniMod:4)EALGVPMTK	2	C(UniMod:4)EALGVPMTK2	34647.1	40922.1	38137.3
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	CEAPAEFPNGK	C(UniMod:4)EAPAEFPNGK	2	C(UniMod:4)EAPAEFPNGK2	43110.4	37587.5	43000.1
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	CEAQQELR	C(UniMod:4)EAQQELR	2	C(UniMod:4)EAQQELR2	128260	122913	133103
Q6AYP5	Q6AYP5	CADM1_RAT	Cadm1	Cell adhesion molecule 1	1	CEASNTVGK	C(UniMod:4)EASNTVGK	2	C(UniMod:4)EASNTVGK2			34728.3
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	CEAVCGK	C(UniMod:4)EAVC(UniMod:4)GK	1	C(UniMod:4)EAVC(UniMod:4)GK1			4385.56
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	CEAVCGK	C(UniMod:4)EAVC(UniMod:4)GK	2	C(UniMod:4)EAVC(UniMod:4)GK2			7702.83
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	CEAVCGKPK	C(UniMod:4)EAVC(UniMod:4)GKPK	2	C(UniMod:4)EAVC(UniMod:4)GKPK2			20085.9
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	CEAVIADILDK	C(UniMod:4)EAVIADILDK	2	C(UniMod:4)EAVIADILDK2	1903.73	2632.21	3636.1
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	CECAAGFK	C(UniMod:4)EC(UniMod:4)AAGFK	2	C(UniMod:4)EC(UniMod:4)AAGFK2	9755.51	10083.8	13728.8
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CECDMGFVPSADGK	C(UniMod:4)EC(UniMod:4)DMGFVPSADGK	2	C(UniMod:4)EC(UniMod:4)DMGFVPSADGK2	74569.7	112609	71272.3
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CECEIGYELDR	C(UniMod:4)EC(UniMod:4)EIGYELDR	2	C(UniMod:4)EC(UniMod:4)EIGYELDR2	27595.3	20156	25445.3
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	CECEMGFTPASDSR	C(UniMod:4)EC(UniMod:4)EMGFTPASDSR	2	C(UniMod:4)EC(UniMod:4)EMGFTPASDSR2	4029.02	3290	5288.91
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CECFPGLAVGLDGR	C(UniMod:4)EC(UniMod:4)FPGLAVGLDGR	2	C(UniMod:4)EC(UniMod:4)FPGLAVGLDGR2	43960.3	65152.2	46712.1
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	CECICPAGFQGVACEVTNR	C(UniMod:4)EC(UniMod:4)IC(UniMod:4)PAGFQGVAC(UniMod:4)EVTNR	3	C(UniMod:4)EC(UniMod:4)IC(UniMod:4)PAGFQGVAC(UniMod:4)EVTNR3	95873	99900.5	100638
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	CECICPAGFQGVACEVTNRK	C(UniMod:4)EC(UniMod:4)IC(UniMod:4)PAGFQGVAC(UniMod:4)EVTNRK	3	C(UniMod:4)EC(UniMod:4)IC(UniMod:4)PAGFQGVAC(UniMod:4)EVTNRK3	192741	223222	256091
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	CECLSGLCAFPVCEVGSTPR	C(UniMod:4)EC(UniMod:4)LSGLC(UniMod:4)AFPVC(UniMod:4)EVGSTPR	3	C(UniMod:4)EC(UniMod:4)LSGLC(UniMod:4)AFPVC(UniMod:4)EVGSTPR3	51933.2	42250.8	42342.8
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	CECNMGYK	C(UniMod:4)EC(UniMod:4)NMGYK	2	C(UniMod:4)EC(UniMod:4)NMGYK2	1587.9	2790.3	3597.78
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	CECPLGR	C(UniMod:4)EC(UniMod:4)PLGR	2	C(UniMod:4)EC(UniMod:4)PLGR2	22135.8	32997.1	23675.6
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CECPSGMTLDATGR	C(UniMod:4)EC(UniMod:4)PSGMTLDATGR	2	C(UniMod:4)EC(UniMod:4)PSGMTLDATGR2	87435.9	109348	83631.8
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CECPVGFFYNDK	C(UniMod:4)EC(UniMod:4)PVGFFYNDK	2	C(UniMod:4)EC(UniMod:4)PVGFFYNDK2	27751.2	46086.5	39427.8
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	CECSTIR	C(UniMod:4)EC(UniMod:4)STIR	2	C(UniMod:4)EC(UniMod:4)STIR2	36153.7	20934.4	36135.2
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	CEDGEMFSK	C(UniMod:4)EDGEMFSK	2	C(UniMod:4)EDGEMFSK2	37770.6	27262.8	30661.6
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	CEDGQCICHEGFTGLDCGQR	C(UniMod:4)EDGQC(UniMod:4)IC(UniMod:4)HEGFTGLDC(UniMod:4)GQR	3	C(UniMod:4)EDGQC(UniMod:4)IC(UniMod:4)HEGFTGLDC(UniMod:4)GQR3	135758	161224	140795
B5DF57	B5DF57	B5DF57_RAT	Epb42	protein-glutamine gamma-glutamyltransferase	1	CEDITQNYK	C(UniMod:4)EDITQNYK	2	C(UniMod:4)EDITQNYK2	9707	6597.13	4079.4
Q5PQQ8	Q5PQQ8	ITGBL_RAT	Itgbl1	Integrin beta-like protein 1	1	CEDLDGVVCGGR	C(UniMod:4)EDLDGVVC(UniMod:4)GGR	2	C(UniMod:4)EDLDGVVC(UniMod:4)GGR2	15011.4	23110.3	8861.47
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	CEDLTTGK	C(UniMod:4)EDLTTGK	2	C(UniMod:4)EDLTTGK2	19603.8	24874.3	23369.6
Q62720	Q62720	ZNT1_RAT	Slc30a1	Proton-coupled zinc antiporter SLC30A1	1	CEDPASYMQVAK	C(UniMod:4)EDPASYMQVAK	2	C(UniMod:4)EDPASYMQVAK2	75762.5	71077.9	72501.1
O35370	O35370	O35370_RAT	Thbd	Thrombomodulin	1	CEDVDDCK	C(UniMod:4)EDVDDC(UniMod:4)K	2	C(UniMod:4)EDVDDC(UniMod:4)K2			17095.2
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	CEEEEEEEEEEKEEGELDPGSRPALFSR	C(UniMod:4)EEEEEEEEEEKEEGELDPGSRPALFSR	4	C(UniMod:4)EEEEEEEEEEKEEGELDPGSRPALFSR4	75529.5	54636.6	49754.6
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	CEEEIAK	C(UniMod:4)EEEIAK	2	C(UniMod:4)EEEIAK2	33692	26109.3	
D3ZBX9	D3ZBX9	D3ZBX9_RAT	Ccdc92	Coiled-coil domain containing 92	1	CEELEAQLK	C(UniMod:4)EELEAQLK	2	C(UniMod:4)EELEAQLK2	4273.17		4752.32
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	CEELEKEISELR	C(UniMod:4)EELEKEISELR	3	C(UniMod:4)EELEKEISELR3	4957.08	4910.2	7012.55
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	CEELQHLCDHFASEVTR	C(UniMod:4)EELQHLC(UniMod:4)DHFASEVTR	3	C(UniMod:4)EELQHLC(UniMod:4)DHFASEVTR3	1463.26	1419.38	3603.96
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	CEELQHLCDHFASEVTR	C(UniMod:4)EELQHLC(UniMod:4)DHFASEVTR	4	C(UniMod:4)EELQHLC(UniMod:4)DHFASEVTR4	11666.1	4512.74	3897.49
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	CEELSDLHGQLK	C(UniMod:4)EELSDLHGQLK	2	C(UniMod:4)EELSDLHGQLK2	3895.9	4051.1	4270.15
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	CEELSDLHGQLK	C(UniMod:4)EELSDLHGQLK	3	C(UniMod:4)EELSDLHGQLK3	10412.5	13291.8	16813.2
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	CEEYWPSK	C(UniMod:4)EEYWPSK	2	C(UniMod:4)EEYWPSK2	207042	153859	219879
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	CEFAVGYQR	C(UniMod:4)EFAVGYQR	2	C(UniMod:4)EFAVGYQR2	27037.9	31134.8	26354.2
M0R915	M0R915;A0A8I6GLQ4	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	0	CEFLQSK	C(UniMod:4)EFLQSK	2	C(UniMod:4)EFLQSK2	24526.2	21550.1	20717.4
Q5PQQ8	Q5PQQ8	ITGBL_RAT	Itgbl1	Integrin beta-like protein 1	1	CEFQCDITPWESK	C(UniMod:4)EFQC(UniMod:4)DITPWESK	2	C(UniMod:4)EFQC(UniMod:4)DITPWESK2	13934.9	13077.9	11784.1
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	CEFQDAYVLLSEK	C(UniMod:4)EFQDAYVLLSEK	2	C(UniMod:4)EFQDAYVLLSEK2	65725.5	59369.1	67326.8
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	CEFQDAYVLLSEK	C(UniMod:4)EFQDAYVLLSEK	3	C(UniMod:4)EFQDAYVLLSEK3	51963.4	39346.9	41504.4
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	CEFQDAYVLLSEKK	C(UniMod:4)EFQDAYVLLSEKK	2	C(UniMod:4)EFQDAYVLLSEKK2			3009.77
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	CEFQDAYVLLSEKK	C(UniMod:4)EFQDAYVLLSEKK	3	C(UniMod:4)EFQDAYVLLSEKK3	39660.2	60338.8	62805.5
A0A0G2K542	A0A0G2K542	A0A0G2K542_RAT	Ugp2	UTP--glucose-1-phosphate uridylyltransferase	1	CEFVMEVTNK	C(UniMod:4)EFVMEVTNK	2	C(UniMod:4)EFVMEVTNK2	1858.89	3715.08	11097.8
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	CEGETDFICR	C(UniMod:4)EGETDFIC(UniMod:4)R	2	C(UniMod:4)EGETDFIC(UniMod:4)R2	1.03661e+06	895612	890102
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	CEGFVCAQTGR	C(UniMod:4)EGFVC(UniMod:4)AQTGR	2	C(UniMod:4)EGFVC(UniMod:4)AQTGR2	186689	181509	187717
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	CEGGVDAALQYAK	C(UniMod:4)EGGVDAALQYAK	2	C(UniMod:4)EGGVDAALQYAK2	208855	241240	247056
P35427	P35427;A0A8I6GK92	RL13A_RAT	Rpl13a	Large ribosomal subunit protein uL13	0	CEGINISGNFYR	C(UniMod:4)EGINISGNFYR	2	C(UniMod:4)EGINISGNFYR2	19411.5	21735.3	12754.9
D4ACD2	D4ACD2	D4ACD2_RAT	Bach1	BTB domain and CNC homolog 1	1	CEGMKPAMER	C(UniMod:4)EGMKPAMER	3	C(UniMod:4)EGMKPAMER3	3615.2	3143.19	5726.62
Q8CIZ5	F1LVL9;Q8CIZ5	DMBT1_RAT	Dmbt1	Deleted in malignant brain tumors 1 protein	0	CEGRVEILYR	C(UniMod:4)EGRVEILYR	3	C(UniMod:4)EGRVEILYR3	13437.8	23683.2	13099.4
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	CEGSSVQTR	C(UniMod:4)EGSSVQTR	2	C(UniMod:4)EGSSVQTR2			5.72068e+06
D4A482	D4A482	D4A482_RAT	Mfsd2b	Major facilitator superfamily domain containing 2B	1	CEGTVHPTSTAVSPDVAR	C(UniMod:4)EGTVHPTSTAVSPDVAR	3	C(UniMod:4)EGTVHPTSTAVSPDVAR3	13154.7	19260.5	14602
O35806	O35806	LTBP2_RAT	Ltbp2	Latent-transforming growth factor beta-binding protein 2	1	CEHCPLPGTEAFR	C(UniMod:4)EHC(UniMod:4)PLPGTEAFR	3	C(UniMod:4)EHC(UniMod:4)PLPGTEAFR3	7297.04	10876	4092.75
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	CEHDGVMTGANGEVSFINIK	C(UniMod:4)EHDGVMTGANGEVSFINIK	3	C(UniMod:4)EHDGVMTGANGEVSFINIK3	39080.5	38570	33934.7
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	CEHEEEKEDLER	C(UniMod:4)EHEEEKEDLER	2	C(UniMod:4)EHEEEKEDLER2			2183.21
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	CEHEEEKEDLER	C(UniMod:4)EHEEEKEDLER	3	C(UniMod:4)EHEEEKEDLER3	370.083		
Q9QUR2	Q9QUR2	DCTN4_RAT	Dctn4	Dynactin subunit 4	1	CEHNLSKPEFNPTSIK	C(UniMod:4)EHNLSKPEFNPTSIK	3	C(UniMod:4)EHNLSKPEFNPTSIK3	3790.41	4890.36	
Q9QUR2	Q9QUR2	DCTN4_RAT	Dctn4	Dynactin subunit 4	1	CEHNLSKPEFNPTSIK	C(UniMod:4)EHNLSKPEFNPTSIK	4	C(UniMod:4)EHNLSKPEFNPTSIK4	33723.3	34729.8	40330.7
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	CEHPPPGPVCGSDGVTYLSACELR	C(UniMod:4)EHPPPGPVC(UniMod:4)GSDGVTYLSAC(UniMod:4)ELR	3	C(UniMod:4)EHPPPGPVC(UniMod:4)GSDGVTYLSAC(UniMod:4)ELR3		5846.7	1941.8
D4A3W2	D4A3W2	D4A3W2_RAT	Crb2	Crumbs cell polarity complex component 2	1	CEIHADPCR	C(UniMod:4)EIHADPC(UniMod:4)R	3	C(UniMod:4)EIHADPC(UniMod:4)R3	5885.94	4352.13	
A0A8I6AVP7	A0A8I6AVP7	A0A8I6AVP7_RAT	Odr4	Protein odr-4 homolog	1	CEILFEDLLLNETPEKK	C(UniMod:4)EILFEDLLLNETPEKK	3	C(UniMod:4)EILFEDLLLNETPEKK3	3333.23	5841.5	4634.86
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CEININGATLK	C(UniMod:4)EININGATLK	2	C(UniMod:4)EININGATLK2	22624.7	22771.1	32630.8
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	CEIQEAVSR	C(UniMod:4)EIQEAVSR	2	C(UniMod:4)EIQEAVSR2	38592.7	49244	30332.5
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	CEKPCPLGTFGK	C(UniMod:4)EKPC(UniMod:4)PLGTFGK	2	C(UniMod:4)EKPC(UniMod:4)PLGTFGK2	3239.76	6373.24	2719.87
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	CEKPCPLGTFGK	C(UniMod:4)EKPC(UniMod:4)PLGTFGK	3	C(UniMod:4)EKPC(UniMod:4)PLGTFGK3	36441.9	36334.5	44857
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	CELCDDGYFGDPLGSNGPVR	C(UniMod:4)ELC(UniMod:4)DDGYFGDPLGSNGPVR	3	C(UniMod:4)ELC(UniMod:4)DDGYFGDPLGSNGPVR3	9265.46	8720.06	7018.75
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	CELDAACPR	C(UniMod:4)ELDAAC(UniMod:4)PR	2	C(UniMod:4)ELDAAC(UniMod:4)PR2	3176.94	4753.1	7213.22
Q69BT7	Q69BT7	TPPC4_RAT	Trappc4	Trafficking protein particle complex subunit 4	1	CELFDQNLK	C(UniMod:4)ELFDQNLK	2	C(UniMod:4)ELFDQNLK2	35288.8	25517.2	23225.6
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	CELHYEK	C(UniMod:4)ELHYEK	2	C(UniMod:4)ELHYEK2	117599	78060.9	70928
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	CELLSDGSLAICSPR	C(UniMod:4)ELLSDGSLAIC(UniMod:4)SPR	2	C(UniMod:4)ELLSDGSLAIC(UniMod:4)SPR2	56785.7	50465.7	50967.5
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	CELLSDGSLAICSPR	C(UniMod:4)ELLSDGSLAIC(UniMod:4)SPR	3	C(UniMod:4)ELLSDGSLAIC(UniMod:4)SPR3	8287.64	9616.71	9328.54
E9PSY0	E9PSY0	E9PSY0_RAT	Axl	receptor protein-tyrosine kinase	1	CELQVQGEPPEVMWLR	C(UniMod:4)ELQVQGEPPEVMWLR	3	C(UniMod:4)ELQVQGEPPEVMWLR3	11177.8	12072.4	6726.17
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	CELSSSVQTDINLPYLTMDASGPK	C(UniMod:4)ELSSSVQTDINLPYLTMDASGPK	3	C(UniMod:4)ELSSSVQTDINLPYLTMDASGPK3	8562.43	12699.4	14610.2
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	CELSTACDGGELK	C(UniMod:4)ELSTAC(UniMod:4)DGGELK	2	C(UniMod:4)ELSTAC(UniMod:4)DGGELK2	17222.1	16467.5	14957.5
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	CELSVEK	C(UniMod:4)ELSVEK	2	C(UniMod:4)ELSVEK2	17039.3	8406.93	12759.3
F1LTR1	F1LTR1	WDR26_RAT	Wdr26	WD repeat-containing protein 26	1	CELTPLK	C(UniMod:4)ELTPLK	2	C(UniMod:4)ELTPLK2	7334.72	8537.77	5622.21
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	CELTSLQAHEK	C(UniMod:4)ELTSLQAHEK	2	C(UniMod:4)ELTSLQAHEK2	621751	634751	549425
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	CELTSLQAHEK	C(UniMod:4)ELTSLQAHEK	3	C(UniMod:4)ELTSLQAHEK3	3.35603e+06	4.29529e+06	4.20898e+06
Q6IFU8	Q6IFV1;Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	0	CEMEQQNQEYK	C(UniMod:4)EMEQQNQEYK	2	C(UniMod:4)EMEQQNQEYK2	1561.35	3824.47	7423.48
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	CEMPELVQHK	C(UniMod:4)EMPELVQHK	2	C(UniMod:4)EMPELVQHK2	12204.1	15314.5	10618.3
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	CEMPELVQHK	C(UniMod:4)EMPELVQHK	3	C(UniMod:4)EMPELVQHK3	38016.6	42122.7	38695
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	CENLANDVNSFEVK	C(UniMod:4)ENLANDVNSFEVK	2	C(UniMod:4)ENLANDVNSFEVK2	34467.4	30442	35633.2
P51111	P51111	HD_RAT	Htt	Huntingtin	1	CENLSTPTTLK	C(UniMod:4)ENLSTPTTLK	2	C(UniMod:4)ENLSTPTTLK2	4799.89	2327.83	6612.08
P51111	P51111	HD_RAT	Htt	Huntingtin	1	CENLSTPTTLKK	C(UniMod:4)ENLSTPTTLKK	3	C(UniMod:4)ENLSTPTTLKK3	18621.2	24083.7	13479.7
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	CENTEGSFK	C(UniMod:4)ENTEGSFK	2	C(UniMod:4)ENTEGSFK2	4322.9	10279.2	5989.77
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	CENTPGSFR	C(UniMod:4)ENTPGSFR	2	C(UniMod:4)ENTPGSFR2	5951.72	6251.9	4035.16
A0A0G2K0W3	A0A0G2K0W3	A0A0G2K0W3_RAT	Ttyh3	Protein tweety homolog	1	CENTPLIGR	C(UniMod:4)ENTPLIGR	2	C(UniMod:4)ENTPLIGR2	5071.43	6927.2	5633.15
P15473	P15473	IBP3_RAT	Igfbp3	Insulin-like growth factor-binding protein 3	1	CEPCDAR	C(UniMod:4)EPC(UniMod:4)DAR	2	C(UniMod:4)EPC(UniMod:4)DAR2			19208.8
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	CEPGFWNFR	C(UniMod:4)EPGFWNFR	2	C(UniMod:4)EPGFWNFR2	32985.9	34927.7	26588.2
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	CEPIAMTVPR	C(UniMod:4)EPIAMTVPR	2	C(UniMod:4)EPIAMTVPR2	1.71451e+06	1.28871e+06	1.43185e+06
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	CEPIAMTVPR	C(UniMod:4)EPIAMTVPR	3	C(UniMod:4)EPIAMTVPR3	9117.49	7871.31	8020.94
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	CEPIGCDGVLFSTHTLDK	C(UniMod:4)EPIGC(UniMod:4)DGVLFSTHTLDK	3	C(UniMod:4)EPIGC(UniMod:4)DGVLFSTHTLDK3	318238	348815	381065
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	CEPIIMTVPR	C(UniMod:4)EPIIMTVPR	2	C(UniMod:4)EPIIMTVPR2	639856	673931	631230
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	CEPIIMTVPR	C(UniMod:4)EPIIMTVPR	3	C(UniMod:4)EPIIMTVPR3	8414.06	9957.98	10866.8
O89046	Q920J3;O89046	COR1B_RAT	Coro1b	Coronin-1B	0	CEPIVMTVPR	C(UniMod:4)EPIVMTVPR	2	C(UniMod:4)EPIVMTVPR2	2.12661e+06	2.07668e+06	2.21594e+06
O89046	Q920J3;O89046	COR1B_RAT	Coro1b	Coronin-1B	0	CEPIVMTVPR	C(UniMod:4)EPIVMTVPR	3	C(UniMod:4)EPIVMTVPR3	20521.3	18297.6	25886.4
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	CEQDREPLR	C(UniMod:4)EQDREPLR	2	C(UniMod:4)EQDREPLR2		5327.82	
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	CEQDREPLR	C(UniMod:4)EQDREPLR	3	C(UniMod:4)EQDREPLR3	112655	56555.4	
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	CEQEVPK	C(UniMod:4)EQEVPK	1	C(UniMod:4)EQEVPK1	1.35519e+06	1.3231e+06	1.19762e+06
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	CEQEVPK	C(UniMod:4)EQEVPK	2	C(UniMod:4)EQEVPK2	18423	25230.9	1611.61
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	CEQEVPKDCEHVFAGK	C(UniMod:4)EQEVPKDC(UniMod:4)EHVFAGK	2	C(UniMod:4)EQEVPKDC(UniMod:4)EHVFAGK2	130504	96385.8	93246.8
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	CEQEVPKDCEHVFAGK	C(UniMod:4)EQEVPKDC(UniMod:4)EHVFAGK	3	C(UniMod:4)EQEVPKDC(UniMod:4)EHVFAGK3	972792	1.04122e+06	1.05776e+06
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	CEQEVPKDCEHVFAGK	C(UniMod:4)EQEVPKDC(UniMod:4)EHVFAGK	4	C(UniMod:4)EQEVPKDC(UniMod:4)EHVFAGK4	1.6871e+06	2.32096e+06	2.51209e+06
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	CEQEVPKDCEHVFAGKK	C(UniMod:4)EQEVPKDC(UniMod:4)EHVFAGKK	3	C(UniMod:4)EQEVPKDC(UniMod:4)EHVFAGKK3	11917.9	11846.1	23413.8
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	CEQEVPKDCEHVFAGKK	C(UniMod:4)EQEVPKDC(UniMod:4)EHVFAGKK	4	C(UniMod:4)EQEVPKDC(UniMod:4)EHVFAGKK4		30816.7	9251.87
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	CEQEVQSQDQENTSILK	C(UniMod:4)EQEVQSQDQENTSILK	3	C(UniMod:4)EQEVQSQDQENTSILK3	18692.9	23235.5	20689.4
Q66HA4	Q66HA4	TAXB1_RAT	Tax1bp1	Tax1-binding protein 1 homolog	1	CEQLQAEQK	C(UniMod:4)EQLQAEQK	2	C(UniMod:4)EQLQAEQK2		3157.24	
A0A0G2K3L8	A0A0G2K3L8	A0A0G2K3L8_RAT	Wdfy1	WD repeat and FYVE domain containing 1	1	CEQPFFWNIK	C(UniMod:4)EQPFFWNIK	2	C(UniMod:4)EQPFFWNIK2	21680.6	10124.3	9532.26
Q9ESM0	Q9ESM0	IP6K1_RAT	Ip6k1	Inositol hexakisphosphate kinase 1	1	CEQSTSASLGVR	C(UniMod:4)EQSTSASLGVR	2	C(UniMod:4)EQSTSASLGVR2	2535.32		
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	CEQTCVNSPGSYTCHCNGR	C(UniMod:4)EQTC(UniMod:4)VNSPGSYTC(UniMod:4)HC(UniMod:4)NGR	3	C(UniMod:4)EQTC(UniMod:4)VNSPGSYTC(UniMod:4)HC(UniMod:4)NGR3	2585.81	1832.26	
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	CEQVESWMVAR	C(UniMod:4)EQVESWMVAR	2	C(UniMod:4)EQVESWMVAR2	11278.7	9904.21	11454.8
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	CEQVLIEK	C(UniMod:4)EQVLIEK	2	C(UniMod:4)EQVLIEK2	52509.3	53912.8	53341.7
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	CERHVLQSASAGSGSFTDVR	C(UniMod:4)ERHVLQSASAGSGSFTDVR	3	C(UniMod:4)ERHVLQSASAGSGSFTDVR3	6958.65	7518.58	10210.2
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	CERHVLQSASAGSGSFTDVR	C(UniMod:4)ERHVLQSASAGSGSFTDVR	4	C(UniMod:4)ERHVLQSASAGSGSFTDVR4	7691.34	7097.51	8576.41
P83732	P83732;M0RBD1	RL24_RAT	Rpl24	Large ribosomal subunit protein eL24	0	CESAFLSK	C(UniMod:4)ESAFLSK	2	C(UniMod:4)ESAFLSK2	7388.53	7214.5	10506.1
P35565	P35565	CALX_RAT	Canx	Calnexin	1	CESAPGCGVWQR	C(UniMod:4)ESAPGC(UniMod:4)GVWQR	2	C(UniMod:4)ESAPGC(UniMod:4)GVWQR2	782507	679217	692212
P35565	P35565	CALX_RAT	Canx	Calnexin	1	CESAPGCGVWQR	C(UniMod:4)ESAPGC(UniMod:4)GVWQR	3	C(UniMod:4)ESAPGC(UniMod:4)GVWQR3	7570.32	10113.1	10046.5
P35565	P35565	CALX_RAT	Canx	Calnexin	1	CESAPGCGVWQRPMIDNPNYK	C(UniMod:4)ESAPGC(UniMod:4)GVWQRPMIDNPNYK	3	C(UniMod:4)ESAPGC(UniMod:4)GVWQRPMIDNPNYK3	819636	948213	1.06236e+06
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	CESCAPGYEGNPIQPGGK	C(UniMod:4)ESC(UniMod:4)APGYEGNPIQPGGK	2	C(UniMod:4)ESC(UniMod:4)APGYEGNPIQPGGK2	44701.3	37884.4	45297.4
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	CESCAPGYEGNPIQPGGK	C(UniMod:4)ESC(UniMod:4)APGYEGNPIQPGGK	3	C(UniMod:4)ESC(UniMod:4)APGYEGNPIQPGGK3	18954.6	15140.8	14172.9
D3ZU83	D3ZU83	D3ZU83_RAT	Ergic3	Endoplasmic reticulum-Golgi intermediate compartment protein	1	CESCYGAESEDIK	C(UniMod:4)ESC(UniMod:4)YGAESEDIK	2	C(UniMod:4)ESC(UniMod:4)YGAESEDIK2	1544.99	2302.66	3250.15
Q499Q1	Q499Q1	Q499Q1_RAT	Rnf126	RING-type E3 ubiquitin transferase	1	CESGFIEELPEETR	C(UniMod:4)ESGFIEELPEETR	2	C(UniMod:4)ESGFIEELPEETR2	4026.34	3684.49	3797.33
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	CESGGFICK	C(UniMod:4)ESGGFIC(UniMod:4)K	2	C(UniMod:4)ESGGFIC(UniMod:4)K2	41317.5	44119.2	40099.2
P81827	P81827	UP1_RAT		Urinary protein 1	1	CESLDSTGLCR	C(UniMod:4)ESLDSTGLC(UniMod:4)R	2	C(UniMod:4)ESLDSTGLC(UniMod:4)R2	173635	137368	181600
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	CESLLGLDPATCSR	C(UniMod:4)ESLLGLDPATC(UniMod:4)SR	2	C(UniMod:4)ESLLGLDPATC(UniMod:4)SR2	17971.2	17007.9	15822.8
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	CESPEEGTR	C(UniMod:4)ESPEEGTR	2	C(UniMod:4)ESPEEGTR2			5894.75
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	CESQQELYVAAQGACR	C(UniMod:4)ESQQELYVAAQGAC(UniMod:4)R	2	C(UniMod:4)ESQQELYVAAQGAC(UniMod:4)R2	2331.31	1999.74	6589.46
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	CESQVDECR	C(UniMod:4)ESQVDEC(UniMod:4)R	2	C(UniMod:4)ESQVDEC(UniMod:4)R2			10747.9
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	CESVINGCR	C(UniMod:4)ESVINGC(UniMod:4)R	2	C(UniMod:4)ESVINGC(UniMod:4)R2	14517.5	21179.6	17049.8
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	CETDIDECSSLPCLNGGICR	C(UniMod:4)ETDIDEC(UniMod:4)SSLPC(UniMod:4)LNGGIC(UniMod:4)R	3	C(UniMod:4)ETDIDEC(UniMod:4)SSLPC(UniMod:4)LNGGIC(UniMod:4)R3	35286.2	39944.2	10156.3
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	CETDVNECLSGPCR	C(UniMod:4)ETDVNEC(UniMod:4)LSGPC(UniMod:4)R	2	C(UniMod:4)ETDVNEC(UniMod:4)LSGPC(UniMod:4)R2	1521.27	4390.79	4341.4
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	CETNHFGFGPEGCKPCDCHHEGSLSLQCK	C(UniMod:4)ETNHFGFGPEGC(UniMod:4)KPC(UniMod:4)DC(UniMod:4)HHEGSLSLQC(UniMod:4)K	4	C(UniMod:4)ETNHFGFGPEGC(UniMod:4)KPC(UniMod:4)DC(UniMod:4)HHEGSLSLQC(UniMod:4)K4	12358.9	13845	13023
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	CETPSAAPEVPEEPR	C(UniMod:4)ETPSAAPEVPEEPR	2	C(UniMod:4)ETPSAAPEVPEEPR2	69279.4	66682.3	79707.8
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	CETPSAAPEVPEEPR	C(UniMod:4)ETPSAAPEVPEEPR	3	C(UniMod:4)ETPSAAPEVPEEPR3	10661.7	12515.6	10267.1
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	CETQLSQGS	C(UniMod:4)ETQLSQGS	2	C(UniMod:4)ETQLSQGS2	2821.08	4010.06	4913.75
Q05028	Q05028	PDGFB_RAT	Pdgfb	Platelet-derived growth factor subunit B (Fragment)	1	CETVVTPR	C(UniMod:4)ETVVTPR	2	C(UniMod:4)ETVVTPR2	11963.1	6671.63	8945.57
Q9EQG6	Q9EQG6	KDIS_RAT	Kidins220	Kinase D-interacting substrate of 220 kDa	1	CEVELMAR	C(UniMod:4)EVELMAR	2	C(UniMod:4)EVELMAR2	7615.84	4622.02	2702.25
D3ZT64	D3ZT64	D3ZT64_RAT	Atg2a	Autophagy related 2A	1	CEVENLDLRR	C(UniMod:4)EVENLDLRR	3	C(UniMod:4)EVENLDLRR3		5990.28	5998.95
Q4V8E4	Q4V8E4	CFA36_RAT	Cfap36	Cilia- and flagella-associated protein 36	1	CEVFDDEEESK	C(UniMod:4)EVFDDEEESK	2	C(UniMod:4)EVFDDEEESK2	4509.4	10891.1	3863.9
Q4KLL4	Q4KLL4	TM9S4_RAT	Tm9sf4	Transmembrane 9 superfamily member 4	1	CEVLCGQSNKPVILTVEQSR	C(UniMod:4)EVLC(UniMod:4)GQSNKPVILTVEQSR	3	C(UniMod:4)EVLC(UniMod:4)GQSNKPVILTVEQSR3	75871.4	83828.7	72968.4
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	CEVQFSPR	C(UniMod:4)EVQFSPR	2	C(UniMod:4)EVQFSPR2	123985	116478	115463
B0BN63	B0BN63	B0BN63_RAT	Ahsa1	Activator of Hsp90 ATPase activity 1	1	CEVTEVNK	C(UniMod:4)EVTEVNK	2	C(UniMod:4)EVTEVNK2	13730.2	25431.8	26778.4
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	CEVVAGSLK	C(UniMod:4)EVVAGSLK	2	C(UniMod:4)EVVAGSLK2	8928.78	12679.7	11897.1
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CEWLCLLSPSGPVCTCPNGK	C(UniMod:4)EWLC(UniMod:4)LLSPSGPVC(UniMod:4)TC(UniMod:4)PNGK	3	C(UniMod:4)EWLC(UniMod:4)LLSPSGPVC(UniMod:4)TC(UniMod:4)PNGK3	3085.6	3358.3	8174.71
Q9QWJ9	Q9QWJ9	NRP1_RAT	Nrp1	Neuropilin-1	1	CEWLIQAPEPYQR	C(UniMod:4)EWLIQAPEPYQR	2	C(UniMod:4)EWLIQAPEPYQR2	9751.67	5532.29	11090.9
Q9QWJ9	Q9QWJ9	NRP1_RAT	Nrp1	Neuropilin-1	1	CEWLIQAPEPYQR	C(UniMod:4)EWLIQAPEPYQR	3	C(UniMod:4)EWLIQAPEPYQR3	4643.48	5756.27	5737.19
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	CEYCDSGYR	C(UniMod:4)EYC(UniMod:4)DSGYR	2	C(UniMod:4)EYC(UniMod:4)DSGYR2	317356	288436	298974
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	CEYDFVK	C(UniMod:4)EYDFVK	1	C(UniMod:4)EYDFVK1	1542.15	2175.44	1614.34
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	CEYDFVK	C(UniMod:4)EYDFVK	2	C(UniMod:4)EYDFVK2	144634	162413	156486
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CEYDGSHR	C(UniMod:4)EYDGSHR	2	C(UniMod:4)EYDGSHR2			8265.95
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	CEYPAACNALETLLIHR	C(UniMod:4)EYPAAC(UniMod:4)NALETLLIHR	3	C(UniMod:4)EYPAAC(UniMod:4)NALETLLIHR3	19625.5	23166.8	34185.5
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	CEYSHFMQHHR	C(UniMod:4)EYSHFMQHHR	4	C(UniMod:4)EYSHFMQHHR4	8560.45	11997.7	
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	CEYTDCEK	C(UniMod:4)EYTDC(UniMod:4)EK	2	C(UniMod:4)EYTDC(UniMod:4)EK2	32234.6	29753.4	33775
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	CFAADIISVLAMTMSGER	C(UniMod:4)FAADIISVLAMTMSGER	3	C(UniMod:4)FAADIISVLAMTMSGER3		2283.5	9100.81
D4AAY4	D4AAY4	D4AAY4_RAT	Tbc1d7	TBC1 domain family member 7	1	CFAGCLPESSLQR	C(UniMod:4)FAGC(UniMod:4)LPESSLQR	2	C(UniMod:4)FAGC(UniMod:4)LPESSLQR2	2767.63		3514.94
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	CFAGLLNK	C(UniMod:4)FAGLLNK	2	C(UniMod:4)FAGLLNK2	21773.5	23593	28706.6
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	CFANTVNLSFPSAQSLPASDTHLTVK	C(UniMod:4)FANTVNLSFPSAQSLPASDTHLTVK	3	C(UniMod:4)FANTVNLSFPSAQSLPASDTHLTVK3	729190	672410	564653
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	CFANTVNLSFPSAQSLPASDTHLTVK	C(UniMod:4)FANTVNLSFPSAQSLPASDTHLTVK	4	C(UniMod:4)FANTVNLSFPSAQSLPASDTHLTVK4	38665.3	45966.3	32233.1
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	CFASLADR	C(UniMod:4)FASLADR	2	C(UniMod:4)FASLADR2	23464.4	13139.2	17251
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	CFCMGVSR	C(UniMod:4)FC(UniMod:4)MGVSR	2	C(UniMod:4)FC(UniMod:4)MGVSR2	56786.2	70364.1	54196.6
Q4KLH5	A0A8I6AVV4;Q4KLH5	AGFG1_RAT	Agfg1	Arf-GAP domain and FG repeat-containing protein 1	0	CFDCDQR	C(UniMod:4)FDC(UniMod:4)DQR	2	C(UniMod:4)FDC(UniMod:4)DQR2	7299.38	4660.51	4099.29
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	CFDDTVHGFR	C(UniMod:4)FDDTVHGFR	3	C(UniMod:4)FDDTVHGFR3	7869.01	5247.4	4430.72
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	CFDETRYEYFEVGDHWAR	C(UniMod:4)FDETRYEYFEVGDHWAR	3	C(UniMod:4)FDETRYEYFEVGDHWAR3	21213.9	18143.8	12057
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	CFDETRYEYFEVGDHWAR	C(UniMod:4)FDETRYEYFEVGDHWAR	4	C(UniMod:4)FDETRYEYFEVGDHWAR4	76790.3	68909.2	71547.8
D3ZE05	D3ZE05	D3ZE05_RAT	Cilp2	Cartilage intermediate layer protein 2	1	CFDGSSDGFSR	C(UniMod:4)FDGSSDGFSR	2	C(UniMod:4)FDGSSDGFSR2	17152	13908.8	18325.8
D3ZGB8	D3ZGB8	D3ZGB8_RAT	Cilp	Cartilage intermediate layer protein	1	CFDGTSDGSSR	C(UniMod:4)FDGTSDGSSR	2	C(UniMod:4)FDGTSDGSSR2	20999.2	18228	11292.6
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	CFDHAAGTSYVVGETWEK	C(UniMod:4)FDHAAGTSYVVGETWEK	3	C(UniMod:4)FDHAAGTSYVVGETWEK3	301618	320699	272764
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	CFDLISHDR	C(UniMod:4)FDLISHDR	2	C(UniMod:4)FDLISHDR2	6746.08	4981.58	7568.64
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	CFDLISHDR	C(UniMod:4)FDLISHDR	3	C(UniMod:4)FDLISHDR3	11956.6	10181.7	8825.81
Q498T9	Q3KRC6;Q498T9;D4A758;Q4V8I7	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	0	CFDSPWTTR	C(UniMod:4)FDSPWTTR	2	C(UniMod:4)FDSPWTTR2	19942.2	14921.3	13482.6
A0A0G2JX20	A0A0G2JX20	A0A0G2JX20_RAT	Katnb1	Katanin p80 WD40 repeat-containing subunit B1	1	CFDVVLVNWGK	C(UniMod:4)FDVVLVNWGK	2	C(UniMod:4)FDVVLVNWGK2	7671.16	8596.7	
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	CFEEDFR	C(UniMod:4)FEEDFR	2	C(UniMod:4)FEEDFR2	38067.3	65733.5	29570
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	CFEMSSFVETK	C(UniMod:4)FEMSSFVETK	2	C(UniMod:4)FEMSSFVETK2	37827.9	45301.3	38416.9
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	CFEPHLYVYIESQDK	C(UniMod:4)FEPHLYVYIESQDK	3	C(UniMod:4)FEPHLYVYIESQDK3	5215.66	8264.34	2510.31
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	CFESFAR	C(UniMod:4)FESFAR	2	C(UniMod:4)FESFAR2	1.15104e+06	1.25351e+06	1.14458e+06
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	CFESQLLK	C(UniMod:4)FESQLLK	2	C(UniMod:4)FESQLLK2	102179	101751	115927
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	CFETCPPR	C(UniMod:4)FETC(UniMod:4)PPR	2	C(UniMod:4)FETC(UniMod:4)PPR2	18234.1	19253	16359.3
Q32PX2	Q32PX2	AIMP2_RAT	Aimp2	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2	1	CFGEQAR	C(UniMod:4)FGEQAR	2	C(UniMod:4)FGEQAR2	68808.2	71228	73433.9
B0BNE5	B0BNE5	ESTD_RAT	Esd	S-formylglutathione hydrolase	1	CFGGLQK	C(UniMod:4)FGGLQK	2	C(UniMod:4)FGGLQK2	25415.4	25095.7	26505.2
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	CFGLLLSPGK	C(UniMod:4)FGLLLSPGK	2	C(UniMod:4)FGLLLSPGK2	41761.7	51686.7	48013.6
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	CFGMLLSPGR	C(UniMod:4)FGMLLSPGR	2	C(UniMod:4)FGMLLSPGR2	16434.6	19085.9	13713.1
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	CFGPTAQAALLESSK	C(UniMod:4)FGPTAQAALLESSK	2	C(UniMod:4)FGPTAQAALLESSK2	1061.26	4230.56	
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	CFGPTAQAALLESSKK	C(UniMod:4)FGPTAQAALLESSKK	3	C(UniMod:4)FGPTAQAALLESSKK3	5564.42		5439.46
Q99P99	Q99P99	HDAC4_RAT	Hdac4	Histone deacetylase 4	1	CFGYLTK	C(UniMod:4)FGYLTK	2	C(UniMod:4)FGYLTK2	4076.13	3522.55	2717.95
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	CFHAWSTFR	C(UniMod:4)FHAWSTFR	2	C(UniMod:4)FHAWSTFR2	25561.2	28092.8	6425.61
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	CFHAWSTFR	C(UniMod:4)FHAWSTFR	3	C(UniMod:4)FHAWSTFR3	218851	239889	195209
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	CFICDSR	C(UniMod:4)FIC(UniMod:4)DSR	2	C(UniMod:4)FIC(UniMod:4)DSR2	38144.3		
Q5I0E7	Q5I0E7;G3V6N2	TMED9_RAT	Tmed9	Transmembrane emp24 domain-containing protein 9	0	CFIEEIPDETMVIGNYR	C(UniMod:4)FIEEIPDETMVIGNYR	3	C(UniMod:4)FIEEIPDETMVIGNYR3	32623.3	41874.2	53788.9
Q63663	Q63663	GBP2_RAT	Gbp2	Guanylate-binding protein 2	1	CFIFDRPALR	C(UniMod:4)FIFDRPALR	3	C(UniMod:4)FIFDRPALR3	31028.9	41879.8	34835.5
A0A8I5ZW56	A0A8I5ZW56	A0A8I5ZW56_RAT	Clec16a	C-type lectin domain containing 16A	1	CFIKPTETLER	C(UniMod:4)FIKPTETLER	3	C(UniMod:4)FIKPTETLER3	8529.36	7203.01	5414.89
P19945	P19945	RLA0_RAT	Rplp0	Large ribosomal subunit protein uL10	1	CFIVGADNVGSK	C(UniMod:4)FIVGADNVGSK	2	C(UniMod:4)FIVGADNVGSK2	161187	147387	158040
Q68FW9	Q68FW9	CSN3_RAT	Cops3	COP9 signalosome complex subunit 3	1	CFKPALPYLDVDMMDICK	C(UniMod:4)FKPALPYLDVDMMDIC(UniMod:4)K	3	C(UniMod:4)FKPALPYLDVDMMDIC(UniMod:4)K3	11510.1	12809.6	13286.9
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	CFLCDSR	C(UniMod:4)FLC(UniMod:4)DSR	2	C(UniMod:4)FLC(UniMod:4)DSR2		39169.1	35827.7
A0A0G2JYR4	A0A8I6AP41;A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	0	CFLGSSETADANR	C(UniMod:4)FLGSSETADANR	2	C(UniMod:4)FLGSSETADANR2	2535.55	3620.79	
Q6P6G2	Q6P6G2	CF089_RAT		Bombesin receptor-activated protein C6orf89 homolog	1	CFLIQPEPVVGSK	C(UniMod:4)FLIQPEPVVGSK	2	C(UniMod:4)FLIQPEPVVGSK2	16800.7	15721.6	15820.8
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	CFLLESNSSSVR	C(UniMod:4)FLLESNSSSVR	2	C(UniMod:4)FLLESNSSSVR2	20659.9	29883.2	32066.3
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	CFLSWLVK	C(UniMod:4)FLSWLVK	2	C(UniMod:4)FLSWLVK2	15263.8	20968.8	17074.1
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	CFLTSAFQGTTSSK	C(UniMod:4)FLTSAFQGTTSSK	2	C(UniMod:4)FLTSAFQGTTSSK2	14369	15663.3	19098.5
O35397	O35397	CASP6_RAT	Casp6	Caspase-6	1	CFNDLRAEELLLK	C(UniMod:4)FNDLRAEELLLK	3	C(UniMod:4)FNDLRAEELLLK3	17722.1	24865.2	21153.3
B4F795	B4F795	CTL2_RAT	Slc44a2	Choline transporter-like protein 2	1	CFPAIHASK	C(UniMod:4)FPAIHASK	2	C(UniMod:4)FPAIHASK2	63990.9	62278.4	90972.3
P70645	P70645	BLMH_RAT	Blmh	Bleomycin hydrolase	1	CFPESHTTEATR	C(UniMod:4)FPESHTTEATR	3	C(UniMod:4)FPESHTTEATR3	25415	26343.9	29590.2
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	CFPSDNNCEK	C(UniMod:4)FPSDNNC(UniMod:4)EK	2	C(UniMod:4)FPSDNNC(UniMod:4)EK2	59929	49117.8	57115.1
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	CFQETIGSQCGK	C(UniMod:4)FQETIGSQC(UniMod:4)GK	2	C(UniMod:4)FQETIGSQC(UniMod:4)GK2	276891	276670	283367
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	CFQETIGSQCGK	C(UniMod:4)FQETIGSQC(UniMod:4)GK	3	C(UniMod:4)FQETIGSQC(UniMod:4)GK3	10032	6158.67	4449.06
A0A0G2K0G9	A0A0G2K0G9	A0A0G2K0G9_RAT	Rin3	Ras and Rab interactor 3	1	CFQLADEALPHR	C(UniMod:4)FQLADEALPHR	3	C(UniMod:4)FQLADEALPHR3	9947.19	10011.9	8811.77
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	CFQPPIHQSLASS	C(UniMod:4)FQPPIHQSLASS	2	C(UniMod:4)FQPPIHQSLASS2	90522.6	96204.5	82210.7
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	CFQPPIHQSLATTC	C(UniMod:4)FQPPIHQSLATTC(UniMod:4)	2	C(UniMod:4)FQPPIHQSLATTC(UniMod:4)2	6803.89	2582.93	7729.88
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	CFSEENHEPLR	C(UniMod:4)FSEENHEPLR	2	C(UniMod:4)FSEENHEPLR2	5624.13	2589.84	
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	CFSEENHEPLR	C(UniMod:4)FSEENHEPLR	3	C(UniMod:4)FSEENHEPLR3	80869.6	80936.6	64236
B0BNH1	B0BNH1	B0BNH1_RAT	Gnptg	N-acetylglucosamine-1-phosphate transferase subunit gamma	1	CFSLVESTYK	C(UniMod:4)FSLVESTYK	2	C(UniMod:4)FSLVESTYK2	40977.3	28251.4	19669.8
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	CFSSDFMAYDIACDR	C(UniMod:4)FSSDFMAYDIAC(UniMod:4)DR	2	C(UniMod:4)FSSDFMAYDIAC(UniMod:4)DR2	12533.5	8431.69	11053.9
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	CFSSDFMAYDIACDR	C(UniMod:4)FSSDFMAYDIAC(UniMod:4)DR	3	C(UniMod:4)FSSDFMAYDIAC(UniMod:4)DR3	4832.69	2853.36	6953.67
Q9ES53	Q9ES53	UFD1_RAT	Ufd1	Ubiquitin recognition factor in ER-associated degradation protein 1	1	CFSVSMLAGPNDR	C(UniMod:4)FSVSMLAGPNDR	2	C(UniMod:4)FSVSMLAGPNDR2	6580.57	10893	4271.07
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	CFSVTVR	C(UniMod:4)FSVTVR	2	C(UniMod:4)FSVTVR2	52828.6	39958.2	41954.3
A0A8I5YC01	A0A8I5YC01	A0A8I5YC01_RAT	Gimap1	GTPase, IMAP family member 1	1	CFVLSAPGPHALLLVTQLGR	C(UniMod:4)FVLSAPGPHALLLVTQLGR	3	C(UniMod:4)FVLSAPGPHALLLVTQLGR3	24338	21938.5	18653.2
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	CGAALADEDHSLHPPLQR	C(UniMod:4)GAALADEDHSLHPPLQR	4	C(UniMod:4)GAALADEDHSLHPPLQR4	8483.66	4540.52	3079.31
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	CGACPPGYSGNGIQCK	C(UniMod:4)GAC(UniMod:4)PPGYSGNGIQC(UniMod:4)K	2	C(UniMod:4)GAC(UniMod:4)PPGYSGNGIQC(UniMod:4)K2	7.4428e+06	7.07965e+06	7.98814e+06
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	CGACPPGYSGNGIQCK	C(UniMod:4)GAC(UniMod:4)PPGYSGNGIQC(UniMod:4)K	3	C(UniMod:4)GAC(UniMod:4)PPGYSGNGIQC(UniMod:4)K3	249506	258748	293866
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	CGAFMSK	C(UniMod:4)GAFMSK	2	C(UniMod:4)GAFMSK2	23085.7	18319.2	31673
G3V6R4	G3V6R4	G3V6R4_RAT	Lrrc1	Leucine rich repeat containing 1	1	CGAMESLVNDVSEEAWDDHSVHR	C(UniMod:4)GAMESLVNDVSEEAWDDHSVHR	4	C(UniMod:4)GAMESLVNDVSEEAWDDHSVHR4	4161.95	3018.4	2631.56
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	CGASGQWTAVTPVCR	C(UniMod:4)GASGQWTAVTPVC(UniMod:4)R	2	C(UniMod:4)GASGQWTAVTPVC(UniMod:4)R2	311821	270474	321971
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	CGASGQWTAVTPVCR	C(UniMod:4)GASGQWTAVTPVC(UniMod:4)R	3	C(UniMod:4)GASGQWTAVTPVC(UniMod:4)R3	46551.3	42513.7	33743.4
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	CGCPAGFELAPNGVSCTR	C(UniMod:4)GC(UniMod:4)PAGFELAPNGVSC(UniMod:4)TR	2	C(UniMod:4)GC(UniMod:4)PAGFELAPNGVSC(UniMod:4)TR2	206140	183075	188257
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	CGCPAGFELAPNGVSCTR	C(UniMod:4)GC(UniMod:4)PAGFELAPNGVSC(UniMod:4)TR	3	C(UniMod:4)GC(UniMod:4)PAGFELAPNGVSC(UniMod:4)TR3	112733	121531	112907
M0R4M1	M0R4M1	M0R4M1_RAT	Nlrc5	NLR family, CARD domain containing 5	1	CGDAFAEALCR	C(UniMod:4)GDAFAEALC(UniMod:4)R	2	C(UniMod:4)GDAFAEALC(UniMod:4)R2	5471.76	3473.36	
O08561	O08561	PI4KB_RAT	Pi4kb	Phosphatidylinositol 4-kinase beta	1	CGDDLRQELLAFQVLK	C(UniMod:4)GDDLRQELLAFQVLK	3	C(UniMod:4)GDDLRQELLAFQVLK3	8244.63	554.495	2659.17
A0A8I5ZMX2	A0A8I5ZMX2	A0A8I5ZMX2_RAT	Adamts3	ADAM metallopeptidase with thrombospondin type 1, motif 3	1	CGDETAMGSVMAPLVQAAFHR	C(UniMod:4)GDETAMGSVMAPLVQAAFHR	3	C(UniMod:4)GDETAMGSVMAPLVQAAFHR3		1898	2212.34
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	CGDLECETLITR	C(UniMod:4)GDLEC(UniMod:4)ETLITR	2	C(UniMod:4)GDLEC(UniMod:4)ETLITR2	4829.06	8123.05	9428.58
P58775	P58775	TPM2_RAT	Tpm2	Tropomyosin beta chain	1	CGDLEEELK	C(UniMod:4)GDLEEELK	2	C(UniMod:4)GDLEEELK2	8272.82	3537.22	8692.45
Q8VHK7	Q8VHK7	HDGF_RAT	Hdgf	Hepatoma-derived growth factor	1	CGDLVFAK	C(UniMod:4)GDLVFAK	2	C(UniMod:4)GDLVFAK2	7456.45	6252.37	2050.44
D4A3E2	D4A3E2	D4A3E2_RAT	Npepl1	Aminopeptidase-like 1	1	CGDLVHPLVYCPELHFSEFTSAVADMK	C(UniMod:4)GDLVHPLVYC(UniMod:4)PELHFSEFTSAVADMK	4	C(UniMod:4)GDLVHPLVYC(UniMod:4)PELHFSEFTSAVADMK4		5174.65	1224.2
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	CGEAALNDPK	C(UniMod:4)GEAALNDPK	2	C(UniMod:4)GEAALNDPK2	51888.2	52323	51419.6
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	CGEDEDTVPAEYR	C(UniMod:4)GEDEDTVPAEYR	2	C(UniMod:4)GEDEDTVPAEYR2	47773	50833	41174
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	CGEGQLCYNLPGSYR	C(UniMod:4)GEGQLC(UniMod:4)YNLPGSYR	2	C(UniMod:4)GEGQLC(UniMod:4)YNLPGSYR2	260702	301933	273290
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	CGEGQLCYNLPGSYR	C(UniMod:4)GEGQLC(UniMod:4)YNLPGSYR	3	C(UniMod:4)GEGQLC(UniMod:4)YNLPGSYR3	59932	68702	74639.9
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	CGEGYSR	C(UniMod:4)GEGYSR	2	C(UniMod:4)GEGYSR2			11945
Q9JM04	Q9JM04	IPO13_RAT	Ipo13	Importin-13	1	CGEIESVGK	C(UniMod:4)GEIESVGK	2	C(UniMod:4)GEIESVGK2	4909.54	6363.34	
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	CGEMAQAASAAVTR	C(UniMod:4)GEMAQAASAAVTR	2	C(UniMod:4)GEMAQAASAAVTR2	17071.4	19591	22099.7
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	CGEMAQAASAAVTR	C(UniMod:4)GEMAQAASAAVTR	3	C(UniMod:4)GEMAQAASAAVTR3	1420.61	2077.73	
Q3ZAU4	Q3ZAU4	Q3ZAU4_RAT	Kazald1	Kazal-type serine peptidase inhibitor domain 1	1	CGEQLECR	C(UniMod:4)GEQLEC(UniMod:4)R	2	C(UniMod:4)GEQLEC(UniMod:4)R2	26409.5	23711.9	17622.7
A0A8I6GBD2	A0A8I6GBD2	A0A8I6GBD2_RAT	Actr10	Actin related protein 10	1	CGFAGETGPR	C(UniMod:4)GFAGETGPR	2	C(UniMod:4)GFAGETGPR2	50301.8	36141.7	52232.6
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	CGFCNQPIR	C(UniMod:4)GFC(UniMod:4)NQPIR	2	C(UniMod:4)GFC(UniMod:4)NQPIR2	201611	210902	218293
Q63798	Q63798	PSME2_RAT	Psme2	Proteasome activator complex subunit 2	1	CGFLPGNEK	C(UniMod:4)GFLPGNEK	2	C(UniMod:4)GFLPGNEK2	99217.9	83629.7	83589.3
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	CGFSELYSWQR	C(UniMod:4)GFSELYSWQR	2	C(UniMod:4)GFSELYSWQR2	3525.44	11384.8	4942.18
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	CGFSSALGALPCFLLR	C(UniMod:4)GFSSALGALPC(UniMod:4)FLLR	2	C(UniMod:4)GFSSALGALPC(UniMod:4)FLLR2	17723.9	14603.3	15336.1
B1WBV4	B1WBV4	B1WBV4_RAT	Plekhf2	Pleckstrin homology and FYVE domain containing 2	1	CGFVVCGPCSEK	C(UniMod:4)GFVVC(UniMod:4)GPC(UniMod:4)SEK	2	C(UniMod:4)GFVVC(UniMod:4)GPC(UniMod:4)SEK2	51874.7	48298.8	46792.3
B1WBV4	B1WBV4	B1WBV4_RAT	Plekhf2	Pleckstrin homology and FYVE domain containing 2	1	CGFVVCGPCSEKR	C(UniMod:4)GFVVC(UniMod:4)GPC(UniMod:4)SEKR	3	C(UniMod:4)GFVVC(UniMod:4)GPC(UniMod:4)SEKR3	61018.1	68078.9	42829.2
B1WC42	B1WC42	B1WC42_RAT	Trip6	Thyroid hormone receptor interactor 6	1	CGGCGDDVVGDGAGVVALDR	C(UniMod:4)GGC(UniMod:4)GDDVVGDGAGVVALDR	2	C(UniMod:4)GGC(UniMod:4)GDDVVGDGAGVVALDR2	1474.07	1016.46	1690.35
P47967	P47967;P97840	LEG5_RAT	Lgals5	Galectin-5	0	CGGDIAFHLNPR	C(UniMod:4)GGDIAFHLNPR	3	C(UniMod:4)GGDIAFHLNPR3	3427.42	6825.14	
B0BNN4	B0BNN4	B0BNN4_RAT	Cfp	Complement factor properdin	1	CGGHCPGEAQQSQACDTQK	C(UniMod:4)GGHC(UniMod:4)PGEAQQSQAC(UniMod:4)DTQK	3	C(UniMod:4)GGHC(UniMod:4)PGEAQQSQAC(UniMod:4)DTQK3			2438.57
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	CGGIQYLQSAIESR	C(UniMod:4)GGIQYLQSAIESR	2	C(UniMod:4)GGIQYLQSAIESR2	12076.9	8063.83	5411.11
A0A8I5ZTW6	A0A8I5ZTW6	A0A8I5ZTW6_RAT	Gopc	Golgi associated PDZ and coiled-coil motif containing	1	CGGLHVGDAVLAVNGVNLR	C(UniMod:4)GGLHVGDAVLAVNGVNLR	3	C(UniMod:4)GGLHVGDAVLAVNGVNLR3	7215.03	7182.03	6664.33
D3ZE05	D3ZE05	D3ZE05_RAT	Cilp2	Cartilage intermediate layer protein 2	1	CGGMLFDQR	C(UniMod:4)GGMLFDQR	2	C(UniMod:4)GGMLFDQR2	9311.1	13753.3	8987
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	CGGPGCGGLVTVAHSAWQK	C(UniMod:4)GGPGC(UniMod:4)GGLVTVAHSAWQK	3	C(UniMod:4)GGPGC(UniMod:4)GGLVTVAHSAWQK3	28844.8	29785.5	31099.6
A0A8I6AFV5	A0A8I6AFV5	A0A8I6AFV5_RAT	ENSRNOG00000066958	Uncharacterized protein	1	CGGSSEFFCR	C(UniMod:4)GGSSEFFC(UniMod:4)R	2	C(UniMod:4)GGSSEFFC(UniMod:4)R2	1987.99	411.25	2023.98
A0A0G2KAF4	A0A0G2KAF4	A0A0G2KAF4_RAT	Nfxl1	Nuclear transcription factor, X-box binding-like 1	1	CGHLCPISCHDQALVK	C(UniMod:4)GHLC(UniMod:4)PISC(UniMod:4)HDQALVK	4	C(UniMod:4)GHLC(UniMod:4)PISC(UniMod:4)HDQALVK4	6697.61	8807.55	5102.83
P14740	P14740	DPP4_RAT	Dpp4	Dipeptidyl peptidase 4	1	CGIAVAPVSR	C(UniMod:4)GIAVAPVSR	2	C(UniMod:4)GIAVAPVSR2		9511.89	9653.78
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	CGIEMLSLHDAENLGK	C(UniMod:4)GIEMLSLHDAENLGK	2	C(UniMod:4)GIEMLSLHDAENLGK2	3881.76		
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	CGIEMLSLHDAENLGK	C(UniMod:4)GIEMLSLHDAENLGK	3	C(UniMod:4)GIEMLSLHDAENLGK3	29624.4	31645.6	17520
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	CGIEMLSLHDAENLGKENFK	C(UniMod:4)GIEMLSLHDAENLGKENFK	3	C(UniMod:4)GIEMLSLHDAENLGKENFK3	4846.5	1621.68	6589.08
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	CGIEMLSLHDAENLGKENFK	C(UniMod:4)GIEMLSLHDAENLGKENFK	4	C(UniMod:4)GIEMLSLHDAENLGKENFK4	10562.4	8805.61	6105.72
P11506	P11506	AT2B2_RAT	Atp2b2	Plasma membrane calcium-transporting ATPase 2	1	CGIIHPGEDFLCLEGK	C(UniMod:4)GIIHPGEDFLC(UniMod:4)LEGK	3	C(UniMod:4)GIIHPGEDFLC(UniMod:4)LEGK3	10677.8		6457.73
P11505	P11505	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	1	CGILHPGEDFLCLEGK	C(UniMod:4)GILHPGEDFLC(UniMod:4)LEGK	3	C(UniMod:4)GILHPGEDFLC(UniMod:4)LEGK3		8801.32	
P58751	P58751	RELN_RAT	Reln	Reelin	1	CGILSSGNNLFFNEDGLR	C(UniMod:4)GILSSGNNLFFNEDGLR	3	C(UniMod:4)GILSSGNNLFFNEDGLR3	35672.9	28071.7	47549.2
Q64542	Q64542	AT2B4_RAT	Atp2b4	Plasma membrane calcium-transporting ATPase 4	1	CGILTPGDDFLCLEGK	C(UniMod:4)GILTPGDDFLC(UniMod:4)LEGK	2	C(UniMod:4)GILTPGDDFLC(UniMod:4)LEGK2	9403.51	8852.87	12843
A0A8I6AWS0	A0A8I6AWS0	A0A8I6AWS0_RAT	Npc2	NPC intracellular cholesterol transporter 2	1	CGINCPIQK	C(UniMod:4)GINC(UniMod:4)PIQK	2	C(UniMod:4)GINC(UniMod:4)PIQK2	41663.3	31249	34477.8
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	CGLDNTK	C(UniMod:4)GLDNTK	2	C(UniMod:4)GLDNTK2	28925.4	37193.1	37491.1
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	CGLEDPFNQK	C(UniMod:4)GLEDPFNQK	2	C(UniMod:4)GLEDPFNQK2	32355.4	30656.8	39687.8
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	CGLGTTNR	C(UniMod:4)GLGTTNR	2	C(UniMod:4)GLGTTNR2		282591	
P35433	P35433	PUR1_RAT	Ppat	Amidophosphoribosyltransferase	1	CGLPYVEVLCK	C(UniMod:4)GLPYVEVLC(UniMod:4)K	2	C(UniMod:4)GLPYVEVLC(UniMod:4)K2	8868.42	5960.34	
Q4QQV2	Q4QQV2	DOK1_RAT	Dok1	Docking protein 1	1	CGLQGSYVLR	C(UniMod:4)GLQGSYVLR	2	C(UniMod:4)GLQGSYVLR2	19190.8	18771.7	21566.7
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	CGLVMLSNLVEAFTEAATGSSAVFLR	C(UniMod:4)GLVMLSNLVEAFTEAATGSSAVFLR	3	C(UniMod:4)GLVMLSNLVEAFTEAATGSSAVFLR3		979.543	
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	CGMPPDISNGK	C(UniMod:4)GMPPDISNGK	2	C(UniMod:4)GMPPDISNGK2	1.28818e+06	1.57442e+06	1.23451e+06
Q64620	Q64620	PPP6_RAT	Ppp6c	Serine/threonine-protein phosphatase 6 catalytic subunit	1	CGNIASIMVFK	C(UniMod:4)GNIASIMVFK	2	C(UniMod:4)GNIASIMVFK2	44285.6	48082.7	46816.4
P62716	A0A0G2JYA4;P63331;P62716	PP2AB_RAT	Ppp2cb	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	0	CGNQAAIMELDDTLK	C(UniMod:4)GNQAAIMELDDTLK	2	C(UniMod:4)GNQAAIMELDDTLK2	67191.2	42738.3	57736.8
P62716	A0A0G2JYA4;P63331;P62716	PP2AB_RAT	Ppp2cb	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	0	CGNQAAIMELDDTLK	C(UniMod:4)GNQAAIMELDDTLK	3	C(UniMod:4)GNQAAIMELDDTLK3	5367.78	5510.38	4894.8
P08650	P08650	CO5_RAT	C5	Complement C5	1	CGNQLQVHLSPDK	C(UniMod:4)GNQLQVHLSPDK	3	C(UniMod:4)GNQLQVHLSPDK3	15918.6	18209	
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	CGNTVPDDDNQVVSLSPGSR	C(UniMod:4)GNTVPDDDNQVVSLSPGSR	3	C(UniMod:4)GNTVPDDDNQVVSLSPGSR3	6640.97	9589.59	13763.6
Q5BJ92	Q5BJ92	PP4C_RAT	Ppp4c	Serine/threonine-protein phosphatase 4 catalytic subunit	1	CGNVAAILELDEHLQK	C(UniMod:4)GNVAAILELDEHLQK	3	C(UniMod:4)GNVAAILELDEHLQK3	6667.07	4079.68	6465.62
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	CGPASVQAVK	C(UniMod:4)GPASVQAVK	2	C(UniMod:4)GPASVQAVK2	947275	864525	958777
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	CGPCFNNGVPILEGTSCSCQCSMGR	C(UniMod:4)GPC(UniMod:4)FNNGVPILEGTSC(UniMod:4)SC(UniMod:4)QC(UniMod:4)SMGR	3	C(UniMod:4)GPC(UniMod:4)FNNGVPILEGTSC(UniMod:4)SC(UniMod:4)QC(UniMod:4)SMGR3	14707.3	15789	15973.7
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	CGPCKPGYTGDQTR	C(UniMod:4)GPC(UniMod:4)KPGYTGDQTR	2	C(UniMod:4)GPC(UniMod:4)KPGYTGDQTR2		305591	
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	CGPCKPGYTGDQTR	C(UniMod:4)GPC(UniMod:4)KPGYTGDQTR	3	C(UniMod:4)GPC(UniMod:4)KPGYTGDQTR3	2.45839e+06	2.81076e+06	3.12936e+06
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	CGPCPPGLR	C(UniMod:4)GPC(UniMod:4)PPGLR	2	C(UniMod:4)GPC(UniMod:4)PPGLR2	70907.6	59491.5	44546.4
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	CGPCPPGYTGNGSHCTDVNECNAHPCFPR	C(UniMod:4)GPC(UniMod:4)PPGYTGNGSHC(UniMod:4)TDVNEC(UniMod:4)NAHPC(UniMod:4)FPR	4	C(UniMod:4)GPC(UniMod:4)PPGYTGNGSHC(UniMod:4)TDVNEC(UniMod:4)NAHPC(UniMod:4)FPR4	15601.5	12963.7	8744.32
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	CGPLPPVPMGGAPPPPTPR	C(UniMod:4)GPLPPVPMGGAPPPPTPR	2	C(UniMod:4)GPLPPVPMGGAPPPPTPR2	131391	123883	128516
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	CGPLPPVPMGGAPPPPTPR	C(UniMod:4)GPLPPVPMGGAPPPPTPR	3	C(UniMod:4)GPLPPVPMGGAPPPPTPR3	22119.4	50763	41971
P21913	P21913	SDHB_RAT	Sdhb	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial	1	CGPMVLDALIK	C(UniMod:4)GPMVLDALIK	2	C(UniMod:4)GPMVLDALIK2	30325.8	21206.3	24987
D3ZXJ5	D3ZXJ5	D3ZXJ5_RAT	Efl1	Elongation factor like GTPase 1	1	CGPNILVSR	C(UniMod:4)GPNILVSR	2	C(UniMod:4)GPNILVSR2		2553.53	
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	CGPNSVCVNLVGSYR	C(UniMod:4)GPNSVC(UniMod:4)VNLVGSYR	2	C(UniMod:4)GPNSVC(UniMod:4)VNLVGSYR2	5560.58		
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	CGPTSAVCMCDLK	C(UniMod:4)GPTSAVC(UniMod:4)MC(UniMod:4)DLK	2	C(UniMod:4)GPTSAVC(UniMod:4)MC(UniMod:4)DLK2	15945.3	20194.5	20445.2
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	CGQEEHDVLLSTEEDRK	C(UniMod:4)GQEEHDVLLSTEEDRK	3	C(UniMod:4)GQEEHDVLLSTEEDRK3	2740.19	2155.75	7875.6
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	CGQEEHDVLLSTEEDRK	C(UniMod:4)GQEEHDVLLSTEEDRK	4	C(UniMod:4)GQEEHDVLLSTEEDRK4	11481.5	14534.2	13229.2
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	CGQLGVGNYK	C(UniMod:4)GQLGVGNYK	2	C(UniMod:4)GQLGVGNYK2	13671.4	25189.1	12594.6
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	CGQPEVSWWGWR	C(UniMod:4)GQPEVSWWGWR	2	C(UniMod:4)GQPEVSWWGWR2	12941.4	10840	13549.2
A0A8I5Y1D5	A0A8I5Y1D5	A0A8I5Y1D5_RAT	Mtmr1	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	CGQPLVGPNDK	C(UniMod:4)GQPLVGPNDK	2	C(UniMod:4)GQPLVGPNDK2	7594.04	7374.86	6078.36
D3ZXJ5	D3ZXJ5	D3ZXJ5_RAT	Efl1	Elongation factor like GTPase 1	1	CGSEDTAPVIIFVSK	C(UniMod:4)GSEDTAPVIIFVSK	2	C(UniMod:4)GSEDTAPVIIFVSK2	4913.46	5928.05	7488.95
Q6IE70	Q6IE70	PAN2_RAT	Pan2	PAN2-PAN3 deadenylation complex catalytic subunit Pan2	1	CGSETVR	C(UniMod:4)GSETVR	2	C(UniMod:4)GSETVR2			10534.8
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	CGSPTPMEIDKR	C(UniMod:4)GSPTPMEIDKR	2	C(UniMod:4)GSPTPMEIDKR2	2458.85		1290
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	CGTGIVGVFVK	C(UniMod:4)GTGIVGVFVK	2	C(UniMod:4)GTGIVGVFVK2	305467	328569	291365
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	CGTHTGQFECICEK	C(UniMod:4)GTHTGQFEC(UniMod:4)IC(UniMod:4)EK	2	C(UniMod:4)GTHTGQFEC(UniMod:4)IC(UniMod:4)EK2	1994.58	2054.17	
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	CGTHTGQFECICEK	C(UniMod:4)GTHTGQFEC(UniMod:4)IC(UniMod:4)EK	3	C(UniMod:4)GTHTGQFEC(UniMod:4)IC(UniMod:4)EK3	20548.5	73888.9	97838.7
Q8CHI9	Q8CHI9	CHSTF_RAT	Chst15	Carbohydrate sulfotransferase 15	1	CGTTDLYDR	C(UniMod:4)GTTDLYDR	2	C(UniMod:4)GTTDLYDR2	8946.38	8405.26	5761.08
Q80Z30	Q80Z30	PPM1E_RAT	Ppm1e	Protein phosphatase 1E	1	CGTTGVVTFIR	C(UniMod:4)GTTGVVTFIR	2	C(UniMod:4)GTTGVVTFIR2	41667	57523.8	49503
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	CGTYGIYTK	C(UniMod:4)GTYGIYTK	2	C(UniMod:4)GTYGIYTK2	4.91966e+06	5.88635e+06	5.71503e+06
Q5PPM8	Q5PPM8	PP4P1_RAT	Pip4p1	Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase	1	CGVCNEATPIK	C(UniMod:4)GVC(UniMod:4)NEATPIK	2	C(UniMod:4)GVC(UniMod:4)NEATPIK2	7044.99	5414.12	9426.85
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	CGVCQGDGSSCTHVTGNYR	C(UniMod:4)GVC(UniMod:4)QGDGSSC(UniMod:4)THVTGNYR	3	C(UniMod:4)GVC(UniMod:4)QGDGSSC(UniMod:4)THVTGNYR3	264445	302445	285785
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	CGVCQGDGSSCTHVTGNYRK	C(UniMod:4)GVC(UniMod:4)QGDGSSC(UniMod:4)THVTGNYRK	4	C(UniMod:4)GVC(UniMod:4)QGDGSSC(UniMod:4)THVTGNYRK4		3181.98	4022.06
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	CGVEIIGLK	C(UniMod:4)GVEIIGLK	2	C(UniMod:4)GVEIIGLK2	12328.7	11228.9	17273.3
Q9EPH1	Q9EPH1	A1BG_RAT	A1bg	Alpha-1B-glycoprotein	1	CGVEPPVDIQLPALSK	C(UniMod:4)GVEPPVDIQLPALSK	2	C(UniMod:4)GVEPPVDIQLPALSK2		1173.76	2201.79
D3Z952	D3Z952	D3Z952_RAT	Mfap2	Microfibril associated protein 2	1	CGVIANSGLCQSVAASCAR	C(UniMod:4)GVIANSGLC(UniMod:4)QSVAASC(UniMod:4)AR	3	C(UniMod:4)GVIANSGLC(UniMod:4)QSVAASC(UniMod:4)AR3	8020.79	9512.14	18318.6
P62246	D3ZLL8;A0A0G2K6I0;A0A0G2K2F6;P62246;D3ZZC7	RS15A_RAT	Rps15a	Small ribosomal subunit protein uS8	0	CGVISPR	C(UniMod:4)GVISPR	2	C(UniMod:4)GVISPR2	33960.7	52505.1	26508
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	CGVITAYTNR	C(UniMod:4)GVITAYTNR	2	C(UniMod:4)GVITAYTNR2	9804.78	10543.9	18089.1
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	CGVLFVTK	C(UniMod:4)GVLFVTK	2	C(UniMod:4)GVLFVTK2	8270.16	7611.63	7452.79
Q5XIE1	Q5XIE1	THEM6_RAT	Them6	Protein THEM6	1	CGVLGALR	C(UniMod:4)GVLGALR	2	C(UniMod:4)GVLGALR2	55910.9	53749.8	71368.6
P50282	P50282	MMP9_RAT	Mmp9	Matrix metalloproteinase-9	1	CGVPDVGK	C(UniMod:4)GVPDVGK	2	C(UniMod:4)GVPDVGK2	28534.8	22905.6	18037.3
D4A0Z1	D4A0Z1	D4A0Z1_RAT	Tspan14	Tetraspanin	1	CGVPFSCCVPDPAQK	C(UniMod:4)GVPFSC(UniMod:4)C(UniMod:4)VPDPAQK	2	C(UniMod:4)GVPFSC(UniMod:4)C(UniMod:4)VPDPAQK2	39648.5	58891.4	54610.6
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	CGVPFTDLLDAAK	C(UniMod:4)GVPFTDLLDAAK	2	C(UniMod:4)GVPFTDLLDAAK2	178331	216195	180543
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	CGVSELEK	C(UniMod:4)GVSELEK	2	C(UniMod:4)GVSELEK2	12255.9	19562.3	24860.9
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	CGWPTTITVQTK	C(UniMod:4)GWPTTITVQTK	2	C(UniMod:4)GWPTTITVQTK2	23582.4	20222.4	16343.7
Q5M7U6	Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	1	CGYAGSNFPEHIFPALVGR	C(UniMod:4)GYAGSNFPEHIFPALVGR	3	C(UniMod:4)GYAGSNFPEHIFPALVGR3	287450	268202	261712
Q5M7U6	Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	1	CGYAGSNFPEHIFPALVGRPIIR	C(UniMod:4)GYAGSNFPEHIFPALVGRPIIR	3	C(UniMod:4)GYAGSNFPEHIFPALVGRPIIR3	25782.8	23242.7	10212.6
Q5M7U6	Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	1	CGYAGSNFPEHIFPALVGRPIIR	C(UniMod:4)GYAGSNFPEHIFPALVGRPIIR	4	C(UniMod:4)GYAGSNFPEHIFPALVGRPIIR4	241858	226144	260122
Q52KJ8	Q52KJ8	MSRB1_RAT	Msrb1	Methionine-R-sulfoxide reductase B1	1	CGYELFSSR	C(UniMod:4)GYELFSSR	2	C(UniMod:4)GYELFSSR2	9189.04	4213.03	5026.42
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	CHAGHLNGVYYQGGTYSK	C(UniMod:4)HAGHLNGVYYQGGTYSK	3	C(UniMod:4)HAGHLNGVYYQGGTYSK3	82272.3	73359.1	58074.3
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	CHAGHLNGVYYQGGTYSK	C(UniMod:4)HAGHLNGVYYQGGTYSK	4	C(UniMod:4)HAGHLNGVYYQGGTYSK4	18055.2	5.90576e+06	5.95911e+06
A0A8I6A6W3	A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	1	CHAIIDEQPLIFK	C(UniMod:4)HAIIDEQPLIFK	2	C(UniMod:4)HAIIDEQPLIFK2	35089.1	22564	23303.9
A0A8I6A6W3	A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	1	CHAIIDEQPLIFK	C(UniMod:4)HAIIDEQPLIFK	3	C(UniMod:4)HAIIDEQPLIFK3	433989	380782	359849
B0BN94	B0BN94	F136A_RAT	Fam136a	Protein FAM136A	1	CHAPLAQAQALVTSELER	C(UniMod:4)HAPLAQAQALVTSELER	3	C(UniMod:4)HAPLAQAQALVTSELER3	4712.43	6452.73	4129.22
D3Z8F6	D3Z8F6	D3Z8F6_RAT	Dennd1b	DENN domain containing 1B	1	CHASENEDPVVLWK	C(UniMod:4)HASENEDPVVLWK	3	C(UniMod:4)HASENEDPVVLWK3	7178.82	9497.7	8042.83
D3ZJF8	D3ZJF8;F7EZQ4	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	0	CHCGPGGDSLICK	C(UniMod:4)HC(UniMod:4)GPGGDSLIC(UniMod:4)K	2	C(UniMod:4)HC(UniMod:4)GPGGDSLIC(UniMod:4)K2	94215	95043.7	72508
D3ZJF8	D3ZJF8;F7EZQ4	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	0	CHCGPGGDSLICK	C(UniMod:4)HC(UniMod:4)GPGGDSLIC(UniMod:4)K	3	C(UniMod:4)HC(UniMod:4)GPGGDSLIC(UniMod:4)K3	608794	666929	751409
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	CHCLSSWTGHDCSR	C(UniMod:4)HC(UniMod:4)LSSWTGHDC(UniMod:4)SR	2	C(UniMod:4)HC(UniMod:4)LSSWTGHDC(UniMod:4)SR2	1869.34		1252.85
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	CHCLSSWTGHDCSR	C(UniMod:4)HC(UniMod:4)LSSWTGHDC(UniMod:4)SR	3	C(UniMod:4)HC(UniMod:4)LSSWTGHDC(UniMod:4)SR3	4164.27	9078.35	4564.23
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	CHCLSSWTGHDCSR	C(UniMod:4)HC(UniMod:4)LSSWTGHDC(UniMod:4)SR	4	C(UniMod:4)HC(UniMod:4)LSSWTGHDC(UniMod:4)SR4	31078.3	37164.8	41540.8
D3ZCD0	D3ZCD0	D3ZCD0_RAT	Tek	receptor protein-tyrosine kinase	1	CHCTNEEMCDR	C(UniMod:4)HC(UniMod:4)TNEEMC(UniMod:4)DR	2	C(UniMod:4)HC(UniMod:4)TNEEMC(UniMod:4)DR2			1385.41
P35000	P35000	VIPR2_RAT	Vipr2	Vasoactive intestinal polypeptide receptor 2	1	CHDQPGSWVGCK	C(UniMod:4)HDQPGSWVGC(UniMod:4)K	3	C(UniMod:4)HDQPGSWVGC(UniMod:4)K3	5119.39	4270.23	
Q5PQN6	Q5PQN6	SPE39_RAT	Vipas39	Spermatogenesis-defective protein 39 homolog	1	CHDVVIDTCR	C(UniMod:4)HDVVIDTC(UniMod:4)R	3	C(UniMod:4)HDVVIDTC(UniMod:4)R3	9975.03	12042.9	5148.45
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	CHEDIGPFTDTR	C(UniMod:4)HEDIGPFTDTR	3	C(UniMod:4)HEDIGPFTDTR3	5352.06	5085.35	6015.04
Q64350	Q64350	EI2BE_RAT	Eif2b5	Translation initiation factor eIF-2B subunit epsilon	1	CHEDNVVLAVDSTTNR	C(UniMod:4)HEDNVVLAVDSTTNR	3	C(UniMod:4)HEDNVVLAVDSTTNR3	7255.09		17732.1
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	CHEEGLMPSK	C(UniMod:4)HEEGLMPSK	3	C(UniMod:4)HEEGLMPSK3	8493.02	7316.27	5789.18
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	CHEFTATFFPQPTFCSVCHEFVWGLNK	C(UniMod:4)HEFTATFFPQPTFC(UniMod:4)SVC(UniMod:4)HEFVWGLNK	4	C(UniMod:4)HEFTATFFPQPTFC(UniMod:4)SVC(UniMod:4)HEFVWGLNK4	23252.5	34818.7	29431.5
P05696	P68403;P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	0	CHEFVTFSCPGADK	C(UniMod:4)HEFVTFSC(UniMod:4)PGADK	3	C(UniMod:4)HEFVTFSC(UniMod:4)PGADK3	7578.98	8798.47	16198.9
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	CHEFVTFSCPGADKGPDTDDPR	C(UniMod:4)HEFVTFSC(UniMod:4)PGADKGPDTDDPR	3	C(UniMod:4)HEFVTFSC(UniMod:4)PGADKGPDTDDPR3	27542.6	27872.8	30319.5
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	CHEFVTFSCPGADKGPDTDDPR	C(UniMod:4)HEFVTFSC(UniMod:4)PGADKGPDTDDPR	4	C(UniMod:4)HEFVTFSC(UniMod:4)PGADKGPDTDDPR4	120874	115532	136295
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	CHEHYTTEFLYNLYSSEGR	C(UniMod:4)HEHYTTEFLYNLYSSEGR	3	C(UniMod:4)HEHYTTEFLYNLYSSEGR3	4889.16	2641.44	6399
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	CHEHYTTEFLYNLYSSEGR	C(UniMod:4)HEHYTTEFLYNLYSSEGR	4	C(UniMod:4)HEHYTTEFLYNLYSSEGR4	6589.81		
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	CHELDMQVAALQEEK	C(UniMod:4)HELDMQVAALQEEK	3	C(UniMod:4)HELDMQVAALQEEK3	7727.58	5228.05	8798.04
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	CHELSPK	C(UniMod:4)HELSPK	2	C(UniMod:4)HELSPK2			12461.2
A0A8I5ZNG4	A0A8I5ZNG4	A0A8I5ZNG4_RAT	Rictor	RPTOR independent companion of MTOR, complex 2	1	CHETGLLTIK	C(UniMod:4)HETGLLTIK	3	C(UniMod:4)HETGLLTIK3		10884	9564.02
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	CHEVIGSSLLFIHDK	C(UniMod:4)HEVIGSSLLFIHDK	3	C(UniMod:4)HEVIGSSLLFIHDK3	13065.2	7902.88	7078.68
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	CHEVIGSSLLFIHDK	C(UniMod:4)HEVIGSSLLFIHDK	4	C(UniMod:4)HEVIGSSLLFIHDK4	28586.3	19100.8	21973.1
B5DFE0	B5DFE0	B5DFE0_RAT	Pals2	Membrane palmitoylated protein 6	1	CHFDYNPFNDNLIPCK	C(UniMod:4)HFDYNPFNDNLIPC(UniMod:4)K	3	C(UniMod:4)HFDYNPFNDNLIPC(UniMod:4)K3	7007.32		3819.08
F7FL28	F7FL28	F7FL28_RAT	Napsa	Napsin A aspartic peptidase	1	CHFFSLACWFHHR	C(UniMod:4)HFFSLAC(UniMod:4)WFHHR	4	C(UniMod:4)HFFSLAC(UniMod:4)WFHHR4	14840.4	11691.1	9777.62
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	CHFSALVANIIQNVPVHQR	C(UniMod:4)HFSALVANIIQNVPVHQR	3	C(UniMod:4)HFSALVANIIQNVPVHQR3	7698.51	5271.81	12226
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	CHFSALVANIIQNVPVHQR	C(UniMod:4)HFSALVANIIQNVPVHQR	4	C(UniMod:4)HFSALVANIIQNVPVHQR4	14954.1	19151.1	20956.1
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	CHGLGQDLETSFQK	C(UniMod:4)HGLGQDLETSFQK	2	C(UniMod:4)HGLGQDLETSFQK2	1484.47		3014.13
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	CHGLGQDLETSFQK	C(UniMod:4)HGLGQDLETSFQK	3	C(UniMod:4)HGLGQDLETSFQK3	72203.8	84465.4	102463
O88370	O88370	PI42C_RAT	Pip4k2c	Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma	1	CHGNTLLPQFLGMYR	C(UniMod:4)HGNTLLPQFLGMYR	3	C(UniMod:4)HGNTLLPQFLGMYR3	17420	22307.2	14194.1
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	CHIGPDNHYSASTTMDYPSLGLMTEK	C(UniMod:4)HIGPDNHYSASTTMDYPSLGLMTEK	3	C(UniMod:4)HIGPDNHYSASTTMDYPSLGLMTEK3	440822	416019	357816
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	CHIGPDNHYSASTTMDYPSLGLMTEK	C(UniMod:4)HIGPDNHYSASTTMDYPSLGLMTEK	4	C(UniMod:4)HIGPDNHYSASTTMDYPSLGLMTEK4	33560.7	1.755e+06	1.73609e+06
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	CHLEDNMYK	C(UniMod:4)HLEDNMYK	2	C(UniMod:4)HLEDNMYK2	9193.57	15562.4	16271.9
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	CHLEDNMYK	C(UniMod:4)HLEDNMYK	3	C(UniMod:4)HLEDNMYK3	26279.3	29721.1	26329.1
O08815	E9PTG8;O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	0	CHLLVEHETQK	C(UniMod:4)HLLVEHETQK	2	C(UniMod:4)HLLVEHETQK2	5757.24	7037.32	7936.26
O08815	E9PTG8;O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	0	CHLLVEHETQK	C(UniMod:4)HLLVEHETQK	3	C(UniMod:4)HLLVEHETQK3	23087	18042.5	18479.7
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	CHNGGLCDR	C(UniMod:4)HNGGLC(UniMod:4)DR	2	C(UniMod:4)HNGGLC(UniMod:4)DR2			9565.93
P98105	P98105	LYAM2_RAT	Sele	E-selectin	1	CHPGFLGPK	C(UniMod:4)HPGFLGPK	2	C(UniMod:4)HPGFLGPK2		4486.12	6362.14
A0A8I6AL43	A0A8I6AL43	A0A8I6AL43_RAT	Ate1	Arginyl-tRNA--protein transferase 1	1	CHPLQFQPSK	C(UniMod:4)HPLQFQPSK	3	C(UniMod:4)HPLQFQPSK3	6749.52	7094.8	2960.67
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	CHQCTSLMVGLIR	C(UniMod:4)HQC(UniMod:4)TSLMVGLIR	3	C(UniMod:4)HQC(UniMod:4)TSLMVGLIR3	12434.5	17009.1	12034.3
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	CHQYDGLVELATICALCNDSALDYNEAK	C(UniMod:4)HQYDGLVELATIC(UniMod:4)ALC(UniMod:4)NDSALDYNEAK	4	C(UniMod:4)HQYDGLVELATIC(UniMod:4)ALC(UniMod:4)NDSALDYNEAK4	5916.57	3161.94	
Q5M8C6	Q5M8C6	FGL1_RAT	Fgl1	Fibrinogen-like protein 1	1	CHSANLNGVYYQGPYR	C(UniMod:4)HSANLNGVYYQGPYR	3	C(UniMod:4)HSANLNGVYYQGPYR3	13044.2	13627.9	16104.5
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	CHSGECISLDK	C(UniMod:4)HSGEC(UniMod:4)ISLDK	2	C(UniMod:4)HSGEC(UniMod:4)ISLDK2	14049.2	15484.5	14573.2
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	CHSGECISLDK	C(UniMod:4)HSGEC(UniMod:4)ISLDK	3	C(UniMod:4)HSGEC(UniMod:4)ISLDK3	91361.2	103150	94590.4
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	CHSLFHEGYRPQDIAILYR	C(UniMod:4)HSLFHEGYRPQDIAILYR	4	C(UniMod:4)HSLFHEGYRPQDIAILYR4	16826.3		22117.9
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	CHTATCQSPCLNGGK	C(UniMod:4)HTATC(UniMod:4)QSPC(UniMod:4)LNGGK	2	C(UniMod:4)HTATC(UniMod:4)QSPC(UniMod:4)LNGGK2	948.224	1267.22	
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	CHTATCQSPCLNGGK	C(UniMod:4)HTATC(UniMod:4)QSPC(UniMod:4)LNGGK	3	C(UniMod:4)HTATC(UniMod:4)QSPC(UniMod:4)LNGGK3	25012.9	18060.1	9235.64
P21913	P21913	SDHB_RAT	Sdhb	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial	1	CHTIMNCTQTCPK	C(UniMod:4)HTIMNC(UniMod:4)TQTC(UniMod:4)PK	2	C(UniMod:4)HTIMNC(UniMod:4)TQTC(UniMod:4)PK2	3066.73	4970.66	9399.53
P21913	P21913	SDHB_RAT	Sdhb	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial	1	CHTIMNCTQTCPK	C(UniMod:4)HTIMNC(UniMod:4)TQTC(UniMod:4)PK	3	C(UniMod:4)HTIMNC(UniMod:4)TQTC(UniMod:4)PK3	41462.3	52535.8	38978.9
Q5RJM1	Q5RJM1	PORED_RAT	Srd5a3	Polyprenol reductase	1	CHVILSNLR	C(UniMod:4)HVILSNLR	2	C(UniMod:4)HVILSNLR2	9730.16	16099.3	6768.87
D4A264	D4A264	D4A264_RAT	Ptgr3	Zinc binding alcohol dehydrogenase, domain containing 2	1	CHVVGTCSSDEK	C(UniMod:4)HVVGTC(UniMod:4)SSDEK	2	C(UniMod:4)HVVGTC(UniMod:4)SSDEK2			6719.95
A0A8I6AMS6	A0A8I6AMS6	A0A8I6AMS6_RAT	Rangap1	RAN GTPase activating protein 1	1	CHWSDMFTGR	C(UniMod:4)HWSDMFTGR	3	C(UniMod:4)HWSDMFTGR3	12657.3	7770.89	3632.63
A0A0G2QC19	A0A0G2QC19	A0A0G2QC19_RAT	Dnajc21	DnaJ heat shock protein family (Hsp40) member C21	1	CHYEALGVR	C(UniMod:4)HYEALGVR	2	C(UniMod:4)HYEALGVR2	1448.79	3261.53	
Q80YN4	Q80YN4	CORIN_RAT	Corin	Atrial natriuretic peptide-converting enzyme	1	CIAAEWVCDGDHDCVDK	C(UniMod:4)IAAEWVC(UniMod:4)DGDHDC(UniMod:4)VDK	3	C(UniMod:4)IAAEWVC(UniMod:4)DGDHDC(UniMod:4)VDK3	2679.6		1956.26
A0A8I6AVC5	A0A8I6AVC5	A0A8I6AVC5_RAT	Ltbp3	Latent transforming growth factor beta binding protein 3	1	CIACQPGYR	C(UniMod:4)IAC(UniMod:4)QPGYR	2	C(UniMod:4)IAC(UniMod:4)QPGYR2	8599.98	5787.34	4379.04
B5DEN9	B5DEN9	VPS28_RAT	Vps28	Vacuolar protein sorting-associated protein 28 homolog	1	CIADVVSLFITVMDK	C(UniMod:4)IADVVSLFITVMDK	3	C(UniMod:4)IADVVSLFITVMDK3	6427.05		
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	CIAGEVVALNETESSHER	C(UniMod:4)IAGEVVALNETESSHER	3	C(UniMod:4)IAGEVVALNETESSHER3	5614.88	3080.91	2292.09
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	CIAHFCEKPPSVSYSILESVSK	C(UniMod:4)IAHFC(UniMod:4)EKPPSVSYSILESVSK	3	C(UniMod:4)IAHFC(UniMod:4)EKPPSVSYSILESVSK3	1160.3	1632.79	
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	CIAHFCEKPPSVSYSILESVSK	C(UniMod:4)IAHFC(UniMod:4)EKPPSVSYSILESVSK	4	C(UniMod:4)IAHFC(UniMod:4)EKPPSVSYSILESVSK4	45106	42125.6	53604.4
P62076	P62076	TIM13_RAT	Timm13	Mitochondrial import inner membrane translocase subunit Tim13	1	CIAMCMDR	C(UniMod:4)IAMC(UniMod:4)MDR	2	C(UniMod:4)IAMC(UniMod:4)MDR2	27923.1	24668.3	26307.4
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	CIANNQVETLEK	C(UniMod:4)IANNQVETLEK	2	C(UniMod:4)IANNQVETLEK2	11164.7	8313.87	6992.17
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	CIAQMVSSQAANIR	C(UniMod:4)IAQMVSSQAANIR	2	C(UniMod:4)IAQMVSSQAANIR2	3195.49	2828.78	3169.69
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	CIASTTSPLHTHLALR	C(UniMod:4)IASTTSPLHTHLALR	4	C(UniMod:4)IASTTSPLHTHLALR4	3178.54	16745.5	9767.83
Q5U1Y1	Q5U1Y1	RAB34_RAT	Rab34	Ras-related protein Rab-34	1	CIASTYYR	C(UniMod:4)IASTYYR	2	C(UniMod:4)IASTYYR2	11089.1		6298.36
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	CIAVHPTQPFILTSSDDMLIK	C(UniMod:4)IAVHPTQPFILTSSDDMLIK	3	C(UniMod:4)IAVHPTQPFILTSSDDMLIK3	64440	68448.5	75402.3
P58751	P58751	RELN_RAT	Reln	Reelin	1	CICDPGYSGPTCK	C(UniMod:4)IC(UniMod:4)DPGYSGPTC(UniMod:4)K	2	C(UniMod:4)IC(UniMod:4)DPGYSGPTC(UniMod:4)K2	93251.5	112057	87147.5
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	CICEQGFK	C(UniMod:4)IC(UniMod:4)EQGFK	2	C(UniMod:4)IC(UniMod:4)EQGFK2	1.16393e+06	1.2071e+06	1.22728e+06
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CICKPGFQLASDGR	C(UniMod:4)IC(UniMod:4)KPGFQLASDGR	2	C(UniMod:4)IC(UniMod:4)KPGFQLASDGR2	5553.45		4269.27
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CICKPGFQLASDGR	C(UniMod:4)IC(UniMod:4)KPGFQLASDGR	3	C(UniMod:4)IC(UniMod:4)KPGFQLASDGR3	23157.8	18019.6	18792.8
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	CICLPGFTGPR	C(UniMod:4)IC(UniMod:4)LPGFTGPR	2	C(UniMod:4)IC(UniMod:4)LPGFTGPR2	36243	34355.3	42937
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	CICNEGYTGVDCSEVSPPK	C(UniMod:4)IC(UniMod:4)NEGYTGVDC(UniMod:4)SEVSPPK	3	C(UniMod:4)IC(UniMod:4)NEGYTGVDC(UniMod:4)SEVSPPK3	147802	168238	164440
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CICNSGYEVDITGK	C(UniMod:4)IC(UniMod:4)NSGYEVDITGK	2	C(UniMod:4)IC(UniMod:4)NSGYEVDITGK2	15146.8	19761.2	10517.8
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	CICPPGYEVK	C(UniMod:4)IC(UniMod:4)PPGYEVK	2	C(UniMod:4)IC(UniMod:4)PPGYEVK2	9640.73	10299.3	6405.49
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CICPPGYSLQNDK	C(UniMod:4)IC(UniMod:4)PPGYSLQNDK	2	C(UniMod:4)IC(UniMod:4)PPGYSLQNDK2	67019.5	69199	51397.7
D3ZW49	D3ZW49	D3ZW49_RAT	Tmem9b	TMEM9 domain family, member B	1	CICPPYK	C(UniMod:4)IC(UniMod:4)PPYK	2	C(UniMod:4)IC(UniMod:4)PPYK2	30041.4	28452.7	23650.1
Q62609	Q62609	NOE1_RAT	Olfm1	Noelin	1	CICTVVAPQQTMCSR	C(UniMod:4)IC(UniMod:4)TVVAPQQTMC(UniMod:4)SR	2	C(UniMod:4)IC(UniMod:4)TVVAPQQTMC(UniMod:4)SR2	4124.62	6059.33	
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	CIDASLR	C(UniMod:4)IDASLR	2	C(UniMod:4)IDASLR2	79717.7	94544.4	97099.6
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	CIDDCVTGNPSYTCSCLAGFTGR	C(UniMod:4)IDDC(UniMod:4)VTGNPSYTC(UniMod:4)SC(UniMod:4)LAGFTGR	3	C(UniMod:4)IDDC(UniMod:4)VTGNPSYTC(UniMod:4)SC(UniMod:4)LAGFTGR3	13576.6	17640.2	14894.8
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	CIDETMK	C(UniMod:4)IDETMK	1	C(UniMod:4)IDETMK1	3812.44	5966.13	5066.54
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	CIDETMK	C(UniMod:4)IDETMK	2	C(UniMod:4)IDETMK2	457692	463897	531116
F7ESI5	F7ESI5	F7ESI5_RAT	Cfhr1	Complement factor H-related 1	1	CIDGHINYPTCL	C(UniMod:4)IDGHINYPTC(UniMod:4)L	2	C(UniMod:4)IDGHINYPTC(UniMod:4)L2	18632	21744.9	29755.8
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	CIDIDECAQAQHLCSQGR	C(UniMod:4)IDIDEC(UniMod:4)AQAQHLC(UniMod:4)SQGR	3	C(UniMod:4)IDIDEC(UniMod:4)AQAQHLC(UniMod:4)SQGR3	616899	707609	691660
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	CIDLEPDNATTYVHK	C(UniMod:4)IDLEPDNATTYVHK	2	C(UniMod:4)IDLEPDNATTYVHK2	3576.9	6317.6	3064.21
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	CIDLEPDNATTYVHK	C(UniMod:4)IDLEPDNATTYVHK	3	C(UniMod:4)IDLEPDNATTYVHK3	89545.3	98495.5	106759
Q9WVH8	Q9WVH8	FBLN5_RAT	Fbln5	Fibulin-5	1	CIDPIVCEEPYLLIGDNR	C(UniMod:4)IDPIVC(UniMod:4)EEPYLLIGDNR	3	C(UniMod:4)IDPIVC(UniMod:4)EEPYLLIGDNR3	170975	146748	155086
Q63692	Q63692	CDC37_RAT	Cdc37	Hsp90 co-chaperone Cdc37	1	CIDSGLWVPNSK	C(UniMod:4)IDSGLWVPNSK	2	C(UniMod:4)IDSGLWVPNSK2	84977.5	98619.2	68560.7
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	CIDVDECR	C(UniMod:4)IDVDEC(UniMod:4)R	2	C(UniMod:4)IDVDEC(UniMod:4)R2	228133	218905	271015
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	CIDVDECRR	C(UniMod:4)IDVDEC(UniMod:4)RR	3	C(UniMod:4)IDVDEC(UniMod:4)RR3	21057.7	13550	23285.6
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	CIEGGQK	C(UniMod:4)IEGGQK	1	C(UniMod:4)IEGGQK1			72427.3
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	CIEGGQK	C(UniMod:4)IEGGQK	2	C(UniMod:4)IEGGQK2			1.38812e+06
G3V9R2	A0A8I6A1C5;G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	0	CIEGHINYPTCV	C(UniMod:4)IEGHINYPTC(UniMod:4)V	2	C(UniMod:4)IEGHINYPTC(UniMod:4)V2	221552	194868	177137
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	CIEGSYK	C(UniMod:4)IEGSYK	2	C(UniMod:4)IEGSYK2	52216.7	67751.4	57575.3
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	CIEGTCACK	C(UniMod:4)IEGTC(UniMod:4)AC(UniMod:4)K	2	C(UniMod:4)IEGTC(UniMod:4)AC(UniMod:4)K2	254596	352545	
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	CIELDCWDGPDGKPIIYHGWTR	C(UniMod:4)IELDC(UniMod:4)WDGPDGKPIIYHGWTR	4	C(UniMod:4)IELDC(UniMod:4)WDGPDGKPIIYHGWTR4	81978.5	72660.5	87978.9
Q68FW9	Q68FW9	CSN3_RAT	Cops3	COP9 signalosome complex subunit 3	1	CIELDER	C(UniMod:4)IELDER	2	C(UniMod:4)IELDER2	140506	155200	148064
Q5HZV9	Q5HZV9	PP1R7_RAT	Ppp1r7	Protein phosphatase 1 regulatory subunit 7	1	CIENLDELQSLR	C(UniMod:4)IENLDELQSLR	2	C(UniMod:4)IENLDELQSLR2	43366.7	30839.2	40607.8
M0RBH1	M0RBH1	M0RBH1_RAT	Apol2	Apolipoprotein L, 2	1	CIEQSVYAIK	C(UniMod:4)IEQSVYAIK	2	C(UniMod:4)IEQSVYAIK2	1774.77		
Q6B345	Q6B345	S10AB_RAT	S100a11	Protein S100-A11	1	CIESLIAVFQK	C(UniMod:4)IESLIAVFQK	2	C(UniMod:4)IESLIAVFQK2	8771.19	6384.62	3736.09
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	CIEVCCGSVMEMR	C(UniMod:4)IEVC(UniMod:4)C(UniMod:4)GSVMEMR	2	C(UniMod:4)IEVC(UniMod:4)C(UniMod:4)GSVMEMR2	10744.6	2932.05	5134.69
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	CIEVMGDGCLNNEHFEELGGILK	C(UniMod:4)IEVMGDGC(UniMod:4)LNNEHFEELGGILK	3	C(UniMod:4)IEVMGDGC(UniMod:4)LNNEHFEELGGILK3	19178.9	16739.4	10453.6
Q9WTN5	Q9WTN5	TPC1_RAT	Tpcn1	Two pore calcium channel protein 1	1	CIFLVDCR	C(UniMod:4)IFLVDC(UniMod:4)R	2	C(UniMod:4)IFLVDC(UniMod:4)R2	10521.5	5791.21	7406.49
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	CIFYDTEHLK	C(UniMod:4)IFYDTEHLK	2	C(UniMod:4)IFYDTEHLK2	47317.9	44888.7	40509.9
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	CIFYDTEHLK	C(UniMod:4)IFYDTEHLK	3	C(UniMod:4)IFYDTEHLK3	119549	151142	148575
P15650	P15650	ACADL_RAT	Acadl	Long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	CIGAIAMTEPGAGSDLQGVR	C(UniMod:4)IGAIAMTEPGAGSDLQGVR	3	C(UniMod:4)IGAIAMTEPGAGSDLQGVR3	33759.5	36388.7	31529.4
P62076	P62076	TIM13_RAT	Timm13	Mitochondrial import inner membrane translocase subunit Tim13	1	CIGKPGGSLDNSEQK	C(UniMod:4)IGKPGGSLDNSEQK	3	C(UniMod:4)IGKPGGSLDNSEQK3	35944.3	40784.6	29551
A0A8I6A5H5	A0A8I6A5H5	A0A8I6A5H5_RAT	Rela	RELA proto-oncogene, NF-kB subunit	1	CIHSFQNLGIQCVK	C(UniMod:4)IHSFQNLGIQC(UniMod:4)VK	3	C(UniMod:4)IHSFQNLGIQC(UniMod:4)VK3	12740.5	17602.4	9402.14
P23377	P23377	FURIN_RAT	Furin	Furin	1	CIIEILAEPK	C(UniMod:4)IIEILAEPK	2	C(UniMod:4)IIEILAEPK2	9027.91	11594.4	9458.28
O35314	O35314	SCG1_RAT	Chgb	Secretogranin-1	1	CIIEVLSNALSK	C(UniMod:4)IIEVLSNALSK	2	C(UniMod:4)IIEVLSNALSK2	13770	7849.62	10032.5
A0A8I5ZQU7	A0A8I5ZQU7	A0A8I5ZQU7_RAT	Casp7	Caspase 7	1	CIIINNK	C(UniMod:4)IIINNK	2	C(UniMod:4)IIINNK2	8451.62	10065.8	
A0A8I6GBD2	A0A8I6GBD2	A0A8I6GBD2_RAT	Actr10	Actin related protein 10	1	CIIPSVIK	C(UniMod:4)IIPSVIK	2	C(UniMod:4)IIPSVIK2	65531.7	41539.1	106117
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	CIISGWGR	C(UniMod:4)IISGWGR	2	C(UniMod:4)IISGWGR2	805799	818436	732996
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	CIKPNDAK	C(UniMod:4)IKPNDAK	2	C(UniMod:4)IKPNDAK2			58307.1
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	CIKPNEDKVPGR	C(UniMod:4)IKPNEDKVPGR	3	C(UniMod:4)IKPNEDKVPGR3	19451.3	22757	22626
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	CIKPNLK	C(UniMod:4)IKPNLK	2	C(UniMod:4)IKPNLK2	1984.08	4644.51	
Q5HZW5	Q5HZW5	CD320_RAT	Cd320	CD320 antigen	1	CILDDVCIPHTWR	C(UniMod:4)ILDDVC(UniMod:4)IPHTWR	2	C(UniMod:4)ILDDVC(UniMod:4)IPHTWR2	7908.1	5839.46	2629.81
Q5HZW5	Q5HZW5	CD320_RAT	Cd320	CD320 antigen	1	CILDDVCIPHTWR	C(UniMod:4)ILDDVC(UniMod:4)IPHTWR	3	C(UniMod:4)ILDDVC(UniMod:4)IPHTWR3	32419	49759.8	37888.7
D4AD89	D4AD89	D4AD89_RAT	Sez6l	Seizure related 6 homolog like	1	CILGQPSHWSGPLPICK	C(UniMod:4)ILGQPSHWSGPLPIC(UniMod:4)K	3	C(UniMod:4)ILGQPSHWSGPLPIC(UniMod:4)K3			10466.3
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	CILLSNLSSTSHVPK	C(UniMod:4)ILLSNLSSTSHVPK	3	C(UniMod:4)ILLSNLSSTSHVPK3	24844.1	33232.7	20557.5
D3ZF97	D3ZF97	D3ZF97_RAT	Erlec1	Endoplasmic reticulum lectin	1	CILPLVTSGDEEEEKDYK	C(UniMod:4)ILPLVTSGDEEEEKDYK	3	C(UniMod:4)ILPLVTSGDEEEEKDYK3		11808.8	7386.21
Q5XIP1	Q5XIP1	PELO_RAT	Pelo	Protein pelota homolog	1	CILVASPGFVR	C(UniMod:4)ILVASPGFVR	2	C(UniMod:4)ILVASPGFVR2	54064.2	63131.9	59138.6
Q3B7D2	Q3B7D2	SPTC2_RAT	Sptlc2	Serine palmitoyltransferase 2	1	CIMGQDGTSLGK	C(UniMod:4)IMGQDGTSLGK	2	C(UniMod:4)IMGQDGTSLGK2	7016.57	8060.28	5261.17
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	CIMLASR	C(UniMod:4)IMLASR	2	C(UniMod:4)IMLASR2	17196.4	22671.7	19524
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	CINFIETK	C(UniMod:4)INFIETK	2	C(UniMod:4)INFIETK2	26834.3	21352.7	23031.7
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	CINHYGGYLCLPR	C(UniMod:4)INHYGGYLC(UniMod:4)LPR	2	C(UniMod:4)INHYGGYLC(UniMod:4)LPR2	16050.6	25865.4	18003.2
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	CINHYGGYLCLPR	C(UniMod:4)INHYGGYLC(UniMod:4)LPR	3	C(UniMod:4)INHYGGYLC(UniMod:4)LPR3	444958	488414	439447
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CININWR	C(UniMod:4)ININWR	2	C(UniMod:4)ININWR2	97418.7	85726.4	102912
O35806	O35806	LTBP2_RAT	Ltbp2	Latent-transforming growth factor beta-binding protein 2	1	CINMEGSFR	C(UniMod:4)INMEGSFR	2	C(UniMod:4)INMEGSFR2	9936.64	14635.5	5921.15
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	CINQSICEK	C(UniMod:4)INQSIC(UniMod:4)EK	2	C(UniMod:4)INQSIC(UniMod:4)EK2	3611.87	4126.65	
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	CINTAGAFR	C(UniMod:4)INTAGAFR	2	C(UniMod:4)INTAGAFR2	101355	81200.7	92476.7
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	CINTEGSYK	C(UniMod:4)INTEGSYK	2	C(UniMod:4)INTEGSYK2	13974.7	15482.5	42337.3
P63039	P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	1	CIPALDSLKPANEDQK	C(UniMod:4)IPALDSLKPANEDQK	2	C(UniMod:4)IPALDSLKPANEDQK2	19132.7	14964.5	16017.1
P63039	P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	1	CIPALDSLKPANEDQK	C(UniMod:4)IPALDSLKPANEDQK	3	C(UniMod:4)IPALDSLKPANEDQK3	456906	451973	440276
G3V928	G3V928;A0A8I6AQY2	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	0	CIPFWWK	C(UniMod:4)IPFWWK	2	C(UniMod:4)IPFWWK2	181191	218614	205134
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CIPGIFR	C(UniMod:4)IPGIFR	2	C(UniMod:4)IPGIFR2	364496	478370	399139
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	CIPVCGVPTEPFK	C(UniMod:4)IPVC(UniMod:4)GVPTEPFK	2	C(UniMod:4)IPVC(UniMod:4)GVPTEPFK2	1.1233e+07	1.25252e+07	1.27186e+07
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	CIPVCGVPTEPFK	C(UniMod:4)IPVC(UniMod:4)GVPTEPFK	3	C(UniMod:4)IPVC(UniMod:4)GVPTEPFK3	305763	330834	336419
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	CIPVCGVPTEPFKVQQR	C(UniMod:4)IPVC(UniMod:4)GVPTEPFKVQQR	3	C(UniMod:4)IPVC(UniMod:4)GVPTEPFKVQQR3	21152.4	36460.8	59009.3
A0A8I5ZU93	A0A8I5ZU93	A0A8I5ZU93_RAT	Cops7a	COP9 signalosome subunit 7A	1	CIPYAVLLEALALR	C(UniMod:4)IPYAVLLEALALR	2	C(UniMod:4)IPYAVLLEALALR2	3568.34		
D3ZU52	D3ZU52;A0A8I6GIJ6	D3ZU52_RAT	Cops7b	COP9 signalosome subunit 7B	0	CIPYSVLLK	C(UniMod:4)IPYSVLLK	2	C(UniMod:4)IPYSVLLK2	77894.6	69612.6	88052.6
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	CIQEQDRLAQLFIK	C(UniMod:4)IQEQDRLAQLFIK	3	C(UniMod:4)IQEQDRLAQLFIK3		5640.48	12627.7
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	CIQFIYGGCK	C(UniMod:4)IQFIYGGC(UniMod:4)K	2	C(UniMod:4)IQFIYGGC(UniMod:4)K2	217743	210498	203931
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	CIQFIYGGCK	C(UniMod:4)IQFIYGGC(UniMod:4)K	3	C(UniMod:4)IQFIYGGC(UniMod:4)K3	143919	147584	153824
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	CIQFIYGGCKGNGNK	C(UniMod:4)IQFIYGGC(UniMod:4)KGNGNK	2	C(UniMod:4)IQFIYGGC(UniMod:4)KGNGNK2	14178.5	19853.3	11091
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	CIQFIYGGCKGNGNK	C(UniMod:4)IQFIYGGC(UniMod:4)KGNGNK	3	C(UniMod:4)IQFIYGGC(UniMod:4)KGNGNK3	78693.6	106722	118626
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	CIQPPQR	C(UniMod:4)IQPPQR	2	C(UniMod:4)IQPPQR2	277150	278812	285102
A0A8I5ZKS4	A0A8I5ZKS4	A0A8I5ZKS4_RAT	Hycc1	Family with sequence similarity 126, member A	1	CIQVEITPTSSR	C(UniMod:4)IQVEITPTSSR	2	C(UniMod:4)IQVEITPTSSR2	15367.3	22826.3	16235.8
Q63358	Q63358;Q9Z1N3	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	0	CIRSNAEK	C(UniMod:4)IRSNAEK	2	C(UniMod:4)IRSNAEK2			83887.2
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	CISAVETR	C(UniMod:4)ISAVETR	2	C(UniMod:4)ISAVETR2	35764.3		22921.8
D3ZYF5	D3ZYF5	D3ZYF5_RAT	Trim58	Tripartite motif-containing 58	1	CISELCEK	C(UniMod:4)ISELC(UniMod:4)EK	2	C(UniMod:4)ISELC(UniMod:4)EK2	22041.1	16859.9	8149.87
P83121	P83121	UP3_RAT		Urinary protein 3	1	CISFDSTGFCYVGR	C(UniMod:4)ISFDSTGFC(UniMod:4)YVGR	2	C(UniMod:4)ISFDSTGFC(UniMod:4)YVGR2	99852	112262	106073
P83121	P83121	UP3_RAT		Urinary protein 3	1	CISFDSTGFCYVGR	C(UniMod:4)ISFDSTGFC(UniMod:4)YVGR	3	C(UniMod:4)ISFDSTGFC(UniMod:4)YVGR3	7455.03	9584.05	8023.05
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	CISMPVDISGLQGGPR	C(UniMod:4)ISMPVDISGLQGGPR	2	C(UniMod:4)ISMPVDISGLQGGPR2	6476.96	13755.6	10163.6
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	CISNQIR	C(UniMod:4)ISNQIR	2	C(UniMod:4)ISNQIR2	41363.6		32250.3
F7ESI5	F7ESI5	F7ESI5_RAT	Cfhr1	Complement factor H-related 1	1	CISPNSAGK	C(UniMod:4)ISPNSAGK	2	C(UniMod:4)ISPNSAGK2	114560	108514	100384
P23785	P23785	GRN_RAT	Grn	Progranulin	1	CISPTGTHPLLK	C(UniMod:4)ISPTGTHPLLK	3	C(UniMod:4)ISPTGTHPLLK3	11267	16560.4	13273.9
Q7TSU1	D4A631;Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	0	CISQLELAQLIGTGVK	C(UniMod:4)ISQLELAQLIGTGVK	2	C(UniMod:4)ISQLELAQLIGTGVK2	17340.1	8417.42	14319.2
Q7TSU1	D4A631;Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	0	CISQLELAQLIGTGVK	C(UniMod:4)ISQLELAQLIGTGVK	3	C(UniMod:4)ISQLELAQLIGTGVK3	7408.95	3983.77	4222.78
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	CISQLELAQLIGTGVKPR	C(UniMod:4)ISQLELAQLIGTGVKPR	3	C(UniMod:4)ISQLELAQLIGTGVKPR3	16937.3	27667.5	25941
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	CISVAPSR	C(UniMod:4)ISVAPSR	2	C(UniMod:4)ISVAPSR2	32088.9	36310.4	28791.5
P30427	P30427	PLEC_RAT	Plec	Plectin	1	CITDPQTGLCLLPLK	C(UniMod:4)ITDPQTGLC(UniMod:4)LLPLK	2	C(UniMod:4)ITDPQTGLC(UniMod:4)LLPLK2	5927.56	2513.71	2239.37
P98166	P98166	VLDLR_RAT	Vldlr	Very low-density lipoprotein receptor	1	CITLLWK	C(UniMod:4)ITLLWK	2	C(UniMod:4)ITLLWK2	20580.9	23893.9	15507.6
Q80YN4	Q80YN4	CORIN_RAT	Corin	Atrial natriuretic peptide-converting enzyme	1	CIVDGDDR	C(UniMod:4)IVDGDDR	2	C(UniMod:4)IVDGDDR2		7991.28	
D3ZNV6	D3ZNV6	D3ZNV6_RAT	Elmod2	ELMO domain containing 2	1	CIVDIMK	C(UniMod:4)IVDIMK	2	C(UniMod:4)IVDIMK2	15977.4	13970	13876.5
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	CIVDLAGR	C(UniMod:4)IVDLAGR	2	C(UniMod:4)IVDLAGR2	209162	236965	211230
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	CIVESGGPPK	C(UniMod:4)IVESGGPPK	2	C(UniMod:4)IVESGGPPK2	4157.92	7570.9	10745
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	CIVHIHTPAGAAVSAMK	C(UniMod:4)IVHIHTPAGAAVSAMK	3	C(UniMod:4)IVHIHTPAGAAVSAMK3	53113.6	47290.5	70170.6
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	CIVHIHTPAGAAVSAMK	C(UniMod:4)IVHIHTPAGAAVSAMK	4	C(UniMod:4)IVHIHTPAGAAVSAMK4	206941	261705	206232
E9PT90	E9PT90	E9PT90_RAT	Spart	Spartin	1	CIVNNVSAETVQTVR	C(UniMod:4)IVNNVSAETVQTVR	2	C(UniMod:4)IVNNVSAETVQTVR2	6765.31	9544.9	6183.66
M0RCA3	M0RCA3	M0RCA3_RAT	Zfpl1	Zinc finger protein-like 1	1	CIVQSYLQWLQDSDYNPNCR	C(UniMod:4)IVQSYLQWLQDSDYNPNC(UniMod:4)R	3	C(UniMod:4)IVQSYLQWLQDSDYNPNC(UniMod:4)R3	3303.07	5477.53	6464.48
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	CIVQTTSWSQCSK	C(UniMod:4)IVQTTSWSQC(UniMod:4)SK	2	C(UniMod:4)IVQTTSWSQC(UniMod:4)SK2	50246.6	33409.9	35595.2
Q7M0E3	Q7M0E3	DEST_RAT	Dstn	Destrin	1	CIVVEEGK	C(UniMod:4)IVVEEGK	1	C(UniMod:4)IVVEEGK1	2426.4	2493.6	1079.51
Q7M0E3	Q7M0E3	DEST_RAT	Dstn	Destrin	1	CIVVEEGKEILVGDVGVTITDPFK	C(UniMod:4)IVVEEGKEILVGDVGVTITDPFK	3	C(UniMod:4)IVVEEGKEILVGDVGVTITDPFK3	21524.9	19345.1	16620.9
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	CIYCIHALSLYLFK	C(UniMod:4)IYC(UniMod:4)IHALSLYLFK	3	C(UniMod:4)IYC(UniMod:4)IHALSLYLFK3	17524	16316.6	12407
D4ADT7	D4ADT7	D4ADT7_RAT	Nod1	Nucleotide-binding oligomerization domain containing 1	1	CIYETQSQK	C(UniMod:4)IYETQSQK	2	C(UniMod:4)IYETQSQK2	8093.11	8316.99	9363.22
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	CIYNLLQSSSPAVK	C(UniMod:4)IYNLLQSSSPAVK	2	C(UniMod:4)IYNLLQSSSPAVK2	46467.6	45162.5	47394.5
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	CIYNLLQSSSPAVK	C(UniMod:4)IYNLLQSSSPAVK	3	C(UniMod:4)IYNLLQSSSPAVK3	15341.5	25941.2	12512
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	CIYNTAGFYCDR	C(UniMod:4)IYNTAGFYC(UniMod:4)DR	2	C(UniMod:4)IYNTAGFYC(UniMod:4)DR2	58138.5	72750.9	67901.6
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	CIYNTAGFYCDR	C(UniMod:4)IYNTAGFYC(UniMod:4)DR	3	C(UniMod:4)IYNTAGFYC(UniMod:4)DR3	1863.75	4139.23	
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	CKDDEFTHLYTLIVRPDNTYEVK	C(UniMod:4)KDDEFTHLYTLIVRPDNTYEVK	3	C(UniMod:4)KDDEFTHLYTLIVRPDNTYEVK3	8089.07	14556.6	9983.41
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	CKDDEFTHLYTLIVRPDNTYEVK	C(UniMod:4)KDDEFTHLYTLIVRPDNTYEVK	4	C(UniMod:4)KDDEFTHLYTLIVRPDNTYEVK4	128935	334485	164141
P18422	P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	1	CKDGVVFGVEK	C(UniMod:4)KDGVVFGVEK	3	C(UniMod:4)KDGVVFGVEK3	156667	191115	198719
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	CKDNPCVQGDCLITQTPPYYR	C(UniMod:4)KDNPC(UniMod:4)VQGDC(UniMod:4)LITQTPPYYR	3	C(UniMod:4)KDNPC(UniMod:4)VQGDC(UniMod:4)LITQTPPYYR3	73326.1	83053.2	74761.9
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	CKDVLTGHEFNVR	C(UniMod:4)KDVLTGHEFNVR	2	C(UniMod:4)KDVLTGHEFNVR2	1723.58	1369.63	1740.37
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	CKDVLTGHEFNVR	C(UniMod:4)KDVLTGHEFNVR	3	C(UniMod:4)KDVLTGHEFNVR3	17499.9	16821.9	18739.9
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	CKDVLTGHEFNVR	C(UniMod:4)KDVLTGHEFNVR	4	C(UniMod:4)KDVLTGHEFNVR4	56904.7	76279.2	58600.2
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	CKEGFFGNPLAPNPADK	C(UniMod:4)KEGFFGNPLAPNPADK	2	C(UniMod:4)KEGFFGNPLAPNPADK2	2680.61	2521.98	
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	CKEGFFGNPLAPNPADK	C(UniMod:4)KEGFFGNPLAPNPADK	3	C(UniMod:4)KEGFFGNPLAPNPADK3	21650.4	19690.6	22623.9
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	CKEIAEELFSR	C(UniMod:4)KEIAEELFSR	3	C(UniMod:4)KEIAEELFSR3	16295.2	12755.5	17321.1
Q75Q40	Q75Q40	TOM40_RAT	Tomm40	Mitochondrial import receptor subunit TOM40 homolog	1	CKELFPVQMEGVK	C(UniMod:4)KELFPVQMEGVK	3	C(UniMod:4)KELFPVQMEGVK3	5076.64	12220.2	8879.92
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	CKENCEGFELHFWR	C(UniMod:4)KENC(UniMod:4)EGFELHFWR	3	C(UniMod:4)KENC(UniMod:4)EGFELHFWR3	2746.81	2484.68	1723.4
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	CKENCEGFELHFWR	C(UniMod:4)KENC(UniMod:4)EGFELHFWR	4	C(UniMod:4)KENC(UniMod:4)EGFELHFWR4	35745.5	44757.9	32494.4
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	CKEVGIYLNSK	C(UniMod:4)KEVGIYLNSK	2	C(UniMod:4)KEVGIYLNSK2	2833.63		3451.87
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	CKEVGIYLNSK	C(UniMod:4)KEVGIYLNSK	3	C(UniMod:4)KEVGIYLNSK3	84148.2	85625.4	58740
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	CKGLKMEYQVGVTIDLSSFNITR	C(UniMod:4)KGLKMEYQVGVTIDLSSFNITR	3	C(UniMod:4)KGLKMEYQVGVTIDLSSFNITR3	13183.2		
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	CKNTDPGYNCLPCPPR	C(UniMod:4)KNTDPGYNC(UniMod:4)LPC(UniMod:4)PPR	3	C(UniMod:4)KNTDPGYNC(UniMod:4)LPC(UniMod:4)PPR3	5932.9	13059.3	9959.76
P04917	P04917	SRGN_RAT	Srgn	Serglycin	1	CKPDGIFANCIEEK	C(UniMod:4)KPDGIFANC(UniMod:4)IEEK	2	C(UniMod:4)KPDGIFANC(UniMod:4)IEEK2	283775	291191	264657
P04917	P04917	SRGN_RAT	Srgn	Serglycin	1	CKPDGIFANCIEEK	C(UniMod:4)KPDGIFANC(UniMod:4)IEEK	3	C(UniMod:4)KPDGIFANC(UniMod:4)IEEK3	110296	107652	103474
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	CKPGFFGAHCSSR	C(UniMod:4)KPGFFGAHC(UniMod:4)SSR	2	C(UniMod:4)KPGFFGAHC(UniMod:4)SSR2	4725.54	4601.97	3137.35
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	CKPGFFGAHCSSR	C(UniMod:4)KPGFFGAHC(UniMod:4)SSR	3	C(UniMod:4)KPGFFGAHC(UniMod:4)SSR3	35321.8	28894.8	27729.2
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	CKPGFFGDATK	C(UniMod:4)KPGFFGDATK	3	C(UniMod:4)KPGFFGDATK3	31509.2	78330.5	44129.7
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	CKPGFFNLESSNPK	C(UniMod:4)KPGFFNLESSNPK	2	C(UniMod:4)KPGFFNLESSNPK2	24704.2	31367.5	24355.3
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	CKPGFFNLESSNPK	C(UniMod:4)KPGFFNLESSNPK	3	C(UniMod:4)KPGFFNLESSNPK3	122096	100825	138260
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	CKPISMVGAEQLLLDTHSLK	C(UniMod:4)KPISMVGAEQLLLDTHSLK	4	C(UniMod:4)KPISMVGAEQLLLDTHSLK4	13067.5	11553	7275.45
D3ZDR7	D3ZDR7	D3ZDR7_RAT	Themis2	Thymocyte selection associated family member 2	1	CKPSAPQTLLQILQDPAMK	C(UniMod:4)KPSAPQTLLQILQDPAMK	3	C(UniMod:4)KPSAPQTLLQILQDPAMK3	9782.86		5888.68
A0A096MJX4	A0A096MJX4	A0A096MJX4_RAT	Fsip2	Fibrous sheath-interacting protein 2	1	CKTIIFSANVSFHER	C(UniMod:4)KTIIFSANVSFHER	3	C(UniMod:4)KTIIFSANVSFHER3	18228.8	11442.1	9577.3
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	CKVLDMTSVIR	C(UniMod:4)KVLDMTSVIR	3	C(UniMod:4)KVLDMTSVIR3	2972.55	7792.24	6810.56
P20760	P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	1	CKVNSGAFPAPIEK	C(UniMod:4)KVNSGAFPAPIEK	3	C(UniMod:4)KVNSGAFPAPIEK3			8825.13
P11980	P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	1	CLAAALIVLTESGR	C(UniMod:4)LAAALIVLTESGR	2	C(UniMod:4)LAAALIVLTESGR2	10597.9	7964.98	8969.86
P14882	P14882	PCCA_RAT	Pcca	Propionyl-CoA carboxylase alpha chain, mitochondrial	1	CLAAEDVTFIGPDTHAIQAMGDK	C(UniMod:4)LAAEDVTFIGPDTHAIQAMGDK	3	C(UniMod:4)LAAEDVTFIGPDTHAIQAMGDK3	11652.4	15811.6	15352.4
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	CLAENAVYLCDR	C(UniMod:4)LAENAVYLC(UniMod:4)DR	2	C(UniMod:4)LAENAVYLC(UniMod:4)DR2	11110.9	20363.5	16613.4
D3ZXY2	D3ZXY2	D3ZXY2_RAT	Pdzd8	PDZ domain containing 8	1	CLAETPLCGATER	C(UniMod:4)LAETPLC(UniMod:4)GATER	2	C(UniMod:4)LAETPLC(UniMod:4)GATER2	3679.14	4840.05	3669.46
A0A8I5ZK60	A0A8I5ZK60	A0A8I5ZK60_RAT	Ccer2	Coiled-coil glutamate-rich protein 2	1	CLAEVVMEVLTLGQAQR	C(UniMod:4)LAEVVMEVLTLGQAQR	3	C(UniMod:4)LAEVVMEVLTLGQAQR3		3973.33	7601.37
P62959	P62959;A0A8I5ZQ74	HINT1_RAT	Hint1	Adenosine 5'-monophosphoramidase HINT1	0	CLAFHDISPQAPTHFLVIPK	C(UniMod:4)LAFHDISPQAPTHFLVIPK	3	C(UniMod:4)LAFHDISPQAPTHFLVIPK3	3907.02		
P62959	P62959;A0A8I5ZQ74	HINT1_RAT	Hint1	Adenosine 5'-monophosphoramidase HINT1	0	CLAFHDISPQAPTHFLVIPK	C(UniMod:4)LAFHDISPQAPTHFLVIPK	4	C(UniMod:4)LAFHDISPQAPTHFLVIPK4	23225.5	9165.63	9249
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	CLAGYYGDPIIGSGDHCRPCPCPDGPDSGR	C(UniMod:4)LAGYYGDPIIGSGDHC(UniMod:4)RPC(UniMod:4)PC(UniMod:4)PDGPDSGR	4	C(UniMod:4)LAGYYGDPIIGSGDHC(UniMod:4)RPC(UniMod:4)PC(UniMod:4)PDGPDSGR4	49363.4	67533	45286.5
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	CLALATHDNPLR	C(UniMod:4)LALATHDNPLR	2	C(UniMod:4)LALATHDNPLR2	20122.6	15367.5	8756.08
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	CLALATHDNPLR	C(UniMod:4)LALATHDNPLR	3	C(UniMod:4)LALATHDNPLR3	263489	289440	288513
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	CLALATHDNPLRR	C(UniMod:4)LALATHDNPLRR	3	C(UniMod:4)LALATHDNPLRR3	372609	374076	344544
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	CLALATHDNPLRR	C(UniMod:4)LALATHDNPLRR	4	C(UniMod:4)LALATHDNPLRR4	301590	331116	308713
P18596	P18596;Q64578	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	0	CLALATR	C(UniMod:4)LALATR	2	C(UniMod:4)LALATR2	1.82793e+06	2.0223e+06	1.97898e+06
P43253	P43253	PI2R_RAT	Ptgir	Prostacyclin receptor	1	CLALSHPYLYAQLDGPR	C(UniMod:4)LALSHPYLYAQLDGPR	3	C(UniMod:4)LALSHPYLYAQLDGPR3	19376.8	3239.05	8310.25
P51607	P51607	RENBP_RAT	Renbp	N-acylglucosamine 2-epimerase	1	CLAMCEQILGALLQR	C(UniMod:4)LAMC(UniMod:4)EQILGALLQR	3	C(UniMod:4)LAMC(UniMod:4)EQILGALLQR3	2185.01	1065.6	2319.35
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	CLAMDVQAFER	C(UniMod:4)LAMDVQAFER	2	C(UniMod:4)LAMDVQAFER2	248795	220481	225849
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	CLAMDVQAFER	C(UniMod:4)LAMDVQAFER	3	C(UniMod:4)LAMDVQAFER3	5393.01	5538.8	5554.9
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	CLANLRPLLDSGTMGTK	C(UniMod:4)LANLRPLLDSGTMGTK	3	C(UniMod:4)LANLRPLLDSGTMGTK3	33667.8	45416.2	44109.9
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	CLAPDVYPIDR	C(UniMod:4)LAPDVYPIDR	2	C(UniMod:4)LAPDVYPIDR2	225667	174075	181172
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	CLAPDVYPIDRLEIELFK	C(UniMod:4)LAPDVYPIDRLEIELFK	3	C(UniMod:4)LAPDVYPIDRLEIELFK3	95943.5	88839.1	82137
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	CLAPDVYPIDRLEIELFKGDR	C(UniMod:4)LAPDVYPIDRLEIELFKGDR	4	C(UniMod:4)LAPDVYPIDRLEIELFKGDR4	12739.2	20781.1	5755.82
A0A8I6AD02	A0A8I6AD02	A0A8I6AD02_RAT	ENSRNOG00000069655	Glyceraldehyde 3-phosphate dehydrogenase NAD(P) binding domain-containing protein	1	CLAPLAK	C(UniMod:4)LAPLAK	1	C(UniMod:4)LAPLAK1	7178.71	4390.71	
A0A8I6AD02	A0A8I6AD02	A0A8I6AD02_RAT	ENSRNOG00000069655	Glyceraldehyde 3-phosphate dehydrogenase NAD(P) binding domain-containing protein	1	CLAPLAK	C(UniMod:4)LAPLAK	2	C(UniMod:4)LAPLAK2	693521	587900	563008
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	CLAPMMSEVIR	C(UniMod:4)LAPMMSEVIR	2	C(UniMod:4)LAPMMSEVIR2	223356	237005	269668
D4A3I5	D4A3I5	D4A3I5_RAT	Fhip2a	FHF complex subunit HOOK interacting protein 2A	1	CLAQSTCLCELLTGR	C(UniMod:4)LAQSTC(UniMod:4)LC(UniMod:4)ELLTGR	2	C(UniMod:4)LAQSTC(UniMod:4)LC(UniMod:4)ELLTGR2	8415.93	5620.45	16734.4
Q5FWS5	Q5FWS5	Q5FWS5_RAT	Loxl1	Lysyl oxidase homolog	1	CLASTAYAPEATDYDLR	C(UniMod:4)LASTAYAPEATDYDLR	2	C(UniMod:4)LASTAYAPEATDYDLR2	73753.1	60217	62487.1
Q5FWS5	Q5FWS5	Q5FWS5_RAT	Loxl1	Lysyl oxidase homolog	1	CLASTAYAPEATDYDLR	C(UniMod:4)LASTAYAPEATDYDLR	3	C(UniMod:4)LASTAYAPEATDYDLR3	12109.8	15100.8	6902.08
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	CLAVHPDK	C(UniMod:4)LAVHPDK	2	C(UniMod:4)LAVHPDK2	3117.85		8527.94
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	CLAVHPDMVTIATGQVAGTTK	C(UniMod:4)LAVHPDMVTIATGQVAGTTK	3	C(UniMod:4)LAVHPDMVTIATGQVAGTTK3	33011.4	34249.2	48541.7
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	CLAVHPDR	C(UniMod:4)LAVHPDR	2	C(UniMod:4)LAVHPDR2	10247.9	13467.6	22107.7
Q63678	Q63678	ZA2G_RAT	Azgp1	Zinc-alpha-2-glycoprotein	1	CLAYDFYPQR	C(UniMod:4)LAYDFYPQR	2	C(UniMod:4)LAYDFYPQR2	82658.6	90990	75577.7
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	CLCDAGWVGINCEVDK	C(UniMod:4)LC(UniMod:4)DAGWVGINC(UniMod:4)EVDK	2	C(UniMod:4)LC(UniMod:4)DAGWVGINC(UniMod:4)EVDK2	9540.96	16054.8	4344.26
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	CLCDAGWVGINCEVDK	C(UniMod:4)LC(UniMod:4)DAGWVGINC(UniMod:4)EVDK	3	C(UniMod:4)LC(UniMod:4)DAGWVGINC(UniMod:4)EVDK3	5578.42	7313.65	4865.24
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	CLCLPGFSGPR	C(UniMod:4)LC(UniMod:4)LPGFSGPR	2	C(UniMod:4)LC(UniMod:4)LPGFSGPR2	16558.5	19162.7	17746.9
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	CLCLQALAIVYGR	C(UniMod:4)LC(UniMod:4)LQALAIVYGR	2	C(UniMod:4)LC(UniMod:4)LQALAIVYGR2	1613.82	1840.3	3116.72
Q9EQL9	Q9EQL9	SHRPN_RAT	Sharpin	Sharpin	1	CLCMPER	C(UniMod:4)LC(UniMod:4)MPER	2	C(UniMod:4)LC(UniMod:4)MPER2		10806.3	4241.11
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	CLCNEGYELTPDGK	C(UniMod:4)LC(UniMod:4)NEGYELTPDGK	2	C(UniMod:4)LC(UniMod:4)NEGYELTPDGK2	4124.82	2116.99	3353.56
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	CLCPASNPLCR	C(UniMod:4)LC(UniMod:4)PASNPLC(UniMod:4)R	2	C(UniMod:4)LC(UniMod:4)PASNPLC(UniMod:4)R2	609384	648000	528377
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CLCPEGFSLSSTGR	C(UniMod:4)LC(UniMod:4)PEGFSLSSTGR	2	C(UniMod:4)LC(UniMod:4)PEGFSLSSTGR2	88118.9	112094	107834
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	CLCPPDFAGK	C(UniMod:4)LC(UniMod:4)PPDFAGK	2	C(UniMod:4)LC(UniMod:4)PPDFAGK2	16880.9	14179.2	15538.8
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	CLCQAGYTGR	C(UniMod:4)LC(UniMod:4)QAGYTGR	2	C(UniMod:4)LC(UniMod:4)QAGYTGR2	1721.5	5273.87	
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CLCVEGYAPR	C(UniMod:4)LC(UniMod:4)VEGYAPR	2	C(UniMod:4)LC(UniMod:4)VEGYAPR2	264114	342720	317655
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CLCYDGFMASEDMK	C(UniMod:4)LC(UniMod:4)YDGFMASEDMK	2	C(UniMod:4)LC(UniMod:4)YDGFMASEDMK2	19821.3	20222.6	12412
P04905	P08010;P04905;Q5BK56	GSTM1_RAT	Gstm1	Glutathione S-transferase Mu 1	0	CLDAFPNLK	C(UniMod:4)LDAFPNLK	2	C(UniMod:4)LDAFPNLK2	14143.6	13882.4	12434.3
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	CLDAVVSTR	C(UniMod:4)LDAVVSTR	2	C(UniMod:4)LDAVVSTR2	231276	241519	175399
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	CLDCADDLCQACADGHR	C(UniMod:4)LDC(UniMod:4)ADDLC(UniMod:4)QAC(UniMod:4)ADGHR	3	C(UniMod:4)LDC(UniMod:4)ADDLC(UniMod:4)QAC(UniMod:4)ADGHR3	8008.81	9332.29	16068.7
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	CLDDDTYMK	C(UniMod:4)LDDDTYMK	2	C(UniMod:4)LDDDTYMK2	24753.5	19851.3	26865.2
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	CLDDHKYK	C(UniMod:4)LDDHKYK	2	C(UniMod:4)LDDHKYK2			6996.48
A0A8I6AA08	A0A8I6AA08	A0A8I6AA08_RAT	Septin6	Septin	1	CLDEEMNAFK	C(UniMod:4)LDEEMNAFK	2	C(UniMod:4)LDEEMNAFK2	12341.2	10985.5	8241.52
P97682	P97682	ESM1_RAT	Esm1	Endothelial cell-specific molecule 1	1	CLDFPFFQYAAAK	C(UniMod:4)LDFPFFQYAAAK	2	C(UniMod:4)LDFPFFQYAAAK2	16940.3	22674.5	12455.5
E9PU10	E9PU10	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	1	CLDFWSFVK	C(UniMod:4)LDFWSFVK	2	C(UniMod:4)LDFWSFVK2	38949.9	68429.4	69986.5
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	CLDGIVK	C(UniMod:4)LDGIVK	2	C(UniMod:4)LDGIVK2	32072.2	34763.3	30399.7
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	CLDLVDK	C(UniMod:4)LDLVDK	2	C(UniMod:4)LDLVDK2	48530.6	53846.7	52145.4
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	CLDPMVYMNDK	C(UniMod:4)LDPMVYMNDK	2	C(UniMod:4)LDPMVYMNDK2	24973.5	38508.9	53189.4
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	CLDPMVYMNDKSPLTPEK	C(UniMod:4)LDPMVYMNDKSPLTPEK	3	C(UniMod:4)LDPMVYMNDKSPLTPEK3	4763.68	8451.59	5442.27
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	CLDQQCELR	C(UniMod:4)LDQQC(UniMod:4)ELR	2	C(UniMod:4)LDQQC(UniMod:4)ELR2	38169.5	29904.2	21878.4
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	CLDSYLHYVPR	C(UniMod:4)LDSYLHYVPR	3	C(UniMod:4)LDSYLHYVPR3	34004.5	32215.3	37378.9
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	CLEALGEWGQLHQQCCEK	C(UniMod:4)LEALGEWGQLHQQC(UniMod:4)C(UniMod:4)EK	3	C(UniMod:4)LEALGEWGQLHQQC(UniMod:4)C(UniMod:4)EK3	7483.57	9007.07	11639.2
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	CLECGYEGWR	C(UniMod:4)LEC(UniMod:4)GYEGWR	2	C(UniMod:4)LEC(UniMod:4)GYEGWR2	8250.76	5533.85	7923.08
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	CLEDEQMLQAIR	C(UniMod:4)LEDEQMLQAIR	2	C(UniMod:4)LEDEQMLQAIR2	29651.1	35480.4	21227.5
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	CLEDEQMLQAIR	C(UniMod:4)LEDEQMLQAIR	3	C(UniMod:4)LEDEQMLQAIR3	3305.41	7630.15	6938.33
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	CLEDEQMLQAIRK	C(UniMod:4)LEDEQMLQAIRK	3	C(UniMod:4)LEDEQMLQAIRK3	8817.46	7721.99	7244.77
P0CE43	P0CE43	GRB10_RAT	Grb10	Growth factor receptor-bound protein 10	1	CLEDHEIVVQVESTMPSESK	C(UniMod:4)LEDHEIVVQVESTMPSESK	3	C(UniMod:4)LEDHEIVVQVESTMPSESK3	8798.31	9671.06	10166.7
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	CLEDIFDALEGK	C(UniMod:4)LEDIFDALEGK	2	C(UniMod:4)LEDIFDALEGK2	13036.6	15457.2	7951.4
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	CLEDSLEQK	C(UniMod:4)LEDSLEQK	2	C(UniMod:4)LEDSLEQK2	29827.5	35579.2	33248.7
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	CLEEFELLGK	C(UniMod:4)LEEFELLGK	2	C(UniMod:4)LEEFELLGK2	99487.3	93455	103239
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	CLEELQK	C(UniMod:4)LEELQK	1	C(UniMod:4)LEELQK1	6667.69	5335.38	4935.83
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	CLEELQK	C(UniMod:4)LEELQK	2	C(UniMod:4)LEELQK2	84988.5	95832.1	79766
P24942	P24942	EAA1_RAT	Slc1a3	Excitatory amino acid transporter 1	1	CLEENNGVDKR	C(UniMod:4)LEENNGVDKR	2	C(UniMod:4)LEENNGVDKR2	4818.09		
Q6TMG5	Q6TMG5	NEMO_RAT	Ikbkg	NF-kappa-B essential modulator	1	CLEENQELR	C(UniMod:4)LEENQELR	2	C(UniMod:4)LEENQELR2	17693.6	9203.41	7577.1
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	CLEEQGLK	C(UniMod:4)LEEQGLK	2	C(UniMod:4)LEEQGLK2	203375	219334	180872
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	CLEGMILAAK	C(UniMod:4)LEGMILAAK	2	C(UniMod:4)LEGMILAAK2	278780	281516	234827
D4A3L3	D4A3L3	D4A3L3_RAT	Megf9	Multiple EGF-like-domains 9	1	CLEGYVR	C(UniMod:4)LEGYVR	2	C(UniMod:4)LEGYVR2	147873	160018	131587
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	CLEGYVVDTDTDTFTCQQDGR	C(UniMod:4)LEGYVVDTDTDTFTC(UniMod:4)QQDGR	3	C(UniMod:4)LEGYVVDTDTDTFTC(UniMod:4)QQDGR3	9787.55	6246.96	12467.6
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	CLEIGALTR	C(UniMod:4)LEIGALTR	2	C(UniMod:4)LEIGALTR2	53752.5	51159.6	71589.5
D3ZMA2	D3ZMA2	D3ZMA2_RAT	Mtmr14	Myotubularin related protein 14	1	CLELFGR	C(UniMod:4)LELFGR	2	C(UniMod:4)LELFGR2	23413.3	9145.61	8629.87
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	CLELFSELAEDKENYK	C(UniMod:4)LELFSELAEDKENYK	3	C(UniMod:4)LELFSELAEDKENYK3	39066.3	42318.4	43609.3
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	CLELFSELAEDKENYKK	C(UniMod:4)LELFSELAEDKENYKK	3	C(UniMod:4)LELFSELAEDKENYKK3	16656.8	22563.6	11541.1
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	CLELFSELAEDKENYKK	C(UniMod:4)LELFSELAEDKENYKK	4	C(UniMod:4)LELFSELAEDKENYKK4	58950	65947.4	44933.7
P82995	P82995;A0A8I5ZQP6;A0A8I5ZUJ0	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	CLELFTELAEDKENYK	C(UniMod:4)LELFTELAEDKENYK	3	C(UniMod:4)LELFTELAEDKENYK3	17963.2	18118.9	27877.3
P82995	P82995;A0A8I5ZQP6;A0A8I5ZUJ0	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	CLELFTELAEDKENYKK	C(UniMod:4)LELFTELAEDKENYKK	3	C(UniMod:4)LELFTELAEDKENYKK3	9686.09	24550.4	17846.2
P82995	P82995;A0A8I5ZQP6;A0A8I5ZUJ0	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	CLELFTELAEDKENYKK	C(UniMod:4)LELFTELAEDKENYKK	4	C(UniMod:4)LELFTELAEDKENYKK4	47421.8	43745.5	42478.6
Q5M9G9	Q5M9G9	FAKD4_RAT	Tbrg4	FAST kinase domain-containing protein 4	1	CLELVEQFGPDELRK	C(UniMod:4)LELVEQFGPDELRK	3	C(UniMod:4)LELVEQFGPDELRK3	7322.09	11311.9	3932.73
Q9ERE6	Q9ERE6	MPRIP_RAT	Mprip	Myosin phosphatase Rho-interacting protein	1	CLENAHLAQALEAER	C(UniMod:4)LENAHLAQALEAER	3	C(UniMod:4)LENAHLAQALEAER3	7542.11	3588.14	2979.89
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	CLEQQSESR	C(UniMod:4)LEQQSESR	2	C(UniMod:4)LEQQSESR2	6984.47		14624.8
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	CLETLAIQCGHK	C(UniMod:4)LETLAIQC(UniMod:4)GHK	2	C(UniMod:4)LETLAIQC(UniMod:4)GHK2	54522	50304.5	41594.1
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	CLETLAIQCGHK	C(UniMod:4)LETLAIQC(UniMod:4)GHK	3	C(UniMod:4)LETLAIQC(UniMod:4)GHK3	232942	294702	221361
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	CLETLAIQCGHKK	C(UniMod:4)LETLAIQC(UniMod:4)GHKK	2	C(UniMod:4)LETLAIQC(UniMod:4)GHKK2	5194.99	2007.13	1192.11
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	CLETLAIQCGHKK	C(UniMod:4)LETLAIQC(UniMod:4)GHKK	3	C(UniMod:4)LETLAIQC(UniMod:4)GHKK3	33581.3	34012.8	27163.1
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	CLETLAIQCGHKK	C(UniMod:4)LETLAIQC(UniMod:4)GHKK	4	C(UniMod:4)LETLAIQC(UniMod:4)GHKK4	53153.6	56606.8	68740.7
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	CLEVLQASDNALENVDGVANLPR	C(UniMod:4)LEVLQASDNALENVDGVANLPR	3	C(UniMod:4)LEVLQASDNALENVDGVANLPR3	8705	4897.28	6672.81
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	CLEYLLR	C(UniMod:4)LEYLLR	2	C(UniMod:4)LEYLLR2	12722.3	16612	12915.3
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	CLFASGSPFEPVR	C(UniMod:4)LFASGSPFEPVR	2	C(UniMod:4)LFASGSPFEPVR2	21803.7	26735.2	26340.7
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	CLFTLLGHLDYIR	C(UniMod:4)LFTLLGHLDYIR	2	C(UniMod:4)LFTLLGHLDYIR2	28405.7	16245.5	
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	CLFTLLGHLDYIR	C(UniMod:4)LFTLLGHLDYIR	3	C(UniMod:4)LFTLLGHLDYIR3	44012.3	52229.3	46404.7
O35532	O35532	MSMO1_RAT	Msmo1	Methylsterol monooxygenase 1	1	CLGCAVIEDTWHYFLHR	C(UniMod:4)LGC(UniMod:4)AVIEDTWHYFLHR	4	C(UniMod:4)LGC(UniMod:4)AVIEDTWHYFLHR4		2697.45	1488.55
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	CLGDMEANHCHDCK	C(UniMod:4)LGDMEANHC(UniMod:4)HDC(UniMod:4)K	3	C(UniMod:4)LGDMEANHC(UniMod:4)HDC(UniMod:4)K3	65892	69458.1	44955.4
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	CLGDMEANHCHDCK	C(UniMod:4)LGDMEANHC(UniMod:4)HDC(UniMod:4)K	4	C(UniMod:4)LGDMEANHC(UniMod:4)HDC(UniMod:4)K4	54769.2	69965.5	56265.5
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	CLGDMEANHCHDCKR	C(UniMod:4)LGDMEANHC(UniMod:4)HDC(UniMod:4)KR	4	C(UniMod:4)LGDMEANHC(UniMod:4)HDC(UniMod:4)KR4	8713.43	10720.5	4784.18
Q68EJ0	Q68EJ0	NB5R4_RAT	Cyb5r4	Cytochrome b5 reductase 4	1	CLGDPLEK	C(UniMod:4)LGDPLEK	2	C(UniMod:4)LGDPLEK2	8000.81		7229.47
P48500	A0A0G2JWU1;A0A8I5ZVI4;P48500	TPIS_RAT	Tpi1	Triosephosphate isomerase	0	CLGELICTLNAAK	C(UniMod:4)LGELIC(UniMod:4)TLNAAK	2	C(UniMod:4)LGELIC(UniMod:4)TLNAAK2	50671.6	39959.7	51176.5
P48500	A0A0G2JWU1;A0A8I5ZVI4;P48500	TPIS_RAT	Tpi1	Triosephosphate isomerase	0	CLGELICTLNAAK	C(UniMod:4)LGELIC(UniMod:4)TLNAAK	3	C(UniMod:4)LGELIC(UniMod:4)TLNAAK3	2773.13		2884.84
A0A8I5ZRG3	A0A8I5ZRG3	A0A8I5ZRG3_RAT	Frmd4b	FERM domain containing 4B	1	CLGFAGLQVPCSPSSR	C(UniMod:4)LGFAGLQVPC(UniMod:4)SPSSR	2	C(UniMod:4)LGFAGLQVPC(UniMod:4)SPSSR2	4696.7	11638.4	9573.49
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	CLGFSDK	C(UniMod:4)LGFSDK	2	C(UniMod:4)LGFSDK2	32919.9	31235.7	24999.1
D4A8B0	D4A8B0	D4A8B0_RAT	Sec14l5	SEC14-like lipid binding 5	1	CLGHLSPMQESCLVQLR	C(UniMod:4)LGHLSPMQESC(UniMod:4)LVQLR	3	C(UniMod:4)LGHLSPMQESC(UniMod:4)LVQLR3	4761.15	5445.21	7986.66
Q02769	Q02769	FDFT_RAT	Fdft1	Squalene synthase	1	CLGHPEEFYNLLR	C(UniMod:4)LGHPEEFYNLLR	3	C(UniMod:4)LGHPEEFYNLLR3	3378.21		3888.67
O08619	O08619;B5DF57	F13A_RAT	F13a1	Coagulation factor XIII A chain	0	CLGIPAR	C(UniMod:4)LGIPAR	2	C(UniMod:4)LGIPAR2	647608	563033	547574
Q9WVJ6	Q9WVJ6;A0A0G2K142	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	0	CLGIPTR	C(UniMod:4)LGIPTR	2	C(UniMod:4)LGIPTR2	25422.1	24967.4	28966
Q5XIG6	Q5XIG6	GALK2_RAT	Galk2	N-acetylgalactosamine kinase	1	CLGISLEELR	C(UniMod:4)LGISLEELR	2	C(UniMod:4)LGISLEELR2	10745.2	5580.92	9340.55
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	CLGNPER	C(UniMod:4)LGNPER	2	C(UniMod:4)LGNPER2	70495.6	58412.5	64712.9
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	CLGPLVGK	C(UniMod:4)LGPLVGK	2	C(UniMod:4)LGPLVGK2	11880	13790.7	
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	CLGPLVSK	C(UniMod:4)LGPLVSK	2	C(UniMod:4)LGPLVSK2	215652	207798	181461
M0R8A3	M0R8A3	M0R8A3_RAT	Gp6	Glycoprotein 6 (platelet)	1	CLGPSDADLYR	C(UniMod:4)LGPSDADLYR	2	C(UniMod:4)LGPSDADLYR2	301149	272930	293696
Q05764	Q05764	ADDB_RAT	Add2	Beta-adducin	1	CLGPTCK	C(UniMod:4)LGPTC(UniMod:4)K	2	C(UniMod:4)LGPTC(UniMod:4)K2	2.64589e+06	2.9814e+06	3.12509e+06
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	CLHACGISLFDLEK	C(UniMod:4)LHAC(UniMod:4)GISLFDLEK	3	C(UniMod:4)LHAC(UniMod:4)GISLFDLEK3	8993.71	10676.6	8704.39
A0A0G2K975	A0A0G2K975	A0A0G2K975_RAT	Cfhr4	Similar to complement factor H-related protein	1	CLHACVLTEEIMR	C(UniMod:4)LHAC(UniMod:4)VLTEEIMR	3	C(UniMod:4)LHAC(UniMod:4)VLTEEIMR3	4460.22	6704.87	1665.61
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	CLHILTK	C(UniMod:4)LHILTK	2	C(UniMod:4)LHILTK2		5785.57	
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	CLHIVTEAVTPLGTYLK	C(UniMod:4)LHIVTEAVTPLGTYLK	2	C(UniMod:4)LHIVTEAVTPLGTYLK2	105092		69283.3
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	CLHIVTEAVTPLGTYLK	C(UniMod:4)LHIVTEAVTPLGTYLK	3	C(UniMod:4)LHIVTEAVTPLGTYLK3	13637.8	10465.2	13959.4
Q5U211	Q5U211	SNX3_RAT	Snx3	Sorting nexin-3	1	CLHMFLQDEIIDK	C(UniMod:4)LHMFLQDEIIDK	3	C(UniMod:4)LHMFLQDEIIDK3	9446.7	12773.8	8125.78
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	CLHPCIISIEIMR	C(UniMod:4)LHPC(UniMod:4)IISIEIMR	2	C(UniMod:4)LHPC(UniMod:4)IISIEIMR2	65293	48699.3	48516.4
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	CLHPCIISIEIMR	C(UniMod:4)LHPC(UniMod:4)IISIEIMR	3	C(UniMod:4)LHPC(UniMod:4)IISIEIMR3	233468	179039	148626
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	CLHPLASETFVSK	C(UniMod:4)LHPLASETFVSK	2	C(UniMod:4)LHPLASETFVSK2	52943.3	49742.9	50364.9
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	CLHPLASETFVSK	C(UniMod:4)LHPLASETFVSK	3	C(UniMod:4)LHPLASETFVSK3	303351	279808	299903
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	CLHSVGQPLTGHGDPVGR	C(UniMod:4)LHSVGQPLTGHGDPVGR	3	C(UniMod:4)LHSVGQPLTGHGDPVGR3	13712	11515.2	11461.3
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	CLHSVGQPLTGHGDPVGR	C(UniMod:4)LHSVGQPLTGHGDPVGR	4	C(UniMod:4)LHSVGQPLTGHGDPVGR4	70469.4	43067.4	60278.2
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	CLIATGGTPR	C(UniMod:4)LIATGGTPR	2	C(UniMod:4)LIATGGTPR2	173635	154084	178729
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	CLIDLGK	C(UniMod:4)LIDLGK	2	C(UniMod:4)LIDLGK2	33800.5	32788.5	33442.3
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	CLIHEGATPISLEWK	C(UniMod:4)LIHEGATPISLEWK	3	C(UniMod:4)LIHEGATPISLEWK3	19995.6	22762.2	18602.8
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	CLIIGAGPCGLR	C(UniMod:4)LIIGAGPC(UniMod:4)GLR	2	C(UniMod:4)LIIGAGPC(UniMod:4)GLR2	4339.33	9690.93	11843.8
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	CLILPARPALDSELLTCHSAEYVER	C(UniMod:4)LILPARPALDSELLTC(UniMod:4)HSAEYVER	4	C(UniMod:4)LILPARPALDSELLTC(UniMod:4)HSAEYVER4	14285.1	22345.5	27564.1
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	CLILWDDILPNSK	C(UniMod:4)LILWDDILPNSK	2	C(UniMod:4)LILWDDILPNSK2		3739.03	2859.88
Q64244	Q64244	CD38_RAT	Cd38	ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1	1	CLIYTQILRPEMR	C(UniMod:4)LIYTQILRPEMR	3	C(UniMod:4)LIYTQILRPEMR3	343680	304662	376946
P62944	P52303;P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	CLKDEDPYVR	C(UniMod:4)LKDEDPYVR	2	C(UniMod:4)LKDEDPYVR2	20198.9	12883.2	11198.4
P62944	P52303;P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	CLKDEDPYVR	C(UniMod:4)LKDEDPYVR	3	C(UniMod:4)LKDEDPYVR3	118074	121604	87350.1
P62944	P52303;P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	CLKDEDPYVRK	C(UniMod:4)LKDEDPYVRK	3	C(UniMod:4)LKDEDPYVRK3	36893.6	54035.7	42217.6
D3ZUU6	D3ZUU6	D3ZUU6_RAT	Clec3b	C-type lectin domain family 3, member B	1	CLLAFTQPK	C(UniMod:4)LLAFTQPK	2	C(UniMod:4)LLAFTQPK2	49149.7	63119.3	75520.3
Q4FZU0	Q4FZU0	Q4FZU0_RAT	Acp6	Acid phosphatase 6, lysophosphatidic	1	CLLAGLFQR	C(UniMod:4)LLAGLFQR	2	C(UniMod:4)LLAGLFQR2	24592.5	15152.2	12273.4
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	CLLASTYLAR	C(UniMod:4)LLASTYLAR	2	C(UniMod:4)LLASTYLAR2	35682.8	50955.8	44699.7
Q9JJH5	O35552;P07953;Q9JJH5;P25114	F262_RAT	Pfkfb2	6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2	0	CLLAYFLDK	C(UniMod:4)LLAYFLDK	2	C(UniMod:4)LLAYFLDK2	5779.78	2364.9	1035.84
A0A8I6AD03	A0A8I6AD03	A0A8I6AD03_RAT	Aplp1	Amyloid beta precursor like protein 1	1	CLLDPQR	C(UniMod:4)LLDPQR	2	C(UniMod:4)LLDPQR2	19264.4	24433.2	16050.7
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	CLLDRVPEEEKETNVQVLMVLGAGR	C(UniMod:4)LLDRVPEEEKETNVQVLMVLGAGR	4	C(UniMod:4)LLDRVPEEEKETNVQVLMVLGAGR4	7917.19	12284.3	15679.1
A0A0G2JUU7	A0A0G2JUU7	A0A0G2JUU7_RAT	Tubgcp3	Gamma-tubulin complex component	1	CLLDSNSR	C(UniMod:4)LLDSNSR	2	C(UniMod:4)LLDSNSR2	8381.89	15040.8	10082.3
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	CLLEQFKPCHGLSAPENGAR	C(UniMod:4)LLEQFKPC(UniMod:4)HGLSAPENGAR	4	C(UniMod:4)LLEQFKPC(UniMod:4)HGLSAPENGAR4	22585.8	39455.3	33082.3
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	CLLFSFLAVSPTK	C(UniMod:4)LLFSFLAVSPTK	2	C(UniMod:4)LLFSFLAVSPTK2	61951.1	83816.8	61666.1
A0A0G2KAF4	A0A0G2KAF4	A0A0G2KAF4_RAT	Nfxl1	Nuclear transcription factor, X-box binding-like 1	1	CLLLCHPGPCPPCPK	C(UniMod:4)LLLC(UniMod:4)HPGPC(UniMod:4)PPC(UniMod:4)PK	3	C(UniMod:4)LLLC(UniMod:4)HPGPC(UniMod:4)PPC(UniMod:4)PK3	10284.7	6106.2	
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	CLLLGAGTLGCNVAR	C(UniMod:4)LLLGAGTLGC(UniMod:4)NVAR	2	C(UniMod:4)LLLGAGTLGC(UniMod:4)NVAR2	32361.9	34394.8	28431.1
A0A8I5ZSU2	A0A8I5ZSU2	A0A8I5ZSU2_RAT	Ccm2l	CCM2 like scaffold protein	1	CLLLTWR	C(UniMod:4)LLLTWR	2	C(UniMod:4)LLLTWR2	6999.55	4812.08	6980.83
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	CLLNKPEK	C(UniMod:4)LLNKPEK	2	C(UniMod:4)LLNKPEK2	11413	10935.8	8399.64
A0A0G2JST1	A0A0G2JST1	A0A0G2JST1_RAT	Adgrg6	Adhesion G protein-coupled receptor G6	1	CLLNNALPVK	C(UniMod:4)LLNNALPVK	2	C(UniMod:4)LLNNALPVK2	22421.8	16061.8	16457.8
P97521	P97521	MCAT_RAT	Slc25a20	Mitochondrial carnitine/acylcarnitine carrier protein	1	CLLQIQASSGK	C(UniMod:4)LLQIQASSGK	2	C(UniMod:4)LLQIQASSGK2	80313.4	112554	123313
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	CLLVLHLEVRVHCFHYLIPLAK	C(UniMod:4)LLVLHLEVRVHC(UniMod:4)FHYLIPLAK	3	C(UniMod:4)LLVLHLEVRVHC(UniMod:4)FHYLIPLAK3	4881.93		6275.76
Q6MG56	Q6MG56	LY66F_RAT	Ly6g6f	Lymphocyte antigen 6 complex locus protein G6f	1	CLMPQNK	C(UniMod:4)LMPQNK	1	C(UniMod:4)LMPQNK1	23255.2	25105.3	23467.3
Q6MG56	Q6MG56	LY66F_RAT	Ly6g6f	Lymphocyte antigen 6 complex locus protein G6f	1	CLMPQNK	C(UniMod:4)LMPQNK	2	C(UniMod:4)LMPQNK2	632598	643588	653343
Q6MG56	Q6MG56	LY66F_RAT	Ly6g6f	Lymphocyte antigen 6 complex locus protein G6f	1	CLMPQNKR	C(UniMod:4)LMPQNKR	2	C(UniMod:4)LMPQNKR2		3823.75	6880.75
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	CLMQNDLK	C(UniMod:4)LMQNDLK	2	C(UniMod:4)LMQNDLK2	55240.8	57882.5	68034.2
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	CLMQQGIK	C(UniMod:4)LMQQGIK	1	C(UniMod:4)LMQQGIK1	5933.61	4937.47	6091.57
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	CLMQQGIK	C(UniMod:4)LMQQGIK	2	C(UniMod:4)LMQQGIK2	1.11604e+06	1.10649e+06	1.16454e+06
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	CLMSPENSDPQFHLEHR	C(UniMod:4)LMSPENSDPQFHLEHR	3	C(UniMod:4)LMSPENSDPQFHLEHR3	54333.1	43205.6	34147.7
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	CLMSPENSDPQFHLEHR	C(UniMod:4)LMSPENSDPQFHLEHR	4	C(UniMod:4)LMSPENSDPQFHLEHR4	99722.7	55539.2	92128.5
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	CLNALITTLGPELQGNNTSVSALR	C(UniMod:4)LNALITTLGPELQGNNTSVSALR	3	C(UniMod:4)LNALITTLGPELQGNNTSVSALR3	13192.6	11454	
F1M625	F1M625	UBP46_RAT	Usp46	Ubiquitin carboxyl-terminal hydrolase 46	1	CLNCETVSSK	C(UniMod:4)LNC(UniMod:4)ETVSSK	2	C(UniMod:4)LNC(UniMod:4)ETVSSK2	9766.86	6763.4	4504.7
Q3ZAU6	Q3ZAU6	Q3ZAU6_RAT	Rnf14	RBR-type E3 ubiquitin transferase	1	CLNCPEPQCSSVATPGQVK	C(UniMod:4)LNC(UniMod:4)PEPQC(UniMod:4)SSVATPGQVK	3	C(UniMod:4)LNC(UniMod:4)PEPQC(UniMod:4)SSVATPGQVK3	18211.6	17023.3	11536.5
Q02769	Q02769	FDFT_RAT	Fdft1	Squalene synthase	1	CLNELITNALQHIPDVITYLSR	C(UniMod:4)LNELITNALQHIPDVITYLSR	3	C(UniMod:4)LNELITNALQHIPDVITYLSR3	1474.58		
Q3B7U9	Q3B7U9	FKBP8_RAT	Fkbp8	Peptidyl-prolyl cis-trans isomerase FKBP8	1	CLNNLAASQLK	C(UniMod:4)LNNLAASQLK	2	C(UniMod:4)LNNLAASQLK2	12645.9	10057.1	12194.4
F1M471	F1M471	F1M471_RAT	Epm2aip1	EPM2A interacting protein 1	1	CLNNWLR	C(UniMod:4)LNNWLR	2	C(UniMod:4)LNNWLR2		281690	
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	CLNPALGNLTALTYLNLSR	C(UniMod:4)LNPALGNLTALTYLNLSR	3	C(UniMod:4)LNPALGNLTALTYLNLSR3	8496.44	12235.8	
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	CLNSNQFHFVHAGSCQEGPQLEWGLER	C(UniMod:4)LNSNQFHFVHAGSC(UniMod:4)QEGPQLEWGLER	4	C(UniMod:4)LNSNQFHFVHAGSC(UniMod:4)QEGPQLEWGLER4	39955.9	39392.4	33679.4
D3ZZC5	D3ZZC5	D3ZZC5_RAT	Tradd	Tumor necrosis factor receptor type 1-associated DEATH domain protein	1	CLNYILAQKPDR	C(UniMod:4)LNYILAQKPDR	3	C(UniMod:4)LNYILAQKPDR3	17014.9	9591.7	10668.1
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	CLPFFNDR	C(UniMod:4)LPFFNDR	2	C(UniMod:4)LPFFNDR2	23727.7	21371.1	24564.4
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	CLPFFNDRPWR	C(UniMod:4)LPFFNDRPWR	3	C(UniMod:4)LPFFNDRPWR3	310222	343662	353627
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	CLPGFAGER	C(UniMod:4)LPGFAGER	2	C(UniMod:4)LPGFAGER2	97907	101819	91244.7
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CLPGFLGDR	C(UniMod:4)LPGFLGDR	2	C(UniMod:4)LPGFLGDR2	102718	82585.3	105684
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	CLPGLHPIFK	C(UniMod:4)LPGLHPIFK	2	C(UniMod:4)LPGLHPIFK2	139789	102736	95768.7
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	CLPGLHPIFK	C(UniMod:4)LPGLHPIFK	3	C(UniMod:4)LPGLHPIFK3	624028	599372	628000
Q8CHI9	Q8CHI9	CHSTF_RAT	Chst15	Carbohydrate sulfotransferase 15	1	CLPHFYIIGQPK	C(UniMod:4)LPHFYIIGQPK	2	C(UniMod:4)LPHFYIIGQPK2			1985.06
Q8CHI9	Q8CHI9	CHSTF_RAT	Chst15	Carbohydrate sulfotransferase 15	1	CLPHFYIIGQPK	C(UniMod:4)LPHFYIIGQPK	3	C(UniMod:4)LPHFYIIGQPK3	16670.2	15007.3	9891.8
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	CLPHIVPNVLLAK	C(UniMod:4)LPHIVPNVLLAK	3	C(UniMod:4)LPHIVPNVLLAK3	13616.8	16071.7	12976.9
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	CLPIELNPHSFDSPHTK	C(UniMod:4)LPIELNPHSFDSPHTK	4	C(UniMod:4)LPIELNPHSFDSPHTK4	5829.66	1867.19	
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	CLPLEETQAVLQLGIEGAPQSLSIK	C(UniMod:4)LPLEETQAVLQLGIEGAPQSLSIK	3	C(UniMod:4)LPLEETQAVLQLGIEGAPQSLSIK3	5868.33	9342.59	7163.56
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	CLPQQIVFYIGHGELGHPAILVSK	C(UniMod:4)LPQQIVFYIGHGELGHPAILVSK	4	C(UniMod:4)LPQQIVFYIGHGELGHPAILVSK4		6004.96	4692.85
P98105	P98105	LYAM2_RAT	Sele	E-selectin	1	CLPSASAPFQSGSSCK	C(UniMod:4)LPSASAPFQSGSSC(UniMod:4)K	2	C(UniMod:4)LPSASAPFQSGSSC(UniMod:4)K2	26408.1	21205	24924.9
A0A8I6AEI3	A0A8I6AEI3	A0A8I6AEI3_RAT	Wwox	WW domain-containing oxidoreductase	1	CLPSEEAQNEETAR	C(UniMod:4)LPSEEAQNEETAR	2	C(UniMod:4)LPSEEAQNEETAR2	13950.4	10253.2	8615.1
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	CLPVCGK	C(UniMod:4)LPVC(UniMod:4)GK	1	C(UniMod:4)LPVC(UniMod:4)GK1	13520.9	5746.06	9242.15
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	CLPVCGK	C(UniMod:4)LPVC(UniMod:4)GK	2	C(UniMod:4)LPVC(UniMod:4)GK2	714425	430688	342720
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	CLPVTELENGR	C(UniMod:4)LPVTELENGR	2	C(UniMod:4)LPVTELENGR2	235454	218278	194528
Q5RJS8	Q5RJS8	TPST2_RAT	Tpst2	Protein-tyrosine sulfotransferase 2	1	CLPVYYEQLVLHPR	C(UniMod:4)LPVYYEQLVLHPR	3	C(UniMod:4)LPVYYEQLVLHPR3	2428	2225.1	1924.28
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	CLQALSAVSTHPDIVK	C(UniMod:4)LQALSAVSTHPDIVK	3	C(UniMod:4)LQALSAVSTHPDIVK3	3105.45	7066.38	3982.59
A0A0G2K2W2	A0A0G2K2W2	A0A0G2K2W2_RAT	Cmc4	Uncharacterized protein	1	CLQANNYSESR	C(UniMod:4)LQANNYSESR	2	C(UniMod:4)LQANNYSESR2	2809.75	2305.93	2932.76
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	CLQCSDMDLCK	C(UniMod:4)LQC(UniMod:4)SDMDLC(UniMod:4)K	2	C(UniMod:4)LQC(UniMod:4)SDMDLC(UniMod:4)K2	20551.6	14586.4	18571.4
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	CLQDGTGDVSFVR	C(UniMod:4)LQDGTGDVSFVR	2	C(UniMod:4)LQDGTGDVSFVR2	94209.2	96413.1	102868
Q6AY97	Q6AY97	CCD91_RAT	Ccdc91	Coiled-coil domain-containing protein 91	1	CLQEEMQK	C(UniMod:4)LQEEMQK	2	C(UniMod:4)LQEEMQK2	7506.05	5752.33	7501.56
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CLQGACVVNK	C(UniMod:4)LQGAC(UniMod:4)VVNK	2	C(UniMod:4)LQGAC(UniMod:4)VVNK2	40261.7	34005.2	31974.6
D3ZM21	D3ZM21	D3ZM21_RAT	Comtd1	Catechol-O-methyltransferase domain containing 1	1	CLQLLRPGGVLAVLR	C(UniMod:4)LQLLRPGGVLAVLR	3	C(UniMod:4)LQLLRPGGVLAVLR3	24140.5	21307.9	27783.3
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	CLQLPCLR	C(UniMod:4)LQLPC(UniMod:4)LR	2	C(UniMod:4)LQLPC(UniMod:4)LR2	23357	20359.8	17317.4
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	CLQNGVLFQDDAFPPVSHSLGFK	C(UniMod:4)LQNGVLFQDDAFPPVSHSLGFK	3	C(UniMod:4)LQNGVLFQDDAFPPVSHSLGFK3	127329	119264	129524
A0A0G2K7U7	A0A0G2K7U7	A0A0G2K7U7_RAT	Ankrd27	Ankyrin repeat domain 27	1	CLQQLLR	C(UniMod:4)LQQLLR	2	C(UniMod:4)LQQLLR2	8809.01	5537.66	2854.27
A0A8I6GAD6	A0A8I6GAD6	A0A8I6GAD6_RAT	Nrbp1	Nuclear receptor binding protein 1	1	CLQSEPAR	C(UniMod:4)LQSEPAR	2	C(UniMod:4)LQSEPAR2	161710	151994	
G3V6U9	G3V6U9	SETD3_RAT	Setd3	Actin-histidine N-methyltransferase	1	CLQSTQAIHDVFSQYK	C(UniMod:4)LQSTQAIHDVFSQYK	3	C(UniMod:4)LQSTQAIHDVFSQYK3	11240.9	11294.2	
Q63484	P47196;P47197;Q63484	AKT3_RAT	Akt3	RAC-gamma serine/threonine-protein kinase	0	CLQWTTVIER	C(UniMod:4)LQWTTVIER	2	C(UniMod:4)LQWTTVIER2	12810.3	13801.8	8350.05
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	CLRDGGGDVAFVK	C(UniMod:4)LRDGGGDVAFVK	3	C(UniMod:4)LRDGGGDVAFVK3		10122.5	9031.17
Q63584	Q63584	TMEDA_RAT	Tmed10	Transmembrane emp24 domain-containing protein 10	1	CLREEIHK	C(UniMod:4)LREEIHK	2	C(UniMod:4)LREEIHK2	13225.3	11462.2	11081.1
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	CLRGEEETVTTLDYSHCSLEQVPK	C(UniMod:4)LRGEEETVTTLDYSHC(UniMod:4)SLEQVPK	4	C(UniMod:4)LRGEEETVTTLDYSHC(UniMod:4)SLEQVPK4	32897.2	38848.6	51506
P14046	Q6IE52;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	CLRNKVHLSFSPSQSLPASQTHMR	C(UniMod:4)LRNKVHLSFSPSQSLPASQTHMR	4	C(UniMod:4)LRNKVHLSFSPSQSLPASQTHMR4	17948.5	19593.1	15902.1
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	CLSAAEEK	C(UniMod:4)LSAAEEK	1	C(UniMod:4)LSAAEEK1	25232.6	24883	
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	CLSAAEEK	C(UniMod:4)LSAAEEK	2	C(UniMod:4)LSAAEEK2	4.58419e+06	4.63244e+06	
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	CLSDGCDTR	C(UniMod:4)LSDGC(UniMod:4)DTR	2	C(UniMod:4)LSDGC(UniMod:4)DTR2	23701.8	21367.4	23986.2
P26431	P26431	SL9A1_RAT	Slc9a1	Sodium/hydrogen exchanger 1	1	CLSDPGPHPEPGEGEPFIPK	C(UniMod:4)LSDPGPHPEPGEGEPFIPK	3	C(UniMod:4)LSDPGPHPEPGEGEPFIPK3	173282	171377	193888
Q7TSU1	D4A631;Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	0	CLSEFACNAAFPDTSMEAIR	C(UniMod:4)LSEFAC(UniMod:4)NAAFPDTSMEAIR	3	C(UniMod:4)LSEFAC(UniMod:4)NAAFPDTSMEAIR3	16667.6	16397.4	17149.6
Q5PQX1	Q5PQX1	TOIP1_RAT	Tor1aip1	Torsin-1A-interacting protein 1	1	CLSEQIADAYSSFR	C(UniMod:4)LSEQIADAYSSFR	2	C(UniMod:4)LSEQIADAYSSFR2	1467.44	4493.11	3596.92
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	CLSESELIGELSADFVQPTYQEKPSMPAAK	C(UniMod:4)LSESELIGELSADFVQPTYQEKPSMPAAK	4	C(UniMod:4)LSESELIGELSADFVQPTYQEKPSMPAAK4	4847.48	5089.83	
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	CLSFECPENYR	C(UniMod:4)LSFEC(UniMod:4)PENYR	2	C(UniMod:4)LSFEC(UniMod:4)PENYR2	577727	290608	245157
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	CLSFECPENYRR	C(UniMod:4)LSFEC(UniMod:4)PENYRR	2	C(UniMod:4)LSFEC(UniMod:4)PENYRR2	4122.94	6352.94	4596.5
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	CLSFECPENYRR	C(UniMod:4)LSFEC(UniMod:4)PENYRR	3	C(UniMod:4)LSFEC(UniMod:4)PENYRR3	1.2929e+06	1.03602e+06	1.02209e+06
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	CLSPDDSTVK	C(UniMod:4)LSPDDSTVK	2	C(UniMod:4)LSPDDSTVK2	18295	12307.7	13111.5
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	CLSQEVK	C(UniMod:4)LSQEVK	2	C(UniMod:4)LSQEVK2	18364.5	32845.3	42095.5
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	CLSSGAWDDVIPTCK	C(UniMod:4)LSSGAWDDVIPTC(UniMod:4)K	2	C(UniMod:4)LSSGAWDDVIPTC(UniMod:4)K2	46161	56083.2	33733.4
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	CLSSLKEER	C(UniMod:4)LSSLKEER	2	C(UniMod:4)LSSLKEER2	313529	168686	270024
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CLSSSLR	C(UniMod:4)LSSSLR	2	C(UniMod:4)LSSSLR2	281325	335738	284921
D3ZSN4	D3ZSN4	D3ZSN4_RAT	Zfp330	Zinc finger protein 330	1	CLSTHACACPLTDAECVECER	C(UniMod:4)LSTHAC(UniMod:4)AC(UniMod:4)PLTDAEC(UniMod:4)VEC(UniMod:4)ER	3	C(UniMod:4)LSTHAC(UniMod:4)AC(UniMod:4)PLTDAEC(UniMod:4)VEC(UniMod:4)ER3	5693.98	12670.2	5228.85
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	CLSYGDTSQLR	C(UniMod:4)LSYGDTSQLR	2	C(UniMod:4)LSYGDTSQLR2	5251.87		7638.27
Q6P752	Q6P752	TOIP2_RAT	Tor1aip2	Torsin-1A-interacting protein 2	1	CLSYHVANAYTSSQK	C(UniMod:4)LSYHVANAYTSSQK	3	C(UniMod:4)LSYHVANAYTSSQK3	8752.36	5155.91	9620.11
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	CLTADGHYLYTTNSAGR	C(UniMod:4)LTADGHYLYTTNSAGR	3	C(UniMod:4)LTADGHYLYTTNSAGR3	3341.77	7434.43	4908.58
A0A8I6A8N5;D0RB01	A0A8I6A8N5;D0RB01	A0A8I6A8N5_RAT;D0RB01_RAT	RGD1561481;Usp12	ubiquitinyl hydrolase 1	0	CLTCETISSK	C(UniMod:4)LTC(UniMod:4)ETISSK	2	C(UniMod:4)LTC(UniMod:4)ETISSK2	798.161		2897.95
Q9EPF2	Q9EPF2	MUC18_RAT	Mcam	Cell surface glycoprotein MUC18	1	CLTDGNPQPHFTINK	C(UniMod:4)LTDGNPQPHFTINK	3	C(UniMod:4)LTDGNPQPHFTINK3	26943.8	13504.2	19267.6
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	CLTGLAVGLR	C(UniMod:4)LTGLAVGLR	2	C(UniMod:4)LTGLAVGLR2	14129.4	15698.7	14342.1
D4A769	D4A769	D4A769_RAT	Samd4b	Sterile alpha motif domain containing 4B	1	CLTHEAFTETQK	C(UniMod:4)LTHEAFTETQK	3	C(UniMod:4)LTHEAFTETQK3	2933.47	1485.66	
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	CLTKLPEGTTYEEYLGAEYLQAVGNIRK	C(UniMod:4)LTKLPEGTTYEEYLGAEYLQAVGNIRK	4	C(UniMod:4)LTKLPEGTTYEEYLGAEYLQAVGNIRK4	4703.56	6504.43	7378.66
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	CLTLLVEIHPVNNVTVLK	C(UniMod:4)LTLLVEIHPVNNVTVLK	3	C(UniMod:4)LTLLVEIHPVNNVTVLK3	3789.59	5566.25	6106.54
Q32KJ6	Q32KJ6	GALNS_RAT	Galns	N-acetylgalactosamine-6-sulfatase	1	CLTPPESVPEK	C(UniMod:4)LTPPESVPEK	2	C(UniMod:4)LTPPESVPEK2	59782.9	44161.8	64441.6
A0A0U1RRV5	A0A0U1RRV5	A0A0U1RRV5_RAT	Cluh	Clustered mitochondria protein homolog	1	CLTQQAVALQR	C(UniMod:4)LTQQAVALQR	2	C(UniMod:4)LTQQAVALQR2		1522.93	
A0A8I5Y9M9	A0A8I5Y9M9	A0A8I5Y9M9_RAT	Sri	Sorcin	1	CLTQSGIAGGYK	C(UniMod:4)LTQSGIAGGYK	2	C(UniMod:4)LTQSGIAGGYK2	3411.37	888.799	1254.46
A0A8I5Y9M9	A0A8I5Y9M9	A0A8I5Y9M9_RAT	Sri	Sorcin	1	CLTQSGIAGGYKPFNLETCR	C(UniMod:4)LTQSGIAGGYKPFNLETC(UniMod:4)R	3	C(UniMod:4)LTQSGIAGGYKPFNLETC(UniMod:4)R3	58200.8	53371.5	70688.1
D3ZYI0	D3ZYI0	D3ZYI0_RAT	Gca	Grancalcin	1	CLTQSGISGSYAPFSLETCR	C(UniMod:4)LTQSGISGSYAPFSLETC(UniMod:4)R	3	C(UniMod:4)LTQSGISGSYAPFSLETC(UniMod:4)R3	3309.05	6616.53	
Q5HZW5	Q5HZW5	CD320_RAT	Cd320	CD320 antigen	1	CLTSGYCVPLSWR	C(UniMod:4)LTSGYC(UniMod:4)VPLSWR	2	C(UniMod:4)LTSGYC(UniMod:4)VPLSWR2	34821.9	39875.2	28252.8
B5DF65	B5DF65	B5DF65_RAT	Blvrb	Biliverdin reductase B	1	CLTTHEYDGQK	C(UniMod:4)LTTHEYDGQK	3	C(UniMod:4)LTTHEYDGQK3		5028.5	3292.24
A0A8I6AS77	A0A8I6AS77	A0A8I6AS77_RAT	Ly6g6c	Lymphocyte antigen 6 family member G6C	1	CLTTNVYLGK	C(UniMod:4)LTTNVYLGK	2	C(UniMod:4)LTTNVYLGK2	16924.3	10235.5	15357.6
B0BN72	B0BN72	MCRI1_RAT	Mcrip1	Mapk-regulated corepressor-interacting protein 1	1	CLVEEYVEK	C(UniMod:4)LVEEYVEK	2	C(UniMod:4)LVEEYVEK2	11052.2	8775.71	11800.9
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	CLVETLALAPHEEYIQR	C(UniMod:4)LVETLALAPHEEYIQR	3	C(UniMod:4)LVETLALAPHEEYIQR3	26916.2	18426.5	15057.7
D3ZRH1	D3ZRH1	D3ZRH1_RAT	Oxa1l	OXA1L, mitochondrial inner membrane protein	1	CLVFPLIVK	C(UniMod:4)LVFPLIVK	2	C(UniMod:4)LVFPLIVK2	4192.48	1834.02	2032.71
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	CLVGEFVSDALLVPDK	C(UniMod:4)LVGEFVSDALLVPDK	2	C(UniMod:4)LVGEFVSDALLVPDK2	59825.1	36196.5	50339.7
P15943	P15943	APLP2_RAT	Aplp2	Amyloid beta precursor like protein 2	1	CLVGEFVSDVLLVPENCQFFHQER	C(UniMod:4)LVGEFVSDVLLVPENC(UniMod:4)QFFHQER	3	C(UniMod:4)LVGEFVSDVLLVPENC(UniMod:4)QFFHQER3	11709.2	8017.19	9756.27
Q3MIE4	Q3MIE4	VAT1_RAT	Vat1	Synaptic vesicle membrane protein VAT-1 homolog	1	CLVLTGFGGYDK	C(UniMod:4)LVLTGFGGYDK	2	C(UniMod:4)LVLTGFGGYDK2	75197.5	71844.8	88210.1
P12368	P12368	KAP2_RAT	Prkar2a	cAMP-dependent protein kinase type II-alpha regulatory subunit	1	CLVMDVQAFER	C(UniMod:4)LVMDVQAFER	2	C(UniMod:4)LVMDVQAFER2	7338.84	8185.5	4235.49
Q02353	Q02353	NDST1_RAT	Ndst1	Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1	1	CLVPGWYATHIER	C(UniMod:4)LVPGWYATHIER	3	C(UniMod:4)LVPGWYATHIER3	3366.94	1639.57	
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	CLVSMTTPHDIR	C(UniMod:4)LVSMTTPHDIR	3	C(UniMod:4)LVSMTTPHDIR3	11714.6	9392.35	5406.77
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	CLVTEDTQR	C(UniMod:4)LVTEDTQR	2	C(UniMod:4)LVTEDTQR2	109646	84702.7	100838
P98087	P98087	CBLN2_RAT	Cbln2	Cerebellin-2	1	CLVVCDSSPSGDGAVTSSLGISVR	C(UniMod:4)LVVC(UniMod:4)DSSPSGDGAVTSSLGISVR	3	C(UniMod:4)LVVC(UniMod:4)DSSPSGDGAVTSSLGISVR3	2348	3365.4	8045.31
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	CLVVGAGPCGLR	C(UniMod:4)LVVGAGPC(UniMod:4)GLR	2	C(UniMod:4)LVVGAGPC(UniMod:4)GLR2	18636.3	16261.3	18284.1
A0A8J8YPH6	A0A8J8YPH6	A0A8J8YPH6_RAT	Hps4	HPS4, biogenesis of lysosomal organelles complex 3 subunit 2	1	CLWDLSGTPPMLIR	C(UniMod:4)LWDLSGTPPMLIR	2	C(UniMod:4)LWDLSGTPPMLIR2	9275.53	15330.4	12024.7
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	CLWDTQSSR	C(UniMod:4)LWDTQSSR	2	C(UniMod:4)LWDTQSSR2	52628.9	40191.5	53344.1
Q8CIZ5	F1LVL9;Q8CIZ5	DMBT1_RAT	Dmbt1	Deleted in malignant brain tumors 1 protein	0	CLWNIEVPNNYR	C(UniMod:4)LWNIEVPNNYR	2	C(UniMod:4)LWNIEVPNNYR2	668382	904201	748761
Q8CIZ5	F1LVL9;Q8CIZ5	DMBT1_RAT	Dmbt1	Deleted in malignant brain tumors 1 protein	0	CLWNIEVPNNYR	C(UniMod:4)LWNIEVPNNYR	3	C(UniMod:4)LWNIEVPNNYR3	76537.4	98505	93077.8
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	CLYASVLTAQPR	C(UniMod:4)LYASVLTAQPR	2	C(UniMod:4)LYASVLTAQPR2	44376.8	52669.1	36857.6
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	CLYLIGR	C(UniMod:4)LYLIGR	2	C(UniMod:4)LYLIGR2	71749.9	73388.5	57313.2
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	CLYVFPAK	C(UniMod:4)LYVFPAK	2	C(UniMod:4)LYVFPAK2	370192	424197	489219
D3ZZC5	D3ZZC5	D3ZZC5_RAT	Tradd	Tumor necrosis factor receptor type 1-associated DEATH domain protein	1	CMAAALAQEAVR	C(UniMod:4)MAAALAQEAVR	2	C(UniMod:4)MAAALAQEAVR2	4591.22		6496.95
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	CMAALISSRPDLLPDFHCTLAPALIR	C(UniMod:4)MAALISSRPDLLPDFHC(UniMod:4)TLAPALIR	4	C(UniMod:4)MAALISSRPDLLPDFHC(UniMod:4)TLAPALIR4	3756.67	2847.33	5027.23
B2RYW8	B2RYW8	MIC10_RAT	Micos10	MICOS complex subunit Mic10	1	CMADALVK	C(UniMod:4)MADALVK	2	C(UniMod:4)MADALVK2	84098.2	90292.5	113147
Q02253	Q02253	MMSA_RAT	Aldh6a1	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial	1	CMALSTAVLVGEAK	C(UniMod:4)MALSTAVLVGEAK	2	C(UniMod:4)MALSTAVLVGEAK2	20904.6	24924.1	8652.44
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	CMAPPSASCLGDGQLESLAGEPELELK	C(UniMod:4)MAPPSASC(UniMod:4)LGDGQLESLAGEPELELK	3	C(UniMod:4)MAPPSASC(UniMod:4)LGDGQLESLAGEPELELK3	7778.94	11794.5	10568.8
Q9WVH8	Q9WVH8	FBLN5_RAT	Fbln5	Fibulin-5	1	CMCPAENTGCR	C(UniMod:4)MC(UniMod:4)PAENTGC(UniMod:4)R	2	C(UniMod:4)MC(UniMod:4)PAENTGC(UniMod:4)R2	1.12923e+06	897333	774126
Q9WVH8	Q9WVH8	FBLN5_RAT	Fbln5	Fibulin-5	1	CMCPAENTGCRDQPFTILFR	C(UniMod:4)MC(UniMod:4)PAENTGC(UniMod:4)RDQPFTILFR	3	C(UniMod:4)MC(UniMod:4)PAENTGC(UniMod:4)RDQPFTILFR3	5620.71		3889.66
D3ZRI9	D3ZRI9	D3ZRI9_RAT	Gan	Gigaxonin	1	CMCPLYDPNR	C(UniMod:4)MC(UniMod:4)PLYDPNR	2	C(UniMod:4)MC(UniMod:4)PLYDPNR2	19844.1	19950.7	19078
P23785	P23785	GRN_RAT	Grn	Progranulin	1	CMDEGYCQK	C(UniMod:4)MDEGYC(UniMod:4)QK	2	C(UniMod:4)MDEGYC(UniMod:4)QK2	175266	176126	165576
P67874	P67874	CSK2B_RAT	Csnk2b	Casein kinase II subunit beta	1	CMDVYTPK	C(UniMod:4)MDVYTPK	2	C(UniMod:4)MDVYTPK2	98815.6	82829.5	92057
D3ZL11	D3ZL11	D3ZL11_RAT	Rbsn	Rabenosyn, RAB effector	1	CMELIGLPLANK	C(UniMod:4)MELIGLPLANK	2	C(UniMod:4)MELIGLPLANK2	5202.73	4192.75	1279.77
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	CMGHSSFITHLDWSK	C(UniMod:4)MGHSSFITHLDWSK	4	C(UniMod:4)MGHSSFITHLDWSK4		5800.35	
B2GV97	B2GV97	B2GV97_RAT	Sepsecs	O-phosphoseryl-tRNA(Sec) selenium transferase	1	CMHLIQQGAR	C(UniMod:4)MHLIQQGAR	3	C(UniMod:4)MHLIQQGAR3	6750.76	6311.99	8716.41
A0A8I5ZX76	A0A8I5ZX76	A0A8I5ZX76_RAT	Eif3k	Eukaryotic translation initiation factor 3 subunit K	1	CMIDQAHQEERPIR	C(UniMod:4)MIDQAHQEERPIR	3	C(UniMod:4)MIDQAHQEERPIR3	37449.5	42530.1	28560.4
A0A8I5ZX76	A0A8I5ZX76	A0A8I5ZX76_RAT	Eif3k	Eukaryotic translation initiation factor 3 subunit K	1	CMIDQAHQEERPIR	C(UniMod:4)MIDQAHQEERPIR	4	C(UniMod:4)MIDQAHQEERPIR4	72370.5	73231.1	49610.4
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	CMKPCEFPQIK	C(UniMod:4)MKPC(UniMod:4)EFPQIK	2	C(UniMod:4)MKPC(UniMod:4)EFPQIK2	74051.2	51520.2	50467.9
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	CMKPCEFPQIK	C(UniMod:4)MKPC(UniMod:4)EFPQIK	3	C(UniMod:4)MKPC(UniMod:4)EFPQIK3	381564	307434	301847
A0A0G2K687	A0A0G2K687	A0A0G2K687_RAT	Rubcn	Rubicon autophagy regulator	1	CMLCQAK	C(UniMod:4)MLC(UniMod:4)QAK	2	C(UniMod:4)MLC(UniMod:4)QAK2	4546.53	8817.33	7044.15
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	CMLDRDEDMLITGGR	C(UniMod:4)MLDRDEDMLITGGR	3	C(UniMod:4)MLDRDEDMLITGGR3	71231.7	67677.5	72148.8
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	CMLEGTK	C(UniMod:4)MLEGTK	1	C(UniMod:4)MLEGTK1		2275.86	1669.26
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	CMLEGTK	C(UniMod:4)MLEGTK	2	C(UniMod:4)MLEGTK2	138403	166130	171304
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	CMLEGTKK	C(UniMod:4)MLEGTKK	2	C(UniMod:4)MLEGTKK2		60901.2	
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	CMMAQYNR	C(UniMod:4)MMAQYNR	2	C(UniMod:4)MMAQYNR2	61241.8	51522.6	47707.9
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	CMMDTDDEVR	C(UniMod:4)MMDTDDEVR	2	C(UniMod:4)MMDTDDEVR2	4080.12	7070.44	3228.54
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	CMMDTDDEVRDR	C(UniMod:4)MMDTDDEVRDR	3	C(UniMod:4)MMDTDDEVRDR3	94761	104676	90698.2
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	CMMLTNVQMLNKEPEDMITGER	C(UniMod:4)MMLTNVQMLNKEPEDMITGER	3	C(UniMod:4)MMLTNVQMLNKEPEDMITGER3	21937.4	32981.8	19020
P11232	P11232	THIO_RAT	Txn	Thioredoxin	1	CMPTFQFYK	C(UniMod:4)MPTFQFYK	2	C(UniMod:4)MPTFQFYK2	396860	299809	355969
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	CMQGMDPITR	C(UniMod:4)MQGMDPITR	2	C(UniMod:4)MQGMDPITR2	2950.98	5675.56	2989.37
Q63507	Q6TUH8;A0A8I6G5N0;Q63507	RL14_RAT	Rpl14	Large ribosomal subunit protein eL14	0	CMQLTDFILK	C(UniMod:4)MQLTDFILK	2	C(UniMod:4)MQLTDFILK2	28956.3	30353.9	33034.4
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	CMSDENLPYDLR	C(UniMod:4)MSDENLPYDLR	2	C(UniMod:4)MSDENLPYDLR2	21039.4	20858.1	20069.6
Q6AY23	Q6AY23;D3ZXI0	P5CR2_RAT	Pycr2	Pyrroline-5-carboxylate reductase 2	0	CMTNTPVVVR	C(UniMod:4)MTNTPVVVR	2	C(UniMod:4)MTNTPVVVR2	20330.9	11467.8	25091.6
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	CMTRPEPGVSCDLIGCPLVCGAVFHSCK	C(UniMod:4)MTRPEPGVSC(UniMod:4)DLIGC(UniMod:4)PLVC(UniMod:4)GAVFHSC(UniMod:4)K	4	C(UniMod:4)MTRPEPGVSC(UniMod:4)DLIGC(UniMod:4)PLVC(UniMod:4)GAVFHSC(UniMod:4)K4	4931.86	7261.99	11816.2
Q7TSU1	D4A631;Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	0	CMVEWSK	C(UniMod:4)MVEWSK	2	C(UniMod:4)MVEWSK2	33555.2	27375.7	20219.3
D4ADM2	D4ADM2	D4ADM2_RAT	Pan3	PAN2-PAN3 deadenylation complex subunit PAN3	1	CMVLVDMWK	C(UniMod:4)MVLVDMWK	2	C(UniMod:4)MVLVDMWK2	6041.52	6466.3	8258.78
B0BN30	B0BN30	B0BN30_RAT	Mtch1	Mitochondrial carrier 1	1	CMVQFVGR	C(UniMod:4)MVQFVGR	2	C(UniMod:4)MVQFVGR2	9985.55	16814.8	25394.8
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	CMVTAWSPIGGSLWR	C(UniMod:4)MVTAWSPIGGSLWR	2	C(UniMod:4)MVTAWSPIGGSLWR2	10881.9	4849.74	10557.6
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	CNADPGLSALLSDHR	C(UniMod:4)NADPGLSALLSDHR	2	C(UniMod:4)NADPGLSALLSDHR2	318190	287364	303707
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	CNADPGLSALLSDHR	C(UniMod:4)NADPGLSALLSDHR	3	C(UniMod:4)NADPGLSALLSDHR3	1.6993e+06	1.44913e+06	1.56209e+06
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CNASSQFLCSSGR	C(UniMod:4)NASSQFLC(UniMod:4)SSGR	2	C(UniMod:4)NASSQFLC(UniMod:4)SSGR2	948.493	5203.54	842.66
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	CNAVDHCK	C(UniMod:4)NAVDHC(UniMod:4)K	2	C(UniMod:4)NAVDHC(UniMod:4)K2			2315.94
O88658	O88658	KIF1B_RAT	Kif1b	Kinesin-like protein KIF1B	1	CNAVINEDPNAK	C(UniMod:4)NAVINEDPNAK	2	C(UniMod:4)NAVINEDPNAK2	7548.3	7594.13	9073.68
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	CNCQSHGIPASPK	C(UniMod:4)NC(UniMod:4)QSHGIPASPK	2	C(UniMod:4)NC(UniMod:4)QSHGIPASPK2	40085.5	35134.6	44892.3
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	CNCQSHGIPASPK	C(UniMod:4)NC(UniMod:4)QSHGIPASPK	3	C(UniMod:4)NC(UniMod:4)QSHGIPASPK3	376755	396923	474476
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	CNDMMNLGR	C(UniMod:4)NDMMNLGR	2	C(UniMod:4)NDMMNLGR2	67648.2	67298	72060.1
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	CNDQDTR	C(UniMod:4)NDQDTR	1	C(UniMod:4)NDQDTR1	3227.01	3316.99	10637.3
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	CNDQDTR	C(UniMod:4)NDQDTR	2	C(UniMod:4)NDQDTR2			93407.3
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	CNDQDTRTSYRIGDTWSK	C(UniMod:4)NDQDTRTSYRIGDTWSK	4	C(UniMod:4)NDQDTRTSYRIGDTWSK4	8809.73	5052.06	1426.29
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	CNDTIPEDFQEFQIQTFDR	C(UniMod:4)NDTIPEDFQEFQIQTFDR	3	C(UniMod:4)NDTIPEDFQEFQIQTFDR3	19770.6	19936.9	10631.4
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	CNDTIPEDFQEFQIQTFDRLDN	C(UniMod:4)NDTIPEDFQEFQIQTFDRLDN	3	C(UniMod:4)NDTIPEDFQEFQIQTFDRLDN3	24526.8	11951.3	28700.1
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	CNDTIPEDYER	C(UniMod:4)NDTIPEDYER	2	C(UniMod:4)NDTIPEDYER2	76806	100177	65462.8
A2RUW1	A2RUW1	TOLIP_RAT	Tollip	Toll-interacting protein	1	CNEEDLK	C(UniMod:4)NEEDLK	2	C(UniMod:4)NEEDLK2	5467.89	3926.43	6467.43
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CNEGYEVAPDGR	C(UniMod:4)NEGYEVAPDGR	2	C(UniMod:4)NEGYEVAPDGR2	50168.7	64989	48570.2
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	CNEIISWLDK	C(UniMod:4)NEIISWLDK	2	C(UniMod:4)NEIISWLDK2	133416	117539	105844
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	CNENGGNLATVK	C(UniMod:4)NENGGNLATVK	2	C(UniMod:4)NENGGNLATVK2	316579	235905	298132
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	CNEPAVWSQLAK	C(UniMod:4)NEPAVWSQLAK	2	C(UniMod:4)NEPAVWSQLAK2	1.03614e+06	1.04747e+06	1.20279e+06
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	CNEQPNRVEIYEK	C(UniMod:4)NEQPNRVEIYEK	2	C(UniMod:4)NEQPNRVEIYEK2	4455.22	8845.73	4403.67
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	CNEQPNRVEIYEK	C(UniMod:4)NEQPNRVEIYEK	3	C(UniMod:4)NEQPNRVEIYEK3	87508.6	107816	103034
A0A8I5ZYD8	A0A8I5ZYD8	A0A8I5ZYD8_RAT	Fhl3	Four and a half LIM domains 3	1	CNESLYGR	C(UniMod:4)NESLYGR	2	C(UniMod:4)NESLYGR2	213704	232223	219328
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	CNEVFCFK	C(UniMod:4)NEVFC(UniMod:4)FK	2	C(UniMod:4)NEVFC(UniMod:4)FK2	10388.2	22928.7	16181
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	CNEYYLLK	C(UniMod:4)NEYYLLK	2	C(UniMod:4)NEYYLLK2	12518.5	12102.6	13463.3
D4A1B2	D4A1B2	D4A1B2_RAT	Arpin	Arpin	1	CNFAGDGK	C(UniMod:4)NFAGDGK	2	C(UniMod:4)NFAGDGK2		34541.8	
Q8VHC1	Q8VHC1	Q8VHC1_RAT	Cst6	Cystatin E/M	1	CNFELLEVPWK	C(UniMod:4)NFELLEVPWK	2	C(UniMod:4)NFELLEVPWK2	21458.7	21080.7	15161.1
A0A8I6ARV9	A0A8I6ARV9	A0A8I6ARV9_RAT	Ctsa	Carboxypeptidase	1	CNFYDNKDPDCVNNLQEVSR	C(UniMod:4)NFYDNKDPDC(UniMod:4)VNNLQEVSR	3	C(UniMod:4)NFYDNKDPDC(UniMod:4)VNNLQEVSR3	30107.9	22244.1	18712.4
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	CNGEVDCITGEDESGCEEDK	C(UniMod:4)NGEVDC(UniMod:4)ITGEDESGC(UniMod:4)EEDK	3	C(UniMod:4)NGEVDC(UniMod:4)ITGEDESGC(UniMod:4)EEDK3	310.321	352.582	1725.81
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	CNGEVDCITGEDESGCEEDKK	C(UniMod:4)NGEVDC(UniMod:4)ITGEDESGC(UniMod:4)EEDKK	3	C(UniMod:4)NGEVDC(UniMod:4)ITGEDESGC(UniMod:4)EEDKK3	8649.44	9144.63	12633
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	CNGHASLCNTNTGK	C(UniMod:4)NGHASLC(UniMod:4)NTNTGK	3	C(UniMod:4)NGHASLC(UniMod:4)NTNTGK3			4738.88
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	CNGLLPVWGPHVPESAFATCLAR	C(UniMod:4)NGLLPVWGPHVPESAFATC(UniMod:4)LAR	3	C(UniMod:4)NGLLPVWGPHVPESAFATC(UniMod:4)LAR3	38462.2	23638.4	27063.9
Q62812	F7F0L5;F1LNF0;P02563;P02564;P12847;Q63862;A0A8I6AIQ9;Q9JLT0;Q62812;Q29RW1	MYH9_RAT	Myh9	Myosin-9	0	CNGVLEGIR	C(UniMod:4)NGVLEGIR	2	C(UniMod:4)NGVLEGIR2	6.0344e+06	6.39715e+06	6.51272e+06
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CNHGFILSHNNDCIDVDECATGNGNLCR	C(UniMod:4)NHGFILSHNNDC(UniMod:4)IDVDEC(UniMod:4)ATGNGNLC(UniMod:4)R	4	C(UniMod:4)NHGFILSHNNDC(UniMod:4)IDVDEC(UniMod:4)ATGNGNLC(UniMod:4)R4	1620.28	2489.72	5907.62
P51794	P51794	CLCN4_RAT	Clcn4	H(+)/Cl(-) exchange transporter 4	1	CNIAWCR	C(UniMod:4)NIAWC(UniMod:4)R	2	C(UniMod:4)NIAWC(UniMod:4)R2	9031.27	9738.91	6717.79
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	CNICIEK	C(UniMod:4)NIC(UniMod:4)IEK	2	C(UniMod:4)NIC(UniMod:4)IEK2	15200.9	24581.4	22442.7
Q66H12	Q66H12	NAGAB_RAT	Naga	Alpha-N-acetylgalactosaminidase	1	CNINCEEDPK	C(UniMod:4)NINC(UniMod:4)EEDPK	2	C(UniMod:4)NINC(UniMod:4)EEDPK2	5422.67	7080.32	3777.42
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	CNLACAPPR	C(UniMod:4)NLAC(UniMod:4)APPR	2	C(UniMod:4)NLAC(UniMod:4)APPR2	89828.5	67389.6	63856.5
Q07977	Q07977	SIA8B_RAT	St8sia2	Alpha-2,8-sialyltransferase 8B	1	CNLAPVQEYAR	C(UniMod:4)NLAPVQEYAR	2	C(UniMod:4)NLAPVQEYAR2	19268.7	11376.7	17419.3
A1KQY6	A1KQY6	A1KQY6_RAT	St8sia4	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	1	CNLAPVVEFAADVGTK	C(UniMod:4)NLAPVVEFAADVGTK	2	C(UniMod:4)NLAPVVEFAADVGTK2	15718.3	20060.9	24958
A1KQY6	A1KQY6	A1KQY6_RAT	St8sia4	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	1	CNLAPVVEFAADVGTK	C(UniMod:4)NLAPVVEFAADVGTK	3	C(UniMod:4)NLAPVVEFAADVGTK3	2203.58		3709.69
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CNLDGSELEVIDTMR	C(UniMod:4)NLDGSELEVIDTMR	2	C(UniMod:4)NLDGSELEVIDTMR2	51439.2	57340.7	54774.1
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CNLDGSELEVIDTMR	C(UniMod:4)NLDGSELEVIDTMR	3	C(UniMod:4)NLDGSELEVIDTMR3	19902.9	23493.3	29994.5
A0A0G2K8J8	A0A0G2K8J8	A0A0G2K8J8_RAT	Fam120b	Family with sequence similarity 120B	1	CNLEALTCTYPEVK	C(UniMod:4)NLEALTC(UniMod:4)TYPEVK	2	C(UniMod:4)NLEALTC(UniMod:4)TYPEVK2		15199.3	3296.4
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	CNLLAEK	C(UniMod:4)NLLAEK	1	C(UniMod:4)NLLAEK1	311275	281563	294572
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	CNLLAEK	C(UniMod:4)NLLAEK	2	C(UniMod:4)NLLAEK2	12433.8	16712.4	16384.6
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	CNLLTLQCR	C(UniMod:4)NLLTLQC(UniMod:4)R	2	C(UniMod:4)NLLTLQC(UniMod:4)R2	5645	12585	9691.43
Q6ZXC7	Q6ZXC7	Q6ZXC7_RAT	St8sia6	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6	1	CNLPPITGSASQDVGSK	C(UniMod:4)NLPPITGSASQDVGSK	2	C(UniMod:4)NLPPITGSASQDVGSK2	5331.85	3378.67	6330
D3ZP82	D3ZP82	D3ZP82_RAT	Loxl3	Lysyl oxidase homolog	1	CNLPYTGVETK	C(UniMod:4)NLPYTGVETK	2	C(UniMod:4)NLPYTGVETK2	9129.38		6490.06
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	CNLVPTDEITVYYNAK	C(UniMod:4)NLVPTDEITVYYNAK	2	C(UniMod:4)NLVPTDEITVYYNAK2	28543.4	20720.6	33087.5
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	CNNGNGTFECGVCR	C(UniMod:4)NNGNGTFEC(UniMod:4)GVC(UniMod:4)R	2	C(UniMod:4)NNGNGTFEC(UniMod:4)GVC(UniMod:4)R2	2005.9		
Q8VBX1	Q8VBX1	LIPE_RAT	Lipg	Endothelial lipase	1	CNNIGYNAK	C(UniMod:4)NNIGYNAK	2	C(UniMod:4)NNIGYNAK2	4367.33	1696.89	4649.28
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	CNNSVMAK	C(UniMod:4)NNSVMAK	1	C(UniMod:4)NNSVMAK1	1468.59		701.059
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	CNNSVMAK	C(UniMod:4)NNSVMAK	2	C(UniMod:4)NNSVMAK2	30074.5	24370	27097.7
Q06000	Q06000	LIPL_RAT	Lpl	Lipoprotein lipase	1	CNNVGYEINK	C(UniMod:4)NNVGYEINK	2	C(UniMod:4)NNVGYEINK2	34183.4	32882.1	19744
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	CNPGTGQCVCPTGWVGEQCQHCGGR	C(UniMod:4)NPGTGQC(UniMod:4)VC(UniMod:4)PTGWVGEQC(UniMod:4)QHC(UniMod:4)GGR	3	C(UniMod:4)NPGTGQC(UniMod:4)VC(UniMod:4)PTGWVGEQC(UniMod:4)QHC(UniMod:4)GGR3	4243.41	5943.12	6186.19
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	CNPGYGLLVRPGR	C(UniMod:4)NPGYGLLVRPGR	3	C(UniMod:4)NPGYGLLVRPGR3	23024.4	18655.7	18783.7
P23363	P23363	BDNF_RAT	Bdnf	Brain-derived neurotrophic factor	1	CNPMGYTK	C(UniMod:4)NPMGYTK	2	C(UniMod:4)NPMGYTK2	97784.9	63684.1	80601.3
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	CNQGYELHR	C(UniMod:4)NQGYELHR	2	C(UniMod:4)NQGYELHR2	54228.4	45279.6	35884.8
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	CNQGYELHR	C(UniMod:4)NQGYELHR	3	C(UniMod:4)NQGYELHR3	235396	272255	259002
P14562	P14562	LAMP1_RAT	Lamp1	Lysosome-associated membrane glycoprotein 1	1	CNSEEHIFVSK	C(UniMod:4)NSEEHIFVSK	2	C(UniMod:4)NSEEHIFVSK2	11306	10120.7	12273.6
P14562	P14562	LAMP1_RAT	Lamp1	Lysosome-associated membrane glycoprotein 1	1	CNSEEHIFVSK	C(UniMod:4)NSEEHIFVSK	3	C(UniMod:4)NSEEHIFVSK3	82804.9	75442.1	70635.3
E9PSX8	E9PSX8	E9PSX8_RAT	Sipa1	Signal-induced proliferation-associated 1	1	CNSEPEPGSLSEK	C(UniMod:4)NSEPEPGSLSEK	2	C(UniMod:4)NSEPEPGSLSEK2	2886.9	3998.59	
Q5CZZ9	Q5CZZ9	PI51B_RAT	Pip5k1b	Phosphatidylinositol 4-phosphate 5-kinase type-1 beta	1	CNSIAALK	C(UniMod:4)NSIAALK	2	C(UniMod:4)NSIAALK2	1701.32	1660.71	2060.91
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	CNSLEEIK	C(UniMod:4)NSLEEIK	2	C(UniMod:4)NSLEEIK2	271483	274894	269562
P07867	P07867	LIPC_RAT	Lipc	Hepatic triacylglycerol lipase	1	CNSLGYDIR	C(UniMod:4)NSLGYDIR	2	C(UniMod:4)NSLGYDIR2	94910	126896	102667
P29994	P29994;P29995	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	0	CNSLLPLDDIVR	C(UniMod:4)NSLLPLDDIVR	2	C(UniMod:4)NSLLPLDDIVR2	110813	84516	98739.9
B2RZ78	B2RZ78	VPS29_RAT	Vps29	Vacuolar protein sorting-associated protein 29	1	CNSLPAK	C(UniMod:4)NSLPAK	2	C(UniMod:4)NSLPAK2		28054	
Q08850	Q08850	STX4_RAT	Stx4	Syntaxin-4	1	CNSMQSEYR	C(UniMod:4)NSMQSEYR	2	C(UniMod:4)NSMQSEYR2	17855.5	14057.6	8145.63
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	CNTCGQPITDR	C(UniMod:4)NTC(UniMod:4)GQPITDR	2	C(UniMod:4)NTC(UniMod:4)GQPITDR2	1.13407e+06	1.0632e+06	1.10305e+06
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	CNTTVCLGK	C(UniMod:4)NTTVC(UniMod:4)LGK	2	C(UniMod:4)NTTVC(UniMod:4)LGK2	23262.4	29410.5	21660
G3V7L4	G3V7L4	G3V7L4_RAT	Cdh16	Cadherin 16	1	CNVEGQCMR	C(UniMod:4)NVEGQC(UniMod:4)MR	2	C(UniMod:4)NVEGQC(UniMod:4)MR2	23118.7	27323.1	29431.3
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	CNVENLPR	C(UniMod:4)NVENLPR	2	C(UniMod:4)NVENLPR2	23568.3	15155.3	20135.4
P48548	P48548	KCNJ5_RAT	Kcnj5	G protein-activated inward rectifier potassium channel 4	1	CNVHHGNVQETYR	C(UniMod:4)NVHHGNVQETYR	2	C(UniMod:4)NVHHGNVQETYR2			2037.15
P48548	P48548	KCNJ5_RAT	Kcnj5	G protein-activated inward rectifier potassium channel 4	1	CNVHHGNVQETYR	C(UniMod:4)NVHHGNVQETYR	3	C(UniMod:4)NVHHGNVQETYR3			14336.5
P48548	P48548	KCNJ5_RAT	Kcnj5	G protein-activated inward rectifier potassium channel 4	1	CNVHHGNVQETYR	C(UniMod:4)NVHHGNVQETYR	4	C(UniMod:4)NVHHGNVQETYR4			2962.67
P48500	A0A8I5ZVI4;P48500	TPIS_RAT	Tpi1	Triosephosphate isomerase	0	CNVSEGVAQCTR	C(UniMod:4)NVSEGVAQC(UniMod:4)TR	2	C(UniMod:4)NVSEGVAQC(UniMod:4)TR2	133682	107261	93821.9
Q9QXU8	Q62698;Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	0	CNVWILDGDLYHK	C(UniMod:4)NVWILDGDLYHK	2	C(UniMod:4)NVWILDGDLYHK2	13071.4	23343	15185.2
Q9QXU8	Q62698;Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	0	CNVWILDGDLYHK	C(UniMod:4)NVWILDGDLYHK	3	C(UniMod:4)NVWILDGDLYHK3	67560.7	70222.6	78529
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	CNWSLEVLVVDK	C(UniMod:4)NWSLEVLVVDK	2	C(UniMod:4)NWSLEVLVVDK2	33197.3	36833.9	21340.5
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	CNYLGHYSDPMYR	C(UniMod:4)NYLGHYSDPMYR	2	C(UniMod:4)NYLGHYSDPMYR2	2.19509e+06	2.40988e+06	2.54298e+06
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	CNYLGHYSDPMYR	C(UniMod:4)NYLGHYSDPMYR	3	C(UniMod:4)NYLGHYSDPMYR3	5.56211e+06	22226.1	25350.8
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	CNYNCPHPNEASFR	C(UniMod:4)NYNC(UniMod:4)PHPNEASFR	2	C(UniMod:4)NYNC(UniMod:4)PHPNEASFR2	3613.57	2613.95	8652.92
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	CNYNCPHPNEASFR	C(UniMod:4)NYNC(UniMod:4)PHPNEASFR	3	C(UniMod:4)NYNC(UniMod:4)PHPNEASFR3	72289.1	71365.6	98822.1
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	CPAGFEGATCENDAR	C(UniMod:4)PAGFEGATC(UniMod:4)ENDAR	2	C(UniMod:4)PAGFEGATC(UniMod:4)ENDAR2	7500.21	8444.54	9444.27
F1LSG7	F1LSG7	F1LSG7_RAT	Fgfr2	Fibroblast growth factor receptor	1	CPAGGNPTPTMR	C(UniMod:4)PAGGNPTPTMR	2	C(UniMod:4)PAGGNPTPTMR2	4335.21	3527.39	3376.68
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	CPALTTPGQGTMSCR	C(UniMod:4)PALTTPGQGTMSC(UniMod:4)R	2	C(UniMod:4)PALTTPGQGTMSC(UniMod:4)R2	510675	521312	498068
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	CPALTTPGQGTMSCR	C(UniMod:4)PALTTPGQGTMSC(UniMod:4)R	3	C(UniMod:4)PALTTPGQGTMSC(UniMod:4)R3	28963.9	14999.4	15692.3
B0BNE5	B0BNE5	ESTD_RAT	Esd	S-formylglutathione hydrolase	1	CPALYWLSGLTCTEQNFISK	C(UniMod:4)PALYWLSGLTC(UniMod:4)TEQNFISK	3	C(UniMod:4)PALYWLSGLTC(UniMod:4)TEQNFISK3	8967.23	9188.23	8530.43
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	CPAPPQVANGVTDGLDYGFK	C(UniMod:4)PAPPQVANGVTDGLDYGFK	3	C(UniMod:4)PAPPQVANGVTDGLDYGFK3	10626.7	14348.5	10629.9
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	CPAPPQVANGVTDGLDYGFKK	C(UniMod:4)PAPPQVANGVTDGLDYGFKK	3	C(UniMod:4)PAPPQVANGVTDGLDYGFKK3	8953.59	10145.1	8548.47
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	CPAPTSFENGIYIPR	C(UniMod:4)PAPTSFENGIYIPR	2	C(UniMod:4)PAPTSFENGIYIPR2	23002.4	24335.7	33865.6
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	CPAWCDR	C(UniMod:4)PAWC(UniMod:4)DR	2	C(UniMod:4)PAWC(UniMod:4)DR2	27537.9	30084.5	29501.8
B1H219	B1H219	B1H219_RAT	Dkk3	Dickkopf WNT signaling pathway inhibitor 3	1	CPCASGLLCQPHSHSLVYMCK	C(UniMod:4)PC(UniMod:4)ASGLLC(UniMod:4)QPHSHSLVYMC(UniMod:4)K	3	C(UniMod:4)PC(UniMod:4)ASGLLC(UniMod:4)QPHSHSLVYMC(UniMod:4)K3	34281.3	30852.4	20697.5
B1H219	B1H219	B1H219_RAT	Dkk3	Dickkopf WNT signaling pathway inhibitor 3	1	CPCASGLLCQPHSHSLVYMCK	C(UniMod:4)PC(UniMod:4)ASGLLC(UniMod:4)QPHSHSLVYMC(UniMod:4)K	4	C(UniMod:4)PC(UniMod:4)ASGLLC(UniMod:4)QPHSHSLVYMC(UniMod:4)K4	426192	390646	393810
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	CPCEIYHLMK	C(UniMod:4)PC(UniMod:4)EIYHLMK	3	C(UniMod:4)PC(UniMod:4)EIYHLMK3	5859.45	5221.01	4551.03
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	CPCLTGLDVTGKPVYTLTYGK	C(UniMod:4)PC(UniMod:4)LTGLDVTGKPVYTLTYGK	3	C(UniMod:4)PC(UniMod:4)LTGLDVTGKPVYTLTYGK3	5842.36	8421.42	3810.43
Q4V888	Q4V888;Q5PPM8	PP4P2_RAT	Pip4p2	Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase	0	CPCNCLLICK	C(UniMod:4)PC(UniMod:4)NC(UniMod:4)LLIC(UniMod:4)K	2	C(UniMod:4)PC(UniMod:4)NC(UniMod:4)LLIC(UniMod:4)K2	7945.28	7009.98	4781.26
Q3B7D1	Q3B7D1	UBE2Z_RAT	Ube2z	Ubiquitin-conjugating enzyme E2 Z	1	CPCPEPLR	C(UniMod:4)PC(UniMod:4)PEPLR	2	C(UniMod:4)PC(UniMod:4)PEPLR2	105291	89896.6	120258
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	CPDNSDPLTSMK	C(UniMod:4)PDNSDPLTSMK	2	C(UniMod:4)PDNSDPLTSMK2	10055.7		7800.07
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	CPDNSDPLTSMKDVLK	C(UniMod:4)PDNSDPLTSMKDVLK	3	C(UniMod:4)PDNSDPLTSMKDVLK3	6096.88	10008	8312.46
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	CPDPVPMEPSVVEVICER	C(UniMod:4)PDPVPMEPSVVEVIC(UniMod:4)ER	3	C(UniMod:4)PDPVPMEPSVVEVIC(UniMod:4)ER3		4166.38	4496.76
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	CPDPVPMEPSVVEVICERG	C(UniMod:4)PDPVPMEPSVVEVIC(UniMod:4)ERG	3	C(UniMod:4)PDPVPMEPSVVEVIC(UniMod:4)ERG3	5004.78	4086.51	4529.78
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	CPDYIIQK	C(UniMod:4)PDYIIQK	2	C(UniMod:4)PDYIIQK2	16211.6	14178.8	13361.2
P60711	P60711;P63259;A0A8I5Y704	ACTB_RAT	Actb	Actin, cytoplasmic 1	0	CPEALFQPSFLGMESCGIHETTFNSIMK	C(UniMod:4)PEALFQPSFLGMESC(UniMod:4)GIHETTFNSIMK	4	C(UniMod:4)PEALFQPSFLGMESC(UniMod:4)GIHETTFNSIMK4	1.35124e+06	1.39811e+06	1.79512e+06
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	CPEDSILIEGYAPPGECCPLPSR	C(UniMod:4)PEDSILIEGYAPPGEC(UniMod:4)C(UniMod:4)PLPSR	3	C(UniMod:4)PEDSILIEGYAPPGEC(UniMod:4)C(UniMod:4)PLPSR3	69698.5	96302.2	107362
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	CPEGFLGEYCQHR	C(UniMod:4)PEGFLGEYC(UniMod:4)QHR	3	C(UniMod:4)PEGFLGEYC(UniMod:4)QHR3	8734.03	16488.5	14285
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	CPEGFLGEYCQHRDPCEK	C(UniMod:4)PEGFLGEYC(UniMod:4)QHRDPC(UniMod:4)EK	3	C(UniMod:4)PEGFLGEYC(UniMod:4)QHRDPC(UniMod:4)EK3	3785.9	7530.71	2901.23
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	CPEGFLGEYCQHRDPCEK	C(UniMod:4)PEGFLGEYC(UniMod:4)QHRDPC(UniMod:4)EK	4	C(UniMod:4)PEGFLGEYC(UniMod:4)QHRDPC(UniMod:4)EK4	24353.3	35623.7	39323.9
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	CPEGSFSQDGK	C(UniMod:4)PEGSFSQDGK	2	C(UniMod:4)PEGSFSQDGK2	5650.75	7761.32	6609.19
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	CPENAFFLDHVR	C(UniMod:4)PENAFFLDHVR	2	C(UniMod:4)PENAFFLDHVR2	16512.2	24115.3	9452.3
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	CPENAFFLDHVR	C(UniMod:4)PENAFFLDHVR	3	C(UniMod:4)PENAFFLDHVR3	24699.4	16786.4	16954.3
Q499P3	Q499P3	C1GLC_RAT	C1galt1c1	C1GALT1-specific chaperone 1	1	CPEQGGMIWK	C(UniMod:4)PEQGGMIWK	2	C(UniMod:4)PEQGGMIWK2	4217.58		
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	CPEVCAEGCECDSGFLYNGK	C(UniMod:4)PEVC(UniMod:4)AEGC(UniMod:4)EC(UniMod:4)DSGFLYNGK	3	C(UniMod:4)PEVC(UniMod:4)AEGC(UniMod:4)EC(UniMod:4)DSGFLYNGK3	25107.8	19293.6	18787.5
A0A8I6GEV9	A0A8I6GEV9	A0A8I6GEV9_RAT	Abce1	ATP binding cassette subfamily E member 1	1	CPFGALSIVNLPSNLEK	C(UniMod:4)PFGALSIVNLPSNLEK	2	C(UniMod:4)PFGALSIVNLPSNLEK2	4094.53	4475.87	2086.45
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	CPFIVALNK	C(UniMod:4)PFIVALNK	2	C(UniMod:4)PFIVALNK2	8385.33	6058.57	8322.04
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	CPFLIPFETR	C(UniMod:4)PFLIPFETR	2	C(UniMod:4)PFLIPFETR2	18297.2	19146.6	22341.3
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	CPFPSRPDNGFVNYPAK	C(UniMod:4)PFPSRPDNGFVNYPAK	3	C(UniMod:4)PFPSRPDNGFVNYPAK3	190802	145701	172506
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	CPFPSRPDNGFVNYPAKPVLSYK	C(UniMod:4)PFPSRPDNGFVNYPAKPVLSYK	3	C(UniMod:4)PFPSRPDNGFVNYPAKPVLSYK3	173355	126634	127725
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	CPFPSRPDNGFVNYPAKPVLSYK	C(UniMod:4)PFPSRPDNGFVNYPAKPVLSYK	4	C(UniMod:4)PFPSRPDNGFVNYPAKPVLSYK4	853632	862953	839460
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	CPFSPTPCK	C(UniMod:4)PFSPTPC(UniMod:4)K	2	C(UniMod:4)PFSPTPC(UniMod:4)K2	212719	272691	221788
P62282	P62282;A0A8I6AVZ0;A0A8I6AKU9	RS11_RAT	Rps11	Small ribosomal subunit protein uS17	0	CPFTGNVSIR	C(UniMod:4)PFTGNVSIR	2	C(UniMod:4)PFTGNVSIR2	13857.4	15713.1	15493.5
P23711	P23711	HMOX2_RAT	Hmox2	Heme oxygenase 2	1	CPFYAAQPDK	C(UniMod:4)PFYAAQPDK	2	C(UniMod:4)PFYAAQPDK2	9663.46	5668.6	6911.82
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	CPGDVDFYNSDWDIK	C(UniMod:4)PGDVDFYNSDWDIK	2	C(UniMod:4)PGDVDFYNSDWDIK2	13133.7	3038.44	5738.53
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	CPGGLSDSSR	C(UniMod:4)PGGLSDSSR	2	C(UniMod:4)PGGLSDSSR2	11904.4	26255	6923.46
F1LTX4	F1LTX4	F1LTX4_RAT	Lrrn4	Leucine rich repeat neuronal 4	1	CPGLSGQDTIPDPPK	C(UniMod:4)PGLSGQDTIPDPPK	3	C(UniMod:4)PGLSGQDTIPDPPK3		141617	
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	CPGQYWGPDCR	C(UniMod:4)PGQYWGPDC(UniMod:4)R	2	C(UniMod:4)PGQYWGPDC(UniMod:4)R2	30336.7	44043.1	22602.8
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	CPGRPWK	C(UniMod:4)PGRPWK	2	C(UniMod:4)PGRPWK2	10331.6	6734.72	8502.72
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	CPGRPWKPVSR	C(UniMod:4)PGRPWKPVSR	2	C(UniMod:4)PGRPWKPVSR2	20487.4	19887.7	12629.2
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	CPGRPWKPVSR	C(UniMod:4)PGRPWKPVSR	3	C(UniMod:4)PGRPWKPVSR3	5.72502e+06	5.45269e+06	4.90605e+06
P17988	P17988	ST1A1_RAT	Sult1a1	Sulfotransferase 1A1	1	CPGVPSGLETLEETPAPR	C(UniMod:4)PGVPSGLETLEETPAPR	2	C(UniMod:4)PGVPSGLETLEETPAPR2	2347.47	1925.41	2664.85
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	CPHPLQFDPNQDTHFLYVLAAANLYAR	C(UniMod:4)PHPLQFDPNQDTHFLYVLAAANLYAR	4	C(UniMod:4)PHPLQFDPNQDTHFLYVLAAANLYAR4	4654.64	2695.4	2705.79
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	CPIGYSGLSCESCDAHFTR	C(UniMod:4)PIGYSGLSC(UniMod:4)ESC(UniMod:4)DAHFTR	3	C(UniMod:4)PIGYSGLSC(UniMod:4)ESC(UniMod:4)DAHFTR3	46786.9	68721.8	55680.3
D3ZHQ1	D3ZHQ1	D3ZHQ1_RAT	Dpp8	Dipeptidylpeptidase 8	1	CPIKEEIAITSGEWEVLGR	C(UniMod:4)PIKEEIAITSGEWEVLGR	3	C(UniMod:4)PIKEEIAITSGEWEVLGR3		4805.69	4573.49
Q62651	Q62651	ECH1_RAT	Ech1	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial	1	CPKPVIAAIHGGCIGGGVDLISACDIR	C(UniMod:4)PKPVIAAIHGGC(UniMod:4)IGGGVDLISAC(UniMod:4)DIR	4	C(UniMod:4)PKPVIAAIHGGC(UniMod:4)IGGGVDLISAC(UniMod:4)DIR4	10165.3	7531.5	7897.06
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	CPLAYYGCTYSQR	C(UniMod:4)PLAYYGC(UniMod:4)TYSQR	2	C(UniMod:4)PLAYYGC(UniMod:4)TYSQR2	23275.7	47391.9	42828.2
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	CPLAYYGCTYSQR	C(UniMod:4)PLAYYGC(UniMod:4)TYSQR	3	C(UniMod:4)PLAYYGC(UniMod:4)TYSQR3	21214.6	20300.2	28991.3
D4A4K3	D4A4K3	BAKOR_RAT	Atg14	Beclin 1-associated autophagy-related key regulator	1	CPLCNTTR	C(UniMod:4)PLC(UniMod:4)NTTR	2	C(UniMod:4)PLC(UniMod:4)NTTR2	3269.95		
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	CPLCQEPFPDGLQLR	C(UniMod:4)PLC(UniMod:4)QEPFPDGLQLR	2	C(UniMod:4)PLC(UniMod:4)QEPFPDGLQLR2	7509.21	7325.64	3864.66
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	CPLCQEPFPDGLQLR	C(UniMod:4)PLC(UniMod:4)QEPFPDGLQLR	3	C(UniMod:4)PLC(UniMod:4)QEPFPDGLQLR3	4459.23	3222.68	11321.8
A0A8I6AAL1	A0A8I6AAL1	A0A8I6AAL1_RAT	Rnf7	Ring finger protein 7	1	CPLCQQDWVVQR	C(UniMod:4)PLC(UniMod:4)QQDWVVQR	2	C(UniMod:4)PLC(UniMod:4)QQDWVVQR2	6150.72	5552.18	3323.27
Q09137	Q09137	AAPK2_RAT	Prkaa2	5'-AMP-activated protein kinase catalytic subunit alpha-2	1	CPLDALNTTKPK	C(UniMod:4)PLDALNTTKPK	3	C(UniMod:4)PLDALNTTKPK3	11418.9	10430.2	6098.76
Q9R080	Q9R080	GPSM1_RAT	Gpsm1	G-protein-signaling modulator 1	1	CPLEEGQAGAAEATAAPTLEER	C(UniMod:4)PLEEGQAGAAEATAAPTLEER	3	C(UniMod:4)PLEEGQAGAAEATAAPTLEER3	12078.6	18063.1	13579.3
Q63621	Q63621	IL1AP_RAT	Il1rap	Interleukin-1 receptor accessory protein	1	CPLFEHFLK	C(UniMod:4)PLFEHFLK	3	C(UniMod:4)PLFEHFLK3	4342.29	4175.46	6957.08
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	CPLFPMAR	C(UniMod:4)PLFPMAR	2	C(UniMod:4)PLFPMAR2	21961.2	22761.6	14642.9
P05065	Q6AY07;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	CPLLKPWALTFSYGR	C(UniMod:4)PLLKPWALTFSYGR	2	C(UniMod:4)PLLKPWALTFSYGR2	53744.6	56165.9	37421.7
P05065	Q6AY07;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	CPLLKPWALTFSYGR	C(UniMod:4)PLLKPWALTFSYGR	3	C(UniMod:4)PLLKPWALTFSYGR3	119383	95141.2	124128
Q68FQ9	Q68FQ9	Q68FQ9_RAT	Lancl2	LanC lantibiotic synthetase component C-like 2 (Bacterial)	1	CPLLYQWHR	C(UniMod:4)PLLYQWHR	3	C(UniMod:4)PLLYQWHR3	5270.88	4357	11244.1
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	CPLNPHSHLGTYGVFTNAAYDPTP	C(UniMod:4)PLNPHSHLGTYGVFTNAAYDPTP	3	C(UniMod:4)PLNPHSHLGTYGVFTNAAYDPTP3	42843.2	32205.6	40761.1
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CPLNYFACPSGR	C(UniMod:4)PLNYFAC(UniMod:4)PSGR	2	C(UniMod:4)PLNYFAC(UniMod:4)PSGR2	166517	197360	160856
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CPLNYFACPSGR	C(UniMod:4)PLNYFAC(UniMod:4)PSGR	3	C(UniMod:4)PLNYFAC(UniMod:4)PSGR3	16069.7	17693.4	15091.2
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	CPLPGTAAFK	C(UniMod:4)PLPGTAAFK	2	C(UniMod:4)PLPGTAAFK2	272146	289302	297558
P20611	P20611	PPAL_RAT	Acp2	Lysosomal acid phosphatase	1	CPLQDFLR	C(UniMod:4)PLQDFLR	2	C(UniMod:4)PLQDFLR2	22856.4	11660.7	13426.1
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	CPLSGACYSPEFK	C(UniMod:4)PLSGAC(UniMod:4)YSPEFK	2	C(UniMod:4)PLSGAC(UniMod:4)YSPEFK2	84211.8	100888	88695.6
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	CPMELVR	C(UniMod:4)PMELVR	2	C(UniMod:4)PMELVR2	51752.2	51475.2	67309.7
P12075	P12075	COX5B_RAT	Cox5b	Cytochrome c oxidase subunit 5B, mitochondrial	1	CPNCGTHYK	C(UniMod:4)PNC(UniMod:4)GTHYK	2	C(UniMod:4)PNC(UniMod:4)GTHYK2			10323.4
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	CPNCTETAVDGELVVVYDVNREEK	C(UniMod:4)PNC(UniMod:4)TETAVDGELVVVYDVNREEK	3	C(UniMod:4)PNC(UniMod:4)TETAVDGELVVVYDVNREEK3	109431	115014	81982.9
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	CPNDCHNR	C(UniMod:4)PNDC(UniMod:4)HNR	2	C(UniMod:4)PNDC(UniMod:4)HNR2			2307.22
Q3B7D1	Q3B7D1	UBE2Z_RAT	Ube2z	Ubiquitin-conjugating enzyme E2 Z	1	CPPDYPIHPPR	C(UniMod:4)PPDYPIHPPR	3	C(UniMod:4)PPDYPIHPPR3	70993.3	71938.5	77886.3
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	CPPEIAHLEEGFLVK	C(UniMod:4)PPEIAHLEEGFLVK	3	C(UniMod:4)PPEIAHLEEGFLVK3	69238.2	61853.4	72183.4
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	CPPGFSGAR	C(UniMod:4)PPGFSGAR	2	C(UniMod:4)PPGFSGAR2	33242.7	41751.5	42933
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CPPGFTQHHTACIDNNECTSEINLCGSK	C(UniMod:4)PPGFTQHHTAC(UniMod:4)IDNNEC(UniMod:4)TSEINLC(UniMod:4)GSK	4	C(UniMod:4)PPGFTQHHTAC(UniMod:4)IDNNEC(UniMod:4)TSEINLC(UniMod:4)GSK4	2132.73	3947.37	
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CPPGFYTSPDGTR	C(UniMod:4)PPGFYTSPDGTR	2	C(UniMod:4)PPGFYTSPDGTR2	27224.1	34647.6	27462.5
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	CPPGIWPSHK	C(UniMod:4)PPGIWPSHK	3	C(UniMod:4)PPGIWPSHK3	14962.4	24341.1	21344.8
A0A0G2JSI4	A0A0G2JSI4	A0A0G2JSI4_RAT	Adgre5	Adhesion G protein-coupled receptor E5	1	CPPGWIAIPR	C(UniMod:4)PPGWIAIPR	2	C(UniMod:4)PPGWIAIPR2	382080	430653	428517
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	CPPGYVGLSCQDCAPGYTR	C(UniMod:4)PPGYVGLSC(UniMod:4)QDC(UniMod:4)APGYTR	3	C(UniMod:4)PPGYVGLSC(UniMod:4)QDC(UniMod:4)APGYTR3	15395.4	29343.9	25343.1
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	CPPHSHYEVCADTCSLGCWALSTPQK	C(UniMod:4)PPHSHYEVC(UniMod:4)ADTC(UniMod:4)SLGC(UniMod:4)WALSTPQK	4	C(UniMod:4)PPHSHYEVC(UniMod:4)ADTC(UniMod:4)SLGC(UniMod:4)WALSTPQK4	132060	135621	127869
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	CPPLRVEALK	C(UniMod:4)PPLRVEALK	3	C(UniMod:4)PPLRVEALK3	35700	27773.8	22704.2
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CPPNEHSCLGTELCVPMSR	C(UniMod:4)PPNEHSC(UniMod:4)LGTELC(UniMod:4)VPMSR	3	C(UniMod:4)PPNEHSC(UniMod:4)LGTELC(UniMod:4)VPMSR3	150452	183730	148458
Q9R080	Q9R080	GPSM1_RAT	Gpsm1	G-protein-signaling modulator 1	1	CPPPDVLPR	C(UniMod:4)PPPDVLPR	2	C(UniMod:4)PPPDVLPR2	18391.1	25071.9	17880.3
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	CPPPPVPLNSK	C(UniMod:4)PPPPVPLNSK	2	C(UniMod:4)PPPPVPLNSK2	33761.4	31814.3	35716.3
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	CPSAGNLEGGVATGHYIISWK	C(UniMod:4)PSAGNLEGGVATGHYIISWK	3	C(UniMod:4)PSAGNLEGGVATGHYIISWK3	6314.54	9633.64	10952.4
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	CPSEFDDTFAK	C(UniMod:4)PSEFDDTFAK	2	C(UniMod:4)PSEFDDTFAK2	5578.27	7069.41	6647.41
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	CPSIILHDR	C(UniMod:4)PSIILHDR	2	C(UniMod:4)PSIILHDR2	3278.75	1479.87	3753.07
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	CPSILGGLAPEKDQPK	C(UniMod:4)PSILGGLAPEKDQPK	3	C(UniMod:4)PSILGGLAPEKDQPK3	3870.48	8324.45	
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	CPSILSQPMGEETGK	C(UniMod:4)PSILSQPMGEETGK	2	C(UniMod:4)PSILSQPMGEETGK2	1642.81	4980.78	3006.13
P48450	P48450	LSS_RAT	Lss	Lanosterol synthase	1	CPSITEHVPR	C(UniMod:4)PSITEHVPR	3	C(UniMod:4)PSITEHVPR3	3087.53	7340.86	
P23593	P23593	APOD_RAT	Apod	Apolipoprotein D	1	CPSPPVQENFDVK	C(UniMod:4)PSPPVQENFDVK	2	C(UniMod:4)PSPPVQENFDVK2	143155	172722	141371
P23593	P23593	APOD_RAT	Apod	Apolipoprotein D	1	CPSPPVQENFDVKK	C(UniMod:4)PSPPVQENFDVKK	3	C(UniMod:4)PSPPVQENFDVKK3	115316	118905	114188
G3V7P2	G3V7P2	G3V7P2_RAT	Fgl2	Fibrinogen-like 2	1	CPSQEHNQPNPVQHLIYK	C(UniMod:4)PSQEHNQPNPVQHLIYK	3	C(UniMod:4)PSQEHNQPNPVQHLIYK3	255021	140546	206941
G3V7P2	G3V7P2	G3V7P2_RAT	Fgl2	Fibrinogen-like 2	1	CPSQEHNQPNPVQHLIYK	C(UniMod:4)PSQEHNQPNPVQHLIYK	4	C(UniMod:4)PSQEHNQPNPVQHLIYK4	1.60736e+06	1.09692e+06	1.5359e+06
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	CPSQSSSRPATGISQPPTTPTGQATR	C(UniMod:4)PSQSSSRPATGISQPPTTPTGQATR	3	C(UniMod:4)PSQSSSRPATGISQPPTTPTGQATR3		2223.78	
Q04589	Q04589;A0A8I6A1Z2	FGFR1_RAT	Fgfr1	Fibroblast growth factor receptor 1	0	CPSSGTPSPTLR	C(UniMod:4)PSSGTPSPTLR	2	C(UniMod:4)PSSGTPSPTLR2	58292.6	68072.5	65720.1
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	CPTCHNIIDNCK	C(UniMod:4)PTC(UniMod:4)HNIIDNC(UniMod:4)K	2	C(UniMod:4)PTC(UniMod:4)HNIIDNC(UniMod:4)K2	2266.27		
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	CPTCHNIIDNCK	C(UniMod:4)PTC(UniMod:4)HNIIDNC(UniMod:4)K	3	C(UniMod:4)PTC(UniMod:4)HNIIDNC(UniMod:4)K3	51839.1	48272.6	53159.9
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	CPTCPDACSFK	C(UniMod:4)PTC(UniMod:4)PDAC(UniMod:4)SFK	2	C(UniMod:4)PTC(UniMod:4)PDAC(UniMod:4)SFK2	2.77351e+06	2.85909e+06	3.53626e+06
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	CPTCPDACSFKK	C(UniMod:4)PTC(UniMod:4)PDAC(UniMod:4)SFKK	2	C(UniMod:4)PTC(UniMod:4)PDAC(UniMod:4)SFKK2	54031.3	42499.6	51638.7
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	CPTCPDACSFKK	C(UniMod:4)PTC(UniMod:4)PDAC(UniMod:4)SFKK	3	C(UniMod:4)PTC(UniMod:4)PDAC(UniMod:4)SFKK3	456988	540980	660974
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	CPTDELSLSNCAVVNEK	C(UniMod:4)PTDELSLSNC(UniMod:4)AVVNEK	3	C(UniMod:4)PTDELSLSNC(UniMod:4)AVVNEK3	3563.68	3629.81	2593.6
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CPTGFTGPR	C(UniMod:4)PTGFTGPR	2	C(UniMod:4)PTGFTGPR2	23159.5	24153.2	21658.5
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CPTGYYLNEDTR	C(UniMod:4)PTGYYLNEDTR	2	C(UniMod:4)PTGYYLNEDTR2	17734.3	26758.9	28632.9
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	CPTLEQYAMR	C(UniMod:4)PTLEQYAMR	2	C(UniMod:4)PTLEQYAMR2	19244.3	16221.7	17118.5
Q76LD0	Q76LD0	CRDL1_RAT	Chrdl1	Chordin-like protein 1	1	CPTLHCLSPVHIPHLCCPR	C(UniMod:4)PTLHC(UniMod:4)LSPVHIPHLC(UniMod:4)C(UniMod:4)PR	3	C(UniMod:4)PTLHC(UniMod:4)LSPVHIPHLC(UniMod:4)C(UniMod:4)PR3	6612.33	5762.02	7165.2
Q76LD0	Q76LD0	CRDL1_RAT	Chrdl1	Chordin-like protein 1	1	CPTLHCLSPVHIPHLCCPR	C(UniMod:4)PTLHC(UniMod:4)LSPVHIPHLC(UniMod:4)C(UniMod:4)PR	4	C(UniMod:4)PTLHC(UniMod:4)LSPVHIPHLC(UniMod:4)C(UniMod:4)PR4	36369.4	33378.6	21280.4
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	CPTLVNLAHMMSLYSTHTYSR	C(UniMod:4)PTLVNLAHMMSLYSTHTYSR	4	C(UniMod:4)PTLVNLAHMMSLYSTHTYSR4	9610.53	7857.9	3146.63
P98166	P98166	VLDLR_RAT	Vldlr	Very low-density lipoprotein receptor	1	CPTSEIQCGSGECIHK	C(UniMod:4)PTSEIQC(UniMod:4)GSGEC(UniMod:4)IHK	3	C(UniMod:4)PTSEIQC(UniMod:4)GSGEC(UniMod:4)IHK3	22200.7	17270.2	16686
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	CPVAGAHVPSIVWYK	C(UniMod:4)PVAGAHVPSIVWYK	2	C(UniMod:4)PVAGAHVPSIVWYK2	13852	8533.81	8126.83
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	CPVAGAHVPSIVWYK	C(UniMod:4)PVAGAHVPSIVWYK	3	C(UniMod:4)PVAGAHVPSIVWYK3	430708	438444	469365
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	CPVAGAHVPSIVWYKDER	C(UniMod:4)PVAGAHVPSIVWYKDER	3	C(UniMod:4)PVAGAHVPSIVWYKDER3	28029.9	28432	31855.7
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	CPVAGAHVPSIVWYKDER	C(UniMod:4)PVAGAHVPSIVWYKDER	4	C(UniMod:4)PVAGAHVPSIVWYKDER4	215480	273199	218650
P29066	P29066	ARRB1_RAT	Arrb1	Beta-arrestin-1	1	CPVAMEEADDTVAPSSTFCK	C(UniMod:4)PVAMEEADDTVAPSSTFC(UniMod:4)K	3	C(UniMod:4)PVAMEEADDTVAPSSTFC(UniMod:4)K3	42236.6	36463.4	38880.8
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	CPVAQLEQDDQVSPSSTFCK	C(UniMod:4)PVAQLEQDDQVSPSSTFC(UniMod:4)K	3	C(UniMod:4)PVAQLEQDDQVSPSSTFC(UniMod:4)K3	29523.5	20853.2	44495.2
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	CPVDLPTATCEK	C(UniMod:4)PVDLPTATC(UniMod:4)EK	2	C(UniMod:4)PVDLPTATC(UniMod:4)EK2	197412	222671	198187
B5DF45	B5DF45	TRAF6_RAT	Traf6	TNF receptor-associated factor 6	1	CPVDNEILLENQLFPDNFAK	C(UniMod:4)PVDNEILLENQLFPDNFAK	3	C(UniMod:4)PVDNEILLENQLFPDNFAK3		4600.55	
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	CPVFLQWLDCVHQLQR	C(UniMod:4)PVFLQWLDC(UniMod:4)VHQLQR	3	C(UniMod:4)PVFLQWLDC(UniMod:4)VHQLQR3	6137.37	8643.24	7804.41
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	CPVGYQLEK	C(UniMod:4)PVGYQLEK	2	C(UniMod:4)PVGYQLEK2	78697	107977	84851.9
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CPVGYVLR	C(UniMod:4)PVGYVLR	2	C(UniMod:4)PVGYVLR2	46496.7	55893.9	59088.5
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	CPVLVGTQALVQEGYEGR	C(UniMod:4)PVLVGTQALVQEGYEGR	3	C(UniMod:4)PVLVGTQALVQEGYEGR3	75220.4	69246	67636.3
O88422	O88422	GALT5_RAT	Galnt5	Polypeptide N-acetylgalactosaminyltransferase 5	1	CPVMAGGLFSIDK	C(UniMod:4)PVMAGGLFSIDK	2	C(UniMod:4)PVMAGGLFSIDK2	6942.73	5916.82	11288.9
Q8VBU2	Q8VBU2	NDRG2_RAT	Ndrg2	Protein NDRG2	1	CPVMLVVGDQAPHEDAVVECNSK	C(UniMod:4)PVMLVVGDQAPHEDAVVEC(UniMod:4)NSK	3	C(UniMod:4)PVMLVVGDQAPHEDAVVEC(UniMod:4)NSK3		3286.97	3586.4
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	CPVTGVK	C(UniMod:4)PVTGVK	2	C(UniMod:4)PVTGVK2	170287	177206	179739
P62716	A0A0G2JYA4;P63331;P62716	PP2AB_RAT	Ppp2cb	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	0	CPVTVCGDVHGQFHDLMELFR	C(UniMod:4)PVTVC(UniMod:4)GDVHGQFHDLMELFR	3	C(UniMod:4)PVTVC(UniMod:4)GDVHGQFHDLMELFR3		4812.66	8302.64
P62716	A0A0G2JYA4;P63331;P62716	PP2AB_RAT	Ppp2cb	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	0	CPVTVCGDVHGQFHDLMELFR	C(UniMod:4)PVTVC(UniMod:4)GDVHGQFHDLMELFR	4	C(UniMod:4)PVTVC(UniMod:4)GDVHGQFHDLMELFR4	19308.2	21527.8	36974.1
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	CPVVLAPLLYPEK	C(UniMod:4)PVVLAPLLYPEK	2	C(UniMod:4)PVVLAPLLYPEK2	3130.94	1636.67	957.457
Q4V8B7	Q4V8B7	HSDL1_RAT	Hsdl1	Inactive hydroxysteroid dehydrogenase-like protein 1	1	CPWLAPSPR	C(UniMod:4)PWLAPSPR	2	C(UniMod:4)PWLAPSPR2	36698.3	33564.6	36758.2
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	CPWQDEAFIR	C(UniMod:4)PWQDEAFIR	2	C(UniMod:4)PWQDEAFIR2	45433.9	56631.2	57066.8
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	CPWQDEAFIRR	C(UniMod:4)PWQDEAFIRR	3	C(UniMod:4)PWQDEAFIRR3	6498.24	10096.8	12742.6
P02770	P02770	ALBU_RAT	Alb	Albumin	1	CPYEEHIK	C(UniMod:4)PYEEHIK	2	C(UniMod:4)PYEEHIK2	750414	551625	829069
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	CPYIIGTTNQPVK	C(UniMod:4)PYIIGTTNQPVK	2	C(UniMod:4)PYIIGTTNQPVK2	7663.57	12610.4	5863.87
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	CQADLQQLQSDLYGK	C(UniMod:4)QADLQQLQSDLYGK	2	C(UniMod:4)QADLQQLQSDLYGK2	5661.43	5707.45	7458.84
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	CQAEEEMDEIRK	C(UniMod:4)QAEEEMDEIRK	3	C(UniMod:4)QAEEEMDEIRK3	18013.3	4910.57	11001.1
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	CQAEVDCGQPEEVK	C(UniMod:4)QAEVDC(UniMod:4)GQPEEVK	2	C(UniMod:4)QAEVDC(UniMod:4)GQPEEVK2	34944.8	28983.6	32790.3
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	CQAFTHQMAQFLSALEQDGK	C(UniMod:4)QAFTHQMAQFLSALEQDGK	3	C(UniMod:4)QAFTHQMAQFLSALEQDGK3	8360.92	11872.2	4373.04
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	CQAGVLSGIK	C(UniMod:4)QAGVLSGIK	2	C(UniMod:4)QAGVLSGIK2	24223.7	21830.7	23406.5
P01048	P08932;A0A0G2KA54;P01048	KNT1_RAT	Map1	T-kininogen 1	0	CQALDMMISRPPGFSPFR	C(UniMod:4)QALDMMISRPPGFSPFR	3	C(UniMod:4)QALDMMISRPPGFSPFR3	668610	779845	692120
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	CQALNAADPGSDLLSVQALQR	C(UniMod:4)QALNAADPGSDLLSVQALQR	3	C(UniMod:4)QALNAADPGSDLLSVQALQR3	64989	51866.1	72734.9
G3V7M2	G3V7M2	G3V7M2_RAT	Itgb7	Integrin beta	1	CQAPFSYHHVLPLTR	C(UniMod:4)QAPFSYHHVLPLTR	4	C(UniMod:4)QAPFSYHHVLPLTR4		6510.5	
Q5PPG7	Q5PPG7	EIF2D_RAT	Eif2d	Eukaryotic translation initiation factor 2D	1	CQASTIVSPAPGAK	C(UniMod:4)QASTIVSPAPGAK	2	C(UniMod:4)QASTIVSPAPGAK2		2736.18	1163
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	CQCAPGWR	C(UniMod:4)QC(UniMod:4)APGWR	2	C(UniMod:4)QC(UniMod:4)APGWR2	86619.8	77416.5	90955.2
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	CQCDELCTYYQSCCVDYMEQCKPQVTR	C(UniMod:4)QC(UniMod:4)DELC(UniMod:4)TYYQSC(UniMod:4)C(UniMod:4)VDYMEQC(UniMod:4)KPQVTR	4	C(UniMod:4)QC(UniMod:4)DELC(UniMod:4)TYYQSC(UniMod:4)C(UniMod:4)VDYMEQC(UniMod:4)KPQVTR4	19248.6	14192.8	12038.6
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	CQCPPNFTGK	C(UniMod:4)QC(UniMod:4)PPNFTGK	2	C(UniMod:4)QC(UniMod:4)PPNFTGK2	132711	204413	174452
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	CQDEQQYAQWMAACR	C(UniMod:4)QDEQQYAQWMAAC(UniMod:4)R	2	C(UniMod:4)QDEQQYAQWMAAC(UniMod:4)R2	135431	118220	121649
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	CQDEQQYAQWMAACR	C(UniMod:4)QDEQQYAQWMAAC(UniMod:4)R	3	C(UniMod:4)QDEQQYAQWMAAC(UniMod:4)R3	233020	219851	221964
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	CQDETQTISSLK	C(UniMod:4)QDETQTISSLK	2	C(UniMod:4)QDETQTISSLK2	7923.58	3763.58	3451.26
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	CQDGFMMK	C(UniMod:4)QDGFMMK	2	C(UniMod:4)QDGFMMK2	139092	137131	177815
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	CQDPSPCLSTPCK	C(UniMod:4)QDPSPC(UniMod:4)LSTPC(UniMod:4)K	3	C(UniMod:4)QDPSPC(UniMod:4)LSTPC(UniMod:4)K3		3269.07	
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	CQEGLGR	C(UniMod:4)QEGLGR	2	C(UniMod:4)QEGLGR2	212815	233057	286670
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	CQEGSLAGEQTWEWR	C(UniMod:4)QEGSLAGEQTWEWR	2	C(UniMod:4)QEGSLAGEQTWEWR2	6866.8	5591.24	7988.7
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	CQEILSVDCSTNNPAQANLR	C(UniMod:4)QEILSVDC(UniMod:4)STNNPAQANLR	3	C(UniMod:4)QEILSVDC(UniMod:4)STNNPAQANLR3	3.86654e+06	3.91337e+06	4.26329e+06
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	CQEQLFALLQALGR	C(UniMod:4)QEQLFALLQALGR	2	C(UniMod:4)QEQLFALLQALGR2	27947.3	32885.2	17730.6
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	CQEQLFALLQALGR	C(UniMod:4)QEQLFALLQALGR	3	C(UniMod:4)QEQLFALLQALGR3	31180.9	19642.1	24110.1
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	CQEVINWLDR	C(UniMod:4)QEVINWLDR	2	C(UniMod:4)QEVINWLDR2	17372.1	8294.15	10869.5
B4F795	B4F795	CTL2_RAT	Slc44a2	Choline transporter-like protein 2	1	CQFAFYGGESTYHR	C(UniMod:4)QFAFYGGESTYHR	2	C(UniMod:4)QFAFYGGESTYHR2	9146.06	5673.8	3860.92
B4F795	B4F795	CTL2_RAT	Slc44a2	Choline transporter-like protein 2	1	CQFAFYGGESTYHR	C(UniMod:4)QFAFYGGESTYHR	3	C(UniMod:4)QFAFYGGESTYHR3	41432.4	45960.8	49745.8
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	CQFDINECK	C(UniMod:4)QFDINEC(UniMod:4)K	2	C(UniMod:4)QFDINEC(UniMod:4)K2	195754	144144	167181
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	CQFFTYSLLPQDCK	C(UniMod:4)QFFTYSLLPQDC(UniMod:4)K	2	C(UniMod:4)QFFTYSLLPQDC(UniMod:4)K2	91303.7	90180.4	97569
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	CQFFTYSLLPQDCK	C(UniMod:4)QFFTYSLLPQDC(UniMod:4)K	3	C(UniMod:4)QFFTYSLLPQDC(UniMod:4)K3	34648.7	44547	36592.3
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	CQFFTYYPSR	C(UniMod:4)QFFTYYPSR	2	C(UniMod:4)QFFTYYPSR2	20726.6	24369.1	23740.7
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	CQFPTFEQCQDWLK	C(UniMod:4)QFPTFEQC(UniMod:4)QDWLK	2	C(UniMod:4)QFPTFEQC(UniMod:4)QDWLK2	3460.22	8984.46	7558.83
A0A0G2K059	A0A0G2K059	A0A0G2K059_RAT	Mcu	Calcium uniporter protein	1	CQFTLKPISDSVGVFLR	C(UniMod:4)QFTLKPISDSVGVFLR	3	C(UniMod:4)QFTLKPISDSVGVFLR3	101060	67053.9	72555.6
P09117	P09117	ALDOC_RAT	Aldoc	Fructose-bisphosphate aldolase C	1	CQFVTEK	C(UniMod:4)QFVTEK	2	C(UniMod:4)QFVTEK2	5547.5	4205.68	5689.49
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	CQGGMNPAR	C(UniMod:4)QGGMNPAR	2	C(UniMod:4)QGGMNPAR2	148149	143993	175706
Q925N6	Q925N6	IGSF1_RAT	Igsf1	Immunoglobulin superfamily member 1	1	CQGIFQGMR	C(UniMod:4)QGIFQGMR	2	C(UniMod:4)QGIFQGMR2		6793.66	11286.8
Q5PQQ8	Q5PQQ8	ITGBL_RAT	Itgbl1	Integrin beta-like protein 1	1	CQGSSDLPCSGR	C(UniMod:4)QGSSDLPC(UniMod:4)SGR	2	C(UniMod:4)QGSSDLPC(UniMod:4)SGR2	28204.8	19222.9	28286.5
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	CQGSTTGMDSGTQVIR	C(UniMod:4)QGSTTGMDSGTQVIR	2	C(UniMod:4)QGSTTGMDSGTQVIR2	39848.9	42284.9	38473.4
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	CQGSTTGMDSGTQVIR	C(UniMod:4)QGSTTGMDSGTQVIR	3	C(UniMod:4)QGSTTGMDSGTQVIR3	3756.27	4061.89	5551.64
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	CQGVETSLAECTFTK	C(UniMod:4)QGVETSLAEC(UniMod:4)TFTK	2	C(UniMod:4)QGVETSLAEC(UniMod:4)TFTK2	112768	76234.2	85338.7
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	CQGVETSLAECTFTK	C(UniMod:4)QGVETSLAEC(UniMod:4)TFTK	3	C(UniMod:4)QGVETSLAEC(UniMod:4)TFTK3	32135.5	25017.6	34083
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	CQGVETSLAECTFTKK	C(UniMod:4)QGVETSLAEC(UniMod:4)TFTKK	3	C(UniMod:4)QGVETSLAEC(UniMod:4)TFTKK3	9122.31	16264.5	13339.7
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	CQHLCHNYVGGYFCSCR	C(UniMod:4)QHLC(UniMod:4)HNYVGGYFC(UniMod:4)SC(UniMod:4)R	3	C(UniMod:4)QHLC(UniMod:4)HNYVGGYFC(UniMod:4)SC(UniMod:4)R3	41650.3		24251
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	CQHLCHNYVGGYFCSCR	C(UniMod:4)QHLC(UniMod:4)HNYVGGYFC(UniMod:4)SC(UniMod:4)R	4	C(UniMod:4)QHLC(UniMod:4)HNYVGGYFC(UniMod:4)SC(UniMod:4)R4	15156.3	6403.1	6392.31
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	CQHLCHNYVGGYFCSCRPGYELQK	C(UniMod:4)QHLC(UniMod:4)HNYVGGYFC(UniMod:4)SC(UniMod:4)RPGYELQK	4	C(UniMod:4)QHLC(UniMod:4)HNYVGGYFC(UniMod:4)SC(UniMod:4)RPGYELQK4	59136.1	33514.5	42156.6
Q56AP7	Q56AP7	CRBN_RAT	Crbn	Protein cereblon	1	CQIFPSKPISWEDQYSCK	C(UniMod:4)QIFPSKPISWEDQYSC(UniMod:4)K	3	C(UniMod:4)QIFPSKPISWEDQYSC(UniMod:4)K3	3629.38	5341.21	2645.08
B5DFH7	B5DFH7	B5DFH7_RAT	Traf2	TNF receptor-associated factor	1	CQILEQK	C(UniMod:4)QILEQK	2	C(UniMod:4)QILEQK2	3333.5		
Q9Z1P2	Q9QXQ0;Q8R4I6;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	CQLEINFNTLQTK	C(UniMod:4)QLEINFNTLQTK	2	C(UniMod:4)QLEINFNTLQTK2	1.93374e+06	2.17811e+06	2.05093e+06
Q9Z1P2	Q9QXQ0;Q8R4I6;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	CQLEINFNTLQTK	C(UniMod:4)QLEINFNTLQTK	3	C(UniMod:4)QLEINFNTLQTK3	296885	321745	288476
P08650	P08650	CO5_RAT	C5	Complement C5	1	CQLENGSFK	C(UniMod:4)QLENGSFK	2	C(UniMod:4)QLENGSFK2	83281	51756.7	33885.3
P08650	P08650	CO5_RAT	C5	Complement C5	1	CQLENGSFKENSQYLPIK	C(UniMod:4)QLENGSFKENSQYLPIK	3	C(UniMod:4)QLENGSFKENSQYLPIK3	6042.79	10371.6	4977.48
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	CQLLDDLTTSEMEQLR	C(UniMod:4)QLLDDLTTSEMEQLR	3	C(UniMod:4)QLLDDLTTSEMEQLR3	2154.55	7068.47	4583.77
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	CQLSPYCK	C(UniMod:4)QLSPYC(UniMod:4)K	2	C(UniMod:4)QLSPYC(UniMod:4)K2	10595.9	10936.5	14543.6
Q80WD1	Q80WD1	R4RL2_RAT	Rtn4rl2	Reticulon-4 receptor-like 2	1	CQLSSLPGNIFR	C(UniMod:4)QLSSLPGNIFR	2	C(UniMod:4)QLSSLPGNIFR2	8528.59	4852.59	3193.96
Q8VHC1	Q8VHC1	Q8VHC1_RAT	Cst6	Cystatin E/M	1	CQLVAGIK	C(UniMod:4)QLVAGIK	2	C(UniMod:4)QLVAGIK2	23305.8	16920.5	21832.3
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	CQMVSGK	C(UniMod:4)QMVSGK	1	C(UniMod:4)QMVSGK1	23429.7		31524.9
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	CQMVSGK	C(UniMod:4)QMVSGK	2	C(UniMod:4)QMVSGK2	298475		271282
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	CQNEQLQTAVTQQASQIQQHK	C(UniMod:4)QNEQLQTAVTQQASQIQQHK	3	C(UniMod:4)QNEQLQTAVTQQASQIQQHK3	86689.8	110312	105243
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	CQNEQLQTAVTQQASQIQQHK	C(UniMod:4)QNEQLQTAVTQQASQIQQHK	4	C(UniMod:4)QNEQLQTAVTQQASQIQQHK4	10809.7	11107.9	9173.77
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	CQNPDFLR	C(UniMod:4)QNPDFLR	2	C(UniMod:4)QNPDFLR2	17529.4	16089.4	23393.5
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	CQNYGILPVNR	C(UniMod:4)QNYGILPVNR	2	C(UniMod:4)QNYGILPVNR2	58796.3	51172	52280.8
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	CQPAVSTR	C(UniMod:4)QPAVSTR	2	C(UniMod:4)QPAVSTR2	48602.7	60004.3	58762
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	CQPIEFDSTGNR	C(UniMod:4)QPIEFDSTGNR	2	C(UniMod:4)QPIEFDSTGNR2	298382	302676	326703
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	CQPIEFDSTGNR	C(UniMod:4)QPIEFDSTGNR	3	C(UniMod:4)QPIEFDSTGNR3	4391.68	3198.03	2750.23
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	CQPIEFDSTGNRDYAK	C(UniMod:4)QPIEFDSTGNRDYAK	2	C(UniMod:4)QPIEFDSTGNRDYAK2		4866.76	3406.38
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	CQPIEFDSTGNRDYAK	C(UniMod:4)QPIEFDSTGNRDYAK	3	C(UniMod:4)QPIEFDSTGNRDYAK3	48470.6	69232.4	52741.6
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	CQPNSLFGESMIEMGAPFSLK	C(UniMod:4)QPNSLFGESMIEMGAPFSLK	3	C(UniMod:4)QPNSLFGESMIEMGAPFSLK3	53565	39896.5	68984.3
Q9ES54	Q9ES54	NPL4_RAT	Nploc4	Nuclear protein localization protein 4 homolog	1	CQPSAITLNR	C(UniMod:4)QPSAITLNR	2	C(UniMod:4)QPSAITLNR2	14496.4	14519.4	
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	CQQCEVQQR	C(UniMod:4)QQC(UniMod:4)EVQQR	2	C(UniMod:4)QQC(UniMod:4)EVQQR2			9372.19
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	CQQDPESYWYFHK	C(UniMod:4)QQDPESYWYFHK	3	C(UniMod:4)QQDPESYWYFHK3	4886.75	3823.88	5053.07
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	CQQDSDELLK	C(UniMod:4)QQDSDELLK	2	C(UniMod:4)QQDSDELLK2	9039.09	17846.1	8702.51
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	CQQLAAYGILEK	C(UniMod:4)QQLAAYGILEK	2	C(UniMod:4)QQLAAYGILEK2	51689.4	48824.8	62977.8
Q9JLH7	Q9JLH7	CK5P3_RAT	Cdk5rap3	CDK5 regulatory subunit-associated protein 3	1	CQQLQQDYSR	C(UniMod:4)QQLQQDYSR	2	C(UniMod:4)QQLQQDYSR2	19235.6	14579.3	18930
Q6TMG5	Q6TMG5	NEMO_RAT	Ikbkg	NF-kappa-B essential modulator	1	CQQQMAEDK	C(UniMod:4)QQQMAEDK	2	C(UniMod:4)QQQMAEDK2			2156.33
Q5M936	Q5M936	TOR3A_RAT	Tor3a	Torsin-3A	1	CQQSTFVFDEAEK	C(UniMod:4)QQSTFVFDEAEK	2	C(UniMod:4)QQSTFVFDEAEK2	6133.29	5873.38	6364.68
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	CQQVKVENPK	C(UniMod:4)QQVKVENPK	3	C(UniMod:4)QQVKVENPK3	10540.4	18684.3	9497.7
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	CQQVKVENPKAR	C(UniMod:4)QQVKVENPKAR	3	C(UniMod:4)QQVKVENPKAR3	1645.27		885.013
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	CQSDIDECAGNPCR	C(UniMod:4)QSDIDEC(UniMod:4)AGNPC(UniMod:4)R	2	C(UniMod:4)QSDIDEC(UniMod:4)AGNPC(UniMod:4)R2	12462.5	8356.17	14822
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	CQSQDGAEAALQEIEK	C(UniMod:4)QSQDGAEAALQEIEK	2	C(UniMod:4)QSQDGAEAALQEIEK2	5979.99	1744.56	10271.1
M0R8A3	M0R8A3	M0R8A3_RAT	Gp6	Glycoprotein 6 (platelet)	1	CQSQYSFDEFVLYK	C(UniMod:4)QSQYSFDEFVLYK	2	C(UniMod:4)QSQYSFDEFVLYK2	43928.4	33918.8	56450.8
M0R8A3	M0R8A3	M0R8A3_RAT	Gp6	Glycoprotein 6 (platelet)	1	CQSQYSFDEFVLYK	C(UniMod:4)QSQYSFDEFVLYK	3	C(UniMod:4)QSQYSFDEFVLYK3	16244.4	11102.8	12484.1
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	CQSWVSMTPHSHSK	C(UniMod:4)QSWVSMTPHSHSK	2	C(UniMod:4)QSWVSMTPHSHSK2	21220.2	27151.1	26367.5
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	CQSWVSMTPHSHSK	C(UniMod:4)QSWVSMTPHSHSK	3	C(UniMod:4)QSWVSMTPHSHSK3	57361.6	55342.2	56844.4
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	CQSWVSMTPHSHSK	C(UniMod:4)QSWVSMTPHSHSK	4	C(UniMod:4)QSWVSMTPHSHSK4	560428	526657	537944
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	CQSWVSMTPHSHSKTPANFPDAGLEMNYCR	C(UniMod:4)QSWVSMTPHSHSKTPANFPDAGLEMNYC(UniMod:4)R	4	C(UniMod:4)QSWVSMTPHSHSKTPANFPDAGLEMNYC(UniMod:4)R4	36478.3	44687.5	42164.2
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	CQTALFPCESQPCQHGGQCRPSLGR	C(UniMod:4)QTALFPC(UniMod:4)ESQPC(UniMod:4)QHGGQC(UniMod:4)RPSLGR	4	C(UniMod:4)QTALFPC(UniMod:4)ESQPC(UniMod:4)QHGGQC(UniMod:4)RPSLGR4	10673.1		7826.52
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	CQTAMPQYDCVWCEGEHPR	C(UniMod:4)QTAMPQYDC(UniMod:4)VWC(UniMod:4)EGEHPR	3	C(UniMod:4)QTAMPQYDC(UniMod:4)VWC(UniMod:4)EGEHPR3	11526.7	10646	10247
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	CQTLAVHSYR	C(UniMod:4)QTLAVHSYR	2	C(UniMod:4)QTLAVHSYR2	35408.2	28638.4	28295
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	CQTLAVHSYR	C(UniMod:4)QTLAVHSYR	3	C(UniMod:4)QTLAVHSYR3	146408	147260	164309
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	CQTVQNK	C(UniMod:4)QTVQNK	1	C(UniMod:4)QTVQNK1			6908.5
P81828	A0A0G2JT40;P81828	UP2_RAT		Urinary protein 2	0	CQTYPDEICAWVVVTTR	C(UniMod:4)QTYPDEIC(UniMod:4)AWVVVTTR	3	C(UniMod:4)QTYPDEIC(UniMod:4)AWVVVTTR3		10066.4	
D4ABL6	D4ABL6	MCTP1_RAT	Mctp1	Multiple C2 and transmembrane domain-containing protein 1	1	CQVDLSSLSR	C(UniMod:4)QVDLSSLSR	2	C(UniMod:4)QVDLSSLSR2	1864.55	4162.41	3299.03
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	CQVFEETQIGGER	C(UniMod:4)QVFEETQIGGER	2	C(UniMod:4)QVFEETQIGGER2	142574	131085	136609
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	CQVFEETQIGGER	C(UniMod:4)QVFEETQIGGER	3	C(UniMod:4)QVFEETQIGGER3	11252.4	18696.2	21467.5
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	CQVLLEAAR	C(UniMod:4)QVLLEAAR	2	C(UniMod:4)QVLLEAAR2	35242.4	38166.8	29223.9
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	CQVNGSPPHYFYWSR	C(UniMod:4)QVNGSPPHYFYWSR	3	C(UniMod:4)QVNGSPPHYFYWSR3	17770.8	18636.3	15265.4
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	CQVPLGMASGYIR	C(UniMod:4)QVPLGMASGYIR	2	C(UniMod:4)QVPLGMASGYIR2	274502	339590	288770
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	CQVPLGMASGYIR	C(UniMod:4)QVPLGMASGYIR	3	C(UniMod:4)QVPLGMASGYIR3	5275.77	10372.9	5799.7
D3ZII8	D3ZII8	D3ZII8_RAT	Smyd5	Histone-lysine N-trimethyltransferase SMYD5	1	CQVTYCSAECR	C(UniMod:4)QVTYC(UniMod:4)SAEC(UniMod:4)R	2	C(UniMod:4)QVTYC(UniMod:4)SAEC(UniMod:4)R2	14932.7	15746	14555.3
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	CQYISAVDK	C(UniMod:4)QYISAVDK	2	C(UniMod:4)QYISAVDK2	13701.9	8903.53	19379
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	CQYLQAEK	C(UniMod:4)QYLQAEK	2	C(UniMod:4)QYLQAEK2	5.59359e+06	6.93228e+06	6.36735e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	CQYLQAEKK	C(UniMod:4)QYLQAEKK	2	C(UniMod:4)QYLQAEKK2	82667.9	90107	90018.8
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	CQYLQAEKK	C(UniMod:4)QYLQAEKK	3	C(UniMod:4)QYLQAEKK3	511163	778196	788647
P05065	A0A8I6ANB6;Q6AY07;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	CQYVTEK	C(UniMod:4)QYVTEK	1	C(UniMod:4)QYVTEK1	3021.78	4108.6	5458.64
P05065	A0A8I6ANB6;Q6AY07;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	CQYVTEK	C(UniMod:4)QYVTEK	2	C(UniMod:4)QYVTEK2	110718	93273.2	99130
P14740	P14740	DPP4_RAT	Dpp4	Dipeptidyl peptidase 4	1	CQYYSVSLSK	C(UniMod:4)QYYSVSLSK	2	C(UniMod:4)QYYSVSLSK2	3788.38	3466.64	
P62944	A0A8I5ZZX8;P62944	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	CRAPEVSQYIYQVYDSILK	C(UniMod:4)RAPEVSQYIYQVYDSILK	3	C(UniMod:4)RAPEVSQYIYQVYDSILK3	4685.77		
P62944	A0A8I5ZZX8;P62944	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	CRAPEVSQYIYQVYDSILKN	C(UniMod:4)RAPEVSQYIYQVYDSILKN	3	C(UniMod:4)RAPEVSQYIYQVYDSILKN3	5897.18	7780.2	9110.91
Q5PQQ8	Q5PQQ8	ITGBL_RAT	Itgbl1	Integrin beta-like protein 1	1	CRAPGQPPGSALCHDR	C(UniMod:4)RAPGQPPGSALC(UniMod:4)HDR	3	C(UniMod:4)RAPGQPPGSALC(UniMod:4)HDR3	13508.6	11074.8	9723.3
Q5PQQ8	Q5PQQ8	ITGBL_RAT	Itgbl1	Integrin beta-like protein 1	1	CRAPGQPPGSALCHDR	C(UniMod:4)RAPGQPPGSALC(UniMod:4)HDR	4	C(UniMod:4)RAPGQPPGSALC(UniMod:4)HDR4	19894.5	26210.5	10761.6
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	CRDGYILIGSSQIR	C(UniMod:4)RDGYILIGSSQIR	3	C(UniMod:4)RDGYILIGSSQIR3	23916.8	22237.1	13604.4
Q5FVL2	Q5FVL2	EMC8_RAT	Emc8	ER membrane protein complex subunit 8	1	CRDPHHDYCEDWPEAQR	C(UniMod:4)RDPHHDYC(UniMod:4)EDWPEAQR	3	C(UniMod:4)RDPHHDYC(UniMod:4)EDWPEAQR3	4387.87		
Q5FVL2	Q5FVL2	EMC8_RAT	Emc8	ER membrane protein complex subunit 8	1	CRDPHHDYCEDWPEAQR	C(UniMod:4)RDPHHDYC(UniMod:4)EDWPEAQR	4	C(UniMod:4)RDPHHDYC(UniMod:4)EDWPEAQR4	15125.4	13299.7	2873.72
D3ZUU6	D3ZUU6	D3ZUU6_RAT	Clec3b	C-type lectin domain family 3, member B	1	CRDQLPYICQFAIV	C(UniMod:4)RDQLPYIC(UniMod:4)QFAIV	2	C(UniMod:4)RDQLPYIC(UniMod:4)QFAIV2		5145.74	
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	CRECNSYVYFQGAECEECCLACHK	C(UniMod:4)REC(UniMod:4)NSYVYFQGAEC(UniMod:4)EEC(UniMod:4)C(UniMod:4)LAC(UniMod:4)HK	4	C(UniMod:4)REC(UniMod:4)NSYVYFQGAEC(UniMod:4)EEC(UniMod:4)C(UniMod:4)LAC(UniMod:4)HK4	17618.5	18768.5	13293.3
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	CREDQWFPLEPCTETYPDR	C(UniMod:4)REDQWFPLEPC(UniMod:4)TETYPDR	3	C(UniMod:4)REDQWFPLEPC(UniMod:4)TETYPDR3	64740.9	75678.8	68224.8
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	CREECPVGR	C(UniMod:4)REEC(UniMod:4)PVGR	3	C(UniMod:4)REEC(UniMod:4)PVGR3			32015.4
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	CREHENNLEGIIK	C(UniMod:4)REHENNLEGIIK	3	C(UniMod:4)REHENNLEGIIK3	4368.07	4054.94	
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	CREHENNLEGIIK	C(UniMod:4)REHENNLEGIIK	4	C(UniMod:4)REHENNLEGIIK4		13751.9	7620.68
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	CREMDEQIR	C(UniMod:4)REMDEQIR	2	C(UniMod:4)REMDEQIR2	92630.3	110237	105284
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	CREMDEQIR	C(UniMod:4)REMDEQIR	3	C(UniMod:4)REMDEQIR3	1.23419e+06	1.56959e+06	1.63006e+06
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	CRLEEPCQVETGHCQR	C(UniMod:4)RLEEPC(UniMod:4)QVETGHC(UniMod:4)QR	3	C(UniMod:4)RLEEPC(UniMod:4)QVETGHC(UniMod:4)QR3	5687.17	3301.67	4172.44
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	CRLEEPCQVETGHCQR	C(UniMod:4)RLEEPC(UniMod:4)QVETGHC(UniMod:4)QR	4	C(UniMod:4)RLEEPC(UniMod:4)QVETGHC(UniMod:4)QR4	32108.4	26991	38118.4
P09215	P09215	KPCD_RAT	Prkcd	Protein kinase C delta type	1	CRLENFTFQK	C(UniMod:4)RLENFTFQK	3	C(UniMod:4)RLENFTFQK3	4126.88	5456.06	12000
B1WBZ6	B1WBZ6	B1WBZ6_RAT	RGD1565685	RGD1565685 protein	1	CRNEIMHSSEMK	C(UniMod:4)RNEIMHSSEMK	3	C(UniMod:4)RNEIMHSSEMK3	2935.51	3180.09	544.038
B1WBZ6	B1WBZ6	B1WBZ6_RAT	RGD1565685	RGD1565685 protein	1	CRNEIMHSSEMK	C(UniMod:4)RNEIMHSSEMK	4	C(UniMod:4)RNEIMHSSEMK4	2245.53	2969.88	820.723
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	CRPGFDLVGSSIHLCQPNGLWSGTESFCR	C(UniMod:4)RPGFDLVGSSIHLC(UniMod:4)QPNGLWSGTESFC(UniMod:4)R	4	C(UniMod:4)RPGFDLVGSSIHLC(UniMod:4)QPNGLWSGTESFC(UniMod:4)R4	17740.2	27399.8	21619.3
P21744	P21744	IBP4_RAT	Igfbp4	Insulin-like growth factor-binding protein 4	1	CRPPVGCEELVR	C(UniMod:4)RPPVGC(UniMod:4)EELVR	3	C(UniMod:4)RPPVGC(UniMod:4)EELVR3	13321.6	10806.7	16698.5
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	CRPSNQELVR	C(UniMod:4)RPSNQELVR	3	C(UniMod:4)RPSNQELVR3	35117.9	50653.5	41213.3
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	CRPTICDK	C(UniMod:4)RPTIC(UniMod:4)DK	2	C(UniMod:4)RPTIC(UniMod:4)DK2	13145.9	10254.5	12189.3
P51111	P51111	HD_RAT	Htt	Huntingtin	1	CRPYLVNLLPCLTR	C(UniMod:4)RPYLVNLLPC(UniMod:4)LTR	3	C(UniMod:4)RPYLVNLLPC(UniMod:4)LTR3	14157.6	25096.6	9130.5
D3ZER6	D3ZER6	D3ZER6_RAT	Tnpo2	Transportin 2	1	CSAAALDVLANVFR	C(UniMod:4)SAAALDVLANVFR	2	C(UniMod:4)SAAALDVLANVFR2	3115.17	4139.96	4085.64
Q6TEK3	Q6TEK3	VKORL_RAT	Vkorc1l1	Vitamin K epoxide reductase complex subunit 1-like protein 1	1	CSAALASR	C(UniMod:4)SAALASR	2	C(UniMod:4)SAALASR2		71032.4	
P18395	P18395	CSDE1_RAT	Csde1	Cold shock domain-containing protein E1	1	CSACNVWR	C(UniMod:4)SAC(UniMod:4)NVWR	2	C(UniMod:4)SAC(UniMod:4)NVWR2	5293.98	5041.72	
A0A8I6GBQ0	A0A8I6GBQ0	A0A8I6GBQ0_RAT	Stk26	Protein kinase domain-containing protein	1	CSADESP	C(UniMod:4)SADESP	1	C(UniMod:4)SADESP1	13986.5	17020.5	10783.2
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	CSAHTSNCVCLLPPQCPK	C(UniMod:4)SAHTSNC(UniMod:4)VC(UniMod:4)LLPPQC(UniMod:4)PK	3	C(UniMod:4)SAHTSNC(UniMod:4)VC(UniMod:4)LLPPQC(UniMod:4)PK3		13679.5	9743.43
B0BN94	B0BN94	F136A_RAT	Fam136a	Protein FAM136A	1	CSANCCEDNQASMQQVHQCIER	C(UniMod:4)SANC(UniMod:4)C(UniMod:4)EDNQASMQQVHQC(UniMod:4)IER	3	C(UniMod:4)SANC(UniMod:4)C(UniMod:4)EDNQASMQQVHQC(UniMod:4)IER3	4379.94	6597.89	3425.41
D3ZYR1	D3ZYR1	FCHO2_RAT	Fcho2	F-BAR domain only protein 2	1	CSASTTDLR	C(UniMod:4)SASTTDLR	2	C(UniMod:4)SASTTDLR2	23203.8	21477.1	40042.6
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	CSASVPANPGVCGNCGENVYQCHK	C(UniMod:4)SASVPANPGVC(UniMod:4)GNC(UniMod:4)GENVYQC(UniMod:4)HK	3	C(UniMod:4)SASVPANPGVC(UniMod:4)GNC(UniMod:4)GENVYQC(UniMod:4)HK3	13914.3	15335.4	10565.3
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	CSATGNPTPTLEWIGGPSGQLPTK	C(UniMod:4)SATGNPTPTLEWIGGPSGQLPTK	3	C(UniMod:4)SATGNPTPTLEWIGGPSGQLPTK3	16728	18476.7	21443
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	CSATITGK	C(UniMod:4)SATITGK	2	C(UniMod:4)SATITGK2	16201.1	16064.7	14733.2
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	CSCAAGFLLAADGK	C(UniMod:4)SC(UniMod:4)AAGFLLAADGK	2	C(UniMod:4)SC(UniMod:4)AAGFLLAADGK2	161236	208840	181892
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	CSCAAGFLLAADGK	C(UniMod:4)SC(UniMod:4)AAGFLLAADGK	3	C(UniMod:4)SC(UniMod:4)AAGFLLAADGK3	13663.7	21377.7	28780.2
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	CSCDPGYELAPDK	C(UniMod:4)SC(UniMod:4)DPGYELAPDK	2	C(UniMod:4)SC(UniMod:4)DPGYELAPDK2	15400	12687.8	8905.61
O35806	O35806	LTBP2_RAT	Ltbp2	Latent-transforming growth factor beta-binding protein 2	1	CSCEPGYELTPDK	C(UniMod:4)SC(UniMod:4)EPGYELTPDK	2	C(UniMod:4)SC(UniMod:4)EPGYELTPDK2	11281.3	10460	12281.7
O35806	O35806	LTBP2_RAT	Ltbp2	Latent-transforming growth factor beta-binding protein 2	1	CSCEPGYELTPDKK	C(UniMod:4)SC(UniMod:4)EPGYELTPDKK	3	C(UniMod:4)SC(UniMod:4)EPGYELTPDKK3	5138.3	3541.19	
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	CSCKPGVMGDK	C(UniMod:4)SC(UniMod:4)KPGVMGDK	2	C(UniMod:4)SC(UniMod:4)KPGVMGDK2	9758.78	10370.7	13064.2
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	CSCKPGVMGDK	C(UniMod:4)SC(UniMod:4)KPGVMGDK	3	C(UniMod:4)SC(UniMod:4)KPGVMGDK3	51442.2	43860.3	45690.6
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	CSCPLLPPR	C(UniMod:4)SC(UniMod:4)PLLPPR	2	C(UniMod:4)SC(UniMod:4)PLLPPR2	46057.4	32240.1	45450.5
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	CSCPPGTR	C(UniMod:4)SC(UniMod:4)PPGTR	2	C(UniMod:4)SC(UniMod:4)PPGTR2			20347.3
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CSCSPGWIGDGIK	C(UniMod:4)SC(UniMod:4)SPGWIGDGIK	2	C(UniMod:4)SC(UniMod:4)SPGWIGDGIK2	63871.5	67741.9	70229.6
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	CSCSSGEPYFGYWGALK	C(UniMod:4)SC(UniMod:4)SSGEPYFGYWGALK	3	C(UniMod:4)SC(UniMod:4)SSGEPYFGYWGALK3	11053.2	12672.3	11005.7
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CSCYEGWVLEPDGESCR	C(UniMod:4)SC(UniMod:4)YEGWVLEPDGESC(UniMod:4)R	3	C(UniMod:4)SC(UniMod:4)YEGWVLEPDGESC(UniMod:4)R3	33438.2	40246.8	46039.9
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	CSDATLLSSLLEEMK	C(UniMod:4)SDATLLSSLLEEMK	2	C(UniMod:4)SDATLLSSLLEEMK2	32778.9	43414.4	29200.1
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	CSDATLLSSLLEEMK	C(UniMod:4)SDATLLSSLLEEMK	3	C(UniMod:4)SDATLLSSLLEEMK3		6564.77	
Q03070	Q03070	CHIO_RAT	Chn2	Beta-chimaerin	1	CSDCGLNVHK	C(UniMod:4)SDC(UniMod:4)GLNVHK	3	C(UniMod:4)SDC(UniMod:4)GLNVHK3	7227.27	6190.62	7073.52
Q99NA5	Q99NA5	IDH3A_RAT	Idh3a	Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial	1	CSDFTEEICR	C(UniMod:4)SDFTEEIC(UniMod:4)R	2	C(UniMod:4)SDFTEEIC(UniMod:4)R2	43303.8	34530.8	51790.6
Q99NA5	Q99NA5	IDH3A_RAT	Idh3a	Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial	1	CSDFTEEICRR	C(UniMod:4)SDFTEEIC(UniMod:4)RR	3	C(UniMod:4)SDFTEEIC(UniMod:4)RR3	46627.3	53134.3	41406.4
A0A0G2JTB2	A0A0G2JTB2	A0A0G2JTB2_RAT	Gbe1	1,4-alpha-glucan branching enzyme	1	CSDGGIYCK	C(UniMod:4)SDGGIYC(UniMod:4)K	2	C(UniMod:4)SDGGIYC(UniMod:4)K2		2511.84	
D4A3M8	B2RZ33;D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	0	CSDGWWR	C(UniMod:4)SDGWWR	2	C(UniMod:4)SDGWWR2	56298.3	62400.7	57619.3
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	CSDILNEIK	C(UniMod:4)SDILNEIK	2	C(UniMod:4)SDILNEIK2	16742.8	20627.5	12039.1
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	CSDILNEIKDR	C(UniMod:4)SDILNEIKDR	2	C(UniMod:4)SDILNEIKDR2	17751.6	15876.6	13294.1
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	CSDILNEIKDR	C(UniMod:4)SDILNEIKDR	3	C(UniMod:4)SDILNEIKDR3	236019	223998	223194
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	CSDIVFAR	C(UniMod:4)SDIVFAR	2	C(UniMod:4)SDIVFAR2	22808.6	24379.2	24990.5
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	CSEAFVR	C(UniMod:4)SEAFVR	2	C(UniMod:4)SEAFVR2	8408.32	13757.1	21031.3
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	CSEAFVRDPSK	C(UniMod:4)SEAFVRDPSK	3	C(UniMod:4)SEAFVRDPSK3	19598.6	17825.1	29896.2
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	CSECLPNTWGHSIVTGCK	C(UniMod:4)SEC(UniMod:4)LPNTWGHSIVTGC(UniMod:4)K	3	C(UniMod:4)SEC(UniMod:4)LPNTWGHSIVTGC(UniMod:4)K3	16980.3	23036.8	30631.6
A0A8I6GIQ1	A0A8I6GIQ1	A0A8I6GIQ1_RAT	Tmem50a	Transmembrane protein 50A	1	CSECMDWGEK	C(UniMod:4)SEC(UniMod:4)MDWGEK	2	C(UniMod:4)SEC(UniMod:4)MDWGEK2	3301.14	5301.82	6361.82
A0A8I6GIQ1	A0A8I6GIQ1	A0A8I6GIQ1_RAT	Tmem50a	Transmembrane protein 50A	1	CSECMDWGEKR	C(UniMod:4)SEC(UniMod:4)MDWGEKR	3	C(UniMod:4)SEC(UniMod:4)MDWGEKR3	9559.01	3392.5	6327.95
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	CSEDNYVTSAYQWMVPFLHR	C(UniMod:4)SEDNYVTSAYQWMVPFLHR	3	C(UniMod:4)SEDNYVTSAYQWMVPFLHR3	3802.32	3349.71	3134.75
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	CSEITFQTTK	C(UniMod:4)SEITFQTTK	2	C(UniMod:4)SEITFQTTK2	19370	6288	20316
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	CSESFTLLEK	C(UniMod:4)SESFTLLEK	2	C(UniMod:4)SESFTLLEK2	19577.8	23263.7	16936.3
A0A8I6AL43	A0A8I6AL43	A0A8I6AL43_RAT	Ate1	Arginyl-tRNA--protein transferase 1	1	CSETMLLFR	C(UniMod:4)SETMLLFR	2	C(UniMod:4)SETMLLFR2	4928.7	3679.24	2581.88
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	CSEVAQLTAGMSGR	C(UniMod:4)SEVAQLTAGMSGR	2	C(UniMod:4)SEVAQLTAGMSGR2	20158	20383.7	9941.86
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	CSFDVVK	C(UniMod:4)SFDVVK	2	C(UniMod:4)SFDVVK2	51101.7	77707.4	47291.3
P16296	P16296;Q8K3U6	FA9_RAT	F9	Coagulation factor IX	0	CSFEEAR	C(UniMod:4)SFEEAR	2	C(UniMod:4)SFEEAR2	35755.5	37525.8	32020.3
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	CSFSCNCHTSPCLQDSGR	C(UniMod:4)SFSC(UniMod:4)NC(UniMod:4)HTSPC(UniMod:4)LQDSGR	3	C(UniMod:4)SFSC(UniMod:4)NC(UniMod:4)HTSPC(UniMod:4)LQDSGR3	43467.3	26681	26521.2
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	CSGALTVSSSK	C(UniMod:4)SGALTVSSSK	2	C(UniMod:4)SGALTVSSSK2	6141.38	5439.9	
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	CSGEKEVNLAVENAK	C(UniMod:4)SGEKEVNLAVENAK	3	C(UniMod:4)SGEKEVNLAVENAK3	3570.99	5312.17	7156.63
Q2TA63	Q2TA63	TM147_RAT	Tmem147	BOS complex subunit TMEM147	1	CSGLSEYNAFWK	C(UniMod:4)SGLSEYNAFWK	2	C(UniMod:4)SGLSEYNAFWK2	2640.7	6278.35	3735.2
D3ZGB8	D3ZGB8	D3ZGB8_RAT	Cilp	Cartilage intermediate layer protein	1	CSGMLYDQDR	C(UniMod:4)SGMLYDQDR	2	C(UniMod:4)SGMLYDQDR2	8594.43	3987.34	4719.63
D3ZGB8	D3ZGB8	D3ZGB8_RAT	Cilp	Cartilage intermediate layer protein	1	CSGMLYDQDRVDR	C(UniMod:4)SGMLYDQDRVDR	3	C(UniMod:4)SGMLYDQDRVDR3	17083.4	27659	16076.9
A0A8I6A6H8	A0A8I6A6H8	A0A8I6A6H8_RAT	Serpinb6a	Serpin family B member 6A	1	CSGNGGGDVHQGFQSLLAEVNK	C(UniMod:4)SGNGGGDVHQGFQSLLAEVNK	3	C(UniMod:4)SGNGGGDVHQGFQSLLAEVNK3	18847.6	10779.8	7824.53
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	CSGPGLER	C(UniMod:4)SGPGLER	2	C(UniMod:4)SGPGLER2	3.11404e+06	2.59473e+06	3.37905e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	CSGPGLSPGMVR	C(UniMod:4)SGPGLSPGMVR	2	C(UniMod:4)SGPGLSPGMVR2	3.84639e+06	3.92832e+06	4.3086e+06
D4A9Y0	D4A9Y0	D4A9Y0_RAT	Sdf2l1	Stromal cell-derived factor 2-like 1	1	CSGQHWER	C(UniMod:4)SGQHWER	2	C(UniMod:4)SGQHWER2	2502.09		4301.65
P58751	P58751	RELN_RAT	Reln	Reelin	1	CSGTVSQPSVFFPTK	C(UniMod:4)SGTVSQPSVFFPTK	2	C(UniMod:4)SGTVSQPSVFFPTK2	54626.4	79244.2	78556.2
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	CSIHLQLQGLVDPAR	C(UniMod:4)SIHLQLQGLVDPAR	3	C(UniMod:4)SIHLQLQGLVDPAR3	47086.5	42577.9	31181.3
P86411	P86411	RGPA2_RAT	Ralgapa2	Ral GTPase-activating protein subunit alpha-2	1	CSILANER	C(UniMod:4)SILANER	2	C(UniMod:4)SILANER2	4710.13	5952.81	2097.55
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	CSILDCDLK	C(UniMod:4)SILDC(UniMod:4)DLK	2	C(UniMod:4)SILDC(UniMod:4)DLK2	46773.4	49997.2	43406.2
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	CSILMLADSETER	C(UniMod:4)SILMLADSETER	2	C(UniMod:4)SILMLADSETER2	17988.1	36169.8	21758.8
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	CSISGHGSLNSISR	C(UniMod:4)SISGHGSLNSISR	3	C(UniMod:4)SISGHGSLNSISR3			4739.84
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	CSKESNAELTADCETKR	C(UniMod:4)SKESNAELTADC(UniMod:4)ETKR	3	C(UniMod:4)SKESNAELTADC(UniMod:4)ETKR3			4106.71
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	CSKESNAELTADCETKR	C(UniMod:4)SKESNAELTADC(UniMod:4)ETKR	4	C(UniMod:4)SKESNAELTADC(UniMod:4)ETKR4	4065.01	12304.3	13996.4
Q63515	Q63515	C4BPB_RAT	C4bpb	C4b-binding protein beta chain	1	CSLEMKK	C(UniMod:4)SLEMKK	2	C(UniMod:4)SLEMKK2	4886.04	3896.89	2894.48
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	CSLEPCDFPQFK	C(UniMod:4)SLEPC(UniMod:4)DFPQFK	2	C(UniMod:4)SLEPC(UniMod:4)DFPQFK2	595832	485271	432033
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	CSLEPCDFPQFK	C(UniMod:4)SLEPC(UniMod:4)DFPQFK	3	C(UniMod:4)SLEPC(UniMod:4)DFPQFK3	8838.07	7961.14	9960.87
Q5U2Q4	Q5U2Q4	PAR16_RAT	Parp16	Protein mono-ADP-ribosyltransferase PARP16	1	CSLFASALQSYK	C(UniMod:4)SLFASALQSYK	2	C(UniMod:4)SLFASALQSYK2	7250.4	4035.43	8921.49
G3V9R2	Q5FVP9;G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	0	CSLKPCDFPQFK	C(UniMod:4)SLKPC(UniMod:4)DFPQFK	2	C(UniMod:4)SLKPC(UniMod:4)DFPQFK2	38031.7	24120.8	45734.4
G3V9R2	Q5FVP9;G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	0	CSLKPCDFPQFK	C(UniMod:4)SLKPC(UniMod:4)DFPQFK	3	C(UniMod:4)SLKPC(UniMod:4)DFPQFK3	331787	297316	246920
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	CSLLEEELGATHK	C(UniMod:4)SLLEEELGATHK	3	C(UniMod:4)SLLEEELGATHK3	18171.9	10463	12584.1
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	CSLLHSNLSVK	C(UniMod:4)SLLHSNLSVK	2	C(UniMod:4)SLLHSNLSVK2	17589.2	9480.28	11000.4
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	CSLLHSNLSVK	C(UniMod:4)SLLHSNLSVK	3	C(UniMod:4)SLLHSNLSVK3	104243	116273	139028
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	CSLLQSK	C(UniMod:4)SLLQSK	2	C(UniMod:4)SLLQSK2	10104.2	13721	12300.2
P68403	P68403	KPCB_RAT	Prkcb	Protein kinase C beta type	1	CSLNPEWNETFR	C(UniMod:4)SLNPEWNETFR	2	C(UniMod:4)SLNPEWNETFR2	7757.23	11380	4992.44
G3V9L1	G3V9L1	G3V9L1_RAT	Tex2	Testis expressed 2	1	CSLSALVSK	C(UniMod:4)SLSALVSK	2	C(UniMod:4)SLSALVSK2	8226.7	6086.51	6478.59
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	CSLSPVSGDTDGSCK	C(UniMod:4)SLSPVSGDTDGSC(UniMod:4)K	2	C(UniMod:4)SLSPVSGDTDGSC(UniMod:4)K2	6340.85	7566.25	8456.31
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	CSMNTEDGAK	C(UniMod:4)SMNTEDGAK	2	C(UniMod:4)SMNTEDGAK2	3735.58		64375.7
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	CSNDSFSVIADYFGR	C(UniMod:4)SNDSFSVIADYFGR	2	C(UniMod:4)SNDSFSVIADYFGR2	8212.04	18220.9	11153.6
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	CSNEAVFAADFHPTDTNIIVTCGK	C(UniMod:4)SNEAVFAADFHPTDTNIIVTC(UniMod:4)GK	3	C(UniMod:4)SNEAVFAADFHPTDTNIIVTC(UniMod:4)GK3	36713.6	29704.9	37391
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	CSNEAVLVATFHPTDPNLLITCGK	C(UniMod:4)SNEAVLVATFHPTDPNLLITC(UniMod:4)GK	3	C(UniMod:4)SNEAVLVATFHPTDPNLLITC(UniMod:4)GK3	17159	17182.6	9618.71
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	CSNEEVTGMIQAGDTSK	C(UniMod:4)SNEEVTGMIQAGDTSK	2	C(UniMod:4)SNEEVTGMIQAGDTSK2	54348.6	60745.1	47600.2
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	CSNEEVTGMIQAGDTSK	C(UniMod:4)SNEEVTGMIQAGDTSK	3	C(UniMod:4)SNEEVTGMIQAGDTSK3	24304.9	23157.9	17460.2
B2RZ77	B2RZ77	B2RZ77_RAT	Dpt	Dermatopontin	1	CSNNGLVAGFQSR	C(UniMod:4)SNNGLVAGFQSR	2	C(UniMod:4)SNNGLVAGFQSR2	447844	388690	432414
B2RZ77	B2RZ77	B2RZ77_RAT	Dpt	Dermatopontin	1	CSNNGLVAGFQSR	C(UniMod:4)SNNGLVAGFQSR	3	C(UniMod:4)SNNGLVAGFQSR3	23976.6	11956.8	24549.8
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	CSNPLDTSVK	C(UniMod:4)SNPLDTSVK	2	C(UniMod:4)SNPLDTSVK2	216326	255591	215995
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CSNQLPQSITK	C(UniMod:4)SNQLPQSITK	2	C(UniMod:4)SNQLPQSITK2	24716.8	28565.5	11568.9
Q5FVQ9	Q5FVQ9	TBCE_RAT	Tbce	Tubulin-specific chaperone E	1	CSNQPEQQILEK	C(UniMod:4)SNQPEQQILEK	2	C(UniMod:4)SNQPEQQILEK2	7095.01	4932.53	3635.04
D3ZJD8	D3ZJD8	D3ZJD8_RAT	Clec1b	C-type lectin domain family 1 member B	1	CSPCATK	C(UniMod:4)SPC(UniMod:4)ATK	1	C(UniMod:4)SPC(UniMod:4)ATK1			3394.31
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	CSPESIEFPVSEAQILEALPLSSK	C(UniMod:4)SPESIEFPVSEAQILEALPLSSK	3	C(UniMod:4)SPESIEFPVSEAQILEALPLSSK3	1.12298e+06	1.12164e+06	1.37463e+06
P0C1S9	P0C1S9	DGLB_RAT	Daglb	Diacylglycerol lipase-beta	1	CSPGYCSGDSPLDSPK	C(UniMod:4)SPGYC(UniMod:4)SGDSPLDSPK	2	C(UniMod:4)SPGYC(UniMod:4)SGDSPLDSPK2	15386.2	10431.6	16033.5
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	CSPPETLASTPDSGYSIDSK	C(UniMod:4)SPPETLASTPDSGYSIDSK	3	C(UniMod:4)SPPETLASTPDSGYSIDSK3	7399.78	9587.01	4849.26
Q3KR59	Q3KR59	UBP10_RAT	Usp10	Ubiquitin carboxyl-terminal hydrolase 10	1	CSPPVPSPLASEK	C(UniMod:4)SPPVPSPLASEK	2	C(UniMod:4)SPPVPSPLASEK2	18818.6		15972.3
P03994	P03994	HPLN1_RAT	Hapln1	Hyaluronan and proteoglycan link protein 1	1	CSPTEAAVR	C(UniMod:4)SPTEAAVR	2	C(UniMod:4)SPTEAAVR2	43017.3	31162.4	31839.2
A0A8I6A9R8	A0A8I6A9R8	A0A8I6A9R8_RAT	Cope	Coatomer subunit epsilon	1	CSPTLLLLNGQAACHSAQGR	C(UniMod:4)SPTLLLLNGQAAC(UniMod:4)HSAQGR	3	C(UniMod:4)SPTLLLLNGQAAC(UniMod:4)HSAQGR3	41728.8	42240.9	40292.6
P47875	P47875	CSRP1_RAT	Csrp1	Cysteine and glycine-rich protein 1	1	CSQAVYAAEK	C(UniMod:4)SQAVYAAEK	2	C(UniMod:4)SQAVYAAEK2	220791	252330	215653
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	CSQFCTTGMDGGMSIWDVK	C(UniMod:4)SQFC(UniMod:4)TTGMDGGMSIWDVK	3	C(UniMod:4)SQFC(UniMod:4)TTGMDGGMSIWDVK3	26856.1	24926.2	30384.3
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	CSQISLSQSTR	C(UniMod:4)SQISLSQSTR	2	C(UniMod:4)SQISLSQSTR2	54122.3	49285.2	42003.2
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	CSQPENINNGK	C(UniMod:4)SQPENINNGK	2	C(UniMod:4)SQPENINNGK2	35589.3		
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	CSQPLAR	C(UniMod:4)SQPLAR	2	C(UniMod:4)SQPLAR2		1.28753e+06	
A0A0G2JXT6	A0A0G2JXT6	MTMR6_RAT	Mtmr6	Myotubularin-related protein 6	1	CSQPLSGFSAR	C(UniMod:4)SQPLSGFSAR	2	C(UniMod:4)SQPLSGFSAR2	4311.09		3584.08
Q6AXQ4	Q6AXQ4	MTM1_RAT	Mtm1	Myotubularin	1	CSQPLVGVGGK	C(UniMod:4)SQPLVGVGGK	2	C(UniMod:4)SQPLVGVGGK2	10407.7	8505.65	12627.8
A0A8I5ZTB8	A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	CSQPMVGVSGK	C(UniMod:4)SQPMVGVSGK	2	C(UniMod:4)SQPMVGVSGK2	31461.9	39633	39664.2
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	CSQPSGTCLNGGR	C(UniMod:4)SQPSGTC(UniMod:4)LNGGR	2	C(UniMod:4)SQPSGTC(UniMod:4)LNGGR2	24049.3	24349.5	34450.6
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	CSQTLTK	C(UniMod:4)SQTLTK	2	C(UniMod:4)SQTLTK2			5403.78
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	CSRFQSEIK	C(UniMod:4)SRFQSEIK	2	C(UniMod:4)SRFQSEIK2	47482.2	42353.1	34603.8
Q5FVL6	Q5FVL6	TSN13_RAT	Tspan13	Tetraspanin-13	1	CSSCAPIIGEYAGEVLR	C(UniMod:4)SSC(UniMod:4)APIIGEYAGEVLR	2	C(UniMod:4)SSC(UniMod:4)APIIGEYAGEVLR2	19502.3	9041.46	9199.82
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	CSSEGAHLEHAELQDQLHR	C(UniMod:4)SSEGAHLEHAELQDQLHR	3	C(UniMod:4)SSEGAHLEHAELQDQLHR3	5779.27	11964.4	8190.13
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	CSSEGAHLEHAELQDQLHR	C(UniMod:4)SSEGAHLEHAELQDQLHR	4	C(UniMod:4)SSEGAHLEHAELQDQLHR4	29933.8	35109.9	36728.9
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	CSSEPPVVTDEAEDLK	C(UniMod:4)SSEPPVVTDEAEDLK	2	C(UniMod:4)SSEPPVVTDEAEDLK2	8167.26	18292.4	7942.05
Q1EHB3	Q1EHB3	ATS7_RAT	Adamts7	A disintegrin and metalloproteinase with thrombospondin motifs 7	1	CSSGNDEDCTLSSRPQPAR	C(UniMod:4)SSGNDEDC(UniMod:4)TLSSRPQPAR	3	C(UniMod:4)SSGNDEDC(UniMod:4)TLSSRPQPAR3	3877.81	5735.48	
F1LS35	F1LS35	F1LS35_RAT	Hps5	Hermansky-Pudlak syndrome 5 protein homolog	1	CSSIAVSR	C(UniMod:4)SSIAVSR	2	C(UniMod:4)SSIAVSR2	3491.56		2020.19
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	CSSILLHGK	C(UniMod:4)SSILLHGK	2	C(UniMod:4)SSILLHGK2	17346.4	9799.02	8842.18
G3V6U9	G3V6U9;A0A8I6GIR7	SETD3_RAT	Setd3	Actin-histidine N-methyltransferase	0	CSSPAPGPGK	C(UniMod:4)SSPAPGPGK	2	C(UniMod:4)SSPAPGPGK2			3584.44
G3V6U9	G3V6U9	SETD3_RAT	Setd3	Actin-histidine N-methyltransferase	1	CSSPAPGPGKEWEEYTQIR	C(UniMod:4)SSPAPGPGKEWEEYTQIR	3	C(UniMod:4)SSPAPGPGKEWEEYTQIR3	9841.03		
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	CSSPEVYGADISPNMLCAGYFDCK	C(UniMod:4)SSPEVYGADISPNMLC(UniMod:4)AGYFDC(UniMod:4)K	3	C(UniMod:4)SSPEVYGADISPNMLC(UniMod:4)AGYFDC(UniMod:4)K3	16126.5	17444.7	26544.9
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	CSSPVDMDHSNAEGGQSPGPEK	C(UniMod:4)SSPVDMDHSNAEGGQSPGPEK	3	C(UniMod:4)SSPVDMDHSNAEGGQSPGPEK3	7863	2564.37	5611.84
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	CSSQYDYDK	C(UniMod:4)SSQYDYDK	2	C(UniMod:4)SSQYDYDK2	4566.26	2967.15	3059.56
Q66H72	Q66H72	Q66H72_RAT	Slc37a1	Solute carrier family 37 (Glycerol-3-phosphate transporter), member 1	1	CSSTLPTHPR	C(UniMod:4)SSTLPTHPR	3	C(UniMod:4)SSTLPTHPR3	9220.59	5739.31	4067.05
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	CSSTNLVLTGSVER	C(UniMod:4)SSTNLVLTGSVER	2	C(UniMod:4)SSTNLVLTGSVER2	8708.31	11738.9	14175.3
B1WC42	B1WC42	B1WC42_RAT	Trip6	Thyroid hormone receptor interactor 6	1	CSTCSEPILDR	C(UniMod:4)STC(UniMod:4)SEPILDR	2	C(UniMod:4)STC(UniMod:4)SEPILDR2	4153.78	4967.96	4759.04
Q3B7D0	Q3B7D0	HEM6_RAT	Cpox	Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial	1	CSTFMSSPVTELR	C(UniMod:4)STFMSSPVTELR	2	C(UniMod:4)STFMSSPVTELR2	6100.26	1750.61	5265.86
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	CSTNFMSSTK	C(UniMod:4)STNFMSSTK	2	C(UniMod:4)STNFMSSTK2	6880.23	8331.76	8460.84
Q7M0E3	D4A315;Q7M0E3	DEST_RAT	Dstn	Destrin	0	CSTPEEIK	C(UniMod:4)STPEEIK	2	C(UniMod:4)STPEEIK2	153367	134933	133227
Q7M0E3	D4A315;Q7M0E3	DEST_RAT	Dstn	Destrin	0	CSTPEEIKK	C(UniMod:4)STPEEIKK	2	C(UniMod:4)STPEEIKK2	41373.4		33630.4
A0A8I5ZYD8	A0A8I5ZYD8	A0A8I5ZYD8_RAT	Fhl3	Four and a half LIM domains 3	1	CSTSLVGQGFVPDGDQVLCQGCSQAGP	C(UniMod:4)STSLVGQGFVPDGDQVLC(UniMod:4)QGC(UniMod:4)SQAGP	3	C(UniMod:4)STSLVGQGFVPDGDQVLC(UniMod:4)QGC(UniMod:4)SQAGP3	10410.7	12761.5	5330.01
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	CSVALLFR	C(UniMod:4)SVALLFR	2	C(UniMod:4)SVALLFR2	4664.61	3470.28	7411.95
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	CSVASIK	C(UniMod:4)SVASIK	2	C(UniMod:4)SVASIK2	64360.2	63891	44769.4
Q5XI07	Q5XI07	LPP_RAT	Lpp	Lipoma-preferred partner homolog	1	CSVCKEPIMPAPGQEETVR	C(UniMod:4)SVC(UniMod:4)KEPIMPAPGQEETVR	3	C(UniMod:4)SVC(UniMod:4)KEPIMPAPGQEETVR3	20705.1	14204.7	21937.5
O08623	O08623	SQSTM_RAT	Sqstm1	Sequestosome-1	1	CSVCPDYDLCSVCEGK	C(UniMod:4)SVC(UniMod:4)PDYDLC(UniMod:4)SVC(UniMod:4)EGK	2	C(UniMod:4)SVC(UniMod:4)PDYDLC(UniMod:4)SVC(UniMod:4)EGK2	34316.1	31671	34300.7
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	CSVCSEPIMPEPGR	C(UniMod:4)SVC(UniMod:4)SEPIMPEPGR	2	C(UniMod:4)SVC(UniMod:4)SEPIMPEPGR2	17417.4	16824.7	14230.9
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	CSVCSEPIMPEPGRDETVR	C(UniMod:4)SVC(UniMod:4)SEPIMPEPGRDETVR	3	C(UniMod:4)SVC(UniMod:4)SEPIMPEPGRDETVR3	1.07447e+06	1.07224e+06	1.20628e+06
P08649	P08649	CO4_RAT	C4	Complement C4	1	CSVFYAAPTK	C(UniMod:4)SVFYAAPTK	2	C(UniMod:4)SVFYAAPTK2	1.70744e+07	1.72142e+07	1.9699e+07
P08649	P08649	CO4_RAT	C4	Complement C4	1	CSVFYAAPTK	C(UniMod:4)SVFYAAPTK	3	C(UniMod:4)SVFYAAPTK3	25160.7	37901.6	33678.1
P08649	P08649	CO4_RAT	C4	Complement C4	1	CSVFYAAPTKSK	C(UniMod:4)SVFYAAPTKSK	2	C(UniMod:4)SVFYAAPTKSK2	1882.31	9286.98	4049.51
P08649	P08649	CO4_RAT	C4	Complement C4	1	CSVFYAAPTKSK	C(UniMod:4)SVFYAAPTKSK	3	C(UniMod:4)SVFYAAPTKSK3	39548.8	57201.1	47890.6
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	CSVFYAGPTK	C(UniMod:4)SVFYAGPTK	2	C(UniMod:4)SVFYAGPTK2	8.40443e+06	8.43888e+06	8.56757e+06
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	CSVFYAGPTKSK	C(UniMod:4)SVFYAGPTKSK	3	C(UniMod:4)SVFYAGPTKSK3	5734.46	2505.64	3237.78
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	CSVLNEK	C(UniMod:4)SVLNEK	1	C(UniMod:4)SVLNEK1	1767.44	2917.65	2715.84
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	CSVLNEK	C(UniMod:4)SVLNEK	2	C(UniMod:4)SVLNEK2	105990	107896	89451.3
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	CSVNATPQQMPQAEK	C(UniMod:4)SVNATPQQMPQAEK	2	C(UniMod:4)SVNATPQQMPQAEK2	11285.8	6484.96	6193.18
Q6AYD4	Q6AYD4	ESAM_RAT	Esam	Endothelial cell-selective adhesion molecule	1	CSVNAYDSDGK	C(UniMod:4)SVNAYDSDGK	2	C(UniMod:4)SVNAYDSDGK2	70874	56122.7	76453.7
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	CSVNLANK	C(UniMod:4)SVNLANK	1	C(UniMod:4)SVNLANK1	2052.18	2321.95	4000.76
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	CSVNLANK	C(UniMod:4)SVNLANK	2	C(UniMod:4)SVNLANK2	168978	171300	170687
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	CSVNLANKR	C(UniMod:4)SVNLANKR	2	C(UniMod:4)SVNLANKR2	8699.93		4827.61
A0A096MK24	A0A096MK24	A0A096MK24_RAT	Morc4	Microrchidia 4	1	CSVPEEQER	C(UniMod:4)SVPEEQER	2	C(UniMod:4)SVPEEQER2	3202.69		
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	CSVQVAHLAQEFPEIIIQK	C(UniMod:4)SVQVAHLAQEFPEIIIQK	3	C(UniMod:4)SVQVAHLAQEFPEIIIQK3	8038.66	10748.9	10858.1
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	CSVSLSNVEAR	C(UniMod:4)SVSLSNVEAR	2	C(UniMod:4)SVSLSNVEAR2	34615.6	45510.2	40657.9
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	CSVSNDLTQQEIR	C(UniMod:4)SVSNDLTQQEIR	2	C(UniMod:4)SVSNDLTQQEIR2	10623.7	11499.3	14509.6
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	CSVTCEDGQFFSGHDCQPCHR	C(UniMod:4)SVTC(UniMod:4)EDGQFFSGHDC(UniMod:4)QPC(UniMod:4)HR	3	C(UniMod:4)SVTC(UniMod:4)EDGQFFSGHDC(UniMod:4)QPC(UniMod:4)HR3	14513.9	13837.6	19782.8
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	CSVTCEDGQFFSGHDCQPCHR	C(UniMod:4)SVTC(UniMod:4)EDGQFFSGHDC(UniMod:4)QPC(UniMod:4)HR	4	C(UniMod:4)SVTC(UniMod:4)EDGQFFSGHDC(UniMod:4)QPC(UniMod:4)HR4	134458	165511	156257
P62882	P62882	GNB5_RAT	Gnb5	Guanine nucleotide-binding protein subunit beta-5	1	CSVYPLTFDK	C(UniMod:4)SVYPLTFDK	2	C(UniMod:4)SVYPLTFDK2	3829.82	4371.04	9245.72
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	CSWLVPLVR	C(UniMod:4)SWLVPLVR	2	C(UniMod:4)SWLVPLVR2	272871	304797	247018
P05369	P05369	FPPS_RAT	Fdps	Farnesyl pyrophosphate synthase	1	CSWLVVQCLLR	C(UniMod:4)SWLVVQC(UniMod:4)LLR	2	C(UniMod:4)SWLVVQC(UniMod:4)LLR2	50287.6	35298.7	29466.2
A0A8I5ZMX2	A0A8I5ZMX2	A0A8I5ZMX2_RAT	Adamts3	ADAM metallopeptidase with thrombospondin type 1, motif 3	1	CSYKDPYSICVR	C(UniMod:4)SYKDPYSIC(UniMod:4)VR	3	C(UniMod:4)SYKDPYSIC(UniMod:4)VR3	2827.69	6616.35	6579.9
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	CSYNVIEK	C(UniMod:4)SYNVIEK	2	C(UniMod:4)SYNVIEK2	18193.2	26507	23954.6
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	CSYQPTMEGVHTVHVTFAGVPIPR	C(UniMod:4)SYQPTMEGVHTVHVTFAGVPIPR	3	C(UniMod:4)SYQPTMEGVHTVHVTFAGVPIPR3	995339	933563	968180
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	CSYQPTMEGVHTVHVTFAGVPIPR	C(UniMod:4)SYQPTMEGVHTVHVTFAGVPIPR	4	C(UniMod:4)SYQPTMEGVHTVHVTFAGVPIPR4	3.21112e+06	3.1613e+06	3.40536e+06
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	CSYTEEAQCIDGTIEIPK	C(UniMod:4)SYTEEAQC(UniMod:4)IDGTIEIPK	3	C(UniMod:4)SYTEEAQC(UniMod:4)IDGTIEIPK3	412076	401019	405575
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	CTACEPGYTGQYCEQCAPGYEGNPNVQGGR	C(UniMod:4)TAC(UniMod:4)EPGYTGQYC(UniMod:4)EQC(UniMod:4)APGYEGNPNVQGGR	4	C(UniMod:4)TAC(UniMod:4)EPGYTGQYC(UniMod:4)EQC(UniMod:4)APGYEGNPNVQGGR4	505.822	1944.27	
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	CTAEGWSPK	C(UniMod:4)TAEGWSPK	2	C(UniMod:4)TAEGWSPK2	10050.8	9408.43	11265.2
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	CTAEGWSPKPR	C(UniMod:4)TAEGWSPKPR	2	C(UniMod:4)TAEGWSPKPR2	2566.32		
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	CTAEGWSPKPR	C(UniMod:4)TAEGWSPKPR	3	C(UniMod:4)TAEGWSPKPR3	32879.6	46342.4	43816.8
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	CTANNLLGK	C(UniMod:4)TANNLLGK	2	C(UniMod:4)TANNLLGK2		13331.3	13376.7
A0A8I6G3S1	A0A8I6G3S1	A0A8I6G3S1_RAT	Mon1b	Vacuolar fusion protein MON1 homolog	1	CTAPGLALSVLAVGGR	C(UniMod:4)TAPGLALSVLAVGGR	2	C(UniMod:4)TAPGLALSVLAVGGR2		2891.27	5366.65
D3ZLX3	D3ZLX3	D3ZLX3_RAT	Mob2	MOB kinase activator 2	1	CTAPQYVDFVMSSVQK	C(UniMod:4)TAPQYVDFVMSSVQK	3	C(UniMod:4)TAPQYVDFVMSSVQK3		2327.07	6985.7
D3ZTD8	D3ZTD8	SEM5A_RAT	Sema5a	Semaphorin-5A	1	CTAQCGGGIQAR	C(UniMod:4)TAQC(UniMod:4)GGGIQAR	2	C(UniMod:4)TAQC(UniMod:4)GGGIQAR2	1937.33	894.518	
D3ZHK4	D3ZHK4	D3ZHK4_RAT	Rb1cc1	RB1-inducible coiled-coil 1	1	CTAVEIR	C(UniMod:4)TAVEIR	2	C(UniMod:4)TAVEIR2	2895.05	3206.46	
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	CTCGQGYQLSAAK	C(UniMod:4)TC(UniMod:4)GQGYQLSAAK	2	C(UniMod:4)TC(UniMod:4)GQGYQLSAAK2	241110	257868	328181
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	CTCGQGYQLSAAK	C(UniMod:4)TC(UniMod:4)GQGYQLSAAK	3	C(UniMod:4)TC(UniMod:4)GQGYQLSAAK3	4243.49	4773.15	
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	CTCLQGWWGPECSR	C(UniMod:4)TC(UniMod:4)LQGWWGPEC(UniMod:4)SR	2	C(UniMod:4)TC(UniMod:4)LQGWWGPEC(UniMod:4)SR2	52724	47651.2	42939.5
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	CTCLQGWWGPECSR	C(UniMod:4)TC(UniMod:4)LQGWWGPEC(UniMod:4)SR	3	C(UniMod:4)TC(UniMod:4)LQGWWGPEC(UniMod:4)SR3	7744.29	11852.1	11863.5
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	CTCNLLGTDPQR	C(UniMod:4)TC(UniMod:4)NLLGTDPQR	2	C(UniMod:4)TC(UniMod:4)NLLGTDPQR2	2423.05	3900.41	4913.19
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	CTCPDQFPMIK	C(UniMod:4)TC(UniMod:4)PDQFPMIK	2	C(UniMod:4)TC(UniMod:4)PDQFPMIK2	51690	51323.7	48523
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	CTCPLGYTGK	C(UniMod:4)TC(UniMod:4)PLGYTGK	2	C(UniMod:4)TC(UniMod:4)PLGYTGK2	71625.3	86197	73237.3
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	CTCPQGYTGLNCQNLVR	C(UniMod:4)TC(UniMod:4)PQGYTGLNC(UniMod:4)QNLVR	3	C(UniMod:4)TC(UniMod:4)PQGYTGLNC(UniMod:4)QNLVR3	9170.84	7255.65	6908.54
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	CTCVGNGR	C(UniMod:4)TC(UniMod:4)VGNGR	1	C(UniMod:4)TC(UniMod:4)VGNGR1			11914.3
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	CTCVGNGR	C(UniMod:4)TC(UniMod:4)VGNGR	2	C(UniMod:4)TC(UniMod:4)VGNGR2			99475.7
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	CTDDFNGAQCK	C(UniMod:4)TDDFNGAQC(UniMod:4)K	2	C(UniMod:4)TDDFNGAQC(UniMod:4)K2	25112.6	34225.8	27345
P97535	P97535	PLA1A_RAT	Pla1a	Phospholipase A1 member A	1	CTDFQSANLLR	C(UniMod:4)TDFQSANLLR	2	C(UniMod:4)TDFQSANLLR2	134152	104002	121283
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	CTDILEK	C(UniMod:4)TDILEK	2	C(UniMod:4)TDILEK2	23986.5	16614	17986.7
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	CTDNGVVPQHQLSISPDIR	C(UniMod:4)TDNGVVPQHQLSISPDIR	3	C(UniMod:4)TDNGVVPQHQLSISPDIR3	8415.67	7681.79	6462.36
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	CTDQLLLLGQTDR	C(UniMod:4)TDQLLLLGQTDR	2	C(UniMod:4)TDQLLLLGQTDR2	27255.1	15460.1	21470.1
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	CTEEGKWSPELPVCAR	C(UniMod:4)TEEGKWSPELPVC(UniMod:4)AR	3	C(UniMod:4)TEEGKWSPELPVC(UniMod:4)AR3	7353.83	11157	5071.25
F7FMS0	F7FMS0	F7FMS0_RAT	Mst1	Macrophage stimulating 1	1	CTEEVVPEGCYHGSGEQYR	C(UniMod:4)TEEVVPEGC(UniMod:4)YHGSGEQYR	3	C(UniMod:4)TEEVVPEGC(UniMod:4)YHGSGEQYR3	16914.7	15371.8	18073.8
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	CTELNQAWTSLGK	C(UniMod:4)TELNQAWTSLGK	2	C(UniMod:4)TELNQAWTSLGK2	127021	124439	134167
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	CTELNQAWTSLGK	C(UniMod:4)TELNQAWTSLGK	3	C(UniMod:4)TELNQAWTSLGK3	6934.54		3819.75
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	CTEPQQLILK	C(UniMod:4)TEPQQLILK	2	C(UniMod:4)TEPQQLILK2	166335	133307	241035
A0A8I5ZY29	A0A8I5ZY29	A0A8I5ZY29_RAT	Usp14	Ubiquitin carboxyl-terminal hydrolase	1	CTESEEEEVTK	C(UniMod:4)TESEEEEVTK	2	C(UniMod:4)TESEEEEVTK2	7781.25	2767.85	4333.09
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	CTGCCHSPQHGAHEDSSMASGNAWK	C(UniMod:4)TGC(UniMod:4)C(UniMod:4)HSPQHGAHEDSSMASGNAWK	4	C(UniMod:4)TGC(UniMod:4)C(UniMod:4)HSPQHGAHEDSSMASGNAWK4	5172.32	8002.79	6702.22
P23358	P23358;D3ZJE2	RL12_RAT	Rpl12	Large ribosomal subunit protein uL11	0	CTGGEVGATSALAPK	C(UniMod:4)TGGEVGATSALAPK	2	C(UniMod:4)TGGEVGATSALAPK2	8936.02	4844.01	6629.31
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	CTGHSSYITHLDWSPDNK	C(UniMod:4)TGHSSYITHLDWSPDNK	3	C(UniMod:4)TGHSSYITHLDWSPDNK3	6759.86	2528.54	4881.46
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	CTGHSSYITHLDWSPDNK	C(UniMod:4)TGHSSYITHLDWSPDNK	4	C(UniMod:4)TGHSSYITHLDWSPDNK4	8647.23	12698.1	14606.7
Q4V7F2	Q4V7F2	CREL1_RAT	Creld1	Protein disulfide isomerase Creld1	1	CTGPEESHCLQCR	C(UniMod:4)TGPEESHC(UniMod:4)LQC(UniMod:4)R	3	C(UniMod:4)TGPEESHC(UniMod:4)LQC(UniMod:4)R3	45616.8	47303.5	44413.9
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	CTGPLPK	C(UniMod:4)TGPLPK	2	C(UniMod:4)TGPLPK2	36692.9	46337.9	33231
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	CTGSAINSR	C(UniMod:4)TGSAINSR	2	C(UniMod:4)TGSAINSR2			54290.9
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	CTGSALDEAPSGWHLWR	C(UniMod:4)TGSALDEAPSGWHLWR	3	C(UniMod:4)TGSALDEAPSGWHLWR3	3323.34	9120.26	9244.75
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	CTGYRPILQGFR	C(UniMod:4)TGYRPILQGFR	3	C(UniMod:4)TGYRPILQGFR3	70635.7	80208.3	80117.5
Q9JJ05	Q9JJ05	C1GLT_RAT	C1galt1	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1	1	CTHSSSIEDLALGR	C(UniMod:4)THSSSIEDLALGR	3	C(UniMod:4)THSSSIEDLALGR3	20172.3	25206.5	14072.6
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	CTHWAEGGQGALALAQAVQR	C(UniMod:4)THWAEGGQGALALAQAVQR	3	C(UniMod:4)THWAEGGQGALALAQAVQR3	27176.9	14477.3	33304.3
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	CTHYLKPLLEAGTQGTR	C(UniMod:4)THYLKPLLEAGTQGTR	3	C(UniMod:4)THYLKPLLEAGTQGTR3	2998.65		5783.94
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	CTHYLKPLLEAGTQGTR	C(UniMod:4)THYLKPLLEAGTQGTR	4	C(UniMod:4)THYLKPLLEAGTQGTR4	6462.47	3948.13	5783.21
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	CTIEAEPLEMIYDAR	C(UniMod:4)TIEAEPLEMIYDAR	2	C(UniMod:4)TIEAEPLEMIYDAR2	23939	32634.1	34029.8
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	CTIEAEPLEMIYDAR	C(UniMod:4)TIEAEPLEMIYDAR	3	C(UniMod:4)TIEAEPLEMIYDAR3	4669.81	4210.06	4721.16
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	CTIFIVDEDCPDSFSR	C(UniMod:4)TIFIVDEDC(UniMod:4)PDSFSR	3	C(UniMod:4)TIFIVDEDC(UniMod:4)PDSFSR3	10393.6	8187.22	21093.6
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	CTITGWIPAPR	C(UniMod:4)TITGWIPAPR	2	C(UniMod:4)TITGWIPAPR2	281468	303397	308601
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	CTITGWIPAPR	C(UniMod:4)TITGWIPAPR	3	C(UniMod:4)TITGWIPAPR3	7132.5	7639.89	
D3ZTJ0	D3ZTJ0	D3ZTJ0_RAT	Rp2	Protein XRP2	1	CTLACQQFR	C(UniMod:4)TLAC(UniMod:4)QQFR	2	C(UniMod:4)TLAC(UniMod:4)QQFR2	19876.7	19797.5	24610.3
D3ZT64	D3ZT64	D3ZT64_RAT	Atg2a	Autophagy related 2A	1	CTLDVIMPSAHIFLPSK	C(UniMod:4)TLDVIMPSAHIFLPSK	3	C(UniMod:4)TLDVIMPSAHIFLPSK3	6761.57	6010.44	2218.51
D3ZTX0	D3ZTX0	TMED7_RAT	Tmed7	Transmembrane emp24 domain-containing protein 7	1	CTLEFQVITGGHYDVDCR	C(UniMod:4)TLEFQVITGGHYDVDC(UniMod:4)R	3	C(UniMod:4)TLEFQVITGGHYDVDC(UniMod:4)R3	2554.08	7381.59	
P16975	P16975	SPRC_RAT	Sparc	SPARC	1	CTLEGTK	C(UniMod:4)TLEGTK	1	C(UniMod:4)TLEGTK1		2776.05	
P16975	P16975	SPRC_RAT	Sparc	SPARC	1	CTLEGTK	C(UniMod:4)TLEGTK	2	C(UniMod:4)TLEGTK2	227029	223244	204122
P16975	P16975	SPRC_RAT	Sparc	SPARC	1	CTLEGTKK	C(UniMod:4)TLEGTKK	2	C(UniMod:4)TLEGTKK2			4108.35
P02661	P02661	CASA1_RAT	Csn1s1	Alpha-S1-casein	1	CTLEQLQR	C(UniMod:4)TLEQLQR	2	C(UniMod:4)TLEQLQR2	9839.4	8941.36	9727.77
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	CTLHSTGAVFR	C(UniMod:4)TLHSTGAVFR	2	C(UniMod:4)TLHSTGAVFR2	6792.93	4908.08	2766.53
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	CTLHSTGAVFR	C(UniMod:4)TLHSTGAVFR	3	C(UniMod:4)TLHSTGAVFR3	86332.4	64242.2	77464
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	CTLLAAQANK	C(UniMod:4)TLLAAQANK	2	C(UniMod:4)TLLAAQANK2	59433.2	67568.8	51353.8
B2GV06	B2GV06	SCOT1_RAT	Oxct1	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial	1	CTLPLTGK	C(UniMod:4)TLPLTGK	2	C(UniMod:4)TLPLTGK2	135894	157705	151668
D3ZW15	D3ZW15	D3ZW15_RAT	Sec24b	SEC24 homolog B, COPII coat complex component	1	CTLTSIPQTQALLNK	C(UniMod:4)TLTSIPQTQALLNK	2	C(UniMod:4)TLTSIPQTQALLNK2		11090	2744.67
D3ZW15	D3ZW15	D3ZW15_RAT	Sec24b	SEC24 homolog B, COPII coat complex component	1	CTLTSIPQTQALLNK	C(UniMod:4)TLTSIPQTQALLNK	3	C(UniMod:4)TLTSIPQTQALLNK3		3211.33	2217
D3ZZA8	D3ZZA8	D3ZZA8_RAT	Sec24a	SEC24 homolog A, COPII coat complex component	1	CTLTSVPQTQALLNK	C(UniMod:4)TLTSVPQTQALLNK	2	C(UniMod:4)TLTSVPQTQALLNK2	7087.58	5827.63	3739.8
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	CTNFSSCWSDGK	C(UniMod:4)TNFSSC(UniMod:4)WSDGK	2	C(UniMod:4)TNFSSC(UniMod:4)WSDGK2	6693.09	10599.9	9889.51
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	CTNLAPGFR	C(UniMod:4)TNLAPGFR	2	C(UniMod:4)TNLAPGFR2	2.58287e+06	3.00586e+06	3.00149e+06
Q99ME0	Q99ME0	Q99ME0_RAT	Ppbp	Pro-platelet basic protein	1	CTNTLSGIPLNSISR	C(UniMod:4)TNTLSGIPLNSISR	2	C(UniMod:4)TNTLSGIPLNSISR2	3.57291e+06	3.37802e+06	3.37654e+06
Q99ME0	Q99ME0	Q99ME0_RAT	Ppbp	Pro-platelet basic protein	1	CTNTLSGIPLNSISR	C(UniMod:4)TNTLSGIPLNSISR	3	C(UniMod:4)TNTLSGIPLNSISR3	435105	425636	401640
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	CTPACDPGYQPTPGGGCQDVDECR	C(UniMod:4)TPAC(UniMod:4)DPGYQPTPGGGC(UniMod:4)QDVDEC(UniMod:4)R	3	C(UniMod:4)TPAC(UniMod:4)DPGYQPTPGGGC(UniMod:4)QDVDEC(UniMod:4)R3	5060.84	10885.4	5772.66
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	CTPACVSFGPK	C(UniMod:4)TPAC(UniMod:4)VSFGPK	2	C(UniMod:4)TPAC(UniMod:4)VSFGPK2	787446	816002	703124
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	CTPCPAGTYQGQAGSSACIPCPR	C(UniMod:4)TPC(UniMod:4)PAGTYQGQAGSSAC(UniMod:4)IPC(UniMod:4)PR	3	C(UniMod:4)TPC(UniMod:4)PAGTYQGQAGSSAC(UniMod:4)IPC(UniMod:4)PR3	9458.57	7409.67	5658.17
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	CTPPHVENAVIVSK	C(UniMod:4)TPPHVENAVIVSK	2	C(UniMod:4)TPPHVENAVIVSK2	50041	46531.8	37825.6
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	CTPPHVENAVIVSK	C(UniMod:4)TPPHVENAVIVSK	3	C(UniMod:4)TPPHVENAVIVSK3	457973	447965	485139
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	CTPSVISFGPK	C(UniMod:4)TPSVISFGPK	2	C(UniMod:4)TPSVISFGPK2	128430	124043	113845
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	CTQDLGNSTK	C(UniMod:4)TQDLGNSTK	2	C(UniMod:4)TQDLGNSTK2	338339		371149
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	CTQGFMASK	C(UniMod:4)TQGFMASK	2	C(UniMod:4)TQGFMASK2	152607	132059	124179
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	CTQGFMASKK	C(UniMod:4)TQGFMASKK	2	C(UniMod:4)TQGFMASKK2	83938.6	124156	116411
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	CTQGFMASKK	C(UniMod:4)TQGFMASKK	3	C(UniMod:4)TQGFMASKK3	746894	1.23276e+06	96389.8
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	CTQGFQLQDTPR	C(UniMod:4)TQGFQLQDTPR	2	C(UniMod:4)TQGFQLQDTPR2	4488.93	4021.44	1478.91
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	CTQVCSTPR	C(UniMod:4)TQVC(UniMod:4)STPR	2	C(UniMod:4)TQVC(UniMod:4)STPR2	14650.7	18031.1	21196.9
P81828	P81828	UP2_RAT		Urinary protein 2	1	CTSFDSTGFCHVGR	C(UniMod:4)TSFDSTGFC(UniMod:4)HVGR	2	C(UniMod:4)TSFDSTGFC(UniMod:4)HVGR2	20569.6	20763.8	29974.2
P81828	P81828	UP2_RAT		Urinary protein 2	1	CTSFDSTGFCHVGR	C(UniMod:4)TSFDSTGFC(UniMod:4)HVGR	3	C(UniMod:4)TSFDSTGFC(UniMod:4)HVGR3	369996	357638	395154
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	CTSFLVDELGVVDR	C(UniMod:4)TSFLVDELGVVDR	2	C(UniMod:4)TSFLVDELGVVDR2		8122.23	8155.36
Q498U1	Q498U1	Q498U1_RAT	Abcg3l4	ATP-binding cassette, subfamily G (WHITE), member 3-like 4	1	CTSGYVPHNDVVMHTVTVR	C(UniMod:4)TSGYVPHNDVVMHTVTVR	4	C(UniMod:4)TSGYVPHNDVVMHTVTVR4		889.045	1263.45
A0A8I6ACK9	A0A8I6ACK9	A0A8I6ACK9_RAT	Abcg3l3	ATP-binding cassette, subfamily G (WHITE), member 3-like 3	1	CTSGYVPQNDVIMHTVTVR	C(UniMod:4)TSGYVPQNDVIMHTVTVR	3	C(UniMod:4)TSGYVPQNDVIMHTVTVR3	6213.53	6508.79	
A0A8I6A0D0	A0A8I6A0D0	A0A8I6A0D0_RAT	Abcg3	ATP-binding cassette, subfamily G (WHITE), member 3	1	CTSGYVPQNDVVMHTVTVR	C(UniMod:4)TSGYVPQNDVVMHTVTVR	3	C(UniMod:4)TSGYVPQNDVVMHTVTVR3	13680.8	10601	10175.6
Q56AP7	Q56AP7	CRBN_RAT	Crbn	Protein cereblon	1	CTSLCCK	C(UniMod:4)TSLC(UniMod:4)C(UniMod:4)K	2	C(UniMod:4)TSLC(UniMod:4)C(UniMod:4)K2	6319.14	8347.05	
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	CTSNFLNPK	C(UniMod:4)TSNFLNPK	2	C(UniMod:4)TSNFLNPK2	86388.4	116100	127813
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	CTSTGWIPAPK	C(UniMod:4)TSTGWIPAPK	2	C(UniMod:4)TSTGWIPAPK2	776435	558264	580461
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	CTSTGWIPAPR	C(UniMod:4)TSTGWIPAPR	2	C(UniMod:4)TSTGWIPAPR2	876437	671161	613736
Q5FVP9	Q5FVP9	Q5FVP9_RAT	LOC100361907	Cfh protein	1	CTSTGWIPLPR	C(UniMod:4)TSTGWIPLPR	2	C(UniMod:4)TSTGWIPLPR2	73104	36088.4	33828.7
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	CTSVTLQPGANK	C(UniMod:4)TSVTLQPGANK	2	C(UniMod:4)TSVTLQPGANK2	7412.46	4016.7	4420.14
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	CTSWELATEEQAEK	C(UniMod:4)TSWELATEEQAEK	2	C(UniMod:4)TSWELATEEQAEK2	13644.9	14921.7	19956.7
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	CTSYNIPCTSDMAK	C(UniMod:4)TSYNIPC(UniMod:4)TSDMAK	2	C(UniMod:4)TSYNIPC(UniMod:4)TSDMAK2	12708	6376.15	
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	CTSYPDGSWK	C(UniMod:4)TSYPDGSWK	2	C(UniMod:4)TSYPDGSWK2	76309.8	73207.5	62380.9
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	CTSYPDGSWK	C(UniMod:4)TSYPDGSWK	3	C(UniMod:4)TSYPDGSWK3	5597.79	8514.26	
Q63632	Q63632	S12A4_RAT	Slc12a4	Solute carrier family 12 member 4	1	CTTAAHLALLVPK	C(UniMod:4)TTAAHLALLVPK	3	C(UniMod:4)TTAAHLALLVPK3	5292.67	5827.32	3038.6
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	CTTDHISAAGPWLK	C(UniMod:4)TTDHISAAGPWLK	2	C(UniMod:4)TTDHISAAGPWLK2	48353.8	53539.8	44015.9
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	CTTDHISAAGPWLK	C(UniMod:4)TTDHISAAGPWLK	3	C(UniMod:4)TTDHISAAGPWLK3	152556	107027	131470
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	CTTFLQQSPSGSSATTLR	C(UniMod:4)TTFLQQSPSGSSATTLR	2	C(UniMod:4)TTFLQQSPSGSSATTLR2	4337.54	4634.58	9827.95
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	CTTFLQQSPSGSSATTLR	C(UniMod:4)TTFLQQSPSGSSATTLR	3	C(UniMod:4)TTFLQQSPSGSSATTLR3	6331.02	4568.81	
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	CTTPPPPPGPTYQCLK	C(UniMod:4)TTPPPPPGPTYQC(UniMod:4)LK	2	C(UniMod:4)TTPPPPPGPTYQC(UniMod:4)LK2	1.53748e+06	1.16637e+06	1.14947e+06
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	CTTPPPPPGPTYQCLK	C(UniMod:4)TTPPPPPGPTYQC(UniMod:4)LK	3	C(UniMod:4)TTPPPPPGPTYQC(UniMod:4)LK3	370552	287618	373569
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	CTTSILHNLSHHR	C(UniMod:4)TTSILHNLSHHR	3	C(UniMod:4)TTSILHNLSHHR3	3562.92		
A0A8I5Y120	A0A8I5Y120	A0A8I5Y120_RAT	Brap	BRCA1 associated protein	1	CTVCLER	C(UniMod:4)TVC(UniMod:4)LER	2	C(UniMod:4)TVC(UniMod:4)LER2	5860.5	3066.66	2693
Q4V888	Q4V888	PP4P2_RAT	Pip4p2	Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase	1	CTVCNEATPIK	C(UniMod:4)TVC(UniMod:4)NEATPIK	2	C(UniMod:4)TVC(UniMod:4)NEATPIK2	15432.7	7600.49	7402.03
Q5XI81	Q5XI81	FXR1_RAT	Fxr1	RNA-binding protein FXR1	1	CTVDVPEDLR	C(UniMod:4)TVDVPEDLR	2	C(UniMod:4)TVDVPEDLR2	8844.09	11606	8456.25
Q5PPL3	Q5PPL3	NSDHL_RAT	Nsdhl	Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating	1	CTVIGGSGFLGQHMVEQLLSR	C(UniMod:4)TVIGGSGFLGQHMVEQLLSR	3	C(UniMod:4)TVIGGSGFLGQHMVEQLLSR3	43381.9	49063.4	51644
G3V9R2	Q5FVP9;G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	0	CTVNGWEPEVPCLR	C(UniMod:4)TVNGWEPEVPC(UniMod:4)LR	2	C(UniMod:4)TVNGWEPEVPC(UniMod:4)LR2	321384	283016	251247
G3V9R2	Q5FVP9;G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	0	CTVNGWEPEVPCLR	C(UniMod:4)TVNGWEPEVPC(UniMod:4)LR	3	C(UniMod:4)TVNGWEPEVPC(UniMod:4)LR3	108657	102810	76647.3
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	CTVQTEIQEIITSILLSGR	C(UniMod:4)TVQTEIQEIITSILLSGR	3	C(UniMod:4)TVQTEIQEIITSILLSGR3	5131.45		
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	CTVSFLLSEDGSGK	C(UniMod:4)TVSFLLSEDGSGK	2	C(UniMod:4)TVSFLLSEDGSGK2	61481.9	64414.7	50216
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	CTVSLAR	C(UniMod:4)TVSLAR	2	C(UniMod:4)TVSLAR2	46942.3	44307.1	53752.9
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	CTVVASVLGSGR	C(UniMod:4)TVVASVLGSGR	2	C(UniMod:4)TVVASVLGSGR2	269652	294541	288117
A0A8I5Y7I2	A0A8I5Y7I2	A0A8I5Y7I2_RAT	Kctd12	Potassium channel tetramerization domain containing 12	1	CTVVSVPDSLLWR	C(UniMod:4)TVVSVPDSLLWR	2	C(UniMod:4)TVVSVPDSLLWR2	174912	164408	178479
A0A8I5Y7I2	A0A8I5Y7I2	A0A8I5Y7I2_RAT	Kctd12	Potassium channel tetramerization domain containing 12	1	CTVVSVPDSLLWR	C(UniMod:4)TVVSVPDSLLWR	3	C(UniMod:4)TVVSVPDSLLWR3	19567.1	15310	
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CTVYFEGTR	C(UniMod:4)TVYFEGTR	2	C(UniMod:4)TVYFEGTR2	45536.6	50414.7	48571.2
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	CTWLIEGQPNK	C(UniMod:4)TWLIEGQPNK	2	C(UniMod:4)TWLIEGQPNK2	63591.5	70147.6	74426.1
A0A8I6ASZ5	A0A8I6ASZ5	A0A8I6ASZ5_RAT	Tcf25	Transcription factor 25	1	CTWLTTPK	C(UniMod:4)TWLTTPK	2	C(UniMod:4)TWLTTPK2	5011.5	7475.29	5300.33
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	CTYHDLPMK	C(UniMod:4)TYHDLPMK	2	C(UniMod:4)TYHDLPMK2	50859.7	50230.5	35181.7
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	CTYHDLPMK	C(UniMod:4)TYHDLPMK	3	C(UniMod:4)TYHDLPMK3	329181	364067	367770
A0A8I5XWV4	A0A8I5XWV4	A0A8I5XWV4_RAT	Tm6sf1	Transmembrane 6 superfamily member 1	1	CTYSPEFFIR	C(UniMod:4)TYSPEFFIR	2	C(UniMod:4)TYSPEFFIR2	25220.4	23285.6	19314.7
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	CVAALSAACPQEAAGTASR	C(UniMod:4)VAALSAAC(UniMod:4)PQEAAGTASR	2	C(UniMod:4)VAALSAAC(UniMod:4)PQEAAGTASR2	2139.07	2529.96	
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	CVAALTR	C(UniMod:4)VAALTR	2	C(UniMod:4)VAALTR2	204624	143065	176553
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	CVAEALLCNGQDDCGDGSDER	C(UniMod:4)VAEALLC(UniMod:4)NGQDDC(UniMod:4)GDGSDER	3	C(UniMod:4)VAEALLC(UniMod:4)NGQDDC(UniMod:4)GDGSDER3	6573.3	10791.4	9543.1
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	CVAEIIAGLIR	C(UniMod:4)VAEIIAGLIR	2	C(UniMod:4)VAEIIAGLIR2	22474	13684.5	13005.4
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	CVAESTAVCR	C(UniMod:4)VAESTAVC(UniMod:4)R	2	C(UniMod:4)VAESTAVC(UniMod:4)R2	1.31033e+06	1.45927e+06	1.31303e+06
A0A8I5ZU57	A0A8I5ZU57	A0A8I5ZU57_RAT	Ccny	Cyclin Y	1	CVALAIYYHIK	C(UniMod:4)VALAIYYHIK	3	C(UniMod:4)VALAIYYHIK3	7502.29	2266.7	6254.67
Q9JJM7	Q9JJM7	GP1BB_RAT	Gp1bb	Platelet glycoprotein Ib beta chain	1	CVAPLALR	C(UniMod:4)VAPLALR	1	C(UniMod:4)VAPLALR1	5631.27	1291.19	
Q9JJM7	Q9JJM7	GP1BB_RAT	Gp1bb	Platelet glycoprotein Ib beta chain	1	CVAPLALR	C(UniMod:4)VAPLALR	2	C(UniMod:4)VAPLALR2	5.76543e+06	6.25028e+06	6.82514e+06
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	CVAQASK	C(UniMod:4)VAQASK	1	C(UniMod:4)VAQASK1			5170.84
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	CVATNVVGSAALQYGLR	C(UniMod:4)VATNVVGSAALQYGLR	2	C(UniMod:4)VATNVVGSAALQYGLR2	5748.38	4379.71	2962.92
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	CVAVGPGGYTVVVCIGQIVLLK	C(UniMod:4)VAVGPGGYTVVVC(UniMod:4)IGQIVLLK	3	C(UniMod:4)VAVGPGGYTVVVC(UniMod:4)IGQIVLLK3	3591.88		
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	CVAYTGNNMR	C(UniMod:4)VAYTGNNMR	2	C(UniMod:4)VAYTGNNMR2	31167.6	32630.5	26316.4
Q4V7F2	Q4V7F2	CREL1_RAT	Creld1	Protein disulfide isomerase Creld1	1	CVCAEGFR	C(UniMod:4)VC(UniMod:4)AEGFR	2	C(UniMod:4)VC(UniMod:4)AEGFR2	39013.5	31360.7	42811.9
P21674	P21674	FST_RAT	Fst	Follistatin	1	CVCAPDCSNITWK	C(UniMod:4)VC(UniMod:4)APDC(UniMod:4)SNITWK	2	C(UniMod:4)VC(UniMod:4)APDC(UniMod:4)SNITWK2	3595.61	2496.15	6218.98
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	CVCAPGWGGPR	C(UniMod:4)VC(UniMod:4)APGWGGPR	2	C(UniMod:4)VC(UniMod:4)APGWGGPR2	83684.8	111698	99471.8
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	CVCDPAGCLR	C(UniMod:4)VC(UniMod:4)DPAGC(UniMod:4)LR	2	C(UniMod:4)VC(UniMod:4)DPAGC(UniMod:4)LR2	71265.1	87413.9	50189.9
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	CVCDPGYSGEDCGVR	C(UniMod:4)VC(UniMod:4)DPGYSGEDC(UniMod:4)GVR	2	C(UniMod:4)VC(UniMod:4)DPGYSGEDC(UniMod:4)GVR2	5769.54	17098.6	16368.2
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	CVCDPGYSGEDCSVR	C(UniMod:4)VC(UniMod:4)DPGYSGEDC(UniMod:4)SVR	2	C(UniMod:4)VC(UniMod:4)DPGYSGEDC(UniMod:4)SVR2	12493.2	18514.6	8348
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	CVCEIER	C(UniMod:4)VC(UniMod:4)EIER	1	C(UniMod:4)VC(UniMod:4)EIER1	546.463	1711.3	
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	CVCEIER	C(UniMod:4)VC(UniMod:4)EIER	2	C(UniMod:4)VC(UniMod:4)EIER2	426970	511153	465399
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	CVCFPGYSGPSCGWPSCPGDCQGR	C(UniMod:4)VC(UniMod:4)FPGYSGPSC(UniMod:4)GWPSC(UniMod:4)PGDC(UniMod:4)QGR	3	C(UniMod:4)VC(UniMod:4)FPGYSGPSC(UniMod:4)GWPSC(UniMod:4)PGDC(UniMod:4)QGR3	9300.34	6363.87	9766.19
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	CVCGTGFR	C(UniMod:4)VC(UniMod:4)GTGFR	2	C(UniMod:4)VC(UniMod:4)GTGFR2	181074	260885	232106
O88281	O88281	MEGF6_RAT	Megf6	Multiple epidermal growth factor-like domains protein 6	1	CVCHAGYELGADGR	C(UniMod:4)VC(UniMod:4)HAGYELGADGR	3	C(UniMod:4)VC(UniMod:4)HAGYELGADGR3	1312.6	4336.75	3994.66
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	CVCHDGFEGNGFSCK	C(UniMod:4)VC(UniMod:4)HDGFEGNGFSC(UniMod:4)K	3	C(UniMod:4)VC(UniMod:4)HDGFEGNGFSC(UniMod:4)K3	1424.67	1960.35	1920.31
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	CVCKDNVEGFSCER	C(UniMod:4)VC(UniMod:4)KDNVEGFSC(UniMod:4)ER	3	C(UniMod:4)VC(UniMod:4)KDNVEGFSC(UniMod:4)ER3	7116.46	8165.29	5242.78
P97885	P97885	CXCL5_RAT	Cxcl5	C-X-C motif chemokine 5	1	CVCLTLAPR	C(UniMod:4)VC(UniMod:4)LTLAPR	2	C(UniMod:4)VC(UniMod:4)LTLAPR2	11505.4	12581.3	12607
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	CVCNPGFTGEDCGSR	C(UniMod:4)VC(UniMod:4)NPGFTGEDC(UniMod:4)GSR	2	C(UniMod:4)VC(UniMod:4)NPGFTGEDC(UniMod:4)GSR2	7715.34	9011.58	10134.7
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	CVCNPGFTGEDCGSRR	C(UniMod:4)VC(UniMod:4)NPGFTGEDC(UniMod:4)GSRR	3	C(UniMod:4)VC(UniMod:4)NPGFTGEDC(UniMod:4)GSRR3		5290.9	
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	CVCNPGYSGEDCGVR	C(UniMod:4)VC(UniMod:4)NPGYSGEDC(UniMod:4)GVR	2	C(UniMod:4)VC(UniMod:4)NPGYSGEDC(UniMod:4)GVR2	15462.2	16794	13429.1
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	CVCNPGYSGEDCGVR	C(UniMod:4)VC(UniMod:4)NPGYSGEDC(UniMod:4)GVR	3	C(UniMod:4)VC(UniMod:4)NPGYSGEDC(UniMod:4)GVR3	1339.56		2737.94
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	CVCNPGYTGPACATR	C(UniMod:4)VC(UniMod:4)NPGYTGPAC(UniMod:4)ATR	2	C(UniMod:4)VC(UniMod:4)NPGYTGPAC(UniMod:4)ATR2	8035.57	4837.29	5599.22
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	CVCNPGYTGPACATR	C(UniMod:4)VC(UniMod:4)NPGYTGPAC(UniMod:4)ATR	3	C(UniMod:4)VC(UniMod:4)NPGYTGPAC(UniMod:4)ATR3	1412.79	2610.8	3856.62
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	CVCNYLGTVR	C(UniMod:4)VC(UniMod:4)NYLGTVR	2	C(UniMod:4)VC(UniMod:4)NYLGTVR2	78538.5	102700	99521.8
O35370	O35370	O35370_RAT	Thbd	Thrombomodulin	1	CVCPSGGDLQADGR	C(UniMod:4)VC(UniMod:4)PSGGDLQADGR	2	C(UniMod:4)VC(UniMod:4)PSGGDLQADGR2	276463	289157	307984
O35370	O35370	O35370_RAT	Thbd	Thrombomodulin	1	CVCPSGGDLQADGR	C(UniMod:4)VC(UniMod:4)PSGGDLQADGR	3	C(UniMod:4)VC(UniMod:4)PSGGDLQADGR3	8023.17	8449.64	6329.93
O35568	O35568	FBLN3_RAT	Efemp1	EGF-containing fibulin-like extracellular matrix protein 1	1	CVCPVSNTMCR	C(UniMod:4)VC(UniMod:4)PVSNTMC(UniMod:4)R	2	C(UniMod:4)VC(UniMod:4)PVSNTMC(UniMod:4)R2	35630.5	34554.5	27368.9
Q62632	Q62632	FSTL1_RAT	Fstl1	Follistatin-related protein 1	1	CVCSCGHWVCTAMTCDGK	C(UniMod:4)VC(UniMod:4)SC(UniMod:4)GHWVC(UniMod:4)TAMTC(UniMod:4)DGK	3	C(UniMod:4)VC(UniMod:4)SC(UniMod:4)GHWVC(UniMod:4)TAMTC(UniMod:4)DGK3	17572.6	9541.2	6934.89
Q5M7T1	Q5M7T1	CIAO1_RAT	Ciao1	Probable cytosolic iron-sulfur protein assembly protein CIAO1	1	CVCTLSGFHTR	C(UniMod:4)VC(UniMod:4)TLSGFHTR	2	C(UniMod:4)VC(UniMod:4)TLSGFHTR2	12721.7	8300.29	9340.14
Q5M7T1	Q5M7T1	CIAO1_RAT	Ciao1	Probable cytosolic iron-sulfur protein assembly protein CIAO1	1	CVCTLSGFHTR	C(UniMod:4)VC(UniMod:4)TLSGFHTR	3	C(UniMod:4)VC(UniMod:4)TLSGFHTR3	25467.2	26061.4	28128.3
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	CVCWPGYSGEDCSTR	C(UniMod:4)VC(UniMod:4)WPGYSGEDC(UniMod:4)STR	2	C(UniMod:4)VC(UniMod:4)WPGYSGEDC(UniMod:4)STR2	13647.6	16401.3	13332.5
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	CVCWPGYTGADCSTR	C(UniMod:4)VC(UniMod:4)WPGYTGADC(UniMod:4)STR	2	C(UniMod:4)VC(UniMod:4)WPGYTGADC(UniMod:4)STR2	18157.5	24910.9	17917.3
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	CVCWPGYTGR	C(UniMod:4)VC(UniMod:4)WPGYTGR	2	C(UniMod:4)VC(UniMod:4)WPGYTGR2	18562	15300.3	14845.7
B0BN94	B0BN94	F136A_RAT	Fam136a	Protein FAM136A	1	CVDDHMHLIPTMTK	C(UniMod:4)VDDHMHLIPTMTK	4	C(UniMod:4)VDDHMHLIPTMTK4	11096.9	7776.43	16107.9
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	CVDINECVTDLHTCTR	C(UniMod:4)VDINEC(UniMod:4)VTDLHTC(UniMod:4)TR	3	C(UniMod:4)VDINEC(UniMod:4)VTDLHTC(UniMod:4)TR3	69314.5	68746.6	57961.5
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	CVDKINEFLCQCPK	C(UniMod:4)VDKINEFLC(UniMod:4)QC(UniMod:4)PK	3	C(UniMod:4)VDKINEFLC(UniMod:4)QC(UniMod:4)PK3	2385.52	2441.84	
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	CVDLFAPGK	C(UniMod:4)VDLFAPGK	2	C(UniMod:4)VDLFAPGK2	326409	261921	216730
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	CVDLVIQELISTVR	C(UniMod:4)VDLVIQELISTVR	2	C(UniMod:4)VDLVIQELISTVR2	9152.44	5696.25	10569.1
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	CVDLVIQELISTVR	C(UniMod:4)VDLVIQELISTVR	3	C(UniMod:4)VDLVIQELISTVR3	7099.04	6671.53	6455.66
Q5XIL0	Q5XIL0	RN167_RAT	Rnf167	E3 ubiquitin-protein ligase RNF167	1	CVDPWLTQTR	C(UniMod:4)VDPWLTQTR	2	C(UniMod:4)VDPWLTQTR2	5532.48	4464.07	4207.83
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	CVDQPDGYECR	C(UniMod:4)VDQPDGYEC(UniMod:4)R	2	C(UniMod:4)VDQPDGYEC(UniMod:4)R2	8432.99	6272.61	10854.7
D3ZUP8	D3ZUP8	D3ZUP8_RAT	Lmbrd2	LMBR1 domain containing 2	1	CVDTILK	C(UniMod:4)VDTILK	2	C(UniMod:4)VDTILK2	8626.94	7401.76	
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	CVDVDECSPPAEPCGK	C(UniMod:4)VDVDEC(UniMod:4)SPPAEPC(UniMod:4)GK	2	C(UniMod:4)VDVDEC(UniMod:4)SPPAEPC(UniMod:4)GK2	645991	419877	340329
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	CVDVDECSPPAEPCGK	C(UniMod:4)VDVDEC(UniMod:4)SPPAEPC(UniMod:4)GK	3	C(UniMod:4)VDVDEC(UniMod:4)SPPAEPC(UniMod:4)GK3	512628	364138	269592
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CVDVRPGYCYTTLTNGR	C(UniMod:4)VDVRPGYC(UniMod:4)YTTLTNGR	3	C(UniMod:4)VDVRPGYC(UniMod:4)YTTLTNGR3	5789.26	13906.9	3974.79
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	CVDWSIAVYTR	C(UniMod:4)VDWSIAVYTR	2	C(UniMod:4)VDWSIAVYTR2	8582.97	3623.5	
P08650	P08650	CO5_RAT	C5	Complement C5	1	CVEADCGQLQAELDLAISADTRK	C(UniMod:4)VEADC(UniMod:4)GQLQAELDLAISADTRK	3	C(UniMod:4)VEADC(UniMod:4)GQLQAELDLAISADTRK3	13298.2	19158.2	4852.45
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	CVEDVLK	C(UniMod:4)VEDVLK	1	C(UniMod:4)VEDVLK1	3280.49	3247.21	8749.02
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	CVEDVLK	C(UniMod:4)VEDVLK	2	C(UniMod:4)VEDVLK2	166485	163704	168327
P51111	P51111	HD_RAT	Htt	Huntingtin	1	CVEEVLGYLK	C(UniMod:4)VEEVLGYLK	2	C(UniMod:4)VEEVLGYLK2	2593.63	3437.14	
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	CVEFADPELEAWGNLNK	C(UniMod:4)VEFADPELEAWGNLNK	3	C(UniMod:4)VEFADPELEAWGNLNK3	4689.15		1729.03
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	CVEILSR	C(UniMod:4)VEILSR	2	C(UniMod:4)VEILSR2	55419.4	54931.1	49091.6
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	CVELDCWDGK	C(UniMod:4)VELDC(UniMod:4)WDGK	2	C(UniMod:4)VELDC(UniMod:4)WDGK2	2453.7	7848.94	8754.63
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	CVELDVWK	C(UniMod:4)VELDVWK	2	C(UniMod:4)VELDVWK2	18466.9	23645.6	23270.9
A0A8I5ZQE9	A0A8I5ZQE9	A0A8I5ZQE9_RAT	Irf9	Interferon regulatory factor 9	1	CVELFSTTYFCR	C(UniMod:4)VELFSTTYFC(UniMod:4)R	2	C(UniMod:4)VELFSTTYFC(UniMod:4)R2	4610.67	5436.54	2497.12
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	CVELGAYGQAVR	C(UniMod:4)VELGAYGQAVR	2	C(UniMod:4)VELGAYGQAVR2	10756.9	19675.1	10352.3
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	CVELVHEEMQR	C(UniMod:4)VELVHEEMQR	2	C(UniMod:4)VELVHEEMQR2	9532.84	10986.2	9052.48
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	CVELVHEEMQR	C(UniMod:4)VELVHEEMQR	3	C(UniMod:4)VELVHEEMQR3	61176.3	53102.1	64944.6
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	CVENECVCDEGFTGEDCSELICPNDCFDR	C(UniMod:4)VENEC(UniMod:4)VC(UniMod:4)DEGFTGEDC(UniMod:4)SELIC(UniMod:4)PNDC(UniMod:4)FDR	4	C(UniMod:4)VENEC(UniMod:4)VC(UniMod:4)DEGFTGEDC(UniMod:4)SELIC(UniMod:4)PNDC(UniMod:4)FDR4	2728.54	3115.89	5825.95
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	CVEPYVQVSDNR	C(UniMod:4)VEPYVQVSDNR	2	C(UniMod:4)VEPYVQVSDNR2	442518	448167	429933
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	CVEPYVQVSDNR	C(UniMod:4)VEPYVQVSDNR	3	C(UniMod:4)VEPYVQVSDNR3	32734.8	45833.2	49171.7
P04904	P04904	GSTA3_RAT	Gsta3	Glutathione S-transferase alpha-3	1	CVESAVK	C(UniMod:4)VESAVK	2	C(UniMod:4)VESAVK2	26380.8	21619.9	35758.2
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	CVESLSFIVR	C(UniMod:4)VESLSFIVR	2	C(UniMod:4)VESLSFIVR2	2495.05	2509.08	2918.29
A0A8I6APP3	A0A8I6APP3	A0A8I6APP3_RAT	Plekho2	Pleckstrin homology domain containing O2	1	CVETVELGSYEK	C(UniMod:4)VETVELGSYEK	2	C(UniMod:4)VETVELGSYEK2	115525	116072	123813
Q9Z269	Q9Z269	VAPB_RAT	Vapb	Vesicle-associated membrane protein-associated protein B	1	CVFELPAENAKPHDVEINK	C(UniMod:4)VFELPAENAKPHDVEINK	3	C(UniMod:4)VFELPAENAKPHDVEINK3	36906.9	52017.4	37797.1
Q9Z269	Q9Z269	VAPB_RAT	Vapb	Vesicle-associated membrane protein-associated protein B	1	CVFELPAENAKPHDVEINK	C(UniMod:4)VFELPAENAKPHDVEINK	4	C(UniMod:4)VFELPAENAKPHDVEINK4	157066	135181	166941
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	CVFEMPNENDK	C(UniMod:4)VFEMPNENDK	2	C(UniMod:4)VFEMPNENDK2	189005	176827	202149
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	CVFPVSPK	C(UniMod:4)VFPVSPK	2	C(UniMod:4)VFPVSPK2	39606.9	35315.9	29656.5
Q63060	Q63060;A0A8I6AQ25	GLPK_RAT	Gk	Glycerol kinase	0	CVFSEHGLLTTVAYK	C(UniMod:4)VFSEHGLLTTVAYK	3	C(UniMod:4)VFSEHGLLTTVAYK3	25559.4	28467.7	38908.1
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	CVFTGEGR	C(UniMod:4)VFTGEGR	2	C(UniMod:4)VFTGEGR2	42279.5	54007.3	
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	CVFYPDIQSCEHSLR	C(UniMod:4)VFYPDIQSC(UniMod:4)EHSLR	3	C(UniMod:4)VFYPDIQSC(UniMod:4)EHSLR3	14740.2	11884.7	19229.5
Q4KM45	Q4KM45	ADSSP_RAT	Adissp	Adipose-secreted signaling protein	1	CVGAELEYDSEHSDWHGFD	C(UniMod:4)VGAELEYDSEHSDWHGFD	3	C(UniMod:4)VGAELEYDSEHSDWHGFD3	8630.13	11600.7	22722
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	CVGGQWSEPPK	C(UniMod:4)VGGQWSEPPK	2	C(UniMod:4)VGGQWSEPPK2	219459	180369	190242
Q6AYN2	Q6AYN2	SARAF_RAT	Saraf	Store-operated calcium entry-associated regulatory factor	1	CVGGTAGCDAYTPK	C(UniMod:4)VGGTAGC(UniMod:4)DAYTPK	2	C(UniMod:4)VGGTAGC(UniMod:4)DAYTPK2	3146.7	976.299	1639.68
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	CVGNYDNR	C(UniMod:4)VGNYDNR	2	C(UniMod:4)VGNYDNR2	916573	1.0716e+06	1.1636e+06
A0A8I6A1Z5	A0A8I6A1Z5	A0A8I6A1Z5_RAT	Tmx1	Thioredoxin-related transmembrane protein 1	1	CVGPSSATDK	C(UniMod:4)VGPSSATDK	2	C(UniMod:4)VGPSSATDK2	15776.4	16239.4	16492.4
A0A8I6A1Z5	A0A8I6A1Z5	A0A8I6A1Z5_RAT	Tmx1	Thioredoxin-related transmembrane protein 1	1	CVGPSSATDKS	C(UniMod:4)VGPSSATDKS	2	C(UniMod:4)VGPSSATDKS2	267814	244723	236319
D4A7V9	D4A7V9	E2AK4_RAT	Eif2ak4	eIF-2-alpha kinase GCN2	1	CVGSDEQLGK	C(UniMod:4)VGSDEQLGK	2	C(UniMod:4)VGSDEQLGK2	6360.38	6159.62	
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	CVGSQWK	C(UniMod:4)VGSQWK	1	C(UniMod:4)VGSQWK1	2689.85	3190.73	6687.3
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	CVGSQWK	C(UniMod:4)VGSQWK	2	C(UniMod:4)VGSQWK2	762683	814315	899563
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	CVGSQWKEETR	C(UniMod:4)VGSQWKEETR	3	C(UniMod:4)VGSQWKEETR3	92440.7	96854.5	171050
Q9EQV9	Q9EQV9	CBPB2_RAT	Cpb2	Carboxypeptidase B2	1	CVGTDLNR	C(UniMod:4)VGTDLNR	2	C(UniMod:4)VGTDLNR2	119951	146805	146382
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	CVGVGESDGSIWNPDGIDPK	C(UniMod:4)VGVGESDGSIWNPDGIDPK	3	C(UniMod:4)VGVGESDGSIWNPDGIDPK3	18386.4	23314.4	37067
Q9ES54	Q9ES54	NPL4_RAT	Nploc4	Nuclear protein localization protein 4 homolog	1	CVHCVPLEPFDEDYLNHLEPPVK	C(UniMod:4)VHC(UniMod:4)VPLEPFDEDYLNHLEPPVK	4	C(UniMod:4)VHC(UniMod:4)VPLEPFDEDYLNHLEPPVK4	18770.4	10621	9074.29
P49445	P49445	PTN7_RAT	Ptpn7	Tyrosine-protein phosphatase non-receptor type 7	1	CVHYWPTEEEAYGPFQIR	C(UniMod:4)VHYWPTEEEAYGPFQIR	3	C(UniMod:4)VHYWPTEEEAYGPFQIR3		6004.09	3486.26
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	CVIAVIR	C(UniMod:4)VIAVIR	2	C(UniMod:4)VIAVIR2	22960.4	25107.4	28480.4
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	CVIDICMK	C(UniMod:4)VIDIC(UniMod:4)MK	2	C(UniMod:4)VIDIC(UniMod:4)MK2	21747.1	11039.8	8264.3
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	CVIHIHTLATAAVSSMK	C(UniMod:4)VIHIHTLATAAVSSMK	3	C(UniMod:4)VIHIHTLATAAVSSMK3	20177.3	18623	25316.1
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	CVIHIHTLATAAVSSMK	C(UniMod:4)VIHIHTLATAAVSSMK	4	C(UniMod:4)VIHIHTLATAAVSSMK4	18850.1	14049.5	13242.3
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	CVINATGPFTDSVR	C(UniMod:4)VINATGPFTDSVR	2	C(UniMod:4)VINATGPFTDSVR2	153403	129795	160480
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	CVIVEQK	C(UniMod:4)VIVEQK	1	C(UniMod:4)VIVEQK1	1506.59		799.157
D4ABU7	D4ABU7	D4ABU7_RAT	Trem1	Triggering receptor expressed on myeloid cells 1	1	CVIYHPPNDPVLLFHPVR	C(UniMod:4)VIYHPPNDPVLLFHPVR	4	C(UniMod:4)VIYHPPNDPVLLFHPVR4	2120.51	2264.87	5933.41
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	CVLDTMR	C(UniMod:4)VLDTMR	2	C(UniMod:4)VLDTMR2	42286.5	20044.3	33796.5
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	CVLEVISDSLSK	C(UniMod:4)VLEVISDSLSK	2	C(UniMod:4)VLEVISDSLSK2	193684	227223	203538
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	CVLEVISDSLSK	C(UniMod:4)VLEVISDSLSK	3	C(UniMod:4)VLEVISDSLSK3		3223.42	
P06214	P06214	HEM2_RAT	Alad	Delta-aminolevulinic acid dehydratase	1	CVLIFGVPSR	C(UniMod:4)VLIFGVPSR	2	C(UniMod:4)VLIFGVPSR2	15595.8	17260.4	11389.8
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	CVLLSAEILK	C(UniMod:4)VLLSAEILK	2	C(UniMod:4)VLLSAEILK2	39256.7	30883.3	39469.5
Q5M7T4	Q5M7T4	YIPF4_RAT	Yipf4	Protein YIPF4	1	CVLMPMPSLGFNR	C(UniMod:4)VLMPMPSLGFNR	2	C(UniMod:4)VLMPMPSLGFNR2	87799.4	87503.5	99041.7
P63036	P63036	DNJA1_RAT	Dnaja1	DnaJ homolog subfamily A member 1	1	CVLNEGMPIYR	C(UniMod:4)VLNEGMPIYR	2	C(UniMod:4)VLNEGMPIYR2	63354.6	44783.5	61288.6
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	CVLNFKPCGLFGK	C(UniMod:4)VLNFKPC(UniMod:4)GLFGK	3	C(UniMod:4)VLNFKPC(UniMod:4)GLFGK3	47019.5	50664.4	49824.2
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	CVLNWFGDWSTEALYQVGK	C(UniMod:4)VLNWFGDWSTEALYQVGK	3	C(UniMod:4)VLNWFGDWSTEALYQVGK3	1579.95	2163.77	3254.45
Q5XIG8	Q5XIG8	STRAP_RAT	Strap	Serine-threonine kinase receptor-associated protein	1	CVLPEEDSGELAKPK	C(UniMod:4)VLPEEDSGELAKPK	3	C(UniMod:4)VLPEEDSGELAKPK3	83453.5	72316.2	69999.1
A0A8I5ZN24	A0A8I5ZN24	A0A8I5ZN24_RAT	Dhrs7	Dehydrogenase/reductase 7	1	CVLPHMVER	C(UniMod:4)VLPHMVER	2	C(UniMod:4)VLPHMVER2	6646.51	10712.5	3467.48
A0A8I5ZN24	A0A8I5ZN24	A0A8I5ZN24_RAT	Dhrs7	Dehydrogenase/reductase 7	1	CVLPHMVER	C(UniMod:4)VLPHMVER	3	C(UniMod:4)VLPHMVER3	58463.3	79564.6	74794.6
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	CVLPPMDGYPHCEGK	C(UniMod:4)VLPPMDGYPHC(UniMod:4)EGK	3	C(UniMod:4)VLPPMDGYPHC(UniMod:4)EGK3	33570.8	31189.2	34424.5
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	CVLPQLELHPGLEDK	C(UniMod:4)VLPQLELHPGLEDK	3	C(UniMod:4)VLPQLELHPGLEDK3	28386.6	22720.2	18657
O88994	O88994	MARC2_RAT	Mtarc2	Mitochondrial amidoxime reducing component 2	1	CVLTTVDPDTGIIDR	C(UniMod:4)VLTTVDPDTGIIDR	2	C(UniMod:4)VLTTVDPDTGIIDR2	17646.7	18876.2	19243.6
O88994	O88994	MARC2_RAT	Mtarc2	Mitochondrial amidoxime reducing component 2	1	CVLTTVDPDTGIIDRK	C(UniMod:4)VLTTVDPDTGIIDRK	3	C(UniMod:4)VLTTVDPDTGIIDRK3	27048.4	20883.7	30850.4
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	CVMDDDNEVR	C(UniMod:4)VMDDDNEVR	2	C(UniMod:4)VMDDDNEVR2	15649.8	10844.3	11351.9
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	CVMDDDNEVRDR	C(UniMod:4)VMDDDNEVRDR	3	C(UniMod:4)VMDDDNEVRDR3	92891.9	103194	103720
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	CVMNCPSWK	C(UniMod:4)VMNC(UniMod:4)PSWK	2	C(UniMod:4)VMNC(UniMod:4)PSWK2	86750.6	104057	117577
D3ZSZ6	F1LZW2;F1M5T2;D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	0	CVMNNYFGIGLDAK	C(UniMod:4)VMNNYFGIGLDAK	2	C(UniMod:4)VMNNYFGIGLDAK2	44535.4	42817.1	37368.7
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	CVNAALEGYYVVAVVK	C(UniMod:4)VNAALEGYYVVAVVK	2	C(UniMod:4)VNAALEGYYVVAVVK2	13828.2	16862.8	11401.2
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	CVNAALEGYYVVAVVK	C(UniMod:4)VNAALEGYYVVAVVK	3	C(UniMod:4)VNAALEGYYVVAVVK3	4604.01	9357.6	3656.26
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	CVNEPGR	C(UniMod:4)VNEPGR	2	C(UniMod:4)VNEPGR2			119606
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	CVNGMCICDDDYTGEDCR	C(UniMod:4)VNGMC(UniMod:4)IC(UniMod:4)DDDYTGEDC(UniMod:4)R	3	C(UniMod:4)VNGMC(UniMod:4)IC(UniMod:4)DDDYTGEDC(UniMod:4)R3	20203.6	19532.1	19392.2
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	CVNGMCICDDDYTGEDCRDR	C(UniMod:4)VNGMC(UniMod:4)IC(UniMod:4)DDDYTGEDC(UniMod:4)RDR	3	C(UniMod:4)VNGMC(UniMod:4)IC(UniMod:4)DDDYTGEDC(UniMod:4)RDR3	37239.5	57497.4	41858.1
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	CVNGQCICHEGFTGK	C(UniMod:4)VNGQC(UniMod:4)IC(UniMod:4)HEGFTGK	2	C(UniMod:4)VNGQC(UniMod:4)IC(UniMod:4)HEGFTGK2	30039.1	19871.9	15816.7
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	CVNGQCICHEGFTGK	C(UniMod:4)VNGQC(UniMod:4)IC(UniMod:4)HEGFTGK	3	C(UniMod:4)VNGQC(UniMod:4)IC(UniMod:4)HEGFTGK3	433123	581569	510902
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	CVNGQCVCDEGYTGEDCSQR	C(UniMod:4)VNGQC(UniMod:4)VC(UniMod:4)DEGYTGEDC(UniMod:4)SQR	3	C(UniMod:4)VNGQC(UniMod:4)VC(UniMod:4)DEGYTGEDC(UniMod:4)SQR3	64052.2	86318.4	73994
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	CVNGQCVCDEGYTGEDCSQRR	C(UniMod:4)VNGQC(UniMod:4)VC(UniMod:4)DEGYTGEDC(UniMod:4)SQRR	3	C(UniMod:4)VNGQC(UniMod:4)VC(UniMod:4)DEGYTGEDC(UniMod:4)SQRR3	28451.6	42473.1	40811
O35568	O35568	FBLN3_RAT	Efemp1	EGF-containing fibulin-like extracellular matrix protein 1	1	CVNHYGGYLCLPK	C(UniMod:4)VNHYGGYLC(UniMod:4)LPK	2	C(UniMod:4)VNHYGGYLC(UniMod:4)LPK2	1403.96	3664.54	
O35568	O35568	FBLN3_RAT	Efemp1	EGF-containing fibulin-like extracellular matrix protein 1	1	CVNHYGGYLCLPK	C(UniMod:4)VNHYGGYLC(UniMod:4)LPK	3	C(UniMod:4)VNHYGGYLC(UniMod:4)LPK3	29861.4	34866.5	33227.9
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	CVNLPGSFR	C(UniMod:4)VNLPGSFR	2	C(UniMod:4)VNLPGSFR2	326142	349835	350682
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	CVNLVQK	C(UniMod:4)VNLVQK	2	C(UniMod:4)VNLVQK2	20558.7	25053.9	13763.9
A2VCX1	A2VCX1	TIPRL_RAT	Tiprl	TIP41-like protein	1	CVNNYQGMLK	C(UniMod:4)VNNYQGMLK	2	C(UniMod:4)VNNYQGMLK2	7616.21	5423.86	
D4A2G6	D4A2G6	D4A2G6_RAT	Thbs2	Thrombospondin 2	1	CVNTNPGFHCLPCPPR	C(UniMod:4)VNTNPGFHC(UniMod:4)LPC(UniMod:4)PPR	3	C(UniMod:4)VNTNPGFHC(UniMod:4)LPC(UniMod:4)PPR3	28126.6	13436.2	19165.3
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	CVNTTLQIK	C(UniMod:4)VNTTLQIK	2	C(UniMod:4)VNTTLQIK2	207296	205807	195816
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CVNTYGSYECK	C(UniMod:4)VNTYGSYEC(UniMod:4)K	2	C(UniMod:4)VNTYGSYEC(UniMod:4)K2	779.144	1866.42	
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	CVNWDLPQEAK	C(UniMod:4)VNWDLPQEAK	2	C(UniMod:4)VNWDLPQEAK2	5393.89	3087.54	10081.7
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	CVPGHPSHWSDPPPICR	C(UniMod:4)VPGHPSHWSDPPPIC(UniMod:4)R	3	C(UniMod:4)VPGHPSHWSDPPPIC(UniMod:4)R3	19366.5	19815.3	9644.5
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	CVPGHPSHWSDPPPICR	C(UniMod:4)VPGHPSHWSDPPPIC(UniMod:4)R	4	C(UniMod:4)VPGHPSHWSDPPPIC(UniMod:4)R4	44475.7	63923	53081.3
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	CVPLSDPDSNFQGLQAHLLQHVR	C(UniMod:4)VPLSDPDSNFQGLQAHLLQHVR	4	C(UniMod:4)VPLSDPDSNFQGLQAHLLQHVR4	7377.83	6840.34	
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	CVPQIIAFLHNK	C(UniMod:4)VPQIIAFLHNK	2	C(UniMod:4)VPQIIAFLHNK2	10169.2	12042	
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	CVPQIIAFLHNK	C(UniMod:4)VPQIIAFLHNK	3	C(UniMod:4)VPQIIAFLHNK3	25328.3	18365.7	17377
D3ZML4	D3ZML4	D3ZML4_RAT	Trabd	TraB domain containing	1	CVPSVVVGVVGMGHVPGIEK	C(UniMod:4)VPSVVVGVVGMGHVPGIEK	3	C(UniMod:4)VPSVVVGVVGMGHVPGIEK3	2271.16	4083.24	5085.87
Q6AXY8	Q6AXY8	Q6AXY8_RAT	Dhrs1	Dehydrogenase/reductase 1	1	CVPVVCDSSQESEVK	C(UniMod:4)VPVVC(UniMod:4)DSSQESEVK	2	C(UniMod:4)VPVVC(UniMod:4)DSSQESEVK2	12875.5	19646.6	21588.2
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	CVPYWPEVGTQR	C(UniMod:4)VPYWPEVGTQR	2	C(UniMod:4)VPYWPEVGTQR2	19101.4	19261.9	17718.3
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	CVQGVCVCR	C(UniMod:4)VQGVC(UniMod:4)VC(UniMod:4)R	2	C(UniMod:4)VQGVC(UniMod:4)VC(UniMod:4)R2	30215.9	29138.6	22838.5
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	CVQQTIETIEENIR	C(UniMod:4)VQQTIETIEENIR	2	C(UniMod:4)VQQTIETIEENIR2	5629.55	6803.02	9986.17
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	CVQSCSVSYYLDHSLEGGYK	C(UniMod:4)VQSC(UniMod:4)SVSYYLDHSLEGGYK	3	C(UniMod:4)VQSC(UniMod:4)SVSYYLDHSLEGGYK3	39275.1	51161.5	43104.6
P13264	P13264	GLSK_RAT	Gls	Glutaminase kidney isoform, mitochondrial	1	CVQSNIVLLTQAFR	C(UniMod:4)VQSNIVLLTQAFR	2	C(UniMod:4)VQSNIVLLTQAFR2	6177.22	4889.72	6913.35
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	CVQTAHNILK	C(UniMod:4)VQTAHNILK	2	C(UniMod:4)VQTAHNILK2	21827.3	19652.2	10585.5
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	CVQTAHNILK	C(UniMod:4)VQTAHNILK	3	C(UniMod:4)VQTAHNILK3	357949	442104	394201
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	CVQTLSHK	C(UniMod:4)VQTLSHK	2	C(UniMod:4)VQTLSHK2			210039
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	CVSALGR	C(UniMod:4)VSALGR	2	C(UniMod:4)VSALGR2	570104	599250	664701
Q32PY2	Q32PY2	LIPH_RAT	Liph	Lipase member H	1	CVSCGAGHIVSCPSLGYYADNWR	C(UniMod:4)VSC(UniMod:4)GAGHIVSC(UniMod:4)PSLGYYADNWR	3	C(UniMod:4)VSC(UniMod:4)GAGHIVSC(UniMod:4)PSLGYYADNWR3	4450.12		3103.47
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	CVSCLPGQR	C(UniMod:4)VSC(UniMod:4)LPGQR	2	C(UniMod:4)VSC(UniMod:4)LPGQR2	1.56082e+06	1.37426e+06	1.31537e+06
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	CVSDESLPFDLR	C(UniMod:4)VSDESLPFDLR	2	C(UniMod:4)VSDESLPFDLR2	5851.9	6604.15	
B1WBV4	B1WBV4	B1WBV4_RAT	Plekhf2	Pleckstrin homology and FYVE domain containing 2	1	CVSDLLSK	C(UniMod:4)VSDLLSK	2	C(UniMod:4)VSDLLSK2	79981.3	62161.9	76080.6
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	CVSEPTFYR	C(UniMod:4)VSEPTFYR	2	C(UniMod:4)VSEPTFYR2	28101.4	37895.1	21819.4
A0A8I6AF96	A0A8I6GJQ5;A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	0	CVSFILR	C(UniMod:4)VSFILR	2	C(UniMod:4)VSFILR2	27017.5	34332.5	44632.2
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	CVSGELSAEK	C(UniMod:4)VSGELSAEK	2	C(UniMod:4)VSGELSAEK2		12103.1	9988.47
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	CVSLILDLSLKPHPSHLPK	C(UniMod:4)VSLILDLSLKPHPSHLPK	3	C(UniMod:4)VSLILDLSLKPHPSHLPK3	20172.9	20595	9582.51
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	CVSLILDLSLKPHPSHLPK	C(UniMod:4)VSLILDLSLKPHPSHLPK	4	C(UniMod:4)VSLILDLSLKPHPSHLPK4	44910.3	62337.7	53679.9
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	CVSNSIPGCVK	C(UniMod:4)VSNSIPGC(UniMod:4)VK	2	C(UniMod:4)VSNSIPGC(UniMod:4)VK2	52892.1	57715.8	26830.7
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	CVSQVICK	C(UniMod:4)VSQVIC(UniMod:4)K	2	C(UniMod:4)VSQVIC(UniMod:4)K2	395954	328756	356687
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	CVSRPGGYTCACDPGFR	C(UniMod:4)VSRPGGYTC(UniMod:4)AC(UniMod:4)DPGFR	3	C(UniMod:4)VSRPGGYTC(UniMod:4)AC(UniMod:4)DPGFR3	105391	113617	101898
D4A1A5	A0A8I6A6K6;Q80W83;A0A8I5ZMG6;D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	0	CVSSPHFQVAER	C(UniMod:4)VSSPHFQVAER	3	C(UniMod:4)VSSPHFQVAER3	97446.9	84751.1	91080.8
D3ZDI7	A0A8I6A7U3;D3ZDI7	D3ZDI7_RAT	Ppp2r5a	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	0	CVSSSHFQVAER	C(UniMod:4)VSSSHFQVAER	3	C(UniMod:4)VSSSHFQVAER3	19233.6	28876.9	20546
P62944	P52303;P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	CVSTLLDLIQTK	C(UniMod:4)VSTLLDLIQTK	2	C(UniMod:4)VSTLLDLIQTK2	35294	36268.6	29049.7
Q8R492	Q8R492	Q8R492_RAT	Fap	Fibroblast activation protein, alpha	1	CVTCHLR	C(UniMod:4)VTC(UniMod:4)HLR	2	C(UniMod:4)VTC(UniMod:4)HLR2	3671.1	4192.24	
Q62918	Q62918	NELL2_RAT	Nell2	Protein kinase C-binding protein NELL2	1	CVTDPCQADTIR	C(UniMod:4)VTDPC(UniMod:4)QADTIR	2	C(UniMod:4)VTDPC(UniMod:4)QADTIR2	7364.64	1187	2945.29
Q63189	Q63189	PRG2_RAT	Prg2	Bone marrow proteoglycan	1	CVTLCTR	C(UniMod:4)VTLC(UniMod:4)TR	2	C(UniMod:4)VTLC(UniMod:4)TR2	24646.3	26329.6	34636
D3ZER6	D3ZER6	D3ZER6_RAT	Tnpo2	Transportin 2	1	CVTLVQK	C(UniMod:4)VTLVQK	2	C(UniMod:4)VTLVQK2	10713.2	13903.1	7286.79
Q5RK09	Q5RK09	EIF3G_RAT	Eif3g	Eukaryotic translation initiation factor 3 subunit G	1	CVTSELLK	C(UniMod:4)VTSELLK	2	C(UniMod:4)VTSELLK2	164278	160047	164685
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	CVVAAFWADVDNRR	C(UniMod:4)VVAAFWADVDNRR	3	C(UniMod:4)VVAAFWADVDNRR3	45099.6	25982.9	41698.9
Q6AXY8	Q6AXY8	Q6AXY8_RAT	Dhrs1	Dehydrogenase/reductase 1	1	CVVALATDPNILSLSGK	C(UniMod:4)VVALATDPNILSLSGK	2	C(UniMod:4)VVALATDPNILSLSGK2	17025.5	9867.96	8398.18
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	CVVDVEANK	C(UniMod:4)VVDVEANK	2	C(UniMod:4)VVDVEANK2	23101.6	31044.5	30781.7
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	CVVLSWQGGGGDAASSQEALQAAR	C(UniMod:4)VVLSWQGGGGDAASSQEALQAAR	3	C(UniMod:4)VVLSWQGGGGDAASSQEALQAAR3	3570.89	5979.95	4489.51
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	CVVQPEAGDLNNPPK	C(UniMod:4)VVQPEAGDLNNPPK	2	C(UniMod:4)VVQPEAGDLNNPPK2	51682.4	49756.9	55710.8
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	CVVQPEAGDLNNPPK	C(UniMod:4)VVQPEAGDLNNPPK	3	C(UniMod:4)VVQPEAGDLNNPPK3	12002	2391.69	12776.4
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	CVVQPEAGDLNNPPKK	C(UniMod:4)VVQPEAGDLNNPPKK	3	C(UniMod:4)VVQPEAGDLNNPPKK3	4982.59	4718.15	5191.04
D4A0J7	D4A0J7	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	1	CVVRPLGR	C(UniMod:4)VVRPLGR	2	C(UniMod:4)VVRPLGR2	5424.57	6951.22	8356
D3ZFS7	D3ZFS7	D3ZFS7_RAT	Lyplal1	palmitoyl-protein hydrolase	1	CVVSPAGR	C(UniMod:4)VVSPAGR	2	C(UniMod:4)VVSPAGR2	11317.4	10216.3	11790.3
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	CVVTAEDGTQSEATVNVK	C(UniMod:4)VVTAEDGTQSEATVNVK	2	C(UniMod:4)VVTAEDGTQSEATVNVK2	131893	128863	123232
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	CVVTAEDGTQSEATVNVK	C(UniMod:4)VVTAEDGTQSEATVNVK	3	C(UniMod:4)VVTAEDGTQSEATVNVK3	75909.1	73357	55372
D3ZP29	D3ZP29	D3ZP29_RAT	Icam4	Intercellular adhesion molecule 4, Landsteiner-Wiener blood group	1	CVVTCAGETR	C(UniMod:4)VVTC(UniMod:4)AGETR	2	C(UniMod:4)VVTC(UniMod:4)AGETR2	8517.08	2599.95	7431.14
Q6RUV5	Q8CFN2;Q5RJS2;Q9JJL4;Q6RUV5;A0A8I6ANG6;Q32PX6	RAC1_RAT	Rac1	Ras-related C3 botulinum toxin substrate 1	0	CVVVGDGAVGK	C(UniMod:4)VVVGDGAVGK	2	C(UniMod:4)VVVGDGAVGK2	28568.4	24980.4	24489.6
P61943	P61943	SIA10_RAT	St3gal6	Type 2 lactosamine alpha-2,3-sialyltransferase	1	CVVVGNGGVLK	C(UniMod:4)VVVGNGGVLK	2	C(UniMod:4)VVVGNGGVLK2	3141.91	1233.87	3168.62
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	CVWDLTDDLR	C(UniMod:4)VWDLTDDLR	2	C(UniMod:4)VWDLTDDLR2	17633.7	15850.3	19571.6
A0A1W2Q642	A0A1W2Q642	A0A1W2Q642_RAT	Pi16	Peptidase inhibitor 16	1	CVWGHNK	C(UniMod:4)VWGHNK	1	C(UniMod:4)VWGHNK1	21790.5	24632.2	21947.1
A0A1W2Q642	A0A1W2Q642	A0A1W2Q642_RAT	Pi16	Peptidase inhibitor 16	1	CVWGHNK	C(UniMod:4)VWGHNK	2	C(UniMod:4)VWGHNK2	1.58775e+06	1.73614e+06	1.59729e+06
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	CVYFFWQGR	C(UniMod:4)VYFFWQGR	2	C(UniMod:4)VYFFWQGR2	15261.5	12260.8	16598.8
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	CVYKPLQPGPHVVK	C(UniMod:4)VYKPLQPGPHVVK	4	C(UniMod:4)VYKPLQPGPHVVK4	544.147	2650.37	5167.31
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	CVYMDNANEPHNVIILK	C(UniMod:4)VYMDNANEPHNVIILK	3	C(UniMod:4)VYMDNANEPHNVIILK3	22378.7	24998.1	11764.1
Q4QR85	Q4QR85	MEP50_RAT	Wdr77	Methylosome protein WDR77	1	CWAGSLWFFK	C(UniMod:4)WAGSLWFFK	2	C(UniMod:4)WAGSLWFFK2	32271	30560.5	22372.8
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	CWAQGMDGWRPLQAIPQLK	C(UniMod:4)WAQGMDGWRPLQAIPQLK	3	C(UniMod:4)WAQGMDGWRPLQAIPQLK3	5971.06	6296.55	
Q60GF7	Q60GF7	PIGX_RAT	Pigx	Phosphatidylinositol-glycan biosynthesis class X protein	1	CWAQSEVAAPCSLK	C(UniMod:4)WAQSEVAAPC(UniMod:4)SLK	2	C(UniMod:4)WAQSEVAAPC(UniMod:4)SLK2	4784.16	1021.01	6670.66
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	CWDECIASSQYLAR	C(UniMod:4)WDEC(UniMod:4)IASSQYLAR	2	C(UniMod:4)WDEC(UniMod:4)IASSQYLAR2	23067.8	18665.1	26877.1
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	CWDECIASSQYLAR	C(UniMod:4)WDEC(UniMod:4)IASSQYLAR	3	C(UniMod:4)WDEC(UniMod:4)IASSQYLAR3	11171.3	7216.02	14065.7
D4A0W1	D4A0W1	D4A0W1_RAT	Emc4	ER membrane protein complex subunit 4	1	CWDIALGPLK	C(UniMod:4)WDIALGPLK	2	C(UniMod:4)WDIALGPLK2	24029.5	12251.3	17650.7
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	CWDYDPSDRPR	C(UniMod:4)WDYDPSDRPR	3	C(UniMod:4)WDYDPSDRPR3	101463	107613	77241.8
Q3SWS8	Q3SWS8	RAE1L_RAT	Rae1	mRNA export factor	1	CWEVQDSGQTIPK	C(UniMod:4)WEVQDSGQTIPK	2	C(UniMod:4)WEVQDSGQTIPK2	5525.16	7513.52	6153.14
Q5M7T1	Q5M7T1	CIAO1_RAT	Ciao1	Probable cytosolic iron-sulfur protein assembly protein CIAO1	1	CWFLAWNPTGTLLASCGGDR	C(UniMod:4)WFLAWNPTGTLLASC(UniMod:4)GGDR	3	C(UniMod:4)WFLAWNPTGTLLASC(UniMod:4)GGDR3	5404.92	4464.06	1540.42
Q5M7T1	Q5M7T1	CIAO1_RAT	Ciao1	Probable cytosolic iron-sulfur protein assembly protein CIAO1	1	CWFLAWNPTGTLLASCGGDRK	C(UniMod:4)WFLAWNPTGTLLASC(UniMod:4)GGDRK	3	C(UniMod:4)WFLAWNPTGTLLASC(UniMod:4)GGDRK3	8055.13	19856.9	16679.2
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	CWGPTQDDCISCPITR	C(UniMod:4)WGPTQDDC(UniMod:4)ISC(UniMod:4)PITR	3	C(UniMod:4)WGPTQDDC(UniMod:4)ISC(UniMod:4)PITR3	48358.9	40159.6	38933.3
P70645	P70645	BLMH_RAT	Blmh	Bleomycin hydrolase	1	CWIFSCLNVMR	C(UniMod:4)WIFSC(UniMod:4)LNVMR	2	C(UniMod:4)WIFSC(UniMod:4)LNVMR2	21514.6	32988.5	28672.6
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	CWLNGGAMPEAR	C(UniMod:4)WLNGGAMPEAR	2	C(UniMod:4)WLNGGAMPEAR2	30672.3	25713.6	18845.5
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	CWQEDELFGYQFLNGANPMLLR	C(UniMod:4)WQEDELFGYQFLNGANPMLLR	3	C(UniMod:4)WQEDELFGYQFLNGANPMLLR3	21351.9	18660.5	21371.9
D3ZYL0	D3ZYL0	D3ZYL0_RAT	Ripk1	Receptor interacting serine/threonine kinase 1	1	CWQTNPEDRPTFFGIEK	C(UniMod:4)WQTNPEDRPTFFGIEK	3	C(UniMod:4)WQTNPEDRPTFFGIEK3		6347.48	
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	CWQTNTQYHCECR	C(UniMod:4)WQTNTQYHC(UniMod:4)EC(UniMod:4)R	3	C(UniMod:4)WQTNTQYHC(UniMod:4)EC(UniMod:4)R3	17431.5	4671.95	9421.24
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CWSPGVTVAPEMCPIR	C(UniMod:4)WSPGVTVAPEMC(UniMod:4)PIR	2	C(UniMod:4)WSPGVTVAPEMC(UniMod:4)PIR2	17030.7	17750.5	16745.3
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	CWSPGVTVAPEMCPIR	C(UniMod:4)WSPGVTVAPEMC(UniMod:4)PIR	3	C(UniMod:4)WSPGVTVAPEMC(UniMod:4)PIR3	3854.21	11955.6	9901.73
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	CWVTLGAR	C(UniMod:4)WVTLGAR	2	C(UniMod:4)WVTLGAR2	58236.1	64839.7	51862.5
D3ZWU9	D3ZWU9	D3ZWU9_RAT	Rmnd5a	RING-type E3 ubiquitin transferase	1	CWYHSIFACPILR	C(UniMod:4)WYHSIFAC(UniMod:4)PILR	3	C(UniMod:4)WYHSIFAC(UniMod:4)PILR3	8463.83	6539	2870.51
Q6BBI8	Q6BBI8	UFC1_RAT	Ufc1	Ubiquitin-fold modifier-conjugating enzyme 1	1	CWYIHDFLK	C(UniMod:4)WYIHDFLK	3	C(UniMod:4)WYIHDFLK3	8450.9	6297.53	2180.95
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	CYAGWLADGTLR	C(UniMod:4)YAGWLADGTLR	2	C(UniMod:4)YAGWLADGTLR2	63625.7	82383.9	49904.3
Q05695	Q05695	L1CAM_RAT	L1cam	Neural cell adhesion molecule L1	1	CYASNNLGTAMSHEIQLVAEGAPK	C(UniMod:4)YASNNLGTAMSHEIQLVAEGAPK	3	C(UniMod:4)YASNNLGTAMSHEIQLVAEGAPK3	10639.9	7978.84	3724.76
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	CYAYIETSSNPADIYR	C(UniMod:4)YAYIETSSNPADIYR	2	C(UniMod:4)YAYIETSSNPADIYR2	7840.26	11295.3	7599.56
Q3SWS8	Q3SWS8	RAE1L_RAT	Rae1	mRNA export factor	1	CYCADVIYPMAVVATAER	C(UniMod:4)YC(UniMod:4)ADVIYPMAVVATAER	3	C(UniMod:4)YC(UniMod:4)ADVIYPMAVVATAER3		6430.23	3089.85
Q5PQQ8	Q5PQQ8	ITGBL_RAT	Itgbl1	Integrin beta-like protein 1	1	CYCGNCYCEAGWHGDK	C(UniMod:4)YC(UniMod:4)GNC(UniMod:4)YC(UniMod:4)EAGWHGDK	3	C(UniMod:4)YC(UniMod:4)GNC(UniMod:4)YC(UniMod:4)EAGWHGDK3	4473.04	8798.73	11199.8
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	CYCMTDDK	C(UniMod:4)YC(UniMod:4)MTDDK	2	C(UniMod:4)YC(UniMod:4)MTDDK2	2601.73	1941.6	1873.99
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	CYCQAMQVYK	C(UniMod:4)YC(UniMod:4)QAMQVYK	2	C(UniMod:4)YC(UniMod:4)QAMQVYK2	7212.62	7393.17	7808.35
Q6MG58	Q6MG58	LY66D_RAT	Ly6g6d	Lymphocyte antigen 6 complex locus protein G6d	1	CYDCGGGPSNSCK	C(UniMod:4)YDC(UniMod:4)GGGPSNSC(UniMod:4)K	2	C(UniMod:4)YDC(UniMod:4)GGGPSNSC(UniMod:4)K2	4500.49		10031.4
Q4V884	Q4V884	Q4V884_RAT	Cdc16	CDC16 cell division cycle 16 homolog (S. cerevisiae)	1	CYDFDVHTMK	C(UniMod:4)YDFDVHTMK	3	C(UniMod:4)YDFDVHTMK3	7205.91	13467.9	10654.6
O35370	O35370	O35370_RAT	Thbd	Thrombomodulin	1	CYDGYELVDGECVEQLDPCFR	C(UniMod:4)YDGYELVDGEC(UniMod:4)VEQLDPC(UniMod:4)FR	3	C(UniMod:4)YDGYELVDGEC(UniMod:4)VEQLDPC(UniMod:4)FR3	33514.3	42689.9	48512.3
P80385	P80385	AAKG1_RAT	Prkag1	5'-AMP-activated protein kinase subunit gamma-1	1	CYDLIPTSSK	C(UniMod:4)YDLIPTSSK	2	C(UniMod:4)YDLIPTSSK2	33806.7	36506	33057.9
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	CYDVSVTLHGDHAGLR	C(UniMod:4)YDVSVTLHGDHAGLR	3	C(UniMod:4)YDVSVTLHGDHAGLR3	4927.64	5858.51	8596.92
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	CYDVSVTLHGDHAGLR	C(UniMod:4)YDVSVTLHGDHAGLR	4	C(UniMod:4)YDVSVTLHGDHAGLR4	6795.07	7592.83	6061.85
A0A8I6AFZ5	A0A8I6AFZ5	A0A8I6AFZ5_RAT	Srsf7	Serine and arginine rich splicing factor 7	1	CYECGEK	C(UniMod:4)YEC(UniMod:4)GEK	2	C(UniMod:4)YEC(UniMod:4)GEK2			2547.06
P62963	P62963	PROF1_RAT	Pfn1	Profilin-1	1	CYEMASHLR	C(UniMod:4)YEMASHLR	2	C(UniMod:4)YEMASHLR2	259848	382645	360790
P62963	P62963	PROF1_RAT	Pfn1	Profilin-1	1	CYEMASHLR	C(UniMod:4)YEMASHLR	3	C(UniMod:4)YEMASHLR3	1.56633e+06	1.60976e+06	1.56083e+06
P62963	P62963	PROF1_RAT	Pfn1	Profilin-1	1	CYEMASHLRR	C(UniMod:4)YEMASHLRR	3	C(UniMod:4)YEMASHLRR3	10389.8	8575.99	16061.9
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	CYEQELER	C(UniMod:4)YEQELER	2	C(UniMod:4)YEQELER2	43799.7	35560.1	49249.4
A0A8I6G1Q9	A0A8I6G1Q9	A0A8I6G1Q9_RAT	Cd69	Cd69 molecule	1	CYFFSTTTK	C(UniMod:4)YFFSTTTK	2	C(UniMod:4)YFFSTTTK2	4662.86		8173.81
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	CYGCASAVTEHCITLLR	C(UniMod:4)YGC(UniMod:4)ASAVTEHC(UniMod:4)ITLLR	3	C(UniMod:4)YGC(UniMod:4)ASAVTEHC(UniMod:4)ITLLR3	18895.9	9734.68	10266.2
O88453	O88453	SAFB1_RAT	Safb	Scaffold attachment factor B1	1	CYGFVTMSTAEEATK	C(UniMod:4)YGFVTMSTAEEATK	2	C(UniMod:4)YGFVTMSTAEEATK2	2434.73	2758.41	
A0A8I6AUY4	A0A8I6AUY4	A0A8I6AUY4_RAT	Mrps30	Mitochondrial ribosomal protein S30	1	CYGHTQFHLLPDILNR	C(UniMod:4)YGHTQFHLLPDILNR	4	C(UniMod:4)YGHTQFHLLPDILNR4		7321.48	4471.92
F1M7P8	F1M7P8	F1M7P8_RAT	Spryd3	SPRY domain containing 3	1	CYIALGLAR	C(UniMod:4)YIALGLAR	2	C(UniMod:4)YIALGLAR2	6587.81	10458.1	14054.1
P70483	P70483	STRN_RAT	Strn	Striatin	1	CYIASAGADALAK	C(UniMod:4)YIASAGADALAK	2	C(UniMod:4)YIASAGADALAK2	151577	116718	134664
P70483	P70483	STRN_RAT	Strn	Striatin	1	CYIASAGADALAK	C(UniMod:4)YIASAGADALAK	3	C(UniMod:4)YIASAGADALAK3		4640.25	4268.89
P80385	P80385	AAKG1_RAT	Prkag1	5'-AMP-activated protein kinase subunit gamma-1	1	CYLHETLEAIINR	C(UniMod:4)YLHETLEAIINR	3	C(UniMod:4)YLHETLEAIINR3	6302.1	9564.16	8396.62
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	CYLHTNVALVAPLLR	C(UniMod:4)YLHTNVALVAPLLR	3	C(UniMod:4)YLHTNVALVAPLLR3	9534.9	5529.05	5485.46
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	CYLTIPNK	C(UniMod:4)YLTIPNK	2	C(UniMod:4)YLTIPNK2	26287.3	20309.8	24945.8
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	CYLTMTQALEAR	C(UniMod:4)YLTMTQALEAR	2	C(UniMod:4)YLTMTQALEAR2	137117	147493	137317
P27274	P27274	CD59_RAT	Cd59	CD59 glycoprotein	1	CYNCLDPVSSCK	C(UniMod:4)YNC(UniMod:4)LDPVSSC(UniMod:4)K	2	C(UniMod:4)YNC(UniMod:4)LDPVSSC(UniMod:4)K2	58658.2	62207.7	68580.7
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	CYNEMALIR	C(UniMod:4)YNEMALIR	2	C(UniMod:4)YNEMALIR2	319943	307351	336806
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	CYPCQNGGTAILLDGQCMCSCTIK	C(UniMod:4)YPC(UniMod:4)QNGGTAILLDGQC(UniMod:4)MC(UniMod:4)SC(UniMod:4)TIK	3	C(UniMod:4)YPC(UniMod:4)QNGGTAILLDGQC(UniMod:4)MC(UniMod:4)SC(UniMod:4)TIK3	5797.14	3526.16	4785.9
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	CYPDRVDYVDK	C(UniMod:4)YPDRVDYVDK	3	C(UniMod:4)YPDRVDYVDK3	30859		
O35568	O35568	FBLN3_RAT	Efemp1	EGF-containing fibulin-like extracellular matrix protein 1	1	CYPQNPCQDPYVLTSENR	C(UniMod:4)YPQNPC(UniMod:4)QDPYVLTSENR	3	C(UniMod:4)YPQNPC(UniMod:4)QDPYVLTSENR3	12549.8	13089.4	14926.8
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	CYQGTDIVR	C(UniMod:4)YQGTDIVR	2	C(UniMod:4)YQGTDIVR2	240085	257911	299019
Q6IRJ7	Q6IRJ7;A0A8I5ZY79	Q6IRJ7_RAT	Anxa7	Annexin	0	CYQLEFGR	C(UniMod:4)YQLEFGR	2	C(UniMod:4)YQLEFGR2	61093.7	48806.9	59408.8
Q5BJR4	Q5BJR4	PRUN2_RAT	Prune2	Protein prune homolog 2	1	CYQMIDR	C(UniMod:4)YQMIDR	2	C(UniMod:4)YQMIDR2	10862.6	6937.75	4448.35
Q4V8F3	Q4V8F3	RHBL4_RAT	Rhbdd1	Rhomboid-related protein 4	1	CYQQNDWQR	C(UniMod:4)YQQNDWQR	2	C(UniMod:4)YQQNDWQR2	7548.46	11733.9	6098.83
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	CYQSVTAR	C(UniMod:4)YQSVTAR	2	C(UniMod:4)YQSVTAR2	33196.5	30741.2	34921.3
Q9QWG5	Q9QWG5	INP4B_RAT	Inpp4b	Type II inositol 3,4-bisphosphate 4-phosphatase	1	CYRPPEGTYGK	C(UniMod:4)YRPPEGTYGK	3	C(UniMod:4)YRPPEGTYGK3	6043.07	6308.92	10870.8
P62634	P62634	CNBP_RAT	Cnbp	CCHC-type zinc finger nucleic acid binding protein	1	CYSCGEFGHIQK	C(UniMod:4)YSC(UniMod:4)GEFGHIQK	2	C(UniMod:4)YSC(UniMod:4)GEFGHIQK2	738.246	1989.67	1821.11
P62634	P62634	CNBP_RAT	Cnbp	CCHC-type zinc finger nucleic acid binding protein	1	CYSCGEFGHIQK	C(UniMod:4)YSC(UniMod:4)GEFGHIQK	3	C(UniMod:4)YSC(UniMod:4)GEFGHIQK3	8399.19	10323	8335.17
C0HJX2;C0HJX3	C0HJX3;C0HJX2	LRB3A_RAT;LRB3B_RAT	Lilrb3a;Lilrb3b	Leukocyte immunoglobulin-like receptor subfamily B member 3A	0	CYSYETNTPQVWSAPSEPVEILVSGK	C(UniMod:4)YSYETNTPQVWSAPSEPVEILVSGK	4	C(UniMod:4)YSYETNTPQVWSAPSEPVEILVSGK4	6760.63	9672.57	
G3V6G1	G3V6G1	G3V6G1_RAT	Jchain	Joining chain of multimeric IgA and IgM	1	CYTAMVPLR	C(UniMod:4)YTAMVPLR	2	C(UniMod:4)YTAMVPLR2	2.96763e+06	2.82559e+06	3.0706e+06
G3V6G1	G3V6G1	G3V6G1_RAT	Jchain	Joining chain of multimeric IgA and IgM	1	CYTAMVPLRYHGETK	C(UniMod:4)YTAMVPLRYHGETK	3	C(UniMod:4)YTAMVPLRYHGETK3			57586.2
G3V6G1	G3V6G1	G3V6G1_RAT	Jchain	Joining chain of multimeric IgA and IgM	1	CYTAMVPLRYHGETK	C(UniMod:4)YTAMVPLRYHGETK	4	C(UniMod:4)YTAMVPLRYHGETK4	4876.02	8956.68	13849.7
Q5RJQ4	Q5RJQ4	SIR2_RAT	Sirt2	NAD-dependent protein deacetylase sirtuin-2	1	CYTQNIDTLER	C(UniMod:4)YTQNIDTLER	2	C(UniMod:4)YTQNIDTLER2	14136.9	18951.4	6164.57
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	CYVLSQNLR	C(UniMod:4)YVLSQNLR	2	C(UniMod:4)YVLSQNLR2	211835	259718	262687
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	CYWGFHSHFSR	C(UniMod:4)YWGFHSHFSR	3	C(UniMod:4)YWGFHSHFSR3	1464.94	6885.28	
F1LMQ3	F1LMQ3;A0A8I6ADL0	F1LMQ3_RAT	Psmd8	26S proteasome non-ATPase regulatory subunit 8	0	CYYFDYK	C(UniMod:4)YYFDYK	2	C(UniMod:4)YYFDYK2	6018.32	7830.18	6688.13
P61212	P61212	ARL1_RAT	Arl1	ADP-ribosylation factor-like protein 1	1	CYYSNTDAVIYVVDSCDRDR	C(UniMod:4)YYSNTDAVIYVVDSC(UniMod:4)DRDR	3	C(UniMod:4)YYSNTDAVIYVVDSC(UniMod:4)DRDR3	27079.4	36220.8	38364.2
A0A8I6GIU6	A0A8I6GIU6	A0A8I6GIU6_RAT	Tial1	Tia1 cytotoxic granule-associated RNA binding protein-like 1	1	DAAAALAAMNGR	DAAAALAAMNGR	2	DAAAALAAMNGR2	3456.13		
D4A0J7	D4A0J7	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	1	DAAAAYAHPEEQYEER	DAAAAYAHPEEQYEER	3	DAAAAYAHPEEQYEER3	5249	8160.42	8206.06
Q9QUR2	Q9QUR2	DCTN4_RAT	Dctn4	Dynactin subunit 4	1	DAAAEYDELAEPQDFQDDPDIVAFR	DAAAEYDELAEPQDFQDDPDIVAFR	3	DAAAEYDELAEPQDFQDDPDIVAFR3	5815.09	7811.02	5847.7
Q9Z1A5	Q9Z1A5	ULA1_RAT	Nae1	NEDD8-activating enzyme E1 regulatory subunit	1	DAAAVGNHVAK	DAAAVGNHVAK	2	DAAAVGNHVAK2	7362.71	6941.06	
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	DAAAVLVSK	DAAAVLVSK	2	DAAAVLVSK2	95637.5	107035	90020.2
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	DAACYVCWAFAR	DAAC(UniMod:4)YVC(UniMod:4)WAFAR	2	DAAC(UniMod:4)YVC(UniMod:4)WAFAR2	14566.8	10947.2	14701.1
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	DAADFLLK	DAADFLLK	2	DAADFLLK2	25536.4	31048.3	25773.4
Q63942	Q63942	RAB3D_RAT	Rab3d	GTP-binding protein Rab-3D	1	DAADQNFDYMFK	DAADQNFDYMFK	2	DAADQNFDYMFK2	63717.6	80292	60985.3
P41562	P41562	IDHC_RAT	Idh1	Isocitrate dehydrogenase [NADP] cytoplasmic	1	DAAEAIKK	DAAEAIKK	2	DAAEAIKK2	14351.4		8364.63
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	DAAEEVAQEMVALGLVCEADYQPVAR	DAAEEVAQEMVALGLVC(UniMod:4)EADYQPVAR	3	DAAEEVAQEMVALGLVC(UniMod:4)EADYQPVAR3	2113.13		
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	DAAEMLGAK	DAAEMLGAK	2	DAAEMLGAK2	29000.2	29243.1	18036.2
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	DAAFEALGTALK	DAAFEALGTALK	2	DAAFEALGTALK2	92904.4	108887	113944
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	DAAGIAMEAIAFAR	DAAGIAMEAIAFAR	2	DAAGIAMEAIAFAR2	15728.8	20899	18878.2
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	DAAGIAMEAIAFAR	DAAGIAMEAIAFAR	3	DAAGIAMEAIAFAR3	3213.29	2531.92	4106.25
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	DAAHITPDNFELCVK	DAAHITPDNFELC(UniMod:4)VK	2	DAAHITPDNFELC(UniMod:4)VK2	2235.73	1051.96	
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	DAAHITPDNFELCVK	DAAHITPDNFELC(UniMod:4)VK	3	DAAHITPDNFELC(UniMod:4)VK3	21961.3	15947	9731.36
E9PSX4	E9PSX4	E9PSX4_RAT	Il3ra	Interleukin 3 receptor subunit alpha	1	DAAHLCFQPR	DAAHLC(UniMod:4)FQPR	3	DAAHLC(UniMod:4)FQPR3	15548.1	10022	18910.5
A0A8I5Y868	A0A8I5Y868	A0A8I5Y868_RAT	Klc2	Kinesin light chain	1	DAAHLLNDALAIR	DAAHLLNDALAIR	2	DAAHLLNDALAIR2	6995.09	6476.02	
A0A8I5Y868	A0A8I5Y868	A0A8I5Y868_RAT	Klc2	Kinesin light chain	1	DAAHLLNDALAIR	DAAHLLNDALAIR	3	DAAHLLNDALAIR3	24823.5	17040.6	23233.2
A2RUW1	A2RUW1	TOLIP_RAT	Tollip	Toll-interacting protein	1	DAAINSLLQMGEES	DAAINSLLQMGEES	2	DAAINSLLQMGEES2	14894.2	14480.8	13766.2
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	DAAINSLVEIYR	DAAINSLVEIYR	2	DAAINSLVEIYR2	10280.4	13058.3	4745.9
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	DAAITLK	DAAITLK	1	DAAITLK1	4482.88	1498.51	3070.81
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	DAAIYLVTSLASK	DAAIYLVTSLASK	2	DAAIYLVTSLASK2	61124.9	61987.2	
P70615	P70615	LMNB1_RAT	Lmnb1	Lamin-B1	1	DAALATALGDK	DAALATALGDK	2	DAALATALGDK2	8013.67		
B1WBV0	B1WBV0	CTU1_RAT	Ctu1	Cytoplasmic tRNA 2-thiolation protein 1	1	DAALEAVR	DAALEAVR	2	DAALEAVR2	4585.55	4992.05	7248.04
B2RYN7	B2RYN7	SPAST_RAT	Spast	Spastin	1	DAALGPIR	DAALGPIR	2	DAALGPIR2	8172.21	9032.64	8758.87
A0A0G2K999	A0A0G2K999	A0A0G2K999_RAT	Sdk2	Sidekick cell adhesion molecule 2	1	DAALVEVGK	DAALVEVGK	2	DAALVEVGK2	5572.58	2154.22	3589.94
A0A8I6AMS6	A0A8I6AMS6	A0A8I6AMS6_RAT	Rangap1	RAN GTPase activating protein 1	1	DAALVVAEAVADK	DAALVVAEAVADK	2	DAALVVAEAVADK2	11545.6	13847.4	14475.8
E9PU34	E9PU34	E9PU34_RAT	Rmnd1	Required for meiotic nuclear division 1 homolog	1	DAANILVMGVESSAK	DAANILVMGVESSAK	2	DAANILVMGVESSAK2	2305.88	4362.47	6164.66
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	DAANLLNDALAIR	DAANLLNDALAIR	2	DAANLLNDALAIR2	200820	195192	191143
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	DAANLLNDALAIR	DAANLLNDALAIR	3	DAANLLNDALAIR3	5531.75	13105.4	10356.1
Q498R1	Q498R1	MTRR_RAT	Mtrr	Methionine synthase reductase	1	DAAPEEEEEAPAK	DAAPEEEEEAPAK	2	DAAPEEEEEAPAK2	15817.6	9976.32	8951.02
P06214	P06214	HEM2_RAT	Alad	Delta-aminolevulinic acid dehydratase	1	DAAQSSPAFGDR	DAAQSSPAFGDR	2	DAAQSSPAFGDR2	27464.7	19060.9	13899.8
P06214	P06214	HEM2_RAT	Alad	Delta-aminolevulinic acid dehydratase	1	DAAQSSPAFGDRR	DAAQSSPAFGDRR	3	DAAQSSPAFGDRR3	38757.1	37869	52421.8
G3V8L0	G3V8L0	G3V8L0_RAT	Wdr24	GATOR complex protein WDR24	1	DAAQVVVAGR	DAAQVVVAGR	2	DAAQVVVAGR2	9183.53	14752.3	4985.82
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	DAASCMTVHDK	DAASC(UniMod:4)MTVHDK	2	DAASC(UniMod:4)MTVHDK2	2343.5	3830.61	2284.88
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	DAASCMTVHDK	DAASC(UniMod:4)MTVHDK	3	DAASC(UniMod:4)MTVHDK3	7055.29	4406.5	
P24155	P24155	THOP1_RAT	Thop1	Thimet oligopeptidase	1	DAASGEEIGK	DAASGEEIGK	2	DAASGEEIGK2	10088.3	13217.6	10168.1
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	DAASNDIPTLTK	DAASNDIPTLTK	2	DAASNDIPTLTK2	25086.5	31372.1	24545.7
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	DAATIMQPYFTSNGLVTK	DAATIMQPYFTSNGLVTK	2	DAATIMQPYFTSNGLVTK2	89449.2	99626.2	109667
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	DAATIMQPYFTSNGLVTK	DAATIMQPYFTSNGLVTK	3	DAATIMQPYFTSNGLVTK3	24044	39389.9	37132.1
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	DAATVKPTENNEEESASK	DAATVKPTENNEEESASK	3	DAATVKPTENNEEESASK3	6456.26	2283.1	7887.19
F1LSG7	F1LSG7	F1LSG7_RAT	Fgfr2	Fibroblast growth factor receptor	1	DAAVISWTK	DAAVISWTK	2	DAAVISWTK2	10027.3	8958.25	7688.87
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	DAAVLSFFHILNGAALR	DAAVLSFFHILNGAALR	3	DAAVLSFFHILNGAALR3	2410.59	4814.1	
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	DACAGDSGGPMVTK	DAC(UniMod:4)AGDSGGPMVTK	2	DAC(UniMod:4)AGDSGGPMVTK2	14899.3	13828	11657.4
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	DACAGDSGGPMVTK	DAC(UniMod:4)AGDSGGPMVTK	3	DAC(UniMod:4)AGDSGGPMVTK3	3694.91	7491.99	5612.72
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	DACDGDSGGPMVVFFR	DAC(UniMod:4)DGDSGGPMVVFFR	2	DAC(UniMod:4)DGDSGGPMVVFFR2	368125	313910	319877
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	DACDGDSGGPMVVFFR	DAC(UniMod:4)DGDSGGPMVVFFR	3	DAC(UniMod:4)DGDSGGPMVVFFR3	28514.5	22175.1	17386.5
F1M9B2	F1M9B2	F1M9B2_RAT	Igfbp7	Insulin-like growth factor binding protein 7	1	DACGCCPVCAR	DAC(UniMod:4)GC(UniMod:4)C(UniMod:4)PVC(UniMod:4)AR	2	DAC(UniMod:4)GC(UniMod:4)C(UniMod:4)PVC(UniMod:4)AR2	3020.47	1881.33	
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	DACLGIIK	DAC(UniMod:4)LGIIK	2	DAC(UniMod:4)LGIIK2	8519.65	8089.3	5164.24
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	DACLNAR	DAC(UniMod:4)LNAR	2	DAC(UniMod:4)LNAR2		579972	
Q62632	Q62632	FSTL1_RAT	Fstl1	Follistatin-related protein 1	1	DACLTGSK	DAC(UniMod:4)LTGSK	2	DAC(UniMod:4)LTGSK2	29387.1	32227.6	
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	DACLVANILDPR	DAC(UniMod:4)LVANILDPR	2	DAC(UniMod:4)LVANILDPR2	10442	15323.2	7134.39
Q66HG5	Q66HG5	TM9S2_RAT	Tm9sf2	Transmembrane 9 superfamily member 2	1	DACVISSEFHER	DAC(UniMod:4)VISSEFHER	2	DAC(UniMod:4)VISSEFHER2	28762.4	34128.4	24878.3
Q66HG5	Q66HG5	TM9S2_RAT	Tm9sf2	Transmembrane 9 superfamily member 2	1	DACVISSEFHER	DAC(UniMod:4)VISSEFHER	3	DAC(UniMod:4)VISSEFHER3	77592.5	80537.2	72068.7
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	DADDLEK	DADDLEK	2	DADDLEK2		346522	
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	DADDLQK	DADDLQK	1	DADDLQK1	10237.4	14760.3	3473.35
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	DADDLQK	DADDLQK	2	DADDLQK2	617810	696654	658695
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	DADDLQKR	DADDLQKR	1	DADDLQKR1			297974
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	DADDLQKR	DADDLQKR	2	DADDLQKR2	4.52129e+06		720814
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	DADECLLFGEEICK	DADEC(UniMod:4)LLFGEEIC(UniMod:4)K	2	DADEC(UniMod:4)LLFGEEIC(UniMod:4)K2	72207.8	74428.6	75207.1
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	DADECLLFGEEICK	DADEC(UniMod:4)LLFGEEIC(UniMod:4)K	3	DADEC(UniMod:4)LLFGEEIC(UniMod:4)K3	19628.1	15038.5	17358
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	DADFHVDK	DADFHVDK	1	DADFHVDK1	23029.6	17577.9	36292.7
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	DADFHVDK	DADFHVDK	2	DADFHVDK2	1.36856e+06	1.35077e+06	1.23068e+06
Q62656	Q62656	PTPRZ_RAT	Ptprz1	Receptor-type tyrosine-protein phosphatase zeta	1	DADGVLEADDTGIAPGSPR	DADGVLEADDTGIAPGSPR	2	DADGVLEADDTGIAPGSPR2	4032.61		
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	DADIGVAEAER	DADIGVAEAER	2	DADIGVAEAER2	50574.2	54500.6	60975.2
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	DADLLKK	DADLLKK	2	DADLLKK2	65650.3	52879.3	61974.1
G3V762	G3V762	G3V762_RAT	Gfus	GDP-L-fucose synthase	1	DADLTDAAQTQALFQK	DADLTDAAQTQALFQK	2	DADLTDAAQTQALFQK2	6489.45	3113.98	4813.33
G3V762	G3V762	G3V762_RAT	Gfus	GDP-L-fucose synthase	1	DADLTDAAQTQALFQK	DADLTDAAQTQALFQK	3	DADLTDAAQTQALFQK3	1979.85	3559.29	2135.64
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	DADNDNCMCK	DADNDNC(UniMod:4)MC(UniMod:4)K	2	DADNDNC(UniMod:4)MC(UniMod:4)K2	36224.7		31792
P0C588	P0C588	CNNM4_RAT	Cnnm4	Metal transporter CNNM4	1	DADNELK	DADNELK	1	DADNELK1	5.36579e+06	27954.6	4.92973e+06
P0C588	P0C588	CNNM4_RAT	Cnnm4	Metal transporter CNNM4	1	DADNELK	DADNELK	2	DADNELK2	43314.2	722251	31926.9
Q5RKH0	Q5RKH0	GLYR1_RAT	Glyr1	Cytokine-like nuclear factor N-PAC	1	DADPHFHHFLLSQTEK	DADPHFHHFLLSQTEK	3	DADPHFHHFLLSQTEK3	4015.6	1175.77	695.731
Q5RKH0	Q5RKH0	GLYR1_RAT	Glyr1	Cytokine-like nuclear factor N-PAC	1	DADPHFHHFLLSQTEK	DADPHFHHFLLSQTEK	4	DADPHFHHFLLSQTEK4	4136.37	5918.31	
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	DADSIHQYLLQR	DADSIHQYLLQR	3	DADSIHQYLLQR3	33654.1	31070.7	35243.6
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	DADSITLFDVQQK	DADSITLFDVQQK	2	DADSITLFDVQQK2	140081	188587	169212
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	DADSITLFDVQQK	DADSITLFDVQQK	3	DADSITLFDVQQK3	7702.83	5351.72	8773.73
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	DADSQNPDAPEGK	DADSQNPDAPEGK	2	DADSQNPDAPEGK2	90649.9		18631.3
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	DADSQNPDAPEGKR	DADSQNPDAPEGKR	2	DADSQNPDAPEGKR2			2329.33
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	DADVSEESPPPLPER	DADVSEESPPPLPER	2	DADVSEESPPPLPER2	197849	226260	223123
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	DADVSEESPPPLPER	DADVSEESPPPLPER	3	DADVSEESPPPLPER3	25146	44650.2	45425.9
Q5U2Z4	Q5U2Z4	Q5U2Z4_RAT	Nfkb2	Nuclear factor kappa B subunit 2	1	DAEAGEAEEQPR	DAEAGEAEEQPR	2	DAEAGEAEEQPR2		2921.33	
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	DAEALVGQVLVKPYVSEVIVER	DAEALVGQVLVKPYVSEVIVER	3	DAEALVGQVLVKPYVSEVIVER3	25118.4	15644.1	26961.8
P58405	P58405	STRN3_RAT	Strn3	Striatin-3	1	DAEAPPAQNSQLTWK	DAEAPPAQNSQLTWK	2	DAEAPPAQNSQLTWK2	92407.3	65728	78774.7
P58405	P58405	STRN3_RAT	Strn3	Striatin-3	1	DAEAPPAQNSQLTWK	DAEAPPAQNSQLTWK	3	DAEAPPAQNSQLTWK3		7320.64	6955.79
Q6IFW6	Q6IFW6	K1C10_RAT	Krt10	Keratin, type I cytoskeletal 10	1	DAEAWFNEK	DAEAWFNEK	2	DAEAWFNEK2	76856	64635.4	51506.6
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	DAEDGNANFLGK	DAEDGNANFLGK	2	DAEDGNANFLGK2	108226	104078	106638
Q5HZV9	Q5HZV9	PP1R7_RAT	Ppp1r7	Protein phosphatase 1 regulatory subunit 7	1	DAEDVDLNHYR	DAEDVDLNHYR	3	DAEDVDLNHYR3	2740.67		
Q6IFU8	Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	1	DAEDWFFSK	DAEDWFFSK	2	DAEDWFFSK2	22759.9	10583.4	15521.6
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	DAEEAATGECTATLEK	DAEEAATGEC(UniMod:4)TATLEK	2	DAEEAATGEC(UniMod:4)TATLEK2	6830.26	4.09443e+06	3.96619e+06
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	DAEEAATGECTATLEK	DAEEAATGEC(UniMod:4)TATLEK	3	DAEEAATGEC(UniMod:4)TATLEK3	701182	729521	776976
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	DAEEAATGECTATLEKR	DAEEAATGEC(UniMod:4)TATLEKR	2	DAEEAATGEC(UniMod:4)TATLEKR2	2457.19		
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	DAEEAATGECTATLEKR	DAEEAATGEC(UniMod:4)TATLEKR	3	DAEEAATGEC(UniMod:4)TATLEKR3	63008.3	66184.7	56444.8
P01048	P08932;A0A0G2KA54;P01048	KNT1_RAT	Map1	T-kininogen 1	0	DAEEAATGECTTTLGK	DAEEAATGEC(UniMod:4)TTTLGK	2	DAEEAATGEC(UniMod:4)TTTLGK2	434170	411091	341396
P01048	P08932;A0A0G2KA54;P01048	KNT1_RAT	Map1	T-kininogen 1	0	DAEEAATGECTTTLGK	DAEEAATGEC(UniMod:4)TTTLGK	3	DAEEAATGEC(UniMod:4)TTTLGK3	17624.8	14884	12082.1
P01048	P08932;A0A0G2KA54;P01048	KNT1_RAT	Map1	T-kininogen 1	0	DAEEAATGECTTTLGKK	DAEEAATGEC(UniMod:4)TTTLGKK	3	DAEEAATGEC(UniMod:4)TTTLGKK3	5299.09	5871.08	
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DAEELEK	DAEELEK	1	DAEELEK1	13056.5	14449.8	13166.6
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DAEELEK	DAEELEK	2	DAEELEK2	627105	770858	879598
Q6IFU7	Q6IFU7	K1C42_RAT	Krt42	Keratin, type I cytoskeletal 42	1	DAEEWFFTK	DAEEWFFTK	2	DAEEWFFTK2	132434	113782	134148
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	DAEEWVQQLK	DAEEWVQQLK	2	DAEEWVQQLK2	1.68901e+06	1.61804e+06	1.72188e+06
A0A0G2JXI6	A0A0G2JXI6	A0A0G2JXI6_RAT	Cyrib	CYFIP related Rac1 interactor B	1	DAEGILEDLQSYR	DAEGILEDLQSYR	2	DAEGILEDLQSYR2	38419.4	30759.8	24491.1
Q64542	Q64542	AT2B4_RAT	Atp2b4	Plasma membrane calcium-transporting ATPase 4	1	DAEGLEEIDHAEMELR	DAEGLEEIDHAEMELR	3	DAEGLEEIDHAEMELR3	3574.7		
Q6IRJ7	Q6IRJ7	Q6IRJ7_RAT	Anxa7	Annexin	1	DAEILRK	DAEILRK	2	DAEILRK2	22930.6	19642.3	18919
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	DAEMPATEK	DAEMPATEK	2	DAEMPATEK2	4.84555e+06	5.02253e+06	5.81363e+06
Q9JIA3	Q9JIA3	IKBB_RAT	Nfkbib	NF-kappa-B inhibitor beta	1	DAEMVQLLR	DAEMVQLLR	2	DAEMVQLLR2	14068.4	15986.5	15578.9
Q63525	Q63525	NUDC_RAT	Nudc	Nuclear migration protein nudC	1	DAENHEVQLK	DAENHEVQLK	2	DAENHEVQLK2	1523.04		1453.65
Q63525	Q63525	NUDC_RAT	Nudc	Nuclear migration protein nudC	1	DAENHEVQLK	DAENHEVQLK	3	DAENHEVQLK3	8158.8	5281.55	15397.9
B5DFL6	B5DFL6	B5DFL6_RAT	Cmtm3	CKLF-like MARVEL transmembrane domain containing 3	1	DAEPEPDPESTHGPR	DAEPEPDPESTHGPR	2	DAEPEPDPESTHGPR2	33404.5	31009	43685.3
B5DFL6	B5DFL6	B5DFL6_RAT	Cmtm3	CKLF-like MARVEL transmembrane domain containing 3	1	DAEPEPDPESTHGPR	DAEPEPDPESTHGPR	3	DAEPEPDPESTHGPR3	354028	364769	401886
Q6P6S5	Q6P6S5	GET1_RAT	Get1	Guided entry of tail-anchored proteins factor 1	1	DAEQESQMR	DAEQESQMR	2	DAEQESQMR2	13800	11669.6	3145.15
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	DAEQVAELK	DAEQVAELK	2	DAEQVAELK2	305454	345446	347838
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	DAEQVAELKQELSALK	DAEQVAELKQELSALK	3	DAEQVAELKQELSALK3	4773.54	4546.02	4729.86
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	DAERDQWYLVGVVSWGEDCGK	DAERDQWYLVGVVSWGEDC(UniMod:4)GK	3	DAERDQWYLVGVVSWGEDC(UniMod:4)GK3	423009	459372	441299
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	DAERDQWYLVGVVSWGEDCGK	DAERDQWYLVGVVSWGEDC(UniMod:4)GK	4	DAERDQWYLVGVVSWGEDC(UniMod:4)GK4		3744.76	
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	DAERDQWYLVGVVSWGEDCGKK	DAERDQWYLVGVVSWGEDC(UniMod:4)GKK	3	DAERDQWYLVGVVSWGEDC(UniMod:4)GKK3	5906.4	10173.9	3528.35
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	DAERDQWYLVGVVSWGEDCGKK	DAERDQWYLVGVVSWGEDC(UniMod:4)GKK	4	DAERDQWYLVGVVSWGEDC(UniMod:4)GKK4	37574.7	29471.5	35876.7
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	DAESPSWR	DAESPSWR	2	DAESPSWR2	97204	131207	120104
O35394	O35394	PRAF1_RAT	Rabac1	Prenylated Rab acceptor protein 1	1	DAEVEGLSATTLLPK	DAEVEGLSATTLLPK	2	DAEVEGLSATTLLPK2	4000.85	6355	2651.39
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	DAEVIVDWRPLDDALDSSSILYAGK	DAEVIVDWRPLDDALDSSSILYAGK	3	DAEVIVDWRPLDDALDSSSILYAGK3	8531.89	14871.1	17771.8
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	DAEVVLCGGTESMSQSPYSVR	DAEVVLC(UniMod:4)GGTESMSQSPYSVR	3	DAEVVLC(UniMod:4)GGTESMSQSPYSVR3	21695.6	21304.7	16381.4
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	DAFALAK	DAFALAK	1	DAFALAK1	3217.9	5267.36	4333.58
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	DAFDAGERPSFDRDTDVHTVASLLK	DAFDAGERPSFDRDTDVHTVASLLK	4	DAFDAGERPSFDRDTDVHTVASLLK4	23472.2	8024.63	31015.8
A0A0G2KB09	A0A0G2KB09;Q9HB97	A0A0G2KB09_RAT	Parvb	Parvin, beta	0	DAFDTLFDHAPDK	DAFDTLFDHAPDK	2	DAFDTLFDHAPDK2	52918.8	39536.6	40668.9
A0A0G2KB09	A0A0G2KB09;Q9HB97	A0A0G2KB09_RAT	Parvb	Parvin, beta	0	DAFDTLFDHAPDK	DAFDTLFDHAPDK	3	DAFDTLFDHAPDK3	494250	434792	508552
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	DAFDTLFDHAPDKLNLVK	DAFDTLFDHAPDKLNLVK	3	DAFDTLFDHAPDKLNLVK3	6901.27	3178.51	7142.36
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	DAFDTLFDHAPDKLNLVK	DAFDTLFDHAPDKLNLVK	4	DAFDTLFDHAPDKLNLVK4	15960.7	14771.7	12618.3
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	DAFERGEDPLVEGCTAHDLDSVAGVLK	DAFERGEDPLVEGC(UniMod:4)TAHDLDSVAGVLK	4	DAFERGEDPLVEGC(UniMod:4)TAHDLDSVAGVLK4	18571.6	16208.2	13507.1
A0A8I5ZNG4	A0A8I5ZNG4	A0A8I5ZNG4_RAT	Rictor	RPTOR independent companion of MTOR, complex 2	1	DAFGYATLK	DAFGYATLK	2	DAFGYATLK2	7857.02	7047.93	5538
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	DAFITAICK	DAFITAIC(UniMod:4)K	2	DAFITAIC(UniMod:4)K2	22588.7	29438.5	25885.7
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	DAFLQQK	DAFLQQK	2	DAFLQQK2	47253.2	49890	34511.5
Q7TSU1	D4A631;Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	0	DAFLVFR	DAFLVFR	2	DAFLVFR2	49615.9	52366.6	44306.3
Q4KMA2	Q4KMA2;F7FJT3	RD23B_RAT	Rad23b	UV excision repair protein RAD23 homolog B	0	DAFPVAGQK	DAFPVAGQK	2	DAFPVAGQK2	161040	141939	156736
Q5RJR2	Q5RJR2;A0A8I6GGS8	TWF1_RAT	Twf1	Twinfilin-1	0	DAFQALEK	DAFQALEK	2	DAFQALEK2	275823	203271	257798
Q924S1	Q924S1	PLCD_RAT	Agpat4	1-acyl-sn-glycerol-3-phosphate acyltransferase delta	1	DAFQEEYYR	DAFQEEYYR	2	DAFQEEYYR2	14274.3	14526	19134.7
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	DAFQNAYLELGGLGER	DAFQNAYLELGGLGER	2	DAFQNAYLELGGLGER2	63488.2	44916.3	32664.3
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	DAFQNAYLELGGLGER	DAFQNAYLELGGLGER	3	DAFQNAYLELGGLGER3	23247.8	25286.5	18844.2
Q9EPB1	Q9EPB1	DPP2_RAT	Dpp7	Dipeptidyl peptidase 2	1	DAFQQIK	DAFQQIK	2	DAFQQIK2	30748.4	42996.9	37630.5
A0A8I6ATU9	A0A8I6ATU9	A0A8I6ATU9_RAT	Atxn2	Ataxin 2	1	DAFTDSALSAK	DAFTDSALSAK	2	DAFTDSALSAK2	3332.01	5669.8	6988.49
P48037	P48037	ANXA6_RAT	Anxa6	Annexin A6	1	DAFVAIVQSVK	DAFVAIVQSVK	2	DAFVAIVQSVK2	6302	2725.2	5112.05
Q9ET64	Q9ET64	NSMA_RAT	Smpd2	Sphingomyelin phosphodiesterase 2	1	DAFVETEDFK	DAFVETEDFK	2	DAFVETEDFK2	40272.5	45003.3	47456
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	DAFVILVENALR	DAFVILVENALR	2	DAFVILVENALR2	7328.73	4836.21	5171.77
A0A8I6A822	A0A8I6A822	A0A8I6A822_RAT	Tm9sf3	Transmembrane 9 superfamily member	1	DAFVYAIK	DAFVYAIK	2	DAFVYAIK2	198159	163615	167000
Q9JIA3	Q9JIA3	IKBB_RAT	Nfkbib	NF-kappa-B inhibitor beta	1	DAGADLNKPEPTCGR	DAGADLNKPEPTC(UniMod:4)GR	3	DAGADLNKPEPTC(UniMod:4)GR3	24235.1	23657.6	34509.6
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	DAGAPTYMYEFQYR	DAGAPTYMYEFQYR	2	DAGAPTYMYEFQYR2	35057.3	39444.6	38668.2
A0A8I5ZU29	A0A8I5ZU29;A0A8I6A7J6;A0A8L2UM24;B4F777	A0A8I5ZU29_RAT	LOC120097335	High mobility group nucleosome-binding domain-containing protein 5-like	0	DAGATTIPETKPEVVK	DAGATTIPETKPEVVK	3	DAGATTIPETKPEVVK3	30735.5	33496.5	26239.6
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	DAGEGGLSLAIEGPSK	DAGEGGLSLAIEGPSK	2	DAGEGGLSLAIEGPSK2	610991	556973	525516
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	DAGEGGLSLAIEGPSK	DAGEGGLSLAIEGPSK	3	DAGEGGLSLAIEGPSK3	31280.3	24242.3	34275.5
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	DAGEGLLAVQITDPEGK	DAGEGLLAVQITDPEGK	2	DAGEGLLAVQITDPEGK2	219129	203189	207195
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	DAGEGLLAVQITDPEGK	DAGEGLLAVQITDPEGK	3	DAGEGLLAVQITDPEGK3	10548.1	15194.1	21156.4
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	DAGEGLLAVQITDPEGKPK	DAGEGLLAVQITDPEGKPK	2	DAGEGLLAVQITDPEGKPK2	559836	534651	550210
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	DAGEGLLAVQITDPEGKPK	DAGEGLLAVQITDPEGKPK	3	DAGEGLLAVQITDPEGKPK3	2.94445e+06	2.91798e+06	3.01813e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	DAGEGLLAVQITDPEGKPKK	DAGEGLLAVQITDPEGKPKK	3	DAGEGLLAVQITDPEGKPKK3	42114.9	52662.9	46597.5
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	DAGEGLLAVQITDPEGKPKK	DAGEGLLAVQITDPEGKPKK	4	DAGEGLLAVQITDPEGKPKK4	41919.3	46463.1	70673.3
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	DAGEKDKEQELSEEDK	DAGEKDKEQELSEEDK	3	DAGEKDKEQELSEEDK3	14732.8	22492.9	11583
A0A8I6AA52	A0A8I6AA52	A0A8I6AA52_RAT	Wdr48	WD repeat-containing protein 48	1	DAGFSSPDGSDPK	DAGFSSPDGSDPK	2	DAGFSSPDGSDPK2	8874.8	10552.3	9231.2
D3ZMA2	D3ZMA2	D3ZMA2_RAT	Mtmr14	Myotubularin related protein 14	1	DAGFTVEDICMLR	DAGFTVEDIC(UniMod:4)MLR	2	DAGFTVEDIC(UniMod:4)MLR2	18824.2	13001.1	16772.3
P51635	P51635	AK1A1_RAT	Akr1a1	Aldo-keto reductase family 1 member A1	1	DAGHPLYPFNDPY	DAGHPLYPFNDPY	2	DAGHPLYPFNDPY2	15476.3	13026.3	17231.5
D3ZHR2	D3ZHR2	ABCD1_RAT	Abcd1	ATP-binding cassette sub-family D member 1	1	DAGISLLSITHRPSLWK	DAGISLLSITHRPSLWK	3	DAGISLLSITHRPSLWK3	24055.4	20921.8	24321.7
P0C5E3	P0C5E3	PALLD_RAT	Palld	Palladin (Fragment)	1	DAGIYTCIATNR	DAGIYTC(UniMod:4)IATNR	2	DAGIYTC(UniMod:4)IATNR2	4199.27	6639.99	7455.32
Q5BK57	Q5BK57	HAUS8_RAT	Haus8	HAUS augmin-like complex subunit 8	1	DAGKPAASGAGAVPK	DAGKPAASGAGAVPK	3	DAGKPAASGAGAVPK3	22336.9	21441.1	13275.9
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	DAGLDFVK	DAGLDFVK	2	DAGLDFVK2	8284.76	6586.34	
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	DAGLYTCK	DAGLYTC(UniMod:4)K	2	DAGLYTC(UniMod:4)K2	16436.4	15413	20376.8
Q9QZ81	Q9QZ81;F1LUS2;F1LUQ5;A0A8I5ZP12	AGO2_RAT	Ago2	Protein argonaute-2	0	DAGMPIQGQPCFCK	DAGMPIQGQPC(UniMod:4)FC(UniMod:4)K	2	DAGMPIQGQPC(UniMod:4)FC(UniMod:4)K2	7408.18	7945.4	6741.9
P00507	A0A8I6GJD2;P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	0	DAGMQLQGYR	DAGMQLQGYR	2	DAGMQLQGYR2	77541.2	99535	94007.1
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	DAGNAPLK	DAGNAPLK	2	DAGNAPLK2	15043.5	19368.2	
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	DAGPLLISLK	DAGPLLISLK	2	DAGPLLISLK2	942119	778337	712278
Q561Q9	Q561Q9	Q561Q9_RAT	Ctsw	Cathepsin W	1	DAGPRPLELK	DAGPRPLELK	2	DAGPRPLELK2	19775.3	15379.3	16291
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	DAGQISGLNVLR	DAGQISGLNVLR	2	DAGQISGLNVLR2	217973	214152	247643
Q80Z30	Q80Z30	PPM1E_RAT	Ppm1e	Protein phosphatase 1E	1	DAGSSDNITVIVVFLR	DAGSSDNITVIVVFLR	2	DAGSSDNITVIVVFLR2	5252.05	3700.98	
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	DAGTIAGLNVLR	DAGTIAGLNVLR	2	DAGTIAGLNVLR2	1.57587e+06	1.6126e+06	1.81114e+06
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	DAGTIAGLNVLR	DAGTIAGLNVLR	3	DAGTIAGLNVLR3	27195.7	34640.7	25709.5
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	DAGTIAGLNVMR	DAGTIAGLNVMR	2	DAGTIAGLNVMR2	3.69709e+06	3.80075e+06	3.83926e+06
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	DAGTIAGLNVMR	DAGTIAGLNVMR	3	DAGTIAGLNVMR3	19372.8	22924.2	46148.3
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	DAGTITGLNVLR	DAGTITGLNVLR	2	DAGTITGLNVLR2	166673	159746	186530
P0DMW0;P0DMW1	P0DMW0;P0DMW1;P55063	HS71A_RAT;HS71B_RAT	Hspa1a;Hspa1b	Heat shock 70 kDa protein 1A	0	DAGVIAGLNVLR	DAGVIAGLNVLR	2	DAGVIAGLNVLR2	11574.2	4162.72	6224.4
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	DAGVVCSNDSR	DAGVVC(UniMod:4)SNDSR	2	DAGVVC(UniMod:4)SNDSR2	50086	34918.3	56325.4
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	DAGYGGLSLSIEGPSK	DAGYGGLSLSIEGPSK	2	DAGYGGLSLSIEGPSK2	290425	276733	246586
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	DAGYTNATTTDQHGLAK	DAGYTNATTTDQHGLAK	2	DAGYTNATTTDQHGLAK2	924.13		
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	DAGYTNATTTDQHGLAK	DAGYTNATTTDQHGLAK	3	DAGYTNATTTDQHGLAK3	4403.5	1173.1	29728.9
F1LW90	F1LW90	F1LW90_RAT	Fam184a	Family with sequence similarity 184, member A	1	DAHEEEIQQILAETR	DAHEEEIQQILAETR	3	DAHEEEIQQILAETR3	15867		
A0A8I6AWZ3	A0A8I6AWZ3	A0A8I6AWZ3_RAT	Agap1	ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	1	DAHGNTALAYAR	DAHGNTALAYAR	3	DAHGNTALAYAR3	7540.05		7980.75
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	DAHNALLDIQSSGR	DAHNALLDIQSSGR	2	DAHNALLDIQSSGR2	10412.5	13566.1	13595.6
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	DAHNALLDIQSSGR	DAHNALLDIQSSGR	3	DAHNALLDIQSSGR3	142354	157275	180952
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	DAHPLLPVTNR	DAHPLLPVTNR	2	DAHPLLPVTNR2	8562.37	13009.1	14945.6
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	DAHPLLPVTNR	DAHPLLPVTNR	3	DAHPLLPVTNR3	30318.3	29940.5	24011
Q5RK08	Q5RK08	Q5RK08_RAT	Nipsnap2	Glioblastoma amplified sequence	1	DAHSNLLAK	DAHSNLLAK	2	DAHSNLLAK2	19657.3	15703.4	7742.93
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	DAHSQGEVVSCLEK	DAHSQGEVVSC(UniMod:4)LEK	2	DAHSQGEVVSC(UniMod:4)LEK2	1579.94	3085.13	7102.82
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	DAHSQGEVVSCLEK	DAHSQGEVVSC(UniMod:4)LEK	3	DAHSQGEVVSC(UniMod:4)LEK3	38820.9	51192.8	40729.3
A0A0G2JUU7	A0A0G2JUU7	A0A0G2JUU7_RAT	Tubgcp3	Gamma-tubulin complex component	1	DAHSTPYYCAR	DAHSTPYYC(UniMod:4)AR	3	DAHSTPYYC(UniMod:4)AR3	4106.59	7078.56	6413.72
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	DAHTYSIGVCTTAADLDQEGCK	DAHTYSIGVC(UniMod:4)TTAADLDQEGC(UniMod:4)K	3	DAHTYSIGVC(UniMod:4)TTAADLDQEGC(UniMod:4)K3	5465.63	3133.76	4888.45
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	DAIAALGLLQK	DAIAALGLLQK	2	DAIAALGLLQK2	123610	134678	
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	DAIAGRPPADK	DAIAGRPPADK	2	DAIAGRPPADK2	33196.6	23381.9	28227.7
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	DAIAGRPPADKK	DAIAGRPPADKK	2	DAIAGRPPADKK2	1811.25		
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	DAIAGRPPADKK	DAIAGRPPADKK	3	DAIAGRPPADKK3			44890.2
D3ZIT4	D3ZIT4	D3ZIT4_RAT	Anapc7	Anaphase promoting complex subunit 7	1	DAIAILDGIPSR	DAIAILDGIPSR	2	DAIAILDGIPSR2	10032.8	9769.26	9205.84
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	DAIDREVEAVDSEYQLAR	DAIDREVEAVDSEYQLAR	3	DAIDREVEAVDSEYQLAR3	11860.5	14248.1	8025.09
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	DAIDREVEAVDSEYQLARPSDANR	DAIDREVEAVDSEYQLARPSDANR	4	DAIDREVEAVDSEYQLARPSDANR4	2612.72	4968.29	1783.66
Q6AY17	Q6AY17	AB17B_RAT	Abhd17b	Alpha/beta hydrolase domain-containing protein 17B	1	DAIECFMTR	DAIEC(UniMod:4)FMTR	2	DAIEC(UniMod:4)FMTR2	33416.7	27107	21888.2
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	DAIHFYNK	DAIHFYNK	2	DAIHFYNK2	10571.1	5806.24	8837.37
P62332	P62332	ARF6_RAT	Arf6	ADP-ribosylation factor 6	1	DAIILIFANK	DAIILIFANK	2	DAIILIFANK2	63247.1	52908.6	62997.8
G3V8L1	G3V8L1	G3V8L1_RAT	Pycard	PYD and CARD domain containing	1	DAILDALENLTADEFKK	DAILDALENLTADEFKK	3	DAILDALENLTADEFKK3	6044.5	2288.18	9511.3
P02661	P02661	CASA1_RAT	Csn1s1	Alpha-S1-casein	1	DAIPSATEQK	DAIPSATEQK	2	DAIPSATEQK2	17212.3	27347.1	21376
B0BN65	B0BN65	B0BN65_RAT	Cyria	CYFIP related Rac1 interactor A	1	DAIQNPNDIQLQEK	DAIQNPNDIQLQEK	2	DAIQNPNDIQLQEK2	39259.3	46382.6	25914.4
Q68FW4	Q68FW4	STX18_RAT	Stx18	Syntaxin-18	1	DAIQQLR	DAIQQLR	2	DAIQQLR2	15400.6	7716.31	19283.6
D3ZHK4	D3ZHK4	D3ZHK4_RAT	Rb1cc1	RB1-inducible coiled-coil 1	1	DAIVCMQHEK	DAIVC(UniMod:4)MQHEK	3	DAIVC(UniMod:4)MQHEK3	3159.25	4499.18	5145.19
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	DAIVESIEYR	DAIVESIEYR	2	DAIVESIEYR2	159091	181847	177764
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	DAIVNCLDEDR	DAIVNC(UniMod:4)LDEDR	2	DAIVNC(UniMod:4)LDEDR2	20664.6	17093.3	16774.6
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	DAIVQAVK	DAIVQAVK	2	DAIVQAVK2	22503.3	25742.1	25573.9
F7EUW3	F7EUW3	F7EUW3_RAT	C2cd2l	C2CD2-like	1	DAIVSTQPAMMVNLR	DAIVSTQPAMMVNLR	2	DAIVSTQPAMMVNLR2	49087.2	45712.1	49846.5
A0A8I6AGS4	A0A8I6AGS4	A0A8I6AGS4_RAT	Abi3bp	ABI family member 3 binding protein	1	DAIWTERPFNSDSYSECK	DAIWTERPFNSDSYSEC(UniMod:4)K	3	DAIWTERPFNSDSYSEC(UniMod:4)K3	32517.7	27731.6	24627.6
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	DAIYSDSSSLVSDLK	DAIYSDSSSLVSDLK	2	DAIYSDSSSLVSDLK2	11919.3	10963.7	10435.3
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	DALAKTVYSHLFDHVVDR	DALAKTVYSHLFDHVVDR	3	DALAKTVYSHLFDHVVDR3	2394.25		
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	DALCLINSIPLPQK	DALC(UniMod:4)LINSIPLPQK	2	DALC(UniMod:4)LINSIPLPQK2	18443.7	16727.1	15842.3
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	DALDQAQQVER	DALDQAQQVER	2	DALDQAQQVER2	144998	134495	150970
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	DALDSEK	DALDSEK	1	DALDSEK1	5795.48	4470.2	
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	DALDSEK	DALDSEK	2	DALDSEK2		133149	
P36972	P36972	APT_RAT	Aprt	Adenine phosphoribosyltransferase	1	DALEPGQK	DALEPGQK	2	DALEPGQK2	25954.9	32274.9	27448.7
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	DALESAMK	DALESAMK	2	DALESAMK2	29575.4	24727.4	38531.1
A0A8I6AE36	A0A8I6AE36;Q9QYU1	A0A8I6AE36_RAT	ENSRNOG00000067472	Peroxisomal biogenesis factor 19	0	DALFASQEK	DALFASQEK	2	DALFASQEK2	28023.2	42935.6	27214.3
P12928	P12928	KPYR_RAT	Pklr	Pyruvate kinase PKLR	1	DALGPEGQNIK	DALGPEGQNIK	2	DALGPEGQNIK2	11272	5915.01	7175.9
A0A8I6G3S1	A0A8I6G3S1	A0A8I6G3S1_RAT	Mon1b	Vacuolar fusion protein MON1 homolog	1	DALGTLLR	DALGTLLR	2	DALGTLLR2	8857.09	12205.5	10361.6
A0A8I6A9E8	A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	1	DALIDELELELDQK	DALIDELELELDQK	2	DALIDELELELDQK2	9144.69		6205.79
A0A8I6A9E8	A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	1	DALIDELELELDQK	DALIDELELELDQK	3	DALIDELELELDQK3		990.639	1501.84
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	DALIQFQEER	DALIQFQEER	2	DALIQFQEER2	27274.4	25739.4	29294.1
Q66H59	Q66H59	NPL_RAT	Npl	N-acetylneuraminate lyase	1	DALISFLR	DALISFLR	2	DALISFLR2	115255	117348	108059
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	DALLAELSTTK	DALLAELSTTK	2	DALLAELSTTK2	74268.4	74167.2	72794.4
O08816	O08816	WASL_RAT	Wasl	Actin nucleation-promoting factor WASL	1	DALLDQIR	DALLDQIR	2	DALLDQIR2	1104.16		2947.92
D3ZZL9	D3ZZL9	GCC2_RAT	Gcc2	GRIP and coiled-coil domain-containing protein 2	1	DALLETINR	DALLETINR	2	DALLETINR2	10150.8	8651.24	15228
G3V6S0	A0A0G2K677;Q9QWN8;G3V6S0;A0A8I6AWM3	G3V6S0_RAT	Sptbn1	Spectrin beta chain	0	DALLLWCQMK	DALLLWC(UniMod:4)QMK	2	DALLLWC(UniMod:4)QMK2	411282	446522	363060
Q9Z1L0	A0A8I5Y949;Q9Z1L0	PK3CB_RAT	Pik3cb	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform	0	DALLNWLK	DALLNWLK	2	DALLNWLK2	6918.6	4474.81	2615.56
A0A8I5ZQQ3	A0A8I5ZQQ3	A0A8I5ZQQ3_RAT	Pdpr	Pyruvate dehydrogenase phosphatase regulatory subunit	1	DALLQQK	DALLQQK	1	DALLQQK1	5498.8	7314.76	
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	DALLSALSIQNYHLECNETK	DALLSALSIQNYHLEC(UniMod:4)NETK	3	DALLSALSIQNYHLEC(UniMod:4)NETK3	339086	340235	358605
A0A8I6GH80	A0A8I6GH80	A0A8I6GH80_RAT	Vps4b	vesicle-fusing ATPase	1	DALMQPVR	DALMQPVR	2	DALMQPVR2	7925.81	9872.1	6324.55
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	DALNENSQLQESQK	DALNENSQLQESQK	2	DALNENSQLQESQK2	1462.02	3010.03	2226.39
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	DALNQATSQVESK	DALNQATSQVESK	2	DALNQATSQVESK2	55428.7	49272.7	53339.8
B2RYI2	B2RYI2	B2RYI2_RAT	Srp68	Signal recognition particle subunit SRP68	1	DALQAVR	DALQAVR	2	DALQAVR2	10222.4	4276.63	12585
Q5XIU9	Q5XIU9	PGRC2_RAT	Pgrmc2	Membrane-associated progesterone receptor component 2	1	DALRDEYDDLSDLNAVQMESVR	DALRDEYDDLSDLNAVQMESVR	3	DALRDEYDDLSDLNAVQMESVR3	14610.2	19167.6	13447.1
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	DALSALAR	DALSALAR	2	DALSALAR2	301660	401028	305119
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	DALSDLALHFLNK	DALSDLALHFLNK	2	DALSDLALHFLNK2	43467.4	31829.8	25572.7
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	DALSDLALHFLNK	DALSDLALHFLNK	3	DALSDLALHFLNK3	153912	205097	238934
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	DALVDFSEQYGPETDPYFIQDR	DALVDFSEQYGPETDPYFIQDR	3	DALVDFSEQYGPETDPYFIQDR3	13271.2	16315.6	13791.8
Q5M7T1	Q5M7T1	CIAO1_RAT	Ciao1	Probable cytosolic iron-sulfur protein assembly protein CIAO1	1	DALVLQSR	DALVLQSR	2	DALVLQSR2	227909	216271	234758
D3ZW15	D3ZW15	D3ZW15_RAT	Sec24b	SEC24 homolog B, COPII coat complex component	1	DALVNAVVDPLSAYSSAVSSVPR	DALVNAVVDPLSAYSSAVSSVPR	3	DALVNAVVDPLSAYSSAVSSVPR3	16633.1	13155	5956.35
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	DALVSQPTK	DALVSQPTK	2	DALVSQPTK2	47577.4	57622.9	56357.1
Q9QWG5	Q9QWG5	INP4B_RAT	Inpp4b	Type II inositol 3,4-bisphosphate 4-phosphatase	1	DALYDVITVGAPAAHFQGFK	DALYDVITVGAPAAHFQGFK	3	DALYDVITVGAPAAHFQGFK3	14416.2	11762.5	7487.09
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	DAMENEMR	DAMENEMR	2	DAMENEMR2	79040.6	83681	82298.5
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	DAMLENQTPELFQDVNKPK	DAMLENQTPELFQDVNKPK	3	DAMLENQTPELFQDVNKPK3	37074.6	45731.2	38008
P04762	P04762	CATA_RAT	Cat	Catalase	1	DAMLFPSFIHSQK	DAMLFPSFIHSQK	2	DAMLFPSFIHSQK2	13895.7	14536.6	21409.1
P04762	P04762	CATA_RAT	Cat	Catalase	1	DAMLFPSFIHSQK	DAMLFPSFIHSQK	3	DAMLFPSFIHSQK3	22056.3	20860.6	26436.5
P63329	P63329	PP2BA_RAT	Ppp3ca	Protein phosphatase 3 catalytic subunit alpha	1	DAMPSDANLNSINK	DAMPSDANLNSINK	2	DAMPSDANLNSINK2	213019	203129	188863
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	DAMQYASESK	DAMQYASESK	2	DAMQYASESK2	1.2325e+06	1.27924e+06	1.30023e+06
P37136	P37136	ACES_RAT	Ache	Acetylcholinesterase	1	DAMSAVVGDHNVVCPVAQLAGR	DAMSAVVGDHNVVC(UniMod:4)PVAQLAGR	3	DAMSAVVGDHNVVC(UniMod:4)PVAQLAGR3	75953.4	64128.7	74269.2
Q29RW1	Q29RW1	MYH4_RAT	Myh4	Myosin-4	1	DAMVSQLSR	DAMVSQLSR	2	DAMVSQLSR2	9169.58	7463.06	10273.4
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	DANDNSPVLESNPYEAFIVENLPAGSR	DANDNSPVLESNPYEAFIVENLPAGSR	3	DANDNSPVLESNPYEAFIVENLPAGSR3		2549.58	1043.81
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	DANEESSCQDPDVGDGEEEER	DANEESSC(UniMod:4)QDPDVGDGEEEER	3	DANEESSC(UniMod:4)QDPDVGDGEEEER3	30598.4	28089.7	22199.5
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	DANEESSCQDPDVGDGEEEERVQATDKK	DANEESSC(UniMod:4)QDPDVGDGEEEERVQATDKK	4	DANEESSC(UniMod:4)QDPDVGDGEEEERVQATDKK4	7131.73	16501.6	16549.9
E9PU64	E9PU64	E9PU64_RAT	Scin	Scinderin	1	DANEVEKK	DANEVEKK	2	DANEVEKK2			228797
P62703	P62703	RS4X_RAT	Rps4x	Small ribosomal subunit protein eS4	1	DANGNSFATR	DANGNSFATR	2	DANGNSFATR2	11965.3	7005.95	11552.2
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	DANGRPDAVVAK	DANGRPDAVVAK	3	DANGRPDAVVAK3	32752.1	37036.5	32335.8
B5DF91	B5DF91	ELAV1_RAT	Elavl1	ELAV-like protein 1	1	DANLYISGLPR	DANLYISGLPR	2	DANLYISGLPR2	27492.2	19076.4	22380.6
Q9WTT7	Q9WTT7	5MP1_RAT	Bzw2	eIF5-mimic protein 1	1	DANSVTSSLR	DANSVTSSLR	2	DANSVTSSLR2	42990	53445.4	34575.5
O35314	O35314	SCG1_RAT	Chgb	Secretogranin-1	1	DANVATANLGEK	DANVATANLGEK	2	DANVATANLGEK2	39290.1	46026	43438.5
Q8CIZ5	Q8CIZ5	DMBT1_RAT	Dmbt1	Deleted in malignant brain tumors 1 protein	1	DANVVCR	DANVVC(UniMod:4)R	2	DANVVC(UniMod:4)R2	425854	533137	511685
Q5RKH6	Q5RKH6	OS9_RAT	Os9	Protein OS-9	1	DAPCLLK	DAPC(UniMod:4)LLK	2	DAPC(UniMod:4)LLK2	27009.6	23789.9	14061.9
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	DAPEEEAMESSVR	DAPEEEAMESSVR	2	DAPEEEAMESSVR2	238835	220957	293081
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	DAPEEEAMESSVR	DAPEEEAMESSVR	3	DAPEEEAMESSVR3	9335.49	11254	11297.3
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	DAPEEEAMESSVREDENK	DAPEEEAMESSVREDENK	3	DAPEEEAMESSVREDENK3	139079	110697	117084
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	DAPEGGFDAIMQATVCDEK	DAPEGGFDAIMQATVC(UniMod:4)DEK	3	DAPEGGFDAIMQATVC(UniMod:4)DEK3	194042	157290	210118
Q9ES54	Q9ES54	NPL4_RAT	Nploc4	Nuclear protein localization protein 4 homolog	1	DAPELGYAK	DAPELGYAK	2	DAPELGYAK2	60383.1	41777.5	41245.3
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	DAPHVETDFSSQK	DAPHVETDFSSQK	2	DAPHVETDFSSQK2	27785.8	39427.1	22523.6
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	DAPHVETDFSSQK	DAPHVETDFSSQK	3	DAPHVETDFSSQK3	346378	357492	382010
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	DAPITVFGCMQAR	DAPITVFGC(UniMod:4)MQAR	2	DAPITVFGC(UniMod:4)MQAR2	364695	392004	387463
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	DAPITVFGCMQAR	DAPITVFGC(UniMod:4)MQAR	3	DAPITVFGC(UniMod:4)MQAR3	13426.5	15080.3	15645.2
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	DAPIVNR	DAPIVNR	1	DAPIVNR1	113710	129433	121166
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	DAPIVNR	DAPIVNR	2	DAPIVNR2	1.05202e+08	1.3512e+08	1.23503e+08
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	DAPLSPPAQK	DAPLSPPAQK	2	DAPLSPPAQK2	31789.4	30192.2	30114.9
O08816	O08816	WASL_RAT	Wasl	Actin nucleation-promoting factor WASL	1	DAPNGPNLPMATVDIK	DAPNGPNLPMATVDIK	2	DAPNGPNLPMATVDIK2			3350.13
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	DAPSWDPIGLK	DAPSWDPIGLK	2	DAPSWDPIGLK2	47919	52802.2	80929.3
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	DAPVSTDSEMESGSK	DAPVSTDSEMESGSK	2	DAPVSTDSEMESGSK2	15887.7	14918.4	14547.9
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	DAPWTSNSSEK	DAPWTSNSSEK	2	DAPWTSNSSEK2	25613.6	14492.2	24252.8
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	DAPYDYK	DAPYDYK	2	DAPYDYK2	40171.7	38402.4	38191.3
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	DAQEQYNK	DAQEQYNK	2	DAQEQYNK2			33661.2
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	DAQGQPQMVPVSGDLSEVTVSGLEPSR	DAQGQPQMVPVSGDLSEVTVSGLEPSR	3	DAQGQPQMVPVSGDLSEVTVSGLEPSR3	37121.7	32352.3	32604.1
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	DAQGQPQMVPVSGDLSEVTVSGLEPSRK	DAQGQPQMVPVSGDLSEVTVSGLEPSRK	3	DAQGQPQMVPVSGDLSEVTVSGLEPSRK3	265959	305043	318400
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	DAQGQQMIFPYYGR	DAQGQQMIFPYYGR	2	DAQGQQMIFPYYGR2		5957.55	10654.4
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	DAQGQQMIFPYYGR	DAQGQQMIFPYYGR	3	DAQGQQMIFPYYGR3	102446	91177.1	92018.1
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	DAQGQQMIFPYYGREEELR	DAQGQQMIFPYYGREEELR	3	DAQGQQMIFPYYGREEELR3	12964.4	13204.1	11100.8
Q9Z0J5	Q9Z0J5	TRXR2_RAT	Txnrd2	Thioredoxin reductase 2, mitochondrial	1	DAQHYGWEVAQPVQHNWK	DAQHYGWEVAQPVQHNWK	3	DAQHYGWEVAQPVQHNWK3	6621.11	3380.28	6135.81
Q9Z0J5	Q9Z0J5	TRXR2_RAT	Txnrd2	Thioredoxin reductase 2, mitochondrial	1	DAQHYGWEVAQPVQHNWK	DAQHYGWEVAQPVQHNWK	4	DAQHYGWEVAQPVQHNWK4	15807.4	12845.5	11790.9
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	DAQIGWIQIVEDLHER	DAQIGWIQIVEDLHER	2	DAQIGWIQIVEDLHER2	8682.02	3855.14	1168.49
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	DAQIGWIQIVEDLHER	DAQIGWIQIVEDLHER	3	DAQIGWIQIVEDLHER3	23854.9	17959	9098.94
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	DAQIGWIQIVEDLHERVPEK	DAQIGWIQIVEDLHERVPEK	4	DAQIGWIQIVEDLHERVPEK4		1294.95	5956.52
P04762	P04762	CATA_RAT	Cat	Catalase	1	DAQLFIQR	DAQLFIQR	2	DAQLFIQR2	38483	38678.9	42024
Q9JI03	Q9JI03	CO5A1_RAT	Col5a1	Collagen alpha-1(V) chain	1	DAQLSMPTK	DAQLSMPTK	2	DAQLSMPTK2	74649.7	104872	82427.2
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	DAQQSSSPAADNLR	DAQQSSSPAADNLR	2	DAQQSSSPAADNLR2	25111.7	26262.6	26674.1
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	DAQQSSSPAADNLR	DAQQSSSPAADNLR	3	DAQQSSSPAADNLR3	3895.04	9137.85	7605.22
A0A8I6G6W8	A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	1	DAQQVEPEGQEKPSPAAVR	DAQQVEPEGQEKPSPAAVR	3	DAQQVEPEGQEKPSPAAVR3	21936.7	26500.8	31226.6
D3ZAI6	D3ZAI6	D3ZAI6_RAT	Nt5dc3	5'-nucleotidase domain containing 3	1	DAQSQLVLQEWK	DAQSQLVLQEWK	2	DAQSQLVLQEWK2	9542.67	7157.31	7011.67
Q3B7U4	Q3B7U4	CTU2_RAT	Ctu2	Cytoplasmic tRNA 2-thiolation protein 2	1	DAQTEALSR	DAQTEALSR	2	DAQTEALSR2	10502.6	8908.49	8047.43
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	DAQVLESFSETLLK	DAQVLESFSETLLK	2	DAQVLESFSETLLK2	5122.2	17482.4	11596.6
F7FQB8	F7FQB8	F7FQB8_RAT	Kpna4	Karyopherin subunit alpha 4	1	DAQVVQVVLDGLSNILK	DAQVVQVVLDGLSNILK	2	DAQVVQVVLDGLSNILK2	15861.8		
F7FQB8	F7FQB8	F7FQB8_RAT	Kpna4	Karyopherin subunit alpha 4	1	DAQVVQVVLDGLSNILK	DAQVVQVVLDGLSNILK	3	DAQVVQVVLDGLSNILK3	4809.68	4131.31	3186.03
Q63433	Q63433	PKN1_RAT	Pkn1	Serine/threonine-protein kinase N1	1	DARPLTAAEQAAFR	DARPLTAAEQAAFR	3	DARPLTAAEQAAFR3	3547.54		
F1LZ05	F1LZ05	F1LZ05_RAT	Parp14	Poly [ADP-ribose] polymerase	1	DASAALSGIR	DASAALSGIR	2	DASAALSGIR2	4536.1	4087.56	
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	DASAPGGPPER	DASAPGGPPER	2	DASAPGGPPER2	1.11377e+06	1.12677e+06	1.29431e+06
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	DASAVSLSESK	DASAVSLSESK	2	DASAVSLSESK2	30764.5	25433.2	33823.7
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	DASDDLDDLNFFNQK	DASDDLDDLNFFNQK	2	DASDDLDDLNFFNQK2	29659.3	50779.7	41386.4
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	DASDDLDDLNFFNQK	DASDDLDDLNFFNQK	3	DASDDLDDLNFFNQK3	3334.86	677.966	
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	DASDFVSSLLPFGNK	DASDFVSSLLPFGNK	2	DASDFVSSLLPFGNK2	109922	98210.1	97059.6
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	DASDFVSSLLPFGNK	DASDFVSSLLPFGNK	3	DASDFVSSLLPFGNK3	14484.1	14614.4	16692.8
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	DASDFVSSLLPFGNKK	DASDFVSSLLPFGNKK	2	DASDFVSSLLPFGNKK2	32218.3	28076.9	29331
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	DASDFVSSLLPFGNKK	DASDFVSSLLPFGNKK	3	DASDFVSSLLPFGNKK3	60737	72395.7	72215.1
D4A7V9	D4A7V9	E2AK4_RAT	Eif2ak4	eIF-2-alpha kinase GCN2	1	DASDNLAVQTLK	DASDNLAVQTLK	2	DASDNLAVQTLK2	2375.67	1813.37	2184.6
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	DASESSELSR	DASESSELSR	2	DASESSELSR2	70647.1	76944.5	68692.8
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	DASFSESPQR	DASFSESPQR	2	DASFSESPQR2	180788	182344	178905
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	DASHEQAVEAIR	DASHEQAVEAIR	3	DASHEQAVEAIR3	6691.34	2294.52	3757.7
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	DASHEQAVEAIRK	DASHEQAVEAIRK	3	DASHEQAVEAIRK3	9267.43	4633.79	8520.86
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	DASIFQWR	DASIFQWR	2	DASIFQWR2	25548.4	30937.7	26835
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	DASLAPAAQEPPAPR	DASLAPAAQEPPAPR	2	DASLAPAAQEPPAPR2	218149	236509	213986
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	DASLAPAAQEPPAPR	DASLAPAAQEPPAPR	3	DASLAPAAQEPPAPR3	28201.8	43207.6	23305.3
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	DASLEETK	DASLEETK	2	DASLEETK2	38596.8	35463.7	42313.3
A0A8I6AFT7	A0A8I6AFT7	A0A8I6AFT7_RAT	Nadk	NAD(+) kinase	1	DASLLQPFK	DASLLQPFK	2	DASLLQPFK2	2822.21		
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	DASLMVTNDGATILK	DASLMVTNDGATILK	2	DASLMVTNDGATILK2	152523	136064	140881
A0A8I6GEV9	A0A8I6GEV9	A0A8I6GEV9_RAT	Abce1	ATP binding cassette subfamily E member 1	1	DASLVFK	DASLVFK	2	DASLVFK2	8617	7443.22	9555.99
A0A8I6A9T1	A0A8I6A9T1	A0A8I6A9T1_RAT	Traf7	TNF receptor associated factor 7	1	DASMLNDELSHINAR	DASMLNDELSHINAR	3	DASMLNDELSHINAR3	5003.56	3922.14	8283.86
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	DASNCQEQLDEFRK	DASNC(UniMod:4)QEQLDEFRK	3	DASNC(UniMod:4)QEQLDEFRK3	10044.4	18689.4	20117.2
A0A0G2K0G9	A0A0G2K0G9	A0A0G2K0G9_RAT	Rin3	Ras and Rab interactor 3	1	DASNQPYLVVR	DASNQPYLVVR	2	DASNQPYLVVR2	29483.3	32173.1	28205.9
B0BN63	B0BN63	B0BN63_RAT	Ahsa1	Activator of Hsp90 ATPase activity 1	1	DASNWSTEK	DASNWSTEK	2	DASNWSTEK2	15578.3	13249	10574.6
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	DASPGPLIDVSNISTPR	DASPGPLIDVSNISTPR	2	DASPGPLIDVSNISTPR2	59473.3	66855.4	60892.8
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	DASPGPLIDVSNISTPR	DASPGPLIDVSNISTPR	3	DASPGPLIDVSNISTPR3	6258.26	2855.51	7635.15
Q5FVL2	Q5FVL2	EMC8_RAT	Emc8	ER membrane protein complex subunit 8	1	DASPNQVAEK	DASPNQVAEK	2	DASPNQVAEK2	94429.2	68990.5	90358.8
Q9Z0J5	Q9Z0J5	TRXR2_RAT	Txnrd2	Thioredoxin reductase 2, mitochondrial	1	DASQCYIK	DASQC(UniMod:4)YIK	2	DASQC(UniMod:4)YIK2	6779.45	4281.87	7384.84
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	DASQIGGEEGLVPSQHPGQADEK	DASQIGGEEGLVPSQHPGQADEK	3	DASQIGGEEGLVPSQHPGQADEK3	183344	212034	211961
G3V8L0	G3V8L0	G3V8L0_RAT	Wdr24	GATOR complex protein WDR24	1	DASQPVER	DASQPVER	2	DASQPVER2		6217.04	7203.81
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	DASQTGWGYWGSWGK	DASQTGWGYWGSWGK	2	DASQTGWGYWGSWGK2	16566	22549.3	15239.7
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	DASSQEASSPLLTGQVLER	DASSQEASSPLLTGQVLER	3	DASSQEASSPLLTGQVLER3	13079.5	16819.4	11487.9
Q9JHB5	Q9JHB5	TSNAX_RAT	Tsnax	Translin-associated protein X	1	DASSSSPVMLAFK	DASSSSPVMLAFK	2	DASSSSPVMLAFK2	9947.9	13718.8	8266.46
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	DASTLGLSQIK	DASTLGLSQIK	2	DASTLGLSQIK2	16599.6	16402.8	18504.7
D3ZCG1	D3ZCG1	D3ZCG1_RAT	Dipk2b	Divergent protein kinase domain 2B	1	DASTNLEVFGATSLLK	DASTNLEVFGATSLLK	2	DASTNLEVFGATSLLK2	6534.44	5286.25	5878.4
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	DASTPMVNSLHPPR	DASTPMVNSLHPPR	2	DASTPMVNSLHPPR2	17998.5	33088.5	19063.7
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	DASTPMVNSLHPPR	DASTPMVNSLHPPR	3	DASTPMVNSLHPPR3	170724	295726	197736
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	DASVAEAWLIAQEPYLASR	DASVAEAWLIAQEPYLASR	3	DASVAEAWLIAQEPYLASR3	11277.7	16422.4	13447.6
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	DASVAEAWLLGQEPYLSSR	DASVAEAWLLGQEPYLSSR	3	DASVAEAWLLGQEPYLSSR3	301072	308069	270195
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	DASVGTK	DASVGTK	1	DASVGTK1			8017.87
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	DASVVGFFR	DASVVGFFR	2	DASVVGFFR2	352527	278195	280491
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	DATAEQQEAGSDSENSR	DATAEQQEAGSDSENSR	2	DATAEQQEAGSDSENSR2			2483.12
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	DATCINDVNGFR	DATC(UniMod:4)INDVNGFR	2	DATC(UniMod:4)INDVNGFR2	6461.32	13892.9	11088.8
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	DATCNCDYNCQHYMECCPDFK	DATC(UniMod:4)NC(UniMod:4)DYNC(UniMod:4)QHYMEC(UniMod:4)C(UniMod:4)PDFK	3	DATC(UniMod:4)NC(UniMod:4)DYNC(UniMod:4)QHYMEC(UniMod:4)C(UniMod:4)PDFK3	179210	190566	182530
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	DATCNCDYNCQHYMECCPDFK	DATC(UniMod:4)NC(UniMod:4)DYNC(UniMod:4)QHYMEC(UniMod:4)C(UniMod:4)PDFK	4	DATC(UniMod:4)NC(UniMod:4)DYNC(UniMod:4)QHYMEC(UniMod:4)C(UniMod:4)PDFK4	3043.2	3837.93	
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	DATCNCDYNCQHYMECCPDFKR	DATC(UniMod:4)NC(UniMod:4)DYNC(UniMod:4)QHYMEC(UniMod:4)C(UniMod:4)PDFKR	4	DATC(UniMod:4)NC(UniMod:4)DYNC(UniMod:4)QHYMEC(UniMod:4)C(UniMod:4)PDFKR4	38416.2	42179.5	43949.7
P14423	P14423	PA2GA_RAT	Pla2g2a	Phospholipase A2, membrane associated	1	DATDWCCVTHDCCYNR	DATDWC(UniMod:4)C(UniMod:4)VTHDC(UniMod:4)C(UniMod:4)YNR	3	DATDWC(UniMod:4)C(UniMod:4)VTHDC(UniMod:4)C(UniMod:4)YNR3	1.10399e+06	1.19075e+06	1.19841e+06
P14423	P14423	PA2GA_RAT	Pla2g2a	Phospholipase A2, membrane associated	1	DATDWCCVTHDCCYNRLEK	DATDWC(UniMod:4)C(UniMod:4)VTHDC(UniMod:4)C(UniMod:4)YNRLEK	3	DATDWC(UniMod:4)C(UniMod:4)VTHDC(UniMod:4)C(UniMod:4)YNRLEK3	21636.3	19543.5	30687.3
P14423	P14423	PA2GA_RAT	Pla2g2a	Phospholipase A2, membrane associated	1	DATDWCCVTHDCCYNRLEK	DATDWC(UniMod:4)C(UniMod:4)VTHDC(UniMod:4)C(UniMod:4)YNRLEK	4	DATDWC(UniMod:4)C(UniMod:4)VTHDC(UniMod:4)C(UniMod:4)YNRLEK4	11065.5	16793	24016.2
E9PU42	E9PU42	E9PU42_RAT	Vps26c	VPS26 endosomal protein sorting factor C	1	DATEIQNIQIADGDICR	DATEIQNIQIADGDIC(UniMod:4)R	3	DATEIQNIQIADGDIC(UniMod:4)R3	2003.02		2602.14
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	DATETPAVTEAASILK	DATETPAVTEAASILK	2	DATETPAVTEAASILK2	13306.8	16409.6	19942.5
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	DATHDEAVQALK	DATHDEAVQALK	2	DATHDEAVQALK2	29592.2	24125.1	14503.8
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	DATHDEAVQALK	DATHDEAVQALK	3	DATHDEAVQALK3	68755.6	69763.3	63626.6
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	DATHDEAVQALKR	DATHDEAVQALKR	3	DATHDEAVQALKR3	44559.3	39231.5	40743.9
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	DATIASLEETNR	DATIASLEETNR	2	DATIASLEETNR2	73080.5	77685.1	79523.8
P38062	P38062	MAP2_RAT	Metap2	Methionine aminopeptidase 2	1	DATNTGIK	DATNTGIK	2	DATNTGIK2		39811.4	
P04764	M0R5J4;A0A8I6GJ97;A0A8I6ASH7;P04764	ENOA_RAT	Eno1	Alpha-enolase	0	DATNVGDEGGFAPNILENK	DATNVGDEGGFAPNILENK	3	DATNVGDEGGFAPNILENK3	72427	68472.5	85233.8
P04764	M0R5J4;A0A8I6GJ97;P04764	ENOA_RAT	Eno1	Alpha-enolase	0	DATNVGDEGGFAPNILENKEALELLK	DATNVGDEGGFAPNILENKEALELLK	3	DATNVGDEGGFAPNILENKEALELLK3	4934.19	7462.76	8969.46
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	DATPYPALIK	DATPYPALIK	2	DATPYPALIK2	20072	21104.4	26630.6
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	DATQLMCADLNLLQQQAR	DATQLMC(UniMod:4)ADLNLLQQQAR	3	DATQLMC(UniMod:4)ADLNLLQQQAR3	14196.3	22864.5	16688.3
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	DATSHVLTDLEPGQEYTVLLTAEK	DATSHVLTDLEPGQEYTVLLTAEK	3	DATSHVLTDLEPGQEYTVLLTAEK3	721374	795124	714382
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	DATSHVLTDLEPGQEYTVLLTAEK	DATSHVLTDLEPGQEYTVLLTAEK	4	DATSHVLTDLEPGQEYTVLLTAEK4	2192.68	2021.78	3042.68
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	DATSLLAAGEGGLLDEVEPLRPDELER	DATSLLAAGEGGLLDEVEPLRPDELER	3	DATSLLAAGEGGLLDEVEPLRPDELER3	135061	134142	101582
D3ZDI7	D3ZDI7	D3ZDI7_RAT	Ppp2r5a	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	DATSNEQQELFCQK	DATSNEQQELFC(UniMod:4)QK	2	DATSNEQQELFC(UniMod:4)QK2	5544.67	7663.53	1603.1
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	DATSRPTDNVLIPQLIR	DATSRPTDNVLIPQLIR	3	DATSRPTDNVLIPQLIR3	28199.5	27614.7	22323.1
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	DATVACWELGCGK	DATVAC(UniMod:4)WELGC(UniMod:4)GK	2	DATVAC(UniMod:4)WELGC(UniMod:4)GK2	3806.46	10757.5	1499.89
D3ZYB4	D3ZYB4	D3ZYB4_RAT	Lpin2	phosphatidate phosphatase	1	DATVEDTTCTIVKPKPR	DATVEDTTC(UniMod:4)TIVKPKPR	4	DATVEDTTC(UniMod:4)TIVKPKPR4	1508.64	7410.02	3219.38
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	DAVAITK	DAVAITK	1	DAVAITK1	6585.52		4947.38
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	DAVAPGADTQK	DAVAPGADTQK	2	DAVAPGADTQK2		57623.4	
Q5U2N3	Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	1	DAVAPGEYK	DAVAPGEYK	2	DAVAPGEYK2	18993.7	21093.9	23395
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	DAVAVIQYLVWLEK	DAVAVIQYLVWLEK	2	DAVAVIQYLVWLEK2		3966.97	8249.04
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	DAVDFDVR	DAVDFDVR	2	DAVDFDVR2	38870.8	48749.2	51099
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	DAVDWVHYK	DAVDWVHYK	2	DAVDWVHYK2	49707.8	93084.2	104244
D4A3V6	D4A3V6	D4A3V6_RAT	Bloc1s3	Biogenesis of lysosome-related organelles complex 1 subunit 3	1	DAVEAWGTEETPVLAPAR	DAVEAWGTEETPVLAPAR	2	DAVEAWGTEETPVLAPAR2	2308.9	5782.68	2552.35
D4A3V6	D4A3V6	D4A3V6_RAT	Bloc1s3	Biogenesis of lysosome-related organelles complex 1 subunit 3	1	DAVEAWGTEETPVLAPAR	DAVEAWGTEETPVLAPAR	3	DAVEAWGTEETPVLAPAR3	2993.26	1969.64	
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	DAVEHLTK	DAVEHLTK	2	DAVEHLTK2	11189.4	17329.2	17598.8
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	DAVEVLVR	DAVEVLVR	2	DAVEVLVR2	37370.9	51864.2	34957
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	DAVFIPAGWDNDK	DAVFIPAGWDNDK	2	DAVFIPAGWDNDK2	33324.8	17724.6	33636.7
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	DAVFIPAGWDNDKK	DAVFIPAGWDNDKK	2	DAVFIPAGWDNDKK2	20421.5	22026.3	16237.6
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	DAVFIPAGWDNDKK	DAVFIPAGWDNDKK	3	DAVFIPAGWDNDKK3	67003.9	94534.2	106999
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	DAVFIPAGWDNEK	DAVFIPAGWDNEK	2	DAVFIPAGWDNEK2	106287	102009	98789.6
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	DAVFIPAGWDNEKK	DAVFIPAGWDNEKK	2	DAVFIPAGWDNEKK2	21910.6	33771.9	25529.6
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	DAVFIPAGWDNEKK	DAVFIPAGWDNEKK	3	DAVFIPAGWDNEKK3	57176	70842.2	83624.3
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	DAVHYGGWEHR	DAVHYGGWEHR	2	DAVHYGGWEHR2	67109.1	60341.6	50983.4
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	DAVHYGGWEHR	DAVHYGGWEHR	3	DAVHYGGWEHR3	398306	418535	403135
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	DAVITVPAFFNQAER	DAVITVPAFFNQAER	2	DAVITVPAFFNQAER2	285059	351696	300119
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	DAVITVPAFFNQAER	DAVITVPAFFNQAER	3	DAVITVPAFFNQAER3	26780.6	37737.4	36666.5
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	DAVIYPILVEFTR	DAVIYPILVEFTR	2	DAVIYPILVEFTR2	143648	176047	168472
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	DAVIYPILVEFTR	DAVIYPILVEFTR	3	DAVIYPILVEFTR3	58107.6	59642.4	76281.3
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	DAVLDAWAEDVDLR	DAVLDAWAEDVDLR	2	DAVLDAWAEDVDLR2	111825	136526	81245.3
A0A8I5ZLY7	A0A8I5ZLY7	A0A8I5ZLY7_RAT	Tapbp	TAP binding protein	1	DAVLDLR	DAVLDLR	2	DAVLDLR2	173743	145316	192373
P84083	P61206;P84083;P84079	ARF5_RAT	Arf5	ADP-ribosylation factor 5	0	DAVLLVFANK	DAVLLVFANK	2	DAVLLVFANK2	555810	492234	514510
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	DAVNEEESVHWQR	DAVNEEESVHWQR	2	DAVNEEESVHWQR2	44215.9	28561.9	19850.2
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	DAVNEEESVHWQR	DAVNEEESVHWQR	3	DAVNEEESVHWQR3	164316	133285	179995
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	DAVNEEESVHWQRPK	DAVNEEESVHWQRPK	2	DAVNEEESVHWQRPK2	104265	91422.4	82586.7
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	DAVNEEESVHWQRPK	DAVNEEESVHWQRPK	3	DAVNEEESVHWQRPK3	749787	688085	623817
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	DAVNEEESVHWQRPK	DAVNEEESVHWQRPK	4	DAVNEEESVHWQRPK4	674896	629499	584578
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	DAVPLQEELSGK	DAVPLQEELSGK	2	DAVPLQEELSGK2	486447	496339	494728
Q63621	Q63621	IL1AP_RAT	Il1rap	Interleukin-1 receptor accessory protein	1	DAVPPHIYSPNDR	DAVPPHIYSPNDR	3	DAVPPHIYSPNDR3	23125.2	24962.4	31205
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	DAVPSEAAEHLK	DAVPSEAAEHLK	3	DAVPSEAAEHLK3		6856.85	
Q66H50	Q66H50	FACR1_RAT	Far1	Fatty acyl-CoA reductase 1	1	DAVQLNVIATR	DAVQLNVIATR	2	DAVQLNVIATR2		1134.29	
P40112	P40112	PSB3_RAT	Psmb3	Proteasome subunit beta type-3	1	DAVSGMGVIVHIIEK	DAVSGMGVIVHIIEK	3	DAVSGMGVIVHIIEK3	7359.65	2971.15	1647.95
P40112	P40112	PSB3_RAT	Psmb3	Proteasome subunit beta type-3	1	DAVSGMGVIVHIIEKDK	DAVSGMGVIVHIIEKDK	3	DAVSGMGVIVHIIEKDK3	29239.6	29130.4	39062
P40112	P40112	PSB3_RAT	Psmb3	Proteasome subunit beta type-3	1	DAVSGMGVIVHIIEKDK	DAVSGMGVIVHIIEKDK	4	DAVSGMGVIVHIIEKDK4	16895.9	16643.9	18456.9
P63074	P63074;A0A8I6G664	IF4E_RAT	Eif4e	Eukaryotic translation initiation factor 4E	0	DAVTHIGR	DAVTHIGR	2	DAVTHIGR2	49907.9	38237.2	34376.8
P62804	P62804	H4_RAT	H4c16	Histone H4	1	DAVTYTEHAK	DAVTYTEHAK	2	DAVTYTEHAK2	64531.9	27620.8	15275.1
Q62825	Q62825	EXOC3_RAT	Exoc3	Exocyst complex component 3	1	DAVVQHSQLAAAVENLK	DAVVQHSQLAAAVENLK	3	DAVVQHSQLAAAVENLK3	6661.84	9882.94	12390.8
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	DAVVTYTAESK	DAVVTYTAESK	2	DAVVTYTAESK2	12258	15221.5	17446.7
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	DAVYTLSAMTSGIR	DAVYTLSAMTSGIR	2	DAVYTLSAMTSGIR2	34455.8	23877.3	37261.4
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	DAVYTLSAMTSGIR	DAVYTLSAMTSGIR	3	DAVYTLSAMTSGIR3	4719	4347.15	7652.82
Q07014	Q9WUD9;P50545;F1LM93;Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	0	DAWEIPR	DAWEIPR	2	DAWEIPR2	1.02913e+06	1.0556e+06	1.12799e+06
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	DAWGPGVAK	DAWGPGVAK	2	DAWGPGVAK2	109040	92795.5	107871
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	DAWNHDLADFLDNPLGTEASK	DAWNHDLADFLDNPLGTEASK	3	DAWNHDLADFLDNPLGTEASK3	13468.1	13560.6	9138.93
Q4QQV2	Q4QQV2	DOK1_RAT	Dok1	Docking protein 1	1	DAWWCQAR	DAWWC(UniMod:4)QAR	2	DAWWC(UniMod:4)QAR2	77185.8	82746	83343.1
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	DAYEDPR	DAYEDPR	2	DAYEDPR2	353523	315459	305572
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	DAYEDPRFNAEVDQITGYK	DAYEDPRFNAEVDQITGYK	3	DAYEDPRFNAEVDQITGYK3	21943.6	36958.4	37184.7
Q9ERE6	Q9ERE6	MPRIP_RAT	Mprip	Myosin phosphatase Rho-interacting protein	1	DAYELEVLLR	DAYELEVLLR	2	DAYELEVLLR2	11776.5		4555.56
Q9ESC1	Q9ESC1	AGRL4_RAT	Adgrl4	Adhesion G protein-coupled receptor L4	1	DAYFGSALTEFGK	DAYFGSALTEFGK	2	DAYFGSALTEFGK2	115307	118388	139890
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	DAYNIFLK	DAYNIFLK	2	DAYNIFLK2	5977.82	13292.3	9214.9
A0A8I6AE91	A0A8I6AE91	A0A8I6AE91_RAT	Gga2	Golgi associated, gamma adaptin ear containing, ARF binding protein 2	1	DAYQMLK	DAYQMLK	2	DAYQMLK2	14116.4	6688.24	9094.1
B1WC49	B1WC49	B1WC49_RAT	Api5	Apoptosis inhibitor 5	1	DAYQVILDGVK	DAYQVILDGVK	2	DAYQVILDGVK2	1612.2		1165.7
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	DAYREFDRK	DAYREFDRK	3	DAYREFDRK3	29199.8	30037.4	39096.8
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	DAYRPEETDVK	DAYRPEETDVK	2	DAYRPEETDVK2	2318.87	2760.7	
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	DAYRPEETDVK	DAYRPEETDVK	3	DAYRPEETDVK3	25303.5	35360.4	31819.9
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	DAYRPTTDADK	DAYRPTTDADK	2	DAYRPTTDADK2	5961.85	5698.2	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	DAYRPTTDADK	DAYRPTTDADK	3	DAYRPTTDADK3		68694.5	
P28075	P28075	PSB5_RAT	Psmb5	Proteasome subunit beta type-5	1	DAYSGGAVNLYHVR	DAYSGGAVNLYHVR	2	DAYSGGAVNLYHVR2	216553	198339	206568
P28075	P28075	PSB5_RAT	Psmb5	Proteasome subunit beta type-5	1	DAYSGGAVNLYHVR	DAYSGGAVNLYHVR	3	DAYSGGAVNLYHVR3	880974	1.04192e+06	1.10691e+06
Q499T5	Q499T5	Q499T5_RAT	Capn7	Calpain 7	1	DAYSLANNPQYK	DAYSLANNPQYK	2	DAYSLANNPQYK2	2261.54	1109.27	1347.44
A0A8I5Y8A9	A0A8I5Y8A9	A0A8I5Y8A9_RAT	Gltpd2	Glycolipid transfer protein domain containing 2	1	DAYSTALAPYHPWLIR	DAYSTALAPYHPWLIR	2	DAYSTALAPYHPWLIR2	11760.9	11756.2	7711.92
A0A8I5Y8A9	A0A8I5Y8A9	A0A8I5Y8A9_RAT	Gltpd2	Glycolipid transfer protein domain containing 2	1	DAYSTALAPYHPWLIR	DAYSTALAPYHPWLIR	3	DAYSTALAPYHPWLIR3	55590.8	49267.1	58014.8
Q7TSU1	D4A631;Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	0	DAYVQALAR	DAYVQALAR	2	DAYVQALAR2	24094.9	33092.2	26319.8
A0A8J8YNE4	A0A8J8YNE4	A0A8J8YNE4_RAT	Apool	MICOS complex subunit	1	DAYVYLK	DAYVYLK	2	DAYVYLK2	42240.7	43996.5	45757.9
Q5XIB4	Q5XIB4	UFSP2_RAT	Ufsp2	Ufm1-specific protease 2	1	DAYYNLCLPQRPNAL	DAYYNLC(UniMod:4)LPQRPNAL	2	DAYYNLC(UniMod:4)LPQRPNAL2	5244.91	4821.48	5280.5
Q5RK23	Q5RK23	ABHD1_RAT	Abhd1	Protein ABHD1	1	DCAAYYHASSPR	DC(UniMod:4)AAYYHASSPR	3	DC(UniMod:4)AAYYHASSPR3	1746.4		2454.18
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	DCAEAQGAGHWQSGVYELR	DC(UniMod:4)AEAQGAGHWQSGVYELR	3	DC(UniMod:4)AEAQGAGHWQSGVYELR3	109279	123312	123142
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	DCAIDPTCVLCMDCFQSSVHK	DC(UniMod:4)AIDPTC(UniMod:4)VLC(UniMod:4)MDC(UniMod:4)FQSSVHK	3	DC(UniMod:4)AIDPTC(UniMod:4)VLC(UniMod:4)MDC(UniMod:4)FQSSVHK3	20172.4	18905.7	30207.4
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	DCANWINVVCR	DC(UniMod:4)ANWINVVC(UniMod:4)R	2	DC(UniMod:4)ANWINVVC(UniMod:4)R2	13227.3	11723.3	13443.9
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	DCARPPPPPLQADR	DC(UniMod:4)ARPPPPPLQADR	3	DC(UniMod:4)ARPPPPPLQADR3	10973.9	10310.5	11932.6
Q64165	Q64165	Q64165_RAT	Gcnt1	Glucosaminyl (N-acetyl) transferase 1	1	DCASFIR	DC(UniMod:4)ASFIR	2	DC(UniMod:4)ASFIR2	21476.4	19616.3	
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	DCATWVNVVCR	DC(UniMod:4)ATWVNVVC(UniMod:4)R	2	DC(UniMod:4)ATWVNVVC(UniMod:4)R2	10332.2	6651.75	3492.45
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	DCAVDPTCVLCMQCFLGSIHR	DC(UniMod:4)AVDPTC(UniMod:4)VLC(UniMod:4)MQC(UniMod:4)FLGSIHR	3	DC(UniMod:4)AVDPTC(UniMod:4)VLC(UniMod:4)MQC(UniMod:4)FLGSIHR3	12268.9	13781.4	10011
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	DCAVIVTQK	DC(UniMod:4)AVIVTQK	2	DC(UniMod:4)AVIVTQK2	3.61128e+06	3.42458e+06	3.92625e+06
Q8R4A1	Q8R4A1	ERO1A_RAT	Ero1a	ERO1-like protein alpha	1	DCAVKPCHSDEVPDGIK	DC(UniMod:4)AVKPC(UniMod:4)HSDEVPDGIK	3	DC(UniMod:4)AVKPC(UniMod:4)HSDEVPDGIK3	68300.5	36143.4	61663.9
Q8R4A1	Q8R4A1	ERO1A_RAT	Ero1a	ERO1-like protein alpha	1	DCAVKPCHSDEVPDGIK	DC(UniMod:4)AVKPC(UniMod:4)HSDEVPDGIK	4	DC(UniMod:4)AVKPC(UniMod:4)HSDEVPDGIK4	20970.7	28577.1	27088.8
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	DCCFEICAPDK	DC(UniMod:4)C(UniMod:4)FEIC(UniMod:4)APDK	2	DC(UniMod:4)C(UniMod:4)FEIC(UniMod:4)APDK2	105118	75020.4	97531.1
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	DCCFEICAPDKR	DC(UniMod:4)C(UniMod:4)FEIC(UniMod:4)APDKR	2	DC(UniMod:4)C(UniMod:4)FEIC(UniMod:4)APDKR2	17811.7	15017.1	5588.06
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	DCCFEICAPDKR	DC(UniMod:4)C(UniMod:4)FEIC(UniMod:4)APDKR	3	DC(UniMod:4)C(UniMod:4)FEIC(UniMod:4)APDKR3	139559	152737	210552
D3ZW49	D3ZW49	D3ZW49_RAT	Tmem9b	TMEM9 domain family, member B	1	DCDCLHVVEPMPVR	DC(UniMod:4)DC(UniMod:4)LHVVEPMPVR	3	DC(UniMod:4)DC(UniMod:4)LHVVEPMPVR3	30601.8	32575.5	33116.8
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	DCDDVLQTHPSGAQNGIFSIK	DC(UniMod:4)DDVLQTHPSGAQNGIFSIK	3	DC(UniMod:4)DDVLQTHPSGAQNGIFSIK3	2.04277e+06	1.9266e+06	2.006e+06
P30839	P11883;P30839	AL3A2_RAT	Aldh3a2	Aldehyde dehydrogenase family 3 member A2	0	DCDLDVACR	DC(UniMod:4)DLDVAC(UniMod:4)R	2	DC(UniMod:4)DLDVAC(UniMod:4)R2	5284.32	466.463	4441.18
P62634	P62634	CNBP_RAT	Cnbp	CCHC-type zinc finger nucleic acid binding protein	1	DCDLQEDACYNCGR	DC(UniMod:4)DLQEDAC(UniMod:4)YNC(UniMod:4)GR	2	DC(UniMod:4)DLQEDAC(UniMod:4)YNC(UniMod:4)GR2	1638.51		
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	DCDPGYHPGPEGTCDDVDECR	DC(UniMod:4)DPGYHPGPEGTC(UniMod:4)DDVDEC(UniMod:4)R	3	DC(UniMod:4)DPGYHPGPEGTC(UniMod:4)DDVDEC(UniMod:4)R3	46132.4	42104.6	38319.7
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	DCDPQLLHHLCWGPLR	DC(UniMod:4)DPQLLHHLC(UniMod:4)WGPLR	4	DC(UniMod:4)DPQLLHHLC(UniMod:4)WGPLR4	5578.72		4456.95
Q4QQT4	Q4QQT4;Q5XI34	2AAB_RAT	Ppp2r1b	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	0	DCEAEVR	DC(UniMod:4)EAEVR	2	DC(UniMod:4)EAEVR2	365777	385038	362846
D3ZE05	D3ZE05	D3ZE05_RAT	Cilp2	Cartilage intermediate layer protein 2	1	DCEDAPVTDSHFR	DC(UniMod:4)EDAPVTDSHFR	3	DC(UniMod:4)EDAPVTDSHFR3	9228.81	6066.67	6757.55
P62944	P52303;P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	DCEDPNPLIR	DC(UniMod:4)EDPNPLIR	2	DC(UniMod:4)EDPNPLIR2	292440	352962	345997
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	DCEECIQLEPTFIK	DC(UniMod:4)EEC(UniMod:4)IQLEPTFIK	2	DC(UniMod:4)EEC(UniMod:4)IQLEPTFIK2	34788.9	31676.2	38446.5
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	DCEECIQLEPTFIK	DC(UniMod:4)EEC(UniMod:4)IQLEPTFIK	3	DC(UniMod:4)EEC(UniMod:4)IQLEPTFIK3	10471.1	9870.56	5978.87
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	DCEHVFAGK	DC(UniMod:4)EHVFAGK	2	DC(UniMod:4)EHVFAGK2	25618.2	27302.7	25508.3
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	DCEHVFAGKK	DC(UniMod:4)EHVFAGKK	2	DC(UniMod:4)EHVFAGKK2	5241.72	7666.36	13427.1
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	DCEHVFAGKK	DC(UniMod:4)EHVFAGKK	3	DC(UniMod:4)EHVFAGKK3	98664.1	174780	222991
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DCEQAENWMAAR	DC(UniMod:4)EQAENWMAAR	2	DC(UniMod:4)EQAENWMAAR2	263849	273682	290893
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DCEQAENWMAAR	DC(UniMod:4)EQAENWMAAR	3	DC(UniMod:4)EQAENWMAAR3	19254.6		9408.05
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	DCEVIER	DC(UniMod:4)EVIER	2	DC(UniMod:4)EVIER2	150867	137539	137995
Q9R1T1	Q9R1T1	BAF_RAT	Banf1	Barrier-to-autointegration factor	1	DCFGCLR	DC(UniMod:4)FGC(UniMod:4)LR	2	DC(UniMod:4)FGC(UniMod:4)LR2	30532.8	21602.7	18793.4
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	DCFIPCTPK	DC(UniMod:4)FIPC(UniMod:4)TPK	2	DC(UniMod:4)FIPC(UniMod:4)TPK2	70650.1	56562.9	55471.2
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	DCFIVYQGHHGDVGAPIADVILPGAAYTEK	DC(UniMod:4)FIVYQGHHGDVGAPIADVILPGAAYTEK	4	DC(UniMod:4)FIVYQGHHGDVGAPIADVILPGAAYTEK4	55351.9	56165.8	58603.6
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	DCFTCSNCK	DC(UniMod:4)FTC(UniMod:4)SNC(UniMod:4)K	2	DC(UniMod:4)FTC(UniMod:4)SNC(UniMod:4)K2	183059	190009	220952
O88994	O88994	MARC2_RAT	Mtarc2	Mitochondrial amidoxime reducing component 2	1	DCGDEVAR	DC(UniMod:4)GDEVAR	2	DC(UniMod:4)GDEVAR2	33208.7	35859.3	37053.8
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	DCGEELK	DC(UniMod:4)GEELK	2	DC(UniMod:4)GEELK2	133141	152982	118875
Q5XIG0	Q5XIG0	NUDT9_RAT	Nudt9	ADP-ribose pyrophosphatase, mitochondrial	1	DCGEWAIPGGMVDPGEK	DC(UniMod:4)GEWAIPGGMVDPGEK	2	DC(UniMod:4)GEWAIPGGMVDPGEK2	6453.31	3385.7	3535.76
D4A3E2	D4A3E2	D4A3E2_RAT	Npepl1	Aminopeptidase-like 1	1	DCGGAAAILGAFR	DC(UniMod:4)GGAAAILGAFR	2	DC(UniMod:4)GGAAAILGAFR2	7013.91	5508.35	6421.56
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	DCGGGDALSNGIK	DC(UniMod:4)GGGDALSNGIK	2	DC(UniMod:4)GGGDALSNGIK2	9167.87	3417.72	2268.73
Q63060	Q63060	GLPK_RAT	Gk	Glycerol kinase	1	DCGIPLSHLQVDGGMTSNK	DC(UniMod:4)GIPLSHLQVDGGMTSNK	3	DC(UniMod:4)GIPLSHLQVDGGMTSNK3	49102.6	54692.2	48966.3
A0A0G2JXT6	A0A0G2JXT6	MTMR6_RAT	Mtmr6	Myotubularin-related protein 6	1	DCHDIYNSLLQLSK	DC(UniMod:4)HDIYNSLLQLSK	3	DC(UniMod:4)HDIYNSLLQLSK3			1895.4
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	DCHDVYVSLIR	DC(UniMod:4)HDVYVSLIR	2	DC(UniMod:4)HDVYVSLIR2	5248.97	9019.85	3341.44
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	DCHDVYVSLIR	DC(UniMod:4)HDVYVSLIR	3	DC(UniMod:4)HDVYVSLIR3	71714.1	90916.9	83699.3
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	DCHEEVYAGSHQYPGR	DC(UniMod:4)HEEVYAGSHQYPGR	3	DC(UniMod:4)HEEVYAGSHQYPGR3	15924.5	9180.84	11829.2
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	DCHEEVYAGSHQYPGR	DC(UniMod:4)HEEVYAGSHQYPGR	4	DC(UniMod:4)HEEVYAGSHQYPGR4	126246	109864	136737
A0A8I6A3H1	A0A8I6A3H1	A0A8I6A3H1_RAT	Ero1b	Endoplasmic reticulum oxidoreductase 1 beta	1	DCHVEPCPESK	DC(UniMod:4)HVEPC(UniMod:4)PESK	3	DC(UniMod:4)HVEPC(UniMod:4)PESK3	10361.8	8636.41	8806.52
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	DCIAVLER	DC(UniMod:4)IAVLER	2	DC(UniMod:4)IAVLER2	34714.6	31483	35424.3
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	DCIELFTTK	DC(UniMod:4)IELFTTK	2	DC(UniMod:4)IELFTTK2	45851.8	35994.3	31728.9
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	DCIFTIDPSTAR	DC(UniMod:4)IFTIDPSTAR	2	DC(UniMod:4)IFTIDPSTAR2	49464.9	39800	56855.1
Q9ESH6	Q9ESH6	GLRX1_RAT	Glrx	Glutaredoxin-1	1	DCIGGCSDLLSMQQNGELTAR	DC(UniMod:4)IGGC(UniMod:4)SDLLSMQQNGELTAR	3	DC(UniMod:4)IGGC(UniMod:4)SDLLSMQQNGELTAR3	6749.87	2261.35	3871.54
P26817	P26817	ARBK1_RAT	Grk2	Beta-adrenergic receptor kinase 1	1	DCIMHGYMSK	DC(UniMod:4)IMHGYMSK	3	DC(UniMod:4)IMHGYMSK3	4055.31	5982.4	3826.71
A0A0G2K1A2	D3ZSY4;A0A0G2K1A2	A0A0G2K1A2_RAT	Mpo	Myeloperoxidase	0	DCIPFFR	DC(UniMod:4)IPFFR	2	DC(UniMod:4)IPFFR2	58390.6	31427	44266.3
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	DCIQSGPGCSWCQK	DC(UniMod:4)IQSGPGC(UniMod:4)SWC(UniMod:4)QK	2	DC(UniMod:4)IQSGPGC(UniMod:4)SWC(UniMod:4)QK2	91562.4	104642	96518.8
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	DCIQSGPGCSWCQK	DC(UniMod:4)IQSGPGC(UniMod:4)SWC(UniMod:4)QK	3	DC(UniMod:4)IQSGPGC(UniMod:4)SWC(UniMod:4)QK3	12282.4		3069.69
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	DCIVPYLLR	DC(UniMod:4)IVPYLLR	2	DC(UniMod:4)IVPYLLR2	20845.3	13800.3	14837.3
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	DCKDVDECSLKPSVCGTAVCK	DC(UniMod:4)KDVDEC(UniMod:4)SLKPSVC(UniMod:4)GTAVC(UniMod:4)K	3	DC(UniMod:4)KDVDEC(UniMod:4)SLKPSVC(UniMod:4)GTAVC(UniMod:4)K3	515144	578495	511626
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	DCKDVDECSLKPSVCGTAVCK	DC(UniMod:4)KDVDEC(UniMod:4)SLKPSVC(UniMod:4)GTAVC(UniMod:4)K	4	DC(UniMod:4)KDVDEC(UniMod:4)SLKPSVC(UniMod:4)GTAVC(UniMod:4)K4	1.14501e+06	1.53169e+06	1.60739e+06
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	DCLASIAR	DC(UniMod:4)LASIAR	2	DC(UniMod:4)LASIAR2	26561.4	15088.8	23466.4
A0A8I5Y6A1	A0A8I5Y6A1	A0A8I5Y6A1_RAT	Ablim1	Actin-binding LIM protein 1	1	DCLCQLCAQPMSSSPK	DC(UniMod:4)LC(UniMod:4)QLC(UniMod:4)AQPMSSSPK	2	DC(UniMod:4)LC(UniMod:4)QLC(UniMod:4)AQPMSSSPK2	2492.83	4865.24	2303.12
A0A8I5Y6A1	A0A8I5Y6A1	A0A8I5Y6A1_RAT	Ablim1	Actin-binding LIM protein 1	1	DCLCQLCAQPMSSSPK	DC(UniMod:4)LC(UniMod:4)QLC(UniMod:4)AQPMSSSPK	3	DC(UniMod:4)LC(UniMod:4)QLC(UniMod:4)AQPMSSSPK3	4027.56	6141.51	4372.86
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	DCLEFIEQLSVPEEK	DC(UniMod:4)LEFIEQLSVPEEK	2	DC(UniMod:4)LEFIEQLSVPEEK2	10589.8	5826.81	4900.02
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	DCLEFIEQLSVPEEK	DC(UniMod:4)LEFIEQLSVPEEK	3	DC(UniMod:4)LEFIEQLSVPEEK3	6623.84	7456.57	7310.32
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	DCLFASQSGNQHR	DC(UniMod:4)LFASQSGNQHR	2	DC(UniMod:4)LFASQSGNQHR2	1403.2	1933.09	2845.72
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	DCLFASQSGNQHR	DC(UniMod:4)LFASQSGNQHR	3	DC(UniMod:4)LFASQSGNQHR3	36829.2	40747.7	40629.3
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	DCLFRPLNK	DC(UniMod:4)LFRPLNK	3	DC(UniMod:4)LFRPLNK3	78132.5	80030.3	71427.9
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	DCLFYLR	DC(UniMod:4)LFYLR	2	DC(UniMod:4)LFYLR2	18489.6	12659.1	18486.8
P70541	P70541	EI2BG_RAT	Eif2b3	Translation initiation factor eIF-2B subunit gamma	1	DCLIGSGQR	DC(UniMod:4)LIGSGQR	2	DC(UniMod:4)LIGSGQR2	39250.7	27132.8	49108
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	DCLINAAK	DC(UniMod:4)LINAAK	1	DC(UniMod:4)LINAAK1	764.355	2430.45	
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	DCLINAAK	DC(UniMod:4)LINAAK	2	DC(UniMod:4)LINAAK2	283567	278292	290201
P21775	P07871;P21775	THIKA_RAT	Acaa1a	3-ketoacyl-CoA thiolase A, peroxisomal	0	DCLIPMGITSENVAER	DC(UniMod:4)LIPMGITSENVAER	2	DC(UniMod:4)LIPMGITSENVAER2	99031.1	80571.4	99224.1
F7FF81	F7FF81	F7FF81_RAT	Pfdn5	Prefoldin subunit 5	1	DCLNVLNK	DC(UniMod:4)LNVLNK	2	DC(UniMod:4)LNVLNK2	79538.3	76680.1	72318.6
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	DCLPELK	DC(UniMod:4)LPELK	2	DC(UniMod:4)LPELK2	80414.3	83019.4	51438.7
P58751	P58751	RELN_RAT	Reln	Reelin	1	DCLPTNVECSR	DC(UniMod:4)LPTNVEC(UniMod:4)SR	2	DC(UniMod:4)LPTNVEC(UniMod:4)SR2	183818	201987	191573
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	DCLQDPGGHFR	DC(UniMod:4)LQDPGGHFR	2	DC(UniMod:4)LQDPGGHFR2	13374	9940.71	14277.4
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	DCLQDPGGHFR	DC(UniMod:4)LQDPGGHFR	3	DC(UniMod:4)LQDPGGHFR3	116556	129866	100932
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	DCLSPSPQHGAK	DC(UniMod:4)LSPSPQHGAK	2	DC(UniMod:4)LSPSPQHGAK2	6703.14	6486.48	5038.38
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	DCLSPSPQHGAK	DC(UniMod:4)LSPSPQHGAK	3	DC(UniMod:4)LSPSPQHGAK3	31385.7	31316.8	16642.8
Q63055	Q63055	ARFRP_RAT	Arfrp1	ADP-ribosylation factor-related protein 1	1	DCLTQACSALTGK	DC(UniMod:4)LTQAC(UniMod:4)SALTGK	2	DC(UniMod:4)LTQAC(UniMod:4)SALTGK2	11407.8	5077.22	2782.34
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	DCLVAAAPYGGPIALLR	DC(UniMod:4)LVAAAPYGGPIALLR	2	DC(UniMod:4)LVAAAPYGGPIALLR2	13786.4	17656.3	22981.8
Q5I6B8	Q5I6B8	PI51C_RAT	Pip5k1c	Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma	1	DCLVLESFK	DC(UniMod:4)LVLESFK	2	DC(UniMod:4)LVLESFK2	22941	27988.3	33621.1
Q02589	Q02589	ADPRH_RAT	Adprh	ADP-ribosylhydrolase ARH1	1	DCMGDMDGR	DC(UniMod:4)MGDMDGR	2	DC(UniMod:4)MGDMDGR2	15222.6	13895.7	12343.1
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	DCMLGMEFSGR	DC(UniMod:4)MLGMEFSGR	2	DC(UniMod:4)MLGMEFSGR2	32029.7	32018.8	20945
B0K013	B0K013	B0K013_RAT	Coa4	Cytochrome c oxidase assembly factor 4 homolog	1	DCMSAQQAR	DC(UniMod:4)MSAQQAR	2	DC(UniMod:4)MSAQQAR2	6026.64		4726.94
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	DCNKPSPDDDIQDR	DC(UniMod:4)NKPSPDDDIQDR	2	DC(UniMod:4)NKPSPDDDIQDR2	209144	121442	116008
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	DCNKPSPDDDIQDR	DC(UniMod:4)NKPSPDDDIQDR	3	DC(UniMod:4)NKPSPDDDIQDR3	1.54066e+06	1.11426e+06	991573
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	DCNVAIR	DC(UniMod:4)NVAIR	2	DC(UniMod:4)NVAIR2	30697.5	37209.3	30362.5
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	DCNVIATK	DC(UniMod:4)NVIATK	2	DC(UniMod:4)NVIATK2	13985.9	24506.4	10806.2
G3V785	G3V785	G3V785_RAT	Naa38	N(alpha)-acetyltransferase 38, NatC auxiliary subunit	1	DCNVILGSAQEFLKPSDSFSAGEPR	DC(UniMod:4)NVILGSAQEFLKPSDSFSAGEPR	3	DC(UniMod:4)NVILGSAQEFLKPSDSFSAGEPR3	7592.65	264.613	7153.14
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	DCNVVASK	DC(UniMod:4)NVVASK	2	DC(UniMod:4)NVVASK2		35679.3	
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	DCPDGSDEAPEICPQSK	DC(UniMod:4)PDGSDEAPEIC(UniMod:4)PQSK	2	DC(UniMod:4)PDGSDEAPEIC(UniMod:4)PQSK2	54559.6	61565.2	52859.1
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	DCPDGSDEAPEICPQSK	DC(UniMod:4)PDGSDEAPEIC(UniMod:4)PQSK	3	DC(UniMod:4)PDGSDEAPEIC(UniMod:4)PQSK3	9892.47	3466.38	2047.18
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	DCPDNAEEYER	DC(UniMod:4)PDNAEEYER	2	DC(UniMod:4)PDNAEEYER2	304226	311926	306322
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	DCPGFVFTPR	DC(UniMod:4)PGFVFTPR	2	DC(UniMod:4)PGFVFTPR2	415663	496037	408188
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	DCPGTAEEYER	DC(UniMod:4)PGTAEEYER	2	DC(UniMod:4)PGTAEEYER2	72356	87913.7	67810
E9PT51	E9PT51	E9PT51_RAT	Poldip2	DNA polymerase delta interacting protein 2	1	DCPHISQR	DC(UniMod:4)PHISQR	2	DC(UniMod:4)PHISQR2	2171.29		3196.79
P52303	P52303	AP1B1_RAT	Ap1b1	AP-1 complex subunit beta-1	1	DCPLNTEAASSK	DC(UniMod:4)PLNTEAASSK	2	DC(UniMod:4)PLNTEAASSK2	152196	157261	123406
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	DCPQDFMTRPK	DC(UniMod:4)PQDFMTRPK	2	DC(UniMod:4)PQDFMTRPK2	12863.2	9961.77	
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	DCPQDFMTRPK	DC(UniMod:4)PQDFMTRPK	3	DC(UniMod:4)PQDFMTRPK3	98032.8	78621.2	92365.3
P50609	P50609	FMOD_RAT	Fmod	Fibromodulin	1	DCPQECDCPPNFPTAMYCDNR	DC(UniMod:4)PQEC(UniMod:4)DC(UniMod:4)PPNFPTAMYC(UniMod:4)DNR	3	DC(UniMod:4)PQEC(UniMod:4)DC(UniMod:4)PPNFPTAMYC(UniMod:4)DNR3	19382.2	10236.4	18303.9
P62749	P62749	HPCL1_RAT	Hpcal1	Hippocalcin-like protein 1	1	DCPTGHLTVDEFK	DC(UniMod:4)PTGHLTVDEFK	3	DC(UniMod:4)PTGHLTVDEFK3	20513.7	21828.3	19938.7
P62749	P62749	HPCL1_RAT	Hpcal1	Hippocalcin-like protein 1	1	DCPTGHLTVDEFKK	DC(UniMod:4)PTGHLTVDEFKK	3	DC(UniMod:4)PTGHLTVDEFKK3	46795.3	52720.9	38652
P62749	P62749	HPCL1_RAT	Hpcal1	Hippocalcin-like protein 1	1	DCPTGHLTVDEFKK	DC(UniMod:4)PTGHLTVDEFKK	4	DC(UniMod:4)PTGHLTVDEFKK4	15650.3	11806.8	7556.53
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	DCPTIIHFVLANINFR	DC(UniMod:4)PTIIHFVLANINFR	3	DC(UniMod:4)PTIIHFVLANINFR3	4085.44	4720.68	
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	DCPTPMGTK	DC(UniMod:4)PTPMGTK	2	DC(UniMod:4)PTPMGTK2	910800	865987	1.0544e+06
D4A264	D4A264	D4A264_RAT	Ptgr3	Zinc binding alcohol dehydrogenase, domain containing 2	1	DCPVPLPGDGDLLVR	DC(UniMod:4)PVPLPGDGDLLVR	2	DC(UniMod:4)PVPLPGDGDLLVR2	17965.2	25889.4	24827.8
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	DCPVSSYNEWDPLEEVIVGR	DC(UniMod:4)PVSSYNEWDPLEEVIVGR	3	DC(UniMod:4)PVSSYNEWDPLEEVIVGR3	47854.8	39215.5	65501
P97682	P97682	ESM1_RAT	Esm1	Endothelial cell-specific molecule 1	1	DCPYGTFGMDCK	DC(UniMod:4)PYGTFGMDC(UniMod:4)K	2	DC(UniMod:4)PYGTFGMDC(UniMod:4)K2	10785.8	12340.3	12225.3
P16446	P16446	PIPNA_RAT	Pitpna	Phosphatidylinositol transfer protein alpha isoform	1	DCPYMCAYK	DC(UniMod:4)PYMC(UniMod:4)AYK	2	DC(UniMod:4)PYMC(UniMod:4)AYK2	21284.3	21708.3	30719.9
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	DCQDIANK	DC(UniMod:4)QDIANK	1	DC(UniMod:4)QDIANK1	1.51964e+06	1.42377e+06	1.32869e+06
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	DCQDIANK	DC(UniMod:4)QDIANK	2	DC(UniMod:4)QDIANK2	13608.1	11324.9	9905.35
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	DCQDIANKGAK	DC(UniMod:4)QDIANKGAK	3	DC(UniMod:4)QDIANKGAK3			3431.35
Q6TMA8	Q6TMA8	ANGL4_RAT	Angptl4	Angiopoietin-related protein 4	1	DCQELFQEGER	DC(UniMod:4)QELFQEGER	2	DC(UniMod:4)QELFQEGER2	3159.54		
A0A8I5Y224	A0A8I5Y224	A0A8I5Y224_RAT	Adam9	ADAM metallopeptidase domain 9	1	DCQFLPGGSMCR	DC(UniMod:4)QFLPGGSMC(UniMod:4)R	2	DC(UniMod:4)QFLPGGSMC(UniMod:4)R2		97030.2	82822.5
B1H219	B1H219	B1H219_RAT	Dkk3	Dickkopf WNT signaling pathway inhibitor 3	1	DCQPGLCCAFQR	DC(UniMod:4)QPGLC(UniMod:4)C(UniMod:4)AFQR	2	DC(UniMod:4)QPGLC(UniMod:4)C(UniMod:4)AFQR2	963201	836993	830119
B1H219	B1H219	B1H219_RAT	Dkk3	Dickkopf WNT signaling pathway inhibitor 3	1	DCQPGLCCAFQR	DC(UniMod:4)QPGLC(UniMod:4)C(UniMod:4)AFQR	3	DC(UniMod:4)QPGLC(UniMod:4)C(UniMod:4)AFQR3	91164.4	81028.4	81894.1
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	DCQPLSLTK	DC(UniMod:4)QPLSLTK	2	DC(UniMod:4)QPLSLTK2	20785.2	32611.3	
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	DCRDWSDEPIK	DC(UniMod:4)RDWSDEPIK	3	DC(UniMod:4)RDWSDEPIK3	5056.86	2970.64	4210.03
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	DCRDWSDEPIKECK	DC(UniMod:4)RDWSDEPIKEC(UniMod:4)K	3	DC(UniMod:4)RDWSDEPIKEC(UniMod:4)K3	9846.83	21540.7	18544.3
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	DCRDWSDEPIKECK	DC(UniMod:4)RDWSDEPIKEC(UniMod:4)K	4	DC(UniMod:4)RDWSDEPIKEC(UniMod:4)K4	19052.1	36186.7	21910.5
G3V7P2	G3V7P2	G3V7P2_RAT	Fgl2	Fibrinogen-like 2	1	DCSDYYVLGK	DC(UniMod:4)SDYYVLGK	2	DC(UniMod:4)SDYYVLGK2	2.33471e+06	2.26514e+06	2.62122e+06
G3V7P2	G3V7P2	G3V7P2_RAT	Fgl2	Fibrinogen-like 2	1	DCSDYYVLGKR	DC(UniMod:4)SDYYVLGKR	3	DC(UniMod:4)SDYYVLGKR3	4751.92	6245.77	5784.99
F1LWZ3	F1LWZ3	F1LWZ3_RAT	Rhbdf2	Inactive rhomboid protein	1	DCSETLATFVK	DC(UniMod:4)SETLATFVK	2	DC(UniMod:4)SETLATFVK2	2932.01	8326.74	4539.03
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	DCSGVSVHLTR	DC(UniMod:4)SGVSVHLTR	2	DC(UniMod:4)SGVSVHLTR2	2804.87	6343.21	3499.89
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	DCSGVSVHLTR	DC(UniMod:4)SGVSVHLTR	3	DC(UniMod:4)SGVSVHLTR3	33779.5	31736	33201.2
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	DCSIYGEDTVTDEEGK	DC(UniMod:4)SIYGEDTVTDEEGK	2	DC(UniMod:4)SIYGEDTVTDEEGK2	14625	18355.7	12686.9
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	DCSLSYTSESK	DC(UniMod:4)SLSYTSESK	2	DC(UniMod:4)SLSYTSESK2	1.39667e+06	949444	910875
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	DCSQAMLNGDTTSGLYTIYINGDK	DC(UniMod:4)SQAMLNGDTTSGLYTIYINGDK	3	DC(UniMod:4)SQAMLNGDTTSGLYTIYINGDK3	6281.13	8938.76	12393.3
Q9JK72	Q9JK72	CCS_RAT	Ccs	Copper chaperone for superoxide dismutase	1	DCSSCGDHFNPDGASHGGPQDTDR	DC(UniMod:4)SSC(UniMod:4)GDHFNPDGASHGGPQDTDR	3	DC(UniMod:4)SSC(UniMod:4)GDHFNPDGASHGGPQDTDR3	3589.39	8653.74	9087.91
Q9JK72	Q9JK72	CCS_RAT	Ccs	Copper chaperone for superoxide dismutase	1	DCSSCGDHFNPDGASHGGPQDTDR	DC(UniMod:4)SSC(UniMod:4)GDHFNPDGASHGGPQDTDR	4	DC(UniMod:4)SSC(UniMod:4)GDHFNPDGASHGGPQDTDR4	10018.1	14390.1	11764.6
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	DCSTNPPR	DC(UniMod:4)STNPPR	2	DC(UniMod:4)STNPPR2			19556.7
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	DCSYFNSNAVPLK	DC(UniMod:4)SYFNSNAVPLK	2	DC(UniMod:4)SYFNSNAVPLK2	10342.5	12436.5	6930.32
D4A4P4	D4A4P4	D4A4P4_RAT	Flad1	FAD synthase	1	DCTALLHLFHAAVQR	DC(UniMod:4)TALLHLFHAAVQR	3	DC(UniMod:4)TALLHLFHAAVQR3	6319.41		5317.06
D4A4P4	D4A4P4	D4A4P4_RAT	Flad1	FAD synthase	1	DCTALLHLFHAAVQR	DC(UniMod:4)TALLHLFHAAVQR	4	DC(UniMod:4)TALLHLFHAAVQR4	3624.09	1224.39	2041.93
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	DCTDDPAAHGCVPVLPGK	DC(UniMod:4)TDDPAAHGC(UniMod:4)VPVLPGK	2	DC(UniMod:4)TDDPAAHGC(UniMod:4)VPVLPGK2	1966.35	3382.7	3901.46
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	DCTDDPAAHGCVPVLPGK	DC(UniMod:4)TDDPAAHGC(UniMod:4)VPVLPGK	3	DC(UniMod:4)TDDPAAHGC(UniMod:4)VPVLPGK3	29139	36933.7	45451.1
Q3KRD5	Q3KRD5	TOM34_RAT	Tomm34	Mitochondrial import receptor subunit TOM34	1	DCTEALK	DC(UniMod:4)TEALK	2	DC(UniMod:4)TEALK2	7397.61	3904.2	5101.04
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	DCTETPSLEPPAMSLSTVAK	DC(UniMod:4)TETPSLEPPAMSLSTVAK	3	DC(UniMod:4)TETPSLEPPAMSLSTVAK3	124244	184149	150560
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	DCTGNFCLFR	DC(UniMod:4)TGNFC(UniMod:4)LFR	2	DC(UniMod:4)TGNFC(UniMod:4)LFR2	167459	135726	175187
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	DCTLDNK	DC(UniMod:4)TLDNK	1	DC(UniMod:4)TLDNK1	529.93		
Q9Z2F5	Q9Z2F5;Q9EQH5	CTBP1_RAT	Ctbp1	C-terminal-binding protein 1	0	DCTVEMPILK	DC(UniMod:4)TVEMPILK	2	DC(UniMod:4)TVEMPILK2	37022	26028.2	34025.6
P98166	P98166	VLDLR_RAT	Vldlr	Very low-density lipoprotein receptor	1	DCVDGSDEVNCK	DC(UniMod:4)VDGSDEVNC(UniMod:4)K	2	DC(UniMod:4)VDGSDEVNC(UniMod:4)K2	9505.64	10683	10669.2
D4A2G6	D4A2G6	D4A2G6_RAT	Thbs2	Thrombospondin 2	1	DCVGDVTEHQMCNK	DC(UniMod:4)VGDVTEHQMC(UniMod:4)NK	3	DC(UniMod:4)VGDVTEHQMC(UniMod:4)NK3	23408.2	26707.2	18396.2
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	DCVGDVTENQVCNK	DC(UniMod:4)VGDVTENQVC(UniMod:4)NK	2	DC(UniMod:4)VGDVTENQVC(UniMod:4)NK2	25616.8	26340.6	35078
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	DCVGDVTENQVCNK	DC(UniMod:4)VGDVTENQVC(UniMod:4)NK	3	DC(UniMod:4)VGDVTENQVC(UniMod:4)NK3	864173	945942	999901
P16617	P16617	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	1	DCVGSEVENACANPAAGTVILLENLR	DC(UniMod:4)VGSEVENAC(UniMod:4)ANPAAGTVILLENLR	3	DC(UniMod:4)VGSEVENAC(UniMod:4)ANPAAGTVILLENLR3	40785.9	53062.1	61999.2
D3ZLT7	D3ZLT7	D3ZLT7_RAT	Kiaa2013	Similar to RIKEN cDNA 2510039O18	1	DCVLLQEDFLAHR	DC(UniMod:4)VLLQEDFLAHR	3	DC(UniMod:4)VLLQEDFLAHR3	7367.07	6300.88	3942.89
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	DCVPAMMHSR	DC(UniMod:4)VPAMMHSR	2	DC(UniMod:4)VPAMMHSR2	7670.62	5439.17	4554.09
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	DCVPAMMHSR	DC(UniMod:4)VPAMMHSR	3	DC(UniMod:4)VPAMMHSR3	24363.5	43149.3	31980.5
Q4G063	Q4G063	CREL2_RAT	Creld2	Protein disulfide isomerase Creld2	1	DCVQCEVGWAR	DC(UniMod:4)VQC(UniMod:4)EVGWAR	2	DC(UniMod:4)VQC(UniMod:4)EVGWAR2	114794	87567.7	96724
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	DCVQTYIR	DC(UniMod:4)VQTYIR	2	DC(UniMod:4)VQTYIR2	101758	100165	114044
B5DEN9	B5DEN9	VPS28_RAT	Vps28	Vacuolar protein sorting-associated protein 28 homolog	1	DCVTPNEYTAACSR	DC(UniMod:4)VTPNEYTAAC(UniMod:4)SR	2	DC(UniMod:4)VTPNEYTAAC(UniMod:4)SR2	19195.5	12750.3	22506.6
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	DCVYGFK	DC(UniMod:4)VYGFK	2	DC(UniMod:4)VYGFK2	63216	69456.2	74684.1
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	DCYCTVNLDQEEVFR	DC(UniMod:4)YC(UniMod:4)TVNLDQEEVFR	2	DC(UniMod:4)YC(UniMod:4)TVNLDQEEVFR2	70343.5	69478.9	73335.5
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	DCYCTVNLDQEEVFR	DC(UniMod:4)YC(UniMod:4)TVNLDQEEVFR	3	DC(UniMod:4)YC(UniMod:4)TVNLDQEEVFR3	14317.1	17594.5	24120.9
Q5BJW9	Q5BJW9	DJC25_RAT	Dnajc25	DnaJ homolog subfamily C member 25	1	DCYEVLGVSR	DC(UniMod:4)YEVLGVSR	2	DC(UniMod:4)YEVLGVSR2	11141.5	5215.98	9523.52
P37727	P37727	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	1	DCYNDLPSNVYVCSGPDSGLGNDNAVK	DC(UniMod:4)YNDLPSNVYVC(UniMod:4)SGPDSGLGNDNAVK	3	DC(UniMod:4)YNDLPSNVYVC(UniMod:4)SGPDSGLGNDNAVK3	6062.19	3767.53	6605.51
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	DCYPAVQK	DC(UniMod:4)YPAVQK	2	DC(UniMod:4)YPAVQK2	417284	451518	438068
Q8VHT6	Q8VHT6	AS3MT_RAT	As3mt	Arsenite methyltransferase	1	DCYVLSQLVGQK	DC(UniMod:4)YVLSQLVGQK	2	DC(UniMod:4)YVLSQLVGQK2	2633.57	1475.57	3770.26
A0A8I5ZT10	A0A8I5ZT10	A0A8I5ZT10_RAT	Ccm2	CCM2 scaffold protein	1	DDAAHLVVLK	DDAAHLVVLK	2	DDAAHLVVLK2	1817.41		
Q9Z2X3	Q9Z2X3	PSD10_RAT	Psmd10	26S proteasome non-ATPase regulatory subunit 10	1	DDAGWSPLHIAASAGR	DDAGWSPLHIAASAGR	3	DDAGWSPLHIAASAGR3	60197.2		234589
Q9Z2X3	Q9Z2X3	PSD10_RAT	Psmd10	26S proteasome non-ATPase regulatory subunit 10	1	DDAGWSPLHIAASAGRDEIVK	DDAGWSPLHIAASAGRDEIVK	3	DDAGWSPLHIAASAGRDEIVK3	4628.96	6066.15	6359.45
B5DFH7	B5DFH7	B5DFH7_RAT	Traf2	TNF receptor-associated factor	1	DDAIFIK	DDAIFIK	2	DDAIFIK2	4440.3	4841.84	
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	DDAMLLK	DDAMLLK	1	DDAMLLK1	22691.5	13798.6	25524.2
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	DDAMLLK	DDAMLLK	2	DDAMLLK2	648660	598382	708548
P51583	P51583;A0A0G2K5S4	PUR6_RAT	Paics	Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase	0	DDANNDPQWSEEQLIAAK	DDANNDPQWSEEQLIAAK	3	DDANNDPQWSEEQLIAAK3	3443.45	1514.41	5220.68
Q62785	Q62785	HAP28_RAT	Pdap1	28 kDa heat- and acid-stable phosphoprotein	1	DDATLSGK	DDATLSGK	1	DDATLSGK1	2810.4	2949.18	
Q62785	Q62785	HAP28_RAT	Pdap1	28 kDa heat- and acid-stable phosphoprotein	1	DDATLSGK	DDATLSGK	2	DDATLSGK2	217559	181280	
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	DDAVAASSAK	DDAVAASSAK	1	DDAVAASSAK1	4476.5		
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	DDAVAASSAK	DDAVAASSAK	2	DDAVAASSAK2	34297.9		135881
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	DDAVPNLIQLITNSVEMHAYTVQR	DDAVPNLIQLITNSVEMHAYTVQR	3	DDAVPNLIQLITNSVEMHAYTVQR3		8143.97	9737.31
D3ZET9	D4A1G8;D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	0	DDCELMLQSR	DDC(UniMod:4)ELMLQSR	2	DDC(UniMod:4)ELMLQSR2	15658.8	8644.36	12998.2
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	DDCEQMTGLCSCRPGVAGPK	DDC(UniMod:4)EQMTGLC(UniMod:4)SC(UniMod:4)RPGVAGPK	3	DDC(UniMod:4)EQMTGLC(UniMod:4)SC(UniMod:4)RPGVAGPK3	13316.2	17363.5	8575.85
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	DDCFNVNIQPPVGELLLPVAMSEK	DDC(UniMod:4)FNVNIQPPVGELLLPVAMSEK	3	DDC(UniMod:4)FNVNIQPPVGELLLPVAMSEK3	28194	35023.3	39862.6
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	DDCSQHLQK	DDC(UniMod:4)SQHLQK	2	DDC(UniMod:4)SQHLQK2			2822.42
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	DDDDEEIGGPK	DDDDEEIGGPK	2	DDDDEEIGGPK2	5545.06	9399.95	3716.85
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	DDDDSDIPTAQR	DDDDSDIPTAQR	2	DDDDSDIPTAQR2	28744.6	21826.7	29532.7
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	DDDDVVIGK	DDDDVVIGK	1	DDDDVVIGK1	2135.42	2910.4	2510.98
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	DDDDVVIGK	DDDDVVIGK	2	DDDDVVIGK2	148676	127917	142649
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	DDDEMNTWIQAITSAISSDK	DDDEMNTWIQAITSAISSDK	3	DDDEMNTWIQAITSAISSDK3		12933.1	10879
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	DDDEVFEK	DDDEVFEK	2	DDDEVFEK2	5840.65	5007.61	3029.19
Q5XIN7	Q5XIN7	PMGT1_RAT	Pomgnt1	Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1	1	DDDFTTWTQLAK	DDDFTTWTQLAK	2	DDDFTTWTQLAK2	3844.5	9242.66	7616.72
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	DDDGPSDGNQFPPIAAQDLSFVIK	DDDGPSDGNQFPPIAAQDLSFVIK	3	DDDGPSDGNQFPPIAAQDLSFVIK3	50074	44783.6	61052.6
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	DDDGQSESQAVNGK	DDDGQSESQAVNGK	2	DDDGQSESQAVNGK2	198875		212704
P60711	P60711	ACTB_RAT	Actb	Actin, cytoplasmic 1	1	DDDIAALVVDNGSGMCK	DDDIAALVVDNGSGMC(UniMod:4)K	2	DDDIAALVVDNGSGMC(UniMod:4)K2	1668.62		2423.95
Q07205	Q07205;A0A8I6ADE0;A0A8I6AVQ3	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	DDDIDIDAI	DDDIDIDAI	2	DDDIDIDAI2	2099.4	4817.52	3530.97
Q5U2R7	Q5U2R7	MESD_RAT	Mesd	LRP chaperone MESD	1	DDDIEEGDLPEHK	DDDIEEGDLPEHK	3	DDDIEEGDLPEHK3	7744.04	3785.99	9264.81
A0A8I5ZYD8	A0A8I5ZYD8	A0A8I5ZYD8_RAT	Fhl3	Four and a half LIM domains 3	1	DDDPYCVACFGELFAPK	DDDPYC(UniMod:4)VAC(UniMod:4)FGELFAPK	3	DDDPYC(UniMod:4)VAC(UniMod:4)FGELFAPK3	9223.4	7634.82	7428.56
M0RCA3	M0RCA3	M0RCA3_RAT	Zfpl1	Zinc finger protein-like 1	1	DDDRTAGVHGDCDDDKYR	DDDRTAGVHGDC(UniMod:4)DDDKYR	4	DDDRTAGVHGDC(UniMod:4)DDDKYR4	2298.88	2839.03	4078.93
Q5U300	Q5U300;A0A8I5ZVX0;A0A8I6A544	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	0	DDDSNFHMDFIVAASNLR	DDDSNFHMDFIVAASNLR	3	DDDSNFHMDFIVAASNLR3	16479.7	8378.18	12040.5
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	DDEAEWQELQQSIQR	DDEAEWQELQQSIQR	2	DDEAEWQELQQSIQR2	3659.05	6421.12	2262.01
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	DDEAEWQELQQSIQR	DDEAEWQELQQSIQR	3	DDEAEWQELQQSIQR3	6753.49	4534.02	2755.99
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	DDEECAAPTGVVEK	DDEEC(UniMod:4)AAPTGVVEK	2	DDEEC(UniMod:4)AAPTGVVEK2	1149.62		
B0BNE5	B0BNE5	ESTD_RAT	Esd	S-formylglutathione hydrolase	1	DDEFLSNGQLLPDNFIAACTEK	DDEFLSNGQLLPDNFIAAC(UniMod:4)TEK	3	DDEFLSNGQLLPDNFIAAC(UniMod:4)TEK3	8246.7	8631.55	
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	DDEFTHLYTLIVR	DDEFTHLYTLIVR	3	DDEFTHLYTLIVR3	1559.39	6637.11	6914.48
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	DDEFTHLYTLIVRPDNTYEVK	DDEFTHLYTLIVRPDNTYEVK	3	DDEFTHLYTLIVRPDNTYEVK3	960915	932827	982119
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	DDEFTHLYTLIVRPDNTYEVK	DDEFTHLYTLIVRPDNTYEVK	4	DDEFTHLYTLIVRPDNTYEVK4	1.91263e+06	1.67887e+06	1.66851e+06
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	DDEGGDLLVEEPK	DDEGGDLLVEEPK	2	DDEGGDLLVEEPK2	2278.54		
Q5M871	Q5M871	FAIM3_RAT	Fcmr	Fas apoptotic inhibitory molecule 3	1	DDEGIYACGVGTNTDLGK	DDEGIYAC(UniMod:4)GVGTNTDLGK	2	DDEGIYAC(UniMod:4)GVGTNTDLGK2	233872	219494	214602
Q5M871	Q5M871	FAIM3_RAT	Fcmr	Fas apoptotic inhibitory molecule 3	1	DDEGIYACGVGTNTDLGK	DDEGIYAC(UniMod:4)GVGTNTDLGK	3	DDEGIYAC(UniMod:4)GVGTNTDLGK3	17491.2	21194.8	29174.3
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	DDEIAQLR	DDEIAQLR	2	DDEIAQLR2	4116.73	7327.02	1556.18
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	DDEIPVLK	DDEIPVLK	2	DDEIPVLK2	57951.5	62925	59857.9
Q9QZM5	Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	1	DDELSFK	DDELSFK	2	DDELSFK2	23019.6	9565.65	14002.4
Q63798	Q63798	PSME2_RAT	Psme2	Proteasome activator complex subunit 2	1	DDEMETEQEK	DDEMETEQEK	2	DDEMETEQEK2		43610.2	
Q7TP48	Q7TP48	APMAP_RAT	Apmap	Adipocyte plasma membrane-associated protein	1	DDEPTCGRPLGIR	DDEPTC(UniMod:4)GRPLGIR	3	DDEPTC(UniMod:4)GRPLGIR3	24188.3	22715.3	23604.7
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	DDESNLVEEK	DDESNLVEEK	2	DDESNLVEEK2	31298.3	40064.6	37567.3
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	DDETMYVESK	DDETMYVESK	2	DDETMYVESK2	150887	116539	129086
A0A8I6ANL9	A0A8I6ANL9	A0A8I6ANL9_RAT	Cdc23	Cell division cycle 23	1	DDETVDSLGPLEK	DDETVDSLGPLEK	2	DDETVDSLGPLEK2	8404.87	6974.2	8159.71
P42123	P42123	LDHB_RAT	Ldhb	L-lactate dehydrogenase B chain	1	DDEVAQLR	DDEVAQLR	2	DDEVAQLR2	11109.5	8601.96	6868.71
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	DDEVDRDAPSR	DDEVDRDAPSR	3	DDEVDRDAPSR3	29558.5	18960.8	22449.2
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	DDEVDRDAPSRK	DDEVDRDAPSRK	3	DDEVDRDAPSRK3			6268.75
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	DDEVICTSFYSK	DDEVIC(UniMod:4)TSFYSK	2	DDEVIC(UniMod:4)TSFYSK2	17488.5	13012.3	14938.7
P12749	P12749;M0RE23;D4A1Z2	RL26_RAT	Rpl26	Large ribosomal subunit protein uL24	0	DDEVQVVR	DDEVQVVR	2	DDEVQVVR2	28740.6	20231.2	19115.4
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	DDEWNVYR	DDEWNVYR	2	DDEWNVYR2	4748.57	5179.5	3378.34
O35509	O35509;P62494	RB11B_RAT	Rab11b	Ras-related protein Rab-11B	0	DDEYDYLFK	DDEYDYLFK	2	DDEYDYLFK2	14674.3	17603.4	22201.9
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	DDFDFGTMSHVIR	DDFDFGTMSHVIR	2	DDFDFGTMSHVIR2	7257.17	4663.56	7649.64
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	DDFDFGTMSHVIR	DDFDFGTMSHVIR	3	DDFDFGTMSHVIR3	77312	68857.1	86878.2
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	DDFDHDNVPDIDDICPENVDISETDFR	DDFDHDNVPDIDDIC(UniMod:4)PENVDISETDFR	4	DDFDHDNVPDIDDIC(UniMod:4)PENVDISETDFR4	39697.8	45229.7	38917.1
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	DDFDHDNVPDIDDICPENVDISETDFRR	DDFDHDNVPDIDDIC(UniMod:4)PENVDISETDFRR	4	DDFDHDNVPDIDDIC(UniMod:4)PENVDISETDFRR4	43728	48849.4	36484.5
P58751	P58751	RELN_RAT	Reln	Reelin	1	DDFEGQLESDR	DDFEGQLESDR	2	DDFEGQLESDR2	74661.5	86395.4	67728.3
P58751	P58751	RELN_RAT	Reln	Reelin	1	DDFEGQLESDRFLLMSGGK	DDFEGQLESDRFLLMSGGK	3	DDFEGQLESDRFLLMSGGK3	9932.1	11780.8	
P58751	P58751	RELN_RAT	Reln	Reelin	1	DDFEGQLESDRFLLMSGGKPSR	DDFEGQLESDRFLLMSGGKPSR	3	DDFEGQLESDRFLLMSGGKPSR3	3752.52	6595.36	6115.24
P58751	P58751	RELN_RAT	Reln	Reelin	1	DDFEGQLESDRFLLMSGGKPSR	DDFEGQLESDRFLLMSGGKPSR	4	DDFEGQLESDRFLLMSGGKPSR4	9473.82	10214.6	17115.3
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	DDFLEQSEK	DDFLEQSEK	2	DDFLEQSEK2	386201	305370	337292
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	DDFLGQVDVPLYPLPTENPR	DDFLGQVDVPLYPLPTENPR	3	DDFLGQVDVPLYPLPTENPR3	41046.1	38997.6	87711.2
P25236	P25236	SEPP1_RAT	Selenop	Selenoprotein P	1	DDFLIYDR	DDFLIYDR	2	DDFLIYDR2	1.02348e+06	960226	941979
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	DDFLQQNGYTPYDR	DDFLQQNGYTPYDR	2	DDFLQQNGYTPYDR2	3666.57	5636.66	4372.85
P58751	P58751	RELN_RAT	Reln	Reelin	1	DDFNGNLHPDLWPEVYGAER	DDFNGNLHPDLWPEVYGAER	3	DDFNGNLHPDLWPEVYGAER3	44135.3	58342.5	59651.8
D3Z8L7	D3Z8L7	RRAS_RAT	Rras	Ras-related protein R-Ras	1	DDFPIVLVGNK	DDFPIVLVGNK	2	DDFPIVLVGNK2	10130.4	5048.12	11507
Q642B0	Q642B0	Q642B0_RAT	Gpc4	Glypican 4	1	DDFQTVVSEQCNHLQAIFASR	DDFQTVVSEQC(UniMod:4)NHLQAIFASR	3	DDFQTVVSEQC(UniMod:4)NHLQAIFASR3	20678.4	11212.3	17851.7
Q5XI72	Q5XI72	IF4H_RAT	Eif4h	Eukaryotic translation initiation factor 4H	1	DDFSSGYR	DDFSSGYR	2	DDFSSGYR2	8564.27	7028.58	9264.99
A0JPM9	A0JPM9	EIF3J_RAT	Eif3j	Eukaryotic translation initiation factor 3 subunit J	1	DDFTEFGK	DDFTEFGK	2	DDFTEFGK2	198616	231698	212086
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	DDFTSIIGK	DDFTSIIGK	2	DDFTSIIGK2	5749.52	8555.12	4890.89
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	DDFVLVQR	DDFVLVQR	2	DDFVLVQR2	22260.1	24938.4	22187.4
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	DDFVLVQRPGPGMSQEAVR	DDFVLVQRPGPGMSQEAVR	3	DDFVLVQRPGPGMSQEAVR3	41410.5	87839	69106.9
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	DDGAAILAAVSSIAQK	DDGAAILAAVSSIAQK	2	DDGAAILAAVSSIAQK2	59728	45842.9	60299.8
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	DDGAAILAAVSSIAQK	DDGAAILAAVSSIAQK	3	DDGAAILAAVSSIAQK3	2412.52	9962.47	3880.22
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	DDGFVVR	DDGFVVR	2	DDGFVVR2	13053.8	10152.1	14206.6
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	DDGGFEYK	DDGGFEYK	2	DDGGFEYK2	40639.7	33439.5	26577.6
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	DDGGFEYKK	DDGGFEYKK	2	DDGGFEYKK2	9051.99	7447.31	5141.2
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	DDGHHIWRPK	DDGHHIWRPK	3	DDGHHIWRPK3	4913.21	5964.86	10731
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	DDGIDVR	DDGIDVR	2	DDGIDVR2	38168	21772.9	33361.2
B2GV54	B2GV54	NCEH1_RAT	Nceh1	Neutral cholesterol ester hydrolase 1	1	DDGIMYAK	DDGIMYAK	2	DDGIMYAK2	21126.8	21561.8	16591.4
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	DDGISFSNQTGPAWAGSER	DDGISFSNQTGPAWAGSER	3	DDGISFSNQTGPAWAGSER3	8762.43	7198.45	3366.76
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	DDGKCPLNPHSHLGTYGVFTNAAYDPTP	DDGKC(UniMod:4)PLNPHSHLGTYGVFTNAAYDPTP	4	DDGKC(UniMod:4)PLNPHSHLGTYGVFTNAAYDPTP4	14833.3	3840.02	17461
Q5XFX0	Q5XFX0	TAGL2_RAT	Tagln2	Transgelin-2	1	DDGLFSGDPNWFPK	DDGLFSGDPNWFPK	2	DDGLFSGDPNWFPK2	570296	760165	689147
Q5XFX0	Q5XFX0	TAGL2_RAT	Tagln2	Transgelin-2	1	DDGLFSGDPNWFPKK	DDGLFSGDPNWFPKK	2	DDGLFSGDPNWFPKK2	11938.9	14790.3	14727.2
Q5XFX0	Q5XFX0	TAGL2_RAT	Tagln2	Transgelin-2	1	DDGLFSGDPNWFPKK	DDGLFSGDPNWFPKK	3	DDGLFSGDPNWFPKK3	9925.08	35009.4	21343.8
P01026	P01026	CO3_RAT	C3	Complement C3	1	DDGMLSK	DDGMLSK	1	DDGMLSK1	19890.2	18606.2	19040.4
P01026	P01026	CO3_RAT	C3	Complement C3	1	DDGMLSK	DDGMLSK	2	DDGMLSK2	657169	528512	558342
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	DDGQLSPGVLVR	DDGQLSPGVLVR	2	DDGQLSPGVLVR2	1397.53	3625.18	1478.5
B0BNA5	B0BNA5	COTL1_RAT	Cotl1	Coactosin-like protein	1	DDGSSVIWVTFK	DDGSSVIWVTFK	2	DDGSSVIWVTFK2	120799	109002	101798
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	DDGSWEVIEGYR	DDGSWEVIEGYR	2	DDGSWEVIEGYR2	119114	120932	123640
F1M8Y4	F1M8Y4	F1M8Y4_RAT	Deptor	DEP domain containing MTOR-interacting protein	1	DDGTFPLDNEVK	DDGTFPLDNEVK	2	DDGTFPLDNEVK2			5187.94
D4A3I4	A0A0G2K4W2;D4A3I4;A0A0G2K8T5	D4A3I4_RAT	Btf3l4	Transcription factor BTF3	0	DDGTVIHFNNPK	DDGTVIHFNNPK	3	DDGTVIHFNNPK3	5046.32	8015.42	9821.58
P11762	P11762	LEG1_RAT	Lgals1	Galectin-1	1	DDGTWGTEQR	DDGTWGTEQR	2	DDGTWGTEQR2	6814.49	8137.86	4795.62
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	DDHCGDDVDGPQK	DDHC(UniMod:4)GDDVDGPQK	3	DDHC(UniMod:4)GDDVDGPQK3	12653.2		8790.09
Q62825	Q62825	EXOC3_RAT	Exoc3	Exocyst complex component 3	1	DDHIGALLALR	DDHIGALLALR	3	DDHIGALLALR3	5198.84	7068.13	4985.71
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	DDHNLYQVFINYK	DDHNLYQVFINYK	2	DDHNLYQVFINYK2	1983.99	3265.73	
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	DDHNLYQVFINYK	DDHNLYQVFINYK	3	DDHNLYQVFINYK3	16927	21499.9	18322.1
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	DDIALLR	DDIALLR	2	DDIALLR2	45111.8	44051	48215
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	DDIDNSKPAAGLSR	DDIDNSKPAAGLSR	3	DDIDNSKPAAGLSR3	28811.2	27791.7	17415.3
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	DDIELVK	DDIELVK	1	DDIELVK1	40357.9	70928.6	35390.5
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	DDIELVK	DDIELVK	2	DDIELVK2	1.05327e+06	1.15573e+06	1.52755e+06
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	DDIELVKELTDTGK	DDIELVKELTDTGK	2	DDIELVKELTDTGK2	1830.32	4426.38	
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	DDIELVKELTDTGK	DDIELVKELTDTGK	3	DDIELVKELTDTGK3	20602.7	9618.86	32820
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	DDIENMVK	DDIENMVK	1	DDIENMVK1	1982.37		4538.44
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	DDIENMVK	DDIENMVK	2	DDIENMVK2	149539	119719	124302
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	DDIESLHDK	DDIESLHDK	2	DDIESLHDK2	80531.9	83825.6	88244.3
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	DDIESLHDKFK	DDIESLHDKFK	2	DDIESLHDKFK2	6265.17	6567.54	237.066
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	DDIESLHDKFK	DDIESLHDKFK	3	DDIESLHDKFK3	134944	143484	140829
Q6AXV4	Q6AXV4	SAM50_RAT	Samm50	Sorting and assembly machinery component 50 homolog	1	DDIIICEIGEVFK	DDIIIC(UniMod:4)EIGEVFK	2	DDIIIC(UniMod:4)EIGEVFK2	54373.1	42498.3	43793.4
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	DDIINIFSVASGHLYER	DDIINIFSVASGHLYER	2	DDIINIFSVASGHLYER2		11934.1	6873.22
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	DDIINIFSVASGHLYER	DDIINIFSVASGHLYER	3	DDIINIFSVASGHLYER3	10085.6	7388	3194.61
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	DDILNGSHPVSFDK	DDILNGSHPVSFDK	2	DDILNGSHPVSFDK2	179209	141088	147244
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	DDILNGSHPVSFDK	DDILNGSHPVSFDK	3	DDILNGSHPVSFDK3	403889	427318	489787
A0A8I5Y9V4	A0A8I5Y9V4	A0A8I5Y9V4_RAT	Cars1	cysteine--tRNA ligase	1	DDILPELGVRFEDHEGLPTVVK	DDILPELGVRFEDHEGLPTVVK	3	DDILPELGVRFEDHEGLPTVVK3	6592.63		
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	DDINSYECWCQAGFEGR	DDINSYEC(UniMod:4)WC(UniMod:4)QAGFEGR	3	DDINSYEC(UniMod:4)WC(UniMod:4)QAGFEGR3	2.17752e+06	2.41843e+06	2.40548e+06
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	DDIPPIYPTSPGPVPITLTMER	DDIPPIYPTSPGPVPITLTMER	3	DDIPPIYPTSPGPVPITLTMER3	4065.29	2679.82	6949.75
B5DFD1	B5DFD1	B5DFD1_RAT	Nudcd1	NudC domain-containing protein 1	1	DDIQIQFLPDNINIK	DDIQIQFLPDNINIK	2	DDIQIQFLPDNINIK2	12258.3	5250.03	7671.22
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	DDIRDQVK	DDIRDQVK	2	DDIRDQVK2	17733.6	17026	30501.4
Q9ER24	Q9ER24	ATX10_RAT	Atxn10	Ataxin-10	1	DDISIFLR	DDISIFLR	2	DDISIFLR2	3201.58	6127.91	3512.42
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	DDISLRPDMYPCSLCWK	DDISLRPDMYPC(UniMod:4)SLC(UniMod:4)WK	3	DDISLRPDMYPC(UniMod:4)SLC(UniMod:4)WK3	6261.74	9749.27	6106.06
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	DDITFVSGAPR	DDITFVSGAPR	2	DDITFVSGAPR2	381168	403664	400131
P29410	A0A8I5ZQQ9;P29410	KAD2_RAT	Ak2	Adenylate kinase 2, mitochondrial	0	DDITGEPLIR	DDITGEPLIR	2	DDITGEPLIR2	315562	353432	360097
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	DDKDAIEEK	DDKDAIEEK	2	DDKDAIEEK2	2991.1	4434.4	
P29066	P29066	ARRB1_RAT	Arrb1	Beta-arrestin-1	1	DDKDEEDDGTGSPHLNNR	DDKDEEDDGTGSPHLNNR	3	DDKDEEDDGTGSPHLNNR3	7149.14	7793.16	5556.69
P29066	P29066	ARRB1_RAT	Arrb1	Beta-arrestin-1	1	DDKDEEDDGTGSPHLNNR	DDKDEEDDGTGSPHLNNR	4	DDKDEEDDGTGSPHLNNR4	5014.92	6302.03	5109.8
Q6RUV5	A0A8I6A1P8;Q6RUV5	RAC1_RAT	Rac1	Ras-related C3 botulinum toxin substrate 1	0	DDKDTIEK	DDKDTIEK	1	DDKDTIEK1	3767.8		7107.12
Q6RUV5	A0A8I6A1P8;Q6RUV5	RAC1_RAT	Rac1	Ras-related C3 botulinum toxin substrate 1	0	DDKDTIEK	DDKDTIEK	2	DDKDTIEK2			33505.8
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	DDKELCHVCCMK	DDKELC(UniMod:4)HVC(UniMod:4)C(UniMod:4)MK	2	DDKELC(UniMod:4)HVC(UniMod:4)C(UniMod:4)MK2	1624.3	5390.92	1128.35
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	DDKELCHVCCMK	DDKELC(UniMod:4)HVC(UniMod:4)C(UniMod:4)MK	3	DDKELC(UniMod:4)HVC(UniMod:4)C(UniMod:4)MK3	33375.1	18327.8	37752.6
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	DDKELCHVCCMK	DDKELC(UniMod:4)HVC(UniMod:4)C(UniMod:4)MK	4	DDKELC(UniMod:4)HVC(UniMod:4)C(UniMod:4)MK4	38822.8	30771	38807.9
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	DDKHEQDMVNGIMPIVDK	DDKHEQDMVNGIMPIVDK	3	DDKHEQDMVNGIMPIVDK3	59945.6	60730.3	63364.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	DDKHEQDMVNGIMPIVDK	DDKHEQDMVNGIMPIVDK	4	DDKHEQDMVNGIMPIVDK4	34236.9	50418.9	53986.7
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	DDKPFDLSDPR	DDKPFDLSDPR	3	DDKPFDLSDPR3	25512.1	23038.1	22064.9
A0A8I6A3F2	A0A8I6A3F2;A0A8I6GEK5	A0A8I6A3F2_RAT	AABR07034730.2	Ig-like domain-containing protein	0	DDKRPDGVPDR	DDKRPDGVPDR	2	DDKRPDGVPDR2	83075.9	48208	75049.3
A0A8I6A3F2	A0A8I6A3F2;A0A8I6GEK5	A0A8I6A3F2_RAT	AABR07034730.2	Ig-like domain-containing protein	0	DDKRPDGVPDR	DDKRPDGVPDR	3	DDKRPDGVPDR3	202924	204020	210364
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	DDLELPWRPLYDMVER	DDLELPWRPLYDMVER	3	DDLELPWRPLYDMVER3	21478.7	31463.5	24621.4
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	DDLENVK	DDLENVK	1	DDLENVK1	9227.65	11824.9	18806.8
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	DDLENVK	DDLENVK	2	DDLENVK2	713001	786115	877550
D3ZRN5	D3ZRN5	D3ZRN5_RAT	Ro60	Ro60, Y RNA binding protein	1	DDLEVTHLIEEHQLVR	DDLEVTHLIEEHQLVR	3	DDLEVTHLIEEHQLVR3	6008.51	13675.9	6814.02
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	DDLFFLK	DDLFFLK	2	DDLFFLK2	5386.89	7420.3	11616.4
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	DDLFVSDAFHK	DDLFVSDAFHK	2	DDLFVSDAFHK2	148173	90332.9	84325.7
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	DDLFVSDAFHK	DDLFVSDAFHK	3	DDLFVSDAFHK3	203436	243558	130137
Q9JI03	Q9JI03	CO5A1_RAT	Col5a1	Collagen alpha-1(V) chain	1	DDLGGEFTEETIK	DDLGGEFTEETIK	2	DDLGGEFTEETIK2	191992	220546	189661
A0A8I6AA77	A0A8I6AA77	A0A8I6AA77_RAT	Ttf1	Transcription termination factor 1	1	DDLGRFK	DDLGRFK	1	DDLGRFK1	7070.11	7427.88	8096.63
A0A8I6AA77	A0A8I6AA77	A0A8I6AA77_RAT	Ttf1	Transcription termination factor 1	1	DDLGRFK	DDLGRFK	2	DDLGRFK2	552186	630273	602214
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	DDLIASILSEVTPTPLEELR	DDLIASILSEVTPTPLEELR	3	DDLIASILSEVTPTPLEELR3	9679.87		
Q5HZA9	Q5HZA9	T126A_RAT	Tmem126a	Transmembrane protein 126A	1	DDLIFNIIPR	DDLIFNIIPR	2	DDLIFNIIPR2	5540.44	8360.65	8898.91
Q9Z158	Q9Z158	STX17_RAT	Stx17	Syntaxin-17	1	DDLILLK	DDLILLK	2	DDLILLK2	11874	12219.3	13049.9
Q9Z158	Q9Z158	STX17_RAT	Stx17	Syntaxin-17	1	DDLILLKR	DDLILLKR	2	DDLILLKR2		1939.88	2032.21
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	DDLLEAR	DDLLEAR	2	DDLLEAR2	264101	296945	256062
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	DDLLLTDFEGALK	DDLLLTDFEGALK	2	DDLLLTDFEGALK2	119235	137059	146603
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	DDLLLTDFEGALK	DDLLLTDFEGALK	3	DDLLLTDFEGALK3	1536.85	1617.59	193.293
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	DDLLQEYTEQR	DDLLQEYTEQR	2	DDLLQEYTEQR2	48870.4	46523.5	44958
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	DDLMGVEDTAK	DDLMGVEDTAK	2	DDLMGVEDTAK2	25723.2	35498.8	25892.8
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	DDLMSVVVFK	DDLMSVVVFK	2	DDLMSVVVFK2	4651.84	8526.55	5399.1
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	DDLNSQLQESLR	DDLNSQLQESLR	2	DDLNSQLQESLR2	13482.3	9839.4	10472.2
A0A8I6B124	A0A8I6B124	A0A8I6B124_RAT	Zswim8	Zinc finger, SWIM-type containing 8	1	DDLPSTDDSGSGLHK	DDLPSTDDSGSGLHK	3	DDLPSTDDSGSGLHK3	7011.35	9317.46	
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	DDLRDMFCK	DDLRDMFC(UniMod:4)K	3	DDLRDMFC(UniMod:4)K3	12220.6	15734.9	18662.8
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	DDLSGADIK	DDLSGADIK	1	DDLSGADIK1	2596.8	3304.11	1499.31
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	DDLSGADIK	DDLSGADIK	2	DDLSGADIK2	185001	168875	175445
B0BMY7	B0BMY7	B0BMY7_RAT	Twf2	Twinfilin actin-binding protein 2	1	DDLSLAGYQK	DDLSLAGYQK	2	DDLSLAGYQK2	34611.9	19581.6	34104.4
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	DDLSSIQTLGTK	DDLSSIQTLGTK	2	DDLSSIQTLGTK2	6.44136e+06	6.19077e+06	86377.9
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	DDLSSIQTLGTK	DDLSSIQTLGTK	3	DDLSSIQTLGTK3	15305.4	11160.1	12097
D3ZLM5	D3ZLM5	D3ZLM5_RAT	Nhlrc2	NHL repeat containing 2	1	DDLVYQYLQK	DDLVYQYLQK	2	DDLVYQYLQK2	16915.3	14056.8	6872.78
P07340	P07340	AT1B1_RAT	Atp1b1	Sodium/potassium-transporting ATPase subunit beta-1	1	DDMIFEDCGSMPSEPK	DDMIFEDC(UniMod:4)GSMPSEPK	2	DDMIFEDC(UniMod:4)GSMPSEPK2	3247.17		3311.87
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	DDMMTPISVGK	DDMMTPISVGK	2	DDMMTPISVGK2	47017.4	54974.1	49645.7
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	DDMMTPISVGKK	DDMMTPISVGKK	3	DDMMTPISVGKK3	5299.86	6675.19	8798.68
P15127	P15127	INSR_RAT	Insr	Insulin receptor	1	DDNEECGDVCPGTAK	DDNEEC(UniMod:4)GDVC(UniMod:4)PGTAK	2	DDNEEC(UniMod:4)GDVC(UniMod:4)PGTAK2	6203.45	1777.69	2799.26
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	DDNEYWLR	DDNEYWLR	2	DDNEYWLR2	3.80293e+06	4.09978e+06	4.6184e+06
P00507	P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	1	DDNGKPYVLPSVR	DDNGKPYVLPSVR	2	DDNGKPYVLPSVR2	20550.4	14990.9	28224.7
P00507	P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	1	DDNGKPYVLPSVR	DDNGKPYVLPSVR	3	DDNGKPYVLPSVR3	282529	279363	313347
P09117	P09117	ALDOC_RAT	Aldoc	Fructose-bisphosphate aldolase C	1	DDNGVPFVR	DDNGVPFVR	2	DDNGVPFVR2	11591	8479.29	13436.2
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	DDNISALTNCITQLNR	DDNISALTNC(UniMod:4)ITQLNR	2	DDNISALTNC(UniMod:4)ITQLNR2		1005.1	1403.24
Q8R492	Q8R492	Q8R492_RAT	Fap	Fibroblast activation protein, alpha	1	DDNLEHYK	DDNLEHYK	2	DDNLEHYK2	1693.41	3296.22	797.375
Q63396	Q63396	TCP4_RAT	Sub1	Activated RNA polymerase II transcriptional coactivator p15	1	DDNMFQIGK	DDNMFQIGK	2	DDNMFQIGK2	14297	6996.47	8582.17
D3ZE26	D3ZH14;D3ZE26	D3ZE26_RAT	Tmcc2	Transmembrane and coiled-coil domain family 2	0	DDNVAEYLK	DDNVAEYLK	2	DDNVAEYLK2	56492.3	42266	51922.6
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	DDPELMLGR	DDPELMLGR	2	DDPELMLGR2	30164.6	45349.7	43440.7
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	DDPENDNSELPTAK	DDPENDNSELPTAK	2	DDPENDNSELPTAK2	49416.1	35682.1	50144.7
Q6TA25	Q6TA25	FGOP2_RAT	Fgfr1op2	FGFR1 oncogene partner 2 homolog	1	DDPGIIMK	DDPGIIMK	2	DDPGIIMK2	33886.4	17067.1	33702.7
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	DDPIISTHLAK	DDPIISTHLAK	2	DDPIISTHLAK2	17058.6	12960	10406.4
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	DDPIISTHLAK	DDPIISTHLAK	3	DDPIISTHLAK3	3567.5	1982.97	
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	DDPLEFK	DDPLEFK	1	DDPLEFK1	39914.7	41013.9	43995.5
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	DDPLEFK	DDPLEFK	2	DDPLEFK2	602832	577731	671685
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	DDPLGEVSVK	DDPLGEVSVK	2	DDPLGEVSVK2	89693.2	126349	119601
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	DDPLTNLNTAFDVAER	DDPLTNLNTAFDVAER	2	DDPLTNLNTAFDVAER2	2.66383e+06	2.9745e+06	2.87964e+06
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	DDPLTNLNTAFDVAER	DDPLTNLNTAFDVAER	3	DDPLTNLNTAFDVAER3	633636	685586	718914
P22062	P22062	PIMT_RAT	Pcmt1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase	1	DDPMLLSSGR	DDPMLLSSGR	2	DDPMLLSSGR2	46544.6	49194	55596
Q6PEC4	Q6PEC4	SKP1_RAT	Skp1	S-phase kinase-associated protein 1	1	DDPPPPEDDENKEK	DDPPPPEDDENKEK	2	DDPPPPEDDENKEK2	189246		128246
Q6PEC4	Q6PEC4	SKP1_RAT	Skp1	S-phase kinase-associated protein 1	1	DDPPPPEDDENKEK	DDPPPPEDDENKEK	3	DDPPPPEDDENKEK3			90815.2
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	DDPPSLGEDTKPPGK	DDPPSLGEDTKPPGK	3	DDPPSLGEDTKPPGK3	80174.5	59996.8	69251.5
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	DDPPYTGPVVLDPMDSTYLEALGIK	DDPPYTGPVVLDPMDSTYLEALGIK	3	DDPPYTGPVVLDPMDSTYLEALGIK3	833.922	1993.46	2991.57
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	DDPQTHYYVVAVVK	DDPQTHYYVVAVVK	2	DDPQTHYYVVAVVK2	2975.34	2952.92	
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	DDPQTHYYVVAVVK	DDPQTHYYVVAVVK	3	DDPQTHYYVVAVVK3	143355	127161	134848
P21531	P21531	RL3_RAT	Rpl3	Large ribosomal subunit protein uL3	1	DDPSKPVHLTAFLGYK	DDPSKPVHLTAFLGYK	3	DDPSKPVHLTAFLGYK3	12061.8	14488.7	15203.9
Q8CFN2	Q8CFN2	CDC42_RAT	Cdc42	Cell division control protein 42 homolog	1	DDPSTIEK	DDPSTIEK	1	DDPSTIEK1	23266.5	21680.1	27160.4
Q8CFN2	Q8CFN2	CDC42_RAT	Cdc42	Cell division control protein 42 homolog	1	DDPSTIEK	DDPSTIEK	2	DDPSTIEK2	596468	553397	529728
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	DDPVTNLNNAFEVAEK	DDPVTNLNNAFEVAEK	2	DDPVTNLNNAFEVAEK2	144429	170414	136066
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	DDPVTNLNNAFEVAEK	DDPVTNLNNAFEVAEK	3	DDPVTNLNNAFEVAEK3	68850.1	82475.3	106205
P70645	P70645	BLMH_RAT	Blmh	Bleomycin hydrolase	1	DDQEGAFVK	DDQEGAFVK	2	DDQEGAFVK2	28080.8	26761.4	22874.7
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	DDQGPIR	DDQGPIR	2	DDQGPIR2	32575.8	49740.3	32138.1
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	DDQHFTVTGLHK	DDQHFTVTGLHK	3	DDQHFTVTGLHK3	10490.5	9388.74	8711.34
P62870	P62870;A0A8I6GJ22;A0A8I5ZTT3	ELOB_RAT	Elob	Elongin-B	0	DDQLLDDGK	DDQLLDDGK	2	DDQLLDDGK2	235069	217302	211954
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	DDQPSSGAVDNKEPIPR	DDQPSSGAVDNKEPIPR	2	DDQPSSGAVDNKEPIPR2	5251.42	5212.81	5846.7
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	DDQPSSGAVDNKEPIPR	DDQPSSGAVDNKEPIPR	3	DDQPSSGAVDNKEPIPR3	156855	165078	173589
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	DDQQSLYR	DDQQSLYR	2	DDQQSLYR2	45651.9	45041.2	50619.6
F1M9Z5	F1M9Z5	F1M9Z5_RAT	Cd300le	Cd300 molecule-like family member E	1	DDQTNFIFTVTMEDLR	DDQTNFIFTVTMEDLR	2	DDQTNFIFTVTMEDLR2	7527.47	6755.89	
F1M9Z5	F1M9Z5	F1M9Z5_RAT	Cd300le	Cd300 molecule-like family member E	1	DDQTNFIFTVTMEDLR	DDQTNFIFTVTMEDLR	3	DDQTNFIFTVTMEDLR3	7549.68	4560.23	974.376
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	DDQVTVIGAGVTLHEALAAAEMLK	DDQVTVIGAGVTLHEALAAAEMLK	3	DDQVTVIGAGVTLHEALAAAEMLK3	21866.8	11347.7	13603.8
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	DDQVTVIGAGVTLHEALAAAEMLKK	DDQVTVIGAGVTLHEALAAAEMLKK	3	DDQVTVIGAGVTLHEALAAAEMLKK3	8060.05	3502.33	4437.5
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	DDQVTVIGAGVTLHEALAAAEMLKK	DDQVTVIGAGVTLHEALAAAEMLKK	4	DDQVTVIGAGVTLHEALAAAEMLKK4	12628.3	11668.3	10086
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	DDQYVPQCDDLGHFIPLQCHGK	DDQYVPQC(UniMod:4)DDLGHFIPLQC(UniMod:4)HGK	3	DDQYVPQC(UniMod:4)DDLGHFIPLQC(UniMod:4)HGK3	4397.22	4815.02	4391.91
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	DDQYVPQCDDLGHFIPLQCHGK	DDQYVPQC(UniMod:4)DDLGHFIPLQC(UniMod:4)HGK	4	DDQYVPQC(UniMod:4)DDLGHFIPLQC(UniMod:4)HGK4	10631.6	8441.55	11264.5
P62944	P52303;P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	DDREAQSICER	DDREAQSIC(UniMod:4)ER	2	DDREAQSIC(UniMod:4)ER2	745.273	2066.2	
P62944	P52303;P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	DDREAQSICER	DDREAQSIC(UniMod:4)ER	3	DDREAQSIC(UniMod:4)ER3	78477.1	80524.9	114399
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	DDREDLVYQAK	DDREDLVYQAK	3	DDREDLVYQAK3	7656.53	9758.75	9656.24
B2RYD0	B2RYD0	B2RYD0_RAT	Ube2g2	Ubiquitin-conjugating enzyme E2G 2	1	DDREQFYK	DDREQFYK	2	DDREQFYK2	6639.29	2736.81	4210.64
P36953	P36953	AFAM_RAT	Afm	Afamin	1	DDRPEDLSLR	DDRPEDLSLR	2	DDRPEDLSLR2	12358.1	12356.7	4738.19
P36953	P36953	AFAM_RAT	Afm	Afamin	1	DDRPEDLSLR	DDRPEDLSLR	3	DDRPEDLSLR3	77299.7	106696	99324.4
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	DDRTEERDPPR	DDRTEERDPPR	2	DDRTEERDPPR2			2432.13
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	DDRTEERDPPR	DDRTEERDPPR	3	DDRTEERDPPR3			37741.4
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	DDRYFLSGSLDGK	DDRYFLSGSLDGK	2	DDRYFLSGSLDGK2	11594.1	4968.63	4695.93
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	DDRYFLSGSLDGK	DDRYFLSGSLDGK	3	DDRYFLSGSLDGK3	79403.1	103902	76878.2
F1LUU1	F1LUU1	F1LUU1_RAT	Itga11	Integrin subunit alpha 11	1	DDSDNSIECVNEER	DDSDNSIEC(UniMod:4)VNEER	2	DDSDNSIEC(UniMod:4)VNEER2	5751	4855.67	3855.77
Q5FVM3	Q5FVM3	RETR1_RAT	Retreg1	Reticulophagy regulator 1	1	DDSEIDFSALCPK	DDSEIDFSALC(UniMod:4)PK	2	DDSEIDFSALC(UniMod:4)PK2	41127.9	48803.3	38162.3
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	DDSELEGQVISCLK	DDSELEGQVISC(UniMod:4)LK	2	DDSELEGQVISC(UniMod:4)LK2	15694.2	22093	16841.7
Q4V884	Q4V884	Q4V884_RAT	Cdc16	CDC16 cell division cycle 16 homolog (S. cerevisiae)	1	DDSGSKDPSSDWEMSQSSIK	DDSGSKDPSSDWEMSQSSIK	3	DDSGSKDPSSDWEMSQSSIK3	11064.5	13486.7	12919.3
E9PU10	E9PU10	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	1	DDSIIAR	DDSIIAR	2	DDSIIAR2	156325	137385	147523
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	DDSIPVNR	DDSIPVNR	2	DDSIPVNR2	80110.9	83798.7	79578.6
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	DDSLDLSPQGR	DDSLDLSPQGR	2	DDSLDLSPQGR2	7341.4	10024.8	11505.5
Q6AY41	Q6AY41	CC50A_RAT	Tmem30a	Cell cycle control protein 50A	1	DDSQLNGDPSALLNPSK	DDSQLNGDPSALLNPSK	2	DDSQLNGDPSALLNPSK2	9799.61	5923.49	12212.2
A0A8I5ZLW9	A0A8I5ZLW9	A0A8I5ZLW9_RAT	ENSRNOG00000063672	Ig-like domain-containing protein	1	DDSQSMVYLQMDNLK	DDSQSMVYLQMDNLK	2	DDSQSMVYLQMDNLK2	19174.5	15657.1	15379.4
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	DDSSLSMSK	DDSSLSMSK	2	DDSSLSMSK2	12478.1	9662.31	11958
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	DDSSNFHEDFVVAATDLR	DDSSNFHEDFVVAATDLR	3	DDSSNFHEDFVVAATDLR3	16792.8	14110	16840.8
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	DDSTDFKK	DDSTDFKK	2	DDSTDFKK2	9959.3	10747.3	11226.2
P0C0A2	P0C0A2	VPS36_RAT	Vps36	Vacuolar protein-sorting-associated protein 36	1	DDSVEGLR	DDSVEGLR	2	DDSVEGLR2	7018.54	5892.35	6649.75
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	DDSVKPNMTLK	DDSVKPNMTLK	3	DDSVKPNMTLK3	50791.3	44088.9	40960.8
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	DDSWKDGCY	DDSWKDGC(UniMod:4)Y	2	DDSWKDGC(UniMod:4)Y2	6235.9	4349.46	
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	DDTAAYLPTK	DDTAAYLPTK	2	DDTAAYLPTK2	8306.79	18736.1	12136.4
P35565	P35565	CALX_RAT	Canx	Calnexin	1	DDTDDEIAK	DDTDDEIAK	2	DDTDDEIAK2	213698	219086	163714
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	DDTDLGALAAEIEGAGAAK	DDTDLGALAAEIEGAGAAK	2	DDTDLGALAAEIEGAGAAK2	15212	14550.1	20360
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	DDTDLGALAAEIEGAGAAK	DDTDLGALAAEIEGAGAAK	3	DDTDLGALAAEIEGAGAAK3	10271.1	7034.09	4052.78
D3ZBP4	D3ZBP4;D3ZGN7	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	0	DDTHYFVMTAK	DDTHYFVMTAK	3	DDTHYFVMTAK3	13421.8	11095.7	7741.91
A0A0G2KA92	A0A0G2KA92	A0A0G2KA92_RAT	Chd2	DNA helicase	1	DDTLGGK	DDTLGGK	1	DDTLGGK1			11915.3
B5DF45	B5DF45	TRAF6_RAT	Traf6	TNF receptor-associated factor 6	1	DDTLLVR	DDTLLVR	2	DDTLLVR2	15099	4676.28	5574.88
B2RYS2	F7FFF0;B2RYS2	B2RYS2_RAT	Uqcrb	Cytochrome b-c1 complex subunit 7	0	DDTMHETEDVK	DDTMHETEDVK	2	DDTMHETEDVK2	17297.1	14823.9	15958.1
B2RYS2	F7FFF0;B2RYS2	B2RYS2_RAT	Uqcrb	Cytochrome b-c1 complex subunit 7	0	DDTMHETEDVK	DDTMHETEDVK	3	DDTMHETEDVK3	54870.9	60016	68659.7
B2RYS2	F7FFF0;B2RYS2	B2RYS2_RAT	Uqcrb	Cytochrome b-c1 complex subunit 7	0	DDTMHETEDVKEAIR	DDTMHETEDVKEAIR	3	DDTMHETEDVKEAIR3	23157.3	8075.6	20178.4
B2RYS2	F7FFF0;B2RYS2	B2RYS2_RAT	Uqcrb	Cytochrome b-c1 complex subunit 7	0	DDTMHETEDVKEAIR	DDTMHETEDVKEAIR	4	DDTMHETEDVKEAIR4	3877.47	6833.49	
A0A8I6GKJ7	A0A8I6GKJ7	A0A8I6GKJ7_RAT	Gm56451	Predicted gene, 56451	1	DDTPELDSLGLASPPK	DDTPELDSLGLASPPK	2	DDTPELDSLGLASPPK2	4651.44	5039.67	10522.6
F1LWD0	F1LWD0	F1LWD0_RAT	AABR07065782.1	Ig-like domain-containing protein	1	DDTQNVLYLQMNTLR	DDTQNVLYLQMNTLR	2	DDTQNVLYLQMNTLR2	43628.5	54355.9	50837.4
F1LWD0	F1LWD0	F1LWD0_RAT	AABR07065782.1	Ig-like domain-containing protein	1	DDTQNVLYLQMNTLR	DDTQNVLYLQMNTLR	3	DDTQNVLYLQMNTLR3	19772.9	14226.1	20487.8
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	DDTSFVFTLTDKDTGVTR	DDTSFVFTLTDKDTGVTR	3	DDTSFVFTLTDKDTGVTR3	12417.7	12172.4	2700.43
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	DDTVATLSER	DDTVATLSER	2	DDTVATLSER2	11479.6	11411	4684.46
Q01460	Q01460	DIAC_RAT	Ctbs	Di-N-acetylchitobiase	1	DDVCAIAK	DDVC(UniMod:4)AIAK	2	DDVC(UniMod:4)AIAK2	8210.62	9864.23	11317.4
Q9JMB3	Q9JMB3	Q9JMB3_RAT	Epb41l3	Erythrocyte membrane protein band 4.1-like 3	1	DDVDATESAPADR	DDVDATESAPADR	2	DDVDATESAPADR2	2193.76	2818.1	4612.33
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	DDVFGYPQQFEDKPPLSK	DDVFGYPQQFEDKPPLSK	3	DDVFGYPQQFEDKPPLSK3	176286	184173	141232
P15473	P15473	IBP3_RAT	Igfbp3	Insulin-like growth factor-binding protein 3	1	DDVHCLSVQSQ	DDVHC(UniMod:4)LSVQSQ	2	DDVHC(UniMod:4)LSVQSQ2	29182.6	27183.9	21741.3
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	DDVIENAPTAHTEEYSGEEK	DDVIENAPTAHTEEYSGEEK	3	DDVIENAPTAHTEEYSGEEK3	9588.32	5367.9	11859.6
Q5XIE8	Q5XIE8	ITM2B_RAT	Itm2b	Integral membrane protein 2B	1	DDVILSEPSADAPAAR	DDVILSEPSADAPAAR	2	DDVILSEPSADAPAAR2	128879	129060	130613
Q5XIE8	Q5XIE8	ITM2B_RAT	Itm2b	Integral membrane protein 2B	1	DDVILSEPSADAPAAR	DDVILSEPSADAPAAR	3	DDVILSEPSADAPAAR3	6203.37	6709.41	15281.5
A0A0G2JTJ9	A0A0G2JTJ9	A0A0G2JTJ9_RAT	Tfcp2	Transcription factor CP2	1	DDVIQICGPADGIR	DDVIQIC(UniMod:4)GPADGIR	2	DDVIQIC(UniMod:4)GPADGIR2	4192.67	3517.19	2009.09
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	DDVIVTASNFSSER	DDVIVTASNFSSER	2	DDVIVTASNFSSER2	24050.3	30221.1	32434.5
F1M3G7	F1M3G7	AKP13_RAT	Akap13	A-kinase anchor protein 13	1	DDVLSLVSSQK	DDVLSLVSSQK	2	DDVLSLVSSQK2	5984.85	7549.78	7535.78
A0A8I6A822	A0A8I6A822	A0A8I6A822_RAT	Tm9sf3	Transmembrane 9 superfamily member	1	DDVMPGTYCEIDLDK	DDVMPGTYC(UniMod:4)EIDLDK	2	DDVMPGTYC(UniMod:4)EIDLDK2	24277	23498.5	34543.7
A0A8I6A822	A0A8I6A822	A0A8I6A822_RAT	Tm9sf3	Transmembrane 9 superfamily member	1	DDVMPGTYCEIDLDKEK	DDVMPGTYC(UniMod:4)EIDLDKEK	3	DDVMPGTYC(UniMod:4)EIDLDKEK3	184619	188013	219824
A0A8I6A822	A0A8I6A822	A0A8I6A822_RAT	Tm9sf3	Transmembrane 9 superfamily member	1	DDVMPGTYCEIDLDKEKR	DDVMPGTYC(UniMod:4)EIDLDKEKR	3	DDVMPGTYC(UniMod:4)EIDLDKEKR3	43406.3	41340.4	26844.1
A0A8I6A822	A0A8I6A822	A0A8I6A822_RAT	Tm9sf3	Transmembrane 9 superfamily member	1	DDVMPGTYCEIDLDKEKR	DDVMPGTYC(UniMod:4)EIDLDKEKR	4	DDVMPGTYC(UniMod:4)EIDLDKEKR4	32759.2	32124.3	9916.09
Q04589	Q04589	FGFR1_RAT	Fgfr1	Fibroblast growth factor receptor 1	1	DDVQSINWLR	DDVQSINWLR	2	DDVQSINWLR2	6053.74	7345.28	4164.07
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	DDVTMETIMGSLPDVQK	DDVTMETIMGSLPDVQK	2	DDVTMETIMGSLPDVQK2	203679	191342	220529
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	DDVTMETIMGSLPDVQK	DDVTMETIMGSLPDVQK	3	DDVTMETIMGSLPDVQK3	42193.9	45117.5	43894.5
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	DDVVLPALHFHQGDSK	DDVVLPALHFHQGDSK	2	DDVVLPALHFHQGDSK2	5897.8	7086.83	3436.17
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	DDVVLPALHFHQGDSK	DDVVLPALHFHQGDSK	3	DDVVLPALHFHQGDSK3	36317.1	56787.1	52194
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	DDVVLPALHFHQGDSK	DDVVLPALHFHQGDSK	4	DDVVLPALHFHQGDSK4	12190.9	11601.2	17497.7
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	DDWLEWLR	DDWLEWLR	2	DDWLEWLR2	7570.93	6757.36	6692.96
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	DDYFVSGAGLPGR	DDYFVSGAGLPGR	2	DDYFVSGAGLPGR2	1.02998e+06	1.20981e+06	1.1377e+06
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	DDYFVSGAGLPGR	DDYFVSGAGLPGR	3	DDYFVSGAGLPGR3	18456.6	22529.5	18738.4
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	DDYGFPGSQK	DDYGFPGSQK	2	DDYGFPGSQK2	10663.2	17995.1	19115.4
M0R6J0	M0R6J0	M0R6J0_RAT	Mrpl39	Mitochondrial ribosomal protein L39	1	DDYVVSLVR	DDYVVSLVR	2	DDYVVSLVR2	4524.08	5402.01	5444.61
P30009	P30009	MARCS_RAT	Marcks	Myristoylated alanine-rich C-kinase substrate	1	DEAAAAPEPGAATADK	DEAAAAPEPGAATADK	2	DEAAAAPEPGAATADK2	4952.74	7208.33	4225.87
Q63798	Q63798	PSME2_RAT	Psme2	Proteasome activator complex subunit 2	1	DEAAYGALR	DEAAYGALR	2	DEAAYGALR2	66436.6	52776.5	55034.4
B2GV06	B2GV06	SCOT1_RAT	Oxct1	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial	1	DEADADLINAGK	DEADADLINAGK	2	DEADADLINAGK2	41651.7	46926.7	42918.4
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	DEADFRDK	DEADFRDK	2	DEADFRDK2	164554	132780	147057
Q6IG01	Q6IG01	K2C1B_RAT	Krt77	Keratin, type II cytoskeletal 1b	1	DEAEALYQTK	DEAEALYQTK	2	DEAEALYQTK2	16032.8	12475.8	17088.9
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	DEAFGCYYQEK	DEAFGC(UniMod:4)YYQEK	2	DEAFGC(UniMod:4)YYQEK2	20647.9	21235.3	24964.3
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	DEAGHGDPRPEPR	DEAGHGDPRPEPR	2	DEAGHGDPRPEPR2			11674.6
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	DEAGHGDPRPEPR	DEAGHGDPRPEPR	3	DEAGHGDPRPEPR3			66613
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	DEAGHGDPRPEPRPTQSVQSR	DEAGHGDPRPEPRPTQSVQSR	4	DEAGHGDPRPEPRPTQSVQSR4	27109.4	24964	45583.1
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	DEALEDEDSK	DEALEDEDSK	2	DEALEDEDSK2	193202	189052	176093
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	DEALEDEDSKK	DEALEDEDSKK	2	DEALEDEDSKK2	16125.1	15417.9	16580.5
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	DEALEDEDSKK	DEALEDEDSKK	3	DEALEDEDSKK3	18733.1	20969.8	21645.4
F7F067	F7F067	F7F067_RAT	Actr1b	Actin related protein 1B	1	DEALETEK	DEALETEK	2	DEALETEK2	65668	53428.7	105710
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	DEALQEEK	DEALQEEK	2	DEALQEEK2	39096.4	36028.8	38637.2
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	DEAQVCAIIER	DEAQVC(UniMod:4)AIIER	2	DEAQVC(UniMod:4)AIIER2	29598.3	43655.7	22969.1
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	DEASVYK	DEASVYK	2	DEASVYK2	39636.9	49014.4	47961
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	DECCFDANQPEGK	DEC(UniMod:4)C(UniMod:4)FDANQPEGK	2	DEC(UniMod:4)C(UniMod:4)FDANQPEGK2	104923	98042.1	134985
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	DECCFDANQPEGKK	DEC(UniMod:4)C(UniMod:4)FDANQPEGKK	3	DEC(UniMod:4)C(UniMod:4)FDANQPEGKK3	7322.86	11807.2	10462.3
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	DECFAHLAPYPNYDR	DEC(UniMod:4)FAHLAPYPNYDR	2	DEC(UniMod:4)FAHLAPYPNYDR2	24555.2	19810.1	15435
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	DECFAHLAPYPNYDR	DEC(UniMod:4)FAHLAPYPNYDR	3	DEC(UniMod:4)FAHLAPYPNYDR3	466861	275049	271057
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	DECFAHLAPYPNYDRDLLTVDLSR	DEC(UniMod:4)FAHLAPYPNYDRDLLTVDLSR	3	DEC(UniMod:4)FAHLAPYPNYDRDLLTVDLSR3	92579.9	75416.5	55657.1
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	DECFAHLAPYPNYDRDLLTVDLSR	DEC(UniMod:4)FAHLAPYPNYDRDLLTVDLSR	4	DEC(UniMod:4)FAHLAPYPNYDRDLLTVDLSR4	126357	101851	97547.5
Q9ES54	Q9ES54	NPL4_RAT	Nploc4	Nuclear protein localization protein 4 homolog	1	DECLLPCK	DEC(UniMod:4)LLPC(UniMod:4)K	2	DEC(UniMod:4)LLPC(UniMod:4)K2	15179.7	18910.2	7614.72
P28073	P28073;A0A0G2JSL0	PSB6_RAT	Psmb6	Proteasome subunit beta type-6	0	DECLQFTANALALAMER	DEC(UniMod:4)LQFTANALALAMER	2	DEC(UniMod:4)LQFTANALALAMER2	63293.9	49127.2	86050.6
P28073	P28073;A0A0G2JSL0	PSB6_RAT	Psmb6	Proteasome subunit beta type-6	0	DECLQFTANALALAMER	DEC(UniMod:4)LQFTANALALAMER	3	DEC(UniMod:4)LQFTANALALAMER3	85054.3	76699.4	72609.3
Q4QQT4	Q4QQT4;Q5XI34	2AAB_RAT	Ppp2r1b	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	0	DECPEVR	DEC(UniMod:4)PEVR	2	DEC(UniMod:4)PEVR2	166906	182926	170672
A0A0G2K1L5	A0A0G2K1L5	A0A0G2K1L5_RAT	Reep2	Receptor expression-enhancing protein	1	DEDALPLQGPDGR	DEDALPLQGPDGR	2	DEDALPLQGPDGR2	6629.13		
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	DEDECAEGK	DEDEC(UniMod:4)AEGK	2	DEDEC(UniMod:4)AEGK2			4634.1
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	DEDGKPVR	DEDGKPVR	2	DEDGKPVR2			7962.65
P24473	P24473	GSTK1_RAT	Gstk1	Glutathione S-transferase kappa 1	1	DEDITESQNILSAAEK	DEDITESQNILSAAEK	2	DEDITESQNILSAAEK2	19147.7	13410.8	18092.6
D3Z8X6	D3Z8X6	D3Z8X6_RAT	Dtx3l	E3 ubiquitin-protein ligase	1	DEDNCVICMDTIR	DEDNC(UniMod:4)VIC(UniMod:4)MDTIR	2	DEDNC(UniMod:4)VIC(UniMod:4)MDTIR2	2380.31	3885.23	7706.04
P62944	P52303;P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	DEDPYVR	DEDPYVR	2	DEDPYVR2	68994	55435.8	66750.1
P62944	P52303;P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	DEDPYVRK	DEDPYVRK	2	DEDPYVRK2	6806.54	5327.85	10216.6
P97615	P97615	THIOM_RAT	Txn2	Thioredoxin, mitochondrial	1	DEDQLEAFLK	DEDQLEAFLK	2	DEDQLEAFLK2	3662.69	3762.59	
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DEDSAEALLK	DEDSAEALLK	2	DEDSAEALLK2	303294	305829	302709
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DEDSAEALLKK	DEDSAEALLKK	2	DEDSAEALLKK2	13370.4	20660.6	18752.6
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DEDSAEALLKK	DEDSAEALLKK	3	DEDSAEALLKK3	162068	235997	233614
Q64232	Q64232	TECR_RAT	Tecr	Very-long-chain enoyl-CoA reductase	1	DEDVLQK	DEDVLQK	2	DEDVLQK2	41478.4	49388.1	52633.8
Q64232	Q64232	TECR_RAT	Tecr	Very-long-chain enoyl-CoA reductase	1	DEDVLQKLPVGTTATLYFR	DEDVLQKLPVGTTATLYFR	3	DEDVLQKLPVGTTATLYFR3		5630.02	4275.24
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	DEDYLGK	DEDYLGK	2	DEDYLGK2	23275.3	38767.1	42454.2
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	DEEDSKPQGCMYLPGSTVK	DEEDSKPQGC(UniMod:4)MYLPGSTVK	3	DEEDSKPQGC(UniMod:4)MYLPGSTVK3	13326.1	13527.7	23279.1
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	DEEETVTTK	DEEETVTTK	2	DEEETVTTK2		150212	
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	DEEFPEQK	DEEFPEQK	2	DEEFPEQK2	241967	164387	228547
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	DEEGAIVMLK	DEEGAIVMLK	2	DEEGAIVMLK2	16881.2	21753.4	23174.4
P35565	P35565	CALX_RAT	Canx	Calnexin	1	DEEGKEEEK	DEEGKEEEK	2	DEEGKEEEK2			3353.74
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	DEEGTGVVHQAPYFGADDHR	DEEGTGVVHQAPYFGADDHR	3	DEEGTGVVHQAPYFGADDHR3	10805.8	13822.8	9819.75
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	DEEGTGVVHQAPYFGADDHR	DEEGTGVVHQAPYFGADDHR	4	DEEGTGVVHQAPYFGADDHR4	23174.9	27510.2	36478.5
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	DEEINQQSQLVEK	DEEINQQSQLVEK	2	DEEINQQSQLVEK2	10092.5	4344.06	1845.34
D3ZFD0	D3ZFD0;A0A8I6AFD4	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	0	DEEIQQLR	DEEIQQLR	2	DEEIQQLR2	14866.6	16069.8	22161.3
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	DEEISAAAIK	DEEISAAAIK	2	DEEISAAAIK2	95381.3	89647.2	94964.4
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	DEELFPLQVVMK	DEELFPLQVVMK	2	DEELFPLQVVMK2	22499.9	31310.1	17167.5
F1M784	F1M784	F1M784_RAT	Pik3ap1	Phosphoinositide-3-kinase adaptor protein 1	1	DEELPTLLHFAAK	DEELPTLLHFAAK	3	DEELPTLLHFAAK3	4573.11	4491.89	8341.88
P05544	Q63556;A0A0G2JSK1;P05544;P09005;P05545	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	DEELSCSVLELK	DEELSC(UniMod:4)SVLELK	2	DEELSC(UniMod:4)SVLELK2	1.1958e+06	1.03377e+06	1.03377e+06
P05544	Q63556;A0A0G2JSK1;P05544;P09005;P05545	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	DEELSCSVLELK	DEELSC(UniMod:4)SVLELK	3	DEELSC(UniMod:4)SVLELK3	11369.4	13971.6	9253.43
Q6IRE4	Q6IRE4	TS101_RAT	Tsg101	Tumor susceptibility gene 101 protein	1	DEELSSALEK	DEELSSALEK	2	DEELSSALEK2	33049.3	29828.8	31006.9
A0JPJ7	A0JPJ7	OLA1_RAT	Ola1	Obg-like ATPase 1	1	DEEMIGPIIDK	DEEMIGPIIDK	2	DEEMIGPIIDK2	8716.92	7786.24	9352.55
A0JPJ7	A0JPJ7	OLA1_RAT	Ola1	Obg-like ATPase 1	1	DEEMIGPIIDKLEK	DEEMIGPIIDKLEK	3	DEEMIGPIIDKLEK3	6265.34		5152.45
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	DEERPCGDPPSFPHTILQGR	DEERPC(UniMod:4)GDPPSFPHTILQGR	3	DEERPC(UniMod:4)GDPPSFPHTILQGR3		2562.11	
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	DEERPCGDPPSFPHTILQGR	DEERPC(UniMod:4)GDPPSFPHTILQGR	4	DEERPC(UniMod:4)GDPPSFPHTILQGR4	67605	77563	77900.5
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	DEESAMLR	DEESAMLR	2	DEESAMLR2	109389	135076	131428
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	DEESGGGSNPLQHLEK	DEESGGGSNPLQHLEK	3	DEESGGGSNPLQHLEK3	6675.83	9833.19	6027.51
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	DEESGSGSNPFQHLEK	DEESGSGSNPFQHLEK	3	DEESGSGSNPFQHLEK3	27582.4	21105.9	18606.5
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	DEESLSLK	DEESLSLK	2	DEESLSLK2	9743.81	11798	12652.8
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	DEETNEESGR	DEETNEESGR	2	DEETNEESGR2			36708.5
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	DEETNEESGRDLK	DEETNEESGRDLK	2	DEETNEESGRDLK2		4955.66	
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	DEETNEESGRDLK	DEETNEESGRDLK	3	DEETNEESGRDLK3	31215.1	31639.8	
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	DEEVVQCLSEGWSSQPSCR	DEEVVQC(UniMod:4)LSEGWSSQPSC(UniMod:4)R	3	DEEVVQC(UniMod:4)LSEGWSSQPSC(UniMod:4)R3	29868.2	34425.6	26850.7
Q5FWU3	Q5FWU3	ATG9A_RAT	Atg9a	Autophagy-related protein 9A	1	DEFAQLFQYK	DEFAQLFQYK	2	DEFAQLFQYK2	995.271		3329.6
Q5U300	Q5U300;A0A8I5ZVX0;A0A8I6A544	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	0	DEFEGLFK	DEFEGLFK	2	DEFEGLFK2	238284	165165	184879
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	DEFLGQVHLK	DEFLGQVHLK	2	DEFLGQVHLK2	140225	123696	118714
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	DEFLGQVHLK	DEFLGQVHLK	3	DEFLGQVHLK3	203167	213039	212518
P09527	P09527	RAB7A_RAT	Rab7a	Ras-related protein Rab-7a	1	DEFLIQASPR	DEFLIQASPR	2	DEFLIQASPR2	84291.3	69481.1	72526.6
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	DEFNLQK	DEFNLQK	2	DEFNLQK2	145283	164241	170785
P21913	P21913	SDHB_RAT	Sdhb	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial	1	DEFTEER	DEFTEER	2	DEFTEER2	51165.4	38269.3	59712.7
Q9Z0W7	Q9Z0W7	CLIC4_RAT	Clic4	Chloride intracellular channel protein 4	1	DEFTNTCPSDK	DEFTNTC(UniMod:4)PSDK	2	DEFTNTC(UniMod:4)PSDK2	27445.1	12539.9	23051.5
Q9Z0W7	Q9Z0W7	CLIC4_RAT	Clic4	Chloride intracellular channel protein 4	1	DEFTNTCPSDKEVEIAYSDVAK	DEFTNTC(UniMod:4)PSDKEVEIAYSDVAK	3	DEFTNTC(UniMod:4)PSDKEVEIAYSDVAK3	54409.1	54661.2	72176.1
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	DEGATSTLTLSPVGVEDEHSYLCTVTCQR	DEGATSTLTLSPVGVEDEHSYLC(UniMod:4)TVTC(UniMod:4)QR	4	DEGATSTLTLSPVGVEDEHSYLC(UniMod:4)TVTC(UniMod:4)QR4	7144.32	4192.54	7146.37
P01830	P01830	THY1_RAT	Thy1	Thy-1 membrane glycoprotein	1	DEGDYMCELR	DEGDYMC(UniMod:4)ELR	2	DEGDYMC(UniMod:4)ELR2	59813.6	51683.1	58440.7
A0A096MKE0	A0A096MKE0	A0A096MKE0_RAT	Asph	Aspartate-beta-hydroxylase	1	DEGLMVMDK	DEGLMVMDK	2	DEGLMVMDK2	9068.31		10845.6
P58365	P58365	CAD23_RAT	Cdh23	Cadherin-23	1	DEGLNSMFEVYLVGNNSHHFIISPTSVQGK	DEGLNSMFEVYLVGNNSHHFIISPTSVQGK	4	DEGLNSMFEVYLVGNNSHHFIISPTSVQGK4	10073.6	10459.3	
P16975	P16975	SPRC_RAT	Sparc	SPARC	1	DEGNNLLTEK	DEGNNLLTEK	2	DEGNNLLTEK2	140905	136727	122414
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	DEGTGTLR	DEGTGTLR	2	DEGTGTLR2	776782	681110	751348
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	DEGTGTLRK	DEGTGTLRK	2	DEGTGTLRK2	32596.6		5935.31
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	DEGVYTCSATNLAGESK	DEGVYTC(UniMod:4)SATNLAGESK	2	DEGVYTC(UniMod:4)SATNLAGESK2	3629.4	2322.19	1504.88
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	DEGWLAEHMLILGITNPAGK	DEGWLAEHMLILGITNPAGK	3	DEGWLAEHMLILGITNPAGK3	17317.4	9540.46	21684.5
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	DEHFDFIQSHIR	DEHFDFIQSHIR	3	DEHFDFIQSHIR3	3361.19	939.733	1009.66
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	DEHHTALSNMPK	DEHHTALSNMPK	3	DEHHTALSNMPK3	32384.3	28977.3	27719
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	DEHLDIR	DEHLDIR	2	DEHLDIR2	6368.39	6391.73	7199.23
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	DEHLQQYQEVCAQR	DEHLQQYQEVC(UniMod:4)AQR	3	DEHLQQYQEVC(UniMod:4)AQR3	13716.8	16013	17283.8
Q8K4Y7	Q8K4Y7	CANT1_RAT	Cant1	Soluble calcium-activated nucleotidase 1	1	DEHLYVGGLGK	DEHLYVGGLGK	3	DEHLYVGGLGK3	13729.4	7002.62	12139.9
A0A8I5ZWS4	D3ZB48;A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	0	DEIDVLR	DEIDVLR	2	DEIDVLR2	31840.2	37505.8	29115.1
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	DEIESAVK	DEIESAVK	2	DEIESAVK2	41413	30524.8	29149
A0A8I6A6I4	A0A8I6A6I4	A0A8I6A6I4_RAT	Atp11b	Phospholipid-transporting ATPase	1	DEIFPADLVLLSSDR	DEIFPADLVLLSSDR	2	DEIFPADLVLLSSDR2	15315.9	13062.2	10941.8
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	DEIGHILHHVNIGLK	DEIGHILHHVNIGLK	3	DEIGHILHHVNIGLK3	7785.38	8171.45	
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	DEIGHILHHVNIGLK	DEIGHILHHVNIGLK	4	DEIGHILHHVNIGLK4	2079.99	4136.55	3417.34
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	DEIITTTVPEDIMSNR	DEIITTTVPEDIMSNR	2	DEIITTTVPEDIMSNR2	163416	154642	156424
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	DEIITTTVPEDIMSNR	DEIITTTVPEDIMSNR	3	DEIITTTVPEDIMSNR3	39218	42507.8	28381
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	DEILANGGSLSHHHGVGK	DEILANGGSLSHHHGVGK	4	DEILANGGSLSHHHGVGK4	3085.93	3583.89	4083.8
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	DEILGIANNR	DEILGIANNR	2	DEILGIANNR2	607962	601610	823987
P20069	P20069	MPPA_RAT	Pmpca	Mitochondrial-processing peptidase subunit alpha	1	DEILLTLEK	DEILLTLEK	2	DEILLTLEK2	27486.7	22447.6	19539.5
P62909	D3ZVH2;P62909;A0A0G2K689	RS3_RAT	Rps3	Small ribosomal subunit protein uS3	0	DEILPTTPISEQK	DEILPTTPISEQK	2	DEILPTTPISEQK2	65587.3	58785.1	58789.2
A0A0G2QC33	A0A0G2QC33	ATG4B_RAT	Atg4b	Cysteine protease ATG4B	1	DEILSDVASR	DEILSDVASR	2	DEILSDVASR2	140375	169346	178599
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	DEINLAK	DEINLAK	1	DEINLAK1	1794.08	1495.46	1734.36
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	DEINLAK	DEINLAK	2	DEINLAK2	133883	119096	128919
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	DEIPHNDIALLK	DEIPHNDIALLK	2	DEIPHNDIALLK2	143861	114302	97975.3
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	DEIPHNDIALLK	DEIPHNDIALLK	3	DEIPHNDIALLK3	568143	399718	487173
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	DEIQISTGNALFIEK	DEIQISTGNALFIEK	2	DEIQISTGNALFIEK2	209644	129996	143353
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	DEISQLGGLLK	DEISQLGGLLK	2	DEISQLGGLLK2	9610.6	9195.84	12301.6
P36876	P56932;P36876	2ABA_RAT	Ppp2r2a	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	0	DEISVDSLDFNK	DEISVDSLDFNK	2	DEISVDSLDFNK2	10408.7	4203.9	9665.21
P36876	P56932;P36876	2ABA_RAT	Ppp2r2a	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	0	DEISVDSLDFNKK	DEISVDSLDFNKK	3	DEISVDSLDFNKK3	9735.01	14234.6	10844.9
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	DEITEWESR	DEITEWESR	2	DEITEWESR2	161130	197512	193537
A0A8I6AT07	A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	1	DEIYCICDIPVMK	DEIYC(UniMod:4)IC(UniMod:4)DIPVMK	2	DEIYC(UniMod:4)IC(UniMod:4)DIPVMK2	9695.9	5401.11	5304.88
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	DEIYIPLQDEDPK	DEIYIPLQDEDPK	2	DEIYIPLQDEDPK2	13006.2	13708.3	13063
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	DEKPVEAIK	DEKPVEAIK	2	DEKPVEAIK2	38669.5	24409.7	39382.2
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DELADEIANSSGK	DELADEIANSSGK	2	DELADEIANSSGK2	1.94146e+06	1.86155e+06	2.12492e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DELADEIANSSGK	DELADEIANSSGK	3	DELADEIANSSGK3	7504.16	15130.2	10098.5
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	DELAGTQQR	DELAGTQQR	2	DELAGTQQR2	40079	32135.5	32209.6
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	DELANTQQK	DELANTQQK	2	DELANTQQK2	46715.8	43506.9	
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	DELASTK	DELASTK	1	DELASTK1	36608.5	38856.1	29888.1
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	DELASTK	DELASTK	2	DELASTK2	1.22167e+06	1.34962e+06	
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	DELASTKK	DELASTKK	2	DELASTKK2			7788.91
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	DELEEENGSLR	DELEEENGSLR	2	DELEEENGSLR2	2285.31	2059.24	
B0BMY7	B0BMY7	B0BMY7_RAT	Twf2	Twinfilin actin-binding protein 2	1	DELFGTVK	DELFGTVK	2	DELFGTVK2	39255	26526.6	25928.5
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	DELFTDTK	DELFTDTK	2	DELFTDTK2	39210.2	25385.2	25047.6
P13084	A0A8I5ZUQ5;F7FKF2;A0A8I6A9J5;P13084	NPM_RAT	Npm1	Nucleophosmin	0	DELHIVEAEAMNYEGSPIK	DELHIVEAEAMNYEGSPIK	3	DELHIVEAEAMNYEGSPIK3	3498.76	3555.38	5530.09
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	DELIHELK	DELIHELK	2	DELIHELK2	8634.74	27315.4	56974.2
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	DELIQDAAAENNK	DELIQDAAAENNK	2	DELIQDAAAENNK2	30218.9	33522.4	34234.2
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	DELKEALDDVTLPR	DELKEALDDVTLPR	3	DELKEALDDVTLPR3	7309.37	9542.11	10208.4
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	DELLAAEHSQSK	DELLAAEHSQSK	2	DELLAAEHSQSK2	3891.98	3598.9	3100.32
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	DELLAAEHSQSK	DELLAAEHSQSK	3	DELLAAEHSQSK3	14643.8	13108.1	20822.3
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	DELLAEANVMQQLDNPYIVR	DELLAEANVMQQLDNPYIVR	3	DELLAEANVMQQLDNPYIVR3	7370.28	21111.2	22107.4
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	DELLHQMK	DELLHQMK	2	DELLHQMK2	3375.19	4065.46	6578.76
A0A8I5ZSU2	A0A8I5ZSU2	A0A8I5ZSU2_RAT	Ccm2l	CCM2 like scaffold protein	1	DELLQLLDTAR	DELLQLLDTAR	2	DELLQLLDTAR2	9595.1	7795.67	3786.41
P61023	A0A8I6AT96;P61023;A0A8I6AI64	CHP1_RAT	Chp1	Calcineurin B homologous protein 1	0	DELLQVLR	DELLQVLR	2	DELLQVLR2	5549.58	1934.65	3073.59
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	DELLSQIR	DELLSQIR	2	DELLSQIR2	809519	807164	806215
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	DELLSQIRK	DELLSQIRK	2	DELLSQIRK2	5704.03	4673.71	16295.5
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	DELQEGLSR	DELQEGLSR	2	DELQEGLSR2	5732.04	5121.28	8120.44
P08541	F1M3E3;P08541	UD2B2_RAT	Ugt2b	UDP-glucuronosyltransferase 2B2	0	DELQNHFIK	DELQNHFIK	3	DELQNHFIK3	3357.96	8703.67	8216.39
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	DELQSACLEDQAK	DELQSAC(UniMod:4)LEDQAK	2	DELQSAC(UniMod:4)LEDQAK2	9798.45	15243.2	16355.9
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	DELQVIQK	DELQVIQK	2	DELQVIQK2	21397.1	10323.9	13613.7
Q5XI81	Q5XI81	FXR1_RAT	Fxr1	RNA-binding protein FXR1	1	DELSDWSLAGEDDRETR	DELSDWSLAGEDDRETR	3	DELSDWSLAGEDDRETR3	38269.7	66257	25687.4
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	DELSFEQFHLFYK	DELSFEQFHLFYK	3	DELSFEQFHLFYK3	31607	26084.4	26846.8
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	DELSTFIR	DELSTFIR	2	DELSTFIR2	54527	47745.6	49011.5
Q6AXS5	Q6AXS5	SERB1_RAT	Serbp1	SERPINE1 mRNA-binding protein 1	1	DELTESPK	DELTESPK	2	DELTESPK2	21645.7	25873	23240
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	DELTPLHCAAR	DELTPLHC(UniMod:4)AAR	2	DELTPLHC(UniMod:4)AAR2	6204.76	1756.96	1462.03
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	DELTPLHCAAR	DELTPLHC(UniMod:4)AAR	3	DELTPLHC(UniMod:4)AAR3	12462.6	12830.2	13711.8
Q6AY97	Q6AY97	CCD91_RAT	Ccdc91	Coiled-coil domain-containing protein 91	1	DELVEYVR	DELVEYVR	2	DELVEYVR2	18396.2	13891.9	14329.3
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	DEMHDVEDELAQR	DEMHDVEDELAQR	2	DEMHDVEDELAQR2	17232.4	18504.7	15674.1
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	DEMHDVEDELAQR	DEMHDVEDELAQR	3	DEMHDVEDELAQR3	145142	161563	167410
A0A0G2KAU4	A0A0G2KAU4	A0A0G2KAU4_RAT	Rasgrp3	RAS guanyl releasing protein 3	1	DEMMAYFLR	DEMMAYFLR	2	DEMMAYFLR2	16058.4	18864.7	10488.3
Q9QZ81	Q9QZ81	AGO2_RAT	Ago2	Protein argonaute-2	1	DEMTDVTGR	DEMTDVTGR	2	DEMTDVTGR2	3001.56	2741.93	2916.85
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	DEMVATEQER	DEMVATEQER	2	DEMVATEQER2	7491.83	6437.81	4733.65
Q5FVR0	Q5FVR0	TIMD2_RAT	Timd2	T-cell immunoglobulin and mucin domain-containing protein 2	1	DEMVPTCWGR	DEMVPTC(UniMod:4)WGR	2	DEMVPTC(UniMod:4)WGR2	245706	209383	266070
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	DENAALIR	DENAALIR	2	DENAALIR2	31495.9	36046.8	42663.3
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	DENCEPVEKPENK	DENC(UniMod:4)EPVEKPENK	2	DENC(UniMod:4)EPVEKPENK2	2353.18	3877.56	2175.21
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	DENCEPVEKPENK	DENC(UniMod:4)EPVEKPENK	3	DENC(UniMod:4)EPVEKPENK3	14480.7	28829.2	
G3V7L4	G3V7L4	G3V7L4_RAT	Cdh16	Cadherin 16	1	DENDQVPQFSQAIYR	DENDQVPQFSQAIYR	3	DENDQVPQFSQAIYR3	5220.42	3224.91	2143.4
A0A0G2KB61	A0A0G2KB61	A0A0G2KB61_RAT	Ppp1r13b	Protein phosphatase 1, regulatory subunit 13B	1	DENETEWWWAR	DENETEWWWAR	2	DENETEWWWAR2	1742.37	1590.35	
Q5XIM5	Q5XIM5	CDV3_RAT	Cdv3	Protein CDV3 homolog	1	DENEWKEFEQK	DENEWKEFEQK	3	DENEWKEFEQK3	9209.19	1206.75	13973.1
Q10728	A0A8I6A6B6;Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	0	DENGALIR	DENGALIR	2	DENGALIR2	4965.08		6980.59
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	DENGKPLAYPLEIR	DENGKPLAYPLEIR	2	DENGKPLAYPLEIR2	47871.9	36782.2	41246.9
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	DENGKPLAYPLEIR	DENGKPLAYPLEIR	3	DENGKPLAYPLEIR3	444439	358379	368743
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	DENLAYYIENLFHDFK	DENLAYYIENLFHDFK	3	DENLAYYIENLFHDFK3	5406.29		
P08650	P08650	CO5_RAT	C5	Complement C5	1	DENPVSHVYLEVVSMHFSK	DENPVSHVYLEVVSMHFSK	3	DENPVSHVYLEVVSMHFSK3	77243.8	73239.3	47920
P08650	P08650	CO5_RAT	C5	Complement C5	1	DENPVSHVYLEVVSMHFSK	DENPVSHVYLEVVSMHFSK	4	DENPVSHVYLEVVSMHFSK4	75692.3	55112.5	46930.4
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	DENQLHCVK	DENQLHC(UniMod:4)VK	2	DENQLHC(UniMod:4)VK2	14476.1	11776	18049.2
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	DENQLHCVK	DENQLHC(UniMod:4)VK	3	DENQLHC(UniMod:4)VK3	93491.1	110638	89315.2
P08460	P08460	NID1_RAT	Nid1	Nidogen-1 (Fragment)	1	DENQVPAVVGFSK	DENQVPAVVGFSK	2	DENQVPAVVGFSK2	208338	212573	205180
P08460	P08460	NID1_RAT	Nid1	Nidogen-1 (Fragment)	1	DENQVPAVVGFSK	DENQVPAVVGFSK	3	DENQVPAVVGFSK3	3219.39	1984.92	
Q9JJ05	Q9JJ05	C1GLT_RAT	C1galt1	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1	1	DENTDVAENLYQK	DENTDVAENLYQK	2	DENTDVAENLYQK2	9380.68	9195.9	10078.7
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	DENYDLAMR	DENYDLAMR	2	DENYDLAMR2	14208.9	12971.7	22585.8
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	DEPAEQGELK	DEPAEQGELK	2	DEPAEQGELK2	717411	905745	789508
P54001	P54001	P4HA1_RAT	P4ha1	Prolyl 4-hydroxylase subunit alpha-1	1	DEPDAFR	DEPDAFR	2	DEPDAFR2	27858.3	19455.7	32340.1
B0BN63	B0BN63	B0BN63_RAT	Ahsa1	Activator of Hsp90 ATPase activity 1	1	DEPDTSLVALMK	DEPDTSLVALMK	2	DEPDTSLVALMK2	38278.4	36190.9	41826.6
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	DEPGAWEETFK	DEPGAWEETFK	2	DEPGAWEETFK2	1.46327e+06	1.48023e+06	1.70387e+06
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	DEPIHILNVAIK	DEPIHILNVAIK	3	DEPIHILNVAIK3	5863.48	7972.22	8466.13
O08770	O08770	GPV_RAT	Gp5	Platelet glycoprotein V	1	DEPPQCNGPESR	DEPPQC(UniMod:4)NGPESR	2	DEPPQC(UniMod:4)NGPESR2	25568.3	35661.2	40071.9
P40241	P40241	CD9_RAT	Cd9	CD9 antigen	1	DEPQRETLK	DEPQRETLK	2	DEPQRETLK2	35667	55173.4	17998.8
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	DEPSVAAMVYPFTGDHK	DEPSVAAMVYPFTGDHK	3	DEPSVAAMVYPFTGDHK3	7204.88	7679.1	6557.52
F1M842	F1M842	F1M842_RAT	Tp53bp1	Tumor protein p53 binding protein 1	1	DEPVRPDQELQQPQVQEK	DEPVRPDQELQQPQVQEK	3	DEPVRPDQELQQPQVQEK3	4294.54	6271.29	2302.73
P36372	P36372	TAP2_RAT	Tap2	Antigen peptide transporter 2	1	DEQDVYAHLVQQR	DEQDVYAHLVQQR	3	DEQDVYAHLVQQR3	33769.3	31093.6	
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	DEQEHEFYK	DEQEHEFYK	2	DEQEHEFYK2	2348.02	1834.14	6539.62
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	DEQEHEFYK	DEQEHEFYK	3	DEQEHEFYK3	1479.25		2976.22
O08839	O08839	BIN1_RAT	Bin1	Myc box-dependent-interacting protein 1	1	DEQFEQCVQNFNK	DEQFEQC(UniMod:4)VQNFNK	2	DEQFEQC(UniMod:4)VQNFNK2	3009.79		1272.64
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	DEQGAENLCIK	DEQGAENLC(UniMod:4)IK	2	DEQGAENLC(UniMod:4)IK2	9197.71	10799.6	3808.19
P06214	P06214	HEM2_RAT	Alad	Delta-aminolevulinic acid dehydratase	1	DEQGSAADSEDSPTIEAVR	DEQGSAADSEDSPTIEAVR	3	DEQGSAADSEDSPTIEAVR3	4158.6	4210.28	8573.94
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	DEQHQCSLGSLR	DEQHQC(UniMod:4)SLGSLR	3	DEQHQC(UniMod:4)SLGSLR3	36021.6	33994.9	35613.6
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	DEQIQGLMEEGEK	DEQIQGLMEEGEK	2	DEQIQGLMEEGEK2	6870.63	6839.02	10361.9
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	DEQLESLFQR	DEQLESLFQR	2	DEQLESLFQR2	143516	175912	170574
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	DEQLLHLSSELESSHNQVQSFTK	DEQLLHLSSELESSHNQVQSFTK	3	DEQLLHLSSELESSHNQVQSFTK3	5991.16	7976.86	8596.3
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	DEQLLHLSSELESSHNQVQSFTK	DEQLLHLSSELESSHNQVQSFTK	4	DEQLLHLSSELESSHNQVQSFTK4	8941.43	11438.9	5240.54
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	DEQMAVQGICADQVK	DEQMAVQGIC(UniMod:4)ADQVK	2	DEQMAVQGIC(UniMod:4)ADQVK2	2693.62	1548.28	1466.38
Q5M860	Q5M860	Q5M860_RAT	Arhgdib	Rho GDP dissociation inhibitor beta	1	DEQPQLEEGEDELDSK	DEQPQLEEGEDELDSK	2	DEQPQLEEGEDELDSK2	49617.4	41934.6	37712.2
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	DEQSAVSMLK	DEQSAVSMLK	2	DEQSAVSMLK2	271868	293308	263674
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	DEQSAVSMLKK	DEQSAVSMLKK	2	DEQSAVSMLKK2	6692.04	4120.21	5528.36
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	DEQSAVSMLKK	DEQSAVSMLKK	3	DEQSAVSMLKK3	55243.4	65930.9	83806.8
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DEQSEEK	DEQSEEK	1	DEQSEEK1	543.65	1279.14	1739.79
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DEQSEEK	DEQSEEK	2	DEQSEEK2	5640.36	5049.35	6065.39
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DEQSEEKK	DEQSEEKK	2	DEQSEEKK2	10247.5	7954.81	9771.68
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	DEQTILPLVDEALQHTTTK	DEQTILPLVDEALQHTTTK	3	DEQTILPLVDEALQHTTTK3	12105.3	11169.1	10163.3
P0DSP1	P0DSP1	SORL_RAT	Sorl1	Sortilin-related receptor	1	DEQYLFLVR	DEQYLFLVR	2	DEQYLFLVR2		2027.68	1862.68
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	DERFEQSASNFYQQQAEGHR	DERFEQSASNFYQQQAEGHR	3	DERFEQSASNFYQQQAEGHR3	423222	527910	565681
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	DERFEQSASNFYQQQAEGHR	DERFEQSASNFYQQQAEGHR	4	DERFEQSASNFYQQQAEGHR4	920905	1.27647e+06	1.22998e+06
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	DERLDGHTGCTLWTPFNK	DERLDGHTGC(UniMod:4)TLWTPFNK	4	DERLDGHTGC(UniMod:4)TLWTPFNK4	1612.17	8195.51	6064.64
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	DERNEILCGSSHLCGLLK	DERNEILC(UniMod:4)GSSHLC(UniMod:4)GLLK	4	DERNEILC(UniMod:4)GSSHLC(UniMod:4)GLLK4	8858.2	7451.84	7767.78
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	DERPWCYVVK	DERPWC(UniMod:4)YVVK	3	DERPWC(UniMod:4)YVVK3	35622.9	34905.3	
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	DESASQEESEAR	DESASQEESEAR	2	DESASQEESEAR2	111142		47026
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	DESDNLLNQAR	DESDNLLNQAR	2	DESDNLLNQAR2	16279.9	24404.2	24250.9
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	DESEFRDK	DESEFRDK	2	DESEFRDK2	26295.5	38021.6	
P21744	P21744	IBP4_RAT	Igfbp4	Insulin-like growth factor-binding protein 4	1	DESEHPNNSFNPCSAHDHR	DESEHPNNSFNPC(UniMod:4)SAHDHR	4	DESEHPNNSFNPC(UniMod:4)SAHDHR4	1670.07	2055.07	
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	DESEQTVLIGSK	DESEQTVLIGSK	2	DESEQTVLIGSK2	46805	56442.9	57416.4
Q9JJM9	Q9JJM9;Q5EB96;A0A096MJN4	SEPT5_RAT	Septin5	Septin-5	0	DESGLNRK	DESGLNRK	2	DESGLNRK2			39370.9
B5DEP5	B5DEP5	B5DEP5_RAT	Trip4	Thyroid hormone receptor interactor 4	1	DESLDGQR	DESLDGQR	2	DESLDGQR2	10283.2	12559.7	9456.35
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	DESPASWR	DESPASWR	2	DESPASWR2	123189	112141	128505
Q6IRJ7	Q6IRJ7	Q6IRJ7_RAT	Anxa7	Annexin	1	DESPSINHQMAQEDAQR	DESPSINHQMAQEDAQR	3	DESPSINHQMAQEDAQR3	9084.91	11015.7	10706.5
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	DESTNVDMSLVQR	DESTNVDMSLVQR	2	DESTNVDMSLVQR2	5439.87	7707.46	8130.27
P04646	D4A771;A0A8L2QNQ0;A0A8L2QQD7;P04646;A0A8I5ZW32;D3ZZN4;A0A8I6A5U8	RL35A_RAT	Rpl35a	Large ribosomal subunit protein eL33	0	DETEFYLGK	DETEFYLGK	2	DETEFYLGK2	49235.6	41812.6	54853.2
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	DETFTKR	DETFTKR	2	DETFTKR2	57885.7	63809.5	74758.4
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	DETGELSSADEK	DETGELSSADEK	2	DETGELSSADEK2	19378.8	18225.4	16593.2
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	DETGFATYKPQVIIR	DETGFATYKPQVIIR	3	DETGFATYKPQVIIR3	43439	62235.1	59591.7
P85515	P85515	ACTZ_RAT	Actr1a	Alpha-centractin	1	DETLETEK	DETLETEK	1	DETLETEK1	1835.46	3446.31	2168.25
P85515	P85515	ACTZ_RAT	Actr1a	Alpha-centractin	1	DETLETEK	DETLETEK	2	DETLETEK2	244119	229381	264893
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	DETLKEDK	DETLKEDK	2	DETLKEDK2			127008
D3ZRC4	D3ZRC4	PLPL8_RAT	Pnpla8	Calcium-independent phospholipase A2-gamma	1	DETLQAAVR	DETLQAAVR	2	DETLQAAVR2	3232.58	5355.72	6239.67
P27615	P27615	SCRB2_RAT	Scarb2	Lysosome membrane protein 2	1	DETLYIFPSDFCR	DETLYIFPSDFC(UniMod:4)R	2	DETLYIFPSDFC(UniMod:4)R2	14962.9	14482.4	14675.2
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	DETMQPAKPSFLEYFEQK	DETMQPAKPSFLEYFEQK	3	DETMQPAKPSFLEYFEQK3	19951.3	10503.9	5872.25
P63245	P63245	RACK1_RAT	Rack1	Small ribosomal subunit protein RACK1	1	DETNYGIPQR	DETNYGIPQR	2	DETNYGIPQR2	48431.8	41032.5	35649.4
A0A8J8YPH6	A0A8J8YPH6	A0A8J8YPH6_RAT	Hps4	HPS4, biogenesis of lysosomal organelles complex 3 subunit 2	1	DETSPTGSTYNFLHYDR	DETSPTGSTYNFLHYDR	3	DETSPTGSTYNFLHYDR3	19016	12911.8	18587.3
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	DETVDDFWK	DETVDDFWK	2	DETVDDFWK2	51943.2	54018.1	56219.3
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	DETVSDCSPHIANIGR	DETVSDC(UniMod:4)SPHIANIGR	2	DETVSDC(UniMod:4)SPHIANIGR2	35916.2	31204.2	36028.8
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	DETVSDCSPHIANIGR	DETVSDC(UniMod:4)SPHIANIGR	3	DETVSDC(UniMod:4)SPHIANIGR3	1.02181e+06	1.12536e+06	1.0686e+06
Q8CIZ5	F1LVL9;Q8CIZ5	DMBT1_RAT	Dmbt1	Deleted in malignant brain tumors 1 protein	0	DETYQSYSSPSPR	DETYQSYSSPSPR	2	DETYQSYSSPSPR2	188841	211213	166290
Q8CIZ5	F1LVL9;Q8CIZ5	DMBT1_RAT	Dmbt1	Deleted in malignant brain tumors 1 protein	0	DETYQSYSSPSPR	DETYQSYSSPSPR	3	DETYQSYSSPSPR3	4000.61	9429.19	3693.46
P51111	P51111	HD_RAT	Htt	Huntingtin	1	DEVAEAGDPESKPCR	DEVAEAGDPESKPC(UniMod:4)R	2	DEVAEAGDPESKPC(UniMod:4)R2	3705.49	3070.76	2084.98
P51111	P51111	HD_RAT	Htt	Huntingtin	1	DEVAEAGDPESKPCR	DEVAEAGDPESKPC(UniMod:4)R	3	DEVAEAGDPESKPC(UniMod:4)R3	64037.9	112123	104074
P47196	P47196	AKT1_RAT	Akt1	RAC-alpha serine/threonine-protein kinase	1	DEVAHTLTENR	DEVAHTLTENR	2	DEVAHTLTENR2	1973.31	840.745	1787.6
P47196	P47196	AKT1_RAT	Akt1	RAC-alpha serine/threonine-protein kinase	1	DEVAHTLTENR	DEVAHTLTENR	3	DEVAHTLTENR3	46171.8	30811.7	50080.2
Q63484	Q63484	AKT3_RAT	Akt3	RAC-gamma serine/threonine-protein kinase	1	DEVAHTLTESR	DEVAHTLTESR	2	DEVAHTLTESR2	495.707	2523.82	
Q63484	Q63484	AKT3_RAT	Akt3	RAC-gamma serine/threonine-protein kinase	1	DEVAHTLTESR	DEVAHTLTESR	3	DEVAHTLTESR3	4371.03	4271.18	2492.32
P47197	P47197	AKT2_RAT	Akt2	RAC-beta serine/threonine-protein kinase	1	DEVAHTVTESR	DEVAHTVTESR	2	DEVAHTVTESR2	1799.56		
P47197	P47197	AKT2_RAT	Akt2	RAC-beta serine/threonine-protein kinase	1	DEVAHTVTESR	DEVAHTVTESR	3	DEVAHTVTESR3	3717.35	6423.8	10471.7
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	DEVCVKPGLCR	DEVC(UniMod:4)VKPGLC(UniMod:4)R	3	DEVC(UniMod:4)VKPGLC(UniMod:4)R3	34934.2	33665.6	44286.7
O70436	P84025;O70436	SMAD2_RAT	Smad2	Mothers against decapentaplegic homolog 2	0	DEVCVNPYHYQR	DEVC(UniMod:4)VNPYHYQR	3	DEVC(UniMod:4)VNPYHYQR3	7290.18	882.938	
Q6AY41	Q6AY41	CC50A_RAT	Tmem30a	Cell cycle control protein 50A	1	DEVDGGPTGPPGGAAK	DEVDGGPTGPPGGAAK	2	DEVDGGPTGPPGGAAK2	236935	214022	248062
O08874	O08874	PKN2_RAT	Pkn2	Serine/threonine-protein kinase N2	1	DEVDSLMCEK	DEVDSLMC(UniMod:4)EK	2	DEVDSLMC(UniMod:4)EK2	7658.27	2489.36	4205.96
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	DEVEVSDDDEKEPEVDYR	DEVEVSDDDEKEPEVDYR	3	DEVEVSDDDEKEPEVDYR3	4154.81	4807.4	4130.3
Q5RJR2	Q5RJR2;A0A8I6GGS8	TWF1_RAT	Twf1	Twinfilin-1	0	DEVFGTVK	DEVFGTVK	2	DEVFGTVK2	100610	94242.2	99303.5
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	DEVHVSDEFSENR	DEVHVSDEFSENR	3	DEVHVSDEFSENR3	18492.9	13433.5	18649.7
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	DEVIDAVR	DEVIDAVR	2	DEVIDAVR2	74406.8	97299.8	76888.8
P40241	P40241	CD9_RAT	Cd9	CD9 antigen	1	DEVIKELQEFYK	DEVIKELQEFYK	2	DEVIKELQEFYK2	51691.5	82804.7	65650.8
P40241	P40241	CD9_RAT	Cd9	CD9 antigen	1	DEVIKELQEFYK	DEVIKELQEFYK	3	DEVIKELQEFYK3	106299	113211	103344
P40241	P40241	CD9_RAT	Cd9	CD9 antigen	1	DEVIKELQEFYKDTYQK	DEVIKELQEFYKDTYQK	3	DEVIKELQEFYKDTYQK3	13785.6	6630.74	14646.4
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	DEVITCQPGDSEEK	DEVITC(UniMod:4)QPGDSEEK	2	DEVITC(UniMod:4)QPGDSEEK2	6014.69	5805.59	8632.4
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	DEVLAQER	DEVLAQER	2	DEVLAQER2	4901.66	5771.65	6627.89
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	DEVLSPSWDTLFSGSQGQLHSGAR	DEVLSPSWDTLFSGSQGQLHSGAR	3	DEVLSPSWDTLFSGSQGQLHSGAR3	4522.16		
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	DEVNETDLK	DEVNETDLK	2	DEVNETDLK2	79312.5	93760.5	87773.1
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	DEVPSEDVK	DEVPSEDVK	2	DEVPSEDVK2	23808	15962.1	16461.3
O55043	O55043	ARHG7_RAT	Arhgef7	Rho guanine nucleotide exchange factor 7	1	DEVQELR	DEVQELR	2	DEVQELR2	35685.2	34733.7	32328.6
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	DEVQNAVR	DEVQNAVR	2	DEVQNAVR2	35134.8	30543	25876.1
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	DEVTCVGHIIGAVVADTPEHAQR	DEVTC(UniMod:4)VGHIIGAVVADTPEHAQR	3	DEVTC(UniMod:4)VGHIIGAVVADTPEHAQR3	29499.4	18670.8	28202.4
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	DEVTCVGHIIGAVVADTPEHAQR	DEVTC(UniMod:4)VGHIIGAVVADTPEHAQR	4	DEVTC(UniMod:4)VGHIIGAVVADTPEHAQR4	65224.7	61012.1	71042.9
D3ZZL9	D3ZZL9	GCC2_RAT	Gcc2	GRIP and coiled-coil domain-containing protein 2	1	DEVTYMNNLK	DEVTYMNNLK	2	DEVTYMNNLK2		5485.62	3366.46
Q5XI55	Q5XI55	NGLY1_RAT	Ngly1	Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase	1	DEVVDVTWR	DEVVDVTWR	2	DEVVDVTWR2	8778.54		4145.17
D4A7F6	D4A7F6	D4A7F6_RAT	Colec10	Collectin subfamily member 10	1	DEVVNTLIADYVAK	DEVVNTLIADYVAK	2	DEVVNTLIADYVAK2	428653	439140	459289
D4A7F6	D4A7F6	D4A7F6_RAT	Colec10	Collectin subfamily member 10	1	DEVVNTLIADYVAK	DEVVNTLIADYVAK	3	DEVVNTLIADYVAK3	73478.9	81736.9	86216
P32038	P32038	CFAD_RAT	Cfd	Complement factor D	1	DEVVQVLLGAHSLSSPEPYK	DEVVQVLLGAHSLSSPEPYK	3	DEVVQVLLGAHSLSSPEPYK3	176959	186886	152612
Q6P799	Q6P799	SYSC_RAT	Sars1	Serine--tRNA ligase, cytoplasmic	1	DEWLRPEDLPIK	DEWLRPEDLPIK	3	DEWLRPEDLPIK3	26081.8	29974.6	16885.1
Q63055	Q63055	ARFRP_RAT	Arfrp1	ADP-ribosylation factor-related protein 1	1	DEYCILILGLDNAGK	DEYC(UniMod:4)ILILGLDNAGK	2	DEYC(UniMod:4)ILILGLDNAGK2	2623.82	10180.9	7304.32
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	DEYEAEINR	DEYEAEINR	2	DEYEAEINR2	22178.5	22345.4	26890.4
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	DEYEAEINRDNPLGMK	DEYEAEINRDNPLGMK	3	DEYEAEINRDNPLGMK3	54233.3	72161.4	77192
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	DEYIEQLK	DEYIEQLK	2	DEYIEQLK2	121430	140292	120392
D3ZFJ3	D3ZFJ3	3BP1_RAT	Sh3bp1	SH3 domain-binding protein 1	1	DEYLADLYHFSTK	DEYLADLYHFSTK	2	DEYLADLYHFSTK2	7567.3		10492.4
D3ZFJ3	D3ZFJ3	3BP1_RAT	Sh3bp1	SH3 domain-binding protein 1	1	DEYLADLYHFSTK	DEYLADLYHFSTK	3	DEYLADLYHFSTK3	4412.93	2418.64	7004.75
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	DEYLINSQTTEHIIK	DEYLINSQTTEHIIK	3	DEYLINSQTTEHIIK3	11151.6	14139.2	11413.7
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	DFAAEVVHPGDLK	DFAAEVVHPGDLK	2	DFAAEVVHPGDLK2			3181.41
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	DFAAEVVHPGDLK	DFAAEVVHPGDLK	3	DFAAEVVHPGDLK3	17636.3	11952.5	13408.4
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	DFAAVEEVAPAKPPR	DFAAVEEVAPAKPPR	2	DFAAVEEVAPAKPPR2	14240	16941.6	9377.27
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	DFAAVEEVAPAKPPR	DFAAVEEVAPAKPPR	3	DFAAVEEVAPAKPPR3	260894	273496	227651
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	DFACVHQTLK	DFAC(UniMod:4)VHQTLK	2	DFAC(UniMod:4)VHQTLK2	793440	552701	450371
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	DFACVHQTLK	DFAC(UniMod:4)VHQTLK	3	DFAC(UniMod:4)VHQTLK3	10497.3	10318.9	8541.64
D3ZVB7	D3ZVB7	D3ZVB7_RAT	Ogn	Osteoglycin	1	DFADMPNLR	DFADMPNLR	2	DFADMPNLR2	21491	20576.7	21079.3
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	DFAEHVLIPGTK	DFAEHVLIPGTK	2	DFAEHVLIPGTK2	2.66492e+06	2.53083e+06	2.60073e+06
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	DFAEHVLIPGTK	DFAEHVLIPGTK	3	DFAEHVLIPGTK3	9.98237e+06	1.00175e+07	1.14114e+07
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	DFAETHIK	DFAETHIK	2	DFAETHIK2	21814	17603.4	21305
A0A8I6AIW6	A0A8I6AIW6	A0A8I6AIW6_RAT	Tmem222	Transmembrane protein 222	1	DFAGPYFVSEDNMAFGKPAK	DFAGPYFVSEDNMAFGKPAK	3	DFAGPYFVSEDNMAFGKPAK3	13426.4	8148.27	10774.5
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	DFALDSEESR	DFALDSEESR	2	DFALDSEESR2	9021.81	8342.15	5646
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	DFALDVEMK	DFALDVEMK	2	DFALDVEMK2	78503.2	88132.3	67608.7
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	DFALQNPGVVPR	DFALQNPGVVPR	2	DFALQNPGVVPR2	8.32936e+06	21812.9	8.68928e+06
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	DFALQNPGVVPR	DFALQNPGVVPR	3	DFALQNPGVVPR3	168994	208471	213686
Q91XU8	Q91XU8;O35052	CDS2_RAT	Cds2	Phosphatidate cytidylyltransferase 2	0	DFANTIPGHGGIMDR	DFANTIPGHGGIMDR	2	DFANTIPGHGGIMDR2	10972.7	9077.31	7701.67
Q91XU8	Q91XU8;O35052	CDS2_RAT	Cds2	Phosphatidate cytidylyltransferase 2	0	DFANTIPGHGGIMDR	DFANTIPGHGGIMDR	3	DFANTIPGHGGIMDR3	37219.1	49149.1	41499.1
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	DFAPGKPLNCIIK	DFAPGKPLNC(UniMod:4)IIK	2	DFAPGKPLNC(UniMod:4)IIK2	26517.4	20587.9	23898.6
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	DFAPGKPLNCIIK	DFAPGKPLNC(UniMod:4)IIK	3	DFAPGKPLNC(UniMod:4)IIK3	280324	226327	288477
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	DFAPLTPNIVR	DFAPLTPNIVR	2	DFAPLTPNIVR2	20148	43982.7	43400.2
B5DF55	B5DF55	B5DF55_RAT	Stam	Signal transducing adaptor molecule	1	DFASEVSNVLNK	DFASEVSNVLNK	2	DFASEVSNVLNK2	9913.6	6548.8	15411.4
A0A8I6ASC6	A0A8I6ASC6	A0A8I6ASC6_RAT	Igdcc4	Immunoglobulin superfamily, DCC subclass, member 4	1	DFATAAAELR	DFATAAAELR	2	DFATAAAELR2	11130.8	9134.96	7988.42
F1MAF8	F1MAF8	F1MAF8_RAT	Atg2b	Autophagy related 2B	1	DFATAPPTSPAK	DFATAPPTSPAK	2	DFATAPPTSPAK2	5872.83	6686.51	
Q5XHY7	Q5XHY7	STAM2_RAT	Stam2	Signal transducing adapter molecule 2	1	DFATEVR	DFATEVR	2	DFATEVR2	31254.2	23322.6	30295.1
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	DFATPTLQTSDQSPGK	DFATPTLQTSDQSPGK	2	DFATPTLQTSDQSPGK2	2940.05	2680.83	7924.4
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	DFATVYVDAVK	DFATVYVDAVK	2	DFATVYVDAVK2	404642	406371	306141
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	DFATVYVDAVK	DFATVYVDAVK	3	DFATVYVDAVK3	392179	390305	413586
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	DFATVYVDAVKDSGR	DFATVYVDAVKDSGR	2	DFATVYVDAVKDSGR2	4732.93	4938.41	3732.83
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	DFATVYVDAVKDSGR	DFATVYVDAVKDSGR	3	DFATVYVDAVKDSGR3	23457.4	20883.9	23443.5
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	DFATVYVDAVKDSGRDYVSQFESSTLGK	DFATVYVDAVKDSGRDYVSQFESSTLGK	4	DFATVYVDAVKDSGRDYVSQFESSTLGK4	7857.03	6858.8	8827.28
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	DFCEHGTR	DFC(UniMod:4)EHGTR	2	DFC(UniMod:4)EHGTR2	6818.21	10774.3	
E9PU15	E9PU15	E9PU15_RAT	Dicer1	Endoribonuclease Dicer	1	DFCQGNQLTYFK	DFC(UniMod:4)QGNQLTYFK	2	DFC(UniMod:4)QGNQLTYFK2		4399.78	
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	DFDALLINPR	DFDALLINPR	2	DFDALLINPR2	75754.9	85281.9	83843.6
B1H274	B1H274	B1H274_RAT	Atg4a	Cysteine protease	1	DFDNWCSLVQK	DFDNWC(UniMod:4)SLVQK	2	DFDNWC(UniMod:4)SLVQK2	4553.15	4528.54	3908.99
P01026	P01026	CO3_RAT	C3	Complement C3	1	DFDSVPPVVR	DFDSVPPVVR	2	DFDSVPPVVR2	1.5542e+06	1.71045e+06	1.3679e+06
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	DFEADSWSLAVDSSFLQQHK	DFEADSWSLAVDSSFLQQHK	3	DFEADSWSLAVDSSFLQQHK3	10378.3	11293.4	8829.65
Q5U2Q4	Q5U2Q4	PAR16_RAT	Parp16	Protein mono-ADP-ribosyltransferase PARP16	1	DFEALLADTGRLPNLK	DFEALLADTGRLPNLK	3	DFEALLADTGRLPNLK3	5068.5	3315.71	6834.23
D3ZCD0	D3ZCD0	D3ZCD0_RAT	Tek	receptor protein-tyrosine kinase	1	DFEALMNQHQDPLEVTQDVTR	DFEALMNQHQDPLEVTQDVTR	3	DFEALMNQHQDPLEVTQDVTR3	5287.22	6984.87	
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	DFEIAELK	DFEIAELK	1	DFEIAELK1	128055	88431.4	81833.1
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	DFEIAELK	DFEIAELK	2	DFEIAELK2	8043.17	4654.81	101795
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	DFEIAELKK	DFEIAELKK	2	DFEIAELKK2	6599.3	7817.42	3768.86
Q6AXR1	Q6AXR1	Q6AXR1_RAT	Tbc1d20	TBC1 domain family, member 20	1	DFELASTQQRPDMVLR	DFELASTQQRPDMVLR	3	DFELASTQQRPDMVLR3	8836.51	5372.92	18536.6
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	DFELPGDTLYYR	DFELPGDTLYYR	2	DFELPGDTLYYR2	60204	52899.8	42188.4
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	DFEPQPGNMSHPR	DFEPQPGNMSHPR	3	DFEPQPGNMSHPR3	20627	14326.2	
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	DFEQDILEDMYHAIK	DFEQDILEDMYHAIK	3	DFEQDILEDMYHAIK3	1344.12	3000.86	
A0A0G2K9M5	A0A0G2K9M5	A0A0G2K9M5_RAT	Tbc1d8b	TBC1 domain family member 8B	1	DFEQLVAK	DFEQLVAK	2	DFEQLVAK2	7604.09	4166.84	
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	DFEQPFINKPDTLLVNR	DFEQPFINKPDTLLVNR	3	DFEQPFINKPDTLLVNR3	644347	629656	623837
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	DFEQPFINKPDTLLVNRK	DFEQPFINKPDTLLVNRK	3	DFEQPFINKPDTLLVNRK3	72034.1	95101.7	106681
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	DFEQPFINKPDTLLVNRK	DFEQPFINKPDTLLVNRK	4	DFEQPFINKPDTLLVNRK4	62702.2	85742.3	91263.9
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	DFEQPLAISR	DFEQPLAISR	2	DFEQPLAISR2	476264	452826	428324
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	DFESCLGAK	DFESC(UniMod:4)LGAK	2	DFESC(UniMod:4)LGAK2	16802.2	11797.2	11925.2
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	DFESHITNYK	DFESHITNYK	2	DFESHITNYK2	16744.7	13882.1	12047.3
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	DFESHITNYK	DFESHITNYK	3	DFESHITNYK3	109817	137076	137261
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	DFETQAAAQAR	DFETQAAAQAR	2	DFETQAAAQAR2	59698.4	1.87438e+06	2.03887e+06
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	DFETQAAAQAR	DFETQAAAQAR	3	DFETQAAAQAR3	121569	128091	140967
Q01460	Q01460	DIAC_RAT	Ctbs	Di-N-acetylchitobiase	1	DFEVFVFDVGQK	DFEVFVFDVGQK	2	DFEVFVFDVGQK2	8640.69	10481.7	9762.62
E9PTA5	E9PTA5	E9PTA5_RAT	Pign	GPI ethanolamine phosphate transferase 1	1	DFFDAAR	DFFDAAR	2	DFFDAAR2	47658.5	42458.1	57565.9
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	DFFESNVLQLDPSLLTENGMK	DFFESNVLQLDPSLLTENGMK	3	DFFESNVLQLDPSLLTENGMK3	3538.35	2336.76	5283.59
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	DFFEVAK	DFFEVAK	2	DFFEVAK2	31680.5	39071.8	34457.7
P24473	P24473	GSTK1_RAT	Gstk1	Glutathione S-transferase kappa 1	1	DFFGEHVK	DFFGEHVK	2	DFFGEHVK2	61941.2	44656.5	54692
A0A8I6A0R8	A0A8I6A0R8	A0A8I6A0R8_RAT	Srl	Sarcalumenin	1	DFFGINPISNFK	DFFGINPISNFK	2	DFFGINPISNFK2	5120.61	3507.7	6986.18
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	DFFLAELEK	DFFLAELEK	2	DFFLAELEK2	134664	132772	117219
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	DFFLANASR	DFFLANASR	2	DFFLANASR2	156135	159273	160762
Q8K581	Q8K581	TXND9_RAT	Txndc9	Thioredoxin domain-containing protein 9	1	DFFQEVK	DFFQEVK	2	DFFQEVK2	39652.4	37695.3	46551.7
D3ZYS7	D3ZYS7	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	1	DFFQSYGNVVELR	DFFQSYGNVVELR	2	DFFQSYGNVVELR2	76645.2	86828.4	72079.7
F1M171	F1M171	F1M171_RAT	Leg1	Similar to RIKEN cDNA 2310057J18	1	DFFQYMQLPSSDFDGLLK	DFFQYMQLPSSDFDGLLK	3	DFFQYMQLPSSDFDGLLK3	14364.9	20268.7	10459.2
F1M171	F1M171	F1M171_RAT	Leg1	Similar to RIKEN cDNA 2310057J18	1	DFFQYMQLPSSDFDGLLKK	DFFQYMQLPSSDFDGLLKK	3	DFFQYMQLPSSDFDGLLKK3	6895.97	11888.4	15236.6
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	DFGDSLAR	DFGDSLAR	2	DFGDSLAR2	39090.8	38867.4	37614.2
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	DFGFFPR	DFGFFPR	2	DFGFFPR2	59478	47957.7	46399.7
B5DEY9	B5DEY9	B5DEY9_RAT	Csgalnact1	Hexosyltransferase	1	DFGFGMTCQYR	DFGFGMTC(UniMod:4)QYR	2	DFGFGMTC(UniMod:4)QYR2	4762.51	13220.6	5350.1
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	DFGGITNGKPEDK	DFGGITNGKPEDK	3	DFGGITNGKPEDK3	18505.8	59595.5	36839
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	DFGHIQYVASYK	DFGHIQYVASYK	2	DFGHIQYVASYK2	5811.05	5506.3	9472.67
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	DFGHIQYVASYK	DFGHIQYVASYK	3	DFGHIQYVASYK3	24641.5	23836.7	23505.3
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	DFGHTVDSVEK	DFGHTVDSVEK	2	DFGHTVDSVEK2	9307.74	10229.6	15236.4
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	DFGHTVDSVEK	DFGHTVDSVEK	3	DFGHTVDSVEK3	76405.8	76711.6	76049.4
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	DFGNHQVTGK	DFGNHQVTGK	2	DFGNHQVTGK2	8323.16	7069.36	15273.3
Q6UPR8	Q6UPR8	ERMP1_RAT	Ermp1	Endoplasmic reticulum metallopeptidase 1	1	DFGNIPGIDLAFIENGYIYHTK	DFGNIPGIDLAFIENGYIYHTK	3	DFGNIPGIDLAFIENGYIYHTK3	6019.59	3943.01	8500.56
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	DFGPSSQHFLSTSVQLPWQR	DFGPSSQHFLSTSVQLPWQR	3	DFGPSSQHFLSTSVQLPWQR3	251153	260008	248544
P07895	P07895	SODM_RAT	Sod2	Superoxide dismutase [Mn], mitochondrial	1	DFGSFEK	DFGSFEK	1	DFGSFEK1	20683.6	23922.4	13925.2
P07895	P07895	SODM_RAT	Sod2	Superoxide dismutase [Mn], mitochondrial	1	DFGSFEK	DFGSFEK	2	DFGSFEK2	963075	955449	995044
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	DFGTHFITEAVLGGIYEYTLIMNK	DFGTHFITEAVLGGIYEYTLIMNK	3	DFGTHFITEAVLGGIYEYTLIMNK3		4610.59	5474.54
Q63615	Q63615	VP33A_RAT	Vps33a	Vacuolar protein sorting-associated protein 33A	1	DFHILFVPR	DFHILFVPR	2	DFHILFVPR2	19697.8	22344.3	22499.9
Q63615	Q63615	VP33A_RAT	Vps33a	Vacuolar protein sorting-associated protein 33A	1	DFHILFVPR	DFHILFVPR	3	DFHILFVPR3	10583.1	12409.8	12057.5
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	DFHISLFR	DFHISLFR	2	DFHISLFR2	28974.9	33908.8	29364.2
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	DFHQEVFLGK	DFHQEVFLGK	2	DFHQEVFLGK2	17464.3	21925.9	20315.8
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	DFHQEVFLGK	DFHQEVFLGK	3	DFHQEVFLGK3	236004	231791	232640
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	DFHYIVFGAPGTYNWK	DFHYIVFGAPGTYNWK	2	DFHYIVFGAPGTYNWK2	60336.7	67425.2	68849.8
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	DFHYIVFGAPGTYNWK	DFHYIVFGAPGTYNWK	3	DFHYIVFGAPGTYNWK3	475557	495780	431134
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	DFIATQGPLPNTLK	DFIATQGPLPNTLK	2	DFIATQGPLPNTLK2	125667	121995	153397
D3ZAZ0	D3ZAZ0	D3ZAZ0_RAT	Eif3m	Eukaryotic translation initiation factor 3 subunit M	1	DFIDSLGLLHEQNMAK	DFIDSLGLLHEQNMAK	2	DFIDSLGLLHEQNMAK2	8936.55	14573.8	7364.98
D3ZAZ0	D3ZAZ0	D3ZAZ0_RAT	Eif3m	Eukaryotic translation initiation factor 3 subunit M	1	DFIDSLGLLHEQNMAK	DFIDSLGLLHEQNMAK	3	DFIDSLGLLHEQNMAK3	123501	105942	97080.6
A0A8I5ZP70	A0A8I5ZP70	A0A8I5ZP70_RAT	Tom1l2	Target of myb1 like 2 membrane trafficking protein	1	DFIDSVLVR	DFIDSVLVR	2	DFIDSVLVR2	43858.7	45860.2	47536
P13107	P13107	CP2B3_RAT	Cyp2b3	Cytochrome P450 2B3	1	DFIDTFLLHMEK	DFIDTFLLHMEK	3	DFIDTFLLHMEK3	3878.07		2798.51
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	DFIEHLDRPPGSSYFR	DFIEHLDRPPGSSYFR	3	DFIEHLDRPPGSSYFR3	19358.4	10217.1	
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	DFIEHLDRPPGSSYFR	DFIEHLDRPPGSSYFR	4	DFIEHLDRPPGSSYFR4	8832.17	11314	12496.7
P70541	P70541	EI2BG_RAT	Eif2b3	Translation initiation factor eIF-2B subunit gamma	1	DFIGVDSTGK	DFIGVDSTGK	2	DFIGVDSTGK2	40849.5	32245.8	43413.7
Q5PPJ9	Q5PPJ9	SHLB2_RAT	Sh3glb2	Endophilin-B2	1	DFIHTASLSFLTPLR	DFIHTASLSFLTPLR	2	DFIHTASLSFLTPLR2	8077.08		
Q5PPJ9	Q5PPJ9	SHLB2_RAT	Sh3glb2	Endophilin-B2	1	DFIHTASLSFLTPLR	DFIHTASLSFLTPLR	3	DFIHTASLSFLTPLR3	11355.2	16078.9	20857.8
P0C1S9	P0C1S9	DGLB_RAT	Daglb	Diacylglycerol lipase-beta	1	DFIHVSFHDK	DFIHVSFHDK	3	DFIHVSFHDK3	33005.1	39602.6	18632.3
Q5BJ92	Q5BJ92	PP4C_RAT	Ppp4c	Serine/threonine-protein phosphatase 4 catalytic subunit	1	DFIIFEAAPQETR	DFIIFEAAPQETR	2	DFIIFEAAPQETR2	32636.9	43623	25012.4
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	DFIILSCVR	DFIILSC(UniMod:4)VR	2	DFIILSC(UniMod:4)VR2	28126	15101.1	14577.1
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	DFILPISDVR	DFILPISDVR	2	DFILPISDVR2	65616.8	67163.5	71874
P84850	P84850	D2HDH_RAT	D2hgdh	D-2-hydroxyglutarate dehydrogenase, mitochondrial	1	DFIMPLDLGAK	DFIMPLDLGAK	2	DFIMPLDLGAK2		7655.97	12857.7
A0A8I6A1Z5	A0A8I6A1Z5	A0A8I6A1Z5_RAT	Tmx1	Thioredoxin-related transmembrane protein 1	1	DFINFISEK	DFINFISEK	2	DFINFISEK2	215714	221113	249003
P06883	P06883	GLUC_RAT	Gcg	Pro-glucagon	1	DFINWLIQTK	DFINWLIQTK	2	DFINWLIQTK2	13442.3	12600.1	10974.8
Q68FS1	Q68FS1	NUBP2_RAT	Nubp2	Cytosolic Fe-S cluster assembly factor NUBP2	1	DFIQEFPK	DFIQEFPK	2	DFIQEFPK2	3840.6	4798.99	4104.36
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	DFISNLLK	DFISNLLK	1	DFISNLLK1	23284.3	13315.5	10531.1
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	DFISNLLK	DFISNLLK	2	DFISNLLK2	791512	604889	650557
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	DFISNLLKK	DFISNLLKK	2	DFISNLLKK2	11210.8	17148.3	20394.9
D3ZUN5	D3ZUN5	D3ZUN5_RAT	Pofut2	GDP-fucose protein O-fucosyltransferase 2	1	DFIWGHREDVPSLEGAVK	DFIWGHREDVPSLEGAVK	3	DFIWGHREDVPSLEGAVK3	4933.21	10068.3	4674.27
O70467	O70467	ANM3_RAT	Prmt3	Protein arginine N-methyltransferase 3	1	DFIYQNPHIFK	DFIYQNPHIFK	2	DFIYQNPHIFK2	2624.98	1940.89	3427.72
O70467	O70467	ANM3_RAT	Prmt3	Protein arginine N-methyltransferase 3	1	DFIYQNPHIFK	DFIYQNPHIFK	3	DFIYQNPHIFK3	6960.4	8023.94	
A1L1L9	A1L1L9;A0A8I6A4F9	A1L1L9_RAT	Tmem65	RGD1563224 protein	0	DFIYSLHSTER	DFIYSLHSTER	3	DFIYSLHSTER3	4016.17	13419.9	8442.81
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	DFIYVSQDPK	DFIYVSQDPK	2	DFIYVSQDPK2	181503	142967	155527
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	DFKPGDR	DFKPGDR	2	DFKPGDR2	401193	405948	401587
D3ZUQ1	D3ZUQ1	D3ZUQ1_RAT	Lipo1	Lipase	1	DFLADPK	DFLADPK	1	DFLADPK1	6827.87	7095.74	6608.85
D3ZUQ1	D3ZUQ1	D3ZUQ1_RAT	Lipo1	Lipase	1	DFLADPK	DFLADPK	2	DFLADPK2	670600	764911	708158
D3ZUQ1	D3ZUQ1	D3ZUQ1_RAT	Lipo1	Lipase	1	DFLADPKDVANLVPK	DFLADPKDVANLVPK	3	DFLADPKDVANLVPK3	63177.9	87048.3	88200.8
Q05962	Q05962	ADT1_RAT	Slc25a4	ADP/ATP translocase 1	1	DFLAGGIAAAVSK	DFLAGGIAAAVSK	2	DFLAGGIAAAVSK2	326110	392957	333510
Q05962	Q05962	ADT1_RAT	Slc25a4	ADP/ATP translocase 1	1	DFLAGGIAAAVSK	DFLAGGIAAAVSK	3	DFLAGGIAAAVSK3	7494.85	5327.17	8551.21
Q09073	A0A8I5Y643;A0A8I6GK78;Q09073	ADT2_RAT	Slc25a5	ADP/ATP translocase 2	0	DFLAGGVAAAISK	DFLAGGVAAAISK	2	DFLAGGVAAAISK2	1.28386e+06	1.39874e+06	1.26567e+06
Q09073	A0A8I5Y643;A0A8I6GK78;Q09073	ADT2_RAT	Slc25a5	ADP/ATP translocase 2	0	DFLAGGVAAAISK	DFLAGGVAAAISK	3	DFLAGGVAAAISK3	17786.9	19724.7	13697.7
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	DFLALALLDGR	DFLALALLDGR	2	DFLALALLDGR2	7021.32	3427.17	5582.45
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	DFLEAVNK	DFLEAVNK	1	DFLEAVNK1	6727.27	4966.94	
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	DFLEAVNK	DFLEAVNK	2	DFLEAVNK2	133659	149676	144862
O54923	A0A0G2JYR1;O54923	EXOC6_RAT	Exoc6	Exocyst complex component 6	0	DFLESIR	DFLESIR	2	DFLESIR2		18996.2	16735.9
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	DFLFPQLR	DFLFPQLR	2	DFLFPQLR2	57232	56253	55320
P49432	P49432	ODPB_RAT	Pdhb	Pyruvate dehydrogenase E1 component subunit beta, mitochondrial	1	DFLIPIGK	DFLIPIGK	2	DFLIPIGK2	171576	157687	161406
Q63413	Q5U216;Q63413	DX39B_RAT	Ddx39b	Spliceosome RNA helicase Ddx39b	0	DFLLKPELLR	DFLLKPELLR	3	DFLLKPELLR3	14180.4	13887.1	15733.2
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	DFLLPFLEEPMDTEADLQFRPR	DFLLPFLEEPMDTEADLQFRPR	3	DFLLPFLEEPMDTEADLQFRPR3	60878.5	52227.9	55302.7
P63174	D4AD70;P63174;A0A8I6AI91	RL38_RAT	Rpl38	Large ribosomal subunit protein eL38	0	DFLLTAR	DFLLTAR	2	DFLLTAR2	13738.7	7213.68	10964.8
D3ZEF9	D3ZEF9	D3ZEF9_RAT	B3gnt2	Hexosyltransferase	1	DFLLYLR	DFLLYLR	2	DFLLYLR2	39828.7	40841.7	35283.4
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	DFLMLAQTHSK	DFLMLAQTHSK	2	DFLMLAQTHSK2	36379.6	41760	38766
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	DFLMLAQTHSK	DFLMLAQTHSK	3	DFLMLAQTHSK3	76054.7	82937.4	68104.6
P97924	Q6P720;P97924	KALRN_RAT	Kalrn	Kalirin	0	DFLNALQSPIEYQR	DFLNALQSPIEYQR	2	DFLNALQSPIEYQR2	230389	246137	246730
P97924	Q6P720;P97924	KALRN_RAT	Kalrn	Kalirin	0	DFLNALQSPIEYQR	DFLNALQSPIEYQR	3	DFLNALQSPIEYQR3	29989.8	27576.7	30978.5
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	DFLNSFSTLLK	DFLNSFSTLLK	2	DFLNSFSTLLK2	140271	128171	138397
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	DFLPEGEDVHNFLLEQK	DFLPEGEDVHNFLLEQK	3	DFLPEGEDVHNFLLEQK3	16825.5	24754.2	13421.2
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	DFLPLYFGWFLTK	DFLPLYFGWFLTK	2	DFLPLYFGWFLTK2	17588.6		
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	DFLPSLWASIR	DFLPSLWASIR	2	DFLPSLWASIR2	15827.3	10657.9	8194.35
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	DFLPWER	DFLPWER	2	DFLPWER2	22313.8	15948.5	25457.8
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	DFLQLFAPR	DFLQLFAPR	2	DFLQLFAPR2	179739	168883	197817
Q7TSU1	D4A631;Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	0	DFLRPFEHIMK	DFLRPFEHIMK	2	DFLRPFEHIMK2	3774.15	5957.48	7193.2
Q7TSU1	D4A631;Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	0	DFLRPFEHIMK	DFLRPFEHIMK	3	DFLRPFEHIMK3	71186	74342.1	80816.5
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	DFLSGIQK	DFLSGIQK	2	DFLSGIQK2	21634.8	15117.2	14749.2
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	DFLSGIQVEFK	DFLSGIQVEFK	2	DFLSGIQVEFK2	3558.18	3219.83	1818.17
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	DFLTNHYLHFLR	DFLTNHYLHFLR	3	DFLTNHYLHFLR3			9126.94
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	DFLTNHYLHFLR	DFLTNHYLHFLR	4	DFLTNHYLHFLR4	1114.73	7309.67	1468.98
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	DFLTPPLLSVR	DFLTPPLLSVR	2	DFLTPPLLSVR2	104647	92160.1	79576.6
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	DFLVIPSPVLVK	DFLVIPSPVLVK	2	DFLVIPSPVLVK2	70353.1	57496.1	63018
Q5U2R7	Q5U2R7	MESD_RAT	Mesd	LRP chaperone MESD	1	DFLVNQDR	DFLVNQDR	2	DFLVNQDR2	24118	37143.5	17050
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	DFLVNVLER	DFLVNVLER	2	DFLVNVLER2	16108.1	17077.4	3201.74
F7EZW5	F7EZW5	F7EZW5_RAT	Tmem161a	Transmembrane protein 161A	1	DFLYQAPMR	DFLYQAPMR	2	DFLYQAPMR2	13434.3	9904.6	8490.11
D4AB70	D4AB70	D4AB70_RAT	Edem3	alpha-1,2-Mannosidase	1	DFMATNPEHLEILK	DFMATNPEHLEILK	3	DFMATNPEHLEILK3			5712.59
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	DFMILLTNLER	DFMILLTNLER	2	DFMILLTNLER2	9046.1	7083.33	4293.34
Q6AYQ9	Q6AYQ9	Q6AYQ9_RAT	Ppic	Peptidyl-prolyl cis-trans isomerase	1	DFMIQGGDFTAR	DFMIQGGDFTAR	2	DFMIQGGDFTAR2	232010	234615	226811
P24368	P24368	PPIB_RAT	Ppib	Peptidyl-prolyl cis-trans isomerase B	1	DFMIQGGDFTR	DFMIQGGDFTR	2	DFMIQGGDFTR2	402716	383633	374638
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	DFMSVELSDGHVK	DFMSVELSDGHVK	3	DFMSVELSDGHVK3	12388.9	26578.6	20280.7
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	DFNEECPR	DFNEEC(UniMod:4)PR	2	DFNEEC(UniMod:4)PR2	561003	466448	579206
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	DFNLLEQK	DFNLLEQK	2	DFNLLEQK2	8855.53	10453.5	11057.2
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	DFNMPLTISSLK	DFNMPLTISSLK	2	DFNMPLTISSLK2	117069	96838.2	118839
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	DFNMYFYHYSK	DFNMYFYHYSK	2	DFNMYFYHYSK2	2161.95	3307.29	7339.81
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	DFNMYFYHYSK	DFNMYFYHYSK	3	DFNMYFYHYSK3	8477.87	12474	11363.5
G3V7P1	G3V7P1	STX12_RAT	Stx12	Syntaxin-12	1	DFNSIIQTCSGNIQR	DFNSIIQTC(UniMod:4)SGNIQR	2	DFNSIIQTC(UniMod:4)SGNIQR2	78636	71397.4	79057.8
G3V7P1	G3V7P1	STX12_RAT	Stx12	Syntaxin-12	1	DFNSIIQTCSGNIQR	DFNSIIQTC(UniMod:4)SGNIQR	3	DFNSIIQTC(UniMod:4)SGNIQR3	23750.4	26422.5	30769.5
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	DFNVGGYIQAVLDR	DFNVGGYIQAVLDR	2	DFNVGGYIQAVLDR2	8719.32	2603.86	13645.8
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	DFNVPLSISR	DFNVPLSISR	2	DFNVPLSISR2	293126	279456	326133
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	DFPAVDSVLVK	DFPAVDSVLVK	2	DFPAVDSVLVK2	87017.9	85207.6	110270
P06883	P06883	GLUC_RAT	Gcg	Pro-glucagon	1	DFPEEVAIAEELGR	DFPEEVAIAEELGR	2	DFPEEVAIAEELGR2	15469.9	20311.9	4021.04
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	DFPELTMEVDGK	DFPELTMEVDGK	2	DFPELTMEVDGK2	25757.4	28927.1	38664.2
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	DFPEYTFAIADEEDYATEVK	DFPEYTFAIADEEDYATEVK	3	DFPEYTFAIADEEDYATEVK3	10819.4	13212.2	15203.3
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	DFPFELNPEPPEGGPPGPWVLHR	DFPFELNPEPPEGGPPGPWVLHR	3	DFPFELNPEPPEGGPPGPWVLHR3	19579.8	32806.5	25953.5
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	DFPGPPGEGSVPGPGVVSYTTVQDGR	DFPGPPGEGSVPGPGVVSYTTVQDGR	3	DFPGPPGEGSVPGPGVVSYTTVQDGR3	2737.23	5604.3	
A0A8I5ZU41	A0A8I5ZU41	A0A8I5ZU41_RAT	Amy1	Alpha-amylase	1	DFPGVPYSGFDFNDGK	DFPGVPYSGFDFNDGK	2	DFPGVPYSGFDFNDGK2	9478.64	9944.02	10938.3
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	DFPLNDLLSATELDK	DFPLNDLLSATELDK	2	DFPLNDLLSATELDK2	49763.7	57589.7	41119.3
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	DFPLNDLLSATELDKIR	DFPLNDLLSATELDKIR	3	DFPLNDLLSATELDKIR3	73185.5	104714	88615.4
D3ZG43	D3ZG43	D3ZG43_RAT	Ndufs3	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial	1	DFPLTGYVELR	DFPLTGYVELR	2	DFPLTGYVELR2	90795.7	80012	93947.4
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	DFPQMGR	DFPQMGR	2	DFPQMGR2	255737	311474	265942
Q9JJ05	Q9JJ05	C1GLT_RAT	C1galt1	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1	1	DFPTVGLETK	DFPTVGLETK	2	DFPTVGLETK2	41202.5	40692.2	27873.7
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	DFQDYIEPEEGCQGSPQR	DFQDYIEPEEGC(UniMod:4)QGSPQR	3	DFQDYIEPEEGC(UniMod:4)QGSPQR3	23931.2	35313.2	24981.6
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	DFQDYIEPEEGCQGSPQRR	DFQDYIEPEEGC(UniMod:4)QGSPQRR	3	DFQDYIEPEEGC(UniMod:4)QGSPQRR3	4061.81	4433.7	8016.48
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	DFQEDSWGETK	DFQEDSWGETK	2	DFQEDSWGETK2		6865.81	5790.45
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	DFQEETVK	DFQEETVK	2	DFQEETVK2	8896.06	10095.9	14516.7
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	DFQEPLPQK	DFQEPLPQK	2	DFQEPLPQK2	7735.62	14972.1	8383.29
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	DFQEYVEPGEDFPASPQR	DFQEYVEPGEDFPASPQR	3	DFQEYVEPGEDFPASPQR3	12103.4	11073.4	17744.2
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	DFQGKPNFEEFFEILTPK	DFQGKPNFEEFFEILTPK	3	DFQGKPNFEEFFEILTPK3	14430.4	14386.2	17615.3
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	DFQIEAAISK	DFQIEAAISK	2	DFQIEAAISK2	11323.9	11419.7	8305.39
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	DFQIQVQPVR	DFQIQVQPVR	2	DFQIQVQPVR2	247731	210086	217665
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	DFQIQVQPVR	DFQIQVQPVR	3	DFQIQVQPVR3	3498.23	3440.5	
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	DFQLFGSPLGK	DFQLFGSPLGK	2	DFQLFGSPLGK2	4.66746e+06	5.01339e+06	4.81034e+06
B4F7E7	B4F7E7;P19327	PALS1_RAT	Pals1	Protein PALS1	0	DFQNAFK	DFQNAFK	2	DFQNAFK2	13038.7		
Q5FVI6	Q5FVI6	VATC1_RAT	Atp6v1c1	V-type proton ATPase subunit C 1	1	DFQYNEEEMR	DFQYNEEEMR	2	DFQYNEEEMR2	3606.26	5893.47	3493.25
O88339	O88339	EPN1_RAT	Epn1	Epsin-1	1	DFQYVDR	DFQYVDR	2	DFQYVDR2	13128.1	11959.3	18720.6
O88339	O88339	EPN1_RAT	Epn1	Epsin-1	1	DFQYVDRDGK	DFQYVDRDGK	3	DFQYVDRDGK3	3660.98		3342.28
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	DFSAFFQK	DFSAFFQK	2	DFSAFFQK2	95513.8	91001.7	119724
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DFSALESQLQDTQELLQEENR	DFSALESQLQDTQELLQEENR	3	DFSALESQLQDTQELLQEENR3	17691.3	35011.5	4.76858e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DFSALESQLQDTQELLQEENR	DFSALESQLQDTQELLQEENR	4	DFSALESQLQDTQELLQEENR4	24257.3	24324.8	21171.5
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DFSALESQLQDTQELLQEENRQK	DFSALESQLQDTQELLQEENRQK	3	DFSALESQLQDTQELLQEENRQK3	51037.1	38291.1	53429.4
Q06000	Q06000	LIPL_RAT	Lpl	Lipoprotein lipase	1	DFSDIESK	DFSDIESK	2	DFSDIESK2	72434.6	75672.6	94879.4
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	DFSDLAPFITEGLEVHFVEHYR	DFSDLAPFITEGLEVHFVEHYR	4	DFSDLAPFITEGLEVHFVEHYR4	2557.38	4168.6	4805.13
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	DFSELEPDK	DFSELEPDK	2	DFSELEPDK2	10758.9	8239.15	5679.29
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	DFSELEPDKFQNK	DFSELEPDKFQNK	2	DFSELEPDKFQNK2	13372.3	13560	18109.8
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	DFSELEPDKFQNK	DFSELEPDKFQNK	3	DFSELEPDKFQNK3	148192	136526	150067
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	DFSHDDTLDVPTQVELLIK	DFSHDDTLDVPTQVELLIK	3	DFSHDDTLDVPTQVELLIK3	12600.7	11423.3	10459.7
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	DFSIWEETGLK	DFSIWEETGLK	2	DFSIWEETGLK2	481474	581433	526726
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	DFSIWEETGLKEFLK	DFSIWEETGLKEFLK	2	DFSIWEETGLKEFLK2	10538.1	23616.8	
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	DFSIWEETGLKEFLK	DFSIWEETGLKEFLK	3	DFSIWEETGLKEFLK3	38518.9	92994.4	27644.9
Q5XIU9	Q5XIU9	PGRC2_RAT	Pgrmc2	Membrane-associated progesterone receptor component 2	1	DFSLEQLR	DFSLEQLR	2	DFSLEQLR2	56090.6	50742.6	76117.4
A0A0G2K069	A0A0G2K069	A0A0G2K069_RAT	Col11a2	Collagen type XI alpha 2 chain	1	DFSLLTVVR	DFSLLTVVR	2	DFSLLTVVR2	4018.1	11132.8	10505.1
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	DFSMADK	DFSMADK	1	DFSMADK1	5504.62	6738.78	2401.05
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	DFSMADK	DFSMADK	2	DFSMADK2	206878	192602	
Q9Z118	Q9Z118	PTBP3_RAT	Ptbp3	Polypyrimidine tract-binding protein 3	1	DFSNSPLHR	DFSNSPLHR	2	DFSNSPLHR2	8943.32	5214.12	9149.68
F1M625	F1M625	UBP46_RAT	Usp46	Ubiquitin carboxyl-terminal hydrolase 46	1	DFSNTETLCSEQK	DFSNTETLC(UniMod:4)SEQK	2	DFSNTETLC(UniMod:4)SEQK2	3605.49	2778.87	3672.99
Q6P9U8	Q6P9U8	EIF3H_RAT	Eif3h	Eukaryotic translation initiation factor 3 subunit H	1	DFSPEALK	DFSPEALK	2	DFSPEALK2	70628.6	39863.3	77485.1
Q6P9U8	Q6P9U8	EIF3H_RAT	Eif3h	Eukaryotic translation initiation factor 3 subunit H	1	DFSPEALKK	DFSPEALKK	2	DFSPEALKK2	17129.9	11297.2	11462.7
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	DFSPQDSFDDDELDAAVADPDEFER	DFSPQDSFDDDELDAAVADPDEFER	3	DFSPQDSFDDDELDAAVADPDEFER3	11274.2	25664.4	13170.6
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	DFSPTIVEDQAR	DFSPTIVEDQAR	2	DFSPTIVEDQAR2	19741.1	26609.4	25426.8
Q5FVC7	Q5FVC7	ACAP2_RAT	Acap2	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2	1	DFSQMASNNPEK	DFSQMASNNPEK	2	DFSQMASNNPEK2	6856.56	3853.31	4942.19
D4AA31	D4AA31	D4AA31_RAT	Prcp	Prolylcarboxypeptidase	1	DFSQSGPHCSESIR	DFSQSGPHC(UniMod:4)SESIR	3	DFSQSGPHC(UniMod:4)SESIR3	46395.1	67690.5	54518.3
D4AA31	D4AA31	D4AA31_RAT	Prcp	Prolylcarboxypeptidase	1	DFSQSGPHCSESIRR	DFSQSGPHC(UniMod:4)SESIRR	4	DFSQSGPHC(UniMod:4)SESIRR4	13741.6	14185.7	14282.8
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	DFSTSVTPK	DFSTSVTPK	2	DFSTSVTPK2	34049.6	33265.5	29159.3
Q642B4	Q642B4	Q642B4_RAT	Clec14a	C-type lectin domain containing 14A	1	DFSVSSICVQEETGAR	DFSVSSIC(UniMod:4)VQEETGAR	2	DFSVSSIC(UniMod:4)VQEETGAR2	4550.81	8202.14	4852.51
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	DFSWSPGGNIIAFWVPEDKDIPAR	DFSWSPGGNIIAFWVPEDKDIPAR	3	DFSWSPGGNIIAFWVPEDKDIPAR3	19519.4	34685.2	25984
A0A8I5XVA3	A0A8I5XVA3	A0A8I5XVA3_RAT	Tnn	Tenascin N	1	DFTAEDCSEQR	DFTAEDC(UniMod:4)SEQR	2	DFTAEDC(UniMod:4)SEQR2	1327.39	1738.07	3388.17
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	DFTATDLTEFAAR	DFTATDLTEFAAR	2	DFTATDLTEFAAR2	58324.8	44926.1	62373
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	DFTCHQGTVLSCAISSDATK	DFTC(UniMod:4)HQGTVLSC(UniMod:4)AISSDATK	3	DFTC(UniMod:4)HQGTVLSC(UniMod:4)AISSDATK3	6637.48	4947.53	4944.22
O35977	O35977	O35977_RAT	Gfra2	GDNF family receptor alpha-2	1	DFTENPCLR	DFTENPC(UniMod:4)LR	2	DFTENPC(UniMod:4)LR2	46093.5	41061	52220.3
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	DFTGPSGK	DFTGPSGK	2	DFTGPSGK2		86521	39793.2
B0BNI5	B0BNI5	OLFL3_RAT	Olfml3	Olfactomedin-like protein 3	1	DFTLTMAAR	DFTLTMAAR	2	DFTLTMAAR2	10412.9	2981.29	9065.83
P70580	P70580	PGRC1_RAT	Pgrmc1	Membrane-associated progesterone receptor component 1	1	DFTPAELR	DFTPAELR	2	DFTPAELR2	240607	229782	265662
D3ZAF6	D3ZAF6	ATPK_RAT	Atp5mf	ATP synthase subunit f, mitochondrial	1	DFTPSGIAGAFR	DFTPSGIAGAFR	2	DFTPSGIAGAFR2	460643	514006	493027
O35244	A0A8I6ASU0;O35244	PRDX6_RAT	Prdx6	Peroxiredoxin-6	0	DFTPVCTTELGR	DFTPVC(UniMod:4)TTELGR	2	DFTPVC(UniMod:4)TTELGR2	58871.1	46813	52629.2
P58751	P58751	RELN_RAT	Reln	Reelin	1	DFTQAQR	DFTQAQR	2	DFTQAQR2	81375.9	98210.5	96479.3
P81795	C9WPN6;P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	0	DFTSEPR	DFTSEPR	2	DFTSEPR2	128551	140824	142804
P11497	E9PSQ0;P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	0	DFTVASPAEFVTR	DFTVASPAEFVTR	2	DFTVASPAEFVTR2	8748.77	8934.21	3503
D3ZZB2	D3ZZB2	D3ZZB2_RAT	Pex1	Peroxisomal ATPase PEX1	1	DFTVLVDR	DFTVLVDR	2	DFTVLVDR2	4915.64	4352.55	
Q5RKI1	Q5RKI1	IF4A2_RAT	Eif4a2	Eukaryotic initiation factor 4A-II	1	DFTVSALHGDMDQK	DFTVSALHGDMDQK	3	DFTVSALHGDMDQK3	11147.9		15789.6
Q6P3V8	Q6P3V8	Q6P3V8_RAT	Eif4a1	ATP-dependent RNA helicase	1	DFTVSAMHGDMDQK	DFTVSAMHGDMDQK	2	DFTVSAMHGDMDQK2	10664.7	8744.61	6114.84
Q6P3V8	Q6P3V8	Q6P3V8_RAT	Eif4a1	ATP-dependent RNA helicase	1	DFTVSAMHGDMDQK	DFTVSAMHGDMDQK	3	DFTVSAMHGDMDQK3	63613.6	40379	41020.3
Q6P3V8	Q6P3V8	Q6P3V8_RAT	Eif4a1	ATP-dependent RNA helicase	1	DFTVSAMHGDMDQKER	DFTVSAMHGDMDQKER	3	DFTVSAMHGDMDQKER3	8445.96	5935.99	10008.3
Q6P3V8	Q6P3V8	Q6P3V8_RAT	Eif4a1	ATP-dependent RNA helicase	1	DFTVSAMHGDMDQKER	DFTVSAMHGDMDQKER	4	DFTVSAMHGDMDQKER4	3660.67	6117.48	8359.83
Q9R1T1	Q9R1T1	BAF_RAT	Banf1	Barrier-to-autointegration factor	1	DFVAEPMGEKPVGSLAGIGDALGK	DFVAEPMGEKPVGSLAGIGDALGK	3	DFVAEPMGEKPVGSLAGIGDALGK3	13598.7	17851.1	6635.35
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	DFVAQNNTVQIK	DFVAQNNTVQIK	2	DFVAQNNTVQIK2	22113.7	27900.7	31722.9
Q4KLI9	Q4KLI9	FBXW5_RAT	Fbxw5	F-box/WD repeat-containing protein 5	1	DFVASGAEDR	DFVASGAEDR	2	DFVASGAEDR2	7998.26	5934.48	10133.4
B5DFG7	B5DFG7	B5DFG7_RAT	Cytl1	Cytl1 protein	1	DFVASPQCWK	DFVASPQC(UniMod:4)WK	2	DFVASPQC(UniMod:4)WK2	1890.33		
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	DFVDAPR	DFVDAPR	2	DFVDAPR2	90454.3	130958	106872
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	DFVDHLDK	DFVDHLDK	2	DFVDHLDK2	15718.5	13114.8	14893.4
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	DFVDLIIK	DFVDLIIK	2	DFVDLIIK2	9701.23	8560	4167.26
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	DFVEEDNQR	DFVEEDNQR	2	DFVEEDNQR2	4286.74	1585.52	1823.35
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	DFVLHPR	DFVLHPR	2	DFVLHPR2	143794	168268	139789
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	DFVMQQVTCR	DFVMQQVTC(UniMod:4)R	2	DFVMQQVTC(UniMod:4)R2	73149.8	72007.2	66127.6
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	DFVNASSK	DFVNASSK	2	DFVNASSK2	16584.8		8511.4
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	DFVPYITK	DFVPYITK	2	DFVPYITK2	14556.2	14864.7	11805.1
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	DFVQMVR	DFVQMVR	2	DFVQMVR2	434923	444452	460519
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	DFVSALR	DFVSALR	2	DFVSALR2	43755.4	48943.5	40921.2
A0A0G2K1A2	A0A0G2K1A2	A0A0G2K1A2_RAT	Mpo	Myeloperoxidase	1	DFVSCNTLPK	DFVSC(UniMod:4)NTLPK	2	DFVSC(UniMod:4)NTLPK2	31802.4	20820.8	12303.4
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	DFVSEAYLITLGK	DFVSEAYLITLGK	2	DFVSEAYLITLGK2		18798.8	
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	DFVSEAYLITLGK	DFVSEAYLITLGK	3	DFVSEAYLITLGK3		3209.7	
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	DFVSEAYLLTLGK	DFVSEAYLLTLGK	2	DFVSEAYLLTLGK2	38704.1		55676.4
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	DFVSEAYLLTLGK	DFVSEAYLLTLGK	3	DFVSEAYLLTLGK3	3250.77		2680.06
Q9JL55	Q9JL55	GDE1_RAT	Gde1	Glycerophosphodiester phosphodiesterase 1	1	DFVSPDYLK	DFVSPDYLK	2	DFVSPDYLK2	18020.4	25239.7	18544.5
F7EUD8	F7EUD8	F7EUD8_RAT	Trpc6	Transient receptor ion channel domain-containing protein	1	DFVVGLLDLCR	DFVVGLLDLC(UniMod:4)R	2	DFVVGLLDLC(UniMod:4)R2	20322.1	20774.7	23379.6
Q5XIL4	Q5XIL4	Q5XIL4_RAT	Sorbs3	Sorbin and SH3 domain containing 3	1	DFVYPSSAR	DFVYPSSAR	2	DFVYPSSAR2	53186	46275	44681.3
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	DFWEQEVR	DFWEQEVR	2	DFWEQEVR2	136035	143267	126485
D3ZES2	D3ZES2	D3ZES2_RAT	Trappc6b	Trafficking protein particle complex subunit 6B	1	DFWTTVFK	DFWTTVFK	2	DFWTTVFK2	19769.4	16234.6	24399.2
P53534	P53534	PYGB_RAT	Pygb	Glycogen phosphorylase, brain form (Fragment)	1	DFYELEPEK	DFYELEPEK	2	DFYELEPEK2	7817.41	5037.95	10165.9
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	DFYELEPHK	DFYELEPHK	2	DFYELEPHK2	11500.3	13074	2897.18
P30839	P30839	AL3A2_RAT	Aldh3a2	Aldehyde dehydrogenase family 3 member A2	1	DFYGENVK	DFYGENVK	2	DFYGENVK2	42620.1	39650.5	44268.5
Q8CHI9	Q8CHI9	CHSTF_RAT	Chst15	Carbohydrate sulfotransferase 15	1	DFYGPFNTR	DFYGPFNTR	2	DFYGPFNTR2	20063.6	30693.5	
A0A8I6ARV9	A0A8I6ARV9	A0A8I6ARV9_RAT	Ctsa	Carboxypeptidase	1	DFYHLFPEYK	DFYHLFPEYK	2	DFYHLFPEYK2	11021.2	8595.86	8548.21
A0A8I6ARV9	A0A8I6ARV9	A0A8I6ARV9_RAT	Ctsa	Carboxypeptidase	1	DFYHLFPEYK	DFYHLFPEYK	3	DFYHLFPEYK3	46573.9	42480.9	48119.4
A0A8I6ARV9	A0A8I6ARV9	A0A8I6ARV9_RAT	Ctsa	Carboxypeptidase	1	DFYHLFPEYKDNK	DFYHLFPEYKDNK	3	DFYHLFPEYKDNK3	3888.12	4035.79	
P54645	P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	1	DFYLATSPPDSFLDDHHLTRPHPER	DFYLATSPPDSFLDDHHLTRPHPER	4	DFYLATSPPDSFLDDHHLTRPHPER4	13001.5	10570.3	11253.1
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	DFYMTDSISR	DFYMTDSISR	2	DFYMTDSISR2	65100.4	56452.2	55289.8
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	DFYSEYSVTAADFASK	DFYSEYSVTAADFASK	2	DFYSEYSVTAADFASK2	83756.8	78550.3	84375.5
D3ZLR9	D3ZLR9	D3ZLR9_RAT	Kcnk16	Potassium two pore domain channel subfamily K member 16	1	DGAAPGSEPR	DGAAPGSEPR	2	DGAAPGSEPR2	65409.1		93405.6
P13838	P13838	LEUK_RAT	Spn	Leukosialin (Fragment)	1	DGAAPQSL	DGAAPQSL	1	DGAAPQSL1	113828	122897	118638
Q6J2U6	Q6J2U6	RN114_RAT	Rnf114	E3 ubiquitin-protein ligase RNF114	1	DGAAQSAKPASETDPLSR	DGAAQSAKPASETDPLSR	3	DGAAQSAKPASETDPLSR3	7998.99	6428.26	6411.04
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	DGACFCPPGR	DGAC(UniMod:4)FC(UniMod:4)PPGR	2	DGAC(UniMod:4)FC(UniMod:4)PPGR2	148748	110476	82705.3
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	DGACLLLTVLDHDR	DGAC(UniMod:4)LLLTVLDHDR	2	DGAC(UniMod:4)LLLTVLDHDR2	7648.21	18049.4	12197.9
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	DGACLLLTVLDHDR	DGAC(UniMod:4)LLLTVLDHDR	3	DGAC(UniMod:4)LLLTVLDHDR3	69038.4	72654.3	69441.2
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	DGACLLLTVLDHDRLGADDLEGEAFLPLCR	DGAC(UniMod:4)LLLTVLDHDRLGADDLEGEAFLPLC(UniMod:4)R	4	DGAC(UniMod:4)LLLTVLDHDRLGADDLEGEAFLPLC(UniMod:4)R4	66662.4	56181.4	43756.5
P05065	P09117;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	DGADFAK	DGADFAK	1	DGADFAK1	5546.83		5489.57
Q66HA4	Q66HA4	TAXB1_RAT	Tax1bp1	Tax1-binding protein 1 homolog	1	DGADGAFYPDEIQRPPVR	DGADGAFYPDEIQRPPVR	3	DGADGAFYPDEIQRPPVR3	27352.6	38456.8	38643.5
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	DGAESVLTVK	DGAESVLTVK	2	DGAESVLTVK2	177201	196574	258078
P01048	P08932;A0A0G2KA54;P01048	KNT1_RAT	Map1	T-kininogen 1	0	DGAETLYSFK	DGAETLYSFK	2	DGAETLYSFK2	356665	294132	333054
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	DGAFAEFVR	DGAFAEFVR	2	DGAFAEFVR2	6920.5	10025.2	6080.39
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	DGAFLIR	DGAFLIR	2	DGAFLIR2	105968	99332.1	112645
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	DGAGDPSVVLTVDGK	DGAGDPSVVLTVDGK	2	DGAGDPSVVLTVDGK2	311249	296477	290354
Q62985	Q62985	SH2B1_RAT	Sh2b1	SH2B adapter protein 1	1	DGAGVIQR	DGAGVIQR	2	DGAGVIQR2	35606.4		34575.1
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	DGAHSGDHNSATEEDEPPISK	DGAHSGDHNSATEEDEPPISK	3	DGAHSGDHNSATEEDEPPISK3	7095.7	4393.54	4545.51
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	DGAHSGDHNSATEEDEPPISK	DGAHSGDHNSATEEDEPPISK	4	DGAHSGDHNSATEEDEPPISK4	30914.8	42386.9	34920.1
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	DGALDEENKPGR	DGALDEENKPGR	2	DGALDEENKPGR2	3597.18	1099.34	
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	DGALDEENKPGR	DGALDEENKPGR	3	DGALDEENKPGR3	24934.3	22813	28199.6
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	DGALHLETR	DGALHLETR	2	DGALHLETR2	3761.34	5415.23	7770.89
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	DGALHMIGSLAEILLK	DGALHMIGSLAEILLK	3	DGALHMIGSLAEILLK3	7940.47		
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	DGALICTSCR	DGALIC(UniMod:4)TSC(UniMod:4)R	2	DGALIC(UniMod:4)TSC(UniMod:4)R2	1.18932e+06	1.14035e+06	1.22869e+06
Q9QZR8	Q9QZR8	PDZD2_RAT	Pdzd2	PDZ domain-containing protein 2	1	DGALLEDTAPASGK	DGALLEDTAPASGK	2	DGALLEDTAPASGK2	6074.65	6451.31	8720.44
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	DGALTQLNVAFSR	DGALTQLNVAFSR	2	DGALTQLNVAFSR2	23438.1	30315.2	17834.3
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	DGAPFCPECYFER	DGAPFC(UniMod:4)PEC(UniMod:4)YFER	2	DGAPFC(UniMod:4)PEC(UniMod:4)YFER2	492062	492324	525597
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	DGASRGDLPGDSR	DGASRGDLPGDSR	2	DGASRGDLPGDSR2	40658.7	62712.4	78339.4
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	DGASRGDLPGDSR	DGASRGDLPGDSR	3	DGASRGDLPGDSR3	1.03581e+06	72338.8	71584.4
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	DGASRGDLPGDSRGDSATR	DGASRGDLPGDSRGDSATR	4	DGASRGDLPGDSRGDSATR4	22505.3	46812.7	60539.9
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	DGATLILSK	DGATLILSK	2	DGATLILSK2	11993	9166.21	
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	DGATVGTACK	DGATVGTAC(UniMod:4)K	1	DGATVGTAC(UniMod:4)K1	1947.37	2009.52	1682.82
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	DGATVGTACK	DGATVGTAC(UniMod:4)K	2	DGATVGTAC(UniMod:4)K2	24589.1	44283.5	43973.7
Q9QZK8	Q9QZK8	DNS2A_RAT	Dnase2	Deoxyribonuclease-2-alpha	1	DGAVGLTLQPLYQK	DGAVGLTLQPLYQK	2	DGAVGLTLQPLYQK2	15471	10110.8	9718.69
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	DGAWGAFR	DGAWGAFR	2	DGAWGAFR2	54407.6	42595.2	39233.5
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	DGAWSNK	DGAWSNK	2	DGAWSNK2	41090.8	38492.4	35851.3
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	DGAWSNKIPTCK	DGAWSNKIPTC(UniMod:4)K	2	DGAWSNKIPTC(UniMod:4)K2	117973	189726	175056
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	DGAWSNKIPTCK	DGAWSNKIPTC(UniMod:4)K	3	DGAWSNKIPTC(UniMod:4)K3	750015	1.11325e+06	1.20829e+06
O70595	O70595	ABCB6_RAT	Abcb6	ATP-binding cassette sub-family B member 6	1	DGCIIER	DGC(UniMod:4)IIER	2	DGC(UniMod:4)IIER2	30680.1	26652.8	35618.4
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	DGCILGYK	DGC(UniMod:4)ILGYK	1	DGC(UniMod:4)ILGYK1	4591.2	5361.62	5527.58
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	DGCILGYK	DGC(UniMod:4)ILGYK	2	DGC(UniMod:4)ILGYK2	178502	185129	183178
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	DGCLFEADFILLDGIPANVIR	DGC(UniMod:4)LFEADFILLDGIPANVIR	3	DGC(UniMod:4)LFEADFILLDGIPANVIR3	10376.1	634.714	
Q6V0K7	Q6V0K7	OIT3_RAT	Oit3	Oncoprotein-induced transcript 3 protein	1	DGCVSDDSVK	DGC(UniMod:4)VSDDSVK	2	DGC(UniMod:4)VSDDSVK2	109126	113253	113506
F7FE56	F7FE56	F7FE56_RAT	Tpd52l1	TPD52 like 1	1	DGDAIGSADLSSMLSEEEK	DGDAIGSADLSSMLSEEEK	2	DGDAIGSADLSSMLSEEEK2	3014.8	3857.81	
F7FE56	F7FE56	F7FE56_RAT	Tpd52l1	TPD52 like 1	1	DGDAIGSADLSSMLSEEEKDELK	DGDAIGSADLSSMLSEEEKDELK	3	DGDAIGSADLSSMLSEEEKDELK3	14225.9	9677.67	10911.2
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	DGDAPLTAAGVDLPGTAVLSGR	DGDAPLTAAGVDLPGTAVLSGR	3	DGDAPLTAAGVDLPGTAVLSGR3	11398.1	16919.7	5638.14
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	DGDAQSLK	DGDAQSLK	1	DGDAQSLK1	5214.64	1723.37	
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	DGDAQSLK	DGDAQSLK	2	DGDAQSLK2	60971.4	90654.7	84577.6
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	DGDDEIELK	DGDDEIELK	2	DGDDEIELK2	1167.48	1144.34	3773.82
G3V8S6	G3V8S6	G3V8S6_RAT	Hrc	Histidine rich calcium binding protein	1	DGDEDISTEFGHK	DGDEDISTEFGHK	2	DGDEDISTEFGHK2	4638.68	2799.19	4865.8
G3V8S6	G3V8S6	G3V8S6_RAT	Hrc	Histidine rich calcium binding protein	1	DGDEDISTEFGHK	DGDEDISTEFGHK	3	DGDEDISTEFGHK3	13980.4	4320.65	6449.29
Q78EJ9	Q78EJ9	CAN8_RAT	Capn8	Calpain-8	1	DGDFCLR	DGDFC(UniMod:4)LR	2	DGDFC(UniMod:4)LR2	1.25513e+06	1.38889e+06	1.4284e+06
P52555	P52555	ERP29_RAT	Erp29	Endoplasmic reticulum resident protein 29	1	DGDFENPVPYSGAVK	DGDFENPVPYSGAVK	2	DGDFENPVPYSGAVK2	46129.6	38379.9	41458.3
P0DP29;P0DP30;P0DP31	P0DP30;A0A8I6GKN5;P0DP29;P0DP31	CALM1_RAT;CALM2_RAT;CALM3_RAT	Calm1;Calm2;Calm3	Calmodulin-1	0	DGDGTITTK	DGDGTITTK	1	DGDGTITTK1	29692.5	32814.5	17767.2
P0DP29;P0DP30;P0DP31	P0DP30;A0A8I6GKN5;P0DP29;P0DP31	CALM1_RAT;CALM2_RAT;CALM3_RAT	Calm1;Calm2;Calm3	Calmodulin-1	0	DGDGTITTK	DGDGTITTK	2	DGDGTITTK2	31545	38973.7	44835.4
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	DGDGWTPLHAAAHWGVEDACR	DGDGWTPLHAAAHWGVEDAC(UniMod:4)R	4	DGDGWTPLHAAAHWGVEDAC(UniMod:4)R4	6282.81	3606.53	7512.8
P26772	P26772	CH10_RAT	Hspe1	10 kDa heat shock protein, mitochondrial	1	DGDILGK	DGDILGK	1	DGDILGK1	16730.5	19070.2	16840.3
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	DGDLFMSYR	DGDLFMSYR	2	DGDLFMSYR2	59473	70403	68503.6
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	DGDPPMPTTGVILPSGNTLR	DGDPPMPTTGVILPSGNTLR	3	DGDPPMPTTGVILPSGNTLR3	13628.1	28359.7	23510.2
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	DGDSESADLLGK	DGDSESADLLGK	2	DGDSESADLLGK2	86394.2	84721.5	86048.4
P51111	P51111	HD_RAT	Htt	Huntingtin	1	DGDSNPTLGER	DGDSNPTLGER	2	DGDSNPTLGER2	34013.9	34481.6	32367.3
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	DGDVTVTNDGATILSMMDVDHQIAK	DGDVTVTNDGATILSMMDVDHQIAK	3	DGDVTVTNDGATILSMMDVDHQIAK3	17363.1	17770.9	20659.6
A0A8I5Y0Y2	A0A8I5Y0Y2	A0A8I5Y0Y2_RAT	Ddi2	DNA damage inducible 1 homolog 2	1	DGDVVILR	DGDVVILR	2	DGDVVILR2	14083.4	7816.73	13917.4
A0A8I6ASC6	A0A8I6ASC6	A0A8I6ASC6_RAT	Igdcc4	Immunoglobulin superfamily, DCC subclass, member 4	1	DGDVVLER	DGDVVLER	2	DGDVVLER2	31109.3	29193.7	18946.1
D4A164	D4A164	D4A164_RAT	Nebl	Nebulette	1	DGDYIVNVQPIDDGWMYGTVQR	DGDYIVNVQPIDDGWMYGTVQR	3	DGDYIVNVQPIDDGWMYGTVQR3	10488.8	3092.92	4543.6
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	DGEAEVAQEAVPQEASSDGPR	DGEAEVAQEAVPQEASSDGPR	3	DGEAEVAQEAVPQEASSDGPR3	102538	110949	101537
P30349	P30349	LKHA4_RAT	Lta4h	Leukotriene A-4 hydrolase	1	DGEAPDPEDPSRK	DGEAPDPEDPSRK	3	DGEAPDPEDPSRK3	5490.03	12718.3	
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	DGEATLEVDGTK	DGEATLEVDGTK	2	DGEATLEVDGTK2	13158.6	22399.8	13444.1
P70645	P70645	BLMH_RAT	Blmh	Bleomycin hydrolase	1	DGEAVWFGCDVGK	DGEAVWFGC(UniMod:4)DVGK	2	DGEAVWFGC(UniMod:4)DVGK2	44600.1	29035.9	31323.5
B4F795	B4F795	CTL2_RAT	Slc44a2	Choline transporter-like protein 2	1	DGECPAVIIPSK	DGEC(UniMod:4)PAVIIPSK	2	DGEC(UniMod:4)PAVIIPSK2	3641.28	4290.43	3672.57
B4F795	B4F795	CTL2_RAT	Slc44a2	Choline transporter-like protein 2	1	DGECPAVIIPSKPLAQR	DGEC(UniMod:4)PAVIIPSKPLAQR	2	DGEC(UniMod:4)PAVIIPSKPLAQR2	31034.4	34993.5	23495.1
B4F795	B4F795	CTL2_RAT	Slc44a2	Choline transporter-like protein 2	1	DGECPAVIIPSKPLAQR	DGEC(UniMod:4)PAVIIPSKPLAQR	3	DGEC(UniMod:4)PAVIIPSKPLAQR3	425025	486774	492132
A0A8I5ZT10	A0A8I5ZT10	A0A8I5ZT10_RAT	Ccm2	CCM2 scaffold protein	1	DGEDIILR	DGEDIILR	2	DGEDIILR2	17745.4	19035.3	21663.7
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	DGEDLMDESVLK	DGEDLMDESVLK	2	DGEDLMDESVLK2	24119.4	30443.3	16562.6
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	DGEDSDLSK	DGEDSDLSK	2	DGEDSDLSK2	23931.8	25108.7	30244.8
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	DGEEAGAYDGPR	DGEEAGAYDGPR	2	DGEEAGAYDGPR2	437089	405037	350375
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	DGEITGLSGR	DGEITGLSGR	2	DGEITGLSGR2	199889	175664	204041
P47875	P47875	CSRP1_RAT	Csrp1	Cysteine and glycine-rich protein 1	1	DGEIYCK	DGEIYC(UniMod:4)K	2	DGEIYC(UniMod:4)K2	47384.3	32719.5	42573.6
Q562C7	M0R548;Q562C7	PUM3_RAT	Pum3	Pumilio homolog 3	0	DGELHIAEHPAGHLVLK	DGELHIAEHPAGHLVLK	4	DGELHIAEHPAGHLVLK4	5929.41	4507.7	
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	DGELLFVHSAEGSEFWSALLEK	DGELLFVHSAEGSEFWSALLEK	3	DGELLFVHSAEGSEFWSALLEK3	68483.2	75716.8	73651.2
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	DGELPTSK	DGELPTSK	2	DGELPTSK2	40494.6	32297.3	40441
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	DGELPVEDDIDLSDVELDDLEKDEL	DGELPVEDDIDLSDVELDDLEKDEL	3	DGELPVEDDIDLSDVELDDLEKDEL3	47976.8	56029.9	44327.2
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	DGELYMFGK	DGELYMFGK	2	DGELYMFGK2	18934.2	15694.1	24038.7
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	DGENLENNMESLR	DGENLENNMESLR	2	DGENLENNMESLR2	310902	294377	332130
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	DGENLENNMESLR	DGENLENNMESLR	3	DGENLENNMESLR3	11715.1		15965.6
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	DGENYVVLLDSTLPR	DGENYVVLLDSTLPR	2	DGENYVVLLDSTLPR2	17313.1	12478.8	16142.8
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	DGENYVVLLDSTLPR	DGENYVVLLDSTLPR	3	DGENYVVLLDSTLPR3	3947.39		
Q499T5	Q499T5	Q499T5_RAT	Capn7	Calpain 7	1	DGEPEYNPCGK	DGEPEYNPC(UniMod:4)GK	2	DGEPEYNPC(UniMod:4)GK2	11488.8	13171.8	6094.14
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	DGEPIENEEEDDEK	DGEPIENEEEDDEK	2	DGEPIENEEEDDEK2	959953	933471	930230
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	DGEPIENEEEDDEKHIFSDDSSELTIR	DGEPIENEEEDDEKHIFSDDSSELTIR	4	DGEPIENEEEDDEKHIFSDDSSELTIR4	275756	320643	313725
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	DGEPLLPQSLEQGPGLK	DGEPLLPQSLEQGPGLK	2	DGEPLLPQSLEQGPGLK2	16331.5	13910.1	7321.65
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	DGEPPMPVTGAVLPSGNTLR	DGEPPMPVTGAVLPSGNTLR	3	DGEPPMPVTGAVLPSGNTLR3	17431.4	20120.3	25060.2
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	DGEPTASES	DGEPTASES	1	DGEPTASES1	76449.5	63148.1	51470
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	DGEPVQGLTK	DGEPVQGLTK	2	DGEPVQGLTK2	12407.8	13086.3	13943.2
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	DGEQHEDLNEVAK	DGEQHEDLNEVAK	2	DGEQHEDLNEVAK2	1895.99	2347.64	
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	DGEQHEDLNEVAK	DGEQHEDLNEVAK	3	DGEQHEDLNEVAK3	61609.9	50533.4	46895.1
Q9EQG6	Q9EQG6	KDIS_RAT	Kidins220	Kinase D-interacting substrate of 220 kDa	1	DGETPLIK	DGETPLIK	2	DGETPLIK2	5578.98		4417.33
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	DGEWWTGSIGER	DGEWWTGSIGER	2	DGEWWTGSIGER2	6298.84	9268.23	7010.19
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	DGEYIDEQGHCQICDASCAK	DGEYIDEQGHC(UniMod:4)QIC(UniMod:4)DASC(UniMod:4)AK	3	DGEYIDEQGHC(UniMod:4)QIC(UniMod:4)DASC(UniMod:4)AK3	55297.6	58055.7	51942
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	DGFAGEDCNEPLCFNNCNNR	DGFAGEDC(UniMod:4)NEPLC(UniMod:4)FNNC(UniMod:4)NNR	3	DGFAGEDC(UniMod:4)NEPLC(UniMod:4)FNNC(UniMod:4)NNR3	148350	150593	156811
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	DGFFGLSASNPR	DGFFGLSASNPR	2	DGFFGLSASNPR2	9994.21	9992.63	7991.13
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	DGFFHIAENR	DGFFHIAENR	2	DGFFHIAENR2	10507.2	9286.04	7952.94
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	DGFFHIAENR	DGFFHIAENR	3	DGFFHIAENR3	50573.6	63995	42812.8
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	DGFFHIAENRK	DGFFHIAENRK	3	DGFFHIAENRK3	33895.1	31731	32065
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	DGFGTVLFSSHVR	DGFGTVLFSSHVR	3	DGFGTVLFSSHVR3	25771.6	14830.7	23633.3
Q64122	Q64122;P18666	MYL9_RAT	Myl9	Myosin regulatory light polypeptide 9	0	DGFIDKEDLHDMLASLGK	DGFIDKEDLHDMLASLGK	3	DGFIDKEDLHDMLASLGK3	138530	120428	124315
Q64122	Q64122;P18666	MYL9_RAT	Myl9	Myosin regulatory light polypeptide 9	0	DGFIDKEDLHDMLASLGK	DGFIDKEDLHDMLASLGK	4	DGFIDKEDLHDMLASLGK4	79144.3	112896	108556
P13832	P13832	MRLCA_RAT	Rlc-a	Myosin regulatory light chain RLC-A	1	DGFIDKEDLHDMLASMGK	DGFIDKEDLHDMLASMGK	3	DGFIDKEDLHDMLASMGK3	87264.4	68538.4	100613
P13832	P13832	MRLCA_RAT	Rlc-a	Myosin regulatory light chain RLC-A	1	DGFIDKEDLHDMLASMGK	DGFIDKEDLHDMLASMGK	4	DGFIDKEDLHDMLASMGK4	53771.5	51545.2	62385.1
Q4FZY0	D4A9T5;Q4FZY0	EFHD2_RAT	Efhd2	EF-hand domain-containing protein D2	0	DGFIDLMELK	DGFIDLMELK	2	DGFIDLMELK2	51906.9	70981	58907.9
Q2KMM2	Q2KMM2	TPPC1_RAT	Trappc1	Trafficking protein particle complex subunit 1	1	DGFLSFQTSR	DGFLSFQTSR	2	DGFLSFQTSR2	55007.8	49372	54001.4
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	DGFLTETGK	DGFLTETGK	2	DGFLTETGK2	32298.5	23294.9	27156.7
Q64303	Q64303	PAK2_RAT	Pak2	Serine/threonine-protein kinase PAK 2	1	DGFPSGTPALNTK	DGFPSGTPALNTK	2	DGFPSGTPALNTK2	20104.5	11894.5	24850.8
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	DGFQCGPCPDGYTGNGITCSDVDECK	DGFQC(UniMod:4)GPC(UniMod:4)PDGYTGNGITC(UniMod:4)SDVDEC(UniMod:4)K	3	DGFQC(UniMod:4)GPC(UniMod:4)PDGYTGNGITC(UniMod:4)SDVDEC(UniMod:4)K3	65332.9	50797.3	41616.9
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	DGFSCSDIDECSYSSYLCQYR	DGFSC(UniMod:4)SDIDEC(UniMod:4)SYSSYLC(UniMod:4)QYR	3	DGFSC(UniMod:4)SDIDEC(UniMod:4)SYSSYLC(UniMod:4)QYR3	92788.2	101262	103845
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	DGFSLASQLK	DGFSLASQLK	2	DGFSLASQLK2	12901.7	11671.1	13139.7
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	DGFVALSK	DGFVALSK	2	DGFVALSK2	20788.7	23591.1	14179.8
Q5XIE1	Q5XIE1	THEM6_RAT	Them6	Protein THEM6	1	DGFVCALLR	DGFVC(UniMod:4)ALLR	2	DGFVC(UniMod:4)ALLR2	19835.2	19624.1	26701.7
Q5M872	Q5M872	DPEP2_RAT	Dpep2	Dipeptidase 2	1	DGFVGAQFWSAYVPCQTQDRDALR	DGFVGAQFWSAYVPC(UniMod:4)QTQDRDALR	3	DGFVGAQFWSAYVPC(UniMod:4)QTQDRDALR3	7985.73	6196.25	6393.02
A0A8I6A5H5	A0A8I6A5H5	A0A8I6A5H5_RAT	Rela	RELA proto-oncogene, NF-kB subunit	1	DGFYEAELCPDR	DGFYEAELC(UniMod:4)PDR	2	DGFYEAELC(UniMod:4)PDR2	6326.9	9053.62	9647.95
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	DGFYSATQETVAK	DGFYSATQETVAK	2	DGFYSATQETVAK2	693624	561890	535430
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	DGGAASPATEGR	DGGAASPATEGR	2	DGGAASPATEGR2	23166.7		25783.3
Q5FVN1	Q5FVN1	STBD1_RAT	Stbd1	Starch-binding domain-containing protein 1	1	DGGAEPLK	DGGAEPLK	2	DGGAEPLK2		3220.27	8600.64
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	DGGAHPELGSAFVTVHVR	DGGAHPELGSAFVTVHVR	3	DGGAHPELGSAFVTVHVR3	2471.26	1814.18	2565.52
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	DGGAHPELGSAFVTVHVR	DGGAHPELGSAFVTVHVR	4	DGGAHPELGSAFVTVHVR4	12858.2	10026.5	13962.6
A0A8I5ZUI2	A0A8I5ZUI2	A0A8I5ZUI2_RAT	Ano10	Anoctamin	1	DGGAQLLFR	DGGAQLLFR	2	DGGAQLLFR2	11476.9	6763.27	5063.87
A0A8I5ZUI2	A0A8I5ZUI2	A0A8I5ZUI2_RAT	Ano10	Anoctamin	1	DGGAQLLFRPLLNK	DGGAQLLFRPLLNK	3	DGGAQLLFRPLLNK3		4464.54	
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	DGGCCGGSGNNPNCCMNQTK	DGGC(UniMod:4)C(UniMod:4)GGSGNNPNC(UniMod:4)C(UniMod:4)MNQTK	3	DGGC(UniMod:4)C(UniMod:4)GGSGNNPNC(UniMod:4)C(UniMod:4)MNQTK3	7237.83	12075	5329.95
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	DGGCNHMVCR	DGGC(UniMod:4)NHMVC(UniMod:4)R	2	DGGC(UniMod:4)NHMVC(UniMod:4)R2	5051.61	10891.7	10052.7
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	DGGCNHMVCR	DGGC(UniMod:4)NHMVC(UniMod:4)R	3	DGGC(UniMod:4)NHMVC(UniMod:4)R3	40771.8	50475.4	58403.7
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	DGGFLLMHTVLK	DGGFLLMHTVLK	3	DGGFLLMHTVLK3	10721.7	1593.82	5872.22
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	DGGGDVAFVK	DGGGDVAFVK	1	DGGGDVAFVK1	40302.4	47358.9	39912.6
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	DGGGDVAFVK	DGGGDVAFVK	2	DGGGDVAFVK2	29849.1	24879.1	22338.5
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	DGGGMNSITVK	DGGGMNSITVK	2	DGGGMNSITVK2	19108.7	19186.7	31513.4
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	DGGGRGPDELEGPDSK	DGGGRGPDELEGPDSK	3	DGGGRGPDELEGPDSK3	19895.2	20941.1	28409.9
P58751	P58751	RELN_RAT	Reln	Reelin	1	DGGITWTLLHEMDFQK	DGGITWTLLHEMDFQK	2	DGGITWTLLHEMDFQK2		4329.4	3435.16
P58751	P58751	RELN_RAT	Reln	Reelin	1	DGGITWTLLHEMDFQK	DGGITWTLLHEMDFQK	3	DGGITWTLLHEMDFQK3	34183.1	43615.9	50484.1
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	DGGLQNMELHGMIMLR	DGGLQNMELHGMIMLR	2	DGGLQNMELHGMIMLR2	3714.03	2960.6	
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	DGGLQNMELHGMIMLR	DGGLQNMELHGMIMLR	3	DGGLQNMELHGMIMLR3	87424.9	70376.6	63320.6
A0A8I5ZW56	A0A8I5ZW56	A0A8I5ZW56_RAT	Clec16a	C-type lectin domain containing 16A	1	DGGMVQR	DGGMVQR	2	DGGMVQR2	11417.4		
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	DGGNPAFSAEVLVPITVMNK	DGGNPAFSAEVLVPITVMNK	3	DGGNPAFSAEVLVPITVMNK3	3015.5	3860.67	4985.03
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	DGGNPLCTR	DGGNPLC(UniMod:4)TR	2	DGGNPLC(UniMod:4)TR2	15053.2	24043.9	13622.4
D3ZHQ1	D3ZHQ1	D3ZHQ1_RAT	Dpp8	Dipeptidylpeptidase 8	1	DGGPHGFTQQPLRPNLVETSCPNIR	DGGPHGFTQQPLRPNLVETSC(UniMod:4)PNIR	4	DGGPHGFTQQPLRPNLVETSC(UniMod:4)PNIR4	7164.43	7917.84	14329.2
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	DGGQTTPASTR	DGGQTTPASTR	2	DGGQTTPASTR2			499107
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	DGGQYALVAACAAGGQGHAMIVEAYPK	DGGQYALVAAC(UniMod:4)AAGGQGHAMIVEAYPK	3	DGGQYALVAAC(UniMod:4)AAGGQGHAMIVEAYPK3	14827.6	16432.7	16271.3
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	DGGSAVTIDLSGFNEK	DGGSAVTIDLSGFNEK	2	DGGSAVTIDLSGFNEK2	17678	19090	13060.4
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	DGGSGNSTIIVSR	DGGSGNSTIIVSR	2	DGGSGNSTIIVSR2	9085.04	17313.7	14266.5
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	DGGSGVPPAGPGAASEALAVLTSFGR	DGGSGVPPAGPGAASEALAVLTSFGR	3	DGGSGVPPAGPGAASEALAVLTSFGR3	63344.2	43995.4	66763
P21775	P07871;P21775	THIKA_RAT	Acaa1a	3-ketoacyl-CoA thiolase A, peroxisomal	0	DGGSTTAGNSSQVSDGAAAVLLAR	DGGSTTAGNSSQVSDGAAAVLLAR	3	DGGSTTAGNSSQVSDGAAAVLLAR3	19759.8	15209.1	18478.7
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	DGGSVVGASVFYK	DGGSVVGASVFYK	2	DGGSVVGASVFYK2	33226	22685.7	33426.1
B3DMA2	B3DMA2	ACD11_RAT	Acad11	Acyl-CoA dehydrogenase family member 11	1	DGGSYIVHGK	DGGSYIVHGK	2	DGGSYIVHGK2	5317.2	3402.76	5100.61
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	DGGVCLLSGSK	DGGVC(UniMod:4)LLSGSK	2	DGGVC(UniMod:4)LLSGSK2	37021.1	27191.4	30699.4
P08753	P08753	GNAI3_RAT	Gnai3	Guanine nucleotide-binding protein G(i) subunit alpha-3	1	DGGVQACFSR	DGGVQAC(UniMod:4)FSR	2	DGGVQAC(UniMod:4)FSR2	166435	178633	170277
Q9JK25	Q9JK25	CLIP1_RAT	Clip1	CAP-Gly domain-containing linker protein 1	1	DGHDQHVLELEAK	DGHDQHVLELEAK	3	DGHDQHVLELEAK3	3492.63	1421.61	1505.24
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	DGHFTLFAPTNEAFEK	DGHFTLFAPTNEAFEK	3	DGHFTLFAPTNEAFEK3	41624.9	29737.1	30178.6
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	DGHLLMDGGYINNLPADIAR	DGHLLMDGGYINNLPADIAR	3	DGHLLMDGGYINNLPADIAR3	12583	11874.1	6213.76
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	DGHPITDELLEK	DGHPITDELLEK	2	DGHPITDELLEK2	4353.6	3613.72	
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	DGHPITDELLEK	DGHPITDELLEK	3	DGHPITDELLEK3	6951.07	6042.16	10922.5
Q6TUG0	Q6TUG0	DJB11_RAT	Dnajb11	DnaJ homolog subfamily B member 11	1	DGHQSSHGDIFSHFFGDFGFMFGGAPR	DGHQSSHGDIFSHFFGDFGFMFGGAPR	4	DGHQSSHGDIFSHFFGDFGFMFGGAPR4	20889.1	16527.5	16647.6
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	DGHSESSNLIGR	DGHSESSNLIGR	3	DGHSESSNLIGR3	31682.8	27566.7	31754.9
Q642G4	Q642G4	PEX14_RAT	Pex14	Peroxisomal membrane protein PEX14	1	DGHSPEGSTATYR	DGHSPEGSTATYR	2	DGHSPEGSTATYR2	5474.31	3287.74	
Q642G4	Q642G4	PEX14_RAT	Pex14	Peroxisomal membrane protein PEX14	1	DGHSPEGSTATYR	DGHSPEGSTATYR	3	DGHSPEGSTATYR3	7552.05	11572	7763.97
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DGHVSLQEYMAFMISR	DGHVSLQEYMAFMISR	3	DGHVSLQEYMAFMISR3	8065.85	13812	16684.6
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	DGHYQTVQCQMER	DGHYQTVQC(UniMod:4)QMER	3	DGHYQTVQC(UniMod:4)QMER3	23088.5	41197.7	28334.5
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	DGIEALSSR	DGIEALSSR	2	DGIEALSSR2	23881.9	32081.3	19220.1
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	DGIEALSSRPFR	DGIEALSSRPFR	3	DGIEALSSRPFR3	28229.2	33232.6	39210.4
P97532	P97532	THTM_RAT	Mpst	3-mercaptopyruvate sulfurtransferase	1	DGIEPGHIPGSVNIPFTEFLTSEGLEK	DGIEPGHIPGSVNIPFTEFLTSEGLEK	3	DGIEPGHIPGSVNIPFTEFLTSEGLEK3	24181.7	33374.4	29984.6
P63074	P63074;A0A8I6G664	IF4E_RAT	Eif4e	Eukaryotic translation initiation factor 4E	0	DGIEPMWEDEK	DGIEPMWEDEK	2	DGIEPMWEDEK2	22951.7	28271.2	21544.5
P63074	P63074;A0A8I6G664	IF4E_RAT	Eif4e	Eukaryotic translation initiation factor 4E	0	DGIEPMWEDEKNK	DGIEPMWEDEKNK	3	DGIEPMWEDEKNK3	28047.8	13696	18807.9
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	DGIGDACDDDDDNDK	DGIGDAC(UniMod:4)DDDDDNDK	2	DGIGDAC(UniMod:4)DDDDDNDK2	11179.2		
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	DGIGDACDDDDDNDKIPDDR	DGIGDAC(UniMod:4)DDDDDNDKIPDDR	3	DGIGDAC(UniMod:4)DDDDDNDKIPDDR3	95275.6	67705.5	89923.5
Q05695	Q05695	L1CAM_RAT	L1cam	Neural cell adhesion molecule L1	1	DGIHFKPK	DGIHFKPK	2	DGIHFKPK2	3836.23		
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	DGIHLVPELYAIPPDK	DGIHLVPELYAIPPDK	3	DGIHLVPELYAIPPDK3	284175	290624	323604
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	DGIHNLENITFTK	DGIHNLENITFTK	2	DGIHNLENITFTK2	12499.2	10590.5	7453.02
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	DGIHNLENITFTK	DGIHNLENITFTK	3	DGIHNLENITFTK3	32070.4	30004.1	36457.9
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	DGIHNVEGVAVDWMGDNLYWTDDGPK	DGIHNVEGVAVDWMGDNLYWTDDGPK	3	DGIHNVEGVAVDWMGDNLYWTDDGPK3	17928.5	20623.6	14424
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	DGIHNVEGVAVDWMGDNLYWTDDGPKK	DGIHNVEGVAVDWMGDNLYWTDDGPKK	4	DGIHNVEGVAVDWMGDNLYWTDDGPKK4	26723.5	25667.1	24234
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	DGIIDFTSGSELLITK	DGIIDFTSGSELLITK	2	DGIIDFTSGSELLITK2	50042.3	50762.1	66294.6
P04466	P04466	MYL11_RAT	Myl11	Myosin regulatory light chain 11	1	DGIIDKEDLR	DGIIDKEDLR	3	DGIIDKEDLR3	8902.86	13732.7	7650.35
Q5RK27	Q5RK27	S12A7_RAT	Slc12a7	Solute carrier family 12 member 7	1	DGIIPFLQVFGHGK	DGIIPFLQVFGHGK	2	DGIIPFLQVFGHGK2		2548.82	
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	DGILFWTDWDASLPR	DGILFWTDWDASLPR	2	DGILFWTDWDASLPR2	13552.7	4999.57	4407.93
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	DGILSEWSGR	DGILSEWSGR	2	DGILSEWSGR2	35388.5	36772	26798.4
D3ZU83	D3ZU83	D3ZU83_RAT	Ergic3	Endoplasmic reticulum-Golgi intermediate compartment protein	1	DGIPVSSEAER	DGIPVSSEAER	2	DGIPVSSEAER2	31660	21591.4	26557.9
D3ZU83	D3ZU83	D3ZU83_RAT	Ergic3	Endoplasmic reticulum-Golgi intermediate compartment protein	1	DGIPVSSEAERHELGK	DGIPVSSEAERHELGK	4	DGIPVSSEAERHELGK4	8651.94	14611.5	10022.6
Q9QZH7	Q9QZH7	FXL20_RAT	Fbxl20	F-box/LRR-repeat protein 20	1	DGIQALVR	DGIQALVR	2	DGIQALVR2	13256.4	11913.5	17593
Q9JHW0	Q9JHW0	PSB7_RAT	Psmb7	Proteasome subunit beta type-7	1	DGIVLGADTR	DGIVLGADTR	2	DGIVLGADTR2	912827	1.06675e+06	867986
A0A8I6AE33	A0A8I6AE33	A0A8I6AE33_RAT	Wdr37	WD repeat domain 37	1	DGIWDVSVAR	DGIWDVSVAR	2	DGIWDVSVAR2	101838	95007.7	76114.5
Q99PD4	Q99PD4	ARC1A_RAT	Arpc1a	Actin-related protein 2/3 complex subunit 1A	1	DGIWKPTLVILR	DGIWKPTLVILR	2	DGIWKPTLVILR2	24632.8	17861.5	20258
Q99PD4	Q99PD4	ARC1A_RAT	Arpc1a	Actin-related protein 2/3 complex subunit 1A	1	DGIWKPTLVILR	DGIWKPTLVILR	3	DGIWKPTLVILR3	58274.7	74182.3	80835.6
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	DGKLPLLLSR	DGKLPLLLSR	2	DGKLPLLLSR2	21667.9	35285.4	30684
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	DGKPLLPEPEETSK	DGKPLLPEPEETSK	3	DGKPLLPEPEETSK3	19100.1	18114.7	16477.3
D3ZQL6	D3ZQL6;D3ZEN0	MILK1_RAT	Micall1	MICAL-like protein 1	0	DGLAFCAILHR	DGLAFC(UniMod:4)AILHR	2	DGLAFC(UniMod:4)AILHR2	18767.2	12398	13621.6
D3ZQL6	D3ZQL6;D3ZEN0	MILK1_RAT	Micall1	MICAL-like protein 1	0	DGLAFCAILHR	DGLAFC(UniMod:4)AILHR	3	DGLAFC(UniMod:4)AILHR3	78059.1	64204.2	50096.1
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	DGLAFNALIHK	DGLAFNALIHK	2	DGLAFNALIHK2	27361.2	18646	25007.7
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	DGLAFNALIHK	DGLAFNALIHK	3	DGLAFNALIHK3	50994.1	49602.3	43455.1
Q9QXQ0	Q9QXQ0;A0A0G2K677	ACTN4_RAT	Actn4	Alpha-actinin-4	0	DGLAFNALIHR	DGLAFNALIHR	2	DGLAFNALIHR2	71650.3	85109.1	59916.4
Q9QXQ0	Q9QXQ0;A0A0G2K677	ACTN4_RAT	Actn4	Alpha-actinin-4	0	DGLAFNALIHR	DGLAFNALIHR	3	DGLAFNALIHR3	9988.43	14874.9	4692.57
Q8R4I6	Q8R4I6	Q8R4I6_RAT	Actn3	Actinin alpha 3	1	DGLALCALIHR	DGLALC(UniMod:4)ALIHR	2	DGLALC(UniMod:4)ALIHR2	409.346	6637.66	6833.22
Q3ZAU4	Q3ZAU4	Q3ZAU4_RAT	Kazald1	Kazal-type serine peptidase inhibitor domain 1	1	DGLDIQLPGDDPHISVQFR	DGLDIQLPGDDPHISVQFR	3	DGLDIQLPGDDPHISVQFR3	16496.1	14200.6	9748.49
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	DGLEATALLHR	DGLEATALLHR	2	DGLEATALLHR2	19017	21384.1	13149.6
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	DGLEATALLHR	DGLEATALLHR	3	DGLEATALLHR3	57607.4	59192.5	53744.1
P63029	P63029;A0A8I6ALE5;A0A8I6GKA0	TCTP_RAT	Tpt1	Translationally-controlled tumor protein	0	DGLEMEK	DGLEMEK	2	DGLEMEK2	32585.9	35882.3	20942.3
P63029	P63029;A0A8I6ALE5;A0A8I6GKA0	TCTP_RAT	Tpt1	Translationally-controlled tumor protein	0	DGLEMEKC	DGLEMEKC(UniMod:4)	2	DGLEMEKC(UniMod:4)2	54973.4	58313.9	43226.8
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	DGLFDTIQR	DGLFDTIQR	2	DGLFDTIQR2	12455.8	15421.5	11698.1
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	DGLGFCALIHR	DGLGFC(UniMod:4)ALIHR	2	DGLGFC(UniMod:4)ALIHR2	30204.3	24895.1	722961
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	DGLGFCALIHR	DGLGFC(UniMod:4)ALIHR	3	DGLGFC(UniMod:4)ALIHR3	152864	123696	144907
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	DGLGGLPDIVR	DGLGGLPDIVR	2	DGLGGLPDIVR2	439678	453673	395232
A0A8I5ZN92	A0A8I5ZN92	A0A8I5ZN92_RAT	Actn2	Actinin alpha 2	1	DGLGLCALIHR	DGLGLC(UniMod:4)ALIHR	3	DGLGLC(UniMod:4)ALIHR3	11016.9	10108.8	12661
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	DGLGSYTCTCTEGFEGK	DGLGSYTC(UniMod:4)TC(UniMod:4)TEGFEGK	2	DGLGSYTC(UniMod:4)TC(UniMod:4)TEGFEGK2	171436	161935	158228
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	DGLGSYTCTCTEGFEGK	DGLGSYTC(UniMod:4)TC(UniMod:4)TEGFEGK	3	DGLGSYTC(UniMod:4)TC(UniMod:4)TEGFEGK3	18602.3	17332.5	20585.2
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	DGLGVIVR	DGLGVIVR	2	DGLGVIVR2	16033.8	19548.8	12695.5
O88767	O88767	PARK7_RAT	Park7	Parkinson disease protein 7 homolog	1	DGLILTSR	DGLILTSR	2	DGLILTSR2	61304.5	62815.2	72505
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	DGLIVYEDSPLVK	DGLIVYEDSPLVK	2	DGLIVYEDSPLVK2	14758	10484.8	14079.6
O55171	O55171	ACOT2_RAT	Acot2	Acyl-coenzyme A thioesterase 2, mitochondrial	1	DGLLDVVEALQSPLVDK	DGLLDVVEALQSPLVDK	2	DGLLDVVEALQSPLVDK2		5969.19	6524.39
O55171	O55171	ACOT2_RAT	Acot2	Acyl-coenzyme A thioesterase 2, mitochondrial	1	DGLLDVVEALQSPLVDKK	DGLLDVVEALQSPLVDKK	3	DGLLDVVEALQSPLVDKK3	16738.5	19090.7	22240.5
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	DGLLPEDTFIVGYAR	DGLLPEDTFIVGYAR	2	DGLLPEDTFIVGYAR2	126593	129587	115371
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	DGLLYHTR	DGLLYHTR	2	DGLLYHTR2	212026	173976	194475
Q62825	Q62825	EXOC3_RAT	Exoc3	Exocyst complex component 3	1	DGLMCEQYR	DGLMC(UniMod:4)EQYR	2	DGLMC(UniMod:4)EQYR2	22571.8	19118.1	21221.6
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	DGLNEAWADLLELIDTR	DGLNEAWADLLELIDTR	3	DGLNEAWADLLELIDTR3			8331.09
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	DGLPDNCR	DGLPDNC(UniMod:4)R	2	DGLPDNC(UniMod:4)R2	39519.6	47150.1	56922.4
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	DGLPFEASK	DGLPFEASK	2	DGLPFEASK2	75846.1	80754.5	68551.8
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	DGLPLALSQR	DGLPLALSQR	2	DGLPLALSQR2	13840.8	11578	15623.5
Q5XIA5	Q5XIA5	Q5XIA5_RAT	Coasy	Coenzyme A synthase	1	DGLSEAAAQSR	DGLSEAAAQSR	2	DGLSEAAAQSR2		8616.98	17464.3
Q5GH61	Q5GH61	XK_RAT	Xk	Endoplasmic reticulum membrane adapter protein XK	1	DGLSEEVEKEVGQSEGK	DGLSEEVEKEVGQSEGK	3	DGLSEEVEKEVGQSEGK3	32535.3	28870.2	25740.1
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	DGLSLQLR	DGLSLQLR	2	DGLSLQLR2	21229.7	11626.8	
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	DGLTDVYNK	DGLTDVYNK	2	DGLTDVYNK2	450128	419638	430307
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	DGLTISFTK	DGLTISFTK	2	DGLTISFTK2	112165	105794	111990
P08290	P08290	ASGR2_RAT	Asgr2	Asialoglycoprotein receptor 2	1	DGLTWAEADQYCQMENAHLLVINSR	DGLTWAEADQYC(UniMod:4)QMENAHLLVINSR	3	DGLTWAEADQYC(UniMod:4)QMENAHLLVINSR3	10818.1	8839.74	10141.6
Q6AYB2	Q6AYB2	Q6AYB2_RAT	Sphk2	Sphingosine kinase 2	1	DGLVPLDEVSGCGTLQSR	DGLVPLDEVSGC(UniMod:4)GTLQSR	2	DGLVPLDEVSGC(UniMod:4)GTLQSR2	21045.1	20480.3	20231.5
Q6AY84	Q6AY84	SCRN1_RAT	Scrn1	Secernin-1	1	DGLVVFGK	DGLVVFGK	2	DGLVVFGK2	12844.5	15137.9	4939.07
Q5FVN1	Q5FVN1	STBD1_RAT	Stbd1	Starch-binding domain-containing protein 1	1	DGLWSHSVFLPADTVVEWK	DGLWSHSVFLPADTVVEWK	3	DGLWSHSVFLPADTVVEWK3	8938.55		4715.52
D3ZZC5	D3ZZC5	D3ZZC5_RAT	Tradd	Tumor necrosis factor receptor type 1-associated DEATH domain protein	1	DGLYEQAFQLLR	DGLYEQAFQLLR	2	DGLYEQAFQLLR2	8808.25	6670.08	18694
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	DGMAFNALIHK	DGMAFNALIHK	2	DGMAFNALIHK2	120184	98842.1	107225
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	DGMAFNALIHK	DGMAFNALIHK	3	DGMAFNALIHK3	205316	234914	249548
D4ABK7	D4ABK7	D4ABK7_RAT	Hnrnph3	Heterogeneous nuclear ribonucleoprotein H3	1	DGMDNQGGYGSVGR	DGMDNQGGYGSVGR	2	DGMDNQGGYGSVGR2	2570.8	1645.73	
Q6TUG0	Q6TUG0	DJB11_RAT	Dnajb11	DnaJ homolog subfamily B member 11	1	DGMEYPFIGEGEPHVDGEPGDLR	DGMEYPFIGEGEPHVDGEPGDLR	3	DGMEYPFIGEGEPHVDGEPGDLR3	140993	133736	145146
Q8R491	Q8R491	EHD3_RAT	Ehd3	EH domain-containing protein 3	1	DGMLDDEEFALANHLIK	DGMLDDEEFALANHLIK	3	DGMLDDEEFALANHLIK3	16600.7	6156.13	9993.63
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	DGMPQCR	DGMPQC(UniMod:4)R	2	DGMPQC(UniMod:4)R2	47880.8	49758.5	43965.8
P14056	P14056	ARAF_RAT	Araf	Serine/threonine-protein kinase A-Raf	1	DGMSVYDSLDK	DGMSVYDSLDK	2	DGMSVYDSLDK2	37317.3	32607.7	43342.3
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	DGMTIAK	DGMTIAK	1	DGMTIAK1	3542.74	2562.22	2824.32
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	DGMTIAKEEIFGPVMQILK	DGMTIAKEEIFGPVMQILK	3	DGMTIAKEEIFGPVMQILK3	10297.3	13422.4	11098.7
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	DGMVLMGEGPPGSVHFAAVK	DGMVLMGEGPPGSVHFAAVK	3	DGMVLMGEGPPGSVHFAAVK3	15837.5	13565.4	16346.2
Q68FW9	Q68FW9	CSN3_RAT	Cops3	COP9 signalosome complex subunit 3	1	DGMVSFHDNPEK	DGMVSFHDNPEK	2	DGMVSFHDNPEK2	12439.4	15809.1	11534.3
Q68FW9	Q68FW9	CSN3_RAT	Cops3	COP9 signalosome complex subunit 3	1	DGMVSFHDNPEK	DGMVSFHDNPEK	3	DGMVSFHDNPEK3	181153	233717	214602
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	DGNAYNIHVDDDRECVK	DGNAYNIHVDDDREC(UniMod:4)VK	3	DGNAYNIHVDDDREC(UniMod:4)VK3	6704.07	1836.91	5903.29
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	DGNAYNIHVDDDRECVK	DGNAYNIHVDDDREC(UniMod:4)VK	4	DGNAYNIHVDDDREC(UniMod:4)VK4	4207.34	3595.72	4917.58
Q3KRD5	Q3KRD5	TOM34_RAT	Tomm34	Mitochondrial import receptor subunit TOM34	1	DGNCTDCIK	DGNC(UniMod:4)TDC(UniMod:4)IK	2	DGNC(UniMod:4)TDC(UniMod:4)IK2	2998.21	2206.83	5463.4
O35824	O35824	DNJA2_RAT	Dnaja2	DnaJ homolog subfamily A member 2	1	DGNDLHMTYK	DGNDLHMTYK	2	DGNDLHMTYK2	7269.37	6522.29	7105.58
O35824	O35824	DNJA2_RAT	Dnaja2	DnaJ homolog subfamily A member 2	1	DGNDLHMTYK	DGNDLHMTYK	3	DGNDLHMTYK3	54974.5	42835.2	46847.3
Q9QXY4	Q9QXY4	OGFR_RAT	Ogfr	Opioid growth factor receptor	1	DGNGPEDSNSQVGAEDSK	DGNGPEDSNSQVGAEDSK	2	DGNGPEDSNSQVGAEDSK2	3010.36	2050.47	5488.45
F1LYX9	F1LYX9	F1LYX9_RAT	Dsg2	Desmoglein 2	1	DGNGQITDKPVQQAQVQIR	DGNGQITDKPVQQAQVQIR	3	DGNGQITDKPVQQAQVQIR3	24924.5	13471.6	16172.9
P0DP29;P0DP30;P0DP31	P0DP30;P0DP29;P0DP31	CALM1_RAT;CALM2_RAT;CALM3_RAT	Calm1;Calm2;Calm3	Calmodulin-1	0	DGNGYISAAELR	DGNGYISAAELR	2	DGNGYISAAELR2	48565.9	44350.2	49588.6
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	DGNIGDAFNINPHSGSIVTQR	DGNIGDAFNINPHSGSIVTQR	3	DGNIGDAFNINPHSGSIVTQR3	80169	61616.9	112304
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	DGNINIDDLVK	DGNINIDDLVK	2	DGNINIDDLVK2	56943.1	59392.4	60367.3
Q6P7D4	Q6P7D4	CP20A_RAT	Cyp20a1	Cytochrome P450 20A1	1	DGNLPDIVNSGSLHEFLVNLHGR	DGNLPDIVNSGSLHEFLVNLHGR	3	DGNLPDIVNSGSLHEFLVNLHGR3	32765.8	25766	28502.4
Q6P7D4	Q6P7D4	CP20A_RAT	Cyp20a1	Cytochrome P450 20A1	1	DGNLPDIVNSGSLHEFLVNLHGR	DGNLPDIVNSGSLHEFLVNLHGR	4	DGNLPDIVNSGSLHEFLVNLHGR4	20337.3	7206.25	11382.3
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	DGNPVSPEGTPGLK	DGNPVSPEGTPGLK	2	DGNPVSPEGTPGLK2	24805.7	30783.9	20981.1
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	DGNTLTYYR	DGNTLTYYR	2	DGNTLTYYR2	58200.2	51277	36676.3
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	DGNVIFPAPTPK	DGNVIFPAPTPK	2	DGNVIFPAPTPK2	45250.3	42849.2	27396
Q6AYJ7	Q6AYJ7	Q6AYJ7_RAT	Cct6b	Chaperonin containing TCP1 subunit 6B	1	DGNVLLHEMQIQHPTASIIAK	DGNVLLHEMQIQHPTASIIAK	3	DGNVLLHEMQIQHPTASIIAK3	34083.2	44063.5	39857.2
F7ELS2	F7ELS2;A0A8I6GM53	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	0	DGNVLLHEMQIQHPTASLIAK	DGNVLLHEMQIQHPTASLIAK	3	DGNVLLHEMQIQHPTASLIAK3	34083.2	44063.5	39857.2
F7ELS2	F7ELS2;A0A8I6GM53	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	0	DGNVLLHEMQIQHPTASLIAK	DGNVLLHEMQIQHPTASLIAK	4	DGNVLLHEMQIQHPTASLIAK4	169046	178981	193004
A0A8I6AHQ9	A0A8I6AHQ9	A0A8I6AHQ9_RAT	Xpot	Exportin-T	1	DGPAGFADFVYK	DGPAGFADFVYK	2	DGPAGFADFVYK2	2186.5		1798.9
M0RA86	M0RA86	M0RA86_RAT	Ccdc9	Coiled-coil domain containing 9	1	DGPAPTHEPSHR	DGPAPTHEPSHR	2	DGPAPTHEPSHR2			2193.42
M0RA86	M0RA86	M0RA86_RAT	Ccdc9	Coiled-coil domain containing 9	1	DGPAPTHEPSHR	DGPAPTHEPSHR	3	DGPAPTHEPSHR3			8160.2
P27590	P27590	UROM_RAT	Umod	Uromodulin	1	DGPCGTVLR	DGPC(UniMod:4)GTVLR	2	DGPC(UniMod:4)GTVLR2	14627.1	16682.1	34146.4
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	DGPEPGLR	DGPEPGLR	2	DGPEPGLR2	64479.2	58915.7	65120.8
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	DGPGFYTTR	DGPGFYTTR	2	DGPGFYTTR2	340394	328726	381565
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	DGPGNPLR	DGPGNPLR	2	DGPGNPLR2	72710.7	72704.1	75058.4
P60570	P60570	PANX1_RAT	Panx1	Pannexin-1	1	DGPGPPGVTENVGQSLWEISESHFK	DGPGPPGVTENVGQSLWEISESHFK	3	DGPGPPGVTENVGQSLWEISESHFK3	74716.1	75154.3	53297.7
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	DGPLGETVLECYNCGCR	DGPLGETVLEC(UniMod:4)YNC(UniMod:4)GC(UniMod:4)R	3	DGPLGETVLEC(UniMod:4)YNC(UniMod:4)GC(UniMod:4)R3	4128.97		
Q6MGB4	Q6MGB4	S39A7_RAT	Slc39a7	Zinc transporter SLC39A7	1	DGPLKPQNPEEEK	DGPLKPQNPEEEK	2	DGPLKPQNPEEEK2	10995.4	9827.44	11840.8
Q6MGB4	Q6MGB4	S39A7_RAT	Slc39a7	Zinc transporter SLC39A7	1	DGPLKPQNPEEEK	DGPLKPQNPEEEK	3	DGPLKPQNPEEEK3	31164.6	23845.7	32274.4
P10760	P10760	SAHH_RAT	Ahcy	Adenosylhomocysteinase	1	DGPLNMILDDGGDLTNLIHTK	DGPLNMILDDGGDLTNLIHTK	3	DGPLNMILDDGGDLTNLIHTK3	7811.68	3679.29	4774.08
P06685	P06687;P06685;P06686	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	0	DGPNALTPPPTTPEWVK	DGPNALTPPPTTPEWVK	2	DGPNALTPPPTTPEWVK2	34399.3	46804.2	49332.9
Q66HF6	Q66HF6	Q66HF6_RAT	Tinag	Tubulointerstitial nephritis antigen	1	DGPPLQQPLDPEGCSR	DGPPLQQPLDPEGC(UniMod:4)SR	2	DGPPLQQPLDPEGC(UniMod:4)SR2	2957.26		
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	DGPQWTAGVTVLK	DGPQWTAGVTVLK	2	DGPQWTAGVTVLK2	7233.42	10159.2	9881.65
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	DGPSSAPATPTK	DGPSSAPATPTK	2	DGPSSAPATPTK2	8763.48	11412.2	11481
Q99P99	Q99P99	HDAC4_RAT	Hdac4	Histone deacetylase 4	1	DGPVATALK	DGPVATALK	2	DGPVATALK2	11469.3	12165.1	11042.7
P63245	P63245	RACK1_RAT	Rack1	Small ribosomal subunit protein RACK1	1	DGQAMLWDLNEGK	DGQAMLWDLNEGK	2	DGQAMLWDLNEGK2	34457.8	22600.6	23566.9
F1LT49	F1LT49	F1LT49_RAT	Lrrc47	Leucine rich repeat containing 47	1	DGQCPLVVEQVR	DGQC(UniMod:4)PLVVEQVR	2	DGQC(UniMod:4)PLVVEQVR2	19024.9	15381	19138.4
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	DGQERDAPIVNR	DGQERDAPIVNR	2	DGQERDAPIVNR2	76966.2	104988	83053.7
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	DGQERDAPIVNR	DGQERDAPIVNR	3	DGQERDAPIVNR3	822356	1.29813e+06	1.08929e+06
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	DGQEVTGNK	DGQEVTGNK	1	DGQEVTGNK1			2685.41
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	DGQEVTGNK	DGQEVTGNK	2	DGQEVTGNK2			34150.6
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	DGQGAFTCICK	DGQGAFTC(UniMod:4)IC(UniMod:4)K	2	DGQGAFTC(UniMod:4)IC(UniMod:4)K2	4346.67	701.402	3845.44
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	DGQGAFTCICKPGWQGDK	DGQGAFTC(UniMod:4)IC(UniMod:4)KPGWQGDK	3	DGQGAFTC(UniMod:4)IC(UniMod:4)KPGWQGDK3	41854.3	48441.3	40035.2
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	DGQGDACDDDIDGDR	DGQGDAC(UniMod:4)DDDIDGDR	2	DGQGDAC(UniMod:4)DDDIDGDR2	11286.4	9356.24	6054.58
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	DGQGDACDDDIDGDR	DGQGDAC(UniMod:4)DDDIDGDR	3	DGQGDAC(UniMod:4)DDDIDGDR3	10540.1	11006.5	14669.9
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	DGQGDACDDDIDGDRIR	DGQGDAC(UniMod:4)DDDIDGDRIR	3	DGQGDAC(UniMod:4)DDDIDGDRIR3	20864.6	19040.1	23481
F1LVV4	F1LVV4	F1LVV4_RAT	Rcc2	Regulator of chromosome condensation 2	1	DGQILPVPNVVVR	DGQILPVPNVVVR	2	DGQILPVPNVVVR2	10946.2	19623.2	23684.9
P08689	P08689	SHBG_RAT	Shbg	Sex hormone-binding globulin	1	DGQLEIQLHNLWAR	DGQLEIQLHNLWAR	3	DGQLEIQLHNLWAR3	2418.55	4148.81	2778.98
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	DGQLLPSSNYSNIK	DGQLLPSSNYSNIK	2	DGQLLPSSNYSNIK2	5726.86	5550.86	
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	DGQLQTVPVAADQQEVTIEGLQPGR	DGQLQTVPVAADQQEVTIEGLQPGR	3	DGQLQTVPVAADQQEVTIEGLQPGR3	6503.46		5638.1
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	DGQLQTVPVAADQQEVTIEGLQPGRK	DGQLQTVPVAADQQEVTIEGLQPGRK	3	DGQLQTVPVAADQQEVTIEGLQPGRK3	8373.08	14559.3	15456.7
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	DGQLWLCAPQAK	DGQLWLC(UniMod:4)APQAK	2	DGQLWLC(UniMod:4)APQAK2	121917	142720	122191
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	DGQPCMDHDR	DGQPC(UniMod:4)MDHDR	2	DGQPC(UniMod:4)MDHDR2	7624.25		12374.8
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	DGQPLLPGDSHILLQEDGQVLR	DGQPLLPGDSHILLQEDGQVLR	3	DGQPLLPGDSHILLQEDGQVLR3	14468.1	15320.8	
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	DGQPLPGDGDSQEQVLAVGR	DGQPLPGDGDSQEQVLAVGR	3	DGQPLPGDGDSQEQVLAVGR3	9508.42	4866.7	10621.1
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	DGQPLSLGQEVFLLPGTHTLR	DGQPLSLGQEVFLLPGTHTLR	3	DGQPLSLGQEVFLLPGTHTLR3	22564.7	15727.3	25759
D3ZE26	D3ZE26	D3ZE26_RAT	Tmcc2	Transmembrane and coiled-coil domain family 2	1	DGQSHLEDSMEDLK	DGQSHLEDSMEDLK	2	DGQSHLEDSMEDLK2	1916.25	1446.21	2357.45
D3ZE26	D3ZE26	D3ZE26_RAT	Tmcc2	Transmembrane and coiled-coil domain family 2	1	DGQSHLEDSMEDLK	DGQSHLEDSMEDLK	3	DGQSHLEDSMEDLK3	19690.5	19957.2	26385
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	DGQSQVVPVDGSHR	DGQSQVVPVDGSHR	2	DGQSQVVPVDGSHR2	4289.91	4722.5	2979.5
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	DGQSQVVPVDGSHR	DGQSQVVPVDGSHR	3	DGQSQVVPVDGSHR3	7227.29	12079.7	5752.82
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	DGQSVTSFSQR	DGQSVTSFSQR	2	DGQSVTSFSQR2	109505	116429	103399
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	DGQVIGIGAGQQSR	DGQVIGIGAGQQSR	2	DGQVIGIGAGQQSR2	38053.1	25328	17924.9
P31000	P31000	VIME_RAT	Vim	Vimentin	1	DGQVINETSQHHDDLE	DGQVINETSQHHDDLE	3	DGQVINETSQHHDDLE3	5129.04	3044.73	4058
P51607	P51607	RENBP_RAT	Renbp	N-acylglucosamine 2-epimerase	1	DGQVVLENVSEDGKELPGCLGR	DGQVVLENVSEDGKELPGC(UniMod:4)LGR	3	DGQVVLENVSEDGKELPGC(UniMod:4)LGR3	13734.5	11729.2	14322.1
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	DGRPLQPHVR	DGRPLQPHVR	3	DGRPLQPHVR3	7275.12	7329.4	3293.37
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	DGRPLWQK	DGRPLWQK	2	DGRPLWQK2		8246.08	3742.96
A0A8I6G604	A0A8I6G604	A0A8I6G604_RAT	Lman2l	Lectin, mannose-binding 2-like	1	DGRPTELGGCTAIVR	DGRPTELGGC(UniMod:4)TAIVR	3	DGRPTELGGC(UniMod:4)TAIVR3	8488.96	10746.4	11098.7
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	DGRPVTPSQR	DGRPVTPSQR	2	DGRPVTPSQR2			1920.17
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	DGSACVEGSGSSLR	DGSAC(UniMod:4)VEGSGSSLR	2	DGSAC(UniMod:4)VEGSGSSLR2	5616.87	5099.18	3928
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	DGSALISAMR	DGSALISAMR	2	DGSALISAMR2	112501	86252.2	125464
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	DGSAMVYNLASALR	DGSAMVYNLASALR	2	DGSAMVYNLASALR2	38555.9	7382.92	21352.4
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	DGSAMVYNLASALR	DGSAMVYNLASALR	3	DGSAMVYNLASALR3	5027.49	3678.42	
P62630	P62630;F1M6C2;M0R757	EF1A1_RAT	Eef1a1	Elongation factor 1-alpha 1	0	DGSASGTTLLEALDCILPPTRPTDK	DGSASGTTLLEALDC(UniMod:4)ILPPTRPTDK	3	DGSASGTTLLEALDC(UniMod:4)ILPPTRPTDK3	4897.46	4672.65	2690.89
P62630	P62630;F1M6C2;M0R757	EF1A1_RAT	Eef1a1	Elongation factor 1-alpha 1	0	DGSASGTTLLEALDCILPPTRPTDKPLR	DGSASGTTLLEALDC(UniMod:4)ILPPTRPTDKPLR	4	DGSASGTTLLEALDC(UniMod:4)ILPPTRPTDKPLR4	133984	124675	159200
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	DGSAVEIVGLCK	DGSAVEIVGLC(UniMod:4)K	2	DGSAVEIVGLC(UniMod:4)K2	5374.16		
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	DGSCGVAYVVQEPGDYEVSVK	DGSC(UniMod:4)GVAYVVQEPGDYEVSVK	3	DGSC(UniMod:4)GVAYVVQEPGDYEVSVK3	2.12011e+06	2.09434e+06	2.2623e+06
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	DGSCIGNSSR	DGSC(UniMod:4)IGNSSR	2	DGSC(UniMod:4)IGNSSR2	5913.78		
F1M7Q7	F1M7Q7	F1M7Q7_RAT	Otud4	ubiquitinyl hydrolase 1	1	DGSCLFR	DGSC(UniMod:4)LFR	2	DGSC(UniMod:4)LFR2	7251.06	7043.54	10673.2
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	DGSDEPGTAACPNGSFHCTNTGYK	DGSDEPGTAAC(UniMod:4)PNGSFHC(UniMod:4)TNTGYK	3	DGSDEPGTAAC(UniMod:4)PNGSFHC(UniMod:4)TNTGYK3	8709.1	12457	6436.24
D3ZUU5	D3ZUU5	D3ZUU5_RAT	Dnajb1	DnaJ heat shock protein family (Hsp40) member B1	1	DGSDVIYPAR	DGSDVIYPAR	2	DGSDVIYPAR2	8975.85		11490
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	DGSDYEGWCWPGSASYPDFTNPQMR	DGSDYEGWC(UniMod:4)WPGSASYPDFTNPQMR	3	DGSDYEGWC(UniMod:4)WPGSASYPDFTNPQMR3	46983.3	42326.4	42916.4
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	DGSEASLEWSSDR	DGSEASLEWSSDR	2	DGSEASLEWSSDR2	14270.6	21515.6	14171.2
D4A731	D4A731	D4A731_RAT	Ankib1	RBR-type E3 ubiquitin transferase	1	DGSEGVRDTELVPPEDSVSK	DGSEGVRDTELVPPEDSVSK	3	DGSEGVRDTELVPPEDSVSK3	10624.1	14585.9	6785.93
D4ACD2	D4ACD2	D4ACD2_RAT	Bach1	BTB domain and CNC homolog 1	1	DGSEQGYSQR	DGSEQGYSQR	2	DGSEQGYSQR2			2092
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	DGSFGAWLDR	DGSFGAWLDR	2	DGSFGAWLDR2	2.52461e+06	2.3931e+06	2.27721e+06
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	DGSFGAWLDRDSSTWLTAFVLK	DGSFGAWLDRDSSTWLTAFVLK	3	DGSFGAWLDRDSSTWLTAFVLK3			36120.4
P08649	P08649	CO4_RAT	C4	Complement C4	1	DGSFGAWLHR	DGSFGAWLHR	2	DGSFGAWLHR2	68435.8	60590.3	57735.8
P08649	P08649	CO4_RAT	C4	Complement C4	1	DGSFGAWLHR	DGSFGAWLHR	3	DGSFGAWLHR3	206574	230585	223748
P08649	P08649	CO4_RAT	C4	Complement C4	1	DGSFGAWLHRDSSTWLTAFVLK	DGSFGAWLHRDSSTWLTAFVLK	4	DGSFGAWLHRDSSTWLTAFVLK4			1482.88
B5DFA5	B5DFA5	B5DFA5_RAT	Poglut2	Protein O-glucosyltransferase 2	1	DGSFIVR	DGSFIVR	2	DGSFIVR2	77669.5		75060.2
P97573	Q9WVR3;P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	0	DGSFLVR	DGSFLVR	2	DGSFLVR2		92622.2	81604.2
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	DGSGFLINLIDSPGHVDFSSEVTAALR	DGSGFLINLIDSPGHVDFSSEVTAALR	3	DGSGFLINLIDSPGHVDFSSEVTAALR3	9948.2		
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	DGSGVGVFR	DGSGVGVFR	2	DGSGVGVFR2	107315	110443	88255.6
A0A8I6ACU2	A0A8I6ACU2	A0A8I6ACU2_RAT	Ubap2l	Ubiquitin associated protein 2-like	1	DGSLASNPYSGDLTK	DGSLASNPYSGDLTK	2	DGSLASNPYSGDLTK2	20326.8	19169	15887.2
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	DGSLEIGDTTTFSR	DGSLEIGDTTTFSR	2	DGSLEIGDTTTFSR2	8006.92	19697.7	8540.85
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	DGSLFWQSPK	DGSLFWQSPK	2	DGSLFWQSPK2	31057.8	43212.4	37974.4
Q62844	Q62844	FYN_RAT	Fyn	Tyrosine-protein kinase Fyn	1	DGSLNQSSGYR	DGSLNQSSGYR	2	DGSLNQSSGYR2	19734.3	21845.6	11326.4
A0A0G2K0G9	A0A0G2K0G9	A0A0G2K0G9_RAT	Rin3	Ras and Rab interactor 3	1	DGSLQQLK	DGSLQQLK	2	DGSLQQLK2	23164.4	24521.1	23242.4
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	DGSMNVSLK	DGSMNVSLK	2	DGSMNVSLK2	6681.72	6787.19	
D3ZM39	D3ZM39	D3ZM39_RAT	Dsg1	Desmoglein 1	1	DGSNVIVTER	DGSNVIVTER	2	DGSNVIVTER2	13415.9	18972.7	11446.4
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	DGSSFGEYGGWYK	DGSSFGEYGGWYK	2	DGSSFGEYGGWYK2	53476.3	57408.8	60095.5
P28073	P28073;A0A0G2JSL0	PSB6_RAT	Psmb6	Proteasome subunit beta type-6	0	DGSSGGVIR	DGSSGGVIR	2	DGSSGGVIR2	14260	13166.1	12824.7
P28077	P28077	PSB9_RAT	Psmb9	Proteasome subunit beta type-9	1	DGSSGGVIYLVTITADGVDHR	DGSSGGVIYLVTITADGVDHR	3	DGSSGGVIYLVTITADGVDHR3	185271	173077	197876
P28077	P28077	PSB9_RAT	Psmb9	Proteasome subunit beta type-9	1	DGSSGGVIYLVTITADGVDHRVILGDELPK	DGSSGGVIYLVTITADGVDHRVILGDELPK	4	DGSSGGVIYLVTITADGVDHRVILGDELPK4	35424.2	27626.7	21767.7
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	DGSSKPVGVEQLTDPTIEDASLAQTSPK	DGSSKPVGVEQLTDPTIEDASLAQTSPK	3	DGSSKPVGVEQLTDPTIEDASLAQTSPK3	10335.9	12355.2	12330.5
B2GV06	B2GV06	SCOT1_RAT	Oxct1	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial	1	DGSVAIASK	DGSVAIASK	2	DGSVAIASK2	30335.3	19259.1	20333.4
B2GV06	B2GV06	SCOT1_RAT	Oxct1	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial	1	DGSVAIASKPR	DGSVAIASKPR	2	DGSVAIASKPR2	97826.6	94681.7	72849.6
Q5U2R7	Q5U2R7	MESD_RAT	Mesd	LRP chaperone MESD	1	DGSYAWEIK	DGSYAWEIK	2	DGSYAWEIK2	6814.02	11063.1	3304.18
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	DGSYSAFGDHDGK	DGSYSAFGDHDGK	2	DGSYSAFGDHDGK2	104812	82418	72885.3
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	DGSYSAFGDHDGK	DGSYSAFGDHDGK	3	DGSYSAFGDHDGK3	277584	297571	353694
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	DGSYSAFGDHDGKGQGNTWLTAFVLK	DGSYSAFGDHDGKGQGNTWLTAFVLK	4	DGSYSAFGDHDGKGQGNTWLTAFVLK4	17787.3	14769.5	21937.5
P14046	Q6IE52;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	DGSYSAFGDHNGQGQGNTWLTAFVLK	DGSYSAFGDHNGQGQGNTWLTAFVLK	3	DGSYSAFGDHNGQGQGNTWLTAFVLK3	1.24004e+07	1.17506e+07	1.06442e+07
P14046	Q6IE52;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	DGSYSAFGDHNGQGQGNTWLTAFVLK	DGSYSAFGDHNGQGQGNTWLTAFVLK	4	DGSYSAFGDHNGQGQGNTWLTAFVLK4	1.02162e+06	961735	808533
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	DGSYSTFGDKPGR	DGSYSTFGDKPGR	3	DGSYSTFGDKPGR3	18680.3	6587.43	11302.9
Q5XFW6	Q5XFW6	WDR6_RAT	Wdr6	WD repeat-containing protein 6	1	DGSYYQLFVHGGR	DGSYYQLFVHGGR	3	DGSYYQLFVHGGR3	2398.3	7668.02	8059.66
Q6EV70	Q6EV70	OFUT1_RAT	Pofut1	GDP-fucose protein O-fucosyltransferase 1	1	DGTAGSHFMASPQCVGYSR	DGTAGSHFMASPQC(UniMod:4)VGYSR	3	DGTAGSHFMASPQC(UniMod:4)VGYSR3	1671.39	3496.72	
D3ZUV3	D3ZUV3	D3ZUV3_RAT	Eif2a	Eukaryotic translation initiation factor 2A	1	DGTAGTPNLQLYDVK	DGTAGTPNLQLYDVK	2	DGTAGTPNLQLYDVK2	5740.65	3925.5	
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	DGTCIVWDLNR	DGTC(UniMod:4)IVWDLNR	2	DGTC(UniMod:4)IVWDLNR2	6078.37	6125.28	3747.49
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	DGTCPPVHQGCEDNPCPAGSECVADPREEK	DGTC(UniMod:4)PPVHQGC(UniMod:4)EDNPC(UniMod:4)PAGSEC(UniMod:4)VADPREEK	4	DGTC(UniMod:4)PPVHQGC(UniMod:4)EDNPC(UniMod:4)PAGSEC(UniMod:4)VADPREEK4	19327.8	21429.4	20882.4
O08984	O08984	LBR_RAT	Lbr	Delta(14)-sterol reductase LBR	1	DGTELELK	DGTELELK	2	DGTELELK2	5347.65	5088.97	7418.66
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	DGTFLNLVSDDRR	DGTFLNLVSDDRR	3	DGTFLNLVSDDRR3	89287	72896	
Q5XIA1	Q5XIA1	NCLN_RAT	Ncln	BOS complex subunit NCLN	1	DGTFLSTLEHFLSR	DGTFLSTLEHFLSR	3	DGTFLSTLEHFLSR3	1659.83	7909.05	7895.38
P24135	P24135;A0A096MKD7;Q63787	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	0	DGTFLVR	DGTFLVR	2	DGTFLVR2	85226.7	73534.9	67764.5
D3ZV40	D3ZV40	D3ZV40_RAT	Unk	Unk zinc finger	1	DGTFNYSPDVYCTK	DGTFNYSPDVYC(UniMod:4)TK	2	DGTFNYSPDVYC(UniMod:4)TK2	5859.44	3680.99	802.261
Q6AYQ9	Q6AYQ9	Q6AYQ9_RAT	Ppic	Peptidyl-prolyl cis-trans isomerase	1	DGTGGMSIYGETFPDENFK	DGTGGMSIYGETFPDENFK	3	DGTGGMSIYGETFPDENFK3	10202.3	12619.1	10736
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	DGTGNQMLQVMENGR	DGTGNQMLQVMENGR	2	DGTGNQMLQVMENGR2	10853.2	6156.47	10740.2
O08654	O08654	PHAF1_RAT	Phaf1	Phagosome assembly factor 1	1	DGTGPSGLR	DGTGPSGLR	2	DGTGPSGLR2	5404.9	5269.37	8250.77
D4A9L2	D4A9L2	D4A9L2_RAT	Srsf1	Serine/arginine-rich splicing factor 1	1	DGTGVVEFVR	DGTGVVEFVR	2	DGTGVVEFVR2	13806.5	14210.4	11968.6
Q6MG48	Q6MG48;A0A8I6AGW8;A0A8I6G6W8	PRC2A_RAT	Prrc2a	Protein PRRC2A	0	DGTGWASK	DGTGWASK	2	DGTGWASK2	23951.8	23441.7	31984.8
Q925N6	Q925N6	IGSF1_RAT	Igsf1	Immunoglobulin superfamily member 1	1	DGTGWIATRPASEQVR	DGTGWIATRPASEQVR	3	DGTGWIATRPASEQVR3	22828.8	27963.7	40454.4
B1WC97	B1WC97	KCTD7_RAT	Kctd7	BTB/POZ domain-containing protein KCTD7	1	DGTHFGDVLNFLR	DGTHFGDVLNFLR	3	DGTHFGDVLNFLR3	13024.6	7848.55	9400.78
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	DGTHVVENVDATHIGK	DGTHVVENVDATHIGK	2	DGTHVVENVDATHIGK2	5355.45	3958.02	4319.86
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	DGTHVVENVDATHIGK	DGTHVVENVDATHIGK	3	DGTHVVENVDATHIGK3	286133	248434	249842
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	DGTHVVENVDATHIGK	DGTHVVENVDATHIGK	4	DGTHVVENVDATHIGK4	143025	139673	163685
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	DGTIIHLK	DGTIIHLK	2	DGTIIHLK2	16622.3	17620.4	20040.7
Q9R010	Q9R010	CIB1_RAT	Cib1	Calcium and integrin-binding protein 1	1	DGTINLSEFQHVISR	DGTINLSEFQHVISR	3	DGTINLSEFQHVISR3	6567.07	6622.87	11921.3
Q6IRE4	Q6IRE4	TS101_RAT	Tsg101	Tumor susceptibility gene 101 protein	1	DGTISEDTIR	DGTISEDTIR	2	DGTISEDTIR2	103150	97795.8	89782.7
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	DGTLLAPSSEVIYSK	DGTLLAPSSEVIYSK	2	DGTLLAPSSEVIYSK2	32244.1	31975	35934.9
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	DGTLRPCWPAR	DGTLRPC(UniMod:4)WPAR	3	DGTLRPC(UniMod:4)WPAR3	50411.8	73158	58821.3
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	DGTLVSGGGK	DGTLVSGGGK	2	DGTLVSGGGK2	142351	158765	195215
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	DGTLVSGGGKDR	DGTLVSGGGKDR	2	DGTLVSGGGKDR2	4818.55	10067.2	5249.56
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	DGTLVSGGGR	DGTLVSGGGR	2	DGTLVSGGGR2	109776	87410.6	114782
Q64380	Q64380	SARDH_RAT	Sardh	Sarcosine dehydrogenase, mitochondrial	1	DGTMDPAGTCTTLTR	DGTMDPAGTC(UniMod:4)TTLTR	2	DGTMDPAGTC(UniMod:4)TTLTR2	3911.57	3381.14	6408.88
A0A8I6AA52	A0A8I6AA52	A0A8I6AA52_RAT	Wdr48	WD repeat-containing protein 48	1	DGTQCLSGSSDGTIR	DGTQC(UniMod:4)LSGSSDGTIR	2	DGTQC(UniMod:4)LSGSSDGTIR2	17332.9	7383.35	
G3V686	G3V686	RETNG_RAT	Retnlg	Resistin-like gamma	1	DGTTCHCQCAVMDWATAR	DGTTC(UniMod:4)HC(UniMod:4)QC(UniMod:4)AVMDWATAR	3	DGTTC(UniMod:4)HC(UniMod:4)QC(UniMod:4)AVMDWATAR3	5669.61	5068.99	4691.64
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	DGTTDVTR	DGTTDVTR	2	DGTTDVTR2	34159.3		38307.9
Q9WVS2	Q9WVS2	OSGEP_RAT	Osgep	tRNA N6-adenosine threonylcarbamoyltransferase	1	DGTVLANPR	DGTVLANPR	2	DGTVLANPR2	13412.4	15909.2	
Q5XFX0	Q5XFX0	TAGL2_RAT	Tagln2	Transgelin-2	1	DGTVLCELINSLYPEGQAPVK	DGTVLC(UniMod:4)ELINSLYPEGQAPVK	3	DGTVLC(UniMod:4)ELINSLYPEGQAPVK3	27833.9	20815.4	25366.2
Q5XFX0	Q5XFX0	TAGL2_RAT	Tagln2	Transgelin-2	1	DGTVLCELINSLYPEGQAPVKK	DGTVLC(UniMod:4)ELINSLYPEGQAPVKK	3	DGTVLC(UniMod:4)ELINSLYPEGQAPVKK3	539585	509668	518755
Q5XFX0	Q5XFX0	TAGL2_RAT	Tagln2	Transgelin-2	1	DGTVLCELINSLYPEGQAPVKK	DGTVLC(UniMod:4)ELINSLYPEGQAPVKK	4	DGTVLC(UniMod:4)ELINSLYPEGQAPVKK4	11364.9	12068.9	11651.1
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	DGTVLSGGGR	DGTVLSGGGR	2	DGTVLSGGGR2	30126.6	29760.6	32663.2
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	DGTYAVTYIPDK	DGTYAVTYIPDK	2	DGTYAVTYIPDK2	9750.31	6858.53	9645.39
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	DGTYYVYGIVSWGQECGK	DGTYYVYGIVSWGQEC(UniMod:4)GK	3	DGTYYVYGIVSWGQEC(UniMod:4)GK3	61189	82324.1	92927.7
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	DGTYYVYGIVSWGQECGKK	DGTYYVYGIVSWGQEC(UniMod:4)GKK	3	DGTYYVYGIVSWGQEC(UniMod:4)GKK3	94154.9	92119	91886.4
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	DGTYYVYGIVSWGQECGKKPGVYTQVTK	DGTYYVYGIVSWGQEC(UniMod:4)GKKPGVYTQVTK	4	DGTYYVYGIVSWGQEC(UniMod:4)GKKPGVYTQVTK4	12312.7	17241.7	
P07632	P07632	SODC_RAT	Sod1	Superoxide dismutase [Cu-Zn]	1	DGVANVSIEDR	DGVANVSIEDR	2	DGVANVSIEDR2	10802.9	5425.3	9573.12
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	DGVDAFTR	DGVDAFTR	2	DGVDAFTR2	467697	392762	441277
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	DGVDIAGFK	DGVDIAGFK	2	DGVDIAGFK2	53918.6	69358.2	58722.7
C0HJX2;C0HJX3	A0A0G2KBC9;C0HJX3;C0HJX2	LRB3A_RAT;LRB3B_RAT	Lilrb3a;Lilrb3b	Leukocyte immunoglobulin-like receptor subfamily B member 3A	0	DGVELDTWK	DGVELDTWK	2	DGVELDTWK2	9484.88	3795.05	
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	DGVGDACQGDFDADK	DGVGDAC(UniMod:4)QGDFDADK	2	DGVGDAC(UniMod:4)QGDFDADK2	3515.04	6090.33	4678.33
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	DGVGVGISCMAQDCPLR	DGVGVGISC(UniMod:4)MAQDC(UniMod:4)PLR	2	DGVGVGISC(UniMod:4)MAQDC(UniMod:4)PLR2	6231.34	6412.39	6837.31
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	DGVIEASINHEK	DGVIEASINHEK	2	DGVIEASINHEK2	26741.5	26138.1	31794.4
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	DGVIEASINHEK	DGVIEASINHEK	3	DGVIEASINHEK3	41650.6	57432.3	68471.2
D3ZRX9	D3ZRX9	D3ZRX9_RAT	Cnn2	Calponin	1	DGVILCTLMNK	DGVILC(UniMod:4)TLMNK	2	DGVILC(UniMod:4)TLMNK2	818915	681608	944777
Q4KM35	Q4KM35	PSB10_RAT	Psmb10	Proteasome subunit beta type-10	1	DGVILGADTR	DGVILGADTR	2	DGVILGADTR2	1.07973e+06	1.09087e+06	1.19333e+06
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	DGVIQTK	DGVIQTK	2	DGVIQTK2	30422.5	38311.1	39921.9
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	DGVISVSK	DGVISVSK	2	DGVISVSK2	68012.2	68485.8	65836.4
P17164	P17164	FUCO_RAT	Fuca1	Tissue alpha-L-fucosidase	1	DGVIVPIFQER	DGVIVPIFQER	2	DGVIVPIFQER2	41529.1	38420.6	17508.2
P01836	P01835;F1LTN6;P01836	KACA_RAT		Ig kappa chain C region, A allele	0	DGVLDSVTDQDSK	DGVLDSVTDQDSK	2	DGVLDSVTDQDSK2	195898	160991	161200
P01836	P01835;F1LTN6;P01836	KACA_RAT		Ig kappa chain C region, A allele	0	DGVLDSVTDQDSK	DGVLDSVTDQDSK	3	DGVLDSVTDQDSK3	96862.8	98413.2	135115
P01836	P01835;F1LTN6;P01836	KACA_RAT		Ig kappa chain C region, A allele	0	DGVLDSVTDQDSKDSTYSMSSTLSLTK	DGVLDSVTDQDSKDSTYSMSSTLSLTK	3	DGVLDSVTDQDSKDSTYSMSSTLSLTK3	455633	489639	444265
P01836	P01835;F1LTN6;P01836	KACA_RAT		Ig kappa chain C region, A allele	0	DGVLDSVTDQDSKDSTYSMSSTLSLTK	DGVLDSVTDQDSKDSTYSMSSTLSLTK	4	DGVLDSVTDQDSKDSTYSMSSTLSLTK4	10948	10782.2	13946.2
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	DGVLLCQLLNNLRPHSINLK	DGVLLC(UniMod:4)QLLNNLRPHSINLK	3	DGVLLC(UniMod:4)QLLNNLRPHSINLK3	7052.35	28542.9	25509.8
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	DGVLLCQLLNNLRPHSINLK	DGVLLC(UniMod:4)QLLNNLRPHSINLK	4	DGVLLC(UniMod:4)QLLNNLRPHSINLK4	68362.6	113807	85761.5
Q4QQV8	Q4QQV8	CHMP5_RAT	Chmp5	Charged multivesicular body protein 5	1	DGVLVDEFGLPQIPAS	DGVLVDEFGLPQIPAS	2	DGVLVDEFGLPQIPAS2	58344.9	66703.7	77667.6
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	DGVLYVK	DGVLYVK	2	DGVLYVK2	13067	12259.6	16457
P80386	P80386	AAKB1_RAT	Prkab1	5'-AMP-activated protein kinase subunit beta-1	1	DGVMVLSATHR	DGVMVLSATHR	2	DGVMVLSATHR2	15773.1	11475.2	10252.6
P80386	P80386	AAKB1_RAT	Prkab1	5'-AMP-activated protein kinase subunit beta-1	1	DGVMVLSATHR	DGVMVLSATHR	3	DGVMVLSATHR3	27099.7	25112.9	25504.9
A0A8I6GK59	A0A8I6GK59	A0A8I6GK59_RAT	Bmp2k	BMP-2 inducible kinase	1	DGVNVVEEEIK	DGVNVVEEEIK	2	DGVNVVEEEIK2	7468.81	2337.66	
A0A8I6GK59	A0A8I6GK59	A0A8I6GK59_RAT	Bmp2k	BMP-2 inducible kinase	1	DGVNVVEEEIKK	DGVNVVEEEIKK	3	DGVNVVEEEIKK3	11454.6	12068.5	6299.46
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	DGVPDAQDAENTQAAQPEESR	DGVPDAQDAENTQAAQPEESR	3	DGVPDAQDAENTQAAQPEESR3	19073.3	20760	19764.1
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	DGVPDAQDAENTQAAQPEESRSEGR	DGVPDAQDAENTQAAQPEESRSEGR	3	DGVPDAQDAENTQAAQPEESRSEGR3	5794.6	6098.11	
Q62764	Q62764	YBOX3_RAT	Ybx3	Y-box-binding protein 3	1	DGVPEGAQLQVHR	DGVPEGAQLQVHR	3	DGVPEGAQLQVHR3	10244.8		
F1M1L9	F1M1L9	F1M1L9_RAT	Cpne2	Copine 2	1	DGVPLEMECINPK	DGVPLEMEC(UniMod:4)INPK	2	DGVPLEMEC(UniMod:4)INPK2	8045.06	5491.43	11050
Q9JHY1	Q9JHY1	JAM1_RAT	F11r	Junctional adhesion molecule A	1	DGVPMLTADAK	DGVPMLTADAK	2	DGVPMLTADAK2	833394	797862	951042
Q9JHY1	Q9JHY1	JAM1_RAT	F11r	Junctional adhesion molecule A	1	DGVPMLTADAKK	DGVPMLTADAKK	3	DGVPMLTADAKK3	34815	50418.5	52012.4
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	DGVQVTESGK	DGVQVTESGK	2	DGVQVTESGK2	94190.8	63968.8	70365.2
P61589	P61589	RHOA_RAT	Rhoa	Transforming protein RhoA	1	DGVREVFEMATR	DGVREVFEMATR	3	DGVREVFEMATR3	5545.8	4847.21	7664.02
B1WBN7	B1WBN7	B1WBN7_RAT	Fam20c	FAM20C	1	DGVSSVVEDDLATEHR	DGVSSVVEDDLATEHR	2	DGVSSVVEDDLATEHR2	5825.24	5149.58	
B1WBN7	B1WBN7	B1WBN7_RAT	Fam20c	FAM20C	1	DGVSSVVEDDLATEHR	DGVSSVVEDDLATEHR	3	DGVSSVVEDDLATEHR3	60589.8	46304.1	61887.9
A0A8I5YCC9	A0A8I5YCC9	A0A8I5YCC9_RAT	Itga5	Integrin subunit alpha 5	1	DGVSVLVGAPK	DGVSVLVGAPK	2	DGVSVLVGAPK2	12689.1	15805.1	20345.6
P63039	A0A8I5ZVK6;A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	DGVTVAK	DGVTVAK	1	DGVTVAK1	6230.99	2433.42	9046.5
P18422	P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	1	DGVVFGVEK	DGVVFGVEK	1	DGVVFGVEK1	60820.8	58193	57036.2
P18422	P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	1	DGVVFGVEK	DGVVFGVEK	2	DGVVFGVEK2	4.49382e+06	4.39542e+06	5.2116e+06
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	DGVVKPLK	DGVVKPLK	2	DGVVKPLK2	22953.1	13772	21698.2
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	DGVVLFK	DGVVLFK	1	DGVVLFK1	14350.3	8096.66	9105.59
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	DGVVLFK	DGVVLFK	2	DGVVLFK2	740404	665843	719005
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	DGVVLFKK	DGVVLFKK	2	DGVVLFKK2	3660.44	4087.03	9238.69
Q6MG06	Q6MG06	GNL1_RAT	Gnl1	Guanine nucleotide-binding protein-like 1	1	DGVVTIGCVGFPNVGK	DGVVTIGC(UniMod:4)VGFPNVGK	2	DGVVTIGC(UniMod:4)VGFPNVGK2	12518.5	15521.5	13607.2
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	DGVVVTINK	DGVVVTINK	1	DGVVVTINK1	2656.36		2401.88
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	DGVVVTINK	DGVVVTINK	2	DGVVVTINK2	388248	398021	307813
Q8CGZ2	Q8CGZ2	ADIP_RAT	Ssx2ip	Afadin- and alpha-actinin-binding protein	1	DGVWSLSCDTVR	DGVWSLSC(UniMod:4)DTVR	2	DGVWSLSC(UniMod:4)DTVR2	4936.21	3569.48	4370.7
D4AEP0	D4AEP0	D4AEP0_RAT	Adss	Adenylosuccinate synthetase isozyme 2	1	DGVYFLYEALHGPPK	DGVYFLYEALHGPPK	3	DGVYFLYEALHGPPK3	4949.32	6404.04	9800.02
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	DGVYILDLAAK	DGVYILDLAAK	2	DGVYILDLAAK2	39984.5	39811.4	34183
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	DGWHSWPIAHHWPQGPSAVDAAFSWDEK	DGWHSWPIAHHWPQGPSAVDAAFSWDEK	4	DGWHSWPIAHHWPQGPSAVDAAFSWDEK4	69647	98965.2	74661
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	DGWLHTGDIGR	DGWLHTGDIGR	3	DGWLHTGDIGR3	14956.3	8656.45	15018.9
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	DGWPMMLR	DGWPMMLR	2	DGWPMMLR2	89109.9	91681.8	88129.3
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	DGYAQILR	DGYAQILR	2	DGYAQILR2	69396.3	43638	88445.7
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	DGYILIGSSQIR	DGYILIGSSQIR	2	DGYILIGSSQIR2	45106.8	30730.7	26837
P63100	A0A0H2UHV6;P63100	CANB1_RAT	Ppp3r1	Calcineurin subunit B type 1	0	DGYISNGELFQVLK	DGYISNGELFQVLK	2	DGYISNGELFQVLK2	13376.1	9480.27	4859.27
Q9QX79	Q9QX79	FETUB_RAT	Fetub	Fetuin-B	1	DGYMLTLNR	DGYMLTLNR	2	DGYMLTLNR2	1.27402e+06	1.45199e+06	1.6453e+06
B5DEY9	B5DEY9	B5DEY9_RAT	Csgalnact1	Hexosyltransferase	1	DGYQAVLQER	DGYQAVLQER	2	DGYQAVLQER2	4348.55	7236.59	3868.96
Q5M9G3	Q5M9G3	CAPR1_RAT	Caprin1	Caprin-1	1	DGYQQNFK	DGYQQNFK	2	DGYQQNFK2	14311.2	19993.2	21169.2
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	DGYSQQIVCHCR	DGYSQQIVC(UniMod:4)HC(UniMod:4)R	3	DGYSQQIVC(UniMod:4)HC(UniMod:4)R3		3627.05	
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	DGYVPPK	DGYVPPK	1	DGYVPPK1	12271.5	14316.3	15826
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	DGYVPPK	DGYVPPK	2	DGYVPPK2	96181	81988.7	80071.5
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	DGYWFLK	DGYWFLK	2	DGYWFLK2	87518.7	70993.3	80282.1
O35509	O35509;P62494	RB11B_RAT	Rab11b	Ras-related protein Rab-11B	0	DHADSNIVIMLVGNK	DHADSNIVIMLVGNK	2	DHADSNIVIMLVGNK2	66682.8	74478.5	57242.2
O35509	O35509;P62494	RB11B_RAT	Rab11b	Ras-related protein Rab-11B	0	DHADSNIVIMLVGNK	DHADSNIVIMLVGNK	3	DHADSNIVIMLVGNK3	413304	403926	391232
D3Z9C0	D3Z9C0	D3Z9C0_RAT	Mios	Meiosis regulator for oocyte development	1	DHAECPVSACTCK	DHAEC(UniMod:4)PVSAC(UniMod:4)TC(UniMod:4)K	3	DHAEC(UniMod:4)PVSAC(UniMod:4)TC(UniMod:4)K3	8289.33	6890.46	5195.17
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	DHAELMEFK	DHAELMEFK	2	DHAELMEFK2	43780.3	28075.3	44429.1
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	DHAELMEFKK	DHAELMEFKK	2	DHAELMEFKK2	3989.13		3728.33
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	DHAELMEFKK	DHAELMEFKK	3	DHAELMEFKK3	133167	137907	140531
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	DHAFVTSSFPVILSIEEHCSVEQQR	DHAFVTSSFPVILSIEEHC(UniMod:4)SVEQQR	4	DHAFVTSSFPVILSIEEHC(UniMod:4)SVEQQR4	21725.1	25114.2	25447.2
A0A0G2K1D2	A0A0G2K1D2	A0A0G2K1D2_RAT	Rap1gds1	Rap1 GTPase-GDP dissociation stimulator 1	1	DHAGVMGESNR	DHAGVMGESNR	2	DHAGVMGESNR2	2205.8	4790.78	
Q6VBQ5	Q6VBQ5	MYADM_RAT	Myadm	Myeloid-associated differentiation marker	1	DHAIAATTFSCVACLAYATEVAWTR	DHAIAATTFSC(UniMod:4)VAC(UniMod:4)LAYATEVAWTR	3	DHAIAATTFSC(UniMod:4)VAC(UniMod:4)LAYATEVAWTR3	5258.58	5088.99	6489.85
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	DHALLEEQSK	DHALLEEQSK	2	DHALLEEQSK2	26210.3	16638.5	21750.2
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	DHALLEEQSK	DHALLEEQSK	3	DHALLEEQSK3	56221.9	52911.8	59177.7
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	DHAMEDPDK	DHAMEDPDK	2	DHAMEDPDK2	49856.9		31983
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	DHAMEDPDKK	DHAMEDPDKK	2	DHAMEDPDKK2			34054.6
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	DHAMEDPDKK	DHAMEDPDKK	3	DHAMEDPDKK3			87458.1
P05765	P05765;A0A8I6A7I3;D3ZRI8	RS21_RAT	Rps21	Small ribosomal subunit protein eS21	0	DHASIQMNVAEVDR	DHASIQMNVAEVDR	2	DHASIQMNVAEVDR2	3919.71	7396.25	2891.54
P05765	P05765;A0A8I6A7I3;D3ZRI8	RS21_RAT	Rps21	Small ribosomal subunit protein eS21	0	DHASIQMNVAEVDR	DHASIQMNVAEVDR	3	DHASIQMNVAEVDR3	44320.7	40290.8	37519.2
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	DHATEELSDLK	DHATEELSDLK	3	DHATEELSDLK3	6214.04	1954.93	5602.15
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	DHATEELSDLKK	DHATEELSDLKK	3	DHATEELSDLKK3	11188.2	11846.5	8267.18
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	DHATLNDIFMNNVIVR	DHATLNDIFMNNVIVR	3	DHATLNDIFMNNVIVR3	59569.5	39377.2	44440
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	DHAVDLIQK	DHAVDLIQK	2	DHAVDLIQK2	69973.2	72231	51934.8
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	DHAVDLIQKGHMR	DHAVDLIQKGHMR	3	DHAVDLIQKGHMR3	4568.62	6549.01	8734.32
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	DHAVDLIQKGHMR	DHAVDLIQKGHMR	4	DHAVDLIQKGHMR4	35099.7	34391.2	31980.3
P63036	P63036	DNJA1_RAT	Dnaja1	DnaJ homolog subfamily A member 1	1	DHAVFTR	DHAVFTR	2	DHAVFTR2	85031.7	69440.6	79243.8
G3V784	G3V784	G3V784_RAT	Adpgk	ADP-dependent glucokinase	1	DHAVLHSR	DHAVLHSR	2	DHAVLHSR2			2457.43
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	DHCALVR	DHC(UniMod:4)ALVR	2	DHC(UniMod:4)ALVR2	13466.6	15931.6	13707.8
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	DHCSCDGYTNSIYTISISSTAESGK	DHC(UniMod:4)SC(UniMod:4)DGYTNSIYTISISSTAESGK	3	DHC(UniMod:4)SC(UniMod:4)DGYTNSIYTISISSTAESGK3	9095.21	8142.75	11029.6
Q6TA25	Q6TA25	FGOP2_RAT	Fgfr1op2	FGFR1 oncogene partner 2 homolog	1	DHDDAAESLIEQTTALSK	DHDDAAESLIEQTTALSK	3	DHDDAAESLIEQTTALSK3	3413.08		3883.22
Q5PQZ9	Q5PQZ9	Q5PQZ9_RAT	Ndufc2	NADH dehydrogenase [ubiquinone] 1 subunit C2	1	DHDMFGYIK	DHDMFGYIK	2	DHDMFGYIK2	17978.8	27181.2	13700.3
F7FPK8	F7FPK8	F7FPK8_RAT	Lman2	Lectin, mannose-binding 2	1	DHDTFLAVR	DHDTFLAVR	2	DHDTFLAVR2	76730.5	66201.1	75997.2
D3ZTC4	D3ZTC4	D3ZTC4_RAT	Ccdc88b	Coiled-coil domain containing 88B	1	DHEALVQLQR	DHEALVQLQR	3	DHEALVQLQR3	4850.73	2609.19	
Q9EQV9	Q9EQV9	CBPB2_RAT	Cpb2	Carboxypeptidase B2	1	DHEELSLVASEAVR	DHEELSLVASEAVR	2	DHEELSLVASEAVR2		2270.73	2183.63
Q9EQV9	Q9EQV9	CBPB2_RAT	Cpb2	Carboxypeptidase B2	1	DHEELSLVASEAVR	DHEELSLVASEAVR	3	DHEELSLVASEAVR3	22845.5	27477.5	16191
Q6V0K7	Q6V0K7	OIT3_RAT	Oit3	Oncoprotein-induced transcript 3 protein	1	DHEFEEPYR	DHEFEEPYR	3	DHEFEEPYR3	16831.5	15474.2	19979.5
Q6V0K7	Q6V0K7	OIT3_RAT	Oit3	Oncoprotein-induced transcript 3 protein	1	DHEFEEPYRETLPTLK	DHEFEEPYRETLPTLK	3	DHEFEEPYRETLPTLK3	15240.7	14140.9	9467.2
Q6V0K7	Q6V0K7	OIT3_RAT	Oit3	Oncoprotein-induced transcript 3 protein	1	DHEFEEPYRETLPTLK	DHEFEEPYRETLPTLK	4	DHEFEEPYRETLPTLK4	32918	40483.5	30136.2
Q9JLU4	Q9JLU4	SHAN3_RAT	Shank3	SH3 and multiple ankyrin repeat domains protein 3	1	DHEGFGFVLR	DHEGFGFVLR	3	DHEGFGFVLR3	2634.26	2049.41	2007.09
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	DHEISYAK	DHEISYAK	2	DHEISYAK2	26343.1	22433.5	18303.7
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	DHENIVIAK	DHENIVIAK	2	DHENIVIAK2	618044	595649	589410
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	DHENRLEALQQAQEIDKLK	DHENRLEALQQAQEIDKLK	4	DHENRLEALQQAQEIDKLK4	7126.94	16319.2	14591.4
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	DHEQLYIMSER	DHEQLYIMSER	2	DHEQLYIMSER2	11985.4	9946.06	6604.9
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	DHEQLYIMSER	DHEQLYIMSER	3	DHEQLYIMSER3	29313	27239.1	31837.6
A0A8I6A9T1	A0A8I6A9T1	A0A8I6A9T1_RAT	Traf7	TNF receptor associated factor 7	1	DHESSCDYRPVR	DHESSC(UniMod:4)DYRPVR	3	DHESSC(UniMod:4)DYRPVR3	7376.25	7296.74	8673.35
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	DHETELLSQQK	DHETELLSQQK	2	DHETELLSQQK2	8543.85	10080.2	11854.8
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	DHETELLSQQK	DHETELLSQQK	3	DHETELLSQQK3	99748.4	112975	101409
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	DHEVLFPK	DHEVLFPK	2	DHEVLFPK2	16559.4	14245.9	7887.55
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	DHFEEAMR	DHFEEAMR	2	DHFEEAMR2	525032	473566	535454
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	DHFGLEGDEESTMLEDSVSPK	DHFGLEGDEESTMLEDSVSPK	3	DHFGLEGDEESTMLEDSVSPK3	835603	791490	786910
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	DHFGLEGDEESTMLEDSVSPKK	DHFGLEGDEESTMLEDSVSPKK	3	DHFGLEGDEESTMLEDSVSPKK3	21165.2	17138.5	16927.9
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	DHFGLEGDEESTMLEDSVSPKK	DHFGLEGDEESTMLEDSVSPKK	4	DHFGLEGDEESTMLEDSVSPKK4	25003.8	38938.3	34516.1
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	DHFIDGFISLGAPWGGSIK	DHFIDGFISLGAPWGGSIK	3	DHFIDGFISLGAPWGGSIK3	19948.9	11581.6	16176.8
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	DHFIDGFISLGAPWGGSIKPMR	DHFIDGFISLGAPWGGSIKPMR	3	DHFIDGFISLGAPWGGSIKPMR3	318039		302236
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	DHFIDGFISLGAPWGGSIKPMR	DHFIDGFISLGAPWGGSIKPMR	4	DHFIDGFISLGAPWGGSIKPMR4	77993	69141.4	84610
D4ADT7	D4ADT7	D4ADT7_RAT	Nod1	Nucleotide-binding oligomerization domain containing 1	1	DHFQFTNLFLCGLLAK	DHFQFTNLFLC(UniMod:4)GLLAK	3	DHFQFTNLFLC(UniMod:4)GLLAK3	2830.77	1049.66	2704.46
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	DHFQLGTLSHTLNVK	DHFQLGTLSHTLNVK	3	DHFQLGTLSHTLNVK3	23149.5	26660	27684.8
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	DHFQLGTLSHTLNVK	DHFQLGTLSHTLNVK	4	DHFQLGTLSHTLNVK4	3127.51	3260.19	4162.15
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	DHFSLQAQYR	DHFSLQAQYR	2	DHFSLQAQYR2	452633	494146	545123
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	DHFSLQAQYR	DHFSLQAQYR	3	DHFSLQAQYR3	241417	300610	274085
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	DHGASWFK	DHGASWFK	2	DHGASWFK2	7241.15	7372.56	5231.56
Q9JHK1	Q9JHK1	Q9JHK1_RAT	Casp9	Caspase-9	1	DHGFEVAFTSSQDK	DHGFEVAFTSSQDK	3	DHGFEVAFTSSQDK3	1574.41		
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	DHGGALGPEEFK	DHGGALGPEEFK	2	DHGGALGPEEFK2	25255.4	17764.9	22831.3
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	DHGGALGPEEFK	DHGGALGPEEFK	3	DHGGALGPEEFK3	92680.1	71902.5	87836.6
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	DHGHFELLQNEDVFTLVLK	DHGHFELLQNEDVFTLVLK	3	DHGHFELLQNEDVFTLVLK3		12304.6	7683.44
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	DHGHFELLQNEDVFTLVLK	DHGHFELLQNEDVFTLVLK	4	DHGHFELLQNEDVFTLVLK4	14185	11310.5	16725.6
A0A8I6G6W8	A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	DHGISLSEPR	DHGISLSEPR	2	DHGISLSEPR2	7440.36	11911.9	10041.2
A0A0G2K1A2	D3ZSY4;A0A0G2K1A2	A0A0G2K1A2_RAT	Mpo	Myeloperoxidase	0	DHGLPGYNAWR	DHGLPGYNAWR	2	DHGLPGYNAWR2	15361.6	6379.35	
A0A0G2K1A2	D3ZSY4;A0A0G2K1A2	A0A0G2K1A2_RAT	Mpo	Myeloperoxidase	0	DHGLPGYNAWR	DHGLPGYNAWR	3	DHGLPGYNAWR3	23628.7	8140.64	9182.24
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	DHGTPSSPFAGVVLKPAASR	DHGTPSSPFAGVVLKPAASR	3	DHGTPSSPFAGVVLKPAASR3	15266	8972.15	23887.9
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	DHGTPSSPFAGVVLKPAASR	DHGTPSSPFAGVVLKPAASR	4	DHGTPSSPFAGVVLKPAASR4	50874.1	37662.1	54340.1
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	DHHLVVPSVLQGLR	DHHLVVPSVLQGLR	3	DHHLVVPSVLQGLR3	16889.3	17891.3	16108.8
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	DHHLVVPSVLQGLR	DHHLVVPSVLQGLR	4	DHHLVVPSVLQGLR4	2014.9	2418.91	2237.44
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	DHHRHPECYVCTDCGINLK	DHHRHPEC(UniMod:4)YVC(UniMod:4)TDC(UniMod:4)GINLK	4	DHHRHPEC(UniMod:4)YVC(UniMod:4)TDC(UniMod:4)GINLK4	6770.07	15423.6	5922.42
P98193	P98193	DMP1_RAT	Dmp1	Dentin matrix acidic phosphoprotein 1	1	DHHSDEADSRPEAGDSTQDSESEEYR	DHHSDEADSRPEAGDSTQDSESEEYR	4	DHHSDEADSRPEAGDSTQDSESEEYR4	7290.02	12583.9	7132.69
Q80YN4	Q80YN4	CORIN_RAT	Corin	Atrial natriuretic peptide-converting enzyme	1	DHHVCADGWQETLSQLACR	DHHVC(UniMod:4)ADGWQETLSQLAC(UniMod:4)R	4	DHHVC(UniMod:4)ADGWQETLSQLAC(UniMod:4)R4	3907.87	4816.93	5211.73
Q8K3P7	Q8K3P7	HINT3_RAT	Hint3	Adenosine 5'-monophosphoramidase HINT3	1	DHIEMVESMVTVGK	DHIEMVESMVTVGK	2	DHIEMVESMVTVGK2	3569.66	3976.7	
Q8K3P7	Q8K3P7	HINT3_RAT	Hint3	Adenosine 5'-monophosphoramidase HINT3	1	DHIEMVESMVTVGK	DHIEMVESMVTVGK	3	DHIEMVESMVTVGK3	18878.8	9733.83	11118.2
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	DHIIDDALVR	DHIIDDALVR	3	DHIIDDALVR3	5069.69		8881.5
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	DHIIDDVISFIR	DHIIDDVISFIR	2	DHIIDDVISFIR2	1.25092e+06	1.02631e+06	763004
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	DHIIDDVISFIR	DHIIDDVISFIR	3	DHIIDDVISFIR3	1.22528e+06	808854	713371
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	DHILAILALR	DHILAILALR	2	DHILAILALR2	34806.8	45547.2	44110.3
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	DHILAILALRR	DHILAILALRR	3	DHILAILALRR3		5537.84	8013.94
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	DHILLPTSIYPVTR	DHILLPTSIYPVTR	2	DHILLPTSIYPVTR2	18292.4	22661.2	14919.6
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	DHILLPTSIYPVTR	DHILLPTSIYPVTR	3	DHILLPTSIYPVTR3	48520.9	30021	39470.2
D4ACD2	D4ACD2	D4ACD2_RAT	Bach1	BTB domain and CNC homolog 1	1	DHILSTLGETK	DHILSTLGETK	2	DHILSTLGETK2	4891.71	2788.41	4238.65
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	DHINDIIK	DHINDIIK	2	DHINDIIK2	30383.9	31473.9	29158.4
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	DHINLPGFCGQNPLR	DHINLPGFC(UniMod:4)GQNPLR	2	DHINLPGFC(UniMod:4)GQNPLR2	29330.1	16356.5	20509.5
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	DHINLPGFCGQNPLR	DHINLPGFC(UniMod:4)GQNPLR	3	DHINLPGFC(UniMod:4)GQNPLR3	126845	124358	137068
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	DHINLPGFCGQNPLRGPNDER	DHINLPGFC(UniMod:4)GQNPLRGPNDER	3	DHINLPGFC(UniMod:4)GQNPLRGPNDER3	10548.7	8860.02	5304.81
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	DHINLPGFCGQNPLRGPNDER	DHINLPGFC(UniMod:4)GQNPLRGPNDER	4	DHINLPGFC(UniMod:4)GQNPLRGPNDER4	10921.3	3480.9	8924.21
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	DHKPPELTEGSK	DHKPPELTEGSK	3	DHKPPELTEGSK3	10578.3	10503.2	8126.89
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	DHLEEEIK	DHLEEEIK	2	DHLEEEIK2	10999.5	12038.2	9665.36
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	DHLENPDFR	DHLENPDFR	2	DHLENPDFR2	32039.8	35444.6	30298.1
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	DHLENPDFR	DHLENPDFR	3	DHLENPDFR3	74113.3	79313.1	80345.1
D4A7N1	D4A7N1	MIC25_RAT	Chchd6	MICOS complex subunit Mic25	1	DHLHEVLLCSDLAK	DHLHEVLLC(UniMod:4)SDLAK	3	DHLHEVLLC(UniMod:4)SDLAK3	18525.7	37222.9	46803.1
D4A7N1	D4A7N1	MIC25_RAT	Chchd6	MICOS complex subunit Mic25	1	DHLHEVLLCSDLAK	DHLHEVLLC(UniMod:4)SDLAK	4	DHLHEVLLC(UniMod:4)SDLAK4	17035.1		23819.8
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	DHLLFLR	DHLLFLR	2	DHLLFLR2	6673.86	4640.19	5954.4
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	DHLLGVSDSGK	DHLLGVSDSGK	2	DHLLGVSDSGK2	20413	22054.4	29799.3
O08557	O08557	DDAH1_RAT	Ddah1	N(G),N(G)-dimethylarginine dimethylaminohydrolase 1	1	DHLLIPVSNSEMEK	DHLLIPVSNSEMEK	3	DHLLIPVSNSEMEK3	4407.6		6482.2
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	DHLLSISLSGYINYLDKNNPSKPLR	DHLLSISLSGYINYLDKNNPSKPLR	4	DHLLSISLSGYINYLDKNNPSKPLR4	14129.4	8112.84	12644.3
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	DHLMLYPYHLSDIMVK	DHLMLYPYHLSDIMVK	3	DHLMLYPYHLSDIMVK3	2036.93	3406.25	3713.68
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	DHLMLYPYHLSDIMVK	DHLMLYPYHLSDIMVK	4	DHLMLYPYHLSDIMVK4	9184.76	8005.72	10179
D4A6K4	D4A6K4	D4A6K4_RAT	Golga1	Golgin A1	1	DHLTASK	DHLTASK	1	DHLTASK1			7564.22
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	DHLVKATPANLEEAR	DHLVKATPANLEEAR	3	DHLVKATPANLEEAR3	9800.36	14550.1	8899.62
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	DHLVKATPANLEEAR	DHLVKATPANLEEAR	4	DHLVKATPANLEEAR4	2591.51	4364.91	
G3V6L9	G3V6L9	G3V6L9_RAT	Fkbp3	peptidylprolyl isomerase	1	DHLVTAYNHLFESK	DHLVTAYNHLFESK	3	DHLVTAYNHLFESK3		12080.1	14332.7
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	DHLWNELEK	DHLWNELEK	2	DHLWNELEK2	8111.31	7424.21	3142.02
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	DHLYGTLDPNTR	DHLYGTLDPNTR	2	DHLYGTLDPNTR2	107610	107294	88435.6
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	DHLYGTLDPNTR	DHLYGTLDPNTR	3	DHLYGTLDPNTR3	161803	209234	204568
A0A0G2JWD0	A0A0G2JWD0	A0A0G2JWD0_RAT	Prom1	Prominin 1	1	DHLYGVHNPVMTSPSR	DHLYGVHNPVMTSPSR	3	DHLYGVHNPVMTSPSR3	5632.24	4056.27	
A0A0G2JWD0	A0A0G2JWD0	A0A0G2JWD0_RAT	Prom1	Prominin 1	1	DHLYGVHNPVMTSPSR	DHLYGVHNPVMTSPSR	4	DHLYGVHNPVMTSPSR4			6086.05
A0A0G2JWD0	A0A0G2JWD0	A0A0G2JWD0_RAT	Prom1	Prominin 1	1	DHLYGVHNPVMTSPSRY	DHLYGVHNPVMTSPSRY	4	DHLYGVHNPVMTSPSRY4		2492.36	6041.05
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	DHLYSTVCKPR	DHLYSTVC(UniMod:4)KPR	3	DHLYSTVC(UniMod:4)KPR3	45499.1	35015.5	48049.4
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	DHMGHLLYQLVQSEK	DHMGHLLYQLVQSEK	3	DHMGHLLYQLVQSEK3	6260.8	8618.73	3978.55
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	DHMGHLLYQLVQSEK	DHMGHLLYQLVQSEK	4	DHMGHLLYQLVQSEK4			6230.19
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	DHMGSVMAQVR	DHMGSVMAQVR	2	DHMGSVMAQVR2	9431.05	8891.47	11018.6
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	DHMGSVMAQVR	DHMGSVMAQVR	3	DHMGSVMAQVR3	6244.05	11064	9725.49
O35314	O35314	SCG1_RAT	Chgb	Secretogranin-1	1	DHNEEMVTR	DHNEEMVTR	2	DHNEEMVTR2	12571.7	12371.6	11288.2
P23711	P23711	HMOX2_RAT	Hmox2	Heme oxygenase 2	1	DHPAFAPLYFPTELHR	DHPAFAPLYFPTELHR	3	DHPAFAPLYFPTELHR3	50516.5	45518.3	47973.9
P23711	P23711	HMOX2_RAT	Hmox2	Heme oxygenase 2	1	DHPAFAPLYFPTELHR	DHPAFAPLYFPTELHR	4	DHPAFAPLYFPTELHR4	31076.9	24631.7	33556.4
P37285	A0A8I5Y868;Q5PQM2;P37285	KLC1_RAT	Klc1	Kinesin light chain 1	0	DHPAVAATLNNLAVLYGK	DHPAVAATLNNLAVLYGK	2	DHPAVAATLNNLAVLYGK2	10010	4948.5	9713
P37285	A0A8I5Y868;Q5PQM2;P37285	KLC1_RAT	Klc1	Kinesin light chain 1	0	DHPAVAATLNNLAVLYGK	DHPAVAATLNNLAVLYGK	3	DHPAVAATLNNLAVLYGK3	113755	118874	125742
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	DHPDVAK	DHPDVAK	1	DHPDVAK1			1900.92
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	DHPDVAK	DHPDVAK	2	DHPDVAK2			53269
P63281	P63281;A0A8I5ZZH6	UBC9_RAT	Ube2i	SUMO-conjugating enzyme UBC9	0	DHPFGFVAVPTK	DHPFGFVAVPTK	3	DHPFGFVAVPTK3	15978.3	8125.09	5611.54
F7FA09	F7FA09	F7FA09_RAT	Pex11b	Peroxisomal biogenesis factor 11 beta	1	DHPPLLLDVLR	DHPPLLLDVLR	3	DHPPLLLDVLR3	4032.55	5203.54	3808.04
A0A8I6AQR3	A0A8I6AQR3	A0A8I6AQR3_RAT	Tmem263	Transmembrane protein 263	1	DHPQQQPGMLSR	DHPQQQPGMLSR	2	DHPQQQPGMLSR2	6527.57	2446.39	4234.97
A0A8I6AQR3	A0A8I6AQR3	A0A8I6AQR3_RAT	Tmem263	Transmembrane protein 263	1	DHPQQQPGMLSR	DHPQQQPGMLSR	3	DHPQQQPGMLSR3	70473.6	69061.4	50732.2
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	DHQPCIIFMDEIDAIGGR	DHQPC(UniMod:4)IIFMDEIDAIGGR	3	DHQPC(UniMod:4)IIFMDEIDAIGGR3	27117.2	29666.2	23082.9
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	DHQPCIIFMDEIDAIGGRR	DHQPC(UniMod:4)IIFMDEIDAIGGRR	3	DHQPC(UniMod:4)IIFMDEIDAIGGRR3	5151.15	14882.7	6456.12
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	DHQPCIIFMDEIDAIGGRR	DHQPC(UniMod:4)IIFMDEIDAIGGRR	4	DHQPC(UniMod:4)IIFMDEIDAIGGRR4	13459.5	18083.2	16620
O08629	O08629	TIF1B_RAT	Trim28	Transcription intermediary factor 1-beta	1	DHQYQFLEDAVR	DHQYQFLEDAVR	3	DHQYQFLEDAVR3	5175.37		2242.47
Q9R1Q2	Q9R1Q2	CCNL1_RAT	Ccnl1	Cyclin-L1	1	DHSDVTK	DHSDVTK	2	DHSDVTK2			8133.34
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	DHSFLGFEWQK	DHSFLGFEWQK	2	DHSFLGFEWQK2	128873	115400	208981
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	DHSFLGFEWQK	DHSFLGFEWQK	3	DHSFLGFEWQK3	279610	215859	210627
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	DHSGTLGPEEFK	DHSGTLGPEEFK	2	DHSGTLGPEEFK2	75000.7	43258.3	44040
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	DHSGTLGPEEFK	DHSGTLGPEEFK	3	DHSGTLGPEEFK3	316715	252528	286893
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	DHSHYCVCPEGR	DHSHYC(UniMod:4)VC(UniMod:4)PEGR	3	DHSHYC(UniMod:4)VC(UniMod:4)PEGR3	2521.03	2513.21	5133.22
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	DHSKEPPYGADILR	DHSKEPPYGADILR	3	DHSKEPPYGADILR3	15943		9753.22
Q6AXS4	Q6AXS4	RENR_RAT	Atp6ap2	Renin receptor	1	DHSPDLYSLELAGLDELGK	DHSPDLYSLELAGLDELGK	3	DHSPDLYSLELAGLDELGK3	10712.1	8927.03	13111.3
Q4G086	Q4G086	Q4G086_RAT	Bnip3l	BCL2 interacting protein 3 like	1	DHSSQSEEEVVDGEKEVEALKK	DHSSQSEEEVVDGEKEVEALKK	4	DHSSQSEEEVVDGEKEVEALKK4	7357.69	3564.63	
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	DHSVFQR	DHSVFQR	2	DHSVFQR2	80638.3	77551.9	72054.4
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	DHTGGPYCNECLPGFYGDPTR	DHTGGPYC(UniMod:4)NEC(UniMod:4)LPGFYGDPTR	3	DHTGGPYC(UniMod:4)NEC(UniMod:4)LPGFYGDPTR3	38337.6	50001.6	43094.5
A0A8J8YRV3	A0A8J8YRV3	A0A8J8YRV3_RAT	Drg1	Developmentally regulated GTP binding protein 1	1	DHTLEDEDVIQIVK	DHTLEDEDVIQIVK	3	DHTLEDEDVIQIVK3	12388.7	12546.4	10482.5
D3ZG43	D3ZG43	D3ZG43_RAT	Ndufs3	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial	1	DHTNAQFK	DHTNAQFK	2	DHTNAQFK2	39142.7		28418
D3ZLZ7	D3ZLZ7	IMDH1_RAT	Impdh1	Inosine-5'-monophosphate dehydrogenase 1	1	DHTTLLSEVMTPR	DHTTLLSEVMTPR	3	DHTTLLSEVMTPR3	4815.31	2147.09	2443.11
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	DHTTLSDIYLNNIIPR	DHTTLSDIYLNNIIPR	2	DHTTLSDIYLNNIIPR2		3787.33	2403
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	DHTTLSDIYLNNIIPR	DHTTLSDIYLNNIIPR	3	DHTTLSDIYLNNIIPR3	31811.4	32365.7	37968.2
Q66HA4	Q66HA4	TAXB1_RAT	Tax1bp1	Tax1-binding protein 1 homolog	1	DHVCEVTK	DHVC(UniMod:4)EVTK	2	DHVC(UniMod:4)EVTK2			7076.8
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	DHVFEDSYR	DHVFEDSYR	2	DHVFEDSYR2	8694.07	4015.96	3838.35
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	DHVFEDSYR	DHVFEDSYR	3	DHVFEDSYR3	7829.69	2260.9	8441.76
Q0PMD2	Q0PMD2	ANTR1_RAT	Antxr1	Anthrax toxin receptor 1	1	DHVFPVNDGFQALQGIIHSILKK	DHVFPVNDGFQALQGIIHSILKK	4	DHVFPVNDGFQALQGIIHSILKK4			2691.67
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	DHVFVRDEAGHGDPRPEPR	DHVFVRDEAGHGDPRPEPR	4	DHVFVRDEAGHGDPRPEPR4	50945	85701	71460.5
P01026	P01026	CO3_RAT	C3	Complement C3	1	DHVLGLAR	DHVLGLAR	2	DHVLGLAR2	1.28915e+06	1.1733e+06	1.08738e+06
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	DHVLTGCSFHWEVENLR	DHVLTGC(UniMod:4)SFHWEVENLR	3	DHVLTGC(UniMod:4)SFHWEVENLR3	89475.9	69297	95663.5
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	DHVLTGCSFHWEVENLR	DHVLTGC(UniMod:4)SFHWEVENLR	4	DHVLTGC(UniMod:4)SFHWEVENLR4	116654	119560	119740
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	DHVTATQLIQK	DHVTATQLIQK	2	DHVTATQLIQK2	2579.06		
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	DHVYLQLHHLPPEQLATR	DHVYLQLHHLPPEQLATR	4	DHVYLQLHHLPPEQLATR4	57404.5	57748.5	63736.3
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	DHYDATYHK	DHYDATYHK	2	DHYDATYHK2	5516.09		56265.5
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	DHYDATYHK	DHYDATYHK	3	DHYDATYHK3			11657.1
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	DHYILQQGER	DHYILQQGER	2	DHYILQQGER2	19717.7	26444.5	17029.3
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	DHYILQQGER	DHYILQQGER	3	DHYILQQGER3	47924.1	53093.3	73971.1
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	DHYLLHVK	DHYLLHVK	2	DHYLLHVK2	3679.49	3075.98	
B2GUZ5	B2GUZ5	CAZA1_RAT	Capza1	F-actin-capping protein subunit alpha-1	1	DHYSNGFCTVYAK	DHYSNGFC(UniMod:4)TVYAK	2	DHYSNGFC(UniMod:4)TVYAK2	19029.5	16685.1	27131.1
B2GUZ5	B2GUZ5	CAZA1_RAT	Capza1	F-actin-capping protein subunit alpha-1	1	DHYSNGFCTVYAK	DHYSNGFC(UniMod:4)TVYAK	3	DHYSNGFC(UniMod:4)TVYAK3	97741.5	88837.5	114270
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	DHYTLVIK	DHYTLVIK	2	DHYTLVIK2	45451	48895.3	38363.1
P63170	P63170;A0A8I6AP61	DYL1_RAT	Dynll1	Dynein light chain 1, cytoplasmic	0	DIAAHIK	DIAAHIK	1	DIAAHIK1	15053.4	9231.66	7450.63
P63170	P63170;A0A8I6AP61	DYL1_RAT	Dynll1	Dynein light chain 1, cytoplasmic	0	DIAAHIK	DIAAHIK	2	DIAAHIK2	411929	437972	446447
A0A8I6GHH3	A0A8I6GHH3	A0A8I6GHH3_RAT	Sh3bgrl	SH3 domain binding glutamate-rich protein like	1	DIAANEENRK	DIAANEENRK	2	DIAANEENRK2			7447.58
P0C2C4	P0C2C4	RM10_RAT	Mrpl10	Large ribosomal subunit protein uL10m	1	DIAAVFR	DIAAVFR	2	DIAAVFR2	11597	8265.4	15285.7
Q68FQ7	Q68FQ7	RPAP3_RAT	Rpap3	RNA polymerase II-associated protein 3	1	DIAAVIKPAEGER	DIAAVIKPAEGER	3	DIAAVIKPAEGER3	13422.8	17475.6	21690.9
Q78P75	Q78P75	DYL2_RAT	Dynll2	Dynein light chain 2, cytoplasmic	1	DIAAYIK	DIAAYIK	1	DIAAYIK1	15638.7	26274.2	13476.2
Q78P75	Q78P75	DYL2_RAT	Dynll2	Dynein light chain 2, cytoplasmic	1	DIAAYIK	DIAAYIK	2	DIAAYIK2	511254	532692	502655
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	DIAEIIK	DIAEIIK	2	DIAEIIK2	8659.42	13980.9	16009
Q561S0	A0A1W2Q6F8;Q561S0	NDUAA_RAT	Ndufa10	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial	0	DIAEQLGMK	DIAEQLGMK	2	DIAEQLGMK2	103675	102875	117510
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	DIAGIGLK	DIAGIGLK	2	DIAGIGLK2	69779.7	81426.2	68270.3
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	DIAIDNICR	DIAIDNIC(UniMod:4)R	2	DIAIDNIC(UniMod:4)R2	23886.2	31970.8	20955.6
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	DIAIEQER	DIAIEQER	2	DIAIEQER2	124376	133118	132459
Q32WR5	Q32WR5	BL1S2_RAT	Bloc1s2	Biogenesis of lysosome-related organelles complex-1 subunit 2	1	DIAINISR	DIAINISR	2	DIAINISR2	43793.5	41171.9	38767.6
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	DIALEITVTNGPSDPR	DIALEITVTNGPSDPR	2	DIALEITVTNGPSDPR2	10646.7	9239.74	6106.08
P18292	P18292	THRB_RAT	F2	Prothrombin	1	DIALLKLK	DIALLKLK	2	DIALLKLK2	8403.18	2958.19	1748.61
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	DIANIVLAVAALLPACRPHVR	DIANIVLAVAALLPAC(UniMod:4)RPHVR	4	DIANIVLAVAALLPAC(UniMod:4)RPHVR4	5341.68		
F1LNH3	F1LNH3	F1LNH3_RAT	Col6a2	Collagen type VI alpha 2 chain	1	DIANTPHELYR	DIANTPHELYR	3	DIANTPHELYR3	10500.4	7266.94	15246
Q4KLL4	Q4KLL4	TM9S4_RAT	Tm9sf4	Transmembrane 9 superfamily member 4	1	DIANYNK	DIANYNK	2	DIANYNK2	62909.6	48726.5	48779.1
Q4KLL4	Q4KLL4	TM9S4_RAT	Tm9sf4	Transmembrane 9 superfamily member 4	1	DIANYNKEDDIEDTMEESGWK	DIANYNKEDDIEDTMEESGWK	3	DIANYNKEDDIEDTMEESGWK3	3429.28		2554.62
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	DIAPTLTLYVGK	DIAPTLTLYVGK	2	DIAPTLTLYVGK2	940931	724919	611203
Q4G069	Q4G069	RMD1_RAT	Rmdn1	Regulator of microtubule dynamics protein 1	1	DIAQLCK	DIAQLC(UniMod:4)K	2	DIAQLC(UniMod:4)K2	23430.2	14882.1	10433.1
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	DIASGLIGLLLICK	DIASGLIGLLLIC(UniMod:4)K	2	DIASGLIGLLLIC(UniMod:4)K2	439166	20927.5	6703.8
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	DIASGLIGLLLICK	DIASGLIGLLLIC(UniMod:4)K	3	DIASGLIGLLLIC(UniMod:4)K3		25590.4	22827.4
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	DIASGLIGPLILCK	DIASGLIGPLILC(UniMod:4)K	2	DIASGLIGPLILC(UniMod:4)K2	1.17312e+06	953730	780647
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	DIASGLIGPLILCK	DIASGLIGPLILC(UniMod:4)K	3	DIASGLIGPLILC(UniMod:4)K3	111821	82982.7	70409.1
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	DIASHVK	DIASHVK	2	DIASHVK2	6410.52	58185.8	
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	DIASLFR	DIASLFR	2	DIASLFR2	28558.1	26222.1	29855.7
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	DIASSPSR	DIASSPSR	2	DIASSPSR2	306194	337147	
Q920H8	Q920H8	HEPH_RAT	Heph	Hephaestin	1	DIATGLIGPLITCK	DIATGLIGPLITC(UniMod:4)K	2	DIATGLIGPLITC(UniMod:4)K2	6126.9		11336.1
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	DIAWTEDSK	DIAWTEDSK	2	DIAWTEDSK2	281939	211370	263761
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	DIAWTEDSKR	DIAWTEDSKR	2	DIAWTEDSKR2	64556.1	51467.5	67022.4
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	DIAWTEDSKR	DIAWTEDSKR	3	DIAWTEDSKR3	226759	212628	239813
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	DIAYLPESGGR	DIAYLPESGGR	2	DIAYLPESGGR2	91396	81135.3	82891.5
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	DIAYLPESGGRPGATK	DIAYLPESGGRPGATK	2	DIAYLPESGGRPGATK2	79254.7	72894.7	74016.7
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	DIAYLPESGGRPGATK	DIAYLPESGGRPGATK	3	DIAYLPESGGRPGATK3	512657	569535	604245
P01026	P01026	CO3_RAT	C3	Complement C3	1	DICEGQVNSLPGSINK	DIC(UniMod:4)EGQVNSLPGSINK	2	DIC(UniMod:4)EGQVNSLPGSINK2	667886	606342	475426
P01026	P01026	CO3_RAT	C3	Complement C3	1	DICEGQVNSLPGSINK	DIC(UniMod:4)EGQVNSLPGSINK	3	DIC(UniMod:4)EGQVNSLPGSINK3	128119	100105	100571
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	DICGSLLQSR	DIC(UniMod:4)GSLLQSR	2	DIC(UniMod:4)GSLLQSR2	78418.8	79901.6	89873.4
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	DICLIGGK	DIC(UniMod:4)LIGGK	1	DIC(UniMod:4)LIGGK1	667.89	1784.86	
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	DICLIGGK	DIC(UniMod:4)LIGGK	2	DIC(UniMod:4)LIGGK2	12892.5	11737.2	12945.1
P63102	P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	1	DICNDVLSLLEK	DIC(UniMod:4)NDVLSLLEK	2	DIC(UniMod:4)NDVLSLLEK2	1.61675e+06	1.29733e+06	1.3374e+06
P63102	P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	1	DICNDVLSLLEK	DIC(UniMod:4)NDVLSLLEK	3	DIC(UniMod:4)NDVLSLLEK3	236732	216956	182960
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	DICQAIWK	DIC(UniMod:4)QAIWK	2	DIC(UniMod:4)QAIWK2	26184.5	32165.3	24352.3
F1LRE5	F1LRE5	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	1	DIDAATEAK	DIDAATEAK	2	DIDAATEAK2	17668.3	14470.9	13519.8
Q63210	Q63210	GNA12_RAT	Gna12	Guanine nucleotide-binding protein subunit alpha-12	1	DIDALLAR	DIDALLAR	2	DIDALLAR2	7779.65	4989.78	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	DIDAVQTWNLEK	DIDAVQTWNLEK	2	DIDAVQTWNLEK2	16997.8	28974	26395.2
Q9WVS2	Q9WVS2	OSGEP_RAT	Osgep	tRNA N6-adenosine threonylcarbamoyltransferase	1	DIDCIAYTK	DIDC(UniMod:4)IAYTK	2	DIDC(UniMod:4)IAYTK2		10444.2	4824.85
O35568	O35568	FBLN3_RAT	Efemp1	EGF-containing fibulin-like extracellular matrix protein 1	1	DIDECDIVPDACK	DIDEC(UniMod:4)DIVPDAC(UniMod:4)K	2	DIDEC(UniMod:4)DIVPDAC(UniMod:4)K2	86431.6	82606.9	78681.6
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	DIDECETGIHNCPPDFICQNTLGSFR	DIDEC(UniMod:4)ETGIHNC(UniMod:4)PPDFIC(UniMod:4)QNTLGSFR	4	DIDEC(UniMod:4)ETGIHNC(UniMod:4)PPDFIC(UniMod:4)QNTLGSFR4	12808.6	13164.9	13382.9
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	DIDECLQNGR	DIDEC(UniMod:4)LQNGR	2	DIDEC(UniMod:4)LQNGR2	17308.8	19353.2	8201.35
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	DIDENAYSK	DIDENAYSK	2	DIDENAYSK2	121672	104731	111016
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	DIDFFSK	DIDFFSK	2	DIDFFSK2	16878.8	17629.8	
D3ZLZ7	D3ZLZ7	IMDH1_RAT	Impdh1	Inosine-5'-monophosphate dehydrogenase 1	1	DIDFLAEK	DIDFLAEK	2	DIDFLAEK2	14437.5	15044.1	17037.7
P36970	P36970;A0A0G2KAD1	GPX4_RAT	Gpx4	Phospholipid hydroperoxide glutathione peroxidase	0	DIDGHMVCLDK	DIDGHMVC(UniMod:4)LDK	3	DIDGHMVC(UniMod:4)LDK3	211071	223026	223107
P36970	P36970;A0A0G2KAD1	GPX4_RAT	Gpx4	Phospholipid hydroperoxide glutathione peroxidase	0	DIDGHMVCLDKYR	DIDGHMVC(UniMod:4)LDKYR	3	DIDGHMVC(UniMod:4)LDKYR3		2463.05	
F7F0H6	F7F0H6	F7F0H6_RAT	Ifgga2l1	Similar to interferon-inducible GTPase	1	DIDGTPLNVAVTGESGAGK	DIDGTPLNVAVTGESGAGK	2	DIDGTPLNVAVTGESGAGK2	3493.83		7679.14
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	DIDIEDLEELDPDFIMAK	DIDIEDLEELDPDFIMAK	3	DIDIEDLEELDPDFIMAK3	12892.4	13083.9	12130.7
Q6IMY8	Q6IMY8	HNRPU_RAT	Hnrnpu	Heterogeneous nuclear ribonucleoprotein U	1	DIDIHEVR	DIDIHEVR	2	DIDIHEVR2	1445.14		
P41565	P41565	IDHG1_RAT	Idh3g	Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial	1	DIDILIVR	DIDILIVR	2	DIDILIVR2	52185	41923.7	45504.9
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	DIDPEDEELELGPR	DIDPEDEELELGPR	2	DIDPEDEELELGPR2	1.16672e+07	1.12054e+07	1.19924e+07
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	DIDPEDEELELGPR	DIDPEDEELELGPR	3	DIDPEDEELELGPR3	299874	284714	315362
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	DIDPPVLIQGNSNR	DIDPPVLIQGNSNR	2	DIDPPVLIQGNSNR2	4981.4	12815.3	10243.5
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	DIDPVHR	DIDPVHR	2	DIDPVHR2	12004.8		13719.8
P08461	A0A8I6B5J2;P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	0	DIDSFVPTK	DIDSFVPTK	2	DIDSFVPTK2	16763.5	12311.9	17184.8
Q62902	Q62902	LMAN1_RAT	Lman1	Protein ERGIC-53	1	DIDSLAQR	DIDSLAQR	2	DIDSLAQR2	154221	138265	157650
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	DIDSLMR	DIDSLMR	2	DIDSLMR2	52497.1	47820.8	49158
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	DIDSLRDPSTQLR	DIDSLRDPSTQLR	3	DIDSLRDPSTQLR3	111653	131318	105880
Q06645;Q06646;Q71S46	Q06645;A0A8I6AI71;A0A8I6ALW6;Q06646;A0A8I5ZXH5;Q71S46	AT5G1_RAT;AT5G2_RAT;AT5G3_RAT	Atp5mc1;Atp5mc2;Atp5mc3	ATP synthase F(0) complex subunit C1, mitochondrial	0	DIDTAAK	DIDTAAK	1	DIDTAAK1	41642.4	38790.8	
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	DIDVFCHFTNAANSSVR	DIDVFC(UniMod:4)HFTNAANSSVR	2	DIDVFC(UniMod:4)HFTNAANSSVR2		2422.87	
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	DIEAMDPSILK	DIEAMDPSILK	2	DIEAMDPSILK2	43521.4	30378.2	39229.2
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	DIEANAEITYAIISGNEHGK	DIEANAEITYAIISGNEHGK	3	DIEANAEITYAIISGNEHGK3	6052.69		4102.95
D4A9L2	D4A9L2	D4A9L2_RAT	Srsf1	Serine/arginine-rich splicing factor 1	1	DIEDVFYK	DIEDVFYK	2	DIEDVFYK2	11639.1	7957.75	10178.8
Q99P63	Q99P63	MICU2_RAT	Micu2	Calcium uptake protein 2, mitochondrial	1	DIEDVLSGIQTAR	DIEDVLSGIQTAR	2	DIEDVLSGIQTAR2	11209.8	11463.9	15710.6
D4A4T0	D4A4T0	D4A4T0_RAT	Stub1	STIP1 homology and U-box containing protein 1	1	DIEEHLQR	DIEEHLQR	2	DIEEHLQR2	5351.3	4894.76	699.792
P19234	P19234	NDUV2_RAT	Ndufv2	NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial	1	DIEEIIDELR	DIEEIIDELR	2	DIEEIIDELR2	46004.8	50563.3	59330.3
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	DIEGFLEENQNK	DIEGFLEENQNK	2	DIEGFLEENQNK2	32924.6	21196.2	27786.8
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	DIEGFLEENQNK	DIEGFLEENQNK	3	DIEGFLEENQNK3	3364.74	2935.33	
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	DIEIDALSQK	DIEIDALSQK	2	DIEIDALSQK2	9261.13	6514.02	6918.03
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	DIELLYPYK	DIELLYPYK	2	DIELLYPYK2	20420.5	16110	16252.5
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	DIELQIR	DIELQIR	2	DIELQIR2	31829.9		
G3V6K3	G3V6K3	G3V6K3_RAT	Exosc7	Exosome component 7	1	DIELSDDPYDCIR	DIELSDDPYDC(UniMod:4)IR	2	DIELSDDPYDC(UniMod:4)IR2	5173.55	5370.15	7633.89
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	DIELSPEAQAK	DIELSPEAQAK	2	DIELSPEAQAK2	47360.5	53052.4	56642.7
M0R9L0	M0R9L0	M0R9L0_RAT	Naca	Nascent polypeptide associated complex subunit alpha	1	DIELVMSQANVSR	DIELVMSQANVSR	2	DIELVMSQANVSR2	163800	182509	175482
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	DIEMFLESSR	DIEMFLESSR	2	DIEMFLESSR2	35107.1	29106.6	44943.3
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	DIEREDIEFICK	DIEREDIEFIC(UniMod:4)K	2	DIEREDIEFIC(UniMod:4)K2	8918.04	10976.3	14608.1
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	DIEREDIEFICK	DIEREDIEFIC(UniMod:4)K	3	DIEREDIEFIC(UniMod:4)K3	177123	183514	148839
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	DIESLMSEGNK	DIESLMSEGNK	2	DIESLMSEGNK2	11156.1	20398	16341.1
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	DIETQVQQDGLWEAGR	DIETQVQQDGLWEAGR	2	DIETQVQQDGLWEAGR2	3144.92	4755.78	3770.18
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	DIETQVQQDGLWEAGR	DIETQVQQDGLWEAGR	3	DIETQVQQDGLWEAGR3	2590.81	4159.17	5388.96
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	DIETSLQR	DIETSLQR	2	DIETSLQR2	319386	349751	314604
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	DIEVEPVQQGEK	DIEVEPVQQGEK	2	DIEVEPVQQGEK2	28755	28554.5	25407.4
A0A8I6AIH6	A0A8I6AIH6	A0A8I6AIH6_RAT	Suclg2	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial	1	DIFAMDDK	DIFAMDDK	1	DIFAMDDK1	2385.38		2265.11
A0A8I6AIH6	A0A8I6AIH6	A0A8I6AIH6_RAT	Suclg2	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial	1	DIFAMDDK	DIFAMDDK	2	DIFAMDDK2	137590	128488	153027
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	DIFAQQR	DIFAQQR	2	DIFAQQR2	115984	105193	119610
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	DIFDSLQK	DIFDSLQK	2	DIFDSLQK2	288491	297645	292379
Q6AXQ4	Q6AXQ4	MTM1_RAT	Mtm1	Myotubularin	1	DIFDVLTR	DIFDVLTR	2	DIFDVLTR2		7223.88	11753.8
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	DIFGDACDNCR	DIFGDAC(UniMod:4)DNC(UniMod:4)R	2	DIFGDAC(UniMod:4)DNC(UniMod:4)R2	223431	182628	247878
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	DIFHDLIACVTMDNLQER	DIFHDLIAC(UniMod:4)VTMDNLQER	3	DIFHDLIAC(UniMod:4)VTMDNLQER3	12033.6	5906.24	1982
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	DIFQEIFDK	DIFQEIFDK	2	DIFQEIFDK2	79062.3	64891.5	80764.5
P41562	P41562	IDHC_RAT	Idh1	Isocitrate dehydrogenase [NADP] cytoplasmic	1	DIFQEIYDK	DIFQEIYDK	2	DIFQEIYDK2	7517.45	6385.1	2952.95
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	DIFQLHLTCK	DIFQLHLTC(UniMod:4)K	3	DIFQLHLTC(UniMod:4)K3	19738.2	15812.7	20994.9
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	DIFTGLIGPMK	DIFTGLIGPMK	2	DIFTGLIGPMK2	1.78455e+06	1.10265e+06	1.11783e+06
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	DIFTPNDER	DIFTPNDER	2	DIFTPNDER2	47604.9	47770.3	37259.3
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	DIFVTSK	DIFVTSK	1	DIFVTSK1	14623.7	12132.3	13403.1
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	DIFVTSK	DIFVTSK	2	DIFVTSK2	547528	664016	611256
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	DIGLPNGLTFDPFSK	DIGLPNGLTFDPFSK	2	DIGLPNGLTFDPFSK2	54311.4	63974.8	84875.5
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	DIGLPVTHR	DIGLPVTHR	2	DIGLPVTHR2	33246.3	24263.9	24794.8
P63039	A0A8I5ZVK6;A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	DIGNIISDAMK	DIGNIISDAMK	2	DIGNIISDAMK2	37972.9	26266.4	27360.3
P63039	A0A8I5ZVK6;A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	DIGNIISDAMKK	DIGNIISDAMKK	3	DIGNIISDAMKK3	18021.3	10171	14946.3
Q63016	Q63016	LAT1_RAT	Slc7a5	Large neutral amino acids transporter small subunit 1	1	DIGQGDASNLHQK	DIGQGDASNLHQK	3	DIGQGDASNLHQK3	18441.3	12267.5	21058
Q66H84	Q66H84	MAPK3_RAT	Mapkapk3	MAP kinase-activated protein kinase 3	1	DIGTAIQFLHSQNIAHR	DIGTAIQFLHSQNIAHR	3	DIGTAIQFLHSQNIAHR3	28444	28086.4	35961.8
Q66H84	Q66H84	MAPK3_RAT	Mapkapk3	MAP kinase-activated protein kinase 3	1	DIGTAIQFLHSQNIAHR	DIGTAIQFLHSQNIAHR	4	DIGTAIQFLHSQNIAHR4	17247.8	12284.2	17419
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	DIGVQPHVWVR	DIGVQPHVWVR	2	DIGVQPHVWVR2	4730.62	2180.22	
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	DIGVQPHVWVR	DIGVQPHVWVR	3	DIGVQPHVWVR3	44370.3	50497.2	33924.9
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	DIHDDQDYLHSLGK	DIHDDQDYLHSLGK	3	DIHDDQDYLHSLGK3	15572.8	19467.6	16022.1
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	DIHDDQDYLHSLGK	DIHDDQDYLHSLGK	4	DIHDDQDYLHSLGK4	26363.5	13818.3	15005.1
A0A096MJE3	A0A096MJE3	A0A096MJE3_RAT	Gspt2	G1 to S phase transition 2	1	DIHFMPCSGLTGANIK	DIHFMPC(UniMod:4)SGLTGANIK	2	DIHFMPC(UniMod:4)SGLTGANIK2	33569.7	29104.1	25755.4
A0A096MJE3	A0A096MJE3	A0A096MJE3_RAT	Gspt2	G1 to S phase transition 2	1	DIHFMPCSGLTGANIK	DIHFMPC(UniMod:4)SGLTGANIK	3	DIHFMPC(UniMod:4)SGLTGANIK3	57555.5	56234.3	60608.2
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	DIHFMPCSGLTGANLK	DIHFMPC(UniMod:4)SGLTGANLK	2	DIHFMPC(UniMod:4)SGLTGANLK2	33569.7	29104.1	25755.4
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	DIHFMPCSGLTGANLK	DIHFMPC(UniMod:4)SGLTGANLK	3	DIHFMPC(UniMod:4)SGLTGANLK3	57555.5	56234.3	60608.2
B5DFC3	B5DFC3	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	1	DIHGQFK	DIHGQFK	2	DIHGQFK2	21296.4	7617.99	
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	DIHIQTMDLVSQETGEK	DIHIQTMDLVSQETGEK	2	DIHIQTMDLVSQETGEK2	3156.55	3125.74	4807.45
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	DIHIQTMDLVSQETGEK	DIHIQTMDLVSQETGEK	3	DIHIQTMDLVSQETGEK3	86979.1	93687	88408.7
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	DIHLEMENLVNSR	DIHLEMENLVNSR	3	DIHLEMENLVNSR3	1757.11	3593.74	4953.51
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	DIHNIYGLYVHMATADGLIQR	DIHNIYGLYVHMATADGLIQR	3	DIHNIYGLYVHMATADGLIQR3	35793.7	42952.3	52065.5
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	DIHNIYGLYVHMATADGLIQR	DIHNIYGLYVHMATADGLIQR	4	DIHNIYGLYVHMATADGLIQR4	85801.5	94993.8	90912
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	DIHNLEDIKK	DIHNLEDIKK	2	DIHNLEDIKK2	11311	9188.83	7466.69
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	DIHNLEDIKK	DIHNLEDIKK	3	DIHNLEDIKK3	92346.6	108084	90740.4
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	DIHSGLIGPLLICR	DIHSGLIGPLLIC(UniMod:4)R	2	DIHSGLIGPLLIC(UniMod:4)R2	1.46967e+06	1.67979e+06	1.42533e+06
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	DIHSGLIGPLLICR	DIHSGLIGPLLIC(UniMod:4)R	3	DIHSGLIGPLLIC(UniMod:4)R3	9.02609e+06	1.04933e+07	1.05927e+07
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	DIHSGLIGPLLICR	DIHSGLIGPLLIC(UniMod:4)R	4	DIHSGLIGPLLIC(UniMod:4)R4	7304.98	6318.55	11317.7
A0A8I6AW91	A0A8I6AW91	A0A8I6AW91_RAT	Srp72	Signal recognition particle subunit SRP72	1	DIHTLAQLISAYSLVDPEK	DIHTLAQLISAYSLVDPEK	3	DIHTLAQLISAYSLVDPEK3	2324.28	1198.88	5518.91
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	DIIACGFDVNK	DIIAC(UniMod:4)GFDVNK	2	DIIAC(UniMod:4)GFDVNK2	21104.2	19100.8	16066.3
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	DIIAEETPVLTQTLPEGK	DIIAEETPVLTQTLPEGK	2	DIIAEETPVLTQTLPEGK2	32899.8	38817.3	33094.4
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	DIIAEETPVLTQTLPEGK	DIIAEETPVLTQTLPEGK	3	DIIAEETPVLTQTLPEGK3	12459.3	14400.9	13837.4
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	DIIALNPLYR	DIIALNPLYR	2	DIIALNPLYR2	33764.1	31993	33276.3
P09895	A0A8I6AAE6;P09895	RL5_RAT	Rpl5	Large ribosomal subunit protein uL18	0	DIICQIAYAR	DIIC(UniMod:4)QIAYAR	2	DIIC(UniMod:4)QIAYAR2	16948.6	22944.8	14024.7
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	DIIEDEDGVAMPHQWLEGNLPVSAK	DIIEDEDGVAMPHQWLEGNLPVSAK	3	DIIEDEDGVAMPHQWLEGNLPVSAK3	68986.3	81883.2	85059.2
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	DIIEYAELK	DIIEYAELK	2	DIIEYAELK2	9227.94	7055.74	4979.21
P49432	P49432	ODPB_RAT	Pdhb	Pyruvate dehydrogenase E1 component subunit beta, mitochondrial	1	DIIFAIK	DIIFAIK	2	DIIFAIK2	169802	157250	150887
D3ZY46	G3V982;D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	0	DIIFELR	DIIFELR	2	DIIFELR2	37484.9	23187.4	26386
P62919	P62919;D4A6W6	RL8_RAT	Rpl8	Large ribosomal subunit protein uL2	0	DIIHDPGR	DIIHDPGR	2	DIIHDPGR2	15280.5	16873.5	10371.9
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	DIILFSFK	DIILFSFK	2	DIILFSFK2	13286.7	12902.2	16555.1
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	DIILPFR	DIILPFR	2	DIILPFR2	154033	127079	167570
Q63356	D4A7X9;Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	0	DIILQSNPLLEAFGNAK	DIILQSNPLLEAFGNAK	2	DIILQSNPLLEAFGNAK2	20361.9	25908	25504.2
Q63356	D4A7X9;Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	0	DIILQSNPLLEAFGNAK	DIILQSNPLLEAFGNAK	3	DIILQSNPLLEAFGNAK3	8181.84	7706.33	8961.36
Q6P7P5	Q6P7P5	5MP2_RAT	Bzw1	eIF5-mimic protein 2	1	DIILYVK	DIILYVK	1	DIILYVK1	9489.89		
Q6P7P5	Q6P7P5	5MP2_RAT	Bzw1	eIF5-mimic protein 2	1	DIILYVK	DIILYVK	2	DIILYVK2	41853.9	51073	32217.8
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	DIINEEEVQFLK	DIINEEEVQFLK	2	DIINEEEVQFLK2	4975.03	10716	8895.19
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	DIINMLFYHDR	DIINMLFYHDR	3	DIINMLFYHDR3	7304.47	3230.52	5915.47
Q01460	Q01460	DIAC_RAT	Ctbs	Di-N-acetylchitobiase	1	DIINPTFR	DIINPTFR	2	DIINPTFR2	13721.7		20802.9
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	DIIPLGEK	DIIPLGEK	2	DIIPLGEK2	35988.1	22005.1	32729.4
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	DIIPTQMQR	DIIPTQMQR	2	DIIPTQMQR2	263224	253156	270537
Q6MG21	Q6MG21	SYVM_RAT	Vars2	Valine--tRNA ligase, mitochondrial	1	DIISGQELQVLQAK	DIISGQELQVLQAK	2	DIISGQELQVLQAK2	4154.32		
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	DIIYIGGAPDVATLTR	DIIYIGGAPDVATLTR	2	DIIYIGGAPDVATLTR2	5863.32	1469.56	8200.68
P60711	P60711;P63259;A0A8I5Y704	ACTB_RAT	Actb	Actin, cytoplasmic 1	0	DIKEKLCYVALDFEQEMATAASSSSLEK	DIKEKLC(UniMod:4)YVALDFEQEMATAASSSSLEK	4	DIKEKLC(UniMod:4)YVALDFEQEMATAASSSSLEK4	11567	10338.7	6435.51
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	DIKETTVLVAQDGNIK	DIKETTVLVAQDGNIK	3	DIKETTVLVAQDGNIK3	1246.6	4381.76	3659.49
Q8K3P7	Q8K3P7	HINT3_RAT	Hint3	Adenosine 5'-monophosphoramidase HINT3	1	DIKPAALHHYLVVPK	DIKPAALHHYLVVPK	3	DIKPAALHHYLVVPK3	8021.82		4706.13
Q8K3P7	Q8K3P7	HINT3_RAT	Hint3	Adenosine 5'-monophosphoramidase HINT3	1	DIKPAALHHYLVVPK	DIKPAALHHYLVVPK	4	DIKPAALHHYLVVPK4	19818.5	15737.4	12707.6
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	DIKPDNILMDMNGHIR	DIKPDNILMDMNGHIR	4	DIKPDNILMDMNGHIR4	4758.09	6718.99	4863.31
A0A8I5ZLY4	A0A8I5ZLY4	A0A8I5ZLY4_RAT	Stk38	Serine/threonine kinase 38	1	DIKPDNLLLDSK	DIKPDNLLLDSK	3	DIKPDNLLLDSK3	4659.52		5847.01
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	DIKPDNVLLDVNGHIR	DIKPDNVLLDVNGHIR	3	DIKPDNVLLDVNGHIR3	30405.7	22548.4	18307.5
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	DIKPDNVLLDVNGHIR	DIKPDNVLLDVNGHIR	4	DIKPDNVLLDVNGHIR4	21712.7	19961.4	17840.8
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	DIKPENLLVCEYPDGTK	DIKPENLLVC(UniMod:4)EYPDGTK	3	DIKPENLLVC(UniMod:4)EYPDGTK3	21793	31759.5	15930.3
Q9Z335	Q9Z335	SBK1_RAT	Sbk1	Serine/threonine-protein kinase SBK1	1	DIKPENVLLFDR	DIKPENVLLFDR	3	DIKPENVLLFDR3	3908.84	7310.65	4443.74
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	DIKPQLELIEDEEK	DIKPQLELIEDEEK	3	DIKPQLELIEDEEK3	15753.2	22570.3	18462.9
P18266	P18266	GSK3B_RAT	Gsk3b	Glycogen synthase kinase-3 beta	1	DIKPQNLLLDPDTAVLK	DIKPQNLLLDPDTAVLK	2	DIKPQNLLLDPDTAVLK2	3166.5	2838.42	
P18266	P18266	GSK3B_RAT	Gsk3b	Glycogen synthase kinase-3 beta	1	DIKPQNLLLDPDTAVLK	DIKPQNLLLDPDTAVLK	3	DIKPQNLLLDPDTAVLK3	25700.1	33871.4	27824.9
P18265	P18265	GSK3A_RAT	Gsk3a	Glycogen synthase kinase-3 alpha	1	DIKPQNLLVDPDTAVLK	DIKPQNLLVDPDTAVLK	3	DIKPQNLLVDPDTAVLK3	2731.62	5146.76	5407.39
P30839	P30839	AL3A2_RAT	Aldh3a2	Aldehyde dehydrogenase family 3 member A2	1	DILAAIAADLSK	DILAAIAADLSK	2	DILAAIAADLSK2	9497.92	4765.45	7878.01
D3ZXK7	D3ZXK7	RN123_RAT	Rnf123	E3 ubiquitin-protein ligase RNF123	1	DILAELTK	DILAELTK	2	DILAELTK2		21866.3	27188.3
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	DILAQSPAAEPLK	DILAQSPAAEPLK	2	DILAQSPAAEPLK2	66434.8	94357.6	54057.3
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	DILATINVILDK	DILATINVILDK	2	DILATINVILDK2	8722.11	8322.08	12084.8
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	DILATNGVIHFIDELLIPDSAK	DILATNGVIHFIDELLIPDSAK	3	DILATNGVIHFIDELLIPDSAK3	30791	24723.5	25312.4
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	DILCQALAAYAAACQAAGIK	DILC(UniMod:4)QALAAYAAAC(UniMod:4)QAAGIK	3	DILC(UniMod:4)QALAAYAAAC(UniMod:4)QAAGIK3	84496.3	56024.1	71792.1
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	DILDKPQSVCCLHTMLSLLSK	DILDKPQSVC(UniMod:4)C(UniMod:4)LHTMLSLLSK	4	DILDKPQSVC(UniMod:4)C(UniMod:4)LHTMLSLLSK4	5103.53	7355.36	
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	DILEDVVTSAVK	DILEDVVTSAVK	2	DILEDVVTSAVK2	63427.5	54887.8	44416.3
D3ZYT9	D3ZYT9	D3ZYT9_RAT	Fbxl8	F-box and leucine-rich repeat protein 8	1	DILGALHTVCGAAHQLR	DILGALHTVC(UniMod:4)GAAHQLR	3	DILGALHTVC(UniMod:4)GAAHQLR3	2161.22	2087.52	
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	DILGASDPYVR	DILGASDPYVR	2	DILGASDPYVR2	99844.9	133909	108991
A0A8I5ZN89	A0A8I5ZN89	A0A8I5ZN89_RAT	Gcdh	Glutaryl-CoA dehydrogenase	1	DILGGNGISDEYHVIR	DILGGNGISDEYHVIR	3	DILGGNGISDEYHVIR3	7134.47	5306.27	4323.86
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	DILIEHYK	DILIEHYK	2	DILIEHYK2	35063.6	32231.1	39237.9
P62250	A0A8I5XVG9;P62250;A0A8I5YCD9	RS16_RAT	Rps16	Small ribosomal subunit protein uS9	0	DILIQYDR	DILIQYDR	2	DILIQYDR2	35086.1	33626.2	33819.7
A0A8I6A182	A0A8I6A182	A0A8I6A182_RAT	Pitpnc1	Phosphatidylinositol transfer protein, cytoplasmic 1	1	DILLIGHR	DILLIGHR	2	DILLIGHR2	20505.6	28351.5	25731.9
P20761	P20761	IGG2B_RAT	Igh-1a	Ig gamma-2B chain C region	1	DILLISQNAK	DILLISQNAK	2	DILLISQNAK2	6.27134e+06	6.14619e+06	6.60369e+06
A0A8I5ZRT6	A0A8I5ZRT6;A0A8I6GIX8	A0A8I5ZRT6_RAT	Dock2	Dedicator of cytokinesis 2	0	DILLPVITK	DILLPVITK	2	DILLPVITK2	3544.99	3399.73	4152.92
P20070	P20070	NB5R3_RAT	Cyb5r3	NADH-cytochrome b5 reductase 3	1	DILLRPELEELR	DILLRPELEELR	3	DILLRPELEELR3	367892	321838	287028
P20070	P20070	NB5R3_RAT	Cyb5r3	NADH-cytochrome b5 reductase 3	1	DILLRPELEELRNEHSSR	DILLRPELEELRNEHSSR	4	DILLRPELEELRNEHSSR4	40964.8	33630.5	30055.8
B2GUZ7	B2GUZ7	B2GUZ7_RAT	Tbcc	Tubulin folding cofactor C	1	DILLSDLTNCTVR	DILLSDLTNC(UniMod:4)TVR	2	DILLSDLTNC(UniMod:4)TVR2	15592	10634.3	
Q9JIK1	Q9JIK1	CDHR5_RAT	Cdhr5	Cadherin-related family member 5	1	DILLTTVPMETER	DILLTTVPMETER	2	DILLTTVPMETER2	7076.63	4887.09	7413.17
B4F7E8	B4F7E8	NIBA2_RAT	Niban2	Protein Niban 2	1	DILQAVK	DILQAVK	2	DILQAVK2	57893.8	43510.8	31831
Q62931	Q62931	GOSR1_RAT	Gosr1	Golgi SNAP receptor complex member 1	1	DILQDYTHEFHK	DILQDYTHEFHK	3	DILQDYTHEFHK3	61677.1	62882.3	61984.1
Q62931	Q62931	GOSR1_RAT	Gosr1	Golgi SNAP receptor complex member 1	1	DILQDYTHEFHK	DILQDYTHEFHK	4	DILQDYTHEFHK4	4900.85		
Q8VHF5	Q8VHF5	CISY_RAT	Cs	Citrate synthase, mitochondrial	1	DILSNLIPK	DILSNLIPK	2	DILSNLIPK2	635646	542607	607065
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	DILSQQQGEHVAR	DILSQQQGEHVAR	3	DILSQQQGEHVAR3	15240.6	8052.86	11370
P01026	P01026	CO3_RAT	C3	Complement C3	1	DILSSHNQYGILPLSWNIPELVNMGQWK	DILSSHNQYGILPLSWNIPELVNMGQWK	4	DILSSHNQYGILPLSWNIPELVNMGQWK4		18877.9	
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	DILSVMAK	DILSVMAK	2	DILSVMAK2	76084.6	75588.6	63507.6
A0A8I5ZN24	A0A8I5ZN24	A0A8I5ZN24_RAT	Dhrs7	Dehydrogenase/reductase 7	1	DILVLPLDLTDTSSHEAATK	DILVLPLDLTDTSSHEAATK	3	DILVLPLDLTDTSSHEAATK3	36806.7	33281.6	32328.2
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	DILVPSFYPK	DILVPSFYPK	2	DILVPSFYPK2	73676.1	87498.6	78754.7
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	DILYIGDHIFGDILK	DILYIGDHIFGDILK	2	DILYIGDHIFGDILK2	8757.3	9155.01	3903.01
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	DILYIGDHIFGDILK	DILYIGDHIFGDILK	3	DILYIGDHIFGDILK3	57460.3	74139.8	58438.8
A0A0G2JUU7	A0A0G2JUU7	A0A0G2JUU7_RAT	Tubgcp3	Gamma-tubulin complex component	1	DILYVFQGIDGK	DILYVFQGIDGK	2	DILYVFQGIDGK2	10508.3	9268.06	4719.58
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	DIMDAQR	DIMDAQR	2	DIMDAQR2	58183.8	56921.3	53058
A0A0G2K6C7	A0A0G2K6C7	A0A0G2K6C7_RAT	Trim5	Tripartite motif-containing 5	1	DIMDSEEK	DIMDSEEK	2	DIMDSEEK2	37162.5	55815.3	52139.2
F1LT49	F1LT49	F1LT49_RAT	Lrrc47	Leucine rich repeat containing 47	1	DIMDSLVLK	DIMDSLVLK	2	DIMDSLVLK2	11845.6	16460.6	18312.2
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	DIMEDAIDNR	DIMEDAIDNR	2	DIMEDAIDNR2	28781.4	21914.3	25412.2
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	DIMEDAIDNRLDSK	DIMEDAIDNRLDSK	3	DIMEDAIDNRLDSK3	26623.3	23438.6	25663.2
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	DIMEDTIEDK	DIMEDTIEDK	2	DIMEDTIEDK2	81870.9	53027.6	78211.6
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	DIMLATGK	DIMLATGK	2	DIMLATGK2	38756.4	37782.9	51191.8
G3V8W9	G3V8W9	G3V8W9_RAT	Tstd3	Thiosulfate sulfurtransferase like domain containing 3	1	DIMLIDVR	DIMLIDVR	2	DIMLIDVR2	28223.5	18845.2	18878.4
Q0Z843	Q0Z843	Q0Z843_RAT	Fig4	FIG4 phosphoinositide 5-phosphatase	1	DIMQTLSR	DIMQTLSR	2	DIMQTLSR2	16259.4	5361.99	11635.8
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	DIMSDLQQTNSEK	DIMSDLQQTNSEK	2	DIMSDLQQTNSEK2	54170.9	67549.4	72328.8
Q3B7D1	Q3B7D1	UBE2Z_RAT	Ube2z	Ubiquitin-conjugating enzyme E2 Z	1	DIMSIYK	DIMSIYK	2	DIMSIYK2	45609.7	33400.3	50125.5
Q3B7D1	Q3B7D1	UBE2Z_RAT	Ube2z	Ubiquitin-conjugating enzyme E2 Z	1	DIMSIYKEPPPGMFVVPDTVDMTK	DIMSIYKEPPPGMFVVPDTVDMTK	3	DIMSIYKEPPPGMFVVPDTVDMTK3	4828.56	13126.6	11593.4
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	DIMTHQLNSK	DIMTHQLNSK	2	DIMTHQLNSK2	2716.72		3241.62
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	DIMTHQLNSK	DIMTHQLNSK	3	DIMTHQLNSK3	13740.2	20708	18770.7
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	DIMVTIRPHVLTPFVEECLVAAAGGTR	DIMVTIRPHVLTPFVEEC(UniMod:4)LVAAAGGTR	4	DIMVTIRPHVLTPFVEEC(UniMod:4)LVAAAGGTR4	20129.1	15744.6	11993.3
Q6P7P5	Q6P7P5	5MP2_RAT	Bzw1	eIF5-mimic protein 2	1	DINAVAASLR	DINAVAASLR	2	DINAVAASLR2	215743	266505	209192
O35244	O35244	PRDX6_RAT	Prdx6	Peroxiredoxin-6	1	DINAYNGAAPTEK	DINAYNGAAPTEK	2	DINAYNGAAPTEK2	8588.9	6904.52	8616.73
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	DINDNAPIFNPSTYQGQVLENEVGAR	DINDNAPIFNPSTYQGQVLENEVGAR	3	DINDNAPIFNPSTYQGQVLENEVGAR3	289554	297831	307391
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	DINDNAPK	DINDNAPK	2	DINDNAPK2		37817.7	
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	DINDNRPTFLQTK	DINDNRPTFLQTK	2	DINDNRPTFLQTK2	23610.6	25418.9	19239.8
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	DINDNRPTFLQTK	DINDNRPTFLQTK	3	DINDNRPTFLQTK3	978962	1.04207e+06	930458
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	DINECETPGICMNGR	DINEC(UniMod:4)ETPGIC(UniMod:4)MNGR	2	DINEC(UniMod:4)ETPGIC(UniMod:4)MNGR2	23036.5	30029.5	26930.2
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	DINECETPGICMNGR	DINEC(UniMod:4)ETPGIC(UniMod:4)MNGR	3	DINEC(UniMod:4)ETPGIC(UniMod:4)MNGR3	11092.6	12755.1	5937.26
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	DINECLPSPCK	DINEC(UniMod:4)LPSPC(UniMod:4)K	2	DINEC(UniMod:4)LPSPC(UniMod:4)K2	7399.73	6998.96	11445.8
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	DINEFFTR	DINEFFTR	2	DINEFFTR2	55184.7	42523.9	38071.7
A0A8I5ZYZ8	A0A8I5ZYZ8	A0A8I5ZYZ8_RAT	Ube2m	Ubiquitin-conjugating enzyme E2M	1	DINELNLPK	DINELNLPK	2	DINELNLPK2	21892	17018.3	18759.4
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	DINLDVNR	DINLDVNR	2	DINLDVNR2	126002	161559	128731
D3ZU52	D3ZU52;A0A8I6GIJ6	D3ZU52_RAT	Cops7b	COP9 signalosome subunit 7B	0	DINNIVK	DINNIVK	2	DINNIVK2	43028.6	15356.2	26003.3
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	DINQEVYNFLATAGAK	DINQEVYNFLATAGAK	2	DINQEVYNFLATAGAK2	78567.2	101746	84857
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	DINQEVYNFLATAGAK	DINQEVYNFLATAGAK	3	DINQEVYNFLATAGAK3	20825.4	23094.2	22539.6
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	DINSLYDVSR	DINSLYDVSR	2	DINSLYDVSR2	115497	87851.1	109242
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	DINSVAGVLK	DINSVAGVLK	2	DINSVAGVLK2	32287.9	28001.2	32767.4
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	DINWDSSQWQPLIQDR	DINWDSSQWQPLIQDR	3	DINWDSSQWQPLIQDR3	12749.7	11599.5	13714.7
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	DIPAEQMDFR	DIPAEQMDFR	2	DIPAEQMDFR2	141241	122903	156091
Q6TUD4	Q6TUD4	YIPF3_RAT	Yipf3	Protein YIPF3	1	DIPAVLPAAK	DIPAVLPAAK	2	DIPAVLPAAK2	21412.9	43112.4	31137.6
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	DIPAYSQDTFK	DIPAYSQDTFK	2	DIPAYSQDTFK2	211126	212402	219249
Q7TT49	Q7TT49;O54874	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	0	DIPCIFR	DIPC(UniMod:4)IFR	2	DIPC(UniMod:4)IFR2	113762	105996	112706
D4A4T0	D4A4T0	D4A4T0_RAT	Stub1	STIP1 homology and U-box containing protein 1	1	DIPDYLCGK	DIPDYLC(UniMod:4)GK	2	DIPDYLC(UniMod:4)GK2	18849.2	14833.4	
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	DIPFSAIYFPCYAHVK	DIPFSAIYFPC(UniMod:4)YAHVK	3	DIPFSAIYFPC(UniMod:4)YAHVK3	80604.4	76184.8	69156
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	DIPFSAIYFPVYAHCK	DIPFSAIYFPVYAHC(UniMod:4)K	2	DIPFSAIYFPVYAHC(UniMod:4)K2	10379.8	26167.8	21351.8
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	DIPFSAIYFPVYAHCK	DIPFSAIYFPVYAHC(UniMod:4)K	3	DIPFSAIYFPVYAHC(UniMod:4)K3	10947.3	13767.4	8763.79
P62755	P62755	RS6_RAT	Rps6	Small ribosomal subunit protein eS6	1	DIPGLTDTTVPR	DIPGLTDTTVPR	2	DIPGLTDTTVPR2	105702	135901	79033.3
Q66H94	Q66H94	FKBP9_RAT	Fkbp9	Peptidyl-prolyl cis-trans isomerase FKBP9	1	DIPGQASLVFDVALLDLHNPK	DIPGQASLVFDVALLDLHNPK	3	DIPGQASLVFDVALLDLHNPK3		1351.33	
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	DIPIDGK	DIPIDGK	1	DIPIDGK1	39329.5	24097.2	37641.1
Q9WTR7	Q9WTR7	SC11C_RAT	Sec11c	Signal peptidase complex catalytic subunit SEC11C	1	DIPIVHR	DIPIVHR	2	DIPIVHR2	84819.8	51953.8	53588
Q1HAQ0	Q1HAQ0	PCAT1_RAT	Lpcat1	Lysophosphatidylcholine acyltransferase 1	1	DIPIWGTLIR	DIPIWGTLIR	2	DIPIWGTLIR2	62474.3	63055.2	56866.8
B4F7E7	B4F7E7	PALS1_RAT	Pals1	Protein PALS1	1	DIPLGATVR	DIPLGATVR	2	DIPLGATVR2	43875.4	31750.4	36062
Q9ES54	Q9ES54	NPL4_RAT	Nploc4	Nuclear protein localization protein 4 homolog	1	DIPLGIR	DIPLGIR	2	DIPLGIR2	29919	27220.6	31041.6
Q9Z311	Q9Z311	MECR_RAT	Mecr	Enoyl-[acyl-carrier-protein] reductase, mitochondrial	1	DIPLQSAATLGVNPCTAYR	DIPLQSAATLGVNPC(UniMod:4)TAYR	3	DIPLQSAATLGVNPC(UniMod:4)TAYR3	8314.59	3651.33	9924.38
A0A8I5ZZ89	A0A8I5ZZ89	A0A8I5ZZ89_RAT	Elp3	Elongator complex protein 3	1	DIPMPLVSSGVDHGNLR	DIPMPLVSSGVDHGNLR	3	DIPMPLVSSGVDHGNLR3	21322.6	15606.8	14371.6
P52303	P52303	AP1B1_RAT	Ap1b1	AP-1 complex subunit beta-1	1	DIPNENEAQFQIR	DIPNENEAQFQIR	2	DIPNENEAQFQIR2	192782	215835	186997
P62944	P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	DIPNENELQFQIK	DIPNENELQFQIK	2	DIPNENELQFQIK2	72325.2	76088.2	77906.3
P0CC10	P0CC10	LRC4B_RAT	Lrrc4b	Leucine-rich repeat-containing protein 4B	1	DIPNLTALVR	DIPNLTALVR	2	DIPNLTALVR2	9890.31	9039.45	9108.75
B5DEH2	B5DEH2	ERLN2_RAT	Erlin2	Erlin-2	1	DIPNMFMDSAGGLGK	DIPNMFMDSAGGLGK	2	DIPNMFMDSAGGLGK2	31761.3	25174.9	37219.1
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	DIPPPQIEEACELPECQEDAGNK	DIPPPQIEEAC(UniMod:4)ELPEC(UniMod:4)QEDAGNK	3	DIPPPQIEEAC(UniMod:4)ELPEC(UniMod:4)QEDAGNK3	2201.74		
F1LMQ3	F1LMQ3	F1LMQ3_RAT	Psmd8	26S proteasome non-ATPase regulatory subunit 8	1	DIPSFER	DIPSFER	2	DIPSFER2	106398	106366	116899
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	DIPSVTIPGLIPGVSYEVK	DIPSVTIPGLIPGVSYEVK	3	DIPSVTIPGLIPGVSYEVK3	62412.8	71182.3	67088.5
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	DIPVNPMCIYR	DIPVNPMC(UniMod:4)IYR	2	DIPVNPMC(UniMod:4)IYR2	1.54713e+06	1.54437e+06	1.67163e+06
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	DIPVTGANR	DIPVTGANR	2	DIPVTGANR2	123240	135724	89963.2
D4AAT7	D4AAT7	NNRD_RAT	Naxd	ATP-dependent (S)-NAD(P)H-hydrate dehydratase	1	DIPVVIDADGLWLIAQRPALVHGYQK	DIPVVIDADGLWLIAQRPALVHGYQK	4	DIPVVIDADGLWLIAQRPALVHGYQK4	4975.46	14465.8	
A0A8I5ZNG4	A0A8I5ZNG4	A0A8I5ZNG4_RAT	Rictor	RPTOR independent companion of MTOR, complex 2	1	DIPYFQSK	DIPYFQSK	2	DIPYFQSK2	15024.6	12084.5	11137.6
Q62865	Q62865;Q63085	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	0	DIPYHNR	DIPYHNR	2	DIPYHNR2	204562	180804	151722
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	DIQAPGKPQCFCLR	DIQAPGKPQC(UniMod:4)FC(UniMod:4)LR	3	DIQAPGKPQC(UniMod:4)FC(UniMod:4)LR3	16991.2	19551	20422.2
Q3T1K5	Q3T1K5	CAZA2_RAT	Capza2	F-actin-capping protein subunit alpha-2	1	DIQDSLTVSNEVQTAK	DIQDSLTVSNEVQTAK	2	DIQDSLTVSNEVQTAK2	22690.5	21082.4	25378
Q3T1K5	Q3T1K5	CAZA2_RAT	Capza2	F-actin-capping protein subunit alpha-2	1	DIQDSLTVSNEVQTAK	DIQDSLTVSNEVQTAK	3	DIQDSLTVSNEVQTAK3	16963.3	15325.5	12054.7
Q6AYA6	Q6AYA6	CYBC1_RAT	Cybc1	Cytochrome b-245 chaperone 1	1	DIQDVNVEEEK	DIQDVNVEEEK	2	DIQDVNVEEEK2	19682.6	13888.2	14483.7
Q6AYA6	Q6AYA6	CYBC1_RAT	Cybc1	Cytochrome b-245 chaperone 1	1	DIQDVNVEEEKVR	DIQDVNVEEEKVR	3	DIQDVNVEEEKVR3	8973.49	16531.2	11252.6
P35053	P35053	GPC1_RAT	Gpc1	Glypican-1	1	DIQDYWISLPGTLCSEK	DIQDYWISLPGTLC(UniMod:4)SEK	3	DIQDYWISLPGTLC(UniMod:4)SEK3	11270.6	13101.8	9996.66
D3ZE26	D3ZE26	D3ZE26_RAT	Tmcc2	Transmembrane and coiled-coil domain family 2	1	DIQEAVESCLTR	DIQEAVESC(UniMod:4)LTR	2	DIQEAVESC(UniMod:4)LTR2	20272.1	12153.6	23114.4
P06214	P06214	HEM2_RAT	Alad	Delta-aminolevulinic acid dehydratase	1	DIQEGADILMVKPGLPYLDMVQEVK	DIQEGADILMVKPGLPYLDMVQEVK	3	DIQEGADILMVKPGLPYLDMVQEVK3	7951.32	8339.69	7642.29
Q4V8H8	Q4V8H8	EHD2_RAT	Ehd2	EH domain-containing protein 2	1	DIQGLPR	DIQGLPR	2	DIQGLPR2	8238.2	7296.5	6937.69
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	DIQIPSRK	DIQIPSRK	2	DIQIPSRK2	22305.2	16887.8	13928.3
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	DIQIVER	DIQIVER	2	DIQIVER2	695275	719147	706331
Q9WVH8	Q9WVH8	FBLN5_RAT	Fbln5	Fibulin-5	1	DIQLDLEMITVNTVINFR	DIQLDLEMITVNTVINFR	3	DIQLDLEMITVNTVINFR3		4560.2	2716.91
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	DIQLTVFPSK	DIQLTVFPSK	2	DIQLTVFPSK2	193241	210843	177636
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	DIQMPDGIR	DIQMPDGIR	2	DIQMPDGIR2	263647	278268	269463
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	DIQMPDGIRR	DIQMPDGIRR	3	DIQMPDGIRR3	28721.7	48996.6	35780
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	DIQNQLK	DIQNQLK	2	DIQNQLK2	127048	101736	110576
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	DIQNTQCLLNVEHLSASCPHVTLQFADSK	DIQNTQC(UniMod:4)LLNVEHLSASC(UniMod:4)PHVTLQFADSK	4	DIQNTQC(UniMod:4)LLNVEHLSASC(UniMod:4)PHVTLQFADSK4	47028.1	44020.4	57937.4
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	DIQPEVAEATVPGRPGAELQPK	DIQPEVAEATVPGRPGAELQPK	3	DIQPEVAEATVPGRPGAELQPK3	202848	226925	243873
Q62825	Q62825	EXOC3_RAT	Exoc3	Exocyst complex component 3	1	DIQQSLADVSK	DIQQSLADVSK	2	DIQQSLADVSK2	10039	6372.52	5820.88
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	DIQQTEQLIEQR	DIQQTEQLIEQR	2	DIQQTEQLIEQR2	2185.28	974.511	
Q8CGS4	Q8CGS4	CHMP3_RAT	Chmp3	Charged multivesicular body protein 3	1	DIQREEEK	DIQREEEK	2	DIQREEEK2			32978.3
Q8CGS4	Q8CGS4	CHMP3_RAT	Chmp3	Charged multivesicular body protein 3	1	DIQREEEKVK	DIQREEEKVK	3	DIQREEEKVK3	24161.2	41475.5	46869.5
Q8R3Z7	Q8R3Z7	Q8R3Z7_RAT	Ehd4	EH-domain containing 4	1	DIQSLPQK	DIQSLPQK	2	DIQSLPQK2	95978.9	89222	107782
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	DIQTLLSR	DIQTLLSR	2	DIQTLLSR2	108042	111072	127436
F1LMQ3	F1LMQ3	F1LMQ3_RAT	Psmd8	26S proteasome non-ATPase regulatory subunit 8	1	DIQTNVYIK	DIQTNVYIK	2	DIQTNVYIK2	69465.3	75571.9	58587.1
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	DIQVIVNVPPTVQAR	DIQVIVNVPPTVQAR	2	DIQVIVNVPPTVQAR2	428395	409373	277719
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	DIQVIVNVPPTVQAR	DIQVIVNVPPTVQAR	3	DIQVIVNVPPTVQAR3	147103	149364	159638
Q4KLG9	Q4KLG9	ZFN2B_RAT	Zfand2b	AN1-type zinc finger protein 2B	1	DIQVPVCPLCNVPVPVAR	DIQVPVC(UniMod:4)PLC(UniMod:4)NVPVPVAR	3	DIQVPVC(UniMod:4)PLC(UniMod:4)NVPVPVAR3	8204.18		
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	DIREYLSMLADINGK	DIREYLSMLADINGK	3	DIREYLSMLADINGK3	5811.85	5127.97	6375.99
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	DIRGLASGSAETLPANFR	DIRGLASGSAETLPANFR	3	DIRGLASGSAETLPANFR3		46495.3	
Q3KR59	Q3KR59	UBP10_RAT	Usp10	Ubiquitin carboxyl-terminal hydrolase 10	1	DIRPGAAFEPTYIYR	DIRPGAAFEPTYIYR	3	DIRPGAAFEPTYIYR3	15861	14376.3	18350.5
M0R915	M0R915;A0A8I6GLQ4	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	0	DIRPYLETVLQIK	DIRPYLETVLQIK	3	DIRPYLETVLQIK3	4164.36	4461.59	7409.27
B0BNN4	B0BNN4	B0BNN4_RAT	Cfp	Complement factor properdin	1	DIRVEDCCLNTAYAFQEHDGGLCQSCR	DIRVEDC(UniMod:4)C(UniMod:4)LNTAYAFQEHDGGLC(UniMod:4)QSC(UniMod:4)R	4	DIRVEDC(UniMod:4)C(UniMod:4)LNTAYAFQEHDGGLC(UniMod:4)QSC(UniMod:4)R4	7797.88	6565.91	6244.39
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	DISAMEEAMSASLQQHK	DISAMEEAMSASLQQHK	3	DISAMEEAMSASLQQHK3	32843.9	16589.3	21043.9
A0A8I6ACU9	A0A8I6ACU9	A0A8I6ACU9_RAT	Timm50	Mitochondrial import inner membrane translocase subunit TIM50	1	DISCLNR	DISC(UniMod:4)LNR	2	DISC(UniMod:4)LNR2	31108.7	27756.4	23503.6
A0A8I6ACU9	A0A8I6ACU9	A0A8I6ACU9_RAT	Timm50	Mitochondrial import inner membrane translocase subunit TIM50	1	DISCLNRDPAR	DISC(UniMod:4)LNRDPAR	2	DISC(UniMod:4)LNRDPAR2		7337.63	8196.27
A0A8I6ACU9	A0A8I6ACU9	A0A8I6ACU9_RAT	Timm50	Mitochondrial import inner membrane translocase subunit TIM50	1	DISCLNRDPAR	DISC(UniMod:4)LNRDPAR	3	DISC(UniMod:4)LNRDPAR3	94060.3	70262	89272.8
F1M3G7	F1M3G7	AKP13_RAT	Akap13	A-kinase anchor protein 13	1	DISDLLNQEK	DISDLLNQEK	2	DISDLLNQEK2		7067.29	12512.8
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	DISDMTPDSR	DISDMTPDSR	2	DISDMTPDSR2	31602.6	24151	34903.6
P62856	D3Z8D7;P62856;D3ZJ54;A0A0G2K743	RS26_RAT	Rps26	Small ribosomal subunit protein eS26	0	DISEASVFDAYVLPK	DISEASVFDAYVLPK	2	DISEASVFDAYVLPK2	27006.3	17403.9	15259.8
D3ZXD8	D3ZXD8	TM245_RAT	Tmem245	Transmembrane protein 245	1	DISEDLK	DISEDLK	1	DISEDLK1	2198.49	948.171	3435.15
D3ZXD8	D3ZXD8	TM245_RAT	Tmem245	Transmembrane protein 245	1	DISEDLK	DISEDLK	2	DISEDLK2	178251	206630	235709
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	DISEFQHEEFYR	DISEFQHEEFYR	2	DISEFQHEEFYR2	1950.69		3161.37
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	DISEFQHEEFYR	DISEFQHEEFYR	3	DISEFQHEEFYR3	36736.2	39477.8	64161.4
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	DISENKR	DISENKR	2	DISENKR2			3462.21
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	DISFQGGDLSTVFTPSATYCQLVCTHHPR	DISFQGGDLSTVFTPSATYC(UniMod:4)QLVC(UniMod:4)THHPR	4	DISFQGGDLSTVFTPSATYC(UniMod:4)QLVC(UniMod:4)THHPR4	8579.43	1364.64	5742.76
E9PT83	E9PT83	E9PT83_RAT	Cenpf	Centromere protein F	1	DISLDSYK	DISLDSYK	2	DISLDSYK2		152429	
Q63716	Q63716;A0A0G2K3Z9	PRDX1_RAT	Prdx1	Peroxiredoxin-1	0	DISLSDYK	DISLSDYK	2	DISLSDYK2	158436	158263	137393
D4AEK9	D4AEK9	D4AEK9_RAT	Ccdc6	Coiled-coil domain containing 6	1	DISMEIDSPENMMR	DISMEIDSPENMMR	2	DISMEIDSPENMMR2	32867.9	31791.5	22431.3
P36972	P36972	APT_RAT	Aprt	Adenine phosphoribosyltransferase	1	DISPLLKDPDSFR	DISPLLKDPDSFR	3	DISPLLKDPDSFR3	26118.2	22707.7	34230.6
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	DISQDSLQDIK	DISQDSLQDIK	2	DISQDSLQDIK2	97169.5	83078.1	89542.5
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	DISQNFPTK	DISQNFPTK	2	DISQNFPTK2	303675	379220	296501
F1M0U4	F1M0U4	F1M0U4_RAT	ENSRNOG00000066892	Ig-like domain-containing protein	1	DISQSILYLQMNTLK	DISQSILYLQMNTLK	2	DISQSILYLQMNTLK2	8885.12	4.48251e+06	4.49039e+06
F1M0U4	F1M0U4	F1M0U4_RAT	ENSRNOG00000066892	Ig-like domain-containing protein	1	DISQSILYLQMNTLK	DISQSILYLQMNTLK	3	DISQSILYLQMNTLK3	3.84145e+06	4.65436e+06	4.47425e+06
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	DISSHLDVTALCHK	DISSHLDVTALC(UniMod:4)HK	3	DISSHLDVTALC(UniMod:4)HK3	31636.7	31900.1	23212.1
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	DISSHLDVTALCHK	DISSHLDVTALC(UniMod:4)HK	4	DISSHLDVTALC(UniMod:4)HK4	12538.9	11393	8432.74
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	DISSIGLK	DISSIGLK	2	DISSIGLK2	531274	633820	563054
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	DISSSGPCEVMDTER	DISSSGPC(UniMod:4)EVMDTER	2	DISSSGPC(UniMod:4)EVMDTER2	4429.74	4442.78	6479.17
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	DISTLNSGK	DISTLNSGK	1	DISTLNSGK1	1984.64		3598.09
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	DISTLNSGK	DISTLNSGK	2	DISTLNSGK2	365515	320957	306256
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	DISTLNSGKK	DISTLNSGKK	2	DISTLNSGKK2	24645.6	26973.8	27363.5
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	DISTNYYASQK	DISTNYYASQK	2	DISTNYYASQK2	2.28015e+06	2.6996e+06	2.78218e+06
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	DISTNYYASQK	DISTNYYASQK	3	DISTNYYASQK3	37328.9	51596	54120.9
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	DISTNYYASQKK	DISTNYYASQKK	2	DISTNYYASQKK2	5214.8	8418.76	8177.83
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	DISTNYYASQKK	DISTNYYASQKK	3	DISTNYYASQKK3	66224	98729	69346.5
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	DISVGGMCICYGHAR	DISVGGMC(UniMod:4)IC(UniMod:4)YGHAR	2	DISVGGMC(UniMod:4)IC(UniMod:4)YGHAR2	4234.01		
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	DISVGGMCICYGHAR	DISVGGMC(UniMod:4)IC(UniMod:4)YGHAR	3	DISVGGMC(UniMod:4)IC(UniMod:4)YGHAR3	17701.9	16413.1	15926.9
Q6P691	Q6P691	Q6P691_RAT	C2cd2	C2 calcium-dependent domain containing 2	1	DISVQAISCHSAPVSK	DISVQAISC(UniMod:4)HSAPVSK	3	DISVQAISC(UniMod:4)HSAPVSK3	25874.2	26854.7	18546.6
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	DISWFSPNGEK	DISWFSPNGEK	2	DISWFSPNGEK2	115214	92458.7	112060
D4AA31	D4AA31	D4AA31_RAT	Prcp	Prolylcarboxypeptidase	1	DITDTLVAINIPEGAHHLDLR	DITDTLVAINIPEGAHHLDLR	3	DITDTLVAINIPEGAHHLDLR3	10831.6	5108.79	7569.58
D4AA31	D4AA31	D4AA31_RAT	Prcp	Prolylcarboxypeptidase	1	DITDTLVAINIPEGAHHLDLR	DITDTLVAINIPEGAHHLDLR	4	DITDTLVAINIPEGAHHLDLR4	51832.8	41103.1	43820
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	DITDTTALITWSK	DITDTTALITWSK	2	DITDTTALITWSK2	145183	181319	170368
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	DITDTTALITWSK	DITDTTALITWSK	3	DITDTTALITWSK3	16437.1	24000.2	16330.3
M0RD03	M0RD03;A0A8I6AEK1	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	0	DITEEIMSGAR	DITEEIMSGAR	2	DITEEIMSGAR2	205989	243313	208320
D3ZUB7	D3ZUB7	D3ZUB7_RAT	Anapc4	Anaphase-promoting complex subunit 4	1	DITFVAEFLTEHFNEAPDLYNR	DITFVAEFLTEHFNEAPDLYNR	3	DITFVAEFLTEHFNEAPDLYNR3			3231.66
P36876	P36876	2ABA_RAT	Ppp2r2a	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	1	DITLEASR	DITLEASR	2	DITLEASR2	18005.4	17696.6	7131.89
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	DITLECVSSGEPR	DITLEC(UniMod:4)VSSGEPR	2	DITLEC(UniMod:4)VSSGEPR2	10536	8688.46	16162.3
Q925N6	Q925N6	IGSF1_RAT	Igsf1	Immunoglobulin superfamily member 1	1	DITLQCR	DITLQC(UniMod:4)R	2	DITLQC(UniMod:4)R2	24289.9	21584.3	30470.4
A0A0G2KAU4	A0A0G2KAU4	A0A0G2KAU4_RAT	Rasgrp3	RAS guanyl releasing protein 3	1	DITLVTGSSR	DITLVTGSSR	2	DITLVTGSSR2	19047	23201.1	16131.9
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	DITNGKPFFK	DITNGKPFFK	3	DITNGKPFFK3	28783.2	18600	23310.6
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	DITPLQVVLPNTALHLK	DITPLQVVLPNTALHLK	2	DITPLQVVLPNTALHLK2	14956.2	18022.8	15472.7
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	DITPLQVVLPNTALHLK	DITPLQVVLPNTALHLK	3	DITPLQVVLPNTALHLK3	68662.8	43915.8	51186.8
D4A533	D4A533	D4A533_RAT	Tapt1	Transmembrane anterior posterior transformation 1	1	DITQENSELK	DITQENSELK	2	DITQENSELK2	9607.49	12477.4	18730.4
P07150	P07150	ANXA1_RAT	Anxa1	Annexin A1	1	DITSDTSGDFR	DITSDTSGDFR	2	DITSDTSGDFR2	3777.07		
A0A8I5ZQ72	A0A8I5ZQ72;D4ACQ4	A0A8I5ZQ72_RAT	Zc3h12c	Zinc finger CCCH type containing 12C	0	DITVFVPAWR	DITVFVPAWR	2	DITVFVPAWR2	6173.76	9826.52	5433.84
Q4V7C7	A0A8I6GL35;Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	0	DITYFIQQLLR	DITYFIQQLLR	2	DITYFIQQLLR2	86476.4	35130.5	25688.1
Q4V7C7	A0A8I6GL35;Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	0	DITYFIQQLLR	DITYFIQQLLR	3	DITYFIQQLLR3	10438.9		
Q07205	Q07205;A0A8I6AVQ3	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	DIVAEAER	DIVAEAER	2	DIVAEAER2	38502.4	32922.7	36665.5
Q6P686	Q6P686	OSTF1_RAT	Ostf1	Osteoclast-stimulating factor 1	1	DIVEVLFTQPNVELNQQNK	DIVEVLFTQPNVELNQQNK	3	DIVEVLFTQPNVELNQQNK3	94233.9	84632.4	96304.4
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	DIVEYAELK	DIVEYAELK	2	DIVEYAELK2	19608.4	29090.5	26527.7
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	DIVHSGLAYTMER	DIVHSGLAYTMER	2	DIVHSGLAYTMER2	26569.8	20688.9	37466.9
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	DIVHSGLAYTMER	DIVHSGLAYTMER	3	DIVHSGLAYTMER3	157854	148401	184229
Q32PX2	Q32PX2	AIMP2_RAT	Aimp2	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2	1	DIVINANPASPPLSLLVLHR	DIVINANPASPPLSLLVLHR	3	DIVINANPASPPLSLLVLHR3	34801.1	28827.3	34380.4
F1LYU4	F1LYU4	F1LYU4_RAT	ENSRNOG00000071026	Ig-like domain-containing protein	1	DIVLTQSPALAVSLGQR	DIVLTQSPALAVSLGQR	2	DIVLTQSPALAVSLGQR2	48538.8	55804.3	43502.4
F1LYU4	F1LYU4	F1LYU4_RAT	ENSRNOG00000071026	Ig-like domain-containing protein	1	DIVLTQSPALAVSLGQR	DIVLTQSPALAVSLGQR	3	DIVLTQSPALAVSLGQR3	39482.7	33452.6	40075.9
A0A8I6AB22	A0A8I6AB22	A0A8I6AB22_RAT	ENSRNOG00000067079	Ig-like domain-containing protein	1	DIVLTQSPATLSVTPGESVSLSCR	DIVLTQSPATLSVTPGESVSLSC(UniMod:4)R	3	DIVLTQSPATLSVTPGESVSLSC(UniMod:4)R3	58743.4	41038.5	53100.5
A0A8I6GA77	A0A8I6GA77	A0A8I6GA77_RAT	ENSRNOG00000070134	Ig-like domain-containing protein	1	DIVLTQSPVLAVSLGQR	DIVLTQSPVLAVSLGQR	2	DIVLTQSPVLAVSLGQR2	12725.3	15137.6	15811.8
A0A8I6GA77	A0A8I6GA77	A0A8I6GA77_RAT	ENSRNOG00000070134	Ig-like domain-containing protein	1	DIVLTQSPVLAVSLGQR	DIVLTQSPVLAVSLGQR	3	DIVLTQSPVLAVSLGQR3	8596.21	10986.2	14770.1
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	DIVNGLR	DIVNGLR	2	DIVNGLR2	627361	511233	616693
O70595	O70595	ABCB6_RAT	Abcb6	ATP-binding cassette sub-family B member 6	1	DIVNLLTSK	DIVNLLTSK	2	DIVNLLTSK2	4372.31	4273.56	8977.71
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	DIVPGDIVEIAVGDK	DIVPGDIVEIAVGDK	2	DIVPGDIVEIAVGDK2	48036.3	37944	44548
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	DIVPGDIVEIAVGDKVPADIR	DIVPGDIVEIAVGDKVPADIR	3	DIVPGDIVEIAVGDKVPADIR3	67949.7	67470.9	80086.5
P18596	P18596;Q64578	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	0	DIVPGDIVEVAVGDK	DIVPGDIVEVAVGDK	2	DIVPGDIVEVAVGDK2	252750	186430	198698
P18596	P18596;Q64578	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	0	DIVPGDIVEVAVGDK	DIVPGDIVEVAVGDK	3	DIVPGDIVEVAVGDK3	6976.42	6330.01	10492.5
Q64578	Q64578	AT2A1_RAT	Atp2a1	Sarcoplasmic/endoplasmic reticulum calcium ATPase 1	1	DIVPGDIVEVAVGDKVPADIR	DIVPGDIVEVAVGDKVPADIR	3	DIVPGDIVEVAVGDKVPADIR3	71870.4	91876.4	80470.7
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	DIVPGDIVEVAVGDKVPADLR	DIVPGDIVEVAVGDKVPADLR	3	DIVPGDIVEVAVGDKVPADLR3	71870.4	91876.4	80470.7
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	DIVPTLR	DIVPTLR	2	DIVPTLR2	117690	128801	115324
D3ZLA3	A0A8I5ZLG6;D3ZGN2;B5DEX3;Q5BJS7;D3ZLA3;H1UBN0;A0A8I6GKR1;F1M1L9;D4ACG7	D3ZLA3_RAT	Cpne3	Copine 3	0	DIVQFVPFR	DIVQFVPFR	2	DIVQFVPFR2	51551.3	49497.3	50869.6
D4A1R8	D4A1R8	CPNE1_RAT	Cpne1	Copine-1	1	DIVQFVPYR	DIVQFVPYR	2	DIVQFVPYR2	30476.2	24802.8	20343.7
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	DIVTESSK	DIVTESSK	2	DIVTESSK2	70964.6	89666	85896.7
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	DIVTVANAVFVR	DIVTVANAVFVR	2	DIVTVANAVFVR2	90611.5	84438.4	83722.5
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	DIVTVANAVFVR	DIVTVANAVFVR	3	DIVTVANAVFVR3	8170.66	9092.64	10595.6
I6L9G5	I6L9G5	RCN3_RAT	Rcn3	Reticulocalbin-3	1	DIVVAETLEDLDK	DIVVAETLEDLDK	2	DIVVAETLEDLDK2	10366.2	10236.6	10917
I6L9G5	I6L9G5	RCN3_RAT	Rcn3	Reticulocalbin-3	1	DIVVAETLEDLDKNK	DIVVAETLEDLDKNK	2	DIVVAETLEDLDKNK2	22731.7	32419.3	16934.4
I6L9G5	I6L9G5	RCN3_RAT	Rcn3	Reticulocalbin-3	1	DIVVAETLEDLDKNK	DIVVAETLEDLDKNK	3	DIVVAETLEDLDKNK3	136821	174270	142101
P48004	P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	1	DIVVLGVEK	DIVVLGVEK	1	DIVVLGVEK1	32158.9	20063.3	19529.7
P48004	P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	1	DIVVLGVEK	DIVVLGVEK	2	DIVVLGVEK2	1.18285e+06	1.08872e+06	1.16589e+06
P48004	P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	1	DIVVLGVEKK	DIVVLGVEKK	2	DIVVLGVEKK2	24124.8	29842.1	35181.7
D3ZQI6	D3ZQI6	D3ZQI6_RAT	Xpo4	Exportin 4	1	DIVWFLK	DIVWFLK	2	DIVWFLK2	14297	20765	18571.1
A0A8I5ZN89	A0A8I5ZN89	A0A8I5ZN89_RAT	Gcdh	Glutaryl-CoA dehydrogenase	1	DIVYEMGELGVLGPTIK	DIVYEMGELGVLGPTIK	2	DIVYEMGELGVLGPTIK2		1974.23	5933.28
P07824	P07824	ARGI1_RAT	Arg1	Arginase-1	1	DIVYIGLR	DIVYIGLR	2	DIVYIGLR2	9466.45	4681.74	8635.41
F1LQ00	F1LQ00	F1LQ00_RAT	Col5a2	Collagen type V alpha 2 chain	1	DIWKPSPCQICVCDNGAILCDK	DIWKPSPC(UniMod:4)QIC(UniMod:4)VC(UniMod:4)DNGAILC(UniMod:4)DK	3	DIWKPSPC(UniMod:4)QIC(UniMod:4)VC(UniMod:4)DNGAILC(UniMod:4)DK3	31506.6	27952.1	21856.2
P08689	P08689	SHBG_RAT	Shbg	Sex hormone-binding globulin	1	DIWLGHQAQLSTSAR	DIWLGHQAQLSTSAR	2	DIWLGHQAQLSTSAR2		2873.4	
P08689	P08689	SHBG_RAT	Shbg	Sex hormone-binding globulin	1	DIWLGHQAQLSTSAR	DIWLGHQAQLSTSAR	3	DIWLGHQAQLSTSAR3	10450.9	12880.1	16053.1
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	DIWPTRDEIQEVER	DIWPTRDEIQEVER	3	DIWPTRDEIQEVER3	22443.3	21623.4	30121.5
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	DIYDQGGEQAIK	DIYDQGGEQAIK	2	DIYDQGGEQAIK2	18536.5	15896.1	19416.1
Q9ET64	Q9ET64	NSMA_RAT	Smpd2	Sphingomyelin phosphodiesterase 2	1	DIYFAHR	DIYFAHR	2	DIYFAHR2	24887.9	23346.5	30268.2
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	DIYFLPFQDQLK	DIYFLPFQDQLK	2	DIYFLPFQDQLK2	10473.7	8525.44	19951.9
Q9ERE6	Q9ERE6	MPRIP_RAT	Mprip	Myosin phosphatase Rho-interacting protein	1	DIYTELSIAK	DIYTELSIAK	2	DIYTELSIAK2			9746.88
Q62812	Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	DKADFCIIHYAGK	DKADFC(UniMod:4)IIHYAGK	3	DKADFC(UniMod:4)IIHYAGK3	8828.5	15867.1	11310.5
Q62812	Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	DKADFCIIHYAGK	DKADFC(UniMod:4)IIHYAGK	4	DKADFC(UniMod:4)IIHYAGK4	6652.54	8208.48	5218.14
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	DKAPGQLECETAIAALNSCLR	DKAPGQLEC(UniMod:4)ETAIAALNSC(UniMod:4)LR	3	DKAPGQLEC(UniMod:4)ETAIAALNSC(UniMod:4)LR3	2.01581e+06	2.10612e+06	2.16937e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	DKAPGQLECETAIAALNSCLR	DKAPGQLEC(UniMod:4)ETAIAALNSC(UniMod:4)LR	4	DKAPGQLEC(UniMod:4)ETAIAALNSC(UniMod:4)LR4	11893.6	18142.9	24336
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	DKAVFGCHETYK	DKAVFGC(UniMod:4)HETYK	2	DKAVFGC(UniMod:4)HETYK2	7112.13	8373.76	8855.25
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	DKAVFGCHETYK	DKAVFGC(UniMod:4)HETYK	3	DKAVFGC(UniMod:4)HETYK3	171743	181373	218399
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	DKCQCPPNFTGK	DKC(UniMod:4)QC(UniMod:4)PPNFTGK	2	DKC(UniMod:4)QC(UniMod:4)PPNFTGK2	3297.57	5157.88	1476.45
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	DKCQCPPNFTGK	DKC(UniMod:4)QC(UniMod:4)PPNFTGK	3	DKC(UniMod:4)QC(UniMod:4)PPNFTGK3	60086.4	72631.6	75279.9
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	DKDALWQK	DKDALWQK	2	DKDALWQK2	15758.6	23038.8	13903.1
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	DKDAYSSFGSR	DKDAYSSFGSR	2	DKDAYSSFGSR2	11142.4	8269.17	8137.99
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	DKDAYSSFGSR	DKDAYSSFGSR	3	DKDAYSSFGSR3	29143.2	29985.5	36263.9
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	DKDDDEVFEK	DKDDDEVFEK	2	DKDDDEVFEK2	20874.4	13791	23454.5
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	DKDDDEVFEK	DKDDDEVFEK	3	DKDDDEVFEK3	61926.3	86745.3	67348.6
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	DKDDDEVFEKK	DKDDDEVFEKK	3	DKDDDEVFEKK3	5600.42	9612.63	
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	DKDDDVPQFTSAGENFNK	DKDDDVPQFTSAGENFNK	3	DKDDDVPQFTSAGENFNK3	4151.87	9714.7	4528.82
Q9QZM5	Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	1	DKDDELSFK	DKDDELSFK	2	DKDDELSFK2	43237.6	36514.4	39520.1
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	DKDDLGPDR	DKDDLGPDR	2	DKDDLGPDR2		6976.61	
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	DKDGKPLLPEPEETSK	DKDGKPLLPEPEETSK	2	DKDGKPLLPEPEETSK2	1245.74	2062.28	
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	DKDGKPLLPEPEETSK	DKDGKPLLPEPEETSK	3	DKDGKPLLPEPEETSK3	57188.6	68818.8	75436.4
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	DKDGKPLLPK	DKDGKPLLPK	2	DKDGKPLLPK2	8121.68	4065.08	6984.45
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	DKDGQLQTVPVAADQQEVTIEGLQPGR	DKDGQLQTVPVAADQQEVTIEGLQPGR	3	DKDGQLQTVPVAADQQEVTIEGLQPGR3	75860.8	94844.2	68858.9
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	DKDGQLQTVPVAADQQEVTIEGLQPGR	DKDGQLQTVPVAADQQEVTIEGLQPGR	4	DKDGQLQTVPVAADQQEVTIEGLQPGR4	4380.16	3717.91	3626.44
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	DKDGQLQTVPVAADQQEVTIEGLQPGRK	DKDGQLQTVPVAADQQEVTIEGLQPGRK	4	DKDGQLQTVPVAADQQEVTIEGLQPGRK4	166228	208187	168166
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	DKDISWFSPNGEK	DKDISWFSPNGEK	2	DKDISWFSPNGEK2	162182	165268	160630
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	DKDISWFSPNGEK	DKDISWFSPNGEK	3	DKDISWFSPNGEK3	696671	679987	724965
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	DKDLFGGLPK	DKDLFGGLPK	2	DKDLFGGLPK2	9550.18	15853.5	7055.42
A0A8I6AGL0	A0A8I6AGL0	A0A8I6AGL0_RAT	Ankrd44	Ankyrin repeat domain 44	1	DKDLNTPLHLAISK	DKDLNTPLHLAISK	4	DKDLNTPLHLAISK4	3292.18	4409.71	4163.8
Q5M7U6	Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	1	DKDNFWMTR	DKDNFWMTR	2	DKDNFWMTR2	141402	126739	121973
Q5M7U6	Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	1	DKDNFWMTR	DKDNFWMTR	3	DKDNFWMTR3	542705	560912	612672
D3ZUV2	D3ZUV2	D3ZUV2_RAT	Mib1	RING-type E3 ubiquitin transferase	1	DKDNTNVNADVQK	DKDNTNVNADVQK	3	DKDNTNVNADVQK3	1739.24	4651	5183.67
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	DKDPILR	DKDPILR	2	DKDPILR2	136498	130144	121217
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	DKDTIVR	DKDTIVR	2	DKDTIVR2		32362.3	
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	DKDTLSIHYLMLPHVR	DKDTLSIHYLMLPHVR	4	DKDTLSIHYLMLPHVR4	21423.8	20831.2	16060.4
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	DKEAAVQLINNYVK	DKEAAVQLINNYVK	2	DKEAAVQLINNYVK2	296793	264982	239682
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	DKEAAVQLINNYVK	DKEAAVQLINNYVK	3	DKEAAVQLINNYVK3	1.94738e+06	2.04608e+06	2.09725e+06
P18395	P18395	CSDE1_RAT	Csde1	Cold shock domain-containing protein E1	1	DKEAEDGIIAYDDCGVK	DKEAEDGIIAYDDC(UniMod:4)GVK	3	DKEAEDGIIAYDDC(UniMod:4)GVK3	6332.9		9802.37
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	DKEDLVCSAALHSPQESPVGK	DKEDLVC(UniMod:4)SAALHSPQESPVGK	4	DKEDLVC(UniMod:4)SAALHSPQESPVGK4	2618.18		
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	DKEEEMEVAMQK	DKEEEMEVAMQK	2	DKEEEMEVAMQK2	6384.83	5212.32	5949.25
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	DKEEEMEVAMQK	DKEEEMEVAMQK	3	DKEEEMEVAMQK3	65210.2	68251.3	69742.2
Q5CZZ9	Q5CZZ9	PI51B_RAT	Pip5k1b	Phosphatidylinositol 4-phosphate 5-kinase type-1 beta	1	DKEEEPLQNAPDAK	DKEEEPLQNAPDAK	3	DKEEEPLQNAPDAK3		3891.49	7560.05
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	DKEEEVIQDIQEEK	DKEEEVIQDIQEEK	3	DKEEEVIQDIQEEK3	5152.14	11097.3	10121.6
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	DKEFIPQAFGMPLSQVIANDR	DKEFIPQAFGMPLSQVIANDR	3	DKEFIPQAFGMPLSQVIANDR3	70024.1	79903.2	66193.3
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	DKEFQSHLTSHEK	DKEFQSHLTSHEK	3	DKEFQSHLTSHEK3	5548.12	2161.82	
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	DKEGIQNAK	DKEGIQNAK	2	DKEGIQNAK2			4959.37
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	DKEGQPHVVPVEGPER	DKEGQPHVVPVEGPER	3	DKEGQPHVVPVEGPER3	7988.06	5157.49	8723.27
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	DKEGQPHVVPVEGPER	DKEGQPHVVPVEGPER	4	DKEGQPHVVPVEGPER4		11732	9702.17
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	DKEGVAPLLGPASPTR	DKEGVAPLLGPASPTR	3	DKEGVAPLLGPASPTR3	29291.3	21180.4	14311.4
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	DKEIIAEYDTQVK	DKEIIAEYDTQVK	3	DKEIIAEYDTQVK3	3699	5727.52	3973.76
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	DKEIIAEYEAQIK	DKEIIAEYEAQIK	2	DKEIIAEYEAQIK2	5728.41	2594.67	2673.23
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	DKEIIAEYEAQIK	DKEIIAEYEAQIK	3	DKEIIAEYEAQIK3	3513.71	5226.48	6893.99
Q66HA4	Q66HA4	TAXB1_RAT	Tax1bp1	Tax1-binding protein 1 homolog	1	DKEINCLASFLENLSR	DKEINC(UniMod:4)LASFLENLSR	3	DKEINC(UniMod:4)LASFLENLSR3	3858.98	758	5272.84
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	DKELDDALDELSDSLGQR	DKELDDALDELSDSLGQR	3	DKELDDALDELSDSLGQR3	83579.5	77123.8	74748.4
B2GV14	B2GV14	B2GV14_RAT	Txlna	Taxilin alpha	1	DKELEGLQVK	DKELEGLQVK	2	DKELEGLQVK2	44923.9	44235.3	43011.2
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	DKELGLGR	DKELGLGR	2	DKELGLGR2	58179.1	70874.1	60454.9
A0A8I6AA52	A0A8I6AA52	A0A8I6AA52_RAT	Wdr48	WD repeat-containing protein 48	1	DKELVASAGLDR	DKELVASAGLDR	2	DKELVASAGLDR2	4422.86	2675.82	4598.96
A0A8I6AA52	A0A8I6AA52	A0A8I6AA52_RAT	Wdr48	WD repeat-containing protein 48	1	DKELVASAGLDR	DKELVASAGLDR	3	DKELVASAGLDR3	5984.68	17600.2	16495.5
O35217	O35217	MINP1_RAT	Minpp1	Multiple inositol polyphosphate phosphatase 1	1	DKEPLTAYNFEEQVHR	DKEPLTAYNFEEQVHR	3	DKEPLTAYNFEEQVHR3	19742.3	24622.5	15014.2
O35217	O35217	MINP1_RAT	Minpp1	Multiple inositol polyphosphate phosphatase 1	1	DKEPLTAYNFEEQVHR	DKEPLTAYNFEEQVHR	4	DKEPLTAYNFEEQVHR4	8306.9	10911.8	11242.8
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	DKEQELSEEDK	DKEQELSEEDK	2	DKEQELSEEDK2	16055.2	13034.1	
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	DKEQELSEEDK	DKEQELSEEDK	3	DKEQELSEEDK3	41787.8	44896.7	84510.5
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	DKEQELSEEDKQLQDELEMLVER	DKEQELSEEDKQLQDELEMLVER	4	DKEQELSEEDKQLQDELEMLVER4	21309.8	17037.8	16451.9
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	DKESDGETYIK	DKESDGETYIK	2	DKESDGETYIK2	142381	141779	121373
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	DKESDGETYIK	DKESDGETYIK	3	DKESDGETYIK3	305565	445083	366716
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	DKETGMSSLFVFNPIFGK	DKETGMSSLFVFNPIFGK	3	DKETGMSSLFVFNPIFGK3		45160.6	
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	DKETTVFYSITGPGADKPPVGVFIIER	DKETTVFYSITGPGADKPPVGVFIIER	3	DKETTVFYSITGPGADKPPVGVFIIER3	190634	224399	250028
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	DKETTVFYSITGPGADKPPVGVFIIER	DKETTVFYSITGPGADKPPVGVFIIER	4	DKETTVFYSITGPGADKPPVGVFIIER4	546416	554713	494362
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	DKEVAALTSQMDMLR	DKEVAALTSQMDMLR	2	DKEVAALTSQMDMLR2	5524.97	4691.09	4048.12
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	DKEVAALTSQMDMLR	DKEVAALTSQMDMLR	3	DKEVAALTSQMDMLR3	22289.1	29923.2	16037.6
A0A8J8Y4N8	A0A8J8Y4N8;A0A8I6AKR3	A0A8J8Y4N8_RAT	Ube2r2	Ubiquitin-conjugating enzyme E2R 2	0	DKEYAEIIR	DKEYAEIIR	2	DKEYAEIIR2	5053.82	6626.48	
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	DKFPEVIINFPDPAQK	DKFPEVIINFPDPAQK	3	DKFPEVIINFPDPAQK3	15326.5	14178.9	9258.69
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	DKFTDSAIAMNSK	DKFTDSAIAMNSK	2	DKFTDSAIAMNSK2	1646.12	1487.56	
A0A8I6ALW9	A0A8I6ALW9;A0A8I6GIW0	A0A8I6ALW9_RAT	ENSRNOG00000065952	Ig-like domain-containing protein	0	DKFTISR	DKFTISR	2	DKFTISR2	13693.2	16540.1	21194.9
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	DKGEYTLVVK	DKGEYTLVVK	2	DKGEYTLVVK2	1.19897e+06	1.33403e+06	1.41739e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	DKGEYTLVVK	DKGEYTLVVK	3	DKGEYTLVVK3	1.37094e+06	1.42324e+06	1.63289e+06
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	DKGIFLHLSNQHEFGR	DKGIFLHLSNQHEFGR	4	DKGIFLHLSNQHEFGR4	7605.66	2094.93	8707.03
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	DKGLISPEDFAQLQK	DKGLISPEDFAQLQK	3	DKGLISPEDFAQLQK3	5548.5	14563.3	6830.16
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	DKGLQTSQDAR	DKGLQTSQDAR	2	DKGLQTSQDAR2			5815.57
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	DKGLQTSQDAR	DKGLQTSQDAR	3	DKGLQTSQDAR3	11317.5		10879.2
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	DKGQDDFLGNVMLR	DKGQDDFLGNVMLR	2	DKGQDDFLGNVMLR2	5749.24	4530.32	
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	DKGQDDFLGNVMLR	DKGQDDFLGNVMLR	3	DKGQDDFLGNVMLR3	60158.4	79216.1	67077.9
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	DKGTPPQFSPVK	DKGTPPQFSPVK	2	DKGTPPQFSPVK2	13536.4	13699.9	15120.5
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	DKGTPPQFSPVK	DKGTPPQFSPVK	3	DKGTPPQFSPVK3	15086.3	21997.5	23189.2
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	DKGVKPSESITTK	DKGVKPSESITTK	3	DKGVKPSESITTK3	40001.4	69606.4	43383.8
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	DKHADPEFTK	DKHADPEFTK	2	DKHADPEFTK2		1.17037e+06	
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	DKHADPEFTK	DKHADPEFTK	3	DKHADPEFTK3	600401	886843	616004
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	DKHADPEFTKK	DKHADPEFTKK	2	DKHADPEFTKK2			589450
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	DKHADPEFTKK	DKHADPEFTKK	3	DKHADPEFTKK3			111914
P06214	P06214	HEM2_RAT	Alad	Delta-aminolevulinic acid dehydratase	1	DKHPELPLAVYQVSGEFAMLWHGAK	DKHPELPLAVYQVSGEFAMLWHGAK	4	DKHPELPLAVYQVSGEFAMLWHGAK4	6632.84	3600.91	3057.35
Q5M849	Q5M849	Q5M849_RAT	Ifi35	Interferon-induced protein 35	1	DKIPFPVPEVPVVFQGLTK	DKIPFPVPEVPVVFQGLTK	3	DKIPFPVPEVPVVFQGLTK3	29088.6	34760	28041.8
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	DKKPSLEGVEETEGSGGQAAQEAPAR	DKKPSLEGVEETEGSGGQAAQEAPAR	4	DKKPSLEGVEETEGSGGQAAQEAPAR4	9814.71	11815	10498.2
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	DKLDTVVEFPVR	DKLDTVVEFPVR	3	DKLDTVVEFPVR3		989.274	
A0A8I6GFD8	A0A8I6GFD8	A0A8I6GFD8_RAT	Sfpq	Splicing factor proline and glutamine rich	1	DKLESEMEDAYHEHQANLLR	DKLESEMEDAYHEHQANLLR	4	DKLESEMEDAYHEHQANLLR4	19279.6		
D3ZBX9	D3ZBX9	D3ZBX9_RAT	Ccdc92	Coiled-coil domain containing 92	1	DKLPETPR	DKLPETPR	2	DKLPETPR2	9166.67		8953.09
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	DKNIIELVHQVSMGMK	DKNIIELVHQVSMGMK	3	DKNIIELVHQVSMGMK3	7457.54	8612.61	8154.35
Q5I0H9	Q5I0H9	PDIA5_RAT	Pdia5	Protein disulfide-isomerase A5	1	DKNQDLCQQESVK	DKNQDLC(UniMod:4)QQESVK	3	DKNQDLC(UniMod:4)QQESVK3	9805.11	8168.49	12412.9
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	DKPANVQPYYLYGSK	DKPANVQPYYLYGSK	3	DKPANVQPYYLYGSK3	12734.2	19163.5	10709
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	DKPANVQPYYLYGSKPLNIAYSHIYSSYR	DKPANVQPYYLYGSKPLNIAYSHIYSSYR	4	DKPANVQPYYLYGSKPLNIAYSHIYSSYR4	6934.59	8492.24	8821.48
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	DKPAQIR	DKPAQIR	2	DKPAQIR2			9829.59
Q63768	Q63768	CRK_RAT	Crk	Adapter molecule crk	1	DKPEEQWWNAEDSEGK	DKPEEQWWNAEDSEGK	3	DKPEEQWWNAEDSEGK3	10412.1	3313.01	9725.6
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	DKPELQFPFLQDEDTVATLHECK	DKPELQFPFLQDEDTVATLHEC(UniMod:4)K	4	DKPELQFPFLQDEDTVATLHEC(UniMod:4)K4	29329.6	25760.9	24321.8
O35532	O35532	MSMO1_RAT	Msmo1	Methylsterol monooxygenase 1	1	DKPETFEGQWK	DKPETFEGQWK	2	DKPETFEGQWK2	8272.8	6710.16	2730.21
O35532	O35532	MSMO1_RAT	Msmo1	Methylsterol monooxygenase 1	1	DKPETFEGQWK	DKPETFEGQWK	3	DKPETFEGQWK3		15562.5	10035.9
A0A8I6G5Q1	A0A8I6G5Q1	A0A8I6G5Q1_RAT	Sema4d	Semaphorin 4D	1	DKPFDVK	DKPFDVK	2	DKPFDVK2	43873.3	40832.1	50166.7
A0A0G2JVT8	A0A8I6ARY9;A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	0	DKPHGEIVGVQVTSK	DKPHGEIVGVQVTSK	3	DKPHGEIVGVQVTSK3	11744.8	6232.82	10661.9
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	DKPHVNVGTIGHVDHGK	DKPHVNVGTIGHVDHGK	3	DKPHVNVGTIGHVDHGK3	28558.1	9800.87	5294.14
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	DKPHVNVGTIGHVDHGK	DKPHVNVGTIGHVDHGK	4	DKPHVNVGTIGHVDHGK4	36342.7	28406.3	19959
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	DKPLELWDIR	DKPLELWDIR	2	DKPLELWDIR2	11610.3		13228.9
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	DKPLELWDIR	DKPLELWDIR	3	DKPLELWDIR3	30462.9	28396.7	27456.9
P24368	P24368	PPIB_RAT	Ppib	Peptidyl-prolyl cis-trans isomerase B	1	DKPLKDVIIVDCGK	DKPLKDVIIVDC(UniMod:4)GK	2	DKPLKDVIIVDC(UniMod:4)GK2	3729.81	6203.52	7820.25
P24368	P24368	PPIB_RAT	Ppib	Peptidyl-prolyl cis-trans isomerase B	1	DKPLKDVIIVDCGK	DKPLKDVIIVDC(UniMod:4)GK	3	DKPLKDVIIVDC(UniMod:4)GK3	124775	128884	151060
P24368	P24368	PPIB_RAT	Ppib	Peptidyl-prolyl cis-trans isomerase B	1	DKPLKDVIIVDCGK	DKPLKDVIIVDC(UniMod:4)GK	4	DKPLKDVIIVDC(UniMod:4)GK4	22537.9	26748.2	27678.2
Q8R491	Q8R491	EHD3_RAT	Ehd3	EH domain-containing protein 3	1	DKPMYDEIFYTLSPVDGK	DKPMYDEIFYTLSPVDGK	3	DKPMYDEIFYTLSPVDGK3	155375	138243	133526
A0A0G2K089	A0A0G2K089	A0A0G2K089_RAT	Dennd4c	DENN domain containing 4C	1	DKPPLTDIGVLYEGK	DKPPLTDIGVLYEGK	3	DKPPLTDIGVLYEGK3	5064.22	7280.11	10682.6
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	DKPPLTDLGVLYDWK	DKPPLTDLGVLYDWK	2	DKPPLTDLGVLYDWK2	10905.2	13622.3	17209.2
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	DKPPLTDLGVLYDWK	DKPPLTDLGVLYDWK	3	DKPPLTDLGVLYDWK3	14346.5	15992.2	17578.1
F1LTT7	F1LTT7	F1LTT7_RAT	Dennd4b	DENN domain containing 4B	1	DKPPLVELGVLYDGK	DKPPLVELGVLYDGK	3	DKPPLVELGVLYDGK3	4972.98	4901.12	
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	DKPSFVR	DKPSFVR	2	DKPSFVR2	34253.6	36225.6	26177.6
D3Z841	D3Z841	D3Z841_RAT	Btnl10	Butyrophilin like 10	1	DKPSSAVHVYK	DKPSSAVHVYK	3	DKPSSAVHVYK3	13999.5	6759.39	10257.5
P33436	P33436	MMP2_RAT	Mmp2	72 kDa type IV collagenase	1	DKPTGPLLVATFWPELPEK	DKPTGPLLVATFWPELPEK	3	DKPTGPLLVATFWPELPEK3	16950	10797.7	11928.1
Q641Z6	Q641Z6	EHD1_RAT	Ehd1	EH domain-containing protein 1	1	DKPTYDEIFYTLSPVNGK	DKPTYDEIFYTLSPVNGK	3	DKPTYDEIFYTLSPVNGK3		3806.82	
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	DKPVCKPCYVK	DKPVC(UniMod:4)KPC(UniMod:4)YVK	2	DKPVC(UniMod:4)KPC(UniMod:4)YVK2	6841.26	6852.77	
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	DKPVCKPCYVK	DKPVC(UniMod:4)KPC(UniMod:4)YVK	3	DKPVC(UniMod:4)KPC(UniMod:4)YVK3	160558	134284	223907
P97689	P97689	UT1_RAT	Slc14a1	Urea transporter 1	1	DKPVVLQFMDWILR	DKPVVLQFMDWILR	3	DKPVVLQFMDWILR3		4222.41	3180.64
Q8R3Z7	Q8R3Z7	Q8R3Z7_RAT	Ehd4	EH-domain containing 4	1	DKPVYDELFYTLSPINGK	DKPVYDELFYTLSPINGK	3	DKPVYDELFYTLSPINGK3	7560.8	5370.62	8234.7
Q63060	Q63060	GLPK_RAT	Gk	Glycerol kinase	1	DKPVYYALEGSVAIAGAVIR	DKPVYYALEGSVAIAGAVIR	3	DKPVYYALEGSVAIAGAVIR3	13669.8	10049.7	14065
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	DKQEAAIPLVR	DKQEAAIPLVR	2	DKQEAAIPLVR2	4893	1998.56	5404.4
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	DKQEAAIPLVR	DKQEAAIPLVR	3	DKQEAAIPLVR3	96683.4	99651.7	129293
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	DKQPNAQPQYLHGSK	DKQPNAQPQYLHGSK	2	DKQPNAQPQYLHGSK2	2370.97	4991.99	1997.37
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	DKQPNAQPQYLHGSK	DKQPNAQPQYLHGSK	3	DKQPNAQPQYLHGSK3	32588.8	38279.2	29918
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	DKQPNAQPQYLHGSK	DKQPNAQPQYLHGSK	4	DKQPNAQPQYLHGSK4	62891.6	96946	57426.3
P36876	P36877;P97888;P36876	2ABA_RAT	Ppp2r2a	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	0	DKRPEGYNLK	DKRPEGYNLK	3	DKRPEGYNLK3	19617.7	17332.8	13669.2
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	DKTPVQSQQPSATAPSGADEK	DKTPVQSQQPSATAPSGADEK	3	DKTPVQSQQPSATAPSGADEK3	138430	136174	156470
Q9WTQ2	Q9WTQ2	PODXL_RAT	Podxl	Podocalyxin	1	DKWDDLTEAGVIDIHLGK	DKWDDLTEAGVIDIHLGK	3	DKWDDLTEAGVIDIHLGK3	7243.61		10377.8
Q9WTQ2	Q9WTQ2	PODXL_RAT	Podxl	Podocalyxin	1	DKWDDLTEAGVIDIHLGK	DKWDDLTEAGVIDIHLGK	4	DKWDDLTEAGVIDIHLGK4	9247.44	5934.95	4415.85
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	DKYVGVSSDSVGGFR	DKYVGVSSDSVGGFR	3	DKYVGVSSDSVGGFR3	19006.9	21064.3	28101.1
B0BN83	B0BN83	B0BN83_RAT	Armc1	Armadillo repeat-containing protein 1	1	DLAADPLNR	DLAADPLNR	2	DLAADPLNR2	2092	2466.77	
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DLAALEDK	DLAALEDK	1	DLAALEDK1	5161.56	6233.52	3799.72
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DLAALEDK	DLAALEDK	2	DLAALEDK2	436363	427489	371035
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DLAALEDKVK	DLAALEDKVK	2	DLAALEDKVK2	132113	138557	116062
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DLAALGDK	DLAALGDK	1	DLAALGDK1	13094.6	8559.69	5392.75
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DLAALGDK	DLAALGDK	2	DLAALGDK2	732516	781861	857312
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DLAALGDKVNSLGETAQR	DLAALGDKVNSLGETAQR	2	DLAALGDKVNSLGETAQR2	3000.62		
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DLAALGDKVNSLGETAQR	DLAALGDKVNSLGETAQR	3	DLAALGDKVNSLGETAQR3	66234.2	92833.9	98716
Q5BK57	Q5BK57	HAUS8_RAT	Haus8	HAUS augmin-like complex subunit 8	1	DLAAMCHEK	DLAAMC(UniMod:4)HEK	2	DLAAMC(UniMod:4)HEK2	11016.1	9012.9	6803.44
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	DLACFYTTK	DLAC(UniMod:4)FYTTK	2	DLAC(UniMod:4)FYTTK2	15908.8	20407.9	16921.6
P04642	P04642;A0A8I6ASS6;A0A8I6GK09	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	DLADELALVDVIEDK	DLADELALVDVIEDK	2	DLADELALVDVIEDK2	117966	102760	79581.6
P04642	P04642;A0A8I6ASS6;A0A8I6GK09	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	DLADELALVDVIEDK	DLADELALVDVIEDK	3	DLADELALVDVIEDK3	17991	10699.9	10394
P04642	P04642;A0A8I6ASS6;A0A8I6GK09	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	DLADELALVDVIEDKLK	DLADELALVDVIEDKLK	2	DLADELALVDVIEDKLK2	10404.2	8298.24	4987
P04642	P04642;A0A8I6ASS6;A0A8I6GK09	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	DLADELALVDVIEDKLK	DLADELALVDVIEDKLK	3	DLADELALVDVIEDKLK3	45211.9	47975.2	42257.1
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	DLADLPAGGSDTEPHGASSK	DLADLPAGGSDTEPHGASSK	2	DLADLPAGGSDTEPHGASSK2	5739.3		
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	DLADLPAGGSDTEPHGASSK	DLADLPAGGSDTEPHGASSK	3	DLADLPAGGSDTEPHGASSK3	28348.1	16835.6	
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	DLADWLNIK	DLADWLNIK	2	DLADWLNIK2	12143	21689.9	25432
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	DLADYASK	DLADYASK	2	DLADYASK2	55194.8	84942.4	73475
D3ZHA0	D3ZHA0;A0A0G2JXT8;A0A8I5ZV49	FLNC_RAT	Flnc	Filamin-C	0	DLAEDAPWK	DLAEDAPWK	2	DLAEDAPWK2	3.81777e+06	3.65041e+06	3.93265e+06
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	DLAEFYMR	DLAEFYMR	2	DLAEFYMR2	12696.6	12056.4	8230.86
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	DLAEIGIAVGNNDVK	DLAEIGIAVGNNDVK	2	DLAEIGIAVGNNDVK2	17008.3	10752.5	16243.2
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	DLAELINK	DLAELINK	2	DLAELINK2	83663.1	84693.1	95209.5
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	DLAEQCVK	DLAEQC(UniMod:4)VK	2	DLAEQC(UniMod:4)VK2	15835.1	20938.3	22499.6
B5DF86	B5DF86	B5DF86_RAT	Cog8	Conserved oligomeric Golgi complex subunit 8	1	DLAFANYK	DLAFANYK	2	DLAFANYK2	37468.4	27269	17513.3
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	DLAFTLEER	DLAFTLEER	2	DLAFTLEER2	45400.8	41660.6	29965.6
D3ZPP2	D3ZPP2	D3ZPP2_RAT	Arl8a	ADP-ribosylation factor like GTPase 8A	1	DLAGALDEK	DLAGALDEK	2	DLAGALDEK2	46804.2	30375.3	36742
D3ZPP2	D3ZPP2	D3ZPP2_RAT	Arl8a	ADP-ribosylation factor like GTPase 8A	1	DLAGALDEKELIEK	DLAGALDEKELIEK	3	DLAGALDEKELIEK3	81518.9	83704.7	120590
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	DLAGCIHGLSNVK	DLAGC(UniMod:4)IHGLSNVK	2	DLAGC(UniMod:4)IHGLSNVK2	17175.8	15050.7	14944
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	DLAGCIHGLSNVK	DLAGC(UniMod:4)IHGLSNVK	3	DLAGC(UniMod:4)IHGLSNVK3	334130	251133	334680
Q2YDU8	Q2YDU8	SPNS1_RAT	Spns1	Protein spinster homolog 1	1	DLAGDWHWALR	DLAGDWHWALR	3	DLAGDWHWALR3	5160.28	1956.22	9822.61
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	DLAGEVEK	DLAGEVEK	2	DLAGEVEK2	245508	252859	230719
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	DLAGLLHSGLPLVSSSSGK	DLAGLLHSGLPLVSSSSGK	3	DLAGLLHSGLPLVSSSSGK3	4432.12	3815.16	5253.71
P61980	A0A8I5ZZG4;P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	DLAGSIIGK	DLAGSIIGK	2	DLAGSIIGK2	312793	341060	261633
D3ZHZ3	D3ZHZ3	D3ZHZ3_RAT	Osbpl3	Oxysterol-binding protein	1	DLAHCHTYLLEMSQLLESMDVLHR	DLAHC(UniMod:4)HTYLLEMSQLLESMDVLHR	4	DLAHC(UniMod:4)HTYLLEMSQLLESMDVLHR4	1431.6	2119.11	6186.8
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	DLAILQLGNGIR	DLAILQLGNGIR	2	DLAILQLGNGIR2	119621	122692	78179.3
P50503	P50503	F10A1_RAT	St13	Hsc70-interacting protein	1	DLALACK	DLALAC(UniMod:4)K	1	DLALAC(UniMod:4)K1	5516.66	6967.21	3954.81
P50503	P50503	F10A1_RAT	St13	Hsc70-interacting protein	1	DLALACK	DLALAC(UniMod:4)K	2	DLALAC(UniMod:4)K2	554915	605448	595846
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	DLALATK	DLALATK	1	DLALATK1	4587.17	3536.27	4756.24
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	DLALGLVPGDR	DLALGLVPGDR	2	DLALGLVPGDR2	21353.5	22562.9	24215.8
P25030	P25030	K1C20_RAT	Krt20	Keratin, type I cytoskeletal 20	1	DLALLKK	DLALLKK	2	DLALLKK2	179426	160247	199784
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	DLALPTLLNPK	DLALPTLLNPK	2	DLALPTLLNPK2	105193	105746	115068
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	DLALSMGTIK	DLALSMGTIK	2	DLALSMGTIK2	1.52616e+06	1.69464e+06	1.63173e+06
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	DLALYLPSQDGR	DLALYLPSQDGR	2	DLALYLPSQDGR2	3525.55		7027.76
B5DFH7	B5DFH7	B5DFH7_RAT	Traf2	TNF receptor-associated factor	1	DLAMADLEQK	DLAMADLEQK	2	DLAMADLEQK2	9440.65	4626.31	6597.55
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	DLANDIMTLMSHTK	DLANDIMTLMSHTK	2	DLANDIMTLMSHTK2	2220.75	1502.79	
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	DLANDIMTLMSHTK	DLANDIMTLMSHTK	3	DLANDIMTLMSHTK3	12153.8	9591.38	6870.67
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	DLANDIMTLMSHTKPYIR	DLANDIMTLMSHTKPYIR	3	DLANDIMTLMSHTKPYIR3	27244.6	25987.4	17707.5
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	DLANDIMTLMSHTKPYIR	DLANDIMTLMSHTKPYIR	4	DLANDIMTLMSHTKPYIR4	70194.5	87872.8	62008.1
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	DLANEGR	DLANEGR	2	DLANEGR2		73284.7	
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	DLANGNITWADVEAR	DLANGNITWADVEAR	2	DLANGNITWADVEAR2	11787	11479.4	9506.38
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	DLANIAEVEVSIPAK	DLANIAEVEVSIPAK	2	DLANIAEVEVSIPAK2	5707.88	5004	7812.14
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	DLANNSSK	DLANNSSK	1	DLANNSSK1			525.059
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	DLANNSSK	DLANNSSK	2	DLANNSSK2			85120.6
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	DLANVAR	DLANVAR	1	DLANVAR1	153833	137223	141517
O70351	O70351	HCD2_RAT	Hsd17b10	3-hydroxyacyl-CoA dehydrogenase type-2	1	DLAPIGIR	DLAPIGIR	2	DLAPIGIR2	258408	257940	263665
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	DLAQCVNEVK	DLAQC(UniMod:4)VNEVK	2	DLAQC(UniMod:4)VNEVK2	23061.3	21988.1	21284.8
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	DLAQYDAAHHEEFK	DLAQYDAAHHEEFK	2	DLAQYDAAHHEEFK2	2082.95	2103.54	3360.63
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	DLAQYDAAHHEEFK	DLAQYDAAHHEEFK	3	DLAQYDAAHHEEFK3	119220	115721	135475
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	DLAQYDAAHHEEFK	DLAQYDAAHHEEFK	4	DLAQYDAAHHEEFK4	42336.4	38723.8	44318.7
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	DLAQYDAAHHEEFKR	DLAQYDAAHHEEFKR	4	DLAQYDAAHHEEFKR4	8635.31	10476.2	
A0A8I5ZQE9	A0A8I5ZQE9	A0A8I5ZQE9_RAT	Irf9	Interferon regulatory factor 9	1	DLAQYFQGQGPLPK	DLAQYFQGQGPLPK	2	DLAQYFQGQGPLPK2	4976.32	7628.59	3266.26
Q5FVC7	Q5FVC7	ACAP2_RAT	Acap2	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2	1	DLAQYSSNDAVVETSLTK	DLAQYSSNDAVVETSLTK	2	DLAQYSSNDAVVETSLTK2	2076.85	1364.37	4211.83
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	DLAQYVNEVK	DLAQYVNEVK	2	DLAQYVNEVK2	104903	117060	102410
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	DLAQYVNEVKR	DLAQYVNEVKR	2	DLAQYVNEVKR2	20749.1	15223.5	
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	DLAQYVNEVKR	DLAQYVNEVKR	3	DLAQYVNEVKR3	31690	27766.7	32735
Q66H59	Q66H59	NPL_RAT	Npl	N-acetylneuraminate lyase	1	DLASALSYQFR	DLASALSYQFR	2	DLASALSYQFR2	35154.9	25931.1	36323
A0A0G2K1D2	A0A0G2K1D2	A0A0G2K1D2_RAT	Rap1gds1	Rap1 GTPase-GDP dissociation stimulator 1	1	DLASAQLVQILHR	DLASAQLVQILHR	3	DLASAQLVQILHR3	4900.72	4188.54	5532.04
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	DLASGLIGPLLICCK	DLASGLIGPLLIC(UniMod:4)C(UniMod:4)K	2	DLASGLIGPLLIC(UniMod:4)C(UniMod:4)K2	31737.5	25355.5	27247.3
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	DLASGLIGPLLICCK	DLASGLIGPLLIC(UniMod:4)C(UniMod:4)K	3	DLASGLIGPLLIC(UniMod:4)C(UniMod:4)K3	1681.74	2797.23	
D4ABB8	D4ABB8	ATP9B_RAT	Atp9b	Probable phospholipid-transporting ATPase IIB	1	DLASMQLK	DLASMQLK	2	DLASMQLK2		17180	10517.6
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DLASVNNLLK	DLASVNNLLK	2	DLASVNNLLK2	547798	604703	588601
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DLASVNNLLKK	DLASVNNLLKK	2	DLASVNNLLKK2	9230.6	13668.9	15002.7
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DLASVNNLLKK	DLASVNNLLKK	3	DLASVNNLLKK3	65032.3	68229.4	77582.6
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DLASVQALLR	DLASVQALLR	2	DLASVQALLR2	371692	362881	351687
G3V6N7	G3V6N7	G3V6N7_RAT	Slc12a6	Solute carrier family 12, member 6	1	DLATFLYHLR	DLATFLYHLR	3	DLATFLYHLR3	7008.22	6059.61	4519.29
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	DLATIGK	DLATIGK	1	DLATIGK1	2909.69	4315.9	
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	DLAVAGPEMQVK	DLAVAGPEMQVK	2	DLAVAGPEMQVK2	317471	279266	318601
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	DLAVEDIISR	DLAVEDIISR	2	DLAVEDIISR2	403759	423056	413433
Q5XI97	Q5XI97	AASD1_RAT	Aarsd1	Alanyl-tRNA editing protein Aarsd1	1	DLAVHTAHTLR	DLAVHTAHTLR	3	DLAVHTAHTLR3	14516.6	11817	11056
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	DLAVVDAK	DLAVVDAK	1	DLAVVDAK1		1798.09	
A0A8I6GJ51	A0A8I6GJ51	A0A8I6GJ51_RAT	Ccdc85a	Coiled-coil domain containing 85A	1	DLCCFLDDDRQK	DLC(UniMod:4)C(UniMod:4)FLDDDRQK	3	DLC(UniMod:4)C(UniMod:4)FLDDDRQK3	9532.13	6525.31	11209.4
P29315	P29315	RINI_RAT	Rnh1	Ribonuclease inhibitor	1	DLCDVVASK	DLC(UniMod:4)DVVASK	2	DLC(UniMod:4)DVVASK2	63133.1	60747.3	54445.1
Q5U2N0	Q5U2N0	PYRG2_RAT	Ctps2	CTP synthase 2	1	DLCFVGEDVDGK	DLC(UniMod:4)FVGEDVDGK	2	DLC(UniMod:4)FVGEDVDGK2	13581.9	9362.94	8284.17
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	DLCGQSATQAMDQYTFELSR	DLC(UniMod:4)GQSATQAMDQYTFELSR	3	DLC(UniMod:4)GQSATQAMDQYTFELSR3	17933.6	41007.2	14931.5
O08770	O08770	GPV_RAT	Gp5	Platelet glycoprotein V	1	DLCLNQNQLSFLPANLFSSLGK	DLC(UniMod:4)LNQNQLSFLPANLFSSLGK	3	DLC(UniMod:4)LNQNQLSFLPANLFSSLGK3		53977.2	37789.2
Q63515	Q63515	C4BPB_RAT	C4bpb	C4b-binding protein beta chain	1	DLCNATENFVR	DLC(UniMod:4)NATENFVR	2	DLC(UniMod:4)NATENFVR2	22534.3	25661.7	26418.9
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	DLDCQQLQAR	DLDC(UniMod:4)QQLQAR	2	DLDC(UniMod:4)QQLQAR2	33615.3	30979.8	25199.6
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	DLDDALSCR	DLDDALSC(UniMod:4)R	2	DLDDALSC(UniMod:4)R2	63345.3	71920.7	56364.4
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	DLDDFQSWLSR	DLDDFQSWLSR	2	DLDDFQSWLSR2	116359	157335	149097
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	DLDECAEGLHDCESR	DLDEC(UniMod:4)AEGLHDC(UniMod:4)ESR	3	DLDEC(UniMod:4)AEGLHDC(UniMod:4)ESR3	4438.07	7840.19	1609.53
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	DLDECATK	DLDEC(UniMod:4)ATK	2	DLDEC(UniMod:4)ATK2	57261.6	56115.9	69419
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	DLDEDELLGK	DLDEDELLGK	2	DLDEDELLGK2	608927	606352	607053
B2RZ97	B2RZ97	B2RZ97_RAT	Kcmf1	E3 ubiquitin-protein ligase KCMF1	1	DLDESSGVR	DLDESSGVR	2	DLDESSGVR2	82863.7	80852.1	59357.5
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	DLDFANDANK	DLDFANDANK	2	DLDFANDANK2	24639.5	18795.4	21195.2
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	DLDFANDASK	DLDFANDASK	2	DLDFANDASK2	34434.3	33700.8	42294.4
Q5PPK9	Q5PPK9	EIPR1_RAT	Eipr1	EARP and GARP complex-interacting protein 1	1	DLDFNPNK	DLDFNPNK	2	DLDFNPNK2	63116.2	64741.5	55469.4
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	DLDIAGFTQK	DLDIAGFTQK	2	DLDIAGFTQK2	19687.5	12799.6	20677.8
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	DLDIFDR	DLDIFDR	2	DLDIFDR2	377882	379990	377357
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	DLDIIDNYDYSHTVK	DLDIIDNYDYSHTVK	3	DLDIIDNYDYSHTVK3	6008.45	3080.36	4775.86
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	DLDKDDFLGR	DLDKDDFLGR	3	DLDKDDFLGR3	17942.7	25109.7	19067.6
P58751	P58751	RELN_RAT	Reln	Reelin	1	DLDLSHAR	DLDLSHAR	2	DLDLSHAR2	120099	105473	117867
P60570	P60570	PANX1_RAT	Panx1	Pannexin-1	1	DLDLSSETAANNGEK	DLDLSSETAANNGEK	2	DLDLSSETAANNGEK2	10891	9994.12	11797.4
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	DLDMLIK	DLDMLIK	1	DLDMLIK1	9653.53	7735.23	
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	DLDMLIK	DLDMLIK	2	DLDMLIK2	144085	155925	145470
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	DLDNAEEK	DLDNAEEK	2	DLDNAEEK2		137060	
P49651	P49651	P2RY1_RAT	P2ry1	P2Y purinoceptor 1	1	DLDNSPLR	DLDNSPLR	2	DLDNSPLR2	17771.5	14717.1	25589.6
P51146	P51146	RAB4B_RAT	Rab4b	Ras-related protein Rab-4B	1	DLDPEREVTFLEASR	DLDPEREVTFLEASR	3	DLDPEREVTFLEASR3	27949.1	33310	30251.2
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	DLDPEVFQR	DLDPEVFQR	2	DLDPEVFQR2	62876.9	58710.9	61946.5
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	DLDPGRK	DLDPGRK	2	DLDPGRK2	121478		96579
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	DLDQASLAAVSQQLAPR	DLDQASLAAVSQQLAPR	2	DLDQASLAAVSQQLAPR2	1.17992e+06	1.02284e+06	1.04629e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	DLDQASLAAVSQQLAPR	DLDQASLAAVSQQLAPR	3	DLDQASLAAVSQQLAPR3	808212	637752	810574
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	DLDQDGDK	DLDQDGDK	1	DLDQDGDK1	8311.02		5305.37
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	DLDQDGDK	DLDQDGDK	2	DLDQDGDK2	74893.9		92693.2
F7ERH6	F7ERH6	F7ERH6_RAT	Atf6b	Activating transcription factor 6 beta	1	DLDQLFLSSDCR	DLDQLFLSSDC(UniMod:4)R	2	DLDQLFLSSDC(UniMod:4)R2	3370.42	6505.3	4822.66
O08770	O08770	GPV_RAT	Gp5	Platelet glycoprotein V	1	DLDQNLFQK	DLDQNLFQK	2	DLDQNLFQK2	2.04031e+06	1.98287e+06	2.13399e+06
G3V7L4	G3V7L4	G3V7L4_RAT	Cdh16	Cadherin 16	1	DLDQPADSVPLK	DLDQPADSVPLK	2	DLDQPADSVPLK2	44394.1	52422.9	46772.3
D3ZXY2	D3ZXY2	D3ZXY2_RAT	Pdzd8	PDZ domain containing 8	1	DLDSEFEDLAGDVR	DLDSEFEDLAGDVR	2	DLDSEFEDLAGDVR2	3265.63	5238.22	3957.45
Q5M853	Q5M853	KXDL1_RAT	Kxd1	KxDL motif-containing protein 1	1	DLDSIFR	DLDSIFR	2	DLDSIFR2	10352.3	13746.4	11490
D3ZZC1	D3ZZC1	D3ZZC1_RAT	Txndc5	protein disulfide-isomerase	1	DLDSLHSFVLR	DLDSLHSFVLR	2	DLDSLHSFVLR2	10460.6	9589.88	
D3ZZC1	D3ZZC1	D3ZZC1_RAT	Txndc5	protein disulfide-isomerase	1	DLDSLHSFVLR	DLDSLHSFVLR	3	DLDSLHSFVLR3	91750.3	73634.1	87223.5
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	DLDTGEEVTR	DLDTGEEVTR	2	DLDTGEEVTR2	7140.54	919.563	3839.54
O88989	O88989	MDHC_RAT	Mdh1	Malate dehydrogenase, cytoplasmic	1	DLDVAVLVGSMPR	DLDVAVLVGSMPR	2	DLDVAVLVGSMPR2	16177	9178.26	4409.69
O88989	O88989	MDHC_RAT	Mdh1	Malate dehydrogenase, cytoplasmic	1	DLDVAVLVGSMPR	DLDVAVLVGSMPR	3	DLDVAVLVGSMPR3	6184.62	3048.73	1599.91
Q9WV63	Q9WV63;A0A8I6A456	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	0	DLDVITIPSK	DLDVITIPSK	2	DLDVITIPSK2	717531	676727	746079
Q9WV63	Q9WV63;A0A8I6A456	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	0	DLDVITIPSKDVVMVHEPK	DLDVITIPSKDVVMVHEPK	3	DLDVITIPSKDVVMVHEPK3	105832	131969	123470
Q9WV63	Q9WV63;A0A8I6A456	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	0	DLDVITIPSKDVVMVHEPK	DLDVITIPSKDVVMVHEPK	4	DLDVITIPSKDVVMVHEPK4	153150	204551	195265
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	DLDVVVVSVAGAFR	DLDVVVVSVAGAFR	2	DLDVVVVSVAGAFR2	16919.9	15324.3	14979.7
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	DLDVVVVSVAGAFR	DLDVVVVSVAGAFR	3	DLDVVVVSVAGAFR3	3029.99	4192.19	4047.11
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	DLDVVVVSVAGAFRK	DLDVVVVSVAGAFRK	3	DLDVVVVSVAGAFRK3	4718.29		2388.42
O08775	O08775	VGFR2_RAT	Kdr	Vascular endothelial growth factor receptor 2	1	DLDWLWPNTPR	DLDWLWPNTPR	2	DLDWLWPNTPR2	46696.2	40877.8	44909.9
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	DLDYTHLEEK	DLDYTHLEEK	3	DLDYTHLEEK3	5184.41	6792.48	9192.65
P52303	P52303	AP1B1_RAT	Ap1b1	AP-1 complex subunit beta-1	1	DLDYYATLLK	DLDYYATLLK	2	DLDYYATLLK2	11452.5		7770.66
P52303	P52303	AP1B1_RAT	Ap1b1	AP-1 complex subunit beta-1	1	DLDYYATLLKK	DLDYYATLLKK	3	DLDYYATLLKK3	2710.04	4559.14	3683.56
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	DLEAGNIVYVHR	DLEAGNIVYVHR	2	DLEAGNIVYVHR2	18562.2	13529.8	20541.4
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	DLEAGNIVYVHR	DLEAGNIVYVHR	3	DLEAGNIVYVHR3	107942	149747	127566
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DLEAHIDTANK	DLEAHIDTANK	2	DLEAHIDTANK2	1.15165e+06	1.46781e+06	1.21186e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DLEAHIDTANK	DLEAHIDTANK	3	DLEAHIDTANK3	261687	304293	253918
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	DLEAITFK	DLEAITFK	1	DLEAITFK1	1480.27	1677.8	4425.82
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	DLEAITFK	DLEAITFK	2	DLEAITFK2	261991	238515	221891
Q5FVQ9	Q5FVQ9	TBCE_RAT	Tbce	Tubulin-specific chaperone E	1	DLEALDLSENK	DLEALDLSENK	2	DLEALDLSENK2	8613.53	5618.36	3203.86
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	DLEALLNSK	DLEALLNSK	2	DLEALLNSK2	20284.7	13044.8	22442.6
P38652	P38652	PGM1_RAT	Pgm1	Phosphoglucomutase-1	1	DLEALMLDR	DLEALMLDR	2	DLEALMLDR2	5239.7	6730.47	6564.67
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	DLEAPEVQESYR	DLEAPEVQESYR	2	DLEAPEVQESYR2	130635	129587	143364
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	DLEAPEVQESYR	DLEAPEVQESYR	3	DLEAPEVQESYR3	3043.02		4219.27
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	DLEASIAR	DLEASIAR	2	DLEASIAR2	372545	475737	391000
A0A8I6A193	A0A8I6A193	A0A8I6A193_RAT	Ccdc167	Coiled-coil domain-containing protein 167	1	DLEAVTSQLHR	DLEAVTSQLHR	2	DLEAVTSQLHR2	6519.81	16638.9	13574.4
A0A8I6A193	A0A8I6A193	A0A8I6A193_RAT	Ccdc167	Coiled-coil domain-containing protein 167	1	DLEAVTSQLHR	DLEAVTSQLHR	3	DLEAVTSQLHR3	24790.3	24577.6	24093.9
Q9JLS3	Q9JLS3	TAOK2_RAT	Taok2	Serine/threonine-protein kinase TAO2	1	DLECALLLR	DLEC(UniMod:4)ALLLR	2	DLEC(UniMod:4)ALLLR2	10243.3	10393.8	9021.99
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	DLEDESTPIVK	DLEDESTPIVK	2	DLEDESTPIVK2	12183.2	15631.3	11839.7
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	DLEDETLWVEER	DLEDETLWVEER	2	DLEDETLWVEER2	27541.2	29223.9	30406.6
Q62871	Q62871	DC1I2_RAT	Dync1i2	Cytoplasmic dynein 1 intermediate chain 2	1	DLEDKEGEIQAGAK	DLEDKEGEIQAGAK	2	DLEDKEGEIQAGAK2	3847.66	2198.53	10962.6
Q62871	Q62871	DC1I2_RAT	Dync1i2	Cytoplasmic dynein 1 intermediate chain 2	1	DLEDKEGEIQAGAK	DLEDKEGEIQAGAK	3	DLEDKEGEIQAGAK3	126515	131835	152271
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	DLEDLQILIK	DLEDLQILIK	2	DLEDLQILIK2	43138.1	49753.4	45276.2
Q6PEC1	F1M825;Q7TPI6;Q6PEC1	TBCA_RAT	Tbca	Tubulin-specific chaperone A	0	DLEEAEEYK	DLEEAEEYK	2	DLEEAEEYK2	7692.71	8035.78	10706.2
Q6PEC1	Q6PEC1	TBCA_RAT	Tbca	Tubulin-specific chaperone A	1	DLEEAEEYKEAR	DLEEAEEYKEAR	2	DLEEAEEYKEAR2	3662.13	1535.25	5346.71
Q6PEC1	Q6PEC1	TBCA_RAT	Tbca	Tubulin-specific chaperone A	1	DLEEAEEYKEAR	DLEEAEEYKEAR	3	DLEEAEEYKEAR3	40989.4	37461.9	44423.2
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	DLEEALEAGGCDLETLR	DLEEALEAGGC(UniMod:4)DLETLR	2	DLEEALEAGGC(UniMod:4)DLETLR2	29804.1	16245.6	21751.2
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	DLEEALEAGGCDLETLR	DLEEALEAGGC(UniMod:4)DLETLR	3	DLEEALEAGGC(UniMod:4)DLETLR3	23372.8	22013.7	21034.5
Q29RW1	P02563;P02564;Q29RW1	MYH4_RAT	Myh4	Myosin-4	0	DLEEATLQHEATAAALR	DLEEATLQHEATAAALR	3	DLEEATLQHEATAAALR3	464.156	3294.96	1397.9
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	DLEEDHACIPIK	DLEEDHAC(UniMod:4)IPIK	3	DLEEDHAC(UniMod:4)IPIK3	31552.2	37684.5	25460
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	DLEEDHACIPIKK	DLEEDHAC(UniMod:4)IPIKK	3	DLEEDHAC(UniMod:4)IPIKK3	72591.6	61462	55879
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	DLEEDHACIPIKK	DLEEDHAC(UniMod:4)IPIKK	4	DLEEDHAC(UniMod:4)IPIKK4	37847.7	47578.3	29240.9
Q811U3	Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	1	DLEEEIQMLK	DLEEEIQMLK	2	DLEEEIQMLK2	4383.17	4294.83	4583.56
Q66H15	Q66H15	RMD3_RAT	Rmdn3	Regulator of microtubule dynamics protein 3	1	DLEELEVILGK	DLEELEVILGK	2	DLEELEVILGK2	23322.7	24769.9	16343
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	DLEELGANPCLTNSK	DLEELGANPC(UniMod:4)LTNSK	2	DLEELGANPC(UniMod:4)LTNSK2	22537.3	23540	17071
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	DLEELGANPCLTNSK	DLEELGANPC(UniMod:4)LTNSK	3	DLEELGANPC(UniMod:4)LTNSK3		1675.72	
A0A8I6APP3	A0A8I6APP3	A0A8I6APP3_RAT	Plekho2	Pleckstrin homology domain containing O2	1	DLEELNQESPGLVQK	DLEELNQESPGLVQK	2	DLEELNQESPGLVQK2	121485	127219	115916
A0A8I6APP3	A0A8I6APP3	A0A8I6APP3_RAT	Plekho2	Pleckstrin homology domain containing O2	1	DLEELNQESPGLVQK	DLEELNQESPGLVQK	3	DLEELNQESPGLVQK3	75642.3	68080.7	71112.6
Q9ER24	Q9ER24	ATX10_RAT	Atxn10	Ataxin-10	1	DLEENLNIAINVIEAHQK	DLEENLNIAINVIEAHQK	3	DLEENLNIAINVIEAHQK3	382.276		
Q63621	Q63621	IL1AP_RAT	Il1rap	Interleukin-1 receptor accessory protein	1	DLEEPINFR	DLEEPINFR	2	DLEEPINFR2	9079.05	7430	8504.33
P86182	P86182	CCD22_RAT	Ccdc22	Coiled-coil domain-containing protein 22	1	DLEEQIETEMGK	DLEEQIETEMGK	2	DLEEQIETEMGK2		4099.56	9465
O35757	O35757	VEGFC_RAT	Vegfc	Vascular endothelial growth factor C	1	DLEEQLR	DLEEQLR	2	DLEEQLR2	10856.8	12861.9	14214
D3ZWA8	D3ZWA8	D3ZWA8_RAT	Appl1	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1	1	DLEEQSR	DLEEQSR	2	DLEEQSR2	30589.6	17518.4	14382.4
D4A7V9	D4A7V9	E2AK4_RAT	Eif2ak4	eIF-2-alpha kinase GCN2	1	DLEEVVGLLK	DLEEVVGLLK	2	DLEEVVGLLK2	3686.09	2484.76	
P08082	P08082	CLCB_RAT	Cltb	Clathrin light chain B	1	DLEEWNQR	DLEEWNQR	2	DLEEWNQR2	50890.4	61627.4	70973.1
D4AE80	D4AE80	D4AE80_RAT	Dcp1a	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	DLEFQLHEPFLLYR	DLEFQLHEPFLLYR	3	DLEFQLHEPFLLYR3	1800.92	5552.71	
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	DLEFTIYDDDDVSPFLDGLEERPQR	DLEFTIYDDDDVSPFLDGLEERPQR	4	DLEFTIYDDDDVSPFLDGLEERPQR4	32352.5	19492.1	14877.8
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	DLEFTIYDDDDVSPFLDGLEERPQRK	DLEFTIYDDDDVSPFLDGLEERPQRK	4	DLEFTIYDDDDVSPFLDGLEERPQRK4	493618	493120	405290
D3ZZL9	D3ZZL9	GCC2_RAT	Gcc2	GRIP and coiled-coil domain-containing protein 2	1	DLEGAVHR	DLEGAVHR	2	DLEGAVHR2	4419.08	4691.5	
Q7TP47	Q7TP47	HNRPQ_RAT	Syncrip	Heterogeneous nuclear ribonucleoprotein Q	1	DLEGENIEIVFAKPPDQK	DLEGENIEIVFAKPPDQK	3	DLEGENIEIVFAKPPDQK3		8397.33	10087.3
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	DLEGLHR	DLEGLHR	2	DLEGLHR2	471199	437966	500938
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DLEGLSQR	DLEGLSQR	1	DLEGLSQR1	201648	275507	273197
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DLEGLSQR	DLEGLSQR	2	DLEGLSQR2	1.88611e+07	2.18818e+07	2.1271e+07
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DLEGLSQRLEEK	DLEGLSQRLEEK	3	DLEGLSQRLEEK3	28472	17838.2	22774.6
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	DLEGSDIDTR	DLEGSDIDTR	2	DLEGSDIDTR2	24421.8	20039	15461.2
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	DLEGTIR	DLEGTIR	2	DLEGTIR2	37610.4	63790.2	40974.5
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	DLEGVKPAVLTR	DLEGVKPAVLTR	3	DLEGVKPAVLTR3	45613.5	37225	44850.6
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	DLEHLSK	DLEHLSK	1	DLEHLSK1	11954.1	13751.7	9543.19
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	DLEHLSK	DLEHLSK	2	DLEHLSK2	87207	75604.8	86209.3
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	DLEIGEYK	DLEIGEYK	1	DLEIGEYK1	14648.6	13743.9	23867.4
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	DLEIGEYK	DLEIGEYK	2	DLEIGEYK2	1.08046e+06	1.14425e+06	1.12594e+06
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	DLEITESEAK	DLEITESEAK	2	DLEITESEAK2	36616.3	33962.7	41085.7
Q08420	Q08420	SODE_RAT	Sod3	Extracellular superoxide dismutase [Cu-Zn]	1	DLEIWMELGK	DLEIWMELGK	2	DLEIWMELGK2	37465.1	30756.8	23989.7
Q9Z1N3	Q9Z1N3	MYO9A_RAT	Myo9a	Unconventional myosin-IXa	1	DLEKDTK	DLEKDTK	2	DLEKDTK2			12575.9
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	DLEKPFLLPVESVYSIPGR	DLEKPFLLPVESVYSIPGR	3	DLEKPFLLPVESVYSIPGR3	83737.7	86590.5	107753
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	DLEKPGEREDLVSAGQR	DLEKPGEREDLVSAGQR	2	DLEKPGEREDLVSAGQR2		984.388	975.69
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	DLEKPGEREDLVSAGQR	DLEKPGEREDLVSAGQR	3	DLEKPGEREDLVSAGQR3	94960.2	77117.9	69785.9
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	DLEKPGEREDLVSAGQR	DLEKPGEREDLVSAGQR	4	DLEKPGEREDLVSAGQR4	377303	446626	436645
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	DLELAVPGTYDPNQPIIR	DLELAVPGTYDPNQPIIR	3	DLELAVPGTYDPNQPIIR3	9401.35	5348.36	12214.2
Q6R6I6	Q6R6I6	RXFP1_RAT	Rxfp1	Relaxin receptor 1	1	DLELDCDEANLR	DLELDC(UniMod:4)DEANLR	2	DLELDC(UniMod:4)DEANLR2	5252.17		
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	DLELLIQTATR	DLELLIQTATR	2	DLELLIQTATR2	98548.9	100331	77495.5
A0A0G2JZA7	A0A0G2JZA7	A0A0G2JZA7_RAT	Cemip2	hyaluronoglucosaminidase	1	DLELLQQALK	DLELLQQALK	2	DLELLQQALK2	5582.81	3376.78	6542.81
A0A8J8YGQ6	A0A8J8YGQ6	A0A8J8YGQ6_RAT	Dhrsx	Dehydrogenase/reductase X-linked	1	DLELQGHLWAESCR	DLELQGHLWAESC(UniMod:4)R	3	DLELQGHLWAESC(UniMod:4)R3	1535.55	1406.92	2641.69
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	DLELSEGGALSPSR	DLELSEGGALSPSR	2	DLELSEGGALSPSR2	10900.8	6884.78	3912.98
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	DLEMVNISLAR	DLEMVNISLAR	2	DLEMVNISLAR2	7886.39	8191.77	3384.86
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	DLENFVK	DLENFVK	2	DLENFVK2	115842	119418	117868
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	DLENLAGPVSLSTPAQLVAPSVVVK	DLENLAGPVSLSTPAQLVAPSVVVK	3	DLENLAGPVSLSTPAQLVAPSVVVK3	5661.44	5829.19	6082.68
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	DLENVKQK	DLENVKQK	2	DLENVKQK2	18946.5	18781.5	14529.3
D3ZLD7	D3ZLD7	D3ZLD7_RAT	Ppp2r3a	Protein phosphatase 2, regulatory subunit B'', alpha	1	DLEPKPIVSSATEK	DLEPKPIVSSATEK	3	DLEPKPIVSSATEK3	5475.15	1578	
Q3B8N7	Q3B8N7	T22D4_RAT	Tsc22d4	TSC22 domain family protein 4	1	DLEPPSFGR	DLEPPSFGR	2	DLEPPSFGR2	205726	152775	171126
Q2M2S1	Q2M2S1	Q2M2S1_RAT	Tor1b	Torsin	1	DLEPVLSVGVFNNK	DLEPVLSVGVFNNK	2	DLEPVLSVGVFNNK2	8350.15	11711.7	11156.5
A0A8I6A5H5	A0A8I6A5H5	A0A8I6A5H5_RAT	Rela	RELA proto-oncogene, NF-kB subunit	1	DLEQAISQR	DLEQAISQR	2	DLEQAISQR2	8943.3	8394.44	8135.67
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	DLESPSQAAGIHLEIIHSEASANLK	DLESPSQAAGIHLEIIHSEASANLK	3	DLESPSQAAGIHLEIIHSEASANLK3	25120	22167.9	22779.9
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	DLESPSQAAGIHLEIIHSEASANLK	DLESPSQAAGIHLEIIHSEASANLK	4	DLESPSQAAGIHLEIIHSEASANLK4	62593.2	61750.1	65247.5
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	DLESPSQAAGIHLEIIHSEASANLKK	DLESPSQAAGIHLEIIHSEASANLKK	4	DLESPSQAAGIHLEIIHSEASANLKK4	10928.5	13933.4	14500.3
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	DLETQVIQLNEQVHSLK	DLETQVIQLNEQVHSLK	3	DLETQVIQLNEQVHSLK3	91140.1	62862.1	92331.2
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	DLETSCSDIR	DLETSC(UniMod:4)SDIR	2	DLETSC(UniMod:4)SDIR2	112050	113670	126586
B2RYK9	B2RYK9	B2RYK9_RAT	Dmkn	Dermokine	1	DLETSNFDDGYSVSR	DLETSNFDDGYSVSR	2	DLETSNFDDGYSVSR2	3803.37	5573.02	4844.46
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	DLEVALTHK	DLEVALTHK	2	DLEVALTHK2	7088.36	6833.47	4346.69
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	DLEVIASTPTSLLISWEPPAVSVR	DLEVIASTPTSLLISWEPPAVSVR	3	DLEVIASTPTSLLISWEPPAVSVR3	223390	329428	238061
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	DLEVIASTPTSLLISWEPPAVSVR	DLEVIASTPTSLLISWEPPAVSVR	4	DLEVIASTPTSLLISWEPPAVSVR4	23559.2	43825.6	45978.8
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	DLEVPGYR	DLEVPGYR	2	DLEVPGYR2	75038.6	70916	79079.3
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	DLEVVEGSAAR	DLEVVEGSAAR	2	DLEVVEGSAAR2	590103	689855	602402
F1LN92	F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	1	DLFALAR	DLFALAR	2	DLFALAR2	30738	34782.5	36597.7
Q5M824	Q5M824;O70143	SHC1_RAT	Shc1	SHC-transforming protein 1	0	DLFDMKPFEDALR	DLFDMKPFEDALR	3	DLFDMKPFEDALR3	17097.5	7515.58	17425.7
P07335	P07335	KCRB_RAT	Ckb	Creatine kinase B-type	1	DLFDPIIEDR	DLFDPIIEDR	2	DLFDPIIEDR2	153327	133098	123758
D3ZAI6	D3ZAI6	D3ZAI6_RAT	Nt5dc3	5'-nucleotidase domain containing 3	1	DLFDVVIVQAEKPNFFNDK	DLFDVVIVQAEKPNFFNDK	3	DLFDVVIVQAEKPNFFNDK3	10749.2	7322.68	
Q7TP47	Q7TP47	HNRPQ_RAT	Syncrip	Heterogeneous nuclear ribonucleoprotein Q	1	DLFEDELVPLFEK	DLFEDELVPLFEK	2	DLFEDELVPLFEK2	8523.76	10482.4	12711.5
Q9ESM0	Q9ESM0	IP6K1_RAT	Ip6k1	Inositol hexakisphosphate kinase 1	1	DLFEPILSK	DLFEPILSK	2	DLFEPILSK2	14045.3	6360.57	3147.81
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	DLFGGLPK	DLFGGLPK	2	DLFGGLPK2	25165.6	18210.4	24265
B4F779	B4F779	DP13B_RAT	Appl2	DCC-interacting protein 13-beta	1	DLFGLASNEHDLSMAK	DLFGLASNEHDLSMAK	3	DLFGLASNEHDLSMAK3	15780.5	6197.02	9111.64
Q03626	A0A8I6AG69;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	DLFHCLSFTIPR	DLFHC(UniMod:4)LSFTIPR	2	DLFHC(UniMod:4)LSFTIPR2	48885.1	59588.7	48980
Q03626	A0A8I6AG69;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	DLFHCLSFTIPR	DLFHC(UniMod:4)LSFTIPR	3	DLFHC(UniMod:4)LSFTIPR3	105420	60070.6	63029
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	DLFHCVSFTIPR	DLFHC(UniMod:4)VSFTIPR	2	DLFHC(UniMod:4)VSFTIPR2	13746.4	18431	1.7934e+06
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	DLFHCVSFTIPR	DLFHC(UniMod:4)VSFTIPR	3	DLFHC(UniMod:4)VSFTIPR3	49738.5	40541.7	34104.2
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	DLFIATYQAFPPMPNPPRPPTR	DLFIATYQAFPPMPNPPRPPTR	3	DLFIATYQAFPPMPNPPRPPTR3	84192.4	74625.8	88927
Q63372	Q63372	NRX1A_RAT	Nrxn1	Neurexin-1	1	DLFIDGQSK	DLFIDGQSK	2	DLFIDGQSK2	13196.3	10706.3	18615.2
D3ZEF9	D3ZEF9	D3ZEF9_RAT	B3gnt2	Hexosyltransferase	1	DLFIGDVIHNAGPHR	DLFIGDVIHNAGPHR	2	DLFIGDVIHNAGPHR2	4191.4	2431.51	
D3ZEF9	D3ZEF9	D3ZEF9_RAT	B3gnt2	Hexosyltransferase	1	DLFIGDVIHNAGPHR	DLFIGDVIHNAGPHR	3	DLFIGDVIHNAGPHR3	65923.1	60287.6	62857.3
D3ZEF9	D3ZEF9	D3ZEF9_RAT	B3gnt2	Hexosyltransferase	1	DLFIGDVIHNAGPHR	DLFIGDVIHNAGPHR	4	DLFIGDVIHNAGPHR4	38654.2	31953.2	29382.8
F7EWF8	F7EWF8	F7EWF8_RAT	Anapc2	Anaphase-promoting complex subunit 2	1	DLFINEYR	DLFINEYR	2	DLFINEYR2	24491.3	16194.8	11957.1
P97711	P97711	GRK6_RAT	Grk6	G protein-coupled receptor kinase 6	1	DLFQELTR	DLFQELTR	2	DLFQELTR2	15709.7	12778.2	15479
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	DLFQVAFNR	DLFQVAFNR	2	DLFQVAFNR2	133740	166082	170169
O88797	O88797	DAB2_RAT	Dab2	Disabled homolog 2	1	DLFQVIYNVK	DLFQVIYNVK	2	DLFQVIYNVK2	2705.67	5213.37	
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	DLFSDGHSEFLK	DLFSDGHSEFLK	2	DLFSDGHSEFLK2	152852	98465.6	109989
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	DLFSDGHSEFLK	DLFSDGHSEFLK	3	DLFSDGHSEFLK3	394991	358067	394829
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	DLFTCTIK	DLFTC(UniMod:4)TIK	2	DLFTC(UniMod:4)TIK2	451744	585262	498589
A0A8J8Y8E0	A0A8J8Y8E0	A0A8J8Y8E0_RAT	Fibp	FGF1 intracellular binding protein	1	DLFVDLVEK	DLFVDLVEK	2	DLFVDLVEK2	16905.2	14737	9531.3
Q642B0	Q642B0	Q642B0_RAT	Gpc4	Glypican 4	1	DLFVELKR	DLFVELKR	2	DLFVELKR2	3021.92	6451.56	
A0A0G2JUF2	A0A0G2JUF2	A0A0G2JUF2_RAT	Snx30	Sorting nexin family member 30	1	DLFVTVDDPKK	DLFVTVDDPKK	3	DLFVTVDDPKK3	6649.76	2520.17	
Q5XIE1	Q5XIE1	THEM6_RAT	Them6	Protein THEM6	1	DLGAHTVLAASCAR	DLGAHTVLAASC(UniMod:4)AR	2	DLGAHTVLAASC(UniMod:4)AR2	2116.16	1838.81	
Q5XIE1	Q5XIE1	THEM6_RAT	Them6	Protein THEM6	1	DLGAHTVLAASCAR	DLGAHTVLAASC(UniMod:4)AR	3	DLGAHTVLAASC(UniMod:4)AR3	23293.1	26705.7	30135.6
Q0PMD2	Q0PMD2	ANTR1_RAT	Antxr1	Anthrax toxin receptor 1	1	DLGAIVYCVGVK	DLGAIVYC(UniMod:4)VGVK	2	DLGAIVYC(UniMod:4)VGVK2	56291.8	41581.1	49637.9
A0A0G2K528	A0A0G2K528	A0A0G2K528_RAT	Stx16	Syntaxin 16	1	DLGAMIVEQGTVLDR	DLGAMIVEQGTVLDR	2	DLGAMIVEQGTVLDR2	9999.55	8341.56	13572.7
P48500	A0A0G2JWU1;A0A8I5ZVI4;P48500	TPIS_RAT	Tpi1	Triosephosphate isomerase	0	DLGATWVVLGHSER	DLGATWVVLGHSER	2	DLGATWVVLGHSER2	16118.7	6931.17	8224.27
P48500	A0A0G2JWU1;A0A8I5ZVI4;P48500	TPIS_RAT	Tpi1	Triosephosphate isomerase	0	DLGATWVVLGHSER	DLGATWVVLGHSER	3	DLGATWVVLGHSER3	127830	131662	158089
Q9ET64	Q9ET64	NSMA_RAT	Smpd2	Sphingomyelin phosphodiesterase 2	1	DLGCCLLK	DLGC(UniMod:4)C(UniMod:4)LLK	2	DLGC(UniMod:4)C(UniMod:4)LLK2	50927.1	49884.5	47063.6
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	DLGDVMEMVFSAQACK	DLGDVMEMVFSAQAC(UniMod:4)K	2	DLGDVMEMVFSAQAC(UniMod:4)K2	3840.13	4396.33	5093.65
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	DLGDVMEMVFSAQACK	DLGDVMEMVFSAQAC(UniMod:4)K	3	DLGDVMEMVFSAQAC(UniMod:4)K3	2106.27	1626.43	1210.35
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	DLGDYKDLDEDELLGK	DLGDYKDLDEDELLGK	3	DLGDYKDLDEDELLGK3	24738.2	22747.3	39970.1
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DLGEELEALK	DLGEELEALK	2	DLGEELEALK2	4.04322e+06	4.09556e+06	4.43658e+06
D3ZD03	A0A8I6AM23;D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	0	DLGEGHFGK	DLGEGHFGK	2	DLGEGHFGK2	10588.7		3614.04
B2GV52	B2GV52	BL1S5_RAT	Bloc1s5	Biogenesis of lysosome-related organelles complex 1 subunit 5	1	DLGEIHSR	DLGEIHSR	2	DLGEIHSR2	17081.3	11248.4	16524.7
P86182	P86182	CCD22_RAT	Ccdc22	Coiled-coil domain-containing protein 22	1	DLGEMLQAWGAK	DLGEMLQAWGAK	2	DLGEMLQAWGAK2	16462	8977.77	7557.13
P02770	P02770	ALBU_RAT	Alb	Albumin	1	DLGEQHFK	DLGEQHFK	1	DLGEQHFK1	54221.9	39414.3	50481.2
P02770	P02770	ALBU_RAT	Alb	Albumin	1	DLGEQHFK	DLGEQHFK	2	DLGEQHFK2	376452	352237	397416
P02770	P02770	ALBU_RAT	Alb	Albumin	1	DLGEQHFKGLVLIAFSQYLQK	DLGEQHFKGLVLIAFSQYLQK	3	DLGEQHFKGLVLIAFSQYLQK3	4420.87		
P02770	P02770	ALBU_RAT	Alb	Albumin	1	DLGEQHFKGLVLIAFSQYLQK	DLGEQHFKGLVLIAFSQYLQK	4	DLGEQHFKGLVLIAFSQYLQK4	17991.4	12099.1	8815.83
P02770	P02770	ALBU_RAT	Alb	Albumin	1	DLGEQHFKGLVLIAFSQYLQKCPYEEHIK	DLGEQHFKGLVLIAFSQYLQKC(UniMod:4)PYEEHIK	4	DLGEQHFKGLVLIAFSQYLQKC(UniMod:4)PYEEHIK4	2362.52	10381.2	7841.99
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	DLGFFGIYK	DLGFFGIYK	2	DLGFFGIYK2	92119.6	85600.2	95608.2
Q5XID7	Q5XID7	ARMX3_RAT	Armcx3	Armadillo repeat-containing X-linked protein 3	1	DLGGLPIVAK	DLGGLPIVAK	2	DLGGLPIVAK2	7760.41	5486.47	4970.44
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	DLGGSGEGGAR	DLGGSGEGGAR	2	DLGGSGEGGAR2	270885	306044	329575
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	DLGGSSSGAEVR	DLGGSSSGAEVR	2	DLGGSSSGAEVR2	4982.08	12874.7	10797.1
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	DLGHTVQMEGYLGR	DLGHTVQMEGYLGR	2	DLGHTVQMEGYLGR2	3178.79	8145.71	3380.4
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	DLGHTVQMEGYLGR	DLGHTVQMEGYLGR	3	DLGHTVQMEGYLGR3	55290	58711.7	42000.3
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	DLGIFWLNAAETWVDISSNTAGK	DLGIFWLNAAETWVDISSNTAGK	3	DLGIFWLNAAETWVDISSNTAGK3		12299.3	11698.4
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	DLGIVVEGFMK	DLGIVVEGFMK	2	DLGIVVEGFMK2	109339	110553	121619
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	DLGLAFEIPAHIK	DLGLAFEIPAHIK	2	DLGLAFEIPAHIK2	3224.69	1809.56	3371.88
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	DLGLAFEIPAHIK	DLGLAFEIPAHIK	3	DLGLAFEIPAHIK3	16950.9	16919.9	20119.2
P29266	P29266	3HIDH_RAT	Hibadh	3-hydroxyisobutyrate dehydrogenase, mitochondrial	1	DLGLAQDSATSTK	DLGLAQDSATSTK	2	DLGLAQDSATSTK2	67779.9	55492.3	72705.1
M0R4V1	F1LN21;M0R4V1;M0RC78	M0R4V1_RAT	Pcdhb7	Protocadherin beta 7	0	DLGLGAGELAAR	DLGLGAGELAAR	2	DLGLGAGELAAR2	12876.8	8429.05	8056.48
Q6IRK9	Q6IRK9	CBPQ_RAT	Cpq	Carboxypeptidase Q	1	DLGLRPK	DLGLRPK	2	DLGLRPK2	73211	64799.8	
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	DLGLSESGEDVNAAILDESGK	DLGLSESGEDVNAAILDESGK	3	DLGLSESGEDVNAAILDESGK3	92468.2	91099.4	81867.1
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	DLGLSESGEDVNAAILDESGKK	DLGLSESGEDVNAAILDESGKK	3	DLGLSESGEDVNAAILDESGKK3	344014	362537	394319
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	DLGNIIHNLCGHDLPEK	DLGNIIHNLC(UniMod:4)GHDLPEK	3	DLGNIIHNLC(UniMod:4)GHDLPEK3	13278.8	5978.45	11047.5
Q5FVN1	Q5FVN1	STBD1_RAT	Stbd1	Starch-binding domain-containing protein 1	1	DLGNLTEAQR	DLGNLTEAQR	2	DLGNLTEAQR2	12859.1	34237	18949.8
Q66H09	Q66H09	Q66H09_RAT	Ttc1	Tetratricopeptide repeat domain 1	1	DLGNLVLRPFGLSTENFQIK	DLGNLVLRPFGLSTENFQIK	3	DLGNLVLRPFGLSTENFQIK3	15775.8	10026.3	8864.58
F1MA46	F1MA46	F1MA46_RAT	Pcdh12	Protocadherin 12	1	DLGPNSIPGHCK	DLGPNSIPGHC(UniMod:4)K	2	DLGPNSIPGHC(UniMod:4)K2	20890.5	24928.1	30213.1
F1MA46	F1MA46	F1MA46_RAT	Pcdh12	Protocadherin 12	1	DLGPNSIPGHCK	DLGPNSIPGHC(UniMod:4)K	3	DLGPNSIPGHC(UniMod:4)K3	50378.8	88604	74600.8
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	DLGPSGHVTYAILTDTEK	DLGPSGHVTYAILTDTEK	3	DLGPSGHVTYAILTDTEK3	12053.6	7783.75	17391.5
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	DLGQDLAGVIAIQR	DLGQDLAGVIAIQR	2	DLGQDLAGVIAIQR2	39755.3	45475.1	49749.5
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	DLGQDLAGVIAIQR	DLGQDLAGVIAIQR	3	DLGQDLAGVIAIQR3	15487.7	22600.6	19230.3
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	DLGQIEENDLVR	DLGQIEENDLVR	2	DLGQIEENDLVR2	30916	29856.4	22455.4
A0A8I6ANB2	A0A8I6ANB2	A0A8I6ANB2_RAT	Ppfibp1	PPFIA binding protein 1	1	DLGQSNSDLDTPFAK	DLGQSNSDLDTPFAK	2	DLGQSNSDLDTPFAK2	2697.74	1548.37	2015.7
D3ZET9	D4A1G8;D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	0	DLGSLNGTFVNDVR	DLGSLNGTFVNDVR	2	DLGSLNGTFVNDVR2	10905.6	6498.42	7879.5
Q68FU7	Q68FU7	COQ6_RAT	Coq6	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial	1	DLGSMSHLTGYETDR	DLGSMSHLTGYETDR	3	DLGSMSHLTGYETDR3	16089.2	13823.5	11610.5
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	DLGTDSQIFISR	DLGTDSQIFISR	2	DLGTDSQIFISR2	35887.1	28083.8	36821.9
A0A0G2K6R0	A0A0G2K6R0	A0A0G2K6R0_RAT	Tnrc6b	Trinucleotide repeat containing adaptor 6B	1	DLGTTDSGPYFEK	DLGTTDSGPYFEK	2	DLGTTDSGPYFEK2	4658.56	4133.12	10915.8
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	DLGVFIPAPMAQGR	DLGVFIPAPMAQGR	2	DLGVFIPAPMAQGR2	105535	118412	102300
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	DLGVGEQITTVSAIDADELQLVR	DLGVGEQITTVSAIDADELQLVR	3	DLGVGEQITTVSAIDADELQLVR3	20226.6	13949.1	15079.2
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	DLGYIYFYQR	DLGYIYFYQR	2	DLGYIYFYQR2	191743	215742	182987
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	DLGYLQQWLK	DLGYLQQWLK	2	DLGYLQQWLK2	165537	150608	114291
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	DLHECLEAAMIEGEIESLHSDNSGK	DLHEC(UniMod:4)LEAAMIEGEIESLHSDNSGK	4	DLHEC(UniMod:4)LEAAMIEGEIESLHSDNSGK4	7511.65	6328.42	3572.73
Q5U2V8	Q5U2V8	EMC3_RAT	Emc3	ER membrane protein complex subunit 3	1	DLHFEGMFK	DLHFEGMFK	2	DLHFEGMFK2	18592.1	11718.2	13033
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	DLHFLEELQLGHNR	DLHFLEELQLGHNR	2	DLHFLEELQLGHNR2	437289	506841	356045
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	DLHFLEELQLGHNR	DLHFLEELQLGHNR	3	DLHFLEELQLGHNR3	868206	910564	869885
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	DLHFLEELQLGHNR	DLHFLEELQLGHNR	4	DLHFLEELQLGHNR4	1.64224e+06	1.90224e+06	1.70967e+06
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	DLHFLMECNHEYK	DLHFLMEC(UniMod:4)NHEYK	3	DLHFLMEC(UniMod:4)NHEYK3	7104.07		4748.08
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	DLHFLMECNHEYK	DLHFLMEC(UniMod:4)NHEYK	4	DLHFLMEC(UniMod:4)NHEYK4	6139.27	12610.7	10632.4
Q8CIZ5	F1LVL9;Q8CIZ5	DMBT1_RAT	Dmbt1	Deleted in malignant brain tumors 1 protein	0	DLHIHVSCK	DLHIHVSC(UniMod:4)K	2	DLHIHVSC(UniMod:4)K2	87043.1	109764	79827.6
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	DLHIISTGFDEESAILGAGR	DLHIISTGFDEESAILGAGR	3	DLHIISTGFDEESAILGAGR3	56821.4	34356	42917.2
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	DLHISTVEFTNLK	DLHISTVEFTNLK	2	DLHISTVEFTNLK2	6316.7		5669.99
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	DLHISTVEFTNLK	DLHISTVEFTNLK	3	DLHISTVEFTNLK3	5329.02	6165.33	2254.45
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	DLHLGDR	DLHLGDR	2	DLHLGDR2	79967	80840.2	70049.3
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	DLHLSQQCELLR	DLHLSQQC(UniMod:4)ELLR	3	DLHLSQQC(UniMod:4)ELLR3	6031.06	3104.77	5588.95
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	DLHNQIIK	DLHNQIIK	2	DLHNQIIK2	15573.6	17722.2	13369.9
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	DLHPDQR	DLHPDQR	2	DLHPDQR2			8332.85
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	DLHPVPQAR	DLHPVPQAR	2	DLHPVPQAR2	22734.6	21415.4	18776.3
Q6AYF8	Q6AYF8	Q6AYF8_RAT	Serpinb9	Serpin family B member 9	1	DLHQGFQLLLSNLNKPER	DLHQGFQLLLSNLNKPER	3	DLHQGFQLLLSNLNKPER3	2800.04	3640.81	7041.25
Q6AYF8	Q6AYF8	Q6AYF8_RAT	Serpinb9	Serpin family B member 9	1	DLHQGFQLLLSNLNKPER	DLHQGFQLLLSNLNKPER	4	DLHQGFQLLLSNLNKPER4	26348.1	20650.6	22454.8
D4A0G0	D4A0G0	D4A0G0_RAT	Osbpl7	Oxysterol-binding protein	1	DLHQGSELSR	DLHQGSELSR	3	DLHQGSELSR3		24770.5	30313.7
D3ZII8	D3ZII8	D3ZII8_RAT	Smyd5	Histone-lysine N-trimethyltransferase SMYD5	1	DLHQNCPR	DLHQNC(UniMod:4)PR	2	DLHQNC(UniMod:4)PR2			4622.37
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	DLHQNLDGLK	DLHQNLDGLK	2	DLHQNLDGLK2	12706.3	20032.7	7465.4
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	DLHQNLDGLK	DLHQNLDGLK	3	DLHQNLDGLK3	29432.1		35976.6
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	DLHTLDSHVR	DLHTLDSHVR	3	DLHTLDSHVR3	21522.2	24721.4	19409
Q01129	Q01129	PGS2_RAT	Dcn	Decorin	1	DLHTLILVNNK	DLHTLILVNNK	3	DLHTLILVNNK3	26282.9	33912.6	20449
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	DLHTSIQR	DLHTSIQR	2	DLHTSIQR2	139187	129930	130520
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	DLHWAMMAHR	DLHWAMMAHR	3	DLHWAMMAHR3	5502.62	6843.21	13083.6
Q923V4	Q923V4	FBX6_RAT	Fbxo6	F-box only protein 6	1	DLIDVMTLWK	DLIDVMTLWK	2	DLIDVMTLWK2	17554.8	24505.5	21757.7
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	DLIDWTDGIAK	DLIDWTDGIAK	2	DLIDWTDGIAK2	41657.8	50718.9	51099.3
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	DLIEAADTIGQMR	DLIEAADTIGQMR	2	DLIEAADTIGQMR2	2361.69	6260.12	7982.83
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	DLIEQSMLVALEQAGR	DLIEQSMLVALEQAGR	2	DLIEQSMLVALEQAGR2	14252.4	11376.4	7904.91
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	DLIEQSMLVALEQAGR	DLIEQSMLVALEQAGR	3	DLIEQSMLVALEQAGR3	8464.51	6918.18	4365.58
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	DLIESSSYEHGTTFSYVCDDGFR	DLIESSSYEHGTTFSYVC(UniMod:4)DDGFR	3	DLIESSSYEHGTTFSYVC(UniMod:4)DDGFR3	12381.3	7610.02	9097.59
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DLIGVQNLLK	DLIGVQNLLK	2	DLIGVQNLLK2	1.25811e+06	1.2845e+06	1.42426e+06
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DLIGVQNLLKK	DLIGVQNLLKK	2	DLIGVQNLLKK2	4692.1	8477.89	9068.99
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DLIGVQNLLKK	DLIGVQNLLKK	3	DLIGVQNLLKK3	18496	28248.4	26497.5
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	DLIGYLEK	DLIGYLEK	1	DLIGYLEK1	14849.4	11077.7	9581.93
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	DLIGYLEK	DLIGYLEK	2	DLIGYLEK2	757128	916205	823527
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	DLIGYLEKR	DLIGYLEKR	2	DLIGYLEKR2	7282.76	3887.16	14169
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	DLIHDQDEEEEEEEGQR	DLIHDQDEEEEEEEGQR	3	DLIHDQDEEEEEEEGQR3	79708.4	66937.5	70613.7
A0A8I6AL43	A0A8I6AL43	A0A8I6AL43_RAT	Ate1	Arginyl-tRNA--protein transferase 1	1	DLIHPQAIEEK	DLIHPQAIEEK	3	DLIHPQAIEEK3	17929.9	9542.79	16659.9
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	DLIIEQR	DLIIEQR	2	DLIIEQR2	28897.4	35829.8	
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	DLILESK	DLILESK	2	DLILESK2	66505.7	51070.4	52069.3
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	DLILLGATAVEDR	DLILLGATAVEDR	2	DLILLGATAVEDR2	65201.9	59114.1	84109.2
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	DLILQCLDDK	DLILQC(UniMod:4)LDDK	2	DLILQC(UniMod:4)LDDK2	4349.96	4436.83	3394.99
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	DLILQCLDDKDESIR	DLILQC(UniMod:4)LDDKDESIR	2	DLILQC(UniMod:4)LDDKDESIR2	13536.7	11550.5	8571.1
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	DLILQCLDDKDESIR	DLILQC(UniMod:4)LDDKDESIR	3	DLILQC(UniMod:4)LDDKDESIR3	243439	244858	249295
E9PT66	E9PT66	E9PT66_RAT	Sf3b3	Splicing factor 3b, subunit 3	1	DLILSPR	DLILSPR	2	DLILSPR2	14329.3	13124.2	12816.5
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	DLILSVLQR	DLILSVLQR	2	DLILSVLQR2	344681	314068	266682
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	DLILSVLQRDEELRK	DLILSVLQRDEELRK	3	DLILSVLQRDEELRK3	34058	22764.3	33832.8
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	DLINEAMDVK	DLINEAMDVK	2	DLINEAMDVK2	160765	134224	146010
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	DLIPNHLSYYIYNHVAMWPEQSDKWPVSVR	DLIPNHLSYYIYNHVAMWPEQSDKWPVSVR	4	DLIPNHLSYYIYNHVAMWPEQSDKWPVSVR4	6805.79	3910.8	3768.68
P63029	P63029;A0A8I6GKA0	TCTP_RAT	Tpt1	Translationally-controlled tumor protein	0	DLISHDELFSDIYK	DLISHDELFSDIYK	2	DLISHDELFSDIYK2	13583.4	12108	17586.3
P63029	P63029;A0A8I6GKA0	TCTP_RAT	Tpt1	Translationally-controlled tumor protein	0	DLISHDELFSDIYK	DLISHDELFSDIYK	3	DLISHDELFSDIYK3	115670	120403	114573
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	DLIVATIAVK	DLIVATIAVK	2	DLIVATIAVK2	15575.3	12902.9	12718.6
Q2LC84	Q2LC84	NUMB_RAT	Numb	Protein numb homolog	1	DLIVDQTIEK	DLIVDQTIEK	2	DLIVDQTIEK2		55283.3	45997.9
P15684	P15684	AMPN_RAT	Anpep	Aminopeptidase N	1	DLIVLNDVYR	DLIVLNDVYR	2	DLIVLNDVYR2	5217.7	6840.15	3707.38
Q5U2Q4	Q5U2Q4	PAR16_RAT	Parp16	Protein mono-ADP-ribosyltransferase PARP16	1	DLIYAFHGSR	DLIYAFHGSR	2	DLIYAFHGSR2	5915.87	5205.69	8736.49
Q5U2Q4	Q5U2Q4	PAR16_RAT	Parp16	Protein mono-ADP-ribosyltransferase PARP16	1	DLIYAFHGSR	DLIYAFHGSR	3	DLIYAFHGSR3	10565.9	7485.88	16829.8
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	DLKDWVEALNQASK	DLKDWVEALNQASK	3	DLKDWVEALNQASK3		3290.27	4073.53
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	DLKEEFTEALR	DLKEEFTEALR	2	DLKEEFTEALR2	20501.6	14287.8	22793.9
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	DLKEEFTEALR	DLKEEFTEALR	3	DLKEEFTEALR3	20148.4	28775.8	16007.4
D3ZWA8	D3ZWA8	D3ZWA8_RAT	Appl1	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1	1	DLKEILTLK	DLKEILTLK	2	DLKEILTLK2		4034.86	
P51583	P51583;A0A0G2K5S4	PUR6_RAT	Paics	Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase	0	DLKEVTPEGLQMVK	DLKEVTPEGLQMVK	3	DLKEVTPEGLQMVK3	12671.7	12709.7	8764.25
P26817	P26817	ARBK1_RAT	Grk2	Beta-adrenergic receptor kinase 1	1	DLKPANILLDEHGHVR	DLKPANILLDEHGHVR	4	DLKPANILLDEHGHVR4	4886.89	2593.23	7843.41
Q4G050	Q4G050	MKNK1_RAT	Mknk1	MAP kinase-interacting serine/threonine-protein kinase 1	1	DLKPENILCESPEK	DLKPENILC(UniMod:4)ESPEK	3	DLKPENILC(UniMod:4)ESPEK3	18276.6	12876.9	18258
P97711	P97711;P70507	GRK6_RAT	Grk6	G protein-coupled receptor kinase 6	0	DLKPENILLDDHGHIR	DLKPENILLDDHGHIR	3	DLKPENILLDDHGHIR3	20436.2	10784.2	12030.2
P97711	P97711;P70507	GRK6_RAT	Grk6	G protein-coupled receptor kinase 6	0	DLKPENILLDDHGHIR	DLKPENILLDDHGHIR	4	DLKPENILLDDHGHIR4	30236.4	34076.3	24664.6
P31325	P31325	PHKG2_RAT	Phkg2	Phosphorylase b kinase gamma catalytic chain, liver/testis isoform	1	DLKPENILLDDNMQIR	DLKPENILLDDNMQIR	3	DLKPENILLDDNMQIR3	4528.06	19500.5	3947.54
Q62833	Q62833	GRK5_RAT	Grk5	G protein-coupled receptor kinase 5	1	DLKPENILLDDYGHIR	DLKPENILLDDYGHIR	4	DLKPENILLDDYGHIR4	5147.56	4469.23	4700.4
D3Z8E0	Q63531;F1M7N7;D3Z8E0	D3Z8E0_RAT	Rps6ka3	Ribosomal protein S6 kinase	0	DLKPENILLDEEGHIK	DLKPENILLDEEGHIK	3	DLKPENILLDEEGHIK3	10016.2	5910.59	2851.85
D3Z8E0	Q63531;F1M7N7;D3Z8E0	D3Z8E0_RAT	Rps6ka3	Ribosomal protein S6 kinase	0	DLKPENILLDEEGHIK	DLKPENILLDEEGHIK	4	DLKPENILLDEEGHIK4	7485.34	5096.45	4511.72
D4AE24	D4AE24	D4AE24_RAT	Rps6kb2	Ribosomal protein S6 kinase	1	DLKPENIMLNSQGHIK	DLKPENIMLNSQGHIK	3	DLKPENIMLNSQGHIK3	1456.16		
A0A8I6ANR6	A0A8I6ANR6	A0A8I6ANR6_RAT	Chuk	IkappaB kinase	1	DLKPENIVLQDVGGK	DLKPENIVLQDVGGK	3	DLKPENIVLQDVGGK3	11460.1	11968.2	14417.1
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	DLKPENIVLQQGEKR	DLKPENIVLQQGEKR	4	DLKPENIVLQQGEKR4	3672.8		2282.22
A0A8I6A9E8	A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	1	DLKPENLILDHR	DLKPENLILDHR	3	DLKPENLILDHR3	17228.5	12224.9	10425.2
P68182	P68182	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	1	DLKPENLLIDHQGYIQVTDFGFAK	DLKPENLLIDHQGYIQVTDFGFAK	3	DLKPENLLIDHQGYIQVTDFGFAK3	13139.5	19027.4	17225.2
P68182	P68182	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	1	DLKPENLLIDHQGYIQVTDFGFAK	DLKPENLLIDHQGYIQVTDFGFAK	4	DLKPENLLIDHQGYIQVTDFGFAK4	28859.3	25355.5	23365.7
P27791	P27791	KAPCA_RAT	Prkaca	cAMP-dependent protein kinase catalytic subunit alpha	1	DLKPENLLIDQQGYIQVTDFGFAK	DLKPENLLIDQQGYIQVTDFGFAK	3	DLKPENLLIDQQGYIQVTDFGFAK3	27662.2	23619.6	45611.4
P11730	P08413;P15791;P11275;P11730	KCC2G_RAT	Camk2g	Calcium/calmodulin-dependent protein kinase type II subunit gamma	0	DLKPENLLLASK	DLKPENLLLASK	2	DLKPENLLLASK2	17213.3	17934.7	16219.8
P11730	P08413;P15791;P11275;P11730	KCC2G_RAT	Camk2g	Calcium/calmodulin-dependent protein kinase type II subunit gamma	0	DLKPENLLLASK	DLKPENLLLASK	3	DLKPENLLLASK3	51245.5	38185	36713.7
Q63450	Q63450	KCC1A_RAT	Camk1	Calcium/calmodulin-dependent protein kinase type 1	1	DLKPENLLYYSLDEDSK	DLKPENLLYYSLDEDSK	3	DLKPENLLYYSLDEDSK3	8398.26	6331.62	10897.4
A0A8I6AUH0	A0A8I6AUH0	A0A8I6AUH0_RAT	Camk1d	Calcium/calmodulin-dependent protein kinase ID	1	DLKPENLLYYSQDEESK	DLKPENLLYYSQDEESK	3	DLKPENLLYYSQDEESK3	6188.08	4636.36	
P54645	P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	1	DLKPENVLLDAHMNAK	DLKPENVLLDAHMNAK	3	DLKPENVLLDAHMNAK3	22087.1	21166.7	17240.9
P54645	P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	1	DLKPENVLLDAHMNAK	DLKPENVLLDAHMNAK	4	DLKPENVLLDAHMNAK4	35893.4	32225.8	30543.9
Q09137	Q09137	AAPK2_RAT	Prkaa2	5'-AMP-activated protein kinase catalytic subunit alpha-2	1	DLKPENVLLDAQMNAK	DLKPENVLLDAQMNAK	3	DLKPENVLLDAQMNAK3	8196.75	10940	9070.31
Q63184	Q63184	E2AK2_RAT	Eif2ak2	Interferon-induced, double-stranded RNA-activated protein kinase	1	DLKPGNIFLVDEK	DLKPGNIFLVDEK	3	DLKPGNIFLVDEK3	5810.01	4081.78	6176.35
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	DLKPKPITETK	DLKPKPITETK	3	DLKPKPITETK3	20700.3	14121	19042.9
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	DLKPNGANILVTEENK	DLKPNGANILVTEENK	3	DLKPNGANILVTEENK3	3918.53	13972	8238.27
P0C8E4	P0C8E4	M3K7_RAT	Map3k7	Mitogen-activated protein kinase kinase kinase 7	1	DLKPPNLLLVAGGTVLK	DLKPPNLLLVAGGTVLK	3	DLKPPNLLLVAGGTVLK3	15003.3	14792.4	15566.4
Q03114	Q03114	CDK5_RAT	Cdk5	Cyclin-dependent kinase 5	1	DLKPQNLLINR	DLKPQNLLINR	3	DLKPQNLLINR3	26777.8	24726.6	20177.6
D3Z8E0	D3Z8E0	D3Z8E0_RAT	Rps6ka3	Ribosomal protein S6 kinase	1	DLKPSNILYVDESGNPESIR	DLKPSNILYVDESGNPESIR	3	DLKPSNILYVDESGNPESIR3	4342.39	4721.29	12904.1
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	DLKPSNLAVNEDCELK	DLKPSNLAVNEDC(UniMod:4)ELK	2	DLKPSNLAVNEDC(UniMod:4)ELK2	47292.9	60904.9	46748.6
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	DLKPSNLAVNEDCELK	DLKPSNLAVNEDC(UniMod:4)ELK	3	DLKPSNLAVNEDC(UniMod:4)ELK3	495950	517035	521021
P21708	P21708	MK03_RAT	Mapk3	Mitogen-activated protein kinase 3	1	DLKPSNLLINTTCDLK	DLKPSNLLINTTC(UniMod:4)DLK	3	DLKPSNLLINTTC(UniMod:4)DLK3	190227	205721	193845
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	DLKPSNLLLNTTCDLK	DLKPSNLLLNTTC(UniMod:4)DLK	2	DLKPSNLLLNTTC(UniMod:4)DLK2	23877.5	31371	24360.9
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	DLKPSNLLLNTTCDLK	DLKPSNLLLNTTC(UniMod:4)DLK	3	DLKPSNLLLNTTC(UniMod:4)DLK3	6090.41		11432.4
Q9Z2P5	Q9Z2P5	RIPK3_RAT	Ripk3	Receptor-interacting serine/threonine-protein kinase 3	1	DLKPSNVLLDPELHAK	DLKPSNVLLDPELHAK	3	DLKPSNVLLDPELHAK3		3882.79	9254.52
Q9Z2P5	Q9Z2P5	RIPK3_RAT	Ripk3	Receptor-interacting serine/threonine-protein kinase 3	1	DLKPSNVLLDPELHAK	DLKPSNVLLDPELHAK	4	DLKPSNVLLDPELHAK4	11830.1	12325.3	5700.1
Q6IRE4	Q6IRE4	TS101_RAT	Tsg101	Tumor susceptibility gene 101 protein	1	DLKPVLDSYVFNDGSSR	DLKPVLDSYVFNDGSSR	2	DLKPVLDSYVFNDGSSR2	3352.43	4893.71	
Q6IRE4	Q6IRE4	TS101_RAT	Tsg101	Tumor susceptibility gene 101 protein	1	DLKPVLDSYVFNDGSSR	DLKPVLDSYVFNDGSSR	3	DLKPVLDSYVFNDGSSR3	53965.7	73714.4	82982.5
D4A7V9	D4A7V9	E2AK4_RAT	Eif2ak4	eIF-2-alpha kinase GCN2	1	DLKPVNIFLDSDDHVK	DLKPVNIFLDSDDHVK	3	DLKPVNIFLDSDDHVK3	3378.73	5710.72	5149.88
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	DLKQEDFQLLCPDGTK	DLKQEDFQLLC(UniMod:4)PDGTK	2	DLKQEDFQLLC(UniMod:4)PDGTK2	14501	16841.6	17706.1
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	DLKQEDFQLLCPDGTK	DLKQEDFQLLC(UniMod:4)PDGTK	3	DLKQEDFQLLC(UniMod:4)PDGTK3	110425	137764	119546
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	DLKVPESVR	DLKVPESVR	2	DLKVPESVR2	765811	806182	834498
Q5XIE1	Q5XIE1	THEM6_RAT	Them6	Protein THEM6	1	DLLAEQLYAGR	DLLAEQLYAGR	2	DLLAEQLYAGR2	9837.17	11450.8	9088.1
A0A8I5ZQQ3	A0A8I5ZQQ3	A0A8I5ZQQ3_RAT	Pdpr	Pyruvate dehydrogenase phosphatase regulatory subunit	1	DLLALEQSK	DLLALEQSK	2	DLLALEQSK2	11422.7	9765.03	6584.22
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	DLLDLLVEAK	DLLDLLVEAK	2	DLLDLLVEAK2	30258.6	24658.8	30280.1
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	DLLDNQSQEEQR	DLLDNQSQEEQR	2	DLLDNQSQEEQR2	2540.56		
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	DLLDNQSQEEQRR	DLLDNQSQEEQRR	3	DLLDNQSQEEQRR3	11469.5	22077.9	26015.2
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	DLLDPIKELYEDVR	DLLDPIKELYEDVR	2	DLLDPIKELYEDVR2	2587.07		
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	DLLDPIKELYEDVR	DLLDPIKELYEDVR	3	DLLDPIKELYEDVR3	6752.08	4480	4391.43
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	DLLDSVLPHLYNETK	DLLDSVLPHLYNETK	2	DLLDSVLPHLYNETK2	71885.9	101463	95286.9
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	DLLDSVLPHLYNETK	DLLDSVLPHLYNETK	3	DLLDSVLPHLYNETK3	237244	258842	247337
P36953	P36953	AFAM_RAT	Afm	Afamin	1	DLLEDCCNR	DLLEDC(UniMod:4)C(UniMod:4)NR	2	DLLEDC(UniMod:4)C(UniMod:4)NR2	294169	298783	307087
P36953	P36953	AFAM_RAT	Afm	Afamin	1	DLLEDCCNRK	DLLEDC(UniMod:4)C(UniMod:4)NRK	2	DLLEDC(UniMod:4)C(UniMod:4)NRK2	2782.83	5697.06	7664.51
P36953	P36953	AFAM_RAT	Afm	Afamin	1	DLLEDCCNRK	DLLEDC(UniMod:4)C(UniMod:4)NRK	3	DLLEDC(UniMod:4)C(UniMod:4)NRK3	44194.6	53468.3	61055.1
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	DLLEECK	DLLEEC(UniMod:4)K	2	DLLEEC(UniMod:4)K2	10378.1		6909.43
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	DLLEPGCSVLLNHK	DLLEPGC(UniMod:4)SVLLNHK	2	DLLEPGC(UniMod:4)SVLLNHK2	9048.87	5108.44	5593.97
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	DLLEPGCSVLLNHK	DLLEPGC(UniMod:4)SVLLNHK	3	DLLEPGC(UniMod:4)SVLLNHK3	41902.8	32772.2	43983.3
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	DLLETVHVR	DLLETVHVR	2	DLLETVHVR2	81943.5	82344.8	77940.7
P97576	P97576	GRPE1_RAT	Grpel1	GrpE protein homolog 1, mitochondrial	1	DLLEVADILEK	DLLEVADILEK	2	DLLEVADILEK2	10960.6	9647.66	11588.9
A0A8I5ZZ05	A0A8I5ZZ05	A0A8I5ZZ05_RAT	Soga1	Suppressor of glucose, autophagy associated 1	1	DLLEWEPR	DLLEWEPR	2	DLLEWEPR2	1863.35	4196.38	
A0A8I5ZUE7	A0A8I5ZUE7	A0A8I5ZUE7_RAT	Zc3h7b	Zinc finger CCCH-type containing 7B	1	DLLFDPLGGVK	DLLFDPLGGVK	2	DLLFDPLGGVK2	13130.1	9274.55	6758.46
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	DLLFGSIVAMEEPTRPIYR	DLLFGSIVAMEEPTRPIYR	3	DLLFGSIVAMEEPTRPIYR3	168851	186721	160599
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	DLLFILTAK	DLLFILTAK	2	DLLFILTAK2	33748.1	47952.2	37080.5
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	DLLFKDSAFGLLR	DLLFKDSAFGLLR	3	DLLFKDSAFGLLR3	6059.59	7945.79	5838.89
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	DLLFKPVAELR	DLLFKPVAELR	2	DLLFKPVAELR2	65620.2	36300.4	53790
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	DLLFKPVAELR	DLLFKPVAELR	3	DLLFKPVAELR3	46786.8	58265.8	61986.8
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	DLLFKPVAELRK	DLLFKPVAELRK	3	DLLFKPVAELRK3	36863	41476.7	33776.5
Q68FT7	Q68FT7	Q68FT7_RAT	Farsb	Phenylalanine--tRNA ligase beta subunit	1	DLLFQVLGR	DLLFQVLGR	2	DLLFQVLGR2	6955.95		8073.76
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	DLLFRDDTK	DLLFRDDTK	2	DLLFRDDTK2	216409	274762	278877
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	DLLFSDDTECLSNLQNK	DLLFSDDTEC(UniMod:4)LSNLQNK	3	DLLFSDDTEC(UniMod:4)LSNLQNK3	28767.1	16783.1	
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	DLLFTDAACGLLR	DLLFTDAAC(UniMod:4)GLLR	2	DLLFTDAAC(UniMod:4)GLLR2	95136.5	81077.3	117002
D4A529	D4A529	D4A529_RAT	She	Src homology 2 domain containing E	1	DLLGKPPQLYDTPYEPSEGDLR	DLLGKPPQLYDTPYEPSEGDLR	3	DLLGKPPQLYDTPYEPSEGDLR3	40155	52964.4	53014.1
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	DLLGLCEQK	DLLGLC(UniMod:4)EQK	2	DLLGLC(UniMod:4)EQK2	12320.4	14136.3	9111.61
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	DLLGQDVFLIGPPGPLR	DLLGQDVFLIGPPGPLR	2	DLLGQDVFLIGPPGPLR2	6169.95	2933.02	7685.05
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	DLLGWVSTLAR	DLLGWVSTLAR	2	DLLGWVSTLAR2	13590.8	15115.2	9149.53
Q71TY3	M0RA26;A0A8L2QXZ3;Q71TY3;A0A8I5Y7E5	RS27_RAT	Rps27	Small ribosomal subunit protein eS27	0	DLLHPSPEEEK	DLLHPSPEEEK	2	DLLHPSPEEEK2	5936.32	4416.9	2536.05
D3ZAI6	D3ZAI6	D3ZAI6_RAT	Nt5dc3	5'-nucleotidase domain containing 3	1	DLLINEHR	DLLINEHR	2	DLLINEHR2	7302.66	4014.76	6801.25
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	DLLIYDSMPR	DLLIYDSMPR	2	DLLIYDSMPR2	203507	179058	221001
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	DLLLAIHPPNYIVLWNADTGTK	DLLLAIHPPNYIVLWNADTGTK	3	DLLLAIHPPNYIVLWNADTGTK3	4794.77	3125.2	3499.5
Q9Z1P2	Q9QXQ0;Q8R4I6;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	DLLLDPAWEK	DLLLDPAWEK	2	DLLLDPAWEK2	46114.3	58087.8	53862.3
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	DLLLGPCVDLPLTAR	DLLLGPC(UniMod:4)VDLPLTAR	2	DLLLGPC(UniMod:4)VDLPLTAR2	251066	239700	211479
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	DLLLGPCVDLPLTAR	DLLLGPC(UniMod:4)VDLPLTAR	3	DLLLGPC(UniMod:4)VDLPLTAR3	17778.3	23971.6	18759.1
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	DLLLHDQCQITTLR	DLLLHDQC(UniMod:4)QITTLR	2	DLLLHDQC(UniMod:4)QITTLR2	17378.7	15959.1	13977
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	DLLLHDQCQITTLR	DLLLHDQC(UniMod:4)QITTLR	3	DLLLHDQC(UniMod:4)QITTLR3	211708	220011	221238
Q9ES02	Q9ES02	MEPE_RAT	Mepe	Matrix extracellular phosphoglycoprotein	1	DLLLQNSPGQSK	DLLLQNSPGQSK	2	DLLLQNSPGQSK2	4432.39	11121.4	14850.6
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	DLLLTCAQDR	DLLLTC(UniMod:4)AQDR	2	DLLLTC(UniMod:4)AQDR2	77675.2	86890.3	50100.8
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	DLLMHSR	DLLMHSR	2	DLLMHSR2	4013.02	9507.41	6527.48
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	DLLMVPMQR	DLLMVPMQR	2	DLLMVPMQR2	47968.4	61479.6	57510.6
Q80Z29	Q80Z29	NAMPT_RAT	Nampt	Nicotinamide phosphoribosyltransferase	1	DLLNCSFK	DLLNC(UniMod:4)SFK	2	DLLNC(UniMod:4)SFK2	20419.9	8877.55	12752.1
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	DLLNCYQMETVR	DLLNC(UniMod:4)YQMETVR	2	DLLNC(UniMod:4)YQMETVR2	58744.3	53531.6	58167.3
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	DLLNELGSPK	DLLNELGSPK	2	DLLNELGSPK2	59521.2	40085.8	50674.1
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	DLLNHAFFQEETGVR	DLLNHAFFQEETGVR	3	DLLNHAFFQEETGVR3	4428.58	4380.72	2590.79
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	DLLNMYIETEGK	DLLNMYIETEGK	2	DLLNMYIETEGK2	41907.1	42581	35277.7
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	DLLNNHILK	DLLNNHILK	2	DLLNNHILK2	20313.5	11983	11718.2
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	DLLPASLGSYYR	DLLPASLGSYYR	2	DLLPASLGSYYR2	963524	1.12152e+06	1.03401e+06
A0A0G2QC02	A0A0G2QC02	A0A0G2QC02_RAT	Skic2	Ski2 like RNA helicase	1	DLLPGEYVQMAGR	DLLPGEYVQMAGR	2	DLLPGEYVQMAGR2	6988.42	5867.19	12179.1
Q32KK0	Q32KK0	Q32KK0_RAT	Arsl	Arylsulfatase E	1	DLLPLLR	DLLPLLR	2	DLLPLLR2	22376.9	9100.56	14882.4
Q5I0C3	Q5I0C3	MCCA_RAT	Mccc1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	1	DLLPTHSTIAK	DLLPTHSTIAK	3	DLLPTHSTIAK3	24164.2	21596.8	31065.8
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	DLLPVMCDR	DLLPVMC(UniMod:4)DR	2	DLLPVMC(UniMod:4)DR2	14797.1	14346.1	19325.7
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	DLLQFFKPR	DLLQFFKPR	2	DLLQFFKPR2	5128.09	4897.7	1485.72
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	DLLQFFKPR	DLLQFFKPR	3	DLLQFFKPR3	50485.5	63618	66995.3
Q8R431	Q8R431	MGLL_RAT	Mgll	Monoglyceride lipase	1	DLLQHVNTVQK	DLLQHVNTVQK	2	DLLQHVNTVQK2	7218.59	4901.39	4262.2
Q8R431	Q8R431	MGLL_RAT	Mgll	Monoglyceride lipase	1	DLLQHVNTVQK	DLLQHVNTVQK	3	DLLQHVNTVQK3	50503	66260	47230.2
Q03114	Q03114	CDK5_RAT	Cdk5	Cyclin-dependent kinase 5	1	DLLQNLLK	DLLQNLLK	2	DLLQNLLK2	18390.5	11521.7	26160.4
Q68FQ9	Q68FQ9	Q68FQ9_RAT	Lancl2	LanC lantibiotic synthetase component C-like 2 (Bacterial)	1	DLLQQMEEGLK	DLLQQMEEGLK	2	DLLQQMEEGLK2	5807.83	5365.96	3250.41
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	DLLQSAK	DLLQSAK	2	DLLQSAK2	152780	112696	132960
A0A0G2K059	A0A0G2K059	A0A0G2K059_RAT	Mcu	Calcium uniporter protein	1	DLLSHENAETLNDVK	DLLSHENAETLNDVK	2	DLLSHENAETLNDVK2	9446.39	10026.7	9254.3
A0A0G2K059	A0A0G2K059	A0A0G2K059_RAT	Mcu	Calcium uniporter protein	1	DLLSHENAETLNDVK	DLLSHENAETLNDVK	3	DLLSHENAETLNDVK3	81192.2	84353.9	100477
Q6IRJ7	Q6IRJ7	Q6IRJ7_RAT	Anxa7	Annexin	1	DLLSSVSR	DLLSSVSR	2	DLLSSVSR2	200719	189621	203123
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	DLLTAYYDVDYEK	DLLTAYYDVDYEK	2	DLLTAYYDVDYEK2	138084	121485	140396
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	DLLTAYYDVDYEK	DLLTAYYDVDYEK	3	DLLTAYYDVDYEK3	7153.23	2729.24	5827.98
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	DLLTELQK	DLLTELQK	2	DLLTELQK2	17046.7	15515.6	14968.2
D3ZQK4	D3ZQK4	D3ZQK4_RAT	Txndc16	Thioredoxin domain containing 16	1	DLLTFIQLNK	DLLTFIQLNK	2	DLLTFIQLNK2	3894.25		3460.85
D4A5S9	D4A5S9	D4A5S9_RAT	Prpf39	Pre-mRNA processing factor 39	1	DLLTGEQFIQLR	DLLTGEQFIQLR	2	DLLTGEQFIQLR2	4364.07	12106.6	8531.84
A0A8I6AHQ9	A0A8I6AHQ9	A0A8I6AHQ9_RAT	Xpot	Exportin-T	1	DLLTPLMER	DLLTPLMER	2	DLLTPLMER2	6223.27	8407.56	7301.05
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	DLLTVDLSR	DLLTVDLSR	2	DLLTVDLSR2	298148	189776	159897
A1L1I3	A1L1I3	NUMBL_RAT	Numbl	Numb-like protein	1	DLLVDQTIEK	DLLVDQTIEK	2	DLLVDQTIEK2	58248.6		
A0A0G2JXD9	A0A0G2JXD9	A0A0G2JXD9_RAT	Dop1b	DOP1 leucine zipper like protein B	1	DLLVEALAEILHQK	DLLVEALAEILHQK	3	DLLVEALAEILHQK3	4743.01		
A0A0G2KAU4	A0A0G2KAU4	A0A0G2KAU4_RAT	Rasgrp3	RAS guanyl releasing protein 3	1	DLLVLACR	DLLVLAC(UniMod:4)R	2	DLLVLAC(UniMod:4)R2	11945.9	11975.8	8784.06
Q63584	Q63584	TMEDA_RAT	Tmed10	Transmembrane emp24 domain-containing protein 10	1	DLLVTGAYEITDQSGGAGGLR	DLLVTGAYEITDQSGGAGGLR	3	DLLVTGAYEITDQSGGAGGLR3	25145.5	37844.6	27325.4
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	DLLVTNTR	DLLVTNTR	2	DLLVTNTR2	70574.9	52104.2	50368
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	DLLVVPMQR	DLLVVPMQR	2	DLLVVPMQR2	180600	211187	176604
O88658	O88658	KIF1B_RAT	Kif1b	Kinesin-like protein KIF1B	1	DLLWGNAVYLK	DLLWGNAVYLK	2	DLLWGNAVYLK2	52713.6	50129.7	58801.2
D4ADE8	Q64060;D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	DLMACAQTGSGK	DLMAC(UniMod:4)AQTGSGK	2	DLMAC(UniMod:4)AQTGSGK2	33727.6	33480.9	25722.4
Q32KK2	Q32KK2	Q32KK2_RAT	Arsa	Arylsulfatase A	1	DLMADAQR	DLMADAQR	2	DLMADAQR2	13800.9	12891.8	12463.1
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	DLMDSNGIR	DLMDSNGIR	2	DLMDSNGIR2	9675.43	25211.1	23092.3
D3ZSU7	D3ZSU7	D3ZSU7_RAT	Mien1	Migration and invasion enhancer 1	1	DLMEAIR	DLMEAIR	2	DLMEAIR2	28713.5	6659.79	15696
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	DLMEAQEWCR	DLMEAQEWC(UniMod:4)R	2	DLMEAQEWC(UniMod:4)R2	7296.94	8457.9	3355.5
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	DLMENYQIVVSNLAAER	DLMENYQIVVSNLAAER	3	DLMENYQIVVSNLAAER3	10469	6051.33	5582.31
F7FHP0	F7FHP0	F7FHP0_RAT	Angptl3	Angiopoietin-like 3	1	DLMFSTWDHR	DLMFSTWDHR	3	DLMFSTWDHR3	19689.6	17564.6	13483.5
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	DLMGYVSGFGITEDK	DLMGYVSGFGITEDK	2	DLMGYVSGFGITEDK2	48303.6	31043.8	19440.2
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	DLMGYVSGFGITEDK	DLMGYVSGFGITEDK	3	DLMGYVSGFGITEDK3		2362.23	2464.73
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	DLMHGLITLMLDSR	DLMHGLITLMLDSR	2	DLMHGLITLMLDSR2	6907.42		
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	DLMHGLITLMLDSR	DLMHGLITLMLDSR	3	DLMHGLITLMLDSR3		3026.6	8101.11
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	DLMLMSHLQDNIQHADPPVQILYNR	DLMLMSHLQDNIQHADPPVQILYNR	4	DLMLMSHLQDNIQHADPPVQILYNR4	66408.8	55317.5	56526.5
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	DLMLWMEDVIR	DLMLWMEDVIR	2	DLMLWMEDVIR2	56820.7		
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	DLMPHDLAR	DLMPHDLAR	2	DLMPHDLAR2	78039.4	48532.9	61799.3
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DLMSWINGIR	DLMSWINGIR	2	DLMSWINGIR2	135395	193948	179175
D3ZBM3	D3ZBM3	D3ZBM3_RAT	Fech	Ferrochelatase	1	DLMTLPIQNK	DLMTLPIQNK	2	DLMTLPIQNK2	3307	1532.35	2925.46
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	DLMVAQFSTPSLPPSLK	DLMVAQFSTPSLPPSLK	2	DLMVAQFSTPSLPPSLK2	11418.3	11485.3	10748.4
Q5M7U6	Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	1	DLMVGDEASELR	DLMVGDEASELR	2	DLMVGDEASELR2	1.00665e+06	985520	1.08929e+06
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	DLMVSQVVHK	DLMVSQVVHK	2	DLMVSQVVHK2	373699	254831	296074
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	DLMVSQVVHK	DLMVSQVVHK	3	DLMVSQVVHK3	767320	773774	789325
O88422	O88422	GALT5_RAT	Galnt5	Polypeptide N-acetylgalactosaminyltransferase 5	1	DLNAPGQFGR	DLNAPGQFGR	2	DLNAPGQFGR2	22196.8	16894.2	15596.1
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	DLNAVAFR	DLNAVAFR	2	DLNAVAFR2	33803	20548.8	15568.9
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	DLNCVPEIADTLGAVAK	DLNC(UniMod:4)VPEIADTLGAVAK	2	DLNC(UniMod:4)VPEIADTLGAVAK2	55330.4	77639.8	76898.4
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	DLNCVPEIADTLGAVAK	DLNC(UniMod:4)VPEIADTLGAVAK	3	DLNC(UniMod:4)VPEIADTLGAVAK3	6349.72	5865.35	11509.7
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	DLNEQFKK	DLNEQFKK	2	DLNEQFKK2	25147.2	27989.6	22160.9
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	DLNEVITIK	DLNEVITIK	2	DLNEVITIK2	20559.1	23356.5	23058.9
P27605	P27605	HPRT_RAT	Hprt1	Hypoxanthine-guanine phosphoribosyltransferase	1	DLNHVCVISESGK	DLNHVC(UniMod:4)VISESGK	2	DLNHVC(UniMod:4)VISESGK2	5260.37	4459.89	3383.75
P27605	P27605	HPRT_RAT	Hprt1	Hypoxanthine-guanine phosphoribosyltransferase	1	DLNHVCVISESGK	DLNHVC(UniMod:4)VISESGK	3	DLNHVC(UniMod:4)VISESGK3	60046.9	40325.6	50968.5
Q9JID1	Q9JID1	PDCD4_RAT	Pdcd4	Programmed cell death protein 4	1	DLNLGEMK	DLNLGEMK	2	DLNLGEMK2	7880.06	14639.6	27661.3
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	DLNLMDIK	DLNLMDIK	2	DLNLMDIK2	68491.7	86141.9	82773
P01026	P01026	CO3_RAT	C3	Complement C3	1	DLNMDVSLHLPSR	DLNMDVSLHLPSR	2	DLNMDVSLHLPSR2	453899	422664	288046
P01026	P01026	CO3_RAT	C3	Complement C3	1	DLNMDVSLHLPSR	DLNMDVSLHLPSR	3	DLNMDVSLHLPSR3	1.72412e+06	1.65949e+06	1.53602e+06
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	DLNPDVNVFQR	DLNPDVNVFQR	2	DLNPDVNVFQR2	122714	115649	123891
Q811U3	Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	1	DLNQLFQQDSSSR	DLNQLFQQDSSSR	2	DLNQLFQQDSSSR2	12257.2	7925.81	16526.3
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	DLNSGLVGALLVCK	DLNSGLVGALLVC(UniMod:4)K	2	DLNSGLVGALLVC(UniMod:4)K2	119259	104266	100121
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	DLNSGLVGALLVCK	DLNSGLVGALLVC(UniMod:4)K	3	DLNSGLVGALLVC(UniMod:4)K3	6541.5	4797.35	8827.19
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	DLNSLFTPDYELLTENDMLPNMR	DLNSLFTPDYELLTENDMLPNMR	3	DLNSLFTPDYELLTENDMLPNMR3	6730.81		
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DLNSQADSLMTSSAFDTSQVK	DLNSQADSLMTSSAFDTSQVK	3	DLNSQADSLMTSSAFDTSQVK3	95862.4	102765	103233
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	DLNSVVIAVK	DLNSVVIAVK	2	DLNSVVIAVK2			4661.31
B2RYN3	B2RYN3	B2RYN3_RAT	Eef1e1	Eukaryotic translation elongation factor 1 epsilon 1	1	DLNSYLEDK	DLNSYLEDK	2	DLNSYLEDK2	28202.3	11969.7	21012.9
B1WBY7	B1WBY7	B1WBY7_RAT	Erlin1	Erlin	1	DLNTMAPGLTIQAVR	DLNTMAPGLTIQAVR	2	DLNTMAPGLTIQAVR2	20020.2	16420.9	19277.7
A0A8I6GDA1	A0A8I6GDA1	A0A8I6GDA1_RAT	Arhgap21	Rho GTPase activating protein 21	1	DLNVISSLLK	DLNVISSLLK	2	DLNVISSLLK2		2236.07	6588.01
Q8VHV7	Q8VHV7;Q6AY09	HNRH1_RAT	Hnrnph1	Heterogeneous nuclear ribonucleoprotein H	0	DLNYCFSGMSDHR	DLNYC(UniMod:4)FSGMSDHR	3	DLNYC(UniMod:4)FSGMSDHR3	5470.2	5011.4	
P85971	P85971	6PGL_RAT	Pgls	6-phosphogluconolactonase	1	DLPAATAPAGPASFAR	DLPAATAPAGPASFAR	2	DLPAATAPAGPASFAR2	48729.3	53954.6	44836.8
Q80WD1	Q80WD1	R4RL2_RAT	Rtn4rl2	Reticulon-4 receptor-like 2	1	DLPAEDSR	DLPAEDSR	2	DLPAEDSR2	81477.7	67621.6	74674.6
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	DLPAENR	DLPAENR	2	DLPAENR2	1.79033e+06	2.31282e+06	1.87913e+06
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	DLPDGLFTR	DLPDGLFTR	2	DLPDGLFTR2	52562.9	173381	114255
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	DLPDPYVSVLLLPDK	DLPDPYVSVLLLPDK	2	DLPDPYVSVLLLPDK2	85407.3	72484.2	69850.3
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	DLPDPYVSVLLLPDK	DLPDPYVSVLLLPDK	3	DLPDPYVSVLLLPDK3	4555.8	3511.72	10127.3
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	DLPDPYVSVLLLPDKNR	DLPDPYVSVLLLPDKNR	2	DLPDPYVSVLLLPDKNR2	10527.6	14591.5	13921.4
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	DLPDPYVSVLLLPDKNR	DLPDPYVSVLLLPDKNR	3	DLPDPYVSVLLLPDKNR3	32698.9	37211.7	32329.9
B2RYI2	B2RYI2	B2RYI2_RAT	Srp68	Signal recognition particle subunit SRP68	1	DLPDVQELITQVR	DLPDVQELITQVR	2	DLPDVQELITQVR2	16599.5	11596	15357.9
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	DLPEAVR	DLPEAVR	2	DLPEAVR2	61248.2	77673.7	56874.2
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	DLPEEYLSAIYNEIAGK	DLPEEYLSAIYNEIAGK	2	DLPEEYLSAIYNEIAGK2	4270.76		
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	DLPEEYLSSIYEEIEGKK	DLPEEYLSSIYEEIEGKK	3	DLPEEYLSSIYEEIEGKK3	4618.83	4855.13	7868.63
Q9JID1	Q9JID1	PDCD4_RAT	Pdcd4	Programmed cell death protein 4	1	DLPELALDTPR	DLPELALDTPR	2	DLPELALDTPR2	25805.6	25006.8	26444.5
P47853	P47853	PGS1_RAT	Bgn	Biglycan	1	DLPETLNELHLDHNK	DLPETLNELHLDHNK	3	DLPETLNELHLDHNK3	18370.6	20063.8	4287.29
P47853	P47853	PGS1_RAT	Bgn	Biglycan	1	DLPETLNELHLDHNK	DLPETLNELHLDHNK	4	DLPETLNELHLDHNK4	23785.9	20267.3	13962.2
E9PT90	E9PT90	E9PT90_RAT	Spart	Spartin	1	DLPEWSEK	DLPEWSEK	2	DLPEWSEK2	24533.8	28850.4	44733.6
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	DLPFIVSHR	DLPFIVSHR	2	DLPFIVSHR2	53475.1	60619.4	55866.3
F1M2D4	F1M2D4	F1M2D4_RAT	Arhgap23	Rho GTPase activating protein 23	1	DLPGHYYETLK	DLPGHYYETLK	3	DLPGHYYETLK3	3630.88		
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	DLPGLPGEPR	DLPGLPGEPR	2	DLPGLPGEPR2	153249	151155	157623
D4ADQ1	D4ADQ1	D4ADQ1_RAT	Rrm2b	Ribonucleotide reductase regulatory TP53 inducible subunit M2B	1	DLPHWNK	DLPHWNK	2	DLPHWNK2	28899.7	31179.6	30647.6
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	DLPIRPGETFK	DLPIRPGETFK	2	DLPIRPGETFK2	57926.1	68341	56041.9
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	DLPIRPGETFK	DLPIRPGETFK	3	DLPIRPGETFK3	775559	721206	812677
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	DLPITEAVFSALVTGHAR	DLPITEAVFSALVTGHAR	3	DLPITEAVFSALVTGHAR3	3966.16	3408.54	5623.45
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	DLPLPTENPR	DLPLPTENPR	2	DLPLPTENPR2	81613	98979.5	118648
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	DLPMNPRPQESR	DLPMNPRPQESR	3	DLPMNPRPQESR3	19741.3	44235.7	36287.4
Q66HA6	Q66HA6	ARL8B_RAT	Arl8b	ADP-ribosylation factor-like protein 8B	1	DLPNALDEK	DLPNALDEK	2	DLPNALDEK2	458353	428916	460753
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	DLPPILLVR	DLPPILLVR	2	DLPPILLVR2	57412.2	61888.4	61131.5
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	DLPPKPQLGDLLAK	DLPPKPQLGDLLAK	3	DLPPKPQLGDLLAK3	25597	35772.2	15046.7
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	DLPPVSGSIIWAK	DLPPVSGSIIWAK	2	DLPPVSGSIIWAK2	294783	402356	270455
D4A7R3	D4A7R3	D4A7R3_RAT	Nup205	Nucleoporin 205	1	DLPSADSVQYR	DLPSADSVQYR	2	DLPSADSVQYR2	11783	9996.32	10922
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	DLPSFLVPSLPSPQK	DLPSFLVPSLPSPQK	2	DLPSFLVPSLPSPQK2	161797	238817	220394
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	DLPSFLVPSLPSPQK	DLPSFLVPSLPSPQK	3	DLPSFLVPSLPSPQK3	5986.86	14925.9	10182.2
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	DLPSPIEK	DLPSPIEK	1	DLPSPIEK1	1.27304e+06	1.3889e+06	1.39258e+06
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	DLPSPIEK	DLPSPIEK	2	DLPSPIEK2	3.38655e+07	3.71964e+07	3.54664e+07
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	DLPTAELMK	DLPTAELMK	2	DLPTAELMK2	928608	976842	1.01548e+06
O88377	O88377	PI42B_RAT	Pip4k2b	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta	1	DLPTFKDNDFLNEGQK	DLPTFKDNDFLNEGQK	3	DLPTFKDNDFLNEGQK3	17559.6	21555.9	21542.8
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	DLPVHACSYCGIHDPACVVYCNTSK	DLPVHAC(UniMod:4)SYC(UniMod:4)GIHDPAC(UniMod:4)VVYC(UniMod:4)NTSK	4	DLPVHAC(UniMod:4)SYC(UniMod:4)GIHDPAC(UniMod:4)VVYC(UniMod:4)NTSK4	16307.7	30061.1	25066.2
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	DLPVSEQQER	DLPVSEQQER	2	DLPVSEQQER2	467005	398556	464602
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	DLPVSINFR	DLPVSINFR	2	DLPVSINFR2	291987	265942	257364
A0A8I6AR22	A0A8I6AR22	A0A8I6AR22_RAT	Zdhhc20	Palmitoyltransferase	1	DLPVYTTSASK	DLPVYTTSASK	2	DLPVYTTSASK2	91411.2	85795.7	94106.6
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	DLQAGTIYNFR	DLQAGTIYNFR	2	DLQAGTIYNFR2	31209.7	34765.8	24706.6
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	DLQAICGLSCDELSSMVLELR	DLQAIC(UniMod:4)GLSC(UniMod:4)DELSSMVLELR	3	DLQAIC(UniMod:4)GLSC(UniMod:4)DELSSMVLELR3	41017.5	45876	51713.7
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	DLQAICGLSCDELSSMVLELR	DLQAIC(UniMod:4)GLSC(UniMod:4)DELSSMVLELR	4	DLQAIC(UniMod:4)GLSC(UniMod:4)DELSSMVLELR4	4163.84	1413.74	8083.89
Q63054	Q63054	ICA69_RAT	Ica1	Islet cell autoantigen 1	1	DLQASLQEPAK	DLQASLQEPAK	2	DLQASLQEPAK2	5436.64	5167.46	11652.9
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	DLQDAENFFQFQGDADDLK	DLQDAENFFQFQGDADDLK	3	DLQDAENFFQFQGDADDLK3	7264.26	2003.32	8123.74
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	DLQDAVTELSNEFK	DLQDAVTELSNEFK	2	DLQDAVTELSNEFK2	54066.3	45405.7	44935.8
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	DLQDAVTELSNEFK	DLQDAVTELSNEFK	3	DLQDAVTELSNEFK3	10361.4	11102.9	12623.6
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	DLQDAVTELSNEFKEGGEPITDDSTSLHK	DLQDAVTELSNEFKEGGEPITDDSTSLHK	4	DLQDAVTELSNEFKEGGEPITDDSTSLHK4	14729.9	18435.3	16606.9
F1LU27	F1LU27	F1LU27_RAT	Focad	Focadhesin	1	DLQDLYSIR	DLQDLYSIR	2	DLQDLYSIR2	12934.2	12198.3	14723.2
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	DLQDPPPQATPEVQVQSHHFSPEER	DLQDPPPQATPEVQVQSHHFSPEER	4	DLQDPPPQATPEVQVQSHHFSPEER4	16108.6	9815.67	17762.9
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	DLQDQLK	DLQDQLK	1	DLQDQLK1	1316.35		1483.91
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	DLQDQLK	DLQDQLK	2	DLQDQLK2	103327	125192	138683
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	DLQEEVSNLYNNIR	DLQEEVSNLYNNIR	2	DLQEEVSNLYNNIR2	9979.44	4499.82	
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	DLQEEVSNLYNNIR	DLQEEVSNLYNNIR	3	DLQEEVSNLYNNIR3	42661.6	26861.6	19870.4
A0A0G2JXD9	A0A0G2JXD9	A0A0G2JXD9_RAT	Dop1b	DOP1 leucine zipper like protein B	1	DLQEITQR	DLQEITQR	2	DLQEITQR2	9912.95		6281.39
Q6UK00	Q6UK00	LDAF1_RAT	Ldaf1	Lipid droplet assembly factor 1	1	DLQELQR	DLQELQR	2	DLQELQR2	18439.7	16484.9	
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	DLQESISR	DLQESISR	2	DLQESISR2	12094.3	9931.04	
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	DLQFLLR	DLQFLLR	2	DLQFLLR2	39902.8	38777.7	33143.2
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	DLQFSDIGETSAK	DLQFSDIGETSAK	2	DLQFSDIGETSAK2	191938	198557	210125
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	DLQFVEVTDVK	DLQFVEVTDVK	2	DLQFVEVTDVK2	4.57623e+06	5.72653e+06	4.54663e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	DLQFVEVTDVK	DLQFVEVTDVK	3	DLQFVEVTDVK3	85956.7	92375.5	89863.1
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	DLQGAVDDLDADMK	DLQGAVDDLDADMK	2	DLQGAVDDLDADMK2	71862.2	80724.5	77241
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	DLQGAVDDLDADMKEVEAVR	DLQGAVDDLDADMKEVEAVR	3	DLQGAVDDLDADMKEVEAVR3	6926.91	13295.8	13888.3
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	DLQGDIQNHSTSFATAVK	DLQGDIQNHSTSFATAVK	3	DLQGDIQNHSTSFATAVK3	25913.5	28541.1	24115
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DLQGRDEQSEEK	DLQGRDEQSEEK	2	DLQGRDEQSEEK2	97766.4		41695.2
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DLQGRDEQSEEK	DLQGRDEQSEEK	3	DLQGRDEQSEEK3			53546.1
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DLQGRDEQSEEKK	DLQGRDEQSEEKK	3	DLQGRDEQSEEKK3			85017.7
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DLQGRDEQSEEKK	DLQGRDEQSEEKK	4	DLQGRDEQSEEKK4			16993.9
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	DLQGSLDLDGK	DLQGSLDLDGK	2	DLQGSLDLDGK2	3691.76	5758.03	8254.61
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	DLQHIWPFMYGDYIAYDCWLGK	DLQHIWPFMYGDYIAYDC(UniMod:4)WLGK	3	DLQHIWPFMYGDYIAYDC(UniMod:4)WLGK3	6911.21		
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	DLQHPNEFIR	DLQHPNEFIR	2	DLQHPNEFIR2	98343.7	73911.9	66951
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	DLQHPNEFIR	DLQHPNEFIR	3	DLQHPNEFIR3	120101	115601	128802
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	DLQIKPGESLEVIQSTDDTK	DLQIKPGESLEVIQSTDDTK	3	DLQIKPGESLEVIQSTDDTK3	1.16594e+06	1.28488e+06	1.2193e+06
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	DLQIYTR	DLQIYTR	2	DLQIYTR2	203816	231045	230239
Q9JI03	Q9JI03	CO5A1_RAT	Col5a1	Collagen alpha-1(V) chain	1	DLQLCHPDFPDGEYWVDPNQGCSR	DLQLC(UniMod:4)HPDFPDGEYWVDPNQGC(UniMod:4)SR	3	DLQLC(UniMod:4)HPDFPDGEYWVDPNQGC(UniMod:4)SR3	32044.3	29282.6	23890.1
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	DLQLEVDQLR	DLQLEVDQLR	2	DLQLEVDQLR2	47338.2	46118.2	39185.8
P08650	P08650	CO5_RAT	C5	Complement C5	1	DLQLLHQK	DLQLLHQK	2	DLQLLHQK2	124971	253653	167551
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	DLQLQCEANVR	DLQLQC(UniMod:4)EANVR	2	DLQLQC(UniMod:4)EANVR2	98938	106919	73106.1
A0A8I5Y7I2	A0A8I5Y7I2	A0A8I5Y7I2_RAT	Kctd12	Potassium channel tetramerization domain containing 12	1	DLQLVLPDYFPER	DLQLVLPDYFPER	2	DLQLVLPDYFPER2	69703.3	61409	67076.4
A0A8I5Y7I2	A0A8I5Y7I2	A0A8I5Y7I2_RAT	Kctd12	Potassium channel tetramerization domain containing 12	1	DLQLVLPDYFPER	DLQLVLPDYFPER	3	DLQLVLPDYFPER3	3021.78	2903.02	3100.96
Q5XIH7	Q5XIH7	PHB2_RAT	Phb2	Prohibitin-2	1	DLQMVNISLR	DLQMVNISLR	2	DLQMVNISLR2	157255	141425	175479
P29994	P29994;Q63269	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	0	DLQNFLR	DLQNFLR	2	DLQNFLR2	64857.3	58837.8	65330
Q5PPN7	Q5PPN7	MITOK_RAT	Ccdc51	Mitochondrial potassium channel	1	DLQNLMVDLR	DLQNLMVDLR	2	DLQNLMVDLR2	677.926	3635.95	4457.57
P67779	P67779;A0A8I5ZUY9	PHB1_RAT	Phb1	Prohibitin 1	0	DLQNVNITLR	DLQNVNITLR	2	DLQNVNITLR2	132510	126123	140591
Q6IFW6	Q6IFW6	K1C10_RAT	Krt10	Keratin, type I cytoskeletal 10	1	DLQNVSTGDVNVEMNAAPGVDLTQLLNNMR	DLQNVSTGDVNVEMNAAPGVDLTQLLNNMR	4	DLQNVSTGDVNVEMNAAPGVDLTQLLNNMR4	95957.4	58921.4	89151.7
Q5FWT9	Q5FWT9	SIKE1_RAT	Sike1	Suppressor of IKBKE 1	1	DLQQENR	DLQQENR	2	DLQQENR2			64039.1
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	DLQQQLADADR	DLQQQLADADR	2	DLQQQLADADR2	29784.1	26422.4	26964.9
B2GV14	B2GV14	B2GV14_RAT	Txlna	Taxilin alpha	1	DLQQQLVDAK	DLQQQLVDAK	2	DLQQQLVDAK2	2492.16	6087.75	8722.88
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	DLQQSIAR	DLQQSIAR	2	DLQQSIAR2	57135.8	47698.2	60367.7
Q4KM74	Q4KM74	SC22B_RAT	Sec22b	Vesicle-trafficking protein SEC22b	1	DLQQYQSQAK	DLQQYQSQAK	2	DLQQYQSQAK2	158944	143386	175179
Q9Z1K9	Q9Z1K9	ADA17_RAT	Adam17	Disintegrin and metalloproteinase domain-containing protein 17	1	DLQSATHLETLLTFSALK	DLQSATHLETLLTFSALK	4	DLQSATHLETLLTFSALK4	13854.3	8064.85	7104.25
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	DLQSISQK	DLQSISQK	2	DLQSISQK2	42848.8	42552.4	51132.2
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	DLQSNVMHLTEK	DLQSNVMHLTEK	2	DLQSNVMHLTEK2	5156.2	7158.45	4371.21
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	DLQSNVMHLTEK	DLQSNVMHLTEK	3	DLQSNVMHLTEK3	38692.8	29235.4	28895.4
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	DLQSSNQLSNHISSLFR	DLQSSNQLSNHISSLFR	2	DLQSSNQLSNHISSLFR2	3285.28	1399.34	3709.49
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	DLQSSNQLSNHISSLFR	DLQSSNQLSNHISSLFR	3	DLQSSNQLSNHISSLFR3	121274	126639	110643
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	DLQSVQNLLK	DLQSVQNLLK	2	DLQSVQNLLK2	19987.1	26076.5	25661.4
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	DLQSYIYTITFASTR	DLQSYIYTITFASTR	3	DLQSYIYTITFASTR3	4379.28	4024.55	
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	DLQTQLDLK	DLQTQLDLK	2	DLQTQLDLK2	8176.73	4959.65	4949.2
P47858	P47858	PFKAM_RAT	Pfkm	ATP-dependent 6-phosphofructokinase, muscle type	1	DLQVNVEHLVQK	DLQVNVEHLVQK	3	DLQVNVEHLVQK3	13393	7593.72	
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	DLQVPDLHIPEFQLPHLSCTTEIPAFGK	DLQVPDLHIPEFQLPHLSC(UniMod:4)TTEIPAFGK	4	DLQVPDLHIPEFQLPHLSC(UniMod:4)TTEIPAFGK4	911711	1.71634e+06	1.22628e+06
Q6P6V6	Q6P6V6	GP108_RAT	Gpr108	Protein GPR108	1	DLQVQVR	DLQVQVR	2	DLQVQVR2	39054.6	35295.1	35790.5
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	DLQYITISK	DLQYITISK	2	DLQYITISK2	17176.7	20527.1	23303.7
Q62609	Q62609	NOE1_RAT	Olfm1	Noelin	1	DLQYVEK	DLQYVEK	2	DLQYVEK2	17780.8	10160.4	13403
Q64232	Q64232	TECR_RAT	Tecr	Very-long-chain enoyl-CoA reductase	1	DLRPAGSK	DLRPAGSK	2	DLRPAGSK2			49326.7
Q9JIX3	Q9JIX3	FHIT_RAT	Fhit	Bis(5'-adenosyl)-triphosphatase	1	DLRPDEVADLFQVTQR	DLRPDEVADLFQVTQR	3	DLRPDEVADLFQVTQR3	39970.9	30971.6	34217.4
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	DLRPGTLYSLTLYGLR	DLRPGTLYSLTLYGLR	2	DLRPGTLYSLTLYGLR2	29092	76496.6	49880.1
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	DLRPGTLYSLTLYGLR	DLRPGTLYSLTLYGLR	3	DLRPGTLYSLTLYGLR3	393604	414532	405580
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	DLSAYVVNNADDMDR	DLSAYVVNNADDMDR	2	DLSAYVVNNADDMDR2	14897.4	16111.8	25777.2
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	DLSDFHQSMAQWLAYSR	DLSDFHQSMAQWLAYSR	3	DLSDFHQSMAQWLAYSR3	42768.6	35707.6	42626.1
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	DLSDKLK	DLSDKLK	2	DLSDKLK2	25321	30664.8	40271.2
D3Z8E6	D3Z8E6	CAMP1_RAT	Camsap1	Calmodulin-regulated spectrin-associated protein 1	1	DLSDSQDVAFVQLHKPR	DLSDSQDVAFVQLHKPR	4	DLSDSQDVAFVQLHKPR4	3546.5	7231.9	
P10716	P10716	CLC4F_RAT	Clec4f	C-type lectin domain family 4 member F	1	DLSDVSALK	DLSDVSALK	2	DLSDVSALK2	21304.7	21098.9	19704.6
D3ZWS6	D3ZWS6	D3ZWS6_RAT	Naa30	N(alpha)-acetyltransferase 30, NatC catalytic subunit	1	DLSEPYSIYTYR	DLSEPYSIYTYR	2	DLSEPYSIYTYR2	8393.15	15375.9	3948.74
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	DLSFAAVSFYYK	DLSFAAVSFYYK	2	DLSFAAVSFYYK2	5540.73	10467.9	18168.9
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	DLSGLLVSAFK	DLSGLLVSAFK	2	DLSGLLVSAFK2	13337.3	12323.1	13917.1
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	DLSGPDAETLLK	DLSGPDAETLLK	2	DLSGPDAETLLK2	60708.8	58850.9	49808.3
P00697;Q05820	Q05820;P00697	LYSC1_RAT;LYSC2_RAT	Lyz1;Lyz2	Lysozyme C-1	0	DLSGYIR	DLSGYIR	2	DLSGYIR2	32998.5	26870.9	33394.5
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	DLSHILK	DLSHILK	1	DLSHILK1	6751.99	3575.69	6336.34
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	DLSHILK	DLSHILK	2	DLSHILK2	272793	189983	233848
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	DLSHILKK	DLSHILKK	2	DLSHILKK2	4647.76		
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	DLSHWTR	DLSHWTR	2	DLSHWTR2	50589.6	26467.4	36350.8
A0A0G2JYR4	A0A8I6AP41;A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	0	DLSKPIGALNPK	DLSKPIGALNPK	2	DLSKPIGALNPK2	15345.9	9868.39	11620
A0A0G2JYR4	A0A8I6AP41;A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	0	DLSKPIGALNPK	DLSKPIGALNPK	3	DLSKPIGALNPK3	39026.1	40164.6	36049.1
A0A8I5ZZR5	A0A8I5ZZR5	A0A8I5ZZR5_RAT	Nbeal1	Neurobeachin-like 1	1	DLSKPIGVVNEK	DLSKPIGVVNEK	3	DLSKPIGVVNEK3	8564.89	6105.44	7156.29
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	DLSKPIGVVNPK	DLSKPIGVVNPK	2	DLSKPIGVVNPK2	40178	47026.6	38392.8
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	DLSKPIGVVNPK	DLSKPIGVVNPK	3	DLSKPIGVVNPK3	259507	301702	254179
P13668	P21818;P13668	STMN1_RAT	Stmn1	Stathmin	0	DLSLEEIQK	DLSLEEIQK	2	DLSLEEIQK2	11356.4	15572.9	15349.5
D3ZD89	D3ZD89;M0RC73	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	0	DLSLLQIQMR	DLSLLQIQMR	2	DLSLLQIQMR2	41009.2	52503.8	27927.2
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	DLSLPPVDR	DLSLPPVDR	2	DLSLPPVDR2	11110.3		7382.22
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	DLSLSEGDVHTLGCGTAQCLQITCQVGR	DLSLSEGDVHTLGC(UniMod:4)GTAQC(UniMod:4)LQITC(UniMod:4)QVGR	4	DLSLSEGDVHTLGC(UniMod:4)GTAQC(UniMod:4)LQITC(UniMod:4)QVGR4	8102.99	7831.49	7596.74
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	DLSLSMK	DLSLSMK	1	DLSLSMK1	1250.04	931.889	2839.54
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	DLSLSMK	DLSLSMK	2	DLSLSMK2	367689	372213	262944
B2GUZ7	B2GUZ7	B2GUZ7_RAT	Tbcc	Tubulin folding cofactor C	1	DLSLVPER	DLSLVPER	2	DLSLVPER2	10065.1	4215.13	11245.8
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	DLSMSEEDQMMR	DLSMSEEDQMMR	2	DLSMSEEDQMMR2	18698.7	15875.9	22727
D3ZSN4	D3ZSN4	D3ZSN4_RAT	Zfp330	Zinc finger protein 330	1	DLSMSTR	DLSMSTR	2	DLSMSTR2	72425.2	80009.5	78535.9
P63144	P63144	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	1	DLSPIAER	DLSPIAER	2	DLSPIAER2	95876.8	83877.1	83788.1
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	DLSPTPESSGSFQEHTVDGENQIVFTHR	DLSPTPESSGSFQEHTVDGENQIVFTHR	4	DLSPTPESSGSFQEHTVDGENQIVFTHR4	24674.1	29222.5	16963.6
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	DLSQLTK	DLSQLTK	2	DLSQLTK2	91032.9	90703.3	132398
A0A0G2K7P4	A0A0G2K7P4	A0A0G2K7P4_RAT	RGD1560212	N-terminal amino-acid N(alpha)-acetyltransferase NatA	1	DLSQMADELRR	DLSQMADELRR	3	DLSQMADELRR3	12180	13322.2	13790.2
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	DLSQMLK	DLSQMLK	2	DLSQMLK2	81354.3	78084.3	77525.3
P02761	M0R8N5;A0A8I6ANP0;P02761;A0A096MJR3;A0A096MKC6;Q78E14	MUP_RAT		Major urinary protein	0	DLSSDIKEK	DLSSDIKEK	2	DLSSDIKEK2	32169.2	31354.9	28095.5
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	DLSSEEEIHHFK	DLSSEEEIHHFK	3	DLSSEEEIHHFK3	29372.9	13719.2	12513.1
D3ZI07	O55165;D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	0	DLSSFVTK	DLSSFVTK	2	DLSSFVTK2	37279.5	41062.1	49671.7
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	DLSSGTMVDIPALIK	DLSSGTMVDIPALIK	2	DLSSGTMVDIPALIK2	8719.77	7194.13	
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	DLSSPSQYDTGVALTGLSCFVTPDLAR	DLSSPSQYDTGVALTGLSC(UniMod:4)FVTPDLAR	3	DLSSPSQYDTGVALTGLSC(UniMod:4)FVTPDLAR3	25160.7	17226.3	30351.2
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	DLSSQLLK	DLSSQLLK	2	DLSSQLLK2	238683	218000	210104
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	DLSSSDLTTASK	DLSSSDLTTASK	2	DLSSSDLTTASK2	31447.9	26909.3	25203.7
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	DLSSSDLTTASK	DLSSSDLTTASK	3	DLSSSDLTTASK3	9688.83	4783.29	
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	DLSSSDLTTASKIVK	DLSSSDLTTASKIVK	3	DLSSSDLTTASKIVK3	3971.66	4032.92	6687.3
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	DLSSSEK	DLSSSEK	1	DLSSSEK1		1043.64	1438.49
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	DLSSSFR	DLSSSFR	2	DLSSSFR2	71526.4	89150	107807
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	DLSSTLWHAAIEINR	DLSSTLWHAAIEINR	2	DLSSTLWHAAIEINR2	26169.9	12207.4	14590.3
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	DLSSTLWHAAIEINR	DLSSTLWHAAIEINR	3	DLSSTLWHAAIEINR3	51164.2	63850.5	88465.1
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DLSSVQTLLTK	DLSSVQTLLTK	2	DLSSVQTLLTK2	295005	288316	331875
P49911	P49911	AN32A_RAT	Anp32a	Acidic leucine-rich nuclear phosphoprotein 32 family member A	1	DLSTIEPLK	DLSTIEPLK	2	DLSTIEPLK2	23071.4	25002.9	27066
P49911	P49911	AN32A_RAT	Anp32a	Acidic leucine-rich nuclear phosphoprotein 32 family member A	1	DLSTIEPLKK	DLSTIEPLKK	2	DLSTIEPLKK2	23764.2	14553.4	15257
P49911	P49911	AN32A_RAT	Anp32a	Acidic leucine-rich nuclear phosphoprotein 32 family member A	1	DLSTIEPLKK	DLSTIEPLKK	3	DLSTIEPLKK3	162361	167773	186267
Q63556	Q63556	SPA3M_RAT	Serpina3m	Serine protease inhibitor A3M (Fragment)	1	DLSVSQVVHK	DLSVSQVVHK	2	DLSVSQVVHK2	178064	161816	180801
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	DLSVSTGK	DLSVSTGK	1	DLSVSTGK1	23096.3	16966.3	16879.1
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	DLSVSTGK	DLSVSTGK	2	DLSVSTGK2	1.54248e+06	1.8093e+06	1.81829e+06
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	DLSVSTGKEEQDIR	DLSVSTGKEEQDIR	2	DLSVSTGKEEQDIR2	6949.3	8744.9	7264.65
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	DLSVSTGKEEQDIR	DLSVSTGKEEQDIR	3	DLSVSTGKEEQDIR3	132516	164687	164444
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	DLSWSMLR	DLSWSMLR	2	DLSWSMLR2	83113	88410.2	77902.3
Q794E4	Q794E4	HNRPF_RAT	Hnrnpf	Heterogeneous nuclear ribonucleoprotein F	1	DLSYCLSGMYDHR	DLSYC(UniMod:4)LSGMYDHR	2	DLSYC(UniMod:4)LSGMYDHR2	2972.08		4690.78
Q794E4	Q794E4	HNRPF_RAT	Hnrnpf	Heterogeneous nuclear ribonucleoprotein F	1	DLSYCLSGMYDHR	DLSYC(UniMod:4)LSGMYDHR	3	DLSYC(UniMod:4)LSGMYDHR3	14505.4	16424.9	8819.2
D4A7F0	D4A7F0	D4A7F0_RAT	Ubr3	E3 ubiquitin-protein ligase	1	DLTAGLGENTCAK	DLTAGLGENTC(UniMod:4)AK	2	DLTAGLGENTC(UniMod:4)AK2		5039.15	2795.44
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	DLTAQIQAFGK	DLTAQIQAFGK	2	DLTAQIQAFGK2	5784.52	6619.31	8273.17
B2GV06	B2GV06	SCOT1_RAT	Oxct1	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial	1	DLTAVSNNAGVDNFGLGLLLR	DLTAVSNNAGVDNFGLGLLLR	3	DLTAVSNNAGVDNFGLGLLLR3	17686.7	16387	11244.1
P68136	P60711;P63259;A0A8I5Y704;D3ZRN3;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	DLTDYLMK	DLTDYLMK	2	DLTDYLMK2	2.5975e+07	2.5014e+07	2.7678e+07
A0A8I6AS17	A0A8I6AS17	A0A8I6AS17_RAT	Bsdc1	BSD domain containing 1	1	DLTEFTQVVQHDTACTIAATASVVK	DLTEFTQVVQHDTAC(UniMod:4)TIAATASVVK	3	DLTEFTQVVQHDTAC(UniMod:4)TIAATASVVK3	4923.53	2724.06	3653.11
P16573	P16573	CEAM1_RAT	Ceacam1	Carcinoembryonic antigen-related cell adhesion molecule 1	1	DLTEHKPSTSSHNLGPSDDSPNK	DLTEHKPSTSSHNLGPSDDSPNK	3	DLTEHKPSTSSHNLGPSDDSPNK3	23650.8	17180.7	16864.1
P16573	P16573	CEAM1_RAT	Ceacam1	Carcinoembryonic antigen-related cell adhesion molecule 1	1	DLTEHKPSTSSHNLGPSDDSPNK	DLTEHKPSTSSHNLGPSDDSPNK	4	DLTEHKPSTSSHNLGPSDDSPNK4	258561	245181	273280
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	DLTEIQCDMSDVNSK	DLTEIQC(UniMod:4)DMSDVNSK	2	DLTEIQC(UniMod:4)DMSDVNSK2	3567.94	4780.99	8981.82
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	DLTELVQR	DLTELVQR	2	DLTELVQR2	171544	164861	193849
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	DLTFDGTFEHLYVATQTTLVK	DLTFDGTFEHLYVATQTTLVK	3	DLTFDGTFEHLYVATQTTLVK3	5825.86	3631.73	12330
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	DLTFYYLIK	DLTFYYLIK	2	DLTFYYLIK2	1.40718e+06	1.39857e+06	1.07051e+06
Q9JKC9	Q9JKC9	SYNRG_RAT	Synrg	Synergin gamma	1	DLTGEVEENER	DLTGEVEENER	2	DLTGEVEENER2	3953.53	2396.41	6121.97
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	DLTGQVSTPPVK	DLTGQVSTPPVK	2	DLTGQVSTPPVK2	9275.21	13090.5	7184.74
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DLTGVQNLR	DLTGVQNLR	2	DLTGVQNLR2	561534	599284	599596
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DLTGVQNLRK	DLTGVQNLRK	2	DLTGVQNLRK2	6392.45	4611.43	12271.1
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DLTGVQNLRK	DLTGVQNLRK	3	DLTGVQNLRK3	41303.2	79434.8	129308
F1LZB0	F1LZB0	F1LZB0_RAT	R3hcc1	R3H domain and coiled-coil containing 1	1	DLTHLVEIYDFKPTLK	DLTHLVEIYDFKPTLK	4	DLTHLVEIYDFKPTLK4	1993.49	1613.04	3678.42
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	DLTHSDSESSLHTSDR	DLTHSDSESSLHTSDR	2	DLTHSDSESSLHTSDR2	7704.39	6694.84	10078
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	DLTHSDSESSLHTSDR	DLTHSDSESSLHTSDR	3	DLTHSDSESSLHTSDR3	90172.4	94726.2	109779
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	DLTHSDSESSLHTSDR	DLTHSDSESSLHTSDR	4	DLTHSDSESSLHTSDR4	261831	246442	319032
P51792	P51792	CLCN3_RAT	Clcn3	H(+)/Cl(-) exchange transporter 3	1	DLTIAIESAR	DLTIAIESAR	2	DLTIAIESAR2	48327.2	38123.9	28418
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	DLTLEQAYSYTVENAK	DLTLEQAYSYTVENAK	2	DLTLEQAYSYTVENAK2	7418.95	5981.05	5114.05
P58751	P58751	RELN_RAT	Reln	Reelin	1	DLTLKPGYVLQFK	DLTLKPGYVLQFK	2	DLTLKPGYVLQFK2	39527.6	43606.9	41495.5
P58751	P58751	RELN_RAT	Reln	Reelin	1	DLTLKPGYVLQFK	DLTLKPGYVLQFK	3	DLTLKPGYVLQFK3	43197.9	69863.8	62480.8
Q62921	Q62921	HOIL1_RAT	Rbck1	RanBP-type and C3HC4-type zinc finger-containing protein 1	1	DLTLQPR	DLTLQPR	2	DLTLQPR2	12189.9	16076.9	
D4A6B3	D4A6B3	D4A6B3_RAT	Slamf6	SLAM family member 6	1	DLTNQPWTK	DLTNQPWTK	2	DLTNQPWTK2	63081.9	48637.6	63081.2
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DLTNVQNLQK	DLTNVQNLQK	2	DLTNVQNLQK2	285455	323369	311300
P43424	P43424	GALT_RAT	Galt	Galactose-1-phosphate uridylyltransferase	1	DLTPEQAAER	DLTPEQAAER	2	DLTPEQAAER2	6564.58	7236.16	6367.35
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	DLTQAWDLYYHVFR	DLTQAWDLYYHVFR	3	DLTQAWDLYYHVFR3	2286.9	4268.56	
Q9EPB1	Q9EPB1	DPP2_RAT	Dpp7	Dipeptidyl peptidase 2	1	DLTQLFGFAR	DLTQLFGFAR	2	DLTQLFGFAR2	19690.1	19510.6	16289.4
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	DLTSAGNLLK	DLTSAGNLLK	2	DLTSAGNLLK2	11916.6		
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	DLTSIQLLPSGEMDPNFISVR	DLTSIQLLPSGEMDPNFISVR	3	DLTSIQLLPSGEMDPNFISVR3	12530.7	13316	20126
P09650	P09650	MCPT1_RAT	Mcpt1	Mast cell protease 1	1	DLTSLSLHESESPS	DLTSLSLHESESPS	2	DLTSLSLHESESPS2	8188.93	9087.36	9185.6
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	DLTSQFLK	DLTSQFLK	2	DLTSQFLK2	55205.1	54370.5	48431.8
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	DLTSVLILQR	DLTSVLILQR	2	DLTSVLILQR2	87326.2	85266.9	93966.5
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	DLTSVMR	DLTSVMR	2	DLTSVMR2	326338	319803	299040
G3V6S0	Q9QWN8;G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	0	DLTSVNILLK	DLTSVNILLK	2	DLTSVNILLK2	396966	428954	357078
G3V6S0	Q9QWN8;G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	0	DLTSVNILLKK	DLTSVNILLKK	3	DLTSVNILLKK3	22026.4	31392.4	31470
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DLTSWVTEMK	DLTSWVTEMK	2	DLTSWVTEMK2	199037	217212	225146
P62718	P62718	RL18A_RAT	Rpl18a	Large ribosomal subunit protein eL20	1	DLTTAGAVTQCYR	DLTTAGAVTQC(UniMod:4)YR	2	DLTTAGAVTQC(UniMod:4)YR2	15803.8	10634.9	14233.6
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	DLTTFEEK	DLTTFEEK	2	DLTTFEEK2	29383.9	20884	24964.3
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	DLTTFLESQK	DLTTFLESQK	2	DLTTFLESQK2	38242.7	38979.3	33459.8
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	DLTTFLESQKK	DLTTFLESQKK	3	DLTTFLESQKK3	22287.1	27253.7	29776.6
F7FLB2	F7FLB2	F7FLB2_RAT	Pgm2	phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	1	DLTTGYDSNQPDK	DLTTGYDSNQPDK	2	DLTTGYDSNQPDK2	3698.22	5358.68	
F7FLB2	F7FLB2	F7FLB2_RAT	Pgm2	phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	1	DLTTGYDSNQPDKK	DLTTGYDSNQPDKK	3	DLTTGYDSNQPDKK3	5939.45	4564.36	1033.12
P05545	P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	1	DLTTPYIR	DLTTPYIR	2	DLTTPYIR2	192048	144101	174604
P05545	P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	1	DLTTPYIRDEELSCSVLELK	DLTTPYIRDEELSC(UniMod:4)SVLELK	3	DLTTPYIRDEELSC(UniMod:4)SVLELK3	1.24559e+06	1.12397e+06	1.1253e+06
A0A0G2JSK1	A0A0G2JSK1	A0A0G2JSK1_RAT	Serpina3c	Serine (or cysteine) proteinase inhibitor, clade A, member 3C	1	DLTTPYVRDEELSCSVLELK	DLTTPYVRDEELSC(UniMod:4)SVLELK	3	DLTTPYVRDEELSC(UniMod:4)SVLELK3		1.15722e+06	
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	DLVAIEAK	DLVAIEAK	1	DLVAIEAK1	10204.6	7462.53	12307.3
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	DLVAIEAK	DLVAIEAK	2	DLVAIEAK2	957118	884090	1.00998e+06
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	DLVASHHR	DLVASHHR	2	DLVASHHR2			5248.99
Q5U2R9	Q5U2R9	Q5U2R9_RAT	Scfd2	Sec1 family domain containing 2	1	DLVASLKPGTQVMVLSTR	DLVASLKPGTQVMVLSTR	3	DLVASLKPGTQVMVLSTR3	5654.67	4882.11	3251.24
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	DLVDTQYK	DLVDTQYK	2	DLVDTQYK2	13340.8	8309.24	15191.5
Q03346	Q03346	MPPB_RAT	Pmpcb	Mitochondrial-processing peptidase subunit beta	1	DLVDYITTHYK	DLVDYITTHYK	2	DLVDYITTHYK2	6483.37	9970.55	11601.8
Q03346	Q03346	MPPB_RAT	Pmpcb	Mitochondrial-processing peptidase subunit beta	1	DLVDYITTHYK	DLVDYITTHYK	3	DLVDYITTHYK3	17999.1	13276.1	30424.2
Q66H74	Q66H74	GLP3L_RAT	Golph3l	Golgi phosphoprotein 3-like	1	DLVELDPEVEGTK	DLVELDPEVEGTK	2	DLVELDPEVEGTK2	8107.03	9343.98	5351.3
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	DLVEMCR	DLVEMC(UniMod:4)R	2	DLVEMC(UniMod:4)R2	40536.1	29571.8	26861.5
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	DLVEMEQK	DLVEMEQK	2	DLVEMEQK2	23643.8	22794.9	17423.2
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	DLVEWLEK	DLVEWLEK	2	DLVEWLEK2	6801.25	6060.67	14626.2
F1LQ09	F1LQ09	F1LQ09_RAT	Atl2	Atlastin GTPase 2	1	DLVEYFK	DLVEYFK	2	DLVEYFK2	102556	96047.4	98602.1
P17164	P17164	FUCO_RAT	Fuca1	Tissue alpha-L-fucosidase	1	DLVGELGAAVR	DLVGELGAAVR	2	DLVGELGAAVR2	16429.1	19560.6	21267.3
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	DLVILLYETALLSSGFSLEDPQTHANR	DLVILLYETALLSSGFSLEDPQTHANR	4	DLVILLYETALLSSGFSLEDPQTHANR4		23161	21088.7
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	DLVIPDWNVSYQCQPQITQR	DLVIPDWNVSYQC(UniMod:4)QPQITQR	3	DLVIPDWNVSYQC(UniMod:4)QPQITQR3	1.21588e+06	1.51605e+06	1.27105e+06
A0A8I5ZNK2	A0A8I5ZNK2	A0A8I5ZNK2_RAT	Oxsr1	non-specific serine/threonine protein kinase	1	DLVIVAANLQK	DLVIVAANLQK	2	DLVIVAANLQK2	18155.4	25147.1	21647.2
A0A0G2JZH8	A0A0G2JZH8	A0A0G2JZH8_RAT	Pdhx	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	DLVKDDIK	DLVKDDIK	2	DLVKDDIK2	7002.5		4402.46
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	DLVKPGDENLR	DLVKPGDENLR	3	DLVKPGDENLR3	33469.4	42129.5	39198.6
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	DLVLKPR	DLVLKPR	2	DLVLKPR2	66615.1	78285	70365.2
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	DLVLLGEQFR	DLVLLGEQFR	2	DLVLLGEQFR2	124903	102985	102485
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	DLVLLGEQFREEYK	DLVLLGEQFREEYK	2	DLVLLGEQFREEYK2	9751.6	8107.34	3844.44
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	DLVLLGEQFREEYK	DLVLLGEQFREEYK	3	DLVLLGEQFREEYK3	55330.2	73565.3	80058.7
A0A0U1RS29	A0A0U1RS29	A0A0U1RS29_RAT	Rgl2	Ral guanine nucleotide dissociation stimulator-like 2	1	DLVMLDAASK	DLVMLDAASK	2	DLVMLDAASK2	12268.7	8021.92	9902.87
D3ZJR7	D3ZJR7	D3ZJR7_RAT	Dsc2	Desmocollin 2	1	DLVNSPNWR	DLVNSPNWR	2	DLVNSPNWR2	32280.9	22049.5	23214.4
P21913	P21913	SDHB_RAT	Sdhb	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial	1	DLVPDLSNFYAQYK	DLVPDLSNFYAQYK	2	DLVPDLSNFYAQYK2	86410.9	113256	97181.3
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	DLVPGDTVCLSVGDR	DLVPGDTVC(UniMod:4)LSVGDR	2	DLVPGDTVC(UniMod:4)LSVGDR2	84270.4	68586.9	59287.2
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	DLVPGDTVCLSVGDRVPADLR	DLVPGDTVC(UniMod:4)LSVGDRVPADLR	3	DLVPGDTVC(UniMod:4)LSVGDRVPADLR3	51344.1	55372.5	56493
Q80VJ4	Q80VJ4	GPCP1_RAT	Gpcpd1	Glycerophosphocholine phosphodiesterase GPCPD1	1	DLVPVVYHDLTCCLTMK	DLVPVVYHDLTC(UniMod:4)C(UniMod:4)LTMK	3	DLVPVVYHDLTC(UniMod:4)C(UniMod:4)LTMK3	24563.1	23646.7	15399.5
Q03555	Q03555	GEPH_RAT	Gphn	Gephyrin	1	DLVQDPSLLGGTISAYK	DLVQDPSLLGGTISAYK	2	DLVQDPSLLGGTISAYK2	5868.47	3684.11	6270.11
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	DLVQSAVWSR	DLVQSAVWSR	2	DLVQSAVWSR2	152200	141504	169541
A0A8I6ASK1	A0A8I6ASK1	A0A8I6ASK1_RAT	P4ha2	procollagen-proline 4-dioxygenase	1	DLVQSLK	DLVQSLK	2	DLVQSLK2	26559.7	28541.8	30416.6
Q9JLT6	Q9JLT6	BID_RAT	Bid	BH3-interacting domain death agonist	1	DLVRNEMD	DLVRNEMD	2	DLVRNEMD2	5227.02	2195.61	
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	DLVSIHTDGNEQLSVMR	DLVSIHTDGNEQLSVMR	3	DLVSIHTDGNEQLSVMR3	19187.4	28957.3	21481.2
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	DLVSSEALFHSHK	DLVSSEALFHSHK	3	DLVSSEALFHSHK3	30684.2	34376.5	37021.7
P54001	P54001	P4HA1_RAT	P4ha1	Prolyl 4-hydroxylase subunit alpha-1	1	DLVTSLK	DLVTSLK	2	DLVTSLK2	23449.8	24203.5	42926.6
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	DLVVTQCGNAIYR	DLVVTQC(UniMod:4)GNAIYR	2	DLVVTQC(UniMod:4)GNAIYR2	58007.3	71216.7	69592.7
D3ZL95	D3ZL95	D3ZL95_RAT	Usp40	ubiquitinyl hydrolase 1	1	DLVWDTTR	DLVWDTTR	2	DLVWDTTR2	5511.11	9344.36	7490
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	DLVWPTPPAVLQPFQDTCHILFSR	DLVWPTPPAVLQPFQDTC(UniMod:4)HILFSR	3	DLVWPTPPAVLQPFQDTC(UniMod:4)HILFSR3	9319.76	8612.13	5100.51
D4A3S0	D4A3S0	D4A3S0_RAT	Trappc6a	Trafficking protein particle complex subunit 6A	1	DLWAAMFQK	DLWAAMFQK	2	DLWAAMFQK2	2410.49		7951.03
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	DLWLHIR	DLWLHIR	2	DLWLHIR2	12659.5	16695.2	16838.6
F7EUH5	F7EUH5	F7EUH5_RAT	Plxdc2	Plexin domain containing 2	1	DLWVNIDQMEK	DLWVNIDQMEK	2	DLWVNIDQMEK2	273009	235659	250737
F7EUH5	F7EUH5	F7EUH5_RAT	Plxdc2	Plexin domain containing 2	1	DLWVNIDQMEKDK	DLWVNIDQMEKDK	2	DLWVNIDQMEKDK2	77816.4	81648.1	94796.8
F7EUH5	F7EUH5	F7EUH5_RAT	Plxdc2	Plexin domain containing 2	1	DLWVNIDQMEKDK	DLWVNIDQMEKDK	3	DLWVNIDQMEKDK3	242119	258656	300101
F7EUH5	F7EUH5	F7EUH5_RAT	Plxdc2	Plexin domain containing 2	1	DLWVNIDQMEKDKVK	DLWVNIDQMEKDKVK	3	DLWVNIDQMEKDKVK3	14030.3	14809.6	13400
F7EUH5	F7EUH5	F7EUH5_RAT	Plxdc2	Plexin domain containing 2	1	DLWVNIDQMEKDKVK	DLWVNIDQMEKDKVK	4	DLWVNIDQMEKDKVK4	5849.69	9076.36	12532.9
P63269	P63269;P68035;P62738	ACTH_RAT	Actg2	Actin, gamma-enteric smooth muscle	0	DLYANNVLSGGTTMYPGIADR	DLYANNVLSGGTTMYPGIADR	3	DLYANNVLSGGTTMYPGIADR3	192952	210112	216139
P68136	P68136	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	1	DLYANNVMSGGTTMYPGIADR	DLYANNVMSGGTTMYPGIADR	3	DLYANNVMSGGTTMYPGIADR3	15917.7	21848.9	25294.3
D3ZRN3	D3ZRN3	D3ZRN3_RAT	Actbl2	Actin, beta-like 2	1	DLYANTVLSGGSTMYPGIADR	DLYANTVLSGGSTMYPGIADR	3	DLYANTVLSGGSTMYPGIADR3	235890	189268	239284
P60711	P60711;P63259	ACTB_RAT	Actb	Actin, cytoplasmic 1	0	DLYANTVLSGGTTMYPGIADR	DLYANTVLSGGTTMYPGIADR	3	DLYANTVLSGGTTMYPGIADR3	138673	66307.8	230555
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	DLYHLNPNAEWVIK	DLYHLNPNAEWVIK	3	DLYHLNPNAEWVIK3	47308.9	46684.7	55170.8
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	DLYIDRPLPYLIGSK	DLYIDRPLPYLIGSK	3	DLYIDRPLPYLIGSK3	33067.6	34457.9	38499.1
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	DLYLENPEIK	DLYLENPEIK	2	DLYLENPEIK2	18993.3	26907.4	24717.4
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	DLYLLTGAVPSDHK	DLYLLTGAVPSDHK	2	DLYLLTGAVPSDHK2	234816	230731	225918
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	DLYLLTGAVPSDHK	DLYLLTGAVPSDHK	3	DLYLLTGAVPSDHK3	268367	313673	296238
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	DLYNQDDNHQELGSFHIR	DLYNQDDNHQELGSFHIR	4	DLYNQDDNHQELGSFHIR4	7664.54	8983.24	12357
A0A0G2K098	A0A0G2K098	A0A0G2K098_RAT	Mcc	MCC regulator of WNT signaling pathway	1	DLYPNLTEER	DLYPNLTEER	2	DLYPNLTEER2	3285.09		
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	DLYQQEK	DLYQQEK	2	DLYQQEK2		61425.3	
D4A5K6	D4A5K6	D4A5K6_RAT	Zmpste24	CAAX prenyl protease	1	DLYSALIK	DLYSALIK	2	DLYSALIK2	131437	112200	115771
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	DLYSGLIGPLIVCR	DLYSGLIGPLIVC(UniMod:4)R	2	DLYSGLIGPLIVC(UniMod:4)R2	569399	365197	361051
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	DLYSGLIGPLIVCR	DLYSGLIGPLIVC(UniMod:4)R	3	DLYSGLIGPLIVC(UniMod:4)R3	75727.6	50347.4	42874.2
A0A8I6A538	A0A8I6A538	A0A8I6A538_RAT	Nin	Ninein	1	DLYVENAQLLK	DLYVENAQLLK	2	DLYVENAQLLK2	4970.79		6363.56
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	DLYVNPNHQATLGQER	DLYVNPNHQATLGQER	3	DLYVNPNHQATLGQER3	53381	40174	43247.8
Q68FS8	Q68FS8	Q68FS8_RAT	Rtca	RNA 3'-terminal-phosphate cyclase (ATP)	1	DLYVSIQPVQEAR	DLYVSIQPVQEAR	2	DLYVSIQPVQEAR2	38594.7	35408.1	43558.4
P05544	P05544;P09005	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	DLYVSQVVHK	DLYVSQVVHK	2	DLYVSQVVHK2	919921	888192	809289
P05544	P05544;P09005	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	DLYVSQVVHK	DLYVSQVVHK	3	DLYVSQVVHK3	2.74185e+06	2.71849e+06	3.03834e+06
Q68FS8	Q68FS8	Q68FS8_RAT	Rtca	RNA 3'-terminal-phosphate cyclase (ATP)	1	DMAAAAVR	DMAAAAVR	2	DMAAAAVR2	57882.1	62692.1	59636.2
D3ZIT4	D3ZIT4	D3ZIT4_RAT	Anapc7	Anaphase promoting complex subunit 7	1	DMAAAGLHSNVR	DMAAAGLHSNVR	2	DMAAAGLHSNVR2	4419.49	2480.53	5361.96
D3ZIT4	D3ZIT4	D3ZIT4_RAT	Anapc7	Anaphase promoting complex subunit 7	1	DMAAAGLHSNVR	DMAAAGLHSNVR	3	DMAAAGLHSNVR3	12247.1	15321.4	22972.2
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	DMAAFNERPIIFALSNPTSK	DMAAFNERPIIFALSNPTSK	3	DMAAFNERPIIFALSNPTSK3	21073	11125.3	22793.8
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	DMAAGHLSEAWSR	DMAAGHLSEAWSR	3	DMAAGHLSEAWSR3	27164.3	23305.3	32009.1
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	DMAEEVAITR	DMAEEVAITR	2	DMAEEVAITR2	112937	120453	123869
D3Z916	D3Z916	D3Z916_RAT	Mindy3	Ubiquitin carboxyl-terminal hydrolase MINDY	1	DMALVAPEAPSEQAR	DMALVAPEAPSEQAR	2	DMALVAPEAPSEQAR2	12433	11624.1	9285.01
Q5EB73	Q5EB73	PGAP4_RAT	Pgap4	Post-GPI attachment to proteins factor 4	1	DMALYSLLR	DMALYSLLR	2	DMALYSLLR2	14774.6	10478.3	17877.2
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	DMAMDSCR	DMAMDSC(UniMod:4)R	2	DMAMDSC(UniMod:4)R2	41301.3	28636.3	33023.2
Q99NA5	Q99NA5	IDH3A_RAT	Idh3a	Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial	1	DMANPTALLLSAVMMLR	DMANPTALLLSAVMMLR	3	DMANPTALLLSAVMMLR3	6183.59		
O88767	O88767	PARK7_RAT	Park7	Parkinson disease protein 7 homolog	1	DMANQVK	DMANQVK	2	DMANQVK2	46398.4	75147.8	84532.2
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	DMAPLKPEGR	DMAPLKPEGR	2	DMAPLKPEGR2	26018.1	20302.1	20487.3
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	DMAPLPESEVALGK	DMAPLPESEVALGK	2	DMAPLPESEVALGK2	44781.6	50539.1	35864.9
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	DMAPLPESEVALGKDVVTLPETK	DMAPLPESEVALGKDVVTLPETK	3	DMAPLPESEVALGKDVVTLPETK3	8697.42	7717.25	8492.1
Q5RJS8	Q5RJS8	TPST2_RAT	Tpst2	Protein-tyrosine sulfotransferase 2	1	DMAQIAPMLAR	DMAQIAPMLAR	2	DMAQIAPMLAR2	113025	120449	134761
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	DMAQMNDLQAQLEESNKEK	DMAQMNDLQAQLEESNKEK	3	DMAQMNDLQAQLEESNKEK3	12396.8	13850.8	5341.06
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	DMCLSALK	DMC(UniMod:4)LSALK	1	DMC(UniMod:4)LSALK1	2071.12		
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	DMCLSALK	DMC(UniMod:4)LSALK	2	DMC(UniMod:4)LSALK2	131669	124578	140319
F1M7Y5	F1M7Y5	KPCI_RAT	Prkci	Protein kinase C iota type	1	DMCSFDNEQPFTMK	DMC(UniMod:4)SFDNEQPFTMK	2	DMC(UniMod:4)SFDNEQPFTMK2	2426.6	3706.79	3893.28
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DMDDEESWIK	DMDDEESWIK	2	DMDDEESWIK2	231774	222348	229110
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DMDDEESWIKEK	DMDDEESWIKEK	2	DMDDEESWIKEK2	7335.59	4399	11014.4
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DMDDEESWIKEK	DMDDEESWIKEK	3	DMDDEESWIKEK3	115023	126851	120349
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	DMDELKK	DMDELKK	2	DMDELKK2	40009.9	30101.5	30378
O88370	O88370	PI42C_RAT	Pip4k2c	Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma	1	DMDFLNK	DMDFLNK	2	DMDFLNK2	16420.8	18268.6	13771.7
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	DMDGFDEDSEPR	DMDGFDEDSEPR	2	DMDGFDEDSEPR2	21527.9	22597.8	27901.3
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	DMDGFDEDSEPRR	DMDGFDEDSEPRR	3	DMDGFDEDSEPRR3	157210	189222	147731
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	DMDGYVSGLEVR	DMDGYVSGLEVR	2	DMDGYVSGLEVR2	10551.7	9786.21	4260.13
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	DMDLIDVNEAFAPQFLAVQK	DMDLIDVNEAFAPQFLAVQK	3	DMDLIDVNEAFAPQFLAVQK3	21608		17190.1
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	DMDLWEQQEEER	DMDLWEQQEEER	2	DMDLWEQQEEER2	85675.1	93477.7	97326.5
Q02253	Q02253	MMSA_RAT	Aldh6a1	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial	1	DMDLYSYR	DMDLYSYR	2	DMDLYSYR2	37231.7	41052.3	23738.2
D4AAT7	D4AAT7	NNRD_RAT	Naxd	ATP-dependent (S)-NAD(P)H-hydrate dehydratase	1	DMDNLFQLVR	DMDNLFQLVR	2	DMDNLFQLVR2	4316.08	5279.34	4673.4
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	DMDSGEVFCVDSEGQR	DMDSGEVFC(UniMod:4)VDSEGQR	2	DMDSGEVFC(UniMod:4)VDSEGQR2	7871.31	7225.62	4176.55
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	DMDSVLR	DMDSVLR	2	DMDSVLR2	33739	47484.8	55211
Q9WVH8	Q9WVH8	FBLN5_RAT	Fbln5	Fibulin-5	1	DMDVVSGR	DMDVVSGR	1	DMDVVSGR1	11729.9		9533.12
Q9WVH8	Q9WVH8	FBLN5_RAT	Fbln5	Fibulin-5	1	DMDVVSGR	DMDVVSGR	2	DMDVVSGR2	2.43473e+06	2.43846e+06	2.49252e+06
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	DMEALLPLMNMVIYSIDK	DMEALLPLMNMVIYSIDK	3	DMEALLPLMNMVIYSIDK3	5263.29		
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	DMEDLLR	DMEDLLR	2	DMEDLLR2	29623.4	48683.2	14239.8
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	DMEGLVDTSVAK	DMEGLVDTSVAK	2	DMEGLVDTSVAK2	10117.4	5133.28	4834.77
Q68G38	Q68G38	TOR1A_RAT	Tor1a	Torsin-1A	1	DMEHALAVSVFNNK	DMEHALAVSVFNNK	3	DMEHALAVSVFNNK3	19264.7	16486.2	22358.3
A0A0G2QC40	D3ZY41;A0A8I6B298;A0A0G2QC40	A0A0G2QC40_RAT	Mkrn1	RING-type E3 ubiquitin transferase	0	DMELSFAVQR	DMELSFAVQR	2	DMELSFAVQR2	20167.3	20057.6	23603.2
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	DMETIGFAVYQVPR	DMETIGFAVYQVPR	2	DMETIGFAVYQVPR2	118078	119758	103422
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	DMETIGFAVYQVPR	DMETIGFAVYQVPR	3	DMETIGFAVYQVPR3	29624.2	31597.6	27150.2
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	DMEVLSQEIVR	DMEVLSQEIVR	2	DMEVLSQEIVR2	12728.7	12430.5	11662.8
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	DMEYQCIVDNCHSHPEVR	DMEYQC(UniMod:4)IVDNC(UniMod:4)HSHPEVR	3	DMEYQC(UniMod:4)IVDNC(UniMod:4)HSHPEVR3	13925.3	10137.1	16403.8
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	DMEYQCIVDNCHSHPEVR	DMEYQC(UniMod:4)IVDNC(UniMod:4)HSHPEVR	4	DMEYQC(UniMod:4)IVDNC(UniMod:4)HSHPEVR4	41969.7	63269.7	50084
Q5XIJ6	Q5XIJ6	BABA1_RAT	Babam1	BRISC and BRCA1-A complex member 1	1	DMFAFMGSLDTK	DMFAFMGSLDTK	2	DMFAFMGSLDTK2	13701.2	22405.8	16810.7
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	DMFCAGR	DMFC(UniMod:4)AGR	2	DMFC(UniMod:4)AGR2	390418	404891	338235
A0A8I6AC50	A0A8I6AC50	A0A8I6AC50_RAT	Ttc13	Tetratricopeptide repeat domain 13	1	DMFDIAVK	DMFDIAVK	2	DMFDIAVK2	4436.6	3952.76	1803.22
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	DMFLDSNFTDTESR	DMFLDSNFTDTESR	2	DMFLDSNFTDTESR2	15936.8	7845.98	
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DMFQETMEAMR	DMFQETMEAMR	2	DMFQETMEAMR2	3.5876e+06	3.91335e+06	4.06602e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DMFQETMEAMR	DMFQETMEAMR	3	DMFQETMEAMR3	19938.1	21529.3	16764.6
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	DMGDSVSEESNQALHVAMEK	DMGDSVSEESNQALHVAMEK	3	DMGDSVSEESNQALHVAMEK3	22425.8	17075.6	21156.5
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	DMGEDLECLCQIMR	DMGEDLEC(UniMod:4)LC(UniMod:4)QIMR	2	DMGEDLEC(UniMod:4)LC(UniMod:4)QIMR2	18492.4	32980.1	26521.6
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	DMGEDLECLCQIMR	DMGEDLEC(UniMod:4)LC(UniMod:4)QIMR	3	DMGEDLEC(UniMod:4)LC(UniMod:4)QIMR3	8624.94	10408.8	9321.13
O08774	O08774	RGS12_RAT	Rgs12	Regulator of G-protein signaling 12	1	DMGELIEGVR	DMGELIEGVR	2	DMGELIEGVR2	1654.93	5987.33	
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	DMGEMVTQGQTDAQYMFLR	DMGEMVTQGQTDAQYMFLR	3	DMGEMVTQGQTDAQYMFLR3	113357	131349	137311
Q68FX0	Q68FX0	IDH3B_RAT	Idh3B	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	DMGGYSTTTDFIK	DMGGYSTTTDFIK	2	DMGGYSTTTDFIK2	51840.2	44789.9	51787.6
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	DMGHLQVDYR	DMGHLQVDYR	3	DMGHLQVDYR3	11069	9527.3	11186.5
A0A8I6AJ06	A0A8I6AJ06	A0A8I6AJ06_RAT	Ubl7	Ubiquitin-like 7	1	DMGIQDDELSLR	DMGIQDDELSLR	2	DMGIQDDELSLR2	7189.26	3976.21	4821.37
G3V8L1	G3V8L1	G3V8L1_RAT	Pycard	PYD and CARD domain containing	1	DMGIQELAEQLQK	DMGIQELAEQLQK	2	DMGIQELAEQLQK2	7984.05	6833.91	5732.25
F1M943	F1M943	F1M943_RAT	Armc8	Armadillo repeat-containing protein 8	1	DMGIVDILHK	DMGIVDILHK	2	DMGIVDILHK2	10018.5	11113	7147.8
F1M943	F1M943	F1M943_RAT	Armc8	Armadillo repeat-containing protein 8	1	DMGIVDILHK	DMGIVDILHK	3	DMGIVDILHK3	7182.75	7606.23	12987.2
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	DMGLTAFTNLK	DMGLTAFTNLK	2	DMGLTAFTNLK2	6.01117e+06	4.14967e+06	4.34452e+06
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	DMGMTDAFNQGK	DMGMTDAFNQGK	2	DMGMTDAFNQGK2	217213	211268	267804
G3V8L0	G3V8L0	G3V8L0_RAT	Wdr24	GATOR complex protein WDR24	1	DMGPGLGSETR	DMGPGLGSETR	2	DMGPGLGSETR2	2852.78	8470.63	
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	DMGSCEIYPQTIQHNPNGR	DMGSC(UniMod:4)EIYPQTIQHNPNGR	3	DMGSC(UniMod:4)EIYPQTIQHNPNGR3	130361	150245	130422
A0A8I6ATM7	A0A8I6ATM7	A0A8I6ATM7_RAT	Gpn1	GPN-loop GTPase	1	DMGSIALDPGASTDGASPVLDPSDLILTR	DMGSIALDPGASTDGASPVLDPSDLILTR	3	DMGSIALDPGASTDGASPVLDPSDLILTR3	4418		
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	DMGTVVLGK	DMGTVVLGK	1	DMGTVVLGK1	6758.58	4620.65	
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	DMGTVVLGK	DMGTVVLGK	2	DMGTVVLGK2	284322	305609	284825
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	DMGYHVSMMADSTSR	DMGYHVSMMADSTSR	3	DMGYHVSMMADSTSR3	3387.33	2885.47	4712.23
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	DMHGDSEYNIMFGPDICGPGTK	DMHGDSEYNIMFGPDIC(UniMod:4)GPGTK	3	DMHGDSEYNIMFGPDIC(UniMod:4)GPGTK3	1.13089e+06	1.10735e+06	1.0954e+06
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	DMHGDSEYNIMFGPDICGPGTK	DMHGDSEYNIMFGPDIC(UniMod:4)GPGTK	4	DMHGDSEYNIMFGPDIC(UniMod:4)GPGTK4	6545.54	8075.07	3185.5
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	DMHGDSEYNIMFGPDICGPGTKK	DMHGDSEYNIMFGPDIC(UniMod:4)GPGTKK	3	DMHGDSEYNIMFGPDIC(UniMod:4)GPGTKK3	117790	150352	147544
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	DMHGDSEYNIMFGPDICGPGTKK	DMHGDSEYNIMFGPDIC(UniMod:4)GPGTKK	4	DMHGDSEYNIMFGPDIC(UniMod:4)GPGTKK4	497721	659773	767471
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	DMHLLSCLESLR	DMHLLSC(UniMod:4)LESLR	2	DMHLLSC(UniMod:4)LESLR2	46002.4	46335.7	30885.8
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	DMHLLSCLESLR	DMHLLSC(UniMod:4)LESLR	3	DMHLLSC(UniMod:4)LESLR3	112661	114491	104897
Q5M7T2	Q5M7T2	SPRY7_RAT	Spryd7	SPRY domain-containing protein 7	1	DMHSLVMR	DMHSLVMR	2	DMHSLVMR2	18966.7	21845.3	6817.03
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	DMIDLEANFEK	DMIDLEANFEK	2	DMIDLEANFEK2	37502.1	34930.1	34211.6
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	DMIHIADTK	DMIHIADTK	2	DMIHIADTK2	6736.5	5586.55	13932.3
D3ZEJ2	D3ZEJ2	D3ZEJ2_RAT	Mcur1	Mitochondrial calcium uniporter regulator 1	1	DMIILEK	DMIILEK	2	DMIILEK2	15832.3	15155.3	12723.8
P62845	P62845	RS15_RAT	Rps15	Small ribosomal subunit protein uS19	1	DMIILPEMVGSMVGVYNGK	DMIILPEMVGSMVGVYNGK	3	DMIILPEMVGSMVGVYNGK3	1156.5	3981.14	
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	DMILQFISR	DMILQFISR	2	DMILQFISR2	20563.1	37654.7	39277.1
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	DMILTHK	DMILTHK	2	DMILTHK2	46364.1	54714.4	43425.7
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	DMIPTEMQR	DMIPTEMQR	2	DMIPTEMQR2	118513	127064	126799
Q6XUX2	Q6XUX2	DUSTY_RAT	Dstyk	Dual serine/threonine and tyrosine protein kinase	1	DMIVETLNTMK	DMIVETLNTMK	2	DMIVETLNTMK2	9147.97	7396.43	6501.54
O08773	O08773	RGS14_RAT	Rgs14	Regulator of G-protein signaling 14	1	DMLAGICEK	DMLAGIC(UniMod:4)EK	2	DMLAGIC(UniMod:4)EK2	20824.5	24075.7	25578.4
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	DMLEASILDTYLGK	DMLEASILDTYLGK	2	DMLEASILDTYLGK2	72031.5	60768.4	80616.4
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	DMLEASILDTYLGK	DMLEASILDTYLGK	3	DMLEASILDTYLGK3	10592.7	11621.2	6008.31
A0A8I6GM04	A0A0G2K988;A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	0	DMLEQLLK	DMLEQLLK	2	DMLEQLLK2	233015	229506	236966
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	DMLLAEAFSLK	DMLLAEAFSLK	2	DMLLAEAFSLK2	13077.9	11098.2	12072.7
P19945	P19945	RLA0_RAT	Rplp0	Large ribosomal subunit protein uL10	1	DMLLANK	DMLLANK	1	DMLLANK1	1780.4	835.664	2144.77
P19945	P19945	RLA0_RAT	Rplp0	Large ribosomal subunit protein uL10	1	DMLLANK	DMLLANK	2	DMLLANK2	134391	125855	138446
P19945	P19945	RLA0_RAT	Rplp0	Large ribosomal subunit protein uL10	1	DMLLANKVPAAAR	DMLLANKVPAAAR	2	DMLLANKVPAAAR2	2046.66	2912.31	3038.25
P19945	P19945	RLA0_RAT	Rplp0	Large ribosomal subunit protein uL10	1	DMLLANKVPAAAR	DMLLANKVPAAAR	3	DMLLANKVPAAAR3	22884.6	35015.4	36561.7
A0A8I5Y0Y2	A0A8I5Y0Y2	A0A8I5Y0Y2_RAT	Ddi2	DNA damage inducible 1 homolog 2	1	DMLLANPHELSLLK	DMLLANPHELSLLK	3	DMLLANPHELSLLK3	6567.16	10883.2	6471.96
A0A8I5ZUE7	A0A8I5ZUE7	A0A8I5ZUE7_RAT	Zc3h7b	Zinc finger CCCH-type containing 7B	1	DMLLCPR	DMLLC(UniMod:4)PR	2	DMLLC(UniMod:4)PR2	9929.12	12234.9	10955.6
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	DMLLELEEQLAESQR	DMLLELEEQLAESQR	2	DMLLELEEQLAESQR2	13375.2	21941.5	14466.6
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	DMLLELEEQLAESQR	DMLLELEEQLAESQR	3	DMLLELEEQLAESQR3	49944.8	48668.8	40754.3
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	DMLPIAPEPR	DMLPIAPEPR	2	DMLPIAPEPR2	40470.8	35282.1	43209.6
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	DMLPSFLQK	DMLPSFLQK	2	DMLPSFLQK2	9217.26	8763.34	8067.85
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	DMLSQLNAK	DMLSQLNAK	2	DMLSQLNAK2	163720	209455	162442
F1LU27	F1LU27	F1LU27_RAT	Focad	Focadhesin	1	DMLTDEITK	DMLTDEITK	2	DMLTDEITK2	18856.6	10104.1	14760.2
P18297	D3ZT59;P18297	SPRE_RAT	Spr	Sepiapterin reductase	0	DMLYQVLAVEEPSVR	DMLYQVLAVEEPSVR	2	DMLYQVLAVEEPSVR2	3687.37	7587.13	2433.09
P18297	D3ZT59;P18297	SPRE_RAT	Spr	Sepiapterin reductase	0	DMLYQVLAVEEPSVR	DMLYQVLAVEEPSVR	3	DMLYQVLAVEEPSVR3		2888.75	2070.85
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	DMMLNIINSSITTK	DMMLNIINSSITTK	2	DMMLNIINSSITTK2	239429	200857	193525
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	DMMLNIINSSITTK	DMMLNIINSSITTK	3	DMMLNIINSSITTK3	17380.9	24159.6	20737
F7F9K9	F7F9K9	F7F9K9_RAT	Ndufb8	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial	1	DMMPGSYPR	DMMPGSYPR	2	DMMPGSYPR2	171086	184046	198197
Q9JKC9	Q9JKC9	SYNRG_RAT	Synrg	Synergin gamma	1	DMMPQTTEQK	DMMPQTTEQK	2	DMMPQTTEQK2	29664.1	27426.5	33795.8
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	DMMSDLTR	DMMSDLTR	2	DMMSDLTR2	21393.2	29178.1	27850.9
A0A0G2K6T9	A0A0G2K6T9	A0A0G2K6T9_RAT	Pcdh1	Protocadherin 1	1	DMNDNAPTIEIR	DMNDNAPTIEIR	2	DMNDNAPTIEIR2	26773.2	30560.1	38030.4
A0A0G2K8N6	A0A0G2K8N6	A0A0G2K8N6_RAT	Ankmy2	Ankyrin repeat and MYND domain containing 2	1	DMNEVLAMK	DMNEVLAMK	2	DMNEVLAMK2	9408.93	4073.26	
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	DMNQFGEGEQAK	DMNQFGEGEQAK	2	DMNQFGEGEQAK2	15925.4	9837.69	9052.41
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	DMNQGELFDCALLGDR	DMNQGELFDC(UniMod:4)ALLGDR	2	DMNQGELFDC(UniMod:4)ALLGDR2	4169.5		
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	DMNQILDAYENK	DMNQILDAYENK	2	DMNQILDAYENK2	17609	11125.3	19218.9
O70595	O70595	ABCB6_RAT	Abcb6	ATP-binding cassette sub-family B member 6	1	DMNTQENATR	DMNTQENATR	2	DMNTQENATR2	10651.6		5282.01
Q7TNZ6	Q7TNZ6	STRAA_RAT	Strada	STE20-related kinase adapter protein alpha	1	DMPATQMLLEK	DMPATQMLLEK	2	DMPATQMLLEK2	26108.5	39889.1	33766.1
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	DMPDPLLTR	DMPDPLLTR	2	DMPDPLLTR2		12606.3	
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	DMPETSFTR	DMPETSFTR	2	DMPETSFTR2	24106.9	26998	43658
P12007	P12007	IVD_RAT	Ivd	Isovaleryl-CoA dehydrogenase, mitochondrial	1	DMPGFSTSK	DMPGFSTSK	2	DMPGFSTSK2	32073.1	30258.8	36996.8
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	DMPHNALDK	DMPHNALDK	2	DMPHNALDK2	36873.7	29506.5	31364.2
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	DMPHNALDKK	DMPHNALDKK	2	DMPHNALDKK2		4408.76	3123.73
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	DMPHNALDKK	DMPHNALDKK	3	DMPHNALDKK3	34980.3	34454.6	32189.7
A0A0G2JUF2	A0A0G2JUF2	A0A0G2JUF2_RAT	Snx30	Sorting nexin family member 30	1	DMPHPLAGSSSEEAVGGDSTPSPDLLMAR	DMPHPLAGSSSEEAVGGDSTPSPDLLMAR	3	DMPHPLAGSSSEEAVGGDSTPSPDLLMAR3	10823		9135.2
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	DMPLNIFVK	DMPLNIFVK	2	DMPLNIFVK2	29870.4	35003.9	35796.2
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	DMPPAFIK	DMPPAFIK	2	DMPPAFIK2	430553	363763	305196
A0A8I6A4C2	A0A8I6A4C2	A0A8I6A4C2_RAT	Nxn	Nucleoredoxin	1	DMPWLALPYK	DMPWLALPYK	2	DMPWLALPYK2		2045.57	6351.44
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	DMPYQPFSK	DMPYQPFSK	2	DMPYQPFSK2	172445	164677	217986
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	DMQAVSCSVNSER	DMQAVSC(UniMod:4)SVNSER	2	DMQAVSC(UniMod:4)SVNSER2	33883.4	47115.7	37523.9
P23377	P23377	FURIN_RAT	Furin	Furin	1	DMQHLVVQTSK	DMQHLVVQTSK	3	DMQHLVVQTSK3	2548.2	2777.24	4841.25
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	DMQLHREDFEIIK	DMQLHREDFEIIK	3	DMQLHREDFEIIK3	29118.9	24268.3	33886.8
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	DMQLHREDFEIIK	DMQLHREDFEIIK	4	DMQLHREDFEIIK4	12313.2	15989.3	11938.2
Q64194	Q64194	LICH_RAT	Lipa	Lysosomal acid lipase/cholesteryl ester hydrolase	1	DMQLPTALWSGGK	DMQLPTALWSGGK	2	DMQLPTALWSGGK2	24453.4	22504.6	17367.1
F1LP44	F1LP44	F1LP44_RAT	Itgal	Integrin subunit alpha L	1	DMQPILRPSIHAVTK	DMQPILRPSIHAVTK	4	DMQPILRPSIHAVTK4	1560.99		
D3ZE26	D3ZE26	D3ZE26_RAT	Tmcc2	Transmembrane and coiled-coil domain family 2	1	DMQQGLK	DMQQGLK	2	DMQQGLK2	44422.1	28372.8	53730.5
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	DMSEEPFNIWGTWHSTLK	DMSEEPFNIWGTWHSTLK	3	DMSEEPFNIWGTWHSTLK3	93390.6	105524	110000
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	DMSEFENEGFFALHHR	DMSEFENEGFFALHHR	3	DMSEFENEGFFALHHR3	20714.3	18271.9	15234.6
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	DMSEFENEGFFALHHR	DMSEFENEGFFALHHR	4	DMSEFENEGFFALHHR4	27710.2	33873.5	24661.5
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	DMSFGEK	DMSFGEK	2	DMSFGEK2	68564.7	73184	75039.1
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	DMSGHYQNALYLGDVSER	DMSGHYQNALYLGDVSER	3	DMSGHYQNALYLGDVSER3	125561	144826	141692
A0A8I5Y9M9	A0A8I5Y9M9	A0A8I5Y9M9_RAT	Sri	Sorcin	1	DMSGTMGFSEFR	DMSGTMGFSEFR	2	DMSGTMGFSEFR2	50742.4	21872.1	24879.7
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	DMSIIQWK	DMSIIQWK	2	DMSIIQWK2	78393.7	98961.8	79976.4
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	DMSISNTTMDEFR	DMSISNTTMDEFR	2	DMSISNTTMDEFR2	13525.2	13893.5	10106.5
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	DMSMLEER	DMSMLEER	2	DMSMLEER2	124196	114673	131972
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	DMSNTSDLWQIK	DMSNTSDLWQIK	2	DMSNTSDLWQIK2		1876.32	3887.25
F1M3G7	F1M3G7	AKP13_RAT	Akap13	A-kinase anchor protein 13	1	DMTECSTPLPEDCSPTHSPR	DMTEC(UniMod:4)STPLPEDC(UniMod:4)SPTHSPR	3	DMTEC(UniMod:4)STPLPEDC(UniMod:4)SPTHSPR3	9321.9	3924	11800.5
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	DMTGKEDNYR	DMTGKEDNYR	3	DMTGKEDNYR3	2084.32		
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	DMTGKEDVYR	DMTGKEDVYR	2	DMTGKEDVYR2	1203.15	4139.63	785.033
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	DMTGKEDVYR	DMTGKEDVYR	3	DMTGKEDVYR3	15889.8	28962.6	18175.5
Q4KLH5	Q4KLH5	AGFG1_RAT	Agfg1	Arf-GAP domain and FG repeat-containing protein 1	1	DMTGLPHNR	DMTGLPHNR	2	DMTGLPHNR2	5674.33		
P07872	P07872	ACOX1_RAT	Acox1	Peroxisomal acyl-coenzyme A oxidase 1	1	DMTLGSVLGR	DMTLGSVLGR	2	DMTLGSVLGR2	8374.14		4628.7
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	DMTMFVTASK	DMTMFVTASK	2	DMTMFVTASK2	126933	122170	109323
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	DMTSEELDDILR	DMTSEELDDILR	2	DMTSEELDDILR2	93207	100827	98411.5
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	DMTSGYVCTCR	DMTSGYVC(UniMod:4)TC(UniMod:4)R	2	DMTSGYVC(UniMod:4)TC(UniMod:4)R2	9051.28	22027.4	13839.6
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	DMTTGIVENK	DMTTGIVENK	2	DMTTGIVENK2	118759	142160	116558
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	DMVAQCESNMNELQQLQNEK	DMVAQC(UniMod:4)ESNMNELQQLQNEK	3	DMVAQC(UniMod:4)ESNMNELQQLQNEK3	14093	17492.6	13390.4
A0A0G2QC40	A0A8I6B298;A0A0G2QC40	A0A0G2QC40_RAT	Mkrn1	RING-type E3 ubiquitin transferase	0	DMVCGICMEVVYEK	DMVC(UniMod:4)GIC(UniMod:4)MEVVYEK	2	DMVC(UniMod:4)GIC(UniMod:4)MEVVYEK2	2879.73		
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	DMVEVETQFK	DMVEVETQFK	2	DMVEVETQFK2	8939.02	9280.65	4776.88
E9PT29	E9PT29	E9PT29_RAT	Ddx17	DEAD box helicase 17	1	DMVGIAQTGSGK	DMVGIAQTGSGK	2	DMVGIAQTGSGK2	3978.13		
Q4V897	Q4V897	CC90B_RAT	Ccdc90b	Coiled-coil domain-containing protein 90B, mitochondrial	1	DMVILEK	DMVILEK	2	DMVILEK2	30489.6	22407.9	21819.7
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	DMVNAWFSER	DMVNAWFSER	2	DMVNAWFSER2	376067	293842	356149
Q499P8	Q499P8	RUSF1_RAT	Rusf1	RUS family member 1	1	DMVQAGPK	DMVQAGPK	2	DMVQAGPK2	39947.4	32027.9	21628.2
Q711G3	Q711G3	IAH1_RAT	Iah1	Isoamyl acetate-hydrolyzing esterase 1 homolog	1	DMVQYLR	DMVQYLR	2	DMVQYLR2	7938.01	12758.5	15118
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	DMVTQASPYLFEATGK	DMVTQASPYLFEATGK	2	DMVTQASPYLFEATGK2	24133.7	11953.7	17075.6
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	DMVTQASPYLFEATGK	DMVTQASPYLFEATGK	3	DMVTQASPYLFEATGK3	4765.41	2917.67	5820.9
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	DMVTYYLNLR	DMVTYYLNLR	2	DMVTYYLNLR2	219953	229824	213806
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	DMVTYYLNLR	DMVTYYLNLR	3	DMVTYYLNLR3	7221.27	8677.84	3520.04
Q63369	Q63369	NFKB1_RAT	Nfkb1	Nuclear factor NF-kappa-B p105 subunit	1	DMVVGFANLGILHVTK	DMVVGFANLGILHVTK	3	DMVVGFANLGILHVTK3	6221.84	6898.85	3815.2
Q5XI64	Q5XI64	ABHD6_RAT	Abhd6	Monoacylglycerol lipase ABHD6	1	DMWLSVVK	DMWLSVVK	2	DMWLSVVK2	23213.1	33098.9	35692.4
A0A8I5ZUE7	A0A8I5ZUE7	A0A8I5ZUE7_RAT	Zc3h7b	Zinc finger CCCH-type containing 7B	1	DMWTFMK	DMWTFMK	2	DMWTFMK2	6338.61	6767.97	4832.11
A0A8I5ZK89	A0A8I5ZK89	A0A8I5ZK89_RAT	Dock5	Dedicator of cytokinesis 5	1	DMWYNLGPHK	DMWYNLGPHK	3	DMWYNLGPHK3	1029.13		
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	DMYDQVLK	DMYDQVLK	2	DMYDQVLK2	12722.2	5264.97	8213.65
D4A748	D4A748	D4A748_RAT	Wdfy4	WDFY family member 4	1	DMYLFSLGSESPK	DMYLFSLGSESPK	2	DMYLFSLGSESPK2	3608.44		
D3ZL85	D3ZL85	D3ZL85_RAT	Hccs	Holocytochrome c-type synthase	1	DMYNIIR	DMYNIIR	2	DMYNIIR2		6340.12	11077.6
G3V8D4	G3V8D4	APOC2_RAT	Apoc2	Apolipoprotein C-II	1	DMYSKSSAAMTTYAGIFTDQLLTLLK	DMYSKSSAAMTTYAGIFTDQLLTLLK	4	DMYSKSSAAMTTYAGIFTDQLLTLLK4	4501.96	11260.9	4095.55
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	DMYVPNPSCR	DMYVPNPSC(UniMod:4)R	2	DMYVPNPSC(UniMod:4)R2	69139.7	71766.9	77538.4
P09117	P09117	ALDOC_RAT	Aldoc	Fructose-bisphosphate aldolase C	1	DNAGAATEEFIK	DNAGAATEEFIK	2	DNAGAATEEFIK2	10990.9	2486.71	6539.11
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	DNALLAQLIQDK	DNALLAQLIQDK	2	DNALLAQLIQDK2	96256.5	87193.3	90528.8
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	DNALLAQLIQDK	DNALLAQLIQDK	3	DNALLAQLIQDK3		3066.48	
Q66HC5	Q66HC5	NUP93_RAT	Nup93	Nuclear pore complex protein Nup93	1	DNALLSAIEESR	DNALLSAIEESR	2	DNALLSAIEESR2	13324.7	15604.1	8492.88
Q66HC5	Q66HC5	NUP93_RAT	Nup93	Nuclear pore complex protein Nup93	1	DNALLSAIEESRK	DNALLSAIEESRK	3	DNALLSAIEESRK3	5503.07	8945.23	
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	DNALTLLIK	DNALTLLIK	2	DNALTLLIK2	11192.6	12510.6	8536.6
Q63042	Q63042	ALR_RAT	Gfer	FAD-linked sulfhydryl oxidase ALR	1	DNAPAAAPAPK	DNAPAAAPAPK	2	DNAPAAAPAPK2	79264.1	88710.2	72511.1
A0A8I6ALW9	A0A8I6ALW9	A0A8I6ALW9_RAT	ENSRNOG00000065952	Ig-like domain-containing protein	1	DNAQNTLYLQMSK	DNAQNTLYLQMSK	2	DNAQNTLYLQMSK2	387113	365529	367606
A0A8I6ALW9	A0A8I6ALW9	A0A8I6ALW9_RAT	ENSRNOG00000065952	Ig-like domain-containing protein	1	DNAQNTLYLQMSK	DNAQNTLYLQMSK	3	DNAQNTLYLQMSK3	52594.9	56207.3	54638.7
B5DEH0	B5DEH0	LIMD1_RAT	Limd1	LIM domain-containing protein 1	1	DNAQTGMTAGLDPK	DNAQTGMTAGLDPK	2	DNAQTGMTAGLDPK2	33844.9	33016	32200.5
D4A748	D4A748	D4A748_RAT	Wdfy4	WDFY family member 4	1	DNATPVFLLR	DNATPVFLLR	2	DNATPVFLLR2	4615.66		2427.04
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	DNAVEIFLTNGR	DNAVEIFLTNGR	2	DNAVEIFLTNGR2	7472.27	3331.52	5641.36
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	DNAVITPSSSSR	DNAVITPSSSSR	2	DNAVITPSSSSR2	11045.7	13825.5	11476.1
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	DNCCILDER	DNC(UniMod:4)C(UniMod:4)ILDER	2	DNC(UniMod:4)C(UniMod:4)ILDER2	102285	91960.4	83508
P02770	P02770	ALBU_RAT	Alb	Albumin	1	DNCFATEGPNLVAR	DNC(UniMod:4)FATEGPNLVAR	2	DNC(UniMod:4)FATEGPNLVAR2	197549	89990.7	140452
P02770	P02770	ALBU_RAT	Alb	Albumin	1	DNCFATEGPNLVAR	DNC(UniMod:4)FATEGPNLVAR	3	DNC(UniMod:4)FATEGPNLVAR3	13782.8		11374.4
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	DNCPFHYNPAQYDYDR	DNC(UniMod:4)PFHYNPAQYDYDR	3	DNC(UniMod:4)PFHYNPAQYDYDR3	20252.6		13018.5
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	DNCPFHYNPAQYDYDRDDVGDR	DNC(UniMod:4)PFHYNPAQYDYDRDDVGDR	3	DNC(UniMod:4)PFHYNPAQYDYDRDDVGDR3	9623.73	8296.92	5747.87
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	DNCPFHYNPAQYDYDRDDVGDR	DNC(UniMod:4)PFHYNPAQYDYDRDDVGDR	4	DNC(UniMod:4)PFHYNPAQYDYDRDDVGDR4	137083	87091	133503
D4A2G6	D4A2G6	D4A2G6_RAT	Thbs2	Thrombospondin 2	1	DNCPLLFNPR	DNC(UniMod:4)PLLFNPR	2	DNC(UniMod:4)PLLFNPR2	14712	9517.5	8341.98
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	DNCPNLPNSGQEDYDK	DNC(UniMod:4)PNLPNSGQEDYDK	2	DNC(UniMod:4)PNLPNSGQEDYDK2	234633	134782	177238
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	DNCPNLPNSGQEDYDK	DNC(UniMod:4)PNLPNSGQEDYDK	3	DNC(UniMod:4)PNLPNSGQEDYDK3	29863.5	20393.3	23536.2
G3V686	G3V686	RETNG_RAT	Retnlg	Resistin-like gamma	1	DNCPSTVTK	DNC(UniMod:4)PSTVTK	2	DNC(UniMod:4)PSTVTK2	8858.96		
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	DNCPTVPNSAQQDSDHDGK	DNC(UniMod:4)PTVPNSAQQDSDHDGK	3	DNC(UniMod:4)PTVPNSAQQDSDHDGK3	1.02744e+06	894364	1.06346e+06
D4A2G6	D4A2G6	D4A2G6_RAT	Thbs2	Thrombospondin 2	1	DNCPYVYNTDQR	DNC(UniMod:4)PYVYNTDQR	2	DNC(UniMod:4)PYVYNTDQR2	8249.88		2321.97
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	DNCQYVYNVDQR	DNC(UniMod:4)QYVYNVDQR	2	DNC(UniMod:4)QYVYNVDQR2	70226.4	56114.6	71735
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	DNCQYVYNVDQR	DNC(UniMod:4)QYVYNVDQR	3	DNC(UniMod:4)QYVYNVDQR3	2.87616e+06	3.06072e+06	3.58729e+06
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	DNCVFIPDK	DNC(UniMod:4)VFIPDK	2	DNC(UniMod:4)VFIPDK2	26736.2	10313.9	25496
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	DNCVTVPNSGQEDVDR	DNC(UniMod:4)VTVPNSGQEDVDR	2	DNC(UniMod:4)VTVPNSGQEDVDR2	34188.4	29861.8	28366.6
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	DNDFINEGQK	DNDFINEGQK	2	DNDFINEGQK2	158843	198368	150482
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	DNDFIYHDR	DNDFIYHDR	3	DNDFIYHDR3	4765.6	4024.36	568.428
O88377	O88377	PI42B_RAT	Pip4k2b	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta	1	DNDFLNEGQK	DNDFLNEGQK	2	DNDFLNEGQK2	60561.7	59429.7	59388.8
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	DNDGWVTTDPR	DNDGWVTTDPR	2	DNDGWVTTDPR2	49507.7	42986.8	41075
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	DNDGWVTTDPR	DNDGWVTTDPR	3	DNDGWVTTDPR3	11698.1	16239.5	7545.46
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	DNDHFNAMTSLSSK	DNDHFNAMTSLSSK	3	DNDHFNAMTSLSSK3	10067.1	12824.6	14693.3
D4A8F2	D4A8F2	D4A8F2_RAT	Rsu1	Ras suppressor protein 1	1	DNDLISLPK	DNDLISLPK	2	DNDLISLPK2	460731	410594	468189
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	DNDPDVDLFAGTK	DNDPDVDLFAGTK	2	DNDPDVDLFAGTK2	13240.7	5595.03	11272.1
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	DNDPPIAVAK	DNDPPIAVAK	2	DNDPPIAVAK2	473337	420829	468734
Q6IN36	Q6IN36	WIPF1_RAT	Wipf1	WAS/WASL-interacting protein family member 1	1	DNDSGGSRPPILPPGGR	DNDSGGSRPPILPPGGR	3	DNDSGGSRPPILPPGGR3	8562.24	10054.5	8644.84
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	DNDSLAAR	DNDSLAAR	2	DNDSLAAR2	46458.1		55408.8
Q9R064	Q9R064	GORS2_RAT	Gorasp2	Golgi reassembly-stacking protein 2	1	DNDTLKDLLK	DNDTLKDLLK	3	DNDTLKDLLK3	7310.28	4640.71	3592.71
B1H264	B1H264	B1H264_RAT	Tbc1d17	TBC1 domain family, member 17	1	DNDVLLHWAPVEEAGDPTQIFFSK	DNDVLLHWAPVEEAGDPTQIFFSK	3	DNDVLLHWAPVEEAGDPTQIFFSK3	4583.89	5058.63	6744.75
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	DNEDFQESNR	DNEDFQESNR	2	DNEDFQESNR2	144399	90116.5	80553
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	DNEDYDPQTVR	DNEDYDPQTVR	2	DNEDYDPQTVR2	37987.4	49968.3	47644.5
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	DNEEFIESNK	DNEEFIESNK	2	DNEEFIESNK2	1.25611e+06	829047	757900
F1LQP9	F1LQP9;D3ZER6	F1LQP9_RAT	Tnpo1	Transportin 1	0	DNEEKDSAFR	DNEEKDSAFR	2	DNEEKDSAFR2	1142.13		1458.08
F1LQP9	F1LQP9;D3ZER6	F1LQP9_RAT	Tnpo1	Transportin 1	0	DNEEKDSAFR	DNEEKDSAFR	3	DNEEKDSAFR3	4189.17	3794.27	
A0A8I5ZQE4	A0A8I5ZQE4	A0A8I5ZQE4_RAT	Supt5h	Transcription elongation factor SPT5	1	DNELIGQTVR	DNELIGQTVR	2	DNELIGQTVR2		4012.55	6586.8
P23680	P23680	SAMP_RAT	Apcs	Serum amyloid P-component	1	DNELLIYK	DNELLIYK	2	DNELLIYK2	30787.8	30196.2	26563.3
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	DNENVINEYSSILEDQK	DNENVINEYSSILEDQK	3	DNENVINEYSSILEDQK3	46803.5	2.72342e+06	2.99712e+06
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	DNEQTIGFYTK	DNEQTIGFYTK	2	DNEQTIGFYTK2	8063.69	4617.92	5921.01
P37136	P37136	ACES_RAT	Ache	Acetylcholinesterase	1	DNESLISR	DNESLISR	2	DNESLISR2	35871.1	31527.5	41643.1
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	DNESTISFYTR	DNESTISFYTR	2	DNESTISFYTR2	5646.73	6254.08	5445.23
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	DNETLSELK	DNETLSELK	2	DNETLSELK2	64884.5	67084.6	52450.7
F1M3G7	F1M3G7	AKP13_RAT	Akap13	A-kinase anchor protein 13	1	DNEVEQEDLTQSLSLVK	DNEVEQEDLTQSLSLVK	2	DNEVEQEDLTQSLSLVK2			4659.58
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	DNEVMDTFQIECLK	DNEVMDTFQIEC(UniMod:4)LK	2	DNEVMDTFQIEC(UniMod:4)LK2	2.87891e+06	3.06695e+06	2.95862e+06
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	DNEVMDTFQIECLK	DNEVMDTFQIEC(UniMod:4)LK	3	DNEVMDTFQIEC(UniMod:4)LK3	214659	253871	256714
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	DNEYVEK	DNEYVEK	2	DNEYVEK2	90225.1	89902.5	80000.5
P83888	P83888	TBG1_RAT	Tubg1	Tubulin gamma-1 chain	1	DNFDEMDTSR	DNFDEMDTSR	2	DNFDEMDTSR2	7054.72	2376.53	2389.19
A0A0G2JVT8	A0A8I6ARY9;A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	0	DNFDTTYIK	DNFDTTYIK	2	DNFDTTYIK2	8745.74	7183.08	3572.13
Q5PQL7	Q5PQL7	ITM2C_RAT	Itm2c	Integral membrane protein 2C	1	DNFFHCGVLYEDSLSSQIR	DNFFHC(UniMod:4)GVLYEDSLSSQIR	3	DNFFHC(UniMod:4)GVLYEDSLSSQIR3	5126.19	3118.51	5759.31
Q4V7F2	Q4V7F2	CREL1_RAT	Creld1	Protein disulfide isomerase Creld1	1	DNFGGGNTAWEEEK	DNFGGGNTAWEEEK	2	DNFGGGNTAWEEEK2	12242.6	14674.4	10813.5
F7FPK8	F7FPK8	F7FPK8_RAT	Lman2	Lectin, mannose-binding 2	1	DNFHGLAVFLDTYPNDETTER	DNFHGLAVFLDTYPNDETTER	3	DNFHGLAVFLDTYPNDETTER3	47966.7	51509.3	50940
P35284	P35284	RAB12_RAT	Rab12	Ras-related protein Rab-12	1	DNFNVDEIFLK	DNFNVDEIFLK	2	DNFNVDEIFLK2	12149.7	12268.9	16312.8
B2GV55	B2GV55;A0A8I6AE35	B2GV55_RAT	Ube2q1	Ubiquitin conjugating enzyme E2 Q1	0	DNFPFDPPFVR	DNFPFDPPFVR	2	DNFPFDPPFVR2	62602.4	73926.2	76905.5
P47942	P47942	DPYL2_RAT	Dpysl2	Dihydropyrimidinase-related protein 2	1	DNFTLIPEGTNGTEER	DNFTLIPEGTNGTEER	2	DNFTLIPEGTNGTEER2	8208.33	9113.07	11567.8
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	DNFWEMGDTGPCGPCSEIHYDR	DNFWEMGDTGPC(UniMod:4)GPC(UniMod:4)SEIHYDR	3	DNFWEMGDTGPC(UniMod:4)GPC(UniMod:4)SEIHYDR3	2365.62	6043.78	4693.15
Q5M7U6	Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	1	DNFWMTR	DNFWMTR	2	DNFWMTR2	54631.6	47467.5	46324.1
Q9JLZ1	Q9JLZ1	GLRX3_RAT	Glrx3	Glutaredoxin-3	1	DNGELLPILK	DNGELLPILK	2	DNGELLPILK2	21437.7	11125.8	16241.9
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	DNGGVTIADMDHVER	DNGGVTIADMDHVER	3	DNGGVTIADMDHVER3	24793.6	24118.1	18972.8
F1M332	F1M332	F1M332_RAT	Arhgap28	Rho GTPase activating protein 28	1	DNGIFGVPLTVLLDNDRK	DNGIFGVPLTVLLDNDRK	3	DNGIFGVPLTVLLDNDRK3	13711.5	12166.8	13063.2
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	DNGIRPSSLEQMAK	DNGIRPSSLEQMAK	2	DNGIRPSSLEQMAK2	8456.29	6756.66	6815.04
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	DNGIRPSSLEQMAK	DNGIRPSSLEQMAK	3	DNGIRPSSLEQMAK3	111792	97875.1	173253
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	DNGNGTYSCSYVPR	DNGNGTYSC(UniMod:4)SYVPR	2	DNGNGTYSC(UniMod:4)SYVPR2	334877	322529	326627
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	DNGNGTYSCSYVPR	DNGNGTYSC(UniMod:4)SYVPR	3	DNGNGTYSC(UniMod:4)SYVPR3	19829.6	18935.7	24599.9
M0RB63	M0RB63	M0RB63_RAT	Ndufa3-ps3	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3	1	DNGNMPDVPSHPQEPLGPSLEWIK	DNGNMPDVPSHPQEPLGPSLEWIK	3	DNGNMPDVPSHPQEPLGPSLEWIK3			17748.2
A0A8I6AGS3	A0A8I6AGS3	A0A8I6AGS3_RAT	Ndufa3	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3	1	DNGNMPDVPSHPQEPLGPSLEWLK	DNGNMPDVPSHPQEPLGPSLEWLK	3	DNGNMPDVPSHPQEPLGPSLEWLK3		23300.1	
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	DNHATLPADWK	DNHATLPADWK	2	DNHATLPADWK2	7106.26	7714	4062.54
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	DNHATLPADWK	DNHATLPADWK	3	DNHATLPADWK3	70679.7	47234.9	56565
A0A8I5ZV13	A0A8I5ZV13	A0A8I5ZV13_RAT	Mettl13	EEF1A lysine and N-terminal methyltransferase	1	DNHFAIFIIPQGR	DNHFAIFIIPQGR	3	DNHFAIFIIPQGR3	7576.96	1137.63	2872.19
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	DNHHLFGSTLLGIK	DNHHLFGSTLLGIK	3	DNHHLFGSTLLGIK3	12164.7	26685	27812.5
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	DNHHQGSHSDGAQVNGIQPEEISR	DNHHQGSHSDGAQVNGIQPEEISR	3	DNHHQGSHSDGAQVNGIQPEEISR3	11143	11296.2	4039.27
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	DNHHQGSHSDGAQVNGIQPEEISR	DNHHQGSHSDGAQVNGIQPEEISR	4	DNHHQGSHSDGAQVNGIQPEEISR4	73072	130661	70033.3
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	DNHKDCSGVSVHLTR	DNHKDC(UniMod:4)SGVSVHLTR	4	DNHKDC(UniMod:4)SGVSVHLTR4	4284.39	4708.19	3369.18
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	DNHLLGTFDLTGIPPAPR	DNHLLGTFDLTGIPPAPR	2	DNHLLGTFDLTGIPPAPR2	76499.1	62809.8	63834
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	DNHLLGTFDLTGIPPAPR	DNHLLGTFDLTGIPPAPR	3	DNHLLGTFDLTGIPPAPR3	1.14551e+06	1.18531e+06	1.39344e+06
A0A8I6A182	A0A8I6A182	A0A8I6A182_RAT	Pitpnc1	Phosphatidylinositol transfer protein, cytoplasmic 1	1	DNHQPIMCSYK	DNHQPIMC(UniMod:4)SYK	2	DNHQPIMC(UniMod:4)SYK2	2748.69	8251.08	2411.69
A0A8I6A182	A0A8I6A182	A0A8I6A182_RAT	Pitpnc1	Phosphatidylinositol transfer protein, cytoplasmic 1	1	DNHQPIMCSYK	DNHQPIMC(UniMod:4)SYK	3	DNHQPIMC(UniMod:4)SYK3	31097.7	20780.2	29740.6
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	DNHSPEVQHGSLLALGFTVGR	DNHSPEVQHGSLLALGFTVGR	4	DNHSPEVQHGSLLALGFTVGR4	4831.23		
Q05754	Q05754	DOPO_RAT	Dbh	Dopamine beta-hydroxylase	1	DNHYSPHFQEIR	DNHYSPHFQEIR	3	DNHYSPHFQEIR3	2549.68		4838.25
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	DNIACVILTFK	DNIAC(UniMod:4)VILTFK	2	DNIAC(UniMod:4)VILTFK2	52302.9	43537.5	51950.4
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	DNIACVILTFKEPFGTEGR	DNIAC(UniMod:4)VILTFKEPFGTEGR	3	DNIAC(UniMod:4)VILTFKEPFGTEGR3	31164.9	25292.4	30087.5
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	DNIASDSLLTTNMASESTVR	DNIASDSLLTTNMASESTVR	3	DNIASDSLLTTNMASESTVR3	22118.2	35619	30221.2
P36372	P36372	TAP2_RAT	Tap2	Antigen peptide transporter 2	1	DNIAYGLR	DNIAYGLR	2	DNIAYGLR2	110171	108360	80360.1
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	DNICGALAR	DNIC(UniMod:4)GALAR	2	DNIC(UniMod:4)GALAR2	14120.8	15594.6	8386.88
Q66HA6	D3ZPP2;Q66HA6	ARL8B_RAT	Arl8b	ADP-ribosylation factor-like protein 8B	0	DNIDITLQWLIQHSK	DNIDITLQWLIQHSK	3	DNIDITLQWLIQHSK3	15598.1	5508.72	6595.13
A0A8I6AGS4	A0A8I6AGS4	A0A8I6AGS4_RAT	Abi3bp	ABI family member 3 binding protein	1	DNIEGGIWSK	DNIEGGIWSK	2	DNIEGGIWSK2	8451.77	6134.88	4333.23
P02761	A0A8I6ANP0;M0R620;P02761;A0A096MJR3;Q78E14	MUP_RAT		Major urinary protein	0	DNIIDLTK	DNIIDLTK	1	DNIIDLTK1	4755.44	4832.13	5431.33
P02761	A0A8I6ANP0;M0R620;P02761;A0A096MJR3;Q78E14	MUP_RAT		Major urinary protein	0	DNIIDLTK	DNIIDLTK	2	DNIIDLTK2	443467	462186	470761
Q63632	G3V6N7;Q63632	S12A4_RAT	Slc12a4	Solute carrier family 12 member 4	0	DNIIPFLR	DNIIPFLR	2	DNIIPFLR2	28805.3	25212.9	24776.6
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	DNIPALVEEYLER	DNIPALVEEYLER	2	DNIPALVEEYLER2	18489.3	20173.3	20249.9
D3ZD73	D3ZD73;A0A8I6A3H5;A0A8I5Y7L2	D3ZD73_RAT	Ddx6	DEAD-box helicase 6	0	DNIQAMVIVPTR	DNIQAMVIVPTR	2	DNIQAMVIVPTR2	1349.97	487.036	3633.75
P62804	P62804	H4_RAT	H4c16	Histone H4	1	DNIQGITK	DNIQGITK	2	DNIQGITK2	81242.1	12282.3	
P62804	P62804	H4_RAT	H4c16	Histone H4	1	DNIQGITKPAIR	DNIQGITKPAIR	2	DNIQGITKPAIR2	4160.8	3054.71	3276.5
P62804	P62804	H4_RAT	H4c16	Histone H4	1	DNIQGITKPAIR	DNIQGITKPAIR	3	DNIQGITKPAIR3	48745.7	59088	54932.4
D3ZL95	D3ZL95	D3ZL95_RAT	Usp40	ubiquitinyl hydrolase 1	1	DNISCPHWFDINDSK	DNISC(UniMod:4)PHWFDINDSK	3	DNISC(UniMod:4)PHWFDINDSK3	8082.54	4275.9	3812.98
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	DNITNNTAAATVR	DNITNNTAAATVR	2	DNITNNTAAATVR2	1726.66	2522.03	3879.98
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	DNIVELLR	DNIVELLR	2	DNIVELLR2	15819.5	19714	12821
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	DNIYPAFQMFAK	DNIYPAFQMFAK	2	DNIYPAFQMFAK2	28076	33678.1	27579.9
Q5HZW7	Q5HZW7	PLET1_RAT	Plet1	Placenta-expressed transcript 1 protein	1	DNKPVGTWSGAYEK	DNKPVGTWSGAYEK	3	DNKPVGTWSGAYEK3	20849.9	21677.2	19574.4
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	DNLAENSEGK	DNLAENSEGK	2	DNLAENSEGK2	3.18995e+06	2.96018e+06	3.31577e+06
Q4QQV8	Q4QQV8	CHMP5_RAT	Chmp5	Charged multivesicular body protein 5	1	DNLAQQSFNMEQANYTIQSLK	DNLAQQSFNMEQANYTIQSLK	3	DNLAQQSFNMEQANYTIQSLK3	46353.8	44358.6	67324.4
Q4QQV8	Q4QQV8	CHMP5_RAT	Chmp5	Charged multivesicular body protein 5	1	DNLAQQSFNMEQANYTIQSLKDTK	DNLAQQSFNMEQANYTIQSLKDTK	3	DNLAQQSFNMEQANYTIQSLKDTK3	5930.75	5990.73	12318.6
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	DNLASTR	DNLASTR	2	DNLASTR2	42621.7	58145.7	
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	DNLEFFLTNLGK	DNLEFFLTNLGK	2	DNLEFFLTNLGK2	16620.7	13007.9	21632.8
A0A8I6ACK9	A0A8I6A0D0;A0A8I6ACK9;A0A8I5ZW97	A0A8I6ACK9_RAT	Abcg3l3	ATP-binding cassette, subfamily G (WHITE), member 3-like 3	0	DNLEFSAALR	DNLEFSAALR	2	DNLEFSAALR2	15881.1		10092.2
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	DNLEWLAR	DNLEWLAR	2	DNLEWLAR2	181959	193143	172227
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	DNLFEIITTSR	DNLFEIITTSR	2	DNLFEIITTSR2	91811.9	89073.3	98220.1
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	DNLFEIITTSR	DNLFEIITTSR	3	DNLFEIITTSR3	1030.77		4350.31
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	DNLGEAPMTPTEEASLPLAVTK	DNLGEAPMTPTEEASLPLAVTK	3	DNLGEAPMTPTEEASLPLAVTK3	59746.9	53069.4	70437.4
D4A5K6	D4A5K6	D4A5K6_RAT	Zmpste24	CAAX prenyl protease	1	DNLGFPVSDWLFSTWHYSHPPLLER	DNLGFPVSDWLFSTWHYSHPPLLER	4	DNLGFPVSDWLFSTWHYSHPPLLER4	19636.9	22052.7	15832
Q63060	Q63060	GLPK_RAT	Gk	Glycerol kinase	1	DNLGIIK	DNLGIIK	2	DNLGIIK2	27367.8	23787.6	16840.3
A0A8I5ZZR5	A0A8I5ZZR5	A0A8I5ZZR5_RAT	Nbeal1	Neurobeachin-like 1	1	DNLGVQHLQPSSDALLLEVVK	DNLGVQHLQPSSDALLLEVVK	3	DNLGVQHLQPSSDALLLEVVK3	1799.16	1548.38	
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	DNLIQMLSR	DNLIQMLSR	2	DNLIQMLSR2	279993	258187	308349
Q9QYW3	Q9QYW3	PHOCN_RAT	Mob4	MOB-like protein phocein	1	DNLIVPILEEEVQNSVSGESEA	DNLIVPILEEEVQNSVSGESEA	3	DNLIVPILEEEVQNSVSGESEA3	18598.5	19229.8	21293.9
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	DNLLLDMYLAPHVR	DNLLLDMYLAPHVR	2	DNLLLDMYLAPHVR2	33954.4	26799.6	21523.5
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	DNLLLDMYLAPHVR	DNLLLDMYLAPHVR	3	DNLLLDMYLAPHVR3	37867.5	38151	40085.1
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	DNLNDDGVDMK	DNLNDDGVDMK	2	DNLNDDGVDMK2	330964	301411	339370
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	DNLSESLR	DNLSESLR	2	DNLSESLR2	299792	279828	323727
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	DNLTLWTSDMQGDGEEQNK	DNLTLWTSDMQGDGEEQNK	3	DNLTLWTSDMQGDGEEQNK3	267987	232802	271357
P61983	P61983	1433G_RAT	Ywhag	14-3-3 protein gamma	1	DNLTLWTSDQQDDDGGEGNN	DNLTLWTSDQQDDDGGEGNN	3	DNLTLWTSDQQDDDGGEGNN3	18606.3	11915.1	12498.5
P63102	P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	1	DNLTLWTSDTQGDEAEAGEGGEN	DNLTLWTSDTQGDEAEAGEGGEN	3	DNLTLWTSDTQGDEAEAGEGGEN3	100290	74046.7	91475
P35213	P35213	1433B_RAT	Ywhab	14-3-3 protein beta/alpha	1	DNLTLWTSENQGDEGDAGEGEN	DNLTLWTSENQGDEGDAGEGEN	3	DNLTLWTSENQGDEGDAGEGEN3	9968.93		11222.5
D3ZP13	D3ZP13	D3ZP13_RAT	Qsox2	Sulfhydryl oxidase	1	DNLVDTYSVDQGSPGEWEGMGR	DNLVDTYSVDQGSPGEWEGMGR	3	DNLVDTYSVDQGSPGEWEGMGR3	8101.94	6060.01	6095.27
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	DNMALQR	DNMALQR	2	DNMALQR2	178496	141618	158877
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	DNMFSGLK	DNMFSGLK	2	DNMFSGLK2	86098.6	86985.7	70885.2
P35815	P35815	PPM1B_RAT	Ppm1b	Protein phosphatase 1B	1	DNMSIVLVCFANAPK	DNMSIVLVC(UniMod:4)FANAPK	2	DNMSIVLVC(UniMod:4)FANAPK2	12664.5	10651.3	9861.07
P35815	P35815	PPM1B_RAT	Ppm1b	Protein phosphatase 1B	1	DNMSIVLVCFANAPK	DNMSIVLVC(UniMod:4)FANAPK	3	DNMSIVLVC(UniMod:4)FANAPK3	3643.36	1578.18	
P20650	P20650	PPM1A_RAT	Ppm1a	Protein phosphatase 1A	1	DNMSVILICFPNAPK	DNMSVILIC(UniMod:4)FPNAPK	2	DNMSVILIC(UniMod:4)FPNAPK2	8884.65	6320.59	3458.59
A0A8I6AGL0	A0A8I6AGL0	A0A8I6AGL0_RAT	Ankrd44	Ankyrin repeat domain 44	1	DNMWLTPLHR	DNMWLTPLHR	3	DNMWLTPLHR3	6103.38	4314.18	4299.58
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	DNNGSFALCLLHEGK	DNNGSFALC(UniMod:4)LLHEGK	3	DNNGSFALC(UniMod:4)LLHEGK3	10190.3		
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	DNNGTALLEFDK	DNNGTALLEFDK	2	DNNGTALLEFDK2		5395.91	6281
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	DNNGTALLEFDKELSVFK	DNNGTALLEFDKELSVFK	3	DNNGTALLEFDKELSVFK3		1934.81	3505.75
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	DNNGTALLEFDKELSVFKDR	DNNGTALLEFDKELSVFKDR	4	DNNGTALLEFDKELSVFKDR4	10618.7	3574.29	2050.95
Q5U2N0	Q5U2N0	PYRG2_RAT	Ctps2	CTP synthase 2	1	DNNITTGK	DNNITTGK	1	DNNITTGK1	7098	1770.18	3984.89
Q5U2N0	Q5U2N0	PYRG2_RAT	Ctps2	CTP synthase 2	1	DNNITTGK	DNNITTGK	2	DNNITTGK2	325263	351894	309551
P14659	P14659;A0A8I6AQL9;P63018;M0RCB1	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	0	DNNLLGK	DNNLLGK	1	DNNLLGK1	85922.1	73629.2	68414.7
P14659	P14659;A0A8I6AQL9;P63018;M0RCB1	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	0	DNNLLGK	DNNLLGK	2	DNNLLGK2	941334	865419	952020
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	DNNLTTGK	DNNLTTGK	1	DNNLTTGK1	7098	1770.18	3984.89
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	DNNLTTGK	DNNLTTGK	2	DNNLTTGK2	325263	351894	309551
Q68FW9	Q68FW9	CSN3_RAT	Cops3	COP9 signalosome complex subunit 3	1	DNNMGLVK	DNNMGLVK	2	DNNMGLVK2	103784	130850	124997
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	DNNQFASASLDR	DNNQFASASLDR	2	DNNQFASASLDR2	61761.4	57915.4	66518.1
O35094	O35094	TIM44_RAT	Timm44	Mitochondrial import inner membrane translocase subunit TIM44	1	DNNVVFNR	DNNVVFNR	2	DNNVVFNR2	15156.8	15418.7	16499.2
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	DNPCVQGDCLITQTPPYYR	DNPC(UniMod:4)VQGDC(UniMod:4)LITQTPPYYR	3	DNPC(UniMod:4)VQGDC(UniMod:4)LITQTPPYYR3	531054	509143	614443
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	DNPDLGTAFVK	DNPDLGTAFVK	2	DNPDLGTAFVK2	49642.6	31624.1	25314.2
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	DNPEAAVHIFEGTHENPELIWNDSSR	DNPEAAVHIFEGTHENPELIWNDSSR	4	DNPEAAVHIFEGTHENPELIWNDSSR4	5938.23	2784.11	
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	DNPEATQQMNDLIIGK	DNPEATQQMNDLIIGK	2	DNPEATQQMNDLIIGK2	17173.6	22904	17667.6
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	DNPEEEYGYEDLK	DNPEEEYGYEDLK	2	DNPEEEYGYEDLK2	9561.59	6143.91	2469.82
Q3MID3	Q3MID3	ARFG2_RAT	Arfgap2	ADP-ribosylation factor GTPase-activating protein 2	1	DNPFSLGETFGSR	DNPFSLGETFGSR	2	DNPFSLGETFGSR2	6743.7	9266.25	11723
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	DNPGVVTCLDEAR	DNPGVVTC(UniMod:4)LDEAR	2	DNPGVVTC(UniMod:4)LDEAR2	124656	103351	89947.3
Q5RJR8	Q5RJR8	LRC59_RAT	Lrrc59	Leucine-rich repeat-containing protein 59	1	DNPLDPVLAK	DNPLDPVLAK	2	DNPLDPVLAK2	159087	151671	122210
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	DNPLGMK	DNPLGMK	2	DNPLGMK2	39269.1	44729.4	43657.2
D3ZYT8	D3ZYT8	D3ZYT8_RAT	Pikfyve	1-phosphatidylinositol-3-phosphate 5-kinase	1	DNPLYIR	DNPLYIR	2	DNPLYIR2	8776.3	7467.22	
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	DNPMVVPLCNR	DNPMVVPLC(UniMod:4)NR	2	DNPMVVPLC(UniMod:4)NR2	190159	195451	187959
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	DNPMYYCNK	DNPMYYC(UniMod:4)NK	2	DNPMYYC(UniMod:4)NK2	65989.3	85903.3	78216.7
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	DNPMYYCNKK	DNPMYYC(UniMod:4)NKK	2	DNPMYYC(UniMod:4)NKK2	7024.6		5803.69
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	DNPMYYCNKK	DNPMYYC(UniMod:4)NKK	3	DNPMYYC(UniMod:4)NKK3	18491.8	25020.5	20277.5
D3Z9Y3	D3Z9Y3	D3Z9Y3_RAT	Cerk	Ceramide kinase	1	DNPPCACPTSR	DNPPC(UniMod:4)AC(UniMod:4)PTSR	2	DNPPC(UniMod:4)AC(UniMod:4)PTSR2	24636.8	23277	33666.1
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	DNPSIFVHSPHALMLQDVK	DNPSIFVHSPHALMLQDVK	3	DNPSIFVHSPHALMLQDVK3	4278.68	4890.35	3795.08
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	DNPSIFVHSPHALMLQDVK	DNPSIFVHSPHALMLQDVK	4	DNPSIFVHSPHALMLQDVK4	7907.36	7349.79	3696.59
Q6AXP7	Q6AXP7	Q6AXP7_RAT	Paqr3	Progestin and adipoQ receptor family member 3	1	DNPYITDGYR	DNPYITDGYR	2	DNPYITDGYR2	3301.1		
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	DNQAIEFLFQLGR	DNQAIEFLFQLGR	2	DNQAIEFLFQLGR2		3194.08	
D4A5K6	D4A5K6	D4A5K6_RAT	Zmpste24	CAAX prenyl protease	1	DNQEEPGLEPR	DNQEEPGLEPR	2	DNQEEPGLEPR2	75510.4	69957.2	67822.4
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	DNQVGIWNSPPPQCIAR	DNQVGIWNSPPPQC(UniMod:4)IAR	2	DNQVGIWNSPPPQC(UniMod:4)IAR2	6932.82	5942.11	17255.8
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	DNQVGIWNSPPPQCIAR	DNQVGIWNSPPPQC(UniMod:4)IAR	3	DNQVGIWNSPPPQC(UniMod:4)IAR3	25554.5	14348.4	21293.3
D3ZMQ3	D3ZMQ3	D3ZMQ3_RAT	Itga4	Integrin subunit alpha 4	1	DNQWLGVTISR	DNQWLGVTISR	2	DNQWLGVTISR2		1745.86	5737.27
A0A8I6G6W8	A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	DNQWNPR	DNQWNPR	2	DNQWNPR2	17787.2	14119.5	12610.4
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	DNRGNLLQCVCTGNGR	DNRGNLLQC(UniMod:4)VC(UniMod:4)TGNGR	3	DNRGNLLQC(UniMod:4)VC(UniMod:4)TGNGR3	1400.11	1638.47	13899.5
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	DNRGNLLQCVCTGNGRGEWK	DNRGNLLQC(UniMod:4)VC(UniMod:4)TGNGRGEWK	4	DNRGNLLQC(UniMod:4)VC(UniMod:4)TGNGRGEWK4	5330.59	3665.35	
P01026	P01026	CO3_RAT	C3	Complement C3	1	DNRQPAPGHQTTLR	DNRQPAPGHQTTLR	3	DNRQPAPGHQTTLR3	55526.2	71797.3	74076.6
P01026	P01026	CO3_RAT	C3	Complement C3	1	DNRQPAPGHQTTLR	DNRQPAPGHQTTLR	4	DNRQPAPGHQTTLR4	329117	329621	400570
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	DNSALDPIIHGLK	DNSALDPIIHGLK	2	DNSALDPIIHGLK2	133041	157300	151484
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	DNSALDPIIHGLK	DNSALDPIIHGLK	3	DNSALDPIIHGLK3	85911.9	118208	110322
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	DNSCDQLCTK	DNSC(UniMod:4)DQLC(UniMod:4)TK	2	DNSC(UniMod:4)DQLC(UniMod:4)TK2	90554.7	61110	66079.6
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	DNSCVNPPHVPNATILTR	DNSC(UniMod:4)VNPPHVPNATILTR	3	DNSC(UniMod:4)VNPPHVPNATILTR3	44539.3	39537.7	47074.2
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	DNSDRPPLQEGALPQMLPGHSGPSGTNR	DNSDRPPLQEGALPQMLPGHSGPSGTNR	3	DNSDRPPLQEGALPQMLPGHSGPSGTNR3	893444	812502	845868
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	DNSDRPPLQEGALPQMLPGHSGPSGTNR	DNSDRPPLQEGALPQMLPGHSGPSGTNR	4	DNSDRPPLQEGALPQMLPGHSGPSGTNR4	3.49239e+06	3.77801e+06	4.02029e+06
B3EY83	B3EY83	LCN12_RAT	Lcn12	Epididymal-specific lipocalin-12	1	DNSEFQVTNSMTR	DNSEFQVTNSMTR	2	DNSEFQVTNSMTR2	4292.37	4172.46	5244.91
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	DNSGQIFSVVSNGK	DNSGQIFSVVSNGK	2	DNSGQIFSVVSNGK2	2.28476e+06	2.74335e+06	2.30991e+06
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	DNSGQIFSVVSNGK	DNSGQIFSVVSNGK	3	DNSGQIFSVVSNGK3	248238	288462	384468
A0A8I5ZSB0	A0A8I5ZSB0	A0A8I5ZSB0_RAT	Igtp	Interferon gamma induced GTPase	1	DNSILSVEVIK	DNSILSVEVIK	2	DNSILSVEVIK2	4138.12	2163.59	8334.17
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	DNSNIILLGDSQGDLR	DNSNIILLGDSQGDLR	2	DNSNIILLGDSQGDLR2	105599	100490	93147.9
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	DNSNIILLGDSQGDLR	DNSNIILLGDSQGDLR	3	DNSNIILLGDSQGDLR3	15198.4	7425.45	8407
P68182	P68182;P27791	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	0	DNSNLYMVMEYVPGGEMFSHLR	DNSNLYMVMEYVPGGEMFSHLR	3	DNSNLYMVMEYVPGGEMFSHLR3	71193	65525.7	72407.7
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	DNSNSLQVK	DNSNSLQVK	2	DNSNSLQVK2	114551	118242	122273
A2VD12	A2VD12	PBIP1_RAT	Pbxip1	Pre-B-cell leukemia transcription factor-interacting protein 1	1	DNSPDSVSWEELLR	DNSPDSVSWEELLR	2	DNSPDSVSWEELLR2		8079.19	9982.5
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	DNSQVNAVTVHTLLDK	DNSQVNAVTVHTLLDK	2	DNSQVNAVTVHTLLDK2	180075	191842	181587
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	DNSQVNAVTVHTLLDK	DNSQVNAVTVHTLLDK	3	DNSQVNAVTVHTLLDK3	247026	213108	311051
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	DNSTMGYMAAK	DNSTMGYMAAK	2	DNSTMGYMAAK2	897095	1.10301e+06	984225
P34058	P34058;A0A8I5ZRY7	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	DNSTMGYMMAK	DNSTMGYMMAK	2	DNSTMGYMMAK2	936876	1.21934e+06	1.0727e+06
P55280	P55280	CADH6_RAT	Cdh6	Cadherin-6	1	DNTAGILTR	DNTAGILTR	2	DNTAGILTR2	9587.71	5419.19	9316.48
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	DNTAGPHCEK	DNTAGPHC(UniMod:4)EK	2	DNTAGPHC(UniMod:4)EK2			10132.4
F1MAH6	F1MAH6	F1MAH6_RAT	Cdh11	Cadherin 11	1	DNTAGVYAR	DNTAGVYAR	2	DNTAGVYAR2	26005.6	15948.1	10508.8
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	DNTALLTQVQTTMR	DNTALLTQVQTTMR	2	DNTALLTQVQTTMR2	149177	136322	159073
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	DNTALLTQVQTTMR	DNTALLTQVQTTMR	3	DNTALLTQVQTTMR3	19262.5	18671	21808.7
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	DNTELPHHGK	DNTELPHHGK	2	DNTELPHHGK2			2019.21
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	DNTELPHHGK	DNTELPHHGK	3	DNTELPHHGK3			19858.8
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	DNTEQPVAPAAFQQALPAAVAQAGGPR	DNTEQPVAPAAFQQALPAAVAQAGGPR	3	DNTEQPVAPAAFQQALPAAVAQAGGPR3	7372.12	7002.11	12768.1
Q5EB62	Q5EB62	S2546_RAT	Slc25a46	Mitochondrial outer membrane protein SLC25A46	1	DNTGILECVK	DNTGILEC(UniMod:4)VK	2	DNTGILEC(UniMod:4)VK2	1727.87	5467.67	5248.09
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	DNTHPAEVTALGVSK	DNTHPAEVTALGVSK	2	DNTHPAEVTALGVSK2	2905.46		1264.83
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	DNTHPAEVTALGVSK	DNTHPAEVTALGVSK	3	DNTHPAEVTALGVSK3	4576.11	3666.91	5379.49
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	DNTIEHLLPLFLAQLK	DNTIEHLLPLFLAQLK	2	DNTIEHLLPLFLAQLK2	4604.19		1923.22
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	DNTIEHLLPLFLAQLK	DNTIEHLLPLFLAQLK	3	DNTIEHLLPLFLAQLK3		9977.37	20428.5
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	DNTIEHLLPLFLAQLKDECPEVR	DNTIEHLLPLFLAQLKDEC(UniMod:4)PEVR	3	DNTIEHLLPLFLAQLKDEC(UniMod:4)PEVR3	3892.84	6647.74	3296.69
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	DNTIEHLLPLFLAQLKDECPEVR	DNTIEHLLPLFLAQLKDEC(UniMod:4)PEVR	4	DNTIEHLLPLFLAQLKDEC(UniMod:4)PEVR4	33068.4	21646.2	34381.9
Q811U3	Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	1	DNTIMDLQTQLK	DNTIMDLQTQLK	2	DNTIMDLQTQLK2	5366.78		6629.41
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	DNTINLIHTFR	DNTINLIHTFR	2	DNTINLIHTFR2	76113.9	61640.5	71385.1
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	DNTINLIHTFR	DNTINLIHTFR	3	DNTINLIHTFR3	341029	352094	416293
A0A0G2K828	A0A0G2K828	A0A0G2K828_RAT	ENSRNOG00000066380	Ig-like domain-containing protein	1	DNTQNMLYLQMNTLR	DNTQNMLYLQMNTLR	2	DNTQNMLYLQMNTLR2	68399.3	61052.5	55653
A0A0G2K828	A0A0G2K828	A0A0G2K828_RAT	ENSRNOG00000066380	Ig-like domain-containing protein	1	DNTQNMLYLQMNTLR	DNTQNMLYLQMNTLR	3	DNTQNMLYLQMNTLR3	78298.8	62892.9	61088.5
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	DNTRPGANSPEMWSEAIK	DNTRPGANSPEMWSEAIK	3	DNTRPGANSPEMWSEAIK3	5292.74	6072.67	4267.08
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	DNTVHDLR	DNTVHDLR	2	DNTVHDLR2	2991.39	1236.26	3103.37
Q9JLH7	Q9JLH7	CK5P3_RAT	Cdk5rap3	CDK5 regulatory subunit-associated protein 3	1	DNTYLVELSSLLVR	DNTYLVELSSLLVR	2	DNTYLVELSSLLVR2	4296.52		4900.88
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	DNVASFIGWCR	DNVASFIGWC(UniMod:4)R	2	DNVASFIGWC(UniMod:4)R2	23561.2	14124.9	17714.5
Q6AY23	Q6AY23	P5CR2_RAT	Pycr2	Pyrroline-5-carboxylate reductase 2	1	DNVCSPGGATIHALHFLESGGFR	DNVC(UniMod:4)SPGGATIHALHFLESGGFR	4	DNVC(UniMod:4)SPGGATIHALHFLESGGFR4	13498.3	13871.9	9632.09
F7FPK8	F7FPK8	F7FPK8_RAT	Lman2	Lectin, mannose-binding 2	1	DNVDDPTGNFR	DNVDDPTGNFR	2	DNVDDPTGNFR2	254034	218930	264067
P08650	P08650	CO5_RAT	C5	Complement C5	1	DNVDVFHLAGLTFLTNANADDSQYHDDSCK	DNVDVFHLAGLTFLTNANADDSQYHDDSC(UniMod:4)K	4	DNVDVFHLAGLTFLTNANADDSQYHDDSC(UniMod:4)K4	10427.4	7758.93	11437.4
D4ADT5	D4ADT5	D4ADT5_RAT	Rig1	RNA helicase	1	DNVEELEQVVYKPQK	DNVEELEQVVYKPQK	3	DNVEELEQVVYKPQK3	1295.52		3832.98
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	DNVEGFSCER	DNVEGFSC(UniMod:4)ER	2	DNVEGFSC(UniMod:4)ER2	169386	211619	233746
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	DNVITPR	DNVITPR	2	DNVITPR2	18862.3	12979.5	26297.1
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	DNVLHVEINGISPK	DNVLHVEINGISPK	2	DNVLHVEINGISPK2	30759.5	25528.8	27208.3
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	DNVLHVEINGISPK	DNVLHVEINGISPK	3	DNVLHVEINGISPK3	176552	142612	150826
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	DNVNLAWTISPYLAVQLPAR	DNVNLAWTISPYLAVQLPAR	3	DNVNLAWTISPYLAVQLPAR3	6086.8		2784.51
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	DNVPCLK	DNVPC(UniMod:4)LK	2	DNVPC(UniMod:4)LK2	38681.4	27453.5	43076.1
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	DNVPFHGLVFPCSALGAEDNYTLVK	DNVPFHGLVFPC(UniMod:4)SALGAEDNYTLVK	3	DNVPFHGLVFPC(UniMod:4)SALGAEDNYTLVK3	27261.8	19267.9	19479.2
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	DNWEELYNR	DNWEELYNR	2	DNWEELYNR2	11322.2	8575.83	13590.7
Q3B7D2	Q3B7D2	SPTC2_RAT	Sptlc2	Serine palmitoyltransferase 2	1	DNWNRPICSVPGAK	DNWNRPIC(UniMod:4)SVPGAK	3	DNWNRPIC(UniMod:4)SVPGAK3	5038.85	11806.8	
Q810F4	Q810F4	FAM3C_RAT	Fam3c	Protein FAM3C	1	DNWVFCGGK	DNWVFC(UniMod:4)GGK	2	DNWVFC(UniMod:4)GGK2	34098.2	36278.4	50096.4
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	DNYAYSDRPEK	DNYAYSDRPEK	2	DNYAYSDRPEK2	2590.05	4276.69	5256.92
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	DNYAYSDRPEK	DNYAYSDRPEK	3	DNYAYSDRPEK3	28884.5	23470.8	28999
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	DNYDAQDLK	DNYDAQDLK	2	DNYDAQDLK2	64758.1	57505.7	54462.4
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	DNYDAQDLKR	DNYDAQDLKR	2	DNYDAQDLKR2	15268.2	15522.8	8680.91
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	DNYDAQDLKR	DNYDAQDLKR	3	DNYDAQDLKR3	216450	217525	220136
P02770	P02770	ALBU_RAT	Alb	Albumin	1	DNYGELADCCAK	DNYGELADC(UniMod:4)C(UniMod:4)AK	2	DNYGELADC(UniMod:4)C(UniMod:4)AK2	605003	585588	548346
P02770	P02770	ALBU_RAT	Alb	Albumin	1	DNYGELADCCAK	DNYGELADC(UniMod:4)C(UniMod:4)AK	3	DNYGELADC(UniMod:4)C(UniMod:4)AK3	4678.99		
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	DNYMEILNR	DNYMEILNR	2	DNYMEILNR2	13426.6	12395.3	16132.6
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	DNYNLLSYICR	DNYNLLSYIC(UniMod:4)R	2	DNYNLLSYIC(UniMod:4)R2	31605.2	27232.5	27555.3
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	DNYPQSVPR	DNYPQSVPR	2	DNYPQSVPR2	29295.5	29434.5	25318.1
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	DNYPVAILQAQAR	DNYPVAILQAQAR	2	DNYPVAILQAQAR2	108465	109848	111606
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	DNYPVAILQAQAR	DNYPVAILQAQAR	3	DNYPVAILQAQAR3	31239.5	40994.4	20062.1
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	DNYSPGWK	DNYSPGWK	2	DNYSPGWK2	68615.8	69570.2	77161.2
P23965	P23965	ECI1_RAT	Eci1	Enoyl-CoA delta isomerase 1, mitochondrial	1	DNYVNTIGHR	DNYVNTIGHR	2	DNYVNTIGHR2	18023	12180.3	11962.4
P23965	P23965	ECI1_RAT	Eci1	Enoyl-CoA delta isomerase 1, mitochondrial	1	DNYVNTIGHR	DNYVNTIGHR	3	DNYVNTIGHR3	77402.9	80126.1	92971
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	DPAAAPATGNK	DPAAAPATGNK	2	DPAAAPATGNK2	58618.3		65619.2
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	DPAAAPATGNKK	DPAAAPATGNKK	2	DPAAAPATGNKK2			3637.04
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	DPAAAPATGNKK	DPAAAPATGNKK	3	DPAAAPATGNKK3			11623.7
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	DPAALPALCDLLASATDPQIR	DPAALPALC(UniMod:4)DLLASATDPQIR	3	DPAALPALC(UniMod:4)DLLASATDPQIR3	2890.98	1204.82	2448.26
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	DPAFEGR	DPAFEGR	2	DPAFEGR2	14815.8	18419.5	24514.6
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	DPALCCTLSPGDK	DPALC(UniMod:4)C(UniMod:4)TLSPGDK	2	DPALC(UniMod:4)C(UniMod:4)TLSPGDK2	696247	442004	441701
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	DPALTLAELR	DPALTLAELR	2	DPALTLAELR2	69083.2	66219.4	51153.2
Q63470	Q63470	DYR1A_RAT	Dyrk1a	Dual specificity tyrosine-phosphorylation-regulated kinase 1A	1	DPATAPLRK	DPATAPLRK	2	DPATAPLRK2	4534.84	1258.61	1328.82
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	DPAVPTGGCK	DPAVPTGGC(UniMod:4)K	2	DPAVPTGGC(UniMod:4)K2	96768.8	71166.7	74539.9
A0A8I6ACK9	A0A8I6ACK9	A0A8I6ACK9_RAT	Abcg3l3	ATP-binding cassette, subfamily G (WHITE), member 3-like 3	1	DPCGLSGDILVNGKPQPANFK	DPC(UniMod:4)GLSGDILVNGKPQPANFK	3	DPC(UniMod:4)GLSGDILVNGKPQPANFK3	2957.64	2261.19	1389.86
F7F5P4	F7F5P4	F7F5P4_RAT	Il18bp	Interleukin 18 binding protein	1	DPCSSWSPAVPTK	DPC(UniMod:4)SSWSPAVPTK	2	DPC(UniMod:4)SSWSPAVPTK2	4664.7	9160.89	2400.61
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	DPDAAKPEDWDER	DPDAAKPEDWDER	2	DPDAAKPEDWDER2	58844.3	70047.5	56784.8
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	DPDAAKPEDWDER	DPDAAKPEDWDER	3	DPDAAKPEDWDER3	295124	267064	279489
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	DPDAAMR	DPDAAMR	2	DPDAAMR2	13235.9		7013.73
F1MAH6	F1MAH6	F1MAH6_RAT	Cdh11	Cadherin 11	1	DPDAANSPIR	DPDAANSPIR	2	DPDAANSPIR2	9567.6	3732.12	1471.47
P53534	P53534	PYGB_RAT	Pygb	Glycogen phosphorylase, brain form (Fragment)	1	DPDCFKDVVNMLMYHDR	DPDC(UniMod:4)FKDVVNMLMYHDR	3	DPDC(UniMod:4)FKDVVNMLMYHDR3	6118.94	5832.39	2572.54
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	DPDILFMR	DPDILFMR	2	DPDILFMR2	12320.1	7163.56	8339.19
F7FLB2	F7FLB2	F7FLB2_RAT	Pgm2	phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	1	DPDPEFPTVK	DPDPEFPTVK	2	DPDPEFPTVK2	13245.4	18283	10772.7
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	DPDQTDGPGLSYLSSHIANVER	DPDQTDGPGLSYLSSHIANVER	3	DPDQTDGPGLSYLSSHIANVER3	538379	471677	517077
A0A8I6AM66	A0A8I6AM66	A0A8I6AM66_RAT	Cdh15	Cadherin 15	1	DPDTEQLQR	DPDTEQLQR	2	DPDTEQLQR2	4779.77	6125.92	8205.09
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	DPDTFLIIIK	DPDTFLIIIK	2	DPDTFLIIIK2	9701.98	8474.14	9128.96
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	DPEEQGDIVVALYPYDGIHPDDLSFK	DPEEQGDIVVALYPYDGIHPDDLSFK	3	DPEEQGDIVVALYPYDGIHPDDLSFK3	13882.1	13348.3	13249.7
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	DPEEQGDIVVALYPYDGIHPDDLSFK	DPEEQGDIVVALYPYDGIHPDDLSFK	4	DPEEQGDIVVALYPYDGIHPDDLSFK4	6455.43	5259.04	5906.97
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	DPEEQGDIVVALYPYDGIHPDDLSFKK	DPEEQGDIVVALYPYDGIHPDDLSFKK	4	DPEEQGDIVVALYPYDGIHPDDLSFKK4	24217.8	26310	24763.3
P54001	P54001	P4HA1_RAT	P4ha1	Prolyl 4-hydroxylase subunit alpha-1	1	DPEGFVGHPVNAFK	DPEGFVGHPVNAFK	2	DPEGFVGHPVNAFK2	9313.84		5601.6
P54001	P54001	P4HA1_RAT	P4ha1	Prolyl 4-hydroxylase subunit alpha-1	1	DPEGFVGHPVNAFK	DPEGFVGHPVNAFK	3	DPEGFVGHPVNAFK3	15606.4	16603.8	19320.7
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	DPEGLTVSYSLK	DPEGLTVSYSLK	2	DPEGLTVSYSLK2	241633	210630	196803
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	DPEIQFSGPLEVGKPVMVK	DPEIQFSGPLEVGKPVMVK	3	DPEIQFSGPLEVGKPVMVK3	110938	103063	101051
A0A8I5ZNK2	A0A8I5ZNK2	A0A8I5ZNK2_RAT	Oxsr1	non-specific serine/threonine protein kinase	1	DPEKRPTAAELLR	DPEKRPTAAELLR	3	DPEKRPTAAELLR3	3250.88	5710.36	
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	DPELWGSVLLESNPYR	DPELWGSVLLESNPYR	2	DPELWGSVLLESNPYR2	21977.9	15022.3	19284.6
P09527	P09527	RAB7A_RAT	Rab7a	Ras-related protein Rab-7a	1	DPENFPFVVLGNK	DPENFPFVVLGNK	2	DPENFPFVVLGNK2	275112	312069	353274
P09527	P09527	RAB7A_RAT	Rab7a	Ras-related protein Rab-7a	1	DPENFPFVVLGNK	DPENFPFVVLGNK	3	DPENFPFVVLGNK3	9263.67	4744.57	8645.1
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	DPETLLGYSMVGCQR	DPETLLGYSMVGC(UniMod:4)QR	2	DPETLLGYSMVGC(UniMod:4)QR2	6145.11	6915.67	7552.64
Q8R491	Q8R491	EHD3_RAT	Ehd3	EH domain-containing protein 3	1	DPEVFQTVSEGLK	DPEVFQTVSEGLK	2	DPEVFQTVSEGLK2	14922.9	15854.9	16243.6
Q68FR6	Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	1	DPFAHLPK	DPFAHLPK	2	DPFAHLPK2	147863	93255.3	102537
A0A0G2JVD6	A0A0G2JVD6	A0A0G2JVD6_RAT	Kmt2d	[histone H3]-lysine(4) N-methyltransferase	1	DPFAPLHK	DPFAPLHK	2	DPFAPLHK2	53145.1	47618.2	37285.7
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	DPFAPSR	DPFAPSR	2	DPFAPSR2	100728	120317	123444
Q4V884	Q4V884	Q4V884_RAT	Cdc16	CDC16 cell division cycle 16 homolog (S. cerevisiae)	1	DPFHANCLPVHIGTLVELNK	DPFHANC(UniMod:4)LPVHIGTLVELNK	4	DPFHANC(UniMod:4)LPVHIGTLVELNK4	3039.12	1053.02	
Q63678	Q63678	ZA2G_RAT	Azgp1	Zinc-alpha-2-glycoprotein	1	DPFVCHIEHK	DPFVC(UniMod:4)HIEHK	3	DPFVC(UniMod:4)HIEHK3	46174.6	35742.8	37441.6
P97696	P97696	CYH3_RAT	Cyth3	Cytohesin-3	1	DPFYDMLATR	DPFYDMLATR	2	DPFYDMLATR2	30486.5	21561.9	10021.9
P97694	P97694	CYH1_RAT	Cyth1	Cytohesin-1	1	DPFYEMLAAR	DPFYEMLAAR	2	DPFYEMLAAR2	35837.2	27421.7	52527.6
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	DPFYMGLYQK	DPFYMGLYQK	2	DPFYMGLYQK2	30157.4	25391.9	42253.9
Q6P799	Q6P799	SYSC_RAT	Sars1	Serine--tRNA ligase, cytoplasmic	1	DPGLVDQLVK	DPGLVDQLVK	2	DPGLVDQLVK2	9795.65	5932.3	
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	DPGMTGSYGDIFESSSLRPR	DPGMTGSYGDIFESSSLRPR	3	DPGMTGSYGDIFESSSLRPR3	204372	178835	156445
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	DPGNEQGPIHGHGWLHAK	DPGNEQGPIHGHGWLHAK	2	DPGNEQGPIHGHGWLHAK2	87449.6	47497.8	50422.3
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	DPGNEQGPIHGHGWLHAK	DPGNEQGPIHGHGWLHAK	3	DPGNEQGPIHGHGWLHAK3	356995	239681	179148
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	DPGNEQGPIHGHGWLHAK	DPGNEQGPIHGHGWLHAK	4	DPGNEQGPIHGHGWLHAK4	2.259e+06	1.74373e+06	1.50063e+06
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	DPGPQLR	DPGPQLR	2	DPGPQLR2	3.19638e+06	3.64507e+06	3.55032e+06
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	DPGSVGDTIPSAELVK	DPGSVGDTIPSAELVK	2	DPGSVGDTIPSAELVK2	3492.94		2139.11
B5DF55	B5DF55	B5DF55_RAT	Stam	Signal transducing adaptor molecule	1	DPGTVATK	DPGTVATK	2	DPGTVATK2	16175.4		6025.49
D3ZSQ1	D3ZSQ1	D3ZSQ1_RAT	Pcnx3	Pecanex-like protein	1	DPGVEMTVFR	DPGVEMTVFR	2	DPGVEMTVFR2		1975.22	4963.08
D3ZR49	D3ZR49	D3ZR49_RAT	Man1a2	alpha-1,2-Mannosidase	1	DPGVFLIHGPDEHR	DPGVFLIHGPDEHR	3	DPGVFLIHGPDEHR3	14609.5	6570.01	11041.9
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	DPGVITYDLPTPPGEK	DPGVITYDLPTPPGEK	2	DPGVITYDLPTPPGEK2	9429.13	8290.13	1906.98
Q6B345	Q6B345;F1M053;F1LYQ0	S10AB_RAT	S100a11	Protein S100-A11	0	DPGVLDR	DPGVLDR	2	DPGVLDR2	46064.6	19502.8	
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	DPHLACVAYER	DPHLAC(UniMod:4)VAYER	2	DPHLAC(UniMod:4)VAYER2	30580.5	14408.2	29515.7
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	DPHLACVAYER	DPHLAC(UniMod:4)VAYER	3	DPHLAC(UniMod:4)VAYER3	90415.6	95369.9	89843.1
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	DPHVDQYETK	DPHVDQYETK	3	DPHVDQYETK3	26175.4	10556.2	18752.9
G3V9L1	G3V9L1	G3V9L1_RAT	Tex2	Testis expressed 2	1	DPILYLFGR	DPILYLFGR	2	DPILYLFGR2	28441.6	30578.9	27233.6
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	DPIVIGVTVEAGQVK	DPIVIGVTVEAGQVK	2	DPIVIGVTVEAGQVK2	38828.5	34573	36058.6
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	DPIVNVWYSVNGER	DPIVNVWYSVNGER	2	DPIVNVWYSVNGER2	20359	18694.1	13682.3
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	DPIVNVWYSVNGER	DPIVNVWYSVNGER	3	DPIVNVWYSVNGER3	5704.59	9693.31	4603.97
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	DPLAALAR	DPLAALAR	2	DPLAALAR2	12703.8	8608.4	7111.95
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	DPLFYLDAR	DPLFYLDAR	2	DPLFYLDAR2	12641.6		6854.74
B0BNI5	B0BNI5	OLFL3_RAT	Olfml3	Olfactomedin-like protein 3	1	DPLGPAEK	DPLGPAEK	2	DPLGPAEK2	119559	111370	101329
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	DPLLASGTDGVGTK	DPLLASGTDGVGTK	2	DPLLASGTDGVGTK2	6376.19	2474.98	4244.41
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	DPLLDDHGDFIR	DPLLDDHGDFIR	3	DPLLDDHGDFIR3	6818.39		
F7EPH4	F7EPH4	F7EPH4_RAT	Ppa1	inorganic diphosphatase	1	DPLNPIK	DPLNPIK	2	DPLNPIK2	16244.4	12733.7	20210.3
Q6IUP3	Q6IUP3	ELP5_RAT	Elp5	Elongator complex protein 5	1	DPLNWSQPGEAAPEGPLK	DPLNWSQPGEAAPEGPLK	2	DPLNWSQPGEAAPEGPLK2	13149.4	11642.5	5103.48
Q6IUP3	Q6IUP3	ELP5_RAT	Elp5	Elongator complex protein 5	1	DPLNWSQPGEAAPEGPLK	DPLNWSQPGEAAPEGPLK	3	DPLNWSQPGEAAPEGPLK3	6620.61	3254.78	
Q64303	Q64303	PAK2_RAT	Pak2	Serine/threonine-protein kinase PAK 2	1	DPLSANHSLKPLPSVPEEK	DPLSANHSLKPLPSVPEEK	4	DPLSANHSLKPLPSVPEEK4	12145.5	13462.3	16082.4
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	DPLSNYAVK	DPLSNYAVK	2	DPLSNYAVK2	24089.2	13775	20533.7
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	DPLTQVPCENVMVR	DPLTQVPC(UniMod:4)ENVMVR	2	DPLTQVPC(UniMod:4)ENVMVR2	11407	10667.2	7162.75
G3V7V5	G3V7V5	G3V7V5_RAT	Fkbp11	peptidylprolyl isomerase	1	DPLVIELGQK	DPLVIELGQK	2	DPLVIELGQK2	53394.3	45128.5	58089.2
F1M9Z5	F1M9Z5	F1M9Z5_RAT	Cd300le	Cd300 molecule-like family member E	1	DPMFEVR	DPMFEVR	2	DPMFEVR2	265367	213439	193530
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	DPMIDNNR	DPMIDNNR	2	DPMIDNNR2	23202.9	13271.8	22425.6
F1LXF5	F1LXF5	F1LXF5_RAT	Get4	Guided entry of tail-anchored proteins factor 4	1	DPMYNEYLDR	DPMYNEYLDR	2	DPMYNEYLDR2	24217.2	18350.7	26195.8
D3ZAZ0	D3ZAZ0	D3ZAZ0_RAT	Eif3m	Eukaryotic translation initiation factor 3 subunit M	1	DPNAFLFDHLLTLKPVK	DPNAFLFDHLLTLKPVK	3	DPNAFLFDHLLTLKPVK3	7355.39	6292.86	3888.12
D3ZAZ0	D3ZAZ0	D3ZAZ0_RAT	Eif3m	Eukaryotic translation initiation factor 3 subunit M	1	DPNAFLFDHLLTLKPVK	DPNAFLFDHLLTLKPVK	4	DPNAFLFDHLLTLKPVK4	3545.04	2221.42	1025.73
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	DPNALFETHGAEEIR	DPNALFETHGAEEIR	3	DPNALFETHGAEEIR3	104355	116420	101343
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	DPNASPGDAGEQAIR	DPNASPGDAGEQAIR	2	DPNASPGDAGEQAIR2	1.26848e+06	1.00495e+06	1.09576e+06
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	DPNASPGDAGEQAIR	DPNASPGDAGEQAIR	3	DPNASPGDAGEQAIR3	46467.6	31869.7	38639.2
Q04753	Q04753	ICLN_RAT	Clns1a	Methylosome subunit pICln	1	DPNAYPQEHLYVMVNAR	DPNAYPQEHLYVMVNAR	3	DPNAYPQEHLYVMVNAR3	26871.2	15418.2	25515.4
P20070	P20070	NB5R3_RAT	Cyb5r3	NADH-cytochrome b5 reductase 3	1	DPNDHTVCYLLFANQSEK	DPNDHTVC(UniMod:4)YLLFANQSEK	3	DPNDHTVC(UniMod:4)YLLFANQSEK3	20879.4	12580.9	18510.5
P04916	P04916	RET4_RAT	Rbp4	Retinol-binding protein 4	1	DPNGLTPETR	DPNGLTPETR	2	DPNGLTPETR2	123424	115506	112010
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	DPNIVIAK	DPNIVIAK	2	DPNIVIAK2	102060	59852.7	84540.6
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	DPNNLFMVR	DPNNLFMVR	2	DPNNLFMVR2	185502	201451	199732
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	DPNNLLNDWSQK	DPNNLLNDWSQK	2	DPNNLLNDWSQK2	70340.5	60867	64732.5
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	DPNNLLNDWSQK	DPNNLLNDWSQK	3	DPNNLLNDWSQK3	3407.67	4698.88	1490.54
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	DPNNQLHIIK	DPNNQLHIIK	2	DPNNQLHIIK2	7057.22		5192.45
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	DPNNQLHIIK	DPNNQLHIIK	3	DPNNQLHIIK3	5250.49	11525.5	4937.28
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	DPNNSLTLWVIDQGLK	DPNNSLTLWVIDQGLK	2	DPNNSLTLWVIDQGLK2	3782.41	1453.47	6401.43
D3ZGE9	M0R7T6;D3ZGE9	D3ZGE9_RAT	Rbm38	RNA binding motif protein 38	0	DPNPIIDGR	DPNPIIDGR	2	DPNPIIDGR2	5179.7	6692	
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	DPNSGLPK	DPNSGLPK	2	DPNSGLPK2	12395		8579.67
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	DPPANVQLFQEVPK	DPPANVQLFQEVPK	2	DPPANVQLFQEVPK2	61703	62172.3	58229.9
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	DPPANVQLFQEVPK	DPPANVQLFQEVPK	3	DPPANVQLFQEVPK3	18027.8	14778.2	23859.4
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	DPPAPGPASR	DPPAPGPASR	2	DPPAPGPASR2	111997	99623.1	78909.6
A0A8I6A5H5	A0A8I6A5H5	A0A8I6A5H5_RAT	Rela	RELA proto-oncogene, NF-kB subunit	1	DPPHRPHPHELVGK	DPPHRPHPHELVGK	3	DPPHRPHPHELVGK3	13959.3		6874.57
A0A8I6A5H5	A0A8I6A5H5	A0A8I6A5H5_RAT	Rela	RELA proto-oncogene, NF-kB subunit	1	DPPHRPHPHELVGK	DPPHRPHPHELVGK	4	DPPHRPHPHELVGK4			6961.73
D3Z8L7	D3Z8L7	RRAS_RAT	Rras	Ras-related protein R-Ras	1	DPPPGETHK	DPPPGETHK	2	DPPPGETHK2			13743.4
P14046	A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	DPPPKDPVIETIR	DPPPKDPVIETIR	2	DPPPKDPVIETIR2	2.24094e+06	2.02722e+06	2.10651e+06
P14046	A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	DPPPKDPVIETIR	DPPPKDPVIETIR	3	DPPPKDPVIETIR3	6.76799e+06	5.01625e+06	5.57399e+06
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	DPPSDPSPLEAEYQR	DPPSDPSPLEAEYQR	2	DPPSDPSPLEAEYQR2	1579.42		3016.4
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	DPQALSEHLK	DPQALSEHLK	2	DPQALSEHLK2	50756	38591.2	34959.9
P0C2X9	P0C2X9	AL4A1_RAT	Aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1	DPQEPIMK	DPQEPIMK	2	DPQEPIMK2	27558.9	20658.1	25446.5
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	DPQGEYEEHLGILGPVIR	DPQGEYEEHLGILGPVIR	3	DPQGEYEEHLGILGPVIR3	257727	233266	166534
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	DPQGEYEEHLGILGPVIR	DPQGEYEEHLGILGPVIR	4	DPQGEYEEHLGILGPVIR4	39310.1	52393.3	48597.2
P20788	P20788	UCRI_RAT	Uqcrfs1	Cytochrome b-c1 complex subunit Rieske, mitochondrial	1	DPQHDLER	DPQHDLER	2	DPQHDLER2	26097.9	26763.1	31463.3
Q5PPL3	Q5PPL3	NSDHL_RAT	Nsdhl	Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating	1	DPQLVPVLIDAAR	DPQLVPVLIDAAR	2	DPQLVPVLIDAAR2	94676.9	85715.7	95190.3
Q5PPL3	Q5PPL3	NSDHL_RAT	Nsdhl	Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating	1	DPQLVPVLIDAAR	DPQLVPVLIDAAR	3	DPQLVPVLIDAAR3	6611.75	8218.51	13968.9
D3ZKT0	D3ZKT0	TAM41_RAT	Tamm41	Phosphatidate cytidylyltransferase, mitochondrial	1	DPQMVYK	DPQMVYK	2	DPQMVYK2	10839.7	11899.7	11455.2
G3V7E6	G3V7E6	G3V7E6_RAT	Pcm1	Pericentriolar material 1	1	DPQQEPMEETENLKK	DPQQEPMEETENLKK	3	DPQQEPMEETENLKK3	2982.53	2000.29	
Q6P691	Q6P691	Q6P691_RAT	C2cd2	C2 calcium-dependent domain containing 2	1	DPRPQSLQLTVGEVSSVVK	DPRPQSLQLTVGEVSSVVK	3	DPRPQSLQLTVGEVSSVVK3	7327.04	6326.29	5420.91
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	DPSAVAK	DPSAVAK	1	DPSAVAK1	5800.43		3038.72
O35314	O35314	SCG1_RAT	Chgb	Secretogranin-1	1	DPSDASVGR	DPSDASVGR	2	DPSDASVGR2	29358.1	18923.8	21043.3
Q64380	Q64380	SARDH_RAT	Sardh	Sarcosine dehydrogenase, mitochondrial	1	DPSGGPVSLDFVK	DPSGGPVSLDFVK	2	DPSGGPVSLDFVK2	4027.78		3077.32
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	DPSGLLISVIR	DPSGLLISVIR	2	DPSGLLISVIR2	3687.74	2840.06	
G3V6Q3	A0A8I5Y6K0;G3V6Q3	G3V6Q3_RAT	Wdr13	Uncharacterized protein	0	DPSLLINACLNK	DPSLLINAC(UniMod:4)LNK	2	DPSLLINAC(UniMod:4)LNK2	5541.67	4584.63	6470.32
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	DPSLPYLEQYR	DPSLPYLEQYR	2	DPSLPYLEQYR2	51974.5	63030.9	39189.3
Q6P691	Q6P691	Q6P691_RAT	C2cd2	C2 calcium-dependent domain containing 2	1	DPSLSQSHNDLVFLQQPEGR	DPSLSQSHNDLVFLQQPEGR	3	DPSLSQSHNDLVFLQQPEGR3	11387.8	4395.78	2681.56
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	DPSLTEVLLTELKPDTQYK	DPSLTEVLLTELKPDTQYK	3	DPSLTEVLLTELKPDTQYK3	506443	376125	554383
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	DPSNGQMYQK	DPSNGQMYQK	2	DPSNGQMYQK2	7782.29	13224.7	8114.69
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	DPSQIDSNEPYMK	DPSQIDSNEPYMK	2	DPSQIDSNEPYMK2	23972.6	17885.8	21358.5
Q499P3	Q499P3	C1GLC_RAT	C1galt1c1	C1GALT1-specific chaperone 1	1	DPSQPFYLGHTVK	DPSQPFYLGHTVK	3	DPSQPFYLGHTVK3	3814.7	6986.31	
P0C8E4	P0C8E4	M3K7_RAT	Map3k7	Mitogen-activated protein kinase kinase kinase 7	1	DPSQRPSMEEIVK	DPSQRPSMEEIVK	3	DPSQRPSMEEIVK3	25731.2	27149.5	30545
A0A8I6GAE6	A0A8I6GAE6;Q9QY16	A0A8I6GAE6_RAT	Ddx19b	RNA helicase	0	DPSSPLYSVK	DPSSPLYSVK	2	DPSSPLYSVK2	12547.9	9804.65	13350.7
Q5GF25	Q5GF25	MANEA_RAT	Manea	Glycoprotein endo-alpha-1,2-mannosidase	1	DPSVIETHMK	DPSVIETHMK	2	DPSVIETHMK2	2508.78	2221.66	5519.06
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	DPSVLTVR	DPSVLTVR	2	DPSVLTVR2	16227.8	8900.81	13494.5
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	DPSVVVR	DPSVVVR	2	DPSVVVR2	85182.5	91461.8	74583.6
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	DPSWIIR	DPSWIIR	2	DPSWIIR2	22300.8	19002.5	24028.7
P03994	P03994	HPLN1_RAT	Hapln1	Hyaluronan and proteoglycan link protein 1	1	DPTAFGSGIHK	DPTAFGSGIHK	2	DPTAFGSGIHK2	6085.26	3969.96	2964.91
Q62703	Q62703	RCN2_RAT	Rcn2	Reticulocalbin-2	1	DPTANEDPEWILVEK	DPTANEDPEWILVEK	2	DPTANEDPEWILVEK2	4104.18	2333.81	
Q641Z2	Q641Z2	PTN9_RAT	Ptpn9	Tyrosine-protein phosphatase non-receptor type 9	1	DPTGASIALFTAR	DPTGASIALFTAR	2	DPTGASIALFTAR2	3456.31	2681.85	2460.86
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	DPTGHLSLQDNR	DPTGHLSLQDNR	2	DPTGHLSLQDNR2	5945.08	7002.65	2159.78
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	DPTGHLSLQDNR	DPTGHLSLQDNR	3	DPTGHLSLQDNR3	23821.4	16308	18399.3
D3ZD11	D3ZD11	D3ZD11_RAT	Spcs2	Signal peptidase complex subunit 2	1	DPTGMDPDDIWQLSSSLK	DPTGMDPDDIWQLSSSLK	3	DPTGMDPDDIWQLSSSLK3	9390.27	5948.48	6517.49
D3ZD11	D3ZD11	D3ZD11_RAT	Spcs2	Signal peptidase complex subunit 2	1	DPTGMDPDDIWQLSSSLKR	DPTGMDPDDIWQLSSSLKR	3	DPTGMDPDDIWQLSSSLKR3	8393.4	7335	9613.26
P24268	P24268	CATD_RAT	Ctsd	Cathepsin D	1	DPTGQPGGELMLGGTDSR	DPTGQPGGELMLGGTDSR	2	DPTGQPGGELMLGGTDSR2	60388.9	44604.6	46102.3
P24268	P24268	CATD_RAT	Ctsd	Cathepsin D	1	DPTGQPGGELMLGGTDSR	DPTGQPGGELMLGGTDSR	3	DPTGQPGGELMLGGTDSR3	5809.34	4204.68	6893.99
Q62825	Q62825	EXOC3_RAT	Exoc3	Exocyst complex component 3	1	DPTLLVSVVR	DPTLLVSVVR	2	DPTLLVSVVR2	5380.7	2281.65	2576.42
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	DPTLTFR	DPTLTFR	2	DPTLTFR2	16609.5	12637.4	18604
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	DPTMGNPK	DPTMGNPK	2	DPTMGNPK2		146003	
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	DPTVCLNEGMAPPTPPR	DPTVC(UniMod:4)LNEGMAPPTPPR	2	DPTVC(UniMod:4)LNEGMAPPTPPR2	7874.04	4402.9	
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	DPTVCLNEGMAPPTPPR	DPTVC(UniMod:4)LNEGMAPPTPPR	3	DPTVC(UniMod:4)LNEGMAPPTPPR3	7671.76	7337.82	4714.11
Q8VHE9	Q8VHE9	RETST_RAT	Retsat	All-trans-retinol 13,14-reductase	1	DPTWEDRFPDR	DPTWEDRFPDR	3	DPTWEDRFPDR3	19454.3	23193.8	33489.6
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	DPVHTVSHTVISLPTFR	DPVHTVSHTVISLPTFR	2	DPVHTVSHTVISLPTFR2	18273.5	9509.51	6912.45
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	DPVHTVSHTVISLPTFR	DPVHTVSHTVISLPTFR	3	DPVHTVSHTVISLPTFR3	246155	169637	111614
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	DPVHTVSHTVISLPTFR	DPVHTVSHTVISLPTFR	4	DPVHTVSHTVISLPTFR4	285971	167666	151814
P14046	A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	DPVIETIR	DPVIETIR	2	DPVIETIR2	1.07592e+07	7.65969e+06	8.21576e+06
Q80Z29	Q80Z29	NAMPT_RAT	Nampt	Nicotinamide phosphoribosyltransferase	1	DPVPGYSVPAAEHSTITAWGK	DPVPGYSVPAAEHSTITAWGK	3	DPVPGYSVPAAEHSTITAWGK3	13292.5	12508.5	10690.1
F1MAA4	F1MAA4	F1MAA4_RAT	Atp13a2	ATPase cation transporting 13A2	1	DPVQATDYPVEPESQSR	DPVQATDYPVEPESQSR	2	DPVQATDYPVEPESQSR2	3618.33	1004.65	9609.48
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	DPVQLNLLYVQAR	DPVQLNLLYVQAR	2	DPVQLNLLYVQAR2	567730	459817	471838
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	DPVQLNLLYVQAR	DPVQLNLLYVQAR	3	DPVQLNLLYVQAR3	146998	119385	142201
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	DPVRDFPFELNPEPPEGGPPGPWVLHR	DPVRDFPFELNPEPPEGGPPGPWVLHR	4	DPVRDFPFELNPEPPEGGPPGPWVLHR4	21565	34512.9	46630.8
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	DPVSESNPELLTFPSFHQGLR	DPVSESNPELLTFPSFHQGLR	3	DPVSESNPELLTFPSFHQGLR3	3338.35	6377.13	3723.85
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	DPVSIEER	DPVSIEER	2	DPVSIEER2	18483.5	21215.8	27854.4
E9PSP1	E9PSP1	E9PSP1_RAT	Pltp	Phospholipid transfer protein	1	DPVVSNGNLDMEFR	DPVVSNGNLDMEFR	2	DPVVSNGNLDMEFR2	28679.3	25605.2	24768.9
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	DPWELDLDIK	DPWELDLDIK	2	DPWELDLDIK2	409962	325530	331064
D3ZHA1	D3ZHA1	D3ZHA1_RAT	B4gat1	Beta-1,4-glucuronyltransferase 1	1	DPWEPFYVAGGK	DPWEPFYVAGGK	2	DPWEPFYVAGGK2	4156.98		5686.95
B5DFC3	B5DFC3	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	1	DPWPVPQGK	DPWPVPQGK	2	DPWPVPQGK2	18584.5	10191.4	20819.5
A0A8I6G5Q1	A0A8I6G5Q1	A0A8I6G5Q1_RAT	Sema4d	Semaphorin 4D	1	DPYCAWSPAIK	DPYC(UniMod:4)AWSPAIK	2	DPYC(UniMod:4)AWSPAIK2	4984.55	5145.96	13629.8
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	DPYCGWCVLLGR	DPYC(UniMod:4)GWC(UniMod:4)VLLGR	2	DPYC(UniMod:4)GWC(UniMod:4)VLLGR2	3229.92	6939.53	
A0A0G2JZC4	A0A0G2JZC4	A0A0G2JZC4_RAT	Sema6d	Semaphorin 6D	1	DPYCGWLSQGVCER	DPYC(UniMod:4)GWLSQGVC(UniMod:4)ER	2	DPYC(UniMod:4)GWLSQGVC(UniMod:4)ER2	5706.99	4696.66	6434.31
A1L1K6	A1L1K6	A1L1K6_RAT	Gtf3c5	General transcription factor IIIC subunit 5	1	DPYCHPVCANR	DPYC(UniMod:4)HPVC(UniMod:4)ANR	3	DPYC(UniMod:4)HPVC(UniMod:4)ANR3	2469.87	1429.79	2818.73
P35433	P35433	PUR1_RAT	Ppat	Amidophosphoribosyltransferase	1	DPYGNRPLCIGR	DPYGNRPLC(UniMod:4)IGR	3	DPYGNRPLC(UniMod:4)IGR3	16587.4	17095.7	10820.9
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	DPYHETLNPDSHLIENVVTTFAPNR	DPYHETLNPDSHLIENVVTTFAPNR	4	DPYHETLNPDSHLIENVVTTFAPNR4	29627.7	27110.6	28562.4
A0A8I5ZMX2	A0A8I5ZMX2	A0A8I5ZMX2_RAT	Adamts3	ADAM metallopeptidase with thrombospondin type 1, motif 3	1	DPYSICVR	DPYSIC(UniMod:4)VR	2	DPYSIC(UniMod:4)VR2	4473.2	10889.8	12485.8
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	DPYTVGQAR	DPYTVGQAR	2	DPYTVGQAR2	111528	113924	86403.5
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	DQADWLLR	DQADWLLR	2	DQADWLLR2	32038.5	33359.3	36156.7
A0A8I6AAA9	A0A8I6AAA9	A0A8I6AAA9_RAT	Lrch1	Leucine rich repeats and calponin homology domain containing 1	1	DQAEDCEELLR	DQAEDC(UniMod:4)EELLR	2	DQAEDC(UniMod:4)EELLR2	3752.36	4205.9	3476.94
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	DQAENEDGAQENTFSMDPQLER	DQAENEDGAQENTFSMDPQLER	3	DQAENEDGAQENTFSMDPQLER3	18664.9	13858.1	15332.7
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	DQAGSSTGYPASR	DQAGSSTGYPASR	2	DQAGSSTGYPASR2	2808.71		
P97531	P97531	CIP4_RAT	Trip10	Cdc42-interacting protein 4	1	DQAHFYFSQMPQIFDK	DQAHFYFSQMPQIFDK	3	DQAHFYFSQMPQIFDK3	9691.12	10858.5	8434.83
A0A8J8Y9Q4	A0A8J8Y9Q4	A0A8J8Y9Q4_RAT	Zfyve19	Zinc finger FYVE-type containing 19	1	DQAIAER	DQAIAER	2	DQAIAER2		10267.4	
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	DQALTEEHSR	DQALTEEHSR	2	DQALTEEHSR2	256023	206072	225642
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	DQALTEEHSR	DQALTEEHSR	3	DQALTEEHSR3	435174		458827
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	DQAPDEFVGLGLVGGNVDWK	DQAPDEFVGLGLVGGNVDWK	3	DQAPDEFVGLGLVGGNVDWK3	9789.07		3514.47
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	DQASEQLVGGQLTR	DQASEQLVGGQLTR	2	DQASEQLVGGQLTR2	49301.5	48653.4	43825.7
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	DQASEQLVGGQLTR	DQASEQLVGGQLTR	3	DQASEQLVGGQLTR3	8614.37	13819.9	15277.3
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	DQATEEPWLSSTVLLK	DQATEEPWLSSTVLLK	2	DQATEEPWLSSTVLLK2	21582.4	16897.7	21242.5
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	DQATEEPWLSSTVLLK	DQATEEPWLSSTVLLK	3	DQATEEPWLSSTVLLK3		4739.97	3010.67
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	DQATSSDNIFIAPVGISTAMGMISLGLR	DQATSSDNIFIAPVGISTAMGMISLGLR	3	DQATSSDNIFIAPVGISTAMGMISLGLR3	27702.2	20631.8	33762.3
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	DQATVHVYMK	DQATVHVYMK	3	DQATVHVYMK3	8510.56	9337.77	
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	DQAVFPQNGLVVSSVDVQSVEPVDQR	DQAVFPQNGLVVSSVDVQSVEPVDQR	3	DQAVFPQNGLVVSSVDVQSVEPVDQR3	31428.5	30845.7	22152
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	DQAVLQK	DQAVLQK	1	DQAVLQK1	18033.4	15689.7	23374.9
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	DQAVLQK	DQAVLQK	2	DQAVLQK2	622103	248999	605416
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	DQAVMISGESGAGK	DQAVMISGESGAGK	2	DQAVMISGESGAGK2	108706	104399	88489.3
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	DQCEDIDECEHR	DQC(UniMod:4)EDIDEC(UniMod:4)EHR	2	DQC(UniMod:4)EDIDEC(UniMod:4)EHR2	77276	76908	84773.6
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	DQCEDIDECEHR	DQC(UniMod:4)EDIDEC(UniMod:4)EHR	3	DQC(UniMod:4)EDIDEC(UniMod:4)EHR3	461088	584518	543971
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	DQCFAQHK	DQC(UniMod:4)FAQHK	2	DQC(UniMod:4)FAQHK2			4415.17
D3ZHK4	D3ZHK4	D3ZHK4_RAT	Rb1cc1	RB1-inducible coiled-coil 1	1	DQCISELISR	DQC(UniMod:4)ISELISR	2	DQC(UniMod:4)ISELISR2	5488.82		3055.9
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	DQCIVDDITYNVNDTFHK	DQC(UniMod:4)IVDDITYNVNDTFHK	3	DQC(UniMod:4)IVDDITYNVNDTFHK3	188137	241813	211751
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	DQCLEER	DQC(UniMod:4)LEER	2	DQC(UniMod:4)LEER2	29735.3	22004.7	31648.1
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	DQCLSHLQQYAAAYQQHLTAYEQLTSEK	DQC(UniMod:4)LSHLQQYAAAYQQHLTAYEQLTSEK	4	DQC(UniMod:4)LSHLQQYAAAYQQHLTAYEQLTSEK4	8415.12	5758.33	6391.14
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	DQCPETCQFNSVCLSR	DQC(UniMod:4)PETC(UniMod:4)QFNSVC(UniMod:4)LSR	3	DQC(UniMod:4)PETC(UniMod:4)QFNSVC(UniMod:4)LSR3		1980.02	3376.35
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	DQDDEDRELIMK	DQDDEDRELIMK	3	DQDDEDRELIMK3	14374.8	10273.7	21881.4
A0A8I6AAA9	A0A8I6AAA9	A0A8I6AAA9_RAT	Lrch1	Leucine rich repeats and calponin homology domain containing 1	1	DQDLDIVMIEQLR	DQDLDIVMIEQLR	2	DQDLDIVMIEQLR2	1454.04	3944.9	2672.83
G3V6A9	G3V6A9	G3V6A9_RAT	Mfap4	Microfibril-associated glycoprotein 4-like	1	DQDLFVQNCAALSSGAFWFR	DQDLFVQNC(UniMod:4)AALSSGAFWFR	3	DQDLFVQNC(UniMod:4)AALSSGAFWFR3	47245.2	41810.8	26940.4
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	DQDNAIIRPLPR	DQDNAIIRPLPR	3	DQDNAIIRPLPR3	25818.9	21992.9	22717.6
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	DQDNMQAELNR	DQDNMQAELNR	2	DQDNMQAELNR2	90314.1	104614	89063.1
A0A0G2JZL1	A0A0G2JZL1	A0A0G2JZL1_RAT	AABR07065808.1	Ig-like domain-containing protein	1	DQDTATYYCTR	DQDTATYYC(UniMod:4)TR	2	DQDTATYYC(UniMod:4)TR2	4731.14	4686.44	3201.41
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	DQDVEPGAPSMGAK	DQDVEPGAPSMGAK	2	DQDVEPGAPSMGAK2	117728	118061	125190
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	DQDVEPGAPSMGAK	DQDVEPGAPSMGAK	3	DQDVEPGAPSMGAK3	2034.2		10245.5
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	DQDVPVKR	DQDVPVKR	2	DQDVPVKR2	30647.9	44618.7	
Q3ZBA0	Q3ZBA0	TCPR1_RAT	Tecpr1	Tectonin beta-propeller repeat-containing protein 1	1	DQEAHGPGPVCC	DQEAHGPGPVC(UniMod:4)C(UniMod:4)	2	DQEAHGPGPVC(UniMod:4)C(UniMod:4)2		2189.82	5667.41
Q9R1T3	Q9R1T3	CATZ_RAT	Ctsz	Cathepsin Z	1	DQECDKFNQCGTCTEFK	DQEC(UniMod:4)DKFNQC(UniMod:4)GTC(UniMod:4)TEFK	3	DQEC(UniMod:4)DKFNQC(UniMod:4)GTC(UniMod:4)TEFK3	12626.9	13222.1	10865.5
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	DQECTIPICEGPDACK	DQEC(UniMod:4)TIPIC(UniMod:4)EGPDAC(UniMod:4)K	2	DQEC(UniMod:4)TIPIC(UniMod:4)EGPDAC(UniMod:4)K2	98350.8	113425	107860
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	DQECTIPICEGPDACK	DQEC(UniMod:4)TIPIC(UniMod:4)EGPDAC(UniMod:4)K	3	DQEC(UniMod:4)TIPIC(UniMod:4)EGPDAC(UniMod:4)K3	19946	19142	11102.9
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	DQECTIPICEGPDACKK	DQEC(UniMod:4)TIPIC(UniMod:4)EGPDAC(UniMod:4)KK	3	DQEC(UniMod:4)TIPIC(UniMod:4)EGPDAC(UniMod:4)KK3	9685.1	10105.6	10288.5
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	DQEDTPNQR	DQEDTPNQR	2	DQEDTPNQR2			4630.29
O35094	O35094	TIM44_RAT	Timm44	Mitochondrial import inner membrane translocase subunit TIM44	1	DQEELNPYAAWR	DQEELNPYAAWR	2	DQEELNPYAAWR2	3418.83	9398.12	7110.6
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	DQEFTVK	DQEFTVK	1	DQEFTVK1	52525.5	45682.1	41459.6
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	DQEFTVK	DQEFTVK	2	DQEFTVK2	2.73416e+06	2.69519e+06	3.09787e+06
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	DQEGIVVLK	DQEGIVVLK	2	DQEGIVVLK2	8770.09	2975.19	
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	DQEGNPLLR	DQEGNPLLR	2	DQEGNPLLR2	12034.2	10406.9	9240.3
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	DQEGQDVLLFIDNIFR	DQEGQDVLLFIDNIFR	2	DQEGQDVLLFIDNIFR2		25148.2	26145.8
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	DQEGQDVLLFIDNIFR	DQEGQDVLLFIDNIFR	3	DQEGQDVLLFIDNIFR3	4991.92		
P14056	P14056	ARAF_RAT	Araf	Serine/threonine-protein kinase A-Raf	1	DQEHFSFPAPANPPLQR	DQEHFSFPAPANPPLQR	3	DQEHFSFPAPANPPLQR3	48607.2	55155.8	53520.9
A0A8I6A9T1	A0A8I6A9T1	A0A8I6A9T1_RAT	Traf7	TNF receptor associated factor 7	1	DQEIAFLR	DQEIAFLR	2	DQEIAFLR2	6899.34	7929.14	7015.65
Q9Z2X5	Q9Z2X5	HOME3_RAT	Homer3	Homer protein homolog 3	1	DQEIQTLK	DQEIQTLK	2	DQEIQTLK2	22909.3	24707.8	17139.5
D3ZZ21	D3ZZ21	D3ZZ21_RAT	Ndufb6	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6	1	DQELSPR	DQELSPR	2	DQELSPR2	156492	211213	176432
Q5XHY5	Q5XHY5	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	1	DQELYFFHELSPGSCFFLPK	DQELYFFHELSPGSC(UniMod:4)FFLPK	3	DQELYFFHELSPGSC(UniMod:4)FFLPK3	4880.07	8261.46	
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	DQEPGAFIIR	DQEPGAFIIR	2	DQEPGAFIIR2	18862	12823.7	18583.9
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	DQEPIPQNIDR	DQEPIPQNIDR	2	DQEPIPQNIDR2	56954.1	67645.2	69334.5
Q62921	Q62921	HOIL1_RAT	Rbck1	RanBP-type and C3HC4-type zinc finger-containing protein 1	1	DQETLHSHGIR	DQETLHSHGIR	3	DQETLHSHGIR3		8931.08	6935.86
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	DQFALAFHLINQK	DQFALAFHLINQK	2	DQFALAFHLINQK2	16643.7	11482.9	14555.2
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	DQFALAFHLINQK	DQFALAFHLINQK	3	DQFALAFHLINQK3	55503	54684.5	55156.1
Q8VII0	Q8VII0	FRMD6_RAT	Frmd6	FERM domain-containing protein 6 (Fragment)	1	DQFALTASEAYLK	DQFALTASEAYLK	2	DQFALTASEAYLK2	4291.48	7589.06	5305.1
P18395	P18395	CSDE1_RAT	Csde1	Cold shock domain-containing protein E1	1	DQFGFINYEVGDSKK	DQFGFINYEVGDSKK	3	DQFGFINYEVGDSKK3	3128.1	6229.99	6299.02
P26431	P26431;P48763	SL9A1_RAT	Slc9a1	Sodium/hydrogen exchanger 1	0	DQFIIAYGGLR	DQFIIAYGGLR	2	DQFIIAYGGLR2	37776.8	24939.4	35371.1
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	DQFQAALGK	DQFQAALGK	1	DQFQAALGK1	1.87314e+06	2.03268e+06	2.03822e+06
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	DQFQAALGK	DQFQAALGK	2	DQFQAALGK2	407203	551804	135135
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	DQGEEEEGSGQETETR	DQGEEEEGSGQETETR	2	DQGEEEEGSGQETETR2	5347.39		1490.76
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DQGELER	DQGELER	2	DQGELER2	30500.1	18872.8	26379
A0A8J8YFS5	A0A8J8YFS5	A0A8J8YFS5_RAT	Hars1	Histidine--tRNA ligase, cytoplasmic	1	DQGGELLSLR	DQGGELLSLR	2	DQGGELLSLR2	8086.2	5992.42	9171.65
A0A8I5ZRG3	A0A8I5ZRG3	A0A8I5ZRG3_RAT	Frmd4b	FERM domain containing 4B	1	DQGHSPQTSFDSDR	DQGHSPQTSFDSDR	2	DQGHSPQTSFDSDR2	3827.78	3918.96	2158.07
A0A8I5ZRG3	A0A8I5ZRG3	A0A8I5ZRG3_RAT	Frmd4b	FERM domain containing 4B	1	DQGHSPQTSFDSDR	DQGHSPQTSFDSDR	3	DQGHSPQTSFDSDR3	10262	11675.9	9590.91
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	DQGINIR	DQGINIR	2	DQGINIR2	283592	313724	324795
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	DQGLSIMVSGK	DQGLSIMVSGK	2	DQGLSIMVSGK2	6643.28	12242.9	
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	DQGLYINDSSGK	DQGLYINDSSGK	2	DQGLYINDSSGK2	107466	87298.1	111084
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	DQGNDSVSTAPR	DQGNDSVSTAPR	2	DQGNDSVSTAPR2	39220	38795.7	31987.9
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	DQGPDVLLAK	DQGPDVLLAK	2	DQGPDVLLAK2	365488	288695	354800
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	DQGPNVCALQQILGTK	DQGPNVC(UniMod:4)ALQQILGTK	2	DQGPNVC(UniMod:4)ALQQILGTK2	20059.2	12816.4	16348.2
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	DQGPNVCALQQILGTK	DQGPNVC(UniMod:4)ALQQILGTK	3	DQGPNVC(UniMod:4)ALQQILGTK3			5066.75
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	DQGSGFCVTGK	DQGSGFC(UniMod:4)VTGK	2	DQGSGFC(UniMod:4)VTGK2	16116.9	17862.7	15822.1
Q64119	Q64119	MYL6_RAT	Myl6	Myosin light polypeptide 6	1	DQGTYEDYVEGLR	DQGTYEDYVEGLR	2	DQGTYEDYVEGLR2	17560.8	7804.41	13673.1
Q64119	Q64119	MYL6_RAT	Myl6	Myosin light polypeptide 6	1	DQGTYEDYVEGLR	DQGTYEDYVEGLR	3	DQGTYEDYVEGLR3	171583	195575	194980
Q64119	Q64119	MYL6_RAT	Myl6	Myosin light polypeptide 6	1	DQGTYEDYVEGLRVFDK	DQGTYEDYVEGLRVFDK	3	DQGTYEDYVEGLRVFDK3		4305.66	
O88339	Q4V882;O88339	EPN1_RAT	Epn1	Epsin-1	0	DQGVNVR	DQGVNVR	2	DQGVNVR2		41276.2	
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	DQHCNSEVAKPR	DQHC(UniMod:4)NSEVAKPR	3	DQHC(UniMod:4)NSEVAKPR3			29578.6
Q505J8	Q505J8	SYFA_RAT	Farsa	Phenylalanine--tRNA ligase alpha subunit	1	DQHDTFFLRDPAEALQLPMDYVQR	DQHDTFFLRDPAEALQLPMDYVQR	4	DQHDTFFLRDPAEALQLPMDYVQR4	24601.9	17267.9	24025.4
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	DQHLLLGAEEGIFILNR	DQHLLLGAEEGIFILNR	3	DQHLLLGAEEGIFILNR3	10693.5	15063.9	17694.1
G3V7E6	G3V7E6	G3V7E6_RAT	Pcm1	Pericentriolar material 1	1	DQHLNNSSFVPSTSLPR	DQHLNNSSFVPSTSLPR	3	DQHLNNSSFVPSTSLPR3	10763.6	9428.99	10809.9
Q66H09	Q66H09	Q66H09_RAT	Ttc1	Tetratricopeptide repeat domain 1	1	DQHVQSKPLK	DQHVQSKPLK	3	DQHVQSKPLK3			10227.7
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	DQIIDSLK	DQIIDSLK	2	DQIIDSLK2	18377.4	16519.2	13179
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	DQIIELDQTGNQLK	DQIIELDQTGNQLK	2	DQIIELDQTGNQLK2	23166.9	18890.7	15646.7
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	DQIIELDQTGNQLK	DQIIELDQTGNQLK	3	DQIIELDQTGNQLK3	2227.87		
P14056	A0A8I6ATH0;P14056;P11345	ARAF_RAT	Araf	Serine/threonine-protein kinase A-Raf	0	DQIIFMVGR	DQIIFMVGR	2	DQIIFMVGR2	18560.2	25596.3	18633.9
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	DQILADSR	DQILADSR	2	DQILADSR2	46540.5	39393.6	51694.4
Q91Y81	Q91Y81	SEPT2_RAT	Septin2	Septin-2	1	DQILLEK	DQILLEK	1	DQILLEK1	891.963	2250.95	
Q91Y81	Q91Y81	SEPT2_RAT	Septin2	Septin-2	1	DQILLEK	DQILLEK	2	DQILLEK2	131094	108448	99754.3
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	DQISVLPNEQDLAR	DQISVLPNEQDLAR	2	DQISVLPNEQDLAR2	51534.3	48386.2	47033.4
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	DQISVLPNEQDLAREEAQK	DQISVLPNEQDLAREEAQK	3	DQISVLPNEQDLAREEAQK3	37537.8	24066.9	30538.3
P51583	P51583	PUR6_RAT	Paics	Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase	1	DQITAGNAAR	DQITAGNAAR	2	DQITAGNAAR2	100369	85016.9	84019.2
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	DQITCISK	DQITC(UniMod:4)ISK	1	DQITC(UniMod:4)ISK1	1592.33	3041.97	5471.67
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	DQITCISK	DQITC(UniMod:4)ISK	2	DQITC(UniMod:4)ISK2	524452	633906	574623
Q6P3V8	A0A8I6GF11;Q6P3V8	Q6P3V8_RAT	Eif4a1	ATP-dependent RNA helicase	0	DQIYDIFQK	DQIYDIFQK	2	DQIYDIFQK2	170891	119001	112556
Q99N37	Q99N37	RHG17_RAT	Arhgap17	Rho GTPase-activating protein 17	1	DQLAADMYNFMAK	DQLAADMYNFMAK	2	DQLAADMYNFMAK2	13377.7	19852.3	10185.1
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	DQLAEELSVLR	DQLAEELSVLR	2	DQLAEELSVLR2		3530.41	3046.5
Q9QYU2	Q9QYU2	EFTS_RAT	Tsfm	Elongation factor Ts, mitochondrial	1	DQLALAIGTLGENMSLK	DQLALAIGTLGENMSLK	2	DQLALAIGTLGENMSLK2	13091.4	11043.8	13290.8
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	DQLCEMENLR	DQLC(UniMod:4)EMENLR	2	DQLC(UniMod:4)EMENLR2	1666.62		5388.14
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	DQLDETVNVEPLTK	DQLDETVNVEPLTK	2	DQLDETVNVEPLTK2	69449.7	62376.5	79713.8
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	DQLDETVNVEPLTK	DQLDETVNVEPLTK	3	DQLDETVNVEPLTK3	4940.93		1433.38
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	DQLEDLKK	DQLEDLKK	2	DQLEDLKK2	32050.9	34835.2	35820.6
Q5FVM3	Q5FVM3	RETR1_RAT	Retreg1	Reticulophagy regulator 1	1	DQLEGAR	DQLEGAR	2	DQLEGAR2	134037	98325.1	
G3V8Y8	G3V8Y8	G3V8Y8_RAT	Hip1	Huntingtin interacting protein 1	1	DQLESTQLK	DQLESTQLK	2	DQLESTQLK2	4917.58	6636.35	5653.02
A0A8I5ZXL6	A0A8I5ZXL6	A0A8I5ZXL6_RAT	Plekha7	Pleckstrin homology domain containing A7	1	DQLESVLEVLHR	DQLESVLEVLHR	2	DQLESVLEVLHR2	1848.34		
A0A8I5ZXL6	A0A8I5ZXL6	A0A8I5ZXL6_RAT	Plekha7	Pleckstrin homology domain containing A7	1	DQLESVLEVLHR	DQLESVLEVLHR	3	DQLESVLEVLHR3	3681.92	2091.12	3293.81
A0A0G2K2Z2	A0A0G2K2Z2	A0A0G2K2Z2_RAT	Inpp5k	Inositol polyphosphate-5-phosphatase K	1	DQLFIAK	DQLFIAK	2	DQLFIAK2	107140	94472.2	104352
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	DQLIDMK	DQLIDMK	1	DQLIDMK1	901244	856872	926374
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	DQLIDMK	DQLIDMK	2	DQLIDMK2	2.71739e+07	2.39758e+07	2.61411e+07
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	DQLIDMKR	DQLIDMKR	2	DQLIDMKR2	37821.2	61081.5	40554.6
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	DQLINELK	DQLINELK	2	DQLINELK2	13239.6	9792.24	19333.4
P04642	P04642;A0A8I6ASS6;A0A8I6A2A3;A0A8I6GK09	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	DQLIVNLLK	DQLIVNLLK	2	DQLIVNLLK2	1.24277e+06	885644	881553
P04642	P04642;A0A8I6ASS6;A0A8I6A2A3;A0A8I6GK09	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	DQLIVNLLKEEQVPQNK	DQLIVNLLKEEQVPQNK	3	DQLIVNLLKEEQVPQNK3	109553	73938.1	103222
Q63616	Q63616	VP33B_RAT	Vps33b	Vacuolar protein sorting-associated protein 33B	1	DQLIYLLEQLPGK	DQLIYLLEQLPGK	2	DQLIYLLEQLPGK2		3855.08	8588.01
Q63616	Q63616	VP33B_RAT	Vps33b	Vacuolar protein sorting-associated protein 33B	1	DQLIYLLEQLPGKK	DQLIYLLEQLPGKK	3	DQLIYLLEQLPGKK3	9271.49	9622.85	8062.66
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DQLLAAK	DQLLAAK	1	DQLLAAK1	12235.1	7702.62	10299.7
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	DQLLEASAATR	DQLLEASAATR	2	DQLLEASAATR2	8891.23	8492.82	10375.1
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	DQLLLGPTYATPK	DQLLLGPTYATPK	2	DQLLLGPTYATPK2	360185	380791	380423
F1M9Q3	F1M9Q3	F1M9Q3_RAT	Ltn1	E3 ubiquitin-protein ligase listerin	1	DQLLSHK	DQLLSHK	2	DQLLSHK2	9614.28	15444.9	8915.33
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	DQLMFDLLK	DQLMFDLLK	2	DQLMFDLLK2	18058.7	20563.4	23495.7
Q5BJT7	Q5BJT7	CCD93_RAT	Ccdc93	Coiled-coil domain-containing protein 93	1	DQLNDQYLELLEK	DQLNDQYLELLEK	2	DQLNDQYLELLEK2	8170.64	4399.82	4667.67
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	DQLNEMK	DQLNEMK	2	DQLNEMK2	58057.6	61562.4	53200.3
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	DQLNITLSK	DQLNITLSK	2	DQLNITLSK2	17296.1	22948.2	13912.9
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	DQLPADECNK	DQLPADEC(UniMod:4)NK	2	DQLPADEC(UniMod:4)NK2	27406.3	26890.7	43555.7
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	DQLPPLPR	DQLPPLPR	2	DQLPPLPR2	54078.2	61914.5	41155.6
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	DQLQLSCTELR	DQLQLSC(UniMod:4)TELR	2	DQLQLSC(UniMod:4)TELR2	148193	154642	175509
Q68G38	Q68G38	TOR1A_RAT	Tor1a	Torsin-1A	1	DQLQMWIR	DQLQMWIR	2	DQLQMWIR2	8542.46	13300.5	4628.1
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	DQLQQAQEER	DQLQQAQEER	2	DQLQQAQEER2	20268.3	12991.4	16731.8
P85515	P85515	ACTZ_RAT	Actr1a	Alpha-centractin	1	DQLQTFSEEHPVLLTEAPLNPR	DQLQTFSEEHPVLLTEAPLNPR	3	DQLQTFSEEHPVLLTEAPLNPR3	340735	260265	378723
P85515	P85515	ACTZ_RAT	Actr1a	Alpha-centractin	1	DQLQTFSEEHPVLLTEAPLNPR	DQLQTFSEEHPVLLTEAPLNPR	4	DQLQTFSEEHPVLLTEAPLNPR4	11320.1	17696.7	17030.5
F7F067	F7F067	F7F067_RAT	Actr1b	Actin related protein 1B	1	DQLQTFSEEHPVLLTEAPLNPSK	DQLQTFSEEHPVLLTEAPLNPSK	3	DQLQTFSEEHPVLLTEAPLNPSK3	32691.3	43071.4	46047.4
O35462	O35462	ANGP2_RAT	Angpt2	Angiopoietin-2	1	DQLQVLVSK	DQLQVLVSK	2	DQLQVLVSK2	6929.46	11162.8	12023.4
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	DQLVLNIEALK	DQLVLNIEALK	2	DQLVLNIEALK2	10352.1	9307.18	5257.77
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	DQLVNDFGKPSSQK	DQLVNDFGKPSSQK	2	DQLVNDFGKPSSQK2	25073.2	20282.1	21830.9
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	DQLVNDFGKPSSQK	DQLVNDFGKPSSQK	3	DQLVNDFGKPSSQK3	218538	299419	268226
Q68FS3	Q68FS3	FBX7_RAT	Fbxo7	F-box only protein 7	1	DQLVYPLLAFTR	DQLVYPLLAFTR	2	DQLVYPLLAFTR2	4036.4	9323.56	
A0A8I6G6W8	A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	1	DQMEGSPNTSESFEHMAR	DQMEGSPNTSESFEHMAR	3	DQMEGSPNTSESFEHMAR3	18733.4	23201.3	21003
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	DQMEYMLQNHVFPLFSSELGYMR	DQMEYMLQNHVFPLFSSELGYMR	3	DQMEYMLQNHVFPLFSSELGYMR3	10765.2		9012.63
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	DQMLQVQNSTEPDPLLATLEK	DQMLQVQNSTEPDPLLATLEK	3	DQMLQVQNSTEPDPLLATLEK3	50196.4	52215.7	52554.4
Q63635	Q63635	STX6_RAT	Stx6	Syntaxin-6	1	DQMSASSVQALAER	DQMSASSVQALAER	2	DQMSASSVQALAER2	9858.11	9685.93	9427.47
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	DQMSHLFNVAHTLR	DQMSHLFNVAHTLR	3	DQMSHLFNVAHTLR3	9506.92	5538.14	9630.02
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	DQMSHLFNVAHTLR	DQMSHLFNVAHTLR	4	DQMSHLFNVAHTLR4	6920.41	4460.57	5800.5
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	DQMSMEGFSR	DQMSMEGFSR	2	DQMSMEGFSR2	36916.6	38724.4	41526.5
D4ACC1	D4ACC1	D4ACC1_RAT	Dapp1	Dual adaptor of phosphotyrosine and 3-phosphoinositides 1	1	DQMSPEPIR	DQMSPEPIR	2	DQMSPEPIR2	48017.1	44430.1	35936.3
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	DQMTEQR	DQMTEQR	2	DQMTEQR2			21247.5
Q6AYT7	Q6AYT7	ABD12_RAT	Abhd12	Lysophosphatidylserine lipase ABHD12	1	DQMWYEDALASNHPIILYLHGNAGTR	DQMWYEDALASNHPIILYLHGNAGTR	4	DQMWYEDALASNHPIILYLHGNAGTR4	8258.99		
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	DQNAEALDPR	DQNAEALDPR	2	DQNAEALDPR2	22970.1	17077.4	15393.1
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	DQNAEQIR	DQNAEQIR	2	DQNAEQIR2		12294.6	
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	DQNDHKYPFDR	DQNDHKYPFDR	3	DQNDHKYPFDR3	6322.83	16472.1	10833
Q9QZG1	Q9QZG1	S22AN_RAT	Slc22a23	Solute carrier family 22 member 23	1	DQNLPENIANGEHYTR	DQNLPENIANGEHYTR	3	DQNLPENIANGEHYTR3		9813.63	11947.9
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	DQNTVETLQR	DQNTVETLQR	2	DQNTVETLQR2	646153	667928	698385
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	DQNTVETLQR	DQNTVETLQR	3	DQNTVETLQR3	8243.15	5393.94	2829.15
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	DQNVFVSQK	DQNVFVSQK	2	DQNVFVSQK2	6371.62	7856.7	11422.7
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	DQNVLSPVNCWNLLLNQVK	DQNVLSPVNC(UniMod:4)WNLLLNQVK	3	DQNVLSPVNC(UniMod:4)WNLLLNQVK3	3104.11	3311.46	
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	DQNVLSPVNCWNLLLNQVKRESR	DQNVLSPVNC(UniMod:4)WNLLLNQVKRESR	3	DQNVLSPVNC(UniMod:4)WNLLLNQVKRESR3	40931.1	12163.4	
A0A8I5ZRT6	A0A8I5ZRT6	A0A8I5ZRT6_RAT	Dock2	Dedicator of cytokinesis 2	1	DQPDYGIYSR	DQPDYGIYSR	2	DQPDYGIYSR2	3461.51		
Q9WVH8	Q9WVH8	FBLN5_RAT	Fbln5	Fibulin-5	1	DQPFTILFR	DQPFTILFR	2	DQPFTILFR2	1.47108e+06	1.60457e+06	1.56507e+06
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	DQPGEPVTEFSCR	DQPGEPVTEFSC(UniMod:4)R	2	DQPGEPVTEFSC(UniMod:4)R2	169411	182748	160305
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	DQPGQAPMR	DQPGQAPMR	2	DQPGQAPMR2	30736.7	37342.2	23558.8
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	DQPHTVSIQSSEMIATNTR	DQPHTVSIQSSEMIATNTR	3	DQPHTVSIQSSEMIATNTR3	10295.8	9595.21	8393.29
A0A0G2JXI6	A0A0G2JXI6	A0A0G2JXI6_RAT	Cyrib	CYFIP related Rac1 interactor B	1	DQPPNSVEGLLNALR	DQPPNSVEGLLNALR	2	DQPPNSVEGLLNALR2	6506.52	4432.94	3889.94
A0A0G2JXI6	A0A0G2JXI6	A0A0G2JXI6_RAT	Cyrib	CYFIP related Rac1 interactor B	1	DQPPNSVEGLLNALR	DQPPNSVEGLLNALR	3	DQPPNSVEGLLNALR3	7112.71	3718.19	5857.57
F7FJT3	F7FJT3	F7FJT3_RAT	Rad23a	UV excision repair protein RAD23	1	DQPQFQNMR	DQPQFQNMR	2	DQPQFQNMR2	153389	160838	203998
P31720	P31720	C1QA_RAT	C1qa	Complement C1q subcomponent subunit A	1	DQPRPAFSAIR	DQPRPAFSAIR	3	DQPRPAFSAIR3	95299.5	109677	97627.7
A0A8I6G3S1	A0A8I6G3S1	A0A8I6G3S1_RAT	Mon1b	Vacuolar fusion protein MON1 homolog	1	DQPSSLLSPLPQAEAPSSTCEHWK	DQPSSLLSPLPQAEAPSSTC(UniMod:4)EHWK	3	DQPSSLLSPLPQAEAPSSTC(UniMod:4)EHWK3	4983.37	7984.2	4156.03
Q99P99	Q99P99	HDAC4_RAT	Hdac4	Histone deacetylase 4	1	DQPVELLNPAR	DQPVELLNPAR	2	DQPVELLNPAR2	5316.95	4079.59	2124.47
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	DQPYYDIPDAPYR	DQPYYDIPDAPYR	2	DQPYYDIPDAPYR2	14006.9	9000.21	15310.7
F1M3G7	F1M3G7	AKP13_RAT	Akap13	A-kinase anchor protein 13	1	DQQILLLLEEK	DQQILLLLEEK	2	DQQILLLLEEK2	2983.13	2068.76	1783.89
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	DQQLAALQQEHLDVIK	DQQLAALQQEHLDVIK	3	DQQLAALQQEHLDVIK3	9856.97	4244.74	8713.74
F7EWF8	F7EWF8	F7EWF8_RAT	Anapc2	Anaphase-promoting complex subunit 2	1	DQQLIYSAGVYR	DQQLIYSAGVYR	2	DQQLIYSAGVYR2	8693.67	8613.32	9837.84
B1H219	B1H219	B1H219_RAT	Dkk3	Dickkopf WNT signaling pathway inhibitor 3	1	DQQMLCTR	DQQMLC(UniMod:4)TR	2	DQQMLC(UniMod:4)TR2	718551	714073	662450
O08679	O08679	MARK2_RAT	Mark2	Serine/threonine-protein kinase MARK2	1	DQQNLPFGVTPASPSGHSQGR	DQQNLPFGVTPASPSGHSQGR	3	DQQNLPFGVTPASPSGHSQGR3	21327.4	19234.4	28040.1
F1M9D6	F1M9D6	F1M9D6_RAT	Stat1	Signal transducer and activator of transcription	1	DQQPGTFLLR	DQQPGTFLLR	2	DQQPGTFLLR2	19730.7	24177.8	21805.5
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	DQQPLALGQR	DQQPLALGQR	2	DQQPLALGQR2	17816.2	20271.1	16794.8
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	DQQQNEIIVK	DQQQNEIIVK	2	DQQQNEIIVK2	11009.8	6446.52	5491.94
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	DQQQRPLYHHFTTAINTENIR	DQQQRPLYHHFTTAINTENIR	3	DQQQRPLYHHFTTAINTENIR3	5898.31	8772	4584.56
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	DQQQRPLYHHFTTAINTENIR	DQQQRPLYHHFTTAINTENIR	4	DQQQRPLYHHFTTAINTENIR4	67722.9	79016.9	62083.5
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	DQQVTELSFSMTEK	DQQVTELSFSMTEK	2	DQQVTELSFSMTEK2	2717.99		
A0A8I5ZQE4	A0A8I5ZQE4	A0A8I5ZQE4_RAT	Supt5h	Transcription elongation factor SPT5	1	DQREEELGEYYMK	DQREEELGEYYMK	3	DQREEELGEYYMK3	7921.75	5259.3	
P83006	P83006	PAFA2_RAT	Pafah2	Platelet-activating factor acetylhydrolase 2, cytoplasmic	1	DQSAAATYFCK	DQSAAATYFC(UniMod:4)K	2	DQSAAATYFC(UniMod:4)K2	5800.02	5491.71	5151.18
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	DQSDFVGQTVELGELR	DQSDFVGQTVELGELR	2	DQSDFVGQTVELGELR2	32850.5	34830.6	28362.6
A0A8I5ZLW0	A0A8I5ZLW0	A0A8I5ZLW0_RAT	Xaf1	XIAP associated factor 1	1	DQSGAVDLPLK	DQSGAVDLPLK	2	DQSGAVDLPLK2	5521.9	3289.13	
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	DQSLSHESIVK	DQSLSHESIVK	2	DQSLSHESIVK2	4127.07	7130.98	6132.42
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	DQSLSHESIVK	DQSLSHESIVK	3	DQSLSHESIVK3	34459.4	33879.5	44957.6
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	DQSQAADMLCVVVNNVER	DQSQAADMLC(UniMod:4)VVVNNVER	3	DQSQAADMLC(UniMod:4)VVVNNVER3	92409.5	82616.8	83976.2
P51111	P51111	HD_RAT	Htt	Huntingtin	1	DQSSVYLK	DQSSVYLK	2	DQSSVYLK2	41094	51152.3	49891
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	DQSTEQTPSDLSQR	DQSTEQTPSDLSQR	2	DQSTEQTPSDLSQR2	5888.66	5007.09	3490.52
Q5M9G9	Q5M9G9	FAKD4_RAT	Tbrg4	FAST kinase domain-containing protein 4	1	DQSTFQK	DQSTFQK	2	DQSTFQK2		13135.3	
P0C2X9	P0C2X9	AL4A1_RAT	Aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1	DQTEAIPCVVGDEEVWTSDVR	DQTEAIPC(UniMod:4)VVGDEEVWTSDVR	3	DQTEAIPC(UniMod:4)VVGDEEVWTSDVR3	11546.2	9403.6	12356.4
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	DQTEQILHDIR	DQTEQILHDIR	3	DQTEQILHDIR3	7291.52	11397.3	
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	DQTLSPTIISGLHSIAR	DQTLSPTIISGLHSIAR	2	DQTLSPTIISGLHSIAR2	13961.4	7895.95	
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	DQTLSPTIISGLHSIAR	DQTLSPTIISGLHSIAR	3	DQTLSPTIISGLHSIAR3	42608.5	43609	60084.4
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	DQTNDQVTIDSALATQK	DQTNDQVTIDSALATQK	2	DQTNDQVTIDSALATQK2	23563.8	20642.1	19309.7
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	DQTNDQVTIDSALATQK	DQTNDQVTIDSALATQK	3	DQTNDQVTIDSALATQK3	22416.1	16881.8	21090.4
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	DQTPLAVYNSISYK	DQTPLAVYNSISYK	2	DQTPLAVYNSISYK2	3515.44	8452.55	4636.8
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	DQVANSAFVER	DQVANSAFVER	2	DQVANSAFVER2	1.26918e+06	1.43498e+06	1.44903e+06
F7FQB8	F7FQB8	F7FQB8_RAT	Kpna4	Karyopherin subunit alpha 4	1	DQVAYLIQQNVIPPFCNLLTVK	DQVAYLIQQNVIPPFC(UniMod:4)NLLTVK	3	DQVAYLIQQNVIPPFC(UniMod:4)NLLTVK3	13658.3	11378.6	7361.43
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	DQVDSAVQELLQLK	DQVDSAVQELLQLK	2	DQVDSAVQELLQLK2	35196.4	40348.9	46866.1
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	DQVDSAVQELLQLK	DQVDSAVQELLQLK	3	DQVDSAVQELLQLK3	8891.44	10832.2	12483.1
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	DQVDSYSLEAK	DQVDSYSLEAK	2	DQVDSYSLEAK2	176020	183252	205241
A0A8I5ZWC6	A0A8I5ZWC6	A0A8I5ZWC6_RAT	Kpna3	Importin subunit alpha	1	DQVEYLVQQNVIPPFCNLLSVK	DQVEYLVQQNVIPPFC(UniMod:4)NLLSVK	3	DQVEYLVQQNVIPPFC(UniMod:4)NLLSVK3	14226	11045.1	5098.93
A0A8I6A282	A0A8I6A282	A0A8I6A282_RAT	Antxr2	Anthrax toxin receptor	1	DQVFPVK	DQVFPVK	2	DQVFPVK2	58111.9	47775.1	71792.9
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	DQVFTYNGANR	DQVFTYNGANR	2	DQVFTYNGANR2	14718.1	14481.9	15842.8
D3ZER6	D3ZER6	D3ZER6_RAT	Tnpo2	Transportin 2	1	DQVGEENWQQFSEQFPPLLK	DQVGEENWQQFSEQFPPLLK	3	DQVGEENWQQFSEQFPPLLK3	5520.15	2832.04	8756.28
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	DQVGGFSCK	DQVGGFSC(UniMod:4)K	2	DQVGGFSC(UniMod:4)K2	189031	199392	173577
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	DQVIYPDGK	DQVIYPDGK	2	DQVIYPDGK2	31468.6	42125.7	33852.6
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	DQVIYPDGKEDQK	DQVIYPDGKEDQK	2	DQVIYPDGKEDQK2	3648.31		2828.69
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	DQVIYPDGKEDQK	DQVIYPDGKEDQK	3	DQVIYPDGKEDQK3	7876.67	8628	11465.7
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	DQVIYPDGKEDQKK	DQVIYPDGKEDQKK	2	DQVIYPDGKEDQKK2	1465.05	1563.92	4122.73
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	DQVIYPDGKEDQKK	DQVIYPDGKEDQKK	3	DQVIYPDGKEDQKK3	36530.5	29346.3	18524.7
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	DQVIYPDGKEDQKK	DQVIYPDGKEDQKK	4	DQVIYPDGKEDQKK4	23716.1	26722.7	23038.7
D3ZHR2	D3ZHR2	ABCD1_RAT	Abcd1	ATP-binding cassette sub-family D member 1	1	DQVIYPDSAEDMRR	DQVIYPDSAEDMRR	3	DQVIYPDSAEDMRR3		14707.3	10951.1
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	DQVLAMLEK	DQVLAMLEK	2	DQVLAMLEK2	159681	156588	138942
Q6IE70	Q6IE70	PAN2_RAT	Pan2	PAN2-PAN3 deadenylation complex catalytic subunit Pan2	1	DQVLDTVYLFHMPR	DQVLDTVYLFHMPR	3	DQVLDTVYLFHMPR3	1990.09	5278.08	4090.06
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	DQVLHEHIQR	DQVLHEHIQR	2	DQVLHEHIQR2	712.538	2853.45	1300.63
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	DQVLHEHIQR	DQVLHEHIQR	3	DQVLHEHIQR3	227631	211131	144772
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	DQVLISCDTGYK	DQVLISC(UniMod:4)DTGYK	2	DQVLISC(UniMod:4)DTGYK2	2.57051e+06	343485	3.04978e+06
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	DQVLQLVYENGSPCPSK	DQVLQLVYENGSPC(UniMod:4)PSK	2	DQVLQLVYENGSPC(UniMod:4)PSK2	3153.44	4697.77	2466.48
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	DQVLQLVYENGSPCPSK	DQVLQLVYENGSPC(UniMod:4)PSK	3	DQVLQLVYENGSPC(UniMod:4)PSK3		5249.02	8259.82
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	DQVLQNLGSVESYSEEK	DQVLQNLGSVESYSEEK	2	DQVLQNLGSVESYSEEK2	31465.8	47117.5	32692.9
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	DQVLQNLGSVESYSEEK	DQVLQNLGSVESYSEEK	3	DQVLQNLGSVESYSEEK3		4804.55	
F1M9D6	F1M9D6	F1M9D6_RAT	Stat1	Signal transducer and activator of transcription	1	DQVMCIEHEIK	DQVMC(UniMod:4)IEHEIK	3	DQVMC(UniMod:4)IEHEIK3	12681.1	16257.2	16149
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	DQVMLALK	DQVMLALK	2	DQVMLALK2	35008.5	21621.3	21972.5
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	DQVQEAPSGQA	DQVQEAPSGQA	2	DQVQEAPSGQA2	5902.87	9337.39	8254.58
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	DQVTATWDK	DQVTATWDK	2	DQVTATWDK2	50632.3	45889.6	60305.1
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	DQVTTLEVHVCDCEGTVNNCMK	DQVTTLEVHVC(UniMod:4)DC(UniMod:4)EGTVNNC(UniMod:4)MK	3	DQVTTLEVHVC(UniMod:4)DC(UniMod:4)EGTVNNC(UniMod:4)MK3	269330	332331	315798
A0A8I6ASC6	A0A8I6ASC6	A0A8I6ASC6_RAT	Igdcc4	Immunoglobulin superfamily, DCC subclass, member 4	1	DQVTVTEEPR	DQVTVTEEPR	2	DQVTVTEEPR2	26857.9	16755.4	22395.7
O70540	O70540	MADCA_RAT	Madcam1	Mucosal addressin cell adhesion molecule 1	1	DQVVSCTAHNIWPAGPDSLSFALLR	DQVVSC(UniMod:4)TAHNIWPAGPDSLSFALLR	3	DQVVSC(UniMod:4)TAHNIWPAGPDSLSFALLR3	7279.01	23759.4	24919.2
P17164	P17164	FUCO_RAT	Fuca1	Tissue alpha-L-fucosidase	1	DQVVVNDR	DQVVVNDR	2	DQVVVNDR2	39570.1	36510.2	35346.1
A0A0G2JZC4	A0A0G2JZC4	A0A0G2JZC4_RAT	Sema6d	Semaphorin 6D	1	DQVYTVNLNDIPQTEVIPSKK	DQVYTVNLNDIPQTEVIPSKK	3	DQVYTVNLNDIPQTEVIPSKK3	8292.34	7732.92	7653.88
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	DQWYLVGVVSWGEDCGKK	DQWYLVGVVSWGEDC(UniMod:4)GKK	3	DQWYLVGVVSWGEDC(UniMod:4)GKK3	1121.86	3337.32	4458.6
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	DQYAENLK	DQYAENLK	2	DQYAENLK2	100390	110316	123486
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	DQYELLCLDNTR	DQYELLC(UniMod:4)LDNTR	2	DQYELLC(UniMod:4)LDNTR2	53454.8	35017.9	42409.4
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	DQYELLCPDNTR	DQYELLC(UniMod:4)PDNTR	2	DQYELLC(UniMod:4)PDNTR2	11245	14096.4	6383.85
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	DQYFIQR	DQYFIQR	2	DQYFIQR2	58010.3	64578.2	75130.8
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	DQYGDVVHVPNMK	DQYGDVVHVPNMK	2	DQYGDVVHVPNMK2	5033.53	1632.95	2885.81
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	DQYGDVVHVPNMK	DQYGDVVHVPNMK	3	DQYGDVVHVPNMK3	19661.5	29562.2	17603.9
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	DQYISVLQTQVSLLK	DQYISVLQTQVSLLK	2	DQYISVLQTQVSLLK2	4764.22	3616.57	
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	DQYLLSPVNCWYLVLHQTR	DQYLLSPVNC(UniMod:4)WYLVLHQTR	3	DQYLLSPVNC(UniMod:4)WYLVLHQTR3	19365.1	27680.3	16243.7
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	DQYLLTALELHTELLESGR	DQYLLTALELHTELLESGR	3	DQYLLTALELHTELLESGR3	2050.1	2047.84	
Q63787	Q63787	P85A_RAT	Pik3r1	Phosphatidylinositol 3-kinase regulatory subunit alpha	1	DQYLMWLTQK	DQYLMWLTQK	2	DQYLMWLTQK2	9118.49	4816.42	
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	DQYNLLK	DQYNLLK	1	DQYNLLK1	10835.3	14358	8906.14
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	DQYNLLK	DQYNLLK	2	DQYNLLK2	293248	351438	309792
Q499P3	Q499P3	C1GLC_RAT	C1galt1c1	C1GALT1-specific chaperone 1	1	DQYNWFFLAR	DQYNWFFLAR	2	DQYNWFFLAR2	13299.4	16671.9	12943.2
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	DQYSVIFESGDR	DQYSVIFESGDR	2	DQYSVIFESGDR2	13836.8	16419.9	22238.6
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	DQYYNIDVPTR	DQYYNIDVPTR	2	DQYYNIDVPTR2	443642	436871	450250
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	DQYYNIDVPTR	DQYYNIDVPTR	3	DQYYNIDVPTR3	17678.5	24102.5	28801.2
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	DRAFESTLK	DRAFESTLK	2	DRAFESTLK2	12729.3	11797.2	18677.5
Q4KLF8	Q4KLF8	ARPC5_RAT	Arpc5	Actin-related protein 2/3 complex subunit 5	1	DRAGSIVLK	DRAGSIVLK	2	DRAGSIVLK2	8756.21	5896.54	9884.52
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	DRAQALSDR	DRAQALSDR	2	DRAQALSDR2	153536	184436	171497
Q7TSA0	Q7TSA0	MIRO2_RAT	Rhot2	Mitochondrial Rho GTPase 2	1	DRDAPEKLPTHTINTVR	DRDAPEKLPTHTINTVR	4	DRDAPEKLPTHTINTVR4	2666.69	3854.16	1272.39
P51799	P51799	CLCN7_RAT	Clcn7	H(+)/Cl(-) exchange transporter 7	1	DRDDEEGAPLLR	DRDDEEGAPLLR	3	DRDDEEGAPLLR3	12556.9	14074.1	13262.3
D3Z8L7	D3Z8L7	RRAS_RAT	Rras	Ras-related protein R-Ras	1	DRDDFPIVLVGNK	DRDDFPIVLVGNK	2	DRDDFPIVLVGNK2	2714.34		
D3Z8L7	D3Z8L7	RRAS_RAT	Rras	Ras-related protein R-Ras	1	DRDDFPIVLVGNK	DRDDFPIVLVGNK	3	DRDDFPIVLVGNK3	92974.3	76863.4	80696.8
Q923V4	Q923V4	FBX6_RAT	Fbxo6	F-box only protein 6	1	DRDEPVDDWK	DRDEPVDDWK	2	DRDEPVDDWK2	11438.3	11762.2	11759
Q923V4	Q923V4	FBX6_RAT	Fbxo6	F-box only protein 6	1	DRDEPVDDWK	DRDEPVDDWK	3	DRDEPVDDWK3	111814	91329.5	99426.2
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	DRDFTAEDYEK	DRDFTAEDYEK	2	DRDFTAEDYEK2	2418.52		
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	DRDGQHSWVAR	DRDGQHSWVAR	3	DRDGQHSWVAR3	29809.7	34713.2	32478.6
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	DRDHFQLGTLSHTLNVK	DRDHFQLGTLSHTLNVK	3	DRDHFQLGTLSHTLNVK3	14224.3	12091.3	12373
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	DRDHFQLGTLSHTLNVK	DRDHFQLGTLSHTLNVK	4	DRDHFQLGTLSHTLNVK4	46504.3	52828.1	46908.4
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	DRDITLQQDAYWR	DRDITLQQDAYWR	3	DRDITLQQDAYWR3	5881.39	5164.72	8124.35
P02454	P02454	CO1A1_RAT	Col1a1	Collagen alpha-1(I) chain	1	DRDLEVDTTLK	DRDLEVDTTLK	3	DRDLEVDTTLK3	8403.77	2172.86	7323.51
Q5M8C6	Q5M8C6	FGL1_RAT	Fgl1	Fibrinogen-like protein 1	1	DRDNDNYNGNCAEEEQSGWWFNR	DRDNDNYNGNC(UniMod:4)AEEEQSGWWFNR	3	DRDNDNYNGNC(UniMod:4)AEEEQSGWWFNR3	14439.1		7991.3
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	DRDPEAQFEMPYVVR	DRDPEAQFEMPYVVR	3	DRDPEAQFEMPYVVR3	17626.7	8968.99	9647.87
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	DRDPNNLLISCAVSYR	DRDPNNLLISC(UniMod:4)AVSYR	3	DRDPNNLLISC(UniMod:4)AVSYR3	57288.6	65148.4	62637.5
D3ZGB8	D3ZGB8	D3ZGB8_RAT	Cilp	Cartilage intermediate layer protein	1	DRDQPNVSSACLEFK	DRDQPNVSSAC(UniMod:4)LEFK	3	DRDQPNVSSAC(UniMod:4)LEFK3	17926.9	17472.1	12878
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	DRDSYSGNCALYHR	DRDSYSGNC(UniMod:4)ALYHR	3	DRDSYSGNC(UniMod:4)ALYHR3	5713.27	5551.86	8686.8
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	DRDSYSGNCALYHR	DRDSYSGNC(UniMod:4)ALYHR	4	DRDSYSGNC(UniMod:4)ALYHR4	17290.5	13297.8	10558.6
P0C5H9	P0C5H9	MANF_RAT	Manf	Mesencephalic astrocyte-derived neurotrophic factor	1	DRDVTFSPATIEEELIK	DRDVTFSPATIEEELIK	3	DRDVTFSPATIEEELIK3	20407.1	24980.8	29144.4
D3ZMA2	D3ZMA2	D3ZMA2_RAT	Mtmr14	Myotubularin related protein 14	1	DRDYMAEGLIFNWK	DRDYMAEGLIFNWK	3	DRDYMAEGLIFNWK3	2192.04	3097.82	609.5
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	DREAAEGLGSHER	DREAAEGLGSHER	2	DREAAEGLGSHER2	34684.9	45366.9	33284.2
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	DREAAEGLGSHER	DREAAEGLGSHER	3	DREAAEGLGSHER3	1.30379e+06	1.42288e+06	1.45133e+06
P31652	P31652	SC6A4_RAT	Slc6a4	Sodium-dependent serotonin transporter	1	DREDCQENGVLQK	DREDC(UniMod:4)QENGVLQK	2	DREDC(UniMod:4)QENGVLQK2	2325.61	729.257	1201.67
P31652	P31652	SC6A4_RAT	Slc6a4	Sodium-dependent serotonin transporter	1	DREDCQENGVLQK	DREDC(UniMod:4)QENGVLQK	3	DREDC(UniMod:4)QENGVLQK3	22061.6	28227.2	38360.4
P70567	P70567	TMOD1_RAT	Tmod1	Tropomodulin-1	1	DREDLVPYTGEK	DREDLVPYTGEK	3	DREDLVPYTGEK3	8876.15	3568.37	2064.03
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	DREDYVPYTGEK	DREDYVPYTGEK	2	DREDYVPYTGEK2	30018	29120.6	32383.8
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	DREDYVPYTGEK	DREDYVPYTGEK	3	DREDYVPYTGEK3	592139	601446	642417
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	DREEALHQFR	DREEALHQFR	3	DREEALHQFR3	78983	47503.5	35783.1
D4A929	D4A929	WDR81_RAT	Wdr81	WD repeat-containing protein 81	1	DREEEEEPLPEQTEGK	DREEEEEPLPEQTEGK	3	DREEEEEPLPEQTEGK3	1229.26		
Q02563	Q02563	SV2A_RAT	Sv2a	Synaptic vesicle glycoprotein 2A	1	DREELAQQYETILR	DREELAQQYETILR	3	DREELAQQYETILR3	16752.8	11014	7548.95
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	DREFHELQGDFSVPDVPK	DREFHELQGDFSVPDVPK	3	DREFHELQGDFSVPDVPK3	5845.1		
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	DREFHELQGDFSVPDVPK	DREFHELQGDFSVPDVPK	4	DREFHELQGDFSVPDVPK4	10633.3	7727.38	
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	DREGEVTASHGLK	DREGEVTASHGLK	3	DREGEVTASHGLK3	4391.56	1862.39	5730.81
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	DRESLMLK	DRESLMLK	2	DRESLMLK2	75162.3	77650	70582
Q4V7C7	Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	1	DREVGIPPEQSLETAK	DREVGIPPEQSLETAK	3	DREVGIPPEQSLETAK3	239525	235694	259005
O88370	O88370	PI42C_RAT	Pip4k2c	Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma	1	DRFAIDDHDYLVSLTR	DRFAIDDHDYLVSLTR	4	DRFAIDDHDYLVSLTR4	6321.81	4430.35	7059.11
F7F115	F7F115	F7F115_RAT	Upf3a	UPF3A, regulator of nonsense mediated mRNA decay	1	DRFDGYIFIGNK	DRFDGYIFIGNK	3	DRFDGYIFIGNK3	2489.57		1606.48
A0A0U1RRP3	A0A0U1RRP3	A0A0U1RRP3_RAT	Upf3b	UPF3B, regulator of nonsense mediated mRNA decay	1	DRFDGYVFLDNK	DRFDGYVFLDNK	3	DRFDGYVFLDNK3	3894.52	4704.83	8359.05
Q5BK81	Q5BK81	PTGR2_RAT	Ptgr2	Prostaglandin reductase 2	1	DRFEPGILQLSQWFK	DRFEPGILQLSQWFK	3	DRFEPGILQLSQWFK3		2949.01	
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	DRFLGGLVK	DRFLGGLVK	2	DRFLGGLVK2	12778.5	12885.1	16171.9
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	DRFSAEDEALSNIAR	DRFSAEDEALSNIAR	3	DRFSAEDEALSNIAR3	171071	192392	199543
A0A8I6A7R6	A0A8I5ZLW9;M0RCL7;A0A8I6A7R6;A0A8I6A6Q3	A0A8I6A7R6_RAT	ENSRNOG00000065040	Ig-like domain-containing protein	0	DRFTISR	DRFTISR	2	DRFTISR2	150449	149368	147721
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	DRGEWESLTPEAR	DRGEWESLTPEAR	3	DRGEWESLTPEAR3	33537	42890.9	33622.4
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	DRGHDSEMIGDLQAR	DRGHDSEMIGDLQAR	3	DRGHDSEMIGDLQAR3	22287.8	16214.4	13629.4
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	DRGHDSEMIGDLQAR	DRGHDSEMIGDLQAR	4	DRGHDSEMIGDLQAR4	13013.9	12264.6	13223.7
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	DRGNVASLIMTVLQSK	DRGNVASLIMTVLQSK	3	DRGNVASLIMTVLQSK3	5514.43	3635.64	3591.56
Q5XIT9	Q5XIT9	MCCB_RAT	Mccc2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	1	DRIDNLIDPGSPFLEFSQFAGYK	DRIDNLIDPGSPFLEFSQFAGYK	3	DRIDNLIDPGSPFLEFSQFAGYK3	13992.2	14464.3	22050.1
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	DRIEAILQQMEEVSIER	DRIEAILQQMEEVSIER	3	DRIEAILQQMEEVSIER3	16399	7056.96	13163.7
A0A0G2K516	A0A0G2K516	A0A0G2K516_RAT	Stx11	Syntaxin 11	1	DRLAELQELSR	DRLAELQELSR	3	DRLAELQELSR3	17663.2	22791.2	23408.4
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	DRLEEVR	DRLEEVR	1	DRLEEVR1	218694	243848	197731
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	DRLEEVR	DRLEEVR	2	DRLEEVR2	52693.9	3.05047e+07	2.63673e+07
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	DRLEEVREQMEEVR	DRLEEVREQMEEVR	2	DRLEEVREQMEEVR2	229379	205525	176741
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	DRLEEVREQMEEVR	DRLEEVREQMEEVR	3	DRLEEVREQMEEVR3	8752.09	16544.6	4942.89
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	DRLEEVREQMEEVR	DRLEEVREQMEEVR	4	DRLEEVREQMEEVR4	27222.5	20636.8	22100.7
F1LU71	F1LU71	AUHM_RAT	Auh	Methylglutaconyl-CoA hydratase, mitochondrial	1	DRLEGLLAFK	DRLEGLLAFK	2	DRLEGLLAFK2	30990.5	33070	32006.2
F1LU71	F1LU71	AUHM_RAT	Auh	Methylglutaconyl-CoA hydratase, mitochondrial	1	DRLEGLLAFK	DRLEGLLAFK	3	DRLEGLLAFK3	137389	141921	149587
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	DRLELWCTDVK	DRLELWC(UniMod:4)TDVK	2	DRLELWC(UniMod:4)TDVK2	6575.36	6542.43	
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	DRLELWCTDVK	DRLELWC(UniMod:4)TDVK	3	DRLELWC(UniMod:4)TDVK3	66370.4	74444.2	79821.8
Q3B7D1	Q3B7D1	UBE2Z_RAT	Ube2z	Ubiquitin-conjugating enzyme E2 Z	1	DRLHLQGQTMQDPFGEK	DRLHLQGQTMQDPFGEK	4	DRLHLQGQTMQDPFGEK4		6307.25	4881.18
Q1EHB3	Q1EHB3	ATS7_RAT	Adamts7	A disintegrin and metalloproteinase with thrombospondin motifs 7	1	DRLPFNFCETLR	DRLPFNFC(UniMod:4)ETLR	3	DRLPFNFC(UniMod:4)ETLR3	9870.62	4381.29	6328.48
Q9WVC0	Q9WVC0	SEPT7_RAT	Septin7	Septin-7	1	DRLPLAVVGSNTIIEVNGK	DRLPLAVVGSNTIIEVNGK	3	DRLPLAVVGSNTIIEVNGK3	13037.1	12024.8	9020.33
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	DRLPVESSMGQGVVSR	DRLPVESSMGQGVVSR	3	DRLPVESSMGQGVVSR3	8091	10180	7249.79
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	DRLSVECR	DRLSVEC(UniMod:4)R	2	DRLSVEC(UniMod:4)R2	14374	19027.7	6737.7
O70257	O70257	STX7_RAT	Stx7	Syntaxin-7	1	DRLVAEFTTALTNFQK	DRLVAEFTTALTNFQK	3	DRLVAEFTTALTNFQK3	7199.08	12567.9	11764.8
F7FPK8	F7FPK8	F7FPK8_RAT	Lman2	Lectin, mannose-binding 2	1	DRLVPGPVFGSK	DRLVPGPVFGSK	2	DRLVPGPVFGSK2	4030.13	5009.85	1618.56
F7FPK8	F7FPK8	F7FPK8_RAT	Lman2	Lectin, mannose-binding 2	1	DRLVPGPVFGSK	DRLVPGPVFGSK	3	DRLVPGPVFGSK3	56052.4	57860.9	70774.9
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	DRLWSSPAFSPTCPFR	DRLWSSPAFSPTC(UniMod:4)PFR	3	DRLWSSPAFSPTC(UniMod:4)PFR3	5546.53	3820.89	
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	DRMEGALASLAQELQDSK	DRMEGALASLAQELQDSK	3	DRMEGALASLAQELQDSK3	12021.8	25362.3	27776.7
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	DRNDFWEGIK	DRNDFWEGIK	2	DRNDFWEGIK2	15793.5	15484.7	12897.2
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	DRNDFWEGIK	DRNDFWEGIK	3	DRNDFWEGIK3	273566	359008	304974
F7EYK0	F7EYK0	F7EYK0_RAT	Fkbp5	peptidylprolyl isomerase	1	DRNEPFVFSLGK	DRNEPFVFSLGK	3	DRNEPFVFSLGK3	19157.4	20250.3	12366.4
Q62598	Q62598	DSPP_RAT	Dspp	Dentin sialophosphoprotein	1	DRNGSESIAVGGK	DRNGSESIAVGGK	3	DRNGSESIAVGGK3	4484.37	10513.1	9900.54
O35977	O35977	O35977_RAT	Gfra2	GDNF family receptor alpha-2	1	DRNTMLANK	DRNTMLANK	2	DRNTMLANK2	5282.47		4612.89
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	DRNVDVVLEDSCTVGEIK	DRNVDVVLEDSC(UniMod:4)TVGEIK	3	DRNVDVVLEDSC(UniMod:4)TVGEIK3	8729.43	16828	9582.5
A0A0U1RRP3	A0A0U1RRP3	A0A0U1RRP3_RAT	Upf3b	UPF3B, regulator of nonsense mediated mRNA decay	1	DRPAMQLYQPGAR	DRPAMQLYQPGAR	3	DRPAMQLYQPGAR3	6154.63	9594.58	12906
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	DRPASSTELLAVQEGIK	DRPASSTELLAVQEGIK	3	DRPASSTELLAVQEGIK3	12884.7	16050.9	10444.3
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	DRPESVYFFK	DRPESVYFFK	2	DRPESVYFFK2	37282.3	51221.9	26760.2
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	DRPESVYFFK	DRPESVYFFK	3	DRPESVYFFK3	312933	366341	340416
P19804	P19804	NDKB_RAT	Nme2	Nucleoside diphosphate kinase B	1	DRPFFPGLVK	DRPFFPGLVK	2	DRPFFPGLVK2	34460.9	26324.6	29080.8
P19804	P19804	NDKB_RAT	Nme2	Nucleoside diphosphate kinase B	1	DRPFFPGLVK	DRPFFPGLVK	3	DRPFFPGLVK3	358184	297892	310239
Q05982	Q05982	NDKA_RAT	Nme1	Nucleoside diphosphate kinase A	1	DRPFFSGLVK	DRPFFSGLVK	3	DRPFFSGLVK3	73821.7	58360.3	49264.3
Q505J8	Q505J8	SYFA_RAT	Farsa	Phenylalanine--tRNA ligase alpha subunit	1	DRPFKPYNFSAR	DRPFKPYNFSAR	3	DRPFKPYNFSAR3	7469.93	8916.39	6654.63
A0A0G2K0A0	A0A0G2K0A0	A0A0G2K0A0_RAT	Cyth4	Cytohesin 4	1	DRPHFEHFVSMNR	DRPHFEHFVSMNR	4	DRPHFEHFVSMNR4	12006.9	14967.9	6875.33
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	DRPIEESLLLFEAMR	DRPIEESLLLFEAMR	3	DRPIEESLLLFEAMR3	50078	48047.8	33083.7
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	DRPLADWLQK	DRPLADWLQK	3	DRPLADWLQK3	4884.97	10052.2	6274.02
F1M784	F1M784	F1M784_RAT	Pik3ap1	Phosphoinositide-3-kinase adaptor protein 1	1	DRPPSSIYDPFAGMK	DRPPSSIYDPFAGMK	3	DRPPSSIYDPFAGMK3	26177.2	10182.1	20055
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	DRPQEADGIDSVIVVDNVPQVGPDR	DRPQEADGIDSVIVVDNVPQVGPDR	3	DRPQEADGIDSVIVVDNVPQVGPDR3	166957	119290	117714
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	DRPQEADGIDSVIVVDNVPQVGPDRLEK	DRPQEADGIDSVIVVDNVPQVGPDRLEK	4	DRPQEADGIDSVIVVDNVPQVGPDRLEK4	78939.7	107115	91387.4
Q62761	Q62761	KC1G1_RAT	Csnk1g1	Casein kinase I isoform gamma-1	1	DRPSQQQPLR	DRPSQQQPLR	3	DRPSQQQPLR3	20711.6	17204.5	
Q6P6Q9	Q6P6Q9	MICU1_RAT	Micu1	Calcium uptake protein 1, mitochondrial	1	DRPTTGNTLK	DRPTTGNTLK	2	DRPTTGNTLK2	24729.9	24577	18854.8
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	DRPVSQPSLVGSK	DRPVSQPSLVGSK	3	DRPVSQPSLVGSK3	7654.47	6470.45	10336.5
Q9Z1N3	Q9Z1N3	MYO9A_RAT	Myo9a	Unconventional myosin-IXa	1	DRPVTLFFER	DRPVTLFFER	3	DRPVTLFFER3	3126.22	7543.39	
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	DRPYDYK	DRPYDYK	2	DRPYDYK2	57859.9	65776.4	46947
A0A0G2K059	A0A0G2K059	A0A0G2K059_RAT	Mcu	Calcium uniporter protein	1	DRQYLLFFHK	DRQYLLFFHK	3	DRQYLLFFHK3	108748	118518	119878
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	DRQYLPAIK	DRQYLPAIK	2	DRQYLPAIK2	14727.3	18521.9	17577.9
D4A914	D4A914	D4A914_RAT	Xrn2	5'-3' exoribonuclease	1	DRRPVHLDQAAFR	DRRPVHLDQAAFR	4	DRRPVHLDQAAFR4	22932.6	13571.1	
A0A8I6ARV9	A0A8I6ARV9	A0A8I6ARV9_RAT	Ctsa	Carboxypeptidase	1	DRSEDTLVVQDFGNIFTR	DRSEDTLVVQDFGNIFTR	3	DRSEDTLVVQDFGNIFTR3	15697	13208.9	9956.2
O35763	O35763	MOES_RAT	Msn	Moesin	1	DRSEEER	DRSEEER	2	DRSEEER2			1887.23
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	DRSMTNINDGLLR	DRSMTNINDGLLR	2	DRSMTNINDGLLR2	19262.8	28452.8	33058.1
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	DRSMTNINDGLLR	DRSMTNINDGLLR	3	DRSMTNINDGLLR3	151702	217879	211805
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	DRSMTNINDGLLRGIEMLNK	DRSMTNINDGLLRGIEMLNK	4	DRSMTNINDGLLRGIEMLNK4	5807.41	1786.07	7025.44
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	DRSQGGETLDECGLK	DRSQGGETLDEC(UniMod:4)GLK	3	DRSQGGETLDEC(UniMod:4)GLK3	10924.5	6538.06	11192.9
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	DRSQLYDDLMDEFMK	DRSQLYDDLMDEFMK	3	DRSQLYDDLMDEFMK3	4775.85	3987.07	10227.5
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	DRTDIQCLIPCAIDQDPYFR	DRTDIQC(UniMod:4)LIPC(UniMod:4)AIDQDPYFR	3	DRTDIQC(UniMod:4)LIPC(UniMod:4)AIDQDPYFR3	16612.5	18490.9	15994.5
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	DRTDMFAIHPTSGVVVLTGR	DRTDMFAIHPTSGVVVLTGR	3	DRTDMFAIHPTSGVVVLTGR3	2586.24	11630.1	4016.27
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	DRTDMFAIHPTSGVVVLTGR	DRTDMFAIHPTSGVVVLTGR	4	DRTDMFAIHPTSGVVVLTGR4	20088	30288.3	25880.4
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	DRTEEVMELTDEQR	DRTEEVMELTDEQR	3	DRTEEVMELTDEQR3	9181.04	7909.74	7955.58
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	DRTEEVMELTDEQRNELMK	DRTEEVMELTDEQRNELMK	3	DRTEEVMELTDEQRNELMK3	4467.96	15437	2247.07
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	DRTEEVMELTDEQRNELMK	DRTEEVMELTDEQRNELMK	4	DRTEEVMELTDEQRNELMK4	11902.7	6285.89	12135.9
B2GV15	B2GV15	B2GV15_RAT	Dbt	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	DRTEPVTGFQK	DRTEPVTGFQK	3	DRTEPVTGFQK3	23886.8	29683	24801.9
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	DRTHGSEIINDLQGR	DRTHGSEIINDLQGR	3	DRTHGSEIINDLQGR3	43916.7	51670.1	41254.6
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	DRTHGSEIINDLQGR	DRTHGSEIINDLQGR	4	DRTHGSEIINDLQGR4	13810.6	22843.6	32286.8
P97535	P97535	PLA1A_RAT	Pla1a	Phospholipase A1 member A	1	DRTPIVGTFCTAPLPVNDSK	DRTPIVGTFC(UniMod:4)TAPLPVNDSK	3	DRTPIVGTFC(UniMod:4)TAPLPVNDSK3	52041.4	48139.8	60555.9
P97535	P97535	PLA1A_RAT	Pla1a	Phospholipase A1 member A	1	DRTPIVGTFCTAPLPVNDSKK	DRTPIVGTFC(UniMod:4)TAPLPVNDSKK	4	DRTPIVGTFC(UniMod:4)TAPLPVNDSKK4	4282.89	8755.24	14055.4
Q08851	Q08851	STX5_RAT	Stx5	Syntaxin-5	1	DRTQEFLSACK	DRTQEFLSAC(UniMod:4)K	3	DRTQEFLSAC(UniMod:4)K3	9173.12	7032.62	4313.68
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	DRTQIAICPNNHEVHIYEK	DRTQIAIC(UniMod:4)PNNHEVHIYEK	3	DRTQIAIC(UniMod:4)PNNHEVHIYEK3	2796.48	2172.85	
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	DRTQIAICPNNHEVHIYEK	DRTQIAIC(UniMod:4)PNNHEVHIYEK	4	DRTQIAIC(UniMod:4)PNNHEVHIYEK4	24050.3	34932.4	23031
Q99PD4	Q99PD4	ARC1A_RAT	Arpc1a	Actin-related protein 2/3 complex subunit 1A	1	DRTQIALSPNNHEVHIYK	DRTQIALSPNNHEVHIYK	4	DRTQIALSPNNHEVHIYK4	12908.5	20143.7	22684.9
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	DRTTSFNANLALK	DRTTSFNANLALK	3	DRTTSFNANLALK3	59891.2	43365.5	47327.9
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	DRVAGESADPEPEPEADYYAK	DRVAGESADPEPEPEADYYAK	3	DRVAGESADPEPEPEADYYAK3	85006.5	113460	110054
P10252	P10252	CD48_RAT	Cd48	CD48 antigen	1	DRVDLDK	DRVDLDK	2	DRVDLDK2	130313	118549	129188
P10252	P10252	CD48_RAT	Cd48	CD48 antigen	1	DRVDLDKTNGALR	DRVDLDKTNGALR	3	DRVDLDKTNGALR3	4703		4314.33
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	DRVEDLMLER	DRVEDLMLER	2	DRVEDLMLER2	12710.9	16992.6	7624.55
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	DRVEDLMLER	DRVEDLMLER	3	DRVEDLMLER3	104560	93005.7	114317
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	DRVEEMAANSTAVEDITK	DRVEEMAANSTAVEDITK	3	DRVEEMAANSTAVEDITK3		7023.28	7859.09
B2RYM5	B2RYM5	BRCC3_RAT	Brcc3	Lys-63-specific deubiquitinase BRCC36	1	DRVEISPEQLSAASTEAER	DRVEISPEQLSAASTEAER	3	DRVEISPEQLSAASTEAER3	42086.4	51657.1	47646.6
O35783	O35783	CALU_RAT	Calu	Calumenin	1	DRVHHEPQLSDK	DRVHHEPQLSDK	3	DRVHHEPQLSDK3	46515.5		37201
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	DRVNDDLISEFPDK	DRVNDDLISEFPDK	3	DRVNDDLISEFPDK3	13892.6	9793.5	6318.12
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DRVNDVCTNGQDLIK	DRVNDVC(UniMod:4)TNGQDLIK	2	DRVNDVC(UniMod:4)TNGQDLIK2	852.083		
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DRVNDVCTNGQDLIK	DRVNDVC(UniMod:4)TNGQDLIK	3	DRVNDVC(UniMod:4)TNGQDLIK3	76058	84595.1	93583.4
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DRVNDVCTNGQDLIKK	DRVNDVC(UniMod:4)TNGQDLIKK	3	DRVNDVC(UniMod:4)TNGQDLIKK3	2149.56	3521.46	3843.04
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DRVNDVCTNGQDLIKK	DRVNDVC(UniMod:4)TNGQDLIKK	4	DRVNDVC(UniMod:4)TNGQDLIKK4	13412.6	19621	16327
Q6TMA8	Q6TMA8	ANGL4_RAT	Angptl4	Angiopoietin-related protein 4	1	DRVPEGQAPETLQSLQTQLK	DRVPEGQAPETLQSLQTQLK	3	DRVPEGQAPETLQSLQTQLK3	2876.88	7794.57	9733.74
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	DRVTSAVEALLSADSASR	DRVTSAVEALLSADSASR	3	DRVTSAVEALLSADSASR3	109214	135953	122947
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	DRVVEESELGR	DRVVEESELGR	2	DRVVEESELGR2	40167.8	29035.7	25823
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	DRVVEESELGR	DRVVEESELGR	3	DRVVEESELGR3	184709	157508	151973
Q68FT7	Q68FT7	Q68FT7_RAT	Farsb	Phenylalanine--tRNA ligase beta subunit	1	DRYDSFIELQEK	DRYDSFIELQEK	3	DRYDSFIELQEK3	8266.73	7838.34	10128
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	DRYGVYSYIYPNK	DRYGVYSYIYPNK	2	DRYGVYSYIYPNK2	27311.8	20484.6	18975.4
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	DRYGVYSYIYPNK	DRYGVYSYIYPNK	3	DRYGVYSYIYPNK3	59546.9	54367.9	59107.2
P29315	P29315	RINI_RAT	Rnh1	Ribonuclease inhibitor	1	DSACQLESLK	DSAC(UniMod:4)QLESLK	2	DSAC(UniMod:4)QLESLK2	52237.8	48950.2	44681.6
D3ZQK4	D3ZQK4	D3ZQK4_RAT	Txndc16	Thioredoxin domain containing 16	1	DSADVNIPQHANVAFR	DSADVNIPQHANVAFR	3	DSADVNIPQHANVAFR3	2288.87	4032.06	
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	DSAFGLLR	DSAFGLLR	2	DSAFGLLR2	6.06781e+06	6.08481e+06	5.55009e+06
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	DSAGEPLYK	DSAGEPLYK	2	DSAGEPLYK2	7851.99	4064.97	
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	DSAGEPQR	DSAGEPQR	1	DSAGEPQR1			2378.61
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	DSAGEPQR	DSAGEPQR	2	DSAGEPQR2			110473
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	DSAGEPQRVVVTVADQVVVLAR	DSAGEPQRVVVTVADQVVVLAR	3	DSAGEPQRVVVTVADQVVVLAR3	4114.08	660.245	2380.56
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	DSAIQQQVANLQMK	DSAIQQQVANLQMK	2	DSAIQQQVANLQMK2	102722	95782.4	93296
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	DSAIQQQVANLQMK	DSAIQQQVANLQMK	3	DSAIQQQVANLQMK3	71229.8	51679.9	75001.3
D3ZSM9	D3ZSM9	D3ZSM9_RAT	Brat1	BRCA1-associated ATM activator 1	1	DSALEFLTHLIR	DSALEFLTHLIR	3	DSALEFLTHLIR3	4180.73		1581.16
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	DSALSWEYCR	DSALSWEYC(UniMod:4)R	2	DSALSWEYC(UniMod:4)R2	367183	335564	321325
P31977	P31977	EZRI_RAT	Ezr	Ezrin	1	DSAMLEYLK	DSAMLEYLK	2	DSAMLEYLK2	10024.8	10406.4	13909.8
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	DSANVGYLR	DSANVGYLR	2	DSANVGYLR2	13273.3	13850.8	7238.51
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	DSAPQVCPIPPEQSK	DSAPQVC(UniMod:4)PIPPEQSK	2	DSAPQVC(UniMod:4)PIPPEQSK2	33517.9	50144	42055.6
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	DSAQDVQAK	DSAQDVQAK	1	DSAQDVQAK1			12449.9
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	DSAQDVQAK	DSAQDVQAK	2	DSAQDVQAK2			148937
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	DSAQESVITR	DSAQESVITR	2	DSAQESVITR2	22810	23013.4	28371
Q9JK72	Q9JK72	CCS_RAT	Ccs	Copper chaperone for superoxide dismutase	1	DSAQPPAHL	DSAQPPAHL	2	DSAQPPAHL2	67808.3	67058.7	65695.8
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	DSASEEVFTR	DSASEEVFTR	2	DSASEEVFTR2	30340.2	23631.7	19380.7
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	DSATAQAWFSAIHSNVGDLLVR	DSATAQAWFSAIHSNVGDLLVR	3	DSATAQAWFSAIHSNVGDLLVR3	43117	42105.2	40142.9
D4A482	D4A482;B1WBW6	D4A482_RAT	Mfsd2b	Major facilitator superfamily domain containing 2B	0	DSATAYR	DSATAYR	2	DSATAYR2	49457.6	63032.3	77945.3
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	DSATDEQLFR	DSATDEQLFR	2	DSATDEQLFR2	8747.61	8706.68	7818.04
Q62656	Q62656	PTPRZ_RAT	Ptprz1	Receptor-type tyrosine-protein phosphatase zeta	1	DSATNQIR	DSATNQIR	2	DSATNQIR2	184993	186457	
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	DSAVAISGADSR	DSAVAISGADSR	2	DSAVAISGADSR2	50158.3	63774.1	61595.8
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	DSAVVCR	DSAVVC(UniMod:4)R	2	DSAVVC(UniMod:4)R2	46188.1	60370.8	
B2GUZ5	B2GUZ5	CAZA1_RAT	Capza1	F-actin-capping protein subunit alpha-1	1	DSCDSALR	DSC(UniMod:4)DSALR	2	DSC(UniMod:4)DSALR2	520179	473116	542476
Q63621	Q63621	IL1AP_RAT	Il1rap	Interleukin-1 receptor accessory protein	1	DSCFNSPMR	DSC(UniMod:4)FNSPMR	2	DSC(UniMod:4)FNSPMR2	66172	63151.7	70544.2
A0A8I5ZSN8;A0A8I6A2P1	A0A8I5ZSN8;A0A8I6A2P1	A0A8I5ZSN8_RAT;A0A8I6A2P1_RAT	AABR07026797.1;Srsf3	RRM domain-containing protein	0	DSCPLDCK	DSC(UniMod:4)PLDC(UniMod:4)K	2	DSC(UniMod:4)PLDC(UniMod:4)K2	23413.4	37736.6	21004.6
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	DSCRGDSGGALVFLDNETQR	DSC(UniMod:4)RGDSGGALVFLDNETQR	3	DSC(UniMod:4)RGDSGGALVFLDNETQR3	5504.78	9367.3	6733
P01026	P01026	CO3_RAT	C3	Complement C3	1	DSCVGTLVVK	DSC(UniMod:4)VGTLVVK	2	DSC(UniMod:4)VGTLVVK2	2.30949e+06	2.36303e+06	2.25813e+06
Q5M9F5	Q5M9F5	DPH6_RAT	Dph6	Diphthine--ammonia ligase	1	DSCYNMMR	DSC(UniMod:4)YNMMR	2	DSC(UniMod:4)YNMMR2	2244.39	1711.04	3231.06
O88321	O88321	O88321_RAT	Psmd4	26S proteasome non-ATPase regulatory subunit 4	1	DSDDALLK	DSDDALLK	2	DSDDALLK2		5270.53	
Q04970	Q04970;A0A8I6AHV4;P20171	RASN_RAT	Nras	GTPase NRas	0	DSDDVPMVLVGNK	DSDDVPMVLVGNK	2	DSDDVPMVLVGNK2	83088.3	81816.7	103211
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	DSDDYAQLCNIPVTGR	DSDDYAQLC(UniMod:4)NIPVTGR	2	DSDDYAQLC(UniMod:4)NIPVTGR2	152575	174644	170201
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	DSDDYAQLCNIPVTGR	DSDDYAQLC(UniMod:4)NIPVTGR	3	DSDDYAQLC(UniMod:4)NIPVTGR3	119107	123792	128262
Q5RJK5	D3ZRS6;Q5RJK5	Q5RJK5_RAT	Cbx3	Chromobox 3	0	DSDEADLVLAK	DSDEADLVLAK	2	DSDEADLVLAK2	4600.63	3224.62	3180.49
Q9EQY6	Q9EQY6	PIGM_RAT	Pigm	GPI mannosyltransferase 1	1	DSDEGLR	DSDEGLR	2	DSDEGLR2		39083.2	
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	DSDGDGRGDACK	DSDGDGRGDAC(UniMod:4)K	2	DSDGDGRGDAC(UniMod:4)K2		13898	39018.7
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	DSDGQVFGALASEPFK	DSDGQVFGALASEPFK	2	DSDGQVFGALASEPFK2	36254.9	41001	44421.6
A0A8I6A5X2	A0A8I6A5X2	A0A8I6A5X2_RAT	Usp32	ubiquitinyl hydrolase 1	1	DSDGRPDWEVAAEAWDNHLR	DSDGRPDWEVAAEAWDNHLR	4	DSDGRPDWEVAAEAWDNHLR4	3746.47		1891.72
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	DSDIEQLR	DSDIEQLR	2	DSDIEQLR2	120242	149030	156246
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	DSDIGSRPESMGCGR	DSDIGSRPESMGC(UniMod:4)GR	3	DSDIGSRPESMGC(UniMod:4)GR3	44685.9	51430	57539.9
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	DSDKDLK	DSDKDLK	1	DSDKDLK1			5525.08
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	DSDKDLK	DSDKDLK	2	DSDKDLK2			27632.2
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	DSDLSSQVHDLK	DSDLSSQVHDLK	2	DSDLSSQVHDLK2	3276.24	2876.7	1744.19
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	DSDLSSQVHDLK	DSDLSSQVHDLK	3	DSDLSSQVHDLK3	20249.4	14196.8	19354.4
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	DSDQLEVIQENR	DSDQLEVIQENR	2	DSDQLEVIQENR2	13989.5	12774.7	10930.1
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	DSDRVAQSDGEESPAEEGQLLGER	DSDRVAQSDGEESPAEEGQLLGER	3	DSDRVAQSDGEESPAEEGQLLGER3	3758.68		4040.23
P19234	P19234	NDUV2_RAT	Ndufv2	NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial	1	DSDSILETLQR	DSDSILETLQR	2	DSDSILETLQR2	76908.4	90702.2	89013
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	DSDSMETEEK	DSDSMETEEK	2	DSDSMETEEK2	68713.5	58679.4	74787.2
D3ZDW3	D3ZDW3	D3ZDW3_RAT	Tsc22d2	TSC22 domain family, member 2	1	DSDSSVLSR	DSDSSVLSR	2	DSDSSVLSR2	26068.2	34438.3	31265.6
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	DSDVIGFR	DSDVIGFR	2	DSDVIGFR2	32915.1	28005.2	31860.5
Q9JLU4	Q9JLU4	SHAN3_RAT	Shank3	SH3 and multiple ankyrin repeat domains protein 3	1	DSDVVPFR	DSDVVPFR	2	DSDVVPFR2	12433.1	9533.28	11535.5
P50745	P50745	SH2B3_RAT	Sh2b3	SH2B adapter protein 3	1	DSDYEMDSSSR	DSDYEMDSSSR	2	DSDYEMDSSSR2			2340.95
P62944	P62944	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	1	DSDYYNMLLK	DSDYYNMLLK	2	DSDYYNMLLK2	36524	41420.4	37335.2
Q9WVC0	Q9WVC0;A0A0G2JV25;A0A8I6ARI4	SEPT7_RAT	Septin7	Septin-7	0	DSEAELQR	DSEAELQR	2	DSEAELQR2	124918	106677	129672
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	DSEAETWMK	DSEAETWMK	2	DSEAETWMK2	8634.25	2851.82	
B1H219	B1H219	B1H219_RAT	Dkk3	Dickkopf WNT signaling pathway inhibitor 3	1	DSECCGDQLCAWGHCTQK	DSEC(UniMod:4)C(UniMod:4)GDQLC(UniMod:4)AWGHC(UniMod:4)TQK	3	DSEC(UniMod:4)C(UniMod:4)GDQLC(UniMod:4)AWGHC(UniMod:4)TQK3	731396	743699	682765
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	DSEDEEAWIQETEPSAASTHLGK	DSEDEEAWIQETEPSAASTHLGK	3	DSEDEEAWIQETEPSAASTHLGK3	7552.52	6886.58	6591.48
A0A8I5ZUS1	A0A8I5ZUS1	A0A8I5ZUS1_RAT	Map3k4	Mitogen activated protein kinase kinase kinase 4	1	DSEDGWSTWEAR	DSEDGWSTWEAR	2	DSEDGWSTWEAR2		4204.69	
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	DSEDTQVVQDCEGTEAR	DSEDTQVVQDC(UniMod:4)EGTEAR	2	DSEDTQVVQDC(UniMod:4)EGTEAR2	3007.6		4633.04
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	DSEDTQVVQDCEGTEARPYCK	DSEDTQVVQDC(UniMod:4)EGTEARPYC(UniMod:4)K	3	DSEDTQVVQDC(UniMod:4)EGTEARPYC(UniMod:4)K3	136722	148881	135685
P08644	P08644	RASK_RAT	Kras	GTPase KRas	1	DSEDVPMVLVGNK	DSEDVPMVLVGNK	2	DSEDVPMVLVGNK2	166355	141049	168802
B2GV15	B2GV15	B2GV15_RAT	Dbt	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	DSEEDVVETPAVAHDEHTHQEIK	DSEEDVVETPAVAHDEHTHQEIK	4	DSEEDVVETPAVAHDEHTHQEIK4	12794.4	12778.5	5900.77
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	DSEGCWITYTLQQK	DSEGC(UniMod:4)WITYTLQQK	2	DSEGC(UniMod:4)WITYTLQQK2	58686.5	50121.7	68092.5
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	DSEGCWITYTLQQK	DSEGC(UniMod:4)WITYTLQQK	3	DSEGC(UniMod:4)WITYTLQQK3	19793.1	13301	29304.1
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	DSEGDTPSLINWPSR	DSEGDTPSLINWPSR	2	DSEGDTPSLINWPSR2	3886.18	8795.82	6596.58
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	DSEGRNEDASFPSTPEPVKDSSR	DSEGRNEDASFPSTPEPVKDSSR	4	DSEGRNEDASFPSTPEPVKDSSR4	18084.8	10075	11190.7
Q920H8	Q920H8	HEPH_RAT	Heph	Hephaestin	1	DSEGSLYPDGSSGYLK	DSEGSLYPDGSSGYLK	2	DSEGSLYPDGSSGYLK2		3688.05	
G3V728	G3V728	G3V728_RAT	Nipsnap1	Nipsnap homolog 1	1	DSEGSWFR	DSEGSWFR	2	DSEGSWFR2	29934.1	28796.1	32106.2
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	DSEGTVSFLSDSGK	DSEGTVSFLSDSGK	2	DSEGTVSFLSDSGK2	617562	622810	632620
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	DSEGTVSFLSDSGKK	DSEGTVSFLSDSGKK	2	DSEGTVSFLSDSGKK2	13326.4	7775.96	11708.6
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	DSEGTVSFLSDSGKK	DSEGTVSFLSDSGKK	3	DSEGTVSFLSDSGKK3	50889.5	45640.3	49975.6
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	DSEGVDIK	DSEGVDIK	2	DSEGVDIK2	11497.2	13829.1	11936.4
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	DSEHIFR	DSEHIFR	2	DSEHIFR2	6068.04	5011.25	7472.11
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	DSEKPETPVGTVPVPVLIGNISGQGLSR	DSEKPETPVGTVPVPVLIGNISGQGLSR	3	DSEKPETPVGTVPVPVLIGNISGQGLSR3	10609.1	11478.1	11651.4
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	DSEPAEAGGIQR	DSEPAEAGGIQR	2	DSEPAEAGGIQR2	204794	208272	173650
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	DSEQTVIPAAIPK	DSEQTVIPAAIPK	2	DSEQTVIPAAIPK2	14240.3	16992	13121.5
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	DSEQVDSWMSR	DSEQVDSWMSR	2	DSEQVDSWMSR2	10716	10582.2	13329.4
A0A8I5ZWR1	A0A8I6G5H1;A0A8I5ZWR1;A0A8I6B265	A0A8I5ZWR1_RAT	ENSRNOG00000069249	Ig-like domain-containing protein	0	DSERPSGISDR	DSERPSGISDR	3	DSERPSGISDR3		40599.1	
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	DSESSKPSFMPR	DSESSKPSFMPR	3	DSESSKPSFMPR3	60636.5	47583.3	50902.8
B2RZ33	B2RZ33	B2RZ33_RAT	Nck1	Cytoplasmic protein	1	DSESSPNDFSVSLK	DSESSPNDFSVSLK	2	DSESSPNDFSVSLK2	10968.6	9304.24	8035.76
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	DSESSPSDFSVSLK	DSESSPSDFSVSLK	2	DSESSPSDFSVSLK2	124220	107499	136059
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	DSETDPELVNTGEGK	DSETDPELVNTGEGK	2	DSETDPELVNTGEGK2	84086.7	79851.8	95788.2
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	DSETEVEELR	DSETEVEELR	2	DSETEVEELR2	7557.7		
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	DSETEVEELRK	DSETEVEELRK	3	DSETEVEELRK3	5751.48	2148.27	
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	DSETGENIR	DSETGENIR	2	DSETGENIR2		59067.5	
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	DSEVQEAALR	DSEVQEAALR	2	DSEVQEAALR2	12922	9922.3	7315.14
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	DSEVQEAALRR	DSEVQEAALRR	3	DSEVQEAALRR3	9650.88	13027	11430.1
A0FKI7	A0FKI7;A0A8I5Y5I3	ACBD5_RAT	Acbd5	Acyl-CoA-binding domain-containing protein 5	0	DSFAQDSDIHTDSSR	DSFAQDSDIHTDSSR	3	DSFAQDSDIHTDSSR3	5058.97		
A0A0G2K598	A0A0G2K598	A0A0G2K598_RAT	Tacc2	Transforming, acidic coiled-coil containing protein 2	1	DSFCVGQGLSK	DSFC(UniMod:4)VGQGLSK	2	DSFC(UniMod:4)VGQGLSK2		3279.5	
P43244	P43244	MATR3_RAT	Matr3	Matrin-3	1	DSFDDRGPSLNPVLDYDHGSR	DSFDDRGPSLNPVLDYDHGSR	4	DSFDDRGPSLNPVLDYDHGSR4	8957.58		
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	DSFDIIK	DSFDIIK	1	DSFDIIK1	39880.4	28295.3	23902.9
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	DSFDIIK	DSFDIIK	2	DSFDIIK2	1.20328e+06	796482	696521
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	DSFDIIKR	DSFDIIKR	2	DSFDIIKR2	11895	9744.63	5382.85
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	DSFFNPATR	DSFFNPATR	2	DSFFNPATR2	529320	493644	523673
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	DSFGGYR	DSFGGYR	2	DSFGGYR2	12579.4	8776.23	16594
D4AA14	D4AA14	D4AA14_RAT	Aifm2	Apoptosis inducing factor, mitochondria associated 2	1	DSFHHNVAALR	DSFHHNVAALR	3	DSFHHNVAALR3	10898.6		
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	DSFHLDEQFTVPVAMMHAQSYPLR	DSFHLDEQFTVPVAMMHAQSYPLR	3	DSFHLDEQFTVPVAMMHAQSYPLR3	18756.1	12442.3	15443.4
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	DSFHLDEQFTVPVAMMHAQSYPLR	DSFHLDEQFTVPVAMMHAQSYPLR	4	DSFHLDEQFTVPVAMMHAQSYPLR4	13896.7	21206.6	14450.2
Q9WV63	Q62909;Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	0	DSFIGENSR	DSFIGENSR	2	DSFIGENSR2	818176	893626	938564
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	DSFIQTK	DSFIQTK	2	DSFIQTK2	8834.83	14251	12331.4
P31211	P31211	CBG_RAT	Serpina6	Corticosteroid-binding globulin	1	DSFLADVK	DSFLADVK	1	DSFLADVK1	3986.27	3212.76	2236.49
P31211	P31211	CBG_RAT	Serpina6	Corticosteroid-binding globulin	1	DSFLADVK	DSFLADVK	2	DSFLADVK2	456037	308531	309171
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	DSFLGSIPGK	DSFLGSIPGK	2	DSFLGSIPGK2	45252.1	49575.6	37225.2
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	DSFMVELVEGAR	DSFMVELVEGAR	2	DSFMVELVEGAR2	6800.7	6898.05	11602.5
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	DSFPFDQQFNILMR	DSFPFDQQFNILMR	2	DSFPFDQQFNILMR2	11978.4	20561.8	
D3ZLT1	D3ZLT1	D3ZLT1_RAT	Ndufb7	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7	1	DSFPNFVACK	DSFPNFVAC(UniMod:4)K	2	DSFPNFVAC(UniMod:4)K2	31239.6	29577.1	15745.4
P18298	P18298;A0A8I6G8F2	METK2_RAT	Mat2a	S-adenosylmethionine synthase isoform type-2	0	DSFPWEVPK	DSFPWEVPK	2	DSFPWEVPK2	60690.9	63208.2	52755
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	DSFSNEK	DSFSNEK	2	DSFSNEK2	38346.2	59695	52999.8
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	DSFSVFCK	DSFSVFC(UniMod:4)K	2	DSFSVFC(UniMod:4)K2	573280	556304	534608
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	DSFSYSCLQTPVVTDFSPK	DSFSYSC(UniMod:4)LQTPVVTDFSPK	3	DSFSYSC(UniMod:4)LQTPVVTDFSPK3	19161.3	18675.2	19558.5
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	DSFYVPIFYSSK	DSFYVPIFYSSK	2	DSFYVPIFYSSK2	52284.2	51829.7	54103.5
M0R4Z8	M0R4Z8	M0R4Z8_RAT	Gatd1	Glutamine amidotransferase like class 1 domain containing 1	1	DSGAGFSASEPDAVHVVLDR	DSGAGFSASEPDAVHVVLDR	3	DSGAGFSASEPDAVHVVLDR3	12359.5	14489.7	16366
P01015	P01015	ANGT_RAT	Agt	Angiotensinogen	1	DSGALHFLGR	DSGALHFLGR	2	DSGALHFLGR2	51422.5	45370.4	40758.3
F7EUH5	F7EUH5	F7EUH5_RAT	Plxdc2	Plexin domain containing 2	1	DSGASTDDSAAEK	DSGASTDDSAAEK	2	DSGASTDDSAAEK2			4783.19
M0R8J3	M0R8J3	M0R8J3_RAT	Jmy	Junction mediating and regulatory protein, p53 cofactor	1	DSGATTPAETLEK	DSGATTPAETLEK	2	DSGATTPAETLEK2	4751.24	3888.33	7381.83
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	DSGCFRSSGSLLNNAMK	DSGC(UniMod:4)FRSSGSLLNNAMK	3	DSGC(UniMod:4)FRSSGSLLNNAMK3	14414.3	6213.9	15535.7
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	DSGDVAALR	DSGDVAALR	2	DSGDVAALR2	10472.1	9955.36	11127.6
P20786	P20786	PGFRA_RAT	Pdgfra	Platelet-derived growth factor receptor alpha	1	DSGDYECAAR	DSGDYEC(UniMod:4)AAR	2	DSGDYEC(UniMod:4)AAR2	12961.8	15853.9	12712.2
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	DSGEGDTTSLR	DSGEGDTTSLR	2	DSGEGDTTSLR2	9896.28	7807.53	8641.42
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	DSGFFMLR	DSGFFMLR	2	DSGFFMLR2	24544.7	22387.4	16955.3
A0A0G2K712	A0A0G2K712	A0A0G2K712_RAT	Tbc1d5	TBC1 domain family, member 5	1	DSGFTIVSPLDI	DSGFTIVSPLDI	2	DSGFTIVSPLDI2		5448.09	
A0A8I6B5X8	A0A8I6B5X8	A0A8I6B5X8_RAT	Cmc1	COX assembly mitochondrial protein	1	DSGILMVLK	DSGILMVLK	2	DSGILMVLK2	8775.31	9545.74	10183.1
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	DSGIYGHLTYHLVNDFAK	DSGIYGHLTYHLVNDFAK	3	DSGIYGHLTYHLVNDFAK3	37269.2	37370.3	41885.1
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	DSGIYGHLTYHLVNDFAK	DSGIYGHLTYHLVNDFAK	4	DSGIYGHLTYHLVNDFAK4	8522.1		4530.13
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	DSGLPSQGLNFK	DSGLPSQGLNFK	2	DSGLPSQGLNFK2	40254.4	46170.4	43856.2
Q5U2P0	Q5U2P0	DI3L1_RAT	Dis3l	DIS3-like exonuclease 1	1	DSGLVSDILIHGSK	DSGLVSDILIHGSK	3	DSGLVSDILIHGSK3		5798.86	4051.59
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	DSGLYLK	DSGLYLK	2	DSGLYLK2		17976.8	20943.4
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	DSGLYSCTAGIGK	DSGLYSC(UniMod:4)TAGIGK	2	DSGLYSC(UniMod:4)TAGIGK2	39729.9	39446.1	40106.4
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	DSGNIPEAIASYR	DSGNIPEAIASYR	2	DSGNIPEAIASYR2	40532.2	45528.4	47609.5
P24473	P24473	GSTK1_RAT	Gstk1	Glutathione S-transferase kappa 1	1	DSGNQPPAMVPHK	DSGNQPPAMVPHK	2	DSGNQPPAMVPHK2	21330.6	16990.1	23197.4
P24473	P24473	GSTK1_RAT	Gstk1	Glutathione S-transferase kappa 1	1	DSGNQPPAMVPHK	DSGNQPPAMVPHK	3	DSGNQPPAMVPHK3	85177.3	78082.2	97534.4
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	DSGQAIPLVVESCIR	DSGQAIPLVVESC(UniMod:4)IR	2	DSGQAIPLVVESC(UniMod:4)IR2	22071.6	27904.6	6752.53
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	DSGQLTDEYLPEQR	DSGQLTDEYLPEQR	2	DSGQLTDEYLPEQR2	47131.1	50369.3	58329.4
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	DSGRDYVSQFESSTLGK	DSGRDYVSQFESSTLGK	2	DSGRDYVSQFESSTLGK2	855212	965225	951126
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	DSGRDYVSQFESSTLGK	DSGRDYVSQFESSTLGK	3	DSGRDYVSQFESSTLGK3	22237.2	13339.4	13134
Q6AZ83	Q6AZ83	G6PC3_RAT	G6pc3	Glucose-6-phosphatase 3	1	DSGSALGLGIALHTPCYAQIR	DSGSALGLGIALHTPC(UniMod:4)YAQIR	3	DSGSALGLGIALHTPC(UniMod:4)YAQIR3	14944.7	20676.1	12052.7
P19814	P19814	TGON3_RAT	Ttgn1	Trans-Golgi network integral membrane protein TGN38	1	DSGSPTGGDSDNTTGGDSNK	DSGSPTGGDSDNTTGGDSNK	2	DSGSPTGGDSDNTTGGDSNK2			2241.64
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	DSGSVSLQETR	DSGSVSLQETR	2	DSGSVSLQETR2	103861	114557	76378.6
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	DSGTYEQPTPLSR	DSGTYEQPTPLSR	2	DSGTYEQPTPLSR2	70758.7	78928.1	59017.7
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	DSGVDIAAGNMLVK	DSGVDIAAGNMLVK	2	DSGVDIAAGNMLVK2	12850.1	6793.4	8120.38
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	DSGVLVFER	DSGVLVFER	2	DSGVLVFER2	24483.5	21234.9	17675.2
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	DSHADDPESIK	DSHADDPESIK	3	DSHADDPESIK3	7553.38	8684.77	12039.3
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	DSHCHLSSSPR	DSHC(UniMod:4)HLSSSPR	2	DSHC(UniMod:4)HLSSSPR2			4302.38
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	DSHGSVSIVVGAPR	DSHGSVSIVVGAPR	2	DSHGSVSIVVGAPR2	67289.6	55926.2	315650
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	DSHGSVSIVVGAPR	DSHGSVSIVVGAPR	3	DSHGSVSIVVGAPR3	846381	948305	788256
P62278	P62278;M0RCY2	RS13_RAT	Rps13	Small ribosomal subunit protein uS15	0	DSHGVAQVR	DSHGVAQVR	2	DSHGVAQVR2	12459.2	12597.1	10230.6
D3ZDR7	D3ZDR7	D3ZDR7_RAT	Themis2	Thymocyte selection associated family member 2	1	DSHHPTDPLTSFPGLR	DSHHPTDPLTSFPGLR	3	DSHHPTDPLTSFPGLR3	18593.7	5745.08	20339.3
D3ZDR7	D3ZDR7	D3ZDR7_RAT	Themis2	Thymocyte selection associated family member 2	1	DSHHPTDPLTSFPGLR	DSHHPTDPLTSFPGLR	4	DSHHPTDPLTSFPGLR4	14737.4	11536.6	14863.2
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	DSHIQEIVEK	DSHIQEIVEK	2	DSHIQEIVEK2	43907.2	42121.3	45073.3
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	DSHIQEIVEK	DSHIQEIVEK	3	DSHIQEIVEK3	125277	120005	150098
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	DSHITNLK	DSHITNLK	2	DSHITNLK2	40629.7	38760.6	45188.9
O08773	O08773	RGS14_RAT	Rgs14	Regulator of G-protein signaling 14	1	DSHLPPLSSSLSVEDASGSTGK	DSHLPPLSSSLSVEDASGSTGK	3	DSHLPPLSSSLSVEDASGSTGK3	9802.02	9577.78	12255
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	DSHVFFATAK	DSHVFFATAK	2	DSHVFFATAK2	115678	108042	92377.9
P08650	P08650	CO5_RAT	C5	Complement C5	1	DSHVILQLNSIPSR	DSHVILQLNSIPSR	2	DSHVILQLNSIPSR2	11235.4	7013.04	4710.82
P08650	P08650	CO5_RAT	C5	Complement C5	1	DSHVILQLNSIPSR	DSHVILQLNSIPSR	3	DSHVILQLNSIPSR3	197437	159268	161786
P08650	P08650	CO5_RAT	C5	Complement C5	1	DSHVILQLNSIPSRDFLCVR	DSHVILQLNSIPSRDFLC(UniMod:4)VR	4	DSHVILQLNSIPSRDFLC(UniMod:4)VR4	45679.5	47355.4	39860.6
Q5M7T7	Q5M7T7	Q5M7T7_RAT	Pla2g7	Phospholipase A2 group VII	1	DSIDETK	DSIDETK	1	DSIDETK1	3085.67		4215.29
Q5M7T7	Q5M7T7	Q5M7T7_RAT	Pla2g7	Phospholipase A2 group VII	1	DSIDETK	DSIDETK	2	DSIDETK2	74180.6		56955.5
F1LNX8	F1LNX8	F1LNX8_RAT	Cmahp	Cytidine monophosphate-N-acetylneuraminic acid hydroxylase	1	DSIFLHSSWIK	DSIFLHSSWIK	3	DSIFLHSSWIK3	12362.2	9061.39	15711.5
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	DSIFSNLIGQLDYK	DSIFSNLIGQLDYK	2	DSIFSNLIGQLDYK2	37472.9	59012.7	50541.8
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	DSIFSNLIGQLDYK	DSIFSNLIGQLDYK	3	DSIFSNLIGQLDYK3	9081.6	10517.8	21544
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	DSIGDIDSEK	DSIGDIDSEK	2	DSIGDIDSEK2	243204	291226	214805
A0A8I6AEZ7	A0A8I6AEZ7	A0A8I6AEZ7_RAT	Crlf3	Cytokine receptor-like factor 3	1	DSIGVCAEK	DSIGVC(UniMod:4)AEK	1	DSIGVC(UniMod:4)AEK1	2046.35	2568.32	4587.03
A0A8I6AEZ7	A0A8I6AEZ7	A0A8I6AEZ7_RAT	Crlf3	Cytokine receptor-like factor 3	1	DSIGVCAEK	DSIGVC(UniMod:4)AEK	2	DSIGVC(UniMod:4)AEK2	490379	466737	453696
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	DSIISEINR	DSIISEINR	2	DSIISEINR2	107175	99898.8	103815
Q63471	Q63471	BPIA2_RAT	Bpifa2	BPI fold-containing family A member 2	1	DSILETLNK	DSILETLNK	2	DSILETLNK2	99788	123254	97882.5
D4AB17	D4AB17	D4AB17_RAT	Pfas	phosphoribosylformylglycinamidine synthase	1	DSINILAEGRPALEK	DSINILAEGRPALEK	3	DSINILAEGRPALEK3	6131.61	3508.85	3582.71
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	DSIPSEVDYETR	DSIPSEVDYETR	2	DSIPSEVDYETR2	31205	40038	24149.7
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	DSIQLDEDSER	DSIQLDEDSER	2	DSIQLDEDSER2	14013.7	5974.62	7951.8
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	DSIQLDEDSERK	DSIQLDEDSERK	3	DSIQLDEDSERK3	15967	25235.7	26590.4
A0A8I5ZSB0	A0A8I5ZSB0	A0A8I5ZSB0_RAT	Igtp	Interferon gamma induced GTPase	1	DSISHLQK	DSISHLQK	2	DSISHLQK2	2684.9	1612.13	
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	DSISSYETQIAALK	DSISSYETQIAALK	2	DSISSYETQIAALK2	33706.9	36369.7	49522.8
D3ZMI6	D3ZMI6	D3ZMI6_RAT	Olfm4	Olfactomedin 4	1	DSISYTELDFELIK	DSISYTELDFELIK	2	DSISYTELDFELIK2	8352.26	5374.14	5589.34
P01026	P01026	CO3_RAT	C3	Complement C3	1	DSITTWEILAVSLSDK	DSITTWEILAVSLSDK	2	DSITTWEILAVSLSDK2	23379.3	18390.9	8965.38
P01026	P01026	CO3_RAT	C3	Complement C3	1	DSITTWEILAVSLSDKK	DSITTWEILAVSLSDKK	2	DSITTWEILAVSLSDKK2	47944.9	45935	24899.7
P01026	P01026	CO3_RAT	C3	Complement C3	1	DSITTWEILAVSLSDKK	DSITTWEILAVSLSDKK	3	DSITTWEILAVSLSDKK3	520038	381308	347426
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	DSIVHQAGMLK	DSIVHQAGMLK	2	DSIVHQAGMLK2	65406.3	65854.7	60181.5
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	DSIVHQAGMLK	DSIVHQAGMLK	3	DSIVHQAGMLK3	752175	659054	723656
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	DSIVHQAGMLKR	DSIVHQAGMLKR	3	DSIVHQAGMLKR3	33879.1	63992.4	54673.1
A0A8I6A9R8	A0A8I6A9R8	A0A8I6A9R8_RAT	Cope	Coatomer subunit epsilon	1	DSIVLELDR	DSIVLELDR	2	DSIVLELDR2	97059.4	73775.4	79740.3
A0A8I6A9R8	A0A8I6A9R8	A0A8I6A9R8_RAT	Cope	Coatomer subunit epsilon	1	DSIVLELDREMSR	DSIVLELDREMSR	3	DSIVLELDREMSR3	115119	130925	127317
F1LM66	F1LM66	F1LM66_RAT	Eftud2	116 kDa U5 small nuclear ribonucleoprotein component	1	DSIVQGFQWGTR	DSIVQGFQWGTR	2	DSIVQGFQWGTR2	6666.8	13073.4	13726
P09456	P09456	KAP0_RAT	Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit	1	DSIVQLCTARPER	DSIVQLC(UniMod:4)TARPER	3	DSIVQLC(UniMod:4)TARPER3	52118	48715.4	64614
Q4KM77	A0A8I5ZSD0;Q4KM77	EI24_RAT	Ei24	Etoposide-induced protein 2.4 homolog	0	DSIWGICTISK	DSIWGIC(UniMod:4)TISK	2	DSIWGIC(UniMod:4)TISK2	12654.6	20918.7	20292.4
D4AD75	D4AD75	D4AD75_RAT	Dpy19l1	Dpy-19 like C-mannosyltransferase 1	1	DSKPHFTTVFQNSVYK	DSKPHFTTVFQNSVYK	3	DSKPHFTTVFQNSVYK3	3010.02	3755.22	3409.05
D4AD75	D4AD75	D4AD75_RAT	Dpy19l1	Dpy-19 like C-mannosyltransferase 1	1	DSKPHFTTVFQNSVYK	DSKPHFTTVFQNSVYK	4	DSKPHFTTVFQNSVYK4	4794.44	5443.45	3712.87
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	DSLADMSEELCPSSADTPVPLPFFVR	DSLADMSEELC(UniMod:4)PSSADTPVPLPFFVR	3	DSLADMSEELC(UniMod:4)PSSADTPVPLPFFVR3	9715.9	6514.95	5171.57
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	DSLAEVEEK	DSLAEVEEK	2	DSLAEVEEK2	142132	149987	153511
B1WBV3	B1WBV3	B1WBV3_RAT	Gfod2	Glucose-fructose oxidoreductase domain containing 2	1	DSLAVGAGLPEQGPQDVPLLYLK	DSLAVGAGLPEQGPQDVPLLYLK	3	DSLAVGAGLPEQGPQDVPLLYLK3		8567.82	1689.43
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	DSLDAWK	DSLDAWK	2	DSLDAWK2	21939.4	25127.6	22109.5
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	DSLDDLFPNEEEEDSSNDLSR	DSLDDLFPNEEEEDSSNDLSR	3	DSLDDLFPNEEEEDSSNDLSR3	11926.1	8208.09	3300.68
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	DSLDDQDDLLGFDASEVELTR	DSLDDQDDLLGFDASEVELTR	3	DSLDDQDDLLGFDASEVELTR3	1973.87	6101.8	3680.87
O35964	O35964	SH3G1_RAT	Sh3gl1	Endophilin-A2	1	DSLDIEVK	DSLDIEVK	2	DSLDIEVK2	80989.5	85437.3	78213.8
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	DSLDPQALSDEVR	DSLDPQALSDEVR	2	DSLDPQALSDEVR2	245115	258268	271550
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	DSLDQLLQK	DSLDQLLQK	2	DSLDQLLQK2	23115.3	20690.9	10834.2
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	DSLEDVSVDVTQK	DSLEDVSVDVTQK	2	DSLEDVSVDVTQK2	9225.25		8247.88
D3ZH14	D3ZH14	D3ZH14_RAT	Tmcc1	Transmembrane and coiled-coil domain family 1	1	DSLEEGQVDDGGK	DSLEEGQVDDGGK	2	DSLEEGQVDDGGK2	1718.74	3010.37	4097.6
G3V8G2	G3V8G2	G3V8G2_RAT	Psmd5	26S proteasome non-ATPase regulatory subunit 5	1	DSLELFR	DSLELFR	2	DSLELFR2	42356.4	47339.5	46109.1
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	DSLETNVNR	DSLETNVNR	2	DSLETNVNR2	221303	204013	197366
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	DSLFQDFK	DSLFQDFK	2	DSLFQDFK2	23507.7	27027	22421.3
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	DSLFQDFKR	DSLFQDFKR	3	DSLFQDFKR3	35821.8	45049.1	48414.1
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	DSLGEELFK	DSLGEELFK	2	DSLGEELFK2	245993	265292	252096
B2GV52	B2GV52	BL1S5_RAT	Bloc1s5	Biogenesis of lysosome-related organelles complex 1 subunit 5	1	DSLGTAGAAHLIIK	DSLGTAGAAHLIIK	3	DSLGTAGAAHLIIK3	6180.76	2080.34	6115.85
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	DSLHQPQYVEK	DSLHQPQYVEK	2	DSLHQPQYVEK2	9085.11	3964.86	6001.32
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	DSLHQPQYVEK	DSLHQPQYVEK	3	DSLHQPQYVEK3	25521.3	42065.6	50341.5
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	DSLINFK	DSLINFK	2	DSLINFK2	87886.4	90106.4	80271.8
D4AAE9	D4AAE9	D4AAE9_RAT	Cisd2	CDGSH iron-sulfur domain-containing protein 2	1	DSLINLK	DSLINLK	2	DSLINLK2	224909	214533	200833
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	DSLKETIEELR	DSLKETIEELR	3	DSLKETIEELR3	20556.5	22137.5	17418.2
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	DSLLASLLDGVR	DSLLASLLDGVR	2	DSLLASLLDGVR2	9080.35	16028.9	10123.5
A0A8I6AAW1	A0A8I6AAW1	A0A8I6AAW1_RAT	Tars3	threonine--tRNA ligase	1	DSLLEMFK	DSLLEMFK	2	DSLLEMFK2	3909.21	3797.67	
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	DSLLGGVLR	DSLLGGVLR	2	DSLLGGVLR2	68105.4	49604.1	76817
P62963	P62963	PROF1_RAT	Pfn1	Profilin-1	1	DSLLQDGEFTMDLR	DSLLQDGEFTMDLR	2	DSLLQDGEFTMDLR2	437454	462207	424003
P62963	P62963	PROF1_RAT	Pfn1	Profilin-1	1	DSLLQDGEFTMDLR	DSLLQDGEFTMDLR	3	DSLLQDGEFTMDLR3	71759.8	61379.8	60094.1
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	DSLLQEFR	DSLLQEFR	2	DSLLQEFR2	2.99399e+06	3.08109e+06	2.95447e+06
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	DSLLTLK	DSLLTLK	2	DSLLTLK2	55917.4	56168.1	53134.6
Q793F9	Q793F9	VPS4A_RAT	Vps4a	Vacuolar protein sorting-associated protein 4A	1	DSLMQPVR	DSLMQPVR	2	DSLMQPVR2	10785.3	7139.74	5629.45
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	DSLNSIALK	DSLNSIALK	2	DSLNSIALK2	63413.5	59586.3	64492.9
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	DSLPSLDLASATSGDK	DSLPSLDLASATSGDK	2	DSLPSLDLASATSGDK2	431630	464227	400430
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	DSLPVIAAPSMWTR	DSLPVIAAPSMWTR	2	DSLPVIAAPSMWTR2	32857	32634.7	27194.8
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	DSLPVIAAPSMWTRPQIK	DSLPVIAAPSMWTRPQIK	3	DSLPVIAAPSMWTRPQIK3	151394	155931	164321
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	DSLPYNVEK	DSLPYNVEK	2	DSLPYNVEK2	81408.3	94893.4	86282.3
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	DSLQASR	DSLQASR	2	DSLQASR2	32066.9		25986.8
D4A529	D4A529	D4A529_RAT	She	Src homology 2 domain containing E	1	DSLQGLIQAAAGK	DSLQGLIQAAAGK	2	DSLQGLIQAAAGK2	41127	30107.5	31121.4
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	DSLQPYEAAYLSK	DSLQPYEAAYLSK	2	DSLQPYEAAYLSK2	44377	37524.8	45729
Q5BK07	Q5BK07	CCD43_RAT	Ccdc43	Coiled-coil domain-containing protein 43	1	DSLRDESQRK	DSLRDESQRK	3	DSLRDESQRK3			10467.9
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	DSLRPMIER	DSLRPMIER	2	DSLRPMIER2	6870.86	4902.31	
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	DSLRPSMIDELYLPK	DSLRPSMIDELYLPK	2	DSLRPSMIDELYLPK2	134494	97599.3	113085
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	DSLRPSMIDELYLPK	DSLRPSMIDELYLPK	3	DSLRPSMIDELYLPK3	1.6742e+06	1.64662e+06	1.68567e+06
Q4V8F9	Q4V8F9	HSDL2_RAT	Hsdl2	Hydroxysteroid dehydrogenase-like protein 2	1	DSLSDEVVR	DSLSDEVVR	2	DSLSDEVVR2		18319.6	10131.1
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	DSLSHDFNGLNLSK	DSLSHDFNGLNLSK	3	DSLSHDFNGLNLSK3	26472	27132.5	
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	DSLSHQLSATSYSSAHSCSR	DSLSHQLSATSYSSAHSC(UniMod:4)SR	3	DSLSHQLSATSYSSAHSC(UniMod:4)SR3	1052.55	631.044	
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	DSLSHQLSATSYSSAHSCSR	DSLSHQLSATSYSSAHSC(UniMod:4)SR	4	DSLSHQLSATSYSSAHSC(UniMod:4)SR4	6602.68	5635.83	3312.41
D4AB17	D4AB17	D4AB17_RAT	Pfas	phosphoribosylformylglycinamidine synthase	1	DSLSMAAR	DSLSMAAR	2	DSLSMAAR2	10554.8	8418.84	
D3ZL11	D3ZL11	D3ZL11_RAT	Rbsn	Rabenosyn, RAB effector	1	DSLSTHTSPSQSPNSVHGSR	DSLSTHTSPSQSPNSVHGSR	4	DSLSTHTSPSQSPNSVHGSR4	3757.86	3734.42	3573.84
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	DSLTETLPMVHMTGAVSGYSFK	DSLTETLPMVHMTGAVSGYSFK	3	DSLTETLPMVHMTGAVSGYSFK3	11915.5	20160.8	
Q6IUP3	Q6IUP3	ELP5_RAT	Elp5	Elongator complex protein 5	1	DSLTLPFQFSSEK	DSLTLPFQFSSEK	2	DSLTLPFQFSSEK2	22944.8	23320.4	11004
D4ADE8	D4ADE8;A0A8I6A7A4	D4ADE8_RAT	Ddx3x	RNA helicase	0	DSLTLVFVETK	DSLTLVFVETK	2	DSLTLVFVETK2	8514.1	6526.29	6160.54
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	DSLTVQVTFDCDCDCQAFAQPLSPR	DSLTVQVTFDC(UniMod:4)DC(UniMod:4)DC(UniMod:4)QAFAQPLSPR	3	DSLTVQVTFDC(UniMod:4)DC(UniMod:4)DC(UniMod:4)QAFAQPLSPR3	184978	110865	118103
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	DSLVALLEEQR	DSLVALLEEQR	2	DSLVALLEEQR2	17993.7	20865.4	12010.1
Q7TP21	Q7TP21	Q7TP21_RAT	Rpa1	Replication protein A subunit	1	DSLVDIIGICK	DSLVDIIGIC(UniMod:4)K	2	DSLVDIIGIC(UniMod:4)K2	5743.12	4442.74	
P83883	P83883;M0R7E5;A0A8I6A205	RL36A_RAT	Rpl36a	Large ribosomal subunit protein eL42	0	DSLYAQGK	DSLYAQGK	2	DSLYAQGK2	33789.5	29793	33012.4
B5DFI7	B5DFI7	B5DFI7_RAT	Qpctl	glutaminyl-peptide cyclotransferase	1	DSLYGSR	DSLYGSR	2	DSLYGSR2	8216.33		10390.3
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	DSMDELFSHR	DSMDELFSHR	2	DSMDELFSHR2	9427.76	5848.36	5504.31
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	DSMDELFSHR	DSMDELFSHR	3	DSMDELFSHR3	35350.1	40787.3	37720.6
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	DSMFGIAVK	DSMFGIAVK	1	DSMFGIAVK1	14741.3	11976.4	11532.4
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	DSMFGIAVK	DSMFGIAVK	2	DSMFGIAVK2	233227	255676	280484
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	DSMIWDCTCIGAGR	DSMIWDC(UniMod:4)TC(UniMod:4)IGAGR	2	DSMIWDC(UniMod:4)TC(UniMod:4)IGAGR2	47406.2	45346.2	45288.8
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	DSMIWDCTCIGAGR	DSMIWDC(UniMod:4)TC(UniMod:4)IGAGR	3	DSMIWDC(UniMod:4)TC(UniMod:4)IGAGR3	2.21408e+06	2.56734e+06	2.48425e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	DSMIWDCTCIGAGRGR	DSMIWDC(UniMod:4)TC(UniMod:4)IGAGRGR	3	DSMIWDC(UniMod:4)TC(UniMod:4)IGAGRGR3	9219.89	10511.3	15661.2
D3ZTC4	D3ZTC4	D3ZTC4_RAT	Ccdc88b	Coiled-coil domain containing 88B	1	DSMLPVTNGAPAAPLALDHSPK	DSMLPVTNGAPAAPLALDHSPK	3	DSMLPVTNGAPAAPLALDHSPK3			1886.95
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	DSMLVLLPVLLNK	DSMLVLLPVLLNK	2	DSMLVLLPVLLNK2	6349.17		
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	DSMLVLLPVLLNK	DSMLVLLPVLLNK	3	DSMLVLLPVLLNK3	1833.27	1485.32	
Q9JMB3	Q9JMB3	Q9JMB3_RAT	Epb41l3	Erythrocyte membrane protein band 4.1-like 3	1	DSMSAAEVGTGQYATTK	DSMSAAEVGTGQYATTK	2	DSMSAAEVGTGQYATTK2		4148.03	2567.87
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	DSMTGQMSGESNMK	DSMTGQMSGESNMK	2	DSMTGQMSGESNMK2	746679	808148	682490
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	DSMTGQMSGESNMK	DSMTGQMSGESNMK	3	DSMTGQMSGESNMK3			2553.86
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	DSNACYGFR	DSNAC(UniMod:4)YGFR	2	DSNAC(UniMod:4)YGFR2	4820.02	9643.23	8999.07
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	DSNEDVSEPK	DSNEDVSEPK	2	DSNEDVSEPK2		2568.96	
D4ACC1	D4ACC1	D4ACC1_RAT	Dapp1	Dual adaptor of phosphotyrosine and 3-phosphoinositides 1	1	DSNEQTGLYSLSVR	DSNEQTGLYSLSVR	2	DSNEQTGLYSLSVR2	17767.9	14511.8	15513.3
D4A031	D4A031	D4A031_RAT	Ddx42	DEAD-box helicase 42	1	DSNFAGDLVR	DSNFAGDLVR	2	DSNFAGDLVR2	6166.78		14857.2
Q62598	Q62598	DSPP_RAT	Dspp	Dentin sialophosphoprotein	1	DSNGHHGMELDK	DSNGHHGMELDK	3	DSNGHHGMELDK3	26437.9	36087.8	
Q62598	Q62598	DSPP_RAT	Dspp	Dentin sialophosphoprotein	1	DSNGHHGMELDKR	DSNGHHGMELDKR	2	DSNGHHGMELDKR2	19525.1		20357.1
Q62598	Q62598	DSPP_RAT	Dspp	Dentin sialophosphoprotein	1	DSNGHHGMELDKR	DSNGHHGMELDKR	3	DSNGHHGMELDKR3	8870.99		3645.52
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	DSNGNLELAVAFLTAK	DSNGNLELAVAFLTAK	2	DSNGNLELAVAFLTAK2	1687.94	2746.18	
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	DSNIPGSDYINANYVK	DSNIPGSDYINANYVK	2	DSNIPGSDYINANYVK2	79446.2	91433.1	83389.8
A0A8I5ZQQ3	A0A8I5ZQQ3	A0A8I5ZQQ3_RAT	Pdpr	Pyruvate dehydrogenase phosphatase regulatory subunit	1	DSNLLLEDVTWK	DSNLLLEDVTWK	2	DSNLLLEDVTWK2	4647.41	5306.17	
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	DSNSLTR	DSNSLTR	1	DSNSLTR1	55040.5	46944.6	35433.7
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	DSNSLTR	DSNSLTR	2	DSNSLTR2	3.86633e+07	47218.5	3.80718e+07
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	DSNSPEPSSCR	DSNSPEPSSC(UniMod:4)R	2	DSNSPEPSSC(UniMod:4)R2	1897.87		30855.5
Q68FQ5	Q68FQ5	Q68FQ5_RAT	Mtif2	Mitochondrial translational initiation factor 2	1	DSNVLPIIIK	DSNVLPIIIK	2	DSNVLPIIIK2	1000.38		
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	DSNWISK	DSNWISK	1	DSNWISK1	1496.31	2446.55	3622.65
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	DSNWISK	DSNWISK	2	DSNWISK2	51357.9	58405	66985.7
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	DSNYHLLMSVQESLER	DSNYHLLMSVQESLER	3	DSNYHLLMSVQESLER3	55987.1	34239.8	62271.8
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	DSPDVTNR	DSPDVTNR	2	DSPDVTNR2	49431.2		44969.6
P13264	P13264	GLSK_RAT	Gls	Glutaminase kidney isoform, mitochondrial	1	DSPGETDAFGNSEGK	DSPGETDAFGNSEGK	2	DSPGETDAFGNSEGK2	7167.15	4118.71	3583.54
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	DSPGFLR	DSPGFLR	2	DSPGFLR2	34768.8	39820.1	33303
A0A8I6AVZ7	A0A8I6AVZ7	A0A8I6AVZ7_RAT	Mtcl1	Microtubule crosslinking factor 1	1	DSPIGTLGK	DSPIGTLGK	2	DSPIGTLGK2	5091.1	5196.32	2564.47
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	DSPLLLQQISAMR	DSPLLLQQISAMR	2	DSPLLLQQISAMR2	209692	266759	235175
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	DSPLLLQQISAMR	DSPLLLQQISAMR	3	DSPLLLQQISAMR3	10676.3	10391.1	17329.5
A0A0G2K9M5	A0A0G2K9M5	A0A0G2K9M5_RAT	Tbc1d8b	TBC1 domain family member 8B	1	DSPLPSNVQQGSNINDGK	DSPLPSNVQQGSNINDGK	2	DSPLPSNVQQGSNINDGK2	1443.53		2182.32
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	DSPLQGSGQQNSQAGQR	DSPLQGSGQQNSQAGQR	2	DSPLQGSGQQNSQAGQR2	10390.8	6162.55	8958.93
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	DSPLQGSGQQNSQAGQR	DSPLQGSGQQNSQAGQR	3	DSPLQGSGQQNSQAGQR3	2292.69	3831.36	5465.39
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	DSPPASSNIVQGQIK	DSPPASSNIVQGQIK	2	DSPPASSNIVQGQIK2	4033.39	1475.95	
Q2THW7	Q2THW7	ZDHC5_RAT	Zdhhc5	Palmitoyltransferase ZDHHC5	1	DSPPTPTMYK	DSPPTPTMYK	2	DSPPTPTMYK2	32302	27388.6	31419
Q9QYF3	Q9QYF3	MYO5A_RAT	Myo5a	Unconventional myosin-Va	1	DSPQLLMDAK	DSPQLLMDAK	2	DSPQLLMDAK2	12123.9	15508.5	5271.07
Q32Q54	Q32Q54	Q32Q54_RAT	Uqcc1	Ubiquinol-cytochrome c reductase complex assembly factor 1	1	DSPQPVEEK	DSPQPVEEK	2	DSPQPVEEK2		6592	
P62963	P62963	PROF1_RAT	Pfn1	Profilin-1	1	DSPSVWAAVPGK	DSPSVWAAVPGK	2	DSPSVWAAVPGK2	5.76697e+06	5.83561e+06	6.31153e+06
P62963	P62963	PROF1_RAT	Pfn1	Profilin-1	1	DSPSVWAAVPGK	DSPSVWAAVPGK	3	DSPSVWAAVPGK3	11392.1	8425.26	11252.5
Q5FVC7	Q5FVC7	ACAP2_RAT	Acap2	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2	1	DSPTVVVEDLR	DSPTVVVEDLR	2	DSPTVVVEDLR2	15780.6	15503.7	29573.9
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	DSPVLSNSGPR	DSPVLSNSGPR	2	DSPVLSNSGPR2	43055.6	57987.8	41473.4
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	DSPVLVDSFEDSEPYR	DSPVLVDSFEDSEPYR	2	DSPVLVDSFEDSEPYR2	504676	450707	507274
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	DSPVLVDSFEDSEPYR	DSPVLVDSFEDSEPYR	3	DSPVLVDSFEDSEPYR3	30646.8	29805.3	28333.9
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	DSPVLVDSFEDSEPYRK	DSPVLVDSFEDSEPYRK	3	DSPVLVDSFEDSEPYRK3	3.22476e+06	3.39161e+06	3.51657e+06
F1MA46	F1MA46	F1MA46_RAT	Pcdh12	Protocadherin 12	1	DSPVSHLVIIDSETGEVTAQR	DSPVSHLVIIDSETGEVTAQR	3	DSPVSHLVIIDSETGEVTAQR3	55882.1	66039.6	69323.2
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	DSQDPYCGWCVIEGR	DSQDPYC(UniMod:4)GWC(UniMod:4)VIEGR	2	DSQDPYC(UniMod:4)GWC(UniMod:4)VIEGR2	37319.1	43567.2	46123.6
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	DSQEDWTTFTHDR	DSQEDWTTFTHDR	3	DSQEDWTTFTHDR3	3532.5	7105.27	7711.69
A0A140TAA1	A0A140TAA1	A0A140TAA1_RAT	Igsf8	Immunoglobulin superfamily, member 8	1	DSQFSYAVFGPR	DSQFSYAVFGPR	2	DSQFSYAVFGPR2	2221.97	5200.58	7703.05
Q66HC5	Q66HC5	NUP93_RAT	Nup93	Nuclear pore complex protein Nup93	1	DSQGENMFLR	DSQGENMFLR	2	DSQGENMFLR2	5254.6	6754.43	
P23785	P23785	GRN_RAT	Grn	Progranulin	1	DSQGGWACCPYVK	DSQGGWAC(UniMod:4)C(UniMod:4)PYVK	2	DSQGGWAC(UniMod:4)C(UniMod:4)PYVK2	20815.9	19242.3	14056.7
O89035	O89035	DIC_RAT	Slc25a10	Mitochondrial dicarboxylate carrier	1	DSQGPLPFYSK	DSQGPLPFYSK	2	DSQGPLPFYSK2	6678.92	12161.4	11700.8
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	DSQHHYSNLFNHCAILER	DSQHHYSNLFNHC(UniMod:4)AILER	4	DSQHHYSNLFNHC(UniMod:4)AILER4	9656.2	9339.68	14172.9
P0C5H9	P0C5H9	MANF_RAT	Manf	Mesencephalic astrocyte-derived neurotrophic factor	1	DSQICELK	DSQIC(UniMod:4)ELK	2	DSQIC(UniMod:4)ELK2	30387.9	21207.5	29646.4
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	DSQITASGYHGLWTPQLAR	DSQITASGYHGLWTPQLAR	3	DSQITASGYHGLWTPQLAR3	284105	349222	309257
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	DSQIYSEDTGGTEAVR	DSQIYSEDTGGTEAVR	2	DSQIYSEDTGGTEAVR2	34191.9	32295.9	40650.8
Q3ZU82	Q3ZU82	GOGA5_RAT	Golga5	Golgin subfamily A member 5	1	DSQLAVLK	DSQLAVLK	2	DSQLAVLK2	9300.26	6523.48	4752.91
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	DSQLFNTGTDFK	DSQLFNTGTDFK	2	DSQLFNTGTDFK2	25337.4	19794.4	26949.6
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	DSQMVVDSFK	DSQMVVDSFK	2	DSQMVVDSFK2	125644	122304	127775
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	DSQPPSPSLLEEPK	DSQPPSPSLLEEPK	2	DSQPPSPSLLEEPK2	212890	218082	208319
D3ZER6	D3ZER6	D3ZER6_RAT	Tnpo2	Transportin 2	1	DSQSPNTATQR	DSQSPNTATQR	2	DSQSPNTATQR2			26980.4
F1LQ09	F1LQ09	F1LQ09_RAT	Atl2	Atlastin GTPase 2	1	DSQSWIGGSNEPLTGFTWR	DSQSWIGGSNEPLTGFTWR	3	DSQSWIGGSNEPLTGFTWR3	11743.9	11086	5576
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	DSQTQAILTK	DSQTQAILTK	2	DSQTQAILTK2	99243.5	86110.5	73201.3
A0A8I5ZNG4	A0A8I5ZNG4	A0A8I5ZNG4_RAT	Rictor	RPTOR independent companion of MTOR, complex 2	1	DSQVLQHK	DSQVLQHK	2	DSQVLQHK2	6653.53		
A0A8I5ZWC6	A0A8I5ZWC6	A0A8I5ZWC6_RAT	Kpna3	Importin subunit alpha	1	DSQVVQVVLDGLK	DSQVVQVVLDGLK	2	DSQVVQVVLDGLK2	18940.1	16556.7	12916.7
A0A8I5ZWC6	A0A8I5ZWC6	A0A8I5ZWC6_RAT	Kpna3	Importin subunit alpha	1	DSQVVQVVLDGLK	DSQVVQVVLDGLK	3	DSQVVQVVLDGLK3		4503.25	4025.84
F7EUW3	F7EUW3	F7EUW3_RAT	C2cd2l	C2CD2-like	1	DSRPASAAEPGGSLR	DSRPASAAEPGGSLR	3	DSRPASAAEPGGSLR3	51935.5	51196.1	60163.9
D3ZW15	D3ZW15	D3ZW15_RAT	Sec24b	SEC24 homolog B, COPII coat complex component	1	DSRPLSPVLHVVK	DSRPLSPVLHVVK	3	DSRPLSPVLHVVK3	2978.66	3597.59	8838.14
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	DSSAENLDASQER	DSSAENLDASQER	2	DSSAENLDASQER2	3941.8	7135.97	6569.6
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	DSSCGTGYELTEDNNCK	DSSC(UniMod:4)GTGYELTEDNNC(UniMod:4)K	2	DSSC(UniMod:4)GTGYELTEDNNC(UniMod:4)K2	402737	264574	246231
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	DSSCGTGYELTEDNNCK	DSSC(UniMod:4)GTGYELTEDNNC(UniMod:4)K	3	DSSC(UniMod:4)GTGYELTEDNNC(UniMod:4)K3	193731	126758	113979
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	DSSCIVTSGK	DSSC(UniMod:4)IVTSGK	2	DSSC(UniMod:4)IVTSGK2	19682.7	22141.8	15003.9
Q9QZL2	Q9QZL2	CHST3_RAT	Chst3	Carbohydrate sulfotransferase 3	1	DSSDVYSTQK	DSSDVYSTQK	2	DSSDVYSTQK2	31128.6	48480.2	45442.9
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	DSSEATLSEALTDFSVK	DSSEATLSEALTDFSVK	2	DSSEATLSEALTDFSVK2	77076	85400	57495.2
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	DSSEATLSEALTDFSVK	DSSEATLSEALTDFSVK	3	DSSEATLSEALTDFSVK3	49060.7	37117.9	30618.9
D4A3X1	D4A3X1	D4A3X1_RAT	RGD1308601	RIKEN cDNA 8030462N17 gene	1	DSSESQLASTESDKPTTGR	DSSESQLASTESDKPTTGR	3	DSSESQLASTESDKPTTGR3	11035.5	17696.4	11387.2
A0A8I5ZVX1	A0A8I5ZVX1	A0A8I5ZVX1_RAT	Ppfibp2	PPFIA binding protein 2	1	DSSFLAEQK	DSSFLAEQK	2	DSSFLAEQK2	8648.71	9530.5	8829.04
Q9JI92	Q9JI92	SDCB1_RAT	Sdcbp	Syntenin-1	1	DSSGHVGFIFK	DSSGHVGFIFK	2	DSSGHVGFIFK2	24615	30517.2	19897.7
Q9JI92	Q9JI92	SDCB1_RAT	Sdcbp	Syntenin-1	1	DSSGHVGFIFK	DSSGHVGFIFK	3	DSSGHVGFIFK3	178459	166619	178808
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	DSSGPANSTTDLLK	DSSGPANSTTDLLK	2	DSSGPANSTTDLLK2	3104.2	7078.94	15869.8
D4ADE8	D4ADE8	D4ADE8_RAT	Ddx3x	RNA helicase	1	DSSGWSSSK	DSSGWSSSK	2	DSSGWSSSK2	26142	29142.4	30451.7
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	DSSIHGPGPIFVK	DSSIHGPGPIFVK	3	DSSIHGPGPIFVK3	9103.88	7581.57	9602.56
Q9R1J4	Q9R1J4	MYOC_RAT	Myoc	Myocilin	1	DSSIQHADLESTK	DSSIQHADLESTK	3	DSSIQHADLESTK3	10017.9	9697.8	5454.93
B5DEH0	B5DEH0	LIMD1_RAT	Limd1	LIM domain-containing protein 1	1	DSSLGYEAPGR	DSSLGYEAPGR	2	DSSLGYEAPGR2	12903.5	15519.8	22829.5
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	DSSLHLK	DSSLHLK	2	DSSLHLK2	7152.77	5182.96	4080.35
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	DSSLLTIPNIEQHHLHLFR	DSSLLTIPNIEQHHLHLFR	4	DSSLLTIPNIEQHHLHLFR4	10358.4	15573.5	
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	DSSLVQLSESK	DSSLVQLSESK	2	DSSLVQLSESK2	15530.6	11424.3	8991.68
Q53B90	Q53B90	RAB43_RAT	Rab43	Ras-related protein Rab-43	1	DSSNVEEAFTR	DSSNVEEAFTR	2	DSSNVEEAFTR2	14932.7	8334.39	9568.8
A0A8I6A5F4	A0A8I6A5F4	A0A8I6A5F4_RAT	Tmem40	Transmembrane protein 40	1	DSSPGADHGELEVLK	DSSPGADHGELEVLK	2	DSSPGADHGELEVLK2	21274.2	19943.9	23624.9
A0A8I6A5F4	A0A8I6A5F4	A0A8I6A5F4_RAT	Tmem40	Transmembrane protein 40	1	DSSPGADHGELEVLK	DSSPGADHGELEVLK	3	DSSPGADHGELEVLK3	117466	141861	165797
P16391	P16391	HA12_RAT		RT1 class I histocompatibility antigen, AA alpha chain	1	DSSQSSDVSLPDCK	DSSQSSDVSLPDC(UniMod:4)K	2	DSSQSSDVSLPDC(UniMod:4)K2	51963.3	36450.4	46039.3
P16391	P16391	HA12_RAT		RT1 class I histocompatibility antigen, AA alpha chain	1	DSSQSSDVSLPDCKA	DSSQSSDVSLPDC(UniMod:4)KA	2	DSSQSSDVSLPDC(UniMod:4)KA2	119894	102242	93946.9
E9PT90	E9PT90	E9PT90_RAT	Spart	Spartin	1	DSSSEEVNLR	DSSSEEVNLR	2	DSSSEEVNLR2	12602.9	9550.96	10358.6
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	DSSSPSLR	DSSSPSLR	2	DSSSPSLR2	30543	24802.4	33121.5
D3ZFK8	D3ZFK8	D3ZFK8_RAT	Farp2	FERM, ARH/RhoGEF and pleckstrin domain protein 2	1	DSSSSPVDPQAPHIK	DSSSSPVDPQAPHIK	3	DSSSSPVDPQAPHIK3	4796.97	5510.57	4096.04
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	DSSSVVEWTQAPK	DSSSVVEWTQAPK	2	DSSSVVEWTQAPK2	32056.8	41708.3	22069.3
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	DSSTGANSYVIIK	DSSTGANSYVIIK	2	DSSTGANSYVIIK2	29193.8	31082	32621.8
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	DSSTGHLWAYTER	DSSTGHLWAYTER	3	DSSTGHLWAYTER3	10353.4	11879.5	11567
A0A8I6ALW9	A0A8I6ALW9	A0A8I6ALW9_RAT	ENSRNOG00000065952	Ig-like domain-containing protein	1	DSSTINYTPSLK	DSSTINYTPSLK	2	DSSTINYTPSLK2	284859	256631	285599
A0A8I6ALW9	A0A8I6ALW9	A0A8I6ALW9_RAT	ENSRNOG00000065952	Ig-like domain-containing protein	1	DSSTINYTPSLKDK	DSSTINYTPSLKDK	3	DSSTINYTPSLKDK3	12687.1	20899.6	11515.2
Q63768	Q63768	CRK_RAT	Crk	Adapter molecule crk	1	DSSTSPGDYVLSVSENSR	DSSTSPGDYVLSVSENSR	2	DSSTSPGDYVLSVSENSR2	6450.19	6034.19	9955.59
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	DSSTWLTAFVLK	DSSTWLTAFVLK	2	DSSTWLTAFVLK2	27199.7	60629.3	71028.7
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	DSSTWLTAFVLK	DSSTWLTAFVLK	3	DSSTWLTAFVLK3	1.05886e+06	843901	1.29319e+06
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	DSSVDFQFSYFK	DSSVDFQFSYFK	2	DSSVDFQFSYFK2	1.46525e+06	1.0186e+06	919344
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	DSSVEVR	DSSVEVR	2	DSSVEVR2	259777	316126	336200
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	DSSVFILGNTDRPDASAVYLQDFQR	DSSVFILGNTDRPDASAVYLQDFQR	3	DSSVFILGNTDRPDASAVYLQDFQR3	55817.1	77126.5	52196.9
D3ZPF2	D3ZPF2	D3ZPF2_RAT	Mcat	Malonyl-CoA-acyl carrier protein transacylase	1	DSSVTEEGVQEAVAR	DSSVTEEGVQEAVAR	2	DSSVTEEGVQEAVAR2	3354.85	4921.81	2026.84
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	DSSYCSSFTISR	DSSYC(UniMod:4)SSFTISR	2	DSSYC(UniMod:4)SSFTISR2	101147	65232.4	40386.6
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	DSSYCSSFTISRPLSPSALIAVEIK	DSSYC(UniMod:4)SSFTISRPLSPSALIAVEIK	3	DSSYC(UniMod:4)SSFTISRPLSPSALIAVEIK3	92150.4	99940.2	53899.5
A0A1W2Q5Z7	A0A1W2Q5Z7	A0A1W2Q5Z7_RAT	St3gal1	ST3 beta-galactoside alpha-2,3-sialyltransferase 1	1	DSSYGPEIDSHDFVLR	DSSYGPEIDSHDFVLR	3	DSSYGPEIDSHDFVLR3	53776.4	61292.4	50934.4
Q5M890	Q5M890	Q5M890_RAT	Apon	Apolipoprotein N	1	DSTETLILESQK	DSTETLILESQK	2	DSTETLILESQK2	6676.83	9002.65	8073.46
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	DSTEVEISTGER	DSTEVEISTGER	2	DSTEVEISTGER2	8347.01	5359.54	9315.78
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	DSTEVPDTSVSGSK	DSTEVPDTSVSGSK	2	DSTEVPDTSVSGSK2	37754.5	52268.4	42034.5
Q499P8	Q499P8	RUSF1_RAT	Rusf1	RUS family member 1	1	DSTGMLGR	DSTGMLGR	2	DSTGMLGR2	13480.2	12135.2	7649.85
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	DSTHSTQITCYTR	DSTHSTQITC(UniMod:4)YTR	3	DSTHSTQITC(UniMod:4)YTR3	18847	17287.3	12004.8
P62260	Q5EBB0;P35213;P62260;P63102;P68255;P61983;P68511;G3V9A3	1433E_RAT	Ywhae	14-3-3 protein epsilon	0	DSTLIMQLLR	DSTLIMQLLR	2	DSTLIMQLLR2	26521.3	21479	21754.5
P62260	Q5EBB0;P35213;P62260;P63102;P68255;P61983;P68511;G3V9A3	1433E_RAT	Ywhae	14-3-3 protein epsilon	0	DSTLIMQLLR	DSTLIMQLLR	3	DSTLIMQLLR3	27056.2	18644.4	22206.5
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	DSTLLQDK	DSTLLQDK	1	DSTLLQDK1	1518.5	3152.97	3449.48
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	DSTLLQDK	DSTLLQDK	2	DSTLLQDK2	79237	106801	108872
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	DSTLLQDKYEHMLK	DSTLLQDKYEHMLK	3	DSTLLQDKYEHMLK3	8257.19	7801.91	19136
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	DSTLLQDKYEHMLK	DSTLLQDKYEHMLK	4	DSTLLQDKYEHMLK4	8891.81	10054.3	2737.03
D4A1A5	D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	DSTLTEPVVMALLK	DSTLTEPVVMALLK	2	DSTLTEPVVMALLK2	43160.7	57258.9	47007.1
P05544	A0A0G2JSK1;P05544	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	DSTMEEILEGLK	DSTMEEILEGLK	2	DSTMEEILEGLK2	1.51694e+06	1.60837e+06	1.64526e+06
P05544	A0A0G2JSK1;P05544	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	DSTMEEILEGLK	DSTMEEILEGLK	3	DSTMEEILEGLK3	28206.8	43364	35101.7
Q99P75	Q99P75	RAB9A_RAT	Rab9a	Ras-related protein Rab-9A	1	DSTNVAAAFEEAVR	DSTNVAAAFEEAVR	2	DSTNVAAAFEEAVR2			7914.06
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	DSTPVDK	DSTPVDK	1	DSTPVDK1	3763.93	4476.22	
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	DSTTSDVIR	DSTTSDVIR	2	DSTTSDVIR2	56123.7	54734.7	55372.8
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	DSTTSDVIRDVVASLHLDGSK	DSTTSDVIRDVVASLHLDGSK	3	DSTTSDVIRDVVASLHLDGSK3	12219.1	7853.2	10578.1
Q9WVB1	Q9WVB1	RAB6A_RAT	Rab6a	Ras-related protein Rab-6A	1	DSTVAVVVYDITNVNSFQQTTK	DSTVAVVVYDITNVNSFQQTTK	3	DSTVAVVVYDITNVNSFQQTTK3	15759	22136.8	20062.8
Q9EQH1	Q9EQH1	GAB2_RAT	Gab2	GRB2-associated-binding protein 2	1	DSTYDLPR	DSTYDLPR	2	DSTYDLPR2	17615.4	18560.9	11564.7
P01836	P01835;F1LTN6;P01836	KACA_RAT		Ig kappa chain C region, A allele	0	DSTYSMSSTLSLTK	DSTYSMSSTLSLTK	2	DSTYSMSSTLSLTK2	106178	102723	106692
P01836	P01835;F1LTN6;P01836	KACA_RAT		Ig kappa chain C region, A allele	0	DSTYSMSSTLSLTK	DSTYSMSSTLSLTK	3	DSTYSMSSTLSLTK3	161027	156610	161234
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	DSVDLSR	DSVDLSR	2	DSVDLSR2	58654.7	57080.6	57655.9
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	DSVEDDMLQLSEFHPLLR	DSVEDDMLQLSEFHPLLR	3	DSVEDDMLQLSEFHPLLR3		386545	
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	DSVINLSESVEDGPR	DSVINLSESVEDGPR	2	DSVINLSESVEDGPR2	5915.04	6873.56	6119.6
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	DSVLAASR	DSVLAASR	2	DSVLAASR2	30877.3	27185	36323.4
A0A0G2K8Z9	A0A8I5ZVW2;A0A0G2K9Y3;D3ZM20;O35787;A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	0	DSVLTWLLK	DSVLTWLLK	2	DSVLTWLLK2	14818	15693.9	13532.1
O88658	O88658;F1M4A4	KIF1B_RAT	Kif1b	Kinesin-like protein KIF1B	0	DSVLTWLLR	DSVLTWLLR	2	DSVLTWLLR2	3978.94	2497.65	3195.73
Q63448	Q63448	ACOX3_RAT	Acox3	Peroxisomal acyl-coenzyme A oxidase 3	1	DSVLWSDIPK	DSVLWSDIPK	2	DSVLWSDIPK2	24679.8	29981.1	21896.4
P35000	P35000	VIPR2_RAT	Vipr2	Vasoactive intestinal polypeptide receptor 2	1	DSVLYSSSGTLR	DSVLYSSSGTLR	2	DSVLYSSSGTLR2		5805.26	5225.38
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	DSVPERDGSR	DSVPERDGSR	2	DSVPERDGSR2			40237.2
Q5XXR3	Q5XXR3	ARHG6_RAT	Arhgef6	Rho guanine nucleotide exchange factor 6	1	DSVPQVLLPEEEK	DSVPQVLLPEEEK	2	DSVPQVLLPEEEK2	9231.38	15621.7	17265.1
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	DSVQALK	DSVQALK	1	DSVQALK1	60221.3	56558.5	63938.7
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	DSVQALK	DSVQALK	2	DSVQALK2	3.1482e+06	3.58734e+06	3.76609e+06
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	DSVQHPSGDK	DSVQHPSGDK	2	DSVQHPSGDK2			77171.5
Q99N37	Q99N37	RHG17_RAT	Arhgap17	Rho GTPase-activating protein 17	1	DSVSAAAPVAGR	DSVSAAAPVAGR	2	DSVSAAAPVAGR2	12065.4	19351.3	10327.3
I6L9G5	I6L9G5	RCN3_RAT	Rcn3	Reticulocalbin-3	1	DSVSAAWHTYDTDR	DSVSAAWHTYDTDR	3	DSVSAAWHTYDTDR3	11897	11459.1	13879.5
I6L9G5	I6L9G5	RCN3_RAT	Rcn3	Reticulocalbin-3	1	DSVSAAWHTYDTDRDGR	DSVSAAWHTYDTDRDGR	3	DSVSAAWHTYDTDRDGR3	88838.2	83600.2	78429.7
I6L9G5	I6L9G5	RCN3_RAT	Rcn3	Reticulocalbin-3	1	DSVSAAWHTYDTDRDGR	DSVSAAWHTYDTDRDGR	4	DSVSAAWHTYDTDRDGR4	28318.3	42617.7	24689.2
A0A0G2K8D1	A0A0G2K8D1	A0A0G2K8D1_RAT	Mospd2	Motile sperm domain containing 2	1	DSVSALSDK	DSVSALSDK	2	DSVSALSDK2	30317.1	32009.6	20250.9
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	DSVSLHK	DSVSLHK	2	DSVSLHK2	27669.8	25954.7	
F1LS35	F1LS35	F1LS35_RAT	Hps5	Hermansky-Pudlak syndrome 5 protein homolog	1	DSVSSFVR	DSVSSFVR	2	DSVSSFVR2	5822.42	8527.19	2391.43
Q6AYA5	Q6AYA5	T106B_RAT	Tmem106b	Transmembrane protein 106B	1	DSVTCPTCQGTGR	DSVTC(UniMod:4)PTC(UniMod:4)QGTGR	2	DSVTC(UniMod:4)PTC(UniMod:4)QGTGR2	27917.1	12076.7	19946.9
F1LVX1	F1LVX1	F1LVX1_RAT	Dnajc1	DnaJ heat shock protein family (Hsp40) member C1	1	DSVTSSPGMTR	DSVTSSPGMTR	2	DSVTSSPGMTR2	16817.3	21469.8	14834
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	DSVVAGFQWATK	DSVVAGFQWATK	2	DSVVAGFQWATK2	56474.3	57414.9	27228.8
A0A8I6GBD2	A0A8I6GBD2	A0A8I6GBD2_RAT	Actr10	Actin related protein 10	1	DSVVEILFEQDNEEK	DSVVEILFEQDNEEK	2	DSVVEILFEQDNEEK2	7022.81	3753.55	5618.01
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	DSVVIEGQDFVLR	DSVVIEGQDFVLR	2	DSVVIEGQDFVLR2	111076	120763	113459
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	DSVVIEGQDFVLR	DSVVIEGQDFVLR	3	DSVVIEGQDFVLR3	8934.85	5632.71	4594.62
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	DSVVLNLLK	DSVVLNLLK	2	DSVVLNLLK2	24038.5	27608.9	19794.4
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	DSVVQMK	DSVVQMK	2	DSVVQMK2	55716.1	69555.2	78811.9
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	DSVVTSSSSR	DSVVTSSSSR	2	DSVVTSSSSR2	106885	100753	110581
Q9JID1	Q9JID1	PDCD4_RAT	Pdcd4	Programmed cell death protein 4	1	DSVWGSGGGQQPVNHLVK	DSVWGSGGGQQPVNHLVK	3	DSVWGSGGGQQPVNHLVK3	12272.8		9895.6
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	DSWENIFELLFWGR	DSWENIFELLFWGR	2	DSWENIFELLFWGR2	6044.56		
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	DSWGEIQQR	DSWGEIQQR	2	DSWGEIQQR2	18854	20873	19889.3
A0A8I5ZRV3	A0A8I5ZRV3;A0A0G2JXJ3	A0A8I5ZRV3_RAT	Fam3a	FAM3 metabolism regulating signaling molecule A	0	DSWVFVGAK	DSWVFVGAK	2	DSWVFVGAK2	30616.7	31487.3	15835.3
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	DSWWSSGLQQELPAEQ	DSWWSSGLQQELPAEQ	2	DSWWSSGLQQELPAEQ2	22037.8	20868.6	15833
P60825	P60825	CIRBP_RAT	Cirbp	Cold-inducible RNA-binding protein	1	DSYDSYATHNE	DSYDSYATHNE	2	DSYDSYATHNE2	1186.04	2033.41	
Q68HB8	Q68HB8	Q68HB8_RAT	Pcdh7	Protocadherin 7	1	DSYELTLR	DSYELTLR	2	DSYELTLR2	8594.33	11019	12821.8
Q5BK48	Q5BK48	TTC5_RAT	Ttc5	Tetratricopeptide repeat protein 5	1	DSYFETHSVEDAGQK	DSYFETHSVEDAGQK	3	DSYFETHSVEDAGQK3		2115.64	6868.75
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	DSYIASQGPLLHTTEDFWR	DSYIASQGPLLHTTEDFWR	3	DSYIASQGPLLHTTEDFWR3	17414.7	21169.9	32946.7
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	DSYIEVLLPLGSDPDLR	DSYIEVLLPLGSDPDLR	2	DSYIEVLLPLGSDPDLR2		8033.42	9144.7
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	DSYIEVLLPLGSDPDLR	DSYIEVLLPLGSDPDLR	3	DSYIEVLLPLGSDPDLR3	2478.3		1046.89
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	DSYIEVLLPLGSDPDLRDK	DSYIEVLLPLGSDPDLRDK	3	DSYIEVLLPLGSDPDLRDK3	7874.9	7505.9	12231.6
A0A8I5ZWP3	A0A8I5ZWP3;Q9QYE7	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	0	DSYLGYSTAVAFWK	DSYLGYSTAVAFWK	2	DSYLGYSTAVAFWK2	23388.7	15272.8	16711.6
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	DSYLILETLPTEYDSR	DSYLILETLPTEYDSR	2	DSYLILETLPTEYDSR2	58429.7	47091.3	54319.8
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	DSYLILETLPTEYDSR	DSYLILETLPTEYDSR	3	DSYLILETLPTEYDSR3	7420.19	6921.9	16311.3
P49745	P49745	TPO_RAT	Thpo	Thrombopoietin	1	DSYLLHSR	DSYLLHSR	2	DSYLLHSR2	4322.32		1641.84
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	DSYLLTVTATDGTFSSK	DSYLLTVTATDGTFSSK	2	DSYLLTVTATDGTFSSK2	7122.87	6961.66	10563.8
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	DSYLVHLTCFSSK	DSYLVHLTC(UniMod:4)FSSK	3	DSYLVHLTC(UniMod:4)FSSK3	7601.28	14696.7	14781.9
P28064	P28064	PSB8_RAT	Psmb8	Proteasome subunit beta type-8	1	DSYSGGVVNMYHMK	DSYSGGVVNMYHMK	2	DSYSGGVVNMYHMK2	148522	129541	132639
P28064	P28064	PSB8_RAT	Psmb8	Proteasome subunit beta type-8	1	DSYSGGVVNMYHMK	DSYSGGVVNMYHMK	3	DSYSGGVVNMYHMK3	667392	754870	852379
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	DSYSGNCALYHR	DSYSGNC(UniMod:4)ALYHR	2	DSYSGNC(UniMod:4)ALYHR2	31944.8	39517.7	39173.6
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	DSYSGNCALYHR	DSYSGNC(UniMod:4)ALYHR	3	DSYSGNC(UniMod:4)ALYHR3	313128	312371	327840
P68136	P60711;P63259;A0A8I5Y704;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	DSYVGDEAQSK	DSYVGDEAQSK	2	DSYVGDEAQSK2	282360	261133	289605
P68136	P60711;P63259;A0A8I5Y704;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	DSYVGDEAQSKR	DSYVGDEAQSKR	2	DSYVGDEAQSKR2	314995	351805	324739
P68136	P60711;P63259;A0A8I5Y704;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	DSYVGDEAQSKR	DSYVGDEAQSKR	3	DSYVGDEAQSKR3	20754.9	2.24378e+06	2.5901e+06
A0A0G2QC33	A0A0G2QC33	ATG4B_RAT	Atg4b	Cysteine protease ATG4B	1	DSYYSIHQIAQMGVGEGK	DSYYSIHQIAQMGVGEGK	3	DSYYSIHQIAQMGVGEGK3	17788	18149	25785
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	DTAAELDKGPEPK	DTAAELDKGPEPK	3	DTAAELDKGPEPK3	15541.3	18388.9	11252.8
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	DTAALSPSK	DTAALSPSK	1	DTAALSPSK1	4551.52	2757.6	
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	DTAALSPSK	DTAALSPSK	2	DTAALSPSK2	96852.1	94765.3	115014
A0A8I5Y120	A0A8I5Y120	A0A8I5Y120_RAT	Brap	BRCA1 associated protein	1	DTAEEINNMK	DTAEEINNMK	2	DTAEEINNMK2	4151	5739.57	6125.16
A0A8I5ZNK2	A0A8I5ZNK2	A0A8I5ZNK2_RAT	Oxsr1	non-specific serine/threonine protein kinase	1	DTAEGVSQELISAGLVDGR	DTAEGVSQELISAGLVDGR	2	DTAEGVSQELISAGLVDGR2	4662.06	2425.92	6547.53
A0A8I5ZNK2	A0A8I5ZNK2	A0A8I5ZNK2_RAT	Oxsr1	non-specific serine/threonine protein kinase	1	DTAEGVSQELISAGLVDGR	DTAEGVSQELISAGLVDGR	3	DTAEGVSQELISAGLVDGR3	5235.51	9787.57	5820.23
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	DTAHNLPEFIVK	DTAHNLPEFIVK	3	DTAHNLPEFIVK3	2673.78	1506.33	5459.51
A0A8I6AT07	M0R4Q5;A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	0	DTAHSAALLAQLK	DTAHSAALLAQLK	3	DTAHSAALLAQLK3	3230.88	1435.13	2850.64
A0A8I6AAR9	A0A0G2K916;A0A8I6AAR9	A0A8I6AAR9_RAT	Ankrd17	Ankyrin repeat domain 17	0	DTALTIAADK	DTALTIAADK	2	DTALTIAADK2	5687.13	6213.77	
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	DTANLFPHK	DTANLFPHK	2	DTANLFPHK2	158631	88396.3	100131
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	DTANLTK	DTANLTK	2	DTANLTK2		47264.8	
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	DTANWLEINPETGVISTR	DTANWLEINPETGVISTR	3	DTANWLEINPETGVISTR3	234531	198215	260598
Q5BJM5	Q5BJM5	PKHO1_RAT	Plekho1	Pleckstrin homology domain-containing family O member 1	1	DTAPAHPLHLQAEESPAPVPSQPGQLSR	DTAPAHPLHLQAEESPAPVPSQPGQLSR	3	DTAPAHPLHLQAEESPAPVPSQPGQLSR3	1746.2	4783.71	
Q5BJM5	Q5BJM5	PKHO1_RAT	Plekho1	Pleckstrin homology domain-containing family O member 1	1	DTAPAHPLHLQAEESPAPVPSQPGQLSR	DTAPAHPLHLQAEESPAPVPSQPGQLSR	4	DTAPAHPLHLQAEESPAPVPSQPGQLSR4	19544.2	31147.3	27599.7
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	DTAPVLEGLK	DTAPVLEGLK	2	DTAPVLEGLK2	121081	108304	105593
Q03555	Q03555	GEPH_RAT	Gphn	Gephyrin	1	DTASLSTTPSESPR	DTASLSTTPSESPR	2	DTASLSTTPSESPR2	2726.75	5676.83	2236.96
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	DTATEIAINVK	DTATEIAINVK	2	DTATEIAINVK2	51300.2	65159.7	57417.8
Q641Z8	Q641Z8	PEF1_RAT	Pef1	Peflin	1	DTAVQGNIR	DTAVQGNIR	2	DTAVQGNIR2	20354.1	16022.7	20971.3
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	DTCIVISGESGAGK	DTC(UniMod:4)IVISGESGAGK	2	DTC(UniMod:4)IVISGESGAGK2	7652.63	8730.3	6023.4
P32038	P32038	CFAD_RAT	Cfd	Complement factor D	1	DTCRGDSGGPLVCGDAVEAVVTWGSR	DTC(UniMod:4)RGDSGGPLVC(UniMod:4)GDAVEAVVTWGSR	3	DTC(UniMod:4)RGDSGGPLVC(UniMod:4)GDAVEAVVTWGSR3	15602.3	14496.7	13977.2
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	DTCSTAYR	DTC(UniMod:4)STAYR	2	DTC(UniMod:4)STAYR2	13125.6	17867.1	
Q62636	Q62636	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	1	DTDDVPMILVGNK	DTDDVPMILVGNK	2	DTDDVPMILVGNK2	2.45892e+06	2.33095e+06	2.6112e+06
Q62636	Q62636	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	1	DTDDVPMILVGNK	DTDDVPMILVGNK	3	DTDDVPMILVGNK3	26592.5	22649.4	32270.6
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	DTDFMSLQEELK	DTDFMSLQEELK	2	DTDFMSLQEELK2	26623	15971.8	12010
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	DTDFMSLQEELKK	DTDFMSLQEELKK	2	DTDFMSLQEELKK2	11879.9	10594.1	7652.94
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	DTDFMSLQEELKK	DTDFMSLQEELKK	3	DTDFMSLQEELKK3	59834.1	45059.4	55142
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	DTDGGNTSFVR	DTDGGNTSFVR	2	DTDGGNTSFVR2	11471.3	8268.66	5926.08
Q9R0K8	Q9R0K8	STC2_RAT	Stc2	Stanniocalcin-2	1	DTDHHLTANR	DTDHHLTANR	2	DTDHHLTANR2			14329
Q9R0K8	Q9R0K8	STC2_RAT	Stc2	Stanniocalcin-2	1	DTDHHLTANR	DTDHHLTANR	3	DTDHHLTANR3			18286
B2GV73	B2GV73	B2GV73_RAT	Arpc3	Actin-related protein 2/3 complex subunit 3	1	DTDIVDEAIYYFK	DTDIVDEAIYYFK	2	DTDIVDEAIYYFK2	34998.1	41251.8	32656.3
B2GV73	B2GV73	B2GV73_RAT	Arpc3	Actin-related protein 2/3 complex subunit 3	1	DTDIVDEAIYYFK	DTDIVDEAIYYFK	3	DTDIVDEAIYYFK3	24435.3	20216.4	21080.7
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	DTDLDGFPDEK	DTDLDGFPDEK	2	DTDLDGFPDEK2	704916	737060	683553
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	DTDLGSSSK	DTDLGSSSK	1	DTDLGSSSK1	5363.27		3856.88
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	DTDLGSSSK	DTDLGSSSK	2	DTDLGSSSK2	117276		102028
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	DTDLQQTQATEPR	DTDLQQTQATEPR	2	DTDLQQTQATEPR2	13308	11068.8	15668.4
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	DTDMDGVGDQCDNCPLEHNPDQLDSDSDR	DTDMDGVGDQC(UniMod:4)DNC(UniMod:4)PLEHNPDQLDSDSDR	4	DTDMDGVGDQC(UniMod:4)DNC(UniMod:4)PLEHNPDQLDSDSDR4	28176	24541.6	41866.9
B3GNI6	A0A8I6AA08;B3GNI6	SEP11_RAT	Septin11	Septin-11	0	DTDPDSKPFSLQETYEAK	DTDPDSKPFSLQETYEAK	3	DTDPDSKPFSLQETYEAK3	48863.6	60024.3	25408.6
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	DTDRDGQGDACDDDIDGDR	DTDRDGQGDAC(UniMod:4)DDDIDGDR	3	DTDRDGQGDAC(UniMod:4)DDDIDGDR3	358739	341230	388955
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	DTDRDGQGDACDDDIDGDRIR	DTDRDGQGDAC(UniMod:4)DDDIDGDRIR	3	DTDRDGQGDAC(UniMod:4)DDDIDGDRIR3	43779.6	58359.6	38404.8
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	DTDRDGQGDACDDDIDGDRIR	DTDRDGQGDAC(UniMod:4)DDDIDGDRIR	4	DTDRDGQGDAC(UniMod:4)DDDIDGDRIR4	413648	478474	532555
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	DTDSAITNCALSYK	DTDSAITNC(UniMod:4)ALSYK	2	DTDSAITNC(UniMod:4)ALSYK2	43324.6	37305.5	31124.2
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	DTDSDTQDANDSSCK	DTDSDTQDANDSSC(UniMod:4)K	2	DTDSDTQDANDSSC(UniMod:4)K2			2419.81
P0DP29;P0DP30;P0DP31	P0DP30;Q5U206;P0DP29;P0DP31	CALM1_RAT;CALM2_RAT;CALM3_RAT	Calm1;Calm2;Calm3	Calmodulin-1	0	DTDSEEEIR	DTDSEEEIR	2	DTDSEEEIR2	4.6822e+06	5.56681e+06	5.39565e+06
P0DP29;P0DP30;P0DP31	P0DP30;Q5U206;P0DP29;P0DP31	CALM1_RAT;CALM2_RAT;CALM3_RAT	Calm1;Calm2;Calm3	Calmodulin-1	0	DTDSEEEIREAFR	DTDSEEEIREAFR	2	DTDSEEEIREAFR2	34595.9	39859.5	36106.6
P0DP29;P0DP30;P0DP31	P0DP30;Q5U206;P0DP29;P0DP31	CALM1_RAT;CALM2_RAT;CALM3_RAT	Calm1;Calm2;Calm3	Calmodulin-1	0	DTDSEEEIREAFR	DTDSEEEIREAFR	3	DTDSEEEIREAFR3	5.01657e+06	7.06471e+06	6.4723e+06
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	DTDSINLYK	DTDSINLYK	2	DTDSINLYK2	28381.3	26993.1	38057.7
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	DTDSLQSQIEDIR	DTDSLQSQIEDIR	2	DTDSLQSQIEDIR2	26990.7	31793.6	24903.7
A0A8J8XL70	A0A8J8XL70	A0A8J8XL70_RAT	Serpinf1	Serpin family F member 1	1	DTDTGALLFIGR	DTDTGALLFIGR	2	DTDTGALLFIGR2	31636.9	30278.2	28360.1
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	DTDVHTVASLLK	DTDVHTVASLLK	3	DTDVHTVASLLK3	6781.88	9399.77	
O08775	O08775	VGFR2_RAT	Kdr	Vascular endothelial growth factor receptor 2	1	DTDVSSIVYVYVQDHR	DTDVSSIVYVYVQDHR	3	DTDVSSIVYVYVQDHR3	9544.48	8779.79	11204.1
A0A8I5ZVY2	A0A8I5ZVY2	A0A8I5ZVY2_RAT	Mrps6	Mitochondrial ribosomal protein S6	1	DTDVVRPNIVK	DTDVVRPNIVK	3	DTDVVRPNIVK3	15680.8	10274.5	5837.33
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	DTEAMKR	DTEAMKR	2	DTEAMKR2			43031.4
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	DTEAVMAFLEAK	DTEAVMAFLEAK	2	DTEAVMAFLEAK2	48816	11485.1	58867.8
P62836	P62836	RAP1A_RAT	Rap1a	Ras-related protein Rap-1A	1	DTEDVPMILVGNK	DTEDVPMILVGNK	2	DTEDVPMILVGNK2	154555	152809	165029
P62836	P62836	RAP1A_RAT	Rap1a	Ras-related protein Rap-1A	1	DTEDVPMILVGNK	DTEDVPMILVGNK	3	DTEDVPMILVGNK3	12019.8	13077	11046.7
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	DTEEDSVTATLAAAQK	DTEEDSVTATLAAAQK	2	DTEEDSVTATLAAAQK2	905.291	1218.18	1328.17
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	DTEELRSEK	DTEELRSEK	2	DTEELRSEK2			20644.9
Q03626	Q6IE52;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	DTEELTYSVPYGR	DTEELTYSVPYGR	2	DTEELTYSVPYGR2	5.47525e+06	3.86552e+06	3.70202e+06
Q03626	Q6IE52;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	DTEELTYSVPYGR	DTEELTYSVPYGR	3	DTEELTYSVPYGR3	721802	614173	488843
A0A8I5ZP83	D4A9Z8;A0A8I5ZP83	A0A8I5ZP83_RAT	Chmp4b	Charged multivesicular body protein 4B	0	DTEEMLSK	DTEEMLSK	2	DTEEMLSK2	25546.3	19564.5	18329.9
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	DTEETPESAEAK	DTEETPESAEAK	2	DTEETPESAEAK2	159944	179773	137549
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	DTEFILFKPVR	DTEFILFKPVR	2	DTEFILFKPVR2	4513.8	2117.09	2819.23
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	DTEFILFKPVR	DTEFILFKPVR	3	DTEFILFKPVR3	16451.7	16283.1	24570.4
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	DTEHSGLVQTLQR	DTEHSGLVQTLQR	3	DTEHSGLVQTLQR3	11661.4	13031.7	10985.8
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	DTEIQLLK	DTEIQLLK	2	DTEIQLLK2	9115.35	8628.35	9951.39
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	DTEISSTR	DTEISSTR	2	DTEISSTR2		295268	
Q9Z254	Q9Z254	GIPC1_RAT	Gipc1	PDZ domain-containing protein GIPC1	1	DTELAATMVELGK	DTELAATMVELGK	2	DTELAATMVELGK2	10395	3539.77	4642.29
Q9Z254	Q9Z254	GIPC1_RAT	Gipc1	PDZ domain-containing protein GIPC1	1	DTELAATMVELGKDK	DTELAATMVELGKDK	2	DTELAATMVELGKDK2	3325.41	3884.72	2444.26
Q9Z254	Q9Z254	GIPC1_RAT	Gipc1	PDZ domain-containing protein GIPC1	1	DTELAATMVELGKDK	DTELAATMVELGKDK	3	DTELAATMVELGKDK3	38177.7	36524.5	26404.6
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	DTELAEELLQWFLQEEK	DTELAEELLQWFLQEEK	3	DTELAEELLQWFLQEEK3	5352.17		
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	DTELAEELLQWFLQEEKR	DTELAEELLQWFLQEEKR	3	DTELAEELLQWFLQEEKR3	3525.04	5221.49	
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	DTELEEATEK	DTELEEATEK	2	DTELEEATEK2	12441.5	4827.76	13330.4
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	DTELLDLR	DTELLDLR	2	DTELLDLR2	6391.98	7562.57	8804.64
D4A731	D4A731	D4A731_RAT	Ankib1	RBR-type E3 ubiquitin transferase	1	DTELVPPEDSVSK	DTELVPPEDSVSK	3	DTELVPPEDSVSK3		5524.67	
Q5XI86	Q5XI86	Q5XI86_RAT	Ptrh2	aminoacyl-tRNA hydrolase	1	DTEMGTEASILGESGEYK	DTEMGTEASILGESGEYK	2	DTEMGTEASILGESGEYK2		2141.74	
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	DTEMVER	DTEMVER	2	DTEMVER2	23795.2	25151.9	23544.3
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	DTENAIENMIGPDWK	DTENAIENMIGPDWK	2	DTENAIENMIGPDWK2	73915.7	70679.6	61130.6
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	DTENAIENMIGPDWK	DTENAIENMIGPDWK	3	DTENAIENMIGPDWK3	8139.5	8213.38	9004.18
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	DTENIYGATLLLR	DTENIYGATLLLR	2	DTENIYGATLLLR2	20117	23038	13980.8
Q923U9	Q923U9	S40A1_RAT	Slc40a1	Solute carrier family 40 member 1	1	DTEPKPLEGTHLMGEK	DTEPKPLEGTHLMGEK	3	DTEPKPLEGTHLMGEK3	45608.9	48334.9	34568.2
Q923U9	Q923U9	S40A1_RAT	Slc40a1	Solute carrier family 40 member 1	1	DTEPKPLEGTHLMGEK	DTEPKPLEGTHLMGEK	4	DTEPKPLEGTHLMGEK4	16292.6	26078	23997.2
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	DTEQHGGLIPVHSLNLLLK	DTEQHGGLIPVHSLNLLLK	3	DTEQHGGLIPVHSLNLLLK3	18194.7	17846.3	13374.3
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	DTEQHGGLIPVHSLNLLLK	DTEQHGGLIPVHSLNLLLK	4	DTEQHGGLIPVHSLNLLLK4	19318.7	13383.4	18348
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	DTEQTEPEQR	DTEQTEPEQR	2	DTEQTEPEQR2			3868.28
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	DTEQTEPEQREPTPYPDER	DTEQTEPEQREPTPYPDER	3	DTEQTEPEQREPTPYPDER3	9795.29	9233.03	7732.53
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DTEQVDNWMSK	DTEQVDNWMSK	2	DTEQVDNWMSK2	319743	301274	339791
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	DTESQLSELR	DTESQLSELR	2	DTESQLSELR2	10427.7	4530.33	13960.4
P04466	P04466	MYL11_RAT	Myl11	Myosin regulatory light chain 11	1	DTFAAMGR	DTFAAMGR	2	DTFAAMGR2	8053.59	3988.24	5690.29
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	DTFFQNPQYIFEVK	DTFFQNPQYIFEVK	2	DTFFQNPQYIFEVK2	73028.3	75172.1	81769.4
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	DTFFQNPQYIFEVK	DTFFQNPQYIFEVK	3	DTFFQNPQYIFEVK3	16551	18235	24058.5
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	DTFIALR	DTFIALR	2	DTFIALR2	3681.56	5347.41	4219.34
P05712	P05712	RAB2A_RAT	Rab2a	Ras-related protein Rab-2A	1	DTFNHLTTWLEDAR	DTFNHLTTWLEDAR	2	DTFNHLTTWLEDAR2	18507.3	13503.6	35675.8
P05712	P05712	RAB2A_RAT	Rab2a	Ras-related protein Rab-2A	1	DTFNHLTTWLEDAR	DTFNHLTTWLEDAR	3	DTFNHLTTWLEDAR3	31606.3	10176.2	42827.2
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	DTFQSEFYSGK	DTFQSEFYSGK	2	DTFQSEFYSGK2	940417	912522	947183
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	DTFQSEFYSGKR	DTFQSEFYSGKR	3	DTFQSEFYSGKR3		2742.1	3975.58
D3ZRJ7	D3ZRJ7	D3ZRJ7_RAT	Lrrk1	non-specific serine/threonine protein kinase	1	DTFSVQPSVPESPIR	DTFSVQPSVPESPIR	2	DTFSVQPSVPESPIR2	5017.15	3964.94	4579.53
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	DTFTVEAHSNETIGSVR	DTFTVEAHSNETIGSVR	3	DTFTVEAHSNETIGSVR3	4841.82	8181.48	
Q66HG5	Q66HG5	TM9S2_RAT	Tm9sf2	Transmembrane 9 superfamily member 2	1	DTFYIFNHVDIK	DTFYIFNHVDIK	2	DTFYIFNHVDIK2	6821.12	6403.62	5003.74
Q66HG5	Q66HG5	TM9S2_RAT	Tm9sf2	Transmembrane 9 superfamily member 2	1	DTFYIFNHVDIK	DTFYIFNHVDIK	3	DTFYIFNHVDIK3	13502.1	19399.6	12359.8
F1LYX9	F1LYX9	F1LYX9_RAT	Dsg2	Desmoglein 2	1	DTGEIYTTSFALDREEHSSYSLTVEAR	DTGEIYTTSFALDREEHSSYSLTVEAR	4	DTGEIYTTSFALDREEHSSYSLTVEAR4	5052.9	5052.75	6517.61
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	DTGGDGQDSLYK	DTGGDGQDSLYK	2	DTGGDGQDSLYK2	55086.3	67518.6	61823.7
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	DTGGDGQESLYK	DTGGDGQESLYK	2	DTGGDGQESLYK2	12618.3	15049.9	9321.38
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	DTGGLVPGK	DTGGLVPGK	2	DTGGLVPGK2	33116.7	44522.8	26643.1
P02688	P02688	MBP_RAT	Mbp	Myelin basic protein	1	DTGILDSIGR	DTGILDSIGR	2	DTGILDSIGR2	25515.1	17949.7	23761.1
P80386	P80386	AAKB1_RAT	Prkab1	5'-AMP-activated protein kinase subunit beta-1	1	DTGISCDPALLPEPNHVMLNHLYALSIK	DTGISC(UniMod:4)DPALLPEPNHVMLNHLYALSIK	4	DTGISC(UniMod:4)DPALLPEPNHVMLNHLYALSIK4	5453.77	7460.43	
P60868	D3ZZK1;A0A0G2K6L6;P60868	RS20_RAT	Rps20	Small ribosomal subunit protein uS10	0	DTGKTPVEPEVAIHR	DTGKTPVEPEVAIHR	3	DTGKTPVEPEVAIHR3	4414.63		
P60868	D3ZZK1;A0A0G2K6L6;P60868	RS20_RAT	Rps20	Small ribosomal subunit protein uS10	0	DTGKTPVEPEVAIHR	DTGKTPVEPEVAIHR	4	DTGKTPVEPEVAIHR4	9742.03	8044.93	11407
D3ZJR7	D3ZJR7	D3ZJR7_RAT	Dsc2	Desmocollin 2	1	DTGNLYCTDR	DTGNLYC(UniMod:4)TDR	2	DTGNLYC(UniMod:4)TDR2	20196.9	17806	15397
A0A8I5ZVI9	A0A8I5ZVI9	A0A8I5ZVI9_RAT	Ranbp3	RAN binding protein 3	1	DTGQLYAALHHR	DTGQLYAALHHR	3	DTGQLYAALHHR3	40361.8	46202.8	29779.1
F1M3G7	F1M3G7	AKP13_RAT	Akap13	A-kinase anchor protein 13	1	DTGRPGEGVEPASAVDSR	DTGRPGEGVEPASAVDSR	3	DTGRPGEGVEPASAVDSR3	2945.67	3323.61	1105.42
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	DTGSVTCK	DTGSVTC(UniMod:4)K	1	DTGSVTC(UniMod:4)K1			2645.35
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	DTGSVTCK	DTGSVTC(UniMod:4)K	2	DTGSVTC(UniMod:4)K2			17274.3
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	DTGVISVVTSGLDR	DTGVISVVTSGLDR	2	DTGVISVVTSGLDR2	990486	961063	970926
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	DTGVISVVTSGLDR	DTGVISVVTSGLDR	3	DTGVISVVTSGLDR3	44565.2	43990.7	53540.3
P30427	P30427	PLEC_RAT	Plec	Plectin	1	DTHDQLSEPSEVR	DTHDQLSEPSEVR	3	DTHDQLSEPSEVR3	11219.9	6883	4986.03
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	DTHLQEADLQVEQNR	DTHLQEADLQVEQNR	3	DTHLQEADLQVEQNR3	29652.7	40529.7	35919.2
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	DTHSDEKPAPEESETR	DTHSDEKPAPEESETR	2	DTHSDEKPAPEESETR2			2916.84
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	DTHSDEKPAPEESETR	DTHSDEKPAPEESETR	3	DTHSDEKPAPEESETR3			21776.2
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	DTHSDEKPAPEESETR	DTHSDEKPAPEESETR	4	DTHSDEKPAPEESETR4			22390.7
A0A0G2KAU4	A0A0G2KAU4	A0A0G2KAU4_RAT	Rasgrp3	RAS guanyl releasing protein 3	1	DTHSHLSSEVTK	DTHSHLSSEVTK	2	DTHSHLSSEVTK2		3421.94	
A0A0G2KAU4	A0A0G2KAU4	A0A0G2KAU4_RAT	Rasgrp3	RAS guanyl releasing protein 3	1	DTHSHLSSEVTK	DTHSHLSSEVTK	3	DTHSHLSSEVTK3	3516.55	11046.7	7902.72
Q641Y0	Q641Y0	OST48_RAT	Ddost	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit	1	DTHSLFFR	DTHSLFFR	2	DTHSLFFR2	70585.1	69308.4	67390.7
D3ZNU3	D3ZNU3	D3ZNU3_RAT	Cramp1	Cramped chromatin regulator homolog 1	1	DTHSLPPAQILGIQSGQGIAR	DTHSLPPAQILGIQSGQGIAR	3	DTHSLPPAQILGIQSGQGIAR3	1874.2		
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	DTHVAPR	DTHVAPR	2	DTHVAPR2			28997.1
Q63798	Q63798	PSME2_RAT	Psme2	Proteasome activator complex subunit 2	1	DTHVMDYR	DTHVMDYR	2	DTHVMDYR2	16418.8	26806.2	18006.6
B2RYW9	B2RYW9	FAHD2_RAT	Fahd2	Fumarylacetoacetate hydrolase domain-containing protein 2	1	DTIADPHNLK	DTIADPHNLK	2	DTIADPHNLK2	12438	10929	10503.4
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	DTIALLCKPEPELNAAIPSANPAK	DTIALLC(UniMod:4)KPEPELNAAIPSANPAK	3	DTIALLC(UniMod:4)KPEPELNAAIPSANPAK3	60344.8	66327.4	64385.5
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	DTICELCGESHPYPVTYHMR	DTIC(UniMod:4)ELC(UniMod:4)GESHPYPVTYHMR	4	DTIC(UniMod:4)ELC(UniMod:4)GESHPYPVTYHMR4	2328.53	4568.61	4147.75
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	DTICNQDER	DTIC(UniMod:4)NQDER	2	DTIC(UniMod:4)NQDER2	56365.6	63568.6	60030
P31211	P31211	CBG_RAT	Serpina6	Corticosteroid-binding globulin	1	DTIDRWGK	DTIDRWGK	2	DTIDRWGK2	8029.16	5997.99	2971.05
D4A2N2	D4A2N2	D4A2N2_RAT	Inpp5b	phosphoinositide 5-phosphatase	1	DTIEDILVLHLHR	DTIEDILVLHLHR	3	DTIEDILVLHLHR3	28290	14988.1	19416.4
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	DTIEVSK	DTIEVSK	1	DTIEVSK1	7389.7	3521.34	3968.63
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	DTIEVSK	DTIEVSK	2	DTIEVSK2	163313	163098	172031
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	DTIGVSEETLK	DTIGVSEETLK	2	DTIGVSEETLK2	10117.4		9907.21
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	DTILHDNLK	DTILHDNLK	2	DTILHDNLK2	24042.4	19952.4	12576.4
P82471	Q9JID2;P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	0	DTILQLNLK	DTILQLNLK	2	DTILQLNLK2	109246	92262	81231.2
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	DTINPLYDETFR	DTINPLYDETFR	2	DTINPLYDETFR2	33150.8	35894.7	38195
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	DTIQLVIAR	DTIQLVIAR	2	DTIQLVIAR2	14753	9851.16	10117.7
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	DTIQQVAQR	DTIQQVAQR	2	DTIQQVAQR2	201505	154560	194960
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	DTLANCTK	DTLANC(UniMod:4)TK	2	DTLANC(UniMod:4)TK2		208987	
P43253	P43253	PI2R_RAT	Ptgir	Prostacyclin receptor	1	DTLAPDSLQAK	DTLAPDSLQAK	2	DTLAPDSLQAK2	392943	463008	433680
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	DTLESEMR	DTLESEMR	2	DTLESEMR2	26596.3	20220.4	29076.8
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	DTLFTADSGTR	DTLFTADSGTR	2	DTLFTADSGTR2	36108	38493.1	35892.1
Q5RK09	Q5RK09	EIF3G_RAT	Eif3g	Eukaryotic translation initiation factor 3 subunit G	1	DTLGPMQK	DTLGPMQK	2	DTLGPMQK2	129577	119456	114328
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	DTLGQTQQK	DTLGQTQQK	2	DTLGQTQQK2	52919	70999	63758.6
D4AA31	D4AA31	D4AA31_RAT	Prcp	Prolylcarboxypeptidase	1	DTLHLCSPLTSEK	DTLHLC(UniMod:4)SPLTSEK	2	DTLHLC(UniMod:4)SPLTSEK2	4600.58	1926.23	4857.25
D4AA31	D4AA31	D4AA31_RAT	Prcp	Prolylcarboxypeptidase	1	DTLHLCSPLTSEK	DTLHLC(UniMod:4)SPLTSEK	3	DTLHLC(UniMod:4)SPLTSEK3	49403.9	42167.1	59885.9
P05545	A0A0G2JSK1;P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	0	DTLPHEDQGK	DTLPHEDQGK	2	DTLPHEDQGK2		1.3105e+06	2061.88
P05545	A0A0G2JSK1;P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	0	DTLPHEDQGK	DTLPHEDQGK	3	DTLPHEDQGK3	22607.2	30488.6	12260
P05545	A0A0G2JSK1;P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	0	DTLPHEDQGKGR	DTLPHEDQGKGR	2	DTLPHEDQGKGR2			6245.03
P05545	A0A0G2JSK1;P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	0	DTLPHEDQGKGR	DTLPHEDQGKGR	3	DTLPHEDQGKGR3	116074		154032
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	DTLPYEELQGLK	DTLPYEELQGLK	2	DTLPYEELQGLK2	77202.1	78737.4	82181.4
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	DTLQCIAEMLQITK	DTLQC(UniMod:4)IAEMLQITK	2	DTLQC(UniMod:4)IAEMLQITK2		3422.32	2008.37
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	DTLQSELVGQLYK	DTLQSELVGQLYK	2	DTLQSELVGQLYK2	52091.6	71770	56263.3
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	DTLQSELVGQLYK	DTLQSELVGQLYK	3	DTLQSELVGQLYK3	11595.5	9188	18719.1
P05544	P05544	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	1	DTLSHEDHGK	DTLSHEDHGK	2	DTLSHEDHGK2			78712
D4A0J7	D4A0J7	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	1	DTLSTITGPTTQNTYGR	DTLSTITGPTTQNTYGR	2	DTLSTITGPTTQNTYGR2	35940.7	30114.9	29265
Q6AYK6	Q6AYK6	CYBP_RAT	Cacybp	Calcyclin-binding protein	1	DTLTNEK	DTLTNEK	2	DTLTNEK2	89539.4	101191	98258
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	DTLTSRPAQGVVTTLENVSPPR	DTLTSRPAQGVVTTLENVSPPR	3	DTLTSRPAQGVVTTLENVSPPR3	36044.3	33182.1	39561.8
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	DTLTSRPAQGVVTTLENVSPPR	DTLTSRPAQGVVTTLENVSPPR	4	DTLTSRPAQGVVTTLENVSPPR4	2.20109e+06	2.89565e+06	2.75446e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	DTLTSRPAQGVVTTLENVSPPRR	DTLTSRPAQGVVTTLENVSPPRR	3	DTLTSRPAQGVVTTLENVSPPRR3	161096	184859	165303
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	DTLTSRPAQGVVTTLENVSPPRR	DTLTSRPAQGVVTTLENVSPPRR	4	DTLTSRPAQGVVTTLENVSPPRR4	4.96424e+06	7.96094e+06	7.18084e+06
Q9WTT7	Q9WTT7	5MP1_RAT	Bzw2	eIF5-mimic protein 1	1	DTLVQGLNEAGDDLEAVAK	DTLVQGLNEAGDDLEAVAK	2	DTLVQGLNEAGDDLEAVAK2	19627.2	25802.5	24372.1
Q9WTT7	Q9WTT7	5MP1_RAT	Bzw2	eIF5-mimic protein 1	1	DTLVQGLNEAGDDLEAVAK	DTLVQGLNEAGDDLEAVAK	3	DTLVQGLNEAGDDLEAVAK3	17271.4	19323	27447.6
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	DTLVSYMETK	DTLVSYMETK	2	DTLVSYMETK2	4361.7	4574.29	3524.09
P62907	F1LYQ7;A0A8I5ZRG4;A0A8I5Y9H0;P62907;A0A8I5ZVS9	RL10A_RAT	Rpl10a	Large ribosomal subunit protein uL1	0	DTLYEAVR	DTLYEAVR	2	DTLYEAVR2	75244	74860.6	76064.5
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	DTMSSVEPDISSAK	DTMSSVEPDISSAK	2	DTMSSVEPDISSAK2	26921.7	35163.8	31732.5
Q9Z136	Q9Z136	TSC1_RAT	Tsc1	Hamartin	1	DTMVTQLHSQIR	DTMVTQLHSQIR	3	DTMVTQLHSQIR3	11027.6	11940	6128.74
Q99MH3	Q99MH3	HEPC_RAT	Hamp	Hepcidin	1	DTNFPICLFCCK	DTNFPIC(UniMod:4)LFC(UniMod:4)C(UniMod:4)K	2	DTNFPIC(UniMod:4)LFC(UniMod:4)C(UniMod:4)K2	50998.9	76023.8	43468.6
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	DTNGENIAESLVAEGLASR	DTNGENIAESLVAEGLASR	2	DTNGENIAESLVAEGLASR2	24921	24100	10577.4
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	DTNGENIAESLVAEGLASR	DTNGENIAESLVAEGLASR	3	DTNGENIAESLVAEGLASR3	24638	28115.9	40704
P24368	P24368	PPIB_RAT	Ppib	Peptidyl-prolyl cis-trans isomerase B	1	DTNGSQFFITTVK	DTNGSQFFITTVK	2	DTNGSQFFITTVK2	43267.2	47580.6	39712.5
P24368	P24368	PPIB_RAT	Ppib	Peptidyl-prolyl cis-trans isomerase B	1	DTNGSQFFITTVK	DTNGSQFFITTVK	3	DTNGSQFFITTVK3	721.214	5787.58	4678.07
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	DTNHGPQNHEAHLR	DTNHGPQNHEAHLR	4	DTNHGPQNHEAHLR4			4365.62
F1MAH6	F1MAH6	F1MAH6_RAT	Cdh11	Cadherin 11	1	DTNRPLEPPSEFIVK	DTNRPLEPPSEFIVK	3	DTNRPLEPPSEFIVK3	24773	20300	17085
A0A0G2K516	A0A0G2K516	A0A0G2K516_RAT	Stx11	Syntaxin 11	1	DTNSIAK	DTNSIAK	1	DTNSIAK1	3234.58		1291.33
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	DTNVMLVALAAK	DTNVMLVALAAK	2	DTNVMLVALAAK2	51553.8	58174.8	39582.4
P18266	P18266	GSK3B_RAT	Gsk3b	Glycogen synthase kinase-3 beta	1	DTPALFNFTTQELSSNPPLATILIPPHAR	DTPALFNFTTQELSSNPPLATILIPPHAR	4	DTPALFNFTTQELSSNPPLATILIPPHAR4	6523.14	10474.2	10596.5
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	DTPAQAPLAK	DTPAQAPLAK	2	DTPAQAPLAK2	14798.5	4432.35	9747.05
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	DTPDEPWAFPAR	DTPDEPWAFPAR	2	DTPDEPWAFPAR2	140473	90498.4	93832.5
P19234	P19234	NDUV2_RAT	Ndufv2	NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial	1	DTPENNPDTPFDFTPENYER	DTPENNPDTPFDFTPENYER	3	DTPENNPDTPFDFTPENYER3	19848.6	20770	23536.4
Q9WVK7	Q9WVK7	HCDH_RAT	Hadh	Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial	1	DTPGFIVNR	DTPGFIVNR	2	DTPGFIVNR2	71654.5	66928.5	60598.9
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	DTPLNIFVK	DTPLNIFVK	2	DTPLNIFVK2	33845.6	50773.9	40552.7
D3ZMV1	D3ZMV1	D3ZMV1_RAT	Sla2	Src-like-adaptor 2	1	DTPLPVTVPTSSLNWK	DTPLPVTVPTSSLNWK	2	DTPLPVTVPTSSLNWK2	26512.4	23953.8	31212.8
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	DTPQELEQTR	DTPQELEQTR	2	DTPQELEQTR2	83616.7	100352	67019.7
A0A8I6A1Z5	A0A8I6A1Z5	A0A8I6A1Z5_RAT	Tmx1	Thioredoxin-related transmembrane protein 1	1	DTPQSGLR	DTPQSGLR	2	DTPQSGLR2	834087	1.05456e+06	1.13834e+06
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	DTPTQEDWLVSVLPEGSR	DTPTQEDWLVSVLPEGSR	3	DTPTQEDWLVSVLPEGSR3	25121	25424.3	27439.6
Q7TP40	Q7TP40	PCNP_RAT	Pcnp	PEST proteolytic signal-containing nuclear protein	1	DTPTSAGPNSFNK	DTPTSAGPNSFNK	2	DTPTSAGPNSFNK2	4064.39		5579.46
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	DTPVLSELPEPVVAR	DTPVLSELPEPVVAR	2	DTPVLSELPEPVVAR2	14289.8	11605.9	11848
Q4QQS6	Q4QQS6	Q4QQS6_RAT	Alg5	dolichyl-phosphate beta-glucosyltransferase	1	DTQCGFK	DTQC(UniMod:4)GFK	2	DTQC(UniMod:4)GFK2	10261	6519.03	10051.6
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	DTQEIVHDLESPGIDPSIIK	DTQEIVHDLESPGIDPSIIK	3	DTQEIVHDLESPGIDPSIIK3	20891.9	26920.3	21909.7
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	DTQEQLSK	DTQEQLSK	2	DTQEQLSK2	69384.5	61261.8	67785.1
D3ZIY3	F7F2Q6;A0A8I6ABJ9;D3ZIY3	D3ZIY3_RAT	Ythdf3	YTH domain-containing family protein	0	DTQEVPLEK	DTQEVPLEK	2	DTQEVPLEK2	4106.27	1385.3	
B0BN70	B0BN70	SMIM7_RAT	Smim7	Small integral membrane protein 7	1	DTQGFGEESREPSTGDNIR	DTQGFGEESREPSTGDNIR	3	DTQGFGEESREPSTGDNIR3	3554.01		
Q5XIF3	Q5XIF3	NDUS4_RAT	Ndufs4	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial	1	DTQLITVDEK	DTQLITVDEK	2	DTQLITVDEK2	76544.6	90120.9	110020
P63100	P63100	CANB1_RAT	Ppp3r1	Calcineurin subunit B type 1	1	DTQLQQIVDK	DTQLQQIVDK	2	DTQLQQIVDK2	21503.4	93327.5	76280.1
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	DTQSSVLFDITGQVR	DTQSSVLFDITGQVR	2	DTQSSVLFDITGQVR2	10195.8	7446.15	10843
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	DTQSSVLFDITGQVR	DTQSSVLFDITGQVR	3	DTQSSVLFDITGQVR3	15678.5	9465.43	20083.8
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	DTQSYPEAR	DTQSYPEAR	2	DTQSYPEAR2	46918.6	46985.3	45147.9
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	DTQSYPEARPVPSEPDVPVAPLER	DTQSYPEARPVPSEPDVPVAPLER	3	DTQSYPEARPVPSEPDVPVAPLER3	20919.4	22483.3	26936.2
Q4FZX7	Q4FZX7	SRPRB_RAT	Srprb	Signal recognition particle receptor subunit beta	1	DTQTSITDSSAIYK	DTQTSITDSSAIYK	2	DTQTSITDSSAIYK2	24299.1	21247.5	18697.7
Q4FZX7	Q4FZX7	SRPRB_RAT	Srprb	Signal recognition particle receptor subunit beta	1	DTQTSITDSSAIYK	DTQTSITDSSAIYK	3	DTQTSITDSSAIYK3	2588.24		2216.94
A0A8I6ALT5	A0A8I6ALT5	A0A8I6ALT5_RAT	Dok2	Docking protein 2	1	DTSAFILETK	DTSAFILETK	2	DTSAFILETK2	37532.9	29308.8	38913.5
G3V828	G3V828	G3V828_RAT	Cnpy3	Canopy FGF signaling regulator 3	1	DTSCLAER	DTSC(UniMod:4)LAER	2	DTSC(UniMod:4)LAER2	13734.2	9966.69	7210.45
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	DTSEDIEELVEPVAAHGPK	DTSEDIEELVEPVAAHGPK	3	DTSEDIEELVEPVAAHGPK3	248463	260253	264796
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	DTSFEQHVLLHTGGK	DTSFEQHVLLHTGGK	3	DTSFEQHVLLHTGGK3	20074.9	18100.3	12351
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	DTSIMQWR	DTSIMQWR	2	DTSIMQWR2	206710	199288	228069
Q8CHM7	Q8CHM7	HACL1_RAT	Hacl1	2-hydroxyacyl-CoA lyase 1	1	DTSKPCLINIMIEPQSTR	DTSKPC(UniMod:4)LINIMIEPQSTR	3	DTSKPC(UniMod:4)LINIMIEPQSTR3	8069.46	6629.21	
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	DTSLAFESK	DTSLAFESK	2	DTSLAFESK2	57881.6	66318.6	65532.7
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	DTSLFSDEFK	DTSLFSDEFK	2	DTSLFSDEFK2	32861	29445.6	32935.1
A0A0G2JVT8	A0A8I6ARY9;A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	0	DTSLFVR	DTSLFVR	2	DTSLFVR2	23770.4	12726.8	19000.7
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	DTSLYRPALEELR	DTSLYRPALEELR	3	DTSLYRPALEELR3	112785	86176.2	110628
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	DTSLYRPALEELRR	DTSLYRPALEELRR	3	DTSLYRPALEELRR3	26337.5	22954.1	18104.8
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	DTSLYRPALEELRR	DTSLYRPALEELRR	4	DTSLYRPALEELRR4	46394.6	72348.2	52747.2
D4A932	D4A932	D4A932_RAT	Plekhm2	Pleckstrin homology and RUN domain containing M2	1	DTSMECLGQPLSK	DTSMEC(UniMod:4)LGQPLSK	2	DTSMEC(UniMod:4)LGQPLSK2	2509.68		
B0BMY6	B0BMY6	B0BMY6_RAT	Otulin	ubiquitinyl hydrolase 1	1	DTSNDPEQLLR	DTSNDPEQLLR	2	DTSNDPEQLLR2	3502.87	3805.22	
A0A8I6GIU6	A0A8I6GIU6	A0A8I6GIU6_RAT	Tial1	Tia1 cytotoxic granule-associated RNA binding protein-like 1	1	DTSNHFHVFVGDLSPEITTEDIK	DTSNHFHVFVGDLSPEITTEDIK	3	DTSNHFHVFVGDLSPEITTEDIK3	5056.04		
A0A8I6GIU6	A0A8I6GIU6	A0A8I6GIU6_RAT	Tial1	Tia1 cytotoxic granule-associated RNA binding protein-like 1	1	DTSNHFHVFVGDLSPEITTEDIK	DTSNHFHVFVGDLSPEITTEDIK	4	DTSNHFHVFVGDLSPEITTEDIK4	12955.3		3400.91
Q63372	Q63372	NRX1A_RAT	Nrxn1	Neurexin-1	1	DTSNLHTVK	DTSNLHTVK	2	DTSNLHTVK2	5999.12	4194.27	
M0RBD5	A0A8I6GE36;F1LWD1;A0A8I5ZLU0;M0RBD5	M0RBD5_RAT	ENSRNOG00000070933	Ig-like domain-containing protein	0	DTSNNQAFLK	DTSNNQAFLK	2	DTSNNQAFLK2	1.2906e+06	1.35667e+06	1.46735e+06
A0A8I5ZYE2	A0A8I5ZYE2	A0A8I5ZYE2_RAT	ENSRNOG00000065191	Ig-like domain-containing protein	1	DTSNNQVFLK	DTSNNQVFLK	2	DTSNNQVFLK2	188391	174586	186975
A0A8I6AC42	A0A8I6AC42	A0A8I6AC42_RAT	ENSRNOG00000065690	Ig-like domain-containing protein	1	DTSNTQVFLK	DTSNTQVFLK	2	DTSNTQVFLK2	149756	169455	170548
B0BNL6	B0BNL6	ARRD1_RAT	Arrdc1	Arrestin domain-containing protein 1	1	DTSPVVASLLQK	DTSPVVASLLQK	2	DTSPVVASLLQK2	3920.31	5933.52	9928.76
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	DTSSQLK	DTSSQLK	1	DTSSQLK1	1.289e+06		1.55953e+06
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	DTSSQLK	DTSSQLK	2	DTSSQLK2	1.44519e+07		1.55753e+07
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	DTSSQLKK	DTSSQLKK	1	DTSSQLKK1			205490
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	DTSSQLKK	DTSSQLKK	2	DTSSQLKK2			8.75457e+06
Q66H47	Q66H47	RM24_RAT	Mrpl24	Large ribosomal subunit protein uL24m	1	DTSVEDALER	DTSVEDALER	2	DTSVEDALER2		2682.63	3468.83
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	DTSVLQWR	DTSVLQWR	2	DTSVLQWR2	106078	76361.1	91005.2
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	DTTASAVAVGLK	DTTASAVAVGLK	2	DTTASAVAVGLK2	63988.9	74457.9	90038.7
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	DTTAWTVGR	DTTAWTVGR	2	DTTAWTVGR2	227096	235614	226234
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	DTTCMVWR	DTTC(UniMod:4)MVWR	2	DTTC(UniMod:4)MVWR2	69461.2	96947.4	82010.3
A0A8I5ZNC2	A0A8I5ZNC2	A0A8I5ZNC2_RAT	Tmed8	Transmembrane p24 trafficking protein family member 8	1	DTTEDLQK	DTTEDLQK	2	DTTEDLQK2	17784.1	12413.8	19473.4
P50408	P50408	VATF_RAT	Atp6v1f	V-type proton ATPase subunit F	1	DTTINEIEDTFR	DTTINEIEDTFR	2	DTTINEIEDTFR2	6595.8	7137.16	4126.51
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	DTTLPVTLTEWK	DTTLPVTLTEWK	2	DTTLPVTLTEWK2	43370.4	43671.7	52117
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	DTTLSYYK	DTTLSYYK	2	DTTLSYYK2	574728	553160	590932
D3ZDI7	D3ZDI7	D3ZDI7_RAT	Ppp2r5a	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	DTTLTEPVIR	DTTLTEPVIR	2	DTTLTEPVIR2	4561.15	7410.14	
P20069	P20069	MPPA_RAT	Pmpca	Mitochondrial-processing peptidase subunit alpha	1	DTTMYAVSADSK	DTTMYAVSADSK	2	DTTMYAVSADSK2	9714.79	8221.89	5630.53
F1LRE5	F1LRE5	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	1	DTTNSMVESIK	DTTNSMVESIK	2	DTTNSMVESIK2	11867.5	11374	6796.09
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	DTTPLSVLCGSDIQVVSVGIK	DTTPLSVLC(UniMod:4)GSDIQVVSVGIK	3	DTTPLSVLC(UniMod:4)GSDIQVVSVGIK3		3378.24	210.213
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	DTTSLNQAALYR	DTTSLNQAALYR	2	DTTSLNQAALYR2	101878	101994	127970
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	DTTSPMELAALEK	DTTSPMELAALEK	2	DTTSPMELAALEK2	200686	223386	207763
A0A8I5ZM79	A0A8I5ZM79	A0A8I5ZM79_RAT	Psmd7	Proteasome 26S subunit, non-ATPase 7	1	DTTVGTLSQR	DTTVGTLSQR	2	DTTVGTLSQR2	209935	186754	216256
F1LTR1	F1LTR1	WDR26_RAT	Wdr26	WD repeat-containing protein 26	1	DTTVIVWQVDADTHLLK	DTTVIVWQVDADTHLLK	2	DTTVIVWQVDADTHLLK2	662.789		
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	DTTVQSLTLQPSVK	DTTVQSLTLQPSVK	2	DTTVQSLTLQPSVK2	12574.8	7893.67	10465.3
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	DTVAGNAEGR	DTVAGNAEGR	2	DTVAGNAEGR2	21653.3		24131.7
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	DTVAIYLTPESR	DTVAIYLTPESR	2	DTVAIYLTPESR2	17633.3	17710.1	15599.1
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	DTVCSLSSGK	DTVC(UniMod:4)SLSSGK	2	DTVC(UniMod:4)SLSSGK2	10513.4	5401.88	11253.3
A8WCF8	A8WCF8	TPRGL_RAT	Tprg1l	Tumor protein p63-regulated gene 1-like protein	1	DTVDSAGTSPTAVLAAGEDAGAGR	DTVDSAGTSPTAVLAAGEDAGAGR	3	DTVDSAGTSPTAVLAAGEDAGAGR3	19409.4	14386	14687.6
B3DMA2	B3DMA2	ACD11_RAT	Acad11	Acyl-CoA dehydrogenase family member 11	1	DTVEVLPQHK	DTVEVLPQHK	2	DTVEVLPQHK2	8115.33	11846.1	11671.4
B3DMA2	B3DMA2	ACD11_RAT	Acad11	Acyl-CoA dehydrogenase family member 11	1	DTVEVLPQHK	DTVEVLPQHK	3	DTVEVLPQHK3	9353.92	14215.9	19437.6
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	DTVIENLR	DTVIENLR	2	DTVIENLR2	65875.1	61388.4	66896.3
Q6IE52	Q6IE52	MUG2_RAT	Mug2	Murinoglobulin-2	1	DTVIKVLIVEPEGIK	DTVIKVLIVEPEGIK	3	DTVIKVLIVEPEGIK3	8747.74		
Q505J9	Q505J9	ATAD1_RAT	Atad1	Outer mitochondrial transmembrane helix translocase	1	DTVILPIK	DTVILPIK	2	DTVILPIK2	13140.6	16654.8	14121.2
Q505J9	Q505J9	ATAD1_RAT	Atad1	Outer mitochondrial transmembrane helix translocase	1	DTVILPIKK	DTVILPIKK	2	DTVILPIKK2	2513.14	3638.21	2516.28
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	DTVLSALSR	DTVLSALSR	2	DTVLSALSR2	22706.1	32999.9	24073.6
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	DTVPLLAGGASGQLGNWMSPDEFQR	DTVPLLAGGASGQLGNWMSPDEFQR	3	DTVPLLAGGASGQLGNWMSPDEFQR3	27238.1	32467.4	38878
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	DTVTISGVR	DTVTISGVR	2	DTVTISGVR2	5560.24	11341.7	9847.19
Q6IE52	Q6IE52	MUG2_RAT	Mug2	Murinoglobulin-2	1	DTVVETIR	DTVVETIR	2	DTVVETIR2	892036	728246	619210
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	DTVVKPVIVEPEGIEK	DTVVKPVIVEPEGIEK	2	DTVVKPVIVEPEGIEK2	1.75319e+06	1.42973e+06	1.13686e+06
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	DTVVKPVIVEPEGIEK	DTVVKPVIVEPEGIEK	3	DTVVKPVIVEPEGIEK3	1.09235e+07	1.03093e+07	9.85279e+06
P14046	A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	DTVVKVLIVEPEGIK	DTVVKVLIVEPEGIK	2	DTVVKVLIVEPEGIK2	9839.46	4734.8	5442.13
P14046	A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	DTVVKVLIVEPEGIK	DTVVKVLIVEPEGIK	3	DTVVKVLIVEPEGIK3	100440	32927.1	38791.6
Q5XIN7	Q5XIN7	PMGT1_RAT	Pomgnt1	Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1	1	DTWAFVGR	DTWAFVGR	2	DTWAFVGR2	5240.9	7410.42	6036.05
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	DTWFQLQHVDADSEVQGK	DTWFQLQHVDADSEVQGK	3	DTWFQLQHVDADSEVQGK3	167427	180150	193646
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	DTWHQVYR	DTWHQVYR	2	DTWHQVYR2	23247.8	14588.2	12081.1
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	DTYAWHK	DTYAWHK	2	DTYAWHK2	7811.48	9843.92	3558.68
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	DTYDFDIAMLR	DTYDFDIAMLR	2	DTYDFDIAMLR2	109805	73817	7.00276e+06
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	DTYDFDIAMLR	DTYDFDIAMLR	3	DTYDFDIAMLR3	273841	346863	338962
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	DTYFVTGIVSWGEGCAR	DTYFVTGIVSWGEGC(UniMod:4)AR	2	DTYFVTGIVSWGEGC(UniMod:4)AR2	3.06349e+06	3.3194e+06	3.33413e+06
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	DTYFVTGIVSWGEGCAR	DTYFVTGIVSWGEGC(UniMod:4)AR	3	DTYFVTGIVSWGEGC(UniMod:4)AR3	1.02662e+06	1.09469e+06	1.09703e+06
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	DTYIENEK	DTYIENEK	2	DTYIENEK2	40982.4	47336.5	50639
Q68FS8	Q68FS8	Q68FS8_RAT	Rtca	RNA 3'-terminal-phosphate cyclase (ATP)	1	DTYIIECEGVGMANPHL	DTYIIEC(UniMod:4)EGVGMANPHL	2	DTYIIEC(UniMod:4)EGVGMANPHL2	8063.63	7095.73	5954.96
Q68FS8	Q68FS8	Q68FS8_RAT	Rtca	RNA 3'-terminal-phosphate cyclase (ATP)	1	DTYIIECEGVGMANPHL	DTYIIEC(UniMod:4)EGVGMANPHL	3	DTYIIEC(UniMod:4)EGVGMANPHL3		3293.64	
D4A5L7	D4A5L7	D4A5L7_RAT	Slc35d3	Solute carrier family 35, member D3	1	DTYLEVWR	DTYLEVWR	2	DTYLEVWR2	29534.5	38142.8	34679
F7FLB2	F7FLB2	F7FLB2_RAT	Pgm2	phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	1	DTYMLSSTVSSK	DTYMLSSTVSSK	2	DTYMLSSTVSSK2	5696.62	4601.88	5900.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	DTYQSLYK	DTYQSLYK	2	DTYQSLYK2	597847	749731	586825
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	DTYQSLYKK	DTYQSLYKK	2	DTYQSLYKK2	30688.7	37209.5	38621.2
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	DTYQSLYKK	DTYQSLYKK	3	DTYQSLYKK3	14773.6	25899.4	
A0A8I6ARU0	A0A8I6ARU0	A0A8I6ARU0_RAT	Gcnt4	Glucosaminyl (N-acetyl) transferase 4	1	DTYSPDEHFWATLIR	DTYSPDEHFWATLIR	3	DTYSPDEHFWATLIR3	3091.12		
Q6F596	Q6F596	GGPPS_RAT	Ggps1	Geranylgeranyl pyrophosphate synthase	1	DTYTCPTEEEYK	DTYTC(UniMod:4)PTEEEYK	2	DTYTC(UniMod:4)PTEEEYK2	7045.02	1832.49	5248.87
Q03343	Q04400;Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	0	DVAAHFLAR	DVAAHFLAR	2	DVAAHFLAR2	31574	19201.9	25421.6
Q6AYH6	Q6AYH6	EMC10_RAT	Emc10	ER membrane protein complex subunit 10	1	DVAAVNGLYR	DVAAVNGLYR	2	DVAAVNGLYR2	28210.6	13464.2	37449.7
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	DVAAVVSK	DVAAVVSK	1	DVAAVVSK1	1281.76	1951.01	1707.22
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	DVAAVVSK	DVAAVVSK	2	DVAAVVSK2	171188	194424	178751
F1LVV4	F1LVV4	F1LVV4_RAT	Rcc2	Regulator of chromosome condensation 2	1	DVACGANHTLVLDSQK	DVAC(UniMod:4)GANHTLVLDSQK	3	DVAC(UniMod:4)GANHTLVLDSQK3	6211.64	10576.2	7292.04
F1LVV4	F1LVV4	F1LVV4_RAT	Rcc2	Regulator of chromosome condensation 2	1	DVACGANHTLVLDSQKR	DVAC(UniMod:4)GANHTLVLDSQKR	3	DVAC(UniMod:4)GANHTLVLDSQKR3	3652.96		
P08661	P08661;Q7TMC0	MBL2_RAT	Mbl2	Mannose-binding protein C	0	DVAFLGITDQR	DVAFLGITDQR	2	DVAFLGITDQR2	173269	152866	192632
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	DVAGDIFHQQCK	DVAGDIFHQQC(UniMod:4)K	2	DVAGDIFHQQC(UniMod:4)K2	15425.4	16982.5	23399.6
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	DVAGDIFHQQCK	DVAGDIFHQQC(UniMod:4)K	3	DVAGDIFHQQC(UniMod:4)K3	282640	255710	295005
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	DVAGGLR	DVAGGLR	1	DVAGGLR1	5048.42	3869.37	
Q08851	Q08851	STX5_RAT	Stx5	Syntaxin-5	1	DVAIDMMDPR	DVAIDMMDPR	2	DVAIDMMDPR2	32044.4	37410.6	25654.4
Q63009	Q63009;A0A0G2K9I8	ANM1_RAT	Prmt1	Protein arginine N-methyltransferase 1	0	DVAIKEPLVDVVDPK	DVAIKEPLVDVVDPK	2	DVAIKEPLVDVVDPK2	13235.2	4580.15	13131.8
Q63009	Q63009;A0A0G2K9I8	ANM1_RAT	Prmt1	Protein arginine N-methyltransferase 1	0	DVAIKEPLVDVVDPK	DVAIKEPLVDVVDPK	3	DVAIKEPLVDVVDPK3	24622.2	17543.5	26143.6
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	DVAITNDKPAAAIGMAGSFTDAER	DVAITNDKPAAAIGMAGSFTDAER	3	DVAITNDKPAAAIGMAGSFTDAER3	15830	14650.1	10863.1
Q3B7U1	Q3B7U1	Q3B7U1_RAT	Maged2	MAGE family member D2	1	DVALLQGR	DVALLQGR	2	DVALLQGR2	76173	74322	66628.6
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	DVALLYEALQR	DVALLYEALQR	2	DVALLYEALQR2	7445.7	11441.8	9369.82
O54715	O54715	VAS1_RAT	Atp6ap1	V-type proton ATPase subunit S1	1	DVAMVAGGLGR	DVAMVAGGLGR	2	DVAMVAGGLGR2	2647.45	726.543	364.49
D3ZUQ1	D3ZUQ1	D3ZUQ1_RAT	Lipo1	Lipase	1	DVANLVPK	DVANLVPK	1	DVANLVPK1	23348.5	18714.1	20926
D3ZUQ1	D3ZUQ1	D3ZUQ1_RAT	Lipo1	Lipase	1	DVANLVPK	DVANLVPK	2	DVANLVPK2	772362	675062	763794
D4AB01	D4AB01	D4AB01_RAT	Hint2	Histidine triad nucleotide binding protein 2	1	DVAPQAPVHFLVIPR	DVAPQAPVHFLVIPR	2	DVAPQAPVHFLVIPR2	7966.63	10734.1	8863.26
D4AB01	D4AB01	D4AB01_RAT	Hint2	Histidine triad nucleotide binding protein 2	1	DVAPQAPVHFLVIPR	DVAPQAPVHFLVIPR	3	DVAPQAPVHFLVIPR3	56693.6	81895	75239.2
A0A0G2JZH0	A0A0G2JZH0	A0A0G2JZH0_RAT	Cab39	Calcium binding protein 39	1	DVAQIFNNILR	DVAQIFNNILR	2	DVAQIFNNILR2		7882.67	9188.17
Q5U2R0	Q5U2R0	MAT2B_RAT	Mat2b	Methionine adenosyltransferase 2 subunit beta	1	DVASVCR	DVASVC(UniMod:4)R	2	DVASVC(UniMod:4)R2	117608	162280	161717
Q4G050	Q4G050	MKNK1_RAT	Mknk1	MAP kinase-interacting serine/threonine-protein kinase 1	1	DVATALDFLHTK	DVATALDFLHTK	2	DVATALDFLHTK2	3524.29	2059.4	3704.77
Q4G050	Q4G050	MKNK1_RAT	Mknk1	MAP kinase-interacting serine/threonine-protein kinase 1	1	DVATALDFLHTK	DVATALDFLHTK	3	DVATALDFLHTK3	7178.08	14795.7	8280.67
D3ZFQ8	D3ZFQ8	D3ZFQ8_RAT	Cyc1	Cytochrome c-1	1	DVATFLR	DVATFLR	2	DVATFLR2	447294	447346	460556
Q9Z2F5	Q9Z2F5	CTBP1_RAT	Ctbp1	C-terminal-binding protein 1	1	DVATVAFCDAQSTQEIHEK	DVATVAFC(UniMod:4)DAQSTQEIHEK	3	DVATVAFC(UniMod:4)DAQSTQEIHEK3	27264.3	31796.1	22378.4
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	DVAVMQLR	DVAVMQLR	2	DVAVMQLR2	190730	217654	204882
A0A0G2QC02	A0A0G2QC02	A0A0G2QC02_RAT	Skic2	Ski2 like RNA helicase	1	DVAVVEGGLR	DVAVVEGGLR	2	DVAVVEGGLR2	168119	177005	177019
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	DVAVYNSISLSPMHIYIVGRPTK	DVAVYNSISLSPMHIYIVGRPTK	4	DVAVYNSISLSPMHIYIVGRPTK4			3737.47
Q5XFW8	Q5XFW8	SEC13_RAT	Sec13	Protein SEC13 homolog	1	DVAWAPSIGLPTSTIASCSQDGR	DVAWAPSIGLPTSTIASC(UniMod:4)SQDGR	3	DVAWAPSIGLPTSTIASC(UniMod:4)SQDGR3	38526.2	34125.4	40764
P28042	P28042	SSBP_RAT	Ssbp1	Single-stranded DNA-binding protein, mitochondrial	1	DVAYQYVK	DVAYQYVK	2	DVAYQYVK2	46148.8	39738.6	30755
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	DVCEAMEYLESK	DVC(UniMod:4)EAMEYLESK	2	DVC(UniMod:4)EAMEYLESK2	26397.8	26340.7	28212.4
D4A5Z0	A0A8I6AML2;D4A5Z0	D4A5Z0_RAT	Csgalnact2	Hexosyltransferase	0	DVCIHQDK	DVC(UniMod:4)IHQDK	2	DVC(UniMod:4)IHQDK2	2580.56		
A0JPM9	A0JPM9;A0A8I6GKU6	EIF3J_RAT	Eif3j	Eukaryotic translation initiation factor 3 subunit J	0	DVCISLEIDDLKK	DVC(UniMod:4)ISLEIDDLKK	3	DVC(UniMod:4)ISLEIDDLKK3	16975.1	23841	17532.4
F1LPV0	F1LPV0	F1LPV0_RAT	Nars1	asparagine--tRNA ligase	1	DVCLYPR	DVC(UniMod:4)LYPR	2	DVC(UniMod:4)LYPR2	45098.5	42771.8	47739.4
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	DVCSGETNVIFITNPLNEDLQHPIHVK	DVC(UniMod:4)SGETNVIFITNPLNEDLQHPIHVK	4	DVC(UniMod:4)SGETNVIFITNPLNEDLQHPIHVK4	7612.68	7979.67	8188.79
Q6P6Q2	A0A0G2JVA8;A0A8I5ZMI8;Q6IG04;Q6P6Q2;A0A8I6G380;Q4FZU2	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	0	DVDAAYMNK	DVDAAYMNK	2	DVDAAYMNK2	45976.2	31750.7	30134.5
Q5PQL3	Q5PQL3	SPP2B_RAT	Sppl2b	Signal peptide peptidase-like 2B	1	DVDASLSEQPR	DVDASLSEQPR	2	DVDASLSEQPR2	2813.36	7047.7	3093.13
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	DVDDETKEPLPAR	DVDDETKEPLPAR	2	DVDDETKEPLPAR2	8100.06	5592.48	4584.38
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	DVDDETKEPLPAR	DVDDETKEPLPAR	3	DVDDETKEPLPAR3	99363	95504.2	104921
A0A8I5ZS69	A0A8I5ZS69	A0A8I5ZS69_RAT	Snx6	Sorting nexin	1	DVDDFFEHER	DVDDFFEHER	2	DVDDFFEHER2	8452.83	8058.08	8162.66
A0A8I5ZS69	A0A8I5ZS69	A0A8I5ZS69_RAT	Snx6	Sorting nexin	1	DVDDFFEHER	DVDDFFEHER	3	DVDDFFEHER3	58846	68810.8	74215.9
O35806	O35806	LTBP2_RAT	Ltbp2	Latent-transforming growth factor beta-binding protein 2	1	DVDECASR	DVDEC(UniMod:4)ASR	2	DVDEC(UniMod:4)ASR2			29306
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	DVDECKEVPDACFNHNGEHR	DVDEC(UniMod:4)KEVPDAC(UniMod:4)FNHNGEHR	3	DVDEC(UniMod:4)KEVPDAC(UniMod:4)FNHNGEHR3	465098	384363	394791
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	DVDECKEVPDACFNHNGEHR	DVDEC(UniMod:4)KEVPDAC(UniMod:4)FNHNGEHR	4	DVDEC(UniMod:4)KEVPDAC(UniMod:4)FNHNGEHR4	3.80874e+06	4.72876e+06	4.71753e+06
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	DVDECQLFQDQVCK	DVDEC(UniMod:4)QLFQDQVC(UniMod:4)K	2	DVDEC(UniMod:4)QLFQDQVC(UniMod:4)K2	34662.6	27203.3	34860.5
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	DVDECQLFQDQVCK	DVDEC(UniMod:4)QLFQDQVC(UniMod:4)K	3	DVDEC(UniMod:4)QLFQDQVC(UniMod:4)K3	3068.19	3127.66	8976.85
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	DVDECSLK	DVDEC(UniMod:4)SLK	2	DVDEC(UniMod:4)SLK2	88986.6	76199.5	99309.4
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	DVDECSLKPSVCGTAVCK	DVDEC(UniMod:4)SLKPSVC(UniMod:4)GTAVC(UniMod:4)K	3	DVDEC(UniMod:4)SLKPSVC(UniMod:4)GTAVC(UniMod:4)K3	16401.9	8190.08	18388.8
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DVDEIEAWISEK	DVDEIEAWISEK	2	DVDEIEAWISEK2	395110	382203	396817
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DVDEIEAWISEK	DVDEIEAWISEK	3	DVDEIEAWISEK3	5959.89	8245.53	4878.07
P70483	P70483	STRN_RAT	Strn	Striatin	1	DVDELPSLQPSVGSPSR	DVDELPSLQPSVGSPSR	2	DVDELPSLQPSVGSPSR2	20078.7	18621.5	16879.7
P70483	P70483	STRN_RAT	Strn	Striatin	1	DVDELPSLQPSVGSPSRPSSSR	DVDELPSLQPSVGSPSRPSSSR	3	DVDELPSLQPSVGSPSRPSSSR3	384484	388116	425398
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DVDETIGWIK	DVDETIGWIK	2	DVDETIGWIK2	239140	260387	277179
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	DVDEVSSLLR	DVDEVSSLLR	2	DVDEVSSLLR2	417870	418414	480272
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	DVDFELIK	DVDFELIK	1	DVDFELIK1	3317.88	7177.1	4654.85
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	DVDFELIK	DVDFELIK	2	DVDFELIK2	345008	365597	363998
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	DVDGLTSINAGK	DVDGLTSINAGK	2	DVDGLTSINAGK2	4134.85	6487.12	9625.73
Q6AXY8	Q6AXY8	Q6AXY8_RAT	Dhrs1	Dehydrogenase/reductase 1	1	DVDGRPVQDYFSLGYALSQVSSLR	DVDGRPVQDYFSLGYALSQVSSLR	3	DVDGRPVQDYFSLGYALSQVSSLR3	1823.09		
D3ZGJ0	D3ZGJ0	D3ZGJ0_RAT	Dhx32	DEAH-box helicase 32 (putative)	1	DVDGSGNYLMLTHK	DVDGSGNYLMLTHK	3	DVDGSGNYLMLTHK3	711.657	3023.23	3251.12
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	DVDGVTDVNLGK	DVDGVTDVNLGK	2	DVDGVTDVNLGK2	24290.8	16367.5	26798.1
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	DVDHDFVGDACDSDQDQDGDGHQDSR	DVDHDFVGDAC(UniMod:4)DSDQDQDGDGHQDSR	3	DVDHDFVGDAC(UniMod:4)DSDQDQDGDGHQDSR3	81022.3	90329.6	81134.3
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	DVDHDFVGDACDSDQDQDGDGHQDSR	DVDHDFVGDAC(UniMod:4)DSDQDQDGDGHQDSR	4	DVDHDFVGDAC(UniMod:4)DSDQDQDGDGHQDSR4	597845	702094	728059
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	DVDIDSYPDEELPCSAR	DVDIDSYPDEELPC(UniMod:4)SAR	3	DVDIDSYPDEELPC(UniMod:4)SAR3	1.01113e+06	1.09803e+06	1.16913e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	DVDIIDHHDNTYTVK	DVDIIDHHDNTYTVK	2	DVDIIDHHDNTYTVK2	188097	159530	154863
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	DVDIIDHHDNTYTVK	DVDIIDHHDNTYTVK	3	DVDIIDHHDNTYTVK3	5.23628e+06	5.27739e+06	6.02847e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	DVDIIDHHDNTYTVK	DVDIIDHHDNTYTVK	4	DVDIIDHHDNTYTVK4	1.77759e+06	1.91323e+06	2.293e+06
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	DVDLEFLAK	DVDLEFLAK	2	DVDLEFLAK2	1.25701e+06	1.2522e+06	1.29978e+06
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	DVDLPAENYEK	DVDLPAENYEK	2	DVDLPAENYEK2	33097.4	27572.4	28144.9
Q66H54	Q66H54	FHI1B_RAT	Fhip1b	FHF complex subunit HOOK-interacting protein 1B	1	DVDLYGR	DVDLYGR	2	DVDLYGR2	13838.9	12694	
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	DVDNALR	DVDNALR	2	DVDNALR2	4.11554e+06	3.95289e+06	4.07963e+06
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	DVDPDVIQTHLDK	DVDPDVIQTHLDK	2	DVDPDVIQTHLDK2	32222.4	21811.9	16220.1
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	DVDPDVIQTHLDK	DVDPDVIQTHLDK	3	DVDPDVIQTHLDK3	98739.1	104995	115489
P07824	P07824	ARGI1_RAT	Arg1	Arginase-1	1	DVDPGEHYIIK	DVDPGEHYIIK	3	DVDPGEHYIIK3	23200.4	14459	13926
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	DVDQNLMDR	DVDQNLMDR	2	DVDQNLMDR2	190463	221204	175977
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DVDRIIGLDQVAGMSETALPGAFK	DVDRIIGLDQVAGMSETALPGAFK	3	DVDRIIGLDQVAGMSETALPGAFK3	39337.4	14672.1	57007.9
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	DVDVSEGPQHSDR	DVDVSEGPQHSDR	3	DVDVSEGPQHSDR3	15802.3	21558.2	
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	DVDVSEGPQHSDRK	DVDVSEGPQHSDRK	3	DVDVSEGPQHSDRK3	62799.4	86213.1	61554.8
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	DVDVSEGPQHSDRK	DVDVSEGPQHSDRK	4	DVDVSEGPQHSDRK4	11684.3	14795	
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	DVEADEEDSR	DVEADEEDSR	2	DVEADEEDSR2	32378.3	36849.6	28540.8
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	DVEADEEDSRK	DVEADEEDSRK	2	DVEADEEDSRK2			2783.49
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	DVEADEEDSRK	DVEADEEDSRK	3	DVEADEEDSRK3	78378.4		25565.3
Q6AYN2	Q6AYN2	SARAF_RAT	Saraf	Store-operated calcium entry-associated regulatory factor	1	DVEALTLYSDR	DVEALTLYSDR	2	DVEALTLYSDR2	1484.83		1574.98
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	DVEAPQISCPNDIK	DVEAPQISC(UniMod:4)PNDIK	2	DVEAPQISC(UniMod:4)PNDIK2	145551	154977	134914
G3V7K5	G3V7K5	G3V7K5_RAT	Npc1	NPC intracellular cholesterol transporter 1	1	DVEAPSSNEK	DVEAPSSNEK	2	DVEAPSSNEK2		7960.4	
A0A8I6APH2	A0A8I6APH2	A0A8I6APH2_RAT	Tgfbrap1	Transforming growth factor, beta receptor associated protein 1	1	DVEATETQAK	DVEATETQAK	2	DVEATETQAK2	1740.81		
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	DVEDDMQR	DVEDDMQR	2	DVEDDMQR2	23285.8	39162.9	26066.2
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DVEDEETWIR	DVEDEETWIR	2	DVEDEETWIR2	171324	187731	169963
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	DVEDEILWVGER	DVEDEILWVGER	2	DVEDEILWVGER2	280098	254058	248634
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	DVEDEILWVGER	DVEDEILWVGER	3	DVEDEILWVGER3	88972.6	88869.4	100154
P70564	P70564	SPB5_RAT	Serpinb5	Serpin B5	1	DVEDESTGLEK	DVEDESTGLEK	2	DVEDESTGLEK2	5659.4		
B5DF91	B5DF91	ELAV1_RAT	Elavl1	ELAV-like protein 1	1	DVEDMFSR	DVEDMFSR	2	DVEDMFSR2	18019.1	12583.9	13921.7
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	DVEDNCSLMYLNEATLLHNVK	DVEDNC(UniMod:4)SLMYLNEATLLHNVK	3	DVEDNC(UniMod:4)SLMYLNEATLLHNVK3	6984.59		
P37727	P37727	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	1	DVEEAGALQK	DVEEAGALQK	2	DVEEAGALQK2	3385.1	13427.1	14172.8
Q6U6G5	Q6U6G5	ZC3HF_RAT	Zc3h15	Zinc finger CCCH domain-containing protein 15	1	DVEETGITVASLER	DVEETGITVASLER	2	DVEETGITVASLER2	6331.53	12534.3	12977.6
Q711G3	Q711G3	IAH1_RAT	Iah1	Isoamyl acetate-hydrolyzing esterase 1 homolog	1	DVEETKPELSLLGDGDH	DVEETKPELSLLGDGDH	3	DVEETKPELSLLGDGDH3	9731.07	5451.75	7268.89
Q9R0I8	O88377;Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	0	DVEFLAQLK	DVEFLAQLK	2	DVEFLAQLK2	138865	129737	125442
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	DVEGDSVPKPLPPALSVISSASK	DVEGDSVPKPLPPALSVISSASK	3	DVEGDSVPKPLPPALSVISSASK3	38449.5	58458.9	47134.5
P18395	P18395	CSDE1_RAT	Csde1	Cold shock domain-containing protein E1	1	DVEGSTSPQIGDK	DVEGSTSPQIGDK	2	DVEGSTSPQIGDK2	8331.11	7655.64	7665.23
Q62720	Q62720	ZNT1_RAT	Slc30a1	Proton-coupled zinc antiporter SLC30A1	1	DVEGVEEVHELHVWQLAGSR	DVEGVEEVHELHVWQLAGSR	4	DVEGVEEVHELHVWQLAGSR4	8117.09	14324.3	15633.5
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	DVEILLDSKPVSSWPAYFSIVK	DVEILLDSKPVSSWPAYFSIVK	3	DVEILLDSKPVSSWPAYFSIVK3	10425.3	11499.8	13063.2
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	DVEIQALHAR	DVEIQALHAR	2	DVEIQALHAR2	5254.5	2938.02	1666.42
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	DVEIQALHAR	DVEIQALHAR	3	DVEIQALHAR3	14062.2	11406.1	12155.4
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	DVELNELEPEK	DVELNELEPEK	2	DVELNELEPEK2	4043.58		
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	DVELNELEPEKQPMNAADGAAAGEK	DVELNELEPEKQPMNAADGAAAGEK	3	DVELNELEPEKQPMNAADGAAAGEK3	6011.23	5213.71	5800.83
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	DVENPDEPR	DVENPDEPR	2	DVENPDEPR2	30652.6	30976.2	21036.4
A0A0G2K6C7	A0A0G2K6C7	A0A0G2K6C7_RAT	Trim5	Tripartite motif-containing 5	1	DVENVQSEFK	DVENVQSEFK	2	DVENVQSEFK2	29123.9	28574.9	23857.9
P97612	P97612	FAAH1_RAT	Faah	Fatty-acid amide hydrolase 1	1	DVESLALCLK	DVESLALC(UniMod:4)LK	2	DVESLALC(UniMod:4)LK2	8453.34	8987.66	4264.66
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	DVETLQQTIQEK	DVETLQQTIQEK	2	DVETLQQTIQEK2	4013.25	4942.39	5138.48
B2GUY0	B2GUY0	MA1B1_RAT	Man1b1	Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase	1	DVEVKPADR	DVEVKPADR	2	DVEVKPADR2	1639.25		3767.63
P83888	P83888;A0A8I6A5N2	TBG1_RAT	Tubg1	Tubulin gamma-1 chain	0	DVFFYQADDEHYIPR	DVFFYQADDEHYIPR	3	DVFFYQADDEHYIPR3	47834.6	42456.4	50393.6
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	DVFGGMVLLK	DVFGGMVLLK	2	DVFGGMVLLK2	11325.3	12423.5	15397
F1M332	F1M332	F1M332_RAT	Arhgap28	Rho GTPase activating protein 28	1	DVFGVSESPPSDSCEHATQLDSTK	DVFGVSESPPSDSC(UniMod:4)EHATQLDSTK	3	DVFGVSESPPSDSC(UniMod:4)EHATQLDSTK3	8716.33	9584.24	13541.9
Q62720	Q62720	ZNT1_RAT	Slc30a1	Proton-coupled zinc antiporter SLC30A1	1	DVFHNHGIHATTIQPEFASVGSK	DVFHNHGIHATTIQPEFASVGSK	3	DVFHNHGIHATTIQPEFASVGSK3	21409.1	13864.9	13010
Q62720	Q62720	ZNT1_RAT	Slc30a1	Proton-coupled zinc antiporter SLC30A1	1	DVFHNHGIHATTIQPEFASVGSK	DVFHNHGIHATTIQPEFASVGSK	4	DVFHNHGIHATTIQPEFASVGSK4	122163	87229	72096.3
O08618	O08618	KPRB_RAT	Prpsap2	Phosphoribosyl pyrophosphate synthase-associated protein 2	1	DVFIIQTVSK	DVFIIQTVSK	2	DVFIIQTVSK2	2525.8	4126.79	3048.54
P18421	P18421	PSB1_RAT	Psmb1	Proteasome subunit beta type-1	1	DVFISAAER	DVFISAAER	2	DVFISAAER2	2.94489e+06	3.05342e+06	3.45471e+06
P18421	P18421	PSB1_RAT	Psmb1	Proteasome subunit beta type-1	1	DVFISAAERDVYTGDALR	DVFISAAERDVYTGDALR	3	DVFISAAERDVYTGDALR3	68000.4	101668	140714
P08650	P08650	CO5_RAT	C5	Complement C5	1	DVFLEMNIPYSVVR	DVFLEMNIPYSVVR	2	DVFLEMNIPYSVVR2	133693	119898	112097
P08650	P08650	CO5_RAT	C5	Complement C5	1	DVFLEMNIPYSVVR	DVFLEMNIPYSVVR	3	DVFLEMNIPYSVVR3	30125	31580.6	33285.8
D3ZXY2	D3ZXY2	D3ZXY2_RAT	Pdzd8	PDZ domain containing 8	1	DVFLGDTVPYIK	DVFLGDTVPYIK	2	DVFLGDTVPYIK2	5969.58	10457.6	4314.02
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	DVFLGHTNVEEIK	DVFLGHTNVEEIK	2	DVFLGHTNVEEIK2	48669.1	27202.6	35601
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	DVFLGHTNVEEIK	DVFLGHTNVEEIK	3	DVFLGHTNVEEIK3	774102	471663	493234
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	DVFLGHTNVEEIKK	DVFLGHTNVEEIKK	2	DVFLGHTNVEEIKK2	65944.5	37567.9	32230.7
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	DVFLGHTNVEEIKK	DVFLGHTNVEEIKK	3	DVFLGHTNVEEIKK3	2.16106e+06	1.58926e+06	1.42358e+06
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	DVFLGHTNVEEIKK	DVFLGHTNVEEIKK	4	DVFLGHTNVEEIKK4	970473	770873	700118
P02770	P02770	ALBU_RAT	Alb	Albumin	1	DVFLGTFLYEYSR	DVFLGTFLYEYSR	2	DVFLGTFLYEYSR2	273727	311160	317767
P02770	P02770	ALBU_RAT	Alb	Albumin	1	DVFLGTFLYEYSR	DVFLGTFLYEYSR	3	DVFLGTFLYEYSR3	2157.23	4462.78	5293.72
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	DVFLMLK	DVFLMLK	1	DVFLMLK1	17176.6	18888.6	18949.6
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	DVFLMLK	DVFLMLK	2	DVFLMLK2	564899	496688	494593
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	DVFQHSQSR	DVFQHSQSR	2	DVFQHSQSR2	12990.1	11379.8	7548.17
P61354	A0A8I5ZSW2;D3ZTK5;A0A8I5ZVA1;P61354	RL27_RAT	Rpl27	Large ribosomal subunit protein eL27	0	DVFRDPALKR	DVFRDPALKR	3	DVFRDPALKR3	23935.6	20680.8	23227.3
Q63556	Q63556	SPA3M_RAT	Serpina3m	Serine protease inhibitor A3M (Fragment)	1	DVFSQQADLSR	DVFSQQADLSR	2	DVFSQQADLSR2	475320	480598	478493
Q6Q0N1	Q6Q0N1	CNDP2_RAT	Cndp2	Cytosolic non-specific dipeptidase	1	DVGAGTLLHSCK	DVGAGTLLHSC(UniMod:4)K	3	DVGAGTLLHSC(UniMod:4)K3	13370.2	15527.2	20360.5
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	DVGAVHAGR	DVGAVHAGR	2	DVGAVHAGR2	138471	152088	140313
F1LVL6	F1LVL6	F1LVL6_RAT	Crtc3	CREB regulated transcription coactivator 3	1	DVGFDQQPMRPSPAFPQQVPLVQQSHR	DVGFDQQPMRPSPAFPQQVPLVQQSHR	4	DVGFDQQPMRPSPAFPQQVPLVQQSHR4		17232.5	4589.86
D3ZTD6	D3ZTD6	D3ZTD6_RAT	Nek3	NIMA-related kinase 3	1	DVGGEQLLGER	DVGGEQLLGER	2	DVGGEQLLGER2	7833.7		3851.82
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	DVGGIVLANACGPCIGQWDR	DVGGIVLANAC(UniMod:4)GPC(UniMod:4)IGQWDR	3	DVGGIVLANAC(UniMod:4)GPC(UniMod:4)IGQWDR3	30213.5	27589.7	37103.6
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	DVGGIVLANACGPCIGQWDRK	DVGGIVLANAC(UniMod:4)GPC(UniMod:4)IGQWDRK	3	DVGGIVLANAC(UniMod:4)GPC(UniMod:4)IGQWDRK3	11193.8	17507.8	18617.3
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	DVGHNIYILAHQLAR	DVGHNIYILAHQLAR	3	DVGHNIYILAHQLAR3	5699.9	6979.58	6561.76
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	DVGHNIYILAHQLAR	DVGHNIYILAHQLAR	4	DVGHNIYILAHQLAR4	7015.02	3940.11	5975.66
P02764	P02764	A1AG_RAT	Orm1	Alpha-1-acid glycoprotein	1	DVGMDESEIVFVDWTK	DVGMDESEIVFVDWTK	2	DVGMDESEIVFVDWTK2	17371.7	26061.3	16320.7
P02764	P02764	A1AG_RAT	Orm1	Alpha-1-acid glycoprotein	1	DVGMDESEIVFVDWTKDK	DVGMDESEIVFVDWTKDK	3	DVGMDESEIVFVDWTKDK3	17464.9	8397.96	13246.6
A0A8I5ZS67	A0A8I5ZS67	A0A8I5ZS67_RAT	Gigyf2	GRB10 interacting GYF protein 2	1	DVGRPNFEESGPTSVGR	DVGRPNFEESGPTSVGR	3	DVGRPNFEESGPTSVGR3	12688.7	13155.6	15593.8
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	DVGSSAWAAGPSVAEEK	DVGSSAWAAGPSVAEEK	2	DVGSSAWAAGPSVAEEK2	21248.2	16108	19484.4
D3ZRJ7	D3ZRJ7	D3ZRJ7_RAT	Lrrk1	non-specific serine/threonine protein kinase	1	DVGSTIGCQK	DVGSTIGC(UniMod:4)QK	2	DVGSTIGC(UniMod:4)QK2	6112.8	2762.73	2736.72
Q498R1	Q498R1	MTRR_RAT	Mtrr	Methionine synthase reductase	1	DVHDALVEIISK	DVHDALVEIISK	3	DVHDALVEIISK3	3242.36	3580.5	2478.47
Q80WE1	Q80WE1	FMR1_RAT	Fmr1	Fragile X messenger ribonucleoprotein 1	1	DVHEDSITVAFENNWQPER	DVHEDSITVAFENNWQPER	3	DVHEDSITVAFENNWQPER3	2557.61		
A0A0G2K516	A0A0G2K516	A0A0G2K516_RAT	Stx11	Syntaxin 11	1	DVHELFLQMAVLVEK	DVHELFLQMAVLVEK	3	DVHELFLQMAVLVEK3	7722.66	11630.9	3937.26
A0A8I5ZW56	A0A8I5ZW56	A0A8I5ZW56_RAT	Clec16a	C-type lectin domain containing 16A	1	DVHLACLEGAR	DVHLAC(UniMod:4)LEGAR	3	DVHLAC(UniMod:4)LEGAR3	14624.8	3756.85	13477
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	DVHLEIPDGADSFIPK	DVHLEIPDGADSFIPK	2	DVHLEIPDGADSFIPK2	15568.3	16375.8	15434
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	DVHLEIPDGADSFIPK	DVHLEIPDGADSFIPK	3	DVHLEIPDGADSFIPK3	49646	65277.7	69112.3
Q5M872	Q5M872	DPEP2_RAT	Dpep2	Dipeptidase 2	1	DVHSFYSSVK	DVHSFYSSVK	2	DVHSFYSSVK2	9455.64	9460.46	6221.7
Q5M872	Q5M872	DPEP2_RAT	Dpep2	Dipeptidase 2	1	DVHSFYSSVK	DVHSFYSSVK	3	DVHSFYSSVK3	5392.02		5378.93
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	DVIATFTDHCIK	DVIATFTDHC(UniMod:4)IK	2	DVIATFTDHC(UniMod:4)IK2	4521.71	2935.03	4589.51
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	DVIATFTDHCIK	DVIATFTDHC(UniMod:4)IK	3	DVIATFTDHC(UniMod:4)IK3	31825.3	27504.8	33134
P50282	P50282	MMP9_RAT	Mmp9	Matrix metalloproteinase-9	1	DVIDDSFAR	DVIDDSFAR	2	DVIDDSFAR2	33682.8	35562.3	25207.1
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	DVIEEQEEQMAEFYR	DVIEEQEEQMAEFYR	2	DVIEEQEEQMAEFYR2	6203.85	9673.61	5623.22
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	DVIEEQEEQMAEFYR	DVIEEQEEQMAEFYR	3	DVIEEQEEQMAEFYR3	12833.7	19533.3	14201.6
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	DVIEEQEEQMAEFYRENEEK	DVIEEQEEQMAEFYRENEEK	3	DVIEEQEEQMAEFYRENEEK3	299014	243516	328455
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	DVIEEVTEAVVGK	DVIEEVTEAVVGK	2	DVIEEVTEAVVGK2	7604.99	9465.59	11968.1
P63324	A0A8I6GKR8;A0A8I6AWW2;A0A8I6G807;D3ZHB3;P63324;D3ZV36;A0A8I6AKK1	RS12_RAT	Rps12	Small ribosomal subunit protein eS12	0	DVIEEYFK	DVIEEYFK	2	DVIEEYFK2	121885	119668	112384
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	DVIEVAQMK	DVIEVAQMK	2	DVIEVAQMK2	41757.1	37274.5	33818.3
Q99M63	Q99M63	SMU1_RAT	Smu1	WD40 repeat-containing protein SMU1	1	DVIGIAHHPHQNLIATYSEDGLLK	DVIGIAHHPHQNLIATYSEDGLLK	3	DVIGIAHHPHQNLIATYSEDGLLK3	1180.16	1608.36	
Q99M63	Q99M63	SMU1_RAT	Smu1	WD40 repeat-containing protein SMU1	1	DVIGIAHHPHQNLIATYSEDGLLK	DVIGIAHHPHQNLIATYSEDGLLK	4	DVIGIAHHPHQNLIATYSEDGLLK4	23130.3	5323.99	3732.07
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	DVIGVLEK	DVIGVLEK	2	DVIGVLEK2	20149	16010.8	17551.3
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	DVIHNSK	DVIHNSK	1	DVIHNSK1			1233.31
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	DVIINQAK	DVIINQAK	2	DVIINQAK2	116247	116346	130510
P24368	P24368	PPIB_RAT	Ppib	Peptidyl-prolyl cis-trans isomerase B	1	DVIIVDCGK	DVIIVDC(UniMod:4)GK	2	DVIIVDC(UniMod:4)GK2	258634	214761	211572
D3ZYT8	D3ZYT8	D3ZYT8_RAT	Pikfyve	1-phosphatidylinositol-3-phosphate 5-kinase	1	DVILCISPVITFR	DVILC(UniMod:4)ISPVITFR	2	DVILC(UniMod:4)ISPVITFR2		7899.92	5653.85
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	DVILFEK	DVILFEK	1	DVILFEK1	25306.7	17939.2	19683.3
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	DVILFEK	DVILFEK	2	DVILFEK2	696972	490609	503169
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	DVINMAWFPEDQR	DVINMAWFPEDQR	2	DVINMAWFPEDQR2	131089	138578	125353
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	DVINMAWFPEDQR	DVINMAWFPEDQR	3	DVINMAWFPEDQR3	44343.2	42322.9	37463.3
Q9R1Q2	Q9R1Q2	CCNL1_RAT	Ccnl1	Cyclin-L1	1	DVINVFHHLR	DVINVFHHLR	3	DVINVFHHLR3	3835.81		
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	DVIPQGAIDELTALVLVNTIYFK	DVIPQGAIDELTALVLVNTIYFK	3	DVIPQGAIDELTALVLVNTIYFK3	3260.82	5451.24	4967.27
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	DVIQAIK	DVIQAIK	2	DVIQAIK2	34889	26737.5	30469.1
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	DVIVIGNDITYR	DVIVIGNDITYR	2	DVIVIGNDITYR2	14679.5	5709.91	8476.05
Q6XUX2	Q6XUX2	DUSTY_RAT	Dstyk	Dual serine/threonine and tyrosine protein kinase	1	DVIVPENGETVGTR	DVIVPENGETVGTR	2	DVIVPENGETVGTR2	7541.93	7484.98	5665.42
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	DVIYSKDLQR	DVIYSKDLQR	2	DVIYSKDLQR2	2396.4	2365.08	2607.52
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	DVKDTILHDNLK	DVKDTILHDNLK	3	DVKDTILHDNLK3	16009.2	11395.3	20166.1
Q62868	Q62868;Q63644	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	0	DVKPDNMLLDK	DVKPDNMLLDK	3	DVKPDNMLLDK3	124424	139563	142750
Q62763	Q62763;Q62761	KC1G3_RAT	Csnk1g3	Casein kinase I isoform gamma-3	0	DVKPENFLIGR	DVKPENFLIGR	2	DVKPENFLIGR2	8640.29	4390.22	4861.51
Q62763	Q62763;Q62761	KC1G3_RAT	Csnk1g3	Casein kinase I isoform gamma-3	0	DVKPENFLIGR	DVKPENFLIGR	3	DVKPENFLIGR3	34446.4	37111.2	37266.8
Q66H84	Q66H84;Q80ZF4	MAPK3_RAT	Mapkapk3	MAP kinase-activated protein kinase 3	0	DVKPENLLYTSK	DVKPENLLYTSK	2	DVKPENLLYTSK2	36799.3	31306.8	41867.3
Q66H84	Q66H84;Q80ZF4	MAPK3_RAT	Mapkapk3	MAP kinase-activated protein kinase 3	0	DVKPENLLYTSK	DVKPENLLYTSK	3	DVKPENLLYTSK3	72640.5	55065.9	47795.8
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	DVKPHNVMIDHEHR	DVKPHNVMIDHEHR	4	DVKPHNVMIDHEHR4	15759	5354.95	17392.7
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	DVKPHNVMIDHEHRK	DVKPHNVMIDHEHRK	2	DVKPHNVMIDHEHRK2	2037.44		1120.09
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	DVKPHNVMIDHEHRK	DVKPHNVMIDHEHRK	3	DVKPHNVMIDHEHRK3	1167.72		10807.4
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	DVKPHNVMIDHEHRK	DVKPHNVMIDHEHRK	4	DVKPHNVMIDHEHRK4	12144.8		16002.3
Q66HF2	Q66HF2	TM9S1_RAT	Tm9sf1	Transmembrane 9 superfamily member 1	1	DVKPHSLDGLR	DVKPHSLDGLR	3	DVKPHSLDGLR3	8171.06	6063.5	4142.08
Q01986	Q01986;P36506	MP2K1_RAT	Map2k1	Dual specificity mitogen-activated protein kinase kinase 1	0	DVKPSNILVNSR	DVKPSNILVNSR	2	DVKPSNILVNSR2	84331.7	65431.3	60586.9
Q01986	Q01986;P36506	MP2K1_RAT	Map2k1	Dual specificity mitogen-activated protein kinase kinase 1	0	DVKPSNILVNSR	DVKPSNILVNSR	3	DVKPSNILVNSR3	169770	159466	168460
M0R7E7	M0R7E7	M0R7E7_RAT	Map2k3	Mitogen activated protein kinase kinase 3	1	DVKPSNVLINK	DVKPSNVLINK	2	DVKPSNVLINK2	8796.87	5683.92	1856.33
M0R7E7	M0R7E7	M0R7E7_RAT	Map2k3	Mitogen activated protein kinase kinase 3	1	DVKPSNVLINK	DVKPSNVLINK	3	DVKPSNVLINK3	25945.4	26558.4	23766
Q925D6	Q925D6	Q925D6_RAT	Map2k6	Mitogen-activated protein kinase kinase 6	1	DVKPSNVLINTLGQVK	DVKPSNVLINTLGQVK	3	DVKPSNVLINTLGQVK3	10685	7016.11	4538.37
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	DVLAEFNEGGSLK	DVLAEFNEGGSLK	2	DVLAEFNEGGSLK2	15194	14412.9	14143
Q68FP9	Q68FP9	COG6_RAT	Cog6	Conserved oligomeric Golgi complex subunit 6	1	DVLASHDSSVVPLDAR	DVLASHDSSVVPLDAR	3	DVLASHDSSVVPLDAR3	32646.9	40862.9	39154
P97711	P97711;Q62833	GRK6_RAT	Grk6	G protein-coupled receptor kinase 6	0	DVLDIEQFSTVK	DVLDIEQFSTVK	2	DVLDIEQFSTVK2	28118.3	24688.8	23804.3
D3ZDZ1	D3ZDZ1	D3ZDZ1_RAT	Apbb1ip	Amyloid beta precursor protein binding family B member 1 interacting protein	1	DVLDNLFEK	DVLDNLFEK	2	DVLDNLFEK2	13449.9	10790.6	8859.77
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	DVLEAIAETAFK	DVLEAIAETAFK	2	DVLEAIAETAFK2	2204.61		4204.12
D4A769	D4A769	D4A769_RAT	Samd4b	Sterile alpha motif domain containing 4B	1	DVLEGGNLR	DVLEGGNLR	2	DVLEGGNLR2		9803.14	5667.16
Q2PQA9	P56536;Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	0	DVLEGYNGTIFAYGQTSSGK	DVLEGYNGTIFAYGQTSSGK	3	DVLEGYNGTIFAYGQTSSGK3	5942.66	9848.37	3655.86
Q6AYG5	Q6AYG5	ECHD1_RAT	Echdc1	Ethylmalonyl-CoA decarboxylase	1	DVLETLWGGPANLEAIAK	DVLETLWGGPANLEAIAK	2	DVLETLWGGPANLEAIAK2	6285.8	4082.18	4130.85
A0A8I5ZQ10	A0A8I5ZQ10	A0A8I5ZQ10_RAT	Naa50	N(alpha)-acetyltransferase 50, NatE catalytic subunit	1	DVLEVGELAK	DVLEVGELAK	2	DVLEVGELAK2	5029.32	4040.81	
D4A104	D4A104	D4A104_RAT	Mrpl45	Mitochondrial ribosomal protein L45	1	DVLEYVVFER	DVLEYVVFER	2	DVLEYVVFER2		5672.61	4190.16
Q6P7C7	Q6P7C7	GPNMB_RAT	Gpnmb	Transmembrane glycoprotein NMB	1	DVLGHEQYPDHMR	DVLGHEQYPDHMR	3	DVLGHEQYPDHMR3	7551.49	8064.78	5503.9
Q6P7C7	Q6P7C7	GPNMB_RAT	Gpnmb	Transmembrane glycoprotein NMB	1	DVLGHEQYPDHMR	DVLGHEQYPDHMR	4	DVLGHEQYPDHMR4	12411.1	8192.87	
Q5I0D1	Q5I0D1	GLOD4_RAT	Glod4	Glyoxalase domain-containing protein 4	1	DVLGMQVLR	DVLGMQVLR	2	DVLGMQVLR2	13478.9	12019.8	15360.9
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	DVLGPSTVVANSEEPQHLTPGK	DVLGPSTVVANSEEPQHLTPGK	3	DVLGPSTVVANSEEPQHLTPGK3			3454.98
Q63450	Q63450	KCC1A_RAT	Camk1	Calcium/calmodulin-dependent protein kinase type 1	1	DVLGTGAFSEVILAEDKR	DVLGTGAFSEVILAEDKR	3	DVLGTGAFSEVILAEDKR3	739.976	2196.84	
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	DVLIPGK	DVLIPGK	1	DVLIPGK1	17732.1	13663.8	11847.7
D4AC93	D4AC93	D4AC93_RAT	Tmem223	Transmembrane protein 223	1	DVLLFEHER	DVLLFEHER	3	DVLLFEHER3	3735.89		5147.05
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	DVLLPWYNAYR	DVLLPWYNAYR	2	DVLLPWYNAYR2	27130.5	21869.6	27853.5
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DVLLQVEDER	DVLLQVEDER	2	DVLLQVEDER2	95011.9	73691.9	2.26781e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DVLLQVEDERR	DVLLQVEDERR	2	DVLLQVEDERR2	197231	203449	168877
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	DVLLQVEDERR	DVLLQVEDERR	3	DVLLQVEDERR3	2.39296e+07	2.81598e+07	2.59313e+07
Q9Z244	Q9Z244;Q5FVP6	GMPR1_RAT	Gmpr	GMP reductase 1	0	DVLLRPK	DVLLRPK	2	DVLLRPK2	211296	177853	193588
Q4KLJ8	Q4KLJ8	PDCL3_RAT	Pdcl3	Phosducin-like protein 3	1	DVLLSSVR	DVLLSSVR	2	DVLLSSVR2	82668.9	83641.9	81901.9
Q4KLJ8	Q4KLJ8	PDCL3_RAT	Pdcl3	Phosducin-like protein 3	1	DVLLSSVRDPVPMR	DVLLSSVRDPVPMR	3	DVLLSSVRDPVPMR3	147495	151010	136375
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	DVLLVAQGEMALEEFLK	DVLLVAQGEMALEEFLK	3	DVLLVAQGEMALEEFLK3		8762.75	6579.74
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	DVLNDTAPR	DVLNDTAPR	2	DVLNDTAPR2	53169.9	47294.8	57010.2
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	DVLNEDVR	DVLNEDVR	2	DVLNEDVR2	109737	102645	120013
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	DVLPNNR	DVLPNNR	2	DVLPNNR2	105691	122886	111836
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	DVLPSCAIR	DVLPSC(UniMod:4)AIR	2	DVLPSC(UniMod:4)AIR2	380745	345426	374513
A0A8I5ZS69	A0A8I5ZS69	A0A8I5ZS69_RAT	Snx6	Sorting nexin	1	DVLQAETSQQLCCQK	DVLQAETSQQLC(UniMod:4)C(UniMod:4)QK	2	DVLQAETSQQLC(UniMod:4)C(UniMod:4)QK2	7710.22	9388.14	3723.1
A0A8I5ZS69	A0A8I5ZS69	A0A8I5ZS69_RAT	Snx6	Sorting nexin	1	DVLQAETSQQLCCQK	DVLQAETSQQLC(UniMod:4)C(UniMod:4)QK	3	DVLQAETSQQLC(UniMod:4)C(UniMod:4)QK3	10386.1	7609.7	7920.2
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	DVLQGELEAVK	DVLQGELEAVK	2	DVLQGELEAVK2	55945	65576.6	54412.9
D3ZFJ3	D3ZFJ3	3BP1_RAT	Sh3bp1	SH3 domain-binding protein 1	1	DVLQPLNR	DVLQPLNR	2	DVLQPLNR2	38338.5	30113.9	46202.8
P63245	P63245	RACK1_RAT	Rack1	Small ribosomal subunit protein RACK1	1	DVLSVAFSSDNR	DVLSVAFSSDNR	2	DVLSVAFSSDNR2	16711.3	20427.9	10119.5
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	DVLSYHIPFLVSSIEDFKDHIPR	DVLSYHIPFLVSSIEDFKDHIPR	4	DVLSYHIPFLVSSIEDFKDHIPR4	10341.3	7895.83	1961.59
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	DVLTGHEFNVR	DVLTGHEFNVR	2	DVLTGHEFNVR2	19952.2	15936.9	14043.4
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	DVLTGHEFNVR	DVLTGHEFNVR	3	DVLTGHEFNVR3	200724	179060	176543
P20760	P20759;P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	0	DVLTITLTPK	DVLTITLTPK	2	DVLTITLTPK2	5.30478e+06	4.8955e+06	4.48601e+06
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	DVLTTWGDTFFSIVTGGEGK	DVLTTWGDTFFSIVTGGEGK	3	DVLTTWGDTFFSIVTGGEGK3		15967.3	15126.5
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	DVLVNGDSK	DVLVNGDSK	2	DVLVNGDSK2	16381.4	12619.4	11861.8
Q63483	Q63483	Q63483_RAT	Rab38	Ras-related protein Rab	1	DVLVNNGLK	DVLVNNGLK	2	DVLVNNGLK2	70833.7		57059.1
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	DVLYLSAIR	DVLYLSAIR	2	DVLYLSAIR2	36679.2	47119.9	44639.3
A0A8I6AE36	A0A8I6AE36;Q9QYU1	A0A8I6AE36_RAT	ENSRNOG00000067472	Peroxisomal biogenesis factor 19	0	DVLYPSLK	DVLYPSLK	2	DVLYPSLK2	45435.2	40873	49907
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	DVMDFIK	DVMDFIK	1	DVMDFIK1	2058.81		
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	DVMDFIK	DVMDFIK	2	DVMDFIK2	33705.2	31371.9	32807.9
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	DVMEDVVEDR	DVMEDVVEDR	2	DVMEDVVEDR2	387282	326956	323179
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	DVMEDVVEDRLDR	DVMEDVVEDRLDR	2	DVMEDVVEDRLDR2	4870.19		2490.29
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	DVMEDVVEDRLDR	DVMEDVVEDRLDR	3	DVMEDVVEDRLDR3	428463	425137	445250
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	DVMEDVVEDRLDRK	DVMEDVVEDRLDRK	3	DVMEDVVEDRLDRK3	61833	81659.8	88745.6
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	DVMEDVVEDRLDRK	DVMEDVVEDRLDRK	4	DVMEDVVEDRLDRK4	4041.41	12442.5	12784.4
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	DVMPEVNK	DVMPEVNK	2	DVMPEVNK2	37702.9	31493.7	
Q5XIF6	Q5XIF6	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	1	DVNAAIAAIK	DVNAAIAAIK	2	DVNAAIAAIK2	131493	139152	119267
Q5XIF6	Q5XIF6	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	1	DVNAAIAAIKTK	DVNAAIAAIKTK	2	DVNAAIAAIKTK2	1366.91	3243.35	
Q5XIF6	Q5XIF6	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	1	DVNAAIAAIKTK	DVNAAIAAIKTK	3	DVNAAIAAIKTK3	2713.83	1217.37	
Q6AYZ1	A0A8I6AF82;P68370;Q68FR8;Q6AYZ1;Q6P9V9	TBA1C_RAT	Tuba1c	Tubulin alpha-1C chain	0	DVNAAIATIK	DVNAAIATIK	2	DVNAAIATIK2	9.91071e+06	1.01083e+07	1.14312e+07
F7EMB2	F7EMB2	F7EMB2_RAT	Rtraf	RNA transcription, translation and transport factor protein	1	DVNCPFK	DVNC(UniMod:4)PFK	2	DVNC(UniMod:4)PFK2	24425	18279.4	25283.4
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	DVNECLTIPEACK	DVNEC(UniMod:4)LTIPEAC(UniMod:4)K	2	DVNEC(UniMod:4)LTIPEAC(UniMod:4)K2	889819	797640	843629
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	DVNECLTIPEACK	DVNEC(UniMod:4)LTIPEAC(UniMod:4)K	3	DVNEC(UniMod:4)LTIPEAC(UniMod:4)K3	73309.6	67415	63479.7
A0A0G2JSI4	A0A0G2JSI4	A0A0G2JSI4_RAT	Adgre5	Adhesion G protein-coupled receptor E5	1	DVNECTSGQNQCHQSTHCINK	DVNEC(UniMod:4)TSGQNQC(UniMod:4)HQSTHC(UniMod:4)INK	3	DVNEC(UniMod:4)TSGQNQC(UniMod:4)HQSTHC(UniMod:4)INK3	7941.8		8866.04
A0A0G2JSI4	A0A0G2JSI4	A0A0G2JSI4_RAT	Adgre5	Adhesion G protein-coupled receptor E5	1	DVNECTSGQNQCHQSTHCINK	DVNEC(UniMod:4)TSGQNQC(UniMod:4)HQSTHC(UniMod:4)INK	4	DVNEC(UniMod:4)TSGQNQC(UniMod:4)HQSTHC(UniMod:4)INK4	5950.84		5143.11
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	DVNERPPQPQASIPLR	DVNERPPQPQASIPLR	3	DVNERPPQPQASIPLR3	131484	166766	119381
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	DVNGSPLSHATSFK	DVNGSPLSHATSFK	3	DVNGSPLSHATSFK3	17213.7	18291.3	27457.8
D3ZHZ3	D3ZHZ3	D3ZHZ3_RAT	Osbpl3	Oxysterol-binding protein	1	DVNHFFPGSSVTDSAPGVFESVSSR	DVNHFFPGSSVTDSAPGVFESVSSR	3	DVNHFFPGSSVTDSAPGVFESVSSR3	11171.3	14715.3	10708.1
F1MA10	F1MA10	F1MA10_RAT	Art4	NAD(P)(+)--arginine ADP-ribosyltransferase	1	DVNIEANVGSTVR	DVNIEANVGSTVR	2	DVNIEANVGSTVR2			3186.63
Q63369	Q63369	NFKB1_RAT	Nfkb1	Nuclear factor NF-kappa-B p105 subunit	1	DVNITKPASVFVQLR	DVNITKPASVFVQLR	3	DVNITKPASVFVQLR3	3516	5833.19	10359.8
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	DVNNHSMTAIR	DVNNHSMTAIR	2	DVNNHSMTAIR2	2779.25	2476.96	2339.78
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	DVNNHSMTAIR	DVNNHSMTAIR	3	DVNNHSMTAIR3	25012.2	29023.7	25694.3
P17074	D3ZGN8;P17074;A0A8I6ARG7	RS19_RAT	Rps19	Small ribosomal subunit protein eS19	0	DVNQQEFVR	DVNQQEFVR	2	DVNQQEFVR2	16431.1	13163.7	19215.7
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	DVNTCCPQEAAVR	DVNTC(UniMod:4)C(UniMod:4)PQEAAVR	2	DVNTC(UniMod:4)C(UniMod:4)PQEAAVR2	8765.7	7104.49	5636.26
Q6AY56	Q6AY56	TBA8_RAT	Tuba8	Tubulin alpha-8 chain	1	DVNVAIAAIK	DVNVAIAAIK	2	DVNVAIAAIK2	1.00162e+06	994708	911449
P83868	P83868;Q5PQL9	TEBP_RAT	Ptges3	Prostaglandin E synthase 3	0	DVNVNFEK	DVNVNFEK	1	DVNVNFEK1	6224.23	9692.56	15439.3
P83868	P83868;Q5PQL9	TEBP_RAT	Ptges3	Prostaglandin E synthase 3	0	DVNVNFEK	DVNVNFEK	2	DVNVNFEK2	889568	863092	888519
P00159	P00159	CYB_RAT	Mt-Cyb	Cytochrome b	1	DVNYGWLIR	DVNYGWLIR	2	DVNYGWLIR2	14348.3	10299.4	12406.6
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	DVPAFLQQSQSSGPGQAAVWHR	DVPAFLQQSQSSGPGQAAVWHR	3	DVPAFLQQSQSSGPGQAAVWHR3	98128.6	84966.3	82870.5
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	DVPAPSSVNK	DVPAPSSVNK	2	DVPAPSSVNK2	71915.8	70136.3	79379.8
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	DVPASEK	DVPASEK	1	DVPASEK1			4758.17
P97521	P97521	MCAT_RAT	Slc25a20	Mitochondrial carnitine/acylcarnitine carrier protein	1	DVPASGMYFMTYEWLK	DVPASGMYFMTYEWLK	2	DVPASGMYFMTYEWLK2	38371.5	40743.5	53092.7
P97521	P97521	MCAT_RAT	Slc25a20	Mitochondrial carnitine/acylcarnitine carrier protein	1	DVPASGMYFMTYEWLK	DVPASGMYFMTYEWLK	3	DVPASGMYFMTYEWLK3	5559.22	4540.52	9126.37
O70595	O70595	ABCB6_RAT	Abcb6	ATP-binding cassette sub-family B member 6	1	DVPGAGPLR	DVPGAGPLR	2	DVPGAGPLR2	24158.2	18625.6	36125.2
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	DVPIDHSDLVADLLK	DVPIDHSDLVADLLK	3	DVPIDHSDLVADLLK3	11600.1	18245.5	10450.9
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	DVPIVHTETK	DVPIVHTETK	2	DVPIVHTETK2	179291	161251	154612
P08461	P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	1	DVPLGTPLCIIVEK	DVPLGTPLC(UniMod:4)IIVEK	2	DVPLGTPLC(UniMod:4)IIVEK2	115149	119672	131937
P08461	P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	1	DVPLGTPLCIIVEK	DVPLGTPLC(UniMod:4)IIVEK	3	DVPLGTPLC(UniMod:4)IIVEK3	3393.5	1154.29	
P31211	P31211	CBG_RAT	Serpina6	Corticosteroid-binding globulin	1	DVPLTLTMVHK	DVPLTLTMVHK	2	DVPLTLTMVHK2	439084	374691	292729
P31211	P31211	CBG_RAT	Serpina6	Corticosteroid-binding globulin	1	DVPLTLTMVHK	DVPLTLTMVHK	3	DVPLTLTMVHK3	980316	707301	765770
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	DVPNETLQVEEDDRPELPWWK	DVPNETLQVEEDDRPELPWWK	3	DVPNETLQVEEDDRPELPWWK3	36200.6	26465.7	20741
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	DVPPWENTSLR	DVPPWENTSLR	2	DVPPWENTSLR2	88571.7	93658.3	69067.8
O35568	O35568	FBLN3_RAT	Efemp1	EGF-containing fibulin-like extracellular matrix protein 1	1	DVPQSIVYK	DVPQSIVYK	2	DVPQSIVYK2	93172.4	60309.3	73656.9
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	DVPTGGIFQLR	DVPTGGIFQLR	2	DVPTGGIFQLR2	62950.4	94882.2	64147.8
A0A8I5ZMG6	A0A8I5ZMG6	A0A8I5ZMG6_RAT	Ppp2r5e	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	DVPTSEQPELFLK	DVPTSEQPELFLK	2	DVPTSEQPELFLK2	3040.53	6743.05	4929.28
A0A8I5ZMG6	A0A8I5ZMG6	A0A8I5ZMG6_RAT	Ppp2r5e	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	DVPTSEQPELFLKK	DVPTSEQPELFLKK	3	DVPTSEQPELFLKK3	11727.8	5527.36	6155.17
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	DVPVEALTTVKPYCNEIHAQAQLWLK	DVPVEALTTVKPYC(UniMod:4)NEIHAQAQLWLK	4	DVPVEALTTVKPYC(UniMod:4)NEIHAQAQLWLK4	5797.03	14337.5	10280.9
P08461	P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	1	DVPVGSIICITVEKPQDIEAFK	DVPVGSIIC(UniMod:4)ITVEKPQDIEAFK	3	DVPVGSIIC(UniMod:4)ITVEKPQDIEAFK3	33854.9	34960.7	27489
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	DVPVVAILGSGGGFR	DVPVVAILGSGGGFR	2	DVPVVAILGSGGGFR2	34839.7	45166.2	36108.3
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	DVPVVAILGSGGGFR	DVPVVAILGSGGGFR	3	DVPVVAILGSGGGFR3	9294.97	12869.9	13294.5
A0A8I5ZNC2	A0A8I5ZNC2	A0A8I5ZNC2_RAT	Tmed8	Transmembrane p24 trafficking protein family member 8	1	DVQAGSHDYPGEGIYLLK	DVQAGSHDYPGEGIYLLK	3	DVQAGSHDYPGEGIYLLK3	10649.2		7984.06
Q1EHB3	Q1EHB3	ATS7_RAT	Adamts7	A disintegrin and metalloproteinase with thrombospondin motifs 7	1	DVQCVDTR	DVQC(UniMod:4)VDTR	2	DVQC(UniMod:4)VDTR2	14410.4	8955.35	14701.3
B2GUZ5	B2GUZ5	CAZA1_RAT	Capza1	F-actin-capping protein subunit alpha-1	1	DVQDSVTVSNEVQTAK	DVQDSVTVSNEVQTAK	2	DVQDSVTVSNEVQTAK2	67720.3	73124.2	91102.4
B2GUZ5	B2GUZ5	CAZA1_RAT	Capza1	F-actin-capping protein subunit alpha-1	1	DVQDSVTVSNEVQTAK	DVQDSVTVSNEVQTAK	3	DVQDSVTVSNEVQTAK3	19284.2	22846	28324.3
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	DVQDVFSFR	DVQDVFSFR	2	DVQDVFSFR2	45351.5	43959	41755.4
Q6AYB5	Q6AYB5	SRP54_RAT	Srp54	Signal recognition particle subunit SRP54	1	DVQELLTQYTK	DVQELLTQYTK	2	DVQELLTQYTK2	3040.11	6010.91	2993.49
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	DVQELYAAGENR	DVQELYAAGENR	2	DVQELYAAGENR2	155186	154123	136192
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	DVQELYAAGENR	DVQELYAAGENR	3	DVQELYAAGENR3	5584.45	4776.58	
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	DVQFAVEQVLQEEHFDAR	DVQFAVEQVLQEEHFDAR	3	DVQFAVEQVLQEEHFDAR3	42883.4	41773	35919.2
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	DVQFAVEQVLQEEHFDARR	DVQFAVEQVLQEEHFDARR	4	DVQFAVEQVLQEEHFDARR4	4049.49	10511.8	10925
Q4KLL4	Q4KLL4	TM9S4_RAT	Tm9sf4	Transmembrane 9 superfamily member 4	1	DVQFEHGYR	DVQFEHGYR	2	DVQFEHGYR2	15386.6	9300.03	19724.4
Q4KLL4	Q4KLL4	TM9S4_RAT	Tm9sf4	Transmembrane 9 superfamily member 4	1	DVQFEHGYR	DVQFEHGYR	3	DVQFEHGYR3	23093.2	20196.1	32475.9
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	DVQHVIVR	DVQHVIVR	2	DVQHVIVR2	53112.3	42645.9	47171.6
P62282	P62282;A0A8I6AKU9	RS11_RAT	Rps11	Small ribosomal subunit protein uS17	0	DVQIGDIVTVGECRPLSK	DVQIGDIVTVGEC(UniMod:4)RPLSK	3	DVQIGDIVTVGEC(UniMod:4)RPLSK3	24393.7	26890.8	26618.7
O55171	O55171	ACOT2_RAT	Acot2	Acyl-coenzyme A thioesterase 2, mitochondrial	1	DVQKPYVVELEVLDGHEPDGGQR	DVQKPYVVELEVLDGHEPDGGQR	4	DVQKPYVVELEVLDGHEPDGGQR4	9801.08	5091.81	20048.7
Q8CIZ5	F1LVL9;Q8CIZ5	DMBT1_RAT	Dmbt1	Deleted in malignant brain tumors 1 protein	0	DVQLEGGCNYDYIEIFDGPHHSSPLIAR	DVQLEGGC(UniMod:4)NYDYIEIFDGPHHSSPLIAR	4	DVQLEGGC(UniMod:4)NYDYIEIFDGPHHSSPLIAR4	673755	884706	670105
Q63692	Q63692	CDC37_RAT	Cdc37	Hsp90 co-chaperone Cdc37	1	DVQMLQDAISK	DVQMLQDAISK	2	DVQMLQDAISK2	59016	77579.4	80237.4
A0A8I5ZX10	P01681;A0A8I5ZX10	A0A8I5ZX10_RAT	ENSRNOG00000063329	Ig-like domain-containing protein	0	DVQMTQSPSYLAASPGESVSISCK	DVQMTQSPSYLAASPGESVSISC(UniMod:4)K	3	DVQMTQSPSYLAASPGESVSISC(UniMod:4)K3	182474	182188	195375
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	DVQNFPAATDEK	DVQNFPAATDEK	2	DVQNFPAATDEK2	46014.7	45000.8	39792.4
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	DVQNFPAATDEKDK	DVQNFPAATDEKDK	2	DVQNFPAATDEKDK2	18134.3	15249.4	16158.5
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	DVQNFPAATDEKDK	DVQNFPAATDEKDK	3	DVQNFPAATDEKDK3	59333.1	62290.4	68270.8
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	DVQNFPAATDEKDKFVEK	DVQNFPAATDEKDKFVEK	3	DVQNFPAATDEKDKFVEK3	28729.9	25714.1	14362.1
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	DVQNVNFLLK	DVQNVNFLLK	2	DVQNVNFLLK2	13635.1	13824	18666.6
D4A7F0	D4A7F0	D4A7F0_RAT	Ubr3	E3 ubiquitin-protein ligase	1	DVQSAMDR	DVQSAMDR	2	DVQSAMDR2	10258.1	14283.9	11065.7
Q4FZT0	Q4FZT0	STML2_RAT	Stoml2	Stomatin-like protein 2, mitochondrial	1	DVQTTDTSIEELGR	DVQTTDTSIEELGR	2	DVQTTDTSIEELGR2	5735.68	2734.53	6199.09
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	DVRDQLIDMK	DVRDQLIDMK	2	DVRDQLIDMK2	1.68633e+06	2.10987e+06	2.22356e+06
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	DVRDQLIDMK	DVRDQLIDMK	3	DVRDQLIDMK3	5.74187e+06	7.42157e+06	8.8377e+06
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	DVRDQLIDMKR	DVRDQLIDMKR	3	DVRDQLIDMKR3	22288.8	31796	34731.8
P18422	P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	1	DVREEAEK	DVREEAEK	1	DVREEAEK1			22873.7
P18422	P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	1	DVREEAEK	DVREEAEK	2	DVREEAEK2			312621
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	DVSALESEGSK	DVSALESEGSK	2	DVSALESEGSK2	34218.3	36567.1	30323.9
P52303	P52303	AP1B1_RAT	Ap1b1	AP-1 complex subunit beta-1	1	DVSALFPDVVNCMQTDNLELK	DVSALFPDVVNC(UniMod:4)MQTDNLELK	3	DVSALFPDVVNC(UniMod:4)MQTDNLELK3		5002.36	8884.68
P52303	P52303	AP1B1_RAT	Ap1b1	AP-1 complex subunit beta-1	1	DVSALFPDVVNCMQTDNLELKK	DVSALFPDVVNC(UniMod:4)MQTDNLELKK	3	DVSALFPDVVNC(UniMod:4)MQTDNLELKK3	78803.8	97856.3	81137
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	DVSDEDVAR	DVSDEDVAR	2	DVSDEDVAR2	37758.8	33957	40418.4
Q8VHF5	Q8VHF5	CISY_RAT	Cs	Citrate synthase, mitochondrial	1	DVSDEKLR	DVSDEKLR	2	DVSDEKLR2	8599.34	15811.2	6573.77
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	DVSELTGFPEMLGGR	DVSELTGFPEMLGGR	2	DVSELTGFPEMLGGR2	28274.6	24295.3	23282.5
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	DVSETHFVHC	DVSETHFVHC(UniMod:4)	2	DVSETHFVHC(UniMod:4)2	1.71642e+06	1.90931e+06	1.68042e+06
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	DVSETHFVHC	DVSETHFVHC(UniMod:4)	3	DVSETHFVHC(UniMod:4)3	7.70978e+06	8.73906e+06	8.8736e+06
A0A0G2K516	A0A0G2K516	A0A0G2K516_RAT	Stx11	Syntaxin 11	1	DVSGEQIEDMFEQGK	DVSGEQIEDMFEQGK	2	DVSGEQIEDMFEQGK2	164210	141333	161519
A0A0G2K516	A0A0G2K516	A0A0G2K516_RAT	Stx11	Syntaxin 11	1	DVSGEQIEDMFEQGK	DVSGEQIEDMFEQGK	3	DVSGEQIEDMFEQGK3	5823.63	3526.35	8620.41
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	DVSGFSDPYCLLGIEQK	DVSGFSDPYC(UniMod:4)LLGIEQK	2	DVSGFSDPYC(UniMod:4)LLGIEQK2	40087	28830	29037.4
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	DVSGFSDPYCLLGIEQK	DVSGFSDPYC(UniMod:4)LLGIEQK	3	DVSGFSDPYC(UniMod:4)LLGIEQK3	3298.8	10492.4	6704.13
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	DVSGPKPGPLK	DVSGPKPGPLK	2	DVSGPKPGPLK2	19773.3	8548.46	15667.3
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	DVSITNMTTSFR	DVSITNMTTSFR	2	DVSITNMTTSFR2	8947.31	16165.4	8014.6
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	DVSLKSPK	DVSLKSPK	2	DVSLKSPK2	34111.4	43086.3	36287
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	DVSLSSLR	DVSLSSLR	2	DVSLSSLR2	27961.5		
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	DVSPFDHSR	DVSPFDHSR	2	DVSPFDHSR2	34548.7	18162.4	32910.4
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	DVSPSPETETAK	DVSPSPETETAK	2	DVSPSPETETAK2	57545.6	56592	66435.8
Q63054	Q63054	ICA69_RAT	Ica1	Islet cell autoantigen 1	1	DVSQELDPDLYK	DVSQELDPDLYK	2	DVSQELDPDLYK2	5250.11	7630.07	
P62944	P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	DVSSLFPDVVNCMQTDNLELK	DVSSLFPDVVNC(UniMod:4)MQTDNLELK	3	DVSSLFPDVVNC(UniMod:4)MQTDNLELK3	5600.84	3802.48	664.157
P62944	P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	DVSSLFPDVVNCMQTDNLELKK	DVSSLFPDVVNC(UniMod:4)MQTDNLELKK	3	DVSSLFPDVVNC(UniMod:4)MQTDNLELKK3	31930.8	48625.7	35926.7
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	DVSSVELLLK	DVSSVELLLK	2	DVSSVELLLK2	66973.6	78221.5	82505.9
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	DVSSVELLMNNHQGIK	DVSSVELLMNNHQGIK	2	DVSSVELLMNNHQGIK2	34845.9	32599.4	35089.4
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	DVSSVELLMNNHQGIK	DVSSVELLMNNHQGIK	3	DVSSVELLMNNHQGIK3	571887	691202	670395
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	DVSTTLNADEAVAR	DVSTTLNADEAVAR	2	DVSTTLNADEAVAR2	31328.1	27383.8	31237.9
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	DVSTTLNADEAVAR	DVSTTLNADEAVAR	3	DVSTTLNADEAVAR3		3973.54	2115.49
P56522	P56522	ADRO_RAT	Fdxr	NADPH:adrenodoxin oxidoreductase, mitochondrial	1	DVSVPELR	DVSVPELR	2	DVSVPELR2	12858.9	7874.92	12979.3
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	DVSVPVAEIK	DVSVPVAEIK	2	DVSVPVAEIK2	253372	255711	258162
Q5M9G8	Q5M9G8	DCA11_RAT	Dcaf11	DDB1- and CUL4-associated factor 11	1	DVSWHPFEEK	DVSWHPFEEK	2	DVSWHPFEEK2	1341.14	6677.69	5027.64
Q5M9G8	Q5M9G8	DCA11_RAT	Dcaf11	DDB1- and CUL4-associated factor 11	1	DVSWHPFEEK	DVSWHPFEEK	3	DVSWHPFEEK3	20484.7	17353.8	15569.4
A1L1K3	A1L1K3	APC5_RAT	Anapc5	Anaphase-promoting complex subunit 5	1	DVSYFQAR	DVSYFQAR	2	DVSYFQAR2	19519.9	17082.9	
Q9EPB1	Q9EPB1	DPP2_RAT	Dpp7	Dipeptidyl peptidase 2	1	DVTADFYGQSPK	DVTADFYGQSPK	2	DVTADFYGQSPK2	8537.31	9133.45	12112.2
Q9JJM9	Q9JJM9	SEPT5_RAT	Septin5	Septin-5	1	DVTCDVHYENYR	DVTC(UniMod:4)DVHYENYR	2	DVTC(UniMod:4)DVHYENYR2	9141.23		10445.7
Q9JJM9	Q9JJM9	SEPT5_RAT	Septin5	Septin-5	1	DVTCDVHYENYR	DVTC(UniMod:4)DVHYENYR	3	DVTC(UniMod:4)DVHYENYR3	64922.2	56208.4	53858.2
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	DVTDEDLNSYFK	DVTDEDLNSYFK	2	DVTDEDLNSYFK2	17807.5	9777.86	17791.4
F1LRE5	F1LRE5	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	1	DVTFNLK	DVTFNLK	2	DVTFNLK2		35099.5	37564.1
P0C5H9	P0C5H9	MANF_RAT	Manf	Mesencephalic astrocyte-derived neurotrophic factor	1	DVTFSPATIEEELIK	DVTFSPATIEEELIK	2	DVTFSPATIEEELIK2	17415	10741.5	10878.1
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	DVTGAEALLER	DVTGAEALLER	2	DVTGAEALLER2	651541	689128	744053
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	DVTHSIIFEVK	DVTHSIIFEVK	3	DVTHSIIFEVK3	16311.6	24125.9	17604.2
P56932	P56932;P36877;P97888	2ABD_RAT	Ppp2r2d	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform	0	DVTLEASR	DVTLEASR	2	DVTLEASR2	12400.6	14945.9	13151.6
P50123	Q641X1;P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	0	DVTLLAR	DVTLLAR	2	DVTLLAR2	45058.6	45695.8	
Q9WVC0	Q9WVC0;A0A8I6ARI4	SEPT7_RAT	Septin7	Septin-7	0	DVTNNVHYENYR	DVTNNVHYENYR	2	DVTNNVHYENYR2	10339.3	4648.47	3855.68
Q9WVC0	Q9WVC0;A0A8I6ARI4	SEPT7_RAT	Septin7	Septin-7	0	DVTNNVHYENYR	DVTNNVHYENYR	3	DVTNNVHYENYR3	159151	159965	163711
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	DVTQQQFK	DVTQQQFK	2	DVTQQQFK2	28096.2	26509.7	19863.2
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	DVTSAINLCASSALELLR	DVTSAINLC(UniMod:4)ASSALELLR	2	DVTSAINLC(UniMod:4)ASSALELLR2	9637.6	1743.82	9077.4
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	DVTSAINLCASSALELLR	DVTSAINLC(UniMod:4)ASSALELLR	3	DVTSAINLC(UniMod:4)ASSALELLR3	1313.45	2291.24	2579.52
Q62848	Q62848	ARFG1_RAT	Arfgap1	ADP-ribosylation factor GTPase-activating protein 1	1	DVTTFFSGK	DVTTFFSGK	2	DVTTFFSGK2	96986.6	94840	91511.1
Q63615	Q63615	VP33A_RAT	Vps33a	Vacuolar protein sorting-associated protein 33A	1	DVTTSEDFFDK	DVTTSEDFFDK	2	DVTTSEDFFDK2	8761.51	10018.1	8604.89
A0A0G2JSI4	A0A0G2JSI4	A0A0G2JSI4_RAT	Adgre5	Adhesion G protein-coupled receptor E5	1	DVTTVHHSQAWMQLDWAVTAGAK	DVTTVHHSQAWMQLDWAVTAGAK	3	DVTTVHHSQAWMQLDWAVTAGAK3	18288	8715.9	13584.6
A0A0G2JSI4	A0A0G2JSI4	A0A0G2JSI4_RAT	Adgre5	Adhesion G protein-coupled receptor E5	1	DVTTVHHSQAWMQLDWAVTAGAK	DVTTVHHSQAWMQLDWAVTAGAK	4	DVTTVHHSQAWMQLDWAVTAGAK4	28254.1	23273.5	28464.2
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	DVTVVSK	DVTVVSK	1	DVTVVSK1	2967.19	613.899	1703.95
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	DVTYEEAK	DVTYEEAK	1	DVTYEEAK1	1588.09	1543.86	2978.7
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	DVTYEEAK	DVTYEEAK	2	DVTYEEAK2	337925	316146	335266
A0A8I5ZTB8	A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	DVTYICPFTGAVR	DVTYIC(UniMod:4)PFTGAVR	2	DVTYIC(UniMod:4)PFTGAVR2	17078.8	20237.5	18385.2
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	DVVAEVEWFGAK	DVVAEVEWFGAK	2	DVVAEVEWFGAK2	74707.6	82849.5	57934.2
D4A6K4	D4A6K4	D4A6K4_RAT	Golga1	Golgin A1	1	DVVAGQEAQIQK	DVVAGQEAQIQK	2	DVVAGQEAQIQK2	5828.01	7954.74	3176.54
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	DVVASLHLDGSK	DVVASLHLDGSK	2	DVVASLHLDGSK2	11926.5	11596.2	
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	DVVASLHLDGSK	DVVASLHLDGSK	3	DVVASLHLDGSK3	15829.2	19205.6	16220.5
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	DVVASLVSTR	DVVASLVSTR	2	DVVASLVSTR2	175177	185551	170762
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	DVVCYLSLMETGRPQDK	DVVC(UniMod:4)YLSLMETGRPQDK	3	DVVC(UniMod:4)YLSLMETGRPQDK3	37436.6	46444.9	43962.9
Q71RP1	Q71RP1	HPSE_RAT	Hpse	Heparanase	1	DVVDLEFYTK	DVVDLEFYTK	2	DVVDLEFYTK2	44553.2	39070.5	32322.7
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	DVVDYIIFGTVIQEVK	DVVDYIIFGTVIQEVK	2	DVVDYIIFGTVIQEVK2	70565.4		
F1LUU1	F1LUU1	F1LUU1_RAT	Itga11	Integrin subunit alpha 11	1	DVVEAASHIEQR	DVVEAASHIEQR	3	DVVEAASHIEQR3	23576.7	19097.8	20390.1
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	DVVELTDDTFDK	DVVELTDDTFDK	2	DVVELTDDTFDK2	494966	538085	509357
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	DVVENGEVAGQTLSLMEQLR	DVVENGEVAGQTLSLMEQLR	3	DVVENGEVAGQTLSLMEQLR3			7917.41
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	DVVEPLLRPQWYVR	DVVEPLLRPQWYVR	3	DVVEPLLRPQWYVR3	99584.7	97411	105169
A0A0G2K2G7	A0A0G2K2G7	A0A0G2K2G7_RAT	Anks1a	Ankyrin repeat and sterile alpha motif domain containing 1A	1	DVVEVLLR	DVVEVLLR	2	DVVEVLLR2	3259.8	4759.15	2724.9
F7EYK0	F7EYK0	F7EYK0_RAT	Fkbp5	peptidylprolyl isomerase	1	DVVFVIGEGEDHDIPIGIDK	DVVFVIGEGEDHDIPIGIDK	3	DVVFVIGEGEDHDIPIGIDK3	7309.94		3149.48
Q5FWU0	Q5FWU0	Q5FWU0_RAT	Wasf2	Wiskott-Aldrich syndrome protein family member	1	DVVGNDVATILSR	DVVGNDVATILSR	2	DVVGNDVATILSR2	50871.1	66768.1	58877.6
Q5FWU0	Q5FWU0	Q5FWU0_RAT	Wasf2	Wiskott-Aldrich syndrome protein family member	1	DVVGNDVATILSR	DVVGNDVATILSR	3	DVVGNDVATILSR3	7681.2	5204.9	4897.17
Q5I0H9	Q5I0H9	PDIA5_RAT	Pdia5	Protein disulfide-isomerase A5	1	DVVHIDSEKDFR	DVVHIDSEKDFR	3	DVVHIDSEKDFR3	13141.2	5872.63	10792.1
O88767	O88767	PARK7_RAT	Park7	Parkinson disease protein 7 homolog	1	DVVICPDTSLEEAK	DVVIC(UniMod:4)PDTSLEEAK	2	DVVIC(UniMod:4)PDTSLEEAK2	34057.1	34767.1	39872.5
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	DVVILGR	DVVILGR	2	DVVILGR2	48736.1	55428.7	60516.2
D4A0G7	D4A0G7	D4A0G7_RAT	Rab37	RAB37, member RAS oncogene family	1	DVVIMLLGNK	DVVIMLLGNK	2	DVVIMLLGNK2	42367	47074.4	37097.3
P05696	P68403;P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	0	DVVIQDDDVECTMVEK	DVVIQDDDVEC(UniMod:4)TMVEK	2	DVVIQDDDVEC(UniMod:4)TMVEK2	33466.4	25646.1	36366
P05696	P68403;P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	0	DVVIQDDDVECTMVEK	DVVIQDDDVEC(UniMod:4)TMVEK	3	DVVIQDDDVEC(UniMod:4)TMVEK3		5206.79	6271.5
P05696	P68403;P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	0	DVVIQDDDVECTMVEKR	DVVIQDDDVEC(UniMod:4)TMVEKR	3	DVVIQDDDVEC(UniMod:4)TMVEKR3	9939.07	9461.29	5320.47
P18422	P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	1	DVVKEVAK	DVVKEVAK	2	DVVKEVAK2	10151.9	12734	12440.2
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	DVVLIGEQAR	DVVLIGEQAR	2	DVVLIGEQAR2	124224	182401	176585
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	DVVLMDDDVECTMVEK	DVVLMDDDVEC(UniMod:4)TMVEK	2	DVVLMDDDVEC(UniMod:4)TMVEK2	10401.8	7506.09	7474.43
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	DVVLSDSFGTSIVPFQK	DVVLSDSFGTSIVPFQK	2	DVVLSDSFGTSIVPFQK2	36831.5	30676.5	30495.7
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	DVVMMENFHHIFATLSR	DVVMMENFHHIFATLSR	3	DVVMMENFHHIFATLSR3	40078.4	33716.1	21205.4
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	DVVMMENFHHIFATLSR	DVVMMENFHHIFATLSR	4	DVVMMENFHHIFATLSR4	10173	9577	8746.49
Q9WV63	Q9WV63;A0A8I6A456	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	0	DVVMVHEPK	DVVMVHEPK	2	DVVMVHEPK2	195723	193061	171201
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	DVVNCVGGMGALLPLLER	DVVNC(UniMod:4)VGGMGALLPLLER	2	DVVNC(UniMod:4)VGGMGALLPLLER2	52315.9	61141.2	81294
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	DVVNCVGGMGALLPLLER	DVVNC(UniMod:4)VGGMGALLPLLER	3	DVVNC(UniMod:4)VGGMGALLPLLER3	32697.6	31751.1	32598.5
P53534	P53534	PYGB_RAT	Pygb	Glycogen phosphorylase, brain form (Fragment)	1	DVVNMLMYHDR	DVVNMLMYHDR	3	DVVNMLMYHDR3	6380.7	4578.91	2822.32
Q924S1	Q924S1	PLCD_RAT	Agpat4	1-acyl-sn-glycerol-3-phosphate acyltransferase delta	1	DVVPAVYDCTLNFR	DVVPAVYDC(UniMod:4)TLNFR	2	DVVPAVYDC(UniMod:4)TLNFR2	9964.45	9624.98	10019.2
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	DVVTKPDCNCLYPK	DVVTKPDC(UniMod:4)NC(UniMod:4)LYPK	2	DVVTKPDC(UniMod:4)NC(UniMod:4)LYPK2	11259.8	12967	10878.8
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	DVVTKPDCNCLYPK	DVVTKPDC(UniMod:4)NC(UniMod:4)LYPK	3	DVVTKPDC(UniMod:4)NC(UniMod:4)LYPK3	87837.3	81224.3	88464.7
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	DVVTLPETK	DVVTLPETK	2	DVVTLPETK2	88206.9	54399.5	65096.4
Q63525	Q63525	NUDC_RAT	Nudc	Nuclear migration protein nudC	1	DVVVDIQR	DVVVDIQR	2	DVVVDIQR2	66142.8	35841.9	45106.9
Q5XI78	Q5XI78;D3ZQD3	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	0	DVVVDLVCYR	DVVVDLVC(UniMod:4)YR	2	DVVVDLVC(UniMod:4)YR2	158861	140596	157173
A0A0G2K8Q7	A0A0G2K375;A0A0G2K8Q7	A0A0G2K8Q7_RAT	Lsm2	U6 snRNA-associated Sm-like protein LSm2	0	DVVVELK	DVVVELK	2	DVVVELK2	24598.7		18967.7
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	DVVVGHR	DVVVGHR	2	DVVVGHR2	26661.5	28660.9	
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	DVVVNVDYSK	DVVVNVDYSK	2	DVVVNVDYSK2	20693.1	30999.9	22375.1
Q6AXV4	Q6AXV4	SAM50_RAT	Samm50	Sorting and assembly machinery component 50 homolog	1	DVVVQHVHFDGLER	DVVVQHVHFDGLER	2	DVVVQHVHFDGLER2	4110.76	1631.76	3474.55
Q6AXV4	Q6AXV4	SAM50_RAT	Samm50	Sorting and assembly machinery component 50 homolog	1	DVVVQHVHFDGLER	DVVVQHVHFDGLER	3	DVVVQHVHFDGLER3	47817.3	62053.4	62241.9
Q6AXV4	Q6AXV4	SAM50_RAT	Samm50	Sorting and assembly machinery component 50 homolog	1	DVVVQHVHFDGLER	DVVVQHVHFDGLER	4	DVVVQHVHFDGLER4	24667.4	26782.1	37989.6
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	DVVVTINDHK	DVVVTINDHK	2	DVVVTINDHK2	22484.7	24892.1	23755.6
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	DVVVTINDHK	DVVVTINDHK	3	DVVVTINDHK3	71154.3	55184.9	64773.8
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	DVVVTINDHKR	DVVVTINDHKR	3	DVVVTINDHKR3	31386.5	44185.6	49414.3
D3ZQQ1	D3ZQQ1	D3ZQQ1_RAT	Aftph	Aftiphilin	1	DVWAELQDIHDAHGLR	DVWAELQDIHDAHGLR	3	DVWAELQDIHDAHGLR3	8273.7		3607.71
D3ZQQ1	D3ZQQ1	D3ZQQ1_RAT	Aftph	Aftiphilin	1	DVWAELQDIHDAHGLR	DVWAELQDIHDAHGLR	4	DVWAELQDIHDAHGLR4	4109.16	4701.42	
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	DVWAELR	DVWAELR	2	DVWAELR2	66518.4	47151.4	75763.4
Q62740	Q62740	SPP24_RAT	Spp2	Secreted phosphoprotein 24	1	DVWAHCR	DVWAHC(UniMod:4)R	2	DVWAHC(UniMod:4)R2	560405	539752	628249
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	DVWDYVFFK	DVWDYVFFK	2	DVWDYVFFK2	12706	15106.5	11587.4
Q62844	Q62844	FYN_RAT	Fyn	Tyrosine-protein kinase Fyn	1	DVWEIPR	DVWEIPR	2	DVWEIPR2	33539.7	28042.9	35691.4
D3Z841	D3Z841	D3Z841_RAT	Btnl10	Butyrophilin like 10	1	DVYDEQMTEYK	DVYDEQMTEYK	2	DVYDEQMTEYK2	4353.18		3246.88
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	DVYEKNPQMGDPGSLQPK	DVYEKNPQMGDPGSLQPK	3	DVYEKNPQMGDPGSLQPK3		153608	
A0A8I6ASK1	A0A8I6ASK1	A0A8I6ASK1_RAT	P4ha2	procollagen-proline 4-dioxygenase	1	DVYESLCR	DVYESLC(UniMod:4)R	2	DVYESLC(UniMod:4)R2	9871.9	17800.5	15559.8
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	DVYHPVCPLGQCK	DVYHPVC(UniMod:4)PLGQC(UniMod:4)K	2	DVYHPVC(UniMod:4)PLGQC(UniMod:4)K2	59598	59074.8	50698.7
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	DVYHPVCPLGQCK	DVYHPVC(UniMod:4)PLGQC(UniMod:4)K	3	DVYHPVC(UniMod:4)PLGQC(UniMod:4)K3	237600	262686	247226
P63086	P21708;P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	0	DVYIVQDLMETDLYK	DVYIVQDLMETDLYK	2	DVYIVQDLMETDLYK2	100182	90128.1	79039.5
P63086	P21708;P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	0	DVYIVQDLMETDLYK	DVYIVQDLMETDLYK	3	DVYIVQDLMETDLYK3	12002.4	21334.4	18371.4
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	DVYLSLLR	DVYLSLLR	2	DVYLSLLR2	7043.24	2942.65	4640.5
D3ZML4	D3ZML4	D3ZML4_RAT	Trabd	TraB domain containing	1	DVYLTYMLR	DVYLTYMLR	2	DVYLTYMLR2	5375.35	7048.07	6033.41
P23377	P23377	FURIN_RAT	Furin	Furin	1	DVYQEPTDPK	DVYQEPTDPK	2	DVYQEPTDPK2	3442.8	5242.6	3520.08
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	DVYRYVRETGLMAFTNLK	DVYRYVRETGLMAFTNLK	4	DVYRYVRETGLMAFTNLK4	12549.4	9026.61	8961.25
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	DVYSILQAEGILLPR	DVYSILQAEGILLPR	2	DVYSILQAEGILLPR2	1124.43	944.686	3521.92
P18421	P18421	PSB1_RAT	Psmb1	Proteasome subunit beta type-1	1	DVYTGDALR	DVYTGDALR	2	DVYTGDALR2	4.06832e+06	3.85928e+06	4.06947e+06
Q6P7C7	Q6P7C7	GPNMB_RAT	Gpnmb	Transmembrane glycoprotein NMB	1	DVYVITDQIPIFVTMYQK	DVYVITDQIPIFVTMYQK	3	DVYVITDQIPIFVTMYQK3	2445.25	2499.7	1828.12
Q2LC84	Q2LC84	NUMB_RAT	Numb	Protein numb homolog	1	DVYVPEASRPHQWQTDEEGVR	DVYVPEASRPHQWQTDEEGVR	3	DVYVPEASRPHQWQTDEEGVR3	9715.55		3023
Q2LC84	Q2LC84	NUMB_RAT	Numb	Protein numb homolog	1	DVYVPEASRPHQWQTDEEGVR	DVYVPEASRPHQWQTDEEGVR	4	DVYVPEASRPHQWQTDEEGVR4	17441.1	8889.49	14270.4
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	DVYVPNTTYR	DVYVPNTTYR	2	DVYVPNTTYR2	65511.2	47695.3	63260.4
Q62733	Q62733	LAP2_RAT	Tmpo	Lamina-associated polypeptide 2, isoform beta	1	DVYVQLYLQHLTAR	DVYVQLYLQHLTAR	3	DVYVQLYLQHLTAR3		2677.68	
D3ZP13	D3ZP13	D3ZP13_RAT	Qsox2	Sulfhydryl oxidase	1	DWAAAIR	DWAAAIR	2	DWAAAIR2	28751.4	24926.3	32804.5
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	DWAEATLMTQK	DWAEATLMTQK	2	DWAEATLMTQK2	352602	371571	280605
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	DWAEATLMTQK	DWAEATLMTQK	3	DWAEATLMTQK3	1.94157e+06	2.01298e+06	2.2999e+06
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	DWAEATLMTQKTGIVSGFGR	DWAEATLMTQKTGIVSGFGR	3	DWAEATLMTQKTGIVSGFGR3	6840.13	7303.68	1124.7
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	DWAKPGPYDQPLVNTLQR	DWAKPGPYDQPLVNTLQR	3	DWAKPGPYDQPLVNTLQR3	61140.8	66434.3	66585.3
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	DWALNSAAVVMEER	DWALNSAAVVMEER	2	DWALNSAAVVMEER2	7509.4	10354.8	13282.1
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	DWALNSAAVVMEER	DWALNSAAVVMEER	3	DWALNSAAVVMEER3	3819.44	677.241	
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	DWCWELER	DWC(UniMod:4)WELER	2	DWC(UniMod:4)WELER2	25531.6	41439.4	30799.3
O35094	O35094	TIM44_RAT	Timm44	Mitochondrial import inner membrane translocase subunit TIM44	1	DWCYEATYNQLAHSIQQAK	DWC(UniMod:4)YEATYNQLAHSIQQAK	3	DWC(UniMod:4)YEATYNQLAHSIQQAK3	14423.7	16685	10670.3
Q9WTS8	Q9WTS8	FCN1_RAT	Fcn1	Ficolin-1	1	DWDSYKR	DWDSYKR	2	DWDSYKR2	20353.7	13571.2	15816.3
A0A8I5ZS02	A0A8I5ZS02	A0A8I5ZS02_RAT	Ptges3l	Prostaglandin E synthase 3 like	1	DWEGDDEMELAQVEHYAELLNK	DWEGDDEMELAQVEHYAELLNK	3	DWEGDDEMELAQVEHYAELLNK3	3081.88	10866	
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	DWEYIQDPR	DWEYIQDPR	2	DWEYIQDPR2	169741	180378	181097
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	DWFRDEMQK	DWFRDEMQK	3	DWFRDEMQK3	48216	59824.2	64263
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	DWHGVPGK	DWHGVPGK	1	DWHGVPGK1	3.3759e+06	3.78066e+06	3.34178e+06
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	DWHGVPGK	DWHGVPGK	2	DWHGVPGK2	135419	126788	85512.1
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	DWHGVPGKVDAAMAGR	DWHGVPGKVDAAMAGR	2	DWHGVPGKVDAAMAGR2	12860.7	13906.2	17508.1
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	DWHGVPGKVDAAMAGR	DWHGVPGKVDAAMAGR	3	DWHGVPGKVDAAMAGR3	82525	91059.9	130749
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	DWHGVPGKVDAAMAGR	DWHGVPGKVDAAMAGR	4	DWHGVPGKVDAAMAGR4	186376	252832	286632
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	DWHGVPGKVDAAMAGRIYITGSTFR	DWHGVPGKVDAAMAGRIYITGSTFR	3	DWHGVPGKVDAAMAGRIYITGSTFR3	18912.1	25581.1	16784.1
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	DWHGVPGKVDAAMAGRIYITGSTFR	DWHGVPGKVDAAMAGRIYITGSTFR	4	DWHGVPGKVDAAMAGRIYITGSTFR4	136485	143838	118294
P58751	P58751	RELN_RAT	Reln	Reelin	1	DWHPVTEECVPPTIGCVHYTESSTYTSER	DWHPVTEEC(UniMod:4)VPPTIGC(UniMod:4)VHYTESSTYTSER	4	DWHPVTEEC(UniMod:4)VPPTIGC(UniMod:4)VHYTESSTYTSER4		2426.11	
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	DWIDILTK	DWIDILTK	2	DWIDILTK2	425599	438137	385690
O35783	O35783	CALU_RAT	Calu	Calumenin	1	DWILPSDYDHAEAEAR	DWILPSDYDHAEAEAR	2	DWILPSDYDHAEAEAR2	198376	248123	222619
O35783	O35783	CALU_RAT	Calu	Calumenin	1	DWILPSDYDHAEAEAR	DWILPSDYDHAEAEAR	3	DWILPSDYDHAEAEAR3	2.25875e+06	2.57867e+06	2.59644e+06
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	DWINAAFR	DWINAAFR	2	DWINAAFR2	44047.4	45462.7	24994.6
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	DWIQNTLGVNLEHK	DWIQNTLGVNLEHK	3	DWIQNTLGVNLEHK3	3708.09	2027.01	1501.05
A0A0G2JXT6	A0A0G2JXT6;A0A8I6AEZ2	MTMR6_RAT	Mtmr6	Myotubularin-related protein 6	0	DWISFGHK	DWISFGHK	2	DWISFGHK2	32539.6	35714.2	38491.2
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	DWLFAPHYR	DWLFAPHYR	2	DWLFAPHYR2	40555.4	38714.3	33451.3
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	DWLFAPHYR	DWLFAPHYR	3	DWLFAPHYR3	52996.1	49738	57214
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	DWLSTLEPR	DWLSTLEPR	2	DWLSTLEPR2	41916.9	39321.9	42113.9
A0A8I5ZK89	A0A8I5ZK89	A0A8I5ZK89_RAT	Dock5	Dedicator of cytokinesis 5	1	DWMVMNMTQSR	DWMVMNMTQSR	2	DWMVMNMTQSR2		3324.11	
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	DWNIFSK	DWNIFSK	1	DWNIFSK1	10681.9	13501.7	6749.4
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	DWNIFSK	DWNIFSK	2	DWNIFSK2	85570.8	98320.8	86687.4
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	DWNTLIVGK	DWNTLIVGK	2	DWNTLIVGK2	64088.2	58752.7	72215.8
P50399	P50398;P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	0	DWNVDLIPK	DWNVDLIPK	2	DWNVDLIPK2	25516.5	16409.6	13971.4
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	DWPHESPMAVEALVK	DWPHESPMAVEALVK	2	DWPHESPMAVEALVK2	3141.17	13105.3	14280.3
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	DWPHESPMAVEALVK	DWPHESPMAVEALVK	3	DWPHESPMAVEALVK3	13441.7	18018.7	16315.1
O35547	O35547	ACSL4_RAT	Acsl4	Long-chain-fatty-acid--CoA ligase 4	1	DWQEGGYTVHDKPNPR	DWQEGGYTVHDKPNPR	3	DWQEGGYTVHDKPNPR3	9425.72	2927.73	11158.6
O35547	O35547	ACSL4_RAT	Acsl4	Long-chain-fatty-acid--CoA ligase 4	1	DWQEGGYTVHDKPNPR	DWQEGGYTVHDKPNPR	4	DWQEGGYTVHDKPNPR4	7568.62	6964.63	16981.5
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	DWQPHISPAGTEPAYIEYK	DWQPHISPAGTEPAYIEYK	3	DWQPHISPAGTEPAYIEYK3	17446.8	23483.8	19078.7
Q9QZA6	Q9QZA6	CD151_RAT	Cd151	CD151 antigen	1	DWRDSEWIR	DWRDSEWIR	3	DWRDSEWIR3		5401.81	
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	DWRPALNLAVLDCADETNSAVCR	DWRPALNLAVLDC(UniMod:4)ADETNSAVC(UniMod:4)R	3	DWRPALNLAVLDC(UniMod:4)ADETNSAVC(UniMod:4)R3	6634.2	8958.29	9108.48
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	DWSDEPIKECK	DWSDEPIKEC(UniMod:4)K	2	DWSDEPIKEC(UniMod:4)K2	5757.09		6125.67
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	DWSDEPIKECK	DWSDEPIKEC(UniMod:4)K	3	DWSDEPIKEC(UniMod:4)K3	68265	92753.8	78691.7
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	DWSFPYEYNYGLQGGMSFLDKR	DWSFPYEYNYGLQGGMSFLDKR	3	DWSFPYEYNYGLQGGMSFLDKR3	8082.09	5698.2	
P07151	P07151	B2MG_RAT	B2m	Beta-2-microglobulin	1	DWSFYILAHTEFTPTETDVYACR	DWSFYILAHTEFTPTETDVYAC(UniMod:4)R	3	DWSFYILAHTEFTPTETDVYAC(UniMod:4)R3	90720.8	72266.4	73742.9
B1WC18	B1WC18	B1WC18_RAT	Podxl2	Podocalyxin-like 2	1	DWSNLAGK	DWSNLAGK	2	DWSNLAGK2	18387.5	18121.6	20382.8
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	DWSPTLYIR	DWSPTLYIR	2	DWSPTLYIR2	300916	343666	341960
G3V904	G3V904	G3V904_RAT	Pld4	Phospholipase D family, member 4	1	DWSSHYAMGLDR	DWSSHYAMGLDR	3	DWSSHYAMGLDR3	5229.62	7488.57	4583.79
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	DWTAHREEIAR	DWTAHREEIAR	3	DWTAHREEIAR3	19697.4	19926.8	15959.1
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	DWTDDDRAR	DWTDDDRAR	2	DWTDDDRAR2	4792.46		3054.27
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	DWTDDDRAR	DWTDDDRAR	3	DWTDDDRAR3	52867.7	65895.2	73456.8
A0A8I5Y5Z6	A0A8I5Y5Z6	A0A8I5Y5Z6_RAT	Xrcc4	X-ray repair cross complementing 4	1	DWTDVQGR	DWTDVQGR	2	DWTDVQGR2	7418.22	10693.9	
D4A3E8	D4A3E8	D4A3E8_RAT	Mrps27	Mitochondrial ribosomal protein S27	1	DWTIHTWIR	DWTIHTWIR	3	DWTIHTWIR3	6416.71	4075.83	4448.19
Q496Z0	Q496Z0	ELP2_RAT	Elp2	Elongator complex protein 2	1	DWTSCVETTPSQSHTLGIR	DWTSC(UniMod:4)VETTPSQSHTLGIR	3	DWTSC(UniMod:4)VETTPSQSHTLGIR3	9307.77	10810.3	6516.32
P10888	P10888	COX41_RAT	Cox4i1	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial	1	DWVAMQTK	DWVAMQTK	2	DWVAMQTK2	29917.6	23908.6	20069.4
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	DWVCALGLVPGHPILLSGCR	DWVC(UniMod:4)ALGLVPGHPILLSGC(UniMod:4)R	3	DWVC(UniMod:4)ALGLVPGHPILLSGC(UniMod:4)R3	36043.4	31917.4	33992.9
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	DWVEALNQASK	DWVEALNQASK	2	DWVEALNQASK2	99982.2	96384	88340.3
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	DWVIPPINCPENQK	DWVIPPINC(UniMod:4)PENQK	2	DWVIPPINC(UniMod:4)PENQK2	1.27367e+06	1.33989e+06	1.43791e+06
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	DWVIPPINCPENQK	DWVIPPINC(UniMod:4)PENQK	3	DWVIPPINC(UniMod:4)PENQK3	77089.8	64270.7	80091.8
Q9Z1Y3	Q9Z1Y3	CADH2_RAT	Cdh2	Cadherin-2	1	DWVIPPINLPENSR	DWVIPPINLPENSR	2	DWVIPPINLPENSR2	42945.3	51355.4	43738
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	DWVQETMAK	DWVQETMAK	2	DWVQETMAK2	839646	691316	749150
B2RYN1	B2RYN1	B2RYN1_RAT	Fn3krp	protein-ribulosamine 3-kinase	1	DWVTFYAR	DWVTFYAR	2	DWVTFYAR2	5674.18	11041.4	7509.42
A1L1K3	A1L1K3	APC5_RAT	Anapc5	Anaphase-promoting complex subunit 5	1	DWVTPYK	DWVTPYK	2	DWVTPYK2	14493.7	16651.3	11075.4
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	DWVVVDYGTR	DWVVVDYGTR	2	DWVVVDYGTR2	40835.9	46811.6	39647.6
P51111	P51111	HD_RAT	Htt	Huntingtin	1	DWYLQLVR	DWYLQLVR	2	DWYLQLVR2	5931.31	1743.09	9534.42
A0A8J8Y8E0	A0A8J8Y8E0	A0A8J8Y8E0_RAT	Fibp	FGF1 intracellular binding protein	1	DYAAIVFFANNR	DYAAIVFFANNR	2	DYAAIVFFANNR2	5462.07	6074.84	3961.12
D4ADD7	D4ADD7	D4ADD7_RAT	Glrx5	Glutaredoxin 5	1	DYAAYNVLEDPELR	DYAAYNVLEDPELR	2	DYAAYNVLEDPELR2	29156.5	22065.6	22898.6
D4ADD7	D4ADD7	D4ADD7_RAT	Glrx5	Glutaredoxin 5	1	DYAAYNVLEDPELR	DYAAYNVLEDPELR	3	DYAAYNVLEDPELR3	7839.98	12948.3	10419.8
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	DYADFVNLSTNLVGMDK	DYADFVNLSTNLVGMDK	2	DYADFVNLSTNLVGMDK2	3654.91	4431.22	3338.37
B0BN19	B0BN19	B0BN19_RAT	Rab22a	RAB22A, member RAS oncogene family	1	DYADSIHAIFVETSAK	DYADSIHAIFVETSAK	3	DYADSIHAIFVETSAK3		19158.4	16667.9
Q7TP47	Q7TP47	HNRPQ_RAT	Syncrip	Heterogeneous nuclear ribonucleoprotein Q	1	DYAFIHFDER	DYAFIHFDER	3	DYAFIHFDER3	6953.27	8296.77	11903.9
A0A8I5ZQ92;Q566E4	Q566E4;A0A8I5ZQ92	A0A8I5ZQ92_RAT;Q566E4_RAT	Hnrnpr;Hnrnpr-ps2	Heterogeneous nuclear ribonucleoprotein R-like	0	DYAFVHFEDR	DYAFVHFEDR	3	DYAFVHFEDR3	3197.5	2161.79	
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	DYANTLFICR	DYANTLFIC(UniMod:4)R	2	DYANTLFIC(UniMod:4)R2	33177.3	39408.2	35039.6
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	DYAQLGPR	DYAQLGPR	2	DYAQLGPR2	26495.3	22406.1	20399.4
B0BN85	B0BN85	SGT1_RAT	Sugt1	Protein SGT1 homolog	1	DYASALETFAEGQK	DYASALETFAEGQK	2	DYASALETFAEGQK2			8414.19
P08460	P08460	NID1_RAT	Nid1	Nidogen-1 (Fragment)	1	DYATGFCCR	DYATGFC(UniMod:4)C(UniMod:4)R	2	DYATGFC(UniMod:4)C(UniMod:4)R2	570521	583098	557964
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	DYAYGEADPLIR	DYAYGEADPLIR	2	DYAYGEADPLIR2	12784.2	12907.2	12873.8
D3ZLT1	D3ZLT1	D3ZLT1_RAT	Ndufb7	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7	1	DYCAHYLIR	DYC(UniMod:4)AHYLIR	2	DYC(UniMod:4)AHYLIR2	11467.3	5621.34	8096.65
D3ZLT1	D3ZLT1	D3ZLT1_RAT	Ndufb7	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7	1	DYCAHYLIR	DYC(UniMod:4)AHYLIR	3	DYC(UniMod:4)AHYLIR3	49899	69825.6	63976.6
D4A3I5	D4A3I5	D4A3I5_RAT	Fhip2a	FHF complex subunit HOOK interacting protein 2A	1	DYCAVCLR	DYC(UniMod:4)AVC(UniMod:4)LR	2	DYC(UniMod:4)AVC(UniMod:4)LR2	13108.8	11344.8	15295.7
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	DYDAMGSQTK	DYDAMGSQTK	2	DYDAMGSQTK2	60169.9	38978.5	51821.7
P61980	A0A8I5ZZG4;P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	DYDDMSPR	DYDDMSPR	2	DYDDMSPR2	116102	99402.9	111092
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	DYDGWTPLHAAAHWGK	DYDGWTPLHAAAHWGK	2	DYDGWTPLHAAAHWGK2	818.406	2487.85	3721.14
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	DYDGWTPLHAAAHWGK	DYDGWTPLHAAAHWGK	3	DYDGWTPLHAAAHWGK3	43988.6	35627.2	37636.5
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	DYDGWTPLHAAAHWGK	DYDGWTPLHAAAHWGK	4	DYDGWTPLHAAAHWGK4	90273.3	81591.5	76217.3
Q5U316	Q5U316	RAB35_RAT	Rab35	Ras-related protein Rab-35	1	DYDHLFK	DYDHLFK	2	DYDHLFK2	21144.5	14312.2	37624.7
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	DYDPMHGDVIK	DYDPMHGDVIK	2	DYDPMHGDVIK2	103814	141829	119576
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	DYDPMHGDVIK	DYDPMHGDVIK	3	DYDPMHGDVIK3	112590	91928.9	95219.8
Q8K3P7	Q8K3P7	HINT3_RAT	Hint3	Adenosine 5'-monophosphoramidase HINT3	1	DYDSNCVFCR	DYDSNC(UniMod:4)VFC(UniMod:4)R	2	DYDSNC(UniMod:4)VFC(UniMod:4)R2	14514.4	12598.1	9964.15
D3ZYW7	D3ZYW7	FRDA_RAT	Fxn	Frataxin, mitochondrial	1	DYDVSFGDGVLTIK	DYDVSFGDGVLTIK	2	DYDVSFGDGVLTIK2	5732.34	12693.9	4760.42
Q5XIT9	Q5XIT9	MCCB_RAT	Mccc2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	1	DYEAEGIAK	DYEAEGIAK	2	DYEAEGIAK2	27113.2	21071.2	22785
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	DYEAGQLYGLEK	DYEAGQLYGLEK	2	DYEAGQLYGLEK2	12685.2	10897	17151.2
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	DYEDLREDMR	DYEDLREDMR	2	DYEDLREDMR2	19453.5	26526.2	21162.9
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	DYEDLREDMR	DYEDLREDMR	3	DYEDLREDMR3	63644.8	62768.6	75640.5
Q4V7C7	Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	1	DYEEIGPSICR	DYEEIGPSIC(UniMod:4)R	2	DYEEIGPSIC(UniMod:4)R2	188748	156803	183782
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	DYEGPAISPK	DYEGPAISPK	2	DYEGPAISPK2	44084.9	40699.5	41828
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	DYEGQQK	DYEGQQK	1	DYEGQQK1			1.07044e+06
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	DYEGQQK	DYEGQQK	2	DYEGQQK2			1.02886e+07
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	DYEHQFHLR	DYEHQFHLR	3	DYEHQFHLR3	7158.85	4943	3381
A0A0G2JVT8	A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	1	DYEIEVWSPQK	DYEIEVWSPQK	2	DYEIEVWSPQK2	5265.57	6375.88	15567.1
P30427	P30427	PLEC_RAT	Plec	Plectin	1	DYELQLITYK	DYELQLITYK	2	DYELQLITYK2	7455.96	8042.44	
A0A8I6A5X2	A0A8I6A5X2	A0A8I6A5X2_RAT	Usp32	ubiquitinyl hydrolase 1	1	DYEMVPEPVWR	DYEMVPEPVWR	2	DYEMVPEPVWR2	12736.7	22369.2	19564.8
P53042	P53042	PPP5_RAT	Ppp5c	Serine/threonine-protein phosphatase 5	1	DYENAIK	DYENAIK	2	DYENAIK2	7572.36	9065.44	
Q5U1Z2	Q5U1Z2	TPPC3_RAT	Trappc3	Trafficking protein particle complex subunit 3	1	DYENDEDVNK	DYENDEDVNK	2	DYENDEDVNK2	38071.6	27959.2	29468.2
Q9WU61	Q9WU61	CLCC1_RAT	Clcc1	Chloride channel CLIC-like protein 1	1	DYESQSNPVFR	DYESQSNPVFR	2	DYESQSNPVFR2	6024.18	3606.6	3229.62
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	DYESSQGEIR	DYESSQGEIR	2	DYESSQGEIR2	36432.2	29652.8	34289.6
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	DYETATLSDIK	DYETATLSDIK	2	DYETATLSDIK2	105431	102246	96906.5
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	DYETATLSEIK	DYETATLSEIK	2	DYETATLSEIK2	4.63281e+06	5.33244e+06	5.18599e+06
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	DYETATLSEIK	DYETATLSEIK	3	DYETATLSEIK3	29572	24443.9	34643.4
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	DYETHFELEHNNR	DYETHFELEHNNR	3	DYETHFELEHNNR3	23042	23531.9	7101.71
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	DYETHFELEHNNR	DYETHFELEHNNR	4	DYETHFELEHNNR4	21415.1	12578.7	12054.3
P53042	P53042	PPP5_RAT	Ppp5c	Serine/threonine-protein phosphatase 5	1	DYETVVK	DYETVVK	2	DYETVVK2	6920.68		8617.49
P02466	P02466	CO1A2_RAT	Col1a2	Collagen alpha-2(I) chain	1	DYEVDATLK	DYEVDATLK	2	DYEVDATLK2	6607.74	8210.21	7629.11
P53534	P53534	PYGB_RAT	Pygb	Glycogen phosphorylase, brain form (Fragment)	1	DYFFALAHTVR	DYFFALAHTVR	3	DYFFALAHTVR3	7134.07	12752.9	10475.6
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	DYFGAHTYELLSK	DYFGAHTYELLSK	3	DYFGAHTYELLSK3	74692.5	60520	73251.6
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	DYFGLIFQEHPEQK	DYFGLIFQEHPEQK	3	DYFGLIFQEHPEQK3	2832.94		
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	DYFISCPGR	DYFISC(UniMod:4)PGR	2	DYFISC(UniMod:4)PGR2	3.61496e+06	3.92699e+06	4.19249e+06
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	DYFIVTCK	DYFIVTC(UniMod:4)K	2	DYFIVTC(UniMod:4)K2	829637	583228	526516
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	DYFLEFEGDPHCLR	DYFLEFEGDPHC(UniMod:4)LR	2	DYFLEFEGDPHC(UniMod:4)LR2	16145	11147.2	16890.8
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	DYFLEFEGDPHCLR	DYFLEFEGDPHC(UniMod:4)LR	3	DYFLEFEGDPHC(UniMod:4)LR3	35424.6	31694.6	46281.1
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	DYFNVPYPLPK	DYFNVPYPLPK	2	DYFNVPYPLPK2	31297.9	31042.2	31778.1
D3ZYT8	D3ZYT8	D3ZYT8_RAT	Pikfyve	1-phosphatidylinositol-3-phosphate 5-kinase	1	DYFPEQIYWSPLLNK	DYFPEQIYWSPLLNK	2	DYFPEQIYWSPLLNK2	3607.58	3866.07	2674.39
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	DYFSNPGNFER	DYFSNPGNFER	2	DYFSNPGNFER2	62627.9	58333.2	50488.2
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	DYFVPQLYGFLK	DYFVPQLYGFLK	2	DYFVPQLYGFLK2	14929.6	18524.9	19841.7
Q9R0C5	Q9R0C5	GALT7_RAT	Galnt7	N-acetylgalactosaminyltransferase 7	1	DYFYASRPESK	DYFYASRPESK	3	DYFYASRPESK3	10876.9	7389.42	7957.26
Q32PX2	Q32PX2	AIMP2_RAT	Aimp2	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2	1	DYGALKDIVINANPASPPLSLLVLHR	DYGALKDIVINANPASPPLSLLVLHR	4	DYGALKDIVINANPASPPLSLLVLHR4	3713.28	11760	7716.24
A0A096MJF9	A0A096MJF9	A0A096MJF9_RAT	Tmem132e	Transmembrane protein 132E	1	DYGLLVNSLDER	DYGLLVNSLDER	2	DYGLLVNSLDER2	19741.9	21900.1	12883.9
G3V8G1	G3V8G1	G3V8G1_RAT	Agtpbp1	tubulin-glutamate carboxypeptidase	1	DYGLPLTVLSCTK	DYGLPLTVLSC(UniMod:4)TK	2	DYGLPLTVLSC(UniMod:4)TK2		10852	4996.37
Q00438	Q00438	PTBP1_RAT	Ptbp1	Polypyrimidine tract-binding protein 1	1	DYGSSPLHR	DYGSSPLHR	2	DYGSSPLHR2	19919.7	12775.3	17911.8
Q9Z0V6	Q9Z0V6	PRDX3_RAT	Prdx3	Thioredoxin-dependent peroxide reductase, mitochondrial	1	DYGVLLESAGIALR	DYGVLLESAGIALR	2	DYGVLLESAGIALR2	355726	259995	300344
Q9Z0V6	Q9Z0V6	PRDX3_RAT	Prdx3	Thioredoxin-dependent peroxide reductase, mitochondrial	1	DYGVLLESAGIALR	DYGVLLESAGIALR	3	DYGVLLESAGIALR3	19897.2	10906.6	15997.9
Q9Z0V5	Q9Z0V5	PRDX4_RAT	Prdx4	Peroxiredoxin-4	1	DYGVYLEDSGHTLR	DYGVYLEDSGHTLR	2	DYGVYLEDSGHTLR2	26771.8	24380.2	20462.4
Q9Z0V5	Q9Z0V5	PRDX4_RAT	Prdx4	Peroxiredoxin-4	1	DYGVYLEDSGHTLR	DYGVYLEDSGHTLR	3	DYGVYLEDSGHTLR3	85279.1	80262.4	91184.6
M0R6S5	M0R6S5	M0R6S5_RAT	Chsy3	Hexosyltransferase	1	DYGYGITCIYK	DYGYGITC(UniMod:4)IYK	2	DYGYGITC(UniMod:4)IYK2	3996.84	1869.28	
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	DYHFVTSR	DYHFVTSR	2	DYHFVTSR2	9744.37	9497.85	
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	DYHIGIPLTYTQYK	DYHIGIPLTYTQYK	3	DYHIGIPLTYTQYK3	10955.5	13457.1	13769.5
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	DYHLEYSEGESLFYVVSPR	DYHLEYSEGESLFYVVSPR	3	DYHLEYSEGESLFYVVSPR3		2845.06	
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	DYHNTSMALEGVPELLHK	DYHNTSMALEGVPELLHK	3	DYHNTSMALEGVPELLHK3	14599.3	15708.4	27312.5
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	DYHNTSMALEGVPELLHK	DYHNTSMALEGVPELLHK	4	DYHNTSMALEGVPELLHK4	19926.2	33861	21643.7
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	DYHQQFR	DYHQQFR	2	DYHQQFR2	7713.46	4708.25	5662.09
P97711	P97711	GRK6_RAT	Grk6	G protein-coupled receptor kinase 6	1	DYHSLCER	DYHSLC(UniMod:4)ER	2	DYHSLC(UniMod:4)ER2	4425.37	5738.17	3783.29
P15978	P16391;A0A0G2K1E1;A0A0G2K4S5;A0A8J8XB15;P15978	HA11_RAT	RT1-Aw2	Class I histocompatibility antigen, Non-RT1.A alpha-1 chain	0	DYIALNEDLK	DYIALNEDLK	2	DYIALNEDLK2	423797	412944	374847
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	DYIDEAEK	DYIDEAEK	2	DYIDEAEK2	25059		27162.3
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	DYIEEEVTDEK	DYIEEEVTDEK	2	DYIEEEVTDEK2	34461.5	46263.9	48549.2
P48548	P48548	KCNJ5_RAT	Kcnj5	G protein-activated inward rectifier potassium channel 4	1	DYIPIATDR	DYIPIATDR	2	DYIPIATDR2	174105	157717	150307
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	DYIPVDQEELR	DYIPVDQEELR	2	DYIPVDQEELR2	239544	199570	247871
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	DYIPVDQEELRDYVK	DYIPVDQEELRDYVK	2	DYIPVDQEELRDYVK2	18028	18688	11884.2
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	DYIPVDQEELRDYVK	DYIPVDQEELRDYVK	3	DYIPVDQEELRDYVK3	147823	213634	161930
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	DYIQESENIASLHNQITACDAVLER	DYIQESENIASLHNQITAC(UniMod:4)DAVLER	3	DYIQESENIASLHNQITAC(UniMod:4)DAVLER3	4033.72	8587.87	8039.87
E9PT66	E9PT66	E9PT66_RAT	Sf3b3	Splicing factor 3b, subunit 3	1	DYIVVGSDSGR	DYIVVGSDSGR	2	DYIVVGSDSGR2	3206.19	3998.1	7421.4
Q8VHF5	Q8VHF5	CISY_RAT	Cs	Citrate synthase, mitochondrial	1	DYIWNTLNSGR	DYIWNTLNSGR	2	DYIWNTLNSGR2	164099	120317	156888
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	DYKEQNEACVQTYK	DYKEQNEAC(UniMod:4)VQTYK	2	DYKEQNEAC(UniMod:4)VQTYK2	8973.55	5804.38	6190.46
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	DYKEQNEACVQTYK	DYKEQNEAC(UniMod:4)VQTYK	3	DYKEQNEAC(UniMod:4)VQTYK3	38093.3	50936.8	48332.2
P17220	P17220	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	1	DYLAAIA	DYLAAIA	1	DYLAAIA1	1.51907e+06	1.48709e+06	1.51157e+06
D3ZG57	D3ZG57	D3ZG57_RAT	Tor4a	Torsin family 4, member A	1	DYLATHVHSHPLLLALHGPSGVGK	DYLATHVHSHPLLLALHGPSGVGK	4	DYLATHVHSHPLLLALHGPSGVGK4	14277.9	6388.04	12411.1
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	DYLCDGQEDCR	DYLC(UniMod:4)DGQEDC(UniMod:4)R	2	DYLC(UniMod:4)DGQEDC(UniMod:4)R2	2250.05	2844.85	800.6
P63326	D3ZH53;F1LT36;D3ZJY5;P63326	RS10_RAT	Rps10	Small ribosomal subunit protein eS10	0	DYLHLPPEIVPATLR	DYLHLPPEIVPATLR	3	DYLHLPPEIVPATLR3	16950.1	21638.5	23466.1
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	DYLHYHIK	DYLHYHIK	2	DYLHYHIK2	23631	25725.9	13564.2
P62282	P62282;A0A8I6AKU9;A0A8I5Y1A5	RS11_RAT	Rps11	Small ribosomal subunit protein uS17	0	DYLHYIR	DYLHYIR	2	DYLHYIR2	7474.48	11457.3	11324.4
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	DYLIDGSR	DYLIDGSR	2	DYLIDGSR2	2.00867e+06	1.79868e+06	2.03163e+06
D4A5L7	D4A5L7	D4A5L7_RAT	Slc35d3	Solute carrier family 35, member D3	1	DYLIENEALPSP	DYLIENEALPSP	2	DYLIENEALPSP2			8398.67
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	DYLLCDYNR	DYLLC(UniMod:4)DYNR	2	DYLLC(UniMod:4)DYNR2	454409	497939	461463
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	DYLLCDYNRDGDSYR	DYLLC(UniMod:4)DYNRDGDSYR	3	DYLLC(UniMod:4)DYNRDGDSYR3	24092	23178	41484.8
Q7TP48	Q7TP48	APMAP_RAT	Apmap	Adipocyte plasma membrane-associated protein	1	DYLLLVMEGTDDGR	DYLLLVMEGTDDGR	2	DYLLLVMEGTDDGR2	5926.22	6844.18	8262.45
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	DYLLMEEEFIR	DYLLMEEEFIR	2	DYLLMEEEFIR2	61336.7	58449.1	73722.3
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	DYLLSLPTGK	DYLLSLPTGK	2	DYLLSLPTGK2	14217.7	11086.1	16912.5
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	DYLNVTAVHLFK	DYLNVTAVHLFK	2	DYLNVTAVHLFK2	81539.4	62934.4	67449.6
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	DYLNVTAVHLFK	DYLNVTAVHLFK	3	DYLNVTAVHLFK3	555110	398872	473989
A0A0G2K1A2	A0A0G2K1A2	A0A0G2K1A2_RAT	Mpo	Myeloperoxidase	1	DYLPLVLGPAAMK	DYLPLVLGPAAMK	2	DYLPLVLGPAAMK2	17198.5	10868.4	9810.4
A0A0G2JUT7	A0A0G2JUT7	A0A0G2JUT7_RAT	B3glct	Beta 3-glucosyltransferase	1	DYLSHQIPVSFHK	DYLSHQIPVSFHK	4	DYLSHQIPVSFHK4	4072.24	3027.36	
Q8CIN9	Q8CIN9	RFFL_RAT	Rffl	E3 ubiquitin-protein ligase rififylin	1	DYLSLHDISTEMCR	DYLSLHDISTEMC(UniMod:4)R	3	DYLSLHDISTEMC(UniMod:4)R3	9222.51	9975.98	13525.1
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	DYLSSDTDNPTASHLFAEQLK	DYLSSDTDNPTASHLFAEQLK	3	DYLSSDTDNPTASHLFAEQLK3	48132.8	58515.9	50144.4
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	DYLTVLQQR	DYLTVLQQR	2	DYLTVLQQR2	9400.45	12847.2	9421.46
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	DYLVSLQHQR	DYLVSLQHQR	2	DYLVSLQHQR2	100479	117127	104394
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	DYLVSLQHQR	DYLVSLQHQR	3	DYLVSLQHQR3	147094	181051	161015
P48450	P48450	LSS_RAT	Lss	Lanosterol synthase	1	DYLWLGLDGMK	DYLWLGLDGMK	2	DYLWLGLDGMK2	9027.25	5602.45	7896.09
Q5U2R7	Q5U2R7	MESD_RAT	Mesd	LRP chaperone MESD	1	DYNDADMAR	DYNDADMAR	2	DYNDADMAR2	20803.7	22867.4	19697.4
Q63190	Q63190	EMD_RAT	Emd	Emerin	1	DYNDDYYEESYLTTR	DYNDDYYEESYLTTR	2	DYNDDYYEESYLTTR2	5213.89	4387.72	5123.34
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	DYNPTASVK	DYNPTASVK	2	DYNPTASVK2	409610	330219	234929
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	DYNPYNYSDSISPFNK	DYNPYNYSDSISPFNK	2	DYNPYNYSDSISPFNK2	2019.82	7057.86	1294.61
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	DYNVQIK	DYNVQIK	2	DYNVQIK2	14619.8	10591	12409.6
A0A8I6G9X6	A0A8I6G9X6	A0A8I6G9X6_RAT	Kntc1	Kinetochore associated 1	1	DYPDIHAAAK	DYPDIHAAAK	2	DYPDIHAAAK2		3861.44	5437.14
E9PU28	D3ZLZ7;E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	0	DYPLASK	DYPLASK	2	DYPLASK2	93007.5	84993.4	90139.8
P04762	P04762	CATA_RAT	Cat	Catalase	1	DYPLIPVGK	DYPLIPVGK	2	DYPLIPVGK2	51860.9	50737.2	50383.6
P10888	P10888	COX41_RAT	Cox4i1	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial	1	DYPLPDVAHVK	DYPLPDVAHVK	2	DYPLPDVAHVK2	292310	254429	251333
P10888	P10888	COX41_RAT	Cox4i1	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial	1	DYPLPDVAHVK	DYPLPDVAHVK	3	DYPLPDVAHVK3	925458	910767	867650
P04764	M0R5J4;A0A8I6ASH7;P04764	ENOA_RAT	Eno1	Alpha-enolase	0	DYPVVSIEDPFDQDDWDAWQK	DYPVVSIEDPFDQDDWDAWQK	3	DYPVVSIEDPFDQDDWDAWQK3	15240.6	9436.48	7557.77
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	DYPVYLLK	DYPVYLLK	2	DYPVYLLK2	15018.3	14688.9	12609.2
Q6IMF3	Q6IMF3	K2C1_RAT	Krt1	Keratin, type II cytoskeletal 1	1	DYQELMNTK	DYQELMNTK	2	DYQELMNTK2	1.15528e+06	1.07225e+06	1.02523e+06
Q6IG02	Q6IG02;Q6IG00	K22E_RAT	Krt2	Keratin, type II cytoskeletal 2 epidermal	0	DYQELMNVK	DYQELMNVK	2	DYQELMNVK2	392410	253759	337573
A0A8I5Y6A1	A0A8I5Y6A1	A0A8I5Y6A1_RAT	Ablim1	Actin-binding LIM protein 1	1	DYQGLFGVK	DYQGLFGVK	2	DYQGLFGVK2	6510.72	10583.6	7528.98
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	DYQLVQK	DYQLVQK	2	DYQLVQK2	39266.8	42936.1	46411.7
Q6AXR1	Q6AXR1	Q6AXR1_RAT	Tbc1d20	TBC1 domain family, member 20	1	DYQQVLLDVR	DYQQVLLDVR	2	DYQQVLLDVR2	4265.85	5005.64	5439.08
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	DYQSGQHVMVR	DYQSGQHVMVR	2	DYQSGQHVMVR2	1694.08	2493.84	
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	DYQSGQHVMVR	DYQSGQHVMVR	3	DYQSGQHVMVR3	65008.8	66014.6	57709.1
A0A8I5Y6A1	A0A8I5Y6A1	A0A8I5Y6A1_RAT	Ablim1	Actin-binding LIM protein 1	1	DYQTLPDGHMPAMR	DYQTLPDGHMPAMR	3	DYQTLPDGHMPAMR3	4620.8	7626.83	7515.6
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	DYRQDVLQK	DYRQDVLQK	3	DYRQDVLQK3	8242.74	14405.8	7972.02
F1M0U4	F1M0U4	F1M0U4_RAT	ENSRNOG00000066892	Ig-like domain-containing protein	1	DYSAVYSASVNGR	DYSAVYSASVNGR	2	DYSAVYSASVNGR2	30706.2	33540.6	35424
F1M0U4	F1M0U4	F1M0U4_RAT	ENSRNOG00000066892	Ig-like domain-containing protein	1	DYSAVYSASVNGR	DYSAVYSASVNGR	3	DYSAVYSASVNGR3	134211	130559	146498
Q9QZG1	Q9QZG1	S22AN_RAT	Slc22a23	Solute carrier family 22 member 23	1	DYSGLHDVAAVGDGLSEGATANGMK	DYSGLHDVAAVGDGLSEGATANGMK	3	DYSGLHDVAAVGDGLSEGATANGMK3	3668.93		
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	DYSGQGVVK	DYSGQGVVK	1	DYSGQGVVK1	2450.88	6817.87	4385.92
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	DYSGQGVVK	DYSGQGVVK	2	DYSGQGVVK2	879735	806854	875769
Q925G0	Q925G0	RBM3_RAT	Rbm3	RNA-binding protein 3	1	DYSGSQGGYDR	DYSGSQGGYDR	2	DYSGSQGGYDR2	4326.27		
F7F5Q9	F7F5Q9	F7F5Q9_RAT	Hcls1	Hematopoietic cell specific Lyn substrate 1	1	DYSHGFGGR	DYSHGFGGR	2	DYSHGFGGR2	25213.4	22514.7	29966.6
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	DYSKDPR	DYSKDPR	2	DYSKDPR2			101264
D3ZH14	D3ZH14	D3ZH14_RAT	Tmcc1	Transmembrane and coiled-coil domain family 1	1	DYSLIMQTLQEER	DYSLIMQTLQEER	2	DYSLIMQTLQEER2			3688.9
Q5PQN6	Q5PQN6	SPE39_RAT	Vipas39	Spermatogenesis-defective protein 39 homolog	1	DYSNDWSLSDTVR	DYSNDWSLSDTVR	2	DYSNDWSLSDTVR2	5715.44	6861.47	4606.1
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	DYSNFMASLNLR	DYSNFMASLNLR	2	DYSNFMASLNLR2	10185.3	7453.41	10805.2
D3ZMI6	D3ZMI6	D3ZMI6_RAT	Olfm4	Olfactomedin 4	1	DYSPQHPER	DYSPQHPER	2	DYSPQHPER2	77132.1	94850.4	82384.2
Q6IFV1	Q6IFV1;Q6IFU7	K1C14_RAT	Krt14	Keratin, type I cytoskeletal 14	0	DYSPYFK	DYSPYFK	2	DYSPYFK2	62143.9	71585.7	58711.5
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	DYSSGFGGK	DYSSGFGGK	1	DYSSGFGGK1	10296.4	13759.2	11906.3
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	DYSSGFGGK	DYSSGFGGK	2	DYSSGFGGK2	827975	808597	889788
P04642	P04642;A0A8I6ASS6;P42123;A0A8I6GK09	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	DYSVTANSK	DYSVTANSK	2	DYSVTANSK2	898525	878268	916286
P04041	P04041	GPX1_RAT	Gpx1	Glutathione peroxidase 1	1	DYTEMNDLQK	DYTEMNDLQK	2	DYTEMNDLQK2	54164.9	63910	55205.8
D3ZTJ0	D3ZTJ0	D3ZTJ0_RAT	Rp2	Protein XRP2	1	DYTFSGLK	DYTFSGLK	2	DYTFSGLK2	8205.73	16810.6	18499.3
D3ZTJ0	D3ZTJ0	D3ZTJ0_RAT	Rp2	Protein XRP2	1	DYTFSGLKDETVGR	DYTFSGLKDETVGR	3	DYTFSGLKDETVGR3	24912.6	12196.1	30114.5
M0RDU0	M0RDU0	HAP40_RAT	F8a1	40-kDa huntingtin-associated protein	1	DYTGALAVFTR	DYTGALAVFTR	2	DYTGALAVFTR2	27095.3	27788.8	27493.1
P98105	P98105	LYAM2_RAT	Sele	E-selectin	1	DYTHLVAIQNK	DYTHLVAIQNK	2	DYTHLVAIQNK2	1948.34		2826.87
P98105	P98105	LYAM2_RAT	Sele	E-selectin	1	DYTHLVAIQNK	DYTHLVAIQNK	3	DYTHLVAIQNK3	19354.6	9887.66	13910.4
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	DYTSGAMLTGELK	DYTSGAMLTGELK	2	DYTSGAMLTGELK2	10145.2	4321.38	7883.59
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	DYTSGAMLTGELKK	DYTSGAMLTGELKK	3	DYTSGAMLTGELKK3	16768.6	12218.1	8461.6
B2RYI2	B2RYI2	B2RYI2_RAT	Srp68	Signal recognition particle subunit SRP68	1	DYTVDGESGK	DYTVDGESGK	2	DYTVDGESGK2	12894.1	13165.5	8559.1
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	DYTYEELLNR	DYTYEELLNR	2	DYTYEELLNR2	54721	66602.5	53690.9
D3ZE26	D3ZE26	D3ZE26_RAT	Tmcc2	Transmembrane and coiled-coil domain family 2	1	DYTYMTQCLQEER	DYTYMTQC(UniMod:4)LQEER	2	DYTYMTQC(UniMod:4)LQEER2	26891.4	26874.1	33942.7
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	DYVAPGR	DYVAPGR	1	DYVAPGR1		1192.52	1956.75
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	DYVAPGR	DYVAPGR	2	DYVAPGR2	1.88837e+06	1.55038e+06	1.62271e+06
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	DYVDPSNIFGNR	DYVDPSNIFGNR	2	DYVDPSNIFGNR2	45724.2	40672.6	42251.5
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	DYVESHYQLQLCPGADCPMVIR	DYVESHYQLQLC(UniMod:4)PGADC(UniMod:4)PMVIR	3	DYVESHYQLQLC(UniMod:4)PGADC(UniMod:4)PMVIR3	11303.1	14319.1	8424.53
D4A0G7	D4A0G7	D4A0G7_RAT	Rab37	RAB37, member RAS oncogene family	1	DYVESQK	DYVESQK	1	DYVESQK1	2853.29	1386.41	
D4A0G7	D4A0G7	D4A0G7_RAT	Rab37	RAB37, member RAS oncogene family	1	DYVESQK	DYVESQK	2	DYVESQK2		89536.1	
D4A0G7	D4A0G7	D4A0G7_RAT	Rab37	RAB37, member RAS oncogene family	1	DYVESQKK	DYVESQKK	2	DYVESQKK2			20035.8
D3ZIK0	D3ZIK0	D3ZIK0_RAT	Glce	heparosan-N-sulfate-glucuronate 5-epimerase	1	DYVFLNSALR	DYVFLNSALR	2	DYVFLNSALR2	9612.27	8397.36	4727.89
P84817	P84817	FIS1_RAT	Fis1	Mitochondrial fission 1 protein	1	DYVFYLAVGNYR	DYVFYLAVGNYR	2	DYVFYLAVGNYR2	4286.57	3915.32	
A0A8I6AVP7	A0A8I6AVP7	A0A8I6AVP7_RAT	Odr4	Protein odr-4 homolog	1	DYVILATR	DYVILATR	2	DYVILATR2	16164.6	18412.3	23380.9
F7FQB8	F7FQB8	F7FQB8_RAT	Kpna4	Karyopherin subunit alpha 4	1	DYVISLGVVKPLLSFISPSIPITFLR	DYVISLGVVKPLLSFISPSIPITFLR	3	DYVISLGVVKPLLSFISPSIPITFLR3			4957.16
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	DYVPPTANLDQK	DYVPPTANLDQK	2	DYVPPTANLDQK2	97776.2	95825.3	84038.8
Q4KLJ8	Q4KLJ8	PDCL3_RAT	Pdcl3	Phosducin-like protein 3	1	DYVQEVTK	DYVQEVTK	2	DYVQEVTK2	175289	187688	180737
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	DYVSQFESSTLGK	DYVSQFESSTLGK	2	DYVSQFESSTLGK2	169985	147691	170161
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	DYVSQFESSTLGK	DYVSQFESSTLGK	3	DYVSQFESSTLGK3	458917	520520	571279
D3ZUZ4	D3ZUZ4	D3ZUZ4_RAT	Fam20b	FAM20B, glycosaminoglycan xylosylkinase	1	DYVVEGEPYAGYDR	DYVVEGEPYAGYDR	2	DYVVEGEPYAGYDR2	7609.03	7672.23	7475.85
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	DYWTCFEVNEK	DYWTC(UniMod:4)FEVNEK	2	DYWTC(UniMod:4)FEVNEK2	7663.47	4473.06	4099.46
F7F4L4	F7F4L4	F7F4L4_RAT	Dnajb12	DnaJ heat shock protein family (Hsp40) member B12	1	DYYEILGVSR	DYYEILGVSR	2	DYYEILGVSR2	4209.85	7519.5	13504.8
P09811	P09811;P09812	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	0	DYYFALAHTVR	DYYFALAHTVR	2	DYYFALAHTVR2	16457.5	15476.1	14804.9
P09811	P09811;P09812	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	0	DYYFALAHTVR	DYYFALAHTVR	3	DYYFALAHTVR3	66237.3	80907.5	78090
Q5XIP0	Q5XIP0	Q5XIP0_RAT	Dnajb4	DnaJ heat shock protein family (Hsp40) member B4	1	DYYHILGIEK	DYYHILGIEK	3	DYYHILGIEK3	7076.5	2494.28	3587.6
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	DYYLTGDQGFLK	DYYLTGDQGFLK	2	DYYLTGDQGFLK2	6799.65	6796.82	5164.31
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	DYYQPNAGK	DYYQPNAGK	2	DYYQPNAGK2	68923	77789.6	96254.9
D3ZUU5	D3ZUU5	D3ZUU5_RAT	Dnajb1	DnaJ heat shock protein family (Hsp40) member B1	1	DYYQTLGLAR	DYYQTLGLAR	2	DYYQTLGLAR2	4719.63	2818.31	
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	DYYTDLSILQK	DYYTDLSILQK	2	DYYTDLSILQK2	8202.98	3809.83	9995
Q9Z158	Q9Z158	STX17_RAT	Stx17	Syntaxin-17	1	EAAAAATAEFLQLHLESVEELKK	EAAAAATAEFLQLHLESVEELKK	4	EAAAAATAEFLQLHLESVEELKK4	7608.34	5308.79	7176.67
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	EAAAALRPAPPCESLVSR	EAAAALRPAPPC(UniMod:4)ESLVSR	3	EAAAALRPAPPC(UniMod:4)ESLVSR3	48021.2	44101.9	45621.5
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	EAAAAVDVK	EAAAAVDVK	2	EAAAAVDVK2	18716.1	24851.4	32174.2
B2RYI5	B2RYI5;A0A8I6AWD6	B2RYI5_RAT	Ankrd40	Ankyrin repeat domain 40	0	EAAALGDIR	EAAALGDIR	2	EAAALGDIR2	12735.1		14840.1
A0A8I6B3N3	A0A8I6B3N3	A0A8I6B3N3_RAT	Atp6v1g1	V-type proton ATPase subunit G	1	EAAALGSHGSCSSEVEK	EAAALGSHGSC(UniMod:4)SSEVEK	3	EAAALGSHGSC(UniMod:4)SSEVEK3	10748.3	18956.7	7184.22
Q5M7W7	Q5M7W7	SYPM_RAT	Pars2	Probable proline--tRNA ligase, mitochondrial	1	EAAATEIVER	EAAATEIVER	2	EAAATEIVER2	10713	6410.12	6062.32
Q5U2Z3	Q5U2Z3	NP1L4_RAT	Nap1l4	Nucleosome assembly protein 1-like 4	1	EAAAVEELNPK	EAAAVEELNPK	2	EAAAVEELNPK2	344577	329107	356791
Q6AY19	Q6AY19	COQ8B_RAT	Coq8b	Atypical kinase COQ8B, mitochondrial	1	EAACAQTFK	EAAC(UniMod:4)AQTFK	2	EAAC(UniMod:4)AQTFK2	996.398	3848.53	
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	EAACLCLPGWVGER	EAAC(UniMod:4)LC(UniMod:4)LPGWVGER	2	EAAC(UniMod:4)LC(UniMod:4)LPGWVGER2	59896.4	82872.3	73156.6
P21674	P21674	FST_RAT	Fst	Follistatin	1	EAACSSGVLLEVK	EAAC(UniMod:4)SSGVLLEVK	2	EAAC(UniMod:4)SSGVLLEVK2	5049.38	3234.15	5291.54
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	EAADCPPPLTR	EAADC(UniMod:4)PPPLTR	2	EAADC(UniMod:4)PPPLTR2	33474.9	29250.7	28742.6
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	EAADMLK	EAADMLK	2	EAADMLK2	86089.3	79839.4	96852.9
A0A8I6GJS5	A0A8I6GJS5	A0A8I6GJS5_RAT	LOC100362814	RIKEN cDNA D430041D05 gene	1	EAADMSGLPR	EAADMSGLPR	2	EAADMSGLPR2	6049.57	5456.32	6199.33
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	EAADPLASK	EAADPLASK	1	EAADPLASK1	10163.5	10032.5	9465.28
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	EAADPLASK	EAADPLASK	2	EAADPLASK2	442550	484789	431633
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	EAADVIQK	EAADVIQK	2	EAADVIQK2	8640.13	8966.32	13599.6
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	EAAEAYR	EAAEAYR	2	EAAEAYR2	59707.5	50687.3	55704.4
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	EAAEGLGSHER	EAAEGLGSHER	2	EAAEGLGSHER2	238075	150065	226506
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	EAAEGLGSHER	EAAEGLGSHER	3	EAAEGLGSHER3	251354	435452	481526
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	EAAENSLVAYK	EAAENSLVAYK	2	EAAENSLVAYK2	2.70353e+06	2.86156e+06	3.04359e+06
P41123	F1M2E9;A0A8I5ZNK4;P41123	RL13_RAT	Rpl13	Large ribosomal subunit protein eL13	0	EAAEQDVEK	EAAEQDVEK	2	EAAEQDVEK2	6877.74		4810.12
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	EAAEQWLDNCK	EAAEQWLDNC(UniMod:4)K	2	EAAEQWLDNC(UniMod:4)K2	2186.02	2463.2	
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	EAAESGIIK	EAAESGIIK	2	EAAESGIIK2	20529.6	20215.2	24042.9
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	EAAEVCEYAMSLAK	EAAEVC(UniMod:4)EYAMSLAK	2	EAAEVC(UniMod:4)EYAMSLAK2	9232.97	7925.8	11409.6
A0A8I5ZYZ8	A0A8I5ZYZ8	A0A8I5ZYZ8_RAT	Ube2m	Ubiquitin-conjugating enzyme E2M	1	EAAEVLQNNR	EAAEVLQNNR	2	EAAEVLQNNR2	12491.4	10868.7	11966.3
A0A8I5ZYZ8	A0A8I5ZYZ8	A0A8I5ZYZ8_RAT	Ube2m	Ubiquitin-conjugating enzyme E2M	1	EAAEVLQNNRR	EAAEVLQNNRR	3	EAAEVLQNNRR3	36888.1	52258.4	49673.8
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	EAAEVSEHAVMLAR	EAAEVSEHAVMLAR	2	EAAEVSEHAVMLAR2	2308.22		
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	EAAEVSEHAVMLAR	EAAEVSEHAVMLAR	3	EAAEVSEHAVMLAR3	33622.8	39657.1	43877.9
Q9JJK4	Q9JJK4	PEX3_RAT	Pex3	Peroxisomal biogenesis factor 3	1	EAAEYIAQAR	EAAEYIAQAR	2	EAAEYIAQAR2	9431.82	8911.81	5149.74
D4ADT5	D4ADT5	D4ADT5_RAT	Rig1	RNA helicase	1	EAAFDETEQDLTR	EAAFDETEQDLTR	2	EAAFDETEQDLTR2	639.745	1872.82	2019.25
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	EAAFHPEVAPDVR	EAAFHPEVAPDVR	2	EAAFHPEVAPDVR2	573459	441635	497735
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	EAAFHPEVAPDVR	EAAFHPEVAPDVR	3	EAAFHPEVAPDVR3	3.45667e+06	3.19816e+06	3.52289e+06
Q499T2	Q499T2	GILT_RAT	Ifi30	Gamma-interferon-inducible lysosomal thiol reductase	1	EAAFLTIVCMEEMEDMEKK	EAAFLTIVC(UniMod:4)MEEMEDMEKK	3	EAAFLTIVC(UniMod:4)MEEMEDMEKK3	3305.58		
P61943	P61943	SIA10_RAT	St3gal6	Type 2 lactosamine alpha-2,3-sialyltransferase	1	EAAFQLLR	EAAFQLLR	2	EAAFQLLR2	7909.92	3754.08	3643.29
Q6P503	Q6P503	Q6P503_RAT	Atp6v1d	V-type proton ATPase subunit D	1	EAAFSLAEAK	EAAFSLAEAK	2	EAAFSLAEAK2	3668.25	6713.88	4669.93
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	EAAHLLNDALSIR	EAAHLLNDALSIR	2	EAAHLLNDALSIR2	5546.06	1524.27	4846.65
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	EAAHLLNDALSIR	EAAHLLNDALSIR	3	EAAHLLNDALSIR3	55624.7	43766.7	36313.2
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	EAAILSEWLSTTEAELVQK	EAAILSEWLSTTEAELVQK	3	EAAILSEWLSTTEAELVQK3	7094.8	12676	7720.64
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	EAAIQGSLASLEAEQASIR	EAAIQGSLASLEAEQASIR	2	EAAIQGSLASLEAEQASIR2	21354.1	28183	23977.7
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	EAAIQGSLASLEAEQASIR	EAAIQGSLASLEAEQASIR	3	EAAIQGSLASLEAEQASIR3	45390.6	49511.4	50422.4
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	EAAIWELEER	EAAIWELEER	2	EAAIWELEER2	111503	148936	118200
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	EAALEAAVLNKEE	EAALEAAVLNKEE	2	EAALEAAVLNKEE2	25913.8	17747.5	21149.5
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	EAALEAAVLNKEE	EAALEAAVLNKEE	3	EAALEAAVLNKEE3	2944.43	5834.41	4174.44
G3V8Z6	G3V8Z6	G3V8Z6_RAT	Krit1	KRIT1, ankyrin repeat containing	1	EAALFIVPSVVK	EAALFIVPSVVK	2	EAALFIVPSVVK2	20802	17310.5	19875.1
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	EAALGAGFSDK	EAALGAGFSDK	2	EAALGAGFSDK2	130911	130876	123947
Q5U1Y1	Q5U1Y1	RAB34_RAT	Rab34	Ras-related protein Rab-34	1	EAALHVR	EAALHVR	2	EAALHVR2	40834.6	53587.9	45586.5
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	EAALQAQK	EAALQAQK	2	EAALQAQK2	6565.47	9249.16	8905.12
D4ACD2	D4ACD2	D4ACD2_RAT	Bach1	BTB domain and CNC homolog 1	1	EAALSPEQIQILAK	EAALSPEQIQILAK	2	EAALSPEQIQILAK2	13333.1	15182.8	14674.5
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	EAALSTALSEK	EAALSTALSEK	2	EAALSTALSEK2	23526.7	16979.2	31295.2
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EAALTSEEVGADLEQVEVLQK	EAALTSEEVGADLEQVEVLQK	3	EAALTSEEVGADLEQVEVLQK3	270367	369404	321062
P04906	P04906	GSTP1_RAT	Gstp1	Glutathione S-transferase P	1	EAALVDMVNDGVEDLR	EAALVDMVNDGVEDLR	2	EAALVDMVNDGVEDLR2	136019	89721.7	98592.9
P04906	P04906	GSTP1_RAT	Gstp1	Glutathione S-transferase P	1	EAALVDMVNDGVEDLR	EAALVDMVNDGVEDLR	3	EAALVDMVNDGVEDLR3	37299.5	41769.3	34780.3
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	EAALWEMEEHQLQER	EAALWEMEEHQLQER	2	EAALWEMEEHQLQER2	1232.73	1714.31	
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	EAALWEMEEHQLQER	EAALWEMEEHQLQER	3	EAALWEMEEHQLQER3	42131.4	41851.3	51993.7
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	EAAMGQGFDR	EAAMGQGFDR	2	EAAMGQGFDR2	45258.6	41286.1	44900.5
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	EAAMPEAIPDR	EAAMPEAIPDR	2	EAAMPEAIPDR2	41473.1	43244.3	33349.8
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	EAANFIMK	EAANFIMK	2	EAANFIMK2	7764.64	12059.3	9119.64
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	EAANQDALQEAGTFR	EAANQDALQEAGTFR	2	EAANQDALQEAGTFR2	2830.35	6966.56	4720.07
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	EAAQALLLAELR	EAAQALLLAELR	2	EAAQALLLAELR2	17351	14489.2	12399.3
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	EAAQALLLAELRR	EAAQALLLAELRR	3	EAAQALLLAELRR3	6966.23	6554.98	10711.5
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	EAAQPLVGAEAEDSHSK	EAAQPLVGAEAEDSHSK	2	EAAQPLVGAEAEDSHSK2	2427.23	1343.43	1544.1
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	EAAQPLVGAEAEDSHSK	EAAQPLVGAEAEDSHSK	3	EAAQPLVGAEAEDSHSK3	33384.3	25406.3	28339.6
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EAASELLMR	EAASELLMR	2	EAASELLMR2	427164	448987	383697
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	EAASIHCNSAGDSGVDLQEGSR	EAASIHC(UniMod:4)NSAGDSGVDLQEGSR	3	EAASIHC(UniMod:4)NSAGDSGVDLQEGSR3	9680.59	9011.12	11543.7
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	EAASILQELQVETYGSMEK	EAASILQELQVETYGSMEK	3	EAASILQELQVETYGSMEK3	17136.9	23533.9	23385.3
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	EAASLMK	EAASLMK	1	EAASLMK1	5401.6	5952.89	4400.06
P98087	P98087	CBLN2_RAT	Cbln2	Cerebellin-2	1	EAASNGVLLLMER	EAASNGVLLLMER	2	EAASNGVLLLMER2	43611.9	29679.9	42718.4
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	EAASQRPLSSSASNR	EAASQRPLSSSASNR	3	EAASQRPLSSSASNR3	16256.7		16393.9
B2RYK9	B2RYK9	B2RYK9_RAT	Dmkn	Dermokine	1	EAASSGIQDALGQGHGEGGYALMGGR	EAASSGIQDALGQGHGEGGYALMGGR	3	EAASSGIQDALGQGHGEGGYALMGGR3	17104.4		8550.43
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	EAATQAQQTLGSTIDK	EAATQAQQTLGSTIDK	2	EAATQAQQTLGSTIDK2	10719	11149.5	11471
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	EAATSNLK	EAATSNLK	2	EAATSNLK2	133143	74896.8	90272.9
D3Z9H1	D3Z9H1	D3Z9H1_RAT	Cbln3	Cerebellin 3 precursor	1	EAATSSVLLPLDPGDR	EAATSSVLLPLDPGDR	2	EAATSSVLLPLDPGDR2	32492.1	26535.7	25606.8
P09760	P09760	FER_RAT	Fer	Tyrosine-protein kinase Fer	1	EAAVLELEK	EAAVLELEK	2	EAAVLELEK2	5940.64	14400.7	
F1M332	F1M332	F1M332_RAT	Arhgap28	Rho GTPase activating protein 28	1	EAAVMLK	EAAVMLK	2	EAAVMLK2	14564.4	22692.2	16018.8
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	EAAVQLINNYVK	EAAVQLINNYVK	2	EAAVQLINNYVK2	698272	751653	751366
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	EAAVQLINNYVK	EAAVQLINNYVK	3	EAAVQLINNYVK3	10423.4	14126.3	5147.9
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	EAAVSHAGSMHR	EAAVSHAGSMHR	2	EAAVSHAGSMHR2			9651.49
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	EAAVSHAGSMHR	EAAVSHAGSMHR	3	EAAVSHAGSMHR3			58172.6
Q62871	Q62871	DC1I2_RAT	Dync1i2	Cytoplasmic dynein 1 intermediate chain 2	1	EAAVSVQEESDLEKK	EAAVSVQEESDLEKK	3	EAAVSVQEESDLEKK3	8214.34		
F7FQB8	A0A8I5ZWC6;F7FQB8	F7FQB8_RAT	Kpna4	Karyopherin subunit alpha 4	0	EAAWAISNLTISGR	EAAWAISNLTISGR	2	EAAWAISNLTISGR2	161754	143532	138176
F7FQB8	A0A8I5ZWC6;F7FQB8	F7FQB8_RAT	Kpna4	Karyopherin subunit alpha 4	0	EAAWAISNLTISGR	EAAWAISNLTISGR	3	EAAWAISNLTISGR3	2870.84		1678.07
P83953	P83953	IMA5_RAT	Kpna1	Importin subunit alpha-5	1	EAAWAITNATSGGSAEQIK	EAAWAITNATSGGSAEQIK	2	EAAWAITNATSGGSAEQIK2	29493.1	31772.4	28471.1
P83953	P83953	IMA5_RAT	Kpna1	Importin subunit alpha-5	1	EAAWAITNATSGGSAEQIK	EAAWAITNATSGGSAEQIK	3	EAAWAITNATSGGSAEQIK3	14298.1	19248.3	12833.8
A0A0G2JZS1	A0A0G2JZS1	A0A0G2JZS1_RAT	Kpna6	Importin subunit alpha	1	EAAWAITNATSGGTPEQIR	EAAWAITNATSGGTPEQIR	3	EAAWAITNATSGGTPEQIR3	6971.42	10609	6893.15
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	EACAQLQSTRPPPQLR	EAC(UniMod:4)AQLQSTRPPPQLR	3	EAC(UniMod:4)AQLQSTRPPPQLR3	13419.8	16325.6	10903.1
Q3B7D0	Q3B7D0	HEM6_RAT	Cpox	Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial	1	EACDQHGPDIYPK	EAC(UniMod:4)DQHGPDIYPK	3	EAC(UniMod:4)DQHGPDIYPK3	14757.6	13988.2	6447.01
Q920P0	Q920P0	DCXR_RAT	Dcxr	L-xylulose reductase	1	EACDTSFNVNFR	EAC(UniMod:4)DTSFNVNFR	2	EAC(UniMod:4)DTSFNVNFR2		2223.71	1490.36
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	EACEAVGATLETLHFGK	EAC(UniMod:4)EAVGATLETLHFGK	3	EAC(UniMod:4)EAVGATLETLHFGK3	9000.57	9772.32	7063.39
Q6IE64	Q6IE64	C1RL_RAT	C1rl	Complement C1r subcomponent-like protein	1	EACEAWLR	EAC(UniMod:4)EAWLR	2	EAC(UniMod:4)EAWLR2	8492.08	5859.57	
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	EACFQQEGPQLIMR	EAC(UniMod:4)FQQEGPQLIMR	2	EAC(UniMod:4)FQQEGPQLIMR2	99381.3	94745	100409
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	EACFQQEGPQLIMR	EAC(UniMod:4)FQQEGPQLIMR	3	EAC(UniMod:4)FQQEGPQLIMR3	23228.8	28186.7	26745.9
P60123	A0A0G2K0H9;P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	0	EACGVIVELIK	EAC(UniMod:4)GVIVELIK	2	EAC(UniMod:4)GVIVELIK2	50549.9	47353.8	30180.9
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	EACITLGHLSSVLGNK	EAC(UniMod:4)ITLGHLSSVLGNK	3	EAC(UniMod:4)ITLGHLSSVLGNK3	16207	26453.6	16364.7
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	EACITVAHLSTVLGNK	EAC(UniMod:4)ITVAHLSTVLGNK	3	EAC(UniMod:4)ITVAHLSTVLGNK3	16516.8	23883.2	25640.5
D3ZED8	D3ZED8	D3ZED8_RAT	Pmel	Premelanosome protein	1	EACMDISSPGCQPPAQR	EAC(UniMod:4)MDISSPGC(UniMod:4)QPPAQR	2	EAC(UniMod:4)MDISSPGC(UniMod:4)QPPAQR2	166347	150534	184003
D3ZED8	D3ZED8	D3ZED8_RAT	Pmel	Premelanosome protein	1	EACMDISSPGCQPPAQR	EAC(UniMod:4)MDISSPGC(UniMod:4)QPPAQR	3	EAC(UniMod:4)MDISSPGC(UniMod:4)QPPAQR3	241278	259683	276289
P83953	Q56R16;P83953;A0A0G2JZS1	IMA5_RAT	Kpna1	Importin subunit alpha-5	0	EACWTISNITAGNR	EAC(UniMod:4)WTISNITAGNR	2	EAC(UniMod:4)WTISNITAGNR2	56865.5	57804.9	57886.4
P83953	Q56R16;P83953;A0A0G2JZS1	IMA5_RAT	Kpna1	Importin subunit alpha-5	0	EACWTISNITAGNR	EAC(UniMod:4)WTISNITAGNR	3	EAC(UniMod:4)WTISNITAGNR3	19595	26923.4	19916.7
A0A0G2JUU7	A0A0G2JUU7	A0A0G2JUU7_RAT	Tubgcp3	Gamma-tubulin complex component	1	EADAALFSELHR	EADAALFSELHR	3	EADAALFSELHR3	9804.76	11143.9	15626.6
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	EADAIDDALSSK	EADAIDDALSSK	2	EADAIDDALSSK2	204867	211077	210714
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	EADDIVNWLK	EADDIVNWLK	2	EADDIVNWLK2	1.71513e+06	1.82874e+06	1.84879e+06
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	EADDIVNWLKK	EADDIVNWLKK	2	EADDIVNWLKK2	29190.1	20913	19262
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	EADDIVNWLKK	EADDIVNWLKK	3	EADDIVNWLKK3	80293.8	127260	121312
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	EADDLEQWITEK	EADDLEQWITEK	2	EADDLEQWITEK2	6505.99	13213.2	9330.71
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	EADDVKEQIDKK	EADDVKEQIDKK	3	EADDVKEQIDKK3	7407.38	5584.51	5338.01
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	EADEQPVAELIEK	EADEQPVAELIEK	2	EADEQPVAELIEK2	22263.9	17120.2	22347.3
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	EADESLKEASLNK	EADESLKEASLNK	3	EADESLKEASLNK3	11375.3	3312.83	
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	EADESLNFEEQILEAAK	EADESLNFEEQILEAAK	2	EADESLNFEEQILEAAK2	229127	180516	218923
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	EADESLNFEEQILEAAK	EADESLNFEEQILEAAK	3	EADESLNFEEQILEAAK3	94803.3	76197.1	105095
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	EADFCFR	EADFC(UniMod:4)FR	2	EADFC(UniMod:4)FR2	18094	14710.7	23020.7
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	EADFQAIDNEVGFTK	EADFQAIDNEVGFTK	2	EADFQAIDNEVGFTK2	40554.4	44140.7	40111.4
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	EADFQAIDNEVGFTK	EADFQAIDNEVGFTK	3	EADFQAIDNEVGFTK3	2369.57	5044.33	
D3ZTC4	D3ZTC4	D3ZTC4_RAT	Ccdc88b	Coiled-coil domain containing 88B	1	EADGTGSSSPAPMR	EADGTGSSSPAPMR	2	EADGTGSSSPAPMR2	1511.98	1635.53	
P0DP29;P0DP30;P0DP31	P0DP30;P0DP29;P0DP31	CALM1_RAT;CALM2_RAT;CALM3_RAT	Calm1;Calm2;Calm3	Calmodulin-1	0	EADIDGDGQVNYEEFVQMMTAK	EADIDGDGQVNYEEFVQMMTAK	3	EADIDGDGQVNYEEFVQMMTAK3	550287	675062	664817
P23965	P23965	ECI1_RAT	Eci1	Enoyl-CoA delta isomerase 1, mitochondrial	1	EADIQNFTSFISR	EADIQNFTSFISR	2	EADIQNFTSFISR2	60454.8	55499	44878.3
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	EADLDFAR	EADLDFAR	2	EADLDFAR2	30626.8	32838	29110.8
A0A8I6ANR6	A0A8I6ANR6	A0A8I6ANR6_RAT	Chuk	IkappaB kinase	1	EADNTVMFMQGK	EADNTVMFMQGK	2	EADNTVMFMQGK2	3881.71	5811.62	7130.69
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	EADPDDHYQSGEGTQATTDK	EADPDDHYQSGEGTQATTDK	3	EADPDDHYQSGEGTQATTDK3	15487.6	16475.4	20027.7
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	EADPLAASEASQPR	EADPLAASEASQPR	2	EADPLAASEASQPR2	3486.54		5875.76
Q5EGY4	Q5EGY4	YKT6_RAT	Ykt6	Synaptobrevin homolog YKT6	1	EADPMSK	EADPMSK	2	EADPMSK2	31641.6	35958.4	
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	EADQGAYTCEAMNSR	EADQGAYTC(UniMod:4)EAMNSR	2	EADQGAYTC(UniMod:4)EAMNSR2	48551	50181.9	45280.6
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	EADQGAYTCEAMNSR	EADQGAYTC(UniMod:4)EAMNSR	3	EADQGAYTC(UniMod:4)EAMNSR3			8118.95
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	EADSREDAIHFLQNEK	EADSREDAIHFLQNEK	3	EADSREDAIHFLQNEK3	2060.86	1432.8	0
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	EADSSGGGPTATAGPPAAAEEAQRPR	EADSSGGGPTATAGPPAAAEEAQRPR	3	EADSSGGGPTATAGPPAAAEEAQRPR3	27749.2	17109.2	17318.4
P01026	P01026	CO3_RAT	C3	Complement C3	1	EADVSLTAFVLIALQEAR	EADVSLTAFVLIALQEAR	2	EADVSLTAFVLIALQEAR2	22082.6	11612.8	
P01026	P01026	CO3_RAT	C3	Complement C3	1	EADVSLTAFVLIALQEAR	EADVSLTAFVLIALQEAR	3	EADVSLTAFVLIALQEAR3		27692.4	41071.9
B4F7C7	B4F7C7	B4F7C7_RAT	Hebp1	Heme binding protein 1	1	EADYVAHATQLR	EADYVAHATQLR	3	EADYVAHATQLR3	4444.92	1111.33	5473.09
P30009	P30009	MARCS_RAT	Marcks	Myristoylated alanine-rich C-kinase substrate	1	EAEAAEPEQPEQPEQPAAEEPR	EAEAAEPEQPEQPEQPAAEEPR	3	EAEAAEPEQPEQPEQPAAEEPR3	20842	22679.8	22063
M0RD14	M0RD14	M0RD14_RAT	LOC100362738	Pyruvate kinase	1	EAEAAIYHLQLFEELR	EAEAAIYHLQLFEELR	3	EAEAAIYHLQLFEELR3	53980.4	57274	53251.2
M0RD14	M0RD14	M0RD14_RAT	LOC100362738	Pyruvate kinase	1	EAEAAIYHLQLFEELRR	EAEAAIYHLQLFEELRR	3	EAEAAIYHLQLFEELRR3	62441.9	59209.3	74513.4
M0RD14	M0RD14	M0RD14_RAT	LOC100362738	Pyruvate kinase	1	EAEAAIYHLQLFEELRR	EAEAAIYHLQLFEELRR	4	EAEAAIYHLQLFEELRR4	39846.8	39219.4	42327.5
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	EAEAASENEETDISK	EAEAASENEETDISK	2	EAEAASENEETDISK2	23603.1	23701.7	18035.8
P11980	P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	1	EAEAAVFHR	EAEAAVFHR	2	EAEAAVFHR2	7105.09	4096.51	3263.61
P48548	P48548	KCNJ5_RAT	Kcnj5	G protein-activated inward rectifier potassium channel 4	1	EAEAEHDEEEEPNGLSVSR	EAEAEHDEEEEPNGLSVSR	3	EAEAEHDEEEEPNGLSVSR3	11955.3	3240.11	10785.2
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	EAEAGAAAVGPSR	EAEAGAAAVGPSR	2	EAEAGAAAVGPSR2	34746.8	30421	27092.8
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	EAEALIER	EAEALIER	2	EAEALIER2	34422.1	42373.9	44061.6
A0A0G2KAF4	A0A0G2KAF4	A0A0G2KAF4_RAT	Nfxl1	Nuclear transcription factor, X-box binding-like 1	1	EAEANAALEEEK	EAEANAALEEEK	2	EAEANAALEEEK2	2390.82	1182.76	
E9PST5	E9PST5	E9PST5_RAT	Acin1	Apoptotic chromatin condensation inducer 1	1	EAEAPILK	EAEAPILK	2	EAEAPILK2	6540.59	6437.54	12339.7
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	EAEAVVEPK	EAEAVVEPK	2	EAEAVVEPK2	4655.96		5519.43
Q9QY17	Q9QY17;Q9Z0W5	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	0	EAEDGFRK	EAEDGFRK	2	EAEDGFRK2	17072.3		20573.4
D3ZWA1	D3ZWA1	D3ZWA1_RAT	Mindy2	Ubiquitin carboxyl-terminal hydrolase	1	EAEDGPAGR	EAEDGPAGR	2	EAEDGPAGR2			24291.9
A0A8I5ZRQ9	A0A8I5ZRQ9	A0A8I5ZRQ9_RAT	Akt1s1	AKT1 substrate 1	1	EAEDNQVFGDLPRPR	EAEDNQVFGDLPRPR	3	EAEDNQVFGDLPRPR3	9870.38	14781.4	15591.3
B5DF86	B5DF86	B5DF86_RAT	Cog8	Conserved oligomeric Golgi complex subunit 8	1	EAEEISSNR	EAEEISSNR	2	EAEEISSNR2	6552.39	8589.14	
B5DF86	B5DF86	B5DF86_RAT	Cog8	Conserved oligomeric Golgi complex subunit 8	1	EAEEISSNRR	EAEEISSNRR	3	EAEEISSNRR3			26766.1
Q4V8E4	Q4V8E4	CFA36_RAT	Cfap36	Cilia- and flagella-associated protein 36	1	EAEEMTEKPEMTAEEK	EAEEMTEKPEMTAEEK	3	EAEEMTEKPEMTAEEK3	5930.52	2898.19	8832.12
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	EAEESLLQQEQEQEETLK	EAEESLLQQEQEQEETLK	3	EAEESLLQQEQEQEETLK3	2349.52	2788.03	6645.45
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	EAEESYMLAK	EAEESYMLAK	2	EAEESYMLAK2	23930.6	21189.9	19200.2
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	EAEETQNSLQAECDQYR	EAEETQNSLQAEC(UniMod:4)DQYR	3	EAEETQNSLQAEC(UniMod:4)DQYR3	3743.41	7656.72	4673.69
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	EAEETVLGLR	EAEETVLGLR	2	EAEETVLGLR2	8123.18	11340.1	5528.04
Q5I6B8	Q5CZZ9;Q5I6B8;D3ZSI8	PI51C_RAT	Pip5k1c	Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma	0	EAEFLQK	EAEFLQK	2	EAEFLQK2	28841.6	28090.9	29427.5
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	EAEGAPQVEAGK	EAEGAPQVEAGK	2	EAEGAPQVEAGK2	67038.8	46606.6	59381.7
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	EAEGAPQVEAGKR	EAEGAPQVEAGKR	3	EAEGAPQVEAGKR3	15449.4	31123.2	11985.3
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	EAEHLYHTLESSYQK	EAEHLYHTLESSYQK	3	EAEHLYHTLESSYQK3	3926.57	1888.49	2458.52
A0A8I5ZUD8	A0A8I5ZUD8	A0A8I5ZUD8_RAT	Slc30a9	Proton-coupled zinc antiporter SLC30A9, mitochondrial	1	EAEIEYR	EAEIEYR	2	EAEIEYR2	23534.2	14002.7	13122.2
Q3B7D0	Q3B7D0	HEM6_RAT	Cpox	Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial	1	EAEILEVLR	EAEILEVLR	2	EAEILEVLR2	12745.6	4694.25	9638.71
Q62720	Q62720	ZNT1_RAT	Slc30a1	Proton-coupled zinc antiporter SLC30A1	1	EAEKAPTVSISCLELSENLEK	EAEKAPTVSISC(UniMod:4)LELSENLEK	3	EAEKAPTVSISC(UniMod:4)LELSENLEK3	15937.9	15894.2	25174.5
B3GNI6	A0A8I6AA08;B3GNI6	SEP11_RAT	Septin11	Septin-11	0	EAEKELHEK	EAEKELHEK	2	EAEKELHEK2			2050.71
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	EAELDMNEELDKK	EAELDMNEELDKK	3	EAELDMNEELDKK3	14016.9	16275	8028.22
B1WBT4	B1WBT4	B1WBT4_RAT	Srpk2	SRSF protein kinase 2	1	EAELEDTTEEETAK	EAELEDTTEEETAK	2	EAELEDTTEEETAK2	6352.8	4585.53	6606.18
Q5HZE4	Q5HZE4	MTNA_RAT	Mri1	Methylthioribose-1-phosphate isomerase	1	EAELEGATEETVR	EAELEGATEETVR	2	EAELEGATEETVR2	2604.15	2931.87	3481.02
G3V9N0	D3ZSR2;G3V9N0	G3V9N0_RAT	Pabpc4	Polyadenylate-binding protein	0	EAELGAK	EAELGAK	1	EAELGAK1	4886.53	1229.59	3717.62
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	EAELLEPLMPAIR	EAELLEPLMPAIR	2	EAELLEPLMPAIR2	90074.6	129129	112363
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	EAELLEPLMPAIR	EAELLEPLMPAIR	3	EAELLEPLMPAIR3	13326.8	11697.8	18449.6
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	EAEMEEHR	EAEMEEHR	2	EAEMEEHR2			6944.94
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	EAEMEEHREHIK	EAEMEEHREHIK	2	EAEMEEHREHIK2		791.69	
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	EAEMEEHREHIK	EAEMEEHREHIK	3	EAEMEEHREHIK3			39144.2
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	EAEMEEHREHIK	EAEMEEHREHIK	4	EAEMEEHREHIK4			50643.7
P30836	P30836	LYAM1_RAT	Sell	L-selectin	1	EAENWGTGEPNNK	EAENWGTGEPNNK	2	EAENWGTGEPNNK2	16257.5	22390.2	22327.5
P37285	A0A8I5Y868;P37285	KLC1_RAT	Klc1	Kinesin light chain 1	0	EAEPLCK	EAEPLC(UniMod:4)K	2	EAEPLC(UniMod:4)K2	74095.6	48742.7	156752
Q5PQM2	Q5PQM2;Q68G30	KLC4_RAT	Klc4	Kinesin light chain 4	0	EAEPLCQR	EAEPLC(UniMod:4)QR	2	EAEPLC(UniMod:4)QR2	28789.9	25330	24846.5
Q9QXY4	Q9QXY4	OGFR_RAT	Ogfr	Opioid growth factor receptor	1	EAEPPCPVAR	EAEPPC(UniMod:4)PVAR	2	EAEPPC(UniMod:4)PVAR2	52236.1	52481.1	54309.3
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	EAEPSNFANFSAYPSEEDMIEWAK	EAEPSNFANFSAYPSEEDMIEWAK	3	EAEPSNFANFSAYPSEEDMIEWAK3	14583.2	19821.8	20920.2
Q99P99	Q99P99	HDAC4_RAT	Hdac4	Histone deacetylase 4	1	EAEPSQRPATEQELLFR	EAEPSQRPATEQELLFR	3	EAEPSQRPATEQELLFR3	7797.39	12550.7	12613.6
Q3MQ06	Q3MQ06	ATG5_RAT	Atg5	Autophagy protein 5	1	EAEPYYLLLPR	EAEPYYLLLPR	2	EAEPYYLLLPR2	10474.3	16864.5	14078.3
D3ZPA7	D3ZPA7	D3ZPA7_RAT	Scara3	Scavenger receptor class A, member 3	1	EAEQLGQEIR	EAEQLGQEIR	2	EAEQLGQEIR2	4213.21	4041.97	
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	EAEQQAALAR	EAEQQAALAR	2	EAEQQAALAR2	117253	109920	118878
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	EAEREVTDLLR	EAEREVTDLLR	3	EAEREVTDLLR3	37196.9	39251.2	34180.7
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	EAESLIAK	EAESLIAK	1	EAESLIAK1	4441.53	2797.2	4188.12
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	EAESLIAK	EAESLIAK	2	EAESLIAK2	231158	232493	244977
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	EAESSPFVER	EAESSPFVER	2	EAESSPFVER2	4.00668e+06	4.96281e+06	4.62949e+06
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	EAETALPIEMDLAPPEDVALPK	EAETALPIEMDLAPPEDVALPK	3	EAETALPIEMDLAPPEDVALPK3	24879.5	48035.4	22143.4
D3ZHK4	D3ZHK4	D3ZHK4_RAT	Rb1cc1	RB1-inducible coiled-coil 1	1	EAETDEIK	EAETDEIK	2	EAETDEIK2	3684.29		
Q63610	Q63610;P58775;P09495;P04692;A0A8I5YC74	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	0	EAETRAEFAER	EAETRAEFAER	3	EAETRAEFAER3	8649.1	5989.88	5174.25
A0A8I5Y9E9	A0A8I5Y9E9	A0A8I5Y9E9_RAT	Trem2	Triggering receptor expressed on myeloid cells 2	1	EAEVLQK	EAEVLQK	1	EAEVLQK1	1295.07	1136.44	1125.93
A0A8I5Y7I2	A0A8I5Y7I2	A0A8I5Y7I2_RAT	Kctd12	Potassium channel tetramerization domain containing 12	1	EAEYFELPELVR	EAEYFELPELVR	2	EAEYFELPELVR2	308211	257855	303853
A0A8I5Y7I2	A0A8I5Y7I2	A0A8I5Y7I2_RAT	Kctd12	Potassium channel tetramerization domain containing 12	1	EAEYFELPELVR	EAEYFELPELVR	3	EAEYFELPELVR3	17366.6	11642.3	17313.5
A0A8I5ZVU1	A0A8I5ZVU1	A0A8I5ZVU1_RAT	Uckl1	Uridine-cytidine kinase	1	EAFAIGLGGGSASGK	EAFAIGLGGGSASGK	2	EAFAIGLGGGSASGK2	5793.23	10355.9	
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	EAFAIVPVSPAEVR	EAFAIVPVSPAEVR	2	EAFAIVPVSPAEVR2	64389	57110.1	67475
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	EAFCQLLQLMK	EAFC(UniMod:4)QLLQLMK	2	EAFC(UniMod:4)QLLQLMK2	2735.09	2126.63	1873.68
B0K017	B0K017	B0K017_RAT	Adprs	ADP-ribosylserine hydrolase	1	EAFDEVDMAHR	EAFDEVDMAHR	3	EAFDEVDMAHR3	4121.99	1290.34	
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	EAFEAYSDHTTFK	EAFEAYSDHTTFK	2	EAFEAYSDHTTFK2	6954.27	9275.11	6685.28
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	EAFEAYSDHTTFK	EAFEAYSDHTTFK	3	EAFEAYSDHTTFK3	21864.2	28205.1	42401.9
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	EAFECMR	EAFEC(UniMod:4)MR	2	EAFEC(UniMod:4)MR2	12857.2	6590.37	9845.92
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	EAFEISK	EAFEISK	1	EAFEISK1	73419.4	72965.7	87191.1
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	EAFEISK	EAFEISK	2	EAFEISK2	2.67872e+06	2.55853e+06	2.99153e+06
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	EAFEISKEHMQPTHPIR	EAFEISKEHMQPTHPIR	4	EAFEISKEHMQPTHPIR4	7325.71	7287.69	5015.97
D4A2N2	D4A2N2	D4A2N2_RAT	Inpp5b	phosphoinositide 5-phosphatase	1	EAFFFHDTPK	EAFFFHDTPK	3	EAFFFHDTPK3	11778.8	7526.27	10468.4
Q925N6	Q925N6	IGSF1_RAT	Igsf1	Immunoglobulin superfamily member 1	1	EAFFTIQR	EAFFTIQR	2	EAFFTIQR2	30245.3	33115.3	38802.6
P18395	P18395	CSDE1_RAT	Csde1	Cold shock domain-containing protein E1	1	EAFGFIER	EAFGFIER	2	EAFGFIER2	17320.8		
Q5PPI3	Q5PPI3	GSKIP_RAT	Gskip	GSK3B-interacting protein	1	EAFGNALLQR	EAFGNALLQR	2	EAFGNALLQR2	5365.03	7517.59	4494.21
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	EAFGQAHTNHK	EAFGQAHTNHK	3	EAFGQAHTNHK3			916.124
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	EAFHEFQK	EAFHEFQK	2	EAFHEFQK2	2163.85		2491.6
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EAFLNTEDK	EAFLNTEDK	2	EAFLNTEDK2	667845	641684	692177
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	EAFLQEVWK	EAFLQEVWK	2	EAFLQEVWK2	113249	137572	134589
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	EAFLSEKPGLR	EAFLSEKPGLR	2	EAFLSEKPGLR2	7613.62	5663.97	5525.99
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	EAFLSEKPGLR	EAFLSEKPGLR	3	EAFLSEKPGLR3	94013.1	106387	100686
P83888	P83888	TBG1_RAT	Tubg1	Tubulin gamma-1 chain	1	EAFMEQFRK	EAFMEQFRK	3	EAFMEQFRK3			7596.49
P13832	P13832;Q64122;P18666	MRLCA_RAT	Rlc-a	Myosin regulatory light chain RLC-A	0	EAFNMIDQNR	EAFNMIDQNR	2	EAFNMIDQNR2	1.47215e+06	1.60884e+06	1.66867e+06
P13832	P13832;Q64122;P18666	MRLCA_RAT	Rlc-a	Myosin regulatory light chain RLC-A	0	EAFNMIDQNR	EAFNMIDQNR	3	EAFNMIDQNR3	13610.3	17986.8	18795.7
P13832	P13832	MRLCA_RAT	Rlc-a	Myosin regulatory light chain RLC-A	1	EAFNMIDQNRDGFIDKEDLHDMLASMGK	EAFNMIDQNRDGFIDKEDLHDMLASMGK	4	EAFNMIDQNRDGFIDKEDLHDMLASMGK4		5597.15	8939.31
P11232	P11232	THIO_RAT	Txn	Thioredoxin	1	EAFQEALAAAGDK	EAFQEALAAAGDK	2	EAFQEALAAAGDK2	411629	397613	412937
P11232	P11232	THIO_RAT	Txn	Thioredoxin	1	EAFQEALAAAGDK	EAFQEALAAAGDK	3	EAFQEALAAAGDK3	7780.8	9655.01	11154.9
Q64119	A0A8I6G5X1;Q64119;P16409	MYL6_RAT	Myl6	Myosin light polypeptide 6	0	EAFQLFDR	EAFQLFDR	2	EAFQLFDR2	9.82797e+06	1.03533e+07	1.06448e+07
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	EAFQPQEPDFPPPPPDLEQLR	EAFQPQEPDFPPPPPDLEQLR	3	EAFQPQEPDFPPPPPDLEQLR3	37541.1	48755.7	75713.3
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	EAFQSVVLPAFEK	EAFQSVVLPAFEK	2	EAFQSVVLPAFEK2	43223.1	29800.8	49639
P49088	P49088	ASNS_RAT	Asns	Asparagine synthetase [glutamine-hydrolyzing]	1	EAFSDGITSVK	EAFSDGITSVK	2	EAFSDGITSVK2	8357.3	4467.34	1764.67
A0A0G2K712	A0A0G2K712	A0A0G2K712_RAT	Tbc1d5	TBC1 domain family, member 5	1	EAFSGQAQPLLTLR	EAFSGQAQPLLTLR	2	EAFSGQAQPLLTLR2	13091.9	9323.07	9447.65
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	EAFSLAEFCEEEEEERQGDEDFTK	EAFSLAEFC(UniMod:4)EEEEEERQGDEDFTK	3	EAFSLAEFC(UniMod:4)EEEEEERQGDEDFTK3	1916.82	7591.35	4219.08
P0DP29;P0DP30;P0DP31	P0DP30;A0A8I6GKN5;Q5U206;P0DP29;P0DP31	CALM1_RAT;CALM2_RAT;CALM3_RAT	Calm1;Calm2;Calm3	Calmodulin-1	0	EAFSLFDK	EAFSLFDK	1	EAFSLFDK1	16862.7	15336.7	14110.7
P0DP29;P0DP30;P0DP31	P0DP30;A0A8I6GKN5;Q5U206;P0DP29;P0DP31	CALM1_RAT;CALM2_RAT;CALM3_RAT	Calm1;Calm2;Calm3	Calmodulin-1	0	EAFSLFDK	EAFSLFDK	2	EAFSLFDK2	1.12025e+06	1.19476e+06	1.24694e+06
P0DP29;P0DP30;P0DP31	P0DP30;A0A8I6GKN5;P0DP29;P0DP31	CALM1_RAT;CALM2_RAT;CALM3_RAT	Calm1;Calm2;Calm3	Calmodulin-1	0	EAFSLFDKDGDGTITTK	EAFSLFDKDGDGTITTK	2	EAFSLFDKDGDGTITTK2	246426	286395	243970
P0DP29;P0DP30;P0DP31	P0DP30;A0A8I6GKN5;P0DP29;P0DP31	CALM1_RAT;CALM2_RAT;CALM3_RAT	Calm1;Calm2;Calm3	Calmodulin-1	0	EAFSLFDKDGDGTITTK	EAFSLFDKDGDGTITTK	3	EAFSLFDKDGDGTITTK3	103289	134259	156905
Q2KJ09	Q2KJ09	UBP16_RAT	Usp16	Ubiquitin carboxyl-terminal hydrolase 16	1	EAFSTDECSIQHCLYQFTR	EAFSTDEC(UniMod:4)SIQHC(UniMod:4)LYQFTR	3	EAFSTDEC(UniMod:4)SIQHC(UniMod:4)LYQFTR3	4966.19	7868.17	3708.36
P04466	P04466	MYL11_RAT	Myl11	Myosin regulatory light chain 11	1	EAFTVIDQNR	EAFTVIDQNR	2	EAFTVIDQNR2	12198.3	16621.1	10660.7
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	EAGAGGLAIAVEGPSK	EAGAGGLAIAVEGPSK	2	EAGAGGLAIAVEGPSK2	254677	232498	238061
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	EAGAGGLAIAVEGPSK	EAGAGGLAIAVEGPSK	3	EAGAGGLAIAVEGPSK3	100064	86671.6	95760.6
Q5FWT9	Q5FWT9	SIKE1_RAT	Sike1	Suppressor of IKBKE 1	1	EAGAVLPEQYQEDASDVK	EAGAVLPEQYQEDASDVK	2	EAGAVLPEQYQEDASDVK2	70758.4	62741.7	69742.1
P53563	E9PU78;P53563	B2CL1_RAT	Bcl2l1	Bcl-2-like protein 1	0	EAGDEFELR	EAGDEFELR	2	EAGDEFELR2	43734.1	52669.3	40174.3
D4A9L2	D4A9L2	D4A9L2_RAT	Srsf1	Serine/arginine-rich splicing factor 1	1	EAGDVCYADVYR	EAGDVC(UniMod:4)YADVYR	2	EAGDVC(UniMod:4)YADVYR2	9750.73	8128.51	
A0A0G2K5E4	A0A0G2K5E4	A0A0G2K5E4_RAT	Dnaja3	DnaJ heat shock protein family (Hsp40) member A3	1	EAGEDNEGFLSK	EAGEDNEGFLSK	2	EAGEDNEGFLSK2	2491.09	3148.71	
P30009	P30009	MARCS_RAT	Marcks	Myristoylated alanine-rich C-kinase substrate	1	EAGEGAEAEGATADGAK	EAGEGAEAEGATADGAK	2	EAGEGAEAEGATADGAK2	7639.23	11049	7779.94
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	EAGELKPEEEITVGPVQK	EAGELKPEEEITVGPVQK	2	EAGELKPEEEITVGPVQK2	6271.93	4966.15	
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	EAGELKPEEEITVGPVQK	EAGELKPEEEITVGPVQK	3	EAGELKPEEEITVGPVQK3	92648	98638.3	84667.5
D3ZYS7	D3ZYS7	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	1	EAGEPGDVEPR	EAGEPGDVEPR	2	EAGEPGDVEPR2	99338.6	98490.4	111602
P29266	P29266	3HIDH_RAT	Hibadh	3-hydroxyisobutyrate dehydrogenase, mitochondrial	1	EAGEQVASSPADVAEK	EAGEQVASSPADVAEK	2	EAGEQVASSPADVAEK2	33096.4	27771.7	31753.9
P29266	P29266	3HIDH_RAT	Hibadh	3-hydroxyisobutyrate dehydrogenase, mitochondrial	1	EAGEQVASSPADVAEK	EAGEQVASSPADVAEK	3	EAGEQVASSPADVAEK3	2425.83	2897.17	1957.5
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	EAGFQALEEQNQVEPR	EAGFQALEEQNQVEPR	2	EAGFQALEEQNQVEPR2	41161.4	37029.4	34040.3
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	EAGFQALEEQNQVEPR	EAGFQALEEQNQVEPR	3	EAGFQALEEQNQVEPR3	27784.5	21058.4	19636.2
Q03344	Q03344	ATIF1_RAT	Atp5if1	ATPase inhibitor, mitochondrial	1	EAGGAFGK	EAGGAFGK	1	EAGGAFGK1	23453.9	36060.8	44287.4
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	EAGGNPK	EAGGNPK	1	EAGGNPK1	1005	1536.02	
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	EAGGYFHTLR	EAGGYFHTLR	2	EAGGYFHTLR2	8293.79	5338.74	7557.3
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	EAGGYFHTLR	EAGGYFHTLR	3	EAGGYFHTLR3	79400.9	93811.4	97506.4
D4A9V7	D4A9V7	D4A9V7_RAT	Mars2	Methionine--tRNA ligase, mitochondrial	1	EAGISSTDFIR	EAGISSTDFIR	2	EAGISSTDFIR2			5202.75
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	EAGLAHLCEFIEDCEHTVLATK	EAGLAHLC(UniMod:4)EFIEDC(UniMod:4)EHTVLATK	3	EAGLAHLC(UniMod:4)EFIEDC(UniMod:4)EHTVLATK3		2253.49	7019.94
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	EAGLAHLCEFIEDCEHTVLATK	EAGLAHLC(UniMod:4)EFIEDC(UniMod:4)EHTVLATK	4	EAGLAHLC(UniMod:4)EFIEDC(UniMod:4)EHTVLATK4	38417.8	32896.5	37285.6
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	EAGLDITHICLPPDSGEDEIIDEILK	EAGLDITHIC(UniMod:4)LPPDSGEDEIIDEILK	3	EAGLDITHIC(UniMod:4)LPPDSGEDEIIDEILK3	3346.35	5307.97	
A0A0G2JYJ5	A0A0G2JYJ5	A0A0G2JYJ5_RAT	Ap5z1	Adaptor related protein complex 5 subunit zeta 1	1	EAGLLPG	EAGLLPG	1	EAGLLPG1	14937.3	12658.6	11580.8
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	EAGLQMFGQLAR	EAGLQMFGQLAR	2	EAGLQMFGQLAR2	50508.3	63320.5	42937.5
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	EAGLSFR	EAGLSFR	2	EAGLSFR2	26145.8	35582	36668.6
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	EAGLSNLFGESADDSQESIVFLSTLTR	EAGLSNLFGESADDSQESIVFLSTLTR	3	EAGLSNLFGESADDSQESIVFLSTLTR3	3501.76	6027.79	4955.44
F7EUW3	F7EUW3	F7EUW3_RAT	C2cd2l	C2CD2-like	1	EAGLSQSHDDLSNTTATPSVR	EAGLSQSHDDLSNTTATPSVR	3	EAGLSQSHDDLSNTTATPSVR3	16983.8	18203.2	23862.3
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	EAGLSWR	EAGLSWR	2	EAGLSWR2	209080	265544	263282
D3Z9C0	D3Z9C0	D3Z9C0_RAT	Mios	Meiosis regulator for oocyte development	1	EAGNLEGILLTGLTK	EAGNLEGILLTGLTK	2	EAGNLEGILLTGLTK2	7563.87	7539.68	10260.9
D3ZE05	D3ZE05	D3ZE05_RAT	Cilp2	Cartilage intermediate layer protein 2	1	EAGQNVTFCCK	EAGQNVTFC(UniMod:4)C(UniMod:4)K	2	EAGQNVTFC(UniMod:4)C(UniMod:4)K2	10980.6	9823.7	8971.36
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EAGSVSLR	EAGSVSLR	2	EAGSVSLR2	895501	961005	997760
A0A0G2K8N6	A0A0G2K8N6	A0A0G2K8N6_RAT	Ankmy2	Ankyrin repeat and MYND domain containing 2	1	EAGTLLSSK	EAGTLLSSK	2	EAGTLLSSK2	46319.3	51446.1	52350.5
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	EAGTQPQLQIR	EAGTQPQLQIR	2	EAGTQPQLQIR2	948191	1.03951e+06	901665
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	EAGVELFAIGVK	EAGVELFAIGVK	2	EAGVELFAIGVK2	62300	62762.7	53907.6
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	EAGVFVPR	EAGVFVPR	2	EAGVFVPR2	108761	67804.5	90827.5
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	EAGYTEFTGPPQKPPR	EAGYTEFTGPPQKPPR	3	EAGYTEFTGPPQKPPR3	72021.6	80651.5	76414
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EAHDAFR	EAHDAFR	1	EAHDAFR1	2394.41	5211.97	2915.84
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EAHDAFR	EAHDAFR	2	EAHDAFR2	167608	86495.7	86988.2
Q9WTV0	Q9WTV0	PREB_RAT	Preb	Prolactin regulatory element-binding protein	1	EAHGIVVTDVTFLPEK	EAHGIVVTDVTFLPEK	3	EAHGIVVTDVTFLPEK3	5894.5	8586.98	7117.22
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	EAHGVLEGFQPSGR	EAHGVLEGFQPSGR	2	EAHGVLEGFQPSGR2	8293.65	3865.48	
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	EAHGVLEGFQPSGR	EAHGVLEGFQPSGR	3	EAHGVLEGFQPSGR3	428912	381992	369222
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	EAHISYSQDADDR	EAHISYSQDADDR	2	EAHISYSQDADDR2	1363.85	2027.94	3910.35
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	EAHISYSQDADDR	EAHISYSQDADDR	3	EAHISYSQDADDR3	18643.5	17638	13986.5
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	EAHPMPLEAEAPGVNLGTLPEGR	EAHPMPLEAEAPGVNLGTLPEGR	3	EAHPMPLEAEAPGVNLGTLPEGR3	58489.9	75507.6	64843
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	EAHSDDNPSEGDGAVR	EAHSDDNPSEGDGAVR	3	EAHSDDNPSEGDGAVR3	19358.1		22655.9
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	EAHSDDNPSEGDGAVRK	EAHSDDNPSEGDGAVRK	2	EAHSDDNPSEGDGAVRK2			887.706
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	EAHSDDNPSEGDGAVRK	EAHSDDNPSEGDGAVRK	3	EAHSDDNPSEGDGAVRK3			16401.5
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	EAHSDDNPSEGDGAVRK	EAHSDDNPSEGDGAVRK	4	EAHSDDNPSEGDGAVRK4			27770.1
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	EAHTTISSNDR	EAHTTISSNDR	3	EAHTTISSNDR3			11333.2
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	EAIAALLEK	EAIAALLEK	2	EAIAALLEK2	103242	123912	90671.7
A0A0G2JYJ8	A0A0G2JYJ8	A0A0G2JYJ8_RAT	Ttc23l	Tetratricopeptide repeat domain 23-like	1	EAIALLR	EAIALLR	2	EAIALLR2	28887.6		
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EAICEVALDYK	EAIC(UniMod:4)EVALDYK	2	EAIC(UniMod:4)EVALDYK2	179670	162846	150927
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EAICEVALDYKK	EAIC(UniMod:4)EVALDYKK	2	EAIC(UniMod:4)EVALDYKK2	7000.8	7990.45	3601.93
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EAICEVALDYKK	EAIC(UniMod:4)EVALDYKK	3	EAIC(UniMod:4)EVALDYKK3	50056.9	49948.5	45065.5
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	EAICSSLK	EAIC(UniMod:4)SSLK	2	EAIC(UniMod:4)SSLK2	21945.2	13268.7	19453.4
D3ZAN2	D3ZAN2	D3ZAN2_RAT	Cdhr2	Cadherin-related family member 2	1	EAIDPALEGR	EAIDPALEGR	2	EAIDPALEGR2		3839.75	
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	EAIDSPVSFLALHNQIR	EAIDSPVSFLALHNQIR	3	EAIDSPVSFLALHNQIR3	32406.1	40827.6	28831.5
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	EAIDSYIK	EAIDSYIK	1	EAIDSYIK1	9579.55	9256.68	12573.5
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	EAIDSYIK	EAIDSYIK	2	EAIDSYIK2	1.14329e+06	1.25249e+06	1.34124e+06
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	EAIEDLPGK	EAIEDLPGK	2	EAIEDLPGK2	70264.3	65920.1	53570.6
P62282	P62282;A0A8I5Y1A5	RS11_RAT	Rps11	Small ribosomal subunit protein uS17	0	EAIEGTYIDK	EAIEGTYIDK	2	EAIEGTYIDK2	40334.1	47325.7	34330.6
P62282	P62282;A0A8I5Y1A5	RS11_RAT	Rps11	Small ribosomal subunit protein uS17	0	EAIEGTYIDKK	EAIEGTYIDKK	3	EAIEGTYIDKK3	19191.4	10269.9	11033.4
Q63663	Q63663	GBP2_RAT	Gbp2	Guanylate-binding protein 2	1	EAIEIFLK	EAIEIFLK	2	EAIEIFLK2	23967.7	23496.1	22162
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	EAIEMHENNGSTK	EAIEMHENNGSTK	3	EAIEMHENNGSTK3	4339.55	5451.58	6288.73
Q9Z336	Q9Z336	DYLT1_RAT	Dynlt1	Dynein light chain Tctex-type 1	1	EAIESAIGGNAYQHSK	EAIESAIGGNAYQHSK	2	EAIESAIGGNAYQHSK2	12861.3	11675.9	15735
Q9Z336	Q9Z336	DYLT1_RAT	Dynlt1	Dynein light chain Tctex-type 1	1	EAIESAIGGNAYQHSK	EAIESAIGGNAYQHSK	3	EAIESAIGGNAYQHSK3	72901.1	58384.6	80073.4
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	EAIIPGSVYDR	EAIIPGSVYDR	2	EAIIPGSVYDR2	55155.6	59431.4	59894.2
P14046	Q6IE52;A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	EAIKEDNSIHWER	EAIKEDNSIHWER	2	EAIKEDNSIHWER2	68920.3	61824	35577.4
P14046	Q6IE52;A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	EAIKEDNSIHWER	EAIKEDNSIHWER	3	EAIKEDNSIHWER3	1.00296e+06	890710	924797
P14046	Q6IE52;A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	EAIKEDNSIHWER	EAIKEDNSIHWER	4	EAIKEDNSIHWER4	1.93715e+06	1.85954e+06	1.91663e+06
P14046	Q6IE52;A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	EAIKEDNSIHWERPQK	EAIKEDNSIHWERPQK	3	EAIKEDNSIHWERPQK3	7637.64		
P14046	Q6IE52;A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	EAIKEDNSIHWERPQK	EAIKEDNSIHWERPQK	4	EAIKEDNSIHWERPQK4	26530.2	24919.9	
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	EAILAIHK	EAILAIHK	1	EAILAIHK1	2912.54	846.379	
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	EAILAIHK	EAILAIHK	2	EAILAIHK2	246467	223646	246352
A0A8I6A9E8	A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	1	EAILDNDFMK	EAILDNDFMK	2	EAILDNDFMK2	34415.5	26436.3	24727.8
B0BNJ4	B0BNJ4	B0BNJ4_RAT	Ethe1	ETHE1, persulfide dioxygenase	1	EAILIDPVLETAHR	EAILIDPVLETAHR	2	EAILIDPVLETAHR2	6850.31	2328.31	7019.37
B0BNJ4	B0BNJ4	B0BNJ4_RAT	Ethe1	ETHE1, persulfide dioxygenase	1	EAILIDPVLETAHR	EAILIDPVLETAHR	3	EAILIDPVLETAHR3	28226.1	25919.6	38003.6
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	EAINLLEPMTNDPVNYVR	EAINLLEPMTNDPVNYVR	3	EAINLLEPMTNDPVNYVR3	46822.1	51266.3	52048.4
P49432	P49432	ODPB_RAT	Pdhb	Pyruvate dehydrogenase E1 component subunit beta, mitochondrial	1	EAINQGMDEELER	EAINQGMDEELER	2	EAINQGMDEELER2	3197.15	4316.7	6419.54
P49432	P49432	ODPB_RAT	Pdhb	Pyruvate dehydrogenase E1 component subunit beta, mitochondrial	1	EAINQGMDEELERDEK	EAINQGMDEELERDEK	2	EAINQGMDEELERDEK2	2013.61	2191.5	
P49432	P49432	ODPB_RAT	Pdhb	Pyruvate dehydrogenase E1 component subunit beta, mitochondrial	1	EAINQGMDEELERDEK	EAINQGMDEELERDEK	3	EAINQGMDEELERDEK3	65824.7	52252	75932.4
A0A0G2K0G9	A0A0G2K0G9	A0A0G2K0G9_RAT	Rin3	Ras and Rab interactor 3	1	EAINSSLLEIHSR	EAINSSLLEIHSR	3	EAINSSLLEIHSR3	12866.4	10647.3	7483.5
Q9Z2P6	Q9Z2P6	SNP29_RAT	Snap29	Synaptosomal-associated protein 29	1	EAINTSK	EAINTSK	2	EAINTSK2	54423.2		56221.1
P09527	P09527	RAB7A_RAT	Rab7a	Ras-related protein Rab-7a	1	EAINVEQAFQTIAR	EAINVEQAFQTIAR	2	EAINVEQAFQTIAR2	173774	185430	193328
P09527	P09527	RAB7A_RAT	Rab7a	Ras-related protein Rab-7a	1	EAINVEQAFQTIAR	EAINVEQAFQTIAR	3	EAINVEQAFQTIAR3	156147	130290	136412
A0A8I6A8L3	A0A8I6A8L3	A0A8I6A8L3_RAT	Dnpep	Aspartyl aminopeptidase	1	EAIQATAR	EAIQATAR	2	EAIQATAR2	39476.6	40301.7	37782.8
A0A0G2JXI6	A0A0G2JXI6	A0A0G2JXI6_RAT	Cyrib	CYFIP related Rac1 interactor B	1	EAIQHPADEK	EAIQHPADEK	2	EAIQHPADEK2			3615.82
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	EAIQLVNTR	EAIQLVNTR	2	EAIQLVNTR2	24524.7	16614.1	15349.1
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	EAIQLVNTREEVEDLCR	EAIQLVNTREEVEDLC(UniMod:4)R	3	EAIQLVNTREEVEDLC(UniMod:4)R3	13151.9	21728.3	16241.7
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	EAIQLVNTREEVEDLCR	EAIQLVNTREEVEDLC(UniMod:4)R	4	EAIQLVNTREEVEDLC(UniMod:4)R4		9380.33	17425.1
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	EAIREDNSIHWER	EAIREDNSIHWER	4	EAIREDNSIHWER4	25929.1	19844.2	8148.45
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	EAISALHFCETFTR	EAISALHFC(UniMod:4)ETFTR	2	EAISALHFC(UniMod:4)ETFTR2	3154.79		
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	EAISALHFCETFTR	EAISALHFC(UniMod:4)ETFTR	3	EAISALHFC(UniMod:4)ETFTR3	76813.4	68924.1	84431.5
Q5M824	Q5M824	SHC1_RAT	Shc1	SHC-transforming protein 1	1	EAISLVCEAVPGAK	EAISLVC(UniMod:4)EAVPGAK	2	EAISLVC(UniMod:4)EAVPGAK2	4592.96	2988.82	
E9PU02	E9PU02	E9PU02_RAT	Trappc9	Trafficking protein particle complex subunit 9	1	EAISYYSK	EAISYYSK	2	EAISYYSK2	8571.51	9359.58	8294.25
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	EAIVESDSEEENYKVPEYK	EAIVESDSEEENYKVPEYK	3	EAIVESDSEEENYKVPEYK3	24242.2	31994.7	31200.7
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	EAIVNSCVFVHQTLHQANAR	EAIVNSC(UniMod:4)VFVHQTLHQANAR	3	EAIVNSC(UniMod:4)VFVHQTLHQANAR3	27067.6	37465.4	26331.3
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	EAIVNSCVFVHQTLHQANAR	EAIVNSC(UniMod:4)VFVHQTLHQANAR	4	EAIVNSC(UniMod:4)VFVHQTLHQANAR4	18641.2	26615.9	29008.2
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	EAIVTDLDPGR	EAIVTDLDPGR	2	EAIVTDLDPGR2	239766	258457	263829
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	EAIVTDLDPGRK	EAIVTDLDPGRK	2	EAIVTDLDPGRK2	90571.9	87744.9	93190.3
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	EAIVTDLDPGRK	EAIVTDLDPGRK	3	EAIVTDLDPGRK3	504701	609640	555040
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EAIVTSEELGQDLEHVEVLQK	EAIVTSEELGQDLEHVEVLQK	3	EAIVTSEELGQDLEHVEVLQK3	36268.6	47363.5	56273.6
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	EAKPDELMDSK	EAKPDELMDSK	2	EAKPDELMDSK2	74975.9	63838.9	58897.9
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	EAKPDELMDSK	EAKPDELMDSK	3	EAKPDELMDSK3	378751	359572	381173
Q9Z269	Q9Z269	VAPB_RAT	Vapb	Vesicle-associated membrane protein-associated protein B	1	EAKPEDLMDSK	EAKPEDLMDSK	2	EAKPEDLMDSK2	37221.1	36812.5	28866.5
Q9Z269	Q9Z269	VAPB_RAT	Vapb	Vesicle-associated membrane protein-associated protein B	1	EAKPEDLMDSK	EAKPEDLMDSK	3	EAKPEDLMDSK3	70288.8	88772.9	89231.5
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	EAKPEPMEEDLPENK	EAKPEPMEEDLPENK	3	EAKPEPMEEDLPENK3	9239.76	1246.55	1884.18
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	EAKPEPMEEDLPENKK	EAKPEPMEEDLPENKK	4	EAKPEPMEEDLPENKK4	4665.24		
D3ZX06	D3ZX06	D3ZX06_RAT	Ghdc	GH3 domain containing	1	EALAACPSSSCPEMPR	EALAAC(UniMod:4)PSSSC(UniMod:4)PEMPR	2	EALAAC(UniMod:4)PSSSC(UniMod:4)PEMPR2	4974.04	6720.28	3587.69
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	EALAAEDR	EALAAEDR	2	EALAAEDR2	32725.5	35577.7	26734.8
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	EALAAVLTYAKPDEFSALCDLLGAR	EALAAVLTYAKPDEFSALC(UniMod:4)DLLGAR	3	EALAAVLTYAKPDEFSALC(UniMod:4)DLLGAR3	8956.07		12556.8
D3ZQQ1	D3ZQQ1	D3ZQQ1_RAT	Aftph	Aftiphilin	1	EALAECGELR	EALAEC(UniMod:4)GELR	2	EALAEC(UniMod:4)GELR2	2335.68	8264.06	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	EALAGLLEAYPNSQEAENWR	EALAGLLEAYPNSQEAENWR	3	EALAGLLEAYPNSQEAENWR3	9980.04	9186.83	9109.72
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	EALAGLLEAYPNSQEAENWRK	EALAGLLEAYPNSQEAENWRK	3	EALAGLLEAYPNSQEAENWRK3	7628.9	7953.39	8076.1
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	EALALANGTPR	EALALANGTPR	2	EALALANGTPR2	25727.1	31275.1	26886.4
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	EALALCTDR	EALALC(UniMod:4)TDR	2	EALALC(UniMod:4)TDR2	7482.38	3173.87	8222.81
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	EALALCTDRDLQEMGIPLGPR	EALALC(UniMod:4)TDRDLQEMGIPLGPR	3	EALALC(UniMod:4)TDRDLQEMGIPLGPR3	8365.93	11715.6	11982.1
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	EALALEEDITSQK	EALALEEDITSQK	2	EALALEEDITSQK2		8572.89	
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	EALALLR	EALALLR	2	EALALLR2		25152.3	24928.3
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	EALDDVTLPR	EALDDVTLPR	2	EALDDVTLPR2	18293.5	11110.8	13287.8
B1H219	B1H219	B1H219_RAT	Dkk3	Dickkopf WNT signaling pathway inhibitor 3	1	EALDDYEDVGFIGEVR	EALDDYEDVGFIGEVR	2	EALDDYEDVGFIGEVR2	44985.5	44476.7	59854.4
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	EALDEETAAK	EALDEETAAK	2	EALDEETAAK2	27564.1	24455.8	19357.3
D3ZAQ0	D3ZAQ0	D3ZAQ0_RAT	Fundc2	FUN14 domain containing 2	1	EALDLAEFTR	EALDLAEFTR	2	EALDLAEFTR2	43617.8	48117	63867.5
A0A8I6AP98	A0A0G2K8S3;A0A8I6AP98	A0A8I6AP98_RAT	Mettl27	Methyltransferase like 27	0	EALEAALDSLEQAGAWER	EALEAALDSLEQAGAWER	2	EALEAALDSLEQAGAWER2	7681.96	2746.55	4143.35
A0A8I6AP98	A0A0G2K8S3;A0A8I6AP98	A0A8I6AP98_RAT	Mettl27	Methyltransferase like 27	0	EALEAALDSLEQAGAWER	EALEAALDSLEQAGAWER	3	EALEAALDSLEQAGAWER3	6821	4309.12	5799.99
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	EALEALVPVTIEVEVPFDLHR	EALEALVPVTIEVEVPFDLHR	3	EALEALVPVTIEVEVPFDLHR3	6248.48		8796.71
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	EALEAVEGLVR	EALEAVEGLVR	2	EALEAVEGLVR2	161929	171868	180677
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	EALEAVEGLVR	EALEAVEGLVR	3	EALEAVEGLVR3	5134.67	4098.61	7733.48
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	EALEEAEK	EALEEAEK	2	EALEEAEK2	68841.3	73624.4	72057.6
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	EALEGILIR	EALEGILIR	2	EALEGILIR2	7058.69	2445.09	7488.11
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	EALEHLCTYEK	EALEHLC(UniMod:4)TYEK	2	EALEHLC(UniMod:4)TYEK2	2049.52	2541.23	3070.79
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	EALEHLCTYEK	EALEHLC(UniMod:4)TYEK	3	EALEHLC(UniMod:4)TYEK3	33681.9	30289.6	19857.9
E9PU03	E9PU03	E9PU03_RAT	Smg5	Nonsense-mediated mRNA decay factor	1	EALEKEEPEPEPPTVVPQADEGRK	EALEKEEPEPEPPTVVPQADEGRK	4	EALEKEEPEPEPPTVVPQADEGRK4	14988.5	10430.5	
P04764	M0R5J4;A0A8I6GJ97;P04764	ENOA_RAT	Eno1	Alpha-enolase	0	EALELLK	EALELLK	1	EALELLK1	12287.1	12138.4	12623.9
P04764	M0R5J4;A0A8I6GJ97;P04764	ENOA_RAT	Eno1	Alpha-enolase	0	EALELLK	EALELLK	2	EALELLK2	344458	338139	371645
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	EALELTDTGLLSGSEER	EALELTDTGLLSGSEER	2	EALELTDTGLLSGSEER2	43851.9	50680.9	54406.6
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	EALELTDTGLLSGSEER	EALELTDTGLLSGSEER	3	EALELTDTGLLSGSEER3	6518.65	10302.6	16998.9
A0A8I5ZP83	D4A9Z8;A0A8I5ZP83	A0A8I5ZP83_RAT	Chmp4b	Charged multivesicular body protein 4B	0	EALENANTNTEVLK	EALENANTNTEVLK	2	EALENANTNTEVLK2	120214	143901	125789
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	EALENTDSATQMMILNCIYFK	EALENTDSATQMMILNC(UniMod:4)IYFK	3	EALENTDSATQMMILNC(UniMod:4)IYFK3	165211	129239	136626
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	EALEYKDREDYVPYTGEK	EALEYKDREDYVPYTGEK	3	EALEYKDREDYVPYTGEK3	44630.3	51804.2	37538.8
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	EALEYKDREDYVPYTGEK	EALEYKDREDYVPYTGEK	4	EALEYKDREDYVPYTGEK4	179432	236511	237656
A0A0G2K435	A0A0G2K435	A0A0G2K435_RAT	Dnajc7	DnaJ heat shock protein family (Hsp40) member C7	1	EALGDAQQSVR	EALGDAQQSVR	2	EALGDAQQSVR2	4102.24	5185.99	3238.27
A0A0G2K7W5	A0A0G2K7W5	A0A0G2K7W5_RAT	Ahsa2	Activator of HSP90 ATPase homolog 2	1	EALGEYLK	EALGEYLK	2	EALGEYLK2	3987.55	7402.64	9670.18
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	EALGGPAWDYR	EALGGPAWDYR	2	EALGGPAWDYR2	6406.25	2506.03	6309.9
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	EALGHSIAQLNAENNHTFYFK	EALGHSIAQLNAENNHTFYFK	4	EALGHSIAQLNAENNHTFYFK4	7813.6	7545.12	10219.8
P01048	P01048	KNT1_RAT	Map1	T-kininogen 1	1	EALGHSIAQLNAQHNHIFYFK	EALGHSIAQLNAQHNHIFYFK	3	EALGHSIAQLNAQHNHIFYFK3	9608.22	18685.2	11025.6
P01048	P01048	KNT1_RAT	Map1	T-kininogen 1	1	EALGHSIAQLNAQHNHIFYFK	EALGHSIAQLNAQHNHIFYFK	4	EALGHSIAQLNAQHNHIFYFK4	148947	144704	157411
A0A0G2KA54	P08932;A0A0G2KA54	A0A0G2KA54_RAT	Kng1	Kininogen 1	0	EALGHSIAQLNAQHNHLFYFK	EALGHSIAQLNAQHNHLFYFK	3	EALGHSIAQLNAQHNHLFYFK3	22087.2	18400.5	8505.98
A0A0G2KA54	P08932;A0A0G2KA54	A0A0G2KA54_RAT	Kng1	Kininogen 1	0	EALGHSIAQLNAQHNHLFYFK	EALGHSIAQLNAQHNHLFYFK	4	EALGHSIAQLNAQHNHLFYFK4	105122	128015	120437
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	EALGHWLGLLNADGWIGR	EALGHWLGLLNADGWIGR	3	EALGHWLGLLNADGWIGR3	16893.3	17146.1	8152.83
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	EALHATVDLTK	EALHATVDLTK	2	EALHATVDLTK2	2241.6	2704.93	
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	EALHATVDLTK	EALHATVDLTK	3	EALHATVDLTK3	12818.8	6046.38	16734.7
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	EALICPTCNVTIHNR	EALIC(UniMod:4)PTC(UniMod:4)NVTIHNR	2	EALIC(UniMod:4)PTC(UniMod:4)NVTIHNR2	6848.47	13467.7	10449.3
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	EALICPTCNVTIHNR	EALIC(UniMod:4)PTC(UniMod:4)NVTIHNR	3	EALIC(UniMod:4)PTC(UniMod:4)NVTIHNR3	336852	332592	313957
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	EALIQFLEQVHQGIK	EALIQFLEQVHQGIK	2	EALIQFLEQVHQGIK2	261211	159042	100643
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	EALIQFLEQVHQGIK	EALIQFLEQVHQGIK	3	EALIQFLEQVHQGIK3	1.80991e+06	1.02422e+06	965670
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	EALISGWLFFR	EALISGWLFFR	2	EALISGWLFFR2	6337.28	7855.61	4997.08
Q6PEB9	Q6PEB9	CC127_RAT	Ccdc127	Coiled-coil domain-containing protein 127	1	EALISQGR	EALISQGR	2	EALISQGR2	19490.6	17834.2	14564.1
Q9WVS2	Q9WVS2	OSGEP_RAT	Osgep	tRNA N6-adenosine threonylcarbamoyltransferase	1	EALIVGGVGCNVR	EALIVGGVGC(UniMod:4)NVR	2	EALIVGGVGC(UniMod:4)NVR2	5404.13	5423.09	4617.94
P70483	P70483	STRN_RAT	Strn	Striatin	1	EALKEFDFLVASEEGDNESR	EALKEFDFLVASEEGDNESR	3	EALKEFDFLVASEEGDNESR3	34899.6	30217.9	46190.5
O35763	O35763	MOES_RAT	Msn	Moesin	1	EALLQASR	EALLQASR	2	EALLQASR2	210059	216334	235508
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	EALLSSAVDHGSDEVK	EALLSSAVDHGSDEVK	2	EALLSSAVDHGSDEVK2	37163.7	31158.7	28035.1
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	EALLSSAVDHGSDEVK	EALLSSAVDHGSDEVK	3	EALLSSAVDHGSDEVK3	711302	777494	766013
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	EALLTFMEQVHR	EALLTFMEQVHR	3	EALLTFMEQVHR3	19730.2	19923.7	15248.9
A0A8I5ZTH4	A0A0G2K749;A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	0	EALNILK	EALNILK	2	EALNILK2	58812.5	47386.8	50785.9
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	EALNIYAR	EALNIYAR	2	EALNIYAR2	39042.7	38866.8	34465.8
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	EALNLAQMQEQTLQLEQQSK	EALNLAQMQEQTLQLEQQSK	3	EALNLAQMQEQTLQLEQQSK3	18587.2	15822.2	21030.2
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	EALNSEGVDR	EALNSEGVDR	2	EALNSEGVDR2	11375.4	13518.6	9727.65
A0A8I6AW91	A0A8I6AW91	A0A8I6AW91_RAT	Srp72	Signal recognition particle subunit SRP72	1	EALNVINTHTK	EALNVINTHTK	3	EALNVINTHTK3	5259.9	4433.68	5860.72
Q3MIB4	Q3MIB4	LONP2_RAT	Lonp2	Lon protease homolog 2, peroxisomal	1	EALPDILTSIIR	EALPDILTSIIR	2	EALPDILTSIIR2	3968.42		3940.06
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	EALPMDTEVYESPYADPEEIRPK	EALPMDTEVYESPYADPEEIRPK	3	EALPMDTEVYESPYADPEEIRPK3	48372.3	40496.2	46066.1
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	EALPTWDK	EALPTWDK	2	EALPTWDK2	129541	102788	128988
D3ZZL9	D3ZZL9	GCC2_RAT	Gcc2	GRIP and coiled-coil domain-containing protein 2	1	EALQCDILEMK	EALQC(UniMod:4)DILEMK	2	EALQC(UniMod:4)DILEMK2	7385.38	2342.73	4138.42
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	EALQDVEDENQ	EALQDVEDENQ	2	EALQDVEDENQ2	628394	638878	671821
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	EALQEQLEER	EALQEQLEER	2	EALQEQLEER2	7743.54	12617.6	11430.7
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	EALQLMATYLPK	EALQLMATYLPK	2	EALQLMATYLPK2	131364	139969	172855
A0A0G2K012	A0A0G2K012	A0A0G2K012_RAT	Ubxn6	UBX domain protein 6	1	EALQNDWLPFELR	EALQNDWLPFELR	2	EALQNDWLPFELR2		8983.27	13750.8
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	EALQPLINR	EALQPLINR	2	EALQPLINR2	77800.9	84506	72598.4
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	EALQQEGGQQQQVASEK	EALQQEGGQQQQVASEK	2	EALQQEGGQQQQVASEK2	3236.23	1195.58	1743.76
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	EALQQEGGQQQQVASEK	EALQQEGGQQQQVASEK	3	EALQQEGGQQQQVASEK3	3096.23	1935.08	1879.1
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	EALSAATAQAAEK	EALSAATAQAAEK	2	EALSAATAQAAEK2	19920.2	26072.3	19260.8
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	EALSFVSLIDGYYR	EALSFVSLIDGYYR	2	EALSFVSLIDGYYR2	23677.1	20416.3	21796.6
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	EALSFVSLIDGYYR	EALSFVSLIDGYYR	3	EALSFVSLIDGYYR3		4315.45	
Q4V8B7	Q4V8B7	HSDL1_RAT	Hsdl1	Inactive hydroxysteroid dehydrogenase-like protein 1	1	EALSSQA	EALSSQA	1	EALSSQA1	26548.3	24841.8	30082.1
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	EALSSWLQDGVDGFQVR	EALSSWLQDGVDGFQVR	2	EALSSWLQDGVDGFQVR2	32023.1	21284	27927.3
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	EALSSWLQDGVDGFQVR	EALSSWLQDGVDGFQVR	3	EALSSWLQDGVDGFQVR3	15471.7	7813.79	6451.58
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	EALSTATVQAAER	EALSTATVQAAER	2	EALSTATVQAAER2	10497.6	24102.5	16571.5
P41243	P41243	MATK_RAT	Matk	Megakaryocyte-associated tyrosine-protein kinase	1	EALSTDPK	EALSTDPK	2	EALSTDPK2	33042.5	23651.4	23557.6
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	EALTETTLR	EALTETTLR	2	EALTETTLR2	79005	90478.4	83273.3
P09215	P09215	KPCD_RAT	Prkcd	Protein kinase C delta type	1	EALTTDR	EALTTDR	2	EALTTDR2		46190.2	
Q5XI72	Q5XI72	IF4H_RAT	Eif4h	Eukaryotic translation initiation factor 4H	1	EALTYDGALLGDR	EALTYDGALLGDR	2	EALTYDGALLGDR2	24361.7	26423.2	39617.6
P13107	P13107;A0A8I5ZZ08;G3V9D2	CP2B3_RAT	Cyp2b3	Cytochrome P450 2B3	0	EALVDHAEAFSGR	EALVDHAEAFSGR	3	EALVDHAEAFSGR3	5883.06	3300.07	2467.1
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	EALVDTLTGILSPVQEVR	EALVDTLTGILSPVQEVR	2	EALVDTLTGILSPVQEVR2	30851.5	26701.8	25049.9
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	EALVDTLTGILSPVQEVR	EALVDTLTGILSPVQEVR	3	EALVDTLTGILSPVQEVR3	44952.4	44378	39187.9
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	EALVEPASESPR	EALVEPASESPR	2	EALVEPASESPR2	52988.2	49073.4	38250.7
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	EALVEPASESPRPALAR	EALVEPASESPRPALAR	3	EALVEPASESPRPALAR3	404227	417250	383890
Q499N5	Q499N5	ACSF2_RAT	Acsf2	Medium-chain acyl-CoA ligase ACSF2, mitochondrial	1	EALVIIHENIR	EALVIIHENIR	3	EALVIIHENIR3	5200.71	6134.72	8337.39
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	EALVPFK	EALVPFK	2	EALVPFK2	21978.7	20063.5	21209.2
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	EALVSQMR	EALVSQMR	2	EALVSQMR2	53809.2	39505.9	48807.6
A0A8I6AE91	A0A8I6AE91	A0A8I6AE91_RAT	Gga2	Golgi associated, gamma adaptin ear containing, ARF binding protein 2	1	EALYALTVLEICMNHCGEK	EALYALTVLEIC(UniMod:4)MNHC(UniMod:4)GEK	3	EALYALTVLEIC(UniMod:4)MNHC(UniMod:4)GEK3		4694.47	
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	EALYFSLTNTEQSVK	EALYFSLTNTEQSVK	2	EALYFSLTNTEQSVK2	12215.4	8333.79	10420
B2RZ97	B2RZ97	B2RZ97_RAT	Kcmf1	E3 ubiquitin-protein ligase KCMF1	1	EAMDPIAELLSQLSGVR	EAMDPIAELLSQLSGVR	2	EAMDPIAELLSQLSGVR2	2962.92		
B2RZ97	B2RZ97	B2RZ97_RAT	Kcmf1	E3 ubiquitin-protein ligase KCMF1	1	EAMDPIAELLSQLSGVR	EAMDPIAELLSQLSGVR	3	EAMDPIAELLSQLSGVR3		3491.33	4043.23
Q3B7U1	Q3B7U1	Q3B7U1_RAT	Maged2	MAGE family member D2	1	EAMEADLK	EAMEADLK	2	EAMEADLK2		65295.6	49096.5
Q68FQ9	Q68FQ9	Q68FQ9_RAT	Lancl2	LanC lantibiotic synthetase component C-like 2 (Bacterial)	1	EAMECSDVIWQR	EAMEC(UniMod:4)SDVIWQR	2	EAMEC(UniMod:4)SDVIWQR2	11995.4	5578.54	8885.07
P13383	P13383	NUCL_RAT	Ncl	Nucleolin	1	EAMEDGEIDGNK	EAMEDGEIDGNK	2	EAMEDGEIDGNK2	1140.99	3258.44	
F7FH41	F7FH41	F7FH41_RAT	Csnk2a2	Casein kinase 2 alpha 2	1	EAMEHPYFYPVVK	EAMEHPYFYPVVK	3	EAMEHPYFYPVVK3	51708.1	35866.2	35385.9
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	EAMEHPYFYTVVK	EAMEHPYFYTVVK	2	EAMEHPYFYTVVK2	13325.5	7859.48	14563.6
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	EAMEHPYFYTVVK	EAMEHPYFYTVVK	3	EAMEHPYFYTVVK3	40446.6	37953.7	48531.1
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	EAMFALPAEK	EAMFALPAEK	2	EAMFALPAEK2	193083	219363	231132
Q63483	Q63483	Q63483_RAT	Rab38	Ras-related protein Rab	1	EAMGAFIVFDVTRPATFEAVAK	EAMGAFIVFDVTRPATFEAVAK	3	EAMGAFIVFDVTRPATFEAVAK3	26750.8	23591.2	34971.1
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	EAMLLQATDDVLR	EAMLLQATDDVLR	2	EAMLLQATDDVLR2	701628	641404	676189
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	EAMLLQATDDVLR	EAMLLQATDDVLR	3	EAMLLQATDDVLR3	15524.1	24869.3	23214.6
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	EAMLLQATDDVLRGELQR	EAMLLQATDDVLRGELQR	3	EAMLLQATDDVLRGELQR3	61479.7	70591.4	62842.5
P97943	P97943	SCRB1_RAT	Scarb1	Scavenger receptor class B member 1	1	EAMQAYSESLMSPAAK	EAMQAYSESLMSPAAK	2	EAMQAYSESLMSPAAK2	3825.66	13639.1	8098.03
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	EAMSAYNSHEEGR	EAMSAYNSHEEGR	3	EAMSAYNSHEEGR3	8877.53	16221.9	15080.6
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	EAMSLVENLPCISCASNR	EAMSLVENLPC(UniMod:4)ISC(UniMod:4)ASNR	3	EAMSLVENLPC(UniMod:4)ISC(UniMod:4)ASNR3	13717	14621.6	19406.7
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	EAMVAFCNAAIAR	EAMVAFC(UniMod:4)NAAIAR	2	EAMVAFC(UniMod:4)NAAIAR2	7404.67	7462.83	7494.79
D3ZIT4	D3ZIT4	D3ZIT4_RAT	Anapc7	Anaphase promoting complex subunit 7	1	EAMVMANNVYK	EAMVMANNVYK	2	EAMVMANNVYK2	7824.48	10773	10340.4
Q9Z2X5	Q9Z2X5	HOME3_RAT	Homer3	Homer protein homolog 3	1	EANAAATQWR	EANAAATQWR	2	EANAAATQWR2	35375.3		
D4A7I8	D4A7I8	D4A7I8_RAT	Sumf1	Sulfatase modifying factor 1	1	EANAQGLTSGPR	EANAQGLTSGPR	2	EANAQGLTSGPR2	6317.52	6670.46	4697.09
A0A8J8Y8J8	A0A8J8Y8J8	A0A8J8Y8J8_RAT	Ostm1	Osteoclastogenesis associated transmembrane protein 1	1	EANCANCLTK	EANC(UniMod:4)ANC(UniMod:4)LTK	2	EANC(UniMod:4)ANC(UniMod:4)LTK2	3226.35	3763.76	6884.59
E9PU28	D3ZLZ7;E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	0	EANEILQR	EANEILQR	2	EANEILQR2	118640	107396	105838
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EANELQQWINEK	EANELQQWINEK	2	EANELQQWINEK2	480129	494502	518292
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EANELQQWINEK	EANELQQWINEK	3	EANELQQWINEK3	6652.51	6292.54	5387.97
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	EANEMHTLLQLECEK	EANEMHTLLQLEC(UniMod:4)EK	3	EANEMHTLLQLEC(UniMod:4)EK3	8082.6	9695.49	5412.23
P11505	P11505	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	1	EANHDGDFGITLAELR	EANHDGDFGITLAELR	3	EANHDGDFGITLAELR3	10951.7	21818.3	21909
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	EANHNVSAPYGR	EANHNVSAPYGR	2	EANHNVSAPYGR2	11042.1	10531.6	3918.02
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	EANHNVSAPYGR	EANHNVSAPYGR	3	EANHNVSAPYGR3	135590	167331	105585
Q6P6R2	Q6P6R2	DLDH_RAT	Dld	Dihydrolipoyl dehydrogenase, mitochondrial	1	EANLAASFGK	EANLAASFGK	2	EANLAASFGK2	23627.7	19320.3	23755.5
Q6P6R2	Q6P6R2	DLDH_RAT	Dld	Dihydrolipoyl dehydrogenase, mitochondrial	1	EANLAASFGKPINF	EANLAASFGKPINF	2	EANLAASFGKPINF2	31866.3	48563.9	60387.5
Q8R4A1	Q8R4A1	ERO1A_RAT	Ero1a	ERO1-like protein alpha	1	EANLLEECEQAER	EANLLEEC(UniMod:4)EQAER	2	EANLLEEC(UniMod:4)EQAER2	44024.2	34940.9	38552
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	EANLLNAVIVQR	EANLLNAVIVQR	2	EANLLNAVIVQR2	89711.1	105085	91159.3
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	EANLLNAVIVQR	EANLLNAVIVQR	3	EANLLNAVIVQR3	34616.8	37119.9	42301.5
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	EANMEGIVTIMGLKPETR	EANMEGIVTIMGLKPETR	3	EANMEGIVTIMGLKPETR3	2.17103e+06	2.09759e+06	2.24175e+06
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	EANMEGIVTIMGLKPETR	EANMEGIVTIMGLKPETR	4	EANMEGIVTIMGLKPETR4	21342.8	47297.5	26449.6
Q63598	Q63598	PLST_RAT	Pls3	Plastin-3	1	EANMPLPGYK	EANMPLPGYK	2	EANMPLPGYK2	24533.1	24075.5	21644.8
P05426	P05426;F1LUE9;A0A8I6AL81	RL7_RAT	Rpl7	Large ribosomal subunit protein uL30	0	EANNFLWPFK	EANNFLWPFK	2	EANNFLWPFK2	30588.2	32858.4	31048.4
A0A0G2JVT8	A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	1	EANNMENIVEHYTFLLQHTLNK	EANNMENIVEHYTFLLQHTLNK	4	EANNMENIVEHYTFLLQHTLNK4	2529.86	4229.23	
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EANQQQQFNR	EANQQQQFNR	2	EANQQQQFNR2	186248	165895	212821
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	EANSIVITPGYGLCAAK	EANSIVITPGYGLC(UniMod:4)AAK	2	EANSIVITPGYGLC(UniMod:4)AAK2	40138.9	39378.2	52579.6
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	EANSIVITPGYGLCAAK	EANSIVITPGYGLC(UniMod:4)AAK	3	EANSIVITPGYGLC(UniMod:4)AAK3	10056.2	9907.73	9756.18
A0A8I6AGL0	A0A8I6AGL0	A0A8I6AGL0_RAT	Ankrd44	Ankyrin repeat domain 44	1	EANVDAVDTVGCTALHR	EANVDAVDTVGC(UniMod:4)TALHR	3	EANVDAVDTVGC(UniMod:4)TALHR3	12091	9074.51	9559.71
P35433	P35433	PUR1_RAT	Ppat	Amidophosphoribosyltransferase	1	EAPAAYSLVIMHR	EAPAAYSLVIMHR	3	EAPAAYSLVIMHR3	3871.82		3703.8
D4A6U4	D4A6U4	D4A6U4_RAT	Tecpr2	Tectonin beta-propeller repeat containing 2	1	EAPAFECDMGNVK	EAPAFEC(UniMod:4)DMGNVK	2	EAPAFEC(UniMod:4)DMGNVK2	2552.17	4736.89	6773.46
Q52KJ8	Q52KJ8	MSRB1_RAT	Msrb1	Methionine-R-sulfoxide reductase B1	1	EAPASQGD	EAPASQGD	1	EAPASQGD1			4117.15
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	EAPCILIYIPDGHTK	EAPC(UniMod:4)ILIYIPDGHTK	2	EAPC(UniMod:4)ILIYIPDGHTK2	12005.6	10204.2	5912.26
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	EAPCILIYIPDGHTK	EAPC(UniMod:4)ILIYIPDGHTK	3	EAPC(UniMod:4)ILIYIPDGHTK3	55389.7	42525.1	58884.1
Q9Z2X5	Q9Z2X5	HOME3_RAT	Homer3	Homer protein homolog 3	1	EAPDTAEREETQQQVQDLETR	EAPDTAEREETQQQVQDLETR	3	EAPDTAEREETQQQVQDLETR3	10291.1	6336.18	8503.02
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	EAPENSPWVSR	EAPENSPWVSR	2	EAPENSPWVSR2	374598	317021	344545
F1M9D6	F1M9D6	F1M9D6_RAT	Stat1	Signal transducer and activator of transcription	1	EAPEPMELDDPK	EAPEPMELDDPK	2	EAPEPMELDDPK2	14675.6	9387.15	9753.92
F1M9D6	F1M9D6	F1M9D6_RAT	Stat1	Signal transducer and activator of transcription	1	EAPEPMELDDPKR	EAPEPMELDDPKR	3	EAPEPMELDDPKR3		7746.48	11878.3
P13832	P13832;P18666	MRLCA_RAT	Rlc-a	Myosin regulatory light chain RLC-A	0	EAPIDKK	EAPIDKK	1	EAPIDKK1			10252
P13832	P13832;P18666	MRLCA_RAT	Rlc-a	Myosin regulatory light chain RLC-A	0	EAPIDKK	EAPIDKK	2	EAPIDKK2			363602
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	EAPNFESFTCLCAPGWQGQR	EAPNFESFTC(UniMod:4)LC(UniMod:4)APGWQGQR	3	EAPNFESFTC(UniMod:4)LC(UniMod:4)APGWQGQR3	26626.4	46261.6	43388.9
D4AC36	D4AC36	D4AC36_RAT	Eif3f	Eukaryotic translation initiation factor 3 subunit F	1	EAPNPIHLTVDTGLQNGR	EAPNPIHLTVDTGLQNGR	3	EAPNPIHLTVDTGLQNGR3	23437.3	15259.3	24921.4
A0A8I6AAY1	A0A8I6AAY1	A0A8I6AAY1_RAT	Cox7a2l	Cytochrome c oxidase subunit 7A2 like	1	EAPPIIFATPTK	EAPPIIFATPTK	2	EAPPIIFATPTK2	139403	131167	150208
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	EAPPPPESPRPPGPPATSGCDPAGTWR	EAPPPPESPRPPGPPATSGC(UniMod:4)DPAGTWR	3	EAPPPPESPRPPGPPATSGC(UniMod:4)DPAGTWR3	27322.7	16638.6	24265.5
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	EAPPSSTESSIR	EAPPSSTESSIR	2	EAPPSSTESSIR2	25901.5	18879.3	21738.5
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	EAPPSSTESSIRPAR	EAPPSSTESSIRPAR	3	EAPPSSTESSIRPAR3	155809	195561	164857
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	EAPQDFHPDR	EAPQDFHPDR	2	EAPQDFHPDR2	1.64891e+06	1.51833e+06	1.67856e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	EAPQDFHPDR	EAPQDFHPDR	3	EAPQDFHPDR3	6.07255e+06	6.44232e+06	7.50442e+06
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	EAPRPDYLLR	EAPRPDYLLR	2	EAPRPDYLLR2	7670.48		3477.94
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	EAPRPDYLLR	EAPRPDYLLR	3	EAPRPDYLLR3	71055.2	48780.6	46682.6
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	EAPVQELR	EAPVQELR	2	EAPVQELR2	137554	151525	143565
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	EAPWECR	EAPWEC(UniMod:4)R	2	EAPWEC(UniMod:4)R2	60365.8	70495.3	81681.3
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	EAPWPSAQSEIR	EAPWPSAQSEIR	2	EAPWPSAQSEIR2	118651	145810	120077
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	EAQADAETER	EAQADAETER	2	EAQADAETER2			4647.46
G3V7L4	G3V7L4	G3V7L4_RAT	Cdh16	Cadherin 16	1	EAQAEYQLQVR	EAQAEYQLQVR	2	EAQAEYQLQVR2	10563.4	11650.9	10520.4
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	EAQAFVK	EAQAFVK	1	EAQAFVK1	6092.63	11041.3	3179.19
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	EAQAFVK	EAQAFVK	2	EAQAFVK2	253509	249665	227123
A0A0G2K1A4	A0A0G2K1A4	A0A0G2K1A4_RAT	Evi5l	Ecotropic viral integration site 5-like	1	EAQALADGR	EAQALADGR	2	EAQALADGR2	16091.5	23255.7	15146.2
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	EAQAQGDPVASAIK	EAQAQGDPVASAIK	2	EAQAQGDPVASAIK2	17256	14666.5	12670.1
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	EAQDAHTALLADYR	EAQDAHTALLADYR	2	EAQDAHTALLADYR2	2329.23		
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	EAQDAHTALLADYR	EAQDAHTALLADYR	3	EAQDAHTALLADYR3	35778.4	44722.7	41402.6
P31977	P31977	EZRI_RAT	Ezr	Ezrin	1	EAQDDLVK	EAQDDLVK	2	EAQDDLVK2	7840.3	3422.9	5912.69
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	EAQDMLNHSEK	EAQDMLNHSEK	3	EAQDMLNHSEK3	4994.94	3130.88	
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	EAQDMLNHSEKEK	EAQDMLNHSEKEK	3	EAQDMLNHSEKEK3	9269.11	7142.44	8434.5
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	EAQDMLNHSEKEK	EAQDMLNHSEKEK	4	EAQDMLNHSEKEK4	4162.28	4327.74	
Q99MZ8	Q99MZ8	LASP1_RAT	Lasp1	LIM and SH3 domain protein 1	1	EAQDSSSYR	EAQDSSSYR	2	EAQDSSSYR2			83839.3
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	EAQEEIAFLK	EAQEEIAFLK	2	EAQEEIAFLK2	17316	17552.4	17903.5
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	EAQELGSPEDR	EAQELGSPEDR	2	EAQELGSPEDR2	96609.1	100644	69055
A0A0G2K098	A0A0G2K098	A0A0G2K098_RAT	Mcc	MCC regulator of WNT signaling pathway	1	EAQEQAYLVHIEHLK	EAQEQAYLVHIEHLK	4	EAQEQAYLVHIEHLK4	9505.92	3331.48	
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	EAQEVKDVDQNLMDR	EAQEVKDVDQNLMDR	3	EAQEVKDVDQNLMDR3	8746.82	8479.96	12242.2
D3ZX06	D3ZX06	D3ZX06_RAT	Ghdc	GH3 domain containing	1	EAQGSCCLPR	EAQGSC(UniMod:4)C(UniMod:4)LPR	2	EAQGSC(UniMod:4)C(UniMod:4)LPR2	8576.19	5658.34	8010.34
Q06145	Q06145	GIP_RAT	Gip	Gastric inhibitory polypeptide	1	EAQGSSLPK	EAQGSSLPK	2	EAQGSSLPK2	4990.93	3058.98	
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	EAQHWSEQAEER	EAQHWSEQAEER	2	EAQHWSEQAEER2	4396.26	4970.72	4521.57
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	EAQHWSEQAEER	EAQHWSEQAEER	3	EAQHWSEQAEER3	45175.5	52689.3	56221.3
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	EAQHWSEQAEERK	EAQHWSEQAEERK	3	EAQHWSEQAEERK3		4967.26	
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	EAQKYPNAELAWCQEEHK	EAQKYPNAELAWC(UniMod:4)QEEHK	3	EAQKYPNAELAWC(UniMod:4)QEEHK3	8662.06	11839.6	10100.6
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	EAQKYPNAELAWCQEEHK	EAQKYPNAELAWC(UniMod:4)QEEHK	4	EAQKYPNAELAWC(UniMod:4)QEEHK4	30317.9	38179.4	35926.8
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	EAQLAALQYEGEK	EAQLAALQYEGEK	2	EAQLAALQYEGEK2	8852.13	4505.68	
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	EAQLAEEK	EAQLAEEK	2	EAQLAEEK2		1652.2	
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	EAQLALGNAAADATEAK	EAQLALGNAAADATEAK	2	EAQLALGNAAADATEAK2	40748.9	52800.2	41953.7
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	EAQLALGNAAADATEAK	EAQLALGNAAADATEAK	3	EAQLALGNAAADATEAK3	23828.5	37298	35237.9
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	EAQLDEEGQFLVR	EAQLDEEGQFLVR	2	EAQLDEEGQFLVR2	58944.1	52792.3	59802.2
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	EAQLPVIENK	EAQLPVIENK	2	EAQLPVIENK2	1.91813e+06	1.52811e+06	1.6285e+06
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	EAQNDLEQVLR	EAQNDLEQVLR	2	EAQNDLEQVLR2	24952.8	25933	21632.2
Q01205	Q01205	ODO2_RAT	Dlst	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial	1	EAQNTCAMLTTFNEVDMSNIQEMR	EAQNTC(UniMod:4)AMLTTFNEVDMSNIQEMR	3	EAQNTC(UniMod:4)AMLTTFNEVDMSNIQEMR3	29942.7	21041.1	25929.7
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	EAQQFGHGHGHGYYAAGQTWQEGDK	EAQQFGHGHGHGYYAAGQTWQEGDK	4	EAQQFGHGHGHGYYAAGQTWQEGDK4	3605.53		
P26817	P26817	ARBK1_RAT	Grk2	Beta-adrenergic receptor kinase 1	1	EAQQLVQR	EAQQLVQR	2	EAQQLVQR2	6819.52	3274.45	
D4AE56	D4AE56	D4AE56_RAT	Ptges2	Prostaglandin E synthase 2	1	EAQQMYGGK	EAQQMYGGK	2	EAQQMYGGK2	4192.78	4209.14	
B2BKY8	B2BKY8	B2BKY8_RAT	Cntrob	Centrobin, centriole duplication and spindle assembly protein	1	EAQQQLALLQSEVR	EAQQQLALLQSEVR	2	EAQQQLALLQSEVR2		1496.67	
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	EAQQSALR	EAQQSALR	2	EAQQSALR2	29679.3	32698.4	26241.5
P62944	P52303;P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	EAQSICER	EAQSIC(UniMod:4)ER	2	EAQSIC(UniMod:4)ER2	150422	134693	136015
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	EAQSILLEPSQLK	EAQSILLEPSQLK	2	EAQSILLEPSQLK2	11875.6	14519.2	11146.2
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	EAQSQLVK	EAQSQLVK	2	EAQSQLVK2	21589.7	16707.8	17347.1
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	EAQSSQATPLQTNKPGSSEATR	EAQSSQATPLQTNKPGSSEATR	3	EAQSSQATPLQTNKPGSSEATR3	10832.7	19114.1	11134.4
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	EAQTLCQELSLLIGEQYLK	EAQTLC(UniMod:4)QELSLLIGEQYLK	3	EAQTLC(UniMod:4)QELSLLIGEQYLK3	11533.7	6395.49	6618.99
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	EAQTLQQYR	EAQTLQQYR	2	EAQTLQQYR2	74250.9	80194	59410.4
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	EAQTSFLHLGYLPNQLFR	EAQTSFLHLGYLPNQLFR	3	EAQTSFLHLGYLPNQLFR3	22487.5	25890.8	
O35760	O35760	IDI1_RAT	Idi1	Isopentenyl-diphosphate Delta-isomerase 1	1	EARGEIK	EARGEIK	2	EARGEIK2			29753.2
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	EASAAMTNSSDRPCQAHR	EASAAMTNSSDRPC(UniMod:4)QAHR	3	EASAAMTNSSDRPC(UniMod:4)QAHR3	18809.8		11302.9
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	EASAAMTNSSDRPCQAHR	EASAAMTNSSDRPC(UniMod:4)QAHR	4	EASAAMTNSSDRPC(UniMod:4)QAHR4	15723.8		32005.2
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	EASADLANTLSFGAIPHLR	EASADLANTLSFGAIPHLR	3	EASADLANTLSFGAIPHLR3	17238.4	14523.4	16596.6
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	EASADLSPYVR	EASADLSPYVR	2	EASADLSPYVR2	99256.5	106996	116911
B1WBY5	B1WBY5	B1WBY5_RAT	Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	1	EASAEELK	EASAEELK	2	EASAEELK2	20129.3	27748.5	26746.9
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	EASAIALDR	EASAIALDR	2	EASAIALDR2	43745.8	34890.6	50649.3
D3Z8E0	D3Z8E0	D3Z8E0_RAT	Rps6ka3	Ribosomal protein S6 kinase	1	EASAVLFTITK	EASAVLFTITK	2	EASAVLFTITK2	1586.06	5390.83	
P11505	Q64542;Q64568;P11505	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	0	EASDIILTDDNFTSIVK	EASDIILTDDNFTSIVK	2	EASDIILTDDNFTSIVK2	17871.1	11562.6	11713.4
Q9ERE6	Q9ERE6	MPRIP_RAT	Mprip	Myosin phosphatase Rho-interacting protein	1	EASDLLEQNR	EASDLLEQNR	2	EASDLLEQNR2	8273.43	7662.69	3590.64
B2GUZ5	B2GUZ5	CAZA1_RAT	Capza1	F-actin-capping protein subunit alpha-1	1	EASDPQPEDVDGGLK	EASDPQPEDVDGGLK	2	EASDPQPEDVDGGLK2	752096	630387	694082
B2GUZ5	B2GUZ5	CAZA1_RAT	Capza1	F-actin-capping protein subunit alpha-1	1	EASDPQPEDVDGGLK	EASDPQPEDVDGGLK	3	EASDPQPEDVDGGLK3	11980.9	10647	1708.93
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	EASELLCYLQEAFQVQPEEHQQMLQR	EASELLC(UniMod:4)YLQEAFQVQPEEHQQMLQR	4	EASELLC(UniMod:4)YLQEAFQVQPEEHQQMLQR4	20684.4	17651.6	17757.8
P11497	E9PSQ0;P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	0	EASFEYLQNEGER	EASFEYLQNEGER	2	EASFEYLQNEGER2	3503.09	2143.44	2719.82
B1WC06	B1WC06	B1WC06_RAT	Mon1a	Vacuolar fusion protein MON1 homolog	1	EASGDSPK	EASGDSPK	1	EASGDSPK1			4243.84
A0A8I6A8Q1	A0A8I6A8Q1	A0A8I6A8Q1_RAT	A2ml1	Alpha-2-macroglobulin-like 1	1	EASGFSLSVK	EASGFSLSVK	2	EASGFSLSVK2	8889.06	13972.5	8678.11
Q9ESS6	Q9ESS6	BCAM_RAT	Bcam	Basal cell adhesion molecule	1	EASGLYSLTSTLYLR	EASGLYSLTSTLYLR	2	EASGLYSLTSTLYLR2	1277.21	5354.84	1881.33
D4A589	D4A589	D4A589_RAT	Smg6	Telomerase-binding protein EST1A	1	EASGNEEFK	EASGNEEFK	2	EASGNEEFK2	1736.97		
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	EASHVLEVK	EASHVLEVK	2	EASHVLEVK2	4514.55	686.703	2201.54
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	EASIDILHSIVK	EASIDILHSIVK	2	EASIDILHSIVK2	12815.7	10165.3	7621.65
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	EASIDILHSIVK	EASIDILHSIVK	3	EASIDILHSIVK3	44700.9	36662.1	42771.7
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	EASIVVSVLHSPHSGPSYTPATSSTPPIR	EASIVVSVLHSPHSGPSYTPATSSTPPIR	4	EASIVVSVLHSPHSGPSYTPATSSTPPIR4	10285.1	6195.07	12416.7
Q5CD77	M0R7T9;Q5CD77	TBC14_RAT	Tbc1d14	TBC1 domain family member 14	0	EASLELIK	EASLELIK	2	EASLELIK2	5276.59		
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EASLGEASK	EASLGEASK	1	EASLGEASK1	3318.19	4856.23	2298.46
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EASLGEASK	EASLGEASK	2	EASLGEASK2		911875	
Q811U3	Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	1	EASLLDLK	EASLLDLK	2	EASLLDLK2	14484.5	11600.3	
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	EASLPLPGYK	EASLPLPGYK	2	EASLPLPGYK2	177258	160104	128980
A0A8I5ZV26	A0A8I5ZV26	A0A8I5ZV26_RAT	Stom	Stomatin	1	EASMVITESPAALQLR	EASMVITESPAALQLR	2	EASMVITESPAALQLR2	1.30105e+06	1.28743e+06	1.28535e+06
A0A8I5ZV26	A0A8I5ZV26	A0A8I5ZV26_RAT	Stom	Stomatin	1	EASMVITESPAALQLR	EASMVITESPAALQLR	3	EASMVITESPAALQLR3	676734	787097	866695
Q5XIE8	Q5XIE8	ITM2B_RAT	Itm2b	Integral membrane protein 2B	1	EASNCFTIR	EASNC(UniMod:4)FTIR	2	EASNC(UniMod:4)FTIR2	5056.73	7942.59	9254.02
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	EASNMGWLTFTFSLQK	EASNMGWLTFTFSLQK	2	EASNMGWLTFTFSLQK2	8318.63	4913.76	
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	EASPNPEDGIIR	EASPNPEDGIIR	2	EASPNPEDGIIR2	107927	105070	111070
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	EASPQGSK	EASPQGSK	1	EASPQGSK1	3089.92	2488.64	8913.72
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	EASPQGSK	EASPQGSK	2	EASPQGSK2	3993.06	5672.48	36886.5
D4A6U4	D4A6U4	D4A6U4_RAT	Tecpr2	Tectonin beta-propeller repeat containing 2	1	EASQCDHTQDTDLLK	EASQC(UniMod:4)DHTQDTDLLK	3	EASQC(UniMod:4)DHTQDTDLLK3	6174.47	8676.42	7870.89
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	EASQIDNPQPQER	EASQIDNPQPQER	2	EASQIDNPQPQER2	165792	157939	149954
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	EASQIDNPQPQER	EASQIDNPQPQER	3	EASQIDNPQPQER3	16861.3	27421.8	22893.6
Q5HZY0	Q5HZY0	UBXN4_RAT	Ubxn4	UBX domain-containing protein 4	1	EASSDNFVAIK	EASSDNFVAIK	2	EASSDNFVAIK2	25747.2	17777.4	21305.8
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	EASSPSIYSR	EASSPSIYSR	2	EASSPSIYSR2	819118	836785	829344
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	EASSTQDTGKLPVK	EASSTQDTGKLPVK	2	EASSTQDTGKLPVK2	5711.94	9377.08	6890.97
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	EASSTQDTGKLPVK	EASSTQDTGKLPVK	3	EASSTQDTGKLPVK3	72120	75157.6	85715.5
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	EASSTSNKETTVETK	EASSTSNKETTVETK	3	EASSTSNKETTVETK3			8570.96
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	EASSVLQWLESK	EASSVLQWLESK	2	EASSVLQWLESK2	70147.7	47876.4	39829.3
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	EASTGVLK	EASTGVLK	2	EASTGVLK2	35700.4	32585.2	33983.4
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	EASTLIDRPAPQFER	EASTLIDRPAPQFER	3	EASTLIDRPAPQFER3	31868.2	56025.8	51895.7
Q9R064	Q9R064	GORS2_RAT	Gorasp2	Golgi reassembly-stacking protein 2	1	EASVTPSNLWGGQGLLGVSIR	EASVTPSNLWGGQGLLGVSIR	3	EASVTPSNLWGGQGLLGVSIR3	5186.03	3373.18	1747.68
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	EASWQIQETAPPSTWPHSGR	EASWQIQETAPPSTWPHSGR	3	EASWQIQETAPPSTWPHSGR3	42668.1	45751.8	40593.2
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	EASYIAEELDK	EASYIAEELDK	2	EASYIAEELDK2	23214.6	17622.5	15203.6
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	EATAADIDR	EATAADIDR	2	EATAADIDR2	50990.6	47536.5	41957.8
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	EATAADIDRK	EATAADIDRK	2	EATAADIDRK2	39153.9	48794.2	42334.2
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	EATADDLIK	EATADDLIK	2	EATADDLIK2		9712.02	9792.8
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	EATDAAMLNR	EATDAAMLNR	2	EATDAAMLNR2	41955.4	41585.6	36535.1
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	EATDAELNQLR	EATDAELNQLR	2	EATDAELNQLR2		7257.86	10699.4
Q9JIL3	Q9JIL3	ILF3_RAT	Ilf3	Interleukin enhancer-binding factor 3	1	EATDAIGHLDR	EATDAIGHLDR	3	EATDAIGHLDR3	11352.8	10180.6	7248.83
Q3T1K5	Q3T1K5	CAZA2_RAT	Capza2	F-actin-capping protein subunit alpha-2	1	EATDPRPYEAENAIESWR	EATDPRPYEAENAIESWR	3	EATDPRPYEAENAIESWR3	240054	213512	214905
Q3MIE4	Q3MIE4	VAT1_RAT	Vat1	Synaptic vesicle membrane protein VAT-1 homolog	1	EATEAATVAAAAEAR	EATEAATVAAAAEAR	2	EATEAATVAAAAEAR2	28362.4	25343	24505.8
Q3MIE4	Q3MIE4	VAT1_RAT	Vat1	Synaptic vesicle membrane protein VAT-1 homolog	1	EATEAATVAAAAEAR	EATEAATVAAAAEAR	3	EATEAATVAAAAEAR3	17477	14714	17830.5
O08838	O08838	AMPH_RAT	Amph	Amphiphysin	1	EATEDVAPQGPAGEK	EATEDVAPQGPAGEK	2	EATEDVAPQGPAGEK2	6808.53	7196.57	8400.4
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	EATEKEFEPLLNWMK	EATEKEFEPLLNWMK	2	EATEKEFEPLLNWMK2	70881.5	99580.2	93823.4
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	EATEKEFEPLLNWMK	EATEKEFEPLLNWMK	3	EATEKEFEPLLNWMK3	644738	711286	674857
P12928	P12928	KPYR_RAT	Pklr	Pyruvate kinase PKLR	1	EATESFATSPLSYRPVAIALDTK	EATESFATSPLSYRPVAIALDTK	3	EATESFATSPLSYRPVAIALDTK3	13112.9	7519.52	6767.93
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	EATEYEIELYGISR	EATEYEIELYGISR	2	EATEYEIELYGISR2	194667	220744	178573
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	EATEYEIELYGISR	EATEYEIELYGISR	3	EATEYEIELYGISR3	24937	25531.1	19414.1
P18395	P18395	CSDE1_RAT	Csde1	Cold shock domain-containing protein E1	1	EATFSNPK	EATFSNPK	2	EATFSNPK2	14422.4	10914.1	21374.1
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	EATIPGHLNSYTIK	EATIPGHLNSYTIK	2	EATIPGHLNSYTIK2	5.17168e+06	5.70733e+06	5.28441e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	EATIPGHLNSYTIK	EATIPGHLNSYTIK	3	EATIPGHLNSYTIK3	369268	425552	355523
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	EATLEPFGVNSLEVK	EATLEPFGVNSLEVK	2	EATLEPFGVNSLEVK2	5928.87	14521.8	10559
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	EATLNNSLMR	EATLNNSLMR	2	EATLNNSLMR2	21419.9	24102.8	26352.8
E9PTA5	E9PTA5	E9PTA5_RAT	Pign	GPI ethanolamine phosphate transferase 1	1	EATLPFLFTPFK	EATLPFLFTPFK	2	EATLPFLFTPFK2	10488.7	10974.2	
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	EATLPPVSPPK	EATLPPVSPPK	2	EATLPPVSPPK2	32160.4	36623.5	43851.4
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	EATLSFGEK	EATLSFGEK	2	EATLSFGEK2	91147.6	48154.7	49963.3
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	EATLSWLANCK	EATLSWLANC(UniMod:4)K	2	EATLSWLANC(UniMod:4)K2	6710.49	8275.79	10876.6
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	EATNDDPWGPSGQLMGEIAK	EATNDDPWGPSGQLMGEIAK	3	EATNDDPWGPSGQLMGEIAK3	23625.8	27957.2	29832.4
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	EATNPPIIQEEK	EATNPPIIQEEK	2	EATNPPIIQEEK2	5701.4	4612.36	4471.52
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	EATNPPIIQEEKPK	EATNPPIIQEEKPK	2	EATNPPIIQEEKPK2	82050.4	88582.5	85440.4
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	EATNPPIIQEEKPK	EATNPPIIQEEKPK	3	EATNPPIIQEEKPK3	1.21833e+06	1.12364e+06	1.21715e+06
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	EATNPPIIQEEKPKK	EATNPPIIQEEKPKK	3	EATNPPIIQEEKPKK3	52163.1	40867.4	64325.1
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	EATNPPIIQEEKPKK	EATNPPIIQEEKPKK	4	EATNPPIIQEEKPKK4	56600.7	50037.2	76343.3
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	EATPGDISPYTIPEEDRHCIR	EATPGDISPYTIPEEDRHC(UniMod:4)IR	4	EATPGDISPYTIPEEDRHC(UniMod:4)IR4	18560.1	19326.8	22107.6
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	EATPYVK	EATPYVK	2	EATPYVK2	80626.2	88489.9	96371.7
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	EATQCIEELSAQGPLHVFVK	EATQC(UniMod:4)IEELSAQGPLHVFVK	3	EATQC(UniMod:4)IEELSAQGPLHVFVK3	6470.83	6455.89	
Q05695	Q05695	L1CAM_RAT	L1cam	Neural cell adhesion molecule L1	1	EATQITQGPR	EATQITQGPR	2	EATQITQGPR2	37054.9	34901.2	46400.7
Q920A6	Q920A6	RISC_RAT	Scpep1	Retinoid-inducible serine carboxypeptidase	1	EATQLWGK	EATQLWGK	2	EATQLWGK2	36262.4	33437.7	33623.3
F1M9Q3	F1M9Q3	F1M9Q3_RAT	Ltn1	E3 ubiquitin-protein ligase listerin	1	EATQQAFEK	EATQQAFEK	2	EATQQAFEK2	5105.62	3326.1	4371.32
Q9Z2X5	Q9Z2X5	HOME3_RAT	Homer3	Homer protein homolog 3	1	EATSQSVEQLEAR	EATSQSVEQLEAR	2	EATSQSVEQLEAR2	1751.84	4501.2	7993.56
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	EATSTEDIQGEKDK	EATSTEDIQGEKDK	3	EATSTEDIQGEKDK3		6886.84	
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	EATSTFTNITYR	EATSTFTNITYR	2	EATSTFTNITYR2	3.25947e+06	99900.1	92364.9
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	EATSTFTNITYR	EATSTFTNITYR	3	EATSTFTNITYR3	40259.9	35879	41875.8
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	EATSTFTNITYRGT	EATSTFTNITYRGT	2	EATSTFTNITYRGT2	4424.89	1807.21	
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	EATSVHDLNDK	EATSVHDLNDK	2	EATSVHDLNDK2	10253.2	7472.74	3881.55
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	EATSVHDLNDK	EATSVHDLNDK	3	EATSVHDLNDK3	43733.6	64196.4	53148.9
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	EATTDFTVDAR	EATTDFTVDAR	2	EATTDFTVDAR2	1.90957e+06		
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	EATTEFSVDAR	EATTEFSVDAR	2	EATTEFSVDAR2	3.13591e+06	3.30516e+06	3.61359e+06
Q32Q07	Q32Q07	LRRN1_RAT	Lrrn1	Leucine-rich repeat neuronal protein 1	1	EATTVDCNDLR	EATTVDC(UniMod:4)NDLR	2	EATTVDC(UniMod:4)NDLR2	19831.6	17718.9	5082.65
Q63372	Q63372	NRX1A_RAT	Nrxn1	Neurexin-1	1	EATVLSYDGSMFMK	EATVLSYDGSMFMK	2	EATVLSYDGSMFMK2	6075.18		11102.7
P11915	P11915	SCP2_RAT	Scp2	Sterol carrier protein 2	1	EATWVVDVK	EATWVVDVK	2	EATWVVDVK2	67657.2	51993.6	71240.3
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	EATYECLCPGGFSGLHCEK	EATYEC(UniMod:4)LC(UniMod:4)PGGFSGLHC(UniMod:4)EK	3	EATYEC(UniMod:4)LC(UniMod:4)PGGFSGLHC(UniMod:4)EK3	16552.2	23967.3	28477.7
D3ZM09	D3ZM09	D3ZM09_RAT	Sars2	serine--tRNA ligase	1	EAVAEAVR	EAVAEAVR	2	EAVAEAVR2		5073.98	5117.29
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	EAVAMESFAK	EAVAMESFAK	2	EAVAMESFAK2	399911	343530	415558
A0A8I6GK59	A0A8I6GK59	A0A8I6GK59_RAT	Bmp2k	BMP-2 inducible kinase	1	EAVANFTNQK	EAVANFTNQK	2	EAVANFTNQK2	8898.85	3375.08	10037
Q63054	Q63054	ICA69_RAT	Ica1	Islet cell autoantigen 1	1	EAVAQEPR	EAVAQEPR	2	EAVAQEPR2	7732.43	9299.99	10647.3
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	EAVCIVLSDDTCSDEK	EAVC(UniMod:4)IVLSDDTC(UniMod:4)SDEK	2	EAVC(UniMod:4)IVLSDDTC(UniMod:4)SDEK2	171589	151606	141243
O35314	O35314	SCG1_RAT	Chgb	Secretogranin-1	1	EAVDDQESLHPSNQQVSK	EAVDDQESLHPSNQQVSK	3	EAVDDQESLHPSNQQVSK3	17431	6270.12	3948.33
B2RYN0	B2RYN0	B2RYN0_RAT	Pgm3	Phosphoacetylglucosamine mutase	1	EAVDPQQTAFIVVGR	EAVDPQQTAFIVVGR	2	EAVDPQQTAFIVVGR2	7130.11	9963.33	10498.2
B2RYN0	B2RYN0	B2RYN0_RAT	Pgm3	Phosphoacetylglucosamine mutase	1	EAVDPQQTAFIVVGR	EAVDPQQTAFIVVGR	3	EAVDPQQTAFIVVGR3	54715.9	30506.1	57887
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	EAVDSALR	EAVDSALR	2	EAVDSALR2	90950.5	129888	136306
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	EAVEAQIR	EAVEAQIR	2	EAVEAQIR2	40713.4	36489.6	38912.4
Q2M2R8	Q2M2R8	PEX5_RAT	Pex5	Peroxisomal targeting signal 1 receptor	1	EAVEHFLEALNMQR	EAVEHFLEALNMQR	3	EAVEHFLEALNMQR3	8463.82	3437.18	
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	EAVELPLTHFELYK	EAVELPLTHFELYK	2	EAVELPLTHFELYK2	38505.5	42634.1	42312.7
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	EAVELPLTHFELYK	EAVELPLTHFELYK	3	EAVELPLTHFELYK3	186598	194562	203942
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	EAVEMAYK	EAVEMAYK	2	EAVEMAYK2	45090.4	52095	32503
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	EAVEQLQK	EAVEQLQK	1	EAVEQLQK1	251775	209293	238172
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	EAVEQLQK	EAVEQLQK	2	EAVEQLQK2	1.42713e+07	1.22946e+07	1.41174e+07
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	EAVETCINSVK	EAVETC(UniMod:4)INSVK	2	EAVETC(UniMod:4)INSVK2	585.625	3168.13	
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	EAVFAQYDFFR	EAVFAQYDFFR	2	EAVFAQYDFFR2	190112	239765	197231
A0A8I6G5Q1	A0A8I6G5Q1	A0A8I6G5Q1_RAT	Sema4d	Semaphorin 4D	1	EAVFAVNALDISEK	EAVFAVNALDISEK	2	EAVFAVNALDISEK2	45688.8	46469.3	47094.8
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	EAVFDDDMEQLR	EAVFDDDMEQLR	2	EAVFDDDMEQLR2	8914.1	9780.83	2549.91
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	EAVFVKPK	EAVFVKPK	2	EAVFVKPK2	95540.1	105045	93019.9
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	EAVGDLLDAFK	EAVGDLLDAFK	2	EAVGDLLDAFK2	14727.8	8733.45	8059.31
P36372	P36372	TAP2_RAT	Tap2	Antigen peptide transporter 2	1	EAVGGLQTVR	EAVGGLQTVR	2	EAVGGLQTVR2	127574	135805	138778
B0BN63	B0BN63	B0BN63_RAT	Ahsa1	Activator of Hsp90 ATPase activity 1	1	EAVGIYISTLK	EAVGIYISTLK	2	EAVGIYISTLK2	23397.4	19160.2	24479
Q793F9	A0A8I6GH80;Q793F9	VPS4A_RAT	Vps4a	Vacuolar protein sorting-associated protein 4A	0	EAVILPIK	EAVILPIK	2	EAVILPIK2	41665.1	31450.6	27001.7
Q793F9	A0A8I6GH80;Q793F9	VPS4A_RAT	Vps4a	Vacuolar protein sorting-associated protein 4A	0	EAVILPIKFPHLFTGK	EAVILPIKFPHLFTGK	4	EAVILPIKFPHLFTGK4	4006.47	6547.62	2403.78
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	EAVKEESIK	EAVKEESIK	2	EAVKEESIK2	8354.85	1095.66	2158.43
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	EAVKEESIKR	EAVKEESIKR	3	EAVKEESIKR3			21660.6
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	EAVLAALALR	EAVLAALALR	2	EAVLAALALR2	11790.3	13124	9323.93
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	EAVLAAYWR	EAVLAAYWR	2	EAVLAAYWR2	20610.1	27516.4	23440.1
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	EAVLEEDDDLWVR	EAVLEEDDDLWVR	2	EAVLEEDDDLWVR2	21225.9	19068.2	17221.4
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	EAVLGSDHSK	EAVLGSDHSK	2	EAVLGSDHSK2	17281.9	14157.5	22403.1
Q6PDU7	Q6PDU7	ATP5L_RAT	Atp5mg	ATP synthase subunit g, mitochondrial	1	EAVLNGLVATEVWMWFYIGEIIGK	EAVLNGLVATEVWMWFYIGEIIGK	3	EAVLNGLVATEVWMWFYIGEIIGK3	7279.64		
P06760	P06760	BGLR_RAT	Gusb	Beta-glucuronidase	1	EAVLPQR	EAVLPQR	2	EAVLPQR2	23281.3	22747.9	19927.1
A0A8I6A0D0	A0A8I6A0D0	A0A8I6A0D0_RAT	Abcg3	ATP-binding cassette, subfamily G (WHITE), member 3	1	EAVLSFHNISYR	EAVLSFHNISYR	3	EAVLSFHNISYR3	63063.3	50733.9	68997.9
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	EAVMNINK	EAVMNINK	1	EAVMNINK1	137546	160249	133355
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	EAVMNINK	EAVMNINK	2	EAVMNINK2	8.49045e+06	1.06877e+07	9.95968e+06
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	EAVPEPPLLSR	EAVPEPPLLSR	2	EAVPEPPLLSR2	891261	895720	943112
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	EAVPPQAGEMPEK	EAVPPQAGEMPEK	2	EAVPPQAGEMPEK2	135325	83376.8	141713
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	EAVQELK	EAVQELK	1	EAVQELK1	4658.44	4464.18	4680.42
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	EAVQELK	EAVQELK	2	EAVQELK2	200707	185939	199448
P50878	A0A8I6AL38;A0A8I6ASF5;P50878	RL4_RAT	Rpl4	Large ribosomal subunit protein uL4	0	EAVQLLK	EAVQLLK	2	EAVQLLK2	42053.1	35263.7	14307.2
B5DF45	B5DF45	TRAF6_RAT	Traf6	TNF receptor-associated factor 6	1	EAVQTPCGHR	EAVQTPC(UniMod:4)GHR	2	EAVQTPC(UniMod:4)GHR2	5663.25		
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	EAVRNSLAE	EAVRNSLAE	2	EAVRNSLAE2	1.54125e+06	1.60847e+06	1.59686e+06
F1M7Q7	F1M7Q7	F1M7Q7_RAT	Otud4	ubiquitinyl hydrolase 1	1	EAVSAEPEPK	EAVSAEPEPK	2	EAVSAEPEPK2	5176.93	2750.48	
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	EAVSALLEQHGLQGDVAFGHSK	EAVSALLEQHGLQGDVAFGHSK	3	EAVSALLEQHGLQGDVAFGHSK3	16717	19931.3	22322.5
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	EAVSALLEQHGLQGDVAFGHSK	EAVSALLEQHGLQGDVAFGHSK	4	EAVSALLEQHGLQGDVAFGHSK4	21092.4	17420	21532.7
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	EAVSICK	EAVSIC(UniMod:4)K	1	EAVSIC(UniMod:4)K1	1171.72	2254.16	1775.94
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	EAVSICK	EAVSIC(UniMod:4)K	2	EAVSIC(UniMod:4)K2	409392	412979	393692
E9PT79	E9PT79	E9PT79_RAT	Tsn	Translin	1	EAVTEILGIEPDREK	EAVTEILGIEPDREK	2	EAVTEILGIEPDREK2	2221.61	4443.57	2530.93
E9PT79	E9PT79	E9PT79_RAT	Tsn	Translin	1	EAVTEILGIEPDREK	EAVTEILGIEPDREK	3	EAVTEILGIEPDREK3	68165.7	51647.1	93695.7
Q01205	Q01205	ODO2_RAT	Dlst	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial	1	EAVTFLR	EAVTFLR	2	EAVTFLR2	253462	239651	259327
A0A8I5ZTW6	A0A8I5ZTW6	A0A8I5ZTW6_RAT	Gopc	Golgi associated PDZ and coiled-coil motif containing	1	EAVTILSQQR	EAVTILSQQR	2	EAVTILSQQR2	25949.3	23467.3	17883
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	EAVTTLIASGVSIK	EAVTTLIASGVSIK	2	EAVTTLIASGVSIK2	29545.1	24863.7	23257
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	EAVTTLIASGVSIK	EAVTTLIASGVSIK	3	EAVTTLIASGVSIK3	2031.53	4451.45	5294.8
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	EAVVDYLLQYGYLQKPLEGADDFR	EAVVDYLLQYGYLQKPLEGADDFR	3	EAVVDYLLQYGYLQKPLEGADDFR3		9060.46	7370.74
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	EAVVVDYGVR	EAVVVDYGVR	2	EAVVVDYGVR2	13587.4	16500.7	16191.6
Q562C7	M0R548;Q562C7	PUM3_RAT	Pum3	Pumilio homolog 3	0	EAVVYLAHTHDGAR	EAVVYLAHTHDGAR	3	EAVVYLAHTHDGAR3	3810.88		
G3V6W5	G3V6W5	G3V6W5_RAT	Ifih1	RNA helicase	1	EAVYNNIMR	EAVYNNIMR	2	EAVYNNIMR2	16878.4	11870.4	
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	EAVYSGVQSPR	EAVYSGVQSPR	2	EAVYSGVQSPR2	35385	38008	38591.7
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	EAVYSVMALVEHSGHYTCK	EAVYSVMALVEHSGHYTC(UniMod:4)K	3	EAVYSVMALVEHSGHYTC(UniMod:4)K3	16379.7	4436.16	4293.48
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	EAVYSVMALVEHSGHYTCK	EAVYSVMALVEHSGHYTC(UniMod:4)K	4	EAVYSVMALVEHSGHYTC(UniMod:4)K4	29804	29541.3	32064.5
P23377	P23377	FURIN_RAT	Furin	Furin	1	EAWAQGFTGR	EAWAQGFTGR	2	EAWAQGFTGR2	10821.9	10695.4	16582
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	EAWDAGK	EAWDAGK	1	EAWDAGK1	3179.94	2742.07	5803.74
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	EAWDAGK	EAWDAGK	2	EAWDAGK2	214917	230697	262834
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	EAWHGKPLPK	EAWHGKPLPK	2	EAWHGKPLPK2	1047.89	1394.7	
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	EAWHGKPLPK	EAWHGKPLPK	3	EAWHGKPLPK3	22563.1	15475.6	15370.3
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	EAWLSPVHSYPLLATR	EAWLSPVHSYPLLATR	3	EAWLSPVHSYPLLATR3	139981	115416	113606
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	EAWTVSGR	EAWTVSGR	2	EAWTVSGR2	15146.7	16909.8	16289.5
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	EAYAEYHFR	EAYAEYHFR	2	EAYAEYHFR2	974461	1.07751e+06	1.11102e+06
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	EAYAEYHFR	EAYAEYHFR	3	EAYAEYHFR3	3.16082e+06	3.42221e+06	3.664e+06
A0A8I5YBR2	A0A8I5YBR2	A0A8I5YBR2_RAT	Cops6	COP9 signalosome complex subunit 6	1	EAYALCHCLPVLSTDK	EAYALC(UniMod:4)HC(UniMod:4)LPVLSTDK	3	EAYALC(UniMod:4)HC(UniMod:4)LPVLSTDK3	20579.6	11112.6	17373.1
A0A8I5YBR2	A0A8I5YBR2	A0A8I5YBR2_RAT	Cops6	COP9 signalosome complex subunit 6	1	EAYALCHCLPVLSTDKFK	EAYALC(UniMod:4)HC(UniMod:4)LPVLSTDKFK	3	EAYALC(UniMod:4)HC(UniMod:4)LPVLSTDKFK3	2437.57	3728.81	4185.35
A0A8I5YBR2	A0A8I5YBR2	A0A8I5YBR2_RAT	Cops6	COP9 signalosome complex subunit 6	1	EAYALCHCLPVLSTDKFK	EAYALC(UniMod:4)HC(UniMod:4)LPVLSTDKFK	4	EAYALC(UniMod:4)HC(UniMod:4)LPVLSTDKFK4	20345.3	17528.3	14077.7
Q09325	Q09325	MGAT1_RAT	Mgat1	Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	1	EAYDRDFLAQVYGAPQLQVEK	EAYDRDFLAQVYGAPQLQVEK	3	EAYDRDFLAQVYGAPQLQVEK3	6431.2	6178.29	9343.27
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	EAYDSTLPLIK	EAYDSTLPLIK	2	EAYDSTLPLIK2	30261.6	24044.1	21683.2
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	EAYEAGLIGK	EAYEAGLIGK	2	EAYEAGLIGK2	55653.7	58814	59658.9
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	EAYEEDDDGPR	EAYEEDDDGPR	2	EAYEEDDDGPR2	47056.3	37533.2	47380.2
B2RYD7	B2RYD7	B2RYD7_RAT	Stt3b	dolichyl-diphosphooligosaccharide--protein glycotransferase	1	EAYFWLR	EAYFWLR	2	EAYFWLR2	89200.5	77757.2	93627.1
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	EAYPEEAYIADLDAK	EAYPEEAYIADLDAK	2	EAYPEEAYIADLDAK2	31165.9	10279.2	14077
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	EAYPGDVFYLHSR	EAYPGDVFYLHSR	2	EAYPGDVFYLHSR2	537876	491204	521397
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	EAYPGDVFYLHSR	EAYPGDVFYLHSR	3	EAYPGDVFYLHSR3	1.56307e+06	1.55251e+06	1.78707e+06
D3ZF19	D3ZF19	D3ZF19_RAT	Tmem68	Transmembrane protein 68	1	EAYSHNLWDGAR	EAYSHNLWDGAR	3	EAYSHNLWDGAR3	9857.98	13084.6	8509.83
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	EAYTAVVYHNR	EAYTAVVYHNR	2	EAYTAVVYHNR2	11010.7	7824.38	6792.51
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	EAYTAVVYHNR	EAYTAVVYHNR	3	EAYTAVVYHNR3	54248.3	56084	54663.8
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	EAYVPSK	EAYVPSK	1	EAYVPSK1	69975	59965.5	66633.8
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	EAYVPSK	EAYVPSK	2	EAYVPSK2	2.80137e+06	2.82056e+06	3.15002e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ECANGYLELLDHVLLTLQK	EC(UniMod:4)ANGYLELLDHVLLTLQK	3	EC(UniMod:4)ANGYLELLDHVLLTLQK3	7958.46		
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ECANGYLELLDHVLLTLQKPNPELK	EC(UniMod:4)ANGYLELLDHVLLTLQKPNPELK	3	EC(UniMod:4)ANGYLELLDHVLLTLQKPNPELK3	14847.4	14832.9	12054.4
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ECANGYLELLDHVLLTLQKPNPELK	EC(UniMod:4)ANGYLELLDHVLLTLQKPNPELK	4	EC(UniMod:4)ANGYLELLDHVLLTLQKPNPELK4	168910	147565	152664
Q62632	Q62632	FSTL1_RAT	Fstl1	Follistatin-related protein 1	1	ECAVTEK	EC(UniMod:4)AVTEK	2	EC(UniMod:4)AVTEK2			91131.9
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	ECCDTQDSVSCFSTQSPLMK	EC(UniMod:4)C(UniMod:4)DTQDSVSC(UniMod:4)FSTQSPLMK	3	EC(UniMod:4)C(UniMod:4)DTQDSVSC(UniMod:4)FSTQSPLMK3	244979	179433	192517
P02770	P02770	ALBU_RAT	Alb	Albumin	1	ECCHGDLLECADDR	EC(UniMod:4)C(UniMod:4)HGDLLEC(UniMod:4)ADDR	2	EC(UniMod:4)C(UniMod:4)HGDLLEC(UniMod:4)ADDR2	162248	157403	167789
P02770	P02770	ALBU_RAT	Alb	Albumin	1	ECCHGDLLECADDR	EC(UniMod:4)C(UniMod:4)HGDLLEC(UniMod:4)ADDR	3	EC(UniMod:4)C(UniMod:4)HGDLLEC(UniMod:4)ADDR3	2.67178e+06	11921.1	8576.93
P02770	P02770	ALBU_RAT	Alb	Albumin	1	ECCHGDLLECADDRAELAK	EC(UniMod:4)C(UniMod:4)HGDLLEC(UniMod:4)ADDRAELAK	3	EC(UniMod:4)C(UniMod:4)HGDLLEC(UniMod:4)ADDRAELAK3	2.13667e+06	2.06431e+06	1.90465e+06
P02770	P02770	ALBU_RAT	Alb	Albumin	1	ECCHGDLLECADDRAELAK	EC(UniMod:4)C(UniMod:4)HGDLLEC(UniMod:4)ADDRAELAK	4	EC(UniMod:4)C(UniMod:4)HGDLLEC(UniMod:4)ADDRAELAK4	29727.9	38240.1	1.85279e+07
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	ECDADGWTNDIPICEVVK	EC(UniMod:4)DADGWTNDIPIC(UniMod:4)EVVK	3	EC(UniMod:4)DADGWTNDIPIC(UniMod:4)EVVK3	28872.7	27061.5	18970.5
Q5XI83	Q5XI83	VP35L_RAT	Vps35l	VPS35 endosomal protein-sorting factor-like	1	ECDESGFPK	EC(UniMod:4)DESGFPK	2	EC(UniMod:4)DESGFPK2	7325.16	7320.36	4926.91
Q6Y1S1	Q6Y1S1	MYD88_RAT	Myd88	Myeloid differentiation primary response protein MyD88	1	ECDFQTK	EC(UniMod:4)DFQTK	2	EC(UniMod:4)DFQTK2		4512.69	7808.26
A0A8I5ZVY2	A0A8I5ZVY2	A0A8I5ZVY2_RAT	Mrps6	Mitochondrial ribosomal protein S6	1	ECDGIVPVPLEEK	EC(UniMod:4)DGIVPVPLEEK	2	EC(UniMod:4)DGIVPVPLEEK2	5489.68	10910.3	13204.9
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	ECDNALR	EC(UniMod:4)DNALR	1	EC(UniMod:4)DNALR1	13372.4	10860.2	
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	ECDNALR	EC(UniMod:4)DNALR	2	EC(UniMod:4)DNALR2	2.0755e+06	2.63879e+06	4163.93
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	ECDRPCVNGGR	EC(UniMod:4)DRPC(UniMod:4)VNGGR	3	EC(UniMod:4)DRPC(UniMod:4)VNGGR3	10076.2		
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	ECEDTHLGEEVDRNWNEVVTQQYLFDR	EC(UniMod:4)EDTHLGEEVDRNWNEVVTQQYLFDR	4	EC(UniMod:4)EDTHLGEEVDRNWNEVVTQQYLFDR4	2202.86		
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	ECEDVMDWINDK	EC(UniMod:4)EDVMDWINDK	2	EC(UniMod:4)EDVMDWINDK2	50817.5	43937.8	52327.9
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	ECEEDSPVSR	EC(UniMod:4)EEDSPVSR	2	EC(UniMod:4)EEDSPVSR2	5705.14	4703.09	3269.3
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	ECEEIIR	EC(UniMod:4)EEIIR	1	EC(UniMod:4)EEIIR1	83886.2	70241	97708.5
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	ECEEIIR	EC(UniMod:4)EEIIR	2	EC(UniMod:4)EEIIR2	78864.5	2.75752e+07	3.21993e+07
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	ECEEIIRK	EC(UniMod:4)EEIIRK	2	EC(UniMod:4)EEIIRK2	1.15285e+06	1.47653e+06	1.36348e+06
A0A8I5Y224	A0A8I5Y224	A0A8I5Y224_RAT	Adam9	ADAM metallopeptidase domain 9	1	ECELDPCCEGSTCK	EC(UniMod:4)ELDPC(UniMod:4)C(UniMod:4)EGSTC(UniMod:4)K	2	EC(UniMod:4)ELDPC(UniMod:4)C(UniMod:4)EGSTC(UniMod:4)K2	6080.78		10382.4
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	ECELINSVPACVPWSPYLFQPNDR	EC(UniMod:4)ELINSVPAC(UniMod:4)VPWSPYLFQPNDR	3	EC(UniMod:4)ELINSVPAC(UniMod:4)VPWSPYLFQPNDR3	8993.2	7161.04	15223.1
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	ECELLMLGR	EC(UniMod:4)ELLMLGR	2	EC(UniMod:4)ELLMLGR2	17757.7	7670.96	8317.91
P09456	P09456	KAP0_RAT	Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit	1	ECELYVQK	EC(UniMod:4)ELYVQK	2	EC(UniMod:4)ELYVQK2	75435.5	77122.8	79497.5
Q6AY41	Q6AY41	CC50A_RAT	Tmem30a	Cell cycle control protein 50A	1	ECEPYRR	EC(UniMod:4)EPYRR	2	EC(UniMod:4)EPYRR2			10232.1
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	ECEQILHDVELLSSLALAR	EC(UniMod:4)EQILHDVELLSSLALAR	3	EC(UniMod:4)EQILHDVELLSSLALAR3	9109.83	974.789	3529.84
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	ECEVLPDDTVSTLYNR	EC(UniMod:4)EVLPDDTVSTLYNR	2	EC(UniMod:4)EVLPDDTVSTLYNR2	4767.85	7559.5	10537.4
Q9Z1S7	Q9Z1S7	OMD_RAT	Omd	Osteomodulin	1	ECFCPTNFPTSMYCDNR	EC(UniMod:4)FC(UniMod:4)PTNFPTSMYC(UniMod:4)DNR	3	EC(UniMod:4)FC(UniMod:4)PTNFPTSMYC(UniMod:4)DNR3	80563.1	103533	100917
Q9Z1S7	Q9Z1S7	OMD_RAT	Omd	Osteomodulin	1	ECFCPTNFPTSMYCDNRK	EC(UniMod:4)FC(UniMod:4)PTNFPTSMYC(UniMod:4)DNRK	3	EC(UniMod:4)FC(UniMod:4)PTNFPTSMYC(UniMod:4)DNRK3	258551	305943	280164
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	ECFTYVLK	EC(UniMod:4)FTYVLK	2	EC(UniMod:4)FTYVLK2	32729.3	30828.5	25066.2
Q6AXN3	Q6AXN3	TMED5_RAT	Tmed5	Transmembrane emp24 domain-containing protein 5	1	ECFYQPMPLK	EC(UniMod:4)FYQPMPLK	2	EC(UniMod:4)FYQPMPLK2	102802	96826.3	91473.5
Q8CG09	A0A0G2K5H6;Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	0	ECGAPSELLQQR	EC(UniMod:4)GAPSELLQQR	2	EC(UniMod:4)GAPSELLQQR2	44611.7	45292.3	39261.3
A0A8I6AZI9	A0A8I6AZI9	A0A8I6AZI9_RAT	Ubash3a	Ubiquitin associated and SH3 domain containing, A	1	ECGDFAQLVR	EC(UniMod:4)GDFAQLVR	2	EC(UniMod:4)GDFAQLVR2	12643.7	7244.38	3667.1
D3ZP13	D3ZP13	D3ZP13_RAT	Qsox2	Sulfhydryl oxidase	1	ECGEHFEEMAK	EC(UniMod:4)GEHFEEMAK	3	EC(UniMod:4)GEHFEEMAK3	7239.45	7187.07	8693.3
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	ECGILADPEGPFR	EC(UniMod:4)GILADPEGPFR	2	EC(UniMod:4)GILADPEGPFR2	319064	272232	328194
Q63737	A0A8I6A6H0;Q63737	PHLP_RAT	Pdcl	Phosducin-like protein	0	ECGMMDK	EC(UniMod:4)GMMDK	2	EC(UniMod:4)GMMDK2	62467.6	52072.7	59872.5
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	ECGSDGICISDLILDVR	EC(UniMod:4)GSDGIC(UniMod:4)ISDLILDVR	2	EC(UniMod:4)GSDGIC(UniMod:4)ISDLILDVR2	13384.3	24986.5	30965.1
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	ECGSDGICISDLILDVR	EC(UniMod:4)GSDGIC(UniMod:4)ISDLILDVR	3	EC(UniMod:4)GSDGIC(UniMod:4)ISDLILDVR3	16067	14666.8	15793
Q2LC84	Q2LC84	NUMB_RAT	Numb	Protein numb homolog	1	ECGVTATFDASR	EC(UniMod:4)GVTATFDASR	2	EC(UniMod:4)GVTATFDASR2	10736.8	15712.3	18847.4
P62944	A0A8I5ZZX8;P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	ECHLNADTVSSK	EC(UniMod:4)HLNADTVSSK	2	EC(UniMod:4)HLNADTVSSK2	10931.3	5369.8	7553.54
P62944	A0A8I5ZZX8;P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	ECHLNADTVSSK	EC(UniMod:4)HLNADTVSSK	3	EC(UniMod:4)HLNADTVSSK3	44632.7	40772.8	51860.2
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	ECHQLAYADEAK	EC(UniMod:4)HQLAYADEAK	2	EC(UniMod:4)HQLAYADEAK2	16388.3	17293.2	14177.3
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	ECHQLAYADEAK	EC(UniMod:4)HQLAYADEAK	3	EC(UniMod:4)HQLAYADEAK3	174032	219096	76209.3
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	ECHQLAYADEAKK	EC(UniMod:4)HQLAYADEAKK	3	EC(UniMod:4)HQLAYADEAKK3	11143.8	19849.1	36365.1
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	ECHQLAYADEAKK	EC(UniMod:4)HQLAYADEAKK	4	EC(UniMod:4)HQLAYADEAKK4	29789.3	69925.6	22631.7
Q4G063	Q4G063	CREL2_RAT	Creld2	Protein disulfide isomerase Creld2	1	ECIAGYTK	EC(UniMod:4)IAGYTK	1	EC(UniMod:4)IAGYTK1	1722.81	1819.53	577.59
Q4G063	Q4G063	CREL2_RAT	Creld2	Protein disulfide isomerase Creld2	1	ECIAGYTK	EC(UniMod:4)IAGYTK	2	EC(UniMod:4)IAGYTK2	291014	284194	286819
Q3B7D2	Q3B7D2	SPTC2_RAT	Sptlc2	Serine palmitoyltransferase 2	1	ECIQQLAENTR	EC(UniMod:4)IQQLAENTR	2	EC(UniMod:4)IQQLAENTR2	9742.83	10460.1	3841.6
D3ZV82	D3ZV82	D3ZV82_RAT	Gbp7	Similar to guanylate binding protein family, member 6	1	ECIRHFFPR	EC(UniMod:4)IRHFFPR	2	EC(UniMod:4)IRHFFPR2			6270.05
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ECISDNK	EC(UniMod:4)ISDNK	2	EC(UniMod:4)ISDNK2			58502.8
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	ECKEYCGVPGDGYEELTR	EC(UniMod:4)KEYC(UniMod:4)GVPGDGYEELTR	3	EC(UniMod:4)KEYC(UniMod:4)GVPGDGYEELTR3	30477.5	22087.3	19651.4
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	ECKEYCGVPGDGYEELTRS	EC(UniMod:4)KEYC(UniMod:4)GVPGDGYEELTRS	3	EC(UniMod:4)KEYC(UniMod:4)GVPGDGYEELTRS3	45964.7	59157.9	44582.1
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	ECLAPFSGGSFFEHEGR	EC(UniMod:4)LAPFSGGSFFEHEGR	3	EC(UniMod:4)LAPFSGGSFFEHEGR3	54589.6	41317	43102.4
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	ECLAPFSGGSFFEHEGRPLCENHFHAQR	EC(UniMod:4)LAPFSGGSFFEHEGRPLC(UniMod:4)ENHFHAQR	4	EC(UniMod:4)LAPFSGGSFFEHEGRPLC(UniMod:4)ENHFHAQR4	14078.4	22132.2	10852.1
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	ECLCCFQHIDFVTAIAFHPR	EC(UniMod:4)LC(UniMod:4)C(UniMod:4)FQHIDFVTAIAFHPR	3	EC(UniMod:4)LC(UniMod:4)C(UniMod:4)FQHIDFVTAIAFHPR3	1677.69	5078.1	3820.95
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	ECLCCFQHIDFVTAIAFHPR	EC(UniMod:4)LC(UniMod:4)C(UniMod:4)FQHIDFVTAIAFHPR	4	EC(UniMod:4)LC(UniMod:4)C(UniMod:4)FQHIDFVTAIAFHPR4	50133.1	50787.6	45983.6
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	ECLDQLMK	EC(UniMod:4)LDQLMK	2	EC(UniMod:4)LDQLMK2	14541.7	24068.7	17807.5
M0R8H5	M0R8H5	M0R8H5_RAT	Lrg1	Leucine-rich alpha-2-glycoprotein 1	1	ECLILQSVK	EC(UniMod:4)LILQSVK	2	EC(UniMod:4)LILQSVK2	14312.9	6693.28	8475.24
Q641Z2	Q641Z2	PTN9_RAT	Ptpn9	Tyrosine-protein phosphatase non-receptor type 9	1	ECLPENLGGYIK	EC(UniMod:4)LPENLGGYIK	2	EC(UniMod:4)LPENLGGYIK2	13190.4	10356.1	8339.59
P62703	P62703	RS4X_RAT	Rps4x	Small ribosomal subunit protein eS4	1	ECLPLIIFLR	EC(UniMod:4)LPLIIFLR	2	EC(UniMod:4)LPLIIFLR2	10106.3	4157.24	4000.99
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	ECLPMPSLNAPAQYCNICSAK	EC(UniMod:4)LPMPSLNAPAQYC(UniMod:4)NIC(UniMod:4)SAK	3	EC(UniMod:4)LPMPSLNAPAQYC(UniMod:4)NIC(UniMod:4)SAK3	6230.17	2235.31	11645.4
Q64303	Q64303	PAK2_RAT	Pak2	Serine/threonine-protein kinase PAK 2	1	ECLQALEFLHANQVIHR	EC(UniMod:4)LQALEFLHANQVIHR	4	EC(UniMod:4)LQALEFLHANQVIHR4	9979.74	7175.87	
Q62921	Q62921	HOIL1_RAT	Rbck1	RanBP-type and C3HC4-type zinc finger-containing protein 1	1	ECLQGTIR	EC(UniMod:4)LQGTIR	2	EC(UniMod:4)LQGTIR2	14662.4	13414	14497
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	ECLQTCR	EC(UniMod:4)LQTC(UniMod:4)R	1	EC(UniMod:4)LQTC(UniMod:4)R1		286228	
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	ECLQTCR	EC(UniMod:4)LQTC(UniMod:4)R	2	EC(UniMod:4)LQTC(UniMod:4)R2	198682	191408	196016
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	ECLQTCRTIAACNLPIVQGPCR	EC(UniMod:4)LQTC(UniMod:4)RTIAAC(UniMod:4)NLPIVQGPC(UniMod:4)R	3	EC(UniMod:4)LQTC(UniMod:4)RTIAAC(UniMod:4)NLPIVQGPC(UniMod:4)R3	44567.2	38143	38231.4
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	ECLQTCRTIAACNLPIVQGPCR	EC(UniMod:4)LQTC(UniMod:4)RTIAAC(UniMod:4)NLPIVQGPC(UniMod:4)R	4	EC(UniMod:4)LQTC(UniMod:4)RTIAAC(UniMod:4)NLPIVQGPC(UniMod:4)R4	41912.4	34126	20528.5
D4A2N2	D4A2N2	D4A2N2_RAT	Inpp5b	phosphoinositide 5-phosphatase	1	ECLRPWLSSDTK	EC(UniMod:4)LRPWLSSDTK	3	EC(UniMod:4)LRPWLSSDTK3	7248.89	10947.5	8293.13
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	ECLSNGVWSGSEPICR	EC(UniMod:4)LSNGVWSGSEPIC(UniMod:4)R	2	EC(UniMod:4)LSNGVWSGSEPIC(UniMod:4)R2	24490.9	16891.5	16382.8
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	ECLSNGVWSGSEPICR	EC(UniMod:4)LSNGVWSGSEPIC(UniMod:4)R	3	EC(UniMod:4)LSNGVWSGSEPIC(UniMod:4)R3	5873.82	6463.38	7992.83
A0A0G2JU49	A0A0G2JU49	A0A0G2JU49_RAT	Mtx1	Metaxin 1	1	ECLTLLSHR	EC(UniMod:4)LTLLSHR	2	EC(UniMod:4)LTLLSHR2	4022.76	6900.76	4447.29
A0A8I5ZYD8	A0A8I5ZYD8	A0A8I5ZYD8_RAT	Fhl3	Four and a half LIM domains 3	1	ECLVCTGCQTPLAGQQFTSR	EC(UniMod:4)LVC(UniMod:4)TGC(UniMod:4)QTPLAGQQFTSR	3	EC(UniMod:4)LVC(UniMod:4)TGC(UniMod:4)QTPLAGQQFTSR3	229303	243657	206048
Q4QR80	Q4QR80	RT25_RAT	Mrps25	Small ribosomal subunit protein mS25	1	ECMCEVEGQVPCPGLVPLPK	EC(UniMod:4)MC(UniMod:4)EVEGQVPC(UniMod:4)PGLVPLPK	3	EC(UniMod:4)MC(UniMod:4)EVEGQVPC(UniMod:4)PGLVPLPK3	2410.42	3512.25	2660.99
P51646	P51646	ARL5A_RAT	Arl5a	ADP-ribosylation factor-like protein 5A	1	ECMTVAEISQFLK	EC(UniMod:4)MTVAEISQFLK	2	EC(UniMod:4)MTVAEISQFLK2	12498.8	16345.5	12124.8
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	ECNNPEPQR	EC(UniMod:4)NNPEPQR	2	EC(UniMod:4)NNPEPQR2			26589.7
P20760	P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	1	ECNPCGCTGSEVSSVFIFPPK	EC(UniMod:4)NPC(UniMod:4)GC(UniMod:4)TGSEVSSVFIFPPK	3	EC(UniMod:4)NPC(UniMod:4)GC(UniMod:4)TGSEVSSVFIFPPK3	478375	517516	637274
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	ECNSPGCGWDGGDCSLNVDDPWR	EC(UniMod:4)NSPGC(UniMod:4)GWDGGDC(UniMod:4)SLNVDDPWR	3	EC(UniMod:4)NSPGC(UniMod:4)GWDGGDC(UniMod:4)SLNVDDPWR3	4190.71	4481.23	9575
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	ECNSYVYFQGAECEECCLACHK	EC(UniMod:4)NSYVYFQGAEC(UniMod:4)EEC(UniMod:4)C(UniMod:4)LAC(UniMod:4)HK	3	EC(UniMod:4)NSYVYFQGAEC(UniMod:4)EEC(UniMod:4)C(UniMod:4)LAC(UniMod:4)HK3	44616.1	37659.6	34132.9
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	ECNSYVYFQGAECEECCLACHKK	EC(UniMod:4)NSYVYFQGAEC(UniMod:4)EEC(UniMod:4)C(UniMod:4)LAC(UniMod:4)HKK	4	EC(UniMod:4)NSYVYFQGAEC(UniMod:4)EEC(UniMod:4)C(UniMod:4)LAC(UniMod:4)HKK4	7514.86	21434	13073.9
Q9QYW3	Q9QYW3	PHOCN_RAT	Mob4	MOB-like protein phocein	1	ECPAIDYTR	EC(UniMod:4)PAIDYTR	2	EC(UniMod:4)PAIDYTR2	532305	559385	602533
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	ECPDGSDESPETCMSVTCR	EC(UniMod:4)PDGSDESPETC(UniMod:4)MSVTC(UniMod:4)R	3	EC(UniMod:4)PDGSDESPETC(UniMod:4)MSVTC(UniMod:4)R3	6468.9	3048.87	1530.75
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	ECPIVGFR	EC(UniMod:4)PIVGFR	2	EC(UniMod:4)PIVGFR2	409415	410697	451686
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	ECPLAQLMDSETDMVR	EC(UniMod:4)PLAQLMDSETDMVR	2	EC(UniMod:4)PLAQLMDSETDMVR2	9710.51	2567.02	5884.67
D3ZU52	D3ZU52	D3ZU52_RAT	Cops7b	COP9 signalosome subunit 7B	1	ECPPHTEQR	EC(UniMod:4)PPHTEQR	2	EC(UniMod:4)PPHTEQR2			14422.3
P62982	F1LU69;P62982	RS27A_RAT	Rps27a	Ubiquitin-ribosomal protein eS31 fusion protein	0	ECPSDECGAGVFMGSHFDR	EC(UniMod:4)PSDEC(UniMod:4)GAGVFMGSHFDR	3	EC(UniMod:4)PSDEC(UniMod:4)GAGVFMGSHFDR3	89526.5	104240	120094
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	ECPVPNVQNSPIPTK	EC(UniMod:4)PVPNVQNSPIPTK	2	EC(UniMod:4)PVPNVQNSPIPTK2	11985.5	12985.3	9825.25
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	ECPVPNVQNSPIPTKLPEPVK	EC(UniMod:4)PVPNVQNSPIPTKLPEPVK	3	EC(UniMod:4)PVPNVQNSPIPTKLPEPVK3	16848.6	15235.3	19424.3
O35977	O35977	O35977_RAT	Gfra2	GDNF family receptor alpha-2	1	ECQAALEVLQESPLYDCR	EC(UniMod:4)QAALEVLQESPLYDC(UniMod:4)R	3	EC(UniMod:4)QAALEVLQESPLYDC(UniMod:4)R3	6938.17	8852.71	3307.35
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	ECQALVQQALHR	EC(UniMod:4)QALVQQALHR	2	EC(UniMod:4)QALVQQALHR2	1398.95	1786.52	
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	ECQALVQQALHR	EC(UniMod:4)QALVQQALHR	3	EC(UniMod:4)QALVQQALHR3	14362.3	7032.25	6443.86
Q4G063	Q4G063	CREL2_RAT	Creld2	Protein disulfide isomerase Creld2	1	ECQGGSERPCSGNGYCSGDGSR	EC(UniMod:4)QGGSERPC(UniMod:4)SGNGYC(UniMod:4)SGDGSR	3	EC(UniMod:4)QGGSERPC(UniMod:4)SGNGYC(UniMod:4)SGDGSR3	14510.4	18116.6	15976.5
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	ECQPPAAGDPQAK	EC(UniMod:4)QPPAAGDPQAK	2	EC(UniMod:4)QPPAAGDPQAK2	46006.3	38981	33376.3
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	ECQSNGQWQTPR	EC(UniMod:4)QSNGQWQTPR	2	EC(UniMod:4)QSNGQWQTPR2	10670.8	9438.81	3971.29
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	ECQVLFLAGK	EC(UniMod:4)QVLFLAGK	2	EC(UniMod:4)QVLFLAGK2	6525.5	3446.54	2134.6
Q6IMX7	Q6IMX7	HPBP1_RAT	Hspbp1	Hsp70-binding protein 1	1	ECREPELGLEELLR	EC(UniMod:4)REPELGLEELLR	3	EC(UniMod:4)REPELGLEELLR3	3413.53	3832.14	5509.3
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	ECSALGGLFQTIISDMK	EC(UniMod:4)SALGGLFQTIISDMK	2	EC(UniMod:4)SALGGLFQTIISDMK2	13083.7	6137.3	
A0A8I5ZKJ3	A0A8I5ZKJ3	A0A8I5ZKJ3_RAT	Ndufa2	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2	1	ECSEVQPK	EC(UniMod:4)SEVQPK	2	EC(UniMod:4)SEVQPK2			42578.5
A0A8I6ARV9	A0A8I6ARV9	A0A8I6ARV9_RAT	Ctsa	Carboxypeptidase	1	ECSHITFLTIK	EC(UniMod:4)SHITFLTIK	2	EC(UniMod:4)SHITFLTIK2	1437.62	1898.02	2048.11
A0A8I6ARV9	A0A8I6ARV9	A0A8I6ARV9_RAT	Ctsa	Carboxypeptidase	1	ECSHITFLTIK	EC(UniMod:4)SHITFLTIK	3	EC(UniMod:4)SHITFLTIK3	30849.7	21571.3	25211.4
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	ECSIPLLHQDLVVFPR	EC(UniMod:4)SIPLLHQDLVVFPR	2	EC(UniMod:4)SIPLLHQDLVVFPR2	45562	44541.2	37630.5
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	ECSIPLLHQDLVVFPR	EC(UniMod:4)SIPLLHQDLVVFPR	3	EC(UniMod:4)SIPLLHQDLVVFPR3	941130	907730	851367
B2GV38	B2GV38	UBL4A_RAT	Ubl4a	Ubiquitin-like protein 4A	1	ECSLQVAEDELVSTLK	EC(UniMod:4)SLQVAEDELVSTLK	2	EC(UniMod:4)SLQVAEDELVSTLK2	49481.6	37981.1	47672.2
B2GV38	B2GV38	UBL4A_RAT	Ubl4a	Ubiquitin-like protein 4A	1	ECSLQVAEDELVSTLK	EC(UniMod:4)SLQVAEDELVSTLK	3	EC(UniMod:4)SLQVAEDELVSTLK3	37853.3	21585.6	36678.4
D3ZRI9	D3ZRI9	D3ZRI9_RAT	Gan	Gigaxonin	1	ECSNIPLSQPQQGEAMLASFKPR	EC(UniMod:4)SNIPLSQPQQGEAMLASFKPR	3	EC(UniMod:4)SNIPLSQPQQGEAMLASFKPR3	40886.9	29546.8	20709.8
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	ECSTCEIDR	EC(UniMod:4)STC(UniMod:4)EIDR	2	EC(UniMod:4)STC(UniMod:4)EIDR2	10175.9	16113.9	21970.9
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	ECSTCEIDRER	EC(UniMod:4)STC(UniMod:4)EIDRER	3	EC(UniMod:4)STC(UniMod:4)EIDRER3	76898.7	61585.4	101730
A0A8I5ZZZ6	A0A8I5ZZZ6	A0A8I5ZZZ6_RAT	Riok3	Serine/threonine-protein kinase RIO3	1	ECTLVHADLSEYNMLWHAGK	EC(UniMod:4)TLVHADLSEYNMLWHAGK	4	EC(UniMod:4)TLVHADLSEYNMLWHAGK4	5144.48	6603.42	4746.72
A0A8I6ABQ2	A0A8I6ABQ2	A0A8I6ABQ2_RAT	Bcl2l13	BCL2 like 13	1	ECTVETAVHASGWNK	EC(UniMod:4)TVETAVHASGWNK	3	EC(UniMod:4)TVETAVHASGWNK3	14133.2	11351.9	17604.5
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	ECTWAISSTPGHR	EC(UniMod:4)TWAISSTPGHR	3	EC(UniMod:4)TWAISSTPGHR3	11105.6	14635.4	
Q62796	Q62796	RBP1_RAT	Ralbp1	RalA-binding protein 1	1	ECVDYMEK	EC(UniMod:4)VDYMEK	2	EC(UniMod:4)VDYMEK2	3402.54	5630.82	
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	ECVEEVCSK	EC(UniMod:4)VEEVC(UniMod:4)SK	2	EC(UniMod:4)VEEVC(UniMod:4)SK2	3160.06	3875.68	
Q6AYY8	Q6AYY8	ACATN_RAT	Slc33a1	Acetyl-coenzyme A transporter 1	1	ECVGASNQNCR	EC(UniMod:4)VGASNQNC(UniMod:4)R	2	EC(UniMod:4)VGASNQNC(UniMod:4)R2			20985.2
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	ECVGSPDPDLEPGEAN	EC(UniMod:4)VGSPDPDLEPGEAN	2	EC(UniMod:4)VGSPDPDLEPGEAN2	13699	13834.6	9643.82
Q4G002	A0A0G2KA93;Q4G002	Q4G002_RAT	RT1-T24-4	Histocompatibility 2, T region locus 24	0	ECVLWLK	EC(UniMod:4)VLWLK	2	EC(UniMod:4)VLWLK2	14104.6	15885.3	10128.6
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	ECVSQSPTCYK	EC(UniMod:4)VSQSPTC(UniMod:4)YK	2	EC(UniMod:4)VSQSPTC(UniMod:4)YK2	8031.76	10843.8	13093.7
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	ECVYTHDPAGLNVLK	EC(UniMod:4)VYTHDPAGLNVLK	3	EC(UniMod:4)VYTHDPAGLNVLK3	7964.07	6471.32	4416.7
Q66H62	A0A8I6A0L1;Q66H62	CYLD_RAT	Cyld	Ubiquitin carboxyl-terminal hydrolase CYLD	0	ECYDDPDISAGK	EC(UniMod:4)YDDPDISAGK	2	EC(UniMod:4)YDDPDISAGK2	4171.36		1739.08
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	ECYFDTAAPDACDNILAR	EC(UniMod:4)YFDTAAPDAC(UniMod:4)DNILAR	3	EC(UniMod:4)YFDTAAPDAC(UniMod:4)DNILAR3	33653.5	35066.9	39745.7
Q63615	Q63615	VP33A_RAT	Vps33a	Vacuolar protein sorting-associated protein 33A	1	ECYLEGDQTSLYHAAK	EC(UniMod:4)YLEGDQTSLYHAAK	3	EC(UniMod:4)YLEGDQTSLYHAAK3	8622.41	7647.67	10061.3
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	ECYVFKPK	EC(UniMod:4)YVFKPK	2	EC(UniMod:4)YVFKPK2	12214.4	5272.34	7647.17
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	EDAAHQQSLCYVFK	EDAAHQQSLC(UniMod:4)YVFK	2	EDAAHQQSLC(UniMod:4)YVFK2		2065.8	
Q5XIF6	P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9;Q6AY56;F1LUM5	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	EDAANNYAR	EDAANNYAR	2	EDAANNYAR2	2376.54	20900.2	4807.34
Q496Z1	A0A8I5ZKI9;Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	0	EDAATFSSLR	EDAATFSSLR	2	EDAATFSSLR2	32771.6	21359.5	20757.5
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	EDAENLAAAQR	EDAENLAAAQR	2	EDAENLAAAQR2	3640.06		4388.27
G3V7N6	G3V7N6	G3V7N6_RAT	Mboat7	Membrane bound O-acyltransferase domain containing 7-like 1	1	EDAFYARPLPTR	EDAFYARPLPTR	3	EDAFYARPLPTR3	34254.2	31795.2	36284
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	EDAFYSWESSKDPAEQQGK	EDAFYSWESSKDPAEQQGK	3	EDAFYSWESSKDPAEQQGK3	135706	144603	161447
P0C5E3	P0C5E3	PALLD_RAT	Palld	Palladin (Fragment)	1	EDAGWYTVSAK	EDAGWYTVSAK	2	EDAGWYTVSAK2	5030.2	5817.28	9462.77
Q6AYD4	Q6AYD4	ESAM_RAT	Esam	Endothelial cell-selective adhesion molecule	1	EDAIAPR	EDAIAPR	2	EDAIAPR2	108850	107067	114350
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	EDAIHFLQNEK	EDAIHFLQNEK	3	EDAIHFLQNEK3		1621.07	
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	EDAMVEFVK	EDAMVEFVK	2	EDAMVEFVK2	92882.7	97748.8	101135
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	EDAPIGPHLQSMPSEQIR	EDAPIGPHLQSMPSEQIR	3	EDAPIGPHLQSMPSEQIR3	303497	293855	315130
Q91XU8	Q91XU8	CDS2_RAT	Cds2	Phosphatidate cytidylyltransferase 2	1	EDAPPEDKESESEAK	EDAPPEDKESESEAK	2	EDAPPEDKESESEAK2	4612.55		7685.67
Q91XU8	Q91XU8	CDS2_RAT	Cds2	Phosphatidate cytidylyltransferase 2	1	EDAPPEDKESESEAK	EDAPPEDKESESEAK	3	EDAPPEDKESESEAK3			36285.8
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	EDASDLLLNK	EDASDLLLNK	2	EDASDLLLNK2	29160.8	33679.8	24797
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	EDASDLLLNKK	EDASDLLLNKK	2	EDASDLLLNKK2	1786.53	867.418	4776.61
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	EDASDLLLNKK	EDASDLLLNKK	3	EDASDLLLNKK3	18127.5	22084.1	26438.2
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	EDASPAPGTTAEEAMSR	EDASPAPGTTAEEAMSR	2	EDASPAPGTTAEEAMSR2	11519.1	14417.8	11894.3
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	EDATAGSQAGGGVR	EDATAGSQAGGGVR	2	EDATAGSQAGGGVR2	37532.5	39952.7	34026
Q5XIF3	Q5XIF3	NDUS4_RAT	Ndufs4	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial	1	EDAVAFAEK	EDAVAFAEK	2	EDAVAFAEK2	71618	70256.2	74280
O35763	O35763	MOES_RAT	Msn	Moesin	1	EDAVLEYLK	EDAVLEYLK	2	EDAVLEYLK2	75849.7	68055.1	76019.6
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	EDCDRYALQSQQR	EDC(UniMod:4)DRYALQSQQR	3	EDC(UniMod:4)DRYALQSQQR3	3764.54	8954.43	8679.05
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	EDCEDTGAEEANELTK	EDC(UniMod:4)EDTGAEEANELTK	2	EDC(UniMod:4)EDTGAEEANELTK2	2375.98	4093.35	
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	EDCNFALGQLAK	EDC(UniMod:4)NFALGQLAK	2	EDC(UniMod:4)NFALGQLAK2	33747.9	37336.9	32301.4
P31652	P31652	SC6A4_RAT	Slc6a4	Sodium-dependent serotonin transporter	1	EDCQENGVLQK	EDC(UniMod:4)QENGVLQK	2	EDC(UniMod:4)QENGVLQK2	3891.34	3407.35	6629.2
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	EDCSPDDFIDVIVGNR	EDC(UniMod:4)SPDDFIDVIVGNR	2	EDC(UniMod:4)SPDDFIDVIVGNR2		1766.23	
P30836	P30836	LYAM1_RAT	Sell	L-selectin	1	EDCVEIYIK	EDC(UniMod:4)VEIYIK	2	EDC(UniMod:4)VEIYIK2	20493	11911.4	13285.5
A0A0G2KA54	P08932;A0A0G2KA54	A0A0G2KA54_RAT	Kng1	Kininogen 1	0	EDCVPLPYGDHGECR	EDC(UniMod:4)VPLPYGDHGEC(UniMod:4)R	2	EDC(UniMod:4)VPLPYGDHGEC(UniMod:4)R2	7926.57	5760.11	8323.41
A0A0G2KA54	P08932;A0A0G2KA54	A0A0G2KA54_RAT	Kng1	Kininogen 1	0	EDCVPLPYGDHGECR	EDC(UniMod:4)VPLPYGDHGEC(UniMod:4)R	3	EDC(UniMod:4)VPLPYGDHGEC(UniMod:4)R3	266909	183263	167515
Q6AYP5	Q6AYP5	CADM1_RAT	Cadm1	Cell adhesion molecule 1	1	EDDGVPVICQVEHPAVTGNLQTQR	EDDGVPVIC(UniMod:4)QVEHPAVTGNLQTQR	3	EDDGVPVIC(UniMod:4)QVEHPAVTGNLQTQR3	70574.5	54723.3	76487.1
G3V8S6	G3V8S6	G3V8S6_RAT	Hrc	Histidine rich calcium binding protein	1	EDDHSSQEGDEDLK	EDDHSSQEGDEDLK	2	EDDHSSQEGDEDLK2	1501.16		
G3V8S6	G3V8S6	G3V8S6_RAT	Hrc	Histidine rich calcium binding protein	1	EDDHSSQEGDEDLK	EDDHSSQEGDEDLK	3	EDDHSSQEGDEDLK3	6048.48		
Q4KLL4	Q4KLL4	TM9S4_RAT	Tm9sf4	Transmembrane 9 superfamily member 4	1	EDDIEDTMEESGWK	EDDIEDTMEESGWK	2	EDDIEDTMEESGWK2	13013.6	12848.3	13534.8
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	EDDIFAAPSFDDK	EDDIFAAPSFDDK	2	EDDIFAAPSFDDK2	135750	167016	152963
P29411	P29411	KAD3_RAT	Ak3	GTP:AMP phosphotransferase AK3, mitochondrial	1	EDDKPETVIK	EDDKPETVIK	2	EDDKPETVIK2	2640.37	5289.68	4721.54
P29411	P29411	KAD3_RAT	Ak3	GTP:AMP phosphotransferase AK3, mitochondrial	1	EDDKPETVIK	EDDKPETVIK	3	EDDKPETVIK3	12227	11871	13129.1
A0A0G2K1D2	A0A0G2K1D2	A0A0G2K1D2_RAT	Rap1gds1	Rap1 GTPase-GDP dissociation stimulator 1	1	EDDLAELK	EDDLAELK	2	EDDLAELK2	3515.39	5209.77	
Q6P691	Q6P691	Q6P691_RAT	C2cd2	C2 calcium-dependent domain containing 2	1	EDDLDSWDLEK	EDDLDSWDLEK	2	EDDLDSWDLEK2	6932.14	10548.6	6993.24
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	EDDLETAEK	EDDLETAEK	2	EDDLETAEK2	32663.2	29944.3	40642
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	EDDLGAVEEQR	EDDLGAVEEQR	2	EDDLGAVEEQR2	9160.92	10894.1	9509.51
B0BNI5	B0BNI5	OLFL3_RAT	Olfml3	Olfactomedin-like protein 3	1	EDDRHLCLAK	EDDRHLC(UniMod:4)LAK	3	EDDRHLC(UniMod:4)LAK3	4031.25	9087.89	3917.02
P08721	P08721	OSTP_RAT	Spp1	Osteopontin	1	EDDRYLK	EDDRYLK	2	EDDRYLK2	4866.32	2544.24	8557.03
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	EDDVGTGAGLLEIK	EDDVGTGAGLLEIK	2	EDDVGTGAGLLEIK2	8033.99	4630.42	6887.24
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	EDEDFQESNK	EDEDFQESNK	2	EDEDFQESNK2	57261.2	24465.7	23409.2
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	EDEEESLNEVGYDDIGGCRK	EDEEESLNEVGYDDIGGC(UniMod:4)RK	3	EDEEESLNEVGYDDIGGC(UniMod:4)RK3	6457.39	4747.5	6762.14
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	EDEELSCDHYCHNYIGGYYCSCR	EDEELSC(UniMod:4)DHYC(UniMod:4)HNYIGGYYC(UniMod:4)SC(UniMod:4)R	4	EDEELSC(UniMod:4)DHYC(UniMod:4)HNYIGGYYC(UniMod:4)SC(UniMod:4)R4	2962.46	1840.03	
P97881	P97881	MUC13_RAT	Muc13	Mucin-13	1	EDEESVASVIK	EDEESVASVIK	2	EDEESVASVIK2	9431.32	7843.67	10064.4
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	EDEEYKR	EDEEYKR	2	EDEEYKR2			1664.92
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	EDEGEEAASPMLQIQR	EDEGEEAASPMLQIQR	2	EDEGEEAASPMLQIQR2	117814	161986	132248
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	EDEGEEAASPMLQIQR	EDEGEEAASPMLQIQR	3	EDEGEEAASPMLQIQR3	50172.4	57988.1	46199
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	EDEGEITK	EDEGEITK	1	EDEGEITK1	12300	9183.09	13563.8
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	EDEGEITK	EDEGEITK	2	EDEGEITK2	788241	960283	
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	EDEGLLR	EDEGLLR	2	EDEGLLR2	57130.1	56352.5	49536.9
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	EDEGWYWCGVK	EDEGWYWC(UniMod:4)GVK	2	EDEGWYWC(UniMod:4)GVK2	34912.8	39134.9	45833.9
Q6U6G5	Q6U6G5	ZC3HF_RAT	Zc3h15	Zinc finger CCCH domain-containing protein 15	1	EDEISLEDLIER	EDEISLEDLIER	2	EDEISLEDLIER2	19847.1	21414.1	16762.7
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	EDEKDDKPIR	EDEKDDKPIR	3	EDEKDDKPIR3			31398.8
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	EDELLCLFGESPPHSAR	EDELLC(UniMod:4)LFGESPPHSAR	2	EDELLC(UniMod:4)LFGESPPHSAR2	8060.46		8701.83
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	EDELLCLFGESPPHSAR	EDELLC(UniMod:4)LFGESPPHSAR	3	EDELLC(UniMod:4)LFGESPPHSAR3	40934.3	35469.1	41493.7
A0A1W2Q642	A0A1W2Q642	A0A1W2Q642_RAT	Pi16	Peptidase inhibitor 16	1	EDELPEAEVELPEAEAELPEAK	EDELPEAEVELPEAEAELPEAK	3	EDELPEAEVELPEAEAELPEAK3	13348.7	7932.39	8298.34
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	EDELSLVK	EDELSLVK	2	EDELSLVK2	14203.6	15257.5	10336.7
Q5BJQ2	Q5BJQ2	MINY1_RAT	Mindy1	Ubiquitin carboxyl-terminal hydrolase MINDY-1	1	EDELSVFFR	EDELSVFFR	2	EDELSVFFR2	61027.3	64116.8	68747.4
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	EDEMPVGR	EDEMPVGR	2	EDEMPVGR2	21669.3	23094.5	24132.1
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	EDENLGSVK	EDENLGSVK	2	EDENLGSVK2	36072.8	32790.2	34083.4
P63322	P63322	RALA_RAT	Rala	Ras-related protein Ral-A	1	EDENVPFLLVGNK	EDENVPFLLVGNK	2	EDENVPFLLVGNK2	204497	172449	195850
P63322	P63322	RALA_RAT	Rala	Ras-related protein Ral-A	1	EDENVPFLLVGNK	EDENVPFLLVGNK	3	EDENVPFLLVGNK3	2298.15	5358.63	4867
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	EDEPSVGQVAR	EDEPSVGQVAR	2	EDEPSVGQVAR2	838752	767699	882233
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	EDESIRPFK	EDESIRPFK	2	EDESIRPFK2	7739.28	4732.83	4939.04
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	EDETFPCDLIFLSSNR	EDETFPC(UniMod:4)DLIFLSSNR	2	EDETFPC(UniMod:4)DLIFLSSNR2	26122.9		30679.7
P53987	P53987	MOT1_RAT	Slc16a1	Monocarboxylate transporter 1	1	EDETSTDVDEKPK	EDETSTDVDEKPK	2	EDETSTDVDEKPK2	15594.9		14960.3
P53987	P53987	MOT1_RAT	Slc16a1	Monocarboxylate transporter 1	1	EDETSTDVDEKPK	EDETSTDVDEKPK	3	EDETSTDVDEKPK3	15204		27092.1
P53987	P53987	MOT1_RAT	Slc16a1	Monocarboxylate transporter 1	1	EDETSTDVDEKPKK	EDETSTDVDEKPKK	2	EDETSTDVDEKPKK2			2322.13
P53987	P53987	MOT1_RAT	Slc16a1	Monocarboxylate transporter 1	1	EDETSTDVDEKPKK	EDETSTDVDEKPKK	3	EDETSTDVDEKPKK3			5618.36
P31977	P31977	EZRI_RAT	Ezr	Ezrin	1	EDEVEEWQHR	EDEVEEWQHR	2	EDEVEEWQHR2	1741.65		
P31977	P31977	EZRI_RAT	Ezr	Ezrin	1	EDEVEEWQHR	EDEVEEWQHR	3	EDEVEEWQHR3	8448.81	1899.08	
Q5BK07	Q5BK07	CCD43_RAT	Ccdc43	Coiled-coil domain-containing protein 43	1	EDEVQAITTLIEK	EDEVQAITTLIEK	2	EDEVQAITTLIEK2	12842.6	10989.6	12238.7
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	EDFDVDHFVSDCR	EDFDVDHFVSDC(UniMod:4)R	3	EDFDVDHFVSDC(UniMod:4)R3	3800.14	3706.24	2345.15
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	EDFDVDHFVSDCRK	EDFDVDHFVSDC(UniMod:4)RK	4	EDFDVDHFVSDC(UniMod:4)RK4	2907.45		3476.34
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	EDFDVEPADSEGNCHDSLTFAAK	EDFDVEPADSEGNC(UniMod:4)HDSLTFAAK	3	EDFDVEPADSEGNC(UniMod:4)HDSLTFAAK3	306195	335707	318279
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	EDFEIIK	EDFEIIK	2	EDFEIIK2	21234	26796.2	20586.2
Q71RP1	Q71RP1	HPSE_RAT	Hpse	Heparanase	1	EDFLSSDVLDTFILSVQK	EDFLSSDVLDTFILSVQK	3	EDFLSSDVLDTFILSVQK3	8663.72	4531.99	9953.99
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	EDFLSVSDIIDYFRK	EDFLSVSDIIDYFRK	3	EDFLSVSDIIDYFRK3		4633.86	9999.96
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	EDFLVYK	EDFLVYK	2	EDFLVYK2	33765.9	26878.8	29617.9
D3Z9L0	D3Z9L0	D3Z9L0_RAT	Agk	Acylglycerol kinase, mitochondrial	1	EDFMNICIEPDTVSK	EDFMNIC(UniMod:4)IEPDTVSK	2	EDFMNIC(UniMod:4)IEPDTVSK2	7721.15	5833.38	8079.58
A0A0G2KA54	P08932;A0A0G2KA54	A0A0G2KA54_RAT	Kng1	Kininogen 1	0	EDFPFLR	EDFPFLR	2	EDFPFLR2	102725	128014	113362
A0A0G2KA54	P08932;A0A0G2KA54	A0A0G2KA54_RAT	Kng1	Kininogen 1	0	EDFPFLREDCVPLPYGDHGECR	EDFPFLREDC(UniMod:4)VPLPYGDHGEC(UniMod:4)R	3	EDFPFLREDC(UniMod:4)VPLPYGDHGEC(UniMod:4)R3	38310.3	35177.7	19587.9
A0A0G2KA54	P08932;A0A0G2KA54	A0A0G2KA54_RAT	Kng1	Kininogen 1	0	EDFPFLREDCVPLPYGDHGECR	EDFPFLREDC(UniMod:4)VPLPYGDHGEC(UniMod:4)R	4	EDFPFLREDC(UniMod:4)VPLPYGDHGEC(UniMod:4)R4	124194	135715	139102
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	EDFPLIETEDK	EDFPLIETEDK	2	EDFPLIETEDK2	38204.7	28938.8	25992.7
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	EDFPSLHEDCVPLPSGDDGECK	EDFPSLHEDC(UniMod:4)VPLPSGDDGEC(UniMod:4)K	3	EDFPSLHEDC(UniMod:4)VPLPSGDDGEC(UniMod:4)K3	1.67274e+07	1.54248e+07	1.5471e+07
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	EDFPSLHEDCVPLPSGDDGECK	EDFPSLHEDC(UniMod:4)VPLPSGDDGEC(UniMod:4)K	4	EDFPSLHEDC(UniMod:4)VPLPSGDDGEC(UniMod:4)K4	3344.93	5295.52	5208.94
P01048	P01048	KNT1_RAT	Map1	T-kininogen 1	1	EDFPSLR	EDFPSLR	2	EDFPSLR2	223342	243818	222042
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	EDFSSLSAQLLYK	EDFSSLSAQLLYK	2	EDFSSLSAQLLYK2	33455.9	32963.8	45029.2
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	EDFTLSDFINAVK	EDFTLSDFINAVK	2	EDFTLSDFINAVK2	4643.97	11760.3	6536.01
Q9JLU4	Q9JLU4	SHAN3_RAT	Shank3	SH3 and multiple ankyrin repeat domains protein 3	1	EDFVELGVTR	EDFVELGVTR	2	EDFVELGVTR2	6253.8	3004.11	
D4A0J7	D4A0J7	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	1	EDFYTVETITSGSSCK	EDFYTVETITSGSSC(UniMod:4)K	2	EDFYTVETITSGSSC(UniMod:4)K2	35133.2	34066.6	38361.9
D4A0J7	D4A0J7	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	1	EDFYTVETITSGSSCK	EDFYTVETITSGSSC(UniMod:4)K	3	EDFYTVETITSGSSC(UniMod:4)K3	38338.3	35541.6	36345.4
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	EDGAISTIVLR	EDGAISTIVLR	2	EDGAISTIVLR2	128428	110117	131737
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	EDGGGWWYNR	EDGGGWWYNR	2	EDGGGWWYNR2	206911	168209	192801
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	EDGGGWWYNR	EDGGGWWYNR	3	EDGGGWWYNR3	47585.5	34139.5	33767.2
O08775	O08775	VGFR2_RAT	Kdr	Vascular endothelial growth factor receptor 2	1	EDGGLYTCQACNVLGCAR	EDGGLYTC(UniMod:4)QAC(UniMod:4)NVLGC(UniMod:4)AR	3	EDGGLYTC(UniMod:4)QAC(UniMod:4)NVLGC(UniMod:4)AR3	3538.91	9756.27	3669.7
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	EDGGPPSLER	EDGGPPSLER	2	EDGGPPSLER2	726416	798752	735982
O88658	O88658;F1M4A4	KIF1B_RAT	Kif1b	Kinesin-like protein KIF1B	0	EDGGTLGVFSPK	EDGGTLGVFSPK	2	EDGGTLGVFSPK2	9771.58	10289.8	10475.4
O88994	O88994	MARC2_RAT	Mtarc2	Mitochondrial amidoxime reducing component 2	1	EDGHMITAR	EDGHMITAR	2	EDGHMITAR2	6756.06	4007.39	15199.9
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	EDGIAAEIPLASHIPEER	EDGIAAEIPLASHIPEER	3	EDGIAAEIPLASHIPEER3	12636.8	15818.7	9674.19
Q99MI5	Q99MI5	Q99MI5_RAT	Srm	Spermidine synthase	1	EDGILCCQGECQWLHLDLIK	EDGILC(UniMod:4)C(UniMod:4)QGEC(UniMod:4)QWLHLDLIK	3	EDGILC(UniMod:4)C(UniMod:4)QGEC(UniMod:4)QWLHLDLIK3	3503.41		
Q920J4	Q920J4	TXNL1_RAT	Txnl1	Thioredoxin-like protein 1	1	EDGIVPLR	EDGIVPLR	2	EDGIVPLR2	27461.6	23025.3	26960.6
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	EDGLETWTETAAPSCPK	EDGLETWTETAAPSC(UniMod:4)PK	2	EDGLETWTETAAPSC(UniMod:4)PK2	7548.72	8994.44	7151.07
Q5XI81	Q5XI81	FXR1_RAT	Fxr1	RNA-binding protein FXR1	1	EDGMVPFVFVGTK	EDGMVPFVFVGTK	2	EDGMVPFVFVGTK2	27497.6	22221.5	28784.9
P62961	A0A8I5ZRA5;A0A8I6GL75;P62961;D3ZEV0;A0A8I5ZPD8	YBOX1_RAT	Ybx1	Y-box-binding protein 1	0	EDGNEEDKENQGDETQGQQPPQR	EDGNEEDKENQGDETQGQQPPQR	3	EDGNEEDKENQGDETQGQQPPQR3	9062.35		10337.7
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	EDGPGIPAEIK	EDGPGIPAEIK	2	EDGPGIPAEIK2	34782.5	29217.2	20803.2
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	EDGPWIPYQYYSGSCENTYSK	EDGPWIPYQYYSGSC(UniMod:4)ENTYSK	3	EDGPWIPYQYYSGSC(UniMod:4)ENTYSK3	16226.6	16642.9	21136.8
Q6VV72	Q6VV72;A0A8I6A8I7	IF1A_RAT	Eif1a	Eukaryotic translation initiation factor 1A	0	EDGQEYAQVIK	EDGQEYAQVIK	2	EDGQEYAQVIK2	46446.2	49554.1	39916.9
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	EDGRPLPSGAQQR	EDGRPLPSGAQQR	3	EDGRPLPSGAQQR3	101034	111371	95564.2
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	EDGSCLALVK	EDGSC(UniMod:4)LALVK	2	EDGSC(UniMod:4)LALVK2	14812.8	18660.6	26890.1
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	EDGSHILTVGIGSK	EDGSHILTVGIGSK	3	EDGSHILTVGIGSK3	9439.38	9871.07	10041.8
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	EDGSIIIVPATQTAIVQLLQGEHMLR	EDGSIIIVPATQTAIVQLLQGEHMLR	3	EDGSIIIVPATQTAIVQLLQGEHMLR3	6286.01	7101.87	3845.95
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	EDGSLDFQR	EDGSLDFQR	2	EDGSLDFQR2	271703	222277	282278
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	EDGSSSGNYR	EDGSSSGNYR	2	EDGSSSGNYR2			5717.97
O35462	O35462	ANGP2_RAT	Angpt2	Angiopoietin-2	1	EDGSVDFQR	EDGSVDFQR	2	EDGSVDFQR2	13324.6	15886	11373.6
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	EDGTGIELTGTGSCEIANTLSK	EDGTGIELTGTGSC(UniMod:4)EIANTLSK	3	EDGTGIELTGTGSC(UniMod:4)EIANTLSK3	102629	85606.3	83151.3
D4A0T9	D4A0T9	D4A0T9_RAT	Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	1	EDGTVSLCLLGSCR	EDGTVSLC(UniMod:4)LLGSC(UniMod:4)R	2	EDGTVSLC(UniMod:4)LLGSC(UniMod:4)R2	9830.36	3784.12	4112.67
A0A0G2K3L8	A0A0G2K3L8	A0A0G2K3L8_RAT	Wdfy1	WD repeat and FYVE domain containing 1	1	EDGVITASEDR	EDGVITASEDR	2	EDGVITASEDR2	13141.4	16287.7	20975.1
Q6AYA5	Q6AYA5	T106B_RAT	Tmem106b	Transmembrane protein 106B	1	EDGYDGVTSTDNMR	EDGYDGVTSTDNMR	2	EDGYDGVTSTDNMR2		6940.91	2519.58
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	EDGYDHR	EDGYDHR	2	EDGYDHR2			341901
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	EDGYSDASGFGYCFR	EDGYSDASGFGYC(UniMod:4)FR	2	EDGYSDASGFGYC(UniMod:4)FR2	35057.1	56804.3	61729.7
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	EDGYYFLLQER	EDGYYFLLQER	2	EDGYYFLLQER2	28513.8	34886.4	31177.4
A0A8I5ZTW6	A0A8I5ZTW6	A0A8I5ZTW6_RAT	Gopc	Golgi associated PDZ and coiled-coil motif containing	1	EDHEGLGISITGGK	EDHEGLGISITGGK	3	EDHEGLGISITGGK3	13546.2	16652.5	9126.03
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	EDHLVPER	EDHLVPER	2	EDHLVPER2	222638	255412	215481
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	EDHLVPERSTSILVMLTDGDANTGESRPEK	EDHLVPERSTSILVMLTDGDANTGESRPEK	4	EDHLVPERSTSILVMLTDGDANTGESRPEK4	31218.8	31878.6	18909.7
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	EDHPPLLDR	EDHPPLLDR	2	EDHPPLLDR2	33458.5	18541.1	33273.9
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	EDHPPLLDRR	EDHPPLLDRR	3	EDHPPLLDRR3	86985.3	80655.7	80871.5
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	EDHWYLEDR	EDHWYLEDR	2	EDHWYLEDR2	15934.6	22011.9	22736.7
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	EDHWYLEDR	EDHWYLEDR	3	EDHWYLEDR3	135391	149236	136588
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	EDIDAAVK	EDIDAAVK	2	EDIDAAVK2	83989.8	77410.9	77395.7
Q9WVK7	Q9WVK7	HCDH_RAT	Hadh	Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial	1	EDIDTAMK	EDIDTAMK	2	EDIDTAMK2	35175.5	30922.5	36778.3
A0A8I6A5H5	A0A8I6A5H5	A0A8I6A5H5_RAT	Rela	RELA proto-oncogene, NF-kB subunit	1	EDIEVYFTGPGWEAR	EDIEVYFTGPGWEAR	2	EDIEVYFTGPGWEAR2	13242.2	8956.08	3344.91
P83888	P83888	TBG1_RAT	Tubg1	Tubulin gamma-1 chain	1	EDIFKDNFDEMDTSR	EDIFKDNFDEMDTSR	3	EDIFKDNFDEMDTSR3	11684.3	12950.4	8049.58
D3Z8E0	F1M7N7;D3Z8E0	D3Z8E0_RAT	Rps6ka3	Ribosomal protein S6 kinase	0	EDIGVGSYSVCK	EDIGVGSYSVC(UniMod:4)K	2	EDIGVGSYSVC(UniMod:4)K2	8571.91	6289.66	1401.97
P08650	P08650	CO5_RAT	C5	Complement C5	1	EDIKEDEK	EDIKEDEK	2	EDIKEDEK2			52301.5
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	EDILEFIK	EDILEFIK	2	EDILEFIK2	2689.21	4769.01	2397.23
B2GV15	B2GV15	B2GV15_RAT	Dbt	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	EDILNFLEK	EDILNFLEK	2	EDILNFLEK2	23967	22616.7	20207.5
Q5U318	Q5U318	PEA15_RAT	Pea15	Astrocytic phosphoprotein PEA-15	1	EDIPSEK	EDIPSEK	2	EDIPSEK2	17326.8	18197	
D3ZRI9	D3ZRI9	D3ZRI9_RAT	Gan	Gigaxonin	1	EDIQGSEMVTCK	EDIQGSEMVTC(UniMod:4)K	2	EDIQGSEMVTC(UniMod:4)K2		1942.71	
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	EDIQSVMTEVR	EDIQSVMTEVR	2	EDIQSVMTEVR2	208905	250697	211357
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	EDIQSVMTEVRR	EDIQSVMTEVRR	3	EDIQSVMTEVRR3	44941.1	72188	82780.7
A0A8I5Y0Y2	A0A8I5Y0Y2	A0A8I5Y0Y2_RAT	Ddi2	DNA damage inducible 1 homolog 2	1	EDIRPEEIADQELAEAIQK	EDIRPEEIADQELAEAIQK	3	EDIRPEEIADQELAEAIQK3	6245.5	6038.61	5789.07
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	EDITQEFPGK	EDITQEFPGK	2	EDITQEFPGK2	22943.3	22352.1	20869.7
Q9JIL3	Q9JIL3	ILF3_RAT	Ilf3	Interleukin enhancer-binding factor 3	1	EDITQSAQHALR	EDITQSAQHALR	3	EDITQSAQHALR3	6581.22	8217.03	10243.2
Q63663	Q63663	GBP2_RAT	Gbp2	Guanylate-binding protein 2	1	EDIVETLLK	EDIVETLLK	2	EDIVETLLK2	21350.6	24052.2	27226.2
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	EDIYAVEIVGGATR	EDIYAVEIVGGATR	2	EDIYAVEIVGGATR2	124064	108812	103539
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	EDIYAVEIVGGATR	EDIYAVEIVGGATR	3	EDIYAVEIVGGATR3	29285.6	30646.4	36918.6
D3ZS97	D3ZS97	D3ZS97_RAT	Cd226	CD226 molecule	1	EDIYVNYPTFSR	EDIYVNYPTFSR	2	EDIYVNYPTFSR2	39420.6	35270	40160.8
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	EDKAPQVDVDR	EDKAPQVDVDR	3	EDKAPQVDVDR3	45088.9	39629.8	36867.5
Q9EPF2	Q9EPF2	MUC18_RAT	Mcam	Cell surface glycoprotein MUC18	1	EDKDAQFYCELSYR	EDKDAQFYC(UniMod:4)ELSYR	3	EDKDAQFYC(UniMod:4)ELSYR3	8917.96	6193.55	10231.3
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	EDKDGSLEVTGQLGDVMK	EDKDGSLEVTGQLGDVMK	3	EDKDGSLEVTGQLGDVMK3	18825.3	13642.6	22050.3
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	EDKEAFAIVCVPLSEVR	EDKEAFAIVC(UniMod:4)VPLSEVR	3	EDKEAFAIVC(UniMod:4)VPLSEVR3	24373.2	9115.6	19633.6
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	EDKEAFAIVPVSPAEVR	EDKEAFAIVPVSPAEVR	2	EDKEAFAIVPVSPAEVR2	3395.68		8033.73
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	EDKEAFAIVPVSPAEVR	EDKEAFAIVPVSPAEVR	3	EDKEAFAIVPVSPAEVR3	33564.3	40736	52405.3
Q6AY56	Q68FR8;Q6AY56;F1LUM5	TBA8_RAT	Tuba8	Tubulin alpha-8 chain	0	EDLAALEK	EDLAALEK	2	EDLAALEK2	290041	341659	340024
F1LUQ0	F1LUQ0	F1LUQ0_RAT	Mcub	Calcium uniporter regulatory subunit MCUb	1	EDLAEATESLENVR	EDLAEATESLENVR	2	EDLAEATESLENVR2	6245.33		
A0A8I5YC01	A0A8I5YC01	A0A8I5YC01_RAT	Gimap1	GTPase, IMAP family member 1	1	EDLAGDSLQDYVR	EDLAGDSLQDYVR	2	EDLAGDSLQDYVR2	6957.53	6527.2	7409.54
P02454	P02454	CO1A1_RAT	Col1a1	Collagen alpha-1(I) chain	1	EDLDCPNPQK	EDLDC(UniMod:4)PNPQK	2	EDLDC(UniMod:4)PNPQK2	50320.3	34166.6	29945.3
Q9WTQ2	Q9WTQ2	PODXL_RAT	Podxl	Podocalyxin	1	EDLDEEEDTHL	EDLDEEEDTHL	2	EDLDEEEDTHL2	312126	342722	317312
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	EDLDVLGLSFR	EDLDVLGLSFR	2	EDLDVLGLSFR2	4538.23	6940.56	6509.24
P29066	P29066	ARRB1_RAT	Arrb1	Beta-arrestin-1	1	EDLDVLGLTFR	EDLDVLGLTFR	2	EDLDVLGLTFR2	7985.62	7318.18	4874.1
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	EDLECLIQEQMK	EDLEC(UniMod:4)LIQEQMK	2	EDLEC(UniMod:4)LIQEQMK2	32922.9	38688.8	36907.9
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	EDLECLIQEQMKK	EDLEC(UniMod:4)LIQEQMKK	3	EDLEC(UniMod:4)LIQEQMKK3	6426.16	9330.52	22096.6
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	EDLELAMK	EDLELAMK	2	EDLELAMK2	19474.6	18798	16158.9
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	EDLEPVVK	EDLEPVVK	2	EDLEPVVK2	15679		10042.6
Q9QYC6	Q9QYC6	GPR37_RAT	Gpr37	Prosaposin receptor GPR37	1	EDLGFSGQAPAER	EDLGFSGQAPAER	2	EDLGFSGQAPAER2	4173.5	8824.85	7744.28
Q64122	Q64122;P18666	MYL9_RAT	Myl9	Myosin regulatory light polypeptide 9	0	EDLHDMLASLGK	EDLHDMLASLGK	2	EDLHDMLASLGK2	9802.96	7749.42	8657.06
Q64122	Q64122;P18666	MYL9_RAT	Myl9	Myosin regulatory light polypeptide 9	0	EDLHDMLASLGK	EDLHDMLASLGK	3	EDLHDMLASLGK3	25128.3	16989.4	21886.6
P13832	P13832	MRLCA_RAT	Rlc-a	Myosin regulatory light chain RLC-A	1	EDLHDMLASMGK	EDLHDMLASMGK	3	EDLHDMLASMGK3	9970.29	22037.5	10534.9
A0A8I5ZU29	A0A8I5ZU29;A0A8I6A7J6;A0A8L2UM24;B4F777	A0A8I5ZU29_RAT	LOC120097335	High mobility group nucleosome-binding domain-containing protein 5-like	0	EDLHEEEGK	EDLHEEEGK	2	EDLHEEEGK2			700.054
A0A8I5ZU29	A0A8I5ZU29;A0A8I6A7J6;A0A8L2UM24;B4F777	A0A8I5ZU29_RAT	LOC120097335	High mobility group nucleosome-binding domain-containing protein 5-like	0	EDLHEEEGKEDLHEEEGK	EDLHEEEGKEDLHEEEGK	4	EDLHEEEGKEDLHEEEGK4	3220.32	9388.44	2404
Q4KLN3	Q4KLN3	Q4KLN3_RAT	Srpk1	SRSF protein kinase 1	1	EDLHNANDCDGR	EDLHNANDC(UniMod:4)DGR	3	EDLHNANDC(UniMod:4)DGR3			3371.95
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	EDLIWEILK	EDLIWEILK	2	EDLIWEILK2	2.66018e+06	2.40341e+06	2.21891e+06
A0A0G2JVT8	A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	1	EDLLLQEENCR	EDLLLQEENC(UniMod:4)R	2	EDLLLQEENC(UniMod:4)R2	8917.04	11009.7	6803.73
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	EDLLQADFEGALK	EDLLQADFEGALK	2	EDLLQADFEGALK2		13813.2	
A0A8I5ZSB0	A0A8I5ZSB0	A0A8I5ZSB0_RAT	Igtp	Interferon gamma induced GTPase	1	EDLMFTK	EDLMFTK	2	EDLMFTK2	9543.35	13326.7	5093.25
A0A8J8YNR6	Q80WE1;A0A8J8YNR6	A0A8J8YNR6_RAT	Fxr2	FMR1 autosomal homolog 2	0	EDLMGLAIGTHGANIQQAR	EDLMGLAIGTHGANIQQAR	3	EDLMGLAIGTHGANIQQAR3	42484.3	29416	29111
Q5XI81	Q5XI81	FXR1_RAT	Fxr1	RNA-binding protein FXR1	1	EDLMGLAIGTHGSNIQQAR	EDLMGLAIGTHGSNIQQAR	3	EDLMGLAIGTHGSNIQQAR3	55490.5	58718.3	48665.5
Q5RK09	Q5RK09	EIF3G_RAT	Eif3g	Eukaryotic translation initiation factor 3 subunit G	1	EDLNCQEEEDPMNK	EDLNC(UniMod:4)QEEEDPMNK	2	EDLNC(UniMod:4)QEEEDPMNK2	55666.4	52344.9	52979.8
Q5RK09	Q5RK09	EIF3G_RAT	Eif3g	Eukaryotic translation initiation factor 3 subunit G	1	EDLNCQEEEDPMNK	EDLNC(UniMod:4)QEEEDPMNK	3	EDLNC(UniMod:4)QEEEDPMNK3	2509.47		2110.36
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	EDLNYHDPTVK	EDLNYHDPTVK	2	EDLNYHDPTVK2	2671.42	1534.03	5913.13
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	EDLPGFVFESNR	EDLPGFVFESNR	2	EDLPGFVFESNR2	23164.4	24688.1	25093.7
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	EDLQELNDR	EDLQELNDR	2	EDLQELNDR2	31158.5	22846.6	17341.5
Q3T1J1	Q3T1J1	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	1	EDLRLPEGDLGK	EDLRLPEGDLGK	2	EDLRLPEGDLGK2	128212	83949.3	69771.2
Q3T1J1	Q3T1J1	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	1	EDLRLPEGDLGK	EDLRLPEGDLGK	3	EDLRLPEGDLGK3	120799	113055	108770
Q3T1J1	Q3T1J1	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	1	EDLRLPEGDLGKEIEQK	EDLRLPEGDLGKEIEQK	3	EDLRLPEGDLGKEIEQK3	6293.14	7322.83	8312.2
Q3T1J1	Q3T1J1	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	1	EDLRLPEGDLGKEIEQK	EDLRLPEGDLGKEIEQK	4	EDLRLPEGDLGKEIEQK4	58986	77912.9	77665
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	EDLSCPK	EDLSC(UniMod:4)PK	2	EDLSC(UniMod:4)PK2	631326	754891	626491
P08460	P08460	NID1_RAT	Nid1	Nidogen-1 (Fragment)	1	EDLSPFIIQMAAEYVQR	EDLSPFIIQMAAEYVQR	3	EDLSPFIIQMAAEYVQR3	4449		
Q6AXS4	Q6AXS4	RENR_RAT	Atp6ap2	Renin receptor	1	EDLSWPGLAVGNLFHRPR	EDLSWPGLAVGNLFHRPR	3	EDLSWPGLAVGNLFHRPR3	17516.5	13102.9	13042.7
Q6AXS4	Q6AXS4	RENR_RAT	Atp6ap2	Renin receptor	1	EDLSWPGLAVGNLFHRPR	EDLSWPGLAVGNLFHRPR	4	EDLSWPGLAVGNLFHRPR4	19856.9	22329.4	16081.5
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	EDLTDLEQAGSPR	EDLTDLEQAGSPR	2	EDLTDLEQAGSPR2	14898.2	10409.8	10542.6
P19945	D3ZJT4;P19945	RLA0_RAT	Rplp0	Large ribosomal subunit protein uL10	0	EDLTEIR	EDLTEIR	2	EDLTEIR2	150215	133975	157146
P19945	P19945	RLA0_RAT	Rplp0	Large ribosomal subunit protein uL10	1	EDLTEIRDMLLANK	EDLTEIRDMLLANK	3	EDLTEIRDMLLANK3	13450.7	34461.7	36707.4
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	EDLVCSAALHSPQESPVGK	EDLVC(UniMod:4)SAALHSPQESPVGK	3	EDLVC(UniMod:4)SAALHSPQESPVGK3	13601.2	18136.2	
P45592	M0RC65;P45592	COF1_RAT	Cfl1	Cofilin-1	0	EDLVFIFWAPESAPLK	EDLVFIFWAPESAPLK	2	EDLVFIFWAPESAPLK2	20064.1	15410.2	2237.79
O08774	O08774	RGS12_RAT	Rgs12	Regulator of G-protein signaling 12	1	EDLVLPEFLR	EDLVLPEFLR	2	EDLVLPEFLR2	9196.11	12032.5	9901.03
A0A8I6GFC7	A0A8I6GFC7	A0A8I6GFC7_RAT	Ubp1	Upstream binding protein 1	1	EDLVQICGAADGIR	EDLVQIC(UniMod:4)GAADGIR	2	EDLVQIC(UniMod:4)GAADGIR2		9314.51	8220.6
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	EDLVSAGQR	EDLVSAGQR	2	EDLVSAGQR2	136421	111609	158652
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	EDLVYQAK	EDLVYQAK	2	EDLVYQAK2	92717.1	62158.5	98412
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	EDLYLKPIQR	EDLYLKPIQR	2	EDLYLKPIQR2	2443.45	2883.9	3224.48
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	EDLYLKPIQR	EDLYLKPIQR	3	EDLYLKPIQR3	58807	56850.1	58835.3
Q5XIF6	P68370;Q5XIF6;Q6AYZ1;Q6P9V9	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	EDMAALEK	EDMAALEK	1	EDMAALEK1	242527	254165	280739
Q5XIF6	P68370;Q5XIF6;Q6AYZ1;Q6P9V9	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	EDMAALEK	EDMAALEK	2	EDMAALEK2	1.29545e+07	1.41806e+07	1.52524e+07
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	EDMAVHVR	EDMAVHVR	2	EDMAVHVR2	5643.25	5507.99	7410.81
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	EDMESVLDK	EDMESVLDK	2	EDMESVLDK2	24182.2	22382.7	29919.1
Q9JJ74	Q9JJ74	RAMP1_RAT	Ramp1	Receptor activity-modifying protein 1	1	EDMETIGK	EDMETIGK	2	EDMETIGK2	32201	30872.1	
Q9WVB1	Q9WVB1	RAB6A_RAT	Rab6a	Ras-related protein Rab-6A	1	EDMIDIK	EDMIDIK	2	EDMIDIK2	42628.5	30441.3	45882.2
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	EDMPIINSFFK	EDMPIINSFFK	2	EDMPIINSFFK2	10218.3	12095.6	16063.4
D4A9L2	D4A9L2	D4A9L2_RAT	Srsf1	Serine/arginine-rich splicing factor 1	1	EDMTYAVR	EDMTYAVR	2	EDMTYAVR2	7938.72	6867.93	6965.45
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	EDMVQATSETR	EDMVQATSETR	2	EDMVQATSETR2	288021	218375	295715
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	EDNEGLVK	EDNEGLVK	2	EDNEGLVK2	13288.7	7077.67	13091.5
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	EDNNLSLQEK	EDNNLSLQEK	2	EDNNLSLQEK2	63103.8	57765.2	54834.2
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	EDNNNLFSVQFR	EDNNNLFSVQFR	2	EDNNNLFSVQFR2	14693.6	9150.32	13490.2
Q63257	Q63257	IL4RA_RAT	Il4r	Interleukin-4 receptor subunit alpha	1	EDNPAEFK	EDNPAEFK	2	EDNPAEFK2	8356.74	6382.16	
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	EDNPLPR	EDNPLPR	2	EDNPLPR2	203722	208993	213725
P15684	P15684	AMPN_RAT	Anpep	Aminopeptidase N	1	EDNSATGFGSGTR	EDNSATGFGSGTR	2	EDNSATGFGSGTR2	4027.96	5038.92	
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	EDNSIHWER	EDNSIHWER	2	EDNSIHWER2	1.56058e+06	916023	866690
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	EDNSIHWER	EDNSIHWER	3	EDNSIHWER3	5.75191e+06	4.32537e+06	4.80167e+06
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	EDNSIHWERPQK	EDNSIHWERPQK	2	EDNSIHWERPQK2	1805.88	2598.26	
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	EDNSIHWERPQK	EDNSIHWERPQK	3	EDNSIHWERPQK3	90685.1	30019.5	45541.5
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	EDNSIHWERPQK	EDNSIHWERPQK	4	EDNSIHWERPQK4	187889	121689	120945
Q6IE52	Q6IE52;A0A8I6AG69	MUG2_RAT	Mug2	Murinoglobulin-2	0	EDNSIHWERPQKPMK	EDNSIHWERPQKPMK	3	EDNSIHWERPQKPMK3	31894.5	35588.3	14371.5
Q6IE52	Q6IE52;A0A8I6AG69	MUG2_RAT	Mug2	Murinoglobulin-2	0	EDNSIHWERPQKPMK	EDNSIHWERPQKPMK	4	EDNSIHWERPQKPMK4	104012	96932.2	81292.4
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	EDNSIHWERPQKPTK	EDNSIHWERPQKPTK	3	EDNSIHWERPQKPTK3	5.11828e+06	3.44179e+06	3.24304e+06
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	EDNSIHWERPQKPTK	EDNSIHWERPQKPTK	4	EDNSIHWERPQKPTK4	106214	76750.4	98494.5
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	EDNVIRK	EDNVIRK	2	EDNVIRK2	91464.8		13959.9
P58751	P58751	RELN_RAT	Reln	Reelin	1	EDNWFFYPGGNIGLYCPYSSK	EDNWFFYPGGNIGLYC(UniMod:4)PYSSK	3	EDNWFFYPGGNIGLYC(UniMod:4)PYSSK3	13400	18416.8	6638.14
D3ZF97	D3ZF97	D3ZF97_RAT	Erlec1	Endoplasmic reticulum lectin	1	EDNYIIMTTAHK	EDNYIIMTTAHK	3	EDNYIIMTTAHK3	8927.8	14470.1	10618.4
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	EDPAYLHYYDPAGGEDPLGAIHLR	EDPAYLHYYDPAGGEDPLGAIHLR	3	EDPAYLHYYDPAGGEDPLGAIHLR3	234185	197373	215980
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	EDPAYLHYYDPAGGEDPLGAIHLR	EDPAYLHYYDPAGGEDPLGAIHLR	4	EDPAYLHYYDPAGGEDPLGAIHLR4	2.48472e+06	2.52848e+06	2.67395e+06
P01026	P01026	CO3_RAT	C3	Complement C3	1	EDPECAK	EDPEC(UniMod:4)AK	2	EDPEC(UniMod:4)AK2			22357.3
P01026	P01026	CO3_RAT	C3	Complement C3	1	EDPECAKPAAR	EDPEC(UniMod:4)AKPAAR	2	EDPEC(UniMod:4)AKPAAR2			4275.58
P01026	P01026	CO3_RAT	C3	Complement C3	1	EDPECAKPAAR	EDPEC(UniMod:4)AKPAAR	3	EDPEC(UniMod:4)AKPAAR3			20934.1
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	EDPEDKDHGTPSSPFAGVVLK	EDPEDKDHGTPSSPFAGVVLK	4	EDPEDKDHGTPSSPFAGVVLK4	19002.2	23462.9	19608.5
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	EDPEDKDHGTPSSPFAGVVLKPAASR	EDPEDKDHGTPSSPFAGVVLKPAASR	3	EDPEDKDHGTPSSPFAGVVLKPAASR3	55238.7	64744.4	60762.5
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	EDPEDKDHGTPSSPFAGVVLKPAASR	EDPEDKDHGTPSSPFAGVVLKPAASR	4	EDPEDKDHGTPSSPFAGVVLKPAASR4	1.08821e+06	1.08035e+06	1.0827e+06
Q4QQV2	Q4QQV2	DOK1_RAT	Dok1	Docking protein 1	1	EDPIYDEPEGLAPAPLR	EDPIYDEPEGLAPAPLR	2	EDPIYDEPEGLAPAPLR2	58229.9	53143.9	54864.1
Q4QQV2	Q4QQV2	DOK1_RAT	Dok1	Docking protein 1	1	EDPIYDEPEGLAPAPLR	EDPIYDEPEGLAPAPLR	3	EDPIYDEPEGLAPAPLR3	24860.4	23972.6	21041.6
P12075	P12075	COX5B_RAT	Cox5b	Cytochrome c oxidase subunit 5B, mitochondrial	1	EDPNLVPSVSNK	EDPNLVPSVSNK	2	EDPNLVPSVSNK2	854470	757435	781344
P12075	P12075	COX5B_RAT	Cox5b	Cytochrome c oxidase subunit 5B, mitochondrial	1	EDPNLVPSVSNKR	EDPNLVPSVSNKR	2	EDPNLVPSVSNKR2	17717	26626	17900.3
P12075	P12075	COX5B_RAT	Cox5b	Cytochrome c oxidase subunit 5B, mitochondrial	1	EDPNLVPSVSNKR	EDPNLVPSVSNKR	3	EDPNLVPSVSNKR3	101446	109265	117284
P37136	P37136	ACES_RAT	Ache	Acetylcholinesterase	1	EDPQLLVR	EDPQLLVR	2	EDPQLLVR2	96083.3	112273	91699.8
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	EDPSGWWTGR	EDPSGWWTGR	2	EDPSGWWTGR2	21377.4	26719.5	25869
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	EDPTAVACTFSCVMK	EDPTAVAC(UniMod:4)TFSC(UniMod:4)VMK	2	EDPTAVAC(UniMod:4)TFSC(UniMod:4)VMK2	74890.7	88555.9	82813.2
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	EDPTAVACTFSCVMK	EDPTAVAC(UniMod:4)TFSC(UniMod:4)VMK	3	EDPTAVAC(UniMod:4)TFSC(UniMod:4)VMK3	15269.7	11567.8	12936.2
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	EDPTQVVR	EDPTQVVR	2	EDPTQVVR2	42055.4	40004.8	32172.5
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	EDQAANTSCGLPLK	EDQAANTSC(UniMod:4)GLPLK	2	EDQAANTSC(UniMod:4)GLPLK2	5120.13	2426.09	
Q9R1J4	Q9R1J4	MYOC_RAT	Myoc	Myocilin	1	EDQAMSAIQDLQR	EDQAMSAIQDLQR	2	EDQAMSAIQDLQR2	4775.81	5532.03	
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	EDQFQLSLLAAMGNTQR	EDQFQLSLLAAMGNTQR	2	EDQFQLSLLAAMGNTQR2	32344.3	35993.4	40304.6
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	EDQFQLSLLAAMGNTQR	EDQFQLSLLAAMGNTQR	3	EDQFQLSLLAAMGNTQR3	36520.4	62094.3	36778.2
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	EDQGLEADDEK	EDQGLEADDEK	2	EDQGLEADDEK2	4787.32	6077.5	2991.78
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	EDQGLEADDEKDSLK	EDQGLEADDEKDSLK	3	EDQGLEADDEKDSLK3	11840.9	5715.8	9686.63
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	EDQGLEADDEKDSLKK	EDQGLEADDEKDSLKK	3	EDQGLEADDEKDSLKK3	13726	14850.3	5876.3
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	EDQGLEADDEKDSLKK	EDQGLEADDEKDSLKK	4	EDQGLEADDEKDSLKK4	12523.2	19790.8	24039
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	EDQGSEWK	EDQGSEWK	2	EDQGSEWK2	45864.3	67149.6	56444.6
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	EDQIEYHEGLK	EDQIEYHEGLK	2	EDQIEYHEGLK2	2738.79	2269.48	494.427
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	EDQIEYHEGLK	EDQIEYHEGLK	3	EDQIEYHEGLK3	4431.47	3309.69	5150.82
A0A0G2K712	A0A0G2K712	A0A0G2K712_RAT	Tbc1d5	TBC1 domain family, member 5	1	EDQILVSLAGLK	EDQILVSLAGLK	2	EDQILVSLAGLK2	5737.75	11387.2	4719.99
Q62812	F1LNF0;Q63862;Q62812	MYH9_RAT	Myh9	Myosin-9	0	EDQSILCTGESGAGK	EDQSILC(UniMod:4)TGESGAGK	2	EDQSILC(UniMod:4)TGESGAGK2	44216.3	54512.4	53267.8
Q62812	F1LNF0;Q63862;Q62812	MYH9_RAT	Myh9	Myosin-9	0	EDQSILCTGESGAGK	EDQSILC(UniMod:4)TGESGAGK	3	EDQSILC(UniMod:4)TGESGAGK3	54343	41023.5	52873.4
P34058	P82995;P34058;A0A8I5ZRJ6	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	EDQTEYLEER	EDQTEYLEER	2	EDQTEYLEER2	1.95717e+06	2.43267e+06	2.41465e+06
P34058	P82995;P34058;A0A8I5ZRJ6	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	EDQTEYLEERR	EDQTEYLEERR	3	EDQTEYLEERR3	132076	197595	210456
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	EDQVIQLMNTIFSK	EDQVIQLMNTIFSK	2	EDQVIQLMNTIFSK2	21392.4	29947.5	20877
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	EDQVIQLMNTIFSK	EDQVIQLMNTIFSK	3	EDQVIQLMNTIFSK3	5547.45	6019	6000.39
Q5M7W7	Q5M7W7	SYPM_RAT	Pars2	Probable proline--tRNA ligase, mitochondrial	1	EDQVLSLEGR	EDQVLSLEGR	2	EDQVLSLEGR2	7708.21	9106.79	7980.99
A0A8I6ASK6	A0A8I6ASK6	A0A8I6ASK6_RAT	Fcrl1	Fc receptor-like 1	1	EDQVVCK	EDQVVC(UniMod:4)K	1	EDQVVC(UniMod:4)K1	54508.2	44294.2	39726
A0A8I6ASK6	A0A8I6ASK6	A0A8I6ASK6_RAT	Fcrl1	Fc receptor-like 1	1	EDQVVCK	EDQVVC(UniMod:4)K	2	EDQVVC(UniMod:4)K2	1.28907e+06	1.15948e+06	1.34053e+06
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	EDQWMGVTVQSQGPGGK	EDQWMGVTVQSQGPGGK	2	EDQWMGVTVQSQGPGGK2	114340	93752.2	127104
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	EDQWMGVTVQSQGPGGK	EDQWMGVTVQSQGPGGK	3	EDQWMGVTVQSQGPGGK3	96704.1	101426	85454.7
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	EDQYEHLDAADMTK	EDQYEHLDAADMTK	2	EDQYEHLDAADMTK2	23676.5	29350.5	29743
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	EDQYEHLDAADMTK	EDQYEHLDAADMTK	3	EDQYEHLDAADMTK3	516894	522134	538192
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	EDRDVLSYYR	EDRDVLSYYR	3	EDRDVLSYYR3	51441	56046.1	53692.3
P32038	P32038	CFAD_RAT	Cfd	Complement factor D	1	EDREVKPGTLCDVAGWGVVTHAGR	EDREVKPGTLC(UniMod:4)DVAGWGVVTHAGR	4	EDREVKPGTLC(UniMod:4)DVAGWGVVTHAGR4	9093.09	6765.85	11917.2
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	EDRFENNELFAK	EDRFENNELFAK	2	EDRFENNELFAK2	3111.81	1088.8	7454.12
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	EDRFENNELFAK	EDRFENNELFAK	3	EDRFENNELFAK3	71758.3	98838.4	87568.8
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	EDRFQEFSDIVMPLIK	EDRFQEFSDIVMPLIK	3	EDRFQEFSDIVMPLIK3	1495.65	4155.74	7775.84
P10252	P10252	CD48_RAT	Cd48	CD48 antigen	1	EDRGDYYMR	EDRGDYYMR	2	EDRGDYYMR2	54859.9	32966.7	38898.7
P10252	P10252	CD48_RAT	Cd48	CD48 antigen	1	EDRGDYYMR	EDRGDYYMR	3	EDRGDYYMR3	210457	247497	289319
B5DEN9	B5DEN9	VPS28_RAT	Vps28	Vacuolar protein sorting-associated protein 28 homolog	1	EDRPITIKDDK	EDRPITIKDDK	3	EDRPITIKDDK3	5993.43		
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	EDRPQDGTLSTFSWR	EDRPQDGTLSTFSWR	3	EDRPQDGTLSTFSWR3	73998.1	96675.1	87624.6
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	EDRPVSFYQLGSSQFQPNAVSLAR	EDRPVSFYQLGSSQFQPNAVSLAR	3	EDRPVSFYQLGSSQFQPNAVSLAR3	21606.7	16075.6	17453.9
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	EDSAEVLK	EDSAEVLK	2	EDSAEVLK2	139873	128339	154948
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	EDSAEVLKK	EDSAEVLKK	2	EDSAEVLKK2	28048.3	25530.9	15077.4
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	EDSCQLNYSEGPCLGMQQK	EDSC(UniMod:4)QLNYSEGPC(UniMod:4)LGMQQK	3	EDSC(UniMod:4)QLNYSEGPC(UniMod:4)LGMQQK3	9225.89	14989.4	6340.19
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	EDSCVQPQSLLTSQENNSTSSPAR	EDSC(UniMod:4)VQPQSLLTSQENNSTSSPAR	3	EDSC(UniMod:4)VQPQSLLTSQENNSTSSPAR3	38912.1	31613.3	45054.2
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	EDSCWELR	EDSC(UniMod:4)WELR	2	EDSC(UniMod:4)WELR2	8698.6	14820	12140.5
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	EDSEEQTVKPGPEEGTSEEGKGPPTR	EDSEEQTVKPGPEEGTSEEGKGPPTR	4	EDSEEQTVKPGPEEGTSEEGKGPPTR4	6670.54	3040.49	10505.9
P97578	P97578	FEZ2_RAT	Fez2	Fasciculation and elongation protein zeta-2	1	EDSEKVPSLLTDYILK	EDSEKVPSLLTDYILK	2	EDSEKVPSLLTDYILK2	3767.44	1532.03	2001.2
P97578	P97578	FEZ2_RAT	Fez2	Fasciculation and elongation protein zeta-2	1	EDSEKVPSLLTDYILK	EDSEKVPSLLTDYILK	3	EDSEKVPSLLTDYILK3	24458.8	36988.1	33068.8
Q68FQ2	Q68FQ2	JAM3_RAT	Jam3	Junctional adhesion molecule C	1	EDSGQYYCIASNDAGAAR	EDSGQYYC(UniMod:4)IASNDAGAAR	2	EDSGQYYC(UniMod:4)IASNDAGAAR2	619.167	2250.36	
Q4V8C7	Q4V8C7	PRKRA_RAT	Prkra	Interferon-inducible double-stranded RNA-dependent protein kinase activator A	1	EDSGTFSLGK	EDSGTFSLGK	2	EDSGTFSLGK2	4015.16	3664.35	8153.48
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	EDSGWSSAEAR	EDSGWSSAEAR	2	EDSGWSSAEAR2	43506.2	54333.8	49595.1
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	EDSIMEEESPSAVSECSR	EDSIMEEESPSAVSEC(UniMod:4)SR	3	EDSIMEEESPSAVSEC(UniMod:4)SR3	8249.15	9789.89	9339.87
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	EDSIQELLR	EDSIQELLR	2	EDSIQELLR2	213525	173212	182030
P18614	P18614	ITA1_RAT	Itga1	Integrin alpha-1	1	EDSIYEADLQYR	EDSIYEADLQYR	2	EDSIYEADLQYR2	5779.83		5261.42
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	EDSKPVILRPPGNK	EDSKPVILRPPGNK	2	EDSKPVILRPPGNK2	35370.9	20382.7	21765
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	EDSKPVILRPPGNK	EDSKPVILRPPGNK	3	EDSKPVILRPPGNK3	208164	209777	215816
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	EDSKPVILRPPGNK	EDSKPVILRPPGNK	4	EDSKPVILRPPGNK4	31708.4	34843.8	30210.7
Q56AP7	Q56AP7	CRBN_RAT	Crbn	Protein cereblon	1	EDSLPANPIDFSYR	EDSLPANPIDFSYR	2	EDSLPANPIDFSYR2	7496.83	9621.39	10360.9
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	EDSPAQTLASPNACR	EDSPAQTLASPNAC(UniMod:4)R	2	EDSPAQTLASPNAC(UniMod:4)R2	34140.5	35949.5	24388.1
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	EDSPAQTLASPNACR	EDSPAQTLASPNAC(UniMod:4)R	3	EDSPAQTLASPNAC(UniMod:4)R3	16900.6	15234.1	
A0A8I6A9E8	A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	1	EDSPSEDPVFLR	EDSPSEDPVFLR	2	EDSPSEDPVFLR2	21343.6	16337.4	26037.9
P04256	A0A8I6GJN1;P04256	ROA1_RAT	Hnrnpa1	Heterogeneous nuclear ribonucleoprotein A1	0	EDSQRPGAHLTVK	EDSQRPGAHLTVK	3	EDSQRPGAHLTVK3	24387.5	4123.89	
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	EDSSAPVMK	EDSSAPVMK	2	EDSSAPVMK2	29996.8	30572.9	24672.2
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	EDSSAPVMKDENTPK	EDSSAPVMKDENTPK	3	EDSSAPVMKDENTPK3	6992.24	8410.05	6752.46
Q5PQR3	Q5PQR3	BTBD9_RAT	Btbd9	BTB/POZ domain-containing protein 9	1	EDSSEEPGTGDLSTPSQQLDPHAPR	EDSSEEPGTGDLSTPSQQLDPHAPR	3	EDSSEEPGTGDLSTPSQQLDPHAPR3		4703.4	3383.04
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	EDSSSAEFLEK	EDSSSAEFLEK	2	EDSSSAEFLEK2	84164.2	84629.5	81222.5
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	EDSSSAEFLEKR	EDSSSAEFLEKR	3	EDSSSAEFLEKR3		4513.66	5626.88
D4ACD2	D4ACD2	D4ACD2_RAT	Bach1	BTB domain and CNC homolog 1	1	EDSSSLASEDR	EDSSSLASEDR	2	EDSSSLASEDR2	6761.65	11918.3	14235.2
A0A8I6A678	A0A8I6A678	A0A8I6A678_RAT	Snx2	Sorting nexin-2	1	EDSSSTEFVEK	EDSSSTEFVEK	2	EDSSSTEFVEK2	15011.2	18439.1	18902.1
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	EDSTQEDVPAMPALENAGTEEVGPK	EDSTQEDVPAMPALENAGTEEVGPK	3	EDSTQEDVPAMPALENAGTEEVGPK3	13314.9	17360	11500.9
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	EDSTTFASR	EDSTTFASR	2	EDSTTFASR2	5391.08	5793.97	5759.81
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	EDSVEAR	EDSVEAR	2	EDSVEAR2			323323
Q68FQ7	Q68FQ7	RPAP3_RAT	Rpap3	RNA polymerase II-associated protein 3	1	EDSVEELK	EDSVEELK	1	EDSVEELK1	13803.4	10024.5	13986.2
D3ZKG1	D3ZKG1	D3ZKG1_RAT	Mmut	Methylmalonyl-CoA mutase, mitochondrial	1	EDSVEVLAIDNTSVR	EDSVEVLAIDNTSVR	2	EDSVEVLAIDNTSVR2		3127.43	3387.04
Q6URK4	A0A8I6G9V6;D4A6A2;E9PSU5;F1M6C7;Q6URK4;A0A8I6A4C1	ROA3_RAT	Hnrnpa3	Heterogeneous nuclear ribonucleoprotein A3	0	EDSVKPGAHLTVK	EDSVKPGAHLTVK	3	EDSVKPGAHLTVK3	6598.62	12697.3	4300.83
D3ZFJ3	D3ZFJ3	3BP1_RAT	Sh3bp1	SH3 domain-binding protein 1	1	EDSYANYFTHLLEIQADYHR	EDSYANYFTHLLEIQADYHR	4	EDSYANYFTHLLEIQADYHR4	6940.25	6698.25	8748.67
A7VJC2	A7VJC2;A0A8I5ZYJ3;A0A8I6GJN1;P04256	ROA2_RAT	Hnrnpa2b1	Heterogeneous nuclear ribonucleoproteins A2/B1	0	EDTEEHHLR	EDTEEHHLR	2	EDTEEHHLR2			1820.38
A7VJC2	A7VJC2;A0A8I5ZYJ3;A0A8I6GJN1;P04256	ROA2_RAT	Hnrnpa2b1	Heterogeneous nuclear ribonucleoproteins A2/B1	0	EDTEEHHLR	EDTEEHHLR	3	EDTEEHHLR3			30202.2
Q6URK4	D4A6A2;E9PSU5;F1M6C7;Q6URK4;A0A8I6A4C1	ROA3_RAT	Hnrnpa3	Heterogeneous nuclear ribonucleoprotein A3	0	EDTEEYNLR	EDTEEYNLR	2	EDTEEYNLR2	8179.5	4127.42	5235.97
M0R4M1	M0R4M1	M0R4M1_RAT	Nlrc5	NLR family, CARD domain containing 5	1	EDTELLIGALQR	EDTELLIGALQR	2	EDTELLIGALQR2	6904.27	4346.19	8002.41
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	EDTESLEIFQNEVAR	EDTESLEIFQNEVAR	2	EDTESLEIFQNEVAR2	35667.8	34375.8	35206.3
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	EDTESLEIFQNEVAR	EDTESLEIFQNEVAR	3	EDTESLEIFQNEVAR3	32181.3	27385	28591.4
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	EDTETQAVATSPDGR	EDTETQAVATSPDGR	2	EDTETQAVATSPDGR2	9721.06	10983.2	7982.27
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	EDTFLCSPHTCK	EDTFLC(UniMod:4)SPHTC(UniMod:4)K	3	EDTFLC(UniMod:4)SPHTC(UniMod:4)K3	9103.12	12476.9	6150.54
E9PT20	E9PT20;F1M0N1	E9PT20_RAT	Abl1	Tyrosine-protein kinase	0	EDTMEVEEFLK	EDTMEVEEFLK	2	EDTMEVEEFLK2			1752.89
B2RYN3	B2RYN3	B2RYN3_RAT	Eef1e1	Eukaryotic translation elongation factor 1 epsilon 1	1	EDTQTLLK	EDTQTLLK	1	EDTQTLLK1	767.677		1880.63
B2RYN3	B2RYN3	B2RYN3_RAT	Eef1e1	Eukaryotic translation elongation factor 1 epsilon 1	1	EDTQTLLK	EDTQTLLK	2	EDTQTLLK2	5695.04	9905.71	9993.93
D4A3I5	D4A3I5	D4A3I5_RAT	Fhip2a	FHF complex subunit HOOK interacting protein 2A	1	EDTSAFPGK	EDTSAFPGK	2	EDTSAFPGK2	8300.11	8845.84	16566
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	EDTSEEVVPVLVNNWK	EDTSEEVVPVLVNNWK	2	EDTSEEVVPVLVNNWK2	33467.5	45313.4	38773
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	EDTSPEAPPR	EDTSPEAPPR	2	EDTSPEAPPR2	9832.03	15561.9	19730
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	EDTSQAVLSLAAR	EDTSQAVLSLAAR	2	EDTSQAVLSLAAR2	67826.8	67590.8	67558.6
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	EDTSQAVLSLAAR	EDTSQAVLSLAAR	3	EDTSQAVLSLAAR3	1765.74	5608.34	4949.13
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	EDVAWLQSQAQAVYQRPQESGR	EDVAWLQSQAQAVYQRPQESGR	3	EDVAWLQSQAQAVYQRPQESGR3	214825	208069	205572
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	EDVAWLQSQAQAVYQRPQESGR	EDVAWLQSQAQAVYQRPQESGR	4	EDVAWLQSQAQAVYQRPQESGR4	7357.15	5271.15	
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	EDVAWLQSQAQAVYQRPQESGRDDR	EDVAWLQSQAQAVYQRPQESGRDDR	3	EDVAWLQSQAQAVYQRPQESGRDDR3		3264.42	
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	EDVAWLQSQAQAVYQRPQESGRDDR	EDVAWLQSQAQAVYQRPQESGRDDR	4	EDVAWLQSQAQAVYQRPQESGRDDR4	22762.6	13751.7	14078.8
D4A0J7	D4A0J7	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	1	EDVEEIR	EDVEEIR	2	EDVEEIR2	380578	339356	376530
D4A0J7	D4A0J7	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	1	EDVEEIRTELNK	EDVEEIRTELNK	2	EDVEEIRTELNK2	24420.5	14977.4	10804.9
D4A0J7	D4A0J7	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	1	EDVEEIRTELNK	EDVEEIRTELNK	3	EDVEEIRTELNK3	483984	520396	531155
D4A0J7	D4A0J7	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	1	EDVEEIRTELNKR	EDVEEIRTELNKR	3	EDVEEIRTELNKR3		3280.15	7312.86
D4A0J7	D4A0J7	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	1	EDVEEIRTELNKR	EDVEEIRTELNKR	4	EDVEEIRTELNKR4	4955.43	5104.85	3102.9
P04642	P04642	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	1	EDVFLSVPCILGQNGISDVVK	EDVFLSVPC(UniMod:4)ILGQNGISDVVK	3	EDVFLSVPC(UniMod:4)ILGQNGISDVVK3	136088	127798	122475
P62961	A0A8I6GL75;P62961;D3ZEV0;Q62764;A0A8I6ABQ3;D4A3P0	YBOX1_RAT	Ybx1	Y-box-binding protein 1	0	EDVFVHQTAIK	EDVFVHQTAIK	2	EDVFVHQTAIK2	4737.42	2836.59	3977.59
P62961	A0A8I6GL75;P62961;D3ZEV0;Q62764;A0A8I6ABQ3;D4A3P0	YBOX1_RAT	Ybx1	Y-box-binding protein 1	0	EDVFVHQTAIK	EDVFVHQTAIK	3	EDVFVHQTAIK3	93711	73171.1	64752.5
P62961	A0A8I6GL75;P62961;D3ZEV0;Q62764;A0A8I6ABQ3	YBOX1_RAT	Ybx1	Y-box-binding protein 1	0	EDVFVHQTAIKK	EDVFVHQTAIKK	3	EDVFVHQTAIKK3	4393.11	10053.2	13478.1
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	EDVGDEGEEEK	EDVGDEGEEEK	2	EDVGDEGEEEK2		8221.4	5455.88
Q9Z0J5	Q9Z0J5	TRXR2_RAT	Txnrd2	Thioredoxin reductase 2, mitochondrial	1	EDVGTFDTVLWAIGR	EDVGTFDTVLWAIGR	2	EDVGTFDTVLWAIGR2	1206.26	2371.76	3890.08
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	EDVNFQDNEK	EDVNFQDNEK	2	EDVNFQDNEK2	447.049	2261.29	3189.26
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	EDVPMGSSVMTVSAHDEDTGR	EDVPMGSSVMTVSAHDEDTGR	3	EDVPMGSSVMTVSAHDEDTGR3	754.782	1395.06	
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	EDVQDYSEDLQEIK	EDVQDYSEDLQEIK	2	EDVQDYSEDLQEIK2	44182.6	35824.5	37011.9
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	EDVQDYSEDLQEIK	EDVQDYSEDLQEIK	3	EDVQDYSEDLQEIK3	4332.13	8460.32	16342.4
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	EDVQDYSEDLQEIKK	EDVQDYSEDLQEIKK	3	EDVQDYSEDLQEIKK3	3415.17	8061.75	9838.47
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	EDVQISTTQVAEIVATLEKEEK	EDVQISTTQVAEIVATLEKEEK	3	EDVQISTTQVAEIVATLEKEEK3	7391.62		
Q5I6B8	Q5I6B8	PI51C_RAT	Pip5k1c	Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma	1	EDVQYDLR	EDVQYDLR	2	EDVQYDLR2	12004.9	14840.3	13509.1
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	EDVSEGLK	EDVSEGLK	2	EDVSEGLK2	46882.1	55583	50191.7
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	EDVSEGLKK	EDVSEGLKK	2	EDVSEGLKK2	6787.82	4285.87	5192.17
Q5RJR2	Q5RJR2;A0A8I6GGS8	TWF1_RAT	Twf1	Twinfilin-1	0	EDVSLHGYR	EDVSLHGYR	2	EDVSLHGYR2	9028.47	14282.2	8577.95
Q5RJR2	Q5RJR2;A0A8I6GGS8	TWF1_RAT	Twf1	Twinfilin-1	0	EDVSLHGYRK	EDVSLHGYRK	3	EDVSLHGYRK3	81277	71110.7	77176.5
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	EDVSSSTAPEPGFLK	EDVSSSTAPEPGFLK	2	EDVSSSTAPEPGFLK2	8928.29	7813.84	7278.62
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	EDVVLNR	EDVVLNR	2	EDVVLNR2	92164.6	128216	105417
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	EDVVTNGIGR	EDVVTNGIGR	2	EDVVTNGIGR2	56288.4	65234.4	63210.2
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	EDVYPVGTVLR	EDVYPVGTVLR	2	EDVYPVGTVLR2	4.36244e+06	4.77603e+06	5.30706e+06
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	EDVYPVGTVLR	EDVYPVGTVLR	3	EDVYPVGTVLR3	15531.7	8753.45	
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	EDWIAYISR	EDWIAYISR	2	EDWIAYISR2	36516.2	40845.6	44918.2
Q499Q1	Q499Q1	Q499Q1_RAT	Rnf126	RING-type E3 ubiquitin transferase	1	EDYALGER	EDYALGER	2	EDYALGER2	13065.9	19403.9	15861.8
P47868	P47868	SCG3_RAT	Scg3	Secretogranin-3	1	EDYDLSK	EDYDLSK	2	EDYDLSK2	3826.05		
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	EDYIEFASLDGSNR	EDYIEFASLDGSNR	2	EDYIEFASLDGSNR2	22512.4	29763.6	16470
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	EDYLAVCGLK	EDYLAVC(UniMod:4)GLK	2	EDYLAVC(UniMod:4)GLK2		11999	9963.22
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	EDYSIVNR	EDYSIVNR	2	EDYSIVNR2	11809.3	12499	20364.2
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	EDYSPLIR	EDYSPLIR	2	EDYSPLIR2	5191.56		5085.22
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	EDYVPYTGEK	EDYVPYTGEK	2	EDYVPYTGEK2	26877.4	23089.2	23631.9
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	EEAAAGSGSAGEGDGK	EEAAAGSGSAGEGDGK	2	EEAAAGSGSAGEGDGK2			107561
P62755	P62755	RS6_RAT	Rps6	Small ribosomal subunit protein eS6	1	EEAAEYAK	EEAAEYAK	2	EEAAEYAK2	30244	32626.5	33378.2
G3V9I7	G3V9I7	G3V9I7_RAT	Adck5	AarF domain containing kinase 5	1	EEAAYMQDMAR	EEAAYMQDMAR	2	EEAAYMQDMAR2	3511.6	2392.12	4476.76
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	EEACYVLSK	EEAC(UniMod:4)YVLSK	2	EEAC(UniMod:4)YVLSK2	71516.2	96518.8	87925.1
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	EEADDEAAVEEEEEEK	EEADDEAAVEEEEEEK	2	EEADDEAAVEEEEEEK2	5934.07	8452.66	1709.54
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	EEADDEAAVEEEEEEKKPK	EEADDEAAVEEEEEEKKPK	3	EEADDEAAVEEEEEEKKPK3	22739.8	41750.8	27949.2
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	EEADDEAAVEEEEEEKKPK	EEADDEAAVEEEEEEKKPK	4	EEADDEAAVEEEEEEKKPK4	129377	159279	140392
Q08850	Q08850	STX4_RAT	Stx4	Syntaxin-4	1	EEADENYNSVNTR	EEADENYNSVNTR	2	EEADENYNSVNTR2	23886.9	17530.1	19162.8
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	EEADHQVDVSDGIR	EEADHQVDVSDGIR	3	EEADHQVDVSDGIR3	11422.8	11941.4	4642.71
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	EEADNLGIQEAEYGSDPGDNIPEATGR	EEADNLGIQEAEYGSDPGDNIPEATGR	3	EEADNLGIQEAEYGSDPGDNIPEATGR3	7153.36	6678.33	7278.5
Q66H15	Q66H15	RMD3_RAT	Rmdn3	Regulator of microtubule dynamics protein 3	1	EEAEAALK	EEAEAALK	2	EEAEAALK2	27594.4	25528.5	20430.9
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	EEAEAPHAWER	EEAEAPHAWER	3	EEAEAPHAWER3	19082.1	7790.64	6645.85
Q8VHK7	Q8VHK7	HDGF_RAT	Hdgf	Hepatoma-derived growth factor	1	EEAEAQGVR	EEAEAQGVR	2	EEAEAQGVR2			6549.79
Q8VHK7	Q8VHK7	HDGF_RAT	Hdgf	Hepatoma-derived growth factor	1	EEAEAQGVRDHESL	EEAEAQGVRDHESL	3	EEAEAQGVRDHESL3	18175.8	9309.79	15122.8
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	EEAEDYLVQGGMTDGLYLLR	EEAEDYLVQGGMTDGLYLLR	3	EEAEDYLVQGGMTDGLYLLR3	4872.31	4957.96	
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	EEAERPLHFAEK	EEAERPLHFAEK	3	EEAERPLHFAEK3	17389.9	19277.8	16655.1
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	EEAERQEEELR	EEAERQEEELR	3	EEAERQEEELR3	64956.1	76936	63718.3
A0JPM9	A0JPM9	EIF3J_RAT	Eif3j	Eukaryotic translation initiation factor 3 subunit J	1	EEAEVKPEVK	EEAEVKPEVK	3	EEAEVKPEVK3	21504.7	10493.8	17699.7
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	EEAFISSCESAK	EEAFISSC(UniMod:4)ESAK	2	EEAFISSC(UniMod:4)ESAK2	5099.88	6987.02	2793.19
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	EEAGRDTELEEATEK	EEAGRDTELEEATEK	3	EEAGRDTELEEATEK3	11810.1	12261.6	15616.7
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	EEAIEHNYGGHDDDLSVR	EEAIEHNYGGHDDDLSVR	3	EEAIEHNYGGHDDDLSVR3	2088.53	5759.7	11008.1
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	EEAIEHNYGGHDDDLSVR	EEAIEHNYGGHDDDLSVR	4	EEAIEHNYGGHDDDLSVR4	11525.5	8037.79	5814.67
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	EEAIPLPCMCVTR	EEAIPLPC(UniMod:4)MC(UniMod:4)VTR	2	EEAIPLPC(UniMod:4)MC(UniMod:4)VTR2	28178.2	19004.1	16791.2
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	EEAIQVAIAELHQQHSK	EEAIQVAIAELHQQHSK	4	EEAIQVAIAELHQQHSK4	55287.3	26435.1	45626
A0A0G2K189	A0A0G2K189	A0A0G2K189_RAT	Scrn3	Secernin 3	1	EEALLGMDLVR	EEALLGMDLVR	2	EEALLGMDLVR2	8195.25	6755.25	4896.86
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	EEALNNAFK	EEALNNAFK	2	EEALNNAFK2	26232.3	29454.7	24381.4
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	EEALQADR	EEALQADR	2	EEALQADR2	23671.1	26779.8	25839.7
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	EEALTMAFR	EEALTMAFR	2	EEALTMAFR2	18540.2	31670.2	29030.9
P43138	P43138	APEX1_RAT	Apex1	DNA-(apurinic or apyrimidinic site) endonuclease	1	EEAPDILCLQETK	EEAPDILC(UniMod:4)LQETK	2	EEAPDILC(UniMod:4)LQETK2	3260.13		
A0A8I6B3N3	A0A8I6B3N3	A0A8I6B3N3_RAT	Atp6v1g1	V-type proton ATPase subunit G	1	EEAQAEIEQYR	EEAQAEIEQYR	2	EEAQAEIEQYR2	24406.4	20818.1	31011.7
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	EEAQPASPSSVQDR	EEAQPASPSSVQDR	2	EEAQPASPSSVQDR2	10595.6	9612.8	
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	EEAQQLWEAEK	EEAQQLWEAEK	2	EEAQQLWEAEK2	23194	18478.5	31610.4
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	EEASDYLELDTIK	EEASDYLELDTIK	2	EEASDYLELDTIK2	1.27783e+06	1.32462e+06	1.30915e+06
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	EEASDYLELDTIK	EEASDYLELDTIK	3	EEASDYLELDTIK3	77657.8	92750.3	84275.2
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	EEASEEKEQVLEQK	EEASEEKEQVLEQK	3	EEASEEKEQVLEQK3	5550.48	4303.71	8011.02
P51886	P51886	LUM_RAT	Lum	Lumican	1	EEAVSASLK	EEAVSASLK	1	EEAVSASLK1	120708	99708.9	95311
P51886	P51886	LUM_RAT	Lum	Lumican	1	EEAVSASLK	EEAVSASLK	2	EEAVSASLK2	27345.5	26891	24387.4
M0RA86	M0RA86	M0RA86_RAT	Ccdc9	Coiled-coil domain containing 9	1	EEAVSPAPK	EEAVSPAPK	2	EEAVSPAPK2	28668.9	28602.5	31251.6
O70352	O70352	CD82_RAT	Cd82	CD82 antigen	1	EEAWDYVQAQVK	EEAWDYVQAQVK	2	EEAWDYVQAQVK2	6849.51	2964.23	6214.09
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	EEAYELVR	EEAYELVR	2	EEAYELVR2		3668.84	2920.49
P16232	P16232	DHI1_RAT	Hsd11b1	11-beta-hydroxysteroid dehydrogenase 1	1	EECALEIIK	EEC(UniMod:4)ALEIIK	2	EEC(UniMod:4)ALEIIK2	8359.36	5178	8919.39
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	EECCPGKPLNVFR	EEC(UniMod:4)C(UniMod:4)PGKPLNVFR	3	EEC(UniMod:4)C(UniMod:4)PGKPLNVFR3	19484.7	20922.5	22878.5
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	EECELSSAELK	EEC(UniMod:4)ELSSAELK	2	EEC(UniMod:4)ELSSAELK2	5210.4	4552.09	1178.32
Q5U2R9	Q5U2R9	Q5U2R9_RAT	Scfd2	Sec1 family domain containing 2	1	EECFAVGSLSR	EEC(UniMod:4)FAVGSLSR	2	EEC(UniMod:4)FAVGSLSR2	9132.43	8012.07	
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	EECPAVR	EEC(UniMod:4)PAVR	2	EEC(UniMod:4)PAVR2		211641	
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	EECPVGR	EEC(UniMod:4)PVGR	2	EEC(UniMod:4)PVGR2	5763.38	12695.7	20807.6
P18292	P18292	THRB_RAT	F2	Prothrombin	1	EECSIPVCGQEGR	EEC(UniMod:4)SIPVC(UniMod:4)GQEGR	2	EEC(UniMod:4)SIPVC(UniMod:4)GQEGR2	47338.3	52382.4	60881.4
P18292	P18292	THRB_RAT	F2	Prothrombin	1	EECSIPVCGQEGR	EEC(UniMod:4)SIPVC(UniMod:4)GQEGR	3	EEC(UniMod:4)SIPVC(UniMod:4)GQEGR3	2.22765e+06	2.53501e+06	2.54966e+06
P18292	P18292	THRB_RAT	F2	Prothrombin	1	EECSIPVCGQEGRTTVK	EEC(UniMod:4)SIPVC(UniMod:4)GQEGRTTVK	3	EEC(UniMod:4)SIPVC(UniMod:4)GQEGRTTVK3	19423.6	34463.4	31835.9
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	EECSSALLR	EEC(UniMod:4)SSALLR	2	EEC(UniMod:4)SSALLR2	8421.85	7903.7	6728.23
Q02253	Q02253	MMSA_RAT	Aldh6a1	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial	1	EEDATLSSPAVVMPTMGR	EEDATLSSPAVVMPTMGR	2	EEDATLSSPAVVMPTMGR2	7699.95	9540.74	11946.9
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	EEDEEDATGQAK	EEDEEDATGQAK	2	EEDEEDATGQAK2			4567.2
A0A8I5ZYW3	A0A8I5ZYW3	A0A8I5ZYW3_RAT	Lsp1	Lymphocyte-specific protein 1	1	EEDEEEAAR	EEDEEEAAR	2	EEDEEEAAR2			6116.49
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	EEDFIRPSSR	EEDFIRPSSR	3	EEDFIRPSSR3	30674.2	34864.3	16779.4
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	EEDFYEDLDRFEENGTQDSR	EEDFYEDLDRFEENGTQDSR	3	EEDFYEDLDRFEENGTQDSR3	17629.5	10402.7	8717.82
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	EEDIDENLLF	EEDIDENLLF	2	EEDIDENLLF2	6049.78	9401.58	6747.61
Q9Z0W7	Q9Z0W7	CLIC4_RAT	Clic4	Chloride intracellular channel protein 4	1	EEDKEPLIELFVK	EEDKEPLIELFVK	3	EEDKEPLIELFVK3	5455.69		
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	EEDLAALR	EEDLAALR	2	EEDLAALR2	270190	225851	249757
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	EEDNTYR	EEDNTYR	2	EEDNTYR2			9661.78
Q07647	Q07647	GTR3_RAT	Slc2a3	Solute carrier family 2, facilitated glucose transporter member 3	1	EEDQATEILQR	EEDQATEILQR	2	EEDQATEILQR2	239287	243547	243018
Q07647	Q07647	GTR3_RAT	Slc2a3	Solute carrier family 2, facilitated glucose transporter member 3	1	EEDQATEILQR	EEDQATEILQR	3	EEDQATEILQR3	19489.5	31260.2	23326.9
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	EEDSELDNNGCSTQEVNITEFQLK	EEDSELDNNGC(UniMod:4)STQEVNITEFQLK	3	EEDSELDNNGC(UniMod:4)STQEVNITEFQLK3	3026.15	4963.15	
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	EEDSELDNNGCSTQEVNITEFR	EEDSELDNNGC(UniMod:4)STQEVNITEFR	3	EEDSELDNNGC(UniMod:4)STQEVNITEFR3	8843.94	8392.42	8653.1
B2RYF7	B2RYF7	WASH1_RAT	Washc1	WASH complex subunit 1	1	EEDSGSGEAHSASVQGAPK	EEDSGSGEAHSASVQGAPK	3	EEDSGSGEAHSASVQGAPK3		18979	
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	EEDSRLDNNGCSTQEVNITEFQLK	EEDSRLDNNGC(UniMod:4)STQEVNITEFQLK	3	EEDSRLDNNGC(UniMod:4)STQEVNITEFQLK3	35048	21616.8	31328.8
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	EEDSSAGTGDPPR	EEDSSAGTGDPPR	2	EEDSSAGTGDPPR2	38961.9		39101.5
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	EEDSSAGTGDPPRK	EEDSSAGTGDPPRK	3	EEDSSAGTGDPPRK3			8676.31
Q63189	Q63189	PRG2_RAT	Prg2	Bone marrow proteoglycan	1	EEDTTSLMGDSGFK	EEDTTSLMGDSGFK	2	EEDTTSLMGDSGFK2	3613.36	1953.59	4886.25
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	EEDYESDAATIVQK	EEDYESDAATIVQK	2	EEDYESDAATIVQK2	20981.6	22394.9	14566.6
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	EEDYESDAATIVQK	EEDYESDAATIVQK	3	EEDYESDAATIVQK3	4449.18	2589.63	9306.17
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	EEDYLNFILFSTGVTTWK	EEDYLNFILFSTGVTTWK	3	EEDYLNFILFSTGVTTWK3	301156	352651	159848
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	EEEACQDLLR	EEEAC(UniMod:4)QDLLR	2	EEEAC(UniMod:4)QDLLR2	6326.44	3677.29	
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	EEEAIQLDGLNASQIR	EEEAIQLDGLNASQIR	2	EEEAIQLDGLNASQIR2	86574.7	82826.5	89151.9
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	EEEAIQLDGLNASQIR	EEEAIQLDGLNASQIR	3	EEEAIQLDGLNASQIR3	17193.5	16028.9	16687.5
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	EEEATVDSK	EEEATVDSK	2	EEEATVDSK2			16894.7
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	EEECESYTVR	EEEC(UniMod:4)ESYTVR	2	EEEC(UniMod:4)ESYTVR2	4061.41	7188.08	10504.7
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	EEECVMK	EEEC(UniMod:4)VMK	2	EEEC(UniMod:4)VMK2	7500.97	3526.63	7539.9
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	EEEDVNVR	EEEDVNVR	2	EEEDVNVR2	124785	157964	135626
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	EEEEAEDKEDEDDR	EEEEAEDKEDEDDR	3	EEEEAEDKEDEDDR3			1896.08
D3ZWA1	D3ZWA1	D3ZWA1_RAT	Mindy2	Ubiquitin carboxyl-terminal hydrolase	1	EEEEDPAQVLAASK	EEEEDPAQVLAASK	2	EEEEDPAQVLAASK2	11166.3	15215.3	10914.2
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	EEEEEEEEYDEGSNLK	EEEEEEEEYDEGSNLK	2	EEEEEEEEYDEGSNLK2	3555.61	1946.63	1640.44
P10354	P10354;M0R9A9	CMGA_RAT	Chga	Chromogranin-A	0	EEEEEEKEEEEEEK	EEEEEEKEEEEEEK	3	EEEEEEKEEEEEEK3			2583.62
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	EEEEEEKEEEEEEKEEK	EEEEEEKEEEEEEKEEK	3	EEEEEEKEEEEEEKEEK3	57156.9	50220.5	47577.5
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	EEEEEEKEEEEEEKEEK	EEEEEEKEEEEEEKEEK	4	EEEEEEKEEEEEEKEEK4	105172	94930.6	106715
Q5M9I5	Q5M9I5	QCR6_RAT	Uqcrh	Cytochrome b-c1 complex subunit 6, mitochondrial	1	EEEEEELVDPLTTVR	EEEEEELVDPLTTVR	2	EEEEEELVDPLTTVR2	85307.6	69133.9	70443.9
Q5M9I5	Q5M9I5	QCR6_RAT	Uqcrh	Cytochrome b-c1 complex subunit 6, mitochondrial	1	EEEEEELVDPLTTVR	EEEEEELVDPLTTVR	3	EEEEEELVDPLTTVR3	58014.3	54735.1	66909.1
A0A8I6A282	A0A8I6A282	A0A8I6A282_RAT	Antxr2	Anthrax toxin receptor	1	EEEEEEPLPNK	EEEEEEPLPNK	2	EEEEEEPLPNK2	24025.1	22281.5	26899.2
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	EEEELACDWSDSNPNISAK	EEEELAC(UniMod:4)DWSDSNPNISAK	3	EEEELAC(UniMod:4)DWSDSNPNISAK3	6856.13	5910.06	6364.67
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	EEEELITQGELNK	EEEELITQGELNK	2	EEEELITQGELNK2	3041.52	2667.54	5886.68
A0A8I5ZU29	A0A8I5ZU29	A0A8I5ZU29_RAT	LOC120097335	High mobility group nucleosome-binding domain-containing protein 5-like	1	EEEEQEAAAEGNDENK	EEEEQEAAAEGNDENK	2	EEEEQEAAAEGNDENK2	2392.71	2012.17	2222.11
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	EEEFDFDVAEDLGPLQFVK	EEEFDFDVAEDLGPLQFVK	3	EEEFDFDVAEDLGPLQFVK3	33786.6	31385.6	37909.6
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	EEEFFTYR	EEEFFTYR	2	EEEFFTYR2	5.63196e+06	5.68697e+06	6.06366e+06
D4AEK9	D4AEK9	D4AEK9_RAT	Ccdc6	Coiled-coil domain containing 6	1	EEEFLTNELSR	EEEFLTNELSR	2	EEEFLTNELSR2	54460.1	43365	49015.1
Q32Q06	Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	1	EEEGMLSPILAHGGVR	EEEGMLSPILAHGGVR	2	EEEGMLSPILAHGGVR2	3425.26	1145.2	4292.17
Q32Q06	Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	1	EEEGMLSPILAHGGVR	EEEGMLSPILAHGGVR	3	EEEGMLSPILAHGGVR3	47482.4	42178.1	35679.1
Q9JLH7	Q9JLH7	CK5P3_RAT	Cdk5rap3	CDK5 regulatory subunit-associated protein 3	1	EEEGQAGAAEMR	EEEGQAGAAEMR	2	EEEGQAGAAEMR2	22353.7	9177.35	11656.2
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	EEEHDRFLEEIMTK	EEEHDRFLEEIMTK	3	EEEHDRFLEEIMTK3	3848.14	4743.57	
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	EEEHDRFLEEIMTK	EEEHDRFLEEIMTK	4	EEEHDRFLEEIMTK4	8024.68		11757.1
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	EEEITLYPDK	EEEITLYPDK	2	EEEITLYPDK2	7638.02	11804.8	9438.63
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	EEELNAIR	EEELNAIR	2	EEELNAIR2	23330.3	29664.3	25730.1
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	EEELQAALAR	EEELQAALAR	2	EEELQAALAR2	115621	84348.7	157532
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	EEELQNVR	EEELQNVR	2	EEELQNVR2	37746	32338.4	35841.7
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	EEELQNVRDQLQQAQEER	EEELQNVRDQLQQAQEER	3	EEELQNVRDQLQQAQEER3	5005.83	2204.34	
D3ZTP3	D3ZTP3	D3ZTP3_RAT	Tmem59	Transmembrane protein 59	1	EEELYACQR	EEELYAC(UniMod:4)QR	2	EEELYAC(UniMod:4)QR2	35222.7	34679.7	32746.4
A0A8I6A822	A0A8I6A822	A0A8I6A822_RAT	Tm9sf3	Transmembrane 9 superfamily member	1	EEEMDDMDR	EEEMDDMDR	2	EEEMDDMDR2	6129.08	2960.81	4352.25
A0A8I6A822	A0A8I6A822	A0A8I6A822_RAT	Tm9sf3	Transmembrane 9 superfamily member	1	EEEMDDMDRDLGDEYGWK	EEEMDDMDRDLGDEYGWK	3	EEEMDDMDRDLGDEYGWK3	134847	119715	127827
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	EEEPEAMLPGAQPTLISAISK	EEEPEAMLPGAQPTLISAISK	3	EEEPEAMLPGAQPTLISAISK3	18090.6	10794.1	11194.3
P15384	P15384	KCNA3_RAT	Kcna3	Potassium voltage-gated channel subfamily A member 3	1	EEERPLPR	EEERPLPR	2	EEERPLPR2	11166.6	9031.28	6178.54
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	EEESLENIPSVK	EEESLENIPSVK	2	EEESLENIPSVK2	10020.3	7365.34	9566.45
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	EEESVGMPEPLQK	EEESVGMPEPLQK	2	EEESVGMPEPLQK2	8952.51	10649.6	11086.8
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	EEEVEFLYNEHTVR	EEEVEFLYNEHTVR	3	EEEVEFLYNEHTVR3	8720.62	6955.98	9688.86
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	EEEVIQDIQEEK	EEEVIQDIQEEK	2	EEEVIQDIQEEK2	5252.6	4629.86	4576.2
Q9WVK3	Q9WVK3	PECR_RAT	Pecr	Peroxisomal trans-2-enoyl-CoA reductase	1	EEEVNNLVK	EEEVNNLVK	2	EEEVNNLVK2	3463.31		6819.97
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	EEEVQTVEDGVFDIHL	EEEVQTVEDGVFDIHL	3	EEEVQTVEDGVFDIHL3		5188.4	4257.52
Q5FWU0	Q5FWU0	Q5FWU0_RAT	Wasf2	Wiskott-Aldrich syndrome protein family member	1	EEEVSLQGINTR	EEEVSLQGINTR	2	EEEVSLQGINTR2	73151.2	63015	67090.1
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	EEEVSYLVGQLGEK	EEEVSYLVGQLGEK	2	EEEVSYLVGQLGEK2	4405.34	9342.48	
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	EEEVSYLVGQLGEK	EEEVSYLVGQLGEK	3	EEEVSYLVGQLGEK3			8180.5
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	EEFALAAQK	EEFALAAQK	2	EEFALAAQK2	102024	150823	146192
Q6MG61	Q6MG61	CLIC1_RAT	Clic1	Chloride intracellular channel protein 1	1	EEFASTCPDDEEIELAYEQVAR	EEFASTC(UniMod:4)PDDEEIELAYEQVAR	3	EEFASTC(UniMod:4)PDDEEIELAYEQVAR3	58142.7	43579.2	54517.1
P22273	P22273	IL6RA_RAT	Il6r	Interleukin-6 receptor subunit alpha	1	EEFDIGQWSK	EEFDIGQWSK	2	EEFDIGQWSK2	19578.3	17630.9	13871
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	EEFEHQQK	EEFEHQQK	2	EEFEHQQK2			48631.7
Q5XIF5	Q5XIF5	DEGS1_RAT	Degs1	Sphingolipid delta(4)-desaturase DES1	1	EEFEWVYTDQPHAAR	EEFEWVYTDQPHAAR	3	EEFEWVYTDQPHAAR3	28186.4	18612.5	32577.4
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	EEFEYIAFR	EEFEYIAFR	2	EEFEYIAFR2	135375	141139	144758
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	EEFFIGSK	EEFFIGSK	2	EEFFIGSK2	253020	156953	151178
P80386	P80386	AAKB1_RAT	Prkab1	5'-AMP-activated protein kinase subunit beta-1	1	EEFLAWQHDLEVNEK	EEFLAWQHDLEVNEK	3	EEFLAWQHDLEVNEK3	17748.4	22371.7	18439.3
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	EEFPTLQAAGDQDK	EEFPTLQAAGDQDK	2	EEFPTLQAAGDQDK2	8754.07	9181.57	4592.02
A0A0G2K618	A0A0G2K618	A0A0G2K618_RAT	Large1	LARGE xylosyl- and glucuronyltransferase 1	1	EEFQQDMSR	EEFQQDMSR	2	EEFQQDMSR2	2026.29	2609.84	
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	EEFRPTIYSNVIK	EEFRPTIYSNVIK	3	EEFRPTIYSNVIK3	59247.6	55081.1	58268.1
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	EEFTAFLHPEEFEHMK	EEFTAFLHPEEFEHMK	3	EEFTAFLHPEEFEHMK3	12050.3	20422.5	9915.6
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	EEFTAFLHPEEFEHMK	EEFTAFLHPEEFEHMK	4	EEFTAFLHPEEFEHMK4	23990.8	27258.7	19374.3
O35783	O35783	CALU_RAT	Calu	Calumenin	1	EEFTAFLHPEEYDYMK	EEFTAFLHPEEYDYMK	3	EEFTAFLHPEEYDYMK3	1.16197e+06	1.38664e+06	1.2588e+06
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	EEFTEALR	EEFTEALR	2	EEFTEALR2	54604	48893.8	62036.8
P51792	P51792	CLCN3_RAT	Clcn3	H(+)/Cl(-) exchange transporter 3	1	EEFTHTTLAADVMRPR	EEFTHTTLAADVMRPR	3	EEFTHTTLAADVMRPR3	10573.9	16989.8	9382.82
P51792	P51792	CLCN3_RAT	Clcn3	H(+)/Cl(-) exchange transporter 3	1	EEFTHTTLAADVMRPR	EEFTHTTLAADVMRPR	4	EEFTHTTLAADVMRPR4	48737.8	43064.6	54065.7
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	EEFTSGGPLGQK	EEFTSGGPLGQK	2	EEFTSGGPLGQK2	84929.6	65049.5	59707.9
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	EEFVEDEAALK	EEFVEDEAALK	2	EEFVEDEAALK2	6941.76	8833.57	14191
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	EEFVLTPIEVAIEDMK	EEFVLTPIEVAIEDMK	2	EEFVLTPIEVAIEDMK2	14400.3	15427.6	6432.92
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	EEFVLTPIEVAIEDMKK	EEFVLTPIEVAIEDMKK	3	EEFVLTPIEVAIEDMKK3	9557.34	10704	14478.5
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	EEFWLGLDNLSK	EEFWLGLDNLSK	2	EEFWLGLDNLSK2	276669	312358	250468
P15651	P15651	ACADS_RAT	Acads	Short-chain specific acyl-CoA dehydrogenase, mitochondrial	1	EEGDSWVLNGTK	EEGDSWVLNGTK	2	EEGDSWVLNGTK2	4644.17	5136.54	4084.78
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	EEGDYVLVLK	EEGDYVLVLK	2	EEGDYVLVLK2	21423.7	11103.3	21832.6
P05712	Q3B7V5;P05712	RAB2A_RAT	Rab2a	Ras-related protein Rab-2A	0	EEGEAFAR	EEGEAFAR	2	EEGEAFAR2	25412.5	19206.4	19439.5
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	EEGEKPDFCNGHSPAVTVTFVCPSER	EEGEKPDFC(UniMod:4)NGHSPAVTVTFVC(UniMod:4)PSER	4	EEGEKPDFC(UniMod:4)NGHSPAVTVTFVC(UniMod:4)PSER4	4341	5303.56	4559.88
Q07205	Q07205;A0A8I6AVQ3	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	EEGIIDSSDK	EEGIIDSSDK	2	EEGIIDSSDK2	8846.84	11397.7	7541.89
Q07205	Q07205;A0A8I6AVQ3	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	EEGIIDSSDKDIVAEAER	EEGIIDSSDKDIVAEAER	3	EEGIIDSSDKDIVAEAER3	7175	28983.8	16421.6
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	EEGLAEETLR	EEGLAEETLR	2	EEGLAEETLR2	34490.8	44716.1	39536.6
P16036	P16036	S25A3_RAT	Slc25a3	Solute carrier family 25 member 3	1	EEGLNAFYK	EEGLNAFYK	2	EEGLNAFYK2	559229	586825	604441
A0A8J8YNR6	A0A8J8YNR6	A0A8J8YNR6_RAT	Fxr2	FMR1 autosomal homolog 2	1	EEGMVPFIFVGTR	EEGMVPFIFVGTR	2	EEGMVPFIFVGTR2	13386	21519.7	7749.3
D3ZF26	D3ZF26	D3ZF26_RAT	Tnks1bp1	Tankyrase 1 binding protein 1	1	EEGNWQDGAPSQEITR	EEGNWQDGAPSQEITR	2	EEGNWQDGAPSQEITR2			6749.14
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	EEGPGPTR	EEGPGPTR	2	EEGPGPTR2			15618.9
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	EEGPSAFWK	EEGPSAFWK	2	EEGPSAFWK2	22521.7	14970.5	19108.5
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	EEGPVTEQVK	EEGPVTEQVK	2	EEGPVTEQVK2	1667.18	1669.3	3335.06
F1LQ27	F1LQ27	F1LQ27_RAT	Fam98c	Family with sequence similarity 98, member C	1	EEGTAVLGAGHGPDAEEEFLR	EEGTAVLGAGHGPDAEEEFLR	3	EEGTAVLGAGHGPDAEEEFLR3	1855.58		5815.71
Q6P6R2	Q6P6R2;A0A8I6A931	DLDH_RAT	Dld	Dihydrolipoyl dehydrogenase, mitochondrial	0	EEGVEFK	EEGVEFK	2	EEGVEFK2	129337	103462	109782
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	EEGVGGSGGGPALLPAEGAVFLTTYR	EEGVGGSGGGPALLPAEGAVFLTTYR	3	EEGVGGSGGGPALLPAEGAVFLTTYR3	2981.99	2719.37	
P97700	P97700	M2OM_RAT	Slc25a11	Mitochondrial 2-oxoglutarate/malate carrier protein	1	EEGVPTLWR	EEGVPTLWR	2	EEGVPTLWR2	165525	183503	142456
Q5XHY7	Q5XHY7	STAM2_RAT	Stam2	Signal transducing adapter molecule 2	1	EEGVTFPSAGSQTVSAAAK	EEGVTFPSAGSQTVSAAAK	2	EEGVTFPSAGSQTVSAAAK2	11237.5	10311.9	8718.03
P97521	P97521	MCAT_RAT	Slc25a20	Mitochondrial carnitine/acylcarnitine carrier protein	1	EEGVTSLYK	EEGVTSLYK	2	EEGVTSLYK2	61493.2	52357.7	60556.9
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	EEHCYLLHSFEEFEALAR	EEHC(UniMod:4)YLLHSFEEFEALAR	4	EEHC(UniMod:4)YLLHSFEEFEALAR4	44522	49928.3	38592.9
P27615	P27615	SCRB2_RAT	Scarb2	Lysosome membrane protein 2	1	EEHESFVDINPLTGIILR	EEHESFVDINPLTGIILR	3	EEHESFVDINPLTGIILR3	3612.1	1886.04	
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	EEHLCTQR	EEHLC(UniMod:4)TQR	2	EEHLC(UniMod:4)TQR2	80449.7		18470.2
Q66H86	Q66H86	OLFL1_RAT	Olfml1	Olfactomedin-like protein 1	1	EEHLPNLFFPR	EEHLPNLFFPR	2	EEHLPNLFFPR2	7067.73	8672.52	4623.74
Q66H86	Q66H86	OLFL1_RAT	Olfml1	Olfactomedin-like protein 1	1	EEHLPNLFFPR	EEHLPNLFFPR	3	EEHLPNLFFPR3	71293.7	53987.7	60827.5
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	EEHLTTNGYR	EEHLTTNGYR	2	EEHLTTNGYR2	18164.3	13735.9	9581.32
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	EEHLTTNGYR	EEHLTTNGYR	3	EEHLTTNGYR3	116237	101554	114593
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	EEHPTWDDEQLFQTTR	EEHPTWDDEQLFQTTR	3	EEHPTWDDEQLFQTTR3	26798.5	23775.2	26841.1
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	EEHSFTVMEFVLPR	EEHSFTVMEFVLPR	2	EEHSFTVMEFVLPR2	90158.1	8.52972e+06	7.69405e+06
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	EEHSFTVMEFVLPR	EEHSFTVMEFVLPR	3	EEHSFTVMEFVLPR3	5.04642e+07	4.00543e+07	4.06472e+07
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	EEHSFTVMEFVLPR	EEHSFTVMEFVLPR	4	EEHSFTVMEFVLPR4	849804	696694	682642
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	EEHSFTVMEFVLPRFGVDVK	EEHSFTVMEFVLPRFGVDVK	4	EEHSFTVMEFVLPRFGVDVK4	7139.7	1383.82	6257.97
P97694	P97694	CYH1_RAT	Cyth1	Cytohesin-1	1	EEIAEVANEIESLGSTEER	EEIAEVANEIESLGSTEER	3	EEIAEVANEIESLGSTEER3	2558.52	2123.22	1664.06
P97694	P97694	CYH1_RAT	Cyth1	Cytohesin-1	1	EEIAEVANEIESLGSTEERK	EEIAEVANEIESLGSTEERK	3	EEIAEVANEIESLGSTEERK3	23557.8	15464.7	24972.1
A0A8I5ZV26	A0A8I5ZV26	A0A8I5ZV26_RAT	Stom	Stomatin	1	EEIAHHMQSTLDDATDDWGIK	EEIAHHMQSTLDDATDDWGIK	3	EEIAHHMQSTLDDATDDWGIK3	12665.1	13880.3	9469.6
A0A8I5ZV26	A0A8I5ZV26	A0A8I5ZV26_RAT	Stom	Stomatin	1	EEIAHHMQSTLDDATDDWGIK	EEIAHHMQSTLDDATDDWGIK	4	EEIAHHMQSTLDDATDDWGIK4	8866.16	10924.7	24023.3
Q6IRK9	Q6IRK9	CBPQ_RAT	Cpq	Carboxypeptidase Q	1	EEIANYEDVAK	EEIANYEDVAK	2	EEIANYEDVAK2	52681.3	29856.3	39358.7
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	EEIAPINLK	EEIAPINLK	2	EEIAPINLK2	337965	326647	325413
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	EEIDAHK	EEIDAHK	2	EEIDAHK2			7161.83
G3V985	G3V985	G3V985_RAT	Sco1	Synthesis of cytochrome C oxidase 1	1	EEIDGVAR	EEIDGVAR	2	EEIDGVAR2	18062.3	15766	16736.4
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	EEIDILSDACSK	EEIDILSDAC(UniMod:4)SK	2	EEIDILSDAC(UniMod:4)SK2	14926.1	15238.2	16121.4
A0A096MJY7	A0A096MJY7	A0A096MJY7_RAT	Lsm14a	LSM14A mRNA processing body assembly factor	1	EEIDREFHNK	EEIDREFHNK	3	EEIDREFHNK3	5544.93	3439.04	7425.28
Q63635	Q63635	STX6_RAT	Stx6	Syntaxin-6	1	EEIDWTTNELR	EEIDWTTNELR	2	EEIDWTTNELR2	8591.66	8930.92	7611.98
Q9WTV5	Q9WTV5	PSMD9_RAT	Psmd9	26S proteasome non-ATPase regulatory subunit 9	1	EEIEAQIK	EEIEAQIK	2	EEIEAQIK2	29184.6	22715	18377.8
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	EEIFGPVMQILK	EEIFGPVMQILK	2	EEIFGPVMQILK2	145926	131395	143199
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	EEIIEVFVQELR	EEIIEVFVQELR	2	EEIIEVFVQELR2	93126.4	57516.4	78581.8
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	EEIIEVFVQELR	EEIIEVFVQELR	3	EEIIEVFVQELR3	25699.9	24796	24923.6
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	EEIIEVFVQELRK	EEIIEVFVQELRK	3	EEIIEVFVQELRK3	15821	18027.3	20874.1
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	EEIILTPIEVAIEDMQK	EEIILTPIEVAIEDMQK	3	EEIILTPIEVAIEDMQK3			5689.53
A0A8I6A6G8	A0A8I6A6G8	A0A8I6A6G8_RAT	Hm13	Histocompatibility minor 13	1	EEIINYEFDTK	EEIINYEFDTK	2	EEIINYEFDTK2	19285.5	7796.69	10620.8
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	EEIIPVAPDYDK	EEIIPVAPDYDK	2	EEIIPVAPDYDK2	229193	202392	210763
Q76MX4	Q76MX4	MAFG_RAT	Mafg	Transcription factor MafG	1	EEIIQLK	EEIIQLK	2	EEIIQLK2	2495.76	5328.61	6682.54
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	EEILAALEK	EEILAALEK	2	EEILAALEK2	43568.4	42405.4	26891.8
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	EEILAQAK	EEILAQAK	1	EEILAQAK1	123891	152510	137724
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	EEILAQAK	EEILAQAK	2	EEILAQAK2	8.96105e+06	9.8717e+06	9.95633e+06
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	EEILDNWNMFVGSQATNYGEDLTK	EEILDNWNMFVGSQATNYGEDLTK	3	EEILDNWNMFVGSQATNYGEDLTK3			6258.04
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	EEILLANK	EEILLANK	2	EEILLANK2	6505.98		6334.3
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	EEILLIK	EEILLIK	2	EEILLIK2	6270.72	4312.92	5935.82
Q08603	Q08603	PGTB2_RAT	Rabggtb	Geranylgeranyl transferase type-2 subunit beta	1	EEILVFIK	EEILVFIK	2	EEILVFIK2	7133.42	6240.59	4319.73
P55213	P55213	CASP3_RAT	Casp3	Caspase-3	1	EEIMELMDSVSK	EEIMELMDSVSK	2	EEIMELMDSVSK2	12424.6	16398.5	19495.3
P11505	P11505	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	1	EEIPEEELAEDVEEIDHAER	EEIPEEELAEDVEEIDHAER	3	EEIPEEELAEDVEEIDHAER3	8868.5	11116	14057.2
O08679	O08679	MARK2_RAT	Mark2	Serine/threonine-protein kinase MARK2	1	EEIQDSLVGQR	EEIQDSLVGQR	2	EEIQDSLVGQR2	8668.66	6115.76	6327.02
D4A5G8	D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	EEIQEVR	EEIQEVR	2	EEIQEVR2	31530.3	32365.2	36201.8
G3V7P2	G3V7P2	G3V7P2_RAT	Fgl2	Fibrinogen-like 2	1	EEIQGLQGR	EEIQGLQGR	2	EEIQGLQGR2	5.37797e+06	5.76537e+06	5.69705e+06
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	EEIQKELEDLR	EEIQKELEDLR	3	EEIQKELEDLR3	32952.2	45089.6	34527.2
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	EEIQLDIQAR	EEIQLDIQAR	2	EEIQLDIQAR2	906755	1.11238e+06	651301
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	EEIQLDIQAR	EEIQLDIQAR	3	EEIQLDIQAR3	39638.7	42186.5	26098
P08649	P08649	CO4_RAT	C4	Complement C4	1	EEIQLDVQAR	EEIQLDVQAR	2	EEIQLDVQAR2	1.14799e+07	1.26411e+07	1.02585e+07
P08649	P08649	CO4_RAT	C4	Complement C4	1	EEIQLDVQAR	EEIQLDVQAR	3	EEIQLDVQAR3	384521	385058	318711
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	EEIQSSISGVTAAYNR	EEIQSSISGVTAAYNR	2	EEIQSSISGVTAAYNR2	20926.2	17404.7	17968.9
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	EEIQSSISGVTAAYNR	EEIQSSISGVTAAYNR	3	EEIQSSISGVTAAYNR3			2591.08
Q5M936	Q5M936	TOR3A_RAT	Tor3a	Torsin-3A	1	EEITLQHLEMPLQAEIIK	EEITLQHLEMPLQAEIIK	3	EEITLQHLEMPLQAEIIK3	17472.4	9937.02	18283.9
P97586	P97586	CGRE1_RAT	Cgref1	Cell growth regulator with EF hand domain protein 1	1	EEITSQVEAK	EEITSQVEAK	2	EEITSQVEAK2	1.34372e+06	1.67399e+06	1.34445e+06
F1M9Q3	F1M9Q3	F1M9Q3_RAT	Ltn1	E3 ubiquitin-protein ligase listerin	1	EEITTVLQDHLLK	EEITTVLQDHLLK	3	EEITTVLQDHLLK3	10834	7285.03	9920.22
Q4V7C6	Q4V7C6	GUAA_RAT	Gmps	GMP synthase [glutamine-hydrolyzing]	1	EEIVLLTHGDSVDK	EEIVLLTHGDSVDK	3	EEIVLLTHGDSVDK3	5117.48	9663.3	7064.93
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	EEIVYNLDPLNNLGR	EEIVYNLDPLNNLGR	2	EEIVYNLDPLNNLGR2	2.02281e+07	1.93351e+07	1.7431e+07
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	EEIVYNLDPLNNLGR	EEIVYNLDPLNNLGR	3	EEIVYNLDPLNNLGR3	4.74407e+06	6824.25	7181.29
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	EEIYNQLLDK	EEIYNQLLDK	2	EEIYNQLLDK2	24279.2	25023.8	26514.5
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	EEKENLQGLVTR	EEKENLQGLVTR	2	EEKENLQGLVTR2	2854.26	5472.56	1550.81
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	EEKENLQGLVTR	EEKENLQGLVTR	3	EEKENLQGLVTR3	62431.3	64341.6	63424.8
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	EEKEQHGLQLQGEVSQLHSK	EEKEQHGLQLQGEVSQLHSK	4	EEKEQHGLQLQGEVSQLHSK4	11168.2	14175.3	8391.9
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	EEKPPTLTGQHPPEPR	EEKPPTLTGQHPPEPR	2	EEKPPTLTGQHPPEPR2	4331.97	3685.63	
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	EEKPPTLTGQHPPEPR	EEKPPTLTGQHPPEPR	3	EEKPPTLTGQHPPEPR3	205938	148385	84012
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	EEKPPTLTGQHPPEPR	EEKPPTLTGQHPPEPR	4	EEKPPTLTGQHPPEPR4	462661	314149	270655
A0A8I5Y868	A0A8I5Y868	A0A8I5Y868_RAT	Klc2	Kinesin light chain	1	EELAGTQQK	EELAGTQQK	2	EELAGTQQK2	8809.3	8406.06	9970.52
Q6MGC4	Q6MGC4;A0A8I6GI92	Q6MGC4_RAT	Pfdn6	Prefoldin subunit 6	0	EELALLDGSNVVFK	EELALLDGSNVVFK	2	EELALLDGSNVVFK2	44826.4	50418.6	53326.1
Q5XIA5	Q5XIA5	Q5XIA5_RAT	Coasy	Coenzyme A synthase	1	EELALYQIQLLK	EELALYQIQLLK	2	EELALYQIQLLK2	2278.36		2082.08
A0A8I5Y4X4	A0A8I5Y4X4	A0A8I5Y4X4_RAT	Nub1	Negative regulator of ubiquitin-like proteins 1	1	EELAQIR	EELAQIR	2	EELAQIR2	23049.7	23229.1	20297.1
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	EELATSFTSLLAYGLSLIR	EELATSFTSLLAYGLSLIR	3	EELATSFTSLLAYGLSLIR3	4158.72		
Q6IFU8	Q6IFV1;Q63279;Q6IFU7;Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	0	EELAYLK	EELAYLK	2	EELAYLK2	28050.1	20840.1	18659.2
D4A3S0	D4A3S0	D4A3S0_RAT	Trappc6a	Trafficking protein particle complex subunit 6A	1	EELDALK	EELDALK	2	EELDALK2	14190.6	14729	15344.7
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	EELDAWK	EELDAWK	2	EELDAWK2	10225.6	6675.33	6520.95
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	EELDDEK	EELDDEK	2	EELDDEK2	6670.97	9118.15	
Q769K2	Q769K2	NAPEP_RAT	Napepld	N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D	1	EELDKELPVLKPYFISDPEEAGVR	EELDKELPVLKPYFISDPEEAGVR	3	EELDKELPVLKPYFISDPEEAGVR3	3593.36	3504.95	
Q769K2	Q769K2	NAPEP_RAT	Napepld	N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D	1	EELDKELPVLKPYFISDPEEAGVR	EELDKELPVLKPYFISDPEEAGVR	4	EELDKELPVLKPYFISDPEEAGVR4	13617.3	12992.8	13629.7
Q5HZY2	Q5HZY2	SAR1B_RAT	Sar1b	GTP-binding protein SAR1b	1	EELDSLMTDETIANVPILILGNK	EELDSLMTDETIANVPILILGNK	3	EELDSLMTDETIANVPILILGNK3	10462.8	15703.2	14739.8
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	EELDTLK	EELDTLK	2	EELDTLK2	21610.2	12333.7	21030
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	EELDTLKEEK	EELDTLKEEK	2	EELDTLKEEK2	6650.05	1722.99	2259.95
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	EELDTLKEEK	EELDTLKEEK	3	EELDTLKEEK3	88945.4	83805.8	83609.2
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	EELDTLKEEKENLQGLVTR	EELDTLKEEKENLQGLVTR	3	EELDTLKEEKENLQGLVTR3	11252.8	14660.6	11939.7
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	EELDTLKEEKENLQGLVTR	EELDTLKEEKENLQGLVTR	4	EELDTLKEEKENLQGLVTR4	56007.7	55444.5	76509.6
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	EELEEAR	EELEEAR	2	EELEEAR2	110309	121397	106371
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	EELEELFAEAPPLGAEAGDTDMSIEK	EELEELFAEAPPLGAEAGDTDMSIEK	3	EELEELFAEAPPLGAEAGDTDMSIEK3	18032.1	27323.2	21683.1
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	EELEELQEAFNK	EELEELQEAFNK	2	EELEELQEAFNK2	6736.96	7828.51	3802.35
P34064	P34064	PSA5_RAT	Psma5	Proteasome subunit alpha type-5	1	EELEEVIK	EELEEVIK	2	EELEEVIK2	278630	250526	277598
P34064	P34064	PSA5_RAT	Psma5	Proteasome subunit alpha type-5	1	EELEEVIKDI	EELEEVIKDI	2	EELEEVIKDI2	1.73357e+06	1.71554e+06	1.85449e+06
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	EELELLK	EELELLK	2	EELELLK2	33748.1	28606	29361
Q7TP42	Q7TP42	Q7TP42_RAT	Sec62	Translocation protein SEC62	1	EELEQQTDGDCDEEDDDKDGEMPK	EELEQQTDGDC(UniMod:4)DEEDDDKDGEMPK	3	EELEQQTDGDC(UniMod:4)DEEDDDKDGEMPK3	31351.1	32382.9	27018.2
Q68FP9	Q68FP9	COG6_RAT	Cog6	Conserved oligomeric Golgi complex subunit 6	1	EELESINEDVQAMSSCCQDMTSR	EELESINEDVQAMSSC(UniMod:4)C(UniMod:4)QDMTSR	3	EELESINEDVQAMSSC(UniMod:4)C(UniMod:4)QDMTSR3	4132.26	4022.28	
P51635	P51635	AK1A1_RAT	Akr1a1	Aldo-keto reductase family 1 member A1	1	EELFVTSK	EELFVTSK	2	EELFVTSK2	25149	18535.6	22978.6
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	EELGAVR	EELGAVR	2	EELGAVR2	42316.7	48519.8	45223.6
F1M1H0	F1M1H0	F1M1H0_RAT	Dera	deoxyribose-phosphate aldolase	1	EELGDEWLTPDLFR	EELGDEWLTPDLFR	2	EELGDEWLTPDLFR2	11120.8	10639.1	
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	EELHAQCAQSFQDKDK	EELHAQC(UniMod:4)AQSFQDKDK	3	EELHAQC(UniMod:4)AQSFQDKDK3	7900.94	3606.45	7993.86
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	EELHAQCAQSFQDKDK	EELHAQC(UniMod:4)AQSFQDKDK	4	EELHAQC(UniMod:4)AQSFQDKDK4	5177.87	9089.96	
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	EELIGALQTQLSQTQAEQAAQK	EELIGALQTQLSQTQAEQAAQK	3	EELIGALQTQLSQTQAEQAAQK3	3468.41	6060.94	5681.58
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	EELINFK	EELINFK	2	EELINFK2	136493	128249	126101
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	EELIPQLR	EELIPQLR	2	EELIPQLR2	88835	91364	103583
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EELITNWEQIR	EELITNWEQIR	2	EELITNWEQIR2	22516.1	13113.2	18686.6
Q9WTN5	Q9WTN5	TPC1_RAT	Tpcn1	Two pore calcium channel protein 1	1	EELLAILELHR	EELLAILELHR	3	EELLAILELHR3	8794.98	13411.4	10937.3
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	EELLEYEEK	EELLEYEEK	2	EELLEYEEK2	158341	162804	145004
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	EELLEYEEKK	EELLEYEEKK	2	EELLEYEEKK2	17134.2	15209.2	13952.6
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	EELLEYEEKK	EELLEYEEKK	3	EELLEYEEKK3	62412.4	54738.8	59481.3
O08770	O08770	GPV_RAT	Gp5	Platelet glycoprotein V	1	EELLFEAMGK	EELLFEAMGK	2	EELLFEAMGK2	524362	415774	422488
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	EELLNAMVAK	EELLNAMVAK	2	EELLNAMVAK2	14670.6	8610.17	
D3ZER6	D3ZER6	D3ZER6_RAT	Tnpo2	Transportin 2	1	EELLPHLLPLLK	EELLPHLLPLLK	3	EELLPHLLPLLK3	11903.9	6351.19	4994.81
Q3B7U4	Q3B7U4	CTU2_RAT	Ctu2	Cytoplasmic tRNA 2-thiolation protein 2	1	EELLQTLR	EELLQTLR	2	EELLQTLR2	12019.3	18716.7	14198.7
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	EELLTNKHPPGHTATCK	EELLTNKHPPGHTATC(UniMod:4)K	4	EELLTNKHPPGHTATC(UniMod:4)K4		9101.53	3655
B2RYM5	B2RYM5	BRCC3_RAT	Brcc3	Lys-63-specific deubiquitinase BRCC36	1	EELMAELR	EELMAELR	2	EELMAELR2	24636.9	13848.2	19253.4
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	EELMAPTLLPELHLLK	EELMAPTLLPELHLLK	3	EELMAPTLLPELHLLK3	4812.44	10275.2	8409.23
A0A0G2JSI4	A0A0G2JSI4	A0A0G2JSI4_RAT	Adgre5	Adhesion G protein-coupled receptor E5	1	EELMCAYWK	EELMC(UniMod:4)AYWK	2	EELMC(UniMod:4)AYWK2	55830.6	60484.2	53778.1
Q7M0E3	D4A315;Q7M0E3	DEST_RAT	Dstn	Destrin	0	EELMFFLWAPEQAPLK	EELMFFLWAPEQAPLK	2	EELMFFLWAPEQAPLK2	7551.5		
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	EELNALK	EELNALK	2	EELNALK2	164501	151098	143567
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	EELNMSK	EELNMSK	2	EELNMSK2	3827.5		4170.2
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	EELPPISPEHSIEEVHQAVLNLHSIAK	EELPPISPEHSIEEVHQAVLNLHSIAK	4	EELPPISPEHSIEEVHQAVLNLHSIAK4	3197.47	5572.88	9223.72
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	EELQLLQEQGSYVGEVVR	EELQLLQEQGSYVGEVVR	3	EELQLLQEQGSYVGEVVR3	14211.9	9120.35	15118
Q5XIK7	Q5XIK7	KATL1_RAT	Katnal1	Katanin p60 ATPase-containing subunit A-like 1	1	EELQMPVTR	EELQMPVTR	2	EELQMPVTR2	6351.85	10780.2	7098.1
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	EELQPYK	EELQPYK	2	EELQPYK2	14195.1	10958.1	13817.9
A2VD12	A2VD12	PBIP1_RAT	Pbxip1	Pre-B-cell leukemia transcription factor-interacting protein 1	1	EELQSLLHQPK	EELQSLLHQPK	3	EELQSLLHQPK3	6060.29	7055.98	
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	EELQSQVELLNSFEK	EELQSQVELLNSFEK	2	EELQSQVELLNSFEK2	24982.3	29739.9	27859.6
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	EELQSQVELLNSFEK	EELQSQVELLNSFEK	3	EELQSQVELLNSFEK3	8205.69	3172.19	
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	EELQTSLSR	EELQTSLSR	2	EELQTSLSR2	8851.49	9367.04	9149.54
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	EELRQENLSWQHELHQLR	EELRQENLSWQHELHQLR	4	EELRQENLSWQHELHQLR4	38245.3	38831.8	40058.1
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	EELSALVAPAFAHTSQVLIDK	EELSALVAPAFAHTSQVLIDK	3	EELSALVAPAFAHTSQVLIDK3	53549.8	53287.8	45980.8
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	EELSSGDSLSPDPWK	EELSSGDSLSPDPWK	2	EELSSGDSLSPDPWK2	5221.32	7209.62	8906.86
I6L9G5	I6L9G5	RCN3_RAT	Rcn3	Reticulocalbin-3	1	EELTAFLHPEEFPHMR	EELTAFLHPEEFPHMR	3	EELTAFLHPEEFPHMR3	42175	49412.4	38727.5
I6L9G5	I6L9G5	RCN3_RAT	Rcn3	Reticulocalbin-3	1	EELTAFLHPEEFPHMR	EELTAFLHPEEFPHMR	4	EELTAFLHPEEFPHMR4	92628.8	127441	91855.2
Q5U302	Q5U302	Q5U302_RAT	Ctnna1	Catenin alpha 1	1	EELVAAVDDVRK	EELVAAVDDVRK	3	EELVAAVDDVRK3		6454.03	
Q6P7P5	Q6P7P5	5MP2_RAT	Bzw1	eIF5-mimic protein 2	1	EELVAEQAIK	EELVAEQAIK	2	EELVAEQAIK2	48460.8	52723.8	40896.7
Q9WTT7	Q9WTT7	5MP1_RAT	Bzw2	eIF5-mimic protein 1	1	EELVAEQALK	EELVAEQALK	2	EELVAEQALK2	48460.8	52723.8	40896.7
Q8CIN9	Q8CIN9	RFFL_RAT	Rffl	E3 ubiquitin-protein ligase rififylin	1	EELVFLVLGQQPVISEADR	EELVFLVLGQQPVISEADR	3	EELVFLVLGQQPVISEADR3	10886.6	3661.8	1120.69
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	EELVSNLGTIAR	EELVSNLGTIAR	2	EELVSNLGTIAR2	56991.5	52837.3	44305.2
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	EELYQGDAFHQADTHIFIIMGASGDLAK	EELYQGDAFHQADTHIFIIMGASGDLAK	4	EELYQGDAFHQADTHIFIIMGASGDLAK4	12994.3	9563.53	9093.57
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	EELYQLQGQLER	EELYQLQGQLER	2	EELYQLQGQLER2	2414.52	6291.62	9488.09
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EELYQNLTR	EELYQNLTR	2	EELYQNLTR2	979788	1.02912e+06	1.04751e+06
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	EEMDASIK	EEMDASIK	2	EEMDASIK2	29128.3	21696.7	
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	EEMDFPQLMK	EEMDFPQLMK	2	EEMDFPQLMK2	84654.5	104397	109709
Q6IRE4	Q6IRE4	TS101_RAT	Tsg101	Tumor susceptibility gene 101 protein	1	EEMDGAQAELNALK	EEMDGAQAELNALK	2	EEMDGAQAELNALK2	12039.4	10107.7	13564
Q03343	Q04400;Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	0	EEMEELQAYNR	EEMEELQAYNR	2	EEMEELQAYNR2	16099.8	10253.4	15971.5
Q03343	Q04400;Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	0	EEMEELQAYNRR	EEMEELQAYNRR	3	EEMEELQAYNRR3	32243	57892	50632.8
D4A7D3	D4A7D3	D4A7D3_RAT	Tbk1	TANK-binding kinase 1	1	EEMEGVVK	EEMEGVVK	2	EEMEGVVK2	4268.19		5191.49
Q5BJT7	Q5BJT7	CCD93_RAT	Ccdc93	Coiled-coil domain-containing protein 93	1	EEMGDYIR	EEMGDYIR	2	EEMGDYIR2	10057.7	10231.9	9490.34
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	EEMHLEDSANFIK	EEMHLEDSANFIK	2	EEMHLEDSANFIK2	17892.6	14159	13066.7
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	EEMHLEDSANFIK	EEMHLEDSANFIK	3	EEMHLEDSANFIK3	143823	153144	159661
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	EEMIHNLQ	EEMIHNLQ	2	EEMIHNLQ2	55537.4	43531.6	43436.2
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	EEMISYFLR	EEMISYFLR	2	EEMISYFLR2	349464	380085	372194
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	EEMMQTLNK	EEMMQTLNK	2	EEMMQTLNK2	66396.8	63181.7	68547.3
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	EEMNEDHSTPK	EEMNEDHSTPK	2	EEMNEDHSTPK2			1509.39
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	EEMNEDHSTPK	EEMNEDHSTPK	3	EEMNEDHSTPK3			7946.27
Q641X3	Q641X3	HEXA_RAT	Hexa	Beta-hexosaminidase subunit alpha	1	EEMPVQYMK	EEMPVQYMK	2	EEMPVQYMK2	64480.1	64741.2	82447.6
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	EEMSELAR	EEMSELAR	2	EEMSELAR2	19278.1	19771.9	17272.5
P20760	P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	1	EEMTQSQVSITCMVK	EEMTQSQVSITC(UniMod:4)MVK	2	EEMTQSQVSITC(UniMod:4)MVK2	140277	94132.6	107389
P20760	P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	1	EEMTQSQVSITCMVK	EEMTQSQVSITC(UniMod:4)MVK	3	EEMTQSQVSITC(UniMod:4)MVK3	35152.5	24092.6	29326.9
Q66H84	Q66H84;Q80ZF4	MAPK3_RAT	Mapkapk3	MAP kinase-activated protein kinase 3	0	EEMTSALATMR	EEMTSALATMR	2	EEMTSALATMR2	9666.25	11647.2	10403.8
F7FG68	F7FG68	F7FG68_RAT	Syvn1	Synoviolin 1	1	EEMVTGAK	EEMVTGAK	2	EEMVTGAK2	36748.8	41676.3	48673
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	EENAQELPVK	EENAQELPVK	2	EENAQELPVK2	4400.81	2191.68	3227.71
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	EENCHLNTELQEAK	EENC(UniMod:4)HLNTELQEAK	3	EENC(UniMod:4)HLNTELQEAK3	13729.5	8999.87	10737.1
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	EENEEQSFK	EENEEQSFK	2	EENEEQSFK2	8346.54	11706.8	3600.85
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	EENFVASVGPEVIKPVFDLGETEEK	EENFVASVGPEVIKPVFDLGETEEK	3	EENFVASVGPEVIKPVFDLGETEEK3	15567.1	11294.9	17100.2
Q63377	Q63377	AT1B3_RAT	Atp1b3	Sodium/potassium-transporting ATPase subunit beta-3	1	EENIANIVTYPDDGLIDLK	EENIANIVTYPDDGLIDLK	3	EENIANIVTYPDDGLIDLK3	16774	23606.8	29321.7
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	EENIQTLLINPNIATVQTSQGLADK	EENIQTLLINPNIATVQTSQGLADK	3	EENIQTLLINPNIATVQTSQGLADK3	2331.9	2568.37	2728.25
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	EENKGGEDKLK	EENKGGEDKLK	2	EENKGGEDKLK2			6251.06
Q6IE52	Q6IE52	MUG2_RAT	Mug2	Murinoglobulin-2	1	EENLCIHSSCTAER	EENLC(UniMod:4)IHSSC(UniMod:4)TAER	2	EENLC(UniMod:4)IHSSC(UniMod:4)TAER2	14465.2	16301.3	8755.82
Q6IE52	Q6IE52	MUG2_RAT	Mug2	Murinoglobulin-2	1	EENLCIHSSCTAER	EENLC(UniMod:4)IHSSC(UniMod:4)TAER	3	EENLC(UniMod:4)IHSSC(UniMod:4)TAER3	236970	172922	134386
Q99MB4	Q99MB4	ZNG1_RAT	Zng1	Zinc-regulated GTPase metalloprotein activator 1	1	EENLDFIIK	EENLDFIIK	2	EENLDFIIK2		3495.91	3506.15
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	EENLIPYSPDVQVHAER	EENLIPYSPDVQVHAER	3	EENLIPYSPDVQVHAER3	47332.8	44403.8	51952.9
F1LVL6	F1LVL6	F1LVL6_RAT	Crtc3	CREB regulated transcription coactivator 3	1	EENLLNVPKPLPK	EENLLNVPKPLPK	3	EENLLNVPKPLPK3	13007.1	16249.7	10864.8
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	EENNHLQEELER	EENNHLQEELER	3	EENNHLQEELER3	10037.7	9005.97	8968.72
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	EENSCIHSSCTAER	EENSC(UniMod:4)IHSSC(UniMod:4)TAER	2	EENSC(UniMod:4)IHSSC(UniMod:4)TAER2	13062.8		34548.7
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	EENSCIHSSCTAER	EENSC(UniMod:4)IHSSC(UniMod:4)TAER	3	EENSC(UniMod:4)IHSSC(UniMod:4)TAER3			40329.9
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	EENSTLREPSR	EENSTLREPSR	3	EENSTLREPSR3	18718.9	22205.1	29128.9
D3Z8F6	D3Z8F6	D3Z8F6_RAT	Dennd1b	DENN domain containing 1B	1	EENTEKPFSADSVSVPTVVEK	EENTEKPFSADSVSVPTVVEK	3	EENTEKPFSADSVSVPTVVEK3	18248.9	22864	19855.7
Q9QYF3	Q9QYF3	MYO5A_RAT	Myo5a	Unconventional myosin-Va	1	EENTLLK	EENTLLK	1	EENTLLK1	2627.58		
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	EENVAGVGAK	EENVAGVGAK	2	EENVAGVGAK2	327847	334059	330812
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	EENVGLHQTLDQTLNELNCI	EENVGLHQTLDQTLNELNC(UniMod:4)I	3	EENVGLHQTLDQTLNELNC(UniMod:4)I3	858748	540871	578156
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	EEPAGEER	EEPAGEER	2	EEPAGEER2			12663.3
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	EEPAMSMDANGK	EEPAMSMDANGK	2	EEPAMSMDANGK2	58646.8	46965.2	44729
D3ZCD0	D3ZCD0	D3ZCD0_RAT	Tek	receptor protein-tyrosine kinase	1	EEPAVQFNSGTLALNR	EEPAVQFNSGTLALNR	2	EEPAVQFNSGTLALNR2	13648.1	9234.62	
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	EEPCLLK	EEPC(UniMod:4)LLK	1	EEPC(UniMod:4)LLK1	60817	89891.8	78715.3
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	EEPCLLK	EEPC(UniMod:4)LLK	2	EEPC(UniMod:4)LLK2	8.38361e+06	8.02121e+06	9.90502e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	EEPCLLKR	EEPC(UniMod:4)LLKR	2	EEPC(UniMod:4)LLKR2	112550	144520	145106
F1M1E4	F1M1E4	F1M1E4_RAT	Pnkd	PNKD metallo-beta-lactamase domain containing	1	EEPEPLSPELEYIPR	EEPEPLSPELEYIPR	2	EEPEPLSPELEYIPR2	3604.27	6600.63	10945.1
D4ABT8	D4ABT8	D4ABT8_RAT	Hnrnpul2	Heterogeneous nuclear ribonucleoprotein U-like 2	1	EEPFFPPPEEFVFIHAVPVEER	EEPFFPPPEEFVFIHAVPVEER	3	EEPFFPPPEEFVFIHAVPVEER3	14210.9		
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	EEPGFLTGLK	EEPGFLTGLK	2	EEPGFLTGLK2	6181.38	9834.41	5952.4
Q3T1I9	Q3T1I9	RPAP1_RAT	Rpap1	RNA polymerase II-associated protein 1	1	EEPIMSTCTGESGTR	EEPIMSTC(UniMod:4)TGESGTR	2	EEPIMSTC(UniMod:4)TGESGTR2	10848.9	8192.13	8419.35
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	EEPIYIITEFMAK	EEPIYIITEFMAK	2	EEPIYIITEFMAK2	144045	141605	143905
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	EEPIYIITEFMAK	EEPIYIITEFMAK	3	EEPIYIITEFMAK3	28459.1	22064.8	34479.5
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	EEPLFAAR	EEPLFAAR	2	EEPLFAAR2	15418.3	15777.8	31555.2
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	EEPLPSR	EEPLPSR	2	EEPLPSR2	146956	169512	163427
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	EEPPSLRPAPPPISGGGYR	EEPPSLRPAPPPISGGGYR	3	EEPPSLRPAPPPISGGGYR3	3.48045e+07	3.25865e+07	3.30429e+07
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	EEPPSLRPAPPPISGGGYR	EEPPSLRPAPPPISGGGYR	4	EEPPSLRPAPPPISGGGYR4	82468.5	63969.4	76813.2
P21744	P21744	IBP4_RAT	Igfbp4	Insulin-like growth factor-binding protein 4	1	EEPRPVPQGSCQSELHR	EEPRPVPQGSC(UniMod:4)QSELHR	3	EEPRPVPQGSC(UniMod:4)QSELHR3	3063.47	1794.17	3014.22
P21744	P21744	IBP4_RAT	Igfbp4	Insulin-like growth factor-binding protein 4	1	EEPRPVPQGSCQSELHR	EEPRPVPQGSC(UniMod:4)QSELHR	4	EEPRPVPQGSC(UniMod:4)QSELHR4	15241.8	5185.77	4184.55
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	EEPSADALLPIDCR	EEPSADALLPIDC(UniMod:4)R	2	EEPSADALLPIDC(UniMod:4)R2	1.51995e+06	1.16166e+06	1.15747e+06
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	EEPSADALLPIDCR	EEPSADALLPIDC(UniMod:4)R	3	EEPSADALLPIDC(UniMod:4)R3	163688	114501	102571
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	EEPSNNVK	EEPSNNVK	2	EEPSNNVK2			74884.9
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	EEPSPATK	EEPSPATK	2	EEPSPATK2			68530.4
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	EEPVEALTSSR	EEPVEALTSSR	2	EEPVEALTSSR2	697323	786778	746331
A0A8I5ZUI2	A0A8I5ZUI2	A0A8I5ZUI2_RAT	Ano10	Anoctamin	1	EEPVYSSYK	EEPVYSSYK	2	EEPVYSSYK2	63874.5	53256.2	
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	EEQATLHLECR	EEQATLHLEC(UniMod:4)R	3	EEQATLHLEC(UniMod:4)R3	6620.74	6237.02	5882.85
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	EEQAVLVVR	EEQAVLVVR	2	EEQAVLVVR2		13703.6	3803.82
F7EYK0	F7EYK0	F7EYK0_RAT	Fkbp5	peptidylprolyl isomerase	1	EEQCILYLGPQYGFGEAGKPK	EEQC(UniMod:4)ILYLGPQYGFGEAGKPK	3	EEQC(UniMod:4)ILYLGPQYGFGEAGKPK3	13004.5	10072	7509.9
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	EEQCVSFNSR	EEQC(UniMod:4)VSFNSR	2	EEQC(UniMod:4)VSFNSR2	112157	119008	112718
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	EEQDKYAIGSYTR	EEQDKYAIGSYTR	3	EEQDKYAIGSYTR3	4328.39		5997.79
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	EEQEFVQK	EEQEFVQK	2	EEQEFVQK2	17371.4	28565.4	11760.9
P08290	P08290	ASGR2_RAT	Asgr2	Asialoglycoprotein receptor 2	1	EEQEFVVK	EEQEFVVK	2	EEQEFVVK2	49063.2	40480.9	27381.8
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	EEQELYQK	EEQELYQK	2	EEQELYQK2	20132.4	18156.5	20854.6
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	EEQETSSWTQCTER	EEQETSSWTQC(UniMod:4)TER	2	EEQETSSWTQC(UniMod:4)TER2	5304.51	8131.33	7059.35
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	EEQEVFVHSGPNSQK	EEQEVFVHSGPNSQK	3	EEQEVFVHSGPNSQK3	9200.84	11290.5	15622.2
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	EEQIEELK	EEQIEELK	2	EEQIEELK2	9275.1	4694.95	6840.7
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	EEQMDGTVTLK	EEQMDGTVTLK	2	EEQMDGTVTLK2	2371.51		4928.48
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	EEQNSVVCSCAK	EEQNSVVC(UniMod:4)SC(UniMod:4)AK	2	EEQNSVVC(UniMod:4)SC(UniMod:4)AK2	188482	146462	138516
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	EEQNSVVCSCAK	EEQNSVVC(UniMod:4)SC(UniMod:4)AK	3	EEQNSVVC(UniMod:4)SC(UniMod:4)AK3	209871	211521	220780
Q6AXY8	Q6AXY8	Q6AXY8_RAT	Dhrs1	Dehydrogenase/reductase 1	1	EEQPEDPLFK	EEQPEDPLFK	2	EEQPEDPLFK2	10424.1	9191.75	11496.9
Q6AXY8	Q6AXY8	Q6AXY8_RAT	Dhrs1	Dehydrogenase/reductase 1	1	EEQPEDPLFKK	EEQPEDPLFKK	3	EEQPEDPLFKK3	27055.4	20732.3	43530.8
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	EEQQDDTVYMGK	EEQQDDTVYMGK	2	EEQQDDTVYMGK2	74191.9	74654.9	91343.5
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	EEQQDILSK	EEQQDILSK	2	EEQQDILSK2	38663.9	35178.2	34786.4
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	EEQQLQGNINQLK	EEQQLQGNINQLK	2	EEQQLQGNINQLK2	3471.71	1955.37	4389.92
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	EEQSQITSQVTGQIGWR	EEQSQITSQVTGQIGWR	2	EEQSQITSQVTGQIGWR2	2593.86	2235.95	
D3ZZL9	D3ZZL9	GCC2_RAT	Gcc2	GRIP and coiled-coil domain-containing protein 2	1	EEQSYVVEK	EEQSYVVEK	2	EEQSYVVEK2		4176.94	3403.66
Q6IE64	Q6IE64	C1RL_RAT	C1rl	Complement C1r subcomponent-like protein	1	EEQTGTLSCPSSR	EEQTGTLSC(UniMod:4)PSSR	2	EEQTGTLSC(UniMod:4)PSSR2	6381.17	6251.01	6507.82
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	EEQVDSMK	EEQVDSMK	2	EEQVDSMK2	27995.3	26552.1	14709.7
P04642	P04642;A0A8I6AAU7;A0A8I6ASS6;A0A8I6A2A3;A0A8I6A9V1;A0A8I6GK09	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	EEQVPQNK	EEQVPQNK	1	EEQVPQNK1	57983.1		125439
P04642	P04642;A0A8I6AAU7;A0A8I6ASS6;A0A8I6A2A3;A0A8I6A9V1;A0A8I6GK09	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	EEQVPQNK	EEQVPQNK	2	EEQVPQNK2			66491.9
A0A8I6G6W8	A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	EEQVVQVWSK	EEQVVQVWSK	2	EEQVVQVWSK2	2135.56	0	2846.65
P20761	P20761	IGG2B_RAT	Igh-1a	Ig gamma-2B chain C region	1	EEQYNSTFR	EEQYNSTFR	2	EEQYNSTFR2	65655.1	42994.3	53570.7
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	EERTFHIFYYLLSGAGEHLK	EERTFHIFYYLLSGAGEHLK	3	EERTFHIFYYLLSGAGEHLK3	22526.8	14037.4	22915.7
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	EERTFHIFYYLLSGAGEHLK	EERTFHIFYYLLSGAGEHLK	4	EERTFHIFYYLLSGAGEHLK4	94231.3	88909.3	90956.4
P08650	P08650	CO5_RAT	C5	Complement C5	1	EESASGSSHAVMDILLPTGIGANQEDLR	EESASGSSHAVMDILLPTGIGANQEDLR	3	EESASGSSHAVMDILLPTGIGANQEDLR3	96916.1	82237.7	94217.9
P08650	P08650	CO5_RAT	C5	Complement C5	1	EESASGSSHAVMDILLPTGIGANQEDLR	EESASGSSHAVMDILLPTGIGANQEDLR	4	EESASGSSHAVMDILLPTGIGANQEDLR4	7259.5	1346.81	9132.42
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	EESDPEYR	EESDPEYR	2	EESDPEYR2	12995.4	10140.3	
A0A8I5XWT0	A0A8I5XWT0	A0A8I5XWT0_RAT	Cd55	CD55 molecule (Cromer blood group)	1	EESDSYAYR	EESDSYAYR	2	EESDSYAYR2	21965.1	20592.6	27453.8
A0A0G2QC40	A0A0G2QC40	A0A0G2QC40_RAT	Mkrn1	RING-type E3 ubiquitin transferase	1	EESEKEPTTVETEK	EESEKEPTTVETEK	2	EESEKEPTTVETEK2	2913.28		2515.62
A0A0G2QC40	A0A0G2QC40	A0A0G2QC40_RAT	Mkrn1	RING-type E3 ubiquitin transferase	1	EESEKEPTTVETEK	EESEKEPTTVETEK	3	EESEKEPTTVETEK3	28813.1	26780.4	18044.4
P63329	P20651;P63329	PP2BA_RAT	Ppp3ca	Protein phosphatase 3 catalytic subunit alpha	0	EESESVLTLK	EESESVLTLK	2	EESESVLTLK2	50822.9	75934.6	55864.8
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	EESFGPIMIISR	EESFGPIMIISR	2	EESFGPIMIISR2	4335.54		
Q924C3	Q924C3	ENPP1_RAT	Enpp1	Ectonucleotide pyrophosphatase/phosphodiesterase family member 1	1	EESFLSQCPIK	EESFLSQC(UniMod:4)PIK	2	EESFLSQC(UniMod:4)PIK2	10170.7	6442.85	4656.91
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	EESFNSSDSK	EESFNSSDSK	2	EESFNSSDSK2	27429.7	25877.7	
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	EESFTIHGTNLPVSR	EESFTIHGTNLPVSR	3	EESFTIHGTNLPVSR3	21568.4	23336.1	25641.6
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	EESGVEEPTHR	EESGVEEPTHR	2	EESGVEEPTHR2	9764.67		6047.65
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	EESGVEEPTHR	EESGVEEPTHR	3	EESGVEEPTHR3	13960.6		8576
Q9JKC9	Q9JKC9	SYNRG_RAT	Synrg	Synergin gamma	1	EESGVGVFPSQDPVQPR	EESGVGVFPSQDPVQPR	2	EESGVGVFPSQDPVQPR2	3538	2722.22	
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	EESISILHEEYETK	EESISILHEEYETK	3	EESISILHEEYETK3	7523.91	13835.1	11507.6
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	EESIVHSYPCDWR	EESIVHSYPC(UniMod:4)DWR	3	EESIVHSYPC(UniMod:4)DWR3	14034	22588.4	10721.4
Q4KLN7	Q4KLN7	ARFG3_RAT	Arfgap3	ADP-ribosylation factor GTPase-activating protein 3	1	EESIVSSLR	EESIVSSLR	2	EESIVSSLR2	5869	4243.57	8417.46
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	EESLDEALLR	EESLDEALLR	2	EESLDEALLR2	70251.6	78124.1	87602.2
A0A8I6ASK6	A0A8I6ASK6	A0A8I6ASK6_RAT	Fcrl1	Fc receptor-like 1	1	EESLELCR	EESLELC(UniMod:4)R	2	EESLELC(UniMod:4)R2	769129	664867	696120
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	EESLEVVNSILQK	EESLEVVNSILQK	2	EESLEVVNSILQK2	47031.2	43189	49697.2
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	EESLEVVNSILQK	EESLEVVNSILQK	3	EESLEVVNSILQK3	3859.08	7866.82	6513.12
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	EESLIQESASK	EESLIQESASK	2	EESLIQESASK2	7632.93	4674.85	5034.41
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	EESPPLIGQQSTVSDVPR	EESPPLIGQQSTVSDVPR	2	EESPPLIGQQSTVSDVPR2	1.85921e+07	1.97196e+07	1.87907e+07
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	EESPPLIGQQSTVSDVPR	EESPPLIGQQSTVSDVPR	3	EESPPLIGQQSTVSDVPR3	9.42832e+06	9.96958e+06	9.54683e+06
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	EESQQLEEELESLEER	EESQQLEEELESLEER	3	EESQQLEEELESLEER3	16461.9	19663.1	26162.5
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	EESQQLEEELESLEERLEK	EESQQLEEELESLEERLEK	3	EESQQLEEELESLEERLEK3			3095.46
Q66H63	Q66H63	GDAP2_RAT	Gdap2	Ganglioside-induced differentiation-associated-protein 2	1	EESQSLPSLPADIGNAEGEPVVPER	EESQSLPSLPADIGNAEGEPVVPER	3	EESQSLPSLPADIGNAEGEPVVPER3	11360.6	16547.9	14156.3
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	EESQVPATQTVQR	EESQVPATQTVQR	2	EESQVPATQTVQR2	52581.4	48055.9	43828.6
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	EESSCIHSSCTAER	EESSC(UniMod:4)IHSSC(UniMod:4)TAER	2	EESSC(UniMod:4)IHSSC(UniMod:4)TAER2	132685	109004	74224.2
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	EESSCIHSSCTAER	EESSC(UniMod:4)IHSSC(UniMod:4)TAER	3	EESSC(UniMod:4)IHSSC(UniMod:4)TAER3			12126.7
D3ZL85	D3ZL85	D3ZL85_RAT	Hccs	Holocytochrome c-type synthase	1	EESSIPR	EESSIPR	2	EESSIPR2	10829.3	13059.9	4416.07
Q6AYD4	Q6AYD4	ESAM_RAT	Esam	Endothelial cell-selective adhesion molecule	1	EESSSHPWEAPFLIWFLEQEGKEPK	EESSSHPWEAPFLIWFLEQEGKEPK	4	EESSSHPWEAPFLIWFLEQEGKEPK4	21902.4	19332.1	34166.3
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	EESTVFSQAIHYANR	EESTVFSQAIHYANR	3	EESTVFSQAIHYANR3	13417.1	12039.2	10510.4
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	EESWGPPR	EESWGPPR	2	EESWGPPR2	13779.3	14233.8	15140.7
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	EESWNIHFFEYGR	EESWNIHFFEYGR	3	EESWNIHFFEYGR3	10067.8	18480.7	13142.6
Q63663	Q63663	GBP2_RAT	Gbp2	Guanylate-binding protein 2	1	EESYQEHVR	EESYQEHVR	2	EESYQEHVR2	3165.02		2394.82
Q63663	Q63663	GBP2_RAT	Gbp2	Guanylate-binding protein 2	1	EESYQEHVR	EESYQEHVR	3	EESYQEHVR3	27502.1	30394.5	26388.6
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	EETDGLHEELEFIR	EETDGLHEELEFIR	3	EETDGLHEELEFIR3	15109.9	10117	10700.6
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	EETDHLIK	EETDHLIK	2	EETDHLIK2	3838.48	3610.9	
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	EETDVLEASLCSLR	EETDVLEASLC(UniMod:4)SLR	2	EETDVLEASLC(UniMod:4)SLR2	6100.34	5937.06	8121.05
B0BN19	B0BN19	B0BN19_RAT	Rab22a	RAB22A, member RAS oncogene family	1	EETFSTLK	EETFSTLK	2	EETFSTLK2	15374.7	10978.7	13823.8
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	EETFTLSTIK	EETFTLSTIK	2	EETFTLSTIK2	19696.2	25004.3	34559
O35314	O35314	SCG1_RAT	Chgb	Secretogranin-1	1	EETGAPVEDSPGQAK	EETGAPVEDSPGQAK	2	EETGAPVEDSPGQAK2	21551.6	26836.8	21554.5
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	EETHFALEGLELIPGR	EETHFALEGLELIPGR	3	EETHFALEGLELIPGR3	5084.31		3751.96
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	EETIFLHDGLIR	EETIFLHDGLIR	3	EETIFLHDGLIR3	9681.14	12612.6	24242
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	EETNIEAK	EETNIEAK	2	EETNIEAK2	176936	186893	184160
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	EETPGALR	EETPGALR	2	EETPGALR2	80455.7	82074.9	62153.2
P08082	P08082	CLCB_RAT	Cltb	Clathrin light chain B	1	EETPGTEWEK	EETPGTEWEK	2	EETPGTEWEK2	152019	157901	167640
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	EETPTEGGALSLKPGLPIR	EETPTEGGALSLKPGLPIR	3	EETPTEGGALSLKPGLPIR3	5323.45	9413.79	6978.19
Q6AYY8	Q6AYY8	ACATN_RAT	Slc33a1	Acetyl-coenzyme A transporter 1	1	EETQGITDTYK	EETQGITDTYK	2	EETQGITDTYK2	518.098	3677.72	4132.77
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	EETVLATVQALHTASHLSQQADLR	EETVLATVQALHTASHLSQQADLR	3	EETVLATVQALHTASHLSQQADLR3	21339.2	11987.4	16184.4
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	EETVLATVQALHTASHLSQQADLR	EETVLATVQALHTASHLSQQADLR	4	EETVLATVQALHTASHLSQQADLR4	26576.3	34243	23680.3
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	EETVNDFWR	EETVNDFWR	2	EETVNDFWR2	30664.3	29109.7	32208.1
P18421	P18421	PSB1_RAT	Psmb1	Proteasome subunit beta type-1	1	EETVPLR	EETVPLR	2	EETVPLR2	286391	164488	227652
P18421	P18421	PSB1_RAT	Psmb1	Proteasome subunit beta type-1	1	EETVPLRK	EETVPLRK	2	EETVPLRK2	23990.4	20900.8	12718
P18421	P18421	PSB1_RAT	Psmb1	Proteasome subunit beta type-1	1	EETVPLRKD	EETVPLRKD	2	EETVPLRKD2	101447	92854.1	85958.2
D4A3E1	D4A3E1	D4A3E1_RAT	Hnrnpll	Heterogeneous nuclear ribonucleoprotein L-like	1	EETYEEDREFESQAK	EETYEEDREFESQAK	3	EETYEEDREFESQAK3	6455.47	5471.9	9349.94
M0R8J3	M0R8J3	M0R8J3_RAT	Jmy	Junction mediating and regulatory protein, p53 cofactor	1	EEVAASVHAQR	EEVAASVHAQR	3	EEVAASVHAQR3	1788.84		
D3ZYR1	D3ZYR1	FCHO2_RAT	Fcho2	F-BAR domain only protein 2	1	EEVAGTLEAVQAIQNITQALQK	EEVAGTLEAVQAIQNITQALQK	3	EEVAGTLEAVQAIQNITQALQK3	5707.12	4504.58	980.17
Q6P752	Q6P752	TOIP2_RAT	Tor1aip2	Torsin-1A-interacting protein 2	1	EEVAQETLR	EEVAQETLR	2	EEVAQETLR2	9856.67	11694.1	9252.32
Q6P752	Q6P752	TOIP2_RAT	Tor1aip2	Torsin-1A-interacting protein 2	1	EEVAQETLRK	EEVAQETLRK	3	EEVAQETLRK3	14907.4	17368.7	15101.6
A0A8I6A371	A0A8I6A371	A0A8I6A371_RAT	Nmi	N-myc (and STAT) interactor	1	EEVAQNVISMGTHVVQMEGTSVK	EEVAQNVISMGTHVVQMEGTSVK	3	EEVAQNVISMGTHVVQMEGTSVK3	12982.4	6646	10249.8
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	EEVASLQAVMK	EEVASLQAVMK	2	EEVASLQAVMK2	21434.3	24393	13154.2
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	EEVEDLCR	EEVEDLC(UniMod:4)R	2	EEVEDLC(UniMod:4)R2	28238.9	24475.3	21132.2
D3ZGA5	D3ZGA5	D3ZGA5_RAT	Rilp	Rab interacting lysosomal protein	1	EEVEQILQER	EEVEQILQER	2	EEVEQILQER2	3762.31	4026.7	4510.99
Q3B8N7	P62501;Q3B8N7;Q9EQZ1;D3ZDW3	T22D4_RAT	Tsc22d4	TSC22 domain family protein 4	0	EEVEVLK	EEVEVLK	1	EEVEVLK1	1003.26		
Q3B8N7	P62501;Q3B8N7;Q9EQZ1;D3ZDW3	T22D4_RAT	Tsc22d4	TSC22 domain family protein 4	0	EEVEVLK	EEVEVLK	2	EEVEVLK2	168281	172415	178293
P62501	P62501;D3ZDW3	T22D1_RAT	Tsc22d1	TSC22 domain family protein 1	0	EEVEVLKEQIK	EEVEVLKEQIK	3	EEVEVLKEQIK3	13310.2	20032.9	21256
Q3B8N7	Q3B8N7;Q9EQZ1	T22D4_RAT	Tsc22d4	TSC22 domain family protein 4	0	EEVEVLKEQIR	EEVEVLKEQIR	3	EEVEVLKEQIR3	10019.5	5040.53	7151.25
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	EEVGEEAIVELVENGK	EEVGEEAIVELVENGK	2	EEVGEEAIVELVENGK2	187809	185006	191015
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	EEVGEEAIVELVENGK	EEVGEEAIVELVENGK	3	EEVGEEAIVELVENGK3	172933	138746	182442
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	EEVGEEAIVELVENGKK	EEVGEEAIVELVENGKK	2	EEVGEEAIVELVENGKK2	6803.2	5818.15	5181.34
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	EEVGEEAIVELVENGKK	EEVGEEAIVELVENGKK	3	EEVGEEAIVELVENGKK3	121575	153485	149181
Q64165	Q64165	Q64165_RAT	Gcnt1	Glucosaminyl (N-acetyl) transferase 1	1	EEVGFPIAYSIVVHHK	EEVGFPIAYSIVVHHK	4	EEVGFPIAYSIVVHHK4	3870.39		2820.19
Q2PQA9	Q2PQA9;Q6QLM7	KINH_RAT	Kif5b	Kinesin-1 heavy chain	0	EEVKEVLQALEELAVNYDQK	EEVKEVLQALEELAVNYDQK	3	EEVKEVLQALEELAVNYDQK3	6935.96		9651.76
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	EEVKEVYMGNVIQGGEGQAPTR	EEVKEVYMGNVIQGGEGQAPTR	3	EEVKEVYMGNVIQGGEGQAPTR3	44578.1	63644.4	73891.7
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	EEVLEMR	EEVLEMR	2	EEVLEMR2	52596.6	51990.5	46970.6
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	EEVLLDNIPR	EEVLLDNIPR	2	EEVLLDNIPR2	19711.5	25298	16708.6
A0A0G2K1A4	A0A0G2K1A4;A0A8I5ZM01	A0A0G2K1A4_RAT	Evi5l	Ecotropic viral integration site 5-like	0	EEVMAVR	EEVMAVR	2	EEVMAVR2	18539.8	19703.9	17698.3
B2RYM5	B2RYM5	BRCC3_RAT	Brcc3	Lys-63-specific deubiquitinase BRCC36	1	EEVMGLCIGELNDDVR	EEVMGLC(UniMod:4)IGELNDDVR	2	EEVMGLC(UniMod:4)IGELNDDVR2	18978.4	11293.8	21424.4
A0A8I6AS17	A0A8I6AS17	A0A8I6AS17_RAT	Bsdc1	BSD domain containing 1	1	EEVPTDLR	EEVPTDLR	2	EEVPTDLR2	48606.6	41304.5	32210.3
A0A096MJ11	A0A096MJ11	A0A096MJ11_RAT	Gsdmd	Gasdermin D	1	EEVQITQVHSHEGSGQFTLPGASCLQGEGK	EEVQITQVHSHEGSGQFTLPGASC(UniMod:4)LQGEGK	4	EEVQITQVHSHEGSGQFTLPGASC(UniMod:4)LQGEGK4	19895.7	28580.7	26712.3
Q5QE80	Q5QE80	AOXC_RAT	Aox3	Aldehyde oxidase 3	1	EEVSLLTAAPGGMVEYR	EEVSLLTAAPGGMVEYR	3	EEVSLLTAAPGGMVEYR3	26101.9	6826.12	13552.8
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	EEVSTVELIK	EEVSTVELIK	2	EEVSTVELIK2	5407.15	4007.57	4533.26
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	EEVTAIVK	EEVTAIVK	2	EEVTAIVK2	20211.1	17460.2	19904.4
A0A0G2K6C7	A0A0G2K6C7	A0A0G2K6C7_RAT	Trim5	Tripartite motif-containing 5	1	EEVTCPICLELLK	EEVTC(UniMod:4)PIC(UniMod:4)LELLK	2	EEVTC(UniMod:4)PIC(UniMod:4)LELLK2	2855.73	4975.62	
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	EEVVAMIGDGPCVVK	EEVVAMIGDGPC(UniMod:4)VVK	2	EEVVAMIGDGPC(UniMod:4)VVK2	6227.86	6555.27	3143.48
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	EEVVGVAQAINK	EEVVGVAQAINK	2	EEVVGVAQAINK2	109921	77289.5	79253.3
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	EEVVGVAQAINKK	EEVVGVAQAINKK	2	EEVVGVAQAINKK2	11353		9778.06
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	EEVVGVAQAINKK	EEVVGVAQAINKK	3	EEVVGVAQAINKK3	116858	96926	102553
A0A8I6A822	A0A8I6A822	A0A8I6A822_RAT	Tm9sf3	Transmembrane 9 superfamily member	1	EEVVLWMNTVGPYHNR	EEVVLWMNTVGPYHNR	3	EEVVLWMNTVGPYHNR3	68845.7	57325.4	64291.4
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	EEVVMVPGVQNSLLLK	EEVVMVPGVQNSLLLK	2	EEVVMVPGVQNSLLLK2	25091.3		15956
Q5XI72	Q5XI72	IF4H_RAT	Eif4h	Eukaryotic translation initiation factor 4H	1	EEVVQKEQE	EEVVQKEQE	2	EEVVQKEQE2	12424.5	11271.3	11267.6
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	EEVYENVHSK	EEVYENVHSK	2	EEVYENVHSK2	2673.89		1458
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	EEVYENVHSK	EEVYENVHSK	3	EEVYENVHSK3	14818.2	16947.9	21086
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	EEVYIIQAPTPEIK	EEVYIIQAPTPEIK	2	EEVYIIQAPTPEIK2	10930.2	20757.6	13207.1
Q64591	Q64591	DECR_RAT	Decr1	2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], mitochondrial	1	EEWDVIEGLIR	EEWDVIEGLIR	2	EEWDVIEGLIR2	2255.93	12494.6	25949.5
Q64591	Q64591	DECR_RAT	Decr1	2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], mitochondrial	1	EEWDVIEGLIR	EEWDVIEGLIR	3	EEWDVIEGLIR3	1725.18		
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	EEWIAYICR	EEWIAYIC(UniMod:4)R	2	EEWIAYIC(UniMod:4)R2	41206.9	32600.3	35712.2
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	EEWLLGPGQCCFTCR	EEWLLGPGQC(UniMod:4)C(UniMod:4)FTC(UniMod:4)R	2	EEWLLGPGQC(UniMod:4)C(UniMod:4)FTC(UniMod:4)R2	6278.72	12431.4	13404.2
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	EEYADFKPFEQAWEVK	EEYADFKPFEQAWEVK	3	EEYADFKPFEQAWEVK3	2177.09	4552.11	2619.05
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	EEYAVLISEAQAIK	EEYAVLISEAQAIK	2	EEYAVLISEAQAIK2	16455.5	12203.1	18242.7
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	EEYDDLAESEQFGVVMGTVPR	EEYDDLAESEQFGVVMGTVPR	3	EEYDDLAESEQFGVVMGTVPR3	17671.1	13042.3	15134.2
Q4V8E4	Q4V8E4	CFA36_RAT	Cfap36	Cilia- and flagella-associated protein 36	1	EEYDQEEER	EEYDQEEER	2	EEYDQEEER2	6043.52		
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	EEYFDPSVVGWTVK	EEYFDPSVVGWTVK	2	EEYFDPSVVGWTVK2	35845.7	33774.7	19258.2
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	EEYFDPSVVGWTVK	EEYFDPSVVGWTVK	3	EEYFDPSVVGWTVK3		3452.01	4340.91
F1MAH6	F1MAH6	F1MAH6_RAT	Cdh11	Cadherin 11	1	EEYHVVIQAK	EEYHVVIQAK	3	EEYHVVIQAK3	13079.6	5140.2	12226.6
Q63372	Q63372	NRX1A_RAT	Nrxn1	Neurexin-1	1	EEYIATFK	EEYIATFK	2	EEYIATFK2	17326.8	16078.1	9481.21
B4F767	B4F767	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	1	EEYIMLLTDWR	EEYIMLLTDWR	2	EEYIMLLTDWR2	33561.4	29862	
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	EEYLLLK	EEYLLLK	2	EEYLLLK2	8781.29	13969.7	7683.06
D3ZSU7	D3ZSU7	D3ZSU7_RAT	Mien1	Migration and invasion enhancer 1	1	EEYPGIEIESR	EEYPGIEIESR	2	EEYPGIEIESR2	8527.31	3701.58	6215.55
Q5I0E7	Q5I0E7	TMED9_RAT	Tmed9	Transmembrane emp24 domain-containing protein 9	1	EEYQPATPGLGMFVEVKDPEDK	EEYQPATPGLGMFVEVKDPEDK	3	EEYQPATPGLGMFVEVKDPEDK3	40948	27408	36610.4
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	EEYSDLK	EEYSDLK	2	EEYSDLK2	40491.1	31994	34493
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	EEYSDLKLPR	EEYSDLKLPR	3	EEYSDLKLPR3	175927	217999	179857
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	EEYTLLVK	EEYTLLVK	2	EEYTLLVK2	1750.21	3114.88	
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	EFAAFFAK	EFAAFFAK	2	EFAAFFAK2	26292.5	24641.2	20923.2
P36970	P36970	GPX4_RAT	Gpx4	Phospholipid hydroperoxide glutathione peroxidase	1	EFAAGYNVR	EFAAGYNVR	2	EFAAGYNVR2	115034	134047	131320
Q6NYB7	A0A8I6A3I5;Q6NYB7	RAB1A_RAT	Rab1A	Ras-related protein Rab-1A	0	EFADSLGIPFLETSAK	EFADSLGIPFLETSAK	2	EFADSLGIPFLETSAK2	898897	824979	952686
Q6NYB7	A0A8I6A3I5;Q6NYB7	RAB1A_RAT	Rab1A	Ras-related protein Rab-1A	0	EFADSLGIPFLETSAK	EFADSLGIPFLETSAK	3	EFADSLGIPFLETSAK3	63461.4	51521.2	60060
P10536	P10536	RAB1B_RAT	Rab1b	Ras-related protein Rab-1B	1	EFADSLGVPFLETSAK	EFADSLGVPFLETSAK	2	EFADSLGVPFLETSAK2	1.3583e+06	1.42385e+06	1.52887e+06
P10536	P10536	RAB1B_RAT	Rab1b	Ras-related protein Rab-1B	1	EFADSLGVPFLETSAK	EFADSLGVPFLETSAK	3	EFADSLGVPFLETSAK3	76603.3	87258	120060
B0BN65	B0BN65	B0BN65_RAT	Cyria	CYFIP related Rac1 interactor A	1	EFAEILHFTLR	EFAEILHFTLR	3	EFAEILHFTLR3	13040.5	10860.8	12408.9
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	EFAELLNEVENER	EFAELLNEVENER	2	EFAELLNEVENER2	11402.7	9608.59	8202.33
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	EFAELLNEVENER	EFAELLNEVENER	3	EFAELLNEVENER3	7135.1	5479.78	
Q8K4V4	Q8K4V4	SNX27_RAT	Snx27	Sorting nexin-27	1	EFAILHQNLK	EFAILHQNLK	3	EFAILHQNLK3	11389.2	19030.8	17570.6
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	EFANFDFDVWR	EFANFDFDVWR	2	EFANFDFDVWR2	16288.8	10293.9	11688.7
Q8K4V4	Q8K4V4	SNX27_RAT	Snx27	Sorting nexin-27	1	EFANFTFPR	EFANFTFPR	2	EFANFTFPR2	8874.71		6306.31
P97689	P97689	UT1_RAT	Slc14a1	Urea transporter 1	1	EFANWLK	EFANWLK	2	EFANWLK2	64482.8	61480.5	56583.8
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	EFAPVYPILVQLLQK	EFAPVYPILVQLLQK	3	EFAPVYPILVQLLQK3	2034.15		
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	EFAQVIK	EFAQVIK	2	EFAQVIK2	146393	148283	175267
F1LS35	F1LS35	F1LS35_RAT	Hps5	Hermansky-Pudlak syndrome 5 protein homolog	1	EFASHQEEEQPEQGCCANR	EFASHQEEEQPEQGC(UniMod:4)C(UniMod:4)ANR	3	EFASHQEEEQPEQGC(UniMod:4)C(UniMod:4)ANR3		969.102	1217.87
D3ZE26	D3ZE26	D3ZE26_RAT	Tmcc2	Transmembrane and coiled-coil domain family 2	1	EFASLIR	EFASLIR	2	EFASLIR2	72485.5	66208.1	73833.8
Q9Z272	Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	1	EFATLIIDILSEAK	EFATLIIDILSEAK	2	EFATLIIDILSEAK2	7137.17		
F7EPH4	F7EPH4	F7EPH4_RAT	Ppa1	inorganic diphosphatase	1	EFAVDIIK	EFAVDIIK	2	EFAVDIIK2	26131.7	29402.9	31979.2
F1M386	F1M386	RPGF2_RAT	Rapgef2	Rap guanine nucleotide exchange factor 2	1	EFAVTATPEQYSLCEVSVTPEGVIK	EFAVTATPEQYSLC(UniMod:4)EVSVTPEGVIK	3	EFAVTATPEQYSLC(UniMod:4)EVSVTPEGVIK3	3706.36	1337.81	3594.2
P97711	P97711	GRK6_RAT	Grk6	G protein-coupled receptor kinase 6	1	EFCATRPELTR	EFC(UniMod:4)ATRPELTR	3	EFC(UniMod:4)ATRPELTR3	62191.3	56980.3	63978.9
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	EFCENLSADCR	EFC(UniMod:4)ENLSADC(UniMod:4)R	2	EFC(UniMod:4)ENLSADC(UniMod:4)R2	63294.4	49019.5	47016.4
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	EFCQLGPSDSHEVLALDGFHR	EFC(UniMod:4)QLGPSDSHEVLALDGFHR	3	EFC(UniMod:4)QLGPSDSHEVLALDGFHR3	6275.39	13123.8	8391.59
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	EFCQLGPSDSHEVLALDGFHR	EFC(UniMod:4)QLGPSDSHEVLALDGFHR	4	EFC(UniMod:4)QLGPSDSHEVLALDGFHR4	12688.9	5186.63	9845.18
B2RYG6	A0A8I6A324;B2RYG6	OTUB1_RAT	Otub1	Ubiquitin thioesterase OTUB1	0	EFCQQEVEPMCK	EFC(UniMod:4)QQEVEPMC(UniMod:4)K	2	EFC(UniMod:4)QQEVEPMC(UniMod:4)K2	44768.7	40157.2	39367
F1M7Z1	F1M7Z1	F1M7Z1_RAT	Edc3	Enhancer of mRNA-decapping protein 3	1	EFCTDSGLVVPSVSYELHK	EFC(UniMod:4)TDSGLVVPSVSYELHK	3	EFC(UniMod:4)TDSGLVVPSVSYELHK3	23401.3	21039.3	25068.2
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	EFDDLSPEQQR	EFDDLSPEQQR	2	EFDDLSPEQQR2	1.36228e+06	1.34274e+06	1.51654e+06
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	EFDDLSPEQQR	EFDDLSPEQQR	3	EFDDLSPEQQR3	43333.4	39428.3	47648.5
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	EFDELSPSAQR	EFDELSPSAQR	2	EFDELSPSAQR2	853743	903181	908395
P70483	P70483	STRN_RAT	Strn	Striatin	1	EFDFLVASEEGDNESR	EFDFLVASEEGDNESR	2	EFDFLVASEEGDNESR2	22140.4	15784.5	
Q66HC5	Q66HC5	NUP93_RAT	Nup93	Nuclear pore complex protein Nup93	1	EFDMILGK	EFDMILGK	2	EFDMILGK2	8018.73	10744.6	8177.39
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	EFDPTITDGSLSVPSR	EFDPTITDGSLSVPSR	2	EFDPTITDGSLSVPSR2	837018	754720	746663
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	EFDPTITDGSLSVPSR	EFDPTITDGSLSVPSR	3	EFDPTITDGSLSVPSR3	96966.4	97340.1	111152
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	EFDPTITDGSLSVPSRR	EFDPTITDGSLSVPSRR	3	EFDPTITDGSLSVPSRR3	192423	225227	224754
I6L9G5	I6L9G5	RCN3_RAT	Rcn3	Reticulocalbin-3	1	EFDQLTPEESQAR	EFDQLTPEESQAR	2	EFDQLTPEESQAR2	203604	212531	207743
I6L9G5	I6L9G5	RCN3_RAT	Rcn3	Reticulocalbin-3	1	EFDQLTPEESQAR	EFDQLTPEESQAR	3	EFDQLTPEESQAR3	9810.87	11356.2	13200
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	EFDYLPPVDSR	EFDYLPPVDSR	2	EFDYLPPVDSR2	324700	197444	270695
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	EFEALMAEK	EFEALMAEK	2	EFEALMAEK2	17471.3	17763	13770.3
Q6AYD0	Q6AYD0	Q6AYD0_RAT	Lrrc17	Leucine rich repeat containing 17	1	EFEDVHELK	EFEDVHELK	3	EFEDVHELK3	2821		1951.79
Q6AYD0	Q6AYD0	Q6AYD0_RAT	Lrrc17	Leucine rich repeat containing 17	1	EFEDVHELKK	EFEDVHELKK	3	EFEDVHELKK3	8216.44	3549.55	6834.21
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	EFEETMDALQADIDQLEAEK	EFEETMDALQADIDQLEAEK	3	EFEETMDALQADIDQLEAEK3	28054.4	33164.1	20311.7
Q4FZX7	Q4FZX7	SRPRB_RAT	Srprb	Signal recognition particle receptor subunit beta	1	EFEFSQLPLK	EFEFSQLPLK	2	EFEFSQLPLK2	48483.9	36986	51091.7
P34900	P34900	SDC2_RAT	Sdc2	Syndecan-2	1	EFEISEAEEK	EFEISEAEEK	2	EFEISEAEEK2	6084.14	7839.34	
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	EFEKDKDDDEVFEK	EFEKDKDDDEVFEK	3	EFEKDKDDDEVFEK3	6300.12		2143.79
A0A8I6AE33	A0A8I6AE33	A0A8I6AE33_RAT	Wdr37	WD repeat domain 37	1	EFENLYIENLELR	EFENLYIENLELR	2	EFENLYIENLELR2	8403.73	8569.52	9258.92
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	EFENWLER	EFENWLER	2	EFENWLER2	20690.3	29001.5	24080.5
Q5U2R9	Q5U2R9	Q5U2R9_RAT	Scfd2	Sec1 family domain containing 2	1	EFEPHAIGGGAK	EFEPHAIGGGAK	3	EFEPHAIGGGAK3	17746.3	13069.6	16785.8
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	EFEPLLNWMK	EFEPLLNWMK	2	EFEPLLNWMK2	703873	1.00048e+06	903255
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	EFEPPSAGAAATAK	EFEPPSAGAAATAK	2	EFEPPSAGAAATAK2	477277	453584	469195
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	EFEPPSAGAAATAK	EFEPPSAGAAATAK	3	EFEPPSAGAAATAK3	7453.64	4918.3	4443
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	EFEPPSAGAAATAKPGQEIR	EFEPPSAGAAATAKPGQEIR	3	EFEPPSAGAAATAKPGQEIR3	135086	181551	146826
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	EFEQFNK	EFEQFNK	2	EFEQFNK2	6382.26		
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	EFEQIDK	EFEQIDK	2	EFEQIDK2	125548	140550	127681
O88775	O88775	EMB_RAT	Emb	Embigin	1	EFEQIEQLK	EFEQIEQLK	2	EFEQIEQLK2	6606.19	3450.93	8138.26
Q6Y1S1	Q6Y1S1	MYD88_RAT	Myd88	Myeloid differentiation primary response protein MyD88	1	EFETRPDPTR	EFETRPDPTR	3	EFETRPDPTR3	14575.5	25952.5	16747.4
P07633	P07633	PCCB_RAT	Pccb	Propionyl-CoA carboxylase beta chain, mitochondrial	1	EFFEIMPNYAK	EFFEIMPNYAK	2	EFFEIMPNYAK2	13697.2	12179.3	10612.7
D4A0Z1	D4A0Z1	D4A0Z1_RAT	Tspan14	Tetraspanin	1	EFFESNIR	EFFESNIR	2	EFFESNIR2	23175.3	12565.3	27673.5
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	EFFLLIMR	EFFLLIMR	2	EFFLLIMR2	3314.64	6649.85	
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	EFFNGKEPSR	EFFNGKEPSR	2	EFFNGKEPSR2	43361.8	47340.1	28216.3
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	EFFNGKEPSR	EFFNGKEPSR	3	EFFNGKEPSR3	310900	433694	437582
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	EFFQDDVFPDTAVTWASALDAK	EFFQDDVFPDTAVTWASALDAK	3	EFFQDDVFPDTAVTWASALDAK3	14812.9	6883.94	11119.6
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	EFFSVGQK	EFFSVGQK	2	EFFSVGQK2	5518.93		
O08557	Q6MG60;O08557	DDAH1_RAT	Ddah1	N(G),N(G)-dimethylarginine dimethylaminohydrolase 1	0	EFFVGLSK	EFFVGLSK	2	EFFVGLSK2	10707.9	5620.48	
P12711	P12711	ADHX_RAT	Adh5	Alcohol dehydrogenase class-3	1	EFGATECINPQDFSK	EFGATEC(UniMod:4)INPQDFSK	2	EFGATEC(UniMod:4)INPQDFSK2	5162.3	9648.65	15115.2
Q5XIG0	Q5XIG0	NUDT9_RAT	Nudt9	ADP-ribose pyrophosphatase, mitochondrial	1	EFGEEALNSLQK	EFGEEALNSLQK	2	EFGEEALNSLQK2	3663.52	2142.15	1254.6
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	EFGETAEGWK	EFGETAEGWK	2	EFGETAEGWK2	117970	99135.3	66914
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	EFGETASEK	EFGETASEK	2	EFGETASEK2	51177.9	45079.6	53255.3
O70257	O70257	STX7_RAT	Stx7	Syntaxin-7	1	EFGFLPTTPSEQR	EFGFLPTTPSEQR	2	EFGFLPTTPSEQR2	307488	263697	309590
Q8K3P7	Q8K3P7	HINT3_RAT	Hint3	Adenosine 5'-monophosphoramidase HINT3	1	EFGFLSR	EFGFLSR	2	EFGFLSR2	16320	17983.7	13477.3
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	EFGFSELNVK	EFGFSELNVK	2	EFGFSELNVK2	74343.1	147642	98191.4
Q5RJR2	Q5RJR2;A0A8I6AHG1;B0BMY7;A0A8I6GGS8	TWF1_RAT	Twf1	Twinfilin-1	0	EFGGGHIK	EFGGGHIK	2	EFGGGHIK2	26304.6		
Q5RJR2	Q5RJR2;A0A8I6GGS8	TWF1_RAT	Twf1	Twinfilin-1	0	EFGGGHIKDEVFGTVK	EFGGGHIKDEVFGTVK	3	EFGGGHIKDEVFGTVK3	5984.33	7863.27	
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	EFGIDPK	EFGIDPK	2	EFGIDPK2	70004.4	65017	68455.1
A0A8I5ZSB0	A0A8I5ZSB0	A0A8I5ZSB0_RAT	Igtp	Interferon gamma induced GTPase	1	EFGILTPDNLTETR	EFGILTPDNLTETR	2	EFGILTPDNLTETR2	4574.93	5030.47	5258.1
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	EFGNLHNTVALLVLHTDVSSQR	EFGNLHNTVALLVLHTDVSSQR	4	EFGNLHNTVALLVLHTDVSSQR4	15721.2	23535.7	19815
Q7TQ16	Q7TQ16	QCR8_RAT	Uqcrq	Cytochrome b-c1 complex subunit 8	1	EFGNLTR	EFGNLTR	2	EFGNLTR2	254288	263707	229610
P19939	P19939	APOC1_RAT	Apoc1	Apolipoprotein C-I	1	EFGNTLEDK	EFGNTLEDK	2	EFGNTLEDK2	3.23806e+07	2.79265e+07	3.41953e+07
P19939	P19939	APOC1_RAT	Apoc1	Apolipoprotein C-I	1	EFGNTLEDKAR	EFGNTLEDKAR	2	EFGNTLEDKAR2	4445.92	3684.06	10588.3
P19939	P19939	APOC1_RAT	Apoc1	Apolipoprotein C-I	1	EFGNTLEDKAR	EFGNTLEDKAR	3	EFGNTLEDKAR3	48268.3	75460.8	71314.5
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	EFGPVVIDYGK	EFGPVVIDYGK	2	EFGPVVIDYGK2	67036.3	91863.1	79259.2
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	EFGSKTSDSDIFTDIENPSSHVPEFSSSSK	EFGSKTSDSDIFTDIENPSSHVPEFSSSSK	4	EFGSKTSDSDIFTDIENPSSHVPEFSSSSK4	8866.03	10821.3	
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	EFGSVDDENKPIWMHAEER	EFGSVDDENKPIWMHAEER	3	EFGSVDDENKPIWMHAEER3	4459.08	6465.63	5691.15
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	EFGSVDDENKPIWMHAEER	EFGSVDDENKPIWMHAEER	4	EFGSVDDENKPIWMHAEER4	4680.05	2111.71	8489.21
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	EFGSVDDENKPIWMHAEEREECK	EFGSVDDENKPIWMHAEEREEC(UniMod:4)K	4	EFGSVDDENKPIWMHAEEREEC(UniMod:4)K4		12979.6	16454.4
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	EFGTNIK	EFGTNIK	1	EFGTNIK1	31006.1	28095.7	30312.7
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	EFGTNIK	EFGTNIK	2	EFGTNIK2	2.8972e+06	3.40268e+06	3.58441e+06
Q80VJ4	Q80VJ4	GPCP1_RAT	Gpcpd1	Glycerophosphocholine phosphodiesterase GPCPD1	1	EFGVNGLIYDR	EFGVNGLIYDR	2	EFGVNGLIYDR2	10056.1	10284.5	6244.7
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	EFGVSPDK	EFGVSPDK	2	EFGVSPDK2	185370	129524	176860
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	EFHITCGPDSLATDATK	EFHITC(UniMod:4)GPDSLATDATK	3	EFHITC(UniMod:4)GPDSLATDATK3	28489.1	18681.2	20063.4
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	EFHLHLR	EFHLHLR	1	EFHLHLR1	6184.9	3525.51	4347.88
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	EFHLHLR	EFHLHLR	2	EFHLHLR2	2.97876e+06	2.59111e+06	2.15657e+06
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	EFHLHLRLPISVR	EFHLHLRLPISVR	3	EFHLHLRLPISVR3	3501.94	7207.89	6035.93
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	EFHLHLRLPISVR	EFHLHLRLPISVR	4	EFHLHLRLPISVR4	387200	478599	462903
Q63945	Q63945;A0A8I6A0A9	SET_RAT	Set	Protein SET	0	EFHLNESGDPSSK	EFHLNESGDPSSK	3	EFHLNESGDPSSK3	21857.3	11293.4	16967.5
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	EFHMVQVSSSSK	EFHMVQVSSSSK	3	EFHMVQVSSSSK3	21346.6	19365.2	21929.1
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	EFHTTGLAWSK	EFHTTGLAWSK	2	EFHTTGLAWSK2	70662.8	52279.9	60402.7
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	EFHTTGLAWSK	EFHTTGLAWSK	3	EFHTTGLAWSK3	442538	401139	329331
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	EFHVEEVLVAPGFNVHAK	EFHVEEVLVAPGFNVHAK	3	EFHVEEVLVAPGFNVHAK3	40631	33140.2	32588.2
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	EFHVEEVLVAPGFNVHAK	EFHVEEVLVAPGFNVHAK	4	EFHVEEVLVAPGFNVHAK4	17880.3	18393.9	19881.1
P06883	P06883	GLUC_RAT	Gcg	Pro-glucagon	1	EFIAWLVK	EFIAWLVK	2	EFIAWLVK2	18879.2	30459.1	15681.7
A0A8I6GBQ0	A0A8I6GBQ0	A0A8I6GBQ0_RAT	Stk26	Protein kinase domain-containing protein	1	EFIDACLNK	EFIDAC(UniMod:4)LNK	2	EFIDAC(UniMod:4)LNK2	8664.36	8922.2	6630.5
A0A8I6GBQ0	A0A8I6GBQ0	A0A8I6GBQ0_RAT	Stk26	Protein kinase domain-containing protein	1	EFIDACLNKDPSFRPTAK	EFIDAC(UniMod:4)LNKDPSFRPTAK	3	EFIDAC(UniMod:4)LNKDPSFRPTAK3	5551.32	6107.79	7041.35
A0A8I6GBQ0	A0A8I6GBQ0	A0A8I6GBQ0_RAT	Stk26	Protein kinase domain-containing protein	1	EFIDACLNKDPSFRPTAK	EFIDAC(UniMod:4)LNKDPSFRPTAK	4	EFIDAC(UniMod:4)LNKDPSFRPTAK4	27229.9	30738.3	33489.9
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	EFIDFLK	EFIDFLK	2	EFIDFLK2	42596.5	54577.3	61716.2
D3ZQI6	D3ZQI6	D3ZQI6_RAT	Xpo4	Exportin 4	1	EFIDFSDTDEVFR	EFIDFSDTDEVFR	2	EFIDFSDTDEVFR2	5938.88		7853.21
Q5XIM0	Q5XIM0	Q5XIM0_RAT	Bcs1l	Mitochondrial chaperone BCS1	1	EFIDNPK	EFIDNPK	2	EFIDNPK2	28537	36748.8	26795.5
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	EFIDWMR	EFIDWMR	2	EFIDWMR2	234347	245607	209284
D4A565	D4A565	D4A565_RAT	Ndufb5	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial	1	EFIDYSPK	EFIDYSPK	2	EFIDYSPK2	68626.1	56229.9	79605.9
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	EFIEAEMK	EFIEAEMK	2	EFIEAEMK2	120259	96101.1	124534
P63100	P63100	CANB1_RAT	Ppp3r1	Calcineurin subunit B type 1	1	EFIEGVSQFSVK	EFIEGVSQFSVK	2	EFIEGVSQFSVK2	35222.2	24367.2	15122.3
D4A0T0	D4A0T0	D4A0T0_RAT	Ndufb10	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10	1	EFIEQQHAK	EFIEQQHAK	2	EFIEQQHAK2	16480.8	20861.9	16557.5
Q2TGK3	Q2TGK3	ZDHC3_RAT	Zdhhc3	Palmitoyltransferase ZDHHC3	1	EFIESLQLKPGQVVYK	EFIESLQLKPGQVVYK	2	EFIESLQLKPGQVVYK2	2132.18	2763.83	3820.45
Q2TGK3	Q2TGK3	ZDHC3_RAT	Zdhhc3	Palmitoyltransferase ZDHHC3	1	EFIESLQLKPGQVVYK	EFIESLQLKPGQVVYK	3	EFIESLQLKPGQVVYK3	13877.2	25532.8	24350.9
A0A8I6GBD2	A0A8I6GBD2	A0A8I6GBD2_RAT	Actr10	Actin related protein 10	1	EFIHILYFR	EFIHILYFR	3	EFIHILYFR3	8880.8	13582.5	10705.6
P20069	P20069	MPPA_RAT	Pmpca	Mitochondrial-processing peptidase subunit alpha	1	EFILMGR	EFILMGR	2	EFILMGR2	31957	22733.5	26469.4
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	EFILSLK	EFILSLK	2	EFILSLK2	23164.9	14615.8	15970.9
G3V7K5	G3V7K5	G3V7K5_RAT	Npc1	NPC intracellular cholesterol transporter 1	1	EFINFVK	EFINFVK	2	EFINFVK2	9376.25		7043.39
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	EFINLQSALESER	EFINLQSALESER	2	EFINLQSALESER2	25960.7	27328.2	36262.3
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	EFINLQSALESERR	EFINLQSALESERR	3	EFINLQSALESERR3	136062	114191	120501
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	EFIPQAFGMPLSQVIANDR	EFIPQAFGMPLSQVIANDR	3	EFIPQAFGMPLSQVIANDR3	13103	24845.6	19435.5
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	EFIPYMAK	EFIPYMAK	2	EFIPYMAK2	181896	244133	206060
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	EFIQDFQK	EFIQDFQK	2	EFIQDFQK2	64708.8	72034.2	70762.4
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	EFIQEPAK	EFIQEPAK	2	EFIQEPAK2	37675.9	37714.1	42162.2
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	EFIQLAGR	EFIQLAGR	2	EFIQLAGR2	8245.06	7966.33	7058.09
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	EFIQQPENK	EFIQQPENK	2	EFIQQPENK2	8159.9	10343.6	8409.64
Q5U2Z3	Q5U2Z3	NP1L4_RAT	Nap1l4	Nucleosome assembly protein 1-like 4	1	EFITGDVEPTDAESAWHSENEEDDK	EFITGDVEPTDAESAWHSENEEDDK	3	EFITGDVEPTDAESAWHSENEEDDK3	55595.3	69587.5	53145.9
Q64617	Q64617	KPCL_RAT	Prkch	Protein kinase C eta type	1	EFIWGVFGK	EFIWGVFGK	2	EFIWGVFGK2	2870.63	5279.13	
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	EFKDGAGDPSVVLTVDGK	EFKDGAGDPSVVLTVDGK	3	EFKDGAGDPSVVLTVDGK3	7565.51	4273.69	9637.64
Q5U3Y7	Q5U3Y7	SGMR2_RAT	Tmem97	Sigma intracellular receptor 2	1	EFKDPLMQEPPVWFK	EFKDPLMQEPPVWFK	3	EFKDPLMQEPPVWFK3	18016.3	17475.4	19472.5
Q04589	Q04589	FGFR1_RAT	Fgfr1	Fibroblast growth factor receptor 1	1	EFKPDHR	EFKPDHR	2	EFKPDHR2			41902.6
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	EFLAEGQDVGSFVAEK	EFLAEGQDVGSFVAEK	2	EFLAEGQDVGSFVAEK2	76757.4	92367.8	80605.1
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	EFLAEGQDVGSFVAEK	EFLAEGQDVGSFVAEK	3	EFLAEGQDVGSFVAEK3	20214.8	22014.9	28725.6
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	EFLAEGQDVGSFVAEKK	EFLAEGQDVGSFVAEKK	3	EFLAEGQDVGSFVAEKK3	15445.3	16054.5	16993.1
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	EFLALASSSLLK	EFLALASSSLLK	2	EFLALASSSLLK2	92651.9	91454.8	81525.3
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	EFLDFAQGVGGLACNLTDSYLQAR	EFLDFAQGVGGLAC(UniMod:4)NLTDSYLQAR	3	EFLDFAQGVGGLAC(UniMod:4)NLTDSYLQAR3	7012.28	19783.8	
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	EFLEELEESR	EFLEELEESR	2	EFLEELEESR2	75143.6	100871	80672.7
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	EFLEEVIQR	EFLEEVIQR	2	EFLEEVIQR2	1.51415e+06	1.65606e+06	1.75885e+06
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	EFLEEVIQR	EFLEEVIQR	3	EFLEEVIQR3	9696.15	6981.23	11041.2
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	EFLEKEELPR	EFLEKEELPR	2	EFLEKEELPR2	6433.6	11758.9	12678.2
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	EFLEKEELPR	EFLEKEELPR	3	EFLEKEELPR3	146193	196190	211647
D4ADQ1	D4ADQ1	D4ADQ1_RAT	Rrm2b	Ribonucleotide reductase regulatory TP53 inducible subunit M2B	1	EFLFNAIETMPYVK	EFLFNAIETMPYVK	2	EFLFNAIETMPYVK2	11737.1	19749.8	17413.3
Q9WV97	Q9WV97	TIM9_RAT	Timm9	Mitochondrial import inner membrane translocase subunit Tim9	1	EFLGTYNK	EFLGTYNK	2	EFLGTYNK2	17272	18793	17822.1
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	EFLHAQEEVK	EFLHAQEEVK	3	EFLHAQEEVK3	23955.5	10489.2	10369.7
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	EFLHAQEEVKR	EFLHAQEEVKR	3	EFLHAQEEVKR3	8287.24	15977.2	9465.74
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	EFLHCVQK	EFLHC(UniMod:4)VQK	2	EFLHC(UniMod:4)VQK2	7776.24	5320.96	7204.87
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	EFLIDVNQLCNAVVQR	EFLIDVNQLC(UniMod:4)NAVVQR	3	EFLIDVNQLC(UniMod:4)NAVVQR3		53540.4	62169.6
A0A0G2K7Y9	P08723;A0A0G2K7Y9	A0A0G2K7Y9_RAT	Zg16b	Zymogen granule protein 16B	0	EFLLEDGEHVTQVSGTR	EFLLEDGEHVTQVSGTR	3	EFLLEDGEHVTQVSGTR3	28540	23720.4	34886.3
Q4FZY0	Q4FZY0	EFHD2_RAT	Efhd2	EF-hand domain-containing protein D2	1	EFLLIFR	EFLLIFR	2	EFLLIFR2	65995.3	76768.8	57446.7
B0BN70	B0BN70	SMIM7_RAT	Smim7	Small integral membrane protein 7	1	EFLLSLR	EFLLSLR	2	EFLLSLR2	47367.9	28742.8	33163.9
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	EFLNELLK	EFLNELLK	2	EFLNELLK2	46030.7	65489.3	54562
F1LU71	F1LU71	AUHM_RAT	Auh	Methylglutaconyl-CoA hydratase, mitochondrial	1	EFLPQGPVAMR	EFLPQGPVAMR	2	EFLPQGPVAMR2	489905	480947	501697
D3ZUQ1	D3ZUQ1	D3ZUQ1_RAT	Lipo1	Lipase	1	EFLPTVVFSEYSK	EFLPTVVFSEYSK	2	EFLPTVVFSEYSK2	101773	55081.5	86344.7
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	EFLQNLDALHDHLATIYPGMR	EFLQNLDALHDHLATIYPGMR	3	EFLQNLDALHDHLATIYPGMR3	6621.45	11629.1	9131.04
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	EFLQNLDALHDHLATIYPGMR	EFLQNLDALHDHLATIYPGMR	4	EFLQNLDALHDHLATIYPGMR4	28722.8	18860.5	20566.2
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	EFLSEKPR	EFLSEKPR	2	EFLSEKPR2	3963.41	5470.92	7948
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	EFLTIYIK	EFLTIYIK	2	EFLTIYIK2	14999.9	15534.2	14329.7
Q5XIG8	Q5XIG8	STRAP_RAT	Strap	Serine-threonine kinase receptor-associated protein	1	EFLVAGGEDFK	EFLVAGGEDFK	2	EFLVAGGEDFK2	72593.5	83185.6	60085.7
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	EFLVLALPGFVWK	EFLVLALPGFVWK	2	EFLVLALPGFVWK2		3322.41	4551.2
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	EFMCQNR	EFMC(UniMod:4)QNR	2	EFMC(UniMod:4)QNR2	12978	12078.6	10519.3
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	EFMGNQDNNSLK	EFMGNQDNNSLK	2	EFMGNQDNNSLK2	1767.57	1724.92	
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	EFMIMFDPNINHISK	EFMIMFDPNINHISK	3	EFMIMFDPNINHISK3		1898.22	
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	EFMNQHWYHCHTCK	EFMNQHWYHC(UniMod:4)HTC(UniMod:4)K	3	EFMNQHWYHC(UniMod:4)HTC(UniMod:4)K3	2185.64		2415.81
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	EFMNQHWYHCHTCK	EFMNQHWYHC(UniMod:4)HTC(UniMod:4)K	4	EFMNQHWYHC(UniMod:4)HTC(UniMod:4)K4	4244.82	1722.51	4171.52
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	EFMNYFHALEIGYR	EFMNYFHALEIGYR	3	EFMNYFHALEIGYR3	18027.2	25083	14639.7
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	EFMSQGNK	EFMSQGNK	1	EFMSQGNK1	21168.7	18093.4	12971.3
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	EFMSQGNK	EFMSQGNK	2	EFMSQGNK2	1.61301e+06	1.14943e+06	1.1252e+06
P62775	P62775	MTPN_RAT	Mtpn	Myotrophin	1	EFMWALK	EFMWALK	2	EFMWALK2	83890.9	61491.5	62692.7
P01026	P01026	CO3_RAT	C3	Complement C3	1	EFNADKGHK	EFNADKGHK	2	EFNADKGHK2			6870.84
P09895	A0A8I6GKE4;P09895	RL5_RAT	Rpl5	Large ribosomal subunit protein uL18	0	EFNAEVHR	EFNAEVHR	2	EFNAEVHR2	3506.96	5502.4	6393.25
A0A8I6ABM0	A0A8I6ABM0	A0A8I6ABM0_RAT	Rit1	Ras-like without CAAX 1	1	EFNCPFFETSAAYR	EFNC(UniMod:4)PFFETSAAYR	2	EFNC(UniMod:4)PFFETSAAYR2	2408.62	4167.61	2596.13
Q05962	Q05962	ADT1_RAT	Slc25a4	ADP/ATP translocase 1	1	EFNGLGDCLTK	EFNGLGDC(UniMod:4)LTK	2	EFNGLGDC(UniMod:4)LTK2	272615	243332	252629
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	EFNIAGFPTVR	EFNIAGFPTVR	2	EFNIAGFPTVR2	60439.5	83126.7	67280
F7EM42	F7EM42	F7EM42_RAT	Sash3	SAM and SH3 domain containing 3	1	EFNLDDNIPEDDSGVLTPEDSGK	EFNLDDNIPEDDSGVLTPEDSGK	3	EFNLDDNIPEDDSGVLTPEDSGK3	4626.7	11420.6	
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	EFNNLLVTGTDR	EFNNLLVTGTDR	2	EFNNLLVTGTDR2	37692.1	30906.8	42754.3
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	EFNNLLVTGTDRR	EFNNLLVTGTDRR	3	EFNNLLVTGTDRR3	16828.7	15530.9	5912.39
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	EFNPNEQSWR	EFNPNEQSWR	2	EFNPNEQSWR2	122202	104511	118781
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	EFNTQLAQK	EFNTQLAQK	2	EFNTQLAQK2	6121.96	7020.09	5015
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	EFNVNENQLR	EFNVNENQLR	2	EFNVNENQLR2	108857	89314.9	85007
P48508	P48508	GSH0_RAT	Gclm	Glutamate--cysteine ligase regulatory subunit	1	EFPDVLECTMSHAVEK	EFPDVLEC(UniMod:4)TMSHAVEK	3	EFPDVLEC(UniMod:4)TMSHAVEK3	18442.4	11030.4	7815.83
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	EFPFYNTVYILK	EFPFYNTVYILK	2	EFPFYNTVYILK2	22561.1	21672	19587.7
P27139	P27139	CAH2_RAT	Ca2	Carbonic anhydrase 2	1	EFPIANGDR	EFPIANGDR	2	EFPIANGDR2	31868.5	40747.4	22306
D3ZDR7	D3ZDR7	D3ZDR7_RAT	Themis2	Thymocyte selection associated family member 2	1	EFPTAYDLLGALQPGRPLR	EFPTAYDLLGALQPGRPLR	3	EFPTAYDLLGALQPGRPLR3	17662.3	12161.8	30959.1
A0A0G2K542	A0A0G2K542	A0A0G2K542_RAT	Ugp2	UTP--glucose-1-phosphate uridylyltransferase	1	EFPTVPLVK	EFPTVPLVK	2	EFPTVPLVK2	37612.5	35840.3	34050.7
P08650	P08650	CO5_RAT	C5	Complement C5	1	EFPYRIPLDLVPK	EFPYRIPLDLVPK	3	EFPYRIPLDLVPK3	7283.72	12230.3	13896.5
Q9JMA8	Q9JMA8	Q9JMA8_RAT	Extl3	Exostosin-like glycosyltransferase 3	1	EFQAALGGNVQR	EFQAALGGNVQR	2	EFQAALGGNVQR2	1894.28	2150.04	
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	EFQADKEQSEAELQTVR	EFQADKEQSEAELQTVR	3	EFQADKEQSEAELQTVR3	9695.41	7818.08	9418.43
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	EFQDASLR	EFQDASLR	2	EFQDASLR2	41143.9	30822	33922.4
Q7TP54	Q7TP54	RIPR2_RAT	Ripor2	Rho family-interacting cell polarization regulator 2	1	EFQDLNQEVTHLDDVLK	EFQDLNQEVTHLDDVLK	3	EFQDLNQEVTHLDDVLK3	10821.5	8592.84	11590.8
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	EFQEDPEMLMDLMYR	EFQEDPEMLMDLMYR	2	EFQEDPEMLMDLMYR2	22020.7	34130.7	35220.5
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	EFQEDPEMLMDLMYR	EFQEDPEMLMDLMYR	3	EFQEDPEMLMDLMYR3	6185.62	2544.74	5797.95
D3ZI07	O55165;D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	0	EFQEEIAR	EFQEEIAR	2	EFQEEIAR2	43251.8	36206.4	50660.2
A0A0G2K2Z2	A0A0G2K2Z2	A0A0G2K2Z2_RAT	Inpp5k	Inositol polyphosphate-5-phosphatase K	1	EFQEGPLLFPPTYK	EFQEGPLLFPPTYK	2	EFQEGPLLFPPTYK2	16636.1	22578.4	26773.3
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	EFQESFK	EFQESFK	2	EFQESFK2	30425.2	40486.7	31415.3
Q9WTS8	Q9WTS8	FCN1_RAT	Fcn1	Ficolin-1	1	EFQGQTSFAK	EFQGQTSFAK	2	EFQGQTSFAK2	130370	138140	135231
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	EFQLGESVK	EFQLGESVK	2	EFQLGESVK2	206079	207084	168253
Q9JID2	Q9JID2	GNA11_RAT	Gna11	Guanine nucleotide-binding protein subunit alpha-11	1	EFQLSDSAK	EFQLSDSAK	2	EFQLSDSAK2	4645.44	12292.9	7689.11
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	EFQPPSQIAESTIHEIPTK	EFQPPSQIAESTIHEIPTK	3	EFQPPSQIAESTIHEIPTK3	81042.2	102773	89539.7
Q5U2R0	Q5U2R0	MAT2B_RAT	Mat2b	Methionine adenosyltransferase 2 subunit beta	1	EFQQSNWHAVGCGFR	EFQQSNWHAVGC(UniMod:4)GFR	3	EFQQSNWHAVGC(UniMod:4)GFR3	6974.62	12379	19397.5
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	EFQQYLPVVMGPLMK	EFQQYLPVVMGPLMK	2	EFQQYLPVVMGPLMK2	48817	42098.6	60158.8
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	EFQQYLPVVMGPLMK	EFQQYLPVVMGPLMK	3	EFQQYLPVVMGPLMK3	26538.9	29761.7	31819.3
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	EFQSFLK	EFQSFLK	1	EFQSFLK1	15603.6	14860.2	15467.6
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	EFQSFLK	EFQSFLK	2	EFQSFLK2	2.07627e+06	2.1202e+06	2.21199e+06
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	EFQTIAR	EFQTIAR	2	EFQTIAR2	69906	90238.7	88647.5
Q64232	Q64232	TECR_RAT	Tecr	Very-long-chain enoyl-CoA reductase	1	EFRDYPPLR	EFRDYPPLR	3	EFRDYPPLR3	8124.92	16518.4	12318.1
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	EFSDIFR	EFSDIFR	2	EFSDIFR2	30735.9	14327.1	24403.5
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	EFSGGSYNTK	EFSGGSYNTK	2	EFSGGSYNTK2	2096.52	3863.46	3920.9
Q9WUD2	Q9WUD2	TRPV2_RAT	Trpv2	Transient receptor potential cation channel subfamily V member 2	1	EFSGPYQPLSR	EFSGPYQPLSR	2	EFSGPYQPLSR2	45731.2	48530	51050.3
Q6IRJ7	Q6IRJ7	Q6IRJ7_RAT	Anxa7	Annexin	1	EFSGYVESGLK	EFSGYVESGLK	2	EFSGYVESGLK2	50570.4	51007.8	61161.6
Q4V7C7	Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	1	EFSIDVGYER	EFSIDVGYER	2	EFSIDVGYER2	93766.3	70810.4	81498.7
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	EFSITDVVPYPISLR	EFSITDVVPYPISLR	2	EFSITDVVPYPISLR2	170832	224811	222443
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	EFSITDVVPYPISLR	EFSITDVVPYPISLR	3	EFSITDVVPYPISLR3	45433.2	59982.2	65985.1
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	EFSLLTTNEHWTPCILNEAEK	EFSLLTTNEHWTPC(UniMod:4)ILNEAEK	3	EFSLLTTNEHWTPC(UniMod:4)ILNEAEK3	4601.75	12318.6	4989.23
Q9JJM7	Q9JJM7	GP1BB_RAT	Gp1bb	Platelet glycoprotein Ib beta chain	1	EFSLTAPLVAESAGGGAS	EFSLTAPLVAESAGGGAS	2	EFSLTAPLVAESAGGGAS2	571856	514135	657015
Q9JJM7	Q9JJM7	GP1BB_RAT	Gp1bb	Platelet glycoprotein Ib beta chain	1	EFSLTAPLVAESAGGGAS	EFSLTAPLVAESAGGGAS	3	EFSLTAPLVAESAGGGAS3		7458.99	4813.19
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EFSMMFK	EFSMMFK	1	EFSMMFK1	6048.02	3970.36	4702.86
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EFSMMFK	EFSMMFK	2	EFSMMFK2	288582	298350	320324
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	EFSNFLK	EFSNFLK	2	EFSNFLK2	45079.6	48376.1	45845
Q9EPH8	B5DF80;Q9EPH8	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	0	EFSPFGTITSAK	EFSPFGTITSAK	2	EFSPFGTITSAK2	54010.8	41543.3	48192.7
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	EFSSHFK	EFSSHFK	2	EFSSHFK2	28712	26566.3	21512.2
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	EFSTLTELLK	EFSTLTELLK	2	EFSTLTELLK2	6341.52	8530.37	5987.75
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	EFSTLTELLKK	EFSTLTELLKK	3	EFSTLTELLKK3	7690.18		8164.56
P00507	A0A8I6GJD2;P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	0	EFSVYMTK	EFSVYMTK	2	EFSVYMTK2	169329	183432	185677
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	EFSWIVR	EFSWIVR	2	EFSWIVR2	118145	116544	112236
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	EFSYYCDNGFLTPSGSYWDYLR	EFSYYC(UniMod:4)DNGFLTPSGSYWDYLR	3	EFSYYC(UniMod:4)DNGFLTPSGSYWDYLR3	25034.4	20511.4	19662.8
Q6P9U8	Q6P9U8	EIF3H_RAT	Eif3h	Eukaryotic translation initiation factor 3 subunit H	1	EFTAQNLGK	EFTAQNLGK	2	EFTAQNLGK2	106745	125657	104941
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	EFTDGSFTQR	EFTDGSFTQR	2	EFTDGSFTQR2	219115	293769	258924
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	EFTDSTFR	EFTDSTFR	2	EFTDSTFR2	1.5923e+06	1.04186e+06	1.03111e+06
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	EFTDSTFREQVK	EFTDSTFREQVK	2	EFTDSTFREQVK2	1793.99		2707.36
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	EFTDSTFREQVK	EFTDSTFREQVK	3	EFTDSTFREQVK3	46467.7	22337.6	17729.8
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	EFTDSTFREQVKR	EFTDSTFREQVKR	4	EFTDSTFREQVKR4	15699.8	6281.14	8624.75
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	EFTEAFLGCPAIHPR	EFTEAFLGC(UniMod:4)PAIHPR	2	EFTEAFLGC(UniMod:4)PAIHPR2	21753.9	22473.7	25128.3
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	EFTEAFLGCPAIHPR	EFTEAFLGC(UniMod:4)PAIHPR	3	EFTEAFLGC(UniMod:4)PAIHPR3	69503.8	55511.3	63312.6
P67779	P67779;A0A8I5ZUY9	PHB1_RAT	Phb1	Prohibitin 1	0	EFTEAVEAK	EFTEAVEAK	2	EFTEAVEAK2	82960	93188.1	100329
B0BNA1	B0BNA1	SH3Y1_RAT	Sh3yl1	SH3 domain-containing YSC84-like protein 1	1	EFTEITSR	EFTEITSR	2	EFTEITSR2	9370.59	9790.28	8071.57
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	EFTGSTWQEK	EFTGSTWQEK	2	EFTGSTWQEK2	57986.5	59411.2	77608.7
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	EFTIDAVVK	EFTIDAVVK	2	EFTIDAVVK2	2.36042e+06	2.5908e+06	2.4624e+06
P11507	P18596;Q64578;P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	0	EFTLEFSR	EFTLEFSR	2	EFTLEFSR2	1.07809e+06	1.17032e+06	1.1738e+06
Q9EPJ3	Q9EPJ3	RT26_RAT	Mrps26	Small ribosomal subunit protein mS26	1	EFTLEVR	EFTLEVR	2	EFTLEVR2	10812.9		13853.6
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	EFTMAEIEHFVDPTEK	EFTMAEIEHFVDPTEK	2	EFTMAEIEHFVDPTEK2	4507.41	3720.41	2231.35
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	EFTMAEIEHFVDPTEK	EFTMAEIEHFVDPTEK	3	EFTMAEIEHFVDPTEK3	23760.8	18551.3	20761.9
Q9EPH8	D4A233;B5DF80;D3ZSR2;Q9EPH8;G3V9N0	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	0	EFTNVYIK	EFTNVYIK	2	EFTNVYIK2	59858.5	57957	48852.7
P02091	P11517;P02091	HBB1_RAT	Hbb	Hemoglobin subunit beta-1	0	EFTPCAQAAFQK	EFTPC(UniMod:4)AQAAFQK	2	EFTPC(UniMod:4)AQAAFQK2	895475	1.08073e+06	1.02525e+06
P02091	P11517;P02091	HBB1_RAT	Hbb	Hemoglobin subunit beta-1	0	EFTPCAQAAFQK	EFTPC(UniMod:4)AQAAFQK	3	EFTPC(UniMod:4)AQAAFQK3	15271.9	28015.1	25186.9
Q6AY04	Q6AY04	MAIP1_RAT	Maip1	m-AAA protease-interacting protein 1, mitochondrial	1	EFTQGVKPDWTIAR	EFTQGVKPDWTIAR	3	EFTQGVKPDWTIAR3	6374.85	3406.97	11549.1
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	EFTRPEEIIFLR	EFTRPEEIIFLR	2	EFTRPEEIIFLR2	18167.9	8112.87	
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	EFTRPEEIIFLR	EFTRPEEIIFLR	3	EFTRPEEIIFLR3	1.25645e+06	874521	779721
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	EFTTCLTTAGVK	EFTTC(UniMod:4)LTTAGVK	2	EFTTC(UniMod:4)LTTAGVK2	24871.5	14204.2	20773.7
A0A0G2K5E4	A0A0G2K5E4	A0A0G2K5E4_RAT	Dnaja3	DnaJ heat shock protein family (Hsp40) member A3	1	EFTVNIMDTCER	EFTVNIMDTC(UniMod:4)ER	2	EFTVNIMDTC(UniMod:4)ER2	5701.88	3247.58	2681.73
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	EFVAVTGAEEDR	EFVAVTGAEEDR	2	EFVAVTGAEEDR2	17908.9	8273.85	14238.5
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	EFVAVTGAEEDRAR	EFVAVTGAEEDRAR	3	EFVAVTGAEEDRAR3	12467.1	19679.8	13215.4
B0LT89	Q6V9V9;B0LT89	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	0	EFVEACLNK	EFVEAC(UniMod:4)LNK	2	EFVEAC(UniMod:4)LNK2	22991.4	30174.5	19884.9
B0LT89	B0LT89	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	1	EFVEACLNKEPSFRPTAK	EFVEAC(UniMod:4)LNKEPSFRPTAK	3	EFVEAC(UniMod:4)LNKEPSFRPTAK3	9907.02	12102	3407.37
B0LT89	B0LT89	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	1	EFVEACLNKEPSFRPTAK	EFVEAC(UniMod:4)LNKEPSFRPTAK	4	EFVEAC(UniMod:4)LNKEPSFRPTAK4	17919.2	24927.3	16298.5
B0BNA5	B0BNA5	COTL1_RAT	Cotl1	Coactosin-like protein	1	EFVISDR	EFVISDR	2	EFVISDR2	920865	764326	852305
B0BNA5	B0BNA5	COTL1_RAT	Cotl1	Coactosin-like protein	1	EFVISDRK	EFVISDRK	2	EFVISDRK2	80758.7	65089.9	80107.9
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	EFVITSLK	EFVITSLK	2	EFVITSLK2	39124	33392.4	30278.2
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	EFVLLFMVFDEKK	EFVLLFMVFDEKK	2	EFVLLFMVFDEKK2	46392.5	43558.2	33436.1
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	EFVLLFMVFDEKK	EFVLLFMVFDEKK	3	EFVLLFMVFDEKK3	124939	147643	134570
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	EFVLRDDLLEAR	EFVLRDDLLEAR	2	EFVLRDDLLEAR2	3912.32		2431.1
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	EFVLRDDLLEAR	EFVLRDDLLEAR	3	EFVLRDDLLEAR3	329116	342572	337293
Q68SB1	Q9ET50;Q68SB1	STAU2_RAT	Stau2	Double-stranded RNA-binding protein Staufen homolog 2	0	EFVMQVK	EFVMQVK	2	EFVMQVK2	14783.2	10288.2	
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	EFVSALR	EFVSALR	2	EFVSALR2	43225.1	45429.7	34524.4
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	EFVSAVAQVK	EFVSAVAQVK	2	EFVSAVAQVK2	28539	40171	33915.6
Q6P6Q9	Q6P6Q9	MICU1_RAT	Micu1	Calcium uptake protein 1, mitochondrial	1	EFVSIMK	EFVSIMK	2	EFVSIMK2	92378.7	108847	95160.2
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	EFVSISSPAHVAT	EFVSISSPAHVAT	2	EFVSISSPAHVAT2	29176.6	33188.3	
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	EFVSLYSDYILNK	EFVSLYSDYILNK	2	EFVSLYSDYILNK2	14295.1	16490.6	10011.8
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	EFVTGMSGMYHGDLTEK	EFVTGMSGMYHGDLTEK	3	EFVTGMSGMYHGDLTEK3	29551.8	27633.6	52313.1
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	EFVTHTK	EFVTHTK	2	EFVTHTK2	29679.2	21100	25541.6
P20786	P20786	PGFRA_RAT	Pdgfra	Platelet-derived growth factor receptor alpha	1	EFVVEVQAYPTPR	EFVVEVQAYPTPR	2	EFVVEVQAYPTPR2	22208.2	6320.85	9883.59
P09215	P09215	KPCD_RAT	Prkcd	Protein kinase C delta type	1	EFVWGLNK	EFVWGLNK	2	EFVWGLNK2	39812.7	33749.5	38144.1
Q9QXY4	Q9QXY4	OGFR_RAT	Ogfr	Opioid growth factor receptor	1	EFVWGPR	EFVWGPR	2	EFVWGPR2	23573.7	17924.5	22323.2
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	EFWEIVHSFTDEQK	EFWEIVHSFTDEQK	3	EFWEIVHSFTDEQK3	9058.85	7060.13	8943.93
G3V7P2	G3V7P2	G3V7P2_RAT	Fgl2	Fibrinogen-like 2	1	EFWLGNDK	EFWLGNDK	2	EFWLGNDK2	3.82921e+06	3.55626e+06	4.01805e+06
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	EFWLGNEALHSLTQAGDYSMR	EFWLGNEALHSLTQAGDYSMR	3	EFWLGNEALHSLTQAGDYSMR3	103740	133841	128325
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	EFYDGLFPR	EFYDGLFPR	2	EFYDGLFPR2	11043.8	10743.3	9821.97
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	EFYFAEAQEADFSDPAFISK	EFYFAEAQEADFSDPAFISK	3	EFYFAEAQEADFSDPAFISK3	926186	989117	938864
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	EFYILWTK	EFYILWTK	2	EFYILWTK2	983436	1.0871e+06	1.05611e+06
A0A8I6AR22	A0A8I6AR22	A0A8I6AR22_RAT	Zdhhc20	Palmitoyltransferase	1	EFYLSNSEK	EFYLSNSEK	2	EFYLSNSEK2	12635.8	11134.3	15681.5
A0A8I6AR22	A0A8I6AR22	A0A8I6AR22_RAT	Zdhhc20	Palmitoyltransferase	1	EFYLSNSEKER	EFYLSNSEKER	3	EFYLSNSEKER3	11053.1	15032.3	10220.3
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	EFYQVLHTHKPHFMALHCQEFGGK	EFYQVLHTHKPHFMALHC(UniMod:4)QEFGGK	4	EFYQVLHTHKPHFMALHC(UniMod:4)QEFGGK4	6937.18		3944.74
Q9QZR8	Q9QZR8	PDZD2_RAT	Pdzd2	PDZ domain-containing protein 2	1	EGAAAASVMR	EGAAAASVMR	2	EGAAAASVMR2	2523.09	5688.61	2828.04
A0A8I6A4A2	A0A8I6A4A2;A0A8I5ZMR7	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	0	EGAAGFFK	EGAAGFFK	2	EGAAGFFK2	63254.3	67453.5	62785.8
Q3T1K5	Q3T1K5	CAZA2_RAT	Capza2	F-actin-capping protein subunit alpha-2	1	EGAAHAFAQYNLDQFTPVK	EGAAHAFAQYNLDQFTPVK	3	EGAAHAFAQYNLDQFTPVK3	183908	184206	174666
B2GUZ5	B2GUZ5	CAZA1_RAT	Capza1	F-actin-capping protein subunit alpha-1	1	EGAAHAFAQYNMDQFTPVK	EGAAHAFAQYNMDQFTPVK	3	EGAAHAFAQYNMDQFTPVK3	320534	314721	366382
Q9JKC9	Q9JKC9	SYNRG_RAT	Synrg	Synergin gamma	1	EGADDFGEFQSEKPK	EGADDFGEFQSEKPK	3	EGADDFGEFQSEKPK3	608.109	5045.92	10482.5
Q8R3Z7	Q8R3Z7	Q8R3Z7_RAT	Ehd4	EH-domain containing 4	1	EGADEEEWVVAK	EGADEEEWVVAK	2	EGADEEEWVVAK2	22180.8	23274.3	19752.3
A0A8I6A6S4	A0A8I6A6S4	A0A8I6A6S4_RAT	Stim2	Stromal interaction molecule 2	1	EGAECELSR	EGAEC(UniMod:4)ELSR	2	EGAEC(UniMod:4)ELSR2	3024.31	3622.3	4817.81
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	EGAEHEEWGNAILVR	EGAEHEEWGNAILVR	3	EGAEHEEWGNAILVR3	7809.33	12573.1	14264.7
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	EGAETFADHR	EGAETFADHR	2	EGAETFADHR2	425447	303288	336991
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	EGAETFADHREGILK	EGAETFADHREGILK	3	EGAETFADHREGILK3	15273.9	21087	18615.7
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	EGAETFADHREGILK	EGAETFADHREGILK	4	EGAETFADHREGILK4	18789.4	13672.4	16250.3
Q9QWE9	Q9QWE9	GGT5_RAT	Ggt5	Glutathione hydrolase 5 proenzyme	1	EGAEVLYTGK	EGAEVLYTGK	2	EGAEVLYTGK2	87537.1	85313.8	82371.1
Q501W1	Q501W1	Q501W1_RAT	Txk	Tyrosine-protein kinase	1	EGAFIVR	EGAFIVR	2	EGAFIVR2		17196.4	9341.21
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	EGAFYSEK	EGAFYSEK	1	EGAFYSEK1	1576.57	2093.96	5780.12
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	EGAFYSEK	EGAFYSEK	2	EGAFYSEK2	434662	476299	544743
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	EGAGAVDEEDFIK	EGAGAVDEEDFIK	2	EGAGAVDEEDFIK2		10753.1	8575.44
Q5PQQ1	Q5PQQ1	GTPB3_RAT	Gtpbp3	tRNA modification GTPase GTPBP3, mitochondrial	1	EGAGAVEQEGVR	EGAGAVEQEGVR	2	EGAGAVEQEGVR2	2125.23		
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	EGAIHREEIVYNLDPLNNLGR	EGAIHREEIVYNLDPLNNLGR	3	EGAIHREEIVYNLDPLNNLGR3	1.30672e+07	1.46954e+07	1.40088e+07
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	EGAIHREEIVYNLDPLNNLGR	EGAIHREEIVYNLDPLNNLGR	4	EGAIHREEIVYNLDPLNNLGR4	1.63199e+07	21631.9	1.84847e+07
Q9QZM5	Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	1	EGAIIYVIK	EGAIIYVIK	2	EGAIIYVIK2	167681	145499	152845
F1M9D6	F1M9D6	F1M9D6_RAT	Stat1	Signal transducer and activator of transcription	1	EGAITFTWVER	EGAITFTWVER	2	EGAITFTWVER2	15794.6	9769.96	14886.5
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	EGALCEENMR	EGALC(UniMod:4)EENMR	2	EGALC(UniMod:4)EENMR2	142824	131254	138015
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	EGALDDTR	EGALDDTR	1	EGALDDTR1	10251.5		8331.19
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	EGALDDTR	EGALDDTR	2	EGALDDTR2	5.80931e+06	5.61858e+06	5.8235e+06
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	EGALDDTRDSEMK	EGALDDTRDSEMK	2	EGALDDTRDSEMK2	236094	247954	249981
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	EGALDDTRDSEMK	EGALDDTRDSEMK	3	EGALDDTRDSEMK3	55006.4	57753.6	46103.2
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	EGALDDTRDSEMKLK	EGALDDTRDSEMKLK	3	EGALDDTRDSEMKLK3	7083.26	9391.21	6818.36
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	EGALDDTRDSEMKLK	EGALDDTRDSEMKLK	4	EGALDDTRDSEMKLK4	4263.73	6823.89	7390.98
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	EGALDLSGLR	EGALDLSGLR	2	EGALDLSGLR2	183746	199588	209810
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	EGALTAFR	EGALTAFR	2	EGALTAFR2	104613	99835.4	98084.7
A0A8J8XD91	A0A8J8XD91	A0A8J8XD91_RAT	Timm17b	Translocase of inner mitochondrial membrane 17b	1	EGAPAPGYPNYQQYH	EGAPAPGYPNYQQYH	2	EGAPAPGYPNYQQYH2	6902.05	8469.27	4276.84
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	EGAQYLMQAAGLGR	EGAQYLMQAAGLGR	2	EGAQYLMQAAGLGR2	54517.9	62571	57859.6
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	EGAQYLMQAAGLGR	EGAQYLMQAAGLGR	3	EGAQYLMQAAGLGR3	6177.64	4093.93	8488.32
D4ABP9	D4ABP9	FBX3_RAT	Fbxo3	F-box only protein 3	1	EGAREEDLDAVEAQIGCK	EGAREEDLDAVEAQIGC(UniMod:4)K	3	EGAREEDLDAVEAQIGC(UniMod:4)K3	1344.12	1334.66	1682.78
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	EGASEEETNLSK	EGASEEETNLSK	2	EGASEEETNLSK2	204277	165046	156852
Q02253	Q02253	MMSA_RAT	Aldh6a1	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial	1	EGASILLDGR	EGASILLDGR	2	EGASILLDGR2	46945.8	49074.7	54647.4
Q02253	Q02253	MMSA_RAT	Aldh6a1	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial	1	EGASILLDGRK	EGASILLDGRK	3	EGASILLDGRK3	9206.34	13885.8	9880.2
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	EGASSSEPNVSDSNAESTAK	EGASSSEPNVSDSNAESTAK	3	EGASSSEPNVSDSNAESTAK3	1359.58		
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	EGATLVCGGNQVPR	EGATLVC(UniMod:4)GGNQVPR	2	EGATLVC(UniMod:4)GGNQVPR2	5911.4	11268	7957.8
D4A1Y5	D4A1Y5	D4A1Y5_RAT	Mthfd2	methenyltetrahydrofolate cyclohydrolase	1	EGATVIDVGINR	EGATVIDVGINR	2	EGATVIDVGINR2	44220.9	35872.8	31523.5
Q6AY23	Q6AY23	P5CR2_RAT	Pycr2	Pyrroline-5-carboxylate reductase 2	1	EGATVYATGTHALVEDGK	EGATVYATGTHALVEDGK	2	EGATVYATGTHALVEDGK2		4059.71	1609.42
Q6AY23	Q6AY23	P5CR2_RAT	Pycr2	Pyrroline-5-carboxylate reductase 2	1	EGATVYATGTHALVEDGK	EGATVYATGTHALVEDGK	3	EGATVYATGTHALVEDGK3	27898.6	14187.5	42800.3
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	EGAVAALR	EGAVAALR	2	EGAVAALR2	27315.2	22597.5	20022.3
Q6AYS7	Q6AYS7	ACY1A_RAT	Acy1a	Aminoacylase-1A	1	EGAVTSVNLTK	EGAVTSVNLTK	2	EGAVTSVNLTK2	1162.67	1522.86	1607.25
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	EGCEPMR	EGC(UniMod:4)EPMR	2	EGC(UniMod:4)EPMR2	18543.8		17102.7
P58751	P58751	RELN_RAT	Reln	Reelin	1	EGCFPASAGK	EGC(UniMod:4)FPASAGK	2	EGC(UniMod:4)FPASAGK2	135197	154397	141731
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	EGCGDDNVCNSNLK	EGC(UniMod:4)GDDNVC(UniMod:4)NSNLK	2	EGC(UniMod:4)GDDNVC(UniMod:4)NSNLK2	202764	188042	208944
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	EGCGDDNVCNSNLK	EGC(UniMod:4)GDDNVC(UniMod:4)NSNLK	3	EGC(UniMod:4)GDDNVC(UniMod:4)NSNLK3	3964.68	3499.86	4897.64
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	EGCGPQLR	EGC(UniMod:4)GPQLR	2	EGC(UniMod:4)GPQLR2	12112	9840.47	8152.77
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	EGCPSPPGQTNK	EGC(UniMod:4)PSPPGQTNK	2	EGC(UniMod:4)PSPPGQTNK2		65832.5	
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	EGCTVSPETISLNVK	EGC(UniMod:4)TVSPETISLNVK	2	EGC(UniMod:4)TVSPETISLNVK2	154964	150982	146366
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	EGCYGDKDEFPGVR	EGC(UniMod:4)YGDKDEFPGVR	3	EGC(UniMod:4)YGDKDEFPGVR3	22909.6	25043.3	32640.8
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	EGCYGDMMGK	EGC(UniMod:4)YGDMMGK	2	EGC(UniMod:4)YGDMMGK2	17103.8	12267	10352.1
P15473	P15473	IBP3_RAT	Igfbp3	Insulin-like growth factor-binding protein 3	1	EGDACGVYTER	EGDAC(UniMod:4)GVYTER	2	EGDAC(UniMod:4)GVYTER2	137310	147458	137206
Q6AYP5	Q6AYP5	CADM1_RAT	Cadm1	Cell adhesion molecule 1	1	EGDAFELTCEATGKPQPVMVTWVR	EGDAFELTC(UniMod:4)EATGKPQPVMVTWVR	3	EGDAFELTC(UniMod:4)EATGKPQPVMVTWVR3	46974.1	34500.8	29533.2
Q9JHW1	Q9JHW1	CBPD_RAT	Cpd	Carboxypeptidase D	1	EGDCGLGDSGPPGTSGR	EGDC(UniMod:4)GLGDSGPPGTSGR	2	EGDC(UniMod:4)GLGDSGPPGTSGR2	6053.99	2937.23	2464.22
M0R915	M0R915;A0A8I6GLQ4	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	0	EGDDPIEDHTK	EGDDPIEDHTK	3	EGDDPIEDHTK3	18671.2	20344.1	12433.6
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	EGDFLLR	EGDFLLR	2	EGDFLLR2	76110.4	64897.5	66025.5
F1LVL2	F1LVL2	F1LVL2_RAT	Icoslg	Inducible T-cell co-stimulator ligand	1	EGDFSLHLQNVTPQDTQEFK	EGDFSLHLQNVTPQDTQEFK	3	EGDFSLHLQNVTPQDTQEFK3	8872.73	11120.4	8225.29
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	EGDGGYPVTISDPHLPVSEER	EGDGGYPVTISDPHLPVSEER	3	EGDGGYPVTISDPHLPVSEER3	119333	129031	153628
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	EGDGWVYHKPLWK	EGDGWVYHKPLWK	3	EGDGWVYHKPLWK3	4952.39	7864.65	5625.28
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	EGDGWVYHKPLWK	EGDGWVYHKPLWK	4	EGDGWVYHKPLWK4	8604.24	12853.8	8625.64
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	EGDIVKR	EGDIVKR	2	EGDIVKR2	71962.3		24880.9
Q925Q9	Q925Q9	SH3K1_RAT	Sh3kbp1	SH3 domain-containing kinase-binding protein 1	1	EGDIVTLINK	EGDIVTLINK	2	EGDIVTLINK2	24541.8	19970.9	22525.4
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	EGDLLFTVAK	EGDLLFTVAK	2	EGDLLFTVAK2	74819.7	74952.9	71390.1
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	EGDLLFTVAKDPIVNVWYSVNGER	EGDLLFTVAKDPIVNVWYSVNGER	3	EGDLLFTVAKDPIVNVWYSVNGER3	10109.1	7107.1	8091.4
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	EGDLLTK	EGDLLTK	2	EGDLLTK2	114811	141472	120695
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	EGDLPQVER	EGDLPQVER	2	EGDLPQVER2	43206.9	36496.1	31705.2
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	EGDLTHFNQK	EGDLTHFNQK	2	EGDLTHFNQK2	5926.69	4289.89	9193.68
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	EGDLTHFNQK	EGDLTHFNQK	3	EGDLTHFNQK3	81300.1	83220.1	82521.4
Q71RP1	Q71RP1	HPSE_RAT	Hpse	Heparanase	1	EGDLTLYVLNLHNVTK	EGDLTLYVLNLHNVTK	3	EGDLTLYVLNLHNVTK3	2253.81		
A0A8I5ZQG6	A0A8I5ZQG6	A0A8I5ZQG6_RAT	Sez6l2	Seizure related 6 homolog like 2	1	EGDMLTLFDGDGPSAR	EGDMLTLFDGDGPSAR	2	EGDMLTLFDGDGPSAR2	10295.3	14048.2	11434
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	EGDNAGLLHWNSR	EGDNAGLLHWNSR	3	EGDNAGLLHWNSR3	9351.25	11249.4	16061.8
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	EGDPAIYAER	EGDPAIYAER	2	EGDPAIYAER2	173562	180887	167214
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	EGDPATINAATEIDAPR	EGDPATINAATEIDAPR	2	EGDPATINAATEIDAPR2	83264.5	69915.5	89331.5
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	EGDPATINAATEIDAPR	EGDPATINAATEIDAPR	3	EGDPATINAATEIDAPR3	19396.5	15506.4	22672.6
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	EGDPENTLLALK	EGDPENTLLALK	2	EGDPENTLLALK2	76254.6	73618.3	65823.5
A0A0G2JUU7	A0A0G2JUU7	A0A0G2JUU7_RAT	Tubgcp3	Gamma-tubulin complex component	1	EGDPGGTSEVTEAALVR	EGDPGGTSEVTEAALVR	2	EGDPGGTSEVTEAALVR2	5971.62	10318.2	1768.49
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	EGDQFSSHLINLLNPK	EGDQFSSHLINLLNPK	3	EGDQFSSHLINLLNPK3	10129.3	9782.75	
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	EGDQLVVGPTDDGCFLELR	EGDQLVVGPTDDGC(UniMod:4)FLELR	3	EGDQLVVGPTDDGC(UniMod:4)FLELR3	8733.21	5379.23	6916.66
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	EGDRLDYGDVIPMAEAAGIIR	EGDRLDYGDVIPMAEAAGIIR	3	EGDRLDYGDVIPMAEAAGIIR3	57797.9	53063.3	61784.2
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	EGDSFNTQCLK	EGDSFNTQC(UniMod:4)LK	2	EGDSFNTQC(UniMod:4)LK2	25607.2	22746.5	20873.2
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	EGDTDCFSK	EGDTDC(UniMod:4)FSK	2	EGDTDC(UniMod:4)FSK2	38291.8	33449.7	32881
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	EGDTIIVPGVEGPIVTQIR	EGDTIIVPGVEGPIVTQIR	3	EGDTIIVPGVEGPIVTQIR3	6285.75	9492.66	4393.85
M0R8A3	M0R8A3	M0R8A3_RAT	Gp6	Glycoprotein 6 (platelet)	1	EGDTRPYK	EGDTRPYK	2	EGDTRPYK2			4538.87
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	EGDTVIISCTCGSVPEIWIILK	EGDTVIISC(UniMod:4)TC(UniMod:4)GSVPEIWIILK	3	EGDTVIISC(UniMod:4)TC(UniMod:4)GSVPEIWIILK3	4632.56		
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	EGDTVIISCTCGSVPEIWIILKK	EGDTVIISC(UniMod:4)TC(UniMod:4)GSVPEIWIILKK	3	EGDTVIISC(UniMod:4)TC(UniMod:4)GSVPEIWIILKK3	14376.5	11027.1	
A0A8I6A9E8	A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	1	EGDVGSLVYVMEDGK	EGDVGSLVYVMEDGK	2	EGDVGSLVYVMEDGK2	4924.79	8742.2	6758.5
Q7TS56	Q7TS56	CBR4_RAT	Cbr4	3-oxoacyl-[acyl-carrier-protein] reductase	1	EGDVHSTFEEMEK	EGDVHSTFEEMEK	3	EGDVHSTFEEMEK3		4778.01	2253.18
D4A0T0	D4A0T0	D4A0T0_RAT	Ndufb10	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10	1	EGDVICIYEAEMQWR	EGDVIC(UniMod:4)IYEAEMQWR	2	EGDVIC(UniMod:4)IYEAEMQWR2	10664.4	10460.2	7830.9
P62859	P62859	RS28_RAT	Rps28	Small ribosomal subunit protein eS28	1	EGDVLTLLESER	EGDVLTLLESER	2	EGDVLTLLESER2	26428.8	27214.7	23916.2
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	EGDVVNPASSDALSTK	EGDVVNPASSDALSTK	2	EGDVVNPASSDALSTK2	384386	474208	423639
B2RYD7	B2RYD7	B2RYD7_RAT	Stt3b	dolichyl-diphosphooligosaccharide--protein glycotransferase	1	EGDYFTQQGEFR	EGDYFTQQGEFR	2	EGDYFTQQGEFR2	58282.1	75234.1	72040
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	EGDYVLFHHEGGVDVGDVDTK	EGDYVLFHHEGGVDVGDVDTK	4	EGDYVLFHHEGGVDVGDVDTK4	4610.76	7867.8	7290.07
P23965	P23965	ECI1_RAT	Eci1	Enoyl-CoA delta isomerase 1, mitochondrial	1	EGEAGIAVMK	EGEAGIAVMK	2	EGEAGIAVMK2	116621	96450.9	123580
B1WC06	B1WC06	B1WC06_RAT	Mon1a	Vacuolar fusion protein MON1 homolog	1	EGEAWTPVCLPK	EGEAWTPVC(UniMod:4)LPK	2	EGEAWTPVC(UniMod:4)LPK2	4204.23	5371.42	4342.82
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	EGEDAVIVCDVVSSLPPTIIWK	EGEDAVIVC(UniMod:4)DVVSSLPPTIIWK	3	EGEDAVIVC(UniMod:4)DVVSSLPPTIIWK3	110639	117603	103430
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	EGEDAVIVCDVVSSLPPTIIWK	EGEDAVIVC(UniMod:4)DVVSSLPPTIIWK	4	EGEDAVIVC(UniMod:4)DVVSSLPPTIIWK4	13657.5	19966.1	17348.3
Q63692	Q63692	CDC37_RAT	Cdc37	Hsp90 co-chaperone Cdc37	1	EGEEAGPGDPLLEAVPK	EGEEAGPGDPLLEAVPK	2	EGEEAGPGDPLLEAVPK2	55954.9	55024.1	64417.9
Q63692	Q63692	CDC37_RAT	Cdc37	Hsp90 co-chaperone Cdc37	1	EGEEAGPGDPLLEAVPK	EGEEAGPGDPLLEAVPK	3	EGEEAGPGDPLLEAVPK3	5832.51	7262.42	8729.49
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	EGEEPGPDSENSQENLPLR	EGEEPGPDSENSQENLPLR	3	EGEEPGPDSENSQENLPLR3			1848.34
P70580	P70580;A0A8I6AGW6	PGRC1_RAT	Pgrmc1	Membrane-associated progesterone receptor component 1	0	EGEEPTVYSDDEEPK	EGEEPTVYSDDEEPK	2	EGEEPTVYSDDEEPK2	9847.93	5808.42	10612.8
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	EGEEVMFK	EGEEVMFK	2	EGEEVMFK2	154711	174826	153958
D3ZXI3	D3ZXI3	D3ZXI3_RAT	Notum	NOTUM, palmitoleoyl-protein carboxylesterase	1	EGEEWNCFFGYK	EGEEWNC(UniMod:4)FFGYK	2	EGEEWNC(UniMod:4)FFGYK2	5282.53	7076.14	2312.16
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	EGEFFSAFK	EGEFFSAFK	2	EGEFFSAFK2	95294.7	89013.4	92572.5
F1LS35	F1LS35	F1LS35_RAT	Hps5	Hermansky-Pudlak syndrome 5 protein homolog	1	EGEFGACFFPGR	EGEFGAC(UniMod:4)FFPGR	2	EGEFGAC(UniMod:4)FFPGR2	6266.55		
P48548	P48548	KCNJ5_RAT	Kcnj5	G protein-activated inward rectifier potassium channel 4	1	EGEFIPLNQTDINVGFDTGDDR	EGEFIPLNQTDINVGFDTGDDR	3	EGEFIPLNQTDINVGFDTGDDR3	4743.75	3820.85	2711.28
Q6AYD3	Q6AYD3	PA2G4_RAT	Pa2g4	Proliferation-associated protein 2G4	1	EGEFVAQFK	EGEFVAQFK	2	EGEFVAQFK2	14951.4	13783.9	18151.9
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	EGEGGAGAPDSSSFSPK	EGEGGAGAPDSSSFSPK	2	EGEGGAGAPDSSSFSPK2	3328.28	5065.77	
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	EGEGIEECSGTEVK	EGEGIEEC(UniMod:4)SGTEVK	2	EGEGIEEC(UniMod:4)SGTEVK2	5116.74	4271.36	
P19511	P19511	AT5F1_RAT	Atp5pb	ATP synthase F(0) complex subunit B1, mitochondrial	1	EGEHMINWVEK	EGEHMINWVEK	2	EGEHMINWVEK2	16715.1	7292.79	14815
P19511	P19511	AT5F1_RAT	Atp5pb	ATP synthase F(0) complex subunit B1, mitochondrial	1	EGEHMINWVEK	EGEHMINWVEK	3	EGEHMINWVEK3	175090	170234	169152
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	EGEHVIDQGDDGDNFYVIDR	EGEHVIDQGDDGDNFYVIDR	3	EGEHVIDQGDDGDNFYVIDR3	778771	778342	783962
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	EGEIAIHNSDGQQATILK	EGEIAIHNSDGQQATILK	3	EGEIAIHNSDGQQATILK3	3613.35	3932.87	4697.37
Q62871	Q62871	DC1I2_RAT	Dync1i2	Cytoplasmic dynein 1 intermediate chain 2	1	EGEIQAGAK	EGEIQAGAK	2	EGEIQAGAK2	59578.4	52042.4	56361.2
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	EGEIQLDLHSCPKPIVFIIHSFLSAK	EGEIQLDLHSC(UniMod:4)PKPIVFIIHSFLSAK	4	EGEIQLDLHSC(UniMod:4)PKPIVFIIHSFLSAK4	11024.8	11826.8	6908.06
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	EGEISHLQLEISNLEK	EGEISHLQLEISNLEK	3	EGEISHLQLEISNLEK3	2633.72	4257.04	
Q9QXQ7	Q9QXQ7;B1WBR9	WNT5A_RAT	Wnt5a	Protein Wnt-5a	0	EGELSTCGCSR	EGELSTC(UniMod:4)GC(UniMod:4)SR	2	EGELSTC(UniMod:4)GC(UniMod:4)SR2	2961.52		
P21670	P21670	PSA4_RAT	Psma4	Proteasome subunit alpha type-4	1	EGEMTLK	EGEMTLK	1	EGEMTLK1	35263.7	37673.3	47068.3
P21670	P21670	PSA4_RAT	Psma4	Proteasome subunit alpha type-4	1	EGEMTLK	EGEMTLK	2	EGEMTLK2	1.27701e+06	1.39673e+06	1.65497e+06
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	EGEPFELR	EGEPFELR	2	EGEPFELR2	30416	27013.3	37744.3
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	EGEPIGTNVISIEAASPR	EGEPIGTNVISIEAASPR	2	EGEPIGTNVISIEAASPR2	2138.62		
D4A7F6	D4A7F6	D4A7F6_RAT	Colec10	Collectin subfamily member 10	1	EGEPSDPYGHEDCVEMLSSGR	EGEPSDPYGHEDC(UniMod:4)VEMLSSGR	3	EGEPSDPYGHEDC(UniMod:4)VEMLSSGR3	44152	35232.8	23882.6
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	EGEQHVDDVSSALK	EGEQHVDDVSSALK	2	EGEQHVDDVSSALK2	3725.01	524.532	
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	EGEQHVDDVSSALK	EGEQHVDDVSSALK	3	EGEQHVDDVSSALK3	18100.6	13567.7	26568.8
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	EGEQHVDDVSSALKR	EGEQHVDDVSSALKR	3	EGEQHVDDVSSALKR3	5026.16	5815.91	3546.19
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	EGEQHVDDVSSALKR	EGEQHVDDVSSALKR	4	EGEQHVDDVSSALKR4	6608.86	5996.15	3533.54
D4A0T0	D4A0T0	D4A0T0_RAT	Ndufb10	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10	1	EGESALQNCAK	EGESALQNC(UniMod:4)AK	2	EGESALQNC(UniMod:4)AK2	13550.8	10997.7	5554.74
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	EGESSAENETK	EGESSAENETK	2	EGESSAENETK2			94986.3
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	EGESSGSQEDQLCTALVNQLNR	EGESSGSQEDQLC(UniMod:4)TALVNQLNR	3	EGESSGSQEDQLC(UniMod:4)TALVNQLNR3	5538.34	4361.96	9419.69
A0A8I6AEZ7	A0A8I6AEZ7	A0A8I6AEZ7_RAT	Crlf3	Cytokine receptor-like factor 3	1	EGETAILGGIEEQNDK	EGETAILGGIEEQNDK	2	EGETAILGGIEEQNDK2	76433.5	72618.1	66406.3
A0A8I6AEZ7	A0A8I6AEZ7	A0A8I6AEZ7_RAT	Crlf3	Cytokine receptor-like factor 3	1	EGETAILGGIEEQNDK	EGETAILGGIEEQNDK	3	EGETAILGGIEEQNDK3	13876.3	15767.6	11299.3
Q5FWY5	Q5FWY5	AIP_RAT	Aip	AH receptor-interacting protein	1	EGETAQFLCDVK	EGETAQFLC(UniMod:4)DVK	2	EGETAQFLC(UniMod:4)DVK2	5809.9	8681.72	4796.23
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	EGETCGAEDNDTCGVSLYK	EGETC(UniMod:4)GAEDNDTC(UniMod:4)GVSLYK	3	EGETC(UniMod:4)GAEDNDTC(UniMod:4)GVSLYK3	11127.7	12506.4	14585
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	EGETLDQEAR	EGETLDQEAR	2	EGETLDQEAR2	8883.49	14184.2	7004.34
D3ZF32	D3ZF32	D3ZF32_RAT	Treml2	Triggering receptor expressed on myeloid cells-like 2	1	EGETLSVQCSYK	EGETLSVQC(UniMod:4)SYK	2	EGETLSVQC(UniMod:4)SYK2	11871.6	17503.1	16563.8
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	EGETPDEK	EGETPDEK	2	EGETPDEK2			5288.77
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	EGETPDEKESGDK	EGETPDEKESGDK	2	EGETPDEKESGDK2			8283.14
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	EGETPLLTASAR	EGETPLLTASAR	2	EGETPLLTASAR2	13336.3	18726.2	8267.2
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	EGETVTEVIHGEPVIK	EGETVTEVIHGEPVIK	3	EGETVTEVIHGEPVIK3	50092.2	45189.6	30669.3
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	EGETVTEVIHGEPVIKK	EGETVTEVIHGEPVIKK	4	EGETVTEVIHGEPVIKK4	4495.4	9596.98	5999.79
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	EGETYYDVVAVVDPVTR	EGETYYDVVAVVDPVTR	2	EGETYYDVVAVVDPVTR2	32748.4	33722.5	25089.1
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	EGETYYDVVAVVDPVTR	EGETYYDVVAVVDPVTR	3	EGETYYDVVAVVDPVTR3	36929.1	49039	34828.7
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	EGEVEVLK	EGEVEVLK	1	EGEVEVLK1	2032.29	2574.47	1376.21
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	EGEVEVLK	EGEVEVLK	2	EGEVEVLK2	364937	433557	390027
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	EGEVLYIIEEDK	EGEVLYIIEEDK	2	EGEVLYIIEEDK2	259265	258860	245595
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	EGEVLYIIEEDK	EGEVLYIIEEDK	3	EGEVLYIIEEDK3	10770.2	8232.16	10389.7
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	EGEVLYIIEEDKGDGWTR	EGEVLYIIEEDKGDGWTR	3	EGEVLYIIEEDKGDGWTR3	41509.8	41036	34607
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	EGEVTASHGLK	EGEVTASHGLK	2	EGEVTASHGLK2	5453.42	9365.24	2436.97
A0A8I5Y176	A0A8I5Y176	A0A8I5Y176_RAT	Ranbp9	RAN binding protein 9	1	EGEWQTMIQK	EGEWQTMIQK	2	EGEWQTMIQK2		4500.99	
D4A2N2	D4A2N2	D4A2N2_RAT	Inpp5b	phosphoinositide 5-phosphatase	1	EGEYTYIQNFR	EGEYTYIQNFR	2	EGEYTYIQNFR2	7452.57	4255.2	6013.53
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	EGEYVVVGTNK	EGEYVVVGTNK	2	EGEYVVVGTNK2	7550.58	11412.3	15025.9
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	EGFCQLLQQMK	EGFC(UniMod:4)QLLQQMK	2	EGFC(UniMod:4)QLLQQMK2	12099.3	7695.76	11986.7
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	EGFDFGVR	EGFDFGVR	2	EGFDFGVR2	21474.9	20541.3	24660.3
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	EGFDPSVVKDPLFYLDAR	EGFDPSVVKDPLFYLDAR	3	EGFDPSVVKDPLFYLDAR3	13233.3	12391.2	9181.81
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	EGFDSISSSSK	EGFDSISSSSK	2	EGFDSISSSSK2	16258.9	18113.4	10048.1
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	EGFEGSACQCQR	EGFEGSAC(UniMod:4)QC(UniMod:4)QR	2	EGFEGSAC(UniMod:4)QC(UniMod:4)QR2	67486.7	50835.6	51876.2
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	EGFESPENK	EGFESPENK	2	EGFESPENK2	26859	38150.6	22613.3
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	EGFFELIPQDLIK	EGFFELIPQDLIK	2	EGFFELIPQDLIK2	252795	180933	277797
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	EGFFELIPQDLIK	EGFFELIPQDLIK	3	EGFFELIPQDLIK3	6496.55	2758.87	9565.68
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	EGFFGNPLAPNPADK	EGFFGNPLAPNPADK	2	EGFFGNPLAPNPADK2	198996	217972	221422
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	EGFGHLSPTGTTEFWLGNEK	EGFGHLSPTGTTEFWLGNEK	3	EGFGHLSPTGTTEFWLGNEK3	1.03899e+07	110262	1.04386e+07
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	EGFGHLSPTGTTEFWLGNEK	EGFGHLSPTGTTEFWLGNEK	4	EGFGHLSPTGTTEFWLGNEK4	73758.2	61935.9	62177.9
F7FLB2	F7FLB2	F7FLB2_RAT	Pgm2	phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	1	EGFHFEETLTGFK	EGFHFEETLTGFK	3	EGFHFEETLTGFK3	13656.5	14835	9293.39
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	EGFIPSNYVAK	EGFIPSNYVAK	2	EGFIPSNYVAK2	595566	497426	587798
D3ZL11	D3ZL11	D3ZL11_RAT	Rbsn	Rabenosyn, RAB effector	1	EGFLCPLCLK	EGFLC(UniMod:4)PLC(UniMod:4)LK	2	EGFLC(UniMod:4)PLC(UniMod:4)LK2	12030.1	16545.8	7393.79
A0A0G2JTG3	A0A0G2JTG3	A0A0G2JTG3_RAT	Susd1	Sushi domain containing 1	1	EGFLSISGDR	EGFLSISGDR	2	EGFLSISGDR2	52721.8	38290.4	51783.9
Q63372	Q63372	NRX1A_RAT	Nrxn1	Neurexin-1	1	EGFQGCLASVDLNGR	EGFQGC(UniMod:4)LASVDLNGR	2	EGFQGC(UniMod:4)LASVDLNGR2	2926.29	6492.88	1323.16
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	EGFSIPEGAHMQVLPSGQLR	EGFSIPEGAHMQVLPSGQLR	3	EGFSIPEGAHMQVLPSGQLR3	10027.9		8835.75
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	EGFTQASLGLLANQR	EGFTQASLGLLANQR	2	EGFTQASLGLLANQR2	10160.3	10461.1	9610.32
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	EGFTQASLGLLANQR	EGFTQASLGLLANQR	3	EGFTQASLGLLANQR3	5214.23	8935.06	6566.14
D4A781	D4A634;D4A781	D4A781_RAT	Ipo5	Importin 5	0	EGFVEYTEQVVK	EGFVEYTEQVVK	2	EGFVEYTEQVVK2	71836.8	74700.9	67707.3
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	EGFVGNR	EGFVGNR	2	EGFVGNR2	300196	261025	310397
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	EGFVLTAVEGTVGDFK	EGFVLTAVEGTVGDFK	2	EGFVLTAVEGTVGDFK2	10429.6	5258.87	7966.99
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	EGFYDLSAEDPFGCK	EGFYDLSAEDPFGC(UniMod:4)K	2	EGFYDLSAEDPFGC(UniMod:4)K2	46965.8	51291.8	37866.9
D4A3L3	D4A3L3	D4A3L3_RAT	Megf9	Multiple EGF-like-domains 9	1	EGFYQSPDAAR	EGFYQSPDAAR	2	EGFYQSPDAAR2	155348	206846	170002
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	EGGAEESAIR	EGGAEESAIR	2	EGGAEESAIR2	10947.6	15834.1	18996.1
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	EGGAGAVDEDDFIK	EGGAGAVDEDDFIK	2	EGGAGAVDEDDFIK2	26017.3	29156.4	26167.1
P63036	P63036	DNJA1_RAT	Dnaja1	DnaJ homolog subfamily A member 1	1	EGGAGGGFGSPMDIFDMFFGGGGR	EGGAGGGFGSPMDIFDMFFGGGGR	3	EGGAGGGFGSPMDIFDMFFGGGGR3	2964.06		
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	EGGEPITDDSTSLHK	EGGEPITDDSTSLHK	2	EGGEPITDDSTSLHK2	30526.1	35980.5	28377.5
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	EGGEPITDDSTSLHK	EGGEPITDDSTSLHK	3	EGGEPITDDSTSLHK3	321580	322016	366768
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	EGGFIVR	EGGFIVR	2	EGGFIVR2	64838.8	60869.6	73345.8
Q3B7D0	Q3B7D0	HEM6_RAT	Cpox	Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial	1	EGGGGITCVLQDGR	EGGGGITC(UniMod:4)VLQDGR	2	EGGGGITC(UniMod:4)VLQDGR2		3164.84	3662.07
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	EGGIDACK	EGGIDAC(UniMod:4)K	1	EGGIDAC(UniMod:4)K1	5928.2	2340.78	
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	EGGIDACK	EGGIDAC(UniMod:4)K	2	EGGIDAC(UniMod:4)K2	295365	330380	334967
Q63515	Q63515	C4BPB_RAT	C4bpb	C4b-binding protein beta chain	1	EGGITMEELK	EGGITMEELK	2	EGGITMEELK2	8.24306e+06	9.4213e+06	1.0226e+07
Q64542	Q64542	AT2B4_RAT	Atp2b4	Plasma membrane calcium-transporting ATPase 4	1	EGGIVPFK	EGGIVPFK	2	EGGIVPFK2	38390.6	42832.8	29300.7
A0A0G2JT44	A0A0G2JT44	A0A0G2JT44_RAT	Tmc6	Transmembrane channel-like protein	1	EGGLCSPR	EGGLC(UniMod:4)SPR	2	EGGLC(UniMod:4)SPR2	43495.9	53115	44545.1
P35704	P35704	PRDX2_RAT	Prdx2	Peroxiredoxin-2	1	EGGLGPLNIPLLADVTK	EGGLGPLNIPLLADVTK	2	EGGLGPLNIPLLADVTK2	10169.9	10619.9	17206.7
P11348	P11348	DHPR_RAT	Qdpr	Dihydropteridine reductase	1	EGGLLTLAGAK	EGGLLTLAGAK	2	EGGLLTLAGAK2	62260.8	57776.6	52462
F7ETN7	F7ETN7	F7ETN7_RAT	B4galt7	Beta-1,4-galactosyltransferase	1	EGGLNTVR	EGGLNTVR	2	EGGLNTVR2	16840.5	8055.32	15159.7
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	EGGPLPNCFTTPLR	EGGPLPNC(UniMod:4)FTTPLR	2	EGGPLPNC(UniMod:4)FTTPLR2	29906.9	25913.4	28899.4
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	EGGSGSPSFSSPMDIFDMFFGGGGR	EGGSGSPSFSSPMDIFDMFFGGGGR	3	EGGSGSPSFSSPMDIFDMFFGGGGR3		1887.66	
Q6Q0N1	Q6Q0N1	CNDP2_RAT	Cndp2	Cytosolic non-specific dipeptidase	1	EGGSIPVTLTFQEATGK	EGGSIPVTLTFQEATGK	2	EGGSIPVTLTFQEATGK2	22607.7	12635	18360.9
Q32KJ6	Q32KJ6	GALNS_RAT	Galns	N-acetylgalactosamine-6-sulfatase	1	EGGSNGPFLCGK	EGGSNGPFLC(UniMod:4)GK	2	EGGSNGPFLC(UniMod:4)GK2	21077.9	10420.6	8039.04
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	EGGVFTFGAGGYGQLGHNSTSHEINPR	EGGVFTFGAGGYGQLGHNSTSHEINPR	4	EGGVFTFGAGGYGQLGHNSTSHEINPR4	5871.12	7346.54	12732.3
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	EGGVTFTWVEK	EGGVTFTWVEK	2	EGGVTFTWVEK2	45775.2	35299.6	42284.6
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	EGHALQGPSVLK	EGHALQGPSVLK	2	EGHALQGPSVLK2	4012.41	5954.78	5064.14
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	EGHALQGPSVLK	EGHALQGPSVLK	3	EGHALQGPSVLK3	75082.1	88019.9	85508.6
D3ZN06	D3ZN06	D3ZN06_RAT	Cd248	CD248 molecule	1	EGHELEADGISCSPAGAMGAQASQDLR	EGHELEADGISC(UniMod:4)SPAGAMGAQASQDLR	3	EGHELEADGISC(UniMod:4)SPAGAMGAQASQDLR3	10870.8	6277.31	9266.74
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	EGHEVVGVFTIPDKDGK	EGHEVVGVFTIPDKDGK	4	EGHEVVGVFTIPDKDGK4	11023.7	9394.27	5912.1
Q5FVF9	Q5FVF9	BTD_RAT	Btd	Biotinidase	1	EGHLQVCSNSLCCHLLFER	EGHLQVC(UniMod:4)SNSLC(UniMod:4)C(UniMod:4)HLLFER	3	EGHLQVC(UniMod:4)SNSLC(UniMod:4)C(UniMod:4)HLLFER3	3504.25	3088.16	
Q5FVF9	Q5FVF9	BTD_RAT	Btd	Biotinidase	1	EGHLQVCSNSLCCHLLFER	EGHLQVC(UniMod:4)SNSLC(UniMod:4)C(UniMod:4)HLLFER	4	EGHLQVC(UniMod:4)SNSLC(UniMod:4)C(UniMod:4)HLLFER4	4292.68	13656.1	10178
Q5FVF9	Q5FVF9	BTD_RAT	Btd	Biotinidase	1	EGHLQVCSNSLCCHLLFERPALSK	EGHLQVC(UniMod:4)SNSLC(UniMod:4)C(UniMod:4)HLLFERPALSK	4	EGHLQVC(UniMod:4)SNSLC(UniMod:4)C(UniMod:4)HLLFERPALSK4	12206.1	8928.15	13583.2
P24329	P24329	THTR_RAT	Tst	Thiosulfate sulfurtransferase	1	EGHPVTSEPSRPEPAVFK	EGHPVTSEPSRPEPAVFK	3	EGHPVTSEPSRPEPAVFK3	14366.6	8357.64	14660.1
P24329	P24329	THTR_RAT	Tst	Thiosulfate sulfurtransferase	1	EGHPVTSEPSRPEPAVFK	EGHPVTSEPSRPEPAVFK	4	EGHPVTSEPSRPEPAVFK4	54266.5	66518.8	48578.5
A0A8I6GAE6	A0A8I6GAE6	A0A8I6GAE6_RAT	Ddx19b	RNA helicase	1	EGHQVALLSGEMMVEQR	EGHQVALLSGEMMVEQR	3	EGHQVALLSGEMMVEQR3	2959.17	3474.29	2417.24
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	EGHSSSLFGNIK	EGHSSSLFGNIK	3	EGHSSSLFGNIK3	88215.3	86086.9	99426
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	EGHVDTALALLEK	EGHVDTALALLEK	3	EGHVDTALALLEK3	7787.58	9536.07	4021.18
Q5RKI6	Q5RKI6	EIF1A_RAT	Eif1ad	Probable RNA-binding protein EIF1AD	1	EGHWPEAFSEVAEK	EGHWPEAFSEVAEK	3	EGHWPEAFSEVAEK3	6977.77	6710.94	7520.01
Q9WTT7	Q9WTT7	5MP1_RAT	Bzw2	eIF5-mimic protein 1	1	EGIAASFAVK	EGIAASFAVK	2	EGIAASFAVK2	13200.4	18953.7	19384.4
D4A0G9	D4A0G9	D4A0G9_RAT	Ercc6l	ERCC excision repair 6 like, spindle assembly checkpoint helicase	1	EGIAFLYSLYK	EGIAFLYSLYK	2	EGIAFLYSLYK2	5029.08	3650.04	4244.33
P46413	P46413	GSHB_RAT	Gss	Glutathione synthetase	1	EGIAQTVFLGLNR	EGIAQTVFLGLNR	2	EGIAQTVFLGLNR2			5822.4
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	EGICAIGGTSEQSSVGTQHSYSEEEK	EGIC(UniMod:4)AIGGTSEQSSVGTQHSYSEEEK	3	EGIC(UniMod:4)AIGGTSEQSSVGTQHSYSEEEK3	16665.1	13587.1	
Q63598	Q63598	PLST_RAT	Pls3	Plastin-3	1	EGICALGGTSELSSEGTQHSYSEEEK	EGIC(UniMod:4)ALGGTSELSSEGTQHSYSEEEK	3	EGIC(UniMod:4)ALGGTSELSSEGTQHSYSEEEK3	9545.88	13148.3	17865.3
P21913	P21913	SDHB_RAT	Sdhb	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial	1	EGICGSCAMNINGGNTLACTR	EGIC(UniMod:4)GSC(UniMod:4)AMNINGGNTLAC(UniMod:4)TR	3	EGIC(UniMod:4)GSC(UniMod:4)AMNINGGNTLAC(UniMod:4)TR3	7683.02	3646.13	1599.6
P08650	P08650	CO5_RAT	C5	Complement C5	1	EGIDILTHLPK	EGIDILTHLPK	2	EGIDILTHLPK2	68823.2	41832.1	42423.7
P08650	P08650	CO5_RAT	C5	Complement C5	1	EGIDILTHLPK	EGIDILTHLPK	3	EGIDILTHLPK3	804315	645339	633580
F1LPV0	F1LPV0	F1LPV0_RAT	Nars1	asparagine--tRNA ligase	1	EGIDPAPYYWYTDQR	EGIDPAPYYWYTDQR	2	EGIDPAPYYWYTDQR2	8722.28	6387.64	2941.32
P49432	P49432	ODPB_RAT	Pdhb	Pyruvate dehydrogenase E1 component subunit beta, mitochondrial	1	EGIECEVINLR	EGIEC(UniMod:4)EVINLR	2	EGIEC(UniMod:4)EVINLR2	47297.3	52477.1	56223.5
A0A096MKE0	A0A096MKE0	A0A096MKE0_RAT	Asph	Aspartate-beta-hydroxylase	1	EGIESGDPGTDDGR	EGIESGDPGTDDGR	2	EGIESGDPGTDDGR2	14718	9185.64	7485.25
Q63055	Q63055	ARFRP_RAT	Arfrp1	ADP-ribosylation factor-related protein 1	1	EGIEWMVK	EGIEWMVK	2	EGIEWMVK2	8250.24	12239.4	14661.4
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	EGIFAVDTMLK	EGIFAVDTMLK	2	EGIFAVDTMLK2	8495.56	4924.9	5579.91
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	EGIIPANYVQK	EGIIPANYVQK	2	EGIIPANYVQK2	133604	103947	138775
D3ZT64	D3ZT64	D3ZT64_RAT	Atg2a	Autophagy related 2A	1	EGILDTAQTICDVASR	EGILDTAQTIC(UniMod:4)DVASR	2	EGILDTAQTIC(UniMod:4)DVASR2	5240.33	3517.54	1574.58
O35763	O35763	MOES_RAT	Msn	Moesin	1	EGILNDDIYCPPETAVLLASYAVQSK	EGILNDDIYC(UniMod:4)PPETAVLLASYAVQSK	3	EGILNDDIYC(UniMod:4)PPETAVLLASYAVQSK3	11309.8	15083.5	18599.5
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	EGILQEESIYK	EGILQEESIYK	2	EGILQEESIYK2	172809	193301	199312
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	EGILSPSELR	EGILSPSELR	2	EGILSPSELR2	132917	166467	137302
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	EGILSPSELRK	EGILSPSELRK	2	EGILSPSELRK2	13331.3	14108.1	13664.3
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	EGILSPSELRK	EGILSPSELRK	3	EGILSPSELRK3	22933.7	34421.5	52347.8
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	EGIMNPEVGMK	EGIMNPEVGMK	2	EGIMNPEVGMK2	17991.2	12949.6	14570.2
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	EGIPALDNFLDKL	EGIPALDNFLDKL	2	EGIPALDNFLDKL2	39731.5	24810.4	42437.9
Q62751	Q62751	IREB2_RAT	Ireb2	Iron-responsive element-binding protein 2	1	EGIPLIILAGK	EGIPLIILAGK	2	EGIPLIILAGK2	6804.92	9427.26	8095.3
P62986	A0A8I6AN99;P62986;P0CG51;Q63429;A0A8I6A1Y5;P62982;A0A8I6A5Y3	RL40_RAT	Uba52	Ubiquitin-ribosomal protein eL40 fusion protein	0	EGIPPDQQR	EGIPPDQQR	2	EGIPPDQQR2	193652	176579	186483
P18421	P18421	PSB1_RAT	Psmb1	Proteasome subunit beta type-1	1	EGIREETVPLR	EGIREETVPLR	2	EGIREETVPLR2	17112.3	11376.4	13128.9
P18421	P18421	PSB1_RAT	Psmb1	Proteasome subunit beta type-1	1	EGIREETVPLR	EGIREETVPLR	3	EGIREETVPLR3	1.4835e+06	1.52193e+06	1.50609e+06
P18421	P18421	PSB1_RAT	Psmb1	Proteasome subunit beta type-1	1	EGIREETVPLRK	EGIREETVPLRK	3	EGIREETVPLRK3	188259	84075.5	129666
P47197	P47197	AKT2_RAT	Akt2	RAC-beta serine/threonine-protein kinase	1	EGISDGATMK	EGISDGATMK	2	EGISDGATMK2	11517	6625.88	2371.3
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	EGITAIGGTSSISSEGTQHSYSEEEK	EGITAIGGTSSISSEGTQHSYSEEEK	3	EGITAIGGTSSISSEGTQHSYSEEEK3	39913	26256.1	50254.6
Q63484	Q63484	AKT3_RAT	Akt3	RAC-gamma serine/threonine-protein kinase	1	EGITDAATMK	EGITDAATMK	2	EGITDAATMK2	12596.5	15647.5	21764
P97521	P97521	MCAT_RAT	Slc25a20	Mitochondrial carnitine/acylcarnitine carrier protein	1	EGITGLYR	EGITGLYR	2	EGITGLYR2	148122	138392	159363
D3ZW92	D3ZW92	D3ZW92_RAT	Fam78a	Family with sequence similarity 78, member A	1	EGITVIDVK	EGITVIDVK	2	EGITVIDVK2	10238.5	8920.21	11328.8
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	EGIVTTAEQDIK	EGIVTTAEQDIK	2	EGIVTTAEQDIK2	13770.6	10696.7	22756.9
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	EGIVTTAEQDIKEDIAK	EGIVTTAEQDIKEDIAK	3	EGIVTTAEQDIKEDIAK3	44200	25914.5	37347.7
Q8R492	Q8R492	Q8R492_RAT	Fap	Fibroblast activation protein, alpha	1	EGIVVALVDGR	EGIVVALVDGR	2	EGIVVALVDGR2	11740.3	12679.5	7943.86
P51792	P51792	CLCN3_RAT	Clcn3	H(+)/Cl(-) exchange transporter 3	1	EGIYEAHIR	EGIYEAHIR	2	EGIYEAHIR2	1105.09		2138.82
P08649	P08649	CO4_RAT	C4	Complement C4	1	EGKGEMADKVATWLTHQGSFQGGFR	EGKGEMADKVATWLTHQGSFQGGFR	4	EGKGEMADKVATWLTHQGSFQGGFR4	9876.59	10537	18694.2
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	EGLAELYEYK	EGLAELYEYK	2	EGLAELYEYK2	70792.1	56667.3	66182.9
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	EGLAELYEYKK	EGLAELYEYKK	2	EGLAELYEYKK2	4031.39	5086.32	5127.8
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	EGLAELYEYKK	EGLAELYEYKK	3	EGLAELYEYKK3	8878.05	19757.2	22496.2
Q63632	Q63632	S12A4_RAT	Slc12a4	Solute carrier family 12 member 4	1	EGLAHLIQSCGLGGMR	EGLAHLIQSC(UniMod:4)GLGGMR	3	EGLAHLIQSC(UniMod:4)GLGGMR3	5887.39	7071.92	9450.46
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	EGLALPEDSR	EGLALPEDSR	2	EGLALPEDSR2	23413.8	32025.7	30330.2
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	EGLAQQVQQSLEK	EGLAQQVQQSLEK	2	EGLAQQVQQSLEK2	10096.8	7335.89	6065.45
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	EGLDEVAGIINEAK	EGLDEVAGIINEAK	2	EGLDEVAGIINEAK2	79414.8	61624.8	69863.6
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	EGLDEVAGIINEAK	EGLDEVAGIINEAK	3	EGLDEVAGIINEAK3	9679.83	10019.1	8667.9
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	EGLDISHLQGQEELLSSQEK	EGLDISHLQGQEELLSSQEK	3	EGLDISHLQGQEELLSSQEK3	28548.6	31801.8	34977.1
Q6Q0N0	Q6Q0N0	CSTN1_RAT	Clstn1	Calsyntenin-1	1	EGLDLQVPEDGNR	EGLDLQVPEDGNR	2	EGLDLQVPEDGNR2	12697.4	10358.5	15024.9
D4A0T9	D4A0T9	D4A0T9_RAT	Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	1	EGLDVCQALSCHTDPLDQSSCSR	EGLDVC(UniMod:4)QALSC(UniMod:4)HTDPLDQSSC(UniMod:4)SR	3	EGLDVC(UniMod:4)QALSC(UniMod:4)HTDPLDQSSC(UniMod:4)SR3	7766.67	10398.9	4136.5
P34058	A0A8I6GLF3;P82995;P34058;A0A8I5ZQP6;A0A8I5ZRY7	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	EGLELPEDEEEK	EGLELPEDEEEK	2	EGLELPEDEEEK2	2.29903e+06	2.80277e+06	2.6616e+06
P34058	A0A8I6GLF3;P82995;P34058;A0A8I5ZQP6;A0A8I5ZRY7	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	EGLELPEDEEEKK	EGLELPEDEEEKK	2	EGLELPEDEEEKK2	214646	240193	223641
P34058	A0A8I6GLF3;P82995;P34058;A0A8I5ZQP6;A0A8I5ZRY7	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	EGLELPEDEEEKK	EGLELPEDEEEKK	3	EGLELPEDEEEKK3	1.81969e+06	2.09137e+06	2.02984e+06
P34058	A0A8I6GLF3;P82995;P34058;A0A8I5ZQP6;A0A8I5ZRY7	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	EGLELPEDEEEKKK	EGLELPEDEEEKKK	3	EGLELPEDEEEKKK3	22677.7	26335.2	27299.4
P34058	A0A8I6GLF3;P82995;P34058;A0A8I5ZQP6;A0A8I5ZRY7	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	EGLELPEDEEEKKK	EGLELPEDEEEKKK	4	EGLELPEDEEEKKK4	32168.8	49969.6	40089
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	EGLENDLK	EGLENDLK	2	EGLENDLK2	68907.6	90692.7	128416
F1LZJ4	F1LZJ4	F1LZJ4_RAT	Hyi	Putative hydroxypyruvate isomerase	1	EGLEQAVLYAK	EGLEQAVLYAK	2	EGLEQAVLYAK2	7857.87	5212.47	5765.34
Q5BQE6	Q5BQE6	DHC24_RAT	Dhcr24	Delta(24)-sterol reductase	1	EGLEYIPLR	EGLEYIPLR	2	EGLEYIPLR2	53216.1	46377.6	63008.6
Q6IUP3	Q6IUP3	ELP5_RAT	Elp5	Elongator complex protein 5	1	EGLGSDVNSR	EGLGSDVNSR	2	EGLGSDVNSR2	12502.8	11702.1	10781.8
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	EGLGTHSSMILR	EGLGTHSSMILR	3	EGLGTHSSMILR3	13120.7	10820.8	16337.1
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	EGLGVNEVHYVDNQDCIDLIEVK	EGLGVNEVHYVDNQDC(UniMod:4)IDLIEVK	3	EGLGVNEVHYVDNQDC(UniMod:4)IDLIEVK3	3924.28	3470.67	4753.39
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	EGLHYTEVCGYDIASPNAGPLFR	EGLHYTEVC(UniMod:4)GYDIASPNAGPLFR	3	EGLHYTEVC(UniMod:4)GYDIASPNAGPLFR3	49656.6	39577.6	50901.6
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	EGLIVGFIR	EGLIVGFIR	2	EGLIVGFIR2	18014	22140.9	36322
Q704E8	Q704E8	ABCB7_RAT	Abcb7	Iron-sulfur clusters transporter ABCB7, mitochondrial	1	EGLKDVDTRK	EGLKDVDTRK	3	EGLKDVDTRK3	4596.17	13190.2	
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	EGLKECYVFKPK	EGLKEC(UniMod:4)YVFKPK	3	EGLKEC(UniMod:4)YVFKPK3	13928.8	12165.1	14223.5
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	EGLLAEEINDVLER	EGLLAEEINDVLER	2	EGLLAEEINDVLER2	80390.6	112030	91592.1
Q6P0K8	Q6P0K8;Q9WU82	PLAK_RAT	Jup	Junction plakoglobin	0	EGLLAIFK	EGLLAIFK	2	EGLLAIFK2	38286.8	28950.2	34793.5
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	EGLLDVEK	EGLLDVEK	2	EGLLDVEK2	173892	163985	163332
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	EGLLFEGR	EGLLFEGR	2	EGLLFEGR2	280939	231304	232780
Q99JD4	Q99JD4;F1LNQ9	CLAP2_RAT	Clasp2	CLIP-associating protein 2	0	EGLLGLQNLLK	EGLLGLQNLLK	2	EGLLGLQNLLK2	116252	107760	86464.1
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	EGLLHSSHISEELTTTTEIMMGR	EGLLHSSHISEELTTTTEIMMGR	3	EGLLHSSHISEELTTTTEIMMGR3	22113.1	18602.6	20550.1
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	EGLLHSSHISEELTTTTEIMMGR	EGLLHSSHISEELTTTTEIMMGR	4	EGLLHSSHISEELTTTTEIMMGR4	62934.3	48318.5	70117.1
Q9Z1P2	Q9QXQ0;Q8R4I6;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	EGLLLWCQR	EGLLLWC(UniMod:4)QR	2	EGLLLWC(UniMod:4)QR2	3.57284e+06	4.02133e+06	3.72862e+06
A0A0G2JY11	A0A0G2JY11	A0A0G2JY11_RAT	Tspan9	Tetraspanin	1	EGLLLYNTENNVGLK	EGLLLYNTENNVGLK	2	EGLLLYNTENNVGLK2	594559	524653	633362
A0A0G2JY11	A0A0G2JY11	A0A0G2JY11_RAT	Tspan9	Tetraspanin	1	EGLLLYNTENNVGLK	EGLLLYNTENNVGLK	3	EGLLLYNTENNVGLK3	13629.2	14394.9	9447.64
Q63313	Q63313	LBP_RAT	Lbp	Lipopolysaccharide-binding protein	1	EGLLSLQR	EGLLSLQR	2	EGLLSLQR2	92067.2	82201.2	100297
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	EGLMLDSHEELYK	EGLMLDSHEELYK	2	EGLMLDSHEELYK2	9396.21	3346.42	7653.17
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	EGLMLDSHEELYK	EGLMLDSHEELYK	3	EGLMLDSHEELYK3	170703	210848	199798
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	EGLPLMVFANWR	EGLPLMVFANWR	2	EGLPLMVFANWR2	4558.1		6402.36
A0A8I6ASC6	A0A8I6ASC6	A0A8I6ASC6_RAT	Igdcc4	Immunoglobulin superfamily, DCC subclass, member 4	1	EGLPSAPTR	EGLPSAPTR	2	EGLPSAPTR2	31720.6	21233.6	23708.5
F7EMB2	Q7TQ71;F7EMB2	F7EMB2_RAT	Rtraf	RNA transcription, translation and transport factor protein	0	EGLPVALDK	EGLPVALDK	2	EGLPVALDK2	34386.9	24205.4	31687.1
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	EGLQDIVIGIIK	EGLQDIVIGIIK	2	EGLQDIVIGIIK2	145135	136883	141981
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	EGLQDIVIGIIK	EGLQDIVIGIIK	3	EGLQDIVIGIIK3	3060.31	3564.54	5294.22
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	EGLQNMEAR	EGLQNMEAR	2	EGLQNMEAR2	56472.8	74546.2	51412.8
Q3B7T9	Q3B7T9	RFIP1_RAT	Rab11fip1	Rab11 family-interacting protein 1	1	EGLSPANMEVATK	EGLSPANMEVATK	2	EGLSPANMEVATK2	20590.3	12823.4	25163.4
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	EGLTGAGSGPSR	EGLTGAGSGPSR	2	EGLTGAGSGPSR2	802446	811993	829591
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	EGLVMVEVR	EGLVMVEVR	2	EGLVMVEVR2	85003.9	87591.2	63290.2
Q3KR59	Q3KR59	UBP10_RAT	Usp10	Ubiquitin carboxyl-terminal hydrolase 10	1	EGLVPVSEDPVAIK	EGLVPVSEDPVAIK	2	EGLVPVSEDPVAIK2	57300	56543.9	63017.2
P08650	P08650	CO5_RAT	C5	Complement C5	1	EGLVSVMSYR	EGLVSVMSYR	2	EGLVSVMSYR2	1.00838e+06	812411	767647
P07824	P07824	ARGI1_RAT	Arg1	Arginase-1	1	EGLYITEEIYK	EGLYITEEIYK	2	EGLYITEEIYK2	12324.3	7293.29	6521.24
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	EGLYQYK	EGLYQYK	2	EGLYQYK2	110669	108209	103034
P29117	P29117	PPIF_RAT	Ppif	Peptidyl-prolyl cis-trans isomerase F, mitochondrial	1	EGMDVVK	EGMDVVK	1	EGMDVVK1	6319.16	7218.81	7324.69
P29117	P29117	PPIF_RAT	Ppif	Peptidyl-prolyl cis-trans isomerase F, mitochondrial	1	EGMDVVK	EGMDVVK	2	EGMDVVK2	432246	395662	425925
P29117	P29117	PPIF_RAT	Ppif	Peptidyl-prolyl cis-trans isomerase F, mitochondrial	1	EGMDVVKK	EGMDVVKK	2	EGMDVVKK2	14808.3	31169.4	18162.3
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	EGMEIPNLR	EGMEIPNLR	2	EGMEIPNLR2	12614.9	17141.1	5872.93
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	EGMELLAR	EGMELLAR	2	EGMELLAR2	76495.4	85153.5	81951.9
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	EGMGWSYLVFCLK	EGMGWSYLVFC(UniMod:4)LK	2	EGMGWSYLVFC(UniMod:4)LK2	5497.33	4715.73	6712.33
Q63433	Q63433;O08874	PKN1_RAT	Pkn1	Serine/threonine-protein kinase N1	0	EGMGYGDR	EGMGYGDR	2	EGMGYGDR2	16074.2	25601	16122
P20611	P20611	PPAL_RAT	Acp2	Lysosomal acid phosphatase	1	EGMLQHWELGQALR	EGMLQHWELGQALR	3	EGMLQHWELGQALR3	27501.4	25583	28994.2
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EGMQLISEKPETEAVVK	EGMQLISEKPETEAVVK	2	EGMQLISEKPETEAVVK2	18260.6	33275.6	22575.6
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EGMQLISEKPETEAVVK	EGMQLISEKPETEAVVK	3	EGMQLISEKPETEAVVK3	645899	684129	673417
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	EGMQLIYLPPSPLLAESTTPITDIR	EGMQLIYLPPSPLLAESTTPITDIR	3	EGMQLIYLPPSPLLAESTTPITDIR3	6847.86	18236	10512.3
P14604	P14604	ECHM_RAT	Echs1	Enoyl-CoA hydratase, mitochondrial	1	EGMSAFVEK	EGMSAFVEK	2	EGMSAFVEK2	69835.4	71095.7	43755.8
P14604	P14604	ECHM_RAT	Echs1	Enoyl-CoA hydratase, mitochondrial	1	EGMSAFVEKR	EGMSAFVEKR	3	EGMSAFVEKR3	3016.87		2608.55
P10111	P10111;A0A8I6A629	PPIA_RAT	Ppia	Peptidyl-prolyl cis-trans isomerase A	0	EGMSIVEAMER	EGMSIVEAMER	2	EGMSIVEAMER2	778353	834758	828484
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	EGMSPSEKPAWAK	EGMSPSEKPAWAK	2	EGMSPSEKPAWAK2	22702.2	23665.2	20632.2
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	EGMSPSEKPAWAK	EGMSPSEKPAWAK	3	EGMSPSEKPAWAK3	499149	592208	639204
Q641Z2	Q641Z2	PTN9_RAT	Ptpn9	Tyrosine-protein phosphatase non-receptor type 9	1	EGMVPSGHSLLAMDGQ	EGMVPSGHSLLAMDGQ	2	EGMVPSGHSLLAMDGQ2	6053.53	5938.52	5825.72
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	EGNAVAVR	EGNAVAVR	2	EGNAVAVR2	1.32915e+06	1.36751e+06	1.42341e+06
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	EGNDILDEANR	EGNDILDEANR	2	EGNDILDEANR2	31392	40087.8	27625.1
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	EGNDLYHEMIESGVINLK	EGNDLYHEMIESGVINLK	3	EGNDLYHEMIESGVINLK3	387103	331155	379097
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	EGNECLLSK	EGNEC(UniMod:4)LLSK	2	EGNEC(UniMod:4)LLSK2	16645.1	13730.9	22021.1
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	EGNFASTFDK	EGNFASTFDK	2	EGNFASTFDK2	1.14121e+07	1.24242e+07	1.29498e+07
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	EGNFASTFDKK	EGNFASTFDKK	2	EGNFASTFDKK2	209952	218300	257300
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	EGNFASTFDKK	EGNFASTFDKK	3	EGNFASTFDKK3	1.65657e+06	2.04437e+06	2.15252e+06
D4A8N1	D4A8N1	D4A8N1_RAT	Dpm1	Dolichol-phosphate mannosyltransferase subunit 1	1	EGNFDIVSGTR	EGNFDIVSGTR	2	EGNFDIVSGTR2	55562.6	54336.8	59450.4
A0A8I6A8Q1	A0A8I6A8Q1	A0A8I6A8Q1_RAT	A2ml1	Alpha-2-macroglobulin-like 1	1	EGNFYACANFK	EGNFYAC(UniMod:4)ANFK	2	EGNFYAC(UniMod:4)ANFK2	11030	3086.06	8975.06
Q64119	Q64119	MYL6_RAT	Myl6	Myosin light polypeptide 6	1	EGNGTVMGAEIR	EGNGTVMGAEIR	2	EGNGTVMGAEIR2	3.38756e+06	3.37086e+06	3.45625e+06
P02600	P02600;P16409	MYL1_RAT	Myl1	Myosin light chain 1/3, skeletal muscle isoform	0	EGNGTVMGAELR	EGNGTVMGAELR	2	EGNGTVMGAELR2	176083	194565	829877
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	EGNKDVYLSLLR	EGNKDVYLSLLR	3	EGNKDVYLSLLR3	9590.06	9516.57	9061.05
P17105	P17105	IP3KA_RAT	Itpka	Inositol-trisphosphate 3-kinase A	1	EGNWLPAAGSHLQQPR	EGNWLPAAGSHLQQPR	3	EGNWLPAAGSHLQQPR3	20637.9	14824.4	
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	EGPAVVGQFIQDVK	EGPAVVGQFIQDVK	2	EGPAVVGQFIQDVK2	467486	547625	502207
F1LU27	F1LU27	F1LU27_RAT	Focad	Focadhesin	1	EGPEEVQYK	EGPEEVQYK	2	EGPEEVQYK2	7978.74	10365.4	10165.6
Q02356	Q02356;O09178	AMPD2_RAT	Ampd2	AMP deaminase 2	0	EGPEGNDIR	EGPEGNDIR	2	EGPEGNDIR2	96252.4	76316.1	72097.2
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	EGPEGNDIRR	EGPEGNDIRR	2	EGPEGNDIRR2	7226.93		9729.75
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	EGPENTVR	EGPENTVR	2	EGPENTVR2	37723.2	52425.2	51702.1
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	EGPETPLRPR	EGPETPLRPR	3	EGPETPLRPR3	93922.9	83857	111592
A0A0G2K1E1	A0A0G2K1E1	A0A0G2K1E1_RAT	RT1-A1	RT1 class Ia, locus A1	1	EGPEYWER	EGPEYWER	2	EGPEYWER2	1.13929e+06	1.18912e+06	1.29421e+06
P48032	P48032	TIMP3_RAT	Timp3	Metalloproteinase inhibitor 3	1	EGPFGTLVYTIK	EGPFGTLVYTIK	2	EGPFGTLVYTIK2	1.15138e+06	1.10966e+06	1.17911e+06
P48032	P48032	TIMP3_RAT	Timp3	Metalloproteinase inhibitor 3	1	EGPFGTLVYTIK	EGPFGTLVYTIK	3	EGPFGTLVYTIK3	22853.3	30615.3	31335.5
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	EGPGDEDDPLR	EGPGDEDDPLR	2	EGPGDEDDPLR2	2501.87	2476.86	3686.67
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	EGPGDEDDPLRR	EGPGDEDDPLRR	3	EGPGDEDDPLRR3	153956	118634	142363
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	EGPGTGEEGK	EGPGTGEEGK	2	EGPGTGEEGK2			16887.5
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	EGPIEISFPR	EGPIEISFPR	2	EGPIEISFPR2	177376	207862	229879
F1LM66	F1LM66	F1LM66_RAT	Eftud2	116 kDa U5 small nuclear ribonucleoprotein component	1	EGPLCDELIR	EGPLC(UniMod:4)DELIR	2	EGPLC(UniMod:4)DELIR2	22310.5	22821.5	18796.3
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	EGPLLILGR	EGPLLILGR	2	EGPLLILGR2	115975	124934	115317
P27139	P27139	CAH2_RAT	Ca2	Carbonic anhydrase 2	1	EGPLSGSYR	EGPLSGSYR	2	EGPLSGSYR2	58868.8	56038.9	53231.4
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	EGPNFITMEGTVSDHIER	EGPNFITMEGTVSDHIER	3	EGPNFITMEGTVSDHIER3	8900.97	26626.9	
Q9WTQ2	Q9WTQ2	PODXL_RAT	Podxl	Podocalyxin	1	EGPPEVNEDR	EGPPEVNEDR	2	EGPPEVNEDR2	5065.49	6438.47	5637.93
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	EGPPPAVDGMHVWK	EGPPPAVDGMHVWK	2	EGPPPAVDGMHVWK2	7405.83		5987.8
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	EGPPPAVDGMHVWK	EGPPPAVDGMHVWK	3	EGPPPAVDGMHVWK3	71310.6	75857.8	62002.3
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	EGPSLAELLANVASSILSHIK	EGPSLAELLANVASSILSHIK	3	EGPSLAELLANVASSILSHIK3	1383.83	1790.4	
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	EGPTICGLLSAPDILVCHINDWR	EGPTIC(UniMod:4)GLLSAPDILVC(UniMod:4)HINDWR	3	EGPTIC(UniMod:4)GLLSAPDILVC(UniMod:4)HINDWR3	6455.34	8575.4	1268.21
Q4KLZ6	Q4KLZ6	TKFC_RAT	Tkfc	Triokinase/FMN cyclase	1	EGPTPASPAQVLSK	EGPTPASPAQVLSK	2	EGPTPASPAQVLSK2	8171.19	8597.4	4180.4
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	EGPVTSPFR	EGPVTSPFR	2	EGPVTSPFR2	9820.82	13128.6	6004.08
A0A8I6AEI1	A0A8I6AEI1	A0A8I6AEI1_RAT	Hps1	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1	1	EGQEAGSALR	EGQEAGSALR	2	EGQEAGSALR2	97059.8	125686	77644.2
Q00438	Q00438;Q9Z118	PTBP1_RAT	Ptbp1	Polypyrimidine tract-binding protein 1	0	EGQEDQGLTK	EGQEDQGLTK	2	EGQEDQGLTK2	52945.8	61194.1	
B4F7E7	B4F7E7	PALS1_RAT	Pals1	Protein PALS1	1	EGQELTALLNAPHIQALLLAHDK	EGQELTALLNAPHIQALLLAHDK	4	EGQELTALLNAPHIQALLLAHDK4	9458.78	10388.6	3684.1
Q5M7W6	Q5M7W6	F234A_RAT	Fam234a	Protein FAM234A	1	EGQEVSGALYSGSTGYQIGHR	EGQEVSGALYSGSTGYQIGHR	3	EGQEVSGALYSGSTGYQIGHR3			2758.38
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	EGQFKDIITK	EGQFKDIITK	3	EGQFKDIITK3	15689.8	22109.3	19554.1
A0A0G2K618	A0A0G2K618	A0A0G2K618_RAT	Large1	LARGE xylosyl- and glucuronyltransferase 1	1	EGQFYPVNFLR	EGQFYPVNFLR	2	EGQFYPVNFLR2	13644.2	14342.2	9445.31
Q9Z1A5	Q9Z1A5	ULA1_RAT	Nae1	NEDD8-activating enzyme E1 regulatory subunit	1	EGQGNLPVR	EGQGNLPVR	2	EGQGNLPVR2	27697.6	22556.2	25937.1
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	EGQLTSMPR	EGQLTSMPR	2	EGQLTSMPR2	19020.1	28853.7	37582.9
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	EGQNFIFR	EGQNFIFR	2	EGQNFIFR2	21048.1	19410.9	29342.7
Q9WTR7	Q9WTR7	SC11C_RAT	Sec11c	Signal peptidase complex catalytic subunit SEC11C	1	EGQNWLEK	EGQNWLEK	2	EGQNWLEK2	26127	22072.8	19901.4
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	EGQPICSQR	EGQPIC(UniMod:4)SQR	2	EGQPIC(UniMod:4)SQR2	14845.2	1.09151e+07	9651.57
Q5PQS6	Q5PQS6	SMG9_RAT	Smg9	Nonsense-mediated mRNA decay factor SMG9	1	EGQRPTQPVYQIQNR	EGQRPTQPVYQIQNR	3	EGQRPTQPVYQIQNR3	8801.2	9386.29	6893.44
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	EGQVFCSK	EGQVFC(UniMod:4)SK	2	EGQVFC(UniMod:4)SK2	32771.4	32213.5	23533.8
Q923M1	Q923M1	MSRA_RAT	Msra	Mitochondrial peptide methionine sulfoxide reductase	1	EGQVFYYAEDYHQQYLSK	EGQVFYYAEDYHQQYLSK	3	EGQVFYYAEDYHQQYLSK3	4094.24	2098.3	6467.54
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	EGQVLECSLINSIR	EGQVLEC(UniMod:4)SLINSIR	2	EGQVLEC(UniMod:4)SLINSIR2	12035.6	13791.8	11409.5
A0A0G2JZP7	A0A0G2JZP7	A0A0G2JZP7_RAT	Spg11	SPG11 vesicle trafficking associated, spatacsin	1	EGQVWEELR	EGQVWEELR	2	EGQVWEELR2	4091.93		
D4A7F6	D4A7F6	D4A7F6_RAT	Colec10	Collectin subfamily member 10	1	EGQYVFTDNTPLQNYSNWK	EGQYVFTDNTPLQNYSNWK	3	EGQYVFTDNTPLQNYSNWK3	10025.6	6682.74	10548.4
P63329	P63329	PP2BA_RAT	Ppp3ca	Protein phosphatase 3 catalytic subunit alpha	1	EGRLEESVALR	EGRLEESVALR	3	EGRLEESVALR3		7277.03	4796.56
A0A8J8YNE4	A0A8J8YNE4	A0A8J8YNE4_RAT	Apool	MICOS complex subunit	1	EGRPDEIHAK	EGRPDEIHAK	2	EGRPDEIHAK2			1523.27
A0A8J8YNE4	A0A8J8YNE4	A0A8J8YNE4_RAT	Apool	MICOS complex subunit	1	EGRPDEIHAK	EGRPDEIHAK	3	EGRPDEIHAK3			4694.08
Q8VHV7	Q8VHV7;Q6AY09	HNRH1_RAT	Hnrnph1	Heterogeneous nuclear ribonucleoprotein H	0	EGRPSGEAFVELESEDEVK	EGRPSGEAFVELESEDEVK	3	EGRPSGEAFVELESEDEVK3	7239.49	2031.35	
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	EGRPYCR	EGRPYC(UniMod:4)R	2	EGRPYC(UniMod:4)R2			26679.6
P20651	P20651	PP2BB_RAT	Ppp3cb	Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform	1	EGRVDEEIALR	EGRVDEEIALR	3	EGRVDEEIALR3	5315.9	10436.1	3533.11
A0A8I6GM11	A0A8I6GM11	A0A8I6GM11_RAT	Lsm12	LSM12 homolog	1	EGSALSHVR	EGSALSHVR	2	EGSALSHVR2	5602.62	1484.54	4193.93
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	EGSEPQTLPK	EGSEPQTLPK	2	EGSEPQTLPK2	51859.4	44311.3	46282.5
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	EGSGDEETLALLK	EGSGDEETLALLK	2	EGSGDEETLALLK2	4139.3	6100.13	4331.4
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	EGSGESDMDK	EGSGESDMDK	2	EGSGESDMDK2			1767.36
A0A8I5Y9U2	A0A8I5Y9U2	A0A8I5Y9U2_RAT	Cnot2	CCR4-NOT transcription complex, subunit 2	1	EGSGNPTPLINPLAGR	EGSGNPTPLINPLAGR	2	EGSGNPTPLINPLAGR2	12215.2	12589.6	12066.4
Q9R080	Q9R080	GPSM1_RAT	Gpsm1	G-protein-signaling modulator 1	1	EGSHSPLDSADVR	EGSHSPLDSADVR	3	EGSHSPLDSADVR3	7228.64	9653.88	14090.5
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	EGSIGDMAVLGITESFQVK	EGSIGDMAVLGITESFQVK	3	EGSIGDMAVLGITESFQVK3	7179.94	2692.51	6000.47
D4AB70	D4AB70	D4AB70_RAT	Edem3	alpha-1,2-Mannosidase	1	EGSIILDAIR	EGSIILDAIR	2	EGSIILDAIR2	4717.1	3619.17	10248.6
A0A8I6ANF5	A0A8I6ANF5	A0A8I6ANF5_RAT	Dffa	DNA fragmentation factor subunit alpha	1	EGSILSNQNESK	EGSILSNQNESK	2	EGSILSNQNESK2	34138.2	39856.8	38150
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	EGSIYLNDFAR	EGSIYLNDFAR	2	EGSIYLNDFAR2	7708.25	14809.7	4773.51
D3ZMI6	D3ZMI6	D3ZMI6_RAT	Olfm4	Olfactomedin 4	1	EGSLAITMR	EGSLAITMR	2	EGSLAITMR2	351730	379404	397007
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	EGSLQALFQHGGDVAR	EGSLQALFQHGGDVAR	3	EGSLQALFQHGGDVAR3	14138.8	19986.5	25119.1
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	EGSLTGTK	EGSLTGTK	2	EGSLTGTK2	21819.3	40788.2	33776.9
Q63450	Q63450	KCC1A_RAT	Camk1	Calcium/calmodulin-dependent protein kinase type 1	1	EGSMENEIAVLHK	EGSMENEIAVLHK	3	EGSMENEIAVLHK3	5497.42	7629.02	4787.37
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	EGSMIDANLK	EGSMIDANLK	2	EGSMIDANLK2	33172.1	18888.7	29616.6
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	EGSMSEDEFIEEAK	EGSMSEDEFIEEAK	2	EGSMSEDEFIEEAK2	38189.1	32833.4	44090.6
P85171	P85171	MDGA1_RAT	Mdga1	MAM domain-containing glycosylphosphatidylinositol anchor protein 1	1	EGSPAELQCEVR	EGSPAELQC(UniMod:4)EVR	2	EGSPAELQC(UniMod:4)EVR2		6401.16	8647.17
Q4KM87	Q4KM87	Q4KM87_RAT	Actl6a	Actin-like 6A	1	EGSPANWK	EGSPANWK	2	EGSPANWK2	5937.83	5018.05	6111.8
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	EGSPLHK	EGSPLHK	2	EGSPLHK2			12622.8
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	EGSQETLAHSSPSFNLDTLLVPK	EGSQETLAHSSPSFNLDTLLVPK	3	EGSQETLAHSSPSFNLDTLLVPK3	3004.29	9543.46	7022.32
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	EGSQGELTPANSQSR	EGSQGELTPANSQSR	2	EGSQGELTPANSQSR2	159701	154449	168928
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	EGSRTDDEVVQR	EGSRTDDEVVQR	3	EGSRTDDEVVQR3	28286.4	36469.6	
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	EGSRTDDEVVQREEEAIQLDGLNASQIR	EGSRTDDEVVQREEEAIQLDGLNASQIR	4	EGSRTDDEVVQREEEAIQLDGLNASQIR4	279858	297189	294505
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	EGSSALGLLGGSQAAQPGSMDVETGISCGR	EGSSALGLLGGSQAAQPGSMDVETGISC(UniMod:4)GR	3	EGSSALGLLGGSQAAQPGSMDVETGISC(UniMod:4)GR3	16745.5	14314.4	10894.3
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	EGSSGSPGTPR	EGSSGSPGTPR	2	EGSSGSPGTPR2			10986.8
P00507	P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	1	EGSSHNWQHITDQIGMFCFTGLKPEQVER	EGSSHNWQHITDQIGMFC(UniMod:4)FTGLKPEQVER	4	EGSSHNWQHITDQIGMFC(UniMod:4)FTGLKPEQVER4	45232.3	48413.9	44112.3
Q8VHF5	Q8VHF5	CISY_RAT	Cs	Citrate synthase, mitochondrial	1	EGSSIGAIDSK	EGSSIGAIDSK	2	EGSSIGAIDSK2	559690	538978	574591
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	EGSTAQLIINTEK	EGSTAQLIINTEK	2	EGSTAQLIINTEK2	32019.2	46151	34241.3
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	EGSVASTSDYVSQSYSYSSILNK	EGSVASTSDYVSQSYSYSSILNK	3	EGSVASTSDYVSQSYSYSSILNK3	2618.72		3105.13
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	EGSVCEQGTHLQLMER	EGSVC(UniMod:4)EQGTHLQLMER	2	EGSVC(UniMod:4)EQGTHLQLMER2	1379.73	1669.29	
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	EGSVCEQGTHLQLMER	EGSVC(UniMod:4)EQGTHLQLMER	3	EGSVC(UniMod:4)EQGTHLQLMER3	77052.2	67292.3	51323.9
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	EGSVVVDLAAEAGGNFETTKPGELYVHK	EGSVVVDLAAEAGGNFETTKPGELYVHK	3	EGSVVVDLAAEAGGNFETTKPGELYVHK3	5870.95	2670.46	5582.87
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	EGSVVVDLAAEAGGNFETTKPGELYVHK	EGSVVVDLAAEAGGNFETTKPGELYVHK	4	EGSVVVDLAAEAGGNFETTKPGELYVHK4	21031	9218.46	35556.3
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	EGSWIPPESCLCK	EGSWIPPESC(UniMod:4)LC(UniMod:4)K	2	EGSWIPPESC(UniMod:4)LC(UniMod:4)K2	35421.1	57254.5	57461.5
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	EGSYIQR	EGSYIQR	2	EGSYIQR2	150418	149609	168530
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	EGSYSISVLYGEEEVPR	EGSYSISVLYGEEEVPR	2	EGSYSISVLYGEEEVPR2	1.72637e+06	1.52078e+06	1.56231e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	EGSYSISVLYGEEEVPR	EGSYSISVLYGEEEVPR	3	EGSYSISVLYGEEEVPR3	536708	493805	543289
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	EGSYSISVLYGEEEVPRSPFK	EGSYSISVLYGEEEVPRSPFK	3	EGSYSISVLYGEEEVPRSPFK3	14071.9	7080.32	7971.62
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	EGTAAPTGVVHTTSER	EGTAAPTGVVHTTSER	2	EGTAAPTGVVHTTSER2	12276.7	3841.41	2030.64
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	EGTAAPTGVVHTTSER	EGTAAPTGVVHTTSER	3	EGTAAPTGVVHTTSER3	59742.3	54798.6	63466.1
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	EGTCAGYSWSINWK	EGTC(UniMod:4)AGYSWSINWK	2	EGTC(UniMod:4)AGYSWSINWK2	8281.98	17406.4	6998.08
F1MAF8	F1MAF8	F1MAF8_RAT	Atg2b	Autophagy related 2B	1	EGTDAHLPVCLQLHYK	EGTDAHLPVC(UniMod:4)LQLHYK	4	EGTDAHLPVC(UniMod:4)LQLHYK4	3940.73	1117.29	3071.42
D3ZXJ5	D3ZXJ5	D3ZXJ5_RAT	Efl1	Elongation factor like GTPase 1	1	EGTDMFIIK	EGTDMFIIK	2	EGTDMFIIK2	5405.11		3314.54
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	EGTDSSQGIPQLVSNISACQVIAEAVR	EGTDSSQGIPQLVSNISAC(UniMod:4)QVIAEAVR	3	EGTDSSQGIPQLVSNISAC(UniMod:4)QVIAEAVR3	52871.8	50003.4	49214.2
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	EGTDSYAITFR	EGTDSYAITFR	2	EGTDSYAITFR2	17227.2	10488	14470.9
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	EGTEAWEAAMK	EGTEAWEAAMK	2	EGTEAWEAAMK2	193349	259446	245436
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	EGTEMENSK	EGTEMENSK	2	EGTEMENSK2			7499.38
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	EGTEQVR	EGTEQVR	2	EGTEQVR2			472632
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	EGTFPMTQNR	EGTFPMTQNR	2	EGTFPMTQNR2	16072.9	13326.2	16981.9
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	EGTGPVTFQFYK	EGTGPVTFQFYK	2	EGTGPVTFQFYK2	55070.4	49646.6	62392.9
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	EGTGSSGPK	EGTGSSGPK	1	EGTGSSGPK1		602.559	2155.65
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	EGTGSSGPK	EGTGSSGPK	2	EGTGSSGPK2	27459.7	10176.8	18552.2
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	EGTGSSGPKEPHASSTK	EGTGSSGPKEPHASSTK	2	EGTGSSGPKEPHASSTK2			41811.9
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	EGTGSSGPKEPHASSTK	EGTGSSGPKEPHASSTK	3	EGTGSSGPKEPHASSTK3			73769.1
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	EGTGSSGPKEPHASSTK	EGTGSSGPKEPHASSTK	4	EGTGSSGPKEPHASSTK4			160308
Q6P9U8	Q6P9U8	EIF3H_RAT	Eif3h	Eukaryotic translation initiation factor 3 subunit H	1	EGTGSTATSSSSTGGAVGK	EGTGSTATSSSSTGGAVGK	2	EGTGSTATSSSSTGGAVGK2	59468.1		44722.8
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	EGTGTETAMIGDR	EGTGTETAMIGDR	2	EGTGTETAMIGDR2	7277.54	7111.08	3274.22
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	EGTIPPEYR	EGTIPPEYR	2	EGTIPPEYR2	38523.4	25938.6	29702.7
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	EGTLDLHGLPIPVVWTR	EGTLDLHGLPIPVVWTR	2	EGTLDLHGLPIPVVWTR2	18970.5	15107.5	16050.6
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	EGTLDLHGLPIPVVWTR	EGTLDLHGLPIPVVWTR	3	EGTLDLHGLPIPVVWTR3	199519	243392	214736
Q66H54	Q66H54	FHI1B_RAT	Fhip1b	FHF complex subunit HOOK-interacting protein 1B	1	EGTLGQQAR	EGTLGQQAR	2	EGTLGQQAR2	10548.4		
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	EGTLIVR	EGTLIVR	2	EGTLIVR2	14172.1	20125.6	18132.6
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	EGTLMIR	EGTLMIR	2	EGTLMIR2	235054	265291	251019
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	EGTLTEDGTQK	EGTLTEDGTQK	2	EGTLTEDGTQK2	7.1414e+06	113149	7.63856e+06
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	EGTMSAHLGYPVVGWHIANK	EGTMSAHLGYPVVGWHIANK	3	EGTMSAHLGYPVVGWHIANK3		1484.27	3312.01
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	EGTMSAHLGYPVVGWHIANK	EGTMSAHLGYPVVGWHIANK	4	EGTMSAHLGYPVVGWHIANK4	1944.39		4002.24
Q925N6	Q925N6	IGSF1_RAT	Igsf1	Immunoglobulin superfamily member 1	1	EGTQQPIEQQRPSGYR	EGTQQPIEQQRPSGYR	3	EGTQQPIEQQRPSGYR3	53532.4	53270.9	44374
P37727	P37727	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	1	EGTVEQVPCSR	EGTVEQVPC(UniMod:4)SR	2	EGTVEQVPC(UniMod:4)SR2	37659.4	49064	36159.6
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	EGTVTAGNASGMSDGAGVVIIASEDAVK	EGTVTAGNASGMSDGAGVVIIASEDAVK	3	EGTVTAGNASGMSDGAGVVIIASEDAVK3	4144.41	4298.3	
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	EGTVTAGNASGMSDGAGVVIIASEDAVKK	EGTVTAGNASGMSDGAGVVIIASEDAVKK	3	EGTVTAGNASGMSDGAGVVIIASEDAVKK3	6155.6	11417.1	14771.5
P05505	P05505	COX3_RAT	Mtco3	Cytochrome c oxidase subunit 3	1	EGTYQGHHTPIVQK	EGTYQGHHTPIVQK	3	EGTYQGHHTPIVQK3	5892.89	3986.54	5196.07
P05505	P05505	COX3_RAT	Mtco3	Cytochrome c oxidase subunit 3	1	EGTYQGHHTPIVQK	EGTYQGHHTPIVQK	4	EGTYQGHHTPIVQK4	9233.54	10432.3	13916.6
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	EGTYYDPVK	EGTYYDPVK	2	EGTYYDPVK2	225410	288549	317422
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	EGVAPLLGPASPTR	EGVAPLLGPASPTR	2	EGVAPLLGPASPTR2	43411.1	35530.7	35942.1
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	EGVCPEGSIDSAPVK	EGVC(UniMod:4)PEGSIDSAPVK	2	EGVC(UniMod:4)PEGSIDSAPVK2	39847.6	38164.8	25378.7
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	EGVCPEGSIDSAPVK	EGVC(UniMod:4)PEGSIDSAPVK	3	EGVC(UniMod:4)PEGSIDSAPVK3	45967.2	59794.2	31991.5
Q9EPH1	Q9EPH1	A1BG_RAT	A1bg	Alpha-1B-glycoprotein	1	EGVDGTQKPDVQHK	EGVDGTQKPDVQHK	3	EGVDGTQKPDVQHK3	4156.18		
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	EGVDWMNK	EGVDWMNK	2	EGVDWMNK2	48692.2	31295.3	35681.8
O35094	O35094	TIM44_RAT	Timm44	Mitochondrial import inner membrane translocase subunit TIM44	1	EGVEEAAR	EGVEEAAR	2	EGVEEAAR2	30987.6	38191.6	28354.5
P62963	P62963	PROF1_RAT	Pfn1	Profilin-1	1	EGVHGGLINK	EGVHGGLINK	2	EGVHGGLINK2	148937	141316	72555.3
P62963	P62963	PROF1_RAT	Pfn1	Profilin-1	1	EGVHGGLINKK	EGVHGGLINKK	2	EGVHGGLINKK2		22773.4	
P62963	P62963	PROF1_RAT	Pfn1	Profilin-1	1	EGVHGGLINKK	EGVHGGLINKK	3	EGVHGGLINKK3		303739	
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	EGVIECSFVQSK	EGVIEC(UniMod:4)SFVQSK	2	EGVIEC(UniMod:4)SFVQSK2	347364	329386	363343
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	EGVIQNFK	EGVIQNFK	2	EGVIQNFK2	46689.6	27415.8	
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	EGVKAGTK	EGVKAGTK	1	EGVKAGTK1	144288	136704	
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	EGVLAQVPLAPPQPGAPPSPAPAR	EGVLAQVPLAPPQPGAPPSPAPAR	3	EGVLAQVPLAPPQPGAPPSPAPAR3	15163.8	13821.7	14289.5
M0RA86	M0RA86	M0RA86_RAT	Ccdc9	Coiled-coil domain containing 9	1	EGVLEPNPVR	EGVLEPNPVR	2	EGVLEPNPVR2	45417.3	38425.3	34758.1
P58751	P58751	RELN_RAT	Reln	Reelin	1	EGVLLDYSK	EGVLLDYSK	2	EGVLLDYSK2	36982.5	38111.5	33228.7
F1LRI5	F1LRI5	F1LRI5_RAT	Gcn1	GCN1 activator of EIF2AK4	1	EGVLTGSPEQK	EGVLTGSPEQK	2	EGVLTGSPEQK2	3537.01		2604.4
D4A2W1	D4A2W1	D4A2W1_RAT	Enpp4	Ectonucleotide pyrophosphatase/phosphodiesterase 4	1	EGVLVEHVK	EGVLVEHVK	2	EGVLVEHVK2	22791.2	13379.9	19154.4
Q9EQN5	Q9EQN5	SMBP2_RAT	Ighmbp2	DNA-binding protein SMUBP-2	1	EGVLYAGSGTK	EGVLYAGSGTK	2	EGVLYAGSGTK2		3688.67	
Q5M7W7	Q5M7W7	SYPM_RAT	Pars2	Probable proline--tRNA ligase, mitochondrial	1	EGVMELLTGVHVV	EGVMELLTGVHVV	2	EGVMELLTGVHVV2	932.293	3368.17	1813.68
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	EGVPASLPCMASGVPTPTITWTK	EGVPASLPC(UniMod:4)MASGVPTPTITWTK	3	EGVPASLPC(UniMod:4)MASGVPTPTITWTK3	4407.91	7295.5	7174.47
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	EGVPGAAGPHVDGELLR	EGVPGAAGPHVDGELLR	3	EGVPGAAGPHVDGELLR3	16587.2	25073.5	19093.9
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	EGVPGVEK	EGVPGVEK	2	EGVPGVEK2	278494	287583	237224
Q66HG9	Q66HG9	MAVS_RAT	Mavs	Mitochondrial antiviral-signaling protein	1	EGVPTNSVTTSSVPSIKPVPVNTMSSK	EGVPTNSVTTSSVPSIKPVPVNTMSSK	3	EGVPTNSVTTSSVPSIKPVPVNTMSSK3	7666.62	16531.6	5860.51
Q6P7P5	Q6P7P5	5MP2_RAT	Bzw1	eIF5-mimic protein 2	1	EGVSAAFAVK	EGVSAAFAVK	2	EGVSAAFAVK2	71524.2	53674.3	66487.9
Q9ESS6	Q9ESS6	BCAM_RAT	Bcam	Basal cell adhesion molecule	1	EGVSCEASNIHGK	EGVSC(UniMod:4)EASNIHGK	3	EGVSC(UniMod:4)EASNIHGK3	4300.46	6522.39	4865.93
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	EGVSEALPVK	EGVSEALPVK	2	EGVSEALPVK2	33813.2	28604.1	36226
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	EGVSGLYR	EGVSGLYR	2	EGVSGLYR2	462190	463057	494694
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	EGVTAMHK	EGVTAMHK	2	EGVTAMHK2	41681		42234
Q9JHU5	Q9JHU5	ARFP1_RAT	Arfip1	Arfaptin-1	1	EGVTEAGASQGSSAPPLPCVLSPSR	EGVTEAGASQGSSAPPLPC(UniMod:4)VLSPSR	3	EGVTEAGASQGSSAPPLPC(UniMod:4)VLSPSR3	9727.68	9620.22	8799.63
G3V784	G3V784	G3V784_RAT	Adpgk	ADP-dependent glucokinase	1	EGVTFHFTPVLVCK	EGVTFHFTPVLVC(UniMod:4)K	3	EGVTFHFTPVLVC(UniMod:4)K3	8673.15	9674.99	4375.15
G3V784	G3V784	G3V784_RAT	Adpgk	ADP-dependent glucokinase	1	EGVTFHFTPVLVCKDPVR	EGVTFHFTPVLVC(UniMod:4)KDPVR	3	EGVTFHFTPVLVC(UniMod:4)KDPVR3	3098.8	3991.03	
G3V784	G3V784	G3V784_RAT	Adpgk	ADP-dependent glucokinase	1	EGVTFHFTPVLVCKDPVR	EGVTFHFTPVLVC(UniMod:4)KDPVR	4	EGVTFHFTPVLVC(UniMod:4)KDPVR4	18748.5	12907.6	13435.9
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	EGVTTYFSGDCAMEDAK	EGVTTYFSGDC(UniMod:4)AMEDAK	2	EGVTTYFSGDC(UniMod:4)AMEDAK2	8737.06	10732.3	5132.21
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	EGVTTYFSGDCAMEDAK	EGVTTYFSGDC(UniMod:4)AMEDAK	3	EGVTTYFSGDC(UniMod:4)AMEDAK3		1110.85	
P42930	P42930	HSPB1_RAT	Hspb1	Heat shock protein beta-1	1	EGVVEITGK	EGVVEITGK	2	EGVVEITGK2	9077.08	4106	4682.63
A0A0U1RS29	A0A0U1RS29	A0A0U1RS29_RAT	Rgl2	Ral guanine nucleotide dissociation stimulator-like 2	1	EGVVGGSADLIR	EGVVGGSADLIR	2	EGVVGGSADLIR2	23064.6	15216.6	27463.4
P30427	P30427	PLEC_RAT	Plec	Plectin	1	EGVVGPELHHK	EGVVGPELHHK	3	EGVVGPELHHK3	25536.3	12525	14960.8
Q68G12	Q68G12	SIAT9_RAT	St3gal5	Lactosylceramide alpha-2,3-sialyltransferase	1	EGVVQDLSGGIH	EGVVQDLSGGIH	2	EGVVQDLSGGIH2	7221.59	4620.47	8000.09
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	EGVYTVFAPTNEAFQAMPPEELNK	EGVYTVFAPTNEAFQAMPPEELNK	3	EGVYTVFAPTNEAFQAMPPEELNK3	249612	262316	279714
M0RCP2	M0RCP2;A0A8I6G2U9	M0RCP2_RAT	Sh3pxd2b	SH3 and PX domains 2B	0	EGWAPASYLK	EGWAPASYLK	2	EGWAPASYLK2	11666.9	22709.1	15172.6
F1MAR6	F1MAR6	F1MAR6_RAT	Prodh	Proline dehydrogenase	1	EGWCFGAK	EGWC(UniMod:4)FGAK	2	EGWC(UniMod:4)FGAK2	10963.4		
M0R719	M0R719	M0R719_RAT	Micos13	MICOS complex subunit MIC13	1	EGWEYVK	EGWEYVK	2	EGWEYVK2	62970.3	73663.9	81746
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	EGWPLDIR	EGWPLDIR	2	EGWPLDIR2	314486	297184	290501
P47727	P47727	CBR1_RAT	Cbr1	Carbonyl reductase [NADPH] 1	1	EGWPNSAYGVTK	EGWPNSAYGVTK	2	EGWPNSAYGVTK2	22559.9	15733.8	16324.4
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	EGWQVEEADDWLR	EGWQVEEADDWLR	2	EGWQVEEADDWLR2	26470.9	21847.7	32149.7
Q63060	Q63060;D3Z8F7	GLPK_RAT	Gk	Glycerol kinase	0	EGWVEQDPK	EGWVEQDPK	2	EGWVEQDPK2	16111.3	11256.3	16636.2
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	EGWVPASSLATLLGK	EGWVPASSLATLLGK	2	EGWVPASSLATLLGK2	61119.3	82424	89288.8
P85515	P85515	ACTZ_RAT	Actr1a	Alpha-centractin	1	EGYDFHSSSEFEIVK	EGYDFHSSSEFEIVK	2	EGYDFHSSSEFEIVK2	1388.55		3770.38
P85515	P85515	ACTZ_RAT	Actr1a	Alpha-centractin	1	EGYDFHSSSEFEIVK	EGYDFHSSSEFEIVK	3	EGYDFHSSSEFEIVK3	35683.9	34313.8	36916.1
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	EGYDFTEGSTEK	EGYDFTEGSTEK	2	EGYDFTEGSTEK2	48277.7	56098.6	55409.7
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	EGYENFFGK	EGYENFFGK	2	EGYENFFGK2	48929.3	56092.1	65204.7
P10959	P10959;Q63108	EST1C_RAT	Ces1c	Carboxylesterase 1C	0	EGYLQIGATTQQAQK	EGYLQIGATTQQAQK	2	EGYLQIGATTQQAQK2	130344	138046	129257
P10959	P10959;Q63108	EST1C_RAT	Ces1c	Carboxylesterase 1C	0	EGYLQIGATTQQAQK	EGYLQIGATTQQAQK	3	EGYLQIGATTQQAQK3	10321.9	13178.4	12243
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	EGYLREEVLLDNIPR	EGYLREEVLLDNIPR	3	EGYLREEVLLDNIPR3	16048.5	23774.5	20027
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	EGYLVKK	EGYLVKK	2	EGYLVKK2	3185.15	970.138	2007.62
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	EGYNGYTGAFQCLVEK	EGYNGYTGAFQC(UniMod:4)LVEK	2	EGYNGYTGAFQC(UniMod:4)LVEK2	428133	444745	420254
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	EGYNGYTGAFQCLVEK	EGYNGYTGAFQC(UniMod:4)LVEK	3	EGYNGYTGAFQC(UniMod:4)LVEK3	101412	112365	111607
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	EGYSGDGIQSCK	EGYSGDGIQSC(UniMod:4)K	2	EGYSGDGIQSC(UniMod:4)K2	456.268	2210.1	764.93
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	EGYTLAGPDTIICQANGK	EGYTLAGPDTIIC(UniMod:4)QANGK	2	EGYTLAGPDTIIC(UniMod:4)QANGK2	24963.8	19046.4	21965.9
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	EGYTLAGPDTIICQANGK	EGYTLAGPDTIIC(UniMod:4)QANGK	3	EGYTLAGPDTIIC(UniMod:4)QANGK3		4910.12	8730.42
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	EHAADGPQLQSLAQAEASASGNLTK	EHAADGPQLQSLAQAEASASGNLTK	3	EHAADGPQLQSLAQAEASASGNLTK3	8512.07	19339.7	18030.2
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	EHAALEPR	EHAALEPR	2	EHAALEPR2		41356.2	
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	EHAITNSGQFHCQR	EHAITNSGQFHC(UniMod:4)QR	2	EHAITNSGQFHC(UniMod:4)QR2			6239.74
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	EHAITNSGQFHCQR	EHAITNSGQFHC(UniMod:4)QR	3	EHAITNSGQFHC(UniMod:4)QR3	18378.5	11575.3	19680
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	EHAITNSGQFHCQR	EHAITNSGQFHC(UniMod:4)QR	4	EHAITNSGQFHC(UniMod:4)QR4	9062.03	18083.5	24700.7
P56603	P56603	SCAM1_RAT	Scamp1	Secretory carrier-associated membrane protein 1	1	EHALAQAELLK	EHALAQAELLK	2	EHALAQAELLK2	69250.8	66205.6	55042.9
P56603	P56603	SCAM1_RAT	Scamp1	Secretory carrier-associated membrane protein 1	1	EHALAQAELLK	EHALAQAELLK	3	EHALAQAELLK3	115404	126720	120141
P62630	P62632;P62630;F1M6C2;M0R757;A0A8I6AQI9	EF1A1_RAT	Eef1a1	Elongation factor 1-alpha 1	0	EHALLAYTLGVK	EHALLAYTLGVK	2	EHALLAYTLGVK2	25025	34567	17421.1
P62630	P62632;P62630;F1M6C2;M0R757;A0A8I6AQI9	EF1A1_RAT	Eef1a1	Elongation factor 1-alpha 1	0	EHALLAYTLGVK	EHALLAYTLGVK	3	EHALLAYTLGVK3	97554.2	79288	71702.8
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	EHALLNAR	EHALLNAR	2	EHALLNAR2	6391.35		
P83941	A0A0G2K2A0;P83941;A0A096MIY6;A0A8I6AKW3	ELOC_RAT	Eloc	Elongin-C	0	EHALTSGTIK	EHALTSGTIK	2	EHALTSGTIK2	22934.5	28033.3	18273.8
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	EHAMLAK	EHAMLAK	1	EHAMLAK1	5608.91	4524.33	4030.95
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	EHAMLAK	EHAMLAK	2	EHAMLAK2	75124	70532.8	75952.2
Q5RJQ4	Q5RJQ4	SIR2_RAT	Sirt2	NAD-dependent protein deacetylase sirtuin-2	1	EHANIDAQSGSQASNPSATVSPR	EHANIDAQSGSQASNPSATVSPR	3	EHANIDAQSGSQASNPSATVSPR3	31437.2	33480.8	35554.7
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	EHAPSIIFMDEIDSIGSSR	EHAPSIIFMDEIDSIGSSR	3	EHAPSIIFMDEIDSIGSSR3	70938	87930.1	95727
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	EHAQLMSQHSSLLGR	EHAQLMSQHSSLLGR	2	EHAQLMSQHSSLLGR2	6467.43	2053.35	2773.72
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	EHAQLMSQHSSLLGR	EHAQLMSQHSSLLGR	3	EHAQLMSQHSSLLGR3	161349	155903	157745
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	EHAQLMSQHSSLLGR	EHAQLMSQHSSLLGR	4	EHAQLMSQHSSLLGR4	189460	152239	218079
Q9QZA6	Q9QZA6	CD151_RAT	Cd151	CD151 antigen	1	EHASNIYK	EHASNIYK	1	EHASNIYK1	9907.42		7077.93
Q9QZA6	Q9QZA6	CD151_RAT	Cd151	CD151 antigen	1	EHASNIYK	EHASNIYK	2	EHASNIYK2	124814		112421
Q811U3	Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	1	EHASSLASSGLK	EHASSLASSGLK	2	EHASSLASSGLK2	1968.87	4398.35	3093.83
Q811U3	Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	1	EHASSLASSGLK	EHASSLASSGLK	3	EHASSLASSGLK3			1933.56
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	EHCPPTPAPLSVSYK	EHC(UniMod:4)PPTPAPLSVSYK	3	EHC(UniMod:4)PPTPAPLSVSYK3	23838.9	11383.3	15316.2
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	EHCSGGCCPTAAQAGTGQTDVR	EHC(UniMod:4)SGGC(UniMod:4)C(UniMod:4)PTAAQAGTGQTDVR	3	EHC(UniMod:4)SGGC(UniMod:4)C(UniMod:4)PTAAQAGTGQTDVR3	10604.3	8391.71	5844.31
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	EHCYIPSTFSQHK	EHC(UniMod:4)YIPSTFSQHK	4	EHC(UniMod:4)YIPSTFSQHK4	4266.44	6516.97	5136.57
Q5FWT9	Q5FWT9	SIKE1_RAT	Sike1	Suppressor of IKBKE 1	1	EHDAAAESLVDQSAALHR	EHDAAAESLVDQSAALHR	3	EHDAAAESLVDQSAALHR3	14674.9	9311.71	6334.45
Q5FWT9	Q5FWT9	SIKE1_RAT	Sike1	Suppressor of IKBKE 1	1	EHDAAAESLVDQSAALHR	EHDAAAESLVDQSAALHR	4	EHDAAAESLVDQSAALHR4	34969.4	22316.9	31861.5
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	EHDDIFDKLK	EHDDIFDKLK	3	EHDDIFDKLK3	6595.35	7752	866.069
B5DEH4	B5DEH4	B5DEH4_RAT	Uap1l1	UDP-N-acetylglucosamine pyrophosphorylase 1 like 1	1	EHDFFHLDPANVVLFEQR	EHDFFHLDPANVVLFEQR	4	EHDFFHLDPANVVLFEQR4		9053.89	5617.37
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	EHDLSISSDSTHVTLYGLLR	EHDLSISSDSTHVTLYGLLR	4	EHDLSISSDSTHVTLYGLLR4	4318.61	5958.45	3454.65
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	EHDLVLPIR	EHDLVLPIR	2	EHDLVLPIR2	5073.92	3212.75	7185.02
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	EHDTAEYK	EHDTAEYK	2	EHDTAEYK2			7119.57
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	EHDYRDEHFDFIQSHIR	EHDYRDEHFDFIQSHIR	3	EHDYRDEHFDFIQSHIR3	1351.59		
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	EHDYRDEHFDFIQSHIR	EHDYRDEHFDFIQSHIR	4	EHDYRDEHFDFIQSHIR4	3185.38	4644.86	10318.2
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	EHEADTANMSDK	EHEADTANMSDK	3	EHEADTANMSDK3			6807.6
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	EHEADTANMSDKELK	EHEADTANMSDKELK	4	EHEADTANMSDKELK4	4848.92	5251.93	
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	EHEALQK	EHEALQK	2	EHEALQK2			8795.96
G3V6N7	G3V6N7	G3V6N7_RAT	Slc12a6	Solute carrier family 12, member 6	1	EHEEAENITEGK	EHEEAENITEGK	3	EHEEAENITEGK3	20761.5	7007.58	22002.4
P24594	P24594	IBP5_RAT	Igfbp5	Insulin-like growth factor-binding protein 5	1	EHEEPTTSEMAEETYSPK	EHEEPTTSEMAEETYSPK	3	EHEEPTTSEMAEETYSPK3	2013.03		
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	EHEHLAVAYSTGR	EHEHLAVAYSTGR	3	EHEHLAVAYSTGR3	17732.5	4085.22	15466.9
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	EHEKDPEMLIDLQYSLAK	EHEKDPEMLIDLQYSLAK	4	EHEKDPEMLIDLQYSLAK4	5212.77		7397.22
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	EHELDLASEPEVVR	EHELDLASEPEVVR	3	EHELDLASEPEVVR3	14647.6	23272.9	14127.3
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	EHENNLEGIIK	EHENNLEGIIK	3	EHENNLEGIIK3	7962.01	5246.15	6376.86
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	EHENSTLDR	EHENSTLDR	2	EHENSTLDR2			6698.97
O35824	O35824	DNJA2_RAT	Dnaja2	DnaJ homolog subfamily A member 2	1	EHEVFQR	EHEVFQR	2	EHEVFQR2	27225.7	51069.5	56107.2
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	EHEVTIFVR	EHEVTIFVR	2	EHEVTIFVR2	2744.67	1079.03	3907.39
D4A4W6	D4A4W6	D4A4W6_RAT	Slirp	SRA stem-loop interacting RNA binding protein	1	EHFAQFGHVR	EHFAQFGHVR	3	EHFAQFGHVR3	9410.71	7433.29	
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	EHFATIR	EHFATIR	2	EHFATIR2	13023.7	10749.7	11739.3
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	EHFEVNVVPLTIQLSHR	EHFEVNVVPLTIQLSHR	4	EHFEVNVVPLTIQLSHR4	8813.39	7855.75	10117.8
E9PT79	E9PT79	E9PT79_RAT	Tsn	Translin	1	EHFGTVK	EHFGTVK	2	EHFGTVK2	29364.4	2493.21	
D4A3W2	D4A3W2	D4A3W2_RAT	Crb2	Crumbs cell polarity complex component 2	1	EHFMAWPGSPPAVSLGCR	EHFMAWPGSPPAVSLGC(UniMod:4)R	3	EHFMAWPGSPPAVSLGC(UniMod:4)R3	5846.54	9104.71	3910.65
Q80Z29	Q80Z29	NAMPT_RAT	Nampt	Nicotinamide phosphoribosyltransferase	1	EHFQDDVFNER	EHFQDDVFNER	3	EHFQDDVFNER3	8422.55	6669.34	9654.19
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	EHFVFTDNDGQVYHLTVEGNSVK	EHFVFTDNDGQVYHLTVEGNSVK	3	EHFVFTDNDGQVYHLTVEGNSVK3	1376.79		5468.38
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	EHFVFTDNDGQVYHLTVEGNSVK	EHFVFTDNDGQVYHLTVEGNSVK	4	EHFVFTDNDGQVYHLTVEGNSVK4		10926.1	9299.68
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	EHGAFDAVK	EHGAFDAVK	2	EHGAFDAVK2	11129.1	12615.2	10793.3
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	EHGAVAVER	EHGAVAVER	2	EHGAVAVER2	55437.5		45232.4
Q63483	Q63483	Q63483_RAT	Rab38	Ras-related protein Rab	1	EHGFVGWFETSAK	EHGFVGWFETSAK	2	EHGFVGWFETSAK2	10075.9	9285.42	7302.56
Q63483	Q63483	Q63483_RAT	Rab38	Ras-related protein Rab	1	EHGFVGWFETSAK	EHGFVGWFETSAK	3	EHGFVGWFETSAK3	85150.4	80088.1	79277.3
M0RDU0	M0RDU0	HAP40_RAT	F8a1	40-kDa huntingtin-associated protein	1	EHGGHPVQQPELPQQLPSVPQPSLPGPQPR	EHGGHPVQQPELPQQLPSVPQPSLPGPQPR	4	EHGGHPVQQPELPQQLPSVPQPSLPGPQPR4	38440.9	52351.2	30071
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	EHGHSNWLGDPEEPLTGFSWR	EHGHSNWLGDPEEPLTGFSWR	3	EHGHSNWLGDPEEPLTGFSWR3	35230.2	39560.4	39045.3
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	EHGHSNWLGDPEEPLTGFSWR	EHGHSNWLGDPEEPLTGFSWR	4	EHGHSNWLGDPEEPLTGFSWR4	28486.1	22245.4	29052.8
P05712	Q3B7V5;P05712	RAB2A_RAT	Rab2a	Ras-related protein Rab-2A	0	EHGLIFMETSAK	EHGLIFMETSAK	2	EHGLIFMETSAK2	39667.7	41505.4	40984.2
P05712	Q3B7V5;P05712	RAB2A_RAT	Rab2a	Ras-related protein Rab-2A	0	EHGLIFMETSAK	EHGLIFMETSAK	3	EHGLIFMETSAK3	220830	205919	219089
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	EHGLLVR	EHGLLVR	2	EHGLLVR2	11098.3	5812.89	5498.48
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	EHGLSPDVVQNIQDICNNK	EHGLSPDVVQNIQDIC(UniMod:4)NNK	3	EHGLSPDVVQNIQDIC(UniMod:4)NNK3	21960.6	27059.4	18570.8
Q6GQP4	Q6GQP4	RAB31_RAT	Rab31	Ras-related protein Rab-31	1	EHGPENIVMAIAGNK	EHGPENIVMAIAGNK	2	EHGPENIVMAIAGNK2	1180.55	1882.58	
Q6GQP4	Q6GQP4	RAB31_RAT	Rab31	Ras-related protein Rab-31	1	EHGPENIVMAIAGNK	EHGPENIVMAIAGNK	3	EHGPENIVMAIAGNK3	100079	85520.2	118771
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	EHGPGVAEPEVVTAPPEKEIPSLDQEK	EHGPGVAEPEVVTAPPEKEIPSLDQEK	3	EHGPGVAEPEVVTAPPEKEIPSLDQEK3	12933.8	8608.64	12227.8
P0C0A2	P0C0A2	VPS36_RAT	Vps36	Vacuolar protein-sorting-associated protein 36	1	EHGQIEFYR	EHGQIEFYR	3	EHGQIEFYR3	9015.58	10666.8	
D3ZM20	D3ZM20	D3ZM20_RAT	Kif13a	Kinesin family member 13A	1	EHGSQFFYLPIIK	EHGSQFFYLPIIK	3	EHGSQFFYLPIIK3		2315.11	
D4A415	D4A415	D4A415_RAT	Abraxas2	Abraxas 2, BRISC complex subunit	1	EHGTDFFDKDGVMK	EHGTDFFDKDGVMK	3	EHGTDFFDKDGVMK3	21488.2	19046.7	16579.3
D4A415	D4A415	D4A415_RAT	Abraxas2	Abraxas 2, BRISC complex subunit	1	EHGTDFFDKDGVMK	EHGTDFFDKDGVMK	4	EHGTDFFDKDGVMK4	46866.5	42168.9	60765.8
A0A8I5ZTW6	A0A8I5ZTW6	A0A8I5ZTW6_RAT	Gopc	Golgi associated PDZ and coiled-coil motif containing	1	EHGVPILISEIHPGQPADR	EHGVPILISEIHPGQPADR	3	EHGVPILISEIHPGQPADR3	30940.4	16462.5	28273.7
A0A8I5ZTW6	A0A8I5ZTW6	A0A8I5ZTW6_RAT	Gopc	Golgi associated PDZ and coiled-coil motif containing	1	EHGVPILISEIHPGQPADR	EHGVPILISEIHPGQPADR	4	EHGVPILISEIHPGQPADR4	31226.5	28510.7	23297.2
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	EHGYLGNLSAVSSSEGTIEETLNEASK	EHGYLGNLSAVSSSEGTIEETLNEASK	3	EHGYLGNLSAVSSSEGTIEETLNEASK3	12948.3	20843.8	4612.57
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	EHHDHFEIGPSGDISLK	EHHDHFEIGPSGDISLK	3	EHHDHFEIGPSGDISLK3		6995.13	3528.69
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	EHHDHFEIGPSGDISLK	EHHDHFEIGPSGDISLK	4	EHHDHFEIGPSGDISLK4	10571.6	5637.52	
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	EHHDHFEIGPSGDISLKK	EHHDHFEIGPSGDISLKK	4	EHHDHFEIGPSGDISLKK4	2389.21	8526.33	8137.19
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	EHHEPVMVYQPR	EHHEPVMVYQPR	3	EHHEPVMVYQPR3	9689.06	15772.4	10385.4
Q8CG45	Q8CG45	ARK72_RAT	Akr7a2	Aflatoxin B1 aldehyde reductase member 2	1	EHHFEAIALVEK	EHHFEAIALVEK	3	EHHFEAIALVEK3	21806.8	19264.9	12770.3
A0A0G2KB37	A0A0G2KB37	A0A0G2KB37_RAT	Peds1	Plasmanylethanolamine desaturase 1	1	EHHIDPTAITR	EHHIDPTAITR	3	EHHIDPTAITR3	17603.2	14187.3	
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	EHHSFQDLEMENEDLKEK	EHHSFQDLEMENEDLKEK	4	EHHSFQDLEMENEDLKEK4	8202.27	12409.2	12545.5
B5DF57	B5DF57	B5DF57_RAT	Epb42	protein-glutamine gamma-glutamyltransferase	1	EHHTDAISSQHLILR	EHHTDAISSQHLILR	4	EHHTDAISSQHLILR4	8842.77	2788.09	7480.6
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	EHIAASVSIPSEK	EHIAASVSIPSEK	2	EHIAASVSIPSEK2	2538.08	8052.54	8170.02
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	EHIAASVSIPSEK	EHIAASVSIPSEK	3	EHIAASVSIPSEK3	65515.9	62185.6	56700.2
P58751	P58751	RELN_RAT	Reln	Reelin	1	EHIALDTLSYSSYK	EHIALDTLSYSSYK	2	EHIALDTLSYSSYK2	2688.72	5570.02	1248.33
P58751	P58751	RELN_RAT	Reln	Reelin	1	EHIALDTLSYSSYK	EHIALDTLSYSSYK	3	EHIALDTLSYSSYK3	37648.5	28006.9	33502.7
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	EHIEELLR	EHIEELLR	2	EHIEELLR2	37760.4	26058.3	25462
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	EHIEQQIQTYQR	EHIEQQIQTYQR	2	EHIEQQIQTYQR2	2826.8	1551.77	
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	EHIEQQIQTYQR	EHIEQQIQTYQR	3	EHIEQQIQTYQR3	20954.3	23233.8	29305.3
A0A8I5ZWZ4	A0A8I5ZWZ4	A0A8I5ZWZ4_RAT	Nmt2	Glycylpeptide N-tetradecanoyltransferase	1	EHIIDTFVVESPSGK	EHIIDTFVVESPSGK	3	EHIIDTFVVESPSGK3	5507.9	4697.72	5316.35
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	EHIKNPDWR	EHIKNPDWR	2	EHIKNPDWR2	4752.57	7165.97	5133.96
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	EHIKNPDWR	EHIKNPDWR	3	EHIKNPDWR3	127012	155467	175899
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	EHILDQLK	EHILDQLK	2	EHILDQLK2	3969.96	6458.12	7012.34
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	EHIMQMLQNADWK	EHIMQMLQNADWK	2	EHIMQMLQNADWK2	29928.8	27405.7	25121.1
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	EHIMQMLQNADWK	EHIMQMLQNADWK	3	EHIMQMLQNADWK3	143171	128534	124950
Q5FVM7	Q5FVM7	DJC16_RAT	Dnajc16	DnaJ homolog subfamily C member 16	1	EHINKPADAIQAR	EHINKPADAIQAR	3	EHINKPADAIQAR3	214752	102013	216234
Q9Z2L0	Q9Z2L0;A0A8I6GHL9	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	0	EHINLGCDVDFDIAGPSIR	EHINLGC(UniMod:4)DVDFDIAGPSIR	3	EHINLGC(UniMod:4)DVDFDIAGPSIR3	131955	97020.4	112931
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	EHINSVSAMK	EHINSVSAMK	2	EHINSVSAMK2	37183.5	40085	31397.2
B2RYB1	B2RYB1	B2RYB1_RAT	Txndc11	Thioredoxin domain containing 11	1	EHISHVENAMQELR	EHISHVENAMQELR	3	EHISHVENAMQELR3	2749.67	927.545	
B2RYB1	B2RYB1	B2RYB1_RAT	Txndc11	Thioredoxin domain containing 11	1	EHISHVENAMQELR	EHISHVENAMQELR	4	EHISHVENAMQELR4	2551.05		4394.46
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	EHIYDLR	EHIYDLR	2	EHIYDLR2	80769.2	84346.4	93940.3
D3ZLN7	D3ZLN7	D3ZLN7_RAT	Commd2	COMM domain containing 2	1	EHLAFLPQVDSAVVAEFGR	EHLAFLPQVDSAVVAEFGR	3	EHLAFLPQVDSAVVAEFGR3	8085.28	9591.51	6967.8
Q6AYY8	Q6AYY8	ACATN_RAT	Slc33a1	Acetyl-coenzyme A transporter 1	1	EHLALLAVPMVPLQIILPLLISK	EHLALLAVPMVPLQIILPLLISK	3	EHLALLAVPMVPLQIILPLLISK3		3663.87	1362.32
Q6AYY8	Q6AYY8	ACATN_RAT	Slc33a1	Acetyl-coenzyme A transporter 1	1	EHLALLAVPMVPLQIILPLLISK	EHLALLAVPMVPLQIILPLLISK	4	EHLALLAVPMVPLQIILPLLISK4		3135.99	
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	EHLCEQQAELDYLCR	EHLC(UniMod:4)EQQAELDYLC(UniMod:4)R	3	EHLC(UniMod:4)EQQAELDYLC(UniMod:4)R3	93482.3	80340.2	87175.8
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	EHLEGATEK	EHLEGATEK	2	EHLEGATEK2			11897.5
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	EHLELFWSR	EHLELFWSR	2	EHLELFWSR2	99123	85486.5	108886
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	EHLELFWSR	EHLELFWSR	3	EHLELFWSR3	358000	306393	221256
A0A0G2K543	A0A0G2K543	A0A0G2K543_RAT	C2cd5	C2 calcium-dependent domain containing 5	1	EHLESASSNSGIPAAQR	EHLESASSNSGIPAAQR	3	EHLESASSNSGIPAAQR3	12817	9129.87	15209.8
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	EHLGLSWAELAR	EHLGLSWAELAR	3	EHLGLSWAELAR3	2903.32	4055.74	7446.9
Q62902	Q62902	LMAN1_RAT	Lman1	Protein ERGIC-53	1	EHLHIVK	EHLHIVK	2	EHLHIVK2	2268.92	4854.29	1878.86
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	EHLIDELDYILLPTEGWNK	EHLIDELDYILLPTEGWNK	3	EHLIDELDYILLPTEGWNK3	46229.7	61012	46863.8
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	EHLIDELDYVLVPTEAWNK	EHLIDELDYVLVPTEAWNK	3	EHLIDELDYVLVPTEAWNK3	10061.2	12394.2	7940.58
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	EHLIENEVSILR	EHLIENEVSILR	2	EHLIENEVSILR2	7444.71	12420	7603.05
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	EHLIENEVSILR	EHLIENEVSILR	3	EHLIENEVSILR3	59619.1	77949.1	63709.4
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	EHLLDEEEDEEEVMR	EHLLDEEEDEEEVMR	3	EHLLDEEEDEEEVMR3	7358.36	10302.2	12926.1
B2RYN3	B2RYN3	B2RYN3_RAT	Eef1e1	Eukaryotic translation elongation factor 1 epsilon 1	1	EHLLGSTAEEK	EHLLGSTAEEK	2	EHLLGSTAEEK2	20136.9	9687.81	6488.24
B2RYN3	B2RYN3	B2RYN3_RAT	Eef1e1	Eukaryotic translation elongation factor 1 epsilon 1	1	EHLLGSTAEEK	EHLLGSTAEEK	3	EHLLGSTAEEK3	22531.3	12919	21522.4
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	EHLLLAK	EHLLLAK	2	EHLLLAK2	14666.5	20775.2	15115.7
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	EHLLMALADLDELLVR	EHLLMALADLDELLVR	3	EHLLMALADLDELLVR3	13166.1	15235.4	15132.1
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	EHLLMALAGIDALLIQASHTQQPAESR	EHLLMALAGIDALLIQASHTQQPAESR	3	EHLLMALAGIDALLIQASHTQQPAESR3	5203.14	4298.79	2170.26
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	EHLLMALAGIDALLIQASHTQQPAESR	EHLLMALAGIDALLIQASHTQQPAESR	4	EHLLMALAGIDALLIQASHTQQPAESR4	13771.7	26863.4	20622.8
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	EHLMLEEELR	EHLMLEEELR	3	EHLMLEEELR3	8525.96	2335.23	6679.26
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	EHLNEPGTR	EHLNEPGTR	2	EHLNEPGTR2	9316.42		
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	EHLPHTEWQGQEGR	EHLPHTEWQGQEGR	2	EHLPHTEWQGQEGR2	50345.1	61177.8	43885.2
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	EHLPHTEWQGQEGR	EHLPHTEWQGQEGR	3	EHLPHTEWQGQEGR3	239940	345377	260685
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	EHLPHTEWQGQEGR	EHLPHTEWQGQEGR	4	EHLPHTEWQGQEGR4	593635	659060	645062
Q5RJS6	Q5RJS6	MSPD1_RAT	Mospd1	Motile sperm domain-containing protein 1	1	EHLTESVFFEQSCQPENR	EHLTESVFFEQSC(UniMod:4)QPENR	3	EHLTESVFFEQSC(UniMod:4)QPENR3	10049.2	5766.02	9088.57
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	EHLTNEAATGSHR	EHLTNEAATGSHR	2	EHLTNEAATGSHR2			1960.72
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	EHLTNEAATGSHR	EHLTNEAATGSHR	3	EHLTNEAATGSHR3			28227.3
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	EHLVQTLQAEVDELQIQEGK	EHLVQTLQAEVDELQIQEGK	3	EHLVQTLQAEVDELQIQEGK3	2631.5	2186.32	2534.93
D4ADT7	D4ADT7	D4ADT7_RAT	Nod1	Nucleotide-binding oligomerization domain containing 1	1	EHLVTNIR	EHLVTNIR	2	EHLVTNIR2	4803.39	5941.75	4086.28
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	EHLYFDMVTIK	EHLYFDMVTIK	2	EHLYFDMVTIK2	8061.66	3666.13	5776
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	EHLYFDMVTIK	EHLYFDMVTIK	3	EHLYFDMVTIK3	21574.4	18032.5	15448.3
G3V7E6	G3V7E6	G3V7E6_RAT	Pcm1	Pericentriolar material 1	1	EHMDEVCSSQLLTSVR	EHMDEVC(UniMod:4)SSQLLTSVR	3	EHMDEVC(UniMod:4)SSQLLTSVR3	4763.47		6532.66
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	EHMGEILYK	EHMGEILYK	2	EHMGEILYK2	10995.7		7222.82
P07867	P07867	LIPC_RAT	Lipc	Hepatic triacylglycerol lipase	1	EHMGLSVGIK	EHMGLSVGIK	2	EHMGLSVGIK2	15197.9	13476.5	13114.5
A0A8I6A9K9	A0A8I6A9K9	A0A8I6A9K9_RAT	Hypk	Huntingtin interacting protein K	1	EHMGNVVEALIALTN	EHMGNVVEALIALTN	2	EHMGNVVEALIALTN2	3532.61	9159.78	
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	EHMLAVK	EHMLAVK	1	EHMLAVK1	34800.5	34340.7	28266.8
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	EHMLAVK	EHMLAVK	2	EHMLAVK2	365518	392019	326060
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	EHMLAVKK	EHMLAVKK	2	EHMLAVKK2		1619.39	
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	EHMMDGVTTR	EHMMDGVTTR	2	EHMMDGVTTR2	88729.6	53353.7	61387.2
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	EHMMDGVTTR	EHMMDGVTTR	3	EHMMDGVTTR3	315075	250647	301350
P68511	P61983;P68511	1433F_RAT	Ywhah	14-3-3 protein eta	0	EHMQPTHPIR	EHMQPTHPIR	2	EHMQPTHPIR2	749331	891380	639306
P68511	P61983;P68511	1433F_RAT	Ywhah	14-3-3 protein eta	0	EHMQPTHPIR	EHMQPTHPIR	3	EHMQPTHPIR3	129322	112796	141524
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	EHMTTNVFHFTFMSEK	EHMTTNVFHFTFMSEK	4	EHMTTNVFHFTFMSEK4	3295.66	5404.16	4597.37
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	EHMVGIIFSR	EHMVGIIFSR	3	EHMVGIIFSR3	13051.2	10176.2	17588.7
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	EHNELQQK	EHNELQQK	2	EHNELQQK2			32812.4
Q99PD4	Q99PD4	ARC1A_RAT	Arpc1a	Actin-related protein 2/3 complex subunit 1A	1	EHNGHITGIDWAPK	EHNGHITGIDWAPK	3	EHNGHITGIDWAPK3	25712.2	26989.3	15491.5
Q99PD4	Q99PD4	ARC1A_RAT	Arpc1a	Actin-related protein 2/3 complex subunit 1A	1	EHNGHITGIDWAPK	EHNGHITGIDWAPK	4	EHNGHITGIDWAPK4	12748.9	7032.35	13497.5
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	EHNGQVTGIDWAPESNR	EHNGQVTGIDWAPESNR	2	EHNGQVTGIDWAPESNR2	21863	20520.8	18480.5
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	EHNGQVTGIDWAPESNR	EHNGQVTGIDWAPESNR	3	EHNGQVTGIDWAPESNR3	345544	321534	341594
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	EHNIFQNK	EHNIFQNK	2	EHNIFQNK2	2796.17	4999.91	7487.61
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	EHNLQVLGLVK	EHNLQVLGLVK	2	EHNLQVLGLVK2	9853.17	12547.2	8907.31
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	EHNLQVLGLVK	EHNLQVLGLVK	3	EHNLQVLGLVK3	105477	95929.4	108680
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	EHNSILETALAK	EHNSILETALAK	2	EHNSILETALAK2	5113.66		2207.11
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	EHNSILETALAK	EHNSILETALAK	3	EHNSILETALAK3	4211.21	13133.9	9714.75
A0A0G2K0W3	A0A0G2K0W3	A0A0G2K0W3_RAT	Ttyh3	Protein tweety homolog	1	EHPATKDPLLR	EHPATKDPLLR	2	EHPATKDPLLR2	6421.72	2569.66	5892.61
A0A0G2K0W3	A0A0G2K0W3	A0A0G2K0W3_RAT	Ttyh3	Protein tweety homolog	1	EHPATKDPLLR	EHPATKDPLLR	3	EHPATKDPLLR3	81826.1	101195	108062
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	EHPEGTWTGAAPVK	EHPEGTWTGAAPVK	2	EHPEGTWTGAAPVK2	5975.34		
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	EHPEGTWTGAAPVK	EHPEGTWTGAAPVK	3	EHPEGTWTGAAPVK3	30412.2	29582.7	26253.1
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	EHPEQTETAPDASAPPSVR	EHPEQTETAPDASAPPSVR	3	EHPEQTETAPDASAPPSVR3	14768.1	11804.3	12503.7
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	EHPEQTETAPDASAPPSVRPK	EHPEQTETAPDASAPPSVRPK	3	EHPEQTETAPDASAPPSVRPK3	319175	326666	335524
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	EHPEQTETAPDASAPPSVRPK	EHPEQTETAPDASAPPSVRPK	4	EHPEQTETAPDASAPPSVRPK4	637200	673149	749926
F7FHP0	F7FHP0	F7FHP0_RAT	Angptl3	Angiopoietin-like 3	1	EHPEVTSLK	EHPEVTSLK	2	EHPEVTSLK2	68553.5	71322.6	82099.7
O88658	O88658;F1M4A4	KIF1B_RAT	Kif1b	Kinesin-like protein KIF1B	0	EHPLLGPYVEDLSK	EHPLLGPYVEDLSK	3	EHPLLGPYVEDLSK3	2702.82	7889.91	4615.11
A0A0G2K2T1	A0A0G2K2T1	A0A0G2K2T1_RAT	Txlnb	Taxilin beta	1	EHPPPEVPDIPLGPNTGLPR	EHPPPEVPDIPLGPNTGLPR	3	EHPPPEVPDIPLGPNTGLPR3	3631.3	2438.23	
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	EHPREDGYYFLLQER	EHPREDGYYFLLQER	4	EHPREDGYYFLLQER4	18723.8	18084.1	13824.5
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	EHPSLDTK	EHPSLDTK	2	EHPSLDTK2	38063	32751.1	38041.3
Q9Z1A5	Q9Z1A5	ULA1_RAT	Nae1	NEDD8-activating enzyme E1 regulatory subunit	1	EHPVIESHPDNALEDLR	EHPVIESHPDNALEDLR	4	EHPVIESHPDNALEDLR4	6671.84		
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	EHPVVISK	EHPVVISK	2	EHPVVISK2	23109.9	20752.6	21900.6
P38983	P38983	RSSA_RAT	Rpsa	Small ribosomal subunit protein uS2	1	EHPWEVMPDLYFYRDPEEIEK	EHPWEVMPDLYFYRDPEEIEK	4	EHPWEVMPDLYFYRDPEEIEK4		7756.06	
P38983	P38983	RSSA_RAT	Rpsa	Small ribosomal subunit protein uS2	1	EHPWEVMPDLYFYRDPEEIEKEEQAAAEK	EHPWEVMPDLYFYRDPEEIEKEEQAAAEK	4	EHPWEVMPDLYFYRDPEEIEKEEQAAAEK4	11728.7	19340.3	11032.2
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	EHQEALAVER	EHQEALAVER	2	EHQEALAVER2	13912.4	14128.8	9715.72
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	EHQEALAVER	EHQEALAVER	3	EHQEALAVER3	32054.3	33299.2	31450.9
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	EHQEALHQQR	EHQEALHQQR	2	EHQEALHQQR2			5377.77
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	EHQEDPEMLIDLMYR	EHQEDPEMLIDLMYR	2	EHQEDPEMLIDLMYR2	6004.53	3870.47	3314.98
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	EHQEDPEMLIDLMYR	EHQEDPEMLIDLMYR	3	EHQEDPEMLIDLMYR3	13433.7	13512.9	17530.2
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	EHQHEEIQNVR	EHQHEEIQNVR	2	EHQHEEIQNVR2	33002.6		24735.7
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	EHQHEEIQNVR	EHQHEEIQNVR	3	EHQHEEIQNVR3	143337		134175
Q8R491	Q8R491	EHD3_RAT	Ehd3	EH domain-containing protein 3	1	EHQISPGDFPNLK	EHQISPGDFPNLK	2	EHQISPGDFPNLK2	41835.2	24572.7	30640.8
Q8R491	Q8R491	EHD3_RAT	Ehd3	EH domain-containing protein 3	1	EHQISPGDFPNLK	EHQISPGDFPNLK	3	EHQISPGDFPNLK3	237271	223747	200629
Q8R491	Q8R491	EHD3_RAT	Ehd3	EH domain-containing protein 3	1	EHQISPGDFPNLKR	EHQISPGDFPNLKR	3	EHQISPGDFPNLKR3	26478.5	18703.9	30030.7
Q8R491	Q8R491	EHD3_RAT	Ehd3	EH domain-containing protein 3	1	EHQISPGDFPNLKR	EHQISPGDFPNLKR	4	EHQISPGDFPNLKR4	44623.3	49450.6	57699.7
Q641Z6	Q641Z6	EHD1_RAT	Ehd1	EH domain-containing protein 1	1	EHQISSGDFPSLR	EHQISSGDFPSLR	2	EHQISSGDFPSLR2	8028.54	2421.02	
Q641Z6	Q641Z6	EHD1_RAT	Ehd1	EH domain-containing protein 1	1	EHQISSGDFPSLR	EHQISSGDFPSLR	3	EHQISSGDFPSLR3	52603.7	38098.4	40213.4
E9PSX8	E9PSX8	E9PSX8_RAT	Sipa1	Signal-induced proliferation-associated 1	1	EHQNFFGLDEALGPVAVSLR	EHQNFFGLDEALGPVAVSLR	3	EHQNFFGLDEALGPVAVSLR3		3435.46	3203.87
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	EHQQELDILR	EHQQELDILR	3	EHQQELDILR3	8138.65	12902	11000.2
P47816	P47816	PDCD2_RAT	Pdcd2	Programmed cell death protein 2	1	EHQTLDWQLGHK	EHQTLDWQLGHK	3	EHQTLDWQLGHK3	3961.5	3192.88	2561.83
O08623	O08623	SQSTM_RAT	Sqstm1	Sequestosome-1	1	EHRPPCAQEAR	EHRPPC(UniMod:4)AQEAR	3	EHRPPC(UniMod:4)AQEAR3			7581.7
Q5XI41	Q5XI41	TRAM1_RAT	Tram1	Translocating chain-associated membrane protein 1	1	EHSAFQAPPVK	EHSAFQAPPVK	2	EHSAFQAPPVK2	18629.5	17511.3	7566.73
Q5XI41	Q5XI41	TRAM1_RAT	Tram1	Translocating chain-associated membrane protein 1	1	EHSAFQAPPVK	EHSAFQAPPVK	3	EHSAFQAPPVK3	9264.53	16733.5	15436.1
Q5XI41	Q5XI41	TRAM1_RAT	Tram1	Translocating chain-associated membrane protein 1	1	EHSAFQAPPVKR	EHSAFQAPPVKR	3	EHSAFQAPPVKR3	14806.8	17667.6	12934.7
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	EHSESFSK	EHSESFSK	2	EHSESFSK2			6518.89
A0A8I6ABN1	A0A8I6ABN1	A0A8I6ABN1_RAT	Snx19	Sorting nexin 19	1	EHSGTGFHPYTLYTVK	EHSGTGFHPYTLYTVK	3	EHSGTGFHPYTLYTVK3		2976.19	7775.67
Q5U203	Q5U203	UBE2F_RAT	Ube2f	NEDD8-conjugating enzyme UBE2F	1	EHSIDGTGWAPTR	EHSIDGTGWAPTR	3	EHSIDGTGWAPTR3	3686.9	11407	10918.4
Q04400	Q04400	ADCY5_RAT	Adcy5	Adenylate cyclase type 5	1	EHSIETFLILR	EHSIETFLILR	2	EHSIETFLILR2	2513.14		3408.67
Q04400	Q04400	ADCY5_RAT	Adcy5	Adenylate cyclase type 5	1	EHSIETFLILR	EHSIETFLILR	3	EHSIETFLILR3	9229.85	8236.05	6905.86
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	EHSLTLNTR	EHSLTLNTR	2	EHSLTLNTR2	111885	110173	95925
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	EHSPPGEVVLR	EHSPPGEVVLR	2	EHSPPGEVVLR2	2.12331e+06	1.84842e+06	2.0312e+06
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	EHSPPGEVVLR	EHSPPGEVVLR	3	EHSPPGEVVLR3	9.54353e+06	1.00202e+07	1.11087e+07
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	EHSPYGPSPLGRPPSETR	EHSPYGPSPLGRPPSETR	4	EHSPYGPSPLGRPPSETR4	25813.2	9375.86	17027.6
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	EHSQSFTFDDAQQEDR	EHSQSFTFDDAQQEDR	3	EHSQSFTFDDAQQEDR3	5450.26	6017.25	10365.2
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	EHSQSFTFDDAQQEDRK	EHSQSFTFDDAQQEDRK	4	EHSQSFTFDDAQQEDRK4	10068	14683	14150.4
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	EHSSLAFWK	EHSSLAFWK	2	EHSSLAFWK2	244076	210707	213648
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	EHSSTANIIVMSLPVAR	EHSSTANIIVMSLPVAR	3	EHSSTANIIVMSLPVAR3	27271	48879.4	40917.5
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	EHSSWDLLGLEK	EHSSWDLLGLEK	3	EHSSWDLLGLEK3	6139.89	10308.8	6162.9
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	EHSVHVER	EHSVHVER	2	EHSVHVER2			8035.59
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	EHSVLGPYVDGLSK	EHSVLGPYVDGLSK	2	EHSVLGPYVDGLSK2	3994.24		
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	EHSVLGPYVDGLSK	EHSVLGPYVDGLSK	3	EHSVLGPYVDGLSK3	14763.4		
Q53UA7	O88664;Q9JLS3;Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	0	EHTAWLVMEYCLGSASDLLEVHK	EHTAWLVMEYC(UniMod:4)LGSASDLLEVHK	4	EHTAWLVMEYC(UniMod:4)LGSASDLLEVHK4	5471.78	5761.8	3492.82
Q68FY0	Q68FY0	QCR1_RAT	Uqcrc1	Cytochrome b-c1 complex subunit 1, mitochondrial	1	EHTAYLIK	EHTAYLIK	2	EHTAYLIK2	20254.8	18172.2	14681.9
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	EHTDTFSFR	EHTDTFSFR	3	EHTDTFSFR3	16016.7	13627.1	10730.7
P62749	P62749	HPCL1_RAT	Hpcal1	Hippocalcin-like protein 1	1	EHTEFTDHELQEWYK	EHTEFTDHELQEWYK	3	EHTEFTDHELQEWYK3	6523.42	2577.64	2446.04
P62749	P62749	HPCL1_RAT	Hpcal1	Hippocalcin-like protein 1	1	EHTEFTDHELQEWYK	EHTEFTDHELQEWYK	4	EHTEFTDHELQEWYK4	18733.4	13053	15909.5
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	EHTEVPEVKEEAPLAK	EHTEVPEVKEEAPLAK	3	EHTEVPEVKEEAPLAK3	1357.21	4997.27	2736.25
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	EHTEVPEVKEEAPLAK	EHTEVPEVKEEAPLAK	4	EHTEVPEVKEEAPLAK4	9614.67	10578	7560.49
P14046	A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	EHTFSSLLCASDAELSETLSLLLPPTVVK	EHTFSSLLC(UniMod:4)ASDAELSETLSLLLPPTVVK	4	EHTFSSLLC(UniMod:4)ASDAELSETLSLLLPPTVVK4	22774.2	50209.8	191963
D3ZL11	D3ZL11	D3ZL11_RAT	Rbsn	Rabenosyn, RAB effector	1	EHTPDIVK	EHTPDIVK	2	EHTPDIVK2	1387.11		
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	EHTSHLEAELEK	EHTSHLEAELEK	2	EHTSHLEAELEK2	1076.46	1515.96	2939.5
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	EHTSHLEAELEK	EHTSHLEAELEK	3	EHTSHLEAELEK3	47462.4	35503.4	35913.1
A0A8I5ZZK5	A0A8I5ZZK5	A0A8I5ZZK5_RAT	Bank1	B-cell scaffold protein with ankyrin repeats 1	1	EHTYTTELPTLLHCAAK	EHTYTTELPTLLHC(UniMod:4)AAK	4	EHTYTTELPTLLHC(UniMod:4)AAK4	4864.83	8030.63	2797.37
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	EHVDKLK	EHVDKLK	2	EHVDKLK2			4212.56
P60123	A0A0G2K0H9;P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	0	EHVEEISELFYDAK	EHVEEISELFYDAK	2	EHVEEISELFYDAK2	14464.1	10844	8599.44
P60123	A0A0G2K0H9;P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	0	EHVEEISELFYDAK	EHVEEISELFYDAK	3	EHVEEISELFYDAK3	29535.6	22852.7	20673.4
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	EHVFSSMVEK	EHVFSSMVEK	2	EHVFSSMVEK2	6824.44	6343.27	3084.24
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	EHVFSSMVEK	EHVFSSMVEK	3	EHVFSSMVEK3	8768.19	11485.8	11776.9
A0A8I5ZQF6	A0A8I6G4V0;A0A8I5ZQF6;Q6PDV7;A0A8I5ZXK4	A0A8I5ZQF6_RAT	RGD1563861	Similar to ribosomal protein L10	0	EHVIEALR	EHVIEALR	2	EHVIEALR2	10338	5230.47	5076.53
P70645	P70645	BLMH_RAT	Blmh	Bleomycin hydrolase	1	EHVKPLFNMEDK	EHVKPLFNMEDK	2	EHVKPLFNMEDK2	6893.42	2114.99	
P70645	P70645	BLMH_RAT	Blmh	Bleomycin hydrolase	1	EHVKPLFNMEDK	EHVKPLFNMEDK	3	EHVKPLFNMEDK3	16476.3	15302.2	13124.7
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	EHVMNEIDNNKDR	EHVMNEIDNNKDR	2	EHVMNEIDNNKDR2	1725.88	2639.98	3960.93
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	EHVMNEIDNNKDR	EHVMNEIDNNKDR	3	EHVMNEIDNNKDR3	33151.3	51807.8	50817.9
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	EHVMNEIDNNKDR	EHVMNEIDNNKDR	4	EHVMNEIDNNKDR4	30766.3	46903.4	63645.8
B2GV39	B2GV39	B2GV39_RAT	Mgat4b	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B	1	EHVNPPAEVSTSLK	EHVNPPAEVSTSLK	3	EHVNPPAEVSTSLK3	2092.71		
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	EHVNVVFIGHVDAGK	EHVNVVFIGHVDAGK	3	EHVNVVFIGHVDAGK3		9235.62	
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	EHVNVVFIGHVDAGK	EHVNVVFIGHVDAGK	4	EHVNVVFIGHVDAGK4	6801.08	2502.54	1757.66
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	EHVVAASK	EHVVAASK	1	EHVVAASK1			3269.03
P10868	P10868	GAMT_RAT	Gamt	Guanidinoacetate N-methyltransferase	1	EHWIIECNDGVFQR	EHWIIEC(UniMod:4)NDGVFQR	3	EHWIIEC(UniMod:4)NDGVFQR3	9851.22	11009.5	9056.59
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	EHYDLLQR	EHYDLLQR	2	EHYDLLQR2	11582.9	18459.7	9919
Q05982	Q05982	NDKA_RAT	Nme1	Nucleoside diphosphate kinase A	1	EHYIDLK	EHYIDLK	2	EHYIDLK2	13983.3	13696.9	9907.51
Q3T1K5	Q3T1K5	CAZA2_RAT	Capza2	F-actin-capping protein subunit alpha-2	1	EHYPNGVCTVYGK	EHYPNGVC(UniMod:4)TVYGK	2	EHYPNGVC(UniMod:4)TVYGK2	9109.23	16485.4	13600.9
Q3T1K5	Q3T1K5	CAZA2_RAT	Capza2	F-actin-capping protein subunit alpha-2	1	EHYPNGVCTVYGK	EHYPNGVC(UniMod:4)TVYGK	3	EHYPNGVC(UniMod:4)TVYGK3	97636.5	93673.6	117628
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	EIADAFTK	EIADAFTK	2	EIADAFTK2	133586	104532	129985
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	EIADAIK	EIADAIK	1	EIADAIK1		4750.5	4990.72
P63029	P63029;A0A8I6GKA0;A0A8I6AN27	TCTP_RAT	Tpt1	Translationally-controlled tumor protein	0	EIADGLCLEVEGK	EIADGLC(UniMod:4)LEVEGK	2	EIADGLC(UniMod:4)LEVEGK2	38809.4	23536.1	15695.1
Q568Z6	Q568Z6	IST1_RAT	Ist1	IST1 homolog	1	EIADYLAAGK	EIADYLAAGK	2	EIADYLAAGK2	21644.2	25399.5	19344
Q568Z6	Q568Z6	IST1_RAT	Ist1	IST1 homolog	1	EIADYLAAGKDER	EIADYLAAGKDER	3	EIADYLAAGKDER3	13602.2	11990.7	10471.6
P97554	P97554	DNJB9_RAT	Dnajb9	DnaJ homolog subfamily B member 9	1	EIAEAYETLSDANR	EIAEAYETLSDANR	2	EIAEAYETLSDANR2	2774.33	2149.7	
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	EIAEAYLGGK	EIAEAYLGGK	2	EIAEAYLGGK2	101403	98258.1	98199.5
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	EIAEAYLGK	EIAEAYLGK	2	EIAEAYLGK2	2.20357e+06	1.83973e+06	2.12518e+06
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	EIAEELFSR	EIAEELFSR	2	EIAEELFSR2	119736	135882	118043
D4ABK7	D4ABK7	D4ABK7_RAT	Hnrnph3	Heterogeneous nuclear ribonucleoprotein H3	1	EIAENALGK	EIAENALGK	2	EIAENALGK2	4795.29	2415.7	
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	EIAENITK	EIAENITK	2	EIAENITK2	70845.1	61655.4	49211.1
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	EIAEPELSIEVCEEK	EIAEPELSIEVC(UniMod:4)EEK	2	EIAEPELSIEVC(UniMod:4)EEK2	15213	25457.5	15744.9
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	EIAEPLFDLK	EIAEPLFDLK	2	EIAEPLFDLK2	118285	120051	127044
A0A8I6G9X6	A0A8I6G9X6	A0A8I6G9X6_RAT	Kntc1	Kinetochore associated 1	1	EIAEVNEINLEK	EIAEVNEINLEK	2	EIAEVNEINLEK2	1266.94	5586.23	
Q920F5	Q920F5	DCMC_RAT	Mlycd	Malonyl-CoA decarboxylase, mitochondrial	1	EIAEVTGDPVHESLK	EIAEVTGDPVHESLK	3	EIAEVTGDPVHESLK3	2817.77	5860.58	9680.87
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	EIAGATPYITAAEEK	EIAGATPYITAAEEK	2	EIAGATPYITAAEEK2	70496.9	58788.3	47587.7
A0A8I6AHK8	A0A8I6AHK8	A0A8I6AHK8_RAT	Tmem219	Transmembrane protein 219	1	EIAGESVLVTAR	EIAGESVLVTAR	2	EIAGESVLVTAR2	3050.7	1936.5	3203.08
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	EIAGLDASPPVR	EIAGLDASPPVR	2	EIAGLDASPPVR2	21360.7	18500.3	18359.9
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	EIAIHIGDRDNAVR	EIAIHIGDRDNAVR	3	EIAIHIGDRDNAVR3	54162.7	57130.2	45146.5
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	EIAIHIGDRDNAVR	EIAIHIGDRDNAVR	4	EIAIHIGDRDNAVR4	101642	104746	82890
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	EIAPGNQNAVCGDEGDMIFK	EIAPGNQNAVC(UniMod:4)GDEGDMIFK	3	EIAPGNQNAVC(UniMod:4)GDEGDMIFK3	26514.1	27195.8	32118.5
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	EIAPGNQNAVCGDEGDMIFKK	EIAPGNQNAVC(UniMod:4)GDEGDMIFKK	3	EIAPGNQNAVC(UniMod:4)GDEGDMIFKK3	365889	409136	422082
P84245;Q6LED0	A0A8I6A289;A0A0G2K5X7;P84245;D3ZJ08;Q6LED0;A0A8I6A9Y9;D3ZK97	H31_RAT;H33_RAT	H3-3b	Histone H3.3	0	EIAQDFK	EIAQDFK	2	EIAQDFK2	109588	50844.8	45680.4
D4A9Z2	D4A9Z2	D4A9Z2_RAT	Top3b	DNA topoisomerase	1	EIAQMFLNMTK	EIAQMFLNMTK	2	EIAQMFLNMTK2	5181.33	3804.73	3318.67
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	EIASTLMESEVLEILSVLAK	EIASTLMESEVLEILSVLAK	3	EIASTLMESEVLEILSVLAK3	2188.37		
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	EIATNPEEAGK	EIATNPEEAGK	2	EIATNPEEAGK2	37378.2	30830.6	31333.4
Q62871	Q62871	DC1I2_RAT	Dync1i2	Cytoplasmic dynein 1 intermediate chain 2	1	EIAVGDSEGQIVIYDVGEQIAVPR	EIAVGDSEGQIVIYDVGEQIAVPR	3	EIAVGDSEGQIVIYDVGEQIAVPR3	19374.1	27594	18577.4
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	EIAVTVK	EIAVTVK	1	EIAVTVK1	4012.4		2209.07
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	EIAVTVKK	EIAVTVKK	2	EIAVTVKK2	4556.39	8825.66	5883.48
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	EIAYSCGEGFILEGAR	EIAYSC(UniMod:4)GEGFILEGAR	2	EIAYSC(UniMod:4)GEGFILEGAR2	13805.9	16624.5	22733.3
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	EIAYSCGEGFILEGAR	EIAYSC(UniMod:4)GEGFILEGAR	3	EIAYSC(UniMod:4)GEGFILEGAR3	12224.3	18930	17836.4
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	EICCPVPDPK	EIC(UniMod:4)C(UniMod:4)PVPDPK	2	EIC(UniMod:4)C(UniMod:4)PVPDPK2	1.50782e+07	1.67272e+07	1.6441e+07
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	EICCPVPDPK	EIC(UniMod:4)C(UniMod:4)PVPDPK	3	EIC(UniMod:4)C(UniMod:4)PVPDPK3	26889.8	29698.2	47636
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	EICCPVPDPKSVR	EIC(UniMod:4)C(UniMod:4)PVPDPKSVR	3	EIC(UniMod:4)C(UniMod:4)PVPDPKSVR3	5021.06	12778.4	10801.1
Q66HA6	D3ZPP2;Q66HA6	ARL8B_RAT	Arl8b	ADP-ribosylation factor-like protein 8B	0	EICCYSISCK	EIC(UniMod:4)C(UniMod:4)YSISC(UniMod:4)K	2	EIC(UniMod:4)C(UniMod:4)YSISC(UniMod:4)K2	106269	107250	129892
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	EICNAYTELNDPVR	EIC(UniMod:4)NAYTELNDPVR	2	EIC(UniMod:4)NAYTELNDPVR2	7152.12	8069.11	6228.78
O35806	O35806	LTBP2_RAT	Ltbp2	Latent-transforming growth factor beta-binding protein 2	1	EICPAGHGYAYSSSDIR	EIC(UniMod:4)PAGHGYAYSSSDIR	3	EIC(UniMod:4)PAGHGYAYSSSDIR3	8730.86	11772.9	5450.21
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	EICPAGPGYHYSASDLR	EIC(UniMod:4)PAGPGYHYSASDLR	2	EIC(UniMod:4)PAGPGYHYSASDLR2	20360.7	12276.9	12162.5
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	EICPAGPGYHYSASDLR	EIC(UniMod:4)PAGPGYHYSASDLR	3	EIC(UniMod:4)PAGPGYHYSASDLR3	83629.6	101522	87085.7
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	EICPGGMGYTVSGIHR	EIC(UniMod:4)PGGMGYTVSGIHR	2	EIC(UniMod:4)PGGMGYTVSGIHR2	18578.5	18717.5	14468
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	EICPGGMGYTVSGIHR	EIC(UniMod:4)PGGMGYTVSGIHR	3	EIC(UniMod:4)PGGMGYTVSGIHR3	276863	285248	280580
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	EICSLFGEAPQNLSSSR	EIC(UniMod:4)SLFGEAPQNLSSSR	2	EIC(UniMod:4)SLFGEAPQNLSSSR2	20916	29160.2	13760.4
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	EICSLFGEAPQNLSSSR	EIC(UniMod:4)SLFGEAPQNLSSSR	3	EIC(UniMod:4)SLFGEAPQNLSSSR3	4216.87		4130.93
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	EIDCLSPEAQR	EIDC(UniMod:4)LSPEAQR	2	EIDC(UniMod:4)LSPEAQR2	141979	158763	184405
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	EIDCVAK	EIDC(UniMod:4)VAK	2	EIDC(UniMod:4)VAK2	61873.5	67942.9	62315.5
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	EIDDEANSYFQR	EIDDEANSYFQR	2	EIDDEANSYFQR2	7849.62	3120.57	6132.11
Q32KJ6	Q32KJ6	GALNS_RAT	Galns	N-acetylgalactosamine-6-sulfatase	1	EIDDSVGK	EIDDSVGK	2	EIDDSVGK2	37036.7	50236.7	44705.9
A0A8I5ZZG2	A0A8I5ZZG2	A0A8I5ZZG2_RAT	Reep3	Receptor expression-enhancing protein	1	EIDDYIVQAK	EIDDYIVQAK	2	EIDDYIVQAK2	10480.7	14684.2	13973.8
O35094	O35094	TIM44_RAT	Timm44	Mitochondrial import inner membrane translocase subunit TIM44	1	EIDESVLGHTGTYR	EIDESVLGHTGTYR	3	EIDESVLGHTGTYR3	3513.52	3136.9	8691.39
Q3B7D2	Q3B7D2	SPTC2_RAT	Sptlc2	Serine palmitoyltransferase 2	1	EIDEVGDLLQLK	EIDEVGDLLQLK	2	EIDEVGDLLQLK2	4246.22	4169.88	2598
A0A0G2K1L5	A0A0G2K1L5	A0A0G2K1L5_RAT	Reep2	Receptor expression-enhancing protein	1	EIDEYITQAR	EIDEYITQAR	2	EIDEYITQAR2	81464.8	98432.4	94909.5
Q68FU3	Q68FU3	ETFB_RAT	Etfb	Electron transfer flavoprotein subunit beta	1	EIDGGLETIR	EIDGGLETIR	2	EIDGGLETIR2	177876	162167	191215
A0A8I6A193	A0A8I6A193	A0A8I6A193_RAT	Ccdc167	Coiled-coil domain-containing protein 167	1	EIDGLEEK	EIDGLEEK	2	EIDGLEEK2	35380.5	35172.3	37402.1
Q3B7U1	Q3B7U1	Q3B7U1_RAT	Maged2	MAGE family member D2	1	EIDKNDHLYILLSTLEPTDAGILGTTK	EIDKNDHLYILLSTLEPTDAGILGTTK	4	EIDKNDHLYILLSTLEPTDAGILGTTK4		23545.4	6090.62
Q5U303	Q5U303	TAB2_RAT	Tab2	TGF-beta-activated kinase 1 and MAP3K7-binding protein 2	1	EIDLFQAR	EIDLFQAR	2	EIDLFQAR2	8850.93		8615.54
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	EIDNDDMR	EIDNDDMR	2	EIDNDDMR2	52613	67086.2	66516.5
P13721	P13721	SIAT1_RAT	St6gal1	Beta-galactoside alpha-2,6-sialyltransferase 1	1	EIDNHDAVLR	EIDNHDAVLR	3	EIDNHDAVLR3	18206.9	10919.1	14957.8
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	EIDPIVTR	EIDPIVTR	2	EIDPIVTR2	41057.4	30923.4	34849.5
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	EIDPPVQHQEEIVQSR	EIDPPVQHQEEIVQSR	2	EIDPPVQHQEEIVQSR2	259872	189899	165642
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	EIDPPVQHQEEIVQSR	EIDPPVQHQEEIVQSR	3	EIDPPVQHQEEIVQSR3	3.41552e+06	2.93372e+06	2.56586e+06
P62628	P62628	DLRB1_RAT	Dynlrb1	Dynein light chain roadblock-type 1	1	EIDPQNDLTFLR	EIDPQNDLTFLR	2	EIDPQNDLTFLR2	250535	261135	258136
P20788	P20788	UCRI_RAT	Uqcrfs1	Cytochrome b-c1 complex subunit Rieske, mitochondrial	1	EIDQEAAVEVSQLR	EIDQEAAVEVSQLR	2	EIDQEAAVEVSQLR2	6770.78	4053.58	5397.68
P20788	P20788	UCRI_RAT	Uqcrfs1	Cytochrome b-c1 complex subunit Rieske, mitochondrial	1	EIDQEAAVEVSQLRDPQHDLER	EIDQEAAVEVSQLRDPQHDLER	3	EIDQEAAVEVSQLRDPQHDLER3	12247.2	3653.4	
P20788	P20788	UCRI_RAT	Uqcrfs1	Cytochrome b-c1 complex subunit Rieske, mitochondrial	1	EIDQEAAVEVSQLRDPQHDLER	EIDQEAAVEVSQLRDPQHDLER	4	EIDQEAAVEVSQLRDPQHDLER4	55208.2	40067.5	40339.8
P13107	P13107	CP2B3_RAT	Cyp2b3	Cytochrome P450 2B3	1	EIDQVIGSQR	EIDQVIGSQR	2	EIDQVIGSQR2	19089.4	15519.7	22947.4
A1KQY6	A1KQY6	A1KQY6_RAT	St8sia4	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	1	EIDSHNFVIR	EIDSHNFVIR	3	EIDSHNFVIR3	55923.4	43378.4	67542
Q66H86	Q66H86	OLFL1_RAT	Olfml1	Olfactomedin-like protein 1	1	EIDYLQYLR	EIDYLQYLR	2	EIDYLQYLR2	70395.6	59832.9	58739.1
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	EIEAFDSESMR	EIEAFDSESMR	2	EIEAFDSESMR2	34141.4	42115.1	45206.6
Q641X3	Q641X3	HEXA_RAT	Hexa	Beta-hexosaminidase subunit alpha	1	EIEAITQAGFR	EIEAITQAGFR	2	EIEAITQAGFR2	59628.1	52383.3	51662.3
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	EIEANEWK	EIEANEWK	2	EIEANEWK2	82260.9	74317.7	61199.3
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	EIEANEWKK	EIEANEWKK	2	EIEANEWKK2	5344.28	7093.47	5489.84
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	EIEANEWKK	EIEANEWKK	3	EIEANEWKK3	74530	90917.1	100898
P35565	P35565	CALX_RAT	Canx	Calnexin	1	EIEDPEDR	EIEDPEDR	2	EIEDPEDR2	422224	565762	630810
A0A8I6AMS6	A0A8I6AMS6	A0A8I6AMS6_RAT	Rangap1	RAN GTPase activating protein 1	1	EIEEFDGLEALR	EIEEFDGLEALR	2	EIEEFDGLEALR2	9833.13	5668.86	13064.7
P19814	P19814	TGON3_RAT	Ttgn1	Trans-Golgi network integral membrane protein TGN38	1	EIEEGDTEPEEGSPLEEENEK	EIEEGDTEPEEGSPLEEENEK	3	EIEEGDTEPEEGSPLEEENEK3	26735.8	25764.6	31905.3
B2ZDP9	B2ZDP9	B2ZDP9_RAT	Orai2	Calcium release-activated calcium modulator 2 protein	1	EIEELHK	EIEELHK	2	EIEELHK2	28802	35556.8	27765.6
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	EIEELHQR	EIEELHQR	2	EIEELHQR2	37573.3	28363.6	19745.8
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EIEELQSQAQALSQEGK	EIEELQSQAQALSQEGK	2	EIEELQSQAQALSQEGK2	54214.4	50320.6	52291.2
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EIEELQSQAQALSQEGK	EIEELQSQAQALSQEGK	3	EIEELQSQAQALSQEGK3	42036.6	53429.6	42911.2
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	EIEENSR	EIEENSR	2	EIEENSR2			11720.1
M0R915	M0R915;A0A8I6GLQ4	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	0	EIEFSGR	EIEFSGR	2	EIEFSGR2	66616.8	64253.8	57346.6
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	EIEGLLENIR	EIEGLLENIR	2	EIEGLLENIR2	27373.9	29779.5	22688.7
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	EIEHVMNVGNQNR	EIEHVMNVGNQNR	3	EIEHVMNVGNQNR3	23880.9	27422.2	36074.4
B5DFN2	B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	1	EIEIAEQDMSALISLR	EIEIAEQDMSALISLR	2	EIEIAEQDMSALISLR2	20340.6	24584.7	22211.5
B5DFN2	B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	1	EIEIAEQDMSALISLR	EIEIAEQDMSALISLR	3	EIEIAEQDMSALISLR3	18675.3		18431.4
B5DFN2	B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	1	EIEIAEQDMSALISLRK	EIEIAEQDMSALISLRK	3	EIEIAEQDMSALISLRK3	9957.87	7133.24	14991.4
Q71UE8	Q71UE8	NEDD8_RAT	Nedd8	NEDD8	1	EIEIDIEPTDK	EIEIDIEPTDK	2	EIEIDIEPTDK2	28545.2	26846.1	18229.7
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	EIELLCQEHGQENDDLVQR	EIELLC(UniMod:4)QEHGQENDDLVQR	3	EIELLC(UniMod:4)QEHGQENDDLVQR3	255957	239610	270555
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	EIELYGCPPDFPEEEEEEEESSAK	EIELYGC(UniMod:4)PPDFPEEEEEEEESSAK	3	EIELYGC(UniMod:4)PPDFPEEEEEEEESSAK3	3838.38	3531.74	1837.99
O35346	O35346	FAK1_RAT	Ptk2	Focal adhesion kinase 1	1	EIEMAQK	EIEMAQK	2	EIEMAQK2	33487.3		42898.8
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	EIEMINESEK	EIEMINESEK	2	EIEMINESEK2	9569.13	10131.4	11940.6
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	EIENAAEEPR	EIENAAEEPR	2	EIENAAEEPR2	48618.3	45321.3	35472.7
P07872	P07872	ACOX1_RAT	Acox1	Peroxisomal acyl-coenzyme A oxidase 1	1	EIENLILNDPDFQHEDYNFLTR	EIENLILNDPDFQHEDYNFLTR	3	EIENLILNDPDFQHEDYNFLTR3	4450.84		3219.56
F7FHP0	F7FHP0	F7FHP0_RAT	Angptl3	Angiopoietin-like 3	1	EIENQLR	EIENQLR	2	EIENQLR2	146107	143856	127969
F7FHP0	F7FHP0	F7FHP0_RAT	Angptl3	Angiopoietin-like 3	1	EIENQLRK	EIENQLRK	2	EIENQLRK2	6927.04	6132.05	7024.25
A0A0G2K350	A0A0G2K350	A0A0G2K350_RAT	Napg	NSF attachment protein gamma	1	EIENYPTCYK	EIENYPTC(UniMod:4)YK	2	EIENYPTC(UniMod:4)YK2	56524.1	57744.8	52803.3
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	EIEPKPDFIFWTGDDTPHVPNER	EIEPKPDFIFWTGDDTPHVPNER	3	EIEPKPDFIFWTGDDTPHVPNER3	82393.9	35618.9	81994.4
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	EIEPKPDFIFWTGDDTPHVPNER	EIEPKPDFIFWTGDDTPHVPNER	4	EIEPKPDFIFWTGDDTPHVPNER4	407296	387698	448687
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	EIEQSPLVMLDR	EIEQSPLVMLDR	2	EIEQSPLVMLDR2	28362.9	26701.3	24821.8
D4ABM5	D4ABM5	D4ABM5_RAT	Mrps34	Mitochondrial ribosomal protein S34	1	EIEQVMYHDWR	EIEQVMYHDWR	3	EIEQVMYHDWR3	5769.54	4558	
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	EIESSPQYR	EIESSPQYR	2	EIESSPQYR2	33715	28926.6	44320.4
A0A0G2JYR1	A0A0G2JYR1	A0A0G2JYR1_RAT	Exoc6b	Exocyst complex component	1	EIESTDTACIGPTLR	EIESTDTAC(UniMod:4)IGPTLR	2	EIESTDTAC(UniMod:4)IGPTLR2		2304.78	1814.88
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	EIETFVSLLR	EIETFVSLLR	2	EIETFVSLLR2	18915.6	21605	17311.3
Q9R1J8	Q9R1J8	P3H1_RAT	P3h1	Prolyl 3-hydroxylase 1	1	EIETLVEEK	EIETLVEEK	2	EIETLVEEK2	2882.15	7187.27	4212.32
P61227	P61227;A0A0G2JTW1;D3ZK56	RAP2B_RAT	Rap2b	Ras-related protein Rap-2b	0	EIEVDSSPSVLEILDTAGTEQFASMR	EIEVDSSPSVLEILDTAGTEQFASMR	3	EIEVDSSPSVLEILDTAGTEQFASMR3	47313.1	35990.7	50588.9
P0C8E4	P0C8E4	M3K7_RAT	Map3k7	Mitogen-activated protein kinase kinase kinase 7	1	EIEVEEVVGR	EIEVEEVVGR	2	EIEVEEVVGR2	5830.95	7613.56	2594.99
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	EIEVEKEELELK	EIEVEKEELELK	3	EIEVEKEELELK3	5785.71		
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	EIEVPDQYGTIR	EIEVPDQYGTIR	2	EIEVPDQYGTIR2	91349.4	114320	124465
A0A8I5ZMM2	P07756;A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	0	EIEYEVVR	EIEYEVVR	2	EIEYEVVR2	39098.3	40092.8	51265.5
D3Z8Q7	D3Z8Q7	D3Z8Q7_RAT	Ciao2b	Cytosolic iron-sulfur assembly component 2B	1	EIFDLIR	EIFDLIR	2	EIFDLIR2	40063.1	29975.5	23925.9
A0A8I5ZK60	A0A8I5ZK60	A0A8I5ZK60_RAT	Ccer2	Coiled-coil glutamate-rich protein 2	1	EIFETEPQGCASPEEK	EIFETEPQGC(UniMod:4)ASPEEK	2	EIFETEPQGC(UniMod:4)ASPEEK2		2145.76	4013.18
P18395	P18395	CSDE1_RAT	Csde1	Cold shock domain-containing protein E1	1	EIFFHYSEFK	EIFFHYSEFK	3	EIFFHYSEFK3	3778.34	10509.7	9263.84
Q5RKH6	Q5RKH6	OS9_RAT	Os9	Protein OS-9	1	EIFFNILVQGAEEANKER	EIFFNILVQGAEEANKER	3	EIFFNILVQGAEEANKER3			22345.7
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	EIFGQTIIHHHIPFNWDCEFIR	EIFGQTIIHHHIPFNWDC(UniMod:4)EFIR	4	EIFGQTIIHHHIPFNWDC(UniMod:4)EFIR4	3452.28	2811.45	
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	EIFISNITQANPGIVTCLENHPHK	EIFISNITQANPGIVTC(UniMod:4)LENHPHK	4	EIFISNITQANPGIVTC(UniMod:4)LENHPHK4	8641.56	21362.4	12796.1
P62138	P62138;P63088;P62142	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	0	EIFLSQPILLELEAPLK	EIFLSQPILLELEAPLK	2	EIFLSQPILLELEAPLK2	6984.73		6043.98
P62138	P62138;P63088;P62142	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	0	EIFLSQPILLELEAPLK	EIFLSQPILLELEAPLK	3	EIFLSQPILLELEAPLK3	7779.93		
D4A746	D4A746	D4A746_RAT	Gmppb	GDP-mannose pyrophosphorylase B	1	EIFPVMAK	EIFPVMAK	2	EIFPVMAK2	26145	26238.2	33309.5
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	EIFQNEK	EIFQNEK	1	EIFQNEK1	2452.73		2584.6
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	EIFQNEK	EIFQNEK	2	EIFQNEK2	78500.3	80150.5	86605
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	EIFTFEK	EIFTFEK	1	EIFTFEK1	10337.9	6690.95	9033.32
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	EIFTFEK	EIFTFEK	2	EIFTFEK2	749179	692376	721185
F1LNS2	F1LNS2	F1LNS2_RAT	Dennd10	DENN domain containing 10	1	EIFTHLAPFSEASDAGK	EIFTHLAPFSEASDAGK	3	EIFTHLAPFSEASDAGK3	4891.32	4000.65	12339.6
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	EIFTTLEYGPVPESHACALAWLDTHNR	EIFTTLEYGPVPESHAC(UniMod:4)ALAWLDTHNR	4	EIFTTLEYGPVPESHAC(UniMod:4)ALAWLDTHNR4	17852.3	29178.1	27288.8
A0A0G2JYR4	A0A8I6AP41;A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	0	EIFVDFAPFLSR	EIFVDFAPFLSR	2	EIFVDFAPFLSR2	3797.45	6604.37	4538.28
A0A8I5ZQ33;Q4VBH2	A0A8I5ZQ33;Q4VBH2	A0A8I5ZQ33_RAT;Q4VBH2_RAT	LOC100911093;Trnt1	CCA tRNA nucleotidyltransferase 1, mitochondrial-like	0	EIGALLQQLR	EIGALLQQLR	2	EIGALLQQLR2	5339.78	4001.03	9329.15
D3ZKU7	D3ZKU7	BL1S1_RAT	Bloc1s1	Biogenesis of lysosome-related organelles complex 1 subunit 1	1	EIGDVENWAR	EIGDVENWAR	2	EIGDVENWAR2	39339.7	30143.5	35293.4
D4A8F2	D4A8F2	D4A8F2_RAT	Rsu1	Ras suppressor protein 1	1	EIGELTQLK	EIGELTQLK	2	EIGELTQLK2	556780	503680	526948
Q3KR57	Q3KR57	Q3KR57_RAT	Grap2	GRB2-related adaptor protein 2	1	EIGFFVIR	EIGFFVIR	2	EIGFFVIR2	18732.1	13345	18440.9
G3V6R4	G3V6R4	G3V6R4_RAT	Lrrc1	Leucine rich repeat containing 1	1	EIGGCCSLTVFCIR	EIGGC(UniMod:4)C(UniMod:4)SLTVFC(UniMod:4)IR	2	EIGGC(UniMod:4)C(UniMod:4)SLTVFC(UniMod:4)IR2		2996.54	1683.74
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	EIGGDGMQDITDTYK	EIGGDGMQDITDTYK	2	EIGGDGMQDITDTYK2	368855	326224	386362
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	EIGGDGMQDITDTYK	EIGGDGMQDITDTYK	3	EIGGDGMQDITDTYK3		4461.69	7004.2
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	EIGGDVQK	EIGGDVQK	1	EIGGDVQK1	18360.7	19414.8	17467.3
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	EIGGDVQK	EIGGDVQK	2	EIGGDVQK2	2.55768e+06	2.17789e+06	2.36225e+06
O88664	O88664;Q9JLS3	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	0	EIGHGSFGAVYFAR	EIGHGSFGAVYFAR	3	EIGHGSFGAVYFAR3	13326.3	19812.5	17728.2
Q9QZM5	A0A8I5ZLD3;Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	0	EIGILTTNK	EIGILTTNK	2	EIGILTTNK2	364604	310985	335513
A0A0G2K2G7	A0A0G2K2G7	A0A0G2K2G7_RAT	Anks1a	Ankyrin repeat and sterile alpha motif domain containing 1A	1	EIGISDPQHR	EIGISDPQHR	3	EIGISDPQHR3		6489.48	5161.7
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	EIGLAWR	EIGLAWR	2	EIGLAWR2	389835	366668	390276
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	EIGLLADEIEIYGK	EIGLLADEIEIYGK	2	EIGLLADEIEIYGK2	11732	8934.47	13519.7
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	EIGLLTEEVELYGETK	EIGLLTEEVELYGETK	2	EIGLLTEEVELYGETK2	20270.6	19091.7	21404.2
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	EIGLQMHEELLK	EIGLQMHEELLK	3	EIGLQMHEELLK3	41562	51990.3	41789.3
P19804	P19804	NDKB_RAT	Nme2	Nucleoside diphosphate kinase B	1	EIGLWFKPEELIDYK	EIGLWFKPEELIDYK	2	EIGLWFKPEELIDYK2	2791.91	3726.96	5490.53
P19804	P19804	NDKB_RAT	Nme2	Nucleoside diphosphate kinase B	1	EIGLWFKPEELIDYK	EIGLWFKPEELIDYK	3	EIGLWFKPEELIDYK3	36895.4	24583.8	26202.1
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	EIGNFEVGK	EIGNFEVGK	2	EIGNFEVGK2	47258.2	41732.3	46634.6
Q6P799	Q6P799	SYSC_RAT	Sars1	Serine--tRNA ligase, cytoplasmic	1	EIGNLLHPSVPISNDEDADNK	EIGNLLHPSVPISNDEDADNK	3	EIGNLLHPSVPISNDEDADNK3	18749	18778.8	16387.5
A0A8I6AF61	A0A8I6AF61	A0A8I6AF61_RAT	Dusp3	Dual specificity protein phosphatase	1	EIGPNDGFLAQLCQLNDR	EIGPNDGFLAQLC(UniMod:4)QLNDR	3	EIGPNDGFLAQLC(UniMod:4)QLNDR3	2068.01	3939.71	
D3ZTD8	D3ZTD8	SEM5A_RAT	Sema5a	Semaphorin-5A	1	EIGPWLR	EIGPWLR	2	EIGPWLR2	2419.08	9969.63	4715.09
F1LNS2	F1LNS2	F1LNS2_RAT	Dennd10	DENN domain containing 10	1	EIGQLIVQSAEDPEK	EIGQLIVQSAEDPEK	2	EIGQLIVQSAEDPEK2	8290.93	2860.65	5106.39
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EIGQSVDEVEK	EIGQSVDEVEK	2	EIGQSVDEVEK2	987220	1.13635e+06	1.07642e+06
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EIGQSVDEVEKLIK	EIGQSVDEVEKLIK	3	EIGQSVDEVEKLIK3	4037.59		4558.13
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	EIGSALTR	EIGSALTR	2	EIGSALTR2	179477	187527	189078
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	EIGSINLK	EIGSINLK	2	EIGSINLK2	30071.2	25710.9	18108.6
Q5M887	Q5M887	TPC13_RAT	Trappc13	Trafficking protein particle complex subunit 13	1	EIGTHILVCAVSYTTQGGEK	EIGTHILVC(UniMod:4)AVSYTTQGGEK	3	EIGTHILVC(UniMod:4)AVSYTTQGGEK3	10377.5	12662.7	8855.03
P07872	P07872	ACOX1_RAT	Acox1	Peroxisomal acyl-coenzyme A oxidase 1	1	EIGTHKPLPGITVGDIGPK	EIGTHKPLPGITVGDIGPK	3	EIGTHKPLPGITVGDIGPK3		10742.6	
P07872	P07872	ACOX1_RAT	Acox1	Peroxisomal acyl-coenzyme A oxidase 1	1	EIGTHKPLPGITVGDIGPK	EIGTHKPLPGITVGDIGPK	4	EIGTHKPLPGITVGDIGPK4	27357.8	21494.2	23236.3
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	EIGWGDVGGWTGQGGSILGTK	EIGWGDVGGWTGQGGSILGTK	3	EIGWGDVGGWTGQGGSILGTK3	13277.2	13502.2	16806.5
P14882	P14882	PCCA_RAT	Pcca	Propionyl-CoA carboxylase alpha chain, mitochondrial	1	EIGYPVMIK	EIGYPVMIK	2	EIGYPVMIK2	47890.9	48762.2	56434.9
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	EIHAHMEQLK	EIHAHMEQLK	3	EIHAHMEQLK3	4121.82		
Q63448	Q63448	ACOX3_RAT	Acox3	Peroxisomal acyl-coenzyme A oxidase 3	1	EIHALASAGKPLASWTAQR	EIHALASAGKPLASWTAQR	3	EIHALASAGKPLASWTAQR3	5330.21	8164.52	5591.23
Q63448	Q63448	ACOX3_RAT	Acox3	Peroxisomal acyl-coenzyme A oxidase 3	1	EIHALASAGKPLASWTAQR	EIHALASAGKPLASWTAQR	4	EIHALASAGKPLASWTAQR4	19212.6	29215	22121.7
G3V8L0	G3V8L0	G3V8L0_RAT	Wdr24	GATOR complex protein WDR24	1	EIHCVQTIASVAR	EIHC(UniMod:4)VQTIASVAR	3	EIHC(UniMod:4)VQTIASVAR3	18469.2		33790.2
Q5PQK5	Q5PQK5	Q5PQK5_RAT	Rdx	Radixin	1	EIHKPGYLANDR	EIHKPGYLANDR	3	EIHKPGYLANDR3	20827.8	8645.45	10315.8
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	EIHLAFLPYEAQVFSLDAPHSTYNLYCPFR	EIHLAFLPYEAQVFSLDAPHSTYNLYC(UniMod:4)PFR	4	EIHLAFLPYEAQVFSLDAPHSTYNLYC(UniMod:4)PFR4	49209	40639.2	49707.2
M0R5F1	M0R5F1	M0R5F1_RAT	Aspn	Asporin	1	EIHLEHNK	EIHLEHNK	2	EIHLEHNK2	17970.7		20296.2
D3ZUP5	D3ZUP5	D3ZUP5_RAT	Brk1	BRICK1 subunit of SCAR/WAVE actin nucleating complex	1	EIHQDWANR	EIHQDWANR	2	EIHQDWANR2	33686.3	27914.8	31065.8
D3ZUP5	D3ZUP5	D3ZUP5_RAT	Brk1	BRICK1 subunit of SCAR/WAVE actin nucleating complex	1	EIHQDWANR	EIHQDWANR	3	EIHQDWANR3	136736	157243	157341
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EIHQFNR	EIHQFNR	2	EIHQFNR2	175239	171942	120081
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EIHQFNRDVEDEILWVGER	EIHQFNRDVEDEILWVGER	3	EIHQFNRDVEDEILWVGER3	22049.6	28893.2	19031.6
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EIHQFNRDVEDEILWVGER	EIHQFNRDVEDEILWVGER	4	EIHQFNRDVEDEILWVGER4	157442	165759	178614
A0A0G2K0H3	A0A0G2K0H3	A0A0G2K0H3_RAT	Lrp6	Low-density lipoprotein receptor-related protein	1	EIHSNIFSPMDIHAFSQQR	EIHSNIFSPMDIHAFSQQR	4	EIHSNIFSPMDIHAFSQQR4		3523.77	10242.9
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	EIIAEYDTQVK	EIIAEYDTQVK	2	EIIAEYDTQVK2	9228.18	4957.01	
Q62784	Q62784	INP4A_RAT	Inpp4a	Inositol polyphosphate-4-phosphatase type I A	1	EIIAQINTLK	EIIAQINTLK	2	EIIAQINTLK2	9824.07	11281.4	6807.94
Q68FU3	Q68FU3	ETFB_RAT	Etfb	Electron transfer flavoprotein subunit beta	1	EIIAVSCGPPQCQETIR	EIIAVSC(UniMod:4)GPPQC(UniMod:4)QETIR	2	EIIAVSC(UniMod:4)GPPQC(UniMod:4)QETIR2	59939.3	52713.3	52390.8
Q68FU3	Q68FU3	ETFB_RAT	Etfb	Electron transfer flavoprotein subunit beta	1	EIIAVSCGPPQCQETIR	EIIAVSC(UniMod:4)GPPQC(UniMod:4)QETIR	3	EIIAVSC(UniMod:4)GPPQC(UniMod:4)QETIR3	47112.9	40032.8	39279.5
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	EIIDLQQYK	EIIDLQQYK	2	EIIDLQQYK2	102201	106223	96856.4
Q6AYZ1	P68370;Q6AYZ1;Q6P9V9	TBA1C_RAT	Tuba1c	Tubulin alpha-1C chain	0	EIIDLVLDR	EIIDLVLDR	2	EIIDLVLDR2	4.25595e+06	4.30098e+06	5.1664e+06
Q6AYZ1	P68370;Q6AYZ1;Q6P9V9	TBA1C_RAT	Tuba1c	Tubulin alpha-1C chain	0	EIIDLVLDRIR	EIIDLVLDRIR	3	EIIDLVLDRIR3	17073.8	17194	26242.1
Q5XIF6	Q5XIF6	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	1	EIIDPVLDR	EIIDPVLDR	2	EIIDPVLDR2	55201.1	55212.6	54779.5
Q5XIF6	Q5XIF6	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	1	EIIDPVLDRIR	EIIDPVLDRIR	3	EIIDPVLDRIR3	59670	83077.8	72011.4
Q7TPK6	A0A1W2Q671;Q9JIH7;Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	0	EIIEGCIR	EIIEGC(UniMod:4)IR	2	EIIEGC(UniMod:4)IR2	44498.8	40322.8	39514.2
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	EIIEHGIELFNK	EIIEHGIELFNK	2	EIIEHGIELFNK2		2567.26	
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	EIIEHGIELFNK	EIIEHGIELFNK	3	EIIEHGIELFNK3	48919.4	55913	42033.5
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	EIIEQGIDLFNK	EIIEQGIDLFNK	2	EIIEQGIDLFNK2	22052.2	25499.5	28529.7
B4F779	B4F779	DP13B_RAT	Appl2	DCC-interacting protein 13-beta	1	EIIEVQKDPEALAR	EIIEVQKDPEALAR	3	EIIEVQKDPEALAR3	7638.12	5698.06	4440.92
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	EIIFDFLCVGKPAK	EIIFDFLC(UniMod:4)VGKPAK	3	EIIFDFLC(UniMod:4)VGKPAK3	14566.7	7251.44	6488.42
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	EIIFDLLSVGK	EIIFDLLSVGK	2	EIIFDLLSVGK2	7082.96	8545.4	12649.9
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	EIIIEATK	EIIIEATK	2	EIIIEATK2	6152.24		
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	EIILVDDYSNDPEDGALLGK	EIILVDDYSNDPEDGALLGK	3	EIILVDDYSNDPEDGALLGK3	16739.3	18237.8	31570.2
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	EIIPTSEFINSK	EIIPTSEFINSK	2	EIIPTSEFINSK2	10829		11640.2
P60123	P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	1	EIIQDVTLHDLDVANAR	EIIQDVTLHDLDVANAR	3	EIIQDVTLHDLDVANAR3	2277.42		9942.58
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	EIIRNDGVLLLQALTR	EIIRNDGVLLLQALTR	3	EIIRNDGVLLLQALTR3	91639.5	74501.2	54724.2
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	EIISECK	EIISEC(UniMod:4)K	2	EIISEC(UniMod:4)K2	418199	389803	442588
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	EIISESRPAQIIK	EIISESRPAQIIK	3	EIISESRPAQIIK3	33004.5	26163.4	36520.3
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	EIISEVQR	EIISEVQR	2	EIISEVQR2	133117	114317	110612
P20070	P20070	NB5R3_RAT	Cyb5r3	NADH-cytochrome b5 reductase 3	1	EIISHDTR	EIISHDTR	2	EIISHDTR2	5693.92	4192.2	4389.93
D3ZYL0	D3ZYL0	D3ZYL0_RAT	Ripk1	Receptor interacting serine/threonine kinase 1	1	EIISLMER	EIISLMER	2	EIISLMER2	5009.9	5189.23	4272.72
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	EIIVLHNPK	EIIVLHNPK	2	EIIVLHNPK2	4357.83	3121.37	
A0A8I6AUQ7	A0A8I6AUQ7	A0A8I6AUQ7_RAT	Zpr1	ZPR1 zinc finger	1	EIIVSSFSCEHCGWNNTEIQSAGR	EIIVSSFSC(UniMod:4)EHC(UniMod:4)GWNNTEIQSAGR	3	EIIVSSFSC(UniMod:4)EHC(UniMod:4)GWNNTEIQSAGR3	3849.01	2271.18	4197.1
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	EIKEVIELPVK	EIKEVIELPVK	3	EIKEVIELPVK3	6305.8	4831.74	6926.98
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	EIKEVIELPVKHPELFEALGIAQPK	EIKEVIELPVKHPELFEALGIAQPK	4	EIKEVIELPVKHPELFEALGIAQPK4		4797.11	6841.59
D3ZRC4	D3ZRC4	PLPL8_RAT	Pnpla8	Calcium-independent phospholipase A2-gamma	1	EILALIGYVDPVK	EILALIGYVDPVK	2	EILALIGYVDPVK2	13090.3	12237.8	8220.33
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	EILAMNGNRPILR	EILAMNGNRPILR	3	EILAMNGNRPILR3	27792.2	29332.3	24001.8
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	EILCPPPPPVLNGR	EILC(UniMod:4)PPPPPVLNGR	2	EILC(UniMod:4)PPPPPVLNGR2	26855.8	19356.3	27205.1
Q63060	Q63060	GLPK_RAT	Gk	Glycerol kinase	1	EILDAMNR	EILDAMNR	2	EILDAMNR2	51291.5	44311	53096.7
D4A7V9	D4A7V9	E2AK4_RAT	Eif2ak4	eIF-2-alpha kinase GCN2	1	EILDGLAYIHEK	EILDGLAYIHEK	3	EILDGLAYIHEK3	1856.8		
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	EILEESLR	EILEESLR	2	EILEESLR2	52833.2	45484.8	54869
A0A0G2K3H2	A0A0G2K3H2;A0A8I6ANH8	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	0	EILEFPAR	EILEFPAR	2	EILEFPAR2	67901.1	78815.7	85584.2
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	EILEFPIR	EILEFPIR	2	EILEFPIR2	162160	178589	171680
A0A8I6ALB6	A0A8I6ALB6	A0A8I6ALB6_RAT	Tbc1d2b	TBC1 domain family, member 2B	1	EILELSALR	EILELSALR	2	EILELSALR2	2897.25	3205.57	3824.67
Q5XI55	Q5XI55	NGLY1_RAT	Ngly1	Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase	1	EILFIPSENEK	EILFIPSENEK	2	EILFIPSENEK2	5025.54	5917.6	5349.36
P29066	P29066	ARRB1_RAT	Arrb1	Beta-arrestin-1	1	EILGIIVSYK	EILGIIVSYK	2	EILGIIVSYK2			18492.7
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	EILGISR	EILGISR	2	EILGISR2	75412.3	51507.8	57394.8
B0BNF8	B0BNF8	B0BNF8_RAT	Htatip2	HIV-1 Tat interactive protein 2	1	EILGQNLFSK	EILGQNLFSK	2	EILGQNLFSK2	12677.6	21142.5	12221.2
P23358	A0A8I5XWB0;P23358;A0A8I6A1H0;D4A8N3	RL12_RAT	Rpl12	Large ribosomal subunit protein uL11	0	EILGTAQSVGCNVDGR	EILGTAQSVGC(UniMod:4)NVDGR	2	EILGTAQSVGC(UniMod:4)NVDGR2	7972.32	5046.71	5430.81
P23358	A0A8I5XWB0;P23358;A0A8I6A1H0;D4A8N3	RL12_RAT	Rpl12	Large ribosomal subunit protein uL11	0	EILGTAQSVGCNVDGR	EILGTAQSVGC(UniMod:4)NVDGR	3	EILGTAQSVGC(UniMod:4)NVDGR3		10597.7	8759.24
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	EILGTCK	EILGTC(UniMod:4)K	1	EILGTC(UniMod:4)K1	3520.89	7543.06	5531.45
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	EILGTCK	EILGTC(UniMod:4)K	2	EILGTC(UniMod:4)K2	1.21856e+06	1.12853e+06	1.1353e+06
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	EILHHVNQAVR	EILHHVNQAVR	3	EILHHVNQAVR3	35308.4	45044.2	23186.5
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	EILIGDK	EILIGDK	2	EILIGDK2	35064.1	32286.3	27059.3
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	EILIPVFK	EILIPVFK	2	EILIPVFK2	101490	98035.2	86900.9
O88422	O88422	GALT5_RAT	Galnt5	Polypeptide N-acetylgalactosaminyltransferase 5	1	EILLVDDFSTK	EILLVDDFSTK	2	EILLVDDFSTK2	8499.08	3516.6	4456.71
G3V6U9	G3V6U9	SETD3_RAT	Setd3	Actin-histidine N-methyltransferase	1	EILNLTSELLQK	EILNLTSELLQK	2	EILNLTSELLQK2	33292.2	17146.1	14581.8
E9PU37	E9PU37	E9PU37_RAT	Zdhhc13	Palmitoyltransferase	1	EILPLIEDSSNCDIVK	EILPLIEDSSNC(UniMod:4)DIVK	2	EILPLIEDSSNC(UniMod:4)DIVK2	22753.3	14173.8	21576.8
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	EILPNYPESGHVPPLSGGR	EILPNYPESGHVPPLSGGR	3	EILPNYPESGHVPPLSGGR3	50906.1	32969.5	48525.3
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	EILPSTR	EILPSTR	2	EILPSTR2	147427	156429	151237
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	EILQEEEDLAEIVQLVGK	EILQEEEDLAEIVQLVGK	3	EILQEEEDLAEIVQLVGK3		3502.64	5626.98
Q6TA25	Q6TA25	FGOP2_RAT	Fgfr1op2	FGFR1 oncogene partner 2 homolog	1	EILQITR	EILQITR	2	EILQITR2	136539	138507	123884
A0A8I5ZNG4	A0A8I5ZNG4	A0A8I5ZNG4_RAT	Rictor	RPTOR independent companion of MTOR, complex 2	1	EILQNVAK	EILQNVAK	2	EILQNVAK2	10142.6	15105.3	16686.2
Q63060	Q63060	GLPK_RAT	Gk	Glycerol kinase	1	EILQSVYECIEK	EILQSVYEC(UniMod:4)IEK	2	EILQSVYEC(UniMod:4)IEK2	20413	15062.5	15029.6
Q99JD4	Q99JD4;F1LNQ9	CLAP2_RAT	Clasp2	CLIP-associating protein 2	0	EILSDDK	EILSDDK	2	EILSDDK2	32220.8	31111.8	29599.9
O35547	O35547	ACSL4_RAT	Acsl4	Long-chain-fatty-acid--CoA ligase 4	1	EILSEENEMQPNGK	EILSEENEMQPNGK	2	EILSEENEMQPNGK2	2675.4	2259.47	
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	EILSEVER	EILSEVER	2	EILSEVER2	619527	624718	635343
P97544	P97544	PLPP3_RAT	Plpp3	Phospholipid phosphatase 3	1	EILSPVDIMDR	EILSPVDIMDR	2	EILSPVDIMDR2	15176.9	10342.5	13975.2
E9PT79	E9PT79	E9PT79_RAT	Tsn	Translin	1	EILTLLQGVHQGTGFQDIPK	EILTLLQGVHQGTGFQDIPK	3	EILTLLQGVHQGTGFQDIPK3	8975.4	4986.83	
Q5BJ92	Q5BJ92	PP4C_RAT	Ppp4c	Serine/threonine-protein phosphatase 4 catalytic subunit	1	EILVEESNVQR	EILVEESNVQR	2	EILVEESNVQR2	33516.9	16976.5	22371.7
P45592	P45592	COF1_RAT	Cfl1	Cofilin-1	1	EILVGDVGQTVDDPYTTFVK	EILVGDVGQTVDDPYTTFVK	3	EILVGDVGQTVDDPYTTFVK3	470699	452920	458036
Q7M0E3	Q7M0E3	DEST_RAT	Dstn	Destrin	1	EILVGDVGVTITDPFK	EILVGDVGVTITDPFK	2	EILVGDVGVTITDPFK2	74290.1	44186.9	56948.7
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	EILYVCENDSLR	EILYVC(UniMod:4)ENDSLR	2	EILYVC(UniMod:4)ENDSLR2	63591.3	50308.4	43452.2
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	EILYVCENDSLRDFVMQQVTCR	EILYVC(UniMod:4)ENDSLRDFVMQQVTC(UniMod:4)R	3	EILYVC(UniMod:4)ENDSLRDFVMQQVTC(UniMod:4)R3	14820.4		7626.77
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	EIMAEDDQVFLMK	EIMAEDDQVFLMK	2	EIMAEDDQVFLMK2	26855.9	17949.9	35096
P00787	P00787	CATB_RAT	Ctsb	Cathepsin B	1	EIMAEIYK	EIMAEIYK	2	EIMAEIYK2	53649.1	50678.5	53716.5
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	EIMALSVTETLIKPLEK	EIMALSVTETLIKPLEK	2	EIMALSVTETLIKPLEK2	8383.64	2925.01	
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	EIMALSVTETLIKPLEK	EIMALSVTETLIKPLEK	3	EIMALSVTETLIKPLEK3	73002.5	54829.1	93280.6
Q99N37	Q99N37	RHG17_RAT	Arhgap17	Rho GTPase-activating protein 17	1	EIMDPLYGIAEVEIPNIQK	EIMDPLYGIAEVEIPNIQK	3	EIMDPLYGIAEVEIPNIQK3	4615.96	2378.28	3501.19
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	EIMEVLDGR	EIMEVLDGR	2	EIMEVLDGR2	71857.1	70663.4	69831.6
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	EIMFSDITENAATVSWR	EIMFSDITENAATVSWR	3	EIMFSDITENAATVSWR3	29997.5	24549.2	20502.8
P12075	P12075	COX5B_RAT	Cox5b	Cytochrome c oxidase subunit 5B, mitochondrial	1	EIMIAAQR	EIMIAAQR	2	EIMIAAQR2	534387	702359	724105
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	EIMLSLQQR	EIMLSLQQR	2	EIMLSLQQR2	7514.32	7100.2	
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	EIMSQHNVYVDALLK	EIMSQHNVYVDALLK	3	EIMSQHNVYVDALLK3	4912.23	8176.77	6221.98
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	EINFDNFNK	EINFDNFNK	2	EINFDNFNK2	124341	129853	129644
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	EINISICPASQTSEHFR	EINISIC(UniMod:4)PASQTSEHFR	3	EINISIC(UniMod:4)PASQTSEHFR3	4425.94	9089.38	7115.22
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	EINLKDYEGQQK	EINLKDYEGQQK	2	EINLKDYEGQQK2	61497.4	75892.5	131796
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	EINLKDYEGQQK	EINLKDYEGQQK	3	EINLKDYEGQQK3	899265	1.21751e+06	1.26848e+06
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	EINLRPQMSQFLCLK	EINLRPQMSQFLC(UniMod:4)LK	3	EINLRPQMSQFLC(UniMod:4)LK3	46946.1	75245.3	63788.8
Q9Z1S7	Q9Z1S7	OMD_RAT	Omd	Osteomodulin	1	EINLSHNK	EINLSHNK	1	EINLSHNK1	2769.73	1603.46	659.384
Q9Z1S7	Q9Z1S7	OMD_RAT	Omd	Osteomodulin	1	EINLSHNK	EINLSHNK	2	EINLSHNK2	37597.3	19531.7	98373.9
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	EINLSPDSTSVIVSGLMVATK	EINLSPDSTSVIVSGLMVATK	3	EINLSPDSTSVIVSGLMVATK3	221498	324796	318761
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	EINLSPDSTSVIVSGLMVATK	EINLSPDSTSVIVSGLMVATK	4	EINLSPDSTSVIVSGLMVATK4	53421.9	33842.7	31428.2
P60905	P60905	DNJC5_RAT	Dnajc5	DnaJ homolog subfamily C member 5	1	EINNAHAILTDATK	EINNAHAILTDATK	2	EINNAHAILTDATK2	3227.56	3150.46	1381.89
P60905	P60905	DNJC5_RAT	Dnajc5	DnaJ homolog subfamily C member 5	1	EINNAHAILTDATK	EINNAHAILTDATK	3	EINNAHAILTDATK3	107169	87188.7	90377.9
P60905	P60905	DNJC5_RAT	Dnajc5	DnaJ homolog subfamily C member 5	1	EINNAHAILTDATKR	EINNAHAILTDATKR	3	EINNAHAILTDATKR3	8840.05	9187.61	6104.51
P60905	P60905	DNJC5_RAT	Dnajc5	DnaJ homolog subfamily C member 5	1	EINNAHAILTDATKR	EINNAHAILTDATKR	4	EINNAHAILTDATKR4	10283.9	14135.4	16429.3
D4A7H1	D4A7H1	SL9A9_RAT	Slc9a9	Sodium/hydrogen exchanger 9	1	EINQHNISPHQGNAILEK	EINQHNISPHQGNAILEK	3	EINQHNISPHQGNAILEK3	8891.92	3912.21	8420.05
D4A7H1	D4A7H1	SL9A9_RAT	Slc9a9	Sodium/hydrogen exchanger 9	1	EINQHNISPHQGNAILEK	EINQHNISPHQGNAILEK	4	EINQHNISPHQGNAILEK4	31831	30778.6	33818
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	EINQNVEIQR	EINQNVEIQR	2	EINQNVEIQR2	19212.8	17001.7	19824.7
P86182	P86182	CCD22_RAT	Ccdc22	Coiled-coil domain-containing protein 22	1	EINSLSGK	EINSLSGK	2	EINSLSGK2	12300.4	11868.9	11007.7
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	EINTNQEALK	EINTNQEALK	2	EINTNQEALK2	23683.9	17583.8	11197.5
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	EINTNQEALKR	EINTNQEALKR	3	EINTNQEALKR3	41684.4	39531	39454.9
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	EINWEELER	EINWEELER	2	EINWEELER2	97053.7	78752.3	105237
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	EINWEELERK	EINWEELERK	2	EINWEELERK2	3357.65	6414.89	2130.06
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	EINWEELERK	EINWEELERK	3	EINWEELERK3	13688.8	7743.71	9955.66
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	EINWQMIR	EINWQMIR	2	EINWQMIR2	26429.9	31489	23578.7
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	EINYILR	EINYILR	2	EINYILR2	64367	61467.6	66939.5
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	EIPAITYR	EIPAITYR	2	EIPAITYR2	147135	146134	137662
Q63678	Q63678	ZA2G_RAT	Azgp1	Zinc-alpha-2-glycoprotein	1	EIPAWIPLDPAAANTK	EIPAWIPLDPAAANTK	2	EIPAWIPLDPAAANTK2	120518	122055	125007
Q63678	Q63678	ZA2G_RAT	Azgp1	Zinc-alpha-2-glycoprotein	1	EIPAWIPLDPAAANTK	EIPAWIPLDPAAANTK	3	EIPAWIPLDPAAANTK3	11353.1	19979.9	12361.2
A0A8I5ZL52	A0A8I5ZL52	A0A8I5ZL52_RAT	RGD1309104	Similar to RIKEN cDNA 1700025G04 gene	1	EIPGFVHQPR	EIPGFVHQPR	3	EIPGFVHQPR3	15356.6	20285.3	11413.4
D3ZY71	D3ZY71	D3ZY71_RAT	Triap1	TP53 regulated inhibitor of apoptosis 1	1	EIPIEGLEFMGHGK	EIPIEGLEFMGHGK	3	EIPIEGLEFMGHGK3	23584.9	23338.6	35521.4
P42667	P42667	SC11A_RAT	Sec11a	Signal peptidase complex catalytic subunit SEC11A	1	EIPIVHR	EIPIVHR	2	EIPIVHR2	75563.1	76485.4	77418
Q4V8I7	Q4V8I7	LRC8A_RAT	Lrrc8a	Volume-regulated anion channel subunit LRRC8A	1	EIPLWIYSLK	EIPLWIYSLK	2	EIPLWIYSLK2	25366.5	13329.3	16412.2
D3ZEE4	D3ZEE4	D3ZEE4_RAT	Plxdc1	Plexin domain containing 1	1	EIPMAVLDISSAQHPVK	EIPMAVLDISSAQHPVK	3	EIPMAVLDISSAQHPVK3	36180.9	26139.2	28672.8
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	EIPMTVYTTK	EIPMTVYTTK	2	EIPMTVYTTK2	22595.5	5700.69	16662.3
B2GV54	B2GV54	NCEH1_RAT	Nceh1	Neutral cholesterol ester hydrolase 1	1	EIPQLLDAAASPLIAEQEVLQALPK	EIPQLLDAAASPLIAEQEVLQALPK	3	EIPQLLDAAASPLIAEQEVLQALPK3		6086.75	6753.39
P83941	P83941;A0A096MIY6;A0A8I6AKW3	ELOC_RAT	Eloc	Elongin-C	0	EIPSHVLSK	EIPSHVLSK	2	EIPSHVLSK2	46478.1	41466.8	39765.4
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	EIPSLDQEK	EIPSLDQEK	2	EIPSLDQEK2	419980	410096	360016
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	EIPSPEMETPAQK	EIPSPEMETPAQK	2	EIPSPEMETPAQK2	8277.53		8483.39
Q6AYI5	Q6AYI5	SHOC2_RAT	Shoc2	Leucine-rich repeat protein SHOC-2	1	EIPSVVYR	EIPSVVYR	2	EIPSVVYR2	12267.4	26126.7	14913.9
P01048	P01048	KNT1_RAT	Map1	T-kininogen 1	1	EIPVDSPELK	EIPVDSPELK	2	EIPVDSPELK2	1.83494e+06	1.77231e+06	1.88994e+06
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	EIPVESIEEVSK	EIPVESIEEVSK	2	EIPVESIEEVSK2	113070	120512	100081
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	EIQALEEFR	EIQALEEFR	2	EIQALEEFR2	12036.8	8294.71	8062.5
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	EIQALEEFREK	EIQALEEFREK	3	EIQALEEFREK3	17943.7	10911.9	8925.29
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	EIQATNQIGGLYK	EIQATNQIGGLYK	2	EIQATNQIGGLYK2	74936.8	68471.3	87893.3
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	EIQEHINAHHAYESQISSMAK	EIQEHINAHHAYESQISSMAK	4	EIQEHINAHHAYESQISSMAK4	11217.6	4348.04	14318.7
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	EIQELGQLIQAVQQCIEAAGHEHQPDMQK	EIQELGQLIQAVQQC(UniMod:4)IEAAGHEHQPDMQK	4	EIQELGQLIQAVQQC(UniMod:4)IEAAGHEHQPDMQK4			7037.36
A0A8I6AML4	A0A8I6AML4	A0A8I6AML4_RAT	Galc	Galactocerebrosidase	1	EIQELQVWYTK	EIQELQVWYTK	2	EIQELQVWYTK2	1362.31		4405.04
Q63468	Q63468	KPRA_RAT	Prpsap1	Phosphoribosyl pyrophosphate synthase-associated protein 1	1	EIQGFFCFPVDNLR	EIQGFFC(UniMod:4)FPVDNLR	2	EIQGFFC(UniMod:4)FPVDNLR2	3395	7955.4	
O08618	O08618	KPRB_RAT	Prpsap2	Phosphoribosyl pyrophosphate synthase-associated protein 2	1	EIQGFFNIPVDNLR	EIQGFFNIPVDNLR	2	EIQGFFNIPVDNLR2	11259.8	17533.9	22014.6
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EIQGHQPR	EIQGHQPR	2	EIQGHQPR2			12602.5
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	EIQGISEQYLR	EIQGISEQYLR	2	EIQGISEQYLR2	11380.5	17131.7	10702.3
O35964	O35179;O35964	SH3G1_RAT	Sh3gl1	Endophilin-A2	0	EIQHHLK	EIQHHLK	2	EIQHHLK2			9062.78
P21708	P21708	MK03_RAT	Mapk3	Mitogen-activated protein kinase 3	1	EIQILLR	EIQILLR	2	EIQILLR2	18097.8	8724.78	11417.9
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	EIQLLQLK	EIQLLQLK	2	EIQLLQLK2	1392.02	2675.63	4181.41
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	EIQMLAR	EIQMLAR	2	EIQMLAR2		28117.9	43335.5
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	EIQNAGDQAQENR	EIQNAGDQAQENR	2	EIQNAGDQAQENR2	45553.1	32300.6	39946.9
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	EIQNASHR	EIQNASHR	2	EIQNASHR2			3501.13
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	EIQNAVQGVK	EIQNAVQGVK	2	EIQNAVQGVK2	24950.5	17592.7	12992
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	EIQNPQER	EIQNPQER	2	EIQNPQER2	11899		
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	EIQNPQERPGLGSNPCIPFFYR	EIQNPQERPGLGSNPC(UniMod:4)IPFFYR	3	EIQNPQERPGLGSNPC(UniMod:4)IPFFYR3	36927.9	13460.2	40598.8
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	EIQPGAFR	EIQPGAFR	2	EIQPGAFR2	194401	124637	119016
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	EIQPPFKPK	EIQPPFKPK	2	EIQPPFKPK2	40870.2	40757.8	36271.2
Q5XIB4	Q5XIB4	UFSP2_RAT	Ufsp2	Ufm1-specific protease 2	1	EIQQALVDAGDKPATFVGSR	EIQQALVDAGDKPATFVGSR	3	EIQQALVDAGDKPATFVGSR3	16145.8	16637.8	14750.4
A0A8I5ZS17	A0A8I5ZS17	A0A8I5ZS17_RAT	Snx25	Sorting nexin 25	1	EIQQCLVGNK	EIQQC(UniMod:4)LVGNK	2	EIQQC(UniMod:4)LVGNK2	5479.36	4565.65	5625.71
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	EIQQQMESR	EIQQQMESR	2	EIQQQMESR2	3008.77	2278.8	3985.11
A0A8I6A9K9	A0A8I6A9K9	A0A8I6A9K9_RAT	Hypk	Huntingtin interacting protein K	1	EIQSSNLETAMSVIGDRR	EIQSSNLETAMSVIGDRR	3	EIQSSNLETAMSVIGDRR3	20437.3	14318.2	16631.1
Q00715	Q00715;A0A8I6AGQ8;A0A8I5ZLH6;A0A8I6A7P3;A0A8I5ZSA8;A0A8I6AFW8;Q00729;G3V9C7	H2B1_RAT		Histone H2B type 1	0	EIQTAVR	EIQTAVR	2	EIQTAVR2	195713	94567.3	86999.6
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	EIQVQHPAAK	EIQVQHPAAK	2	EIQVQHPAAK2	15321	25085.3	17756.2
Q63686	O35832;Q63686;O35831	CDK16_RAT	Cdk16	Cyclin-dependent kinase 16	0	EIRLEHEEGAPCTAIR	EIRLEHEEGAPC(UniMod:4)TAIR	4	EIRLEHEEGAPC(UniMod:4)TAIR4	4929.25	5667.61	
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	EIRPALELLEPIEQK	EIRPALELLEPIEQK	3	EIRPALELLEPIEQK3	64724.2	35384.8	42401.7
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	EIRPNATVQWEEVCQPWVSGHR	EIRPNATVQWEEVC(UniMod:4)QPWVSGHR	3	EIRPNATVQWEEVC(UniMod:4)QPWVSGHR3	134321	100991	79356
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	EIRPNATVQWEEVCQPWVSGHR	EIRPNATVQWEEVC(UniMod:4)QPWVSGHR	4	EIRPNATVQWEEVC(UniMod:4)QPWVSGHR4	152406	133334	134530
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	EIRPNATVQWEEVCQPWVSGHRK	EIRPNATVQWEEVC(UniMod:4)QPWVSGHRK	4	EIRPNATVQWEEVC(UniMod:4)QPWVSGHRK4	10747.4	17439.1	12394
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	EISANSIWEPEK	EISANSIWEPEK	2	EISANSIWEPEK2	7.87255e+06	9.25428e+06	9.64771e+06
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	EISANSIWEPEK	EISANSIWEPEK	3	EISANSIWEPEK3	36647.8	49439.5	56159.6
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	EISANSIWEPEKAK	EISANSIWEPEKAK	2	EISANSIWEPEKAK2	151379	223189	202824
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	EISANSIWEPEKAK	EISANSIWEPEKAK	3	EISANSIWEPEKAK3	1.10445e+06	1.64309e+06	1.87201e+06
A0A8I6A5X2	A0A8I6A5X2	A0A8I6A5X2_RAT	Usp32	ubiquitinyl hydrolase 1	1	EISCGLSACCR	EISC(UniMod:4)GLSAC(UniMod:4)C(UniMod:4)R	2	EISC(UniMod:4)GLSAC(UniMod:4)C(UniMod:4)R2	3628.04	5007.96	
Q5FVH7	Q5FVH7	MEA1_RAT	Mea1	Male-enhanced antigen 1	1	EISDAQWEDVVQK	EISDAQWEDVVQK	2	EISDAQWEDVVQK2	7389.61	17204.2	15802.5
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	EISDDEAEEEK	EISDDEAEEEK	2	EISDDEAEEEK2	7355.16	3746.25	5924.99
G3V6K6	G3V6K6	G3V6K6_RAT	Egfr	Receptor protein-tyrosine kinase	1	EISDGDVIISGNR	EISDGDVIISGNR	2	EISDGDVIISGNR2	3243.65	4402.64	9407.38
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	EISDSSTPVSR	EISDSSTPVSR	2	EISDSSTPVSR2	170926	195572	182917
D3ZWA1	D3ZWA1	D3ZWA1_RAT	Mindy2	Ubiquitin carboxyl-terminal hydrolase	1	EISEIQR	EISEIQR	2	EISEIQR2	92160.3	94741	96865.3
A0A8I6AC38	A0A8I6AC38	A0A8I6AC38_RAT	Wnk2	non-specific serine/threonine protein kinase	1	EISELQSQQK	EISELQSQQK	2	EISELQSQQK2	2397.04	6089.94	
O35824	O35824	DNJA2_RAT	Dnaja2	DnaJ homolog subfamily A member 2	1	EISFAYEVLSNPEK	EISFAYEVLSNPEK	2	EISFAYEVLSNPEK2	26479.8	22495.5	21986.3
O35824	O35824	DNJA2_RAT	Dnaja2	DnaJ homolog subfamily A member 2	1	EISFAYEVLSNPEK	EISFAYEVLSNPEK	3	EISFAYEVLSNPEK3	3669.32	4940.43	3452.82
O35824	O35824	DNJA2_RAT	Dnaja2	DnaJ homolog subfamily A member 2	1	EISFAYEVLSNPEKR	EISFAYEVLSNPEKR	2	EISFAYEVLSNPEKR2	1925.71	3632.68	
O35824	O35824	DNJA2_RAT	Dnaja2	DnaJ homolog subfamily A member 2	1	EISFAYEVLSNPEKR	EISFAYEVLSNPEKR	3	EISFAYEVLSNPEKR3	51549.1	31176.8	52237.3
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	EISFCSQGIR	EISFC(UniMod:4)SQGIR	2	EISFC(UniMod:4)SQGIR2	35042.3	36130.7	39899.1
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	EISFGTTK	EISFGTTK	1	EISFGTTK1	3099.76	2453.2	
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	EISFGTTK	EISFGTTK	2	EISFGTTK2	369723	329041	332822
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	EISGGNVSPFAPGVSSR	EISGGNVSPFAPGVSSR	2	EISGGNVSPFAPGVSSR2		4875.52	
Q5XIG8	Q5XIG8	STRAP_RAT	Strap	Serine-threonine kinase receptor-associated protein	1	EISGHTSGIK	EISGHTSGIK	2	EISGHTSGIK2	13045	19228.2	18413.2
G3V8Y8	G3V8Y8	G3V8Y8_RAT	Hip1	Huntingtin interacting protein 1	1	EISGLTGQLDNVK	EISGLTGQLDNVK	2	EISGLTGQLDNVK2	9969.13	8091.14	13533.6
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	EISHLNDQWQDLCLQSDK	EISHLNDQWQDLC(UniMod:4)LQSDK	3	EISHLNDQWQDLC(UniMod:4)LQSDK3	2082.24	2556.13	
Q32Q07	Q32Q07	LRRN1_RAT	Lrrn1	Leucine-rich repeat neuronal protein 1	1	EISIHSNPLR	EISIHSNPLR	3	EISIHSNPLR3	22484.8	21418.6	20574.4
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	EISIMQQCDSPHVVK	EISIMQQC(UniMod:4)DSPHVVK	2	EISIMQQC(UniMod:4)DSPHVVK2	1690.57	2929.82	
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	EISIMQQCDSPHVVK	EISIMQQC(UniMod:4)DSPHVVK	3	EISIMQQC(UniMod:4)DSPHVVK3	81183.9	82333	63610.8
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	EISIMQQCDSPYVVK	EISIMQQC(UniMod:4)DSPYVVK	2	EISIMQQC(UniMod:4)DSPYVVK2	41061.4	45078	51773.3
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	EISLNHEWTFEK	EISLNHEWTFEK	3	EISLNHEWTFEK3	23240.7	30075.9	22004.4
Q05982	Q05982	NDKA_RAT	Nme1	Nucleoside diphosphate kinase A	1	EISLWFQPEELVDYK	EISLWFQPEELVDYK	2	EISLWFQPEELVDYK2	12807.1	8858.57	6788.98
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	EISNFEYLMQLNTIAGR	EISNFEYLMQLNTIAGR	3	EISNFEYLMQLNTIAGR3	38143	33583.3	47896.6
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	EISNLVIMR	EISNLVIMR	2	EISNLVIMR2	12040.6	7594.92	16132.4
P47853	P47853	PGS1_RAT	Bgn	Biglycan	1	EISPDTTLLDLQNNDISELR	EISPDTTLLDLQNNDISELR	3	EISPDTTLLDLQNNDISELR3		5643.21	
P47853	P47853	PGS1_RAT	Bgn	Biglycan	1	EISPDTTLLDLQNNDISELRK	EISPDTTLLDLQNNDISELRK	3	EISPDTTLLDLQNNDISELRK3	119141	127491	121943
O35977	O35977	O35977_RAT	Gfra2	GDNF family receptor alpha-2	1	EISPTER	EISPTER	2	EISPTER2	72798.5	87470.3	91048.5
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	EISQFVNKPNLEK	EISQFVNKPNLEK	2	EISQFVNKPNLEK2	3094.62		2274.86
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	EISQFVNKPNLEK	EISQFVNKPNLEK	3	EISQFVNKPNLEK3	53917.2	49332.1	46121.1
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	EISSLTQLTK	EISSLTQLTK	2	EISSLTQLTK2	30650.9	33459.7	29947.2
F7EQT9	F7EQT9	F7EQT9_RAT	Agpat1	1-acyl-sn-glycerol-3-phosphate acyltransferase	1	EISTDGLGGGDCLK	EISTDGLGGGDC(UniMod:4)LK	2	EISTDGLGGGDC(UniMod:4)LK2	56393	59310.8	57708.3
P39052	P39052;P21575;Q08877	DYN2_RAT	Dnm2	Dynamin-2	0	EISYAIK	EISYAIK	2	EISYAIK2	75069.7	73867.7	72449.7
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	EISYLESEMYQLSHLLTEQK	EISYLESEMYQLSHLLTEQK	3	EISYLESEMYQLSHLLTEQK3	7188.6	12938.2	8823.01
P68136	P60711;P63259;A0A8I5Y704;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	EITALAPSTMK	EITALAPSTMK	2	EITALAPSTMK2	197432	168669	189687
P68136	P60711;P63259;A0A8I5Y704;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	EITALAPSTMK	EITALAPSTMK	3	EITALAPSTMK3	35389.5	30199.9	40372.1
P68136	P60711;P63259;A0A8I5Y704;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	EITALAPSTMKIK	EITALAPSTMKIK	3	EITALAPSTMKIK3	8664.4	9374.96	8299.55
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	EITELIAQLHVSSRPEK	EITELIAQLHVSSRPEK	3	EITELIAQLHVSSRPEK3	16736.2	7325.28	23247.8
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	EITELIAQLHVSSRPEK	EITELIAQLHVSSRPEK	4	EITELIAQLHVSSRPEK4	21679.4	17373.3	19436.9
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	EITENLMATGDLDQDGK	EITENLMATGDLDQDGK	2	EITENLMATGDLDQDGK2	8414.42	5901.8	4159.67
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	EITEVGLCHAQDR	EITEVGLC(UniMod:4)HAQDR	2	EITEVGLC(UniMod:4)HAQDR2	56451.9	43333.7	26542
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	EITEVGLCHAQDR	EITEVGLC(UniMod:4)HAQDR	3	EITEVGLC(UniMod:4)HAQDR3	731886	685021	646072
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	EITFENGEELTEEGLPFLILFHMK	EITFENGEELTEEGLPFLILFHMK	3	EITFENGEELTEEGLPFLILFHMK3	4976.09		
Q6AY86	Q6AY86	VP26A_RAT	Vps26a	Vacuolar protein sorting-associated protein 26A	1	EITGIGPSTTTETETIAK	EITGIGPSTTTETETIAK	2	EITGIGPSTTTETETIAK2	21533.5	8331.99	15839.6
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	EITGINDAQILQQALK	EITGINDAQILQQALK	2	EITGINDAQILQQALK2	7106.13	4779.22	1937.64
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	EITHLLCIEPMPHSAIAR	EITHLLC(UniMod:4)IEPMPHSAIAR	3	EITHLLC(UniMod:4)IEPMPHSAIAR3	218218	261640	225985
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	EITHLLCIEPMPHSAIAR	EITHLLC(UniMod:4)IEPMPHSAIAR	4	EITHLLC(UniMod:4)IEPMPHSAIAR4	39447.8	40445.8	28265.2
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	EITISGDK	EITISGDK	1	EITISGDK1	39732.7	36516.4	33921
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	EITISGDK	EITISGDK	2	EITISGDK2	4.50605e+06	4.6593e+06	4.91566e+06
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	EITISGDKAMGK	EITISGDKAMGK	3	EITISGDKAMGK3	6012.81	6948.37	13118.8
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	EITKPLRPMGK	EITKPLRPMGK	3	EITKPLRPMGK3	59016	49463.1	44605.3
Q6AZ50	Q6AZ50	ATG3_RAT	Atg3	Ubiquitin-like-conjugating enzyme ATG3	1	EITLESK	EITLESK	1	EITLESK1	4855.39	1096.32	8680.67
Q7TP53	Q7TP53	Q7TP53_RAT	Il2rg	Ab2-183	1	EITSGCQIQK	EITSGC(UniMod:4)QIQK	2	EITSGC(UniMod:4)QIQK2	10341.5	6334.24	6838.33
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	EITTLVSR	EITTLVSR	2	EITTLVSR2	9670.55	5443.05	3697.76
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	EITWQTLR	EITWQTLR	2	EITWQTLR2	21990.3	20784.8	20954
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	EITWSPSR	EITWSPSR	2	EITWSPSR2	12178.1	9853.46	10789.3
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	EITYSVFYLHK	EITYSVFYLHK	2	EITYSVFYLHK2	1587.49		2211.17
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	EITYSVFYLHK	EITYSVFYLHK	3	EITYSVFYLHK3	17737.2	26711.3	22584.9
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	EIVADSDVMLK	EIVADSDVMLK	2	EIVADSDVMLK2	27232.9	28033.8	31003
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	EIVDAAEDYAK	EIVDAAEDYAK	2	EIVDAAEDYAK2	67877	63782.1	74306.6
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	EIVEGKQNK	EIVEGKQNK	2	EIVEGKQNK2			5270.74
Q9QZ81	Q9QZ81	AGO2_RAT	Ago2	Protein argonaute-2	1	EIVEHMVQHFK	EIVEHMVQHFK	3	EIVEHMVQHFK3	3332.74	4291.87	2820.87
Q5RJS3	Q5RJS3	Q5RJS3_RAT	Ciao2a	Cytosolic iron-sulfur assembly component 2A	1	EIVEQCVLEPD	EIVEQC(UniMod:4)VLEPD	2	EIVEQC(UniMod:4)VLEPD2	7970.09	2789.36	7006.33
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	EIVESCDLK	EIVESC(UniMod:4)DLK	2	EIVESC(UniMod:4)DLK2	45071.2	47100.8	46715.3
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	EIVGVSTIWR	EIVGVSTIWR	2	EIVGVSTIWR2	31303.9	35395.7	32799.8
P85108	P69897;Q4QRB4;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	EIVHIQAGQCGNQIGAK	EIVHIQAGQC(UniMod:4)GNQIGAK	2	EIVHIQAGQC(UniMod:4)GNQIGAK2	212504	193816	202380
P85108	P69897;Q4QRB4;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	EIVHIQAGQCGNQIGAK	EIVHIQAGQC(UniMod:4)GNQIGAK	3	EIVHIQAGQC(UniMod:4)GNQIGAK3	2.39146e+06	2.66067e+06	2.5687e+06
Q4QQV0	Q4QQV0	Q4QQV0_RAT	Tubb6	Tubulin beta chain	1	EIVHIQAGQCGNQIGTK	EIVHIQAGQC(UniMod:4)GNQIGTK	2	EIVHIQAGQC(UniMod:4)GNQIGTK2	2540.95	3508.6	5129.04
Q4QQV0	Q4QQV0	Q4QQV0_RAT	Tubb6	Tubulin beta chain	1	EIVHIQAGQCGNQIGTK	EIVHIQAGQC(UniMod:4)GNQIGTK	3	EIVHIQAGQC(UniMod:4)GNQIGTK3	24750.1	32048.9	24637.1
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	EIVHIQIGQCGNQIGAK	EIVHIQIGQC(UniMod:4)GNQIGAK	2	EIVHIQIGQC(UniMod:4)GNQIGAK2	908555	902746	757405
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	EIVHIQIGQCGNQIGAK	EIVHIQIGQC(UniMod:4)GNQIGAK	3	EIVHIQIGQC(UniMod:4)GNQIGAK3	155336	136578	5.21969e+06
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	EIVHIQIGQCGNQIGAK	EIVHIQIGQC(UniMod:4)GNQIGAK	4	EIVHIQIGQC(UniMod:4)GNQIGAK4	8122.6	9724.72	
Q6P9T8	Q6P9T8;B4F7C2	TBB4B_RAT	Tubb4b	Tubulin beta-4B chain	0	EIVHLQAGQCGNQIGAK	EIVHLQAGQC(UniMod:4)GNQIGAK	3	EIVHLQAGQC(UniMod:4)GNQIGAK3	5.45937e+06	5.87752e+06	6.45598e+06
Q6P9T8	Q6P9T8;B4F7C2	TBB4B_RAT	Tubb4b	Tubulin beta-4B chain	0	EIVHLQAGQCGNQIGAK	EIVHLQAGQC(UniMod:4)GNQIGAK	4	EIVHLQAGQC(UniMod:4)GNQIGAK4	4128.94	6183.23	
Q5HZE4	Q5HZE4	MTNA_RAT	Mri1	Methylthioribose-1-phosphate isomerase	1	EIVIEERPSQELTDLNGVR	EIVIEERPSQELTDLNGVR	3	EIVIEERPSQELTDLNGVR3	13021	4766.94	5877.24
P51583	P51583;A0A0G2K5S4	PUR6_RAT	Paics	Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase	0	EIVLADVIDNDSWR	EIVLADVIDNDSWR	2	EIVLADVIDNDSWR2	28648.7	17859	20194.8
P51583	P51583;A0A0G2K5S4	PUR6_RAT	Paics	Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase	0	EIVLADVIDNDSWR	EIVLADVIDNDSWR	3	EIVLADVIDNDSWR3	6044.78	7465.18	6614.06
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	EIVLPMEQEIAELK	EIVLPMEQEIAELK	2	EIVLPMEQEIAELK2	83652.7	111529	111318
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	EIVLSAGSTPK	EIVLSAGSTPK	2	EIVLSAGSTPK2	247406	269796	276971
Q4FZV0	Q4FZV0	MANBA_RAT	Manba	Beta-mannosidase	1	EIVLSEDR	EIVLSEDR	2	EIVLSEDR2	60078.5	67029.6	63556.1
A0A8I6GF53	M0R838;A0A8I6GF53;A0A8I6AIR7	A0A8I6GF53_RAT	ENSRNOG00000067934	Ig-like domain-containing protein	0	EIVLTQSPTTMAASPGEK	EIVLTQSPTTMAASPGEK	2	EIVLTQSPTTMAASPGEK2	134020	121189	127765
A0A8I6GF53	M0R838;A0A8I6GF53;A0A8I6AIR7	A0A8I6GF53_RAT	ENSRNOG00000067934	Ig-like domain-containing protein	0	EIVLTQSPTTMAASPGEK	EIVLTQSPTTMAASPGEK	3	EIVLTQSPTTMAASPGEK3	135172	124400	124569
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	EIVPYNMAHNAEHEACDLLMEIEQVDMLEK	EIVPYNMAHNAEHEAC(UniMod:4)DLLMEIEQVDMLEK	4	EIVPYNMAHNAEHEAC(UniMod:4)DLLMEIEQVDMLEK4	13799.1	14404.7	16223.8
Q6T5E0	Q6T5E0	Q6T5E0_RAT	Gcnt2	Glucosaminyl (N-acetyl) transferase 2 (I blood group)	1	EIVQYLK	EIVQYLK	2	EIVQYLK2	24805.1	24658.5	25447.6
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	EIVRDLDQDGDK	EIVRDLDQDGDK	2	EIVRDLDQDGDK2	2859.45	2088.33	3278.01
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	EIVRDLDQDGDK	EIVRDLDQDGDK	3	EIVRDLDQDGDK3	14072.7	11653.3	20555.8
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	EIVSDVTDGNEQLSVVR	EIVSDVTDGNEQLSVVR	2	EIVSDVTDGNEQLSVVR2		4815.65	3374
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	EIVSDVTDGNEQLSVVR	EIVSDVTDGNEQLSVVR	3	EIVSDVTDGNEQLSVVR3		3906.46	2366.37
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	EIVSFGSGYGGNSLLGK	EIVSFGSGYGGNSLLGK	2	EIVSFGSGYGGNSLLGK2	54625.4	57705.3	56047.3
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	EIVSGLLAAVSSSK	EIVSGLLAAVSSSK	2	EIVSGLLAAVSSSK2	15682.5	13056	11831.1
Q5XI73	Q5XI73	GDIR1_RAT	Arhgdia	Rho GDP-dissociation inhibitor 1	1	EIVSGMK	EIVSGMK	1	EIVSGMK1	5126.78		2082.72
Q5XI73	Q5XI73	GDIR1_RAT	Arhgdia	Rho GDP-dissociation inhibitor 1	1	EIVSGMK	EIVSGMK	2	EIVSGMK2	279822	289931	305222
E9PTA5	E9PTA5	E9PTA5_RAT	Pign	GPI ethanolamine phosphate transferase 1	1	EIVSIFK	EIVSIFK	2	EIVSIFK2	25445.4	28005.9	32571.6
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	EIVTLIVYNLGTAINTQPNEFDRR	EIVTLIVYNLGTAINTQPNEFDRR	3	EIVTLIVYNLGTAINTQPNEFDRR3	8075.92	8398.05	5249.01
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	EIVTLIVYNLGTAINTQPNEFDRR	EIVTLIVYNLGTAINTQPNEFDRR	4	EIVTLIVYNLGTAINTQPNEFDRR4	6726.02	9090.1	8131.26
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	EIVTNFLAGFEP	EIVTNFLAGFEP	2	EIVTNFLAGFEP2	13368.8	8775.38	
Q62871	Q62871	DC1I2_RAT	Dync1i2	Cytoplasmic dynein 1 intermediate chain 2	1	EIVTYTK	EIVTYTK	1	EIVTYTK1	4624.55	3823.98	2914.46
Q62871	Q62871	DC1I2_RAT	Dync1i2	Cytoplasmic dynein 1 intermediate chain 2	1	EIVTYTK	EIVTYTK	2	EIVTYTK2	154901	202514	190399
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	EIVVIHQDPEALEDIK	EIVVIHQDPEALEDIK	2	EIVVIHQDPEALEDIK2	751.367	2697.55	
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	EIVVIHQDPEALEDIK	EIVVIHQDPEALEDIK	3	EIVVIHQDPEALEDIK3	39555.3	40268.1	37225
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	EIVVLETLEDIDK	EIVVLETLEDIDK	2	EIVVLETLEDIDK2	29623.4	60228.2	38665.1
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	EIVVLGMLR	EIVVLGMLR	2	EIVVLGMLR2	9775.47	11438.9	9513.93
Q68FV8	Q68FV8;A0A8I5ZW20	UBTD1_RAT	Ubtd1	Ubiquitin domain-containing protein 1	0	EIWDALK	EIWDALK	2	EIWDALK2	31366.6	27771.5	28227.5
Q4V8B7	Q4V8B7	HSDL1_RAT	Hsdl1	Inactive hydroxysteroid dehydrogenase-like protein 1	1	EIYAPIR	EIYAPIR	2	EIYAPIR2	205515	151165	225557
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	EIYENMAPGENK	EIYENMAPGENK	2	EIYENMAPGENK2	42544.6	35654.3	38726.1
Q498R3	Q498R3	DJC10_RAT	Dnajc10	DnaJ homolog subfamily C member 10	1	EIYMEIIHNLPDFELLSANK	EIYMEIIHNLPDFELLSANK	3	EIYMEIIHNLPDFELLSANK3		3982.57	
Q641X8	Q641X8;A0A0G2K273	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	0	EIYNEKELLQGK	EIYNEKELLQGK	3	EIYNEKELLQGK3	3979.33	11584.7	9937.56
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	EIYNTIR	EIYNTIR	2	EIYNTIR2	25208.9	23986.8	20418.1
P11240	P11240;A0A8I6A0L0	COX5A_RAT	Cox5a	Cytochrome c oxidase subunit 5A, mitochondrial	0	EIYPYVIQELRPTLNELGISTPEELGLDKV	EIYPYVIQELRPTLNELGISTPEELGLDKV	4	EIYPYVIQELRPTLNELGISTPEELGLDKV4	32327.2	33980.3	27138.9
O35162	O35162	HSP13_RAT	Hspa13	Heat shock 70 kDa protein 13	1	EIYQTYGFLPSR	EIYQTYGFLPSR	2	EIYQTYGFLPSR2	16887.2	15679.6	10310.6
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	EIYSDTLESTPMLEK	EIYSDTLESTPMLEK	2	EIYSDTLESTPMLEK2	47634.6	40089.2	43561.8
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	EIYSDTLESTPMLEK	EIYSDTLESTPMLEK	3	EIYSDTLESTPMLEK3	15812.4	25075.7	23336.2
P04897	P10824;P04897	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	0	EIYTHFTCATDTK	EIYTHFTC(UniMod:4)ATDTK	2	EIYTHFTC(UniMod:4)ATDTK2	18930.9	15545.2	15240.3
P04897	P10824;P04897	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	0	EIYTHFTCATDTK	EIYTHFTC(UniMod:4)ATDTK	3	EIYTHFTC(UniMod:4)ATDTK3	255356	345981	389388
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	EIYTNLGPR	EIYTNLGPR	2	EIYTNLGPR2	70312.8	85418.4	64424.8
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	EIYTSNHIWK	EIYTSNHIWK	3	EIYTSNHIWK3	18298.6	10189	9342.71
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	EIYTSNHMWK	EIYTSNHMWK	2	EIYTSNHMWK2	6758.46	5814.5	8074.49
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	EIYTSNHMWK	EIYTSNHMWK	3	EIYTSNHMWK3	42616.6	38307.6	31821.9
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	EKAEGDAAALNR	EKAEGDAAALNR	3	EKAEGDAAALNR3	20239.2	25573.3	22104.6
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	EKAEGDAAALNRR	EKAEGDAAALNRR	3	EKAEGDAAALNRR3	6814.18		23748.3
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	EKAPSIIFIDELDAIGTK	EKAPSIIFIDELDAIGTK	3	EKAPSIIFIDELDAIGTK3	50307	43726.3	49636.5
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	EKAPSIIFIDELDAIGTKR	EKAPSIIFIDELDAIGTKR	3	EKAPSIIFIDELDAIGTKR3	4666.26	4655.98	1738.83
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	EKAPSIIFIDELDAIGTKR	EKAPSIIFIDELDAIGTKR	4	EKAPSIIFIDELDAIGTKR4	8314.02	3358.74	5247.54
Q6AY17	Q6AY17	AB17B_RAT	Abhd17b	Alpha/beta hydrolase domain-containing protein 17B	1	EKDAIECFMTR	EKDAIEC(UniMod:4)FMTR	2	EKDAIEC(UniMod:4)FMTR2	2753.15	1676.16	
Q6AY17	Q6AY17	AB17B_RAT	Abhd17b	Alpha/beta hydrolase domain-containing protein 17B	1	EKDAIECFMTR	EKDAIEC(UniMod:4)FMTR	3	EKDAIEC(UniMod:4)FMTR3	16021.4	8724.24	12759
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	EKDCVYGFK	EKDC(UniMod:4)VYGFK	2	EKDC(UniMod:4)VYGFK2	14056.7	13124.2	13470.9
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	EKDCVYGFK	EKDC(UniMod:4)VYGFK	3	EKDC(UniMod:4)VYGFK3	65682	64110.7	71010.8
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	EKDFIILSCVR	EKDFIILSC(UniMod:4)VR	3	EKDFIILSC(UniMod:4)VR3	6822.91	10219.7	4516.62
Q6P9U8	Q6P9U8	EIF3H_RAT	Eif3h	Eukaryotic translation initiation factor 3 subunit H	1	EKDFSPEALK	EKDFSPEALK	3	EKDFSPEALK3		10629.2	21603.1
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	EKDGFGTVLFSSHVR	EKDGFGTVLFSSHVR	4	EKDGFGTVLFSSHVR4	10146.9	10999.8	17570.6
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	EKDIEIDALSQK	EKDIEIDALSQK	2	EKDIEIDALSQK2	1322.69		1076.79
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	EKDIEIDALSQK	EKDIEIDALSQK	3	EKDIEIDALSQK3	9945.32	8279.07	6624.17
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	EKDIEMFLESSR	EKDIEMFLESSR	2	EKDIEMFLESSR2		7390.15	2505.12
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	EKDIEMFLESSR	EKDIEMFLESSR	3	EKDIEMFLESSR3	31834.7	67960.1	50251
P30839	P30839	AL3A2_RAT	Aldh3a2	Aldehyde dehydrogenase family 3 member A2	1	EKDILAAIAADLSK	EKDILAAIAADLSK	2	EKDILAAIAADLSK2	10253.9	1703.78	3573.26
P30839	P30839	AL3A2_RAT	Aldh3a2	Aldehyde dehydrogenase family 3 member A2	1	EKDILAAIAADLSK	EKDILAAIAADLSK	3	EKDILAAIAADLSK3	23559.7	19193.1	15041.7
A0A8I5ZN24	A0A8I5ZN24	A0A8I5ZN24_RAT	Dhrs7	Dehydrogenase/reductase 7	1	EKDILVLPLDLTDTSSHEAATK	EKDILVLPLDLTDTSSHEAATK	4	EKDILVLPLDLTDTSSHEAATK4	10887.4	7063.83	8962.07
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	EKDIVIK	EKDIVIK	2	EKDIVIK2	7750.02	8282.92	6974.18
Q6AYF8	Q6AYF8	Q6AYF8_RAT	Serpinb9	Serpin family B member 9	1	EKDLHQGFQLLLSNLNKPER	EKDLHQGFQLLLSNLNKPER	4	EKDLHQGFQLLLSNLNKPER4	4570.07	5573.75	7975.07
Q66HA6	D3ZPP2;Q66HA6	ARL8B_RAT	Arl8b	ADP-ribosylation factor-like protein 8B	0	EKDNIDITLQWLIQHSK	EKDNIDITLQWLIQHSK	3	EKDNIDITLQWLIQHSK3	36753	38506.4	19214.6
Q66HA6	D3ZPP2;Q66HA6	ARL8B_RAT	Arl8b	ADP-ribosylation factor-like protein 8B	0	EKDNIDITLQWLIQHSK	EKDNIDITLQWLIQHSK	4	EKDNIDITLQWLIQHSK4	64936.7	48756.6	37363.1
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	EKDPDMFCDPFTSSSTTANK	EKDPDMFC(UniMod:4)DPFTSSSTTANK	3	EKDPDMFC(UniMod:4)DPFTSSSTTANK3	33678.8	38515	36274.1
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	EKDQTPLAVYNSISYK	EKDQTPLAVYNSISYK	3	EKDQTPLAVYNSISYK3	44947.3	40137.2	31516.5
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	EKDRDPEAQFEMPYVVR	EKDRDPEAQFEMPYVVR	3	EKDRDPEAQFEMPYVVR3	21836.2	15157.9	24733.1
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	EKDRDPEAQFEMPYVVR	EKDRDPEAQFEMPYVVR	4	EKDRDPEAQFEMPYVVR4	53699.9	53796	55409.1
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	EKDRVEEMAANSTAVEDITK	EKDRVEEMAANSTAVEDITK	3	EKDRVEEMAANSTAVEDITK3	2795.99	4216.58	564.699
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	EKDRVEEMAANSTAVEDITK	EKDRVEEMAANSTAVEDITK	4	EKDRVEEMAANSTAVEDITK4	10700.9	17319.9	6163.8
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	EKDSSLVQLSESK	EKDSSLVQLSESK	2	EKDSSLVQLSESK2		3169.92	5371.52
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	EKDTAGVIR	EKDTAGVIR	2	EKDTAGVIR2	11696.3	12932.2	8880.11
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	EKDVENPDEPR	EKDVENPDEPR	2	EKDVENPDEPR2	3357.85		3778.17
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	EKDVENPDEPR	EKDVENPDEPR	3	EKDVENPDEPR3	16978.3		11293
Q4KLL4	Q4KLL4	TM9S4_RAT	Tm9sf4	Transmembrane 9 superfamily member 4	1	EKDVQFEHGYR	EKDVQFEHGYR	3	EKDVQFEHGYR3	3037.99	2114.54	3458.23
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	EKDVYRYVR	EKDVYRYVR	3	EKDVYRYVR3	79905.6	156465	134400
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	EKEAGLQMFGQLAR	EKEAGLQMFGQLAR	3	EKEAGLQMFGQLAR3	20343.9	33792.1	28468.8
D3ZGS3	D3ZGS3	OCRL_RAT	Ocrl	Inositol polyphosphate 5-phosphatase OCRL	1	EKEALNK	EKEALNK	2	EKEALNK2	397691		130862
Q6AYS6	Q6AYS6	SNX17_RAT	Snx17	Sorting nexin-17	1	EKEDGAFSFVR	EKEDGAFSFVR	3	EKEDGAFSFVR3	10810.7	12814.5	11085.6
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	EKEEEEQR	EKEEEEQR	2	EKEEEEQR2			1817.74
Q9JJP9	Q9JJP9	UBQL1_RAT	Ubqln1	Ubiquilin-1	1	EKEEFAVPENSSVQQFK	EKEEFAVPENSSVQQFK	3	EKEEFAVPENSSVQQFK3	14741.5	14015.2	7490.17
Q63692	Q63692	CDC37_RAT	Cdc37	Hsp90 co-chaperone Cdc37	1	EKEELDR	EKEELDR	2	EKEELDR2			225489
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	EKEELELLK	EKEELELLK	2	EKEELELLK2	8404.23	4826.94	5364.75
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	EKEELEQR	EKEELEQR	2	EKEELEQR2	29627		83229.3
B2RYM5	B2RYM5	BRCC3_RAT	Brcc3	Lys-63-specific deubiquitinase BRCC36	1	EKEELMAELR	EKEELMAELR	3	EKEELMAELR3	60020.3	48774.4	51503.9
O35763	O35763	MOES_RAT	Msn	Moesin	1	EKEELMEK	EKEELMEK	2	EKEELMEK2	15002	13545	12711.9
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	EKEEQQLQGNINQLK	EKEEQQLQGNINQLK	2	EKEEQQLQGNINQLK2	2290.29	3508.92	
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	EKEEQQLQGNINQLK	EKEEQQLQGNINQLK	3	EKEEQQLQGNINQLK3	11900.7	12845.7	12848.6
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	EKEESLQLHQEAWER	EKEESLQLHQEAWER	3	EKEESLQLHQEAWER3	2167.14	2321.1	
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	EKEESLQLHQEAWER	EKEESLQLHQEAWER	4	EKEESLQLHQEAWER4	4722.31	8285.57	2604.03
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	EKEFECHSMR	EKEFEC(UniMod:4)HSMR	3	EKEFEC(UniMod:4)HSMR3		6259.75	5490.12
Q6AXX6	Q6AXX6	PXL2A_RAT	Prxl2a	Peroxiredoxin-like 2A	1	EKEFGDR	EKEFGDR	2	EKEFGDR2	11374.2		7794.79
O70257	O70257	STX7_RAT	Stx7	Syntaxin-7	1	EKEFVAR	EKEFVAR	2	EKEFVAR2	30641.7	22360.8	27773.7
B2GV55	B2GV55	B2GV55_RAT	Ube2q1	Ubiquitin conjugating enzyme E2 Q1	1	EKEGADFILLNFSFK	EKEGADFILLNFSFK	3	EKEGADFILLNFSFK3	7987.23	3083.54	
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	EKEGESSGSQEDQLCTALVNQLNR	EKEGESSGSQEDQLC(UniMod:4)TALVNQLNR	3	EKEGESSGSQEDQLC(UniMod:4)TALVNQLNR3	2784.71	2772.58	4249.85
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	EKEHEALQK	EKEHEALQK	2	EKEHEALQK2			4550.5
A0A0G2K1L5	A0A0G2K1L5	A0A0G2K1L5_RAT	Reep2	Receptor expression-enhancing protein	1	EKEIDEYITQAR	EKEIDEYITQAR	2	EKEIDEYITQAR2	21673.7	20666.9	18261.8
A0A0G2K1L5	A0A0G2K1L5	A0A0G2K1L5_RAT	Reep2	Receptor expression-enhancing protein	1	EKEIDEYITQAR	EKEIDEYITQAR	3	EKEIDEYITQAR3	174485	228111	220684
D3ZY71	D3ZY71	D3ZY71_RAT	Triap1	TP53 regulated inhibitor of apoptosis 1	1	EKEIPIEGLEFMGHGK	EKEIPIEGLEFMGHGK	3	EKEIPIEGLEFMGHGK3	6343.52	12586.5	4381.38
D3ZY71	D3ZY71	D3ZY71_RAT	Triap1	TP53 regulated inhibitor of apoptosis 1	1	EKEIPIEGLEFMGHGK	EKEIPIEGLEFMGHGK	4	EKEIPIEGLEFMGHGK4	2544.79	4236.94	4671.81
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	EKEISDDEAEEEK	EKEISDDEAEEEK	3	EKEISDDEAEEEK3	5125.21	9545.43	
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	EKEITDLCNELESLK	EKEITDLC(UniMod:4)NELESLK	3	EKEITDLC(UniMod:4)NELESLK3	5630.07	4796.41	14585.1
Q6AYK6	Q6AYK6	CYBP_RAT	Cacybp	Calcyclin-binding protein	1	EKEKPSYDTEADPSEGLMNVLK	EKEKPSYDTEADPSEGLMNVLK	3	EKEKPSYDTEADPSEGLMNVLK3	4038.06	4677.7	
Q6AYK6	Q6AYK6	CYBP_RAT	Cacybp	Calcyclin-binding protein	1	EKEKPSYDTEADPSEGLMNVLK	EKEKPSYDTEADPSEGLMNVLK	4	EKEKPSYDTEADPSEGLMNVLK4	5761.25	7347.06	10414.5
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	EKELETGPK	EKELETGPK	2	EKELETGPK2	77588.6		58793.3
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	EKENLSYDLVPMK	EKENLSYDLVPMK	2	EKENLSYDLVPMK2	9099.7	11368.6	10702.9
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	EKENLSYDLVPMK	EKENLSYDLVPMK	3	EKENLSYDLVPMK3	74689.5	81085.6	69254.4
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	EKENQINSFGK	EKENQINSFGK	2	EKENQINSFGK2	5721.96	4322.19	2364.08
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	EKENQINSFGK	EKENQINSFGK	3	EKENQINSFGK3	67832.7	65536.7	58647.8
P51111	P51111	HD_RAT	Htt	Huntingtin	1	EKEPGEQTSTPMSPK	EKEPGEQTSTPMSPK	2	EKEPGEQTSTPMSPK2	3741.8	4947.89	3835.64
P51111	P51111	HD_RAT	Htt	Huntingtin	1	EKEPGEQTSTPMSPK	EKEPGEQTSTPMSPK	3	EKEPGEQTSTPMSPK3	32126.9	38262.3	36396.6
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EKEPIAASTNR	EKEPIAASTNR	2	EKEPIAASTNR2	205736	126709	207213
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EKEPIAASTNR	EKEPIAASTNR	3	EKEPIAASTNR3	606509	475055	773133
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EKEPIVGSTDYGK	EKEPIVGSTDYGK	2	EKEPIVGSTDYGK2	129938	123101	133109
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EKEPIVGSTDYGK	EKEPIVGSTDYGK	3	EKEPIVGSTDYGK3	525407	597658	563843
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EKEPIVGSTDYGKDEDSAEALLK	EKEPIVGSTDYGKDEDSAEALLK	3	EKEPIVGSTDYGKDEDSAEALLK3	18311.7	17476	17316.4
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EKEPIVGSTDYGKDEDSAEALLK	EKEPIVGSTDYGKDEDSAEALLK	4	EKEPIVGSTDYGKDEDSAEALLK4	14802.6	25575.8	18515.9
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	EKEQCCASLAAGLPHFSSGLFR	EKEQC(UniMod:4)C(UniMod:4)ASLAAGLPHFSSGLFR	4	EKEQC(UniMod:4)C(UniMod:4)ASLAAGLPHFSSGLFR4	9461.31	8983.86	13819.2
Q6AY97	Q6AY97	CCD91_RAT	Ccdc91	Coiled-coil domain-containing protein 91	1	EKEQDAVSFQAR	EKEQDAVSFQAR	3	EKEQDAVSFQAR3	7377.99	11290.8	7012.96
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	EKEQISEQLCALNK	EKEQISEQLC(UniMod:4)ALNK	3	EKEQISEQLC(UniMod:4)ALNK3	8263.4	7011.15	2847.24
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	EKEQIYSSLDYGK	EKEQIYSSLDYGK	2	EKEQIYSSLDYGK2	1019.02	3164.08	3949.73
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	EKEQIYSSLDYGK	EKEQIYSSLDYGK	3	EKEQIYSSLDYGK3	14414.2	25355.4	26887.1
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EKEQLMASDDFGR	EKEQLMASDDFGR	2	EKEQLMASDDFGR2	29196.7	21519.5	22573.3
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EKEQLMASDDFGR	EKEQLMASDDFGR	3	EKEQLMASDDFGR3	252941	262013	285927
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EKEQLMASDDFGRDLASVQALLR	EKEQLMASDDFGRDLASVQALLR	4	EKEQLMASDDFGRDLASVQALLR4	44929.6	42478.8	37997.8
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	EKEQLQTEK	EKEQLQTEK	2	EKEQLQTEK2			7037.33
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	EKESLQQLAEVTR	EKESLQQLAEVTR	2	EKESLQQLAEVTR2	21025.5	25507.8	21175.3
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	EKESLQQLAEVTR	EKESLQQLAEVTR	3	EKESLQQLAEVTR3	388782	425175	469135
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	EKETEVQSLK	EKETEVQSLK	3	EKETEVQSLK3	14710.4		20883.9
D3ZVB7	D3ZVB7	D3ZVB7_RAT	Ogn	Osteoglycin	1	EKETMIIPDEK	EKETMIIPDEK	2	EKETMIIPDEK2	13605.9	6582.36	9763.01
D3ZVB7	D3ZVB7	D3ZVB7_RAT	Ogn	Osteoglycin	1	EKETMIIPDEK	EKETMIIPDEK	3	EKETMIIPDEK3	31165.5	46499.4	46070.2
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	EKEVAQK	EKEVAQK	1	EKEVAQK1	23400.3		17080.5
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	EKEVAQK	EKEVAQK	2	EKEVAQK2	433511		757404
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	EKEYSVLNAVDQAR	EKEYSVLNAVDQAR	2	EKEYSVLNAVDQAR2	6028.86	3790.7	4621.36
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	EKEYSVLNAVDQAR	EKEYSVLNAVDQAR	3	EKEYSVLNAVDQAR3	20133.8	22149.7	24246.5
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	EKFNQNMEGLK	EKFNQNMEGLK	3	EKFNQNMEGLK3	7903.28	12730.5	8196.73
Q6P752	Q6P752	TOIP2_RAT	Tor1aip2	Torsin-1A-interacting protein 2	1	EKFPGQSAFLWQR	EKFPGQSAFLWQR	3	EKFPGQSAFLWQR3	7104.4		3752.92
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	EKGVELSDVKR	EKGVELSDVKR	3	EKGVELSDVKR3	34709.9	21378.3	14432.2
Q6AYQ8	Q6AYQ8	FAHD1_RAT	Fahd1	Acylpyruvase FAHD1, mitochondrial	1	EKIPDPHALR	EKIPDPHALR	3	EKIPDPHALR3	12512.5	12364.7	20881.1
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	EKIPQLDELNQTGQILQEQMGK	EKIPQLDELNQTGQILQEQMGK	3	EKIPQLDELNQTGQILQEQMGK3	61169.6	55325.1	55898
P68136	P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	EKLCYVALDFENEMATAASSSSLEK	EKLC(UniMod:4)YVALDFENEMATAASSSSLEK	3	EKLC(UniMod:4)YVALDFENEMATAASSSSLEK3	11050.7	14258.5	12530.3
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	EKLILPHVDVQLK	EKLILPHVDVQLK	4	EKLILPHVDVQLK4	2262.17	6935.35	3802.85
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	EKLPANQYTWSSR	EKLPANQYTWSSR	2	EKLPANQYTWSSR2	9005.86	6970.92	11050.6
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	EKLPANQYTWSSR	EKLPANQYTWSSR	3	EKLPANQYTWSSR3	36907.6	34270.7	39927.7
Q5RK09	Q5RK09	EIF3G_RAT	Eif3g	Eukaryotic translation initiation factor 3 subunit G	1	EKLPGELEPVQAAQNK	EKLPGELEPVQAAQNK	2	EKLPGELEPVQAAQNK2	8501.24	4691.16	8099.04
Q5RK09	Q5RK09	EIF3G_RAT	Eif3g	Eukaryotic translation initiation factor 3 subunit G	1	EKLPGELEPVQAAQNK	EKLPGELEPVQAAQNK	3	EKLPGELEPVQAAQNK3	49193.3	46510.6	45592.3
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	EKLPQFPFSIDQEGNIYVTQPLDR	EKLPQFPFSIDQEGNIYVTQPLDR	3	EKLPQFPFSIDQEGNIYVTQPLDR3	19589.4	18280.3	12011.2
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	EKLPQFPFSIDQEGNIYVTQPLDREEK	EKLPQFPFSIDQEGNIYVTQPLDREEK	4	EKLPQFPFSIDQEGNIYVTQPLDREEK4	61313.9	72408.5	55611.6
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	EKLPQPVQVDPVTHCK	EKLPQPVQVDPVTHC(UniMod:4)K	2	EKLPQPVQVDPVTHC(UniMod:4)K2	12139.5	10383.1	6581.96
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	EKLPQPVQVDPVTHCK	EKLPQPVQVDPVTHC(UniMod:4)K	3	EKLPQPVQVDPVTHC(UniMod:4)K3	261972	241546	236840
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	EKLPQPVQVDPVTHCK	EKLPQPVQVDPVTHC(UniMod:4)K	4	EKLPQPVQVDPVTHC(UniMod:4)K4	510331	563666	577486
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	EKNPDMVAGEK	EKNPDMVAGEK	2	EKNPDMVAGEK2	66091.1	84168.8	59576
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	EKNPDMVAGEK	EKNPDMVAGEK	3	EKNPDMVAGEK3	254958	311930	242040
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	EKNPLLYLTGIQTDK	EKNPLLYLTGIQTDK	2	EKNPLLYLTGIQTDK2	47607.7	44370	27983.8
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	EKNPLLYLTGIQTDK	EKNPLLYLTGIQTDK	3	EKNPLLYLTGIQTDK3	25674.6	37234.5	33923.3
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	EKNPNQEPIPIVLR	EKNPNQEPIPIVLR	3	EKNPNQEPIPIVLR3	147483	135159	179063
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	EKPAGSIDSYLK	EKPAGSIDSYLK	2	EKPAGSIDSYLK2	55363.2	64054.1	54072.6
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	EKPAGSIDSYLK	EKPAGSIDSYLK	3	EKPAGSIDSYLK3	219970	231140	232432
A0A8I6ANF5	A0A8I6ANF5	A0A8I6ANF5_RAT	Dffa	DNA fragmentation factor subunit alpha	1	EKPAPELSLSSQDLEVGKN	EKPAPELSLSSQDLEVGKN	3	EKPAPELSLSSQDLEVGKN3	14255	11206.9	15454.5
Q80W89	Q80W89	NDUAB_RAT	Ndufa11	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11	1	EKPDDPLNYFIGGCAGGLTLGAR	EKPDDPLNYFIGGC(UniMod:4)AGGLTLGAR	3	EKPDDPLNYFIGGC(UniMod:4)AGGLTLGAR3	12832.2	13929.2	15300.4
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	EKPEEESFVEPAWLVQLQHVER	EKPEEESFVEPAWLVQLQHVER	4	EKPEEESFVEPAWLVQLQHVER4	17590.3	13775.3	10492
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	EKPFLFNLDDESIR	EKPFLFNLDDESIR	2	EKPFLFNLDDESIR2	13664.1	9195.72	9773.02
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	EKPFLFNLDDESIR	EKPFLFNLDDESIR	3	EKPFLFNLDDESIR3	73490.2	53226.9	61307.2
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	EKPGVESMR	EKPGVESMR	2	EKPGVESMR2	123873	179834	133521
P30839	P30839	AL3A2_RAT	Aldh3a2	Aldehyde dehydrogenase family 3 member A2	1	EKPLALYIFSHNNK	EKPLALYIFSHNNK	3	EKPLALYIFSHNNK3	33045.1	32868.8	31990.2
P30839	P30839	AL3A2_RAT	Aldh3a2	Aldehyde dehydrogenase family 3 member A2	1	EKPLALYIFSHNNK	EKPLALYIFSHNNK	4	EKPLALYIFSHNNK4	20377.5	22377.2	48110.8
D3ZRN5	D3ZRN5	D3ZRN5_RAT	Ro60	Ro60, Y RNA binding protein	1	EKPLSVETDK	EKPLSVETDK	3	EKPLSVETDK3	7503.99	3739.95	6029.14
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	EKPLVQEK	EKPLVQEK	1	EKPLVQEK1	1922.12	1269.86	
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	EKPLVQEK	EKPLVQEK	2	EKPLVQEK2	1.08819e+06	860189	1.07504e+06
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	EKPMLQSR	EKPMLQSR	2	EKPMLQSR2	44074.4	40377	42190.7
O08618	O08618;Q63468	KPRB_RAT	Prpsap2	Phosphoribosyl pyrophosphate synthase-associated protein 2	0	EKPPITVVGDVGGR	EKPPITVVGDVGGR	3	EKPPITVVGDVGGR3	43003.6	57185.9	52654.7
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	EKPQPIPYVYGSR	EKPQPIPYVYGSR	2	EKPQPIPYVYGSR2	42242.9	34276.3	36447.2
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	EKPQPIPYVYGSR	EKPQPIPYVYGSR	3	EKPQPIPYVYGSR3	154678	127948	163969
M0RCS2	M0RCS2	M0RCS2_RAT	Tbl2	Transducin (beta)-like 2	1	EKPQQHNFTHPLLAAALK	EKPQQHNFTHPLLAAALK	4	EKPQQHNFTHPLLAAALK4	5176.35	5384.31	6611.56
Q3KR92	Q3KR92	TPST1_RAT	Tpst1	Protein-tyrosine sulfotransferase 1	1	EKPQTEQVE	EKPQTEQVE	2	EKPQTEQVE2	5406.76		1717.51
Q6AYK6	Q6AYK6	CYBP_RAT	Cacybp	Calcyclin-binding protein	1	EKPSYDTEADPSEGLMNVLK	EKPSYDTEADPSEGLMNVLK	3	EKPSYDTEADPSEGLMNVLK3	44455.9	33385	30837.3
Q6AYK6	Q6AYK6	CYBP_RAT	Cacybp	Calcyclin-binding protein	1	EKPSYDTEADPSEGLMNVLKK	EKPSYDTEADPSEGLMNVLKK	3	EKPSYDTEADPSEGLMNVLKK3	4016.38		5055.09
Q6AYK6	Q6AYK6	CYBP_RAT	Cacybp	Calcyclin-binding protein	1	EKPSYDTEADPSEGLMNVLKK	EKPSYDTEADPSEGLMNVLKK	4	EKPSYDTEADPSEGLMNVLKK4	13657.6	19934.7	18674.4
Q5M9G3	Q5M9G3	CAPR1_RAT	Caprin1	Caprin-1	1	EKPVCGTTYK	EKPVC(UniMod:4)GTTYK	2	EKPVC(UniMod:4)GTTYK2	57179.3		44408.8
Q6IMY8	Q6IMY8	HNRPU_RAT	Hnrnpu	Heterogeneous nuclear ribonucleoprotein U	1	EKPYFPIPEDCTFIQNVPLEDR	EKPYFPIPEDC(UniMod:4)TFIQNVPLEDR	3	EKPYFPIPEDC(UniMod:4)TFIQNVPLEDR3	4183.23	2613.68	3232.02
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	EKQPVAGSEGAQYR	EKQPVAGSEGAQYR	2	EKQPVAGSEGAQYR2	22194.7	16479.6	21325.8
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	EKQPVAGSEGAQYR	EKQPVAGSEGAQYR	3	EKQPVAGSEGAQYR3	48214	40571.3	64520.5
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	EKSPPDQSAVPNTPPSTPVK	EKSPPDQSAVPNTPPSTPVK	3	EKSPPDQSAVPNTPPSTPVK3	56276.5	73691.9	56108.9
Q6P9X9	Q6P9X9	PARM1_RAT	Parm1	Prostate androgen-regulated mucin-like protein 1 homolog	1	EKSPQDTEPGK	EKSPQDTEPGK	2	EKSPQDTEPGK2			2067.73
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	EKTPLIDLCDGQAEQAAK	EKTPLIDLC(UniMod:4)DGQAEQAAK	3	EKTPLIDLC(UniMod:4)DGQAEQAAK3	43193.5	56383.8	54403.8
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	EKVPSPHLNQLVILTSGDTLYGLAER	EKVPSPHLNQLVILTSGDTLYGLAER	4	EKVPSPHLNQLVILTSGDTLYGLAER4	3989.95	5798.23	
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	EKYPNLQVIGGNVVTAAQAK	EKYPNLQVIGGNVVTAAQAK	3	EKYPNLQVIGGNVVTAAQAK3	46530.3	33355.6	56454.4
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	ELAACQLR	ELAAC(UniMod:4)QLR	2	ELAAC(UniMod:4)QLR2	139531	121529	135117
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	ELAAEDEQVFLMK	ELAAEDEQVFLMK	2	ELAAEDEQVFLMK2	20048.1	18845.5	16685.1
D4A3I5	D4A3I5;F7FI79	D4A3I5_RAT	Fhip2a	FHF complex subunit HOOK interacting protein 2A	0	ELAAIAFVK	ELAAIAFVK	2	ELAAIAFVK2	16122.8	11684.6	7898.35
Q5RJR8	Q5RJR8	LRC59_RAT	Lrrc59	Leucine-rich repeat-containing protein 59	1	ELAALPK	ELAALPK	1	ELAALPK1	8420.15		6594.31
D3Z979	D3Z979	D3Z979_RAT	Man1c1	alpha-1,2-Mannosidase	1	ELAAQITR	ELAAQITR	2	ELAAQITR2	3969.5		4060.89
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	ELAAQTIK	ELAAQTIK	1	ELAAQTIK1	852977	797735	655647
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	ELAAQTIK	ELAAQTIK	2	ELAAQTIK2	101253	102299	82687.8
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	ELAAQTIKK	ELAAQTIKK	2	ELAAQTIKK2	3.73073e+06	4.32212e+06	3.63087e+06
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	ELACDDPETEHVALIAVDYLNK	ELAC(UniMod:4)DDPETEHVALIAVDYLNK	3	ELAC(UniMod:4)DDPETEHVALIAVDYLNK3	175593	161533	7.89429e+06
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	ELACDDPETEHVALIAVDYLNK	ELAC(UniMod:4)DDPETEHVALIAVDYLNK	4	ELAC(UniMod:4)DDPETEHVALIAVDYLNK4	78294.5	73615.7	86616.2
O88917	O88917	AGRL1_RAT	Adgrl1	Adhesion G protein-coupled receptor L1	1	ELACEGYPIELR	ELAC(UniMod:4)EGYPIELR	2	ELAC(UniMod:4)EGYPIELR2		2541.45	3203.53
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	ELADDVVGSVLDCFSFQETDK	ELADDVVGSVLDC(UniMod:4)FSFQETDK	3	ELADDVVGSVLDC(UniMod:4)FSFQETDK3	2149.66		4136.76
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	ELADENK	ELADENK	1	ELADENK1	39397.6		6933.99
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	ELADENK	ELADENK	2	ELADENK2	486093		276384
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	ELADENQTLK	ELADENQTLK	2	ELADENQTLK2	35530.4	28006.1	23065.6
D3ZYR1	D3ZYR1	FCHO2_RAT	Fcho2	F-BAR domain only protein 2	1	ELADFVR	ELADFVR	2	ELADFVR2	95645.3	84994.5	81103.6
P05065	P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	1	ELADIAHR	ELADIAHR	2	ELADIAHR2	58299.3	35623.1	43079.1
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	ELADLEEENR	ELADLEEENR	2	ELADLEEENR2	150965	148118	181968
A0A8I5ZU93	A0A8I5ZU93	A0A8I5ZU93_RAT	Cops7a	COP9 signalosome subunit 7A	1	ELADSDFASTFR	ELADSDFASTFR	2	ELADSDFASTFR2	16754.2	9393.01	19940
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	ELADVLMDPPMDDQPGMER	ELADVLMDPPMDDQPGMER	3	ELADVLMDPPMDDQPGMER3	26174.1	26998.9	22471.2
P29419	P29419	ATP5I_RAT	Atp5me	ATP synthase subunit e, mitochondrial	1	ELAEAEDVSIFK	ELAEAEDVSIFK	2	ELAEAEDVSIFK2	404264	384967	395779
A0A8I5ZU42	A0A8I5ZU42	A0A8I5ZU42_RAT	ENSRNOG00000064024	THIF-type NAD/FAD binding fold domain-containing protein	1	ELAEAVSGGR	ELAEAVSGGR	2	ELAEAVSGGR2	17773.2	12275.6	14143.8
P62909	P62909	RS3_RAT	Rps3	Small ribosomal subunit protein uS3	1	ELAEDGYSGVEVR	ELAEDGYSGVEVR	2	ELAEDGYSGVEVR2	6349.63	7436.08	5009.46
A0A8I6AE36	A0A8I6AE36;Q9QYU1	A0A8I6AE36_RAT	ENSRNOG00000067472	Peroxisomal biogenesis factor 19	0	ELAEEEPHLVEQFQK	ELAEEEPHLVEQFQK	2	ELAEEEPHLVEQFQK2	2089.58		
A0A8I6AE36	A0A8I6AE36;Q9QYU1	A0A8I6AE36_RAT	ENSRNOG00000067472	Peroxisomal biogenesis factor 19	0	ELAEEEPHLVEQFQK	ELAEEEPHLVEQFQK	3	ELAEEEPHLVEQFQK3	39053.2	36861.8	44647.8
D3ZYF5	D3ZYF5	D3ZYF5_RAT	Trim58	Tripartite motif-containing 58	1	ELAEELEEMSQRPAVALLEGAR	ELAEELEEMSQRPAVALLEGAR	3	ELAEELEEMSQRPAVALLEGAR3	15452.5		17612.4
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	ELAELWHNQEELLQR	ELAELWHNQEELLQR	3	ELAELWHNQEELLQR3	9400.7	7763.29	8504.16
P30427	P30427	PLEC_RAT	Plec	Plectin	1	ELAEQELEK	ELAEQELEK	2	ELAEQELEK2	2191.43	3272.84	862.16
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	ELAEQELR	ELAEQELR	2	ELAEQELR2	39569.4	36986.5	32493.2
Q5RK09	Q5RK09	EIF3G_RAT	Eif3g	Eukaryotic translation initiation factor 3 subunit G	1	ELAEQLGLSTGEK	ELAEQLGLSTGEK	2	ELAEQLGLSTGEK2	86230.3	80216.6	84900.2
Q5RK09	Q5RK09	EIF3G_RAT	Eif3g	Eukaryotic translation initiation factor 3 subunit G	1	ELAEQLGLSTGEKEK	ELAEQLGLSTGEKEK	3	ELAEQLGLSTGEKEK3	17528.6	18316.2	21023.3
Q5RK09	Q5RK09	EIF3G_RAT	Eif3g	Eukaryotic translation initiation factor 3 subunit G	1	ELAEQLGLSTGEKEKLPGELEPVQAAQNK	ELAEQLGLSTGEKEKLPGELEPVQAAQNK	4	ELAEQLGLSTGEKEKLPGELEPVQAAQNK4	10963.1	12687.9	9203.11
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	ELAEQTLNNVK	ELAEQTLNNVK	2	ELAEQTLNNVK2	24515.3	26580.1	30944.9
F1MAA4	F1MAA4	F1MAA4_RAT	Atp13a2	ATPase cation transporting 13A2	1	ELAERPWPTLPVGSVR	ELAERPWPTLPVGSVR	3	ELAERPWPTLPVGSVR3	6253.28	11264.3	9453.51
B1WC43	B1WC43	B1WC43_RAT	Tmem41a	Transmembrane protein 41a	1	ELAEVLR	ELAEVLR	2	ELAEVLR2	20606.8	24204.4	31608.8
P0CC10	P0CC10	LRC4B_RAT	Lrrc4b	Leucine-rich repeat-containing protein 4B	1	ELAEVPASIPVNTR	ELAEVPASIPVNTR	2	ELAEVPASIPVNTR2	11303.2	17087	9783.64
O88637	O88637	PCY2_RAT	Pcyt2	Ethanolamine-phosphate cytidylyltransferase	1	ELAFLEALR	ELAFLEALR	2	ELAFLEALR2	4922.88	5777.52	4419.98
Q1HCL7	Q1HCL7	NAKD2_RAT	Nadk2	NAD kinase 2, mitochondrial	1	ELAGGGSPADGGFRPSR	ELAGGGSPADGGFRPSR	3	ELAGGGSPADGGFRPSR3	18076.8	11147.3	10451.3
P54311	A0A8I5ZM25;P54311	GBB1_RAT	Gnb1	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1	0	ELAGHTGYLSCCR	ELAGHTGYLSC(UniMod:4)C(UniMod:4)R	2	ELAGHTGYLSC(UniMod:4)C(UniMod:4)R2	19718	11190.7	17985.1
P54311	A0A8I5ZM25;P54311	GBB1_RAT	Gnb1	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1	0	ELAGHTGYLSCCR	ELAGHTGYLSC(UniMod:4)C(UniMod:4)R	3	ELAGHTGYLSC(UniMod:4)C(UniMod:4)R3	389787	419441	449444
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	ELAGLALQFTTNPK	ELAGLALQFTTNPK	2	ELAGLALQFTTNPK2	6336.92	6219.45	9894.42
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	ELAGQPVHLK	ELAGQPVHLK	2	ELAGQPVHLK2	31860.8	29786.5	28670.7
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	ELAHEATK	ELAHEATK	2	ELAHEATK2			7628.25
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	ELAHSLAQLQSCPQEEGPGGR	ELAHSLAQLQSC(UniMod:4)PQEEGPGGR	3	ELAHSLAQLQSC(UniMod:4)PQEEGPGGR3	51053.4	64187.2	63787.8
Q91XJ1	Q91XJ1	BECN1_RAT	Becn1	Beclin-1	1	ELALEEER	ELALEEER	2	ELALEEER2	30504	21375.9	18551
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	ELALNTALFAK	ELALNTALFAK	2	ELALNTALFAK2	102835	121141	117916
Q6AY86	Q6AY86	VP26A_RAT	Vps26a	Vacuolar protein sorting-associated protein 26A	1	ELALPGELTQSR	ELALPGELTQSR	2	ELALPGELTQSR2	99426.7	100580	87609.3
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	ELALQPK	ELALQPK	2	ELALQPK2	47272.7	42879.7	41964.7
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	ELAMPGEDLK	ELAMPGEDLK	2	ELAMPGEDLK2	197484	176939	200916
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	ELANDVK	ELANDVK	2	ELANDVK2	68786	77619.9	46824.6
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	ELANLGGVCAAALMK	ELANLGGVC(UniMod:4)AAALMK	2	ELANLGGVC(UniMod:4)AAALMK2	48025	49088.2	63923.3
P53812	P53812	PIPNB_RAT	Pitpnb	Phosphatidylinositol transfer protein beta isoform	1	ELANTPDCPK	ELANTPDC(UniMod:4)PK	2	ELANTPDC(UniMod:4)PK2	7858.68	4361.72	6056.89
Q4AEF8	Q4AEF8;D4ABY2	COPG1_RAT	Copg1	Coatomer subunit gamma-1	0	ELAPAVSVLQLFCSSPK	ELAPAVSVLQLFC(UniMod:4)SSPK	2	ELAPAVSVLQLFC(UniMod:4)SSPK2	38826.9	44523.4	42533.9
Q4AEF8	Q4AEF8;D4ABY2	COPG1_RAT	Copg1	Coatomer subunit gamma-1	0	ELAPAVSVLQLFCSSPK	ELAPAVSVLQLFC(UniMod:4)SSPK	3	ELAPAVSVLQLFC(UniMod:4)SSPK3	18611.3	21764.7	21500.9
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	ELAPAVSVLQLFCSSPKPALR	ELAPAVSVLQLFC(UniMod:4)SSPKPALR	3	ELAPAVSVLQLFC(UniMod:4)SSPKPALR3	32103.9	47098.8	32734
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	ELAPAVSVLQLFCSSPKPALR	ELAPAVSVLQLFC(UniMod:4)SSPKPALR	4	ELAPAVSVLQLFC(UniMod:4)SSPKPALR4		1454.45	7918.76
Q5U204	Q5U204	LTOR3_RAT	Lamtor3	Ragulator complex protein LAMTOR3	1	ELAPLFEELIK	ELAPLFEELIK	2	ELAPLFEELIK2	10577.7	12503.1	17212.2
Q3T1J9	Q3T1J9;A0A8I5ZK61	MOB1A_RAT	Mob1a	MOB kinase activator 1A	0	ELAPLQELIEK	ELAPLQELIEK	2	ELAPLQELIEK2	93934.5	79091.1	89557
P17074	F1M764;D3ZSH6;F1LYF3;A0A8I6AHY3;P17074	RS19_RAT	Rps19	Small ribosomal subunit protein eS19	0	ELAPYDENWFYTR	ELAPYDENWFYTR	2	ELAPYDENWFYTR2	14008.6	9619.1	
D3ZHK4	D3ZHK4	D3ZHK4_RAT	Rb1cc1	RB1-inducible coiled-coil 1	1	ELAQGFLANQMR	ELAQGFLANQMR	2	ELAQGFLANQMR2	5757.58	4486.02	
Q5M890	Q5M890	Q5M890_RAT	Apon	Apolipoprotein N	1	ELAQLLVEVAEK	ELAQLLVEVAEK	2	ELAQLLVEVAEK2	2.31896e+06	141447	120223
Q5M890	Q5M890	Q5M890_RAT	Apon	Apolipoprotein N	1	ELAQLLVEVAEK	ELAQLLVEVAEK	3	ELAQLLVEVAEK3	198859	177556	169949
Q5M890	Q5M890	Q5M890_RAT	Apon	Apolipoprotein N	1	ELAQLLVEVAEKLPSIDLVR	ELAQLLVEVAEKLPSIDLVR	4	ELAQLLVEVAEKLPSIDLVR4	9520.73		1684.26
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	ELAQNASSDTPMDPVTFIQTLPSDLR	ELAQNASSDTPMDPVTFIQTLPSDLR	3	ELAQNASSDTPMDPVTFIQTLPSDLR3	9552.28	8657.49	5584.55
Q5RKI1	Q5RKI1;Q6P3V8	IF4A2_RAT	Eif4a2	Eukaryotic initiation factor 4A-II	0	ELAQQIQK	ELAQQIQK	2	ELAQQIQK2	118836	71554.4	75534.3
D3ZT64	D3ZT64	D3ZT64_RAT	Atg2a	Autophagy related 2A	1	ELAQSSGGPLPQASPVSVYLFPGER	ELAQSSGGPLPQASPVSVYLFPGER	3	ELAQSSGGPLPQASPVSVYLFPGER3	7955.56	2704.3	9677.04
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	ELAQTLNVCFSTLPGYIR	ELAQTLNVC(UniMod:4)FSTLPGYIR	3	ELAQTLNVC(UniMod:4)FSTLPGYIR3	15441.9		5936.95
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	ELAQTTR	ELAQTTR	2	ELAQTTR2	217925	212059	265588
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	ELASELR	ELASELR	1	ELASELR1	47188.4	41859.2	32849.1
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	ELASELR	ELASELR	2	ELASELR2	2.27725e+07	2.18392e+07	2.35344e+07
A0A0G2K528	A0A0G2K528	A0A0G2K528_RAT	Stx16	Syntaxin 16	1	ELASLHDK	ELASLHDK	2	ELASLHDK2	12321.2	10483.9	7864.28
F1M8H2	F1M8H2	F1M8H2_RAT	Wars2	tryptophan--tRNA ligase	1	ELASPVFEEVKK	ELASPVFEEVKK	3	ELASPVFEEVKK3	14629.3	7440.99	6786.93
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	ELASPVSPELR	ELASPVSPELR	2	ELASPVSPELR2	62903	53475.9	58040.5
P48500	A0A0G2JWU1;P48500	TPIS_RAT	Tpi1	Triosephosphate isomerase	0	ELASQPDVDGFLVGGASLKPEFVDIINAK	ELASQPDVDGFLVGGASLKPEFVDIINAK	4	ELASQPDVDGFLVGGASLKPEFVDIINAK4	7906.01		7205.95
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	ELATEGMHR	ELATEGMHR	2	ELATEGMHR2	1000.95	879.125	1985.05
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	ELATVLSDQPGLLGPK	ELATVLSDQPGLLGPK	2	ELATVLSDQPGLLGPK2	67851.5	56923.1	60643.6
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	ELATVLSDQPGLLGPK	ELATVLSDQPGLLGPK	3	ELATVLSDQPGLLGPK3	15978.8	16605.2	15212.3
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	ELAVETK	ELAVETK	2	ELAVETK2	90533.6	64417.3	79415.7
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	ELAVQIYEEAR	ELAVQIYEEAR	2	ELAVQIYEEAR2	22052	16326.2	20971.3
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	ELAVQIYEEARK	ELAVQIYEEARK	3	ELAVQIYEEARK3	8916.87	14048.5	9309.36
P33436	P33436	MMP2_RAT	Mmp2	72 kDa type IV collagenase	1	ELAVQYLNTFYGCPK	ELAVQYLNTFYGC(UniMod:4)PK	2	ELAVQYLNTFYGC(UniMod:4)PK2	5469.98	2804.37	
A0A8I6B124	A0A8I6B124	A0A8I6B124_RAT	Zswim8	Zinc finger, SWIM-type containing 8	1	ELCAQLR	ELC(UniMod:4)AQLR	2	ELC(UniMod:4)AQLR2	7430.48	4948.04	9700.28
Q4QQT4	Q4QQT4	2AAB_RAT	Ppp2r1b	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	1	ELCENLPTEGR	ELC(UniMod:4)ENLPTEGR	2	ELC(UniMod:4)ENLPTEGR2	17045.2	13139.5	9044.9
A0A8I6A896	A0A8I6A896	A0A8I6A896_RAT	Ap4b1	AP complex subunit beta	1	ELCFAALCHVR	ELC(UniMod:4)FAALC(UniMod:4)HVR	3	ELC(UniMod:4)FAALC(UniMod:4)HVR3	2134.13	3437.21	
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	ELCFDDELVLQQLR	ELC(UniMod:4)FDDELVLQQLR	2	ELC(UniMod:4)FDDELVLQQLR2	2335.36	2007.44	6104.38
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	ELCFDDELVLQQLR	ELC(UniMod:4)FDDELVLQQLR	3	ELC(UniMod:4)FDDELVLQQLR3	2310.66		
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	ELCGNEVPVVPEQGK	ELC(UniMod:4)GNEVPVVPEQGK	2	ELC(UniMod:4)GNEVPVVPEQGK2	19430.7	14418.4	10519.1
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	ELCGSSAALR	ELC(UniMod:4)GSSAALR	2	ELC(UniMod:4)GSSAALR2	51942.6	47646.8	46344.5
P31325	P31325	PHKG2_RAT	Phkg2	Phosphorylase b kinase gamma catalytic chain, liver/testis isoform	1	ELCGTPGYLAPEILK	ELC(UniMod:4)GTPGYLAPEILK	2	ELC(UniMod:4)GTPGYLAPEILK2	5831.79	12622	10288.5
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	ELCHVCCMK	ELC(UniMod:4)HVC(UniMod:4)C(UniMod:4)MK	3	ELC(UniMod:4)HVC(UniMod:4)C(UniMod:4)MK3	17351.9	19530.8	24154.3
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	ELCLPLQDTFEALPR	ELC(UniMod:4)LPLQDTFEALPR	2	ELC(UniMod:4)LPLQDTFEALPR2	194779	207825	215505
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	ELCLPLQDTFEALPR	ELC(UniMod:4)LPLQDTFEALPR	3	ELC(UniMod:4)LPLQDTFEALPR3	35494.7	29006.2	35373.9
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	ELCSLASDLSQPDLVYK	ELC(UniMod:4)SLASDLSQPDLVYK	2	ELC(UniMod:4)SLASDLSQPDLVYK2	5173.94	4266.04	1204.68
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	ELCSPLQTR	ELC(UniMod:4)SPLQTR	2	ELC(UniMod:4)SPLQTR2		8853.89	
A0A0G2KAF4	A0A0G2KAF4	A0A0G2KAF4_RAT	Nfxl1	Nuclear transcription factor, X-box binding-like 1	1	ELCSRPPTCHHSSQEK	ELC(UniMod:4)SRPPTC(UniMod:4)HHSSQEK	4	ELC(UniMod:4)SRPPTC(UniMod:4)HHSSQEK4			1971.47
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	ELDALLEQQNTIESK	ELDALLEQQNTIESK	2	ELDALLEQQNTIESK2	5138.75	1553.39	
P53565	P53565;A0A8I5ZR58	CUX1_RAT	Cux1	Homeobox protein cut-like 1	0	ELDATATVLANR	ELDATATVLANR	2	ELDATATVLANR2	10619.7	3964.05	8844.22
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	ELDDAFR	ELDDAFR	2	ELDDAFR2	40531.8	41172.6	33716.8
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	ELDDISQEIAQLQR	ELDDISQEIAQLQR	2	ELDDISQEIAQLQR2	2514.4	10771.6	8691.71
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	ELDDLIESWEK	ELDDLIESWEK	2	ELDDLIESWEK2	9862.5	7334.89	5850.33
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	ELDDVNSSVK	ELDDVNSSVK	2	ELDDVNSSVK2	12313.4	8248.15	3774.17
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	ELDEEGNQR	ELDEEGNQR	2	ELDEEGNQR2	9629.27		8559.19
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	ELDEEHSQELK	ELDEEHSQELK	2	ELDEEHSQELK2	1967.26	4420.18	
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	ELDEEHSQELK	ELDEEHSQELK	3	ELDEEHSQELK3	41041.2	36630.6	26800.4
D3ZZL9	D3ZZL9	GCC2_RAT	Gcc2	GRIP and coiled-coil domain-containing protein 2	1	ELDEVTSTK	ELDEVTSTK	2	ELDEVTSTK2	5115.62	7215.16	7732.84
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	ELDGERER	ELDGERER	2	ELDGERER2			53453.6
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	ELDGQEAR	ELDGQEAR	2	ELDGQEAR2	31211.2	17749.4	23812.5
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	ELDGVQLQFSEQGTQIR	ELDGVQLQFSEQGTQIR	2	ELDGVQLQFSEQGTQIR2	1966.82	3590.91	
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	ELDGVQLQFSEQGTQIR	ELDGVQLQFSEQGTQIR	3	ELDGVQLQFSEQGTQIR3	4326.75		2170.61
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	ELDIMEPK	ELDIMEPK	2	ELDIMEPK2	216520	237776	244358
D3ZUY0	D3ZUY0	D3ZUY0_RAT	Rdh14	Retinol dehydrogenase 14	1	ELDLASLR	ELDLASLR	2	ELDLASLR2	29915	40109.8	35909.9
Q6AYI5	Q6AYI5	SHOC2_RAT	Shoc2	Leucine-rich repeat protein SHOC-2	1	ELDLEENK	ELDLEENK	2	ELDLEENK2	6330.73	3269.02	6242.25
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	ELDLPTGPR	ELDLPTGPR	2	ELDLPTGPR2	13438	9659.04	
Q5HZV9	Q5HZV9	PP1R7_RAT	Ppp1r7	Protein phosphatase 1 regulatory subunit 7	1	ELDLYDNQIK	ELDLYDNQIK	2	ELDLYDNQIK2	67974.4	71139.1	50058.7
Q5HZV9	Q5HZV9	PP1R7_RAT	Ppp1r7	Protein phosphatase 1 regulatory subunit 7	1	ELDLYDNQIKK	ELDLYDNQIKK	2	ELDLYDNQIKK2	6790.08	4291.59	3384.79
Q5HZV9	Q5HZV9	PP1R7_RAT	Ppp1r7	Protein phosphatase 1 regulatory subunit 7	1	ELDLYDNQIKK	ELDLYDNQIKK	3	ELDLYDNQIKK3	53068.7	64198.2	58929.4
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	ELDMEPYTVAGVAK	ELDMEPYTVAGVAK	2	ELDMEPYTVAGVAK2	152660	173906	179956
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	ELDMEPYTVAGVAK	ELDMEPYTVAGVAK	3	ELDMEPYTVAGVAK3			2946.44
Q53UA7	O88664;Q9JLS3;Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	0	ELDNLQYR	ELDNLQYR	2	ELDNLQYR2	167508	210117	184381
Q9EPH1	Q9EPH1	A1BG_RAT	A1bg	Alpha-1B-glycoprotein	1	ELDNQSPFTCR	ELDNQSPFTC(UniMod:4)R	2	ELDNQSPFTC(UniMod:4)R2	11933.5	13308.7	10185.5
D3ZFJ3	D3ZFJ3	3BP1_RAT	Sh3bp1	SH3 domain-binding protein 1	1	ELDPDSSMGK	ELDPDSSMGK	2	ELDPDSSMGK2	20840.8	21572.6	19232.3
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	ELDPTNMTYITNQAAVHFEK	ELDPTNMTYITNQAAVHFEK	3	ELDPTNMTYITNQAAVHFEK3	4656.42	11655.3	8948.08
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	ELDPVLTEVTLMNAR	ELDPVLTEVTLMNAR	2	ELDPVLTEVTLMNAR2	2663.96	3499.82	6929.34
P21571	P21571	ATP5J_RAT	Atp5pf	ATP synthase-coupling factor 6, mitochondrial	1	ELDPVQK	ELDPVQK	2	ELDPVQK2	311554	273729	268725
A0A0G2JVT8	A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	1	ELDQDSSLIEK	ELDQDSSLIEK	2	ELDQDSSLIEK2	5037.16		5181.06
P63331	A0A0G2JYA4;P63331	PP2AA_RAT	Ppp2ca	Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform	0	ELDQWIEQLNECK	ELDQWIEQLNEC(UniMod:4)K	2	ELDQWIEQLNEC(UniMod:4)K2	109779	108262	97290.6
P63331	A0A0G2JYA4;P63331	PP2AA_RAT	Ppp2ca	Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform	0	ELDQWIEQLNECK	ELDQWIEQLNEC(UniMod:4)K	3	ELDQWIEQLNEC(UniMod:4)K3	25279.1	20206.7	29317.9
P62716	P62716	PP2AB_RAT	Ppp2cb	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	1	ELDQWVEQLNECK	ELDQWVEQLNEC(UniMod:4)K	2	ELDQWVEQLNEC(UniMod:4)K2	22610.5	16753.7	23300.2
F1MA46	F1MA46	F1MA46_RAT	Pcdh12	Protocadherin 12	1	ELDREVHSYFDLVLTAYDNGNPPK	ELDREVHSYFDLVLTAYDNGNPPK	3	ELDREVHSYFDLVLTAYDNGNPPK3	10658.1	13574.1	18288.7
F1MA46	F1MA46	F1MA46_RAT	Pcdh12	Protocadherin 12	1	ELDREVHSYFDLVLTAYDNGNPPK	ELDREVHSYFDLVLTAYDNGNPPK	4	ELDREVHSYFDLVLTAYDNGNPPK4	27640.9	28310.6	16926.7
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	ELDRNELFEK	ELDRNELFEK	2	ELDRNELFEK2	9289.32	7052.79	4520.14
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	ELDRNELFEK	ELDRNELFEK	3	ELDRNELFEK3	121723	69809	74692.2
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	ELDSITPDITPGWK	ELDSITPDITPGWK	2	ELDSITPDITPGWK2	110608	131420	150414
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	ELDSITPDITPGWK	ELDSITPDITPGWK	3	ELDSITPDITPGWK3		2429.7	2948.64
Q5XIJ5	Q5XIJ5	AB17A_RAT	Abhd17a	Alpha/beta hydrolase domain-containing protein 17A	1	ELDTIEVFVTK	ELDTIEVFVTK	2	ELDTIEVFVTK2	14603.7	12996.7	12196.1
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	ELDTIQECIK	ELDTIQEC(UniMod:4)IK	2	ELDTIQEC(UniMod:4)IK2	8656.3		9787.37
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	ELDTLNNEIIDLQR	ELDTLNNEIIDLQR	2	ELDTLNNEIIDLQR2	68580.4	77973.5	67448.3
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	ELDTLNNEIIDLQR	ELDTLNNEIIDLQR	3	ELDTLNNEIIDLQR3	22372.7	21696.8	26405.9
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	ELDTVTLEDIK	ELDTVTLEDIK	2	ELDTVTLEDIK2	77868.2	70097.1	69318.7
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	ELDTVTLEDIKEHVR	ELDTVTLEDIKEHVR	3	ELDTVTLEDIKEHVR3	79341.5	84418.3	66124.3
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	ELDTVTLEDIKEHVR	ELDTVTLEDIKEHVR	4	ELDTVTLEDIKEHVR4	162278	202470	186333
A0A8I6AAF1	A0A8I6AAF1	A0A8I6AAF1_RAT	Card19	Caspase recruitment domain family, member 19	1	ELDWGIER	ELDWGIER	2	ELDWGIER2	45415.9	51180	43469.9
F1LYX9	F1LYX9	F1LYX9_RAT	Dsg2	Desmoglein 2	1	ELDYEEMK	ELDYEEMK	2	ELDYEEMK2	23158	11190.5	11304.3
F1LYX9	F1LYX9	F1LYX9_RAT	Dsg2	Desmoglein 2	1	ELDYEEMKK	ELDYEEMKK	2	ELDYEEMKK2	10093.3		7164.78
F1LYX9	F1LYX9	F1LYX9_RAT	Dsg2	Desmoglein 2	1	ELDYEEMKK	ELDYEEMKK	3	ELDYEEMKK3	70131.5	59102.6	54519.9
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	ELEAASAPEER	ELEAASAPEER	2	ELEAASAPEER2	17600.7	21923.8	15911.8
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	ELEADFRDVLCNK	ELEADFRDVLC(UniMod:4)NK	3	ELEADFRDVLC(UniMod:4)NK3	10100.5	5226.68	6271.2
Q4V7D3	Q4V7D3	MACOI_RAT	Maco1	Macoilin	1	ELEAEGK	ELEAEGK	1	ELEAEGK1			77371.6
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	ELEAESYHDIK	ELEAESYHDIK	2	ELEAESYHDIK2	59423.3	45709.6	38975
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	ELEAESYHDIK	ELEAESYHDIK	3	ELEAESYHDIK3	204000	222811	216042
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	ELEAESYHDIKR	ELEAESYHDIKR	2	ELEAESYHDIKR2	4464	2872.53	1925.35
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	ELEAESYHDIKR	ELEAESYHDIKR	3	ELEAESYHDIKR3	215270	225939	218863
A0A8I6GK63	A0A8I6GK63	A0A8I6GK63_RAT	Smc4	Structural maintenance of chromosomes protein	1	ELEANVLTTAPDK	ELEANVLTTAPDK	2	ELEANVLTTAPDK2	1330.17		3944.28
Q9JLZ1	Q9JLZ1	GLRX3_RAT	Glrx3	Glutaredoxin-3	1	ELEASEELDTICPK	ELEASEELDTIC(UniMod:4)PK	2	ELEASEELDTIC(UniMod:4)PK2	41453.9	28965.2	23116.3
P36506	P36506	MP2K2_RAT	Map2k2	Dual specificity mitogen-activated protein kinase kinase 2	1	ELEASFGRPVVDGADGEPHSVSPR	ELEASFGRPVVDGADGEPHSVSPR	4	ELEASFGRPVVDGADGEPHSVSPR4	10230.2	4251.55	7035.99
Q6J1Y9	Q6J1Y9	UBP19_RAT	Usp19	Ubiquitin carboxyl-terminal hydrolase 19	1	ELECAEDPGSAGEAAR	ELEC(UniMod:4)AEDPGSAGEAAR	2	ELEC(UniMod:4)AEDPGSAGEAAR2	6006.29	6122.1	2719.1
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	ELEDATETADAMNR	ELEDATETADAMNR	2	ELEDATETADAMNR2	84462.5	99017	1.06859e+07
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	ELEDATETADAMNR	ELEDATETADAMNR	3	ELEDATETADAMNR3	997599	1.3106e+06	1.16846e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	ELEDATETADAMNREVSSLK	ELEDATETADAMNREVSSLK	3	ELEDATETADAMNREVSSLK3	7413.89	10922.9	11859.7
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	ELEDATETADAMNREVSSLKNK	ELEDATETADAMNREVSSLKNK	4	ELEDATETADAMNREVSSLKNK4		4535.62	4289.55
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	ELEDGGLER	ELEDGGLER	2	ELEDGGLER2	39959.7	29088.8	34300.2
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	ELEDLRANMMPHANK	ELEDLRANMMPHANK	4	ELEDLRANMMPHANK4	10119.1	12768.9	15705.2
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	ELEDPEFATADALDR	ELEDPEFATADALDR	2	ELEDPEFATADALDR2	31163.9	21195.7	20826
Q5XI64	Q5XI64	ABHD6_RAT	Abhd6	Monoacylglycerol lipase ABHD6	1	ELEDSAATQK	ELEDSAATQK	2	ELEDSAATQK2		6567.57	
P14270	P14270	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	1	ELEDVNK	ELEDVNK	2	ELEDVNK2	43452.1	56502.1	52144
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	ELEDWDTQLAQR	ELEDWDTQLAQR	2	ELEDWDTQLAQR2	3065.24	5826.02	4530.94
Q3B7T9	Q3B7T9;A0A8I6AF99	RFIP1_RAT	Rab11fip1	Rab11 family-interacting protein 1	0	ELEDYIDNLLVR	ELEDYIDNLLVR	2	ELEDYIDNLLVR2		6673.77	5908.74
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	ELEEARK	ELEEARK	2	ELEEARK2			3994.8
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ELEEAVTSALQQETEK	ELEEAVTSALQQETEK	2	ELEEAVTSALQQETEK2	37123.3	34642	32593.7
B0BNA5	B0BNA5	COTL1_RAT	Cotl1	Coactosin-like protein	1	ELEEDFIR	ELEEDFIR	2	ELEEDFIR2	673634	598747	685252
Q4KLJ8	Q4KLJ8	PDCL3_RAT	Pdcl3	Phosducin-like protein 3	1	ELEEEEEGK	ELEEEEEGK	2	ELEEEEEGK2		4856.62	
Q4KLJ8	Q4KLJ8	PDCL3_RAT	Pdcl3	Phosducin-like protein 3	1	ELEEEEEGKEEQR	ELEEEEEGKEEQR	3	ELEEEEEGKEEQR3	41978.1	66729.2	40088.3
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	ELEEEITFR	ELEEEITFR	2	ELEEEITFR2	45238.9	49110.3	23892.2
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	ELEEEITFRK	ELEEEITFRK	2	ELEEEITFRK2		2442.92	6287.86
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	ELEEEITFRK	ELEEEITFRK	3	ELEEEITFRK3	9459.9	15269.3	18418.6
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	ELEEELQHLR	ELEEELQHLR	3	ELEEELQHLR3	4098.75	7698.99	5377.36
Q6AY63	Q6AY63	NUDT5_RAT	Nudt5	ADP-sugar pyrophosphatase	1	ELEEETGYK	ELEEETGYK	2	ELEEETGYK2	9159.6	5037.44	10265.4
B3GNI6	B3GNI6	SEP11_RAT	Septin11	Septin-11	1	ELEEEVSNFQK	ELEEEVSNFQK	2	ELEEEVSNFQK2	17615.6	11075.2	16338.6
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	ELEEEWVK	ELEEEWVK	2	ELEEEWVK2	82694.9	92255.1	86939
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	ELEEEWVKLPTGAPKPSR	ELEEEWVKLPTGAPKPSR	4	ELEEEWVKLPTGAPKPSR4	7339.21	10142.4	4998.98
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	ELEEHVVAVANK	ELEEHVVAVANK	2	ELEEHVVAVANK2	1146.23	2282.03	2054.59
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	ELEEHVVAVANK	ELEEHVVAVANK	3	ELEEHVVAVANK3	29682.9	25483.2	25805.2
D3Z8W5	D3Z8W5	D3Z8W5_RAT	Ube2l3	Ube2l3 protein	1	ELEEIRK	ELEEIRK	2	ELEEIRK2	15086.8	13498.4	13804.2
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	ELEEIVQPIISK	ELEEIVQPIISK	2	ELEEIVQPIISK2	601901	506534	614893
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	ELEEIVQPIISK	ELEEIVQPIISK	3	ELEEIVQPIISK3	21306.9	16661.5	18035.2
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	ELEEMIENLEPHMDDPDVK	ELEEMIENLEPHMDDPDVK	3	ELEEMIENLEPHMDDPDVK3	17829.2	29613.7	24766.2
P34901	P34901	SDC4_RAT	Sdc4	Syndecan-4	1	ELEENEVIPK	ELEENEVIPK	2	ELEENEVIPK2	4064.8	7142.82	4349.43
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	ELEEQLGPVAEETR	ELEEQLGPVAEETR	2	ELEEQLGPVAEETR2	1.71385e+07	1.85974e+07	1.93959e+07
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	ELEEQLGPVAEETR	ELEEQLGPVAEETR	3	ELEEQLGPVAEETR3	6.30414e+06	6.77829e+06	7.7156e+06
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	ELEEQLGPVAEETRAR	ELEEQLGPVAEETRAR	3	ELEEQLGPVAEETRAR3	72669.7	88833.6	124349
Q5PQK5	Q5PQK5	Q5PQK5_RAT	Rdx	Radixin	1	ELEEQTRK	ELEEQTRK	2	ELEEQTRK2			4828.26
P15127	P15127	INSR_RAT	Insr	Insulin receptor	1	ELEESSFR	ELEESSFR	2	ELEESSFR2	7513.93	5643.51	9401.69
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	ELEETLNK	ELEETLNK	2	ELEETLNK2	22970.2	23939.3	7404.49
Q9JMK8	Q9JMK8	VPS54_RAT	Vps54	Vacuolar protein sorting-associated protein 54	1	ELEEVSQQR	ELEEVSQQR	2	ELEEVSQQR2	6938.69		
P08081	P08081	CLCA_RAT	Clta	Clathrin light chain A	1	ELEEWYAR	ELEEWYAR	2	ELEEWYAR2	332895	392342	454924
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	ELEEYRR	ELEEYRR	2	ELEEYRR2	2003.68		
A0A8I5YBR2	A0A8I5YBR2	A0A8I5YBR2_RAT	Cops6	COP9 signalosome complex subunit 6	1	ELEFLGWYTTGGPPDPSDIHVHK	ELEFLGWYTTGGPPDPSDIHVHK	3	ELEFLGWYTTGGPPDPSDIHVHK3	14461.3	11651.7	6639.93
A0A8I5YBR2	A0A8I5YBR2	A0A8I5YBR2_RAT	Cops6	COP9 signalosome complex subunit 6	1	ELEFLGWYTTGGPPDPSDIHVHK	ELEFLGWYTTGGPPDPSDIHVHK	4	ELEFLGWYTTGGPPDPSDIHVHK4	51216.5	53642.1	59033.2
P62243	D3ZIE1;P62243;M0R7Q5	RS8_RAT	Rps8	Small ribosomal subunit protein eS8	0	ELEFYLR	ELEFYLR	2	ELEFYLR2	51559.4	60299	26992.7
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	ELEGLLQDMSIK	ELEGLLQDMSIK	2	ELEGLLQDMSIK2	36422.7	18492.6	39189.9
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	ELEGLTGQLR	ELEGLTGQLR	2	ELEGLTGQLR2	66047.1	78811.6	72956.7
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	ELEGPIYSR	ELEGPIYSR	2	ELEGPIYSR2	28342.7	24255.4	28884.5
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	ELEGPVYEK	ELEGPVYEK	2	ELEGPVYEK2	56586	74420.5	53587.7
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	ELEGTQQTLQTIK	ELEGTQQTLQTIK	2	ELEGTQQTLQTIK2	2022.74		
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	ELEGVITK	ELEGVITK	1	ELEGVITK1	2877.48	2066.72	1954.46
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	ELEGVITK	ELEGVITK	2	ELEGVITK2	373879	409129	372140
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	ELEIAQMDQLLLEK	ELEIAQMDQLLLEK	2	ELEIAQMDQLLLEK2	27826	12126.7	17317.2
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	ELEIEER	ELEIEER	2	ELEIEER2	196722	182892	177202
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	ELEIEERER	ELEIEERER	3	ELEIEERER3	12948.9	6279.35	11920
P97697	P97697	IMPA1_RAT	Impa1	Inositol monophosphatase 1	1	ELEIIPLQR	ELEIIPLQR	2	ELEIIPLQR2	37849.3	33258.7	39362.2
P97697	P97697	IMPA1_RAT	Impa1	Inositol monophosphatase 1	1	ELEIIPLQRDDES	ELEIIPLQRDDES	2	ELEIIPLQRDDES2	23671.6	15436.2	12162.5
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	ELEKPIFCLK	ELEKPIFC(UniMod:4)LK	2	ELEKPIFC(UniMod:4)LK2	27659	26118.1	18791.7
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	ELEKPIFCLK	ELEKPIFC(UniMod:4)LK	3	ELEKPIFC(UniMod:4)LK3	117557	128157	100121
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	ELELCAR	ELELC(UniMod:4)AR	2	ELELC(UniMod:4)AR2	16607.6	15827	
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	ELELELAQTK	ELELELAQTK	2	ELELELAQTK2	66360.2	79896.2	63005
Q01986	Q01986	MP2K1_RAT	Map2k1	Dual specificity mitogen-activated protein kinase kinase 1	1	ELELLFGCQVEGDAAETPPRPR	ELELLFGC(UniMod:4)QVEGDAAETPPRPR	3	ELELLFGC(UniMod:4)QVEGDAAETPPRPR3	42531.8	50121.2	43529.8
M0RCN2	M0RCN2	M0RCN2_RAT	Tnfsf14	TNF superfamily member 14	1	ELELLVSR	ELELLVSR	2	ELELLVSR2	21825	8622.11	17755.1
F1LWZ3	F1LWZ3	F1LWZ3_RAT	Rhbdf2	Inactive rhomboid protein	1	ELELPSQEVPSFQGTESPKPCK	ELELPSQEVPSFQGTESPKPC(UniMod:4)K	3	ELELPSQEVPSFQGTESPKPC(UniMod:4)K3	46328.5	64301.8	43962.6
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	ELELQCLDGDDAK	ELELQC(UniMod:4)LDGDDAK	2	ELELQC(UniMod:4)LDGDDAK2	18102.2	18208.1	15960.4
O55043	O55043	ARHG7_RAT	Arhgef7	Rho guanine nucleotide exchange factor 7	1	ELELQILTEPIR	ELELQILTEPIR	2	ELELQILTEPIR2	4328.47	6884.4	8810.04
Q5XHZ9	Q5XHZ9	PCH2_RAT	Trip13	Pachytene checkpoint protein 2 homolog	1	ELEMIGFIENNVSK	ELEMIGFIENNVSK	2	ELEMIGFIENNVSK2	13128.1	15965.9	
A0A0G2JVT8	A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	1	ELEMSHGMDK	ELEMSHGMDK	3	ELEMSHGMDK3	2730.37	7147.62	4039.5
Q5XIA1	Q5XIA1	NCLN_RAT	Ncln	BOS complex subunit NCLN	1	ELEMVAAHQFPDVSFSMVHK	ELEMVAAHQFPDVSFSMVHK	3	ELEMVAAHQFPDVSFSMVHK3	4285.73	5999.7	
Q5XIA1	Q5XIA1	NCLN_RAT	Ncln	BOS complex subunit NCLN	1	ELEMVAAHQFPDVSFSMVHK	ELEMVAAHQFPDVSFSMVHK	4	ELEMVAAHQFPDVSFSMVHK4	15232.1	15293	7487.92
Q5RKH6	Q5RKH6	OS9_RAT	Os9	Protein OS-9	1	ELENIIQETEK	ELENIIQETEK	2	ELENIIQETEK2	4686.01	5328.49	3416.37
Q5RKH6	Q5RKH6	OS9_RAT	Os9	Protein OS-9	1	ELENIIQETEKELDPEGLRK	ELENIIQETEKELDPEGLRK	4	ELENIIQETEKELDPEGLRK4	6968.66	11763.5	14457.5
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	ELENQMGSLK	ELENQMGSLK	2	ELENQMGSLK2	115879	77852.4	96569.4
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	ELENTVLELSQK	ELENTVLELSQK	2	ELENTVLELSQK2		1275.21	
D3ZTC4	D3ZTC4	D3ZTC4_RAT	Ccdc88b	Coiled-coil domain containing 88B	1	ELEQAALER	ELEQAALER	2	ELEQAALER2	12547.5	6992.97	12870.8
D4A0T0	D4A0T0	D4A0T0_RAT	Ndufb10	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10	1	ELEQFTQVSK	ELEQFTQVSK	2	ELEQFTQVSK2	61273.5	62192.1	73196.4
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	ELEQHIQTSDPENFQSEER	ELEQHIQTSDPENFQSEER	3	ELEQHIQTSDPENFQSEER3	18994.7	29971.9	16698.8
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	ELEQIFCQFDSK	ELEQIFC(UniMod:4)QFDSK	2	ELEQIFC(UniMod:4)QFDSK2	39407.6	35430.7	37248.3
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	ELEQLSK	ELEQLSK	2	ELEQLSK2	19506.8	34790.3	27125.1
P32198	P32198	CPT1A_RAT	Cpt1a	Carnitine O-palmitoyltransferase 1, liver isoform	1	ELEQQMQQILDDPSEPQPGEAK	ELEQQMQQILDDPSEPQPGEAK	3	ELEQQMQQILDDPSEPQPGEAK3	19793.7	24424.7	25076.3
Q9QY17	Q9QY17	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	1	ELEQSIK	ELEQSIK	2	ELEQSIK2	193733	209980	221884
Q6AYE5	Q6AYE5	OAF_RAT	Oaf	Out at first protein homolog	1	ELEQVELPR	ELEQVELPR	2	ELEQVELPR2	30393.7	23736.5	25392.4
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	ELERPLVAATNNFQK	ELERPLVAATNNFQK	2	ELERPLVAATNNFQK2	1667.08	2828.65	
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	ELERPLVAATNNFQK	ELERPLVAATNNFQK	3	ELERPLVAATNNFQK3	79750.9	60823.5	81704.5
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	ELESCIDCPELVGR	ELESC(UniMod:4)IDC(UniMod:4)PELVGR	2	ELESC(UniMod:4)IDC(UniMod:4)PELVGR2	16197.9	12853.7	14030.9
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	ELESETGLSPEPK	ELESETGLSPEPK	2	ELESETGLSPEPK2	6144.65	5310.05	4159.17
F7F5Q9	F7F5Q9	F7F5Q9_RAT	Hcls1	Hematopoietic cell specific Lyn substrate 1	1	ELESGPK	ELESGPK	1	ELESGPK1	1147.26	6112.71	
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	ELESHSSWYAPEALQK	ELESHSSWYAPEALQK	2	ELESHSSWYAPEALQK2	27307.6	23545.4	19252.2
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	ELESHSSWYAPEALQK	ELESHSSWYAPEALQK	3	ELESHSSWYAPEALQK3	604074	563668	599523
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	ELESLFPR	ELESLFPR	2	ELESLFPR2	91181.6	105838	87501.5
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	ELESQVSCLEK	ELESQVSC(UniMod:4)LEK	2	ELESQVSC(UniMod:4)LEK2	27526.5	25177.1	31579.6
D3ZEJ9	D3ZEJ9	D3ZEJ9_RAT	RGD1310429	Similar to Protein Njmu-R1	1	ELESSEEGGSAEER	ELESSEEGGSAEER	2	ELESSEEGGSAEER2	5178.88	2433.73	
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	ELESVGIR	ELESVGIR	2	ELESVGIR2	113459	254902	73597.6
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	ELESVRR	ELESVRR	2	ELESVRR2			3654.55
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	ELETEGMK	ELETEGMK	2	ELETEGMK2	21124.7	22030.7	22669.4
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	ELETGPK	ELETGPK	1	ELETGPK1	3958.43	3311.23	
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	ELETQISELQEDLESER	ELETQISELQEDLESER	3	ELETQISELQEDLESER3	195738	196150	283969
A0A8I6GBD2	A0A8I6GBD2	A0A8I6GBD2_RAT	Actr10	Actin related protein 10	1	ELETQLLEQCTVDTGAAK	ELETQLLEQC(UniMod:4)TVDTGAAK	3	ELETQLLEQC(UniMod:4)TVDTGAAK3	16870.3	10409.1	13615.9
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	ELETSLAEAEK	ELETSLAEAEK	2	ELETSLAEAEK2	13587.6	31204.8	20714.4
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	ELETVCNDVLALLDK	ELETVC(UniMod:4)NDVLALLDK	2	ELETVC(UniMod:4)NDVLALLDK2	1.14276e+06	1.60095e+06	1.0931e+06
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	ELETVCNDVLALLDK	ELETVC(UniMod:4)NDVLALLDK	3	ELETVC(UniMod:4)NDVLALLDK3	177657	191362	115816
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	ELETVLNDEPGLLGPK	ELETVLNDEPGLLGPK	2	ELETVLNDEPGLLGPK2	10749	15356.4	11138.9
Q63692	Q63692	CDC37_RAT	Cdc37	Hsp90 co-chaperone Cdc37	1	ELEVAEGGGQVELER	ELEVAEGGGQVELER	2	ELEVAEGGGQVELER2	80241.3	76770.8	66548
Q63692	Q63692	CDC37_RAT	Cdc37	Hsp90 co-chaperone Cdc37	1	ELEVAEGGGQVELER	ELEVAEGGGQVELER	3	ELEVAEGGGQVELER3		6133.84	8573.45
Q9ERE6	Q9ERE6	MPRIP_RAT	Mprip	Myosin phosphatase Rho-interacting protein	1	ELEVLSEQYSQK	ELEVLSEQYSQK	2	ELEVLSEQYSQK2	6900.19	2602.11	5516.44
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	ELEVQHPAAK	ELEVQHPAAK	2	ELEVQHPAAK2	49658.4	38356.6	37294.3
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	ELEVSLR	ELEVSLR	2	ELEVSLR2	52358	31132.4	36374.3
Q5M9G8	Q5M9G8	DCA11_RAT	Dcaf11	DDB1- and CUL4-associated factor 11	1	ELEYNEIK	ELEYNEIK	2	ELEYNEIK2	15123.6	12458.3	20945.2
Q5PQX0	Q5PQX0	UXS1_RAT	Uxs1	UDP-glucuronic acid decarboxylase 1	1	ELEYQANNQYIPK	ELEYQANNQYIPK	2	ELEYQANNQYIPK2	5996.63	5973.95	3735.21
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	ELEYQVLGLR	ELEYQVLGLR	2	ELEYQVLGLR2	87692.9	88228.9	92079.1
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	ELFALHPSPDEEEPIER	ELFALHPSPDEEEPIER	3	ELFALHPSPDEEEPIER3	26200.3	40409.3	43184.6
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	ELFASLTPWACGSHTPVLAGR	ELFASLTPWAC(UniMod:4)GSHTPVLAGR	3	ELFASLTPWAC(UniMod:4)GSHTPVLAGR3	29414.5	40378.6	39136.5
Q64640	Q64640	ADK_RAT	Adk	Adenosine kinase	1	ELFDELVK	ELFDELVK	2	ELFDELVK2	7752.28	6090.27	5644.58
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	ELFDGLK	ELFDGLK	2	ELFDGLK2	14321.9	17988.8	13499.9
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	ELFDYNLR	ELFDYNLR	2	ELFDYNLR2	64423.6	65683.7	59751.8
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	ELFEADPER	ELFEADPER	2	ELFEADPER2	55803.7	39390.4	34928.3
F1M8V2	F1M8V2	F1M8V2_RAT	Ube4b	Ubiquitin conjugation factor E4	1	ELFEEVISK	ELFEEVISK	2	ELFEEVISK2	16326	21947.5	18856.8
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	ELFEMAR	ELFEMAR	2	ELFEMAR2	158328	129133	155677
Q792H5	Q792H5	CELF2_RAT	Celf2	CUGBP Elav-like family member 2	1	ELFEPYGAVYQINVLR	ELFEPYGAVYQINVLR	2	ELFEPYGAVYQINVLR2	10307.6	4710.81	9216.23
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	ELFHPYAER	ELFHPYAER	2	ELFHPYAER2	51393.6	57305.8	56131.2
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	ELFHPYAER	ELFHPYAER	3	ELFHPYAER3	538141	556685	657457
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	ELFIHCLPGTR	ELFIHC(UniMod:4)LPGTR	2	ELFIHC(UniMod:4)LPGTR2	12218.8	4135.58	9577.43
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	ELFIHCLPGTR	ELFIHC(UniMod:4)LPGTR	3	ELFIHC(UniMod:4)LPGTR3	94786.9	100524	108569
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	ELFLAMLMTACDLSAITKPWPIQQR	ELFLAMLMTAC(UniMod:4)DLSAITKPWPIQQR	3	ELFLAMLMTAC(UniMod:4)DLSAITKPWPIQQR3		9113.01	4757.37
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	ELFLGHIQQK	ELFLGHIQQK	2	ELFLGHIQQK2	5102.44	5418.35	1993.08
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	ELFLGHIQQK	ELFLGHIQQK	3	ELFLGHIQQK3	66287.1	45418.9	66140.2
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	ELFPDWK	ELFPDWK	2	ELFPDWK2	49328.5	43860.8	58044.5
Q6P6G2	Q6P6G2	CF089_RAT		Bombesin receptor-activated protein C6orf89 homolog	1	ELFPVFTQLPFPK	ELFPVFTQLPFPK	2	ELFPVFTQLPFPK2	9648.79	3066.38	2571.48
Q75Q40	Q75Q40	TOM40_RAT	Tomm40	Mitochondrial import receptor subunit TOM40 homolog	1	ELFPVQMEGVK	ELFPVQMEGVK	2	ELFPVQMEGVK2	122074	99783.6	107247
Q62833	Q62833	GRK5_RAT	Grk5	G protein-coupled receptor kinase 5	1	ELFSACAQSVHDYLK	ELFSAC(UniMod:4)AQSVHDYLK	3	ELFSAC(UniMod:4)AQSVHDYLK3	5311.93	3464.93	5677.33
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	ELFSDGFSIHHAGMLR	ELFSDGFSIHHAGMLR	3	ELFSDGFSIHHAGMLR3	7375.64	6655.56	6533.33
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	ELFSDGFSIHHAGMLR	ELFSDGFSIHHAGMLR	4	ELFSDGFSIHHAGMLR4	25316.6	20678.9	13979.1
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	ELFSNHQWVSEESCEDEDILAR	ELFSNHQWVSEESC(UniMod:4)EDEDILAR	3	ELFSNHQWVSEESC(UniMod:4)EDEDILAR3	2758.22	6659.19	2662.18
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	ELFSNHQWVSEESCEDEDILAREESR	ELFSNHQWVSEESC(UniMod:4)EDEDILAREESR	4	ELFSNHQWVSEESC(UniMod:4)EDEDILAREESR4	9617.5	13892.2	8169.9
Q3KRE2	Q3KRE2	Q3KRE2_RAT	Mettl7a	Methyltransferase like 7A	1	ELFSNLQEFAGPSGK	ELFSNLQEFAGPSGK	2	ELFSNLQEFAGPSGK2	7306.01	5468.02	11904.6
O35264	O35264	PA1B2_RAT	Pafah1b2	Platelet-activating factor acetylhydrolase IB subunit alpha2	1	ELFSPLHALNFGIGGDTTR	ELFSPLHALNFGIGGDTTR	3	ELFSPLHALNFGIGGDTTR3	17516.4	10894.5	5567.42
P51792	P51792	CLCN3_RAT	Clcn3	H(+)/Cl(-) exchange transporter 3	1	ELFTDCGPLESSSLCDYR	ELFTDC(UniMod:4)GPLESSSLC(UniMod:4)DYR	3	ELFTDC(UniMod:4)GPLESSSLC(UniMod:4)DYR3	3626.59		1019.59
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	ELFTGVPDQPSAAMSWQDGQVYFFK	ELFTGVPDQPSAAMSWQDGQVYFFK	3	ELFTGVPDQPSAAMSWQDGQVYFFK3	14253.8	10912.1	9725.85
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	ELFVDSGLLR	ELFVDSGLLR	2	ELFVDSGLLR2	34543.8	37767.1	39339
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	ELFVIHK	ELFVIHK	2	ELFVIHK2	3887.85	2983.34	3739.84
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	ELFVMAR	ELFVMAR	2	ELFVMAR2	264590	236966	228207
A0A8I5ZYD8	A0A8I5ZYD8	A0A8I5ZYD8_RAT	Fhl3	Four and a half LIM domains 3	1	ELFYEDR	ELFYEDR	2	ELFYEDR2	373776	340045	350448
Q9TPX1	Q9TPX1;A0A8I5Y7C4	Q9TPX1_RAT	Slfn4	Schlafen family member 4	0	ELGAELK	ELGAELK	1	ELGAELK1	19978.6		12218.7
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	ELGAFGLQVPSELGGLGLSNTQYAR	ELGAFGLQVPSELGGLGLSNTQYAR	3	ELGAFGLQVPSELGGLGLSNTQYAR3			23705.2
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	ELGATMDGFHR	ELGATMDGFHR	2	ELGATMDGFHR2	7389.91		3099.9
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	ELGATMDGFHR	ELGATMDGFHR	3	ELGATMDGFHR3	15662.4	26063.6	28655.3
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	ELGCGGALAAPGGAFFGEGAGPIILDDLR	ELGC(UniMod:4)GGALAAPGGAFFGEGAGPIILDDLR	3	ELGC(UniMod:4)GGALAAPGGAFFGEGAGPIILDDLR3	2861.49	2412.92	5220.93
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	ELGCGGALAAPGGAR	ELGC(UniMod:4)GGALAAPGGAR	2	ELGC(UniMod:4)GGALAAPGGAR2	36294.7	46627.8	31680
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	ELGCGGPR	ELGC(UniMod:4)GGPR	2	ELGC(UniMod:4)GGPR2	60048.9	83570.4	72792.1
Q9WTS8	Q9WTS8	FCN1_RAT	Fcn1	Ficolin-1	1	ELGDALCR	ELGDALC(UniMod:4)R	2	ELGDALC(UniMod:4)R2	138957	130691	126188
Q3MHU5	Q3MHU5	RETR2_RAT	Retreg2	Reticulophagy regulator 2	1	ELGDGEETELAPPEDLLSAPPALSK	ELGDGEETELAPPEDLLSAPPALSK	3	ELGDGEETELAPPEDLLSAPPALSK3	9752.08	10843.3	11098.4
P19132	A0A8I5ZU81;P19132;A0A8I6AJZ3	FRIH_RAT	Fth1	Ferritin heavy chain	0	ELGDHVTNLR	ELGDHVTNLR	3	ELGDHVTNLR3	42595	35639.8	42275.4
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	ELGDIQGHSRPVNEEAEPSEVDAAGR	ELGDIQGHSRPVNEEAEPSEVDAAGR	3	ELGDIQGHSRPVNEEAEPSEVDAAGR3	3297.68	6331.93	
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	ELGDIQGHSRPVNEEAEPSEVDAAGR	ELGDIQGHSRPVNEEAEPSEVDAAGR	4	ELGDIQGHSRPVNEEAEPSEVDAAGR4	27334.6	27244.4	31646.4
Q9QWG5	Q9QWG5	INP4B_RAT	Inpp4b	Type II inositol 3,4-bisphosphate 4-phosphatase	1	ELGDLSPHWDNLR	ELGDLSPHWDNLR	3	ELGDLSPHWDNLR3	20856.7	24809.4	16526
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	ELGDYFVFDPK	ELGDYFVFDPK	2	ELGDYFVFDPK2	114644	113681	124038
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	ELGENLDQILR	ELGENLDQILR	2	ELGENLDQILR2	22389	20313.7	23714.3
A0A1W2Q5Z7	A0A1W2Q5Z7	A0A1W2Q5Z7_RAT	St3gal1	ST3 beta-galactoside alpha-2,3-sialyltransferase 1	1	ELGENVNMVLVPFK	ELGENVNMVLVPFK	2	ELGENVNMVLVPFK2	15765.1	25712.8	21659.4
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	ELGEYGLQAYTEVK	ELGEYGLQAYTEVK	2	ELGEYGLQAYTEVK2	33995.9	24163.3	27746
D3ZP82	D3ZP82	D3ZP82_RAT	Loxl3	Lysyl oxidase homolog	1	ELGFGTAR	ELGFGTAR	2	ELGFGTAR2		9779.28	11746
D3ZP82	D3ZP82	D3ZP82_RAT	Loxl3	Lysyl oxidase homolog	1	ELGFTEATGWTHSAK	ELGFTEATGWTHSAK	3	ELGFTEATGWTHSAK3	9076.95	7456.74	6912.92
A0A0G2K7G2	A0A0G2K7G2	A0A0G2K7G2_RAT	Agfg2	ArfGAP with FG repeats 2	1	ELGGCSQAGNR	ELGGC(UniMod:4)SQAGNR	2	ELGGC(UniMod:4)SQAGNR2	12423.6	5696.55	8736.17
O35964	O35964	SH3G1_RAT	Sh3gl1	Endophilin-A2	1	ELGGESNFGDALLDAGESMK	ELGGESNFGDALLDAGESMK	3	ELGGESNFGDALLDAGESMK3	54702.4	49833.2	56646.1
B1WBW4	B1WBW4	ARM10_RAT	Armc10	Armadillo repeat-containing protein 10	1	ELGGIPIVGSK	ELGGIPIVGSK	2	ELGGIPIVGSK2	109040	105210	128713
D3ZN06	D3ZN06	D3ZN06_RAT	Cd248	CD248 molecule	1	ELGGNLATPR	ELGGNLATPR	2	ELGGNLATPR2	1.24912e+06	1.32845e+06	1.19013e+06
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	ELGGPGPSVR	ELGGPGPSVR	2	ELGGPGPSVR2	9568.27	11950	14289.2
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	ELGGRLDLLEEQVAGAVR	ELGGRLDLLEEQVAGAVR	3	ELGGRLDLLEEQVAGAVR3	16629.3	19030.4	16461.5
Q63707	Q63707	PYRD_RAT	Dhodh	Dihydroorotate dehydrogenase (quinone), mitochondrial	1	ELGIDGLIVTNTTVSRPVGLQGALR	ELGIDGLIVTNTTVSRPVGLQGALR	3	ELGIDGLIVTNTTVSRPVGLQGALR3	4374.35	4972.14	
M0RD40	M0RD40	M0RD40_RAT	Sik3	non-specific serine/threonine protein kinase	1	ELGIHPYGHQPTATTFSR	ELGIHPYGHQPTATTFSR	4	ELGIHPYGHQPTATTFSR4		2625.12	
Q32Q07	Q32Q07	LRRN1_RAT	Lrrn1	Leucine-rich repeat neuronal protein 1	1	ELGINNMGELVSVDR	ELGINNMGELVSVDR	2	ELGINNMGELVSVDR2	8262.12	5819.61	4422.02
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	ELGISPIMTGK	ELGISPIMTGK	2	ELGISPIMTGK2	14912.9	11302.6	16097.4
P13471	D4A290;F1MA00;P13471	RS14_RAT	Rps14	Small ribosomal subunit protein uS11	0	ELGITALHIK	ELGITALHIK	2	ELGITALHIK2	3817.81		4650.31
D4A3E2	D4A3E2	D4A3E2_RAT	Npepl1	Aminopeptidase-like 1	1	ELGITPTIIR	ELGITPTIIR	2	ELGITPTIIR2	8182.2	5835.15	10868
D4A3E2	D4A3E2	D4A3E2_RAT	Npepl1	Aminopeptidase-like 1	1	ELGITPTIIRDEQLK	ELGITPTIIRDEQLK	3	ELGITPTIIRDEQLK3	56889.7	63843.6	68247
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	ELGIWEPLAVK	ELGIWEPLAVK	2	ELGIWEPLAVK2	418487	421909	445563
D3ZW38	D3ZW38	D3ZW38_RAT	Exosc6	Exosome component 6	1	ELGLALQEALEPAVR	ELGLALQEALEPAVR	2	ELGLALQEALEPAVR2	9193.33		5407.45
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	ELGLNADLFQPASLVR	ELGLNADLFQPASLVR	2	ELGLNADLFQPASLVR2	17025.8	27403.6	26484
B4F7E7	B4F7E7	PALS1_RAT	Pals1	Protein PALS1	1	ELGLSFQK	ELGLSFQK	2	ELGLSFQK2	15841.4	24743.3	24451.4
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	ELGLSSVPASGGLVGVYNGK	ELGLSSVPASGGLVGVYNGK	2	ELGLSSVPASGGLVGVYNGK2	30106.8	30363.5	31753.1
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	ELGLSSVPASGGLVGVYNGK	ELGLSSVPASGGLVGVYNGK	3	ELGLSSVPASGGLVGVYNGK3	16168.2	29807.9	19739.1
B0K017	B0K017	B0K017_RAT	Adprs	ADP-ribosylserine hydrolase	1	ELGMEERPYSSR	ELGMEERPYSSR	3	ELGMEERPYSSR3	28793	16780.1	14417.9
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	ELGNDAYK	ELGNDAYK	2	ELGNDAYK2	13865.3	11984	9739.5
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	ELGNDAYKK	ELGNDAYKK	2	ELGNDAYKK2	6663.77	7839.61	
A0A8I6AC50	A0A8I6AC50	A0A8I6AC50_RAT	Ttc13	Tetratricopeptide repeat domain 13	1	ELGNFEAATESFQK	ELGNFEAATESFQK	2	ELGNFEAATESFQK2	3911.48	4731.81	
D3ZE72	D3ZE72	D3ZE72_RAT	Metap1	Methionine aminopeptidase	1	ELGNIIQK	ELGNIIQK	2	ELGNIIQK2	8166.11	3799.4	
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	ELGPNSSK	ELGPNSSK	2	ELGPNSSK2	58133.2	35802.8	45107.7
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	ELGPYSSK	ELGPYSSK	1	ELGPYSSK1	22922	20067.3	19101.2
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	ELGPYSSK	ELGPYSSK	2	ELGPYSSK2	3.33949e+06	3.73244e+06	3.83432e+06
A1L134	A1L134	AUP1_RAT	Aup1	Lipid droplet-regulating VLDL assembly factor AUP1	1	ELGQIGTR	ELGQIGTR	2	ELGQIGTR2	89920.9	59705.4	151389
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	ELGQTLIDGGILDDIISEK	ELGQTLIDGGILDDIISEK	3	ELGQTLIDGGILDDIISEK3	3366.61	9516.43	6869.73
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	ELGSASVISWNHHEFEVK	ELGSASVISWNHHEFEVK	3	ELGSASVISWNHHEFEVK3	4405.91	3912.74	
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	ELGSASVISWNHHEFEVK	ELGSASVISWNHHEFEVK	4	ELGSASVISWNHHEFEVK4	16408.8	6154.9	16011.5
Q641Y0	Q641Y0	OST48_RAT	Ddost	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit	1	ELGSECGIEFDEEK	ELGSEC(UniMod:4)GIEFDEEK	2	ELGSEC(UniMod:4)GIEFDEEK2	9097.37	10917.4	10715.3
G3V828	G3V828	G3V828_RAT	Cnpy3	Canopy FGF signaling regulator 3	1	ELGSLEEDANPDEEGVQK	ELGSLEEDANPDEEGVQK	2	ELGSLEEDANPDEEGVQK2	1712.75	1568.31	
G3V7P1	G3V7P1	STX12_RAT	Stx12	Syntaxin-12	1	ELGSLPLPLSASEQR	ELGSLPLPLSASEQR	2	ELGSLPLPLSASEQR2	289696	325215	300639
G3V7P1	G3V7P1	STX12_RAT	Stx12	Syntaxin-12	1	ELGSLPLPLSASEQR	ELGSLPLPLSASEQR	3	ELGSLPLPLSASEQR3	6185.91	1571.43	
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	ELGSPPGISLDTIDAAFSCPGSSK	ELGSPPGISLDTIDAAFSC(UniMod:4)PGSSK	3	ELGSPPGISLDTIDAAFSC(UniMod:4)PGSSK3	461038	502123	467058
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	ELGSSVALYSR	ELGSSVALYSR	2	ELGSSVALYSR2	24474.8	18496	15256.6
P16573	P16573	CEAM1_RAT	Ceacam1	Carcinoembryonic antigen-related cell adhesion molecule 1	1	ELGSVTLTCFSK	ELGSVTLTC(UniMod:4)FSK	2	ELGSVTLTC(UniMod:4)FSK2	130120	153997	167606
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	ELGTGQFGVVK	ELGTGQFGVVK	2	ELGTGQFGVVK2	37692.1	59577	46687.6
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	ELGTIQQVISER	ELGTIQQVISER	2	ELGTIQQVISER2	25005.1	16715.1	16378.1
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	ELGTLHEEETQEGSQK	ELGTLHEEETQEGSQK	2	ELGTLHEEETQEGSQK2	7941.05	5441.94	2777.63
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	ELGTLHEEETQEGSQK	ELGTLHEEETQEGSQK	3	ELGTLHEEETQEGSQK3	129928	129808	123792
P55053	P55053	FABP5_RAT	Fabp5	Fatty acid-binding protein 5	1	ELGVGLALR	ELGVGLALR	2	ELGVGLALR2	61153.4	32264.1	35735.7
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	ELGVHYSR	ELGVHYSR	2	ELGVHYSR2	5173.5	6595.31	7046.19
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	ELGYVTLMCGDGTNDVGALK	ELGYVTLMC(UniMod:4)GDGTNDVGALK	3	ELGYVTLMC(UniMod:4)GDGTNDVGALK3	1789.07	1317.28	1680.93
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	ELHAHLLAQDK	ELHAHLLAQDK	2	ELHAHLLAQDK2	7008.62	1520.07	3056.36
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	ELHAHLLAQDK	ELHAHLLAQDK	3	ELHAHLLAQDK3	27331.2	25690.9	26755.9
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	ELHEVCHLLEQER	ELHEVC(UniMod:4)HLLEQER	3	ELHEVC(UniMod:4)HLLEQER3	4677.74		
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	ELHGEVIR	ELHGEVIR	2	ELHGEVIR2	28533.6	26728.5	23071.4
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	ELHINLIPNK	ELHINLIPNK	2	ELHINLIPNK2	217994	262512	172135
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	ELHINLIPNK	ELHINLIPNK	3	ELHINLIPNK3	1.45669e+06	1.62715e+06	1.62191e+06
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	ELHINLIPNKQDR	ELHINLIPNKQDR	2	ELHINLIPNKQDR2	22855.1	19194.5	15394
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	ELHINLIPNKQDR	ELHINLIPNKQDR	3	ELHINLIPNKQDR3	355183	389800	293569
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	ELHINLIPNKQDR	ELHINLIPNKQDR	4	ELHINLIPNKQDR4	424104	592876	597941
D4A8F2	D4A8F2	D4A8F2_RAT	Rsu1	Ras suppressor protein 1	1	ELHIQGNR	ELHIQGNR	2	ELHIQGNR2	124530	54983.1	55006.9
P50609	P50609	FMOD_RAT	Fmod	Fibromodulin	1	ELHLDHNQISR	ELHLDHNQISR	3	ELHLDHNQISR3	24253.9	24892.6	15009.9
P47853	Q01129;P47853	PGS1_RAT	Bgn	Biglycan	0	ELHLDNNK	ELHLDNNK	2	ELHLDNNK2	51336.5	48765	40219
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	ELHLLGVQVQQFQDVATR	ELHLLGVQVQQFQDVATR	3	ELHLLGVQVQQFQDVATR3	10045.8	10965.9	25284.1
P29315	P29315	RINI_RAT	Rnh1	Ribonuclease inhibitor	1	ELHLNDNPLGDEGLK	ELHLNDNPLGDEGLK	3	ELHLNDNPLGDEGLK3	107866	73145.7	88834.2
D3ZCI3	D3ZCI3	D3ZCI3_RAT	Arhgap30	Rho GTPase activating protein 30	1	ELHPAVPLVVPQR	ELHPAVPLVVPQR	3	ELHPAVPLVVPQR3		2382.21	2952.5
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	ELHPLFDETFEFLVPAEPCQK	ELHPLFDETFEFLVPAEPC(UniMod:4)QK	3	ELHPLFDETFEFLVPAEPC(UniMod:4)QK3	90569.9	85581.1	77307.8
D3ZXY2	D3ZXY2	D3ZXY2_RAT	Pdzd8	PDZ domain containing 8	1	ELHVVEEVSTLPK	ELHVVEEVSTLPK	3	ELHVVEEVSTLPK3	8158.99	6511.28	
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	ELIAEAK	ELIAEAK	2	ELIAEAK2	241283	261297	288282
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	ELIAQTR	ELIAQTR	2	ELIAQTR2	45508.8	42210.7	42291.9
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	ELICGACSDVSR	ELIC(UniMod:4)GAC(UniMod:4)SDVSR	2	ELIC(UniMod:4)GAC(UniMod:4)SDVSR2	15020.9	16382.8	21523.8
D3ZJR7	D3ZJR7	D3ZJR7_RAT	Dsc2	Desmocollin 2	1	ELIDKYQLIIK	ELIDKYQLIIK	3	ELIDKYQLIIK3		4148.83	2905.27
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	ELIECAR	ELIEC(UniMod:4)AR	2	ELIEC(UniMod:4)AR2	572071	512180	497393
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	ELIEELHPIIK	ELIEELHPIIK	2	ELIEELHPIIK2	11127.6	10035.4	6217.45
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	ELIEELHPIIK	ELIEELHPIIK	3	ELIEELHPIIK3	66074.5	60801.2	58576.2
P35435	P35435	ATPG_RAT	Atp5f1c	ATP synthase subunit gamma, mitochondrial	1	ELIEIISGAAALD	ELIEIISGAAALD	2	ELIEIISGAAALD2	18694	19301.1	20773.2
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	ELIEPVLTCFNDADSR	ELIEPVLTC(UniMod:4)FNDADSR	2	ELIEPVLTC(UniMod:4)FNDADSR2	18338.6	16270.6	14990.7
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	ELIEPVLTCFNDADSR	ELIEPVLTC(UniMod:4)FNDADSR	3	ELIEPVLTC(UniMod:4)FNDADSR3	6091.21	3423.66	7196.63
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	ELIEQLQNKPSDLGTK	ELIEQLQNKPSDLGTK	2	ELIEQLQNKPSDLGTK2	3340.21	3123.22	2596.76
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	ELIEQLQNKPSDLGTK	ELIEQLQNKPSDLGTK	3	ELIEQLQNKPSDLGTK3	68671.3	69193.7	58791
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	ELIESAEGICSSDR	ELIESAEGIC(UniMod:4)SSDR	2	ELIESAEGIC(UniMod:4)SSDR2	3721.14	5181.4	4130.22
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ELIESSR	ELIESSR	2	ELIESSR2	43150.7	47804.2	44874.7
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ELIESSRDDTTWVK	ELIESSRDDTTWVK	3	ELIESSRDDTTWVK3	34695.2	48376.2	40668
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	ELIFEETAR	ELIFEETAR	2	ELIFEETAR2	131974	116284	111228
P21708	P21708	MK03_RAT	Mapk3	Mitogen-activated protein kinase 3	1	ELIFQETAR	ELIFQETAR	2	ELIFQETAR2	20404.6	17641.8	10443.9
F1LU71	F1LU71	AUHM_RAT	Auh	Methylglutaconyl-CoA hydratase, mitochondrial	1	ELIFSAR	ELIFSAR	2	ELIFSAR2	200861	204093	
D3ZIL6	D3ZIL6	D3ZIL6_RAT	Echdc2	Enoyl CoA hydratase domain containing 2	1	ELIFTGR	ELIFTGR	2	ELIFTGR2			189111
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	ELIIGDR	ELIIGDR	2	ELIIGDR2	949463	962396	1.29616e+06
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	ELIIHQK	ELIIHQK	2	ELIIHQK2	124019	88093.6	85655.5
P58751	P58751	RELN_RAT	Reln	Reelin	1	ELIIQPGYMMQFK	ELIIQPGYMMQFK	2	ELIIQPGYMMQFK2	59663.4	101339	82169.5
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	ELIKAIQVYYNPDQPPKPGMIEGATQK	ELIKAIQVYYNPDQPPKPGMIEGATQK	4	ELIKAIQVYYNPDQPPKPGMIEGATQK4	6608.28	9093.68	2692.6
D4AB50	D4AB50;A0A8I6APL5	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	0	ELIKDGK	ELIKDGK	2	ELIKDGK2	6995.79		
P53676	P53678;P53676	AP3M1_RAT	Ap3m1	AP-3 complex subunit mu-1	0	ELIKPPTILR	ELIKPPTILR	3	ELIKPPTILR3	29564.9	24531.7	42482.1
P51794	P51794	CLCN4_RAT	Clcn4	H(+)/Cl(-) exchange transporter 4	1	ELILAIK	ELILAIK	2	ELILAIK2	31187.9	38282.1	27450.4
Q91ZW1	Q91ZW1	TFAM_RAT	Tfam	Transcription factor A, mitochondrial	1	ELILLGKPK	ELILLGKPK	2	ELILLGKPK2	5353.98	1641.38	5355.25
D3ZWG9	D3ZWG9	D3ZWG9_RAT	Ptar1	Protein prenyltransferase alpha subunit repeat containing 1	1	ELILSGTLSPVK	ELILSGTLSPVK	2	ELILSGTLSPVK2	8698.44	2353.15	7396.15
F1M943	F1M943	F1M943_RAT	Armc8	Armadillo repeat-containing protein 8	1	ELIMTNDDILQK	ELIMTNDDILQK	2	ELIMTNDDILQK2	5795.56	6867.22	11171.9
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	ELINQAR	ELINQAR	2	ELINQAR2	38620.4	54724.4	53428.6
D3ZXK7	D3ZXK7	RN123_RAT	Rnf123	E3 ubiquitin-protein ligase RNF123	1	ELIPTTWWPHR	ELIPTTWWPHR	3	ELIPTTWWPHR3	7865.56	7172.05	8846.61
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	ELIQNAEDAGATEVK	ELIQNAEDAGATEVK	2	ELIQNAEDAGATEVK2	852.783	1741.6	
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	ELIQNVK	ELIQNVK	2	ELIQNVK2	8876.77	6835.75	9008.43
Q6AYE2	Q6AYE2	SHLB1_RAT	Sh3glb1	Endophilin-B1	1	ELIQTSALNFLTPLR	ELIQTSALNFLTPLR	2	ELIQTSALNFLTPLR2	24735.2	13197.3	24939.8
P97521	P97521	MCAT_RAT	Slc25a20	Mitochondrial carnitine/acylcarnitine carrier protein	1	ELIREEGVTSLYK	ELIREEGVTSLYK	2	ELIREEGVTSLYK2	3281.65	1846.4	4172.23
P97521	P97521	MCAT_RAT	Slc25a20	Mitochondrial carnitine/acylcarnitine carrier protein	1	ELIREEGVTSLYK	ELIREEGVTSLYK	3	ELIREEGVTSLYK3	55978.3	61206.2	77948.3
Q9QWG5	Q9QWG5	INP4B_RAT	Inpp4b	Type II inositol 3,4-bisphosphate 4-phosphatase	1	ELISLHIK	ELISLHIK	2	ELISLHIK2	3829.75	5508.62	3060.36
Q66HD0	P34058;Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	0	ELISNASDALDK	ELISNASDALDK	2	ELISNASDALDK2	1.95733e+06	1.97215e+06	1.79585e+06
Q66HD0	P34058;Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	0	ELISNASDALDKIR	ELISNASDALDKIR	2	ELISNASDALDKIR2	55203.6	47395.6	48723.1
Q66HD0	P34058;Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	0	ELISNASDALDKIR	ELISNASDALDKIR	3	ELISNASDALDKIR3	1.72297e+06	2.17968e+06	2.01556e+06
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	ELISNASDALEK	ELISNASDALEK	2	ELISNASDALEK2	54544	47664.4	66152
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	ELISNSSDALDK	ELISNSSDALDK	2	ELISNSSDALDK2	172431	187043	174234
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	ELISNSSDALDKIR	ELISNSSDALDKIR	2	ELISNSSDALDKIR2	4729.3	8669.69	2441.93
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	ELISNSSDALDKIR	ELISNSSDALDKIR	3	ELISNSSDALDKIR3	148625	207617	204040
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	ELISQLR	ELISQLR	2	ELISQLR2	106596	109145	83855
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	ELISSGTFNIEQIEEK	ELISSGTFNIEQIEEK	2	ELISSGTFNIEQIEEK2	6664.56	12312.9	3903.49
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	ELISVDTEQSNFYLR	ELISVDTEQSNFYLR	2	ELISVDTEQSNFYLR2	682369	123868	107779
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	ELISVDTEQSNFYLR	ELISVDTEQSNFYLR	3	ELISVDTEQSNFYLR3	74107.3	46093.1	38422.3
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	ELITEGMEIK	ELITEGMEIK	2	ELITEGMEIK2	127357	168858	143978
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	ELIVGEIFVR	ELIVGEIFVR	2	ELIVGEIFVR2	27772.6	12726.1	8989.93
Q9JLZ1	Q9JLZ1	GLRX3_RAT	Glrx3	Glutaredoxin-3	1	ELKDNGELLPILK	ELKDNGELLPILK	3	ELKDNGELLPILK3	48102.2	43131.4	50404.9
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	ELKDPHPLEGEPNSSR	ELKDPHPLEGEPNSSR	3	ELKDPHPLEGEPNSSR3	8928.36	14501.7	11377.8
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	ELKDPHPLEGEPNSSR	ELKDPHPLEGEPNSSR	4	ELKDPHPLEGEPNSSR4	13161.9	8523.59	13675.6
Q6GQP4	Q6GQP4	RAB31_RAT	Rab31	Ras-related protein Rab-31	1	ELKEHGPENIVMAIAGNK	ELKEHGPENIVMAIAGNK	4	ELKEHGPENIVMAIAGNK4	4168.52	4460.6	3113.03
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	ELKEPVGQIVCTDK	ELKEPVGQIVC(UniMod:4)TDK	3	ELKEPVGQIVC(UniMod:4)TDK3	7793.44	7977.94	7839.72
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	ELKPTGSPGCSR	ELKPTGSPGC(UniMod:4)SR	2	ELKPTGSPGC(UniMod:4)SR2	24692.9	73602.9	52528.3
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	ELKPTGSPGCSR	ELKPTGSPGC(UniMod:4)SR	3	ELKPTGSPGC(UniMod:4)SR3	285086	303822	294009
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	ELKPVLSQG	ELKPVLSQG	2	ELKPVLSQG2	27549.8	29730.8	29158.7
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	ELLAEAK	ELLAEAK	2	ELLAEAK2	218128	207867	207804
Q5M9G9	Q5M9G9	FAKD4_RAT	Tbrg4	FAST kinase domain-containing protein 4	1	ELLAELLR	ELLAELLR	2	ELLAELLR2	17735	20379.3	20146.2
A0A0G2JT44	A0A0G2JT44	A0A0G2JT44_RAT	Tmc6	Transmembrane channel-like protein	1	ELLAEWQLR	ELLAEWQLR	2	ELLAEWQLR2	39960	46362	61629.1
Q9R010	Q9R010	CIB1_RAT	Cib1	Calcium and integrin-binding protein 1	1	ELLAEYQDLTFLTK	ELLAEYQDLTFLTK	2	ELLAEYQDLTFLTK2	30403.7	38558.1	23665.7
A0A0G2JVL5	A0A0G2JVL5	A0A0G2JVL5_RAT	Rimoc1	Similar to expressed sequence AW549877	1	ELLAFLSEPEILAK	ELLAFLSEPEILAK	2	ELLAFLSEPEILAK2	6793.65	7037.12	6814.1
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	ELLAFQTPEK	ELLAFQTPEK	2	ELLAFQTPEK2	104689	115076	111282
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	ELLAFQTPEKK	ELLAFQTPEKK	2	ELLAFQTPEKK2	11710.1	10284.4	4930.78
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	ELLAFQTPEKK	ELLAFQTPEKK	3	ELLAFQTPEKK3	83170.1	88798.1	90774.4
D3ZQ30	D3ZQ30	D3ZQ30_RAT	Telo2	Telomere length regulation protein TEL2 homolog	1	ELLALAAPGPASDCSLEAR	ELLALAAPGPASDC(UniMod:4)SLEAR	2	ELLALAAPGPASDC(UniMod:4)SLEAR2	4964.14	6768.24	
F7EM42	F7EM42	F7EM42_RAT	Sash3	SAM and SH3 domain containing 3	1	ELLALSR	ELLALSR	2	ELLALSR2	61740.9	73598.6	62624
Q9JLH7	Q9JLH7	CK5P3_RAT	Cdk5rap3	CDK5 regulatory subunit-associated protein 3	1	ELLALVK	ELLALVK	2	ELLALVK2	53453.4	47644.8	48270.9
A0A8I6A6H8	A0A8I6A6H8	A0A8I6A6H8_RAT	Serpinb6a	Serpin family B member 6A	1	ELLAPGIVDPDTVLVLVNAIYFK	ELLAPGIVDPDTVLVLVNAIYFK	3	ELLAPGIVDPDTVLVLVNAIYFK3	8470.36	7514.37	5880.64
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	ELLASIDSLVK	ELLASIDSLVK	2	ELLASIDSLVK2	53017.3	50852.5	47083.3
A0A8J8XL70	A0A8J8XL70	A0A8J8XL70_RAT	Serpinf1	Serpin family F member 1	1	ELLASVTAPEK	ELLASVTAPEK	2	ELLASVTAPEK2	146514	151947	132761
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	ELLAVACEQFLGK	ELLAVAC(UniMod:4)EQFLGK	2	ELLAVAC(UniMod:4)EQFLGK2	5080.94	6707.91	15462.2
A0A0G2K931	A0A8I5Y182;A0A0G2K931	A0A0G2K931_RAT	Psat1	Phosphoserine aminotransferase	0	ELLAVPNNYK	ELLAVPNNYK	2	ELLAVPNNYK2	7716.41	15770.6	8265.2
Q4V884	Q4V884	Q4V884_RAT	Cdc16	CDC16 cell division cycle 16 homolog (S. cerevisiae)	1	ELLDSLPLSK	ELLDSLPLSK	2	ELLDSLPLSK2	8338.92	10116.4	8254.44
P18292	P18292	THRB_RAT	F2	Prothrombin	1	ELLDSYIDGR	ELLDSYIDGR	2	ELLDSYIDGR2	721587	721472	753108
P18292	P18292	THRB_RAT	F2	Prothrombin	1	ELLDSYIDGR	ELLDSYIDGR	3	ELLDSYIDGR3	50073.4	51051.4	50574.5
Q6NX65	Q6NX65	PDC10_RAT	Pdcd10	Programmed cell death protein 10	1	ELLDTVNNVFKK	ELLDTVNNVFKK	3	ELLDTVNNVFKK3	4471.99	6504.27	6852.67
A0A8I5ZUS1	A0A8I5ZUS1	A0A8I5ZUS1_RAT	Map3k4	Mitogen activated protein kinase kinase kinase 4	1	ELLDVLR	ELLDVLR	2	ELLDVLR2	10951.9		5398.35
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	ELLEATAQK	ELLEATAQK	2	ELLEATAQK2	26417.6	19911.2	17029.5
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	ELLEEMQSLK	ELLEEMQSLK	2	ELLEEMQSLK2	31940.3	26501.2	33952.6
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	ELLEEMQSLKK	ELLEEMQSLKK	2	ELLEEMQSLKK2	3124.02		1892.91
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	ELLEEMQSLKK	ELLEEMQSLKK	3	ELLEEMQSLKK3	66321.6	74249.3	58420.3
Q6IG01	Q6IG01	K2C1B_RAT	Krt77	Keratin, type II cytoskeletal 1b	1	ELLEGEESR	ELLEGEESR	2	ELLEGEESR2	31105	23883.5	17717.8
P18298	P18298	METK2_RAT	Mat2a	S-adenosylmethionine synthase isoform type-2	1	ELLEIVK	ELLEIVK	2	ELLEIVK2	33776.7	31643.6	32603
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	ELLELEAMSMAVESTGNAK	ELLELEAMSMAVESTGNAK	3	ELLELEAMSMAVESTGNAK3	36030.1	29073.4	48091.4
D3Z916	D3Z916	D3Z916_RAT	Mindy3	Ubiquitin carboxyl-terminal hydrolase MINDY	1	ELLELVWGTK	ELLELVWGTK	2	ELLELVWGTK2	6702.96	4612.23	1839.69
E9PU15	E9PU15	E9PU15_RAT	Dicer1	Endoribonuclease Dicer	1	ELLEMEPETAK	ELLEMEPETAK	2	ELLEMEPETAK2	1616.31	10295.2	
Q642B0	Q642B0;A0A096MJY1	Q642B0_RAT	Gpc4	Glypican 4	0	ELLENAEK	ELLENAEK	2	ELLENAEK2	55685.2	51129.5	36565.6
D3Z9Y3	D3Z9Y3	D3Z9Y3_RAT	Cerk	Ceramide kinase	1	ELLENLTSRPK	ELLENLTSRPK	3	ELLENLTSRPK3	2759.66	3936.67	
D3ZF97	D3ZF97	D3ZF97_RAT	Erlec1	Endoplasmic reticulum lectin	1	ELLEPLFK	ELLEPLFK	2	ELLEPLFK2	27411.1	26112.5	25915.1
Q9JI51	Q9JI51	VTI1A_RAT	Vti1a	Vesicle transport through interaction with t-SNAREs homolog 1A	1	ELLEQMDLEVR	ELLEQMDLEVR	2	ELLEQMDLEVR2	25674.7	13197.4	24397.1
D3ZSY8	D3ZSY8	D3ZSY8_RAT	Tbc1d10b	TBC1 domain family, member 10b	1	ELLEQNPGK	ELLEQNPGK	2	ELLEQNPGK2	61882.3	75921.3	61583.4
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	ELLESNFTLVGDDGTNK	ELLESNFTLVGDDGTNK	2	ELLESNFTLVGDDGTNK2	13269.4	7734.48	10035.1
A0A0G2K8N6	A0A0G2K8N6	A0A0G2K8N6_RAT	Ankmy2	Ankyrin repeat and MYND domain containing 2	1	ELLEVIGK	ELLEVIGK	2	ELLEVIGK2	8715.55	13103.3	10845.4
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	ELLEYDLQQR	ELLEYDLQQR	2	ELLEYDLQQR2	40530	45130.7	21511.4
D4A748	D4A748	D4A748_RAT	Wdfy4	WDFY family member 4	1	ELLFGVSSPK	ELLFGVSSPK	2	ELLFGVSSPK2	5760.84	7964.4	6322.35
A0A8I6GAD6	A0A8I6GAD6	A0A8I6GAD6_RAT	Nrbp1	Nuclear receptor binding protein 1	1	ELLFHPALFEVPSLK	ELLFHPALFEVPSLK	2	ELLFHPALFEVPSLK2	26348.8	25331.7	21600.9
A0A8I6GAD6	A0A8I6GAD6	A0A8I6GAD6_RAT	Nrbp1	Nuclear receptor binding protein 1	1	ELLFHPALFEVPSLK	ELLFHPALFEVPSLK	3	ELLFHPALFEVPSLK3	112880	125443	103425
Q5XID7	Q5XID7	ARMX3_RAT	Armcx3	Armadillo repeat-containing X-linked protein 3	1	ELLGAHVPSSLGSLFNK	ELLGAHVPSSLGSLFNK	3	ELLGAHVPSSLGSLFNK3			2132.03
P36576	P36576	ARRC_RAT	Arr3	Arrestin-C (Fragment)	1	ELLGILVSYK	ELLGILVSYK	2	ELLGILVSYK2	15492.7	14065	
D3ZSZ4	D3ZSZ4	D3ZSZ4_RAT	Pgbd5	PiggyBac transposable element derived 5	1	ELLGLEDESPAH	ELLGLEDESPAH	2	ELLGLEDESPAH2	1726.98		4796.9
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	ELLGLQQAEER	ELLGLQQAEER	2	ELLGLQQAEER2	21778.6	20753.6	27316
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	ELLGPVLELEVR	ELLGPVLELEVR	2	ELLGPVLELEVR2	9473.1	11857.2	13893.4
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	ELLGQGLLLR	ELLGQGLLLR	2	ELLGQGLLLR2	137445	125512	155180
Q9WVK3	Q9WVK3	PECR_RAT	Pecr	Peroxisomal trans-2-enoyl-CoA reductase	1	ELLHLGCNVVIASR	ELLHLGC(UniMod:4)NVVIASR	3	ELLHLGC(UniMod:4)NVVIASR3	9349.61	10716.9	9977.82
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	ELLHLNIEQEIR	ELLHLNIEQEIR	2	ELLHLNIEQEIR2	2752.26		2490.41
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	ELLHLNIEQEIR	ELLHLNIEQEIR	3	ELLHLNIEQEIR3	13881.5	13059.2	14126.2
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	ELLIGNEK	ELLIGNEK	1	ELLIGNEK1	316538	303234	309944
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	ELLIGNEK	ELLIGNEK	2	ELLIGNEK2	1.88431e+07	1.94704e+07	1.99724e+07
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	ELLIGNEKVTSTGTSTTR	ELLIGNEKVTSTGTSTTR	3	ELLIGNEKVTSTGTSTTR3	9858.18	4152.08	3135.31
B0BMY6	B0BMY6	B0BMY6_RAT	Otulin	ubiquitinyl hydrolase 1	1	ELLIHER	ELLIHER	2	ELLIHER2	2949.8	6221.91	
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	ELLIIGGVAAR	ELLIIGGVAAR	2	ELLIIGGVAAR2	15736.3	7657.14	17059.4
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	ELLKPNASVALHK	ELLKPNASVALHK	3	ELLKPNASVALHK3	62357.1	57234	62671.9
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	ELLLAEK	ELLLAEK	2	ELLLAEK2	136560	126200	148376
Q9WUK5	Q9WUK5	INHBC_RAT	Inhbc	Inhibin beta C chain	1	ELLLDLAK	ELLLDLAK	2	ELLLDLAK2	84241	79255.1	87829.4
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	ELLLEHQDAYQAGTVFPDAFYPSICK	ELLLEHQDAYQAGTVFPDAFYPSIC(UniMod:4)K	4	ELLLEHQDAYQAGTVFPDAFYPSIC(UniMod:4)K4	67830.2	49505.2	71532.3
Q8R4A1	Q8R4A1	ERO1A_RAT	Ero1a	ERO1-like protein alpha	1	ELLLEILHEVK	ELLLEILHEVK	2	ELLLEILHEVK2	37710	15451.3	
Q8R4A1	Q8R4A1	ERO1A_RAT	Ero1a	ERO1-like protein alpha	1	ELLLEILHEVK	ELLLEILHEVK	3	ELLLEILHEVK3	5382.79		30059.6
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	ELLLGPSIAYTVTELTSQNNR	ELLLGPSIAYTVTELTSQNNR	3	ELLLGPSIAYTVTELTSQNNR3	9083.45	4422.1	11222.7
B2RZ72	B2RZ72	B2RZ72_RAT	Arpc4	Actin-related protein 2/3 complex subunit 4	1	ELLLQPVTISR	ELLLQPVTISR	2	ELLLQPVTISR2	1.52522e+06	1.44427e+06	1.6842e+06
F1LT49	F1LT49	F1LT49_RAT	Lrrc47	Leucine rich repeat containing 47	1	ELLLTGPGLEER	ELLLTGPGLEER	2	ELLLTGPGLEER2	31378.9	22981.2	24558.4
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	ELLLYGR	ELLLYGR	2	ELLLYGR2	18171.7	19354.8	28713.6
D4A0G9	D4A0G9	D4A0G9_RAT	Ercc6l	ERCC excision repair 6 like, spindle assembly checkpoint helicase	1	ELLMETR	ELLMETR	2	ELLMETR2	9109.7	8422.88	6479.16
Q5U4F3	Q5U4F3	F107B_RAT	Fam107b	Protein FAM107B	1	ELLMNQK	ELLMNQK	2	ELLMNQK2	33385.5	38965.9	36329.8
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	ELLMPDTER	ELLMPDTER	2	ELLMPDTER2	26033	35827	27108.2
Q5XI83	Q5XI83	VP35L_RAT	Vps35l	VPS35 endosomal protein-sorting factor-like	1	ELLNLTQQDYVNR	ELLNLTQQDYVNR	2	ELLNLTQQDYVNR2	4429.25	7363.64	3523.69
A0A8J8YNE4	A0A8J8YNE4	A0A8J8YNE4_RAT	Apool	MICOS complex subunit	1	ELLPEPK	ELLPEPK	2	ELLPEPK2	65352.5	63019.9	72406.3
P47727	P47727	CBR1_RAT	Cbr1	Carbonyl reductase [NADPH] 1	1	ELLPIIKPQGR	ELLPIIKPQGR	3	ELLPIIKPQGR3	30253.4	33191.9	27017.4
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	ELLPNGLR	ELLPNGLR	2	ELLPNGLR2	82633.7	97083.1	72806.3
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	ELLPPTALR	ELLPPTALR	2	ELLPPTALR2	40351.2	39916.2	47399.6
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	ELLPVLISAMK	ELLPVLISAMK	2	ELLPVLISAMK2	1.34412e+06	1.3178e+06	1.46504e+06
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	ELLQDISELR	ELLQDISELR	2	ELLQDISELR2	7469.63		6333.49
Q6TMG5	Q6TMG5	NEMO_RAT	Ikbkg	NF-kappa-B essential modulator	1	ELLQEQLEQLQR	ELLQEQLEQLQR	2	ELLQEQLEQLQR2	17590.3	24900.1	16778.9
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	ELLQESALIR	ELLQESALIR	2	ELLQESALIR2	31350.5	24582.3	30229
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ELLQIDGK	ELLQIDGK	1	ELLQIDGK1	10179.2	13535.3	11193.4
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ELLQIDGK	ELLQIDGK	2	ELLQIDGK2	312054	356661	396541
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ELLQIDGKR	ELLQIDGKR	2	ELLQIDGKR2	14214.4	26443.4	19073.5
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	ELLQNADDAK	ELLQNADDAK	2	ELLQNADDAK2	8246.41	8489.49	2826.86
A0A096MJF9	A0A096MJF9	A0A096MJF9_RAT	Tmem132e	Transmembrane protein 132E	1	ELLQPSSTLDIPER	ELLQPSSTLDIPER	2	ELLQPSSTLDIPER2	29029.6	30227.9	28628.6
Q5U2Q4	Q5U2Q4	PAR16_RAT	Parp16	Protein mono-ADP-ribosyltransferase PARP16	1	ELLQSSR	ELLQSSR	2	ELLQSSR2	33174.8	32682.3	35608.3
F7FHP0	F7FHP0	F7FHP0_RAT	Angptl3	Angiopoietin-like 3	1	ELLQSVEEQYK	ELLQSVEEQYK	2	ELLQSVEEQYK2	219237	176006	204126
D3ZAP9	D3ZAP9	D3ZAP9_RAT	Gpd1l1	Glycerol-3-phosphate dehydrogenase [NAD(+)]	1	ELLQTPNFR	ELLQTPNFR	2	ELLQTPNFR2	22889.8	14690.9	32134.5
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	ELLQYGLK	ELLQYGLK	2	ELLQYGLK2	9926.86	14183.4	12011
Q5FWT9	Q5FWT9	SIKE1_RAT	Sike1	Suppressor of IKBKE 1	1	ELLSISSESLQVGK	ELLSISSESLQVGK	2	ELLSISSESLQVGK2	26016.1	22772.2	20225.6
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	ELLSMHHQPDPALTK	ELLSMHHQPDPALTK	3	ELLSMHHQPDPALTK3	14729.1	19163	14979.4
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	ELLSMHHQPDPALTK	ELLSMHHQPDPALTK	4	ELLSMHHQPDPALTK4	16424.2	19065.6	19009.6
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	ELLSNVDQDVHELEK	ELLSNVDQDVHELEK	2	ELLSNVDQDVHELEK2	4061.5	10255.2	8843.44
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	ELLSNVDQDVHELEK	ELLSNVDQDVHELEK	3	ELLSNVDQDVHELEK3	179965	203767	211112
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	ELLSNVDQDVHELEKEAR	ELLSNVDQDVHELEKEAR	3	ELLSNVDQDVHELEKEAR3	19737.8	17295	31632
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	ELLSNVDQDVHELEKEAR	ELLSNVDQDVHELEKEAR	4	ELLSNVDQDVHELEKEAR4	23932	38352.6	21082.6
Q3KR59	Q3KR59	UBP10_RAT	Usp10	Ubiquitin carboxyl-terminal hydrolase 10	1	ELLSPGVK	ELLSPGVK	2	ELLSPGVK2	27314.2	31398.6	20284.5
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	ELLSSDAMK	ELLSSDAMK	2	ELLSSDAMK2	207867	171127	191790
B2RYI0	B2RYI0	WDR91_RAT	Wdr91	WD repeat-containing protein 91	1	ELLSTSSSQTQCAEK	ELLSTSSSQTQC(UniMod:4)AEK	2	ELLSTSSSQTQC(UniMod:4)AEK2	4170.78	1649.75	4856.02
Q9Z1W6	Q9Z1W6	LYRIC_RAT	Mtdh	Protein LYRIC	1	ELLSVGLGFLR	ELLSVGLGFLR	2	ELLSVGLGFLR2	5129.01	6159.42	1887.5
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	ELLTAAVR	ELLTAAVR	2	ELLTAAVR2	14140.4	16592.4	
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	ELLTEFGYK	ELLTEFGYK	2	ELLTEFGYK2	93480.8	110251	119362
P02661	P02661	CASA1_RAT	Csn1s1	Alpha-S1-casein	1	ELLTEQDNEIK	ELLTEQDNEIK	2	ELLTEQDNEIK2	16004.1	20382.1	13281
P29314	D3ZV50;P29314	RS9_RAT	Rps9	Small ribosomal subunit protein uS4	0	ELLTLDEKDPR	ELLTLDEKDPR	2	ELLTLDEKDPR2		10542.3	
P29314	D3ZV50;P29314	RS9_RAT	Rps9	Small ribosomal subunit protein uS4	0	ELLTLDEKDPR	ELLTLDEKDPR	3	ELLTLDEKDPR3	8018.38	14584.2	
P13832	P13832;Q64122;P18666	MRLCA_RAT	Rlc-a	Myosin regulatory light chain RLC-A	0	ELLTTMGDR	ELLTTMGDR	2	ELLTTMGDR2	2.02618e+06	1.99583e+06	2.39332e+06
P13832	P13832;P18666	MRLCA_RAT	Rlc-a	Myosin regulatory light chain RLC-A	0	ELLTTMGDRFTDEEVDELYR	ELLTTMGDRFTDEEVDELYR	3	ELLTTMGDRFTDEEVDELYR3	1.73963e+06	1.80714e+06	1.96309e+06
P13832	P13832;P18666	MRLCA_RAT	Rlc-a	Myosin regulatory light chain RLC-A	0	ELLTTMGDRFTDEEVDELYR	ELLTTMGDRFTDEEVDELYR	4	ELLTTMGDRFTDEEVDELYR4	7877.8	16650.2	4926.06
P13832	P13832;P18666	MRLCA_RAT	Rlc-a	Myosin regulatory light chain RLC-A	0	ELLTTMGDRFTDEEVDELYREAPIDK	ELLTTMGDRFTDEEVDELYREAPIDK	4	ELLTTMGDRFTDEEVDELYREAPIDK4	17800.2	11901	16769.9
Q64122	Q64122	MYL9_RAT	Myl9	Myosin regulatory light polypeptide 9	1	ELLTTMGDRFTDEEVDEMYR	ELLTTMGDRFTDEEVDEMYR	3	ELLTTMGDRFTDEEVDEMYR3	3.24688e+06	3.23362e+06	3.52963e+06
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	ELLTVGQEHWK	ELLTVGQEHWK	2	ELLTVGQEHWK2	8129.87	17306.7	10924.1
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	ELLTVGQEHWK	ELLTVGQEHWK	3	ELLTVGQEHWK3	102802	110548	90539
Q8K3F3	A0A8I6G618;Q8K3F3;A0A8I5ZNE9	PP14B_RAT	Ppp1r14b	Protein phosphatase 1 regulatory subunit 14B	0	ELLVDCYKPTEAFISGLLDK	ELLVDC(UniMod:4)YKPTEAFISGLLDK	3	ELLVDC(UniMod:4)YKPTEAFISGLLDK3	10465.1	12302.2	7439.13
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	ELLVHLPPVNR	ELLVHLPPVNR	3	ELLVHLPPVNR3	25991.8	14927.5	9979.98
F7FF81	F7FF81	F7FF81_RAT	Pfdn5	Prefoldin subunit 5	1	ELLVPLTSSMYVPGK	ELLVPLTSSMYVPGK	2	ELLVPLTSSMYVPGK2	193811	185064	216967
F7FF81	F7FF81	F7FF81_RAT	Pfdn5	Prefoldin subunit 5	1	ELLVPLTSSMYVPGK	ELLVPLTSSMYVPGK	3	ELLVPLTSSMYVPGK3	12629	10325.3	10410.8
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	ELLVPQAEVTAR	ELLVPQAEVTAR	2	ELLVPQAEVTAR2	38025.8	27690.4	26616
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	ELLVSALQELEANNSTSNK	ELLVSALQELEANNSTSNK	3	ELLVSALQELEANNSTSNK3		5328.28	4340.49
Q07969	Q07969	CD36_RAT	Cd36	Platelet glycoprotein 4	1	ELLWGYK	ELLWGYK	2	ELLWGYK2	23728.9	12428	14866.8
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	ELLYFLDSCEPEFK	ELLYFLDSC(UniMod:4)EPEFK	2	ELLYFLDSC(UniMod:4)EPEFK2	70064.5	61123	62590.8
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	ELLYFLDSCEPEFK	ELLYFLDSC(UniMod:4)EPEFK	3	ELLYFLDSC(UniMod:4)EPEFK3	9838.55	8012.28	5995.22
Q6AYA0	Q6AYA0	RIPL2_RAT	Rilpl2	RILP-like protein 2	1	ELMALGSDPR	ELMALGSDPR	2	ELMALGSDPR2	4160.13	5145.31	4665.4
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	ELMDEEDVLQECK	ELMDEEDVLQEC(UniMod:4)K	2	ELMDEEDVLQEC(UniMod:4)K2	69443	80211.6	78735.9
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	ELMEDSRAEGEKEK	ELMEDSRAEGEKEK	3	ELMEDSRAEGEKEK3	38504	55163.8	39656.1
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	ELMEDSRAEGEKEK	ELMEDSRAEGEKEK	4	ELMEDSRAEGEKEK4	13099.7	18958.8	12023.6
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ELMEEKK	ELMEEKK	1	ELMEEKK1		395.921	3185.58
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ELMEEKK	ELMEEKK	2	ELMEEKK2	54072.9	48046.9	38866.7
B5DEN9	B5DEN9	VPS28_RAT	Vps28	Vacuolar protein sorting-associated protein 28 homolog	1	ELMETMHR	ELMETMHR	2	ELMETMHR2	4921.88	7307.88	4293.15
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	ELMGEEILGASLSAPLTCYK	ELMGEEILGASLSAPLTC(UniMod:4)YK	3	ELMGEEILGASLSAPLTC(UniMod:4)YK3	12014.7	10183	10213.2
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ELMMGVLGPLSIDPNMLNAQK	ELMMGVLGPLSIDPNMLNAQK	3	ELMMGVLGPLSIDPNMLNAQK3	11229.3	9384.93	13883.6
A0A8I5ZN24	A0A8I5ZN24	A0A8I5ZN24_RAT	Dhrs7	Dehydrogenase/reductase 7	1	ELMNLNYLGTVSLTK	ELMNLNYLGTVSLTK	2	ELMNLNYLGTVSLTK2	7236.48	6711.65	10444.4
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	ELMPDVGR	ELMPDVGR	2	ELMPDVGR2	29473	24739.7	11869.9
B5DFI3	B5DFI3	B5DFI3_RAT	Ap1s1	AP complex subunit sigma	1	ELMQVVLAR	ELMQVVLAR	2	ELMQVVLAR2	138565	161272	130318
M0RAK0	M0RAK0	M0RAK0_RAT	Proser2	Proline and serine rich 2	1	ELMSPSPPAEHPK	ELMSPSPPAEHPK	3	ELMSPSPPAEHPK3	35513.2	27187	19421.3
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	ELMSQLEEAGQLYHDSK	ELMSQLEEAGQLYHDSK	3	ELMSQLEEAGQLYHDSK3	9352.87	10476.2	20332.7
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	ELMVPGTR	ELMVPGTR	2	ELMVPGTR2	546864	704977	460046
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	ELMVTSR	ELMVTSR	2	ELMVTSR2	60491.2	69350.7	66496.9
Q5HZY2	Q5HZY2	SAR1B_RAT	Sar1b	GTP-binding protein SAR1b	1	ELNARPLEVFMCSVLK	ELNARPLEVFMC(UniMod:4)SVLK	3	ELNARPLEVFMC(UniMod:4)SVLK3	17727.7	22052.4	24273.2
A0A8I6ASK6	A0A8I6ASK6	A0A8I6ASK6_RAT	Fcrl1	Fc receptor-like 1	1	ELNCGAAK	ELNC(UniMod:4)GAAK	1	ELNC(UniMod:4)GAAK1			3500.99
A0A8I6ASK6	A0A8I6ASK6	A0A8I6ASK6_RAT	Fcrl1	Fc receptor-like 1	1	ELNCGAAK	ELNC(UniMod:4)GAAK	2	ELNC(UniMod:4)GAAK2	265912		582432
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	ELNDFISYLQR	ELNDFISYLQR	2	ELNDFISYLQR2	724929	682145	667070
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	ELNDFISYLQR	ELNDFISYLQR	3	ELNDFISYLQR3	16868.1	10943.3	17286.7
P62839	P62839	UB2D2_RAT	Ube2d2	Ubiquitin-conjugating enzyme E2 D2	1	ELNDLAR	ELNDLAR	2	ELNDLAR2	27754.9	23263.7	23620.6
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	ELNDMASTPK	ELNDMASTPK	2	ELNDMASTPK2	56438.1	63094.4	63697.6
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	ELNDMQAQLVEECTHR	ELNDMQAQLVEEC(UniMod:4)THR	3	ELNDMQAQLVEEC(UniMod:4)THR3	12737.1	9865.93	7971.11
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	ELNELGSK	ELNELGSK	2	ELNELGSK2	71883.1	74981.6	76412.7
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	ELNEMQAQIAEESQIR	ELNEMQAQIAEESQIR	2	ELNEMQAQIAEESQIR2	13355.9	12322.2	10291
D3ZRD3	D3ZRD3	D3ZRD3_RAT	Pde6d	Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta	1	ELNFSSAEQMEK	ELNFSSAEQMEK	2	ELNFSSAEQMEK2	9518.15	3222.88	10546.1
D4A7L4	D4A7L4	D4A7L4_RAT	Ndufb11	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial	1	ELNGLPIMESNYFDPSK	ELNGLPIMESNYFDPSK	2	ELNGLPIMESNYFDPSK2	44440.2	34135.6	48233.1
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	ELNGTYAISGGR	ELNGTYAISGGR	2	ELNGTYAISGGR2	10202.7	18370.5	20325.5
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	ELNHCLSLR	ELNHC(UniMod:4)LSLR	3	ELNHC(UniMod:4)LSLR3	52762.3	58752.1	55555.2
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	ELNHYLEAEK	ELNHYLEAEK	3	ELNHYLEAEK3	8529.34	13242.3	14520.5
P62083	P62083;A0A8I6GEL5;A0A8I6AEL1	RS7_RAT	Rps7	Small ribosomal subunit protein eS7	0	ELNITAAK	ELNITAAK	2	ELNITAAK2	22756.8	13820.4	18497.4
P08494	P08494	MGP_RAT	Mgp	Matrix Gla protein	1	ELNKPAQEINR	ELNKPAQEINR	3	ELNKPAQEINR3	7254.07	10137.6	9313.04
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	ELNLEKDK	ELNLEKDK	2	ELNLEKDK2	107115	114893	88866.1
D3ZXY4	D3ZXY4	D3ZXY4_RAT	Aldh8a1	Aldehyde dehydrogenase 8 family, member A1	1	ELNLPFGGMK	ELNLPFGGMK	2	ELNLPFGGMK2	4787.73		7279.22
B2GV39	B2GV39	B2GV39_RAT	Mgat4b	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B	1	ELNLVLEEIKR	ELNLVLEEIKR	3	ELNLVLEEIKR3	16521.1	123023	29281.7
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	ELNMEPADLMNR	ELNMEPADLMNR	2	ELNMEPADLMNR2	1.14507e+06	1.08961e+06	1.10616e+06
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	ELNMEPADLMNR	ELNMEPADLMNR	3	ELNMEPADLMNR3	3641.82	7833.58	11520.7
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	ELNMGQR	ELNMGQR	2	ELNMGQR2	38897.4	27101.5	33366.5
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	ELNNVCEPVVTQPK	ELNNVC(UniMod:4)EPVVTQPK	2	ELNNVC(UniMod:4)EPVVTQPK2	10262.2	8185.07	3822.77
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ELNPEEGK	ELNPEEGK	2	ELNPEEGK2	41470.6	54478.3	42342
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	ELNSFLESQK	ELNSFLESQK	2	ELNSFLESQK2	11998.8	3776.63	
Q6AY30	Q6AY30	SCPDL_RAT	Sccpdh	Saccharopine dehydrogenase-like oxidoreductase	1	ELNSYAIPFLGSDMSVVK	ELNSYAIPFLGSDMSVVK	3	ELNSYAIPFLGSDMSVVK3	25147.3	5702.15	15072.5
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	ELNSYEDFLDAR	ELNSYEDFLDAR	2	ELNSYEDFLDAR2	14070.6	10050.8	19453.2
A0A0G2JWD0	A0A0G2JWD0	A0A0G2JWD0_RAT	Prom1	Prominin 1	1	ELNTVNDVDR	ELNTVNDVDR	2	ELNTVNDVDR2	3925.98	4450.17	1574.34
A0A0G2JWD0	A0A0G2JWD0	A0A0G2JWD0_RAT	Prom1	Prominin 1	1	ELNTVNDVDRTDLESLVK	ELNTVNDVDRTDLESLVK	3	ELNTVNDVDRTDLESLVK3	35991.1	27512	27793.7
Q9WVB1	Q9WVB1	RAB6A_RAT	Rab6a	Ras-related protein Rab-6A	1	ELNVMFIETSAK	ELNVMFIETSAK	2	ELNVMFIETSAK2	679829	557980	597884
Q9WVB1	Q9WVB1	RAB6A_RAT	Rab6a	Ras-related protein Rab-6A	1	ELNVMFIETSAK	ELNVMFIETSAK	3	ELNVMFIETSAK3	4059.72	3765.21	
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	ELNWSELR	ELNWSELR	2	ELNWSELR2	138645	120752	136840
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	ELNWSELRK	ELNWSELRK	2	ELNWSELRK2	5109.93	10085.8	8245.52
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	ELNWSELRK	ELNWSELRK	3	ELNWSELRK3	57481.3	67954	70938.4
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	ELNYKHK	ELNYKHK	2	ELNYKHK2			16832.7
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	ELPAWVSFPDVEK	ELPAWVSFPDVEK	2	ELPAWVSFPDVEK2	619218	613310	695295
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	ELPAWVSFPDVEK	ELPAWVSFPDVEK	3	ELPAWVSFPDVEK3	8392.78	4323.95	12555.6
Q5I0D1	Q5I0D1	GLOD4_RAT	Glod4	Glyoxalase domain-containing protein 4	1	ELPDLEDLMK	ELPDLEDLMK	2	ELPDLEDLMK2	29120.6	36256.4	34622.2
F1M3G7	F1M3G7	AKP13_RAT	Akap13	A-kinase anchor protein 13	1	ELPDSSSTDAGAPEK	ELPDSSSTDAGAPEK	2	ELPDSSSTDAGAPEK2	8683.45		
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	ELPEHTLK	ELPEHTLK	1	ELPEHTLK1	10976.5		2765.7
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	ELPEHTLK	ELPEHTLK	2	ELPEHTLK2	1.93087e+06	1.21017e+06	1.10611e+06
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	ELPELLQR	ELPELLQR	2	ELPELLQR2	184015	172570	181271
G3V6R4	G3V6R4	G3V6R4_RAT	Lrrc1	Leucine rich repeat containing 1	1	ELPEQFFQLVK	ELPEQFFQLVK	2	ELPEQFFQLVK2	22885.5	15331.6	25090.1
Q8R431	Q8R431	MGLL_RAT	Mgll	Monoglyceride lipase	1	ELPEVTNSVLHEINTWVSHR	ELPEVTNSVLHEINTWVSHR	3	ELPEVTNSVLHEINTWVSHR3	29575.6	19486.9	14764.7
Q8R431	Q8R431	MGLL_RAT	Mgll	Monoglyceride lipase	1	ELPEVTNSVLHEINTWVSHR	ELPEVTNSVLHEINTWVSHR	4	ELPEVTNSVLHEINTWVSHR4	50621	34385.1	35173.9
P18395	P18395	CSDE1_RAT	Csde1	Cold shock domain-containing protein E1	1	ELPFGDKDTK	ELPFGDKDTK	3	ELPFGDKDTK3	3750.22	13094.5	
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	ELPGELLGYR	ELPGELLGYR	2	ELPGELLGYR2	31015.4	19743.8	16161.3
P54313	O35353;P54313	GBB2_RAT	Gnb2	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2	0	ELPGHTGYLSCCR	ELPGHTGYLSC(UniMod:4)C(UniMod:4)R	2	ELPGHTGYLSC(UniMod:4)C(UniMod:4)R2	283973	236877	206696
P54313	O35353;P54313	GBB2_RAT	Gnb2	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2	0	ELPGHTGYLSCCR	ELPGHTGYLSC(UniMod:4)C(UniMod:4)R	3	ELPGHTGYLSC(UniMod:4)C(UniMod:4)R3	932181	1.01727e+06	1.02385e+06
Q6QMY6	Q6QMY6	TSK_RAT	Tsku	Tsukushi	1	ELPGLQVLDLSGNPK	ELPGLQVLDLSGNPK	2	ELPGLQVLDLSGNPK2	271599	208437	209953
Q6QMY6	Q6QMY6	TSK_RAT	Tsku	Tsukushi	1	ELPGLQVLDLSGNPK	ELPGLQVLDLSGNPK	3	ELPGLQVLDLSGNPK3	18690.6	14724	23335
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	ELPIDVTMVCCR	ELPIDVTMVC(UniMod:4)C(UniMod:4)R	2	ELPIDVTMVC(UniMod:4)C(UniMod:4)R2	27371.8	21099.5	25339.8
P10683	P10683	GALA_RAT	Gal	Galanin peptides	1	ELPLEVEEGR	ELPLEVEEGR	2	ELPLEVEEGR2	64218.7	54771.8	59482
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	ELPLYAR	ELPLYAR	2	ELPLYAR2	92186.5	93784.9	60886.1
Q91XJ1	Q91XJ1	BECN1_RAT	Becn1	Beclin-1	1	ELPLYCSGGLR	ELPLYC(UniMod:4)SGGLR	2	ELPLYC(UniMod:4)SGGLR2	29643.1	29582.2	30084.9
Q9Z1P2	Q9QXQ0;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	ELPPDQAEYCIAR	ELPPDQAEYC(UniMod:4)IAR	2	ELPPDQAEYC(UniMod:4)IAR2	4.64882e+06	5.80249e+06	5.85224e+06
Q9Z1P2	Q9QXQ0;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	ELPPDQAEYCIAR	ELPPDQAEYC(UniMod:4)IAR	3	ELPPDQAEYC(UniMod:4)IAR3	76373.8	84690.8	104278
Q498T9	Q498T9	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	1	ELPPWMYGLR	ELPPWMYGLR	2	ELPPWMYGLR2	55592.1	58348.5	49007.8
A0A8I5ZYB9	A0A8I5ZYB9	A0A8I5ZYB9_RAT	Lrrc32	Leucine rich repeat containing 32	1	ELPPYTFAGLASLQR	ELPPYTFAGLASLQR	2	ELPPYTFAGLASLQR2	351753	304809	340448
A0A8I5ZYB9	A0A8I5ZYB9	A0A8I5ZYB9_RAT	Lrrc32	Leucine rich repeat containing 32	1	ELPPYTFAGLASLQR	ELPPYTFAGLASLQR	3	ELPPYTFAGLASLQR3	41772.9	36806	44372.3
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	ELPQLVASVIESESEILHHEK	ELPQLVASVIESESEILHHEK	4	ELPQLVASVIESESEILHHEK4	20905.5	30996.5	23636
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	ELPQPLLSTEYLK	ELPQPLLSTEYLK	2	ELPQPLLSTEYLK2	125257	125165	122646
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	ELPQPLLSTEYLK	ELPQPLLSTEYLK	3	ELPQPLLSTEYLK3	5704.95	599.298	5391.43
D3ZXB1	D3ZXB1	D3ZXB1_RAT	Map4k2	Mitogen-activated protein kinase kinase kinase kinase 2	1	ELPQVCVGAEGPEGPGCR	ELPQVC(UniMod:4)VGAEGPEGPGC(UniMod:4)R	3	ELPQVC(UniMod:4)VGAEGPEGPGC(UniMod:4)R3		3164.05	2224.3
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	ELPSAVSR	ELPSAVSR	2	ELPSAVSR2	268844	248452	274746
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	ELPSDTYISR	ELPSDTYISR	2	ELPSDTYISR2	52191.5	61368.1	50039.3
P05942	P05942	S10A4_RAT	S100a4	Protein S100-A4	1	ELPSFLGR	ELPSFLGR	2	ELPSFLGR2	3.65495e+06	3.76957e+06	3.83784e+06
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	ELPSGVEELLNLGHDPLADR	ELPSGVEELLNLGHDPLADR	3	ELPSGVEELLNLGHDPLADR3	151101	176714	153971
Q5FVI3	Q5FVI3	LRC57_RAT	Lrrc57	Leucine-rich repeat-containing protein 57	1	ELPSSFGQLSALK	ELPSSFGQLSALK	2	ELPSSFGQLSALK2	15721.4	6297.78	6705.06
D3ZAF6	D3ZAF6	ATPK_RAT	Atp5mf	ATP synthase subunit f, mitochondrial	1	ELPSWILMR	ELPSWILMR	2	ELPSWILMR2	287257	398688	387285
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	ELPTAFDYVEFTR	ELPTAFDYVEFTR	2	ELPTAFDYVEFTR2	210794	218162	214453
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	ELPTAFDYVEFTR	ELPTAFDYVEFTR	3	ELPTAFDYVEFTR3	17330	7056.39	12326.6
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	ELPTLKDNDFINEGQK	ELPTLKDNDFINEGQK	2	ELPTLKDNDFINEGQK2	2083.58	2151.25	
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	ELPTLKDNDFINEGQK	ELPTLKDNDFINEGQK	3	ELPTLKDNDFINEGQK3	53931	69907.1	68549.2
O08561	O08561	PI4KB_RAT	Pi4kb	Phosphatidylinositol 4-kinase beta	1	ELPTLSPAPDTGLSPSK	ELPTLSPAPDTGLSPSK	2	ELPTLSPAPDTGLSPSK2	6725.77	7216.33	4846.04
D4AEP0	D4AEP0	D4AEP0_RAT	Adss	Adenylosuccinate synthetase isozyme 2	1	ELPVNAQNYVR	ELPVNAQNYVR	2	ELPVNAQNYVR2	38320.4	33824.4	39271.7
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	ELQAACR	ELQAAC(UniMod:4)R	2	ELQAAC(UniMod:4)R2	48073.5	60925.7	49355
B0K019	B0K019	BAG1_RAT	Bag1	BAG family molecular chaperone regulator 1	1	ELQAEALCR	ELQAEALC(UniMod:4)R	2	ELQAEALC(UniMod:4)R2	24256.1	17269.5	20987.9
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	ELQAEQEDR	ELQAEQEDR	2	ELQAEQEDR2		11832.3	
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	ELQAHGADELLK	ELQAHGADELLK	2	ELQAHGADELLK2	8731.63	10186.5	8932.18
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	ELQAHGADELLK	ELQAHGADELLK	3	ELQAHGADELLK3	415307	379439	361308
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	ELQAHGADELLKR	ELQAHGADELLKR	3	ELQAHGADELLKR3	35732.7	28789.8	33665.6
P62483	P62483	KCAB2_RAT	Kcnab2	Voltage-gated potassium channel subunit beta-2	1	ELQAIAER	ELQAIAER	2	ELQAIAER2	28723.5	28192	26777.4
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	ELQALAAAVVPSAQTLK	ELQALAAAVVPSAQTLK	2	ELQALAAAVVPSAQTLK2	197049	129449	130859
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	ELQALAAAVVPSAQTLK	ELQALAAAVVPSAQTLK	3	ELQALAAAVVPSAQTLK3	211199	135972	159394
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	ELQALLHQAIEEK	ELQALLHQAIEEK	3	ELQALLHQAIEEK3	3930.83	7271.76	8118.86
D3Z7Z5	D3Z7Z5	D3Z7Z5_RAT	Ranbp10	RAN binding protein 10	1	ELQALSEQLGR	ELQALSEQLGR	2	ELQALSEQLGR2	4213.24	7562.32	5081.45
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	ELQAVYTLTLK	ELQAVYTLTLK	2	ELQAVYTLTLK2	30057	27796	31152.9
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	ELQCPVGIPCQQTAR	ELQC(UniMod:4)PVGIPC(UniMod:4)QQTAR	2	ELQC(UniMod:4)PVGIPC(UniMod:4)QQTAR2	77679.8	80406.4	75524
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	ELQCPVGIPCQQTAR	ELQC(UniMod:4)PVGIPC(UniMod:4)QQTAR	3	ELQC(UniMod:4)PVGIPC(UniMod:4)QQTAR3	21320	21603.6	28002.7
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	ELQDLALQGAK	ELQDLALQGAK	2	ELQDLALQGAK2	3.45386e+06	4.19452e+06	4.00506e+06
Q62868	Q62868;Q63644	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	0	ELQDQLEAEQYFSTLYK	ELQDQLEAEQYFSTLYK	3	ELQDQLEAEQYFSTLYK3	11625	12200.3	9674.02
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	ELQDSTQMNEK	ELQDSTQMNEK	2	ELQDSTQMNEK2	8692.97	7434.9	6547.51
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	ELQEAAR	ELQEAAR	2	ELQEAAR2	394889	513275	680370
P40241	P40241	CD9_RAT	Cd9	CD9 antigen	1	ELQEFYK	ELQEFYK	1	ELQEFYK1	35061.5	38946.2	32716.6
P40241	P40241	CD9_RAT	Cd9	CD9 antigen	1	ELQEFYK	ELQEFYK	2	ELQEFYK2	2.07322e+06	2.19245e+06	2.52352e+06
P40241	P40241	CD9_RAT	Cd9	CD9 antigen	1	ELQEFYKDTYQK	ELQEFYKDTYQK	2	ELQEFYKDTYQK2	4447.59	9310.45	7992.57
P40241	P40241	CD9_RAT	Cd9	CD9 antigen	1	ELQEFYKDTYQK	ELQEFYKDTYQK	3	ELQEFYKDTYQK3	67165.1	84160.8	95806.1
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	ELQEGTYIMSAGPTFETVAESCLLR	ELQEGTYIMSAGPTFETVAESC(UniMod:4)LLR	3	ELQEGTYIMSAGPTFETVAESC(UniMod:4)LLR3	19554.8	29566.1	29999.2
G3V6A8	G3V6A8;B5DFE0	G3V6A8_RAT	Golgb1	Golgin B1	0	ELQELLK	ELQELLK	2	ELQELLK2	25723.1	26294.5	32529.9
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	ELQELSLSIK	ELQELSLSIK	2	ELQELSLSIK2	23829.4	18905.9	11742.8
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	ELQELVQYPVEHPDK	ELQELVQYPVEHPDK	2	ELQELVQYPVEHPDK2	31723.8	18309	21084.1
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	ELQELVQYPVEHPDK	ELQELVQYPVEHPDK	3	ELQELVQYPVEHPDK3	414572	341937	436968
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	ELQELVQYPVEHPDK	ELQELVQYPVEHPDK	4	ELQELVQYPVEHPDK4	5026.62	5195.8	3119.38
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	ELQELVQYPVEHPDKFLK	ELQELVQYPVEHPDKFLK	3	ELQELVQYPVEHPDKFLK3	20493.1	20890.3	16092.5
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	ELQELVQYPVEHPDKFLK	ELQELVQYPVEHPDKFLK	4	ELQELVQYPVEHPDKFLK4	68102.3	71190.3	97136.8
Q5M860	Q5M860	Q5M860_RAT	Arhgdib	Rho GDP dissociation inhibitor beta	1	ELQEMDKDDESLTK	ELQEMDKDDESLTK	2	ELQEMDKDDESLTK2	1267.77	2859.9	
Q5M860	Q5M860	Q5M860_RAT	Arhgdib	Rho GDP dissociation inhibitor beta	1	ELQEMDKDDESLTK	ELQEMDKDDESLTK	3	ELQEMDKDDESLTK3	54700.7	46830.7	48732.2
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	ELQEQEWK	ELQEQEWK	2	ELQEQEWK2		5775.31	7761.3
Q6P7P5	Q6P7P5	5MP2_RAT	Bzw1	eIF5-mimic protein 2	1	ELQEQMSR	ELQEQMSR	2	ELQEQMSR2	210999	230080	184994
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	ELQETLDDWNK	ELQETLDDWNK	2	ELQETLDDWNK2	4928.49	3771.51	7146.23
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	ELQETLDDWNKGPPLKPVLFGK	ELQETLDDWNKGPPLKPVLFGK	3	ELQETLDDWNKGPPLKPVLFGK3	4110.1	5520.45	4727.73
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	ELQETLDDWNKGPPLKPVLFGK	ELQETLDDWNKGPPLKPVLFGK	4	ELQETLDDWNKGPPLKPVLFGK4	6276.21	7334.64	7981.99
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	ELQETNAALQDVR	ELQETNAALQDVR	2	ELQETNAALQDVR2	336930	341930	305452
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	ELQETNAALQDVR	ELQETNAALQDVR	3	ELQETNAALQDVR3	10759.9	11809.5	12938.5
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	ELQFSVEDINR	ELQFSVEDINR	2	ELQFSVEDINR2	7525	8758.49	11877
A0A0G2JT44	A0A0G2JT44	A0A0G2JT44_RAT	Tmc6	Transmembrane channel-like protein	1	ELQGLSVAQR	ELQGLSVAQR	2	ELQGLSVAQR2	108271	122462	121303
Q63186	Q63186	EI2BD_RAT	Eif2b4	Translation initiation factor eIF-2B subunit delta	1	ELQGTGSQLGGTTGEK	ELQGTGSQLGGTTGEK	2	ELQGTGSQLGGTTGEK2	13958.8	8722.06	22198.3
A0A8J8YHW4	A0A8J8YHW4	A0A8J8YHW4_RAT	Clk2	Secretory carrier-associated membrane protein	1	ELQHVALGGAGTR	ELQHVALGGAGTR	2	ELQHVALGGAGTR2	13448	10544.7	10621.1
A0A8J8YHW4	A0A8J8YHW4	A0A8J8YHW4_RAT	Clk2	Secretory carrier-associated membrane protein	1	ELQHVALGGAGTR	ELQHVALGGAGTR	3	ELQHVALGGAGTR3	164106	160028	169696
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	ELQHYVTMELR	ELQHYVTMELR	3	ELQHYVTMELR3	21915	24648.4	22647.1
F1MA46	F1MA46	F1MA46_RAT	Pcdh12	Protocadherin 12	1	ELQIQVSDVNDNAPVFEK	ELQIQVSDVNDNAPVFEK	3	ELQIQVSDVNDNAPVFEK3	9972.62	12053.6	9146.5
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	ELQLESLLGAFESLGK	ELQLESLLGAFESLGK	2	ELQLESLLGAFESLGK2	3237.71		
Q8K3V3	Q8K3V3	AGRG1_RAT	Adgrg1	Adhesion G-protein coupled receptor G1	1	ELQLLSK	ELQLLSK	2	ELQLLSK2	13716.9		10480.4
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	ELQLPSMSMLTSK	ELQLPSMSMLTSK	2	ELQLPSMSMLTSK2	75850.8	88319	74369
C0HJX2;C0HJX3	A0A0G2KBC9;C0HJX3;C0HJX2	LRB3A_RAT;LRB3B_RAT	Lilrb3a;Lilrb3b	Leukocyte immunoglobulin-like receptor subfamily B member 3A	0	ELQLSTGAAEPVTR	ELQLSTGAAEPVTR	2	ELQLSTGAAEPVTR2	11595.1	9900.53	13234.7
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	ELQNAPDAIPESGVEPPPLDTAWVEATRK	ELQNAPDAIPESGVEPPPLDTAWVEATRK	4	ELQNAPDAIPESGVEPPPLDTAWVEATRK4	2250.61	10785.8	10796.2
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	ELQNFLR	ELQNFLR	2	ELQNFLR2	16758.4	13642.9	13174.3
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	ELQNLIGAVNQLNVLTK	ELQNLIGAVNQLNVLTK	2	ELQNLIGAVNQLNVLTK2	195675	155995	156737
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	ELQNLIGAVNQLNVLTK	ELQNLIGAVNQLNVLTK	3	ELQNLIGAVNQLNVLTK3	381455	406035	420079
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	ELQNMAVR	ELQNMAVR	2	ELQNMAVR2	244303	250443	256352
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	ELQNMECVTAVR	ELQNMEC(UniMod:4)VTAVR	2	ELQNMEC(UniMod:4)VTAVR2	4312.7	2499.92	7287.5
A0A8I6GL39	A0A8I6GL39	A0A8I6GL39_RAT	Scamp2	Secretory carrier-associated membrane protein	1	ELQNTAANLHVR	ELQNTAANLHVR	2	ELQNTAANLHVR2	40100.9	33429.5	20300.5
A0A8I6GL39	A0A8I6GL39	A0A8I6GL39_RAT	Scamp2	Secretory carrier-associated membrane protein	1	ELQNTAANLHVR	ELQNTAANLHVR	3	ELQNTAANLHVR3	299594	346439	295351
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	ELQNVQVNQK	ELQNVQVNQK	2	ELQNVQVNQK2	26569.3	32736.6	31760.4
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	ELQPQQQPR	ELQPQQQPR	2	ELQPQQQPR2	32466.7	40334.6	34105.4
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	ELQPSLSPASLHSQGFER	ELQPSLSPASLHSQGFER	3	ELQPSLSPASLHSQGFER3	15910.6	8868.89	11352.4
D3ZCK4	D3ZCK4	D3ZCK4_RAT	Def6	DEF6 guanine nucleotide exchange factor	1	ELQQALEGQLR	ELQQALEGQLR	2	ELQQALEGQLR2	10771.1	10912.5	17479.6
Q4V7F5	Q4V7F5	PIHD1_RAT	Pih1d1	PIH1 domain-containing protein 1	1	ELQQAQTARPESTQIQPK	ELQQAQTARPESTQIQPK	3	ELQQAQTARPESTQIQPK3	8781.46	3990.21	12193.1
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	ELQQAVLQMEQR	ELQQAVLQMEQR	2	ELQQAVLQMEQR2	14520.2	17047.6	10562.6
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	ELQQGKPYHWR	ELQQGKPYHWR	3	ELQQGKPYHWR3	9246.59	10751.8	7114.64
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	ELQQSLDSTLAQLAAFTK	ELQQSLDSTLAQLAAFTK	3	ELQQSLDSTLAQLAAFTK3	6439.61	6772.97	2190.79
D3ZV82	D3ZV82	D3ZV82_RAT	Gbp7	Similar to guanylate binding protein family, member 6	1	ELQQVMESQER	ELQQVMESQER	2	ELQQVMESQER2	3322.55	5776.66	
O08697	O08697	ARL2_RAT	Arl2	ADP-ribosylation factor-like protein 2	1	ELQSLLVEER	ELQSLLVEER	2	ELQSLLVEER2	25500	19903	24047.4
Q6AY23	Q6AY23	P5CR2_RAT	Pycr2	Pyrroline-5-carboxylate reductase 2	1	ELQSMADQEK	ELQSMADQEK	2	ELQSMADQEK2	22747.5	23115.3	16028.6
D3ZIJ5	D3ZIJ5	D3ZIJ5_RAT	Dpm3	Dolichol-phosphate mannosyltransferase subunit 3	1	ELQSQILEAR	ELQSQILEAR	2	ELQSQILEAR2	15855.1	21914	14258.2
Q4FZY0	Q4FZY0	EFHD2_RAT	Efhd2	EF-hand domain-containing protein D2	1	ELQSTFK	ELQSTFK	2	ELQSTFK2	84469.4	74439.3	77580.2
Q99MM4	Q99MM4	TRAD1_RAT	Trafd1	TRAF-type zinc finger domain-containing protein 1	1	ELQTHPAVCGR	ELQTHPAVC(UniMod:4)GR	3	ELQTHPAVC(UniMod:4)GR3	8875.09	5692.01	
A0A8I6G3Q5	A0A8I6G3Q5	A0A8I6G3Q5_RAT	Uprt	Uracil phosphoribosyltransferase homolog	1	ELQTIIR	ELQTIIR	2	ELQTIIR2	31928.5	38221.7	32027.4
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	ELQTILNR	ELQTILNR	2	ELQTILNR2	376762	369859	364959
Q2PQA9	P56536;Q2PQA9;Q6QLM7	KINH_RAT	Kif5b	Kinesin-1 heavy chain	0	ELQTLHNLR	ELQTLHNLR	2	ELQTLHNLR2	12852	10634.3	8910.02
Q2PQA9	P56536;Q2PQA9;Q6QLM7	KINH_RAT	Kif5b	Kinesin-1 heavy chain	0	ELQTLHNLRK	ELQTLHNLRK	3	ELQTLHNLRK3	30392.8	46950.7	33727.9
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	ELQTMLKPGGQVDGDEALEFYAK	ELQTMLKPGGQVDGDEALEFYAK	3	ELQTMLKPGGQVDGDEALEFYAK3	6092.4	11537.9	
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	ELQTQYDALK	ELQTQYDALK	2	ELQTQYDALK2	3730.38	4207.52	5387.11
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	ELQTQYDALKK	ELQTQYDALKK	3	ELQTQYDALKK3	7502.54	3868.43	2893.4
P47861	P47861	SYT5_RAT	Syt5	Synaptotagmin-5	1	ELQVAPK	ELQVAPK	2	ELQVAPK2	36962.1	32032.4	52259.3
Q5U2R3	Q5U2R3	FRMD8_RAT	Frmd8	FERM domain-containing protein 8	1	ELQVHDEEVLR	ELQVHDEEVLR	3	ELQVHDEEVLR3	6994.76	11089.8	5896.79
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	ELQVYTSPK	ELQVYTSPK	2	ELQVYTSPK2	516943	547783	539041
O35509	O35509;P62494	RB11B_RAT	Rab11b	Ras-related protein Rab-11B	0	ELRDHADSNIVIMLVGNK	ELRDHADSNIVIMLVGNK	3	ELRDHADSNIVIMLVGNK3	86986	88822.5	91794.6
O35509	O35509;P62494	RB11B_RAT	Rab11b	Ras-related protein Rab-11B	0	ELRDHADSNIVIMLVGNK	ELRDHADSNIVIMLVGNK	4	ELRDHADSNIVIMLVGNK4	123745	139786	164440
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	ELRDQNAEALDPR	ELRDQNAEALDPR	3	ELRDQNAEALDPR3	9918.06	15604.2	8403.46
Q62720	Q62720	ZNT1_RAT	Slc30a1	Proton-coupled zinc antiporter SLC30A1	1	ELRDVEGVEEVHELHVWQLAGSR	ELRDVEGVEEVHELHVWQLAGSR	4	ELRDVEGVEEVHELHVWQLAGSR4	4387.99	17939.7	20547
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	ELREPEGVK	ELREPEGVK	2	ELREPEGVK2	6411.08		
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	ELRETVGDLEAMNEMNDELQENAR	ELRETVGDLEAMNEMNDELQENAR	3	ELRETVGDLEAMNEMNDELQENAR3	6306.64	7736.32	6831.04
P23593	P23593	APOD_RAT	Apod	Apolipoprotein D	1	ELRPDGTLNQVEGEAK	ELRPDGTLNQVEGEAK	2	ELRPDGTLNQVEGEAK2	19075.8	10613.8	9723.77
P23593	P23593	APOD_RAT	Apod	Apolipoprotein D	1	ELRPDGTLNQVEGEAK	ELRPDGTLNQVEGEAK	3	ELRPDGTLNQVEGEAK3	361615	408928	436823
P0DN35	P0DN35	NDUB1_RAT	Ndufb1	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1	1	ELRPNEEVTWK	ELRPNEEVTWK	3	ELRPNEEVTWK3	40036.3	34692.8	44147.2
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	ELSAEELSQR	ELSAEELSQR	2	ELSAEELSQR2		1593.73	4317.89
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	ELSAQPEVHR	ELSAQPEVHR	2	ELSAQPEVHR2	147080	105069	93760.8
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	ELSAQPEVHR	ELSAQPEVHR	3	ELSAQPEVHR3	647911	607407	661290
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	ELSAVQK	ELSAVQK	2	ELSAVQK2	271847	298265	299794
F1M9D6	F1M9D6	F1M9D6_RAT	Stat1	Signal transducer and activator of transcription	1	ELSAVTFPDIIR	ELSAVTFPDIIR	2	ELSAVTFPDIIR2	6032.15	3217.55	7154.84
Q2V057	Q2V057	HYPDH_RAT	Prodh2	Hydroxyproline dehydrogenase	1	ELSAWIQRPR	ELSAWIQRPR	3	ELSAWIQRPR3	14736.2	12473	7985.57
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	ELSCQALER	ELSC(UniMod:4)QALER	2	ELSC(UniMod:4)QALER2	8184.85	5342.95	11151.4
Q66HA4	Q66HA4	TAXB1_RAT	Tax1bp1	Tax1-binding protein 1 homolog	1	ELSDAVNVR	ELSDAVNVR	2	ELSDAVNVR2	2906.14	8691.33	6101.77
Q9WTT7	Q9WTT7	5MP1_RAT	Bzw2	eIF5-mimic protein 1	1	ELSDFLR	ELSDFLR	2	ELSDFLR2	59167.8	66848.2	50894.1
B0K019	B0K019	BAG1_RAT	Bag1	BAG family molecular chaperone regulator 1	1	ELSDIQQGFLAK	ELSDIQQGFLAK	2	ELSDIQQGFLAK2	6570.07	4280.43	1829.04
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	ELSDLESAR	ELSDLESAR	2	ELSDLESAR2	39161.6	47561.4	52736.5
P82450	P82450	SIAE_RAT	Siae	Sialate O-acetylesterase	1	ELSDTAAYQSVR	ELSDTAAYQSVR	2	ELSDTAAYQSVR2	5789.48	12798	7915.68
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	ELSEALTR	ELSEALTR	2	ELSEALTR2	38151.1	34494.1	47528.9
Q9Z136	Q9Z136	TSC1_RAT	Tsc1	Hamartin	1	ELSEITTAEADPVAPR	ELSEITTAEADPVAPR	2	ELSEITTAEADPVAPR2	4248.66	1518.69	4727.83
D4AB17	D4AB17	D4AB17_RAT	Pfas	phosphoribosylformylglycinamidine synthase	1	ELSEPAGAVIYTSR	ELSEPAGAVIYTSR	2	ELSEPAGAVIYTSR2	6557.66		6721.67
A0A8I6A5H5	A0A8I6A5H5	A0A8I6A5H5_RAT	Rela	RELA proto-oncogene, NF-kB subunit	1	ELSEPMEFQYLPDTDDR	ELSEPMEFQYLPDTDDR	3	ELSEPMEFQYLPDTDDR3	5989.24	6992.62	5635.9
A0A8I6A5H5	A0A8I6A5H5	A0A8I6A5H5_RAT	Rela	RELA proto-oncogene, NF-kB subunit	1	ELSEPMEFQYLPDTDDRHR	ELSEPMEFQYLPDTDDRHR	4	ELSEPMEFQYLPDTDDRHR4	20001.6	16998.2	20804.7
P58751	P58751	RELN_RAT	Reln	Reelin	1	ELSEPTVYYTGDFEEWTR	ELSEPTVYYTGDFEEWTR	3	ELSEPTVYYTGDFEEWTR3	5176.03	10309	10695.6
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	ELSEVETVNPQFTGTQK	ELSEVETVNPQFTGTQK	2	ELSEVETVNPQFTGTQK2	39090.2	35876.2	28742.6
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	ELSEVETVNPQFTGTQK	ELSEVETVNPQFTGTQK	3	ELSEVETVNPQFTGTQK3	8616.1	10813.8	15248
Q6P7P5	Q6P7P5	5MP2_RAT	Bzw1	eIF5-mimic protein 2	1	ELSEYVR	ELSEYVR	2	ELSEYVR2	213115	237252	237191
D4AEG7	D4AEG7	D4AEG7_RAT	Tbc1d13	TBC1 domain family, member 13	1	ELSFSGIPCEGGLR	ELSFSGIPC(UniMod:4)EGGLR	2	ELSFSGIPC(UniMod:4)EGGLR2	7352.4		5335.18
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	ELSGECGLNNR	ELSGEC(UniMod:4)GLNNR	2	ELSGEC(UniMod:4)GLNNR2	8813.11	9913.98	5512.01
B5DF86	B5DF86	B5DF86_RAT	Cog8	Conserved oligomeric Golgi complex subunit 8	1	ELSGSGLDR	ELSGSGLDR	2	ELSGSGLDR2	43839	43896.9	30438.2
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	ELSHEDLEPPPEHVPPPPRPPK	ELSHEDLEPPPEHVPPPPRPPK	4	ELSHEDLEPPPEHVPPPPRPPK4	13184.1	13597.7	13717.4
A0A8I5Y9V4	A0A8I5Y9V4	A0A8I5Y9V4_RAT	Cars1	cysteine--tRNA ligase	1	ELSKGQTK	ELSKGQTK	1	ELSKGQTK1		5474.35	
P29315	P29315	RINI_RAT	Rnh1	Ribonuclease inhibitor	1	ELSLAGNELK	ELSLAGNELK	2	ELSLAGNELK2	90486.9	84529.9	79207.9
Q9Z0V6	Q9Z0V6	PRDX3_RAT	Prdx3	Thioredoxin-dependent peroxide reductase, mitochondrial	1	ELSLDDFK	ELSLDDFK	1	ELSLDDFK1	3024.74	5685	3288.26
Q9Z0V6	Q9Z0V6	PRDX3_RAT	Prdx3	Thioredoxin-dependent peroxide reductase, mitochondrial	1	ELSLDDFK	ELSLDDFK	2	ELSLDDFK2	509370	457708	469651
Q9Z0V6	Q9Z0V6	PRDX3_RAT	Prdx3	Thioredoxin-dependent peroxide reductase, mitochondrial	1	ELSLDDFKGK	ELSLDDFKGK	2	ELSLDDFKGK2	2169.59		
Q9Z0V6	Q9Z0V6	PRDX3_RAT	Prdx3	Thioredoxin-dependent peroxide reductase, mitochondrial	1	ELSLDDFKGK	ELSLDDFKGK	3	ELSLDDFKGK3	41772.8	62471.4	61980.2
Q5XI97	Q5XI97	AASD1_RAT	Aarsd1	Alanyl-tRNA editing protein Aarsd1	1	ELSLDDPEVEQVR	ELSLDDPEVEQVR	2	ELSLDDPEVEQVR2	12842.8	20370.1	16419.7
Q8R5M3	Q8R5M3	LRC15_RAT	Lrrc15	Leucine-rich repeat-containing protein 15	1	ELSLHTNALQDLDSNVFR	ELSLHTNALQDLDSNVFR	3	ELSLHTNALQDLDSNVFR3		4010.68	
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	ELSLIPFLCPER	ELSLIPFLC(UniMod:4)PER	2	ELSLIPFLC(UniMod:4)PER2	3986.24	4241.95	5764.5
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	ELSLSPSLLK	ELSLSPSLLK	2	ELSLSPSLLK2	3956.82	7954.62	10619.2
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	ELSMGDK	ELSMGDK	2	ELSMGDK2	8325.11	7492.48	13094
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	ELSMGDKEALPISESSFK	ELSMGDKEALPISESSFK	3	ELSMGDKEALPISESSFK3	28091.1	34872.9	26552
F1LT49	F1LT49	F1LT49_RAT	Lrrc47	Leucine rich repeat containing 47	1	ELSPDIAHLASLK	ELSPDIAHLASLK	2	ELSPDIAHLASLK2	7168.64	5528.33	6801.07
F1LT49	F1LT49	F1LT49_RAT	Lrrc47	Leucine rich repeat containing 47	1	ELSPDIAHLASLK	ELSPDIAHLASLK	3	ELSPDIAHLASLK3	19959.9	26966.3	21127.4
D3ZWS0	D3ZWS0	D3ZWS0_RAT	Scrib	Scribble planar cell polarity protein	1	ELSPEGPGK	ELSPEGPGK	2	ELSPEGPGK2	920.327	2514.89	3544.85
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	ELSPGSGPGETR	ELSPGSGPGETR	2	ELSPGSGPGETR2	34742.7	24126.7	31142.9
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	ELSPGSGPGETRK	ELSPGSGPGETRK	3	ELSPGSGPGETRK3	11844.2	12668.8	16031.1
Q569B7	Q569B7	RWDD4_RAT	Rwdd4	RWD domain-containing protein 4	1	ELSPVSFQYR	ELSPVSFQYR	2	ELSPVSFQYR2	27304.9	23621.6	28318.6
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	ELSQATIDSK	ELSQATIDSK	2	ELSQATIDSK2	11289.2	15623.3	15719.9
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	ELSQIEACQGPMQMR	ELSQIEAC(UniMod:4)QGPMQMR	2	ELSQIEAC(UniMod:4)QGPMQMR2	27753.4	27921.1	25870.9
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	ELSQIEACQGPMQMR	ELSQIEAC(UniMod:4)QGPMQMR	3	ELSQIEAC(UniMod:4)QGPMQMR3	8896.61	11989.2	13271.7
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	ELSQLSER	ELSQLSER	2	ELSQLSER2	14085.3	13326.5	11174.1
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	ELSQTLENEK	ELSQTLENEK	2	ELSQTLENEK2	19070.3	9406.01	19259.7
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	ELSSFYFSIVK	ELSSFYFSIVK	2	ELSSFYFSIVK2	5399.51		4652.33
A0A8I5Y9A0	A0A8I5Y9A0	A0A8I5Y9A0_RAT	Tex264	Testis expressed 264	1	ELSTPERGEE	ELSTPERGEE	2	ELSTPERGEE2	15281.3	24568.3	14037.8
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	ELSTTLNADEAVTR	ELSTTLNADEAVTR	2	ELSTTLNADEAVTR2	122783	133492	127786
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	ELSTTLNADEAVTR	ELSTTLNADEAVTR	3	ELSTTLNADEAVTR3	38065.6	37533.6	24650.3
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	ELSVEEQIK	ELSVEEQIK	2	ELSVEEQIK2	100621	85440.8	83210.9
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	ELSVEEQIKR	ELSVEEQIKR	3	ELSVEEQIKR3	8747.71	17576.6	21005.8
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	ELSVEQK	ELSVEQK	2	ELSVEQK2	138278	123743	138881
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	ELSVHSCEVK	ELSVHSC(UniMod:4)EVK	3	ELSVHSC(UniMod:4)EVK3	43935.8	35558.3	32795.9
A0A8I6GM04	A0A0G2K988;A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	0	ELSVIDGR	ELSVIDGR	2	ELSVIDGR2	164560	155401	147539
Q4FZV0	Q4FZV0	MANBA_RAT	Manba	Beta-mannosidase	1	ELSVLFYPWKPTSK	ELSVLFYPWKPTSK	3	ELSVLFYPWKPTSK3	15032.3	11990.8	16823.4
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	ELSVLLVEMK	ELSVLLVEMK	2	ELSVLLVEMK2	21488.5	18764.5	20310.1
A0A0G2K8D1	A0A0G2K8D1	A0A0G2K8D1_RAT	Mospd2	Motile sperm domain containing 2	1	ELSVNDLSESSIPR	ELSVNDLSESSIPR	2	ELSVNDLSESSIPR2	827639		
A0A0G2K8D1	A0A0G2K8D1	A0A0G2K8D1_RAT	Mospd2	Motile sperm domain containing 2	1	ELSVNDLSESSIPR	ELSVNDLSESSIPR	3	ELSVNDLSESSIPR3			3884.64
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	ELSVQCAGDWLPR	ELSVQC(UniMod:4)AGDWLPR	2	ELSVQC(UniMod:4)AGDWLPR2	65001.2	74021.1	63187.2
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	ELSVTISR	ELSVTISR	2	ELSVTISR2	105676	116296	94495.4
A0A8I6A6W3	A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	1	ELTADAR	ELTADAR	2	ELTADAR2	878467	781651	973193
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	ELTAVPYMAK	ELTAVPYMAK	2	ELTAVPYMAK2	11014.7	8359.78	10976.4
P62909	D3ZVH2;P62909;A0A8I6ASH0;A0A8I6GGS4	RS3_RAT	Rps3	Small ribosomal subunit protein uS3	0	ELTAVVQK	ELTAVVQK	2	ELTAVVQK2	24062.7	20413	22966.9
D4A748	D4A748	D4A748_RAT	Wdfy4	WDFY family member 4	1	ELTCVMLK	ELTC(UniMod:4)VMLK	2	ELTC(UniMod:4)VMLK2	2333.24	716.086	873.266
Q63525	Q63525	NUDC_RAT	Nudc	Nuclear migration protein nudC	1	ELTDEEAER	ELTDEEAER	2	ELTDEEAER2	31605.6	25962.6	19647.5
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	ELTDEEILASVMIK	ELTDEEILASVMIK	2	ELTDEEILASVMIK2	59126	63899.7	46778.6
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	ELTDEEILASVMIK	ELTDEEILASVMIK	3	ELTDEEILASVMIK3	20501.8	26139.6	15171.6
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	ELTDLDYRPIAMQSLWNIK	ELTDLDYRPIAMQSLWNIK	3	ELTDLDYRPIAMQSLWNIK3	13228.9	6106.48	13822.3
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	ELTDLLGLHPR	ELTDLLGLHPR	2	ELTDLLGLHPR2	24441	25642	17569.6
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	ELTDLLGLHPR	ELTDLLGLHPR	3	ELTDLLGLHPR3	210966	199137	185527
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	ELTDTGK	ELTDTGK	1	ELTDTGK1	183878		145673
D3ZYW7	D3ZYW7	FRDA_RAT	Fxn	Frataxin, mitochondrial	1	ELTEALNTK	ELTEALNTK	2	ELTEALNTK2	13028.8	24627.1	24136.7
A0A0G2JVT8	A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	1	ELTELSLSK	ELTELSLSK	2	ELTELSLSK2	7438.68	8673.2	6393.19
Q80VJ4	Q80VJ4	GPCP1_RAT	Gpcpd1	Glycerophosphocholine phosphodiesterase GPCPD1	1	ELTFDQLQLLK	ELTFDQLQLLK	2	ELTFDQLQLLK2	7187.68	7740.33	12298
D3ZJ86	D3ZJ86	SL9A6_RAT	Slc9a6	Sodium/hydrogen exchanger 6	1	ELTFGDHELVIR	ELTFGDHELVIR	3	ELTFGDHELVIR3	5016.03		4408.69
G3V8G2	G3V8G2	G3V8G2_RAT	Psmd5	26S proteasome non-ATPase regulatory subunit 5	1	ELTGEDVLVR	ELTGEDVLVR	2	ELTGEDVLVR2		6662.95	
Q5HZW9	Q5HZW9	Q5HZW9_RAT	Evi2a	Ecotropic viral integration site 2A	1	ELTGPNLLIQSTGVLTAAR	ELTGPNLLIQSTGVLTAAR	2	ELTGPNLLIQSTGVLTAAR2	13041.2	12359.1	8456.45
Q5HZW9	Q5HZW9	Q5HZW9_RAT	Evi2a	Ecotropic viral integration site 2A	1	ELTGPNLLIQSTGVLTAAR	ELTGPNLLIQSTGVLTAAR	3	ELTGPNLLIQSTGVLTAAR3	6034.13	6467.86	
P14270	P14270;P14646;P54748	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	0	ELTHLSEMSR	ELTHLSEMSR	2	ELTHLSEMSR2	7196.88	7556.26	7852.43
P14270	P14270;P14646;P54748	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	0	ELTHLSEMSR	ELTHLSEMSR	3	ELTHLSEMSR3	21090.3	28494.4	39984.2
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	ELTHVYR	ELTHVYR	2	ELTHVYR2	30759	30324	36317.9
A0A0U1RS29	A0A0U1RS29	A0A0U1RS29_RAT	Rgl2	Ral guanine nucleotide dissociation stimulator-like 2	1	ELTIPHSANVFYAMDGASHDFLLR	ELTIPHSANVFYAMDGASHDFLLR	4	ELTIPHSANVFYAMDGASHDFLLR4			8123.6
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	ELTLEVER	ELTLEVER	2	ELTLEVER2	11256.2	6333.52	11572.9
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	ELTLWINDK	ELTLWINDK	2	ELTLWINDK2	25511.9	28252.3	11493
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	ELTMVEK	ELTMVEK	2	ELTMVEK2	12734.3	13130	
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	ELTNICSPIISK	ELTNIC(UniMod:4)SPIISK	2	ELTNIC(UniMod:4)SPIISK2	53424.2	52142.4	43180.5
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	ELTNICSPIISKPK	ELTNIC(UniMod:4)SPIISKPK	2	ELTNIC(UniMod:4)SPIISKPK2	9474.79	6009.97	9440.79
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	ELTNICSPIISKPK	ELTNIC(UniMod:4)SPIISKPK	3	ELTNIC(UniMod:4)SPIISKPK3	47391.5	46454.5	56238.5
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	ELTNICSPIISKPKPK	ELTNIC(UniMod:4)SPIISKPKPK	2	ELTNIC(UniMod:4)SPIISKPKPK2	2812.08	630.611	
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	ELTNICSPIISKPKPK	ELTNIC(UniMod:4)SPIISKPKPK	3	ELTNIC(UniMod:4)SPIISKPKPK3	24521.1	30338.3	25090
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	ELTNICSPIISKPKPK	ELTNIC(UniMod:4)SPIISKPKPK	4	ELTNIC(UniMod:4)SPIISKPKPK4	76488.1	83887.5	93677
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	ELTNILK	ELTNILK	2	ELTNILK2	296165	285889	324982
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	ELTNQQEASVER	ELTNQQEASVER	2	ELTNQQEASVER2	80887.1	88326.6	75209.4
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	ELTPQVISAAR	ELTPQVISAAR	2	ELTPQVISAAR2	2.08545e+06	1.9091e+06	2.0111e+06
Q63186	Q63186	EI2BD_RAT	Eif2b4	Translation initiation factor eIF-2B subunit delta	1	ELTQEEK	ELTQEEK	1	ELTQEEK1	51346		
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	ELTSAEQR	ELTSAEQR	2	ELTSAEQR2	58539.9	50835.9	58169.3
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	ELTSEVGVMTISCK	ELTSEVGVMTISC(UniMod:4)K	2	ELTSEVGVMTISC(UniMod:4)K2	66366.3	84437.4	75327.4
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	ELTSEVGVMTISCK	ELTSEVGVMTISC(UniMod:4)K	3	ELTSEVGVMTISC(UniMod:4)K3	3388.88	4657.27	4613.21
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	ELTSQHPYAEVFIGR	ELTSQHPYAEVFIGR	3	ELTSQHPYAEVFIGR3	23028.7	16177.9	23678.5
Q4KLH3	Q4KLH3	OGRL1_RAT	Ogfrl1	Opioid growth factor receptor-like protein 1	1	ELTTYEIEEFK	ELTTYEIEEFK	2	ELTTYEIEEFK2		6066.87	
Q4KLH3	Q4KLH3	OGRL1_RAT	Ogfrl1	Opioid growth factor receptor-like protein 1	1	ELTTYEIEEFKK	ELTTYEIEEFKK	3	ELTTYEIEEFKK3	6303.37	8552.23	9093.18
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	ELTVDPTAAGDVR	ELTVDPTAAGDVR	2	ELTVDPTAAGDVR2	7968.24	7365.6	3969.16
A0A8I5YC01	A0A8I5YC01	A0A8I5YC01_RAT	Gimap1	GTPase, IMAP family member 1	1	ELVAECGDR	ELVAEC(UniMod:4)GDR	2	ELVAEC(UniMod:4)GDR2	23173.2	22030.3	23172.2
P97531	P97531	CIP4_RAT	Trip10	Cdc42-interacting protein 4	1	ELVAESLGIR	ELVAESLGIR	2	ELVAESLGIR2	10522.8	9364.25	14854.6
P30349	P30349	LKHA4_RAT	Lta4h	Leukotriene A-4 hydrolase	1	ELVALMSAIR	ELVALMSAIR	2	ELVALMSAIR2	7982.02	7897.21	6445.53
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	ELVALQEDK	ELVALQEDK	2	ELVALQEDK2	199140	178235	171080
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	ELVAQGK	ELVAQGK	1	ELVAQGK1		34039.8	
P22062	P22062	PIMT_RAT	Pcmt1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase	1	ELVDDSITNVK	ELVDDSITNVK	2	ELVDDSITNVK2	115800	100309	103088
P22062	P22062	PIMT_RAT	Pcmt1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase	1	ELVDDSITNVKK	ELVDDSITNVKK	3	ELVDDSITNVKK3	35066.1	27934	37366.5
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	ELVDEEADEVQELLSQAENWQR	ELVDEEADEVQELLSQAENWQR	3	ELVDEEADEVQELLSQAENWQR3		9502.77	
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	ELVDVMK	ELVDVMK	2	ELVDVMK2	33345.8	36875.4	52713.7
Q3ZAU6	Q3ZAU6	Q3ZAU6_RAT	Rnf14	RBR-type E3 ubiquitin transferase	1	ELVEADLFAR	ELVEADLFAR	2	ELVEADLFAR2	32205.3	34559.7	27043.7
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	ELVEAQELAR	ELVEAQELAR	2	ELVEAQELAR2	157216	151368	174868
Q62651	Q62651	ECH1_RAT	Ech1	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial	1	ELVECFQK	ELVEC(UniMod:4)FQK	2	ELVEC(UniMod:4)FQK2	22325.6	20822.4	15136.3
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	ELVEELHPLMK	ELVEELHPLMK	2	ELVEELHPLMK2	6436.2		
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	ELVEELHPLMK	ELVEELHPLMK	3	ELVEELHPLMK3	38334.1	45830.5	38910.9
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	ELVEFAQDDDR	ELVEFAQDDDR	2	ELVEFAQDDDR2	35717.9	34234.6	41702.7
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	ELVEFAQDDDRLR	ELVEFAQDDDRLR	3	ELVEFAQDDDRLR3	353081	355995	368239
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	ELVEFAQDDDRLREER	ELVEFAQDDDRLREER	3	ELVEFAQDDDRLREER3	14251.2		6022.87
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	ELVELSQASPHDISNVLK	ELVELSQASPHDISNVLK	3	ELVELSQASPHDISNVLK3	522437	552209	520114
A0A8I6AAA9	A0A8I6AAA9	A0A8I6AAA9_RAT	Lrch1	Leucine rich repeats and calponin homology domain containing 1	1	ELVEQLR	ELVEQLR	2	ELVEQLR2	27976.9	44048.9	33174.9
Q2M2R8	Q2M2R8	PEX5_RAT	Pex5	Peroxisomal targeting signal 1 receptor	1	ELVESECGGANPLMK	ELVESEC(UniMod:4)GGANPLMK	2	ELVESEC(UniMod:4)GGANPLMK2	2666.72	3104.65	1021.05
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	ELVEVIK	ELVEVIK	2	ELVEVIK2	40074.7	34320.3	39540.1
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	ELVEVIKK	ELVEVIKK	2	ELVEVIKK2	10445.8	7862.31	5607.38
Q6VV72	Q6VV72;A0A8I6A8I7	IF1A_RAT	Eif1a	Eukaryotic translation initiation factor 1A	0	ELVFKEDGQEYAQVIK	ELVFKEDGQEYAQVIK	3	ELVFKEDGQEYAQVIK3	23421.3	16701.7	25061.8
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	ELVFSVLLHR	ELVFSVLLHR	3	ELVFSVLLHR3	23465.5	15435	18264.4
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	ELVGPVAR	ELVGPVAR	2	ELVGPVAR2	74411.7	61777.3	67887.5
A0A0G2JYR1	A0A0G2JYR1	A0A0G2JYR1_RAT	Exoc6b	Exocyst complex component	1	ELVIAMEELK	ELVIAMEELK	2	ELVIAMEELK2	4503.45	6261.17	
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	ELVICPPVTR	ELVIC(UniMod:4)PPVTR	2	ELVIC(UniMod:4)PPVTR2	10732.1	5176.67	11627.3
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	ELVIILHK	ELVIILHK	2	ELVIILHK2	6759.01	2889.5	3724.86
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	ELVINAFSPDQALKK	ELVINAFSPDQALKK	3	ELVINAFSPDQALKK3	5933.45	3720.29	
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	ELVKEPLGNDGATPGAAPTSGPTASK	ELVKEPLGNDGATPGAAPTSGPTASK	3	ELVKEPLGNDGATPGAAPTSGPTASK3	11313	11098	12570.6
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	ELVLALYDYQEK	ELVLALYDYQEK	2	ELVLALYDYQEK2	48025	100851	4904.09
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	ELVLALYDYQEK	ELVLALYDYQEK	3	ELVLALYDYQEK3	4110.61	5116.47	8159.02
P49911	P49911	AN32A_RAT	Anp32a	Acidic leucine-rich nuclear phosphoprotein 32 family member A	1	ELVLDNCR	ELVLDNC(UniMod:4)R	2	ELVLDNC(UniMod:4)R2	173768	205621	170352
P29315	P29315	RINI_RAT	Rnh1	Ribonuclease inhibitor	1	ELVLSNNDFHEAGIHTLCQGLK	ELVLSNNDFHEAGIHTLC(UniMod:4)QGLK	3	ELVLSNNDFHEAGIHTLC(UniMod:4)QGLK3	7119.53	6342.3	10153.2
P29315	P29315	RINI_RAT	Rnh1	Ribonuclease inhibitor	1	ELVLSNNDFHEAGIHTLCQGLK	ELVLSNNDFHEAGIHTLC(UniMod:4)QGLK	4	ELVLSNNDFHEAGIHTLC(UniMod:4)QGLK4	7784.08	25183.3	11421.7
Q8CGS4	Q8CGS4	CHMP3_RAT	Chmp3	Charged multivesicular body protein 3	1	ELVNEWSLK	ELVNEWSLK	2	ELVNEWSLK2	225003	215115	226268
Q6IRE4	Q6IRE4	TS101_RAT	Tsg101	Tumor susceptibility gene 101 protein	1	ELVNLTGTIPVR	ELVNLTGTIPVR	2	ELVNLTGTIPVR2	51135.5	48336.3	53432
Q8R491	Q8R491	EHD3_RAT	Ehd3	EH domain-containing protein 3	1	ELVNNLAEIYGR	ELVNNLAEIYGR	2	ELVNNLAEIYGR2	33067.9	30040.7	31923.2
Q641Z6	Q641Z6	EHD1_RAT	Ehd1	EH domain-containing protein 1	1	ELVNNLGEIYQK	ELVNNLGEIYQK	2	ELVNNLGEIYQK2	7156.31	5730.91	9433.84
P15651	P15651	ACADS_RAT	Acads	Short-chain specific acyl-CoA dehydrogenase, mitochondrial	1	ELVPIAAQLDK	ELVPIAAQLDK	2	ELVPIAAQLDK2	15795	11532.8	14816.5
P15651	P15651	ACADS_RAT	Acads	Short-chain specific acyl-CoA dehydrogenase, mitochondrial	1	ELVPIAAQLDKEHLFPTSQVK	ELVPIAAQLDKEHLFPTSQVK	4	ELVPIAAQLDKEHLFPTSQVK4	26411	25204.9	25675.9
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	ELVPSDTLLGLPK	ELVPSDTLLGLPK	2	ELVPSDTLLGLPK2	144563	152527	161420
D3ZZA8	D3ZZA8	D3ZZA8_RAT	Sec24a	SEC24 homolog A, COPII coat complex component	1	ELVQDLLK	ELVQDLLK	2	ELVQDLLK2	13885.2	7962.99	6951.02
A0A0G2K7W5	A0A0G2K7W5	A0A0G2K7W5_RAT	Ahsa2	Activator of HSP90 ATPase homolog 2	1	ELVQGFSK	ELVQGFSK	2	ELVQGFSK2	6304.67	3827.56	
A0A8I6ALB6	A0A8I6ALB6	A0A8I6ALB6_RAT	Tbc1d2b	TBC1 domain family, member 2B	1	ELVQLLQQTVR	ELVQLLQQTVR	2	ELVQLLQQTVR2	2253.64	5909.72	3373.82
Q6P7Q1	Q6P7Q1	BABA2_RAT	Babam2	BRISC and BRCA1-A complex member 2	1	ELVQQYHQFQCGR	ELVQQYHQFQC(UniMod:4)GR	3	ELVQQYHQFQC(UniMod:4)GR3		6511.87	7165.61
A0A8I5ZVG9	A0A8I5ZVG9	A0A8I5ZVG9_RAT	Ap1s2	AP complex subunit sigma	1	ELVQTVLAR	ELVQTVLAR	2	ELVQTVLAR2	12291.6	9147.43	13459
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	ELVQVQTLMDNMTLER	ELVQVQTLMDNMTLER	3	ELVQVQTLMDNMTLER3	3659.12	2700.03	7973.88
Q6P799	Q6P799	SYSC_RAT	Sars1	Serine--tRNA ligase, cytoplasmic	1	ELVSCSNCTDYQAR	ELVSC(UniMod:4)SNC(UniMod:4)TDYQAR	2	ELVSC(UniMod:4)SNC(UniMod:4)TDYQAR2	9083.85	6497.67	5739.28
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	ELVSDANQHVK	ELVSDANQHVK	2	ELVSDANQHVK2	46789.1	25264.1	32547.5
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	ELVSDANQHVK	ELVSDANQHVK	3	ELVSDANQHVK3	419031	348684	320788
Q4QQT4	Q4QQT4	2AAB_RAT	Ppp2r1b	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	1	ELVSDTNQHVK	ELVSDTNQHVK	3	ELVSDTNQHVK3	9608.09	4646.78	10513.8
A0A8I5ZWT7	A0A8I5ZWT7	A0A8I5ZWT7_RAT	ENSRNOG00000070329	Perilipin	1	ELVSSTVSGAR	ELVSSTVSGAR	2	ELVSSTVSGAR2	17018.7	18232.9	18782.3
A0A8I6APP3	A0A8I6APP3	A0A8I6APP3_RAT	Plekho2	Pleckstrin homology domain containing O2	1	ELVTLYR	ELVTLYR	2	ELVTLYR2	131294	261404	329007
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	ELVTQMIQR	ELVTQMIQR	2	ELVTQMIQR2	26088	32922.2	24263.6
P53563	E9PU78;P53563	B2CL1_RAT	Bcl2l1	Bcl-2-like protein 1	0	ELVVDFLSYK	ELVVDFLSYK	2	ELVVDFLSYK2	71692.9	49410	43231
F1M4J1	F1M4J1	F1M4J1_RAT	LOC100294508	Dyslexia susceptibility 2-like	1	ELVVSAGK	ELVVSAGK	2	ELVVSAGK2	32888.6	28186.2	34478.8
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	ELVVTNLGFDTR	ELVVTNLGFDTR	2	ELVVTNLGFDTR2	100586	100317	91761.8
Q9QXY4	Q9QXY4	OGFR_RAT	Ogfr	Opioid growth factor receptor	1	ELVYFAWEHFKPR	ELVYFAWEHFKPR	3	ELVYFAWEHFKPR3	14866.8	20801.1	20659.1
Q9QXY4	Q9QXY4	OGFR_RAT	Ogfr	Opioid growth factor receptor	1	ELVYFAWEHFKPR	ELVYFAWEHFKPR	4	ELVYFAWEHFKPR4	27502.2	33531.2	26037.7
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	ELWALVR	ELWALVR	2	ELWALVR2	12662.7	12742.6	10324.1
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	ELWCYNAVVADAR	ELWC(UniMod:4)YNAVVADAR	2	ELWC(UniMod:4)YNAVVADAR2	7856.73	5700.05	11008.1
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	ELWCYNAVVADAR	ELWC(UniMod:4)YNAVVADAR	3	ELWC(UniMod:4)YNAVVADAR3	5535.94	4182.76	6147.72
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	ELWDSSEPASAPRPPQSPVSPIVLR	ELWDSSEPASAPRPPQSPVSPIVLR	3	ELWDSSEPASAPRPPQSPVSPIVLR3	568300	653443	617759
Q2TGI9	Q2TGI9	Q2TGI9_RAT	Zdhhc21	Palmitoyltransferase	1	ELWELCNK	ELWELC(UniMod:4)NK	2	ELWELC(UniMod:4)NK2	16854.6	9742.11	19027.4
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	ELWFFLQSELK	ELWFFLQSELK	2	ELWFFLQSELK2	5533.88	5618.29	6628.58
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	ELWFFLQSELKK	ELWFFLQSELKK	3	ELWFFLQSELKK3	47186	18490.3	25439.6
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	ELWFSDDPNVTK	ELWFSDDPNVTK	2	ELWFSDDPNVTK2	131772	135258	119608
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	ELWIPFNSEDSQQLEEAHGSGK	ELWIPFNSEDSQQLEEAHGSGK	3	ELWIPFNSEDSQQLEEAHGSGK3	38016.2	27425.2	36165.3
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	ELWMDLDFAK	ELWMDLDFAK	2	ELWMDLDFAK2	21837.5	20832.4	15860.6
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	ELWNLLK	ELWNLLK	2	ELWNLLK2	17059	13930.4	15714.2
A0A8I5Y9M9	A0A8I5Y9M9	A0A8I5Y9M9_RAT	Sri	Sorcin	1	ELWTVLSGWR	ELWTVLSGWR	2	ELWTVLSGWR2	90414.1	71321.9	73955.1
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	ELWVIDEK	ELWVIDEK	2	ELWVIDEK2	28336.6	36570.3	35541.7
Q5FWT9	Q5FWT9	SIKE1_RAT	Sike1	Suppressor of IKBKE 1	1	ELWVSLEEHQDALELIMSK	ELWVSLEEHQDALELIMSK	3	ELWVSLEEHQDALELIMSK3	10653.2	7546.06	15061.4
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	ELYERPPHLYAVANAAYK	ELYERPPHLYAVANAAYK	3	ELYERPPHLYAVANAAYK3	8005.99	8819.09	6029.27
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	ELYERPPHLYAVANAAYK	ELYERPPHLYAVANAAYK	4	ELYERPPHLYAVANAAYK4	40869.5	19719.4	23699
D3ZKT0	D3ZKT0	TAM41_RAT	Tamm41	Phosphatidate cytidylyltransferase, mitochondrial	1	ELYESILQK	ELYESILQK	2	ELYESILQK2	12427.6	12751.2	15090.9
A0A8I5Y4X4	A0A8I5Y4X4	A0A8I5Y4X4_RAT	Nub1	Negative regulator of ubiquitin-like proteins 1	1	ELYIDPSK	ELYIDPSK	2	ELYIDPSK2	59646.3	55453.1	57818
Q9QXU2	Q9QXU2	SURF1_RAT	Surf1	Surfeit locus protein 1	1	ELYIMPR	ELYIMPR	2	ELYIMPR2	111248	94680.5	52085.3
Q6AYG5	Q6AYG5	ECHD1_RAT	Echdc1	Ethylmalonyl-CoA decarboxylase	1	ELYLEEALQNER	ELYLEEALQNER	2	ELYLEEALQNER2	10733.4	3228.32	9985.17
P49088	P49088	ASNS_RAT	Asns	Asparagine synthetase [glutamine-hydrolyzing]	1	ELYLFDVLR	ELYLFDVLR	2	ELYLFDVLR2	5166	3996.39	3539.37
B2RYU6	B2RYU6	TPC2L_RAT	Trappc2l	Trafficking protein particle complex subunit 2-like protein	1	ELYLGLLYPTEDYK	ELYLGLLYPTEDYK	2	ELYLGLLYPTEDYK2	31397.2	14880.4	19614.9
B5DFF2	A0A8I5ZR01;B5DFF2	B5DFF2_RAT	Rbpms2	RNA binding protein, mRNA processing factor 2	0	ELYLLFR	ELYLLFR	2	ELYLLFR2	45624.1	41417.3	32500
B5DFF2	A0A8I5ZR01;B5DFF2	B5DFF2_RAT	Rbpms2	RNA binding protein, mRNA processing factor 2	0	ELYLLFRPFK	ELYLLFRPFK	2	ELYLLFRPFK2	13585.8	8951.5	5533.21
B5DFF2	A0A8I5ZR01;B5DFF2	B5DFF2_RAT	Rbpms2	RNA binding protein, mRNA processing factor 2	0	ELYLLFRPFK	ELYLLFRPFK	3	ELYLLFRPFK3	38059.7	74358.4	44865.1
D4A758	D4A758	D4A758_RAT	Lrrc8b	Leucine rich repeat containing 8 VRAC subunit B	1	ELYLSGCVLPEQLSSMQPEGFQDLKNLR	ELYLSGC(UniMod:4)VLPEQLSSMQPEGFQDLKNLR	4	ELYLSGC(UniMod:4)VLPEQLSSMQPEGFQDLKNLR4	11938	21985.6	8719.51
Q5HZV9	Q5HZV9	PP1R7_RAT	Ppp1r7	Protein phosphatase 1 regulatory subunit 7	1	ELYLSHNGIEVIEGLENNNK	ELYLSHNGIEVIEGLENNNK	3	ELYLSHNGIEVIEGLENNNK3	26251.3	51574.6	31671.7
P02761	M0R8N5;M0R620;P02761;A0A096MKC6	MUP_RAT		Major urinary protein	0	ELYLVAYK	ELYLVAYK	2	ELYLVAYK2	61028.9	64371.6	61248
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	ELYPAFCIHNGGSDLER	ELYPAFC(UniMod:4)IHNGGSDLER	3	ELYPAFC(UniMod:4)IHNGGSDLER3	30159.3	22060.7	21603.8
Q5RJQ4	Q5RJQ4	SIR2_RAT	Sirt2	NAD-dependent protein deacetylase sirtuin-2	1	ELYPGQFKPTICHYFIR	ELYPGQFKPTIC(UniMod:4)HYFIR	3	ELYPGQFKPTIC(UniMod:4)HYFIR3	6579.27	8809.85	
Q5RJQ4	Q5RJQ4	SIR2_RAT	Sirt2	NAD-dependent protein deacetylase sirtuin-2	1	ELYPGQFKPTICHYFIR	ELYPGQFKPTIC(UniMod:4)HYFIR	4	ELYPGQFKPTIC(UniMod:4)HYFIR4	11824.5	8711.92	11061.2
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	ELYPSLEGQLK	ELYPSLEGQLK	2	ELYPSLEGQLK2	226865	219360	226286
Q3T1I9	Q3T1I9	RPAP1_RAT	Rpap1	RNA polymerase II-associated protein 1	1	ELYPVLMR	ELYPVLMR	2	ELYPVLMR2	9383.38	6975.57	7311.62
A0A0G2JU49	A0A0G2JU49	A0A0G2JU49_RAT	Mtx1	Metaxin 1	1	ELYQEAR	ELYQEAR	2	ELYQEAR2	32928.9	30595.3	30206.5
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	ELYSESDETFDQISK	ELYSESDETFDQISK	2	ELYSESDETFDQISK2	6271.09	7083.89	6237.17
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	ELYTHLCDVVDR	ELYTHLC(UniMod:4)DVVDR	3	ELYTHLC(UniMod:4)DVVDR3	7085.12	9030.3	7592.41
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	ELYTWVNMQGGTK	ELYTWVNMQGGTK	2	ELYTWVNMQGGTK2	11933.7	16398	12263.2
A0A140UHX9	A0A140UHX9	A0A140UHX9_RAT	Ccz1	CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated	1	ELYVILNQK	ELYVILNQK	2	ELYVILNQK2	5612.82	4089.48	4900.35
Q9JHW1	Q9JHW1	CBPD_RAT	Cpd	Carboxypeptidase D	1	ELYVMEISDNPGVHEPGEPEFK	ELYVMEISDNPGVHEPGEPEFK	3	ELYVMEISDNPGVHEPGEPEFK3		3025.94	
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	ELYYCVK	ELYYC(UniMod:4)VK	2	ELYYC(UniMod:4)VK2	20433.9	28502.6	25586.4
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	ELYYHGEPLNVNVHVTNNSAK	ELYYHGEPLNVNVHVTNNSAK	4	ELYYHGEPLNVNVHVTNNSAK4		5532.47	
P00507	P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	1	EMAAVVK	EMAAVVK	1	EMAAVVK1	6524.98	6251.56	10053.4
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	EMADRYDR	EMADRYDR	2	EMADRYDR2	10277.4	12889.6	6651.74
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	EMAEAFAGEIPK	EMAEAFAGEIPK	2	EMAEAFAGEIPK2	21452	19215.8	40536.5
Q9ERR2	Q9ERR2	COMD5_RAT	Commd5	COMM domain-containing protein 5	1	EMAELEK	EMAELEK	2	EMAELEK2	13804.6	9519.81	8969.44
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	EMAEQFR	EMAEQFR	2	EMAEQFR2	107929	131697	117904
D3ZMI0	D3ZMI0	D3ZMI0_RAT	Angptl8	Angiopoietin-like 8	1	EMAEQQQWLR	EMAEQQQWLR	2	EMAEQQQWLR2	173933	206918	201127
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	EMAIPVLEAR	EMAIPVLEAR	2	EMAIPVLEAR2	85647.2	75097.6	64965.9
Q66H09	Q66H09	Q66H09_RAT	Ttc1	Tetratricopeptide repeat domain 1	1	EMAITDCSK	EMAITDC(UniMod:4)SK	2	EMAITDC(UniMod:4)SK2	7476.85	6852.66	5909.86
B5DFF4	B5DFF4	B5DFF4_RAT	Vps37c	VPS37C subunit of ESCRT-I	1	EMALATNR	EMALATNR	2	EMALATNR2	29215.7	25512.9	30666.1
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	EMALLATSLPDGIMVK	EMALLATSLPDGIMVK	2	EMALLATSLPDGIMVK2	147629	129736	156051
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	EMALLATSLPDGIMVK	EMALLATSLPDGIMVK	3	EMALLATSLPDGIMVK3	50658.7	84136.8	60265.7
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	EMAQIGLR	EMAQIGLR	2	EMAQIGLR2	35790	36797.9	33702.3
G3V7N6	G3V7N6	G3V7N6_RAT	Mboat7	Membrane bound O-acyltransferase domain containing 7-like 1	1	EMASGFSK	EMASGFSK	2	EMASGFSK2	60909.8	61629.6	68391
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	EMASGVNTR	EMASGVNTR	2	EMASGVNTR2	68879.6	87863.6	81335.1
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	EMASPSSESNESK	EMASPSSESNESK	2	EMASPSSESNESK2	43000.3	47891.2	57297.1
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	EMASVGEPDK	EMASVGEPDK	2	EMASVGEPDK2	8258.35	10247.1	
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	EMATISEDVIIVTSSLTK	EMATISEDVIIVTSSLTK	2	EMATISEDVIIVTSSLTK2	11082.6	12891.9	6746.23
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	EMATISEDVIIVTSSLTK	EMATISEDVIIVTSSLTK	3	EMATISEDVIIVTSSLTK3	6133.55	5112.54	5331.19
P02466	P02466	CO1A2_RAT	Col1a2	Collagen alpha-2(I) chain	1	EMATQLAFMR	EMATQLAFMR	2	EMATQLAFMR2	5833.24	7016.02	7533.36
B4F7E7	B4F7E7	PALS1_RAT	Pals1	Protein PALS1	1	EMAVDCPGDLGTR	EMAVDC(UniMod:4)PGDLGTR	2	EMAVDC(UniMod:4)PGDLGTR2	13232	11353.3	9843.85
A0A0G2KAF4	A0A0G2KAF4	A0A0G2KAF4_RAT	Nfxl1	Nuclear transcription factor, X-box binding-like 1	1	EMCHPGECPYNCNQK	EMC(UniMod:4)HPGEC(UniMod:4)PYNC(UniMod:4)NQK	3	EMC(UniMod:4)HPGEC(UniMod:4)PYNC(UniMod:4)NQK3	8244.51	1953.26	10299.3
B5DEY9	B5DEY9	B5DEY9_RAT	Csgalnact1	Hexosyltransferase	1	EMCIQQDGR	EMC(UniMod:4)IQQDGR	2	EMC(UniMod:4)IQQDGR2	9804.55	5683.82	6037.69
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	EMCSNIQYK	EMC(UniMod:4)SNIQYK	2	EMC(UniMod:4)SNIQYK2	6412.23	12904.5	6717.73
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	EMCVSGGDHTQLTDLSPEEK	EMC(UniMod:4)VSGGDHTQLTDLSPEEK	3	EMC(UniMod:4)VSGGDHTQLTDLSPEEK3	18044.2	25562.2	6786.87
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	EMDAALK	EMDAALK	1	EMDAALK1	1.04043e+06	1.15996e+06	1.15531e+06
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	EMDAALK	EMDAALK	2	EMDAALK2	4.58911e+07	5.25161e+07	5.16544e+07
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	EMDAALKEQGYIFGDYIER	EMDAALKEQGYIFGDYIER	3	EMDAALKEQGYIFGDYIER3	1.68469e+06	1.92333e+06	1.85228e+06
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	EMDAALKEQGYIFGDYIER	EMDAALKEQGYIFGDYIER	4	EMDAALKEQGYIFGDYIER4	87867.8	101300	106366
D3ZL95	D3ZL95	D3ZL95_RAT	Usp40	ubiquitinyl hydrolase 1	1	EMDAANVLLQTR	EMDAANVLLQTR	2	EMDAANVLLQTR2	5388.37	5390.4	5260.52
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	EMDEAATAEER	EMDEAATAEER	2	EMDEAATAEER2	107555	151570	100732
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	EMDEQIR	EMDEQIR	1	EMDEQIR1	18942.4	20046.6	20377.4
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	EMDEQIR	EMDEQIR	2	EMDEQIR2	3.6269e+06	3.51571e+06	3.6999e+06
F7F1X7	F7F1X7	F7F1X7_RAT	Pmm2	Phosphomannomutase	1	EMDGFLQK	EMDGFLQK	2	EMDGFLQK2	3985.09	7930.33	4158.65
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	EMDKDLNSVVIAVK	EMDKDLNSVVIAVK	3	EMDKDLNSVVIAVK3	62304.8	61572	55996.4
Q63369	Q63369	NFKB1_RAT	Nfkb1	Nuclear factor NF-kappa-B p105 subunit	1	EMDLSVVR	EMDLSVVR	2	EMDLSVVR2	18684.2	26313.2	18138.7
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	EMDPDIDTMCPGQEAGSAEEK	EMDPDIDTMC(UniMod:4)PGQEAGSAEEK	3	EMDPDIDTMC(UniMod:4)PGQEAGSAEEK3	3527.19		7538.58
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	EMDPHVPNVTSLCLQYMK	EMDPHVPNVTSLC(UniMod:4)LQYMK	3	EMDPHVPNVTSLC(UniMod:4)LQYMK3	25156.7	19543.1	21620.3
Q4KM73	Q4KM73	KCY_RAT	Cmpk1	UMP-CMP kinase	1	EMDQTMAANAQK	EMDQTMAANAQK	2	EMDQTMAANAQK2	20784.2	23522.4	22017.6
F7ELS2	A0A8I6AGL9;F7ELS2;A0A8I6GM53	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	0	EMDRETLIDVAR	EMDRETLIDVAR	2	EMDRETLIDVAR2	4475.02	9708.97	1379.43
F7ELS2	A0A8I6AGL9;F7ELS2;A0A8I6GM53	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	0	EMDRETLIDVAR	EMDRETLIDVAR	3	EMDRETLIDVAR3	288207	298231	320951
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	EMEAELEDER	EMEAELEDER	2	EMEAELEDER2	53274.9	82852.7	65578.1
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	EMEAELEDERK	EMEAELEDERK	2	EMEAELEDERK2	837481	899449	888078
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	EMEAELEDERK	EMEAELEDERK	3	EMEAELEDERK3	1.05727e+07	1.41065e+07	1.45167e+07
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	EMEAELEDERKQR	EMEAELEDERKQR	3	EMEAELEDERKQR3	14566.4	19988.3	40364
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	EMEAELEDERKQR	EMEAELEDERKQR	4	EMEAELEDERKQR4	17920.6	16742	27150.5
Q63344	Q63344	MOT2_RAT	Slc16a7	Monocarboxylate transporter 2	1	EMEALSR	EMEALSR	2	EMEALSR2	18418.8	28853.8	20014.3
A0A8I6A5F4	A0A8I6A5F4	A0A8I6A5F4_RAT	Tmem40	Transmembrane protein 40	1	EMEASGSSSQSPNSSAVHR	EMEASGSSSQSPNSSAVHR	3	EMEASGSSSQSPNSSAVHR3	37827.1	33003.5	64587.9
P15473	P15473	IBP3_RAT	Igfbp3	Insulin-like growth factor-binding protein 3	1	EMEDTLNHLK	EMEDTLNHLK	2	EMEDTLNHLK2	11376.3	12771.4	6252.7
P15473	P15473	IBP3_RAT	Igfbp3	Insulin-like growth factor-binding protein 3	1	EMEDTLNHLK	EMEDTLNHLK	3	EMEDTLNHLK3	53376.8	52903.6	44894.6
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	EMEDWISSLK	EMEDWISSLK	2	EMEDWISSLK2	144044	131406	126118
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	EMEEATASAQR	EMEEATASAQR	2	EMEEATASAQR2	20584.6	20776.2	17958.3
A0A8I5ZQH9	A0A8I5ZQH9	A0A8I5ZQH9_RAT	Dcaf6	DDB1 and CUL4 associated factor 6	1	EMEELDTLNIR	EMEELDTLNIR	2	EMEELDTLNIR2	3538.94	3790.29	3306.83
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	EMEELSQALSQK	EMEELSQALSQK	2	EMEELSQALSQK2	29565.1	35378.1	31230.5
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	EMEESIR	EMEESIR	2	EMEESIR2	937041	970509	981395
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	EMEESSEK	EMEESSEK	1	EMEESSEK1			5025.88
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	EMEESSEK	EMEESSEK	2	EMEESSEK2			179860
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	EMEHAMLIR	EMEHAMLIR	2	EMEHAMLIR2	9321.83	10933.3	5995.17
D3ZCJ3	D3ZCJ3	D3ZCJ3_RAT	Mfsd6	Major facilitator superfamily domain containing 6	1	EMEIPQVER	EMEIPQVER	2	EMEIPQVER2	53661.4	50132.9	60576.5
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	EMELELAQTK	EMELELAQTK	2	EMELELAQTK2	8731.22	7449.67	9488.92
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	EMELIYAR	EMELIYAR	2	EMELIYAR2	274305	240878	289373
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	EMEQAVEQCGR	EMEQAVEQC(UniMod:4)GR	2	EMEQAVEQC(UniMod:4)GR2	24688.9	26190.5	22663.4
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	EMEQFVK	EMEQFVK	2	EMEQFVK2	121824	80204.6	124334
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	EMEQLVLDK	EMEQLVLDK	2	EMEQLVLDK2	131972	128007	143285
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	EMEQLVLDKK	EMEQLVLDKK	2	EMEQLVLDKK2	897.164	2555.1	1751.48
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	EMEQLVLDKK	EMEQLVLDKK	3	EMEQLVLDKK3	25013.6	38360.8	24181.4
D3ZQL1	D3ZQL1	D3ZQL1_RAT	Emc7	ER membrane protein complex subunit 7	1	EMEQSMNMLNSNHELPDVSEFMTR	EMEQSMNMLNSNHELPDVSEFMTR	3	EMEQSMNMLNSNHELPDVSEFMTR3	20204.6	18882	29489.4
F1MAR6	F1MAR6	F1MAR6_RAT	Prodh	Proline dehydrogenase	1	EMESCTSEAER	EMESC(UniMod:4)TSEAER	2	EMESC(UniMod:4)TSEAER2	5674.74	1894.92	
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	EMESRDEEVEEAR	EMESRDEEVEEAR	3	EMESRDEEVEEAR3	14102.2	12649.3	17770.3
D3ZHW0	D3ZHW0	D3ZHW0_RAT	Dhx29	ATP-dependent RNA helicase DHX29	1	EMETLEDHPIFNPAIK	EMETLEDHPIFNPAIK	3	EMETLEDHPIFNPAIK3	9720.42		5542.58
Q04589	Q04589;A0A8I6A1Z2	FGFR1_RAT	Fgfr1	Fibroblast growth factor receptor 1	0	EMEVLHLR	EMEVLHLR	2	EMEVLHLR2	11138.8	8099.1	10188.3
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	EMFDEVSYEK	EMFDEVSYEK	2	EMFDEVSYEK2	10738.3	12148.2	10757.9
Q71UF4	Q71UF4	RBBP7_RAT	Rbbp7	Histone-binding protein RBBP7	1	EMFEDTVEER	EMFEDTVEER	2	EMFEDTVEER2	7813.54	4155.66	7303.05
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	EMFELQCLALR	EMFELQC(UniMod:4)LALR	2	EMFELQC(UniMod:4)LALR2	23910.3	30043.4	17512
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	EMFGGFFK	EMFGGFFK	2	EMFGGFFK2	125260	130949	123257
Q5HZY2	Q5HZY2	SAR1B_RAT	Sar1b	GTP-binding protein SAR1b	1	EMFGLYGQTTGK	EMFGLYGQTTGK	2	EMFGLYGQTTGK2	50366.2	37597.4	34868.6
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	EMFNPMYALFR	EMFNPMYALFR	2	EMFNPMYALFR2	10010.5	11489.6	15125.9
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	EMFNYAR	EMFNYAR	2	EMFNYAR2	143296	137455	159578
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	EMFSQLADLDDELDGMGAIGR	EMFSQLADLDDELDGMGAIGR	3	EMFSQLADLDDELDGMGAIGR3	18324.8	19387.6	
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	EMFTYLLDGFK	EMFTYLLDGFK	2	EMFTYLLDGFK2	10476.6	18380.4	21015.4
P43253	P43253	PI2R_RAT	Ptgir	Prostacyclin receptor	1	EMGDLHAFR	EMGDLHAFR	2	EMGDLHAFR2	12248.4	8300.89	8274.25
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	EMGEAFAADIPR	EMGEAFAADIPR	2	EMGEAFAADIPR2	13340.1	8849.44	5655.61
P27605	P27605	HPRT_RAT	Hprt1	Hypoxanthine-guanine phosphoribosyltransferase	1	EMGGHHIVALCVLK	EMGGHHIVALC(UniMod:4)VLK	3	EMGGHHIVALC(UniMod:4)VLK3	21236	6298.1	20078.3
P27605	P27605	HPRT_RAT	Hprt1	Hypoxanthine-guanine phosphoribosyltransferase	1	EMGGHHIVALCVLK	EMGGHHIVALC(UniMod:4)VLK	4	EMGGHHIVALC(UniMod:4)VLK4	14360.5	16156	13739.2
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	EMGIPLGPR	EMGIPLGPR	2	EMGIPLGPR2	62279.7	47002.1	41606.9
Q6AYG5	Q6AYG5	ECHD1_RAT	Echdc1	Ethylmalonyl-CoA decarboxylase	1	EMGIVPSWGGASR	EMGIVPSWGGASR	2	EMGIVPSWGGASR2	57761.2	43506.6	56672.3
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	EMGPTYADPVCLSK	EMGPTYADPVC(UniMod:4)LSK	2	EMGPTYADPVC(UniMod:4)LSK2	727684	530473	511510
A0A0G2K857	A0A0G2K857	A0A0G2K857_RAT	Kifc2	Kinesin-like protein	1	EMGTGGHHHVTLSMVEIYNEAVR	EMGTGGHHHVTLSMVEIYNEAVR	4	EMGTGGHHHVTLSMVEIYNEAVR4	3956.27		
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	EMGVHISR	EMGVHISR	2	EMGVHISR2	13826.9	11711.1	2825.52
P18395	P18395	CSDE1_RAT	Csde1	Cold shock domain-containing protein E1	1	EMGVIAAMR	EMGVIAAMR	2	EMGVIAAMR2	17352.9	18997.5	14226
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	EMHCSENGLWSNEKPQCVEISCLPPR	EMHC(UniMod:4)SENGLWSNEKPQC(UniMod:4)VEISC(UniMod:4)LPPR	4	EMHC(UniMod:4)SENGLWSNEKPQC(UniMod:4)VEISC(UniMod:4)LPPR4	20225.5	27999.3	27696.2
A0A8I5ZZZ6	A0A8I5ZZZ6	A0A8I5ZZZ6_RAT	Riok3	Serine/threonine-protein kinase RIO3	1	EMHNLTR	EMHNLTR	2	EMHNLTR2	28451.8	30491.4	22524.5
Q5M9F5	Q5M9F5	DPH6_RAT	Dph6	Diphthine--ammonia ligase	1	EMIASNIEAIIIK	EMIASNIEAIIIK	2	EMIASNIEAIIIK2	2504.39	2575.48	1151.12
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	EMIDIYSTR	EMIDIYSTR	2	EMIDIYSTR2	160360	176916	155771
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	EMIDIYSTREPQLAFHQR	EMIDIYSTREPQLAFHQR	4	EMIDIYSTREPQLAFHQR4	16538.5	14726.7	11101
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EMIDKWEDR	EMIDKWEDR	3	EMIDKWEDR3	60885.7	84482.1	72938.4
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EMIDKWEDRWEWLR	EMIDKWEDRWEWLR	3	EMIDKWEDRWEWLR3	80271.8	90185.3	69741.7
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EMIDKWEDRWEWLR	EMIDKWEDRWEWLR	4	EMIDKWEDRWEWLR4	168879	180739	134555
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	EMIESMK	EMIESMK	2	EMIESMK2	84416.3	56164.1	98585.5
P15943	P15943	APLP2_RAT	Aplp2	Amyloid beta precursor like protein 2	1	EMIFNAER	EMIFNAER	2	EMIFNAER2	26230.7	23456	17678.7
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	EMIFVGR	EMIFVGR	2	EMIFVGR2	20179.7	21436.8	16602.9
M0RB87	M0RB87	M0RB87_RAT	Gdf2	Growth differentiation factor 2	1	EMIGHEQETVLVK	EMIGHEQETVLVK	3	EMIGHEQETVLVK3	16345.5	8278.26	8124.8
D4AEG7	D4AEG7	D4AEG7_RAT	Tbc1d13	TBC1 domain family, member 13	1	EMIIQPGIAK	EMIIQPGIAK	2	EMIIQPGIAK2	4707.61	2871.81	1591.35
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	EMIPAQLPK	EMIPAQLPK	2	EMIPAQLPK2	200064	202616	187842
D3ZX21	D3ZX21	D3ZX21_RAT	Ap4e1	AP-4 complex subunit epsilon	1	EMIPAVLPLIEEK	EMIPAVLPLIEEK	2	EMIPAVLPLIEEK2	3661.96	748.029	
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	EMIPGRDEDQLPFSK	EMIPGRDEDQLPFSK	3	EMIPGRDEDQLPFSK3	90619.4	135298	126117
Q8CGZ2	Q8CGZ2	ADIP_RAT	Ssx2ip	Afadin- and alpha-actinin-binding protein	1	EMISLQER	EMISLQER	2	EMISLQER2	5461.57	9795.86	11614.7
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	EMKPEHLFQHLHEVGYAAPPSPPQTR	EMKPEHLFQHLHEVGYAAPPSPPQTR	4	EMKPEHLFQHLHEVGYAAPPSPPQTR4	28794.2	23261.9	19311.8
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	EMLAAACQMFLGK	EMLAAAC(UniMod:4)QMFLGK	2	EMLAAAC(UniMod:4)QMFLGK2	8527.21	8750.63	9246.77
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	EMLANCSSLR	EMLANC(UniMod:4)SSLR	2	EMLANC(UniMod:4)SSLR2	13318.5	12156.8	9121.8
D4AD37	D4AD37	IMPA3_RAT	Bpnt2	Golgi-resident adenosine 3',5'-bisphosphate 3'-phosphatase	1	EMLAVAVLAAER	EMLAVAVLAAER	2	EMLAVAVLAAER2	33510	35112.4	29413.3
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	EMLAVDAPR	EMLAVDAPR	2	EMLAVDAPR2	37751.1	26914.1	29597.9
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	EMLDILVK	EMLDILVK	2	EMLDILVK2	52569.4	53378.5	43698.7
D3ZHA1	D3ZHA1	D3ZHA1_RAT	B4gat1	Beta-1,4-glucuronyltransferase 1	1	EMLDQSNHWDGTALVVPAFEIR	EMLDQSNHWDGTALVVPAFEIR	3	EMLDQSNHWDGTALVVPAFEIR3	3878.08	9035.32	4491.99
Q68FP9	Q68FP9	COG6_RAT	Cog6	Conserved oligomeric Golgi complex subunit 6	1	EMLEALK	EMLEALK	2	EMLEALK2	193640	207659	210585
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	EMLEGFYEEISK	EMLEGFYEEISK	2	EMLEGFYEEISK2	34393.2	35773.6	22944.3
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	EMLELLIK	EMLELLIK	2	EMLELLIK2	19386.8	16765.9	17676.3
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	EMLFGSLAR	EMLFGSLAR	2	EMLFGSLAR2	53034.4	63935.8	60951.6
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	EMLGGEIIPR	EMLGGEIIPR	2	EMLGGEIIPR2	49025.4	18207.2	31026.8
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	EMLGLYTENEGK	EMLGLYTENEGK	2	EMLGLYTENEGK2	113971	100605	97798.3
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	EMLIEVIEK	EMLIEVIEK	2	EMLIEVIEK2	61638.9	76812	67416.7
Q4V8A6	Q4V8A6	BL1S6_RAT	Bloc1s6	Biogenesis of lysosome-related organelles complex 1 subunit 6	1	EMLLLHEK	EMLLLHEK	2	EMLLLHEK2	2848.92	4495.68	
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	EMLNISGPPLK	EMLNISGPPLK	2	EMLNISGPPLK2	36544.5	14347	29355.9
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	EMLQGMDYNK	EMLQGMDYNK	2	EMLQGMDYNK2	7883.81	7166.94	7687.15
P56522	P56522	ADRO_RAT	Fdxr	NADPH:adrenodoxin oxidoreductase, mitochondrial	1	EMLQLLGH	EMLQLLGH	2	EMLQLLGH2	9938.8	6053.74	8099.96
P34058	P82995;P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	EMLQQSK	EMLQQSK	1	EMLQQSK1	45184.3	46389.5	41861.9
P34058	P82995;P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	EMLQQSK	EMLQQSK	2	EMLQQSK2	2.37699e+06	2.65552e+06	2.65557e+06
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	EMLRDPELR	EMLRDPELR	2	EMLRDPELR2	11501.1	20436.9	15564.6
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	EMLRDPELR	EMLRDPELR	3	EMLRDPELR3	63257.6	71898.1	64753.1
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	EMLRDPEMR	EMLRDPEMR	2	EMLRDPEMR2	3098.06	4682.49	5254.72
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	EMLRDPEMR	EMLRDPEMR	3	EMLRDPEMR3	20769.1	28013.1	18467.1
A0A8I5ZRG3	A0A8I5ZRG3	A0A8I5ZRG3_RAT	Frmd4b	FERM domain containing 4B	1	EMLSTHSSPYK	EMLSTHSSPYK	2	EMLSTHSSPYK2	1982.04		5069.51
A0A8I5ZRG3	A0A8I5ZRG3	A0A8I5ZRG3_RAT	Frmd4b	FERM domain containing 4B	1	EMLSTHSSPYK	EMLSTHSSPYK	3	EMLSTHSSPYK3	69415	78939.1	68395.2
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	EMLTTFGTATYK	EMLTTFGTATYK	2	EMLTTFGTATYK2	8378.1	7541.4	9524.86
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	EMMAHAWNNYK	EMMAHAWNNYK	3	EMMAHAWNNYK3	54498.7	40291.5	48151.1
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	EMMDQAAAQLAQDNCELACCFIQK	EMMDQAAAQLAQDNC(UniMod:4)ELAC(UniMod:4)C(UniMod:4)FIQK	3	EMMDQAAAQLAQDNC(UniMod:4)ELAC(UniMod:4)C(UniMod:4)FIQK3	7574.91		6320.04
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	EMNDAAMFYTNR	EMNDAAMFYTNR	2	EMNDAAMFYTNR2	1.40278e+06	1.19278e+06	1.35646e+06
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	EMNDAAMFYTNR	EMNDAAMFYTNR	3	EMNDAAMFYTNR3	44523.9	39360.6	54535.5
P18266	P18266;P18265	GSK3B_RAT	Gsk3b	Glycogen synthase kinase-3 beta	0	EMNPNYTEFK	EMNPNYTEFK	2	EMNPNYTEFK2	22773.2	21169.3	28661.8
P18266	P18266;P18265	GSK3B_RAT	Gsk3b	Glycogen synthase kinase-3 beta	0	EMNPNYTEFKFPQIK	EMNPNYTEFKFPQIK	3	EMNPNYTEFKFPQIK3		2361.25	
M0R402	M0R402	M0R402_RAT	Tmx3	Thioredoxin-related transmembrane protein 3	1	EMPAVLVFK	EMPAVLVFK	2	EMPAVLVFK2	117436	93549.5	126629
Q5M7T2	Q5M7T2	SPRY7_RAT	Spryd7	SPRY domain-containing protein 7	1	EMPAVQLDTQHMGTDVVIVK	EMPAVQLDTQHMGTDVVIVK	3	EMPAVQLDTQHMGTDVVIVK3	12696.2	11574.3	21764.3
B5DFD1	B5DFD1	B5DFD1_RAT	Nudcd1	NudC domain-containing protein 1	1	EMPCFCLR	EMPC(UniMod:4)FC(UniMod:4)LR	2	EMPC(UniMod:4)FC(UniMod:4)LR2	28271.8	36669.8	14881.6
Q66H56	Q66H56	TTI2_RAT	Tti2	TELO2-interacting protein 2	1	EMPEILGQVAK	EMPEILGQVAK	2	EMPEILGQVAK2	4355.18	4184.02	12440.1
Q641Z6	Q641Z6	EHD1_RAT	Ehd1	EH domain-containing protein 1	1	EMPNVFGK	EMPNVFGK	2	EMPNVFGK2	42942.8	39685.7	40940
O70593	O70593	SGTA_RAT	Sgta	Small glutamine-rich tetratricopeptide repeat-containing protein alpha	1	EMPQDPR	EMPQDPR	2	EMPQDPR2	146413	139417	141986
Q8R3Z7	Q8R3Z7	Q8R3Z7_RAT	Ehd4	EH-domain containing 4	1	EMPSMFGK	EMPSMFGK	2	EMPSMFGK2	67841.2	64446	74623.9
Q8R491	Q8R491;Q4V8H8	EHD3_RAT	Ehd3	EH domain-containing protein 3	0	EMPSVFGK	EMPSVFGK	1	EMPSVFGK1	5956.39	3105.4	5436.88
Q8R491	Q8R491;Q4V8H8	EHD3_RAT	Ehd3	EH domain-containing protein 3	0	EMPSVFGK	EMPSVFGK	2	EMPSVFGK2	495200	428461	439540
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	EMPVQFQVVELPSGHHLCK	EMPVQFQVVELPSGHHLC(UniMod:4)K	3	EMPVQFQVVELPSGHHLC(UniMod:4)K3	13806.5	15790.7	12541.3
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	EMPVQFQVVELPSGHHLCK	EMPVQFQVVELPSGHHLC(UniMod:4)K	4	EMPVQFQVVELPSGHHLC(UniMod:4)K4	46785.1	40936.5	51831.3
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	EMQCAGTSDGSIDACK	EMQC(UniMod:4)AGTSDGSIDAC(UniMod:4)K	2	EMQC(UniMod:4)AGTSDGSIDAC(UniMod:4)K2	266185	245080	189805
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	EMQCAGTSDGSIDACK	EMQC(UniMod:4)AGTSDGSIDAC(UniMod:4)K	3	EMQC(UniMod:4)AGTSDGSIDAC(UniMod:4)K3	9049.72	10594.1	11862.7
D3ZM39	D3ZM39	D3ZM39_RAT	Dsg1	Desmoglein 1	1	EMQDLGGGER	EMQDLGGGER	2	EMQDLGGGER2	26850.1	11960.8	21676.5
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	EMQDLSEFCSDKPK	EMQDLSEFC(UniMod:4)SDKPK	2	EMQDLSEFC(UniMod:4)SDKPK2	3738.39	3704.77	4728.9
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	EMQDLSEFCSDKPK	EMQDLSEFC(UniMod:4)SDKPK	3	EMQDLSEFC(UniMod:4)SDKPK3	42739.7	58651.8	54344.9
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	EMQDVQGALQCYTR	EMQDVQGALQC(UniMod:4)YTR	2	EMQDVQGALQC(UniMod:4)YTR2	8336.05	8753.53	6907.97
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	EMQHWIMEK	EMQHWIMEK	2	EMQHWIMEK2	8581.42	8205.54	6272.4
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	EMQHWIMEK	EMQHWIMEK	3	EMQHWIMEK3	75062.2	111602	108700
A0A0G2K350	A0A0G2K350	A0A0G2K350_RAT	Napg	NSF attachment protein gamma	1	EMQKLPEAVQLIEK	EMQKLPEAVQLIEK	3	EMQKLPEAVQLIEK3	9355.28	14578.9	14810
P56603	P56603	SCAM1_RAT	Scamp1	Secretory carrier-associated membrane protein 1	1	EMQNLSQHGR	EMQNLSQHGR	2	EMQNLSQHGR2	27550.6	22900.6	23989.1
P56603	P56603	SCAM1_RAT	Scamp1	Secretory carrier-associated membrane protein 1	1	EMQNLSQHGR	EMQNLSQHGR	3	EMQNLSQHGR3	308158	278551	265092
P63102	P35213;P63102;P68255	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	0	EMQPTHPIR	EMQPTHPIR	2	EMQPTHPIR2	1.32735e+06	1.1271e+06	1.16754e+06
P63102	P35213;P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	0	EMQPTHPIRLGLALNFSVFYYEILNSPEK	EMQPTHPIRLGLALNFSVFYYEILNSPEK	4	EMQPTHPIRLGLALNFSVFYYEILNSPEK4	27518.3	37797.7	26364.9
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	EMQYFMQQWTGTNK	EMQYFMQQWTGTNK	2	EMQYFMQQWTGTNK2		1097.31	1935.42
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	EMRDELHVR	EMRDELHVR	3	EMRDELHVR3	23953.6	28621.9	14571.6
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	EMSDLSK	EMSDLSK	2	EMSDLSK2	28874	40239.2	31579.1
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	EMSGDLEQGMLAVVK	EMSGDLEQGMLAVVK	2	EMSGDLEQGMLAVVK2	22056.4	35760.1	28774.3
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	EMSGSEASDVPVK	EMSGSEASDVPVK	2	EMSGSEASDVPVK2	44645.6	52360.8	46553.2
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	EMSGSEASDVPVK	EMSGSEASDVPVK	3	EMSGSEASDVPVK3	148508	175287	191568
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	EMSGSEASDVPVKVSATLLSGSDSK	EMSGSEASDVPVKVSATLLSGSDSK	3	EMSGSEASDVPVKVSATLLSGSDSK3	84360.5	82889.1	60198.1
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	EMSIDQAK	EMSIDQAK	2	EMSIDQAK2	46570.2	42066.9	47643.9
P29288	P29288	PPA5_RAT	Acp5	Tartrate-resistant acid phosphatase type 5	1	EMSITYVEASGK	EMSITYVEASGK	2	EMSITYVEASGK2	3411.05	3025.09	4336.63
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	EMSNINHPDIR	EMSNINHPDIR	3	EMSNINHPDIR3	20559.5	21566.1	13524.1
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	EMSPALVYPFMR	EMSPALVYPFMR	2	EMSPALVYPFMR2	11930.1	16594.7	11021.3
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	EMSQEESTR	EMSQEESTR	2	EMSQEESTR2			10076.2
D3ZR63	D3ZR63	D3ZR63_RAT	Gfod1	Glucose-fructose oxidoreductase domain containing 1	1	EMSVPFYTSR	EMSVPFYTSR	2	EMSVPFYTSR2	12055.3	15434.6	9500.91
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	EMSVQEAYK	EMSVQEAYK	2	EMSVQEAYK2	6752.93	4097.71	2040.29
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	EMTEALGPGTIR	EMTEALGPGTIR	2	EMTEALGPGTIR2	294115	270341	270526
Q9QYF3	Q9QYF3	MYO5A_RAT	Myo5a	Unconventional myosin-Va	1	EMTETMER	EMTETMER	2	EMTETMER2		3370.28	
Q5FVL8	Q5FVL8	Q5FVL8_RAT	Abcb10	ATP binding cassette subfamily B member 10	1	EMTEVEK	EMTEVEK	2	EMTEVEK2	16773.4	23460.1	16994.2
Q6AXS5	Q6AXS5	SERB1_RAT	Serbp1	SERPINE1 mRNA-binding protein 1	1	EMTLDEWK	EMTLDEWK	2	EMTLDEWK2	27872.1	29334.8	25140
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	EMTLLSPCLHMLPHLHFGLK	EMTLLSPC(UniMod:4)LHMLPHLHFGLK	4	EMTLLSPC(UniMod:4)LHMLPHLHFGLK4	5869.1	1476.31	4568.24
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	EMTNSCLK	EMTNSC(UniMod:4)LK	2	EMTNSC(UniMod:4)LK2	69361.8	58033.9	88227.9
D4A731	D4A731	D4A731_RAT	Ankib1	RBR-type E3 ubiquitin transferase	1	EMTVEAEK	EMTVEAEK	2	EMTVEAEK2	16257.8	16655	17967.7
P13264	P13264	GLSK_RAT	Gls	Glutaminase kidney isoform, mitochondrial	1	EMVAAGDNK	EMVAAGDNK	2	EMVAAGDNK2		39489.1	
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	EMVANWR	EMVANWR	2	EMVANWR2	25952	25139.1	25227
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	EMVASSQEMGQDFDHVTMLR	EMVASSQEMGQDFDHVTMLR	3	EMVASSQEMGQDFDHVTMLR3	44847.2	44361.2	70924.6
P20069	P20069	MPPA_RAT	Pmpca	Mitochondrial-processing peptidase subunit alpha	1	EMVEIITK	EMVEIITK	2	EMVEIITK2	16900.6	18445.7	15000.8
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	EMVELPLR	EMVELPLR	2	EMVELPLR2	2.53302e+06	2.39958e+06	2.57475e+06
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	EMVELPLRHPALFK	EMVELPLRHPALFK	3	EMVELPLRHPALFK3	23476.4	46064.5	52599.3
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	EMVELPLRHPALFK	EMVELPLRHPALFK	4	EMVELPLRHPALFK4	66679	119220	106352
P0C0A2	P0C0A2	VPS36_RAT	Vps36	Vacuolar protein-sorting-associated protein 36	1	EMVELSK	EMVELSK	2	EMVELSK2	8878.99	10131.9	5360.08
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	EMVFDDTNLK	EMVFDDTNLK	2	EMVFDDTNLK2	119221	122075	127539
B2GUX8	B2GUX8	B2GUX8_RAT	Sh3bp5l	SH3 domain-binding protein 5	1	EMVFVAEQGVMADK	EMVFVAEQGVMADK	2	EMVFVAEQGVMADK2	14357.6	8643.6	8554.92
A0A8I6AT07	A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	1	EMVIFFGHPR	EMVIFFGHPR	3	EMVIFFGHPR3	22803.8	20000.1	23783.8
A0A8I5ZP57	A0A8I5ZP57	A0A8I5ZP57_RAT	Pkdcc	Protein kinase domain containing, cytoplasmic	1	EMVLLER	EMVLLER	2	EMVLLER2	205060	219501	196076
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	EMVPNVPQEALEK	EMVPNVPQEALEK	2	EMVPNVPQEALEK2	19154	15581.8	17317.2
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	EMVQNLMVLR	EMVQNLMVLR	2	EMVQNLMVLR2	92760.7	71959.4	88716.1
Q4G074	Q4G074	KBP_RAT	Kifbp	KIF-binding protein	1	EMVSLLPTK	EMVSLLPTK	2	EMVSLLPTK2	4689.15	4913.88	5802.27
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	EMVSQYLHTSK	EMVSQYLHTSK	2	EMVSQYLHTSK2	11668.6	8444.78	7416.9
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	EMVSQYLHTSK	EMVSQYLHTSK	3	EMVSQYLHTSK3	93625.6	90082.2	88189.4
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	EMVVPVTK	EMVVPVTK	1	EMVVPVTK1	4104.82	2448.89	
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	EMVVPVTK	EMVVPVTK	2	EMVVPVTK2	524468	551820	568763
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	EMVYCLEQGLIYR	EMVYC(UniMod:4)LEQGLIYR	2	EMVYC(UniMod:4)LEQGLIYR2			1418.4
Q9R0K8	Q9R0K8	STC2_RAT	Stc2	Stanniocalcin-2	1	EMVYQLQR	EMVYQLQR	2	EMVYQLQR2	42744.7	40153.2	58461.6
P10760	P10760	SAHH_RAT	Ahcy	Adenosylhomocysteinase	1	EMYSASKPLK	EMYSASKPLK	2	EMYSASKPLK2	1167.07	1729.76	
P10760	P10760	SAHH_RAT	Ahcy	Adenosylhomocysteinase	1	EMYSASKPLK	EMYSASKPLK	3	EMYSASKPLK3	10303	2775.87	8329.12
B2GV73	B2GV73	B2GV73_RAT	Arpc3	Actin-related protein 2/3 complex subunit 3	1	EMYTLGITNFPIPGEPGFPLNAIYAK	EMYTLGITNFPIPGEPGFPLNAIYAK	3	EMYTLGITNFPIPGEPGFPLNAIYAK3	36558.3	41632.6	14039.5
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	ENAAAALVALACAR	ENAAAALVALAC(UniMod:4)AR	2	ENAAAALVALAC(UniMod:4)AR2	3155.31		2706.78
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ENAAYFQFFSDAR	ENAAYFQFFSDAR	2	ENAAYFQFFSDAR2	11590	11991.8	4010.17
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	ENAEVDGDDDAEEMEAK	ENAEVDGDDDAEEMEAK	2	ENAEVDGDDDAEEMEAK2	36914.6	34269.6	34525.1
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	ENAHEATYIQR	ENAHEATYIQR	3	ENAHEATYIQR3	17470.4	10750.8	16920.3
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	ENAIVVHPDFR	ENAIVVHPDFR	3	ENAIVVHPDFR3	28490.8	21824.9	20703.2
Q924S1	Q924S1	PLCD_RAT	Agpat4	1-acyl-sn-glycerol-3-phosphate acyltransferase delta	1	ENAIVVLNHK	ENAIVVLNHK	2	ENAIVVLNHK2	2844.45	4801.39	2114.85
P04692	P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	1	ENALDRAEQAEADK	ENALDRAEQAEADK	3	ENALDRAEQAEADK3	31648.3	59729.3	50875.8
P04692	P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	1	ENALDRAEQAEADKK	ENALDRAEQAEADKK	3	ENALDRAEQAEADKK3	7565.6	8147.59	9291.11
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	ENALHELDVPFK	ENALHELDVPFK	3	ENALHELDVPFK3	26134.7	24208.6	32570.5
Q5PQL2	Q5PQL2	CNOT9_RAT	Cnot9	CCR4-NOT transcription complex subunit 9	1	ENALLELSK	ENALLELSK	2	ENALLELSK2	6107.57	6830.82	3295.49
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	ENALQDSVLAR	ENALQDSVLAR	2	ENALQDSVLAR2	213121	201557	206448
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	ENALSELDVPFK	ENALSELDVPFK	2	ENALSELDVPFK2	47977.8	42618.2	43031.7
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	ENAMECLR	ENAMEC(UniMod:4)LR	2	ENAMEC(UniMod:4)LR2	384649	397751	367296
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	ENAPAIIFIDEIDAIATK	ENAPAIIFIDEIDAIATK	2	ENAPAIIFIDEIDAIATK2	9581.37	6672.37	
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	ENAPAIIFIDEIDAIATKR	ENAPAIIFIDEIDAIATKR	3	ENAPAIIFIDEIDAIATKR3	6166.9		15064.6
P35286	P35286	RAB13_RAT	Rab13	Ras-related protein Rab-13	1	ENASAGVER	ENASAGVER	2	ENASAGVER2	17428.5		60621.3
A0A0G2KA92	A0A0G2KA92	A0A0G2KA92_RAT	Chd2	DNA helicase	1	ENASEGK	ENASEGK	1	ENASEGK1	5375.04	8023.26	3211.91
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	ENAVLAEK	ENAVLAEK	2	ENAVLAEK2	39213.1	48530.3	33538.6
P62501	P62501	T22D1_RAT	Tsc22d1	TSC22 domain family protein 1	1	ENAVPGPEGVAINK	ENAVPGPEGVAINK	2	ENAVPGPEGVAINK2	23913.5	19553.4	20657.5
A0A8I5ZX76	A0A8I5ZX76	A0A8I5ZX76_RAT	Eif3k	Eukaryotic translation initiation factor 3 subunit K	1	ENAYDLEANLAVLK	ENAYDLEANLAVLK	2	ENAYDLEANLAVLK2	72212.7	73797.5	57932.1
A0A8I5ZX76	A0A8I5ZX76	A0A8I5ZX76_RAT	Eif3k	Eukaryotic translation initiation factor 3 subunit K	1	ENAYDLEANLAVLK	ENAYDLEANLAVLK	3	ENAYDLEANLAVLK3	2171.66	5369.6	3877.36
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	ENCEGFELHFWR	ENC(UniMod:4)EGFELHFWR	3	ENC(UniMod:4)EGFELHFWR3	17683.4	18053	19568.6
Q7TP21	Q7TP21	Q7TP21_RAT	Rpa1	Replication protein A subunit	1	ENCMYQACPTQDCNKK	ENC(UniMod:4)MYQAC(UniMod:4)PTQDC(UniMod:4)NKK	3	ENC(UniMod:4)MYQAC(UniMod:4)PTQDC(UniMod:4)NKK3	2108.03	3218.38	483.342
D4A0J7	D4A0J7	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	1	ENCSDNILGNMPDIR	ENC(UniMod:4)SDNILGNMPDIR	2	ENC(UniMod:4)SDNILGNMPDIR2	9695.38	11464.5	13164.1
D4A0J7	D4A0J7	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	1	ENCSDNILGNMPDIR	ENC(UniMod:4)SDNILGNMPDIR	3	ENC(UniMod:4)SDNILGNMPDIR3	9914.01	16002.2	4502.15
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	ENDACLVEVNLNNIK	ENDAC(UniMod:4)LVEVNLNNIK	2	ENDAC(UniMod:4)LVEVNLNNIK2	123108	95913.2	86744.1
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	ENDACLVEVNLNNIK	ENDAC(UniMod:4)LVEVNLNNIK	3	ENDAC(UniMod:4)LVEVNLNNIK3	10214.5	10924.1	13855.9
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	ENDAIQTR	ENDAIQTR	2	ENDAIQTR2	194585	192858	2323.08
Q9Z272	Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	1	ENDAVWLATQNHSTLVTER	ENDAVWLATQNHSTLVTER	3	ENDAVWLATQNHSTLVTER3	10852.7	12863.2	9603.57
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	ENDFALIIDGK	ENDFALIIDGK	2	ENDFALIIDGK2	18507	36812.9	9758.61
A0A8I5ZTA7	A0A8I5ZTA7	A0A8I5ZTA7_RAT	Lrp8	LDL receptor related protein 8	1	ENDFQCGDGTCILAIK	ENDFQC(UniMod:4)GDGTC(UniMod:4)ILAIK	2	ENDFQC(UniMod:4)GDGTC(UniMod:4)ILAIK2	4521.62	2456.49	3620.04
B5DFD1	B5DFD1	B5DFD1_RAT	Nudcd1	NudC domain-containing protein 1	1	ENDGLEISLIK	ENDGLEISLIK	2	ENDGLEISLIK2	4775.26	3268.83	
O88387	O88387	FGD4_RAT	Fgd4	FYVE, RhoGEF and PH domain-containing protein 4	1	ENDIPLEVSTAELGK	ENDIPLEVSTAELGK	2	ENDIPLEVSTAELGK2	5223.11	3743.4	8352.13
P62494	P62494	RB11A_RAT	Rab11a	Ras-related protein Rab-11A	1	ENDMSPSNNVVPIHVPPTTENKPK	ENDMSPSNNVVPIHVPPTTENKPK	4	ENDMSPSNNVVPIHVPPTTENKPK4		5682.57	
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	ENDPSVMR	ENDPSVMR	2	ENDPSVMR2		4527.79	
Q9JM80	Q9JM80	PHAG1_RAT	Pag1	Phosphoprotein associated with glycosphingolipid-enriched microdomains 1	1	ENDYESIGDLQQGR	ENDYESIGDLQQGR	2	ENDYESIGDLQQGR2	4519.5	6368.2	5498.27
Q9Z0V5	Q9Z0V5	PRDX4_RAT	Prdx4	Peroxiredoxin-4	1	ENECHFYAGGQVYPGEVSR	ENEC(UniMod:4)HFYAGGQVYPGEVSR	3	ENEC(UniMod:4)HFYAGGQVYPGEVSR3	67790.5	67675.9	78093
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	ENEEAEPSPVPGTPTLR	ENEEAEPSPVPGTPTLR	2	ENEEAEPSPVPGTPTLR2	4052.53		
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	ENEEELER	ENEEELER	2	ENEEELER2	20908.1	10265.8	7000.49
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	ENEGTYYGPDGR	ENEGTYYGPDGR	2	ENEGTYYGPDGR2	17458.3	5857.34	23364.4
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	ENEHLYTFEK	ENEHLYTFEK	2	ENEHLYTFEK2	1614.22		1615.95
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	ENEHLYTFEK	ENEHLYTFEK	3	ENEHLYTFEK3	22261.2	18978.2	25376.4
D3ZJF9	D3ZJF9	D3ZJF9_RAT	Gla	Alpha-galactosidase	1	ENEIEVWERPLSNLAWAVAVR	ENEIEVWERPLSNLAWAVAVR	3	ENEIEVWERPLSNLAWAVAVR3	3589.3	4443.8	
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	ENELIISFLR	ENELIISFLR	2	ENELIISFLR2	30385.7	34086.9	20782.1
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	ENENIAAR	ENENIAAR	2	ENENIAAR2		48153.5	
D4A0J7	D4A0J7	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	1	ENEQIKEDVEEIR	ENEQIKEDVEEIR	3	ENEQIKEDVEEIR3		4097.79	4718.56
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	ENETDTGEAGVSLR	ENETDTGEAGVSLR	2	ENETDTGEAGVSLR2	14835.3	13195	14899.4
Q6AXS5	Q6AXS5	SERB1_RAT	Serbp1	SERPINE1 mRNA-binding protein 1	1	ENEVEEVK	ENEVEEVK	2	ENEVEEVK2	15677	5803.95	5989.08
Q6AXS5	Q6AXS5	SERB1_RAT	Serbp1	SERPINE1 mRNA-binding protein 1	1	ENEVEEVKEEGPK	ENEVEEVKEEGPK	3	ENEVEEVKEEGPK3	25551.8	19300.5	10292.2
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	ENEVLEAWK	ENEVLEAWK	2	ENEVLEAWK2	115455	95379.5	96849
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	ENEVQSLHSK	ENEVQSLHSK	3	ENEVQSLHSK3		9004.39	5426.33
P18292	P18292	THRB_RAT	F2	Prothrombin	1	ENFCRNPDSSTSGPWCYTTDPTVR	ENFC(UniMod:4)RNPDSSTSGPWC(UniMod:4)YTTDPTVR	3	ENFC(UniMod:4)RNPDSSTSGPWC(UniMod:4)YTTDPTVR3	19389.4	13659.6	17608.8
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	ENFDPLQHLEATPMAQTSGASVSGK	ENFDPLQHLEATPMAQTSGASVSGK	3	ENFDPLQHLEATPMAQTSGASVSGK3	55221.3	55536.3	75709.8
Q7TQ20	Q7TQ20	DNJC2_RAT	Dnajc2	DnaJ homolog subfamily C member 2	1	ENFFQVFSPVFER	ENFFQVFSPVFER	2	ENFFQVFSPVFER2		3434.75	5039.92
D3ZTN1	D3ZTN1	D3ZTN1_RAT	Tesc	Tescalcin	1	ENFNNVPDLELNPIR	ENFNNVPDLELNPIR	2	ENFNNVPDLELNPIR2	62554.5	54849.9	65557.4
D3ZTN1	D3ZTN1	D3ZTN1_RAT	Tesc	Tescalcin	1	ENFNNVPDLELNPIR	ENFNNVPDLELNPIR	3	ENFNNVPDLELNPIR3	7500.37	7256.3	7692.93
Q5XFX0	Q5XFX0	TAGL2_RAT	Tagln2	Transgelin-2	1	ENFQNWLK	ENFQNWLK	2	ENFQNWLK2	296320	319459	325547
O88989	O88989	MDHC_RAT	Mdh1	Malate dehydrogenase, cytoplasmic	1	ENFSCLTR	ENFSC(UniMod:4)LTR	2	ENFSC(UniMod:4)LTR2	84584.5	84073.5	39500.2
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	ENFSSISLR	ENFSSISLR	2	ENFSSISLR2	34332.2	40851.9	45710.2
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	ENFSVPVGLR	ENFSVPVGLR	2	ENFSVPVGLR2	24326.8	31250.1	26359.6
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	ENGAFTVLVDHYVK	ENGAFTVLVDHYVK	3	ENGAFTVLVDHYVK3	3657.25	1841.79	3111.04
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	ENGCFQQSGSLLNNAMK	ENGC(UniMod:4)FQQSGSLLNNAMK	2	ENGC(UniMod:4)FQQSGSLLNNAMK2	214739	179897	140874
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	ENGCFQQSGSLLNNAMK	ENGC(UniMod:4)FQQSGSLLNNAMK	3	ENGC(UniMod:4)FQQSGSLLNNAMK3	135325	107339	98721.6
Q9QYP2	Q9QYP2	CELR2_RAT	Celsr2	Cadherin EGF LAG seven-pass G-type receptor 2 (Fragment)	1	ENGDALTREGSLGPLPGPSTQPHK	ENGDALTREGSLGPLPGPSTQPHK	4	ENGDALTREGSLGPLPGPSTQPHK4	15470.9	19847.8	7901.41
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	ENGFGLAECCR	ENGFGLAEC(UniMod:4)C(UniMod:4)R	2	ENGFGLAEC(UniMod:4)C(UniMod:4)R2	21391.5	19409.4	16225.8
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	ENGFHGLVAYDSDYALCNIPYYFSAHALK	ENGFHGLVAYDSDYALC(UniMod:4)NIPYYFSAHALK	4	ENGFHGLVAYDSDYALC(UniMod:4)NIPYYFSAHALK4	6478.14	5373.45	11567.3
Q4V8K5	Q4V8K5	BROX_RAT	Brox	BRO1 domain-containing protein BROX	1	ENGFIYFQK	ENGFIYFQK	2	ENGFIYFQK2	7344.09	8979.23	4334.84
Q63481	Q63481	RAB7L_RAT	Rab29	Ras-related protein Rab-7L1	1	ENGFTGWTETSVK	ENGFTGWTETSVK	2	ENGFTGWTETSVK2	3691.88	11222	10455.6
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	ENGLEVLQEAFSR	ENGLEVLQEAFSR	3	ENGLEVLQEAFSR3	2516.29		1372.02
D3ZPV8	D3ZPV8	D3ZPV8_RAT	Ggct	Gamma-glutamyl cyclotransferase	1	ENGLPLEYQEK	ENGLPLEYQEK	2	ENGLPLEYQEK2	8171.73		
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	ENGNYIMYAR	ENGNYIMYAR	2	ENGNYIMYAR2	30214.3	32227.5	37577.6
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	ENGQGWTVLHEAVSTGDPEMVYTVLQHR	ENGQGWTVLHEAVSTGDPEMVYTVLQHR	4	ENGQGWTVLHEAVSTGDPEMVYTVLQHR4	9686.23	7440.73	6112.77
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	ENGQMAVSSGSVQGLLGVLR	ENGQMAVSSGSVQGLLGVLR	3	ENGQMAVSSGSVQGLLGVLR3	5519.05		4720.05
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	ENGTVTAANASTLNDGAAAVVLMTAEAAQR	ENGTVTAANASTLNDGAAAVVLMTAEAAQR	3	ENGTVTAANASTLNDGAAAVVLMTAEAAQR3	27729.5	57046.6	60542
A0A0G2K975	A0A0G2K975	A0A0G2K975_RAT	Cfhr4	Similar to complement factor H-related protein	1	ENGVTCHMGK	ENGVTC(UniMod:4)HMGK	2	ENGVTC(UniMod:4)HMGK2	2889.37	3789.45	2630.2
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	ENGVYLIDVK	ENGVYLIDVK	2	ENGVYLIDVK2	2.40678e+06	1.74113e+06	2.47785e+06
Q5PQR3	Q5PQR3	BTBD9_RAT	Btbd9	BTB/POZ domain-containing protein 9	1	ENHAEIMQAVR	ENHAEIMQAVR	3	ENHAEIMQAVR3		5710.75	7771.56
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	ENHNDLSGLK	ENHNDLSGLK	2	ENHNDLSGLK2	4081.07		1803.58
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	ENIAYGLTR	ENIAYGLTR	2	ENIAYGLTR2	112614	116188	80941.5
A0A8I5ZN24	A0A8I5ZN24	A0A8I5ZN24_RAT	Dhrs7	Dehydrogenase/reductase 7	1	ENIDQSYK	ENIDQSYK	2	ENIDQSYK2	63084.2	64804.2	66723.6
P09215	P09215	KPCD_RAT	Prkcd	Protein kinase C delta type	1	ENIFGENR	ENIFGENR	2	ENIFGENR2	44743	24768.6	17543.9
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	ENIGPELQR	ENIGPELQR	2	ENIGPELQR2	92507.5	95561.1	91554.3
P36876	P36876	2ABA_RAT	Ppp2r2a	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	1	ENIIAVATTNNLYIFQDK	ENIIAVATTNNLYIFQDK	3	ENIIAVATTNNLYIFQDK3	9157.08	4895.55	3482.93
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	ENILFGR	ENILFGR	2	ENILFGR2	33911.5	29178.8	33914.3
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	ENILFGRPLQEHCYK	ENILFGRPLQEHC(UniMod:4)YK	3	ENILFGRPLQEHC(UniMod:4)YK3	19657	8219.08	
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	ENILFGRPLQEHCYK	ENILFGRPLQEHC(UniMod:4)YK	4	ENILFGRPLQEHC(UniMod:4)YK4	20196.4	14202	22928.1
Q63483	Q63483	Q63483_RAT	Rab38	Ras-related protein Rab	1	ENINIDEASR	ENINIDEASR	2	ENINIDEASR2	118070	99751.5	120033
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	ENINQKPVVLR	ENINQKPVVLR	3	ENINQKPVVLR3	30621.8	31000.5	36627.5
Q2KJ09	Q2KJ09	UBP16_RAT	Usp16	Ubiquitin carboxyl-terminal hydrolase 16	1	ENIPLDSASQITVK	ENIPLDSASQITVK	2	ENIPLDSASQITVK2	12357.2	14112.7	4747.96
Q68FP9	Q68FP9	COG6_RAT	Cog6	Conserved oligomeric Golgi complex subunit 6	1	ENIQEVVGHITEGVCRPLK	ENIQEVVGHITEGVC(UniMod:4)RPLK	3	ENIQEVVGHITEGVC(UniMod:4)RPLK3	8744.4	8739	8757.82
Q68FP9	Q68FP9	COG6_RAT	Cog6	Conserved oligomeric Golgi complex subunit 6	1	ENIQEVVGHITEGVCRPLK	ENIQEVVGHITEGVC(UniMod:4)RPLK	4	ENIQEVVGHITEGVC(UniMod:4)RPLK4	4793.4	5004	8678.29
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	ENIQHFQAEEEANLLR	ENIQHFQAEEEANLLR	3	ENIQHFQAEEEANLLR3	4030.76	3449.38	1937.46
F1M798	D3Z8U5;F1M280;F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	0	ENIQPGQEYNFLK	ENIQPGQEYNFLK	2	ENIQPGQEYNFLK2	48250.7	48823.1	45175.6
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	ENIRQEISIMNCLHHPK	ENIRQEISIMNC(UniMod:4)LHHPK	4	ENIRQEISIMNC(UniMod:4)LHHPK4	56403.2	66595	50940.6
G3V6G1	G3V6G1	G3V6G1_RAT	Jchain	Joining chain of multimeric IgA and IgM	1	ENISDPTSPVR	ENISDPTSPVR	2	ENISDPTSPVR2	56532	28801.8	54932.6
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	ENISLLEK	ENISLLEK	2	ENISLLEK2	23810.2	24453.5	21855
A0A8I6GK59	A0A8I6GK59	A0A8I6GK59_RAT	Bmp2k	BMP-2 inducible kinase	1	ENISVALTDGKDR	ENISVALTDGKDR	3	ENISVALTDGKDR3	3450.99	10153.4	4940.44
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	ENITAEALELSLK	ENITAEALELSLK	2	ENITAEALELSLK2	401837	353757	348005
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	ENITAEALELSLK	ENITAEALELSLK	3	ENITAEALELSLK3	66737.8	65416.4	52320.1
Q4V8K5	Q4V8K5	BROX_RAT	Brox	BRO1 domain-containing protein BROX	1	ENITEDEAK	ENITEDEAK	2	ENITEDEAK2	17879	13920	14518.6
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	ENIVEAIIHSPELIR	ENIVEAIIHSPELIR	2	ENIVEAIIHSPELIR2	2100.54	6319.58	3499.62
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	ENIVEAIIHSPELIR	ENIVEAIIHSPELIR	3	ENIVEAIIHSPELIR3	19365	20275.5	22286.2
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	ENIVGDAMEVLR	ENIVGDAMEVLR	2	ENIVGDAMEVLR2	12871	5706.56	14512.1
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	ENIVGDAMEVLRK	ENIVGDAMEVLRK	2	ENIVGDAMEVLRK2	6494.11	3081.9	
D4A7H1	D4A7H1	SL9A9_RAT	Slc9a9	Sodium/hydrogen exchanger 9	1	ENIYEGDLGLGGYELK	ENIYEGDLGLGGYELK	2	ENIYEGDLGLGGYELK2	25226.2	28084.8	25050.5
A0A8I6GH80	A0A8I6GH80	A0A8I6GH80_RAT	Vps4b	vesicle-fusing ATPase	1	ENKPSIIFIDEIDSLCGSR	ENKPSIIFIDEIDSLC(UniMod:4)GSR	3	ENKPSIIFIDEIDSLC(UniMod:4)GSR3	10487.4	10437.8	18885.2
B2GV55	B2GV55;A0A8I6AE35	B2GV55_RAT	Ube2q1	Ubiquitin conjugating enzyme E2 Q1	0	ENLAILEK	ENLAILEK	2	ENLAILEK2	83159.2	74796.9	78909.2
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	ENLANIFR	ENLANIFR	2	ENLANIFR2	10921.6	17604.1	7379.73
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	ENLATVEGNFASIDAR	ENLATVEGNFASIDAR	2	ENLATVEGNFASIDAR2	48826.4	52320.9	40762.6
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	ENLATVEGNFASIDAR	ENLATVEGNFASIDAR	3	ENLATVEGNFASIDAR3	23914.9	23452.3	24581
P18292	P18292	THRB_RAT	F2	Prothrombin	1	ENLDRDIALLK	ENLDRDIALLK	2	ENLDRDIALLK2	3.8575e+06	4.2723e+06	4.16875e+06
P18292	P18292	THRB_RAT	F2	Prothrombin	1	ENLDRDIALLK	ENLDRDIALLK	3	ENLDRDIALLK3	95173.6	121195	117599
P18292	P18292	THRB_RAT	F2	Prothrombin	1	ENLDRDIALLKLK	ENLDRDIALLKLK	3	ENLDRDIALLKLK3	3674.99	2204.23	2786.7
D3ZE15	D3ZE15;A0A8I6A382;F1LZC5	D3ZE15_RAT	Ndufa13	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13	0	ENLEEEAIIMK	ENLEEEAIIMK	2	ENLEEEAIIMK2	64791.2	50249.9	48732.8
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ENLEQAFEVAER	ENLEQAFEVAER	2	ENLEQAFEVAER2	41387.1	38308.5	30595.6
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	ENLGQGIMVHK	ENLGQGIMVHK	2	ENLGQGIMVHK2	2523.93	3867.19	5084.95
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	ENLGQGIMVHK	ENLGQGIMVHK	3	ENLGQGIMVHK3	14754.5	8426.59	13620.3
A0A0U1RRS5	A0A0U1RRS5	A0A0U1RRS5_RAT	Smg7	Nonsense-mediated mRNA decay factor	1	ENLILQETSAIESHASDGSPGLK	ENLILQETSAIESHASDGSPGLK	3	ENLILQETSAIESHASDGSPGLK3	8549.64	11478.6	4585.74
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	ENLIYTYIGPVLVSVNPYR	ENLIYTYIGPVLVSVNPYR	3	ENLIYTYIGPVLVSVNPYR3	9051.08	10312.5	8162.33
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	ENLLEEQGSIALR	ENLLEEQGSIALR	2	ENLLEEQGSIALR2	96476.8	83721.8	72284.7
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	ENLLEEQGSIALR	ENLLEEQGSIALR	3	ENLLEEQGSIALR3	30273.5	25197.4	27994.3
P15651	P15651	ACADS_RAT	Acads	Short-chain specific acyl-CoA dehydrogenase, mitochondrial	1	ENLLGEPGMGFK	ENLLGEPGMGFK	2	ENLLGEPGMGFK2	35872.8	43881.5	49229.1
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	ENLLLSDSPPCR	ENLLLSDSPPC(UniMod:4)R	2	ENLLLSDSPPC(UniMod:4)R2	114380	137893	126890
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	ENLLLSDSPPCR	ENLLLSDSPPC(UniMod:4)R	3	ENLLLSDSPPC(UniMod:4)R3	7855.18	8800.42	11200.1
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	ENLLSLTCQHQFCR	ENLLSLTC(UniMod:4)QHQFC(UniMod:4)R	3	ENLLSLTC(UniMod:4)QHQFC(UniMod:4)R3	19710.4	24521.8	25447.1
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	ENLMSALDEARK	ENLMSALDEARK	3	ENLMSALDEARK3	38989.8	44994.3	54521.3
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	ENLMTPSNMGVIFGPTLMR	ENLMTPSNMGVIFGPTLMR	3	ENLMTPSNMGVIFGPTLMR3	19392.4	16810.9	27766.7
Q9QWG5	Q9QWG5	INP4B_RAT	Inpp4b	Type II inositol 3,4-bisphosphate 4-phosphatase	1	ENLPFMNAVLR	ENLPFMNAVLR	2	ENLPFMNAVLR2	12571.1	15241	18490.5
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	ENLPVLNTR	ENLPVLNTR	2	ENLPVLNTR2	230774	261303	207926
Q63184	Q63184	E2AK2_RAT	Eif2ak2	Interferon-induced, double-stranded RNA-activated protein kinase	1	ENLPVNFELCDPDSQLPHR	ENLPVNFELC(UniMod:4)DPDSQLPHR	3	ENLPVNFELC(UniMod:4)DPDSQLPHR3	16060.3		14626.1
Q80W57	Q80W57	ABCG2_RAT	Abcg2	Broad substrate specificity ATP-binding cassette transporter ABCG2	1	ENLQFSAALR	ENLQFSAALR	2	ENLQFSAALR2	7235.56	10417.3	10256.8
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	ENLQGLVTR	ENLQGLVTR	2	ENLQGLVTR2	123160	123521	125358
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	ENLQHTQAEEEAHLLTQQR	ENLQHTQAEEEAHLLTQQR	3	ENLQHTQAEEEAHLLTQQR3	14207.4	10462.1	5971.25
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	ENLQHTQAEEEAHLLTQQR	ENLQHTQAEEEAHLLTQQR	4	ENLQHTQAEEEAHLLTQQR4	20284.8	30498.2	25927.4
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	ENLSAAFSR	ENLSAAFSR	2	ENLSAAFSR2	366912	369306	356990
D3ZQI6	D3ZQI6	D3ZQI6_RAT	Xpo4	Exportin 4	1	ENLSAQMSSVFQR	ENLSAQMSSVFQR	2	ENLSAQMSSVFQR2	3485.24	3334.06	
D3ZJD8	D3ZJD8	D3ZJD8_RAT	Clec1b	C-type lectin domain family 1 member B	1	ENLSATLQQLAK	ENLSATLQQLAK	2	ENLSATLQQLAK2	270703	230519	212420
D3ZJD8	D3ZJD8	D3ZJD8_RAT	Clec1b	C-type lectin domain family 1 member B	1	ENLSATLQQLAK	ENLSATLQQLAK	3	ENLSATLQQLAK3		8518.4	7697.18
P08649	P08649	CO4_RAT	C4	Complement C4	1	ENLSCPK	ENLSC(UniMod:4)PK	1	ENLSC(UniMod:4)PK1	855.425	651664	683137
P08649	P08649	CO4_RAT	C4	Complement C4	1	ENLSCPK	ENLSC(UniMod:4)PK	2	ENLSC(UniMod:4)PK2	124161	190400	102122
P18292	P18292	THRB_RAT	F2	Prothrombin	1	ENLSPPLGECLLER	ENLSPPLGEC(UniMod:4)LLER	2	ENLSPPLGEC(UniMod:4)LLER2	1.17551e+08	1.31995e+08	1.33299e+08
P18292	P18292	THRB_RAT	F2	Prothrombin	1	ENLSPPLGECLLER	ENLSPPLGEC(UniMod:4)LLER	3	ENLSPPLGEC(UniMod:4)LLER3	1.071e+07	1.06216e+07	1.2629e+07
P18292	P18292	THRB_RAT	F2	Prothrombin	1	ENLSPPLGECLLERGR	ENLSPPLGEC(UniMod:4)LLERGR	3	ENLSPPLGEC(UniMod:4)LLERGR3	137431	162772	253276
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	ENLSYDLVPMK	ENLSYDLVPMK	2	ENLSYDLVPMK2	14638	9801.58	14410.3
P43527	P43527	CASP1_RAT	Casp1	Caspase-1	1	ENLTALEMTK	ENLTALEMTK	2	ENLTALEMTK2		3670.45	
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	ENLVFLAQK	ENLVFLAQK	2	ENLVFLAQK2	112143	118800	122538
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	ENLWLNLTDGSILCGR	ENLWLNLTDGSILC(UniMod:4)GR	2	ENLWLNLTDGSILC(UniMod:4)GR2	32697.7	19986	23138.8
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	ENLWLNLTDGSILCGR	ENLWLNLTDGSILC(UniMod:4)GR	3	ENLWLNLTDGSILC(UniMod:4)GR3	37583.5	23832.1	21612.5
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	ENLWSASEDLLLR	ENLWSASEDLLLR	2	ENLWSASEDLLLR2	52276.9	59286.7	60940.5
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	ENLWSASEDLLLR	ENLWSASEDLLLR	3	ENLWSASEDLLLR3	1064.14	2687.4	3414.39
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	ENMASLQSNPQQQELFR	ENMASLQSNPQQQELFR	3	ENMASLQSNPQQQELFR3	10471.7	4399.11	3154.82
M0RA86	M0RA86	M0RA86_RAT	Ccdc9	Coiled-coil domain containing 9	1	ENMAVEEK	ENMAVEEK	2	ENMAVEEK2	26733.7	12107.1	24249.8
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	ENMLGDAK	ENMLGDAK	2	ENMLGDAK2	182791	178668	189996
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	ENMPSHFK	ENMPSHFK	2	ENMPSHFK2	126442	101240	91361.3
D4A748	D4A748	D4A748_RAT	Wdfy4	WDFY family member 4	1	ENMSDVR	ENMSDVR	2	ENMSDVR2	4790.09		
O88339	O88339	EPN1_RAT	Epn1	Epsin-1	1	ENMYAVQTLK	ENMYAVQTLK	2	ENMYAVQTLK2	26612.8	23618.5	31081.8
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	ENNADPDQEK	ENNADPDQEK	2	ENNADPDQEK2			2811.7
A0A8I6GHH3	A0A8I6GHH3	A0A8I6GHH3_RAT	Sh3bgrl	SH3 domain binding glutamate-rich protein like	1	ENNAVYAFLGLTAPPGSK	ENNAVYAFLGLTAPPGSK	2	ENNAVYAFLGLTAPPGSK2		5720.8	9774.56
A0A8I6GHH3	A0A8I6GHH3	A0A8I6GHH3_RAT	Sh3bgrl	SH3 domain binding glutamate-rich protein like	1	ENNAVYAFLGLTAPPGSK	ENNAVYAFLGLTAPPGSK	3	ENNAVYAFLGLTAPPGSK3	5254.08	6639.91	6288.29
A0A0G2JTX7	A0A0G2JTX7	A0A0G2JTX7_RAT	Col6a5	Collagen type VI alpha 5 chain	1	ENNCPVGAR	ENNC(UniMod:4)PVGAR	2	ENNC(UniMod:4)PVGAR2	4161.76	7403.57	8907.07
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	ENNELYLELMK	ENNELYLELMK	2	ENNELYLELMK2	2222.96		
Q80Z30	Q80Z30	PPM1E_RAT	Ppm1e	Protein phosphatase 1E	1	ENNGDSSMVAHK	ENNGDSSMVAHK	2	ENNGDSSMVAHK2			5504.91
Q80Z30	Q80Z30	PPM1E_RAT	Ppm1e	Protein phosphatase 1E	1	ENNGDSSMVAHK	ENNGDSSMVAHK	3	ENNGDSSMVAHK3			2015.86
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	ENNLSEEVLGK	ENNLSEEVLGK	2	ENNLSEEVLGK2	66185.5	59254	65615
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	ENNVNVSK	ENNVNVSK	2	ENNVNVSK2			52674
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	ENPAMQEK	ENPAMQEK	2	ENPAMQEK2	29027.7	36586.3	42560.3
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	ENPAVVDYELAPIIDLVR	ENPAVVDYELAPIIDLVR	3	ENPAVVDYELAPIIDLVR3	5513.34	6699.5	11138.6
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	ENPDIVNQSQQAQAR	ENPDIVNQSQQAQAR	2	ENPDIVNQSQQAQAR2	4267.99	2059.86	4169.8
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	ENPEQSR	ENPEQSR	2	ENPEQSR2			12084.2
D3ZTX4	D3ZTX4	D3ZTX4_RAT	Mgam	Maltase-glucoamylase	1	ENPFGIQIR	ENPFGIQIR	2	ENPFGIQIR2	12629.3	11343.5	4283.98
D3ZW49	D3ZW49	D3ZW49_RAT	Tmem9b	TMEM9 domain family, member B	1	ENPGHIYNK	ENPGHIYNK	2	ENPGHIYNK2	13795.5	15976.9	
Q6NX65	Q6NX65	PDC10_RAT	Pdcd10	Programmed cell death protein 10	1	ENPGLTQDIIMK	ENPGLTQDIIMK	2	ENPGLTQDIIMK2	210477	206674	194529
Q9JI03	Q9JI03	CO5A1_RAT	Col5a1	Collagen alpha-1(V) chain	1	ENPGSWFSEFK	ENPGSWFSEFK	2	ENPGSWFSEFK2	30418.5	34953.5	28133
Q9JI03	Q9JI03	CO5A1_RAT	Col5a1	Collagen alpha-1(V) chain	1	ENPGSWFSEFKR	ENPGSWFSEFKR	3	ENPGSWFSEFKR3	9102.87	3261.68	8811.79
Q66HC1	Q66HC1	TDRD3_RAT	Tdrd3	Tudor domain-containing protein 3	1	ENPHPSEFVDYNNQK	ENPHPSEFVDYNNQK	3	ENPHPSEFVDYNNQK3	6084.32	2300.13	3770.91
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	ENPLLPEEEEQR	ENPLLPEEEEQR	2	ENPLLPEEEEQR2	23639.6	27560	21294.1
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	ENPLVILPAQETER	ENPLVILPAQETER	2	ENPLVILPAQETER2	28657.9	27525.4	29499.2
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	ENPSATLEDLEKPGVDEEPQHVLLR	ENPSATLEDLEKPGVDEEPQHVLLR	3	ENPSATLEDLEKPGVDEEPQHVLLR3	2206.36	4404.84	2391.97
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	ENPSATLEDLEKPGVDEEPQHVLLR	ENPSATLEDLEKPGVDEEPQHVLLR	4	ENPSATLEDLEKPGVDEEPQHVLLR4	8411.74	13774.6	13269.2
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	ENPSDLQK	ENPSDLQK	2	ENPSDLQK2	101015	126390	120559
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	ENPSLVMPPKPADHTAEWYNIDFSLQNQLR	ENPSLVMPPKPADHTAEWYNIDFSLQNQLR	4	ENPSLVMPPKPADHTAEWYNIDFSLQNQLR4	30814.9	36957.5	29499.4
Q641Z2	Q641Z2	PTN9_RAT	Ptpn9	Tyrosine-protein phosphatase non-receptor type 9	1	ENPVGTFHCSMSPGNLEK	ENPVGTFHC(UniMod:4)SMSPGNLEK	3	ENPVGTFHC(UniMod:4)SMSPGNLEK3	4821.7	10408.6	12670.7
P09895	A0A8I6GKE4;A0A8I6AAE6;P09895	RL5_RAT	Rpl5	Large ribosomal subunit protein uL18	0	ENPVYEK	ENPVYEK	2	ENPVYEK2	48085.6	37877.9	46663.4
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	ENPYEDIPVQSFPIWR	ENPYEDIPVQSFPIWR	3	ENPYEDIPVQSFPIWR3	10572.3	9228.88	15713.9
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	ENPYYDSR	ENPYYDSR	2	ENPYYDSR2	1.23086e+06	1.28982e+06	1.36703e+06
Q4G002	Q4G002	Q4G002_RAT	RT1-T24-4	Histocompatibility 2, T region locus 24	1	ENPYYFDEETQVFTNR	ENPYYFDEETQVFTNR	3	ENPYYFDEETQVFTNR3	15605	9118.85	10579.6
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	ENQCVIISGESGAGK	ENQC(UniMod:4)VIISGESGAGK	2	ENQC(UniMod:4)VIISGESGAGK2	14544.1	8275.46	9848.71
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	ENQEDLGK	ENQEDLGK	1	ENQEDLGK1			492.337
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	ENQEDLGK	ENQEDLGK	2	ENQEDLGK2	62506.4		56724.5
Q5RK08	Q5RK08	Q5RK08_RAT	Nipsnap2	Glioblastoma amplified sequence	1	ENQEFVSFR	ENQEFVSFR	2	ENQEFVSFR2	32858.9	21789.2	15896.2
Q9ERE6	Q9ERE6	MPRIP_RAT	Mprip	Myosin phosphatase Rho-interacting protein	1	ENQELNAHNQELNNR	ENQELNAHNQELNNR	3	ENQELNAHNQELNNR3	2687.29	8800.49	
P21263	P21263	NEST_RAT	Nes	Nestin	1	ENQESLVSLK	ENQESLVSLK	2	ENQESLVSLK2	3939.3	2460.07	
P0DSP1	P0DSP1	SORL_RAT	Sorl1	Sortilin-related receptor	1	ENQEVILEEVR	ENQEVILEEVR	2	ENQEVILEEVR2	2516.35	2132.03	
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	ENQHNMEQR	ENQHNMEQR	2	ENQHNMEQR2			241216
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	ENQHNMEQR	ENQHNMEQR	3	ENQHNMEQR3			24726.2
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	ENQINSFGK	ENQINSFGK	2	ENQINSFGK2	75222.6	74947.1	72660.3
M0R8H5	M0R8H5	M0R8H5_RAT	Lrg1	Leucine-rich alpha-2-glycoprotein 1	1	ENQLQEASAR	ENQLQEASAR	2	ENQLQEASAR2	45443.3	29271.1	45550.9
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	ENQLQQEDPMDR	ENQLQQEDPMDR	2	ENQLQQEDPMDR2	6045.81	8714.2	6900.51
O35115	O35115	FHL2_RAT	Fhl2	Four and a half LIM domains protein 2	1	ENQNFCVPCYEK	ENQNFC(UniMod:4)VPC(UniMod:4)YEK	2	ENQNFC(UniMod:4)VPC(UniMod:4)YEK2	4920.67	5928.42	4718.81
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	ENQPTWK	ENQPTWK	1	ENQPTWK1	25845.9	30719.3	25144.7
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	ENQPTWK	ENQPTWK	2	ENQPTWK2	1.15049e+06	1.41025e+06	1.2565e+06
A0A8I6AGD6	A0A8I6AGD6	A0A8I6AGD6_RAT	Elapor2	Endosome-lysosome associated apoptosis and autophagy regulator family member 2	1	ENQSLHYDFRNLSSVGSLMNGPSFTSK	ENQSLHYDFRNLSSVGSLMNGPSFTSK	4	ENQSLHYDFRNLSSVGSLMNGPSFTSK4		2757.65	3574.84
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	ENQSLQIK	ENQSLQIK	2	ENQSLQIK2	18035.2	24975.8	13417.1
Q62639	Q62639	RHEB_RAT	Rheb	GTP-binding protein Rheb	1	ENQTAVDVFR	ENQTAVDVFR	2	ENQTAVDVFR2	131252	119137	142408
Q62639	Q62639	RHEB_RAT	Rheb	GTP-binding protein Rheb	1	ENQTAVDVFRR	ENQTAVDVFRR	3	ENQTAVDVFRR3	17661.7	15534.5	19573.4
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	ENQVFPLWDSTK	ENQVFPLWDSTK	2	ENQVFPLWDSTK2	19381.2	18266	20934.2
Q6PEC4	Q6PEC4	SKP1_RAT	Skp1	S-phase kinase-associated protein 1	1	ENQWCEEK	ENQWC(UniMod:4)EEK	2	ENQWC(UniMod:4)EEK2	185954	156382	181063
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	ENRFDPPIVAR	ENRFDPPIVAR	2	ENRFDPPIVAR2	708969	783003	631697
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	ENRFDPPIVAR	ENRFDPPIVAR	3	ENRFDPPIVAR3	6.26131e+06	7.59584e+06	8.0579e+06
P53565	P53565;A0A8I5ZR58	CUX1_RAT	Cux1	Homeobox protein cut-like 1	0	ENSASQISQLEQQLNAK	ENSASQISQLEQQLNAK	3	ENSASQISQLEQQLNAK3	2420.29	704.167	
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	ENSEILSGSWSEQLYSEGTQATYK	ENSEILSGSWSEQLYSEGTQATYK	3	ENSEILSGSWSEQLYSEGTQATYK3	40224.1	45505.3	31258
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	ENSHHWSWAVQWLQK	ENSHHWSWAVQWLQK	3	ENSHHWSWAVQWLQK3	7024.24	3133.8	
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	ENSHHWSWAVQWLQK	ENSHHWSWAVQWLQK	4	ENSHHWSWAVQWLQK4	6927.5	11634.3	2460.13
Q498R7	Q498R7	CZIB_RAT	Czib	CXXC motif containing zinc binding protein	1	ENSIEILSSTIK	ENSIEILSSTIK	2	ENSIEILSSTIK2	8704.94	6148.69	
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	ENSIWDEK	ENSIWDEK	2	ENSIWDEK2	59528.7	59457.6	53797.4
Q497B0	Q497B0	NIT2_RAT	Nit2	Omega-amidase NIT2	1	ENSIYLIGGSIPEEDDGK	ENSIYLIGGSIPEEDDGK	2	ENSIYLIGGSIPEEDDGK2	7666.69	5026.59	9884.01
A0A8I6GBE0	A0A8I6GBE0	A0A8I6GBE0_RAT	Dpp9	Dipeptidyl peptidase 9	1	ENSLLYSEIPK	ENSLLYSEIPK	2	ENSLLYSEIPK2	5513.49	4767.87	2451.97
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	ENSLYHPVLDIPQVRPK	ENSLYHPVLDIPQVRPK	4	ENSLYHPVLDIPQVRPK4	8407.63	7595.65	8977.59
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	ENSQMDDKWEK	ENSQMDDKWEK	3	ENSQMDDKWEK3	3850.89		5633.87
P08650	P08650	CO5_RAT	C5	Complement C5	1	ENSQYLPIK	ENSQYLPIK	2	ENSQYLPIK2	316041	216705	225974
Q6J1Y9	Q6J1Y9	UBP19_RAT	Usp19	Ubiquitin carboxyl-terminal hydrolase 19	1	ENSSASEVLESLSQSVHVKPESLR	ENSSASEVLESLSQSVHVKPESLR	4	ENSSASEVLESLSQSVHVKPESLR4	11752.9	8394.59	5899.32
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	ENSSESFISR	ENSSESFISR	2	ENSSESFISR2	33592	39727.4	25703.3
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	ENSSEVVQPFLMGCGTK	ENSSEVVQPFLMGC(UniMod:4)GTK	2	ENSSEVVQPFLMGC(UniMod:4)GTK2	4420.09	5489.61	5358.19
B0BNE3	B0BNE3	B0BNE3_RAT	Trappc5	Trafficking protein particle complex subunit 5	1	ENSTLNCASFTAGIVEAVLTHSGFPAK	ENSTLNC(UniMod:4)ASFTAGIVEAVLTHSGFPAK	3	ENSTLNC(UniMod:4)ASFTAGIVEAVLTHSGFPAK3	11627.2	4888.07	10825.1
B1WBY5	B1WBY5	B1WBY5_RAT	Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	1	ENTASDILQK	ENTASDILQK	2	ENTASDILQK2	2750.21	5367.61	4349.22
D3ZX06	D3ZX06	D3ZX06_RAT	Ghdc	GH3 domain containing	1	ENTDMTTFR	ENTDMTTFR	2	ENTDMTTFR2	7279.81	4814.2	7457.49
Q99NA5	Q99NA5	IDH3A_RAT	Idh3a	Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial	1	ENTEGEYSGIEHVIVDGVVQSIK	ENTEGEYSGIEHVIVDGVVQSIK	3	ENTEGEYSGIEHVIVDGVVQSIK3	70146.4	90894.5	70838.8
P41565	P41565	IDHG1_RAT	Idh3g	Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial	1	ENTEGEYSSLEHESVAGVVESLK	ENTEGEYSSLEHESVAGVVESLK	3	ENTEGEYSSLEHESVAGVVESLK3	35920.5	34473.4	29512.7
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	ENTELTQPLR	ENTELTQPLR	2	ENTELTQPLR2	7674.02	14026	13565.8
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	ENTELTQPLRK	ENTELTQPLRK	3	ENTELTQPLRK3	10054.6	15383.9	19405.3
D3ZHQ1	D3ZHQ1	D3ZHQ1_RAT	Dpp8	Dipeptidylpeptidase 8	1	ENTLFYSEIPK	ENTLFYSEIPK	2	ENTLFYSEIPK2	19495.4	23926.9	19737.3
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	ENTLHGYGTQK	ENTLHGYGTQK	2	ENTLHGYGTQK2	1783.01		4297.89
Q02253	Q02253	MMSA_RAT	Aldh6a1	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial	1	ENTLNQLVGAAFGAAGQR	ENTLNQLVGAAFGAAGQR	2	ENTLNQLVGAAFGAAGQR2	9954.31	12236.4	14516.4
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	ENTNEIYSGK	ENTNEIYSGK	2	ENTNEIYSGK2	145389	131726	159432
P61980	P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	ENTQTTIK	ENTQTTIK	1	ENTQTTIK1	812.841		
P61980	P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	ENTQTTIK	ENTQTTIK	2	ENTQTTIK2	84677.6	89223.6	60985.2
P20069	P20069	MPPA_RAT	Pmpca	Mitochondrial-processing peptidase subunit alpha	1	ENTVGLHR	ENTVGLHR	2	ENTVGLHR2	19426.8	4233.94	
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	ENTVTNDWIPEGEEDDDYLDLEK	ENTVTNDWIPEGEEDDDYLDLEK	3	ENTVTNDWIPEGEEDDDYLDLEK3	38863	35456	
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	ENVAPACLPQK	ENVAPAC(UniMod:4)LPQK	2	ENVAPAC(UniMod:4)LPQK2	27123.5	35320	4.91587e+07
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	ENVAPACLPQK	ENVAPAC(UniMod:4)LPQK	3	ENVAPAC(UniMod:4)LPQK3	192282	164364	207580
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	ENVAPACLPQKDWAEATLMTQK	ENVAPAC(UniMod:4)LPQKDWAEATLMTQK	3	ENVAPAC(UniMod:4)LPQKDWAEATLMTQK3	33118.9	29289.4	39192.8
Q9QYP2	Q9QYP2	CELR2_RAT	Celsr2	Cadherin EGF LAG seven-pass G-type receptor 2 (Fragment)	1	ENVAQYILR	ENVAQYILR	2	ENVAQYILR2	8528.17	6076.91	
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	ENVDQEALLNYAR	ENVDQEALLNYAR	2	ENVDQEALLNYAR2	7727.7	4821.7	4938.91
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	ENVDSLIQELR	ENVDSLIQELR	2	ENVDSLIQELR2	8625.96	17857.2	7587.83
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	ENVEGEDCSHCK	ENVEGEDC(UniMod:4)SHC(UniMod:4)K	3	ENVEGEDC(UniMod:4)SHC(UniMod:4)K3			15971.7
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	ENVFENNR	ENVFENNR	2	ENVFENNR2	53545.6	56139.7	45116.4
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	ENVFQEHQTLK	ENVFQEHQTLK	2	ENVFQEHQTLK2	28515.4	22789.5	27389.9
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	ENVFQEHQTLK	ENVFQEHQTLK	3	ENVFQEHQTLK3	205796	200863	225238
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	ENVIEYK	ENVIEYK	1	ENVIEYK1	1307.32		
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	ENVIEYK	ENVIEYK	2	ENVIEYK2	58406.4	64045.5	98227.6
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	ENVILQMR	ENVILQMR	2	ENVILQMR2	12541	7883.07	8571.81
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	ENVIMTQILPCIK	ENVIMTQILPC(UniMod:4)IK	2	ENVIMTQILPC(UniMod:4)IK2	160240	126261	126807
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	ENVIMTQILPCIK	ENVIMTQILPC(UniMod:4)IK	3	ENVIMTQILPC(UniMod:4)IK3	7441.63	5980.57	12051
D4A533	D4A533	D4A533_RAT	Tapt1	Transmembrane anterior posterior transformation 1	1	ENVIPLLVTSNSDQFLTTPDGDEK	ENVIPLLVTSNSDQFLTTPDGDEK	3	ENVIPLLVTSNSDQFLTTPDGDEK3	5662.52	9674.32	5710.06
Q5M7T7	Q5M7T7	Q5M7T7_RAT	Pla2g7	Phospholipase A2 group VII	1	ENVLGLPFDMK	ENVLGLPFDMK	2	ENVLGLPFDMK2	124518	143321	146291
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	ENVLIGEGAGFK	ENVLIGEGAGFK	2	ENVLIGEGAGFK2	85215.8	70599.6	91879
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	ENVLLSSELQR	ENVLLSSELQR	2	ENVLLSSELQR2	5947.82		9508.18
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	ENVNATENCISAVGK	ENVNATENC(UniMod:4)ISAVGK	2	ENVNATENC(UniMod:4)ISAVGK2	65924.4	66226.7	50498.9
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	ENVNLAQIR	ENVNLAQIR	2	ENVNLAQIR2	182953	191400	190184
D3ZJR7	D3ZJR7	D3ZJR7_RAT	Dsc2	Desmocollin 2	1	ENVPIGTR	ENVPIGTR	2	ENVPIGTR2	147137	111002	109216
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	ENVPPGPEACSIHQEGSK	ENVPPGPEAC(UniMod:4)SIHQEGSK	3	ENVPPGPEAC(UniMod:4)SIHQEGSK3	63327	49459.9	68217.1
D3ZQ80	D3ZQ80	D3ZQ80_RAT	Smg8	Nonsense-mediated mRNA decay factor SMG8	1	ENVQLMSYK	ENVQLMSYK	2	ENVQLMSYK2	1939.03	6571.77	4790.52
Q5XI39	A0A8I6A215;Q5XI39	Q5XI39_RAT	Cryzl1	Crystallin zeta like 1	0	ENVSVTEDNFVR	ENVSVTEDNFVR	2	ENVSVTEDNFVR2	6820.89	11409.9	13885.3
D4A0G9	D4A0G9	D4A0G9_RAT	Ercc6l	ERCC excision repair 6 like, spindle assembly checkpoint helicase	1	ENVVVYR	ENVVVYR	2	ENVVVYR2		6834.12	
G3V6W5	G3V6W5	G3V6W5_RAT	Ifih1	RNA helicase	1	ENWFSTFLDVLR	ENWFSTFLDVLR	2	ENWFSTFLDVLR2		7817.69	
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	ENWLHSQQR	ENWLHSQQR	2	ENWLHSQQR2	8728.36	6881.34	6155.56
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	ENWLHSQQR	ENWLHSQQR	3	ENWLHSQQR3	29447.8	46809.2	34619.5
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	ENYAGPNCER	ENYAGPNC(UniMod:4)ER	2	ENYAGPNC(UniMod:4)ER2	51503.2	53641.5	53040
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	ENYDVWAK	ENYDVWAK	2	ENYDVWAK2	12392.4	14360.5	9157.93
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	ENYHHNIGSPYCLR	ENYHHNIGSPYC(UniMod:4)LR	3	ENYHHNIGSPYC(UniMod:4)LR3	14029.4	14310.8	19111.7
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	ENYHHNIGSPYCLR	ENYHHNIGSPYC(UniMod:4)LR	4	ENYHHNIGSPYC(UniMod:4)LR4	20261.3	33107.1	28933.4
D3ZII8	D3ZII8	D3ZII8_RAT	Smyd5	Histone-lysine N-trimethyltransferase SMYD5	1	ENYLFVCSCPK	ENYLFVC(UniMod:4)SC(UniMod:4)PK	2	ENYLFVC(UniMod:4)SC(UniMod:4)PK2	21013.9	33396.3	30692.4
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	ENYPLPWEK	ENYPLPWEK	2	ENYPLPWEK2	308906	318943	317305
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	ENYPLPWEKDTEK	ENYPLPWEKDTEK	3	ENYPLPWEKDTEK3	149365	125912	101589
B2RYU6	B2RYU6	TPC2L_RAT	Trappc2l	Trafficking protein particle complex subunit 2-like protein	1	ENYPLYIR	ENYPLYIR	2	ENYPLYIR2	40252.3	39724.4	45485
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	ENYVWSVLLHR	ENYVWSVLLHR	2	ENYVWSVLLHR2	1943.8	1951.38	1539.44
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	ENYVWSVLLHR	ENYVWSVLLHR	3	ENYVWSVLLHR3	6991.18	14415	10862.7
Q6AY84	Q6AY84	SCRN1_RAT	Scrn1	Secernin-1	1	EPAAETEALLGMDLVR	EPAAETEALLGMDLVR	2	EPAAETEALLGMDLVR2	3087.35	11187	11577.5
Q99MZ8	Q99MZ8	LASP1_RAT	Lasp1	LIM and SH3 domain protein 1	1	EPAAPVSIQR	EPAAPVSIQR	2	EPAAPVSIQR2	75130.9	46573	80240.7
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	EPADATIR	EPADATIR	2	EPADATIR2	69263	63084.7	58912.6
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	EPAGSWDLAVEGR	EPAGSWDLAVEGR	2	EPAGSWDLAVEGR2	64876.3	49094.9	53090
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	EPAHLMSLFGGK	EPAHLMSLFGGK	2	EPAHLMSLFGGK2	128269	83834.4	91957.7
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	EPAHLMSLFGGK	EPAHLMSLFGGK	3	EPAHLMSLFGGK3	1.60536e+06	1.40329e+06	1.47163e+06
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	EPAHLMSLFGGKPMIIYK	EPAHLMSLFGGKPMIIYK	3	EPAHLMSLFGGKPMIIYK3	77074.1	68599.4	74208.5
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	EPAHLMSLFGGKPMIIYK	EPAHLMSLFGGKPMIIYK	4	EPAHLMSLFGGKPMIIYK4	117526	173199	150375
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	EPALLELEGK	EPALLELEGK	2	EPALLELEGK2	57620.1	21760.5	45336.2
Q63797	Q63797	PSME1_RAT	Psme1	Proteasome activator complex subunit 1	1	EPALNEANLSNLK	EPALNEANLSNLK	2	EPALNEANLSNLK2	12708.9	6548.6	8505.76
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	EPALTTPK	EPALTTPK	2	EPALTTPK2	26817.3	24184.4	25889.7
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	EPALVLK	EPALVLK	1	EPALVLK1	10873.2		
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	EPALVLK	EPALVLK	2	EPALVLK2	540945	473278	510067
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	EPAPNTPK	EPAPNTPK	2	EPAPNTPK2	27769.4	625.654	13578
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	EPAPTTPK	EPAPTTPK	2	EPAPTTPK2	542830	401857	458525
A0A8I6AL00	A0A8I6AL00	A0A8I6AL00_RAT	Ndufs8	NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial	1	EPATINYPFEK	EPATINYPFEK	2	EPATINYPFEK2	77447.2	53646.8	54494.2
A0A0G2JYA7	A0A0G2JYA7	A0A0G2JYA7_RAT	Tarbp1	TAR (HIV-1) RNA binding protein 1	1	EPCALLGALCGGEASAER	EPC(UniMod:4)ALLGALC(UniMod:4)GGEASAER	2	EPC(UniMod:4)ALLGALC(UniMod:4)GGEASAER2		3914.66	
P03994	P03994	HPLN1_RAT	Hapln1	Hyaluronan and proteoglycan link protein 1	1	EPCGGQNTVPGVR	EPC(UniMod:4)GGQNTVPGVR	2	EPC(UniMod:4)GGQNTVPGVR2	33754.5	43821.8	42930
D4A4T0	D4A4T0	D4A4T0_RAT	Stub1	STIP1 homology and U-box containing protein 1	1	EPCITPSGITYDR	EPC(UniMod:4)ITPSGITYDR	2	EPC(UniMod:4)ITPSGITYDR2	20797.1	10511.7	15497.7
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	EPCLHPLEPDEVEYEPR	EPC(UniMod:4)LHPLEPDEVEYEPR	3	EPC(UniMod:4)LHPLEPDEVEYEPR3	13932.1	7976.7	11133.4
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	EPCPMSNNVFPDNWR	EPC(UniMod:4)PMSNNVFPDNWR	2	EPC(UniMod:4)PMSNNVFPDNWR2	27552.8	28604.5	26019.7
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	EPCPMSNNVFPDNWR	EPC(UniMod:4)PMSNNVFPDNWR	3	EPC(UniMod:4)PMSNNVFPDNWR3	17357.3	21821.4	17915.1
D3ZMV1	D3ZMV1	D3ZMV1_RAT	Sla2	Src-like-adaptor 2	1	EPCVLQK	EPC(UniMod:4)VLQK	2	EPC(UniMod:4)VLQK2	30141.5	15635.1	26415.9
D3ZED8	D3ZED8	D3ZED8_RAT	Pmel	Premelanosome protein	1	EPDDACIFPDGGPCPSGPKPPRR	EPDDAC(UniMod:4)IFPDGGPC(UniMod:4)PSGPKPPRR	4	EPDDAC(UniMod:4)IFPDGGPC(UniMod:4)PSGPKPPRR4	108975	185961	208309
Q06000	Q06000	LIPL_RAT	Lpl	Lipoprotein lipase	1	EPDSNVIVVDWLYR	EPDSNVIVVDWLYR	2	EPDSNVIVVDWLYR2	16040.9	12644.5	12373.9
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	EPDTFMEQK	EPDTFMEQK	2	EPDTFMEQK2	717013	729087	782996
A0A8I5ZTH4	A0A0G2K749;A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	0	EPEDMITGER	EPEDMITGER	2	EPEDMITGER2	28633.5	29140.4	29957.1
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	EPEEEVHDLTR	EPEEEVHDLTR	2	EPEEEVHDLTR2	5769.09	3482.24	
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	EPEEEVHDLTR	EPEEEVHDLTR	3	EPEEEVHDLTR3	37247	13195.4	25702.2
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	EPEIQETLQSEHFQLCK	EPEIQETLQSEHFQLC(UniMod:4)K	3	EPEIQETLQSEHFQLC(UniMod:4)K3	15127.6		
Q9R0C5	Q9R0C5	GALT7_RAT	Galnt7	N-acetylgalactosaminyltransferase 7	1	EPEPHGVVGGPGENAK	EPEPHGVVGGPGENAK	3	EPEPHGVVGGPGENAK3	8018.62	6672.16	6982.47
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	EPEPTTPK	EPEPTTPK	2	EPEPTTPK2	58070.8	60816.7	57785.8
Q5U2U0	Q5U2U0	CLPX_RAT	Clpx	ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial	1	EPESAAEAVK	EPESAAEAVK	2	EPESAAEAVK2	1747.57		
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	EPEVITVTLK	EPEVITVTLK	2	EPEVITVTLK2	8920.46	6981.2	8746.68
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	EPEVLSTMAIIVNK	EPEVLSTMAIIVNK	2	EPEVLSTMAIIVNK2	3606.99	5291.87	10701.4
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	EPEVLSTMAIIVNK	EPEVLSTMAIIVNK	3	EPEVLSTMAIIVNK3	4609.15	7064.21	11945.2
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	EPEVTSPGDSEGCARPLDPAPK	EPEVTSPGDSEGC(UniMod:4)ARPLDPAPK	3	EPEVTSPGDSEGC(UniMod:4)ARPLDPAPK3	12613.4	11649.1	4939.08
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	EPFAWIK	EPFAWIK	1	EPFAWIK1	4944.69	9130.12	3364.82
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	EPFAWIK	EPFAWIK	2	EPFAWIK2	254903	319343	278365
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	EPFFHGHDNYDQLVR	EPFFHGHDNYDQLVR	3	EPFFHGHDNYDQLVR3	10070.6	9072.63	12237.7
F7FH41	F7FH41	F7FH41_RAT	Csnk2a2	Casein kinase 2 alpha 2	1	EPFFHGQDNYDQLVR	EPFFHGQDNYDQLVR	3	EPFFHGQDNYDQLVR3	5385.38	9156.34	4089.62
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	EPFGTEGR	EPFGTEGR	2	EPFGTEGR2	68770.2	61584.6	30211.2
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	EPFLQQLK	EPFLQQLK	2	EPFLQQLK2	160547	121330	120271
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	EPFLSCCK	EPFLSC(UniMod:4)C(UniMod:4)K	2	EPFLSC(UniMod:4)C(UniMod:4)K2	185987	198896	160612
F1LPV0	F1LPV0	F1LPV0_RAT	Nars1	asparagine--tRNA ligase	1	EPFPTIYVDSQK	EPFPTIYVDSQK	2	EPFPTIYVDSQK2	6914.81	6154.5	4595.14
Q6Q0N0	Q6Q0N0	CSTN1_RAT	Clstn1	Calsyntenin-1	1	EPFTISVWMR	EPFTISVWMR	2	EPFTISVWMR2	7156.42	9132.57	14934.4
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	EPFTLEAYYSSPQDLPYPDPAIAQFSVQK	EPFTLEAYYSSPQDLPYPDPAIAQFSVQK	4	EPFTLEAYYSSPQDLPYPDPAIAQFSVQK4	11835.3	12278.8	8140.78
Q2QDE7	Q2QDE7	DNSL1_RAT	Dnase1l1	Deoxyribonuclease-1-like 1	1	EPFVAQFTLPSK	EPFVAQFTLPSK	2	EPFVAQFTLPSK2	2889.7	5421.71	
P15473	P15473	IBP3_RAT	Igfbp3	Insulin-like growth factor-binding protein 3	1	EPGCGCCLTCALR	EPGC(UniMod:4)GC(UniMod:4)C(UniMod:4)LTC(UniMod:4)ALR	2	EPGC(UniMod:4)GC(UniMod:4)C(UniMod:4)LTC(UniMod:4)ALR2	58743.3	54121.7	63426.5
P24594	P24594	IBP5_RAT	Igfbp5	Insulin-like growth factor-binding protein 5	1	EPGCGCCMTCALAEGQSCGVYTER	EPGC(UniMod:4)GC(UniMod:4)C(UniMod:4)MTC(UniMod:4)ALAEGQSC(UniMod:4)GVYTER	3	EPGC(UniMod:4)GC(UniMod:4)C(UniMod:4)MTC(UniMod:4)ALAEGQSC(UniMod:4)GVYTER3	10131.8	14657.5	10098.1
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	EPGEAAAEGAAEEAR	EPGEAAAEGAAEEAR	2	EPGEAAAEGAAEEAR2	78461.7	72412.1	67835.3
Q63621	Q63621	IL1AP_RAT	Il1rap	Interleukin-1 receptor accessory protein	1	EPGEELVIPCK	EPGEELVIPC(UniMod:4)K	2	EPGEELVIPC(UniMod:4)K2	13602.2	9985.12	10514.7
Q3B7T9	Q3B7T9	RFIP1_RAT	Rab11fip1	Rab11 family-interacting protein 1	1	EPGEGGGMSSDRR	EPGEGGGMSSDRR	3	EPGEGGGMSSDRR3			1730.52
P51111	P51111	HD_RAT	Htt	Huntingtin	1	EPGEQTSTPMSPK	EPGEQTSTPMSPK	2	EPGEQTSTPMSPK2	4965.29	5630.01	7942.28
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	EPGGELLAHRF	EPGGELLAHRF	3	EPGGELLAHRF3	17830.2	13978.8	7263.77
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	EPGGFLSFLR	EPGGFLSFLR	2	EPGGFLSFLR2	11046.1	11380	9096.63
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	EPGGWWK	EPGGWWK	2	EPGGWWK2	31161.7	29853.2	31524.7
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	EPGKEPPR	EPGKEPPR	2	EPGKEPPR2			37162.1
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	EPGLQIWR	EPGLQIWR	2	EPGLQIWR2	1.10995e+06	1.01414e+06	961073
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	EPGPGVEPGSGTEAEPLPLR	EPGPGVEPGSGTEAEPLPLR	3	EPGPGVEPGSGTEAEPLPLR3	13883.7	11806.6	9897.36
P01026	P01026	CO3_RAT	C3	Complement C3	1	EPGQDLVVLSLPITPEFIPSFR	EPGQDLVVLSLPITPEFIPSFR	3	EPGQDLVVLSLPITPEFIPSFR3	44200.6	31483.7	22669.7
P97576	P97576	GRPE1_RAT	Grpel1	GrpE protein homolog 1, mitochondrial	1	EPGTVALVSK	EPGTVALVSK	2	EPGTVALVSK2	10786.9	10357	10066.4
Q80WF4	Q80WF4	T132A_RAT	Tmem132a	Transmembrane protein 132A	1	EPGVTSIEVR	EPGVTSIEVR	2	EPGVTSIEVR2	6328.09	6730.74	7364.13
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	EPGWLEGTLNGK	EPGWLEGTLNGK	2	EPGWLEGTLNGK2	29478.8	20508.1	28169.4
F1LMI3	F1LMI3	F1LMI3_RAT	Cdh3	Cadherin 3	1	EPHDLMFTIHK	EPHDLMFTIHK	3	EPHDLMFTIHK3	2564.58		
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	EPHGWVVDLVNK	EPHGWVVDLVNK	2	EPHGWVVDLVNK2	11676.3	7137.27	11032.3
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	EPHGWVVDLVNK	EPHGWVVDLVNK	3	EPHGWVVDLVNK3	45921.9	41752.6	56566.3
Q8CHI9	Q8CHI9	CHSTF_RAT	Chst15	Carbohydrate sulfotransferase 15	1	EPHWWTR	EPHWWTR	2	EPHWWTR2	6195	6568.62	
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EPIAASTNR	EPIAASTNR	2	EPIAASTNR2	38614.6	32022.8	32073.4
D4A2N2	D4A2N2	D4A2N2_RAT	Inpp5b	phosphoinositide 5-phosphatase	1	EPILDLPLK	EPILDLPLK	2	EPILDLPLK2	10305.4	9582.12	6941.72
Q5XI07	Q5XI07	LPP_RAT	Lpp	Lipoma-preferred partner homolog	1	EPIMPAPGQEETVR	EPIMPAPGQEETVR	2	EPIMPAPGQEETVR2	46104.6	34348.1	24909.8
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	EPIPSLEAIYLLSPTEK	EPIPSLEAIYLLSPTEK	2	EPIPSLEAIYLLSPTEK2	36027.7	28234.3	38446.1
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	EPIPSLEAIYLLSPTEK	EPIPSLEAIYLLSPTEK	3	EPIPSLEAIYLLSPTEK3	15781.4	14957.9	14399.4
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	EPIPVLPTVHYNMGGIPTNYK	EPIPVLPTVHYNMGGIPTNYK	3	EPIPVLPTVHYNMGGIPTNYK3	53641.3	37144.4	51063.4
Q9Z1S7	Q9Z1S7	OMD_RAT	Omd	Osteomodulin	1	EPISSYIFFCFPR	EPISSYIFFC(UniMod:4)FPR	2	EPISSYIFFC(UniMod:4)FPR2	2801	2691.17	
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	EPITDVSVIIK	EPITDVSVIIK	2	EPITDVSVIIK2	29308	24873.2	19720.4
P27139	P27139	CAH2_RAT	Ca2	Carbonic anhydrase 2	1	EPITVSSEQMSHFR	EPITVSSEQMSHFR	3	EPITVSSEQMSHFR3	7129.87	7652.7	7401.03
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EPIVGSTDYGK	EPIVGSTDYGK	2	EPIVGSTDYGK2	9710.62	15824.1	17278.1
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	EPIYHSPITK	EPIYHSPITK	3	EPIYHSPITK3	8443.62		2822.19
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	EPKPPFLKPTGVSPR	EPKPPFLKPTGVSPR	3	EPKPPFLKPTGVSPR3	92643	80151.8	75088.4
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	EPKPPFLKPTGVSPR	EPKPPFLKPTGVSPR	4	EPKPPFLKPTGVSPR4	243255	180816	205850
Q7M733	Q7M733	HPS6_RAT	Hps6	BLOC-2 complex member HPS6	1	EPLAVHTWAPSSQGLLLLDLK	EPLAVHTWAPSSQGLLLLDLK	3	EPLAVHTWAPSSQGLLLLDLK3		3808.07	1771.07
P47816	P47816	PDCD2_RAT	Pdcd2	Programmed cell death protein 2	1	EPLCCAGLR	EPLC(UniMod:4)C(UniMod:4)AGLR	2	EPLC(UniMod:4)C(UniMod:4)AGLR2	8406.99	6710.93	9105.24
O88994	O88994	MARC2_RAT	Mtarc2	Mitochondrial amidoxime reducing component 2	1	EPLETLK	EPLETLK	2	EPLETLK2	45332.5	33083	29988.2
Q642G4	Q642G4	PEX14_RAT	Pex14	Peroxisomal membrane protein PEX14	1	EPLIATAVK	EPLIATAVK	2	EPLIATAVK2	53777.2	54358.6	57255.2
B0BNE3	B0BNE3	B0BNE3_RAT	Trappc5	Trafficking protein particle complex subunit 5	1	EPLINTYISVPK	EPLINTYISVPK	2	EPLINTYISVPK2	15517.3	13835.4	12212
P11507	Q64578;P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	0	EPLISGWLFFR	EPLISGWLFFR	2	EPLISGWLFFR2	2637.53	5618.37	7693.76
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	EPLLMSISTNLK	EPLLMSISTNLK	2	EPLLMSISTNLK2	13432.2		6569.83
Q3T1I9	Q3T1I9	RPAP1_RAT	Rpap1	RNA polymerase II-associated protein 1	1	EPLLPTDWPFQPLIHLYHR	EPLLPTDWPFQPLIHLYHR	4	EPLLPTDWPFQPLIHLYHR4	5514.08	4114.31	4081.25
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	EPLLSSSENGTGGTEAAPADAR	EPLLSSSENGTGGTEAAPADAR	3	EPLLSSSENGTGGTEAAPADAR3	3283.7	3442.72	4956.51
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	EPLLTLVK	EPLLTLVK	2	EPLLTLVK2	181465	164264	161097
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	EPLMEEYSIATQVWK	EPLMEEYSIATQVWK	2	EPLMEEYSIATQVWK2	12723.9	16610	20581.2
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	EPLMEEYSIATQVWK	EPLMEEYSIATQVWK	3	EPLMEEYSIATQVWK3	15353.3	13473.5	12571.4
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	EPLMPSPQFIK	EPLMPSPQFIK	2	EPLMPSPQFIK2	12909	16314.6	25915.8
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	EPLPSLEAVYLITPSEK	EPLPSLEAVYLITPSEK	2	EPLPSLEAVYLITPSEK2	7752.96	8491.82	8837.31
B0BNB9	B0BNB9	B0BNB9_RAT	Htra2	HtrA serine peptidase 2	1	EPLPTLPLGR	EPLPTLPLGR	2	EPLPTLPLGR2	72406.7	67615.3	72943.1
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	EPLPTMFSMLHPLDEITPLVCK	EPLPTMFSMLHPLDEITPLVC(UniMod:4)K	3	EPLPTMFSMLHPLDEITPLVC(UniMod:4)K3	3763.23	4000.7	6133.52
E9PSY0	E9PSY0	E9PSY0_RAT	Axl	receptor protein-tyrosine kinase	1	EPLQGTLLGYR	EPLQGTLLGYR	2	EPLQGTLLGYR2	61826.8	50256.1	52115.3
Q562B5	Q562B5	PGAM5_RAT	Pgam5	Serine/threonine-protein phosphatase PGAM5, mitochondrial	1	EPLSLINLK	EPLSLINLK	2	EPLSLINLK2	15151.8	6559.3	
Q63009	Q63009;A0A0G2K9I8	ANM1_RAT	Prmt1	Protein arginine N-methyltransferase 1	0	EPLVDVVDPK	EPLVDVVDPK	2	EPLVDVVDPK2	9587.65	6915.41	9689.74
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	EPLYIGGAPDFSK	EPLYIGGAPDFSK	2	EPLYIGGAPDFSK2	41651.2	34660.3	39220.2
P51111	P51111	HD_RAT	Htt	Huntingtin	1	EPMMATVCVQQLLK	EPMMATVC(UniMod:4)VQQLLK	2	EPMMATVC(UniMod:4)VQQLLK2		2643.39	
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	EPMQTGIK	EPMQTGIK	1	EPMQTGIK1	9495.97	6776.85	6842.59
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	EPMQTGIK	EPMQTGIK	2	EPMQTGIK2	1.27761e+06	1.23205e+06	1.33655e+06
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	EPNPMVQLSVQDVTQESK	EPNPMVQLSVQDVTQESK	3	EPNPMVQLSVQDVTQESK3	7743.54	7610.19	7215.9
P83953	P83953	IMA5_RAT	Kpna1	Importin subunit alpha-5	1	EPNPPIDEVINTPGVVAR	EPNPPIDEVINTPGVVAR	2	EPNPPIDEVINTPGVVAR2	75833.6	58642.6	69896.9
P83953	P83953	IMA5_RAT	Kpna1	Importin subunit alpha-5	1	EPNPPIDEVINTPGVVAR	EPNPPIDEVINTPGVVAR	3	EPNPPIDEVINTPGVVAR3	93786.2	64709.6	95076
P35281	P35281	RAB10_RAT	Rab10	Ras-related protein Rab-10	1	EPNSENVDISSGGGVTGWK	EPNSENVDISSGGGVTGWK	2	EPNSENVDISSGGGVTGWK2	13988.7	10591.7	13086.6
P35281	P35281	RAB10_RAT	Rab10	Ras-related protein Rab-10	1	EPNSENVDISSGGGVTGWK	EPNSENVDISSGGGVTGWK	3	EPNSENVDISSGGGVTGWK3	4188.88		
D3ZE05	D3ZE05	D3ZE05_RAT	Cilp2	Cartilage intermediate layer protein 2	1	EPPARPSLFQR	EPPARPSLFQR	3	EPPARPSLFQR3	69080.2	88348.2	93759.3
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	EPPCFLQCFQGGMVVHSGR	EPPC(UniMod:4)FLQC(UniMod:4)FQGGMVVHSGR	3	EPPC(UniMod:4)FLQC(UniMod:4)FQGGMVVHSGR3	6676.59	5431.69	7834.69
Q7TP48	Q7TP48	APMAP_RAT	Apmap	Adipocyte plasma membrane-associated protein	1	EPPFMFGVLQPNTK	EPPFMFGVLQPNTK	2	EPPFMFGVLQPNTK2	39277.6	26794	36721.5
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	EPPLELK	EPPLELK	2	EPPLELK2	439284	429859	462052
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	EPPPGAEAYIPQR	EPPPGAEAYIPQR	2	EPPPGAEAYIPQR2	28414.6	35735.8	27311.7
Q3B7D1	Q3B7D1	UBE2Z_RAT	Ube2z	Ubiquitin-conjugating enzyme E2 Z	1	EPPPGMFVVPDTVDMTK	EPPPGMFVVPDTVDMTK	2	EPPPGMFVVPDTVDMTK2	40473	33869.8	46496.8
Q3B7D1	Q3B7D1	UBE2Z_RAT	Ube2z	Ubiquitin-conjugating enzyme E2 Z	1	EPPPGMFVVPDTVDMTK	EPPPGMFVVPDTVDMTK	3	EPPPGMFVVPDTVDMTK3	18704.8	19727.5	32502.7
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	EPPQVSINAR	EPPQVSINAR	2	EPPQVSINAR2	6227.09	22537.4	11585.6
Q6IE52	Q6IE52	MUG2_RAT	Mug2	Murinoglobulin-2	1	EPPRKDPPR	EPPRKDPPR	2	EPPRKDPPR2			10636.8
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	EPPYGADILR	EPPYGADILR	2	EPPYGADILR2	11502.5	2076.41	18301.2
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	EPQCLPGDR	EPQC(UniMod:4)LPGDR	2	EPQC(UniMod:4)LPGDR2	18307.6		16064.2
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	EPQLAFHQR	EPQLAFHQR	2	EPQLAFHQR2	30900.3	28019.2	20576.7
D3ZJI7	D3ZJI7	D3ZJI7_RAT	Serpinb11	Serpin family B member 11	1	EPQMQVLELPYANNK	EPQMQVLELPYANNK	2	EPQMQVLELPYANNK2	4759.73	3866.96	
Q9EP80	Q9EP80	PICK1_RAT	Pick1	PRKCA-binding protein	1	EPQPAASEAFVK	EPQPAASEAFVK	2	EPQPAASEAFVK2	7772.35	9650.16	5823.23
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	EPSAAPAR	EPSAAPAR	2	EPSAAPAR2			210830
B0BNH1	B0BNH1	B0BNH1_RAT	Gnptg	N-acetylglucosamine-1-phosphate transferase subunit gamma	1	EPSAVSGPPHLFR	EPSAVSGPPHLFR	3	EPSAVSGPPHLFR3	13842.8	4951.16	5137.62
B0BNB9	B0BNB9	B0BNB9_RAT	Htra2	HtrA serine peptidase 2	1	EPSFPDVQHGVLIHK	EPSFPDVQHGVLIHK	4	EPSFPDVQHGVLIHK4	12248.2	8720.88	5854.03
B0LT89	B0LT89	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	1	EPSFRPTAK	EPSFRPTAK	2	EPSFRPTAK2	8154.6	3422.9	2524.06
F7FI79	F7FI79	F7FI79_RAT	Fhip2b	FHF complex subunit HOOK interacting protein 2B	1	EPSIDLLQAFVEHWK	EPSIDLLQAFVEHWK	3	EPSIDLLQAFVEHWK3	1459.19		4580.89
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	EPSPILRPNLEGSGPLPR	EPSPILRPNLEGSGPLPR	3	EPSPILRPNLEGSGPLPR3	7648.25	10032.7	8494.1
A0A0G2JZS1	A0A0G2JZS1	A0A0G2JZS1_RAT	Kpna6	Importin subunit alpha	1	EPSPPIDEVINTPGVVDR	EPSPPIDEVINTPGVVDR	2	EPSPPIDEVINTPGVVDR2	38135.7	43855.3	32733.5
A0A0G2JZS1	A0A0G2JZS1	A0A0G2JZS1_RAT	Kpna6	Importin subunit alpha	1	EPSPPIDEVINTPGVVDR	EPSPPIDEVINTPGVVDR	3	EPSPPIDEVINTPGVVDR3	13840.3		14101.5
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	EPSTTSGGGQLNR	EPSTTSGGGQLNR	2	EPSTTSGGGQLNR2	19262.7	10044.2	18097.8
D3ZET9	D4A1G8;D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	0	EPSYFEIPTK	EPSYFEIPTK	2	EPSYFEIPTK2	64353.8	72606.4	61855.4
P26051	P26051	CD44_RAT	Cd44	CD44 antigen	1	EPTETPDQFMTADETR	EPTETPDQFMTADETR	2	EPTETPDQFMTADETR2	60117.5	50014.3	46252.6
P26051	P26051	CD44_RAT	Cd44	CD44 antigen	1	EPTETPDQFMTADETR	EPTETPDQFMTADETR	3	EPTETPDQFMTADETR3	24766.2	23301.9	26797.2
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	EPTFSPEEGYVK	EPTFSPEEGYVK	2	EPTFSPEEGYVK2	216761	178856	224141
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	EPTLLSPLHCWAMLLEHTR	EPTLLSPLHC(UniMod:4)WAMLLEHTR	3	EPTLLSPLHC(UniMod:4)WAMLLEHTR3	9069.33	8823.18	
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	EPTLLSPLHCWAMLLEHTR	EPTLLSPLHC(UniMod:4)WAMLLEHTR	4	EPTLLSPLHC(UniMod:4)WAMLLEHTR4	3751.79		5428.47
D4A7L4	D4A7L4	D4A7L4_RAT	Ndufb11	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial	1	EPTMVWQEDPEPEDENLYAK	EPTMVWQEDPEPEDENLYAK	3	EPTMVWQEDPEPEDENLYAK3	11850.5	12767	5710.52
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	EPTPSIASDISLPIATQELR	EPTPSIASDISLPIATQELR	3	EPTPSIASDISLPIATQELR3	19835	20723.2	20822
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	EPTPTPEDTSQDVTTVTLLLR	EPTPTPEDTSQDVTTVTLLLR	3	EPTPTPEDTSQDVTTVTLLLR3	10431.7	12238.9	10611.6
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	EPTSPVSR	EPTSPVSR	2	EPTSPVSR2	111511	110554	96772.8
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	EPTSTNPKEPEPTLPK	EPTSTNPKEPEPTLPK	3	EPTSTNPKEPEPTLPK3	2808.22	4898.01	3106.11
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	EPTTQITEEVR	EPTTQITEEVR	2	EPTTQITEEVR2	9715.06	6505.84	10911.5
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	EPTTQITEEVRDQLLEASAATR	EPTTQITEEVRDQLLEASAATR	3	EPTTQITEEVRDQLLEASAATR3	44161.7	37656.4	51043.2
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	EPTYQLNIHDIK	EPTYQLNIHDIK	3	EPTYQLNIHDIK3	4883.91	10434.1	4937.44
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	EPVDIIEGVK	EPVDIIEGVK	2	EPVDIIEGVK2	25103.1	27695.1	27606.1
Q5PQN9	Q5PQN9	RM38_RAT	Mrpl38	Large ribosomal subunit protein mL38	1	EPVFEFVRPPPYHPK	EPVFEFVRPPPYHPK	4	EPVFEFVRPPPYHPK4	11779.1		
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	EPVFVGGVPESLLTPR	EPVFVGGVPESLLTPR	2	EPVFVGGVPESLLTPR2	10705.6	5020.82	8340.13
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	EPVGQIVCTDK	EPVGQIVC(UniMod:4)TDK	2	EPVGQIVC(UniMod:4)TDK2	5006.45	6909.16	
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	EPVGTCFLQDGTK	EPVGTC(UniMod:4)FLQDGTK	2	EPVGTC(UniMod:4)FLQDGTK2	72684.4	49403.9	71565.4
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	EPVHLSGYGVELAIK	EPVHLSGYGVELAIK	3	EPVHLSGYGVELAIK3	8044.8	9219.64	6739.32
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	EPVLAQLR	EPVLAQLR	2	EPVLAQLR2	80561.8	56143.5	91350.4
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	EPVLNEISATYVR	EPVLNEISATYVR	2	EPVLNEISATYVR2	83550.3	90943.6	94067.6
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	EPVLNEISATYVR	EPVLNEISATYVR	3	EPVLNEISATYVR3	10201.3	9260.46	6095.59
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	EPVPAWEGK	EPVPAWEGK	2	EPVPAWEGK2	11473.4	8945.27	8397.67
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	EPVPSTAEGK	EPVPSTAEGK	2	EPVPSTAEGK2	2.95229e+06	2.23222e+06	3.4487e+06
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	EPVPTTPK	EPVPTTPK	2	EPVPTTPK2	86805.3	56405.9	74372.5
Q99MI5	Q99MI5	Q99MI5_RAT	Srm	Spermidine synthase	1	EPVQQLTQAQVEQMQLK	EPVQQLTQAQVEQMQLK	3	EPVQQLTQAQVEQMQLK3	3571.27	1064.49	
A0A8I6GAD6	A0A8I6GAD6	A0A8I6GAD6_RAT	Nrbp1	Nuclear receptor binding protein 1	1	EPVQTLYSQSPALELDK	EPVQTLYSQSPALELDK	2	EPVQTLYSQSPALELDK2	23844.9	27929.1	22163.8
A0A8I6GAD6	A0A8I6GAD6	A0A8I6GAD6_RAT	Nrbp1	Nuclear receptor binding protein 1	1	EPVQTLYSQSPALELDK	EPVQTLYSQSPALELDK	3	EPVQTLYSQSPALELDK3	50389.3	44092.4	60978.8
P24268	P24268	CATD_RAT	Ctsd	Cathepsin D	1	EPVSELLK	EPVSELLK	2	EPVSELLK2	81788.7	89626.6	77579
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	EPVSLEEWTK	EPVSLEEWTK	2	EPVSLEEWTK2	31424.7	31469.4	33252.3
A0A0G2K6C7	A0A0G2K6C7	A0A0G2K6C7_RAT	Trim5	Tripartite motif-containing 5	1	EPVSTDCNHSFCR	EPVSTDC(UniMod:4)NHSFC(UniMod:4)R	3	EPVSTDC(UniMod:4)NHSFC(UniMod:4)R3	24585.6	24851.3	23216.7
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	EPVVTLEGHTK	EPVVTLEGHTK	2	EPVVTLEGHTK2	12753	11127.3	5938.69
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	EPWLLASQYQDAIR	EPWLLASQYQDAIR	2	EPWLLASQYQDAIR2	138196	130440	117663
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	EPWLLASQYQDAIR	EPWLLASQYQDAIR	3	EPWLLASQYQDAIR3	32540.8	19172.7	30932.8
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	EPYEVAQFNVEHFSGMHNWYACSHAR	EPYEVAQFNVEHFSGMHNWYAC(UniMod:4)SHAR	4	EPYEVAQFNVEHFSGMHNWYAC(UniMod:4)SHAR4	2901.2	1295.57	6005.61
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	EPYMEGVNPFIK	EPYMEGVNPFIK	2	EPYMEGVNPFIK2	10391.2	14766.3	12792.7
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	EPYTLTVTEGQTAR	EPYTLTVTEGQTAR	2	EPYTLTVTEGQTAR2	14526.3	9118.58	13317.8
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	EQAAAAHEVEK	EQAAAAHEVEK	2	EQAAAAHEVEK2			9715.54
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	EQAADTEGAQEVTQLLVER	EQAADTEGAQEVTQLLVER	3	EQAADTEGAQEVTQLLVER3	21594.7	27250.1	19476.5
Q0D2L2	Q0D2L2	Q0D2L2_RAT	Mrps22	Mitochondrial ribosomal protein S22	1	EQAAEGVNLIK	EQAAEGVNLIK	2	EQAAEGVNLIK2	8661.89	8196.19	7167.8
G3V8G2	G3V8G2	G3V8G2_RAT	Psmd5	26S proteasome non-ATPase regulatory subunit 5	1	EQAAELR	EQAAELR	2	EQAAELR2	92753.2	92300.6	96223.6
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	EQAAQGDTTALQR	EQAAQGDTTALQR	2	EQAAQGDTTALQR2	327292	348513	334215
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	EQAAQGDTTALQR	EQAAQGDTTALQR	3	EQAAQGDTTALQR3	11502	10138.9	19568.5
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	EQAASVGTQVEEAAER	EQAASVGTQVEEAAER	2	EQAASVGTQVEEAAER2	12908.1	7657.89	8970.77
Q62812	Q63862;Q62812	MYH9_RAT	Myh9	Myosin-9	0	EQADFAIEALAK	EQADFAIEALAK	2	EQADFAIEALAK2	753085	911815	778778
Q62812	Q63862;Q62812	MYH9_RAT	Myh9	Myosin-9	0	EQADFAIEALAK	EQADFAIEALAK	3	EQADFAIEALAK3	81726.5	94342.4	91606.6
F1LNF0	F1LNF0	F1LNF0_RAT	Myh14	Myosin heavy chain 14	1	EQADFALEALAK	EQADFALEALAK	2	EQADFALEALAK2	292779	358842	296301
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EQADYCVSHMK	EQADYC(UniMod:4)VSHMK	2	EQADYC(UniMod:4)VSHMK2	7834.22	14622.5	4217.68
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EQADYCVSHMK	EQADYC(UniMod:4)VSHMK	3	EQADYC(UniMod:4)VSHMK3	59308.7	54566.2	44921.2
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EQADYCVSHMKPYVDGK	EQADYC(UniMod:4)VSHMKPYVDGK	3	EQADYC(UniMod:4)VSHMKPYVDGK3	63796	73833.6	55538.7
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EQADYCVSHMKPYVDGK	EQADYC(UniMod:4)VSHMKPYVDGK	4	EQADYC(UniMod:4)VSHMKPYVDGK4	172054	202220	223141
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	EQAEAEVASLNR	EQAEAEVASLNR	2	EQAEAEVASLNR2	3.33921e+06	3.16614e+06	3.29904e+06
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	EQAEAEVASLNR	EQAEAEVASLNR	3	EQAEAEVASLNR3	851972	955210	978051
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	EQAEAEVASLNRR	EQAEAEVASLNRR	2	EQAEAEVASLNRR2	10859.4	13886.6	5332.9
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	EQAEAEVASLNRR	EQAEAEVASLNRR	3	EQAEAEVASLNRR3	2.6292e+06	3.21089e+06	3.47312e+06
Q562B5	Q562B5	PGAM5_RAT	Pgam5	Serine/threonine-protein phosphatase PGAM5, mitochondrial	1	EQAELTGIR	EQAELTGIR	2	EQAELTGIR2	26175.4	30553.5	36019.6
P00173	P00173	CYB5_RAT	Cyb5a	Cytochrome b5	1	EQAGGDATENFEDVGHSTDAR	EQAGGDATENFEDVGHSTDAR	3	EQAGGDATENFEDVGHSTDAR3	65546.2	59422.1	56883.4
Q5RKH6	Q5RKH6	OS9_RAT	Os9	Protein OS-9	1	EQAILALTSTLDK	EQAILALTSTLDK	2	EQAILALTSTLDK2	7281.43	8195.71	5386.86
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	EQAIVLVNAR	EQAIVLVNAR	2	EQAIVLVNAR2	213112	245926	238030
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	EQALADLNSVER	EQALADLNSVER	2	EQALADLNSVER2	249103	226835	243850
P62815	P62815	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	1	EQALAVSR	EQALAVSR	2	EQALAVSR2	58692.6	59253.2	55557.6
Q6TMG5	Q6TMG5	NEMO_RAT	Ikbkg	NF-kappa-B essential modulator	1	EQALEDLEHLKK	EQALEDLEHLKK	3	EQALEDLEHLKK3	8247.46	5165.26	4901.21
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	EQALSVLR	EQALSVLR	2	EQALSVLR2	22287.5	21185.9	19861
B0BN65	B0BN65	B0BN65_RAT	Cyria	CYFIP related Rac1 interactor A	1	EQAPDSVEGLLNALR	EQAPDSVEGLLNALR	2	EQAPDSVEGLLNALR2	18777.7	6552.48	7571.13
B0BN65	B0BN65	B0BN65_RAT	Cyria	CYFIP related Rac1 interactor A	1	EQAPDSVEGLLNALR	EQAPDSVEGLLNALR	3	EQAPDSVEGLLNALR3	2792.14	3953.71	2809.39
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	EQAPNLVYMVTGNPASDEIR	EQAPNLVYMVTGNPASDEIR	3	EQAPNLVYMVTGNPASDEIR3	1.56954e+06	1.60639e+06	1.77758e+06
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	EQAPNLVYMVTGNPASDEIRR	EQAPNLVYMVTGNPASDEIRR	3	EQAPNLVYMVTGNPASDEIRR3	1.13819e+06	1.2477e+06	1.20977e+06
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	EQAQQIELK	EQAQQIELK	2	EQAQQIELK2	19641.3	12800.6	16325.9
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	EQAQWTPTK	EQAQWTPTK	2	EQAQWTPTK2	50824.8	45683.6	61916.2
Q5PPN7	Q5PPN7	MITOK_RAT	Ccdc51	Mitochondrial potassium channel	1	EQASSYSLQQK	EQASSYSLQQK	2	EQASSYSLQQK2	1265.42	3391.74	2834.64
A0A0G2K5N0	D4ABZ4;A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	0	EQAVIPLTDSEHK	EQAVIPLTDSEHK	2	EQAVIPLTDSEHK2	11192.4	8752.02	13085.8
A0A0G2K5N0	D4ABZ4;A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	0	EQAVIPLTDSEHK	EQAVIPLTDSEHK	3	EQAVIPLTDSEHK3	64036.1	74441.5	72399.9
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	EQAVQSLQQQR	EQAVQSLQQQR	2	EQAVQSLQQQR2	32640.6	26338	21817.3
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	EQAVTLAK	EQAVTLAK	2	EQAVTLAK2	23764	13371.5	28896.7
P62634	P62634	CNBP_RAT	Cnbp	CCHC-type zinc finger nucleic acid binding protein	1	EQCCYNCGKPGHLAR	EQC(UniMod:4)C(UniMod:4)YNC(UniMod:4)GKPGHLAR	4	EQC(UniMod:4)C(UniMod:4)YNC(UniMod:4)GKPGHLAR4	7011	15548.3	
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	EQCGLDLSIDR	EQC(UniMod:4)GLDLSIDR	2	EQC(UniMod:4)GLDLSIDR2	26073.3	26184	34484.9
P58751	P58751	RELN_RAT	Reln	Reelin	1	EQCICDPGYSGPHCYLTHTLK	EQC(UniMod:4)IC(UniMod:4)DPGYSGPHC(UniMod:4)YLTHTLK	3	EQC(UniMod:4)IC(UniMod:4)DPGYSGPHC(UniMod:4)YLTHTLK3	22412.6	20966.9	14656
P58751	P58751	RELN_RAT	Reln	Reelin	1	EQCICDPGYSGPHCYLTHTLK	EQC(UniMod:4)IC(UniMod:4)DPGYSGPHC(UniMod:4)YLTHTLK	4	EQC(UniMod:4)IC(UniMod:4)DPGYSGPHC(UniMod:4)YLTHTLK4	66483.7	76946.6	69386.6
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	EQCIETFLILGASQK	EQC(UniMod:4)IETFLILGASQK	2	EQC(UniMod:4)IETFLILGASQK2	5051.88	6017.5	2931.55
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	EQCIETFLILGASQK	EQC(UniMod:4)IETFLILGASQK	3	EQC(UniMod:4)IETFLILGASQK3	4862.38	5656.29	8629.11
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	EQCTMGTGCCLQPAEGR	EQC(UniMod:4)TMGTGC(UniMod:4)C(UniMod:4)LQPAEGR	2	EQC(UniMod:4)TMGTGC(UniMod:4)C(UniMod:4)LQPAEGR2	114322	118934	99152.2
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	EQCTMGTGCCLQPAEGR	EQC(UniMod:4)TMGTGC(UniMod:4)C(UniMod:4)LQPAEGR	3	EQC(UniMod:4)TMGTGC(UniMod:4)C(UniMod:4)LQPAEGR3	65008.1	59174.5	69428.5
Q6AY97	Q6AY97	CCD91_RAT	Ccdc91	Coiled-coil domain-containing protein 91	1	EQDAVSFQAR	EQDAVSFQAR	2	EQDAVSFQAR2	8656.46	6230.93	8340.94
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	EQDAYSTLLSHIFHCR	EQDAYSTLLSHIFHC(UniMod:4)R	3	EQDAYSTLLSHIFHC(UniMod:4)R3	4360.65	12295.7	7547.92
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	EQDAYSTLLSHIFHCR	EQDAYSTLLSHIFHC(UniMod:4)R	4	EQDAYSTLLSHIFHC(UniMod:4)R4	14604.3	20114.1	8680.3
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	EQDDSALQIQK	EQDDSALQIQK	2	EQDDSALQIQK2	25045.6	27087.8	19178.2
Q6AZ45	Q6AZ45	Q6AZ45_RAT	Fcer2	Fc fragment of IgE receptor II	1	EQDFLMQHINK	EQDFLMQHINK	3	EQDFLMQHINK3	7208.98	3761.43	
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	EQDGLDSWVSR	EQDGLDSWVSR	2	EQDGLDSWVSR2	21533.4	11441.1	12398.2
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	EQDHIIIIPR	EQDHIIIIPR	2	EQDHIIIIPR2	19026.7	16919.6	16002.1
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	EQDHIIIIPR	EQDHIIIIPR	3	EQDHIIIIPR3	308575	370247	344041
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	EQDLQLEELK	EQDLQLEELK	2	EQDLQLEELK2	452923	445704	456685
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	EQDLQLEELKQQVSTLK	EQDLQLEELKQQVSTLK	3	EQDLQLEELKQQVSTLK3	34085.1	49807.5	44438
A0A0G2JSI4	A0A0G2JSI4	A0A0G2JSI4_RAT	Adgre5	Adhesion G protein-coupled receptor E5	1	EQDNKDVTTVHHSQAWMQLDWAVTAGAK	EQDNKDVTTVHHSQAWMQLDWAVTAGAK	4	EQDNKDVTTVHHSQAWMQLDWAVTAGAK4	11351.9	12522.1	18183.8
A0A8I6B124	A0A8I6B124	A0A8I6B124_RAT	Zswim8	Zinc finger, SWIM-type containing 8	1	EQDNLMLEK	EQDNLMLEK	2	EQDNLMLEK2			3354.93
D3ZD83	D3ZD83	D3ZD83_RAT	Mfsd10	Major facilitator superfamily domain containing 10	1	EQDPLYGSWQR	EQDPLYGSWQR	2	EQDPLYGSWQR2	22761.2	22827.7	20338.4
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	EQDQTLLLK	EQDQTLLLK	2	EQDQTLLLK2	12191.6	8730.5	8409.33
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	EQDVDVSSHSYTINGLK	EQDVDVSSHSYTINGLK	3	EQDVDVSSHSYTINGLK3	3583.84	3933.79	
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	EQDVVQGWR	EQDVVQGWR	2	EQDVVQGWR2	10684.5	16782	10162.4
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	EQEAQEEELRK	EQEAQEEELRK	3	EQEAQEEELRK3	16135.3	10795.2	16370.9
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	EQEAQFEK	EQEAQFEK	2	EQEAQFEK2	12743.2	18381.4	19164.2
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	EQEEAAALR	EQEEAAALR	2	EQEEAAALR2	33502.3	39559.6	26376.4
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	EQEEEREAIR	EQEEEREAIR	3	EQEEEREAIR3	19146.2	27223.4	29339.9
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	EQEEKEDTETQAVATSPDGR	EQEEKEDTETQAVATSPDGR	3	EQEEKEDTETQAVATSPDGR3	3771.84	6420.66	5528.28
Q08851	Q08851	STX5_RAT	Stx5	Syntaxin-5	1	EQEETIQR	EQEETIQR	2	EQEETIQR2	30194.3	17964.7	
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	EQEGQYYCTAFNR	EQEGQYYC(UniMod:4)TAFNR	2	EQEGQYYC(UniMod:4)TAFNR2	14387.3	9260.89	12986.6
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	EQEIAAVQAR	EQEIAAVQAR	2	EQEIAAVQAR2	127174	118769	122920
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	EQELNQSIHENEILMAELEELDK	EQELNQSIHENEILMAELEELDK	3	EQELNQSIHENEILMAELEELDK3	5801.51	7859.61	1452.31
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	EQELQAK	EQELQAK	2	EQELQAK2	110602		80829.2
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	EQELSWGLHQIVK	EQELSWGLHQIVK	2	EQELSWGLHQIVK2		2778.95	
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	EQELSWGLHQIVK	EQELSWGLHQIVK	3	EQELSWGLHQIVK3	23396.8	23801.4	13238.9
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	EQENMDDANSEQQFR	EQENMDDANSEQQFR	2	EQENMDDANSEQQFR2	2647.41	1223.32	3489.66
Q9WTN5	Q9WTN5	TPC1_RAT	Tpcn1	Two pore calcium channel protein 1	1	EQEQQQLR	EQEQQQLR	2	EQEQQQLR2	18285.7		11103.3
A0A8I6AEI1	A0A8I6AEI1	A0A8I6AEI1_RAT	Hps1	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1	1	EQEQSFAVEAVER	EQEQSFAVEAVER	2	EQEQSFAVEAVER2	3113.98	4438.76	4804.79
M0R402	M0R402	M0R402_RAT	Tmx3	Thioredoxin-related transmembrane protein 3	1	EQESSSGGSLVPTVQESK	EQESSSGGSLVPTVQESK	2	EQESSSGGSLVPTVQESK2	80588.6	61682.9	57099.8
M0R402	M0R402	M0R402_RAT	Tmx3	Thioredoxin-related transmembrane protein 3	1	EQESSSGGSLVPTVQESK	EQESSSGGSLVPTVQESK	3	EQESSSGGSLVPTVQESK3	17636.1	23768.7	14562.4
B1WBN7	B1WBN7	B1WBN7_RAT	Fam20c	FAM20C	1	EQETPPDFFYFSDYER	EQETPPDFFYFSDYER	3	EQETPPDFFYFSDYER3		4930.41	5382.65
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	EQEVSILK	EQEVSILK	1	EQEVSILK1	6991.7	4608.34	5565.59
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	EQEVSILK	EQEVSILK	2	EQEVSILK2	1.02598e+06	862199	1.3828e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	EQEVSILKK	EQEVSILKK	2	EQEVSILKK2	5325.94	15235.7	14203
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	EQEWNPEKPDSYAGIFHFNFWR	EQEWNPEKPDSYAGIFHFNFWR	3	EQEWNPEKPDSYAGIFHFNFWR3	9051.36	14107.4	3946.37
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	EQEWNPEKPDSYAGIFHFNFWR	EQEWNPEKPDSYAGIFHFNFWR	4	EQEWNPEKPDSYAGIFHFNFWR4	18899.9	23112	11965
A0A0G2JVL5	A0A0G2JVL5	A0A0G2JVL5_RAT	Rimoc1	Similar to expressed sequence AW549877	1	EQEWNTTNAK	EQEWNTTNAK	2	EQEWNTTNAK2	1668.28	2782.44	4638.08
Q5EGY4	Q5EGY4	YKT6_RAT	Ykt6	Synaptobrevin homolog YKT6	1	EQEYLCHVYVR	EQEYLC(UniMod:4)HVYVR	3	EQEYLC(UniMod:4)HVYVR3	29813	29545.3	37671.7
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	EQFALAMYFIQQK	EQFALAMYFIQQK	2	EQFALAMYFIQQK2	1811.59	2938.69	1778.22
A0A0G2K1D2	A0A0G2K1D2	A0A0G2K1D2_RAT	Rap1gds1	Rap1 GTPase-GDP dissociation stimulator 1	1	EQFASTNIAEELVK	EQFASTNIAEELVK	2	EQFASTNIAEELVK2	5141.38	1501.75	7058.35
Q5XIP1	Q5XIP1	PELO_RAT	Pelo	Protein pelota homolog	1	EQFCDYMFQQAVK	EQFC(UniMod:4)DYMFQQAVK	2	EQFC(UniMod:4)DYMFQQAVK2	15216.6	13669.2	16974.7
Q5XIP1	Q5XIP1	PELO_RAT	Pelo	Protein pelota homolog	1	EQFCDYMFQQAVK	EQFC(UniMod:4)DYMFQQAVK	3	EQFC(UniMod:4)DYMFQQAVK3	5772.98	5721.72	3496.38
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	EQFLDGDAWTNR	EQFLDGDAWTNR	2	EQFLDGDAWTNR2	81262.5	86504.4	77818.4
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	EQFLDGDAWTNR	EQFLDGDAWTNR	3	EQFLDGDAWTNR3	102253	102899	127797
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	EQFNDFR	EQFNDFR	2	EQFNDFR2	54092.4	63709.2	49519.2
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	EQFNDFRDLNK	EQFNDFRDLNK	3	EQFNDFRDLNK3	7704.91	15686.9	9183.32
O35783	O35783	CALU_RAT	Calu	Calumenin	1	EQFVEFR	EQFVEFR	2	EQFVEFR2	2.77276e+06	3.1889e+06	2.99582e+06
Q9JLH7	Q9JLH7	CK5P3_RAT	Cdk5rap3	CDK5 regulatory subunit-associated protein 3	1	EQFYHSCK	EQFYHSC(UniMod:4)K	2	EQFYHSC(UniMod:4)K2	4429.32	9216.64	
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	EQGATVLCGGEPYAPEDPK	EQGATVLC(UniMod:4)GGEPYAPEDPK	3	EQGATVLC(UniMod:4)GGEPYAPEDPK3	36788.4	32864.9	25339.5
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	EQGATVLCGGEPYAPEDPKLK	EQGATVLC(UniMod:4)GGEPYAPEDPKLK	3	EQGATVLC(UniMod:4)GGEPYAPEDPKLK3	27029.3	18583.9	28332.7
Q05962	Q05962	ADT1_RAT	Slc25a4	ADP/ATP translocase 1	1	EQGFLSFWR	EQGFLSFWR	2	EQGFLSFWR2	556456	594227	606230
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	EQGILSPASELK	EQGILSPASELK	2	EQGILSPASELK2	20160.6	20033.8	16684.1
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	EQGKEVGETLLYYGCR	EQGKEVGETLLYYGC(UniMod:4)R	3	EQGKEVGETLLYYGC(UniMod:4)R3		7290.18	8963.68
Q4KLH3	Q4KLH3	OGRL1_RAT	Ogfrl1	Opioid growth factor receptor-like protein 1	1	EQGLNFYAK	EQGLNFYAK	2	EQGLNFYAK2	27466.6	32785.4	18442.4
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	EQGNIEEAVR	EQGNIEEAVR	2	EQGNIEEAVR2	10011.3	7447.03	8479.99
Q32PX6	Q32PX6	Q32PX6_RAT	Rhog	Ras homolog family member G	1	EQGQAPITPQQGQALAK	EQGQAPITPQQGQALAK	2	EQGQAPITPQQGQALAK2	38435.5	31116.1	30409.9
Q32PX6	Q32PX6	Q32PX6_RAT	Rhog	Ras homolog family member G	1	EQGQAPITPQQGQALAK	EQGQAPITPQQGQALAK	3	EQGQAPITPQQGQALAK3	30920.4	20647.5	36731.1
Q62636	Q62636;A0A8I6APM6;P62836	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	0	EQGQNLAR	EQGQNLAR	1	EQGQNLAR1	6282.7		3704.76
Q62636	Q62636;A0A8I6APM6;P62836	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	0	EQGQNLAR	EQGQNLAR	2	EQGQNLAR2	542421		345516
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	EQGSLLGK	EQGSLLGK	2	EQGSLLGK2	21750.4	24553.7	23567.4
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	EQGSSGLGSGSSGGGGSSSGLGSGYIGR	EQGSSGLGSGSSGGGGSSSGLGSGYIGR	3	EQGSSGLGSGSSGGGGSSSGLGSGYIGR3	19746.6	19946.7	25948.7
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	EQGVEEHETLLLR	EQGVEEHETLLLR	2	EQGVEEHETLLLR2	85432.9	59130.5	56507
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	EQGVEEHETLLLR	EQGVEEHETLLLR	3	EQGVEEHETLLLR3	756069	57657	883288
B2GV14	B2GV14	B2GV14_RAT	Txlna	Taxilin alpha	1	EQGVESPGAQPSSSPK	EQGVESPGAQPSSSPK	2	EQGVESPGAQPSSSPK2	5437.09	4040.72	2329.8
Q09073	A0A8I5Y643;A0A8I6GK78;Q09073	ADT2_RAT	Slc25a5	ADP/ATP translocase 2	0	EQGVLSFWR	EQGVLSFWR	2	EQGVLSFWR2	2.77645e+06	2.97427e+06	3.06081e+06
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	EQGVTFPSGEAQEQLIR	EQGVTFPSGEAQEQLIR	2	EQGVTFPSGEAQEQLIR2	28748.8	28581.5	23840
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	EQGWCEITAQLLALPEHDAR	EQGWC(UniMod:4)EITAQLLALPEHDAR	3	EQGWC(UniMod:4)EITAQLLALPEHDAR3	34820.8	29406	29701.1
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	EQGWLLVDLSEEYK	EQGWLLVDLSEEYK	2	EQGWLLVDLSEEYK2	14193.4	6871.03	5249.11
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	EQGWLLVDLSEEYKR	EQGWLLVDLSEEYKR	3	EQGWLLVDLSEEYKR3	11507.3	14676.1	6003.88
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	EQGYIFGDYIER	EQGYIFGDYIER	2	EQGYIFGDYIER2	637569	751894	645573
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	EQGYIFGDYIER	EQGYIFGDYIER	3	EQGYIFGDYIER3	859280	930134	852476
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	EQHAAELK	EQHAAELK	2	EQHAAELK2			3827.89
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	EQHDALEFFNSLVDSLDEALK	EQHDALEFFNSLVDSLDEALK	3	EQHDALEFFNSLVDSLDEALK3	11510.8		
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	EQHLRDEADLK	EQHLRDEADLK	2	EQHLRDEADLK2	3668.17	3344.12	
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	EQHLRDEADLK	EQHLRDEADLK	3	EQHLRDEADLK3	47662.3	40925.4	47312.2
Q91ZQ0	Q91ZQ0	VMP1_RAT	Vmp1	Vacuole membrane protein 1	1	EQHNGSFTDPSSVNEK	EQHNGSFTDPSSVNEK	3	EQHNGSFTDPSSVNEK3	7455.67	1790.76	7041.72
A0A8I5Y1T6	Q9JMB3;A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	0	EQHPDMSVTK	EQHPDMSVTK	2	EQHPDMSVTK2	27095.6	19949.6	18407.6
A0A8I5Y1T6	Q9JMB3;A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	0	EQHPDMSVTK	EQHPDMSVTK	3	EQHPDMSVTK3	145477	129858	136661
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	EQHPDMSVTR	EQHPDMSVTR	2	EQHPDMSVTR2	3333.4	1743.26	
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	EQHPDMSVTR	EQHPDMSVTR	3	EQHPDMSVTR3	27603.7	29286.8	26008.6
F1M784	F1M784	F1M784_RAT	Pik3ap1	Phosphoinositide-3-kinase adaptor protein 1	1	EQHPPHGEELYHTVEEDETFSVDLANR	EQHPPHGEELYHTVEEDETFSVDLANR	4	EQHPPHGEELYHTVEEDETFSVDLANR4		9921.5	16249.8
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	EQHSFELEER	EQHSFELEER	2	EQHSFELEER2	18418.4	20215.1	12734.1
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	EQHSFELEER	EQHSFELEER	3	EQHSFELEER3	153041	135981	163279
D3ZGS3	D3ZGS3	OCRL_RAT	Ocrl	Inositol polyphosphate 5-phosphatase OCRL	1	EQHVQDIIPINSHFR	EQHVQDIIPINSHFR	4	EQHVQDIIPINSHFR4	7486.77	4656.62	
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	EQIAPFHTEFTIK	EQIAPFHTEFTIK	3	EQIAPFHTEFTIK3	49265.7	57109.6	27761.9
Q5M9F6	Q5M9F6	Q5M9F6_RAT	Mthfs	5-formyltetrahydrofolate cyclo-ligase	1	EQICPQIPVDEHDMK	EQIC(UniMod:4)PQIPVDEHDMK	3	EQIC(UniMod:4)PQIPVDEHDMK3	13285.3	17156.1	6037.06
A0A8I6AIH6	A0A8I6AIH6	A0A8I6AIH6_RAT	Suclg2	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial	1	EQIDIFEGIK	EQIDIFEGIK	2	EQIDIFEGIK2	49358.1	27455.7	42580.3
P60192	P60192	SNAPN_RAT	Snapin	SNARE-associated protein Snapin	1	EQIDNLATELCR	EQIDNLATELC(UniMod:4)R	2	EQIDNLATELC(UniMod:4)R2	24261.5	24865.4	16007.4
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	EQIENYK	EQIENYK	2	EQIENYK2	46844.1	34346.6	39344.4
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	EQIENYKK	EQIENYKK	2	EQIENYKK2	6316.63		8613.14
P15650	P15650	ACADL_RAT	Acadl	Long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	EQIEQFIPQMTAGK	EQIEQFIPQMTAGK	2	EQIEQFIPQMTAGK2	97122.8	82883.1	91157.5
P15650	P15650	ACADL_RAT	Acadl	Long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	EQIEQFIPQMTAGK	EQIEQFIPQMTAGK	3	EQIEQFIPQMTAGK3	17616.8	17664.5	18159.2
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	EQIEWLIEHK	EQIEWLIEHK	3	EQIEWLIEHK3	6615.69	3567.74	5884.66
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	EQIGFTK	EQIGFTK	2	EQIGFTK2	84025.4	87505	89591.2
Q08834	B5DEZ3;Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	0	EQILDLSK	EQILDLSK	2	EQILDLSK2	112963	105657	90434.1
Q7TP47	Q7TP47	HNRPQ_RAT	Syncrip	Heterogeneous nuclear ribonucleoprotein Q	1	EQILEEFSK	EQILEEFSK	2	EQILEEFSK2	27334.7	28831.6	21470.1
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	EQILGDEAR	EQILGDEAR	2	EQILGDEAR2	54613.3	37273.9	28753.6
A0A8I5ZU29	A0A8I5ZU29;A0A8I6A7J6;A0A8L2UM24;B4F777	A0A8I5ZU29_RAT	LOC120097335	High mobility group nucleosome-binding domain-containing protein 5-like	0	EQINEDTEGDGGEK	EQINEDTEGDGGEK	2	EQINEDTEGDGGEK2	4797.47	2885.47	4349.91
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	EQINQLTSYIDASNVYGSTDHEAR	EQINQLTSYIDASNVYGSTDHEAR	3	EQINQLTSYIDASNVYGSTDHEAR3	24281.4	16150.5	18822.9
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	EQIQAEQCLK	EQIQAEQC(UniMod:4)LK	2	EQIQAEQC(UniMod:4)LK2	10101.4	8933.12	8064.14
A0A0G2JT44	A0A0G2JT44	A0A0G2JT44_RAT	Tmc6	Transmembrane channel-like protein	1	EQIRNEGEDK	EQIRNEGEDK	2	EQIRNEGEDK2			1908.65
Q63396	Q63396	TCP4_RAT	Sub1	Activated RNA polymerase II transcriptional coactivator p15	1	EQISDIDDAVR	EQISDIDDAVR	2	EQISDIDDAVR2	42322.5	38842.9	35992.9
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	EQISLAEK	EQISLAEK	1	EQISLAEK1	1154.12	2151.71	494.614
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	EQISLAEK	EQISLAEK	2	EQISLAEK2	314509	332250	296852
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	EQISVNSSVQEVPR	EQISVNSSVQEVPR	2	EQISVNSSVQEVPR2	42975.7	48352.3	46119
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	EQISVNSSVQEVPR	EQISVNSSVQEVPR	3	EQISVNSSVQEVPR3	14946.2	21803.6	20590.4
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	EQIVEGYYLK	EQIVEGYYLK	2	EQIVEGYYLK2	16290.2	21809.2	15712.6
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	EQIVGLSR	EQIVGLSR	2	EQIVGLSR2	50211.3	216688	53789.1
P24049	A0A8I6A6U8;P24049	RL17_RAT	Rpl17	Large ribosomal subunit protein uL22	0	EQIVPKPEEEVAQK	EQIVPKPEEEVAQK	3	EQIVPKPEEEVAQK3	47019.4	43578.1	71708
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	EQIYSSLDYGK	EQIYSSLDYGK	2	EQIYSSLDYGK2	26090.5	20587.4	26024.2
Q03344	A0A8I6AC26;Q03344	ATIF1_RAT	Atp5if1	ATPase inhibitor, mitochondrial	0	EQLAALK	EQLAALK	1	EQLAALK1	1604.16	3405.63	3066.91
Q03344	A0A8I6AC26;Q03344	ATIF1_RAT	Atp5if1	ATPase inhibitor, mitochondrial	0	EQLAALK	EQLAALK	2	EQLAALK2	982732	819669	874743
Q03344	A0A8I6AC26;Q03344	ATIF1_RAT	Atp5if1	ATPase inhibitor, mitochondrial	0	EQLAALKK	EQLAALKK	2	EQLAALKK2	140486	96109.2	107729
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	EQLAEHLSDCSLDEGWLLVCRPAEGGAR	EQLAEHLSDC(UniMod:4)SLDEGWLLVC(UniMod:4)RPAEGGAR	4	EQLAEHLSDC(UniMod:4)SLDEGWLLVC(UniMod:4)RPAEGGAR4	21124.4	17658.1	17973.4
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	EQLAELQNGFVR	EQLAELQNGFVR	2	EQLAELQNGFVR2	19994.2	20824.3	29103
D3ZW58	D3ZW58	D3ZW58_RAT	Golm2	Golgi membrane protein 2	1	EQLAELR	EQLAELR	2	EQLAELR2	9365.41	12027.3	16325.5
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	EQLAIAEFAR	EQLAIAEFAR	2	EQLAIAEFAR2	303747	333792	311912
Q6AYT3	Q6AYT3;A0A8I5YBA4	RTCB_RAT	Rtcb	RNA-splicing ligase RtcB homolog	0	EQLAQAMFDHIPVGVGSK	EQLAQAMFDHIPVGVGSK	3	EQLAQAMFDHIPVGVGSK3	19759.5	12486.2	23832
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	EQLAQAVAR	EQLAQAVAR	2	EQLAQAVAR2	18372.3	19114.4	12601.7
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	EQLDAHMELHSQLR	EQLDAHMELHSQLR	4	EQLDAHMELHSQLR4	3882.9	3112.11	
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	EQLDEVEK	EQLDEVEK	2	EQLDEVEK2	11566.2		21642.2
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	EQLDEVEKETR	EQLDEVEKETR	3	EQLDEVEKETR3	50252.1	47640.1	51737.2
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	EQLDMAGAR	EQLDMAGAR	2	EQLDMAGAR2	247296	230771	257346
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	EQLDPDELETITMHK	EQLDPDELETITMHK	2	EQLDPDELETITMHK2	11488.4	7518.18	8156.81
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	EQLDPDELETITMHK	EQLDPDELETITMHK	3	EQLDPDELETITMHK3	60304.2	59226.7	50915.5
D3ZII8	D3ZII8	D3ZII8_RAT	Smyd5	Histone-lysine N-trimethyltransferase SMYD5	1	EQLDTFIDQLYK	EQLDTFIDQLYK	2	EQLDTFIDQLYK2	6207.34	8474.6	4501.34
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	EQLEATCPQCHQTFCVR	EQLEATC(UniMod:4)PQC(UniMod:4)HQTFC(UniMod:4)VR	3	EQLEATC(UniMod:4)PQC(UniMod:4)HQTFC(UniMod:4)VR3	6815.1	3271.21	10788.2
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	EQLEHIR	EQLEHIR	2	EQLEHIR2	14370.6	15747	10957.5
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	EQLEQEK	EQLEQEK	1	EQLEQEK1	2644.88		1564.82
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	EQLEQEK	EQLEQEK	2	EQLEQEK2	42250.7	846.56	32462.7
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	EQLFAVTHDK	EQLFAVTHDK	2	EQLFAVTHDK2	5785.03	2803.08	2529.64
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	EQLFAVTHDK	EQLFAVTHDK	3	EQLFAVTHDK3	30085.5	20301.1	20238.7
P36372	P36372	TAP2_RAT	Tap2	Antigen peptide transporter 2	1	EQLFSSLLR	EQLFSSLLR	2	EQLFSSLLR2	25268.3	17555.4	13628.5
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	EQLGYIVFSGPR	EQLGYIVFSGPR	2	EQLGYIVFSGPR2	6072.13	13501.6	18859.6
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	EQLILEGLLGR	EQLILEGLLGR	2	EQLILEGLLGR2	57420	49911.4	47391.8
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	EQLIQDLQEAR	EQLIQDLQEAR	2	EQLIQDLQEAR2	30967.6	35907.2	33367.1
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	EQLIQSK	EQLIQSK	2	EQLIQSK2	27965.8	46071.1	37808.4
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	EQLKEELNENQSTPK	EQLKEELNENQSTPK	3	EQLKEELNENQSTPK3	8473.36	6823.29	9146.75
D3ZZ81	Q91Z79;D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	0	EQLLEREEEIAELK	EQLLEREEEIAELK	3	EQLLEREEEIAELK3	92875.1	79153.6	106135
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	EQLLLEELVSLVNQR	EQLLLEELVSLVNQR	2	EQLLLEELVSLVNQR2	17153.3		
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	EQLLLEELVSLVNQR	EQLLLEELVSLVNQR	3	EQLLLEELVSLVNQR3		8840.11	6861.01
Q05096	Q05096	MYO1B_RAT	Myo1b	Unconventional myosin-Ib	1	EQLLQSTPVLEAFGNAK	EQLLQSTPVLEAFGNAK	2	EQLLQSTPVLEAFGNAK2		1133.25	2598.66
Q9QWG5	Q9QWG5	INP4B_RAT	Inpp4b	Type II inositol 3,4-bisphosphate 4-phosphatase	1	EQLLSLSLR	EQLLSLSLR	2	EQLLSLSLR2		6651.98	10757.5
Q5RJK8	Q5RJK8	ACBD6_RAT	Acbd6	Acyl-CoA-binding domain-containing protein 6	1	EQLLYLYAR	EQLLYLYAR	2	EQLLYLYAR2	3736.71	9357.59	4785.22
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EQLMASDDFGR	EQLMASDDFGR	2	EQLMASDDFGR2	176969	169691	170989
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	EQLMASDDFGRDLASVQALLR	EQLMASDDFGRDLASVQALLR	3	EQLMASDDFGRDLASVQALLR3	23316.1	37399.9	26416.4
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	EQLMEENECLR	EQLMEENEC(UniMod:4)LR	2	EQLMEENEC(UniMod:4)LR2	17751.6	21789	17474.6
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	EQLMGHSEWDHK	EQLMGHSEWDHK	2	EQLMGHSEWDHK2	4228.26	4540.43	8380.05
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	EQLMGHSEWDHK	EQLMGHSEWDHK	3	EQLMGHSEWDHK3	169767	173710	199785
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	EQLMGHSEWDHKR	EQLMGHSEWDHKR	3	EQLMGHSEWDHKR3	28215.8	15435.4	20421.8
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	EQLMGHSEWDHKR	EQLMGHSEWDHKR	4	EQLMGHSEWDHKR4	31969.3	48357.5	69839.8
Q5M9G3	Q5M9G3	CAPR1_RAT	Caprin1	Caprin-1	1	EQLMREEAEQK	EQLMREEAEQK	3	EQLMREEAEQK3			12746.4
Q6MG06	Q6MG06	GNL1_RAT	Gnl1	Guanine nucleotide-binding protein-like 1	1	EQLMSQEER	EQLMSQEER	2	EQLMSQEER2	30099.9	25981.1	32596.5
Q3ZU82	Q3ZU82	GOGA5_RAT	Golga5	Golgin subfamily A member 5	1	EQLQDLQDQIAK	EQLQDLQDQIAK	2	EQLQDLQDQIAK2	10244.8	5807.43	7518.52
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	EQLQDMGLVDLFSPEK	EQLQDMGLVDLFSPEK	2	EQLQDMGLVDLFSPEK2	134082	131347	130392
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	EQLQDMGLVDLFSPEK	EQLQDMGLVDLFSPEK	3	EQLQDMGLVDLFSPEK3	69702.5	62239.1	52719
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	EQLQLLPLFFK	EQLQLLPLFFK	2	EQLQLLPLFFK2	4036.67	4442.86	
A0A8I5ZKY1	A0A8I5ZKY1	A0A8I5ZKY1_RAT	Rnf170	E3 ubiquitin-protein ligase RNF170	1	EQLQTEQDVPAPAR	EQLQTEQDVPAPAR	2	EQLQTEQDVPAPAR2	20930.7	13137.6	15054.6
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	EQLQTLIPYVLNPSK	EQLQTLIPYVLNPSK	2	EQLQTLIPYVLNPSK2	102607	93970.4	94099.4
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	EQLQTLIPYVLNPSK	EQLQTLIPYVLNPSK	3	EQLQTLIPYVLNPSK3	26121.7	30083.1	28148.8
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	EQLQVHIQTIGILVSEK	EQLQVHIQTIGILVSEK	3	EQLQVHIQTIGILVSEK3	4918.04	7704.44	10286.7
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	EQLSDMMMINK	EQLSDMMMINK	2	EQLSDMMMINK2	31274.5	30355.5	21158.3
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	EQLSEVEESGEDSQGGDPTETTQK	EQLSEVEESGEDSQGGDPTETTQK	3	EQLSEVEESGEDSQGGDPTETTQK3	10430.9	7588.92	20695.8
P53565	P53565	CUX1_RAT	Cux1	Homeobox protein cut-like 1	1	EQLSSANHSLQLASQIQK	EQLSSANHSLQLASQIQK	3	EQLSSANHSLQLASQIQK3	12006.2	10297.8	15392.3
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	EQLTALHEEGALAVYHAQLR	EQLTALHEEGALAVYHAQLR	3	EQLTALHEEGALAVYHAQLR3	4760.15	4533.68	4804.83
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	EQLTALHEEGALAVYHAQLR	EQLTALHEEGALAVYHAQLR	4	EQLTALHEEGALAVYHAQLR4	8489.7	5427.69	11199.4
Q6TUG0	Q6TUG0	DJB11_RAT	Dnajb11	DnaJ homolog subfamily B member 11	1	EQLTEEAK	EQLTEEAK	1	EQLTEEAK1	1061.93		694.204
Q6TUG0	Q6TUG0	DJB11_RAT	Dnajb11	DnaJ homolog subfamily B member 11	1	EQLTEEAK	EQLTEEAK	2	EQLTEEAK2	218761	202360	201979
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	EQLTFLAPLNSVFK	EQLTFLAPLNSVFK	2	EQLTFLAPLNSVFK2	70630.5	80135.1	89263.3
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	EQLTFLAPLNSVFK	EQLTFLAPLNSVFK	3	EQLTFLAPLNSVFK3	8388.1	8778.51	7053.04
F1LMI3	F1LMI3	F1LMI3_RAT	Cdh3	Cadherin 3	1	EQLTMIR	EQLTMIR	2	EQLTMIR2	13808.5	15934.1	22000.8
Q91ZW1	Q91ZW1	TFAM_RAT	Tfam	Transcription factor A, mitochondrial	1	EQLTPSQLMGLEK	EQLTPSQLMGLEK	2	EQLTPSQLMGLEK2	4453.56		
Q6AYC0	Q6AYC0	Q6AYC0_RAT	Haus4	HAUS augmin-like complex, subunit 4	1	EQLVLLEK	EQLVLLEK	2	EQLVLLEK2	8581.11	2800.23	1915.27
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	EQLWLANEGLITK	EQLWLANEGLITK	2	EQLWLANEGLITK2	32667.9	39736	38647.9
Q6MG88	Q6MG88	GPSM3_RAT	Gpsm3	G-protein-signaling modulator 3	1	EQLYSTILSHQCQR	EQLYSTILSHQC(UniMod:4)QR	3	EQLYSTILSHQC(UniMod:4)QR3	142376	114132	214413
Q6AY30	Q6AY30	SCPDL_RAT	Sccpdh	Saccharopine dehydrogenase-like oxidoreductase	1	EQMASEQSSR	EQMASEQSSR	2	EQMASEQSSR2			13088.1
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	EQMDQISESNHLIHLSNTNNVK	EQMDQISESNHLIHLSNTNNVK	4	EQMDQISESNHLIHLSNTNNVK4	6264.31	5643.58	9886.64
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	EQMEAEIAHLK	EQMEAEIAHLK	2	EQMEAEIAHLK2	1394.33	2630.26	3094.29
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	EQMEAEIAHLK	EQMEAEIAHLK	3	EQMEAEIAHLK3	13407.2	15993.4	22169.9
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	EQMEEVR	EQMEEVR	1	EQMEEVR1	300478	246085	261923
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	EQMEEVR	EQMEEVR	2	EQMEEVR2	233554	277428	277560
Q9JLT0	Q9JLT0	MYH10_RAT	Myh10	Myosin-10	1	EQMEKANAR	EQMEKANAR	2	EQMEKANAR2	5195.76	3926.74	4168.03
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	EQMILVK	EQMILVK	2	EQMILVK2	32833	30405.9	38403
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	EQMLEQK	EQMLEQK	2	EQMLEQK2	151035	136845	158348
D3ZRI9	D3ZRI9	D3ZRI9_RAT	Gan	Gigaxonin	1	EQMLNEPLVR	EQMLNEPLVR	2	EQMLNEPLVR2	34306.1	23478.1	14914.7
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	EQMPLTSPR	EQMPLTSPR	2	EQMPLTSPR2	125395	102511	110775
B5DF45	B5DF45	TRAF6_RAT	Traf6	TNF receptor-associated factor 6	1	EQMPNHYDLDCPTAPVPCTFSVFGCHEK	EQMPNHYDLDC(UniMod:4)PTAPVPC(UniMod:4)TFSVFGC(UniMod:4)HEK	4	EQMPNHYDLDC(UniMod:4)PTAPVPC(UniMod:4)TFSVFGC(UniMod:4)HEK4	5180.17	7027.33	5641.44
Q9QWG5	Q9QWG5	INP4B_RAT	Inpp4b	Type II inositol 3,4-bisphosphate 4-phosphatase	1	EQMSESILSFHIPK	EQMSESILSFHIPK	3	EQMSESILSFHIPK3	5454.72	3947.67	5940.79
Q09325	Q09325	MGAT1_RAT	Mgat1	Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	1	EQMVDSSKPELLYR	EQMVDSSKPELLYR	3	EQMVDSSKPELLYR3	16267	13501.5	28122.2
Q9EQT5	Q9EQT5	TINAL_RAT	Tinagl1	Tubulointerstitial nephritis antigen-like	1	EQNDEASPTPR	EQNDEASPTPR	2	EQNDEASPTPR2	2637.11		2557.04
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	EQNEACVQTYK	EQNEAC(UniMod:4)VQTYK	2	EQNEAC(UniMod:4)VQTYK2	54836.5	48647.1	51362.3
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	EQNEALNR	EQNEALNR	2	EQNEALNR2	200796	184739	148860
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	EQNILAQVFGILK	EQNILAQVFGILK	2	EQNILAQVFGILK2	5676.13		
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	EQNLQDIK	EQNLQDIK	2	EQNLQDIK2	117436	124694	117025
Q3T1I9	Q3T1I9	RPAP1_RAT	Rpap1	RNA polymerase II-associated protein 1	1	EQNPERPSVPVSK	EQNPERPSVPVSK	3	EQNPERPSVPVSK3	25700.2	19382.7	20794.5
Q6P767	Q6P767	PTTG_RAT	Pttg1ip	Pituitary tumor-transforming gene 1 protein-interacting protein	1	EQNPYEK	EQNPYEK	1	EQNPYEK1	2965.51	3207.77	
Q6P767	Q6P767	PTTG_RAT	Pttg1ip	Pituitary tumor-transforming gene 1 protein-interacting protein	1	EQNPYEK	EQNPYEK	2	EQNPYEK2	80475.1	74735.1	
Q6P767	Q6P767	PTTG_RAT	Pttg1ip	Pituitary tumor-transforming gene 1 protein-interacting protein	1	EQNPYEKF	EQNPYEKF	2	EQNPYEKF2	320124	357610	323151
Q792I0	Q9Z252;Q792I0;Q9Z250	LIN7C_RAT	Lin7c	Protein lin-7 homolog C	0	EQNSPIYISR	EQNSPIYISR	2	EQNSPIYISR2	56904	48350.9	57069.5
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	EQNTELAAELK	EQNTELAAELK	2	EQNTELAAELK2	6883.75	10732.8	11209.5
F1LXF5	F1LXF5	F1LXF5_RAT	Get4	Guided entry of tail-anchored proteins factor 4	1	EQNYCESR	EQNYC(UniMod:4)ESR	2	EQNYC(UniMod:4)ESR2			2872.36
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	EQNYSDDVLANMISEPR	EQNYSDDVLANMISEPR	3	EQNYSDDVLANMISEPR3	25537.5	23036.9	30873.6
D4AE80	D4AE80	D4AE80_RAT	Dcp1a	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	EQPAPMGLESEDTDK	EQPAPMGLESEDTDK	2	EQPAPMGLESEDTDK2	17094.5	22278.5	21557.2
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	EQPEKEPELQQYVPQLQNNTILR	EQPEKEPELQQYVPQLQNNTILR	3	EQPEKEPELQQYVPQLQNNTILR3	121937	88650	104204
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	EQPEKEPELQQYVPQLQNNTILR	EQPEKEPELQQYVPQLQNNTILR	4	EQPEKEPELQQYVPQLQNNTILR4	4237.55	3503.62	
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	EQPGVYTK	EQPGVYTK	2	EQPGVYTK2	186120	180283	192405
Q9Z2X5	Q9Z2X5	HOME3_RAT	Homer3	Homer protein homolog 3	1	EQPIFSTR	EQPIFSTR	2	EQPIFSTR2	34043.1	32209.6	34787
P05544	A0A0G2JSK1;P05544;P05545	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	EQPILSEFQEK	EQPILSEFQEK	2	EQPILSEFQEK2	1.54469e+06	1.3674e+06	1.44777e+06
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	EQPLDEELK	EQPLDEELK	2	EQPLDEELK2	219600	204082	184252
A1L1J9	A1L1J9	LMF2_RAT	Lmf2	Lipase maturation factor 2	1	EQPPTYLR	EQPPTYLR	2	EQPPTYLR2	314937	302871	328966
A0A0G2JTJ9	A0A0G2JTJ9	A0A0G2JTJ9_RAT	Tfcp2	Transcription factor CP2	1	EQPQQPQPQQK	EQPQQPQPQQK	2	EQPQQPQPQQK2	1509.76		2349.33
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	EQPSSIVHR	EQPSSIVHR	2	EQPSSIVHR2	242936	262212	205719
D3Z8I2	D3Z8I2	D3Z8I2_RAT	Susd3	Sushi domain containing 3	1	EQPVVTR	EQPVVTR	2	EQPVVTR2	25800.9	33694.7	35233.9
D3Z9L0	D3Z9L0	D3Z9L0_RAT	Agk	Acylglycerol kinase, mitochondrial	1	EQPVYAMTGLR	EQPVYAMTGLR	2	EQPVYAMTGLR2	26295.6	29562.7	27931.8
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	EQPWVSVQPR	EQPWVSVQPR	2	EQPWVSVQPR2	538158	621908	531387
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	EQPWVSVQPR	EQPWVSVQPR	3	EQPWVSVQPR3		11568.6	8358.95
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	EQQAQQEDPIER	EQQAQQEDPIER	2	EQQAQQEDPIER2	113580	110957	121603
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	EQQAQQEDPIER	EQQAQQEDPIER	3	EQQAQQEDPIER3	10986.8	17432.4	15553.2
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	EQQATVTSSIMQAMR	EQQATVTSSIMQAMR	2	EQQATVTSSIMQAMR2	9618.35	7298.17	6740.48
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	EQQAVSQLQQLLENQK	EQQAVSQLQQLLENQK	2	EQQAVSQLQQLLENQK2	8487.47	5472.04	10203.1
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	EQQAVSQLQQLLENQK	EQQAVSQLQQLLENQK	3	EQQAVSQLQQLLENQK3	7793.82	12411.9	16662.7
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	EQQCVIMAENSK	EQQC(UniMod:4)VIMAENSK	2	EQQC(UniMod:4)VIMAENSK2	1.28165e+06	1.04755e+06	1.09423e+06
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	EQQCVIMAENSK	EQQC(UniMod:4)VIMAENSK	3	EQQC(UniMod:4)VIMAENSK3	83534	77960.2	88248.2
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	EQQDLEFAK	EQQDLEFAK	2	EQQDLEFAK2	97774.2	122604	100886
Q63945	P80349;Q63945	SET_RAT	Set	Protein SET	0	EQQEAIEHIDEVQNEIDR	EQQEAIEHIDEVQNEIDR	3	EQQEAIEHIDEVQNEIDR3	10043.1		
Q63945	Q63945	SET_RAT	Set	Protein SET	1	EQQEAIEHIDEVQNEIDRLNEQASEEILK	EQQEAIEHIDEVQNEIDRLNEQASEEILK	4	EQQEAIEHIDEVQNEIDRLNEQASEEILK4	8878.78		
Q08415	Q08415	KAT1_RAT	Kyat1	Kynurenine--oxoglutarate transaminase 1	1	EQQHFGQPSSYFLQLPQAMELNR	EQQHFGQPSSYFLQLPQAMELNR	3	EQQHFGQPSSYFLQLPQAMELNR3	8778.44		4189.9
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	EQQIVIQSSGGLSK	EQQIVIQSSGGLSK	2	EQQIVIQSSGGLSK2	90819.4	73080.1	77434.9
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	EQQIVIQSSGGLSK	EQQIVIQSSGGLSK	3	EQQIVIQSSGGLSK3	4943.99	4127.9	
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	EQQLAEIETR	EQQLAEIETR	2	EQQLAEIETR2	36402.3	48624.7	41586.9
A0A8I5ZU93	A0A8I5ZU93	A0A8I5ZU93_RAT	Cops7a	COP9 signalosome subunit 7A	1	EQQLGLK	EQQLGLK	2	EQQLGLK2	47121.5	53183.5	58109.1
Q5BK48	Q5BK48	TTC5_RAT	Ttc5	Tetratricopeptide repeat protein 5	1	EQQLLEFLSR	EQQLLEFLSR	2	EQQLLEFLSR2	3900.31		6242.19
O54783	O54783	CHKB_RAT	Chkb	Choline/ethanolamine kinase	1	EQQLLFIR	EQQLLFIR	2	EQQLLFIR2	8358.16		11853.7
Q99P99	Q99P99	HDAC4_RAT	Hdac4	Histone deacetylase 4	1	EQQLQQELLALK	EQQLQQELLALK	2	EQQLQQELLALK2	5522.33	9115.55	5979.38
A0A8I6G4R8	A0A8I6G4R8	A0A8I6G4R8_RAT	Hdac5	Histone deacetylase	1	EQQLQQELLVLK	EQQLQQELLVLK	2	EQQLQQELLVLK2	3925.22	2494.02	7347.52
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	EQQLVGEK	EQQLVGEK	2	EQQLVGEK2	42336.7	32513	35693.3
P61621	A0A8I6AA70;P61621	S61A1_RAT	Sec61a1	Protein transport protein Sec61 subunit alpha isoform 1	0	EQQMVMR	EQQMVMR	2	EQQMVMR2	235671	216699	258330
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	EQQPSVTPGLGVMQVR	EQQPSVTPGLGVMQVR	2	EQQPSVTPGLGVMQVR2	41071	47389.9	29450.9
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	EQQPSVTPGLGVMQVR	EQQPSVTPGLGVMQVR	3	EQQPSVTPGLGVMQVR3	8514.7	7924.55	11296.2
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	EQQSHLSSIVTPEEQEFVNK	EQQSHLSSIVTPEEQEFVNK	3	EQQSHLSSIVTPEEQEFVNK3	15504.2	16211.6	
A0A0G2K6T9	A0A0G2K6T9	A0A0G2K6T9_RAT	Pcdh1	Protocadherin 1	1	EQQSTYTFQLK	EQQSTYTFQLK	2	EQQSTYTFQLK2	3084.06		
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	EQQVADLQLK	EQQVADLQLK	2	EQQVADLQLK2	9220.02	11018.8	10285.7
F1MAD3	F1MAD3	F1MAD3_RAT	Pkd1	Polycystin 1, transient receptor potential channel interacting	1	EQQVHVVQSEATTCR	EQQVHVVQSEATTC(UniMod:4)R	3	EQQVHVVQSEATTC(UniMod:4)R3	2653.65	4185.25	3913.03
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	EQQVQALQQHVQLLMDK	EQQVQALQQHVQLLMDK	3	EQQVQALQQHVQLLMDK3	18282.1	20597.7	15544.5
D3ZZA8	D3ZZA8	D3ZZA8_RAT	Sec24a	SEC24 homolog A, COPII coat complex component	1	EQRPFFPILYVIR	EQRPFFPILYVIR	3	EQRPFFPILYVIR3	2334.55	3444.4	3439.01
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	EQSEAELQTVR	EQSEAELQTVR	2	EQSEAELQTVR2		3535.85	3492.53
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	EQSELADLAEHIQQK	EQSELADLAEHIQQK	3	EQSELADLAEHIQQK3	22426.2	30897.2	22174.5
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	EQSELVAQALK	EQSELVAQALK	2	EQSELVAQALK2	25082.1	25374	12773.7
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	EQSFTIK	EQSFTIK	2	EQSFTIK2	184249	168490	164800
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	EQSFTIKPVGFK	EQSFTIKPVGFK	2	EQSFTIKPVGFK2	532505	495828	560034
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	EQSFTIKPVGFK	EQSFTIKPVGFK	3	EQSFTIKPVGFK3	73103	64391.7	9.78485e+06
P17955	P17955	NUP62_RAT	Nup62	Nuclear pore glycoprotein p62	1	EQSGTIYLQHADEEREK	EQSGTIYLQHADEEREK	4	EQSGTIYLQHADEEREK4	11045.8	5560.61	5812.24
B4F785	B4F785	EGFLA_RAT	Egflam	Pikachurin	1	EQSHNVPVGQDTLITEEVIGDLKPGTEYR	EQSHNVPVGQDTLITEEVIGDLKPGTEYR	4	EQSHNVPVGQDTLITEEVIGDLKPGTEYR4	4979.38	5595.16	8160.28
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	EQSICAAEEQPAEDGQSDANK	EQSIC(UniMod:4)AAEEQPAEDGQSDANK	3	EQSIC(UniMod:4)AAEEQPAEDGQSDANK3	4608.38	4980.87	5910.23
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	EQSILELGSLLAK	EQSILELGSLLAK	2	EQSILELGSLLAK2	144680	166969	170608
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	EQSILELGSLLAK	EQSILELGSLLAK	3	EQSILELGSLLAK3	2731.1	2956.14	3955.37
P49616	P49616	UPAR_RAT	Plaur	Urokinase plasminogen activator surface receptor	1	EQSLQCR	EQSLQC(UniMod:4)R	2	EQSLQC(UniMod:4)R2	14611.6		12212.6
Q66H63	Q66H63	GDAP2_RAT	Gdap2	Ganglioside-induced differentiation-associated-protein 2	1	EQSMSSVGFCVINSAK	EQSMSSVGFC(UniMod:4)VINSAK	2	EQSMSSVGFC(UniMod:4)VINSAK2	3130.46	4142.63	5070.78
Q68FW7	Q68FW7	SYTM_RAT	Tars2	Threonine--tRNA ligase, mitochondrial	1	EQSQMSVNVR	EQSQMSVNVR	2	EQSQMSVNVR2	4764.34	3412.97	5914.79
F7FH41	F7FH41	F7FH41_RAT	Csnk2a2	Casein kinase 2 alpha 2	1	EQSQPCAENTVLSSGLTAAR	EQSQPC(UniMod:4)AENTVLSSGLTAAR	3	EQSQPC(UniMod:4)AENTVLSSGLTAAR3	11702.8	9902.96	5319.04
A0A8I5ZQ72	A0A8I5ZQ72	A0A8I5ZQ72_RAT	Zc3h12c	Zinc finger CCCH type containing 12C	1	EQSRPDALITDQEILR	EQSRPDALITDQEILR	3	EQSRPDALITDQEILR3	6008.02	5408.49	4039.24
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	EQSTHPGDGMKPSLGSLK	EQSTHPGDGMKPSLGSLK	3	EQSTHPGDGMKPSLGSLK3	28303.3	27473.9	21759.5
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	EQSTHPGDGMKPSLGSLK	EQSTHPGDGMKPSLGSLK	4	EQSTHPGDGMKPSLGSLK4	62775.1	45215.1	54214.9
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	EQSVLFEVPK	EQSVLFEVPK	2	EQSVLFEVPK2	575692	599824	592848
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	EQSVSWVSLEEAEPIPGIHWGVR	EQSVSWVSLEEAEPIPGIHWGVR	3	EQSVSWVSLEEAEPIPGIHWGVR3	107265	104347	72111.5
G3V8G2	G3V8G2	G3V8G2_RAT	Psmd5	26S proteasome non-ATPase regulatory subunit 5	1	EQTALCVSILER	EQTALC(UniMod:4)VSILER	2	EQTALC(UniMod:4)VSILER2	13183.8	38668.7	17556.3
Q01460	Q01460	DIAC_RAT	Ctbs	Di-N-acetylchitobiase	1	EQTEEMWGALRPR	EQTEEMWGALRPR	3	EQTEEMWGALRPR3	31856.6	18659	21563.2
Q68FX0	Q68FX0	IDH3B_RAT	Idh3B	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	EQTEGEYSSLEHESAR	EQTEGEYSSLEHESAR	2	EQTEGEYSSLEHESAR2	1662.89	1988.68	1318.86
Q68FX0	Q68FX0	IDH3B_RAT	Idh3B	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	EQTEGEYSSLEHESAR	EQTEGEYSSLEHESAR	3	EQTEGEYSSLEHESAR3	83884.6	108866	98632.6
P0C548	P0C548	PLPL2_RAT	Pnpla2	Patatin-like phospholipase domain-containing protein 2	1	EQTGSICQYLVMR	EQTGSIC(UniMod:4)QYLVMR	2	EQTGSIC(UniMod:4)QYLVMR2	9600.2		13115.9
D3ZXF9	D3ZXF9	D3ZXF9_RAT	Mrpl12	Mitochondrial ribosomal protein L12	1	EQTHFTVR	EQTHFTVR	2	EQTHFTVR2	7263.35	8058.98	3622.88
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	EQTLGTATVCLR	EQTLGTATVC(UniMod:4)LR	2	EQTLGTATVC(UniMod:4)LR2	118479	110464	116206
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	EQTLISMPYHVCTLK	EQTLISMPYHVC(UniMod:4)TLK	3	EQTLISMPYHVC(UniMod:4)TLK3	3884.27	1379.47	
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	EQTLTTVQTEMEEQER	EQTLTTVQTEMEEQER	2	EQTLTTVQTEMEEQER2	5440.44	2285.84	
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	EQTLTTVQTEMEEQER	EQTLTTVQTEMEEQER	3	EQTLTTVQTEMEEQER3	2790.79	2185.67	2158.28
D3ZUV2	D3ZUV2	D3ZUV2_RAT	Mib1	RING-type E3 ubiquitin transferase	1	EQTMCPVCLDR	EQTMC(UniMod:4)PVC(UniMod:4)LDR	2	EQTMC(UniMod:4)PVC(UniMod:4)LDR2	6709.36		3373.88
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	EQTPQEEGDVPR	EQTPQEEGDVPR	2	EQTPQEEGDVPR2	6769.3	2967.28	3872.27
Q68FP9	Q68FP9	COG6_RAT	Cog6	Conserved oligomeric Golgi complex subunit 6	1	EQTQDLIVK	EQTQDLIVK	2	EQTQDLIVK2	17832.1	16310.6	15448.2
Q99MB4	Q99MB4	ZNG1_RAT	Zng1	Zinc-regulated GTPase metalloprotein activator 1	1	EQTTAPGQDGACPPH	EQTTAPGQDGAC(UniMod:4)PPH	2	EQTTAPGQDGAC(UniMod:4)PPH2	10613.8	8207.64	8960.84
Q03346	Q03346	MPPB_RAT	Pmpcb	Mitochondrial-processing peptidase subunit beta	1	EQTVYYAK	EQTVYYAK	2	EQTVYYAK2	27268.2	21610.8	30440
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	EQVAAMQAGLLK	EQVAAMQAGLLK	2	EQVAAMQAGLLK2	29094.5	29664.3	36212.4
P34058	A0A8I6GLF3;P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	EQVANSAFVER	EQVANSAFVER	2	EQVANSAFVER2	2.18097e+06	2.66089e+06	2.22442e+06
P34058	A0A8I6GLF3;P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	EQVANSAFVER	EQVANSAFVER	3	EQVANSAFVER3	9414.92	16391.4	46096.1
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	EQVDPLQVK	EQVDPLQVK	2	EQVDPLQVK2	46333.1	53869.7	42184.1
Q5M9G9	Q5M9G9	FAKD4_RAT	Tbrg4	FAST kinase domain-containing protein 4	1	EQVFTPYPEHQEVDYLIEK	EQVFTPYPEHQEVDYLIEK	3	EQVFTPYPEHQEVDYLIEK3	16081.9	26002.4	28661.5
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	EQVGDQYQTVR	EQVGDQYQTVR	2	EQVGDQYQTVR2	11954.8	5447.89	8483.34
Q4KMA2	Q4KMA2	RD23B_RAT	Rad23b	UV excision repair protein RAD23 homolog B	1	EQVIAALR	EQVIAALR	2	EQVIAALR2	39486.2	27927.6	25694.6
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	EQVLETADRELGEAK	EQVLETADRELGEAK	3	EQVLETADRELGEAK3	14008.5	13818.4	22648.7
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	EQVLETVK	EQVLETVK	2	EQVLETVK2	70598.8	66157.8	77498.6
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	EQVLSDTMSLENSR	EQVLSDTMSLENSR	2	EQVLSDTMSLENSR2	5861.01	3581.67	4258.78
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	EQVSDLDK	EQVSDLDK	2	EQVSDLDK2	9186.87	13894.1	
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	EQVSEELVR	EQVSEELVR	2	EQVSEELVR2	38027.2	30997.9	26097.7
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	EQVTEAFR	EQVTEAFR	2	EQVTEAFR2	44492.4	34155.7	42002
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	EQVTLLEAR	EQVTLLEAR	2	EQVTLLEAR2	67547.6	75034.7	72353.9
P37377	P37377	SYUA_RAT	Snca	Alpha-synuclein	1	EQVTNVGGAVVTGVTAVAQK	EQVTNVGGAVVTGVTAVAQK	3	EQVTNVGGAVVTGVTAVAQK3	3008.36		5235.45
Q6AYB4	Q6AYB4	HSP7E_RAT	Hspa14	Heat shock 70 kDa protein 14	1	EQVVGLAAK	EQVVGLAAK	2	EQVVGLAAK2	9803.13	10471.4	4910.35
P17046	P17046	LAMP2_RAT	Lamp2	Lysosome-associated membrane glycoprotein 2	1	EQVVSVSR	EQVVSVSR	2	EQVVSVSR2	303865	284521	366187
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	EQVYTSK	EQVYTSK	2	EQVYTSK2	92336.8	103371	77286.9
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EQWLNNMQIPEK	EQWLNNMQIPEK	2	EQWLNNMQIPEK2	148312	155561	175791
F1MA46	F1MA46	F1MA46_RAT	Pcdh12	Protocadherin 12	1	EQWPTYTLTVFAQDQGPQALSAEK	EQWPTYTLTVFAQDQGPQALSAEK	3	EQWPTYTLTVFAQDQGPQALSAEK3	10859.5	8002.44	5534.13
P00787	P00787	CATB_RAT	Ctsb	Cathepsin B	1	EQWSNCPTIAQIR	EQWSNC(UniMod:4)PTIAQIR	2	EQWSNC(UniMod:4)PTIAQIR2	38200.7	42820	49822.8
P00787	P00787	CATB_RAT	Ctsb	Cathepsin B	1	EQWSNCPTIAQIR	EQWSNC(UniMod:4)PTIAQIR	3	EQWSNC(UniMod:4)PTIAQIR3	6894.88	10894.6	8196.7
F7FMS0	F7FMS0	F7FMS0_RAT	Mst1	Macrophage stimulating 1	1	EQWVLTAR	EQWVLTAR	2	EQWVLTAR2	20559.9	16266.7	18962.4
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	EQWWLNLR	EQWWLNLR	2	EQWWLNLR2	30465.1	41012.3	35688.8
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	EQYAASLAQSEAK	EQYAASLAQSEAK	2	EQYAASLAQSEAK2	27624.4	32509.5	27663.9
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	EQYEGLQDR	EQYEGLQDR	2	EQYEGLQDR2	17854.9	21839.8	20869.9
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	EQYELVHR	EQYELVHR	2	EQYELVHR2	47633.2	45862.3	46331.2
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	EQYFIPGTEDYHLNSECTSDVACPHK	EQYFIPGTEDYHLNSEC(UniMod:4)TSDVAC(UniMod:4)PHK	4	EQYFIPGTEDYHLNSEC(UniMod:4)TSDVAC(UniMod:4)PHK4	3446.27	6496.23	5804.42
Q641X7	Q641X7	FBX25_RAT	Fbxo25	F-box only protein 25	1	EQYGDTLHFCR	EQYGDTLHFC(UniMod:4)R	3	EQYGDTLHFC(UniMod:4)R3	4260.91	4434.61	5526.66
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	EQYLMAISDKDQQLGHLQNLLR	EQYLMAISDKDQQLGHLQNLLR	3	EQYLMAISDKDQQLGHLQNLLR3	4140.34		4014.74
P55280	F1LR98;P55280;D3ZFQ5	CADH6_RAT	Cdh6	Cadherin-6	0	EQYQVVIQAK	EQYQVVIQAK	2	EQYQVVIQAK2	5618.78	3909.68	6453.94
A0A8I5ZTN5	A0A8I5ZTN5	A0A8I5ZTN5_RAT	Adsl	Adenylosuccinate lyase	1	ERADLPTLGFTHFQPAQLTTVGK	ERADLPTLGFTHFQPAQLTTVGK	4	ERADLPTLGFTHFQPAQLTTVGK4	5443.07	5569.6	
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	ERAEQLSQENEK	ERAEQLSQENEK	2	ERAEQLSQENEK2	4564.08		4737.78
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	ERAVELLR	ERAVELLR	2	ERAVELLR2	2742.18	4093.03	1640.19
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	ERDDILR	ERDDILR	2	ERDDILR2	15941.7	6426.62	14553.8
F7EUW3	F7EUW3	F7EUW3_RAT	C2cd2l	C2CD2-like	1	ERDEEQPELSTVEELIK	ERDEEQPELSTVEELIK	3	ERDEEQPELSTVEELIK3	14318	14959	19284.3
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	ERDELQEGLSR	ERDELQEGLSR	3	ERDELQEGLSR3	63998.4	78312.8	90519.5
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	ERDEMEIHLQSLK	ERDEMEIHLQSLK	3	ERDEMEIHLQSLK3	2895.51		
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	ERDEMEIHLQSLK	ERDEMEIHLQSLK	4	ERDEMEIHLQSLK4	6570.27	3947.97	10793.5
Q3B8Q0	Q3B8Q0;Q66HR2	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	0	ERDFYFGK	ERDFYFGK	2	ERDFYFGK2	37807	33598.9	31942.5
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	ERDGGSGVPPAGPGAASEALAVLTSFGR	ERDGGSGVPPAGPGAASEALAVLTSFGR	3	ERDGGSGVPPAGPGAASEALAVLTSFGR3	31026.6	40911.9	38408.1
D3ZD05	D3ZD05	KANK2_RAT	Kank2	KN motif and ankyrin repeat domain-containing protein 2	1	ERDLGIPDGEAALVAK	ERDLGIPDGEAALVAK	3	ERDLGIPDGEAALVAK3	3292.4	5142.63	
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	ERDQDDHIDWLLEK	ERDQDDHIDWLLEK	3	ERDQDDHIDWLLEK3	4282.24	2706.75	1515.9
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	ERDQDDHIDWLLEK	ERDQDDHIDWLLEK	4	ERDQDDHIDWLLEK4	4411.38	7370.4	4049.12
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	ERDQLLHILFNLIK	ERDQLLHILFNLIK	3	ERDQLLHILFNLIK3	5381.08	2191.99	3864.73
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	ERDSEGCWITYTLQQK	ERDSEGC(UniMod:4)WITYTLQQK	3	ERDSEGC(UniMod:4)WITYTLQQK3	20769.2	24959.4	25526.8
Q5PQS6	Q5PQS6	SMG9_RAT	Smg9	Nonsense-mediated mRNA decay factor SMG9	1	ERDYIAPWER	ERDYIAPWER	3	ERDYIAPWER3	2879.38	5861.45	4221.76
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	EREAHPMPLEAEAPGVNLGTLPEGR	EREAHPMPLEAEAPGVNLGTLPEGR	4	EREAHPMPLEAEAPGVNLGTLPEGR4	7234.99	12576.7	11749.7
D3ZTC4	D3ZTC4	D3ZTC4_RAT	Ccdc88b	Coiled-coil domain containing 88B	1	EREALAEALAAAGR	EREALAEALAAAGR	3	EREALAEALAAAGR3	5442.37	4060.03	4969.59
F1M7Q7	F1M7Q7	F1M7Q7_RAT	Otud4	ubiquitinyl hydrolase 1	1	EREAVSAEPEPK	EREAVSAEPEPK	3	EREAVSAEPEPK3	5741.4	3642.99	3537.52
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	ERECQALVQQALHR	EREC(UniMod:4)QALVQQALHR	3	EREC(UniMod:4)QALVQQALHR3	2547.01	2595.16	814.376
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	EREDEELSCDHYCHNYIGGYYCSCR	EREDEELSC(UniMod:4)DHYC(UniMod:4)HNYIGGYYC(UniMod:4)SC(UniMod:4)R	4	EREDEELSC(UniMod:4)DHYC(UniMod:4)HNYIGGYYC(UniMod:4)SC(UniMod:4)R4	2824.05	5603.34	4835.49
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	EREDLYAK	EREDLYAK	2	EREDLYAK2	5044.62	3987.34	
F1LLW8	F1LLW8	F1LLW8_RAT	Ids	Iduronate 2-sulfatase	1	EREDVQALNISVPYGPIPVDFQR	EREDVQALNISVPYGPIPVDFQR	3	EREDVQALNISVPYGPIPVDFQR3	447639	405810	285021
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	EREDYSPLIR	EREDYSPLIR	3	EREDYSPLIR3	25836.9	21296.6	17671.5
D4A1A5	D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	EREEAWVK	EREEAWVK	2	EREEAWVK2	2335.56	1935.5	5828.77
Q5RKH6	Q5RKH6	OS9_RAT	Os9	Protein OS-9	1	EREEETPAYQGPGIPELLSPMR	EREEETPAYQGPGIPELLSPMR	3	EREEETPAYQGPGIPELLSPMR3	11669.9	8785.56	11593.4
Q62785	Q62785	HAP28_RAT	Pdap1	28 kDa heat- and acid-stable phosphoprotein	1	EREEIEK	EREEIEK	2	EREEIEK2			27165.6
D3ZGJ0	D3ZGJ0	D3ZGJ0_RAT	Dhx32	DEAH-box helicase 32 (putative)	1	EREELPIWK	EREELPIWK	3	EREELPIWK3	12157	10349.4	11236.6
A0A8I5ZMG6	A0A8I5ZMG6	A0A8I5ZMG6_RAT	Ppp2r5e	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	EREELWK	EREELWK	2	EREELWK2	5710.64		4930.85
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	EREHLEIELEK	EREHLEIELEK	3	EREHLEIELEK3	5784.83	7212.99	
A0A8I5ZZG2	A0A8I5ZZG2	A0A8I5ZZG2_RAT	Reep3	Receptor expression-enhancing protein	1	EREIDDYIVQAK	EREIDDYIVQAK	3	EREIDDYIVQAK3	19078.5	26700.4	19625.4
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	EREIQQQMESR	EREIQQQMESR	3	EREIQQQMESR3	2829.04	4667.49	4531.63
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	ERELEEAR	ERELEEAR	2	ERELEEAR2	32264		31103.3
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	ERELEEARK	ERELEEARK	2	ERELEEARK2			9658.34
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	ERELEEARK	ERELEEARK	3	ERELEEARK3			9477.49
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	ERELELQK	ERELELQK	2	ERELELQK2	12091.5	15425.7	13228.5
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	ERELLGK	ERELLGK	2	ERELLGK2	63787	45770.5	55169.2
A0A8J8YHW4	A0A8J8YHW4	A0A8J8YHW4_RAT	Clk2	Secretory carrier-associated membrane protein	1	ERELQHVALGGAGTR	ERELQHVALGGAGTR	3	ERELQHVALGGAGTR3	49086.2	50232.3	47863.2
A0A8J8YHW4	A0A8J8YHW4	A0A8J8YHW4_RAT	Clk2	Secretory carrier-associated membrane protein	1	ERELQHVALGGAGTR	ERELQHVALGGAGTR	4	ERELQHVALGGAGTR4	51395.9	62478.4	54331.8
A0A8I6GL39	A0A8I6GL39	A0A8I6GL39_RAT	Scamp2	Secretory carrier-associated membrane protein	1	ERELQNTAANLHVR	ERELQNTAANLHVR	3	ERELQNTAANLHVR3	17469.2	18485.3	16487.4
A0A8I6GL39	A0A8I6GL39	A0A8I6GL39_RAT	Scamp2	Secretory carrier-associated membrane protein	1	ERELQNTAANLHVR	ERELQNTAANLHVR	4	ERELQNTAANLHVR4	48363.6	48115.5	42725.8
P56603	P56603	SCAM1_RAT	Scamp1	Secretory carrier-associated membrane protein 1	1	EREMQNLSQHGR	EREMQNLSQHGR	3	EREMQNLSQHGR3	33925	22854.6	41159
Q62931	Q62931	GOSR1_RAT	Gosr1	Golgi SNAP receptor complex member 1	1	ERENLMGSVR	ERENLMGSVR	3	ERENLMGSVR3	53160.5	68542.6	66812.7
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	EREPGGELLAHR	EREPGGELLAHR	3	EREPGGELLAHR3	14830.8	10979.2	19606.3
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	EREPGGELLAHRF	EREPGGELLAHRF	3	EREPGGELLAHRF3	5517.69	7520.98	
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	EREPSAVAHVVVK	EREPSAVAHVVVK	3	EREPSAVAHVVVK3	5634	7313.47	14680.5
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	EREQQDLEFAK	EREQQDLEFAK	2	EREQQDLEFAK2	2632.4	5071.25	
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	EREQQDLEFAK	EREQQDLEFAK	3	EREQQDLEFAK3	30556.7	34554.8	38768.5
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	EREVDYDSDMPR	EREVDYDSDMPR	3	EREVDYDSDMPR3	13961.3	13217.1	21262
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	EREVDYDSDMPRK	EREVDYDSDMPRK	3	EREVDYDSDMPRK3	3209.01	11773.1	4592.37
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	EREVDYDSDMPRK	EREVDYDSDMPRK	4	EREVDYDSDMPRK4	5256.03	12672.1	7480.33
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	ERFGIDDQDFQNSLTR	ERFGIDDQDFQNSLTR	3	ERFGIDDQDFQNSLTR3	72734.4	18010.7	79285.4
O88377	O88377	PI42B_RAT	Pip4k2b	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta	1	ERFGIDDQDYQNSVTR	ERFGIDDQDYQNSVTR	3	ERFGIDDQDYQNSVTR3	28470.3	17094.3	38889.7
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	ERFQNLDK	ERFQNLDK	2	ERFQNLDK2	10042.2	10321.1	10117.6
Q6IN36	Q6IN36	WIPF1_RAT	Wipf1	WAS/WASL-interacting protein family member 1	1	ERGAPPLPPIPR	ERGAPPLPPIPR	3	ERGAPPLPPIPR3	7670.2	14270.4	10466.7
B1PLB1	B1PLB1	B1PLB1_RAT	Cd34	CD34 molecule	1	ERGEELMQILCK	ERGEELMQILC(UniMod:4)K	3	ERGEELMQILC(UniMod:4)K3	106670	98467.7	103029
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	ERGETQNILQK	ERGETQNILQK	2	ERGETQNILQK2	10216.8	9464.64	8712.34
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	ERGETQNILQK	ERGETQNILQK	3	ERGETQNILQK3	76921	93074.5	84908.9
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	ERGHMLENHVER	ERGHMLENHVER	2	ERGHMLENHVER2	71099.6		72191.8
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	ERGHMLENHVER	ERGHMLENHVER	3	ERGHMLENHVER3	1.10729e+06		1.28416e+06
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	ERGHMLENHVERLWAYLTIQELLAK	ERGHMLENHVERLWAYLTIQELLAK	4	ERGHMLENHVERLWAYLTIQELLAK4	22069.4	8228.05	7098.55
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	ERGLQPEYEAQVK	ERGLQPEYEAQVK	3	ERGLQPEYEAQVK3	3061.12	1540.32	2442.4
P14270	P14270;P14646;P54748	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	0	ERGMEISPMCDK	ERGMEISPMC(UniMod:4)DK	3	ERGMEISPMC(UniMod:4)DK3			4658.45
A0A8I6AT07	M0R4Q5;A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	0	ERGPSAAEVFK	ERGPSAAEVFK	3	ERGPSAAEVFK3	3526.45	3089	4782.96
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	ERGQVFSVLTQLGASAMLVR	ERGQVFSVLTQLGASAMLVR	3	ERGQVFSVLTQLGASAMLVR3	7967.41		
A0A8I5ZZG2	A0A8I5ZZG2	A0A8I5ZZG2_RAT	Reep3	Receptor expression-enhancing protein	1	ERGYETMVNFGR	ERGYETMVNFGR	3	ERGYETMVNFGR3	9283.46	9502.94	13021.1
P62703	D3ZX01;P62703	RS4X_RAT	Rps4x	Small ribosomal subunit protein eS4	0	ERHPGSFDVVHVK	ERHPGSFDVVHVK	2	ERHPGSFDVVHVK2	4409.25	2032.27	
P62703	D3ZX01;P62703	RS4X_RAT	Rps4x	Small ribosomal subunit protein eS4	0	ERHPGSFDVVHVK	ERHPGSFDVVHVK	3	ERHPGSFDVVHVK3	30853.5	28053.5	23988.7
A0A8I6A5J1	A0A8I6A5J1	A0A8I6A5J1_RAT	Nars2	asparagine--tRNA ligase	1	ERHPLEYLR	ERHPLEYLR	3	ERHPLEYLR3	15698.7	4911.17	
P15589	P15589	STS_RAT	Sts	Steryl-sulfatase	1	ERHPLTPETEPR	ERHPLTPETEPR	3	ERHPLTPETEPR3	6060.92	9757.65	5817.19
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	ERIEIEQNYAK	ERIEIEQNYAK	2	ERIEIEQNYAK2	2376.31	3554.3	
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	ERIEIEQNYAK	ERIEIEQNYAK	3	ERIEIEQNYAK3	10550	58873	54644.8
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ERIPEALAGPPSDFGLFLSDDDPK	ERIPEALAGPPSDFGLFLSDDDPK	3	ERIPEALAGPPSDFGLFLSDDDPK3	388283	397335	384481
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ERIPEALAGPPSDFGLFLSDDDPK	ERIPEALAGPPSDFGLFLSDDDPK	4	ERIPEALAGPPSDFGLFLSDDDPK4	27298.6	50138.4	30185
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ERIPEALAGPPSDFGLFLSDDDPKK	ERIPEALAGPPSDFGLFLSDDDPKK	3	ERIPEALAGPPSDFGLFLSDDDPKK3	91491.4	60896	79071.2
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ERIPEALAGPPSDFGLFLSDDDPKK	ERIPEALAGPPSDFGLFLSDDDPKK	4	ERIPEALAGPPSDFGLFLSDDDPKK4	1.34649e+06	1.27232e+06	1.22265e+06
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	ERLDGENIYIR	ERLDGENIYIR	3	ERLDGENIYIR3	12231.1	17096.2	29150
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	ERLDQPMTEIVSR	ERLDQPMTEIVSR	3	ERLDQPMTEIVSR3	26640.9	22104.4	29827.5
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	ERLEEAAAPGAR	ERLEEAAAPGAR	3	ERLEEAAAPGAR3	22996.2	17832	29740.5
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	ERLESLNIQR	ERLESLNIQR	3	ERLESLNIQR3	4335.16	13898.6	8613.06
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	ERLGPLVEQGR	ERLGPLVEQGR	2	ERLGPLVEQGR2	3100.03	5829.87	
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	ERLGPLVEQGR	ERLGPLVEQGR	3	ERLGPLVEQGR3	446903	889110	1.04757e+06
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	ERLGPLVEQGRQR	ERLGPLVEQGRQR	4	ERLGPLVEQGRQR4	30427.4	23264	53278.9
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	ERMEPTYQLSR	ERMEPTYQLSR	2	ERMEPTYQLSR2	4407.18	3466.14	3500.61
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	ERMEPTYQLSR	ERMEPTYQLSR	3	ERMEPTYQLSR3	63995.8	60313.5	66493.6
Q62812	Q63862;Q62812	MYH9_RAT	Myh9	Myosin-9	0	ERNTDQASMPDNTAAQK	ERNTDQASMPDNTAAQK	2	ERNTDQASMPDNTAAQK2	47647.5	49549	17369.9
Q62812	Q63862;Q62812	MYH9_RAT	Myh9	Myosin-9	0	ERNTDQASMPDNTAAQK	ERNTDQASMPDNTAAQK	3	ERNTDQASMPDNTAAQK3	597774	835101	693632
F1LNF0	F1LNF0	F1LNF0_RAT	Myh14	Myosin heavy chain 14	1	ERNTDQATMPDNTAAQK	ERNTDQATMPDNTAAQK	3	ERNTDQATMPDNTAAQK3	3875.54	5683.28	30162.2
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	ERPAAAVSAPCAAAEDAAILYSR	ERPAAAVSAPC(UniMod:4)AAAEDAAILYSR	3	ERPAAAVSAPC(UniMod:4)AAAEDAAILYSR3	35147.5	31042.8	30980.3
A4GW50	A4GW50	A4GW50_RAT	Stk38l	Serine/threonine kinase 38 like	1	ERPAAIPIEIR	ERPAAIPIEIR	3	ERPAAIPIEIR3	17991.7	15297.2	8589.14
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	ERPAYAVHGNMLHYVK	ERPAYAVHGNMLHYVK	3	ERPAYAVHGNMLHYVK3	16933.7	17672.3	12154.2
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	ERPAYAVHGNMLHYVK	ERPAYAVHGNMLHYVK	4	ERPAYAVHGNMLHYVK4	103863	126123	105505
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	ERPDCLDTVLAR	ERPDC(UniMod:4)LDTVLAR	3	ERPDC(UniMod:4)LDTVLAR3	10216.4	5745.62	8525.82
B5DFC3	B5DFC3	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	1	ERPDLPPIQYEPVLCSR	ERPDLPPIQYEPVLC(UniMod:4)SR	3	ERPDLPPIQYEPVLC(UniMod:4)SR3		10955.6	9675.83
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	ERPDTGVYVK	ERPDTGVYVK	3	ERPDTGVYVK3	31517.3	25785.9	35724.9
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	ERPDVGVYIK	ERPDVGVYIK	3	ERPDVGVYIK3	29676.1	23981.1	25361.5
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	ERPETVLIDLIQR	ERPETVLIDLIQR	2	ERPETVLIDLIQR2			2312.84
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	ERPETVLIDLIQR	ERPETVLIDLIQR	3	ERPETVLIDLIQR3	27904.1	10940.6	30198
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	ERPGEQSEVAQLIQQTLEQER	ERPGEQSEVAQLIQQTLEQER	3	ERPGEQSEVAQLIQQTLEQER3	72030.5	31977.1	30894.3
D3ZYR1	D3ZYR1	FCHO2_RAT	Fcho2	F-BAR domain only protein 2	1	ERPGLIEFEECDPASAVEGIKPR	ERPGLIEFEEC(UniMod:4)DPASAVEGIKPR	3	ERPGLIEFEEC(UniMod:4)DPASAVEGIKPR3	9050.96	6723.04	13693.7
D3ZYR1	D3ZYR1	FCHO2_RAT	Fcho2	F-BAR domain only protein 2	1	ERPGLIEFEECDPASAVEGIKPR	ERPGLIEFEEC(UniMod:4)DPASAVEGIKPR	4	ERPGLIEFEEC(UniMod:4)DPASAVEGIKPR4	40380.3	52106.9	42989.9
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	ERPGVYTNVAK	ERPGVYTNVAK	3	ERPGVYTNVAK3	44698.4	43528.5	48954.9
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	ERPHEGTRPVHAVFVSEGK	ERPHEGTRPVHAVFVSEGK	3	ERPHEGTRPVHAVFVSEGK3	23261.9	16868.1	6319.81
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	ERPHEGTRPVHAVFVSEGK	ERPHEGTRPVHAVFVSEGK	4	ERPHEGTRPVHAVFVSEGK4	566060	538698	509544
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	ERPISLGIFPLPAGDGLLTPDTQK	ERPISLGIFPLPAGDGLLTPDTQK	3	ERPISLGIFPLPAGDGLLTPDTQK3	51548.9	45631.5	45426
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	ERPLAADDLR	ERPLAADDLR	3	ERPLAADDLR3	285602	355959	316703
A0A0U1RRV5	A0A0U1RRV5	A0A0U1RRV5_RAT	Cluh	Clustered mitochondria protein homolog	1	ERPLCPLQPQNR	ERPLC(UniMod:4)PLQPQNR	3	ERPLC(UniMod:4)PLQPQNR3		4216.31	7347.74
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	ERPLDVFCDMQTDGGGWLVFQR	ERPLDVFC(UniMod:4)DMQTDGGGWLVFQR	3	ERPLDVFC(UniMod:4)DMQTDGGGWLVFQR3	18649.2	28905.6	15140.2
P19357	P19357	GLUT4_RAT	Slc2a4	Solute carrier family 2, facilitated glucose transporter member 4	1	ERPLSLLQLLGSR	ERPLSLLQLLGSR	3	ERPLSLLQLLGSR3	32749	23708.3	20849.8
D3ZBX9	D3ZBX9	D3ZBX9_RAT	Ccdc92	Coiled-coil domain containing 92	1	ERPLVIPPIASDR	ERPLVIPPIASDR	3	ERPLVIPPIASDR3	6526.7	11232.3	13843.5
D3ZML4	D3ZML4	D3ZML4_RAT	Trabd	TraB domain containing	1	ERPNLPCTVTQLVAEDGSR	ERPNLPC(UniMod:4)TVTQLVAEDGSR	3	ERPNLPC(UniMod:4)TVTQLVAEDGSR3	8163.79	9074.22	6033.05
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	ERPPNYPGSLVWK	ERPPNYPGSLVWK	3	ERPPNYPGSLVWK3	4164.11	10304.7	
Q9JLS3	Q9JLS3	TAOK2_RAT	Taok2	Serine/threonine-protein kinase TAO2	1	ERPPTVIMDLIQR	ERPPTVIMDLIQR	3	ERPPTVIMDLIQR3	16544.8	3736.38	9856.87
Q5U2N3	Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	1	ERPQLTECEEPSIYSPAFPR	ERPQLTEC(UniMod:4)EEPSIYSPAFPR	3	ERPQLTEC(UniMod:4)EEPSIYSPAFPR3	6023.41	6711.98	5722.24
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	ERPSQPEGLR	ERPSQPEGLR	3	ERPSQPEGLR3	106948	82062	117211
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	ERPSQPEGLRK	ERPSQPEGLRK	3	ERPSQPEGLRK3	36867.8		24379
D4A929	D4A929	WDR81_RAT	Wdr81	WD repeat-containing protein 81	1	ERPTAGEDDLEQATEALDSISIPGK	ERPTAGEDDLEQATEALDSISIPGK	3	ERPTAGEDDLEQATEALDSISIPGK3	14016.4	12269.2	16695.8
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	ERPTSAIYPSDSFR	ERPTSAIYPSDSFR	2	ERPTSAIYPSDSFR2	4372.96	7042.86	5649.95
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	ERPTSAIYPSDSFR	ERPTSAIYPSDSFR	3	ERPTSAIYPSDSFR3	289487	325639	325711
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	ERPVPSTANSISSLATLSIK	ERPVPSTANSISSLATLSIK	3	ERPVPSTANSISSLATLSIK3	10769.1	15669.2	15383.9
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	ERPVVMAVLEALTGVLR	ERPVVMAVLEALTGVLR	3	ERPVVMAVLEALTGVLR3	8289.28		
D3ZXD8	D3ZXD8	TM245_RAT	Tmem245	Transmembrane protein 245	1	ERQEALAPWPITGLGK	ERQEALAPWPITGLGK	3	ERQEALAPWPITGLGK3	29780.6	32618	17694.6
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ERQESLQTVLSR	ERQESLQTVLSR	3	ERQESLQTVLSR3	5323.27	5610.18	6929.14
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	ERQPAEPPAPLR	ERQPAEPPAPLR	3	ERQPAEPPAPLR3	17380	9708.38	10012.3
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	ERQTNPSAMEVEEDDPVPEIR	ERQTNPSAMEVEEDDPVPEIR	3	ERQTNPSAMEVEEDDPVPEIR3	33668.5	25505.1	40860.2
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	ERSDTFINLR	ERSDTFINLR	2	ERSDTFINLR2	41789.4	43573.3	27707
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	ERSDTFINLR	ERSDTFINLR	3	ERSDTFINLR3	1.46111e+06	1.91727e+06	1.77938e+06
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	ERSEEEDKPDAGPDADGK	ERSEEEDKPDAGPDADGK	2	ERSEEEDKPDAGPDADGK2			725.484
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	ERSEEEDKPDAGPDADGK	ERSEEEDKPDAGPDADGK	3	ERSEEEDKPDAGPDADGK3			8333.37
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	ERTEIELSYAK	ERTEIELSYAK	3	ERTEIELSYAK3	9319.58	11226.1	10121.8
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	ERTEWIK	ERTEWIK	2	ERTEWIK2	347210	330467	307219
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	ERVDELTTDLEILK	ERVDELTTDLEILK	3	ERVDELTTDLEILK3	13737.9	12267.4	9898.71
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	ERVEAVNMAEGIIHDTETK	ERVEAVNMAEGIIHDTETK	3	ERVEAVNMAEGIIHDTETK3	10935.5	4736.99	4771.06
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	ERVEAVNMAEGIIHDTETK	ERVEAVNMAEGIIHDTETK	4	ERVEAVNMAEGIIHDTETK4	5852.96		
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	ERVEFILEQMR	ERVEFILEQMR	3	ERVEFILEQMR3	10305.3	7778	10053.2
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	ERVETLSQVEVILQQSAADIAR	ERVETLSQVEVILQQSAADIAR	3	ERVETLSQVEVILQQSAADIAR3	2454.28		8341.45
P97531	P97531	CIP4_RAT	Trip10	Cdc42-interacting protein 4	1	ERVEVEQSYAK	ERVEVEQSYAK	3	ERVEVEQSYAK3	7807.03	2913.26	4664.44
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	ERVTPPEGYDVVTVFPK	ERVTPPEGYDVVTVFPK	3	ERVTPPEGYDVVTVFPK3	40143.1	53987.6	61005.7
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	ERWDSNK	ERWDSNK	2	ERWDSNK2	6838.57		2931.76
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	ERWEAFCTDSLGEANK	ERWEAFC(UniMod:4)TDSLGEANK	3	ERWEAFC(UniMod:4)TDSLGEANK3	20541.1	20907.3	24992.4
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	ERWEAFCTDSLGEANKR	ERWEAFC(UniMod:4)TDSLGEANKR	4	ERWEAFC(UniMod:4)TDSLGEANKR4	4992.16	7901.2	4011.81
O08730	O08730	GLYG_RAT	Gyg1	Glycogenin-1	1	ERWEQGQADYMGADSFDNIK	ERWEQGQADYMGADSFDNIK	3	ERWEQGQADYMGADSFDNIK3	3913.25	5334.26	4251.5
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	ERWHMNLNSLMDR	ERWHMNLNSLMDR	3	ERWHMNLNSLMDR3	2829.41	7193.47	
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	ERYGPNELPTEEGK	ERYGPNELPTEEGK	3	ERYGPNELPTEEGK3	16145.3	16150.6	15541.7
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	ERYMEEMADTADAIEMATLDK	ERYMEEMADTADAIEMATLDK	3	ERYMEEMADTADAIEMATLDK3	3518.35	5074.81	653.314
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	ERYNFPNPNPFVEDDMDK	ERYNFPNPNPFVEDDMDK	3	ERYNFPNPNPFVEDDMDK3	31410.2	24540	28777.6
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	ERYPIDHAR	ERYPIDHAR	3	ERYPIDHAR3		12803.2	7848.78
Q4V7C7	Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	1	ERYSYVCPDLVK	ERYSYVC(UniMod:4)PDLVK	3	ERYSYVC(UniMod:4)PDLVK3	4390.56	6943.03	9866.65
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	ESAAHDYTLR	ESAAHDYTLR	2	ESAAHDYTLR2	20437.3	15396.7	29610
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	ESAAHDYTLR	ESAAHDYTLR	3	ESAAHDYTLR3	193986	216531	238849
A0A0G2K098	A0A0G2K098	A0A0G2K098_RAT	Mcc	MCC regulator of WNT signaling pathway	1	ESADAASPALSLAELR	ESADAASPALSLAELR	2	ESADAASPALSLAELR2	2872.19	5751.65	
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	ESAEPGEPDSSTLSLAEK	ESAEPGEPDSSTLSLAEK	2	ESAEPGEPDSSTLSLAEK2	65037.8	60997	52558.9
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	ESAEQSSGPGPSLRPQNSTTWR	ESAEQSSGPGPSLRPQNSTTWR	3	ESAEQSSGPGPSLRPQNSTTWR3	22819.9	27160.4	21926.4
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	ESAFQSEPR	ESAFQSEPR	2	ESAFQSEPR2	86554.3	94948.8	95422.4
F1LXD8	F1LXD8	F1LXD8_RAT	Emilin2	Elastin microfibril interfacer 2	1	ESAHGVQSGVSAVEGR	ESAHGVQSGVSAVEGR	3	ESAHGVQSGVSAVEGR3	1926.78		3888.55
A0A8I6G4R8	A0A8I6G4R8	A0A8I6G4R8_RAT	Hdac5	Histone deacetylase	1	ESAIASTEVK	ESAIASTEVK	2	ESAIASTEVK2	4502.35	7020.25	6970.5
Q4FZT0	Q4FZT0	STML2_RAT	Stoml2	Stomatin-like protein 2, mitochondrial	1	ESAINVAEGK	ESAINVAEGK	2	ESAINVAEGK2	14950	10466.1	21773.2
Q62720	Q62720	ZNT1_RAT	Slc30a1	Proton-coupled zinc antiporter SLC30A1	1	ESALILLQTVPK	ESALILLQTVPK	2	ESALILLQTVPK2	8246.38	5716.85	5834.8
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	ESALLYDKEK	ESALLYDKEK	3	ESALLYDKEK3	26404.3	25781.2	38200.8
P15684	P15684	AMPN_RAT	Anpep	Aminopeptidase N	1	ESALVFDPQSSSISNK	ESALVFDPQSSSISNK	2	ESALVFDPQSSSISNK2	15299.1	8537.79	9246.95
Q9JJM9	Q9JJM9	SEPT5_RAT	Septin5	Septin-5	1	ESAPFAVIGSNTVVEAK	ESAPFAVIGSNTVVEAK	2	ESAPFAVIGSNTVVEAK2	24908.8	20084	20717.6
P0DSP1	P0DSP1	SORL_RAT	Sorl1	Sortilin-related receptor	1	ESAPGLIIATGSVGK	ESAPGLIIATGSVGK	2	ESAPGLIIATGSVGK2	3192.88	2615.38	
O55043	O55043	ARHG7_RAT	Arhgef7	Rho guanine nucleotide exchange factor 7	1	ESAPQVLLPEEEK	ESAPQVLLPEEEK	2	ESAPQVLLPEEEK2	16456.1	13447.9	18316
O08628	O08628	PCOC1_RAT	Pcolce	Procollagen C-endopeptidase enhancer 1	1	ESAPSPGEDAQHGPQSR	ESAPSPGEDAQHGPQSR	3	ESAPSPGEDAQHGPQSR3			35092
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	ESAPTTPK	ESAPTTPK	2	ESAPTTPK2	28477.2		40141.5
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	ESAPTTPKEPAPTTPK	ESAPTTPKEPAPTTPK	3	ESAPTTPKEPAPTTPK3	37900.5	36491.8	16642.8
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	ESARGECEEMLSK	ESARGEC(UniMod:4)EEMLSK	2	ESARGEC(UniMod:4)EEMLSK2	26482.2	36519	42977.4
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	ESARGECEEMLSK	ESARGEC(UniMod:4)EEMLSK	3	ESARGEC(UniMod:4)EEMLSK3	563963	569298	696225
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	ESASAPFIPFSGGGQR	ESASAPFIPFSGGGQR	2	ESASAPFIPFSGGGQR2	58457.3	42501.4	50520.6
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	ESATEEK	ESATEEK	2	ESATEEK2		1317.14	
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	ESATEQYNTNALQR	ESATEQYNTNALQR	2	ESATEQYNTNALQR2	164030	166618	171892
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	ESATEQYNTNALQR	ESATEQYNTNALQR	3	ESATEQYNTNALQR3	13901.8	12440.3	15169.9
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	ESATLSEVLAGPLAQR	ESATLSEVLAGPLAQR	2	ESATLSEVLAGPLAQR2	28896.4	34191.2	26847.1
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	ESATLSEVLAGPLAQR	ESATLSEVLAGPLAQR	3	ESATLSEVLAGPLAQR3	4701.03		6482.85
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	ESATTMEK	ESATTMEK	2	ESATTMEK2			2019.18
Q99P99	Q99P99	HDAC4_RAT	Hdac4	Histone deacetylase 4	1	ESAVASTEVK	ESAVASTEVK	2	ESAVASTEVK2	5540.77	5239.5	2469.49
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	ESAVHSEADQNTSK	ESAVHSEADQNTSK	2	ESAVHSEADQNTSK2			2194.09
D3ZVB7	D3ZVB7	D3ZVB7_RAT	Ogn	Osteoglycin	1	ESAYLYAR	ESAYLYAR	2	ESAYLYAR2	35496	25106.1	22479.6
D3ZL95	D3ZL95	D3ZL95_RAT	Usp40	ubiquitinyl hydrolase 1	1	ESAYMLFYR	ESAYMLFYR	2	ESAYMLFYR2	10024.6		9348.31
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	ESCDSSLGLSEPEAKPQESR	ESC(UniMod:4)DSSLGLSEPEAKPQESR	3	ESC(UniMod:4)DSSLGLSEPEAKPQESR3	16230.4	11672.8	12796.5
D3ZYT8	D3ZYT8	D3ZYT8_RAT	Pikfyve	1-phosphatidylinositol-3-phosphate 5-kinase	1	ESCDVVLLDENLLK	ESC(UniMod:4)DVVLLDENLLK	2	ESC(UniMod:4)DVVLLDENLLK2	4270.74	4305.62	5212.99
D3ZES7	D3ZWP6;D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	0	ESCGLCLK	ESC(UniMod:4)GLC(UniMod:4)LK	2	ESC(UniMod:4)GLC(UniMod:4)LK2	75820.8	80374.2	81869.7
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	ESCLEAYTGIVQGLK	ESC(UniMod:4)LEAYTGIVQGLK	2	ESC(UniMod:4)LEAYTGIVQGLK2	20399.7	24597	29688.5
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	ESCLEAYTGIVQGLK	ESC(UniMod:4)LEAYTGIVQGLK	3	ESC(UniMod:4)LEAYTGIVQGLK3	7353.53	845.081	
P33436	P33436	MMP2_RAT	Mmp2	72 kDa type IV collagenase	1	ESCNLFVLK	ESC(UniMod:4)NLFVLK	2	ESC(UniMod:4)NLFVLK2	9742.13	7849.44	11526.9
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	ESCSNTIPGSSVVR	ESC(UniMod:4)SNTIPGSSVVR	2	ESC(UniMod:4)SNTIPGSSVVR2	458514	456204	481959
D3ZRJ7	D3ZRJ7	D3ZRJ7_RAT	Lrrk1	non-specific serine/threonine protein kinase	1	ESCSYLCSHTANR	ESC(UniMod:4)SYLC(UniMod:4)SHTANR	3	ESC(UniMod:4)SYLC(UniMod:4)SHTANR3	2698.67	3383.58	2236.04
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	ESCVECQK	ESC(UniMod:4)VEC(UniMod:4)QK	2	ESC(UniMod:4)VEC(UniMod:4)QK2			7170.81
A0A8I5ZS34	M0R4W4;A0A8I5ZQ16;A0A8I5ZS34	A0A8I5ZS34_RAT	Ctdsp1	protein-serine/threonine phosphatase	0	ESCVFHR	ESC(UniMod:4)VFHR	2	ESC(UniMod:4)VFHR2	19332.4	10425.8	11126.1
A0A8I5ZKU9	A0A8I5ZKU9	A0A8I5ZKU9_RAT	Shmt1	Serine hydroxymethyltransferase	1	ESDAEVYSIIK	ESDAEVYSIIK	2	ESDAEVYSIIK2	4661.26	2149.18	1659.87
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	ESDAMFAAER	ESDAMFAAER	2	ESDAMFAAER2	51699.6	36936.6	36847.1
G3V6K6	G3V6K6	G3V6K6_RAT	Egfr	Receptor protein-tyrosine kinase	1	ESDCLVCHR	ESDC(UniMod:4)LVC(UniMod:4)HR	3	ESDC(UniMod:4)LVC(UniMod:4)HR3	8671.57	7846.14	10495.7
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	ESDDKPEIEDVGSDEEEEEK	ESDDKPEIEDVGSDEEEEEK	3	ESDDKPEIEDVGSDEEEEEK3	26122.6	34909.8	31015.2
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	ESDDKPEIEDVGSDEEEEEKK	ESDDKPEIEDVGSDEEEEEKK	3	ESDDKPEIEDVGSDEEEEEKK3	3157.55		2828.72
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	ESDDKPEIEDVGSDEEEEEKK	ESDDKPEIEDVGSDEEEEEKK	4	ESDDKPEIEDVGSDEEEEEKK4		6493.66	9298.38
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	ESDDPMAYIHFTAEGEVTFK	ESDDPMAYIHFTAEGEVTFK	3	ESDDPMAYIHFTAEGEVTFK3	55355.7	35592.9	56446.7
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	ESDDRFSNVIR	ESDDRFSNVIR	3	ESDDRFSNVIR3	13684.9	17734.8	23589.4
Q66H86	Q66H86	OLFL1_RAT	Olfml1	Olfactomedin-like protein 1	1	ESDFCVESEEK	ESDFC(UniMod:4)VESEEK	2	ESDFC(UniMod:4)VESEEK2	10513.1	10545.8	8398.77
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ESDGETYIK	ESDGETYIK	2	ESDGETYIK2	23175.6	25852.6	24872
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	ESDGVLKPLPK	ESDGVLKPLPK	3	ESDGVLKPLPK3	6851	22160.4	5912.35
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	ESDIEQLR	ESDIEQLR	2	ESDIEQLR2	60893.3	46150.4	42690.8
O08984	O08984	LBR_RAT	Lbr	Delta(14)-sterol reductase LBR	1	ESDIKPLK	ESDIKPLK	2	ESDIKPLK2	4238.53	8707.59	3725.77
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	ESDIMTTNGVIHVVDK	ESDIMTTNGVIHVVDK	3	ESDIMTTNGVIHVVDK3	29845.3	30691.4	
Q04631	Q04631	FNTA_RAT	Fnta	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha	1	ESDIPASV	ESDIPASV	1	ESDIPASV1	12457.6	28293.9	
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	ESDLSDTLSPSK	ESDLSDTLSPSK	2	ESDLSDTLSPSK2	142129	121520	129033
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	ESDLSDTLSPSKEK	ESDLSDTLSPSKEK	3	ESDLSDTLSPSKEK3	6715.72	3791.28	7213.85
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	ESDLTLK	ESDLTLK	2	ESDLTLK2	53467.6	31438.3	53322.7
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	ESDLVQPINPR	ESDLVQPINPR	2	ESDLVQPINPR2	132094	130625	125204
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	ESDLVQPINPR	ESDLVQPINPR	3	ESDLVQPINPR3	7507.95	7898.87	5283.17
G3V7L4	G3V7L4	G3V7L4_RAT	Cdh16	Cadherin 16	1	ESDSNHVQLR	ESDSNHVQLR	2	ESDSNHVQLR2	5110.31	7821.33	3239.94
G3V7L4	G3V7L4	G3V7L4_RAT	Cdh16	Cadherin 16	1	ESDSNHVQLR	ESDSNHVQLR	3	ESDSNHVQLR3	139271	166908	152672
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	ESDTGLAPPALWDLAADK	ESDTGLAPPALWDLAADK	2	ESDTGLAPPALWDLAADK2	195322	188419	246525
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	ESDTGLAPPALWDLAADK	ESDTGLAPPALWDLAADK	3	ESDTGLAPPALWDLAADK3	10583.3		10929.5
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	ESDTHAVQIALMALK	ESDTHAVQIALMALK	2	ESDTHAVQIALMALK2	6184.31	9093.14	5304.54
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	ESDTHAVQIALMALK	ESDTHAVQIALMALK	3	ESDTHAVQIALMALK3	88658.4	106957	88122.9
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	ESDTYFCMSMR	ESDTYFC(UniMod:4)MSMR	2	ESDTYFC(UniMod:4)MSMR2	22873.1	26529.5	29809.2
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	ESDVAFIPTSGLSGENLTSR	ESDVAFIPTSGLSGENLTSR	3	ESDVAFIPTSGLSGENLTSR3		5319.95	13330.4
D4A6K4	D4A6K4	D4A6K4_RAT	Golga1	Golgin A1	1	ESEAFHLIK	ESEAFHLIK	2	ESEAFHLIK2	1443.48		
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	ESEALPEK	ESEALPEK	2	ESEALPEK2	83757	67527	89783.2
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	ESEDGHESPLFDFIESCLR	ESEDGHESPLFDFIESC(UniMod:4)LR	3	ESEDGHESPLFDFIESC(UniMod:4)LR3	10265.7	5006.73	4327.96
Q4G069	Q4G069	RMD1_RAT	Rmdn1	Regulator of microtubule dynamics protein 1	1	ESEDVELLWR	ESEDVELLWR	2	ESEDVELLWR2	13155.2	11916.8	11207.2
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	ESEEALQK	ESEEALQK	2	ESEEALQK2		33594.6	
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	ESEGALHEHMTSLASALK	ESEGALHEHMTSLASALK	3	ESEGALHEHMTSLASALK3	9421.54	5194.76	6807.16
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	ESEGALHEHMTSLASALK	ESEGALHEHMTSLASALK	4	ESEGALHEHMTSLASALK4	6096.8	5613.22	8407.66
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	ESEGLITSGNDK	ESEGLITSGNDK	2	ESEGLITSGNDK2	170671	169455	176236
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	ESEGSPDTDAAPGPDTDVTLTK	ESEGSPDTDAAPGPDTDVTLTK	3	ESEGSPDTDAAPGPDTDVTLTK3	23578.7	25423.2	24469.7
P27952	A0A0G2K8H4;A0A0U1RVI9;D3ZIY7;D3ZT78;D3ZAS1;P27952;A0A8I5ZSA5;A0A8I6A7W0;D3ZQW7	RS2_RAT	Rps2	Small ribosomal subunit protein uS5	0	ESEIIDFFLGASLK	ESEIIDFFLGASLK	2	ESEIIDFFLGASLK2	2434.22	5385.43	
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	ESELIYVFK	ESELIYVFK	2	ESELIYVFK2	21126.4	22898.2	29285.6
A0A8I5ZXD6	D4A5F0;A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	0	ESENEENPEEQGLEESGEEFAR	ESENEENPEEQGLEESGEEFAR	3	ESENEENPEEQGLEESGEEFAR3	4997.24	5192.68	2723.44
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	ESEPEPDVK	ESEPEPDVK	2	ESEPEPDVK2	16092.3	17370.3	13314.3
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	ESEPEPDVKK	ESEPEPDVKK	3	ESEPEPDVKK3	18818.7	21920.1	21643.7
Q5RKH6	Q5RKH6	OS9_RAT	Os9	Protein OS-9	1	ESEREQAILALTSTLDK	ESEREQAILALTSTLDK	3	ESEREQAILALTSTLDK3	9538.29	10674.5	6446
P62994	P62994	GRB2_RAT	Grb2	Growth factor receptor-bound protein 2	1	ESESAPGDFSLSVK	ESESAPGDFSLSVK	2	ESESAPGDFSLSVK2	133194	121109	114720
P23680	P23680	SAMP_RAT	Apcs	Serum amyloid P-component	1	ESETDYVK	ESETDYVK	2	ESETDYVK2	47268.9	33872.6	40434.8
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	ESEVLEGAER	ESEVLEGAER	2	ESEVLEGAER2	39626.3	45641.2	42421
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	ESEVLIGNLGDK	ESEVLIGNLGDK	2	ESEVLIGNLGDK2	66848.3	80118.7	83529.5
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	ESEVSREDEYK	ESEVSREDEYK	3	ESEVSREDEYK3	14166.4		
D3ZM19	D3ZM19	D3ZM19_RAT	Evi2b	Ecotropic viral integration site 2B	1	ESEVSTK	ESEVSTK	1	ESEVSTK1			7213.65
A0A8I6A5X2	A0A8I6A5X2	A0A8I6A5X2_RAT	Usp32	ubiquitinyl hydrolase 1	1	ESFDPSAFLVPR	ESFDPSAFLVPR	2	ESFDPSAFLVPR2	6402.86	8974.44	5484.04
A0A8I6GIL4	A0A8I6GIL4	A0A8I6GIL4_RAT	Tmem87a	Transmembrane protein 87A	1	ESFEGMK	ESFEGMK	2	ESFEGMK2	14623.1	16753	15705.3
P17220	P17220	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	1	ESFEGQMTEDNIEVGICNEAGFR	ESFEGQMTEDNIEVGIC(UniMod:4)NEAGFR	3	ESFEGQMTEDNIEVGIC(UniMod:4)NEAGFR3	73132.1	47076.3	75332.1
P17220	P17220	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	1	ESFEGQMTEDNIEVGICNEAGFRR	ESFEGQMTEDNIEVGIC(UniMod:4)NEAGFRR	3	ESFEGQMTEDNIEVGIC(UniMod:4)NEAGFRR3	54984.1	47880.7	50304.4
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	ESFENYR	ESFENYR	2	ESFENYR2	21242.7	13391.7	7440.01
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	ESFESQFLADTER	ESFESQFLADTER	2	ESFESQFLADTER2	51913.6	59402.7	62735.8
F1M9Q3	F1M9Q3	F1M9Q3_RAT	Ltn1	E3 ubiquitin-protein ligase listerin	1	ESFFPLTEGNLHTIQSLCPFLSK	ESFFPLTEGNLHTIQSLC(UniMod:4)PFLSK	3	ESFFPLTEGNLHTIQSLC(UniMod:4)PFLSK3	12935.2	14943.8	14388.8
Q6TA25	Q6TA25	FGOP2_RAT	Fgfr1op2	FGFR1 oncogene partner 2 homolog	1	ESFLNLR	ESFLNLR	2	ESFLNLR2	108872	115971	112805
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	ESFNEEYLK	ESFNEEYLK	2	ESFNEEYLK2	215004	215362	243804
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	ESFSLVQVQPGVDIIR	ESFSLVQVQPGVDIIR	2	ESFSLVQVQPGVDIIR2	44661.6	39928	44007.4
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	ESFSLVQVQPGVDIIR	ESFSLVQVQPGVDIIR	3	ESFSLVQVQPGVDIIR3	6682.79	9429.06	9347.44
M0R8J3	M0R8J3	M0R8J3_RAT	Jmy	Junction mediating and regulatory protein, p53 cofactor	1	ESFTLLPDADPLTR	ESFTLLPDADPLTR	2	ESFTLLPDADPLTR2	10674.1	15098.4	10661.4
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	ESFVAQVR	ESFVAQVR	2	ESFVAQVR2	14087.5	1796.55	17571.9
Q6XUX2	Q6XUX2	DUSTY_RAT	Dstyk	Dual serine/threonine and tyrosine protein kinase	1	ESFVGTLER	ESFVGTLER	2	ESFVGTLER2	9619.96	7718.56	4493.85
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	ESGAAEQVDNK	ESGAAEQVDNK	2	ESGAAEQVDNK2	7895.96		18896.4
A0A8I5Y661	A0A8I5Y661	A0A8I5Y661_RAT	Fam177a1	Family with sequence similarity 177, member A1	1	ESGCAATGETEAAAAAAFGDTTR	ESGC(UniMod:4)AATGETEAAAAAAFGDTTR	3	ESGC(UniMod:4)AATGETEAAAAAAFGDTTR3	19451.5	23340.2	21303.7
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	ESGCSFLLALMQK	ESGC(UniMod:4)SFLLALMQK	2	ESGC(UniMod:4)SFLLALMQK2	47018.8	40377.8	32355.6
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	ESGCSFLLALMQK	ESGC(UniMod:4)SFLLALMQK	3	ESGC(UniMod:4)SFLLALMQK3	32072.8	31868.3	32691.9
Q62740	Q62740	SPP24_RAT	Spp2	Secreted phosphoprotein 24	1	ESGDPSTCAFQR	ESGDPSTC(UniMod:4)AFQR	2	ESGDPSTC(UniMod:4)AFQR2	2.32528e+06	2.65396e+06	3.01262e+06
Q62740	Q62740	SPP24_RAT	Spp2	Secreted phosphoprotein 24	1	ESGDPSTCAFQR	ESGDPSTC(UniMod:4)AFQR	3	ESGDPSTC(UniMod:4)AFQR3	6155.94	2951.7	7358.69
A0A0G2JV12	A0A0G2JV12	A0A0G2JV12_RAT	Col15a1	Collagen type XV alpha 1 chain	1	ESGEFFLR	ESGEFFLR	2	ESGEFFLR2	24930	20961	18875.3
F1LT49	F1LT49	F1LT49_RAT	Lrrc47	Leucine rich repeat containing 47	1	ESGEGEEEVADSAR	ESGEGEEEVADSAR	2	ESGEGEEEVADSAR2	11405	10784.6	12704.7
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	ESGEGQGGYAK	ESGEGQGGYAK	2	ESGEGQGGYAK2			10611.9
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	ESGEYAISIK	ESGEYAISIK	2	ESGEYAISIK2	46366.1	58006.7	47657.6
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	ESGGEEWVLDASDSPVHR	ESGGEEWVLDASDSPVHR	3	ESGGEEWVLDASDSPVHR3	41684.6	49300.3	42009.3
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	ESGHMFPSHLLVTATHMYCLR	ESGHMFPSHLLVTATHMYC(UniMod:4)LR	4	ESGHMFPSHLLVTATHMYC(UniMod:4)LR4	11271.3	17865.8	11199.1
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	ESGIDLADSNQR	ESGIDLADSNQR	2	ESGIDLADSNQR2	562053	573228	582807
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	ESGLVYTEDEWQK	ESGLVYTEDEWQK	2	ESGLVYTEDEWQK2	27930.3	17875.9	28969.3
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	ESGLYFIR	ESGLYFIR	2	ESGLYFIR2	1.08565e+07	8.63466e+06	9.18762e+06
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	ESGLYFIRPLK	ESGLYFIRPLK	2	ESGLYFIRPLK2	4.52204e+06	3.83223e+06	3.88324e+06
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	ESGLYFIRPLK	ESGLYFIRPLK	3	ESGLYFIRPLK3	84421.6	91161.6	5.3512e+07
D3ZZB2	D3ZZB2	D3ZZB2_RAT	Pex1	Peroxisomal ATPase PEX1	1	ESGMNFISIQGPELLSK	ESGMNFISIQGPELLSK	2	ESGMNFISIQGPELLSK2	4037.37	1434.11	2631.46
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	ESGMTALLK	ESGMTALLK	2	ESGMTALLK2	268649	277209	290522
P27791	P27791	KAPCA_RAT	Prkaca	cAMP-dependent protein kinase catalytic subunit alpha	1	ESGNHYAMK	ESGNHYAMK	2	ESGNHYAMK2	24110.8		18945.3
A0A8I6AC42	A0A8I6AC42;D3ZMY4	A0A8I6AC42_RAT	ENSRNOG00000065690	Ig-like domain-containing protein	0	ESGPGMLQPSK	ESGPGMLQPSK	2	ESGPGMLQPSK2	348091	303824	333006
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	ESGQVVAIK	ESGQVVAIK	1	ESGQVVAIK1		1200.67	
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	ESGQVVAIK	ESGQVVAIK	2	ESGQVVAIK2	93380.6	97367.9	109754
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	ESGSLSPEHGPIVVHCSAGIGR	ESGSLSPEHGPIVVHC(UniMod:4)SAGIGR	3	ESGSLSPEHGPIVVHC(UniMod:4)SAGIGR3	20419.3	14854.2	10422.8
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	ESGSLSPEHGPIVVHCSAGIGR	ESGSLSPEHGPIVVHC(UniMod:4)SAGIGR	4	ESGSLSPEHGPIVVHC(UniMod:4)SAGIGR4	25218.9	29313.2	28127.3
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	ESGSSWHGGPDGLYEYLQLLGTPYR	ESGSSWHGGPDGLYEYLQLLGTPYR	3	ESGSSWHGGPDGLYEYLQLLGTPYR3	9184.33	8581.62	5242.52
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	ESGSVVVDR	ESGSVVVDR	2	ESGSVVVDR2	6246	4214.79	4088.74
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	ESGSVVVDREESHVADVR	ESGSVVVDREESHVADVR	3	ESGSVVVDREESHVADVR3	20312.8	16598.9	21408.7
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	ESGSVVVDREESHVADVR	ESGSVVVDREESHVADVR	4	ESGSVVVDREESHVADVR4	28824.3	32012.8	27262.2
P83006	P83006	PAFA2_RAT	Pafah2	Platelet-activating factor acetylhydrolase 2, cytoplasmic	1	ESGYPLIILSHGLGGFR	ESGYPLIILSHGLGGFR	3	ESGYPLIILSHGLGGFR3	13176	8639.35	5767.66
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	ESHASICR	ESHASIC(UniMod:4)R	2	ESHASIC(UniMod:4)R2			19342.5
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	ESHATLVFHNLLGEIDQQYSR	ESHATLVFHNLLGEIDQQYSR	3	ESHATLVFHNLLGEIDQQYSR3	14666.1	14119.2	10115.5
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	ESHATLVFHNLLGEIDQQYSR	ESHATLVFHNLLGEIDQQYSR	4	ESHATLVFHNLLGEIDQQYSR4	26215.6	45706.3	35368
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	ESHCSCAEALLSGFEVIDDSR	ESHC(UniMod:4)SC(UniMod:4)AEALLSGFEVIDDSR	3	ESHC(UniMod:4)SC(UniMod:4)AEALLSGFEVIDDSR3	5940.83	7017.67	10667.5
P09760	P09760	FER_RAT	Fer	Tyrosine-protein kinase Fer	1	ESHGKPGEYVLSVYSDGQR	ESHGKPGEYVLSVYSDGQR	3	ESHGKPGEYVLSVYSDGQR3	2075.66	858.373	3862.14
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	ESHGSVELSSLSLATAINSR	ESHGSVELSSLSLATAINSR	3	ESHGSVELSSLSLATAINSR3	2241.62	5145.44	3720.63
D3ZAE6	D3ZAE6	D3ZAE6_RAT	Vasn	Vasorin	1	ESHVVLASPEETR	ESHVVLASPEETR	2	ESHVVLASPEETR2	3384.95	4529.06	1535
D3ZAE6	D3ZAE6	D3ZAE6_RAT	Vasn	Vasorin	1	ESHVVLASPEETR	ESHVVLASPEETR	3	ESHVVLASPEETR3	31908.7	29352.2	41585.6
A0A8I6GKX8	A0A8I6GKX8	A0A8I6GKX8_RAT	Iqsec2	IQ motif and Sec7 domain ArfGEF 2	1	ESIAEVQEMEK	ESIAEVQEMEK	2	ESIAEVQEMEK2	3736.05	6956.62	2059.87
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	ESIDHLTIPSR	ESIDHLTIPSR	3	ESIDHLTIPSR3	111630	123768	114917
Q6AY56	Q6AY56	TBA8_RAT	Tuba8	Tubulin alpha-8 chain	1	ESIDLVLDR	ESIDLVLDR	2	ESIDLVLDR2	564694	482771	510337
P08460	P08460	NID1_RAT	Nid1	Nidogen-1 (Fragment)	1	ESIENLAK	ESIENLAK	1	ESIENLAK1		1491.14	2787.71
P08460	P08460	NID1_RAT	Nid1	Nidogen-1 (Fragment)	1	ESIENLAK	ESIENLAK	2	ESIENLAK2	199975	165478	192402
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	ESIESEIR	ESIESEIR	2	ESIESEIR2	705031	587793	715351
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	ESIESEIRR	ESIESEIRR	2	ESIESEIRR2	32062.1	32720.8	20790.1
Q5BJM8	Q5BJM8	ZNT7_RAT	Slc30a7	Zinc transporter 7	1	ESIGILMQR	ESIGILMQR	2	ESIGILMQR2	9159.02	5028.58	7596.58
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	ESIIDVEGIVR	ESIIDVEGIVR	2	ESIIDVEGIVR2	58695.4	36803.1	52729.4
Q62825	Q62825	EXOC3_RAT	Exoc3	Exocyst complex component 3	1	ESIISLK	ESIISLK	2	ESIISLK2	27466.8	28180.3	32326
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	ESIKDLADYASK	ESIKDLADYASK	3	ESIKDLADYASK3	12077.9	12381.1	13461
B5DFN2	D3ZWL6;B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	0	ESILDGLK	ESILDGLK	2	ESILDGLK2	107333	93366.6	99288.3
B5DFN2	D3ZWL6;B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	0	ESILDGLKR	ESILDGLKR	2	ESILDGLKR2	14735.2	18037.4	9685.62
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	ESILNDIR	ESILNDIR	2	ESILNDIR2	15226.6	10020.9	11427.8
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	ESIPLEFSEDCLYLNIYSPADLTK	ESIPLEFSEDC(UniMod:4)LYLNIYSPADLTK	3	ESIPLEFSEDC(UniMod:4)LYLNIYSPADLTK3			2673.3
A0A0G2K9Q0	A0A0G2K9Q0	A0A0G2K9Q0_RAT	Tbck	TBC1 domain containing kinase	1	ESIPLSDLK	ESIPLSDLK	2	ESIPLSDLK2	18726.8	10468.4	9008.63
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	ESISDVGFGMLK	ESISDVGFGMLK	2	ESISDVGFGMLK2	20233.5	20193.5	30338.9
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	ESISLLMR	ESISLLMR	2	ESISLLMR2	33802.3	30423.4	27785.4
B0BNN3	B0BNN3	CAH1_RAT	Ca1	Carbonic anhydrase 1	1	ESISLSPEQLAQLR	ESISLSPEQLAQLR	2	ESISLSPEQLAQLR2	4604.23	10294.6	9984.67
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	ESITGTLPR	ESITGTLPR	2	ESITGTLPR2	411414	396066	373263
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	ESITSSTK	ESITSSTK	2	ESITSSTK2	23129.6	24737.2	26525.5
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	ESIVGEIR	ESIVGEIR	2	ESIVGEIR2	26314	23476.9	31976.7
O88350	O88350	RBBP9_RAT	Rbbp9	Serine hydrolase RBBP9	1	ESIWLPFMETELHCDEK	ESIWLPFMETELHC(UniMod:4)DEK	3	ESIWLPFMETELHC(UniMod:4)DEK3		3117.49	
P13668	A0A8I6GEW2;P13668	STMN1_RAT	Stmn1	Stathmin	0	ESKDPADETEAD	ESKDPADETEAD	2	ESKDPADETEAD2	1910.71	3399.62	2095.31
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	ESKPLTAQQTTK	ESKPLTAQQTTK	2	ESKPLTAQQTTK2	1.10623e+07		8.16973e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	ESKPLTAQQTTK	ESKPLTAQQTTK	3	ESKPLTAQQTTK3	6.59725e+06		1.02647e+07
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	ESKPVENGILVTDAVGKPLQR	ESKPVENGILVTDAVGKPLQR	4	ESKPVENGILVTDAVGKPLQR4	16252.6	15176.6	14247.3
A0A8I5ZVI9	A0A8I5ZVI9	A0A8I5ZVI9_RAT	Ranbp3	RAN binding protein 3	1	ESLAESAAAYTK	ESLAESAAAYTK	2	ESLAESAAAYTK2	3261.12	5886.64	4619.82
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	ESLDDLTNLVVK	ESLDDLTNLVVK	2	ESLDDLTNLVVK2	6400.19	10070.1	3702.86
O35094	O35094	TIM44_RAT	Timm44	Mitochondrial import inner membrane translocase subunit TIM44	1	ESLDEVSK	ESLDEVSK	2	ESLDEVSK2	24278.9	22591.7	29034.6
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	ESLEPDAYALFHK	ESLEPDAYALFHK	3	ESLEPDAYALFHK3	9526.25	10425.4	9183.82
F1M386	F1M386	RPGF2_RAT	Rapgef2	Rap guanine nucleotide exchange factor 2	1	ESLEQAQSR	ESLEQAQSR	2	ESLEQAQSR2	8060.02	4207.46	
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	ESLESEFR	ESLESEFR	2	ESLESEFR2	25453.6	22777.5	26590.9
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	ESLEVQIHPSR	ESLEVQIHPSR	2	ESLEVQIHPSR2	5253.83	5357	5329.68
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	ESLEVQIHPSR	ESLEVQIHPSR	3	ESLEVQIHPSR3	67491.1	83246.6	69520.8
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	ESLFQAHIQDMNEK	ESLFQAHIQDMNEK	3	ESLFQAHIQDMNEK3	9555.8	5762.39	7382.78
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	ESLGELDK	ESLGELDK	2	ESLGELDK2	178800	194976	212799
D3ZQQ1	D3ZQQ1	D3ZQQ1_RAT	Aftph	Aftiphilin	1	ESLGGVDK	ESLGGVDK	2	ESLGGVDK2	10344.2	14205.1	9529.73
P10760	P10760;A0A8I6A7X9	SAHH_RAT	Ahcy	Adenosylhomocysteinase	0	ESLIDGIK	ESLIDGIK	2	ESLIDGIK2	10954.6	6429.93	11648.9
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	ESLISPHFTTNSDENSSIGK	ESLISPHFTTNSDENSSIGK	3	ESLISPHFTTNSDENSSIGK3	24496.3	16328.8	17844.3
Q9JHW1	Q9JHW1	CBPD_RAT	Cpd	Carboxypeptidase D	1	ESLITLIEK	ESLITLIEK	2	ESLITLIEK2	5552.07	6124.24	5737.72
P18422	P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	1	ESLKEEDESDDDNM	ESLKEEDESDDDNM	2	ESLKEEDESDDDNM2	61427.4	53242.3	73646.1
Q4KLJ8	Q4KLJ8	PDCL3_RAT	Pdcl3	Phosducin-like protein 3	1	ESLKELEEEEEGK	ESLKELEEEEEGK	3	ESLKELEEEEEGK3	6610.7		8672.75
Q4KLJ8	Q4KLJ8	PDCL3_RAT	Pdcl3	Phosducin-like protein 3	1	ESLKELEEEEEGKEEQR	ESLKELEEEEEGKEEQR	3	ESLKELEEEEEGKEEQR3	5828.35	9116.47	6638.45
Q4KLJ8	Q4KLJ8	PDCL3_RAT	Pdcl3	Phosducin-like protein 3	1	ESLKELEEEEEGKEEQR	ESLKELEEEEEGKEEQR	4	ESLKELEEEEEGKEEQR4	23236.7	25795.5	28735.3
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	ESLLEHYGGTPR	ESLLEHYGGTPR	2	ESLLEHYGGTPR2	5580.99	3961.51	3373.15
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	ESLLEHYGGTPR	ESLLEHYGGTPR	3	ESLLEHYGGTPR3	64545.3	52617.8	46279.2
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	ESLLNNK	ESLLNNK	2	ESLLNNK2	25083.5	32546.9	22715.1
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	ESLMSHAIELK	ESLMSHAIELK	2	ESLMSHAIELK2	746.9		2524.89
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	ESLMSHAIELK	ESLMSHAIELK	3	ESLMSHAIELK3	18716.9	15464.3	16222.2
D4A589	D4A589	D4A589_RAT	Smg6	Telomerase-binding protein EST1A	1	ESLMSLFEETK	ESLMSLFEETK	2	ESLMSLFEETK2	12101.6		7286.08
Q4FZT0	Q4FZT0	STML2_RAT	Stoml2	Stomatin-like protein 2, mitochondrial	1	ESLNANIVDAINQAADCWGIR	ESLNANIVDAINQAADC(UniMod:4)WGIR	3	ESLNANIVDAINQAADC(UniMod:4)WGIR3		6392.13	5629.26
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	ESLNLQK	ESLNLQK	2	ESLNLQK2	43661.1	56895.3	58692
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	ESLNVDVVK	ESLNVDVVK	2	ESLNVDVVK2	74729.5	73665.3	69306.1
D3ZU52	D3ZU52;A0A8I6GIJ6	D3ZU52_RAT	Cops7b	COP9 signalosome subunit 7B	0	ESLPELSAAQQNK	ESLPELSAAQQNK	2	ESLPELSAAQQNK2	40338.9	32626.4	30562
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	ESLPIEVDQLSGR	ESLPIEVDQLSGR	2	ESLPIEVDQLSGR2	96221.5	67790.3	57028
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	ESLPTLR	ESLPTLR	2	ESLPTLR2	180726	112056	94552.3
P53987	P53987	MOT1_RAT	Slc16a1	Monocarboxylate transporter 1	1	ESLQEAGK	ESLQEAGK	2	ESLQEAGK2	178686	213339	
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	ESLQELGR	ESLQELGR	2	ESLQELGR2	94437.8	88537.4	89769.7
Q62844	Q62844	FYN_RAT	Fyn	Tyrosine-protein kinase Fyn	1	ESLQLIK	ESLQLIK	2	ESLQLIK2			5788.42
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	ESLQQLAEVTR	ESLQQLAEVTR	2	ESLQQLAEVTR2	515436	494594	495185
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	ESLQSDWEVSK	ESLQSDWEVSK	2	ESLQSDWEVSK2	173001	164409	174061
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	ESLQSLLHSSR	ESLQSLLHSSR	3	ESLQSLLHSSR3	23541.7	28126.7	33379.4
Q7TP54	Q7TP54	RIPR2_RAT	Ripor2	Rho family-interacting cell polarization regulator 2	1	ESLSEINR	ESLSEINR	2	ESLSEINR2	9592.98	19360.3	13155.2
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	ESLSEVEEK	ESLSEVEEK	2	ESLSEVEEK2	516431	487903	536703
P20788	P20788	UCRI_RAT	Uqcrfs1	Cytochrome b-c1 complex subunit Rieske, mitochondrial	1	ESLSGQAATRPLVATVGLNVPASVR	ESLSGQAATRPLVATVGLNVPASVR	3	ESLSGQAATRPLVATVGLNVPASVR3	8449.37	12719.9	9747.06
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	ESLSGVTSHGLSCEVCK	ESLSGVTSHGLSC(UniMod:4)EVC(UniMod:4)K	2	ESLSGVTSHGLSC(UniMod:4)EVC(UniMod:4)K2	2877.3	7280.27	5304.22
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	ESLSGVTSHGLSCEVCK	ESLSGVTSHGLSC(UniMod:4)EVC(UniMod:4)K	3	ESLSGVTSHGLSC(UniMod:4)EVC(UniMod:4)K3	293508	312603	342930
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	ESLSNAADLQR	ESLSNAADLQR	2	ESLSNAADLQR2	16139.8	10210.5	
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	ESLSPSVR	ESLSPSVR	2	ESLSPSVR2	120199	116045	134603
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	ESLSQPGDFVLSVLNDQPK	ESLSQPGDFVLSVLNDQPK	3	ESLSQPGDFVLSVLNDQPK3	6530.54	12351.7	17872.3
B0BN94	B0BN94	F136A_RAT	Fam136a	Protein FAM136A	1	ESLSSIGK	ESLSSIGK	2	ESLSSIGK2	19129.1	20455.6	23048.4
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	ESLSTAAECVK	ESLSTAAEC(UniMod:4)VK	2	ESLSTAAEC(UniMod:4)VK2	14379.2	11259.5	17310.8
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	ESLTEVSETVAQHK	ESLTEVSETVAQHK	2	ESLTEVSETVAQHK2	2006.04	2278.39	1128.67
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	ESLTEVSETVAQHK	ESLTEVSETVAQHK	3	ESLTEVSETVAQHK3	35895.1	39633.5	46154.2
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	ESLTEVSETVAQHKEER	ESLTEVSETVAQHKEER	4	ESLTEVSETVAQHKEER4	7461.74	12308.7	15298.8
D4A7F6	D4A7F6	D4A7F6_RAT	Colec10	Collectin subfamily member 10	1	ESLTHCR	ESLTHC(UniMod:4)R	2	ESLTHC(UniMod:4)R2			54087.6
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	ESLTLDEADWK	ESLTLDEADWK	2	ESLTLDEADWK2	2.17146e+06	1.85449e+06	2.15996e+06
A0A8I5ZTX9	A0A8I5ZTX9	A0A8I5ZTX9_RAT	C2h1orf162	Hypothetical LOC100363228	1	ESLTYASMTFK	ESLTYASMTFK	2	ESLTYASMTFK2	77377.8	103176	100835
G3V8L0	G3V8L0	G3V8L0_RAT	Wdr24	GATOR complex protein WDR24	1	ESLVAAESGR	ESLVAAESGR	2	ESLVAAESGR2	6638.72	6761.3	8572.54
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	ESLVFAQTDKPIYKPGQTVR	ESLVFAQTDKPIYKPGQTVR	4	ESLVFAQTDKPIYKPGQTVR4	5352.55		3779.39
P15127	P15127	INSR_RAT	Insr	Insulin receptor	1	ESLVISGLR	ESLVISGLR	2	ESLVISGLR2	10638.2		15605.7
Q498R3	Q498R3	DJC10_RAT	Dnajc10	DnaJ homolog subfamily C member 10	1	ESLVSFAMQHVR	ESLVSFAMQHVR	3	ESLVSFAMQHVR3	19334.4	15973.6	12948.7
F1M1H0	F1M1H0	F1M1H0_RAT	Dera	deoxyribose-phosphate aldolase	1	ESLVWLSLVK	ESLVWLSLVK	2	ESLVWLSLVK2	31725	24804.5	16680
Q4V8A2	Q4V8A2	CDC27_RAT	Cdc27	Cell division cycle protein 27 homolog	1	ESLVYFLIGK	ESLVYFLIGK	2	ESLVYFLIGK2	7877.61	6726.92	5089.35
Q5U2R0	Q5U2R0	MAT2B_RAT	Mat2b	Methionine adenosyltransferase 2 subunit beta	1	ESLWPFLIDKR	ESLWPFLIDKR	3	ESLWPFLIDKR3	14270.4	18850.2	13712.9
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	ESLYQLLSQTSPENMHR	ESLYQLLSQTSPENMHR	3	ESLYQLLSQTSPENMHR3	4715.33	6493.42	4421.51
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	ESLYWLSDADKK	ESLYWLSDADKK	3	ESLYWLSDADKK3	8012.64	6045.99	12083.1
A0A0G2JVT8	A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	1	ESMAQFLSGK	ESMAQFLSGK	2	ESMAQFLSGK2	11477.6	9827.02	10930.2
P0C8E4	P0C8E4	M3K7_RAT	Map3k7	Mitogen-activated protein kinase kinase kinase 7	1	ESMAVFEQHCK	ESMAVFEQHC(UniMod:4)K	3	ESMAVFEQHC(UniMod:4)K3	10573.4	8525.13	10549.5
A0A0G2JZH0	A0A0G2JZH0	A0A0G2JZH0_RAT	Cab39	Calcium binding protein 39	1	ESMAVLEK	ESMAVLEK	2	ESMAVLEK2	54435.1	43417.1	47166.3
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	ESMDIVFECEVTGKPAPTVK	ESMDIVFEC(UniMod:4)EVTGKPAPTVK	3	ESMDIVFEC(UniMod:4)EVTGKPAPTVK3	27591	32728.5	27275.3
Q4KM87	Q4KM87	Q4KM87_RAT	Actl6a	Actin-like 6A	1	ESMEAISPLK	ESMEAISPLK	2	ESMEAISPLK2	2980.08	2918.6	
Q66HC5	Q66HC5	NUP93_RAT	Nup93	Nuclear pore complex protein Nup93	1	ESMLVEWEQVK	ESMLVEWEQVK	2	ESMLVEWEQVK2	5554.28	10650.6	10680
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	ESNAELTADCETK	ESNAELTADC(UniMod:4)ETK	2	ESNAELTADC(UniMod:4)ETK2	20924.7	18283.9	14186.4
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	ESNAELTADCETK	ESNAELTADC(UniMod:4)ETK	3	ESNAELTADC(UniMod:4)ETK3	204909	193019	165969
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	ESNAELTADCETKR	ESNAELTADC(UniMod:4)ETKR	2	ESNAELTADC(UniMod:4)ETKR2	306986	255171	219216
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	ESNAELTADCETKR	ESNAELTADC(UniMod:4)ETKR	3	ESNAELTADC(UniMod:4)ETKR3	5.55832e+06	5.454e+06	4.91289e+06
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	ESNCYDPER	ESNC(UniMod:4)YDPER	2	ESNC(UniMod:4)YDPER2	820251	803253	790884
D3ZUP8	D3ZUP8	D3ZUP8_RAT	Lmbrd2	LMBR1 domain containing 2	1	ESNFSDTTTNWSSK	ESNFSDTTTNWSSK	2	ESNFSDTTTNWSSK2	7873.94	9355.31	6418.46
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	ESNIHLIPYIIHTVLYVLNTTR	ESNIHLIPYIIHTVLYVLNTTR	4	ESNIHLIPYIIHTVLYVLNTTR4			1506.85
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	ESNPALGIDCLHK	ESNPALGIDC(UniMod:4)LHK	2	ESNPALGIDC(UniMod:4)LHK2	64834.6	50573.4	37455
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	ESNPALGIDCLHK	ESNPALGIDC(UniMod:4)LHK	3	ESNPALGIDC(UniMod:4)LHK3	383303	363559	386981
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	ESNSLFPAGIR	ESNSLFPAGIR	2	ESNSLFPAGIR2	48776.7	57421.9	58732.7
A0A8I6GBQ0	A0A8I6GBQ0	A0A8I6GBQ0_RAT	Stk26	Protein kinase domain-containing protein	1	ESNTHPEWSFTTVR	ESNTHPEWSFTTVR	2	ESNTHPEWSFTTVR2	15721	17008.6	27584.7
A0A8I6GBQ0	A0A8I6GBQ0	A0A8I6GBQ0_RAT	Stk26	Protein kinase domain-containing protein	1	ESNTHPEWSFTTVR	ESNTHPEWSFTTVR	3	ESNTHPEWSFTTVR3	100173	94915.3	101907
A0A0G2K8I0	A0A0G2K8I0	A0A0G2K8I0_RAT	Sh3bgrl2	SH3 domain-binding glutamic acid-rich-like protein	1	ESNTVFSFLGLKPR	ESNTVFSFLGLKPR	2	ESNTVFSFLGLKPR2	23873.1	18114	12809.4
A0A0G2K8I0	A0A0G2K8I0	A0A0G2K8I0_RAT	Sh3bgrl2	SH3 domain-binding glutamic acid-rich-like protein	1	ESNTVFSFLGLKPR	ESNTVFSFLGLKPR	3	ESNTVFSFLGLKPR3	156560	129999	163751
D4AD37	D4AD37	IMPA3_RAT	Bpnt2	Golgi-resident adenosine 3',5'-bisphosphate 3'-phosphatase	1	ESNVLHEK	ESNVLHEK	2	ESNVLHEK2	16364.6	15518.6	19082.9
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	ESNVQALEILLTYHGSDLLPHR	ESNVQALEILLTYHGSDLLPHR	4	ESNVQALEILLTYHGSDLLPHR4	5354.06	8619.95	6991.48
P62716	A0A0G2JYA4;P63331;P62716	PP2AB_RAT	Ppp2cb	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	0	ESNVQEVR	ESNVQEVR	2	ESNVQEVR2	485155	360897	459436
Q6AY05	Q6AY05	TM175_RAT	Tmem175	Endosomal/lysosomal proton channel TMEM175	1	ESPAHNVEPFSIDLHAPLSK	ESPAHNVEPFSIDLHAPLSK	4	ESPAHNVEPFSIDLHAPLSK4	4602.46	7452.88	2354.72
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	ESPAIQLASLEVVR	ESPAIQLASLEVVR	2	ESPAIQLASLEVVR2	27336.3	27387.3	30869.1
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	ESPAIQLASLEVVR	ESPAIQLASLEVVR	3	ESPAIQLASLEVVR3	5744.23		7833.43
F1M9C9	F1M9C9	F1M9C9_RAT	Hars2	histidine--tRNA ligase	1	ESPAIVQGR	ESPAIVQGR	2	ESPAIVQGR2	11455.2	9038.31	7575.63
Q9QX79	Q9QX79	FETUB_RAT	Fetub	Fetuin-B	1	ESPCTQSQDSCSLQASDSEPVGLCQGSLIK	ESPC(UniMod:4)TQSQDSC(UniMod:4)SLQASDSEPVGLC(UniMod:4)QGSLIK	4	ESPC(UniMod:4)TQSQDSC(UniMod:4)SLQASDSEPVGLC(UniMod:4)QGSLIK4	36468.6	19953.9	41245.9
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	ESPDTNGPK	ESPDTNGPK	2	ESPDTNGPK2			15215.2
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	ESPEFDLHFDK	ESPEFDLHFDK	3	ESPEFDLHFDK3	12448.1	19310.5	14587.2
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	ESPEGSYTDDANQEVR	ESPEGSYTDDANQEVR	2	ESPEGSYTDDANQEVR2	263130	289945	269979
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	ESPEGSYTDDANQEVR	ESPEGSYTDDANQEVR	3	ESPEGSYTDDANQEVR3	9633.5	13601.7	13034.5
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	ESPEIEPLPFTLAHDR	ESPEIEPLPFTLAHDR	3	ESPEIEPLPFTLAHDR3	12629.3	10698.6	5296.56
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	ESPENTSENEDYMK	ESPENTSENEDYMK	2	ESPENTSENEDYMK2	9147.09	11153.3	12302.2
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	ESPEQPFVVLNK	ESPEQPFVVLNK	2	ESPEQPFVVLNK2	29350.8	21975.8	29421.9
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	ESPESEGPIYEGLIL	ESPESEGPIYEGLIL	2	ESPESEGPIYEGLIL2	4714.07		4200.58
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	ESPEVLLTLDILK	ESPEVLLTLDILK	2	ESPEVLLTLDILK2	37547.2	31049.2	33908.9
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	ESPGDLAR	ESPGDLAR	2	ESPGDLAR2	76365.4	57247.4	75672.2
A0A8I6ALT5	A0A8I6ALT5	A0A8I6ALT5_RAT	Dok2	Docking protein 2	1	ESPGLEEK	ESPGLEEK	2	ESPGLEEK2	36257.7	29039.2	46170.5
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	ESPGNVQIVNGYFVHFFAPQGLPVVPK	ESPGNVQIVNGYFVHFFAPQGLPVVPK	4	ESPGNVQIVNGYFVHFFAPQGLPVVPK4	2.67634e+06	3.08536e+06	3.16591e+06
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	ESPGQAGVSETENSSQDALGLSK	ESPGQAGVSETENSSQDALGLSK	3	ESPGQAGVSETENSSQDALGLSK3	9257.38	5389.76	7915.3
D3ZEE4	D3ZEE4	D3ZEE4_RAT	Plxdc1	Plexin domain containing 1	1	ESPGQVLKPGK	ESPGQVLKPGK	2	ESPGQVLKPGK2	8636.61	7786.68	6205.61
D3ZEE4	D3ZEE4	D3ZEE4_RAT	Plxdc1	Plexin domain containing 1	1	ESPGQVLKPGK	ESPGQVLKPGK	3	ESPGQVLKPGK3	50702.9	58475.2	78298.8
A0A8I6A502	A0A8I6A502	A0A8I6A502_RAT	Tns3	Tensin 3	1	ESPICLTPAFPVSPETPYVK	ESPIC(UniMod:4)LTPAFPVSPETPYVK	3	ESPIC(UniMod:4)LTPAFPVSPETPYVK3	5241.9	1989.74	
O35763	O35763	MOES_RAT	Msn	Moesin	1	ESPLLFK	ESPLLFK	2	ESPLLFK2	329189	322481	312571
D3ZUB7	D3ZUB7	D3ZUB7_RAT	Anapc4	Anaphase-promoting complex subunit 4	1	ESPLLFPYYPR	ESPLLFPYYPR	2	ESPLLFPYYPR2	33174.3	26884.6	29620
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	ESPLLPAAAELAFHTVNCSALNAEELRR	ESPLLPAAAELAFHTVNC(UniMod:4)SALNAEELRR	4	ESPLLPAAAELAFHTVNC(UniMod:4)SALNAEELRR4	6623.03	8512.56	3900.93
Q4QR85	Q4QR85	MEP50_RAT	Wdr77	Methylosome protein WDR77	1	ESPPPLVPPAAR	ESPPPLVPPAAR	2	ESPPPLVPPAAR2	29359.8		31880.1
B5DEH0	B5DEH0	LIMD1_RAT	Limd1	LIM domain-containing protein 1	1	ESPPSWSTDSSLGPVLPESPTPSR	ESPPSWSTDSSLGPVLPESPTPSR	3	ESPPSWSTDSSLGPVLPESPTPSR3	11921.2	14759.7	10056.3
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	ESPQDSAITR	ESPQDSAITR	2	ESPQDSAITR2	70271.2	95892	83839.6
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	ESPQGEDMLNAIR	ESPQGEDMLNAIR	2	ESPQGEDMLNAIR2	78012.2	85717.8	93569.2
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	ESPRPPAAAEAPAGSDGEDGGRR	ESPRPPAAAEAPAGSDGEDGGRR	4	ESPRPPAAAEAPAGSDGEDGGRR4	15842.4	12576.1	8587.5
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	ESPSGTMK	ESPSGTMK	2	ESPSGTMK2			39839.1
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	ESPSLVSR	ESPSLVSR	2	ESPSLVSR2	46104.4	43443.3	37453.1
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	ESPVSAGNDAYVDLDR	ESPVSAGNDAYVDLDR	2	ESPVSAGNDAYVDLDR2	21851.9	21438.4	32610.1
F1M842	F1M842	F1M842_RAT	Tp53bp1	Tumor protein p53 binding protein 1	1	ESPVTLDAK	ESPVTLDAK	2	ESPVTLDAK2	3862.48	3579.1	3450.52
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	ESQAALEER	ESQAALEER	2	ESQAALEER2	59170.7	47778.7	63116
Q66H59	Q66H59	NPL_RAT	Npl	N-acetylneuraminate lyase	1	ESQELAQHAAEIGADGIAVIAPFFFK	ESQELAQHAAEIGADGIAVIAPFFFK	3	ESQELAQHAAEIGADGIAVIAPFFFK3	4068.31	8156.04	4236.13
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	ESQELYTLK	ESQELYTLK	2	ESQELYTLK2	6428.78	5033.61	9086.85
E9PT90	E9PT90	E9PT90_RAT	Spart	Spartin	1	ESQGGATSTEGTR	ESQGGATSTEGTR	2	ESQGGATSTEGTR2			3416.78
A0A8I6ANR6	A0A8I6ANR6	A0A8I6ANR6_RAT	Chuk	IkappaB kinase	1	ESQILSLLSDIGSGIR	ESQILSLLSDIGSGIR	3	ESQILSLLSDIGSGIR3	3138.64	3514.7	2372.68
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	ESQISAEIELLPTNDK	ESQISAEIELLPTNDK	2	ESQISAEIELLPTNDK2	7854.66	5502.36	5037.14
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	ESQISAEIELLPTNDKK	ESQISAEIELLPTNDKK	3	ESQISAEIELLPTNDKK3	18866.3	6687.23	17328.3
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	ESQMTIEER	ESQMTIEER	2	ESQMTIEER2	28412.5	31629	31759.4
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	ESQQVALDGELLEAMPK	ESQQVALDGELLEAMPK	2	ESQQVALDGELLEAMPK2	4326.38	9508.1	3457.23
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	ESQQYYHSLAVR	ESQQYYHSLAVR	3	ESQQYYHSLAVR3	13720	9912.7	11877.3
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	ESQSEREEFENEFK	ESQSEREEFENEFK	3	ESQSEREEFENEFK3		36189.4	9699.67
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	ESQSHPGDFVLSVR	ESQSHPGDFVLSVR	2	ESQSHPGDFVLSVR2	21313.5	28020.8	15887
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	ESQSHPGDFVLSVR	ESQSHPGDFVLSVR	3	ESQSHPGDFVLSVR3	293844	286237	318060
Q5I0D1	Q5I0D1	GLOD4_RAT	Glod4	Glyoxalase domain-containing protein 4	1	ESQSILTPLVSLDTPGK	ESQSILTPLVSLDTPGK	2	ESQSILTPLVSLDTPGK2	4516.52	5757.59	6059.5
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	ESQTQDNITVR	ESQTQDNITVR	2	ESQTQDNITVR2	21529.7	19286.3	19794.8
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	ESQVQELEASLAELR	ESQVQELEASLAELR	2	ESQVQELEASLAELR2	21975.2	23704.7	29446.5
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	ESQVQELEASLAELR	ESQVQELEASLAELR	3	ESQVQELEASLAELR3	26936.5	16867.1	21258.7
A0A8I6AIH6	A0A8I6AIH6	A0A8I6AIH6_RAT	Suclg2	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial	1	ESQVYQAFK	ESQVYQAFK	2	ESQVYQAFK2	49146.9	39973.5	51537.3
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	ESQYLMESHPDQK	ESQYLMESHPDQK	2	ESQYLMESHPDQK2	8226.67	5191.63	6926.64
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	ESQYLMESHPDQK	ESQYLMESHPDQK	3	ESQYLMESHPDQK3	94956.9	120799	86578.9
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	ESRPPEER	ESRPPEER	2	ESRPPEER2			2787.14
Q6AYQ4	Q6AYQ4	TM109_RAT	Tmem109	Transmembrane protein 109	1	ESSADILTEIGR	ESSADILTEIGR	2	ESSADILTEIGR2	10746.9	14143.7	8512.91
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	ESSCFQDVGPQAPVGSVYQK	ESSC(UniMod:4)FQDVGPQAPVGSVYQK	3	ESSC(UniMod:4)FQDVGPQAPVGSVYQK3	137470	131424	163473
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	ESSCLALNDLLR	ESSC(UniMod:4)LALNDLLR	2	ESSC(UniMod:4)LALNDLLR2	10132.6	17744.4	4228.39
P82450	P82450	SIAE_RAT	Siae	Sialate O-acetylesterase	1	ESSCPFR	ESSC(UniMod:4)PFR	2	ESSC(UniMod:4)PFR2	6323.64	9723.51	5473.05
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	ESSEESGEFDDLVSALR	ESSEESGEFDDLVSALR	2	ESSEESGEFDDLVSALR2	77271.7	77464.1	91427.5
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	ESSEESGEFDDLVSALR	ESSEESGEFDDLVSALR	3	ESSEESGEFDDLVSALR3	16608	14233.7	12810.7
Q0H8B9	Q0H8B9;A4KWA6;A0A8I6AHW1	CL2DB_RAT	Clec2d11	C-type lectin domain family 2 member D11	0	ESSEHPWK	ESSEHPWK	2	ESSEHPWK2	4120.06	6014.69	1986.68
Q9JJW1	Q9JJW1	TSN2_RAT	Tspan2	Tetraspanin-2	1	ESSEQVQPTCPK	ESSEQVQPTC(UniMod:4)PK	2	ESSEQVQPTC(UniMod:4)PK2	34844.1	42758.5	35571.9
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	ESSFVEK	ESSFVEK	2	ESSFVEK2	54380.7	51897.7	51734.4
B4F767	B4F767	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	1	ESSGTALAPETR	ESSGTALAPETR	2	ESSGTALAPETR2	24537.9	26076.6	31827.1
B2GV39	B2GV39	B2GV39_RAT	Mgat4b	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B	1	ESSLQPAVR	ESSLQPAVR	2	ESSLQPAVR2	13475.6	9612.76	12313.2
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	ESSLRPDDDRIPR	ESSLRPDDDRIPR	3	ESSLRPDDDRIPR3	39905.3	32682.3	29377
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	ESSLRPDDDRIPR	ESSLRPDDDRIPR	4	ESSLRPDDDRIPR4	79332.6	59348.7	59858
A0A0G2JTY4	A0A0G2JTY4	A0A0G2JTY4_RAT	Nfatc3	Nuclear factor of activated T-cells 3	1	ESSLSPSPASSVSSR	ESSLSPSPASSVSSR	2	ESSLSPSPASSVSSR2	3835.07	3647.69	
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	ESSLTNTMGGYK	ESSLTNTMGGYK	2	ESSLTNTMGGYK2	11877.9	7146.19	7936.69
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	ESSNSLLNHQLSEIDQAR	ESSNSLLNHQLSEIDQAR	3	ESSNSLLNHQLSEIDQAR3	10107.4	20071.9	16986
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	ESSPVSSSSVNQEPLAVK	ESSPVSSSSVNQEPLAVK	2	ESSPVSSSSVNQEPLAVK2	11258	5138.98	12870.3
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	ESSPVSSSSVNQEPLAVK	ESSPVSSSSVNQEPLAVK	3	ESSPVSSSSVNQEPLAVK3	4248.34		2551.01
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	ESSQGTGVLEPEPAR	ESSQGTGVLEPEPAR	2	ESSQGTGVLEPEPAR2	3798.52		3376.76
D3ZDZ1	D3ZDZ1	D3ZDZ1_RAT	Apbb1ip	Amyloid beta precursor protein binding family B member 1 interacting protein	1	ESSQNQGHSALLEASDGQGTAPR	ESSQNQGHSALLEASDGQGTAPR	3	ESSQNQGHSALLEASDGQGTAPR3	7537.16	2583.37	5925.34
Q9ES54	Q9ES54	NPL4_RAT	Nploc4	Nuclear protein localization protein 4 homolog	1	ESSSEQYVPDVFYK	ESSSEQYVPDVFYK	2	ESSSEQYVPDVFYK2	18297.2	22248	11691.9
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	ESSSGPSVDMLSSLGR	ESSSGPSVDMLSSLGR	2	ESSSGPSVDMLSSLGR2	26386	28367	23271.7
P62870	A0A8I6AGE5;A0A8I5ZKZ8;A0A8I6AA09;M0R6V0;P62870;A0A8I6GLA7;A0A8I5ZTT3	ELOB_RAT	Elob	Elongin-B	0	ESSTVFELK	ESSTVFELK	2	ESSTVFELK2	95786.7	92105.3	100649
P62870	P62870;A0A8I5ZTT3	ELOB_RAT	Elob	Elongin-B	0	ESSTVFELKR	ESSTVFELKR	2	ESSTVFELKR2	3147.93	3022.95	4610.05
P62870	P62870;A0A8I5ZTT3	ELOB_RAT	Elob	Elongin-B	0	ESSTVFELKR	ESSTVFELKR	3	ESSTVFELKR3	68650.6	89126.2	84475.3
Q5FWT9	Q5FWT9	SIKE1_RAT	Sike1	Suppressor of IKBKE 1	1	ESSVAPEAQTIR	ESSVAPEAQTIR	2	ESSVAPEAQTIR2	94633.9	77306.8	84273.2
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	ESSYHLLISR	ESSYHLLISR	3	ESSYHLLISR3	12384.5	20581.7	15259.3
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	ESSYVEMK	ESSYVEMK	2	ESSYVEMK2	60135.5	55411.1	50942.3
Q5FWU3	Q5FWU3	ATG9A_RAT	Atg9a	Autophagy-related protein 9A	1	ESTAFLGFLK	ESTAFLGFLK	2	ESTAFLGFLK2	7405.88	4428.3	4809.53
Q5M7T4	Q5M7T4	YIPF4_RAT	Yipf4	Protein YIPF4	1	ESTATTFLR	ESTATTFLR	2	ESTATTFLR2	69680.5	66500.8	72394.6
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	ESTDEILGR	ESTDEILGR	2	ESTDEILGR2	39417.6	39099.6	38094.1
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	ESTDLEPGAGR	ESTDLEPGAGR	2	ESTDLEPGAGR2	101774	114629	105518
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	ESTDTIDQATQLVEQAHSMR	ESTDTIDQATQLVEQAHSMR	3	ESTDTIDQATQLVEQAHSMR3	31852.8	34186.3	30386.5
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	ESTEFLQQNPVTEYMK	ESTEFLQQNPVTEYMK	2	ESTEFLQQNPVTEYMK2	21003	30426.4	11955.7
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	ESTEFLQQNPVTEYMK	ESTEFLQQNPVTEYMK	3	ESTEFLQQNPVTEYMK3	10203.5	22682.6	13698.6
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	ESTEVIVHEK	ESTEVIVHEK	2	ESTEVIVHEK2	3175	1503.27	2572.35
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	ESTEVIVHEK	ESTEVIVHEK	3	ESTEVIVHEK3	5845.87	10007.8	7822.68
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	ESTEVIVHEKPFISVEWLK	ESTEVIVHEKPFISVEWLK	3	ESTEVIVHEKPFISVEWLK3	55422.3	43000.8	45621.4
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	ESTEVIVHEKPFISVEWLK	ESTEVIVHEKPFISVEWLK	4	ESTEVIVHEKPFISVEWLK4	47897	37848.9	34658.9
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	ESTEVQSLSLEEGEMETDVEKEK	ESTEVQSLSLEEGEMETDVEKEK	3	ESTEVQSLSLEEGEMETDVEKEK3	17843.3	22052.9	10291.8
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	ESTFLDEGPDEQEITPLQHTPR	ESTFLDEGPDEQEITPLQHTPR	3	ESTFLDEGPDEQEITPLQHTPR3		15440.1	7293.71
A0A8I6AH91	A0A8I5ZWT0;Q6AYU2;A0A8I6AH91	A0A8I6AH91_RAT	Pcbp1	Poly(rC) binding protein 1	0	ESTGAQVQVAGDMLPNSTER	ESTGAQVQVAGDMLPNSTER	3	ESTGAQVQVAGDMLPNSTER3	30306.1	31626	32560.2
P28648	P28648	CD63_RAT	Cd63	CD63 antigen	1	ESTIHTQGCVETIAAWLR	ESTIHTQGC(UniMod:4)VETIAAWLR	3	ESTIHTQGC(UniMod:4)VETIAAWLR3	48742.6	48735.5	46705.2
Q9WU61	Q9WU61	CLCC1_RAT	Clcc1	Chloride channel CLIC-like protein 1	1	ESTLAECSQCAK	ESTLAEC(UniMod:4)SQC(UniMod:4)AK	2	ESTLAEC(UniMod:4)SQC(UniMod:4)AK2	2858.2		2035.09
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	ESTLEAIGYICQDIDPEQLQDK	ESTLEAIGYIC(UniMod:4)QDIDPEQLQDK	3	ESTLEAIGYIC(UniMod:4)QDIDPEQLQDK3	51195.3	43630.4	43379
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	ESTLGQAK	ESTLGQAK	2	ESTLGQAK2	90846.8	47400.4	50117.7
P62986	A0A8I6AN99;P62986;P0CG51;Q63429;F1LU69;A0A8I6G8I7;P62982;A0A8I6A5Y3	RL40_RAT	Uba52	Ubiquitin-ribosomal protein eL40 fusion protein	0	ESTLHLVLR	ESTLHLVLR	2	ESTLHLVLR2	56642.8	51225.4	55543.1
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	ESTPDDLLRPSTELATGHQR	ESTPDDLLRPSTELATGHQR	3	ESTPDDLLRPSTELATGHQR3	89498.4	92743	93229.3
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	ESTPDDLLRPSTELATGHQR	ESTPDDLLRPSTELATGHQR	4	ESTPDDLLRPSTELATGHQR4	137850	116536	125261
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	ESTQGMSSLLR	ESTQGMSSLLR	2	ESTQGMSSLLR2	24005.3	20983.8	22428.3
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	ESTQNMTSLLK	ESTQNMTSLLK	2	ESTQNMTSLLK2	6351	5204.18	5555.48
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	ESTQPPEDSSPPASSESSSTR	ESTQPPEDSSPPASSESSSTR	3	ESTQPPEDSSPPASSESSSTR3	7103.71	12533.1	13276.6
A0A8I6A8Q1	A0A8I6A8Q1	A0A8I6A8Q1_RAT	A2ml1	Alpha-2-macroglobulin-like 1	1	ESTQSFLICPK	ESTQSFLIC(UniMod:4)PK	2	ESTQSFLIC(UniMod:4)PK2	12592.1	9154.07	7178.44
F1LWX9	F1LWX9	F1LWX9_RAT	Tmem117	Transmembrane protein 117	1	ESTSAAEADQDPAASPSLR	ESTSAAEADQDPAASPSLR	2	ESTSAAEADQDPAASPSLR2	12846.7	19167.4	17119.7
F1LWX9	F1LWX9	F1LWX9_RAT	Tmem117	Transmembrane protein 117	1	ESTSAAEADQDPAASPSLR	ESTSAAEADQDPAASPSLR	3	ESTSAAEADQDPAASPSLR3	14873.7	13021.6	17352.9
D4A748	D4A748	D4A748_RAT	Wdfy4	WDFY family member 4	1	ESTSCSQWELDRR	ESTSC(UniMod:4)SQWELDRR	3	ESTSC(UniMod:4)SQWELDRR3	2280.3	4703.08	2539.52
Q3ZU82	Q3ZU82	GOGA5_RAT	Golga5	Golgin subfamily A member 5	1	ESTSNTFYSK	ESTSNTFYSK	2	ESTSNTFYSK2	2378.48	4747.55	2231.61
Q63616	Q63616	VP33B_RAT	Vps33b	Vacuolar protein sorting-associated protein 33B	1	ESTSYIEEHIDR	ESTSYIEEHIDR	3	ESTSYIEEHIDR3	14029.4	13353.6	10303.5
Q9ES71	Q9ES71	GNPAT_RAT	Gnpat	Dihydroxyacetone phosphate acyltransferase	1	ESTTGLLK	ESTTGLLK	2	ESTTGLLK2	3974.46	3464.36	3837.68
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	ESTTVSPSYIAR	ESTTVSPSYIAR	2	ESTTVSPSYIAR2	23475.7	21157.3	21340.1
Q5U1X1	Q5U1X1	ORN_RAT	Rexo2	Oligoribonuclease, mitochondrial	1	ESTVTLQQAEYEFLSFVR	ESTVTLQQAEYEFLSFVR	3	ESTVTLQQAEYEFLSFVR3		6949.36	4967.77
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	ESVASGDDRAEEDMDEALEK	ESVASGDDRAEEDMDEALEK	3	ESVASGDDRAEEDMDEALEK3	3603.83	2571.65	
Q5I0C3	Q5I0C3	MCCA_RAT	Mccc1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	1	ESVCQAALGLILK	ESVC(UniMod:4)QAALGLILK	2	ESVC(UniMod:4)QAALGLILK2	17109.9	10449	3236.64
Q5XFW8	Q5XFW8	SEC13_RAT	Sec13	Protein SEC13 homolog	1	ESVDGQWVCISDVNK	ESVDGQWVC(UniMod:4)ISDVNK	2	ESVDGQWVC(UniMod:4)ISDVNK2	13557.1	10240.2	11940.1
Q5XFW8	Q5XFW8	SEC13_RAT	Sec13	Protein SEC13 homolog	1	ESVDGQWVCISDVNK	ESVDGQWVC(UniMod:4)ISDVNK	3	ESVDGQWVC(UniMod:4)ISDVNK3	2934.95	5371.35	
A0A8I6ABN1	A0A8I6ABN1	A0A8I6ABN1_RAT	Snx19	Sorting nexin 19	1	ESVDSGLLDK	ESVDSGLLDK	2	ESVDSGLLDK2	17058.8	13396.1	6811.39
P04182	P04182	OAT_RAT	Oat	Ornithine aminotransferase, mitochondrial	1	ESVEIINK	ESVEIINK	2	ESVEIINK2	11634	3836.47	4985.55
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	ESVELPLTHPEYYEEMGIKPPK	ESVELPLTHPEYYEEMGIKPPK	3	ESVELPLTHPEYYEEMGIKPPK3	33783.2	28457.6	32090
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	ESVELPLTHPEYYEEMGIKPPK	ESVELPLTHPEYYEEMGIKPPK	4	ESVELPLTHPEYYEEMGIKPPK4	98936.1	88189.6	93698.4
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	ESVEQQADSFK	ESVEQQADSFK	2	ESVEQQADSFK2	82945.2	73234.6	78549.4
Q5XIH7	Q5XIH7	PHB2_RAT	Phb2	Prohibitin-2	1	ESVFTVEGGHR	ESVFTVEGGHR	2	ESVFTVEGGHR2	52469.3	54021.4	41151.1
Q5XIH7	Q5XIH7	PHB2_RAT	Phb2	Prohibitin-2	1	ESVFTVEGGHR	ESVFTVEGGHR	3	ESVFTVEGGHR3	278245	217082	240966
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	ESVLGEK	ESVLGEK	2	ESVLGEK2	89032.9	74975.6	87965.3
G3V9T7	G3V9T7	GET3_RAT	Get3	ATPase Get3	1	ESVLIISTDPAHNISDAFDQK	ESVLIISTDPAHNISDAFDQK	3	ESVLIISTDPAHNISDAFDQK3	111773	120726	129550
Q3B7V0	Q3B7V0	Q3B7V0_RAT	Dhrs3	Dehydrogenase/reductase 3	1	ESVLITGGGR	ESVLITGGGR	2	ESVLITGGGR2	4606.24	7614.84	4273.3
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	ESVLNSSVK	ESVLNSSVK	2	ESVLNSSVK2	216630	225686	219463
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	ESVLQMMQAGQR	ESVLQMMQAGQR	2	ESVLQMMQAGQR2	46383.9	54145.4	41715.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ESVNFSSK	ESVNFSSK	2	ESVNFSSK2	47810.5	39885.4	37672.4
A0A0G2K9Q0	A0A0G2K9Q0	A0A0G2K9Q0_RAT	Tbck	TBC1 domain containing kinase	1	ESVNLFCWTPK	ESVNLFC(UniMod:4)WTPK	2	ESVNLFC(UniMod:4)WTPK2	6131.29		1754.58
Q704S8	Q704S8	CACP_RAT	Crat	Carnitine O-acetyltransferase	1	ESVNSIQK	ESVNSIQK	2	ESVNSIQK2	7361.3	8665.4	6052.21
D3ZYL0	D3ZYL0	D3ZYL0_RAT	Ripk1	Receptor interacting serine/threonine kinase 1	1	ESVPLSVK	ESVPLSVK	2	ESVPLSVK2	9253.51	10401.8	11206.6
Q3KR59	Q3KR59	UBP10_RAT	Usp10	Ubiquitin carboxyl-terminal hydrolase 10	1	ESVQGYTTK	ESVQGYTTK	2	ESVQGYTTK2	21115	14736.2	27179.3
Q7TP42	Q7TP42	Q7TP42_RAT	Sec62	Translocation protein SEC62	1	ESVVDYCNR	ESVVDYC(UniMod:4)NR	2	ESVVDYC(UniMod:4)NR2	170320	112506	122624
A0A8I5ZZZ6	A0A8I5ZZZ6	A0A8I5ZZZ6_RAT	Riok3	Serine/threonine-protein kinase RIO3	1	ESVVFHAYGGSLEDEKEDGK	ESVVFHAYGGSLEDEKEDGK	4	ESVVFHAYGGSLEDEKEDGK4	24594	8579.94	15277.3
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	ESVVFVQTDK	ESVVFVQTDK	2	ESVVFVQTDK2	264323	155280	116140
P14046	Q6IE52;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	ESVVFVQTDKPMYK	ESVVFVQTDKPMYK	2	ESVVFVQTDKPMYK2	1.80786e+07	205655	144312
P14046	Q6IE52;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	ESVVFVQTDKPMYK	ESVVFVQTDKPMYK	3	ESVVFVQTDKPMYK3	1.40007e+06	2.43729e+06	1.95259e+06
P14046	Q6IE52;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	ESVVFVQTDKPMYK	ESVVFVQTDKPMYK	4	ESVVFVQTDKPMYK4	75575.5	51904.4	54387.1
P14046	Q6IE52;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	ESVVFVQTDKPMYKPGQSVK	ESVVFVQTDKPMYKPGQSVK	3	ESVVFVQTDKPMYKPGQSVK3	1.055e+07	8.43341e+06	100599
P14046	Q6IE52;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	ESVVFVQTDKPMYKPGQSVK	ESVVFVQTDKPMYKPGQSVK	4	ESVVFVQTDKPMYKPGQSVK4	4.60704e+07	4.5466e+07	4.90643e+07
Q03626	A0A8I6AG69;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	ESVVFVQTDKPVYK	ESVVFVQTDKPVYK	2	ESVVFVQTDKPVYK2	32617.5		14059.1
Q03626	A0A8I6AG69;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	ESVVFVQTDKPVYK	ESVVFVQTDKPVYK	3	ESVVFVQTDKPVYK3	1.74635e+06	1.08768e+06	1.14102e+06
Q03626	A0A8I6AG69;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	ESVVFVQTDKPVYKPGQSVK	ESVVFVQTDKPVYKPGQSVK	3	ESVVFVQTDKPVYKPGQSVK3	1.67368e+06	1.19843e+06	1.00873e+06
Q03626	A0A8I6AG69;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	ESVVFVQTDKPVYKPGQSVK	ESVVFVQTDKPVYKPGQSVK	4	ESVVFVQTDKPVYKPGQSVK4	4.76452e+06	3.60781e+06	3.40979e+06
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	ESVVPVYVK	ESVVPVYVK	2	ESVVPVYVK2	71548.5	62913.1	76567.3
P0C1S9	P0C1S9	DGLB_RAT	Daglb	Diacylglycerol lipase-beta	1	ESVVVAVR	ESVVVAVR	2	ESVVVAVR2	80632.1	86502.3	90936.8
F7EYK0	F7EYK0	F7EYK0_RAT	Fkbp5	peptidylprolyl isomerase	1	ESWEMDTK	ESWEMDTK	2	ESWEMDTK2	11401.6	5709.55	16011.1
Q5BJM5	Q5BJM5	PKHO1_RAT	Plekho1	Pleckstrin homology domain-containing family O member 1	1	ESWINALSSAITR	ESWINALSSAITR	2	ESWINALSSAITR2	5604.1		5768.63
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	ESWLTGEEIEDIVEK	ESWLTGEEIEDIVEK	2	ESWLTGEEIEDIVEK2	41611.5	46841.6	40109.7
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	ESWLTGEEIEDIVEK	ESWLTGEEIEDIVEK	3	ESWLTGEEIEDIVEK3	3584.91	2859.61	
P17945	P17945	HGF_RAT	Hgf	Hepatocyte growth factor	1	ESWVLTAR	ESWVLTAR	2	ESWVLTAR2	12276.9	7963.34	6721.89
M0R3X3	M0R3X3	M0R3X3_RAT	Arhgef10	Rho guanine nucleotide exchange factor 10	1	ESWVSSLQMAK	ESWVSSLQMAK	2	ESWVSSLQMAK2	5331.76		4137.88
P08650	P08650	CO5_RAT	C5	Complement C5	1	ESYAGVTLDPR	ESYAGVTLDPR	2	ESYAGVTLDPR2	205799	135553	164615
B2RZ78	B2RZ78	VPS29_RAT	Vps29	Vacuolar protein sorting-associated protein 29	1	ESYDYLK	ESYDYLK	2	ESYDYLK2	45625.9	51832.6	39286
Q5XIG4	Q5XIG4	OCAD1_RAT	Ociad1	OCIA domain-containing protein 1	1	ESYGVTLSHK	ESYGVTLSHK	2	ESYGVTLSHK2	4856.54	3297.14	
P59622	P59622	SLAP1_RAT	Sla	Src-like-adapter	1	ESYIPGICVAR	ESYIPGIC(UniMod:4)VAR	2	ESYIPGIC(UniMod:4)VAR2	24391.2	26636.1	28633.4
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	ESYMATFYEFFNEQK	ESYMATFYEFFNEQK	2	ESYMATFYEFFNEQK2	49918.9	71875.4	45477.1
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	ESYMATFYEFFNEQK	ESYMATFYEFFNEQK	3	ESYMATFYEFFNEQK3	26840.9	32499.6	25194.5
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	ESYNTQQLALEQLHK	ESYNTQQLALEQLHK	3	ESYNTQQLALEQLHK3	8056.22	7599.56	6623.4
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	ESYNVQLQLPAR	ESYNVQLQLPAR	2	ESYNVQLQLPAR2	85718.8	84099.9	91973.8
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	ESYNVQLQLPAR	ESYNVQLQLPAR	3	ESYNVQLQLPAR3	3478.29	4880.31	4291.96
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	ESYPTYTLVVQAADLQGEGLSTTAK	ESYPTYTLVVQAADLQGEGLSTTAK	3	ESYPTYTLVVQAADLQGEGLSTTAK3	51926.3	57843.6	56294
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	ESYQMGHMR	ESYQMGHMR	2	ESYQMGHMR2	14657.8	6334.84	8118.5
D3ZNZ9;M0RBQ5	D3ZNZ9;M0RBQ5	D3ZNZ9_RAT;M0RBQ5_RAT	H2bu1;Hist3h2ba	Histone H2B	0	ESYSIYVYK	ESYSIYVYK	2	ESYSIYVYK2	10233.3	2610.48	4731
Q00715	Q00715;A0A8I6A2W1;A0A8I6AGQ8;A0A8I5ZLH6;A0A8I6A7P3;A0A8I5ZSA8;A0A8I6AFW8;G3V9C7	H2B1_RAT		Histone H2B type 1	0	ESYSVYVYK	ESYSVYVYK	2	ESYSVYVYK2	44492.3	27183.5	31998.9
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	ESYVETELIFALAK	ESYVETELIFALAK	2	ESYVETELIFALAK2	270940	258982	264671
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	ESYVETELIFALAK	ESYVETELIFALAK	3	ESYVETELIFALAK3	47641.5	55338.7	61260.4
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	ESYVNLCSNPEDK	ESYVNLC(UniMod:4)SNPEDK	2	ESYVNLC(UniMod:4)SNPEDK2	6748.27	7285.65	5907.18
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	ETAAATFFSSSCVPCADGK	ETAAATFFSSSC(UniMod:4)VPC(UniMod:4)ADGK	3	ETAAATFFSSSC(UniMod:4)VPC(UniMod:4)ADGK3	56203.2	58597.2	68325.1
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	ETAAPVVPELSSDIDSSNFDDIEDDK	ETAAPVVPELSSDIDSSNFDDIEDDK	3	ETAAPVVPELSSDIDSSNFDDIEDDK3	17476.2	13169.9	15772.1
Q9ES54	Q9ES54	NPL4_RAT	Nploc4	Nuclear protein localization protein 4 homolog	1	ETAATFLK	ETAATFLK	2	ETAATFLK2	6355.05	12393.6	3116.4
Q9QYL8	Q9QYL8	LYPA2_RAT	Lypla2	Acyl-protein thioesterase 2	1	ETAAVIFLHGLGDTGHSWADALSTIR	ETAAVIFLHGLGDTGHSWADALSTIR	3	ETAAVIFLHGLGDTGHSWADALSTIR3	2272.79	2419.51	
Q9QYL8	Q9QYL8	LYPA2_RAT	Lypla2	Acyl-protein thioesterase 2	1	ETAAVIFLHGLGDTGHSWADALSTIR	ETAAVIFLHGLGDTGHSWADALSTIR	4	ETAAVIFLHGLGDTGHSWADALSTIR4	6637.12	5091.6	3759.51
P08650	P08650	CO5_RAT	C5	Complement C5	1	ETACKPEIAYAYK	ETAC(UniMod:4)KPEIAYAYK	2	ETAC(UniMod:4)KPEIAYAYK2	20087.2	11916	4489.12
P08650	P08650	CO5_RAT	C5	Complement C5	1	ETACKPEIAYAYK	ETAC(UniMod:4)KPEIAYAYK	3	ETAC(UniMod:4)KPEIAYAYK3	431348	302966	308843
A0A8I6A8L3	A0A8I6A8L3	A0A8I6A8L3_RAT	Dnpep	Aspartyl aminopeptidase	1	ETACTTGVLQTLTLFK	ETAC(UniMod:4)TTGVLQTLTLFK	2	ETAC(UniMod:4)TTGVLQTLTLFK2	11804.5	17574.3	17904.6
A0A8I6A8L3	A0A8I6A8L3	A0A8I6A8L3_RAT	Dnpep	Aspartyl aminopeptidase	1	ETACTTGVLQTLTLFK	ETAC(UniMod:4)TTGVLQTLTLFK	3	ETAC(UniMod:4)TTGVLQTLTLFK3	2112.43		2547.8
B2RZ37	B2RZ37	REEP5_RAT	Reep5	Receptor expression-enhancing protein 5	1	ETADAISK	ETADAISK	1	ETADAISK1	12007.2	8540.54	
B2RZ37	B2RZ37	REEP5_RAT	Reep5	Receptor expression-enhancing protein 5	1	ETADAISK	ETADAISK	2	ETADAISK2	798929	986692	
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	ETADTDTADQVMASFK	ETADTDTADQVMASFK	2	ETADTDTADQVMASFK2	600201	707287	651076
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	ETADTDTADQVMASFK	ETADTDTADQVMASFK	3	ETADTDTADQVMASFK3	159775	173993	154785
Q5U1Z2	Q5U1Z2	TPPC3_RAT	Trappc3	Trafficking protein particle complex subunit 3	1	ETADVIAK	ETADVIAK	2	ETADVIAK2	19136.3	16995.7	22241.7
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	ETAEAYLGK	ETAEAYLGK	2	ETAEAYLGK2	1.2473e+06	1.1397e+06	1.17431e+06
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	ETAEAYLGKK	ETAEAYLGKK	2	ETAEAYLGKK2	68788.5	80184.5	84885
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	ETAEEEKDDLEER	ETAEEEKDDLEER	2	ETAEEEKDDLEER2	1277.88		
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	ETAEEEKDDLEER	ETAEEEKDDLEER	3	ETAEEEKDDLEER3	11648.2	14429	17395.7
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	ETAENNLK	ETAENNLK	2	ETAENNLK2	17461.9		16806.6
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	ETAENYLGHTAK	ETAENYLGHTAK	2	ETAENYLGHTAK2	16148.5	5630.46	13203.1
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	ETAENYLGHTAK	ETAENYLGHTAK	3	ETAENYLGHTAK3	76279.8	88859.7	84044.8
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	ETAESVLK	ETAESVLK	2	ETAESVLK2	325167	300852	305904
P43884	P43884	PLIN1_RAT	Plin1	Perilipin-1	1	ETAEYAANTR	ETAEYAANTR	2	ETAEYAANTR2	2273.6		3334.84
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	ETAGELLLGK	ETAGELLLGK	2	ETAGELLLGK2	18254.7	29686	9783.23
Q641Y2	Q641Y2	NDUS2_RAT	Ndufs2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	1	ETAHWKPPPWNDVDVLK	ETAHWKPPPWNDVDVLK	3	ETAHWKPPPWNDVDVLK3	11473.1	13816.8	8969.81
Q641Y2	Q641Y2	NDUS2_RAT	Ndufs2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	1	ETAHWKPPPWNDVDVLK	ETAHWKPPPWNDVDVLK	4	ETAHWKPPPWNDVDVLK4	29077.1	36599.8	39197.9
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	ETALLIDPK	ETALLIDPK	2	ETALLIDPK2	12804.1	12411.7	13670.5
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	ETALQLAIK	ETALQLAIK	2	ETALQLAIK2	29224.4	13486.3	21243.4
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	ETALQQK	ETALQQK	2	ETALQQK2	56987.4		51519.1
P70483	P70483	STRN_RAT	Strn	Striatin	1	ETAMIGK	ETAMIGK	1	ETAMIGK1	4978.92	7387.11	3257.16
A0A0G2KAH7	A0A0G2KAH7	A0A0G2KAH7_RAT	Ext2	Exostosin glycosyltransferase 2	1	ETAQALAQLPR	ETAQALAQLPR	2	ETAQALAQLPR2	2067.12	3931.52	
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	ETASVSQQPGSSR	ETASVSQQPGSSR	2	ETASVSQQPGSSR2	179629		157514
Q5RKJ1	Q5RKJ1	MAEA_RAT	Maea	E3 ubiquitin-protein transferase MAEA	1	ETATCLAWCHDNK	ETATC(UniMod:4)LAWC(UniMod:4)HDNK	3	ETATC(UniMod:4)LAWC(UniMod:4)HDNK3	718.673	1948.23	4126.81
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	ETAVALQSR	ETAVALQSR	2	ETAVALQSR2	160050	135125	158659
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	ETAVESSGPK	ETAVESSGPK	2	ETAVESSGPK2	12821.8		30875.2
G3V762	G3V762	G3V762_RAT	Gfus	GDP-L-fucose synthase	1	ETCAWFTENYEQAR	ETC(UniMod:4)AWFTENYEQAR	2	ETC(UniMod:4)AWFTENYEQAR2		5456.38	
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	ETCDVIINTLGK	ETC(UniMod:4)DVIINTLGK	2	ETC(UniMod:4)DVIINTLGK2	78765.4	63820.7	65279.5
P21674	P21674	FST_RAT	Fst	Follistatin	1	ETCENVDCGPGK	ETC(UniMod:4)ENVDC(UniMod:4)GPGK	2	ETC(UniMod:4)ENVDC(UniMod:4)GPGK2		4928.71	
P21674	P21674	FST_RAT	Fst	Follistatin	1	ETCENVDCGPGKK	ETC(UniMod:4)ENVDC(UniMod:4)GPGKK	3	ETC(UniMod:4)ENVDC(UniMod:4)GPGKK3			4527.18
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	ETCLITFLLAGIECPR	ETC(UniMod:4)LITFLLAGIEC(UniMod:4)PR	2	ETC(UniMod:4)LITFLLAGIEC(UniMod:4)PR2		3504.27	3129.35
P97682	P97682	ESM1_RAT	Esm1	Endothelial cell-specific molecule 1	1	ETCNCQSGICDR	ETC(UniMod:4)NC(UniMod:4)QSGIC(UniMod:4)DR	2	ETC(UniMod:4)NC(UniMod:4)QSGIC(UniMod:4)DR2	7068.84	5141.99	3048.09
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	ETCQGSLISDQWVLTAAHCFHDAQMEDR	ETC(UniMod:4)QGSLISDQWVLTAAHC(UniMod:4)FHDAQMEDR	4	ETC(UniMod:4)QGSLISDQWVLTAAHC(UniMod:4)FHDAQMEDR4	10459.5	6302.95	6319.42
Q99MI5	Q99MI5	Q99MI5_RAT	Srm	Spermidine synthase	1	ETCSLWPGQALSLQVEQLLHHR	ETC(UniMod:4)SLWPGQALSLQVEQLLHHR	3	ETC(UniMod:4)SLWPGQALSLQVEQLLHHR3	6466.82		
Q99MI5	Q99MI5	Q99MI5_RAT	Srm	Spermidine synthase	1	ETCSLWPGQALSLQVEQLLHHR	ETC(UniMod:4)SLWPGQALSLQVEQLLHHR	4	ETC(UniMod:4)SLWPGQALSLQVEQLLHHR4	11383.3	9561.19	9948.1
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	ETCSTLTESPR	ETC(UniMod:4)STLTESPR	2	ETC(UniMod:4)STLTESPR2	20084	18887.6	18334.6
P82808	Q4KMC4;P82808	GFPT1_RAT	Gfpt1	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1	0	ETDCGVHINAGPEIGVASTK	ETDC(UniMod:4)GVHINAGPEIGVASTK	3	ETDC(UniMod:4)GVHINAGPEIGVASTK3	3346.17	2213.72	2611.55
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	ETDDTLVLSFVGQTR	ETDDTLVLSFVGQTR	2	ETDDTLVLSFVGQTR2	7262.1	5752.46	9098.97
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	ETDFEHR	ETDFEHR	2	ETDFEHR2	5333.29	1975.51	4739.18
Q3KR59	Q3KR59	UBP10_RAT	Usp10	Ubiquitin carboxyl-terminal hydrolase 10	1	ETDFEQPCLPTDNLLR	ETDFEQPC(UniMod:4)LPTDNLLR	2	ETDFEQPC(UniMod:4)LPTDNLLR2	9215.07	9255.78	13166.9
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	ETDGSETPEPFAAEAK	ETDGSETPEPFAAEAK	2	ETDGSETPEPFAAEAK2	81544.4	72997.4	86956.9
Q80Z30	Q80Z30	PPM1E_RAT	Ppm1e	Protein phosphatase 1E	1	ETDGTEGTVEIETVK	ETDGTEGTVEIETVK	2	ETDGTEGTVEIETVK2	26486.2	38843.4	19273.9
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	ETDHMLQVLK	ETDHMLQVLK	2	ETDHMLQVLK2	8792.03	12537.4	16636.8
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	ETDHMLQVLK	ETDHMLQVLK	3	ETDHMLQVLK3	110051	108056	97445.8
O70257	O70257	STX7_RAT	Stx7	Syntaxin-7	1	ETDKYIK	ETDKYIK	2	ETDKYIK2	4739.15	5448.31	
Q62825	Q62825	EXOC3_RAT	Exoc3	Exocyst complex component 3	1	ETDLEAVATAVQR	ETDLEAVATAVQR	2	ETDLEAVATAVQR2	11146.9	8214.24	2237.64
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	ETDLFSETSSIR	ETDLFSETSSIR	2	ETDLFSETSSIR2	19333.9	18976.1	18321.8
Q9R063	Q9R063	PRDX5_RAT	Prdx5	Peroxiredoxin-5, mitochondrial	1	ETDLLLDDSLVSLFGNR	ETDLLLDDSLVSLFGNR	2	ETDLLLDDSLVSLFGNR2	21429.3	26882	16990.4
Q9R063	Q9R063	PRDX5_RAT	Prdx5	Peroxiredoxin-5, mitochondrial	1	ETDLLLDDSLVSLFGNR	ETDLLLDDSLVSLFGNR	3	ETDLLLDDSLVSLFGNR3	6247.42	7712.58	6462.02
Q9R063	Q9R063	PRDX5_RAT	Prdx5	Peroxiredoxin-5, mitochondrial	1	ETDLLLDDSLVSLFGNRR	ETDLLLDDSLVSLFGNRR	3	ETDLLLDDSLVSLFGNRR3	97876.5	109319	78636.9
Q5RK09	Q5RK09	EIF3G_RAT	Eif3g	Eukaryotic translation initiation factor 3 subunit G	1	ETDLQELFR	ETDLQELFR	2	ETDLQELFR2	18674.3	12464.3	17523.3
Q5RK09	Q5RK09	EIF3G_RAT	Eif3g	Eukaryotic translation initiation factor 3 subunit G	1	ETDLQELFRPFGSISR	ETDLQELFRPFGSISR	3	ETDLQELFRPFGSISR3	195128	139227	132353
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	ETDWLRNEMNK	ETDWLRNEMNK	2	ETDWLRNEMNK2	4567.19	12836.1	6483.1
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	ETDWLRNEMNK	ETDWLRNEMNK	3	ETDWLRNEMNK3	394951	552829	609314
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	ETDWPFCSDEDWNHK	ETDWPFC(UniMod:4)SDEDWNHK	3	ETDWPFC(UniMod:4)SDEDWNHK3	191231	174981	216434
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	ETDWPFCSDEDWNHKCPSGCR	ETDWPFC(UniMod:4)SDEDWNHKC(UniMod:4)PSGC(UniMod:4)R	3	ETDWPFC(UniMod:4)SDEDWNHKC(UniMod:4)PSGC(UniMod:4)R3	63192.6	70742	51508
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	ETDWPFCSDEDWNHKCPSGCR	ETDWPFC(UniMod:4)SDEDWNHKC(UniMod:4)PSGC(UniMod:4)R	4	ETDWPFC(UniMod:4)SDEDWNHKC(UniMod:4)PSGC(UniMod:4)R4	90831	110068	121743
P51794	P51794	CLCN4_RAT	Clcn4	H(+)/Cl(-) exchange transporter 4	1	ETDYNGFPVVVSR	ETDYNGFPVVVSR	2	ETDYNGFPVVVSR2	27337	26879.5	32856.2
D3ZZB2	D3ZZB2	D3ZZB2_RAT	Pex1	Peroxisomal ATPase PEX1	1	ETEAFVAR	ETEAFVAR	2	ETEAFVAR2	7337.05	4765.34	5681.25
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	ETEATNETDISEESCGHHLLQK	ETEATNETDISEESC(UniMod:4)GHHLLQK	3	ETEATNETDISEESC(UniMod:4)GHHLLQK3		4761.58	986.063
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	ETEATNETDISEESCGHHLLQK	ETEATNETDISEESC(UniMod:4)GHHLLQK	4	ETEATNETDISEESC(UniMod:4)GHHLLQK4	27132.2	29324.7	30473.8
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	ETECTYFSTPLLLGK	ETEC(UniMod:4)TYFSTPLLLGK	2	ETEC(UniMod:4)TYFSTPLLLGK2	198862	215511	231162
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	ETECTYFSTPLLLGK	ETEC(UniMod:4)TYFSTPLLLGK	3	ETEC(UniMod:4)TYFSTPLLLGK3	24056	21555.4	18484.9
A0A8I6A5F4	A0A8I6A5F4	A0A8I6A5F4_RAT	Tmem40	Transmembrane protein 40	1	ETEDLNHPETEFHK	ETEDLNHPETEFHK	2	ETEDLNHPETEFHK2	1758.72	1572.2	3873.35
A0A8I6A5F4	A0A8I6A5F4	A0A8I6A5F4_RAT	Tmem40	Transmembrane protein 40	1	ETEDLNHPETEFHK	ETEDLNHPETEFHK	3	ETEDLNHPETEFHK3	84661.9	73554.2	70935.5
A0A8I6A5F4	A0A8I6A5F4	A0A8I6A5F4_RAT	Tmem40	Transmembrane protein 40	1	ETEDLNHPETEFHK	ETEDLNHPETEFHK	4	ETEDLNHPETEFHK4	50230.8	67579.2	62114.6
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	ETEDYLNSLLEGCLK	ETEDYLNSLLEGC(UniMod:4)LK	2	ETEDYLNSLLEGC(UniMod:4)LK2	13220.7	14698	17706.1
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	ETEDYLNSLLEGCLK	ETEDYLNSLLEGC(UniMod:4)LK	3	ETEDYLNSLLEGC(UniMod:4)LK3	9154.85	9077.3	15104.4
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	ETEELMAWMR	ETEELMAWMR	2	ETEELMAWMR2	8555.53	10193.6	13176
Q63515	Q63515	C4BPB_RAT	C4bpb	C4b-binding protein beta chain	1	ETEEQILGIYLCIK	ETEEQILGIYLC(UniMod:4)IK	2	ETEEQILGIYLC(UniMod:4)IK2	206790	365817	189741
Q63515	Q63515	C4BPB_RAT	C4bpb	C4b-binding protein beta chain	1	ETEEQILGIYLCIK	ETEEQILGIYLC(UniMod:4)IK	3	ETEEQILGIYLC(UniMod:4)IK3	18805	59609.5	32866
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	ETEGDVTSVK	ETEGDVTSVK	2	ETEGDVTSVK2	120814	78795.6	93177.2
D4A731	D4A731	D4A731_RAT	Ankib1	RBR-type E3 ubiquitin transferase	1	ETEGGCPDTTFIEDAVHVLLK	ETEGGC(UniMod:4)PDTTFIEDAVHVLLK	3	ETEGGC(UniMod:4)PDTTFIEDAVHVLLK3	4163.58	8699.27	3541.65
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	ETEGKIPK	ETEGKIPK	2	ETEGKIPK2			12039.9
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ETEGNVPPAETFVSAK	ETEGNVPPAETFVSAK	2	ETEGNVPPAETFVSAK2	13266.1	8342.69	18072.8
A0A8I6A8L3	A0A8I6A8L3	A0A8I6A8L3_RAT	Dnpep	Aspartyl aminopeptidase	1	ETEGWDILPENK	ETEGWDILPENK	2	ETEGWDILPENK2	121258	110399	113921
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ETEILAK	ETEILAK	2	ETEILAK2	17191.1	15800.9	12714.1
A0A8I6A5W7	A0A8I6A5W7	A0A8I6A5W7_RAT	Ccdc88a	Coiled coil domain containing 88A	1	ETEILQTDHK	ETEILQTDHK	3	ETEILQTDHK3	6770.51	4871.54	
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	ETELELAPAAGTAPLSETEVALAK	ETELELAPAAGTAPLSETEVALAK	3	ETELELAPAAGTAPLSETEVALAK3	10134.5	9034.4	6162.93
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	ETELELR	ETELELR	2	ETELELR2	106693	110480	107645
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	ETENDDLTNVIQK	ETENDDLTNVIQK	2	ETENDDLTNVIQK2	24044.7	32561.9	23658.3
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	ETEPISR	ETEPISR	2	ETEPISR2	150916	105758	128867
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	ETEQMQR	ETEQMQR	2	ETEQMQR2			17892.9
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	ETESASLDPQTK	ETESASLDPQTK	2	ETESASLDPQTK2	88086.6	86518.5	91656.3
A0A0G2K6J6	A0A0G2K6J6	A0A0G2K6J6_RAT	Ipo8	Importin 8	1	ETESDDVTNVIQK	ETESDDVTNVIQK	2	ETESDDVTNVIQK2	1538.58	2652.18	
A0A8I5ZY29	A0A8I5ZY29	A0A8I5ZY29_RAT	Usp14	Ubiquitin carboxyl-terminal hydrolase	1	ETESSSASAVTPSK	ETESSSASAVTPSK	2	ETESSSASAVTPSK2	6165.76	5534.98	4415.99
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	ETETFDMESLR	ETETFDMESLR	2	ETETFDMESLR2	115625	128971	104965
A0A0G2K1A4	A0A0G2K1A4	A0A0G2K1A4_RAT	Evi5l	Ecotropic viral integration site 5-like	1	ETETLGALR	ETETLGALR	2	ETETLGALR2	6499.45	13533.9	3956.96
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	ETETVFAPVIQAGMEALK	ETETVFAPVIQAGMEALK	2	ETETVFAPVIQAGMEALK2	7174.05	4905.53	10686.9
P34901	P34901	SDC4_RAT	Sdc4	Syndecan-4	1	ETEVIDPQDLLEGR	ETEVIDPQDLLEGR	2	ETEVIDPQDLLEGR2	17195.3	28405.8	22881.7
P15473	P15473	IBP3_RAT	Igfbp3	Insulin-like growth factor-binding protein 3	1	ETEYGPCR	ETEYGPC(UniMod:4)R	2	ETEYGPC(UniMod:4)R2	9583.06		2266.89
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	ETEYQALQETNMK	ETEYQALQETNMK	2	ETEYQALQETNMK2	7972.53	8837.22	
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	ETFDPEKETIPDIDPNAK	ETFDPEKETIPDIDPNAK	3	ETFDPEKETIPDIDPNAK3	174838	188434	189845
A0JPM9	A0JPM9	EIF3J_RAT	Eif3j	Eukaryotic translation initiation factor 3 subunit J	1	ETFGVNNTVYGIDAMNPSSR	ETFGVNNTVYGIDAMNPSSR	3	ETFGVNNTVYGIDAMNPSSR3	50931	62496.6	67635.5
G3V784	G3V784	G3V784_RAT	Adpgk	ADP-dependent glucokinase	1	ETFHDIAQAASEFPGAQHYVGGNAALIGQK	ETFHDIAQAASEFPGAQHYVGGNAALIGQK	4	ETFHDIAQAASEFPGAQHYVGGNAALIGQK4	16999.6	20877.1	17743.2
A0A8I6AKR4	A0A8I6AKR4	A0A8I6AKR4_RAT	Ap3s1	Adaptor related protein complex 3 subunit sigma 1	1	ETFHLVSK	ETFHLVSK	2	ETFHLVSK2	14723.9	13899.7	6505.35
Q9JJ05	Q9JJ05	C1GLT_RAT	C1galt1	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1	1	ETFHPFVPEHHLIK	ETFHPFVPEHHLIK	4	ETFHPFVPEHHLIK4	15682.2	19554.1	19363.6
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	ETFITGLDAPR	ETFITGLDAPR	2	ETFITGLDAPR2	1.16385e+06	1.4046e+06	1.34773e+06
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	ETFITGLDAPR	ETFITGLDAPR	3	ETFITGLDAPR3	5749.56	9683.89	7437.72
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	ETFLDPFVLR	ETFLDPFVLR	2	ETFLDPFVLR2	139483	145069	172734
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	ETFLSADER	ETFLSADER	2	ETFLSADER2	16985.4	10071.4	17303
B0BN63	B0BN63	B0BN63_RAT	Ahsa1	Activator of Hsp90 ATPase activity 1	1	ETFLTSPEELYR	ETFLTSPEELYR	2	ETFLTSPEELYR2	36381.5	23400.5	44875
P55213	P55213	CASP3_RAT	Casp3	Caspase-3	1	ETFMALK	ETFMALK	2	ETFMALK2	72454.5	54927.8	58723.2
P18292	P18292	THRB_RAT	F2	Prothrombin	1	ETFMDCLEGR	ETFMDC(UniMod:4)LEGR	2	ETFMDC(UniMod:4)LEGR2	19772.3	29379.6	22490.3
D3ZBW5	D3ZBW5	D3ZBW5_RAT	LOC685203	Small membrane A-kinase anchor protein	1	ETFPFPTTLDIDK	ETFPFPTTLDIDK	2	ETFPFPTTLDIDK2	11508.7	20434.8	18225.1
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	ETFSSNK	ETFSSNK	1	ETFSSNK1	44890.3		145895
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	ETFSSNK	ETFSSNK	2	ETFSSNK2	2.95552e+06		1.57481e+06
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	ETFSSNKK	ETFSSNKK	2	ETFSSNKK2			25773.4
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	ETFTSWPHVGYR	ETFTSWPHVGYR	3	ETFTSWPHVGYR3	21818.8	27614.8	26861.7
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	ETFTYEWTVPK	ETFTYEWTVPK	2	ETFTYEWTVPK2	594862	434003	416076
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	ETGAIGQER	ETGAIGQER	2	ETGAIGQER2	52944.4	73766.8	
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	ETGALAAAK	ETGALAAAK	2	ETGALAAAK2	22636	19213.5	19947.1
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	ETGANLAICQWGFDDEANHLLLQNGLPAVR	ETGANLAIC(UniMod:4)QWGFDDEANHLLLQNGLPAVR	4	ETGANLAIC(UniMod:4)QWGFDDEANHLLLQNGLPAVR4	2696.73		
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	ETGASSFLCR	ETGASSFLC(UniMod:4)R	2	ETGASSFLC(UniMod:4)R2	3899.37	7832.77	8802.82
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	ETGDEYR	ETGDEYR	2	ETGDEYR2			16305.1
A0A8I5ZMX2	A0A8I5ZMX2	A0A8I5ZMX2_RAT	Adamts3	ADAM metallopeptidase with thrombospondin type 1, motif 3	1	ETGDVAYMK	ETGDVAYMK	2	ETGDVAYMK2	10661.3	15294.6	11872.9
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	ETGEHLVHVK	ETGEHLVHVK	2	ETGEHLVHVK2	135857	158849	99358
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	ETGEHLVHVK	ETGEHLVHVK	3	ETGEHLVHVK3	2.85335e+06	3.95907e+06	4.5724e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	ETGEHLVHVKK	ETGEHLVHVKK	2	ETGEHLVHVKK2	925.884		3036.2
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	ETGEHLVHVKK	ETGEHLVHVKK	3	ETGEHLVHVKK3	10837.9		18673.4
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	ETGENDVSLLELEK	ETGENDVSLLELEK	2	ETGENDVSLLELEK2	21575.4	12811.9	8750.03
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	ETGENDVSLLELEKPLQCPIPALPVCVPER	ETGENDVSLLELEKPLQC(UniMod:4)PIPALPVC(UniMod:4)VPER	4	ETGENDVSLLELEKPLQC(UniMod:4)PIPALPVC(UniMod:4)VPER4	428974	371672	406324
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	ETGERPSNEEIMR	ETGERPSNEEIMR	3	ETGERPSNEEIMR3	81467.9	87152.5	89554.5
A0A1W2Q642	A0A1W2Q642	A0A1W2Q642_RAT	Pi16	Peptidase inhibitor 16	1	ETGIPSLATSESLHFSSVTK	ETGIPSLATSESLHFSSVTK	3	ETGIPSLATSESLHFSSVTK3	37508.9	29296.1	34910.6
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	ETGITDEEQAISR	ETGITDEEQAISR	2	ETGITDEEQAISR2	18392.1	19121	10227.9
D3ZHR2	D3ZHR2	ABCD1_RAT	Abcd1	ATP-binding cassette sub-family D member 1	1	ETGLLALHSAALVSR	ETGLLALHSAALVSR	3	ETGLLALHSAALVSR3	5721.43	11060	
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	ETGLMAFTNLK	ETGLMAFTNLK	2	ETGLMAFTNLK2	264793	241374	217852
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	ETGLMAFTNLK	ETGLMAFTNLK	3	ETGLMAFTNLK3	148121	163321	205976
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	ETGLMAFTNLKIK	ETGLMAFTNLKIK	2	ETGLMAFTNLKIK2	11029	10135.1	4644.3
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	ETGLMAFTNLKIK	ETGLMAFTNLKIK	3	ETGLMAFTNLKIK3	92340.1	49445.1	22977.8
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	ETGLSHLCEFIEDCEFTVLATR	ETGLSHLC(UniMod:4)EFIEDC(UniMod:4)EFTVLATR	3	ETGLSHLC(UniMod:4)EFIEDC(UniMod:4)EFTVLATR3	7383.9	9061.46	3550.51
P14630	P14630	APOM_RAT	Apom	Apolipoprotein M	1	ETGQGYQR	ETGQGYQR	1	ETGQGYQR1			10779.3
P14630	P14630	APOM_RAT	Apom	Apolipoprotein M	1	ETGQGYQR	ETGQGYQR	2	ETGQGYQR2			1.6609e+06
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	ETGQIVAIK	ETGQIVAIK	2	ETGQIVAIK2	191084	51216.9	215034
A0A0G2JVT8	A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	1	ETGQNEEQEPSIMK	ETGQNEEQEPSIMK	2	ETGQNEEQEPSIMK2	3250.25	2818.92	3384.44
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	ETGSAPEPIR	ETGSAPEPIR	2	ETGSAPEPIR2	117589	120711	118306
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	ETGSGGWPNGLTVDYLEK	ETGSGGWPNGLTVDYLEK	2	ETGSGGWPNGLTVDYLEK2	79338.9	94761.3	64919.5
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	ETGSGGWPNGLTVDYLEKR	ETGSGGWPNGLTVDYLEKR	3	ETGSGGWPNGLTVDYLEKR3	13897.2	32216.4	29056.4
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	ETGSLSLK	ETGSLSLK	2	ETGSLSLK2	39018.4	34574.5	39887.6
O55004	O55004	RNAS4_RAT	Rnase4	Ribonuclease 4	1	ETGSSVPHNCR	ETGSSVPHNC(UniMod:4)R	3	ETGSSVPHNC(UniMod:4)R3			43301.3
A0A8I6A8Y4	A0A8I6A8Y4	A0A8I6A8Y4_RAT	Mtres1	Mitochondrial transcription rescue factor 1	1	ETGTEVVMR	ETGTEVVMR	2	ETGTEVVMR2	7479.4	4932.69	6192.61
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	ETGTLESQLEANK	ETGTLESQLEANK	2	ETGTLESQLEANK2	6147.32	3375.29	3547.53
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	ETGTLESQLEANKR	ETGTLESQLEANKR	3	ETGTLESQLEANKR3	7270.24	5514.23	5845.44
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	ETGVDLTK	ETGVDLTK	2	ETGVDLTK2	78750.3	69545.5	80060.6
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	ETGVQIAGR	ETGVQIAGR	2	ETGVQIAGR2	83525.1	62352.7	84238.4
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	ETGWASFSEFTSSLSTK	ETGWASFSEFTSSLSTK	2	ETGWASFSEFTSSLSTK2	25726.8	42865.4	38234.7
F1LMI3	F1LMI3	F1LMI3_RAT	Cdh3	Cadherin 3	1	ETGWLLLNMPLDR	ETGWLLLNMPLDR	2	ETGWLLLNMPLDR2	7928.06		8055.57
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	ETGYPLAVK	ETGYPLAVK	1	ETGYPLAVK1	6516.57	4161.69	2196.18
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	ETGYPLAVK	ETGYPLAVK	2	ETGYPLAVK2	557343	605556	651111
A0A096MKE0	A0A096MKE0	A0A096MKE0_RAT	Asph	Aspartate-beta-hydroxylase	1	ETGYTELVK	ETGYTELVK	2	ETGYTELVK2	14827.2	23807.7	17995.7
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	ETHADLWPAK	ETHADLWPAK	2	ETHADLWPAK2	37649.1	37546.2	33557.5
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	ETHADLWPAK	ETHADLWPAK	3	ETHADLWPAK3	305010	316967	302025
F7EM42	F7EM42	F7EM42_RAT	Sash3	SAM and SH3 domain containing 3	1	ETHLNELNIMDPQHR	ETHLNELNIMDPQHR	4	ETHLNELNIMDPQHR4	12879.6	20785.8	28206.8
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	ETHQQVVSR	ETHQQVVSR	2	ETHQQVVSR2			28550.5
Q499P8	Q499P8	RUSF1_RAT	Rusf1	RUS family member 1	1	ETHQVLDTLFPK	ETHQVLDTLFPK	3	ETHQVLDTLFPK3	6107.31	7340.39	9070.5
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	ETHSHVSPDTIK	ETHSHVSPDTIK	2	ETHSHVSPDTIK2	3247.71	5579.43	2107.47
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	ETHSHVSPDTIK	ETHSHVSPDTIK	3	ETHSHVSPDTIK3	492853	511407	
Q641X8	Q641X8;A0A0G2K273	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	0	ETIDNNSVSSPLQSLQQR	ETIDNNSVSSPLQSLQQR	3	ETIDNNSVSSPLQSLQQR3	6540.16	6745.48	5891.89
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	ETIEDVEEMLNNLPGVTSVHSR	ETIEDVEEMLNNLPGVTSVHSR	3	ETIEDVEEMLNNLPGVTSVHSR3	18693.3	14912	15043
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	ETIEDVEEMLNNLPGVTSVHSR	ETIEDVEEMLNNLPGVTSVHSR	4	ETIEDVEEMLNNLPGVTSVHSR4	7558.05	7805.8	5630.88
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	ETIEELR	ETIEELR	2	ETIEELR2	55008.4	57011.8	45361
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	ETIEIIDLAK	ETIEIIDLAK	2	ETIEIIDLAK2	3009.98	2689.79	5755.57
A0A8I6G6W8	A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	1	ETIEKPEEKPR	ETIEKPEEKPR	3	ETIEKPEEKPR3	8321.23		
B0BMY7	B0BMY7	B0BMY7_RAT	Twf2	Twinfilin actin-binding protein 2	1	ETIELVHTEPTNVAQLPSR	ETIELVHTEPTNVAQLPSR	3	ETIELVHTEPTNVAQLPSR3	29125.4	29554.7	15862.6
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	ETIEPAVR	ETIEPAVR	2	ETIEPAVR2	77144.8	55685.8	63157.4
P62329	P62329;A0A0G2K021;A0A8L2QPJ1;P63312;A0A8I6GL50	TYB4_RAT	Tmsb4x	Thymosin beta-4	0	ETIEQEK	ETIEQEK	1	ETIEQEK1	88523.3		79817.9
P62329	P62329;A0A0G2K021;A0A8L2QPJ1;P63312;A0A8I6GL50	TYB4_RAT	Tmsb4x	Thymosin beta-4	0	ETIEQEK	ETIEQEK	2	ETIEQEK2	3.01317e+06		2.98813e+06
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	ETIESLESK	ETIESLESK	2	ETIESLESK2	11776.1		13018.9
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	ETIFELEDQVEQHR	ETIFELEDQVEQHR	2	ETIFELEDQVEQHR2	8795.57	7509.46	10053.8
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	ETIFELEDQVEQHR	ETIFELEDQVEQHR	3	ETIFELEDQVEQHR3	153198	135757	183144
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	ETIFSISK	ETIFSISK	2	ETIFSISK2	245518	210568	270020
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	ETIIAFAWEPNGSK	ETIIAFAWEPNGSK	2	ETIIAFAWEPNGSK2	35064.6	52836.2	37531.1
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	ETIKDLPK	ETIKDLPK	2	ETIKDLPK2	2.17319e+06	1.65373e+06	1.89746e+06
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	ETILAECQGMIK	ETILAEC(UniMod:4)QGMIK	2	ETILAEC(UniMod:4)QGMIK2	3543.22	3684.58	5576.04
Q6Q0N0	Q6Q0N0	CSTN1_RAT	Clstn1	Calsyntenin-1	1	ETILCSSDK	ETILC(UniMod:4)SSDK	2	ETILC(UniMod:4)SSDK2	7189.8	4867.14	7036.22
A0A8I6ABN1	A0A8I6ABN1	A0A8I6ABN1_RAT	Snx19	Sorting nexin 19	1	ETIMLMTPGNFLSHR	ETIMLMTPGNFLSHR	3	ETIMLMTPGNFLSHR3	7659.53	4073.47	
F7EZE5	F7EZE5;A0A8I6ACC9;A0A0G2K5C5;A0A0G2K3P1;M0R5M7;A0A8I5Y9E6	F7EZE5_RAT	Btf3	Transcription factor BTF3	0	ETIMNQEK	ETIMNQEK	2	ETIMNQEK2	30662.3	27852	27936.7
Q5XI55	Q5XI55	NGLY1_RAT	Ngly1	Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase	1	ETINGLNK	ETINGLNK	2	ETINGLNK2	4321.27	3878.85	
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	ETIPAYILTVQATDR	ETIPAYILTVQATDR	2	ETIPAYILTVQATDR2	5126.91	4426.46	800.798
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	ETIPDIDPNAK	ETIPDIDPNAK	2	ETIPDIDPNAK2	17891.6		17007
P45479	P45479	PPT1_RAT	Ppt1	Palmitoyl-protein thioesterase 1	1	ETIPLQETTLYTEDR	ETIPLQETTLYTEDR	2	ETIPLQETTLYTEDR2	27644.4	20430.5	33898
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	ETIQALR	ETIQALR	2	ETIQALR2	46708.8	79616.5	60116.2
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	ETIQNLSR	ETIQNLSR	2	ETIQNLSR2	17912.8	26886.3	23764.9
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	ETISSTATLGFR	ETISSTATLGFR	2	ETISSTATLGFR2	9275.03	11309.4	6926.24
Q5I0H4	Q5I0H4	TMCO1_RAT	Tmco1	Calcium load-activated calcium channel	1	ETITESAGR	ETITESAGR	2	ETITESAGR2	16370	11991.4	
Q9Z2P5	Q9Z2P5	RIPK3_RAT	Ripk3	Receptor-interacting serine/threonine-protein kinase 3	1	ETIVYEMLDR	ETIVYEMLDR	2	ETIVYEMLDR2	8158.63	11485.7	10908
D4A9G5	D4A9G5	D4A9G5_RAT	Dpy19l3	Dpy-19 like C-mannosyltransferase 3	1	ETKPVEVSEDFPSPK	ETKPVEVSEDFPSPK	3	ETKPVEVSEDFPSPK3	13321.5	5913.22	11871.3
Q9QWE9	Q9QWE9	GGT5_RAT	Ggt5	Glutathione hydrolase 5 proenzyme	1	ETLAQHIR	ETLAQHIR	2	ETLAQHIR2	17869.9	18001.9	11033.1
Q6MGC4	Q6MGC4	Q6MGC4_RAT	Pfdn6	Prefoldin subunit 6	1	ETLAQLQQEFQR	ETLAQLQQEFQR	2	ETLAQLQQEFQR2	57890.5	62725.2	60045.2
Q6MGC4	Q6MGC4	Q6MGC4_RAT	Pfdn6	Prefoldin subunit 6	1	ETLAQLQQEFQR	ETLAQLQQEFQR	3	ETLAQLQQEFQR3	38276	27691.6	22349.2
D4AEK9	D4AEK9	D4AEK9_RAT	Ccdc6	Coiled-coil domain containing 6	1	ETLAVNYEK	ETLAVNYEK	2	ETLAVNYEK2	150966	138029	133808
D4AEK9	D4AEK9	D4AEK9_RAT	Ccdc6	Coiled-coil domain containing 6	1	ETLAVNYEKEEEFLTNELSR	ETLAVNYEKEEEFLTNELSR	3	ETLAVNYEKEEEFLTNELSR3	10112.8	9511.45	7960.35
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	ETLDEDDVLVYIPK	ETLDEDDVLVYIPK	2	ETLDEDDVLVYIPK2	50197.3	61357.2	62832.8
P47752	P47752	S1PR2_RAT	S1pr2	Sphingosine 1-phosphate receptor 2	1	ETLDMQETPSR	ETLDMQETPSR	2	ETLDMQETPSR2	6443.39	5182.74	5670.5
Q7TNI4	Q7TNI4	I22R2_RAT	Il22ra2	Interleukin-22 receptor subunit alpha-2	1	ETLDPYEPYYGR	ETLDPYEPYYGR	2	ETLDPYEPYYGR2	4941.56		5588.88
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	ETLDQQK	ETLDQQK	1	ETLDQQK1	752.065		3898.5
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	ETLDQQK	ETLDQQK	2	ETLDQQK2	41778		106203
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	ETLDQQKR	ETLDQQKR	2	ETLDQQKR2			6020.4
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	ETLDTLEK	ETLDTLEK	2	ETLDTLEK2	15549.4	11367.1	9591.8
Q3MIE7	Q3MIE7	Q3MIE7_RAT	Commd9	COMM domain containing 9	1	ETLDTMLDGLGR	ETLDTMLDGLGR	2	ETLDTMLDGLGR2	8444.37	9160.14	9571.83
Q66HG9	Q66HG9	MAVS_RAT	Mavs	Mitochondrial antiviral-signaling protein	1	ETLEAPATVVTTGSSLTRPDISSR	ETLEAPATVVTTGSSLTRPDISSR	3	ETLEAPATVVTTGSSLTRPDISSR3	437685	429517	429914
Q66HG9	Q66HG9	MAVS_RAT	Mavs	Mitochondrial antiviral-signaling protein	1	ETLEAPATVVTTGSSLTRPDISSR	ETLEAPATVVTTGSSLTRPDISSR	4	ETLEAPATVVTTGSSLTRPDISSR4		6146.18	
P23711	P23711	HMOX2_RAT	Hmox2	Heme oxygenase 2	1	ETLEDGLPVHDGK	ETLEDGLPVHDGK	2	ETLEDGLPVHDGK2	6942.27	5208	4983.41
P23711	P23711	HMOX2_RAT	Hmox2	Heme oxygenase 2	1	ETLEDGLPVHDGK	ETLEDGLPVHDGK	3	ETLEDGLPVHDGK3	38578.5	47008.4	33079.2
Q8R490	Q8R490	Q8R490_RAT	Cdh13	Cadherin 13	1	ETLENPK	ETLENPK	2	ETLENPK2	8312		
A0A8I5ZUI2	A0A8I5ZUI2	A0A8I5ZUI2_RAT	Ano10	Anoctamin	1	ETLENQNLYLVGASNIR	ETLENQNLYLVGASNIR	2	ETLENQNLYLVGASNIR2	12716	7438	9727.32
Q6AY97	Q6AY97	CCD91_RAT	Ccdc91	Coiled-coil domain-containing protein 91	1	ETLESAVK	ETLESAVK	2	ETLESAVK2	11659.5		13274.5
A0A0G2K8D1	A0A0G2K8D1	A0A0G2K8D1_RAT	Mospd2	Motile sperm domain containing 2	1	ETLETISNEEQPAQSEK	ETLETISNEEQPAQSEK	2	ETLETISNEEQPAQSEK2	15218.8	6534.09	9681.87
A0A0G2K8D1	A0A0G2K8D1	A0A0G2K8D1_RAT	Mospd2	Motile sperm domain containing 2	1	ETLETISNEEQPAQSEK	ETLETISNEEQPAQSEK	3	ETLETISNEEQPAQSEK3	6473.66	7225.89	8731.55
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	ETLEVSPFFK	ETLEVSPFFK	2	ETLEVSPFFK2	68560.1	119449	140627
A0A0G2JYA3	A0A0G2JYA3	A0A0G2JYA3_RAT	Sppl2a	Signal peptide peptidase-like 2A	1	ETLGDDITVK	ETLGDDITVK	2	ETLGDDITVK2	10612	6476.79	12310.7
B2RYD7	B2RYD7	B2RYD7_RAT	Stt3b	dolichyl-diphosphooligosaccharide--protein glycotransferase	1	ETLGHKPR	ETLGHKPR	2	ETLGHKPR2			3139.93
Q9JKC9	Q9JKC9	SYNRG_RAT	Synrg	Synergin gamma	1	ETLGQIWALANR	ETLGQIWALANR	2	ETLGQIWALANR2	10286.5		
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	ETLGVGYGCPEDSLISR	ETLGVGYGC(UniMod:4)PEDSLISR	2	ETLGVGYGC(UniMod:4)PEDSLISR2	25246.5	35698	33181.3
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	ETLHCPLNEEVIAQAR	ETLHC(UniMod:4)PLNEEVIAQAR	3	ETLHC(UniMod:4)PLNEEVIAQAR3	89165.7	97521.3	88352.8
F7ELS2	A0A8I6AGL9;F7ELS2;A0A8I6GM53	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	0	ETLIDVAR	ETLIDVAR	2	ETLIDVAR2	268503	169878	210691
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	ETLIIEPEK	ETLIIEPEK	2	ETLIIEPEK2	131352	123213	114874
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	ETLIQFLR	ETLIQFLR	2	ETLIQFLR2		1946.53	
A0A8I6G3S1	A0A8I6G3S1	A0A8I6G3S1_RAT	Mon1b	Vacuolar fusion protein MON1 homolog	1	ETLLAWVTSK	ETLLAWVTSK	2	ETLLAWVTSK2	3265.13		
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	ETLLCATLYALPIPPPGSSSEANK	ETLLC(UniMod:4)ATLYALPIPPPGSSSEANK	3	ETLLC(UniMod:4)ATLYALPIPPPGSSSEANK3	5736.43	5796.5	
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	ETLLDAIR	ETLLDAIR	2	ETLLDAIR2	88426.2	83372	81327.8
D3ZAR1	D3ZAR1	ARH_RAT	Ldlrap1	Low density lipoprotein receptor adapter protein 1	1	ETLLEGMVFSLK	ETLLEGMVFSLK	2	ETLLEGMVFSLK2	29879.9	24937	28855
Q5XHY5	Q5XHY5	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	1	ETLLEMFK	ETLLEMFK	2	ETLLEMFK2	1932.73		1338.91
Q75WE7	Q75WE7	VWA5A_RAT	Vwa5a	von Willebrand factor A domain-containing protein 5A	1	ETLLLLLK	ETLLLLLK	2	ETLLLLLK2	3877.25	3138.49	8891.22
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	ETLLNSATTSLNSK	ETLLNSATTSLNSK	2	ETLLNSATTSLNSK2	117798	103508	113396
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	ETLLNSATTSLNSK	ETLLNSATTSLNSK	3	ETLLNSATTSLNSK3	9192.47	12974.9	10925.7
Q9QYF3	Q9QYF3	MYO5A_RAT	Myo5a	Unconventional myosin-Va	1	ETLNHLMVEQAK	ETLNHLMVEQAK	3	ETLNHLMVEQAK3		4508.19	
Q9Z144	Q9Z144	LEG2_RAT	Lgals2	Galectin-2	1	ETLNLHFNPR	ETLNLHFNPR	3	ETLNLHFNPR3		6457.41	2042.51
P48450	P48450	LSS_RAT	Lss	Lanosterol synthase	1	ETLNQGLDFCR	ETLNQGLDFC(UniMod:4)R	2	ETLNQGLDFC(UniMod:4)R2	4574.2		7941.14
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	ETLPAEQDLTTK	ETLPAEQDLTTK	2	ETLPAEQDLTTK2	6.79076e+06	6.45711e+06	7.61811e+06
M0R9L0	M0R9L0	M0R9L0_RAT	Naca	Nascent polypeptide associated complex subunit alpha	1	ETLPEEVTAVPLEVSLPPK	ETLPEEVTAVPLEVSLPPK	3	ETLPEEVTAVPLEVSLPPK3	1366.48		
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	ETLPLLLQHLCQAHK	ETLPLLLQHLC(UniMod:4)QAHK	3	ETLPLLLQHLC(UniMod:4)QAHK3	10334.8	11211.9	11345.3
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	ETLPLLLQHLCQAHK	ETLPLLLQHLC(UniMod:4)QAHK	4	ETLPLLLQHLC(UniMod:4)QAHK4	12287.7	12342.5	20036.8
Q6V0K7	Q6V0K7	OIT3_RAT	Oit3	Oncoprotein-induced transcript 3 protein	1	ETLPTLK	ETLPTLK	2	ETLPTLK2	36822.5	28503.8	40389.2
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	ETLQDSEQEQPK	ETLQDSEQEQPK	2	ETLQDSEQEQPK2	98215.3	85976.6	93513.9
O70595	O70595	ABCB6_RAT	Abcb6	ATP-binding cassette sub-family B member 6	1	ETLQDVSFTVMPGQTVALVGPSGAGK	ETLQDVSFTVMPGQTVALVGPSGAGK	3	ETLQDVSFTVMPGQTVALVGPSGAGK3	17815.1	4529.93	
P0C2X9	P0C2X9	AL4A1_RAT	Aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1	ETLQLVDSTTSYGLTGAVFAQDK	ETLQLVDSTTSYGLTGAVFAQDK	3	ETLQLVDSTTSYGLTGAVFAQDK3	2950.38	9474.19	
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	ETLQQHK	ETLQQHK	1	ETLQQHK1			2746.05
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	ETLQQHK	ETLQQHK	2	ETLQQHK2			85608.2
P19814	P19814	TGON3_RAT	Ttgn1	Trans-Golgi network integral membrane protein TGN38	1	ETLQQLLPVDPK	ETLQQLLPVDPK	2	ETLQQLLPVDPK2	119583	98617.7	102480
P19814	P19814	TGON3_RAT	Ttgn1	Trans-Golgi network integral membrane protein TGN38	1	ETLQQLLPVDPKQEKSGQK	ETLQQLLPVDPKQEKSGQK	3	ETLQQLLPVDPKQEKSGQK3	5139.25		12886.7
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	ETLQYFSTLK	ETLQYFSTLK	2	ETLQYFSTLK2	10916.4	6802.88	8224.93
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	ETLSAKPYNPK	ETLSAKPYNPK	2	ETLSAKPYNPK2	82612.8	78258.8	73718.1
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	ETLSAKPYNPK	ETLSAKPYNPK	3	ETLSAKPYNPK3	2.51255e+06	2.78955e+06	3.07387e+06
A0A8I6AE36	A0A8I6AE36;Q9QYU1	A0A8I6AE36_RAT	ENSRNOG00000067472	Peroxisomal biogenesis factor 19	0	ETLSGLAK	ETLSGLAK	2	ETLSGLAK2	52690	40197.3	47108.9
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	ETLSLTVDAK	ETLSLTVDAK	2	ETLSLTVDAK2	41531.4	20412.9	20767.7
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	ETLSSAAK	ETLSSAAK	2	ETLSSAAK2		37054.4	22845.9
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	ETLSSSLEEQK	ETLSSSLEEQK	2	ETLSSSLEEQK2	17123.3	19807.8	13435.2
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	ETLSTQLDLAETK	ETLSTQLDLAETK	2	ETLSTQLDLAETK2	5410.49	6342.97	6743.77
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	ETLTEEMR	ETLTEEMR	2	ETLTEEMR2	8133.78	8246.42	9459.04
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	ETLVQDNIQWPTGLAVDYHNER	ETLVQDNIQWPTGLAVDYHNER	3	ETLVQDNIQWPTGLAVDYHNER3	28358.3	22616	22640.8
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	ETLVYLTHLDYVDTEIIMTK	ETLVYLTHLDYVDTEIIMTK	3	ETLVYLTHLDYVDTEIIMTK3	7133.35		5116.2
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	ETMCSSTNPIMAQCFDK	ETMC(UniMod:4)SSTNPIMAQC(UniMod:4)FDK	3	ETMC(UniMod:4)SSTNPIMAQC(UniMod:4)FDK3	38382.6	57032	48908.5
A0A8I5ZZ71	A0A8I5ZZ71	A0A8I5ZZ71_RAT	Mzt1	Mitotic spindle organizing protein 1	1	ETMDVLLEISR	ETMDVLLEISR	2	ETMDVLLEISR2		6408.49	
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	ETMHNMQLEVDLLK	ETMHNMQLEVDLLK	3	ETMHNMQLEVDLLK3	10429.4	4030.1	6037.39
D3ZVB7	D3ZVB7	D3ZVB7_RAT	Ogn	Osteoglycin	1	ETMIIPDEK	ETMIIPDEK	2	ETMIIPDEK2	69300.1	66080.4	67579.2
G3V901	G3V901	G3V901_RAT	Ext1	Exostosin glycosyltransferase 1	1	ETMMGQTSR	ETMMGQTSR	2	ETMMGQTSR2	5709.4	4709.32	6384.4
B2GV52	B2GV52	BL1S5_RAT	Bloc1s5	Biogenesis of lysosome-related organelles complex 1 subunit 5	1	ETMQGGLEETLQR	ETMQGGLEETLQR	2	ETMQGGLEETLQR2	6977.83	4131.57	
G3V7P1	G3V7P1	STX12_RAT	Stx12	Syntaxin-12	1	ETNELLK	ETNELLK	1	ETNELLK1	2628.72		
G3V7P1	G3V7P1	STX12_RAT	Stx12	Syntaxin-12	1	ETNELLK	ETNELLK	2	ETNELLK2	77463.2	68579.4	71977.9
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	ETNFQVMQMK	ETNFQVMQMK	2	ETNFQVMQMK2	57409.2	69309.6	67230.7
P31000	P31000	VIME_RAT	Vim	Vimentin	1	ETNLESLPLVDTHSK	ETNLESLPLVDTHSK	3	ETNLESLPLVDTHSK3	12920	8588.72	10347
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	ETNLLYDPLLSASSNQQR	ETNLLYDPLLSASSNQQR	3	ETNLLYDPLLSASSNQQR3	16901.6	11577.3	9225.42
Q80T18	Q80T18	GMFG_RAT	Gmfg	Glia maturation factor gamma	1	ETNNAAIIMK	ETNNAAIIMK	2	ETNNAAIIMK2	32300.7	23783.2	38599.5
F1M086	F1M7K9;F1M086	F1M086_RAT	Elp4	Elongator complex protein 4	0	ETNPLYK	ETNPLYK	2	ETNPLYK2	20293.7	16790.5	18937.1
Q2LC84	Q2LC84	NUMB_RAT	Numb	Protein numb homolog	1	ETNPWAHAPDAANK	ETNPWAHAPDAANK	3	ETNPWAHAPDAANK3	10135	15743.4	4678.31
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	ETNTLTTSDHYSVSR	ETNTLTTSDHYSVSR	3	ETNTLTTSDHYSVSR3	16946.2	16601.6	24571.3
A0A8I6GJC5	A0A8I6GJC5	A0A8I6GJC5_RAT	Reps1	RALBP1 associated Eps domain containing 1	1	ETNTVLAR	ETNTVLAR	2	ETNTVLAR2	11838.2	8824.25	9099.87
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	ETNVLAAAK	ETNVLAAAK	1	ETNVLAAAK1	1002.41	3444.14	2602.22
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	ETNVLAAAK	ETNVLAAAK	2	ETNVLAAAK2	78184.8	80521.6	90366.4
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	ETPAGGNLSPAPR	ETPAGGNLSPAPR	2	ETPAGGNLSPAPR2	54436.5	44176.9	53635.7
F1M9Q3	F1M9Q3	F1M9Q3_RAT	Ltn1	E3 ubiquitin-protein ligase listerin	1	ETPDTLSDPQTVPEEEREAK	ETPDTLSDPQTVPEEEREAK	3	ETPDTLSDPQTVPEEEREAK3	3341.79	4001.38	5215.83
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	ETPETEEDVGPVVQHIYELR	ETPETEEDVGPVVQHIYELR	3	ETPETEEDVGPVVQHIYELR3	88768.2	56434.5	75296.2
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	ETPIGLVPK	ETPIGLVPK	2	ETPIGLVPK2	361779	318325	353614
D4A5S6	D4A5S6	D4A5S6_RAT	Alg1	ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase	1	ETPLDLQHELFMK	ETPLDLQHELFMK	3	ETPLDLQHELFMK3	2400.96		5334
Q32KJ6	Q32KJ6	GALNS_RAT	Galns	N-acetylgalactosamine-6-sulfatase	1	ETPNLDR	ETPNLDR	2	ETPNLDR2	73641.4	78459.3	73240.4
Q6AYT7	Q6AYT7	ABD12_RAT	Abhd12	Lysophosphatidylserine lipase ABHD12	1	ETPPDALILESPFTNIR	ETPPDALILESPFTNIR	2	ETPPDALILESPFTNIR2	25853.2	16840.3	20435.2
Q6AYT7	Q6AYT7	ABD12_RAT	Abhd12	Lysophosphatidylserine lipase ABHD12	1	ETPPDALILESPFTNIR	ETPPDALILESPFTNIR	3	ETPPDALILESPFTNIR3	8302.06	3000.59	6988.25
Q6AYT7	Q6AYT7	ABD12_RAT	Abhd12	Lysophosphatidylserine lipase ABHD12	1	ETPPDALILESPFTNIREEAK	ETPPDALILESPFTNIREEAK	3	ETPPDALILESPFTNIREEAK3	4180.9	6489.16	3423.1
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	ETPSWTGVGFVR	ETPSWTGVGFVR	2	ETPSWTGVGFVR2	7840.31	12075.8	15888.9
Q5RKI1	Q5RKI1	IF4A2_RAT	Eif4a2	Eukaryotic initiation factor 4A-II	1	ETQALVLAPTR	ETQALVLAPTR	2	ETQALVLAPTR2	5517.05	2925.84	
A0A8I5ZXB9	A0A8I5ZXB9	A0A8I5ZXB9_RAT	Kifap3	Kinesin-associated protein 3	1	ETQAPAYLIDLMHDK	ETQAPAYLIDLMHDK	3	ETQAPAYLIDLMHDK3	4402.45	10078.9	3033.71
A0A0G2JWT6	A0A0G2JWT6	A0A0G2JWT6_RAT	Pex16	Peroxisomal membrane protein PEX16	1	ETQAQPLDGDHNLGSPEPSYVGK	ETQAQPLDGDHNLGSPEPSYVGK	3	ETQAQPLDGDHNLGSPEPSYVGK3	4067.21	3493.16	
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	ETQAQYQALER	ETQAQYQALER	2	ETQAQYQALER2	19825.8	27180.4	18355.6
Q62825	Q62825	EXOC3_RAT	Exoc3	Exocyst complex component 3	1	ETQDLIEQGALLQAHR	ETQDLIEQGALLQAHR	3	ETQDLIEQGALLQAHR3	11000.7	13167.8	7326.6
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	ETQDPTAQSLAASLSTR	ETQDPTAQSLAASLSTR	2	ETQDPTAQSLAASLSTR2	2932.72		2109.58
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	ETQETLALTQGK	ETQETLALTQGK	2	ETQETLALTQGK2	33879.6	27271.6	29901.2
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	ETQIESLIK	ETQIESLIK	2	ETQIESLIK2	9538.96	9566.16	
A0A8I5Y7Q0	A0A8I5Y7Q0	A0A8I5Y7Q0_RAT	Vps13b	Vacuolar protein sorting 13 homolog B	1	ETQIIPGR	ETQIIPGR	2	ETQIIPGR2	10284.2	3328.9	4368.04
E9PST5	E9PST5	E9PST5_RAT	Acin1	Apoptotic chromatin condensation inducer 1	1	ETQIVSLPQEENEVK	ETQIVSLPQEENEVK	2	ETQIVSLPQEENEVK2	7373.19	10623.5	8186.84
D3ZGG8	D3ZGG8	D3ZGG8_RAT	Hps3	Hermansky-Pudlak syndrome 3 protein homolog	1	ETQPGLLVASVLGLQK	ETQPGLLVASVLGLQK	2	ETQPGLLVASVLGLQK2	2638.97	2770.62	4158.67
O35093	A0A8I6A2G5;O35093	TIM23_RAT	Timm23	Mitochondrial import inner membrane translocase subunit Tim23	0	ETQSMPWSKPR	ETQSMPWSKPR	3	ETQSMPWSKPR3	20395.3	16143.4	21689.1
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	ETQSQLETER	ETQSQLETER	2	ETQSQLETER2	29380.1	20810.3	12487.3
P98193	P98193	DMP1_RAT	Dmp1	Dentin matrix acidic phosphoprotein 1	1	ETQSVSTEDFR	ETQSVSTEDFR	2	ETQSVSTEDFR2	159663	166330	147827
Q62871	Q62871	DC1I2_RAT	Dync1i2	Cytoplasmic dynein 1 intermediate chain 2	1	ETQTPVTAQPK	ETQTPVTAQPK	2	ETQTPVTAQPK2	209874	207217	199172
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	ETQYYDILGVKPSASPEEIK	ETQYYDILGVKPSASPEEIK	3	ETQYYDILGVKPSASPEEIK3	4192.78	3069.73	8785.62
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	ETQYYDILGVKPSASPEEIKK	ETQYYDILGVKPSASPEEIKK	3	ETQYYDILGVKPSASPEEIKK3	9534.08	9134.44	
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	ETQYYDILGVKPSASPEEIKK	ETQYYDILGVKPSASPEEIKK	4	ETQYYDILGVKPSASPEEIKK4	41659.7	33587	72359.7
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	ETSAFIAGAK	ETSAFIAGAK	2	ETSAFIAGAK2	18067.4	31868.7	26241.8
A0A8I5Y9A0	A0A8I5Y9A0	A0A8I5Y9A0_RAT	Tex264	Testis expressed 264	1	ETSATPFSPGASNR	ETSATPFSPGASNR	2	ETSATPFSPGASNR2	37454.3	40713.6	36703.3
P62025	P62025	PHAR2_RAT	Phactr2	Phosphatase and actin regulator 2	1	ETSAVLER	ETSAVLER	2	ETSAVLER2	12886.8	10890.5	18911.7
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	ETSFGSLR	ETSFGSLR	2	ETSFGSLR2	9220.2	13401.2	15156.7
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	ETSFNQAYGR	ETSFNQAYGR	2	ETSFNQAYGR2	15193.7	19564.7	12066.2
P16232	P16232	DHI1_RAT	Hsd11b1	11-beta-hydroxysteroid dehydrogenase 1	1	ETSGIILSQAAPK	ETSGIILSQAAPK	2	ETSGIILSQAAPK2	6918.27	6898.99	4344.83
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	ETSGSQPPELCSGVSR	ETSGSQPPELC(UniMod:4)SGVSR	2	ETSGSQPPELC(UniMod:4)SGVSR2	44160.5	59802.7	69033.2
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	ETSHSVLQLENVAQALDAVR	ETSHSVLQLENVAQALDAVR	3	ETSHSVLQLENVAQALDAVR3	214808	202084	219886
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	ETSIGILSAAVSR	ETSIGILSAAVSR	2	ETSIGILSAAVSR2	43800.1	35975.7	35410.9
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	ETSIGILSAAVSR	ETSIGILSAAVSR	3	ETSIGILSAAVSR3		2839.55	3590.73
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	ETSLDISSK	ETSLDISSK	2	ETSLDISSK2	7757	10536.1	16901.2
P18297	D3ZT59;P18297	SPRE_RAT	Spr	Sepiapterin reductase	0	ETSMDPELR	ETSMDPELR	2	ETSMDPELR2	25176.1	19900.5	20822.5
P61621	P61621	S61A1_RAT	Sec61a1	Protein transport protein Sec61 subunit alpha isoform 1	1	ETSMVHELNR	ETSMVHELNR	2	ETSMVHELNR2	6231.22	2932.38	6550.2
P61621	P61621	S61A1_RAT	Sec61a1	Protein transport protein Sec61 subunit alpha isoform 1	1	ETSMVHELNR	ETSMVHELNR	3	ETSMVHELNR3	150999	153124	156785
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	ETSPPDYR	ETSPPDYR	2	ETSPPDYR2	72673.8	87192.3	78560.2
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	ETSQQLMIELNSVK	ETSQQLMIELNSVK	2	ETSQQLMIELNSVK2	9905.12	5563.42	7702.19
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	ETSSLESFVR	ETSSLESFVR	2	ETSSLESFVR2	25332.5	29001	35957.3
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	ETSVEVEWDPLDIAFETWEIIFR	ETSVEVEWDPLDIAFETWEIIFR	3	ETSVEVEWDPLDIAFETWEIIFR3		2956.36	4805.97
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	ETSYEEALANQR	ETSYEEALANQR	2	ETSYEEALANQR2	13539.6	6471.59	9763.62
B0BN30	B0BN30	B0BN30_RAT	Mtch1	Mitochondrial carrier 1	1	ETSYEMMMQCVSR	ETSYEMMMQC(UniMod:4)VSR	2	ETSYEMMMQC(UniMod:4)VSR2	1478.92	2471.02	2790.3
Q6AXV4	Q6AXV4	SAM50_RAT	Samm50	Sorting and assembly machinery component 50 homolog	1	ETSYGLSFFKPQPGNFEK	ETSYGLSFFKPQPGNFEK	3	ETSYGLSFFKPQPGNFEK3	72082.6	59909.2	61516
P08650	P08650	CO5_RAT	C5	Complement C5	1	ETSYVNPIIK	ETSYVNPIIK	2	ETSYVNPIIK2	330196	306066	250453
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	ETTAGVFHWGSSGPLCVSPK	ETTAGVFHWGSSGPLC(UniMod:4)VSPK	3	ETTAGVFHWGSSGPLC(UniMod:4)VSPK3	516097	561109	562417
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	ETTDTDTADQVIASFK	ETTDTDTADQVIASFK	2	ETTDTDTADQVIASFK2	186795	206013	195781
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	ETTDTDTADQVIASFK	ETTDTDTADQVIASFK	3	ETTDTDTADQVIASFK3	72845.9	95604.8	82903.5
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	ETTDTEQTPGQEVVLSPGSFMSVTFR	ETTDTEQTPGQEVVLSPGSFMSVTFR	3	ETTDTEQTPGQEVVLSPGSFMSVTFR3	158911	160028	183795
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	ETTEESVKETER	ETTEESVKETER	2	ETTEESVKETER2	6129.64	2094.17	1850.17
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	ETTEESVKETER	ETTEESVKETER	3	ETTEESVKETER3	27100	27995.5	25839.4
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ETTESIFSR	ETTESIFSR	2	ETTESIFSR2	28366.8	30741	25041.1
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	ETTFPDQVQDLVFNLHMILSDTVK	ETTFPDQVQDLVFNLHMILSDTVK	3	ETTFPDQVQDLVFNLHMILSDTVK3		8283	3222.34
F1M3G7	F1M3G7	AKP13_RAT	Akap13	A-kinase anchor protein 13	1	ETTGHCSVETEAPEK	ETTGHC(UniMod:4)SVETEAPEK	3	ETTGHC(UniMod:4)SVETEAPEK3	5158.62	6470.91	7325.99
F1LQ09	F1LQ09	F1LQ09_RAT	Atl2	Atlastin GTPase 2	1	ETTGIQVWNEVFVIDRPNGTK	ETTGIQVWNEVFVIDRPNGTK	3	ETTGIQVWNEVFVIDRPNGTK3	7018.43	5818.46	7114.94
B1WBS4	B1WBS4	B1WBS4_RAT	Vps26b	VPS26 retromer complex component B	1	ETTGTGPNVYHENDTIAK	ETTGTGPNVYHENDTIAK	3	ETTGTGPNVYHENDTIAK3	14850	13673	19104.4
A0A8I5ZVI9	A0A8I5ZVI9	A0A8I5ZVI9_RAT	Ranbp3	RAN binding protein 3	1	ETTHAQSGSESSSQEAVPK	ETTHAQSGSESSSQEAVPK	3	ETTHAQSGSESSSQEAVPK3	7489.5	8667.45	6019.96
D4A7Z0	D4A7Z0	D4A7Z0_RAT	Wdtc1	WD and tetratricopeptide repeats 1	1	ETTNLVR	ETTNLVR	2	ETTNLVR2	6837.84	5327.95	3801.31
Q3MHS7	Q3MHS7	Q3MHS7_RAT	Gmds	GDP-mannose 4,6-dehydratase	1	ETTPFYPR	ETTPFYPR	2	ETTPFYPR2	16191.3	26112.2	14478.5
A0A8I6G6W8	A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	ETTQVVQETEPESGSQPR	ETTQVVQETEPESGSQPR	3	ETTQVVQETEPESGSQPR3	16254.1	16862.9	16143.8
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	ETTVETK	ETTVETK	1	ETTVETK1			20849.9
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	ETTVETK	ETTVETK	2	ETTVETK2			313570
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	ETTVFYSITGPGADK	ETTVFYSITGPGADK	2	ETTVFYSITGPGADK2			2913.66
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	ETTVFYSITGPGADKPPVGVFIIER	ETTVFYSITGPGADKPPVGVFIIER	3	ETTVFYSITGPGADKPPVGVFIIER3	48534.6	53426.7	59876.8
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	ETTVLVAQDGNIK	ETTVLVAQDGNIK	2	ETTVLVAQDGNIK2	9779.57	5272.15	2964.81
P09650	P09650	MCPT1_RAT	Mcpt1	Mast cell protease 1	1	ETTVTLGVHDVSK	ETTVTLGVHDVSK	2	ETTVTLGVHDVSK2	4880.01		
P09650	P09650	MCPT1_RAT	Mcpt1	Mast cell protease 1	1	ETTVTLGVHDVSK	ETTVTLGVHDVSK	3	ETTVTLGVHDVSK3	19709.5	12295.1	4731.11
Q63060	Q63060;A0A8I6AQ25	GLPK_RAT	Gk	Glycerol kinase	0	ETTVVWDK	ETTVVWDK	2	ETTVVWDK2	52326.2	42287	48070.4
P63036	P63036	DNJA1_RAT	Dnaja1	DnaJ homolog subfamily A member 1	1	ETTYYDVLGVKPNATQEELK	ETTYYDVLGVKPNATQEELK	3	ETTYYDVLGVKPNATQEELK3	7724.39	5469.26	9142.46
P63036	P63036	DNJA1_RAT	Dnaja1	DnaJ homolog subfamily A member 1	1	ETTYYDVLGVKPNATQEELKK	ETTYYDVLGVKPNATQEELKK	3	ETTYYDVLGVKPNATQEELKK3	14002.3	7736.55	9294.44
P63036	P63036	DNJA1_RAT	Dnaja1	DnaJ homolog subfamily A member 1	1	ETTYYDVLGVKPNATQEELKK	ETTYYDVLGVKPNATQEELKK	4	ETTYYDVLGVKPNATQEELKK4	36742.2	43972.1	35412.3
Q7TP01	Q7TP01	Q7TP01_RAT	Saal1	Bq135360	1	ETVAQGLK	ETVAQGLK	2	ETVAQGLK2	8213.9	13428.7	11606
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	ETVAYLQAHALTAEGIFR	ETVAYLQAHALTAEGIFR	3	ETVAYLQAHALTAEGIFR3	62739.7	38313.4	81146.2
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	ETVDCFCAHFEEQLK	ETVDC(UniMod:4)FC(UniMod:4)AHFEEQLK	3	ETVDC(UniMod:4)FC(UniMod:4)AHFEEQLK3	9054.06		18681.2
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	ETVDQVEELR	ETVDQVEELR	2	ETVDQVEELR2	25588.9	19704.9	22190.8
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	ETVDQVEELRR	ETVDQVEELRR	3	ETVDQVEELRR3	157390	210894	144572
Q76GL9	Q76GL9	Q76GL9_RAT	Slc1a4	Amino acid transporter	1	ETVDSFLDLLR	ETVDSFLDLLR	2	ETVDSFLDLLR2	7251.53	4779.28	7168.37
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	ETVDSVEK	ETVDSVEK	2	ETVDSVEK2	131760	150023	150527
M0RC54	M0RC54	M0RC54_RAT	Bod1l1	Biorientation of chromosomes in cell division 1-like 1	1	ETVEDTTISTGLVR	ETVEDTTISTGLVR	2	ETVEDTTISTGLVR2	1971.27	2715.99	
F7FNG5	F7FNG5	F7FNG5_RAT	Cul4a	Cullin 4A	1	ETVEEQVSTTER	ETVEEQVSTTER	2	ETVEEQVSTTER2	3411.21		
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	ETVEGLQDK	ETVEGLQDK	2	ETVEGLQDK2	130623	130707	122786
Q4QR85	Q4QR85	MEP50_RAT	Wdr77	Methylosome protein WDR77	1	ETVFLSCSEDSR	ETVFLSC(UniMod:4)SEDSR	2	ETVFLSC(UniMod:4)SEDSR2	41327.2	18118.7	34559.7
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	ETVGDLEAMNEMNDELQENAR	ETVGDLEAMNEMNDELQENAR	3	ETVGDLEAMNEMNDELQENAR3	32989	30555.6	41162.4
A0A1B0GWT7	A0A1B0GWT7	A0A1B0GWT7_RAT	Lamtor2	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2	1	ETVGFGMLK	ETVGFGMLK	2	ETVGFGMLK2	55790.4	57105.5	66865.6
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	ETVGQSLLQQTQMGDIWPGR	ETVGQSLLQQTQMGDIWPGR	3	ETVGQSLLQQTQMGDIWPGR3	76219	67464.4	54433.2
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	ETVGQSLLQQTQMGDIWPGRR	ETVGQSLLQQTQMGDIWPGRR	3	ETVGQSLLQQTQMGDIWPGRR3	71381.3	76715.7	75383.5
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	ETVHGLLR	ETVHGLLR	2	ETVHGLLR2	7758.8	8257.23	5744.44
B4F7E7	B4F7E7	PALS1_RAT	Pals1	Protein PALS1	1	ETVIHVK	ETVIHVK	2	ETVIHVK2	2783.12	4695.33	
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	ETVIPEQLQIAEDNLR	ETVIPEQLQIAEDNLR	2	ETVIPEQLQIAEDNLR2	10598.4	16422.4	16335.4
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	ETVIPEQLQIAEDNLR	ETVIPEQLQIAEDNLR	3	ETVIPEQLQIAEDNLR3	5387.43		5672.98
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	ETVITMSGDDHPR	ETVITMSGDDHPR	2	ETVITMSGDDHPR2	31433.3	49137.9	36918.3
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	ETVITMSGDDHPR	ETVITMSGDDHPR	3	ETVITMSGDDHPR3	270206	332732	328741
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	ETVLDQK	ETVLDQK	2	ETVLDQK2	24837.6	22041	18951.8
A0A8I5ZM48	A0A8I5ZM48	A0A8I5ZM48_RAT	ENSRNOG00000062392	Ig-like domain-containing protein	1	ETVLTQSPTTTAASPGEK	ETVLTQSPTTTAASPGEK	2	ETVLTQSPTTTAASPGEK2	68832.1	42922	56751.8
A0A8I5ZM48	A0A8I5ZM48	A0A8I5ZM48_RAT	ENSRNOG00000062392	Ig-like domain-containing protein	1	ETVLTQSPTTTAASPGEK	ETVLTQSPTTTAASPGEK	3	ETVLTQSPTTTAASPGEK3	17566.9	14059.5	14336.7
F1M1H0	F1M1H0	F1M1H0_RAT	Dera	deoxyribose-phosphate aldolase	1	ETVNATFPVAIVMLR	ETVNATFPVAIVMLR	2	ETVNATFPVAIVMLR2	28215.6	23138.2	19331.5
A0A8I6AAD8	A0A8I6AAD8	A0A8I6AAD8_RAT	Snx4	Sorting nexin 4	1	ETVNETGFQLK	ETVNETGFQLK	2	ETVNETGFQLK2	13214.4	11255.6	12667.2
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	ETVNQVAGR	ETVNQVAGR	2	ETVNQVAGR2	8958.42	9599.67	4441.44
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	ETVNVDPFSPSDQFR	ETVNVDPFSPSDQFR	2	ETVNVDPFSPSDQFR2	14891.8	20261.4	15504.2
Q9QWE9	Q9QWE9	GGT5_RAT	Ggt5	Glutathione hydrolase 5 proenzyme	1	ETVPASHDQR	ETVPASHDQR	2	ETVPASHDQR2			18828.2
Q9QWE9	Q9QWE9	GGT5_RAT	Ggt5	Glutathione hydrolase 5 proenzyme	1	ETVPASHDQR	ETVPASHDQR	3	ETVPASHDQR3			63824.4
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	ETVPEESTSNVAHLWDK	ETVPEESTSNVAHLWDK	2	ETVPEESTSNVAHLWDK2	10863.7	9125.99	9414.06
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	ETVPEESTSNVAHLWDK	ETVPEESTSNVAHLWDK	3	ETVPEESTSNVAHLWDK3	7999.97	9508.38	7094.05
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	ETVPEFGEGK	ETVPEFGEGK	2	ETVPEFGEGK2	41390.9	51092.1	39640.6
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	ETVPLLWHFLQK	ETVPLLWHFLQK	3	ETVPLLWHFLQK3	8044.54	3011.87	6508.39
A0A8I6ACK9	A0A8I6A0D0;A0A8I6ACK9	A0A8I6ACK9_RAT	Abcg3l3	ATP-binding cassette, subfamily G (WHITE), member 3-like 3	0	ETVQSGFPLR	ETVQSGFPLR	2	ETVQSGFPLR2	28997.6	24927.2	24596.1
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	ETVQTTEDQILK	ETVQTTEDQILK	2	ETVQTTEDQILK2	431742	329388	378452
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	ETVQTTEDQILKR	ETVQTTEDQILKR	2	ETVQTTEDQILKR2	32621.5	20649.9	18242.1
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	ETVQTTEDQILKR	ETVQTTEDQILKR	3	ETVQTTEDQILKR3	474121	524931	491337
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	ETVSEESNVLCLSK	ETVSEESNVLC(UniMod:4)LSK	2	ETVSEESNVLC(UniMod:4)LSK2	62956.5	66238.2	46242.9
Q07803	Q07803	EFGM_RAT	Gfm1	Elongation factor G, mitochondrial	1	ETVTAPVPFDFTHK	ETVTAPVPFDFTHK	3	ETVTAPVPFDFTHK3		9907.78	
B2GV06	B2GV06	SCOT1_RAT	Oxct1	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial	1	ETVTVLPGASFFSSDESFAMIR	ETVTVLPGASFFSSDESFAMIR	3	ETVTVLPGASFFSSDESFAMIR3	20482.2	11843.6	18848.1
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	ETVVEVPQVTWEDIGGLEDVK	ETVVEVPQVTWEDIGGLEDVK	3	ETVVEVPQVTWEDIGGLEDVK3	164806	158589	186798
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	ETVVEVPQVTWEDIGGLEDVKR	ETVVEVPQVTWEDIGGLEDVKR	3	ETVVEVPQVTWEDIGGLEDVKR3	229010	211775	278317
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	ETVVTSTTEPSR	ETVVTSTTEPSR	2	ETVVTSTTEPSR2	795137	762065	809828
B2RZ33	B2RZ33	B2RZ33_RAT	Nck1	Cytoplasmic protein	1	ETVYCIGQR	ETVYC(UniMod:4)IGQR	2	ETVYC(UniMod:4)IGQR2	30993.5	29413.5	22596.4
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	ETVYNLR	ETVYNLR	2	ETVYNLR2	42277.3	32575.6	33861.5
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	ETWILHSQISTIEK	ETWILHSQISTIEK	2	ETWILHSQISTIEK2	1320.23		
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	ETWILHSQISTIEK	ETWILHSQISTIEK	3	ETWILHSQISTIEK3	7262.43	12322.7	8288.33
D4A6E6	D3ZEK5;A0A8I5ZN51;D4A6E6	D4A6E6_RAT	Hs6st1	Heparan-sulfate 6-O-sulfotransferase	0	ETWLFSR	ETWLFSR	2	ETWLFSR2	9708.28		11913
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	ETWLNENQR	ETWLNENQR	2	ETWLNENQR2	68405.2	92238.4	55686.4
G3V6S0	Q9QWN8;G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	0	ETWLSENQR	ETWLSENQR	2	ETWLSENQR2	707640	893851	1.07314e+06
P20760	P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	1	ETWQQGNTFTCSVLHEGLHNHHTEK	ETWQQGNTFTC(UniMod:4)SVLHEGLHNHHTEK	4	ETWQQGNTFTC(UniMod:4)SVLHEGLHNHHTEK4	3147.98	10641.5	6422.73
P18292	P18292	THRB_RAT	F2	Prothrombin	1	ETWTTNINEIQPSVLQVVNLPIVER	ETWTTNINEIQPSVLQVVNLPIVER	3	ETWTTNINEIQPSVLQVVNLPIVER3	1.6443e+06	1.36037e+06	1.41013e+06
P18292	P18292	THRB_RAT	F2	Prothrombin	1	ETWTTNINEIQPSVLQVVNLPIVER	ETWTTNINEIQPSVLQVVNLPIVER	4	ETWTTNINEIQPSVLQVVNLPIVER4	45867.6	44622.5	40491.1
P18292	P18292	THRB_RAT	F2	Prothrombin	1	ETWTTNINEIQPSVLQVVNLPIVERPVCK	ETWTTNINEIQPSVLQVVNLPIVERPVC(UniMod:4)K	4	ETWTTNINEIQPSVLQVVNLPIVERPVC(UniMod:4)K4	26668.6	1.67326e+07	32267.7
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	ETWYLSWALDTNQEER	ETWYLSWALDTNQEER	3	ETWYLSWALDTNQEER3	4450.9	6509.58	3676.84
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	ETYETLASDMQWK	ETYETLASDMQWK	2	ETYETLASDMQWK2	15133.1	21626.5	16562.6
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	ETYGAFLHR	ETYGAFLHR	2	ETYGAFLHR2			3204.57
F7ETC0	F7ETC0	F7ETC0_RAT	Smpd1	Sphingomyelin phosphodiesterase	1	ETYGLPDAMPASWHNLVYR	ETYGLPDAMPASWHNLVYR	3	ETYGLPDAMPASWHNLVYR3	16459.9	15154	17315.2
A0A8I6AIH6	A0A8I6AIH6	A0A8I6AIH6_RAT	Suclg2	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial	1	ETYLAILMDR	ETYLAILMDR	2	ETYLAILMDR2	55307.3	39317.4	39934.4
P51146	P51146	RAB4B_RAT	Rab4b	Ras-related protein Rab-4B	1	ETYNSLAAWLTDAR	ETYNSLAAWLTDAR	2	ETYNSLAAWLTDAR2	14143.5	12751	15750.8
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	ETYPAYLPLYVAR	ETYPAYLPLYVAR	2	ETYPAYLPLYVAR2	19526.5	24644.5	19237.7
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	ETYTSLQQEVDIK	ETYTSLQQEVDIK	2	ETYTSLQQEVDIK2	4274.41	2757.94	6755.96
M0R8H7	M0R8H7	M0R8H7_RAT	Ifnar2	Interferon alpha and beta receptor subunit 2	1	ETYVPIIVVHR	ETYVPIIVVHR	2	ETYVPIIVVHR2	17898.3	11590.1	7252.66
M0R8H7	M0R8H7	M0R8H7_RAT	Ifnar2	Interferon alpha and beta receptor subunit 2	1	ETYVPIIVVHR	ETYVPIIVVHR	3	ETYVPIIVVHR3	51008.3	30134.3	29409.6
Q66H59	Q66H59	NPL_RAT	Npl	N-acetylneuraminate lyase	1	EVAAAAPALPFYYYHIPSLTGVK	EVAAAAPALPFYYYHIPSLTGVK	3	EVAAAAPALPFYYYHIPSLTGVK3	46836.2	45990.3	53647.2
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	EVAAFAQFGSDLDAATQQLLSR	EVAAFAQFGSDLDAATQQLLSR	3	EVAAFAQFGSDLDAATQQLLSR3	40089	27550.1	31512.5
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	EVAALTSQMDMLR	EVAALTSQMDMLR	2	EVAALTSQMDMLR2	128463	92146.2	91559.6
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	EVAAPDVGR	EVAAPDVGR	2	EVAAPDVGR2	103162	77598.5	103360
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	EVAAVLLHFK	EVAAVLLHFK	2	EVAAVLLHFK2	3660.37		
P30427	P30427	PLEC_RAT	Plec	Plectin	1	EVAEADEVR	EVAEADEVR	2	EVAEADEVR2	5827.74	7429.81	
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	EVAEAYEVLSDK	EVAEAYEVLSDK	2	EVAEAYEVLSDK2	348216	338326	365935
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	EVAEAYEVLSDKHK	EVAEAYEVLSDKHK	3	EVAEAYEVLSDKHK3	12546	16551	14816.6
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	EVAEAYEVLSDKHK	EVAEAYEVLSDKHK	4	EVAEAYEVLSDKHK4	5807.66	6466.18	11489.1
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	EVAEDELVAAEGLLK	EVAEDELVAAEGLLK	2	EVAEDELVAAEGLLK2	14004.6	21970.6	17613.3
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	EVAEDELVAAEGLLK	EVAEDELVAAEGLLK	3	EVAEDELVAAEGLLK3	8658.55	5013.61	6843.22
P97711	P97711	GRK6_RAT	Grk6	G protein-coupled receptor kinase 6	1	EVAEEYTDR	EVAEEYTDR	2	EVAEEYTDR2	37847.5	33929.7	37069.2
D4ACD2	D4ACD2	D4ACD2_RAT	Bach1	BTB domain and CNC homolog 1	1	EVAEHLAK	EVAEHLAK	2	EVAEHLAK2	3651.09	2787.47	
Q5U203	Q5U203	UBE2F_RAT	Ube2f	NEDD8-conjugating enzyme UBE2F	1	EVAELEANLPCTCK	EVAELEANLPC(UniMod:4)TC(UniMod:4)K	2	EVAELEANLPC(UniMod:4)TC(UniMod:4)K2	8753.99	9942.83	11112.2
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EVAELTR	EVAELTR	2	EVAELTR2	579227	577588	527199
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	EVAEQFLNIR	EVAEQFLNIR	2	EVAEQFLNIR2	256424	239862	267180
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	EVAEQFLNIR	EVAEQFLNIR	3	EVAEQFLNIR3	6008.59	7692.84	
D4A8N1	D4A8N1	D4A8N1_RAT	Dpm1	Dolichol-phosphate mannosyltransferase subunit 1	1	EVAEQLEK	EVAEQLEK	2	EVAEQLEK2	22779.5	37320.1	27998.9
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	EVAFDVEIPK	EVAFDVEIPK	2	EVAFDVEIPK2	759943	872896	605447
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	EVAFDVEIPK	EVAFDVEIPK	3	EVAFDVEIPK3	27357.3	27379.5	30903.3
Q5XI39	A0A8I6A215;Q5XI39	Q5XI39_RAT	Cryzl1	Crystallin zeta like 1	0	EVAGIVLDVGK	EVAGIVLDVGK	2	EVAGIVLDVGK2	5278.27	5537.69	2857.71
Q5XI39	A0A8I6A215;Q5XI39	Q5XI39_RAT	Cryzl1	Crystallin zeta like 1	0	EVAGIVLDVGKK	EVAGIVLDVGKK	3	EVAGIVLDVGKK3	4395.18	1855.27	2804.16
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	EVAGPTEMCDQR	EVAGPTEMC(UniMod:4)DQR	2	EVAGPTEMC(UniMod:4)DQR2	132420	127425	119932
A0A8I6A8L3	A0A8I6A8L3	A0A8I6A8L3_RAT	Dnpep	Aspartyl aminopeptidase	1	EVAGQVGVPLQDLMVR	EVAGQVGVPLQDLMVR	2	EVAGQVGVPLQDLMVR2	45386.6	51937	56042.5
A0A8I6A8L3	A0A8I6A8L3	A0A8I6A8L3_RAT	Dnpep	Aspartyl aminopeptidase	1	EVAGQVGVPLQDLMVR	EVAGQVGVPLQDLMVR	3	EVAGQVGVPLQDLMVR3	6662.82	8377.57	5978.67
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	EVALLAEMDK	EVALLAEMDK	2	EVALLAEMDK2	34117.1	26689.9	30988
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	EVALLAEMDKVK	EVALLAEMDKVK	2	EVALLAEMDKVK2		1604.57	2985.34
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	EVALLAEMDKVK	EVALLAEMDKVK	3	EVALLAEMDKVK3	26645.8	25255.4	22356.2
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	EVALNTIIFMGR	EVALNTIIFMGR	2	EVALNTIIFMGR2	317023	243524	232857
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	EVALNTIIFMGR	EVALNTIIFMGR	3	EVALNTIIFMGR3	11680.1	11523.4	11426.8
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	EVALSVGIPENSIVFMADR	EVALSVGIPENSIVFMADR	3	EVALSVGIPENSIVFMADR3	206744	187728	150192
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	EVALSVGIPENSIVFMADRGECVPGDR	EVALSVGIPENSIVFMADRGEC(UniMod:4)VPGDR	3	EVALSVGIPENSIVFMADRGEC(UniMod:4)VPGDR3	89328.2	110380	104017
A0A8I6GJ51	A0A8I6GJ51	A0A8I6GJ51_RAT	Ccdc85a	Coiled-coil domain containing 85A	1	EVALYLQK	EVALYLQK	2	EVALYLQK2	5936.69	6800.75	7073.49
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	EVANSTANLVK	EVANSTANLVK	2	EVANSTANLVK2	2.8724e+06	2.79795e+06	2.95086e+06
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	EVANVCNQSLMK	EVANVC(UniMod:4)NQSLMK	2	EVANVC(UniMod:4)NQSLMK2	35168.9	30861.1	22870.1
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	EVAPPAVLENIHSNCHGPISMDFAISK	EVAPPAVLENIHSNC(UniMod:4)HGPISMDFAISK	4	EVAPPAVLENIHSNC(UniMod:4)HGPISMDFAISK4	5551.99	5664.52	7476.21
F1M3G7	F1M3G7	AKP13_RAT	Akap13	A-kinase anchor protein 13	1	EVAPQSSPLMK	EVAPQSSPLMK	2	EVAPQSSPLMK2	15339.9	15007.8	23267.4
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	EVAQKQYEK	EVAQKQYEK	2	EVAQKQYEK2			5944.42
A0A8I6AAW1	A0A8I6AAW1	A0A8I6AAW1_RAT	Tars3	threonine--tRNA ligase	1	EVAQLQAENR	EVAQLQAENR	2	EVAQLQAENR2	1698.33	1750.78	6477.93
D3ZKG1	D3ZKG1	D3ZKG1_RAT	Mmut	Methylmalonyl-CoA mutase, mitochondrial	1	EVAQQAVDADVHAVGVSTLAAGHK	EVAQQAVDADVHAVGVSTLAAGHK	4	EVAQQAVDADVHAVGVSTLAAGHK4	2505.87		3223.87
A0A8I6APP3	A0A8I6APP3	A0A8I6APP3_RAT	Plekho2	Pleckstrin homology domain containing O2	1	EVASAASDGLSR	EVASAASDGLSR	2	EVASAASDGLSR2	307335	291359	273914
P35738	P35738	ODBB_RAT	Bckdhb	2-oxoisovalerate dehydrogenase subunit beta, mitochondrial	1	EVASMAQEK	EVASMAQEK	2	EVASMAQEK2	15621.4	15916.7	19666.3
A0A0G2KAU4	A0A0G2KAU4	A0A0G2KAU4_RAT	Rasgrp3	RAS guanyl releasing protein 3	1	EVASQLGYEK	EVASQLGYEK	2	EVASQLGYEK2	10793.7	11453.7	16979.3
Q9EPF2	Q9EPF2	MUC18_RAT	Mcam	Cell surface glycoprotein MUC18	1	EVATCVGR	EVATC(UniMod:4)VGR	2	EVATC(UniMod:4)VGR2	32343.4	13468.3	24000
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	EVATDGLLQGNPR	EVATDGLLQGNPR	2	EVATDGLLQGNPR2	16026	10130.3	9755.31
Q6IFU8	Q6IFV1;Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	0	EVATNSELVQSGK	EVATNSELVQSGK	2	EVATNSELVQSGK2	252518	189068	203636
Q63100	Q63100	DC1I1_RAT	Dync1i1	Cytoplasmic dynein 1 intermediate chain 1	1	EVAVGDSEGR	EVAVGDSEGR	2	EVAVGDSEGR2	18919.6	29112.5	24224.6
Q5FWS5	Q5FWS5	Q5FWS5_RAT	Loxl1	Lysyl oxidase homolog	1	EVAVGDSNGMAR	EVAVGDSNGMAR	2	EVAVGDSNGMAR2	91935.1	79932.6	88698.9
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	EVAVVLMDTQGAFDSQSTVK	EVAVVLMDTQGAFDSQSTVK	3	EVAVVLMDTQGAFDSQSTVK3	9725.57	7412.51	3272.23
P07872	P07872	ACOX1_RAT	Acox1	Peroxisomal acyl-coenzyme A oxidase 1	1	EVAWNLTSVDLVR	EVAWNLTSVDLVR	2	EVAWNLTSVDLVR2	9825.55	15654.1	13006.6
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	EVCDEVK	EVC(UniMod:4)DEVK	2	EVC(UniMod:4)DEVK2	57640.6	36756.7	41818.2
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	EVCDHQAEQLSR	EVC(UniMod:4)DHQAEQLSR	2	EVC(UniMod:4)DHQAEQLSR2	4463.64	2304	2424.61
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	EVCDHQAEQLSR	EVC(UniMod:4)DHQAEQLSR	3	EVC(UniMod:4)DHQAEQLSR3	22198.5		
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	EVCDPDIGGQILMCPQCDR	EVC(UniMod:4)DPDIGGQILMC(UniMod:4)PQC(UniMod:4)DR	3	EVC(UniMod:4)DPDIGGQILMC(UniMod:4)PQC(UniMod:4)DR3	198685	211816	199107
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	EVCFACVDGK	EVC(UniMod:4)FAC(UniMod:4)VDGK	2	EVC(UniMod:4)FAC(UniMod:4)VDGK2	366644	331909	337427
A0A8I6A182	A0A8I6A182	A0A8I6A182_RAT	Pitpnc1	Phosphatidylinositol transfer protein, cytoplasmic 1	1	EVCFIDIACDEIPER	EVC(UniMod:4)FIDIAC(UniMod:4)DEIPER	2	EVC(UniMod:4)FIDIAC(UniMod:4)DEIPER2	29817.7	31563.3	32505.8
A0A8I6A182	A0A8I6A182	A0A8I6A182_RAT	Pitpnc1	Phosphatidylinositol transfer protein, cytoplasmic 1	1	EVCFIDIACDEIPER	EVC(UniMod:4)FIDIAC(UniMod:4)DEIPER	3	EVC(UniMod:4)FIDIAC(UniMod:4)DEIPER3	10792.2	6574.64	8628.61
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	EVCFTIENK	EVC(UniMod:4)FTIENK	2	EVC(UniMod:4)FTIENK2	15180.6	13142.8	27521.1
D3ZZ95;F1M706	F1M706;D3ZZ95	D3ZZ95_RAT;F1M706_RAT	LOC100360439;LOC100361060	60S ribosomal protein L36	0	EVCGFAPYER	EVC(UniMod:4)GFAPYER	2	EVC(UniMod:4)GFAPYER2	11015.7	10633.3	5276.13
Q99ME0	Q99ME0	Q99ME0_RAT	Ppbp	Pro-platelet basic protein	1	EVCLDPTAPMIK	EVC(UniMod:4)LDPTAPMIK	2	EVC(UniMod:4)LDPTAPMIK2	5.14201e+06	5.27705e+06	5.45699e+06
Q99ME0	Q99ME0	Q99ME0_RAT	Ppbp	Pro-platelet basic protein	1	EVCLDPTAPMIK	EVC(UniMod:4)LDPTAPMIK	3	EVC(UniMod:4)LDPTAPMIK3	52540.8	51689.3	51044.7
Q99ME0	Q99ME0	Q99ME0_RAT	Ppbp	Pro-platelet basic protein	1	EVCLDPTAPMIKK	EVC(UniMod:4)LDPTAPMIKK	2	EVC(UniMod:4)LDPTAPMIKK2	11814	14481.5	12743.7
Q99ME0	Q99ME0	Q99ME0_RAT	Ppbp	Pro-platelet basic protein	1	EVCLDPTAPMIKK	EVC(UniMod:4)LDPTAPMIKK	3	EVC(UniMod:4)LDPTAPMIKK3	37859.9	76290.9	97610.9
Q3MQ06	Q3MQ06	ATG5_RAT	Atg5	Autophagy protein 5	1	EVCPSAVAPEDGEK	EVC(UniMod:4)PSAVAPEDGEK	2	EVC(UniMod:4)PSAVAPEDGEK2	9428.5	6457.21	
Q3MQ06	Q3MQ06	ATG5_RAT	Atg5	Autophagy protein 5	1	EVCPSAVAPEDGEKK	EVC(UniMod:4)PSAVAPEDGEKK	3	EVC(UniMod:4)PSAVAPEDGEKK3	15075.7	15537.7	6754.7
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	EVCSEQAETGPCR	EVC(UniMod:4)SEQAETGPC(UniMod:4)R	2	EVC(UniMod:4)SEQAETGPC(UniMod:4)R2	45550.6	54375.9	54362.9
Q8CGS4	Q8CGS4	CHMP3_RAT	Chmp3	Charged multivesicular body protein 3	1	EVCVVLAK	EVC(UniMod:4)VVLAK	1	EVC(UniMod:4)VVLAK1	2365.77	3234.59	1995.88
Q8CGS4	Q8CGS4	CHMP3_RAT	Chmp3	Charged multivesicular body protein 3	1	EVCVVLAK	EVC(UniMod:4)VVLAK	2	EVC(UniMod:4)VVLAK2	253649	226336	152422
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	EVDDFFEQEK	EVDDFFEQEK	2	EVDDFFEQEK2	83799.4	92962.8	111939
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EVDDLEQWIAER	EVDDLEQWIAER	2	EVDDLEQWIAER2	474445	503117	507989
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EVDDLEQWIAER	EVDDLEQWIAER	3	EVDDLEQWIAER3	39856	35517	54052.7
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	EVDECSRPNR	EVDEC(UniMod:4)SRPNR	3	EVDEC(UniMod:4)SRPNR3			76189
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	EVDEEDAALYR	EVDEEDAALYR	2	EVDEEDAALYR2	6584.52	2509.89	7512.79
Q9Z1W6	Q9Z1W6	LYRIC_RAT	Mtdh	Protein LYRIC	1	EVDEGAWETK	EVDEGAWETK	2	EVDEGAWETK2	11399.4	19955.7	19034.9
Q99PD4	Q99PD4	ARC1A_RAT	Arpc1a	Actin-related protein 2/3 complex subunit 1A	1	EVDEKPASTPWGSK	EVDEKPASTPWGSK	2	EVDEKPASTPWGSK2	12219.8	7697.16	7634.93
Q99PD4	Q99PD4	ARC1A_RAT	Arpc1a	Actin-related protein 2/3 complex subunit 1A	1	EVDEKPASTPWGSK	EVDEKPASTPWGSK	3	EVDEKPASTPWGSK3	142471	143809	146613
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	EVDELSQSFHTTQDGAQLK	EVDELSQSFHTTQDGAQLK	3	EVDELSQSFHTTQDGAQLK3	36355.3	41633.1	19153.4
Q4QQV0	Q4QQV0	Q4QQV0_RAT	Tubb6	Tubulin beta chain	1	EVDEQMLAIQNK	EVDEQMLAIQNK	2	EVDEQMLAIQNK2	51584.2	58088.3	58246.8
Q4QQV0	Q4QQV0	Q4QQV0_RAT	Tubb6	Tubulin beta chain	1	EVDEQMLAIQNK	EVDEQMLAIQNK	3	EVDEQMLAIQNK3	2337.38	5314.65	
Q4QRB4	Q4QRB4	TBB3_RAT	Tubb3	Tubulin beta-3 chain	1	EVDEQMLAIQSK	EVDEQMLAIQSK	2	EVDEQMLAIQSK2	2684.98	2111.86	2349.49
P85108	P69897;Q6P9T8;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	EVDEQMLNVQNK	EVDEQMLNVQNK	2	EVDEQMLNVQNK2	7.66104e+06	7.36542e+06	7.3553e+06
P85108	P69897;Q6P9T8;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	EVDEQMLNVQNK	EVDEQMLNVQNK	3	EVDEQMLNVQNK3	701364	716543	836539
B4F7C2	B4F7C2	B4F7C2_RAT	Tubb4a	Tubulin beta chain	1	EVDEQMLSVQSK	EVDEQMLSVQSK	2	EVDEQMLSVQSK2	15277.4	18471.8	20510.3
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	EVDGLDVSK	EVDGLDVSK	1	EVDGLDVSK1		1758.27	2744.63
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	EVDGLDVSK	EVDGLDVSK	2	EVDGLDVSK2	342613	416907	364190
D4A2W1	D4A2W1	D4A2W1_RAT	Enpp4	Ectonucleotide pyrophosphatase/phosphodiesterase 4	1	EVDGLIGDLVQK	EVDGLIGDLVQK	2	EVDGLIGDLVQK2	27241.6	31184.9	29835
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	EVDGLLTSDPMGSPVSSK	EVDGLLTSDPMGSPVSSK	2	EVDGLLTSDPMGSPVSSK2	18406.7	10342.7	16288.9
Q6P7D4	Q6P7D4	CP20A_RAT	Cyp20a1	Cytochrome P450 20A1	1	EVDHVLGK	EVDHVLGK	2	EVDHVLGK2	6474.25	8075.84	1652.88
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	EVDIGIPDATGR	EVDIGIPDATGR	2	EVDIGIPDATGR2	2.74714e+06	2.82272e+06	3.07532e+06
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	EVDIGIPDATGRLEILQIHTK	EVDIGIPDATGRLEILQIHTK	3	EVDIGIPDATGRLEILQIHTK3	18390.1	41164.6	27486.4
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	EVDIGIPDATGRLEILQIHTK	EVDIGIPDATGRLEILQIHTK	4	EVDIGIPDATGRLEILQIHTK4	16529.7	38125.3	46320
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	EVDILISTALIPGK	EVDILISTALIPGK	2	EVDILISTALIPGK2	45300.3	44137.8	43278.9
D3ZZJ7	D3ZZJ7	D3ZZJ7_RAT	Dcp1b	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	EVDILQMLTK	EVDILQMLTK	2	EVDILQMLTK2	12378.1	8599.6	12873.2
Q63009	Q63009;A0A0G2K9I8;F1LWG2	ANM1_RAT	Prmt1	Protein arginine N-methyltransferase 1	0	EVDIYTVK	EVDIYTVK	2	EVDIYTVK2	50933.5	59853.1	36765.9
D4A651	D4A651	D4A651_RAT	Pms1	PMS1 homolog 1, mismatch repair system component	1	EVDLEEK	EVDLEEK	1	EVDLEEK1	54632.9	48502.4	54207.4
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	EVDLFMEK	EVDLFMEK	2	EVDLFMEK2	201653	207662	227600
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	EVDNFVDK	EVDNFVDK	2	EVDNFVDK2	71241.9	38873.7	42671.1
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	EVDNFVDKLK	EVDNFVDKLK	2	EVDNFVDKLK2		2724.21	3864.12
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	EVDNFVDKLK	EVDNFVDKLK	3	EVDNFVDKLK3	15378.9	19781.4	22293.9
P39052	P39052;Q08877	DYN2_RAT	Dnm2	Dynamin-2	0	EVDPQGLR	EVDPQGLR	2	EVDPQGLR2	278692	261036	262906
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	EVDQQLLSIQTR	EVDQQLLSIQTR	2	EVDQQLLSIQTR2	203961	236900	155941
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	EVDQQLLSIQTR	EVDQQLLSIQTR	3	EVDQQLLSIQTR3	3.10936e+06	3.65294e+06	3.4207e+06
Q5EB77	A0A8I5ZQR4;Q5EB77	RAB18_RAT	Rab18	Ras-related protein Rab-18	0	EVDRNEGLK	EVDRNEGLK	2	EVDRNEGLK2	3140.35		6521.22
Q3MID3	Q3MID3	ARFG2_RAT	Arfgap2	ADP-ribosylation factor GTPase-activating protein 2	1	EVDSEYEAR	EVDSEYEAR	2	EVDSEYEAR2	5970.72	8419.75	9511.51
P30121	P30121	TIMP2_RAT	Timp2	Metalloproteinase inhibitor 2	1	EVDSGNDIYGNPIK	EVDSGNDIYGNPIK	2	EVDSGNDIYGNPIK2	10276.6	2623.56	10770.2
P30121	P30121	TIMP2_RAT	Timp2	Metalloproteinase inhibitor 2	1	EVDSGNDIYGNPIKR	EVDSGNDIYGNPIKR	3	EVDSGNDIYGNPIKR3	23208.7	21721.3	13005.6
Q4KM31	Q4KM31	LIMD2_RAT	Limd2	LIM domain-containing protein 2	1	EVDSGTK	EVDSGTK	1	EVDSGTK1	8402.64	6318.57	18115.5
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	EVDSLGSIHSIPSVSVSTGSR	EVDSLGSIHSIPSVSVSTGSR	3	EVDSLGSIHSIPSVSVSTGSR3	23808.8	25402.6	38601
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	EVDYDSDMPR	EVDYDSDMPR	2	EVDYDSDMPR2	31813.8	30196.4	34926
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	EVDYDSDMPRK	EVDYDSDMPRK	3	EVDYDSDMPRK3	23070.6	19037	28587.2
B0BNI5	B0BNI5	OLFL3_RAT	Olfml3	Olfactomedin-like protein 3	1	EVDYLETQNPALPCVELDEK	EVDYLETQNPALPC(UniMod:4)VELDEK	3	EVDYLETQNPALPC(UniMod:4)VELDEK3	13055.3	15861.3	13674.9
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	EVDYLTEEK	EVDYLTEEK	2	EVDYLTEEK2	12613.2	3401.43	7346.74
Q5XIM5	Q5XIM5	CDV3_RAT	Cdv3	Protein CDV3 homolog	1	EVDYSGLR	EVDYSGLR	2	EVDYSGLR2	42224.6	33006.1	37415.4
Q4G086	Q4G086;A0A8I5ZKY4	Q4G086_RAT	Bnip3l	BCL2 interacting protein 3 like	0	EVEALKK	EVEALKK	2	EVEALKK2	4875.51		5810.35
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	EVEAVDSEYQLAR	EVEAVDSEYQLAR	2	EVEAVDSEYQLAR2	6300	4990.49	5400.8
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	EVEAVDSEYQLARPSDANRK	EVEAVDSEYQLARPSDANRK	4	EVEAVDSEYQLARPSDANRK4		3480.32	
A0A8I6AT07	A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	1	EVECYSVQR	EVEC(UniMod:4)YSVQR	2	EVEC(UniMod:4)YSVQR2			4676.5
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	EVEDCVTNR	EVEDC(UniMod:4)VTNR	2	EVEDC(UniMod:4)VTNR2	46806	45083.7	44670
Q6AXX6	Q6AXX6	PXL2A_RAT	Prxl2a	Peroxiredoxin-like 2A	1	EVEDFQPYFK	EVEDFQPYFK	2	EVEDFQPYFK2	45740.5	45966.1	67715
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	EVEEDEYK	EVEEDEYK	2	EVEEDEYK2	2.12186e+06	2.52226e+06	2.59708e+06
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	EVEEELAASGGQSPTGEQIPQFQQR	EVEEELAASGGQSPTGEQIPQFQQR	3	EVEEELAASGGQSPTGEQIPQFQQR3	36819.4	36146.4	36009.5
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	EVEEEPGLR	EVEEEPGLR	2	EVEEEPGLR2	1.3025e+06	1.41036e+06	1.27252e+06
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	EVEELEQLTQQLMQDMEHPQR	EVEELEQLTQQLMQDMEHPQR	3	EVEELEQLTQQLMQDMEHPQR3	214573	178045	187238
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	EVEELEQLTQQLMQDMEHPQR	EVEELEQLTQQLMQDMEHPQR	4	EVEELEQLTQQLMQDMEHPQR4	57980.6	36592.4	33386.7
B1H219	B1H219	B1H219_RAT	Dkk3	Dickkopf WNT signaling pathway inhibitor 3	1	EVEELMEDTQHK	EVEELMEDTQHK	2	EVEELMEDTQHK2	100560	99244.3	80710.4
B1H219	B1H219	B1H219_RAT	Dkk3	Dickkopf WNT signaling pathway inhibitor 3	1	EVEELMEDTQHK	EVEELMEDTQHK	3	EVEELMEDTQHK3	347116	401049	410114
Q66H15	Q66H15	RMD3_RAT	Rmdn3	Regulator of microtubule dynamics protein 3	1	EVEELQR	EVEELQR	2	EVEELQR2	37801.6	19835.6	32058.8
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	EVEENGIVLDPLK	EVEENGIVLDPLK	2	EVEENGIVLDPLK2	15384.9	11107.3	15676.5
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	EVEENWSK	EVEENWSK	2	EVEENWSK2	43742.8	47019.3	49938.8
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	EVEEQLIR	EVEEQLIR	2	EVEEQLIR2	60682.2	66258.9	64244.7
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	EVEERPAPTPWGSK	EVEERPAPTPWGSK	2	EVEERPAPTPWGSK2	11870.8	9851.38	5464.18
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	EVEERPAPTPWGSK	EVEERPAPTPWGSK	3	EVEERPAPTPWGSK3	206184	228739	240727
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	EVEERPDK	EVEERPDK	2	EVEERPDK2			4275.68
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	EVEERPDKDFAEK	EVEERPDKDFAEK	3	EVEERPDKDFAEK3	42800	44612.9	46436.9
P63036	P63036	DNJA1_RAT	Dnaja1	DnaJ homolog subfamily A member 1	1	EVEETDEMDQVELVDFDPNQER	EVEETDEMDQVELVDFDPNQER	3	EVEETDEMDQVELVDFDPNQER3	9163.68	5764.68	12413.9
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	EVEGLKDLLLGPCVDLPLTAR	EVEGLKDLLLGPC(UniMod:4)VDLPLTAR	3	EVEGLKDLLLGPC(UniMod:4)VDLPLTAR3	13562.5	11729	11810.5
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	EVEGQEEELK	EVEGQEEELK	2	EVEGQEEELK2	121354	101443	125443
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	EVEGQEEELKQR	EVEGQEEELKQR	2	EVEGQEEELKQR2	2574.87	2434.31	7632.75
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	EVEGQEEELKQR	EVEGQEEELKQR	3	EVEGQEEELKQR3	73979.4	85131.8	72433.2
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	EVEHCTCPPGYR	EVEHC(UniMod:4)TC(UniMod:4)PPGYR	2	EVEHC(UniMod:4)TC(UniMod:4)PPGYR2	8520.12	8698.38	9593.15
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	EVEHCTCPPGYR	EVEHC(UniMod:4)TC(UniMod:4)PPGYR	3	EVEHC(UniMod:4)TC(UniMod:4)PPGYR3	148674	139506	155334
Q9Z0W7	Q9Z0W7	CLIC4_RAT	Clic4	Chloride intracellular channel protein 4	1	EVEIAYSDVAK	EVEIAYSDVAK	2	EVEIAYSDVAK2	27745.4	24167.8	15789.3
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	EVELPLSNFR	EVELPLSNFR	2	EVELPLSNFR2	35163.9	30466.4	
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	EVELTEINRR	EVELTEINRR	3	EVELTEINRR3	15525.9	15042.4	15769
P97536	P97536;Q9R0L4	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	0	EVEMGPFK	EVEMGPFK	2	EVEMGPFK2	406791	478715	384499
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	EVENLILENTQLLETK	EVENLILENTQLLETK	2	EVENLILENTQLLETK2	28123.5	24351.4	23507.2
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	EVENLILENTQLLETK	EVENLILENTQLLETK	3	EVENLILENTQLLETK3	20034.3	14978.1	15595.2
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	EVENSEDPK	EVENSEDPK	2	EVENSEDPK2			31839.8
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	EVENSEDPKFR	EVENSEDPKFR	2	EVENSEDPKFR2	6668.73	6564.79	7222.61
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	EVENSEDPKFR	EVENSEDPKFR	3	EVENSEDPKFR3	55954.7	47395.1	51934.4
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	EVEPEPAEEK	EVEPEPAEEK	2	EVEPEPAEEK2	243964	263069	249701
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	EVEPEPAEEKDVEADEEDSR	EVEPEPAEEKDVEADEEDSR	3	EVEPEPAEEKDVEADEEDSR3	40265	43587.8	41645.7
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	EVEPEPAEEKDVEADEEDSRK	EVEPEPAEEKDVEADEEDSRK	3	EVEPEPAEEKDVEADEEDSRK3	13948.8	17541.7	13509.8
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	EVEPEPAEEKDVEADEEDSRK	EVEPEPAEEKDVEADEEDSRK	4	EVEPEPAEEKDVEADEEDSRK4	24873.9	40014.7	39666.9
P21670	P21670	PSA4_RAT	Psma4	Proteasome subunit alpha type-4	1	EVEQLIK	EVEQLIK	1	EVEQLIK1	28112.8	27803.3	16498.9
P21670	P21670	PSA4_RAT	Psma4	Proteasome subunit alpha type-4	1	EVEQLIK	EVEQLIK	2	EVEQLIK2	1.52008e+06	1.4122e+06	1.59548e+06
P21670	P21670	PSA4_RAT	Psma4	Proteasome subunit alpha type-4	1	EVEQLIKK	EVEQLIKK	2	EVEQLIKK2	7333.26	6559.3	10020.2
P97612	P97612	FAAH1_RAT	Faah	Fatty-acid amide hydrolase 1	1	EVEQLMTPQK	EVEQLMTPQK	2	EVEQLMTPQK2	18520.5	7366.71	5922.65
A0A8I6A9R8	A0A8I6A9R8	A0A8I6A9R8_RAT	Cope	Coatomer subunit epsilon	1	EVERDVFLYR	EVERDVFLYR	3	EVERDVFLYR3	16808.5	21312.3	29721.8
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	EVESFQQLLNAR	EVESFQQLLNAR	2	EVESFQQLLNAR2	7553.16	12912.9	11269.5
Q68FY0	Q68FY0	QCR1_RAT	Uqcrc1	Cytochrome b-c1 complex subunit 1, mitochondrial	1	EVESIGAHLNAYSTR	EVESIGAHLNAYSTR	2	EVESIGAHLNAYSTR2	7471.11	10491.3	11539.8
Q68FY0	Q68FY0	QCR1_RAT	Uqcrc1	Cytochrome b-c1 complex subunit 1, mitochondrial	1	EVESIGAHLNAYSTR	EVESIGAHLNAYSTR	3	EVESIGAHLNAYSTR3	128890	127150	164097
A0A8I5ZS67	A0A8I5ZS67	A0A8I5ZS67_RAT	Gigyf2	GRB10 interacting GYF protein 2	1	EVESPYEVHDYTR	EVESPYEVHDYTR	3	EVESPYEVHDYTR3	5358.95	4229.09	8325
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	EVESTSFAR	EVESTSFAR	2	EVESTSFAR2	981258	781923	790815
Q6AXM8	Q6AXM8	PON2_RAT	Pon2	Serum paraoxonase/arylesterase 2	1	EVESVDLPNCR	EVESVDLPNC(UniMod:4)R	2	EVESVDLPNC(UniMod:4)R2	59901.9	66740	56284.1
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	EVETHANNSSIELEK	EVETHANNSSIELEK	2	EVETHANNSSIELEK2	4378.74	3653.79	2727.54
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	EVETHANNSSIELEK	EVETHANNSSIELEK	3	EVETHANNSSIELEK3	92015.6	80230.5	91461.1
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	EVETLPR	EVETLPR	2	EVETLPR2	227180	199733	226239
Q4G050	Q4G050	MKNK1_RAT	Mknk1	MAP kinase-interacting serine/threonine-protein kinase 1	1	EVETLYQCQGNR	EVETLYQC(UniMod:4)QGNR	2	EVETLYQC(UniMod:4)QGNR2	8107.03	5784.64	8756
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	EVEVEVESMDK	EVEVEVESMDK	2	EVEVEVESMDK2	42182.1	24282.2	27068.4
A0A8I5ZQA7	A0A8I5ZQA7	A0A8I5ZQA7_RAT	Serpinb6b	Serine (or cysteine) peptidase inhibitor, clade B, member 6b	1	EVEVFLPK	EVEVFLPK	2	EVEVFLPK2	5227.2	3949.11	4375.3
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	EVEVVEIIQATVIK	EVEVVEIIQATVIK	2	EVEVVEIIQATVIK2	58467.8	43277.8	62217.7
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	EVEVVEIIQATVIK	EVEVVEIIQATVIK	3	EVEVVEIIQATVIK3	29610	16977.3	40751.2
O35254	O35254	GORS1_RAT	Gorasp1	Golgi reassembly-stacking protein 1	1	EVEVVPSNMWGGQGLLGASVR	EVEVVPSNMWGGQGLLGASVR	3	EVEVVPSNMWGGQGLLGASVR3	2754.06	3739.41	4974.67
Q32PX6	Q32PX6	Q32PX6_RAT	Rhog	Ras homolog family member G	1	EVFAEAVR	EVFAEAVR	2	EVFAEAVR2	313876	306263	312738
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	EVFAHEHEEMK	EVFAHEHEEMK	3	EVFAHEHEEMK3	23732.6	16458.4	20811.7
P08649	P08649	CO4_RAT	C4	Complement C4	1	EVFAPTSIFQDDFIIPDISEPGTWK	EVFAPTSIFQDDFIIPDISEPGTWK	3	EVFAPTSIFQDDFIIPDISEPGTWK3			17924.1
P08649	P08649	CO4_RAT	C4	Complement C4	1	EVFAPTSIFQDDFIIPDISEPGTWK	EVFAPTSIFQDDFIIPDISEPGTWK	4	EVFAPTSIFQDDFIIPDISEPGTWK4			4870.16
P63329	P63329	PP2BA_RAT	Ppp3ca	Protein phosphatase 3 catalytic subunit alpha	1	EVFDNDGKPR	EVFDNDGKPR	2	EVFDNDGKPR2	30291.7	17176.3	23539.9
P63329	P63329	PP2BA_RAT	Ppp3ca	Protein phosphatase 3 catalytic subunit alpha	1	EVFDNDGKPR	EVFDNDGKPR	3	EVFDNDGKPR3	261684	239911	252967
Q6U6G5	Q6U6G5	ZC3HF_RAT	Zc3h15	Zinc finger CCCH domain-containing protein 15	1	EVFEFRPELVNDDDEEADDTR	EVFEFRPELVNDDDEEADDTR	3	EVFEFRPELVNDDDEEADDTR3	4160.31	3318.01	5342.23
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	EVFEFVGR	EVFEFVGR	2	EVFEFVGR2	146833	109696	114996
P61589	P61589	RHOA_RAT	Rhoa	Transforming protein RhoA	1	EVFEMATR	EVFEMATR	2	EVFEMATR2	1.11284e+06	964799	1.11023e+06
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	EVFENTEK	EVFENTEK	2	EVFENTEK2	62653.1	58313.1	47513
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	EVFESMNLTAYDLSVDTLDVHADR	EVFESMNLTAYDLSVDTLDVHADR	3	EVFESMNLTAYDLSVDTLDVHADR3	9220.62	6187.91	3622.88
P62747	P62747	RHOB_RAT	Rhob	Rho-related GTP-binding protein RhoB	1	EVFETATR	EVFETATR	2	EVFETATR2	103446	92421.6	106568
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	EVFGCMK	EVFGC(UniMod:4)MK	2	EVFGC(UniMod:4)MK2	36950.1	51562	41581.2
A0A8I5Y7I2	A6Y7S3;A0A8I6A7D3;A0A8I5Y7I2	A0A8I5Y7I2_RAT	Kctd12	Potassium channel tetramerization domain containing 12	0	EVFGDTLNESR	EVFGDTLNESR	2	EVFGDTLNESR2	52120.8	35178	29104.9
A0A8I5Y7I2	A0A8I6A7D3;A0A8I5Y7I2	A0A8I5Y7I2_RAT	Kctd12	Potassium channel tetramerization domain containing 12	0	EVFGDTLNESRDPDRPPER	EVFGDTLNESRDPDRPPER	3	EVFGDTLNESRDPDRPPER3	66183.4	52220.5	45780.6
A0A8I5Y7I2	A0A8I6A7D3;A0A8I5Y7I2	A0A8I5Y7I2_RAT	Kctd12	Potassium channel tetramerization domain containing 12	0	EVFGDTLNESRDPDRPPER	EVFGDTLNESRDPDRPPER	4	EVFGDTLNESRDPDRPPER4	188220	255392	209209
O35854	O35854	BCAT2_RAT	Bcat2	Branched-chain-amino-acid aminotransferase, mitochondrial	1	EVFGSGTACQVCPVHQILYEGK	EVFGSGTAC(UniMod:4)QVC(UniMod:4)PVHQILYEGK	3	EVFGSGTAC(UniMod:4)QVC(UniMod:4)PVHQILYEGK3	64773.5	74536.1	67170.7
A0A8I5ZXC8	A0A8I5ZXC8	A0A8I5ZXC8_RAT	Mrps16	Mitochondrial ribosomal protein S16	1	EVFLASQK	EVFLASQK	2	EVFLASQK2	6106.07	6752.18	10977.1
G3V6N2	G3V6N2	G3V6N2_RAT	Tmed4	Transmembrane p24 trafficking protein 4	1	EVFLPSTPGLGMHVEVK	EVFLPSTPGLGMHVEVK	3	EVFLPSTPGLGMHVEVK3	17547.5	18927.1	12918.3
G3V6N2	G3V6N2	G3V6N2_RAT	Tmed4	Transmembrane p24 trafficking protein 4	1	EVFLPSTPGLGMHVEVKDPDGK	EVFLPSTPGLGMHVEVKDPDGK	3	EVFLPSTPGLGMHVEVKDPDGK3	27747.1	23931	28422.1
G3V6N2	G3V6N2	G3V6N2_RAT	Tmed4	Transmembrane p24 trafficking protein 4	1	EVFLPSTPGLGMHVEVKDPDGK	EVFLPSTPGLGMHVEVKDPDGK	4	EVFLPSTPGLGMHVEVKDPDGK4	48255.8	41039.2	45749.4
A0A8I5ZTB8	A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	EVFPENGWK	EVFPENGWK	2	EVFPENGWK2	15403.3	17525	11268.4
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	EVFPGTK	EVFPGTK	1	EVFPGTK1	31690.9	28862.1	35227.1
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	EVFPGTK	EVFPGTK	2	EVFPGTK2	838128	814286	951149
A0A8I6ALR3	A0A8I6ALR3	A0A8I6ALR3_RAT	Sh2d1b2	Uncharacterized LOC102556681	1	EVFPTLEEIIFK	EVFPTLEEIIFK	2	EVFPTLEEIIFK2	29923.9	15985.2	22646
D3ZWA8	D3ZWA8	D3ZWA8_RAT	Appl1	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1	1	EVFQIASNDHDAAINR	EVFQIASNDHDAAINR	3	EVFQIASNDHDAAINR3	28025.5	42550.8	40458.8
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	EVFQTASER	EVFQTASER	2	EVFQTASER2	15351.1	17798.7	14160.1
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	EVFSKPISWEELLQ	EVFSKPISWEELLQ	2	EVFSKPISWEELLQ2		7573.69	8538.02
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	EVFSTQADLSGITGDK	EVFSTQADLSGITGDK	2	EVFSTQADLSGITGDK2	124862	165599	130287
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	EVFSTQADLSGITGDK	EVFSTQADLSGITGDK	3	EVFSTQADLSGITGDK3		14576.9	17248
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	EVFSTQADLSGITGDKDLMVSQVVHK	EVFSTQADLSGITGDKDLMVSQVVHK	3	EVFSTQADLSGITGDKDLMVSQVVHK3	62050.5	61479.7	55898.7
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	EVFSTQADLSGITGDKDLMVSQVVHK	EVFSTQADLSGITGDKDLMVSQVVHK	4	EVFSTQADLSGITGDKDLMVSQVVHK4	388859	334301	297723
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	EVGDELGAKPQLEMVTEATSDTSK	EVGDELGAKPQLEMVTEATSDTSK	3	EVGDELGAKPQLEMVTEATSDTSK3	1962.87		2689.61
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	EVGDGTTSVVIIAAELLK	EVGDGTTSVVIIAAELLK	3	EVGDGTTSVVIIAAELLK3		2445.96	
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	EVGDQLQR	EVGDQLQR	2	EVGDQLQR2	36878.8	36790.1	29215.7
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	EVGDYGQLHETEVLLK	EVGDYGQLHETEVLLK	2	EVGDYGQLHETEVLLK2	1547.95	1938.82	
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	EVGDYGQLHETEVLLK	EVGDYGQLHETEVLLK	3	EVGDYGQLHETEVLLK3	41856.5	37590.3	39558.3
A0A0G2K435	A0A0G2K435	A0A0G2K435_RAT	Dnajc7	DnaJ heat shock protein family (Hsp40) member C7	1	EVGEAFTILSDPKK	EVGEAFTILSDPKK	3	EVGEAFTILSDPKK3	4633.21		4849.64
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	EVGETLLYYGCR	EVGETLLYYGC(UniMod:4)R	2	EVGETLLYYGC(UniMod:4)R2	16457.4	19382	24339.8
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	EVGETLLYYGCR	EVGETLLYYGC(UniMod:4)R	3	EVGETLLYYGC(UniMod:4)R3	4599.41	2757.6	7324.68
P51650	P51650	SSDH_RAT	Aldh5a1	Succinate-semialdehyde dehydrogenase, mitochondrial	1	EVGEVLCTDPLVSK	EVGEVLC(UniMod:4)TDPLVSK	2	EVGEVLC(UniMod:4)TDPLVSK2		5483.41	
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	EVGGLYVPSR	EVGGLYVPSR	2	EVGGLYVPSR2	79665.5	84489.4	81530.7
A0A096MJ11	A0A096MJ11	A0A096MJ11_RAT	Gsdmd	Gasdermin D	1	EVGGSGGELIPVDCLR	EVGGSGGELIPVDC(UniMod:4)LR	2	EVGGSGGELIPVDC(UniMod:4)LR2	64043.3	69845	72953.6
Q4V7C7	A0A8I6GL35;Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	0	EVGIPPEQSLETAK	EVGIPPEQSLETAK	2	EVGIPPEQSLETAK2	84948.3	89880.3	79169.2
A0A8I5ZZ89	A0A8I5ZZ89	A0A8I5ZZ89_RAT	Elp3	Elongator complex protein 3	1	EVGIQEIHHR	EVGIQEIHHR	3	EVGIQEIHHR3	5366.38	3743.77	
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	EVGIYLNSK	EVGIYLNSK	2	EVGIYLNSK2	199202	166046	196332
Q8VHF5	Q8VHF5	CISY_RAT	Cs	Citrate synthase, mitochondrial	1	EVGKDVSDEK	EVGKDVSDEK	2	EVGKDVSDEK2			22652.5
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	EVGLDLFFPK	EVGLDLFFPK	2	EVGLDLFFPK2	65649.6	44597	63491.4
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	EVGMPADYVNK	EVGMPADYVNK	2	EVGMPADYVNK2	16675.8	22395.4	20532.6
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	EVGMYGK	EVGMYGK	2	EVGMYGK2	45357.8	43081.2	50273.9
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	EVGPLDCK	EVGPLDC(UniMod:4)K	2	EVGPLDC(UniMod:4)K2	17214.2	11112.8	17650.5
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	EVGQQLQDDLMK	EVGQQLQDDLMK	2	EVGQQLQDDLMK2	17482.4	15509.9	19400
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	EVGRPMCMTSVQMSNKEPEDMITGER	EVGRPMC(UniMod:4)MTSVQMSNKEPEDMITGER	4	EVGRPMC(UniMod:4)MTSVQMSNKEPEDMITGER4	7287.11	7591.76	
A0A8I6AH91	A0A8I5ZWT0;Q6AYU2;D3ZCS3;A0A8I6GB14;A0A8I6AH91;A0A8I6GAM5	A0A8I6AH91_RAT	Pcbp1	Poly(rC) binding protein 1	0	EVGSIIGK	EVGSIIGK	2	EVGSIIGK2	176656	170952	209220
P07943	P07943;A0A8I6A068	ALDR_RAT	Akr1b1	Aldo-keto reductase family 1 member B1	0	EVGVALQEK	EVGVALQEK	2	EVGVALQEK2	34509.8	24644.6	
O88989	O88989	MDHC_RAT	Mdh1	Malate dehydrogenase, cytoplasmic	1	EVGVYEALK	EVGVYEALK	2	EVGVYEALK2	65383.5	75417.1	68619
A0A8I5ZTW6	A0A8I5ZTW6	A0A8I5ZTW6_RAT	Gopc	Golgi associated PDZ and coiled-coil motif containing	1	EVHDQLLQLHSTQLQLHAK	EVHDQLLQLHSTQLQLHAK	4	EVHDQLLQLHSTQLQLHAK4	2551.69	3205.5	2369.26
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	EVHESESHQLALQK	EVHESESHQLALQK	3	EVHESESHQLALQK3	5101.27	7347.16	5881.95
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	EVHESESHQLALQK	EVHESESHQLALQK	4	EVHESESHQLALQK4	9724.41	13995.8	5357.07
D4A4H5	D4A4H5	D4A4H5_RAT	Sdf2	Stromal cell derived factor 2	1	EVHGMAQPSQNNYWK	EVHGMAQPSQNNYWK	2	EVHGMAQPSQNNYWK2	1497.61	4053.73	1312.64
D4A4H5	D4A4H5	D4A4H5_RAT	Sdf2	Stromal cell derived factor 2	1	EVHGMAQPSQNNYWK	EVHGMAQPSQNNYWK	3	EVHGMAQPSQNNYWK3	23776.8	21530.4	28412.2
Q9QZR8	Q9QZR8	PDZD2_RAT	Pdzd2	PDZ domain-containing protein 2	1	EVHPDSSETPTVAEQVHQPESLSQPVSPR	EVHPDSSETPTVAEQVHQPESLSQPVSPR	4	EVHPDSSETPTVAEQVHQPESLSQPVSPR4	3597.83		
D3ZLT4	D3ZLT4	D3ZLT4_RAT	Or4d5	Olfactory receptor 1339	1	EVIAAMK	EVIAAMK	2	EVIAAMK2	399749	369789	394389
Q5RJS6	Q5RJS6	MSPD1_RAT	Mospd1	Motile sperm domain-containing protein 1	1	EVIATLLPSAK	EVIATLLPSAK	2	EVIATLLPSAK2	55621.2	33127.9	43278.1
D4A2C6	D4A2C6	D4A2C6_RAT	Lsm4	U6 snRNA-associated Sm-like protein LSm4	1	EVICTSR	EVIC(UniMod:4)TSR	2	EVIC(UniMod:4)TSR2	63290.8	53994.5	70276.1
E9PSP1	E9PSP1	E9PSP1_RAT	Pltp	Phospholipid transfer protein	1	EVIDKNR	EVIDKNR	2	EVIDKNR2			10212.7
P21213	P21213	HUTH_RAT	Hal	Histidine ammonia-lyase	1	EVIDSIIK	EVIDSIIK	2	EVIDSIIK2	11105.8		6333.8
G3V828	G3V828	G3V828_RAT	Cnpy3	Canopy FGF signaling regulator 3	1	EVIDTGYGILDR	EVIDTGYGILDR	2	EVIDTGYGILDR2	6441.71	4510.09	1974.91
Q8R553	Q8R553	CSTN3_RAT	Clstn3	Calsyntenin-3	1	EVIECLYACR	EVIEC(UniMod:4)LYAC(UniMod:4)R	2	EVIEC(UniMod:4)LYAC(UniMod:4)R2	6818.04	5433.55	4809.67
D4A8B0	D4A8B0	D4A8B0_RAT	Sec14l5	SEC14-like lipid binding 5	1	EVIEHYLSELISQGASHIPR	EVIEHYLSELISQGASHIPR	4	EVIEHYLSELISQGASHIPR4	8916.76	7627.8	2523.78
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	EVIELPLTNPELFQR	EVIELPLTNPELFQR	2	EVIELPLTNPELFQR2	244793	243729	255710
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	EVIELPLTNPELFQR	EVIELPLTNPELFQR	3	EVIELPLTNPELFQR3	21724.5	29086.2	12907.1
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	EVIELPVK	EVIELPVK	2	EVIELPVK2	66615.6	57931.4	69601.1
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	EVIELPVKHPELFEALGIAQPK	EVIELPVKHPELFEALGIAQPK	3	EVIELPVKHPELFEALGIAQPK3	18676.3	12685.3	23210.9
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	EVIELPVKHPELFEALGIAQPK	EVIELPVKHPELFEALGIAQPK	4	EVIELPVKHPELFEALGIAQPK4	21458.2	24651.1	20505
O54923	O54923	EXOC6_RAT	Exoc6	Exocyst complex component 6	1	EVIEQTEDIIR	EVIEQTEDIIR	2	EVIEQTEDIIR2	22364.4	13576.7	14439.5
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	EVIFSMEEGSVK	EVIFSMEEGSVK	2	EVIFSMEEGSVK2	59072.5	59705.9	38222.6
Q8CIZ5	F1LVL9;Q8CIZ5	DMBT1_RAT	Dmbt1	Deleted in malignant brain tumors 1 protein	0	EVIFTIPYTGCGTTK	EVIFTIPYTGC(UniMod:4)GTTK	2	EVIFTIPYTGC(UniMod:4)GTTK2	3.05847e+06	3.84693e+06	3.58516e+06
Q8CIZ5	F1LVL9;Q8CIZ5	DMBT1_RAT	Dmbt1	Deleted in malignant brain tumors 1 protein	0	EVIFTIPYTGCGTTK	EVIFTIPYTGC(UniMod:4)GTTK	3	EVIFTIPYTGC(UniMod:4)GTTK3	115179	184342	197953
D3ZX38	D3ZX38	D3ZX38_RAT	Pfdn1	Prefoldin subunit 1	1	EVIHNQLLEK	EVIHNQLLEK	2	EVIHNQLLEK2	9181.54	6781.47	13936.2
D3ZX38	D3ZX38	D3ZX38_RAT	Pfdn1	Prefoldin subunit 1	1	EVIHNQLLEK	EVIHNQLLEK	3	EVIHNQLLEK3	39556	43401.7	32530
A0A8I6AUQ7	A0A8I6AUQ7	A0A8I6AUQ7_RAT	Zpr1	ZPR1 zinc finger	1	EVIIMATNCER	EVIIMATNC(UniMod:4)ER	2	EVIIMATNC(UniMod:4)ER2	8061.46		6988.2
P14882	P14882	PCCA_RAT	Pcca	Propionyl-CoA carboxylase alpha chain, mitochondrial	1	EVIINTR	EVIINTR	2	EVIINTR2	48219.6	45860.4	52514.2
A2VCX1	A2VCX1	TIPRL_RAT	Tiprl	TIP41-like protein	1	EVIKPYDWTYTTDYK	EVIKPYDWTYTTDYK	3	EVIKPYDWTYTTDYK3	7825.59	15400.9	15430
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	EVILAQESDSK	EVILAQESDSK	2	EVILAQESDSK2	2308.89	7004.06	3318.77
Q9JI92	Q9JI92	SDCB1_RAT	Sdcbp	Syntenin-1	1	EVILCKDQDGK	EVILC(UniMod:4)KDQDGK	3	EVILC(UniMod:4)KDQDGK3	7378.32	8240.16	14943.6
D3ZP13	D3ZP13	D3ZP13_RAT	Qsox2	Sulfhydryl oxidase	1	EVILDLIPYDNIMVSR	EVILDLIPYDNIMVSR	2	EVILDLIPYDNIMVSR2	11654.7	8123.69	13182.2
Q5RK09	Q5RK09	EIF3G_RAT	Eif3g	Eukaryotic translation initiation factor 3 subunit G	1	EVINGNIK	EVINGNIK	2	EVINGNIK2	67255	66453.4	62514.4
P53563	E9PU78;P53563	B2CL1_RAT	Bcl2l1	Bcl-2-like protein 1	0	EVIPMAAVK	EVIPMAAVK	2	EVIPMAAVK2	118891	106442	110726
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	EVIPVNILDAQEEMK	EVIPVNILDAQEEMK	2	EVIPVNILDAQEEMK2	9875.16	4331.36	6043.08
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	EVIPVNILDAQEEMKEVAR	EVIPVNILDAQEEMKEVAR	3	EVIPVNILDAQEEMKEVAR3	18396	12743.8	19043.9
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	EVIQEWSLTNIK	EVIQEWSLTNIK	2	EVIQEWSLTNIK2	790205	749601	745589
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	EVIQEWSLTNIK	EVIQEWSLTNIK	3	EVIQEWSLTNIK3	57946	50683.3	73804.7
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	EVIQEWSLTNIKR	EVIQEWSLTNIKR	2	EVIQEWSLTNIKR2	7962.93	6498.49	13346.9
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	EVIQEWSLTNIKR	EVIQEWSLTNIKR	3	EVIQEWSLTNIKR3	85141.4	122509	111816
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	EVIQSDSLWLVEFYAPWCGHCQR	EVIQSDSLWLVEFYAPWC(UniMod:4)GHC(UniMod:4)QR	3	EVIQSDSLWLVEFYAPWC(UniMod:4)GHC(UniMod:4)QR3	8402.92	10739.5	12354.3
A0A8I6ATU9	A0A8I6ATU9	A0A8I6ATU9_RAT	Atxn2	Ataxin 2	1	EVISWGSGR	EVISWGSGR	2	EVISWGSGR2	6708.2	5301.46	6201.98
Q5BJQ2	Q5BJQ2	MINY1_RAT	Mindy1	Ubiquitin carboxyl-terminal hydrolase MINDY-1	1	EVITSDELLTHLGNCLLSIKPQEK	EVITSDELLTHLGNC(UniMod:4)LLSIKPQEK	3	EVITSDELLTHLGNC(UniMod:4)LLSIKPQEK3	20398.8	8675.12	9873.71
Q5BJQ2	Q5BJQ2	MINY1_RAT	Mindy1	Ubiquitin carboxyl-terminal hydrolase MINDY-1	1	EVITSDELLTHLGNCLLSIKPQEK	EVITSDELLTHLGNC(UniMod:4)LLSIKPQEK	4	EVITSDELLTHLGNC(UniMod:4)LLSIKPQEK4	26515.8	28247.3	20576.8
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	EVIVGPDTTSYSLADLSPSTHYTAR	EVIVGPDTTSYSLADLSPSTHYTAR	3	EVIVGPDTTSYSLADLSPSTHYTAR3	801793	967968	793274
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	EVIVGPDTTSYSLADLSPSTHYTAR	EVIVGPDTTSYSLADLSPSTHYTAR	4	EVIVGPDTTSYSLADLSPSTHYTAR4	8209.15	17435.9	2487.13
D3ZFQ3	D3ZFQ3	D3ZFQ3_RAT	Nubpl	Nucleotide binding protein-like	1	EVIVVASGK	EVIVVASGK	2	EVIVVASGK2	17902.4	15868.9	26134.6
P32038	P32038	CFAD_RAT	Cfd	Complement factor D	1	EVKPGTLCDVAGWGVVTHAGR	EVKPGTLC(UniMod:4)DVAGWGVVTHAGR	3	EVKPGTLC(UniMod:4)DVAGWGVVTHAGR3	18318.7	14244.4	18243
P32038	P32038	CFAD_RAT	Cfd	Complement factor D	1	EVKPGTLCDVAGWGVVTHAGR	EVKPGTLC(UniMod:4)DVAGWGVVTHAGR	4	EVKPGTLC(UniMod:4)DVAGWGVVTHAGR4	223069	199842	194534
Q8VIL3	Q8VIL3	ZWINT_RAT	Zwint	ZW10 interactor	1	EVLAEAASVLEPVGLPEEAELPAK	EVLAEAASVLEPVGLPEEAELPAK	3	EVLAEAASVLEPVGLPEEAELPAK3	59081.1	60471.9	60953.4
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	EVLAELEALEER	EVLAELEALEER	2	EVLAELEALEER2	103700	114630	113236
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	EVLAELEALEER	EVLAELEALEER	3	EVLAELEALEER3	15712.3	14942.4	20486.4
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	EVLASDLVVK	EVLASDLVVK	2	EVLASDLVVK2	77497	77643.9	115964
D3ZER6	D3ZER6	D3ZER6_RAT	Tnpo2	Transportin 2	1	EVLASHLVQLIPILVNGMK	EVLASHLVQLIPILVNGMK	3	EVLASHLVQLIPILVNGMK3	3499.59	8244.81	6479.36
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	EVLASQLLVLTGQR	EVLASQLLVLTGQR	2	EVLASQLLVLTGQR2	6649.07	4812.34	
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	EVLASQLLVLTGQR	EVLASQLLVLTGQR	3	EVLASQLLVLTGQR3		3775.75	6548.13
Q5XIP1	Q5XIP1	PELO_RAT	Pelo	Protein pelota homolog	1	EVLCDPTVASR	EVLC(UniMod:4)DPTVASR	2	EVLC(UniMod:4)DPTVASR2	53087.7	41642.7	34756.5
F1M9Q3	F1M9Q3	F1M9Q3_RAT	Ltn1	E3 ubiquitin-protein ligase listerin	1	EVLDDLTQEDLK	EVLDDLTQEDLK	2	EVLDDLTQEDLK2	6247.57	5898.06	4679.79
D3ZE72	D3ZE72	D3ZE72_RAT	Metap1	Methionine aminopeptidase	1	EVLDIAAGMIK	EVLDIAAGMIK	2	EVLDIAAGMIK2	9953.18	11094.2	11294.2
O35397	O35397;A0A8I5ZLI0	CASP6_RAT	Casp6	Caspase-6	0	EVLDPAEQYK	EVLDPAEQYK	2	EVLDPAEQYK2	22765.9	23692.2	25080.5
Q9WUD9	Q9WUD9	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	1	EVLDQVER	EVLDQVER	2	EVLDQVER2	302736	276110	293860
D4AE59	D4AE59	STK11_RAT	Stk11	Serine/threonine-protein kinase STK11	1	EVLDSETLCR	EVLDSETLC(UniMod:4)R	2	EVLDSETLC(UniMod:4)R2	7986.85	3425.85	6240.16
D4A3E8	D4A3E8	D4A3E8_RAT	Mrps27	Mitochondrial ribosomal protein S27	1	EVLDVLDGVLK	EVLDVLDGVLK	2	EVLDVLDGVLK2	8476.98	7140.15	6458.11
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	EVLEALGEVMVNRPR	EVLEALGEVMVNRPR	3	EVLEALGEVMVNRPR3	16304	21045.2	13641.9
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	EVLEALGEVMVNRPRD	EVLEALGEVMVNRPRD	3	EVLEALGEVMVNRPRD3	7126.18	15666.5	9359.23
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	EVLEDFAEDGEK	EVLEDFAEDGEK	2	EVLEDFAEDGEK2	74208.4	69252.5	67589.8
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	EVLEDFAEDGEKK	EVLEDFAEDGEKK	2	EVLEDFAEDGEKK2	5173.1	3834.45	
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	EVLEDFAEDGEKK	EVLEDFAEDGEKK	3	EVLEDFAEDGEKK3	31526.1	29864.3	41264.7
A0A8I5ZNK2	A0A8I5ZNK2	A0A8I5ZNK2_RAT	Oxsr1	non-specific serine/threonine protein kinase	1	EVLEGLEYLHK	EVLEGLEYLHK	2	EVLEGLEYLHK2	4767.51		8958.53
A0A8I5ZNK2	A0A8I5ZNK2	A0A8I5ZNK2_RAT	Oxsr1	non-specific serine/threonine protein kinase	1	EVLEGLEYLHK	EVLEGLEYLHK	3	EVLEGLEYLHK3	18131.4	15307.6	21620.1
P34067	P34067	PSB4_RAT	Psmb4	Proteasome subunit beta type-4	1	EVLEKQPVLSQTEAR	EVLEKQPVLSQTEAR	3	EVLEKQPVLSQTEAR3	29807.2	20906.1	31341.2
Q62844	Q62844;F1LM93	FYN_RAT	Fyn	Tyrosine-protein kinase Fyn	0	EVLEQVER	EVLEQVER	2	EVLEQVER2	106217	94956.1	99424.4
P05369	A0A8I5ZVV7;P05369	FPPS_RAT	Fdps	Farnesyl pyrophosphate synthase	0	EVLEYNTVGGK	EVLEYNTVGGK	2	EVLEYNTVGGK2	23161.5	24081.9	23303.7
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	EVLGDAVPDDILTEAILK	EVLGDAVPDDILTEAILK	2	EVLGDAVPDDILTEAILK2	33143.5	46042	28348.2
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	EVLGDLLLTKPTEASADQLPSPSQLR	EVLGDLLLTKPTEASADQLPSPSQLR	3	EVLGDLLLTKPTEASADQLPSPSQLR3	174728	159008	174950
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	EVLGDLLLTKPTEASADQLPSPSQLR	EVLGDLLLTKPTEASADQLPSPSQLR	4	EVLGDLLLTKPTEASADQLPSPSQLR4	23095.7	20408	34477.3
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	EVLGFGGPDTR	EVLGFGGPDTR	2	EVLGFGGPDTR2	75964.9	71077.1	81234
Q5M9G8	Q5M9G8	DCA11_RAT	Dcaf11	DDB1- and CUL4-associated factor 11	1	EVLGGANDGCLYVFDR	EVLGGANDGC(UniMod:4)LYVFDR	2	EVLGGANDGC(UniMod:4)LYVFDR2	2651.06	2453.15	1790.86
F1LU14	F1LU14	F1LU14_RAT	Snx32	Sorting nexin	1	EVLGGFLK	EVLGGFLK	2	EVLGGFLK2	16501.4	12483.2	11351.7
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	EVLGILVSYR	EVLGILVSYR	2	EVLGILVSYR2	42765.1	32890.6	35981
P62907	F1LYQ7;A0A8I5ZRG4;A0A8I6A8X9;A0A8I5Y9H0;P62907;A0A8I5ZVS9	RL10A_RAT	Rpl10a	Large ribosomal subunit protein uL1	0	EVLHGNQR	EVLHGNQR	2	EVLHGNQR2			21663.8
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	EVLHMLVDLAK	EVLHMLVDLAK	2	EVLHMLVDLAK2	7604.31	9730.93	3559.01
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	EVLHMLVDLAK	EVLHMLVDLAK	3	EVLHMLVDLAK3	60257.7	50083.7	55211.5
A0A0G2K583	A0A0G2K583	A0A0G2K583_RAT	Mtap	S-methyl-5'-thioadenosine phosphorylase	1	EVLIEMAK	EVLIEMAK	2	EVLIEMAK2	5658.82	8119.22	11675.8
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	EVLINNINR	EVLINNINR	2	EVLINNINR2	14720.5	6980.57	10779.7
P0C2C0	P0C2C0	RM22_RAT	Mrpl22	Large ribosomal subunit protein uL22m	1	EVLLEAQDMAVR	EVLLEAQDMAVR	2	EVLLEAQDMAVR2	3119.02	2549.01	4870.77
D3ZWC6	D3ZWC6;D3ZMX6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	0	EVLLEVK	EVLLEVK	2	EVLLEVK2	185102	188923	175480
Q9QY17	Q9QY17	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	1	EVLLEVQK	EVLLEVQK	1	EVLLEVQK1	2650.79	2401.73	
Q9QY17	Q9QY17	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	1	EVLLEVQK	EVLLEVQK	2	EVLLEVQK2	874493	923875	867669
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	EVLLFPAMKPEDK	EVLLFPAMKPEDK	2	EVLLFPAMKPEDK2	13528.7	6559.34	11177.8
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	EVLLFPAMKPEDK	EVLLFPAMKPEDK	3	EVLLFPAMKPEDK3	29128.8	44243.1	41424.5
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	EVLLGLKPSEIK	EVLLGLKPSEIK	2	EVLLGLKPSEIK2	12486.5	12438.8	11471.1
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	EVLLGLKPSEIK	EVLLGLKPSEIK	3	EVLLGLKPSEIK3	126994	137057	209901
Q5XIS7	Q5XIS7	UBAP1_RAT	Ubap1	Ubiquitin-associated protein 1	1	EVLLLHNNDQDNALEDLMAR	EVLLLHNNDQDNALEDLMAR	3	EVLLLHNNDQDNALEDLMAR3	5842.36	5398.02	
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	EVLLQQSVMAYR	EVLLQQSVMAYR	2	EVLLQQSVMAYR2		2606.55	3113.88
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	EVLLVLK	EVLLVLK	2	EVLLVLK2	5828.61	4163.26	2028.47
D4AAU6	D4AAU6	D4AAU6_RAT	Ccdc25	Coiled-coil domain-containing protein 25	1	EVLMDCAHLVK	EVLMDC(UniMod:4)AHLVK	3	EVLMDC(UniMod:4)AHLVK3	6060.34		5719.79
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	EVLMVEVENVAHEDFQVTEEVK	EVLMVEVENVAHEDFQVTEEVK	3	EVLMVEVENVAHEDFQVTEEVK3	7784.1		3696.56
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	EVLNLLQEK	EVLNLLQEK	2	EVLNLLQEK2	32470.7	33203.7	37224
B0BN18	B0BN18	PFD2_RAT	Pfdn2	Prefoldin subunit 2	1	EVLPALEGNK	EVLPALEGNK	2	EVLPALEGNK2	82176.2	67462.4	93899.9
B0BN18	B0BN18	PFD2_RAT	Pfdn2	Prefoldin subunit 2	1	EVLPALEGNKEQIQK	EVLPALEGNKEQIQK	3	EVLPALEGNKEQIQK3	80024	96189.6	82077.8
F1M471	F1M471	F1M471_RAT	Epm2aip1	EPM2A interacting protein 1	1	EVLPDHVGVLEGIDLSPEITR	EVLPDHVGVLEGIDLSPEITR	3	EVLPDHVGVLEGIDLSPEITR3	7362.57	6486.99	5822.07
P05544	P05544;P09005	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	EVLPELGIK	EVLPELGIK	2	EVLPELGIK2	5.87388e+06	5.52987e+06	5.61237e+06
P05544	P05544;P09005	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	EVLPELGIKK	EVLPELGIKK	2	EVLPELGIKK2	63879	83556.5	91321.5
D3ZL11	D3ZL11	D3ZL11_RAT	Rbsn	Rabenosyn, RAB effector	1	EVLPFQLEPIR	EVLPFQLEPIR	2	EVLPFQLEPIR2	8333.54	4943.76	1944.09
A1L134	A1L134	AUP1_RAT	Aup1	Lipid droplet-regulating VLDL assembly factor AUP1	1	EVLPHVPLNVIQR	EVLPHVPLNVIQR	3	EVLPHVPLNVIQR3	48192.9	44968.4	41573.4
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	EVLPLAFLGMHEIADEEK	EVLPLAFLGMHEIADEEK	3	EVLPLAFLGMHEIADEEK3	19623.4	42851.5	13956.1
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	EVLPLMNAAGSR	EVLPLMNAAGSR	2	EVLPLMNAAGSR2	243728	231665	230806
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	EVLQALDPQVDYLR	EVLQALDPQVDYLR	2	EVLQALDPQVDYLR2	55455.6	63120.1	46275.6
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	EVLQALDPQVDYLR	EVLQALDPQVDYLR	3	EVLQALDPQVDYLR3	4181.72	4255.58	4664.99
Q2PQA9	P56536;Q2PQA9;Q6QLM7	KINH_RAT	Kif5b	Kinesin-1 heavy chain	0	EVLQALEELAVNYDQK	EVLQALEELAVNYDQK	2	EVLQALEELAVNYDQK2	22491.3	18707.8	20379.9
Q2PQA9	P56536;Q2PQA9;Q6QLM7	KINH_RAT	Kif5b	Kinesin-1 heavy chain	0	EVLQALEELAVNYDQK	EVLQALEELAVNYDQK	3	EVLQALEELAVNYDQK3	25660	45411.2	42808.7
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	EVLQHLETEKSPEESAALVK	EVLQHLETEKSPEESAALVK	4	EVLQHLETEKSPEESAALVK4	7628.95	6554.98	4768.15
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	EVLQNQLGIRPPTR	EVLQNQLGIRPPTR	3	EVLQNQLGIRPPTR3	88512.1	68242	91437.8
Q6TMG5	Q6TMG5	NEMO_RAT	Ikbkg	NF-kappa-B essential modulator	1	EVLQQQHSVQVDQLR	EVLQQQHSVQVDQLR	3	EVLQQQHSVQVDQLR3	19138.7	19423.9	16849.1
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	EVLQSLPLTEIIR	EVLQSLPLTEIIR	2	EVLQSLPLTEIIR2	49409.3	50300.7	56334.5
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	EVLSDPEMR	EVLSDPEMR	2	EVLSDPEMR2	80353.7	66863	69571.2
D4A234	D4A234	D4A234_RAT	Uri1	URI1, prefoldin-like chaperone	1	EVLSEASEEPAK	EVLSEASEEPAK	2	EVLSEASEEPAK2	843.096	1835.02	
P32198	P32198	CPT1A_RAT	Cpt1a	Carnitine O-palmitoyltransferase 1, liver isoform	1	EVLSEPWR	EVLSEPWR	2	EVLSEPWR2	27946.2	28667	20933.1
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	EVLTCILCQEEQEVK	EVLTC(UniMod:4)ILC(UniMod:4)QEEQEVK	2	EVLTC(UniMod:4)ILC(UniMod:4)QEEQEVK2	14016.8	24657.8	13491.4
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	EVLTCILCQEEQEVK	EVLTC(UniMod:4)ILC(UniMod:4)QEEQEVK	3	EVLTC(UniMod:4)ILC(UniMod:4)QEEQEVK3	5745.65	12060	7908.42
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	EVLTEIFK	EVLTEIFK	2	EVLTEIFK2	9336.32	13182.2	12581.8
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	EVLVENFSNFSNR	EVLVENFSNFSNR	2	EVLVENFSNFSNR2	128272	129398	137086
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	EVLVENFSNFSNR	EVLVENFSNFSNR	3	EVLVENFSNFSNR3	19502.5	15239.3	19331.2
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	EVMDTWTSQMGYPVVTVSGK	EVMDTWTSQMGYPVVTVSGK	3	EVMDTWTSQMGYPVVTVSGK3	15766.1	9574.3	15333.7
B5DEZ6	B5DEZ6;A0A8I6AB87	B5DEZ6_RAT	Gnpda2	Glucosamine-6-phosphate isomerase	0	EVMILITGAHK	EVMILITGAHK	3	EVMILITGAHK3	4664.78	2870.1	3620.28
P35435	P35435	ATPG_RAT	Atp5f1c	ATP synthase subunit gamma, mitochondrial	1	EVMIVGIGEK	EVMIVGIGEK	2	EVMIVGIGEK2	355472	392383	385713
Q6P799	Q6P799	SYSC_RAT	Sars1	Serine--tRNA ligase, cytoplasmic	1	EVMQEVAQLSQFDEELYK	EVMQEVAQLSQFDEELYK	3	EVMQEVAQLSQFDEELYK3	7922.13	8106.72	9137.39
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	EVMSDLEESK	EVMSDLEESK	2	EVMSDLEESK2	144415	172467	135741
P51799	P51799	CLCN7_RAT	Clcn7	H(+)/Cl(-) exchange transporter 7	1	EVMSTPVTCLR	EVMSTPVTC(UniMod:4)LR	2	EVMSTPVTC(UniMod:4)LR2	11614	6530.12	10895.5
P09527	P09527	RAB7A_RAT	Rab7a	Ras-related protein Rab-7a	1	EVMVDDR	EVMVDDR	2	EVMVDDR2	504437	576100	632984
P09527	P09527	RAB7A_RAT	Rab7a	Ras-related protein Rab-7a	1	EVMVDDRLVTMQIWDTAGQER	EVMVDDRLVTMQIWDTAGQER	3	EVMVDDRLVTMQIWDTAGQER3	7795.17	7338.67	15252.2
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	EVMYAYVDQHDFSGK	EVMYAYVDQHDFSGK	2	EVMYAYVDQHDFSGK2	3657.78	1302.92	2401.2
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	EVMYAYVDQHDFSGK	EVMYAYVDQHDFSGK	3	EVMYAYVDQHDFSGK3	26842.6	24189.9	24636.4
F1M9D0	F1M9D0	F1M9D0_RAT	Map3k2	Mitogen activated protein kinase kinase kinase 2	1	EVNALECEIQLLK	EVNALEC(UniMod:4)EIQLLK	2	EVNALEC(UniMod:4)EIQLLK2		3305.9	4109.58
F1LVL2	F1LVL2	F1LVL2_RAT	Icoslg	Inducible T-cell co-stimulator ligand	1	EVNAMVGSDVELR	EVNAMVGSDVELR	2	EVNAMVGSDVELR2	185885	169010	147555
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	EVNAVNCNTSWK	EVNAVNC(UniMod:4)NTSWK	2	EVNAVNC(UniMod:4)NTSWK2	8630.9	10635.8	19905.5
M0RAX2	M0RAX2	M0RAX2_RAT	Ndufs6l1	NADH dehydrogenase (ubiquinone) Fe-S protein 6	1	EVNENFAIDLIAQQPVNEVDHR	EVNENFAIDLIAQQPVNEVDHR	3	EVNENFAIDLIAQQPVNEVDHR3	13901.5	11086.3	19236
A0A096MJT6	A0A096MJT6	A0A096MJT6_RAT	Bltp1	Similar to RIKEN cDNA D630029K19	1	EVNEVIQK	EVNEVIQK	2	EVNEVIQK2	4830.67	4556.18	
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	EVNEVIQNPATITR	EVNEVIQNPATITR	2	EVNEVIQNPATITR2	28034.4	30366	17172.5
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	EVNLAVENAK	EVNLAVENAK	2	EVNLAVENAK2	101102	89863.7	108311
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	EVNLDFHTK	EVNLDFHTK	2	EVNLDFHTK2	56675.5	46393	52163.5
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	EVNLRPQMSQFLCLK	EVNLRPQMSQFLC(UniMod:4)LK	3	EVNLRPQMSQFLC(UniMod:4)LK3	32417.9	47245.4	29287.7
Q5GAM5	Q5GAM5	Q5GAM5_RAT	Ang2	Angiogenin ribonuclease 2	1	EVNTFIHGNK	EVNTFIHGNK	3	EVNTFIHGNK3	10930.5	7835.38	8181.3
Q5XI83	Q5XI83	VP35L_RAT	Vps35l	VPS35 endosomal protein-sorting factor-like	1	EVNTVLADVIK	EVNTVLADVIK	2	EVNTVLADVIK2	29029.5	21615.8	19407.1
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	EVPCFNIK	EVPC(UniMod:4)FNIK	2	EVPC(UniMod:4)FNIK2	84416.6	79615.3	60581.5
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	EVPDACFNHNGEHR	EVPDAC(UniMod:4)FNHNGEHR	2	EVPDAC(UniMod:4)FNHNGEHR2	362825	286211	331780
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	EVPDACFNHNGEHR	EVPDAC(UniMod:4)FNHNGEHR	3	EVPDAC(UniMod:4)FNHNGEHR3	2.8548e+06	2.5978e+06	2.65201e+06
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	EVPDACFNHNGEHR	EVPDAC(UniMod:4)FNHNGEHR	4	EVPDAC(UniMod:4)FNHNGEHR4	1.79295e+06	1.81172e+06	1.99248e+06
G3V965	G3V965	G3V965_RAT	Agpat5	1-acylglycerol-3-phosphate O-acyltransferase 5	1	EVPEEQEHMK	EVPEEQEHMK	2	EVPEEQEHMK2	44259.3	18912.1	
G3V965	G3V965	G3V965_RAT	Agpat5	1-acylglycerol-3-phosphate O-acyltransferase 5	1	EVPEEQEHMK	EVPEEQEHMK	3	EVPEEQEHMK3	87898	98909.6	128288
G3V965	G3V965	G3V965_RAT	Agpat5	1-acylglycerol-3-phosphate O-acyltransferase 5	1	EVPEEQEHMKK	EVPEEQEHMKK	2	EVPEEQEHMKK2			6098.46
G3V965	G3V965	G3V965_RAT	Agpat5	1-acylglycerol-3-phosphate O-acyltransferase 5	1	EVPEEQEHMKK	EVPEEQEHMKK	3	EVPEEQEHMKK3			32043.5
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	EVPEGWLIFVAER	EVPEGWLIFVAER	2	EVPEGWLIFVAER2	3335.75	3376.62	
F7FNG5	F7FNG5	F7FNG5_RAT	Cul4a	Cullin 4A	1	EVPEYLNHVSK	EVPEYLNHVSK	3	EVPEYLNHVSK3	6521.35		7454.55
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	EVPFADLSNMEIGMK	EVPFADLSNMEIGMK	2	EVPFADLSNMEIGMK2	104545	101957	126046
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	EVPFADLSNMEIGMK	EVPFADLSNMEIGMK	3	EVPFADLSNMEIGMK3	11621.3	13748.6	18613.7
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	EVPHLTVADFVR	EVPHLTVADFVR	3	EVPHLTVADFVR3	28573.9	35875.2	28126.6
Q8VHK0	Q8VHK0	ACOT8_RAT	Acot8	Acyl-coenzyme A thioesterase 8	1	EVPIEIK	EVPIEIK	2	EVPIEIK2	55720.3	31261.6	46060.6
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	EVPIFTK	EVPIFTK	2	EVPIFTK2	61665.2	56490.3	33563.4
A0A0G2K762	A0A0G2K762	A0A0G2K762_RAT	Abcf2	ATP binding cassette subfamily F member 2	1	EVPIPEHIDIYHLTR	EVPIPEHIDIYHLTR	4	EVPIPEHIDIYHLTR4	9871.9	4705.34	4250.83
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	EVPIVQTETK	EVPIVQTETK	2	EVPIVQTETK2	65015.3	49884.9	49758.4
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	EVPLIFPK	EVPLIFPK	2	EVPLIFPK2	56346.9	51477.6	43168.8
Q6GQP4	Q6GQP4	RAB31_RAT	Rab31	Ras-related protein Rab-31	1	EVPLKDAK	EVPLKDAK	2	EVPLKDAK2	27142.9	23202.4	25755.6
D4A3V2	D4A3V2	D4A3V2_RAT	Ndufa6	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6	1	EVPNTVHLMQLDITVK	EVPNTVHLMQLDITVK	3	EVPNTVHLMQLDITVK3	19375.5	24427.3	24602.8
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	EVPPSEPVAEPFPSGDIAPPGLISGGK	EVPPSEPVAEPFPSGDIAPPGLISGGK	3	EVPPSEPVAEPFPSGDIAPPGLISGGK3	49410.4	50109.5	73953.5
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	EVPQMCIPGK	EVPQMC(UniMod:4)IPGK	2	EVPQMC(UniMod:4)IPGK2	36046.5	27250.7	35692.6
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	EVPSLLK	EVPSLLK	1	EVPSLLK1	2951.01		3526.2
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	EVPSLLK	EVPSLLK	2	EVPSLLK2	457098	477757	518421
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	EVPSTASSYVDSALKPLYQLQSGHGDK	EVPSTASSYVDSALKPLYQLQSGHGDK	4	EVPSTASSYVDSALKPLYQLQSGHGDK4	8269.01	26150.4	
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	EVPTAASSSHFYSGYK	EVPTAASSSHFYSGYK	2	EVPTAASSSHFYSGYK2	28984.7	26661.5	24588.8
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	EVPTAASSSHFYSGYK	EVPTAASSSHFYSGYK	3	EVPTAASSSHFYSGYK3	384130	434378	372200
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	EVPTAASSSHFYSGYKK	EVPTAASSSHFYSGYKK	2	EVPTAASSSHFYSGYKK2	17496.2	20834.8	29745.6
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	EVPTAASSSHFYSGYKK	EVPTAASSSHFYSGYKK	3	EVPTAASSSHFYSGYKK3	63547.8	117679	89320.3
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	EVPTAASSSHFYSGYKK	EVPTAASSSHFYSGYKK	4	EVPTAASSSHFYSGYKK4	126333	257505	187519
Q9QZK5	Q9QZK5	HTRA1_RAT	Htra1	Serine protease HTRA1	1	EVPVASGSGFIVSEDGLIVTNAHVVTNK	EVPVASGSGFIVSEDGLIVTNAHVVTNK	3	EVPVASGSGFIVSEDGLIVTNAHVVTNK3	1408.78		2603.61
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	EVPVIFIHPLNTGLFR	EVPVIFIHPLNTGLFR	3	EVPVIFIHPLNTGLFR3	5958.95	18705.8	15447.2
O70351	O70351	HCD2_RAT	Hsd17b10	3-hydroxyacyl-CoA dehydrogenase type-2	1	EVQAALTLAK	EVQAALTLAK	2	EVQAALTLAK2	79638.1	48762.6	82346.6
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	EVQAAQAR	EVQAAQAR	1	EVQAAQAR1			120246
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	EVQAAQAR	EVQAAQAR	2	EVQAAQAR2	154607	207835	139776
Q5XIE4	Q5XIE4	Q5XIE4_RAT	Rchy1	Ring finger and CHY zinc finger domain containing 1	1	EVQCINCEK	EVQC(UniMod:4)INC(UniMod:4)EK	2	EVQC(UniMod:4)INC(UniMod:4)EK2	2813.39	1585.97	2174.97
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	EVQCLRDELQVIQK	EVQC(UniMod:4)LRDELQVIQK	3	EVQC(UniMod:4)LRDELQVIQK3	18876		12009.3
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	EVQDGIAPR	EVQDGIAPR	2	EVQDGIAPR2	550377	567465	601149
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	EVQDIVEK	EVQDIVEK	2	EVQDIVEK2	16430.7	8426.07	21853.3
A0A0G2K1D2	A0A0G2K1D2	A0A0G2K1D2_RAT	Rap1gds1	Rap1 GTPase-GDP dissociation stimulator 1	1	EVQDLAFLDVVSK	EVQDLAFLDVVSK	2	EVQDLAFLDVVSK2	5699.62		
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	EVQDLFEAQGNDR	EVQDLFEAQGNDR	2	EVQDLFEAQGNDR2	9554.19	11673.7	7886.24
Q5M8C6	Q5M8C6	FGL1_RAT	Fgl1	Fibrinogen-like protein 1	1	EVQFLDR	EVQFLDR	2	EVQFLDR2	61805.8	34077.6	53637.9
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	EVQGFESSTFQGYFK	EVQGFESSTFQGYFK	2	EVQGFESSTFQGYFK2	576640	484664	535591
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	EVQGFESSTFQGYFK	EVQGFESSTFQGYFK	3	EVQGFESSTFQGYFK3	76048.3	72758.8	69678.9
A0A8I6GLJ8	A0A8I6GLJ8	A0A8I6GLJ8_RAT	ENSRNOG00000071091	Ig-like domain-containing protein	1	EVQLMETGGGLVQPGK	EVQLMETGGGLVQPGK	2	EVQLMETGGGLVQPGK2	90079.7	75969.4	70621.8
A0A8I6GLJ8	A0A8I6GLJ8	A0A8I6GLJ8_RAT	ENSRNOG00000071091	Ig-like domain-containing protein	1	EVQLMETGGGLVQPGK	EVQLMETGGGLVQPGK	3	EVQLMETGGGLVQPGK3	12248.3	8331.28	12970.9
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	EVQLMLSR	EVQLMLSR	2	EVQLMLSR2	25978	32136.5	30614
A0A8I6AEV5	F1LYU3;A0A8I6AEV5;A0A8I6AD89;A0A8I6AH36;A0A8I6AKK2;A0A8I5Y662	A0A8I6AEV5_RAT	ENSRNOG00000063148	Ig-like domain-containing protein	0	EVQLVESGGGLVQPGR	EVQLVESGGGLVQPGR	2	EVQLVESGGGLVQPGR2	5.39218e+06	5.46413e+06	5.71541e+06
A0A8I6AEV5	F1LYU3;A0A8I6AEV5;A0A8I6AD89;A0A8I6AH36;A0A8I6AKK2;A0A8I5Y662	A0A8I6AEV5_RAT	ENSRNOG00000063148	Ig-like domain-containing protein	0	EVQLVESGGGLVQPGR	EVQLVESGGGLVQPGR	3	EVQLVESGGGLVQPGR3	1.04613e+06	1.09542e+06	1.17275e+06
A0A8I6AEV5	F1LYU3;A0A8I6AEV5;A0A8I6AD89;A0A8I6AKK2;A0A8I5Y662	A0A8I6AEV5_RAT	ENSRNOG00000063148	Ig-like domain-containing protein	0	EVQLVESGGGLVQPGRSLK	EVQLVESGGGLVQPGRSLK	3	EVQLVESGGGLVQPGRSLK3	10167.5	7745.26	13250.8
A0A8I6A6C3	A0A8I6A938;A0A8I6A6C3	A0A8I6A6C3_RAT	ENSRNOG00000067603	Ig-like domain-containing protein	0	EVQLVESGGGLVQPGSSLK	EVQLVESGGGLVQPGSSLK	2	EVQLVESGGGLVQPGSSLK2	84739.3	68264.4	84537.8
A0A8I6A6C3	A0A8I6A938;A0A8I6A6C3	A0A8I6A6C3_RAT	ENSRNOG00000067603	Ig-like domain-containing protein	0	EVQLVESGGGLVQPGSSLK	EVQLVESGGGLVQPGSSLK	3	EVQLVESGGGLVQPGSSLK3	136905	111394	118709
A0A8I5ZLW9	A0A8I6AAJ9;A0A8I5ZLW9;A0A8I6A5B2;A0A8I6A6Q3	A0A8I5ZLW9_RAT	ENSRNOG00000063672	Ig-like domain-containing protein	0	EVQLVESGGGLVQPK	EVQLVESGGGLVQPK	2	EVQLVESGGGLVQPK2	33093.1	42312.5	34648.7
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	EVQMMESEGLPSVTAR	EVQMMESEGLPSVTAR	2	EVQMMESEGLPSVTAR2	13289.2	9268.09	13544.6
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	EVQMVSSLR	EVQMVSSLR	2	EVQMVSSLR2	44475.7	39558.3	42902.2
F1LU14	F1LU14	F1LU14_RAT	Snx32	Sorting nexin	1	EVQPAESHQQLCCQR	EVQPAESHQQLC(UniMod:4)C(UniMod:4)QR	3	EVQPAESHQQLC(UniMod:4)C(UniMod:4)QR3	20836.8	14674.2	15306.9
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	EVQPGQSQVSYQGLPVQK	EVQPGQSQVSYQGLPVQK	3	EVQPGQSQVSYQGLPVQK3	130167	157036	130489
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	EVQQLQGK	EVQQLQGK	1	EVQQLQGK1	1553.03	561.584	805.999
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	EVQQLQGK	EVQQLQGK	2	EVQQLQGK2	76607.5	80931.3	84942.3
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	EVQQVTVTSPCVGANSCSLSQYR	EVQQVTVTSPC(UniMod:4)VGANSC(UniMod:4)SLSQYR	3	EVQQVTVTSPC(UniMod:4)VGANSC(UniMod:4)SLSQYR3	20815.7	14825.1	28349.3
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	EVQSEFVEVMNEIWANDQIR	EVQSEFVEVMNEIWANDQIR	3	EVQSEFVEVMNEIWANDQIR3	32646.5	21901.3	35599.9
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	EVQTITEK	EVQTITEK	2	EVQTITEK2	25236.8	39489.4	22617.3
P49242	P49242;M0R6L4	RS3A_RAT	Rps3a	Small ribosomal subunit protein eS1	0	EVQTNDLK	EVQTNDLK	2	EVQTNDLK2	41111.4	43336.2	35786.4
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	EVQTSELK	EVQTSELK	2	EVQTSELK2	9484.53	14894.6	20113
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	EVQTVTSIQK	EVQTVTSIQK	2	EVQTVTSIQK2	41884.7	41548.3	49683.8
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	EVQYIVLQNIATMSIQR	EVQYIVLQNIATMSIQR	3	EVQYIVLQNIATMSIQR3	26399.2	25734.9	39296.2
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	EVQYLLNK	EVQYLLNK	2	EVQYLLNK2	757316	777791	795670
Q04631	Q04631	FNTA_RAT	Fnta	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha	1	EVQYTLEMIK	EVQYTLEMIK	2	EVQYTLEMIK2	19780.2	11150.2	13387.7
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	EVRDEYVETLSK	EVRDEYVETLSK	3	EVRDEYVETLSK3	16780.2	19650.5	20616.7
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	EVSAQWDHLK	EVSAQWDHLK	2	EVSAQWDHLK2	8294.1	6619.34	11433.9
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	EVSAQWDHLK	EVSAQWDHLK	3	EVSAQWDHLK3	45906.3	55914.9	58156.1
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	EVSDGIVAPGYEEEALK	EVSDGIVAPGYEEEALK	2	EVSDGIVAPGYEEEALK2	28747.1	24167.5	43872.6
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	EVSEAVVEK	EVSEAVVEK	2	EVSEAVVEK2	421481	480454	446116
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	EVSFDVELPK	EVSFDVELPK	2	EVSFDVELPK2	2.78756e+06	3.05131e+06	2.27916e+06
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	EVSFDVELPK	EVSFDVELPK	3	EVSFDVELPK3	42652.3	51554.8	46278.9
D3ZT64	D3ZT64	D3ZT64_RAT	Atg2a	Autophagy related 2A	1	EVSFIWHLYGGR	EVSFIWHLYGGR	3	EVSFIWHLYGGR3	5393.74	9420.65	
O35796	O35796	C1QBP_RAT	C1qbp	Complement component 1 Q subcomponent-binding protein, mitochondrial	1	EVSFQTTGDSEWR	EVSFQTTGDSEWR	2	EVSFQTTGDSEWR2	17578.7	15739	27150.8
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	EVSFSNKPYFR	EVSFSNKPYFR	3	EVSFSNKPYFR3	44075.2	29140.5	31350.3
Q6QMY6	Q6QMY6	TSK_RAT	Tsku	Tsukushi	1	EVSISAFTTHSQGR	EVSISAFTTHSQGR	2	EVSISAFTTHSQGR2	22735.1	28262	26451.3
Q6QMY6	Q6QMY6	TSK_RAT	Tsku	Tsukushi	1	EVSISAFTTHSQGR	EVSISAFTTHSQGR	3	EVSISAFTTHSQGR3	223200	280672	254990
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	EVSKVTK	EVSKVTK	2	EVSKVTK2			29001.8
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	EVSMDDHK	EVSMDDHK	2	EVSMDDHK2	5600.59		3411.42
Q6P7R8	Q6P7R8	DHB12_RAT	Hsd17b12	Very-long-chain 3-oxoacyl-CoA reductase	1	EVSNNIK	EVSNNIK	1	EVSNNIK1	2698.81		
Q6P7R8	Q6P7R8	DHB12_RAT	Hsd17b12	Very-long-chain 3-oxoacyl-CoA reductase	1	EVSNNIK	EVSNNIK	2	EVSNNIK2	18245.2		51676.6
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	EVSQFTPVAFPIAK	EVSQFTPVAFPIAK	2	EVSQFTPVAFPIAK2	66995.7	82525	77509.8
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	EVSQFTPVAFPIAK	EVSQFTPVAFPIAK	3	EVSQFTPVAFPIAK3	2298.83	1661.56	2937.35
D4A164	D4A164	D4A164_RAT	Nebl	Nebulette	1	EVSQLQSEVAYK	EVSQLQSEVAYK	3	EVSQLQSEVAYK3		10785.2	13813.5
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	EVSQPDWTPPPEVTLTLTK	EVSQPDWTPPPEVTLTLTK	3	EVSQPDWTPPPEVTLTLTK3	607299	694410	621291
O88370	O88370	PI42C_RAT	Pip4k2c	Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma	1	EVSSEDIADMHSNLSNYHQYIVK	EVSSEDIADMHSNLSNYHQYIVK	3	EVSSEDIADMHSNLSNYHQYIVK3	3682.57	2634.65	
O88370	O88370	PI42C_RAT	Pip4k2c	Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma	1	EVSSEDIADMHSNLSNYHQYIVK	EVSSEDIADMHSNLSNYHQYIVK	4	EVSSEDIADMHSNLSNYHQYIVK4	3321.71	5976.33	6751.93
Q6P6Q9	Q6P6Q9	MICU1_RAT	Micu1	Calcium uptake protein 1, mitochondrial	1	EVSSHEGSAADTAAEPYPEEK	EVSSHEGSAADTAAEPYPEEK	3	EVSSHEGSAADTAAEPYPEEK3	66970.6	73151.4	73851.1
Q6P6Q9	Q6P6Q9	MICU1_RAT	Micu1	Calcium uptake protein 1, mitochondrial	1	EVSSHEGSAADTAAEPYPEEKK	EVSSHEGSAADTAAEPYPEEKK	4	EVSSHEGSAADTAAEPYPEEKK4	2866.51	4160.96	2686.97
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	EVSSRPSTPGLSVVSGISATSEDIPNK	EVSSRPSTPGLSVVSGISATSEDIPNK	3	EVSSRPSTPGLSVVSGISATSEDIPNK3	19531.7	28326.5	23670.5
A0A8J8YBF1	A0A8J8YBF1	A0A8J8YBF1_RAT	Slc30a6	Solute carrier family 30 member 6	1	EVSTLDGVLEVR	EVSTLDGVLEVR	2	EVSTLDGVLEVR2	2240.66	4499.72	6757.71
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	EVSTPGLQHPK	EVSTPGLQHPK	2	EVSTPGLQHPK2	4696.07	2767.68	
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	EVSTPGLQHPK	EVSTPGLQHPK	3	EVSTPGLQHPK3	20213.8	36331.9	28147.1
P62630	P62630;F1M6C2;M0R757	EF1A1_RAT	Eef1a1	Elongation factor 1-alpha 1	0	EVSTYIK	EVSTYIK	1	EVSTYIK1	2144.27	1224.29	2753.25
P62630	P62630;F1M6C2;M0R757	EF1A1_RAT	Eef1a1	Elongation factor 1-alpha 1	0	EVSTYIK	EVSTYIK	2	EVSTYIK2	124545	126516	137176
D3ZQ30	D3ZQ30	D3ZQ30_RAT	Telo2	Telomere length regulation protein TEL2 homolog	1	EVSVELAK	EVSVELAK	2	EVSVELAK2	8798.02	9555.31	5742.47
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	EVSVFTPSQPR	EVSVFTPSQPR	2	EVSVFTPSQPR2	34980.5	36034.5	38314.9
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	EVSVTIESSGTVSGTLHVNNGNR	EVSVTIESSGTVSGTLHVNNGNR	3	EVSVTIESSGTVSGTLHVNNGNR3	125545	59721.8	35262.2
P61227	P61227	RAP2B_RAT	Rap2b	Ras-related protein Rap-2b	1	EVSYGEGK	EVSYGEGK	2	EVSYGEGK2		313451	
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	EVTAAQVAR	EVTAAQVAR	2	EVTAAQVAR2	17080.8	15913.5	16881.7
P43884	P43884	PLIN1_RAT	Plin1	Perilipin-1	1	EVTALPTPLGFLGGVVHTVQK	EVTALPTPLGFLGGVVHTVQK	3	EVTALPTPLGFLGGVVHTVQK3	9418.82	5216.52	14993.2
D3ZUB7	D3ZUB7	D3ZUB7_RAT	Anapc4	Anaphase-promoting complex subunit 4	1	EVTCLAWRPDGK	EVTC(UniMod:4)LAWRPDGK	3	EVTC(UniMod:4)LAWRPDGK3	12339.7	15806.5	14346.9
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	EVTDGIVSTFNMHQQSCK	EVTDGIVSTFNMHQQSC(UniMod:4)K	3	EVTDGIVSTFNMHQQSC(UniMod:4)K3	7609.61	8126.47	
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	EVTDLLR	EVTDLLR	2	EVTDLLR2	329723	329285	318897
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	EVTDTQMPLVAPVILPEMYK	EVTDTQMPLVAPVILPEMYK	3	EVTDTQMPLVAPVILPEMYK3	11429.3	17806.8	16019.3
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	EVTEASAGVYTLALWNSAAGLR	EVTEASAGVYTLALWNSAAGLR	3	EVTEASAGVYTLALWNSAAGLR3	59333.9	51848.3	60560.8
D4AE56	D4AE56	D4AE56_RAT	Ptges2	Prostaglandin E synthase 2	1	EVTEFGNK	EVTEFGNK	2	EVTEFGNK2	7350.9	8107.72	4034.15
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	EVTEKEEVTLHLLPGEQLLCEASTVLK	EVTEKEEVTLHLLPGEQLLC(UniMod:4)EASTVLK	4	EVTEKEEVTLHLLPGEQLLC(UniMod:4)EASTVLK4	7104.01	9082.87	11143.5
D3ZHR2	D3ZHR2	ABCD1_RAT	Abcd1	ATP-binding cassette sub-family D member 1	1	EVTELAGYTAR	EVTELAGYTAR	2	EVTELAGYTAR2	15772.5	18950.6	13567.9
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	EVTFHCLEGYVLQGTPK	EVTFHC(UniMod:4)LEGYVLQGTPK	3	EVTFHC(UniMod:4)LEGYVLQGTPK3	19436.6	26952.3	17542.5
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	EVTFLDSK	EVTFLDSK	1	EVTFLDSK1	1908.62	3737.29	
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	EVTFLDSK	EVTFLDSK	2	EVTFLDSK2	379671	376322	396100
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	EVTFLDSKK	EVTFLDSKK	2	EVTFLDSKK2	28379.9	29345.6	26875.2
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	EVTGGAVSSEK	EVTGGAVSSEK	2	EVTGGAVSSEK2	27812.5	25594.3	24536.2
Q63186	Q63186	EI2BD_RAT	Eif2b4	Translation initiation factor eIF-2B subunit delta	1	EVTGMSSSK	EVTGMSSSK	2	EVTGMSSSK2	22494.5	17641.3	25238
Q03343	Q04400;Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	0	EVTGVNVNMR	EVTGVNVNMR	2	EVTGVNVNMR2	77786	83930.6	81874.5
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	EVTHIQFTSWPDHGVPEDPHLLLK	EVTHIQFTSWPDHGVPEDPHLLLK	3	EVTHIQFTSWPDHGVPEDPHLLLK3	2541.38	1816.06	
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	EVTHIQFTSWPDHGVPEDPHLLLK	EVTHIQFTSWPDHGVPEDPHLLLK	4	EVTHIQFTSWPDHGVPEDPHLLLK4	81298.5	58003.7	82395.6
Q63377	A0A8I6AFS5;Q63377	AT1B3_RAT	Atp1b3	Sodium/potassium-transporting ATPase subunit beta-3	0	EVTIECQIDGTR	EVTIEC(UniMod:4)QIDGTR	2	EVTIEC(UniMod:4)QIDGTR2	26650	14492.8	11984.2
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	EVTILDLDPER	EVTILDLDPER	2	EVTILDLDPER2	7948.93	6407.76	3583.73
A0A8I5ZU41	A0A8I5ZU41	A0A8I5ZU41_RAT	Amy1	Alpha-amylase	1	EVTINSDSTCGNDWVCEHR	EVTINSDSTC(UniMod:4)GNDWVC(UniMod:4)EHR	3	EVTINSDSTC(UniMod:4)GNDWVC(UniMod:4)EHR3	3853.79	9262.04	11121.9
F1LRL4	F1LRL4;A0A8I5ZNC8	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	0	EVTIVEK	EVTIVEK	2	EVTIVEK2	95246	102665	103700
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	EVTLAQR	EVTLAQR	2	EVTLAQR2	79647.1	68355.5	72931.5
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	EVTLDLSQFHAVAVR	EVTLDLSQFHAVAVR	2	EVTLDLSQFHAVAVR2		1604.19	4035.1
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	EVTLDLSQFHAVAVR	EVTLDLSQFHAVAVR	3	EVTLDLSQFHAVAVR3	34963.2	29621	30034.7
E9PSY0	E9PSY0	E9PSY0_RAT	Axl	receptor protein-tyrosine kinase	1	EVTLELR	EVTLELR	2	EVTLELR2	30299	23564.8	23088.2
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	EVTLIEELNCAGPAK	EVTLIEELNC(UniMod:4)AGPAK	2	EVTLIEELNC(UniMod:4)AGPAK2	34960.9	36165.6	41608
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	EVTLIEELNCAGPAK	EVTLIEELNC(UniMod:4)AGPAK	3	EVTLIEELNC(UniMod:4)AGPAK3	10100.9	10141.5	8548.44
D3ZRB3	D3ZRB3	D3ZRB3_RAT	Rhof	Ras homolog family member F, filopodia associated	1	EVTLNLYDTAGQEDYDR	EVTLNLYDTAGQEDYDR	3	EVTLNLYDTAGQEDYDR3	6782.42	6862.78	5557.4
G3V9L1	G3V9L1	G3V9L1_RAT	Tex2	Testis expressed 2	1	EVTLVHVTEWIEK	EVTLVHVTEWIEK	3	EVTLVHVTEWIEK3	6360.48	5124.15	6368.97
P51583	P51583;A0A0G2K5S4	PUR6_RAT	Paics	Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase	0	EVTPEGLQMVK	EVTPEGLQMVK	2	EVTPEGLQMVK2	78561	64216.9	59297.7
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	EVTPQYQLLVEVEDKGEPK	EVTPQYQLLVEVEDKGEPK	3	EVTPQYQLLVEVEDKGEPK3	4740.6	17471.9	7389.57
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	EVTPVDLPNCTLVK	EVTPVDLPNC(UniMod:4)TLVK	2	EVTPVDLPNC(UniMod:4)TLVK2	4003.57	9124.26	6617.87
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	EVTPVSSIPIETHR	EVTPVSSIPIETHR	3	EVTPVSSIPIETHR3	13455.4	7198.08	13808.4
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	EVTSDSGSIVVSGLTPGVEYTYTIQVLR	EVTSDSGSIVVSGLTPGVEYTYTIQVLR	4	EVTSDSGSIVVSGLTPGVEYTYTIQVLR4	86180.2	85680.6	47062.4
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	EVTSVVEQAWK	EVTSVVEQAWK	2	EVTSVVEQAWK2	2328.39		3300.7
P05544	P05544;P09005	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	EVTTPYVR	EVTTPYVR	2	EVTTPYVR2	629630	495651	578312
P05544	P05544;P09005	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	EVTTPYVRDEELSCSVLELK	EVTTPYVRDEELSC(UniMod:4)SVLELK	3	EVTTPYVRDEELSC(UniMod:4)SVLELK3	1.7105e+06		1.58415e+06
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	EVTTQDAVNPIESLDTWTESVEGK	EVTTQDAVNPIESLDTWTESVEGK	3	EVTTQDAVNPIESLDTWTESVEGK3	32687.5	30437.9	25003.1
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	EVTTVWEK	EVTTVWEK	2	EVTTVWEK2	22467.7	25807.2	34091.8
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	EVTVPGLEPSRK	EVTVPGLEPSRK	3	EVTVPGLEPSRK3	11008.1	10674.3	7379.11
Q9EPF2	Q9EPF2	MUC18_RAT	Mcam	Cell surface glycoprotein MUC18	1	EVTVPVLYPAEK	EVTVPVLYPAEK	2	EVTVPVLYPAEK2	70000	59019.8	48290.2
O35254	O35254	GORS1_RAT	Gorasp1	Golgi reassembly-stacking protein 1	1	EVTVTPNAAWGGEGSLGCGIGYGYLHR	EVTVTPNAAWGGEGSLGC(UniMod:4)GIGYGYLHR	3	EVTVTPNAAWGGEGSLGC(UniMod:4)GIGYGYLHR3	25335.8	20330.5	13982.6
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	EVTYELDHPGFQIR	EVTYELDHPGFQIR	3	EVTYELDHPGFQIR3	11040.1	10595.6	12746
Q4FZV0	Q4FZV0	MANBA_RAT	Manba	Beta-mannosidase	1	EVTYQVR	EVTYQVR	2	EVTYQVR2	40624.7	33184	28662.6
P01026	P01026	CO3_RAT	C3	Complement C3	1	EVVADSVWVDVK	EVVADSVWVDVK	2	EVVADSVWVDVK2	192391	182950	152617
P01026	P01026	CO3_RAT	C3	Complement C3	1	EVVADSVWVDVK	EVVADSVWVDVK	3	EVVADSVWVDVK3	27907.2	20963.9	12273.7
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	EVVAEEMAHR	EVVAEEMAHR	2	EVVAEEMAHR2	63922.6	52925	51630.8
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	EVVAEEMAHR	EVVAEEMAHR	3	EVVAEEMAHR3	624571	489985	498924
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EVVAGSHELGQDYEHVTMLQER	EVVAGSHELGQDYEHVTMLQER	3	EVVAGSHELGQDYEHVTMLQER3	82134.2	80931.1	78763.6
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EVVAGSHELGQDYEHVTMLQER	EVVAGSHELGQDYEHVTMLQER	4	EVVAGSHELGQDYEHVTMLQER4	411547	481962	474132
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	EVVCTHCPTGTAGK	EVVC(UniMod:4)THC(UniMod:4)PTGTAGK	2	EVVC(UniMod:4)THC(UniMod:4)PTGTAGK2	12559.7	5943.66	6613.98
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	EVVCTHCPTGTAGK	EVVC(UniMod:4)THC(UniMod:4)PTGTAGK	3	EVVC(UniMod:4)THC(UniMod:4)PTGTAGK3	190794	190060	136629
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	EVVDMSK	EVVDMSK	2	EVVDMSK2	49521.3	43849.5	70925.6
B2RYF7	B2RYF7	WASH1_RAT	Washc1	WASH complex subunit 1	1	EVVDPSSGR	EVVDPSSGR	2	EVVDPSSGR2	70443.5	60158.7	69486.9
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	EVVDSYLPVILDMIK	EVVDSYLPVILDMIK	2	EVVDSYLPVILDMIK2		26987.9	18370.2
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	EVVDSYLPVILDMIK	EVVDSYLPVILDMIK	3	EVVDSYLPVILDMIK3	8817.05		
Q5QJC9	Q5QJC9	BAG5_RAT	Bag5	BAG family molecular chaperone regulator 5	1	EVVEDINK	EVVEDINK	2	EVVEDINK2	28807.8	22947.1	15287.4
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	EVVELAQHYDNVR	EVVELAQHYDNVR	2	EVVELAQHYDNVR2	2304.82	3589.55	4707.21
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	EVVELAQHYDNVR	EVVELAQHYDNVR	3	EVVELAQHYDNVR3	121408	123807	143416
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	EVVENEQTAASELDEGK	EVVENEQTAASELDEGK	2	EVVENEQTAASELDEGK2	1524.5	4262.68	4149.91
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	EVVETPLLHPER	EVVETPLLHPER	2	EVVETPLLHPER2	13372.8	5235.14	9185.79
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	EVVETPLLHPER	EVVETPLLHPER	3	EVVETPLLHPER3	118128	92240.3	79799.7
P58751	P58751	RELN_RAT	Reln	Reelin	1	EVVHFGK	EVVHFGK	2	EVVHFGK2	19896.3	23167.4	
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	EVVHSVLDGQGVGWLNMK	EVVHSVLDGQGVGWLNMK	3	EVVHSVLDGQGVGWLNMK3	19105.4	15137.2	21624.1
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	EVVHTVSLHEIDVINSR	EVVHTVSLHEIDVINSR	3	EVVHTVSLHEIDVINSR3	10883	11688.5	10924.5
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	EVVHTVSLHEIDVINSR	EVVHTVSLHEIDVINSR	4	EVVHTVSLHEIDVINSR4	72366.3	64331.6	63831.1
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	EVVIAQK	EVVIAQK	2	EVVIAQK2	11538.1	13715.5	12055.4
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	EVVKEVVTSDDGSDCGDGMDLGLTHSFSGR	EVVKEVVTSDDGSDC(UniMod:4)GDGMDLGLTHSFSGR	4	EVVKEVVTSDDGSDC(UniMod:4)GDGMDLGLTHSFSGR4	1.55043e+06	1.40359e+06	1.63976e+06
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	EVVKPVPITSPAVSK	EVVKPVPITSPAVSK	2	EVVKPVPITSPAVSK2	4411.59	4484.89	
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	EVVKVSMMQTK	EVVKVSMMQTK	3	EVVKVSMMQTK3	4861.19	3437.65	3737.07
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	EVVLDAHTTQFK	EVVLDAHTTQFK	2	EVVLDAHTTQFK2	5404.17	854.869	5897.99
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	EVVLDAHTTQFK	EVVLDAHTTQFK	3	EVVLDAHTTQFK3	70573.2	73880.2	94464.6
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	EVVLELTK	EVVLELTK	2	EVVLELTK2	13769	20285	15664.3
O35370	O35370	O35370_RAT	Thbd	Thrombomodulin	1	EVVLQHVR	EVVLQHVR	2	EVVLQHVR2	4121.15	3046.61	6366.52
Q9WTT7	Q9WTT7	5MP1_RAT	Bzw2	eIF5-mimic protein 1	1	EVVLYVK	EVVLYVK	2	EVVLYVK2	47969.3	57142.3	26000.5
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	EVVNIQTWINKPDIK	EVVNIQTWINKPDIK	2	EVVNIQTWINKPDIK2	3554.97	6129.49	2257.21
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	EVVNIQTWINKPDIK	EVVNIQTWINKPDIK	3	EVVNIQTWINKPDIK3	13364.5	25411.1	22126.9
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	EVVNIVK	EVVNIVK	2	EVVNIVK2	13103.6	11094.7	9850.12
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	EVVNQPFPFGDKEK	EVVNQPFPFGDKEK	3	EVVNQPFPFGDKEK3	6536.77		
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	EVVPEVSR	EVVPEVSR	2	EVVPEVSR2	145126	145260	149510
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	EVVPRPR	EVVPRPR	2	EVVPRPR2	827223	846871	769966
B0BNA5	B0BNA5	COTL1_RAT	Cotl1	Coactosin-like protein	1	EVVQNFAK	EVVQNFAK	1	EVVQNFAK1	4218.82	3188.96	2532.21
B0BNA5	B0BNA5	COTL1_RAT	Cotl1	Coactosin-like protein	1	EVVQNFAK	EVVQNFAK	2	EVVQNFAK2	885883	774795	824872
D3ZU48	D3ZU48	D3ZU48_RAT	Klhdc4	Kelch domain containing 4	1	EVVSEDGTVITIK	EVVSEDGTVITIK	2	EVVSEDGTVITIK2	12798.7	12872.1	9979.92
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	EVVSLTEECCAEGADPNCYDTR	EVVSLTEEC(UniMod:4)C(UniMod:4)AEGADPNC(UniMod:4)YDTR	3	EVVSLTEEC(UniMod:4)C(UniMod:4)AEGADPNC(UniMod:4)YDTR3	111238	77487.6	85788.5
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	EVVTEHLINK	EVVTEHLINK	3	EVVTEHLINK3	25010.9	21094.5	14265.8
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	EVVTSDDGSDCGDGMDLGLTHSFSGR	EVVTSDDGSDC(UniMod:4)GDGMDLGLTHSFSGR	3	EVVTSDDGSDC(UniMod:4)GDGMDLGLTHSFSGR3	65133.9	62069	56567.4
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	EVVTSDDGSDCGDGMDLGLTHSFSGR	EVVTSDDGSDC(UniMod:4)GDGMDLGLTHSFSGR	4	EVVTSDDGSDC(UniMod:4)GDGMDLGLTHSFSGR4	119034	108193	103350
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	EVVVTGIQTQGAK	EVVVTGIQTQGAK	2	EVVVTGIQTQGAK2	265656	277033	271409
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	EVVVTGIQTQGAK	EVVVTGIQTQGAK	3	EVVVTGIQTQGAK3	72211.5	82551.1	77455.6
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	EVVVTLMK	EVVVTLMK	2	EVVVTLMK2	34028.9	27409.5	27001.5
Q920A6	Q920A6	RISC_RAT	Scpep1	Retinoid-inducible serine carboxypeptidase	1	EVWDYVTVR	EVWDYVTVR	2	EVWDYVTVR2	27853.2	23054.3	26533.8
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	EVWEELDGLDPNR	EVWEELDGLDPNR	2	EVWEELDGLDPNR2	30820.1	21241.7	20111.1
O35763	O35763	MOES_RAT	Msn	Moesin	1	EVWFFGLQYQDTK	EVWFFGLQYQDTK	2	EVWFFGLQYQDTK2	59803.8	51796.1	48693.9
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	EVWNTYELDLVNYQNK	EVWNTYELDLVNYQNK	3	EVWNTYELDLVNYQNK3	31936.5	38413.3	34118.6
D3ZFJ6	D3ZFJ6	D3ZFJ6_RAT	Lactb	Lactamase, beta	1	EVWSEGLGYADVENR	EVWSEGLGYADVENR	2	EVWSEGLGYADVENR2	5984.72	1204.2	
D3ZFJ6	D3ZFJ6	D3ZFJ6_RAT	Lactb	Lactamase, beta	1	EVWSEGLGYADVENRVPCKPETVMR	EVWSEGLGYADVENRVPC(UniMod:4)KPETVMR	4	EVWSEGLGYADVENRVPC(UniMod:4)KPETVMR4	1531.68		16082.8
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	EVYAVDPYNPAS	EVYAVDPYNPAS	2	EVYAVDPYNPAS2	23221.7	12949.2	15106.8
P58751	P58751	RELN_RAT	Reln	Reelin	1	EVYAVTHDLTPTENWIMQFK	EVYAVTHDLTPTENWIMQFK	3	EVYAVTHDLTPTENWIMQFK3	13226.2	22275.5	18239.6
P60123	A0A0G2K0H9;P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	0	EVYEGEVTELTPCETENPMGGYGK	EVYEGEVTELTPC(UniMod:4)ETENPMGGYGK	3	EVYEGEVTELTPC(UniMod:4)ETENPMGGYGK3	30969.2	22593.8	35951.9
Q792I0	Q792I0	LIN7C_RAT	Lin7c	Protein lin-7 homolog C	1	EVYEHVYETVDISSSPEVR	EVYEHVYETVDISSSPEVR	3	EVYEHVYETVDISSSPEVR3	4617.34	2652.46	3248.02
P51583	P51583	PUR6_RAT	Paics	Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase	1	EVYELLDSPGR	EVYELLDSPGR	2	EVYELLDSPGR2	53580.4	48674.8	60279.1
D3ZT64	D3ZT64	D3ZT64_RAT	Atg2a	Autophagy related 2A	1	EVYESIYNR	EVYESIYNR	2	EVYESIYNR2	16261.3	18036.3	9568.37
B1H282	B1H282	B1H282_RAT	Colgalt1	Collagen beta(1-O)galactosyltransferase 1	1	EVYGFLPVPLR	EVYGFLPVPLR	2	EVYGFLPVPLR2	7054.85	5125.32	6269.27
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	EVYGFNPEGK	EVYGFNPEGK	2	EVYGFNPEGK2	2.17147e+06	2.70868e+06	2.79649e+06
Q0Z843	Q0Z843	Q0Z843_RAT	Fig4	FIG4 phosphoinositide 5-phosphatase	1	EVYGVSLSR	EVYGVSLSR	2	EVYGVSLSR2	10010.2	16722.1	15427.1
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	EVYHFTLEK	EVYHFTLEK	2	EVYHFTLEK2	15534.9	8484.84	13649.8
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	EVYHFTLEK	EVYHFTLEK	3	EVYHFTLEK3	178520	163294	157460
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	EVYLDRK	EVYLDRK	2	EVYLDRK2	12184.1	12784.5	10170.6
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	EVYLFER	EVYLFER	2	EVYLFER2	42799.5	28902.4	49279.5
P80386	P80386	AAKB1_RAT	Prkab1	5'-AMP-activated protein kinase subunit beta-1	1	EVYLSGSFNNWSK	EVYLSGSFNNWSK	2	EVYLSGSFNNWSK2	25397.1	17646.5	18916.3
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	EVYMGNVIQGGEGQAPTR	EVYMGNVIQGGEGQAPTR	2	EVYMGNVIQGGEGQAPTR2	202347	158634	177351
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	EVYMGNVIQGGEGQAPTR	EVYMGNVIQGGEGQAPTR	3	EVYMGNVIQGGEGQAPTR3	76668.4	83354.3	103600
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	EVYPHVSTIINICLK	EVYPHVSTIINIC(UniMod:4)LK	3	EVYPHVSTIINIC(UniMod:4)LK3	6473.7		4230.62
Q80Z29	Q80Z29	NAMPT_RAT	Nampt	Nicotinamide phosphoribosyltransferase	1	EVYREHFQDDVFNER	EVYREHFQDDVFNER	3	EVYREHFQDDVFNER3		2308.97	
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	EVYSWGCGEYGR	EVYSWGC(UniMod:4)GEYGR	2	EVYSWGC(UniMod:4)GEYGR2	9740.26	16244.4	13705.7
P08753	P08753	GNAI3_RAT	Gnai3	Guanine nucleotide-binding protein G(i) subunit alpha-3	1	EVYTHFTCATDTK	EVYTHFTC(UniMod:4)ATDTK	2	EVYTHFTC(UniMod:4)ATDTK2	10134.5	9532.6	8322.91
P08753	P08753	GNAI3_RAT	Gnai3	Guanine nucleotide-binding protein G(i) subunit alpha-3	1	EVYTHFTCATDTK	EVYTHFTC(UniMod:4)ATDTK	3	EVYTHFTC(UniMod:4)ATDTK3	73318.3	94359.4	83227.3
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	EVYVPHTVYR	EVYVPHTVYR	2	EVYVPHTVYR2	38015.6	18480.4	14249.5
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	EVYVPHTVYR	EVYVPHTVYR	3	EVYVPHTVYR3	89548.9	93578.1	115910
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	EWAALGNMSK	EWAALGNMSK	2	EWAALGNMSK2	164177	167929	142496
Q3B7U1	Q3B7U1	Q3B7U1_RAT	Maged2	MAGE family member D2	1	EWAAQYR	EWAAQYR	2	EWAAQYR2	43590.8	54336.9	47726
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	EWAHATIIPK	EWAHATIIPK	2	EWAHATIIPK2	26181.3	19222.7	18644.6
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	EWAHATIIPK	EWAHATIIPK	3	EWAHATIIPK3	256106	269955	239923
A0A8I6AD03	A0A8I6AD03	A0A8I6AD03_RAT	Aplp1	Amyloid beta precursor like protein 1	1	EWAMADSQSK	EWAMADSQSK	2	EWAMADSQSK2	20379	31391.2	40752.5
P22734	P22734	COMT_RAT	Comt	Catechol O-methyltransferase	1	EWAMNVGDAK	EWAMNVGDAK	2	EWAMNVGDAK2	77920.8	72180.3	72901.2
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	EWCFKPCEIR	EWC(UniMod:4)FKPC(UniMod:4)EIR	2	EWC(UniMod:4)FKPC(UniMod:4)EIR2		9653.21	2092.32
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	EWCFKPCEIR	EWC(UniMod:4)FKPC(UniMod:4)EIR	3	EWC(UniMod:4)FKPC(UniMod:4)EIR3	105725	99720.4	134772
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	EWCMTER	EWC(UniMod:4)MTER	2	EWC(UniMod:4)MTER2	15326.4	18568.2	15297.9
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	EWDLLNENIMLLSK	EWDLLNENIMLLSK	2	EWDLLNENIMLLSK2	21239.6	14001.6	13499.1
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	EWDLLNENIMLLSK	EWDLLNENIMLLSK	3	EWDLLNENIMLLSK3	2556.95		
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	EWDRDKEK	EWDRDKEK	2	EWDRDKEK2			25900.8
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	EWDVLENECR	EWDVLENEC(UniMod:4)R	2	EWDVLENEC(UniMod:4)R2	66476	55973.5	68935.2
P15943	P15943	APLP2_RAT	Aplp2	Amyloid beta precursor like protein 2	1	EWEEAELQAK	EWEEAELQAK	2	EWEEAELQAK2	6952.59	7534.88	11961.7
G3V6U9	G3V6U9	SETD3_RAT	Setd3	Actin-histidine N-methyltransferase	1	EWEEYTQIR	EWEEYTQIR	2	EWEEYTQIR2	20806.5	14666.3	9100.33
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	EWEGVWGGALEEER	EWEGVWGGALEEER	2	EWEGVWGGALEEER2	211483	213529	223122
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	EWEGVWGGALEEERDR	EWEGVWGGALEEERDR	3	EWEGVWGGALEEERDR3	275412	165192	202334
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	EWEGVWGGALEEERDRESLMLK	EWEGVWGGALEEERDRESLMLK	3	EWEGVWGGALEEERDRESLMLK3	106229	77839.5	98406
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	EWEGVWGGALEEERDRESLMLK	EWEGVWGGALEEERDRESLMLK	4	EWEGVWGGALEEERDRESLMLK4	159665	138601	157930
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	EWEITTR	EWEITTR	2	EWEITTR2	126571	125994	
Q5XIU9	Q5XIU9	PGRC2_RAT	Pgrmc2	Membrane-associated progesterone receptor component 2	1	EWEMQFK	EWEMQFK	2	EWEMQFK2	35374.6	31633.6	53949.3
Q5XI86	Q5XI86	Q5XI86_RAT	Ptrh2	aminoacyl-tRNA hydrolase	1	EWEYCGQPK	EWEYC(UniMod:4)GQPK	2	EWEYC(UniMod:4)GQPK2	17944.9	17026.2	17451
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	EWFATFLSVQHDGLVWPSEPSR	EWFATFLSVQHDGLVWPSEPSR	3	EWFATFLSVQHDGLVWPSEPSR3		5130.21	6806.74
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	EWFFLISK	EWFFLISK	2	EWFFLISK2	47876.2	63560	62662.3
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	EWFLQAAK	EWFLQAAK	2	EWFLQAAK2	48145.7	38191.2	56129
P45479	P45479	PPT1_RAT	Ppt1	Palmitoyl-protein thioesterase 1	1	EWFTAHIIPFLK	EWFTAHIIPFLK	3	EWFTAHIIPFLK3	4103.5	1093.34	
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	EWGAEALTSLIK	EWGAEALTSLIK	2	EWGAEALTSLIK2	9994.06	13892.5	9652.54
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	EWGDAVQYNPAIIK	EWGDAVQYNPAIIK	2	EWGDAVQYNPAIIK2	169803	154960	160294
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	EWGDAVQYNPAIIK	EWGDAVQYNPAIIK	3	EWGDAVQYNPAIIK3	18051.4	13886.2	19678.5
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	EWGHCFGIK	EWGHC(UniMod:4)FGIK	2	EWGHC(UniMod:4)FGIK2	3543.15	12084.4	2736.56
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	EWGHCFGIKEEDIDENLLF	EWGHC(UniMod:4)FGIKEEDIDENLLF	3	EWGHC(UniMod:4)FGIKEEDIDENLLF3	42069.2	48838.1	27699.7
A0A8I6ANA0	A0A8I6ANA0	A0A8I6ANA0_RAT	Mfsd8	Major facilitator superfamily domain containing 8	1	EWGMIETQEHYK	EWGMIETQEHYK	3	EWGMIETQEHYK3	9244.63	3012.64	
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	EWGSGSDTLR	EWGSGSDTLR	2	EWGSGSDTLR2	510479	604899	573037
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	EWHNLISEER	EWHNLISEER	2	EWHNLISEER2	5518.5	6227.01	3136.5
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	EWHNLISEER	EWHNLISEER	3	EWHNLISEER3	18847.9	16961.3	15740.2
B5DEL8	B5DEL8	B5DEL8_RAT	Ndufs5	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5	1	EWIECAHGIGATR	EWIEC(UniMod:4)AHGIGATR	2	EWIEC(UniMod:4)AHGIGATR2	3659.92		1754.78
B5DEL8	B5DEL8	B5DEL8_RAT	Ndufs5	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5	1	EWIECAHGIGATR	EWIEC(UniMod:4)AHGIGATR	3	EWIEC(UniMod:4)AHGIGATR3	26715	20169.6	30070.5
Q05511	Q05511	HEPS_RAT	Hpn	Serine protease hepsin	1	EWIFQAIK	EWIFQAIK	2	EWIFQAIK2	45873	40054.6	45648.1
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	EWIPRPPEK	EWIPRPPEK	3	EWIPRPPEK3	86355	49578	65952.8
Q9QWJ9	Q9QWJ9	NRP1_RAT	Nrp1	Neuropilin-1	1	EWIQVDLGLLR	EWIQVDLGLLR	2	EWIQVDLGLLR2	5214.43	6908.07	932.701
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	EWIVTGK	EWIVTGK	2	EWIVTGK2	62648	56593	59445.8
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	EWKPLEDR	EWKPLEDR	2	EWKPLEDR2	17528.6	8645.9	13538.2
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	EWLDKIEK	EWLDKIEK	2	EWLDKIEK2	12864.2	16742.9	13174.6
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	EWLEGEDLSEELK	EWLEGEDLSEELK	2	EWLEGEDLSEELK2	50028.7	49054.1	51987.2
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	EWLEGEDLSEELKK	EWLEGEDLSEELKK	3	EWLEGEDLSEELKK3	7272.09	20036.9	8126.94
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	EWLEILR	EWLEILR	2	EWLEILR2	15408.2	22582.9	21555.5
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	EWLFASR	EWLFASR	2	EWLFASR2	26427.1	26354.4	29026.9
Q3T1I9	Q3T1I9	RPAP1_RAT	Rpap1	RNA polymerase II-associated protein 1	1	EWLHMDTVELEK	EWLHMDTVELEK	3	EWLHMDTVELEK3	7995.68	5366.58	5027.39
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	EWLIVNR	EWLIVNR	2	EWLIVNR2	143586	156295	141793
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	EWLLAEETAATASAIEAMK	EWLLAEETAATASAIEAMK	3	EWLLAEETAATASAIEAMK3	2102.43	4255.6	2403.57
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	EWLLAEETAATASAIEAMKK	EWLLAEETAATASAIEAMKK	3	EWLLAEETAATASAIEAMKK3	19474.2	6366.07	8122.32
Q5XIN4	Q5XIN4	Q5XIN4_RAT	Mtmr9	Myotubularin related protein 9	1	EWLQAGHPFQQR	EWLQAGHPFQQR	2	EWLQAGHPFQQR2	4352.66	7249.32	9088
Q5XIN4	Q5XIN4	Q5XIN4_RAT	Mtmr9	Myotubularin related protein 9	1	EWLQAGHPFQQR	EWLQAGHPFQQR	3	EWLQAGHPFQQR3	85401.7	97799.8	83346.6
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	EWLQVDLGTQK	EWLQVDLGTQK	2	EWLQVDLGTQK2	58783.5	37685.5	38461.1
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	EWLTELFQQSK	EWLTELFQQSK	2	EWLTELFQQSK2	31054.8	30331.1	31503.9
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	EWNELIK	EWNELIK	2	EWNELIK2	16173.6	14997.3	14831.6
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	EWPYCSR	EWPYC(UniMod:4)SR	2	EWPYC(UniMod:4)SR2	46584.3	42493.1	48780.8
F1M1H0	F1M1H0	F1M1H0_RAT	Dera	deoxyribose-phosphate aldolase	1	EWQAAWLLK	EWQAAWLLK	2	EWQAAWLLK2	3318.44	3431.36	5833.54
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	EWQELDDAEK	EWQELDDAEK	2	EWQELDDAEK2	98674.7	110778	88001.9
B2RZ77	B2RZ77	B2RZ77_RAT	Dpt	Dermatopontin	1	EWQFYCCR	EWQFYC(UniMod:4)C(UniMod:4)R	2	EWQFYC(UniMod:4)C(UniMod:4)R2	390935	325610	353058
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	EWSEMINTHSAEEQEIR	EWSEMINTHSAEEQEIR	3	EWSEMINTHSAEEQEIR3	2345.84	4203.99	5363.77
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	EWSGLLEELAK	EWSGLLEELAK	2	EWSGLLEELAK2	158819	146041	135489
Q62848	Q62848	ARFG1_RAT	Arfgap1	ADP-ribosylation factor GTPase-activating protein 1	1	EWSLESSPAQNWTPPQPK	EWSLESSPAQNWTPPQPK	3	EWSLESSPAQNWTPPQPK3	43861.9	50652.4	62934.2
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	EWSLVLYGTSVQPYSPTNEFPK	EWSLVLYGTSVQPYSPTNEFPK	3	EWSLVLYGTSVQPYSPTNEFPK3	21863.7	27416.3	15245.5
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	EWTDGLFTHVLR	EWTDGLFTHVLR	2	EWTDGLFTHVLR2	41365.3	47917.5	32359.7
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	EWTDGLFTHVLR	EWTDGLFTHVLR	3	EWTDGLFTHVLR3	149833	192354	181677
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	EWTDSFR	EWTDSFR	2	EWTDSFR2	139190	126288	150018
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	EWTFIIENESK	EWTFIIENESK	2	EWTFIIENESK2	45751.7	40483.4	30724.1
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	EWTPLGK	EWTPLGK	1	EWTPLGK1	7302.71	3089.63	6684.1
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	EWTPLGK	EWTPLGK	2	EWTPLGK2	253216	294186	405414
D4ADT7	D4ADT7	D4ADT7_RAT	Nod1	Nucleotide-binding oligomerization domain containing 1	1	EWTSPGEATSR	EWTSPGEATSR	2	EWTSPGEATSR2	10240.5	8405.32	10376.8
D3ZJI7	D3ZJI7	D3ZJI7_RAT	Serpinb11	Serpin family B member 11	1	EWTSPSNMVER	EWTSPSNMVER	2	EWTSPSNMVER2	6717.24	7796.77	7883.95
P22273	P22273	IL6RA_RAT	Il6r	Interleukin-6 receptor subunit alpha	1	EWTTTGNTLVLR	EWTTTGNTLVLR	2	EWTTTGNTLVLR2	59495.6	63055.9	54204.6
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	EWVAPEK	EWVAPEK	2	EWVAPEK2	47793.6	98284.8	77330.3
P50503	P50503;A0A8I6GLD3	F10A1_RAT	St13	Hsc70-interacting protein	0	EWVESMGGK	EWVESMGGK	2	EWVESMGGK2	165625	184997	167018
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	EWVMGGHSFLDR	EWVMGGHSFLDR	2	EWVMGGHSFLDR2		5460.73	
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	EWVMGGHSFLDR	EWVMGGHSFLDR	3	EWVMGGHSFLDR3	25910.5	25867.4	25883.6
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	EWVNLYHSAAAGR	EWVNLYHSAAAGR	3	EWVNLYHSAAAGR3	7702.2	2849.32	7420.04
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	EWYFGNADKER	EWYFGNADKER	3	EWYFGNADKER3	21833	14845.3	25832.3
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	EWYMIISR	EWYMIISR	2	EWYMIISR2	5517.11		5923.94
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	EWYYGNVTR	EWYYGNVTR	2	EWYYGNVTR2	127645	118563	153204
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	EYAASLSAQSTPGTAVLR	EYAASLSAQSTPGTAVLR	2	EYAASLSAQSTPGTAVLR2	7548.78	8617.22	6907.76
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	EYACTAVDMISR	EYAC(UniMod:4)TAVDMISR	2	EYAC(UniMod:4)TAVDMISR2	117939	97217.2	126941
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	EYACTAVDMISR	EYAC(UniMod:4)TAVDMISR	3	EYAC(UniMod:4)TAVDMISR3	14870.2	39724.5	11997.9
B2RYG6	B2RYG6	OTUB1_RAT	Otub1	Ubiquitin thioesterase OTUB1	1	EYAEDDNIYQQK	EYAEDDNIYQQK	2	EYAEDDNIYQQK2	23832.8	18534	20655.6
A0A8J8Y4N8	A0A8J8Y4N8;A0A8I6AKR3	A0A8J8Y4N8_RAT	Ube2r2	Ubiquitin-conjugating enzyme E2R 2	0	EYAEIIR	EYAEIIR	2	EYAEIIR2	14476.2	12339.2	12323.9
Q6GQP4	Q6GQP4	RAB31_RAT	Rab31	Ras-related protein Rab-31	1	EYAESIGALVVETSAK	EYAESIGALVVETSAK	2	EYAESIGALVVETSAK2	18763.9	15154.1	19777.9
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	EYAGYLLYSER	EYAGYLLYSER	2	EYAGYLLYSER2	102845	135652	116623
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	EYAGYLLYSER	EYAGYLLYSER	3	EYAGYLLYSER3	9347.12	3720.29	6931.65
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	EYASHLER	EYASHLER	2	EYASHLER2	5420.8	6121.1	6244.97
P62944	P52303;P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	EYATEVDVDFVR	EYATEVDVDFVR	2	EYATEVDVDFVR2	35336.1	26580.2	25227.8
P62944	P52303;P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	EYATEVDVDFVRK	EYATEVDVDFVRK	3	EYATEVDVDFVRK3	16929.1	18409.8	15298.2
A0A8I6ALT5	A0A8I6ALT5	A0A8I6ALT5_RAT	Dok2	Docking protein 2	1	EYAVTIRPTEASER	EYAVTIRPTEASER	3	EYAVTIRPTEASER3	134735	74152.8	118138
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	EYCGVPGDGYEELTR	EYC(UniMod:4)GVPGDGYEELTR	2	EYC(UniMod:4)GVPGDGYEELTR2	3.11083e+06	3.28739e+06	526353
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	EYCGVPGDGYEELTR	EYC(UniMod:4)GVPGDGYEELTR	3	EYC(UniMod:4)GVPGDGYEELTR3	5.38457e+06	5.51343e+06	5.69319e+06
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	EYCGVPGDGYEELTRS	EYC(UniMod:4)GVPGDGYEELTRS	2	EYC(UniMod:4)GVPGDGYEELTRS2	242527	261899	395791
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	EYCGVPGDGYEELTRS	EYC(UniMod:4)GVPGDGYEELTRS	3	EYC(UniMod:4)GVPGDGYEELTRS3	5.13454e+06	5.93062e+06	6.41562e+06
Q5M7W7	Q5M7W7	SYPM_RAT	Pars2	Probable proline--tRNA ligase, mitochondrial	1	EYCLGPTHEEAVTALVASQK	EYC(UniMod:4)LGPTHEEAVTALVASQK	3	EYC(UniMod:4)LGPTHEEAVTALVASQK3	6669.21	9510.08	10016.2
Q9R0I8	O88377;Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	0	EYCPMVFR	EYC(UniMod:4)PMVFR	2	EYC(UniMod:4)PMVFR2	540662	557385	563809
O88370	O88370	PI42C_RAT	Pip4k2c	Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma	1	EYCPQVFR	EYC(UniMod:4)PQVFR	2	EYC(UniMod:4)PQVFR2	19533.4	17425.4	17408.6
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	EYDALVK	EYDALVK	2	EYDALVK2	46437.8	55774.2	46209.7
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	EYDDNGEGITIFR	EYDDNGEGITIFR	2	EYDDNGEGITIFR2	5092.89	7234.84	5657.23
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	EYDDNGEGITIFRPLHLANK	EYDDNGEGITIFRPLHLANK	3	EYDDNGEGITIFRPLHLANK3	54140.2	42367.7	55989.2
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	EYDDNGEGITIFRPLHLANK	EYDDNGEGITIFRPLHLANK	4	EYDDNGEGITIFRPLHLANK4	310069	265605	254052
Q6AY86	Q6AY86	VP26A_RAT	Vps26a	Vacuolar protein sorting-associated protein 26A	1	EYDLIVHQLATYPEVNNSIK	EYDLIVHQLATYPEVNNSIK	3	EYDLIVHQLATYPEVNNSIK3	13711.7	9921.09	12398.1
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	EYDPVAAR	EYDPVAAR	1	EYDPVAAR1	15818.1	15002.9	13613.5
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	EYDPVAAR	EYDPVAAR	2	EYDPVAAR2	1.2934e+06	1.34775e+06	1.37267e+06
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	EYDPVEAR	EYDPVEAR	2	EYDPVEAR2	1.28826e+06	1.29965e+06	1.48403e+06
Q6DGG0	M0RB67;Q6DGG0	PPID_RAT	Ppid	Peptidyl-prolyl cis-trans isomerase D	0	EYDQALADLKK	EYDQALADLKK	3	EYDQALADLKK3	13008.1	11967.6	13548.7
D3ZY71	D3ZY71	D3ZY71_RAT	Triap1	TP53 regulated inhibitor of apoptosis 1	1	EYDQCFNR	EYDQC(UniMod:4)FNR	2	EYDQC(UniMod:4)FNR2		1894.38	
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	EYDSISR	EYDSISR	2	EYDSISR2	348201	247526	295701
P70615	P70615	LMNB1_RAT	Lmnb1	Lamin-B1	1	EYEAALNSK	EYEAALNSK	2	EYEAALNSK2	2880.1		
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	EYEAAVEQLK	EYEAAVEQLK	2	EYEAAVEQLK2	13245.9	11260.1	11366.7
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	EYECILNQDLLEHVQK	EYEC(UniMod:4)ILNQDLLEHVQK	3	EYEC(UniMod:4)ILNQDLLEHVQK3	27915.7	13177.4	27203.2
P85515	P85515	ACTZ_RAT	Actr1a	Alpha-centractin	1	EYEEDGAR	EYEEDGAR	2	EYEEDGAR2			41463.4
Q63692	Q63692	CDC37_RAT	Cdc37	Hsp90 co-chaperone Cdc37	1	EYEEEERK	EYEEEERK	2	EYEEEERK2			1819.43
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	EYEEEFFQNSK	EYEEEFFQNSK	2	EYEEEFFQNSK2	3204.72	4708.02	
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	EYELFEFR	EYELFEFR	2	EYELFEFR2	17130.3	30717.8	35088
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	EYELLSDELNQK	EYELLSDELNQK	2	EYELLSDELNQK2	164635	159877	172030
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	EYELLSDELNQK	EYELLSDELNQK	3	EYELLSDELNQK3	2276.91	5993.94	
P11507	P18596;Q64578;P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	0	EYEPEMGK	EYEPEMGK	2	EYEPEMGK2	711762	729900	699819
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	EYEPYFKK	EYEPYFKK	2	EYEPYFKK2	94721.3	109902	94072
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	EYESIIAIQESELKK	EYESIIAIQESELKK	3	EYESIIAIQESELKK3	7768.23	14898.2	10416.8
A0A8I5ZPV1	A0A8I5ZPV1	A0A8I5ZPV1_RAT	Tbc1d22a	TBC1 domain family, member 22a	1	EYFAFIEHYYNSR	EYFAFIEHYYNSR	3	EYFAFIEHYYNSR3	5729.73	3762.42	7265.28
P24155	P24155	THOP1_RAT	Thop1	Thimet oligopeptidase	1	EYFPMQVVTR	EYFPMQVVTR	2	EYFPMQVVTR2	12200.5	7881.98	9666.4
Q68FR6	Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	1	EYFSWEGAFQHVGK	EYFSWEGAFQHVGK	2	EYFSWEGAFQHVGK2	105013	103519	95262.5
Q68FR6	Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	1	EYFSWEGAFQHVGK	EYFSWEGAFQHVGK	3	EYFSWEGAFQHVGK3	538024	552749	566173
Q68FR6	Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	1	EYFSWEGAFQHVGK	EYFSWEGAFQHVGK	4	EYFSWEGAFQHVGK4	21429.2	29164.4	30626
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	EYFTFPASK	EYFTFPASK	2	EYFTFPASK2	16930.6	20080.2	20634
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	EYFTSLTK	EYFTSLTK	2	EYFTSLTK2	32221.6	45901.5	37481.2
F1LNX8	F1LNX8	F1LNX8_RAT	Cmahp	Cytidine monophosphate-N-acetylneuraminic acid hydroxylase	1	EYFTWAGFK	EYFTWAGFK	2	EYFTWAGFK2		6158.9	2979.13
A8WCF8	A8WCF8	TPRGL_RAT	Tprg1l	Tumor protein p63-regulated gene 1-like protein	1	EYFVFRPGTIEQAVEEIR	EYFVFRPGTIEQAVEEIR	3	EYFVFRPGTIEQAVEEIR3	70649.6	59983.4	77492.2
P26342	P26342	TGBR3_RAT	Tgfbr3	Transforming growth factor beta receptor type 3	1	EYGAVTSFTELK	EYGAVTSFTELK	2	EYGAVTSFTELK2	9021.24	7674.57	3656.52
Q07803	Q07803	EFGM_RAT	Gfm1	Elongation factor G, mitochondrial	1	EYGCPCITGKPK	EYGC(UniMod:4)PC(UniMod:4)ITGKPK	3	EYGC(UniMod:4)PC(UniMod:4)ITGKPK3	7174.39	10841.2	2246.6
A0A8I5ZUD8	A0A8I5ZUD8	A0A8I5ZUD8_RAT	Slc30a9	Proton-coupled zinc antiporter SLC30A9, mitochondrial	1	EYGDFLGNTKPR	EYGDFLGNTKPR	3	EYGDFLGNTKPR3	7450.7	3059.01	7730.6
A0JN30	A0JN30	A0JN30_RAT	Cnpy2	Canopy FGF signaling regulator 2	1	EYGEQIDPSTHR	EYGEQIDPSTHR	2	EYGEQIDPSTHR2	3551.08	3159.44	2832.9
A0JN30	A0JN30	A0JN30_RAT	Cnpy2	Canopy FGF signaling regulator 2	1	EYGEQIDPSTHR	EYGEQIDPSTHR	3	EYGEQIDPSTHR3	46023.6	21229.7	30044.4
D4ADS4	D4ADS4	D4ADS4_RAT	Mgst3	Microsomal glutathione S-transferase 3	1	EYGFVLLTGAASFVMVLHLAINVGK	EYGFVLLTGAASFVMVLHLAINVGK	3	EYGFVLLTGAASFVMVLHLAINVGK3		2741.09	3686.58
G3V8S6	G3V8S6	G3V8S6_RAT	Hrc	Histidine rich calcium binding protein	1	EYGHQVQDHR	EYGHQVQDHR	3	EYGHQVQDHR3			3692.52
A0A8I5Y4X4	A0A8I5Y4X4	A0A8I5Y4X4_RAT	Nub1	Negative regulator of ubiquitin-like proteins 1	1	EYGIALPCLLDADR	EYGIALPC(UniMod:4)LLDADR	2	EYGIALPC(UniMod:4)LLDADR2	8475.03		
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	EYGMIYLGK	EYGMIYLGK	2	EYGMIYLGK2	150362	132943	149312
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	EYGPFCGK	EYGPFC(UniMod:4)GK	1	EYGPFC(UniMod:4)GK1	5541.86	7955.52	
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	EYGPFCGK	EYGPFC(UniMod:4)GK	2	EYGPFC(UniMod:4)GK2	221363	197303	183451
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	EYGSAICGAQR	EYGSAIC(UniMod:4)GAQR	2	EYGSAIC(UniMod:4)GAQR2	46952.5	49206.6	37127.1
D4A0G7	D4A0G7	D4A0G7_RAT	Rab37	RAB37, member RAS oncogene family	1	EYGVPFMETSAK	EYGVPFMETSAK	2	EYGVPFMETSAK2	299973	291387	326290
F7FJT3	F7FJT3	F7FJT3_RAT	Rad23a	UV excision repair protein RAD23	1	EYHIDEK	EYHIDEK	2	EYHIDEK2	4660.06	5069.85	2126.74
D3ZMV1	D3ZMV1	D3ZMV1_RAT	Sla2	Src-like-adaptor 2	1	EYHIPSVYVAK	EYHIPSVYVAK	2	EYHIPSVYVAK2	14300.7	10757.1	10581.1
D3ZMV1	D3ZMV1	D3ZMV1_RAT	Sla2	Src-like-adaptor 2	1	EYHIPSVYVAK	EYHIPSVYVAK	3	EYHIPSVYVAK3	38821.1	25873.4	37713.8
O35824	O35824	DNJA2_RAT	Dnaja2	DnaJ homolog subfamily A member 2	1	EYHPDKNPNAGDK	EYHPDKNPNAGDK	2	EYHPDKNPNAGDK2			5098.83
O35824	O35824	DNJA2_RAT	Dnaja2	DnaJ homolog subfamily A member 2	1	EYHPDKNPNAGDK	EYHPDKNPNAGDK	3	EYHPDKNPNAGDK3			4970.93
O35824	O35824	DNJA2_RAT	Dnaja2	DnaJ homolog subfamily A member 2	1	EYHPDKNPNAGDKFK	EYHPDKNPNAGDKFK	4	EYHPDKNPNAGDKFK4	6155.49	11832.8	5128.03
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	EYHTGKLVTSK	EYHTGKLVTSK	3	EYHTGKLVTSK3		15476	
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	EYHTLYQAVSSAK	EYHTLYQAVSSAK	3	EYHTLYQAVSSAK3	3097.21	4225.02	3546.79
Q62763	Q62762;Q62763;Q62761	KC1G3_RAT	Csnk1g3	Casein kinase I isoform gamma-3	0	EYIDPETK	EYIDPETK	2	EYIDPETK2	31781.9	29093.1	33707.7
Q62763	Q62762;Q62763;Q62761	KC1G3_RAT	Csnk1g3	Casein kinase I isoform gamma-3	0	EYIDPETKK	EYIDPETKK	2	EYIDPETKK2	5033.69	4662.95	5782.87
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	EYIDYEFSALK	EYIDYEFSALK	2	EYIDYEFSALK2			5783.35
D3ZUP5	D3ZUP5	D3ZUP5_RAT	Brk1	BRICK1 subunit of SCAR/WAVE actin nucleating complex	1	EYIEIITSSIK	EYIEIITSSIK	2	EYIEIITSSIK2	79258.6	63934.6	74262.5
D3ZUP5	D3ZUP5	D3ZUP5_RAT	Brk1	BRICK1 subunit of SCAR/WAVE actin nucleating complex	1	EYIEIITSSIKK	EYIEIITSSIKK	3	EYIEIITSSIKK3	17220.7	24705	16159.5
Q08406	Q08406	CNTFR_RAT	Cntfr	Ciliary neurotrophic factor receptor subunit alpha	1	EYIIQVAAK	EYIIQVAAK	2	EYIIQVAAK2	4745.21	7715.63	2712.03
A0A8I6ASK1	A0A8I6ASK1	A0A8I6ASK1_RAT	P4ha2	procollagen-proline 4-dioxygenase	1	EYILAEEAK	EYILAEEAK	2	EYILAEEAK2	21112.3	21160.8	20542
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	EYILWAAAK	EYILWAAAK	2	EYILWAAAK2	29573.2	23102.8	31393.3
A0A0G2JUF2	A0A0G2JUF2	A0A0G2JUF2_RAT	Snx30	Sorting nexin family member 30	1	EYILYSDSMK	EYILYSDSMK	2	EYILYSDSMK2	9260.34	10498.9	8695.89
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	EYINECDSDYHEER	EYINEC(UniMod:4)DSDYHEER	2	EYINEC(UniMod:4)DSDYHEER2	4130.54	7434.99	2028.57
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	EYINECDSDYHEER	EYINEC(UniMod:4)DSDYHEER	3	EYINEC(UniMod:4)DSDYHEER3	43868.3	45798.6	47474.7
Q32PX6	Q32PX6	Q32PX6_RAT	Rhog	Ras homolog family member G	1	EYIPTVFDNYSAQSAVDGR	EYIPTVFDNYSAQSAVDGR	3	EYIPTVFDNYSAQSAVDGR3	31386.2	33121	40282.8
Q8VHE9	Q8VHE9	RETST_RAT	Retsat	All-trans-retinol 13,14-reductase	1	EYIQGLK	EYIQGLK	2	EYIQGLK2	14653.3	26205.9	20927.8
P98166	P98166	VLDLR_RAT	Vldlr	Very low-density lipoprotein receptor	1	EYIQLVEQLR	EYIQLVEQLR	2	EYIQLVEQLR2	58821	56313.7	52299.8
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	EYISDDHER	EYISDDHER	3	EYISDDHER3	31004.8	21347	25483.8
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	EYITPAQISK	EYITPAQISK	2	EYITPAQISK2	78283.1	85650.3	90017.5
F1LZ05	F1LZ05	F1LZ05_RAT	Parp14	Poly [ADP-ribose] polymerase	1	EYIVTGGGLLK	EYIVTGGGLLK	2	EYIVTGGGLLK2	2864.05		2424.45
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	EYKDETFTK	EYKDETFTK	2	EYKDETFTK2	31315.2	25719.5	18825
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	EYKDETFTK	EYKDETFTK	3	EYKDETFTK3	367595	425886	396041
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	EYKDETFTKR	EYKDETFTKR	2	EYKDETFTKR2	5475.83	2885.14	3525.26
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	EYKDETFTKR	EYKDETFTKR	3	EYKDETFTKR3	37391.7	55732.3	51901.2
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	EYKPLIIYNAIDSLTR	EYKPLIIYNAIDSLTR	2	EYKPLIIYNAIDSLTR2	22193.6	26088.1	23969.1
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	EYKPLIIYNAIDSLTR	EYKPLIIYNAIDSLTR	3	EYKPLIIYNAIDSLTR3	135454	113212	138704
A0A0G2JZA7	A0A0G2JZA7	A0A0G2JZA7_RAT	Cemip2	hyaluronoglucosaminidase	1	EYLCLDNSAR	EYLC(UniMod:4)LDNSAR	2	EYLC(UniMod:4)LDNSAR2	3325.1	3747.51	2650.29
D3ZTC4	D3ZTC4	D3ZTC4_RAT	Ccdc88b	Coiled-coil domain containing 88B	1	EYLDQLNALR	EYLDQLNALR	2	EYLDQLNALR2	6495.53	6327.4	
A0A8I6AAD8	A0A8I6AAD8	A0A8I6AAD8_RAT	Snx4	Sorting nexin 4	1	EYLFYAEALR	EYLFYAEALR	2	EYLFYAEALR2	7012.51	8524.46	10621
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	EYLGAICSCTCFGGQR	EYLGAIC(UniMod:4)SC(UniMod:4)TC(UniMod:4)FGGQR	2	EYLGAIC(UniMod:4)SC(UniMod:4)TC(UniMod:4)FGGQR2	50494.8	45326.5	55975
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	EYLGAICSCTCFGGQR	EYLGAIC(UniMod:4)SC(UniMod:4)TC(UniMod:4)FGGQR	3	EYLGAIC(UniMod:4)SC(UniMod:4)TC(UniMod:4)FGGQR3	792051	918809	741426
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	EYLGAICSCTCFGGQRGWR	EYLGAIC(UniMod:4)SC(UniMod:4)TC(UniMod:4)FGGQRGWR	3	EYLGAIC(UniMod:4)SC(UniMod:4)TC(UniMod:4)FGGQRGWR3	6372.36	5643.9	6142.13
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	EYLGQVLRPHER	EYLGQVLRPHER	2	EYLGQVLRPHER2	2861.58	1215.59	
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	EYLGQVLRPHER	EYLGQVLRPHER	3	EYLGQVLRPHER3	230593	212964	183385
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	EYLIMGMDGVTSDLK	EYLIMGMDGVTSDLK	2	EYLIMGMDGVTSDLK2	634327	532983	575075
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	EYLIMGMDGVTSDLK	EYLIMGMDGVTSDLK	3	EYLIMGMDGVTSDLK3	440865	498946	528973
A0A8I5ZPY8	D3ZV29;A0A8I5ZPY8;F1M7T1;A0A8I5Y7M6	A0A8I5ZPY8_RAT	Ndufb4	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4	0	EYLLQYNDPK	EYLLQYNDPK	2	EYLLQYNDPK2	13562.9	20553.8	15094.9
Q9JID1	Q9JID1	PDCD4_RAT	Pdcd4	Programmed cell death protein 4	1	EYLLSGDMSEAEHCLK	EYLLSGDMSEAEHC(UniMod:4)LK	3	EYLLSGDMSEAEHC(UniMod:4)LK3	2689.15		4030.48
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	EYLPFLNTLK	EYLPFLNTLK	2	EYLPFLNTLK2	17706.3	16755.4	12693.7
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	EYLPFLNTLKK	EYLPFLNTLKK	3	EYLPFLNTLKK3	4241.68		7229.02
P00507	P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	1	EYLPIGGLADFCK	EYLPIGGLADFC(UniMod:4)K	2	EYLPIGGLADFC(UniMod:4)K2	22565.4	21614.4	18343.3
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	EYLQVDLR	EYLQVDLR	2	EYLQVDLR2	86397.1	86214.3	54521.7
Q9EQG6	Q9EQG6	KDIS_RAT	Kidins220	Kinase D-interacting substrate of 220 kDa	1	EYLSDALLDK	EYLSDALLDK	2	EYLSDALLDK2	3263.11		5049.37
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	EYLSMLADINGK	EYLSMLADINGK	2	EYLSMLADINGK2	211666	293703	297716
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	EYLTSHLEIR	EYLTSHLEIR	2	EYLTSHLEIR2	7318.44	11493.4	4655.7
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	EYLTSHLEIR	EYLTSHLEIR	3	EYLTSHLEIR3	133845	135909	127769
O54857	O54857	PTEN_RAT	Pten	Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN	1	EYLVLTLTK	EYLVLTLTK	2	EYLVLTLTK2	8177.93	6242.32	6083.91
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	EYLVTLAK	EYLVTLAK	2	EYLVTLAK2	20229.6	17755.7	18163.8
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	EYLVTVVAK	EYLVTVVAK	2	EYLVTVVAK2	102638	102208	108752
Q32PY2	Q32PY2	LIPH_RAT	Liph	Lipase member H	1	EYLWDRDPPMTK	EYLWDRDPPMTK	3	EYLWDRDPPMTK3	13558	17640.5	9562.13
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	EYLWSPSAAR	EYLWSPSAAR	2	EYLWSPSAAR2	192275	203083	215138
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	EYLYVYK	EYLYVYK	2	EYLYVYK2	56110.3	53312.3	66112.9
Q923G5	Q923G5	ZDHC7_RAT	Zdhhc7	Palmitoyltransferase ZDHHC7	1	EYMESLQLKPGEVIYK	EYMESLQLKPGEVIYK	3	EYMESLQLKPGEVIYK3	9454.86	7087.56	14319.6
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	EYMGLAIK	EYMGLAIK	2	EYMGLAIK2	4553.89	4333.96	
P52020	P52020	ERG1_RAT	Sqle	Squalene monooxygenase	1	EYMTEQIYPQIPDHLK	EYMTEQIYPQIPDHLK	3	EYMTEQIYPQIPDHLK3	9058.88	2932.82	3008.98
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	EYMTLSLPEVSFADSAWHSVAIVHVPGR	EYMTLSLPEVSFADSAWHSVAIVHVPGR	4	EYMTLSLPEVSFADSAWHSVAIVHVPGR4	11589.5	4793.52	8381.18
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	EYNEFAEVFLK	EYNEFAEVFLK	2	EYNEFAEVFLK2	27689.5	31160.2	23554.8
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	EYNIGVLR	EYNIGVLR	2	EYNIGVLR2	140956	163160	146037
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	EYNLNFSGSSTVQEVK	EYNLNFSGSSTVQEVK	2	EYNLNFSGSSTVQEVK2	14118.8	8735.78	9061.78
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	EYNLNFSGSSTVQEVKR	EYNLNFSGSSTVQEVKR	3	EYNLNFSGSSTVQEVKR3	3524.15		4611.08
Q6P777	Q6P777	MB12A_RAT	Mvb12a	Multivesicular body subunit 12A	1	EYNYGFVVEK	EYNYGFVVEK	2	EYNYGFVVEK2	6984.28		
A0A8I5ZN47	A0A8I5ZN47	A0A8I5ZN47_RAT	Mtrex	Mtr4 exosome RNA helicase	1	EYPFILDAFQR	EYPFILDAFQR	2	EYPFILDAFQR2	17317.1	14745.1	16742.8
A0A8I5ZRG3	A0A8I5ZRG3	A0A8I5ZRG3_RAT	Frmd4b	FERM domain containing 4B	1	EYPLNIGEKPPQVR	EYPLNIGEKPPQVR	3	EYPLNIGEKPPQVR3	54259.4	59539.7	55293
A0A8I6AK45	A0A8I6AK45	A0A8I6AK45_RAT	Mtch2	Mitochondrial carrier 2	1	EYPSSFDR	EYPSSFDR	2	EYPSSFDR2	164443	203466	206618
F7F5Q9	F7F5Q9	F7F5Q9_RAT	Hcls1	Hematopoietic cell specific Lyn substrate 1	1	EYPVPSLPTR	EYPVPSLPTR	2	EYPVPSLPTR2	465935	410160	448284
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	EYQAGDFEAAER	EYQAGDFEAAER	2	EYQAGDFEAAER2	7117.13	5077.34	6589.18
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	EYQDAFLFNELK	EYQDAFLFNELK	2	EYQDAFLFNELK2	48026.7	40950.3	52891.8
P31000	P12839;P23565;P19527;P16884;P48675;P31000	VIME_RAT	Vim	Vimentin	0	EYQDLLNVK	EYQDLLNVK	2	EYQDLLNVK2	27761.6	19153.4	17478
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	EYQDLLTPLLHQTTEGYPVVPK	EYQDLLTPLLHQTTEGYPVVPK	3	EYQDLLTPLLHQTTEGYPVVPK3	3683.53	4078.01	2020.04
Q6P6Q2	Q6P6Q2	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	1	EYQELMNTK	EYQELMNTK	2	EYQELMNTK2	71759.4	58067.3	54800.1
Q10758	A0A0G2JVA8;Q6IFZ5;Q10758;Q6IG05	K2C8_RAT	Krt8	Keratin, type II cytoskeletal 8	0	EYQELMNVK	EYQELMNVK	2	EYQELMNVK2	27152.3	25165.6	28647.2
Q8R3Z7	Q8R3Z7	Q8R3Z7_RAT	Ehd4	EH-domain containing 4	1	EYQISAGDFPEVK	EYQISAGDFPEVK	2	EYQISAGDFPEVK2	47925.4	53608.2	44450.2
Q8R3Z7	Q8R3Z7	Q8R3Z7_RAT	Ehd4	EH-domain containing 4	1	EYQISAGDFPEVK	EYQISAGDFPEVK	3	EYQISAGDFPEVK3		2834.45	
P04897	P04897	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	1	EYQLNDSAAYYLNDLER	EYQLNDSAAYYLNDLER	3	EYQLNDSAAYYLNDLER3	152939	149466	179620
P82471	P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	1	EYQLSDSTK	EYQLSDSTK	2	EYQLSDSTK2	274327	278113	307306
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	EYQNDNQASWVHR	EYQNDNQASWVHR	3	EYQNDNQASWVHR3	21879.2	7510.31	16331.2
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	EYQPHVIVSTTGPNPFNTLTDR	EYQPHVIVSTTGPNPFNTLTDR	3	EYQPHVIVSTTGPNPFNTLTDR3	166997	141929	143134
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	EYQPHVIVSTTGPNPFNTLTDRELEEYR	EYQPHVIVSTTGPNPFNTLTDRELEEYR	4	EYQPHVIVSTTGPNPFNTLTDRELEEYR4	16715.9	11331.8	19335.4
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	EYQPHVIVSTTGPNPFNTLTDRELEEYRR	EYQPHVIVSTTGPNPFNTLTDRELEEYRR	4	EYQPHVIVSTTGPNPFNTLTDRELEEYRR4	19179.9	27227.4	13876.9
Q4V884	Q4V884	Q4V884_RAT	Cdc16	CDC16 cell division cycle 16 homolog (S. cerevisiae)	1	EYQQALDILDMEEPINRR	EYQQALDILDMEEPINRR	3	EYQQALDILDMEEPINRR3	9404.13	5557.35	13323.2
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	EYQQELK	EYQQELK	2	EYQQELK2	28281.8	22041.8	15358
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	EYQQELKK	EYQQELKK	2	EYQQELKK2	5928.1	9781.61	5106.77
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	EYQTQLIQR	EYQTQLIQR	2	EYQTQLIQR2	107967	126117	108720
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	EYQVENIVDTLCANMR	EYQVENIVDTLC(UniMod:4)ANMR	2	EYQVENIVDTLC(UniMod:4)ANMR2	6255.1	3953.22	6960.93
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	EYQVENIVDTLCANMR	EYQVENIVDTLC(UniMod:4)ANMR	3	EYQVENIVDTLC(UniMod:4)ANMR3	3605.97	4554.02	
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	EYQVETIVDTLCTNMLSDKEQLR	EYQVETIVDTLC(UniMod:4)TNMLSDKEQLR	3	EYQVETIVDTLC(UniMod:4)TNMLSDKEQLR3	134931	120326	103211
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	EYQVETIVDTLCTNMLSDKEQLR	EYQVETIVDTLC(UniMod:4)TNMLSDKEQLR	4	EYQVETIVDTLC(UniMod:4)TNMLSDKEQLR4		5911.36	
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	EYRDVDK	EYRDVDK	2	EYRDVDK2			12006
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	EYRDVDKK	EYRDVDKK	2	EYRDVDKK2			8876.38
P08649	P08649	CO4_RAT	C4	Complement C4	1	EYRNGDSMK	EYRNGDSMK	2	EYRNGDSMK2			6167.03
A0A8I6ATM7	A0A8I6ATM7	A0A8I6ATM7_RAT	Gpn1	GPN-loop GTPase	1	EYRPEYER	EYRPEYER	3	EYRPEYER3	17943.4		20285.9
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	EYSAEISEAIR	EYSAEISEAIR	2	EYSAEISEAIR2	22631.1	19975.9	15302.6
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	EYSALSNMPVEK	EYSALSNMPVEK	2	EYSALSNMPVEK2	30331.5	21825.7	26023.1
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	EYSLQVLR	EYSLQVLR	2	EYSLQVLR2	48956	39958	66541
P70569	P70569	MYO5B_RAT	Myo5b	Unconventional myosin-Vb	1	EYSQLEQR	EYSQLEQR	2	EYSQLEQR2	11412.1	4004.93	5148.53
P33436	P33436	MMP2_RAT	Mmp2	72 kDa type IV collagenase	1	EYSSCTDTGR	EYSSC(UniMod:4)TDTGR	2	EYSSC(UniMod:4)TDTGR2			2215.84
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	EYSVLNAVDQAR	EYSVLNAVDQAR	2	EYSVLNAVDQAR2	125879	135159	122387
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	EYSVQSSAR	EYSVQSSAR	2	EYSVQSSAR2	208744	164037	121215
G3V9R2	Q5FVP9;G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	0	EYSYYCDNGFTTPSQSYWDYLR	EYSYYC(UniMod:4)DNGFTTPSQSYWDYLR	3	EYSYYC(UniMod:4)DNGFTTPSQSYWDYLR3	43834.5	32475.2	30959.4
Q5XIH7	Q5XIH7	PHB2_RAT	Phb2	Prohibitin-2	1	EYTAAVEAK	EYTAAVEAK	2	EYTAAVEAK2	302441	284866	283379
Q68FT7	Q68FT7	Q68FT7_RAT	Farsb	Phenylalanine--tRNA ligase beta subunit	1	EYTACELMNIYK	EYTAC(UniMod:4)ELMNIYK	2	EYTAC(UniMod:4)ELMNIYK2	4318.76	11815.3	5151.7
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	EYTDDSFTNR	EYTDDSFTNR	2	EYTDDSFTNR2	341280	205811	203277
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	EYTDDSFTNRK	EYTDDSFTNRK	2	EYTDDSFTNRK2	105034	72207.1	55108.1
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	EYTDDSFTNRK	EYTDDSFTNRK	3	EYTDDSFTNRK3	2.06831e+06	1.47991e+06	1.43275e+06
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	EYTDLEVSDK	EYTDLEVSDK	2	EYTDLEVSDK2	18325	18863.6	17911.7
Q3B7U1	Q3B7U1;Q9ES73	Q3B7U1_RAT	Maged2	MAGE family member D2	0	EYTDVYPEIIER	EYTDVYPEIIER	2	EYTDVYPEIIER2	43986.3	50692.3	46991.1
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	EYTESSPLEDK	EYTESSPLEDK	2	EYTESSPLEDK2	45332.2	45741.3	47271
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	EYTFTNLMPGR	EYTFTNLMPGR	2	EYTFTNLMPGR2	13214.1	16762	15255.9
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	EYTLDVYR	EYTLDVYR	2	EYTLDVYR2	14037.4	16661.1	20225.1
Q5RJQ4	Q5RJQ4	SIR2_RAT	Sirt2	NAD-dependent protein deacetylase sirtuin-2	1	EYTMSWMK	EYTMSWMK	2	EYTMSWMK2	13156.7	13067.2	11153.8
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	EYTNIFLK	EYTNIFLK	2	EYTNIFLK2	9.4282e+06	1.05452e+07	1.09191e+07
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	EYTSDDMNVAPEDR	EYTSDDMNVAPEDR	2	EYTSDDMNVAPEDR2	26389.9	28921.3	19061.4
Q4V8C7	Q4V8C7	PRKRA_RAT	Prkra	Interferon-inducible double-stranded RNA-dependent protein kinase activator A	1	EYTTICR	EYTTIC(UniMod:4)R	2	EYTTIC(UniMod:4)R2	5317.31	7089.17	7754.5
Q6AYF8	Q6AYF8	Q6AYF8_RAT	Serpinb9	Serpin family B member 9	1	EYTVDMPFK	EYTVDMPFK	2	EYTVDMPFK2	27653.1	21757.4	23072.2
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	EYVAAVLR	EYVAAVLR	2	EYVAAVLR2	11934	3787.7	7401.49
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	EYVCLLPDDVSK	EYVC(UniMod:4)LLPDDVSK	2	EYVC(UniMod:4)LLPDDVSK2	4081.67		
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	EYVESENGQMYIQK	EYVESENGQMYIQK	2	EYVESENGQMYIQK2	7089.15	2281.97	5227.9
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	EYVFSDSK	EYVFSDSK	2	EYVFSDSK2	43863.8	33966.7	30986.8
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	EYVFSDSKK	EYVFSDSKK	2	EYVFSDSKK2	7244.14	5936.39	7514.78
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	EYVFSVENFDALK	EYVFSVENFDALK	2	EYVFSVENFDALK2	41636.9	37790.9	35033.2
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	EYVFSVENFDALKDIQNQLK	EYVFSVENFDALKDIQNQLK	3	EYVFSVENFDALKDIQNQLK3	10954.6	9173	
Q64165	Q64165	Q64165_RAT	Gcnt1	Glucosaminyl (N-acetyl) transferase 1	1	EYVGYVLENK	EYVGYVLENK	2	EYVGYVLENK2	12289.5	10673.2	19510.6
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	EYVHLVCQMR	EYVHLVC(UniMod:4)QMR	3	EYVHLVC(UniMod:4)QMR3	4956.15	10095.1	5568.55
P01026	P01026	CO3_RAT	C3	Complement C3	1	EYVLPSFEVLVEPTEK	EYVLPSFEVLVEPTEK	2	EYVLPSFEVLVEPTEK2	1.11658e+06	983108	999633
P01026	P01026	CO3_RAT	C3	Complement C3	1	EYVLPSFEVLVEPTEK	EYVLPSFEVLVEPTEK	3	EYVLPSFEVLVEPTEK3	57563.8	49615	37833
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	EYVLYLR	EYVLYLR	2	EYVLYLR2	14620.8	9350.71	10185.8
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	EYVLYLRPTGPLAQK	EYVLYLRPTGPLAQK	2	EYVLYLRPTGPLAQK2		3295.98	3946.36
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	EYVLYLRPTGPLAQK	EYVLYLRPTGPLAQK	3	EYVLYLRPTGPLAQK3	604918	684513	620820
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	EYVNGSNLITK	EYVNGSNLITK	2	EYVNGSNLITK2	11144.2	13429.4	15121.8
O70601	O70601	LAT_RAT	Lat	Linker for activation of T-cells family member 1	1	EYVNVSQDAQPVIR	EYVNVSQDAQPVIR	2	EYVNVSQDAQPVIR2	55864.6	47350.5	51073.6
O70601	O70601	LAT_RAT	Lat	Linker for activation of T-cells family member 1	1	EYVNVSQDAQPVIR	EYVNVSQDAQPVIR	3	EYVNVSQDAQPVIR3	9324.28	13177.6	14254.5
Q5FVN1	Q5FVN1	STBD1_RAT	Stbd1	Starch-binding domain-containing protein 1	1	EYVPVGK	EYVPVGK	2	EYVPVGK2	28319.2	37565.6	33355.2
D3ZMI6	D3ZMI6	D3ZMI6_RAT	Olfm4	Olfactomedin 4	1	EYVQLISVYEK	EYVQLISVYEK	2	EYVQLISVYEK2	48122.5	58655.9	52237.7
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	EYVTCHTCR	EYVTC(UniMod:4)HTC(UniMod:4)R	2	EYVTC(UniMod:4)HTC(UniMod:4)R2	35262.6	42713.6	37489.7
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	EYVTCHTCR	EYVTC(UniMod:4)HTC(UniMod:4)R	3	EYVTC(UniMod:4)HTC(UniMod:4)R3	101097	129187	67811.1
Q63396	Q63396	TCP4_RAT	Sub1	Activated RNA polymerase II transcriptional coactivator p15	1	EYWMDSEGEMK	EYWMDSEGEMK	2	EYWMDSEGEMK2	2432.51	2955.08	3631.51
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	EYYEALPELK	EYYEALPELK	2	EYYEALPELK2	115338	104532	104861
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	EYYFAITMER	EYYFAITMER	2	EYYFAITMER2	10955.5	9395.86	12841.3
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	EYYGAGVDGDPAFR	EYYGAGVDGDPAFR	2	EYYGAGVDGDPAFR2	123973	128892	118442
A0A8I6GBD2	A0A8I6GBD2	A0A8I6GBD2_RAT	Actr10	Actin related protein 10	1	EYYNQTGR	EYYNQTGR	2	EYYNQTGR2	53422.9	52246.2	40657.7
A0A0G2JVT8	A0A8I6ARY9;A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	0	FAAACMNTR	FAAAC(UniMod:4)MNTR	2	FAAAC(UniMod:4)MNTR2	12014.2	11514.8	12422.6
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	FAAAHWTVALLPVVQGHFCK	FAAAHWTVALLPVVQGHFC(UniMod:4)K	4	FAAAHWTVALLPVVQGHFC(UniMod:4)K4	15149.1	4243.25	8954.38
P60570	P60570	PANX1_RAT	Panx1	Pannexin-1	1	FAAAPHLCSDLK	FAAAPHLC(UniMod:4)SDLK	3	FAAAPHLC(UniMod:4)SDLK3	29567.5	31903.8	20937.9
P38983	A0A8I5ZZE2;P38983	RSSA_RAT	Rpsa	Small ribosomal subunit protein uS2	0	FAAATGATPIAGR	FAAATGATPIAGR	2	FAAATGATPIAGR2	99004.1	77864.8	69336
D4A5G8	D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	FAAAYCR	FAAAYC(UniMod:4)R	2	FAAAYC(UniMod:4)R2	107725	118133	116744
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	FAADFAAEAASK	FAADFAAEAASK	2	FAADFAAEAASK2	117886	145129	171019
Q5BJP3	Q5BJP3	UFM1_RAT	Ufm1	Ubiquitin-fold modifier 1	1	FAAEEFK	FAAEEFK	2	FAAEEFK2	42822.1	49113	49028.4
Q9WVK7	Q9WVK7	HCDH_RAT	Hadh	Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial	1	FAAEHTIFASNTSSLQITNIANATTR	FAAEHTIFASNTSSLQITNIANATTR	3	FAAEHTIFASNTSSLQITNIANATTR3	7064.07	9221.14	14750.9
Q4KM45	Q4KM45	ADSSP_RAT	Adissp	Adipose-secreted signaling protein	1	FAAGHDAEGSQSHVHFDEK	FAAGHDAEGSQSHVHFDEK	4	FAAGHDAEGSQSHVHFDEK4	5067.92	3826.44	11101.6
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	FAAGSVVSFK	FAAGSVVSFK	2	FAAGSVVSFK2	35114.6	51450.3	46179.3
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	FAALEISLR	FAALEISLR	2	FAALEISLR2	16635.1	10039.6	14119.5
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	FAALEKPTTLELK	FAALEKPTTLELK	2	FAALEKPTTLELK2	9706.36	9279.88	11295.6
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	FAALEKPTTLELK	FAALEKPTTLELK	3	FAALEKPTTLELK3	111387	218846	194852
B2RYJ2	B2RYJ2	B2RYJ2_RAT	Dbr1	Debranching RNA lariats 1	1	FAALMQHQATDKEQAGK	FAALMQHQATDKEQAGK	4	FAALMQHQATDKEQAGK4	5611.43	4352.42	4475.28
G3V784	G3V784	G3V784_RAT	Adpgk	ADP-dependent glucokinase	1	FAANPDLK	FAANPDLK	2	FAANPDLK2	52061.6	51719.4	47247.5
D4A1R8	D4A1R8	CPNE1_RAT	Cpne1	Copine-1	1	FAAQAAQQR	FAAQAAQQR	2	FAAQAAQQR2	43482.5	34075.6	35882
D3ZD83	D3ZD83	D3ZD83_RAT	Mfsd10	Major facilitator superfamily domain containing 10	1	FAAVAHSQDPPTEDGLR	FAAVAHSQDPPTEDGLR	3	FAAVAHSQDPPTEDGLR3	19175.8	9032.94	15093.7
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	FAAYFQQGDMESNGK	FAAYFQQGDMESNGK	2	FAAYFQQGDMESNGK2	14019.7	16214.5	21178.2
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	FACYYPR	FAC(UniMod:4)YYPR	1	FAC(UniMod:4)YYPR1	46149.3	43035.7	48580.7
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	FACYYPR	FAC(UniMod:4)YYPR	2	FAC(UniMod:4)YYPR2	4.57703e+07	4.32233e+07	4.60773e+07
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	FACYYPRVEYGFQVK	FAC(UniMod:4)YYPRVEYGFQVK	3	FAC(UniMod:4)YYPRVEYGFQVK3	34068.4	55519.7	69639.9
A0A8I6AT07	M0R4Q5;A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	0	FADAFDHHK	FADAFDHHK	2	FADAFDHHK2	1338.24		
D3ZZ26	D3ZZ26	D3ZZ26_RAT	Ppp1r3d	Protein phosphatase 1, regulatory subunit 3D	1	FADALGLELAQVK	FADALGLELAQVK	2	FADALGLELAQVK2	643044	628446	578682
D3ZZ26	D3ZZ26	D3ZZ26_RAT	Ppp1r3d	Protein phosphatase 1, regulatory subunit 3D	1	FADALGLELAQVK	FADALGLELAQVK	3	FADALGLELAQVK3	41228.2	51173.3	53641.6
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	FADDELIIDFDNFVR	FADDELIIDFDNFVR	2	FADDELIIDFDNFVR2	14807.5	11543.8	11139.6
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	FADDELIIDFDNFVR	FADDELIIDFDNFVR	3	FADDELIIDFDNFVR3	6189.24	2813.24	6026.46
P10536	Q6NYB7;P10536	RAB1B_RAT	Rab1b	Ras-related protein Rab-1B	0	FADDTYTESYISTIGVDFK	FADDTYTESYISTIGVDFK	3	FADDTYTESYISTIGVDFK3	73807.5	88763.8	94119.6
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	FADEHVPGSPFTVK	FADEHVPGSPFTVK	3	FADEHVPGSPFTVK3	17362	15891.5	10706.5
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	FADFMVK	FADFMVK	2	FADFMVK2	60066.8	50765.5	57330.4
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	FADGDVDAVLSR	FADGDVDAVLSR	2	FADGDVDAVLSR2	10748	12115.7	11305.8
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	FADILSMADHLK	FADILSMADHLK	2	FADILSMADHLK2	31709	21778.5	43005.6
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	FADILSMADHLK	FADILSMADHLK	3	FADILSMADHLK3	21242.1	40921.2	42487.1
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	FADILSMADHLKK	FADILSMADHLKK	3	FADILSMADHLKK3	23008.1	15839.1	8243.18
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	FADKETLIQFLR	FADKETLIQFLR	3	FADKETLIQFLR3	14439.5	14206.8	17662.2
A0A8I5ZZN7	A0A8I5ZZN7	A0A8I5ZZN7_RAT	Tusc1	Tumor suppressor candidate 1	1	FADLAASHLEALR	FADLAASHLEALR	3	FADLAASHLEALR3	8164.08	6689.03	4825.23
P31000	P31000	VIME_RAT	Vim	Vimentin	1	FADLSEAANR	FADLSEAANR	2	FADLSEAANR2	40325.6	25722.6	27169.6
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	FADQDDIGNVSFDR	FADQDDIGNVSFDR	2	FADQDDIGNVSFDR2	189845	216932	161665
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	FADQHVPGSPFSVK	FADQHVPGSPFSVK	2	FADQHVPGSPFSVK2	91723.2	75080.6	72002
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	FADQHVPGSPFSVK	FADQHVPGSPFSVK	3	FADQHVPGSPFSVK3	964440	1.01038e+06	960840
A0A8I6G5Q1	A0A8I6G5Q1	A0A8I6G5Q1_RAT	Sema4d	Semaphorin 4D	1	FADSDADGD	FADSDADGD	1	FADSDADGD1	1991.47		3145.09
F1LW77	F1LW77	F1LW77_RAT	Rab33b	RAB33B, member RAS oncogene family	1	FADTHSMPLFETSAK	FADTHSMPLFETSAK	3	FADTHSMPLFETSAK3	14062.9	8759.59	13556.1
A0A8I5ZQ14	A0A8I5ZQ14	A0A8I5ZQ14_RAT	Afg3l1	AFG3(ATPase family gene 3)-like 1 (S. cerevisiae)	1	FADVAGCEEAK	FADVAGC(UniMod:4)EEAK	2	FADVAGC(UniMod:4)EEAK2	5660.25	7094.37	4021.98
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	FADVIVHR	FADVIVHR	2	FADVIVHR2	6145.81	8618.74	5431.1
Q9ES40	Q9ES40	PRAF3_RAT	Arl6ip5	PRA1 family protein 3	1	FADYISK	FADYISK	1	FADYISK1	16925.8	27671.2	25270.1
Q9ES40	Q9ES40	PRAF3_RAT	Arl6ip5	PRA1 family protein 3	1	FADYISK	FADYISK	2	FADYISK2	745124	808099	799984
A0A8I5ZNY0	A0A8I5ZNY0	A0A8I5ZNY0_RAT	Avl9	AVL9 cell migration associated	1	FADYLVR	FADYLVR	2	FADYLVR2	7958.93		6741.93
G3V6W5	G3V6W5	G3V6W5_RAT	Ifih1	RNA helicase	1	FADYQTNGEIICK	FADYQTNGEIIC(UniMod:4)K	2	FADYQTNGEIIC(UniMod:4)K2	2094.15	2081.76	1664.3
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	FAEAFEAIPR	FAEAFEAIPR	2	FAEAFEAIPR2	434454	392318	399843
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	FAEAFEAIPR	FAEAFEAIPR	3	FAEAFEAIPR3	3331.79	3354.38	3272.64
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	FAEALITFVSDNSVLHR	FAEALITFVSDNSVLHR	2	FAEALITFVSDNSVLHR2	18470.9	9149.04	6518.19
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	FAEALITFVSDNSVLHR	FAEALITFVSDNSVLHR	3	FAEALITFVSDNSVLHR3	48316.8	67004.2	80939.8
Q66H62	Q66H62	CYLD_RAT	Cyld	Ubiquitin carboxyl-terminal hydrolase CYLD	1	FAEAPSCLIIQMPR	FAEAPSC(UniMod:4)LIIQMPR	2	FAEAPSC(UniMod:4)LIIQMPR2	7078.71	3333.2	
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	FAEDHFAHEATK	FAEDHFAHEATK	3	FAEDHFAHEATK3	21300.2	15842.2	11983
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	FAEDLRR	FAEDLRR	2	FAEDLRR2	3.36088e+06	3.80512e+06	3.1275e+06
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	FAEEADVVIVGAGPAGLSAAIR	FAEEADVVIVGAGPAGLSAAIR	3	FAEEADVVIVGAGPAGLSAAIR3	4771.44		5068.82
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	FAEFDQIMK	FAEFDQIMK	2	FAEFDQIMK2	68306	66112.1	58675.9
A0A0G2QC33	A0A0G2QC33	ATG4B_RAT	Atg4b	Cysteine protease ATG4B	1	FAEFEDFPETSEPVWILGR	FAEFEDFPETSEPVWILGR	3	FAEFEDFPETSEPVWILGR3	28761.6	26819.5	27820.9
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	FAEGEATLR	FAEGEATLR	2	FAEGEATLR2	76433.6	82361.7	95348.7
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	FAEGLEK	FAEGLEK	1	FAEGLEK1	9052.32	8881.33	11079.1
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	FAEGLEK	FAEGLEK	2	FAEGLEK2	1.20508e+06	1.5259e+06	1.31029e+06
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	FAEHGETLAMK	FAEHGETLAMK	2	FAEHGETLAMK2	47558.6	52471.9	43313
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	FAEHGETLAMK	FAEHGETLAMK	3	FAEHGETLAMK3	28087.6	38049.2	30378.9
A0A8I6ABE7	A0A8I6ABE7	A0A8I6ABE7_RAT	Xpr1	Xenotropic and polytropic retrovirus receptor 1	1	FAEHLSAHITPEWR	FAEHLSAHITPEWR	4	FAEHLSAHITPEWR4	1292.32	3287.57	5904.46
P62749	P84076;Q5PQN0;P62749	HPCL1_RAT	Hpcal1	Hippocalcin-like protein 1	0	FAEHVFR	FAEHVFR	2	FAEHVFR2	7049	9036.01	7261.9
P51111	P51111	HD_RAT	Htt	Huntingtin	1	FAELAHLVRPQK	FAELAHLVRPQK	3	FAELAHLVRPQK3	56065.3	49975.8	40719.2
Q497B0	Q497B0	NIT2_RAT	Nit2	Omega-amidase NIT2	1	FAELAQIYAR	FAELAQIYAR	2	FAELAQIYAR2	50552.2	35439.1	37289.7
Q5U2N0	Q5U2N0	PYRG2_RAT	Ctps2	CTP synthase 2	1	FAELDIN	FAELDIN	1	FAELDIN1	5630.11	7402.82	7318.53
Q62985	Q62985	SH2B1_RAT	Sh2b1	SH2B adapter protein 1	1	FAELFLQHFEAEVAR	FAELFLQHFEAEVAR	3	FAELFLQHFEAEVAR3	2331.74		6668.94
Q6Q0N1	Q6Q0N1	CNDP2_RAT	Cndp2	Cytosolic non-specific dipeptidase	1	FAELQSPNK	FAELQSPNK	2	FAELQSPNK2	17106.3	8657.12	14010.4
A0A8I5YC59	A0A8I5YC59	A0A8I5YC59_RAT	Pcdh10	Protocadherin 10	1	FAELVLEKPLDR	FAELVLEKPLDR	3	FAELVLEKPLDR3	5674.22		2277.9
A0A0G2K8I5	A0A0G2K8I5	A0A0G2K8I5_RAT	Pcdh19	Protocadherin 19	1	FAELVVEK	FAELVVEK	2	FAELVVEK2	12005.4	8951.97	7038.29
Q4FZT2	Q4FZT2	PPME1_RAT	Ppme1	Protein phosphatase methylesterase 1	1	FAEPIGGFQCVFPGC	FAEPIGGFQC(UniMod:4)VFPGC(UniMod:4)	2	FAEPIGGFQC(UniMod:4)VFPGC(UniMod:4)2	7850.47		
Q5XIP2	Q5XIP2	Q5XIP2_RAT	Pigk	GPI-anchor transamidase	1	FAEQLPVAQIIHQKPK	FAEQLPVAQIIHQKPK	4	FAEQLPVAQIIHQKPK4	6825.32	4350.84	3732.2
P30427	P30427	PLEC_RAT	Plec	Plectin	1	FAEQTLR	FAEQTLR	2	FAEQTLR2	5621.99	8484.56	10544
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	FAERPALLELER	FAERPALLELER	3	FAERPALLELER3	99204.8	91947.7	107523
Q68FR6	A0A8I6AKG3;A0A8I5Y6C6;Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	0	FAESQPK	FAESQPK	1	FAESQPK1	13698.8	17106.6	9077.44
Q68FR6	A0A8I6AKG3;A0A8I5Y6C6;Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	0	FAESQPK	FAESQPK	2	FAESQPK2	1.86612e+06	1.87325e+06	2.06962e+06
F1MAF8	F1MAF8	F1MAF8_RAT	Atg2b	Autophagy related 2B	1	FAETIETVLR	FAETIETVLR	2	FAETIETVLR2	5520.65	1694.9	3766.53
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	FAEVIEK	FAEVIEK	2	FAEVIEK2	59902.7	60326.4	65779.4
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	FAEVYFAQSQQK	FAEVYFAQSQQK	2	FAEVYFAQSQQK2	280586	264198	293555
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	FAEVYFAQSQQK	FAEVYFAQSQQK	3	FAEVYFAQSQQK3	21759.2	27319.5	21109.9
Q68FQ9	Q68FQ9	Q68FQ9_RAT	Lancl2	LanC lantibiotic synthetase component C-like 2 (Bacterial)	1	FAEWCLDYGAHGCR	FAEWC(UniMod:4)LDYGAHGC(UniMod:4)R	3	FAEWC(UniMod:4)LDYGAHGC(UniMod:4)R3	1177.25	3669.49	
Q27W01	Q27W01	RBM8A_RAT	Rbm8a	RNA-binding protein 8A	1	FAEYGEIK	FAEYGEIK	2	FAEYGEIK2	19727.9	19757.7	7802.21
A0A8I5ZPV1	A0A8I5ZPV1	A0A8I5ZPV1_RAT	Tbc1d22a	TBC1 domain family, member 22a	1	FAFADAPNHYK	FAFADAPNHYK	3	FAFADAPNHYK3	30947.9	39460.1	22422
O88453	O88453;A0A8I6AJV7	SAFB1_RAT	Safb	Scaffold attachment factor B1	0	FAFDACNDVPAAPK	FAFDAC(UniMod:4)NDVPAAPK	2	FAFDAC(UniMod:4)NDVPAAPK2	6668.23	5875.14	6100.36
Q68FX0	Q68FX0	IDH3B_RAT	Idh3B	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	FAFDYATK	FAFDYATK	2	FAFDYATK2	136147	130038	152984
Q5PQN9	Q5PQN9	RM38_RAT	Mrpl38	Large ribosomal subunit protein mL38	1	FAFLLFK	FAFLLFK	2	FAFLLFK2	6165.72	4769.05	3031.37
D4A830	D4A830	D4A830_RAT	Ppa2	inorganic diphosphatase	1	FAFNGEFK	FAFNGEFK	2	FAFNGEFK2	13716.7	12638	15710.6
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	FAFNLYR	FAFNLYR	1	FAFNLYR1	16307.5	23518.2	25790.4
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	FAFNLYR	FAFNLYR	2	FAFNLYR2	2.9028e+07	2.51175e+07	2.55629e+07
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	FAFQAEVNR	FAFQAEVNR	2	FAFQAEVNR2	2.28272e+06	2.56615e+06	2.513e+06
A0A8I6GIL4	A0A8I6GIL4	A0A8I6GIL4_RAT	Tmem87a	Transmembrane protein 87A	1	FAFSPLSEEDEEDEQKEPMLK	FAFSPLSEEDEEDEQKEPMLK	3	FAFSPLSEEDEEDEQKEPMLK3	36194.3	36159.8	32039
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	FAGGDYTTTLEAFISASGR	FAGGDYTTTLEAFISASGR	3	FAGGDYTTTLEAFISASGR3	17845.7	38469.2	20535.4
Q9WVK7	Q9WVK7	HCDH_RAT	Hadh	Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial	1	FAGLHFFNPVPMMK	FAGLHFFNPVPMMK	3	FAGLHFFNPVPMMK3	9986.26	10793.4	11803.8
B2RZ33	B2RZ33	B2RZ33_RAT	Nck1	Cytoplasmic protein	1	FAGNPWYYGK	FAGNPWYYGK	2	FAGNPWYYGK2	22565.7	25279.8	19035.3
D3ZBM7	D3ZBM7	HACE1_RAT	Hace1	E3 ubiquitin-protein ligase HACE1	1	FAGQILGLALNHR	FAGQILGLALNHR	3	FAGQILGLALNHR3	2954.37	2028.6	2469.62
Q5U316	Q5U316	RAB35_RAT	Rab35	Ras-related protein Rab-35	1	FAGQMGIQLFETSAK	FAGQMGIQLFETSAK	2	FAGQMGIQLFETSAK2	30857.8	26480.5	24355.4
P20673	P20673	ARLY_RAT	Asl	Argininosuccinate lyase	1	FAGSVDPTMDK	FAGSVDPTMDK	2	FAGSVDPTMDK2	11255.3	7736	11862.1
P62250	A0A8I5XVG9;P62250;A0A8I5YCD9;A0A8I6AIA7	RS16_RAT	Rps16	Small ribosomal subunit protein uS9	0	FAGVDIR	FAGVDIR	2	FAGVDIR2	71044.6	64942.6	80505.9
B2RYM5	B2RYM5	BRCC3_RAT	Brcc3	Lys-63-specific deubiquitinase BRCC36	1	FAHAGSDVCTVPEK	FAHAGSDVC(UniMod:4)TVPEK	2	FAHAGSDVC(UniMod:4)TVPEK2	12135.7	10981.9	9209.2
B2RYM5	B2RYM5	BRCC3_RAT	Brcc3	Lys-63-specific deubiquitinase BRCC36	1	FAHAGSDVCTVPEK	FAHAGSDVC(UniMod:4)TVPEK	3	FAHAGSDVC(UniMod:4)TVPEK3	130020	122456	114472
Q8VHT6	Q8VHT6	AS3MT_RAT	As3mt	Arsenite methyltransferase	1	FAHDFLFTPVEASLLAPQTK	FAHDFLFTPVEASLLAPQTK	3	FAHDFLFTPVEASLLAPQTK3	2449.67	1969.2	2354.37
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	FAHNVVTTR	FAHNVVTTR	2	FAHNVVTTR2	211022	138476	3.38087e+07
F2Z3T4	F2Z3T4;A0A0G2JX72	MBNL2_RAT	Mbnl2	Muscleblind-like protein 2	0	FAHPADSTMIDTNDNTVTVCMDYIK	FAHPADSTMIDTNDNTVTVC(UniMod:4)MDYIK	3	FAHPADSTMIDTNDNTVTVC(UniMod:4)MDYIK3	10129.9	5340.56	6500.8
A0A8I5XWT0	A0A8I5XWT0	A0A8I5XWT0_RAT	Cd55	CD55 molecule (Cromer blood group)	1	FAHQSQVTYSCNK	FAHQSQVTYSC(UniMod:4)NK	2	FAHQSQVTYSC(UniMod:4)NK2	91508.5	128499	102803
A0A8I5XWT0	A0A8I5XWT0	A0A8I5XWT0_RAT	Cd55	CD55 molecule (Cromer blood group)	1	FAHQSQVTYSCNK	FAHQSQVTYSC(UniMod:4)NK	3	FAHQSQVTYSC(UniMod:4)NK3	788821	864758	776632
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	FAHTNVESLVK	FAHTNVESLVK	2	FAHTNVESLVK2	36345.6	27457.6	33169.1
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	FAHTNVESLVK	FAHTNVESLVK	3	FAHTNVESLVK3	663323	675321	702230
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	FAHTVVTSR	FAHTVVTSR	2	FAHTVVTSR2	448914	473235	420769
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	FAHYVITSQVVNSANK	FAHYVITSQVVNSANK	2	FAHYVITSQVVNSANK2	18703.3	18209	7.62633e+06
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	FAHYVITSQVVNSANK	FAHYVITSQVVNSANK	3	FAHYVITSQVVNSANK3	279839	342674	288366
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	FAHYVITSQVVNSANK	FAHYVITSQVVNSANK	4	FAHYVITSQVVNSANK4	36238.1	31234	29627.7
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	FAHYVITSQVVNSANKAR	FAHYVITSQVVNSANKAR	3	FAHYVITSQVVNSANKAR3	17584.2	18981.8	14816.7
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	FAHYVITSQVVNSANKAR	FAHYVITSQVVNSANKAR	4	FAHYVITSQVVNSANKAR4	36090.7	48107	75843.9
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	FAHYVITSQVVNSANKAREVAFDVEIPK	FAHYVITSQVVNSANKAREVAFDVEIPK	4	FAHYVITSQVVNSANKAREVAFDVEIPK4	2502.12	5227.7	6551.19
O88370	O88370	PI42C_RAT	Pip4k2c	Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma	1	FAIDDHDYLVSLTR	FAIDDHDYLVSLTR	2	FAIDDHDYLVSLTR2	2623.16	2110.48	
O88370	O88370	PI42C_RAT	Pip4k2c	Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma	1	FAIDDHDYLVSLTR	FAIDDHDYLVSLTR	3	FAIDDHDYLVSLTR3	18572.3	18661.1	21386.8
Q9Z1Y3	Q9Z1Y3	CADH2_RAT	Cdh2	Cadherin-2	1	FAILTDPNSNDGLVTVVKPIDFETNR	FAILTDPNSNDGLVTVVKPIDFETNR	3	FAILTDPNSNDGLVTVVKPIDFETNR3	50304.6	55314.6	46119.2
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	FAILTEK	FAILTEK	2	FAILTEK2	90435.7	141661	121472
Q9Z1P2	Q9QXQ0;Q8R4I6;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	FAIQDISVEETSAK	FAIQDISVEETSAK	2	FAIQDISVEETSAK2	825524	872588	810032
Q9Z1P2	Q9QXQ0;Q8R4I6;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	FAIQDISVEETSAK	FAIQDISVEETSAK	3	FAIQDISVEETSAK3	34321	51133.8	38744
F7FL28	F7FL28	F7FL28_RAT	Napsa	Napsin A aspartic peptidase	1	FAIQYGTGR	FAIQYGTGR	2	FAIQYGTGR2	59796.7	52786	50336.5
Q68FS3	Q68FS3	FBX7_RAT	Fbxo7	F-box only protein 7	1	FAITLNNK	FAITLNNK	2	FAITLNNK2	20910.1	23386	11636.9
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	FAIVMMGR	FAIVMMGR	2	FAIVMMGR2	31604.6	44478.9	54845.6
O89035	O89035	DIC_RAT	Slc25a10	Mitochondrial dicarboxylate carrier	1	FAIYETMR	FAIYETMR	2	FAIYETMR2	19313.8	13783.2	19344.3
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	FAKPVYPGQTLQTEMWK	FAKPVYPGQTLQTEMWK	3	FAKPVYPGQTLQTEMWK3	56310.3	66765.6	63509.3
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	FALAQAQK	FALAQAQK	2	FALAQAQK2	267638	247566	279207
P16232	P16232	DHI1_RAT	Hsd11b1	11-beta-hydroxysteroid dehydrogenase 1	1	FALDGFFSTIR	FALDGFFSTIR	2	FALDGFFSTIR2	14752.9	15289.2	14908.7
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	FALDMAR	FALDMAR	2	FALDMAR2	1.79954e+06	1.69785e+06	1.67274e+06
Q499S6	Q499S6	Q499S6_RAT	Ctsf	Cathepsin F	1	FALDMYNYGR	FALDMYNYGR	2	FALDMYNYGR2	2806.43	3853.68	
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	FALDVNIK	FALDVNIK	2	FALDVNIK2	40664.1	40753.1	25591.8
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	FALEVAAK	FALEVAAK	2	FALEVAAK2	51093.5	37184.4	
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	FALGIFAINEAVESGDVGR	FALGIFAINEAVESGDVGR	3	FALGIFAINEAVESGDVGR3	8409.4	9746.94	9108.48
P85971	P85971	6PGL_RAT	Pgls	6-phosphogluconolactonase	1	FALGLSGGSLVSMLAR	FALGLSGGSLVSMLAR	2	FALGLSGGSLVSMLAR2	8664.73	5711.05	8337.92
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	FALHSPLSPR	FALHSPLSPR	2	FALHSPLSPR2	1.04106e+06	901186	1.02434e+06
D3ZYQ7	D3ZYQ7	D3ZYQ7_RAT	Klhl14	Kelch-like family member 14	1	FALIPAPELVER	FALIPAPELVER	2	FALIPAPELVER2			14053.3
B0BNA5	B0BNA5	COTL1_RAT	Cotl1	Coactosin-like protein	1	FALITWIGEDVSGLQR	FALITWIGEDVSGLQR	2	FALITWIGEDVSGLQR2	114408	79511.7	83428.2
B0BNA5	B0BNA5	COTL1_RAT	Cotl1	Coactosin-like protein	1	FALITWIGEDVSGLQR	FALITWIGEDVSGLQR	3	FALITWIGEDVSGLQR3	73095.8	72889.8	81389.5
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	FALMAQK	FALMAQK	2	FALMAQK2	54324.8	42327.9	62751.4
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	FALMDEQGK	FALMDEQGK	2	FALMDEQGK2	3.86849e+07	39482.7	366892
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	FALMDEQGKK	FALMDEQGKK	2	FALMDEQGKK2	57770.5	8.99596e+06	8.94985e+06
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	FALMDEQGKK	FALMDEQGKK	3	FALMDEQGKK3	215298	2.57005e+07	2.71684e+07
B5DFH4	B5DFH4	B5DFH4_RAT	Papss2	3'-phosphoadenosine 5'-phosphosulfate synthase 2	1	FALMYEGR	FALMYEGR	2	FALMYEGR2	4054.35		2073.44
Q6AYR2	A0A8I6ASR6;Q6AYR2	NDRG3_RAT	Ndrg3	Protein NDRG3	0	FALNHPELVEGLVLINIDPCAK	FALNHPELVEGLVLINIDPC(UniMod:4)AK	3	FALNHPELVEGLVLINIDPC(UniMod:4)AK3		3927.89	
P20070	P20070	NB5R3_RAT	Cyb5r3	NADH-cytochrome b5 reductase 3	1	FALPSPQHILGLPIGQHIYLSTR	FALPSPQHILGLPIGQHIYLSTR	3	FALPSPQHILGLPIGQHIYLSTR3	31735.4	16950.9	7106.83
P20070	P20070	NB5R3_RAT	Cyb5r3	NADH-cytochrome b5 reductase 3	1	FALPSPQHILGLPIGQHIYLSTR	FALPSPQHILGLPIGQHIYLSTR	4	FALPSPQHILGLPIGQHIYLSTR4	38181.6	52617.6	32248.8
Q5EB81	Q5EB81	NB5R1_RAT	Cyb5r1	NADH-cytochrome b5 reductase 1	1	FALPTAHHILGLPVGK	FALPTAHHILGLPVGK	3	FALPTAHHILGLPVGK3	12848.8	6805.99	11732.6
Q5EB81	Q5EB81	NB5R1_RAT	Cyb5r1	NADH-cytochrome b5 reductase 1	1	FALPTAHHILGLPVGK	FALPTAHHILGLPVGK	4	FALPTAHHILGLPVGK4	13673.6	15269.4	15547.4
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	FALPVLHGFITMHSCSINGK	FALPVLHGFITMHSC(UniMod:4)SINGK	3	FALPVLHGFITMHSC(UniMod:4)SINGK3	3942.64		4628.83
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	FALPVLHGFITMHSCSINGK	FALPVLHGFITMHSC(UniMod:4)SINGK	4	FALPVLHGFITMHSC(UniMod:4)SINGK4	13189.9	15506.5	26060.9
P13264	P13264	GLSK_RAT	Gls	Glutaminase kidney isoform, mitochondrial	1	FALSAMDMEQR	FALSAMDMEQR	2	FALSAMDMEQR2	6754.03	11409.2	7207.69
Q6Y1S1	Q6Y1S1	MYD88_RAT	Myd88	Myeloid differentiation primary response protein MyD88	1	FALSLSPGVQQK	FALSLSPGVQQK	2	FALSLSPGVQQK2	12958.4	5122.18	9708.01
Q6AYB2	Q6AYB2	Q6AYB2_RAT	Sphk2	Sphingosine kinase 2	1	FALTLTTQALHIQR	FALTLTTQALHIQR	3	FALTLTTQALHIQR3	1056.98	2395.9	
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	FALVEVIAMIK	FALVEVIAMIK	2	FALVEVIAMIK2	28031	17364.1	21111.6
B3EY83	B3EY83	LCN12_RAT	Lcn12	Epididymal-specific lipocalin-12	1	FALVLSLR	FALVLSLR	2	FALVLSLR2	3490.16	2672.63	3373.12
O88902	O88902	PTN23_RAT	Ptpn23	Tyrosine-protein phosphatase non-receptor type 23 (Fragment)	1	FAMDVIGGK	FAMDVIGGK	2	FAMDVIGGK2	11715.8	10227.7	10985.3
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	FAMEQSFSADTGGGGR	FAMEQSFSADTGGGGR	2	FAMEQSFSADTGGGGR2	3229.28	2416.44	6164.37
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	FAMIVIAEPLR	FAMIVIAEPLR	2	FAMIVIAEPLR2	29805.1	36938.9	28470.3
F7FHP0	F7FHP0	F7FHP0_RAT	Angptl3	Angiopoietin-like 3	1	FAMLDDVK	FAMLDDVK	2	FAMLDDVK2	143016	139796	115897
D3ZVF4	D3ZVF4;Q5BJL8	TPC2B_RAT	Trappc2b	Trafficking protein particle complex subunit 2B	0	FAMNPFYEPNSPIR	FAMNPFYEPNSPIR	2	FAMNPFYEPNSPIR2	34058.5	31936.3	36346.4
A0A8I6A3Z5	A0A8I6A3Z5	A0A8I6A3Z5_RAT	Uba2	SUMO-activating enzyme subunit 2	1	FAMVAPDVQIEDGK	FAMVAPDVQIEDGK	2	FAMVAPDVQIEDGK2	6289.31	8121.94	10987
Q6AYT7	Q6AYT7	ABD12_RAT	Abhd12	Lysophosphatidylserine lipase ABHD12	1	FANDENMK	FANDENMK	2	FANDENMK2	29841	31872.6	26815
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	FANEITPITISVK	FANEITPITISVK	2	FANEITPITISVK2	107878	111946	110586
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	FANEITPITISVK	FANEITPITISVK	3	FANEITPITISVK3	10226.5	8789.28	14868.3
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	FANHGFK	FANHGFK	2	FANHGFK2	13882.7	13438.6	9495.15
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	FANHVNVEFSMPTTSASK	FANHVNVEFSMPTTSASK	3	FANHVNVEFSMPTTSASK3	27281.9	27149.3	27616.7
A0A8I6ADR8	A0A8I6ADR8;F1LTW9	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	0	FANIEEDTPSYHR	FANIEEDTPSYHR	2	FANIEEDTPSYHR2	2381.34	1521.67	
A0A8I6ADR8	A0A8I6ADR8;F1LTW9	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	0	FANIEEDTPSYHR	FANIEEDTPSYHR	3	FANIEEDTPSYHR3	26414.6	27700.8	39727.6
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	FANLIQSGK	FANLIQSGK	2	FANLIQSGK2	31418.6	41104.8	29334.4
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	FANLPNNAK	FANLPNNAK	2	FANLPNNAK2	116665	87225.6	95727.4
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	FANLTPEEFVGDYWR	FANLTPEEFVGDYWR	2	FANLTPEEFVGDYWR2	11683.4	10759.4	14630
P07633	P07633	PCCB_RAT	Pccb	Propionyl-CoA carboxylase beta chain, mitochondrial	1	FANPFPAAVR	FANPFPAAVR	2	FANPFPAAVR2	43937.9	39875.9	54815.1
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	FANSFIPK	FANSFIPK	2	FANSFIPK2	12539	5627.89	7319.7
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	FANSLPINDPLQTVYQLMSGR	FANSLPINDPLQTVYQLMSGR	3	FANSLPINDPLQTVYQLMSGR3	9766.75		
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	FANSLSGVQQQLQAFSTYR	FANSLSGVQQQLQAFSTYR	3	FANSLSGVQQQLQAFSTYR3	27666.4	28611.2	33870.7
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	FANSLVGVQQQLQAFNTYR	FANSLVGVQQQLQAFNTYR	3	FANSLVGVQQQLQAFNTYR3	68855.7	99735.5	107335
P31000	P31000	VIME_RAT	Vim	Vimentin	1	FANYIDK	FANYIDK	2	FANYIDK2	46385	30884.4	34597.2
Q5FVF4	Q5FVF4	TM7S3_RAT	Tm7sf3	Transmembrane 7 superfamily member 3	1	FAPANIGYAR	FAPANIGYAR	2	FAPANIGYAR2	58848.1	62947	34813.4
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	FAPFNSVMTPPPVHYLQFK	FAPFNSVMTPPPVHYLQFK	3	FAPFNSVMTPPPVHYLQFK3	23303	25478.9	30701.1
Q4KM35	Q4KM35	PSB10_RAT	Psmb10	Proteasome subunit beta type-10	1	FAPGTTPVQTQEVR	FAPGTTPVQTQEVR	2	FAPGTTPVQTQEVR2	3.54978e+06	3.45927e+06	3.62282e+06
Q4KM35	Q4KM35	PSB10_RAT	Psmb10	Proteasome subunit beta type-10	1	FAPGTTPVQTQEVR	FAPGTTPVQTQEVR	3	FAPGTTPVQTQEVR3	137167	144602	146074
Q63159	Q63159	COQ3_RAT	Coq3	Ubiquinone biosynthesis O-methyltransferase, mitochondrial	1	FAPLHSMNDLR	FAPLHSMNDLR	3	FAPLHSMNDLR3	10037.5	12426.8	8714.25
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	FAPPEPAEPWSFVK	FAPPEPAEPWSFVK	2	FAPPEPAEPWSFVK2	1.22789e+06	1.12682e+06	1.22264e+06
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	FAPPEPAEPWSFVK	FAPPEPAEPWSFVK	3	FAPPEPAEPWSFVK3	14400.1	25750.5	
Q64573	Q63108;Q64573;Q63010	EST1F_RAT	Ces1f	Liver carboxylesterase 1F	0	FAPPQPAEPWSFVK	FAPPQPAEPWSFVK	2	FAPPQPAEPWSFVK2	31367.8	23783.3	21306.1
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	FAPSEMDNEETDNTPK	FAPSEMDNEETDNTPK	2	FAPSEMDNEETDNTPK2	111821	133672	121465
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	FAPSEMDNEETDNTPK	FAPSEMDNEETDNTPK	3	FAPSEMDNEETDNTPK3	1.01126e+06	1.39963e+06	1.24452e+06
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	FAPSEMDNEETDNTPKDTTYK	FAPSEMDNEETDNTPKDTTYK	3	FAPSEMDNEETDNTPKDTTYK3	20208.9	14114.4	12488
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	FAPSEMDNEETDNTPKDTTYKK	FAPSEMDNEETDNTPKDTTYKK	4	FAPSEMDNEETDNTPKDTTYKK4	26591.6	33086.5	47385
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	FAPTVSDLLK	FAPTVSDLLK	2	FAPTVSDLLK2	60017.6	68847.5	47944.1
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	FAPVAPK	FAPVAPK	1	FAPVAPK1	37945	21130.9	12637.8
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	FAPVDESITFIGR	FAPVDESITFIGR	2	FAPVDESITFIGR2	43999.4	34526.8	24144.6
Q5XI07	D4A7U1;Q5XI07	LPP_RAT	Lpp	Lipoma-preferred partner homolog	0	FAPVVAPK	FAPVVAPK	2	FAPVVAPK2	548968	445545	426029
Q5XI07	D4A7U1;Q5XI07	LPP_RAT	Lpp	Lipoma-preferred partner homolog	0	FAPVVAPKPK	FAPVVAPKPK	2	FAPVVAPKPK2	184894	182783	124673
E9PTK4	E9PTK4	E9PTK4_RAT	Thnsl1	Threonine synthase-like 1	1	FAPVVLQALR	FAPVVLQALR	2	FAPVVLQALR2	16618.8	10294	12194.8
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	FAQALGSLR	FAQALGSLR	2	FAQALGSLR2	58520.2	60367.1	61832
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	FAQCTVLTIAHR	FAQC(UniMod:4)TVLTIAHR	2	FAQC(UniMod:4)TVLTIAHR2	2048.07	6034.57	2017.19
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	FAQCTVLTIAHR	FAQC(UniMod:4)TVLTIAHR	3	FAQC(UniMod:4)TVLTIAHR3	48233.4	45676.3	53220
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	FAQFDEYQLAK	FAQFDEYQLAK	2	FAQFDEYQLAK2	3285.23		4039.25
A0A8I6GFD8	A0A8I6GFD8	A0A8I6GFD8_RAT	Sfpq	Splicing factor proline and glutamine rich	1	FAQHGTFEYEYSQR	FAQHGTFEYEYSQR	3	FAQHGTFEYEYSQR3	13339.1		
Q4FZU0	Q4FZU0	Q4FZU0_RAT	Acp6	Acid phosphatase 6, lysophosphatidic	1	FAQLIEQR	FAQLIEQR	2	FAQLIEQR2	15189.3	4986.06	6617.63
G3V6N5	G3V6N5	G3V6N5_RAT	Slc66a3	Solute carrier family 66 member 3	1	FAQLQYLWK	FAQLQYLWK	2	FAQLQYLWK2	45259.2	58170.6	54077.5
P35284	P35284	RAB12_RAT	Rab12	Ras-related protein Rab-12	1	FAQQITGMR	FAQQITGMR	2	FAQQITGMR2	32855.5	29037.1	19756.4
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	FAQTLEK	FAQTLEK	1	FAQTLEK1	644.5	2234.46	1254.38
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	FAQTLEK	FAQTLEK	2	FAQTLEK2	339279	410958	348857
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	FAQTMEFVEEYLR	FAQTMEFVEEYLR	2	FAQTMEFVEEYLR2	9096.02	8771.69	5155.75
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	FAQTMEFVEEYLR	FAQTMEFVEEYLR	3	FAQTMEFVEEYLR3		1254.67	8282.4
A0A8I6B124	A0A8I6B124	A0A8I6B124_RAT	Zswim8	Zinc finger, SWIM-type containing 8	1	FAQYLISELPQQILPTAQR	FAQYLISELPQQILPTAQR	3	FAQYLISELPQQILPTAQR3	2498.28		5565.42
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	FAQYQSTIK	FAQYQSTIK	2	FAQYQSTIK2	17504.9	11282.1	15545.4
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	FAREEIIPVAPDYDK	FAREEIIPVAPDYDK	3	FAREEIIPVAPDYDK3	4482.53	6946.79	15314.9
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	FARPCTQMEAAAIGGEECVLGLTDR	FARPC(UniMod:4)TQMEAAAIGGEEC(UniMod:4)VLGLTDR	3	FARPC(UniMod:4)TQMEAAAIGGEEC(UniMod:4)VLGLTDR3	4286.95	4868.47	3319.77
Q9ES40	Q9ES40	PRAF3_RAT	Arl6ip5	PRA1 family protein 3	1	FARPDFR	FARPDFR	2	FARPDFR2	122051	119308	93454.6
P06214	P06214	HEM2_RAT	Alad	Delta-aminolevulinic acid dehydratase	1	FASCFYGPFR	FASC(UniMod:4)FYGPFR	2	FASC(UniMod:4)FYGPFR2	23633.6	22959.3	17745.4
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	FASEAEDKVR	FASEAEDKVR	3	FASEAEDKVR3	12464.4	11390.9	3865.61
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	FASEIAGVDDLGTTGR	FASEIAGVDDLGTTGR	2	FASEIAGVDDLGTTGR2	59537.9	47463.8	46292.5
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	FASEIAGVDDLGTTGR	FASEIAGVDDLGTTGR	3	FASEIAGVDDLGTTGR3	5280.32	4946.76	6600.7
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	FASEIVDTVYEDGDSIR	FASEIVDTVYEDGDSIR	3	FASEIVDTVYEDGDSIR3	7348.02	7332.43	8795.66
A0A8I5ZTU5	A0A8I5ZTU5	A0A8I5ZTU5_RAT	Ranbp1	RAN binding protein 1	1	FASENDLPEWK	FASENDLPEWK	2	FASENDLPEWK2	52074.9	47681.6	47610
Q6P6Q2	A0A8I5ZR22;Q6IG01;A0A0G2JVA8;Q6IFZ5;Q6IMF3;A0A8I5ZMI8;Q10758;Q6IG00;Q6IG03;A0A0G2K0I4;Q6IG04;Q6P6Q2;A0A0G2JUG1;Q6IG12;A0A8I6G380;Q4FZU2;Q6IG05;A0A8I6AP90;D3ZXB7	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	0	FASFIDK	FASFIDK	1	FASFIDK1	23500.5	18782.4	19848
Q6P6Q2	A0A8I5ZR22;Q6IG01;A0A0G2JVA8;Q6IFZ5;Q6IMF3;A0A8I5ZMI8;Q10758;Q6IG00;Q6IG03;A0A0G2K0I4;Q6IG04;Q6P6Q2;A0A0G2JUG1;Q6IG12;A0A8I6G380;Q4FZU2;Q6IG05;A0A8I6AP90;D3ZXB7	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	0	FASFIDK	FASFIDK	2	FASFIDK2	2.2608e+06	1.80365e+06	1.80775e+06
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	FASFPDYLVIQIK	FASFPDYLVIQIK	2	FASFPDYLVIQIK2	159070	174512	155903
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	FASFPDYLVIQIK	FASFPDYLVIQIK	3	FASFPDYLVIQIK3	6452.54	5650.14	5401.05
Q5XFW8	Q5XFW8	SEC13_RAT	Sec13	Protein SEC13 homolog	1	FASGGCDNLIK	FASGGC(UniMod:4)DNLIK	2	FASGGC(UniMod:4)DNLIK2	103281	79457	93730.5
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	FASLEFSPGSK	FASLEFSPGSK	2	FASLEFSPGSK2	66335.8	57264.4	84949.4
Q66H62	A0A8I6A0L1;Q66H62	CYLD_RAT	Cyld	Ubiquitin carboxyl-terminal hydrolase CYLD	0	FASLQPVSNQIER	FASLQPVSNQIER	2	FASLQPVSNQIER2	63329.2	61712.6	58739.1
A0A0G2K8F9	A0A0G2K8F9;D3Z8L5	A0A0G2K8F9_RAT	Pum2	Pumilio RNA-binding family member 2	0	FASNVVEK	FASNVVEK	2	FASNVVEK2	14628.4	20418.1	13665.1
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	FASSPLR	FASSPLR	2	FASSPLR2	97398	88183	94395.7
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	FASTVFPSDHIPSR	FASTVFPSDHIPSR	3	FASTVFPSDHIPSR3	11018.8		12782.1
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	FASYLTFSPSEVK	FASYLTFSPSEVK	2	FASYLTFSPSEVK2	18922.7	19594.6	22158.2
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	FATASADGQIFIYDGK	FATASADGQIFIYDGK	2	FATASADGQIFIYDGK2	23630.3	23872.7	17017.9
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	FATDGEGYKPCDPQVIR	FATDGEGYKPC(UniMod:4)DPQVIR	2	FATDGEGYKPC(UniMod:4)DPQVIR2	75115.7	76632.9	74285.8
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	FATDGEGYKPCDPQVIR	FATDGEGYKPC(UniMod:4)DPQVIR	3	FATDGEGYKPC(UniMod:4)DPQVIR3	15613.1	18121.9	1.15731e+06
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	FATEAAITILR	FATEAAITILR	2	FATEAAITILR2	227495	212867	199115
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	FATEAAITILR	FATEAAITILR	3	FATEAAITILR3	8531.5	5936.76	7442.35
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	FATEYCNTIEGTAK	FATEYC(UniMod:4)NTIEGTAK	2	FATEYC(UniMod:4)NTIEGTAK2	8534.14	19405.3	12490.5
Q6AYA6	Q6AYA6	CYBC1_RAT	Cybc1	Cytochrome b-245 chaperone 1	1	FATGFSHPLTQSAVMGR	FATGFSHPLTQSAVMGR	2	FATGFSHPLTQSAVMGR2	2516.92		2217.06
Q6AYA6	Q6AYA6	CYBC1_RAT	Cybc1	Cytochrome b-245 chaperone 1	1	FATGFSHPLTQSAVMGR	FATGFSHPLTQSAVMGR	3	FATGFSHPLTQSAVMGR3	74124.2	57235.8	55229
A0A8I6G4R8	A0A8I6G4R8	A0A8I6G4R8_RAT	Hdac5	Histone deacetylase	1	FATGLGCSLR	FATGLGC(UniMod:4)SLR	2	FATGLGC(UniMod:4)SLR2	7063.98	9067.83	8517.99
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	FATLAELVQYYMEHHGQLK	FATLAELVQYYMEHHGQLK	3	FATLAELVQYYMEHHGQLK3	29731.7	25294.9	26149.6
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	FATLAELVQYYMEHHGQLK	FATLAELVQYYMEHHGQLK	4	FATLAELVQYYMEHHGQLK4	60937	37976	78707
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	FATLAELVQYYMEHHGQLKEK	FATLAELVQYYMEHHGQLKEK	4	FATLAELVQYYMEHHGQLKEK4	26647.9	17984	24333.6
A0A8I6ABE7	A0A8I6ABE7	A0A8I6ABE7_RAT	Xpr1	Xenotropic and polytropic retrovirus receptor 1	1	FATLQNELQSSLDAQK	FATLQNELQSSLDAQK	2	FATLQNELQSSLDAQK2	4456.93	4226.94	2407.15
A0A0G2K2B7	A0A0G2K2B7	A0A0G2K2B7_RAT	Wdr20	WD repeat domain 20	1	FATLSLHDRK	FATLSLHDRK	3	FATLSLHDRK3	2665.14	3849.18	3549.73
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	FATLYSPGHR	FATLYSPGHR	2	FATLYSPGHR2	189805	152896	153348
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	FATLYSPGHR	FATLYSPGHR	3	FATLYSPGHR3	530448	546347	820245
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	FATNEAIQR	FATNEAIQR	2	FATNEAIQR2	26315.7	26007.5	23251.7
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	FATNFYQHLADSK	FATNFYQHLADSK	2	FATNFYQHLADSK2	60760.5	59166.1	36129.7
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	FATNFYQHLADSK	FATNFYQHLADSK	3	FATNFYQHLADSK3	691721	521854	528610
B4F7C7	B4F7C7	B4F7C7_RAT	Hebp1	Heme binding protein 1	1	FATVEVTDKPVDEALR	FATVEVTDKPVDEALR	3	FATVEVTDKPVDEALR3	5949.58	6532.64	4176.2
A0A8I5ZQE4	A0A8I5ZQE4	A0A8I5ZQE4_RAT	Supt5h	Transcription elongation factor SPT5	1	FAVALDSDQNNIHVK	FAVALDSDQNNIHVK	3	FAVALDSDQNNIHVK3		7942.21	
Q5BK18	Q5BK18	CIAO3_RAT	Ciao3	Cytosolic iron-sulfur assembly component 3	1	FAVAYGFR	FAVAYGFR	2	FAVAYGFR2	3656		
Q498T9	Q498T9;Q4V8I7	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	0	FAVFLSEVSENK	FAVFLSEVSENK	2	FAVFLSEVSENK2	9830.75	17872.9	10683.2
Q99PD4	Q99PD4	ARC1A_RAT	Arpc1a	Actin-related protein 2/3 complex subunit 1A	1	FAVGSGAR	FAVGSGAR	2	FAVGSGAR2	235058	256749	278486
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	FAVGSGSR	FAVGSGSR	2	FAVGSGSR2	501203	520983	512269
D3ZQC1	D3ZQC1	D3ZQC1_RAT	B3galt6	Hexosyltransferase	1	FAVGTSGLGAEER	FAVGTSGLGAEER	2	FAVGTSGLGAEER2	16802.9	21133.4	19599.6
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	FAVHVESVLNR	FAVHVESVLNR	3	FAVHVESVLNR3	5544.08	5016.98	3965.03
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	FAVLHGEAPR	FAVLHGEAPR	2	FAVLHGEAPR2	18240.4	8492.93	13628.6
Q62656	Q62656	PTPRZ_RAT	Ptprz1	Receptor-type tyrosine-protein phosphatase zeta	1	FAVLYQPLEGNDQTK	FAVLYQPLEGNDQTK	2	FAVLYQPLEGNDQTK2	138834	177053	160406
Q62656	Q62656	PTPRZ_RAT	Ptprz1	Receptor-type tyrosine-protein phosphatase zeta	1	FAVLYQPLEGNDQTK	FAVLYQPLEGNDQTK	3	FAVLYQPLEGNDQTK3	13605.8	14884.7	18267.1
Q498S0	Q498S0	Q498S0_RAT	Chst12	Carbohydrate sulfotransferase	1	FAVPMLR	FAVPMLR	2	FAVPMLR2	171163	181940	176705
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	FAVSAESLR	FAVSAESLR	2	FAVSAESLR2	41729.5	35115.9	38701.4
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	FAVSQMSSLLDSAHLVASSTQR	FAVSQMSSLLDSAHLVASSTQR	3	FAVSQMSSLLDSAHLVASSTQR3	119225	133892	76753.4
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	FAVTDFPSCYLLLR	FAVTDFPSC(UniMod:4)YLLLR	2	FAVTDFPSC(UniMod:4)YLLLR2	79119.5	71447.6	78519.1
A0A8I5ZLY7	A0A8I5ZLY7	A0A8I5ZLY7_RAT	Tapbp	TAP binding protein	1	FAYAPPALEDAPSVASGPPPFGLEWR	FAYAPPALEDAPSVASGPPPFGLEWR	3	FAYAPPALEDAPSVASGPPPFGLEWR3	57942	45340.1	76664.9
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	FAYDGLK	FAYDGLK	2	FAYDGLK2	118252	89452.8	80422.5
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	FAYIVDLDSDTADK	FAYIVDLDSDTADK	2	FAYIVDLDSDTADK2	26641.4	22595.8	19676.3
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	FAYLSGGR	FAYLSGGR	2	FAYLSGGR2	43905.8	37380.9	35090.2
Q499T5	Q499T5	Q499T5_RAT	Capn7	Calpain 7	1	FAYPMPFCDR	FAYPMPFC(UniMod:4)DR	2	FAYPMPFC(UniMod:4)DR2	3949.39		8960.45
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	FAYVAER	FAYVAER	2	FAYVAER2	24862	16193.6	20957.4
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	FAYVAEREDELSLVK	FAYVAEREDELSLVK	3	FAYVAEREDELSLVK3	129735	131152	142301
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	FCAFVQEAESRPR	FC(UniMod:4)AFVQEAESRPR	3	FC(UniMod:4)AFVQEAESRPR3	116567	131785	139542
A0A0G2K6C7	A0A0G2K6C7	A0A0G2K6C7_RAT	Trim5	Tripartite motif-containing 5	1	FCAGSFPDR	FC(UniMod:4)AGSFPDR	2	FC(UniMod:4)AGSFPDR2	18019.3	13309.5	11129.4
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	FCANTCVECR	FC(UniMod:4)ANTC(UniMod:4)VEC(UniMod:4)R	2	FC(UniMod:4)ANTC(UniMod:4)VEC(UniMod:4)R2	323040	310793	354981
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	FCATCAGAGADGCINCTEGYVMEEGR	FC(UniMod:4)ATC(UniMod:4)AGAGADGC(UniMod:4)INC(UniMod:4)TEGYVMEEGR	3	FC(UniMod:4)ATC(UniMod:4)AGAGADGC(UniMod:4)INC(UniMod:4)TEGYVMEEGR3	7816.69	4620.75	5366.98
Q66HG9	Q66HG9	MAVS_RAT	Mavs	Mitochondrial antiviral-signaling protein	1	FCCVDVLEILPYLSCLTTSDQDR	FC(UniMod:4)C(UniMod:4)VDVLEILPYLSC(UniMod:4)LTTSDQDR	3	FC(UniMod:4)C(UniMod:4)VDVLEILPYLSC(UniMod:4)LTTSDQDR3		11954.6	7618.79
D3ZRI9	D3ZRI9	D3ZRI9_RAT	Gan	Gigaxonin	1	FCDAHLVLDGEEIPVQK	FC(UniMod:4)DAHLVLDGEEIPVQK	3	FC(UniMod:4)DAHLVLDGEEIPVQK3	23267.5	19710.6	15763.5
A1KQY6	A1KQY6	A1KQY6_RAT	St8sia4	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	1	FCDEIHLYGFWPFPK	FC(UniMod:4)DEIHLYGFWPFPK	3	FC(UniMod:4)DEIHLYGFWPFPK3	8169.03	10420.8	
D4AB17	D4AB17	D4AB17_RAT	Pfas	phosphoribosylformylglycinamidine synthase	1	FCDNSSAIQGK	FC(UniMod:4)DNSSAIQGK	2	FC(UniMod:4)DNSSAIQGK2	4738.82	3811.75	3898.29
P58751	P58751	RELN_RAT	Reln	Reelin	1	FCDSPDGVMLCGSHDGR	FC(UniMod:4)DSPDGVMLC(UniMod:4)GSHDGR	3	FC(UniMod:4)DSPDGVMLC(UniMod:4)GSHDGR3	49704.4	50590.8	42473.3
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	FCDVFDK	FC(UniMod:4)DVFDK	2	FC(UniMod:4)DVFDK2	14508.4		15999.6
P35284	P35284	RAB12_RAT	Rab12	Ras-related protein Rab-12	1	FCEASAK	FC(UniMod:4)EASAK	2	FC(UniMod:4)EASAK2	17349	49324.4	68803.2
Q5PQQ8	Q5PQQ8	ITGBL_RAT	Itgbl1	Integrin beta-like protein 1	1	FCECDDRECIDDETEEICGGHGK	FC(UniMod:4)EC(UniMod:4)DDREC(UniMod:4)IDDETEEIC(UniMod:4)GGHGK	3	FC(UniMod:4)EC(UniMod:4)DDREC(UniMod:4)IDDETEEIC(UniMod:4)GGHGK3	1501.67	974.876	4163.07
Q5PQQ8	Q5PQQ8	ITGBL_RAT	Itgbl1	Integrin beta-like protein 1	1	FCECDDRECIDDETEEICGGHGK	FC(UniMod:4)EC(UniMod:4)DDREC(UniMod:4)IDDETEEIC(UniMod:4)GGHGK	4	FC(UniMod:4)EC(UniMod:4)DDREC(UniMod:4)IDDETEEIC(UniMod:4)GGHGK4	4983.98	5761.36	5308.77
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	FCECDNFNCDR	FC(UniMod:4)EC(UniMod:4)DNFNC(UniMod:4)DR	2	FC(UniMod:4)EC(UniMod:4)DNFNC(UniMod:4)DR2	509479	506172	567387
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	FCECDNFNCDR	FC(UniMod:4)EC(UniMod:4)DNFNC(UniMod:4)DR	3	FC(UniMod:4)EC(UniMod:4)DNFNC(UniMod:4)DR3	14621.7	18282.6	16854.6
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	FCEIGPDDCYVGDGYSYR	FC(UniMod:4)EIGPDDC(UniMod:4)YVGDGYSYR	3	FC(UniMod:4)EIGPDDC(UniMod:4)YVGDGYSYR3	1.16737e+06	1.01999e+06	1.17727e+06
A0A8I5ZLW0	A0A8I5ZLW0	A0A8I5ZLW0_RAT	Xaf1	XIAP associated factor 1	1	FCELAVQLSK	FC(UniMod:4)ELAVQLSK	2	FC(UniMod:4)ELAVQLSK2	8109.29	4715.33	5281.44
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	FCELCADGYFGDAVDAK	FC(UniMod:4)ELC(UniMod:4)ADGYFGDAVDAK	2	FC(UniMod:4)ELC(UniMod:4)ADGYFGDAVDAK2	1744.19	3644.85	3353.83
Q9R010	Q9R010	CIB1_RAT	Cib1	Calcium and integrin-binding protein 1	1	FCELLPPEHR	FC(UniMod:4)ELLPPEHR	3	FC(UniMod:4)ELLPPEHR3	84013.3	78170.8	91163.6
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	FCEMCCDCR	FC(UniMod:4)EMC(UniMod:4)C(UniMod:4)DC(UniMod:4)R	2	FC(UniMod:4)EMC(UniMod:4)C(UniMod:4)DC(UniMod:4)R2	25707.9	32957.3	33978.6
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	FCENPDEVK	FC(UniMod:4)ENPDEVK	2	FC(UniMod:4)ENPDEVK2	8.53e+06	9.66427e+06	9.19007e+06
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	FCENPDEVKR	FC(UniMod:4)ENPDEVKR	2	FC(UniMod:4)ENPDEVKR2	139902	120999	103864
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	FCENPDEVKR	FC(UniMod:4)ENPDEVKR	3	FC(UniMod:4)ENPDEVKR3	1.04067e+06	1.03889e+06	1.01317e+06
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	FCENTQAGEGR	FC(UniMod:4)ENTQAGEGR	2	FC(UniMod:4)ENTQAGEGR2	22740.6	10976.6	20363.4
A0A8I6AE91	A0A8I6AE91	A0A8I6AE91_RAT	Gga2	Golgi associated, gamma adaptin ear containing, ARF binding protein 2	1	FCEQVNTDPSGPTHAPWLLAHK	FC(UniMod:4)EQVNTDPSGPTHAPWLLAHK	4	FC(UniMod:4)EQVNTDPSGPTHAPWLLAHK4	20490.4	17884.2	19602.5
D3ZAP9	D3ZAP9	D3ZAP9_RAT	Gpd1l1	Glycerol-3-phosphate dehydrogenase [NAD(+)]	1	FCETTIGSK	FC(UniMod:4)ETTIGSK	2	FC(UniMod:4)ETTIGSK2	29711.6	34358.5	24696.8
Q6AYK3	Q6AYK3	INO1_RAT	Isyna1	Inositol-3-phosphate synthase 1	1	FCEVVPGR	FC(UniMod:4)EVVPGR	2	FC(UniMod:4)EVVPGR2	7495.94		
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	FCFDIEAADRPGVPLTVQAFSEEERK	FC(UniMod:4)FDIEAADRPGVPLTVQAFSEEERK	4	FC(UniMod:4)FDIEAADRPGVPLTVQAFSEEERK4	9818.82	6285.56	3890.96
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	FCFDIEANER	FC(UniMod:4)FDIEANER	2	FC(UniMod:4)FDIEANER2	28755.8	31454.8	22371.2
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	FCFLTCDAASYLGDNLR	FC(UniMod:4)FLTC(UniMod:4)DAASYLGDNLR	3	FC(UniMod:4)FLTC(UniMod:4)DAASYLGDNLR3	11279.7	13290	13627
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	FCFPDSEDCAPTLELK	FC(UniMod:4)FPDSEDC(UniMod:4)APTLELK	2	FC(UniMod:4)FPDSEDC(UniMod:4)APTLELK2	24750.2	27972.9	20746.7
D3Z8F6	D3Z8F6	D3Z8F6_RAT	Dennd1b	DENN domain containing 1B	1	FCFPFDVER	FC(UniMod:4)FPFDVER	2	FC(UniMod:4)FPFDVER2	27908.3	43546.6	37807.3
Q6AY25	Q6AY25	TMED3_RAT	Tmed3	Transmembrane emp24 domain-containing protein 3	1	FCFSNEFSTFSHK	FC(UniMod:4)FSNEFSTFSHK	3	FC(UniMod:4)FSNEFSTFSHK3	8417.13	12652.1	
D3ZTX0	D3ZTX0	TMED7_RAT	Tmed7	Transmembrane emp24 domain-containing protein 7	1	FCFSNEFSTFTHK	FC(UniMod:4)FSNEFSTFTHK	2	FC(UniMod:4)FSNEFSTFTHK2	8880.31	7320.73	11025.8
D3ZTX0	D3ZTX0	TMED7_RAT	Tmed7	Transmembrane emp24 domain-containing protein 7	1	FCFSNEFSTFTHK	FC(UniMod:4)FSNEFSTFTHK	3	FC(UniMod:4)FSNEFSTFTHK3	175214	144236	198559
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	FCGDETGMHTVSDGEEGEHK	FC(UniMod:4)GDETGMHTVSDGEEGEHK	3	FC(UniMod:4)GDETGMHTVSDGEEGEHK3	460.932	2212.24	
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	FCGDETGMHTVSDGEEGEHK	FC(UniMod:4)GDETGMHTVSDGEEGEHK	4	FC(UniMod:4)GDETGMHTVSDGEEGEHK4	2441.75	4403.75	5943.93
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	FCGLLTNPTGPLAACHK	FC(UniMod:4)GLLTNPTGPLAAC(UniMod:4)HK	2	FC(UniMod:4)GLLTNPTGPLAAC(UniMod:4)HK2	67085.3	51905.8	39015
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	FCGLLTNPTGPLAACHK	FC(UniMod:4)GLLTNPTGPLAAC(UniMod:4)HK	3	FC(UniMod:4)GLLTNPTGPLAAC(UniMod:4)HK3	584023	562972	483757
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	FCGQQDSPQGNPPGR	FC(UniMod:4)GQQDSPQGNPPGR	2	FC(UniMod:4)GQQDSPQGNPPGR2	396539	222179	219221
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	FCGQQDSPQGNPPGR	FC(UniMod:4)GQQDSPQGNPPGR	3	FC(UniMod:4)GQQDSPQGNPPGR3	541031	258137	322682
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	FCGQQDSPQGNPPGRK	FC(UniMod:4)GQQDSPQGNPPGRK	2	FC(UniMod:4)GQQDSPQGNPPGRK2	45560.8	32517.8	26460.8
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	FCGQQDSPQGNPPGRK	FC(UniMod:4)GQQDSPQGNPPGRK	3	FC(UniMod:4)GQQDSPQGNPPGRK3	1.38252e+06	998498	929432
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	FCGSEKPEVITSQYNNMR	FC(UniMod:4)GSEKPEVITSQYNNMR	3	FC(UniMod:4)GSEKPEVITSQYNNMR3	29118.2	27289	32600.8
A0A8I5ZKD4	A0A8I5ZKD4	A0A8I5ZKD4_RAT	Nhlrc3	NHL repeat containing 3	1	FCGSLVSR	FC(UniMod:4)GSLVSR	2	FC(UniMod:4)GSLVSR2	14773.3	20132.6	23021.8
O08628	O08628	PCOC1_RAT	Pcolce	Procollagen C-endopeptidase enhancer 1	1	FCGTFRPAPVVAPGNQVTLR	FC(UniMod:4)GTFRPAPVVAPGNQVTLR	3	FC(UniMod:4)GTFRPAPVVAPGNQVTLR3	25955.3	22701	21058.8
B1WBR6	B1WBR6	B1WBR6_RAT	Tmem129	Tmem129 protein	1	FCILDVCCVR	FC(UniMod:4)ILDVC(UniMod:4)C(UniMod:4)VR	2	FC(UniMod:4)ILDVC(UniMod:4)C(UniMod:4)VR2	5091.86	2996.86	9388.01
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	FCIQQVGDVTNR	FC(UniMod:4)IQQVGDVTNR	2	FC(UniMod:4)IQQVGDVTNR2	28715.9	36425.1	32899.5
P50878	A0A8I6ASF5;P50878	RL4_RAT	Rpl4	Large ribosomal subunit protein uL4	0	FCIWTESAFR	FC(UniMod:4)IWTESAFR	2	FC(UniMod:4)IWTESAFR2	35106.9	31315.5	22484
P16617	A0A8I6A6N5;P16617	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	0	FCLDNGAK	FC(UniMod:4)LDNGAK	2	FC(UniMod:4)LDNGAK2	183803	165028	229051
A0A0G2JVP5	A0A0G2JVP5	A0A0G2JVP5_RAT	Paip1	Poly(A) binding protein interacting protein 1	1	FCLESER	FC(UniMod:4)LESER	2	FC(UniMod:4)LESER2	48122.1	54120.2	43607
O70436	P84025;P97588;O54835;O70436;Q9R1V3	SMAD2_RAT	Smad2	Mothers against decapentaplegic homolog 2	0	FCLGLLSNVNR	FC(UniMod:4)LGLLSNVNR	2	FC(UniMod:4)LGLLSNVNR2	12176.2	9543.99	16516.4
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	FCLQYGAALIYTSVK	FC(UniMod:4)LQYGAALIYTSVK	2	FC(UniMod:4)LQYGAALIYTSVK2	4742.02	1953.72	3162.65
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	FCLQYTR	FC(UniMod:4)LQYTR	2	FC(UniMod:4)LQYTR2	55195.1	70504.8	69107.3
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	FCLSILTSHVK	FC(UniMod:4)LSILTSHVK	3	FC(UniMod:4)LSILTSHVK3	46229.5	33570.9	30000.5
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	FCLSKPGVYK	FC(UniMod:4)LSKPGVYK	3	FC(UniMod:4)LSKPGVYK3	3119.4	9091.15	
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	FCMDGVQTALR	FC(UniMod:4)MDGVQTALR	2	FC(UniMod:4)MDGVQTALR2	34885.1	33739.4	40551.2
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	FCMQCWSEYLTTK	FC(UniMod:4)MQC(UniMod:4)WSEYLTTK	2	FC(UniMod:4)MQC(UniMod:4)WSEYLTTK2	38570.6	40437.9	31534.2
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	FCMQCWSEYLTTK	FC(UniMod:4)MQC(UniMod:4)WSEYLTTK	3	FC(UniMod:4)MQC(UniMod:4)WSEYLTTK3	3181.88	6137.89	4539.94
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	FCNIVPTER	FC(UniMod:4)NIVPTER	2	FC(UniMod:4)NIVPTER2	455668	519078	428033
Q498D5	Q498D5	RMD2_RAT	Rmdn2	Regulator of microtubule dynamics protein 2	1	FCNLALLLPIVTK	FC(UniMod:4)NLALLLPIVTK	2	FC(UniMod:4)NLALLLPIVTK2	3872.29	1634.9	2897.82
D4A7V9	D4A7V9	E2AK4_RAT	Eif2ak4	eIF-2-alpha kinase GCN2	1	FCNLSLSSNSLCR	FC(UniMod:4)NLSLSSNSLC(UniMod:4)R	2	FC(UniMod:4)NLSLSSNSLC(UniMod:4)R2	1182.91	3578.98	
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	FCNNHVSTAK	FC(UniMod:4)NNHVSTAK	2	FC(UniMod:4)NNHVSTAK2	29962.4		15329
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	FCNNHVSTAK	FC(UniMod:4)NNHVSTAK	3	FC(UniMod:4)NNHVSTAK3			120687
Q66HG5	Q66HG5	TM9S2_RAT	Tm9sf2	Transmembrane 9 superfamily member 2	1	FCNPGFPIGCYITDK	FC(UniMod:4)NPGFPIGC(UniMod:4)YITDK	2	FC(UniMod:4)NPGFPIGC(UniMod:4)YITDK2	184032	192288	184129
Q66HG5	Q66HG5	TM9S2_RAT	Tm9sf2	Transmembrane 9 superfamily member 2	1	FCNPGFPIGCYITDK	FC(UniMod:4)NPGFPIGC(UniMod:4)YITDK	3	FC(UniMod:4)NPGFPIGC(UniMod:4)YITDK3	3827.84	5089.52	10301.5
A0A8I6A895	A0A8I6A895	A0A8I6A895_RAT	Zmym3	Zinc finger MYM-type containing 3	1	FCNTTCLGAYK	FC(UniMod:4)NTTC(UniMod:4)LGAYK	2	FC(UniMod:4)NTTC(UniMod:4)LGAYK2	2726.82	2872.92	
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	FCNVDDDELR	FC(UniMod:4)NVDDDELR	2	FC(UniMod:4)NVDDDELR2	5730.57	8419.56	1842.82
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	FCNVDDDELREYCIQAFESFVR	FC(UniMod:4)NVDDDELREYC(UniMod:4)IQAFESFVR	3	FC(UniMod:4)NVDDDELREYC(UniMod:4)IQAFESFVR3	8437.84	5678.24	5156.88
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	FCPAGVYEFVPLEQGDGFR	FC(UniMod:4)PAGVYEFVPLEQGDGFR	3	FC(UniMod:4)PAGVYEFVPLEQGDGFR3	36599.1	34841.5	46289.4
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	FCPEADSK	FC(UniMod:4)PEADSK	2	FC(UniMod:4)PEADSK2	23086	21915	19838.2
D3ZPW6	D3ZPW6	D3ZPW6_RAT	Lage3	Uncharacterized protein	1	FCPGNAGTMAVLPSGAHPVAR	FC(UniMod:4)PGNAGTMAVLPSGAHPVAR	3	FC(UniMod:4)PGNAGTMAVLPSGAHPVAR3	5810.02	6123.05	12001.1
Q5U2M6	Q5U2M6	DCAF8_RAT	Dcaf8	DDB1- and CUL4-associated factor 8	1	FCPHHLVNSESK	FC(UniMod:4)PHHLVNSESK	3	FC(UniMod:4)PHHLVNSESK3	9045.94	9892.77	15088.1
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	FCPLGFLR	FC(UniMod:4)PLGFLR	2	FC(UniMod:4)PLGFLR2	327434	346820	342990
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	FCPPPPQIPNAQVIETTVK	FC(UniMod:4)PPPPQIPNAQVIETTVK	3	FC(UniMod:4)PPPPQIPNAQVIETTVK3	118248	104426	130233
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	FCPSTQGAK	FC(UniMod:4)PSTQGAK	2	FC(UniMod:4)PSTQGAK2	181913	173417	156044
P20069	P20069	MPPA_RAT	Pmpca	Mitochondrial-processing peptidase subunit alpha	1	FCPVENIGK	FC(UniMod:4)PVENIGK	2	FC(UniMod:4)PVENIGK2	25379.5	37463.1	35736.2
D3ZJD8	D3ZJD8	D3ZJD8_RAT	Clec1b	C-type lectin domain family 1 member B	1	FCQELIR	FC(UniMod:4)QELIR	2	FC(UniMod:4)QELIR2	159316	144304	136347
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	FCQLHSSGARPPAPAMPGLTR	FC(UniMod:4)QLHSSGARPPAPAMPGLTR	4	FC(UniMod:4)QLHSSGARPPAPAMPGLTR4		6355.86	
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	FCQLLWR	FC(UniMod:4)QLLWR	2	FC(UniMod:4)QLLWR2	133476	135867	152502
O54923	O54923	EXOC6_RAT	Exoc6	Exocyst complex component 6	1	FCQLMMDTLPK	FC(UniMod:4)QLMMDTLPK	2	FC(UniMod:4)QLMMDTLPK2	5694.48	9790.13	8402.51
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	FCQPCPCPLPHLANFAESCFR	FC(UniMod:4)QPC(UniMod:4)PC(UniMod:4)PLPHLANFAESC(UniMod:4)FR	3	FC(UniMod:4)QPC(UniMod:4)PC(UniMod:4)PLPHLANFAESC(UniMod:4)FR3	34443	38131.2	39923.4
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	FCQQEMGFQDCR	FC(UniMod:4)QQEMGFQDC(UniMod:4)R	2	FC(UniMod:4)QQEMGFQDC(UniMod:4)R2	71743.1	70329.2	5.50433e+06
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	FCQQEMGFQDCR	FC(UniMod:4)QQEMGFQDC(UniMod:4)R	3	FC(UniMod:4)QQEMGFQDC(UniMod:4)R3	551499	678648	793738
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	FCRDDIELVK	FC(UniMod:4)RDDIELVK	2	FC(UniMod:4)RDDIELVK2	495809	492474	508164
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	FCRDDIELVK	FC(UniMod:4)RDDIELVK	3	FC(UniMod:4)RDDIELVK3	5.6106e+06	6.29727e+06	6.71631e+06
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	FCRDDIELVKELTDTGK	FC(UniMod:4)RDDIELVKELTDTGK	4	FC(UniMod:4)RDDIELVKELTDTGK4	5432.95	6443.46	6205.47
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	FCSEAQFECQNHR	FC(UniMod:4)SEAQFEC(UniMod:4)QNHR	2	FC(UniMod:4)SEAQFEC(UniMod:4)QNHR2	6113.46	9512.87	9043.79
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	FCSEAQFECQNHR	FC(UniMod:4)SEAQFEC(UniMod:4)QNHR	3	FC(UniMod:4)SEAQFEC(UniMod:4)QNHR3	281162	378900	345579
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	FCSLPEK	FC(UniMod:4)SLPEK	2	FC(UniMod:4)SLPEK2	135790	107221	117179
A0A8J8XTW6	A0A8J8XTW6	A0A8J8XTW6_RAT	Vps9d1	VPS9 domain containing 1	1	FCSQVALTPEER	FC(UniMod:4)SQVALTPEER	2	FC(UniMod:4)SQVALTPEER2	1549.94		1818.37
P10716	P10716	CLC4F_RAT	Clec4f	C-type lectin domain family 4 member F	1	FCTDNQCVILQPQGLGPK	FC(UniMod:4)TDNQC(UniMod:4)VILQPQGLGPK	3	FC(UniMod:4)TDNQC(UniMod:4)VILQPQGLGPK3	3365.67		6578.63
A4GW50	A4GW50	A4GW50_RAT	Stk38l	Serine/threonine kinase 38 like	1	FCTDSENR	FC(UniMod:4)TDSENR	2	FC(UniMod:4)TDSENR2	7372.73	9192.02	
P07335	P07335	KCRB_RAT	Ckb	Creatine kinase B-type	1	FCTGLTQIETLFK	FC(UniMod:4)TGLTQIETLFK	2	FC(UniMod:4)TGLTQIETLFK2	119492	114603	115705
P07335	P07335	KCRB_RAT	Ckb	Creatine kinase B-type	1	FCTGLTQIETLFK	FC(UniMod:4)TGLTQIETLFK	3	FC(UniMod:4)TGLTQIETLFK3	5850.6	1210.15	
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	FCTGTLDHISIR	FC(UniMod:4)TGTLDHISIR	3	FC(UniMod:4)TGTLDHISIR3	3146.98	2349.3	
F7FFW7	F7FFW7	F7FFW7_RAT	Atp6v0d1	ATPase H+ transporting V0 subunit D1	1	FCTLLGGTTADAMCPILEFEADRR	FC(UniMod:4)TLLGGTTADAMC(UniMod:4)PILEFEADRR	3	FC(UniMod:4)TLLGGTTADAMC(UniMod:4)PILEFEADRR3	10824.5	18202.4	
Q99PD4	Q99PD4	ARC1A_RAT	Arpc1a	Actin-related protein 2/3 complex subunit 1A	1	FCTTGIDGAMTIWDFK	FC(UniMod:4)TTGIDGAMTIWDFK	2	FC(UniMod:4)TTGIDGAMTIWDFK2	29235.9	28175.9	24278.6
Q99PD4	Q99PD4	ARC1A_RAT	Arpc1a	Actin-related protein 2/3 complex subunit 1A	1	FCTTGIDGAMTIWDFK	FC(UniMod:4)TTGIDGAMTIWDFK	3	FC(UniMod:4)TTGIDGAMTIWDFK3	4865.58	8967.32	8554.18
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	FCVDGHFFHR	FC(UniMod:4)VDGHFFHR	3	FC(UniMod:4)VDGHFFHR3	11267.9	8358.4	5501.92
G3V8G1	G3V8G1	G3V8G1_RAT	Agtpbp1	tubulin-glutamate carboxypeptidase	1	FCVGLLR	FC(UniMod:4)VGLLR	2	FC(UniMod:4)VGLLR2	12279.8		6678.78
Q99ND9	Q99ND9	RWDD1_RAT	Rwdd1	RWD domain-containing protein 1	1	FDAELLEIK	FDAELLEIK	2	FDAELLEIK2	54885.2	70302	35836.2
Q99ND9	Q99ND9	RWDD1_RAT	Rwdd1	RWD domain-containing protein 1	1	FDAELLEIKK	FDAELLEIKK	2	FDAELLEIKK2	2359.06	2755.29	5721.69
Q99ND9	Q99ND9	RWDD1_RAT	Rwdd1	RWD domain-containing protein 1	1	FDAELLEIKK	FDAELLEIKK	3	FDAELLEIKK3	28514.9	32587.1	19229.3
P67779	P67779;A0A8I5ZUY9;A0A8I5ZRR7	PHB1_RAT	Phb1	Prohibitin 1	0	FDAGELITQR	FDAGELITQR	2	FDAGELITQR2	179055	214468	257716
P67779	P67779;A0A8I5ZUY9;A0A8I5ZRR7	PHB1_RAT	Phb1	Prohibitin 1	0	FDAGELITQR	FDAGELITQR	3	FDAGELITQR3	4243.49	4564.38	
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	FDAGSGMATIR	FDAGSGMATIR	2	FDAGSGMATIR2	21037.1	27988.8	32152.6
P0C0A2	P0C0A2	VPS36_RAT	Vps36	Vacuolar protein-sorting-associated protein 36	1	FDAGTLLLSTHR	FDAGTLLLSTHR	3	FDAGTLLLSTHR3	15554.1	13169.2	7795.71
Q6AYD3	Q6AYD3	PA2G4_RAT	Pa2g4	Proliferation-associated protein 2G4	1	FDAMPFTLR	FDAMPFTLR	2	FDAMPFTLR2	17301.9	20231.3	16676.5
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	FDAQTGADR	FDAQTGADR	2	FDAQTGADR2	68125.5	44843.2	69188.4
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	FDAQTGADREVQR	FDAQTGADREVQR	3	FDAQTGADREVQR3	16294.7	26570.8	33228.6
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	FDASFFGVHPK	FDASFFGVHPK	2	FDASFFGVHPK2	2157.02	2317.18	4036.73
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	FDASFFGVHPK	FDASFFGVHPK	3	FDASFFGVHPK3	50835.4	50870.8	59832.1
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	FDATSAELQSWILR	FDATSAELQSWILR	2	FDATSAELQSWILR2	55332.9	61085.9	65616.6
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	FDATSAELQSWILR	FDATSAELQSWILR	3	FDATSAELQSWILR3	10104	11084.1	9336.53
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	FDAYCFK	FDAYC(UniMod:4)FK	2	FDAYC(UniMod:4)FK2	17395.2	16420.4	14554.1
P34067	P34067	PSB4_RAT	Psmb4	Proteasome subunit beta type-4	1	FDCGVVIAADMLGSYGSLAR	FDC(UniMod:4)GVVIAADMLGSYGSLAR	3	FDC(UniMod:4)GVVIAADMLGSYGSLAR3	301395	336280	344235
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	FDCHYCR	FDC(UniMod:4)HYC(UniMod:4)R	2	FDC(UniMod:4)HYC(UniMod:4)R2	74968.7	64374.3	63682.7
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	FDCHYCRDPLQGK	FDC(UniMod:4)HYC(UniMod:4)RDPLQGK	3	FDC(UniMod:4)HYC(UniMod:4)RDPLQGK3	8808.15	10340.9	15295.1
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	FDCHYCRDPLQGK	FDC(UniMod:4)HYC(UniMod:4)RDPLQGK	4	FDC(UniMod:4)HYC(UniMod:4)RDPLQGK4	11700.3	19916.1	18822.5
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	FDCPPNYVR	FDC(UniMod:4)PPNYVR	2	FDC(UniMod:4)PPNYVR2	469567	509903	426813
P63018	P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	FDDAVVQSDMK	FDDAVVQSDMK	2	FDDAVVQSDMK2	298091	273058	352666
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	FDDDVVSR	FDDDVVSR	2	FDDDVVSR2	66897.9	73054.2	55108.2
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	FDDGAGGDNEVQR	FDDGAGGDNEVQR	2	FDDGAGGDNEVQR2	108327	117886	116158
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	FDDGDVTECK	FDDGDVTEC(UniMod:4)K	2	FDDGDVTEC(UniMod:4)K2	133791	137819	133957
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	FDDGEDPLDAETQQGGGSNPFHR	FDDGEDPLDAETQQGGGSNPFHR	3	FDDGEDPLDAETQQGGGSNPFHR3	64594.3	67599.5	71267.1
Q6AYB2	Q6AYB2	Q6AYB2_RAT	Sphk2	Sphingosine kinase 2	1	FDDGVVHLCWVR	FDDGVVHLC(UniMod:4)WVR	3	FDDGVVHLC(UniMod:4)WVR3	24402.2	31691.8	28924.6
D3ZN39	D3ZN39	D3ZN39_RAT	Usp8	ubiquitinyl hydrolase 1	1	FDDHEVSDISVSSVR	FDDHEVSDISVSSVR	3	FDDHEVSDISVSSVR3	1103.18		8376.56
B2RYN7	B2RYN7	SPAST_RAT	Spast	Spastin	1	FDDIAGQELAK	FDDIAGQELAK	2	FDDIAGQELAK2	3650.88	7778.81	3312.83
Q06486	Q06486;Q9JJ76	KC1D_RAT	Csnk1d	Casein kinase I isoform delta	0	FDDKPDYSYLR	FDDKPDYSYLR	3	FDDKPDYSYLR3	24883.7	19919.7	11547.7
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	FDDPLLGPR	FDDPLLGPR	2	FDDPLLGPR2	49328.1	48353.5	57962.5
Q66H61	A0A8I6GJ92;Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	0	FDDTNPEK	FDDTNPEK	2	FDDTNPEK2	28067.7	17619.7	21030.4
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	FDDTNPEKEEAK	FDDTNPEKEEAK	3	FDDTNPEKEEAK3	33333.5	17642.8	24756.3
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	FDDVVQAIR	FDDVVQAIR	2	FDDVVQAIR2	111226	102763	98106.1
A0A0G2K350	A0A0G2K350	A0A0G2K350_RAT	Napg	NSF attachment protein gamma	1	FDEAALSIQK	FDEAALSIQK	2	FDEAALSIQK2	23854.2	25355.6	27489.4
Q9R080	Q9R080	GPSM1_RAT	Gpsm1	G-protein-signaling modulator 1	1	FDEAIVCCQR	FDEAIVC(UniMod:4)C(UniMod:4)QR	2	FDEAIVC(UniMod:4)C(UniMod:4)QR2	2747.06	4669.11	
A0A0G2JVL6	A0A0G2JVL6	A0A0G2JVL6_RAT	Ndufa8	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8	1	FDECVLDK	FDEC(UniMod:4)VLDK	2	FDEC(UniMod:4)VLDK2	40986.1	35363.8	33291.2
Q642B0	Q642B0	Q642B0_RAT	Gpc4	Glypican 4	1	FDEFFKELLENAEK	FDEFFKELLENAEK	3	FDEFFKELLENAEK3	6697.83	5880.52	
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	FDEFFSGGCAPGANPDSR	FDEFFSGGC(UniMod:4)APGANPDSR	2	FDEFFSGGC(UniMod:4)APGANPDSR2	103201	104925	95161.4
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	FDEFFSGGCAPGANPDSR	FDEFFSGGC(UniMod:4)APGANPDSR	3	FDEFFSGGC(UniMod:4)APGANPDSR3	25010.8	21739.3	30662.6
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	FDEFFSQGCAPGYK	FDEFFSQGC(UniMod:4)APGYK	2	FDEFFSQGC(UniMod:4)APGYK2	3.02572e+06	3.09189e+06	3.17785e+06
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	FDEFFSQGCAPGYK	FDEFFSQGC(UniMod:4)APGYK	3	FDEFFSQGC(UniMod:4)APGYK3	330086	342831	383817
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	FDEFFSQGCAPGYKK	FDEFFSQGC(UniMod:4)APGYKK	2	FDEFFSQGC(UniMod:4)APGYKK2	20999.3	24264.8	27189.2
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	FDEFFSQGCAPGYKK	FDEFFSQGC(UniMod:4)APGYKK	3	FDEFFSQGC(UniMod:4)APGYKK3	71323.3	115608	146791
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	FDEGRNNFEGEITK	FDEGRNNFEGEITK	3	FDEGRNNFEGEITK3	79882.5	128281	133623
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	FDEHDGPVR	FDEHDGPVR	2	FDEHDGPVR2	19495.9	20636.6	7695.98
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	FDEIFLK	FDEIFLK	2	FDEIFLK2	10987.6	8473.7	9287.37
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	FDEILEASDGIMVAR	FDEILEASDGIMVAR	2	FDEILEASDGIMVAR2	25461.7	14891.4	16766.9
Q923S8	Q923S8	PANK4_RAT	Pank4	4'-phosphopantetheine phosphatase	1	FDELLQLASR	FDELLQLASR	2	FDELLQLASR2	1967.79	2200.31	2767.9
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	FDELYHLK	FDELYHLK	2	FDELYHLK2	16895.5	18102.9	19041.2
P47967	P47967	LEG5_RAT	Lgals5	Galectin-5	1	FDENAVVR	FDENAVVR	2	FDENAVVR2	13805.6	14798.1	11929.7
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	FDESEKSK	FDESEKSK	2	FDESEKSK2			6944.29
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	FDESMQVFAK	FDESMQVFAK	2	FDESMQVFAK2	3794.63		
A0A8I5ZVX1	A0A8I5ZVX1	A0A8I5ZVX1_RAT	Ppfibp2	PPFIA binding protein 2	1	FDESTDYICPMEPGDAVSDSHR	FDESTDYIC(UniMod:4)PMEPGDAVSDSHR	3	FDESTDYIC(UniMod:4)PMEPGDAVSDSHR3	9230.34	9671.55	7362.65
P55053	A0A8I5ZZV4;P55053	FABP5_RAT	Fabp5	Fatty acid-binding protein 5	0	FDETTADGR	FDETTADGR	2	FDETTADGR2	6457.43	3199.92	11725
P55053	A0A8I5ZZV4;P55053	FABP5_RAT	Fabp5	Fatty acid-binding protein 5	0	FDETTADGRK	FDETTADGRK	2	FDETTADGRK2	6888.82	13652.3	8176.61
P55053	A0A8I5ZZV4;P55053	FABP5_RAT	Fabp5	Fatty acid-binding protein 5	0	FDETTADGRK	FDETTADGRK	3	FDETTADGRK3	2932.72	21188.2	4250.95
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	FDEVLIR	FDEVLIR	2	FDEVLIR2	225615	286317	207249
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	FDEVLVNHFCEEFGK	FDEVLVNHFC(UniMod:4)EEFGK	2	FDEVLVNHFC(UniMod:4)EEFGK2	28917.8	23715.3	22160.1
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	FDEVLVNHFCEEFGK	FDEVLVNHFC(UniMod:4)EEFGK	3	FDEVLVNHFC(UniMod:4)EEFGK3	357536	365166	323568
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	FDEVLVNHFCEEFGKK	FDEVLVNHFC(UniMod:4)EEFGKK	3	FDEVLVNHFC(UniMod:4)EEFGKK3	7186.62	4006.57	6514.1
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	FDEVLVNHFCEEFGKK	FDEVLVNHFC(UniMod:4)EEFGKK	4	FDEVLVNHFC(UniMod:4)EEFGKK4	6418.38	21019.9	10850.2
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	FDEWVAPTPEVADMQK	FDEWVAPTPEVADMQK	2	FDEWVAPTPEVADMQK2	22632.2	20249.2	14215.7
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	FDEWVAPTPEVADMQK	FDEWVAPTPEVADMQK	3	FDEWVAPTPEVADMQK3	10358.2	11549.4	2771.01
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	FDFDYTTMHR	FDFDYTTMHR	3	FDFDYTTMHR3	3410.17	1872.85	3945.73
A0A8I5ZMX2	A0A8I5ZMX2	A0A8I5ZMX2_RAT	Adamts3	ADAM metallopeptidase with thrombospondin type 1, motif 3	1	FDFGVGYK	FDFGVGYK	2	FDFGVGYK2	14934.9	14115.2	14350.2
A0JPJ7	A0JPJ7	OLA1_RAT	Ola1	Obg-like ATPase 1	1	FDFLCQCHKPASK	FDFLC(UniMod:4)QC(UniMod:4)HKPASK	3	FDFLC(UniMod:4)QC(UniMod:4)HKPASK3	14562.8	9395.04	7348.39
Q9JKC9	Q9JKC9	SYNRG_RAT	Synrg	Synergin gamma	1	FDFLVANSQSK	FDFLVANSQSK	2	FDFLVANSQSK2	11307.4	7069.9	10267.2
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	FDFMGTCTYLLVGSCGQNAALPAFK	FDFMGTC(UniMod:4)TYLLVGSC(UniMod:4)GQNAALPAFK	3	FDFMGTC(UniMod:4)TYLLVGSC(UniMod:4)GQNAALPAFK3	15221.3	12619.3	32434.8
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	FDFMLYAK	FDFMLYAK	2	FDFMLYAK2	17967.5	16898.7	17786.5
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	FDFPYPNVEEAQK	FDFPYPNVEEAQK	2	FDFPYPNVEEAQK2	6024.16	12341.6	15186.9
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	FDFPYPNVEEAQKDK	FDFPYPNVEEAQKDK	3	FDFPYPNVEEAQKDK3	24618.7	42391.7	29014.7
Q5XIL4	Q5XIL4	Q5XIL4_RAT	Sorbs3	Sorbin and SH3 domain containing 3	1	FDFQAQSPK	FDFQAQSPK	2	FDFQAQSPK2		11731.5	15389
A0A8I6AAA9	A0A8I6AAA9	A0A8I6AAA9_RAT	Lrch1	Leucine rich repeats and calponin homology domain containing 1	1	FDFSCNK	FDFSC(UniMod:4)NK	2	FDFSC(UniMod:4)NK2	26168.6	31644.5	25454.6
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	FDFSGLR	FDFSGLR	2	FDFSGLR2	40577.8	39773.6	36355.1
Q6AYE5	Q6AYE5	OAF_RAT	Oaf	Out at first protein homolog	1	FDFYVPQR	FDFYVPQR	2	FDFYVPQR2	37820.3	24023.2	27812
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	FDGAEGSWFQK	FDGAEGSWFQK	2	FDGAEGSWFQK2	29864.9	18713.4	20896.7
Q5XIF6	A0A8I6AF82;P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9;Q6AY56	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	FDGALNVDLTEFQTNLVPYPR	FDGALNVDLTEFQTNLVPYPR	3	FDGALNVDLTEFQTNLVPYPR3	1.77473e+06	1.5618e+06	1.6511e+06
Q5XIF6	A0A8I6AF82;P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9;Q6AY56	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	FDGALNVDLTEFQTNLVPYPR	FDGALNVDLTEFQTNLVPYPR	4	FDGALNVDLTEFQTNLVPYPR4	11416.2	4562.18	9372.75
D3ZJF9	D3ZJF9	D3ZJF9_RAT	Gla	Alpha-galactosidase	1	FDGCHCDSVVSLANGYK	FDGC(UniMod:4)HC(UniMod:4)DSVVSLANGYK	2	FDGC(UniMod:4)HC(UniMod:4)DSVVSLANGYK2	2806.77		1253.57
D3ZJF9	D3ZJF9	D3ZJF9_RAT	Gla	Alpha-galactosidase	1	FDGCHCDSVVSLANGYK	FDGC(UniMod:4)HC(UniMod:4)DSVVSLANGYK	3	FDGC(UniMod:4)HC(UniMod:4)DSVVSLANGYK3	12056.2	22098.9	21543.5
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	FDGDELTTDER	FDGDELTTDER	2	FDGDELTTDER2	3893.34	6940.81	5025.42
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	FDGGVEAIATR	FDGGVEAIATR	2	FDGGVEAIATR2	56721.9	52804.3	54781.6
B0BNN4	B0BNN4	B0BNN4_RAT	Cfp	Complement factor properdin	1	FDGQPCTGK	FDGQPC(UniMod:4)TGK	2	FDGQPC(UniMod:4)TGK2	191259	155766	115685
P58751	P58751	RELN_RAT	Reln	Reelin	1	FDGSIDLQANWYR	FDGSIDLQANWYR	2	FDGSIDLQANWYR2	45993	48377.9	31278.9
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	FDGTEGSR	FDGTEGSR	2	FDGTEGSR2	11001.5		6541.65
Q8R4A1	Q8R4A1	ERO1A_RAT	Ero1a	ERO1-like protein alpha	1	FDGVLTEGEGPR	FDGVLTEGEGPR	2	FDGVLTEGEGPR2	62389.2	53430.4	52421.7
Q8R4A1	Q8R4A1	ERO1A_RAT	Ero1a	ERO1-like protein alpha	1	FDGVLTEGEGPRR	FDGVLTEGEGPRR	3	FDGVLTEGEGPRR3	37448.8	30479.9	47219.8
P97519	P97519	HMGCL_RAT	Hmgcl	Hydroxymethylglutaryl-CoA lyase, mitochondrial	1	FDGVMQAAR	FDGVMQAAR	2	FDGVMQAAR2		7036.76	
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	FDGYLNQGANNK	FDGYLNQGANNK	2	FDGYLNQGANNK2	3809.26	2887.69	2907.88
Q8K4C0	Q8K4C0	FMO5_RAT	Fmo5	Flavin-containing monooxygenase 5	1	FDHEMFGLKPK	FDHEMFGLKPK	2	FDHEMFGLKPK2	1606.32		
Q8K4C0	Q8K4C0	FMO5_RAT	Fmo5	Flavin-containing monooxygenase 5	1	FDHEMFGLKPK	FDHEMFGLKPK	3	FDHEMFGLKPK3	2749.71	3664.59	3241.94
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	FDHGAEAIMPTIFNLIPNSAK	FDHGAEAIMPTIFNLIPNSAK	3	FDHGAEAIMPTIFNLIPNSAK3	10984.5	12502	18604.6
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	FDHGAEAIVPTLFNLVPNSAK	FDHGAEAIVPTLFNLVPNSAK	3	FDHGAEAIVPTLFNLVPNSAK3	37698.8	32193.4	31321.4
P30839	P30839	AL3A2_RAT	Aldh3a2	Aldehyde dehydrogenase family 3 member A2	1	FDHILYTGNTAVGK	FDHILYTGNTAVGK	3	FDHILYTGNTAVGK3	13196.1	10011.8	11935
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	FDHPFIFMIVESETQSPLFVGK	FDHPFIFMIVESETQSPLFVGK	3	FDHPFIFMIVESETQSPLFVGK3	17530.1	27638.9	35747.5
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	FDHPFIFMIVESETQSPLFVGK	FDHPFIFMIVESETQSPLFVGK	4	FDHPFIFMIVESETQSPLFVGK4	8452.05	9735.28	9899.63
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	FDHVPLATPNGDILIQDLSFEVR	FDHVPLATPNGDILIQDLSFEVR	3	FDHVPLATPNGDILIQDLSFEVR3	21038.9	18892.6	12526
Q7TPK6	Q9JIH7;Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	0	FDIEIGR	FDIEIGR	2	FDIEIGR2	58289.4	43673.8	51040
A0A8I6AC38	A0A1W2Q671;A0A8I6AC38	A0A8I6AC38_RAT	Wnk2	non-specific serine/threonine protein kinase	0	FDIELGR	FDIELGR	2	FDIELGR2	58289.4	43673.8	51040
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	FDIEMSMR	FDIEMSMR	2	FDIEMSMR2	10578.8	11735.6	7249.2
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	FDILDQEMK	FDILDQEMK	2	FDILDQEMK2	128488	124693	123550
P53676	P53676	AP3M1_RAT	Ap3m1	AP-3 complex subunit mu-1	1	FDITIGPK	FDITIGPK	2	FDITIGPK2	144031	149719	176393
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	FDKDHDVMLFLK	FDKDHDVMLFLK	3	FDKDHDVMLFLK3	16113.6	28840.1	15850
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	FDKEQMIALTEANETLK	FDKEQMIALTEANETLK	3	FDKEQMIALTEANETLK3		4340.88	6629.94
D3ZR49	D3ZR49	D3ZR49_RAT	Man1a2	alpha-1,2-Mannosidase	1	FDLGLEDVLIPHVDAGK	FDLGLEDVLIPHVDAGK	3	FDLGLEDVLIPHVDAGK3	5069.41		8430.67
P50398	P50398	GDIA_RAT	Gdi1	Rab GDP dissociation inhibitor alpha	1	FDLGQDVIDFTGHALALYR	FDLGQDVIDFTGHALALYR	3	FDLGQDVIDFTGHALALYR3	5933.34	4225.81	9429.89
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	FDLGQDVIDFTGHSLALYR	FDLGQDVIDFTGHSLALYR	3	FDLGQDVIDFTGHSLALYR3	34535.4	43434.8	23133.9
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	FDLHSSSHIDTLLER	FDLHSSSHIDTLLER	2	FDLHSSSHIDTLLER2		4059.86	
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	FDLHSSSHIDTLLER	FDLHSSSHIDTLLER	3	FDLHSSSHIDTLLER3	15560.2	19197.2	20165.6
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	FDLHSSSHIDTLLER	FDLHSSSHIDTLLER	4	FDLHSSSHIDTLLER4	30812.6	31673.6	27614.9
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	FDLHSSSHIDTLLEREDVTLK	FDLHSSSHIDTLLEREDVTLK	3	FDLHSSSHIDTLLEREDVTLK3	3926.71	3074.44	1957.03
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	FDLHSSSHIDTLLEREDVTLK	FDLHSSSHIDTLLEREDVTLK	4	FDLHSSSHIDTLLEREDVTLK4	21371.3	16055	11914
P04917	P04917	SRGN_RAT	Srgn	Serglycin	1	FDLIAEESNVGPPMTDPVLMR	FDLIAEESNVGPPMTDPVLMR	3	FDLIAEESNVGPPMTDPVLMR3	1.26057e+06	1.31584e+06	1.45957e+06
P04917	P04917	SRGN_RAT	Srgn	Serglycin	1	FDLIAEESNVGPPMTDPVLMR	FDLIAEESNVGPPMTDPVLMR	4	FDLIAEESNVGPPMTDPVLMR4	7255.83	6308.09	4131.87
M0R8P6	M0R8P6	M0R8P6_RAT	Wwc3	Uncharacterized protein	1	FDLIPFESLGR	FDLIPFESLGR	2	FDLIPFESLGR2	7040.31	14554.5	12894
Q6AY04	Q6AY04	MAIP1_RAT	Maip1	m-AAA protease-interacting protein 1, mitochondrial	1	FDLLEELVAK	FDLLEELVAK	2	FDLLEELVAK2	16038	12809.6	13614.1
Q5XIF6	P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9;Q6AY56;F1LUM5	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	FDLMYAK	FDLMYAK	1	FDLMYAK1	1.2292e+06	1.19395e+06	1.32473e+06
Q5XIF6	P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9;Q6AY56;F1LUM5	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	FDLMYAK	FDLMYAK	2	FDLMYAK2	1.86043e+07	1.76746e+07	1.92396e+07
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	FDLNEPLHLSFLQNAAK	FDLNEPLHLSFLQNAAK	2	FDLNEPLHLSFLQNAAK2		2275.04	
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	FDLNEPLHLSFLQNAAK	FDLNEPLHLSFLQNAAK	3	FDLNEPLHLSFLQNAAK3	6225.86	5900.94	6735.63
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	FDLNKPVR	FDLNKPVR	2	FDLNKPVR2	9921.81	9384.69	11927.3
D3ZG43	D3ZG43	D3ZG43_RAT	Ndufs3	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial	1	FDLNSPWEAFPAYR	FDLNSPWEAFPAYR	2	FDLNSPWEAFPAYR2	53373.2	62265	54164.3
D3ZG43	D3ZG43	D3ZG43_RAT	Ndufs3	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial	1	FDLNSPWEAFPAYR	FDLNSPWEAFPAYR	3	FDLNSPWEAFPAYR3	10937.7	7810.3	17215.5
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	FDLNTTSHVDK	FDLNTTSHVDK	2	FDLNTTSHVDK2	2516.31	4563.24	3252.72
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	FDLNTTSHVDK	FDLNTTSHVDK	3	FDLNTTSHVDK3	13370	6392.71	8707.05
E9PU15	E9PU15	E9PU15_RAT	Dicer1	Endoribonuclease Dicer	1	FDLPTEYR	FDLPTEYR	2	FDLPTEYR2	8501.65	7528.76	16399.6
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	FDLQLFEQK	FDLQLFEQK	2	FDLQLFEQK2			3266.33
Q812E8	Q812E8	NADE_RAT	Nadsyn1	Glutamine-dependent NAD(+) synthetase	1	FDLRPFLYNTR	FDLRPFLYNTR	3	FDLRPFLYNTR3	4056.74	3178.94	7366.17
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	FDLSENCSERPGLR	FDLSENC(UniMod:4)SERPGLR	3	FDLSENC(UniMod:4)SERPGLR3	364177	405656	366651
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	FDLSNNHPLGMAIFLK	FDLSNNHPLGMAIFLK	2	FDLSNNHPLGMAIFLK2	647.569	1789.81	3093.23
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	FDLSNNHPLGMAIFLK	FDLSNNHPLGMAIFLK	3	FDLSNNHPLGMAIFLK3	21224	15329.1	16581.1
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	FDLVGFIPLLR	FDLVGFIPLLR	2	FDLVGFIPLLR2		27982.9	40412.8
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	FDLVPVPPNLYGDFFTGDAYVILK	FDLVPVPPNLYGDFFTGDAYVILK	3	FDLVPVPPNLYGDFFTGDAYVILK3	13935.2	113520	137789
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	FDLWSLPK	FDLWSLPK	2	FDLWSLPK2	73216.9	79532	78492.5
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	FDMAENVVIVASQK	FDMAENVVIVASQK	2	FDMAENVVIVASQK2	2364.05	2698.47	4675.45
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	FDMAENVVIVASQK	FDMAENVVIVASQK	3	FDMAENVVIVASQK3	3439.34	4172.49	2517.61
Q64165	Q64165	Q64165_RAT	Gcnt1	Glucosaminyl (N-acetyl) transferase 1	1	FDMDVDPFALQCLEEHLR	FDMDVDPFALQC(UniMod:4)LEEHLR	3	FDMDVDPFALQC(UniMod:4)LEEHLR3	5580.75	9128.43	3598.57
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	FDMELDDLPK	FDMELDDLPK	2	FDMELDDLPK2	116151	109237	87386.1
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	FDMELDDLPKEK	FDMELDDLPKEK	3	FDMELDDLPKEK3	21358.6	16896.2	14665.4
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	FDMIVPILEK	FDMIVPILEK	2	FDMIVPILEK2	724935	856922	835355
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	FDNIQGDAVK	FDNIQGDAVK	2	FDNIQGDAVK2	45927	53981.7	45752.3
B5DFN2	D3ZWL6;B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	0	FDNLYCCR	FDNLYC(UniMod:4)C(UniMod:4)R	2	FDNLYC(UniMod:4)C(UniMod:4)R2	78081.9	80091.7	89321.7
P10760	P10760;A0A8I6A7X9	SAHH_RAT	Ahcy	Adenosylhomocysteinase	0	FDNLYGCR	FDNLYGC(UniMod:4)R	2	FDNLYGC(UniMod:4)R2	22695.4	20304.3	21695.4
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	FDNPAAVSPTPTR	FDNPAAVSPTPTR	2	FDNPAAVSPTPTR2	38954.9	35176.5	33437.7
A0A8I5ZNC2	A0A8I5ZNC2	A0A8I5ZNC2_RAT	Tmed8	Transmembrane p24 trafficking protein family member 8	1	FDNSYSLLR	FDNSYSLLR	2	FDNSYSLLR2	14863.5	11789.9	17341.6
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	FDNSYSLWR	FDNSYSLWR	2	FDNSYSLWR2	48202.7	55946.9	62962.9
Q99MS0	Q99MS0	S14L2_RAT	Sec14l2	SEC14-like protein 2	1	FDNTYSFIHAK	FDNTYSFIHAK	3	FDNTYSFIHAK3	11120	6523.77	5645.61
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	FDNVLPVSLAFDK	FDNVLPVSLAFDK	2	FDNVLPVSLAFDK2	62333.4	57302.1	62523.9
Q6P7D4	Q6P7D4	CP20A_RAT	Cyp20a1	Cytochrome P450 20A1	1	FDPDRFADEPVMK	FDPDRFADEPVMK	3	FDPDRFADEPVMK3	37579.6	42028.1	24846.8
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	FDPDSKK	FDPDSKK	2	FDPDSKK2			11528.2
D4A4T9	D4A4T9	CHRD1_RAT	Chordc1	Cysteine and histidine-rich domain-containing protein 1	1	FDPEANADDACTYHPGVPVFHDALK	FDPEANADDAC(UniMod:4)TYHPGVPVFHDALK	4	FDPEANADDAC(UniMod:4)TYHPGVPVFHDALK4	4769.02	1299.56	4316.36
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	FDPELLFR	FDPELLFR	2	FDPELLFR2	651431	602090	672839
B5DFF2	B5DFF2	B5DFF2_RAT	Rbpms2	RNA binding protein, mRNA processing factor 2	1	FDPENPQTLR	FDPENPQTLR	2	FDPENPQTLR2	103219	106438	94894
A0A0G2K3W2	D3ZEB1;A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	0	FDPPIVAR	FDPPIVAR	2	FDPPIVAR2	1.31974e+07	1.56298e+07	1.45057e+07
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	FDPSLTQK	FDPSLTQK	1	FDPSLTQK1	32501.3	40879	30807.1
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	FDPSLTQK	FDPSLTQK	2	FDPSLTQK2	639538	595354	499896
D3Z8E6	D3Z8E6	CAMP1_RAT	Camsap1	Calmodulin-regulated spectrin-associated protein 1	1	FDPVPQGQVADGFFLHVGR	FDPVPQGQVADGFFLHVGR	3	FDPVPQGQVADGFFLHVGR3	1660.96		
P97576	P97576	GRPE1_RAT	Grpel1	GrpE protein homolog 1, mitochondrial	1	FDPYEHEALFHTPVEGK	FDPYEHEALFHTPVEGK	3	FDPYEHEALFHTPVEGK3	5125.83		
P97576	P97576	GRPE1_RAT	Grpel1	GrpE protein homolog 1, mitochondrial	1	FDPYEHEALFHTPVEGK	FDPYEHEALFHTPVEGK	4	FDPYEHEALFHTPVEGK4	9008.62	2451.79	
Q3MQ06	Q3MQ06	ATG5_RAT	Atg5	Autophagy protein 5	1	FDQFWTINR	FDQFWTINR	2	FDQFWTINR2	28528.6	19939.6	21445.6
E9PU37	E9PU37	E9PU37_RAT	Zdhhc13	Palmitoyltransferase	1	FDQHCFWTGR	FDQHC(UniMod:4)FWTGR	3	FDQHC(UniMod:4)FWTGR3	12298.3	13371.9	20525.2
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	FDQIYDVGYQYGK	FDQIYDVGYQYGK	2	FDQIYDVGYQYGK2	3895.1	3394.68	3714.74
Q6AXS5	Q6AXS5	SERB1_RAT	Serbp1	SERPINE1 mRNA-binding protein 1	1	FDQLFDDESDPFEVLK	FDQLFDDESDPFEVLK	2	FDQLFDDESDPFEVLK2	20251.9	9006.75	16384.5
Q62812	F1LNF0;Q63862;Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	FDQLLAEEK	FDQLLAEEK	2	FDQLLAEEK2	35411.4	43073.5	31393.1
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	FDQLLAEEKTISAK	FDQLLAEEKTISAK	3	FDQLLAEEKTISAK3	4475.86	8599.43	16541.6
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	FDQQCGELDVYK	FDQQC(UniMod:4)GELDVYK	2	FDQQC(UniMod:4)GELDVYK2	36047.2	36796.7	33703.6
D3ZCI9	D3ZCI9	D3ZCI9_RAT	Myl10	Myosin light chain 10	1	FDQSQIQEFK	FDQSQIQEFK	2	FDQSQIQEFK2	58549.9	57979.7	53398.3
Q75WE7	Q75WE7	VWA5A_RAT	Vwa5a	von Willebrand factor A domain-containing protein 5A	1	FDRDVELLIYYR	FDRDVELLIYYR	3	FDRDVELLIYYR3	13082.5		2539.42
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	FDREVDIGIPDATGR	FDREVDIGIPDATGR	2	FDREVDIGIPDATGR2	5604.71	5580.64	3910.32
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	FDREVDIGIPDATGR	FDREVDIGIPDATGR	3	FDREVDIGIPDATGR3	154664	168036	174139
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	FDSCLSDLAAVSNK	FDSC(UniMod:4)LSDLAAVSNK	2	FDSC(UniMod:4)LSDLAAVSNK2	4391.49	4618.43	4142.01
P16391	P16391;A0A0G2K1E1;A0A0G2K4S5;A0A8J8XB15;A0A8J8Y6P7;A0A8I6ASE5	HA12_RAT		RT1 class I histocompatibility antigen, AA alpha chain	0	FDSDAENPR	FDSDAENPR	2	FDSDAENPR2	13097.8	15089.6	16887
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	FDSDEGDQCSR	FDSDEGDQC(UniMod:4)SR	2	FDSDEGDQC(UniMod:4)SR2	157216	140506	164439
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	FDSELSQAHEETQR	FDSELSQAHEETQR	3	FDSELSQAHEETQR3	8907.91	7957.63	4135.35
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	FDSKPAPSAQPAPPPHPPSR	FDSKPAPSAQPAPPPHPPSR	4	FDSKPAPSAQPAPPPHPPSR4	51158.7	53267.7	64324.9
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	FDSLTDLVEHYK	FDSLTDLVEHYK	2	FDSLTDLVEHYK2	46086	47049.6	46620.9
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	FDSLTDLVEHYK	FDSLTDLVEHYK	3	FDSLTDLVEHYK3	61202.4	64631.6	87831.3
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	FDSLTDLVEHYKK	FDSLTDLVEHYKK	4	FDSLTDLVEHYKK4	7299.72	2857.1	10279.3
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	FDSNCITPGTEFMAR	FDSNC(UniMod:4)ITPGTEFMAR	2	FDSNC(UniMod:4)ITPGTEFMAR2	15299.9	17288.4	13759.5
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	FDSNHNPEDPDIIR	FDSNHNPEDPDIIR	3	FDSNHNPEDPDIIR3	15247.3	9914.26	17751.5
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	FDSPTYR	FDSPTYR	2	FDSPTYR2	30630.5	25438.6	17124.2
D3ZP15	D3ZP15	D3ZP15_RAT	Rab9b	RAB9B, member RAS oncogene family	1	FDSQAFHTIGVEFLNR	FDSQAFHTIGVEFLNR	3	FDSQAFHTIGVEFLNR3	9991.84	11366	9535.32
Q66H94	Q66H94;Q5U2V1	FKBP9_RAT	Fkbp9	Peptidyl-prolyl cis-trans isomerase FKBP9	0	FDSSYDR	FDSSYDR	2	FDSSYDR2	11832	2897.9	6592.19
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	FDSVNLEEACLER	FDSVNLEEAC(UniMod:4)LER	2	FDSVNLEEAC(UniMod:4)LER2	16568.4	19297.7	17331.2
Q0H8B9	Q0H8B9	CL2DB_RAT	Clec2d11	C-type lectin domain family 2 member D11	1	FDTEEELNFLSR	FDTEEELNFLSR	2	FDTEEELNFLSR2	19081.3	9783.75	17094.6
P62703	D3ZX01;P62703	RS4X_RAT	Rps4x	Small ribosomal subunit protein eS4	0	FDTGNLCMVTGGANLGR	FDTGNLC(UniMod:4)MVTGGANLGR	2	FDTGNLC(UniMod:4)MVTGGANLGR2	19563.3	24136	19971.3
P62703	D3ZX01;P62703	RS4X_RAT	Rps4x	Small ribosomal subunit protein eS4	0	FDTGNLCMVTGGANLGR	FDTGNLC(UniMod:4)MVTGGANLGR	3	FDTGNLC(UniMod:4)MVTGGANLGR3	6400.7	6243.97	10465.2
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	FDTIDDK	FDTIDDK	2	FDTIDDK2	39418.9	41308.9	32706.2
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	FDTISEK	FDTISEK	1	FDTISEK1	31951.5	23099.6	14075.6
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	FDTISEK	FDTISEK	2	FDTISEK2	1.00707e+06	1.04208e+06	1.07794e+06
Q02445	Q02445	TFPI1_RAT	Tfpi	Tissue factor pathway inhibitor	1	FDTLEECR	FDTLEEC(UniMod:4)R	2	FDTLEEC(UniMod:4)R2	105544	68090.5	84415.9
Q02445	Q02445	TFPI1_RAT	Tfpi	Tissue factor pathway inhibitor	1	FDTLEECRK	FDTLEEC(UniMod:4)RK	2	FDTLEEC(UniMod:4)RK2	21685.9	27992.1	15112.1
Q02445	Q02445	TFPI1_RAT	Tfpi	Tissue factor pathway inhibitor	1	FDTLEECRK	FDTLEEC(UniMod:4)RK	3	FDTLEEC(UniMod:4)RK3	695546	734287	677236
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	FDTLTDSR	FDTLTDSR	2	FDTLTDSR2	207074	211641	196292
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	FDTLWQLVEHYSYKPDGLLR	FDTLWQLVEHYSYKPDGLLR	3	FDTLWQLVEHYSYKPDGLLR3	7026.82	3671.15	7498.09
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	FDTLWQLVEHYSYKPDGLLR	FDTLWQLVEHYSYKPDGLLR	4	FDTLWQLVEHYSYKPDGLLR4	43426.7	30171.5	42196.4
P52555	P52555	ERP29_RAT	Erp29	Endoplasmic reticulum resident protein 29	1	FDTQYPYGEK	FDTQYPYGEK	2	FDTQYPYGEK2	30032.2	15913.2	21719.4
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	FDTTPNELVQLNK	FDTTPNELVQLNK	2	FDTTPNELVQLNK2	23662.5	26706.8	32874.4
D3ZYF5	D3ZYF5	D3ZYF5_RAT	Trim58	Tripartite motif-containing 58	1	FDTWPCILGLQGFSSGR	FDTWPC(UniMod:4)ILGLQGFSSGR	2	FDTWPC(UniMod:4)ILGLQGFSSGR2	13346.6	11137	6153.23
O08628	O08628	PCOC1_RAT	Pcolce	Procollagen C-endopeptidase enhancer 1	1	FDVEPDTYCR	FDVEPDTYC(UniMod:4)R	2	FDVEPDTYC(UniMod:4)R2	23016.3	25107.8	21853.1
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	FDVEVLK	FDVEVLK	1	FDVEVLK1	12510	15528.8	12601.7
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	FDVEVLK	FDVEVLK	2	FDVEVLK2	854608	929850	867974
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	FDVFEDFISPTTAAQTLLFTACSK	FDVFEDFISPTTAAQTLLFTAC(UniMod:4)SK	3	FDVFEDFISPTTAAQTLLFTAC(UniMod:4)SK3		3758.76	10656.1
P80385	A0A140UHX4;P80385	AAKG1_RAT	Prkag1	5'-AMP-activated protein kinase subunit gamma-1	0	FDVINLAAEK	FDVINLAAEK	2	FDVINLAAEK2	75482	81029	84917.6
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	FDVLAPHLTK	FDVLAPHLTK	3	FDVLAPHLTK3	9279.6	5096.69	7243.57
A0A8I6A9T1	A0A8I6A9T1	A0A8I6A9T1_RAT	Traf7	TNF receptor associated factor 7	1	FDVLDENQSK	FDVLDENQSK	2	FDVLDENQSK2	8143.21	7751.88	2925.78
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	FDVNTSAVQVLIEHIGNLDR	FDVNTSAVQVLIEHIGNLDR	3	FDVNTSAVQVLIEHIGNLDR3	347669	315429	359777
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	FDVPGDENAEMDAR	FDVPGDENAEMDAR	2	FDVPGDENAEMDAR2	124305	139913	135267
O35824	O35824	DNJA2_RAT	Dnaja2	DnaJ homolog subfamily A member 2	1	FDVQFPENNWINPDK	FDVQFPENNWINPDK	2	FDVQFPENNWINPDK2	19612	16210.1	25430.6
O35824	O35824	DNJA2_RAT	Dnaja2	DnaJ homolog subfamily A member 2	1	FDVQFPENNWINPDK	FDVQFPENNWINPDK	3	FDVQFPENNWINPDK3	19124.3	13476.5	19362.9
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	FDVQSSLK	FDVQSSLK	2	FDVQSSLK2	54088.8	57951.2	54127.5
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	FDVSGLTTEQMLR	FDVSGLTTEQMLR	2	FDVSGLTTEQMLR2	70015.4	80320.8	69801.6
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	FDVSGYPTIK	FDVSGYPTIK	2	FDVSGYPTIK2	393919	335476	356184
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	FDVSGYPTLK	FDVSGYPTLK	2	FDVSGYPTLK2	393919	335476	356184
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	FDVSPVK	FDVSPVK	2	FDVSPVK2	30880.6	24667.4	25706.2
B4F7E8	B4F7E8	NIBA2_RAT	Niban2	Protein Niban 2	1	FDVSSTSVFK	FDVSSTSVFK	2	FDVSSTSVFK2		2092.87	
Q9WV63	Q9WV63;A0A8I6A456	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	0	FDYAFDDSAPNEMVYR	FDYAFDDSAPNEMVYR	2	FDYAFDDSAPNEMVYR2	195159	186606	208461
Q9WV63	Q9WV63;A0A8I6A456	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	0	FDYAFDDSAPNEMVYR	FDYAFDDSAPNEMVYR	3	FDYAFDDSAPNEMVYR3	83582.7	82501.1	94879.9
B2RZ33	B2RZ33	B2RZ33_RAT	Nck1	Cytoplasmic protein	1	FDYVAQQEQELDIKK	FDYVAQQEQELDIKK	3	FDYVAQQEQELDIKK3	7002.78		
P13264	P13264	GLSK_RAT	Gls	Glutaminase kidney isoform, mitochondrial	1	FDYVMQFLNK	FDYVMQFLNK	2	FDYVMQFLNK2	31239.4	30392.4	34420
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	FEAAETLEEAALR	FEAAETLEEAALR	2	FEAAETLEEAALR2	98234.5	123550	96715.9
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	FEAAETLEEAALR	FEAAETLEEAALR	3	FEAAETLEEAALR3	12037.4	20429	18588.1
F1MAD3	F1MAD3	F1MAD3_RAT	Pkd1	Polycystin 1, transient receptor potential channel interacting	1	FEAATSPSPR	FEAATSPSPR	2	FEAATSPSPR2	7614.88	6263.91	2330.13
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	FEACPETQVPLQLESK	FEAC(UniMod:4)PETQVPLQLESK	2	FEAC(UniMod:4)PETQVPLQLESK2	18305.3	19951.6	24005.6
A0A8I5ZQG6	A0A8I5ZQG6	A0A8I5ZQG6_RAT	Sez6l2	Seizure related 6 homolog like 2	1	FEAFEEDR	FEAFEEDR	2	FEAFEEDR2	12765	13198.9	13324.4
B2RZ78	B2RZ78	VPS29_RAT	Vps29	Vacuolar protein sorting-associated protein 29	1	FEAFEHENK	FEAFEHENK	2	FEAFEHENK2	13458.3	9964.67	8329.78
B2RZ78	B2RZ78	VPS29_RAT	Vps29	Vacuolar protein sorting-associated protein 29	1	FEAFEHENK	FEAFEHENK	3	FEAFEHENK3	21783.1	16077.3	17611.3
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	FEALAAHDALVELSGAMNTTACSLMK	FEALAAHDALVELSGAMNTTAC(UniMod:4)SLMK	3	FEALAAHDALVELSGAMNTTAC(UniMod:4)SLMK3	37660.1	35691.5	50748.3
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	FEALAAHDALVELSGAMNTTACSLMK	FEALAAHDALVELSGAMNTTAC(UniMod:4)SLMK	4	FEALAAHDALVELSGAMNTTAC(UniMod:4)SLMK4	4169.25	3421.33	3397.26
Q9ERE6	Q9ERE6	MPRIP_RAT	Mprip	Myosin phosphatase Rho-interacting protein	1	FEALDIEK	FEALDIEK	2	FEALDIEK2	8695.63	12736.6	10745.7
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	FEALKEPLATR	FEALKEPLATR	3	FEALKEPLATR3	34487.3	25628.6	40348.7
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	FEALNFDFQAQAQFLELNANPLVLK	FEALNFDFQAQAQFLELNANPLVLK	3	FEALNFDFQAQAQFLELNANPLVLK3	6537.37		
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	FEAPLFNAR	FEAPLFNAR	2	FEAPLFNAR2	145999	131114	157366
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	FEATNSGPILR	FEATNSGPILR	2	FEATNSGPILR2	63753.9	81122.6	61877.7
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	FEAWLAEVEGR	FEAWLAEVEGR	2	FEAWLAEVEGR2	74099.9	76759.5	64314.4
A0A8I6ASC6	A0A8I6ASC6	A0A8I6ASC6_RAT	Igdcc4	Immunoglobulin superfamily, DCC subclass, member 4	1	FECHTEGLPAPIITWEK	FEC(UniMod:4)HTEGLPAPIITWEK	3	FEC(UniMod:4)HTEGLPAPIITWEK3	28017.2	22029	13715.7
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	FECNSGFK	FEC(UniMod:4)NSGFK	2	FEC(UniMod:4)NSGFK2	531137	475101	442508
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	FECQGPPSLAVQAK	FEC(UniMod:4)QGPPSLAVQAK	2	FEC(UniMod:4)QGPPSLAVQAK2	7303.4	14207.5	7084.82
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	FECQPGYR	FEC(UniMod:4)QPGYR	2	FEC(UniMod:4)QPGYR2	307937	387057	192634
P54645	P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	1	FECSEEEVLSCLYNR	FEC(UniMod:4)SEEEVLSC(UniMod:4)LYNR	2	FEC(UniMod:4)SEEEVLSC(UniMod:4)LYNR2	14836.2	14289.8	15081
P54645	P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	1	FECSEEEVLSCLYNR	FEC(UniMod:4)SEEEVLSC(UniMod:4)LYNR	3	FEC(UniMod:4)SEEEVLSC(UniMod:4)LYNR3	17607	9942.51	11539.6
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	FEDATVQSDMK	FEDATVQSDMK	2	FEDATVQSDMK2	68691.1	61397.4	68046.1
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	FEDAVEK	FEDAVEK	1	FEDAVEK1	2124.69	3859.86	1770.11
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	FEDAVEK	FEDAVEK	2	FEDAVEK2	372950	368930	276738
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	FEDAVEKFR	FEDAVEKFR	3	FEDAVEKFR3			7194.2
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	FEDDDQGPPAPPNPFSHLMEGELEEYTK	FEDDDQGPPAPPNPFSHLMEGELEEYTK	4	FEDDDQGPPAPPNPFSHLMEGELEEYTK4	1607.43	4198.59	3968.85
Q6DGG0	M0RB67;A0A8I6ADW5;A0A8I6AIC0;Q6DGG0;A0A8I5ZR77;A0A8I6AFJ6	PPID_RAT	Ppid	Peptidyl-prolyl cis-trans isomerase D	0	FEDENFHYK	FEDENFHYK	3	FEDENFHYK3	5908.93	4799.71	6821.22
P10111	A0A8I5Y1J2;A0A8I6A3L4;P10111;A0A8I6AP42;A0A8I6A629	PPIA_RAT	Ppia	Peptidyl-prolyl cis-trans isomerase A	0	FEDENFILK	FEDENFILK	2	FEDENFILK2	1.87909e+06	1.81843e+06	1.92134e+06
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	FEDFEPSDTR	FEDFEPSDTR	2	FEDFEPSDTR2	48903.3	41233.7	29778.2
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	FEDFLVSMENNR	FEDFLVSMENNR	2	FEDFLVSMENNR2	63414.2	70304.8	52831.6
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	FEDFLVSMENNR	FEDFLVSMENNR	3	FEDFLVSMENNR3	2883.69	4532.78	3336.58
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	FEDFLVSMENNRDK	FEDFLVSMENNRDK	3	FEDFLVSMENNRDK3	20220.1	21915.8	30086.9
P04906	P04906	GSTP1_RAT	Gstp1	Glutathione S-transferase P	1	FEDGDLTLYQSNAILR	FEDGDLTLYQSNAILR	2	FEDGDLTLYQSNAILR2	72763.3	55746.5	60278.5
P04906	P04906	GSTP1_RAT	Gstp1	Glutathione S-transferase P	1	FEDGDLTLYQSNAILR	FEDGDLTLYQSNAILR	3	FEDGDLTLYQSNAILR3	19419.5	19796.7	11658.1
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	FEDGVLDPDYPR	FEDGVLDPDYPR	2	FEDGVLDPDYPR2	589155	582994	565161
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	FEDGVLDPDYPR	FEDGVLDPDYPR	3	FEDGVLDPDYPR3	2.67786e+06	2.86872e+06	3.00599e+06
A0A8I5Y9V4	A0A8I5Y9V4	A0A8I5Y9V4_RAT	Cars1	cysteine--tRNA ligase	1	FEDHEGLPTVVK	FEDHEGLPTVVK	3	FEDHEGLPTVVK3	1880.72		
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	FEDKLPEDMAR	FEDKLPEDMAR	2	FEDKLPEDMAR2	3877.43	6785.25	5087.78
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	FEDKLPEDMAR	FEDKLPEDMAR	3	FEDKLPEDMAR3	48488.6	59755.6	44750.4
P04897	P04897	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	1	FEDLNKR	FEDLNKR	2	FEDLNKR2	16633.3		9109.82
A0A8I6A822	A0A8I6A822	A0A8I6A822_RAT	Tm9sf3	Transmembrane 9 superfamily member	1	FEDRFDK	FEDRFDK	2	FEDRFDK2	24313.1	16336.5	17248.6
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	FEDRLPEEMAR	FEDRLPEEMAR	3	FEDRLPEEMAR3	17015.9	23561.1	13370.9
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	FEDTSPAGER	FEDTSPAGER	2	FEDTSPAGER2	52104.7	45927	58712.7
A0A8I6GIU6	A0A8I6GIU6	A0A8I6GIU6_RAT	Tial1	Tia1 cytotoxic granule-associated RNA binding protein-like 1	1	FEDVVNQSSPK	FEDVVNQSSPK	2	FEDVVNQSSPK2	3881.02	7071.49	7648.89
D3ZTW9	D3ZTW9	D3ZTW9_RAT	Exog	Exo/endonuclease G	1	FEDVWIVSGPLTLPHTR	FEDVWIVSGPLTLPHTR	3	FEDVWIVSGPLTLPHTR3		1561.77	
Q9WVC0	A0A8I6AK28;Q9WVC0;A0A8I5ZW51;A0A8I6ARI4	SEPT7_RAT	Septin7	Septin-7	0	FEDYLNAESR	FEDYLNAESR	2	FEDYLNAESR2	123746	122592	128714
P36953	P36953	AFAM_RAT	Afm	Afamin	1	FEEAATTCCEQQQK	FEEAATTC(UniMod:4)C(UniMod:4)EQQQK	2	FEEAATTC(UniMod:4)C(UniMod:4)EQQQK2	92184.8	79484.9	55729.9
P36953	P36953	AFAM_RAT	Afm	Afamin	1	FEEAATTCCEQQQK	FEEAATTC(UniMod:4)C(UniMod:4)EQQQK	3	FEEAATTC(UniMod:4)C(UniMod:4)EQQQK3	13288.5	18571	18748.4
Q62796	Q62796;A0A096MJZ5	RBP1_RAT	Ralbp1	RalA-binding protein 1	0	FEEACGR	FEEAC(UniMod:4)GR	2	FEEAC(UniMod:4)GR2	11490.4	34710.6	29616.9
M0RCS2	M0RCS2	M0RCS2_RAT	Tbl2	Transducin (beta)-like 2	1	FEEASTMPCR	FEEASTMPC(UniMod:4)R	2	FEEASTMPC(UniMod:4)R2	9255.52	5613.48	8158.33
B0BNE3	B0BNE3	B0BNE3_RAT	Trappc5	Trafficking protein particle complex subunit 5	1	FEEAVIAR	FEEAVIAR	2	FEEAVIAR2	33519.5	49404.1	47097.1
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	FEECISQSAVK	FEEC(UniMod:4)ISQSAVK	2	FEEC(UniMod:4)ISQSAVK2	2870.71	1296.5	
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	FEEEFIK	FEEEFIK	1	FEEEFIK1	2791.48		1071.25
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	FEEEFIK	FEEEFIK	2	FEEEFIK2	127999	120997	141297
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	FEEFLQR	FEEFLQR	2	FEEFLQR2	313543	281693	285182
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	FEEFQEELTAR	FEEFQEELTAR	2	FEEFQEELTAR2	10054.4	5415.15	8951.35
B2GV14	B2GV14	B2GV14_RAT	Txlna	Taxilin alpha	1	FEEFQNTLSK	FEEFQNTLSK	2	FEEFQNTLSK2	6387.03	6524.91	6356.18
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	FEEFQTDLAAHEER	FEEFQTDLAAHEER	2	FEEFQTDLAAHEER2	19065	19114.8	24043.5
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	FEEFQTDLAAHEER	FEEFQTDLAAHEER	3	FEEFQTDLAAHEER3	329951	302779	363923
Q66HA4	Q66HA4	TAXB1_RAT	Tax1bp1	Tax1-binding protein 1 homolog	1	FEEHVESHWK	FEEHVESHWK	3	FEEHVESHWK3	11055.9	16132.6	7408.16
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	FEEHVQSVDIAAFNK	FEEHVQSVDIAAFNK	2	FEEHVQSVDIAAFNK2	6400.96	3463.09	8861.04
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	FEEHVQSVDIAAFNK	FEEHVQSVDIAAFNK	3	FEEHVQSVDIAAFNK3	103974	127442	105776
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	FEEHVQSVDIAAFNKI	FEEHVQSVDIAAFNKI	2	FEEHVQSVDIAAFNKI2	16832.8	9680.51	18534.7
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	FEEHVQSVDIAAFNKI	FEEHVQSVDIAAFNKI	3	FEEHVQSVDIAAFNKI3	295164	310894	394469
P00564	P00564	KCRM_RAT	Ckm	Creatine kinase M-type	1	FEEILTR	FEEILTR	2	FEEILTR2	22955.5	11757	18304.4
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	FEELENVLK	FEELENVLK	2	FEELENVLK2	25408.2	27162.5	31202.1
F7ETN7	F7ETN7	F7ETN7_RAT	B4galt7	Beta-1,4-galactosyltransferase	1	FEELLVFVPHMHR	FEELLVFVPHMHR	4	FEELLVFVPHMHR4	4460.99	7695.03	3515
P14659	P14659;A0A8I6AQL9;P63018;M0RCB1	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	0	FEELNADLFR	FEELNADLFR	2	FEELNADLFR2	629687	617269	568890
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	FEELNMDLFR	FEELNMDLFR	2	FEELNMDLFR2	2.61718e+06	2.50762e+06	2.48374e+06
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	FEELNMDLFR	FEELNMDLFR	3	FEELNMDLFR3	4449.69	4058.35	1612.04
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	FEELTNLIR	FEELTNLIR	2	FEELTNLIR2	27896.1	21174.3	26766.3
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	FEEMIAQIK	FEEMIAQIK	2	FEEMIAQIK2	398075	407229	458145
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	FEENAPAQSTGVR	FEENAPAQSTGVR	2	FEENAPAQSTGVR2	21266.2	17522.2	
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	FEEQDDFESEK	FEEQDDFESEK	2	FEEQDDFESEK2	6958.58	4393.08	8511.78
P70483	P70483	STRN_RAT	Strn	Striatin	1	FEESIHDVAFHPSK	FEESIHDVAFHPSK	2	FEESIHDVAFHPSK2	3066.49		
P70483	P70483	STRN_RAT	Strn	Striatin	1	FEESIHDVAFHPSK	FEESIHDVAFHPSK	3	FEESIHDVAFHPSK3	25459.3	19547.9	25685.9
P70483	P70483	STRN_RAT	Strn	Striatin	1	FEESIHDVAFHPSK	FEESIHDVAFHPSK	4	FEESIHDVAFHPSK4	101452	99235.4	112244
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	FEESMSEK	FEESMSEK	2	FEESMSEK2	95099.2	58340.5	84345.5
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	FEFEQDLSEK	FEFEQDLSEK	2	FEFEQDLSEK2	115156	103265	117595
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	FEFHYPNSDQAQK	FEFHYPNSDQAQK	3	FEFHYPNSDQAQK3	15860.7	7582.74	22178.4
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	FEFIGDAETDDER	FEFIGDAETDDER	2	FEFIGDAETDDER2	14917.8	10422.5	14856.2
Q5XIM0	Q5XIM0	Q5XIM0_RAT	Bcs1l	Mitochondrial chaperone BCS1	1	FEFIPSPGNHFIWYQGK	FEFIPSPGNHFIWYQGK	3	FEFIPSPGNHFIWYQGK3	35515.6	49856.2	39610.5
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	FEFIQDESGTGDKEFMGNQDNNSLK	FEFIQDESGTGDKEFMGNQDNNSLK	3	FEFIQDESGTGDKEFMGNQDNNSLK3	3553.63	4165.37	4377.49
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	FEFNQALGRPEK	FEFNQALGRPEK	3	FEFNQALGRPEK3	24181.7	23566.2	24378.5
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	FEFQPHMGDEVCQVSAQQPVQTELLMR	FEFQPHMGDEVC(UniMod:4)QVSAQQPVQTELLMR	4	FEFQPHMGDEVC(UniMod:4)QVSAQQPVQTELLMR4	8665.73	7071.28	9575.85
Q66H88	Q66H88	PLPP6_RAT	Plpp6	Polyisoprenoid diphosphate/phosphate phosphohydrolase PLPP6	1	FEFQSLLSCR	FEFQSLLSC(UniMod:4)R	2	FEFQSLLSC(UniMod:4)R2	3696.34	3781.47	4417.26
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	FEGAVYR	FEGAVYR	2	FEGAVYR2	25186		22593.9
A0A8I6AA08	A0A8I6AA08	A0A8I6AA08_RAT	Septin6	Septin	1	FEGEPTTHTQPGVQLR	FEGEPTTHTQPGVQLR	3	FEGEPTTHTQPGVQLR3	30913.2	32163.6	28641.9
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	FEGFIQTR	FEGFIQTR	2	FEGFIQTR2	63109.9	56390.2	53872.3
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	FEGGNRDLEHLSK	FEGGNRDLEHLSK	3	FEGGNRDLEHLSK3	111423	173342	176242
A0A8I6GM43	A0A8I6GM43	A0A8I6GM43_RAT	Pbdc1	Polysaccharide biosynthesis domain containing 1	1	FEGIVEDYNYGTLLR	FEGIVEDYNYGTLLR	2	FEGIVEDYNYGTLLR2	22027.5	20612.1	24096.5
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	FEGKFPQVSNFFEHTPPK	FEGKFPQVSNFFEHTPPK	3	FEGKFPQVSNFFEHTPPK3	79895.2	123496	133910
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	FEGKFPQVSNFFEHTPPK	FEGKFPQVSNFFEHTPPK	4	FEGKFPQVSNFFEHTPPK4	337238	432423	490572
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	FEGLSQQASTSSAK	FEGLSQQASTSSAK	2	FEGLSQQASTSSAK2	66367.4	67896.6	68336.4
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	FEGNCAEQDGSGWWMNK	FEGNC(UniMod:4)AEQDGSGWWMNK	3	FEGNC(UniMod:4)AEQDGSGWWMNK3	26586.4	21180	35146.6
F1LU48	F1LU48	F1LU48_RAT	Ergic1	Endoplasmic reticulum-Golgi intermediate compartment protein	1	FEGQFSINK	FEGQFSINK	2	FEGQFSINK2	42809.3	27066.1	52305
B1WBS4	B1WBS4	B1WBS4_RAT	Vps26b	VPS26 retromer complex component B	1	FEGTTSLGEVR	FEGTTSLGEVR	2	FEGTTSLGEVR2	8609.57	8759.12	8232.09
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	FEHLVTQMK	FEHLVTQMK	2	FEHLVTQMK2	27948.3	21812.3	31408.8
Q5PPI8	Q5PPI8	Q5PPI8_RAT	Rmc1	Regulator of MON1-CCZ1	1	FEIELPAAPK	FEIELPAAPK	2	FEIELPAAPK2	20798.2	25790.5	10116.5
A0A0G2K9L0;A0A8I5ZMB4	A0A8I5ZMB4;A0A0G2K9L0	A0A0G2K9L0_RAT;A0A8I5ZMB4_RAT	Rnaset2;Rnaset2-ps1	Ribonuclease T2	0	FEIKPSINYYQLADFK	FEIKPSINYYQLADFK	3	FEIKPSINYYQLADFK3	1806.89	5317.74	1879.12
Q8VII0	Q8VII0	FRMD6_RAT	Frmd6	FERM domain-containing protein 6 (Fragment)	1	FEILPDGLPSAR	FEILPDGLPSAR	2	FEILPDGLPSAR2	8907.9	23885.2	16340.9
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	FEINAYDPVIVQQLILSGDPSSGVDSR	FEINAYDPVIVQQLILSGDPSSGVDSR	3	FEINAYDPVIVQQLILSGDPSSGVDSR3	5241.66	5923.78	2716.37
Q32Q06	Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	1	FEIPYFTTSGIQVR	FEIPYFTTSGIQVR	2	FEIPYFTTSGIQVR2	121198	109106	142437
Q32Q06	Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	1	FEIPYFTTSGIQVR	FEIPYFTTSGIQVR	3	FEIPYFTTSGIQVR3	11691	15345.7	15141.9
F7FLB2	F7FLB2	F7FLB2_RAT	Pgm2	phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	1	FEISAVR	FEISAVR	2	FEISAVR2	58108.1	43042.7	36126.9
P67999	P67999	KS6B1_RAT	Rps6kb1	Ribosomal protein S6 kinase beta-1	1	FEISETSVNR	FEISETSVNR	2	FEISETSVNR2	6027.9	5645.48	
D3ZG43	D3ZG43	D3ZG43_RAT	Ndufs3	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial	1	FEIVYNLLSLR	FEIVYNLLSLR	2	FEIVYNLLSLR2	44387.2	22089.9	30482.1
M0RC99	A1L1J8;M0RC99;B0BNK1	RAB5A_RAT	Rab5a	Ras-related protein Rab-5A	0	FEIWDTAGQER	FEIWDTAGQER	2	FEIWDTAGQER2	291650	279392	286268
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	FEIWYNAR	FEIWYNAR	2	FEIWYNAR2	23734.9	30644.5	24720.5
Q6P6S0	Q6P6S0	SNP47_RAT	Snap47	Synaptosomal-associated protein 47	1	FEKEDVDDIK	FEKEDVDDIK	3	FEKEDVDDIK3	2973.97		
D3Z9C0	D3Z9C0	D3Z9C0_RAT	Mios	Meiosis regulator for oocyte development	1	FEKPVLTLTEQPKPLTK	FEKPVLTLTEQPKPLTK	4	FEKPVLTLTEQPKPLTK4	6576.29	7560.92	9846.79
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	FELALQLGELK	FELALQLGELK	2	FELALQLGELK2	56582.8	61575.3	42863.3
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	FELAVDAVHR	FELAVDAVHR	2	FELAVDAVHR2	2905.79	2295.51	4669.48
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	FELAVDAVHR	FELAVDAVHR	3	FELAVDAVHR3	15161.9	15251.2	11086.2
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	FELDSEQVR	FELDSEQVR	2	FELDSEQVR2	41479	47728.3	49552.7
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	FELDTSER	FELDTSER	2	FELDTSER2	352018	315084	319066
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	FELDTSERK	FELDTSERK	2	FELDTSERK2	11856.1	7508.85	9245.76
Q498S0	Q498S0	Q498S0_RAT	Chst12	Carbohydrate sulfotransferase	1	FELENEEFYR	FELENEEFYR	2	FELENEEFYR2	19358.8	11009.1	15395.2
Q498S0	Q498S0	Q498S0_RAT	Chst12	Carbohydrate sulfotransferase	1	FELENEEFYRK	FELENEEFYRK	3	FELENEEFYRK3	74490.8	75249.1	55475.2
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	FELFVMK	FELFVMK	2	FELFVMK2	64681.4	64413.4	74769.3
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	FELGSSSIAHMVMGTTNQFSTR	FELGSSSIAHMVMGTTNQFSTR	3	FELGSSSIAHMVMGTTNQFSTR3	14688.7	13624	11258
F1MAF8	F1MAF8	F1MAF8_RAT	Atg2b	Autophagy related 2B	1	FELHCSSDVVHIR	FELHC(UniMod:4)SSDVVHIR	4	FELHC(UniMod:4)SSDVVHIR4	2640.88	5478.2	3811.33
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	FELLEKDPYALDVPNTAFGR	FELLEKDPYALDVPNTAFGR	3	FELLEKDPYALDVPNTAFGR3	13981.7	19306.6	13994.1
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	FELLGCELHGCSEPLGLK	FELLGC(UniMod:4)ELHGC(UniMod:4)SEPLGLK	3	FELLGC(UniMod:4)ELHGC(UniMod:4)SEPLGLK3	68125.8	69090.7	74408.7
Q63663	Q63663	GBP2_RAT	Gbp2	Guanylate-binding protein 2	1	FELMMQQK	FELMMQQK	2	FELMMQQK2	34313.9	41020	34172.8
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	FELPHGSPQLVR	FELPHGSPQLVR	3	FELPHGSPQLVR3	46934.6	48789.6	59674.5
A1A5S1	A1A5S1	PRP6_RAT	Prpf6	Pre-mRNA-processing factor 6	1	FELQHGTEEQQEEVRK	FELQHGTEEQQEEVRK	4	FELQHGTEEQQEEVRK4	2895.84	944.798	
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	FELTGIPPAPR	FELTGIPPAPR	2	FELTGIPPAPR2	235494	201008	265366
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	FEMDTYAK	FEMDTYAK	2	FEMDTYAK2	323234	381083	327509
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	FEMDVYR	FEMDVYR	2	FEMDVYR2	100189	88824.3	120489
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	FEMTEQEK	FEMTEQEK	2	FEMTEQEK2	194791	205298	220327
A0A8I6GK77	A0A8I6GK77	A0A8I6GK77_RAT	Bcas3	BCAS3, microtubule associated cell migration factor	1	FENADLNDTSR	FENADLNDTSR	2	FENADLNDTSR2	7638.76	18150.2	10740.8
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	FENLGIQPPK	FENLGIQPPK	2	FENLGIQPPK2	82968.2	101778	135983
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	FENNELFAK	FENNELFAK	2	FENNELFAK2	32570.9	41638.6	56215.1
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	FENVQTLTDAIHDIILDMK	FENVQTLTDAIHDIILDMK	3	FENVQTLTDAIHDIILDMK3		3540.61	
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	FEPEYSQIK	FEPEYSQIK	2	FEPEYSQIK2	42217	40621.5	52863.1
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	FEPFSNK	FEPFSNK	1	FEPFSNK1	145849	185084	154106
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	FEPFSNK	FEPFSNK	2	FEPFSNK2	7.74314e+06	7.91649e+06	7.49426e+06
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	FEPFSNKGQTLVVQFTVK	FEPFSNKGQTLVVQFTVK	3	FEPFSNKGQTLVVQFTVK3	34415.6	29057.8	21469
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	FEPGQSHAGVVQYSHNQMQEHVDMR	FEPGQSHAGVVQYSHNQMQEHVDMR	4	FEPGQSHAGVVQYSHNQMQEHVDMR4	2771.01	1886.46	
Q63060	Q63060	GLPK_RAT	Gk	Glycerol kinase	1	FEPQINAEESEIR	FEPQINAEESEIR	2	FEPQINAEESEIR2	37746.3	33596.2	24352
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	FEPSSQMIEVQEGQNLR	FEPSSQMIEVQEGQNLR	3	FEPSSQMIEVQEGQNLR3	6548.39	12924.4	13100.8
Q9WTT7	Q9WTT7	5MP1_RAT	Bzw2	eIF5-mimic protein 1	1	FEPTVFR	FEPTVFR	2	FEPTVFR2	53180.3	83308.9	57330.8
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	FEPVPAQYVR	FEPVPAQYVR	2	FEPVPAQYVR2	175787	157925	143579
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	FEQAFYTYDTSSPSILTLTAIR	FEQAFYTYDTSSPSILTLTAIR	3	FEQAFYTYDTSSPSILTLTAIR3	7692.83	8655.82	7192.65
D3ZIT4	D3ZIT4	D3ZIT4_RAT	Anapc7	Anaphase promoting complex subunit 7	1	FEQAQMLDPYLIK	FEQAQMLDPYLIK	2	FEQAQMLDPYLIK2	3799.39	3974.25	3962.34
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	FEQEINAK	FEQEINAK	2	FEQEINAK2		13802.2	7863.2
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	FEQEMLSK	FEQEMLSK	2	FEQEMLSK2	7183.1		7103.88
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	FEQHTVR	FEQHTVR	2	FEQHTVR2			7623.21
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	FEQLELR	FEQLELR	2	FEQLELR2	330760	276736	253237
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	FEQLSESAK	FEQLSESAK	2	FEQLSESAK2	130922	118521	139818
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	FEQSASNFYQQQAEGHR	FEQSASNFYQQQAEGHR	3	FEQSASNFYQQQAEGHR3	2.71443e+06	2.95538e+06	2.93633e+06
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	FEQSASNFYQQQAEGHR	FEQSASNFYQQQAEGHR	4	FEQSASNFYQQQAEGHR4	9217.42		4392.26
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	FERDAFDTLFDHAPDK	FERDAFDTLFDHAPDK	3	FERDAFDTLFDHAPDK3	4210.58		12929.8
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	FERDAFDTLFDHAPDK	FERDAFDTLFDHAPDK	4	FERDAFDTLFDHAPDK4	13137.4	14425.8	15874.8
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	FESAFLSHVVSQHQSLLGNIR	FESAFLSHVVSQHQSLLGNIR	3	FESAFLSHVVSQHQSLLGNIR3	89158.9	98982	106071
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	FESAFLSHVVSQHQSLLGNIR	FESAFLSHVVSQHQSLLGNIR	4	FESAFLSHVVSQHQSLLGNIR4	678130	649574	697407
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	FESCSVPR	FESC(UniMod:4)SVPR	2	FESC(UniMod:4)SVPR2	420457	470695	435341
B3GNI6	B3GNI6	SEP11_RAT	Septin11	Septin-11	1	FESDPATHNEPGVR	FESDPATHNEPGVR	2	FESDPATHNEPGVR2	9338.89	10521.2	4104.47
B3GNI6	B3GNI6	SEP11_RAT	Septin11	Septin-11	1	FESDPATHNEPGVR	FESDPATHNEPGVR	3	FESDPATHNEPGVR3	445216	394992	443019
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	FESENTDSEIHCDR	FESENTDSEIHC(UniMod:4)DR	2	FESENTDSEIHC(UniMod:4)DR2	16023.1	20161.4	13754.4
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	FESENTDSEIHCDR	FESENTDSEIHC(UniMod:4)DR	3	FESENTDSEIHC(UniMod:4)DR3	509620	480107	532179
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	FESHGGGWGYSAHSVEAIR	FESHGGGWGYSAHSVEAIR	4	FESHGGGWGYSAHSVEAIR4	6522.01	5166.93	7677.07
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	FESLEPEMNNQASR	FESLEPEMNNQASR	2	FESLEPEMNNQASR2	738328	833038	783946
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	FESLEPEMNNQASR	FESLEPEMNNQASR	3	FESLEPEMNNQASR3	54892.4	55549.7	72497.1
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	FESLFPGK	FESLFPGK	1	FESLFPGK1	6940.18	6771.57	5130.46
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	FESLFPGK	FESLFPGK	2	FESLFPGK2	513959	634944	566322
F7F5Q9	F7F5Q9	F7F5Q9_RAT	Hcls1	Hematopoietic cell specific Lyn substrate 1	1	FESMAEEK	FESMAEEK	2	FESMAEEK2	329129	340361	354811
F7F5Q9	F7F5Q9	F7F5Q9_RAT	Hcls1	Hematopoietic cell specific Lyn substrate 1	1	FESMAEEKR	FESMAEEKR	2	FESMAEEKR2	2948.13	1840.21	4470.61
Q6AY86	Q6AY86	VP26A_RAT	Vps26a	Vacuolar protein sorting-associated protein 26A	1	FESPESQASAEQPEM	FESPESQASAEQPEM	2	FESPESQASAEQPEM2	27327.5	18919.3	22347.8
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	FESQPQSQEVTEGQTVK	FESQPQSQEVTEGQTVK	2	FESQPQSQEVTEGQTVK2	107584	89864.1	146675
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	FESQPQSQEVTEGQTVK	FESQPQSQEVTEGQTVK	3	FESQPQSQEVTEGQTVK3	31069.1	43774.3	47271.5
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	FESSFSHKPSLFNK	FESSFSHKPSLFNK	4	FESSFSHKPSLFNK4	4626.75	7660.27	4149.13
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	FESSGQDMFK	FESSGQDMFK	2	FESSGQDMFK2	15017.4	11067.1	18132.9
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	FESSSHAISMSAYLR	FESSSHAISMSAYLR	3	FESSSHAISMSAYLR3	12758.3		18548.1
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	FESWEDDQVPK	FESWEDDQVPK	2	FESWEDDQVPK2	13249.8	11475.5	13896.4
Q6IFU8	Q63279;Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	0	FETEQALR	FETEQALR	2	FETEQALR2	21245.6	12988.2	13614.5
B2RYI2	B2RYI2	B2RYI2_RAT	Srp68	Signal recognition particle subunit SRP68	1	FETFCLDPSLVTK	FETFC(UniMod:4)LDPSLVTK	2	FETFC(UniMod:4)LDPSLVTK2	7526.51		
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	FETPGIMQFTNEEK	FETPGIMQFTNEEK	2	FETPGIMQFTNEEK2	100533	106098	109673
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	FETPGIMQFTNEEKR	FETPGIMQFTNEEKR	3	FETPGIMQFTNEEKR3	80568	100901	90424.3
A0A0G2K2G7	A0A0G2K2G7	A0A0G2K2G7_RAT	Anks1a	Ankyrin repeat and sterile alpha motif domain containing 1A	1	FETPLDLAALYGR	FETPLDLAALYGR	2	FETPLDLAALYGR2	5270.07	5909.14	4238.28
A0A8I6GJ11	A0A8I6GJ11	A0A8I6GJ11_RAT	Acss2	propionate--CoA ligase	1	FETTYFK	FETTYFK	2	FETTYFK2	3657.6	3856.45	4212.54
A0A0G2K0G9	A0A0G2K0G9	A0A0G2K0G9_RAT	Rin3	Ras and Rab interactor 3	1	FEVAQPQDYR	FEVAQPQDYR	2	FEVAQPQDYR2	25568.6	29469.4	21512
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	FEVDQLSK	FEVDQLSK	2	FEVDQLSK2	6603.2	10505.1	12995.8
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	FEVGDIMLIR	FEVGDIMLIR	2	FEVGDIMLIR2	22965.2	31300.1	22209
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	FEVGPGAAVHSPLAAQNGFLR	FEVGPGAAVHSPLAAQNGFLR	3	FEVGPGAAVHSPLAAQNGFLR3	27518.5	27240.7	14570
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	FEVIEFDDGAGSVLR	FEVIEFDDGAGSVLR	2	FEVIEFDDGAGSVLR2	17101.2	15671.6	11823.5
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	FEVILPR	FEVILPR	2	FEVILPR2	18947.5	26128	19974.8
Q4KLL4	Q4KLL4	TM9S4_RAT	Tm9sf4	Transmembrane 9 superfamily member 4	1	FEVIPQSIR	FEVIPQSIR	2	FEVIPQSIR2	90021.1	103718	97220.5
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	FEVITNSR	FEVITNSR	2	FEVITNSR2	146494	93003.6	118896
P21571	P21571	ATP5J_RAT	Atp5pf	ATP synthase-coupling factor 6, mitochondrial	1	FEVLDKPQS	FEVLDKPQS	2	FEVLDKPQS2	424218	525227	460579
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	FEVLFCGR	FEVLFC(UniMod:4)GR	2	FEVLFC(UniMod:4)GR2	13065.1	12228.6	7986.34
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	FEVNPVLK	FEVNPVLK	2	FEVNPVLK2	230196	254224	207217
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	FEVNPVLKK	FEVNPVLKK	2	FEVNPVLKK2	8797.77	8382.58	
Q9ERR2	Q9ERR2	COMD5_RAT	Commd5	COMM domain-containing protein 5	1	FEVPIAK	FEVPIAK	2	FEVPIAK2	13129.4	10702.5	13507.2
Q3ZAU4	Q3ZAU4	Q3ZAU4_RAT	Kazald1	Kazal-type serine peptidase inhibitor domain 1	1	FEVTGWLQIQALRPSDEGTYR	FEVTGWLQIQALRPSDEGTYR	3	FEVTGWLQIQALRPSDEGTYR3	18646.1	6914.31	15124.6
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	FEVTLEK	FEVTLEK	2	FEVTLEK2	37865.3	20638.7	17120
Q9Z144	Q9Z144	LEG2_RAT	Lgals2	Galectin-2	1	FEVTNLNMK	FEVTNLNMK	2	FEVTNLNMK2	4187.24	6506	
A0A8I6A182	A0A8I6A182	A0A8I6A182_RAT	Pitpnc1	Phosphatidylinositol transfer protein, cytoplasmic 1	1	FEVWGLQTR	FEVWGLQTR	2	FEVWGLQTR2	23880.9	16050.2	20166.8
Q9QWJ9	Q9QWJ9	NRP1_RAT	Nrp1	Neuropilin-1	1	FEVYGCK	FEVYGC(UniMod:4)K	2	FEVYGC(UniMod:4)K2	23310.7	28966.4	23869.6
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	FEWDLPLDGTLR	FEWDLPLDGTLR	2	FEWDLPLDGTLR2	592303	532272	581720
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	FEWDLPLDGTLRR	FEWDLPLDGTLRR	3	FEWDLPLDGTLRR3	13879.3	14068.6	15906.1
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	FEYDEDVK	FEYDEDVK	2	FEYDEDVK2	215267	304188	292476
P18614	P18614	ITA1_RAT	Itga1	Integrin alpha-1	1	FEYQMSLEPIR	FEYQMSLEPIR	2	FEYQMSLEPIR2	7889.75	3216.52	7667.51
P15384	P63142;P10499;P19024;P15384	KCNA3_RAT	Kcna3	Potassium voltage-gated channel subfamily A member 3	0	FFACPSK	FFAC(UniMod:4)PSK	2	FFAC(UniMod:4)PSK2	32149.7	27731	25481.8
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	FFADLHFEEGWHMFLQSR	FFADLHFEEGWHMFLQSR	3	FFADLHFEEGWHMFLQSR3	7812.75	6677.08	3181.83
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	FFADLHFEEGWHMFLQSR	FFADLHFEEGWHMFLQSR	4	FFADLHFEEGWHMFLQSR4	54789.1	36156.6	27023.4
P27605	P27605	HPRT_RAT	Hprt1	Hypoxanthine-guanine phosphoribosyltransferase	1	FFADLLDYIK	FFADLLDYIK	2	FFADLLDYIK2	37261.6	32721.3	24977.8
P36953	P36953	AFAM_RAT	Afm	Afamin	1	FFAEFLYDYSR	FFAEFLYDYSR	2	FFAEFLYDYSR2	155609	124407	92166.9
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	FFALDDFTICYFK	FFALDDFTIC(UniMod:4)YFK	2	FFALDDFTIC(UniMod:4)YFK2	11904.4	10969.4	15530.2
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	FFALVNALDEHMFPVR	FFALVNALDEHMFPVR	3	FFALVNALDEHMFPVR3	16204.2	14241.2	13551.2
Q3B8R7	Q3B8R7	Q3B8R7_RAT	Mrpl47	Mitochondrial ribosomal protein L47	1	FFAMPYVDSFIR	FFAMPYVDSFIR	2	FFAMPYVDSFIR2	11301.8	9975	18169.9
P47196	P47196	AKT1_RAT	Akt1	RAC-alpha serine/threonine-protein kinase	1	FFANIVWQDVYEK	FFANIVWQDVYEK	2	FFANIVWQDVYEK2	6633.82	11947.7	12231.2
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	FFAPAILSPNLFQLTPHHTDPQTSR	FFAPAILSPNLFQLTPHHTDPQTSR	3	FFAPAILSPNLFQLTPHHTDPQTSR3	57599.8	35830.6	34220.5
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	FFAPAILSPNLFQLTPHHTDPQTSR	FFAPAILSPNLFQLTPHHTDPQTSR	4	FFAPAILSPNLFQLTPHHTDPQTSR4	400470	357635	361491
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	FFAPECGR	FFAPEC(UniMod:4)GR	2	FFAPEC(UniMod:4)GR2	189041	141886	152705
A0A8I6AHQ9	A0A8I6AHQ9	A0A8I6AHQ9_RAT	Xpot	Exportin-T	1	FFCFQVLEHQVK	FFC(UniMod:4)FQVLEHQVK	3	FFC(UniMod:4)FQVLEHQVK3	8560.02	4095.53	4991.7
A0A0G2K543	A0A0G2K543	A0A0G2K543_RAT	C2cd5	C2 calcium-dependent domain containing 5	1	FFCTTSIPK	FFC(UniMod:4)TTSIPK	2	FFC(UniMod:4)TTSIPK2	12237.9	17454.3	6394.98
Q66HR2	Q5XIT1;Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	0	FFDANYDGK	FFDANYDGK	2	FFDANYDGK2	980158	919474	991626
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	FFDANYDGKEYDPVAAR	FFDANYDGKEYDPVAAR	3	FFDANYDGKEYDPVAAR3	15704	14803.7	14153.3
F1LM66	F1LM66	F1LM66_RAT	Eftud2	116 kDa U5 small nuclear ribonucleoprotein component	1	FFDDPMLLELAK	FFDDPMLLELAK	2	FFDDPMLLELAK2	4707.4	6964.21	7107.61
Q07984	Q07984	SSRD_RAT	Ssr4	Translocon-associated protein subunit delta	1	FFDEESYSLLR	FFDEESYSLLR	2	FFDEESYSLLR2	190004	192871	195232
Q07984	Q07984	SSRD_RAT	Ssr4	Translocon-associated protein subunit delta	1	FFDEESYSLLRK	FFDEESYSLLRK	3	FFDEESYSLLRK3	8099.65	15658.3	8534.99
O35217	O35217	MINP1_RAT	Minpp1	Multiple inositol polyphosphate phosphatase 1	1	FFDHCEK	FFDHC(UniMod:4)EK	2	FFDHC(UniMod:4)EK2	5855.92		5226.49
D3ZD11	D3ZD11	D3ZD11_RAT	Spcs2	Signal peptidase complex subunit 2	1	FFDHSGTLVMDAYEPEISR	FFDHSGTLVMDAYEPEISR	3	FFDHSGTLVMDAYEPEISR3	334431	309396	322910
P11505	P11505	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	1	FFDIDSGR	FFDIDSGR	2	FFDIDSGR2	14445.6	7825.71	11572
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	FFDLFEK	FFDLFEK	2	FFDLFEK2	37793.2	39386.9	25319.7
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	FFDNPWGFQNRPEDTELPFSK	FFDNPWGFQNRPEDTELPFSK	3	FFDNPWGFQNRPEDTELPFSK3	9744.11	6385.68	5709.63
A0A0G2K9M5	A0A0G2K9M5	A0A0G2K9M5_RAT	Tbc1d8b	TBC1 domain family member 8B	1	FFDNVINK	FFDNVINK	2	FFDNVINK2	7103.79	6309.09	
P13721	P13721	SIAT1_RAT	St6gal1	Beta-galactoside alpha-2,6-sialyltransferase 1	1	FFDSACTMGAYHPLLFEK	FFDSAC(UniMod:4)TMGAYHPLLFEK	3	FFDSAC(UniMod:4)TMGAYHPLLFEK3	2305.47	1200.17	1800.85
A0A8I6ACK9	A0A8I6A0D0;A0A8I6ACK9	A0A8I6ACK9_RAT	Abcg3l3	ATP-binding cassette, subfamily G (WHITE), member 3-like 3	0	FFDSLTLVASGK	FFDSLTLVASGK	2	FFDSLTLVASGK2	12587.5	12450.6	8976.07
Q9QYM0	Q63120;Q9QYM0	MRP5_RAT	Abcc5	ATP-binding cassette sub-family C member 5	0	FFDTTPTGR	FFDTTPTGR	2	FFDTTPTGR2	7575.61	4139.36	5017.63
Q80W89	Q80W89	NDUAB_RAT	Ndufa11	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11	1	FFEAYNETPDGTQCHR	FFEAYNETPDGTQC(UniMod:4)HR	3	FFEAYNETPDGTQC(UniMod:4)HR3	33579.5	33329.3	38004
Q5Y4N8	Q5Y4N8	AGRE1_RAT	Adgre1	Adhesion G protein-coupled receptor E2	1	FFEDGQASWK	FFEDGQASWK	2	FFEDGQASWK2	6634.62	12687.3	9038.94
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	FFEDYGLFMR	FFEDYGLFMR	2	FFEDYGLFMR2	25599.8	21609.3	32519
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	FFEECDPNK	FFEEC(UniMod:4)DPNK	2	FFEEC(UniMod:4)DPNK2	40876.6	36715	37830.5
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	FFEECDPNKDK	FFEEC(UniMod:4)DPNKDK	2	FFEEC(UniMod:4)DPNKDK2	22442.9	18369.2	27940
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	FFEECDPNKDK	FFEEC(UniMod:4)DPNKDK	3	FFEEC(UniMod:4)DPNKDK3	382522	356361	468631
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	FFEECDPNKDKHITLK	FFEEC(UniMod:4)DPNKDKHITLK	4	FFEEC(UniMod:4)DPNKDKHITLK4	4335.87	3345.96	5876.31
P56932	P56932	2ABD_RAT	Ppp2r2d	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform	1	FFEEPEDPSSR	FFEEPEDPSSR	2	FFEEPEDPSSR2	14737.7	9473.85	7693.06
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	FFEEVNDPAK	FFEEVNDPAK	2	FFEEVNDPAK2	32205.3	27640.1	34168
F7FFW7	F7FFW7	F7FFW7_RAT	Atp6v0d1	ATPase H+ transporting V0 subunit D1	1	FFEHEVK	FFEHEVK	2	FFEHEVK2	8655.67	11281	6873.16
B2RYG6	B2RYG6	OTUB1_RAT	Otub1	Ubiquitin thioesterase OTUB1	1	FFEHFIEGGR	FFEHFIEGGR	2	FFEHFIEGGR2	8509.53	11443.6	3516.64
B2RYG6	B2RYG6	OTUB1_RAT	Otub1	Ubiquitin thioesterase OTUB1	1	FFEHFIEGGR	FFEHFIEGGR	3	FFEHFIEGGR3	71580	80981.5	71905.7
O35346	O35346	FAK1_RAT	Ptk2	Focal adhesion kinase 1	1	FFEILSPVYR	FFEILSPVYR	2	FFEILSPVYR2	12907.2	5167.74	5833.19
F1M8V2	F1M8V2	F1M8V2_RAT	Ube4b	Ubiquitin conjugation factor E4	1	FFEMIENHPLSTK	FFEMIENHPLSTK	2	FFEMIENHPLSTK2	1181.03	1895.42	
F1M8V2	F1M8V2	F1M8V2_RAT	Ube4b	Ubiquitin conjugation factor E4	1	FFEMIENHPLSTK	FFEMIENHPLSTK	3	FFEMIENHPLSTK3	8852.52	13614.4	11090.9
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	FFETASR	FFETASR	2	FFETASR2	113092	118775	122830
P16975	P16975	SPRC_RAT	Sparc	SPARC	1	FFETCDLDNDK	FFETC(UniMod:4)DLDNDK	2	FFETC(UniMod:4)DLDNDK2	162155	121082	139104
P35281	P35281;P35286	RAB10_RAT	Rab10	Ras-related protein Rab-10	0	FFETSAK	FFETSAK	1	FFETSAK1	12577.7	10346.8	13821
P35281	P35281;P35286	RAB10_RAT	Rab10	Ras-related protein Rab-10	0	FFETSAK	FFETSAK	2	FFETSAK2	1.18385e+06	1.22489e+06	1.29331e+06
P61314	P61314;A0A8I5ZY58;A0A8I6A471	RL15_RAT	Rpl15	Large ribosomal subunit protein eL15	0	FFEVILIDPFHK	FFEVILIDPFHK	2	FFEVILIDPFHK2	8889.28	8702.58	9027.21
P61314	P61314;A0A8I5ZY58;A0A8I6A471	RL15_RAT	Rpl15	Large ribosomal subunit protein eL15	0	FFEVILIDPFHK	FFEVILIDPFHK	3	FFEVILIDPFHK3	12383.5	9700.38	15642.9
Q769K2	Q769K2	NAPEP_RAT	Napepld	N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D	1	FFFAGDTGYCPAFEEIGKR	FFFAGDTGYC(UniMod:4)PAFEEIGKR	3	FFFAGDTGYC(UniMod:4)PAFEEIGKR3	23428.4	39581.6	32143.3
Q6IE70	Q6IE70	PAN2_RAT	Pan2	PAN2-PAN3 deadenylation complex catalytic subunit Pan2	1	FFFCGHTSGK	FFFC(UniMod:4)GHTSGK	3	FFFC(UniMod:4)GHTSGK3	12339	11134.2	
Q68A21	Q68A21	PURB_RAT	Purb	Transcriptional activator protein Pur-beta	1	FFFDVGCNK	FFFDVGC(UniMod:4)NK	2	FFFDVGC(UniMod:4)NK2	51427.1	54271.1	61730.1
P86252	P86252	PURA_RAT	Pura	Transcriptional activator protein Pur-alpha	1	FFFDVGSNK	FFFDVGSNK	2	FFFDVGSNK2	249445	220596	233613
Q9R1J8	Q9R1J8	P3H1_RAT	P3h1	Prolyl 3-hydroxylase 1	1	FFGALLR	FFGALLR	2	FFGALLR2	10572.6	8963.72	
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	FFGGCVPEMVLTHDDR	FFGGC(UniMod:4)VPEMVLTHDDR	3	FFGGC(UniMod:4)VPEMVLTHDDR3	4113.19		1960.6
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	FFGGCVPEMVLTHDDRR	FFGGC(UniMod:4)VPEMVLTHDDRR	4	FFGGC(UniMod:4)VPEMVLTHDDRR4	47504.3	23605.3	29326.8
D4A471	D4A471	D4A471_RAT	Cmc2	COX assembly mitochondrial protein	1	FFGHCNDLDR	FFGHC(UniMod:4)NDLDR	3	FFGHC(UniMod:4)NDLDR3	6682.56	10150.5	
P33436	P33436	MMP2_RAT	Mmp2	72 kDa type IV collagenase	1	FFGLPQTGDLDQNTIETMR	FFGLPQTGDLDQNTIETMR	3	FFGLPQTGDLDQNTIETMR3	3022.02	4707.06	4892.11
G3V8G2	G3V8G2	G3V8G2_RAT	Psmd5	26S proteasome non-ATPase regulatory subunit 5	1	FFGNLAVMDSPQQICER	FFGNLAVMDSPQQIC(UniMod:4)ER	3	FFGNLAVMDSPQQIC(UniMod:4)ER3	7498.86	9548.4	5468.74
P38652	P38652	PGM1_RAT	Pgm1	Phosphoglucomutase-1	1	FFGNLMDASK	FFGNLMDASK	2	FFGNLMDASK2	22154.7	10157.7	14988.7
Q8CG45	Q8CG45	ARK72_RAT	Akr7a2	Aflatoxin B1 aldehyde reductase member 2	1	FFGNSWSETYR	FFGNSWSETYR	2	FFGNSWSETYR2	10504.8	9099.66	7735.22
O88377	O88377	PI42B_RAT	Pip4k2b	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta	1	FFGPGEFDPSVDVYAMK	FFGPGEFDPSVDVYAMK	2	FFGPGEFDPSVDVYAMK2	99127.2	105844	92193.4
O88377	O88377	PI42B_RAT	Pip4k2b	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta	1	FFGPGEFDPSVDVYAMK	FFGPGEFDPSVDVYAMK	3	FFGPGEFDPSVDVYAMK3	7441.08	3304.14	3425.56
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	FFHENEIWFR	FFHENEIWFR	2	FFHENEIWFR2	38274.1	45309.9	26941.2
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	FFHENEIWFR	FFHENEIWFR	3	FFHENEIWFR3	516802	507887	519997
D4A3V2	D4A3V2	D4A3V2_RAT	Ndufa6	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6	1	FFHETETPRPK	FFHETETPRPK	3	FFHETETPRPK3	25622.7	37692.1	22846.8
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	FFHHCQLIQSGSK	FFHHC(UniMod:4)QLIQSGSK	3	FFHHC(UniMod:4)QLIQSGSK3	1904.12	2367.07	
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	FFHLAFEEEFGR	FFHLAFEEEFGR	2	FFHLAFEEEFGR2	10276.6	11124.6	4016.32
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	FFHLAFEEEFGR	FFHLAFEEEFGR	3	FFHLAFEEEFGR3	48692.4	37636.2	39646.5
P17164	P17164	FUCO_RAT	Fuca1	Tissue alpha-L-fucosidase	1	FFHPEEWADLFQAAGAK	FFHPEEWADLFQAAGAK	3	FFHPEEWADLFQAAGAK3	5302.68	4862.66	6416.27
Q02353	Q02353	NDST1_RAT	Ndst1	Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1	1	FFHTGTDAEDAGDDLLLSYVK	FFHTGTDAEDAGDDLLLSYVK	3	FFHTGTDAEDAGDDLLLSYVK3		4064.72	5393.24
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	FFIDQSK	FFIDQSK	2	FFIDQSK2	73514.3	64883.9	71166.1
A6Y7S3	A6Y7S3;A0A8I6A7D3;A0A8I6A6D0	A6Y7S3_RAT	Kctd8	Potassium channel tetramerization domain containing 8	0	FFIDRDGFLFR	FFIDRDGFLFR	3	FFIDRDGFLFR3		18036.3	
P18645	P18645	GALE_RAT	Gale	UDP-glucose 4-epimerase	1	FFIEEMIQDLCR	FFIEEMIQDLC(UniMod:4)R	2	FFIEEMIQDLC(UniMod:4)R2	2054.93	2191.89	
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	FFIEFYSTCLEEYKK	FFIEFYSTC(UniMod:4)LEEYKK	3	FFIEFYSTC(UniMod:4)LEEYKK3	5007.96		
Q9ERE6	Q9ERE6	MPRIP_RAT	Mprip	Myosin phosphatase Rho-interacting protein	1	FFILYEHGLLR	FFILYEHGLLR	3	FFILYEHGLLR3	5283.1	2457.44	
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	FFIQNVFR	FFIQNVFR	2	FFIQNVFR2	15526.1	14881.7	26598.9
Q62867	Q62867	GGH_RAT	Ggh	Gamma-glutamyl hydrolase	1	FFISEALK	FFISEALK	2	FFISEALK2	23226.5	13567.3	21888.9
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	FFISYAIPDVSK	FFISYAIPDVSK	2	FFISYAIPDVSK2	7895.44	9440.64	18094.8
D3ZXB7	D3ZXB7	D3ZXB7_RAT	Krt71	Keratin 71	1	FFKCLFEAEMAQIQSHISDMSVILSMDNNR	FFKC(UniMod:4)LFEAEMAQIQSHISDMSVILSMDNNR	4	FFKC(UniMod:4)LFEAEMAQIQSHISDMSVILSMDNNR4	37350.2		3728.77
P01026	P01026	CO3_RAT	C3	Complement C3	1	FFKPAMPFDLMVFVTNPDGSPAR	FFKPAMPFDLMVFVTNPDGSPAR	3	FFKPAMPFDLMVFVTNPDGSPAR3	609869	524826	450767
P01026	P01026	CO3_RAT	C3	Complement C3	1	FFKPAMPFDLMVFVTNPDGSPAR	FFKPAMPFDLMVFVTNPDGSPAR	4	FFKPAMPFDLMVFVTNPDGSPAR4	35739.3	40117.5	27607.9
D3ZZC1	D3ZZC1	D3ZZC1_RAT	Txndc5	protein disulfide-isomerase	1	FFKPGQEAVK	FFKPGQEAVK	3	FFKPGQEAVK3	70009.4	49734	57185.9
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	FFLCQVAGDAK	FFLC(UniMod:4)QVAGDAK	2	FFLC(UniMod:4)QVAGDAK2	1.67045e+06	1.79951e+06	1.81749e+06
A0A8I5Y7I2	A0A8I5Y7I2	A0A8I5Y7I2_RAT	Kctd12	Potassium channel tetramerization domain containing 12	1	FFLDRDGFLFR	FFLDRDGFLFR	3	FFLDRDGFLFR3	18762.8		18286.9
Q9QXY4	Q9QXY4	OGFR_RAT	Ogfr	Opioid growth factor receptor	1	FFLEETLVQHK	FFLEETLVQHK	2	FFLEETLVQHK2	7637.36	4881.77	1758.3
Q9QXY4	Q9QXY4	OGFR_RAT	Ogfr	Opioid growth factor receptor	1	FFLEETLVQHK	FFLEETLVQHK	3	FFLEETLVQHK3	33254	48627.6	21261.1
Q02563	Q02563	SV2A_RAT	Sv2a	Synaptic vesicle glycoprotein 2A	1	FFLENGK	FFLENGK	2	FFLENGK2		17359	20349.2
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	FFLLYLHRPGPQYGLPVDGCIGR	FFLLYLHRPGPQYGLPVDGC(UniMod:4)IGR	4	FFLLYLHRPGPQYGLPVDGC(UniMod:4)IGR4	5197.6	6920.2	4702.39
M0R4M1	M0R4M1	M0R4M1_RAT	Nlrc5	NLR family, CARD domain containing 5	1	FFLPTLDPDCSNEAPISEVTHHQLNR	FFLPTLDPDC(UniMod:4)SNEAPISEVTHHQLNR	4	FFLPTLDPDC(UniMod:4)SNEAPISEVTHHQLNR4	6282.44		
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	FFLQDPR	FFLQDPR	2	FFLQDPR2	485407	483332	549702
Q5XIP9	Q5XIP9	TMM43_RAT	Tmem43	Transmembrane protein 43	1	FFLSAGLIDK	FFLSAGLIDK	2	FFLSAGLIDK2	97547.5	86874.1	86971.6
P39052	P39052;Q08877	DYN2_RAT	Dnm2	Dynamin-2	0	FFLSHPAYR	FFLSHPAYR	2	FFLSHPAYR2	21283.5	20948.9	14032.6
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	FFLYGLSQGTR	FFLYGLSQGTR	2	FFLYGLSQGTR2	697044	828538	755391
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	FFMGTVVK	FFMGTVVK	2	FFMGTVVK2	169616	186176	177817
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	FFMNVCGDTK	FFMNVC(UniMod:4)GDTK	2	FFMNVC(UniMod:4)GDTK2	38355.5	47188.6	32494.4
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	FFNEDGVIRPYR	FFNEDGVIRPYR	3	FFNEDGVIRPYR3	198455	271828	221993
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	FFNEEVDSR	FFNEEVDSR	2	FFNEEVDSR2	16918.9	13072.1	24633.7
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	FFNEEVDSRK	FFNEEVDSRK	3	FFNEEVDSRK3	20838.4	12276.6	28893.1
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	FFNEVFR	FFNEVFR	2	FFNEVFR2	108089	64701.8	83532
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	FFNHLSAVSESIQALGWVALAAK	FFNHLSAVSESIQALGWVALAAK	3	FFNHLSAVSESIQALGWVALAAK3	103174	75411.1	88500.5
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	FFNHLSAVSESIQALGWVALAAK	FFNHLSAVSESIQALGWVALAAK	4	FFNHLSAVSESIQALGWVALAAK4	15805.3	8437.16	5153.99
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	FFNHLSAVSESIQALGWVALAAKPGPFVK	FFNHLSAVSESIQALGWVALAAKPGPFVK	4	FFNHLSAVSESIQALGWVALAAKPGPFVK4	18050.4	26850.6	23765.9
Q62867	Q62867	GGH_RAT	Ggh	Gamma-glutamyl hydrolase	1	FFNILTVNTDGK	FFNILTVNTDGK	2	FFNILTVNTDGK2	14692.8	11806.3	6465.29
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	FFNIPFLQLQR	FFNIPFLQLQR	2	FFNIPFLQLQR2	24317.2	26053.1	32419.3
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	FFNQNIMSYITAK	FFNQNIMSYITAK	2	FFNQNIMSYITAK2	8922.58	10365	21434.5
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	FFNSANVLQGFQMHTR	FFNSANVLQGFQMHTR	3	FFNSANVLQGFQMHTR3	10839.5	7392.95	14781
F1MAG1	F1MAG1	F1MAG1_RAT	Agrp	Agouti related neuropeptide	1	FFNTFCYCR	FFNTFC(UniMod:4)YC(UniMod:4)R	2	FFNTFC(UniMod:4)YC(UniMod:4)R2	8832.57	9275.31	1198.59
A0A8I6A6G8	A0A8I6A6G8	A0A8I6A6G8_RAT	Hm13	Histocompatibility minor 13	1	FFPANFPNR	FFPANFPNR	2	FFPANFPNR2	91900.4	89350.9	72410.4
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	FFPASADR	FFPASADR	2	FFPASADR2	275166	1.58378e+06	445694
P80254	P80254	DOPD_RAT	Ddt	D-dopachrome decarboxylase	1	FFPLEPWQIGK	FFPLEPWQIGK	2	FFPLEPWQIGK2	50315.1	29176.2	42623.7
Q7TP21	Q7TP21	Q7TP21_RAT	Rpa1	Replication protein A subunit	1	FFPLIEVNK	FFPLIEVNK	2	FFPLIEVNK2	13433.9	5662.64	
M0R915	M0R915;A0A8I6GLQ4	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	0	FFPNCVFLQTLK	FFPNC(UniMod:4)VFLQTLK	2	FFPNC(UniMod:4)VFLQTLK2	76214.9	96832.4	69112.5
Q64591	Q64591	DECR_RAT	Decr1	2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], mitochondrial	1	FFPPILKPMLPPNAFQGK	FFPPILKPMLPPNAFQGK	3	FFPPILKPMLPPNAFQGK3	28557.5	24743.7	28359.7
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	FFQAACDVPELQDK	FFQAAC(UniMod:4)DVPELQDK	2	FFQAAC(UniMod:4)DVPELQDK2	15261.4	18820.9	4407.6
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	FFQEENTEK	FFQEENTEK	2	FFQEENTEK2	119608	90514.5	113504
P15650	P15650	ACADL_RAT	Acadl	Long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	FFQEEVIPYHEEWEK	FFQEEVIPYHEEWEK	3	FFQEEVIPYHEEWEK3	64604.6	93103.4	74948.2
A0A8I6AE36	A0A8I6AE36;Q9QYU1	A0A8I6AE36_RAT	ENSRNOG00000067472	Peroxisomal biogenesis factor 19	0	FFQELFDSELASQATAEFEK	FFQELFDSELASQATAEFEK	3	FFQELFDSELASQATAEFEK3	17580.7		20715.4
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	FFQELPTLDPAFK	FFQELPTLDPAFK	2	FFQELPTLDPAFK2	69544.9	88860	88412
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	FFQELSK	FFQELSK	2	FFQELSK2	187488	213011	184571
D4ADT5	D4ADT5	D4ADT5_RAT	Rig1	RNA helicase	1	FFQIQNR	FFQIQNR	2	FFQIQNR2	9516.14	4513.93	9958.98
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	FFQLAAQWPTHVK	FFQLAAQWPTHVK	2	FFQLAAQWPTHVK2	7894.7	7882.39	14715.3
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	FFQLAAQWPTHVK	FFQLAAQWPTHVK	3	FFQLAAQWPTHVK3	55775.3	55762.9	59472.4
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	FFQLCSDNVWGVR	FFQLC(UniMod:4)SDNVWGVR	2	FFQLC(UniMod:4)SDNVWGVR2	10920.6	13243.5	13587.6
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	FFQLQMCEYLLK	FFQLQMC(UniMod:4)EYLLK	2	FFQLQMC(UniMod:4)EYLLK2	7642.45	6206.77	12582.1
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	FFQPTEMAAQDFFQR	FFQPTEMAAQDFFQR	2	FFQPTEMAAQDFFQR2	24013.8	24938.1	30192
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	FFQPTEMAAQDFFQR	FFQPTEMAAQDFFQR	3	FFQPTEMAAQDFFQR3	8618	8056.35	8297.85
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	FFQPTEMASQDFFQR	FFQPTEMASQDFFQR	2	FFQPTEMASQDFFQR2	22849.8	24970.7	19217
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	FFQPTEMASQDFFQR	FFQPTEMASQDFFQR	3	FFQPTEMASQDFFQR3	8964.21	4485.36	6097.42
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	FFQQAHEWVDEGCAR	FFQQAHEWVDEGC(UniMod:4)AR	3	FFQQAHEWVDEGC(UniMod:4)AR3	6692.9	3605.68	9039.59
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	FFQSPSHVNLLK	FFQSPSHVNLLK	3	FFQSPSHVNLLK3	9491.5	14218.3	10461.8
A0A8I6ABE7	A0A8I6ABE7	A0A8I6ABE7_RAT	Xpr1	Xenotropic and polytropic retrovirus receptor 1	1	FFQTCEK	FFQTC(UniMod:4)EK	2	FFQTC(UniMod:4)EK2	6892.28	2711.97	
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	FFQTQIK	FFQTQIK	2	FFQTQIK2	91672.3	111197	115242
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	FFQVGLVSWGLFDPCHGSSNK	FFQVGLVSWGLFDPC(UniMod:4)HGSSNK	3	FFQVGLVSWGLFDPC(UniMod:4)HGSSNK3	10947	11342.1	10462
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	FFRPENTTVSAR	FFRPENTTVSAR	3	FFRPENTTVSAR3	70855.4	55879.8	60289.3
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	FFRPENTTVSARPSVEQLSNLIK	FFRPENTTVSARPSVEQLSNLIK	4	FFRPENTTVSARPSVEQLSNLIK4	12784.4	19407.4	22116.7
P0C5E3	P0C5E3	PALLD_RAT	Palld	Palladin (Fragment)	1	FFRPHFLQAPGDLTVQEGK	FFRPHFLQAPGDLTVQEGK	4	FFRPHFLQAPGDLTVQEGK4	7701.01	1695.25	5178.86
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	FFSFIEGCLVK	FFSFIEGC(UniMod:4)LVK	2	FFSFIEGC(UniMod:4)LVK2	26257.4	30686.8	34110.5
Q9JIK1	Q9JIK1	CDHR5_RAT	Cdhr5	Cadherin-related family member 5	1	FFSLVGINSPALK	FFSLVGINSPALK	2	FFSLVGINSPALK2	18620.8	6879.13	5579.06
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	FFTDNVPALVQGFHAAPQDVKPNYLK	FFTDNVPALVQGFHAAPQDVKPNYLK	4	FFTDNVPALVQGFHAAPQDVKPNYLK4	15426.6	13771.2	14984.8
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	FFTEILR	FFTEILR	2	FFTEILR2	53919.5	56872.6	57876.1
D3ZG57	D3ZG57	D3ZG57_RAT	Tor4a	Torsin family 4, member A	1	FFTFDSLTELSSR	FFTFDSLTELSSR	2	FFTFDSLTELSSR2	17832.6	18121.5	22407.2
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	FFTGQITAAGK	FFTGQITAAGK	2	FFTGQITAAGK2	117358	117440	108231
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	FFTHEPQDIHHFSPMGFPHK	FFTHEPQDIHHFSPMGFPHK	3	FFTHEPQDIHHFSPMGFPHK3	386428	375505	248530
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	FFTHEPQDIHHFSPMGFPHK	FFTHEPQDIHHFSPMGFPHK	4	FFTHEPQDIHHFSPMGFPHK4	2.35844e+06	2.38819e+06	2.02225e+06
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	FFTHEPQDIHHFSPMGFPHKR	FFTHEPQDIHHFSPMGFPHKR	4	FFTHEPQDIHHFSPMGFPHKR4	13192.2	8464.2	8311.63
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	FFTHGWAGWR	FFTHGWAGWR	3	FFTHGWAGWR3	10800.9	23375.2	
F1MAH6	F1MAH6	F1MAH6_RAT	Cdh11	Cadherin 11	1	FFTINPEDGFIK	FFTINPEDGFIK	2	FFTINPEDGFIK2	19896.9	15995.9	15769.3
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	FFTLCHSLESQVTFPIR	FFTLC(UniMod:4)HSLESQVTFPIR	3	FFTLC(UniMod:4)HSLESQVTFPIR3	26172.6	23860.2	27778.8
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	FFTPPSCWSR	FFTPPSC(UniMod:4)WSR	2	FFTPPSC(UniMod:4)WSR2	25261.4	20717.1	27019.1
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	FFTSHNGMHFSTWDNDNDK	FFTSHNGMHFSTWDNDNDK	3	FFTSHNGMHFSTWDNDNDK3	142595	126718	126432
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	FFTSHNGMHFSTWDNDNDK	FFTSHNGMHFSTWDNDNDK	4	FFTSHNGMHFSTWDNDNDK4	767627	781010	702931
G3V7P2	G3V7P2	G3V7P2_RAT	Fgl2	Fibrinogen-like 2	1	FFTTPDR	FFTTPDR	2	FFTTPDR2	344910	244497	286943
G3V7P2	G3V7P2	G3V7P2_RAT	Fgl2	Fibrinogen-like 2	1	FFTTPDRDNDR	FFTTPDRDNDR	3	FFTTPDRDNDR3	367906	314723	301903
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	FFTYGNFPLEDHLK	FFTYGNFPLEDHLK	3	FFTYGNFPLEDHLK3		11549.3	
A0A8I6AIH6	A0A8I6AIH6	A0A8I6AIH6_RAT	Suclg2	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial	1	FFVASTAK	FFVASTAK	2	FFVASTAK2	201925	225827	188427
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	FFVAVPGQVVSPQSSSSGADLTADK	FFVAVPGQVVSPQSSSSGADLTADK	3	FFVAVPGQVVSPQSSSSGADLTADK3	16915.8	14162.1	20177.9
P80386	P80386	AAKB1_RAT	Prkab1	5'-AMP-activated protein kinase subunit beta-1	1	FFVDGQWTHDPSEPIVTSQLGTVNNIIQVK	FFVDGQWTHDPSEPIVTSQLGTVNNIIQVK	4	FFVDGQWTHDPSEPIVTSQLGTVNNIIQVK4	1866.81	6168.38	4856.73
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	FFVENLNHDAIVVR	FFVENLNHDAIVVR	3	FFVENLNHDAIVVR3	14188.7	13510.8	19412.3
P48500	A0A0G2JWU1;A0A8I5ZVI4;P48500	TPIS_RAT	Tpi1	Triosephosphate isomerase	0	FFVGGNWK	FFVGGNWK	2	FFVGGNWK2	321727	305940	351586
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	FFVGPEDAEINAGNYR	FFVGPEDAEINAGNYR	2	FFVGPEDAEINAGNYR2	7268.61	3494.7	10634.1
D4A2N2	D4A2N2	D4A2N2_RAT	Inpp5b	phosphoinositide 5-phosphatase	1	FFVGTYNVNGQSPK	FFVGTYNVNGQSPK	2	FFVGTYNVNGQSPK2	3471.15	2240.9	6195.16
P32089	P32089	TXTP_RAT	Slc25a1	Tricarboxylate transport protein, mitochondrial	1	FFVMTSLR	FFVMTSLR	2	FFVMTSLR2	84634.7	56973.6	47211
Q99N37	Q99N37	RHG17_RAT	Arhgap17	Rho GTPase-activating protein 17	1	FFVTLLEAQADYHR	FFVTLLEAQADYHR	3	FFVTLLEAQADYHR3	1576.37	6874.93	4496.26
P19999	P19999	MBL1_RAT	Mbl1	Mannose-binding protein A	1	FFVTNHER	FFVTNHER	2	FFVTNHER2	107523	105459	93730.6
A0A8I6GK77	A0A8I6GK77	A0A8I6GK77_RAT	Bcas3	BCAS3, microtubule associated cell migration factor	1	FFVTSCYPCPGPNMNPIALGSR	FFVTSC(UniMod:4)YPC(UniMod:4)PGPNMNPIALGSR	3	FFVTSC(UniMod:4)YPC(UniMod:4)PGPNMNPIALGSR3		5887.82	
G3V912	G3V912	G3V912_RAT	Tmx4	Thioredoxin-related transmembrane protein 4	1	FFVTTLPAFFHAK	FFVTTLPAFFHAK	3	FFVTTLPAFFHAK3	73626.5	57586.7	76452.6
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	FFVVDCR	FFVVDC(UniMod:4)R	2	FFVVDC(UniMod:4)R2	21467	10505.8	17515.9
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	FFWEMAEEEGWIR	FFWEMAEEEGWIR	2	FFWEMAEEEGWIR2	95636.8	64775.3	89350.4
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	FFWEMAEEEGWIR	FFWEMAEEEGWIR	3	FFWEMAEEEGWIR3	1779.37	4317.28	5025.81
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	FFWEMDEAESWIK	FFWEMDEAESWIK	2	FFWEMDEAESWIK2	6114.96	10130.5	9525.12
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	FFWEMDEAESWIKEK	FFWEMDEAESWIKEK	3	FFWEMDEAESWIKEK3		6723.98	3878.28
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	FFWGNAETLK	FFWGNAETLK	2	FFWGNAETLK2	80783.4	90350.8	86101.1
O35397	O35397	CASP6_RAT	Casp6	Caspase-6	1	FFWHLALPER	FFWHLALPER	3	FFWHLALPER3	30447.4	35078.4	14626.9
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	FFWIQNVSLK	FFWIQNVSLK	2	FFWIQNVSLK2	2084.03	4160.45	2332.31
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	FFYAGTPPAGLATEAHVR	FFYAGTPPAGLATEAHVR	2	FFYAGTPPAGLATEAHVR2	62377	50107.8	39451.9
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	FFYAGTPPAGLATEAHVR	FFYAGTPPAGLATEAHVR	3	FFYAGTPPAGLATEAHVR3	939557	951687	942386
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	FFYQFLLGNER	FFYQFLLGNER	2	FFYQFLLGNER2	12374.2	22587.7	12101.5
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	FFYSDQNVDSR	FFYSDQNVDSR	2	FFYSDQNVDSR2	604065	516964	502973
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	FFYSDQNVDSRDPVQLNLLYVQAR	FFYSDQNVDSRDPVQLNLLYVQAR	3	FFYSDQNVDSRDPVQLNLLYVQAR3	167727	187337	135005
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	FFYSDQNVDSRDPVQLNLLYVQAR	FFYSDQNVDSRDPVQLNLLYVQAR	4	FFYSDQNVDSRDPVQLNLLYVQAR4	41792.5	43775.7	37129.1
O55158	O55158	O55158_RAT	Tspan8	Tetraspanin	1	FGAADWGKNFPDAK	FGAADWGKNFPDAK	3	FGAADWGKNFPDAK3	39175.2	41048.1	22259.1
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	FGAAVLGNHTTR	FGAAVLGNHTTR	3	FGAAVLGNHTTR3	3921.64	1805.4	5904.78
D4A6U4	D4A6U4	D4A6U4_RAT	Tecpr2	Tectonin beta-propeller repeat containing 2	1	FGACFIPGLCK	FGAC(UniMod:4)FIPGLC(UniMod:4)K	2	FGAC(UniMod:4)FIPGLC(UniMod:4)K2	8903.56	11824.7	9273.72
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	FGAILAQGILDAGGHNVTISLQSR	FGAILAQGILDAGGHNVTISLQSR	3	FGAILAQGILDAGGHNVTISLQSR3	53707.9	46118.2	54607.9
A0A8I5ZQQ3	A0A8I5ZQQ3	A0A8I5ZQQ3_RAT	Pdpr	Pyruvate dehydrogenase phosphatase regulatory subunit	1	FGALQGSR	FGALQGSR	2	FGALQGSR2	9227.08	9625.08	13915.9
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	FGALSCWLDDSSTEHK	FGALSC(UniMod:4)WLDDSSTEHK	3	FGALSC(UniMod:4)WLDDSSTEHK3		8875.73	
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	FGALSCWLDDSSTEHKGPVQVIQVK	FGALSC(UniMod:4)WLDDSSTEHKGPVQVIQVK	4	FGALSC(UniMod:4)WLDDSSTEHKGPVQVIQVK4	7614.8	8934.57	
Q9QYL8	Q9QYL8	LYPA2_RAT	Lypla2	Acyl-protein thioesterase 2	1	FGALTAEK	FGALTAEK	2	FGALTAEK2	54332.2	53133.4	35795.7
P70500	P70500	CDIPT_RAT	Cdipt	CDP-diacylglycerol--inositol 3-phosphatidyltransferase	1	FGAMLDMLTDR	FGAMLDMLTDR	2	FGAMLDMLTDR2	48738.6	52480	49227.2
P15429	M0R5J4;P15429;A0A8I6GJ97;P04764;P07323;A0A8I5YC61	ENOB_RAT	Eno3	Beta-enolase	0	FGANAILGVSLAVCK	FGANAILGVSLAVC(UniMod:4)K	2	FGANAILGVSLAVC(UniMod:4)K2	14952.5	7714.41	17736.6
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	FGAPHTSENYSK	FGAPHTSENYSK	3	FGAPHTSENYSK3	37268.9	34811.8	38017.2
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	FGAPPHAGGGIGLER	FGAPPHAGGGIGLER	3	FGAPPHAGGGIGLER3	102038	86784.6	95633.5
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	FGAQLQCVTGSQLAPGQVALEISYGGSR	FGAQLQC(UniMod:4)VTGSQLAPGQVALEISYGGSR	3	FGAQLQC(UniMod:4)VTGSQLAPGQVALEISYGGSR3	9441.58	14897.1	11365.5
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	FGAQNEEMLPSILVLLK	FGAQNEEMLPSILVLLK	2	FGAQNEEMLPSILVLLK2			19577.7
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	FGAQNESLLPSILVLLQR	FGAQNESLLPSILVLLQR	3	FGAQNESLLPSILVLLQR3	5043.22		
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	FGATLEIVTDK	FGATLEIVTDK	2	FGATLEIVTDK2	58065.7	91414.9	67099
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	FGATLEIVTDKSQEGSQFVK	FGATLEIVTDKSQEGSQFVK	3	FGATLEIVTDKSQEGSQFVK3	7073.72	6235.51	6147.17
D4AE56	D4AE56	D4AE56_RAT	Ptges2	Prostaglandin E synthase 2	1	FGAVEATMAK	FGAVEATMAK	2	FGAVEATMAK2	8681.76	6642.81	9140.24
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	FGAVFLWDTGSSVGEITGHNK	FGAVFLWDTGSSVGEITGHNK	3	FGAVFLWDTGSSVGEITGHNK3	241260	191528	220634
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	FGAVWTGDNTAEWDHLK	FGAVWTGDNTAEWDHLK	2	FGAVWTGDNTAEWDHLK2	25756	23510.9	17668.4
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	FGAVWTGDNTAEWDHLK	FGAVWTGDNTAEWDHLK	3	FGAVWTGDNTAEWDHLK3	209765	265558	245280
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	FGAYIVDGLR	FGAYIVDGLR	2	FGAYIVDGLR2	13649.3	14698.9	15584.5
Q66HF6	Q66HF6	Q66HF6_RAT	Tinag	Tubulointerstitial nephritis antigen	1	FGCCEAR	FGC(UniMod:4)C(UniMod:4)EAR	2	FGC(UniMod:4)C(UniMod:4)EAR2	7522.88	2467.24	
A0A8I6AD67	A0A8I6AD67	A0A8I6AD67_RAT	Parp9	Poly [ADP-ribose] polymerase	1	FGCICTLR	FGC(UniMod:4)IC(UniMod:4)TLR	2	FGC(UniMod:4)IC(UniMod:4)TLR2	7363.64	13499.1	10118.4
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	FGCSFNNGGCQQDCFEGGDGSFR	FGC(UniMod:4)SFNNGGC(UniMod:4)QQDC(UniMod:4)FEGGDGSFR	3	FGC(UniMod:4)SFNNGGC(UniMod:4)QQDC(UniMod:4)FEGGDGSFR3	7636.58	2595.02	3762.36
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	FGDAIQTK	FGDAIQTK	2	FGDAIQTK2	29396.8	42959.3	40079.5
A0A8I6GJ11	A0A8I6GJ11	A0A8I6GJ11_RAT	Acss2	propionate--CoA ligase	1	FGDDPVTK	FGDDPVTK	2	FGDDPVTK2	5928.07	4027.56	5395.91
Q9Z1Z1	Q9Z1Z1	E2AK3_RAT	Eif2ak3	Eukaryotic translation initiation factor 2-alpha kinase 3	1	FGDDVVLVGGK	FGDDVVLVGGK	2	FGDDVVLVGGK2	7621.9	7229.27	9891.77
G3V7N0	G3V7N0	G3V7N0_RAT	Hs2st1	Heparan sulfate 2-O-sulfotransferase 1	1	FGDDYRPGLR	FGDDYRPGLR	3	FGDDYRPGLR3	45041	41228.7	
D3ZY47	D3ZY47	D3ZY47_RAT	C19h1orf198	Similar to RIKEN cDNA 2310022B05	1	FGDEDITWQDEHSAPFSWETR	FGDEDITWQDEHSAPFSWETR	3	FGDEDITWQDEHSAPFSWETR3	5304.48	4989.6	3941
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	FGDEFLGELR	FGDEFLGELR	2	FGDEFLGELR2	492463	452589	472728
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	FGDILHVINASDDEWWQAR	FGDILHVINASDDEWWQAR	3	FGDILHVINASDDEWWQAR3		3615.29	3101.12
A0A8I6A829	A0A8I6A829;A0A0G2K3H2;A0A8I6ANH8	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	0	FGDLDEQEFVYK	FGDLDEQEFVYK	2	FGDLDEQEFVYK2	6645.89	9147.42	5467.97
A0A8I6A829	A0A8I6A829;A0A0G2K3H2	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	0	FGDLDEQEFVYKEPAITK	FGDLDEQEFVYKEPAITK	3	FGDLDEQEFVYKEPAITK3	53995.7	73657.8	67135.6
P11517	P11517	HBB2_RAT		Hemoglobin subunit beta-2	1	FGDLSSASAIMGNPQVK	FGDLSSASAIMGNPQVK	2	FGDLSSASAIMGNPQVK2	101762	122184	90043.2
P11517	P11517	HBB2_RAT		Hemoglobin subunit beta-2	1	FGDLSSASAIMGNPQVK	FGDLSSASAIMGNPQVK	3	FGDLSSASAIMGNPQVK3	52348.4	65522.4	51727.7
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	FGDPECQVILPLLK	FGDPEC(UniMod:4)QVILPLLK	2	FGDPEC(UniMod:4)QVILPLLK2	20579.3	20338.4	9998.4
Q9JI92	Q9JI92	SDCB1_RAT	Sdcbp	Syntenin-1	1	FGDQVLQINGENCAGWSSDK	FGDQVLQINGENC(UniMod:4)AGWSSDK	3	FGDQVLQINGENC(UniMod:4)AGWSSDK3	4538.39	1721.46	3088.86
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	FGDSNTVMR	FGDSNTVMR	2	FGDSNTVMR2	39289.8	16651.9	43549
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	FGDSQQLR	FGDSQQLR	2	FGDSQQLR2	37177.7	37904.4	45651.9
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	FGDYQCNSAMGISQMLK	FGDYQC(UniMod:4)NSAMGISQMLK	2	FGDYQC(UniMod:4)NSAMGISQMLK2	16642.1	15203	18958.5
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	FGDYQCNSAMGISQMLK	FGDYQC(UniMod:4)NSAMGISQMLK	3	FGDYQC(UniMod:4)NSAMGISQMLK3	6366.69	11891.9	9134.18
F7EWF8	F7EWF8	F7EWF8_RAT	Anapc2	Anaphase-promoting complex subunit 2	1	FGEAPMHFCEVMLK	FGEAPMHFC(UniMod:4)EVMLK	3	FGEAPMHFC(UniMod:4)EVMLK3	15854.5	14747.4	16196.1
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	FGEDVLEVIK	FGEDVLEVIK	2	FGEDVLEVIK2	43922.1	37520.5	37668.4
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	FGEEIAR	FGEEIAR	2	FGEEIAR2	59399.1	49759.9	61926.1
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	FGEGIIITTHDK	FGEGIIITTHDK	3	FGEGIIITTHDK3	6110.8	8421.59	4240.87
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	FGEGMPHLQ	FGEGMPHLQ	2	FGEGMPHLQ2	25788	46763.9	33858.7
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	FGEITNEAVGFLGK	FGEITNEAVGFLGK	2	FGEITNEAVGFLGK2	37722.7	28941.9	37224.9
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	FGEITNEAVGFLGK	FGEITNEAVGFLGK	3	FGEITNEAVGFLGK3	3938.58		
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	FGELALTK	FGELALTK	2	FGELALTK2	207440	217977	239247
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	FGELGGFAAIQAK	FGELGGFAAIQAK	2	FGELGGFAAIQAK2	48730.7	70324.6	54640.5
D3ZHR2	D3ZHR2	ABCD1_RAT	Abcd1	ATP-binding cassette sub-family D member 1	1	FGELVAEEAR	FGELVAEEAR	2	FGELVAEEAR2	19737.7	10650.4	15709.3
B2RYD7	B2RYD7	B2RYD7_RAT	Stt3b	dolichyl-diphosphooligosaccharide--protein glycotransferase	1	FGEMQLDFR	FGEMQLDFR	2	FGEMQLDFR2	91244.1	90463	81870.4
P25093	P25093	FAAA_RAT	Fah	Fumarylacetoacetase	1	FGEPIPISK	FGEPIPISK	2	FGEPIPISK2	6074.05	4339.21	4131.66
D3ZRC4	D3ZRC4	PLPL8_RAT	Pnpla8	Calcium-independent phospholipase A2-gamma	1	FGESFYFLANHINSYFK	FGESFYFLANHINSYFK	3	FGESFYFLANHINSYFK3	3176.63		
Q60GF7	Q60GF7	PIGX_RAT	Pigx	Phosphatidylinositol-glycan biosynthesis class X protein	1	FGESIEDLQTCR	FGESIEDLQTC(UniMod:4)R	2	FGESIEDLQTC(UniMod:4)R2	7908.89	7448.41	5748.63
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	FGETLPK	FGETLPK	2	FGETLPK2	69859.8	70007.9	53826.1
Q4KLJ8	Q4KLJ8	PDCL3_RAT	Pdcl3	Phosducin-like protein 3	1	FGEVLEISGK	FGEVLEISGK	2	FGEVLEISGK2	107581	139672	100996
Q3SWU3	Q3SWU3;Q9QX81	HNRDL_RAT	Hnrnpdl	Heterogeneous nuclear ribonucleoprotein D-like	0	FGEVVDCTIK	FGEVVDC(UniMod:4)TIK	2	FGEVVDC(UniMod:4)TIK2	5695.45		6010.32
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	FGEWVDVVVDDR	FGEWVDVVVDDR	2	FGEWVDVVVDDR2	9192.2	5609.03	
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	FGEWVDVVVDDRLPTVNNQLIYCHSNSK	FGEWVDVVVDDRLPTVNNQLIYC(UniMod:4)HSNSK	4	FGEWVDVVVDDRLPTVNNQLIYC(UniMod:4)HSNSK4	41955.6	32853.9	29943.6
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	FGEYCSGEDGK	FGEYC(UniMod:4)SGEDGK	2	FGEYC(UniMod:4)SGEDGK2	91878.8	77447.9	65085.5
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	FGEYCSGEDGKGR	FGEYC(UniMod:4)SGEDGKGR	2	FGEYC(UniMod:4)SGEDGKGR2	2292.14	1817.39	1932.11
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	FGEYCSGEDGKGR	FGEYC(UniMod:4)SGEDGKGR	3	FGEYC(UniMod:4)SGEDGKGR3	58589.6	66642.1	51683.4
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	FGEYDFFVIISATR	FGEYDFFVIISATR	2	FGEYDFFVIISATR2		4116.24	
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	FGFCPMAAHEEICTTNEGVMYR	FGFC(UniMod:4)PMAAHEEIC(UniMod:4)TTNEGVMYR	3	FGFC(UniMod:4)PMAAHEEIC(UniMod:4)TTNEGVMYR3	1.82847e+07	25779.7	2.20139e+07
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	FGFCPMAAHEEICTTNEGVMYR	FGFC(UniMod:4)PMAAHEEIC(UniMod:4)TTNEGVMYR	4	FGFC(UniMod:4)PMAAHEEIC(UniMod:4)TTNEGVMYR4	258972	337482	369514
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	FGFDWESGR	FGFDWESGR	2	FGFDWESGR2	31736.8	44485.5	30257
A0A8I5ZQ10	A0A8I5ZQ10	A0A8I5ZQ10_RAT	Naa50	N(alpha)-acetyltransferase 50, NatE catalytic subunit	1	FGFEIIETK	FGFEIIETK	2	FGFEIIETK2	4303.19		
A0A8I5ZQ10	A0A8I5ZQ10	A0A8I5ZQ10_RAT	Naa50	N(alpha)-acetyltransferase 50, NatE catalytic subunit	1	FGFEIIETKK	FGFEIIETKK	3	FGFEIIETKK3	879.944	4036.27	1906.65
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	FGFFNLQEENQK	FGFFNLQEENQK	2	FGFFNLQEENQK2	27530.5	21187.9	21182.9
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	FGFGFGGTGK	FGFGFGGTGK	2	FGFGFGGTGK2	30555.5	19037.4	17096.6
P28840	P28840	NEC1_RAT	Pcsk1	Neuroendocrine convertase 1	1	FGFGLLNAK	FGFGLLNAK	2	FGFGLLNAK2	9099.6	6512.55	14998.2
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	FGFIVIDGSGALFGTLQGNTR	FGFIVIDGSGALFGTLQGNTR	3	FGFIVIDGSGALFGTLQGNTR3	6350.82	7896.96	6043.31
A0A8I6AXD4	A0A8I6AXD4	A0A8I6AXD4_RAT	Usp6nl	USP6 N-terminal like	1	FGFLHEEELPYPNAAADR	FGFLHEEELPYPNAAADR	3	FGFLHEEELPYPNAAADR3	8499.6	7229.42	8756.24
D4ACC1	D4ACC1	D4ACC1_RAT	Dapp1	Dual adaptor of phosphotyrosine and 3-phosphoinositides 1	1	FGFNEYSSLK	FGFNEYSSLK	2	FGFNEYSSLK2	11478.3	7935.6	7926.08
P62909	P62909	RS3_RAT	Rps3	Small ribosomal subunit protein uS3	1	FGFPEGSVELYAEK	FGFPEGSVELYAEK	2	FGFPEGSVELYAEK2	48907	29526.3	31970.2
Q68FS8	Q68FS8	Q68FS8_RAT	Rtca	RNA 3'-terminal-phosphate cyclase (ATP)	1	FGFTFNCDIK	FGFTFNC(UniMod:4)DIK	2	FGFTFNC(UniMod:4)DIK2	9278.47	12909.4	14742.5
P16036	P16036	S25A3_RAT	Slc25a3	Solute carrier family 25 member 3	1	FGFYEVFK	FGFYEVFK	2	FGFYEVFK2	74125.2	87934.7	63058.1
Q68A21	Q68A21	PURB_RAT	Purb	Transcriptional activator protein Pur-beta	1	FGGAFCR	FGGAFC(UniMod:4)R	2	FGGAFC(UniMod:4)R2	631333	632082	643381
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	FGGALDAAAK	FGGALDAAAK	2	FGGALDAAAK2	33174.9	34536.5	31643.4
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	FGGGSVELLK	FGGGSVELLK	2	FGGGSVELLK2	320381	311290	284624
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	FGGLAAGEDNGQR	FGGLAAGEDNGQR	2	FGGLAAGEDNGQR2	4839.46	4020.43	1946.39
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	FGGNCVCR	FGGNC(UniMod:4)VC(UniMod:4)R	2	FGGNC(UniMod:4)VC(UniMod:4)R2	44281	36780.1	32866.2
A0A8I6GLU8	A0A8I6GLU8	A0A8I6GLU8_RAT	Tardbp	TAR DNA-binding protein 43	1	FGGNPGGFGNQGGFGNSR	FGGNPGGFGNQGGFGNSR	2	FGGNPGGFGNQGGFGNSR2	15251.9	13077.1	9035.16
D3Z8X6	D3Z8X6	D3Z8X6_RAT	Dtx3l	E3 ubiquitin-protein ligase	1	FGGPSNFGYPDPDYLK	FGGPSNFGYPDPDYLK	2	FGGPSNFGYPDPDYLK2	5307.55	3455.17	7840.02
B5DF91	B5DF91	ELAV1_RAT	Elavl1	ELAV-like protein 1	1	FGGPVHHQAQR	FGGPVHHQAQR	3	FGGPVHHQAQR3			21129.2
Q566R2	Q566R2	TM2D2_RAT	Tm2d2	TM2 domain-containing protein 2	1	FGGQAYSDVEHTAVQCR	FGGQAYSDVEHTAVQC(UniMod:4)R	3	FGGQAYSDVEHTAVQC(UniMod:4)R3	5546.78	2829.96	5360.64
B0BNI5	B0BNI5	OLFL3_RAT	Olfml3	Olfactomedin-like protein 3	1	FGGSAGLWTK	FGGSAGLWTK	2	FGGSAGLWTK2	18390.6	18025.6	18766.4
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	FGGSGSQVDSAR	FGGSGSQVDSAR	2	FGGSGSQVDSAR2	94347.1	107385	99584.8
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	FGGTICSGDIWDK	FGGTIC(UniMod:4)SGDIWDK	2	FGGTIC(UniMod:4)SGDIWDK2	55261.3	68288.4	60398.9
Q27W02	Q27W02;F1M0X6	MGN_RAT	Magoh	Protein mago nashi homolog	0	FGHEFLEFEFRPDGK	FGHEFLEFEFRPDGK	4	FGHEFLEFEFRPDGK4	8270.08	8373.53	8107.81
P86252	P86252	PURA_RAT	Pura	Transcriptional activator protein Pur-alpha	1	FGHTFCK	FGHTFC(UniMod:4)K	1	FGHTFC(UniMod:4)K1	2315.93	2667.85	
P86252	P86252	PURA_RAT	Pura	Transcriptional activator protein Pur-alpha	1	FGHTFCK	FGHTFC(UniMod:4)K	2	FGHTFC(UniMod:4)K2	20306	27848.2	48568.2
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	FGHTLINPLLYR	FGHTLINPLLYR	2	FGHTLINPLLYR2	3092.89	909.907	812.814
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	FGHTLINPLLYR	FGHTLINPLLYR	3	FGHTLINPLLYR3	72390.8	68019.9	72772.1
A1L1K3	A1L1K3	APC5_RAT	Anapc5	Anaphase-promoting complex subunit 5	1	FGHYQQAELALQEAIR	FGHYQQAELALQEAIR	3	FGHYQQAELALQEAIR3	11534.2	8300.32	
F1M086	F1M086	F1M086_RAT	Elp4	Elongator complex protein 4	1	FGHYYDVSR	FGHYYDVSR	3	FGHYYDVSR3	8868.35	5772.76	10755.3
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	FGIAVLGYLNR	FGIAVLGYLNR	2	FGIAVLGYLNR2	238865	262964	250011
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	FGIDDQDFQNSLTR	FGIDDQDFQNSLTR	2	FGIDDQDFQNSLTR2	87737.2	99825.5	84815.3
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	FGIDDQDFQNSLTR	FGIDDQDFQNSLTR	3	FGIDDQDFQNSLTR3	13348.6	24017.6	20972.6
O88377	O88377	PI42B_RAT	Pip4k2b	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta	1	FGIDDQDYQNSVTR	FGIDDQDYQNSVTR	2	FGIDDQDYQNSVTR2	78753.6	64586.6	70851.9
Q64617	Q64617	KPCL_RAT	Prkch	Protein kinase C eta type	1	FGIDNFEFIR	FGIDNFEFIR	2	FGIDNFEFIR2		5830.3	1824.72
F7EYK0	F7EYK0	F7EYK0_RAT	Fkbp5	peptidylprolyl isomerase	1	FGIEPNAELMYEVTLK	FGIEPNAELMYEVTLK	2	FGIEPNAELMYEVTLK2	11637.1	9859.66	8352.76
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	FGIHPVAGR	FGIHPVAGR	2	FGIHPVAGR2	21331.3	21905.3	18797.2
P05426	A0A8I5ZP24;P05426;F1LUE9	RL7_RAT	Rpl7	Large ribosomal subunit protein uL30	0	FGIICMEDLIHEIYTVGK	FGIIC(UniMod:4)MEDLIHEIYTVGK	3	FGIIC(UniMod:4)MEDLIHEIYTVGK3	11104.5	8112.17	17671.7
A0A0G2QC40	A0A0G2QC40	A0A0G2QC40_RAT	Mkrn1	RING-type E3 ubiquitin transferase	1	FGILSNCNHTYCLK	FGILSNC(UniMod:4)NHTYC(UniMod:4)LK	3	FGILSNC(UniMod:4)NHTYC(UniMod:4)LK3	30198.3	38844.8	34401.3
P97829	P97829	CD47_RAT	Cd47	Leukocyte surface antigen CD47	1	FGILTLK	FGILTLK	2	FGILTLK2	66383.7	46982.6	71314.7
P40112	P40112;A0A8I6A926	PSB3_RAT	Psmb3	Proteasome subunit beta type-3	0	FGIQAQMVTTDFQK	FGIQAQMVTTDFQK	2	FGIQAQMVTTDFQK2	1.32177e+06	1.27394e+06	1.28786e+06
P40112	P40112;A0A8I6A926	PSB3_RAT	Psmb3	Proteasome subunit beta type-3	0	FGIQAQMVTTDFQK	FGIQAQMVTTDFQK	3	FGIQAQMVTTDFQK3	105296	103035	90939.8
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	FGIQEER	FGIQEER	2	FGIQEER2	57238.3	76781.3	68677.7
D4A1R8	D4A1R8;D3ZLA3	CPNE1_RAT	Cpne1	Copine-1	0	FGIYDIDNK	FGIYDIDNK	2	FGIYDIDNK2	48299.9	55839.2	62648.1
Q6BBI8	Q6BBI8	UFC1_RAT	Ufc1	Ubiquitin-fold modifier-conjugating enzyme 1	1	FGLAHLMALGLGPWLAVEVPDLIQK	FGLAHLMALGLGPWLAVEVPDLIQK	3	FGLAHLMALGLGPWLAVEVPDLIQK3	2576.11	13447.4	
P67779	P67779	PHB1_RAT	Phb1	Prohibitin 1	1	FGLALAVAGGVVNSALYNVDAGHR	FGLALAVAGGVVNSALYNVDAGHR	3	FGLALAVAGGVVNSALYNVDAGHR3	17495.8	20177.5	29710.5
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	FGLCAYTSQGR	FGLC(UniMod:4)AYTSQGR	2	FGLC(UniMod:4)AYTSQGR2	56441.2	83814	72151.1
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	FGLDHYQCDCTR	FGLDHYQC(UniMod:4)DC(UniMod:4)TR	2	FGLDHYQC(UniMod:4)DC(UniMod:4)TR2	34384.6	28127.9	21892.2
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	FGLDHYQCDCTR	FGLDHYQC(UniMod:4)DC(UniMod:4)TR	3	FGLDHYQC(UniMod:4)DC(UniMod:4)TR3	696760	633858	765907
Q9EQX6	Q9EQX6	PDGFC_RAT	Pdgfc	Platelet-derived growth factor C	1	FGLEDPEDDLCK	FGLEDPEDDLC(UniMod:4)K	2	FGLEDPEDDLC(UniMod:4)K2	54872	53386.9	44315.6
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	FGLEGCEVLIPALK	FGLEGC(UniMod:4)EVLIPALK	2	FGLEGC(UniMod:4)EVLIPALK2	41783.3	37405	41351.8
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	FGLEGCEVLIPALK	FGLEGC(UniMod:4)EVLIPALK	3	FGLEGC(UniMod:4)EVLIPALK3	788.08	870.036	2827.82
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	FGLESHAHTIQICK	FGLESHAHTIQIC(UniMod:4)K	2	FGLESHAHTIQIC(UniMod:4)K2	1195.45	3482.65	
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	FGLESHAHTIQICK	FGLESHAHTIQIC(UniMod:4)K	3	FGLESHAHTIQIC(UniMod:4)K3	63090.7	64062.2	56365.3
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	FGLESHAHTIQICK	FGLESHAHTIQIC(UniMod:4)K	4	FGLESHAHTIQIC(UniMod:4)K4	27066.3	38169.8	24666.9
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	FGLFAPIHK	FGLFAPIHK	2	FGLFAPIHK2	77204	73013.3	76491.1
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	FGLFSAETK	FGLFSAETK	2	FGLFSAETK2	20985.5	21986	19579.9
Q3B7D0	Q3B7D0	HEM6_RAT	Cpox	Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial	1	FGLFTPGSR	FGLFTPGSR	2	FGLFTPGSR2	16602.6	20556.9	20731.5
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	FGLGQSGR	FGLGQSGR	2	FGLGQSGR2	40864.3	41224.3	46237.9
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	FGLGSIAGAVGATAVYPIDLVK	FGLGSIAGAVGATAVYPIDLVK	3	FGLGSIAGAVGATAVYPIDLVK3	25086.5	31620.9	40051.1
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	FGLKPYTSFQEFTGEK	FGLKPYTSFQEFTGEK	2	FGLKPYTSFQEFTGEK2	70585	48815.7	57752.6
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	FGLKPYTSFQEFTGEK	FGLKPYTSFQEFTGEK	3	FGLKPYTSFQEFTGEK3	74907.5	75834.5	89722.1
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	FGLLPLSMTSTR	FGLLPLSMTSTR	2	FGLLPLSMTSTR2	63711.6	71923.3	74416.9
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	FGLNHNTGLISILEPIK	FGLNHNTGLISILEPIK	3	FGLNHNTGLISILEPIK3	18015	22709.4	21155.3
Q9QYP2	Q9QYP2	CELR2_RAT	Celsr2	Cadherin EGF LAG seven-pass G-type receptor 2 (Fragment)	1	FGLPAAAPCPK	FGLPAAAPC(UniMod:4)PK	2	FGLPAAAPC(UniMod:4)PK2	9427.85	5301.01	4552.81
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	FGLPDSR	FGLPDSR	2	FGLPDSR2	105359	71154.9	92584.9
P05982	P05982	NQO1_RAT	Nqo1	NAD(P)H dehydrogenase [quinone] 1	1	FGLSVGHHLGK	FGLSVGHHLGK	3	FGLSVGHHLGK3	19267.5	8600.96	
F1M332	F1M332	F1M332_RAT	Arhgap28	Rho GTPase activating protein 28	1	FGLTETGDLSAEDMKK	FGLTETGDLSAEDMKK	3	FGLTETGDLSAEDMKK3	7623.3	5026.85	3039.46
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	FGLVCVNR	FGLVC(UniMod:4)VNR	2	FGLVC(UniMod:4)VNR2	430248	362374	385069
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	FGLYLPK	FGLYLPK	2	FGLYLPK2	120271	105088	120889
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	FGLYLPLFK	FGLYLPLFK	2	FGLYLPLFK2	16680	11935.3	15591.3
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	FGLYLPLFKPSASTSK	FGLYLPLFKPSASTSK	2	FGLYLPLFKPSASTSK2	8496.53	9393.33	4517.71
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	FGLYLPLFKPSASTSK	FGLYLPLFKPSASTSK	3	FGLYLPLFKPSASTSK3	60972.6	58560.2	83128.4
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	FGLYSDQMR	FGLYSDQMR	2	FGLYSDQMR2	281343	244042	287502
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	FGLYSDQMRENLAQR	FGLYSDQMRENLAQR	3	FGLYSDQMRENLAQR3	327552	338482	350901
P32089	P32089	TXTP_RAT	Slc25a1	Tricarboxylate transport protein, mitochondrial	1	FGMFEFLSNHMR	FGMFEFLSNHMR	2	FGMFEFLSNHMR2	9247.91	6908.53	3587.96
P32089	P32089	TXTP_RAT	Slc25a1	Tricarboxylate transport protein, mitochondrial	1	FGMFEFLSNHMR	FGMFEFLSNHMR	3	FGMFEFLSNHMR3	26170.2	25763.5	28521
D3ZPA1	D3ZPA1	D3ZPA1_RAT	Gcc1	GRIP and coiled-coil domain containing 1	1	FGMNFGGGPSK	FGMNFGGGPSK	2	FGMNFGGGPSK2	6671.43	6109.01	
D3ZMA2	D3ZMA2	D3ZMA2_RAT	Mtmr14	Myotubularin related protein 14	1	FGMNVTSSEK	FGMNVTSSEK	2	FGMNVTSSEK2	8434	17659.4	13880
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	FGMTPSK	FGMTPSK	1	FGMTPSK1	71498.8	61535	55304
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	FGMTPSK	FGMTPSK	2	FGMTPSK2	1.5013e+06	1.50343e+06	1.68051e+06
Q8R3Z7	Q8R3Z7	Q8R3Z7_RAT	Ehd4	EH-domain containing 4	1	FGNAFLNR	FGNAFLNR	2	FGNAFLNR2	82401.4	59908.6	64082.3
D3ZFJ6	D3ZFJ6	D3ZFJ6_RAT	Lactb	Lactamase, beta	1	FGNAMLYGYQVGLFK	FGNAMLYGYQVGLFK	2	FGNAMLYGYQVGLFK2	6623.54	5837.93	
A0A8I5Y224	A0A8I5Y224	A0A8I5Y224_RAT	Adam9	ADAM metallopeptidase domain 9	1	FGNCGVSGSNYK	FGNC(UniMod:4)GVSGSNYK	2	FGNC(UniMod:4)GVSGSNYK2	10483.6		3999.33
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	FGNDLHVSNK	FGNDLHVSNK	2	FGNDLHVSNK2	3219.1		4323.49
P62994	P62994	GRB2_RAT	Grb2	Growth factor receptor-bound protein 2	1	FGNDVQHFK	FGNDVQHFK	2	FGNDVQHFK2	9656.28	4071.08	1604.29
A0A0G2K7Y9	A0A0G2K7Y9	A0A0G2K7Y9_RAT	Zg16b	Zymogen granule protein 16B	1	FGNDWSDVYGSR	FGNDWSDVYGSR	2	FGNDWSDVYGSR2	8660.37	5299.36	3507.14
Q9ES54	Q9ES54	NPL4_RAT	Nploc4	Nuclear protein localization protein 4 homolog	1	FGNEITQLAR	FGNEITQLAR	2	FGNEITQLAR2	8839.87	6269.93	4276.79
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	FGNELSADDFSHK	FGNELSADDFSHK	2	FGNELSADDFSHK2	3476.62	2127.39	
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	FGNELSADDFSHK	FGNELSADDFSHK	3	FGNELSADDFSHK3	7874.02	9291.37	17078.5
E9PT66	E9PT66	E9PT66_RAT	Sf3b3	Splicing factor 3b, subunit 3	1	FGNICVVR	FGNIC(UniMod:4)VVR	2	FGNIC(UniMod:4)VVR2	13700.4	15864.3	10563
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	FGNNPVSK	FGNNPVSK	1	FGNNPVSK1	24111	41665.2	41407.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	FGNNPVSK	FGNNPVSK	2	FGNNPVSK2	3.76611e+06	4.60151e+06	4.35422e+06
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	FGNPLLVQDVESYDPVLNPVLNR	FGNPLLVQDVESYDPVLNPVLNR	3	FGNPLLVQDVESYDPVLNPVLNR3	91972.4	110127	127018
Q6EV70	Q6EV70	OFUT1_RAT	Pofut1	GDP-fucose protein O-fucosyltransferase 1	1	FGNQADHFLGSLAFAK	FGNQADHFLGSLAFAK	3	FGNQADHFLGSLAFAK3	3139.78	9620.52	5431.13
A0A0G2K543	A0A0G2K543	A0A0G2K543_RAT	C2cd5	C2 calcium-dependent domain containing 5	1	FGNTTFK	FGNTTFK	2	FGNTTFK2	13885.9	12726	17143.4
Q9EPH8	B5DF80;Q9EPH8	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	0	FGPALSVK	FGPALSVK	2	FGPALSVK2		170363	156603
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	FGPCPTLWASLEPVSVDTAR	FGPC(UniMod:4)PTLWASLEPVSVDTAR	3	FGPC(UniMod:4)PTLWASLEPVSVDTAR3	205872	221818	206203
D3ZGA5	D3ZGA5	D3ZGA5_RAT	Rilp	Rab interacting lysosomal protein	1	FGPDAAAGLVPLVVR	FGPDAAAGLVPLVVR	2	FGPDAAAGLVPLVVR2	2973.07	4018.19	2799.11
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	FGPDSEK	FGPDSEK	1	FGPDSEK1	1141.85		
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	FGPDSEK	FGPDSEK	2	FGPDSEK2	222493	190761	229915
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	FGPDSEKK	FGPDSEKK	2	FGPDSEKK2	47992.5		39263.2
Q769K2	Q769K2	NAPEP_RAT	Napepld	N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D	1	FGPFDLAAIPIGAYEPR	FGPFDLAAIPIGAYEPR	2	FGPFDLAAIPIGAYEPR2	28469.6	29456.8	36200.8
Q769K2	Q769K2	NAPEP_RAT	Napepld	N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D	1	FGPFDLAAIPIGAYEPR	FGPFDLAAIPIGAYEPR	3	FGPFDLAAIPIGAYEPR3	6398.39	5223.07	1418.26
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	FGPGEGPVWMDDVGCGGGEEALRDCPR	FGPGEGPVWMDDVGC(UniMod:4)GGGEEALRDC(UniMod:4)PR	3	FGPGEGPVWMDDVGC(UniMod:4)GGGEEALRDC(UniMod:4)PR3	14951.6	17571.4	10721.1
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	FGPGGQLLK	FGPGGQLLK	2	FGPGGQLLK2	74448.9	83240.8	89216.8
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	FGPHLVPILVEK	FGPHLVPILVEK	2	FGPHLVPILVEK2	6029.77	5852.97	
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	FGPHLVPILVEK	FGPHLVPILVEK	3	FGPHLVPILVEK3	29684.7	29234.3	24810.7
A0A8I5ZXP5	A0A8I5ZXP5	A0A8I5ZXP5_RAT	U2surp	U2 snRNP-associated SURP domain containing	1	FGPLASVK	FGPLASVK	2	FGPLASVK2	247026		172668
A0A0G2K3Y6	A0A0G2K3Y6	A0A0G2K3Y6_RAT	Cpeb4	Cytoplasmic polyadenylation element binding protein 4	1	FGPLIVDWPHK	FGPLIVDWPHK	3	FGPLIVDWPHK3	3765.41	4061.79	3517.34
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	FGPTCADEK	FGPTC(UniMod:4)ADEK	2	FGPTC(UniMod:4)ADEK2	34816.9	29975	30831.2
A0A8I6ASC6	A0A8I6ASC6	A0A8I6ASC6_RAT	Igdcc4	Immunoglobulin superfamily, DCC subclass, member 4	1	FGPWGLR	FGPWGLR	2	FGPWGLR2	15833.7	18945.6	13952.3
P40112	P40112;D3Z8J0	PSB3_RAT	Psmb3	Proteasome subunit beta type-3	0	FGPYYTEPVIAGLDPK	FGPYYTEPVIAGLDPK	2	FGPYYTEPVIAGLDPK2	1.45785e+06	1.27966e+06	1.49443e+06
P40112	P40112;D3Z8J0	PSB3_RAT	Psmb3	Proteasome subunit beta type-3	0	FGPYYTEPVIAGLDPK	FGPYYTEPVIAGLDPK	3	FGPYYTEPVIAGLDPK3	524170	474844	538654
P55146	P55146	TYRO3_RAT	Tyro3	Tyrosine-protein kinase receptor TYRO3	1	FGQAFDSVMAR	FGQAFDSVMAR	2	FGQAFDSVMAR2	3670.54	9281.73	14361.2
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	FGQDCAETCDCAPGAR	FGQDC(UniMod:4)AETC(UniMod:4)DC(UniMod:4)APGAR	2	FGQDC(UniMod:4)AETC(UniMod:4)DC(UniMod:4)APGAR2	62386.9	57521.4	67686.1
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	FGQDCAETCDCAPGAR	FGQDC(UniMod:4)AETC(UniMod:4)DC(UniMod:4)APGAR	3	FGQDC(UniMod:4)AETC(UniMod:4)DC(UniMod:4)APGAR3	35272.1	35932	43930.1
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	FGQDFSTFLEAGVEMAGQAPSQEDR	FGQDFSTFLEAGVEMAGQAPSQEDR	3	FGQDFSTFLEAGVEMAGQAPSQEDR3	218716	228501	217407
Q62991	Q62991	SCFD1_RAT	Scfd1	Sec1 family domain-containing protein 1	1	FGQDIISPLLSVK	FGQDIISPLLSVK	2	FGQDIISPLLSVK2	16727.8	20596.7	17627.9
P20069	P20069	MPPA_RAT	Pmpca	Mitochondrial-processing peptidase subunit alpha	1	FGQFCTLGILINSGSR	FGQFC(UniMod:4)TLGILINSGSR	2	FGQFC(UniMod:4)TLGILINSGSR2			4334.12
F1MA10	F1MA10	F1MA10_RAT	Art4	NAD(P)(+)--arginine ADP-ribosyltransferase	1	FGQFLSASLLK	FGQFLSASLLK	2	FGQFLSASLLK2		5206.31	
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	FGQGAHHAFGQGGSEAEK	FGQGAHHAFGQGGSEAEK	2	FGQGAHHAFGQGGSEAEK2	4264.01	1002.75	
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	FGQGAHHAFGQGGSEAEK	FGQGAHHAFGQGGSEAEK	3	FGQGAHHAFGQGGSEAEK3	20983	28676.4	23571.9
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	FGQGAHHAFGQGGSEAEK	FGQGAHHAFGQGGSEAEK	4	FGQGAHHAFGQGGSEAEK4	23893.7	34366.4	23771.9
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	FGQGAHHAFGQGGSETEK	FGQGAHHAFGQGGSETEK	3	FGQGAHHAFGQGGSETEK3	9113.37	9969.47	11506.2
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	FGQGAHHAFGQGGSETEK	FGQGAHHAFGQGGSETEK	4	FGQGAHHAFGQGGSETEK4	7450.2	10771.8	11936.5
A0A8I6GFD8	A0A8I6GFD8	A0A8I6GFD8_RAT	Sfpq	Splicing factor proline and glutamine rich	1	FGQGGAGPVGGQGPR	FGQGGAGPVGGQGPR	2	FGQGGAGPVGGQGPR2	1997.65		
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	FGQGIHHAFGQGGR	FGQGIHHAFGQGGR	3	FGQGIHHAFGQGGR3	22379.8	16551	9926.9
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	FGQGVHHAFGQGGR	FGQGVHHAFGQGGR	2	FGQGVHHAFGQGGR2	4941.55	7532.53	7321.32
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	FGQGVHHAFGQGGR	FGQGVHHAFGQGGR	3	FGQGVHHAFGQGGR3	178169	185095	150118
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	FGQGVHHAFGQGGSEAEK	FGQGVHHAFGQGGSEAEK	2	FGQGVHHAFGQGGSEAEK2	1953.5	4330.15	4536.46
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	FGQGVHHAFGQGGSEAEK	FGQGVHHAFGQGGSEAEK	3	FGQGVHHAFGQGGSEAEK3	97998.3	81785.3	71565.2
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	FGQGVHHAFGQGGSEAEK	FGQGVHHAFGQGGSEAEK	4	FGQGVHHAFGQGGSEAEK4	110420	107242	142736
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	FGQGVHHALGQGGR	FGQGVHHALGQGGR	2	FGQGVHHALGQGGR2	1375.37	2492.27	2199.34
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	FGQGVHHALGQGGR	FGQGVHHALGQGGR	3	FGQGVHHALGQGGR3	32577.9	28935.3	43385.9
Q9JIX3	Q9JIX3	FHIT_RAT	Fhit	Bis(5'-adenosyl)-triphosphatase	1	FGQHLIKPSVVFLK	FGQHLIKPSVVFLK	4	FGQHLIKPSVVFLK4	5757.98	6560.79	2531.46
Q6P4Z6	Q6P4Z6	LCMT1_RAT	Lcmt1	Leucine carboxyl methyltransferase 1	1	FGQIMIENLR	FGQIMIENLR	2	FGQIMIENLR2		3506.19	4094.79
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	FGQLGLNDENDR	FGQLGLNDENDR	2	FGQLGLNDENDR2	6645.76	7838.65	8552.34
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	FGQLGLNDENDRYVPNLLK	FGQLGLNDENDRYVPNLLK	3	FGQLGLNDENDRYVPNLLK3	20038.4	18830.1	20188.4
Q07803	Q07803	EFGM_RAT	Gfm1	Elongation factor G, mitochondrial	1	FGQLTYVR	FGQLTYVR	2	FGQLTYVR2	6353.44	4109.11	7208.52
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	FGQMLGSNMTEFHSQISK	FGQMLGSNMTEFHSQISK	3	FGQMLGSNMTEFHSQISK3	188834	219011	225691
Q6U6G5	Q6U6G5;A0A8I6GKC7	ZC3HF_RAT	Zc3h15	Zinc finger CCCH domain-containing protein 15	0	FGQQNPR	FGQQNPR	2	FGQQNPR2	13148.9	12377.1	10650.9
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	FGQRPSNVIPMK	FGQRPSNVIPMK	3	FGQRPSNVIPMK3	83372.9	84292.6	91971
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	FGQRPSNVIPMKK	FGQRPSNVIPMKK	3	FGQRPSNVIPMKK3	14729.8	5149.32	5965.52
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	FGQTTPPLVDFLK	FGQTTPPLVDFLK	2	FGQTTPPLVDFLK2		3322.26	8693.56
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	FGQTVISPDLDK	FGQTVISPDLDK	2	FGQTVISPDLDK2	417822	375152	413242
Q9WTV0	Q9WTV0	PREB_RAT	Preb	Prolactin regulatory element-binding protein	1	FGQVPDQPGGLR	FGQVPDQPGGLR	2	FGQVPDQPGGLR2	78450.6	74929.6	84619.9
Q9Z2X5	Q9Z2X5;Q9Z214;O88801	HOME3_RAT	Homer3	Homer protein homolog 3	0	FGQWADSR	FGQWADSR	2	FGQWADSR2	21327.6	13842	10868.9
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	FGQYAGHVVPTILEK	FGQYAGHVVPTILEK	2	FGQYAGHVVPTILEK2	7664.28	3098.49	6374.82
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	FGQYAGHVVPTILEK	FGQYAGHVVPTILEK	3	FGQYAGHVVPTILEK3	148122	148789	154122
D3ZE26	D3ZE26	D3ZE26_RAT	Tmcc2	Transmembrane and coiled-coil domain family 2	1	FGSADNIAHLKDPMEDGPPEEAAR	FGSADNIAHLKDPMEDGPPEEAAR	4	FGSADNIAHLKDPMEDGPPEEAAR4	43845.2	46896.4	31529.9
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	FGSAIAPLGDLNR	FGSAIAPLGDLNR	2	FGSAIAPLGDLNR2	9.72956e+06	9.73092e+06	1.09352e+07
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	FGSAIAPLGDLNR	FGSAIAPLGDLNR	3	FGSAIAPLGDLNR3	17388.1	18591	18713.2
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	FGSAIPIPSLPDK	FGSAIPIPSLPDK	2	FGSAIPIPSLPDK2	188606	171392	172038
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	FGSALAVLDFNK	FGSALAVLDFNK	2	FGSALAVLDFNK2	49551.4	1.75098e+06	1.72401e+06
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	FGSALAVLDFNK	FGSALAVLDFNK	3	FGSALAVLDFNK3	12492.6	7325.4	8805.88
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	FGSCQQGVAATFTK	FGSC(UniMod:4)QQGVAATFTK	2	FGSC(UniMod:4)QQGVAATFTK2	323393	319695	379902
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	FGSCQQGVAATFTK	FGSC(UniMod:4)QQGVAATFTK	3	FGSC(UniMod:4)QQGVAATFTK3	2503.86		11054
A0A0G2K1N9	A0A0G2K1N9	A0A0G2K1N9_RAT	Selenoo	Selenoprotein O	1	FGSFEIFKPPDELTGR	FGSFEIFKPPDELTGR	3	FGSFEIFKPPDELTGR3	6349.86	6535.83	6145.11
D3ZUB7	D3ZUB7	D3ZUB7_RAT	Anapc4	Anaphase-promoting complex subunit 4	1	FGSFTYATTDK	FGSFTYATTDK	2	FGSFTYATTDK2	4773.97	10331.9	8531.4
Q4QQS7	Q4QQS7	Q4QQS7_RAT	Umps	Uridine 5'-monophosphate synthase	1	FGSFVLK	FGSFVLK	2	FGSFVLK2	5704.61		7344.45
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	FGSGYVSGWGK	FGSGYVSGWGK	2	FGSGYVSGWGK2	163272	185644	125994
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	FGSGYVSGWGKVFNK	FGSGYVSGWGKVFNK	3	FGSGYVSGWGKVFNK3	5854.37	7065.91	5882.15
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	FGSLCEVETGR	FGSLC(UniMod:4)EVETGR	2	FGSLC(UniMod:4)EVETGR2	18035.5	11691	13838.8
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	FGSLDTYLK	FGSLDTYLK	2	FGSLDTYLK2	51037.4	52926.9	58518.2
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	FGSLDTYLKK	FGSLDTYLKK	3	FGSLDTYLKK3	11207.3	9982.06	13780
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	FGSLQALPTR	FGSLQALPTR	2	FGSLQALPTR2	35658.6	35608.4	38665
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	FGSLTSNFK	FGSLTSNFK	2	FGSLTSNFK2	152255	145257	145381
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	FGSLTSNFKEFGSK	FGSLTSNFKEFGSK	2	FGSLTSNFKEFGSK2	1332.05	4872.56	8250.3
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	FGSLTSNFKEFGSK	FGSLTSNFKEFGSK	3	FGSLTSNFKEFGSK3	11208.7	60210.4	25336
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	FGSNFLSR	FGSNFLSR	2	FGSNFLSR2	58614.1	44296.9	31956.1
Q0Z843	Q0Z843	Q0Z843_RAT	Fig4	FIG4 phosphoinositide 5-phosphatase	1	FGSPIIILNLVK	FGSPIIILNLVK	2	FGSPIIILNLVK2		4764.49	2260.79
Q62848	Q62848	ARFG1_RAT	Arfgap1	ADP-ribosylation factor GTPase-activating protein 1	1	FGSQASQK	FGSQASQK	2	FGSQASQK2			40352.6
A0A8I5ZYB9	A0A8I5ZYB9	A0A8I5ZYB9_RAT	Lrrc32	Leucine rich repeat containing 32	1	FGSQEEVSLSLVRPEDCEK	FGSQEEVSLSLVRPEDC(UniMod:4)EK	3	FGSQEEVSLSLVRPEDC(UniMod:4)EK3	73509	61843.5	57244.4
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	FGSSITYTCNEGYR	FGSSITYTC(UniMod:4)NEGYR	2	FGSSITYTC(UniMod:4)NEGYR2	101777	114062	126347
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	FGSSLVSVR	FGSSLVSVR	2	FGSSLVSVR2	34568.1	26909.7	37738
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	FGSTADALVSDDEATR	FGSTADALVSDDEATR	2	FGSTADALVSDDEATR2	40538.4	45403.3	37659.1
Q4KLZ0	Q4KLZ0	Q4KLZ0_RAT	Vnn1	Vanin 1	1	FGSTPVQER	FGSTPVQER	2	FGSTPVQER2	9271.97	9497.52	5911.99
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	FGSVLHLTDLDDDGLDEIIMAAPLR	FGSVLHLTDLDDDGLDEIIMAAPLR	3	FGSVLHLTDLDDDGLDEIIMAAPLR3	319193	294098	261331
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	FGSVLHLTDLDDDGLDEIIMAAPLR	FGSVLHLTDLDDDGLDEIIMAAPLR	4	FGSVLHLTDLDDDGLDEIIMAAPLR4	29220.8	20134.3	35074.2
D3ZMQ3	D3ZMQ3	D3ZMQ3_RAT	Itga4	Integrin subunit alpha 4	1	FGSYLGYSVGAGHFR	FGSYLGYSVGAGHFR	3	FGSYLGYSVGAGHFR3	3144.71	4214.18	3484.96
P18614	P18614	ITA1_RAT	Itga1	Integrin alpha-1	1	FGTAIAAVK	FGTAIAAVK	2	FGTAIAAVK2	13518.3	14763.2	9051.56
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	FGTCYVLTK	FGTC(UniMod:4)YVLTK	2	FGTC(UniMod:4)YVLTK2		3079.18	
F1M6V8	F1M6V8	F1M6V8_RAT	Strn4	Striatin 4	1	FGTDLNQGEK	FGTDLNQGEK	2	FGTDLNQGEK2	8762.46	3853.06	8067.4
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	FGTLLSAVITK	FGTLLSAVITK	2	FGTLLSAVITK2	15106	8193.12	10011.7
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	FGTLNGFQILHDR	FGTLNGFQILHDR	2	FGTLNGFQILHDR2	2619.76	1370.69	966.219
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	FGTLNGFQILHDR	FGTLNGFQILHDR	3	FGTLNGFQILHDR3	15405.9	26619.5	17070.2
Q8K581	Q8K581	TXND9_RAT	Txndc9	Thioredoxin domain-containing protein 9	1	FGTNFTK	FGTNFTK	2	FGTNFTK2	39827.1	41613.6	38943.9
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	FGTQPNSVSR	FGTQPNSVSR	2	FGTQPNSVSR2	1.69362e+06	1.77807e+06	1.79606e+06
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	FGTQPNSVSRDPEVK	FGTQPNSVSRDPEVK	2	FGTQPNSVSRDPEVK2	41238.3	52627.7	49425
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	FGTQPNSVSRDPEVK	FGTQPNSVSRDPEVK	3	FGTQPNSVSRDPEVK3	497865	708632	794670
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	FGTTKPPLAAK	FGTTKPPLAAK	2	FGTTKPPLAAK2	21677	14165.2	15745.5
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	FGTTKPPLAAKPTYEEK	FGTTKPPLAAKPTYEEK	2	FGTTKPPLAAKPTYEEK2	51518.1	37344.4	43477.1
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	FGTTKPPLAAKPTYEEK	FGTTKPPLAAKPTYEEK	3	FGTTKPPLAAKPTYEEK3	470129	434310	436339
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	FGTTKPPLAAKPTYEEK	FGTTKPPLAAKPTYEEK	4	FGTTKPPLAAKPTYEEK4	876154	975233	1.07305e+06
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	FGTVLEALEK	FGTVLEALEK	2	FGTVLEALEK2	37252.4	34710.1	36616.8
P58200	P58200	VTI1B_RAT	Vti1b	Vesicle transport through interaction with t-SNAREs homolog 1B	1	FGTYTLENEHLNR	FGTYTLENEHLNR	2	FGTYTLENEHLNR2	4211.04		4978.87
P58200	P58200	VTI1B_RAT	Vti1b	Vesicle transport through interaction with t-SNAREs homolog 1B	1	FGTYTLENEHLNR	FGTYTLENEHLNR	3	FGTYTLENEHLNR3	30602.3	33334.1	28415.9
P11951	P11951;A0A8I6GIF3;A0A8I5ZK84	CX6C2_RAT	Cox6c2	Cytochrome c oxidase subunit 6C-2	0	FGVAEPR	FGVAEPR	2	FGVAEPR2	435180	347999	382898
P56522	P56522	ADRO_RAT	Fdxr	NADPH:adrenodoxin oxidoreductase, mitochondrial	1	FGVAPDHPEVK	FGVAPDHPEVK	3	FGVAPDHPEVK3	22130.1	22724.2	22441.5
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	FGVDSWSDFR	FGVDSWSDFR	2	FGVDSWSDFR2	10306	3879.51	8664.1
P29147	P29147	BDH_RAT	Bdh1	D-beta-hydroxybutyrate dehydrogenase, mitochondrial	1	FGVEAFSDCLR	FGVEAFSDC(UniMod:4)LR	2	FGVEAFSDC(UniMod:4)LR2	39332.8	30049.2	31982.4
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	FGVEQDR	FGVEQDR	2	FGVEQDR2	695930	682417	616519
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	FGVEQDRMDK	FGVEQDRMDK	2	FGVEQDRMDK2			3339.6
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	FGVEQDRMDK	FGVEQDRMDK	3	FGVEQDRMDK3	52317.4	101865	140949
P11980	P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	1	FGVEQDVDMVFASFIR	FGVEQDVDMVFASFIR	2	FGVEQDVDMVFASFIR2		27939.5	36225.2
P11980	P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	1	FGVEQDVDMVFASFIR	FGVEQDVDMVFASFIR	3	FGVEQDVDMVFASFIR3	7492.41		
Q76HM9	Q76HM9	HYAL3_RAT	Hyal3	Hyaluronidase-3	1	FGVHLPLDALGIIANHGQR	FGVHLPLDALGIIANHGQR	4	FGVHLPLDALGIIANHGQR4	2154.01	6771.62	1404.09
A0A0G2K931	A0A8I5Y182;A0A0G2K931	A0A0G2K931_RAT	Psat1	Phosphoserine aminotransferase	0	FGVIFAGAQK	FGVIFAGAQK	2	FGVIFAGAQK2	7100.62	13245.4	12367.3
B2RYB1	B2RYB1	B2RYB1_RAT	Txndc11	Thioredoxin domain containing 11	1	FGVITNK	FGVITNK	2	FGVITNK2	10707.2	8046.37	11171.9
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	FGVLELQEHLDTYTTK	FGVLELQEHLDTYTTK	3	FGVLELQEHLDTYTTK3	28926.6	31400.8	34912
D3ZSL2	D3ZSL2	D3ZSL2_RAT	Abracl	Costars family protein ABRACL	1	FGVLFQDDR	FGVLFQDDR	2	FGVLFQDDR2	244972	215219	198044
P35433	P35433	PUR1_RAT	Ppat	Amidophosphoribosyltransferase	1	FGVLSDNFK	FGVLSDNFK	2	FGVLSDNFK2	19905.7	7723.25	6920.48
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	FGVPLPSTLEPHPR	FGVPLPSTLEPHPR	2	FGVPLPSTLEPHPR2	112332	88797.5	93499.4
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	FGVPLPSTLEPHPR	FGVPLPSTLEPHPR	3	FGVPLPSTLEPHPR3	400577	584805	478991
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	FGVPLPSTLEPHPRPLLQR	FGVPLPSTLEPHPRPLLQR	3	FGVPLPSTLEPHPRPLLQR3	13809.4	13905.9	19986.1
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	FGVPLPSTLEPHPRPLLQR	FGVPLPSTLEPHPRPLLQR	4	FGVPLPSTLEPHPRPLLQR4	87288.3	145726	159006
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	FGVPVIADGGIQNVGHIAK	FGVPVIADGGIQNVGHIAK	3	FGVPVIADGGIQNVGHIAK3	58265.1	54689.4	72460.5
D3ZLZ7	D3ZLZ7	IMDH1_RAT	Impdh1	Inosine-5'-monophosphate dehydrogenase 1	1	FGVPVIADGGIQTVGHVVK	FGVPVIADGGIQTVGHVVK	3	FGVPVIADGGIQTVGHVVK3	10635.4		6844.85
P12928	P12928	KPYR_RAT	Pklr	Pyruvate kinase PKLR	1	FGVQHNVDIIFASFVR	FGVQHNVDIIFASFVR	3	FGVQHNVDIIFASFVR3	2448.97	6389.65	
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	FGVQMDR	FGVQMDR	2	FGVQMDR2	790699	936779	925216
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	FGVQTDR	FGVQTDR	2	FGVQTDR2	1.11359e+06	1.14408e+06	1.21297e+06
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	FGVQTDRQDK	FGVQTDRQDK	3	FGVQTDRQDK3	67445	116124	124324
P46844	P46844	BIEA_RAT	Blvra	Biliverdin reductase A	1	FGVVVVGVGR	FGVVVVGVGR	2	FGVVVVGVGR2	12439.2	8542.91	8992.66
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	FGWDCHGLPVEYEIDK	FGWDC(UniMod:4)HGLPVEYEIDK	3	FGWDC(UniMod:4)HGLPVEYEIDK3	34619.6	31570.8	38010.5
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	FGWFPCNYVEK	FGWFPC(UniMod:4)NYVEK	2	FGWFPC(UniMod:4)NYVEK2	11068	18017.6	16817.7
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	FGYDTNLFTVVR	FGYDTNLFTVVR	2	FGYDTNLFTVVR2	21136.9	15700.9	17386
M0RCP9	M0RCP9	M0RCP9_RAT	Pin4	Peptidyl-prolyl cis-trans isomerase	1	FGYHIIMVEGR	FGYHIIMVEGR	3	FGYHIIMVEGR3			1161.84
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	FGYILHTDNR	FGYILHTDNR	2	FGYILHTDNR2	20394.9	19747	13964.4
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	FGYILHTDNR	FGYILHTDNR	3	FGYILHTDNR3	122770	158669	144153
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	FGYLEGQEYR	FGYLEGQEYR	2	FGYLEGQEYR2	49507.3	36528.6	44184.1
P13383	P13383	NUCL_RAT	Ncl	Nucleolin	1	FGYVDFESAEDLEK	FGYVDFESAEDLEK	2	FGYVDFESAEDLEK2	5069.66		2641
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	FHAFLLYLGYTAQAAR	FHAFLLYLGYTAQAAR	3	FHAFLLYLGYTAQAAR3	7762.8	8482.54	9959.96
Q6AXT5	Q6AXT5	RAB21_RAT	Rab21	Ras-related protein Rab-21	1	FHALGPIYYR	FHALGPIYYR	2	FHALGPIYYR2	93959.7	80870.6	78521.5
Q6AXT5	Q6AXT5	RAB21_RAT	Rab21	Ras-related protein Rab-21	1	FHALGPIYYR	FHALGPIYYR	3	FHALGPIYYR3	479204	477712	497481
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	FHAPSFHVDVPVQFDVYLK	FHAPSFHVDVPVQFDVYLK	3	FHAPSFHVDVPVQFDVYLK3	6025.09	5371.08	6034.75
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	FHAPSFHVDVPVQFDVYLK	FHAPSFHVDVPVQFDVYLK	4	FHAPSFHVDVPVQFDVYLK4	11509.9	17790.1	13802.2
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	FHATVSFDTDTGLK	FHATVSFDTDTGLK	3	FHATVSFDTDTGLK3	7026.31	6109.66	1941.15
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	FHAVNGYVADALLGLVMAEGR	FHAVNGYVADALLGLVMAEGR	3	FHAVNGYVADALLGLVMAEGR3	76486.5	89762.8	78684.4
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	FHAVNGYVADALLGLVMAEGR	FHAVNGYVADALLGLVMAEGR	4	FHAVNGYVADALLGLVMAEGR4	3242.9	1945.34	4545.98
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	FHAVNGYVADALLGLVMAEGRR	FHAVNGYVADALLGLVMAEGRR	4	FHAVNGYVADALLGLVMAEGRR4		24053.6	
Q56AP7	Q56AP7	CRBN_RAT	Crbn	Protein cereblon	1	FHCANLTSWPR	FHC(UniMod:4)ANLTSWPR	3	FHC(UniMod:4)ANLTSWPR3	13434	16708.7	19649.8
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	FHCATGYQLK	FHC(UniMod:4)ATGYQLK	2	FHC(UniMod:4)ATGYQLK2	16482.8	17616.4	10899.3
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	FHCATGYQLK	FHC(UniMod:4)ATGYQLK	3	FHC(UniMod:4)ATGYQLK3	73246.5	73075.1	62001.4
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	FHCDQQAEQK	FHC(UniMod:4)DQQAEQK	2	FHC(UniMod:4)DQQAEQK2			5372.08
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	FHCDQQAEQK	FHC(UniMod:4)DQQAEQK	3	FHC(UniMod:4)DQQAEQK3			4322.91
Q9R1D1	Q9R1D1	CTCF_RAT	Ctcf	Transcriptional repressor CTCF	1	FHCPHCDTVIAR	FHC(UniMod:4)PHC(UniMod:4)DTVIAR	3	FHC(UniMod:4)PHC(UniMod:4)DTVIAR3	9960.88	2311.42	
O88453	O88453;A0A8I6AJV7	SAFB1_RAT	Safb	Scaffold attachment factor B1	0	FHDFDHR	FHDFDHR	2	FHDFDHR2	17007.1	7239.34	932.83
O35244	O35244	PRDX6_RAT	Prdx6	Peroxiredoxin-6	1	FHDFLGDSWGILFSHPR	FHDFLGDSWGILFSHPR	3	FHDFLGDSWGILFSHPR3	18090.1	12233.2	13337
O35244	O35244	PRDX6_RAT	Prdx6	Peroxiredoxin-6	1	FHDFLGDSWGILFSHPR	FHDFLGDSWGILFSHPR	4	FHDFLGDSWGILFSHPR4	14264	20815.4	12796.4
D4A830	D4A830	D4A830_RAT	Ppa2	inorganic diphosphatase	1	FHDIDDVK	FHDIDDVK	2	FHDIDDVK2	1921.71	3531.36	3677.69
P54001	P54001	P4HA1_RAT	P4ha1	Prolyl 4-hydroxylase subunit alpha-1	1	FHDIISDAEIEIVK	FHDIISDAEIEIVK	2	FHDIISDAEIEIVK2	7444.21	5841.54	4570.77
P54001	P54001	P4HA1_RAT	P4ha1	Prolyl 4-hydroxylase subunit alpha-1	1	FHDIISDAEIEIVK	FHDIISDAEIEIVK	3	FHDIISDAEIEIVK3	20137.7	18566.6	23190
F1M9D6	F1M9D6	F1M9D6_RAT	Stat1	Signal transducer and activator of transcription	1	FHDLLSQLDDQYSR	FHDLLSQLDDQYSR	3	FHDLLSQLDDQYSR3	7873.87	3546.91	
A0A0G2QC38	A0A0G2QC38	A0A0G2QC38_RAT	Srsf11	Serine and arginine rich splicing factor 11	1	FHDPDSAVVAQHLTNTVFVDR	FHDPDSAVVAQHLTNTVFVDR	3	FHDPDSAVVAQHLTNTVFVDR3	7196.65	4780.91	
A0A0G2QC38	A0A0G2QC38	A0A0G2QC38_RAT	Srsf11	Serine and arginine rich splicing factor 11	1	FHDPDSAVVAQHLTNTVFVDR	FHDPDSAVVAQHLTNTVFVDR	4	FHDPDSAVVAQHLTNTVFVDR4	19908.4		
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	FHDSSSPLLTSGTSVAELPWAVK	FHDSSSPLLTSGTSVAELPWAVK	3	FHDSSSPLLTSGTSVAELPWAVK3	26946.1	29243.9	36173.3
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	FHEAFIPSPDGDRDIFIDGVVAR	FHEAFIPSPDGDRDIFIDGVVAR	3	FHEAFIPSPDGDRDIFIDGVVAR3	8268.88	11583.8	9529.35
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	FHEAFIPSPDGDRDIFIDGVVAR	FHEAFIPSPDGDRDIFIDGVVAR	4	FHEAFIPSPDGDRDIFIDGVVAR4	32309.5	54910.7	42571
Q5U2N0	Q5U2N0	PYRG2_RAT	Ctps2	CTP synthase 2	1	FHEAWQK	FHEAWQK	2	FHEAWQK2	6359.21	3610.27	4164.45
Q8R491	Q8R491;Q641Z6	EHD3_RAT	Ehd3	EH domain-containing protein 3	0	FHEFHSPALEDADFDNKPMVLLVGQYSTGK	FHEFHSPALEDADFDNKPMVLLVGQYSTGK	4	FHEFHSPALEDADFDNKPMVLLVGQYSTGK4	99414.8	81209.6	78788.2
Q8R3Z7	Q8R3Z7	Q8R3Z7_RAT	Ehd4	EH-domain containing 4	1	FHEFHSPALEDADFENKPMILLVGQYSTGK	FHEFHSPALEDADFENKPMILLVGQYSTGK	4	FHEFHSPALEDADFENKPMILLVGQYSTGK4	2160.91	5378.2	
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	FHEGQETPLLLGR	FHEGQETPLLLGR	2	FHEGQETPLLLGR2	3631.71	3600.63	3827.26
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	FHEGQETPLLLGR	FHEGQETPLLLGR	3	FHEGQETPLLLGR3	41494.9	37793.7	44263.9
Q7TMZ5	Q7TMZ5	Q7TMZ5_RAT	Arl6ip1	ADP-ribosylation factor like GTPase 6 interacting protein 1	1	FHEICSNLVK	FHEIC(UniMod:4)SNLVK	2	FHEIC(UniMod:4)SNLVK2	15086.2	5738.67	3947.19
Q7TMZ5	Q7TMZ5	Q7TMZ5_RAT	Arl6ip1	ADP-ribosylation factor like GTPase 6 interacting protein 1	1	FHEICSNLVK	FHEIC(UniMod:4)SNLVK	3	FHEIC(UniMod:4)SNLVK3	14898.2	22939.5	8978.6
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	FHFASALK	FHFASALK	2	FHFASALK2	4505.08	6060.84	2035.74
Q03346	Q03346	MPPB_RAT	Pmpcb	Mitochondrial-processing peptidase subunit beta	1	FHFGDSLCAHK	FHFGDSLC(UniMod:4)AHK	3	FHFGDSLC(UniMod:4)AHK3	6808.72	6839.39	7234.74
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	FHFPSLTEL	FHFPSLTEL	2	FHFPSLTEL2	13512	17395.3	14407.9
D3ZCG2	D3ZCG2;Q7M6Z5;F1M5N7;D4A9P0	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	0	FHFVDLAGSER	FHFVDLAGSER	2	FHFVDLAGSER2	9372.81	5799.2	6711.71
D3ZCG2	D3ZCG2;Q7M6Z5;F1M5N7;D4A9P0	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	0	FHFVDLAGSER	FHFVDLAGSER	3	FHFVDLAGSER3	25388.5	28710.7	34090.6
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	FHGCVDEDVFNSSR	FHGC(UniMod:4)VDEDVFNSSR	2	FHGC(UniMod:4)VDEDVFNSSR2	5648.56	6453.35	5763.66
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	FHGCVDEDVFNSSR	FHGC(UniMod:4)VDEDVFNSSR	3	FHGC(UniMod:4)VDEDVFNSSR3	13666.6	14430.2	15538.8
Q9WU61	Q9WU61	CLCC1_RAT	Clcc1	Chloride channel CLIC-like protein 1	1	FHGGAGDADFSYR	FHGGAGDADFSYR	3	FHGGAGDADFSYR3	9455.09	7649.17	6459.6
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	FHGGWALIDCDPSLTDAAHR	FHGGWALIDC(UniMod:4)DPSLTDAAHR	3	FHGGWALIDC(UniMod:4)DPSLTDAAHR3	5189.53	11486.3	8138.68
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	FHGGWALIDCDPSLTDAAHR	FHGGWALIDC(UniMod:4)DPSLTDAAHR	4	FHGGWALIDC(UniMod:4)DPSLTDAAHR4	19760.2	38074.6	21041.2
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	FHGILDQGEGVLIIFDEPPVDK	FHGILDQGEGVLIIFDEPPVDK	3	FHGILDQGEGVLIIFDEPPVDK3	61187.9	62161.3	72629.7
A0A8I6AL39	A0A8I6AL39	A0A8I6AL39_RAT	Fgd3	FYVE, RhoGEF and PH domain containing 3	1	FHGQFLLPGLK	FHGQFLLPGLK	3	FHGQFLLPGLK3	6546.42	6017.61	4622.36
Q63493	Q63493	CD1D_RAT	Cd1d	Antigen-presenting glycoprotein CD1d	1	FHGTSWQK	FHGTSWQK	2	FHGTSWQK2	14513.1	17541.9	21560.3
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	FHHTFSTEIAK	FHHTFSTEIAK	2	FHHTFSTEIAK2	91845.6	75882.9	86749.7
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	FHHTFSTEIAK	FHHTFSTEIAK	3	FHHTFSTEIAK3	863073	927244	917040
P61314	P61314;A0A8I5ZY58;A0A8I6A471	RL15_RAT	Rpl15	Large ribosomal subunit protein eL15	0	FHHTIGGSR	FHHTIGGSR	2	FHHTIGGSR2			28042.2
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	FHIDPLR	FHIDPLR	2	FHIDPLR2	4906.28	10468.2	3071.67
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	FHIGCEK	FHIGC(UniMod:4)EK	2	FHIGC(UniMod:4)EK2	82394.4	69409.3	84144.3
B1WBN7	B1WBN7	B1WBN7_RAT	Fam20c	FAM20C	1	FHIGINR	FHIGINR	2	FHIGINR2	109312	100659	65896.7
Q505J9	Q505J9	ATAD1_RAT	Atad1	Outer mitochondrial transmembrane helix translocase	1	FHINQPALK	FHINQPALK	2	FHINQPALK2	7349.68	4660.48	11119.8
Q5I0H9	Q5I0H9	PDIA5_RAT	Pdia5	Protein disulfide-isomerase A5	1	FHISAFPTLK	FHISAFPTLK	2	FHISAFPTLK2	8418.77	11348.4	7194.41
Q5I0H9	Q5I0H9	PDIA5_RAT	Pdia5	Protein disulfide-isomerase A5	1	FHISAFPTLK	FHISAFPTLK	3	FHISAFPTLK3	33741	33326.5	35904.8
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	FHISPEGFLTINDVGTADAGR	FHISPEGFLTINDVGTADAGR	3	FHISPEGFLTINDVGTADAGR3	44083.4	47192.7	40273
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	FHIYNGTRPCESVSSSVQLPEDELFAR	FHIYNGTRPC(UniMod:4)ESVSSSVQLPEDELFAR	4	FHIYNGTRPC(UniMod:4)ESVSSSVQLPEDELFAR4	66957.2	86778.3	69771
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	FHKPGENYK	FHKPGENYK	2	FHKPGENYK2			3230.46
A0A8I6GEF9	A0A8I6GEF9	A0A8I6GEF9_RAT	Mrpl58	Mitochondrial ribosomal protein L58	1	FHLASADWIAEPVR	FHLASADWIAEPVR	3	FHLASADWIAEPVR3	6976.07		6228.68
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	FHLCSVATR	FHLC(UniMod:4)SVATR	2	FHLC(UniMod:4)SVATR2	96768.3	142380	90752.9
P35000	P35000	VIPR2_RAT	Vipr2	Vasoactive intestinal polypeptide receptor 2	1	FHLEIQEEETK	FHLEIQEEETK	3	FHLEIQEEETK3	25363	32873.1	30199.7
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	FHLGSYTIQSIVAGSTHLFSTK	FHLGSYTIQSIVAGSTHLFSTK	4	FHLGSYTIQSIVAGSTHLFSTK4	8248.23	3931.58	3305.73
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	FHLISPLIQK	FHLISPLIQK	2	FHLISPLIQK2	10203.2	10827.9	13413.2
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	FHLISPLIQK	FHLISPLIQK	3	FHLISPLIQK3	45088.8	32396	47553.6
A0A8I5ZP70	A0A8I5ZP70	A0A8I5ZP70_RAT	Tom1l2	Target of myb1 like 2 membrane trafficking protein	1	FHLLVANR	FHLLVANR	2	FHLLVANR2	14647.4	13927.9	16364.3
D4ABP9	D4ABP9	FBX3_RAT	Fbxo3	F-box only protein 3	1	FHMACPTFR	FHMAC(UniMod:4)PTFR	3	FHMAC(UniMod:4)PTFR3	26770.6	24296.7	16004.8
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	FHMDGAEFGHSVVQYGGSWVVVGAPK	FHMDGAEFGHSVVQYGGSWVVVGAPK	3	FHMDGAEFGHSVVQYGGSWVVVGAPK3	9042.19	4255.17	3083.55
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	FHMDGAEFGHSVVQYGGSWVVVGAPK	FHMDGAEFGHSVVQYGGSWVVVGAPK	4	FHMDGAEFGHSVVQYGGSWVVVGAPK4	40772.5	52660.7	47675.8
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	FHMFDEDEK	FHMFDEDEK	2	FHMFDEDEK2	37854.9	29621.8	30829.3
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	FHMFDEDEK	FHMFDEDEK	3	FHMFDEDEK3	44300.7	33497.3	41223.3
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	FHMFDEDEKGFITIVDVQR	FHMFDEDEKGFITIVDVQR	4	FHMFDEDEKGFITIVDVQR4	15749.8	31374.8	
B0BN63	B0BN63	B0BN63_RAT	Ahsa1	Activator of Hsp90 ATPase activity 1	1	FHMVDGNVTGEFTDLVPEK	FHMVDGNVTGEFTDLVPEK	3	FHMVDGNVTGEFTDLVPEK3	35621.2	44165.1	38729
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	FHMYEGYSLSK	FHMYEGYSLSK	2	FHMYEGYSLSK2	12334	12975	
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	FHMYEGYSLSK	FHMYEGYSLSK	3	FHMYEGYSLSK3	56255.6	39774.2	49575.3
D3ZEE4	D3ZEE4	D3ZEE4_RAT	Plxdc1	Plexin domain containing 1	1	FHNHPNHSTYTEVEPSGHEK	FHNHPNHSTYTEVEPSGHEK	3	FHNHPNHSTYTEVEPSGHEK3	3980.26	1304.8	1833.45
D3ZEE4	D3ZEE4	D3ZEE4_RAT	Plxdc1	Plexin domain containing 1	1	FHNHPNHSTYTEVEPSGHEK	FHNHPNHSTYTEVEPSGHEK	4	FHNHPNHSTYTEVEPSGHEK4	9611.46	15610.6	10875.5
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	FHNIMSNETIGTLSFLTSEIK	FHNIMSNETIGTLSFLTSEIK	3	FHNIMSNETIGTLSFLTSEIK3	4028.77	2453.99	4241.75
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	FHNPLWNVLTGR	FHNPLWNVLTGR	2	FHNPLWNVLTGR2	24403.7	18287.1	9864.13
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	FHNPLWNVLTGR	FHNPLWNVLTGR	3	FHNPLWNVLTGR3	46708.1	55844.6	37700.1
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	FHPDHFTCTFCLR	FHPDHFTC(UniMod:4)TFC(UniMod:4)LR	3	FHPDHFTC(UniMod:4)TFC(UniMod:4)LR3	13481.4	10928.8	10462.2
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	FHPDHFTCTFCLR	FHPDHFTC(UniMod:4)TFC(UniMod:4)LR	4	FHPDHFTC(UniMod:4)TFC(UniMod:4)LR4	11865.8	11298.8	11002.4
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	FHPDHFTCTFCLRPLTK	FHPDHFTC(UniMod:4)TFC(UniMod:4)LRPLTK	3	FHPDHFTC(UniMod:4)TFC(UniMod:4)LRPLTK3	57576.9	61410.7	53332.9
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	FHPDHFTCTFCLRPLTK	FHPDHFTC(UniMod:4)TFC(UniMod:4)LRPLTK	4	FHPDHFTC(UniMod:4)TFC(UniMod:4)LRPLTK4	69155.5	81876.6	77195.7
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	FHPDINVYIIEVR	FHPDINVYIIEVR	3	FHPDINVYIIEVR3	5681.36		4310.6
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	FHPEPYGLEDDQR	FHPEPYGLEDDQR	2	FHPEPYGLEDDQR2	11596.6	8268.55	5512.62
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	FHPEPYGLEDDQR	FHPEPYGLEDDQR	3	FHPEPYGLEDDQR3	43802.6	48353.4	36037.3
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	FHPGPGYEQR	FHPGPGYEQR	3	FHPGPGYEQR3	11200.6	24417.4	17479.1
F1M3H8	F1M3H8	F1M3H8_RAT	Hnrnpa0	Heterogeneous nuclear ribonucleoprotein A0	1	FHPIQGHR	FHPIQGHR	2	FHPIQGHR2	101508		9604.01
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	FHPLAADVLASSSYDLTIR	FHPLAADVLASSSYDLTIR	3	FHPLAADVLASSSYDLTIR3	24306.3	35431.9	20247.4
A0A0G2K0J0	A0A0G2K0J0	A0A0G2K0J0_RAT	Supt6h	Transcription elongation factor spt6	1	FHPLQEHVVK	FHPLQEHVVK	3	FHPLQEHVVK3	1300.1		
Q62871	Q62871;Q63100	DC1I2_RAT	Dync1i2	Cytoplasmic dynein 1 intermediate chain 2	0	FHPNLVVGGTYSGQIVLWDNR	FHPNLVVGGTYSGQIVLWDNR	3	FHPNLVVGGTYSGQIVLWDNR3	13161.9	6126.79	3519.2
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	FHPQYQEVNGTLPLIK	FHPQYQEVNGTLPLIK	3	FHPQYQEVNGTLPLIK3	1937.92	4089.13	2237.1
A0A8I6AE33	A0A8I6AE33	A0A8I6AE33_RAT	Wdr37	WD repeat domain 37	1	FHPSEQLALTASGDQTAHIWR	FHPSEQLALTASGDQTAHIWR	3	FHPSEQLALTASGDQTAHIWR3	6753.47	11235.1	
A0A8I6AE33	A0A8I6AE33	A0A8I6AE33_RAT	Wdr37	WD repeat domain 37	1	FHPSEQLALTASGDQTAHIWR	FHPSEQLALTASGDQTAHIWR	4	FHPSEQLALTASGDQTAHIWR4	9178.3	10744.3	14337.1
Q63054	Q63054	ICA69_RAT	Ica1	Islet cell autoantigen 1	1	FHQEVETFR	FHQEVETFR	3	FHQEVETFR3	6150.03	10707.7	9341.56
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	FHQGQNLDAFR	FHQGQNLDAFR	3	FHQGQNLDAFR3	16358.2	9805.36	8407.42
P47727	B2GV72;P47727	CBR1_RAT	Cbr1	Carbonyl reductase [NADPH] 1	0	FHQLDIDNPQSIR	FHQLDIDNPQSIR	2	FHQLDIDNPQSIR2	2025.88	1998.48	
P47727	B2GV72;P47727	CBR1_RAT	Cbr1	Carbonyl reductase [NADPH] 1	0	FHQLDIDNPQSIR	FHQLDIDNPQSIR	3	FHQLDIDNPQSIR3	18291.2	15101.7	10945.6
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	FHSDDTISK	FHSDDTISK	2	FHSDDTISK2	17036.8		13642.9
Q6GQP4	Q6GQP4	RAB31_RAT	Rab31	Ras-related protein Rab-31	1	FHSLAPMYYR	FHSLAPMYYR	2	FHSLAPMYYR2	23726.2	10936.4	15667.1
Q6GQP4	Q6GQP4	RAB31_RAT	Rab31	Ras-related protein Rab-31	1	FHSLAPMYYR	FHSLAPMYYR	3	FHSLAPMYYR3	118404	127370	107301
Q4V8H8	Q8R3Z7;Q4V8H8	EHD2_RAT	Ehd2	EH domain-containing protein 2	0	FHSLKPK	FHSLKPK	2	FHSLKPK2			5880.98
Q66H62	A0A8I6A0L1;Q66H62	CYLD_RAT	Cyld	Ubiquitin carboxyl-terminal hydrolase CYLD	0	FHSLPFSLTK	FHSLPFSLTK	3	FHSLPFSLTK3	6170.69	3758.83	2506.68
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	FHSMDELVEHYK	FHSMDELVEHYK	3	FHSMDELVEHYK3	30798.7	33706.2	24115.9
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	FHSMDELVEHYK	FHSMDELVEHYK	4	FHSMDELVEHYK4	17054.4	19435.9	20261.5
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	FHSTYEELTGWLR	FHSTYEELTGWLR	3	FHSTYEELTGWLR3	36900.3	49576.6	48797.7
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	FHTEALTALLSDDSK	FHTEALTALLSDDSK	2	FHTEALTALLSDDSK2	15766.2	18073.1	20615.6
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	FHTEALTALLSDDSK	FHTEALTALLSDDSK	3	FHTEALTALLSDDSK3	214967	248876	220088
P35281	P35281	RAB10_RAT	Rab10	Ras-related protein Rab-10	1	FHTITTSYYR	FHTITTSYYR	2	FHTITTSYYR2	130141	100075	112529
P35281	P35281	RAB10_RAT	Rab10	Ras-related protein Rab-10	1	FHTITTSYYR	FHTITTSYYR	3	FHTITTSYYR3	165853	192487	206980
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	FHTLPPFNIPR	FHTLPPFNIPR	2	FHTLPPFNIPR2		7095.08	
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	FHTLPPFNIPR	FHTLPPFNIPR	3	FHTLPPFNIPR3	38180	39681.2	48754.5
F1MAA7	A0A0G2K023;F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	0	FHTSRPESFAIYK	FHTSRPESFAIYK	3	FHTSRPESFAIYK3	67248.6	65566.7	74833
F1MAA7	A0A0G2K023;F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	0	FHTSRPESFAIYK	FHTSRPESFAIYK	4	FHTSRPESFAIYK4	65437.1	76329.6	64487.3
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	FHTSYDK	FHTSYDK	1	FHTSYDK1	1881.59	3178.41	
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	FHTSYDK	FHTSYDK	2	FHTSYDK2		111661	
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	FHVDISLTQFIQEYSHLQPGDHLTDITLK	FHVDISLTQFIQEYSHLQPGDHLTDITLK	4	FHVDISLTQFIQEYSHLQPGDHLTDITLK4	5613.42	6443.43	3718.74
P16617	Q5XIV1;P16617	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	0	FHVEEEGK	FHVEEEGK	2	FHVEEEGK2	54631.5	29398.4	35032.4
P16617	Q5XIV1;P16617	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	0	FHVEEEGKGK	FHVEEEGKGK	2	FHVEEEGKGK2	29680.3	24376.3	25924.1
P16617	Q5XIV1;P16617	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	0	FHVEEEGKGK	FHVEEEGKGK	3	FHVEEEGKGK3	60555	51384.9	67116.6
A0A8I5Y9A0	A0A8I5Y9A0	A0A8I5Y9A0_RAT	Tex264	Testis expressed 264	1	FHVGPYGDTGQLFTESCSISPK	FHVGPYGDTGQLFTESC(UniMod:4)SISPK	3	FHVGPYGDTGQLFTESC(UniMod:4)SISPK3	7532.95	11250.7	17874
F7EYC4	F7EYC4	F7EYC4_RAT	Tom1	Target of myb1 membrane trafficking protein	1	FHVLVASQDFVENVLVR	FHVLVASQDFVENVLVR	3	FHVLVASQDFVENVLVR3		14050.4	
A0A0G2K762	A0A0G2K762	A0A0G2K762_RAT	Abcf2	ATP binding cassette subfamily F member 2	1	FHWEQDQIAHMK	FHWEQDQIAHMK	3	FHWEQDQIAHMK3	2640.77	3055.58	
A0A8I6AEL0	A0A8I6AEL0;F1LUY7	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	0	FHYAFALNR	FHYAFALNR	2	FHYAFALNR2	7279.18	4351.1	7108.6
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	FHYGFNSNYMK	FHYGFNSNYMK	3	FHYGFNSNYMK3	14896.6	17646.9	18990.2
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	FHYGTHYSNAAGVMHYLIR	FHYGTHYSNAAGVMHYLIR	3	FHYGTHYSNAAGVMHYLIR3	3271.45	3361.04	3813.26
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	FHYGTHYSNAAGVMHYLIR	FHYGTHYSNAAGVMHYLIR	4	FHYGTHYSNAAGVMHYLIR4	26641.8	34237.4	28077.8
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	FHYLLNPK	FHYLLNPK	2	FHYLLNPK2	7944.18	5431.21	6083
B2RYU6	B2RYU6	TPC2L_RAT	Trappc2l	Trafficking protein particle complex subunit 2-like protein	1	FHYMVHTSLDVVDEK	FHYMVHTSLDVVDEK	3	FHYMVHTSLDVVDEK3	1460.46	3201.56	
Q03348	Q03348;B2GV87	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	0	FIAAQGPK	FIAAQGPK	2	FIAAQGPK2	93515.4	101117	102358
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	FIADCYTR	FIADC(UniMod:4)YTR	2	FIADC(UniMod:4)YTR2	22790.5	26127.4	17176.7
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	FIAEGIIDQGGGFR	FIAEGIIDQGGGFR	2	FIAEGIIDQGGGFR2	18126.3	9437.82	21149.6
D3ZDK7	D3ZDK7	PGP_RAT	Pgp	Glycerol-3-phosphate phosphatase	1	FIAGTGCLVR	FIAGTGC(UniMod:4)LVR	2	FIAGTGC(UniMod:4)LVR2	19544.1	10847	11545.8
B4F767	B4F767	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	1	FIAMALYHGK	FIAMALYHGK	3	FIAMALYHGK3	5491.57	4046.27	6007.75
P16391	P16391	HA12_RAT		RT1 class I histocompatibility antigen, AA alpha chain	1	FIAVGYVDDTEFVR	FIAVGYVDDTEFVR	2	FIAVGYVDDTEFVR2	472156	486681	505914
A0A8I5ZQE4	A0A8I5ZQE4	A0A8I5ZQE4_RAT	Supt5h	Transcription elongation factor SPT5	1	FIAYQFTDTPLQIK	FIAYQFTDTPLQIK	2	FIAYQFTDTPLQIK2	3671.45	3677.45	5886.68
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	FICEQEHEK	FIC(UniMod:4)EQEHEK	2	FIC(UniMod:4)EQEHEK2	20192.4	16823	7524.28
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	FICEQEHEK	FIC(UniMod:4)EQEHEK	3	FIC(UniMod:4)EQEHEK3	99853.3	123694	140666
A0A8I5ZX76	A0A8I5ZX76	A0A8I5ZX76_RAT	Eif3k	Eukaryotic translation initiation factor 3 subunit K	1	FICHVVGITYQHIDR	FIC(UniMod:4)HVVGITYQHIDR	4	FIC(UniMod:4)HVVGITYQHIDR4	7939.68	11517.9	
B2RZ66	B2RZ66	B2RZ66_RAT	Srp19	Signal recognition particle 19 kDa protein	1	FICIYPAYLNNK	FIC(UniMod:4)IYPAYLNNK	2	FIC(UniMod:4)IYPAYLNNK2		3465.75	4058.55
Q9Z244	Q9Z244	GMPR1_RAT	Gmpr	GMP reductase 1	1	FICLDVANGYSEHFVEFVK	FIC(UniMod:4)LDVANGYSEHFVEFVK	3	FIC(UniMod:4)LDVANGYSEHFVEFVK3	40787.8	34835.3	37220
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	FICNGDIYPGTPK	FIC(UniMod:4)NGDIYPGTPK	2	FIC(UniMod:4)NGDIYPGTPK2	10607.4	12614.1	9296.65
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	FICVTPTTCSNTIDLPMSPR	FIC(UniMod:4)VTPTTC(UniMod:4)SNTIDLPMSPR	3	FIC(UniMod:4)VTPTTC(UniMod:4)SNTIDLPMSPR3	1377.43	2766.13	2404.92
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	FIDDTMR	FIDDTMR	2	FIDDTMR2	37961	59649	45730.4
B5DEI0	B5DEI0	B5DEI0_RAT	Pcyox1l	Pcyox1l protein	1	FIDDVVSAVLR	FIDDVVSAVLR	2	FIDDVVSAVLR2	144011	67595.9	79885.3
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	FIDEHATK	FIDEHATK	1	FIDEHATK1	2764.46	1778.72	
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	FIDEHATK	FIDEHATK	2	FIDEHATK2	508849	472581	442781
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	FIDEHATKR	FIDEHATKR	2	FIDEHATKR2	40533.3	38508.4	40923.3
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	FIDFLAIEMR	FIDFLAIEMR	2	FIDFLAIEMR2	14287.8	18714.2	10762.7
D4ADE5	D4ADE5	D4ADE5_RAT	Setd7	Histone-lysine N-methyltransferase SETD7	1	FIDGEMLEGK	FIDGEMLEGK	2	FIDGEMLEGK2	12063.4	11376.4	11976.5
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	FIDIAAAK	FIDIAAAK	2	FIDIAAAK2	151988	93764.4	141684
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	FIDLDGLSCILNFLK	FIDLDGLSC(UniMod:4)ILNFLK	2	FIDLDGLSC(UniMod:4)ILNFLK2		8573.71	
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	FIDLDGLSCILNFLK	FIDLDGLSC(UniMod:4)ILNFLK	3	FIDLDGLSC(UniMod:4)ILNFLK3	1466.99		
P01150	P01150	TRH_RAT	Trh	Pro-thyrotropin-releasing hormone	1	FIDPELQR	FIDPELQR	2	FIDPELQR2	7482.14	4039.21	5834.18
D3ZWG9	D3ZWG9	D3ZWG9_RAT	Ptar1	Protein prenyltransferase alpha subunit repeat containing 1	1	FIDQVLSTCR	FIDQVLSTC(UniMod:4)R	2	FIDQVLSTC(UniMod:4)R2	4438.25	3733.18	
A0A0G2K9T1	F7FIK1;A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	0	FIDTGFSLPFYK	FIDTGFSLPFYK	2	FIDTGFSLPFYK2	20812.8	7812.81	6422.69
B4F767	B4F767	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	1	FIDTGFTLPFYK	FIDTGFTLPFYK	2	FIDTGFTLPFYK2	19819.9	10823.1	16609.6
Q9WVA1	F1M556;Q9WVA1;D3ZV76	TIM8A_RAT	Timm8a	Mitochondrial import inner membrane translocase subunit Tim8 A	0	FIDTSQFILNR	FIDTSQFILNR	2	FIDTSQFILNR2	56826.3	52958.8	53639.1
P21531	D4A9G1;P21531	RL3_RAT	Rpl3	Large ribosomal subunit protein uL3	0	FIDTTSK	FIDTTSK	2	FIDTTSK2	37844	33400.7	48165
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	FIEAAQR	FIEAAQR	2	FIEAAQR2	261558	265959	278620
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	FIEAGQYNNHLYGTSVQSVR	FIEAGQYNNHLYGTSVQSVR	3	FIEAGQYNNHLYGTSVQSVR3	27643	29829.3	39892.1
P31016	P31016	DLG4_RAT	Dlg4	Disks large homolog 4	1	FIEAGQYNSHLYGTSVQSVR	FIEAGQYNSHLYGTSVQSVR	3	FIEAGQYNSHLYGTSVQSVR3	3867.5	1862.39	1436.49
D4AEP0	D4AEP0	D4AEP0_RAT	Adss	Adenylosuccinate synthetase isozyme 2	1	FIEDELQIPVK	FIEDELQIPVK	2	FIEDELQIPVK2	27088.8	29915.8	26872.9
Q6AYS7	Q6AYS7	ACY1A_RAT	Acy1a	Aminoacylase-1A	1	FIEDTAAEK	FIEDTAAEK	2	FIEDTAAEK2	7568.17	7050.66	6504.76
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	FIEFEDSQEQEK	FIEFEDSQEQEK	2	FIEFEDSQEQEK2	24600.7	34840.9	32895.7
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	FIEFEDSQEQEKK	FIEFEDSQEQEKK	3	FIEFEDSQEQEKK3	9119.4	25880.4	18367.8
Q3SWU0	Q3SWU0	TRBP2_RAT	Tarbp2	RISC-loading complex subunit TARBP2	1	FIEIGSGTSK	FIEIGSGTSK	2	FIEIGSGTSK2	12085.9	9461.62	22313.9
Q62867	Q62867	GGH_RAT	Ggh	Gamma-glutamyl hydrolase	1	FIESAGAR	FIESAGAR	2	FIESAGAR2	39322.7	47455.2	64816.7
P26817	P26817	ARBK1_RAT	Grk2	Beta-adrenergic receptor kinase 1	1	FIESDKFTR	FIESDKFTR	3	FIESDKFTR3	3714.23	11893.9	7736.08
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	FIEYGEYK	FIEYGEYK	2	FIEYGEYK2	35143.6	49533.7	34405.7
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	FIFELIQNADTYSKPVPHQHEL	FIFELIQNADTYSKPVPHQHEL	3	FIFELIQNADTYSKPVPHQHEL3	10917.8	12116	14830.5
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	FIFELIQNADTYSKPVPHQHEL	FIFELIQNADTYSKPVPHQHEL	4	FIFELIQNADTYSKPVPHQHEL4	53108.8	51980	68265.7
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	FIFGNQDLFATSQNK	FIFGNQDLFATSQNK	2	FIFGNQDLFATSQNK2	21109.2	13084.3	15659.9
Q63616	Q63616	VP33B_RAT	Vps33b	Vacuolar protein sorting-associated protein 33B	1	FIFLTTAVTNSAR	FIFLTTAVTNSAR	2	FIFLTTAVTNSAR2	9246.22	5942.68	8347.86
M0RD03	M0RD03;A0A8I6AMY8	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	0	FIGELFK	FIGELFK	1	FIGELFK1	3319.07	1917.29	2705.94
M0RD03	M0RD03;A0A8I6AMY8	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	0	FIGELFK	FIGELFK	2	FIGELFK2	373147	464029	405906
A0A8I6AGS4	A0A8I6AGS4	A0A8I6AGS4_RAT	Abi3bp	ABI family member 3 binding protein	1	FIGPHVR	FIGPHVR	2	FIGPHVR2	18652.4	14410.4	6631.48
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	FIGPLPR	FIGPLPR	2	FIGPLPR2	77489.3	105131	94294.2
P52873	P52873	PYC_RAT	Pc	Pyruvate carboxylase, mitochondrial	1	FIGPSPEVVR	FIGPSPEVVR	2	FIGPSPEVVR2	14315.6	11388.4	11037.8
A0A8I6AVW1	A0A0G2K9L1;A0A8I6AK51;A0A8I6AVW1	A0A8I6AVW1_RAT	ENSRNOG00000064582	Ig-like domain-containing protein	0	FIGSGSGTDFTLK	FIGSGSGTDFTLK	2	FIGSGSGTDFTLK2	820224	802236	824433
A0A8I5ZSR7	A0A8I5ZSR7	A0A8I5ZSR7_RAT	ENSRNOG00000070662	Ig-like domain-containing protein	1	FIGSGSGTDFTLTIR	FIGSGSGTDFTLTIR	2	FIGSGSGTDFTLTIR2	6171.17	4728.14	7168.25
Q9WTT2	Q9WTT2	CLPB_RAT	Clpb	Mitochondrial disaggregase	1	FIGSPPGYIGHEEGGQLTK	FIGSPPGYIGHEEGGQLTK	3	FIGSPPGYIGHEEGGQLTK3	10423.5	6731.84	15830.8
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	FIGYTLGSDTDTVVGLPRPIHESIK	FIGYTLGSDTDTVVGLPRPIHESIK	3	FIGYTLGSDTDTVVGLPRPIHESIK3	19250.4	30815.5	16923.3
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	FIGYTLGSDTDTVVGLPRPIHESIK	FIGYTLGSDTDTVVGLPRPIHESIK	4	FIGYTLGSDTDTVVGLPRPIHESIK4	78603	76467.4	79554.7
P32089	P32089	TXTP_RAT	Slc25a1	Tricarboxylate transport protein, mitochondrial	1	FIHDQTSSNPK	FIHDQTSSNPK	2	FIHDQTSSNPK2	25122.5	17682.3	26389.1
P32089	P32089	TXTP_RAT	Slc25a1	Tricarboxylate transport protein, mitochondrial	1	FIHDQTSSNPK	FIHDQTSSNPK	3	FIHDQTSSNPK3	95131.4	64360.3	82379.5
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	FIHDTGLR	FIHDTGLR	2	FIHDTGLR2	16631.6	8110.8	12543.2
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	FIHKPGSYIFR	FIHKPGSYIFR	3	FIHKPGSYIFR3	33424.8	37387.3	29348.7
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	FIHVSHLNASMK	FIHVSHLNASMK	3	FIHVSHLNASMK3	15029.7	9148.78	13643.2
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	FIIDEELFGQTHQHELK	FIIDEELFGQTHQHELK	3	FIIDEELFGQTHQHELK3	141066	152959	135862
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	FIIDEELFGQTHQHELK	FIIDEELFGQTHQHELK	4	FIIDEELFGQTHQHELK4	209410	229853	243070
Q03555	Q03555	GEPH_RAT	Gphn	Gephyrin	1	FIIGESQAGEQPTQTVMPGQVMR	FIIGESQAGEQPTQTVMPGQVMR	3	FIIGESQAGEQPTQTVMPGQVMR3	4652.06	4542.8	7885.49
Q3T1K5	Q3T1K5	CAZA2_RAT	Capza2	F-actin-capping protein subunit alpha-2	1	FIIHAPPGEFNEVFNDVR	FIIHAPPGEFNEVFNDVR	3	FIIHAPPGEFNEVFNDVR3	295786	326060	328335
E9PU03	E9PU03	E9PU03_RAT	Smg5	Nonsense-mediated mRNA decay factor	1	FIIIIPR	FIIIIPR	2	FIIIIPR2	22184.4	24290.1	28795.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	FIIPGLK	FIIPGLK	1	FIIPGLK1	30486.4	52355	36793.7
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	FIIPGLK	FIIPGLK	2	FIIPGLK2	1.28951e+06	1.45525e+06	1.41407e+06
P04642	P04642	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	1	FIIPNVVK	FIIPNVVK	1	FIIPNVVK1	16932.9	6579.66	9250.82
P04642	P04642	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	1	FIIPNVVK	FIIPNVVK	2	FIIPNVVK2	2.90042e+06	2.70546e+06	2.87018e+06
P42123	P42123	LDHB_RAT	Ldhb	L-lactate dehydrogenase B chain	1	FIIPQIVK	FIIPQIVK	2	FIIPQIVK2	53515.6	28851.8	29909.1
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	FIIQSEKPPHYLESR	FIIQSEKPPHYLESR	4	FIIQSEKPPHYLESR4	7137.69	4602.68	5181.84
A0A8I6A1Z5	A0A8I6A1Z5	A0A8I6A1Z5_RAT	Tmx1	Thioredoxin-related transmembrane protein 1	1	FIITALPSIYHCK	FIITALPSIYHC(UniMod:4)K	2	FIITALPSIYHC(UniMod:4)K2	50712.4	71782	51655.5
A0A8I6A1Z5	A0A8I6A1Z5	A0A8I6A1Z5_RAT	Tmx1	Thioredoxin-related transmembrane protein 1	1	FIITALPSIYHCK	FIITALPSIYHC(UniMod:4)K	3	FIITALPSIYHC(UniMod:4)K3	115489	119609	127693
A0A0G2JTX7	A0A0G2JTX7	A0A0G2JTX7_RAT	Col6a5	Collagen type VI alpha 5 chain	1	FIKPFVHSIR	FIKPFVHSIR	3	FIKPFVHSIR3	8911.61	19102.7	8587.96
Q68FW9	Q68FW9	CSN3_RAT	Cops3	COP9 signalosome complex subunit 3	1	FIKPLSNAYHELAQVYSTNNPSELR	FIKPLSNAYHELAQVYSTNNPSELR	3	FIKPLSNAYHELAQVYSTNNPSELR3	30991.1	30093.4	40797.5
Q68FW9	Q68FW9	CSN3_RAT	Cops3	COP9 signalosome complex subunit 3	1	FIKPLSNAYHELAQVYSTNNPSELR	FIKPLSNAYHELAQVYSTNNPSELR	4	FIKPLSNAYHELAQVYSTNNPSELR4	131472	112740	131677
Q9EQV9	Q9EQV9	CBPB2_RAT	Cpb2	Carboxypeptidase B2	1	FIKPTCAEALAAVSK	FIKPTC(UniMod:4)AEALAAVSK	3	FIKPTC(UniMod:4)AEALAAVSK3	75372.5	83121.4	84813.8
Q4KLH3	Q4KLH3	OGRL1_RAT	Ogfrl1	Opioid growth factor receptor-like protein 1	1	FILHEALVENTIPNIK	FILHEALVENTIPNIK	2	FILHEALVENTIPNIK2	7489.35	4103.7	5084.94
Q4KLH3	Q4KLH3	OGRL1_RAT	Ogfrl1	Opioid growth factor receptor-like protein 1	1	FILHEALVENTIPNIK	FILHEALVENTIPNIK	3	FILHEALVENTIPNIK3	34432.1	37244.4	26141
P62744	P62744	AP2S1_RAT	Ap2s1	AP-2 complex subunit sigma	1	FILIQNR	FILIQNR	2	FILIQNR2	175863	145237	124306
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	FILLDCATPDAVVR	FILLDC(UniMod:4)ATPDAVVR	2	FILLDC(UniMod:4)ATPDAVVR2	10095	7875.75	4267.13
A0A1B0GWT7	A0A1B0GWT7;A0A8I6ADH7	A0A1B0GWT7_RAT	Lamtor2	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2	0	FILMDCMEGR	FILMDC(UniMod:4)MEGR	2	FILMDC(UniMod:4)MEGR2	44467.5	45693.4	43096.4
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	FILNLPTFSVR	FILNLPTFSVR	2	FILNLPTFSVR2	1.23181e+06	999644	1.07454e+06
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	FILPEGASQGMTPFR	FILPEGASQGMTPFR	2	FILPEGASQGMTPFR2	103448	102334	113157
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	FILPEGASQGMTPFR	FILPEGASQGMTPFR	3	FILPEGASQGMTPFR3	3712.25	6601.89	9631.11
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	FILQDMGSDVIPEDEDEK	FILQDMGSDVIPEDEDEK	3	FILQDMGSDVIPEDEDEK3	222395	229569	218725
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	FILREDPAYLHYYDPAGGEDPLGAIHLR	FILREDPAYLHYYDPAGGEDPLGAIHLR	4	FILREDPAYLHYYDPAGGEDPLGAIHLR4	93985.2	97591.7	67218.9
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	FILSCADDK	FILSC(UniMod:4)ADDK	2	FILSC(UniMod:4)ADDK2	53902.1	60660.4	56284.5
A0A8I5Y5Z6	A0A8I5Y5Z6	A0A8I5Y5Z6_RAT	Xrcc4	X-ray repair cross complementing 4	1	FILVLNEK	FILVLNEK	2	FILVLNEK2	5480.5	12066.6	9481.41
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	FILYGLIGK	FILYGLIGK	2	FILYGLIGK2	17658	18037.8	12518.2
P60570	P60570	PANX1_RAT	Panx1	Pannexin-1	1	FIMEELDK	FIMEELDK	2	FIMEELDK2	152863	159250	142457
P60570	P60570	PANX1_RAT	Panx1	Pannexin-1	1	FIMEELDKVYNR	FIMEELDKVYNR	3	FIMEELDKVYNR3	27240.6	34807.1	24115.5
P62909	P62909	RS3_RAT	Rps3	Small ribosomal subunit protein uS3	1	FIMESGAK	FIMESGAK	2	FIMESGAK2	65014.5	66341.4	53472.6
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	FIMGDSSVQDQWK	FIMGDSSVQDQWK	2	FIMGDSSVQDQWK2	79375.3	86834.3	105076
D3ZTY0	D3ZTY0	D3ZTY0_RAT	Cnih4	Cornichon family AMPA receptor auxiliary protein 4	1	FIMVPSGNMGVFDPTEIHNR	FIMVPSGNMGVFDPTEIHNR	3	FIMVPSGNMGVFDPTEIHNR3	12854	26224	22373.3
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	FINDCTK	FINDC(UniMod:4)TK	2	FINDC(UniMod:4)TK2	81064.7	67625.2	63849.4
Q9QZR6	Q9QZR6	SEPT9_RAT	Septin9	Septin-9	1	FINDQYEK	FINDQYEK	2	FINDQYEK2	12270.4	14864.7	12491.7
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	FINDYGTHYITSGTMGGIYEYVLVLDKEK	FINDYGTHYITSGTMGGIYEYVLVLDKEK	4	FINDYGTHYITSGTMGGIYEYVLVLDKEK4	17983.7	15262.4	32232.8
P05545	A0A0G2JSK1;P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	0	FINDYVSNQTQGK	FINDYVSNQTQGK	2	FINDYVSNQTQGK2	19491.9	11787.9	18993.2
Q5XI41	Q5XI41	TRAM1_RAT	Tram1	Translocating chain-associated membrane protein 1	1	FINFQLR	FINFQLR	2	FINFQLR2	129600	126716	102673
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	FINLFPETK	FINLFPETK	2	FINLFPETK2		17890.2	13738
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	FINLNGLQHEGIFR	FINLNGLQHEGIFR	3	FINLNGLQHEGIFR3	40056.8	36185.2	32679.9
Q505J9	Q505J9	ATAD1_RAT	Atad1	Outer mitochondrial transmembrane helix translocase	1	FINLQPSTLTDK	FINLQPSTLTDK	2	FINLQPSTLTDK2	57894.6	46594.5	50519.6
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	FINLYGLQQQGIFR	FINLYGLQQQGIFR	2	FINLYGLQQQGIFR2	42550.7	50509.2	56277.3
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	FINLYGLQQQGIFR	FINLYGLQQQGIFR	3	FINLYGLQQQGIFR3	8568.28	10402.3	11466.3
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	FINMFAVLDELK	FINMFAVLDELK	2	FINMFAVLDELK2	205930		
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	FINNNAVTK	FINNNAVTK	2	FINNNAVTK2	228586	252335	210727
A0A0G2KAU4	A0A0G2KAU4	A0A0G2KAU4_RAT	Rasgrp3	RAS guanyl releasing protein 3	1	FINVAQK	FINVAQK	2	FINVAQK2	22538.3	17924.4	24229.3
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	FINYFGFHEYLQGIHK	FINYFGFHEYLQGIHK	4	FINYFGFHEYLQGIHK4	7469.32	3129.03	4285.27
Q66H59	Q66H59	NPL_RAT	Npl	N-acetylneuraminate lyase	1	FINYVIK	FINYVIK	2	FINYVIK2	55447.1	56906.2	55003.6
D4A8N1	D4A8N1	D4A8N1_RAT	Dpm1	Dolichol-phosphate mannosyltransferase subunit 1	1	FIPEFIR	FIPEFIR	2	FIPEFIR2	110326	125271	118067
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	FIPFIGVVK	FIPFIGVVK	2	FIPFIGVVK2	81815.6	83460.6	93988.1
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	FIPGAALNSMMDMLDR	FIPGAALNSMMDMLDR	2	FIPGAALNSMMDMLDR2	48953.2	31611.6	23157.3
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	FIPGAALNSMMDMLDR	FIPGAALNSMMDMLDR	3	FIPGAALNSMMDMLDR3	2154.27	3780.47	5238.95
Q63198	Q63198	CNTN1_RAT	Cntn1	Contactin-1	1	FIPLIPIPER	FIPLIPIPER	2	FIPLIPIPER2	15356	16096.8	11956.5
Q9JKE3	Q9JKE3	SCAM5_RAT	Scamp5	Secretory carrier-associated membrane protein 5	1	FIPLKPCFYQDFEADIPPQHLSLTK	FIPLKPC(UniMod:4)FYQDFEADIPPQHLSLTK	4	FIPLKPC(UniMod:4)FYQDFEADIPPQHLSLTK4	35914	41626.5	34003.2
Q6P4Z9	Q6P4Z9	CSN8_RAT	Cops8	COP9 signalosome complex subunit 8	1	FIPLSEPAPVPPIPNEQQLAR	FIPLSEPAPVPPIPNEQQLAR	3	FIPLSEPAPVPPIPNEQQLAR3	198637	181494	208573
Q3KR59	Q3KR59	UBP10_RAT	Usp10	Ubiquitin carboxyl-terminal hydrolase 10	1	FIPLYSK	FIPLYSK	2	FIPLYSK2	40321	40045.3	31368.9
Q8K4Y7	Q8K4Y7	CANT1_RAT	Cant1	Soluble calcium-activated nucleotidase 1	1	FIPNTDDQIIVALK	FIPNTDDQIIVALK	2	FIPNTDDQIIVALK2	19457	15403.3	12250
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	FIPPSYSVK	FIPPSYSVK	2	FIPPSYSVK2	148172	189744	147121
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	FIPTSIFVKPQGR	FIPTSIFVKPQGR	3	FIPTSIFVKPQGR3	62806.3	73709.3	78547.7
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	FIPYTEEFSEK	FIPYTEEFSEK	2	FIPYTEEFSEK2	80383.7	83379	74383.9
D3ZZC5	D3ZZC5	D3ZZC5_RAT	Tradd	Tumor necrosis factor receptor type 1-associated DEATH domain protein	1	FIQAEGR	FIQAEGR	2	FIQAEGR2	21079.1	25229.5	25300.1
Q05982	Q05982	NDKA_RAT	Nme1	Nucleoside diphosphate kinase A	1	FIQASEDLLK	FIQASEDLLK	2	FIQASEDLLK2	55522.4	52953.3	65596.2
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	FIQAWQSLPDFGISYVIVR	FIQAWQSLPDFGISYVIVR	3	FIQAWQSLPDFGISYVIVR3	18344.3	21996.2	31388
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	FIQESIFGLCPHMTEDNK	FIQESIFGLC(UniMod:4)PHMTEDNK	3	FIQESIFGLC(UniMod:4)PHMTEDNK3	70486.4	84975.2	77722.3
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	FIQESIFGLCPHMTEDNKDLIQGK	FIQESIFGLC(UniMod:4)PHMTEDNKDLIQGK	3	FIQESIFGLC(UniMod:4)PHMTEDNKDLIQGK3	47119.9	43653.4	24239.6
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	FIQESIFGLCPHMTEDNKDLIQGK	FIQESIFGLC(UniMod:4)PHMTEDNKDLIQGK	4	FIQESIFGLC(UniMod:4)PHMTEDNKDLIQGK4	126781	117818	138408
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	FIQEVVQSQQAAVTR	FIQEVVQSQQAAVTR	2	FIQEVVQSQQAAVTR2	7139.28	5325.39	6194.54
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	FIQEVVQSQQAAVTR	FIQEVVQSQQAAVTR	3	FIQEVVQSQQAAVTR3	9202.13	21559.7	18901.1
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	FIQLLSDQSDQSVLIQK	FIQLLSDQSDQSVLIQK	3	FIQLLSDQSDQSVLIQK3	2627.48	1928.96	1307.5
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	FIQLVQK	FIQLVQK	2	FIQLVQK2	50094.8	36368	51051.5
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	FIQPNIGELPTALK	FIQPNIGELPTALK	2	FIQPNIGELPTALK2	179178	196425	199078
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	FIQPNIGELPTALK	FIQPNIGELPTALK	3	FIQPNIGELPTALK3	1804.89	2388.44	3264.37
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	FIQQFSQCK	FIQQFSQC(UniMod:4)K	2	FIQQFSQC(UniMod:4)K2	57504.1	61638.7	67687.9
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	FIQQTYPSGGEEQAQYCR	FIQQTYPSGGEEQAQYC(UniMod:4)R	3	FIQQTYPSGGEEQAQYC(UniMod:4)R3	18190	24945.9	27841.7
A0A8I5ZK89	A0A8I5ZK89	A0A8I5ZK89_RAT	Dock5	Dedicator of cytokinesis 5	1	FIQSIPDNQLVR	FIQSIPDNQLVR	2	FIQSIPDNQLVR2	7089.97		9895.01
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	FIQSTGQPVPLVVK	FIQSTGQPVPLVVK	2	FIQSTGQPVPLVVK2	44348.9	51835.2	48781.5
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	FIQVNYLESGIVR	FIQVNYLESGIVR	2	FIQVNYLESGIVR2	35878	35659.4	43442
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	FIQVNYLESGIVR	FIQVNYLESGIVR	3	FIQVNYLESGIVR3	4647.89	9484.36	5553.92
O55012	Q05140;O55012	PICAL_RAT	Picalm	Phosphatidylinositol-binding clathrin assembly protein	0	FIQYLASR	FIQYLASR	2	FIQYLASR2	47578.7	41488.6	40346.4
A0A8I5ZRV3	A0A8I5ZRV3	A0A8I5ZRV3_RAT	Fam3a	FAM3 metabolism regulating signaling molecule A	1	FIRPLHEGTLVFVASYDDPATK	FIRPLHEGTLVFVASYDDPATK	4	FIRPLHEGTLVFVASYDDPATK4	4279.44		3150.18
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	FISATDTIR	FISATDTIR	2	FISATDTIR2	40502.6	55961.1	39609.1
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	FISATDTIRK	FISATDTIRK	3	FISATDTIRK3	14032	15491.4	9994.2
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	FISDKDASVVGFFR	FISDKDASVVGFFR	2	FISDKDASVVGFFR2	15385.9	13887.4	15641.1
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	FISDKDASVVGFFR	FISDKDASVVGFFR	3	FISDKDASVVGFFR3	229980	256966	250324
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	FISELAR	FISELAR	2	FISELAR2	517834	537503	509039
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	FISGHTSELGDFR	FISGHTSELGDFR	2	FISGHTSELGDFR2		2580.28	1872.51
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	FISGHTSELGDFR	FISGHTSELGDFR	3	FISGHTSELGDFR3	59317.6	47887.9	59642.2
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	FISGSMAGATAQTFIYPMEVLK	FISGSMAGATAQTFIYPMEVLK	3	FISGSMAGATAQTFIYPMEVLK3	52675.9	60894.4	58771.4
Q64270	Q64270	EI2BA_RAT	Eif2b1	Translation initiation factor eIF-2B subunit alpha	1	FISLTSLEYSDYSK	FISLTSLEYSDYSK	2	FISLTSLEYSDYSK2	9895.01	12125.6	8995.59
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	FISNPNSIILAVTAANTDMATSEALK	FISNPNSIILAVTAANTDMATSEALK	3	FISNPNSIILAVTAANTDMATSEALK3	23854.7	19190.4	19136.1
Q0PMD2	Q0PMD2	ANTR1_RAT	Antxr1	Anthrax toxin receptor 1	1	FISPQLR	FISPQLR	2	FISPQLR2	115614	46362.2	51559.8
Q5XIJ5	Q5XIJ5	AB17A_RAT	Abhd17a	Alpha/beta hydrolase domain-containing protein 17A	1	FISQELPSQR	FISQELPSQR	2	FISQELPSQR2	22490.8	18823.4	26223.5
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	FISTDVHGIWSR	FISTDVHGIWSR	3	FISTDVHGIWSR3	78489.8	70049.2	68672.4
Q6P691	Q6P691	Q6P691_RAT	C2cd2	C2 calcium-dependent domain containing 2	1	FISTLVR	FISTLVR	2	FISTLVR2	35674.2	38800.1	40632.4
P15978	P15978	HA11_RAT	RT1-Aw2	Class I histocompatibility antigen, Non-RT1.A alpha-1 chain	1	FISVGYVDDTQFVR	FISVGYVDDTQFVR	2	FISVGYVDDTQFVR2	253995	217387	211318
P15978	P15978	HA11_RAT	RT1-Aw2	Class I histocompatibility antigen, Non-RT1.A alpha-1 chain	1	FISVGYVDDTQFVR	FISVGYVDDTQFVR	3	FISVGYVDDTQFVR3	4249.61	13790.7	
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	FITGNIPIENQR	FITGNIPIENQR	2	FITGNIPIENQR2	275142	253683	249227
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	FITGNIPIENQR	FITGNIPIENQR	3	FITGNIPIENQR3	13340	11433	6973.43
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	FITGTMDAGDGDSAVK	FITGTMDAGDGDSAVK	2	FITGTMDAGDGDSAVK2	14469.7	12190.5	15218.3
B2GUZ5	B2GUZ5	CAZA1_RAT	Capza1	F-actin-capping protein subunit alpha-1	1	FITHAPPGEFNEVFNDVR	FITHAPPGEFNEVFNDVR	3	FITHAPPGEFNEVFNDVR3	413411	434109	458948
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	FITHTPCTACAAIR	FITHTPC(UniMod:4)TAC(UniMod:4)AAIR	3	FITHTPC(UniMod:4)TAC(UniMod:4)AAIR3	4907.11	3499.99	
Q6Y1S1	Q6Y1S1	MYD88_RAT	Myd88	Myeloid differentiation primary response protein MyD88	1	FITICDYTNPCTK	FITIC(UniMod:4)DYTNPC(UniMod:4)TK	2	FITIC(UniMod:4)DYTNPC(UniMod:4)TK2	4731.71	7783.01	2811
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	FITNHSVTR	FITNHSVTR	2	FITNHSVTR2	226694	273940	227207
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	FITRPDVK	FITRPDVK	2	FITRPDVK2	12199.3	8036.69	5729.83
Q99P74	P23640;Q99P74	RB27B_RAT	Rab27b	Ras-related protein Rab-27B	0	FITTVGIDFR	FITTVGIDFR	2	FITTVGIDFR2	855080	808261	778134
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	FITVGWGSK	FITVGWGSK	2	FITVGWGSK2	21932.6	25158.9	30505.9
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	FITVNPAEK	FITVNPAEK	2	FITVNPAEK2	84094.7	100720	80720.2
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	FIVDGVEVSVTTSK	FIVDGVEVSVTTSK	2	FIVDGVEVSVTTSK2	30856.6	34997.5	28020.5
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	FIVDQTQTPNLK	FIVDQTQTPNLK	2	FIVDQTQTPNLK2	13859.3	10256.2	17610.5
Q5U2R7	Q5U2R7	MESD_RAT	Mesd	LRP chaperone MESD	1	FIVGSDR	FIVGSDR	2	FIVGSDR2	57455.9	62938.3	68373.3
B5DFE0	B5DFE0	B5DFE0_RAT	Pals2	Membrane palmitoylated protein 6	1	FIVLNPAR	FIVLNPAR	2	FIVLNPAR2	10102.2		14030.6
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	FIVLSNNYLQIR	FIVLSNNYLQIR	2	FIVLSNNYLQIR2	459960	430904	426745
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	FIVLSNNYLQIR	FIVLSNNYLQIR	3	FIVLSNNYLQIR3	31318.7	51743.7	47777.2
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	FIVNQVR	FIVNQVR	2	FIVNQVR2	121210	119250	117795
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	FIVSPVPESR	FIVSPVPESR	2	FIVSPVPESR2	29391.1	30434.7	37665.6
Q63228	Q63228	GMFB_RAT	Gmfb	Glia maturation factor beta	1	FIVYSYK	FIVYSYK	2	FIVYSYK2	52123.1	50228.3	44437.6
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	FIWSEISYLAK	FIWSEISYLAK	2	FIWSEISYLAK2	25542.5	27100.2	31222.9
B0BN72	B0BN72	MCRI1_RAT	Mcrip1	Mapk-regulated corepressor-interacting protein 1	1	FIYEAWQGVER	FIYEAWQGVER	2	FIYEAWQGVER2	9457.05	7480.77	13641
A0A140UHX9	A0A140UHX9	A0A140UHX9_RAT	Ccz1	CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated	1	FIYFNHMNLAEK	FIYFNHMNLAEK	3	FIYFNHMNLAEK3	26217.5	11876.8	19864.6
P15943	P15943	APLP2_RAT	Aplp2	Amyloid beta precursor like protein 2	1	FIYGGCGGNR	FIYGGC(UniMod:4)GGNR	2	FIYGGC(UniMod:4)GGNR2	130733	135462	151164
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	FIYMAVQHYIETLQR	FIYMAVQHYIETLQR	2	FIYMAVQHYIETLQR2	2964.53	6153	
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	FIYMAVQHYIETLQR	FIYMAVQHYIETLQR	3	FIYMAVQHYIETLQR3	74421.1	48776.4	48969.1
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	FIYNMEK	FIYNMEK	2	FIYNMEK2	145698	161253	126919
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	FIYVAIAQFIETTK	FIYVAIAQFIETTK	3	FIYVAIAQFIETTK3			4002.29
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	FIYVAIAQFIETTKK	FIYVAIAQFIETTKK	3	FIYVAIAQFIETTKK3	6184.1	2289.77	5116.98
F7EM42	F7EM42	F7EM42_RAT	Sash3	SAM and SH3 domain containing 3	1	FIYVDVLPEEAVGPVRPSR	FIYVDVLPEEAVGPVRPSR	3	FIYVDVLPEEAVGPVRPSR3	69627.8	96982.7	80565.6
P80386	P80386	AAKB1_RAT	Prkab1	5'-AMP-activated protein kinase subunit beta-1	1	FKAPPILPPHLLQVILNK	FKAPPILPPHLLQVILNK	3	FKAPPILPPHLLQVILNK3	13637.9	5965.19	
P80386	P80386	AAKB1_RAT	Prkab1	5'-AMP-activated protein kinase subunit beta-1	1	FKAPPILPPHLLQVILNK	FKAPPILPPHLLQVILNK	4	FKAPPILPPHLLQVILNK4	16632.5	21277.9	23879.1
Q04589	Q04589;A0A8I6A1Z2	FGFR1_RAT	Fgfr1	Fibroblast growth factor receptor 1	0	FKCPSSGTPSPTLR	FKC(UniMod:4)PSSGTPSPTLR	3	FKC(UniMod:4)PSSGTPSPTLR3	26850	33798.2	34056.2
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	FKDDITTIVNVVTSEIAALLVKPQK	FKDDITTIVNVVTSEIAALLVKPQK	3	FKDDITTIVNVVTSEIAALLVKPQK3	6253.59		
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	FKDIFQEIFDK	FKDIFQEIFDK	2	FKDIFQEIFDK2	20419	27320.4	24253
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	FKDIFQEIFDK	FKDIFQEIFDK	3	FKDIFQEIFDK3	124825	55131.2	85417.3
P41562	P41562	IDHC_RAT	Idh1	Isocitrate dehydrogenase [NADP] cytoplasmic	1	FKDIFQEIYDK	FKDIFQEIYDK	3	FKDIFQEIYDK3	7173.72	5089.45	8245.58
P02770	P02770	ALBU_RAT	Alb	Albumin	1	FKDLGEQHFK	FKDLGEQHFK	2	FKDLGEQHFK2	1.08935e+06	1.07417e+06	925966
P02770	P02770	ALBU_RAT	Alb	Albumin	1	FKDLGEQHFK	FKDLGEQHFK	3	FKDLGEQHFK3	5.00548e+06	5.16934e+06	4.90283e+06
P02770	P02770	ALBU_RAT	Alb	Albumin	1	FKDLGEQHFKGLVLIAFSQYLQK	FKDLGEQHFKGLVLIAFSQYLQK	3	FKDLGEQHFKGLVLIAFSQYLQK3	8414.8		3217.05
P02770	P02770	ALBU_RAT	Alb	Albumin	1	FKDLGEQHFKGLVLIAFSQYLQK	FKDLGEQHFKGLVLIAFSQYLQK	4	FKDLGEQHFKGLVLIAFSQYLQK4	68131.5	38553.6	56647.1
Q6P799	Q6P799	SYSC_RAT	Sars1	Serine--tRNA ligase, cytoplasmic	1	FKDPGLVDQLVK	FKDPGLVDQLVK	3	FKDPGLVDQLVK3	24538.3	31553.4	22547.8
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	FKDTYFVTGIVSWGEGCAR	FKDTYFVTGIVSWGEGC(UniMod:4)AR	3	FKDTYFVTGIVSWGEGC(UniMod:4)AR3	1.27241e+06	1.37835e+06	1.35717e+06
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	FKDTYFVTGIVSWGEGCAR	FKDTYFVTGIVSWGEGC(UniMod:4)AR	4	FKDTYFVTGIVSWGEGC(UniMod:4)AR4	33015.2	16213.6	31805
F1LN92	F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	1	FKDVAGCEEAK	FKDVAGC(UniMod:4)EEAK	2	FKDVAGC(UniMod:4)EEAK2	2440.89	4331.96	1590.83
F1LN92	F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	1	FKDVAGCEEAK	FKDVAGC(UniMod:4)EEAK	3	FKDVAGC(UniMod:4)EEAK3	8429.53	8480.38	11691.7
Q5QE80	Q5QE80	AOXC_RAT	Aox3	Aldehyde oxidase 3	1	FKDVSYPIIISPAR	FKDVSYPIIISPAR	3	FKDVSYPIIISPAR3		3697.5	2132.67
Q4V8A6	Q4V8A6	BL1S6_RAT	Bloc1s6	Biogenesis of lysosome-related organelles complex 1 subunit 6	1	FKECHSMLDINALFTEAK	FKEC(UniMod:4)HSMLDINALFTEAK	4	FKEC(UniMod:4)HSMLDINALFTEAK4	5173.12	10046.4	4996.95
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	FKEEYIQR	FKEEYIQR	2	FKEEYIQR2	35934.2	28217.7	23581.2
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	FKEGTEMENSK	FKEGTEMENSK	2	FKEGTEMENSK2	26585.5	11559.7	20301.5
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	FKEGTEMENSK	FKEGTEMENSK	3	FKEGTEMENSK3	71275.5	140787	72102.8
O35824	O35824	DNJA2_RAT	Dnaja2	DnaJ homolog subfamily A member 2	1	FKEISFAYEVLSNPEK	FKEISFAYEVLSNPEK	3	FKEISFAYEVLSNPEK3	3497.91		11856
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	FKELSTLR	FKELSTLR	2	FKELSTLR2	86450.6	74198	82130
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	FKEMTEALGPGTIR	FKEMTEALGPGTIR	2	FKEMTEALGPGTIR2	4346.03	2354.83	
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	FKEMTEALGPGTIR	FKEMTEALGPGTIR	3	FKEMTEALGPGTIR3	63517.8	50329.9	59119.6
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	FKEREENVK	FKEREENVK	3	FKEREENVK3			16327.4
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	FKESLVNVPLQLIESVECR	FKESLVNVPLQLIESVEC(UniMod:4)R	3	FKESLVNVPLQLIESVEC(UniMod:4)R3	6920.54	6550.25	3135.87
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	FKEVAEAYEVLSDK	FKEVAEAYEVLSDK	2	FKEVAEAYEVLSDK2	7560.5	9219.4	6916.71
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	FKEVAEAYEVLSDK	FKEVAEAYEVLSDK	3	FKEVAEAYEVLSDK3	85451.4	90432	88627.9
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	FKEVAEAYEVLSDKHK	FKEVAEAYEVLSDKHK	4	FKEVAEAYEVLSDKHK4	4714.54	2779.23	4570.14
Q9R0I8	O88377;Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	0	FKEYCPMVFR	FKEYC(UniMod:4)PMVFR	2	FKEYC(UniMod:4)PMVFR2	28678.7	29383.7	20828.2
Q9R0I8	O88377;Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	0	FKEYCPMVFR	FKEYC(UniMod:4)PMVFR	3	FKEYC(UniMod:4)PMVFR3	244798	314231	292191
O88370	O88370	PI42C_RAT	Pip4k2c	Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma	1	FKEYCPQVFR	FKEYC(UniMod:4)PQVFR	3	FKEYC(UniMod:4)PQVFR3	13907.3	10782.5	12407.7
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	FKEYVNGSNLITK	FKEYVNGSNLITK	3	FKEYVNGSNLITK3	5628.36	4777.95	2273.4
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	FKGPFTDVVTTNLK	FKGPFTDVVTTNLK	2	FKGPFTDVVTTNLK2	14667.7	25334.3	15722.9
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	FKGPFTDVVTTNLK	FKGPFTDVVTTNLK	3	FKGPFTDVVTTNLK3	328729	355046	373002
P27791	P27791	KAPCA_RAT	Prkaca	cAMP-dependent protein kinase catalytic subunit alpha	1	FKGPGDTSNFDDYEEEEIR	FKGPGDTSNFDDYEEEEIR	3	FKGPGDTSNFDDYEEEEIR3	20029.5	14552.2	20161.2
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	FKLPGQPPASMGR	FKLPGQPPASMGR	2	FKLPGQPPASMGR2	11005.3	7622.19	7459.55
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	FKLPGQPPASMGR	FKLPGQPPASMGR	3	FKLPGQPPASMGR3	113255	93370.7	110745
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	FKLPPGEYVLVPSTFEPHK	FKLPPGEYVLVPSTFEPHK	3	FKLPPGEYVLVPSTFEPHK3	452512	540014	432616
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	FKLPPGEYVLVPSTFEPHK	FKLPPGEYVLVPSTFEPHK	4	FKLPPGEYVLVPSTFEPHK4	1.64424e+06	1.98624e+06	1.80541e+06
Q505J8	Q505J8	SYFA_RAT	Farsa	Phenylalanine--tRNA ligase alpha subunit	1	FKPAYNPYTEPSMEVFSYHQGLK	FKPAYNPYTEPSMEVFSYHQGLK	4	FKPAYNPYTEPSMEVFSYHQGLK4	27415.1	11065.7	
D4A830	D4A830	D4A830_RAT	Ppa2	inorganic diphosphatase	1	FKPGYLEATVNWFR	FKPGYLEATVNWFR	3	FKPGYLEATVNWFR3	8656.81	9262.28	
Q9R0C5	Q9R0C5	GALT7_RAT	Galnt7	N-acetylgalactosaminyltransferase 7	1	FKPVVPWPHVEGVEVDLESIR	FKPVVPWPHVEGVEVDLESIR	4	FKPVVPWPHVEGVEVDLESIR4	4408.39	4562.81	8346.89
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	FKPYCSFDK	FKPYC(UniMod:4)SFDK	2	FKPYC(UniMod:4)SFDK2		9974.68	11353.3
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	FKPYCSFDK	FKPYC(UniMod:4)SFDK	3	FKPYC(UniMod:4)SFDK3	25477.5	34009.4	32352.9
Q5XI64	Q5XI64	ABHD6_RAT	Abhd6	Monoacylglycerol lipase ABHD6	1	FKVPQQILQGLVDVR	FKVPQQILQGLVDVR	3	FKVPQQILQGLVDVR3	25655.4	32311.4	28880.8
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	FKYPNTACELLTCDVPQISDR	FKYPNTAC(UniMod:4)ELLTC(UniMod:4)DVPQISDR	3	FKYPNTAC(UniMod:4)ELLTC(UniMod:4)DVPQISDR3	10217.7	13151.4	8307.96
P38983	P38983	RSSA_RAT	Rpsa	Small ribosomal subunit protein uS2	1	FLAAGTHLGGTNLDFQMEQYIYK	FLAAGTHLGGTNLDFQMEQYIYK	3	FLAAGTHLGGTNLDFQMEQYIYK3	23223	7788.73	
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	FLAAPPNGNFADAVFR	FLAAPPNGNFADAVFR	2	FLAAPPNGNFADAVFR2	19128	23452.5	27200.1
A0A0G2K2B7	A0A0G2K2B7	A0A0G2K2B7_RAT	Wdr20	WD repeat domain 20	1	FLACVSQDGFLR	FLAC(UniMod:4)VSQDGFLR	2	FLAC(UniMod:4)VSQDGFLR2		8570.77	1907.09
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	FLADDFDVK	FLADDFDVK	2	FLADDFDVK2	39907.3	55913.7	43057.1
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	FLADFRDLTSWVTEMK	FLADFRDLTSWVTEMK	3	FLADFRDLTSWVTEMK3			4879.21
A0A8I6A6H8	A0A8I6A6H8	A0A8I6A6H8_RAT	Serpinb6a	Serpin family B member 6A	1	FLADHPFLFFIQHVK	FLADHPFLFFIQHVK	3	FLADHPFLFFIQHVK3	47413.1	72858.7	81629.1
A0A8I6A6H8	A0A8I6A6H8	A0A8I6A6H8_RAT	Serpinb6a	Serpin family B member 6A	1	FLADHPFLFFIQHVK	FLADHPFLFFIQHVK	4	FLADHPFLFFIQHVK4	77303.1	66405.3	67932.1
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	FLADYKR	FLADYKR	2	FLADYKR2	15648.3	16461.5	21922.3
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	FLAEAAR	FLAEAAR	2	FLAEAAR2	127096	115162	117193
Q5XI83	Q5XI83	VP35L_RAT	Vps35l	VPS35 endosomal protein-sorting factor-like	1	FLAENSK	FLAENSK	2	FLAENSK2	26925.8	34306.7	30414
A0A8I5YC01	A0A8I5YC01	A0A8I5YC01_RAT	Gimap1	GTPase, IMAP family member 1	1	FLAGLWR	FLAGLWR	2	FLAGLWR2	27366.5	21678.3	21169.9
D3Z9Y3	D3Z9Y3	D3Z9Y3_RAT	Cerk	Ceramide kinase	1	FLAINSTNMSCACPR	FLAINSTNMSC(UniMod:4)AC(UniMod:4)PR	2	FLAINSTNMSC(UniMod:4)AC(UniMod:4)PR2	8504.3	6511.05	7161.65
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	FLALGDK	FLALGDK	2	FLALGDK2	27327.3	24827.3	33538.4
P23640	P23640	RB27A_RAT	Rab27a	Ras-related protein Rab-27A	1	FLALGDSGVGK	FLALGDSGVGK	2	FLALGDSGVGK2	458996	483392	521427
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	FLALGSK	FLALGSK	1	FLALGSK1	1542.39	3307.22	886.146
D3ZFJ3	D3ZFJ3	3BP1_RAT	Sh3bp1	SH3 domain-binding protein 1	1	FLALLAEEQDVNK	FLALLAEEQDVNK	2	FLALLAEEQDVNK2	16073.3	39709	46730.7
D3ZFJ3	D3ZFJ3	3BP1_RAT	Sh3bp1	SH3 domain-binding protein 1	1	FLALLAEEQDVNK	FLALLAEEQDVNK	3	FLALLAEEQDVNK3	2078.99	1103.14	
Q0D2L6	Q0D2L6	Q0D2L6_RAT	Rragc	Ras-related GTP-binding protein	1	FLALVCILR	FLALVC(UniMod:4)ILR	2	FLALVC(UniMod:4)ILR2	22245.3	16334.3	15163.4
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	FLAMGVLEGK	FLAMGVLEGK	2	FLAMGVLEGK2	15456.4	21066.5	18357.3
M0RCS2	M0RCS2	M0RCS2_RAT	Tbl2	Transducin (beta)-like 2	1	FLASCGDR	FLASC(UniMod:4)GDR	2	FLASC(UniMod:4)GDR2	25155	27693.7	25676
A0A8I6AE35	A0A8I6AE35	A0A8I6AE35_RAT	Ube2q2	Ubiquitin conjugating enzyme E2 Q2	1	FLASIFDK	FLASIFDK	2	FLASIFDK2	45671.9	24365.8	37419.7
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	FLASLTDTSEK	FLASLTDTSEK	2	FLASLTDTSEK2	4421.32	6689.55	5871.14
P01946	P01946	HBA_RAT	Hba1	Hemoglobin subunit alpha-1/2	1	FLASVSTVLTSK	FLASVSTVLTSK	2	FLASVSTVLTSK2	595673	473934	423929
E9PT66	E9PT66	E9PT66_RAT	Sf3b3	Splicing factor 3b, subunit 3	1	FLAVGLVDNTVR	FLAVGLVDNTVR	2	FLAVGLVDNTVR2	12958.4	12406.8	9943.96
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	FLAVIVEASGGGAFMVLPLNK	FLAVIVEASGGGAFMVLPLNK	3	FLAVIVEASGGGAFMVLPLNK3	10154	7247.28	15988.9
Q63433	Q63433	PKN1_RAT	Pkn1	Serine/threonine-protein kinase N1	1	FLAVLGR	FLAVLGR	2	FLAVLGR2	14106.4	15515.1	
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	FLCDSGR	FLC(UniMod:4)DSGR	2	FLC(UniMod:4)DSGR2	294169	295543	336937
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	FLCGVVEGFYGR	FLC(UniMod:4)GVVEGFYGR	2	FLC(UniMod:4)GVVEGFYGR2	7617.89		7345
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	FLCGVVEGFYGRPWVMEQR	FLC(UniMod:4)GVVEGFYGRPWVMEQR	3	FLC(UniMod:4)GVVEGFYGRPWVMEQR3	27191.1	18698.3	16585.3
B4F767	B4F767	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	1	FLCHSNALPSHVK	FLC(UniMod:4)HSNALPSHVK	3	FLC(UniMod:4)HSNALPSHVK3	13789.3	3815.57	15051.9
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	FLCSGGHNALFETFNWALSMGGK	FLC(UniMod:4)SGGHNALFETFNWALSMGGK	3	FLC(UniMod:4)SGGHNALFETFNWALSMGGK3	7092.12	876.139	
F7EUD8	Q9JMI9;F7EUD8	F7EUD8_RAT	Trpc6	Transient receptor ion channel domain-containing protein	0	FLDAAEYGNIPVVR	FLDAAEYGNIPVVR	2	FLDAAEYGNIPVVR2	57052.5	53396.8	50969.7
F7EUD8	Q9JMI9;F7EUD8	F7EUD8_RAT	Trpc6	Transient receptor ion channel domain-containing protein	0	FLDAAEYGNIPVVR	FLDAAEYGNIPVVR	3	FLDAAEYGNIPVVR3	15517.2	19069.4	26000.4
Q07977	Q07977	SIA8B_RAT	St8sia2	Alpha-2,8-sialyltransferase 8B	1	FLDAEKDISVLK	FLDAEKDISVLK	3	FLDAEKDISVLK3	13179.4	21836.5	27214.6
A1KQY6	A1KQY6	A1KQY6_RAT	St8sia4	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	1	FLDAERDVSVVK	FLDAERDVSVVK	3	FLDAERDVSVVK3	50562.9	68139.1	72110.2
Q6P7P5	Q6P7P5;A0A8I6GL15;A0A8I6AEA3	5MP2_RAT	Bzw1	eIF5-mimic protein 2	0	FLDASGAK	FLDASGAK	2	FLDASGAK2	490552	508790	482858
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	FLDATQYSAAGSSSVR	FLDATQYSAAGSSSVR	2	FLDATQYSAAGSSSVR2	15955	9183.96	9240.9
M0R3L8	M0R3L8	M0R3L8_RAT	Gba	Glucosylceramidase	1	FLDAYATHNIK	FLDAYATHNIK	2	FLDAYATHNIK2	7589.75	7816.44	5941.82
M0R3L8	M0R3L8	M0R3L8_RAT	Gba	Glucosylceramidase	1	FLDAYATHNIK	FLDAYATHNIK	3	FLDAYATHNIK3	47143.4	34997.2	38501.2
Q32KJ5	Q32KJ5	Q32KJ5_RAT	Gns	N-acetylglucosamine-6-sulfatase	1	FLDDAFR	FLDDAFR	2	FLDDAFR2	30339.9	28712.8	28093.9
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	FLDDIKK	FLDDIKK	2	FLDDIKK2	90630	92865.8	64969.6
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	FLDDSILQR	FLDDSILQR	2	FLDDSILQR2	11459.9	8874.5	20453.7
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	FLDEFLLNK	FLDEFLLNK	2	FLDEFLLNK2	65115	73621.8	77407
D3Z9I1	D3Z9I1	D3Z9I1_RAT	Coa3	Cytochrome c oxidase assembly factor 3	1	FLDELEDEAK	FLDELEDEAK	2	FLDELEDEAK2	20309.8	17874	19018.2
Q63344	Q63344	MOT2_RAT	Slc16a7	Monocarboxylate transporter 2	1	FLDFGLFTHR	FLDFGLFTHR	3	FLDFGLFTHR3	3402.84		
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	FLDFIGHILT	FLDFIGHILT	2	FLDFIGHILT2	15619.4	18262.6	21050.5
Q9Z0W7	Q9Z0W7	CLIC4_RAT	Clic4	Chloride intracellular channel protein 4	1	FLDGDEMTLADCNLLPK	FLDGDEMTLADC(UniMod:4)NLLPK	2	FLDGDEMTLADC(UniMod:4)NLLPK2	23641	23244.2	21789.9
Q9Z0W7	Q9Z0W7	CLIC4_RAT	Clic4	Chloride intracellular channel protein 4	1	FLDGDEMTLADCNLLPK	FLDGDEMTLADC(UniMod:4)NLLPK	3	FLDGDEMTLADC(UniMod:4)NLLPK3	21156	16693.3	23093.7
P17077	F1M7A9;A0A0G2JXD0;A0A8I6AHN0;P17077	RL9_RAT	Rpl9	Large ribosomal subunit protein uL6	0	FLDGIYVSEK	FLDGIYVSEK	2	FLDGIYVSEK2	19000.6	10268.3	10662.2
Q6MG61	Q6MG61	CLIC1_RAT	Clic1	Chloride intracellular channel protein 1	1	FLDGNELTLADCNLLPK	FLDGNELTLADC(UniMod:4)NLLPK	2	FLDGNELTLADC(UniMod:4)NLLPK2	90547.2	52774.5	51238.8
Q6MG61	Q6MG61	CLIC1_RAT	Clic1	Chloride intracellular channel protein 1	1	FLDGNELTLADCNLLPK	FLDGNELTLADC(UniMod:4)NLLPK	3	FLDGNELTLADC(UniMod:4)NLLPK3	13628.1	1562.29	5796.82
Q5U2N0	Q5U2N0	PYRG2_RAT	Ctps2	CTP synthase 2	1	FLDINLYK	FLDINLYK	2	FLDINLYK2	19938.8	33516.1	18962.1
Q62921	Q62921	HOIL1_RAT	Rbck1	RanBP-type and C3HC4-type zinc finger-containing protein 1	1	FLDLGVSIAENR	FLDLGVSIAENR	2	FLDLGVSIAENR2	5696.46		3190.75
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	FLDLLEPLGR	FLDLLEPLGR	2	FLDLLEPLGR2	119243	133657	102164
A0A0G2JUS5	A0A0G2JUS5	A0A0G2JUS5_RAT	Dolpp1	Dolichyldiphosphatase	1	FLDLLWR	FLDLLWR	2	FLDLLWR2	5317.53	6603.1	5860.56
P53987	P53987	MOT1_RAT	Slc16a1	Monocarboxylate transporter 1	1	FLDLSLFTHR	FLDLSLFTHR	2	FLDLSLFTHR2		2657.73	4471.81
P53987	P53987	MOT1_RAT	Slc16a1	Monocarboxylate transporter 1	1	FLDLSLFTHR	FLDLSLFTHR	3	FLDLSLFTHR3	19350.1	23571.1	19252.9
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	FLDLSLHDTVTTLILGGHNK	FLDLSLHDTVTTLILGGHNK	4	FLDLSLHDTVTTLILGGHNK4	5415.02	9401.53	2018.43
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	FLDPFEIDDHQQVHCPYDQLQIYANGK	FLDPFEIDDHQQVHC(UniMod:4)PYDQLQIYANGK	4	FLDPFEIDDHQQVHC(UniMod:4)PYDQLQIYANGK4	93719.4	64249.8	40476.9
D3ZN39	D3ZN39	D3ZN39_RAT	Usp8	ubiquitinyl hydrolase 1	1	FLDPITGTFR	FLDPITGTFR	2	FLDPITGTFR2	13246.8	7447.26	6088.15
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	FLDQNLQK	FLDQNLQK	2	FLDQNLQK2	47177.7	53055.1	41014.8
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	FLDSGPNK	FLDSGPNK	2	FLDSGPNK2	58681.8	52495.4	36080.3
B5DF48	B5DF48	B5DF48_RAT	Tyw1	tRNA 4-demethylwyosine synthase (AdoMet-dependent)	1	FLDSLQALSAK	FLDSLQALSAK	2	FLDSLQALSAK2		4977.77	11481.8
Q9WTT7	Q9WTT7	5MP1_RAT	Bzw2	eIF5-mimic protein 1	1	FLDSTGSR	FLDSTGSR	2	FLDSTGSR2	103789	123592	114399
D4ACD2	D4ACD2	D4ACD2_RAT	Bach1	BTB domain and CNC homolog 1	1	FLDSTSEQQGCAR	FLDSTSEQQGC(UniMod:4)AR	2	FLDSTSEQQGC(UniMod:4)AR2	4695.14	1776.85	1740.19
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	FLDTAFDLDAFK	FLDTAFDLDAFK	2	FLDTAFDLDAFK2	21227.1	22681.7	28117.3
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	FLDTAFDLDAFKK	FLDTAFDLDAFKK	2	FLDTAFDLDAFKK2	12141.3	8947.31	6880.02
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	FLDTAFDLDAFKK	FLDTAFDLDAFKK	3	FLDTAFDLDAFKK3	106482	99148.3	115137
A0A8I6A7S3	A0A8I6A7S3	A0A8I6A7S3_RAT	Atpaf2	ATP synthase mitochondrial F1 complex assembly factor 2	1	FLDTDTICYR	FLDTDTIC(UniMod:4)YR	2	FLDTDTIC(UniMod:4)YR2	8035.78	4010.12	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	FLDVLELAEK	FLDVLELAEK	2	FLDVLELAEK2	46296.6	35795.1	38161.5
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	FLDWTELK	FLDWTELK	2	FLDWTELK2	39401.2	36640.2	25069.9
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	FLDYLSDLCVSMNK	FLDYLSDLC(UniMod:4)VSMNK	2	FLDYLSDLC(UniMod:4)VSMNK2	15471.8	14781.3	17708.8
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	FLEADER	FLEADER	2	FLEADER2	25963.4	36136	24934.2
Q9Z1Y3	Q9Z1Y3	CADH2_RAT	Cdh2	Cadherin-2	1	FLEAGIYEVPIVITDSGNPPK	FLEAGIYEVPIVITDSGNPPK	3	FLEAGIYEVPIVITDSGNPPK3	7966.76	7153.76	6971.93
G3V6R4	G3V6R4	G3V6R4_RAT	Lrrc1	Leucine rich repeat containing 1	1	FLEDEKDEEENQTR	FLEDEKDEEENQTR	3	FLEDEKDEEENQTR3	10010.7	10039	
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	FLEDPSSVETVI	FLEDPSSVETVI	2	FLEDPSSVETVI2		4563.49	3563.96
A0A8I5ZTN5	A0A8I5ZTN5	A0A8I5ZTN5_RAT	Adsl	Adenylosuccinate lyase	1	FLEEEVYPLLKPYGSVMAVK	FLEEEVYPLLKPYGSVMAVK	3	FLEEEVYPLLKPYGSVMAVK3	86715.1	53030.1	71525.2
P00173	P00173	CYB5_RAT	Cyb5a	Cytochrome b5	1	FLEEHPGGEEVLR	FLEEHPGGEEVLR	2	FLEEHPGGEEVLR2	14283.3	4412.95	8988.39
P00173	P00173	CYB5_RAT	Cyb5a	Cytochrome b5	1	FLEEHPGGEEVLR	FLEEHPGGEEVLR	3	FLEEHPGGEEVLR3	212651	158099	168546
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	FLEEIMTK	FLEEIMTK	2	FLEEIMTK2	8705.99	13667.7	8480.17
Q9JHU5	Q9JHU5	ARFP1_RAT	Arfip1	Arfaptin-1	1	FLEENKVK	FLEENKVK	2	FLEENKVK2		5047.28	9379.76
Q91Y78	Q91Y78	UCHL3_RAT	Uchl3	Ubiquitin carboxyl-terminal hydrolase isozyme L3	1	FLEESVAMSPEER	FLEESVAMSPEER	2	FLEESVAMSPEER2	5152.65	3610.97	11597.1
F7FNG5	F7FNG5	F7FNG5_RAT	Cul4a	Cullin 4A	1	FLEETNCLYAAEGQR	FLEETNC(UniMod:4)LYAAEGQR	2	FLEETNC(UniMod:4)LYAAEGQR2	2178.86	4191.35	
P61805	P61805	DAD1_RAT	Dad1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1	1	FLEEYLSSTPQR	FLEEYLSSTPQR	2	FLEEYLSSTPQR2	154952	133295	146948
P61805	P61805	DAD1_RAT	Dad1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1	1	FLEEYLSSTPQR	FLEEYLSSTPQR	3	FLEEYLSSTPQR3	26690.4	23882.5	36988.5
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	FLEEYTSQLR	FLEEYTSQLR	2	FLEEYTSQLR2	34580.2	31651.8	29453.7
G3V619	G3V619	G3V619_RAT	Ascc1	Activating signal cointegrator 1 complex subunit 1	1	FLEFQAEVLKK	FLEFQAEVLKK	3	FLEFQAEVLKK3	3489.7	2718.45	1545.19
F1M784	F1M784	F1M784_RAT	Pik3ap1	Phosphoinositide-3-kinase adaptor protein 1	1	FLEGNSMK	FLEGNSMK	2	FLEGNSMK2	19044.8	35010.8	28351.3
Q66H63	Q66H63	GDAP2_RAT	Gdap2	Ganglioside-induced differentiation-associated-protein 2	1	FLEIHGETIEK	FLEIHGETIEK	3	FLEIHGETIEK3	27886.9	25830.2	27072.1
Q80Z30	Q80Z30	PPM1E_RAT	Ppm1e	Protein phosphatase 1E	1	FLELFLGEFR	FLELFLGEFR	2	FLELFLGEFR2	36001.7	27786.2	20596.4
Q9WTQ2	Q9WTQ2	PODXL_RAT	Podxl	Podocalyxin	1	FLELLCHSAK	FLELLC(UniMod:4)HSAK	2	FLELLC(UniMod:4)HSAK2	154757	108128	102776
Q9WTQ2	Q9WTQ2	PODXL_RAT	Podxl	Podocalyxin	1	FLELLCHSAK	FLELLC(UniMod:4)HSAK	3	FLELLC(UniMod:4)HSAK3	282135	295903	216070
P62944	P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	FLELLPK	FLELLPK	2	FLELLPK2	74762.8	53677.8	52806.9
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	FLELVQLK	FLELVQLK	2	FLELVQLK2	13021.5	13143.2	12924.7
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	FLEMCDDLLAR	FLEMC(UniMod:4)DDLLAR	2	FLEMC(UniMod:4)DDLLAR2	381352	387276	337659
P70483	P70483	STRN_RAT	Strn	Striatin	1	FLENAAADFSDEDEDEDIDGREK	FLENAAADFSDEDEDEDIDGREK	3	FLENAAADFSDEDEDEDIDGREK3	63627.1	63920.7	62471.5
D4A447	D4A447	D4A447_RAT	Cd109	CD109 molecule	1	FLENEFNR	FLENEFNR	2	FLENEFNR2	9251.29	5636.57	
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	FLENVAAAETEK	FLENVAAAETEK	2	FLENVAAAETEK2	322116	382371	394731
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	FLEPTLR	FLEPTLR	2	FLEPTLR2	100429	70088.1	130279
E9PSP1	E9PSP1	E9PSP1_RAT	Pltp	Phospholipid transfer protein	1	FLEQELEDINIPDVYGAK	FLEQELEDINIPDVYGAK	3	FLEQELEDINIPDVYGAK3	168451	173341	198355
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	FLEQLQELDAK	FLEQLQELDAK	2	FLEQLQELDAK2	28689.6	36106.8	35740.2
Q6P6Q2	A0A8I5ZR22;A0A0G2JVA8;Q6IFZ5;A0A0G2K4H7;A0A8I5ZMI8;Q10758;A0A0G2KA07;Q6IG00;A0A8J8Y3L8;A7M777;A0A0G2K0I4;Q6P6Q2;A7M746;Q6IG10;P47819;P31000;Q6IG12;A0A8I6G380;Q4FZU2;Q6IG05;A0A8I6AP90	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	0	FLEQQNK	FLEQQNK	1	FLEQQNK1	5694.33	5959.62	6192.12
Q6P6Q2	A0A8I5ZR22;A0A0G2JVA8;Q6IFZ5;A0A0G2K4H7;A0A8I5ZMI8;Q10758;A0A0G2KA07;Q6IG00;A0A8J8Y3L8;A7M777;A0A0G2K0I4;Q6P6Q2;A7M746;Q6IG10;P47819;P31000;Q6IG12;A0A8I6G380;Q4FZU2;Q6IG05;A0A8I6AP90	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	0	FLEQQNK	FLEQQNK	2	FLEQQNK2	1.05109e+06	962858	780946
D3ZXB7	Q6IG04;D3ZXB7	D3ZXB7_RAT	Krt71	Keratin 71	0	FLEQQNQVLETK	FLEQQNQVLETK	2	FLEQQNQVLETK2	22597.4	30721.1	13522
Q6IMF3	Q6IG01;Q6IMF3;Q6IG03	K2C1_RAT	Krt1	Keratin, type II cytoskeletal 1	0	FLEQQNQVLQTK	FLEQQNQVLQTK	2	FLEQQNQVLQTK2	2.67901e+06	2.54104e+06	2.36378e+06
Q6IMF3	Q6IG01;Q6IMF3;Q6IG03	K2C1_RAT	Krt1	Keratin, type II cytoskeletal 1	0	FLEQQNQVLQTK	FLEQQNQVLQTK	3	FLEQQNQVLQTK3	164434	120312	159954
P49803	P49803	RGS7_RAT	Rgs7	Regulator of G-protein signaling 7	1	FLESEFSSENLR	FLESEFSSENLR	2	FLESEFSSENLR2	13837.4	12051.4	18653.3
D4A1A5	A0A8I6A6K6;D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	0	FLESPDFQPNIAK	FLESPDFQPNIAK	2	FLESPDFQPNIAK2	50587.6	41371.6	47038.7
D3ZDI7	D3ZDI7	D3ZDI7_RAT	Ppp2r5a	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	FLESPDFQPSIAK	FLESPDFQPSIAK	2	FLESPDFQPSIAK2	16026.4	12547.9	13411.8
A0A0U1RRP3	A0A0U1RRP3	A0A0U1RRP3_RAT	Upf3b	UPF3B, regulator of nonsense mediated mRNA decay	1	FLESYATDNEK	FLESYATDNEK	2	FLESYATDNEK2	16726.4		10845.2
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	FLETGAENK	FLETGAENK	2	FLETGAENK2	29787.5	30265.9	40157.3
P70550	P70550	RAB8B_RAT	Rab8b	Ras-related protein Rab-8B	1	FLETSAK	FLETSAK	1	FLETSAK1	6509.2	4953.91	6793.62
P70550	P70550	RAB8B_RAT	Rab8b	Ras-related protein Rab-8B	1	FLETSAK	FLETSAK	2	FLETSAK2	788664	743074	840418
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	FLEVDEYPEHIK	FLEVDEYPEHIK	2	FLEVDEYPEHIK2	4221.83	3172.56	3321.77
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	FLEVDEYPEHIK	FLEVDEYPEHIK	3	FLEVDEYPEHIK3	54417.4	56322.1	65930.9
P61621	P61621	S61A1_RAT	Sec61a1	Protein transport protein Sec61 subunit alpha isoform 1	1	FLEVIKPFCVILPEIQKPER	FLEVIKPFC(UniMod:4)VILPEIQKPER	3	FLEVIKPFC(UniMod:4)VILPEIQKPER3	18210.7	32118.2	31941
P61621	P61621	S61A1_RAT	Sec61a1	Protein transport protein Sec61 subunit alpha isoform 1	1	FLEVIKPFCVILPEIQKPER	FLEVIKPFC(UniMod:4)VILPEIQKPER	4	FLEVIKPFC(UniMod:4)VILPEIQKPER4	27598.9	32202.9	37688.7
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	FLEVMQEK	FLEVMQEK	2	FLEVMQEK2	86700.3	73937.1	72635
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	FLFASVMADK	FLFASVMADK	2	FLFASVMADK2	30914.9	17039.9	21248.6
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	FLFASVMADKDTTR	FLFASVMADKDTTR	2	FLFASVMADKDTTR2	11917.8	3659.62	7598.08
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	FLFASVMADKDTTR	FLFASVMADKDTTR	3	FLFASVMADKDTTR3	227668	241689	253431
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	FLFASVMADKDTTRR	FLFASVMADKDTTRR	3	FLFASVMADKDTTRR3	44199.4	65719.9	55401.5
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	FLFASVMADKDTTRR	FLFASVMADKDTTRR	4	FLFASVMADKDTTRR4	26847.6	46845.4	68829.6
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	FLFDSVSSQNMGLR	FLFDSVSSQNMGLR	2	FLFDSVSSQNMGLR2	59591.2	93853	81384.5
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	FLFDSVSSQNMGLR	FLFDSVSSQNMGLR	3	FLFDSVSSQNMGLR3	11348.9	7389.24	8293.12
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	FLFEMSR	FLFEMSR	2	FLFEMSR2	249725	263189	296083
D3ZTN1	D3ZTN1	D3ZTN1_RAT	Tesc	Tescalcin	1	FLFHMYDSDSDGR	FLFHMYDSDSDGR	2	FLFHMYDSDSDGR2	11642.4	12692	9502.67
D3ZTN1	D3ZTN1	D3ZTN1_RAT	Tesc	Tescalcin	1	FLFHMYDSDSDGR	FLFHMYDSDSDGR	3	FLFHMYDSDSDGR3	75459.3	79042	73433.1
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	FLFLKADSHFR	FLFLKADSHFR	3	FLFLKADSHFR3	69700.8	46091.7	36723.6
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	FLFLKADSHFRHGIPFFVK	FLFLKADSHFRHGIPFFVK	4	FLFLKADSHFRHGIPFFVK4	43171	28986.8	43668.7
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	FLFNLPLNIK	FLFNLPLNIK	2	FLFNLPLNIK2	14905.3	23955.3	14651.7
P28037	A0A8I5ZRH3;P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	0	FLFPEGIK	FLFPEGIK	2	FLFPEGIK2	22689.6	22712.2	16156.7
F1MAM7	F1MAM7	F1MAM7_RAT	Igll1	Immunoglobulin lambda-like polypeptide 1	1	FLFQIIPR	FLFQIIPR	2	FLFQIIPR2	4015.69	6298.45	5248.43
Q32PX2	Q32PX2	AIMP2_RAT	Aimp2	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2	1	FLFSLFGQK	FLFSLFGQK	2	FLFSLFGQK2	39190	42539.9	53082.4
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	FLFTTGFHTK	FLFTTGFHTK	3	FLFTTGFHTK3	41593.2	38039.6	50092.5
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	FLFVDADQIVR	FLFVDADQIVR	2	FLFVDADQIVR2	143390	245408	303451
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	FLGCFSDLRK	FLGC(UniMod:4)FSDLRK	3	FLGC(UniMod:4)FSDLRK3	6335.56	12091.4	10307.3
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	FLGCVDIK	FLGC(UniMod:4)VDIK	2	FLGC(UniMod:4)VDIK2	38387.3	30661.2	28467.6
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	FLGDEQDQITFVTR	FLGDEQDQITFVTR	2	FLGDEQDQITFVTR2	1758	2334.42	1647.17
Q5XHY5	Q5XHY5	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	1	FLGDIEIWNQAEK	FLGDIEIWNQAEK	2	FLGDIEIWNQAEK2			5883.22
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	FLGDSAAGMAIK	FLGDSAAGMAIK	2	FLGDSAAGMAIK2	1.07609e+06	1.20045e+06	1.16579e+06
P47727	P47727	CBR1_RAT	Cbr1	Carbonyl reductase [NADPH] 1	1	FLGDVVLTAR	FLGDVVLTAR	2	FLGDVVLTAR2	14768.6	7745.44	21544.7
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	FLGDYVENLNK	FLGDYVENLNK	2	FLGDYVENLNK2	27461.2	24349.4	26992.1
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	FLGELYNYR	FLGELYNYR	2	FLGELYNYR2	25403	31467	22690.1
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	FLGHAQMFGNIK	FLGHAQMFGNIK	3	FLGHAQMFGNIK3	9945.82	6380.68	12585.5
A0A8I5ZSU2	A0A8I5ZSU2	A0A8I5ZSU2_RAT	Ccm2l	CCM2 like scaffold protein	1	FLGHLTWVTSSLNPSSR	FLGHLTWVTSSLNPSSR	3	FLGHLTWVTSSLNPSSR3	2253.47	2565.59	2499.71
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	FLGMHPCER	FLGMHPC(UniMod:4)ER	2	FLGMHPC(UniMod:4)ER2	28655.9	28114.5	21666.2
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	FLGMHPCER	FLGMHPC(UniMod:4)ER	3	FLGMHPC(UniMod:4)ER3	258899	311222	234758
P0C548	P0C548	PLPL2_RAT	Pnpla2	Patatin-like phospholipase domain-containing protein 2	1	FLGPLHPSFNLVK	FLGPLHPSFNLVK	3	FLGPLHPSFNLVK3	16411.4	20400.5	16821.5
D3ZWA8	D3ZWA8	D3ZWA8_RAT	Appl1	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1	1	FLGSMEVK	FLGSMEVK	2	FLGSMEVK2	16987.9	20073.9	13120.5
Q9JI03	Q9JI03	CO5A1_RAT	Col5a1	Collagen alpha-1(V) chain	1	FLGSNDEEMSYDNNPYIR	FLGSNDEEMSYDNNPYIR	3	FLGSNDEEMSYDNNPYIR3	6586.33	9939.69	4795.58
P20909	P20909	COBA1_RAT	Col11a1	Collagen alpha-1(XI) chain	1	FLGSNDEEMSYENNPHIK	FLGSNDEEMSYENNPHIK	3	FLGSNDEEMSYENNPHIK3	6849.59	6219.97	8104.27
Q5PQS4	Q5PQS4	GULP1_RAT	Gulp1	PTB domain-containing engulfment adapter protein 1	1	FLGSTEVEQPK	FLGSTEVEQPK	2	FLGSTEVEQPK2	16531.7	15052.8	20421.5
P15589	P15589	STS_RAT	Sts	Steryl-sulfatase	1	FLGTPTTNLR	FLGTPTTNLR	2	FLGTPTTNLR2	17021.1	17926.4	10763.6
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	FLGVEMEK	FLGVEMEK	2	FLGVEMEK2	95872.8	69547.5	71222.9
A0A8J8YGQ6	A0A8J8YGQ6	A0A8J8YGQ6_RAT	Dhrsx	Dehydrogenase/reductase X-linked	1	FLGWLLFK	FLGWLLFK	2	FLGWLLFK2	14699.5	8269	11966.3
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	FLGYTEK	FLGYTEK	2	FLGYTEK2	45657	55351.8	55239.1
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	FLGYTEKDIELLYPYK	FLGYTEKDIELLYPYK	3	FLGYTEKDIELLYPYK3	11086.6	22035.9	16853.2
Q8VIF7	Q8VIF7	SBP1_RAT	Selenbp1	Methanethiol oxidase	1	FLHDPDATQGFVGCALSSNIQR	FLHDPDATQGFVGC(UniMod:4)ALSSNIQR	3	FLHDPDATQGFVGC(UniMod:4)ALSSNIQR3	4410.34	3603.94	4326.7
A0A8I6A0D0	A0A8I6A0D0;Q498U1;A0A8I5ZW97	A0A8I6A0D0_RAT	Abcg3	ATP-binding cassette, subfamily G (WHITE), member 3	0	FLHEHTSGYYR	FLHEHTSGYYR	3	FLHEHTSGYYR3	8141.28	2498.81	5625.24
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	FLHEIQLNCAVNK	FLHEIQLNC(UniMod:4)AVNK	2	FLHEIQLNC(UniMod:4)AVNK2	2240.17	2371.21	
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	FLHFPYLLTLQLK	FLHFPYLLTLQLK	3	FLHFPYLLTLQLK3	24056.6	41049.9	18225.9
D3ZT64	D3ZT64	D3ZT64_RAT	Atg2a	Autophagy related 2A	1	FLHLHTSER	FLHLHTSER	3	FLHLHTSER3	8825.48	7218.15	6056.49
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	FLHLLNIR	FLHLLNIR	2	FLHLLNIR2	10095.1	13177.1	3215.85
M0R9J2	M0R9J2	M0R9J2_RAT	Pigg	GPI ethanolamine phosphate transferase 2	1	FLHLNTLQLSK	FLHLNTLQLSK	3	FLHLNTLQLSK3	10416.4		
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	FLHMLSNPVDLSNPAVISSTPK	FLHMLSNPVDLSNPAVISSTPK	3	FLHMLSNPVDLSNPAVISSTPK3	12352	17351.6	14801.4
B2GV38	B2GV38	UBL4A_RAT	Ubl4a	Ubiquitin-like protein 4A	1	FLHPEVTEAMEK	FLHPEVTEAMEK	2	FLHPEVTEAMEK2	33659.1	22954.9	27353
B2GV38	B2GV38	UBL4A_RAT	Ubl4a	Ubiquitin-like protein 4A	1	FLHPEVTEAMEK	FLHPEVTEAMEK	3	FLHPEVTEAMEK3	137795	116791	120273
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	FLHQDIDSAR	FLHQDIDSAR	2	FLHQDIDSAR2	18355.8	13522.8	16969.6
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	FLHQDIDSAR	FLHQDIDSAR	3	FLHQDIDSAR3	102337	126706	97326.4
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	FLHQMIR	FLHQMIR	2	FLHQMIR2	5353.18	7243.32	7150.08
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	FLHVPDTFEGHFQGVPVISK	FLHVPDTFEGHFQGVPVISK	3	FLHVPDTFEGHFQGVPVISK3	93185	124367	128949
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	FLHVPDTFEGHFQGVPVISK	FLHVPDTFEGHFQGVPVISK	4	FLHVPDTFEGHFQGVPVISK4	119670	174048	164387
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	FLHVPDTFEGHFQGVPVISKGQQK	FLHVPDTFEGHFQGVPVISKGQQK	3	FLHVPDTFEGHFQGVPVISKGQQK3	11626.5	17134.7	22098.6
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	FLHVPDTFEGHFQGVPVISKGQQK	FLHVPDTFEGHFQGVPVISKGQQK	4	FLHVPDTFEGHFQGVPVISKGQQK4	40616.9	75443.6	103731
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	FLICTDVAAR	FLIC(UniMod:4)TDVAAR	2	FLIC(UniMod:4)TDVAAR2	28858.7	19886	26407.4
Q4KM73	Q4KM73	KCY_RAT	Cmpk1	UMP-CMP kinase	1	FLIDGFPR	FLIDGFPR	2	FLIDGFPR2	99165.1	107553	113630
Q5XIB4	Q5XIB4	UFSP2_RAT	Ufsp2	Ufm1-specific protease 2	1	FLILDPHYTGAEDLQVILEK	FLILDPHYTGAEDLQVILEK	3	FLILDPHYTGAEDLQVILEK3	12678	14223.9	6619.95
D3ZL10	D3ZL10	D3ZL10_RAT	Col6a6	Collagen type VI alpha 6 chain	1	FLILITDGEAQDIVKDPAVALR	FLILITDGEAQDIVKDPAVALR	3	FLILITDGEAQDIVKDPAVALR3	3871.35	14408.4	6822.43
O08679	O08679	MARK2_RAT	Mark2	Serine/threonine-protein kinase MARK2	1	FLILNPSK	FLILNPSK	2	FLILNPSK2	10859.5	16665	4898.14
M0R907	M0R907	M0R907_RAT	Snrpd3	Small nuclear ribonucleoprotein Sm D3	1	FLILPDMLK	FLILPDMLK	2	FLILPDMLK2	6856.85	9745	16496.9
P63102	P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	1	FLIPNASQPESK	FLIPNASQPESK	2	FLIPNASQPESK2	1.99548e+07	1.94824e+07	2.05133e+07
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	FLISDQPHSIDPLLK	FLISDQPHSIDPLLK	3	FLISDQPHSIDPLLK3	70700.9	60981.6	52929.2
O88370	O88370	PI42C_RAT	Pip4k2c	Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma	1	FLISYDR	FLISYDR	2	FLISYDR2	46592.9	47604.9	40450.3
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	FLITGADQNR	FLITGADQNR	2	FLITGADQNR2	26875.4	30544.5	37374.5
Q6P9X4	A0A8I6B5G4;Q78EG7;Q6P9X4	TP4A2_RAT	Ptp4a2	Protein tyrosine phosphatase type IVA 2	0	FLITHNPTNATLNK	FLITHNPTNATLNK	3	FLITHNPTNATLNK3	25912.6	19778.1	13213.8
D3ZD62	D3ZD62	D3ZD62_RAT	Ndst2	[heparan sulfate]-glucosamine N-sulfotransferase	1	FLIVGPQK	FLIVGPQK	2	FLIVGPQK2	4866.72	7531.58	7225.14
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	FLIVPLGSHPVAK	FLIVPLGSHPVAK	2	FLIVPLGSHPVAK2	18647.2	22701.9	15376.7
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	FLIVPLGSHPVAK	FLIVPLGSHPVAK	3	FLIVPLGSHPVAK3	145361	140154	131800
Q6GQP4	Q6GQP4;B0BN19	RAB31_RAT	Rab31	Ras-related protein Rab-31	0	FLIWDTAGQER	FLIWDTAGQER	2	FLIWDTAGQER2	78834.5	76898.5	72780.2
A0A0G2JTX7	A0A0G2JTX7	A0A0G2JTX7_RAT	Col6a5	Collagen type VI alpha 5 chain	1	FLKPFVYSVR	FLKPFVYSVR	3	FLKPFVYSVR3	6669.9	4497.92	2402.61
Q496Z0	Q496Z0	ELP2_RAT	Elp2	Elongator complex protein 2	1	FLLAVSR	FLLAVSR	2	FLLAVSR2	9981.76	13152.4	7246.2
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	FLLDAVFAK	FLLDAVFAK	2	FLLDAVFAK2	53502.9	48054.9	45509.2
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	FLLDGGVR	FLLDGGVR	2	FLLDGGVR2	213845	185135	191261
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	FLLDHQGELFPSTDAQGV	FLLDHQGELFPSTDAQGV	3	FLLDHQGELFPSTDAQGV3	42912.3	50308.8	52706.1
D3ZFK6	D3ZFK6	D3ZFK6_RAT	Atg16l1	Autophagy related 16-like 1	1	FLLDNAR	FLLDNAR	2	FLLDNAR2	27718.4	15417.6	19194.2
A0A8I6AAR9	A0A0G2K916;A0A8I6AAR9	A0A8I6AAR9_RAT	Ankrd17	Ankyrin repeat domain 17	0	FLLEAGADQEHK	FLLEAGADQEHK	3	FLLEAGADQEHK3	5410.68	2924.01	4944.94
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	FLLENSVLK	FLLENSVLK	2	FLLENSVLK2	26801.4	23104.7	19315.5
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	FLLETVVR	FLLETVVR	2	FLLETVVR2	11674.8	7031.12	10322.9
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	FLLFCHISSHR	FLLFC(UniMod:4)HISSHR	3	FLLFC(UniMod:4)HISSHR3	64852.8	48694.9	54156.5
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	FLLFGLLGGK	FLLFGLLGGK	2	FLLFGLLGGK2	240336	269806	236826
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	FLLFGLLGGKR	FLLFGLLGGKR	2	FLLFGLLGGKR2		2304.16	
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	FLLFGLLGGKR	FLLFGLLGGKR	3	FLLFGLLGGKR3	6568.65	4969.49	7049.92
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	FLLFGLTGEK	FLLFGLTGEK	2	FLLFGLTGEK2	65558.1	76079.6	72360.9
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	FLLFGLTGEKR	FLLFGLTGEKR	3	FLLFGLTGEKR3	12349.4	21996.9	12382.8
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	FLLFGVR	FLLFGVR	2	FLLFGVR2	21278.5	26541	30104.9
P07867	P07867	LIPC_RAT	Lipc	Hepatic triacylglycerol lipase	1	FLLFKDESDR	FLLFKDESDR	3	FLLFKDESDR3	19102.6	19024.3	22476.2
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	FLLFSSLVNK	FLLFSSLVNK	2	FLLFSSLVNK2	11035	12627.8	9163.86
A0A0G2K2M3	A0A0G2K2M3	A0A0G2K2M3_RAT	Stat6	Signal transducer and activator of transcription	1	FLLGLQFLGTSAKPPLVR	FLLGLQFLGTSAKPPLVR	3	FLLGLQFLGTSAKPPLVR3	2184.39	6555.79	6551.79
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	FLLGNLAGFNPETASVPVK	FLLGNLAGFNPETASVPVK	3	FLLGNLAGFNPETASVPVK3	5205.82	8466.82	11726.2
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	FLLGVEGQHLLHR	FLLGVEGQHLLHR	4	FLLGVEGQHLLHR4	4434.32	6089.7	5376.69
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	FLLGYFPWDSTK	FLLGYFPWDSTK	2	FLLGYFPWDSTK2	47041.4	52332.5	69895.4
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	FLLGYFPWDSTKEER	FLLGYFPWDSTKEER	3	FLLGYFPWDSTKEER3	12416.6	31262.8	9408.28
B1H264	B1H264	B1H264_RAT	Tbc1d17	TBC1 domain family, member 17	1	FLLGYLSWESSAEEHK	FLLGYLSWESSAEEHK	3	FLLGYLSWESSAEEHK3	7511.71	8121.47	16212.5
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	FLLHEQQELWAQDLNK	FLLHEQQELWAQDLNK	3	FLLHEQQELWAQDLNK3	63738.7	71968.4	63484
Q07647	Q07647	GTR3_RAT	Slc2a3	Solute carrier family 2, facilitated glucose transporter member 3	1	FLLINRKEEDQATEILQR	FLLINRKEEDQATEILQR	3	FLLINRKEEDQATEILQR3	1492.99	6058.25	4321.85
Q07647	Q07647	GTR3_RAT	Slc2a3	Solute carrier family 2, facilitated glucose transporter member 3	1	FLLINRKEEDQATEILQR	FLLINRKEEDQATEILQR	4	FLLINRKEEDQATEILQR4	16652	22537.2	18148.8
Q9JHX4	Q9JHX4	CASP8_RAT	Casp8	Caspase-8	1	FLLITEIPK	FLLITEIPK	2	FLLITEIPK2	14087.5	11968.6	11805.4
A0A8I5ZT10	A0A8I5ZT10	A0A8I5ZT10_RAT	Ccm2	CCM2 scaffold protein	1	FLLLGLRPFIPEK	FLLLGLRPFIPEK	3	FLLLGLRPFIPEK3	12106.3	12633.7	12523.2
F1LTR1	F1LTR1	WDR26_RAT	Wdr26	WD repeat-containing protein 26	1	FLLLQQK	FLLLQQK	2	FLLLQQK2	19510.4	14609.7	28177.2
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	FLLLTFADLKK	FLLLTFADLKK	3	FLLLTFADLKK3	2465.39	5664.01	2340.1
D3ZD89	D3ZD89;M0RC73	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	0	FLLMLQSVK	FLLMLQSVK	2	FLLMLQSVK2	31037.8	27880.9	21737.6
P58751	P58751	RELN_RAT	Reln	Reelin	1	FLLMSGGK	FLLMSGGK	2	FLLMSGGK2	118505	134558	110124
P58751	P58751	RELN_RAT	Reln	Reelin	1	FLLMSGGKPSR	FLLMSGGKPSR	2	FLLMSGGKPSR2	29642.5	17917.1	16506.9
P58751	P58751	RELN_RAT	Reln	Reelin	1	FLLMSGGKPSR	FLLMSGGKPSR	3	FLLMSGGKPSR3	419631	432930	412982
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	FLLNLAIISK	FLLNLAIISK	2	FLLNLAIISK2	13170.6	14407.2	7542.57
A0A8I5Y697	A0A8I5Y697;D3ZGW2	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	0	FLLNNDK	FLLNNDK	2	FLLNNDK2	20048.9	32583.6	31453.3
E9PSP1	E9PSP1	E9PSP1_RAT	Pltp	Phospholipid transfer protein	1	FLLNQQICPVLHHAGTVLLNSLLDTVPVR	FLLNQQIC(UniMod:4)PVLHHAGTVLLNSLLDTVPVR	4	FLLNQQIC(UniMod:4)PVLHHAGTVLLNSLLDTVPVR4	30629.5	23097.3	21060
Q8K4Y7	Q8K4Y7	CANT1_RAT	Cant1	Soluble calcium-activated nucleotidase 1	1	FLLPETK	FLLPETK	2	FLLPETK2	13950.4	15363.1	12809.3
B1WBV4	B1WBV4	B1WBV4_RAT	Plekhf2	Pleckstrin homology and FYVE domain containing 2	1	FLLPSQSSK	FLLPSQSSK	2	FLLPSQSSK2	144740	116812	102864
B1WBV4	B1WBV4	B1WBV4_RAT	Plekhf2	Pleckstrin homology and FYVE domain containing 2	1	FLLPSQSSKPVR	FLLPSQSSKPVR	3	FLLPSQSSKPVR3	60884	71026.4	80095.4
Q5RK30	Q5RK30	SBDS_RAT	Sbds	Ribosome maturation protein SBDS	1	FLLPVNEGK	FLLPVNEGK	2	FLLPVNEGK2	12524.3	16495.8	20113.3
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	FLLQDTVELR	FLLQDTVELR	2	FLLQDTVELR2	61681.5	69477.5	44299.4
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	FLLQHQADVNAK	FLLQHQADVNAK	3	FLLQHQADVNAK3	3585.36	6411.32	10754.4
A0A0G2QC02	A0A0G2QC02	A0A0G2QC02_RAT	Skic2	Ski2 like RNA helicase	1	FLLSDQSLLLLPEYHQR	FLLSDQSLLLLPEYHQR	3	FLLSDQSLLLLPEYHQR3	7219.46	7726.98	
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	FLLTFQR	FLLTFQR	2	FLLTFQR2	241857	218558	215225
Q04400	Q04400	ADCY5_RAT	Adcy5	Adenylate cyclase type 5	1	FLLTFREPDLEK	FLLTFREPDLEK	3	FLLTFREPDLEK3	55537.7	32981.4	59012
Q04400	Q04400	ADCY5_RAT	Adcy5	Adenylate cyclase type 5	1	FLLTFREPDLEKK	FLLTFREPDLEKK	4	FLLTFREPDLEKK4	2997.99		3255.36
D3ZG58	D3ZG58	D3ZG58_RAT	Zwilch	Protein zwilch	1	FLLVLADGIR	FLLVLADGIR	2	FLLVLADGIR2	4691.51	4501.67	2867.38
Q5BK32	Q5BK32	FAF2_RAT	Faf2	FAS-associated factor 2	1	FLLVYLHGDDHQDSDEFCR	FLLVYLHGDDHQDSDEFC(UniMod:4)R	3	FLLVYLHGDDHQDSDEFC(UniMod:4)R3	5826.93	5676.5	7438.83
Q5BK32	Q5BK32	FAF2_RAT	Faf2	FAS-associated factor 2	1	FLLVYLHGDDHQDSDEFCR	FLLVYLHGDDHQDSDEFC(UniMod:4)R	4	FLLVYLHGDDHQDSDEFC(UniMod:4)R4	5427.93	5322.26	6266.9
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	FLLYGLLGK	FLLYGLLGK	2	FLLYGLLGK2	10861.3	25077.1	14392.1
P50399	P50398;P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	0	FLMANGQLVK	FLMANGQLVK	2	FLMANGQLVK2	50776.6	50647.2	42301
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	FLMSAER	FLMSAER	2	FLMSAER2	26814.9	18013.5	29451.8
D4AC36	D4AC36	D4AC36_RAT	Eif3f	Eukaryotic translation initiation factor 3 subunit F	1	FLMSLVNQVPK	FLMSLVNQVPK	2	FLMSLVNQVPK2	79950.9	87176.6	69080
P51646	P51646	ARL5A_RAT	Arl5a	ADP-ribosylation factor-like protein 5A	1	FLMWDIGGQESLR	FLMWDIGGQESLR	2	FLMWDIGGQESLR2	11280.8	5058.71	8142.82
A0A8I5ZTU5	A0A8I5ZTU5;A0A8I6ATA7	A0A8I5ZTU5_RAT	Ranbp1	RAN binding protein 1	0	FLNAENAQK	FLNAENAQK	2	FLNAENAQK2	99695.1	115440	97469.9
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	FLNAHDSLDR	FLNAHDSLDR	3	FLNAHDSLDR3	8252.29	9217.13	8729.92
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	FLNAVDPGR	FLNAVDPGR	2	FLNAVDPGR2	11731	12486.5	13174.2
A0A8I6AE91	A0A8I6GLY6;A0A8I6AE91;A0A0G2JV04	A0A8I6AE91_RAT	Gga2	Golgi associated, gamma adaptin ear containing, ARF binding protein 2	0	FLNELIK	FLNELIK	2	FLNELIK2	52483.2	49515.8	32933.7
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	FLNEQFQEPYTPELKPVEK	FLNEQFQEPYTPELKPVEK	3	FLNEQFQEPYTPELKPVEK3	15691.2	20115.6	11688.3
A0A0G2K1G4	A0A0G2K1G4	A0A0G2K1G4_RAT	Rspry1	Ring finger and SPRY domain containing 1	1	FLNHEGYGIGDDEYSCAYDGCR	FLNHEGYGIGDDEYSC(UniMod:4)AYDGC(UniMod:4)R	3	FLNHEGYGIGDDEYSC(UniMod:4)AYDGC(UniMod:4)R3	5969.85	4420.26	5437.94
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	FLNHFANYR	FLNHFANYR	2	FLNHFANYR2	3934.74	2834.89	4272.85
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	FLNHFANYR	FLNHFANYR	3	FLNHFANYR3	75654.1	63396.1	66431.8
A0A8I6ARV9	A0A8I6ARV9	A0A8I6ARV9_RAT	Ctsa	Carboxypeptidase	1	FLNKEPY	FLNKEPY	2	FLNKEPY2	47720.4	69517.6	48653.6
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	FLNLSSSHSMAVR	FLNLSSSHSMAVR	3	FLNLSSSHSMAVR3	15751.5	19830.1	13070.3
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	FLNLTENDIQK	FLNLTENDIQK	2	FLNLTENDIQK2	1.08081e+06	944101	1.05826e+06
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	FLNLTENDIQKFPK	FLNLTENDIQKFPK	2	FLNLTENDIQKFPK2	7537.38	10568.8	6194.46
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	FLNLTENDIQKFPK	FLNLTENDIQKFPK	3	FLNLTENDIQKFPK3	163271	268598	269692
D3ZTN1	D3ZTN1	D3ZTN1_RAT	Tesc	Tescalcin	1	FLNMETIALCH	FLNMETIALC(UniMod:4)H	2	FLNMETIALC(UniMod:4)H2	40571	27988.3	45363
A0A0G2JTB2	A0A0G2JTB2	A0A0G2JTB2_RAT	Gbe1	1,4-alpha-glucan branching enzyme	1	FLNNFDR	FLNNFDR	2	FLNNFDR2	7980.26		7971.35
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	FLNNQYVHK	FLNNQYVHK	3	FLNNQYVHK3	2422.6	3076.79	1817.87
P62142	D3ZJU8;P62142	PP1B_RAT	Ppp1cb	Serine/threonine-protein phosphatase PP1-beta catalytic subunit	0	FLNRHDLDLICR	FLNRHDLDLIC(UniMod:4)R	3	FLNRHDLDLIC(UniMod:4)R3	8260.27	13341.3	10518.6
P62142	D3ZJU8;P62142	PP1B_RAT	Ppp1cb	Serine/threonine-protein phosphatase PP1-beta catalytic subunit	0	FLNRHDLDLICR	FLNRHDLDLIC(UniMod:4)R	4	FLNRHDLDLIC(UniMod:4)R4	22724.5	24596.6	27099.4
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	FLNSEIHQVTK	FLNSEIHQVTK	3	FLNSEIHQVTK3	19472.6	24766.3	10993
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	FLNSFEELQAEECGILNGCENGR	FLNSFEELQAEEC(UniMod:4)GILNGC(UniMod:4)ENGR	3	FLNSFEELQAEEC(UniMod:4)GILNGC(UniMod:4)ENGR3	4969		8613.94
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	FLNSGGFIGFAPTIHR	FLNSGGFIGFAPTIHR	2	FLNSGGFIGFAPTIHR2		4217.74	1705.32
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	FLNSGGFIGFAPTIHR	FLNSGGFIGFAPTIHR	3	FLNSGGFIGFAPTIHR3	41793.3	31330.2	34317.2
F1LT49	F1LT49	F1LT49_RAT	Lrrc47	Leucine rich repeat containing 47	1	FLNSQTK	FLNSQTK	2	FLNSQTK2	44854.7	30771.1	33186
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	FLNSSSDHK	FLNSSSDHK	2	FLNSSSDHK2		11318.5	
P01026	P01026	CO3_RAT	C3	Complement C3	1	FLNTAKDR	FLNTAKDR	2	FLNTAKDR2	3776.76	6310.23	5601.1
Q4FZU0	Q4FZU0	Q4FZU0_RAT	Acp6	Acid phosphatase 6, lysophosphatidic	1	FLNTMSAYSVSPEK	FLNTMSAYSVSPEK	2	FLNTMSAYSVSPEK2	16002.6	6855.23	12225
P15473	P15473	IBP3_RAT	Igfbp3	Insulin-like growth factor-binding protein 3	1	FLNVLSPR	FLNVLSPR	2	FLNVLSPR2	241945	183010	182318
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	FLNVPMFR	FLNVPMFR	2	FLNVPMFR2	14388.7	13779.9	15202.9
D3ZR63	B1WBV3;D3ZR63	D3ZR63_RAT	Gfod1	Glucose-fructose oxidoreductase domain containing 1	0	FLPAFVR	FLPAFVR	2	FLPAFVR2	29823.9	22731.1	28411.6
A0A0G2JZP9	A0A8I6AJA6;A0A0G2JZP9	A0A0G2JZP9_RAT	Rnf11	Ring finger protein 11-like 1	0	FLPCMHIYHLDCIDDWLMR	FLPC(UniMod:4)MHIYHLDC(UniMod:4)IDDWLMR	3	FLPC(UniMod:4)MHIYHLDC(UniMod:4)IDDWLMR3	9792.22		7203.8
A0A0G2JZP9	A0A8I6AJA6;A0A0G2JZP9	A0A0G2JZP9_RAT	Rnf11	Ring finger protein 11-like 1	0	FLPCMHIYHLDCIDDWLMR	FLPC(UniMod:4)MHIYHLDC(UniMod:4)IDDWLMR	4	FLPC(UniMod:4)MHIYHLDC(UniMod:4)IDDWLMR4	16028.5	9820.13	15128
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	FLPFSFEHIR	FLPFSFEHIR	3	FLPFSFEHIR3	93850	98361.5	103875
Q63358	Q63358;Q9Z1N3	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	0	FLPIYNPK	FLPIYNPK	2	FLPIYNPK2	62299	58875.8	63438.6
P26772	A0A8I6A3Z7;P26772	CH10_RAT	Hspe1	10 kDa heat shock protein, mitochondrial	0	FLPLFDR	FLPLFDR	2	FLPLFDR2	1.38564e+06	1.35238e+06	1.3905e+06
Q8VHE9	Q8VHE9	RETST_RAT	Retsat	All-trans-retinol 13,14-reductase	1	FLPLPLTQLLNK	FLPLPLTQLLNK	2	FLPLPLTQLLNK2	7574.51	9782.68	6422.59
A0A8I6A0T5	A0A8I6A0T5	A0A8I6A0T5_RAT	Dctn5	Dynactin subunit 5	1	FLPLTQV	FLPLTQV	2	FLPLTQV2	3255.67	8144.7	
G3V7K5	G3V7K5	G3V7K5_RAT	Npc1	NPC intracellular cholesterol transporter 1	1	FLPMFLSDNPNPK	FLPMFLSDNPNPK	2	FLPMFLSDNPNPK2	9139.6	11960.5	13722.4
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	FLPNAPK	FLPNAPK	2	FLPNAPK2	38284.2	43985.3	43130.8
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	FLPSELR	FLPSELR	2	FLPSELR2	1.04674e+06	781046	895932
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	FLPSELRDEH	FLPSELRDEH	2	FLPSELRDEH2	570574	380856	370796
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	FLPSELRDEH	FLPSELRDEH	3	FLPSELRDEH3	5.08191e+06	5.18446e+06	4.89975e+06
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	FLPSLAQSALEK	FLPSLAQSALEK	2	FLPSLAQSALEK2	20343.1	21602.2	26822.1
Q7TPA5	Q7TPA5	SPA11_RAT	Serpina11	Serpin A11	1	FLPSLLDLHLPR	FLPSLLDLHLPR	3	FLPSLLDLHLPR3	11679.4	9901.79	8650.79
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	FLPSPVVIK	FLPSPVVIK	2	FLPSPVVIK2	36399.2	35732.6	25754.3
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	FLPSVFMDAMR	FLPSVFMDAMR	2	FLPSVFMDAMR2	14750.4	19449	13087.1
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	FLQAFQPGHLSQQVVMVK	FLQAFQPGHLSQQVVMVK	3	FLQAFQPGHLSQQVVMVK3	5637.56		5610.65
A0A8J8YPH6	A0A8J8YPH6	A0A8J8YPH6_RAT	Hps4	HPS4, biogenesis of lysosomal organelles complex 3 subunit 2	1	FLQAVNLMHSDFAQLPMLYEMTIR	FLQAVNLMHSDFAQLPMLYEMTIR	3	FLQAVNLMHSDFAQLPMLYEMTIR3	11099.7	7030.18	8174.25
P37727	P37727	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	1	FLQCLGR	FLQC(UniMod:4)LGR	2	FLQC(UniMod:4)LGR2	28993.5	38352.7	31079.1
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	FLQDCQELSLWINEK	FLQDC(UniMod:4)QELSLWINEK	2	FLQDC(UniMod:4)QELSLWINEK2	39820.2	36079.5	31904.9
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	FLQDCQELSLWINEK	FLQDC(UniMod:4)QELSLWINEK	3	FLQDC(UniMod:4)QELSLWINEK3	25565.5	17892.2	18308.8
G3V6L9	G3V6L9	G3V6L9_RAT	Fkbp3	peptidylprolyl isomerase	1	FLQDHGSDSFLAEHK	FLQDHGSDSFLAEHK	4	FLQDHGSDSFLAEHK4	396422		297706
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	FLQDHREFENWLER	FLQDHREFENWLER	4	FLQDHREFENWLER4	5106.01	6048.94	7467.86
B1H264	B1H264	B1H264_RAT	Tbc1d17	TBC1 domain family, member 17	1	FLQDPYSTTFSSFSR	FLQDPYSTTFSSFSR	2	FLQDPYSTTFSSFSR2	31426.9	31251.7	24250.3
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	FLQDTFGSDGLPR	FLQDTFGSDGLPR	2	FLQDTFGSDGLPR2	17493.4	20744.8	18595.5
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	FLQDTIEEMALK	FLQDTIEEMALK	2	FLQDTIEEMALK2	104181	105632	101871
O35346	O35346	FAK1_RAT	Ptk2	Focal adhesion kinase 1	1	FLQEALTMR	FLQEALTMR	2	FLQEALTMR2	13312.1	12452.7	10096.9
D4A0J7	D4A0J7	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	1	FLQEETVSQQINSIELLR	FLQEETVSQQINSIELLR	3	FLQEETVSQQINSIELLR3	3162.01	3023.02	5470.05
A0A0G2K543	A0A0G2K543	A0A0G2K543_RAT	C2cd5	C2 calcium-dependent domain containing 5	1	FLQEGTVEGCLEQR	FLQEGTVEGC(UniMod:4)LEQR	2	FLQEGTVEGC(UniMod:4)LEQR2	2614.21	4794.55	
A0A0G2K543	A0A0G2K543	A0A0G2K543_RAT	C2cd5	C2 calcium-dependent domain containing 5	1	FLQEGTVEGCLEQR	FLQEGTVEGC(UniMod:4)LEQR	3	FLQEGTVEGC(UniMod:4)LEQR3	1985.41		3436.61
D3ZXK7	D3ZXK7	RN123_RAT	Rnf123	E3 ubiquitin-protein ligase RNF123	1	FLQENASGR	FLQENASGR	2	FLQENASGR2	27115.1	19956.7	15832.5
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	FLQESFNNDR	FLQESFNNDR	2	FLQESFNNDR2	25996.2	17082.7	19805.5
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	FLQESNVLYQHNLR	FLQESNVLYQHNLR	2	FLQESNVLYQHNLR2	2886.53	2622.49	1919.88
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	FLQESNVLYQHNLR	FLQESNVLYQHNLR	3	FLQESNVLYQHNLR3	60471.9	81269.7	74861.1
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	FLQEVNSLTQKPSHPLAK	FLQEVNSLTQKPSHPLAK	3	FLQEVNSLTQKPSHPLAK3	4306.52		4359.87
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	FLQEVNSLTQKPSHPLAK	FLQEVNSLTQKPSHPLAK	4	FLQEVNSLTQKPSHPLAK4	10573.8	15083.4	8896.81
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	FLQEVSDEDEIMPPK	FLQEVSDEDEIMPPK	2	FLQEVSDEDEIMPPK2	22836.2	32383.8	26519.9
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	FLQEYFDGNLK	FLQEYFDGNLK	2	FLQEYFDGNLK2	196622	166693	211923
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	FLQEYFDGNLKR	FLQEYFDGNLKR	2	FLQEYFDGNLKR2	23068.1	19645	25773.4
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	FLQEYFDGNLKR	FLQEYFDGNLKR	3	FLQEYFDGNLKR3	101506	118895	123826
P58751	P58751	RELN_RAT	Reln	Reelin	1	FLQFTLR	FLQFTLR	2	FLQFTLR2	274382	353127	319928
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	FLQFVTGTSK	FLQFVTGTSK	2	FLQFVTGTSK2	50023.3	43071.9	35241.1
D4A0C3	D4A0C3	D4A0C3_RAT	Hid1	HID1 domain containing	1	FLQHGTLVGLLPVPHPILIR	FLQHGTLVGLLPVPHPILIR	4	FLQHGTLVGLLPVPHPILIR4	7893.55	5557.8	6880.23
Q5PPG7	Q5PPG7	EIF2D_RAT	Eif2d	Eukaryotic translation initiation factor 2D	1	FLQHMQQEQIVQVK	FLQHMQQEQIVQVK	3	FLQHMQQEQIVQVK3	3711.05	4744.2	1031.64
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	FLQLESLQELMK	FLQLESLQELMK	2	FLQLESLQELMK2	7591.97	23939.8	19518.1
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	FLQLFGTK	FLQLFGTK	2	FLQLFGTK2	55513.7	40180.7	38253.8
P29994	P29994;P29995;Q63269	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	0	FLQLLCENHNR	FLQLLC(UniMod:4)ENHNR	2	FLQLLC(UniMod:4)ENHNR2	2289.2	4826.2	1523.32
P29994	P29994;P29995;Q63269	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	0	FLQLLCENHNR	FLQLLC(UniMod:4)ENHNR	3	FLQLLC(UniMod:4)ENHNR3	45587	51806.6	32368.6
A0A8I6AU59	A0A8I6AU59	A0A8I6AU59_RAT	Hacd4	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase	1	FLQLTER	FLQLTER	2	FLQLTER2	12583.3	8251.49	6736.28
A0A8I5ZS17	A0A8I5ZS17	A0A8I5ZS17_RAT	Snx25	Sorting nexin 25	1	FLQNLLSDER	FLQNLLSDER	2	FLQNLLSDER2	7386.39	11110.1	6988.45
D3ZCT7	D3ZCT7	D3ZCT7_RAT	Sec23b	Protein transport protein SEC23	1	FLQPVHK	FLQPVHK	2	FLQPVHK2	3456.62	3750.15	1839.37
B5DFC3	B5DFC3	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	1	FLQPVQK	FLQPVQK	2	FLQPVQK2	31633.4	26163.6	20558.6
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	FLQQLGK	FLQQLGK	2	FLQQLGK2	114713	114202	122552
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	FLQSFSR	FLQSFSR	2	FLQSFSR2	419039	430504	475796
A0A096MK89	A0A096MK89	A0A096MK89_RAT	Adgrv1	Adhesion G protein-coupled receptor V1	1	FLQSVYVVPEDDHVLTIPVVR	FLQSVYVVPEDDHVLTIPVVR	3	FLQSVYVVPEDDHVLTIPVVR3	12684.3		11272.9
A0A8I5ZR58	A0A8I5ZR58	A0A8I5ZR58_RAT	Cux1-ps1	Protein CASP	1	FLQSYPGR	FLQSYPGR	2	FLQSYPGR2	20249.2	20523.9	21930.3
P29994	P29994;P29995	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	0	FLQTIVK	FLQTIVK	2	FLQTIVK2	110803	117164	115623
P57790	P57790	KEAP1_RAT	Keap1	Kelch-like ECH-associated protein 1	1	FLQTQLQK	FLQTQLQK	2	FLQTQLQK2	5433.37		
Q5XIP1	Q5XIP1	PELO_RAT	Pelo	Protein pelota homolog	1	FLQVHASSGHK	FLQVHASSGHK	2	FLQVHASSGHK2	1558.13	570.822	1636.28
Q5XIP1	Q5XIP1	PELO_RAT	Pelo	Protein pelota homolog	1	FLQVHASSGHK	FLQVHASSGHK	3	FLQVHASSGHK3	14453.3	22914.7	14593
F7FI79	F7FI79	F7FI79_RAT	Fhip2b	FHF complex subunit HOOK interacting protein 2B	1	FLQVLFDR	FLQVLFDR	2	FLQVLFDR2	9039.2	5430.14	10028.5
P58751	P58751	RELN_RAT	Reln	Reelin	1	FLQYWGR	FLQYWGR	2	FLQYWGR2	92730.9	78397.6	84121.5
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	FLREEIGTK	FLREEIGTK	2	FLREEIGTK2	9538.82	13621.9	9649.07
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	FLRENPYYDSR	FLRENPYYDSR	3	FLRENPYYDSR3		5065.88	5518.4
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	FLRPHYGK	FLRPHYGK	2	FLRPHYGK2	4710.32	10144.9	10073.1
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	FLSAEEYQQK	FLSAEEYQQK	2	FLSAEEYQQK2	40756.4	55592.8	48652.6
D4A533	D4A533	D4A533_RAT	Tapt1	Transmembrane anterior posterior transformation 1	1	FLSAELTR	FLSAELTR	2	FLSAELTR2	483799	507828	
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	FLSAIVSSVDK	FLSAIVSSVDK	2	FLSAIVSSVDK2	49784.2	43159.2	32782.4
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	FLSAIVSSVDKIPYGMR	FLSAIVSSVDKIPYGMR	3	FLSAIVSSVDKIPYGMR3	33262.2	37612.2	41726
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	FLSCALIDPTHEGTAEGMENMADAVTHAR	FLSC(UniMod:4)ALIDPTHEGTAEGMENMADAVTHAR	4	FLSC(UniMod:4)ALIDPTHEGTAEGMENMADAVTHAR4	29510.3	20635.8	18258.2
D3ZK09	D3ZK09	D3ZK09_RAT	Scyl3	SCY1 like pseudokinase 3	1	FLSCTVEADGIHLVTER	FLSC(UniMod:4)TVEADGIHLVTER	3	FLSC(UniMod:4)TVEADGIHLVTER3	16268.1	27820.6	21059.8
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	FLSDPQVHTVLVER	FLSDPQVHTVLVER	2	FLSDPQVHTVLVER2	12681.3	13104.5	5469.62
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	FLSDPQVHTVLVER	FLSDPQVHTVLVER	3	FLSDPQVHTVLVER3	678260	834754	767462
P14882	P14882	PCCA_RAT	Pcca	Propionyl-CoA carboxylase alpha chain, mitochondrial	1	FLSDVYPDGFK	FLSDVYPDGFK	2	FLSDVYPDGFK2	4182.49		4921.66
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	FLSDYDELTGWMEEK	FLSDYDELTGWMEEK	2	FLSDYDELTGWMEEK2	4099.73	4889.18	4291.58
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	FLSEMLK	FLSEMLK	2	FLSEMLK2	51378.1	28320.7	33496.9
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	FLSENLMWHVTSQIVELK	FLSENLMWHVTSQIVELK	3	FLSENLMWHVTSQIVELK3		3384.77	714.532
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	FLSESLMWHISSQVAELK	FLSESLMWHISSQVAELK	3	FLSESLMWHISSQVAELK3	38698.1	40730.9	35010.7
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	FLSESLMWHISSQVAELKK	FLSESLMWHISSQVAELKK	3	FLSESLMWHISSQVAELKK3	25116.5	21278.1	26864.7
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	FLSESLMWHISSQVAELKK	FLSESLMWHISSQVAELKK	4	FLSESLMWHISSQVAELKK4	53734.1	36030.7	54123.1
P01946	P01946	HBA_RAT	Hba1	Hemoglobin subunit alpha-1/2	1	FLSHCLLVTLACHHPGDFTPAMHASLDK	FLSHC(UniMod:4)LLVTLAC(UniMod:4)HHPGDFTPAMHASLDK	4	FLSHC(UniMod:4)LLVTLAC(UniMod:4)HHPGDFTPAMHASLDK4	62440	49453.1	51049.5
P14604	P14604	ECHM_RAT	Echs1	Enoyl-CoA hydratase, mitochondrial	1	FLSHWDHITR	FLSHWDHITR	3	FLSHWDHITR3	55197.9	43481.3	47513.6
P55260	P55260	ANXA4_RAT	Anxa4	Annexin A4	1	FLSILCSR	FLSILC(UniMod:4)SR	2	FLSILC(UniMod:4)SR2	12486.3	9339.27	10641.2
D3ZIS7	D3ZIS7	D3ZIS7_RAT	C18h5orf46	Similar to AVLV472	1	FLSILGSEIIENAVDFILR	FLSILGSEIIENAVDFILR	3	FLSILGSEIIENAVDFILR3	4784.35		
Q5M853	Q5M853	KXDL1_RAT	Kxd1	KxDL motif-containing protein 1	1	FLSMVNTDDVNAIILAQK	FLSMVNTDDVNAIILAQK	3	FLSMVNTDDVNAIILAQK3			5893.94
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	FLSNGHVTIPGQQDK	FLSNGHVTIPGQQDK	2	FLSNGHVTIPGQQDK2	284504	247800	236508
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	FLSNGHVTIPGQQDK	FLSNGHVTIPGQQDK	3	FLSNGHVTIPGQQDK3	4.58929e+06	4.83091e+06	4.76994e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	FLSNGHVTIPGQQDKDMFQETMEAMR	FLSNGHVTIPGQQDKDMFQETMEAMR	4	FLSNGHVTIPGQQDKDMFQETMEAMR4	3.4577e+06	4.23015e+06	3.60954e+06
D3ZQV2	D3ZQV2	D3ZQV2_RAT	Lrig2	Leucine-rich repeats and immunoglobulin-like domains 2	1	FLSNLQTLDLR	FLSNLQTLDLR	2	FLSNLQTLDLR2		1325.42	
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	FLSNSWYIPK	FLSNSWYIPK	2	FLSNSWYIPK2	98146.5	104353	101548
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	FLSNSWYIPKEDK	FLSNSWYIPKEDK	3	FLSNSWYIPKEDK3	9495.79	16707.7	22681.5
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	FLSPGEAGAVGTVGR	FLSPGEAGAVGTVGR	2	FLSPGEAGAVGTVGR2	184655	193087	226445
D4ABB3	D4ABB3	D4ABB3_RAT	Adamts17	ADAM metallopeptidase with thrombospondin type 1 motif, 17	1	FLSPGFEVEEAGVSGR	FLSPGFEVEEAGVSGR	2	FLSPGFEVEEAGVSGR2		5166.88	13373.1
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	FLSPLQQNLLK	FLSPLQQNLLK	2	FLSPLQQNLLK2	52128.4	46241.1	66702.2
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	FLSPVVPNYDNVHPNYHK	FLSPVVPNYDNVHPNYHK	3	FLSPVVPNYDNVHPNYHK3	52621.8	52652	25482.1
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	FLSPVVPNYDNVHPNYHK	FLSPVVPNYDNVHPNYHK	4	FLSPVVPNYDNVHPNYHK4	215928	178476	184699
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	FLSPVVPNYDNVHPNYHKEPFLQQLK	FLSPVVPNYDNVHPNYHKEPFLQQLK	4	FLSPVVPNYDNVHPNYHKEPFLQQLK4	14474.2	14724.9	6629.17
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	FLSQESGVAQTLK	FLSQESGVAQTLK	2	FLSQESGVAQTLK2	43883.5	47005.7	37252.3
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	FLSQESGVAQTLKK	FLSQESGVAQTLKK	3	FLSQESGVAQTLKK3	11947.6	17911.2	16510.6
P05708	M0R3X7;P05708	HXK1_RAT	Hk1	Hexokinase-1	0	FLSQIESDR	FLSQIESDR	2	FLSQIESDR2	434884	416755	448637
P05708	M0R3X7;P05708	HXK1_RAT	Hk1	Hexokinase-1	0	FLSQIESDRLALLQVR	FLSQIESDRLALLQVR	3	FLSQIESDRLALLQVR3	14460.7	23820.5	18964.6
A0A8I6GEV9	A0A8I6GEV9	A0A8I6GEV9_RAT	Abce1	ATP binding cassette subfamily E member 1	1	FLSQLEITFR	FLSQLEITFR	2	FLSQLEITFR2	6758.33	7830.9	
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	FLSQLLER	FLSQLLER	2	FLSQLLER2	391523	293062	274156
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	FLSQPFQVAEVFTGHMGK	FLSQPFQVAEVFTGHMGK	3	FLSQPFQVAEVFTGHMGK3	240396	300505	272382
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	FLSRPALPFILR	FLSRPALPFILR	3	FLSRPALPFILR3	11174.9	5516.31	12148.1
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	FLSSAAAVSK	FLSSAAAVSK	2	FLSSAAAVSK2	73671.6	63581.4	59122.2
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	FLSSPHYTTLTEAR	FLSSPHYTTLTEAR	3	FLSSPHYTTLTEAR3	58492.9	67048.5	72792.6
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	FLSSSSFVTDALQYK	FLSSSSFVTDALQYK	2	FLSSSSFVTDALQYK2	350470	458311	388536
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	FLSSSSFVTDALQYK	FLSSSSFVTDALQYK	3	FLSSSSFVTDALQYK3	28090.7	50673	42320.7
D3ZXK7	D3ZXK7	RN123_RAT	Rnf123	E3 ubiquitin-protein ligase RNF123	1	FLSTAAVSLMTPR	FLSTAAVSLMTPR	2	FLSTAAVSLMTPR2	8550.95	3033.8	6312.32
O08874	O08874	PKN2_RAT	Pkn2	Serine/threonine-protein kinase N2	1	FLSTEAISIMR	FLSTEAISIMR	2	FLSTEAISIMR2		12277.1	6876.24
D3ZEJ9	D3ZEJ9	D3ZEJ9_RAT	RGD1310429	Similar to Protein Njmu-R1	1	FLSVASLQGLIHEGTMTSLCMAMTEEQHK	FLSVASLQGLIHEGTMTSLC(UniMod:4)MAMTEEQHK	4	FLSVASLQGLIHEGTMTSLC(UniMod:4)MAMTEEQHK4		7270.15	
F1LPV0	F1LPV0	F1LPV0_RAT	Nars1	asparagine--tRNA ligase	1	FLSWILNR	FLSWILNR	2	FLSWILNR2	49720.6	58162.6	46760.5
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	FLTAGEDGK	FLTAGEDGK	2	FLTAGEDGK2	2168.19	3318.16	2364.84
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	FLTALAQDGVINEEALSVTELDR	FLTALAQDGVINEEALSVTELDR	3	FLTALAQDGVINEEALSVTELDR3	40653.4	29868.2	24649.9
P24473	P24473	GSTK1_RAT	Gstk1	Glutathione S-transferase kappa 1	1	FLTAVSMEQPEMLEK	FLTAVSMEQPEMLEK	2	FLTAVSMEQPEMLEK2	52571.8	47575.7	46722.3
P24473	P24473	GSTK1_RAT	Gstk1	Glutathione S-transferase kappa 1	1	FLTAVSMEQPEMLEK	FLTAVSMEQPEMLEK	3	FLTAVSMEQPEMLEK3	8629.01	1977.56	4609.93
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	FLTCDDYEK	FLTC(UniMod:4)DDYEK	2	FLTC(UniMod:4)DDYEK2	17114.2	9750.03	17663.2
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	FLTCDEHR	FLTC(UniMod:4)DEHR	2	FLTC(UniMod:4)DEHR2	18192.9	20094.7	15324.5
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	FLTCGHDR	FLTC(UniMod:4)GHDR	2	FLTC(UniMod:4)GHDR2	6766.56	8344.24	8313.77
P80254	P80254	DOPD_RAT	Ddt	D-dopachrome decarboxylase	1	FLTEELSLDQDR	FLTEELSLDQDR	3	FLTEELSLDQDR3	1689.08		
Q9QZK5	Q9QZK5	HTRA1_RAT	Htra1	Serine protease HTRA1	1	FLTESHDR	FLTESHDR	2	FLTESHDR2			9004.43
O35217	O35217	MINP1_RAT	Minpp1	Multiple inositol polyphosphate phosphatase 1	1	FLTEVER	FLTEVER	2	FLTEVER2	97643	61630.9	71163.8
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	FLTEVGNSHIMK	FLTEVGNSHIMK	3	FLTEVGNSHIMK3	6895.92	5520.61	5893.37
P37727	P37727	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	1	FLTFCVEYEEHPDEYR	FLTFC(UniMod:4)VEYEEHPDEYR	3	FLTFC(UniMod:4)VEYEEHPDEYR3	3706.91	7860.16	4099.23
Q68FW7	Q68FW7	SYTM_RAT	Tars2	Threonine--tRNA ligase, mitochondrial	1	FLTFDSPEGK	FLTFDSPEGK	2	FLTFDSPEGK2	4484.8	4710.28	10933.8
Q71RP1	Q71RP1	HPSE_RAT	Hpse	Heparanase	1	FLTFLGSPR	FLTFLGSPR	2	FLTFLGSPR2	234563	212046	215363
A0A140UHX9	A0A140UHX9	A0A140UHX9_RAT	Ccz1	CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated	1	FLTGPLNLNDPEAK	FLTGPLNLNDPEAK	2	FLTGPLNLNDPEAK2	12833.8	17984	11945.6
A0A0G2K162	Q9JMB3;A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	0	FLTLGSK	FLTLGSK	2	FLTLGSK2	50723.8	48078.7	43900.8
D3ZPA1	D3ZPA1	D3ZPA1_RAT	Gcc1	GRIP and coiled-coil domain containing 1	1	FLTLPDSLGR	FLTLPDSLGR	2	FLTLPDSLGR2	10192.2		11196.2
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	FLTLPPVLHLQLMR	FLTLPPVLHLQLMR	2	FLTLPPVLHLQLMR2	12164.4	17098.3	8963.47
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	FLTLPPVLHLQLMR	FLTLPPVLHLQLMR	3	FLTLPPVLHLQLMR3	20386	16308.4	25756
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	FLTMCNR	FLTMC(UniMod:4)NR	2	FLTMC(UniMod:4)NR2	58993.4	58358.4	58400.5
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	FLTMLTAIATQGAISR	FLTMLTAIATQGAISR	2	FLTMLTAIATQGAISR2	31962.5	36393.4	37466
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	FLTMLTAIATQGAISR	FLTMLTAIATQGAISR	3	FLTMLTAIATQGAISR3	55441.8	55320.8	52711.4
D3ZSZ4	D3ZSZ4	D3ZSZ4_RAT	Pgbd5	PiggyBac transposable element derived 5	1	FLTNAYSPVQQGVIIK	FLTNAYSPVQQGVIIK	2	FLTNAYSPVQQGVIIK2	2710.46	3342.96	1437.86
Q5GAM5	Q5GAM5	Q5GAM5_RAT	Ang2	Angiogenin ribonuclease 2	1	FLTQHYDAKPK	FLTQHYDAKPK	3	FLTQHYDAKPK3	16018.5	15069.8	11745.5
D4A6K4	D4A6K4	D4A6K4_RAT	Golga1	Golgin A1	1	FLTSQLQEVK	FLTSQLQEVK	2	FLTSQLQEVK2	19244.9	19435.4	10965.4
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	FLTSQQLFK	FLTSQQLFK	2	FLTSQQLFK2	43611.1	72960.1	38786.1
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	FLTTTPNSLLVSWQAPR	FLTTTPNSLLVSWQAPR	2	FLTTTPNSLLVSWQAPR2	48796.1	46893.8	46782.4
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	FLTTTPNSLLVSWQAPR	FLTTTPNSLLVSWQAPR	3	FLTTTPNSLLVSWQAPR3	124117	98195.7	124763
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	FLTTTPNSLLVSWQAPR	FLTTTPNSLLVSWQAPR	4	FLTTTPNSLLVSWQAPR4	32024.6	47331.4	55968
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	FLTTTPNSLLVSWQAPRAR	FLTTTPNSLLVSWQAPRAR	3	FLTTTPNSLLVSWQAPRAR3	41788.1	34769.7	55708.3
P62246	A0A0G2K6I0;P62246;M0R8U6;D3ZZC7	RS15A_RAT	Rps15a	Small ribosomal subunit protein uS8	0	FLTVMMK	FLTVMMK	2	FLTVMMK2	23711.4	19406.4	
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	FLVALISR	FLVALISR	2	FLVALISR2	52150.4	60637.6	28212.7
Q9EPI1	Q9EPI1	XYLT1_RAT	Xylt1	Xylosyltransferase 1 (Fragment)	1	FLVAPLTFSNK	FLVAPLTFSNK	2	FLVAPLTFSNK2	18605	31446.4	26541
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	FLVECFR	FLVEC(UniMod:4)FR	2	FLVEC(UniMod:4)FR2	118659	129521	95636.2
Q63321	Q63321	PLOD1_RAT	Plod1	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1	1	FLVEYIAPLTEK	FLVEYIAPLTEK	2	FLVEYIAPLTEK2	1544.81	3641.01	
Q63060	Q63060	GLPK_RAT	Gk	Glycerol kinase	1	FLVFNSK	FLVFNSK	1	FLVFNSK1	1816.26		
Q63060	Q63060	GLPK_RAT	Gk	Glycerol kinase	1	FLVFNSK	FLVFNSK	2	FLVFNSK2	64193.3	55983.9	60593.4
P50398	P50398	GDIA_RAT	Gdi1	Rab GDP dissociation inhibitor alpha	1	FLVFVANFDENDPK	FLVFVANFDENDPK	2	FLVFVANFDENDPK2	33184.9	31352	35990.5
Q7TPJ0	Q7TPJ0	SSRA_RAT	Ssr1	Translocon-associated protein subunit alpha	1	FLVGFTNK	FLVGFTNK	2	FLVGFTNK2	470282	460511	430437
P23764	P23764	GPX3_RAT	Gpx3	Glutathione peroxidase 3	1	FLVGPDGIPIMR	FLVGPDGIPIMR	2	FLVGPDGIPIMR2	155843	152239	163746
P23764	P23764	GPX3_RAT	Gpx3	Glutathione peroxidase 3	1	FLVGPDGIPIMR	FLVGPDGIPIMR	3	FLVGPDGIPIMR3	323809	346449	353945
P04041	P04041	GPX1_RAT	Gpx1	Glutathione peroxidase 1	1	FLVGPDGVPVR	FLVGPDGVPVR	2	FLVGPDGVPVR2	47445.9	59112.1	45017.2
P04041	P04041	GPX1_RAT	Gpx1	Glutathione peroxidase 1	1	FLVGPDGVPVRR	FLVGPDGVPVRR	3	FLVGPDGVPVRR3	286822	249020	269428
Q5PPK9	Q5PPK9	EIPR1_RAT	Eipr1	EARP and GARP complex-interacting protein 1	1	FLVGTQSLK	FLVGTQSLK	2	FLVGTQSLK2	77643.3	79069.1	71191.3
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	FLVHDAFWALPK	FLVHDAFWALPK	2	FLVHDAFWALPK2	11864.8	14831.5	11542.4
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	FLVHDAFWALPK	FLVHDAFWALPK	3	FLVHDAFWALPK3	44745.8	57354.2	54043
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	FLVHSQQPCPQGAPDCQR	FLVHSQQPC(UniMod:4)PQGAPDC(UniMod:4)QR	3	FLVHSQQPC(UniMod:4)PQGAPDC(UniMod:4)QR3	99959.7	108665	80413.4
F1LP90	A0A0G2K490;A0A8I5ZLV4;F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	0	FLVIALK	FLVIALK	2	FLVIALK2	144815	135818	150247
Q62865	Q62865;Q63085	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	0	FLVIEAILATDLKK	FLVIEAILATDLKK	2	FLVIEAILATDLKK2	7993.34	3527.4	7548.02
Q62865	Q62865;Q63085	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	0	FLVIEAILATDLKK	FLVIEAILATDLKK	3	FLVIEAILATDLKK3	122553	88008	82125.1
P05714	P05714	RAB4A_RAT	Rab4a	Ras-related protein Rab-4A	1	FLVIGNAGTGK	FLVIGNAGTGK	2	FLVIGNAGTGK2	9377.64		25265.9
P51146	P51146	RAB4B_RAT	Rab4b	Ras-related protein Rab-4B	1	FLVIGSAGTGK	FLVIGSAGTGK	2	FLVIGSAGTGK2	88189.4	81947.8	65202.3
O88483	O88483	PDP1_RAT	Pdp1	[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial	1	FLVLATDGLWETMHR	FLVLATDGLWETMHR	3	FLVLATDGLWETMHR3		5676.24	
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	FLVLDEADGLLSQGYSDFINR	FLVLDEADGLLSQGYSDFINR	3	FLVLDEADGLLSQGYSDFINR3	3676.06	2403.92	812.435
Q8VHF0	Q8VHF0	MARK3_RAT	Mark3	MAP/microtubule affinity-regulating kinase 3	1	FLVLNPVK	FLVLNPVK	2	FLVLNPVK2	7756.07	4875.65	8774.68
Q63530	Q63530	PTER_RAT	Pter	Phosphotriesterase-related protein	1	FLVNEGYEDR	FLVNEGYEDR	2	FLVNEGYEDR2	6321.1	10799.8	4698.19
P36953	P36953	AFAM_RAT	Afm	Afamin	1	FLVNLVK	FLVNLVK	2	FLVNLVK2	781804	774056	650964
Q6XVN8	Q6XVN8	MLP3A_RAT	Map1lc3a	Microtubule-associated proteins 1A/1B light chain 3A	1	FLVPDHVNMSELVK	FLVPDHVNMSELVK	3	FLVPDHVNMSELVK3	32321.2	17914	21918.8
Q80WF4	Q80WF4	T132A_RAT	Tmem132a	Transmembrane protein 132A	1	FLVPFAAHPLDGGR	FLVPFAAHPLDGGR	3	FLVPFAAHPLDGGR3	6163.89	3868.3	6145.15
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	FLVQAEGVQQSEATAMFK	FLVQAEGVQQSEATAMFK	3	FLVQAEGVQQSEATAMFK3	152272	172995	157372
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	FLVSTSQDGR	FLVSTSQDGR	2	FLVSTSQDGR2	336543	327883	379559
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	FLVTLAQK	FLVTLAQK	2	FLVTLAQK2	28044.2	36440.7	27180.5
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	FLVTVIK	FLVTVIK	2	FLVTVIK2	20677.1	14202.7	15883.1
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	FLVVTQK	FLVVTQK	2	FLVVTQK2	34217.6	60161.8	49754.7
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	FLVYVANFDEKDPR	FLVYVANFDEKDPR	2	FLVYVANFDEKDPR2	3408.96	5935.69	6794.59
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	FLVYVANFDEKDPR	FLVYVANFDEKDPR	3	FLVYVANFDEKDPR3	22283.9	23292.9	19667.9
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	FLWESYR	FLWESYR	2	FLWESYR2	88362.7	100121	79561.9
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	FLWNNLLSVVR	FLWNNLLSVVR	2	FLWNNLLSVVR2	6717.18	3947.22	5563.03
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	FLWPGFGENAR	FLWPGFGENAR	2	FLWPGFGENAR2	412529	314300	330935
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	FLYDVQLPIVAK	FLYDVQLPIVAK	2	FLYDVQLPIVAK2	18300.9	14677.3	19253.8
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	FLYGCQAPTICFVYQDPQGR	FLYGC(UniMod:4)QAPTIC(UniMod:4)FVYQDPQGR	3	FLYGC(UniMod:4)QAPTIC(UniMod:4)FVYQDPQGR3	29921.7	35396	46255.4
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	FLYLGDDR	FLYLGDDR	2	FLYLGDDR2	66404.6	55354.7	74783.1
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	FLYLGDDRNIEEVYVGGK	FLYLGDDRNIEEVYVGGK	3	FLYLGDDRNIEEVYVGGK3	2686.54		
P55280	P55280	CADH6_RAT	Cdh6	Cadherin-6	1	FLYLGPFK	FLYLGPFK	2	FLYLGPFK2	43261.1	41418.3	38751.2
Q5XIT9	Q5XIT9	MCCB_RAT	Mccc2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	1	FLYMWPNAR	FLYMWPNAR	2	FLYMWPNAR2	34975.8	40363.1	43356.5
A0A8I6A922	A0A8I6A922	A0A8I6A922_RAT	Cables2	Cdk5 and Abl enzyme substrate 2	1	FLYPTNALVTHK	FLYPTNALVTHK	3	FLYPTNALVTHK3	6838.75	8497.78	8421.53
D3ZVN7	D3ZVN7	D3ZVN7_RAT	Ppox	Amine oxidase	1	FLYVGGALHPLPSGLR	FLYVGGALHPLPSGLR	3	FLYVGGALHPLPSGLR3	15407.3	15047.6	9980.02
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	FLYYEMGYK	FLYYEMGYK	2	FLYYEMGYK2	273667	250605	281356
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	FMADCPHTIGVEFGTR	FMADC(UniMod:4)PHTIGVEFGTR	2	FMADC(UniMod:4)PHTIGVEFGTR2	9751.21	7347.38	4717.76
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	FMADCPHTIGVEFGTR	FMADC(UniMod:4)PHTIGVEFGTR	3	FMADC(UniMod:4)PHTIGVEFGTR3	326736	306413	297817
A0A0G2K2M3	A0A0G2K2M3	A0A0G2K2M3_RAT	Stat6	Signal transducer and activator of transcription	1	FMAEVGTSR	FMAEVGTSR	2	FMAEVGTSR2	10241.9	15829.5	9854.53
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	FMALICEASGGGAFLVLPLGK	FMALIC(UniMod:4)EASGGGAFLVLPLGK	3	FMALIC(UniMod:4)EASGGGAFLVLPLGK3	32960.6	36264.2	37705
F1LU27	F1LU27	F1LU27_RAT	Focad	Focadhesin	1	FMAMSDAPSLSVGK	FMAMSDAPSLSVGK	2	FMAMSDAPSLSVGK2	16829	12715.3	15976.7
P21213	P21213	HUTH_RAT	Hal	Histidine ammonia-lyase	1	FMAPDIEAAHR	FMAPDIEAAHR	3	FMAPDIEAAHR3	5525.54	5118.13	
A0A0G2K089	A0A0G2K089	A0A0G2K089_RAT	Dennd4c	DENN domain containing 4C	1	FMASVLK	FMASVLK	2	FMASVLK2	13096.7	12793.1	12530
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	FMATNDLMTELQK	FMATNDLMTELQK	2	FMATNDLMTELQK2	237350	265692	209295
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	FMATNDLMTELQK	FMATNDLMTELQK	3	FMATNDLMTELQK3	72682	86961	83194.1
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	FMATQLLAK	FMATQLLAK	2	FMATQLLAK2	19566.3	12584.9	10394.7
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	FMATSDLMSELQK	FMATSDLMSELQK	2	FMATSDLMSELQK2	19863.9	21803.9	15808.2
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	FMATSDLMSELQK	FMATSDLMSELQK	3	FMATSDLMSELQK3	7328.96	6977.44	9388.47
D3ZQ80	D3ZQ80	D3ZQ80_RAT	Smg8	Nonsense-mediated mRNA decay factor SMG8	1	FMCSGPDK	FMC(UniMod:4)SGPDK	2	FMC(UniMod:4)SGPDK2	10327.1	10057.3	10242.2
Q8R3Z7	Q8R3Z7	Q8R3Z7_RAT	Ehd4	EH-domain containing 4	1	FMCSQLPNQVLK	FMC(UniMod:4)SQLPNQVLK	2	FMC(UniMod:4)SQLPNQVLK2	73109.6	72426.2	71383
Q63525	Q63525	NUDC_RAT	Nudc	Nuclear migration protein nudC	1	FMDQHPEMDFSK	FMDQHPEMDFSK	3	FMDQHPEMDFSK3	44269.8	41417.5	27573.5
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	FMDTVAEK	FMDTVAEK	1	FMDTVAEK1	192027	197066	185013
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	FMDTVAEK	FMDTVAEK	2	FMDTVAEK2	76617.4	3.06379e+07	3.12416e+07
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	FMDTVAEKALQEYR	FMDTVAEKALQEYR	3	FMDTVAEKALQEYR3	13089	17529.3	15990.7
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	FMDTVIFTLYNYASNQR	FMDTVIFTLYNYASNQR	3	FMDTVIFTLYNYASNQR3	4385.62	3122.99	
F7F288	F7F288	F7F288_RAT	Bcap29	B-cell receptor-associated protein	1	FMEENER	FMEENER	2	FMEENER2	161370	123394	157869
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	FMEFVSVTVTHPELK	FMEFVSVTVTHPELK	3	FMEFVSVTVTHPELK3	4590.78	3915.38	
D3ZYB4	D3ZYB4	D3ZYB4_RAT	Lpin2	phosphatidate phosphatase	1	FMEHIITYHEFAENPGLIDNPNLVIR	FMEHIITYHEFAENPGLIDNPNLVIR	4	FMEHIITYHEFAENPGLIDNPNLVIR4	5759.04		3850.51
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	FMELLEPLNER	FMELLEPLNER	2	FMELLEPLNER2	921825	1.03612e+06	968800
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	FMELLEPLNER	FMELLEPLNER	3	FMELLEPLNER3	10111	8584.93	11149.1
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	FMELLEPLNERK	FMELLEPLNERK	2	FMELLEPLNERK2		2132.05	3531.36
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	FMELLEPLNERK	FMELLEPLNERK	3	FMELLEPLNERK3	26156.8	43769.1	64204.1
P52303	P52303	AP1B1_RAT	Ap1b1	AP-1 complex subunit beta-1	1	FMEMLSK	FMEMLSK	2	FMEMLSK2	31112.9	32692.4	22970.6
D3ZY44	D3ZY44	D3ZY44_RAT	Mrps2	Mitochondrial ribosomal protein S2	1	FMEPYIFGNR	FMEPYIFGNR	2	FMEPYIFGNR2	10142.7	7321.14	3745.28
Q4V7C7	Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	1	FMEQVIFK	FMEQVIFK	2	FMEQVIFK2	485135	431121	481611
Q91Y78	Q91Y78	UCHL3_RAT	Uchl3	Ubiquitin carboxyl-terminal hydrolase isozyme L3	1	FMERDPDELR	FMERDPDELR	3	FMERDPDELR3	120477	118845	112174
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	FMETADGNSAAVLQDR	FMETADGNSAAVLQDR	2	FMETADGNSAAVLQDR2	10557.3	5874.64	10483.6
P35280	P35280	RAB8A_RAT	Rab8a	Ras-related protein Rab-8A	1	FMETSAK	FMETSAK	1	FMETSAK1	2620.7	2348.9	4049.63
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	FMHNQVFIELNHIK	FMHNQVFIELNHIK	3	FMHNQVFIELNHIK3	5484.3	3539.07	
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	FMHNQVFIELNHIK	FMHNQVFIELNHIK	4	FMHNQVFIELNHIK4	2673.71	4744.07	4848.53
Q4QQU5	Q4QQU5	YIPF6_RAT	Yipf6	Protein YIPF6	1	FMHVLYPR	FMHVLYPR	2	FMHVLYPR2	7494.02	8392.22	7325.55
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	FMINLLQTFSSER	FMINLLQTFSSER	2	FMINLLQTFSSER2	18659.6	16493.8	20527.2
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	FMLLESGGLR	FMLLESGGLR	2	FMLLESGGLR2	11101.2	24039.2	10936.8
B5DFI3	B5DFI3	B5DFI3_RAT	Ap1s1	AP complex subunit sigma	1	FMLLFSR	FMLLFSR	2	FMLLFSR2	144408	136894	136392
Q5RKL5	Q5RKL5	STEA3_RAT	Steap3	Metalloreductase STEAP3	1	FMLPAGHTQGEK	FMLPAGHTQGEK	3	FMLPAGHTQGEK3	11641	21026.6	19956.2
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	FMLQDVIDLR	FMLQDVIDLR	2	FMLQDVIDLR2	19053.6		14202.9
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	FMLQDVLDLR	FMLQDVLDLR	2	FMLQDVLDLR2		41292.6	30293.9
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	FMLSPGNADILIQTK	FMLSPGNADILIQTK	2	FMLSPGNADILIQTK2	7354.98	13635.9	7069.99
Q91XJ1	Q91XJ1	BECN1_RAT	Becn1	Beclin-1	1	FMLTNLK	FMLTNLK	2	FMLTNLK2	23308.1	20082.3	20772.4
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	FMNPFNLPNLYQK	FMNPFNLPNLYQK	2	FMNPFNLPNLYQK2	33270.7	51042.4	34886.7
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	FMNPFNLPNLYQK	FMNPFNLPNLYQK	3	FMNPFNLPNLYQK3	11161.1	7238.28	5683.51
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	FMPAPQDADSKPR	FMPAPQDADSKPR	2	FMPAPQDADSKPR2	321090	254151	241531
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	FMPAPQDADSKPR	FMPAPQDADSKPR	3	FMPAPQDADSKPR3	4.28093e+06	5.17742e+06	5.16117e+06
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	FMPIVYTPTVGLACQQYSLAFR	FMPIVYTPTVGLAC(UniMod:4)QQYSLAFR	3	FMPIVYTPTVGLAC(UniMod:4)QQYSLAFR3	3105.81		10852.4
A0A8I5ZQ72	A0A8I5ZQ72;A0JPN4;D4A0I4;D4ACQ4	A0A8I5ZQ72_RAT	Zc3h12c	Zinc finger CCCH type containing 12C	0	FMPPDDPLGR	FMPPDDPLGR	2	FMPPDDPLGR2	34743.2	26179.7	30820.7
P37136	P37136	ACES_RAT	Ache	Acetylcholinesterase	1	FMPPEPK	FMPPEPK	2	FMPPEPK2	226198	216894	219984
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	FMPVEGMVFCSVECK	FMPVEGMVFC(UniMod:4)SVEC(UniMod:4)K	2	FMPVEGMVFC(UniMod:4)SVEC(UniMod:4)K2	29408.9	36063.6	27108.9
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	FMPVEGMVFCSVECK	FMPVEGMVFC(UniMod:4)SVEC(UniMod:4)K	3	FMPVEGMVFC(UniMod:4)SVEC(UniMod:4)K3	50934.8	47080.5	45056
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	FMPVEGMVFCSVECKK	FMPVEGMVFC(UniMod:4)SVEC(UniMod:4)KK	3	FMPVEGMVFC(UniMod:4)SVEC(UniMod:4)KK3		10198.7	15594.2
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	FMQDASDVMQLLLK	FMQDASDVMQLLLK	2	FMQDASDVMQLLLK2	53013.9	45990.2	60214.7
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	FMQDASDVMQLLLK	FMQDASDVMQLLLK	3	FMQDASDVMQLLLK3	17086.9	19993.8	14884.6
Q68HB8	Q68HB8	Q68HB8_RAT	Pcdh7	Protocadherin 7	1	FMQDVFTFYVK	FMQDVFTFYVK	2	FMQDVFTFYVK2	6521.85	3371.15	
D4A929	D4A929	WDR81_RAT	Wdr81	WD repeat-containing protein 81	1	FMQEVAAQNYR	FMQEVAAQNYR	2	FMQEVAAQNYR2	6085.12	8287.73	10017.2
Q99P63	Q99P63	MICU2_RAT	Micu2	Calcium uptake protein 2, mitochondrial	1	FMQFSSLEHDGEYYMTPR	FMQFSSLEHDGEYYMTPR	3	FMQFSSLEHDGEYYMTPR3	31728.5	30349.8	27566.7
D3ZYS7	D3ZYS7	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	1	FMQTFVLAPEGSVANK	FMQTFVLAPEGSVANK	2	FMQTFVLAPEGSVANK2	69422.7	78393.9	88666.5
D3ZYS7	D3ZYS7	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	1	FMQTFVLAPEGSVANK	FMQTFVLAPEGSVANK	3	FMQTFVLAPEGSVANK3	17534.8	15791.5	8450.86
F7F5P9	F7F5P9	F7F5P9_RAT	G3bp2	G3BP stress granule assembly factor 2	1	FMQTFVLAPEGSVPNK	FMQTFVLAPEGSVPNK	2	FMQTFVLAPEGSVPNK2	58563.6	57467.3	73103.6
F7F5P9	F7F5P9	F7F5P9_RAT	G3bp2	G3BP stress granule assembly factor 2	1	FMQTFVLAPEGSVPNK	FMQTFVLAPEGSVPNK	3	FMQTFVLAPEGSVPNK3	20023.6	18331.6	19958.2
P97523	P97523	MET_RAT	Met	Hepatocyte growth factor receptor	1	FMQVVLSR	FMQVVLSR	2	FMQVVLSR2	13583.7	8193.59	6873.26
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	FMSEAVIMK	FMSEAVIMK	2	FMSEAVIMK2	59293.2	61017.6	70840.9
Q5I6B8	Q5I6B8	PI51C_RAT	Pip5k1c	Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma	1	FMSSTVFR	FMSSTVFR	2	FMSSTVFR2	10338.3	36188.9	25797.9
Q794E4	Q794E4	HNRPF_RAT	Hnrnpf	Heterogeneous nuclear ribonucleoprotein F	1	FMSVQRPGPYDRPGTAR	FMSVQRPGPYDRPGTAR	4	FMSVQRPGPYDRPGTAR4	10941.8		10289.2
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	FMTPVIQDNPSGWGPCAVPEQFR	FMTPVIQDNPSGWGPC(UniMod:4)AVPEQFR	3	FMTPVIQDNPSGWGPC(UniMod:4)AVPEQFR3	26005.1	31812	33624
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	FMTTAMYDAR	FMTTAMYDAR	2	FMTTAMYDAR2	30629.2	29317.9	33780.6
Q5XHY5	Q5XHY5	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	1	FMVDIDLDPGCTLNK	FMVDIDLDPGC(UniMod:4)TLNK	2	FMVDIDLDPGC(UniMod:4)TLNK2	7138.62	7356.54	
Q9Z269	Q9Z269	VAPB_RAT	Vapb	Vesicle-associated membrane protein-associated protein B	1	FMVQSMFAPPDTSDMEAVWK	FMVQSMFAPPDTSDMEAVWK	3	FMVQSMFAPPDTSDMEAVWK3	55296.3	72008.3	65823.3
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	FMVQTIFAPPNISDMEAVWK	FMVQTIFAPPNISDMEAVWK	3	FMVQTIFAPPNISDMEAVWK3	48967.3	47283.3	58924.9
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	FMYDPQTDQNIK	FMYDPQTDQNIK	2	FMYDPQTDQNIK2	26897.7	36608.7	32797.5
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	FMYGPLDMVTLTGEK	FMYGPLDMVTLTGEK	2	FMYGPLDMVTLTGEK2	21864.9	26012.1	15323.6
Q5U2N3	Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	1	FMYGPLDVVTLTGEK	FMYGPLDVVTLTGEK	2	FMYGPLDVVTLTGEK2	4265.26	5209.01	5550.62
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	FMYTTPFTLEGR	FMYTTPFTLEGR	2	FMYTTPFTLEGR2	38199.1	31190.3	31480.6
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	FMYTTPFTLEGRPR	FMYTTPFTLEGRPR	3	FMYTTPFTLEGRPR3	79666.3	154529	176750
D3ZNK1	D3ZNK1	D3ZNK1_RAT	Mtx3	Metaxin	1	FNADCELSAK	FNADC(UniMod:4)ELSAK	2	FNADC(UniMod:4)ELSAK2	2045.99		6036.87
A0A8I5ZQF6	A0A8I5ZQF6;Q6PDV7;A0A8I5ZXK4	A0A8I5ZQF6_RAT	RGD1563861	Similar to ribosomal protein L10	0	FNADEFEDMVAEK	FNADEFEDMVAEK	2	FNADEFEDMVAEK2	11147.7	17002.9	13619.6
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	FNADQLNHLFVLIQK	FNADQLNHLFVLIQK	3	FNADQLNHLFVLIQK3		4262.42	2364.97
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	FNAEVDQITGYK	FNAEVDQITGYK	2	FNAEVDQITGYK2	486818	499237	477474
P11762	P11762	LEG1_RAT	Lgals1	Galectin-1	1	FNAHGDANTIVCNSK	FNAHGDANTIVC(UniMod:4)NSK	3	FNAHGDANTIVC(UniMod:4)NSK3	8997.21	8351.1	7050.68
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	FNAILCSR	FNAILC(UniMod:4)SR	2	FNAILC(UniMod:4)SR2	233338	210339	223787
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	FNALFAQGNYSEAAK	FNALFAQGNYSEAAK	2	FNALFAQGNYSEAAK2	568874	616174	638096
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	FNALFAQGNYSEAAK	FNALFAQGNYSEAAK	3	FNALFAQGNYSEAAK3		1816.19	3836.66
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	FNALFVR	FNALFVR	2	FNALFVR2	28746	26219.8	24491.5
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	FNALFVRPHIR	FNALFVRPHIR	3	FNALFVRPHIR3	68481.2	97236.2	84005.1
A0A8I5ZVX1	A0A8I5ZVX1	A0A8I5ZVX1_RAT	Ppfibp2	PPFIA binding protein 2	1	FNALIGPEAEQEK	FNALIGPEAEQEK	2	FNALIGPEAEQEK2	8700.08	6014.78	
A0A8I5ZVX1	A0A8I5ZVX1	A0A8I5ZVX1_RAT	Ppfibp2	PPFIA binding protein 2	1	FNALIGPEAEQEKR	FNALIGPEAEQEKR	3	FNALIGPEAEQEKR3	8852.65	5370.59	10198.3
Q9QYH7	Q9QYH7	GHRL_RAT	Ghrl	Appetite-regulating hormone	1	FNAPFDVGIK	FNAPFDVGIK	2	FNAPFDVGIK2	11168.1	11349.9	10204.5
Q5XIH7	Q5XIH7	PHB2_RAT	Phb2	Prohibitin-2	1	FNASQLITQR	FNASQLITQR	2	FNASQLITQR2	167758	156671	174628
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	FNCEQLETDLTASR	FNC(UniMod:4)EQLETDLTASR	2	FNC(UniMod:4)EQLETDLTASR2	9064.89	9849.59	7954.33
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	FNCEQLETDLTASR	FNC(UniMod:4)EQLETDLTASR	3	FNC(UniMod:4)EQLETDLTASR3	1380.29	5475.38	13176.6
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	FNCGTWMDK	FNC(UniMod:4)GTWMDK	2	FNC(UniMod:4)GTWMDK2	10626.5		11575.3
F7EXP7	F7EXP7	F7EXP7_RAT	Snx7	Sorting nexin 7	1	FNDDFIETR	FNDDFIETR	2	FNDDFIETR2	20304.3		15266.2
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	FNDEVKK	FNDEVKK	1	FNDEVKK1	10650.4		34348.8
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	FNDEVKK	FNDEVKK	2	FNDEVKK2	268157		807165
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	FNDGTDEK	FNDGTDEK	1	FNDGTDEK1	8808.59		28892.9
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	FNDGTDEK	FNDGTDEK	2	FNDGTDEK2	316199		173800
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	FNDGTDEKK	FNDGTDEKK	2	FNDGTDEKK2			20955.6
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	FNDILGR	FNDILGR	2	FNDILGR2	166454	192889	172874
D4A533	D4A533	D4A533_RAT	Tapt1	Transmembrane anterior posterior transformation 1	1	FNDITADVYSEYR	FNDITADVYSEYR	2	FNDITADVYSEYR2	8570.05	6485.22	7474.87
G3V965	G3V965	G3V965_RAT	Agpat5	1-acylglycerol-3-phosphate O-acyltransferase 5	1	FNDKEMR	FNDKEMR	2	FNDKEMR2	7955.9	11801.6	
Q4FZV0	Q4FZV0	MANBA_RAT	Manba	Beta-mannosidase	1	FNDLNYR	FNDLNYR	2	FNDLNYR2	48758.2	46576.2	41495.2
Q63372	Q63372;Q07310	NRX1A_RAT	Nrxn1	Neurexin-1	0	FNDNAWHDVK	FNDNAWHDVK	2	FNDNAWHDVK2	1271.47		
Q63372	Q63372;Q07310	NRX1A_RAT	Nrxn1	Neurexin-1	0	FNDNAWHDVK	FNDNAWHDVK	3	FNDNAWHDVK3		8346.68	12884.7
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	FNDTNVVHTVK	FNDTNVVHTVK	2	FNDTNVVHTVK2	3388.26	3987.5	1402.97
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	FNDYFEFPR	FNDYFEFPR	2	FNDYFEFPR2	137366	155947	139157
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	FNDYFEFPRELDMEPYTVAGVAK	FNDYFEFPRELDMEPYTVAGVAK	3	FNDYFEFPRELDMEPYTVAGVAK3	8223.31	9560.41	17342.8
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	FNEALLCGAVLLDTR	FNEALLC(UniMod:4)GAVLLDTR	2	FNEALLC(UniMod:4)GAVLLDTR2	100078	93934.4	96205.1
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	FNEALLCGAVLLDTR	FNEALLC(UniMod:4)GAVLLDTR	3	FNEALLC(UniMod:4)GAVLLDTR3	40340.7	50684.2	53880.8
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	FNEEHIPDSPFVVPVASPSGDAR	FNEEHIPDSPFVVPVASPSGDAR	3	FNEEHIPDSPFVVPVASPSGDAR3	9.08983e+06	9.59596e+06	9.75724e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	FNEEHIPDSPFVVPVASPSGDAR	FNEEHIPDSPFVVPVASPSGDAR	4	FNEEHIPDSPFVVPVASPSGDAR4	49092.7	48016.2	36571.6
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	FNEEHIPDSPFVVPVASPSGDARR	FNEEHIPDSPFVVPVASPSGDARR	4	FNEEHIPDSPFVVPVASPSGDARR4	15548.1	7222.51	14293.9
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	FNEENYGVK	FNEENYGVK	2	FNEENYGVK2	10333.2	11377.9	18642.4
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	FNEIVAPGHVQWMAMFK	FNEIVAPGHVQWMAMFK	3	FNEIVAPGHVQWMAMFK3	56592	51687.7	48479.3
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	FNENITFGQLGTFTHNMLAFGLNK	FNENITFGQLGTFTHNMLAFGLNK	3	FNENITFGQLGTFTHNMLAFGLNK3	15560.6	22804.5	19585.5
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	FNENITFGQLGTFTHNMLAFGLNKK	FNENITFGQLGTFTHNMLAFGLNKK	4	FNENITFGQLGTFTHNMLAFGLNKK4	13927.4	16458.1	17926.4
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	FNEVVSALK	FNEVVSALK	2	FNEVVSALK2	68085	74930.5	86345.6
P62025	P62025	PHAR2_RAT	Phactr2	Phosphatase and actin regulator 2	1	FNEYVEVTDSPDYDRR	FNEYVEVTDSPDYDRR	3	FNEYVEVTDSPDYDRR3	5732.2	5355.51	3772.46
E9PU03	E9PU03	E9PU03_RAT	Smg5	Nonsense-mediated mRNA decay factor	1	FNFDADRPLLSALEESVVR	FNFDADRPLLSALEESVVR	3	FNFDADRPLLSALEESVVR3		5654.48	
E9PU02	E9PU02	E9PU02_RAT	Trappc9	Trafficking protein particle complex subunit 9	1	FNFESVPESPGEK	FNFESVPESPGEK	2	FNFESVPESPGEK2	4621.24	10095.7	6489.51
A0A8I5Y7I2	A0A8I5Y7I2	A0A8I5Y7I2_RAT	Kctd12	Potassium channel tetramerization domain containing 12	1	FNFLEQAFDK	FNFLEQAFDK	2	FNFLEQAFDK2	118504	126492	94144.5
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	FNFPAAYFIHHR	FNFPAAYFIHHR	3	FNFPAAYFIHHR3	10631.2		
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	FNFPAAYFIHHR	FNFPAAYFIHHR	4	FNFPAAYFIHHR4	4463.28	1804.69	
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	FNFQGYSQDK	FNFQGYSQDK	2	FNFQGYSQDK2	41759.3	39678.9	33469.8
P13721	P13721	SIAT1_RAT	St6gal1	Beta-galactoside alpha-2,6-sialyltransferase 1	1	FNGAPTDNFQQDVGSK	FNGAPTDNFQQDVGSK	2	FNGAPTDNFQQDVGSK2	8748.27	4860.56	6381.78
P07895	P07895	SODM_RAT	Sod2	Superoxide dismutase [Mn], mitochondrial	1	FNGGGHINHSIFWTNLSPK	FNGGGHINHSIFWTNLSPK	3	FNGGGHINHSIFWTNLSPK3	108387	94755.4	110247
P07895	P07895	SODM_RAT	Sod2	Superoxide dismutase [Mn], mitochondrial	1	FNGGGHINHSIFWTNLSPK	FNGGGHINHSIFWTNLSPK	4	FNGGGHINHSIFWTNLSPK4	107540	131162	112482
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	FNGLLCHILDYSFTGGAGR	FNGLLC(UniMod:4)HILDYSFTGGAGR	3	FNGLLC(UniMod:4)HILDYSFTGGAGR3	13906.8	19433.4	9122.32
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	FNGPCDPCQGSMSDLNHICR	FNGPC(UniMod:4)DPC(UniMod:4)QGSMSDLNHIC(UniMod:4)R	3	FNGPC(UniMod:4)DPC(UniMod:4)QGSMSDLNHIC(UniMod:4)R3	9239.81	9082.42	7081.85
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	FNGTHIPGSPFK	FNGTHIPGSPFK	2	FNGTHIPGSPFK2	548589	460340	531425
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	FNGTHIPGSPFK	FNGTHIPGSPFK	3	FNGTHIPGSPFK3	3.85631e+06	3.91919e+06	4.54522e+06
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	FNHFSLNLNTNHGHILLDYSK	FNHFSLNLNTNHGHILLDYSK	3	FNHFSLNLNTNHGHILLDYSK3	3751.43	6076.48	
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	FNHFSLNLNTNHGHILLDYSK	FNHFSLNLNTNHGHILLDYSK	4	FNHFSLNLNTNHGHILLDYSK4	3152.88	5059.57	4197.98
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	FNHWELK	FNHWELK	2	FNHWELK2	6552.09	7548.9	3760.37
A0A8I6GBD2	A0A8I6GBD2	A0A8I6GBD2_RAT	Actr10	Actin related protein 10	1	FNIDGNNERPSPPPNVDYPLDGEK	FNIDGNNERPSPPPNVDYPLDGEK	3	FNIDGNNERPSPPPNVDYPLDGEK3	19627.9		19775.7
Q64591	Q64591	DECR_RAT	Decr1	2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], mitochondrial	1	FNIIQPGPIK	FNIIQPGPIK	2	FNIIQPGPIK2	30936.6	29360.9	41563.3
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	FNILGTNTK	FNILGTNTK	2	FNILGTNTK2	50291.9	34088.2	49281.3
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	FNILTSNQK	FNILTSNQK	2	FNILTSNQK2	64317.2	70397.9	69446.4
Q5FVI6	Q5FVI6	VATC1_RAT	Atp6v1c1	V-type proton ATPase subunit C 1	1	FNIPDLK	FNIPDLK	2	FNIPDLK2	30966.2	28911.7	27127.1
A0A8I5ZKD4	A0A8I5ZKD4	A0A8I5ZKD4_RAT	Nhlrc3	NHL repeat containing 3	1	FNIPHSVTLDSVGR	FNIPHSVTLDSVGR	2	FNIPHSVTLDSVGR2	10472.3		8429.73
A0A8I5ZKD4	A0A8I5ZKD4	A0A8I5ZKD4_RAT	Nhlrc3	NHL repeat containing 3	1	FNIPHSVTLDSVGR	FNIPHSVTLDSVGR	3	FNIPHSVTLDSVGR3	32059.4	32094.6	36002.8
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	FNIPVNHK	FNIPVNHK	2	FNIPVNHK2	177693	134261	130601
P38652	P38652	PGM1_RAT	Pgm1	Phosphoglucomutase-1	1	FNISNGGPAPEAITDK	FNISNGGPAPEAITDK	2	FNISNGGPAPEAITDK2	1168.9	3490.43	
Q704S8	Q704S8	CACP_RAT	Crat	Carnitine O-acetyltransferase	1	FNITPEIK	FNITPEIK	2	FNITPEIK2	14991.2	14858	10459.8
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	FNIWGGSLSLGHPFGATGCR	FNIWGGSLSLGHPFGATGC(UniMod:4)R	3	FNIWGGSLSLGHPFGATGC(UniMod:4)R3	56899.9	69175.9	70020.3
P31211	P31211	CBG_RAT	Serpina6	Corticosteroid-binding globulin	1	FNKPFILLLFDK	FNKPFILLLFDK	3	FNKPFILLLFDK3	23034.7	17630.5	14696.1
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	FNKVPEWQR	FNKVPEWQR	3	FNKVPEWQR3	18696.4	17726.4	13424.7
Q63635	Q63635	STX6_RAT	Stx6	Syntaxin-6	1	FNLDATELSIR	FNLDATELSIR	2	FNLDATELSIR2	18153.3	18195.2	18764.9
Q63635	Q63635	STX6_RAT	Stx6	Syntaxin-6	1	FNLDATELSIRK	FNLDATELSIRK	3	FNLDATELSIRK3		3578.88	
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	FNLETEWK	FNLETEWK	2	FNLETEWK2	112474	79549.9	102514
A0A8I6GL10	A0A8I6GL10	A0A8I6GL10_RAT	Uchl5	Ubiquitin carboxyl-terminal hydrolase	1	FNLMAIVSDR	FNLMAIVSDR	2	FNLMAIVSDR2	14954.8	18326.7	15722.2
A0A8I6GL10	A0A8I6GL10	A0A8I6GL10_RAT	Uchl5	Ubiquitin carboxyl-terminal hydrolase	1	FNLMAIVSDRK	FNLMAIVSDRK	3	FNLMAIVSDRK3	5109.4	3557.6	5677.54
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	FNLMQVGR	FNLMQVGR	2	FNLMQVGR2	105947	96557.3	91274.2
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	FNLNFPPSEIISPEK	FNLNFPPSEIISPEK	2	FNLNFPPSEIISPEK2		3658.72	
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	FNLSSHNQSPK	FNLSSHNQSPK	3	FNLSSHNQSPK3	2848.29	9438.03	
P05544	A0A0G2JSK1;P05544;P05545	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	FNLTEITEEEIHQGFGHLLQR	FNLTEITEEEIHQGFGHLLQR	4	FNLTEITEEEIHQGFGHLLQR4	10538.4	13526.3	
P67874	P67874	CSK2B_RAT	Csnk2b	Casein kinase II subunit beta	1	FNLTGLNEQVPHYR	FNLTGLNEQVPHYR	2	FNLTGLNEQVPHYR2	8227.38	6418.29	6172.81
P67874	P67874	CSK2B_RAT	Csnk2b	Casein kinase II subunit beta	1	FNLTGLNEQVPHYR	FNLTGLNEQVPHYR	3	FNLTGLNEQVPHYR3	150677	157838	156604
Q5XHY5	Q5XHY5	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	1	FNLTYVSHDGDDK	FNLTYVSHDGDDK	3	FNLTYVSHDGDDK3	4236.37	5216.5	
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	FNMALVQQMEK	FNMALVQQMEK	2	FNMALVQQMEK2	8.91623e+06	18256	17305.5
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	FNMALVQQMEK	FNMALVQQMEK	3	FNMALVQQMEK3	31989.1	25618.5	45367.1
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	FNMIPFEHR	FNMIPFEHR	2	FNMIPFEHR2	23597.8	16168.8	22250.1
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	FNMIPFEHR	FNMIPFEHR	3	FNMIPFEHR3	66496	55495.2	60903.7
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	FNMVIPLVDGMIVSR	FNMVIPLVDGMIVSR	2	FNMVIPLVDGMIVSR2	10894.8	7878.48	5862.05
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	FNNSSLR	FNNSSLR	2	FNNSSLR2	115086	119400	91442.9
D4ACF2	D4ACF2	D4ACF2_RAT	Trim21	RING-type E3 ubiquitin transferase	1	FNNYPMVLGAQR	FNNYPMVLGAQR	2	FNNYPMVLGAQR2	6566.29	5641.42	7560.45
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	FNPDGEEEDVTVHE	FNPDGEEEDVTVHE	2	FNPDGEEEDVTVHE2	51861.2	46398.7	39530.7
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	FNPELSK	FNPELSK	2	FNPELSK2		66048.5	
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	FNPETDFLTGK	FNPETDFLTGK	2	FNPETDFLTGK2	222912	196137	218982
P12749	P12749;D4A1Z2;D4AE42	RL26_RAT	Rpl26	Large ribosomal subunit protein uL24	0	FNPFVTSDR	FNPFVTSDR	2	FNPFVTSDR2	61653.3	54596.1	55877.6
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	FNPHVHVEYEWNLR	FNPHVHVEYEWNLR	3	FNPHVHVEYEWNLR3		4793.28	
Q7TP53	Q7TP53	Q7TP53_RAT	Il2rg	Ab2-183	1	FNPICGSTQQWSK	FNPIC(UniMod:4)GSTQQWSK	2	FNPIC(UniMod:4)GSTQQWSK2	16245.5	9846.82	22468.2
D3ZGB8	D3ZGB8	D3ZGB8_RAT	Cilp	Cartilage intermediate layer protein	1	FNPNAIGVPQPYLNK	FNPNAIGVPQPYLNK	2	FNPNAIGVPQPYLNK2	20275.8	20238.1	12623.8
Q3B7D1	Q3B7D1	UBE2Z_RAT	Ube2z	Ubiquitin-conjugating enzyme E2 Z	1	FNPNFYR	FNPNFYR	2	FNPNFYR2	164183	159520	182588
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	FNPNLYNDGK	FNPNLYNDGK	2	FNPNLYNDGK2	17488.7	24897.5	20881.4
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	FNPSISMIK	FNPSISMIK	2	FNPSISMIK2	35261.1	51622	38537.9
E9PU37	E9PU37	E9PU37_RAT	Zdhhc13	Palmitoyltransferase	1	FNPSLSAVDK	FNPSLSAVDK	2	FNPSLSAVDK2	46488	69946.8	43602.6
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	FNPVFLKPQDFSSVHGINEK	FNPVFLKPQDFSSVHGINEK	3	FNPVFLKPQDFSSVHGINEK3	22707.3	22523.4	17736
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	FNPVFLKPQDFSSVHGINEK	FNPVFLKPQDFSSVHGINEK	4	FNPVFLKPQDFSSVHGINEK4	74686.5	97363.7	95511.6
D3ZRC4	D3ZRC4	PLPL8_RAT	Pnpla8	Calcium-independent phospholipase A2-gamma	1	FNPVICENIPLDESR	FNPVIC(UniMod:4)ENIPLDESR	2	FNPVIC(UniMod:4)ENIPLDESR2	13993.9	21958.7	11700.4
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	FNPVTGEVPPR	FNPVTGEVPPR	2	FNPVTGEVPPR2	767568	718838	746611
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	FNPVTGEVPPR	FNPVTGEVPPR	3	FNPVTGEVPPR3	27589.3	35281	27762.8
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	FNPVTGEVPPRYPLDAR	FNPVTGEVPPRYPLDAR	3	FNPVTGEVPPRYPLDAR3	79256.4	149852	137830
F1M9D6	F1M9D6	F1M9D6_RAT	Stat1	Signal transducer and activator of transcription	1	FNQAQEGNIQNTVMLDK	FNQAQEGNIQNTVMLDK	2	FNQAQEGNIQNTVMLDK2	1573.34	1962.6	
Q9R1T3	Q9R1T3	CATZ_RAT	Ctsz	Cathepsin Z	1	FNQCGTCTEFK	FNQC(UniMod:4)GTC(UniMod:4)TEFK	2	FNQC(UniMod:4)GTC(UniMod:4)TEFK2	10596.8	5191.37	6850.59
A0A8I6AL43	A0A8I6AL43	A0A8I6AL43_RAT	Ate1	Arginyl-tRNA--protein transferase 1	1	FNQDPQAEDEGR	FNQDPQAEDEGR	2	FNQDPQAEDEGR2	14002.6	14438	12108.8
D3ZXK7	D3ZXK7	RN123_RAT	Rnf123	E3 ubiquitin-protein ligase RNF123	1	FNQEEGVGDTHNSYAYDGNR	FNQEEGVGDTHNSYAYDGNR	3	FNQEEGVGDTHNSYAYDGNR3		2134.72	3649.17
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	FNQEQWEYYHTHIPNIFQK	FNQEQWEYYHTHIPNIFQK	4	FNQEQWEYYHTHIPNIFQK4	27602.5	26422.4	33384.5
Q4G063	Q4G063	CREL2_RAT	Creld2	Protein disulfide isomerase Creld2	1	FNQGMANTAR	FNQGMANTAR	2	FNQGMANTAR2	128998	140595	152084
P70560	P70560	COCA1_RAT	Col12a1	Collagen alpha-1(XII) chain (Fragment)	1	FNQMLNQIPNDYHSNR	FNQMLNQIPNDYHSNR	3	FNQMLNQIPNDYHSNR3	6813.07	8556.33	11070.4
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	FNQMVVK	FNQMVVK	2	FNQMVVK2	25173.1	28206	17479
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	FNQNMEGLK	FNQNMEGLK	2	FNQNMEGLK2	85680.6	1.15382e+07	1.17633e+07
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	FNQNMEGLKGQLTPR	FNQNMEGLKGQLTPR	3	FNQNMEGLKGQLTPR3	28802.9	27546.1	41461.7
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	FNQTYQLAHGTAEEK	FNQTYQLAHGTAEEK	3	FNQTYQLAHGTAEEK3	4417.55		5958.17
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	FNQVESDKLR	FNQVESDKLR	2	FNQVESDKLR2	9569.7	6836.74	14814.9
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	FNQVESDKLR	FNQVESDKLR	3	FNQVESDKLR3	145057	164505	148669
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	FNQVLDQFGEK	FNQVLDQFGEK	2	FNQVLDQFGEK2	152614	207780	223138
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	FNRDVDETIGWIK	FNRDVDETIGWIK	2	FNRDVDETIGWIK2	7679.48	6165.08	6104.53
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	FNRDVDETIGWIK	FNRDVDETIGWIK	3	FNRDVDETIGWIK3	117647	145922	168907
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	FNRYPLIIDPSGQATEFIMNEYK	FNRYPLIIDPSGQATEFIMNEYK	3	FNRYPLIIDPSGQATEFIMNEYK3	20821.6	11194.7	19899.6
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	FNRYPLIIDPSGQATEFIMNEYKDR	FNRYPLIIDPSGQATEFIMNEYKDR	4	FNRYPLIIDPSGQATEFIMNEYKDR4	9713.82	18731.7	18578.8
P31722	P31722	C1QC_RAT	C1qc	Complement C1q subcomponent subunit C	1	FNSAITNPQGDYNTNTGK	FNSAITNPQGDYNTNTGK	2	FNSAITNPQGDYNTNTGK2	30815.3	33236.6	22581.3
P31722	P31722	C1QC_RAT	C1qc	Complement C1q subcomponent subunit C	1	FNSAITNPQGDYNTNTGK	FNSAITNPQGDYNTNTGK	3	FNSAITNPQGDYNTNTGK3	12279	13533.6	12814.6
P04762	P04762	CATA_RAT	Cat	Catalase	1	FNSANEDNVTQVR	FNSANEDNVTQVR	2	FNSANEDNVTQVR2	12047.6	7537.83	13294.9
P04762	P04762	CATA_RAT	Cat	Catalase	1	FNSANEDNVTQVR	FNSANEDNVTQVR	3	FNSANEDNVTQVR3			2938.14
Q9QX79	Q9QX79	FETUB_RAT	Fetub	Fetuin-B	1	FNSENPSK	FNSENPSK	1	FNSENPSK1	50278.9		38738.7
Q9QX79	Q9QX79	FETUB_RAT	Fetub	Fetuin-B	1	FNSENPSK	FNSENPSK	2	FNSENPSK2	1.24774e+06		1.22975e+06
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	FNSHVHVEYEWR	FNSHVHVEYEWR	3	FNSHVHVEYEWR3	3900.81		3155.48
P35284	P35284	RAB12_RAT	Rab12	Ras-related protein Rab-12	1	FNSITSAYYR	FNSITSAYYR	2	FNSITSAYYR2	52910	41263.2	41182.4
P62994	P62994	GRB2_RAT	Grb2	Growth factor receptor-bound protein 2	1	FNSLNELVDYHR	FNSLNELVDYHR	2	FNSLNELVDYHR2	8023.91	7264.64	11720.7
P62994	P62994	GRB2_RAT	Grb2	Growth factor receptor-bound protein 2	1	FNSLNELVDYHR	FNSLNELVDYHR	3	FNSLNELVDYHR3	72086.5	54852.5	56988.6
P20673	P20673	ARLY_RAT	Asl	Argininosuccinate lyase	1	FNSSIAYDR	FNSSIAYDR	2	FNSSIAYDR2	8250.13	12012	9186.01
O55004	O55004	RNAS4_RAT	Rnase4	Ribonuclease 4	1	FNTFIHEDIWNIR	FNTFIHEDIWNIR	2	FNTFIHEDIWNIR2	2834.94		
O55004	O55004	RNAS4_RAT	Rnase4	Ribonuclease 4	1	FNTFIHEDIWNIR	FNTFIHEDIWNIR	3	FNTFIHEDIWNIR3	14332.5	21190.5	14050.3
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	FNTGSNPTEEVSTSSR	FNTGSNPTEEVSTSSR	2	FNTGSNPTEEVSTSSR2	324043	278865	263464
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	FNTGSNPTEEVSTSSR	FNTGSNPTEEVSTSSR	3	FNTGSNPTEEVSTSSR3	33892.3	41137.7	35342.7
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	FNTGSNPTEEVSTSSRPFK	FNTGSNPTEEVSTSSRPFK	3	FNTGSNPTEEVSTSSRPFK3	1.08822e+06	1.25857e+06	1.34471e+06
D4AB70	D4AB70	D4AB70_RAT	Edem3	alpha-1,2-Mannosidase	1	FNTHYDAIMR	FNTHYDAIMR	3	FNTHYDAIMR3		4926.53	3563.39
A0JPJ7	A0JPJ7	OLA1_RAT	Ola1	Obg-like ATPase 1	1	FNTPQQSK	FNTPQQSK	2	FNTPQQSK2	22854	25915.9	21620.4
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	FNTSDVSAIEK	FNTSDVSAIEK	2	FNTSDVSAIEK2	123127	103613	102156
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	FNTSDVSAIEKDK	FNTSDVSAIEKDK	2	FNTSDVSAIEKDK2	4344.43	3864.37	4228.49
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	FNTSDVSAIEKDK	FNTSDVSAIEKDK	3	FNTSDVSAIEKDK3	27566.5	34060.9	25591.6
Q5XIN7	Q5XIN7	PMGT1_RAT	Pomgnt1	Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1	1	FNTVPGVQLR	FNTVPGVQLR	2	FNTVPGVQLR2	19970.5	14708.5	16633.3
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	FNVEDGEIVQQVR	FNVEDGEIVQQVR	2	FNVEDGEIVQQVR2	18005	10611	14085.3
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	FNVEDGEIVQQVR	FNVEDGEIVQQVR	3	FNVEDGEIVQQVR3		3723.77	7513.62
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	FNVLCDVSGK	FNVLC(UniMod:4)DVSGK	2	FNVLC(UniMod:4)DVSGK2	99852.3	108859	102022
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	FNVLQYVVPEVK	FNVLQYVVPEVK	2	FNVLQYVVPEVK2	146620	154225	181192
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	FNVLQYVVPEVK	FNVLQYVVPEVK	3	FNVLQYVVPEVK3	11563.6	6281.35	6585.59
P62828	Q8K586;P62828;Q66H11	RAN_RAT	Ran	GTP-binding nuclear protein Ran	0	FNVWDTAGQEK	FNVWDTAGQEK	2	FNVWDTAGQEK2	127873	108972	139309
P62332	P62332	ARF6_RAT	Arf6	ADP-ribosylation factor 6	1	FNVWDVGGQDK	FNVWDVGGQDK	2	FNVWDVGGQDK2	193143	191136	202175
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	FNYGFEYLGVQDK	FNYGFEYLGVQDK	2	FNYGFEYLGVQDK2	44729.8	49376.5	57061.5
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	FNYGFEYLGVQDK	FNYGFEYLGVQDK	3	FNYGFEYLGVQDK3	9192.7	13495.3	10474.6
B2RZ33	B2RZ33	B2RZ33_RAT	Nck1	Cytoplasmic protein	1	FNYMAEREDELSLIK	FNYMAEREDELSLIK	3	FNYMAEREDELSLIK3	26374.6	22160.7	24223
Q5XIA1	Q5XIA1	NCLN_RAT	Ncln	BOS complex subunit NCLN	1	FNYQGTK	FNYQGTK	2	FNYQGTK2	28041.9	34990	28907
P07335	P07335	KCRB_RAT	Ckb	Creatine kinase B-type	1	FPAEDEFPDLSSHNNHMAK	FPAEDEFPDLSSHNNHMAK	4	FPAEDEFPDLSSHNNHMAK4	123727	72820.4	109539
E9PT79	E9PT79	E9PT79_RAT	Tsn	Translin	1	FPAEQYYR	FPAEQYYR	2	FPAEQYYR2	10407.1	10225.3	9092.89
Q68FQ9	Q68FQ9	Q68FQ9_RAT	Lancl2	LanC lantibiotic synthetase component C-like 2 (Bacterial)	1	FPAFELGFVQKD	FPAFELGFVQKD	2	FPAFELGFVQKD2	7782.25	2393.02	9158.68
D3ZF97	D3ZF97	D3ZF97_RAT	Erlec1	Endoplasmic reticulum lectin	1	FPAIHKPIAVGSQPVLTVGTTHISK	FPAIHKPIAVGSQPVLTVGTTHISK	4	FPAIHKPIAVGSQPVLTVGTTHISK4	4556.47	5029.78	
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	FPALSYYCK	FPALSYYC(UniMod:4)K	2	FPALSYYC(UniMod:4)K2	45166.9	82122.7	56176.7
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	FPAMSDAYDR	FPAMSDAYDR	2	FPAMSDAYDR2	69259.1	50828.3	56387.7
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	FPAMSDAYDRDMR	FPAMSDAYDRDMR	3	FPAMSDAYDRDMR3	19066.7	32427.6	42654.8
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	FPAVETR	FPAVETR	2	FPAVETR2	36687.6	44629.9	28126
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	FPAVGEPNIQQYAQNMGLPQNR	FPAVGEPNIQQYAQNMGLPQNR	3	FPAVGEPNIQQYAQNMGLPQNR3	11267.5	11815.4	
Q62931	Q62931	GOSR1_RAT	Gosr1	Golgi SNAP receptor complex member 1	1	FPAVNSLIQR	FPAVNSLIQR	2	FPAVNSLIQR2	51350.7	31460.4	51466.8
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	FPCVTLWDLPGIGSPAFQPHDYLK	FPC(UniMod:4)VTLWDLPGIGSPAFQPHDYLK	3	FPC(UniMod:4)VTLWDLPGIGSPAFQPHDYLK3	24014.6	17239.9	14982.3
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	FPDAFVTFSAFR	FPDAFVTFSAFR	2	FPDAFVTFSAFR2	11890.5	11489	15800.9
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	FPDDLYR	FPDDLYR	2	FPDDLYR2	73277.2	68040.3	54239.4
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	FPDEDEILEK	FPDEDEILEK	2	FPDEDEILEK2	128385	121103	140184
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	FPDELAHVEK	FPDELAHVEK	2	FPDELAHVEK2		3974.26	
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	FPDELAHVEK	FPDELAHVEK	3	FPDELAHVEK3	45328.5	56887.3	39478.3
P24368	P24368	PPIB_RAT	Ppib	Peptidyl-prolyl cis-trans isomerase B	1	FPDENFK	FPDENFK	2	FPDENFK2	243131	229142	205283
P29117	P29117	PPIF_RAT	Ppif	Peptidyl-prolyl cis-trans isomerase F, mitochondrial	1	FPDENFTLK	FPDENFTLK	2	FPDENFTLK2	640390	707814	627510
D4AAU6	D4AAU6	D4AAU6_RAT	Ccdc25	Coiled-coil domain-containing protein 25	1	FPDLAAEK	FPDLAAEK	2	FPDLAAEK2	8752.58		
A0A8I6ARV9	A0A8I6ARV9	A0A8I6ARV9_RAT	Ctsa	Carboxypeptidase	1	FPEALLLR	FPEALLLR	2	FPEALLLR2	24672.2	21660.1	18132.1
D3Z8F6	D3Z8F6	D3Z8F6_RAT	Dennd1b	DENN domain containing 1B	1	FPEDFGDQEVLQSVPR	FPEDFGDQEVLQSVPR	3	FPEDFGDQEVLQSVPR3		7982.23	8897.87
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	FPEHELNVDPQR	FPEHELNVDPQR	3	FPEHELNVDPQR3	32757.4	27739.5	38181.7
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	FPEILQK	FPEILQK	2	FPEILQK2	21817.8	18834.4	15693.8
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	FPELNYQLK	FPELNYQLK	2	FPELNYQLK2	39180.5	36040.7	33991.5
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	FPEQAGTLQNAATSSSLTAHLR	FPEQAGTLQNAATSSSLTAHLR	3	FPEQAGTLQNAATSSSLTAHLR3	1622.09	3921.5	
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	FPESLTR	FPESLTR	2	FPESLTR2	236665	271930	264528
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	FPEVEDVVMVNVR	FPEVEDVVMVNVR	2	FPEVEDVVMVNVR2	54737.4	42501.1	39634.4
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	FPEVEDVVMVNVR	FPEVEDVVMVNVR	3	FPEVEDVVMVNVR3	36488.5	40958.4	33134.6
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	FPEVPEAACQLVSLEGLSLYHNCLR	FPEVPEAAC(UniMod:4)QLVSLEGLSLYHNC(UniMod:4)LR	3	FPEVPEAAC(UniMod:4)QLVSLEGLSLYHNC(UniMod:4)LR3	5551.84		6529.48
Q3KR57	Q3KR57	Q3KR57_RAT	Grap2	GRB2-related adaptor protein 2	1	FPEWFHEGLSR	FPEWFHEGLSR	3	FPEWFHEGLSR3	13893.3		13292.2
P39052	P39052;P21575	DYN2_RAT	Dnm2	Dynamin-2	0	FPFELVK	FPFELVK	2	FPFELVK2	227091	190930	167756
O54923	O54923	EXOC6_RAT	Exoc6	Exocyst complex component 6	1	FPFQDPDLEK	FPFQDPDLEK	2	FPFQDPDLEK2		6450.37	16377.6
P07633	P07633	PCCB_RAT	Pccb	Propionyl-CoA carboxylase beta chain, mitochondrial	1	FPGDSVVTGR	FPGDSVVTGR	2	FPGDSVVTGR2			7608.47
D3ZWR1	D3ZWR1	D3ZWR1_RAT	Nt5c	5', 3'-nucleotidase, cytosolic	1	FPGEPHVPLEQR	FPGEPHVPLEQR	3	FPGEPHVPLEQR3	6409.33	8571.96	5347.13
Q6AXM8	Q6AXM8	PON2_RAT	Pon2	Serum paraoxonase/arylesterase 2	1	FPGLHSFAPDKPGGILMMDLK	FPGLHSFAPDKPGGILMMDLK	4	FPGLHSFAPDKPGGILMMDLK4	8640.17	11674.3	11789.5
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	FPGLNENLR	FPGLNENLR	2	FPGLNENLR2	107275	101236	86477.4
P85108	P69897;Q4QRB4;M0R8B6;Q6P9T8;B4F7C2;P85108;Q4QQV0;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	FPGQLNADLR	FPGQLNADLR	2	FPGQLNADLR2	5.87278e+06	6.03194e+06	6.51928e+06
P85108	P69897;Q4QRB4;M0R8B6;Q6P9T8;B4F7C2;P85108;Q4QQV0;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	FPGQLNADLRK	FPGQLNADLRK	2	FPGQLNADLRK2	281904	260132	240331
P85108	P69897;Q4QRB4;M0R8B6;Q6P9T8;B4F7C2;P85108;Q4QQV0;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	FPGQLNADLRK	FPGQLNADLRK	3	FPGQLNADLRK3	2.97456e+06	5.21769e+06	4.8331e+06
Q6P752	Q6P752	TOIP2_RAT	Tor1aip2	Torsin-1A-interacting protein 2	1	FPGQSAFLWQR	FPGQSAFLWQR	2	FPGQSAFLWQR2	12513.4	6802.71	11028.4
D3ZWA1	D3ZWA1	D3ZWA1_RAT	Mindy2	Ubiquitin carboxyl-terminal hydrolase	1	FPGQSVYHIK	FPGQSVYHIK	3	FPGQSVYHIK3	4999.32	5696.28	2275.01
Q99372	Q99372	ELN_RAT	Eln	Elastin	1	FPGVGVLPGVPTGTGVK	FPGVGVLPGVPTGTGVK	2	FPGVGVLPGVPTGTGVK2	9808.3	12571.2	9313.91
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	FPHVDLVVQR	FPHVDLVVQR	3	FPHVDLVVQR3	20136.5	16248.4	11818.3
A0A8J8Y4N8	A0A8J8Y4N8	A0A8J8Y4N8_RAT	Ube2r2	Ubiquitin-conjugating enzyme E2R 2	1	FPIDYPYSPPTFR	FPIDYPYSPPTFR	2	FPIDYPYSPPTFR2	6824.04	15790	20927.5
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	FPILGVHLK	FPILGVHLK	2	FPILGVHLK2	9652.09	7634.64	5965.64
P21588	P21588	5NTD_RAT	Nt5e	5'-nucleotidase	1	FPILSANIK	FPILSANIK	2	FPILSANIK2	21902	11756.1	18055.9
A0A0G2KAE1	A0A0G2KAE1	A0A0G2KAE1_RAT	Lims2	LIM and senescent cell antigen-like-containing domain protein	1	FPLELKK	FPLELKK	2	FPLELKK2	53920.4	35566.8	41944.8
P20611	P20611	PPAL_RAT	Acp2	Lysosomal acid phosphatase	1	FPLGPCPR	FPLGPC(UniMod:4)PR	2	FPLGPC(UniMod:4)PR2	42358.4	34360.9	33005
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	FPLHLLVWNNDYR	FPLHLLVWNNDYR	2	FPLHLLVWNNDYR2	2424.17	3796.62	1439.2
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	FPLHLLVWNNDYR	FPLHLLVWNNDYR	3	FPLHLLVWNNDYR3	58041.3	46012.8	54047.2
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	FPLLVGHMEK	FPLLVGHMEK	3	FPLLVGHMEK3	13558.1	10331.8	16681
P62752	D3ZSR8;F1LT35;P62752;D4AAL7;D3ZTX9	RL23A_RAT	Rpl23a	Large ribosomal subunit protein uL23	0	FPLTTESAMK	FPLTTESAMK	2	FPLTTESAMK2	14097.1	14076.9	
P70569	P70569	MYO5B_RAT	Myo5b	Unconventional myosin-Vb	1	FPLVADLFR	FPLVADLFR	2	FPLVADLFR2	5178.79	9002.36	12209.1
P08689	P08689	SHBG_RAT	Shbg	Sex hormone-binding globulin	1	FPLVPALDGCIR	FPLVPALDGC(UniMod:4)IR	2	FPLVPALDGC(UniMod:4)IR2	26505.9	21525.6	33711.7
D4A4P4	D4A4P4	D4A4P4_RAT	Flad1	FAD synthase	1	FPLVSVR	FPLVSVR	2	FPLVSVR2	26154.6	23421.1	16906.7
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	FPLYNLGFGNNLNYNFLESLALENHGFAR	FPLYNLGFGNNLNYNFLESLALENHGFAR	4	FPLYNLGFGNNLNYNFLESLALENHGFAR4	62899.4	80406.1	56035.8
P20909	P20909	COBA1_RAT	Col11a1	Collagen alpha-1(XI) chain	1	FPMGTQTNPAR	FPMGTQTNPAR	2	FPMGTQTNPAR2	6705.91		
P02770	P02770	ALBU_RAT	Alb	Albumin	1	FPNAEFAEITK	FPNAEFAEITK	2	FPNAEFAEITK2	2.25206e+07	2.24103e+07	2.16382e+07
P02770	P02770	ALBU_RAT	Alb	Albumin	1	FPNAEFAEITK	FPNAEFAEITK	3	FPNAEFAEITK3	34199	43347.5	40378.2
P02770	P02770	ALBU_RAT	Alb	Albumin	1	FPNAEFAEITKLATDVTK	FPNAEFAEITKLATDVTK	3	FPNAEFAEITKLATDVTK3		9249.59	
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	FPNIGVEK	FPNIGVEK	2	FPNIGVEK2	108854	100024	97145.2
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	FPPNIVNIHVK	FPPNIVNIHVK	3	FPPNIVNIHVK3	12592.6	9639.32	3615.92
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	FPQLDDTSFANSR	FPQLDDTSFANSR	2	FPQLDDTSFANSR2	32599	25098.7	22204.9
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	FPQPLNMLEHLASK	FPQPLNMLEHLASK	2	FPQPLNMLEHLASK2	57081	47176	57429
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	FPQPLNMLEHLASK	FPQPLNMLEHLASK	3	FPQPLNMLEHLASK3	324291	338422	260442
P23377	P23377	FURIN_RAT	Furin	Furin	1	FPQQWYLSGVTQR	FPQQWYLSGVTQR	2	FPQQWYLSGVTQR2	4543.42	8855.36	628.242
F1MAH6	F1MAH6	F1MAH6_RAT	Cdh11	Cadherin 11	1	FPQSVYQMSVSEAAVPGEEVGR	FPQSVYQMSVSEAAVPGEEVGR	3	FPQSVYQMSVSEAAVPGEEVGR3	19767.4		6604.57
Q923V8	Q923V8	SEP15_RAT	Selenof	Selenoprotein F	1	FPQVQAFVR	FPQVQAFVR	2	FPQVQAFVR2	139673	121347	125901
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	FPQVSNFFEHTPPK	FPQVSNFFEHTPPK	2	FPQVSNFFEHTPPK2	337660	338080	301574
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	FPQVSNFFEHTPPK	FPQVSNFFEHTPPK	3	FPQVSNFFEHTPPK3	1.81655e+06	1.77505e+06	1.95172e+06
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	FPRPMSPLQDVSTIIGSR	FPRPMSPLQDVSTIIGSR	3	FPRPMSPLQDVSTIIGSR3	7614.36	11599.2	3869.91
P97612	P97612	FAAH1_RAT	Faah	Fatty-acid amide hydrolase 1	1	FPSAFCGICGLKPTGNR	FPSAFC(UniMod:4)GIC(UniMod:4)GLKPTGNR	3	FPSAFC(UniMod:4)GIC(UniMod:4)GLKPTGNR3	19509.3	16731.6	7124.37
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	FPSAFFK	FPSAFFK	2	FPSAFFK2	7100.16	5454.81	3771.65
P68182	P68182;P27791	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	0	FPSHFSSDLK	FPSHFSSDLK	2	FPSHFSSDLK2	97223.4	86705.5	54611.1
P68182	P68182;P27791	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	0	FPSHFSSDLK	FPSHFSSDLK	3	FPSHFSSDLK3	546703	476754	426917
P68182	P68182;P27791	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	0	FPSHFSSDLKDLLR	FPSHFSSDLKDLLR	3	FPSHFSSDLKDLLR3	44739.7	59413.2	81334.6
P68182	P68182;P27791	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	0	FPSHFSSDLKDLLR	FPSHFSSDLKDLLR	4	FPSHFSSDLKDLLR4	83014.9	104323	117118
P62907	F1LYQ7;D3Z9F6;A0A8I5Y9H0;P62907;A0A8I5ZVS9	RL10A_RAT	Rpl10a	Large ribosomal subunit protein uL1	0	FPSLLTHNENMVAK	FPSLLTHNENMVAK	3	FPSLLTHNENMVAK3	41567.4	32899.4	34491.8
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	FPSLSEPFSSCCIGSAGHR	FPSLSEPFSSC(UniMod:4)C(UniMod:4)IGSAGHR	3	FPSLSEPFSSC(UniMod:4)C(UniMod:4)IGSAGHR3	252467	293668	263850
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	FPSPEDK	FPSPEDK	2	FPSPEDK2	35245.8	32032.5	43510.1
P10362	P10362	SCG2_RAT	Scg2	Secretogranin-2	1	FPSPEMIR	FPSPEMIR	2	FPSPEMIR2	8715.14	6329.67	
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	FPSPVTVYASIR	FPSPVTVYASIR	2	FPSPVTVYASIR2	4146.75		5066.83
A1L134	A1L134	AUP1_RAT	Aup1	Lipid droplet-regulating VLDL assembly factor AUP1	1	FPSSGLVTPQPTALTFAK	FPSSGLVTPQPTALTFAK	2	FPSSGLVTPQPTALTFAK2	28415	29079.1	17771.5
A1L134	A1L134	AUP1_RAT	Aup1	Lipid droplet-regulating VLDL assembly factor AUP1	1	FPSSGLVTPQPTALTFAK	FPSSGLVTPQPTALTFAK	3	FPSSGLVTPQPTALTFAK3	7640.07	9007.97	5723.64
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	FPSSTFEQVSQLVK	FPSSTFEQVSQLVK	2	FPSSTFEQVSQLVK2	81789.4	41217.1	46883.5
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	FPSSTFEQVSQLVK	FPSSTFEQVSQLVK	3	FPSSTFEQVSQLVK3	19138.1	12464.6	8864.69
P20817	P20817	CP4AE_RAT	Cyp4a14	Cytochrome P450 4A14	1	FPSTPSHWLWGHDLK	FPSTPSHWLWGHDLK	2	FPSTPSHWLWGHDLK2		7391.67	
Q8CIZ5	F1LVL9;Q8CIZ5	DMBT1_RAT	Dmbt1	Deleted in malignant brain tumors 1 protein	0	FPSVYLQCK	FPSVYLQC(UniMod:4)K	2	FPSVYLQC(UniMod:4)K2	661895	786980	595182
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	FPSWVTFEDNEVGCPSPTVPSPK	FPSWVTFEDNEVGC(UniMod:4)PSPTVPSPK	3	FPSWVTFEDNEVGC(UniMod:4)PSPTVPSPK3	36666.7	23905.6	29272.5
D3ZUB7	D3ZUB7	D3ZUB7_RAT	Anapc4	Anaphase-promoting complex subunit 4	1	FPTCFPSFR	FPTC(UniMod:4)FPSFR	2	FPTC(UniMod:4)FPSFR2	10607.2	17036.5	24659.3
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	FPTEGLSSVVR	FPTEGLSSVVR	2	FPTEGLSSVVR2	3447.86		
P21571	P21571	ATP5J_RAT	Atp5pf	ATP synthase-coupling factor 6, mitochondrial	1	FPTFNFEDPK	FPTFNFEDPK	2	FPTFNFEDPK2	22400.4	27072.6	28903.3
Q63691	Q63691	CD14_RAT	Cd14	Monocyte differentiation antigen CD14	1	FPTLQVLALR	FPTLQVLALR	2	FPTLQVLALR2	15073.4	18815.1	13929.1
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	FPVEMTHNHNFR	FPVEMTHNHNFR	2	FPVEMTHNHNFR2	151223	101622	83858.8
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	FPVEMTHNHNFR	FPVEMTHNHNFR	3	FPVEMTHNHNFR3	74889.9	73149.8	45603.7
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	FPVEMTHNHNFR	FPVEMTHNHNFR	4	FPVEMTHNHNFR4	6.36206e+06	6.24667e+06	5.83698e+06
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	FPVFMGR	FPVFMGR	2	FPVFMGR2	4.70428e+06	3.37635e+06	3.26988e+06
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	FPVFNMSYNPAENAVLLCTR	FPVFNMSYNPAENAVLLC(UniMod:4)TR	3	FPVFNMSYNPAENAVLLC(UniMod:4)TR3	51587.3	73231.7	48918.8
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	FPVLILEPTK	FPVLILEPTK	2	FPVLILEPTK2	28467	35015.1	25864.3
Q5XIN4	Q5XIN4	Q5XIN4_RAT	Mtmr9	Myotubularin related protein 9	1	FPVLSYYHK	FPVLSYYHK	2	FPVLSYYHK2	5454.21	10334.6	11473.7
Q5XIN4	Q5XIN4	Q5XIN4_RAT	Mtmr9	Myotubularin related protein 9	1	FPVLSYYHK	FPVLSYYHK	3	FPVLSYYHK3	30437.8	32343.3	27724.1
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	FPVPAFR	FPVPAFR	2	FPVPAFR2	47807.7	53812.7	55700.3
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	FPVVCWR	FPVVC(UniMod:4)WR	2	FPVVC(UniMod:4)WR2	21281.5	22127.7	12267.3
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	FPVVVHSVTPSLR	FPVVVHSVTPSLR	3	FPVVVHSVTPSLR3	18237	19099.1	23910.6
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	FPWMLNMEPYTVAGMAR	FPWMLNMEPYTVAGMAR	3	FPWMLNMEPYTVAGMAR3	4407.12	4562.6	8585.79
D3ZQ80	D3ZQ80	D3ZQ80_RAT	Smg8	Nonsense-mediated mRNA decay factor SMG8	1	FPYAYVTER	FPYAYVTER	2	FPYAYVTER2	19682.6	20362.9	12467.2
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	FQADLQTAVVVANDIK	FQADLQTAVVVANDIK	2	FQADLQTAVVVANDIK2	11206.4	2702.81	4021.55
Q5U2N3	Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	1	FQAIAPLAVPR	FQAIAPLAVPR	2	FQAIAPLAVPR2	15457.6	21287.5	14573.7
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	FQAKDPEEQGDIVVALYPYDGIHPDDLSFK	FQAKDPEEQGDIVVALYPYDGIHPDDLSFK	4	FQAKDPEEQGDIVVALYPYDGIHPDDLSFK4	101852	124460	103080
A0A8I6APP3	A0A8I6APP3	A0A8I6APP3_RAT	Plekho2	Pleckstrin homology domain containing O2	1	FQASSGEEK	FQASSGEEK	2	FQASSGEEK2	73583		98560.6
A0A8I6APP3	A0A8I6APP3	A0A8I6APP3_RAT	Plekho2	Pleckstrin homology domain containing O2	1	FQASSGEEKESWIK	FQASSGEEKESWIK	2	FQASSGEEKESWIK2	6108.64	3123.68	2379.61
A0A8I6APP3	A0A8I6APP3	A0A8I6APP3_RAT	Plekho2	Pleckstrin homology domain containing O2	1	FQASSGEEKESWIK	FQASSGEEKESWIK	3	FQASSGEEKESWIK3	94143.3	134394	133717
Q63678	Q63678	ZA2G_RAT	Azgp1	Zinc-alpha-2-glycoprotein	1	FQATAFLNDQAFFHYNSNSGK	FQATAFLNDQAFFHYNSNSGK	3	FQATAFLNDQAFFHYNSNSGK3	11813.7	13760.6	16389
A0A8I6AC18	A0A8I6AC18	A0A8I6AC18_RAT	Tmem179b	Transmembrane protein 179B	1	FQATPYQPQER	FQATPYQPQER	2	FQATPYQPQER2	6192.14	7880.36	8196.06
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	FQCNPGYK	FQC(UniMod:4)NPGYK	2	FQC(UniMod:4)NPGYK2	32549.4	25760.9	34140.9
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	FQCPPNRPFR	FQC(UniMod:4)PPNRPFR	3	FQC(UniMod:4)PPNRPFR3	576119	754652	594591
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	FQDAPSADGESVAGGVTVATASDK	FQDAPSADGESVAGGVTVATASDK	3	FQDAPSADGESVAGGVTVATASDK3	5905.2	9095.34	6361.46
Q5M936	Q5M936	TOR3A_RAT	Tor3a	Torsin-3A	1	FQDCCSAGNCR	FQDC(UniMod:4)C(UniMod:4)SAGNC(UniMod:4)R	2	FQDC(UniMod:4)C(UniMod:4)SAGNC(UniMod:4)R2		23311.2	
B1WBY5	B1WBY5	B1WBY5_RAT	Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	1	FQDDDQTR	FQDDDQTR	2	FQDDDQTR2	6979.43		8663
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	FQDDLDVR	FQDDLDVR	2	FQDDLDVR2	140896	112071	140368
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	FQDGSNNVMR	FQDGSNNVMR	2	FQDGSNNVMR2	17941.1	13872.4	22212.1
D3ZYR1	D3ZYR1	FCHO2_RAT	Fcho2	F-BAR domain only protein 2	1	FQDIEETHLIHIK	FQDIEETHLIHIK	4	FQDIEETHLIHIK4	2040.49	1747.13	892.318
A0A8I6AJP4	A0A8I6AJP4	A0A8I6AJP4_RAT	Phactr4	Phosphatase and actin regulator 4	1	FQDISQQEDQK	FQDISQQEDQK	2	FQDISQQEDQK2	8933.7	7804.56	14748.1
Q6TUG0	Q6TUG0	DJB11_RAT	Dnajb11	DnaJ homolog subfamily B member 11	1	FQDLGAAYEVLSDSEK	FQDLGAAYEVLSDSEK	2	FQDLGAAYEVLSDSEK2	81892	78051.3	86451.3
Q6TUG0	Q6TUG0	DJB11_RAT	Dnajb11	DnaJ homolog subfamily B member 11	1	FQDLGAAYEVLSDSEK	FQDLGAAYEVLSDSEK	3	FQDLGAAYEVLSDSEK3	40987.8	35756.9	45740
Q6TUG0	Q6TUG0	DJB11_RAT	Dnajb11	DnaJ homolog subfamily B member 11	1	FQDLGAAYEVLSDSEKR	FQDLGAAYEVLSDSEKR	3	FQDLGAAYEVLSDSEKR3	31424.7	17287	23007
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	FQDLISTIK	FQDLISTIK	2	FQDLISTIK2	158401	142175	145268
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	FQDLLDAVWADK	FQDLLDAVWADK	2	FQDLLDAVWADK2	3.57633e+06	3.80997e+06	3.74487e+06
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	FQDLLDAVWADK	FQDLLDAVWADK	3	FQDLLDAVWADK3	62545.3	69608.5	74892.6
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	FQDNFEFVQWFK	FQDNFEFVQWFK	2	FQDNFEFVQWFK2	130244	109534	128289
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	FQDNFEFVQWFK	FQDNFEFVQWFK	3	FQDNFEFVQWFK3	2108.64	1566.07	4828.11
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	FQDNLDFIQWFK	FQDNLDFIQWFK	2	FQDNLDFIQWFK2	225010	262741	261364
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	FQDNLDFIQWFK	FQDNLDFIQWFK	3	FQDNLDFIQWFK3	3085.15	4255.13	3630.53
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	FQDTDGK	FQDTDGK	2	FQDTDGK2			19009.4
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	FQDTDGKELLPK	FQDTDGKELLPK	3	FQDTDGKELLPK3	28844.9	36758.8	31896.2
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	FQDTSQYVCAELQALEQEQGQIDGR	FQDTSQYVC(UniMod:4)AELQALEQEQGQIDGR	3	FQDTSQYVC(UniMod:4)AELQALEQEQGQIDGR3	32054.4	39655.8	31071
D3ZCD0	D3ZCD0	D3ZCD0_RAT	Tek	receptor protein-tyrosine kinase	1	FQDVIGEGNFGQVLK	FQDVIGEGNFGQVLK	2	FQDVIGEGNFGQVLK2	21616.4	14035.9	12906.9
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	FQEAEERPR	FQEAEERPR	2	FQEAEERPR2		3933.86	
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	FQEAEERPR	FQEAEERPR	3	FQEAEERPR3	169991	193900	208125
B2GUY0	B2GUY0	MA1B1_RAT	Man1b1	Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase	1	FQEAVEEVTK	FQEAVEEVTK	2	FQEAVEEVTK2	4481.97	6961.71	6741.5
A0A8I6ASZ5	A0A8I6ASZ5	A0A8I6ASZ5_RAT	Tcf25	Transcription factor 25	1	FQEDQEMAR	FQEDQEMAR	2	FQEDQEMAR2	6194.22	6867.04	5042.43
Q6AXM8	Q6AXM8	PON2_RAT	Pon2	Serum paraoxonase/arylesterase 2	1	FQEEENSLLHLK	FQEEENSLLHLK	2	FQEEENSLLHLK2	2249.95	3994.98	2364.76
Q6AXM8	Q6AXM8	PON2_RAT	Pon2	Serum paraoxonase/arylesterase 2	1	FQEEENSLLHLK	FQEEENSLLHLK	3	FQEEENSLLHLK3	11921.1	15049.4	16487
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	FQEEERSLLHLK	FQEEERSLLHLK	3	FQEEERSLLHLK3	36898.3	37230.7	33918
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	FQEEERSLLHLK	FQEEERSLLHLK	4	FQEEERSLLHLK4	17188.3	21786.7	15436.6
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	FQEFSDIVMPLIK	FQEFSDIVMPLIK	2	FQEFSDIVMPLIK2	3883.65	2623.58	2310.22
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	FQEGQEEER	FQEGQEEER	2	FQEGQEEER2	561471	581550	723781
D4A4T9	D4A4T9	CHRD1_RAT	Chordc1	Cysteine and histidine-rich domain-containing protein 1	1	FQEHIIQAPKPVEAIK	FQEHIIQAPKPVEAIK	4	FQEHIIQAPKPVEAIK4	9462.01	4324.56	7466.23
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	FQEHLQLQNLGINPANIGFSTLTMESDK	FQEHLQLQNLGINPANIGFSTLTMESDK	4	FQEHLQLQNLGINPANIGFSTLTMESDK4	17669.2	21323.1	23571.4
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	FQEITGK	FQEITGK	2	FQEITGK2	35125.1	52525.5	39424.3
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	FQELSQPR	FQELSQPR	2	FQELSQPR2	92867.8	103749	100820
Q5BJU0	Q5BJU0	Q5BJU0_RAT	Rras2	RAS related 2	1	FQEQECPPSPEPTR	FQEQEC(UniMod:4)PPSPEPTR	2	FQEQEC(UniMod:4)PPSPEPTR2	5503.38	3235.2	8379.02
Q5BJU0	Q5BJU0	Q5BJU0_RAT	Rras2	RAS related 2	1	FQEQECPPSPEPTRK	FQEQEC(UniMod:4)PPSPEPTRK	3	FQEQEC(UniMod:4)PPSPEPTRK3	15930.8	17568.2	12074.7
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	FQEQFLNVSGMPQELSQYPCLK	FQEQFLNVSGMPQELSQYPC(UniMod:4)LK	3	FQEQFLNVSGMPQELSQYPC(UniMod:4)LK3	12468.7	28731.8	19659.3
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	FQESEERPK	FQESEERPK	2	FQESEERPK2	264034		142792
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	FQESEERPK	FQESEERPK	3	FQESEERPK3	58803.1		55147.2
Q9WV97	Q9WV97	TIM9_RAT	Timm9	Mitochondrial import inner membrane translocase subunit Tim9	1	FQEYHIQQNEALAAK	FQEYHIQQNEALAAK	3	FQEYHIQQNEALAAK3	13727	15241.5	21979.3
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	FQEYYNK	FQEYYNK	2	FQEYYNK2	132844	133067	129543
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	FQFIGIENIHVMR	FQFIGIENIHVMR	2	FQFIGIENIHVMR2	3941.72		
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	FQFIGIENIHVMR	FQFIGIENIHVMR	3	FQFIGIENIHVMR3	58210.2	72896.2	85814
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	FQFPSHVTDVSEEAK	FQFPSHVTDVSEEAK	2	FQFPSHVTDVSEEAK2	10893	11684.8	10142.7
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	FQFPSHVTDVSEEAK	FQFPSHVTDVSEEAK	3	FQFPSHVTDVSEEAK3	121716	164273	120388
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	FQFPTQVTDVSENAK	FQFPTQVTDVSENAK	2	FQFPTQVTDVSENAK2	40812	34985.6	35492.2
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	FQFPTQVTDVSENAK	FQFPTQVTDVSENAK	3	FQFPTQVTDVSENAK3		5320.3	
D3ZD83	D3ZD83	D3ZD83_RAT	Mfsd10	Major facilitator superfamily domain containing 10	1	FQFSSLQQGK	FQFSSLQQGK	2	FQFSSLQQGK2	16818.2	5228.08	9955.63
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	FQFVACYHELVLECTK	FQFVAC(UniMod:4)YHELVLEC(UniMod:4)TK	3	FQFVAC(UniMod:4)YHELVLEC(UniMod:4)TK3		74520.3	66298.3
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	FQFVACYHELVLECTKK	FQFVAC(UniMod:4)YHELVLEC(UniMod:4)TKK	4	FQFVAC(UniMod:4)YHELVLEC(UniMod:4)TKK4	12164.4	10151.5	7592.01
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	FQGEDTVMIASK	FQGEDTVMIASK	2	FQGEDTVMIASK2	25864.7	23974.6	26592.8
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	FQGEDTVMIASKPYAFDR	FQGEDTVMIASKPYAFDR	3	FQGEDTVMIASKPYAFDR3	100169	128371	96913.8
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	FQGFHVAEER	FQGFHVAEER	3	FQGFHVAEER3	19673.1	16171.4	9711.3
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	FQGILPSSGSEDFLWK	FQGILPSSGSEDFLWK	2	FQGILPSSGSEDFLWK2	12396.9	6451.86	10521.5
O70595	O70595	ABCB6_RAT	Abcb6	ATP-binding cassette sub-family B member 6	1	FQGLEWK	FQGLEWK	2	FQGLEWK2	10139.9	12732.6	12614.4
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	FQGMISELR	FQGMISELR	2	FQGMISELR2	22391.9	26153.8	20616.4
Q920J4	Q920J4	TXNL1_RAT	Txnl1	Thioredoxin-like protein 1	1	FQGPDNGQGPK	FQGPDNGQGPK	2	FQGPDNGQGPK2	206092	220265	206195
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	FQGPTCETCQTCLGVCAEHK	FQGPTC(UniMod:4)ETC(UniMod:4)QTC(UniMod:4)LGVC(UniMod:4)AEHK	3	FQGPTC(UniMod:4)ETC(UniMod:4)QTC(UniMod:4)LGVC(UniMod:4)AEHK3	382621	350926	413719
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	FQGPVLLVR	FQGPVLLVR	2	FQGPVLLVR2	297792	298579	324353
P97532	P97532	THTM_RAT	Mpst	3-mercaptopyruvate sulfurtransferase	1	FQGTQPEPR	FQGTQPEPR	2	FQGTQPEPR2	82375.4	79392.2	87663.1
P33436	P33436	MMP2_RAT	Mmp2	72 kDa type IV collagenase	1	FQGTSYNSCTTEGR	FQGTSYNSC(UniMod:4)TTEGR	2	FQGTSYNSC(UniMod:4)TTEGR2	4506.82	2363.28	7805.51
Q62656	Q62656	PTPRZ_RAT	Ptprz1	Receptor-type tyrosine-protein phosphatase zeta	1	FQGWEKPSLENTFIHNTGK	FQGWEKPSLENTFIHNTGK	3	FQGWEKPSLENTFIHNTGK3	21957.6	35074.5	15607.2
Q62656	Q62656	PTPRZ_RAT	Ptprz1	Receptor-type tyrosine-protein phosphatase zeta	1	FQGWEKPSLENTFIHNTGK	FQGWEKPSLENTFIHNTGK	4	FQGWEKPSLENTFIHNTGK4	49521.4	74724.2	55801.2
P28075	P28075	PSB5_RAT	Psmb5	Proteasome subunit beta type-5	1	FQHGVIVAADSR	FQHGVIVAADSR	2	FQHGVIVAADSR2	129380	105988	118981
P28075	P28075	PSB5_RAT	Psmb5	Proteasome subunit beta type-5	1	FQHGVIVAADSR	FQHGVIVAADSR	3	FQHGVIVAADSR3	90665.9	107459	119731
P28064	P28064	PSB8_RAT	Psmb8	Proteasome subunit beta type-8	1	FQHGVIVAVDSR	FQHGVIVAVDSR	2	FQHGVIVAVDSR2	81933.3	70611.8	92314.6
P28064	P28064	PSB8_RAT	Psmb8	Proteasome subunit beta type-8	1	FQHGVIVAVDSR	FQHGVIVAVDSR	3	FQHGVIVAVDSR3	1.00921e+06	877756	1.05736e+06
Q4KLH3	Q4KLH3	OGRL1_RAT	Ogfrl1	Opioid growth factor receptor-like protein 1	1	FQHLNESQHNYLR	FQHLNESQHNYLR	3	FQHLNESQHNYLR3	12718.3	26849.1	11412
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	FQHPSHELLK	FQHPSHELLK	3	FQHPSHELLK3	11533.1	7344.87	1475.87
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	FQHPSTMHILQPMDIHVELAK	FQHPSTMHILQPMDIHVELAK	4	FQHPSTMHILQPMDIHVELAK4	7875.68	6912.73	4931.35
D4A9Y0	D4A9Y0	D4A9Y0_RAT	Sdf2l1	Stromal cell-derived factor 2-like 1	1	FQHVGTSVFLSVTGEQYGNPIR	FQHVGTSVFLSVTGEQYGNPIR	3	FQHVGTSVFLSVTGEQYGNPIR3	55308.2	37243.8	54180
Q5BK32	Q5BK32	FAF2_RAT	Faf2	FAS-associated factor 2	1	FQIEANFPR	FQIEANFPR	2	FQIEANFPR2	85149.9	76464.8	86208.5
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	FQILNDEIITILDK	FQILNDEIITILDK	2	FQILNDEIITILDK2	20123.3	29188.5	33159.7
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	FQILNDEIITILDK	FQILNDEIITILDK	3	FQILNDEIITILDK3	3940.18		4173.03
Q62844	Q62844	FYN_RAT	Fyn	Tyrosine-protein kinase Fyn	1	FQILNSSEGDWWEAR	FQILNSSEGDWWEAR	2	FQILNSSEGDWWEAR2	7391.8	12525.1	7054.62
P27615	P27615	SCRB2_RAT	Scarb2	Lysosome membrane protein 2	1	FQINTYVK	FQINTYVK	2	FQINTYVK2	10572.5	6557.65	7627.21
G3V6S0	Q9QWN8;G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	0	FQIQDISVETEDNK	FQIQDISVETEDNK	2	FQIQDISVETEDNK2	2625.25	7588.79	9113.3
G3V6S0	Q9QWN8;G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	0	FQIQDISVETEDNKEK	FQIQDISVETEDNKEK	2	FQIQDISVETEDNKEK2	1695.57		3228.49
G3V6S0	Q9QWN8;G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	0	FQIQDISVETEDNKEK	FQIQDISVETEDNKEK	3	FQIQDISVETEDNKEK3	46539.2	41438.6	46849.8
G3V6S0	Q9QWN8;G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	0	FQIQDISVETEDNKEKK	FQIQDISVETEDNKEKK	4	FQIQDISVETEDNKEKK4	18107.1	20434.4	29699.2
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	FQIQDIVVQTQEGR	FQIQDIVVQTQEGR	2	FQIQDIVVQTQEGR2	5970.11	3421.62	1545.57
O35217	O35217	MINP1_RAT	Minpp1	Multiple inositol polyphosphate phosphatase 1	1	FQIQMLLNEK	FQIQMLLNEK	2	FQIQMLLNEK2	27696.8	20400.8	22334.7
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	FQIQPPEMIIEGNQLHIK	FQIQPPEMIIEGNQLHIK	3	FQIQPPEMIIEGNQLHIK3	62698.2	45790.1	32275.2
Q3MIB4	Q3MIB4	LONP2_RAT	Lonp2	Lon protease homolog 2, peroxisomal	1	FQIVQVLK	FQIVQVLK	2	FQIVQVLK2	1175.01		3597.82
P01883	P01883	IGHD_RAT		Ig delta chain C region (Fragment)	1	FQIWSVLR	FQIWSVLR	2	FQIWSVLR2	14380.3	22166.5	
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	FQLEISSNPEEQR	FQLEISSNPEEQR	2	FQLEISSNPEEQR2	7582.56	5328.92	8515.18
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	FQLFQKPANFEQR	FQLFQKPANFEQR	2	FQLFQKPANFEQR2	22599.9	25767.8	22509.1
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	FQLFQKPANFEQR	FQLFQKPANFEQR	3	FQLFQKPANFEQR3	230983	280648	311837
P50398	P50398	GDIA_RAT	Gdi1	Rab GDP dissociation inhibitor alpha	1	FQLLEGPPESMGR	FQLLEGPPESMGR	2	FQLLEGPPESMGR2	91265.8	82575.6	89555.6
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	FQLPISSHCHPSR	FQLPISSHC(UniMod:4)HPSR	4	FQLPISSHC(UniMod:4)HPSR4	6501.08	6261.2	6969.65
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	FQLQLLR	FQLQLLR	2	FQLQLLR2	118655	125970	121869
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	FQLSAEIMDHQNR	FQLSAEIMDHQNR	2	FQLSAEIMDHQNR2	7140.48	9838.12	2940.68
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	FQLSAEIMDHQNR	FQLSAEIMDHQNR	3	FQLSAEIMDHQNR3	98047.4	142628	118398
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	FQLSNSGPNSTLK	FQLSNSGPNSTLK	2	FQLSNSGPNSTLK2	60654.8	55827.9	52323.5
Q68FP9	Q68FP9	COG6_RAT	Cog6	Conserved oligomeric Golgi complex subunit 6	1	FQLTSDEMTLLR	FQLTSDEMTLLR	2	FQLTSDEMTLLR2	25473.8	30326.6	18888
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	FQMHVLLNEMK	FQMHVLLNEMK	2	FQMHVLLNEMK2	10350	3556.28	6799.15
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	FQMHVLLNEMK	FQMHVLLNEMK	3	FQMHVLLNEMK3	49270.5	50332.2	48723.6
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	FQMIPLDPK	FQMIPLDPK	2	FQMIPLDPK2	3.52102e+07	3.69552e+07	3.82695e+07
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	FQMIPLDPKGTSQNDPNWVVR	FQMIPLDPKGTSQNDPNWVVR	3	FQMIPLDPKGTSQNDPNWVVR3	50353.2	67592.3	56090.6
P47942	P47942	DPYL2_RAT	Dpysl2	Dihydropyrimidinase-related protein 2	1	FQMPDQGMTSADDFFQGTK	FQMPDQGMTSADDFFQGTK	3	FQMPDQGMTSADDFFQGTK3	8936.11	2539.46	6961.96
Q4FZT2	Q4FZT2	PPME1_RAT	Ppme1	Protein phosphatase methylesterase 1	1	FQMQVLPQCGHAVHEDAPDK	FQMQVLPQC(UniMod:4)GHAVHEDAPDK	3	FQMQVLPQC(UniMod:4)GHAVHEDAPDK3	3628.85		
Q4FZT2	Q4FZT2	PPME1_RAT	Ppme1	Protein phosphatase methylesterase 1	1	FQMQVLPQCGHAVHEDAPDK	FQMQVLPQC(UniMod:4)GHAVHEDAPDK	4	FQMQVLPQC(UniMod:4)GHAVHEDAPDK4	28580.4	17861.9	11471.1
Q6TUG0	Q6TUG0	DJB11_RAT	Dnajb11	DnaJ homolog subfamily B member 11	1	FQMTQEVVCDECPNVK	FQMTQEVVC(UniMod:4)DEC(UniMod:4)PNVK	3	FQMTQEVVC(UniMod:4)DEC(UniMod:4)PNVK3	27430.9	30959.2	40257.7
A0A0G2JZH0	A0A0G2JZH0	A0A0G2JZH0_RAT	Cab39	Calcium binding protein 39	1	FQNDRTEDEQFNDEK	FQNDRTEDEQFNDEK	3	FQNDRTEDEQFNDEK3	31987.6	33505.5	39379.5
A0A8I6G5Q1	A0A8I6G5Q1	A0A8I6G5Q1_RAT	Sema4d	Semaphorin 4D	1	FQNGELK	FQNGELK	2	FQNGELK2	11046.2	12370.9	14107.6
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	FQNIVVEILIEHFGK	FQNIVVEILIEHFGK	3	FQNIVVEILIEHFGK3		2270.74	3299.22
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	FQNIVVEILIENHEK	FQNIVVEILIENHEK	3	FQNIVVEILIENHEK3	9505.71	11596.1	8084.97
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	FQNLDKK	FQNLDKK	2	FQNLDKK2	42264.9	18781.9	31208.1
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	FQNPQAEGVNAVEDEIK	FQNPQAEGVNAVEDEIK	2	FQNPQAEGVNAVEDEIK2	4323.84	2448.89	4838.49
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	FQNPQAEGVNAVEDEIK	FQNPQAEGVNAVEDEIK	3	FQNPQAEGVNAVEDEIK3	8208.61	5642.47	5497.79
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	FQNPQAEGVNAVEDEIKK	FQNPQAEGVNAVEDEIKK	3	FQNPQAEGVNAVEDEIKK3	87085.7	89310.1	93019
P08650	P08650	CO5_RAT	C5	Complement C5	1	FQNSALLTLPPK	FQNSALLTLPPK	2	FQNSALLTLPPK2	262378	168340	185303
Q920J4	Q920J4	TXNL1_RAT	Txnl1	Thioredoxin-like protein 1	1	FQNVNSVTLFVQSNQGEEETTR	FQNVNSVTLFVQSNQGEEETTR	3	FQNVNSVTLFVQSNQGEEETTR3	13954.8	15708.4	5183.99
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	FQPENTKK	FQPENTKK	2	FQPENTKK2			3873.27
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	FQPGETLTEILETPATNEQEAEHQR	FQPGETLTEILETPATNEQEAEHQR	3	FQPGETLTEILETPATNEQEAEHQR3	41169.8	73103.3	47844
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	FQPLLDGLK	FQPLLDGLK	2	FQPLLDGLK2	303908	310125	284669
Q9ES53	Q9ES53	UFD1_RAT	Ufd1	Ubiquitin recognition factor in ER-associated degradation protein 1	1	FQPQSPDFLDITNPK	FQPQSPDFLDITNPK	2	FQPQSPDFLDITNPK2	15603.2	12417.5	27147
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	FQPTYVMMPR	FQPTYVMMPR	2	FQPTYVMMPR2	2.42158e+07	1.91572e+07	1.77603e+07
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	FQPTYVMMPR	FQPTYVMMPR	3	FQPTYVMMPR3	542019	414333	435573
Q3B7V5	Q3B7V5	Q3B7V5_RAT	Rab2b	RAB2B, member RAS oncogene family	1	FQPVHDLTIGVEFGAR	FQPVHDLTIGVEFGAR	2	FQPVHDLTIGVEFGAR2	9901.32	11835.9	10387
Q3B7V5	Q3B7V5	Q3B7V5_RAT	Rab2b	RAB2B, member RAS oncogene family	1	FQPVHDLTIGVEFGAR	FQPVHDLTIGVEFGAR	3	FQPVHDLTIGVEFGAR3	48536.5	41198.4	49082.4
F1M784	F1M784	F1M784_RAT	Pik3ap1	Phosphoinositide-3-kinase adaptor protein 1	1	FQQENLK	FQQENLK	2	FQQENLK2	13707.5	13068	7943.38
D4A7N1	D4A7N1	MIC25_RAT	Chchd6	MICOS complex subunit Mic25	1	FQQEQLAVQDELVK	FQQEQLAVQDELVK	2	FQQEQLAVQDELVK2	15715	9594.31	8925.94
D4A7N1	D4A7N1	MIC25_RAT	Chchd6	MICOS complex subunit Mic25	1	FQQEQLAVQDELVK	FQQEQLAVQDELVK	3	FQQEQLAVQDELVK3	6828.86		
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	FQQGIAPSGPAGELK	FQQGIAPSGPAGELK	2	FQQGIAPSGPAGELK2	13132.7	17542.8	11562.7
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	FQQHIQAQQK	FQQHIQAQQK	3	FQQHIQAQQK3	9572.47	5221.06	9383.97
O08773	O08773	RGS14_RAT	Rgs14	Regulator of G-protein signaling 14	1	FQQIPASDTK	FQQIPASDTK	2	FQQIPASDTK2	35040.5	45664.4	37294.4
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	FQQLHGR	FQQLHGR	2	FQQLHGR2		18622.2	
G3V904	G3V904	G3V904_RAT	Pld4	Phospholipase D family, member 4	1	FQQLLLR	FQQLLLR	2	FQQLLLR2	12840.1	9371.2	12584.4
Q9WVA1	Q9WVA1	TIM8A_RAT	Timm8a	Mitochondrial import inner membrane translocase subunit Tim8 A	1	FQQLVHQMTELCWEK	FQQLVHQMTELC(UniMod:4)WEK	3	FQQLVHQMTELC(UniMod:4)WEK3	8293.84	5508.81	12282.9
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	FQQQILAQQK	FQQQILAQQK	2	FQQQILAQQK2	35140.2	29063.6	27250.5
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	FQRDTYDFDIAMLR	FQRDTYDFDIAMLR	3	FQRDTYDFDIAMLR3	85314.5	86727.6	122039
Q4FZV0	Q4FZV0	MANBA_RAT	Manba	Beta-mannosidase	1	FQSAVQYAECQSK	FQSAVQYAEC(UniMod:4)QSK	2	FQSAVQYAEC(UniMod:4)QSK2	25800.3	23400.2	23226.9
M0R8J3	M0R8J3	M0R8J3_RAT	Jmy	Junction mediating and regulatory protein, p53 cofactor	1	FQSEDEYR	FQSEDEYR	2	FQSEDEYR2	10138.7		7533.01
P84817	P84817	FIS1_RAT	Fis1	Mitochondrial fission 1 protein	1	FQSEQAAGSVSK	FQSEQAAGSVSK	2	FQSEQAAGSVSK2	139440	123078	148675
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	FQSFIESCLVK	FQSFIESC(UniMod:4)LVK	2	FQSFIESC(UniMod:4)LVK2	172367	183959	187009
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	FQSGDFHVINGVLR	FQSGDFHVINGVLR	3	FQSGDFHVINGVLR3	19288.7	7296.85	8571.73
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	FQSIGVQVEDDWR	FQSIGVQVEDDWR	2	FQSIGVQVEDDWR2	24073.8	20444.9	12312.2
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	FQSISTEFLALMK	FQSISTEFLALMK	2	FQSISTEFLALMK2	107318	84123.9	138022
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	FQSISTEFLALMK	FQSISTEFLALMK	3	FQSISTEFLALMK3	4648.16	2111.07	2850.51
P09527	P09527	RAB7A_RAT	Rab7a	Ras-related protein Rab-7a	1	FQSLGVAFYR	FQSLGVAFYR	2	FQSLGVAFYR2	136193	144615	174177
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	FQSLSCSLAER	FQSLSC(UniMod:4)SLAER	2	FQSLSC(UniMod:4)SLAER2	69307	73200.9	74359.1
G3V619	G3V619	G3V619_RAT	Ascc1	Activating signal cointegrator 1 complex subunit 1	1	FQSMGLVMK	FQSMGLVMK	2	FQSMGLVMK2	20388.1	24217.9	28247.4
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	FQSPGTQSSR	FQSPGTQSSR	2	FQSPGTQSSR2	22919.5	20499.2	11339.4
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	FQSPGTQSSRPIK	FQSPGTQSSRPIK	3	FQSPGTQSSRPIK3	42330.4	52767.4	66834.8
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	FQSSHHSTDITSLDQYVER	FQSSHHSTDITSLDQYVER	3	FQSSHHSTDITSLDQYVER3	1.04735e+06	1.18284e+06	1.04721e+06
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	FQSSHHSTDITSLDQYVER	FQSSHHSTDITSLDQYVER	4	FQSSHHSTDITSLDQYVER4	3.15275e+06	3.57122e+06	3.46361e+06
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	FQSTDVAEEVYTR	FQSTDVAEEVYTR	2	FQSTDVAEEVYTR2	48854.3	35340.3	43189.6
P97521	P97521	MCAT_RAT	Slc25a20	Mitochondrial carnitine/acylcarnitine carrier protein	1	FQTAPPGK	FQTAPPGK	2	FQTAPPGK2	128186	100704	110172
P97521	P97521	MCAT_RAT	Slc25a20	Mitochondrial carnitine/acylcarnitine carrier protein	1	FQTAPPGKYPNGFR	FQTAPPGKYPNGFR	3	FQTAPPGKYPNGFR3	29766	51778.6	42476.3
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	FQTEIQTVNK	FQTEIQTVNK	2	FQTEIQTVNK2	21938.6	37012.7	23615.6
Q63663	Q63663	GBP2_RAT	Gbp2	Guanylate-binding protein 2	1	FQTELGNLLISK	FQTELGNLLISK	2	FQTELGNLLISK2	23516.5	17285.4	26172.9
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	FQTFVQDAESNPLCR	FQTFVQDAESNPLC(UniMod:4)R	2	FQTFVQDAESNPLC(UniMod:4)R2	34807.8	42325.2	27679.5
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	FQTFVQDAESNPLCR	FQTFVQDAESNPLC(UniMod:4)R	3	FQTFVQDAESNPLC(UniMod:4)R3	47235.6	62062.7	68206.2
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	FQTGFEILK	FQTGFEILK	2	FQTGFEILK2	29979.8	26349.6	22219.4
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	FQTLINDLDK	FQTLINDLDK	2	FQTLINDLDK2	169044	166734	189520
P21531	P21531	RL3_RAT	Rpl3	Large ribosomal subunit protein uL3	1	FQTMEEK	FQTMEEK	2	FQTMEEK2	36391.7	80572	25625.5
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	FQTQQLLEMCK	FQTQQLLEMC(UniMod:4)K	2	FQTQQLLEMC(UniMod:4)K2	36293.8	32781.6	23593.2
Q9JHW5	Q9JHW5	VAMP7_RAT	Vamp7	Vesicle-associated membrane protein 7	1	FQTTYGSR	FQTTYGSR	2	FQTTYGSR2	107444	84523.6	128817
F1MA46	F1MA46	F1MA46_RAT	Pcdh12	Protocadherin 12	1	FQVAEEVPSGTVIGK	FQVAEEVPSGTVIGK	2	FQVAEEVPSGTVIGK2	171191	186694	182844
F1MA46	F1MA46	F1MA46_RAT	Pcdh12	Protocadherin 12	1	FQVAEEVPSGTVIGK	FQVAEEVPSGTVIGK	3	FQVAEEVPSGTVIGK3	16337.3	25683.1	14142
P34067	P34067	PSB4_RAT	Psmb4	Proteasome subunit beta type-4	1	FQVATVTEK	FQVATVTEK	2	FQVATVTEK2	3.80863e+06	4.4576e+06	4.77209e+06
P00770	P00770	MCPT2_RAT	Mcpt2	Mast cell protease 2	1	FQVCVGSPTTLR	FQVC(UniMod:4)VGSPTTLR	2	FQVC(UniMod:4)VGSPTTLR2	2986.32	1387.64	3688.6
P14046	Q6IE52;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	FQVDKSNR	FQVDKSNR	2	FQVDKSNR2	234457	172885	195510
Q03626	A0A8I6AG69;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	FQVDNSNR	FQVDNSNR	1	FQVDNSNR1	36075.6	45841.1	31527.4
Q03626	A0A8I6AG69;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	FQVDNSNR	FQVDNSNR	2	FQVDNSNR2	9.02736e+06	6.7157e+06	6.79802e+06
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	FQVDPVSENAGR	FQVDPVSENAGR	2	FQVDPVSENAGR2	67615	62210.8	56397.3
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	FQVEQIGENK	FQVEQIGENK	2	FQVEQIGENK2	13993.6	20953.8	15013.1
F1LYX9	F1LYX9	F1LYX9_RAT	Dsg2	Desmoglein 2	1	FQVFDEDTGK	FQVFDEDTGK	2	FQVFDEDTGK2	168234	100870	113835
Q66H86	Q66H86	OLFL1_RAT	Olfml1	Olfactomedin-like protein 1	1	FQVLEQGLEK	FQVLEQGLEK	2	FQVLEQGLEK2	79156.5	77913.4	79391.3
Q5M887	Q5M887	TPC13_RAT	Trappc13	Trafficking protein particle complex subunit 13	1	FQVLKPLDVK	FQVLKPLDVK	2	FQVLKPLDVK2	4012.07	4390.6	
Q5M887	Q5M887	TPC13_RAT	Trappc13	Trafficking protein particle complex subunit 13	1	FQVLKPLDVK	FQVLKPLDVK	3	FQVLKPLDVK3	7716.64	2799.25	4242.74
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	FQVLQDNCK	FQVLQDNC(UniMod:4)K	2	FQVLQDNC(UniMod:4)K2	8331.2	12359.1	12441.9
D3ZES2	D3ZES2	D3ZES2_RAT	Trappc6b	Trafficking protein particle complex subunit 6B	1	FQVMIQK	FQVMIQK	2	FQVMIQK2	37792.7	34994.5	45376.1
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	FQVNNLGQR	FQVNNLGQR	2	FQVNNLGQR2	105770	83358.1	80481
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	FQVNNNNQLLLQR	FQVNNNNQLLLQR	2	FQVNNNNQLLLQR2	3624.18	2238.94	2042.86
A0A8I6AD03	A0A8I6AD03	A0A8I6AD03_RAT	Aplp1	Amyloid beta precursor like protein 1	1	FQVQTHLQVVQER	FQVQTHLQVVQER	3	FQVQTHLQVVQER3	15500.6	24508.7	28270.1
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	FQVSVTMDDAQK	FQVSVTMDDAQK	2	FQVSVTMDDAQK2	10078.4	3441.53	8704.62
Q75Q40	Q75Q40	TOM40_RAT	Tomm40	Mitochondrial import receptor subunit TOM40 homolog	1	FQVTHTVALGTIGESNYHFGVTYVGTK	FQVTHTVALGTIGESNYHFGVTYVGTK	4	FQVTHTVALGTIGESNYHFGVTYVGTK4	8659.55	16267.9	10109
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	FQVTTTANK	FQVTTTANK	2	FQVTTTANK2	32889.9	38913.1	37398.8
P97532	P97532	THTM_RAT	Mpst	3-mercaptopyruvate sulfurtransferase	1	FQVVDAR	FQVVDAR	2	FQVVDAR2	67495.8	60064.2	56143.1
P61212	P61212	ARL1_RAT	Arl1	ADP-ribosylation factor-like protein 1	1	FQVWDLGGQTSIR	FQVWDLGGQTSIR	2	FQVWDLGGQTSIR2	13776.1	11614.1	10131.9
P61212	P61212	ARL1_RAT	Arl1	ADP-ribosylation factor-like protein 1	1	FQVWDLGGQTSIRPYWR	FQVWDLGGQTSIRPYWR	3	FQVWDLGGQTSIRPYWR3	80802.6	74962.6	89898.9
Q641X8	Q641X8;A0A0G2K273	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	0	FQYECGNYSGAAEYLYFFR	FQYEC(UniMod:4)GNYSGAAEYLYFFR	3	FQYEC(UniMod:4)GNYSGAAEYLYFFR3	11597.1	7263.88	13752.9
F1M332	F1M332	F1M332_RAT	Arhgap28	Rho GTPase activating protein 28	1	FQYENSHASSDR	FQYENSHASSDR	2	FQYENSHASSDR2		7634.22	4657.76
F1M332	F1M332	F1M332_RAT	Arhgap28	Rho GTPase activating protein 28	1	FQYENSHASSDR	FQYENSHASSDR	3	FQYENSHASSDR3	16709.8	19452.7	17579.3
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	FQYILNPR	FQYILNPR	2	FQYILNPR2	47581.3	40196.7	31057.3
P49621	P49621	DGKB_RAT	Dgkb	Diacylglycerol kinase beta	1	FQYLLNPR	FQYLLNPR	2	FQYLLNPR2	48034		
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	FQYYEDSSGR	FQYYEDSSGR	2	FQYYEDSSGR2	22607.5	5.06301e+06	29845.7
P85515	P85515	ACTZ_RAT	Actr1a	Alpha-centractin	1	FRAPELLFRPDLIGEESEGIHEVLVFAIQK	FRAPELLFRPDLIGEESEGIHEVLVFAIQK	4	FRAPELLFRPDLIGEESEGIHEVLVFAIQK4	7334.37	7179.46	5642.56
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	FRCEDGEMFSK	FRC(UniMod:4)EDGEMFSK	2	FRC(UniMod:4)EDGEMFSK2	2959.3		2583.69
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	FRCEDGEMFSK	FRC(UniMod:4)EDGEMFSK	3	FRC(UniMod:4)EDGEMFSK3	16523.3	22226.9	27097.2
P60711	P60711;P63259;A0A8I5Y704	ACTB_RAT	Actb	Actin, cytoplasmic 1	0	FRCPEALFQPSFLGMESCGIHETTFNSIMK	FRC(UniMod:4)PEALFQPSFLGMESC(UniMod:4)GIHETTFNSIMK	4	FRC(UniMod:4)PEALFQPSFLGMESC(UniMod:4)GIHETTFNSIMK4	207996	283826	333781
G3V6K6	G3V6K6	G3V6K6_RAT	Egfr	Receptor protein-tyrosine kinase	1	FRDEATCK	FRDEATC(UniMod:4)K	2	FRDEATC(UniMod:4)K2			3184.54
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	FRDEFVIPHLHK	FRDEFVIPHLHK	3	FRDEFVIPHLHK3	30778.8	28872.2	23892.6
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	FRDEFVIPHLHK	FRDEFVIPHLHK	4	FRDEFVIPHLHK4	89493	114590	89705.3
Q04631	Q04631	FNTA_RAT	Fnta	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha	1	FRDVYDYFR	FRDVYDYFR	3	FRDVYDYFR3	26019.9	21673.5	35237
P15384	P15384	KCNA3_RAT	Kcna3	Potassium voltage-gated channel subfamily A member 3	1	FREDEGFLR	FREDEGFLR	2	FREDEGFLR2	6294.69	1397.66	
P15384	P15384	KCNA3_RAT	Kcna3	Potassium voltage-gated channel subfamily A member 3	1	FREDEGFLR	FREDEGFLR	3	FREDEGFLR3	97120.4	92476.3	113836
P25977	P25977	UBF1_RAT	Ubtf	Nucleolar transcription factor 1	1	FREDHPDLIQNAK	FREDHPDLIQNAK	4	FREDHPDLIQNAK4	23376.7		
Q78EG7	Q78EG7	TP4A1_RAT	Ptp4a1	Protein tyrosine phosphatase type IVA 1	1	FREEPGCCIAVHCVAGLGR	FREEPGC(UniMod:4)C(UniMod:4)IAVHC(UniMod:4)VAGLGR	4	FREEPGC(UniMod:4)C(UniMod:4)IAVHC(UniMod:4)VAGLGR4	44284.8	27787.2	
Q6P9X4	Q6P9X4	TP4A2_RAT	Ptp4a2	Protein tyrosine phosphatase type IVA 2	1	FREEPGCCVAVHCVAGLGR	FREEPGC(UniMod:4)C(UniMod:4)VAVHC(UniMod:4)VAGLGR	4	FREEPGC(UniMod:4)C(UniMod:4)VAVHC(UniMod:4)VAGLGR4	7971.57	10200.9	5716.99
D4A0Z1	D4A0Z1	D4A0Z1_RAT	Tspan14	Tetraspanin	1	FREFFESNIR	FREFFESNIR	3	FREFFESNIR3	12993	8462.89	11653.3
Q62848	Q62848	ARFG1_RAT	Arfgap1	ADP-ribosylation factor GTPase-activating protein 1	1	FREFLEAQDDYEPSWSLQDK	FREFLEAQDDYEPSWSLQDK	3	FREFLEAQDDYEPSWSLQDK3	61082.8	54933	55770.7
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	FRELLLYGR	FRELLLYGR	3	FRELLLYGR3	4727.84	7111.13	11009
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	FRENLIYTYIGPVLVSVNPYR	FRENLIYTYIGPVLVSVNPYR	3	FRENLIYTYIGPVLVSVNPYR3	14700.9	30802.6	10590.8
D3ZRB3	D3ZRB3	D3ZRB3_RAT	Rhof	Ras homolog family member F, filopodia associated	1	FRENVEDVFR	FRENVEDVFR	3	FRENVEDVFR3	176981	190421	176631
Q99MS0	Q99MS0;Q9Z1J8	S14L2_RAT	Sec14l2	SEC14-like protein 2	0	FRENVQDVLPALPNPDDYFLLR	FRENVQDVLPALPNPDDYFLLR	3	FRENVQDVLPALPNPDDYFLLR3	9404.41	13512.3	11998.2
P31044	P31044	PEBP1_RAT	Pebp1	Phosphatidylethanolamine-binding protein 1	1	FREWHHFLVVNMK	FREWHHFLVVNMK	4	FREWHHFLVVNMK4	7187.57	7779.47	10176.9
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	FRFEACPETQVPLQLESK	FRFEAC(UniMod:4)PETQVPLQLESK	3	FRFEAC(UniMod:4)PETQVPLQLESK3	146920	137870	141434
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	FRFPHVDLVVQR	FRFPHVDLVVQR	3	FRFPHVDLVVQR3	18467.2	22231.6	13308.7
A0A8I6AL00	A0A8I6AL00	A0A8I6AL00_RAT	Ndufs8	NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial	1	FRGEHALR	FRGEHALR	2	FRGEHALR2	7105.15		
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	FRGLEEGQAQAGQCPSLEGR	FRGLEEGQAQAGQC(UniMod:4)PSLEGR	3	FRGLEEGQAQAGQC(UniMod:4)PSLEGR3	31972	46821.1	44613
Q9Z269	Q9Z269	VAPB_RAT	Vapb	Vesicle-associated membrane protein-associated protein B	1	FRGPFTDVVTTNLK	FRGPFTDVVTTNLK	3	FRGPFTDVVTTNLK3	85362	87301.4	99222.9
A0A8I6G9X6	A0A8I6G9X6	A0A8I6G9X6_RAT	Kntc1	Kinetochore associated 1	1	FRGPPGPTPAMGTNASVK	FRGPPGPTPAMGTNASVK	3	FRGPPGPTPAMGTNASVK3	5175.54	7969.73	733.242
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	FRHENIIGINDIIR	FRHENIIGINDIIR	3	FRHENIIGINDIIR3	138372	137864	127554
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	FRHENIIGINDIIR	FRHENIIGINDIIR	4	FRHENIIGINDIIR4	49143.5	56200.3	42703.5
P21708	A0A8I6GKL7;P21708	MK03_RAT	Mapk3	Mitogen-activated protein kinase 3	0	FRHENVIGIR	FRHENVIGIR	3	FRHENVIGIR3	13921.9	13297.9	7712.74
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	FRIDFSDIMVLGDINTKPK	FRIDFSDIMVLGDINTKPK	3	FRIDFSDIMVLGDINTKPK3	6689.9	3565.27	7872.99
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	FRIDFSDIMVLGDINTKPK	FRIDFSDIMVLGDINTKPK	4	FRIDFSDIMVLGDINTKPK4	16562.5	12577	12797.6
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	FRIEDSFSLK	FRIEDSFSLK	2	FRIEDSFSLK2	22880.2	36785.4	32039.3
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	FRIEDSFSLK	FRIEDSFSLK	3	FRIEDSFSLK3	220784	176776	180714
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	FRIPYLGVYIFK	FRIPYLGVYIFK	3	FRIPYLGVYIFK3	667.571	2683.5	1594.35
B5DEN9	B5DEN9	VPS28_RAT	Vps28	Vacuolar protein sorting-associated protein 28 homolog	1	FRLDCPLAMER	FRLDC(UniMod:4)PLAMER	3	FRLDC(UniMod:4)PLAMER3	45484	64993.4	63132.4
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	FRLDPATGALYTSEK	FRLDPATGALYTSEK	3	FRLDPATGALYTSEK3	25605.6	33983.4	25302.5
P40112	A0A8I5ZRG0;P40112;A0A8I6A926;D3Z8J0	PSB3_RAT	Psmb3	Proteasome subunit beta type-3	0	FRLNLYELK	FRLNLYELK	2	FRLNLYELK2	7111.3	12252.9	17688.8
P40112	A0A8I5ZRG0;P40112;A0A8I6A926;D3Z8J0	PSB3_RAT	Psmb3	Proteasome subunit beta type-3	0	FRLNLYELK	FRLNLYELK	3	FRLNLYELK3	95573.9	111073	111614
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	FRLPDITR	FRLPDITR	2	FRLPDITR2	143949	167585	131684
Q6PCU8	Q6PCU8	NDUV3_RAT	Ndufv3	NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial	1	FRLPQPSSGR	FRLPQPSSGR	3	FRLPQPSSGR3	35654.2	28364.9	31767.9
P62856	D3Z8D7;P62856;A0A0G2JY64;A0A0G2K743	RS26_RAT	Rps26	Small ribosomal subunit protein eS26	0	FRPAGAAPRPPPK	FRPAGAAPRPPPK	3	FRPAGAAPRPPPK3	21115.7		
Q9JHW0	Q9JHW0	PSB7_RAT	Psmb7	Proteasome subunit beta type-7	1	FRPDMEEEEAK	FRPDMEEEEAK	2	FRPDMEEEEAK2	9975.87	12540.9	10801.2
Q9JHW0	Q9JHW0	PSB7_RAT	Psmb7	Proteasome subunit beta type-7	1	FRPDMEEEEAK	FRPDMEEEEAK	3	FRPDMEEEEAK3	494550	448334	488771
Q9JHW0	Q9JHW0	PSB7_RAT	Psmb7	Proteasome subunit beta type-7	1	FRPDMEEEEAKK	FRPDMEEEEAKK	2	FRPDMEEEEAKK2	4979.82	3257.41	977.555
Q9JHW0	Q9JHW0	PSB7_RAT	Psmb7	Proteasome subunit beta type-7	1	FRPDMEEEEAKK	FRPDMEEEEAKK	3	FRPDMEEEEAKK3	240818	211152	195652
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	FRPLNESEVNR	FRPLNESEVNR	3	FRPLNESEVNR3	71735.8	82288.4	60626.1
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	FRPLNESEVNRGDK	FRPLNESEVNRGDK	3	FRPLNESEVNRGDK3	10531.2	11623.6	8194.44
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	FRPLNESEVNRGDK	FRPLNESEVNRGDK	4	FRPLNESEVNRGDK4	32190.5	38404.7	33218
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	FRPPLLEMLAR	FRPPLLEMLAR	3	FRPPLLEMLAR3	17473.2	14754	22158.2
Q9EQV6	Q9EQV6	TPP1_RAT	Tpp1	Tripeptidyl-peptidase 1	1	FRPSFPASSPYVTTVGGTSFK	FRPSFPASSPYVTTVGGTSFK	3	FRPSFPASSPYVTTVGGTSFK3	38713.3	34654.4	44502.5
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	FRPVPLGQTFLGIK	FRPVPLGQTFLGIK	3	FRPVPLGQTFLGIK3	16249.7	11410.2	12891.8
Q642B0	Q642B0	Q642B0_RAT	Gpc4	Glypican 4	1	FRPYHPEQRPTTAAGTSLDR	FRPYHPEQRPTTAAGTSLDR	4	FRPYHPEQRPTTAAGTSLDR4	9321.51	8825.01	6832.22
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	FRQEPQVIFDK	FRQEPQVIFDK	3	FRQEPQVIFDK3	15802.6	13020.2	12301.3
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	FRQQLGSDSGDVESHLSFLEK	FRQQLGSDSGDVESHLSFLEK	3	FRQQLGSDSGDVESHLSFLEK3	178471	213784	209484
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	FRQQLGSDSGDVESHLSFLEK	FRQQLGSDSGDVESHLSFLEK	4	FRQQLGSDSGDVESHLSFLEK4	1.58026e+06	2.02185e+06	2.1782e+06
P47727	P47727	CBR1_RAT	Cbr1	Carbonyl reductase [NADPH] 1	1	FRSETITEEELVGLMNK	FRSETITEEELVGLMNK	3	FRSETITEEELVGLMNK3	7602.91	5233.67	10261
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	FRSPAAPSPLALR	FRSPAAPSPLALR	3	FRSPAAPSPLALR3	10746.5	23161.4	19678.1
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	FRTDEADDVK	FRTDEADDVK	3	FRTDEADDVK3	9125.96	10392.7	6835.32
P14046	Q6IE52;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	FRVVSMDK	FRVVSMDK	2	FRVVSMDK2	523175	605830	573938
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	FRVVSMDKNLHPLNELFPLAYIEDPK	FRVVSMDKNLHPLNELFPLAYIEDPK	4	FRVVSMDKNLHPLNELFPLAYIEDPK4	87598.4	92145.8	77451.4
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	FRWENNFLIPGLASGPPDLR	FRWENNFLIPGLASGPPDLR	3	FRWENNFLIPGLASGPPDLR3	10774	9351.22	16143.6
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	FSAAFETTLGK	FSAAFETTLGK	2	FSAAFETTLGK2	17375.4	26484.5	38421.4
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	FSAAGEYDILSIK	FSAAGEYDILSIK	2	FSAAGEYDILSIK2	41400.4	35359.9	39582
A0A8I5ZKS4	A0A8I5ZKS4	A0A8I5ZKS4_RAT	Hycc1	Family with sequence similarity 126, member A	1	FSACSLQEEK	FSAC(UniMod:4)SLQEEK	2	FSAC(UniMod:4)SLQEEK2	9309.38	7790.92	13973.9
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	FSADAFADQLYQYVTK	FSADAFADQLYQYVTK	2	FSADAFADQLYQYVTK2	11045.4	16368.5	16961.3
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	FSADAFADQLYQYVTK	FSADAFADQLYQYVTK	3	FSADAFADQLYQYVTK3	10322.9	14086.8	
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	FSAEDEALSNIAR	FSAEDEALSNIAR	2	FSAEDEALSNIAR2	213055	191953	189992
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	FSAEDEALSNIAR	FSAEDEALSNIAR	3	FSAEDEALSNIAR3	26909.2	30370.2	22698.5
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	FSAEFDFR	FSAEFDFR	2	FSAEFDFR2	2.49933e+06	2.73416e+06	2.40166e+06
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	FSAEKPVIEVPSMTILDK	FSAEKPVIEVPSMTILDK	3	FSAEKPVIEVPSMTILDK3	24107.8	22222.5	24941.3
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	FSAEKPVIEVPSMTILDKK	FSAEKPVIEVPSMTILDKK	4	FSAEKPVIEVPSMTILDKK4	8422.01	8251.1	6785.69
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	FSAEVLGSLR	FSAEVLGSLR	2	FSAEVLGSLR2	171840	148699	169537
Q4KLN3	Q4KLN3	Q4KLN3_RAT	Srpk1	SRSF protein kinase 1	1	FSAGNFLINPLEPK	FSAGNFLINPLEPK	2	FSAGNFLINPLEPK2	11867.3	5406.2	8162.3
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	FSAHCSCDSK	FSAHC(UniMod:4)SC(UniMod:4)DSK	2	FSAHC(UniMod:4)SC(UniMod:4)DSK2			72888.8
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	FSAHCSCDSK	FSAHC(UniMod:4)SC(UniMod:4)DSK	3	FSAHC(UniMod:4)SC(UniMod:4)DSK3			16881.3
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	FSAHCSCDSKDNVLHVEINGISPK	FSAHC(UniMod:4)SC(UniMod:4)DSKDNVLHVEINGISPK	4	FSAHC(UniMod:4)SC(UniMod:4)DSKDNVLHVEINGISPK4	9856.1	13939.1	12057.6
Q8CHI9	Q8CHI9	CHSTF_RAT	Chst15	Carbohydrate sulfotransferase 15	1	FSAIKEPHWWTR	FSAIKEPHWWTR	4	FSAIKEPHWWTR4		4933.59	
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	FSALLNDCIR	FSALLNDC(UniMod:4)IR	2	FSALLNDC(UniMod:4)IR2	36412.2	23735.4	34616.8
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	FSALQQTLPVENTDNR	FSALQQTLPVENTDNR	2	FSALQQTLPVENTDNR2	51302	42679.3	45439.2
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	FSALQQTLPVENTDNR	FSALQQTLPVENTDNR	3	FSALQQTLPVENTDNR3	24246.4	36502.5	43088.3
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	FSALQQTLPVENTDNRR	FSALQQTLPVENTDNRR	3	FSALQQTLPVENTDNRR3	341634	387313	350743
F7FPL2	F7FPL2	F7FPL2_RAT	Smoc2	SPARC related modular calcium binding 2	1	FSALTFLR	FSALTFLR	2	FSALTFLR2	10612.4	8720.65	12729.5
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	FSALTTK	FSALTTK	2	FSALTTK2	62880.2	73510.8	70507.4
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	FSAMCHSCHSDPEIR	FSAMC(UniMod:4)HSC(UniMod:4)HSDPEIR	3	FSAMC(UniMod:4)HSC(UniMod:4)HSDPEIR3	4229.99	5293.02	8986.12
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	FSAMCHSCHSDPEIR	FSAMC(UniMod:4)HSC(UniMod:4)HSDPEIR	4	FSAMC(UniMod:4)HSC(UniMod:4)HSDPEIR4	22837.1	33798	25998.8
A2RRU1	A2RRU1	GYS1_RAT	Gys1	Glycogen [starch] synthase, muscle	1	FSAMHEFQNLHAQSK	FSAMHEFQNLHAQSK	3	FSAMHEFQNLHAQSK3	9895.5	10527.7	10716.5
A2RRU1	A2RRU1	GYS1_RAT	Gys1	Glycogen [starch] synthase, muscle	1	FSAMHEFQNLHAQSK	FSAMHEFQNLHAQSK	4	FSAMHEFQNLHAQSK4	18177.6	37685.2	19022.8
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	FSAPLPLELYTSSNFIGLFVK	FSAPLPLELYTSSNFIGLFVK	3	FSAPLPLELYTSSNFIGLFVK3			3288.6
P53534	P53534	PYGB_RAT	Pygb	Glycogen phosphorylase, brain form (Fragment)	1	FSAQLEK	FSAQLEK	2	FSAQLEK2	31854.8	33551.6	26644.9
F7FA09	F7FA09	F7FA09_RAT	Pex11b	Peroxisomal biogenesis factor 11 beta	1	FSAQSQAR	FSAQSQAR	2	FSAQSQAR2	18742.3	15279.5	7690.14
Q5BJT4	Q5BJT4	TXD15_RAT	Txndc15	Thioredoxin domain-containing protein 15	1	FSASLAPHFNSLPR	FSASLAPHFNSLPR	3	FSASLAPHFNSLPR3	4178.15	12111.5	6053.15
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	FSASSGGGGSR	FSASSGGGGSR	2	FSASSGGGGSR2	56975.1		6234.55
F7ETC0	F7ETC0	F7ETC0_RAT	Smpd1	Sphingomyelin phosphodiesterase	1	FSAVAPQLQNAFGWR	FSAVAPQLQNAFGWR	2	FSAVAPQLQNAFGWR2	15408.5	6505.37	13995.5
D3ZKX1	D3ZKX1	D3ZKX1_RAT	Washc3	WASH complex subunit 3	1	FSAVCEEK	FSAVC(UniMod:4)EEK	2	FSAVC(UniMod:4)EEK2	38260.4	26550.5	33440.4
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	FSCACPDQYK	FSC(UniMod:4)AC(UniMod:4)PDQYK	2	FSC(UniMod:4)AC(UniMod:4)PDQYK2	3.44226e+06	3.42421e+06	3.78076e+06
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	FSCACPDQYKGR	FSC(UniMod:4)AC(UniMod:4)PDQYKGR	3	FSC(UniMod:4)AC(UniMod:4)PDQYKGR3	22508.1	27353.3	32705.5
P98105	P98105	LYAM2_RAT	Sele	E-selectin	1	FSCDEGFELK	FSC(UniMod:4)DEGFELK	2	FSC(UniMod:4)DEGFELK2	21129	17772.4	26971.9
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	FSCHCPQGYQLLATR	FSC(UniMod:4)HC(UniMod:4)PQGYQLLATR	2	FSC(UniMod:4)HC(UniMod:4)PQGYQLLATR2	67915.6	75112.2	76312.1
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	FSCHCPQGYQLLATR	FSC(UniMod:4)HC(UniMod:4)PQGYQLLATR	3	FSC(UniMod:4)HC(UniMod:4)PQGYQLLATR3	528815	490077	489305
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	FSCLLPDPR	FSC(UniMod:4)LLPDPR	2	FSC(UniMod:4)LLPDPR2	14537.5	21783.4	18565.3
O35568	O35568	FBLN3_RAT	Efemp1	EGF-containing fibulin-like extracellular matrix protein 1	1	FSCMCPQGYQVVR	FSC(UniMod:4)MC(UniMod:4)PQGYQVVR	2	FSC(UniMod:4)MC(UniMod:4)PQGYQVVR2	60719.3	54073.5	44383.5
O35568	O35568	FBLN3_RAT	Efemp1	EGF-containing fibulin-like extracellular matrix protein 1	1	FSCMCPQGYQVVR	FSC(UniMod:4)MC(UniMod:4)PQGYQVVR	3	FSC(UniMod:4)MC(UniMod:4)PQGYQVVR3	2042.8		2299.94
O70210	O70210	CHAD_RAT	Chad	Chondroadherin	1	FSDAAFAGVTTLK	FSDAAFAGVTTLK	2	FSDAAFAGVTTLK2	11800.4		10346.4
Q9Z1N3	Q9Z1N3	MYO9A_RAT	Myo9a	Unconventional myosin-IXa	1	FSDALVLR	FSDALVLR	2	FSDALVLR2		1781.21	5178.27
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	FSDEAELK	FSDEAELK	2	FSDEAELK2	254968	242060	245830
A0A8I6A678	A0A8I6A678	A0A8I6A678_RAT	Snx2	Sorting nexin-2	1	FSDFLGLHSK	FSDFLGLHSK	2	FSDFLGLHSK2	4988.34	2623.74	4696.47
A0A8I6A678	A0A8I6A678	A0A8I6A678_RAT	Snx2	Sorting nexin-2	1	FSDFLGLHSK	FSDFLGLHSK	3	FSDFLGLHSK3	15671.3	12854.3	7019.74
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	FSDFLGLYEK	FSDFLGLYEK	2	FSDFLGLYEK2	139440	151146	126207
M0RD40	M0RD40	M0RD40_RAT	Sik3	non-specific serine/threonine protein kinase	1	FSDGAASIQAFK	FSDGAASIQAFK	2	FSDGAASIQAFK2	7003.99	5919	3166.46
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	FSDGLESNR	FSDGLESNR	2	FSDGLESNR2	322842	328367	301716
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	FSDIQIR	FSDIQIR	2	FSDIQIR2	70526.5	61635	62372
P0CE43	P0CE43	GRB10_RAT	Grb10	Growth factor receptor-bound protein 10	1	FSDLIQLVDFYQLNK	FSDLIQLVDFYQLNK	2	FSDLIQLVDFYQLNK2	6549.73	6837.47	11603.2
P0CE43	P0CE43	GRB10_RAT	Grb10	Growth factor receptor-bound protein 10	1	FSDLIQLVDFYQLNK	FSDLIQLVDFYQLNK	3	FSDLIQLVDFYQLNK3	3371.24		
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	FSDLLQFTTQVSR	FSDLLQFTTQVSR	2	FSDLLQFTTQVSR2	6942.83	3875.69	3692.87
Q4FZV0	Q4FZV0	MANBA_RAT	Manba	Beta-mannosidase	1	FSDNGFLMIK	FSDNGFLMIK	2	FSDNGFLMIK2	2586.22	5875.54	7485.13
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	FSDQFPLPLK	FSDQFPLPLK	2	FSDQFPLPLK2	53233.3	64538.6	69581.1
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	FSDQFPLPLKER	FSDQFPLPLKER	3	FSDQFPLPLKER3	2293.77	8933.65	5436.74
A0A0G2K2M3	A0A0G2K2M3	A0A0G2K2M3_RAT	Stat6	Signal transducer and activator of transcription	1	FSDSEIGGITIAHVIR	FSDSEIGGITIAHVIR	3	FSDSEIGGITIAHVIR3	3472.31		
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	FSDSGAETFK	FSDSGAETFK	2	FSDSGAETFK2	253954	282589	259507
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	FSDSYASVIK	FSDSYASVIK	2	FSDSYASVIK2	164447	220230	234623
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	FSDTCFLDTDGQATCDACAPGYTGR	FSDTC(UniMod:4)FLDTDGQATC(UniMod:4)DAC(UniMod:4)APGYTGR	3	FSDTC(UniMod:4)FLDTDGQATC(UniMod:4)DAC(UniMod:4)APGYTGR3	38002.1	52223.7	34570.7
Q66H59	Q66H59	NPL_RAT	Npl	N-acetylneuraminate lyase	1	FSDTDLLDFGQCVDQNHQR	FSDTDLLDFGQC(UniMod:4)VDQNHQR	3	FSDTDLLDFGQC(UniMod:4)VDQNHQR3	17586.3	25927.8	20602.6
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	FSDTRPWDPLNDMIQFEK	FSDTRPWDPLNDMIQFEK	3	FSDTRPWDPLNDMIQFEK3	10590.5	25456.4	22912.2
P13107	P13107	CP2B3_RAT	Cyp2b3	Cytochrome P450 2B3	1	FSDVSPMGLPCR	FSDVSPMGLPC(UniMod:4)R	2	FSDVSPMGLPC(UniMod:4)R2	11852.9	7387.9	10046
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	FSEAEHWLDYFPPLAVQDLK	FSEAEHWLDYFPPLAVQDLK	3	FSEAEHWLDYFPPLAVQDLK3	8946.6	9725.22	9650.09
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	FSEAEHWLDYFPPLAVQDLKK	FSEAEHWLDYFPPLAVQDLKK	3	FSEAEHWLDYFPPLAVQDLKK3	12089.1	9290.54	13784.4
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	FSEAEHWLDYFPPLAVQDLKK	FSEAEHWLDYFPPLAVQDLKK	4	FSEAEHWLDYFPPLAVQDLKK4	18491.2	11085	14344.6
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	FSEDADGVLPVK	FSEDADGVLPVK	2	FSEDADGVLPVK2	69219.5	66058.4	71996.3
A0A0G2JUF2	A0A0G2JUF2	A0A0G2JUF2_RAT	Snx30	Sorting nexin family member 30	1	FSEEFVETR	FSEEFVETR	2	FSEEFVETR2	4635.24	7795.01	7245.2
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	FSEEVASAVELILVTK	FSEEVASAVELILVTK	2	FSEEVASAVELILVTK2	32269.3	29411.4	34047.3
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	FSEEVASAVELILVTK	FSEEVASAVELILVTK	3	FSEEVASAVELILVTK3	36679.6	28478.5	47563.4
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	FSEEVEMLK	FSEEVEMLK	2	FSEEVEMLK2	22691.9	11945	13879.1
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	FSEGASYLDHTSPAER	FSEGASYLDHTSPAER	2	FSEGASYLDHTSPAER2	387502	349526	301723
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	FSEGASYLDHTSPAER	FSEGASYLDHTSPAER	3	FSEGASYLDHTSPAER3	1.09542e+07	1.25841e+07	1.33318e+07
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	FSEGASYLDHTSPAERK	FSEGASYLDHTSPAERK	2	FSEGASYLDHTSPAERK2	1775.91	2115.02	
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	FSEGASYLDHTSPAERK	FSEGASYLDHTSPAERK	3	FSEGASYLDHTSPAERK3	59907.2	90018.7	117887
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	FSEGASYLDHTSPAERK	FSEGASYLDHTSPAERK	4	FSEGASYLDHTSPAERK4	82799.6	154885	172682
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	FSEGTSADR	FSEGTSADR	2	FSEGTSADR2	48042.9	110525	127719
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	FSEGTSADREIQR	FSEGTSADREIQR	3	FSEGTSADREIQR3	60246.3	86679.8	107384
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	FSEIQLSR	FSEIQLSR	2	FSEIQLSR2	21367	22164.8	19609.1
O35397	O35397	CASP6_RAT	Casp6	Caspase-6	1	FSELGFEVK	FSELGFEVK	2	FSELGFEVK2	11165.3	12628.3	6789.66
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	FSELTSEK	FSELTSEK	2	FSELTSEK2	497881	513997	504995
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	FSELVMK	FSELVMK	2	FSELVMK2	62881.2	49782.8	48560.3
D4ADT5	D4ADT5	D4ADT5_RAT	Rig1	RNA helicase	1	FSELWLVDK	FSELWLVDK	2	FSELWLVDK2	4215.98	5857.98	
P68182	P68182;P27791	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	0	FSEPHAR	FSEPHAR	2	FSEPHAR2	222038	232582	234103
Q5EB73	Q5EB73	PGAP4_RAT	Pgap4	Post-GPI attachment to proteins factor 4	1	FSEPHLQDALYLK	FSEPHLQDALYLK	3	FSEPHLQDALYLK3	21631.1	43494	24708.4
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	FSEQVFK	FSEQVFK	2	FSEQVFK2	66463.6	64935.6	86916.9
Q6P7A9	Q6P7A9	LYAG_RAT	Gaa	Lysosomal alpha-glucosidase	1	FSETAQQAMR	FSETAQQAMR	2	FSETAQQAMR2	2062.31	3609.76	2689.08
B5DFC3	B5DFC3	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	1	FSETFSLYPQFMFHLR	FSETFSLYPQFMFHLR	3	FSETFSLYPQFMFHLR3	3663.86	5745.72	6839.7
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	FSETSEGGITCSWVEHQDDDK	FSETSEGGITC(UniMod:4)SWVEHQDDDK	3	FSETSEGGITC(UniMod:4)SWVEHQDDDK3	8571.38	9754.57	6044.84
P07335	P07335	KCRB_RAT	Ckb	Creatine kinase B-type	1	FSEVLKR	FSEVLKR	2	FSEVLKR2	17386.8	10497.7	11891.1
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	FSEYLCK	FSEYLC(UniMod:4)K	2	FSEYLC(UniMod:4)K2	16302.4	22631.6	19078.4
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	FSEYLLECPSAEVR	FSEYLLEC(UniMod:4)PSAEVR	2	FSEYLLEC(UniMod:4)PSAEVR2	27637.6	23163.7	20184.3
O08623	O08623	SQSTM_RAT	Sqstm1	Sequestosome-1	1	FSFCFSPEPEAEAAAGPGPCER	FSFC(UniMod:4)FSPEPEAEAAAGPGPC(UniMod:4)ER	3	FSFC(UniMod:4)FSPEPEAEAAAGPGPC(UniMod:4)ER3	19817.7	19051.6	25159.7
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	FSFDLGK	FSFDLGK	2	FSFDLGK2	47169.4	33415.6	40256.8
Q5XI42	A0A8I6ACF4;A0A8I6AW67;Q5XI42	AL3B1_RAT	Aldh3b1	Aldehyde dehydrogenase family 3 member B1	0	FSFDTFSNQR	FSFDTFSNQR	2	FSFDTFSNQR2	4055.67		4587.51
D3ZA88	D3ZA88	D3ZA88_RAT	Trim34	Tripartite motif-containing 34	1	FSFENLQANK	FSFENLQANK	2	FSFENLQANK2	14987.7	2812.42	11561.6
P43527	P43527	CASP1_RAT	Casp1	Caspase-1	1	FSFEQPDSR	FSFEQPDSR	2	FSFEQPDSR2	5794.68	2252.24	5599.63
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	FSFGATSNFAR	FSFGATSNFAR	2	FSFGATSNFAR2	23905.9	16260.2	20190.3
A0A8I6A5X2	A0A8I6A5X2	A0A8I6A5X2_RAT	Usp32	ubiquitinyl hydrolase 1	1	FSFGTTAHPIEHGEDR	FSFGTTAHPIEHGEDR	4	FSFGTTAHPIEHGEDR4	5705.87	3449.83	4663.12
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	FSFMTCPFILNAVTK	FSFMTC(UniMod:4)PFILNAVTK	2	FSFMTC(UniMod:4)PFILNAVTK2	3636.67	5533.38	2245.1
Q6F596	Q6F596	GGPPS_RAT	Ggps1	Geranylgeranyl pyrophosphate synthase	1	FSFPTIHAIWSRPESTQVQNILR	FSFPTIHAIWSRPESTQVQNILR	4	FSFPTIHAIWSRPESTQVQNILR4	11068.5	14720	19609.8
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	FSFQCPGR	FSFQC(UniMod:4)PGR	2	FSFQC(UniMod:4)PGR2	1.06473e+06	1.01595e+06	1.03719e+06
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	FSFSGNTLVSSSADPK	FSFSGNTLVSSSADPK	2	FSFSGNTLVSSSADPK2	89093.1	86220.6	79606.6
D4ABI7	D4ABI7	D4ABI7_RAT	Hacd3	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase	1	FSFTLPYPLR	FSFTLPYPLR	2	FSFTLPYPLR2	8584.11	10932.4	9647.19
Q3SWS8	Q3SWS8	RAE1L_RAT	Rae1	mRNA export factor	1	FSFWDKDAR	FSFWDKDAR	3	FSFWDKDAR3	19232.9	22619.6	29964.3
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	FSGATGQMSDLNK	FSGATGQMSDLNK	2	FSGATGQMSDLNK2	15842.3	15180.6	13689.5
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	FSGCTLTDGTLK	FSGC(UniMod:4)TLTDGTLK	2	FSGC(UniMod:4)TLTDGTLK2	6921.07	5428.41	4968.02
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	FSGFEASHGPIK	FSGFEASHGPIK	2	FSGFEASHGPIK2	70193.3	52398.8	52718
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	FSGFEASHGPIK	FSGFEASHGPIK	3	FSGFEASHGPIK3	699546	627355	632503
D3ZTX4	D3ZTX4	D3ZTX4_RAT	Mgam	Maltase-glucoamylase	1	FSGFPDLINR	FSGFPDLINR	2	FSGFPDLINR2	18122.4		
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	FSGFYSMQK	FSGFYSMQK	2	FSGFYSMQK2	13157.5	26429.5	49912.5
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	FSGGFGAR	FSGGFGAR	2	FSGGFGAR2	118510	108757	104119
G3V728	G3V728	G3V728_RAT	Nipsnap1	Nipsnap homolog 1	1	FSGGYPALMDCMNK	FSGGYPALMDC(UniMod:4)MNK	2	FSGGYPALMDC(UniMod:4)MNK2	38961.2	38607.7	32678
P04916	P04916	RET4_RAT	Rbp4	Retinol-binding protein 4	1	FSGLWYAIAK	FSGLWYAIAK	2	FSGLWYAIAK2	103922	85081.4	90196
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	FSGNQNDFLQEFLYEYSR	FSGNQNDFLQEFLYEYSR	3	FSGNQNDFLQEFLYEYSR3	21410.9	17245.2	26232.8
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	FSGNQNDFLQEFLYEYSRR	FSGNQNDFLQEFLYEYSRR	3	FSGNQNDFLQEFLYEYSRR3	4521.88		8235.73
A0A8I6A8Q1	A0A8I6A8Q1	A0A8I6A8Q1_RAT	A2ml1	Alpha-2-macroglobulin-like 1	1	FSGPNNTPMVNK	FSGPNNTPMVNK	2	FSGPNNTPMVNK2	19114.1	11414	9732.94
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	FSGQHFCGGTLISPEWVLTAAHCLEK	FSGQHFC(UniMod:4)GGTLISPEWVLTAAHC(UniMod:4)LEK	4	FSGQHFC(UniMod:4)GGTLISPEWVLTAAHC(UniMod:4)LEK4	660792	360397	358451
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	FSGQQLR	FSGQQLR	2	FSGQQLR2	43544.2	39177	41804.8
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	FSGQVTLVGK	FSGQVTLVGK	2	FSGQVTLVGK2	9592.83	4873.96	9956.58
A0A8I6AAM9	A0A8I6AAM9	A0A8I6AAM9_RAT	ENSRNOG00000068499	Ig-like domain-containing protein	1	FSGSGSEK	FSGSGSEK	2	FSGSGSEK2			23054.8
A0A8I5ZY02	A0A8I6ASD7;A0A8I5ZY02;A0A8I6AJ98;A0A8I6GHG7;A0A8I6AI41	A0A8I5ZY02_RAT	ENSRNOG00000070192	Ig-like domain-containing protein	0	FSGSGSETDFTLK	FSGSGSETDFTLK	2	FSGSGSETDFTLK2	1.69238e+06	1.58137e+06	1.8024e+06
A0A8I6GC23	A0A8I6GC23;A0A8I5ZTK7	A0A8I6GC23_RAT	ENSRNOG00000071049	Ig-like domain-containing protein	0	FSGSGSETEFTLK	FSGSGSETEFTLK	2	FSGSGSETEFTLK2	136181	128350	100144
A0A8I5ZRU2	A0A8I5YC48;D3ZE08;A0A8I5ZRU2;A0A8I5ZYV4;A0A8I6G3M2;A0A8I6AFR0;A0A8I5ZPH3;A0A8I6A7L1;A0A8I5Y130;M0RDZ5;A0A8I6AJF8;A0A8I5Y9R1;A0A8I5YBU3;A0A8I6AHB9	A0A8I5ZRU2_RAT	ENSRNOG00000063550	Ig-like domain-containing protein	0	FSGSGSGTDFTLK	FSGSGSGTDFTLK	2	FSGSGSGTDFTLK2	1.85509e+06	1.72513e+06	1.97947e+06
A0A8I6AB22	F1M663;A0A8I6AB22;A0A8I6AID3;D3ZQR5	A0A8I6AB22_RAT	ENSRNOG00000067079	Ig-like domain-containing protein	0	FSGSGSGTDFTLSINR	FSGSGSGTDFTLSINR	2	FSGSGSGTDFTLSINR2	20482.8	18071.5	18557.9
A0A0G2JW41	A0A0G2JW41;A0A8I5ZX10;A0A0G2K3L5	A0A0G2JW41_RAT	ENSRNOG00000065855	Ig-like domain-containing protein	0	FSGSGSGTDFTLTIR	FSGSGSGTDFTLTIR	2	FSGSGSGTDFTLTIR2	471567	406968	398300
A0A0G2JW41	A0A0G2JW41;A0A8I5ZX10;A0A0G2K3L5	A0A0G2JW41_RAT	ENSRNOG00000065855	Ig-like domain-containing protein	0	FSGSGSGTDFTLTIR	FSGSGSGTDFTLTIR	3	FSGSGSGTDFTLTIR3	3615.72	8902.49	4893.29
A0A8I6GD94	A0A8I6AMF4;A0A8I6GD94	A0A8I6GD94_RAT	Igkvl-ps2	Ig-like domain-containing protein	0	FSGSGSGTQFSLK	FSGSGSGTQFSLK	2	FSGSGSGTQFSLK2	23024.4	14710.5	9274.4
A0A8I6AQ74	A0A8I6AK42;A0A8I5Y765;A0A8I6AJI1;M0R628;A0A8I6AQ74;F1LZK3;A0A8I6AHV2	A0A8I6AQ74_RAT	ENSRNOG00000064086	Ig-like domain-containing protein	0	FSGSGSGTQYSLK	FSGSGSGTQYSLK	2	FSGSGSGTQYSLK2	2.06134e+06	2.00387e+06	2.045e+06
A0A8I6AAJ5	A0A8I6AAJ5	A0A8I6AAJ5_RAT	LOC500180	Ig-like domain-containing protein	1	FSGSGSGTR	FSGSGSGTR	2	FSGSGSGTR2			24670.6
A0A8I5ZX42	A0A8I5ZX42	A0A8I5ZX42_RAT	ENSRNOG00000069427	Immunoglobulin V-set domain-containing protein	1	FSGSGSGTSYSFTISR	FSGSGSGTSYSFTISR	2	FSGSGSGTSYSFTISR2	41748.7	55177.4	57506.9
A0A8I6A3F2	A0A8I6A3F2	A0A8I6A3F2_RAT	AABR07034730.2	Ig-like domain-containing protein	1	FSGSIDR	FSGSIDR	2	FSGSIDR2	798466	859767	735655
A0A0G2K332	A0A0G2K332	A0A0G2K332_RAT	AABR07034729.1	Ig-like domain-containing protein	1	FSGSLLEGK	FSGSLLEGK	1	FSGSLLEGK1	2875.39	2648.67	2234.22
A0A0G2K332	A0A0G2K332	A0A0G2K332_RAT	AABR07034729.1	Ig-like domain-containing protein	1	FSGSLLEGK	FSGSLLEGK	2	FSGSLLEGK2	605360	518777	539685
A0A8I5ZWR1	A0A8I5ZWR1	A0A8I5ZWR1_RAT	ENSRNOG00000069249	Ig-like domain-containing protein	1	FSGSSSGTTAILTIR	FSGSSSGTTAILTIR	2	FSGSSSGTTAILTIR2	12766.3	22306.9	11717.9
A0A8I6AAX0	A0A8I6G5H1;A0A0G2JZS9;A0A8I6AAX0	A0A8I6AAX0_RAT	ENSRNOG00000064181	Ig-like domain-containing protein	0	FSGSSSGTTATLTIR	FSGSSSGTTATLTIR	2	FSGSSSGTTATLTIR2	88400	111775	102461
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	FSGTVLNVPDTSDNSK	FSGTVLNVPDTSDNSK	2	FSGTVLNVPDTSDNSK2	90326.2	93035	106217
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	FSGTVLNVPDTSDNSKK	FSGTVLNVPDTSDNSKK	3	FSGTVLNVPDTSDNSKK3	13187.3	19783.4	
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	FSGVAGEVPSNLSVPVAVGSGPGR	FSGVAGEVPSNLSVPVAVGSGPGR	3	FSGVAGEVPSNLSVPVAVGSGPGR3	245966	254401	231930
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	FSGVDMNAAR	FSGVDMNAAR	2	FSGVDMNAAR2	11556.7	13360.7	16924.6
A0A8I5ZRU2	A0A8I6A935;F1M7B3;A0A8I5ZRU2;A0A8I5ZYV4;A0A8I5ZVJ7;A0A8I6AFR0;A0A0G2K9L1;A0A8I6A7L1;A0A8I5Y130;A0A8I6AVW1	A0A8I5ZRU2_RAT	ENSRNOG00000063550	Ig-like domain-containing protein	0	FSGVPDR	FSGVPDR	2	FSGVPDR2	2.7689e+06	2.62473e+06	2.83214e+06
A0A8I5YBU3	A0A8I5YBU3	A0A8I5YBU3_RAT	ENSRNOG00000065160	Ig-like domain-containing protein	1	FSGVSNR	FSGVSNR	2	FSGVSNR2	196148	157766	182958
P25113	P25113	PGAM1_RAT	Pgam1	Phosphoglycerate mutase 1	1	FSGWYDADLSPAGHEEAK	FSGWYDADLSPAGHEEAK	3	FSGWYDADLSPAGHEEAK3	54370.7	46740.4	46185.6
D3ZWU9	D3ZWU9	D3ZWU9_RAT	Rmnd5a	RING-type E3 ubiquitin transferase	1	FSGYGQLCER	FSGYGQLC(UniMod:4)ER	2	FSGYGQLC(UniMod:4)ER2		6522.65	10541.9
F7EUD8	F7EUD8	F7EUD8_RAT	Trpc6	Transient receptor ion channel domain-containing protein	1	FSHDVTPIILAAHCQEYEIVHTLLR	FSHDVTPIILAAHC(UniMod:4)QEYEIVHTLLR	4	FSHDVTPIILAAHC(UniMod:4)QEYEIVHTLLR4	7085.92	17220.6	8884.18
Q64232	Q64232	TECR_RAT	Tecr	Very-long-chain enoyl-CoA reductase	1	FSHGTMPLR	FSHGTMPLR	2	FSHGTMPLR2	29296.5	20677.8	29218.7
Q7TSU1	D4A631;Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	0	FSHILQK	FSHILQK	2	FSHILQK2	7620.43	6095.35	9138.68
P55062	P55062	BI1_RAT	Tmbim6	Bax inhibitor 1	1	FSHITPSTQQHLK	FSHITPSTQQHLK	3	FSHITPSTQQHLK3	5278.29	3100	
P55062	P55062	BI1_RAT	Tmbim6	Bax inhibitor 1	1	FSHITPSTQQHLK	FSHITPSTQQHLK	4	FSHITPSTQQHLK4	5961.99	2885.31	1341.84
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	FSHPTALPQQIPSQQLMSK	FSHPTALPQQIPSQQLMSK	3	FSHPTALPQQIPSQQLMSK3	34711.5	51138.8	38963.3
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	FSHQGVQLIDFSPCER	FSHQGVQLIDFSPC(UniMod:4)ER	2	FSHQGVQLIDFSPC(UniMod:4)ER2	5517.26	13135.3	12491.4
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	FSHQGVQLIDFSPCER	FSHQGVQLIDFSPC(UniMod:4)ER	3	FSHQGVQLIDFSPC(UniMod:4)ER3	201765	223629	206050
P18614	P18614	ITA1_RAT	Itga1	Integrin alpha-1	1	FSIAILGHYNR	FSIAILGHYNR	3	FSIAILGHYNR3	12141.8	15735.7	4290.91
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	FSIATQICNITPGK	FSIATQIC(UniMod:4)NITPGK	2	FSIATQIC(UniMod:4)NITPGK2	7.29717e+06	7.01402e+06	5.89674e+06
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	FSIATQICNITPGK	FSIATQIC(UniMod:4)NITPGK	3	FSIATQIC(UniMod:4)NITPGK3	752131	762777	623611
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	FSIDIETFYK	FSIDIETFYK	2	FSIDIETFYK2	25637.7	20845.6	18679.7
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	FSIDTNGISDYSLNIK	FSIDTNGISDYSLNIK	2	FSIDTNGISDYSLNIK2	199838	156028	132354
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	FSIDTNGISDYSLNIK	FSIDTNGISDYSLNIK	3	FSIDTNGISDYSLNIK3	600918	506984	452128
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	FSIDTNGISDYSLNIKVYHK	FSIDTNGISDYSLNIKVYHK	4	FSIDTNGISDYSLNIKVYHK4	51386.1	19688.8	19927.3
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	FSIDTSGISR	FSIDTSGISR	2	FSIDTSGISR2	1.13747e+06	1.17169e+06	1.14686e+06
Q03626	Q6IE52;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	FSIDTSSISGYSLNIK	FSIDTSSISGYSLNIK	2	FSIDTSSISGYSLNIK2	584131	380528	226619
Q03626	Q6IE52;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	FSIDTSSISGYSLNIK	FSIDTSSISGYSLNIK	3	FSIDTSSISGYSLNIK3	51608.7	36778.1	26376.9
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	FSIHTSIINNISLVTR	FSIHTSIINNISLVTR	2	FSIHTSIINNISLVTR2		2926.15	1484.68
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	FSIHTSIINNISLVTR	FSIHTSIINNISLVTR	3	FSIHTSIINNISLVTR3	136910	118421	108175
Q6QBQ4	Q6QBQ4	PLS3_RAT	Plscr3	Phospholipid scramblase 3	1	FSILDADR	FSILDADR	2	FSILDADR2	12381.4	12280.7	11104.5
Q6QBQ4	Q6QBQ4	PLS3_RAT	Plscr3	Phospholipid scramblase 3	1	FSILDADRQPVLR	FSILDADRQPVLR	3	FSILDADRQPVLR3	32393.8	50501.3	40134.6
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	FSIMPAWQK	FSIMPAWQK	2	FSIMPAWQK2	129415	152818	110384
P27590	P27590	UROM_RAT	Umod	Uromodulin	1	FSIQMFR	FSIQMFR	2	FSIQMFR2	8445.86	15983.4	7957.01
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	FSISADYNLEDVLPELGIK	FSISADYNLEDVLPELGIK	3	FSISADYNLEDVLPELGIK3	27456	29097	22152.5
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	FSISAHGK	FSISAHGK	2	FSISAHGK2	148069	70180.7	100400
P05545	A0A0G2JSK1;P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	0	FSISTDYNLEEVLPELGIR	FSISTDYNLEEVLPELGIR	3	FSISTDYNLEEVLPELGIR3	62701.8	43353	55477
P05545	A0A0G2JSK1;P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	0	FSISTDYNLEEVLPELGIRK	FSISTDYNLEEVLPELGIRK	3	FSISTDYNLEEVLPELGIRK3	41584.1	31717.1	43931.6
P05544	P05544	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	1	FSISTDYSLK	FSISTDYSLK	2	FSISTDYSLK2	2.70171e+06	2.71192e+06	2.55992e+06
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	FSIYNNMFCAGYR	FSIYNNMFC(UniMod:4)AGYR	2	FSIYNNMFC(UniMod:4)AGYR2	10772.2	6891.37	10636.1
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	FSIYNNMFCAGYR	FSIYNNMFC(UniMod:4)AGYR	3	FSIYNNMFC(UniMod:4)AGYR3	530160	663354	651010
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	FSIYNNMFCAGYREGGK	FSIYNNMFC(UniMod:4)AGYREGGK	3	FSIYNNMFC(UniMod:4)AGYREGGK3	8201.55	6181.34	14170.7
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	FSLAGATNLNGGLLR	FSLAGATNLNGGLLR	2	FSLAGATNLNGGLLR2	21346.2	23088.8	31172.6
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	FSLAGATNLNGGLLR	FSLAGATNLNGGLLR	3	FSLAGATNLNGGLLR3	596286	740814	643946
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	FSLAGATNLNGGLLRGIEILNR	FSLAGATNLNGGLLRGIEILNR	3	FSLAGATNLNGGLLRGIEILNR3	6340.64	29453.3	11029.8
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	FSLALECGNIEIALEAAK	FSLALEC(UniMod:4)GNIEIALEAAK	2	FSLALEC(UniMod:4)GNIEIALEAAK2	10860	44894.7	19602.1
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	FSLCSDNLEGISEGPSNR	FSLC(UniMod:4)SDNLEGISEGPSNR	3	FSLC(UniMod:4)SDNLEGISEGPSNR3	8844.56	6679.64	12093.9
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	FSLCSIR	FSLC(UniMod:4)SIR	2	FSLC(UniMod:4)SIR2	316915	300903	310202
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	FSLDALSLR	FSLDALSLR	2	FSLDALSLR2	33226.7	31534.8	37896.3
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	FSLDVCEAMEYLEGNNFVHR	FSLDVC(UniMod:4)EAMEYLEGNNFVHR	3	FSLDVC(UniMod:4)EAMEYLEGNNFVHR3	13831.7	11088.1	8210.17
F1M9D6	F1M9D6	F1M9D6_RAT	Stat1	Signal transducer and activator of transcription	1	FSLENNFLLQHNIR	FSLENNFLLQHNIR	3	FSLENNFLLQHNIR3	9878.4	7213.69	17196.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	FSLESLTSYLSIESFTK	FSLESLTSYLSIESFTK	2	FSLESLTSYLSIESFTK2	16050.8	19991.7	14742.7
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	FSLESLTSYLSIESFTK	FSLESLTSYLSIESFTK	3	FSLESLTSYLSIESFTK3	21971.4	13004.5	20914.4
Q5I0E7	Q5I0E7	TMED9_RAT	Tmed9	Transmembrane emp24 domain-containing protein 9	1	FSLFAGGMLR	FSLFAGGMLR	2	FSLFAGGMLR2	282961	251552	268556
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	FSLFSER	FSLFSER	2	FSLFSER2	1.04531e+06	1.00428e+06	1.10909e+06
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	FSLGSTINVK	FSLGSTINVK	2	FSLGSTINVK2	1.55643e+06	1.5003e+06	1.27762e+06
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	FSLGVEIK	FSLGVEIK	2	FSLGVEIK2	19216.1	15651.6	19387.4
Q8R4Z9	Q8R4Z9	MFN1_RAT	Mfn1	Mitofusin-1	1	FSLGWSSLVHR	FSLGWSSLVHR	3	FSLGWSSLVHR3	3474.77	711.189	3128.38
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	FSLIDLAGNER	FSLIDLAGNER	2	FSLIDLAGNER2	754986	886782	865652
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	FSLIDLAGNER	FSLIDLAGNER	3	FSLIDLAGNER3	3328.62	6995.96	3583.94
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	FSLLTASSSITEMK	FSLLTASSSITEMK	2	FSLLTASSSITEMK2	8604.83	19259	7689.07
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	FSLNLQQ	FSLNLQQ	1	FSLNLQQ1	24506.7	20278.2	20734.6
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	FSLNLQQ	FSLNLQQ	2	FSLNLQQ2	28575	22803.7	16488.2
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	FSLPDFK	FSLPDFK	2	FSLPDFK2	959863	1.07526e+06	1.01929e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	FSLPDFKK	FSLPDFKK	2	FSLPDFKK2	49402.5	36734.5	56012.2
A0A8I6ABF2	A0A8I6ABF2	A0A8I6ABF2_RAT	Lmf1	Lipase maturation factor	1	FSLPGGQHAAQGK	FSLPGGQHAAQGK	2	FSLPGGQHAAQGK2	5167.6	7265.01	10400.1
A0A8I6ABF2	A0A8I6ABF2	A0A8I6ABF2_RAT	Lmf1	Lipase maturation factor	1	FSLPGGQHAAQGK	FSLPGGQHAAQGK	3	FSLPGGQHAAQGK3	32946	50565.7	43655.5
A0A0G2JV12	A0A0G2JV12	A0A0G2JV12_RAT	Col15a1	Collagen type XV alpha 1 chain	1	FSLPIVNLK	FSLPIVNLK	2	FSLPIVNLK2	12432.2	6046.25	8118.39
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	FSLPPHEGPGGNLLSGALYR	FSLPPHEGPGGNLLSGALYR	3	FSLPPHEGPGGNLLSGALYR3	114298	108286	112978
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	FSLQEAESDQR	FSLQEAESDQR	2	FSLQEAESDQR2	11176.2	18724.7	20868.2
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	FSLSCTETLMSELGNIAK	FSLSC(UniMod:4)TETLMSELGNIAK	3	FSLSC(UniMod:4)TETLMSELGNIAK3	13473.8	13924.7	7859.32
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	FSLSMPQVQDPSLVR	FSLSMPQVQDPSLVR	2	FSLSMPQVQDPSLVR2	10945.8	18512.1	11283.4
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	FSLVGIAGQDLNEGNR	FSLVGIAGQDLNEGNR	2	FSLVGIAGQDLNEGNR2	33848.9	32578	43920.3
D3ZQ80	D3ZQ80	D3ZQ80_RAT	Smg8	Nonsense-mediated mRNA decay factor SMG8	1	FSLVNTVCDR	FSLVNTVC(UniMod:4)DR	2	FSLVNTVC(UniMod:4)DR2	12769.7	15060.9	
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	FSLVSVEQLSLPPVADK	FSLVSVEQLSLPPVADK	2	FSLVSVEQLSLPPVADK2	18957.5	15157.9	18130.9
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	FSMALCDQEK	FSMALC(UniMod:4)DQEK	2	FSMALC(UniMod:4)DQEK2	84338.8	86528.1	83720.3
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	FSMGLLMGEAR	FSMGLLMGEAR	2	FSMGLLMGEAR2	34165.8	23245.9	26967.3
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	FSMGSAVAGMLK	FSMGSAVAGMLK	2	FSMGSAVAGMLK2	26285.9	17492	24360.3
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	FSMLVAAIQSAGLMETLNR	FSMLVAAIQSAGLMETLNR	3	FSMLVAAIQSAGLMETLNR3	17082.5	2903.2	
A0A0G2JUA5	A0A0G2JUA5	A0A0G2JUA5_RAT	Ahnak	AHNAK nucleoprotein	1	FSMPGFK	FSMPGFK	2	FSMPGFK2	20289.8	12638.8	22071.6
Q9R063	Q9R063	PRDX5_RAT	Prdx5	Peroxiredoxin-5, mitochondrial	1	FSMVIDK	FSMVIDK	2	FSMVIDK2	232727	183777	207144
P05065	P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	1	FSNEEIAMATVTALR	FSNEEIAMATVTALR	2	FSNEEIAMATVTALR2	436834	373605	381183
P05065	P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	1	FSNEEIAMATVTALR	FSNEEIAMATVTALR	3	FSNEEIAMATVTALR3	43882.5	43264.4	54047.5
P05065	P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	1	FSNEEIAMATVTALRR	FSNEEIAMATVTALRR	3	FSNEEIAMATVTALRR3	176858	174089	215082
A0A0G2JVT8	A0A8I6ARY9;A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	0	FSNETFR	FSNETFR	2	FSNETFR2	18538.8	19051.6	13526.2
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	FSNILDQVCIQCYK	FSNILDQVC(UniMod:4)IQC(UniMod:4)YK	2	FSNILDQVC(UniMod:4)IQC(UniMod:4)YK2	3123.03	8231.72	
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	FSNISAAK	FSNISAAK	1	FSNISAAK1	3191.46	1867.63	
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	FSNISAAK	FSNISAAK	2	FSNISAAK2	590143	570340	662278
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	FSNQGPLENDLVVHVALVAESQR	FSNQGPLENDLVVHVALVAESQR	3	FSNQGPLENDLVVHVALVAESQR3	6866.55	6357.25	5341.93
Q63493	Q63493	CD1D_RAT	Cd1d	Antigen-presenting glycoprotein CD1d	1	FSNQQWEK	FSNQQWEK	2	FSNQQWEK2	64434.4	57163.9	64591.3
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	FSNSMESLSSR	FSNSMESLSSR	2	FSNSMESLSSR2	12212.7	16459.3	12022.7
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	FSNTLELK	FSNTLELK	2	FSNTLELK2	40787.7	37463.2	38281.1
Q9EPH8	A0A8I5ZSJ2;B5DF80;Q9EPH8	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	0	FSPAGPILSIR	FSPAGPILSIR	2	FSPAGPILSIR2	182581	190882	213646
G3V9N0	G3V9N0	G3V9N0_RAT	Pabpc4	Polyadenylate-binding protein	1	FSPAGPVLSIR	FSPAGPVLSIR	2	FSPAGPVLSIR2	10447.4	8379.09	8189.85
Q5M9G8	Q5M9G8	DCA11_RAT	Dcaf11	DDB1- and CUL4-associated factor 11	1	FSPAHSTGQQFIYSGCSTGK	FSPAHSTGQQFIYSGC(UniMod:4)STGK	3	FSPAHSTGQQFIYSGC(UniMod:4)STGK3	12987.6	14433.8	17386.3
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	FSPAQQEK	FSPAQQEK	2	FSPAQQEK2	294782	301340	285508
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	FSPAVWDETCNCMLDIFR	FSPAVWDETC(UniMod:4)NC(UniMod:4)MLDIFR	3	FSPAVWDETC(UniMod:4)NC(UniMod:4)MLDIFR3	2556.56		
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	FSPDDELLASCSADGTLK	FSPDDELLASC(UniMod:4)SADGTLK	2	FSPDDELLASC(UniMod:4)SADGTLK2	6144.38	4058.83	5113.16
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	FSPDGEFFATAGK	FSPDGEFFATAGK	2	FSPDGEFFATAGK2	35680.6	48966.2	37100.6
Q5XIG8	Q5XIG8	STRAP_RAT	Strap	Serine-threonine kinase receptor-associated protein	1	FSPDGELYASGSEDGTLR	FSPDGELYASGSEDGTLR	2	FSPDGELYASGSEDGTLR2	30122.1	16098.3	10240.6
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	FSPDIFSSVSVPPSLK	FSPDIFSSVSVPPSLK	2	FSPDIFSSVSVPPSLK2	9222.56	6907.45	5473.09
P13264	P13264	GLSK_RAT	Gls	Glutaminase kidney isoform, mitochondrial	1	FSPDLWGVSVCTVDGQR	FSPDLWGVSVC(UniMod:4)TVDGQR	2	FSPDLWGVSVC(UniMod:4)TVDGQR2	10432	4577.54	3741.94
Q9Z2K5	Q9Z2K5	LST8_RAT	Mlst8	Target of rapamycin complex subunit LST8	1	FSPDSTLLATCSADQTCK	FSPDSTLLATC(UniMod:4)SADQTC(UniMod:4)K	3	FSPDSTLLATC(UniMod:4)SADQTC(UniMod:4)K3	1313.17	3449.17	3256.51
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	FSPEVPGQK	FSPEVPGQK	2	FSPEVPGQK2	22698.8	31897.2	20508.7
G3V9M3	G3V9M3	G3V9M3_RAT	Wdr47	WD repeat domain 47	1	FSPGAHYLLTGSYDMK	FSPGAHYLLTGSYDMK	3	FSPGAHYLLTGSYDMK3	3892.59	5158.17	5895.56
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	FSPGAPSGPGPQPSQK	FSPGAPSGPGPQPSQK	2	FSPGAPSGPGPQPSQK2	2.85819e+06	2.57236e+06	2.97412e+06
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	FSPGAPSGPGPQPSQK	FSPGAPSGPGPQPSQK	3	FSPGAPSGPGPQPSQK3	63735.8	51436.6	56118.6
P67999	P67999	KS6B1_RAT	Rps6kb1	Ribosomal protein S6 kinase beta-1	1	FSPGDFWGR	FSPGDFWGR	2	FSPGDFWGR2	18660.5	26018.3	16636.9
D3ZXK7	D3ZXK7	RN123_RAT	Rnf123	E3 ubiquitin-protein ligase RNF123	1	FSPIVPDLGLQIHYLR	FSPIVPDLGLQIHYLR	3	FSPIVPDLGLQIHYLR3	6673.17	3786.76	3957.97
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	FSPLMTAEALGTR	FSPLMTAEALGTR	2	FSPLMTAEALGTR2	58178.3	62820.5	48664
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	FSPLMTAEALGTR	FSPLMTAEALGTR	3	FSPLMTAEALGTR3	9508.91	8610.79	7729.79
Q06647	Q06647	ATPO_RAT	Atp5po	ATP synthase subunit O, mitochondrial	1	FSPLTANLMNLLAENGR	FSPLTANLMNLLAENGR	2	FSPLTANLMNLLAENGR2	48988.5	66546.7	30034.1
Q06647	Q06647	ATPO_RAT	Atp5po	ATP synthase subunit O, mitochondrial	1	FSPLTANLMNLLAENGR	FSPLTANLMNLLAENGR	3	FSPLTANLMNLLAENGR3	52035.9	54717.6	61986.2
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	FSPNMTER	FSPNMTER	2	FSPNMTER2	75418.9	61991.3	72242.9
P63245	P63245	RACK1_RAT	Rack1	Small ribosomal subunit protein RACK1	1	FSPNSSNPIIVSCGWDK	FSPNSSNPIIVSC(UniMod:4)GWDK	2	FSPNSSNPIIVSC(UniMod:4)GWDK2	17037.7	11440.8	14569.7
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	FSPPEETGLSR	FSPPEETGLSR	2	FSPPEETGLSR2	176906	206306	193363
B5DFI9	B5DFI9	B5DFI9_RAT	Pdk3	Protein-serine/threonine kinase	1	FSPSPLSIK	FSPSPLSIK	2	FSPSPLSIK2	35607.4	32309.4	23478.4
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	FSPTDFLAK	FSPTDFLAK	2	FSPTDFLAK2	22862.7	32517.3	35956.2
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	FSPTMGR	FSPTMGR	2	FSPTMGR2	61870.9	71437	57373.4
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	FSPTVSQNHR	FSPTVSQNHR	2	FSPTVSQNHR2	4531.16	7628.63	
Q5RJK9	Q5RJK9	Q5RJK9_RAT	Polr1c	DNA-directed RNA polymerases I and III subunit RPAC1	1	FSPVATASYR	FSPVATASYR	2	FSPVATASYR2	10471.3	9701.61	12811.4
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	FSPVLIR	FSPVLIR	2	FSPVLIR2	35100.4	44439.8	29430.6
P18421	P18421	PSB1_RAT	Psmb1	Proteasome subunit beta type-1	1	FSPYAFNGGTVLAIAGEDFSIVASDTR	FSPYAFNGGTVLAIAGEDFSIVASDTR	3	FSPYAFNGGTVLAIAGEDFSIVASDTR3		8511.61	10161.4
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	FSPYCLCDCAELDR	FSPYC(UniMod:4)LC(UniMod:4)DC(UniMod:4)AELDR	2	FSPYC(UniMod:4)LC(UniMod:4)DC(UniMod:4)AELDR2	6394.33	2562.31	5084.34
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	FSQALLK	FSQALLK	2	FSQALLK2	15518.3	15016.6	16461.8
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	FSQEAINSGR	FSQEAINSGR	2	FSQEAINSGR2	71771.8	74293.6	57405
A0A8I6ASC6	A0A8I6ASC6	A0A8I6ASC6_RAT	Igdcc4	Immunoglobulin superfamily, DCC subclass, member 4	1	FSQEALLSVALR	FSQEALLSVALR	2	FSQEALLSVALR2	4621.12		3785.72
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	FSQEIDIQK	FSQEIDIQK	2	FSQEIDIQK2	40075.3	41516	51751.9
D4ADQ1	D4ADQ1	D4ADQ1_RAT	Rrm2b	Ribonucleotide reductase regulatory TP53 inducible subunit M2B	1	FSQEVQVPEAR	FSQEVQVPEAR	2	FSQEVQVPEAR2	45279.5	35952	49655.8
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	FSQFLEK	FSQFLEK	2	FSQFLEK2	214484	211395	206507
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	FSQGVEVR	FSQGVEVR	2	FSQGVEVR2	30918.7	41889.7	30668.1
P29418	P29418;M0R601	ATP5E_RAT	Atp5f1e	ATP synthase subunit epsilon, mitochondrial	0	FSQICAK	FSQIC(UniMod:4)AK	1	FSQIC(UniMod:4)AK1	7998.49	9794.78	8983.69
P29418	P29418;M0R601	ATP5E_RAT	Atp5f1e	ATP synthase subunit epsilon, mitochondrial	0	FSQICAK	FSQIC(UniMod:4)AK	2	FSQIC(UniMod:4)AK2	586597	632081	611577
A0A0G2K5E4	A0A0G2K5E4	A0A0G2K5E4_RAT	Dnaja3	DnaJ heat shock protein family (Hsp40) member A3	1	FSQLAEAYEVLSDEVKR	FSQLAEAYEVLSDEVKR	3	FSQLAEAYEVLSDEVKR3	4239.8	7178.41	6861.4
Q4V885	Q4V885	COL12_RAT	Colec12	Collectin-12	1	FSQLEER	FSQLEER	2	FSQLEER2	11788.7	8120.53	3990.89
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	FSQLLEEK	FSQLLEEK	2	FSQLLEEK2	24358.5	18560.8	25556.4
D4A8B0	D4A8B0	D4A8B0_RAT	Sec14l5	SEC14-like lipid binding 5	1	FSQLSATTTSSSSGQSHSGSMVSR	FSQLSATTTSSSSGQSHSGSMVSR	3	FSQLSATTTSSSSGQSHSGSMVSR3	4701.56	5436.01	4489.72
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	FSQLVMNR	FSQLVMNR	2	FSQLVMNR2	4438.83	6344.49	6938.77
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	FSQMLHPIFEEASDVIK	FSQMLHPIFEEASDVIK	3	FSQMLHPIFEEASDVIK3	37529.2	61256.2	68428.3
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	FSQMLHPIFEEASDVIKEEYPDK	FSQMLHPIFEEASDVIKEEYPDK	3	FSQMLHPIFEEASDVIKEEYPDK3	25391	19133.6	19394.7
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	FSQMLHPIFEEASDVIKEEYPDK	FSQMLHPIFEEASDVIKEEYPDK	4	FSQMLHPIFEEASDVIKEEYPDK4	88269.6	52713.9	51459.2
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	FSQPLHEEIALHK	FSQPLHEEIALHK	3	FSQPLHEEIALHK3	10045.8		6148.46
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	FSQPLHEEIALHK	FSQPLHEEIALHK	4	FSQPLHEEIALHK4	16282.9	14023.9	15028.7
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	FSQPLHEEIALHKR	FSQPLHEEIALHKR	4	FSQPLHEEIALHKR4		2910.41	4419.99
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	FSQWLDDHPSEKDR	FSQWLDDHPSEKDR	3	FSQWLDDHPSEKDR3	18275.6	11262.4	4757.02
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	FSQWLDDHPSEKDR	FSQWLDDHPSEKDR	4	FSQWLDDHPSEKDR4	16965.8	16941.7	22080.4
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	FSREEFPTLQAAGDQDK	FSREEFPTLQAAGDQDK	3	FSREEFPTLQAAGDQDK3	6696.23	8801.25	10717.3
Q8R4G8	Q8R4G8	KCTD1_RAT	Kctd1	BTB/POZ domain-containing protein KCTD1	1	FSRPCECLVVR	FSRPC(UniMod:4)EC(UniMod:4)LVVR	3	FSRPC(UniMod:4)EC(UniMod:4)LVVR3	4782.99	5709.86	
A0A8I5Y8H6	A0A8I5Y8H6	A0A8I5Y8H6_RAT	Psd3	Pleckstrin and Sec7 domain containing 3	1	FSRPLLPATTTK	FSRPLLPATTTK	3	FSRPLLPATTTK3	6945.07	8309.45	5679.13
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	FSRPSYYLDCPELTELGSR	FSRPSYYLDC(UniMod:4)PELTELGSR	3	FSRPSYYLDC(UniMod:4)PELTELGSR3	12196.1	5817.12	7502.99
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	FSRPVYCNLCELSIGLGK	FSRPVYC(UniMod:4)NLC(UniMod:4)ELSIGLGK	3	FSRPVYC(UniMod:4)NLC(UniMod:4)ELSIGLGK3	11426.5	5364.38	5820.67
P53987	P53987	MOT1_RAT	Slc16a1	Monocarboxylate transporter 1	1	FSSAVGLVTIVECCPVLLGPPLLGR	FSSAVGLVTIVEC(UniMod:4)C(UniMod:4)PVLLGPPLLGR	3	FSSAVGLVTIVEC(UniMod:4)C(UniMod:4)PVLLGPPLLGR3	7304.18	5758.87	
Q62656	Q62656	PTPRZ_RAT	Ptprz1	Receptor-type tyrosine-protein phosphatase zeta	1	FSSFEETVK	FSSFEETVK	2	FSSFEETVK2	41459.2	50884.1	30888
Q8CIZ5	F1LVL9;Q8CIZ5	DMBT1_RAT	Dmbt1	Deleted in malignant brain tumors 1 protein	0	FSSFHFLNR	FSSFHFLNR	2	FSSFHFLNR2	97234.9	115642	67268.4
Q8CIZ5	F1LVL9;Q8CIZ5	DMBT1_RAT	Dmbt1	Deleted in malignant brain tumors 1 protein	0	FSSFHFLNR	FSSFHFLNR	3	FSSFHFLNR3	965320	1.11772e+06	1.03044e+06
A0A8I6AAY1	A0A8I6AAY1	A0A8I6AAY1_RAT	Cox7a2l	Cytochrome c oxidase subunit 7A2 like	1	FSSFTQK	FSSFTQK	2	FSSFTQK2	76395	83672	84727.9
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	FSSILCR	FSSILC(UniMod:4)R	2	FSSILC(UniMod:4)R2	53865.9	43338.6	38234.9
D3ZY16	D3ZY16	D3ZY16_RAT	Trim65	Tripartite motif-containing 65	1	FSSLLQVLEK	FSSLLQVLEK	2	FSSLLQVLEK2		1006.52	1008.69
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	FSSLNQK	FSSLNQK	2	FSSLNQK2	108945	107552	96396.6
P48450	P48450	LSS_RAT	Lss	Lanosterol synthase	1	FSSLYPDNTLAGHI	FSSLYPDNTLAGHI	2	FSSLYPDNTLAGHI2	8738.71	11251.4	16617.7
P32198	P32198	CPT1A_RAT	Cpt1a	Carnitine O-palmitoyltransferase 1, liver isoform	1	FSSPETDSHR	FSSPETDSHR	3	FSSPETDSHR3	7643.25	14491.2	13197.9
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	FSSPSSDADVHVLVR	FSSPSSDADVHVLVR	3	FSSPSSDADVHVLVR3	17741.2	24899.1	15313.5
D4A5U3	D4A5U3	TGM3_RAT	Tgm3	Protein-glutamine gamma-glutamyltransferase E	1	FSSQDFIVR	FSSQDFIVR	2	FSSQDFIVR2	5265.89	11090.7	14406.3
P14882	P14882	PCCA_RAT	Pcca	Propionyl-CoA carboxylase alpha chain, mitochondrial	1	FSSQEAASSFGDDR	FSSQEAASSFGDDR	2	FSSQEAASSFGDDR2	9709.12	12648.5	10535.6
D3ZP82	D3ZP82	D3ZP82_RAT	Loxl3	Lysyl oxidase homolog	1	FSSQIHNLGR	FSSQIHNLGR	3	FSSQIHNLGR3	19348.6	19304.5	10489.8
B2RYW9	B2RYW9	FAHD2_RAT	Fahd2	Fumarylacetoacetate hydrolase domain-containing protein 2	1	FSSSIVGPYDSIILPPESK	FSSSIVGPYDSIILPPESK	3	FSSSIVGPYDSIILPPESK3	15730.8	18447.7	21541.9
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	FSSSTANR	FSSSTANR	2	FSSSTANR2			64406.6
D3ZLK1	D3ZLK1	D3ZLK1_RAT	Gcsam	Germinal center-associated, signaling and motility	1	FSSTSQPLPSTEDEYELLVPSR	FSSTSQPLPSTEDEYELLVPSR	3	FSSTSQPLPSTEDEYELLVPSR3	84364.4	69429.2	87738.7
Q9Z1N3	Q9Z1N3	MYO9A_RAT	Myo9a	Unconventional myosin-IXa	1	FSSVDEQAR	FSSVDEQAR	2	FSSVDEQAR2	3002.1	2864.36	
D3ZQ80	D3ZQ80	D3ZQ80_RAT	Smg8	Nonsense-mediated mRNA decay factor SMG8	1	FSSWSLVK	FSSWSLVK	2	FSSWSLVK2	11663		8837.03
D3ZLK1	D3ZLK1	D3ZLK1_RAT	Gcsam	Germinal center-associated, signaling and motility	1	FSSYANQQPQPLTAPFETHFSHLQ	FSSYANQQPQPLTAPFETHFSHLQ	3	FSSYANQQPQPLTAPFETHFSHLQ3	34316.5	34909.4	36892.4
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	FSSYREDVLK	FSSYREDVLK	3	FSSYREDVLK3	11480.5	22099.4	13770.5
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	FSTAFCSVNDWK	FSTAFC(UniMod:4)SVNDWK	2	FSTAFC(UniMod:4)SVNDWK2	69760.8	71659.6	53050.1
Q91ZW1	Q91ZW1	TFAM_RAT	Tfam	Transcription factor A, mitochondrial	1	FSTEQLPK	FSTEQLPK	2	FSTEQLPK2	23393	14374.2	12232.8
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	FSTETTFLVDK	FSTETTFLVDK	2	FSTETTFLVDK2	61951.6	50594.7	75248.3
B1WC91	B1WC91	B1WC91_RAT	C1qtnf3	C1q and TNF related 3	1	FSTFAGFLLFETK	FSTFAGFLLFETK	2	FSTFAGFLLFETK2	206557	203914	178227
B1WC91	B1WC91	B1WC91_RAT	C1qtnf3	C1q and TNF related 3	1	FSTFAGFLLFETK	FSTFAGFLLFETK	3	FSTFAGFLLFETK3	47109.1	44798.6	44651.3
G3V6A9	G3V6A9	G3V6A9_RAT	Mfap4	Microfibril-associated glycoprotein 4-like	1	FSTFDRDQDLFVQNCAALSSGAFWFR	FSTFDRDQDLFVQNC(UniMod:4)AALSSGAFWFR	4	FSTFDRDQDLFVQNC(UniMod:4)AALSSGAFWFR4	94196.8	69137.7	64166.3
Q62833	Q62833	GRK5_RAT	Grk5	G protein-coupled receptor kinase 5	1	FSTGSVPIPWQNEMIETECFK	FSTGSVPIPWQNEMIETEC(UniMod:4)FK	3	FSTGSVPIPWQNEMIETEC(UniMod:4)FK3	2887.68	6296.47	3029.54
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	FSTLTDEPSPR	FSTLTDEPSPR	2	FSTLTDEPSPR2	91479.3	86731.1	84169.5
B2RZ33	B2RZ33	B2RZ33_RAT	Nck1	Cytoplasmic protein	1	FSTMEELVEHYK	FSTMEELVEHYK	3	FSTMEELVEHYK3	17865.7	8142.77	16509
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	FSTPDAAPVSTEPAWLALAK	FSTPDAAPVSTEPAWLALAK	3	FSTPDAAPVSTEPAWLALAK3	30358.6	19452.7	38822.4
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	FSTPEFTLLNTFR	FSTPEFTLLNTFR	2	FSTPEFTLLNTFR2	446988	453368	468882
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	FSTPEFTLLNTFR	FSTPEFTLLNTFR	3	FSTPEFTLLNTFR3	23426.8	34252.3	28808.3
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	FSTSVKPDVVVQVAVLAENSHIK	FSTSVKPDVVVQVAVLAENSHIK	3	FSTSVKPDVVVQVAVLAENSHIK3	2645.02	3797.83	
P04762	P04762	CATA_RAT	Cat	Catalase	1	FSTVAGESGSADTVRDPR	FSTVAGESGSADTVRDPR	3	FSTVAGESGSADTVRDPR3	19403.3	23436.4	22513.1
A0A8I6GHU4	A0A8I6GHU4	A0A8I6GHU4_RAT	ENSRNOG00000066358	Nuclear export mediator factor	1	FSTVDLR	FSTVDLR	2	FSTVDLR2	39146.2	47251	40383
Q6U6G5	Q6U6G5;D4AA59	ZC3HF_RAT	Zc3h15	Zinc finger CCCH domain-containing protein 15	0	FSTYASDKDENK	FSTYASDKDENK	3	FSTYASDKDENK3	19134.3	27690.9	22239.8
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	FSVADGHVDAYSTSAVLR	FSVADGHVDAYSTSAVLR	3	FSVADGHVDAYSTSAVLR3	37395.3	34810.8	36298.2
P01048	P08932;A0A0G2KA54;P01048	KNT1_RAT	Map1	T-kininogen 1	0	FSVATQICNITPGK	FSVATQIC(UniMod:4)NITPGK	2	FSVATQIC(UniMod:4)NITPGK2	453900	423544	383888
P01048	P08932;A0A0G2KA54;P01048	KNT1_RAT	Map1	T-kininogen 1	0	FSVATQICNITPGK	FSVATQIC(UniMod:4)NITPGK	3	FSVATQIC(UniMod:4)NITPGK3	39968.4	30636.1	35942.2
P01048	P08932;A0A0G2KA54;P01048	KNT1_RAT	Map1	T-kininogen 1	0	FSVATQICNITPGKGPK	FSVATQIC(UniMod:4)NITPGKGPK	2	FSVATQIC(UniMod:4)NITPGKGPK2	7941.15	4909.89	8847.92
P01048	P08932;A0A0G2KA54;P01048	KNT1_RAT	Map1	T-kininogen 1	0	FSVATQICNITPGKGPK	FSVATQIC(UniMod:4)NITPGKGPK	3	FSVATQIC(UniMod:4)NITPGKGPK3	93708.5	96012.3	96098.5
P62907	A0A8I5ZRG4;A0A8I6A8X9;D3Z9F6;A0A8I5Y9H0;P62907;A0A8I5ZVS9;A0A8I5ZRE5	RL10A_RAT	Rpl10a	Large ribosomal subunit protein uL1	0	FSVCVLGDQQHCDEAK	FSVC(UniMod:4)VLGDQQHC(UniMod:4)DEAK	2	FSVC(UniMod:4)VLGDQQHC(UniMod:4)DEAK2	3464.84		3208.7
P62907	A0A8I5ZRG4;A0A8I6A8X9;D3Z9F6;A0A8I5Y9H0;P62907;A0A8I5ZVS9;A0A8I5ZRE5	RL10A_RAT	Rpl10a	Large ribosomal subunit protein uL1	0	FSVCVLGDQQHCDEAK	FSVC(UniMod:4)VLGDQQHC(UniMod:4)DEAK	3	FSVC(UniMod:4)VLGDQQHC(UniMod:4)DEAK3	54496.8	42009.6	37017.5
A0A8I5ZL85	A0A8I5ZL85	A0A8I5ZL85_RAT	Ackr1	Atypical chemokine receptor 1	1	FSVDNSR	FSVDNSR	2	FSVDNSR2	29096.9	14930.6	21057.9
P13721	P13721	SIAT1_RAT	St6gal1	Beta-galactoside alpha-2,6-sialyltransferase 1	1	FSVEALR	FSVEALR	2	FSVEALR2	19557	28005.8	19004.5
Q64361	Q64361	LXN_RAT	Lxn	Latexin	1	FSVEEIIQK	FSVEEIIQK	2	FSVEEIIQK2	20985.4	22646.7	21150
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	FSVGDAK	FSVGDAK	1	FSVGDAK1	11369.8	14336.5	9039
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	FSVGFSPASAER	FSVGFSPASAER	2	FSVGFSPASAER2	18834.6	16608.8	14252.8
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	FSVGGMTDVAEIK	FSVGGMTDVAEIK	2	FSVGGMTDVAEIK2	183000	195575	221860
Q9ES71	Q9ES71	GNPAT_RAT	Gnpat	Dihydroxyacetone phosphate acyltransferase	1	FSVGSASPSSVLLYAK	FSVGSASPSSVLLYAK	2	FSVGSASPSSVLLYAK2	4457.73		1813.04
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	FSVHQQSEMDTSVK	FSVHQQSEMDTSVK	2	FSVHQQSEMDTSVK2	2224.62	1979.86	3260.89
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	FSVHQQSEMDTSVK	FSVHQQSEMDTSVK	3	FSVHQQSEMDTSVK3	71408.6	69597.5	87852.4
D4A6U4	D4A6U4	D4A6U4_RAT	Tecpr2	Tectonin beta-propeller repeat containing 2	1	FSVISSEDFDQELIVKPIK	FSVISSEDFDQELIVKPIK	3	FSVISSEDFDQELIVKPIK3	5276.17	8292.53	3706.2
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	FSVLEGQR	FSVLEGQR	2	FSVLEGQR2	16815.9	12815.8	20552.3
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	FSVLELQEYLDTYNNRK	FSVLELQEYLDTYNNRK	3	FSVLELQEYLDTYNNRK3	26432.9	18437.9	25425.9
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	FSVLITGLR	FSVLITGLR	2	FSVLITGLR2	245458	330555	309017
E9PU10	E9PU10	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	1	FSVNDALLAQK	FSVNDALLAQK	2	FSVNDALLAQK2	49900.6	48966.8	43895.1
Q32PX2	Q32PX2	AIMP2_RAT	Aimp2	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2	1	FSVQTMCPIEGEGNIAR	FSVQTMC(UniMod:4)PIEGEGNIAR	2	FSVQTMC(UniMod:4)PIEGEGNIAR2	31886.7	30714.7	30696.6
Q32PX2	Q32PX2	AIMP2_RAT	Aimp2	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2	1	FSVQTMCPIEGEGNIAR	FSVQTMC(UniMod:4)PIEGEGNIAR	3	FSVQTMC(UniMod:4)PIEGEGNIAR3	5950.56	12109.2	4047.19
P08650	P08650	CO5_RAT	C5	Complement C5	1	FSVSIEPESNFIGYK	FSVSIEPESNFIGYK	2	FSVSIEPESNFIGYK2	198084	153423	141794
P08650	P08650	CO5_RAT	C5	Complement C5	1	FSVSIEPESNFIGYK	FSVSIEPESNFIGYK	3	FSVSIEPESNFIGYK3	23931.8	17733.8	19242.8
D4A1R8	D4A1R8	CPNE1_RAT	Cpne1	Copine-1	1	FSVSLQHFCGGDLNTPIQVR	FSVSLQHFC(UniMod:4)GGDLNTPIQVR	3	FSVSLQHFC(UniMod:4)GGDLNTPIQVR3	12871.3	14695.5	7347.61
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	FSVSPVVR	FSVSPVVR	2	FSVSPVVR2	195607	187372	204616
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	FSVTAEGGLTLEQVTDAR	FSVTAEGGLTLEQVTDAR	2	FSVTAEGGLTLEQVTDAR2	8324.63	9822.13	8616.74
P47967	P47967	LEG5_RAT	Lgals5	Galectin-5	1	FSVWILCEGHCFK	FSVWILC(UniMod:4)EGHC(UniMod:4)FK	3	FSVWILC(UniMod:4)EGHC(UniMod:4)FK3	2035.51	2899.53	2563.32
Q64270	Q64270	EI2BA_RAT	Eif2b1	Translation initiation factor eIF-2B subunit alpha	1	FSVYITESQPDLSGK	FSVYITESQPDLSGK	2	FSVYITESQPDLSGK2	16292.4	7318.32	11171.7
P20760	P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	1	FSWFIDDVEVHTAQTHAPEK	FSWFIDDVEVHTAQTHAPEK	3	FSWFIDDVEVHTAQTHAPEK3	210299	166380	169549
P20760	P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	1	FSWFIDDVEVHTAQTHAPEK	FSWFIDDVEVHTAQTHAPEK	4	FSWFIDDVEVHTAQTHAPEK4	163792	130404	125398
B5DFC3	B5DFC3;D3ZCT7	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	0	FSWNVWPSSR	FSWNVWPSSR	2	FSWNVWPSSR2	46514	45170.9	39024
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	FSYALAR	FSYALAR	2	FSYALAR2	12105.5	16027	13691.8
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	FSYDSSNPVYFHGYR	FSYDSSNPVYFHGYR	2	FSYDSSNPVYFHGYR2	141471	144712	152103
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	FSYDSSNPVYFHGYR	FSYDSSNPVYFHGYR	3	FSYDSSNPVYFHGYR3	1.97825e+06	2.05225e+06	2.20975e+06
A0A8I5Y176	A0A8I5Y176	A0A8I5Y176_RAT	Ranbp9	RAN binding protein 9	1	FSYIGLSQNNLR	FSYIGLSQNNLR	2	FSYIGLSQNNLR2	6211.75		7413.37
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	FSYLAVIEGAK	FSYLAVIEGAK	2	FSYLAVIEGAK2	134518	135711	137503
D3ZVC4	D3ZVC4	D3ZVC4_RAT	Arel1	Apoptosis resistant E3 ubiquitin protein ligase 1	1	FSYLGPDPVHK	FSYLGPDPVHK	3	FSYLGPDPVHK3	3118.84	6920.41	7912.85
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	FSYLPIQK	FSYLPIQK	2	FSYLPIQK2	654864	678097	728722
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	FSYNLGSGTYK	FSYNLGSGTYK	2	FSYNLGSGTYK2	2220.52	6755.12	
P58751	P58751	RELN_RAT	Reln	Reelin	1	FSYSDPSIIVSYAK	FSYSDPSIIVSYAK	2	FSYSDPSIIVSYAK2	70463.8	91202.6	74294
P58751	P58751	RELN_RAT	Reln	Reelin	1	FSYSDPSIIVSYAK	FSYSDPSIIVSYAK	3	FSYSDPSIIVSYAK3	5694.24	9472.78	
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	FSYVTPR	FSYVTPR	2	FSYVTPR2	183974	245030	226367
P36953	P36953	AFAM_RAT	Afm	Afamin	1	FTAAGEECGNIQKPEACFSPESSK	FTAAGEEC(UniMod:4)GNIQKPEAC(UniMod:4)FSPESSK	3	FTAAGEEC(UniMod:4)GNIQKPEAC(UniMod:4)FSPESSK3	142607	130132	137333
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	FTAEIYK	FTAEIYK	1	FTAEIYK1	1898.83		
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	FTAEIYK	FTAEIYK	2	FTAEIYK2	114843	95283.1	100057
D4A224	D4A224	D4A224_RAT	Ric1	Protein RIC1 homolog	1	FTAEQLHGVWPQDVVDGTCVAVNNK	FTAEQLHGVWPQDVVDGTC(UniMod:4)VAVNNK	3	FTAEQLHGVWPQDVVDGTC(UniMod:4)VAVNNK3	2771.87	3937.27	
F1MAF8	F1MAF8	F1MAF8_RAT	Atg2b	Autophagy related 2B	1	FTAEVPIR	FTAEVPIR	2	FTAEVPIR2	8550.33	6097.99	12592.4
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	FTAFYASR	FTAFYASR	2	FTAFYASR2	141956	179893	141942
Q6P503	Q6P503	Q6P503_RAT	Atp6v1d	V-type proton ATPase subunit D	1	FTAGDFSTTVIQNVNK	FTAGDFSTTVIQNVNK	2	FTAGDFSTTVIQNVNK2	5259.9	7023.45	6540.12
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	FTANDLENLLLLNDTWK	FTANDLENLLLLNDTWK	3	FTANDLENLLLLNDTWK3	2651.16	2795.85	
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	FTAQGLPDLNHSQVYAVK	FTAQGLPDLNHSQVYAVK	3	FTAQGLPDLNHSQVYAVK3	23603.1	24338.3	27926.6
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	FTARPLVETIFER	FTARPLVETIFER	3	FTARPLVETIFER3	72401.1	101199	97690.8
P46844	P46844	BIEA_RAT	Blvra	Biliverdin reductase A	1	FTASPLEEER	FTASPLEEER	2	FTASPLEEER2	7271.58	6871.12	8305.56
P04764	M0R5J4;A0A8I6GJ97;A0A8I6ASH7;P04764	ENOA_RAT	Eno1	Alpha-enolase	0	FTATAGIQVVGDDLTVTNPK	FTATAGIQVVGDDLTVTNPK	3	FTATAGIQVVGDDLTVTNPK3	84264.1	61516.7	77434.4
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	FTATASLGVIHK	FTATASLGVIHK	2	FTATASLGVIHK2	3200.12	3555.69	4664.73
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	FTATASLGVIHK	FTATASLGVIHK	3	FTATASLGVIHK3	43195.9	36843.1	51973.2
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	FTAVEDQYYCVDCYK	FTAVEDQYYC(UniMod:4)VDC(UniMod:4)YK	3	FTAVEDQYYC(UniMod:4)VDC(UniMod:4)YK3	6469.28	10036.6	11328.3
A0A8I6ALT5	A0A8I6ALT5	A0A8I6ALT5_RAT	Dok2	Docking protein 2	1	FTAVLYGESGCALAR	FTAVLYGESGC(UniMod:4)ALAR	2	FTAVLYGESGC(UniMod:4)ALAR2	19486.5	21059.7	16459.1
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	FTAVYDAGSPGHMCDGR	FTAVYDAGSPGHMC(UniMod:4)DGR	2	FTAVYDAGSPGHMC(UniMod:4)DGR2		1434.72	1591.14
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	FTAVYDAGSPGHMCDGR	FTAVYDAGSPGHMC(UniMod:4)DGR	3	FTAVYDAGSPGHMC(UniMod:4)DGR3	18701.3	23502.2	9447.87
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	FTCACPDGMLLAK	FTC(UniMod:4)AC(UniMod:4)PDGMLLAK	2	FTC(UniMod:4)AC(UniMod:4)PDGMLLAK2	77002.7	106099	69963.5
A0A0G2JU49	A0A0G2JU49	A0A0G2JU49_RAT	Mtx1	Metaxin 1	1	FTCAPLK	FTC(UniMod:4)APLK	2	FTC(UniMod:4)APLK2	92003.6	80882.7	79494
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	FTCDIQK	FTC(UniMod:4)DIQK	2	FTC(UniMod:4)DIQK2	131029	140801	134023
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	FTCDVETLK	FTC(UniMod:4)DVETLK	2	FTC(UniMod:4)DVETLK2	8865.49	8567.59	9666.75
B2RYD0	B2RYD0	B2RYD0_RAT	Ube2g2	Ubiquitin-conjugating enzyme E2G 2	1	FTCEMFHPNIYPDGR	FTC(UniMod:4)EMFHPNIYPDGR	3	FTC(UniMod:4)EMFHPNIYPDGR3	31554.7	26867.3	32503.1
Q63450	Q63450	KCC1A_RAT	Camk1	Calcium/calmodulin-dependent protein kinase type 1	1	FTCEQALQHPWIAGDTALDK	FTC(UniMod:4)EQALQHPWIAGDTALDK	3	FTC(UniMod:4)EQALQHPWIAGDTALDK3	11271.7	13622.5	7944.12
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	FTCEVSGIPKPEVGWFLEGIPVR	FTC(UniMod:4)EVSGIPKPEVGWFLEGIPVR	3	FTC(UniMod:4)EVSGIPKPEVGWFLEGIPVR3	39339.1	50866	44061.2
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	FTCPFVEK	FTC(UniMod:4)PFVEK	2	FTC(UniMod:4)PFVEK2	36928.7	52385.8	48353.7
Q5FVH0	Q5FVH0	C1QT5_RAT	C1qtnf5	Complement C1q tumor necrosis factor-related protein 5	1	FTCQVPGVYYFAVHATVYR	FTC(UniMod:4)QVPGVYYFAVHATVYR	3	FTC(UniMod:4)QVPGVYYFAVHATVYR3		8708	
Q6AZ45	Q6AZ45	Q6AZ45_RAT	Fcer2	Fc fragment of IgE receptor II	1	FTCSDLEGR	FTC(UniMod:4)SDLEGR	2	FTC(UniMod:4)SDLEGR2	11760.4	9801.26	5590.84
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	FTCSDSQVNSR	FTC(UniMod:4)SDSQVNSR	2	FTC(UniMod:4)SDSQVNSR2	11938.9	11090	11191.9
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	FTCTVNR	FTC(UniMod:4)TVNR	2	FTC(UniMod:4)TVNR2	83701.2	90441.1	76262.3
Q5U2R3	Q5U2R3	FRMD8_RAT	Frmd8	FERM domain-containing protein 8	1	FTDASDDDIAMDEPSLQFR	FTDASDDDIAMDEPSLQFR	3	FTDASDDDIAMDEPSLQFR3		7977.58	11530.1
Q5XI73	Q5XI73	GDIR1_RAT	Arhgdia	Rho GDP-dissociation inhibitor 1	1	FTDDDKTDHLSWEWNLTIK	FTDDDKTDHLSWEWNLTIK	4	FTDDDKTDHLSWEWNLTIK4	3595.09	3451.71	
P35284	P35284	RAB12_RAT	Rab12	Ras-related protein Rab-12	1	FTDDTFCEACK	FTDDTFC(UniMod:4)EAC(UniMod:4)K	2	FTDDTFC(UniMod:4)EAC(UniMod:4)K2	23090.3	20336.4	24366.3
Q5EB77	Q5EB77	RAB18_RAT	Rab18	Ras-related protein Rab-18	1	FTDDTFDPELAATIGVDFK	FTDDTFDPELAATIGVDFK	3	FTDDTFDPELAATIGVDFK3	8220.45	4357.72	11261.7
P11730	P11730	KCC2G_RAT	Camk2g	Calcium/calmodulin-dependent protein kinase type II subunit gamma	1	FTDDYQLFEELGK	FTDDYQLFEELGK	2	FTDDYQLFEELGK2	23006.6	15428.2	17785.5
P13832	P13832;P18666	MRLCA_RAT	Rlc-a	Myosin regulatory light chain RLC-A	0	FTDEEVDELYR	FTDEEVDELYR	2	FTDEEVDELYR2	893519	945652	1.04174e+06
P13832	P13832;P18666	MRLCA_RAT	Rlc-a	Myosin regulatory light chain RLC-A	0	FTDEEVDELYR	FTDEEVDELYR	3	FTDEEVDELYR3	18267.1	19078.4	23689.1
P13832	P13832;P18666	MRLCA_RAT	Rlc-a	Myosin regulatory light chain RLC-A	0	FTDEEVDELYREAPIDK	FTDEEVDELYREAPIDK	3	FTDEEVDELYREAPIDK3	46201.3	51748.8	42745.3
P13832	P13832;P18666	MRLCA_RAT	Rlc-a	Myosin regulatory light chain RLC-A	0	FTDEEVDELYREAPIDKK	FTDEEVDELYREAPIDKK	4	FTDEEVDELYREAPIDKK4	7242.88	6834.78	15541.3
Q64122	Q64122	MYL9_RAT	Myl9	Myosin regulatory light polypeptide 9	1	FTDEEVDEMYR	FTDEEVDEMYR	2	FTDEEVDEMYR2	1.67693e+06	1.8847e+06	1.90944e+06
Q64122	Q64122	MYL9_RAT	Myl9	Myosin regulatory light polypeptide 9	1	FTDEEVDEMYR	FTDEEVDEMYR	3	FTDEEVDEMYR3	7831.68	10641	11305.5
D4A7R3	D4A7R3	D4A7R3_RAT	Nup205	Nucleoporin 205	1	FTDELMEQGLTYK	FTDELMEQGLTYK	2	FTDELMEQGLTYK2	6775.13	4414.71	
P39052	P39052;Q08877	DYN2_RAT	Dnm2	Dynamin-2	0	FTDFDEVR	FTDFDEVR	2	FTDFDEVR2	40817.3	30481.6	44211.6
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	FTDFDEVRQEIEAETDR	FTDFDEVRQEIEAETDR	3	FTDFDEVRQEIEAETDR3	19419.7	24046.6	20050.9
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	FTDFQPFCCSETGPR	FTDFQPFC(UniMod:4)C(UniMod:4)SETGPR	2	FTDFQPFC(UniMod:4)C(UniMod:4)SETGPR2	24813.7	27169.2	25232
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	FTDFQPFCCSETGPR	FTDFQPFC(UniMod:4)C(UniMod:4)SETGPR	3	FTDFQPFC(UniMod:4)C(UniMod:4)SETGPR3	1712.47	3936.69	
A0A8I6AEI3	A0A8I6AEI3	A0A8I6AEI3_RAT	Wwox	WW domain-containing oxidoreductase	1	FTDINDSSGK	FTDINDSSGK	2	FTDINDSSGK2	11517.8	10261.5	20304.2
P06759	P06759	APOC3_RAT	Apoc3	Apolipoprotein C-III	1	FTDKFTGLWESGPEDQLTTPTLEP	FTDKFTGLWESGPEDQLTTPTLEP	3	FTDKFTGLWESGPEDQLTTPTLEP3	17986.4	43033.4	32758.2
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	FTDLFEK	FTDLFEK	2	FTDLFEK2	99646.6	60382.5	64423.4
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	FTDQSLSPEDAESLSVLSVVSPDTTK	FTDQSLSPEDAESLSVLSVVSPDTTK	3	FTDQSLSPEDAESLSVLSVVSPDTTK3	1713.16	6226.96	2343.82
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	FTDSAIAMNSK	FTDSAIAMNSK	2	FTDSAIAMNSK2	9569.54	6035.1	9450.43
P36953	P36953	AFAM_RAT	Afm	Afamin	1	FTDSENVCQER	FTDSENVC(UniMod:4)QER	2	FTDSENVC(UniMod:4)QER2	315994	318090	290987
P36953	P36953	AFAM_RAT	Afm	Afamin	1	FTDSENVCQERDSEQDK	FTDSENVC(UniMod:4)QERDSEQDK	3	FTDSENVC(UniMod:4)QERDSEQDK3	15184.6	9653.56	21789.8
Q6P752	Q6P752	TOIP2_RAT	Tor1aip2	Torsin-1A-interacting protein 2	1	FTDSGTPSSFSHMDSDK	FTDSGTPSSFSHMDSDK	3	FTDSGTPSSFSHMDSDK3	23360.3	13464.8	15797.8
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	FTDVAEIPAWVYLLK	FTDVAEIPAWVYLLK	2	FTDVAEIPAWVYLLK2	3803.94	6505.62	9434.74
A0A8I6AGS4	A0A8I6AGS4	A0A8I6AGS4_RAT	Abi3bp	ABI family member 3 binding protein	1	FTEAVVDAEPK	FTEAVVDAEPK	2	FTEAVVDAEPK2	6825.57	16977.5	19468.2
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	FTEDQSVCEK	FTEDQSVC(UniMod:4)EK	2	FTEDQSVC(UniMod:4)EK2	157689	148034	128563
F1MAR6	F1MAR6	F1MAR6_RAT	Prodh	Proline dehydrogenase	1	FTEEEEQQMK	FTEEEEQQMK	2	FTEEEEQQMK2	4778.11	1560.43	4834.57
P02767	P02767	TTHY_RAT	Ttr	Transthyretin	1	FTEGVYR	FTEGVYR	2	FTEGVYR2	1.68266e+06	1.41153e+06	1.82095e+06
P02767	P02767	TTHY_RAT	Ttr	Transthyretin	1	FTEGVYRVELDTK	FTEGVYRVELDTK	3	FTEGVYRVELDTK3	26710.3	52327.5	62209.6
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	FTELVCSLSDIYQMER	FTELVC(UniMod:4)SLSDIYQMER	3	FTELVC(UniMod:4)SLSDIYQMER3	2764.82	4347.02	4114.04
Q9WUD2	Q9WUD2	TRPV2_RAT	Trpv2	Transient receptor potential cation channel subfamily V member 2	1	FTEWCYGPVR	FTEWC(UniMod:4)YGPVR	2	FTEWC(UniMod:4)YGPVR2	19166.6	26868.1	24859
A0A8I6GLU8	A0A8I6GLU8	A0A8I6GLU8_RAT	Tardbp	TAR DNA-binding protein 43	1	FTEYETQVK	FTEYETQVK	2	FTEYETQVK2	32710.9	24750.6	34022.4
E9PSX8	E9PSX8	E9PSX8_RAT	Sipa1	Signal-induced proliferation-associated 1	1	FTFAETTGLRPGAR	FTFAETTGLRPGAR	3	FTFAETTGLRPGAR3	13242.5	10759	18261.9
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	FTFALGR	FTFALGR	2	FTFALGR2	608550	536241	549087
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	FTFEEAEAECANR	FTFEEAEAEC(UniMod:4)ANR	2	FTFEEAEAEC(UniMod:4)ANR2	13313.2	12516.7	12947.8
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	FTFGLDWVPK	FTFGLDWVPK	2	FTFGLDWVPK2	114145	113059	132201
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	FTFGLDWVPKK	FTFGLDWVPKK	3	FTFGLDWVPKK3	14915.9	19534.2	16899
P86182	P86182	CCD22_RAT	Ccdc22	Coiled-coil domain-containing protein 22	1	FTFHLEPQVQAAQVADIPAASQRPEQDTR	FTFHLEPQVQAAQVADIPAASQRPEQDTR	4	FTFHLEPQVQAAQVADIPAASQRPEQDTR4	12748.7	16784.9	11705
Q66HG5	Q66HG5	TM9S2_RAT	Tm9sf2	Transmembrane 9 superfamily member 2	1	FTFNKEETCK	FTFNKEETC(UniMod:4)K	2	FTFNKEETC(UniMod:4)K2	2406.91	3147.23	4044.89
Q66HG5	Q66HG5	TM9S2_RAT	Tm9sf2	Transmembrane 9 superfamily member 2	1	FTFNKEETCK	FTFNKEETC(UniMod:4)K	3	FTFNKEETC(UniMod:4)K3	78652.8	84322.2	72397
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	FTFQEAANECR	FTFQEAANEC(UniMod:4)R	2	FTFQEAANEC(UniMod:4)R2	6609.68	6244.26	5360.78
Q5BK49	Q5BK49	TACT_RAT	Cd96	T-cell surface protein tactile	1	FTFSWLVEK	FTFSWLVEK	2	FTFSWLVEK2	18040	12625	12146.7
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	FTFYDGPPFATGLPHYGHILAGTIK	FTFYDGPPFATGLPHYGHILAGTIK	3	FTFYDGPPFATGLPHYGHILAGTIK3	14433.1	14015.4	11298.4
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	FTFYDGPPFATGLPHYGHILAGTIK	FTFYDGPPFATGLPHYGHILAGTIK	4	FTFYDGPPFATGLPHYGHILAGTIK4	22939.9	28814.9	20585.3
F1LWX9	F1LWX9	F1LWX9_RAT	Tmem117	Transmembrane protein 117	1	FTGASLDVK	FTGASLDVK	2	FTGASLDVK2	7385.49	23980.1	32251.7
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	FTGFDAHYMAVDVDECK	FTGFDAHYMAVDVDEC(UniMod:4)K	3	FTGFDAHYMAVDVDEC(UniMod:4)K3	72860.7	104560	73476.4
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	FTGFDAHYMAVDVDECKER	FTGFDAHYMAVDVDEC(UniMod:4)KER	3	FTGFDAHYMAVDVDEC(UniMod:4)KER3	7063.77	10706.4	6427.62
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	FTGFDAHYMAVDVDECKER	FTGFDAHYMAVDVDEC(UniMod:4)KER	4	FTGFDAHYMAVDVDEC(UniMod:4)KER4	57234.4	62271.9	44913.2
P51886	P51886	LUM_RAT	Lum	Lumican	1	FTGLQYLR	FTGLQYLR	2	FTGLQYLR2	2.47525e+07	2.56025e+07	2.57512e+07
P06759	P06759	APOC3_RAT	Apoc3	Apolipoprotein C-III	1	FTGLWESGPEDQLTTPTLEP	FTGLWESGPEDQLTTPTLEP	3	FTGLWESGPEDQLTTPTLEP3	1.20301e+06	1.56728e+06	1.15555e+06
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	FTGQCHCAPGYIGDR	FTGQC(UniMod:4)HC(UniMod:4)APGYIGDR	2	FTGQC(UniMod:4)HC(UniMod:4)APGYIGDR2	11129.5	6672.8	7325.29
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	FTGQCHCAPGYIGDR	FTGQC(UniMod:4)HC(UniMod:4)APGYIGDR	3	FTGQC(UniMod:4)HC(UniMod:4)APGYIGDR3	41600.9	47592.3	55767.6
P27590	P27590	UROM_RAT	Umod	Uromodulin	1	FTGQGGVR	FTGQGGVR	2	FTGQGGVR2	34457.3	39298.2	39966.9
Q68FY0	Q68FY0;Q03346	QCR1_RAT	Uqcrc1	Cytochrome b-c1 complex subunit 1, mitochondrial	0	FTGSEIR	FTGSEIR	2	FTGSEIR2	596070	626120	643247
F1M3Y4	F1M3Y4	F1M3Y4_RAT	LOC100361052	Ig-like domain-containing protein	1	FTGSGFGR	FTGSGFGR	2	FTGSGFGR2	171678	151719	148716
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	FTGSIFIGR	FTGSIFIGR	2	FTGSIFIGR2	18690.3	16818.9	24626.1
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	FTGSQPFGR	FTGSQPFGR	2	FTGSQPFGR2	4.4553e+07	4.82746e+07	4.63217e+07
Q62918	Q62918	NELL2_RAT	Nell2	Protein kinase C-binding protein NELL2	1	FTGSSWIK	FTGSSWIK	2	FTGSSWIK2		8716.55	
Q5FVN0	Q5FVN0	MBOA5_RAT	Lpcat3	Lysophospholipid acyltransferase 5	1	FTGTIASFNINTNAWVAR	FTGTIASFNINTNAWVAR	3	FTGTIASFNINTNAWVAR3	2853.91		3230.42
A2RUV9	D4A536;A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	0	FTGVITQGR	FTGVITQGR	2	FTGVITQGR2	55463.6	50700.1	46496.8
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	FTHDDSFLVSLGGK	FTHDDSFLVSLGGK	3	FTHDDSFLVSLGGK3	15492.2	13904	10908
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	FTHGFQNIVDAYGIGTYR	FTHGFQNIVDAYGIGTYR	3	FTHGFQNIVDAYGIGTYR3	41321.6	29602.6	47001.2
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	FTHLFWLGDLNYR	FTHLFWLGDLNYR	3	FTHLFWLGDLNYR3	21584.1	47038.4	13042
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	FTIGDHSR	FTIGDHSR	2	FTIGDHSR2	216928	174625	169505
O70196	O70196	PPCE_RAT	Prep	Prolyl endopeptidase	1	FTIGHAWTTDYGCSDSK	FTIGHAWTTDYGC(UniMod:4)SDSK	3	FTIGHAWTTDYGC(UniMod:4)SDSK3	3139.83	1819.99	5571.12
A0A8I6AM66	A0A8I6AM66	A0A8I6AM66_RAT	Cdh15	Cadherin 15	1	FTILEGDPDGQFK	FTILEGDPDGQFK	2	FTILEGDPDGQFK2	12078.4	14287.5	4564.69
Q641Z2	Q641Z2	PTN9_RAT	Ptpn9	Tyrosine-protein phosphatase non-receptor type 9	1	FTILNVR	FTILNVR	2	FTILNVR2	8804.96	11905.4	9169.34
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	FTIQLQLSQK	FTIQLQLSQK	2	FTIQLQLSQK2	18367.4	13201.1	11606.3
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	FTISDHPQPIDPLLK	FTISDHPQPIDPLLK	2	FTISDHPQPIDPLLK2	71777	83809.9	89774.4
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	FTISDHPQPIDPLLK	FTISDHPQPIDPLLK	3	FTISDHPQPIDPLLK3	262233	338885	285710
F1M0U4	F1M0U4	F1M0U4_RAT	ENSRNOG00000066892	Ig-like domain-containing protein	1	FTISRDISQSILYLQMNTLK	FTISRDISQSILYLQMNTLK	3	FTISRDISQSILYLQMNTLK3	8871.77	8443.27	20050.4
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	FTITEAPIK	FTITEAPIK	2	FTITEAPIK2	1.08418e+06	564698	742693
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	FTITEAPIKK	FTITEAPIKK	2	FTITEAPIKK2	264576	167492	165840
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	FTITEAPIKK	FTITEAPIKK	3	FTITEAPIKK3	2.89447e+06	2.41218e+06	2.38825e+06
B2GUZ5	B2GUZ5	CAZA1_RAT	Capza1	F-actin-capping protein subunit alpha-1	1	FTITPPTAQVVGVLK	FTITPPTAQVVGVLK	2	FTITPPTAQVVGVLK2	270277	269586	293178
B2GUZ5	B2GUZ5	CAZA1_RAT	Capza1	F-actin-capping protein subunit alpha-1	1	FTITPPTAQVVGVLK	FTITPPTAQVVGVLK	3	FTITPPTAQVVGVLK3	14001.7	7598.28	14318.5
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	FTKANTFYRPGLPFFGQVLLVDEK	FTKANTFYRPGLPFFGQVLLVDEK	4	FTKANTFYRPGLPFFGQVLLVDEK4	50356	34254.3	50941.9
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	FTLEIWDK	FTLEIWDK	2	FTLEIWDK2	15049	14635.2	16397.9
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	FTLFGVANK	FTLFGVANK	2	FTLFGVANK2	12460.4	9146.64	9617.1
Q6AYB2	Q6AYB2	Q6AYB2_RAT	Sphk2	Sphingosine kinase 2	1	FTLGAVLGLATLHTYR	FTLGAVLGLATLHTYR	3	FTLGAVLGLATLHTYR3	3710.67	5001.32	2624.9
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	FTLGSVAGAVGATAVYPIDLVK	FTLGSVAGAVGATAVYPIDLVK	3	FTLGSVAGAVGATAVYPIDLVK3	20991.4	15804.4	17716.4
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	FTLLTVSSGITEMK	FTLLTVSSGITEMK	2	FTLLTVSSGITEMK2	12299.3	11986.2	17479.7
Q4KSH6	Q4KSH6	Q4KSH6_RAT	Map2k4	Dual specificity mitogen-activated protein kinase kinase 4	1	FTLNPNTTGVQNPHIER	FTLNPNTTGVQNPHIER	3	FTLNPNTTGVQNPHIER3	11424.1	10990.8	13947.1
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	FTLPPLVFAAYQLAFR	FTLPPLVFAAYQLAFR	2	FTLPPLVFAAYQLAFR2		3904.87	2631.38
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	FTLQPSGELLVK	FTLQPSGELLVK	2	FTLQPSGELLVK2	6897.21		
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	FTLRDEGK	FTLRDEGK	2	FTLRDEGK2	29636.1	34883.3	30469.2
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	FTLSANVGDLK	FTLSANVGDLK	2	FTLSANVGDLK2	13647.3	10943.5	12789.8
Q5FVL2	Q5FVL2	EMC8_RAT	Emc8	ER membrane protein complex subunit 8	1	FTMDCAAPTIHVYEQHENR	FTMDC(UniMod:4)AAPTIHVYEQHENR	3	FTMDC(UniMod:4)AAPTIHVYEQHENR3	14723.1	12286	12089.1
Q5FVL2	Q5FVL2	EMC8_RAT	Emc8	ER membrane protein complex subunit 8	1	FTMDCAAPTIHVYEQHENR	FTMDC(UniMod:4)AAPTIHVYEQHENR	4	FTMDC(UniMod:4)AAPTIHVYEQHENR4	31076.5	21914.6	28507.8
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	FTMELAK	FTMELAK	1	FTMELAK1	1939.21		
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	FTMELAK	FTMELAK	2	FTMELAK2	285855	247277	280007
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	FTNDVMDAGYPK	FTNDVMDAGYPK	2	FTNDVMDAGYPK2	775958	750553	730479
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	FTNDVMDAGYPK	FTNDVMDAGYPK	3	FTNDVMDAGYPK3	8227.82	6853.45	14545
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	FTNGLGTCGLLTALK	FTNGLGTC(UniMod:4)GLLTALK	2	FTNGLGTC(UniMod:4)GLLTALK2	4201.74		4344.39
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	FTNIGPDTMR	FTNIGPDTMR	2	FTNIGPDTMR2	59837.5	75425.7	4.7551e+07
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	FTNIGPDTMR	FTNIGPDTMR	3	FTNIGPDTMR3	9530.69	6829.87	7377.05
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	FTNIGPDTMRVTWAPPPSIELTNLLVR	FTNIGPDTMRVTWAPPPSIELTNLLVR	4	FTNIGPDTMRVTWAPPPSIELTNLLVR4	751509	781442	899552
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	FTNSETAEHIAQGLR	FTNSETAEHIAQGLR	2	FTNSETAEHIAQGLR2	6291.49	3289.22	6550.13
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	FTNSETAEHIAQGLR	FTNSETAEHIAQGLR	3	FTNSETAEHIAQGLR3	147371	143940	139174
A0A8I5ZXD6	D4A5F0;A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	0	FTNVLTTVGSNK	FTNVLTTVGSNK	2	FTNVLTTVGSNK2	47980.4	47232.9	28772.6
P38983	P38983	RSSA_RAT	Rpsa	Small ribosomal subunit protein uS2	1	FTPGTFTNQIQAAFR	FTPGTFTNQIQAAFR	2	FTPGTFTNQIQAAFR2	23169.4	15590	15092.6
P38983	P38983	RSSA_RAT	Rpsa	Small ribosomal subunit protein uS2	1	FTPGTFTNQIQAAFR	FTPGTFTNQIQAAFR	3	FTPGTFTNQIQAAFR3	41623.4	31498.6	31153.7
Q5RJS3	Q5RJS3	Q5RJS3_RAT	Ciao2a	Cytosolic iron-sulfur assembly component 2A	1	FTPTVPHCSLATLIGLCLR	FTPTVPHC(UniMod:4)SLATLIGLC(UniMod:4)LR	3	FTPTVPHC(UniMod:4)SLATLIGLC(UniMod:4)LR3	27792.3	20074.6	13672.7
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	FTPVASK	FTPVASK	1	FTPVASK1	34826.4	28351.2	31880.4
P48548	P48548	KCNJ5_RAT	Kcnj5	G protein-activated inward rectifier potassium channel 4	1	FTPVLTLEK	FTPVLTLEK	2	FTPVLTLEK2	272765	249927	299137
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	FTQAGSEVSALLGR	FTQAGSEVSALLGR	2	FTQAGSEVSALLGR2	759031	710733	705059
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	FTQAGSEVSALLGR	FTQAGSEVSALLGR	3	FTQAGSEVSALLGR3	150555	128097	135674
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	FTQAQLDSGLVLFSHR	FTQAQLDSGLVLFSHR	2	FTQAQLDSGLVLFSHR2	2489.39	3143.79	1027.27
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	FTQAQLDSGLVLFSHR	FTQAQLDSGLVLFSHR	3	FTQAQLDSGLVLFSHR3	60350.9	77454.1	74590.5
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	FTQDAYSAVVK	FTQDAYSAVVK	2	FTQDAYSAVVK2	57680.3	46550.9	48432.8
F1LMI3	F1LMI3	F1LMI3_RAT	Cdh3	Cadherin 3	1	FTQDTFR	FTQDTFR	2	FTQDTFR2	29682	29120.5	25580.3
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	FTQDTQPHYIYSPR	FTQDTQPHYIYSPR	2	FTQDTQPHYIYSPR2	12210.7	20180.1	20881.4
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	FTQDTQPHYIYSPR	FTQDTQPHYIYSPR	3	FTQDTQPHYIYSPR3	234736	297206	277267
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	FTQEDLR	FTQEDLR	2	FTQEDLR2	81443.8	83044	72152.6
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	FTQEDLRK	FTQEDLRK	2	FTQEDLRK2	25513.7	18979	7085.81
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	FTQQDIDEAK	FTQQDIDEAK	2	FTQQDIDEAK2	17285.2	18506.6	22078.3
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	FTQSALDCMSVEVGR	FTQSALDC(UniMod:4)MSVEVGR	2	FTQSALDC(UniMod:4)MSVEVGR2	22671.7	27855.2	15315
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	FTQSALDCMSVEVGR	FTQSALDC(UniMod:4)MSVEVGR	3	FTQSALDC(UniMod:4)MSVEVGR3	4500.68	6257.08	
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	FTQVSPTTLTAQWTAPSVK	FTQVSPTTLTAQWTAPSVK	3	FTQVSPTTLTAQWTAPSVK3	12910.8	14784.8	15041
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	FTQVSPTTLTAQWTAPSVK	FTQVSPTTLTAQWTAPSVK	4	FTQVSPTTLTAQWTAPSVK4	17693.9	20019.4	21374.5
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	FTQVSPTTLTAQWTAPSVKLTGYR	FTQVSPTTLTAQWTAPSVKLTGYR	3	FTQVSPTTLTAQWTAPSVKLTGYR3	26175.6	17539.9	26028.1
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	FTQVSPTTLTAQWTAPSVKLTGYRVR	FTQVSPTTLTAQWTAPSVKLTGYRVR	4	FTQVSPTTLTAQWTAPSVKLTGYRVR4	21433.3	19835.4	18455.5
Q5I0L7	Q5I0L7	KTI12_RAT	Kti12	Protein KTI12 homolog	1	FTRPLTLAELSR	FTRPLTLAELSR	3	FTRPLTLAELSR3	4631.29	5070.09	6568.89
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	FTSDMSNTEWGYR	FTSDMSNTEWGYR	2	FTSDMSNTEWGYR2	12710.9	15236.8	14298.6
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	FTSDSPVVAR	FTSDSPVVAR	2	FTSDSPVVAR2	121475	106096	115831
Q66HC5	Q66HC5	NUP93_RAT	Nup93	Nuclear pore complex protein Nup93	1	FTSDTKPIINK	FTSDTKPIINK	3	FTSDTKPIINK3	35288.3	18926.6	23314.8
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	FTSDYAR	FTSDYAR	2	FTSDYAR2	108085	151067	151171
D3ZT64	D3ZT64	D3ZT64_RAT	Atg2a	Autophagy related 2A	1	FTSEVPICLDYHGK	FTSEVPIC(UniMod:4)LDYHGK	3	FTSEVPIC(UniMod:4)LDYHGK3	5076.5	6759.32	9506.7
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	FTSIVVANGK	FTSIVVANGK	2	FTSIVVANGK2	53857.6	67914	58840.5
Q32KJ6	Q32KJ6	GALNS_RAT	Galns	N-acetylgalactosamine-6-sulfatase	1	FTSNEYQDALSR	FTSNEYQDALSR	2	FTSNEYQDALSR2	38471.7	34288.1	32670.5
D3ZWW0	D3ZWW0	D3ZWW0_RAT	Slc35c1	Solute carrier family 35 member C1	1	FTSPLTHNVSGTAK	FTSPLTHNVSGTAK	3	FTSPLTHNVSGTAK3	39707.4	47089.2	48191.1
Q5PQX1	Q5PQX1	TOIP1_RAT	Tor1aip1	Torsin-1A-interacting protein 1	1	FTSSDTANSYNHMDPDK	FTSSDTANSYNHMDPDK	3	FTSSDTANSYNHMDPDK3		3913.73	
D4ACA1	D4ACA1	D4ACA1_RAT	Nxpe3	Neurexophilin and PC-esterase domain family, member 3	1	FTSVFSNDLHYVANELNR	FTSVFSNDLHYVANELNR	3	FTSVFSNDLHYVANELNR3	12889	18895.3	4473.57
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	FTSYVQEK	FTSYVQEK	2	FTSYVQEK2	42359.8	36979.1	29753.4
A0A0G2K2M3	A0A0G2K2M3	A0A0G2K2M3_RAT	Stat6	Signal transducer and activator of transcription	1	FTTALGR	FTTALGR	2	FTTALGR2	12497	16438.5	14888.4
D3ZCD0	D3ZCD0	D3ZCD0_RAT	Tek	receptor protein-tyrosine kinase	1	FTTASIGLPPPR	FTTASIGLPPPR	2	FTTASIGLPPPR2	11117.3	8108.03	8679.82
P28077	P28077	PSB9_RAT	Psmb9	Proteasome subunit beta type-9	1	FTTDAITLAMNR	FTTDAITLAMNR	2	FTTDAITLAMNR2	1.38414e+06	1.29007e+06	1.30913e+06
P28077	P28077	PSB9_RAT	Psmb9	Proteasome subunit beta type-9	1	FTTDAITLAMNR	FTTDAITLAMNR	3	FTTDAITLAMNR3	153134	140812	162598
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	FTTDLDSPR	FTTDLDSPR	2	FTTDLDSPR2	585707	784367	701836
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	FTTEWDNLAR	FTTEWDNLAR	2	FTTEWDNLAR2	803.575	4250.98	1775.24
B0BNA5	B0BNA5	COTL1_RAT	Cotl1	Coactosin-like protein	1	FTTGDAMSK	FTTGDAMSK	1	FTTGDAMSK1	2825.46	3298.12	1654.97
B0BNA5	B0BNA5	COTL1_RAT	Cotl1	Coactosin-like protein	1	FTTGDAMSK	FTTGDAMSK	2	FTTGDAMSK2	124627	107077	136375
Q99P99	Q99P99	HDAC4_RAT	Hdac4	Histone deacetylase 4	1	FTTGLVYDTLMLK	FTTGLVYDTLMLK	2	FTTGLVYDTLMLK2	6093.59	8662.38	2190.74
A0A8I6AUQ7	A0A8I6AUQ7	A0A8I6AUQ7_RAT	Zpr1	ZPR1 zinc finger	1	FTTLEGLLK	FTTLEGLLK	2	FTTLEGLLK2	10776.9	7978.13	13684.2
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	FTTPLLK	FTTPLLK	1	FTTPLLK1	17666.9	23833.6	13692
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	FTTPLLK	FTTPLLK	2	FTTPLLK2	1.36232e+06	1.78618e+06	1.53411e+06
A0A8I5YC01	A0A8I5YC01	A0A8I5YC01_RAT	Gimap1	GTPase, IMAP family member 1	1	FTTQDSQALAAVK	FTTQDSQALAAVK	2	FTTQDSQALAAVK2	6303.13	6388.36	8488.38
Q5U211	Q5U211	SNX3_RAT	Snx3	Sorting nexin-3	1	FTTYEIR	FTTYEIR	2	FTTYEIR2	26155	11774.6	15737.8
A0A8I6A8Y6	A0A8I6A8Y6	A0A8I6A8Y6_RAT	Sf3b2	Splicing factor 3b, subunit 2	1	FTVAELK	FTVAELK	1	FTVAELK1	2831.6	4144.21	3340.89
A0A8I6A8Y6	A0A8I6A8Y6	A0A8I6A8Y6_RAT	Sf3b2	Splicing factor 3b, subunit 2	1	FTVAELK	FTVAELK	2	FTVAELK2	4579.97		
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	FTVDGIPYFVDHNR	FTVDGIPYFVDHNR	3	FTVDGIPYFVDHNR3	28206.5	20403	31069
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	FTVDGIPYFVDHNRR	FTVDGIPYFVDHNRR	3	FTVDGIPYFVDHNRR3	16053.1	18181.9	11440.5
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	FTVDGIPYFVDHNRR	FTVDGIPYFVDHNRR	4	FTVDGIPYFVDHNRR4	41551.5	47518.3	65727.4
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	FTVDLPK	FTVDLPK	2	FTVDLPK2	231104	205031	209435
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	FTVDQTQTPSLK	FTVDQTQTPSLK	2	FTVDQTQTPSLK2	30040	33967.1	16280.3
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	FTVDRPFLFLVYEHR	FTVDRPFLFLVYEHR	2	FTVDRPFLFLVYEHR2	39842.7	37176.1	33753.8
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	FTVDRPFLFLVYEHR	FTVDRPFLFLVYEHR	3	FTVDRPFLFLVYEHR3	5.24484e+06	4.95524e+06	3.79419e+06
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	FTVDRPFLFLVYEHR	FTVDRPFLFLVYEHR	4	FTVDRPFLFLVYEHR4	4.2622e+06	4.5293e+06	3.63182e+06
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	FTVDRPFLFLVYEHRTSCLLFMGR	FTVDRPFLFLVYEHRTSC(UniMod:4)LLFMGR	4	FTVDRPFLFLVYEHRTSC(UniMod:4)LLFMGR4	175837	91009.6	62778.8
O88775	O88775	EMB_RAT	Emb	Embigin	1	FTVFNSK	FTVFNSK	2	FTVFNSK2	42091.8	28783.4	49291.2
D4A3X7	D4A3X7	D4A3X7_RAT	Snx33	Sorting nexin	1	FTVISVPHLPEK	FTVISVPHLPEK	3	FTVISVPHLPEK3	11823	12312.5	8165.01
Q6AYB4	Q6AYB4	HSP7E_RAT	Hspa14	Heat shock 70 kDa protein 14	1	FTVLFPSGTPLPAR	FTVLFPSGTPLPAR	2	FTVLFPSGTPLPAR2	40686.6	42753.5	27697.6
Q3KRE2	Q3KRE2	Q3KRE2_RAT	Mettl7a	Methyltransferase like 7A	1	FTVMYNEQMATR	FTVMYNEQMATR	2	FTVMYNEQMATR2	2904.21	9902.25	6074.9
A0A8I5YCC9	A0A8I5YCC9	A0A8I5YCC9_RAT	Itga5	Integrin subunit alpha 5	1	FTVPHLQDTK	FTVPHLQDTK	3	FTVPHLQDTK3	7583.59	14745	13099.3
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	FTVQASEGVPMR	FTVQASEGVPMR	2	FTVQASEGVPMR2	8162.96	11871.7	5521.47
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	FTVSVNVAAGSK	FTVSVNVAAGSK	2	FTVSVNVAAGSK2	128860	150465	133207
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	FTVSVNVAAGSK	FTVSVNVAAGSK	3	FTVSVNVAAGSK3	51777.1	37019.4	19055.8
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	FTVSVNVAAGSKVIFELTYEELLKR	FTVSVNVAAGSKVIFELTYEELLKR	4	FTVSVNVAAGSKVIFELTYEELLKR4	54291.6	37122	40218.1
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	FTVTAGHLGR	FTVTAGHLGR	2	FTVTAGHLGR2	7318.76	4060.98	2716.07
Q8R553	Q8R553	CSTN3_RAT	Clstn3	Calsyntenin-3	1	FTVTAYDCGK	FTVTAYDC(UniMod:4)GK	2	FTVTAYDC(UniMod:4)GK2	11409.9	9006.18	6666.56
Q3T1K5	Q3T1K5	CAZA2_RAT	Capza2	F-actin-capping protein subunit alpha-2	1	FTVTPSTTQVVGILK	FTVTPSTTQVVGILK	2	FTVTPSTTQVVGILK2	248319	227501	238577
Q3T1K5	Q3T1K5	CAZA2_RAT	Capza2	F-actin-capping protein subunit alpha-2	1	FTVTPSTTQVVGILK	FTVTPSTTQVVGILK	3	FTVTPSTTQVVGILK3	5240.5	1239.67	3077.19
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	FTVTQRPRPGSAPLHR	FTVTQRPRPGSAPLHR	4	FTVTQRPRPGSAPLHR4	2865.05	9901.17	8088.96
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	FTVTTGHYTVK	FTVTTGHYTVK	3	FTVTTGHYTVK3	4038.37	6210.2	
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	FTVVVLR	FTVVVLR	2	FTVVVLR2	184226	164029	172822
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	FTYAGCSSVK	FTYAGC(UniMod:4)SSVK	2	FTYAGC(UniMod:4)SSVK2	70993.8	64663.2	65566.3
D4A9N5	D4A9N5	D4A9N5_RAT	Trim25	Tripartite motif-containing 25	1	FTYCSQVLGLHCYK	FTYC(UniMod:4)SQVLGLHC(UniMod:4)YK	3	FTYC(UniMod:4)SQVLGLHC(UniMod:4)YK3		3621.79	1512.41
F1M9D6	F1M9D6	F1M9D6_RAT	Stat1	Signal transducer and activator of transcription	1	FTYEQDPITK	FTYEQDPITK	2	FTYEQDPITK2	24163.8	13795	13854
D3ZY47	D3ZY47	D3ZY47_RAT	C19h1orf198	Similar to RIKEN cDNA 2310022B05	1	FTYFSSLSPMAR	FTYFSSLSPMAR	2	FTYFSSLSPMAR2	8591.99	5310.3	7444.59
Q5FVF4	Q5FVF4	TM7S3_RAT	Tm7sf3	Transmembrane 7 superfamily member 3	1	FTYFVLSR	FTYFVLSR	2	FTYFVLSR2	41294.3	40884.5	37107
P02454	P02454	CO1A1_RAT	Col1a1	Collagen alpha-1(I) chain	1	FTYSTLVDGCTSHTGTWGK	FTYSTLVDGC(UniMod:4)TSHTGTWGK	3	FTYSTLVDGC(UniMod:4)TSHTGTWGK3	4970.56	9000.09	10505.1
P13941	P13941	CO3A1_RAT	Col3a1	Collagen alpha-1(III) chain	1	FTYTVLEDGCTK	FTYTVLEDGC(UniMod:4)TK	2	FTYTVLEDGC(UniMod:4)TK2	11389.9	18941.4	19488.9
P02466	P02466	CO1A2_RAT	Col1a2	Collagen alpha-2(I) chain	1	FTYTVLVDGCSK	FTYTVLVDGC(UniMod:4)SK	2	FTYTVLVDGC(UniMod:4)SK2	11168.7	7713.5	12139.3
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	FVAAQAAVAPAEELAFTDSLITR	FVAAQAAVAPAEELAFTDSLITR	3	FVAAQAAVAPAEELAFTDSLITR3	3735.95		4739.39
P62909	D3ZVH2;P62909;A0A8I6ASH0;A0A8I6GGS4	RS3_RAT	Rps3	Small ribosomal subunit protein uS3	0	FVADGIFK	FVADGIFK	2	FVADGIFK2	57551.6	40007.7	56126.7
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	FVAEDLSQDCFWTK	FVAEDLSQDC(UniMod:4)FWTK	2	FVAEDLSQDC(UniMod:4)FWTK2	111103	128663	114131
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	FVAEDLSQDCFWTK	FVAEDLSQDC(UniMod:4)FWTK	3	FVAEDLSQDC(UniMod:4)FWTK3		3446.14	7276.92
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	FVAEQVSHHPPVSGFYAECAER	FVAEQVSHHPPVSGFYAEC(UniMod:4)AER	4	FVAEQVSHHPPVSGFYAEC(UniMod:4)AER4	8985.01	8512.27	13064.4
Q9ES53	Q9ES53	UFD1_RAT	Ufd1	Ubiquitin recognition factor in ER-associated degradation protein 1	1	FVAFSGEGQSLR	FVAFSGEGQSLR	2	FVAFSGEGQSLR2	31133.3	23973.2	26736.8
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	FVAIIIEASGGGAFLVLPLHK	FVAIIIEASGGGAFLVLPLHK	3	FVAIIIEASGGGAFLVLPLHK3	15259.6	18105.5	10183
A0A8I6ANF5	A0A8I6ANF5	A0A8I6ANF5_RAT	Dffa	DNA fragmentation factor subunit alpha	1	FVALACNEK	FVALAC(UniMod:4)NEK	2	FVALAC(UniMod:4)NEK2	47427.6	33742.9	30219.1
Q9ES54	Q9ES54	NPL4_RAT	Nploc4	Nuclear protein localization protein 4 homolog	1	FVALENISCK	FVALENISC(UniMod:4)K	2	FVALENISC(UniMod:4)K2	22636.2	19228.9	29068.1
A0A8I5Y120	A0A8I5Y120	A0A8I5Y120_RAT	Brap	BRCA1 associated protein	1	FVAPFNDVIEQMK	FVAPFNDVIEQMK	2	FVAPFNDVIEQMK2	9268.05	5554.24	9857.7
M0R4M1	M0R4M1	M0R4M1_RAT	Nlrc5	NLR family, CARD domain containing 5	1	FVAQSLPFDLSFHNFPLTR	FVAQSLPFDLSFHNFPLTR	3	FVAQSLPFDLSFHNFPLTR3	3993.94		5107.23
P97829	P97829	CD47_RAT	Cd47	Leukocyte surface antigen CD47	1	FVASNQR	FVASNQR	2	FVASNQR2	409034	534834	445070
A0A8I5ZYW3	A0A8I5ZYW3	A0A8I5ZYW3_RAT	Lsp1	Lymphocyte-specific protein 1	1	FVATGHGK	FVATGHGK	2	FVATGHGK2			21614.6
P29288	P29288	PPA5_RAT	Acp5	Tartrate-resistant acid phosphatase type 5	1	FVAVGDWGGVPNAPFHTAR	FVAVGDWGGVPNAPFHTAR	3	FVAVGDWGGVPNAPFHTAR3	12660.8	6396.56	8600.7
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	FVAWMNGLSVYQIK	FVAWMNGLSVYQIK	2	FVAWMNGLSVYQIK2	17301.8	18545.5	15155.2
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	FVAWMNGLSVYQIK	FVAWMNGLSVYQIK	3	FVAWMNGLSVYQIK3	2490.19	6990.89	14994.4
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	FVAYTDGTFHTR	FVAYTDGTFHTR	2	FVAYTDGTFHTR2	25312	22278.6	20688.6
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	FVAYTDGTFHTR	FVAYTDGTFHTR	3	FVAYTDGTFHTR3	104250	84689.6	108343
D3ZP12	D3ZP12	D3ZP12_RAT	Zc3h7a	Zinc finger CCCH type containing 7 A	1	FVCAQCLR	FVC(UniMod:4)AQC(UniMod:4)LR	2	FVC(UniMod:4)AQC(UniMod:4)LR2	10587.7		
Q8R491	Q8R491	EHD3_RAT	Ehd3	EH domain-containing protein 3	1	FVCAQLPNAVLESISVIDTPGILSGEK	FVC(UniMod:4)AQLPNAVLESISVIDTPGILSGEK	3	FVC(UniMod:4)AQLPNAVLESISVIDTPGILSGEK3		15069.7	33082.7
A0A8I5ZUE7	A0A8I5ZUE7	A0A8I5ZUE7_RAT	Zc3h7b	Zinc finger CCCH-type containing 7B	1	FVCGQCWR	FVC(UniMod:4)GQC(UniMod:4)WR	2	FVC(UniMod:4)GQC(UniMod:4)WR2	12149.4	12825.1	11017.6
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	FVCKPGAR	FVC(UniMod:4)KPGAR	2	FVC(UniMod:4)KPGAR2	12445.4	8585.15	11748.6
D3ZMA2	D3ZMA2	D3ZMA2_RAT	Mtmr14	Myotubularin related protein 14	1	FVCPVILFK	FVC(UniMod:4)PVILFK	2	FVC(UniMod:4)PVILFK2	48564	50023.2	50632.4
Q924C3	Q924C3	ENPP1_RAT	Enpp1	Ectonucleotide pyrophosphatase/phosphodiesterase family member 1	1	FVCSCADDCK	FVC(UniMod:4)SC(UniMod:4)ADDC(UniMod:4)K	2	FVC(UniMod:4)SC(UniMod:4)ADDC(UniMod:4)K2	5553.6	7652.37	8631.45
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	FVCSPDEVMDTIDEGK	FVC(UniMod:4)SPDEVMDTIDEGK	2	FVC(UniMod:4)SPDEVMDTIDEGK2	149858	140444	166300
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	FVCSPDEVMDTIDEGK	FVC(UniMod:4)SPDEVMDTIDEGK	3	FVC(UniMod:4)SPDEVMDTIDEGK3	6944.39	12779.6	23054.8
D3ZES7	A0A8I6AGW9;D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	0	FVDDLFETIFSTAHR	FVDDLFETIFSTAHR	3	FVDDLFETIFSTAHR3	28197.5	17039.4	27724.6
Q4KLF8	Q4KLF8;A0A8I6G2W5	ARPC5_RAT	Arpc5	Actin-related protein 2/3 complex subunit 5	0	FVDEEDGGDGQAGPDEGEVDSCLR	FVDEEDGGDGQAGPDEGEVDSC(UniMod:4)LR	3	FVDEEDGGDGQAGPDEGEVDSC(UniMod:4)LR3	117096	106274	107332
A1L108	A1L108	ARP5L_RAT	Arpc5l	Actin-related protein 2/3 complex subunit 5-like protein	1	FVDEHEEAAAASGEPGPDPCEVDGLLR	FVDEHEEAAAASGEPGPDPC(UniMod:4)EVDGLLR	3	FVDEHEEAAAASGEPGPDPC(UniMod:4)EVDGLLR3	25956.7	22534.1	35024.3
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	FVDGALR	FVDGALR	2	FVDGALR2	161178	191879	159103
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	FVDGEWYR	FVDGEWYR	2	FVDGEWYR2	226124	170685	191248
P62909	D3ZVH2;P62909	RS3_RAT	Rps3	Small ribosomal subunit protein uS3	0	FVDGLMIHSGDPVNYYVDTAVR	FVDGLMIHSGDPVNYYVDTAVR	3	FVDGLMIHSGDPVNYYVDTAVR3	16428.7	12524.5	13574.1
D4A5Q2	D4A5Q2	D4A5Q2_RAT	Smc2	Structural maintenance of chromosomes protein	1	FVDGVSTVAR	FVDGVSTVAR	2	FVDGVSTVAR2	11899.9		7214.66
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	FVDHVFDEQVIDSLTVK	FVDHVFDEQVIDSLTVK	3	FVDHVFDEQVIDSLTVK3	195686	172342	192830
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	FVDILTNWYVR	FVDILTNWYVR	2	FVDILTNWYVR2	16322.2	20030.5	14785
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	FVDIQYFHAPNK	FVDIQYFHAPNK	2	FVDIQYFHAPNK2	4010.03	4322.26	2441.33
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	FVDIQYFHAPNK	FVDIQYFHAPNK	3	FVDIQYFHAPNK3	63181.6	63788.7	53497.3
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	FVDLYGAQK	FVDLYGAQK	2	FVDLYGAQK2	270640	285701	315313
D4A3E8	D4A3E8	D4A3E8_RAT	Mrps27	Mitochondrial ribosomal protein S27	1	FVDNISSR	FVDNISSR	2	FVDNISSR2	13580.1	14779	7796.18
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	FVDPIQDHVLSK	FVDPIQDHVLSK	3	FVDPIQDHVLSK3	19409.4	19209.3	22420.7
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	FVDQEQLDDPVCYLK	FVDQEQLDDPVC(UniMod:4)YLK	2	FVDQEQLDDPVC(UniMod:4)YLK2	47712.8	41559.2	38634.2
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	FVDQEQLDDPVCYLK	FVDQEQLDDPVC(UniMod:4)YLK	3	FVDQEQLDDPVC(UniMod:4)YLK3	7708.81	12096.1	9975.57
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	FVDQEQLDDPVCYLKK	FVDQEQLDDPVC(UniMod:4)YLKK	3	FVDQEQLDDPVC(UniMod:4)YLKK3	7727.34	20695.2	16000.9
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	FVDYCLHK	FVDYC(UniMod:4)LHK	2	FVDYC(UniMod:4)LHK2	6698.73	9497.7	4110.1
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	FVEDTCR	FVEDTC(UniMod:4)R	2	FVEDTC(UniMod:4)R2	155341	139656	126646
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	FVEEQHTK	FVEEQHTK	2	FVEEQHTK2			26412.7
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	FVEEYIPTQEIQVTSIHWNYK	FVEEYIPTQEIQVTSIHWNYK	3	FVEEYIPTQEIQVTSIHWNYK3	24748.8	35537	24624.1
A0A0G2KAE1	A0A0G2KAE1	A0A0G2KAE1_RAT	Lims2	LIM and senescent cell antigen-like-containing domain protein	1	FVEFDMKPVCK	FVEFDMKPVC(UniMod:4)K	2	FVEFDMKPVC(UniMod:4)K2	57246.4	50809	50536.3
A0A0G2KAE1	A0A0G2KAE1	A0A0G2KAE1_RAT	Lims2	LIM and senescent cell antigen-like-containing domain protein	1	FVEFDMKPVCK	FVEFDMKPVC(UniMod:4)K	3	FVEFDMKPVC(UniMod:4)K3	1.45424e+06	1.35571e+06	1.42925e+06
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	FVEFFGPGVAQLSIADR	FVEFFGPGVAQLSIADR	2	FVEFFGPGVAQLSIADR2	7469.47	14796.2	11929.5
O88989	O88989	MDHC_RAT	Mdh1	Malate dehydrogenase, cytoplasmic	1	FVEGLPINDFSR	FVEGLPINDFSR	2	FVEGLPINDFSR2	177829	143456	166819
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	FVEGVCPFCGYEEAR	FVEGVC(UniMod:4)PFC(UniMod:4)GYEEAR	2	FVEGVC(UniMod:4)PFC(UniMod:4)GYEEAR2	12639.8	9513.68	12473.5
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	FVEGVCPFCGYEEARGDQCDK	FVEGVC(UniMod:4)PFC(UniMod:4)GYEEARGDQC(UniMod:4)DK	3	FVEGVC(UniMod:4)PFC(UniMod:4)GYEEARGDQC(UniMod:4)DK3	7948.88	13341.5	15793.1
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	FVEIHFNEK	FVEIHFNEK	2	FVEIHFNEK2	6198.67	3726.93	
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	FVEIHFNEK	FVEIHFNEK	3	FVEIHFNEK3	16385.3	11480.5	20881.1
D4A746	D4A746	D4A746_RAT	Gmppb	GDP-mannose pyrophosphorylase B	1	FVEKPQVFVSNK	FVEKPQVFVSNK	3	FVEKPQVFVSNK3	14614.2	12126.2	12172.1
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	FVELPGAEMGK	FVELPGAEMGK	2	FVELPGAEMGK2	147870	146819	119597
A0A8I5ZXC8	A0A8I5ZXC8	A0A8I5ZXC8_RAT	Mrps16	Mitochondrial ribosomal protein S16	1	FVEQLGSYDPLPNSHGEK	FVEQLGSYDPLPNSHGEK	3	FVEQLGSYDPLPNSHGEK3	6196.44	10676.6	9110.37
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	FVESILSNNTTDDHCQEFVNQK	FVESILSNNTTDDHC(UniMod:4)QEFVNQK	3	FVESILSNNTTDDHC(UniMod:4)QEFVNQK3	15619.4	27885.7	17712.9
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	FVETNLFLEEIQIK	FVETNLFLEEIQIK	2	FVETNLFLEEIQIK2	2385.71	3538.29	
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	FVETNLFLEEIQIKEPAEK	FVETNLFLEEIQIKEPAEK	3	FVETNLFLEEIQIKEPAEK3	14765.6	16238.7	9894.22
A0A0G2JVT8	A0A8I6ARY9;A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	0	FVEVLLLNNTQSNR	FVEVLLLNNTQSNR	2	FVEVLLLNNTQSNR2	4024.03		3679.76
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	FVEYYLTSFHEGR	FVEYYLTSFHEGR	3	FVEYYLTSFHEGR3	5822.2	9911.38	5143.87
P82471	Q9JID2;P82471;A0A8J8XRQ3	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	0	FVFAAVK	FVFAAVK	2	FVFAAVK2	283927	253297	294928
P82471	Q9JID2;P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	0	FVFAAVKDTILQLNLK	FVFAAVKDTILQLNLK	3	FVFAAVKDTILQLNLK3	10538.2		5305.69
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	FVFCPETTDDEK	FVFC(UniMod:4)PETTDDEK	2	FVFC(UniMod:4)PETTDDEK2	18696.7	20984.6	26040.7
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	FVFCPETTDDEKK	FVFC(UniMod:4)PETTDDEKK	3	FVFC(UniMod:4)PETTDDEKK3	29709.1	37476.5	40963.1
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	FVFDRPLPVSR	FVFDRPLPVSR	2	FVFDRPLPVSR2	96511.2	111181	90274.6
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	FVFDRPLPVSR	FVFDRPLPVSR	3	FVFDRPLPVSR3	1.01506e+07	1.08961e+07	1.20681e+07
B5DEH4	B5DEH4	B5DEH4_RAT	Uap1l1	UDP-N-acetylglucosamine pyrophosphorylase 1 like 1	1	FVFDVLPFAK	FVFDVLPFAK	2	FVFDVLPFAK2	4719.29		8093.94
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	FVFEAPYTLSGK	FVFEAPYTLSGK	2	FVFEAPYTLSGK2	20412.9	24912.9	19211.7
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	FVFEVIPASSDQNR	FVFEVIPASSDQNR	2	FVFEVIPASSDQNR2	67777.5	54155.4	66651.6
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	FVFEVIPASSDQNR	FVFEVIPASSDQNR	3	FVFEVIPASSDQNR3	5723.85	2205.9	7323.96
A0A8I5ZVI9	A0A8I5ZVI9	A0A8I5ZVI9_RAT	Ranbp3	RAN binding protein 3	1	FVFGQNMSER	FVFGQNMSER	2	FVFGQNMSER2	42012	47191.6	43706.3
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	FVFGTTPEDILR	FVFGTTPEDILR	2	FVFGTTPEDILR2	1.7122e+07	1.7981e+07	1.7323e+07
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	FVFGTTPEDILR	FVFGTTPEDILR	3	FVFGTTPEDILR3	53708	47793	51848.6
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	FVFHNEQVYCPDCAK	FVFHNEQVYC(UniMod:4)PDC(UniMod:4)AK	2	FVFHNEQVYC(UniMod:4)PDC(UniMod:4)AK2	15028.7	6201.37	7233.03
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	FVFHNEQVYCPDCAK	FVFHNEQVYC(UniMod:4)PDC(UniMod:4)AK	3	FVFHNEQVYC(UniMod:4)PDC(UniMod:4)AK3	470817	428184	498899
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	FVFKVPEEER	FVFKVPEEER	3	FVFKVPEEER3	13762.2	28614.2	36387.9
A0A8I6G1P7	A0A8I6G1P7	A0A8I6G1P7_RAT	ENSRNOG00000062657	Ig-like domain-containing protein	1	FVFSLEASASTANLQISNLK	FVFSLEASASTANLQISNLK	3	FVFSLEASASTANLQISNLK3	21325.1	16320.8	14681.6
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	FVFSLVDAMNGK	FVFSLVDAMNGK	2	FVFSLVDAMNGK2	94941.3	93814.6	97258.7
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	FVFTLVGGHISPLLVACEK	FVFTLVGGHISPLLVAC(UniMod:4)EK	3	FVFTLVGGHISPLLVAC(UniMod:4)EK3	16726.6	28678.6	18010.1
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	FVFTPHVEPECLSESAILQK	FVFTPHVEPEC(UniMod:4)LSESAILQK	3	FVFTPHVEPEC(UniMod:4)LSESAILQK3	40037	27686.7	33796.5
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	FVGDADLER	FVGDADLER	2	FVGDADLER2	62925.4	62035.6	79742.5
F1M471	F1M471	F1M471_RAT	Epm2aip1	EPM2A interacting protein 1	1	FVGDEER	FVGDEER	2	FVGDEER2	15568.4	11742.9	13207
A0A0G2K618	A0A0G2K618;Q6P7A1	A0A0G2K618_RAT	Large1	LARGE xylosyl- and glucuronyltransferase 1	0	FVGFGWNK	FVGFGWNK	2	FVGFGWNK2	14991.9	11193.2	7555.24
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	FVGFIVVSCPLK	FVGFIVVSC(UniMod:4)PLK	2	FVGFIVVSC(UniMod:4)PLK2	20791.1	6715.6	20149
P24594	P24594	IBP5_RAT	Igfbp5	Insulin-like growth factor-binding protein 5	1	FVGGAENTAHPR	FVGGAENTAHPR	3	FVGGAENTAHPR3	110477	60171.1	44773.7
P97615	P97615	THIOM_RAT	Txn2	Thioredoxin, mitochondrial	1	FVGIKDEDQLEAFLK	FVGIKDEDQLEAFLK	3	FVGIKDEDQLEAFLK3	36015.3	25838	29559
A0A8I6G604	A0A8I6G604	A0A8I6G604_RAT	Lman2l	Lectin, mannose-binding 2-like	1	FVGLGVFVDTYPNEEK	FVGLGVFVDTYPNEEK	2	FVGLGVFVDTYPNEEK2	11542.6	5426.33	4708.66
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	FVGQDVEGER	FVGQDVEGER	2	FVGQDVEGER2	303572	361860	346671
M0RCS2	M0RCS2	M0RCS2_RAT	Tbl2	Transducin (beta)-like 2	1	FVGSCGFTPDVK	FVGSC(UniMod:4)GFTPDVK	2	FVGSC(UniMod:4)GFTPDVK2	24203.4	18423.3	10228.3
Q5XIN4	Q5XIN4	Q5XIN4_RAT	Mtmr9	Myotubularin related protein 9	1	FVGSLGTIIIK	FVGSLGTIIIK	2	FVGSLGTIIIK2	11343.5	9841.97	12463.4
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	FVGTCCLR	FVGTC(UniMod:4)C(UniMod:4)LR	2	FVGTC(UniMod:4)C(UniMod:4)LR2	6427.71		
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	FVGTDPASDEVVLMK	FVGTDPASDEVVLMK	2	FVGTDPASDEVVLMK2	6790.22	616.707	5855.79
A0A8I6AGS4	A0A8I6AGS4	A0A8I6AGS4_RAT	Abi3bp	ABI family member 3 binding protein	1	FVGVQLCNSLR	FVGVQLC(UniMod:4)NSLR	2	FVGVQLC(UniMod:4)NSLR2	20504.8	9295.95	11709.2
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	FVGYPGDPVYWLGK	FVGYPGDPVYWLGK	2	FVGYPGDPVYWLGK2	99615.7	91896.3	120746
F1LRI5	F1LRI5	F1LRI5_RAT	Gcn1	GCN1 activator of EIF2AK4	1	FVHFIDAPSLALIMPIVQR	FVHFIDAPSLALIMPIVQR	3	FVHFIDAPSLALIMPIVQR3	1444.56	5679.81	1926.46
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	FVHGVRYQCYCYGR	FVHGVRYQC(UniMod:4)YC(UniMod:4)YGR	4	FVHGVRYQC(UniMod:4)YC(UniMod:4)YGR4	6434.05	5745.54	6097.92
A0A8I6A8L3	A0A8I6A8L3	A0A8I6A8L3_RAT	Dnpep	Aspartyl aminopeptidase	1	FVHIERPILR	FVHIERPILR	3	FVHIERPILR3	13170.9	27884.8	17831.3
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	FVHLLDQSDQDFQEELDLMK	FVHLLDQSDQDFQEELDLMK	3	FVHLLDQSDQDFQEELDLMK3	20597.7	25919.5	18392
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	FVHSENQHLVSPEALDFLDK	FVHSENQHLVSPEALDFLDK	3	FVHSENQHLVSPEALDFLDK3	35755.9	21764.9	26178.4
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	FVHSENQHLVSPEALDFLDK	FVHSENQHLVSPEALDFLDK	4	FVHSENQHLVSPEALDFLDK4	156867	139582	144160
G3V6W5	G3V6W5	G3V6W5_RAT	Ifih1	RNA helicase	1	FVIADDTR	FVIADDTR	2	FVIADDTR2	13931.8		19772.1
P21533	P21533	RL6_RAT	Rpl6	Large ribosomal subunit protein eL6	1	FVIATSTK	FVIATSTK	2	FVIATSTK2	84612.2	31364.6	90400.3
F1M9Q3	F1M9Q3	F1M9Q3_RAT	Ltn1	E3 ubiquitin-protein ligase listerin	1	FVIDTPEAPK	FVIDTPEAPK	2	FVIDTPEAPK2	23109.9	27724.9	29440.6
Q56A27	Q56A27	NCBP1_RAT	Ncbp1	Nuclear cap-binding protein subunit 1	1	FVIEENLHCIIK	FVIEENLHC(UniMod:4)IIK	3	FVIEENLHC(UniMod:4)IIK3	3582.47		
D4ADQ1	D4ADQ1	D4ADQ1_RAT	Rrm2b	Ribonucleotide reductase regulatory TP53 inducible subunit M2B	1	FVIFPIQYPDIWK	FVIFPIQYPDIWK	2	FVIFPIQYPDIWK2	9044.89	7697.24	7416.94
P18298	P18298	METK2_RAT	Mat2a	S-adenosylmethionine synthase isoform type-2	1	FVIGGPQGDAGLTGR	FVIGGPQGDAGLTGR	2	FVIGGPQGDAGLTGR2	41651.6	49054.9	43264.8
Q02874	Q02874	H2AY_RAT	Macroh2a1	Core histone macro-H2A.1	1	FVIHCNSPVWGADKCEELLEK	FVIHC(UniMod:4)NSPVWGADKC(UniMod:4)EELLEK	4	FVIHC(UniMod:4)NSPVWGADKC(UniMod:4)EELLEK4	1684.38		
E9PT66	E9PT66	E9PT66_RAT	Sf3b3	Splicing factor 3b, subunit 3	1	FVIHPESNNLIIIETDHNAYTEATK	FVIHPESNNLIIIETDHNAYTEATK	4	FVIHPESNNLIIIETDHNAYTEATK4	16578.7	6121.74	4837.02
O35763	O35763;P31977;Q5PQK5	MOES_RAT	Msn	Moesin	0	FVIKPIDK	FVIKPIDK	2	FVIKPIDK2	15628.9	9939.38	8853.77
P13264	P13264	GLSK_RAT	Gls	Glutaminase kidney isoform, mitochondrial	1	FVIPDFMSFTSHIDELYESAK	FVIPDFMSFTSHIDELYESAK	3	FVIPDFMSFTSHIDELYESAK3	3427.97	6643.78	
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	FVIPSEVKPGCHR	FVIPSEVKPGC(UniMod:4)HR	4	FVIPSEVKPGC(UniMod:4)HR4	23832.9	32130.8	22932.1
A0A8I5ZVU1	A0A8I5ZVU1	A0A8I5ZVU1_RAT	Uckl1	Uridine-cytidine kinase	1	FVKPAFDQYIQPTMR	FVKPAFDQYIQPTMR	3	FVKPAFDQYIQPTMR3	16003.5	15466.3	12430.5
Q5XI79	A0A8I6AKW7;Q5XI79	NDUF7_RAT	Ndufaf7	Protein arginine methyltransferase NDUFAF7, mitochondrial	0	FVLAPCATPAEAFIQR	FVLAPC(UniMod:4)ATPAEAFIQR	3	FVLAPC(UniMod:4)ATPAEAFIQR3	1875.88	2446.66	2010.33
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	FVLAPFTLGVDTHTSGDGK	FVLAPFTLGVDTHTSGDGK	3	FVLAPFTLGVDTHTSGDGK3	1.80532e+06	110558	96521.4
Q07205	Q07205;A0A8I5ZMQ1	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	FVLCPECENPETDLHVNPK	FVLC(UniMod:4)PEC(UniMod:4)ENPETDLHVNPK	3	FVLC(UniMod:4)PEC(UniMod:4)ENPETDLHVNPK3	131045	151111	137726
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	FVLHAVQLVK	FVLHAVQLVK	2	FVLHAVQLVK2	5243.88	7229.22	7017.96
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	FVLHAVQLVK	FVLHAVQLVK	3	FVLHAVQLVK3	125464	107459	114086
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	FVLINWTGEGVNDVR	FVLINWTGEGVNDVR	2	FVLINWTGEGVNDVR2	81695.3	90114.9	73886.9
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	FVLINWTGEGVNDVR	FVLINWTGEGVNDVR	3	FVLINWTGEGVNDVR3	13882.2	16008.9	10228.8
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	FVLINWTGEGVNDVRK	FVLINWTGEGVNDVRK	2	FVLINWTGEGVNDVRK2	6557.9	1841.98	2352.4
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	FVLINWTGEGVNDVRK	FVLINWTGEGVNDVRK	3	FVLINWTGEGVNDVRK3	79986	83535.6	89238.5
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	FVLLETGGQAGITR	FVLLETGGQAGITR	2	FVLLETGGQAGITR2	11466.2	12751.6	11992
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	FVLLPNIDLVMPK	FVLLPNIDLVMPK	2	FVLLPNIDLVMPK2	130345	104299	112240
A0A8I6AWZ3	A0A8I6AWZ3	A0A8I6AWZ3_RAT	Agap1	ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	1	FVLMATPNLSR	FVLMATPNLSR	2	FVLMATPNLSR2	5526.91	3393.3	3640.43
Q07969	Q07969	CD36_RAT	Cd36	Platelet glycoprotein 4	1	FVLPANAFASPLQNPDNHCFCTEK	FVLPANAFASPLQNPDNHC(UniMod:4)FC(UniMod:4)TEK	3	FVLPANAFASPLQNPDNHC(UniMod:4)FC(UniMod:4)TEK3	13031.7	14428.5	17347.6
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	FVLPLQDHTIK	FVLPLQDHTIK	3	FVLPLQDHTIK3	18287.6	15562.3	12628.6
D4A1A5	A0A8I5ZMG6;D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	0	FVLQLLELFDSEDPRER	FVLQLLELFDSEDPRER	3	FVLQLLELFDSEDPRER3	5134.56	4275.16	7150.98
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	FVLQVYR	FVLQVYR	2	FVLQVYR2	30375.6	18039.5	25425.5
Q9JHW1	Q9JHW1	CBPD_RAT	Cpd	Carboxypeptidase D	1	FVLSGNLHGGSVVASYPFDDSPEHK	FVLSGNLHGGSVVASYPFDDSPEHK	4	FVLSGNLHGGSVVASYPFDDSPEHK4	7467.19	6354.52	
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	FVLSSGK	FVLSSGK	1	FVLSSGK1	118928	118119	125526
Q568Z3	Q568Z3	Q568Z3_RAT	Paqr4	Progestin and adipoQ receptor family member 4	1	FVLTGYRPASSGSGCLR	FVLTGYRPASSGSGC(UniMod:4)LR	3	FVLTGYRPASSGSGC(UniMod:4)LR3	72573.4	85934.1	88418.1
Q5FVN1	Q5FVN1	STBD1_RAT	Stbd1	Starch-binding domain-containing protein 1	1	FVLVENK	FVLVENK	2	FVLVENK2	21239.6	26634.7	23242.6
Q641Z9	Q641Z9	Q641Z9_RAT	Sdhc	Succinate dehydrogenase cytochrome b560 subunit, mitochondrial	1	FVLVFPLMYHSLNGVR	FVLVFPLMYHSLNGVR	3	FVLVFPLMYHSLNGVR3	19693.2	8855.11	18267.1
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	FVMKPPQVVR	FVMKPPQVVR	3	FVMKPPQVVR3	307599	341994	284794
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	FVMQEEFSR	FVMQEEFSR	2	FVMQEEFSR2	540993	426681	497990
B2RYU6	B2RYU6	TPC2L_RAT	Trappc2l	Trafficking protein particle complex subunit 2-like protein	1	FVMVVDSSNTALR	FVMVVDSSNTALR	2	FVMVVDSSNTALR2	29683.7	22092.2	26294.5
B2RYU6	B2RYU6	TPC2L_RAT	Trappc2l	Trafficking protein particle complex subunit 2-like protein	1	FVMVVDSSNTALRDNEIR	FVMVVDSSNTALRDNEIR	3	FVMVVDSSNTALRDNEIR3	5447.38	11230.9	7253.36
Q4V892	Q4V892	SIGIR_RAT	Sigirr	Single Ig IL-1-related receptor	1	FVNFILKPQLER	FVNFILKPQLER	3	FVNFILKPQLER3	13972.6	9947.6	
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	FVNLFPEVK	FVNLFPEVK	2	FVNLFPEVK2	38883.4	39369.5	37085.1
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	FVNLGIEPPK	FVNLGIEPPK	2	FVNLGIEPPK2	231102	221284	242093
Q769K2	Q769K2	NAPEP_RAT	Napepld	N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D	1	FVNPWPTWK	FVNPWPTWK	2	FVNPWPTWK2	53328.6	38667.6	75994.2
D3ZMS3	D3ZMS3	D3ZMS3_RAT	Matn4	Matrilin 4	1	FVNQIVDFLDVSPEGTR	FVNQIVDFLDVSPEGTR	2	FVNQIVDFLDVSPEGTR2	3901.99		
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	FVPAEMGMHTVSVK	FVPAEMGMHTVSVK	2	FVPAEMGMHTVSVK2	417612	316804	296857
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	FVPAEMGMHTVSVK	FVPAEMGMHTVSVK	3	FVPAEMGMHTVSVK3	1.80884e+06	1.61135e+06	1.74665e+06
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	FVPEGFTIR	FVPEGFTIR	2	FVPEGFTIR2	30168.4	35399.9	
Q63965	Q9JHY2;Q63965	SFXN1_RAT	Sfxn1	Sideroflexin-1	0	FVPFAAVAAANCINIPLMR	FVPFAAVAAANC(UniMod:4)INIPLMR	3	FVPFAAVAAANC(UniMod:4)INIPLMR3	29898.8	38763.3	39104.4
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	FVPLQNQR	FVPLQNQR	2	FVPLQNQR2	122427	120562	123982
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	FVPMSAK	FVPMSAK	1	FVPMSAK1	44974.6	21191.2	21689.1
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	FVPMSAK	FVPMSAK	2	FVPMSAK2	1.50288e+06	1.35384e+06	1.36331e+06
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	FVPNLPK	FVPNLPK	2	FVPNLPK2	74691.5	63751.4	71735.5
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	FVPVACICR	FVPVAC(UniMod:4)IC(UniMod:4)R	2	FVPVAC(UniMod:4)IC(UniMod:4)R2	73201.7	60325.6	42616.7
D3ZLZ7	D3ZLZ7	IMDH1_RAT	Impdh1	Inosine-5'-monophosphate dehydrogenase 1	1	FVPYLIAGIQHGCQDIGAQSLSVLR	FVPYLIAGIQHGC(UniMod:4)QDIGAQSLSVLR	3	FVPYLIAGIQHGC(UniMod:4)QDIGAQSLSVLR3	20587.3	23749.2	
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	FVPYLIAGIQHSCQDIGAK	FVPYLIAGIQHSC(UniMod:4)QDIGAK	3	FVPYLIAGIQHSC(UniMod:4)QDIGAK3	19310.3	27560.7	24108.5
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	FVPYSYFSR	FVPYSYFSR	2	FVPYSYFSR2	161049	175421	147781
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	FVPYYDLFMPSLK	FVPYYDLFMPSLK	2	FVPYYDLFMPSLK2	53711.4	47254.1	46363.1
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	FVPYYDLFMPSLK	FVPYYDLFMPSLK	3	FVPYYDLFMPSLK3	15546.5	10010.8	13506.8
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	FVQATTCK	FVQATTC(UniMod:4)K	2	FVQATTC(UniMod:4)K2	18395.3	9029.53	16075.7
Q6AZ50	Q6AZ50	ATG3_RAT	Atg3	Ubiquitin-like-conjugating enzyme ATG3	1	FVQAVIPTIEYDYTR	FVQAVIPTIEYDYTR	2	FVQAVIPTIEYDYTR2	19044.3	13079.3	6987.69
Q6AZ50	Q6AZ50	ATG3_RAT	Atg3	Ubiquitin-like-conjugating enzyme ATG3	1	FVQAVIPTIEYDYTR	FVQAVIPTIEYDYTR	3	FVQAVIPTIEYDYTR3	4300.14	3741.13	
P01015	P01015	ANGT_RAT	Agt	Angiotensinogen	1	FVQAVTGWK	FVQAVTGWK	2	FVQAVTGWK2	270096	285647	259399
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	FVQCPDGELQK	FVQC(UniMod:4)PDGELQK	2	FVQC(UniMod:4)PDGELQK2	45974.1	49391.6	51912.3
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	FVQDAQNK	FVQDAQNK	1	FVQDAQNK1	2573.44	3493.71	1420.1
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	FVQDAQNK	FVQDAQNK	2	FVQDAQNK2	123382	149942	120449
Q6GQP4	Q6GQP4	RAB31_RAT	Rab31	Ras-related protein Rab-31	1	FVQDHFDHNISPTIGASFMTK	FVQDHFDHNISPTIGASFMTK	3	FVQDHFDHNISPTIGASFMTK3	18242	15994.2	14285
Q6GQP4	Q6GQP4	RAB31_RAT	Rab31	Ras-related protein Rab-31	1	FVQDHFDHNISPTIGASFMTK	FVQDHFDHNISPTIGASFMTK	4	FVQDHFDHNISPTIGASFMTK4	82334.5	85137.8	71286.8
A0A0G2K975	A0A0G2K975	A0A0G2K975_RAT	Cfhr4	Similar to complement factor H-related protein	1	FVQDQSVK	FVQDQSVK	2	FVQDQSVK2	23870.1	26044.6	29232.7
Q5U1Z2	Q5U1Z2	TPPC3_RAT	Trappc3	Trafficking protein particle complex subunit 3	1	FVQDTLK	FVQDTLK	2	FVQDTLK2	87505	87735.7	101770
A0A8I6A4G0	A0A8I6A4G0;A0A8I6AEG8;A0A8I6A502	A0A8I6A4G0_RAT	Tns1	Tensin 1	0	FVQDTSK	FVQDTSK	2	FVQDTSK2	40489.6	24870.3	38787.3
D3ZYT6	D3ZYT6	D3ZYT6_RAT	Treml1	Triggering receptor expressed on myeloid cells-like 1	1	FVQEGCRPLVTSAVDR	FVQEGC(UniMod:4)RPLVTSAVDR	2	FVQEGC(UniMod:4)RPLVTSAVDR2	22925.1	12774.4	16490.7
D3ZYT6	D3ZYT6	D3ZYT6_RAT	Treml1	Triggering receptor expressed on myeloid cells-like 1	1	FVQEGCRPLVTSAVDR	FVQEGC(UniMod:4)RPLVTSAVDR	3	FVQEGC(UniMod:4)RPLVTSAVDR3	5.14721e+06	5.19457e+06	5.97595e+06
D3ZYT6	D3ZYT6	D3ZYT6_RAT	Treml1	Triggering receptor expressed on myeloid cells-like 1	1	FVQEGCRPLVTSAVDRR	FVQEGC(UniMod:4)RPLVTSAVDRR	3	FVQEGC(UniMod:4)RPLVTSAVDRR3	11216.6	10078.3	22584.3
D3ZYT6	D3ZYT6	D3ZYT6_RAT	Treml1	Triggering receptor expressed on myeloid cells-like 1	1	FVQEGCRPLVTSAVDRR	FVQEGC(UniMod:4)RPLVTSAVDRR	4	FVQEGC(UniMod:4)RPLVTSAVDRR4	53159.3	44289.4	57945.3
P12007	P12007	IVD_RAT	Ivd	Isovaleryl-CoA dehydrogenase, mitochondrial	1	FVQENLAPK	FVQENLAPK	2	FVQENLAPK2	28055.8	30266.7	33430.2
P58751	P58751	RELN_RAT	Reln	Reelin	1	FVQFFMR	FVQFFMR	2	FVQFFMR2	271623	377525	320062
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	FVQGLDIGPK	FVQGLDIGPK	2	FVQGLDIGPK2	298229	274965	280100
Q9JHY1	Q9JHY1	JAM1_RAT	F11r	Junctional adhesion molecule A	1	FVQGSTTALVCYNNQITVPYADR	FVQGSTTALVC(UniMod:4)YNNQITVPYADR	3	FVQGSTTALVC(UniMod:4)YNNQITVPYADR3	225599	253078	246288
Q0Z843	Q0Z843	Q0Z843_RAT	Fig4	FIG4 phosphoinositide 5-phosphatase	1	FVQLGQSQHR	FVQLGQSQHR	3	FVQLGQSQHR3	6056.31	4688.03	2771.44
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	FVQLINTVLNGDQHFMSALDK	FVQLINTVLNGDQHFMSALDK	3	FVQLINTVLNGDQHFMSALDK3	14262.6	8330.97	24334.8
D3ZDI7	D3ZDI7	D3ZDI7_RAT	Ppp2r5a	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	FVQQLLELFDSEDPRER	FVQQLLELFDSEDPRER	3	FVQQLLELFDSEDPRER3	11198.6	7100.4	8913.52
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	FVQVSEDSGR	FVQVSEDSGR	2	FVQVSEDSGR2	38357.7	40059.2	49030.6
D3ZPP3	D3ZPP3	D3ZPP3_RAT	Psd4	Pleckstrin and Sec7 domain containing 4	1	FVRPILPMGPAQSSLEEQHR	FVRPILPMGPAQSSLEEQHR	4	FVRPILPMGPAQSSLEEQHR4	6793.85	8047.9	3213.99
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	FVSAMPK	FVSAMPK	2	FVSAMPK2	56323.2	72963.5	62361
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	FVSCLLEQPEVAVTGAGR	FVSC(UniMod:4)LLEQPEVAVTGAGR	2	FVSC(UniMod:4)LLEQPEVAVTGAGR2	59327.2	59651.1	66608.2
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	FVSCLLEQPEVAVTGAGR	FVSC(UniMod:4)LLEQPEVAVTGAGR	3	FVSC(UniMod:4)LLEQPEVAVTGAGR3	28794.2	29522.6	28728.6
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	FVSDDSICVLGIQK	FVSDDSIC(UniMod:4)VLGIQK	2	FVSDDSIC(UniMod:4)VLGIQK2	137772	121175	123595
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	FVSDDSICVLGIQK	FVSDDSIC(UniMod:4)VLGIQK	3	FVSDDSIC(UniMod:4)VLGIQK3	9868.89	12633	11136.8
F1M798	F1M280;F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	0	FVSDGSINK	FVSDGSINK	2	FVSDGSINK2	97238.3	91895	107997
Q9QWJ9	Q9QWJ9	NRP1_RAT	Nrp1	Neuropilin-1	1	FVSDYETHGAGFSIR	FVSDYETHGAGFSIR	3	FVSDYETHGAGFSIR3	30721.5	39146.4	32080.9
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	FVSEDDRNNFTLK	FVSEDDRNNFTLK	2	FVSEDDRNNFTLK2	8763.82	10101.4	8211.13
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	FVSEDDRNNFTLK	FVSEDDRNNFTLK	3	FVSEDDRNNFTLK3	962313	1.1023e+06	1.1382e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	FVSELWK	FVSELWK	1	FVSELWK1	116595	121656	126067
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	FVSELWK	FVSELWK	2	FVSELWK2	17420.6	25331.4	28143.3
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	FVSELWKDVDR	FVSELWKDVDR	2	FVSELWKDVDR2	26465	42112	41164.2
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	FVSELWKDVDR	FVSELWKDVDR	3	FVSELWKDVDR3	676713	1.04198e+06	1.14256e+06
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	FVSEMLQK	FVSEMLQK	2	FVSEMLQK2	148556	121668	142088
F7FLA1	F7FLA1	F7FLA1_RAT	Slc35b2	Solute carrier family 35 member B2	1	FVSFPTQVLAK	FVSFPTQVLAK	2	FVSFPTQVLAK2	40279.4	41353	62045.8
A0A0G2JTY3	A0A0G2JTY3	A0A0G2JTY3_RAT	Slc37a4	Solute carrier family 37 member 4	1	FVSGVLSDQMSAR	FVSGVLSDQMSAR	2	FVSGVLSDQMSAR2	7195.95	7758.77	8909.03
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	FVSISDLFVPK	FVSISDLFVPK	2	FVSISDLFVPK2	79131.4	69364.1	96356.6
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	FVSLAELQ	FVSLAELQ	1	FVSLAELQ1	3883.98	4158.05	5943.14
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	FVSLAELQ	FVSLAELQ	2	FVSLAELQ2		6471.96	3774.22
B5DEP5	B5DEP5	B5DEP5_RAT	Trip4	Thyroid hormone receptor interactor 4	1	FVSLYTR	FVSLYTR	2	FVSLYTR2	48442.7	35865.2	39358.8
A0A8I6A282	A0A8I6A282	A0A8I6A282_RAT	Antxr2	Anthrax toxin receptor	1	FVSPEMR	FVSPEMR	2	FVSPEMR2	69657.8	59893.1	72318.8
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	FVSPIYFTDCNLR	FVSPIYFTDC(UniMod:4)NLR	2	FVSPIYFTDC(UniMod:4)NLR2	13705.6	6586.92	12524.8
Q5FWS5	Q5FWS5	Q5FWS5_RAT	Loxl1	Lysyl oxidase homolog	1	FVSTTNCK	FVSTTNC(UniMod:4)K	2	FVSTTNC(UniMod:4)K2	252687	240757	261491
Q6IMF3	Q6IMF3	K2C1_RAT	Krt1	Keratin, type II cytoskeletal 1	1	FVSTTYSR	FVSTTYSR	2	FVSTTYSR2	12312.2	12868	17179.2
Q9QWJ9	Q9QWJ9	NRP1_RAT	Nrp1	Neuropilin-1	1	FVTAVGTQGAISK	FVTAVGTQGAISK	2	FVTAVGTQGAISK2	33430.1	27060	32354.4
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	FVTDSNAVVQLK	FVTDSNAVVQLK	2	FVTDSNAVVQLK2	78942.9	72884.4	77829.1
B2GUX7	B2GUX7	B2GUX7_RAT	Creg1	Cellular repressor of E1A-stimulated genes 1	1	FVTHVSDWGSLATISTR	FVTHVSDWGSLATISTR	3	FVTHVSDWGSLATISTR3	7325.85	5802.9	11825.4
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	FVTISGQK	FVTISGQK	2	FVTISGQK2	104368	112667	89925.6
P20611	P20611	PPAL_RAT	Acp2	Lysosomal acid phosphatase	1	FVTLLYR	FVTLLYR	2	FVTLLYR2	99081.7	93067.3	99172.7
D3ZP15	D3ZP15	D3ZP15_RAT	Rab9b	RAB9B, member RAS oncogene family	1	FVTLQIWDTAGQER	FVTLQIWDTAGQER	2	FVTLQIWDTAGQER2		11697.7	
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	FVTQWGEESSGSSPR	FVTQWGEESSGSSPR	2	FVTQWGEESSGSSPR2	43653.6	62766.7	45835.8
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	FVTSCSRPPLLGFK	FVTSC(UniMod:4)SRPPLLGFK	3	FVTSC(UniMod:4)SRPPLLGFK3	158108	167746	166307
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	FVTTEFEPCFDAADFIR	FVTTEFEPC(UniMod:4)FDAADFIR	3	FVTTEFEPC(UniMod:4)FDAADFIR3	67392.9	46350.6	40705.5
P00507	A0A8I6GJD2;P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	0	FVTVQTISGTGALR	FVTVQTISGTGALR	2	FVTVQTISGTGALR2	199477	181744	173080
P00507	A0A8I6GJD2;P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	0	FVTVQTISGTGALR	FVTVQTISGTGALR	3	FVTVQTISGTGALR3	25595.2	26423.2	18095.1
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	FVVDGVEVSITTSK	FVVDGVEVSITTSK	2	FVVDGVEVSITTSK2	6915.14	5875.21	11592.1
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	FVVDLSDQVAPTDIEEGMR	FVVDLSDQVAPTDIEEGMR	3	FVVDLSDQVAPTDIEEGMR3	62325	66563.2	65929.3
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	FVVDVDK	FVVDVDK	2	FVVDVDK2	278674	222696	255524
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	FVVDVDKNIDINDVTPNCR	FVVDVDKNIDINDVTPNC(UniMod:4)R	3	FVVDVDKNIDINDVTPNC(UniMod:4)R3	68766.6	57693.3	75654.4
P27605	P27605	HPRT_RAT	Hprt1	Hypoxanthine-guanine phosphoribosyltransferase	1	FVVGYALDYNEHFR	FVVGYALDYNEHFR	3	FVVGYALDYNEHFR3	9868.71	8553.38	10598.6
Q69BT7	Q69BT7	TPPC4_RAT	Trappc4	Trafficking protein particle complex subunit 4	1	FVVLADPR	FVVLADPR	2	FVVLADPR2	29345.1	15038.5	10202.6
P11497	E9PSQ0;P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	0	FVVMVTPEDLK	FVVMVTPEDLK	2	FVVMVTPEDLK2	20934	13859.8	18139.4
P16036	P16036	S25A3_RAT	Slc25a3	Solute carrier family 25 member 3	1	FVVPKPR	FVVPKPR	2	FVVPKPR2	227812	206081	182065
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	FVVQNVSAQK	FVVQNVSAQK	2	FVVQNVSAQK2	94579.8	87084.5	100150
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	FVVSYVSAGNQR	FVVSYVSAGNQR	2	FVVSYVSAGNQR2	28473.4	32216.6	24674.9
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	FVVVCGDGEYIIYTAMALR	FVVVC(UniMod:4)GDGEYIIYTAMALR	3	FVVVC(UniMod:4)GDGEYIIYTAMALR3	2331.87	4572.05	5196.88
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	FVVVFNPLEQER	FVVVFNPLEQER	2	FVVVFNPLEQER2	40371.2	51010.3	49724
Q8K4V4	Q8K4V4	SNX27_RAT	Snx27	Sorting nexin-27	1	FVVYNVYMAGR	FVVYNVYMAGR	2	FVVYNVYMAGR2	13903.4	13846.5	7954.19
Q80T18	Q80T18	GMFG_RAT	Gmfg	Glia maturation factor gamma	1	FVVYSYK	FVVYSYK	2	FVVYSYK2	129024	112731	117153
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	FVWNGHLLR	FVWNGHLLR	2	FVWNGHLLR2	27908.7	34428.4	27473.5
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	FVWNGHLLR	FVWNGHLLR	3	FVWNGHLLR3	326856	320632	410605
Q5U2M6	A0A8I5ZQG9;Q5U2M6	DCAF8_RAT	Dcaf8	DDB1- and CUL4-associated factor 8	0	FVYEACGAR	FVYEAC(UniMod:4)GAR	2	FVYEAC(UniMod:4)GAR2	15068.9	22496.8	14708
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	FVYEGSADFSCLPTFGVIVAQK	FVYEGSADFSC(UniMod:4)LPTFGVIVAQK	3	FVYEGSADFSC(UniMod:4)LPTFGVIVAQK3	4315.1	5807.64	5622.79
D3ZIF6	D3ZIF6	D3ZIF6_RAT	LOC100360095	Urinary protein 1-like	1	FVYGNQSCAECSGR	FVYGNQSC(UniMod:4)AEC(UniMod:4)SGR	2	FVYGNQSC(UniMod:4)AEC(UniMod:4)SGR2	5830.17	3996.92	4432.84
P58751	P58751	RELN_RAT	Reln	Reelin	1	FVYLELPAAAK	FVYLELPAAAK	2	FVYLELPAAAK2	298197	389150	373417
A0A8I6A2W7	A0A8I6A2W7	A0A8I6A2W7_RAT	ENSRNOG00000063289	ADP/ATP translocase	1	FVYPLDFAR	FVYPLDFAR	2	FVYPLDFAR2	14393.6	7787.41	7683.7
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	FVYSWIGR	FVYSWIGR	2	FVYSWIGR2	80435.4	73718.3	69111.5
P10959	P10959;Q63108;Q64573;Q63010;F1LQJ4	EST1C_RAT	Ces1c	Carboxylesterase 1C	0	FWANFAR	FWANFAR	2	FWANFAR2	348015	356669	299754
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	FWATPLHSITMR	FWATPLHSITMR	3	FWATPLHSITMR3	5095.18	10099	10219.6
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	FWAYEQYK	FWAYEQYK	2	FWAYEQYK2	347169	367652	351944
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	FWAYEQYKK	FWAYEQYKK	2	FWAYEQYKK2	13361.7	9627.06	16955.3
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	FWAYEQYKK	FWAYEQYKK	3	FWAYEQYKK3	76749.5	100040	100897
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	FWCQQLAMPQHIK	FWC(UniMod:4)QQLAMPQHIK	3	FWC(UniMod:4)QQLAMPQHIK3	18189.6	16530.9	15608.5
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	FWCQVIFDESLQK	FWC(UniMod:4)QVIFDESLQK	2	FWC(UniMod:4)QVIFDESLQK2	4237.31	10551.2	8848.51
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	FWCQVIFDESLQK	FWC(UniMod:4)QVIFDESLQK	3	FWC(UniMod:4)QVIFDESLQK3	4898.79	6652.44	6416.17
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	FWDDCIK	FWDDC(UniMod:4)IK	2	FWDDC(UniMod:4)IK2	16370.2	13111.3	19646.3
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	FWDLVSPER	FWDLVSPER	2	FWDLVSPER2	27630.6	30845.4	32656.4
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	FWDPGPSADPLMDLR	FWDPGPSADPLMDLR	2	FWDPGPSADPLMDLR2	20060.5	22403.9	11082.7
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	FWEGLTNVR	FWEGLTNVR	2	FWEGLTNVR2	22589.7	16465.1	27476.5
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	FWEVIGEEHGIDCAGSYCGTSALQLER	FWEVIGEEHGIDC(UniMod:4)AGSYC(UniMod:4)GTSALQLER	4	FWEVIGEEHGIDC(UniMod:4)AGSYC(UniMod:4)GTSALQLER4	100536	148856	114467
P85108	P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	FWEVISDEHGIDPTGSYHGDSDLQLER	FWEVISDEHGIDPTGSYHGDSDLQLER	4	FWEVISDEHGIDPTGSYHGDSDLQLER4	1.65324e+06	1.90363e+06	1.63236e+06
P69897	P69897	TBB5_RAT	Tubb5	Tubulin beta-5 chain	1	FWEVISDEHGIDPTGTYHGDSDLQLDR	FWEVISDEHGIDPTGTYHGDSDLQLDR	4	FWEVISDEHGIDPTGTYHGDSDLQLDR4	1.10506e+06	1.21718e+06	1.03265e+06
Q6P9T8	Q6P9T8;B4F7C2	TBB4B_RAT	Tubb4b	Tubulin beta-4B chain	0	FWEVISDEHGIDPTGTYHGDSDLQLER	FWEVISDEHGIDPTGTYHGDSDLQLER	4	FWEVISDEHGIDPTGTYHGDSDLQLER4	1.00913e+06	1.01195e+06	860314
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	FWFAHNVLFNVSNR	FWFAHNVLFNVSNR	3	FWFAHNVLFNVSNR3	10870.3	4154.63	12331.6
D3ZX06	D3ZX06	D3ZX06_RAT	Ghdc	GH3 domain containing	1	FWGSVGPAK	FWGSVGPAK	2	FWGSVGPAK2	8703.26	10326.8	12220.4
Q498C8	Q498C8	RER1_RAT	Rer1	Protein RER1	1	FWHAATK	FWHAATK	2	FWHAATK2	7126.07	9000.12	8878.76
Q66HF6	Q66HF6	Q66HF6_RAT	Tinag	Tubulointerstitial nephritis antigen	1	FWIAANSWGK	FWIAANSWGK	2	FWIAANSWGK2	14368.9	17964.5	16627.3
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	FWIGLQR	FWIGLQR	2	FWIGLQR2	1.26701e+06	1.33098e+06	1.35694e+06
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	FWLEAESFHSTTWSR	FWLEAESFHSTTWSR	3	FWLEAESFHSTTWSR3	12671.8	2884.64	4845.78
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	FWLSDCPR	FWLSDC(UniMod:4)PR	2	FWLSDC(UniMod:4)PR2	21294.7	12639.8	17370.7
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	FWNAAFFDAVHCER	FWNAAFFDAVHC(UniMod:4)ER	2	FWNAAFFDAVHC(UniMod:4)ER2	11604.7	7671.27	5654.27
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	FWNAAFFDAVHCER	FWNAAFFDAVHC(UniMod:4)ER	3	FWNAAFFDAVHC(UniMod:4)ER3	67697.8	78055	68046.1
D3ZZ21	D3ZZ21	D3ZZ21_RAT	Ndufb6	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6	1	FWNNFLR	FWNNFLR	2	FWNNFLR2	140201	128450	127345
Q9Z2K5	Q9Z2K5	LST8_RAT	Mlst8	Target of rapamycin complex subunit LST8	1	FWQAHSGICTR	FWQAHSGIC(UniMod:4)TR	3	FWQAHSGIC(UniMod:4)TR3	11654.5	15567.3	12298.4
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	FWQAYPSAEDVLQK	FWQAYPSAEDVLQK	2	FWQAYPSAEDVLQK2	60556.2	57540.7	56986
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	FWQAYPSAEDVLQK	FWQAYPSAEDVLQK	3	FWQAYPSAEDVLQK3	5016.1	4726.91	6044.64
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	FWQDLMNIAGTTLSSK	FWQDLMNIAGTTLSSK	2	FWQDLMNIAGTTLSSK2	58796.8	90121.9	76154.1
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	FWQDLMNIAGTTLSSK	FWQDLMNIAGTTLSSK	3	FWQDLMNIAGTTLSSK3	50617.7	37557.1	55478.1
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	FWQIYIEGQDEPR	FWQIYIEGQDEPR	2	FWQIYIEGQDEPR2	11363.7	9801.82	6997.35
A0A8I6GJC3	A0A8I6GJC3;A0A8I6GKS7	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	0	FWSFFLR	FWSFFLR	2	FWSFFLR2	11740.5	15247.1	18015.6
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	FWSFVEASQNIGSSDQHDTDR	FWSFVEASQNIGSSDQHDTDR	3	FWSFVEASQNIGSSDQHDTDR3	11650.2	6630.2	11571.7
Q642B0	Q642B0	Q642B0_RAT	Gpc4	Glypican 4	1	FWSSLPSTVCNDER	FWSSLPSTVC(UniMod:4)NDER	2	FWSSLPSTVC(UniMod:4)NDER2	67920.8	67350.3	51031.3
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	FWTAMFSDK	FWTAMFSDK	2	FWTAMFSDK2	17479.8	20831.3	18357.5
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	FWTAMFSDKK	FWTAMFSDKK	3	FWTAMFSDKK3	4159.11	6129.94	8227.57
Q6ED65	Q6ED65	EMAL5_RAT	Eml5	Echinoderm microtubule-associated protein-like 5	1	FWTLAGR	FWTLAGR	2	FWTLAGR2	31207	28236.9	29547.1
Q63448	Q63448	ACOX3_RAT	Acox3	Peroxisomal acyl-coenzyme A oxidase 3	1	FWVGNLGK	FWVGNLGK	2	FWVGNLGK2	35990.5	37444.8	60596.4
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	FWVLAAHPNLNLFAAGHDGGMIVFK	FWVLAAHPNLNLFAAGHDGGMIVFK	3	FWVLAAHPNLNLFAAGHDGGMIVFK3		13844.2	
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	FWVLAAHPNLNLFAAGHDGGMIVFK	FWVLAAHPNLNLFAAGHDGGMIVFK	4	FWVLAAHPNLNLFAAGHDGGMIVFK4	5986.26	12130.1	9062.03
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	FWVNMIK	FWVNMIK	2	FWVNMIK2	91796.2	98533.3	107006
G3V904	G3V904	G3V904_RAT	Pld4	Phospholipase D family, member 4	1	FWVVDGR	FWVVDGR	2	FWVVDGR2	11887.5	13825.9	12620.5
A0A0G2K1A2	A0A0G2K1A2	A0A0G2K1A2_RAT	Mpo	Myeloperoxidase	1	FWWENPGVFSK	FWWENPGVFSK	2	FWWENPGVFSK2	35770.1	22446.9	18097.3
P62718	P62718;A0A8I6GBN0	RL18A_RAT	Rpl18a	Large ribosomal subunit protein eL20	0	FWYFVSQLK	FWYFVSQLK	2	FWYFVSQLK2	28805.8	42874.6	30193.8
P62718	P62718;A0A8I6GBN0	RL18A_RAT	Rpl18a	Large ribosomal subunit protein eL20	0	FWYFVSQLKK	FWYFVSQLKK	3	FWYFVSQLKK3	5919.67	7240.11	8045.14
P68182	P68182;P27791	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	0	FYAAQIVLTFEYLHSLDLIYR	FYAAQIVLTFEYLHSLDLIYR	3	FYAAQIVLTFEYLHSLDLIYR3	4403.48		
P38918	P38918	ARK73_RAT	Akr7a3	Aflatoxin B1 aldehyde reductase member 3	1	FYAFNPLAGGLLTGR	FYAFNPLAGGLLTGR	2	FYAFNPLAGGLLTGR2	6032	1415.04	6571.58
P18418	D3ZYM6;P18418	CALR_RAT	Calr	Calreticulin	0	FYALSAR	FYALSAR	2	FYALSAR2	4.57915e+06	5.11636e+06	5.26022e+06
G3V996	G3V996	G3V996_RAT	Letmd1	LETM1 domain containing 1	1	FYALYTTFIK	FYALYTTFIK	2	FYALYTTFIK2	5586.07	3450.68	4637.45
Q8CG45	Q8CG45	ARK72_RAT	Akr7a2	Aflatoxin B1 aldehyde reductase member 2	1	FYAYNPLAGGLLTGK	FYAYNPLAGGLLTGK	2	FYAYNPLAGGLLTGK2	11825.9	5549.45	23788.6
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	FYDANYDGK	FYDANYDGK	2	FYDANYDGK2	580021	578218	674333
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	FYDANYDGKEYDPVEAR	FYDANYDGKEYDPVEAR	3	FYDANYDGKEYDPVEAR3	46287.9	52749.1	48565.2
O70595	O70595	ABCB6_RAT	Abcb6	ATP-binding cassette sub-family B member 6	1	FYDISSGCIR	FYDISSGC(UniMod:4)IR	2	FYDISSGC(UniMod:4)IR2	30653.9	36980.3	29358
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	FYDLSSK	FYDLSSK	2	FYDLSSK2	147652	155566	152491
P70483	P70483	STRN_RAT	Strn	Striatin	1	FYDNNTGK	FYDNNTGK	2	FYDNNTGK2	235312	229111	268070
Q5RKI8	Q5RKI8	MITOS_RAT	Abcb8	Mitochondrial potassium channel ATP-binding subunit	1	FYDPTAGVVTLDGHDLR	FYDPTAGVVTLDGHDLR	3	FYDPTAGVVTLDGHDLR3	4040.62	3134.63	
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	FYDQLNHHIFELVSSSDANER	FYDQLNHHIFELVSSSDANER	3	FYDQLNHHIFELVSSSDANER3	2893.53	6558	
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	FYDQLNHHIFELVSSSDANER	FYDQLNHHIFELVSSSDANER	4	FYDQLNHHIFELVSSSDANER4	14466.9	9392.82	11308.2
Q64303	Q64303	PAK2_RAT	Pak2	Serine/threonine-protein kinase PAK 2	1	FYDSNTVK	FYDSNTVK	2	FYDSNTVK2	74274.1	70159.2	83060.2
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	FYDVELENLER	FYDVELENLER	2	FYDVELENLER2	28381.2	31440.3	29189.8
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	FYEADCYIVLK	FYEADC(UniMod:4)YIVLK	2	FYEADC(UniMod:4)YIVLK2	59411.8	60160.3	70291.4
A0A8I6A6H8	A0A8I6A6H8;A0A8I5ZQA7	A0A8I6A6H8_RAT	Serpinb6a	Serpin family B member 6A	0	FYEAEMEELDFK	FYEAEMEELDFK	2	FYEAEMEELDFK2	82699.1	73589.9	80526.6
P34058	P34058;A0A8I6AUX1	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	FYEAFSK	FYEAFSK	1	FYEAFSK1	15849.4	35687.8	41905.3
P34058	P34058;A0A8I6AUX1	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	FYEAFSK	FYEAFSK	2	FYEAFSK2	666375	1.91428e+06	1.56602e+06
Q32KJ6	Q32KJ6	GALNS_RAT	Galns	N-acetylgalactosamine-6-sulfatase	1	FYEEFPINLK	FYEEFPINLK	2	FYEEFPINLK2	41720.9	28532.6	20255.6
Q5U2Z3	Q9Z2G8;Q5U2Z3	NP1L4_RAT	Nap1l4	Nucleosome assembly protein 1-like 4	0	FYEEVHDLER	FYEEVHDLER	2	FYEEVHDLER2	162634	117492	114192
Q5U2Z3	Q9Z2G8;Q5U2Z3	NP1L4_RAT	Nap1l4	Nucleosome assembly protein 1-like 4	0	FYEEVHDLER	FYEEVHDLER	3	FYEEVHDLER3	1.25995e+06	1.33821e+06	1.25335e+06
Q5U2Z3	Q9Z2G8;Q5U2Z3	NP1L4_RAT	Nap1l4	Nucleosome assembly protein 1-like 4	0	FYEEVHDLERK	FYEEVHDLERK	2	FYEEVHDLERK2	8973.38	3469.59	2511.4
Q5U2Z3	Q9Z2G8;Q5U2Z3	NP1L4_RAT	Nap1l4	Nucleosome assembly protein 1-like 4	0	FYEEVHDLERK	FYEEVHDLERK	3	FYEEVHDLERK3	414528	421350	443193
B0BN65	B0BN65	B0BN65_RAT	Cyria	CYFIP related Rac1 interactor A	1	FYEFSIR	FYEFSIR	2	FYEFSIR2	19208.4	20749.1	20073.5
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	FYEGPELVADSNVVLDTAMR	FYEGPELVADSNVVLDTAMR	3	FYEGPELVADSNVVLDTAMR3	104727	213807	123906
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	FYEGSELVADSGVTIDTTMR	FYEGSELVADSGVTIDTTMR	3	FYEGSELVADSGVTIDTTMR3	102899	85054.3	64716.6
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	FYEGTFNWESVK	FYEGTFNWESVK	2	FYEGTFNWESVK2	39173.9	52091.5	37044.8
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	FYELTQK	FYELTQK	2	FYELTQK2	19642.9	22056.4	19888.4
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	FYEQFSK	FYEQFSK	1	FYEQFSK1	11358.4	14094.9	6593.08
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	FYEQFSK	FYEQFSK	2	FYEQFSK2	275671	315062	282710
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	FYEQMNGPVTAGSR	FYEQMNGPVTAGSR	2	FYEQMNGPVTAGSR2	234267	242662	233863
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	FYEQMNGPVTAGSR	FYEQMNGPVTAGSR	3	FYEQMNGPVTAGSR3	51186.3	61844.6	50890.1
Q5XIP1	Q5XIP1	PELO_RAT	Pelo	Protein pelota homolog	1	FYEQVVQAIQR	FYEQVVQAIQR	2	FYEQVVQAIQR2	45456.4	49893.6	51400.8
Q5XIP1	Q5XIP1	PELO_RAT	Pelo	Protein pelota homolog	1	FYEQVVQAIQR	FYEQVVQAIQR	3	FYEQVVQAIQR3	13872.9	9582.84	19299.5
P58751	P58751	RELN_RAT	Reln	Reelin	1	FYFAMGGTCDPGDSHENDVILYAK	FYFAMGGTC(UniMod:4)DPGDSHENDVILYAK	3	FYFAMGGTC(UniMod:4)DPGDSHENDVILYAK3	53915.4	69989.1	62411.8
P11730	P11730	KCC2G_RAT	Camk2g	Calcium/calmodulin-dependent protein kinase type II subunit gamma	1	FYFENLLSK	FYFENLLSK	2	FYFENLLSK2	79304.7	79128.5	92101.7
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	FYFHDGVR	FYFHDGVR	2	FYFHDGVR2	38539.8	40264.7	23091.2
A0A096MKE0	A0A096MKE0	A0A096MKE0_RAT	Asph	Aspartate-beta-hydroxylase	1	FYFHLGDAMQR	FYFHLGDAMQR	3	FYFHLGDAMQR3	5542.45	10001.4	3871.93
Q6IN36	Q6IN36	WIPF1_RAT	Wipf1	WAS/WASL-interacting protein family member 1	1	FYFHPISDLPPPEPYVPTTK	FYFHPISDLPPPEPYVPTTK	3	FYFHPISDLPPPEPYVPTTK3	94989.4	70984.7	52158.7
D4AC93	D4AC93	D4AC93_RAT	Tmem223	Transmembrane protein 223	1	FYFLLDK	FYFLLDK	2	FYFLLDK2	12471.7	18355.9	15169.2
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	FYFPHWYCSGSNR	FYFPHWYC(UniMod:4)SGSNR	2	FYFPHWYC(UniMod:4)SGSNR2	5043.13	13324.5	
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	FYFPHWYCSGSNR	FYFPHWYC(UniMod:4)SGSNR	3	FYFPHWYC(UniMod:4)SGSNR3		8661.11	19522.3
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	FYFVGDEDLLEIIGNSK	FYFVGDEDLLEIIGNSK	2	FYFVGDEDLLEIIGNSK2	21137.4	22992	23630.7
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	FYFVGDEDLLEIIGNSK	FYFVGDEDLLEIIGNSK	3	FYFVGDEDLLEIIGNSK3	12424.3	13142.7	12304.5
P47196	P47196	AKT1_RAT	Akt1	RAC-alpha serine/threonine-protein kinase	1	FYGAEIVSALDYLHSEK	FYGAEIVSALDYLHSEK	3	FYGAEIVSALDYLHSEK3	4373.21	4257.71	2537.02
Q63484	Q63484	AKT3_RAT	Akt3	RAC-gamma serine/threonine-protein kinase	1	FYGAEIVSALDYLHSGK	FYGAEIVSALDYLHSGK	3	FYGAEIVSALDYLHSGK3	11541.4	11447.6	12690.4
Q5XI42	A0A8I6ACF4;A0A8I6AW67;Q5XI42;A0A8I6AKN2	AL3B1_RAT	Aldh3b1	Aldehyde dehydrogenase family 3 member B1	0	FYGDNPQTSPNLGR	FYGDNPQTSPNLGR	2	FYGDNPQTSPNLGR2	3614.75	5305.2	9391.41
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	FYGDQEK	FYGDQEK	1	FYGDQEK1	15158.8	8056.7	13054.5
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	FYGDQEK	FYGDQEK	2	FYGDQEK2	2.03613e+06	2.22018e+06	2.30247e+06
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	FYGDQEKDK	FYGDQEKDK	2	FYGDQEKDK2		1.99212e+06	
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	FYGDQEKDKGLQTSQDAR	FYGDQEKDKGLQTSQDAR	3	FYGDQEKDKGLQTSQDAR3	7449.79	4420.33	9439.99
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	FYGDQEKDKGLQTSQDAR	FYGDQEKDKGLQTSQDAR	4	FYGDQEKDKGLQTSQDAR4	9845.19	7957.93	26429.7
Q6AY30	Q6AY30	SCPDL_RAT	Sccpdh	Saccharopine dehydrogenase-like oxidoreductase	1	FYGEPVVK	FYGEPVVK	2	FYGEPVVK2	194552	200425	193884
A0A8I6A2A6	A0A8I6A2A6	A0A8I6A2A6_RAT	Spata5	Spermatogenesis associated 5	1	FYGETEAR	FYGETEAR	2	FYGETEAR2	4003.59	4755.94	
Q5I6B8	Q5I6B8	PI51C_RAT	Pip5k1c	Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma	1	FYGLYCVQSGGK	FYGLYC(UniMod:4)VQSGGK	2	FYGLYC(UniMod:4)VQSGGK2	17426.8	15596.2	8339.88
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	FYGNSLSAILEGEAR	FYGNSLSAILEGEAR	2	FYGNSLSAILEGEAR2	3196.4	6502.79	3358.03
Q5XIU9	Q5XIU9	PGRC2_RAT	Pgrmc2	Membrane-associated progesterone receptor component 2	1	FYGPAGPYGIFAGR	FYGPAGPYGIFAGR	2	FYGPAGPYGIFAGR2	45784.1	48606.1	52973.5
P70580	P70580	PGRC1_RAT	Pgrmc1	Membrane-associated progesterone receptor component 1	1	FYGPEGPYGVFAGR	FYGPEGPYGVFAGR	2	FYGPEGPYGVFAGR2	131354	136046	154473
M0R4P9	M0R4P9	M0R4P9_RAT	Ube2h	Ubiquitin-conjugating enzyme E2H	1	FYGPQGTPYEGGVWK	FYGPQGTPYEGGVWK	2	FYGPQGTPYEGGVWK2	153216	142703	139856
M0R4P9	M0R4P9	M0R4P9_RAT	Ube2h	Ubiquitin-conjugating enzyme E2H	1	FYGPQGTPYEGGVWK	FYGPQGTPYEGGVWK	3	FYGPQGTPYEGGVWK3		8758.85	7811.87
F1M1L9	F1M1L9	F1M1L9_RAT	Cpne2	Copine 2	1	FYGPTNFSPIVNHVAR	FYGPTNFSPIVNHVAR	3	FYGPTNFSPIVNHVAR3	3804.46	7402.69	6530.72
Q9R1J8	Q9R1J8	P3H1_RAT	P3h1	Prolyl 3-hydroxylase 1	1	FYGVTVLK	FYGVTVLK	2	FYGVTVLK2	16528.6	19286	12041.5
A0JPJ7	A0JPJ7	OLA1_RAT	Ola1	Obg-like ATPase 1	1	FYHDWNDKEIEVLNK	FYHDWNDKEIEVLNK	4	FYHDWNDKEIEVLNK4	3324.97	3756.18	6346.22
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	FYHELVGLAK	FYHELVGLAK	2	FYHELVGLAK2	67152.6	83824.3	63247.9
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	FYHELVGLAK	FYHELVGLAK	3	FYHELVGLAK3	720792	890958	872071
A0A0G2K0I6	A0A0G2K0I6	A0A0G2K0I6_RAT	Cdh5	Cadherin 5	1	FYHFHLPENK	FYHFHLPENK	3	FYHFHLPENK3	38140.9	31782.6	32345.2
Q9ET64	Q9ET64	NSMA_RAT	Smpd2	Sphingomyelin phosphodiesterase 2	1	FYHGDWFCGK	FYHGDWFC(UniMod:4)GK	3	FYHGDWFC(UniMod:4)GK3	7243.12		5583.84
P01026	P01026	CO3_RAT	C3	Complement C3	1	FYHPEKDDGMLSK	FYHPEKDDGMLSK	2	FYHPEKDDGMLSK2	128237	115239	137072
P01026	P01026	CO3_RAT	C3	Complement C3	1	FYHPEKDDGMLSK	FYHPEKDDGMLSK	3	FYHPEKDDGMLSK3	1.2284e+06	1.02908e+06	930429
P01026	P01026	CO3_RAT	C3	Complement C3	1	FYHPEKDDGMLSK	FYHPEKDDGMLSK	4	FYHPEKDDGMLSK4	1.12529e+06	1.07089e+06	992496
Q62867	Q62867	GGH_RAT	Ggh	Gamma-glutamyl hydrolase	1	FYIAASYVK	FYIAASYVK	2	FYIAASYVK2	11074.8	16313.6	15652.4
Q5U2X7	Q5U2X7	TIM21_RAT	Timm21	Mitochondrial import inner membrane translocase subunit Tim21	1	FYIEGSEPGK	FYIEGSEPGK	2	FYIEGSEPGK2	11032	11785.6	9614.97
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	FYIGEMVLAIDSIHQLHYVHR	FYIGEMVLAIDSIHQLHYVHR	4	FYIGEMVLAIDSIHQLHYVHR4	3082.04	6162.09	3371.27
D4A3V2	D4A3V2	D4A3V2_RAT	Ndufa6	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6	1	FYIGHDP	FYIGHDP	1	FYIGHDP1	1597.4	1534.66	
D4A3V2	D4A3V2	D4A3V2_RAT	Ndufa6	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6	1	FYIGHDP	FYIGHDP	2	FYIGHDP2	57131	39738.7	54571.6
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	FYIQGGDWGSLICTNMAQMVPNHVK	FYIQGGDWGSLIC(UniMod:4)TNMAQMVPNHVK	3	FYIQGGDWGSLIC(UniMod:4)TNMAQMVPNHVK3	6839.7	3696.16	
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	FYLDGSTLVLK	FYLDGSTLVLK	2	FYLDGSTLVLK2	6522.33	9608.84	5703.17
P24155	P24155	THOP1_RAT	Thop1	Thimet oligopeptidase	1	FYLDLYPR	FYLDLYPR	2	FYLDLYPR2	15447.8	20853.8	11037.2
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	FYLELHSSCLESFVK	FYLELHSSC(UniMod:4)LESFVK	3	FYLELHSSC(UniMod:4)LESFVK3	12563.7	13757.9	18074.9
B2RYS2	A0A8I6A496;B2RYS2	B2RYS2_RAT	Uqcrb	Cytochrome b-c1 complex subunit 7	0	FYLEPYLK	FYLEPYLK	2	FYLEPYLK2	345338	334230	375909
Q6AXV4	Q6AXV4	SAM50_RAT	Samm50	Sorting and assembly machinery component 50 homolog	1	FYLGGPTSVR	FYLGGPTSVR	2	FYLGGPTSVR2	235916	177095	192009
D3ZX21	D3ZX21	D3ZX21_RAT	Ap4e1	AP-4 complex subunit epsilon	1	FYLIAPNQVQHIHTK	FYLIAPNQVQHIHTK	4	FYLIAPNQVQHIHTK4	1976.61	6917.1	
Q64380	Q64380	SARDH_RAT	Sardh	Sarcosine dehydrogenase, mitochondrial	1	FYLLGADAR	FYLLGADAR	2	FYLLGADAR2		6664.09	6578.39
A0A8I5ZU78	A0A8I5ZU78	A0A8I5ZU78_RAT	Lars2	leucine--tRNA ligase	1	FYLLSMFPYPSGK	FYLLSMFPYPSGK	2	FYLLSMFPYPSGK2			3630.88
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	FYLPYIFPNLCK	FYLPYIFPNLC(UniMod:4)K	2	FYLPYIFPNLC(UniMod:4)K2	4119.85	7922.75	5825.62
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	FYLSNGKPQAVR	FYLSNGKPQAVR	3	FYLSNGKPQAVR3	13174.4	18112.7	14803.7
B2RYI0	B2RYI0	WDR91_RAT	Wdr91	WD repeat-containing protein 91	1	FYLVYTIQTNR	FYLVYTIQTNR	2	FYLVYTIQTNR2	3453.85	2672.96	
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	FYMEEPPGTQK	FYMEEPPGTQK	2	FYMEEPPGTQK2	17401.4	14579.4	11452.3
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	FYMVSYYER	FYMVSYYER	2	FYMVSYYER2	15682.3	3852.07	4582.46
F7FH41	F7FH41	F7FH41_RAT	Csnk2a2	Casein kinase 2 alpha 2	1	FYMYELLK	FYMYELLK	2	FYMYELLK2	63857.5	67615.1	61418.1
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	FYNDPAGYAMNR	FYNDPAGYAMNR	2	FYNDPAGYAMNR2	9930.95	8592.13	7112.8
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	FYNELTEILVR	FYNELTEILVR	2	FYNELTEILVR2	43939.6	38943.5	42084
D4ACK7	Q5U2P1;D4ACK7	D4ACK7_RAT	Cnnm3	Metal transporter	0	FYNHPLHFVFNDTK	FYNHPLHFVFNDTK	4	FYNHPLHFVFNDTK4	3512.5		
A0A8I6AGS4	A0A8I6AGS4	A0A8I6AGS4_RAT	Abi3bp	ABI family member 3 binding protein	1	FYNIGDQR	FYNIGDQR	2	FYNIGDQR2	21728.6	36103.6	30152.8
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	FYNMMTK	FYNMMTK	2	FYNMMTK2	28421.6	33740.2	29718.5
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	FYNQVSTPLLR	FYNQVSTPLLR	2	FYNQVSTPLLR2	211524	273994	251168
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	FYNQVSTPLLR	FYNQVSTPLLR	3	FYNQVSTPLLR3	1.59007e+06	1.7331e+06	1.57872e+06
Q6AYF8	Q6AYF8;M0R455	Q6AYF8_RAT	Serpinb9	Serpin family B member 9	0	FYNSEMEQLSFAEAAEESRK	FYNSEMEQLSFAEAAEESRK	3	FYNSEMEQLSFAEAAEESRK3	24804.1	34637.2	19871.3
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	FYPDKIDYFSLDPLNIK	FYPDKIDYFSLDPLNIK	3	FYPDKIDYFSLDPLNIK3	16299.9	9925.44	10594.9
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	FYPDRPHQK	FYPDRPHQK	3	FYPDRPHQK3	72166.7	58173.3	
O35763	O35763	MOES_RAT	Msn	Moesin	1	FYPEDVSEELIQDITQR	FYPEDVSEELIQDITQR	3	FYPEDVSEELIQDITQR3	101474	74728	101887
D3Z7Z5	D3Z7Z5	D3Z7Z5_RAT	Ranbp10	RAN binding protein 10	1	FYPGLLEHSPNLLFMLK	FYPGLLEHSPNLLFMLK	3	FYPGLLEHSPNLLFMLK3	2512.18		3497
Q5XIM0	Q5XIM0	Q5XIM0_RAT	Bcs1l	Mitochondrial chaperone BCS1	1	FYPGQAPSLAENFAEHVLK	FYPGQAPSLAENFAEHVLK	3	FYPGQAPSLAENFAEHVLK3	19662.2		19836.7
Q3MHS7	Q3MHS7	Q3MHS7_RAT	Gmds	GDP-mannose 4,6-dehydratase	1	FYQASTSELYGK	FYQASTSELYGK	2	FYQASTSELYGK2	22132.7	18332	21168.1
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	FYQHKFPEVEDVVMVNVR	FYQHKFPEVEDVVMVNVR	3	FYQHKFPEVEDVVMVNVR3	3214.36	4601.64	6438.22
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	FYQHKFPEVEDVVMVNVR	FYQHKFPEVEDVVMVNVR	4	FYQHKFPEVEDVVMVNVR4	19062.1	30852.7	26606
P15384	P15384	KCNA3_RAT	Kcna3	Potassium voltage-gated channel subfamily A member 3	1	FYQLGEEAMEK	FYQLGEEAMEK	2	FYQLGEEAMEK2	155893	142142	162422
D3ZTA9	D3ZTA9;D3ZFR1	D3ZTA9_RAT	Hs3st3b1	Sulfotransferase	0	FYQMTGR	FYQMTGR	2	FYQMTGR2	12905.2	6127.84	12462.2
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	FYQVTIR	FYQVTIR	2	FYQVTIR2	23351.5	20368.5	16631.3
P03994	P03994	HPLN1_RAT	Hapln1	Hyaluronan and proteoglycan link protein 1	1	FYRDPTAFGSGIHK	FYRDPTAFGSGIHK	4	FYRDPTAFGSGIHK4	4757.5	6584.19	3523.27
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	FYSDNSVQR	FYSDNSVQR	2	FYSDNSVQR2	45326.3	40686.2	47718.8
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	FYSEKECK	FYSEKEC(UniMod:4)K	2	FYSEKEC(UniMod:4)K2	1.03581e+06		1.72937e+06
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	FYSEKECKEYCGVPGDGYEELTR	FYSEKEC(UniMod:4)KEYC(UniMod:4)GVPGDGYEELTR	3	FYSEKEC(UniMod:4)KEYC(UniMod:4)GVPGDGYEELTR3	7906.6	7654.29	
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	FYSEKECKEYCGVPGDGYEELTR	FYSEKEC(UniMod:4)KEYC(UniMod:4)GVPGDGYEELTR	4	FYSEKEC(UniMod:4)KEYC(UniMod:4)GVPGDGYEELTR4	26448.5	34934.6	30341.8
Q6TUD3	Q6TUD3	Q6TUD3_RAT	Rdh11	LRRGT00111	1	FYSGGLAYCHSK	FYSGGLAYC(UniMod:4)HSK	2	FYSGGLAYC(UniMod:4)HSK2	8104.49	17781.4	13704.4
Q6TUD3	Q6TUD3	Q6TUD3_RAT	Rdh11	LRRGT00111	1	FYSGGLAYCHSK	FYSGGLAYC(UniMod:4)HSK	3	FYSGGLAYC(UniMod:4)HSK3	72032.4	79570.2	77447.8
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	FYSLHHITADVGR	FYSLHHITADVGR	3	FYSLHHITADVGR3	9745.92	9950.96	10769.7
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	FYSLLDR	FYSLLDR	2	FYSLLDR2	157516	132751	176743
B2RYD7	B2RYD7	B2RYD7_RAT	Stt3b	dolichyl-diphosphooligosaccharide--protein glycotransferase	1	FYSLWDTGYAK	FYSLWDTGYAK	2	FYSLWDTGYAK2	37652	33035.9	
A0A8I6A8Q1	A0A8I6A8Q1	A0A8I6A8Q1_RAT	A2ml1	Alpha-2-macroglobulin-like 1	1	FYSQTSSFMK	FYSQTSSFMK	2	FYSQTSSFMK2	24988.8	22203.5	17039
B2RZD6	B2RZD6	B2RZD6_RAT	Ndufa4	NDUFA4, mitochondrial complex associated	1	FYSVNVDYSK	FYSVNVDYSK	2	FYSVNVDYSK2	594970	528708	568967
A0A8I6A9E8	A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	1	FYTACVVEAFAYLHSK	FYTAC(UniMod:4)VVEAFAYLHSK	3	FYTAC(UniMod:4)VVEAFAYLHSK3	3352.63	2297.17	1967.4
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	FYTAEVVLALDAIHSMGLIHR	FYTAEVVLALDAIHSMGLIHR	4	FYTAEVVLALDAIHSMGLIHR4	29978.7	39396.6	39562.5
B2GV06	B2GV06	SCOT1_RAT	Oxct1	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial	1	FYTDPVEAVK	FYTDPVEAVK	2	FYTDPVEAVK2	166006	144311	152071
P04762	P04762	CATA_RAT	Cat	Catalase	1	FYTEDGNWDLVGNNTPIFFIR	FYTEDGNWDLVGNNTPIFFIR	3	FYTEDGNWDLVGNNTPIFFIR3		2456.58	
B2RZD1	B2RZD1	B2RZD1_RAT	Sec61b	Protein transport protein Sec61 subunit beta	1	FYTEDSPGLK	FYTEDSPGLK	2	FYTEDSPGLK2	91814	83883.1	94030.8
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	FYTGTGFK	FYTGTGFK	2	FYTGTGFK2	79249.6	115694	101020
B1WBX5	B1WBX5	B1WBX5_RAT	Slc43a1	Solute carrier family 43 member 1	1	FYTHVTIVGQR	FYTHVTIVGQR	3	FYTHVTIVGQR3	15418.8	12063.6	11187.2
D3ZJF9	D3ZJF9	D3ZJF9_RAT	Gla	Alpha-galactosidase	1	FYTIQISSLGR	FYTIQISSLGR	2	FYTIQISSLGR2	48986.9	41421.1	41681.8
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	FYTLFGR	FYTLFGR	2	FYTLFGR2	86853.8	76173	75188
A0A0G2K089	A0A0G2K089	A0A0G2K089_RAT	Dennd4c	DENN domain containing 4C	1	FYTLLSK	FYTLLSK	2	FYTLLSK2	3421.23	5952.95	1631.93
A0A8I6A7S3	A0A8I6A7S3	A0A8I6A7S3_RAT	Atpaf2	ATP synthase mitochondrial F1 complex assembly factor 2	1	FYTMHLTTLCNTSLDNPTQR	FYTMHLTTLC(UniMod:4)NTSLDNPTQR	3	FYTMHLTTLC(UniMod:4)NTSLDNPTQR3	3312.04		5547.63
Q5FWU0	Q5FWU0;Q5BJU7	Q5FWU0_RAT	Wasf2	Wiskott-Aldrich syndrome protein family member	0	FYTNPSYFFDLWK	FYTNPSYFFDLWK	2	FYTNPSYFFDLWK2	37541.4	43006.9	38025.6
Q5FWU0	Q5FWU0;Q5BJU7	Q5FWU0_RAT	Wasf2	Wiskott-Aldrich syndrome protein family member	0	FYTNPSYFFDLWK	FYTNPSYFFDLWK	3	FYTNPSYFFDLWK3	1501.32	1059.19	
D4ADM2	D4ADM2	D4ADM2_RAT	Pan3	PAN2-PAN3 deadenylation complex subunit PAN3	1	FYTQLDAAQMR	FYTQLDAAQMR	2	FYTQLDAAQMR2	12165	12317.6	6565.09
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	FYTQQWEDYR	FYTQQWEDYR	2	FYTQQWEDYR2	41616.2	42652.5	41155.4
E9PU15	E9PU15	E9PU15_RAT	Dicer1	Endoribonuclease Dicer	1	FYVADVYTDLTPLSK	FYVADVYTDLTPLSK	2	FYVADVYTDLTPLSK2	2340.55	3662.64	2082.94
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	FYVAGLVSWGK	FYVAGLVSWGK	2	FYVAGLVSWGK2	35096.8	40681	56977.8
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	FYVAGLVSWGKK	FYVAGLVSWGKK	2	FYVAGLVSWGKK2	53012.1	49641.6	39183.1
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	FYVAGLVSWGKK	FYVAGLVSWGKK	3	FYVAGLVSWGKK3	168091	186357	183218
P20037	P20037	HA2B_RAT	RT1-Ba	Rano class II histocompatibility antigen, B alpha chain	1	FYVDLDK	FYVDLDK	2	FYVDLDK2	25560.7	15136.2	20228.9
Q5XI83	Q5XI83	VP35L_RAT	Vps35l	VPS35 endosomal protein-sorting factor-like	1	FYVEASILK	FYVEASILK	2	FYVEASILK2	16726.8	10045.6	5813.51
D3ZYS7	D3ZYS7	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	1	FYVHNDIFR	FYVHNDIFR	2	FYVHNDIFR2	25694.7	24359.6	22106.4
D3ZYS7	D3ZYS7	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	1	FYVHNDIFR	FYVHNDIFR	3	FYVHNDIFR3	64737.8	54382.3	56953
F7F5P9	F7F5P9	F7F5P9_RAT	G3bp2	G3BP stress granule assembly factor 2	1	FYVHNDMFR	FYVHNDMFR	2	FYVHNDMFR2	9595.28	9173.9	5538.8
F7F5P9	F7F5P9	F7F5P9_RAT	G3bp2	G3BP stress granule assembly factor 2	1	FYVHNDMFR	FYVHNDMFR	3	FYVHNDMFR3	61316.7	66093	64503.3
Q6AYC2	Q6AYC2	IRGM_RAT	Irgm	Immunity-related GTPase family M protein	1	FYVIWTK	FYVIWTK	2	FYVIWTK2	3687.55	4534.12	6446.3
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	FYVNDGGQVFTLER	FYVNDGGQVFTLER	2	FYVNDGGQVFTLER2	31025.9	28895.7	36418.8
A0A0G2JV24	A0A8I6G4F0;D4A2G6;A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	0	FYVVMWK	FYVVMWK	1	FYVVMWK1	24994.6	31979.6	26079.7
A0A0G2JV24	A0A8I6G4F0;D4A2G6;A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	0	FYVVMWK	FYVVMWK	2	FYVVMWK2	1.28232e+06	1.41127e+06	1.34066e+06
A0A8I5ZSB0	A0A8I5ZSB0	A0A8I5ZSB0_RAT	Igtp	Interferon gamma induced GTPase	1	FYVVWTK	FYVVWTK	2	FYVVWTK2	12007.7	11807.7	13292.8
D3ZXK7	D3ZXK7	RN123_RAT	Rnf123	E3 ubiquitin-protein ligase RNF123	1	FYWDEYK	FYWDEYK	2	FYWDEYK2	7011.11	5717.77	7202.69
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	FYYIAAEEISWDYSK	FYYIAAEEISWDYSK	2	FYYIAAEEISWDYSK2	389391	289455	355609
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	FYYIAAEEISWDYSK	FYYIAAEEISWDYSK	3	FYYIAAEEISWDYSK3	61291.9	35509.6	53876.2
D4A6E6	D4A6E6	D4A6E6_RAT	Hs6st1	Heparan-sulfate 6-O-sulfotransferase	1	FYYITLLR	FYYITLLR	2	FYYITLLR2	6649.16	7786.32	7687.59
D4A7F6	D4A7F6	D4A7F6_RAT	Colec10	Collectin subfamily member 10	1	FYYIVQEEK	FYYIVQEEK	2	FYYIVQEEK2	411152	440036	420862
P03994	P03994	HPLN1_RAT	Hapln1	Hyaluronan and proteoglycan link protein 1	1	FYYLIHPTK	FYYLIHPTK	3	FYYLIHPTK3	24516.4	19460.2	27641.7
D4A2W1	D4A2W1	D4A2W1_RAT	Enpp4	Ectonucleotide pyrophosphatase/phosphodiesterase 4	1	FYYQHSDR	FYYQHSDR	2	FYYQHSDR2	7681.5	8861.77	9372.03
B4F767	B4F767	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	1	FYYVDHNTR	FYYVDHNTR	2	FYYVDHNTR2	4784.51		4010.73
B4F767	B4F767	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	1	FYYVDHNTR	FYYVDHNTR	3	FYYVDHNTR3	32405.3	34675.8	41564.6
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	GAAAHPDSEEQQQR	GAAAHPDSEEQQQR	2	GAAAHPDSEEQQQR2			7631.52
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	GAAAHPDSEEQQQR	GAAAHPDSEEQQQR	3	GAAAHPDSEEQQQR3			38619
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	GAAAMQEEK	GAAAMQEEK	2	GAAAMQEEK2			11887.1
Q6IN36	Q6IN36	WIPF1_RAT	Wipf1	WAS/WASL-interacting protein family member 1	1	GAAFGAGSVR	GAAFGAGSVR	2	GAAFGAGSVR2	303511	308452	314037
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	GAAFGFNVIATR	GAAFGFNVIATR	2	GAAFGFNVIATR2	2791.64	2050.57	1073.88
P05712	Q3B7V5;P05712	RAB2A_RAT	Rab2a	Ras-related protein Rab-2A	0	GAAGALLVYDITR	GAAGALLVYDITR	2	GAAGALLVYDITR2	240073	212043	230554
P05712	Q3B7V5;P05712	RAB2A_RAT	Rab2a	Ras-related protein Rab-2A	0	GAAGALLVYDITR	GAAGALLVYDITR	3	GAAGALLVYDITR3	13848.3	12950.6	13882.3
P05712	Q3B7V5;P05712	RAB2A_RAT	Rab2a	Ras-related protein Rab-2A	0	GAAGALLVYDITRR	GAAGALLVYDITRR	3	GAAGALLVYDITRR3	25836.1	27428.9	26726.4
P51146	P51146;P05714	RAB4B_RAT	Rab4b	Ras-related protein Rab-4B	0	GAAGALLVYDITSR	GAAGALLVYDITSR	2	GAAGALLVYDITSR2	41390.1	36368.4	41386.3
P51146	P51146;P05714	RAB4B_RAT	Rab4b	Ras-related protein Rab-4B	0	GAAGALLVYDITSR	GAAGALLVYDITSR	3	GAAGALLVYDITSR3	1461.54	1571.72	2240.55
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	GAAGALMVYDITR	GAAGALMVYDITR	2	GAAGALMVYDITR2	387107	381083	375086
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	GAAGALMVYDITR	GAAGALMVYDITR	3	GAAGALMVYDITR3	3876.14	9042.2	
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	GAAGALMVYDITRR	GAAGALMVYDITRR	3	GAAGALMVYDITRR3	21715.7	23733.1	30712
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	GAAGEQLSFAAGLVYSLSLLQATLHR	GAAGEQLSFAAGLVYSLSLLQATLHR	3	GAAGEQLSFAAGLVYSLSLLQATLHR3		10695.9	8963.39
Q62733	Q62733	LAP2_RAT	Tmpo	Lamina-associated polypeptide 2, isoform beta	1	GAAGRPLELSDFR	GAAGRPLELSDFR	3	GAAGRPLELSDFR3	15216.2	17318	9354.78
E9PT20	E9PT20	E9PT20_RAT	Abl1	Tyrosine-protein kinase	1	GAAGSTLQAPELPTK	GAAGSTLQAPELPTK	2	GAAGSTLQAPELPTK2	2583.91	1916.52	2099.14
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	GAAICSYVR	GAAIC(UniMod:4)SYVR	2	GAAIC(UniMod:4)SYVR2	14854.9	10101	8006.43
P50503	P50503	F10A1_RAT	St13	Hsc70-interacting protein	1	GAAIDALNDGELQK	GAAIDALNDGELQK	2	GAAIDALNDGELQK2	307928	288156	272614
P50503	P50503	F10A1_RAT	St13	Hsc70-interacting protein	1	GAAIDALNDGELQK	GAAIDALNDGELQK	3	GAAIDALNDGELQK3		2053.99	3156.62
Q9EQH5	Q9EQH5	CTBP2_RAT	Ctbp2	C-terminal-binding protein 2	1	GAALDVHESEPFSFAQGPLK	GAALDVHESEPFSFAQGPLK	3	GAALDVHESEPFSFAQGPLK3	1189.57	9063.11	
Q9Z2F5	Q9Z2F5	CTBP1_RAT	Ctbp1	C-terminal-binding protein 1	1	GAALDVHESEPFSFSQGPLK	GAALDVHESEPFSFSQGPLK	3	GAALDVHESEPFSFSQGPLK3	17196.8	10297.1	13540.3
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	GAALGDLVPSRPPSFSPCPAEDLFPGR	GAALGDLVPSRPPSFSPC(UniMod:4)PAEDLFPGR	3	GAALGDLVPSRPPSFSPC(UniMod:4)PAEDLFPGR3	93567.2	74930.9	91424.3
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	GAALITAVGVR	GAALITAVGVR	2	GAALITAVGVR2	234414	238254	223566
D3ZXK7	D3ZXK7	RN123_RAT	Rnf123	E3 ubiquitin-protein ligase RNF123	1	GAAMSFSR	GAAMSFSR	2	GAAMSFSR2	10738.8	14082.5	14061.2
P05708	P27881;P05708	HXK1_RAT	Hk1	Hexokinase-1	0	GAAMVTAVAYR	GAAMVTAVAYR	2	GAAMVTAVAYR2	286996	266992	293610
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	GAANDSTQFTVAGR	GAANDSTQFTVAGR	2	GAANDSTQFTVAGR2	7719.01	7545.72	7078.69
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	GAANHDLTDTTR	GAANHDLTDTTR	3	GAANHDLTDTTR3		56736.2	
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	GAAQAGFLPGPAGVPR	GAAQAGFLPGPAGVPR	2	GAAQAGFLPGPAGVPR2	51393.2	60411.7	46292
P04797	F1LUV3;M0R660;A0A0G2K8S2;A0A8I5ZWK4;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	GAAQNIIPASTGAAK	GAAQNIIPASTGAAK	2	GAAQNIIPASTGAAK2	27536.5	26755.3	32324.2
P04797	F1LUV3;M0R660;A0A0G2K8S2;A0A8I5ZWK4;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	GAAQNIIPASTGAAK	GAAQNIIPASTGAAK	3	GAAQNIIPASTGAAK3	426669	425740	379938
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	GAASGVVGELAR	GAASGVVGELAR	2	GAASGVVGELAR2	112787	108608	100888
P08541	F1M3E3;P08541	UD2B2_RAT	Ugt2b	UDP-glucuronosyltransferase 2B2	0	GAAVSLNIR	GAAVSLNIR	2	GAAVSLNIR2	12561.4	12786.8	
F1LRI5	F1LRI5	F1LRI5_RAT	Gcn1	GCN1 activator of EIF2AK4	1	GAAYGLAGLVK	GAAYGLAGLVK	2	GAAYGLAGLVK2	2633.36	2111.9	2570.01
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	GACAGSEDAVK	GAC(UniMod:4)AGSEDAVK	2	GAC(UniMod:4)AGSEDAVK2	236352		77527
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	GACANHVSTMANFLK	GAC(UniMod:4)ANHVSTMANFLK	2	GAC(UniMod:4)ANHVSTMANFLK2	22810	22049	21836.5
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	GACANHVSTMANFLK	GAC(UniMod:4)ANHVSTMANFLK	3	GAC(UniMod:4)ANHVSTMANFLK3	261055	237185	295494
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	GACENLPGSFR	GAC(UniMod:4)ENLPGSFR	2	GAC(UniMod:4)ENLPGSFR2	16660.2	18533.5	20721.4
Q9QZK5	Q9QZK5	HTRA1_RAT	Htra1	Serine protease HTRA1	1	GACGQGQEDPNSLR	GAC(UniMod:4)GQGQEDPNSLR	2	GAC(UniMod:4)GQGQEDPNSLR2	14948.4	24451.8	13691
P62994	P62994	GRB2_RAT	Grb2	Growth factor receptor-bound protein 2	1	GACHGQTGMFPR	GAC(UniMod:4)HGQTGMFPR	2	GAC(UniMod:4)HGQTGMFPR2	12374.2	10106.4	12511.9
P62994	P62994	GRB2_RAT	Grb2	Growth factor receptor-bound protein 2	1	GACHGQTGMFPR	GAC(UniMod:4)HGQTGMFPR	3	GAC(UniMod:4)HGQTGMFPR3	44487.4	48950.1	37626.1
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	GACILNMLR	GAC(UniMod:4)ILNMLR	2	GAC(UniMod:4)ILNMLR2	21204.2	16436.8	20442.7
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	GACLTLTDHDR	GAC(UniMod:4)LTLTDHDR	2	GAC(UniMod:4)LTLTDHDR2	7148.89	5196.04	11563.2
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	GACLTLTDHDR	GAC(UniMod:4)LTLTDHDR	3	GAC(UniMod:4)LTLTDHDR3	18314.7	21988.8	14884.4
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	GACPGQGCCQGLR	GAC(UniMod:4)PGQGC(UniMod:4)C(UniMod:4)QGLR	2	GAC(UniMod:4)PGQGC(UniMod:4)C(UniMod:4)QGLR2	18265.1	26222.1	19267.6
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	GADAAQAK	GADAAQAK	1	GADAAQAK1	608.056		
D3ZP15	D3ZP15	D3ZP15_RAT	Rab9b	RAB9B, member RAS oncogene family	1	GADCCLLTFSVDDR	GADC(UniMod:4)C(UniMod:4)LLTFSVDDR	2	GADC(UniMod:4)C(UniMod:4)LLTFSVDDR2	10331.5	7642.8	3488.17
P09527	P09527	RAB7A_RAT	Rab7a	Ras-related protein Rab-7a	1	GADCCVLVFDVTAPNTFK	GADC(UniMod:4)C(UniMod:4)VLVFDVTAPNTFK	3	GADC(UniMod:4)C(UniMod:4)VLVFDVTAPNTFK3	79274.9	58257.2	65851.2
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	GADCTEDVDECAMANSNPCEHAGK	GADC(UniMod:4)TEDVDEC(UniMod:4)AMANSNPC(UniMod:4)EHAGK	3	GADC(UniMod:4)TEDVDEC(UniMod:4)AMANSNPC(UniMod:4)EHAGK3	8161.3	12833.1	8311.7
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	GADDDRGPWR	GADDDRGPWR	3	GADDDRGPWR3	108970	97239.6	117595
A0A0G2K0W3	A0A0G2K0W3	A0A0G2K0W3_RAT	Ttyh3	Protein tweety homolog	1	GADEDGEEETAPGPR	GADEDGEEETAPGPR	2	GADEDGEEETAPGPR2	40477	29265.7	40944.3
A0A0G2K0W3	A0A0G2K0W3	A0A0G2K0W3_RAT	Ttyh3	Protein tweety homolog	1	GADEDGEEETAPGPR	GADEDGEEETAPGPR	3	GADEDGEEETAPGPR3	5905.28	7448.23	8321.4
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	GADEVCSSGLRPVVR	GADEVC(UniMod:4)SSGLRPVVR	3	GADEVC(UniMod:4)SSGLRPVVR3	50325.6	57237.6	73420.2
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	GADGVTLGSQAER	GADGVTLGSQAER	2	GADGVTLGSQAER2	66016.4	65744.6	56853.5
Q05962	Q05962	ADT1_RAT	Slc25a4	ADP/ATP translocase 1	1	GADIMYTGTVDCWR	GADIMYTGTVDC(UniMod:4)WR	2	GADIMYTGTVDC(UniMod:4)WR2	218006	242437	235274
Q05962	Q05962	ADT1_RAT	Slc25a4	ADP/ATP translocase 1	1	GADIMYTGTVDCWR	GADIMYTGTVDC(UniMod:4)WR	3	GADIMYTGTVDC(UniMod:4)WR3	9661.73	12083.3	
Q05962	Q05962	ADT1_RAT	Slc25a4	ADP/ATP translocase 1	1	GADIMYTGTVDCWRK	GADIMYTGTVDC(UniMod:4)WRK	3	GADIMYTGTVDC(UniMod:4)WRK3	12936	15581.3	15792.6
P62775	P62775	MTPN_RAT	Mtpn	Myotrophin	1	GADINAPDK	GADINAPDK	2	GADINAPDK2	73497.9	59273.3	61756.3
P62775	P62775	MTPN_RAT	Mtpn	Myotrophin	1	GADINAPDKHHITPLLSAVYEGHVSCVK	GADINAPDKHHITPLLSAVYEGHVSC(UniMod:4)VK	4	GADINAPDKHHITPLLSAVYEGHVSC(UniMod:4)VK4	2234.73	2611.45	1445.61
B1WBV3	B1WBV3	B1WBV3_RAT	Gfod2	Glucose-fructose oxidoreductase domain containing 2	1	GADLYGQK	GADLYGQK	2	GADLYGQK2	6449.61	3510.4	7354.85
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	GADMSVPDEK	GADMSVPDEK	2	GADMSVPDEK2	102608	114471	105530
D3ZMR1	D3ZMR1	D3ZMR1_RAT	Tomm7	Mitochondrial import receptor subunit TOM7 homolog	1	GADPGMPEPSVLSLLWG	GADPGMPEPSVLSLLWG	2	GADPGMPEPSVLSLLWG2	2245.23		
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	GADQDELQK	GADQDELQK	2	GADQDELQK2	139461	157590	
Q63186	Q63186	EI2BD_RAT	Eif2b4	Translation initiation factor eIF-2B subunit delta	1	GADQEIGSAVSAAQR	GADQEIGSAVSAAQR	2	GADQEIGSAVSAAQR2	10361.9	18660.9	13269.5
Q63186	Q63186	EI2BD_RAT	Eif2b4	Translation initiation factor eIF-2B subunit delta	1	GADQEIGSAVSAAQR	GADQEIGSAVSAAQR	3	GADQEIGSAVSAAQR3	25525.8	6954.2	
D3ZYT8	D3ZYT8	D3ZYT8_RAT	Pikfyve	1-phosphatidylinositol-3-phosphate 5-kinase	1	GADSAYYQVGQTGK	GADSAYYQVGQTGK	2	GADSAYYQVGQTGK2	6021.43	2212.61	3922.26
A0A8I6GM43	A0A8I6GM43	A0A8I6GM43_RAT	Pbdc1	Polysaccharide biosynthesis domain containing 1	1	GADSGGEKEEGVNR	GADSGGEKEEGVNR	3	GADSGGEKEEGVNR3			22547.8
D4ADE8	D4ADE8;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	GADSLEDFLYHEGYACTSIHGDR	GADSLEDFLYHEGYAC(UniMod:4)TSIHGDR	3	GADSLEDFLYHEGYAC(UniMod:4)TSIHGDR3	10896.1		
D4ADE8	D4ADE8;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	GADSLEDFLYHEGYACTSIHGDR	GADSLEDFLYHEGYAC(UniMod:4)TSIHGDR	4	GADSLEDFLYHEGYAC(UniMod:4)TSIHGDR4	11000.1	10890	5632.51
A0A8I5ZTL7	A0A8I5ZTL7;A0A8I5ZV31	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	0	GADSSIFPR	GADSSIFPR	2	GADSSIFPR2	40657.6	34607	30333.5
B1WC88	B1WC88	CR032_RAT		UPF0729 protein C18orf32 homolog	1	GADTNGFSTK	GADTNGFSTK	2	GADTNGFSTK2	7447.18	6082.35	10053
Q9WV63	Q62909;Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	0	GADTSSADR	GADTSSADR	2	GADTSSADR2			10251
A0A8I5ZXX6	A0A8I5ZXX6;D4AA47	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	0	GADTVIYER	GADTVIYER	2	GADTVIYER2	92531.4	118472	102880
D3ZKE1	D3ZKE1	D3ZKE1_RAT	Uvrag	UV radiation resistance associated	1	GADVGLSTGVPSPDNVHR	GADVGLSTGVPSPDNVHR	3	GADVGLSTGVPSPDNVHR3	18978.9	15030.3	11051.4
A0A8I6AAR9	A0A0G2K916;A0A8I6AAR9	A0A8I6AAR9_RAT	Ankrd17	Ankyrin repeat domain 17	0	GADVNAPPVPSSR	GADVNAPPVPSSR	2	GADVNAPPVPSSR2	7735.12	8656.96	
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	GADYLVTEVENGGSLGSK	GADYLVTEVENGGSLGSK	2	GADYLVTEVENGGSLGSK2	70547.5	63306.9	66896
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	GADYLVTEVENGGSLGSK	GADYLVTEVENGGSLGSK	3	GADYLVTEVENGGSLGSK3	4281.77	8545.48	8829.27
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	GADYMDCLYR	GADYMDC(UniMod:4)LYR	2	GADYMDC(UniMod:4)LYR2	10505	8720.62	9662.86
D4A3P0	D4A3P0	D4A3P0_RAT	Ybx2	Y box binding protein 2	1	GAEAANVTGPGGVPVK	GAEAANVTGPGGVPVK	2	GAEAANVTGPGGVPVK2	3995.83	2213.25	
P62961	A0A8I5ZRA5;A0A8I6GL75;P62961;D3ZEV0;A0A8I6ABQ3	YBOX1_RAT	Ybx1	Y-box-binding protein 1	0	GAEAANVTGPGGVPVQGSK	GAEAANVTGPGGVPVQGSK	2	GAEAANVTGPGGVPVQGSK2	28124.4	27888.8	19120
A0A8I6A263	A0A8I6A263	A0A8I6A263_RAT	Aimp1	Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	1	GAEADQIIEYLK	GAEADQIIEYLK	2	GAEADQIIEYLK2	49297.8	56861.7	49253
O88767	O88767	PARK7_RAT	Park7	Parkinson disease protein 7 homolog	1	GAEEMETVIPVDIMR	GAEEMETVIPVDIMR	2	GAEEMETVIPVDIMR2	34457.4	24821.4	31911.4
O88767	O88767	PARK7_RAT	Park7	Parkinson disease protein 7 homolog	1	GAEEMETVIPVDIMR	GAEEMETVIPVDIMR	3	GAEEMETVIPVDIMR3	7850.66	14552.3	
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	GAEEMLPEEPLK	GAEEMLPEEPLK	2	GAEEMLPEEPLK2	19806.7	19869.8	21968.9
Q501R9	Q501R9	NBR1_RAT	Nbr1	Next to BRCA1 gene 1 protein	1	GAEGEPGIESGQEPAEAR	GAEGEPGIESGQEPAEAR	2	GAEGEPGIESGQEPAEAR2		3539.52	
D3ZWS6	D3ZWS6	D3ZWS6_RAT	Naa30	N(alpha)-acetyltransferase 30, NatC catalytic subunit	1	GAEGHPGERPPHSVPNNAR	GAEGHPGERPPHSVPNNAR	3	GAEGHPGERPPHSVPNNAR3			5085.83
D3ZWS6	D3ZWS6	D3ZWS6_RAT	Naa30	N(alpha)-acetyltransferase 30, NatC catalytic subunit	1	GAEGHPGERPPHSVPNNAR	GAEGHPGERPPHSVPNNAR	4	GAEGHPGERPPHSVPNNAR4			17515.3
D4A529	D4A529	D4A529_RAT	She	Src homology 2 domain containing E	1	GAEHMTLLHPVHK	GAEHMTLLHPVHK	3	GAEHMTLLHPVHK3	6431.57	6270.02	5658
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	GAEILEVLHSLPAVR	GAEILEVLHSLPAVR	2	GAEILEVLHSLPAVR2	59058.6	53509.6	50941.4
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	GAEILEVLHSLPAVR	GAEILEVLHSLPAVR	3	GAEILEVLHSLPAVR3	345442	181960	135856
B2RZD7	B2RZD7	LYRM9_RAT	Lyrm9	LYR motif-containing protein 9	1	GAELVQTPLQLYR	GAELVQTPLQLYR	2	GAELVQTPLQLYR2	8907.98	13234.7	14075.1
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	GAENFDK	GAENFDK	2	GAENFDK2		228294	
A0A8I6GH02	A0A8I6GH02	A0A8I6GH02_RAT	Cntnap2	Contactin associated protein 2	1	GAESAESADAAIMNNDPNFTETIDESK	GAESAESADAAIMNNDPNFTETIDESK	3	GAESAESADAAIMNNDPNFTETIDESK3	10476.4	8760.18	6041.84
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	GAESVTEEK	GAESVTEEK	2	GAESVTEEK2	28253.6		20035.6
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	GAETDLLR	GAETDLLR	2	GAETDLLR2	157964	151601	163011
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	GAEVLYSLALAHAR	GAEVLYSLALAHAR	3	GAEVLYSLALAHAR3	19748.2	25985	20215.8
P58751	P58751	RELN_RAT	Reln	Reelin	1	GAEVSFGCGVLASGK	GAEVSFGC(UniMod:4)GVLASGK	2	GAEVSFGC(UniMod:4)GVLASGK2	93000.2	98362.6	100107
Q64620	Q64620	PPP6_RAT	Ppp6c	Serine/threonine-protein phosphatase 6 catalytic subunit	1	GAFCDLVWSDPEDVDTWAISPR	GAFC(UniMod:4)DLVWSDPEDVDTWAISPR	3	GAFC(UniMod:4)DLVWSDPEDVDTWAISPR3		43254.1	102091
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	GAFCEVRPDDK	GAFC(UniMod:4)EVRPDDK	3	GAFC(UniMod:4)EVRPDDK3	18359.3	12905.4	18376
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	GAFCEVRPDDKR	GAFC(UniMod:4)EVRPDDKR	3	GAFC(UniMod:4)EVRPDDKR3	31060.7	16272	30373.7
P97697	P97697	IMPA1_RAT	Impa1	Inositol monophosphatase 1	1	GAFCNGQK	GAFC(UniMod:4)NGQK	2	GAFC(UniMod:4)NGQK2	7047.9		7898.61
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	GAFDDMKELER	GAFDDMKELER	3	GAFDDMKELER3	10528.6	15560.2	17325.3
D3ZEJ9	D3ZEJ9	D3ZEJ9_RAT	RGD1310429	Similar to Protein Njmu-R1	1	GAFFEGLGNVASVELR	GAFFEGLGNVASVELR	2	GAFFEGLGNVASVELR2	23202.6	6024.78	19808.3
E9PSP1	E9PSP1	E9PSP1_RAT	Pltp	Phospholipid transfer protein	1	GAFFPLK	GAFFPLK	2	GAFFPLK2	822683	791635	780238
O08774	O08774	RGS12_RAT	Rgs12	Regulator of G-protein signaling 12	1	GAFFSWSR	GAFFSWSR	2	GAFFSWSR2	11359.8	10390.3	8152.28
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	GAFGEATLYR	GAFGEATLYR	2	GAFGEATLYR2	56021.2	56063.8	49001.4
Q7TT49	Q7TT49;O54874	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	0	GAFGEVAVVK	GAFGEVAVVK	2	GAFGEVAVVK2	131113	145821	121110
Q62868	Q62868;Q63644	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	0	GAFGEVQLVR	GAFGEVQLVR	2	GAFGEVQLVR2	62928.6	87520.2	87242
P0C8E4	P0C8E4	M3K7_RAT	Map3k7	Mitogen-activated protein kinase kinase kinase 7	1	GAFGVVCK	GAFGVVC(UniMod:4)K	2	GAFGVVC(UniMod:4)K2	32020.4	34395.2	38289.5
P08290	P08290	ASGR2_RAT	Asgr2	Asialoglycoprotein receptor 2	1	GAFHIWIGLTDK	GAFHIWIGLTDK	3	GAFHIWIGLTDK3	16628.2	20716.6	17714.2
P08290	P08290	ASGR2_RAT	Asgr2	Asialoglycoprotein receptor 2	1	GAFHIWIGLTDKDGSWK	GAFHIWIGLTDKDGSWK	3	GAFHIWIGLTDKDGSWK3	5053.06	2677.58	
P08290	P08290	ASGR2_RAT	Asgr2	Asialoglycoprotein receptor 2	1	GAFHIWIGLTDKDGSWK	GAFHIWIGLTDKDGSWK	4	GAFHIWIGLTDKDGSWK4	8827.48	20077.3	18983.6
G3V9N7	G3V9N7	G3V9N7_RAT	Pacsin3	Protein kinase C and casein kinase substrate in neurons 3	1	GAFHRPVLGGFR	GAFHRPVLGGFR	3	GAFHRPVLGGFR3	33777.8	15759.9	
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	GAFNFDQETVINPETGEQIQSWYR	GAFNFDQETVINPETGEQIQSWYR	3	GAFNFDQETVINPETGEQIQSWYR3		4168.39	9534.1
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	GAFPVSFVHFIAD	GAFPVSFVHFIAD	2	GAFPVSFVHFIAD2	21648.2	24150.2	31893.2
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	GAFQTGQGPLDAQVK	GAFQTGQGPLDAQVK	2	GAFQTGQGPLDAQVK2	12987	16743.9	5519.19
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	GAFTDNER	GAFTDNER	2	GAFTDNER2	27766.5	29785.5	36826
Q5RK27	Q5RK27	S12A7_RAT	Slc12a7	Solute carrier family 12 member 7	1	GAFVEKK	GAFVEKK	1	GAFVEKK1	865.37		
D3ZAH3	D3ZAH3	D3ZAH3_RAT	Nedd1	NEDD1 gamma-tubulin ring complex targeting factor	1	GAGAAQDEAGLPR	GAGAAQDEAGLPR	2	GAGAAQDEAGLPR2	2662.44	2854.34	
P04762	P04762	CATA_RAT	Cat	Catalase	1	GAGAFGYFEVTHDITR	GAGAFGYFEVTHDITR	3	GAGAFGYFEVTHDITR3	25042.4	21660.5	21381.9
D3ZM09	D3ZM09	D3ZM09_RAT	Sars2	serine--tRNA ligase	1	GAGALLQHGLVNFTLSK	GAGALLQHGLVNFTLSK	3	GAGALLQHGLVNFTLSK3			4082.37
A0A0G2K652	A0A0G2K652	A0A0G2K652_RAT	Cul9	Cullin 9	1	GAGATALGTACPSWDR	GAGATALGTAC(UniMod:4)PSWDR	2	GAGATALGTAC(UniMod:4)PSWDR2	1569.77		3351.72
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	GAGAYICGEETALIESIEGK	GAGAYIC(UniMod:4)GEETALIESIEGK	3	GAGAYIC(UniMod:4)GEETALIESIEGK3	6696.15	4030.29	11989.6
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	GAGDAMENGKPGPVQVVLVHK	GAGDAMENGKPGPVQVVLVHK	3	GAGDAMENGKPGPVQVVLVHK3		3173.56	12167.3
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	GAGDAMENGKPGPVQVVLVHK	GAGDAMENGKPGPVQVVLVHK	4	GAGDAMENGKPGPVQVVLVHK4	20144	14416.3	26368
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	GAGDMLCR	GAGDMLC(UniMod:4)R	2	GAGDMLC(UniMod:4)R2	30181.6	29152.7	28956.8
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	GAGGGAGGGSDDSYYEDVGDDCVVK	GAGGGAGGGSDDSYYEDVGDDC(UniMod:4)VVK	3	GAGGGAGGGSDDSYYEDVGDDC(UniMod:4)VVK3	21400.9	15266.5	26309.7
Q5FWS5	Q5FWS5	Q5FWS5_RAT	Loxl1	Lysyl oxidase homolog	1	GAGGGMGAGAAAAAVASAGVIYPFQPR	GAGGGMGAGAAAAAVASAGVIYPFQPR	3	GAGGGMGAGAAAAAVASAGVIYPFQPR3	17392.7	18389.9	20701.8
D4AD36	D4AD36	D4AD36_RAT	Fchsd1	FCH and double SH3 domains 1	1	GAGGMAEESGLER	GAGGMAEESGLER	2	GAGGMAEESGLER2	3892.65	2104.71	2941.42
A0A8I6ARV9	A0A8I6ARV9	A0A8I6ARV9_RAT	Ctsa	Carboxypeptidase	1	GAGHMVPTDKPR	GAGHMVPTDKPR	2	GAGHMVPTDKPR2	23332.7	19143.8	16133.2
A0A8I6ARV9	A0A8I6ARV9	A0A8I6ARV9_RAT	Ctsa	Carboxypeptidase	1	GAGHMVPTDKPR	GAGHMVPTDKPR	3	GAGHMVPTDKPR3	39546.7	45318.3	39152.8
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	GAGIGGLGITVEGPSESK	GAGIGGLGITVEGPSESK	2	GAGIGGLGITVEGPSESK2	8095.59	6901.31	3789.27
Q711G3	Q711G3	IAH1_RAT	Iah1	Isoamyl acetate-hydrolyzing esterase 1 homolog	1	GAGLENPVAVTIFFGANDSTLKDENPK	GAGLENPVAVTIFFGANDSTLKDENPK	3	GAGLENPVAVTIFFGANDSTLKDENPK3	4052.6		
Q5XI97	Q5XI97	AASD1_RAT	Aarsd1	Alanyl-tRNA editing protein Aarsd1	1	GAGLFLLAGPTEAVETLGPR	GAGLFLLAGPTEAVETLGPR	3	GAGLFLLAGPTEAVETLGPR3	6103.96	2694.17	3202.49
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	GAGLFVGQAGAADPDK	GAGLFVGQAGAADPDK	2	GAGLFVGQAGAADPDK2	10294.5	7687.91	11912.7
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	GAGLFVGQAGAADPDKFQGMISELR	GAGLFVGQAGAADPDKFQGMISELR	3	GAGLFVGQAGAADPDKFQGMISELR3	50049.5	66117.5	68159
F7ETN7	F7ETN7	F7ETN7_RAT	B4galt7	Beta-1,4-galactosyltransferase	1	GAGLQLFRPLGITTGYQTFR	GAGLQLFRPLGITTGYQTFR	3	GAGLQLFRPLGITTGYQTFR3	10036.7		5426.32
P17105	P17105	IP3KA_RAT	Itpka	Inositol-trisphosphate 3-kinase A	1	GAGPCSPGLER	GAGPC(UniMod:4)SPGLER	2	GAGPC(UniMod:4)SPGLER2	11788.8	360.378	5819.8
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	GAGPESEPYIFQTPEGVPEQPSFLK	GAGPESEPYIFQTPEGVPEQPSFLK	3	GAGPESEPYIFQTPEGVPEQPSFLK3	16352.3	12705	12408.2
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	GAGPGCYLAGSLTLSK	GAGPGC(UniMod:4)YLAGSLTLSK	2	GAGPGC(UniMod:4)YLAGSLTLSK2	27632.7	32852.3	35355.6
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	GAGPLSPSIQSR	GAGPLSPSIQSR	2	GAGPLSPSIQSR2	57020.9	49334.6	41421.6
Q5HZV9	Q5HZV9	PP1R7_RAT	Ppp1r7	Protein phosphatase 1 regulatory subunit 7	1	GAGQQQSQEMMEVDR	GAGQQQSQEMMEVDR	2	GAGQQQSQEMMEVDR2	27363	24653.4	35284.8
Q5HZV9	Q5HZV9	PP1R7_RAT	Ppp1r7	Protein phosphatase 1 regulatory subunit 7	1	GAGQQQSQEMMEVDR	GAGQQQSQEMMEVDR	3	GAGQQQSQEMMEVDR3	7779.68	7935.64	9565.92
Q5HZV9	Q5HZV9	PP1R7_RAT	Ppp1r7	Protein phosphatase 1 regulatory subunit 7	1	GAGQQQSQEMMEVDRR	GAGQQQSQEMMEVDRR	3	GAGQQQSQEMMEVDRR3	15227.1	20392.4	25488
D3ZHA0	D3ZHA0;A0A8I5ZV49	FLNC_RAT	Flnc	Filamin-C	0	GAGSGELK	GAGSGELK	1	GAGSGELK1			3448.96
Q6IRJ7	Q6IRJ7	Q6IRJ7_RAT	Anxa7	Annexin	1	GAGTDDSTLVR	GAGTDDSTLVR	2	GAGTDDSTLVR2	42588.4	39511.3	41777.4
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	GAGTDEACLIEILASR	GAGTDEAC(UniMod:4)LIEILASR	2	GAGTDEAC(UniMod:4)LIEILASR2	25095.7	28909.5	42571.6
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	GAGTDEACLIEILASR	GAGTDEAC(UniMod:4)LIEILASR	3	GAGTDEAC(UniMod:4)LIEILASR3	42392	46220.2	50454.8
P55260	P55260	ANXA4_RAT	Anxa4	Annexin A4	1	GAGTDEGCLIEILASR	GAGTDEGC(UniMod:4)LIEILASR	2	GAGTDEGC(UniMod:4)LIEILASR2			2051.01
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	GAGTGGLGLAVEGPSEAK	GAGTGGLGLAVEGPSEAK	2	GAGTGGLGLAVEGPSEAK2	216757	212290	166106
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	GAGTGGLGLAVEGPSEAK	GAGTGGLGLAVEGPSEAK	3	GAGTGGLGLAVEGPSEAK3	116902	108999	132086
D3ZHA0	D3ZHA0;A0A0G2JXT8	FLNC_RAT	Flnc	Filamin-C	0	GAGTGGLGLTVEGPCEAK	GAGTGGLGLTVEGPC(UniMod:4)EAK	2	GAGTGGLGLTVEGPC(UniMod:4)EAK2	3868.25	2481.1	5540.34
Q5PQP8	Q5PQP8	Q5PQP8_RAT	Cuedc1	CUE domain containing 1	1	GAGTGTGDGSAAPQELNNSRPAR	GAGTGTGDGSAAPQELNNSRPAR	3	GAGTGTGDGSAAPQELNNSRPAR3		4554.79	3768.33
Q64620	Q64620	PPP6_RAT	Ppp6c	Serine/threonine-protein phosphatase 6 catalytic subunit	1	GAGWLFGAK	GAGWLFGAK	2	GAGWLFGAK2	338283	358176	374217
P62716	A0A0G2JYA4;P63331;P62716	PP2AB_RAT	Ppp2cb	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	0	GAGYTFGQDISETFNHANGLTLVSR	GAGYTFGQDISETFNHANGLTLVSR	3	GAGYTFGQDISETFNHANGLTLVSR3	128974	122467	97870.8
Q6NYB7	Q6NYB7	RAB1A_RAT	Rab1A	Ras-related protein Rab-1A	1	GAHGIIVVYDVTDQESFNNVK	GAHGIIVVYDVTDQESFNNVK	3	GAHGIIVVYDVTDQESFNNVK3	138066	147083	146194
P10536	P10536	RAB1B_RAT	Rab1b	Ras-related protein Rab-1B	1	GAHGIIVVYDVTDQESYANVK	GAHGIIVVYDVTDQESYANVK	3	GAHGIIVVYDVTDQESYANVK3	277133	242671	289179
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	GAHLVSAGELK	GAHLVSAGELK	2	GAHLVSAGELK2	15531.8	8442.93	9934.92
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	GAHLVSAGELKR	GAHLVSAGELKR	3	GAHLVSAGELKR3	15474.7	20362.2	11783.8
P38983	A0A8I5ZZE2;P38983	RSSA_RAT	Rpsa	Small ribosomal subunit protein uS2	0	GAHSVGLMWWMLAR	GAHSVGLMWWMLAR	2	GAHSVGLMWWMLAR2	13633.1	7933.21	
P38983	A0A8I5ZZE2;P38983	RSSA_RAT	Rpsa	Small ribosomal subunit protein uS2	0	GAHSVGLMWWMLAR	GAHSVGLMWWMLAR	3	GAHSVGLMWWMLAR3	40822.2	38569.6	31166.8
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	GAHVTINAR	GAHVTINAR	2	GAHVTINAR2	148258	135359	92363.4
A0A8I5ZYD8	A0A8I5ZYD8	A0A8I5ZYD8_RAT	Fhl3	Four and a half LIM domains 3	1	GAHYCVPCYENK	GAHYC(UniMod:4)VPC(UniMod:4)YENK	2	GAHYC(UniMod:4)VPC(UniMod:4)YENK2	49678.9	66633.8	67079.1
A0A8I5ZYD8	A0A8I5ZYD8	A0A8I5ZYD8_RAT	Fhl3	Four and a half LIM domains 3	1	GAHYCVPCYENK	GAHYC(UniMod:4)VPC(UniMod:4)YENK	3	GAHYC(UniMod:4)VPC(UniMod:4)YENK3	384055	384649	420510
D4A7H1	D4A7H1	SL9A9_RAT	Slc9a9	Sodium/hydrogen exchanger 9	1	GAIAFALAIR	GAIAFALAIR	2	GAIAFALAIR2	11814.7	8559.41	
Q5M818	Q5M818	RM16_RAT	Mrpl16	Large ribosomal subunit protein uL16m	1	GAIDHYVTPVK	GAIDHYVTPVK	3	GAIDHYVTPVK3	4842.07		4184.6
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	GAIFCPSCYDVR	GAIFC(UniMod:4)PSC(UniMod:4)YDVR	2	GAIFC(UniMod:4)PSC(UniMod:4)YDVR2	321695	293282	284050
A0A0G2JT44	A0A0G2JT44	A0A0G2JT44_RAT	Tmc6	Transmembrane channel-like protein	1	GAIISQYYNR	GAIISQYYNR	2	GAIISQYYNR2	69093	60705.3	58246.3
F1LN92	F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	1	GAILTGPPGTGK	GAILTGPPGTGK	2	GAILTGPPGTGK2	41478.1	40877.4	42402.3
P11730	P11730	KCC2G_RAT	Camk2g	Calcium/calmodulin-dependent protein kinase type II subunit gamma	1	GAILTTMLVSR	GAILTTMLVSR	2	GAILTTMLVSR2	35627.4	39217.3	49142.2
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	GAIPWGNDVGPSSSSK	GAIPWGNDVGPSSSSK	2	GAIPWGNDVGPSSSSK2	152093	147844	172462
D3ZCT7	D3ZCT7	D3ZCT7_RAT	Sec23b	Protein transport protein SEC23	1	GAIQFVTQYQHSSTQK	GAIQFVTQYQHSSTQK	3	GAIQFVTQYQHSSTQK3	11920.3	15145.5	12205.2
Q5I6B8	Q5I6B8	PI51C_RAT	Pip5k1c	Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma	1	GAIQLGIGYTVGNLSSKPER	GAIQLGIGYTVGNLSSKPER	3	GAIQLGIGYTVGNLSSKPER3	13458.8	7832.69	15777.4
Q5CZZ9	Q5CZZ9	PI51B_RAT	Pip5k1b	Phosphatidylinositol 4-phosphate 5-kinase type-1 beta	1	GAIQLGIGYTVGNLTSKPER	GAIQLGIGYTVGNLTSKPER	3	GAIQLGIGYTVGNLTSKPER3	16419.5	10807.4	15587.4
P09456	P09456	KAP0_RAT	Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit	1	GAISAEVYTEEDAASYVR	GAISAEVYTEEDAASYVR	2	GAISAEVYTEEDAASYVR2	5363.21	5899.73	
D4A830	D4A830	D4A830_RAT	Ppa2	inorganic diphosphatase	1	GAISCVNVHICDSPFHCTTEEAR	GAISC(UniMod:4)VNVHIC(UniMod:4)DSPFHC(UniMod:4)TTEEAR	4	GAISC(UniMod:4)VNVHIC(UniMod:4)DSPFHC(UniMod:4)TTEEAR4	6267.2	11575.5	10172.1
Q5RJY4	Q5RJY4	DRS7B_RAT	Dhrs7b	Dehydrogenase/reductase SDR family member 7B	1	GAISDTIVDVDRK	GAISDTIVDVDRK	2	GAISDTIVDVDRK2	2534.62	2293.03	
Q5RJY4	Q5RJY4	DRS7B_RAT	Dhrs7b	Dehydrogenase/reductase SDR family member 7B	1	GAISDTIVDVDRK	GAISDTIVDVDRK	3	GAISDTIVDVDRK3	40766.7	30922.7	39516.8
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	GAISYPR	GAISYPR	2	GAISYPR2	17619.8	16505.3	22393.4
E9PTT0	E9PTT0	ZDH17_RAT	Zdhhc17	Palmitoyltransferase ZDHHC17	1	GAIVDQLGGDLNSTPLHWATR	GAIVDQLGGDLNSTPLHWATR	3	GAIVDQLGGDLNSTPLHWATR3	3055.19		3652.28
Q4V8B7	Q4V8B7	HSDL1_RAT	Hsdl1	Inactive hydroxysteroid dehydrogenase-like protein 1	1	GAIVTVSSGSCCK	GAIVTVSSGSC(UniMod:4)C(UniMod:4)K	2	GAIVTVSSGSC(UniMod:4)C(UniMod:4)K2	6315.84	5311.67	3737.02
Q4V8B7	Q4V8B7	HSDL1_RAT	Hsdl1	Inactive hydroxysteroid dehydrogenase-like protein 1	1	GAIVTVSSGSCCKPTPQLAAFSASK	GAIVTVSSGSC(UniMod:4)C(UniMod:4)KPTPQLAAFSASK	3	GAIVTVSSGSC(UniMod:4)C(UniMod:4)KPTPQLAAFSASK3	88246.2	80865.8	96899.3
B0LT89	B0LT89	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	1	GAIYLAEEACPGISDTMVAQLVQR	GAIYLAEEAC(UniMod:4)PGISDTMVAQLVQR	3	GAIYLAEEAC(UniMod:4)PGISDTMVAQLVQR3	57460.3	55524.6	51645.7
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	GAKESGLYFIRPLK	GAKESGLYFIRPLK	3	GAKESGLYFIRPLK3	3059.48	1954.33	
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	GAKESGLYFIRPLK	GAKESGLYFIRPLK	4	GAKESGLYFIRPLK4	13959.4	17907.7	9636.67
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	GAKLPITSLEK	GAKLPITSLEK	2	GAKLPITSLEK2	21718.7	29556.4	23473.9
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	GAKLPITSLEK	GAKLPITSLEK	3	GAKLPITSLEK3	76433.1	123432	89127.2
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	GAKPVRPPAPGHGFPLIK	GAKPVRPPAPGHGFPLIK	4	GAKPVRPPAPGHGFPLIK4	8759.19	10711.2	11129.4
D3ZYT2	D3ZYT2	D3ZYT2_RAT	Mrps5	Mitochondrial ribosomal protein S5	1	GALAETGAGAR	GALAETGAGAR	2	GALAETGAGAR2	14422.3	8927.73	8429.93
A0A8I6G4R8	A0A8I6G4R8	A0A8I6G4R8_RAT	Hdac5	Histone deacetylase	1	GALAGPMDPALR	GALAGPMDPALR	2	GALAGPMDPALR2	11900.6	12427.7	13499.8
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	GALALEEK	GALALEEK	1	GALALEEK1	197726	221643	203115
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	GALALEEK	GALALEEK	2	GALALEEK2	1.36281e+07	1.66328e+07	1.62582e+07
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	GALALEEKR	GALALEEKR	2	GALALEEKR2	61467.5	74437	75356.9
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	GALDDAIAFGEK	GALDDAIAFGEK	2	GALDDAIAFGEK2	20068.7	17883.5	28196.8
Q920P0	Q920P0	DCXR_RAT	Dcxr	L-xylulose reductase	1	GALDMLTK	GALDMLTK	2	GALDMLTK2	20518.7		
Q642B4	Q642B4	Q642B4_RAT	Clec14a	C-type lectin domain containing 14A	1	GALDSQGVECDAEATSLR	GALDSQGVEC(UniMod:4)DAEATSLR	2	GALDSQGVEC(UniMod:4)DAEATSLR2	9150.15	13619.3	9865.26
Q642B4	Q642B4	Q642B4_RAT	Clec14a	C-type lectin domain containing 14A	1	GALDSQGVECDAEATSLR	GALDSQGVEC(UniMod:4)DAEATSLR	3	GALDSQGVEC(UniMod:4)DAEATSLR3	9865.94	6278.74	9041.74
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	GALEAYVQSVR	GALEAYVQSVR	2	GALEAYVQSVR2	28536.7	35362.6	31828.2
Q9Z0J5	Q9Z0J5	TRXR2_RAT	Txnrd2	Thioredoxin reductase 2, mitochondrial	1	GALEHGITSDDIFWLK	GALEHGITSDDIFWLK	3	GALEHGITSDDIFWLK3	6575.91	3324.39	11136
Q5U1Z2	Q5U1Z2	TPPC3_RAT	Trappc3	Trafficking protein particle complex subunit 3	1	GALEMVQMAVEAK	GALEMVQMAVEAK	2	GALEMVQMAVEAK2	20112.6	11525.9	15431.2
Q6PCU2	Q6PCU2	VATE1_RAT	Atp6v1e1	V-type proton ATPase subunit E 1	1	GALFGANANR	GALFGANANR	2	GALFGANANR2	47203.7	46477.3	45588.8
D3ZL10	D3ZL10	D3ZL10_RAT	Col6a6	Collagen type VI alpha 6 chain	1	GALGPMGEQGTK	GALGPMGEQGTK	2	GALGPMGEQGTK2	2097.5	1194.82	6799.51
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	GALHTVSHEDIR	GALHTVSHEDIR	2	GALHTVSHEDIR2	5854.69	3748.2	
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	GALHTVSHEDIR	GALHTVSHEDIR	3	GALHTVSHEDIR3	18238.7	20620.9	20210.2
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	GALIHNVSK	GALIHNVSK	2	GALIHNVSK2	53376.5	41104.5	49512.6
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	GALIYLLDMFCNSTHPQVR	GALIYLLDMFC(UniMod:4)NSTHPQVR	3	GALIYLLDMFC(UniMod:4)NSTHPQVR3	4314.94	4964.72	6147.01
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	GALLANFLTQGQVCCNGTR	GALLANFLTQGQVC(UniMod:4)C(UniMod:4)NGTR	3	GALLANFLTQGQVC(UniMod:4)C(UniMod:4)NGTR3	14256	12627.8	26888.7
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	GALLAWCR	GALLAWC(UniMod:4)R	2	GALLAWC(UniMod:4)R2	30333.3	23619.3	34389.7
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	GALLELLK	GALLELLK	2	GALLELLK2	17073.6	17808.2	8867.29
Q7TT47	Q7TT47	SPG7_RAT	Spg7	Paraplegin	1	GALLLGPPGCGK	GALLLGPPGC(UniMod:4)GK	2	GALLLGPPGC(UniMod:4)GK2		7178.55	10324.7
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	GALLLSSLELEELR	GALLLSSLELEELR	2	GALLLSSLELEELR2	7625.65		10526.6
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	GALLLSSLELEELRAENEK	GALLLSSLELEELRAENEK	3	GALLLSSLELEELRAENEK3	53150.7	39926.5	40677.7
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	GALLPFSLR	GALLPFSLR	2	GALLPFSLR2	16286	20695	11903.9
Q3T1I9	Q3T1I9	RPAP1_RAT	Rpap1	RNA polymerase II-associated protein 1	1	GALLVQACQDLPSIR	GALLVQAC(UniMod:4)QDLPSIR	2	GALLVQAC(UniMod:4)QDLPSIR2	16953.4	13390.4	26330.7
Q63054	Q63054;Q6RUG5	ICA69_RAT	Ica1	Islet cell autoantigen 1	0	GALLWMK	GALLWMK	2	GALLWMK2	7355.81	11916.6	8423.16
A0A0G2JVL5	A0A0G2JVL5	A0A0G2JVL5_RAT	Rimoc1	Similar to expressed sequence AW549877	1	GALLYMYCHSLTK	GALLYMYC(UniMod:4)HSLTK	3	GALLYMYC(UniMod:4)HSLTK3	2977.86		2796.03
E9PST5	E9PST5	E9PST5_RAT	Acin1	Apoptotic chromatin condensation inducer 1	1	GALMLENLQK	GALMLENLQK	2	GALMLENLQK2	7270.61	7828.02	
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	GALMNEIQAAK	GALMNEIQAAK	2	GALMNEIQAAK2	59364.9	50349.4	59198.2
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	GALMSAFSPEK	GALMSAFSPEK	2	GALMSAFSPEK2	350539	334138	339678
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	GALPDDTEALQSLIDTHK	GALPDDTEALQSLIDTHK	2	GALPDDTEALQSLIDTHK2	6029.16		2789.68
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	GALPDDTEALQSLIDTHK	GALPDDTEALQSLIDTHK	3	GALPDDTEALQSLIDTHK3	27883.8	48205.5	43807
Q5XI83	Q5XI83	VP35L_RAT	Vps35l	VPS35 endosomal protein-sorting factor-like	1	GALPDHFSPENVNDTAK	GALPDHFSPENVNDTAK	3	GALPDHFSPENVNDTAK3	10620.8	6324.52	7718.11
P52555	P52555	ERP29_RAT	Erp29	Endoplasmic reticulum resident protein 29	1	GALPLDTVTFYK	GALPLDTVTFYK	2	GALPLDTVTFYK2	74279.6	61843.7	70233.1
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	GALPSGTTIEWLEPK	GALPSGTTIEWLEPK	2	GALPSGTTIEWLEPK2	43119.4	44622.1	39924.8
Q80Z70	Q80Z70	SE1L1_RAT	Sel1l	Protein sel-1 homolog 1	1	GALPTDGSVK	GALPTDGSVK	2	GALPTDGSVK2	64343.6	49687.8	49168.5
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	GALQAIDQMSLFR	GALQAIDQMSLFR	2	GALQAIDQMSLFR2	36226.5	36337.2	38482.3
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	GALQAIDQMSLFRPLCK	GALQAIDQMSLFRPLC(UniMod:4)K	3	GALQAIDQMSLFRPLC(UniMod:4)K3	61249.5	63189.1	50555.4
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	GALQLGMVDIAR	GALQLGMVDIAR	2	GALQLGMVDIAR2	10444	13216	6721.18
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	GALQVGDGPR	GALQVGDGPR	2	GALQVGDGPR2	44500.2	42138	48643
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	GALQYLVPILTQTLTK	GALQYLVPILTQTLTK	2	GALQYLVPILTQTLTK2	4974.36	17946	80341.5
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	GALQYLVPILTQTLTK	GALQYLVPILTQTLTK	3	GALQYLVPILTQTLTK3	13967.8		
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	GALSALREEHR	GALSALREEHR	3	GALSALREEHR3	70588.6	61696.9	70520.7
D4A7Z0	D4A7Z0	D4A7Z0_RAT	Wdtc1	WD and tetratricopeptide repeats 1	1	GALSFER	GALSFER	2	GALSFER2	8474.65	9788.14	10070
D4A3I5	D4A3I5	D4A3I5_RAT	Fhip2a	FHF complex subunit HOOK interacting protein 2A	1	GALSVISEDDPK	GALSVISEDDPK	2	GALSVISEDDPK2	9302.8	9682.87	3658.97
A0A8I6AUQ7	A0A8I6AUQ7	A0A8I6AUQ7_RAT	Zpr1	ZPR1 zinc finger	1	GALTTVEGLISR	GALTTVEGLISR	2	GALTTVEGLISR2	61750.7	48398.7	44231.7
O88563	O88563	MRP3_RAT	Abcc3	ATP-binding cassette sub-family C member 3	1	GALVAVVGPVGCGK	GALVAVVGPVGC(UniMod:4)GK	2	GALVAVVGPVGC(UniMod:4)GK2	3275.01		4583.58
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	GALVDCSVALAKPFDK	GALVDC(UniMod:4)SVALAKPFDK	2	GALVDC(UniMod:4)SVALAKPFDK2	4655.98		
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	GALVDCSVALAKPFDK	GALVDC(UniMod:4)SVALAKPFDK	3	GALVDC(UniMod:4)SVALAKPFDK3	35353	29118.6	58270.2
O08730	O08730	GLYG_RAT	Gyg1	Glycogenin-1	1	GALVLGSSLK	GALVLGSSLK	2	GALVLGSSLK2	159348	128625	143502
Q9Z2L0	Q9Z2L0	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	1	GALVLGYEGWLAGYQMNFETSK	GALVLGYEGWLAGYQMNFETSK	3	GALVLGYEGWLAGYQMNFETSK3	15665.3	25155.6	18129.4
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	GALVNVPPPFLGLPR	GALVNVPPPFLGLPR	2	GALVNVPPPFLGLPR2	199313	230502	239940
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	GALVNVPPPFLGLPR	GALVNVPPPFLGLPR	3	GALVNVPPPFLGLPR3	9712.2	9991.16	20145.3
O89035	O89035	DIC_RAT	Slc25a10	Mitochondrial dicarboxylate carrier	1	GALVTVGQLSCYDQAK	GALVTVGQLSC(UniMod:4)YDQAK	2	GALVTVGQLSC(UniMod:4)YDQAK2	30985.7	23275	17813.4
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	GALVVVNDLGGDFK	GALVVVNDLGGDFK	2	GALVVVNDLGGDFK2	94192.4	77312.6	72966.5
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	GALWILGEYCSTK	GALWILGEYC(UniMod:4)STK	2	GALWILGEYC(UniMod:4)STK2	113554	108316	119907
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	GALWILGEYCSTK	GALWILGEYC(UniMod:4)STK	3	GALWILGEYC(UniMod:4)STK3	4716.77	8089.03	8375.92
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	GALYCELCYEK	GALYC(UniMod:4)ELC(UniMod:4)YEK	2	GALYC(UniMod:4)ELC(UniMod:4)YEK2	64043.6	75447.1	68178.6
D3ZRB3	D3ZRB3	D3ZRB3_RAT	Rhof	Ras homolog family member F, filopodia associated	1	GALYLECSAK	GALYLEC(UniMod:4)SAK	2	GALYLEC(UniMod:4)SAK2	136138	120431	131983
D3Z8E0	D3Z8E0	D3Z8E0_RAT	Rps6ka3	Ribosomal protein S6 kinase	1	GAMAATYSALNR	GAMAATYSALNR	2	GAMAATYSALNR2	6925.57	7628.3	6281.53
D4AE80	D4AE80	D4AE80_RAT	Dcp1a	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	GAMAPNFSSAAGQLATPESFIEPSSK	GAMAPNFSSAAGQLATPESFIEPSSK	3	GAMAPNFSSAAGQLATPESFIEPSSK3	8907.89	13228.7	10455.9
P35286	P35286	RAB13_RAT	Rab13	Ras-related protein Rab-13	1	GAMGIILVYDITDEK	GAMGIILVYDITDEK	2	GAMGIILVYDITDEK2	10019.1	7597.47	13292.1
P35280	P70550;P35280	RAB8A_RAT	Rab8a	Ras-related protein Rab-8A	0	GAMGIMLVYDITNEK	GAMGIMLVYDITNEK	2	GAMGIMLVYDITNEK2	77046	82663.4	81276.8
P35280	P70550;P35280	RAB8A_RAT	Rab8a	Ras-related protein Rab-8A	0	GAMGIMLVYDITNEK	GAMGIMLVYDITNEK	3	GAMGIMLVYDITNEK3	18564.1		11436.6
P35281	P35281	RAB10_RAT	Rab10	Ras-related protein Rab-10	1	GAMGIMLVYDITNGK	GAMGIMLVYDITNGK	2	GAMGIMLVYDITNGK2	65180.9	104042	77845
P35281	P35281	RAB10_RAT	Rab10	Ras-related protein Rab-10	1	GAMGIMLVYDITNGK	GAMGIMLVYDITNGK	3	GAMGIMLVYDITNGK3	8724.71	5321.7	4481.73
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	GAMLTHQNIVSNMAAFLK	GAMLTHQNIVSNMAAFLK	3	GAMLTHQNIVSNMAAFLK3	52872.4	54321.9	47750.3
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	GAMSTEQIK	GAMSTEQIK	2	GAMSTEQIK2	8846.14	7739.31	4236.27
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	GAMSVDSITDLDDNQSR	GAMSVDSITDLDDNQSR	2	GAMSVDSITDLDDNQSR2	72650.4	81664.7	70755.1
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	GAMSVDSITDLDDNQSR	GAMSVDSITDLDDNQSR	3	GAMSVDSITDLDDNQSR3	13423.2		4834.93
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	GAMVTHQNIMNDCSGFIK	GAMVTHQNIMNDC(UniMod:4)SGFIK	3	GAMVTHQNIMNDC(UniMod:4)SGFIK3	27534.1	21890	18734
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	GANAHLSTFSFTK	GANAHLSTFSFTK	3	GANAHLSTFSFTK3	31218.4	46709.8	30324.1
P52873	P52873	PYC_RAT	Pc	Pyruvate carboxylase, mitochondrial	1	GANAVGYTNYPDNVVFK	GANAVGYTNYPDNVVFK	2	GANAVGYTNYPDNVVFK2	3414.01	7774.83	5015.48
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	GANDFMCDEMER	GANDFMC(UniMod:4)DEMER	2	GANDFMC(UniMod:4)DEMER2	194604	191499	202038
A0A0G2K069	A0A0G2K069	A0A0G2K069_RAT	Col11a2	Collagen type XI alpha 2 chain	1	GANEDELSPETSPYVK	GANEDELSPETSPYVK	2	GANEDELSPETSPYVK2	21534.9	14107.6	7267.22
A0A8I5ZNI3	A0A8I5ZNI3	A0A8I5ZNI3_RAT	Glipr1	GLI pathogenesis-related 1	1	GANFICNYGPAGNYPTWPYK	GANFIC(UniMod:4)NYGPAGNYPTWPYK	3	GANFIC(UniMod:4)NYGPAGNYPTWPYK3	25447.9	31814.6	34780.5
D4A8N1	D4A8N1	D4A8N1_RAT	Dpm1	Dolichol-phosphate mannosyltransferase subunit 1	1	GANFITQILLRPGASDLTGSFR	GANFITQILLRPGASDLTGSFR	3	GANFITQILLRPGASDLTGSFR3	40964.6	34955.9	21549.4
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	GANILINDSGEVK	GANILINDSGEVK	2	GANILINDSGEVK2	17206.4	24821.5	16105.1
A0A8I5ZRD0	A0A8I5ZRD0;A0A8I6AGL0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	0	GANINAFDK	GANINAFDK	2	GANINAFDK2	24372.2	33743	20400.1
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	GANIQLLDLPGIIEGAAQGR	GANIQLLDLPGIIEGAAQGR	3	GANIQLLDLPGIIEGAAQGR3	29339.2	32002.9	27395.7
D3ZXB1	D3ZXB1	D3ZXB1_RAT	Map4k2	Mitogen-activated protein kinase kinase kinase kinase 2	1	GANLLLTLQGDVK	GANLLLTLQGDVK	2	GANLLLTLQGDVK2	9860.45	12859.7	7279.7
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	GANPHLQTFTFTR	GANPHLQTFTFTR	2	GANPHLQTFTFTR2	67206.3	73944.3	62670.1
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	GANPHLQTFTFTR	GANPHLQTFTFTR	3	GANPHLQTFTFTR3	615329	575095	634522
P63039	A0A8I5ZVK6;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	GANPVEIR	GANPVEIR	2	GANPVEIR2	579411	625651	674536
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	GANPVNPDK	GANPVNPDK	2	GANPVNPDK2	32733.5	25504.8	30154
D4A5G8	D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	GANQWIK	GANQWIK	2	GANQWIK2	91207.2	77239.7	85288.7
P29117	P29117	PPIF_RAT	Ppif	Peptidyl-prolyl cis-trans isomerase F, mitochondrial	1	GANSSSQNPLVYLDVGADGQPLGR	GANSSSQNPLVYLDVGADGQPLGR	3	GANSSSQNPLVYLDVGADGQPLGR3	356086	317451	340025
A0A096MK24	A0A096MK24	A0A096MK24_RAT	Morc4	Microrchidia 4	1	GAPAAPGTPR	GAPAAPGTPR	2	GAPAAPGTPR2	18273.1	13655.5	20378.5
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	GAPADAHGEGSSLLK	GAPADAHGEGSSLLK	2	GAPADAHGEGSSLLK2	15651.8		18213.9
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	GAPADAHGEGSSLLK	GAPADAHGEGSSLLK	3	GAPADAHGEGSSLLK3	95218.2	93214.8	92321.2
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	GAPAEDQDCGR	GAPAEDQDC(UniMod:4)GR	2	GAPAEDQDC(UniMod:4)GR2			31032.9
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	GAPAEDQDCGRLPDFIAK	GAPAEDQDC(UniMod:4)GRLPDFIAK	3	GAPAEDQDC(UniMod:4)GRLPDFIAK3	74291.8	88274.1	99962.7
Q9JJ76	Q9JJ76	Q9JJ76_RAT	Csnk1e	Casein kinase 1 epsilon	1	GAPANVSSSDLTGR	GAPANVSSSDLTGR	2	GAPANVSSSDLTGR2	9355.22	7662.4	9518.69
Q6AY72	Q6AY72	CS025_RAT		UPF0449 protein C19orf25 homolog	1	GAPAQDPVFTALAPEDPLEPLPR	GAPAQDPVFTALAPEDPLEPLPR	3	GAPAQDPVFTALAPEDPLEPLPR3	16458.2	17290.4	10368.7
Q63737	A0A8I6A6H0;Q63737	PHLP_RAT	Pdcl	Phosducin-like protein	0	GAPASSSTPAEAELAGEGISVNTGPK	GAPASSSTPAEAELAGEGISVNTGPK	3	GAPASSSTPAEAELAGEGISVNTGPK3	26014.9	24961.9	19412
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	GAPAVYSEK	GAPAVYSEK	2	GAPAVYSEK2	34141.4	37774.6	42778.3
Q01460	Q01460	DIAC_RAT	Ctbs	Di-N-acetylchitobiase	1	GAPCSDAAGHQVPYR	GAPC(UniMod:4)SDAAGHQVPYR	3	GAPC(UniMod:4)SDAAGHQVPYR3	9813.21	10724	15172.6
P58751	P58751	RELN_RAT	Reln	Reelin	1	GAPEEDSAMVFVSNEIGEHSITTR	GAPEEDSAMVFVSNEIGEHSITTR	3	GAPEEDSAMVFVSNEIGEHSITTR3	50409.8	43356.2	56034.9
P11507	Q64578;P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	0	GAPEGVIDR	GAPEGVIDR	2	GAPEGVIDR2	376890	355449	373903
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	GAPESVIER	GAPESVIER	2	GAPESVIER2	2.48932e+06	2.44056e+06	2.58061e+06
F1LNH3	F1LNH3	F1LNH3_RAT	Col6a2	Collagen type VI alpha 2 chain	1	GAPGLAGK	GAPGLAGK	1	GAPGLAGK1		13094.9	
A0A8I6AN39	A0A8I6AN39	A0A8I6AN39_RAT	Eefsec	Eukaryotic elongation factor, selenocysteine-tRNA-specific	1	GAPIIPVAAK	GAPIIPVAAK	2	GAPIIPVAAK2	4097.38		2712.06
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	GAPLNTPVTEDR	GAPLNTPVTEDR	2	GAPLNTPVTEDR2	130242	128596	127109
O88902	O88902	PTN23_RAT	Ptpn23	Tyrosine-protein phosphatase non-receptor type 23 (Fragment)	1	GAPLVKPLPVNPTDPAVTGPDIFAK	GAPLVKPLPVNPTDPAVTGPDIFAK	3	GAPLVKPLPVNPTDPAVTGPDIFAK3	13188.6	8217.3	12761.3
D3Z9K9	D3Z9K9	D3Z9K9_RAT	Gdpd2	Glycerophosphodiester phosphodiesterase domain containing 2	1	GAPMLAPENTLMSLR	GAPMLAPENTLMSLR	2	GAPMLAPENTLMSLR2	357954	385553	457274
D3Z9K9	D3Z9K9	D3Z9K9_RAT	Gdpd2	Glycerophosphodiester phosphodiesterase domain containing 2	1	GAPMLAPENTLMSLR	GAPMLAPENTLMSLR	3	GAPMLAPENTLMSLR3		5432.71	7459.74
D3Z9K9	D3Z9K9	D3Z9K9_RAT	Gdpd2	Glycerophosphodiester phosphodiesterase domain containing 2	1	GAPMLAPENTLMSLRK	GAPMLAPENTLMSLRK	3	GAPMLAPENTLMSLRK3			4965.94
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	GAPNADLIFK	GAPNADLIFK	2	GAPNADLIFK2	43901.5	48425.2	42379.3
Q6IN36	Q6IN36	WIPF1_RAT	Wipf1	WAS/WASL-interacting protein family member 1	1	GAPPLPPIPR	GAPPLPPIPR	2	GAPPLPPIPR2	392813	392575	381335
Q4KLG1	Q4KLG1	Q4KLG1_RAT	Mospd3	Motile sperm domain containing 3	1	GAPQDQELVGPGAPGR	GAPQDQELVGPGAPGR	2	GAPQDQELVGPGAPGR2	6286.44	4873.47	
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	GAPQHYPK	GAPQHYPK	2	GAPQHYPK2			41559.6
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	GAPQSLLLSESGK	GAPQSLLLSESGK	2	GAPQSLLLSESGK2	31323.8	30843.1	24544
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	GAPSSSGGSSISGPK	GAPSSSGGSSISGPK	2	GAPSSSGGSSISGPK2	58648.3	48011.2	56520
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	GAPVGGHILSYLLEK	GAPVGGHILSYLLEK	2	GAPVGGHILSYLLEK2	77801.2	88960.3	45532.5
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	GAPVGGHILSYLLEK	GAPVGGHILSYLLEK	3	GAPVGGHILSYLLEK3	158958	181253	166481
M0RC99	M0RC99	RAB5A_RAT	Rab5a	Ras-related protein Rab-5A	1	GAQAAIVVYDITNEESFSR	GAQAAIVVYDITNEESFSR	3	GAQAAIVVYDITNEESFSR3	9790.27	10682	17118.4
A1L1J8	A1L1J8	A1L1J8_RAT	Rab5b	RAB5B, member RAS oncogene family	1	GAQAAIVVYDITNQETFAR	GAQAAIVVYDITNQETFAR	3	GAQAAIVVYDITNQETFAR3	26976.7	24225.3	24844.8
B0BNK1	B0BNK1	B0BNK1_RAT	Rab5c	RAB5C, member RAS oncogene family	1	GAQAAIVVYDITNTDTFAR	GAQAAIVVYDITNTDTFAR	3	GAQAAIVVYDITNTDTFAR3	48154.4	43153.3	67622.9
Q5XI97	Q5XI97	AASD1_RAT	Aarsd1	Alanyl-tRNA editing protein Aarsd1	1	GAQADHFTQTPLSPGSQVQVR	GAQADHFTQTPLSPGSQVQVR	3	GAQADHFTQTPLSPGSQVQVR3	6162.05	7932.4	10434.5
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	GAQAESSFNPSWSLK	GAQAESSFNPSWSLK	2	GAQAESSFNPSWSLK2	2017.09	2758.59	5460.1
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	GAQATLSNTTK	GAQATLSNTTK	2	GAQATLSNTTK2	303691	319252	332538
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	GAQDALNPEDEVDEFLGR	GAQDALNPEDEVDEFLGR	3	GAQDALNPEDEVDEFLGR3	2863.71	7210.09	12639.5
B1PLB1	B1PLB1	B1PLB1_RAT	Cd34	CD34 molecule	1	GAQENGTGQATSR	GAQENGTGQATSR	2	GAQENGTGQATSR2			42814
F1M7Z1	F1M7Z1	F1M7Z1_RAT	Edc3	Enhancer of mRNA-decapping protein 3	1	GAQGISCGR	GAQGISC(UniMod:4)GR	2	GAQGISC(UniMod:4)GR2	24185.9	26979.8	16300.5
Q5EB77	A0A8I5ZQR4;Q5EB77	RAB18_RAT	Rab18	Ras-related protein Rab-18	0	GAQGVILVYDVTR	GAQGVILVYDVTR	2	GAQGVILVYDVTR2	123569	100781	143025
Q5EB77	A0A8I5ZQR4;Q5EB77	RAB18_RAT	Rab18	Ras-related protein Rab-18	0	GAQGVILVYDVTR	GAQGVILVYDVTR	3	GAQGVILVYDVTR3	4913.87	7817.1	7470.17
Q5XIM0	Q5XIM0	Q5XIM0_RAT	Bcs1l	Mitochondrial chaperone BCS1	1	GAQLGLVAFR	GAQLGLVAFR	2	GAQLGLVAFR2	4681.33		8123.28
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	GAQLSASSPAR	GAQLSASSPAR	2	GAQLSASSPAR2	4145.56	6250.35	
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	GAQQISALLQTR	GAQQISALLQTR	2	GAQQISALLQTR2	65673.9	58592.4	63088.4
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	GAQQISALLQTR	GAQQISALLQTR	3	GAQQISALLQTR3	34772.1	42238.1	36333
B0BNC9	B0BNC9	QORL2_RAT		Quinone oxidoreductase-like protein 2	1	GAQSGVNYSQGSLK	GAQSGVNYSQGSLK	2	GAQSGVNYSQGSLK2	3344.07	2642.98	4240.05
D4A4L5	D4A4L5;A0A8I5ZSL2	D4A4L5_RAT	Isca2	Iron-sulfur cluster assembly 2	0	GAQVDFSQELIR	GAQVDFSQELIR	2	GAQVDFSQELIR2	9118.93	4389.95	4821.55
A0A8I6GL10	A0A8I6GL10	A0A8I6GL10_RAT	Uchl5	Ubiquitin carboxyl-terminal hydrolase	1	GAQVEEIWSLEPENFEK	GAQVEEIWSLEPENFEK	3	GAQVEEIWSLEPENFEK3		6736.68	
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	GAQVQVLQGK	GAQVQVLQGK	2	GAQVQVLQGK2	19034	19901.9	19221.5
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	GAQWYLIDSR	GAQWYLIDSR	2	GAQWYLIDSR2	44157.3	54911.3	35091
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	GASAILPGAPGDEAPGSEVFQGPEEK	GASAILPGAPGDEAPGSEVFQGPEEK	3	GASAILPGAPGDEAPGSEVFQGPEEK3	28811.4	25912.3	31962.8
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	GASAINWTLIHGDK	GASAINWTLIHGDK	3	GASAINWTLIHGDK3	1069.29		4616.26
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	GASAINWTLIHGDKK	GASAINWTLIHGDKK	4	GASAINWTLIHGDKK4	2013.72		3614.88
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	GASCSAQGFDYGLGNNK	GASC(UniMod:4)SAQGFDYGLGNNK	2	GASC(UniMod:4)SAQGFDYGLGNNK2	6662.34	6354.21	5638.74
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	GASDTYVTYLIR	GASDTYVTYLIR	2	GASDTYVTYLIR2	324948	313975	376344
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	GASDTYVTYLIR	GASDTYVTYLIR	3	GASDTYVTYLIR3	16009.2	18330.5	26515.2
P11505	P11505	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	1	GASEIILK	GASEIILK	2	GASEIILK2	15799.5	12944.8	18426.7
Q64568	Q64568	AT2B3_RAT	Atp2b3	Plasma membrane calcium-transporting ATPase 3	1	GASEILLK	GASEILLK	2	GASEILLK2	17737.3		
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	GASFEELCHNYAQDR	GASFEELC(UniMod:4)HNYAQDR	3	GASFEELC(UniMod:4)HNYAQDR3	12360	17871.4	24682.2
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	GASFGSAGASGSEPVMR	GASFGSAGASGSEPVMR	2	GASFGSAGASGSEPVMR2	26887.4	26015.2	25168.5
E9PTA5	E9PTA5	E9PTA5_RAT	Pign	GPI ethanolamine phosphate transferase 1	1	GASGDHVYTYSYDAQR	GASGDHVYTYSYDAQR	3	GASGDHVYTYSYDAQR3	12942.1	6422.13	12401.1
E9PTA5	E9PTA5	E9PTA5_RAT	Pign	GPI ethanolamine phosphate transferase 1	1	GASGDHVYTYSYDAQREDFGAHDATK	GASGDHVYTYSYDAQREDFGAHDATK	4	GASGDHVYTYSYDAQREDFGAHDATK4	5611.79	1844.68	5210.39
O08679	O08679	MARK2_RAT	Mark2	Serine/threonine-protein kinase MARK2	1	GASGSIFSK	GASGSIFSK	2	GASGSIFSK2	5439.07	3628.46	4396.89
Q5RJK6	Q5RJK6	Q5RJK6_RAT	Inpp1	Inositol polyphosphate-1-phosphatase	1	GASGVDLWANK	GASGVDLWANK	2	GASGVDLWANK2	5448.26	3957.67	6876.7
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	GASIAHCPNSNLSLSSGLLNVLDVLK	GASIAHC(UniMod:4)PNSNLSLSSGLLNVLDVLK	3	GASIAHC(UniMod:4)PNSNLSLSSGLLNVLDVLK3	11443.2	6076.46	10312.5
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	GASIVEDK	GASIVEDK	1	GASIVEDK1	3634.55	2417.51	
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	GASIVEDK	GASIVEDK	2	GASIVEDK2	272068	322879	345286
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	GASLFTCDLQHTETGEEVLR	GASLFTC(UniMod:4)DLQHTETGEEVLR	3	GASLFTC(UniMod:4)DLQHTETGEEVLR3	4451.85	4783.97	4582.77
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	GASLLLMLK	GASLLLMLK	2	GASLLLMLK2	6891.83	11542.8	7038.07
F1M5M9	F1M287;F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	0	GASLLLYHR	GASLLLYHR	2	GASLLLYHR2	18592	16896.7	7789.65
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	GASLLLYQR	GASLLLYQR	2	GASLLLYQR2	55486.4	44583	44268.1
B5DEH0	B5DEH0	LIMD1_RAT	Limd1	LIM domain-containing protein 1	1	GASNNPEFEETRR	GASNNPEFEETRR	3	GASNNPEFEETRR3		26613.2	19086.8
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	GASPNVSNVK	GASPNVSNVK	2	GASPNVSNVK2	28635.9	18154.8	18334.7
P37397	P37397	CNN3_RAT	Cnn3	Calponin-3	1	GASQAGMSAPGTR	GASQAGMSAPGTR	2	GASQAGMSAPGTR2	5655.42	3188.41	1711.57
Q5XFX0	Q5XFX0;P37805	TAGL2_RAT	Tagln2	Transgelin-2	0	GASQAGMTGYGMPR	GASQAGMTGYGMPR	2	GASQAGMTGYGMPR2	239646	222292	200253
Q5XFX0	Q5XFX0;P37805	TAGL2_RAT	Tagln2	Transgelin-2	0	GASQAGMTGYGMPR	GASQAGMTGYGMPR	3	GASQAGMTGYGMPR3	22353	17716.5	11407.5
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	GASQEAEITSR	GASQEAEITSR	2	GASQEAEITSR2	22640.1	13604.4	20812.9
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	GASSAYLENSK	GASSAYLENSK	2	GASSAYLENSK2	14816.7	16008.6	11717.8
Q9EQV9	Q9EQV9	CBPB2_RAT	Cpb2	Carboxypeptidase B2	1	GASSFSCSETYCGLYPESEPEVK	GASSFSC(UniMod:4)SETYC(UniMod:4)GLYPESEPEVK	3	GASSFSC(UniMod:4)SETYC(UniMod:4)GLYPESEPEVK3	29262	30878.5	27294.6
O55043	O55043	ARHG7_RAT	Arhgef7	Rho guanine nucleotide exchange factor 7	1	GASSPGILVLTTGLSK	GASSPGILVLTTGLSK	2	GASSPGILVLTTGLSK2	6124.46	5715.94	3267.51
O55043	O55043	ARHG7_RAT	Arhgef7	Rho guanine nucleotide exchange factor 7	1	GASSPGILVLTTGLSKPFMR	GASSPGILVLTTGLSKPFMR	3	GASSPGILVLTTGLSKPFMR3	17430.8	20242.7	14834.2
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	GASSPLITVFTDDK	GASSPLITVFTDDK	2	GASSPLITVFTDDK2	37263.1	26396.2	28735.1
P08650	P08650	CO5_RAT	C5	Complement C5	1	GASSSAWLTAFALR	GASSSAWLTAFALR	2	GASSSAWLTAFALR2	224978	153755	153614
P08650	P08650	CO5_RAT	C5	Complement C5	1	GASSSAWLTAFALR	GASSSAWLTAFALR	3	GASSSAWLTAFALR3	29536.5	19312.8	29724.3
D3Z8E6	D3Z8E6	CAMP1_RAT	Camsap1	Calmodulin-regulated spectrin-associated protein 1	1	GASTFSPSHPLLPLR	GASTFSPSHPLLPLR	3	GASTFSPSHPLLPLR3	3982.88	1871.04	4553.73
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	GASVEHVCHR	GASVEHVC(UniMod:4)HR	2	GASVEHVC(UniMod:4)HR2			7844.71
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	GASVEHVCHR	GASVEHVC(UniMod:4)HR	3	GASVEHVC(UniMod:4)HR3			27177
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	GATAKEPEIETCPGTGPSGGR	GATAKEPEIETC(UniMod:4)PGTGPSGGR	3	GATAKEPEIETC(UniMod:4)PGTGPSGGR3	21984.9	16554.3	18822.2
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	GATALELMVIEVPR	GATALELMVIEVPR	2	GATALELMVIEVPR2	367515	360315	411031
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	GATALELMVIEVPR	GATALELMVIEVPR	3	GATALELMVIEVPR3	276483	173928	213452
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	GATDVDRNGYPDLVVGAFGVDR	GATDVDRNGYPDLVVGAFGVDR	3	GATDVDRNGYPDLVVGAFGVDR3	8433.26	13322.1	17586.2
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	GATELTHEDYMEGILEVQAK	GATELTHEDYMEGILEVQAK	3	GATELTHEDYMEGILEVQAK3	39859.4	12522.7	37147.4
Q9Z1Z1	Q9Z1Z1	E2AK3_RAT	Eif2ak3	Eukaryotic translation initiation factor 2-alpha kinase 3	1	GATENSVYLGMYR	GATENSVYLGMYR	2	GATENSVYLGMYR2	7016.69	5954.44	4264.11
G3V6R7	G3V6R7	G3V6R7_RAT	Oxsm	3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial	1	GATGHLLGAAGAVEAAFTALACYHHK	GATGHLLGAAGAVEAAFTALAC(UniMod:4)YHHK	4	GATGHLLGAAGAVEAAFTALAC(UniMod:4)YHHK4	3469.21	2610.77	6079.74
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	GATIVDALDTLFIMGMK	GATIVDALDTLFIMGMK	2	GATIVDALDTLFIMGMK2			9413.06
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	GATLNPWR	GATLNPWR	2	GATLNPWR2	316735	313176	331720
P31652	P31652	SC6A4_RAT	Slc6a4	Sodium-dependent serotonin transporter	1	GATLPGAWR	GATLPGAWR	2	GATLPGAWR2	76791.5	57191.7	56534.5
Q499N5	Q499N5	ACSF2_RAT	Acsf2	Medium-chain acyl-CoA ligase ACSF2, mitochondrial	1	GATLSHHNIVNNSNLIGQR	GATLSHHNIVNNSNLIGQR	4	GATLSHHNIVNNSNLIGQR4	10238.3	14696.1	7711.32
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	GATPEGIFLR	GATPEGIFLR	2	GATPEGIFLR2	31791.3	24337.7	32992.2
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	GATPYGGVK	GATPYGGVK	1	GATPYGGVK1	11054.2	8278.51	10326.7
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	GATPYGGVK	GATPYGGVK	2	GATPYGGVK2	144145	109913	138513
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	GATQGDVLVLR	GATQGDVLVLR	2	GATQGDVLVLR2	17423.8	17441.4	10793.1
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	GATQQILDEAER	GATQQILDEAER	2	GATQQILDEAER2	231859	201820	222926
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	GATSGGFQNLENLDLTLNHK	GATSGGFQNLENLDLTLNHK	3	GATSGGFQNLENLDLTLNHK3	6896.58	2013.37	7628.63
A0A8I6GJ11	A0A8I6GJ11	A0A8I6GJ11_RAT	Acss2	propionate--CoA ligase	1	GATTNICYNVLDR	GATTNIC(UniMod:4)YNVLDR	2	GATTNIC(UniMod:4)YNVLDR2	7728.9	9191.1	11469.1
B2RZ77	B2RZ77	B2RZ77_RAT	Dpt	Dermatopontin	1	GATTTFSAVER	GATTTFSAVER	2	GATTTFSAVER2	851905	808343	985818
B2RZ77	B2RZ77	B2RZ77_RAT	Dpt	Dermatopontin	1	GATTTFSAVERDR	GATTTFSAVERDR	3	GATTTFSAVERDR3	23157.4	29890.9	28371.5
Q32PY2	Q32PY2	LIPH_RAT	Liph	Lipase member H	1	GATTVIYPHASSK	GATTVIYPHASSK	3	GATTVIYPHASSK3	7889.03	3091.15	3426.25
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	GATVLPANTPGSTGSGK	GATVLPANTPGSTGSGK	2	GATVLPANTPGSTGSGK2	234111	240621	211809
P51650	P51650	SSDH_RAT	Aldh5a1	Succinate-semialdehyde dehydrogenase, mitochondrial	1	GATVVTGGK	GATVVTGGK	2	GATVVTGGK2	16475		
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	GATYAFSGSHYWR	GATYAFSGSHYWR	2	GATYAFSGSHYWR2	169964	162160	162491
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	GATYAFSGSHYWR	GATYAFSGSHYWR	3	GATYAFSGSHYWR3	536066	550005	670172
Q8VHE9	Q8VHE9	RETST_RAT	Retsat	All-trans-retinol 13,14-reductase	1	GATYGADHDLAR	GATYGADHDLAR	2	GATYGADHDLAR2	5584.16	4177.95	10499.4
Q8VHE9	Q8VHE9	RETST_RAT	Retsat	All-trans-retinol 13,14-reductase	1	GATYGADHDLAR	GATYGADHDLAR	3	GATYGADHDLAR3	12490	22024.2	22670.8
P61314	P61314;A0A8I5ZY58	RL15_RAT	Rpl15	Large ribosomal subunit protein eL15	0	GATYGKPVHHGVNQLK	GATYGKPVHHGVNQLK	2	GATYGKPVHHGVNQLK2	1538.85	1904.93	
P61314	P61314;A0A8I5ZY58	RL15_RAT	Rpl15	Large ribosomal subunit protein eL15	0	GATYGKPVHHGVNQLK	GATYGKPVHHGVNQLK	3	GATYGKPVHHGVNQLK3	21679.1	17280.3	18050.8
P61314	P61314;A0A8I5ZY58	RL15_RAT	Rpl15	Large ribosomal subunit protein eL15	0	GATYGKPVHHGVNQLK	GATYGKPVHHGVNQLK	4	GATYGKPVHHGVNQLK4	20533.6	25714.2	14997.6
B4F779	B4F779	DP13B_RAT	Appl2	DCC-interacting protein 13-beta	1	GAVAGGLIQDLDNCSVMAVDCEDRR	GAVAGGLIQDLDNC(UniMod:4)SVMAVDC(UniMod:4)EDRR	3	GAVAGGLIQDLDNC(UniMod:4)SVMAVDC(UniMod:4)EDRR3	7946.53	9154.83	8023.29
A0A8I6AMS6	A0A8I6AMS6	A0A8I6AMS6_RAT	Rangap1	RAN GTPase activating protein 1	1	GAVAIADAVR	GAVAIADAVR	2	GAVAIADAVR2	51273.7	34841.6	41192.8
A0A0G2K5W1	A0A0G2K5W1	A0A0G2K5W1_RAT	Nckap5l	NCK-associated protein 5-like	1	GAVALGTSSLK	GAVALGTSSLK	2	GAVALGTSSLK2	5742.14	2481.15	
D3ZQQ1	D3ZQQ1	D3ZQQ1_RAT	Aftph	Aftiphilin	1	GAVASGHLQEPATSAQTALLNR	GAVASGHLQEPATSAQTALLNR	3	GAVASGHLQEPATSAQTALLNR3	20161.1	18619.8	10681.7
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	GAVASVTFDDFHK	GAVASVTFDDFHK	2	GAVASVTFDDFHK2	34546.6	32515.8	28316.1
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	GAVASVTFDDFHK	GAVASVTFDDFHK	3	GAVASVTFDDFHK3	152557	151065	172095
A0A8I5ZQ24	A0A8I5ZQ24	A0A8I5ZQ24_RAT	Atp6v1h	V-type proton ATPase subunit H	1	GAVDAAVPTNIIAAK	GAVDAAVPTNIIAAK	2	GAVDAAVPTNIIAAK2	39856.9	32261.9	32424.6
P09895	A0A8I6GKE4;P09895	RL5_RAT	Rpl5	Large ribosomal subunit protein uL18	0	GAVDGGLSIPHSTK	GAVDGGLSIPHSTK	2	GAVDGGLSIPHSTK2	2483.48	3119.66	3775.3
P09895	A0A8I6GKE4;P09895	RL5_RAT	Rpl5	Large ribosomal subunit protein uL18	0	GAVDGGLSIPHSTK	GAVDGGLSIPHSTK	3	GAVDGGLSIPHSTK3	60375.2	48597.3	35061.4
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	GAVDIPAAASFK	GAVDIPAAASFK	2	GAVDIPAAASFK2	60037.4	61069	51133.3
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	GAVEAAHQAAPGWGAQSPR	GAVEAAHQAAPGWGAQSPR	2	GAVEAAHQAAPGWGAQSPR2	3798.01	1215.99	
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	GAVEAAHQAAPGWGAQSPR	GAVEAAHQAAPGWGAQSPR	3	GAVEAAHQAAPGWGAQSPR3	105976	91041.7	97526.8
P63036	P63036	DNJA1_RAT	Dnaja1	DnaJ homolog subfamily A member 1	1	GAVECCPNCR	GAVEC(UniMod:4)C(UniMod:4)PNC(UniMod:4)R	2	GAVEC(UniMod:4)C(UniMod:4)PNC(UniMod:4)R2	28481	28445.9	
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	GAVEEEVEPSYPILGR	GAVEEEVEPSYPILGR	2	GAVEEEVEPSYPILGR2	54460.4	54481.7	69854.4
A0A0G2K0J8	A0A0G2K0J8	A0A0G2K0J8_RAT	Ints6l	Integrator complex subunit 6 like	1	GAVELFLK	GAVELFLK	2	GAVELFLK2	24294.4	25082.2	26640.5
O35509	O35509;P62494	RB11B_RAT	Rab11b	Ras-related protein Rab-11B	0	GAVGALLVYDIAK	GAVGALLVYDIAK	2	GAVGALLVYDIAK2	1.23373e+06	1.10342e+06	1.27258e+06
O35509	O35509;P62494	RB11B_RAT	Rab11b	Ras-related protein Rab-11B	0	GAVGALLVYDIAK	GAVGALLVYDIAK	3	GAVGALLVYDIAK3	28869.6	19302.6	24451.3
A0A8I6AQR3	A0A8I6AQR3	A0A8I6AQR3_RAT	Tmem263	Transmembrane protein 263	1	GAVGATIGGVAWIGGK	GAVGATIGGVAWIGGK	2	GAVGATIGGVAWIGGK2	17349.4	4897.83	12726.6
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	GAVGLSDVVIPENPEAYVK	GAVGLSDVVIPENPEAYVK	2	GAVGLSDVVIPENPEAYVK2	7572.69	9161.35	
P11348	P11348	DHPR_RAT	Qdpr	Dihydropteridine reductase	1	GAVHQLCQSLAGK	GAVHQLC(UniMod:4)QSLAGK	2	GAVHQLC(UniMod:4)QSLAGK2	6847.82	6434.56	5471.47
P11348	P11348	DHPR_RAT	Qdpr	Dihydropteridine reductase	1	GAVHQLCQSLAGK	GAVHQLC(UniMod:4)QSLAGK	3	GAVHQLC(UniMod:4)QSLAGK3	20045	25054.1	15784.8
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	GAVIATELK	GAVIATELK	1	GAVIATELK1	1325.21	3420.48	
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	GAVIATELK	GAVIATELK	2	GAVIATELK2	265496	279751	279644
E9PU37	E9PU37	E9PU37_RAT	Zdhhc13	Palmitoyltransferase	1	GAVIDQLGGDLNSTPLHWAIR	GAVIDQLGGDLNSTPLHWAIR	3	GAVIDQLGGDLNSTPLHWAIR3	10850.4	14686.7	21187.2
Q76LD0	Q76LD0	CRDL1_RAT	Chrdl1	Chordin-like protein 1	1	GAVIDSQQASGTIVQIVINNK	GAVIDSQQASGTIVQIVINNK	3	GAVIDSQQASGTIVQIVINNK3	23576.2	28716	22584.2
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	GAVISPAELEAPILVPHTAQR	GAVISPAELEAPILVPHTAQR	3	GAVISPAELEAPILVPHTAQR3	35749.9	50452.9	36807.7
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	GAVITQIR	GAVITQIR	2	GAVITQIR2	31609.4	26278.4	28487.5
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	GAVIVVSHDAR	GAVIVVSHDAR	2	GAVIVVSHDAR2	22995.7	25571.5	26981.1
Q64605	Q64605	PTPRS_RAT	Ptprs	Receptor-type tyrosine-protein phosphatase S	1	GAVLGRPTLSVQQTPEGSLLAR	GAVLGRPTLSVQQTPEGSLLAR	3	GAVLGRPTLSVQQTPEGSLLAR3	5068.42	5189.72	7305.75
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	GAVLPHFNVLFDGLSK	GAVLPHFNVLFDGLSK	2	GAVLPHFNVLFDGLSK2	16968	16454.2	23433.7
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	GAVLPHFNVLFDGLSK	GAVLPHFNVLFDGLSK	3	GAVLPHFNVLFDGLSK3	46469.7	45389.9	47436.4
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	GAVLPQEISQVTESHK	GAVLPQEISQVTESHK	3	GAVLPQEISQVTESHK3	51001.4	69763.6	51565.1
A0A0G2K931	A0A8I5Y182;A0A0G2K931	A0A0G2K931_RAT	Psat1	Phosphoserine aminotransferase	0	GAVLVCDMSSNFLSRPVDVSK	GAVLVC(UniMod:4)DMSSNFLSRPVDVSK	3	GAVLVC(UniMod:4)DMSSNFLSRPVDVSK3		6524.65	
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	GAVPHSSPNLAEVK	GAVPHSSPNLAEVK	3	GAVPHSSPNLAEVK3	22605.6		15133.2
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	GAVPYVQAFDSLLANPVAEYLK	GAVPYVQAFDSLLANPVAEYLK	3	GAVPYVQAFDSLLANPVAEYLK3	9796.9		
Q9QYP1	Q9QYP1	LRP4_RAT	Lrp4	Low-density lipoprotein receptor-related protein 4	1	GAVQCTCHTGYR	GAVQC(UniMod:4)TC(UniMod:4)HTGYR	2	GAVQC(UniMod:4)TC(UniMod:4)HTGYR2	3061.51		
B5DFC3	B5DFC3	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	1	GAVQFVTQYQHSSGQR	GAVQFVTQYQHSSGQR	3	GAVQFVTQYQHSSGQR3	23620.1	28386.7	26640.8
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	GAVRDDCEQMTGLCSCRPGVAGPK	GAVRDDC(UniMod:4)EQMTGLC(UniMod:4)SC(UniMod:4)RPGVAGPK	4	GAVRDDC(UniMod:4)EQMTGLC(UniMod:4)SC(UniMod:4)RPGVAGPK4	11343.9	6298.81	16318.5
B0BN18	B0BN18	PFD2_RAT	Pfdn2	Prefoldin subunit 2	1	GAVSAEQVIAGFNR	GAVSAEQVIAGFNR	2	GAVSAEQVIAGFNR2	68950.6	76047.2	73207.5
B0BN18	B0BN18	PFD2_RAT	Pfdn2	Prefoldin subunit 2	1	GAVSAEQVIAGFNR	GAVSAEQVIAGFNR	3	GAVSAEQVIAGFNR3	23035.3	33014.8	13385.4
P38062	P38062;A0A8I6APQ8	MAP2_RAT	Metap2	Methionine aminopeptidase 2	0	GAVSAGQQELDK	GAVSAGQQELDK	2	GAVSAGQQELDK2	3052.45		
P38062	P38062;A0A8I6APQ8	MAP2_RAT	Metap2	Methionine aminopeptidase 2	0	GAVSAGQQELDKESGTSVDEVAK	GAVSAGQQELDKESGTSVDEVAK	3	GAVSAGQQELDKESGTSVDEVAK3	49042.9	55981.1	41838.8
D4A3L3	D4A3L3	D4A3L3_RAT	Megf9	Multiple EGF-like-domains 9	1	GAVSILCNSSGNCQCK	GAVSILC(UniMod:4)NSSGNC(UniMod:4)QC(UniMod:4)K	2	GAVSILC(UniMod:4)NSSGNC(UniMod:4)QC(UniMod:4)K2	3626.56	1449.16	1860.92
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	GAVSPVGVQPILNK	GAVSPVGVQPILNK	2	GAVSPVGVQPILNK2	1.74171e+06	1.35059e+06	1.41819e+06
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	GAVSPVGVQPILNK	GAVSPVGVQPILNK	3	GAVSPVGVQPILNK3	20718	19025.7	16814.7
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	GAVTGHEECVDALLQHGAK	GAVTGHEEC(UniMod:4)VDALLQHGAK	3	GAVTGHEEC(UniMod:4)VDALLQHGAK3	6189.48	6973.8	5077.76
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	GAVTGHEECVDALLQHGAK	GAVTGHEEC(UniMod:4)VDALLQHGAK	4	GAVTGHEEC(UniMod:4)VDALLQHGAK4	11808	10108.8	11291.2
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	GAVVGIDLGTTNSCVAVMEGK	GAVVGIDLGTTNSC(UniMod:4)VAVMEGK	3	GAVVGIDLGTTNSC(UniMod:4)VAVMEGK3	92199.1	84295.8	81093.9
Q5XIG8	Q5XIG8	STRAP_RAT	Strap	Serine-threonine kinase receptor-associated protein	1	GAVWGATLNK	GAVWGATLNK	2	GAVWGATLNK2	173292	180133	156917
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	GAVWLNINYLALGALHHYGR	GAVWLNINYLALGALHHYGR	4	GAVWLNINYLALGALHHYGR4	4835.43	2985.73	3139.8
A0A8I5ZWP3	A0A8I5ZWP3;Q9QYE7	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	0	GAVYIFHGASR	GAVYIFHGASR	2	GAVYIFHGASR2	42376.4	36884.9	46850.1
A0A8I5ZWP3	A0A8I5ZWP3;Q9QYE7	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	0	GAVYIFHGASR	GAVYIFHGASR	3	GAVYIFHGASR3	225292	217563	233169
P18421	P18421	PSB1_RAT	Psmb1	Proteasome subunit beta type-1	1	GAVYSFDPVGSYQR	GAVYSFDPVGSYQR	2	GAVYSFDPVGSYQR2	3.49054e+06	3.78396e+06	4.22313e+06
P18421	P18421	PSB1_RAT	Psmb1	Proteasome subunit beta type-1	1	GAVYSFDPVGSYQR	GAVYSFDPVGSYQR	3	GAVYSFDPVGSYQR3	80033.7	79477.9	107779
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	GAVYSMVEFNGK	GAVYSMVEFNGK	2	GAVYSMVEFNGK2	12510.7	11790.7	10641.4
Q8K4C0	Q8K4C0	FMO5_RAT	Fmo5	Flavin-containing monooxygenase 5	1	GAWILNR	GAWILNR	2	GAWILNR2	12793.2	12936.7	
D3ZMI0	D3ZMI0	D3ZMI0_RAT	Angptl8	Angiopoietin-like 8	1	GAWLGQAHQEFENLK	GAWLGQAHQEFENLK	3	GAWLGQAHQEFENLK3	116333	73903.3	106453
D3ZMI0	D3ZMI0	D3ZMI0_RAT	Angptl8	Angiopoietin-like 8	1	GAWLGQAHQEFENLKDR	GAWLGQAHQEFENLKDR	3	GAWLGQAHQEFENLKDR3	386029	279699	356653
D3ZMI0	D3ZMI0	D3ZMI0_RAT	Angptl8	Angiopoietin-like 8	1	GAWLGQAHQEFENLKDR	GAWLGQAHQEFENLKDR	4	GAWLGQAHQEFENLKDR4	84021.4	72389.9	94407.2
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	GAWMNKFPVEMTHNHNFR	GAWMNKFPVEMTHNHNFR	3	GAWMNKFPVEMTHNHNFR3	80814.4	83908.3	57684.4
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	GAWMNKFPVEMTHNHNFR	GAWMNKFPVEMTHNHNFR	4	GAWMNKFPVEMTHNHNFR4	36301	35880.3	33374.3
Q05962	A0A8I5Y643;Q05962;A0A8I6A2W7;Q09073	ADT1_RAT	Slc25a4	ADP/ATP translocase 1	0	GAWSNVLR	GAWSNVLR	2	GAWSNVLR2	3.08805e+06	3.34427e+06	3.45276e+06
D3ZJF8	D3ZJF8;F7EZQ4	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	0	GAWVNGLR	GAWVNGLR	2	GAWVNGLR2	1.32814e+06	1.43619e+06	1.35786e+06
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	GAWVNGLRVDLPATVLTSVSVK	GAWVNGLRVDLPATVLTSVSVK	3	GAWVNGLRVDLPATVLTSVSVK3	7702.34	10690.9	8385.27
Q9WUD9	Q9WUD9	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	1	GAYCLSVSDFDNAK	GAYC(UniMod:4)LSVSDFDNAK	2	GAYC(UniMod:4)LSVSDFDNAK2	235073	231681	260886
P02688	P02688	MBP_RAT	Mbp	Myelin basic protein	1	GAYDAQGTLSK	GAYDAQGTLSK	2	GAYDAQGTLSK2	1371.29	1994.74	4503.09
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	GAYEQVIK	GAYEQVIK	2	GAYEQVIK2	90225.9	91477.4	104647
Q4KSH6	Q4KSH6	Q4KSH6_RAT	Map2k4	Dual specificity mitogen-activated protein kinase kinase 4	1	GAYGSVNK	GAYGSVNK	2	GAYGSVNK2	12035.2		
M0R7E7	M0R7E7;Q925D6	M0R7E7_RAT	Map2k3	Mitogen activated protein kinase kinase 3	0	GAYGVVEK	GAYGVVEK	2	GAYGVVEK2	48613.2	60304.3	64370.2
Q5XHY5	Q5XHY5	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	1	GAYIYNTLMEFIR	GAYIYNTLMEFIR	2	GAYIYNTLMEFIR2	3710.9	4164.91	6424.83
Q8R431	Q8R431	MGLL_RAT	Mgll	Monoglyceride lipase	1	GAYLLMESSPSQDK	GAYLLMESSPSQDK	2	GAYLLMESSPSQDK2	49452.9	54470.5	57457.7
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	GAYLNALK	GAYLNALK	2	GAYLNALK2	97415.2	144922	155008
P0C1S9	P0C1S9	DGLB_RAT	Daglb	Diacylglycerol lipase-beta	1	GAYPQVR	GAYPQVR	2	GAYPQVR2	110972	105299	93077.5
Q62844	Q62844;F1LM93;Q6P6U0	FYN_RAT	Fyn	Tyrosine-protein kinase Fyn	0	GAYSLSIR	GAYSLSIR	2	GAYSLSIR2	80498.9	64841	85132.8
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	GAYSVGPLHSDLEYTVTSQK	GAYSVGPLHSDLEYTVTSQK	3	GAYSVGPLHSDLEYTVTSQK3	34923.8	19009	31136.7
Q6AY57	Q6AY57	WIPI2_RAT	Wipi2	WD repeat domain phosphoinositide-interacting protein 2	1	GAYVPSSPTR	GAYVPSSPTR	2	GAYVPSSPTR2	25482.3	33517.4	30376.5
P08649	P08649	CO4_RAT	C4	Complement C4	1	GCAEQTMIYLAPTLTASHYLDR	GC(UniMod:4)AEQTMIYLAPTLTASHYLDR	3	GC(UniMod:4)AEQTMIYLAPTLTASHYLDR3	160036	198646	166796
P08649	P08649	CO4_RAT	C4	Complement C4	1	GCAEQTMIYLAPTLTASHYLDR	GC(UniMod:4)AEQTMIYLAPTLTASHYLDR	4	GC(UniMod:4)AEQTMIYLAPTLTASHYLDR4	29966.6	41598.5	27358.9
P08649	P08649	CO4_RAT	C4	Complement C4	1	GCAEQTMIYLAPTLTASHYLDRTEQWSK	GC(UniMod:4)AEQTMIYLAPTLTASHYLDRTEQWSK	4	GC(UniMod:4)AEQTMIYLAPTLTASHYLDRTEQWSK4	61739.2	65724.8	72172.7
Q792H5	Q792H5	CELF2_RAT	Celf2	CUGBP Elav-like family member 2	1	GCAFVTFSTR	GC(UniMod:4)AFVTFSTR	2	GC(UniMod:4)AFVTFSTR2	18608.8	19792.4	17962.1
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	GCAGVITLNRPK	GC(UniMod:4)AGVITLNRPK	2	GC(UniMod:4)AGVITLNRPK2	3933.62	1937.99	4844.17
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	GCAGVITLNRPK	GC(UniMod:4)AGVITLNRPK	3	GC(UniMod:4)AGVITLNRPK3	29163.6	25122.1	44810.8
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	GCAIHQAYNR	GC(UniMod:4)AIHQAYNR	2	GC(UniMod:4)AIHQAYNR2	25131	25525.8	13694.5
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	GCAIHQAYNR	GC(UniMod:4)AIHQAYNR	3	GC(UniMod:4)AIHQAYNR3		107567	
O88600	O88600;Q66HA8	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	0	GCALQCAILSPAFK	GC(UniMod:4)ALQC(UniMod:4)AILSPAFK	2	GC(UniMod:4)ALQC(UniMod:4)AILSPAFK2	333427	409267	406047
O88600	O88600;Q66HA8	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	0	GCALQCAILSPAFK	GC(UniMod:4)ALQC(UniMod:4)AILSPAFK	3	GC(UniMod:4)ALQC(UniMod:4)AILSPAFK3	29921.5	43033.8	43448.2
P10760	P10760	SAHH_RAT	Ahcy	Adenosylhomocysteinase	1	GCAQALR	GC(UniMod:4)AQALR	2	GC(UniMod:4)AQALR2	7978.2	12403.3	
Q5BK26	Q5BK26	PLPL7_RAT	Pnpla7	Patatin-like phospholipase domain-containing protein 7	1	GCAQVGILR	GC(UniMod:4)AQVGILR	2	GC(UniMod:4)AQVGILR2	1182.29	2653.61	5738.9
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	GCAYPAPYLDEYGETDPGLK	GC(UniMod:4)AYPAPYLDEYGETDPGLK	3	GC(UniMod:4)AYPAPYLDEYGETDPGLK3	9507.2	15521.5	9331.93
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	GCAYPAPYLDEYGETDPGLKR	GC(UniMod:4)AYPAPYLDEYGETDPGLKR	3	GC(UniMod:4)AYPAPYLDEYGETDPGLKR3	14099.7	18619.9	12144.3
B5DFN2	D3ZWL6;B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	0	GCCAALK	GC(UniMod:4)C(UniMod:4)AALK	2	GC(UniMod:4)C(UniMod:4)AALK2		63640.9	
Q792H5	Q792H5;Q4QQT3	CELF2_RAT	Celf2	CUGBP Elav-like family member 2	0	GCCFVTFYTR	GC(UniMod:4)C(UniMod:4)FVTFYTR	2	GC(UniMod:4)C(UniMod:4)FVTFYTR2	12445.3	21765.3	12623.7
Q923V8	Q923V8	SEP15_RAT	Selenof	Selenoprotein F	1	GCCQEEAQFETK	GC(UniMod:4)C(UniMod:4)QEEAQFETK	2	GC(UniMod:4)C(UniMod:4)QEEAQFETK2	32578.7	29295	25163
Q923V8	Q923V8	SEP15_RAT	Selenof	Selenoprotein F	1	GCCQEEAQFETKK	GC(UniMod:4)C(UniMod:4)QEEAQFETKK	3	GC(UniMod:4)C(UniMod:4)QEEAQFETKK3	30520.5	40737.6	36283
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	GCDLLQEVSVTIR	GC(UniMod:4)DLLQEVSVTIR	2	GC(UniMod:4)DLLQEVSVTIR2	6088.76	2919.43	3184.46
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	GCDPLVKPVGR	GC(UniMod:4)DPLVKPVGR	2	GC(UniMod:4)DPLVKPVGR2	77071.1	71821.2	55251.3
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	GCDPLVKPVGR	GC(UniMod:4)DPLVKPVGR	3	GC(UniMod:4)DPLVKPVGR3	888013	1.02606e+06	1.0147e+06
A0A8I6ANR6	A0A8I6ANR6	A0A8I6ANR6_RAT	Chuk	IkappaB kinase	1	GCDSYMVYLFDK	GC(UniMod:4)DSYMVYLFDK	2	GC(UniMod:4)DSYMVYLFDK2	4453.72	3274.76	8050.44
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	GCDVLDTTR	GC(UniMod:4)DVLDTTR	2	GC(UniMod:4)DVLDTTR2	9582.04	7494.73	12864.6
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	GCDVVVIPAGVPR	GC(UniMod:4)DVVVIPAGVPR	2	GC(UniMod:4)DVVVIPAGVPR2	1.04083e+06	973704	1.07506e+06
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	GCDVVVIPAGVPR	GC(UniMod:4)DVVVIPAGVPR	3	GC(UniMod:4)DVVVIPAGVPR3	40866.7	40010.6	63682.5
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	GCEECFCSGVSDR	GC(UniMod:4)EEC(UniMod:4)FC(UniMod:4)SGVSDR	2	GC(UniMod:4)EEC(UniMod:4)FC(UniMod:4)SGVSDR2	11676.1	6140.56	9513.33
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	GCEEDKNLPSGYGYRPASR	GC(UniMod:4)EEDKNLPSGYGYRPASR	4	GC(UniMod:4)EEDKNLPSGYGYRPASR4	13741.3	14078.4	10393.9
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GCEGVTHVCDPNVK	GC(UniMod:4)EGVTHVC(UniMod:4)DPNVK	2	GC(UniMod:4)EGVTHVC(UniMod:4)DPNVK2	18316	17100.9	22058.3
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GCEGVTHVCDPNVK	GC(UniMod:4)EGVTHVC(UniMod:4)DPNVK	3	GC(UniMod:4)EGVTHVC(UniMod:4)DPNVK3	205757	244637	227836
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	GCEIDLR	GC(UniMod:4)EIDLR	2	GC(UniMod:4)EIDLR2	11494.3	10700.7	11102.1
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	GCEVTFEWK	GC(UniMod:4)EVTFEWK	2	GC(UniMod:4)EVTFEWK2		12170.6	
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	GCEVVPDVNVSGQK	GC(UniMod:4)EVVPDVNVSGQK	2	GC(UniMod:4)EVVPDVNVSGQK2	1.82633e+06	1.69083e+06	1.8202e+06
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	GCEVVPDVNVSGQK	GC(UniMod:4)EVVPDVNVSGQK	3	GC(UniMod:4)EVVPDVNVSGQK3	27121.4	27003.7	25897.3
P62909	P62909	RS3_RAT	Rps3	Small ribosomal subunit protein uS3	1	GCEVVVSGK	GC(UniMod:4)EVVVSGK	2	GC(UniMod:4)EVVVSGK2	37185.9	36315.3	43728.1
D4AAT1	D4AAT1	D4AAT1_RAT	Adamts8	ADAM metallopeptidase with thrombospondin type 1 motif, 8	1	GCFFSGTVNGER	GC(UniMod:4)FFSGTVNGER	2	GC(UniMod:4)FFSGTVNGER2	11047.6	6899.87	7085.68
D3ZIK0	D3ZIK0	D3ZIK0_RAT	Glce	heparosan-N-sulfate-glucuronate 5-epimerase	1	GCFMASVADK	GC(UniMod:4)FMASVADK	2	GC(UniMod:4)FMASVADK2		3238.19	3285.28
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	GCFSQLVK	GC(UniMod:4)FSQLVK	2	GC(UniMod:4)FSQLVK2	14668	16219.5	17424.3
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	GCGKPISEEGATLGEGSK	GC(UniMod:4)GKPISEEGATLGEGSK	3	GC(UniMod:4)GKPISEEGATLGEGSK3		2087.9	8055.6
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	GCGLNTK	GC(UniMod:4)GLNTK	1	GC(UniMod:4)GLNTK1		866.935	2237.66
Q920J4	Q920J4	TXNL1_RAT	Txnl1	Thioredoxin-like protein 1	1	GCGPCLR	GC(UniMod:4)GPC(UniMod:4)LR	2	GC(UniMod:4)GPC(UniMod:4)LR2	350923	296363	294277
D3ZW59	D3ZW59	D3ZW59_RAT	Itgb1bp2	Integrin subunit beta 1 binding protein 2	1	GCGQHFDPNTNLPDSCR	GC(UniMod:4)GQHFDPNTNLPDSC(UniMod:4)R	3	GC(UniMod:4)GQHFDPNTNLPDSC(UniMod:4)R3	7333.77	11794	
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	GCGYGCQLHHVVYCFMIAYGTQR	GC(UniMod:4)GYGC(UniMod:4)QLHHVVYC(UniMod:4)FMIAYGTQR	4	GC(UniMod:4)GYGC(UniMod:4)QLHHVVYC(UniMod:4)FMIAYGTQR4	6800.3		8433.65
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	GCGYYGNPAWQGFCSK	GC(UniMod:4)GYYGNPAWQGFC(UniMod:4)SK	2	GC(UniMod:4)GYYGNPAWQGFC(UniMod:4)SK2	7361.47	11117.8	
M0RD40	M0RD40	M0RD40_RAT	Sik3	non-specific serine/threonine protein kinase	1	GCHDSPLLLCTSGPGDPEPLLGTVSQAR	GC(UniMod:4)HDSPLLLC(UniMod:4)TSGPGDPEPLLGTVSQAR	3	GC(UniMod:4)HDSPLLLC(UniMod:4)TSGPGDPEPLLGTVSQAR3	6983.17	4902.97	5743.99
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	GCHLLVATPGR	GC(UniMod:4)HLLVATPGR	2	GC(UniMod:4)HLLVATPGR2	10094.7	11733.4	13811.6
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	GCHLLVATPGR	GC(UniMod:4)HLLVATPGR	3	GC(UniMod:4)HLLVATPGR3	32020.3	43230.6	42807.2
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GCHVNECLSR	GC(UniMod:4)HVNEC(UniMod:4)LSR	2	GC(UniMod:4)HVNEC(UniMod:4)LSR2	44829	41339.8	37385.6
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GCHVNECLSR	GC(UniMod:4)HVNEC(UniMod:4)LSR	3	GC(UniMod:4)HVNEC(UniMod:4)LSR3	322773	424016	396789
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	GCIEAFDDSGK	GC(UniMod:4)IEAFDDSGK	2	GC(UniMod:4)IEAFDDSGK2	123492	174985	111980
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	GCILTLVER	GC(UniMod:4)ILTLVER	2	GC(UniMod:4)ILTLVER2	113360	164311	110639
P25236	P25236	SEPP1_RAT	Selenop	Selenoprotein P	1	GCINQLLCK	GC(UniMod:4)INQLLC(UniMod:4)K	2	GC(UniMod:4)INQLLC(UniMod:4)K2	248278	203782	226625
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	GCIPCNCNSFGSK	GC(UniMod:4)IPC(UniMod:4)NC(UniMod:4)NSFGSK	2	GC(UniMod:4)IPC(UniMod:4)NC(UniMod:4)NSFGSK2	53321.9	64549.3	77083.9
P97700	P97700	M2OM_RAT	Slc25a11	Mitochondrial 2-oxoglutarate/malate carrier protein	1	GCIPTMAR	GC(UniMod:4)IPTMAR	2	GC(UniMod:4)IPTMAR2	185172	192775	221196
D4A0Z1	D4A0Z1	D4A0Z1_RAT	Tspan14	Tetraspanin	1	GCIQALEGWLPR	GC(UniMod:4)IQALEGWLPR	2	GC(UniMod:4)IQALEGWLPR2	12332.9	11459.6	11397
D4A7Z0	D4A7Z0	D4A7Z0_RAT	Wdtc1	WD and tetratricopeptide repeats 1	1	GCISPQVELPPYLER	GC(UniMod:4)ISPQVELPPYLER	2	GC(UniMod:4)ISPQVELPPYLER2	22072.6	35716.4	
P16617	P16617	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	1	GCITIIGGGDTATCCAK	GC(UniMod:4)ITIIGGGDTATC(UniMod:4)C(UniMod:4)AK	2	GC(UniMod:4)ITIIGGGDTATC(UniMod:4)C(UniMod:4)AK2	134064	117144	137303
P16617	P16617	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	1	GCITIIGGGDTATCCAK	GC(UniMod:4)ITIIGGGDTATC(UniMod:4)C(UniMod:4)AK	3	GC(UniMod:4)ITIIGGGDTATC(UniMod:4)C(UniMod:4)AK3	8401.5	3385.18	4100.72
P62755	P62755	RS6_RAT	Rps6	Small ribosomal subunit protein eS6	1	GCIVDANLSVLNLVIVK	GC(UniMod:4)IVDANLSVLNLVIVK	2	GC(UniMod:4)IVDANLSVLNLVIVK2	4698.18	2739.18	2462.13
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	GCKEICCPVPDPK	GC(UniMod:4)KEIC(UniMod:4)C(UniMod:4)PVPDPK	2	GC(UniMod:4)KEIC(UniMod:4)C(UniMod:4)PVPDPK2	2300.75	2124.83	1012.85
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	GCKEICCPVPDPK	GC(UniMod:4)KEIC(UniMod:4)C(UniMod:4)PVPDPK	3	GC(UniMod:4)KEIC(UniMod:4)C(UniMod:4)PVPDPK3	45898.9	66745.3	52134.2
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	GCKEICCPVPDPKSVR	GC(UniMod:4)KEIC(UniMod:4)C(UniMod:4)PVPDPKSVR	4	GC(UniMod:4)KEIC(UniMod:4)C(UniMod:4)PVPDPKSVR4	3698.7	6547.23	10772.4
Q5XHY5	Q5XHY5;Q68FW7	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	0	GCLDFLR	GC(UniMod:4)LDFLR	2	GC(UniMod:4)LDFLR2	136796	133420	106448
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	GCLEAGIK	GC(UniMod:4)LEAGIK	1	GC(UniMod:4)LEAGIK1	3823.16	4352.23	1374.42
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	GCLEAGIK	GC(UniMod:4)LEAGIK	2	GC(UniMod:4)LEAGIK2	227653	255390	262629
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	GCLELIK	GC(UniMod:4)LELIK	2	GC(UniMod:4)LELIK2	43622.2	39513.5	43712.9
Q9QZH7	Q9QZH7	FXL20_RAT	Fbxl20	F-box/LRR-repeat protein 20	1	GCLGVGDNALR	GC(UniMod:4)LGVGDNALR	2	GC(UniMod:4)LGVGDNALR2	13157	5951.51	13628
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	GCLHSAILNGR	GC(UniMod:4)LHSAILNGR	2	GC(UniMod:4)LHSAILNGR2	6001.55	4274.19	2486.01
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	GCLHSAILNGR	GC(UniMod:4)LHSAILNGR	3	GC(UniMod:4)LHSAILNGR3	73403.4	73379.4	70747.5
Q3B7D2	Q3B7D2	SPTC2_RAT	Sptlc2	Serine palmitoyltransferase 2	1	GCLILSDELNHASLVLGAR	GC(UniMod:4)LILSDELNHASLVLGAR	3	GC(UniMod:4)LILSDELNHASLVLGAR3	7064.58		3378.06
A0A0G2K543	A0A0G2K543	A0A0G2K543_RAT	C2cd5	C2 calcium-dependent domain containing 5	1	GCLIQAR	GC(UniMod:4)LIQAR	2	GC(UniMod:4)LIQAR2	31487.4	39843.4	40386
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	GCLLYGPPGTGK	GC(UniMod:4)LLYGPPGTGK	2	GC(UniMod:4)LLYGPPGTGK2	153036	135688	151474
A0A8I5ZMG6	A0A8I5ZMG6	A0A8I5ZMG6_RAT	Ppp2r5e	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	GCLTEQTYPEVVR	GC(UniMod:4)LTEQTYPEVVR	2	GC(UniMod:4)LTEQTYPEVVR2	6826.03	9602.64	14857
Q99PD4	Q99PD4	ARC1A_RAT	Arpc1a	Actin-related protein 2/3 complex subunit 1A	1	GCLTFVSK	GC(UniMod:4)LTFVSK	2	GC(UniMod:4)LTFVSK2	54636.4	75356.6	70862.6
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	GCMDSIYLNGQELPLNNKPR	GC(UniMod:4)MDSIYLNGQELPLNNKPR	3	GC(UniMod:4)MDSIYLNGQELPLNNKPR3	13408.7	6602.62	9186.04
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	GCMTLEVNGK	GC(UniMod:4)MTLEVNGK	2	GC(UniMod:4)MTLEVNGK2		20343.8	12111.7
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	GCPADDIMDPK	GC(UniMod:4)PADDIMDPK	2	GC(UniMod:4)PADDIMDPK2	287742	236783	297249
A0A8I5ZU99	A0A8I5ZU99	A0A8I5ZU99_RAT	Ppm1l	Protein phosphatase, Mg2+/Mn2+ dependent, 1L	1	GCPDNITVMVVK	GC(UniMod:4)PDNITVMVVK	2	GC(UniMod:4)PDNITVMVVK2	20177.9	17990.9	17244.4
D3ZXI3	D3ZXI3	D3ZXI3_RAT	Notum	NOTUM, palmitoleoyl-protein carboxylesterase	1	GCPFHLVDSCPWPHCNPSCPTIR	GC(UniMod:4)PFHLVDSC(UniMod:4)PWPHC(UniMod:4)NPSC(UniMod:4)PTIR	4	GC(UniMod:4)PFHLVDSC(UniMod:4)PWPHC(UniMod:4)NPSC(UniMod:4)PTIR4	11830.1	3765.98	6014.3
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	GCPPVFNTLR	GC(UniMod:4)PPVFNTLR	2	GC(UniMod:4)PPVFNTLR2	155133	152164	132103
A0A8I6ATM7	A0A8I6ATM7	A0A8I6ATM7_RAT	Gpn1	GPN-loop GTPase	1	GCPPYVINLDPAVHEVPFPANIDIR	GC(UniMod:4)PPYVINLDPAVHEVPFPANIDIR	3	GC(UniMod:4)PPYVINLDPAVHEVPFPANIDIR3	14487.9	6959.32	10465.7
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	GCQIYLENFK	GC(UniMod:4)QIYLENFK	2	GC(UniMod:4)QIYLENFK2	14173.5	21542.5	26848.4
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	GCQLCPPYGSEGFR	GC(UniMod:4)QLC(UniMod:4)PPYGSEGFR	2	GC(UniMod:4)QLC(UniMod:4)PPYGSEGFR2	71403.2	66279.2	67177
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	GCQLIATGTLR	GC(UniMod:4)QLIATGTLR	2	GC(UniMod:4)QLIATGTLR2	82498.1	93856.5	88090
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	GCQLIATGTLRK	GC(UniMod:4)QLIATGTLRK	3	GC(UniMod:4)QLIATGTLRK3	1970.29	5758.12	4978.21
Q497B0	Q497B0	NIT2_RAT	Nit2	Omega-amidase NIT2	1	GCQLLVYPGAFNMTTGPAHWELLQR	GC(UniMod:4)QLLVYPGAFNMTTGPAHWELLQR	3	GC(UniMod:4)QLLVYPGAFNMTTGPAHWELLQR3	7653.99	9267.98	14182.8
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	GCQTIAAGK	GC(UniMod:4)QTIAAGK	2	GC(UniMod:4)QTIAAGK2	40383.8	47190.1	40339.6
D3ZIK8	D3ZIK8	D3ZIK8_RAT	Fbxo38	F-box protein 38	1	GCQVTSEQIK	GC(UniMod:4)QVTSEQIK	2	GC(UniMod:4)QVTSEQIK2	2636.86	2351.65	3203.35
B5DF45	B5DF45	TRAF6_RAT	Traf6	TNF receptor-associated factor 6	1	GCRPEDPNYEETVK	GC(UniMod:4)RPEDPNYEETVK	3	GC(UniMod:4)RPEDPNYEETVK3	12162.9	9666.44	14527.7
A0A8I5ZTA7	A0A8I5ZTA7	A0A8I5ZTA7_RAT	Lrp8	LDL receptor related protein 8	1	GCSDPACPPR	GC(UniMod:4)SDPAC(UniMod:4)PPR	2	GC(UniMod:4)SDPAC(UniMod:4)PPR2	4495.24	3736	4492.81
D3ZHR2	D3ZHR2	ABCD1_RAT	Abcd1	ATP-binding cassette sub-family D member 1	1	GCSEQQLEAILGIVHLR	GC(UniMod:4)SEQQLEAILGIVHLR	3	GC(UniMod:4)SEQQLEAILGIVHLR3	2058.09		2509.4
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	GCSFLPDPYQK	GC(UniMod:4)SFLPDPYQK	2	GC(UniMod:4)SFLPDPYQK2	17654.9	17593.3	
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	GCSLENVYTVSFPK	GC(UniMod:4)SLENVYTVSFPK	2	GC(UniMod:4)SLENVYTVSFPK2	5114.32	1958.7	4141.8
D3ZQC1	D3ZQC1	D3ZQC1_RAT	B3galt6	Hexosyltransferase	1	GCSNQYLVTHK	GC(UniMod:4)SNQYLVTHK	3	GC(UniMod:4)SNQYLVTHK3	9292.89	13781.7	12974.1
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	GCSTTLGGSSFFEK	GC(UniMod:4)STTLGGSSFFEK	2	GC(UniMod:4)STTLGGSSFFEK2	11767.8	13825.2	186139
P27952	A0A0G2K8H4;A0A0U1RVI9;D3ZIY7;D3ZT78;D3ZAS1;P27952;A0A8J8XHT4;A0A8I5ZSA5;A0A8I6A3D4	RS2_RAT	Rps2	Small ribosomal subunit protein uS5	0	GCTATLGNFAK	GC(UniMod:4)TATLGNFAK	2	GC(UniMod:4)TATLGNFAK2	30291	40211.5	38504.9
D4A929	D4A929	WDR81_RAT	Wdr81	WD repeat-containing protein 81	1	GCTEGQLPEATFSDGQR	GC(UniMod:4)TEGQLPEATFSDGQR	2	GC(UniMod:4)TEGQLPEATFSDGQR2	9080.32	5487.83	3838.15
Q63621	Q63621	IL1AP_RAT	Il1rap	Interleukin-1 receptor accessory protein	1	GCTEIVNFHNVQPK	GC(UniMod:4)TEIVNFHNVQPK	2	GC(UniMod:4)TEIVNFHNVQPK2	3118.52		3482.28
Q63621	Q63621	IL1AP_RAT	Il1rap	Interleukin-1 receptor accessory protein	1	GCTEIVNFHNVQPK	GC(UniMod:4)TEIVNFHNVQPK	3	GC(UniMod:4)TEIVNFHNVQPK3	54012.9	60333.6	58109.6
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	GCTFLVGLIQK	GC(UniMod:4)TFLVGLIQK	2	GC(UniMod:4)TFLVGLIQK2	930250	972891	894836
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	GCTFLVGLIQK	GC(UniMod:4)TFLVGLIQK	3	GC(UniMod:4)TFLVGLIQK3	42128.5	62802.4	40780.6
A0A0G2K3D9	A0A0G2K3D9	A0A0G2K3D9_RAT	Tmem132b	Transmembrane protein 132B	1	GCTLQYQHALVR	GC(UniMod:4)TLQYQHALVR	3	GC(UniMod:4)TLQYQHALVR3	4834.33	3374.75	
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	GCTPLHYAATSDTDGK	GC(UniMod:4)TPLHYAATSDTDGK	3	GC(UniMod:4)TPLHYAATSDTDGK3	17793.3	12622.5	23766.2
Q9QZH7	F1M768;Q9QZH7	FXL20_RAT	Fbxl20	F-box/LRR-repeat protein 20	0	GCTQLEDEALK	GC(UniMod:4)TQLEDEALK	2	GC(UniMod:4)TQLEDEALK2	4247.95	645.324	
A0A8I6AEI1	A0A8I6AEI1	A0A8I6AEI1_RAT	Hps1	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1	1	GCTTLLFQEGDFR	GC(UniMod:4)TTLLFQEGDFR	2	GC(UniMod:4)TTLLFQEGDFR2	18202	8202.73	29439.4
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	GCTVEELLR	GC(UniMod:4)TVEELLR	2	GC(UniMod:4)TVEELLR2	403150	365420	370292
D3ZW59	D3ZW59	D3ZW59_RAT	Itgb1bp2	Integrin subunit beta 1 binding protein 2	1	GCTVGPHCAEK	GC(UniMod:4)TVGPHC(UniMod:4)AEK	3	GC(UniMod:4)TVGPHC(UniMod:4)AEK3			3774.83
B5DFH4	B5DFH4;A0A0G2K0L0	B5DFH4_RAT	Papss2	3'-phosphoadenosine 5'-phosphosulfate synthase 2	0	GCTVWLTGLSGAGK	GC(UniMod:4)TVWLTGLSGAGK	2	GC(UniMod:4)TVWLTGLSGAGK2	2651.47		
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	GCVAAFLDVVIGGR	GC(UniMod:4)VAAFLDVVIGGR	2	GC(UniMod:4)VAAFLDVVIGGR2	3935.74	8186.26	7271.34
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	GCVDNMTLTVSR	GC(UniMod:4)VDNMTLTVSR	2	GC(UniMod:4)VDNMTLTVSR2	291147	242442	262868
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	GCVDNMTLTVSR	GC(UniMod:4)VDNMTLTVSR	3	GC(UniMod:4)VDNMTLTVSR3	14572.9	9622.51	5767.79
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	GCVGEVSVNGK	GC(UniMod:4)VGEVSVNGK	2	GC(UniMod:4)VGEVSVNGK2	10089.3	8863.99	15868.8
F7EZQ4	F7EZQ4	F7EZQ4_RAT	Fcgbpl1	Fc fragment of IgG binding protein-like 1	1	GCVLDLCLGGQVK	GC(UniMod:4)VLDLC(UniMod:4)LGGQVK	2	GC(UniMod:4)VLDLC(UniMod:4)LGGQVK2	24139.4		19122.3
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	GCVLDVCLGGGNK	GC(UniMod:4)VLDVC(UniMod:4)LGGGNK	2	GC(UniMod:4)VLDVC(UniMod:4)LGGGNK2	841441	629618	684596
Q9Z0J5	Q9Z0J5	TRXR2_RAT	Txnrd2	Thioredoxin reductase 2, mitochondrial	1	GCVPSLIR	GC(UniMod:4)VPSLIR	2	GC(UniMod:4)VPSLIR2	28662.8	28530.2	36536.7
A0A8I6G251	A0A8I6G251	A0A8I6G251_RAT	Tnpo3	Transportin 3	1	GCVQTLVEK	GC(UniMod:4)VQTLVEK	2	GC(UniMod:4)VQTLVEK2	18254.8	20896.2	13473.3
P07154	P07154	CATL1_RAT	Ctsl	Procathepsin L	1	GCVTPVK	GC(UniMod:4)VTPVK	2	GC(UniMod:4)VTPVK2	9492.34		6209.04
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	GCVVTSVESNPDGK	GC(UniMod:4)VVTSVESNPDGK	2	GC(UniMod:4)VVTSVESNPDGK2	36178.6	29953.1	3.09675e+06
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	GCVVTSVESNPDGK	GC(UniMod:4)VVTSVESNPDGK	3	GC(UniMod:4)VVTSVESNPDGK3	20746.4	29783.6	37712.9
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	GCVVTSVESNPDGKK	GC(UniMod:4)VVTSVESNPDGKK	2	GC(UniMod:4)VVTSVESNPDGKK2	336182	364740	290270
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	GCVVTSVESNPDGKK	GC(UniMod:4)VVTSVESNPDGKK	3	GC(UniMod:4)VVTSVESNPDGKK3	71918.8	74953.2	68049.8
D4A0T9	D4A0T9	D4A0T9_RAT	Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	1	GCWAGPCAGQK	GC(UniMod:4)WAGPC(UniMod:4)AGQK	2	GC(UniMod:4)WAGPC(UniMod:4)AGQK2	9180.19	14181.3	13053.1
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	GCWDSIHVVEVQEK	GC(UniMod:4)WDSIHVVEVQEK	2	GC(UniMod:4)WDSIHVVEVQEK2	77977.7	76607.8	64682.5
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	GCWDSIHVVEVQEK	GC(UniMod:4)WDSIHVVEVQEK	3	GC(UniMod:4)WDSIHVVEVQEK3	591113	537881	581334
D4A731	D4A731	D4A731_RAT	Ankib1	RBR-type E3 ubiquitin transferase	1	GCWESFLNLK	GC(UniMod:4)WESFLNLK	2	GC(UniMod:4)WESFLNLK2	9968.25	3204.58	10137.5
A0A0G2K2G7	A0A0G2K2G7	A0A0G2K2G7_RAT	Anks1a	Ankyrin repeat and sterile alpha motif domain containing 1A	1	GCYPLHLAAWK	GC(UniMod:4)YPLHLAAWK	3	GC(UniMod:4)YPLHLAAWK3	10783.2		4915.74
D3ZMV1	D3ZMV1	D3ZMV1_RAT	Sla2	Src-like-adaptor 2	1	GCYSLSIR	GC(UniMod:4)YSLSIR	2	GC(UniMod:4)YSLSIR2	12313.9	16483.5	12078.5
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	GDACDDDDDNDGVPDSR	GDAC(UniMod:4)DDDDDNDGVPDSR	2	GDAC(UniMod:4)DDDDDNDGVPDSR2	1.47855e+06	1.412e+06	1.37538e+06
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	GDACDDDDDNDGVPDSR	GDAC(UniMod:4)DDDDDNDGVPDSR	3	GDAC(UniMod:4)DDDDDNDGVPDSR3	126038	127376	122761
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	GDACDDDDDNDGVPDSRDNCR	GDAC(UniMod:4)DDDDDNDGVPDSRDNC(UniMod:4)R	3	GDAC(UniMod:4)DDDDDNDGVPDSRDNC(UniMod:4)R3		23877.7	
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	GDACDDDMDGDGIK	GDAC(UniMod:4)DDDMDGDGIK	2	GDAC(UniMod:4)DDDMDGDGIK2	21889.3	30539.6	19241.8
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	GDACDDDMDGDGIK	GDAC(UniMod:4)DDDMDGDGIK	3	GDAC(UniMod:4)DDDMDGDGIK3	10644.3	14075.7	14815.9
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	GDACDHDDDNDGIPDDR	GDAC(UniMod:4)DHDDDNDGIPDDR	2	GDAC(UniMod:4)DHDDDNDGIPDDR2	39742.2	34479.1	40669.7
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	GDACDHDDDNDGIPDDR	GDAC(UniMod:4)DHDDDNDGIPDDR	3	GDAC(UniMod:4)DHDDDNDGIPDDR3	218288	147073	170960
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	GDACDHDDDNDGIPDDRDNCR	GDAC(UniMod:4)DHDDDNDGIPDDRDNC(UniMod:4)R	3	GDAC(UniMod:4)DHDDDNDGIPDDRDNC(UniMod:4)R3	40359.2	25889.1	2.35415e+06
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	GDACDHDDDNDGIPDDRDNCR	GDAC(UniMod:4)DHDDDNDGIPDDRDNC(UniMod:4)R	4	GDAC(UniMod:4)DHDDDNDGIPDDRDNC(UniMod:4)R4	127067	169863	119284
D4A2G6	D4A2G6	D4A2G6_RAT	Thbs2	Thrombospondin 2	1	GDACDSDDDNDGVPDDRDNCR	GDAC(UniMod:4)DSDDDNDGVPDDRDNC(UniMod:4)R	3	GDAC(UniMod:4)DSDDDNDGVPDDRDNC(UniMod:4)R3	21039.5		29930.4
P18292	P18292	THRB_RAT	F2	Prothrombin	1	GDACEGDSGGPFVMK	GDAC(UniMod:4)EGDSGGPFVMK	2	GDAC(UniMod:4)EGDSGGPFVMK2	52895.1	43954.9	52581.6
P18292	P18292	THRB_RAT	F2	Prothrombin	1	GDACEGDSGGPFVMK	GDAC(UniMod:4)EGDSGGPFVMK	3	GDAC(UniMod:4)EGDSGGPFVMK3	129159	96408.2	136055
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	GDADNHASMK	GDADNHASMK	2	GDADNHASMK2			5882.33
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	GDAEEGDEYDDPFAGPPDTISLASER	GDAEEGDEYDDPFAGPPDTISLASER	3	GDAEEGDEYDDPFAGPPDTISLASER3	143614	140550	186568
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	GDAEEMAQR	GDAEEMAQR	2	GDAEEMAQR2	27559.6	31389	38837.5
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	GDAEGAMK	GDAEGAMK	1	GDAEGAMK1			1538.1
Q4FZX7	Q4FZX7	SRPRB_RAT	Srprb	Signal recognition particle receptor subunit beta	1	GDAGSADVQDLEK	GDAGSADVQDLEK	2	GDAGSADVQDLEK2	51215.1	38804.4	31454.1
D4A9I3	D4A9I3	FLOWR_RAT	Cacfd1	Calcium channel flower homolog	1	GDAISYAR	GDAISYAR	2	GDAISYAR2		6380.76	
P09650	P09650	MCPT1_RAT	Mcpt1	Mast cell protease 1	1	GDAKPPAVFTR	GDAKPPAVFTR	3	GDAKPPAVFTR3	41429	40897.1	38621
A0A8I6GKB1	A0A8I6GKB1	A0A8I6GKB1_RAT	Mocs1	Molybdenum cofactor synthesis 1	1	GDALVVAQLAGVQAAK	GDALVVAQLAGVQAAK	2	GDALVVAQLAGVQAAK2	5700.56		
Q6AYD3	Q6AYD3	PA2G4_RAT	Pa2g4	Proliferation-associated protein 2G4	1	GDAMIMEETGK	GDAMIMEETGK	2	GDAMIMEETGK2	34697.2	38036.9	37996.3
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	GDANSEVTVYYQSGTR	GDANSEVTVYYQSGTR	2	GDANSEVTVYYQSGTR2	4760.15	13799.5	9647.41
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	GDAPECFVSPLAR	GDAPEC(UniMod:4)FVSPLAR	2	GDAPEC(UniMod:4)FVSPLAR2	9066.29	7250.9	14434
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	GDAQQVVATR	GDAQQVVATR	2	GDAQQVVATR2	13747.7	9195.93	7848.66
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	GDARPAEIDSLWEISK	GDARPAEIDSLWEISK	2	GDARPAEIDSLWEISK2	8953.79	9670.09	
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	GDARPAEIDSLWEISK	GDARPAEIDSLWEISK	3	GDARPAEIDSLWEISK3	40917.9	46967.4	43178.6
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	GDASGLKR	GDASGLKR	2	GDASGLKR2			8028.99
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	GDAVAFFILPDQGK	GDAVAFFILPDQGK	2	GDAVAFFILPDQGK2	1.43583e+06	1.75278e+06	1.73564e+06
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	GDAVAFFILPDQGK	GDAVAFFILPDQGK	3	GDAVAFFILPDQGK3	56871.5	69258	57450.8
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	GDAVRDVDIIDHHDNTYTVK	GDAVRDVDIIDHHDNTYTVK	3	GDAVRDVDIIDHHDNTYTVK3	5138.61	2368.75	6663.13
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	GDAVRDVDIIDHHDNTYTVK	GDAVRDVDIIDHHDNTYTVK	4	GDAVRDVDIIDHHDNTYTVK4	35948.1	44751.3	49861.3
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	GDAYMTETSIPESELR	GDAYMTETSIPESELR	2	GDAYMTETSIPESELR2	54313.4	37471.6	50845
F7EQF3	F7EQF3	F7EQF3_RAT	Bak1	BCL2-antagonist/killer 1	1	GDCDEALSASEQQVAQDTEEVFR	GDC(UniMod:4)DEALSASEQQVAQDTEEVFR	3	GDC(UniMod:4)DEALSASEQQVAQDTEEVFR3	17495.1	16766.5	23565.8
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	GDCDGVQINNPVTFQVK	GDC(UniMod:4)DGVQINNPVTFQVK	2	GDC(UniMod:4)DGVQINNPVTFQVK2	10100.7	11962.4	8490
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	GDCDGVQINNPVTFQVK	GDC(UniMod:4)DGVQINNPVTFQVK	3	GDC(UniMod:4)DGVQINNPVTFQVK3	5957.72	6504.58	5276.85
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	GDCNSDIHLITR	GDC(UniMod:4)NSDIHLITR	3	GDC(UniMod:4)NSDIHLITR3	11034	8059.03	6897.63
O35547	O35547	ACSL4_RAT	Acsl4	Long-chain-fatty-acid--CoA ligase 4	1	GDCTVLKPTLMAAVPEIMDR	GDC(UniMod:4)TVLKPTLMAAVPEIMDR	3	GDC(UniMod:4)TVLKPTLMAAVPEIMDR3	4734.17	5129.98	
Q68FX1	Q68FX1	MPI_RAT	Mpi	Mannose-6-phosphate isomerase	1	GDCVECMACSDNTVR	GDC(UniMod:4)VEC(UniMod:4)MAC(UniMod:4)SDNTVR	2	GDC(UniMod:4)VEC(UniMod:4)MAC(UniMod:4)SDNTVR2	1442.98	454.599	3431.31
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	GDDCSSECAPGMWGPQCDR	GDDC(UniMod:4)SSEC(UniMod:4)APGMWGPQC(UniMod:4)DR	3	GDDC(UniMod:4)SSEC(UniMod:4)APGMWGPQC(UniMod:4)DR3	48791.7	49167	44420.1
D3ZEF9	D3ZEF9	D3ZEF9_RAT	B3gnt2	Hexosyltransferase	1	GDDDVFVNTHHILNYLNSLSK	GDDDVFVNTHHILNYLNSLSK	3	GDDDVFVNTHHILNYLNSLSK3	10420	5212.94	2844.74
D3ZEF9	D3ZEF9	D3ZEF9_RAT	B3gnt2	Hexosyltransferase	1	GDDDVFVNTHHILNYLNSLSK	GDDDVFVNTHHILNYLNSLSK	4	GDDDVFVNTHHILNYLNSLSK4	7832.59	3038.69	2386.58
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	GDDEFCNIWQSLQGSGK	GDDEFC(UniMod:4)NIWQSLQGSGK	2	GDDEFC(UniMod:4)NIWQSLQGSGK2	8304.61	4674.81	8296.56
Q5U211	Q5U211	SNX3_RAT	Snx3	Sorting nexin-3	1	GDDGIFDDNFIEER	GDDGIFDDNFIEER	2	GDDGIFDDNFIEER2	9290.88	9156.89	5413.48
Q1EHB3	Q1EHB3	ATS7_RAT	Adamts7	A disintegrin and metalloproteinase with thrombospondin motifs 7	1	GDDHPQHHDTAILLTR	GDDHPQHHDTAILLTR	4	GDDHPQHHDTAILLTR4		4040.59	
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	GDDITMVLILPKPEK	GDDITMVLILPKPEK	2	GDDITMVLILPKPEK2	62053.5	41326.9	36330.9
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	GDDITMVLILPKPEK	GDDITMVLILPKPEK	3	GDDITMVLILPKPEK3	321734	253278	226348
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	GDDKEEGPVTEQVK	GDDKEEGPVTEQVK	3	GDDKEEGPVTEQVK3	11047.3	10742.4	15165.6
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	GDDKEEGPVTEQVKK	GDDKEEGPVTEQVKK	3	GDDKEEGPVTEQVKK3	4915.01		6835.82
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	GDDKEEGPVTEQVKK	GDDKEEGPVTEQVKK	4	GDDKEEGPVTEQVKK4	6133.71	9666.3	
A0A8I5ZP70	A0A8I5ZP70	A0A8I5ZP70_RAT	Tom1l2	Target of myb1 like 2 membrane trafficking protein	1	GDDLEEGVTSEEFDK	GDDLEEGVTSEEFDK	2	GDDLEEGVTSEEFDK2	39350.8	45411.6	35639.5
A0A8I5ZQ28;A0A8I6AB39;F7F4Q4	A0A8I6AB39;A0A8I5ZQ28;F7F4Q4	A0A8I5ZQ28_RAT;A0A8I6AB39_RAT;F7F4Q4_RAT	Eif1;Eif1-ps8;Eif1b	Eukaryotic translation initiation factor 1	0	GDDLLPAGTEDYIHIR	GDDLLPAGTEDYIHIR	3	GDDLLPAGTEDYIHIR3	33360.9	24805.3	18728.6
G3V9R8	G3V9R8	HNRPC_RAT	Hnrnpc	Heterogeneous nuclear ribonucleoprotein C	1	GDDLQAIK	GDDLQAIK	2	GDDLQAIK2	10497.9	8470.4	5159.49
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	GDDLSTAILK	GDDLSTAILK	2	GDDLSTAILK2	2.33227e+06	2.08091e+06	2.38405e+06
Q5QE80	Q5QE80	AOXC_RAT	Aox3	Aldehyde oxidase 3	1	GDDMLITGGR	GDDMLITGGR	2	GDDMLITGGR2	8070.28	6744.2	2827.71
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	GDDNTGENNIVQELTK	GDDNTGENNIVQELTK	2	GDDNTGENNIVQELTK2	18188.3	10907	12043.5
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	GDECELLGHNK	GDEC(UniMod:4)ELLGHNK	2	GDEC(UniMod:4)ELLGHNK2	599.84	2068.99	
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	GDECELLGHNK	GDEC(UniMod:4)ELLGHNK	3	GDEC(UniMod:4)ELLGHNK3	12580.5	16507.5	24938.8
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	GDECGLALGR	GDEC(UniMod:4)GLALGR	2	GDEC(UniMod:4)GLALGR2	18819.2	13875.9	16068.4
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	GDECILK	GDEC(UniMod:4)ILK	2	GDEC(UniMod:4)ILK2	4252.08		5420.7
P35565	P35565	CALX_RAT	Canx	Calnexin	1	GDEEEEEEK	GDEEEEEEK	2	GDEEEEEEK2			97401.5
Q5PQN6	Q5PQN6	SPE39_RAT	Vipas39	Spermatogenesis-defective protein 39 homolog	1	GDEEEYWNSSK	GDEEEYWNSSK	2	GDEEEYWNSSK2	3700.3	7135.08	6851.83
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	GDEEGIPAVVIDMSGLR	GDEEGIPAVVIDMSGLR	2	GDEEGIPAVVIDMSGLR2	19579.8	16128.2	15585.1
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	GDEEGIPAVVIDMSGLR	GDEEGIPAVVIDMSGLR	3	GDEEGIPAVVIDMSGLR3	2913.3	5042.54	
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	GDEEIGPCSASLSPEGTGVTR	GDEEIGPC(UniMod:4)SASLSPEGTGVTR	3	GDEEIGPC(UniMod:4)SASLSPEGTGVTR3	7791.13	5892.94	13465.1
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	GDEELAIDVMDR	GDEELAIDVMDR	2	GDEELAIDVMDR2	7761.65	12951.6	
P0C0S7	A0A8I5ZP51;D4AEC0;P0C0S7;A0A8I6ASE8	H2AZ_RAT	H2az1	Histone H2A.Z	0	GDEELDSLIK	GDEELDSLIK	2	GDEELDSLIK2	5557.31	790.677	
D4A9N5	D4A9N5	D4A9N5_RAT	Trim25	Tripartite motif-containing 25	1	GDEFEFLEK	GDEFEFLEK	2	GDEFEFLEK2	11608.8	4620.91	14983.8
D3ZME7	D3ZME7	D3ZME7_RAT	Hscb	HscB mitochondrial iron-sulfur cluster co-chaperone	1	GDEFFCAHCR	GDEFFC(UniMod:4)AHC(UniMod:4)R	3	GDEFFC(UniMod:4)AHC(UniMod:4)R3	2466.89	6218.97	3720.01
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	GDEGCGACGGVQEELGR	GDEGC(UniMod:4)GAC(UniMod:4)GGVQEELGR	2	GDEGC(UniMod:4)GAC(UniMod:4)GGVQEELGR2	56838.3	61679	83846.6
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	GDEGCGACGGVQEELGR	GDEGC(UniMod:4)GAC(UniMod:4)GGVQEELGR	3	GDEGC(UniMod:4)GAC(UniMod:4)GGVQEELGR3	18304.7	25329.9	18082.4
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	GDEGEAGDPGEDNNDVSPR	GDEGEAGDPGEDNNDVSPR	2	GDEGEAGDPGEDNNDVSPR2	8457.36	4893.64	
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	GDEGPPGPEGLR	GDEGPPGPEGLR	2	GDEGPPGPEGLR2	9170.13		6908.29
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	GDEKENITAEALELSLK	GDEKENITAEALELSLK	2	GDEKENITAEALELSLK2	102559	94714.8	87638.6
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	GDEKENITAEALELSLK	GDEKENITAEALELSLK	3	GDEKENITAEALELSLK3	1.60047e+06	1.65638e+06	1.51865e+06
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	GDEKENITAEALELSLK	GDEKENITAEALELSLK	4	GDEKENITAEALELSLK4	4650.42	6192.82	4708.68
Q66H15	Q66H15	RMD3_RAT	Rmdn3	Regulator of microtubule dynamics protein 3	1	GDESAASHLWYAVLCGQLAEHEGISK	GDESAASHLWYAVLC(UniMod:4)GQLAEHEGISK	4	GDESAASHLWYAVLC(UniMod:4)GQLAEHEGISK4	2803.38	2303.14	3509.31
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	GDETFAVLSR	GDETFAVLSR	2	GDETFAVLSR2	31065.2	39337.3	41428.1
B2RYW9	B2RYW9	FAHD2_RAT	Fahd2	Fumarylacetoacetate hydrolase domain-containing protein 2	1	GDEVQCEIEELGVIINK	GDEVQC(UniMod:4)EIEELGVIINK	2	GDEVQC(UniMod:4)EIEELGVIINK2	8682.83	2971.23	
B2RYW9	B2RYW9	FAHD2_RAT	Fahd2	Fumarylacetoacetate hydrolase domain-containing protein 2	1	GDEVQCEIEELGVIINK	GDEVQC(UniMod:4)EIEELGVIINK	3	GDEVQC(UniMod:4)EIEELGVIINK3	7743.67	5158.66	8802.53
P31720	P31720	C1QA_RAT	C1qa	Complement C1q subcomponent subunit A	1	GDEVWIEKDPAK	GDEVWIEKDPAK	2	GDEVWIEKDPAK2	8970.78	4860.15	6982.91
P31720	P31720	C1QA_RAT	C1qa	Complement C1q subcomponent subunit A	1	GDEVWIEKDPAK	GDEVWIEKDPAK	3	GDEVWIEKDPAK3	41198.2	37775.4	41530
B1WC91	B1WC91	B1WC91_RAT	C1qtnf3	C1q and TNF related 3	1	GDEVWLR	GDEVWLR	2	GDEVWLR2	4.23517e+06	4.23241e+06	4.67925e+06
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	GDEYVINGQK	GDEYVINGQK	2	GDEYVINGQK2	2711.58	1839.65	6620.19
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	GDFANANNFDNTFGQVSEDLR	GDFANANNFDNTFGQVSEDLR	3	GDFANANNFDNTFGQVSEDLR3	127461	112195	137490
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	GDFANANNFDNTFGQVSEDLRR	GDFANANNFDNTFGQVSEDLRR	3	GDFANANNFDNTFGQVSEDLRR3	82613.5	86456.4	72418.6
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	GDFANANNFDNTFGQVSEDLRR	GDFANANNFDNTFGQVSEDLRR	4	GDFANANNFDNTFGQVSEDLRR4	359777	399745	394772
P19804	Q05982;P19804;A0A8I6AII3	NDKB_RAT	Nme2	Nucleoside diphosphate kinase B	0	GDFCIQVGR	GDFC(UniMod:4)IQVGR	2	GDFC(UniMod:4)IQVGR2	134873	100874	133153
B2RZ78	B2RZ78	VPS29_RAT	Vps29	Vacuolar protein sorting-associated protein 29	1	GDFDESLNYPEQK	GDFDESLNYPEQK	2	GDFDESLNYPEQK2	57570.2	40860.9	37615.7
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	GDFFMTLR	GDFFMTLR	2	GDFFMTLR2	17058.2	16612.3	12557.3
Q5XIP9	Q5XIP9	TMM43_RAT	Tmem43	Transmembrane protein 43	1	GDFFYHSENPK	GDFFYHSENPK	3	GDFFYHSENPK3	5592.77	8220.82	3699.43
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	GDFIALDLGGSSFR	GDFIALDLGGSSFR	2	GDFIALDLGGSSFR2	99419.8	111063	85483.1
P62994	P62994	GRB2_RAT	Grb2	Growth factor receptor-bound protein 2	1	GDFIHVMDNSDPNWWK	GDFIHVMDNSDPNWWK	3	GDFIHVMDNSDPNWWK3	7608.95	5047.17	4795.98
D3Z9L0	D3Z9L0	D3Z9L0_RAT	Agk	Acylglycerol kinase, mitochondrial	1	GDFIIIGSK	GDFIIIGSK	2	GDFIIIGSK2	23973.3	26216.5	30254.5
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	GDFILVGDLMR	GDFILVGDLMR	2	GDFILVGDLMR2	31188	40123.5	40644.4
D4A5G8	D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	GDFIPGLR	GDFIPGLR	2	GDFIPGLR2	57353.1	46092.9	58442.3
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	GDFLQMVLDAQR	GDFLQMVLDAQR	2	GDFLQMVLDAQR2	14899.4	11765.3	20302.2
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	GDFSPFGNTQGPSR	GDFSPFGNTQGPSR	2	GDFSPFGNTQGPSR2	49977.9	59141.9	63115.1
Q5PQX1	Q5PQX1	TOIP1_RAT	Tor1aip1	Torsin-1A-interacting protein 1	1	GDFTAHENQPSLLPTGCQK	GDFTAHENQPSLLPTGC(UniMod:4)QK	3	GDFTAHENQPSLLPTGC(UniMod:4)QK3	19007.4	11732.6	
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	GDFVSLALHNR	GDFVSLALHNR	2	GDFVSLALHNR2	4891.04	6055.87	8722.45
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	GDFVSLALHNR	GDFVSLALHNR	3	GDFVSLALHNR3	20294	13353.2	13741.3
A0A8I5ZLR7	A0A8I5ZLR7	A0A8I5ZLR7_RAT	Tsr2	Pre-rRNA-processing protein TSR2 homolog	1	GDGAALQEMTSHINQK	GDGAALQEMTSHINQK	3	GDGAALQEMTSHINQK3	11551.3	12141	24344.8
Q63016	Q63016	LAT1_RAT	Slc7a5	Large neutral amino acids transporter small subunit 1	1	GDGADPEGEGVTLQR	GDGADPEGEGVTLQR	2	GDGADPEGEGVTLQR2	9196.78	4934.94	5508.2
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	GDGDPVSVVTVR	GDGDPVSVVTVR	2	GDGDPVSVVTVR2	42192.4	33418.5	42321
Q76LD0	Q76LD0	CRDL1_RAT	Chrdl1	Chordin-like protein 1	1	GDGELSWEHSDADIFR	GDGELSWEHSDADIFR	2	GDGELSWEHSDADIFR2	3749.44	5283.65	5600.01
Q76LD0	Q76LD0	CRDL1_RAT	Chrdl1	Chordin-like protein 1	1	GDGELSWEHSDADIFR	GDGELSWEHSDADIFR	3	GDGELSWEHSDADIFR3	96016.1	124368	97563.3
Q76LD0	Q76LD0	CRDL1_RAT	Chrdl1	Chordin-like protein 1	1	GDGELSWEHSDADIFRQPANR	GDGELSWEHSDADIFRQPANR	4	GDGELSWEHSDADIFRQPANR4	4509.27		
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	GDGLESELVHR	GDGLESELVHR	2	GDGLESELVHR2	2263.47		2348.76
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	GDGLESELVHR	GDGLESELVHR	3	GDGLESELVHR3	39351.9	62905.2	44673.4
D4A565	D4A565	D4A565_RAT	Ndufb5	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial	1	GDGPWYQYPTPEK	GDGPWYQYPTPEK	2	GDGPWYQYPTPEK2	32424.5	29186	32653.7
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	GDGQFFAVSVVCSQTGAR	GDGQFFAVSVVC(UniMod:4)SQTGAR	2	GDGQFFAVSVVC(UniMod:4)SQTGAR2	1956.65	3731.27	2317.37
D3ZHA0	D3ZHA0;A0A8I5ZV49	FLNC_RAT	Flnc	Filamin-C	0	GDGSCDVR	GDGSC(UniMod:4)DVR	2	GDGSC(UniMod:4)DVR2			26754.8
D3ZY71	D3ZY71	D3ZY71_RAT	Triap1	TP53 regulated inhibitor of apoptosis 1	1	GDGSGDPCTDLFK	GDGSGDPC(UniMod:4)TDLFK	2	GDGSGDPC(UniMod:4)TDLFK2	21563.2	15343.9	15258.8
B1WBN7	B1WBN7	B1WBN7_RAT	Fam20c	FAM20C	1	GDGSLLAK	GDGSLLAK	2	GDGSLLAK2	142115	134700	111804
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	GDGTDLQDPAK	GDGTDLQDPAK	2	GDGTDLQDPAK2	395300	235268	211562
Q5U1Z2	Q5U1Z2	TPPC3_RAT	Trappc3	Trafficking protein particle complex subunit 3	1	GDGVTEIR	GDGVTEIR	2	GDGVTEIR2	153149	126102	133688
D4A7U6	D4A7U6	D4A7U6_RAT	Lsm3	U6 snRNA-associated Sm-like protein LSm3	1	GDGVVLVAPPLR	GDGVVLVAPPLR	2	GDGVVLVAPPLR2	65432.5	76567.3	85771.2
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	GDHELLILLEDWGGR	GDHELLILLEDWGGR	2	GDHELLILLEDWGGR2	30667.6	25525.1	19941.1
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	GDHELLILLEDWGGR	GDHELLILLEDWGGR	3	GDHELLILLEDWGGR3	188513	76463.6	130278
P98193	P98193	DMP1_RAT	Dmp1	Dentin matrix acidic phosphoprotein 1	1	GDHEPTSTQDSDDSQDVEFSSR	GDHEPTSTQDSDDSQDVEFSSR	3	GDHEPTSTQDSDDSQDVEFSSR3	8770.47	13613.1	13467.7
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	GDHPIMMGFEPLVNQR	GDHPIMMGFEPLVNQR	3	GDHPIMMGFEPLVNQR3	21852.4	19589.3	27323.4
Q9QWE9	Q9QWE9	GGT5_RAT	Ggt5	Glutathione hydrolase 5 proenzyme	1	GDHQLSHYNLSGVR	GDHQLSHYNLSGVR	3	GDHQLSHYNLSGVR3		8008.4	
Q9QWE9	Q9QWE9	GGT5_RAT	Ggt5	Glutathione hydrolase 5 proenzyme	1	GDHQLSHYNLSGVR	GDHQLSHYNLSGVR	4	GDHQLSHYNLSGVR4	26621.8	27158.3	22924.5
Q5M848	Q5M848	CRCM1_RAT	Orai1	Calcium release-activated calcium channel protein 1	1	GDHSLTPGTHYA	GDHSLTPGTHYA	2	GDHSLTPGTHYA2	15065.7	12029.4	10616.9
Q5M848	Q5M848	CRCM1_RAT	Orai1	Calcium release-activated calcium channel protein 1	1	GDHSLTPGTHYA	GDHSLTPGTHYA	3	GDHSLTPGTHYA3	164004	174338	161745
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	GDHSVGVNGPLSGAYAK	GDHSVGVNGPLSGAYAK	3	GDHSVGVNGPLSGAYAK3	7923.51	6297.9	5375.42
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	GDHTFADSYITVLPK	GDHTFADSYITVLPK	2	GDHTFADSYITVLPK2	1181.68	3028.44	980.637
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	GDHTFADSYITVLPK	GDHTFADSYITVLPK	3	GDHTFADSYITVLPK3	24055.1	27568.9	21865.7
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	GDHVWDGNSFDSK	GDHVWDGNSFDSK	2	GDHVWDGNSFDSK2	15293.2	16301	12225.9
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	GDHVWDGNSFDSK	GDHVWDGNSFDSK	3	GDHVWDGNSFDSK3	21753.4	33591.7	21606.7
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	GDIAATLEDDNEGDK	GDIAATLEDDNEGDK	2	GDIAATLEDDNEGDK2	20833.3	22425.3	26780.8
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	GDIAATLEDDNEGDKK	GDIAATLEDDNEGDKK	3	GDIAATLEDDNEGDKK3	6546.53	3743.64	3968.6
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	GDIAATLEDDNEGDKKK	GDIAATLEDDNEGDKKK	3	GDIAATLEDDNEGDKKK3	12488.3	5918.39	11618.7
P70560	P70560	COCA1_RAT	Col12a1	Collagen alpha-1(XII) chain (Fragment)	1	GDIASQNMMR	GDIASQNMMR	2	GDIASQNMMR2	7032.93	12283.6	12015.3
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	GDIEQKPESESILDVR	GDIEQKPESESILDVR	3	GDIEQKPESESILDVR3		5893.72	3986.63
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	GDIFLVR	GDIFLVR	2	GDIFLVR2	1.59284e+06	1.58406e+06	1.65763e+06
P51111	P51111	HD_RAT	Htt	Huntingtin	1	GDIGQPNDDDSAPLVHCVR	GDIGQPNDDDSAPLVHC(UniMod:4)VR	3	GDIGQPNDDDSAPLVHC(UniMod:4)VR3	32844.4	42838	35271.8
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	GDIIQLQR	GDIIQLQR	2	GDIIQLQR2	65364	65727.3	63282.1
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	GDIIVTTK	GDIIVTTK	2	GDIIVTTK2	18884.7	23953.2	22723.1
Q5XXR3	Q5XXR3	ARHG6_RAT	Arhgef6	Rho guanine nucleotide exchange factor 6	1	GDIIYVTR	GDIIYVTR	2	GDIIYVTR2	23903.4	14433.7	10275.4
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	GDILMNQK	GDILMNQK	2	GDILMNQK2	53268	55214.2	54783.3
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	GDILTGRPFYK	GDILTGRPFYK	3	GDILTGRPFYK3	11431.6	21957.6	13589.4
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	GDILTIVEQNVPESEGWWK	GDILTIVEQNVPESEGWWK	3	GDILTIVEQNVPESEGWWK3	83562.1	100898	82476.7
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	GDILTLLNSTNK	GDILTLLNSTNK	2	GDILTLLNSTNK2	268431	297426	314715
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	GDILTLLNSTNK	GDILTLLNSTNK	3	GDILTLLNSTNK3	2810.6	6900.22	8123.74
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	GDILTLLNSTNKDWWK	GDILTLLNSTNKDWWK	3	GDILTLLNSTNKDWWK3		13519.5	20813.8
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	GDILVVATGQPEMVK	GDILVVATGQPEMVK	2	GDILVVATGQPEMVK2	30304.8	28913.4	25862.7
F1M7P8	F1M7P8	F1M7P8_RAT	Spryd3	SPRY domain containing 3	1	GDIMGCGIMFPR	GDIMGC(UniMod:4)GIMFPR	2	GDIMGC(UniMod:4)GIMFPR2	26033.7	22296	29734.7
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	GDIQPQLDSALQDVNDK	GDIQPQLDSALQDVNDK	2	GDIQPQLDSALQDVNDK2	46190.3	41643.3	45310.3
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	GDIQPQLDSALQDVNDK	GDIQPQLDSALQDVNDK	3	GDIQPQLDSALQDVNDK3	12397.4	13400.4	10161.4
P16310	P16310	GHR_RAT	Ghr	Growth hormone receptor	1	GDIQVSWQPPPSADVLK	GDIQVSWQPPPSADVLK	2	GDIQVSWQPPPSADVLK2	7852.64	5883.77	
P16310	P16310	GHR_RAT	Ghr	Growth hormone receptor	1	GDIQVSWQPPPSADVLK	GDIQVSWQPPPSADVLK	3	GDIQVSWQPPPSADVLK3	4031.55		
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	GDITEDLVR	GDITEDLVR	2	GDITEDLVR2	36545.7	44071.5	34840.8
Q63433	Q63433	PKN1_RAT	Pkn1	Serine/threonine-protein kinase N1	1	GDIVARDEVESLMCEK	GDIVARDEVESLMC(UniMod:4)EK	3	GDIVARDEVESLMC(UniMod:4)EK3	4223.17	2421.79	4997.63
P27364	A0A140TAJ4;P27364	3BHS5_RAT	Hsd3b5	NADPH-dependent 3-keto-steroid reductase Hsd3b5	0	GDIVDAQFLR	GDIVDAQFLR	2	GDIVDAQFLR2	8496.75		8722.08
Q8R490	Q8R490	Q8R490_RAT	Cdh13	Cadherin 13	1	GDIVTVVSPALLDR	GDIVTVVSPALLDR	2	GDIVTVVSPALLDR2	57506.9	42776.3	48216
Q8R490	Q8R490	Q8R490_RAT	Cdh13	Cadherin 13	1	GDIVTVVSPALLDRETLENPK	GDIVTVVSPALLDRETLENPK	3	GDIVTVVSPALLDRETLENPK3	4459.8	5797.59	3454.96
Q5XIL4	Q5XIL4	Q5XIL4_RAT	Sorbs3	Sorbin and SH3 domain containing 3	1	GDIVYIHK	GDIVYIHK	2	GDIVYIHK2	19333.3	19048.4	15678.1
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	GDIYIPSLPK	GDIYIPSLPK	2	GDIYIPSLPK2	20717.5	15669.7	23876.6
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	GDIYTCSVVHEALHNHHTQK	GDIYTC(UniMod:4)SVVHEALHNHHTQK	3	GDIYTC(UniMod:4)SVVHEALHNHHTQK3	531034	486108	445367
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	GDIYTCSVVHEALHNHHTQK	GDIYTC(UniMod:4)SVVHEALHNHHTQK	4	GDIYTC(UniMod:4)SVVHEALHNHHTQK4	679436	646757	775455
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	GDKDCTGNFCLFR	GDKDC(UniMod:4)TGNFC(UniMod:4)LFR	2	GDKDC(UniMod:4)TGNFC(UniMod:4)LFR2	293078	271916	236346
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	GDKDCTGNFCLFR	GDKDC(UniMod:4)TGNFC(UniMod:4)LFR	3	GDKDC(UniMod:4)TGNFC(UniMod:4)LFR3	2.72613e+06	3.17593e+06	2.95913e+06
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	GDKDPGEESEAVDGK	GDKDPGEESEAVDGK	2	GDKDPGEESEAVDGK2	4281.65	3248.66	
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	GDKDPGEESEAVDGK	GDKDPGEESEAVDGK	3	GDKDPGEESEAVDGK3	6361.3	1866	4093.79
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	GDKEGDPATINAATEIDAPR	GDKEGDPATINAATEIDAPR	3	GDKEGDPATINAATEIDAPR3	199912	257573	235896
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	GDKELLIGNEK	GDKELLIGNEK	2	GDKELLIGNEK2	3.43528e+06	3.34288e+06	3.55131e+06
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	GDKELLIGNEK	GDKELLIGNEK	3	GDKELLIGNEK3	69099.2	3.71656e+07	4.01735e+07
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	GDKELLIGNEKVTSTGTSTTR	GDKELLIGNEKVTSTGTSTTR	4	GDKELLIGNEKVTSTGTSTTR4	3174.79	8232.78	3583.92
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	GDKEPNPASMR	GDKEPNPASMR	3	GDKEPNPASMR3	29753.1	24683.7	25220.3
A0A8I6B124	A0A8I6B124	A0A8I6B124_RAT	Zswim8	Zinc finger, SWIM-type containing 8	1	GDLALALMITYK	GDLALALMITYK	2	GDLALALMITYK2	2078.85		
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	GDLAPLWK	GDLAPLWK	2	GDLAPLWK2	26132.8	25232.7	33452.5
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	GDLAQGFSPVIQGHTDELWGLCTHPFQNR	GDLAQGFSPVIQGHTDELWGLC(UniMod:4)THPFQNR	4	GDLAQGFSPVIQGHTDELWGLC(UniMod:4)THPFQNR4	11475.2	20300.9	13281.3
M0R402	M0R402	M0R402_RAT	Tmx3	Thioredoxin-related transmembrane protein 3	1	GDLAYNYR	GDLAYNYR	2	GDLAYNYR2	118893	94371.2	111137
D4A3V6	D4A3V6	D4A3V6_RAT	Bloc1s3	Biogenesis of lysosome-related organelles complex 1 subunit 3	1	GDLCALAER	GDLC(UniMod:4)ALAER	2	GDLC(UniMod:4)ALAER2	13394.7	8289.23	
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	GDLDISYITSR	GDLDISYITSR	2	GDLDISYITSR2	55026.6	52113.7	45546.4
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	GDLDVNVR	GDLDVNVR	2	GDLDVNVR2	11690.9	8549.89	7322.51
Q80Z29	Q80Z29	NAMPT_RAT	Nampt	Nicotinamide phosphoribosyltransferase	1	GDLEEYGHDLLHTVFK	GDLEEYGHDLLHTVFK	3	GDLEEYGHDLLHTVFK3	8236.51	4750.53	8918.54
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	GDLENQMHIAEQR	GDLENQMHIAEQR	3	GDLENQMHIAEQR3	10324.6	4029.83	10646.3
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	GDLFASTFLIK	GDLFASTFLIK	2	GDLFASTFLIK2	36940.7	46967.7	34261.5
Q4FZV0	Q4FZV0	MANBA_RAT	Manba	Beta-mannosidase	1	GDLFVFDLK	GDLFVFDLK	2	GDLFVFDLK2	18280.6	10709	9002.67
P11980	M0RD14;P12928;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	GDLGIEIPAEK	GDLGIEIPAEK	2	GDLGIEIPAEK2	549653	472814	518336
Q9JK72	Q9JK72	CCS_RAT	Ccs	Copper chaperone for superoxide dismutase	1	GDLGNVHAEASGR	GDLGNVHAEASGR	2	GDLGNVHAEASGR2	8830.59	8026.77	6997.41
Q9JK72	Q9JK72	CCS_RAT	Ccs	Copper chaperone for superoxide dismutase	1	GDLGNVHAEASGR	GDLGNVHAEASGR	3	GDLGNVHAEASGR3	101108	115617	86252.5
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	GDLGTIHDMNRPFLLLMATPLER	GDLGTIHDMNRPFLLLMATPLER	3	GDLGTIHDMNRPFLLLMATPLER3	186221	133944	208963
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	GDLGTIHDMNRPFLLLMATPLER	GDLGTIHDMNRPFLLLMATPLER	4	GDLGTIHDMNRPFLLLMATPLER4	181565	169904	175099
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	GDLIGVVEALTR	GDLIGVVEALTR	2	GDLIGVVEALTR2	23322.9	32277.2	19008.8
F1MA10	F1MA10	F1MA10_RAT	Art4	NAD(P)(+)--arginine ADP-ribosyltransferase	1	GDLINLR	GDLINLR	2	GDLINLR2	8505.71	8247.17	6075.3
D4A7Z0	D4A7Z0	D4A7Z0_RAT	Wdtc1	WD and tetratricopeptide repeats 1	1	GDLLASGSDDQHTIVWDPLHHK	GDLLASGSDDQHTIVWDPLHHK	4	GDLLASGSDDQHTIVWDPLHHK4	8977.02	7900.37	4070.67
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	GDLLEGANAYHCEK	GDLLEGANAYHC(UniMod:4)EK	2	GDLLEGANAYHC(UniMod:4)EK2	33602.7	36060.6	32689
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	GDLLEGANAYHCEK	GDLLEGANAYHC(UniMod:4)EK	3	GDLLEGANAYHC(UniMod:4)EK3	48935.2	74900.3	85912.8
Q9WTR7	Q9WTR7	SC11C_RAT	Sec11c	Signal peptidase complex catalytic subunit SEC11C	1	GDLLFLTNFR	GDLLFLTNFR	2	GDLLFLTNFR2	21729	17109.3	12397.2
Q9WTR7	Q9WTR7	SC11C_RAT	Sec11c	Signal peptidase complex catalytic subunit SEC11C	1	GDLLFLTNFREDPIR	GDLLFLTNFREDPIR	3	GDLLFLTNFREDPIR3	13339.4	13830.7	19970.1
P42667	P42667	SC11A_RAT	Sec11a	Signal peptidase complex catalytic subunit SEC11A	1	GDLLFLTNR	GDLLFLTNR	2	GDLLFLTNR2	71918	58301.9	95854.1
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	GDLNHQGGASTSGTSLK	GDLNHQGGASTSGTSLK	2	GDLNHQGGASTSGTSLK2	4048.87	1249.67	4274.54
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	GDLNHQGGASTSGTSLK	GDLNHQGGASTSGTSLK	3	GDLNHQGGASTSGTSLK3	24022.2	32169	24878.1
O35815	O35815	ATX3_RAT	Atxn3	Ataxin-3	1	GDLPDCEADQLLQMIK	GDLPDC(UniMod:4)EADQLLQMIK	2	GDLPDC(UniMod:4)EADQLLQMIK2		6284.42	
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	GDLPGDSR	GDLPGDSR	1	GDLPGDSR1	1.77187e+06	1.45942e+06	1.53483e+06
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	GDLPGDSR	GDLPGDSR	2	GDLPGDSR2	512552	384834	507441
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	GDLPGDSRGDSATR	GDLPGDSRGDSATR	2	GDLPGDSRGDSATR2	337894	370680	455023
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	GDLPGDSRGDSATR	GDLPGDSRGDSATR	3	GDLPGDSRGDSATR3	186567	164272	6.1397e+06
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	GDLQSIVTFDLALDPGR	GDLQSIVTFDLALDPGR	2	GDLQSIVTFDLALDPGR2	32268	26948.7	24427.6
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	GDLQSQAMVR	GDLQSQAMVR	2	GDLQSQAMVR2	7667.72	4382	5127.72
Q6DGG9	Q6DGG9	CAMLG_RAT	Camlg	Guided entry of tail-anchored proteins factor CAMLG	1	GDLTADSAPR	GDLTADSAPR	2	GDLTADSAPR2	3275.36	7558.25	4061.14
P97523	P97523	MET_RAT	Met	Hepatocyte growth factor receptor	1	GDLTIANLGTSEGR	GDLTIANLGTSEGR	2	GDLTIANLGTSEGR2	3414.32	4868.48	6444.08
D4A264	D4A264	D4A264_RAT	Ptgr3	Zinc binding alcohol dehydrogenase, domain containing 2	1	GDLVCEVDLGHLAPEGR	GDLVC(UniMod:4)EVDLGHLAPEGR	3	GDLVC(UniMod:4)EVDLGHLAPEGR3	11181.5	20967.4	11873.5
Q9JLZ1	Q9JLZ1	GLRX3_RAT	Glrx3	Glutaredoxin-3	1	GDLVGGLDIVK	GDLVGGLDIVK	2	GDLVGGLDIVK2	222918	217382	175389
Q5BK26	Q5BK26	PLPL7_RAT	Pnpla7	Patatin-like phospholipase domain-containing protein 7	1	GDLVGVVEMLTHQAR	GDLVGVVEMLTHQAR	2	GDLVGVVEMLTHQAR2	36659.1	58007.6	27931.8
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	GDLYDDVDHPVPVSSPQR	GDLYDDVDHPVPVSSPQR	3	GDLYDDVDHPVPVSSPQR3	957721	920872	914635
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	GDLYFANVEEK	GDLYFANVEEK	2	GDLYFANVEEK2	42186.7	42960.1	36433
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	GDLYFANVEEKDSR	GDLYFANVEEKDSR	3	GDLYFANVEEKDSR3		9821.6	4095.39
Q9WVH8	Q9WVH8	FBLN5_RAT	Fbln5	Fibulin-5	1	GDMMCVNQNGGYLCIPR	GDMMC(UniMod:4)VNQNGGYLC(UniMod:4)IPR	3	GDMMC(UniMod:4)VNQNGGYLC(UniMod:4)IPR3	56277	60453.7	64890
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	GDMPFVVTR	GDMPFVVTR	2	GDMPFVVTR2	4.1984e+06	4.24742e+06	4.59758e+06
P41243	P41243	MATK_RAT	Matk	Megakaryocyte-associated tyrosine-protein kinase	1	GDMVTILEACEDK	GDMVTILEAC(UniMod:4)EDK	2	GDMVTILEAC(UniMod:4)EDK2	10520.3	14088	9436.88
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	GDNFLYTNGK	GDNFLYTNGK	2	GDNFLYTNGK2	56227.8	66432.9	77518.1
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	GDNGDTACSNEIGVGVSK	GDNGDTAC(UniMod:4)SNEIGVGVSK	2	GDNGDTAC(UniMod:4)SNEIGVGVSK2	5619.54	4536.97	5608.41
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	GDNGDTACSNEIGVGVSK	GDNGDTAC(UniMod:4)SNEIGVGVSK	3	GDNGDTAC(UniMod:4)SNEIGVGVSK3		4169.15	
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	GDNHLGYSLVTHIPAGAR	GDNHLGYSLVTHIPAGAR	2	GDNHLGYSLVTHIPAGAR2	6694.07	7236.47	5142.5
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	GDNHLGYSLVTHIPAGAR	GDNHLGYSLVTHIPAGAR	3	GDNHLGYSLVTHIPAGAR3	164629	155793	139123
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	GDNHLGYSLVTHIPAGAR	GDNHLGYSLVTHIPAGAR	4	GDNHLGYSLVTHIPAGAR4	296903	375925	347912
P42667	P42667	SC11A_RAT	Sec11a	Signal peptidase complex catalytic subunit SEC11A	1	GDNNAVDDR	GDNNAVDDR	2	GDNNAVDDR2			46263.2
Q9WTR7	Q9WTR7	SC11C_RAT	Sec11c	Signal peptidase complex catalytic subunit SEC11C	1	GDNNEVDDR	GDNNEVDDR	2	GDNNEVDDR2			3554.74
P98193	P98193	DMP1_RAT	Dmp1	Dentin matrix acidic phosphoprotein 1	1	GDNPDNTSQTGDQR	GDNPDNTSQTGDQR	2	GDNPDNTSQTGDQR2			8280.84
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	GDNQILQHHVLTR	GDNQILQHHVLTR	3	GDNQILQHHVLTR3	13063.4	6557.02	16962.4
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	GDNQILQHHVLTR	GDNQILQHHVLTR	4	GDNQILQHHVLTR4	32447.8	33214.1	29767.3
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	GDNQLNLEK	GDNQLNLEK	2	GDNQLNLEK2	40548.8	31952.5	26800.2
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	GDNVFFLQEVK	GDNVFFLQEVK	2	GDNVFFLQEVK2	46095.6	30698.2	44972.3
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	GDNVLINTFSGLLK	GDNVLINTFSGLLK	2	GDNVLINTFSGLLK2	22029.4	7079.55	19373.4
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	GDNVLINTYSGVLK	GDNVLINTYSGVLK	2	GDNVLINTYSGVLK2	33361.4	17457.1	30535.9
Q6IE70	Q6IE70	PAN2_RAT	Pan2	PAN2-PAN3 deadenylation complex catalytic subunit Pan2	1	GDPCQGSNFLR	GDPC(UniMod:4)QGSNFLR	2	GDPC(UniMod:4)QGSNFLR2	17242.4	15037.4	9827.56
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	GDPELQAWCR	GDPELQAWC(UniMod:4)R	2	GDPELQAWC(UniMod:4)R2	469095	411046	411517
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	GDPEMAPVYLK	GDPEMAPVYLK	2	GDPEMAPVYLK2	41043.6	65825.5	49263.6
A0A8I6AC18	A0A8I6AC18	A0A8I6AC18_RAT	Tmem179b	Transmembrane protein 179B	1	GDPEWSSETDALVGHR	GDPEWSSETDALVGHR	3	GDPEWSSETDALVGHR3	7727.84	7558.77	13271.9
Q6P7P5	Q6P7P5	5MP2_RAT	Bzw1	eIF5-mimic protein 2	1	GDPFKDIILYVK	GDPFKDIILYVK	2	GDPFKDIILYVK2	28777	43835.7	25926.3
Q6P7P5	Q6P7P5	5MP2_RAT	Bzw1	eIF5-mimic protein 2	1	GDPFKDIILYVK	GDPFKDIILYVK	3	GDPFKDIILYVK3	74500.2	103495	63533.7
Q8K3R4	Q8K3R4	Q8K3R4_RAT	Adipoq	Adiponectin d	1	GDPGDAGMTGAEGPR	GDPGDAGMTGAEGPR	2	GDPGDAGMTGAEGPR2	14590.6		14553
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	GDPGDQVK	GDPGDQVK	1	GDPGDQVK1			13034.5
P02454	P02454	CO1A1_RAT	Col1a1	Collagen alpha-1(I) chain	1	GDPGPQGPR	GDPGPQGPR	2	GDPGPQGPR2	58395.7		43667.9
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	GDPGYEGER	GDPGYEGER	2	GDPGYEGER2	9108.09	27446.8	
Q03626	Q6IE52;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	GDPIPNEQVFIK	GDPIPNEQVFIK	2	GDPIPNEQVFIK2	1.07587e+07	7.78579e+06	7.2381e+06
Q03626	Q6IE52;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	GDPIPNEQVFIK	GDPIPNEQVFIK	3	GDPIPNEQVFIK3	196514	101703	105650
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	GDPIPNEQVLIK	GDPIPNEQVLIK	2	GDPIPNEQVLIK2	859931	648188	542628
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	GDPIPNEQVLIK	GDPIPNEQVLIK	3	GDPIPNEQVLIK3	5.25882e+06	4.76804e+06	5.66247e+06
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	GDPIPNEQVLIKAR	GDPIPNEQVLIKAR	2	GDPIPNEQVLIKAR2	30528.8	22492.9	14597.5
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	GDPIPNEQVLIKAR	GDPIPNEQVLIKAR	3	GDPIPNEQVLIKAR3	436830	242783	178439
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	GDPIPNQQVFIK	GDPIPNQQVFIK	2	GDPIPNQQVFIK2	1.75225e+06	2.07201e+06	1.92625e+06
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	GDPIPNQQVFIK	GDPIPNQQVFIK	3	GDPIPNQQVFIK3	23418.7	25642.4	13454.6
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	GDPIVQHR	GDPIVQHR	2	GDPIVQHR2	23344.9	37944.5	25918.7
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	GDPIVQHRPMLEER	GDPIVQHRPMLEER	4	GDPIVQHRPMLEER4	14901.2	20398	16972.6
Q05096	Q05096	MYO1B_RAT	Myo1b	Unconventional myosin-Ib	1	GDPLGGVISNYLLEK	GDPLGGVISNYLLEK	2	GDPLGGVISNYLLEK2	11316.6	5629.98	22105.3
A0A8I6AKB0	A0A8I6AKB0	A0A8I6AKB0_RAT	Asmtl	Acetylserotonin O-methyltransferase-like	1	GDPLNAAGLPLNR	GDPLNAAGLPLNR	2	GDPLNAAGLPLNR2	11598.4	10376.9	6676.74
Q5BJT4	Q5BJT4	TXD15_RAT	Txndc15	Thioredoxin domain-containing protein 15	1	GDPMVVLSVIPGAAEDQR	GDPMVVLSVIPGAAEDQR	2	GDPMVVLSVIPGAAEDQR2	3402.55	1180.05	2269.64
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	GDPNKPSGFR	GDPNKPSGFR	2	GDPNKPSGFR2	111346	89788.8	83444.8
P08650	P08650	CO5_RAT	C5	Complement C5	1	GDPPIYR	GDPPIYR	2	GDPPIYR2	211697	676935	416649
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	GDPQVYEELFSYACPK	GDPQVYEELFSYAC(UniMod:4)PK	2	GDPQVYEELFSYAC(UniMod:4)PK2	112899	108461	114675
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	GDPQVYEELFSYACPK	GDPQVYEELFSYAC(UniMod:4)PK	3	GDPQVYEELFSYAC(UniMod:4)PK3	43245.3	42742.1	52875.8
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	GDPQYLLDSNSWIEEMPSER	GDPQYLLDSNSWIEEMPSER	3	GDPQYLLDSNSWIEEMPSER3	1.89972e+06	1.97448e+06	2.00457e+06
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	GDPQYLLDSNSWIEEMPSER	GDPQYLLDSNSWIEEMPSER	4	GDPQYLLDSNSWIEEMPSER4	5610.91	7562.06	3738.62
P08649	P08649	CO4_RAT	C4	Complement C4	1	GDPQYLLDSNTWIEEMPSER	GDPQYLLDSNTWIEEMPSER	3	GDPQYLLDSNTWIEEMPSER3	29125.8	34363.9	32465.8
P08649	P08649	CO4_RAT	C4	Complement C4	1	GDPQYLLDSNTWIEEMPSER	GDPQYLLDSNTWIEEMPSER	4	GDPQYLLDSNTWIEEMPSER4	7275.7	9179.21	6469.43
O35217	O35217	MINP1_RAT	Minpp1	Multiple inositol polyphosphate phosphatase 1	1	GDPVASVLSPYFGTK	GDPVASVLSPYFGTK	2	GDPVASVLSPYFGTK2	72235.7	64242.5	67147.6
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	GDPVAVLK	GDPVAVLK	1	GDPVAVLK1	5274.1	3154.02	4073.69
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	GDPVAVLK	GDPVAVLK	2	GDPVAVLK2	167044	152988	150517
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	GDPVGGHIHSYLLEK	GDPVGGHIHSYLLEK	3	GDPVGGHIHSYLLEK3	60393.4	76128.8	57664.7
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	GDPVGGHIHSYLLEK	GDPVGGHIHSYLLEK	4	GDPVGGHIHSYLLEK4	7130.18	6200.05	8615.32
A0A8I5ZVT2	A0A8I5ZVT2	A0A8I5ZVT2_RAT	Fndc3a	Fibronectin type III domain containing 3a	1	GDPVIYNLQVMVGK	GDPVIYNLQVMVGK	2	GDPVIYNLQVMVGK2		4956.71	
Q66H84	Q66H84;Q80ZF4	MAPK3_RAT	Mapkapk3	MAP kinase-activated protein kinase 3	0	GDQAFTER	GDQAFTER	2	GDQAFTER2	58560.9	39202.4	32191.2
A0A8I6ASC6	A0A8I6ASC6	A0A8I6ASC6_RAT	Igdcc4	Immunoglobulin superfamily, DCC subclass, member 4	1	GDQAWDVGPVR	GDQAWDVGPVR	2	GDQAWDVGPVR2	3322.6		2562.47
P30427	P30427	PLEC_RAT	Plec	Plectin	1	GDQCQLVGPAQPFHWK	GDQC(UniMod:4)QLVGPAQPFHWK	3	GDQC(UniMod:4)QLVGPAQPFHWK3	4150.41	3012.36	
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	GDQENVHPDVMLVQPR	GDQENVHPDVMLVQPR	2	GDQENVHPDVMLVQPR2	40012.7	34111.8	18901.3
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	GDQENVHPDVMLVQPR	GDQENVHPDVMLVQPR	3	GDQENVHPDVMLVQPR3	179496	195856	207746
Q63493	Q63493	CD1D_RAT	Cd1d	Antigen-presenting glycoprotein CD1d	1	GDQEQGGTHR	GDQEQGGTHR	2	GDQEQGGTHR2			3422.36
B5DEY9	B5DEY9	B5DEY9_RAT	Csgalnact1	Hexosyltransferase	1	GDQEQLGLPR	GDQEQLGLPR	2	GDQEQLGLPR2	6693.97	9687.35	8004.43
Q5BJM5	Q5BJM5	PKHO1_RAT	Plekho1	Pleckstrin homology domain-containing family O member 1	1	GDQLYVSEK	GDQLYVSEK	2	GDQLYVSEK2	12895	22355.2	12714.1
Q9JLU4	Q9JLU4	SHAN3_RAT	Shank3	SH3 and multiple ankyrin repeat domains protein 3	1	GDQPAASPGPTLR	GDQPAASPGPTLR	2	GDQPAASPGPTLR2	10259.6	11429.6	8405.91
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	GDQPLCNIPIENILAVER	GDQPLC(UniMod:4)NIPIENILAVER	3	GDQPLC(UniMod:4)NIPIENILAVER3	55148.7	101928	79520.9
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	GDQQDEVDEK	GDQQDEVDEK	2	GDQQDEVDEK2			26587.3
A0A0G2JT44	A0A0G2JT44	A0A0G2JT44_RAT	Tmc6	Transmembrane channel-like protein	1	GDQTLPRPEGAPVLSTATLR	GDQTLPRPEGAPVLSTATLR	3	GDQTLPRPEGAPVLSTATLR3	31433.2	31771.9	24084.8
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	GDQVSQNGLPAEQGSPR	GDQVSQNGLPAEQGSPR	2	GDQVSQNGLPAEQGSPR2	101722	95729	111282
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	GDQVSQNGLPAEQGSPR	GDQVSQNGLPAEQGSPR	3	GDQVSQNGLPAEQGSPR3	108162	141723	144725
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	GDRDGGSAVTIDLSGFNEK	GDRDGGSAVTIDLSGFNEK	3	GDRDGGSAVTIDLSGFNEK3	25740	32463	24362.9
P08661	P08661;Q7TMC0	MBL2_RAT	Mbl2	Mannose-binding protein C	0	GDRGESVEFDTTNIDLEIAALR	GDRGESVEFDTTNIDLEIAALR	3	GDRGESVEFDTTNIDLEIAALR3	1040.32		2572.32
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	GDRGNDESPIEMIK	GDRGNDESPIEMIK	3	GDRGNDESPIEMIK3	9432.85	9860.96	10874.4
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	GDRIEAIGGQQVCK	GDRIEAIGGQQVC(UniMod:4)K	3	GDRIEAIGGQQVC(UniMod:4)K3	21622.1		11655.5
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	GDRLPKPELCPPVLYTLMTR	GDRLPKPELC(UniMod:4)PPVLYTLMTR	4	GDRLPKPELC(UniMod:4)PPVLYTLMTR4	12667.6	14798.4	26225.3
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	GDRTPLPIDPR	GDRTPLPIDPR	3	GDRTPLPIDPR3	24626.1	27133.8	27540.1
F1M842	F1M842	F1M842_RAT	Tp53bp1	Tumor protein p53 binding protein 1	1	GDSESAPEMDGK	GDSESAPEMDGK	2	GDSESAPEMDGK2	2987.18	2520.08	4362.85
D4A0T9	D4A0T9	D4A0T9_RAT	Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	1	GDSFLDGTR	GDSFLDGTR	2	GDSFLDGTR2	9516.55	7764.82	8431.41
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	GDSGDTLAATQSLLK	GDSGDTLAATQSLLK	2	GDSGDTLAATQSLLK2	17313.3	19700.9	23938
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	GDSGGALVFLDNETQR	GDSGGALVFLDNETQR	2	GDSGGALVFLDNETQR2	31215.5	37613.9	50036.9
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	GDSGGALVFLDNETQR	GDSGGALVFLDNETQR	3	GDSGGALVFLDNETQR3			2663.81
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	GDSGGPLSCK	GDSGGPLSC(UniMod:4)K	2	GDSGGPLSC(UniMod:4)K2	25903.8	24046.7	27297.1
P09650	P09650	MCPT1_RAT	Mcpt1	Mast cell protease 1	1	GDSGGPLVCAGVAHGIVSYGR	GDSGGPLVC(UniMod:4)AGVAHGIVSYGR	3	GDSGGPLVC(UniMod:4)AGVAHGIVSYGR3	29612.4	28023.3	31682
P32038	P32038	CFAD_RAT	Cfd	Complement factor D	1	GDSGGPLVCGDAVEAVVTWGSR	GDSGGPLVC(UniMod:4)GDAVEAVVTWGSR	3	GDSGGPLVC(UniMod:4)GDAVEAVVTWGSR3	16400.8	10352.6	15108.9
P14272	P14272;Q9WUW3;P18291	KLKB1_RAT	Klkb1	Plasma kallikrein	0	GDSGGPLVCK	GDSGGPLVC(UniMod:4)K	2	GDSGGPLVC(UniMod:4)K2	735171	730139	752412
Q9Z1W6	Q9Z1W6	LYRIC_RAT	Mtdh	Protein LYRIC	1	GDSHLNVQVSNFK	GDSHLNVQVSNFK	2	GDSHLNVQVSNFK2	74154.7	43168.4	
Q9Z1W6	Q9Z1W6	LYRIC_RAT	Mtdh	Protein LYRIC	1	GDSHLNVQVSNFK	GDSHLNVQVSNFK	3	GDSHLNVQVSNFK3	24129.1	28224.5	17863.9
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	GDSLASWDGILDLPEQNSIHK	GDSLASWDGILDLPEQNSIHK	3	GDSLASWDGILDLPEQNSIHK3	26644.8	24236.2	15193.4
P08721	P08721	OSTP_RAT	Spp1	Osteopontin	1	GDSLAYGLR	GDSLAYGLR	2	GDSLAYGLR2	288150	324631	325102
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	GDSLDSVEALIK	GDSLDSVEALIK	2	GDSLDSVEALIK2	283173	285243	295644
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	GDSLDSVEALIKK	GDSLDSVEALIKK	2	GDSLDSVEALIKK2	7605.76	5431.1	881.616
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	GDSLDSVEALIKK	GDSLDSVEALIKK	3	GDSLDSVEALIKK3	9241.2	13368.3	17459.5
Q2THW7	Q2THW7	ZDHC5_RAT	Zdhhc5	Palmitoyltransferase ZDHHC5	1	GDSLKEPTSIADSSR	GDSLKEPTSIADSSR	3	GDSLKEPTSIADSSR3	11080.7	7489.99	19425.5
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	GDSLPSDAGSSYK	GDSLPSDAGSSYK	2	GDSLPSDAGSSYK2	320089	345190	315446
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	GDSLPSDAGSSYKVPSR	GDSLPSDAGSSYKVPSR	3	GDSLPSDAGSSYKVPSR3	26318	43966.9	50870.3
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GDSPASSK	GDSPASSK	1	GDSPASSK1		1423.47	2918.8
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GDSPASSKPVSINYQTEIDK	GDSPASSKPVSINYQTEIDK	3	GDSPASSKPVSINYQTEIDK3	13173.9	11337.8	17964.9
B4F785	B4F785	EGFLA_RAT	Egflam	Pikachurin	1	GDSPMRPNSDFISLGLR	GDSPMRPNSDFISLGLR	3	GDSPMRPNSDFISLGLR3		3930.57	
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	GDSPSIDYTELLQHFEK	GDSPSIDYTELLQHFEK	3	GDSPSIDYTELLQHFEK3	22182.3	23828.5	22943.8
A0A8I6A6S4	A0A8I6A6S4	A0A8I6A6S4_RAT	Stim2	Stromal interaction molecule 2	1	GDSPVTADVSR	GDSPVTADVSR	2	GDSPVTADVSR2	4127.33	2774.73	
G3V6R9	G3V6R9	G3V6R9_RAT	Bloc1s4	Biogenesis of lysosomal organelles complex 1 subunit 4	1	GDSSHVVSEGVPR	GDSSHVVSEGVPR	2	GDSSHVVSEGVPR2		2364.62	2707.51
G3V6R9	G3V6R9	G3V6R9_RAT	Bloc1s4	Biogenesis of lysosomal organelles complex 1 subunit 4	1	GDSSHVVSEGVPR	GDSSHVVSEGVPR	3	GDSSHVVSEGVPR3	20689.6	15908.6	12740.5
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	GDSSVYCR	GDSSVYC(UniMod:4)R	2	GDSSVYC(UniMod:4)R2	319466	271894	303019
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	GDSWTPPIPNSLSCEK	GDSWTPPIPNSLSC(UniMod:4)EK	2	GDSWTPPIPNSLSC(UniMod:4)EK2	91909.5	108633	90303.3
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	GDSWTPPIPNSLSCEKDILTK	GDSWTPPIPNSLSC(UniMod:4)EKDILTK	3	GDSWTPPIPNSLSC(UniMod:4)EKDILTK3	36233.7	51505.7	56467.4
A0A0G2K7U7	A0A0G2K7U7	A0A0G2K7U7_RAT	Ankrd27	Ankyrin repeat domain 27	1	GDTALHIAAR	GDTALHIAAR	2	GDTALHIAAR2		2307.85	
D4A1B2	D4A1B2	D4A1B2_RAT	Arpin	Arpin	1	GDTDRLTLEVLK	GDTDRLTLEVLK	3	GDTDRLTLEVLK3	6705.22	12645	12899.8
A0A8I6A9E8	A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	1	GDTFFIISK	GDTFFIISK	2	GDTFFIISK2	16771.1	11965.4	10864
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	GDTLLLECFAEGLPTPQIEWSK	GDTLLLEC(UniMod:4)FAEGLPTPQIEWSK	3	GDTLLLEC(UniMod:4)FAEGLPTPQIEWSK3	8669.86		
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	GDTLYVGTTR	GDTLYVGTTR	2	GDTLYVGTTR2	46845.9	36014.9	42080.7
Q02253	Q02253	MMSA_RAT	Aldh6a1	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial	1	GDTNFYGK	GDTNFYGK	2	GDTNFYGK2	59135	46253	47749.1
G3V7T6	G3V7T6	G3V7T6_RAT	Sf3b1	Splicing factor 3b, subunit 1	1	GDTPGHATPGHGGATSSAR	GDTPGHATPGHGGATSSAR	3	GDTPGHATPGHGGATSSAR3			1105.51
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	GDTTDLLK	GDTTDLLK	2	GDTTDLLK2	11819.2	14475.6	10510.4
Q9ESS6	Q9ESS6	BCAM_RAT	Bcam	Basal cell adhesion molecule	1	GDTTPAEPPFEGR	GDTTPAEPPFEGR	2	GDTTPAEPPFEGR2	10081.3	8639.19	13515.8
F1LMI3	F1LMI3	F1LMI3_RAT	Cdh3	Cadherin 3	1	GDTVALSLK	GDTVALSLK	2	GDTVALSLK2	7788.82		6398.29
F1LZJ4	F1LZJ4	F1LZJ4_RAT	Hyi	Putative hydroxypyruvate isomerase	1	GDTVEGLSWLR	GDTVEGLSWLR	2	GDTVEGLSWLR2		6735.23	
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	GDTVLLK	GDTVLLK	1	GDTVLLK1	57732.7	39933	49581.7
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	GDTWYLVDSR	GDTWYLVDSR	2	GDTWYLVDSR2	50337.4	64671.9	71643.8
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	GDVAFMK	GDVAFMK	1	GDVAFMK1	5760.62	4549.11	8988.53
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	GDVAFMK	GDVAFMK	2	GDVAFMK2	113709	151043	114245
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	GDVAFVK	GDVAFVK	1	GDVAFVK1	75536.5	65307.1	67473.5
Q32Q06	Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	1	GDVDMSEVEHFMPILMEK	GDVDMSEVEHFMPILMEK	3	GDVDMSEVEHFMPILMEK3	33301.4	36686.3	24303.8
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	GDVDVNVEDK	GDVDVNVEDK	2	GDVDVNVEDK2	79932.9	85408.4	75545.5
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	GDVDVNVEDKK	GDVDVNVEDKK	2	GDVDVNVEDKK2	2913.96	3248.27	3951.63
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	GDVDVNVEDKK	GDVDVNVEDKK	3	GDVDVNVEDKK3	4934.78	10143.8	
A0A0G2JUA5	A0A0G2JUA5	A0A0G2JUA5_RAT	Ahnak	AHNAK nucleoprotein	1	GDVDVSLPK	GDVDVSLPK	2	GDVDVSLPK2	10645.5	9235.25	7792.36
Q9JMB5	Q9JMB5	ADRM1_RAT	Adrm1	Proteasomal ubiquitin receptor ADRM1	1	GDVEAFAK	GDVEAFAK	2	GDVEAFAK2	96847	93429	98191.1
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	GDVEEDEAIPDSEQDIRPR	GDVEEDEAIPDSEQDIRPR	3	GDVEEDEAIPDSEQDIRPR3	143872	196890	140941
D3ZER6	D3ZER6	D3ZER6_RAT	Tnpo2	Transportin 2	1	GDVEEDEAVPDSEQDIKPR	GDVEEDEAVPDSEQDIKPR	3	GDVEEDEAVPDSEQDIKPR3	114141	107083	117139
Q9Z244	Q9Z244	GMPR1_RAT	Gmpr	GMP reductase 1	1	GDVENTILDILGGLR	GDVENTILDILGGLR	2	GDVENTILDILGGLR2	1423.76	8859.22	3939.06
Q9Z244	Q9Z244	GMPR1_RAT	Gmpr	GMP reductase 1	1	GDVENTILDILGGLR	GDVENTILDILGGLR	3	GDVENTILDILGGLR3	10230.9		
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	GDVETFPIPK	GDVETFPIPK	2	GDVETFPIPK2	63158.9	74649.4	68184.3
B2RYK9	B2RYK9	B2RYK9_RAT	Dmkn	Dermokine	1	GDVFDHQLGEAAR	GDVFDHQLGEAAR	3	GDVFDHQLGEAAR3	28455	32769.1	21818.3
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	GDVFTMPEDEYWSYDYPEETK	GDVFTMPEDEYWSYDYPEETK	3	GDVFTMPEDEYWSYDYPEETK3	1000.31		
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	GDVGLGLVK	GDVGLGLVK	1	GDVGLGLVK1	1985.54		1787.84
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	GDVGLGLVK	GDVGLGLVK	2	GDVGLGLVK2	189345	165604	188471
O55043	O55043	ARHG7_RAT	Arhgef7	Rho guanine nucleotide exchange factor 7	1	GDVIHVTR	GDVIHVTR	2	GDVIHVTR2	14167.1	7330.96	8639.43
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	GDVIYILSK	GDVIYILSK	2	GDVIYILSK2	27406.6	23065.5	26153.8
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	GDVLAAWSGIR	GDVLAAWSGIR	2	GDVLAAWSGIR2	5708.62	18687.9	10237.8
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	GDVLAAWSGIRPLVTDPK	GDVLAAWSGIRPLVTDPK	3	GDVLAAWSGIRPLVTDPK3	22496.4	22978.6	34085
A0A8I6GH88	A0A8I6GH88	A0A8I6GH88_RAT	Fkbp2	peptidylprolyl isomerase	1	GDVLHMHYTGK	GDVLHMHYTGK	3	GDVLHMHYTGK3	27266.5	23839.7	28239.2
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	GDVLTIVAVTK	GDVLTIVAVTK	2	GDVLTIVAVTK2	47338	41297.4	41096
B2RZ33	B2RZ33	B2RZ33_RAT	Nck1	Cytoplasmic protein	1	GDVMDVIEKPENDPEWWK	GDVMDVIEKPENDPEWWK	3	GDVMDVIEKPENDPEWWK3	18489.3	13020.2	
A0A8I6AUH0	A0A8I6AUH0	A0A8I6AUH0_RAT	Camk1d	Calcium/calmodulin-dependent protein kinase ID	1	GDVMSTACGTPGYVAPEVLAQKPYSK	GDVMSTAC(UniMod:4)GTPGYVAPEVLAQKPYSK	3	GDVMSTAC(UniMod:4)GTPGYVAPEVLAQKPYSK3	2606.25		
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	GDVNDNFQGVLQNVR	GDVNDNFQGVLQNVR	2	GDVNDNFQGVLQNVR2	50600.3	46567	45055.2
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	GDVNDNFQGVLQNVR	GDVNDNFQGVLQNVR	3	GDVNDNFQGVLQNVR3	6.27617e+06	7.13207e+06	7.3584e+06
P23764	P30710;P23764	GPX3_RAT	Gpx3	Glutathione peroxidase 3	0	GDVNGEK	GDVNGEK	1	GDVNGEK1	14213.7		6284.36
Q80Z70	Q80Z70	SE1L1_RAT	Sel1l	Protein sel-1 homolog 1	1	GDVQAQVGLGQLHLHGGR	GDVQAQVGLGQLHLHGGR	3	GDVQAQVGLGQLHLHGGR3	9688.92	6612.86	10402
Q80Z70	Q80Z70	SE1L1_RAT	Sel1l	Protein sel-1 homolog 1	1	GDVQAQVGLGQLHLHGGR	GDVQAQVGLGQLHLHGGR	4	GDVQAQVGLGQLHLHGGR4	55039.2	35270.8	35403.9
A0A8I6AU33	A0A8I6AU33	A0A8I6AU33_RAT	Gpr89b	G protein-coupled receptor 89B	1	GDVQNKPSGLWGMLK	GDVQNKPSGLWGMLK	3	GDVQNKPSGLWGMLK3	2536.14	8028.64	11814.4
D3ZK93	D3ZK93	GSG1L_RAT	Gsg1l	Germ cell-specific gene 1-like protein	1	GDVSEEEDFR	GDVSEEEDFR	2	GDVSEEEDFR2	4885.88	5824.96	8215.34
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	GDVSISVEEGK	GDVSISVEEGK	2	GDVSISVEEGK2	5370.34		
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	GDVSISVEEGKENLLR	GDVSISVEEGKENLLR	2	GDVSISVEEGKENLLR2	1699.02	1667.48	2605.84
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	GDVSISVEEGKENLLR	GDVSISVEEGKENLLR	3	GDVSISVEEGKENLLR3	54910.7	65590.6	57702.4
D4A748	D4A748	D4A748_RAT	Wdfy4	WDFY family member 4	1	GDVSQTNAENQVCPVFR	GDVSQTNAENQVC(UniMod:4)PVFR	2	GDVSQTNAENQVC(UniMod:4)PVFR2	1218.4	1737.39	1686.61
Q9EPH2	Q9EPH2	MRP_RAT	Marcksl1	MARCKS-related protein	1	GDVTAEEAAGASPAK	GDVTAEEAAGASPAK	2	GDVTAEEAAGASPAK2	28360.8	33879.7	19658.9
D4ADD8	D4ADD8	D4ADD8_RAT	Dctn6	Dynactin subunit 6	1	GDVTIGPR	GDVTIGPR	2	GDVTIGPR2	57421.4	54879.1	47461.3
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	GDVTITNDGATILK	GDVTITNDGATILK	2	GDVTITNDGATILK2	337530	384064	334914
P07895	P07895	SODM_RAT	Sod2	Superoxide dismutase [Mn], mitochondrial	1	GDVTTQVALQPALK	GDVTTQVALQPALK	2	GDVTTQVALQPALK2	1.44858e+06	57247.1	1.39756e+06
P07895	P07895	SODM_RAT	Sod2	Superoxide dismutase [Mn], mitochondrial	1	GDVTTQVALQPALK	GDVTTQVALQPALK	3	GDVTTQVALQPALK3	122105	118490	144255
D4A8B0	D4A8B0	D4A8B0_RAT	Sec14l5	SEC14-like lipid binding 5	1	GDVVFSLYHAK	GDVVFSLYHAK	2	GDVVFSLYHAK2	2818.97	2491.64	
D4A8B0	D4A8B0	D4A8B0_RAT	Sec14l5	SEC14-like lipid binding 5	1	GDVVFSLYHAK	GDVVFSLYHAK	3	GDVVFSLYHAK3	5520.9	6450.5	5232.25
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	GDVVIVLTGWR	GDVVIVLTGWR	2	GDVVIVLTGWR2	9059.77	6313.89	4157.44
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	GDVVIVLTGWRPGSGFTNTMR	GDVVIVLTGWRPGSGFTNTMR	3	GDVVIVLTGWRPGSGFTNTMR3	104868	118453	115938
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	GDVVLQSDHVIETLTK	GDVVLQSDHVIETLTK	2	GDVVLQSDHVIETLTK2	28689.5	27555.1	27481.1
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	GDVVLQSDHVIETLTK	GDVVLQSDHVIETLTK	3	GDVVLQSDHVIETLTK3	434025	493531	514828
Q5XIF6	Q5XIF6	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	1	GDVVPKDVNAAIAAIK	GDVVPKDVNAAIAAIK	3	GDVVPKDVNAAIAAIK3	6462.6	6091.7	7986.88
Q6AYZ1	A0A8I6AF82;P68370;Q68FR8;Q6AYZ1;Q6P9V9	TBA1C_RAT	Tuba1c	Tubulin alpha-1C chain	0	GDVVPKDVNAAIATIK	GDVVPKDVNAAIATIK	3	GDVVPKDVNAAIATIK3	8608.5	3679.21	6991.64
Q9R1J8	Q9R1J8	P3H1_RAT	P3h1	Prolyl 3-hydroxylase 1	1	GDWPGVVLNMER	GDWPGVVLNMER	2	GDWPGVVLNMER2	8969.08	7525.29	5889.53
A0A096MKE0	A0A096MKE0	A0A096MKE0_RAT	Asph	Aspartate-beta-hydroxylase	1	GDWSQFTLWQQGR	GDWSQFTLWQQGR	2	GDWSQFTLWQQGR2	11940.2	21761.2	8872.94
G3V829	G3V829	G3V829_RAT	Fubp3	Far upstream element binding protein 3	1	GDWSVGTPGGIQEITYTVPADK	GDWSVGTPGGIQEITYTVPADK	3	GDWSVGTPGGIQEITYTVPADK3			23477.8
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	GDYAPILQK	GDYAPILQK	2	GDYAPILQK2	50707.7	47374.5	39532.8
A0A8I6GHH3	A0A8I6GHH3	A0A8I6GHH3_RAT	Sh3bgrl	SH3 domain binding glutamate-rich protein like	1	GDYDAFFEAR	GDYDAFFEAR	2	GDYDAFFEAR2	14538.1	23169.8	29305.4
D4ADE8	D4ADE8	D4ADE8_RAT	Ddx3x	RNA helicase	1	GDYDGIGGR	GDYDGIGGR	2	GDYDGIGGR2	18169	15569.6	24100.9
A0A8I6A5H5	A0A8I6A5H5	A0A8I6A5H5_RAT	Rela	RELA proto-oncogene, NF-kB subunit	1	GDYDLNAVR	GDYDLNAVR	2	GDYDLNAVR2	23784.9	24511.1	31560.3
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	GDYLDVGIGQVSVK	GDYLDVGIGQVSVK	2	GDYLDVGIGQVSVK2	21514.5	29996.1	18564.7
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	GDYLPETTRPQEMMK	GDYLPETTRPQEMMK	3	GDYLPETTRPQEMMK3	30213.2	33772.7	29527.5
P11980	A0A8I6AKN1;M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	GDYPLEAVR	GDYPLEAVR	2	GDYPLEAVR2	539953	479343	458221
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	GDYPQAMK	GDYPQAMK	2	GDYPQAMK2	112172	98785	98743.1
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GDYSVLVPGLR	GDYSVLVPGLR	2	GDYSVLVPGLR2	213452	320744	250056
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	GDYTLDHVSACAGGGFQIGGNVYK	GDYTLDHVSAC(UniMod:4)AGGGFQIGGNVYK	3	GDYTLDHVSAC(UniMod:4)AGGGFQIGGNVYK3	34953.5	30151.8	26694.2
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	GDYVLAVK	GDYVLAVK	2	GDYVLAVK2	6312.07	11298.5	7955.14
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	GDYVWTVTDSGPGPLFR	GDYVWTVTDSGPGPLFR	2	GDYVWTVTDSGPGPLFR2	46315	50516.4	57443
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	GDYVWTVTDSGPGPLFR	GDYVWTVTDSGPGPLFR	3	GDYVWTVTDSGPGPLFR3	28007.8	19873.5	24137
F1LXF5	F1LXF5	F1LXF5_RAT	Get4	Guided entry of tail-anchored proteins factor 4	1	GDYYEAHQMYR	GDYYEAHQMYR	2	GDYYEAHQMYR2	7901.8	12198.7	8357.36
F1LXF5	F1LXF5	F1LXF5_RAT	Get4	Guided entry of tail-anchored proteins factor 4	1	GDYYEAHQMYR	GDYYEAHQMYR	3	GDYYEAHQMYR3	76464.7	102795	108420
P30009	P30009	MARCS_RAT	Marcks	Myristoylated alanine-rich C-kinase substrate	1	GEAAAERPGEAAVASSPSK	GEAAAERPGEAAVASSPSK	2	GEAAAERPGEAAVASSPSK2	2455.42	5119.09	2317.05
P30009	P30009	MARCS_RAT	Marcks	Myristoylated alanine-rich C-kinase substrate	1	GEAAAERPGEAAVASSPSK	GEAAAERPGEAAVASSPSK	3	GEAAAERPGEAAVASSPSK3	102192	124923	107426
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	GEAAALTETAK	GEAAALTETAK	2	GEAAALTETAK2	116998	120863	119893
Q9QXU9	Q9QXU9	PCS1N_RAT	Pcsk1n	ProSAAS	1	GEAAGAVQELAR	GEAAGAVQELAR	2	GEAAGAVQELAR2	3318.54	3775.93	6478.39
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	GEAATELDLEREENAQELPVK	GEAATELDLEREENAQELPVK	3	GEAATELDLEREENAQELPVK3	110826	113755	112018
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	GEACEVVIDSTEYVDPSYK	GEAC(UniMod:4)EVVIDSTEYVDPSYK	3	GEAC(UniMod:4)EVVIDSTEYVDPSYK3	2581.66		4359.72
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	GEACEVVIDSTEYVDPSYKDR	GEAC(UniMod:4)EVVIDSTEYVDPSYKDR	3	GEAC(UniMod:4)EVVIDSTEYVDPSYKDR3	9266.94	8305.85	8097.99
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	GEADDLKR	GEADDLKR	2	GEADDLKR2	11939.8		10701
P62603	P62603	TRI26_RAT	Trim26	Tripartite motif-containing protein 26	1	GEADILAALTK	GEADILAALTK	2	GEADILAALTK2	1892.44	2830.29	1866.32
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	GEAEAFAVGAR	GEAEAFAVGAR	2	GEAEAFAVGAR2	9227.92	8712.37	11861
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	GEAEDMLMR	GEAEDMLMR	2	GEAEDMLMR2	66716.3	50479.8	55051.5
Q63433	Q63433	PKN1_RAT	Pkn1	Serine/threonine-protein kinase N1	1	GEAENSTEVSTVLK	GEAENSTEVSTVLK	2	GEAENSTEVSTVLK2	1674.02		
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	GEAFILK	GEAFILK	1	GEAFILK1	101753	82911.9	54393.1
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	GEAFILK	GEAFILK	2	GEAFILK2	4.11326e+06	3.89988e+06	3.4615e+06
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	GEAFMLK	GEAFMLK	1	GEAFMLK1	135341	75512.7	61311.1
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	GEAFMLK	GEAFMLK	2	GEAFMLK2	4.17594e+06	3.06455e+06	2.83751e+06
P14046	Q6IE52;A0A8I6AG69;P06238;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	GEAFTLK	GEAFTLK	1	GEAFTLK1	1.66361e+06	1.5202e+06	1.75728e+06
P14046	Q6IE52;A0A8I6AG69;P06238;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	GEAFTLK	GEAFTLK	2	GEAFTLK2	229120	182050	172061
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	GEAGDEGNAGPDGAPGER	GEAGDEGNAGPDGAPGER	2	GEAGDEGNAGPDGAPGER2	2620.61	1302.76	
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	GEAHLAVNDFDLAR	GEAHLAVNDFDLAR	3	GEAHLAVNDFDLAR3	3379.66		
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	GEAHTVFWQGR	GEAHTVFWQGR	2	GEAHTVFWQGR2	9998.72	5712.39	4130.6
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	GEAHTVFWQGR	GEAHTVFWQGR	3	GEAHTVFWQGR3	107959	113452	76414.9
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	GEAIEAILAALEVVSEPFR	GEAIEAILAALEVVSEPFR	3	GEAIEAILAALEVVSEPFR3	3387.86		313.721
Q5I6B8	Q5I6B8	PI51C_RAT	Pip5k1c	Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma	1	GEAIETDDTMGGIPAVNGR	GEAIETDDTMGGIPAVNGR	2	GEAIETDDTMGGIPAVNGR2	2568.21		4012.76
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	GEAITFK	GEAITFK	1	GEAITFK1			1.7573e+06
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	GEAITFK	GEAITFK	2	GEAITFK2	60587.9	55877.2	62363.1
Q4KM74	Q4KM74	SC22B_RAT	Sec22b	Vesicle-trafficking protein SEC22b	1	GEALSALDSK	GEALSALDSK	2	GEALSALDSK2	154379	157568	157954
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	GEALVPTTQSK	GEALVPTTQSK	2	GEALVPTTQSK2	14355.6	26253.6	20402.1
P97711	P97711;P70507	GRK6_RAT	Grk6	G protein-coupled receptor kinase 6	0	GEAMALNEK	GEAMALNEK	2	GEAMALNEK2	43737.6	39256.1	29984.9
Q5PQK2	A0A8I6A2Z4;Q5PQK2;B2RYG5	Q5PQK2_RAT	Fus	FUS RNA binding protein	0	GEATVSFDDPPSAK	GEATVSFDDPPSAK	2	GEATVSFDDPPSAK2	18637.9	16295	13315.2
Q8K4T4	Q8K4T4	FLIP1_RAT	Filip1	Filamin-A-interacting protein 1	1	GEAVSQEAELR	GEAVSQEAELR	2	GEAVSQEAELR2	5063.89		4360.34
Q9WV75	Q9WV75	SPON2_RAT	Spon2	Spondin-2	1	GEAWALMK	GEAWALMK	2	GEAWALMK2	16433.1	17206.2	10328.4
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	GECEEMLSK	GEC(UniMod:4)EEMLSK	2	GEC(UniMod:4)EEMLSK2	1.23087e+06	1.26738e+06	1.35149e+06
D3ZZ26	D3ZZ26	D3ZZ26_RAT	Ppp1r3d	Protein phosphatase 1, regulatory subunit 3D	1	GECEESWIHFI	GEC(UniMod:4)EESWIHFI	2	GEC(UniMod:4)EESWIHFI2	72619.3	68822.7	98481.9
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	GECEVLK	GEC(UniMod:4)EVLK	2	GEC(UniMod:4)EVLK2	184051	233984	205121
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	GECLCGQCVCHSSDFGK	GEC(UniMod:4)LC(UniMod:4)GQC(UniMod:4)VC(UniMod:4)HSSDFGK	3	GEC(UniMod:4)LC(UniMod:4)GQC(UniMod:4)VC(UniMod:4)HSSDFGK3	17017.5	19264.7	11746.5
Q4KLH3	Q4KLH3	OGRL1_RAT	Ogfrl1	Opioid growth factor receptor-like protein 1	1	GECPTTSSEK	GEC(UniMod:4)PTTSSEK	2	GEC(UniMod:4)PTTSSEK2			5714.43
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	GECPWQAVLK	GEC(UniMod:4)PWQAVLK	2	GEC(UniMod:4)PWQAVLK2	1.15761e+06	1.0149e+06	934834
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	GECQSEGVLFFQGNR	GEC(UniMod:4)QSEGVLFFQGNR	2	GEC(UniMod:4)QSEGVLFFQGNR2	491214	434966	403714
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	GECQSEGVLFFQGNR	GEC(UniMod:4)QSEGVLFFQGNR	3	GEC(UniMod:4)QSEGVLFFQGNR3	97960.1	91282.2	104109
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	GECQSEGVLFFQGNRK	GEC(UniMod:4)QSEGVLFFQGNRK	2	GEC(UniMod:4)QSEGVLFFQGNRK2	22391.7	21860.5	32478.8
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	GECQSEGVLFFQGNRK	GEC(UniMod:4)QSEGVLFFQGNRK	3	GEC(UniMod:4)QSEGVLFFQGNRK3	803290	1.06808e+06	1.06569e+06
B2RYP8	B2RYP8	B2RYP8_RAT	Tubgcp2	Gamma-tubulin complex component	1	GECVGGSTLSLLHDR	GEC(UniMod:4)VGGSTLSLLHDR	3	GEC(UniMod:4)VGGSTLSLLHDR3	5127.88	7060.66	
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	GECVPGDR	GEC(UniMod:4)VPGDR	2	GEC(UniMod:4)VPGDR2		229767	
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	GECVPGDREVESTSFAR	GEC(UniMod:4)VPGDREVESTSFAR	2	GEC(UniMod:4)VPGDREVESTSFAR2	5953.64		2370.97
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	GECVPGDREVESTSFAR	GEC(UniMod:4)VPGDREVESTSFAR	3	GEC(UniMod:4)VPGDREVESTSFAR3	125470	123869	128077
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	GEDEDEVSEAQETPDHAIFR	GEDEDEVSEAQETPDHAIFR	3	GEDEDEVSEAQETPDHAIFR3	5265.19	4149.69	
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	GEDEEDNNLEVR	GEDEEDNNLEVR	2	GEDEEDNNLEVR2	151267	145206	136718
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	GEDEEDNNLEVR	GEDEEDNNLEVR	3	GEDEEDNNLEVR3	4985.11	5106.31	9458.76
Q7TPJ0	Q7TPJ0	SSRA_RAT	Ssr1	Translocon-associated protein subunit alpha	1	GEDFPANNIVK	GEDFPANNIVK	2	GEDFPANNIVK2	210904	192667	220549
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	GEDFYCVTCHETK	GEDFYC(UniMod:4)VTC(UniMod:4)HETK	2	GEDFYC(UniMod:4)VTC(UniMod:4)HETK2	46773.1	44072.6	51213.3
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	GEDFYCVTCHETK	GEDFYC(UniMod:4)VTC(UniMod:4)HETK	3	GEDFYC(UniMod:4)VTC(UniMod:4)HETK3	360479	334788	322196
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	GEDIVQR	GEDIVQR	2	GEDIVQR2	306697	380061	413286
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	GEDLEESGEHMGGALLIDLNR	GEDLEESGEHMGGALLIDLNR	3	GEDLEESGEHMGGALLIDLNR3	3050.02	4847.29	4339.35
D3Z8I2	D3Z8I2	D3Z8I2_RAT	Susd3	Sushi domain containing 3	1	GEDLETVQAAYLGLK	GEDLETVQAAYLGLK	2	GEDLETVQAAYLGLK2	41811.2	43882.6	40740
D3Z8I2	D3Z8I2	D3Z8I2_RAT	Susd3	Sushi domain containing 3	1	GEDLETVQAAYLGLK	GEDLETVQAAYLGLK	3	GEDLETVQAAYLGLK3	3593.49	7293.46	4471.06
F7EYK0	F7EYK0	F7EYK0_RAT	Fkbp5	peptidylprolyl isomerase	1	GEDLFEDSGIIR	GEDLFEDSGIIR	2	GEDLFEDSGIIR2	10759.6	5446.94	9459.06
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	GEDLQFDQLISSMSSVAEHCLPSLLR	GEDLQFDQLISSMSSVAEHC(UniMod:4)LPSLLR	3	GEDLQFDQLISSMSSVAEHC(UniMod:4)LPSLLR3	4246.83	4785.59	
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	GEDLTEDEDGGIIR	GEDLTEDEDGGIIR	2	GEDLTEDEDGGIIR2	6932.01	11407.9	9328.2
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	GEDLTEDEDGGIIRR	GEDLTEDEDGGIIRR	3	GEDLTEDEDGGIIRR3	16602.7	13835.8	12452.1
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	GEDPLAGDQNDHDMDSIAGVLK	GEDPLAGDQNDHDMDSIAGVLK	3	GEDPLAGDQNDHDMDSIAGVLK3	11384.7	19434.8	11402.2
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	GEDPLVDDQNER	GEDPLVDDQNER	2	GEDPLVDDQNER2	51451.9	34739.5	45089.6
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	GEDPLVDDQNERDINSVAGVLK	GEDPLVDDQNERDINSVAGVLK	3	GEDPLVDDQNERDINSVAGVLK3	36237	46034.3	42867.5
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	GEDPLVEGCTAHDLDSVAGVLK	GEDPLVEGC(UniMod:4)TAHDLDSVAGVLK	3	GEDPLVEGC(UniMod:4)TAHDLDSVAGVLK3	11325.5	10764.9	
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	GEDQEPIITHGK	GEDQEPIITHGK	3	GEDQEPIITHGK3	12673.3	18715.8	11650.2
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	GEDSVPDTVHHVVVPVNPK	GEDSVPDTVHHVVVPVNPK	3	GEDSVPDTVHHVVVPVNPK3	16521.6		
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	GEDSVPDTVHHVVVPVNPK	GEDSVPDTVHHVVVPVNPK	4	GEDSVPDTVHHVVVPVNPK4	14421.4	21236	25373.1
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	GEDVDQLITCIQSK	GEDVDQLITC(UniMod:4)IQSK	2	GEDVDQLITC(UniMod:4)IQSK2	49465.3	51623.4	38370.8
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	GEDVDQLITCIQSK	GEDVDQLITC(UniMod:4)IQSK	3	GEDVDQLITC(UniMod:4)IQSK3	9784.53	4114.48	7218.83
A0A8I6GK73	A0A8I6GK73	A0A8I6GK73_RAT	Copz1	Coatomer subunit zeta	1	GEDVPLTEQTVSQVLQSAK	GEDVPLTEQTVSQVLQSAK	3	GEDVPLTEQTVSQVLQSAK3	79173.9	60534.1	81662.1
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	GEDYVMTMPYAHCK	GEDYVMTMPYAHC(UniMod:4)K	3	GEDYVMTMPYAHC(UniMod:4)K3	3784.96	7299.26	5116.86
Q7TP42	Q7TP42	Q7TP42_RAT	Sec62	Translocation protein SEC62	1	GEEALFTTR	GEEALFTTR	2	GEEALFTTR2	37063.7	42871.4	57272.9
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	GEECQLCEVENR	GEEC(UniMod:4)QLC(UniMod:4)EVENR	2	GEEC(UniMod:4)QLC(UniMod:4)EVENR2	57784.1	64106.4	64997
P13838	P13838	LEUK_RAT	Spn	Leukosialin (Fragment)	1	GEEEPLVGSEDEAVETPTSDGPQAK	GEEEPLVGSEDEAVETPTSDGPQAK	3	GEEEPLVGSEDEAVETPTSDGPQAK3	77985.1	106634	91395.6
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	GEEETVTTLDYSHCSLEQVPK	GEEETVTTLDYSHC(UniMod:4)SLEQVPK	3	GEEETVTTLDYSHC(UniMod:4)SLEQVPK3	41600.8	45709.7	63540.1
B2GUZ6	B2GUZ6	B2GUZ6_RAT	Rtn4ip1	Reticulon 4 interacting protein 1	1	GEEFPLTLGR	GEEFPLTLGR	2	GEEFPLTLGR2	13572.5	10979.8	12468.8
P17945	P17945	HGF_RAT	Hgf	Hepatocyte growth factor	1	GEEGGPWCFTSNPEVR	GEEGGPWC(UniMod:4)FTSNPEVR	2	GEEGGPWC(UniMod:4)FTSNPEVR2	8859.12	9839.44	13778.9
Q6URK4	Q6URK4	ROA3_RAT	Hnrnpa3	Heterogeneous nuclear ribonucleoprotein A3	1	GEEGHDPKEPEQLR	GEEGHDPKEPEQLR	3	GEEGHDPKEPEQLR3	3170.97		
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	GEEILSGAQR	GEEILSGAQR	2	GEEILSGAQR2	77462	59265.2	75523.7
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	GEEIYSMDEGIR	GEEIYSMDEGIR	2	GEEIYSMDEGIR2	74404.5	90171.5	74013
Q63798	Q63798	PSME2_RAT	Psme2	Proteasome activator complex subunit 2	1	GEEKPSMY	GEEKPSMY	2	GEEKPSMY2	35702.4	36334.3	37211.5
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	GEELDEDLFLQLTGGHEAF	GEELDEDLFLQLTGGHEAF	3	GEELDEDLFLQLTGGHEAF3	13345.7	10139.4	11140.1
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	GEELEEEWGPVEK	GEELEEEWGPVEK	2	GEELEEEWGPVEK2	8909.62	13620.3	9732.74
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	GEELLSPLNLEQAAYAR	GEELLSPLNLEQAAYAR	2	GEELLSPLNLEQAAYAR2	154542	177646	153587
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	GEELLSPLNLEQAAYAR	GEELLSPLNLEQAAYAR	3	GEELLSPLNLEQAAYAR3	31843.7	35170.7	36597
B1PLB1	B1PLB1	B1PLB1_RAT	Cd34	CD34 molecule	1	GEELMQILCK	GEELMQILC(UniMod:4)K	2	GEELMQILC(UniMod:4)K2	953455	945698	964898
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	GEELPAEPK	GEELPAEPK	2	GEELPAEPK2	257101	246795	255897
D3ZAR1	D3ZAR1	ARH_RAT	Ldlrap1	Low density lipoprotein receptor adapter protein 1	1	GEELSAAAVK	GEELSAAAVK	2	GEELSAAAVK2	41067.5	40146.8	40596.3
G3V9A3	G3V9A3	G3V9A3_RAT	Sfn	Stratifin	1	GEELSCEER	GEELSC(UniMod:4)EER	2	GEELSC(UniMod:4)EER2	11634.1	9183.8	6909.34
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	GEELSEANVR	GEELSEANVR	2	GEELSEANVR2	154590	153915	158688
O88658	O88658;F1M4A4	KIF1B_RAT	Kif1b	Kinesin-like protein KIF1B	0	GEENLAGWRPR	GEENLAGWRPR	3	GEENLAGWRPR3	19301.3	28514	37750.8
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	GEENLMDAQVK	GEENLMDAQVK	2	GEENLMDAQVK2	358680	347600	322150
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	GEEPAEPEPEPTEAWK	GEEPAEPEPEPTEAWK	2	GEEPAEPEPEPTEAWK2	4525.56		
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	GEEPDVR	GEEPDVR	2	GEEPDVR2		258257	
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	GEEPDVRYDFEPYVSTNAWSPIMR	GEEPDVRYDFEPYVSTNAWSPIMR	3	GEEPDVRYDFEPYVSTNAWSPIMR3	21934.8	24508	21778.9
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	GEEPQDEEDHMDHDQERK	GEEPQDEEDHMDHDQERK	3	GEEPQDEEDHMDHDQERK3	8710.72		10261.9
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	GEEPQDEEDHMDHDQERK	GEEPQDEEDHMDHDQERK	4	GEEPQDEEDHMDHDQERK4	5450.07		7403.58
B4F7A3	B4F7A3	B4F7A3_RAT	Lgalsl	Galectin-like	1	GEEQSAIPYFPFIPDQPFR	GEEQSAIPYFPFIPDQPFR	3	GEEQSAIPYFPFIPDQPFR3	15077.8	11889.5	22236.2
Q6IRK9	Q6IRK9	CBPQ_RAT	Cpq	Carboxypeptidase Q	1	GEESAVMVVPR	GEESAVMVVPR	2	GEESAVMVVPR2	70132.1	69959.9	72041.5
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	GEESPVTR	GEESPVTR	2	GEESPVTR2	25262.6	29992.5	
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	GEESQEQPVSDSHQQQDESGK	GEESQEQPVSDSHQQQDESGK	3	GEESQEQPVSDSHQQQDESGK3	128579		5680.99
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	GEESVTLEQFR	GEESVTLEQFR	2	GEESVTLEQFR2	51793.4	49794.5	39558.7
M0RCI5	M0RCI5	M0RCI5_RAT	Pla2g12b	Phospholipase A2, group XIIB	1	GEESYSDWGLR	GEESYSDWGLR	2	GEESYSDWGLR2	11917.8	9077.17	10360.9
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	GEETPVIVGSALCALEQR	GEETPVIVGSALC(UniMod:4)ALEQR	2	GEETPVIVGSALC(UniMod:4)ALEQR2	40724.6	41656	62029.2
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	GEETPVIVGSALCALEQRDPELGVK	GEETPVIVGSALC(UniMod:4)ALEQRDPELGVK	3	GEETPVIVGSALC(UniMod:4)ALEQRDPELGVK3	12450.3	8275.86	17022.6
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	GEEVAFWTELLAK	GEEVAFWTELLAK	2	GEEVAFWTELLAK2	212923	200347	188301
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	GEEVTLSNPK	GEEVTLSNPK	2	GEEVTLSNPK2	18499.2	21928.4	14802.6
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	GEFAIEGYDVR	GEFAIEGYDVR	2	GEFAIEGYDVR2	1.2749e+06	1.30356e+06	1.45916e+06
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	GEFAIEGYDVR	GEFAIEGYDVR	3	GEFAIEGYDVR3	4246.5	4385.48	4323.81
B4F795	B4F795	CTL2_RAT	Slc44a2	Choline transporter-like protein 2	1	GEFCGQK	GEFC(UniMod:4)GQK	1	GEFC(UniMod:4)GQK1	13185.1	9970.25	11488.5
B4F795	B4F795	CTL2_RAT	Slc44a2	Choline transporter-like protein 2	1	GEFCGQK	GEFC(UniMod:4)GQK	2	GEFC(UniMod:4)GQK2	305393	351563	386687
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	GEFCSQGVR	GEFC(UniMod:4)SQGVR	2	GEFC(UniMod:4)SQGVR2	16769.8	12464.3	21448.6
F7EXP7	F7EXP7	F7EXP7_RAT	Snx7	Sorting nexin 7	1	GEFDSSEFEVR	GEFDSSEFEVR	2	GEFDSSEFEVR2	6288.28	4239.79	1541.03
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	GEFEAGFETGGQTR	GEFEAGFETGGQTR	2	GEFEAGFETGGQTR2	3111.35	3624.7	8633.68
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	GEFEGFVAMVNK	GEFEGFVAMVNK	2	GEFEGFVAMVNK2	12439	8775.53	9806.14
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	GEFELEESYDGR	GEFELEESYDGR	2	GEFELEESYDGR2			3479.95
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	GEFETGFEK	GEFETGFEK	2	GEFETGFEK2	30564.9	21575.5	29126.9
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	GEFFELIR	GEFFELIR	2	GEFFELIR2	176856	168078	169995
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	GEFFNELVGQQR	GEFFNELVGQQR	2	GEFFNELVGQQR2	255655	398216	341018
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	GEFFNELVGQQR	GEFFNELVGQQR	3	GEFFNELVGQQR3	55656.5	17820.1	37773
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	GEFGDVMLGDYR	GEFGDVMLGDYR	2	GEFGDVMLGDYR2	68151.6	35326.3	40684.4
Q71UF4	Q71UF4	RBBP7_RAT	Rbbp7	Histone-binding protein RBBP7	1	GEFGGFGSVTGK	GEFGGFGSVTGK	2	GEFGGFGSVTGK2	3417.74	2097.61	
Q641Y2	Q641Y2	NDUS2_RAT	Ndufs2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	1	GEFGVYLVSDGSSR	GEFGVYLVSDGSSR	2	GEFGVYLVSDGSSR2	15593.1	11319.6	9600.39
Q641Y2	Q641Y2	NDUS2_RAT	Ndufs2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	1	GEFGVYLVSDGSSRPYR	GEFGVYLVSDGSSRPYR	3	GEFGVYLVSDGSSRPYR3	13936.6	14056.5	11756.2
O88989	O88989	MDHC_RAT	Mdh1	Malate dehydrogenase, cytoplasmic	1	GEFITTVQQR	GEFITTVQQR	2	GEFITTVQQR2	99650	89927.4	127828
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GEFKCDPHEATCYDDGK	GEFKC(UniMod:4)DPHEATC(UniMod:4)YDDGK	3	GEFKC(UniMod:4)DPHEATC(UniMod:4)YDDGK3	9433.6		
M0RCS2	M0RCS2	M0RCS2_RAT	Tbl2	Transducin (beta)-like 2	1	GEFQEVLR	GEFQEVLR	2	GEFQEVLR2	9909.05	8337	
Q3KR92	Q3KR92	TPST1_RAT	Tpst1	Protein-tyrosine sulfotransferase 1	1	GEFQLPDFLK	GEFQLPDFLK	2	GEFQLPDFLK2	23063.7	24026.6	25129.6
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	GEFTIETEGK	GEFTIETEGK	2	GEFTIETEGK2	49360.3	30140.8	32429.8
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	GEFYNEASNLQVAIR	GEFYNEASNLQVAIR	2	GEFYNEASNLQVAIR2	14486.9	7670.14	14383.4
Q9Z1W6	Q9Z1W6	LYRIC_RAT	Mtdh	Protein LYRIC	1	GEGALPTGK	GEGALPTGK	1	GEGALPTGK1		810.934	3190.98
Q9Z1W6	Q9Z1W6	LYRIC_RAT	Mtdh	Protein LYRIC	1	GEGALPTGK	GEGALPTGK	2	GEGALPTGK2	65136.8	60444.7	48275
A0A0G2K0G9	A0A0G2K0G9	A0A0G2K0G9_RAT	Rin3	Ras and Rab interactor 3	1	GEGEEDEEKDGMRPR	GEGEEDEEKDGMRPR	3	GEGEEDEEKDGMRPR3	6031.58		3007.83
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	GEGEFWLGNDYLHLLTLR	GEGEFWLGNDYLHLLTLR	3	GEGEFWLGNDYLHLLTLR3	826441	1.16415e+06	616751
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	GEGEFWLGNDYLHLLTLR	GEGEFWLGNDYLHLLTLR	4	GEGEFWLGNDYLHLLTLR4	5527.29	6553.46	1668.68
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	GEGESPQAR	GEGESPQAR	2	GEGESPQAR2			126710
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	GEGEVCVK	GEGEVC(UniMod:4)VK	2	GEGEVC(UniMod:4)VK2	50271.3	56784.9	61456.5
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	GEGFDVMK	GEGFDVMK	2	GEGFDVMK2	82905.7	94318	88458
Q6AXS5	Q6AXS5	SERB1_RAT	Serbp1	SERPINE1 mRNA-binding protein 1	1	GEGGEFSVDRPIIER	GEGGEFSVDRPIIER	3	GEGGEFSVDRPIIER3	14934.8	3902.51	18530.9
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	GEGGILINSQGER	GEGGILINSQGER	2	GEGGILINSQGER2	76471.1	57754.9	81995.3
F7EWF8	F7EWF8	F7EWF8_RAT	Anapc2	Anaphase-promoting complex subunit 2	1	GEGGTDPELEGELDSR	GEGGTDPELEGELDSR	2	GEGGTDPELEGELDSR2	4684.17	5020.54	3154.76
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	GEGLAWGVHDCHPCAEHLGNSNR	GEGLAWGVHDC(UniMod:4)HPC(UniMod:4)AEHLGNSNR	3	GEGLAWGVHDC(UniMod:4)HPC(UniMod:4)AEHLGNSNR3	2587.25	4202.08	3166.17
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	GEGLAWGVHDCHPCAEHLGNSNR	GEGLAWGVHDC(UniMod:4)HPC(UniMod:4)AEHLGNSNR	4	GEGLAWGVHDC(UniMod:4)HPC(UniMod:4)AEHLGNSNR4	34743.4	35889.2	42610.6
Q6TUG0	Q6TUG0	DJB11_RAT	Dnajb11	DnaJ homolog subfamily B member 11	1	GEGLPNFDNNNIK	GEGLPNFDNNNIK	2	GEGLPNFDNNNIK2	83108.6	56435.8	68846.9
O35824	O35824	DNJA2_RAT	Dnaja2	DnaJ homolog subfamily A member 2	1	GEGMPQYR	GEGMPQYR	2	GEGMPQYR2	222460	268045	241431
P25093	P25093	FAAA_RAT	Fah	Fumarylacetoacetase	1	GEGMSQAATICR	GEGMSQAATIC(UniMod:4)R	2	GEGMSQAATIC(UniMod:4)R2	3434.23	4410.06	3046.84
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	GEGQLGAAER	GEGQLGAAER	2	GEGQLGAAER2	193275	159727	156823
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	GEGTGTLGSISLPLSELLQEEQLCLDR	GEGTGTLGSISLPLSELLQEEQLC(UniMod:4)LDR	3	GEGTGTLGSISLPLSELLQEEQLC(UniMod:4)LDR3	12558	5712.15	9206.47
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	GEGTLDLAWLK	GEGTLDLAWLK	2	GEGTLDLAWLK2	28254.7	18074	26195.9
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	GEGTPAAGDGLGK	GEGTPAAGDGLGK	2	GEGTPAAGDGLGK2	9394.88	6544.87	8456.14
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	GEGTPAAGDGLGKPLGPTPSQSR	GEGTPAAGDGLGKPLGPTPSQSR	3	GEGTPAAGDGLGKPLGPTPSQSR3	19615.7	15035.4	25367.9
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	GEGTPPYPYLPGICER	GEGTPPYPYLPGIC(UniMod:4)ER	2	GEGTPPYPYLPGIC(UniMod:4)ER2	20525.6	12272.8	7841.56
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	GEGVAGAVCASSK	GEGVAGAVC(UniMod:4)ASSK	2	GEGVAGAVC(UniMod:4)ASSK2	33761.3	35667.1	27449.7
A0A8I6ANB2	A0A8I6ANB2	A0A8I6ANB2_RAT	Ppfibp1	PPFIA binding protein 1	1	GEGVEILDRDENIK	GEGVEILDRDENIK	3	GEGVEILDRDENIK3	15947.2	17861	24535.3
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	GEGWGDPCELCPTEPDEAFR	GEGWGDPC(UniMod:4)ELC(UniMod:4)PTEPDEAFR	3	GEGWGDPC(UniMod:4)ELC(UniMod:4)PTEPDEAFR3	12494.4	17113	11792.3
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	GEGWGSPQATAMVLNNLMYMTAK	GEGWGSPQATAMVLNNLMYMTAK	3	GEGWGSPQATAMVLNNLMYMTAK3	4014.49		
Q9JM80	Q9JM80	PHAG1_RAT	Pag1	Phosphoprotein associated with glycosphingolipid-enriched microdomains 1	1	GEHGAEEQAPEAPSGHSK	GEHGAEEQAPEAPSGHSK	4	GEHGAEEQAPEAPSGHSK4	8639.42		
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	GEHLLHEPMEDSK	GEHLLHEPMEDSK	2	GEHLLHEPMEDSK2	11834.5	5542.65	4535.06
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	GEHLLHEPMEDSK	GEHLLHEPMEDSK	3	GEHLLHEPMEDSK3	60086.5	50445.7	53133.5
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	GEHLLHEPMEDSK	GEHLLHEPMEDSK	4	GEHLLHEPMEDSK4	156205	162968	194090
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	GEHLLHEPMEDSKK	GEHLLHEPMEDSKK	3	GEHLLHEPMEDSKK3	4743.62	3756.32	863.677
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	GEHLLHEPMEDSKK	GEHLLHEPMEDSKK	4	GEHLLHEPMEDSKK4	8375.2	5965.32	10257.2
P63159	A0A8I6GBU6;A0A8I6GKR4;P63159;D3ZLG3;A0A8I6A2H1;A0A8I5Y7D7;A0A0G2K6P4	HMGB1_RAT	Hmgb1	High mobility group protein B1	0	GEHPGLSIGDVAK	GEHPGLSIGDVAK	3	GEHPGLSIGDVAK3	32896.4	18098	27780.1
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	GEHSIVYLKPSYAFGSVGK	GEHSIVYLKPSYAFGSVGK	4	GEHSIVYLKPSYAFGSVGK4	17683.5	19787.1	21651.4
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	GEHTQNVPLSVTLATSPAQLPSADGADR	GEHTQNVPLSVTLATSPAQLPSADGADR	3	GEHTQNVPLSVTLATSPAQLPSADGADR3	37442.3	33659.5	24402.5
F7FHP0	F7FHP0	F7FHP0_RAT	Angptl3	Angiopoietin-like 3	1	GEHTSGVYTIR	GEHTSGVYTIR	3	GEHTSGVYTIR3	13530.5	6460.06	4820.45
F7FHP0	F7FHP0	F7FHP0_RAT	Angptl3	Angiopoietin-like 3	1	GEHTSGVYTIRPSSSQVFNVYCDTQSGTPR	GEHTSGVYTIRPSSSQVFNVYC(UniMod:4)DTQSGTPR	4	GEHTSGVYTIRPSSSQVFNVYC(UniMod:4)DTQSGTPR4	8134.18	12568.2	
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	GEIAEAYAELIK	GEIAEAYAELIK	2	GEIAEAYAELIK2	50628.1	51522.4	57071.6
A0A8I6A356	A0A8I6A356	A0A8I6A356_RAT	Ube2k	E2 ubiquitin-conjugating enzyme	1	GEIAGPPDTPYEGGR	GEIAGPPDTPYEGGR	2	GEIAGPPDTPYEGGR2	9898.02	6919.4	7121.53
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	GEIAVLEATVQNNQDER	GEIAVLEATVQNNQDER	2	GEIAVLEATVQNNQDER2	2161.15		
F7EYK0	F7EYK0	F7EYK0_RAT	Fkbp5	peptidylprolyl isomerase	1	GEICHLLCKPEYAYGSAGSLPK	GEIC(UniMod:4)HLLC(UniMod:4)KPEYAYGSAGSLPK	4	GEIC(UniMod:4)HLLC(UniMod:4)KPEYAYGSAGSLPK4	10071.5	3934.25	5540.94
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	GEIDAHEDSFK	GEIDAHEDSFK	2	GEIDAHEDSFK2	67881.4	60455.2	58943.5
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	GEIDAHEDSFK	GEIDAHEDSFK	3	GEIDAHEDSFK3	545728	606287	668126
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	GEIEELQHCLLQSGPPPADHPEAAETLR	GEIEELQHC(UniMod:4)LLQSGPPPADHPEAAETLR	4	GEIEELQHC(UniMod:4)LLQSGPPPADHPEAAETLR4	4949.83	7441.17	5931.96
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	GEIEHHCSGLHR	GEIEHHC(UniMod:4)SGLHR	3	GEIEHHC(UniMod:4)SGLHR3			12538.6
P62944	P52303;P62944;A0A8I6G475;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	GEIFELK	GEIFELK	2	GEIFELK2	62204.7	64717.8	51780.3
P33436	A0A8I6ABC2;P33436	MMP2_RAT	Mmp2	72 kDa type IV collagenase	0	GEIFFFK	GEIFFFK	2	GEIFFFK2			9093.89
Q6AXX6	Q6AXX6	PXL2A_RAT	Prxl2a	Peroxiredoxin-like 2A	1	GEIFLDEK	GEIFLDEK	2	GEIFLDEK2	130566	97884.2	99447.1
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	GEIFSTCGEEQK	GEIFSTC(UniMod:4)GEEQK	2	GEIFSTC(UniMod:4)GEEQK2	55955.1	53020.9	42329.7
Q5XI83	Q5XI83	VP35L_RAT	Vps35l	VPS35 endosomal protein-sorting factor-like	1	GEILARYTTTEK	GEILARYTTTEK	3	GEILARYTTTEK3	164711	77814.7	119725
B5DFE0	B5DFE0	B5DFE0_RAT	Pals2	Membrane palmitoylated protein 6	1	GEILQIVNR	GEILQIVNR	2	GEILQIVNR2	5195.9	5956.21	5888.54
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	GEIPNLLPEGSVDEDTK	GEIPNLLPEGSVDEDTK	2	GEIPNLLPEGSVDEDTK2	206657	154585	178898
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	GEIPNLLPEGSVDEDTK	GEIPNLLPEGSVDEDTK	3	GEIPNLLPEGSVDEDTK3	12091.2	10354.1	
A0A8I6AS17	A0A8I6AS17	A0A8I6AS17_RAT	Bsdc1	BSD domain containing 1	1	GEISELLVGSPSIR	GEISELLVGSPSIR	2	GEISELLVGSPSIR2	13386.1	16140.3	17173.7
D3ZJ86	D3ZJ86	SL9A6_RAT	Slc9a6	Sodium/hydrogen exchanger 6	1	GEISSHELNNVQDNEMLR	GEISSHELNNVQDNEMLR	3	GEISSHELNNVQDNEMLR3	5638.31	3321.33	3295.99
P70645	P70645	BLMH_RAT	Blmh	Bleomycin hydrolase	1	GEISSTQDAMMEEIFR	GEISSTQDAMMEEIFR	2	GEISSTQDAMMEEIFR2	1547.4	3054.26	2821.23
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	GEITPELLGVMR	GEITPELLGVMR	2	GEITPELLGVMR2	367519	375663	396448
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	GEITPELLGVMR	GEITPELLGVMR	3	GEITPELLGVMR3	12981.2	21499.6	15445.7
D4A0T9	D4A0T9	D4A0T9_RAT	Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	1	GEITSPSLSPDGR	GEITSPSLSPDGR	2	GEITSPSLSPDGR2	9186.91	6994.63	5815.39
O35547	O35547	ACSL4_RAT	Acsl4	Long-chain-fatty-acid--CoA ligase 4	1	GEIVIGGQNISMGYFK	GEIVIGGQNISMGYFK	2	GEIVIGGQNISMGYFK2	7333.02	8650.61	9491.21
O35264	O35264	PA1B2_RAT	Pafah1b2	Platelet-activating factor acetylhydrolase IB subunit alpha2	1	GEKPNPLR	GEKPNPLR	2	GEKPNPLR2	20561.7	14777.9	
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	GELANEVK	GELANEVK	1	GELANEVK1	65646.7	72590.4	56437.9
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	GELANEVK	GELANEVK	2	GELANEVK2	4.12678e+06	4.49077e+06	4.27135e+06
Q7TSU1	D4A631;Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	0	GELANFR	GELANFR	2	GELANFR2	105630	108961	93091.9
Q68FX0	Q68FX0	IDH3B_RAT	Idh3B	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	GELASYDMQLR	GELASYDMQLR	2	GELASYDMQLR2	92231.7	79552.6	99730.1
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	GELDAHLGLLGPYIR	GELDAHLGLLGPYIR	2	GELDAHLGLLGPYIR2	23720.1	21509.8	10162.3
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	GELDAHLGLLGPYIR	GELDAHLGLLGPYIR	3	GELDAHLGLLGPYIR3	289383	322000	280912
P21744	P21744	IBP4_RAT	Igfbp4	Insulin-like growth factor-binding protein 4	1	GELDCHQLADSLQE	GELDC(UniMod:4)HQLADSLQE	2	GELDC(UniMod:4)HQLADSLQE2	3898.41	3656.62	
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	GELEHSQQEEDGEEAMAGPPQGLFPGGK	GELEHSQQEEDGEEAMAGPPQGLFPGGK	3	GELEHSQQEEDGEEAMAGPPQGLFPGGK3	557981	655403	528099
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	GELEHSQQEEDGEEAMAGPPQGLFPGGK	GELEHSQQEEDGEEAMAGPPQGLFPGGK	4	GELEHSQQEEDGEEAMAGPPQGLFPGGK4	35825.1	23424.6	19646
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	GELEQPK	GELEQPK	2	GELEQPK2	65438.9	69413.8	73853.6
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	GELESSDQVR	GELESSDQVR	2	GELESSDQVR2	20764.3	13839.2	14068.3
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	GELEVLLEAAIDLSK	GELEVLLEAAIDLSK	3	GELEVLLEAAIDLSK3		3175.42	
P31325	P13286;P31325	PHKG2_RAT	Phkg2	Phosphorylase b kinase gamma catalytic chain, liver/testis isoform	0	GELFDYLTEK	GELFDYLTEK	2	GELFDYLTEK2	9174.65	16060.5	4063.14
Q64270	Q64270	EI2BA_RAT	Eif2b1	Translation initiation factor eIF-2B subunit alpha	1	GELFLSR	GELFLSR	2	GELFLSR2	23589.8	27878.6	21018.9
D3ZTX4	D3ZTX4	D3ZTX4_RAT	Mgam	Maltase-glucoamylase	1	GELFWDDGQSK	GELFWDDGQSK	2	GELFWDDGQSK2	9079.79	6477.74	6998.52
B1H282	B1H282	B1H282_RAT	Colgalt1	Collagen beta(1-O)galactosyltransferase 1	1	GELGCFLSHYNIWK	GELGC(UniMod:4)FLSHYNIWK	3	GELGC(UniMod:4)FLSHYNIWK3	9577.44	14816.5	9104.67
B0BN83	B0BN83	B0BN83_RAT	Armc1	Armadillo repeat-containing protein 1	1	GELGMMLSLQNVIQK	GELGMMLSLQNVIQK	2	GELGMMLSLQNVIQK2	5995.91	3428.41	5946.82
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	GELIEMNLQIVDR	GELIEMNLQIVDR	2	GELIEMNLQIVDR2		3436.6	
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	GELIHVFNK	GELIHVFNK	2	GELIHVFNK2	35174.6	36279.9	36507.1
Q499T5	Q499T5	Q499T5_RAT	Capn7	Calpain 7	1	GELLCSYSNNK	GELLC(UniMod:4)SYSNNK	2	GELLC(UniMod:4)SYSNNK2	4613.55	4198.78	4817.75
P07895	P07895	SODM_RAT	Sod2	Superoxide dismutase [Mn], mitochondrial	1	GELLEAIK	GELLEAIK	1	GELLEAIK1	8987.81	3853.22	4866.48
P07895	P07895	SODM_RAT	Sod2	Superoxide dismutase [Mn], mitochondrial	1	GELLEAIK	GELLEAIK	2	GELLEAIK2	1.28843e+06	1.20991e+06	1.24989e+06
P07895	P07895	SODM_RAT	Sod2	Superoxide dismutase [Mn], mitochondrial	1	GELLEAIKR	GELLEAIKR	2	GELLEAIKR2	139202	134698	103892
A0A8I5ZN89	A0A8I5ZN89	A0A8I5ZN89_RAT	Gcdh	Glutaryl-CoA dehydrogenase	1	GELLGCFGLTEPNHGSDPGSMETR	GELLGC(UniMod:4)FGLTEPNHGSDPGSMETR	3	GELLGC(UniMod:4)FGLTEPNHGSDPGSMETR3	15409.1	7164.45	11806
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	GELLLQLCR	GELLLQLC(UniMod:4)R	2	GELLLQLC(UniMod:4)R2	30495.3	62130	38941.3
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	GELLSSLDSFLDCSLVLPPTEAPSEK	GELLSSLDSFLDC(UniMod:4)SLVLPPTEAPSEK	3	GELLSSLDSFLDC(UniMod:4)SLVLPPTEAPSEK3	16448.6	6603.85	18309.3
Q5U2U2	Q5U2U2	CRKL_RAT	Crkl	Crk-like protein	1	GELLVIIEKPEEQWWSAR	GELLVIIEKPEEQWWSAR	3	GELLVIIEKPEEQWWSAR3	29103.3	14206.5	15528.3
Q5FWY5	Q5FWY5	AIP_RAT	Aip	AH receptor-interacting protein	1	GELPEFQDGTK	GELPEFQDGTK	2	GELPEFQDGTK2	17152.8		8249.57
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	GELQIVLR	GELQIVLR	2	GELQIVLR2	72708.3	70890.1	57352.1
A0A8I6A8Y6	A0A8I6A8Y6	A0A8I6A8Y6_RAT	Sf3b2	Splicing factor 3b, subunit 2	1	GELQLPPPPPPGHYGAWAAQELQAK	GELQLPPPPPPGHYGAWAAQELQAK	3	GELQLPPPPPPGHYGAWAAQELQAK3	8760.1	10386.3	
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	GELQNWPDLLPK	GELQNWPDLLPK	2	GELQNWPDLLPK2	68796.3	80959.8	82331.9
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	GELSGLLHQLQEK	GELSGLLHQLQEK	3	GELSGLLHQLQEK3	26378	26291.1	23768.7
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	GELSIVPR	GELSIVPR	2	GELSIVPR2	29264.1	19006.3	19971.8
D3ZHA0	D3ZHA0	FLNC_RAT	Flnc	Filamin-C	1	GELTGEVR	GELTGEVR	2	GELTGEVR2	816299	815976	922810
Q6TUD3	Q6TUD3	Q6TUD3_RAT	Rdh11	LRRGT00111	1	GELVASEIQATTGNSQVLVR	GELVASEIQATTGNSQVLVR	3	GELVASEIQATTGNSQVLVR3	21325.9	33808.7	26920.8
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	GELVDLSR	GELVDLSR	2	GELVDLSR2	66075.9	101798	79413.3
Q32PY5	Q32PY5	Q32PY5_RAT	Zdhhc6	Palmitoyltransferase	1	GELVLATR	GELVLATR	2	GELVLATR2	6553.25	9022.53	4625.22
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	GELVMQYK	GELVMQYK	2	GELVMQYK2	33340.6	41777.2	39545
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	GELVTNCFK	GELVTNC(UniMod:4)FK	2	GELVTNC(UniMod:4)FK2	52809.4	62689.8	51341.4
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	GELVVSLK	GELVVSLK	1	GELVVSLK1	12954.1	11616.4	5014.93
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	GELVVSLK	GELVVSLK	2	GELVVSLK2	651119	699060	731742
A0A8I6A6W3	A0A0G2KAE1;A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	0	GELYCLPCHDK	GELYC(UniMod:4)LPC(UniMod:4)HDK	2	GELYC(UniMod:4)LPC(UniMod:4)HDK2	161874	113688	119325
A0A8I6A6W3	A0A0G2KAE1;A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	0	GELYCLPCHDK	GELYC(UniMod:4)LPC(UniMod:4)HDK	3	GELYC(UniMod:4)LPC(UniMod:4)HDK3	662568	605156	623034
P08649	P08649	CO4_RAT	C4	Complement C4	1	GEMADKVATWLTHQGSFQGGFR	GEMADKVATWLTHQGSFQGGFR	3	GEMADKVATWLTHQGSFQGGFR3	17261.4	24509.1	31230.5
P08649	P08649	CO4_RAT	C4	Complement C4	1	GEMADKVATWLTHQGSFQGGFR	GEMADKVATWLTHQGSFQGGFR	4	GEMADKVATWLTHQGSFQGGFR4	94934	100228	108166
P21571	P21571	ATP5J_RAT	Atp5pf	ATP synthase-coupling factor 6, mitochondrial	1	GEMDKFPTFNFEDPK	GEMDKFPTFNFEDPK	2	GEMDKFPTFNFEDPK2	68909.5	104421	83066
P21571	P21571	ATP5J_RAT	Atp5pf	ATP synthase-coupling factor 6, mitochondrial	1	GEMDKFPTFNFEDPK	GEMDKFPTFNFEDPK	3	GEMDKFPTFNFEDPK3	102905	102165	129055
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	GEMGALPKPETILPPEPENGK	GEMGALPKPETILPPEPENGK	3	GEMGALPKPETILPPEPENGK3	30193.9	41278.5	22578.6
P04642	P04642;A0A8I6ASS6;A0A8I6A9V1;A0A8I6GK09	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	GEMMDLQHGSLFLK	GEMMDLQHGSLFLK	2	GEMMDLQHGSLFLK2	92286.7	76549	72740.8
P04642	P04642;A0A8I6ASS6;A0A8I6A9V1;A0A8I6GK09	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	GEMMDLQHGSLFLK	GEMMDLQHGSLFLK	3	GEMMDLQHGSLFLK3	1.16756e+06	1.15832e+06	1.18351e+06
P42123	P42123	LDHB_RAT	Ldhb	L-lactate dehydrogenase B chain	1	GEMMDLQHGSLFLQTPK	GEMMDLQHGSLFLQTPK	3	GEMMDLQHGSLFLQTPK3	21467	5404.29	13870.7
B2RYI5	B2RYI5	B2RYI5_RAT	Ankrd40	Ankyrin repeat domain 40	1	GEMPVQLTSR	GEMPVQLTSR	2	GEMPVQLTSR2	3655.54		
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	GEMSATPAGFAHLTHFLMGLAGGK	GEMSATPAGFAHLTHFLMGLAGGK	3	GEMSATPAGFAHLTHFLMGLAGGK3	8833.89	10017.4	7811.28
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	GEMSATPAGFAHLTHFLMGLAGGK	GEMSATPAGFAHLTHFLMGLAGGK	4	GEMSATPAGFAHLTHFLMGLAGGK4	9778.58	19343.5	5768.44
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	GEMSLAEVQCHLDK	GEMSLAEVQC(UniMod:4)HLDK	3	GEMSLAEVQC(UniMod:4)HLDK3	3884.17	8512.47	6433.55
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	GEMTTYFLNGGPSS	GEMTTYFLNGGPSS	2	GEMTTYFLNGGPSS2	9518.79	15813.2	17936.7
P28037	A0A8I5ZRH3;P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	0	GENCIAAGR	GENC(UniMod:4)IAAGR	2	GENC(UniMod:4)IAAGR2	6744.1	9533.29	8463.1
P00787	P00787	CATB_RAT	Ctsb	Cathepsin B	1	GENHCGIESEIVAGIPR	GENHC(UniMod:4)GIESEIVAGIPR	2	GENHC(UniMod:4)GIESEIVAGIPR2	1724.44		2478.62
P00787	P00787	CATB_RAT	Ctsb	Cathepsin B	1	GENHCGIESEIVAGIPR	GENHC(UniMod:4)GIESEIVAGIPR	3	GENHC(UniMod:4)GIESEIVAGIPR3	88967.1	86968	84679.4
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	GENLAIGFDIYK	GENLAIGFDIYK	2	GENLAIGFDIYK2	76872.2	78095.8	64029.7
Q9WUF4	Q9WUF4	VAMP8_RAT	Vamp8	Vesicle-associated membrane protein 8	1	GENLDHLR	GENLDHLR	2	GENLDHLR2	55212.2	57401.3	50916.3
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	GENLGLEFR	GENLGLEFR	2	GENLGLEFR2	86200.6	84185.3	83128.3
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	GENQLYCYEVTPQQPALSPVTQCILENALR	GENQLYC(UniMod:4)YEVTPQQPALSPVTQC(UniMod:4)ILENALR	4	GENQLYC(UniMod:4)YEVTPQQPALSPVTQC(UniMod:4)ILENALR4	15074.7	8633.99	17259.2
Q6AXQ4	Q6AXQ4	MTM1_RAT	Mtm1	Myotubularin	1	GENSYGLDITCK	GENSYGLDITC(UniMod:4)K	2	GENSYGLDITC(UniMod:4)K2	6831.06	1683.67	5575.24
A0A8I5ZTB8	A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	GENSYGLETVCK	GENSYGLETVC(UniMod:4)K	2	GENSYGLETVC(UniMod:4)K2	15429.9	25033.4	16002.2
P58751	P58751	RELN_RAT	Reln	Reelin	1	GENVQFQWK	GENVQFQWK	2	GENVQFQWK2	52727.8	67821.4	104764
P97849	P97849	S27A1_RAT	Slc27a1	Long-chain fatty acid transport protein 1	1	GENVSTTEVEAVLSR	GENVSTTEVEAVLSR	2	GENVSTTEVEAVLSR2	2029.2	4217.22	819.223
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	GENVSTTEVEGTLSR	GENVSTTEVEGTLSR	2	GENVSTTEVEGTLSR2	27978.4	27086.9	33718.8
F1M086	F1M7K9;F1M086	F1M086_RAT	Elp4	Elongator complex protein 4	0	GEPCFLSCGYMK	GEPC(UniMod:4)FLSC(UniMod:4)GYMK	2	GEPC(UniMod:4)FLSC(UniMod:4)GYMK2	18854.1	14856.7	18379
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	GEPESNTVTAAIK	GEPESNTVTAAIK	2	GEPESNTVTAAIK2	79406.3	93248.6	95125.8
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	GEPGPPDCDSPLFLPYK	GEPGPPDC(UniMod:4)DSPLFLPYK	2	GEPGPPDC(UniMod:4)DSPLFLPYK2	36696.2	39960.4	30883
P19999	P19999;P08661;Q7TMC0	MBL1_RAT	Mbl1	Mannose-binding protein A	0	GEPGQGLR	GEPGQGLR	2	GEPGQGLR2	55556.8	43050.4	47955.1
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	GEPLHIVNSSDVSDGTLLTMLFIK	GEPLHIVNSSDVSDGTLLTMLFIK	3	GEPLHIVNSSDVSDGTLLTMLFIK3	4081.7	2866.38	
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	GEPNNVAGNQAQVK	GEPNNVAGNQAQVK	2	GEPNNVAGNQAQVK2	33710.4	24113.6	30271.5
B0LT89	B0LT89	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	1	GEPPHSELHPMK	GEPPHSELHPMK	3	GEPPHSELHPMK3	76636.7	59262.2	67692.5
Q6P9U8	Q6P9U8	EIF3H_RAT	Eif3h	Eukaryotic translation initiation factor 3 subunit H	1	GEPPLPEEDLSK	GEPPLPEEDLSK	2	GEPPLPEEDLSK2	203826	215052	250129
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	GEPPMSEMTSVR	GEPPMSEMTSVR	2	GEPPMSEMTSVR2	40867	36447.6	26747.4
A0A8I6GBQ0	A0A8I6GBQ0	A0A8I6GBQ0_RAT	Stk26	Protein kinase domain-containing protein	1	GEPPNSDMHPMR	GEPPNSDMHPMR	3	GEPPNSDMHPMR3	60085.4	63310.7	63592.2
D3ZXD8	D3ZXD8	TM245_RAT	Tmem245	Transmembrane protein 245	1	GEPPPAPSASSSSSSR	GEPPPAPSASSSSSSR	2	GEPPPAPSASSSSSSR2	47246.2	42689.5	78623.2
Q62632	Q62632	FSTL1_RAT	Fstl1	Follistatin-related protein 1	1	GEPTCLCIEQCKPHK	GEPTC(UniMod:4)LC(UniMod:4)IEQC(UniMod:4)KPHK	4	GEPTC(UniMod:4)LC(UniMod:4)IEQC(UniMod:4)KPHK4	20686.4	22177.1	22834
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	GEPTEGFNHLVVDER	GEPTEGFNHLVVDER	2	GEPTEGFNHLVVDER2		3893.48	4911.27
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	GEPTEGFNHLVVDER	GEPTEGFNHLVVDER	3	GEPTEGFNHLVVDER3	31725	32542	53476
A0A0G2JX20	A0A0G2JX20	A0A0G2JX20_RAT	Katnb1	Katanin p80 WD40 repeat-containing subunit B1	1	GEPVIIPATR	GEPVIIPATR	2	GEPVIIPATR2	8958.43	9879.37	
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	GEPVTNLVPSMVSLEETK	GEPVTNLVPSMVSLEETK	2	GEPVTNLVPSMVSLEETK2	20148.8	17378	15204.4
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	GEPWTFLVR	GEPWTFLVR	2	GEPWTFLVR2	59223.3	46118.5	45683.3
D4AAT7	D4AAT7	NNRD_RAT	Naxd	ATP-dependent (S)-NAD(P)H-hydrate dehydratase	1	GEQDLISNGQQVLVCNQEGSSR	GEQDLISNGQQVLVC(UniMod:4)NQEGSSR	3	GEQDLISNGQQVLVC(UniMod:4)NQEGSSR3	2753.21		
Q76GL9	Q76GL9	Q76GL9_RAT	Slc1a4	Amino acid transporter	1	GEQELQEVK	GEQELQEVK	2	GEQELQEVK2	716.654	2381.18	5121.29
Q62740	Q62740	SPP24_RAT	Spp2	Secreted phosphoprotein 24	1	GEQFYDR	GEQFYDR	2	GEQFYDR2	17893	19730.5	16138.8
A0A8I5ZY29	A0A8I5ZY29	A0A8I5ZY29_RAT	Usp14	Ubiquitin carboxyl-terminal hydrolase	1	GEQGQYLQQDANECWIQMMR	GEQGQYLQQDANEC(UniMod:4)WIQMMR	3	GEQGQYLQQDANEC(UniMod:4)WIQMMR3	4942	3769.64	4912.45
Q9ESS6	Q9ESS6	BCAM_RAT	Bcam	Basal cell adhesion molecule	1	GEQIALDCTPR	GEQIALDC(UniMod:4)TPR	2	GEQIALDC(UniMod:4)TPR2	3339.89		1602.59
P08650	P08650	CO5_RAT	C5	Complement C5	1	GEQIQLK	GEQIQLK	1	GEQIQLK1	8283.52	7664.98	10871.8
P08650	P08650	CO5_RAT	C5	Complement C5	1	GEQIQLK	GEQIQLK	2	GEQIQLK2	878263	754006	703486
Q9QZG1	Q9QZG1	S22AN_RAT	Slc22a23	Solute carrier family 22 member 23	1	GEQPLLLTNAELK	GEQPLLLTNAELK	2	GEQPLLLTNAELK2	9779.64	9070.49	10519.7
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	GEQQYLAAPLVMLR	GEQQYLAAPLVMLR	2	GEQQYLAAPLVMLR2	587868	607054	573163
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	GEQQYLAAPLVMLR	GEQQYLAAPLVMLR	3	GEQQYLAAPLVMLR3	16301.4	17622.4	19448.7
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	GEQSTGENSLEDLTK	GEQSTGENSLEDLTK	2	GEQSTGENSLEDLTK2	35228.5	31285.6	41942.8
Q6IUP3	Q6IUP3	ELP5_RAT	Elp5	Elongator complex protein 5	1	GEQVHVLGCEVSEEEFR	GEQVHVLGC(UniMod:4)EVSEEEFR	3	GEQVHVLGC(UniMod:4)EVSEEEFR3	4449.9	8651.62	
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	GERDSQTQAILTK	GERDSQTQAILTK	3	GERDSQTQAILTK3	7845.46	4464.87	8846.54
P27590	P27590	UROM_RAT	Umod	Uromodulin	1	GERDWMSIVTPAR	GERDWMSIVTPAR	3	GERDWMSIVTPAR3	4937.77	6351.26	
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	GERLDLLLDDPIHSPTVPR	GERLDLLLDDPIHSPTVPR	3	GERLDLLLDDPIHSPTVPR3	1558.74	3355.58	1040.45
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	GERLDLLLDDPIHSPTVPR	GERLDLLLDDPIHSPTVPR	4	GERLDLLLDDPIHSPTVPR4	5520.28	7099.23	11760.7
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	GESAGLVK	GESAGLVK	1	GESAGLVK1	53808.2	46023.8	44562.7
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	GESAGLVK	GESAGLVK	2	GESAGLVK2	2.78874e+06	2.88348e+06	2.86135e+06
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	GESAILVENTK	GESAILVENTK	2	GESAILVENTK2	37568.5	62903.8	49099.3
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	GESAMWQQR	GESAMWQQR	2	GESAMWQQR2	65378.7	58849	80598.6
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	GESCDIPHCTDNCGFPHR	GESC(UniMod:4)DIPHC(UniMod:4)TDNC(UniMod:4)GFPHR	3	GESC(UniMod:4)DIPHC(UniMod:4)TDNC(UniMod:4)GFPHR3	24918.1	22089.9	19840.1
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	GESCDIPHCTDNCGFPHR	GESC(UniMod:4)DIPHC(UniMod:4)TDNC(UniMod:4)GFPHR	4	GESC(UniMod:4)DIPHC(UniMod:4)TDNC(UniMod:4)GFPHR4	61456	60574.2	58516
B5DFN2	D3ZWL6;B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	0	GESEDDFWWCIDR	GESEDDFWWC(UniMod:4)IDR	2	GESEDDFWWC(UniMod:4)IDR2	61731.6	62920	63437.9
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	GESFEVGSK	GESFEVGSK	1	GESFEVGSK1	2684.03	2642.72	
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	GESFEVGSK	GESFEVGSK	2	GESFEVGSK2	107488	107595	104527
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	GESFYQDR	GESFYQDR	2	GESFYQDR2	90820.6	75975.8	73828.7
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	GESGGAVFLER	GESGGAVFLER	2	GESGGAVFLER2	36648.7	40825.4	24897.2
G3V6R7	G3V6R7	G3V6R7_RAT	Oxsm	3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial	1	GESGIVSVVGDEYK	GESGIVSVVGDEYK	2	GESGIVSVVGDEYK2	14736.6	9346.19	11337.1
P83868	P83868	TEBP_RAT	Ptges3	Prostaglandin E synthase 3	1	GESGQSWPR	GESGQSWPR	2	GESGQSWPR2	299093	342466	358128
Q5HZA4	Q5HZA4	LYSM1_RAT	Lysmd1	LysM and putative peptidoglycan-binding domain-containing protein 1	1	GESGVPEEDTGLYPSSPR	GESGVPEEDTGLYPSSPR	2	GESGVPEEDTGLYPSSPR2	2645.87		1077.72
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	GESLADSVQTMSCYADVVVLR	GESLADSVQTMSC(UniMod:4)YADVVVLR	3	GESLADSVQTMSC(UniMod:4)YADVVVLR3		4540.62	2724.93
P47875	P47875	CSRP1_RAT	Csrp1	Cysteine and glycine-rich protein 1	1	GESLGIK	GESLGIK	1	GESLGIK1		1414.28	2575.67
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	GESLMEWAENVMQIHADR	GESLMEWAENVMQIHADR	3	GESLMEWAENVMQIHADR3		3201.79	3719.03
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	GESLMEWAENVMQIHADRK	GESLMEWAENVMQIHADRK	4	GESLMEWAENVMQIHADRK4	8291.93	4377.16	6219.88
Q62833	Q62833	GRK5_RAT	Grk5	G protein-coupled receptor kinase 5	1	GESMALNEK	GESMALNEK	2	GESMALNEK2	12468.7	9595.59	10291.2
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	GESPPHTFCK	GESPPHTFC(UniMod:4)K	3	GESPPHTFC(UniMod:4)K3	17254.5	42205.1	17496.1
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	GESPVASPFQNYSSIHSQSR	GESPVASPFQNYSSIHSQSR	3	GESPVASPFQNYSSIHSQSR3	10454.2	12935.2	
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	GESPVDYDGGR	GESPVDYDGGR	2	GESPVDYDGGR2	23600	23549.7	20447.9
P97689	P97689	UT1_RAT	Slc14a1	Urea transporter 1	1	GESQILSCR	GESQILSC(UniMod:4)R	2	GESQILSC(UniMod:4)R2	138301	111801	144791
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	GESQTDIEITR	GESQTDIEITR	2	GESQTDIEITR2	30075.5	28937.1	33660.1
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	GESQTDIEITREEDFTR	GESQTDIEITREEDFTR	3	GESQTDIEITREEDFTR3	119794	96906.3	136768
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	GESSEKPAIVFMYR	GESSEKPAIVFMYR	3	GESSEKPAIVFMYR3	17266.8	14216	22153
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	GESSSSSPATPIK	GESSSSSPATPIK	2	GESSSSSPATPIK2	2466.87	2382.22	3980.47
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	GESSVSVDGK	GESSVSVDGK	2	GESSVSVDGK2	26633.1	38160.9	44162.6
P62074	P62074	TIM10_RAT	Timm10	Mitochondrial import inner membrane translocase subunit Tim10	1	GESVCLDR	GESVC(UniMod:4)LDR	2	GESVC(UniMod:4)LDR2	43459	49827.7	61118.4
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	GESVITEEMNGK	GESVITEEMNGK	2	GESVITEEMNGK2	6775.06	7225.02	7158.04
O35244	O35244	PRDX6_RAT	Prdx6	Peroxiredoxin-6	1	GESVMVLPTLPEEEAK	GESVMVLPTLPEEEAK	2	GESVMVLPTLPEEEAK2	28748.6	16722.8	31639.8
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	GESVQEELLK	GESVQEELLK	2	GESVQEELLK2	51879.9	63646.2	58073.9
A0A8I6GIL4	A0A8I6GIL4	A0A8I6GIL4_RAT	Tmem87a	Transmembrane protein 87A	1	GESVQNALVLAELLSAVK	GESVQNALVLAELLSAVK	2	GESVQNALVLAELLSAVK2	2642		2880.33
B2RYW9	B2RYW9	FAHD2_RAT	Fahd2	Fumarylacetoacetate hydrolase domain-containing protein 2	1	GETALSVAR	GETALSVAR	2	GETALSVAR2	28650	45967	32296.5
D3ZDK7	D3ZDK7	PGP_RAT	Pgp	Glycerol-3-phosphate phosphatase	1	GETAVPGAPETLR	GETAVPGAPETLR	2	GETAVPGAPETLR2	37877.4	17997.4	30173.5
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	GETDLIQK	GETDLIQK	2	GETDLIQK2	13665.1	9049.63	3522.02
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	GETESEEFEK	GETESEEFEK	2	GETESEEFEK2	120040	91492.5	103101
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	GETGFIR	GETGFIR	2	GETGFIR2	455276	483435	535037
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	GETHEEVHSVLHFK	GETHEEVHSVLHFK	2	GETHEEVHSVLHFK2	147840	107075	96527.8
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	GETHEEVHSVLHFK	GETHEEVHSVLHFK	3	GETHEEVHSVLHFK3	11190	962003	837334
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	GETHEEVHSVLHFK	GETHEEVHSVLHFK	4	GETHEEVHSVLHFK4	68505.6	66817.1	79974.8
B5DF55	B5DF55	B5DF55_RAT	Stam	Signal transducing adaptor molecule	1	GETHQGMGLFPSNFVTADLTAEPEMIK	GETHQGMGLFPSNFVTADLTAEPEMIK	3	GETHQGMGLFPSNFVTADLTAEPEMIK3	11371.9		6808.66
Q64270	Q64270	EI2BA_RAT	Eif2b1	Translation initiation factor eIF-2B subunit alpha	1	GETIQGLR	GETIQGLR	2	GETIQGLR2	14775.4	13087	6313.59
P0C5W1	P0C5W1	MAP1S_RAT	Map1s	Microtubule-associated protein 1S	1	GETLETLVLLNPSDK	GETLETLVLLNPSDK	2	GETLETLVLLNPSDK2	19134.8	21859.9	6763.42
Q9Z2F5	Q9Z2F5	CTBP1_RAT	Ctbp1	C-terminal-binding protein 1	1	GETLGIIGLGR	GETLGIIGLGR	2	GETLGIIGLGR2	18685.5	9790.82	14622.4
P54777	P54777	PEX6_RAT	Pex6	Peroxisomal ATPase PEX6	1	GETLPVPGSR	GETLPVPGSR	2	GETLPVPGSR2	35606	44722.6	36044.8
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	GETMEVIEKPENDPEWWK	GETMEVIEKPENDPEWWK	3	GETMEVIEKPENDPEWWK3	75042.9	102714	83357.3
E9PU37	E9PU37	E9PU37_RAT	Zdhhc13	Palmitoyltransferase	1	GETPLDMAVQNK	GETPLDMAVQNK	2	GETPLDMAVQNK2	45226.3	42785.3	41257.9
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	GETQNILQK	GETQNILQK	2	GETQNILQK2	89807.6	85891.6	72413.9
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	GETSGNESDAEYLPK	GETSGNESDAEYLPK	2	GETSGNESDAEYLPK2	9970.86	11191.2	8436.76
Q5HZY0	Q5HZY0	UBXN4_RAT	Ubxn4	UBX domain-containing protein 4	1	GETSVTNDK	GETSVTNDK	2	GETSVTNDK2			19088.5
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	GETTLLNK	GETTLLNK	1	GETTLLNK1	3669.58	8491.18	2894.1
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	GETTLLNK	GETTLLNK	2	GETTLLNK2	279016	253158	242423
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	GETTLWNPGCDHAGIATQVVVEK	GETTLWNPGC(UniMod:4)DHAGIATQVVVEK	3	GETTLWNPGC(UniMod:4)DHAGIATQVVVEK3	54303.5	49192.7	47582.8
D3Z9L0	D3Z9L0	D3Z9L0_RAT	Agk	Acylglycerol kinase, mitochondrial	1	GETVPLDVLQIK	GETVPLDVLQIK	2	GETVPLDVLQIK2	21870.9	32952.1	35767.9
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	GETVWTVMVSHPQNPSTQCYQNR	GETVWTVMVSHPQNPSTQC(UniMod:4)YQNR	3	GETVWTVMVSHPQNPSTQC(UniMod:4)YQNR3	114486	96091.2	123427
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	GETYDECVLEGR	GETYDEC(UniMod:4)VLEGR	2	GETYDEC(UniMod:4)VLEGR2	10771.8	7071.76	9110.73
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	GEVAYIDGQVLVPPGYGQDVR	GEVAYIDGQVLVPPGYGQDVR	3	GEVAYIDGQVLVPPGYGQDVR3	19526.2	30351.6	19833.5
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	GEVCNMISK	GEVC(UniMod:4)NMISK	2	GEVC(UniMod:4)NMISK2	15724.3	13706.9	13565.7
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	GEVEQMDSR	GEVEQMDSR	2	GEVEQMDSR2	66940.2	80227.9	125036
O35094	O35094	TIM44_RAT	Timm44	Mitochondrial import inner membrane translocase subunit TIM44	1	GEVFDGDPDK	GEVFDGDPDK	2	GEVFDGDPDK2	8026.39	5473.88	7751.98
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	GEVFSVLEFAPSNHSFK	GEVFSVLEFAPSNHSFK	2	GEVFSVLEFAPSNHSFK2	73861.2	68542.3	71775.7
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	GEVFSVLEFAPSNHSFK	GEVFSVLEFAPSNHSFK	3	GEVFSVLEFAPSNHSFK3	217530	221693	249381
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	GEVFSVLEFAPSNHSFKK	GEVFSVLEFAPSNHSFKK	3	GEVFSVLEFAPSNHSFKK3	9792.95	15068.6	12609.9
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	GEVFSVLEFAPSNHSFKK	GEVFSVLEFAPSNHSFKK	4	GEVFSVLEFAPSNHSFKK4	16095.2	31952.1	26883.9
A0A8I6AVC5	A0A8I6AVC5	A0A8I6AVC5_RAT	Ltbp3	Latent transforming growth factor beta binding protein 3	1	GEVGADCPQGYK	GEVGADC(UniMod:4)PQGYK	2	GEVGADC(UniMod:4)PQGYK2	2503.5	4167.14	4851.16
Q64057	Q64057	AL7A1_RAT	Aldh7a1	Alpha-aminoadipic semialdehyde dehydrogenase	1	GEVITTYCPANNEPIAR	GEVITTYC(UniMod:4)PANNEPIAR	2	GEVITTYC(UniMod:4)PANNEPIAR2	6013.78	3560.74	1710.62
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	GEVLEGSNAYYCEK	GEVLEGSNAYYC(UniMod:4)EK	2	GEVLEGSNAYYC(UniMod:4)EK2	19878	20756	24914.7
D3ZM21	D3ZM21	D3ZM21_RAT	Comtd1	Catechol-O-methyltransferase domain containing 1	1	GEVLQPQPK	GEVLQPQPK	2	GEVLQPQPK2	23632.9	26151.8	34825.9
O54783	O54783	CHKB_RAT	Chkb	Choline/ethanolamine kinase	1	GEVLSEEEQK	GEVLSEEEQK	2	GEVLSEEEQK2	4186.56		6916.82
M0R8V0	A0A8I6A3T8;M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	0	GEVLTFK	GEVLTFK	2	GEVLTFK2	16896.3	18255.1	12484.9
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	GEVPAELR	GEVPAELR	2	GEVPAELR2	11186	11489.2	6668.1
D4AC93	D4AC93	D4AC93_RAT	Tmem223	Transmembrane protein 223	1	GEVPAMLPLK	GEVPAMLPLK	2	GEVPAMLPLK2	28065.9	26229.7	18535.9
Q06647	Q06647	ATPO_RAT	Atp5po	ATP synthase subunit O, mitochondrial	1	GEVPCTVTTAFPLDEAVLSELK	GEVPC(UniMod:4)TVTTAFPLDEAVLSELK	3	GEVPC(UniMod:4)TVTTAFPLDEAVLSELK3	51461.6	46127.4	84336.6
Q3ZAU4	Q3ZAU4	Q3ZAU4_RAT	Kazald1	Kazal-type serine peptidase inhibitor domain 1	1	GEVPEPLCVCR	GEVPEPLC(UniMod:4)VC(UniMod:4)R	2	GEVPEPLC(UniMod:4)VC(UniMod:4)R2	46089.2	75021.4	95957.4
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	GEVPMEGNLLEVACHCSSLR	GEVPMEGNLLEVAC(UniMod:4)HC(UniMod:4)SSLR	3	GEVPMEGNLLEVAC(UniMod:4)HC(UniMod:4)SSLR3	32569.4	46452.8	43892.6
Q923S8	Q923S8	PANK4_RAT	Pank4	4'-phosphopantetheine phosphatase	1	GEVQALFLR	GEVQALFLR	2	GEVQALFLR2		4063.63	2671.56
A0A0G2K3K5	O88419;A0A0G2K3K5	A0A0G2K3K5_RAT	B4galt5	Beta-1,4-galactosyltransferase	0	GEVQFLGR	GEVQFLGR	2	GEVQFLGR2	27938.2	28249	29935.6
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	GEVSGQVGLFPSNYVK	GEVSGQVGLFPSNYVK	2	GEVSGQVGLFPSNYVK2	25769.7	26970.5	22842.8
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	GEVSVALK	GEVSVALK	2	GEVSVALK2	29663.2	29428.6	31302.4
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	GEVTFEDVR	GEVTFEDVR	2	GEVTFEDVR2	49534.7	60372.4	54873.2
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	GEVTQAQNTLK	GEVTQAQNTLK	2	GEVTQAQNTLK2	74293.7	75811.8	27711.3
P62489	P62489	RPB7_RAT	Polr2g	DNA-directed RNA polymerase II subunit RPB7	1	GEVVDAVVTQVNK	GEVVDAVVTQVNK	2	GEVVDAVVTQVNK2	4901.03	4892.51	4864.02
Q03555	Q03555	GEPH_RAT	Gphn	Gephyrin	1	GEVVDVMVIGR	GEVVDVMVIGR	2	GEVVDVMVIGR2	10488.9	9580.78	
D3ZV56	D3ZV56	D3ZV56_RAT	Rnf150	Ring finger protein 150	1	GEVVMASSVHDR	GEVVMASSVHDR	3	GEVVMASSVHDR3	5347.09	1679.27	4254.46
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	GEVVNYSDSR	GEVVNYSDSR	2	GEVVNYSDSR2	113870	100713	88625.3
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	GEVWQLLAGCHNNDHLVEK	GEVWQLLAGC(UniMod:4)HNNDHLVEK	3	GEVWQLLAGC(UniMod:4)HNNDHLVEK3	14042.5	13445.8	21747.4
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	GEVWQLLAGCHNNDHLVEK	GEVWQLLAGC(UniMod:4)HNNDHLVEK	4	GEVWQLLAGC(UniMod:4)HNNDHLVEK4	35163.7	45014.8	29608
P18395	P18395	CSDE1_RAT	Csde1	Cold shock domain-containing protein E1	1	GEVYPFGIVGMANK	GEVYPFGIVGMANK	2	GEVYPFGIVGMANK2	23541.2	23691.8	36445.3
O55156	O55156;Q9JK25	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	0	GEWCGVELDEPLGK	GEWC(UniMod:4)GVELDEPLGK	2	GEWC(UniMod:4)GVELDEPLGK2	119295	100879	117543
P98105	P98105	LYAM2_RAT	Sele	E-selectin	1	GEWDSEKPTCAGVQCSSLDLPGK	GEWDSEKPTC(UniMod:4)AGVQC(UniMod:4)SSLDLPGK	3	GEWDSEKPTC(UniMod:4)AGVQC(UniMod:4)SSLDLPGK3	26504.1	37359.8	27383.2
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	GEWFLLGSPGS	GEWFLLGSPGS	2	GEWFLLGSPGS2		2835.83	4664.59
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	GEWIKPGAVVIDCGINYVPDDTKPNGR	GEWIKPGAVVIDC(UniMod:4)GINYVPDDTKPNGR	4	GEWIKPGAVVIDC(UniMod:4)GINYVPDDTKPNGR4	13016.5	19721.3	13910.8
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GEWTCKPIAEK	GEWTC(UniMod:4)KPIAEK	2	GEWTC(UniMod:4)KPIAEK2	4.58177e+06	4.00011e+06	4.61346e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GEWTCKPIAEK	GEWTC(UniMod:4)KPIAEK	3	GEWTC(UniMod:4)KPIAEK3	28899.7	30829.5	3.84352e+07
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	GEYDMAAR	GEYDMAAR	2	GEYDMAAR2	20110.1	15829.8	25939.1
P36876	P56932;P36877;P36876	2ABA_RAT	Ppp2r2a	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	0	GEYNVYSTFQSHEPEFDYLK	GEYNVYSTFQSHEPEFDYLK	3	GEYNVYSTFQSHEPEFDYLK3	40628.4	33966.4	52214.1
O89035	O89035	DIC_RAT	Slc25a10	Mitochondrial dicarboxylate carrier	1	GEYQGVFHCAVETAK	GEYQGVFHC(UniMod:4)AVETAK	3	GEYQGVFHC(UniMod:4)AVETAK3	27195	30521.9	26490
D3ZBT4	D3ZBT4	D3ZBT4_RAT	Mtf1	Metal-regulatory transcription factor 1	1	GEYTFVCNQEGCGK	GEYTFVC(UniMod:4)NQEGC(UniMod:4)GK	2	GEYTFVC(UniMod:4)NQEGC(UniMod:4)GK2	2486.9	1928.2	
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	GEYTLVVK	GEYTLVVK	1	GEYTLVVK1	14798.7	8271.56	12009.7
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	GEYTLVVK	GEYTLVVK	2	GEYTLVVK2	1.11946e+06	1.02387e+06	1.26841e+06
D3ZKN1	D3ZKN1	D3ZKN1_RAT	Bpifa6	BPI fold containing family A, member 6	1	GEYTNLGDAIGK	GEYTNLGDAIGK	2	GEYTNLGDAIGK2	12736.6	9701.7	10102
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	GEYWAEHPTIK	GEYWAEHPTIK	2	GEYWAEHPTIK2	2223.33		
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	GEYWAEHPTIK	GEYWAEHPTIK	3	GEYWAEHPTIK3	6175.42	12457	4372.69
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	GEYWECK	GEYWEC(UniMod:4)K	1	GEYWEC(UniMod:4)K1	2048.38	2053.82	4586.32
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	GEYWECK	GEYWEC(UniMod:4)K	2	GEYWEC(UniMod:4)K2	50101	34147	45520.6
D4A0G9	D4A0G9	D4A0G9_RAT	Ercc6l	ERCC excision repair 6 like, spindle assembly checkpoint helicase	1	GFAADNEAVQK	GFAADNEAVQK	2	GFAADNEAVQK2	11785	13900	9480.5
F1LS35	F1LS35	F1LS35_RAT	Hps5	Hermansky-Pudlak syndrome 5 protein homolog	1	GFAAISNTSSLPEK	GFAAISNTSSLPEK	2	GFAAISNTSSLPEK2	4563.43	5008.48	
Q9ERE6	Q9ERE6	MPRIP_RAT	Mprip	Myosin phosphatase Rho-interacting protein	1	GFAAMEETHQK	GFAAMEETHQK	3	GFAAMEETHQK3	6965.96	5639.5	5859.53
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	GFAAQFIK	GFAAQFIK	2	GFAAQFIK2	6894.64	8098.09	
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	GFAATEFFR	GFAATEFFR	2	GFAATEFFR2	44596.6	43891.2	44769.9
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	GFADQFLFEYSSNYGQAPLPLLVGYTK	GFADQFLFEYSSNYGQAPLPLLVGYTK	4	GFADQFLFEYSSNYGQAPLPLLVGYTK4	9484.32		
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	GFADSERK	GFADSERK	2	GFADSERK2	51297.1		51504.9
Q5RK09	Q5RK09	EIF3G_RAT	Eif3g	Eukaryotic translation initiation factor 3 subunit G	1	GFAFISFHR	GFAFISFHR	2	GFAFISFHR2	9040.92	31607.7	
Q6URK4	D4A6A2;E9PSU5;F1M6C7;Q6URK4	ROA3_RAT	Hnrnpa3	Heterogeneous nuclear ribonucleoprotein A3	0	GFAFVTFDDHDTVDK	GFAFVTFDDHDTVDK	3	GFAFVTFDDHDTVDK3	5600.06	3041.39	7842.69
P62997	P62997;A0A8I6AB81	TRA2B_RAT	Tra2b	Transformer-2 protein homolog beta	0	GFAFVYFENVDDAK	GFAFVYFENVDDAK	2	GFAFVYFENVDDAK2	26836.5	49195.6	34398.8
A0A8J8Y9E0	A0A8J8Y9E0	A0A8J8Y9E0_RAT	Tra2a	Transformer 2 alpha homolog	1	GFAFVYFER	GFAFVYFER	2	GFAFVYFER2	1706.86	4318.49	4406.86
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	GFALVGLGVR	GFALVGLGVR	2	GFALVGLGVR2	53993	57889	44293.8
D3ZG58	D3ZG58	D3ZG58_RAT	Zwilch	Protein zwilch	1	GFAQFELFK	GFAQFELFK	2	GFAQFELFK2	1343.18	2831.07	4621.77
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	GFAVVEIR	GFAVVEIR	2	GFAVVEIR2	4103.78	13391.7	8856.28
B5DF48	B5DF48	B5DF48_RAT	Tyw1	tRNA 4-demethylwyosine synthase (AdoMet-dependent)	1	GFAVVLAK	GFAVVLAK	2	GFAVVLAK2	9432.15	5127.14	
Q7TP47	Q566E4;Q7TP47;A0A8I5ZQ92	HNRPQ_RAT	Syncrip	Heterogeneous nuclear ribonucleoprotein Q	0	GFCFLEYEDHK	GFC(UniMod:4)FLEYEDHK	3	GFC(UniMod:4)FLEYEDHK3	15537.3	11882.1	7186.89
P07335	P07335	KCRB_RAT	Ckb	Creatine kinase B-type	1	GFCLPPHCSR	GFC(UniMod:4)LPPHC(UniMod:4)SR	3	GFC(UniMod:4)LPPHC(UniMod:4)SR3	36808	80994.5	33422.2
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	GFCLQYGAALIYTSVKEEK	GFC(UniMod:4)LQYGAALIYTSVKEEK	3	GFC(UniMod:4)LQYGAALIYTSVKEEK3	7706.66		
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	GFCQIQVK	GFC(UniMod:4)QIQVK	2	GFC(UniMod:4)QIQVK2	12610.8	13887.7	9061.02
G3V6N7	G3V6N7	G3V6N7_RAT	Slc12a6	Solute carrier family 12, member 6	1	GFCQLVVAAK	GFC(UniMod:4)QLVVAAK	2	GFC(UniMod:4)QLVVAAK2	11835.7	8642.87	8077.64
Q63632	Q63632	S12A4_RAT	Slc12a4	Solute carrier family 12 member 4	1	GFCQVVVASK	GFC(UniMod:4)QVVVASK	2	GFC(UniMod:4)QVVVASK2	6068.02	3232.93	2266.45
P15473	P15473	IBP3_RAT	Igfbp3	Insulin-like growth factor-binding protein 3	1	GFCWCVDK	GFC(UniMod:4)WC(UniMod:4)VDK	2	GFC(UniMod:4)WC(UniMod:4)VDK2	26123.1	18007.1	16303.4
Q5XI72	Q5XI72	IF4H_RAT	Eif4h	Eukaryotic translation initiation factor 4H	1	GFCYVEFDEVDSLK	GFC(UniMod:4)YVEFDEVDSLK	2	GFC(UniMod:4)YVEFDEVDSLK2	9550.13	6404.48	7467.11
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	GFDCGLEAK	GFDC(UniMod:4)GLEAK	2	GFDC(UniMod:4)GLEAK2	21326.3	19164.5	19660
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	GFDCSEMSCPNDCHQHGR	GFDC(UniMod:4)SEMSC(UniMod:4)PNDC(UniMod:4)HQHGR	3	GFDC(UniMod:4)SEMSC(UniMod:4)PNDC(UniMod:4)HQHGR3	309933	317877	278935
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	GFDCSEMSCPNDCHQHGR	GFDC(UniMod:4)SEMSC(UniMod:4)PNDC(UniMod:4)HQHGR	4	GFDC(UniMod:4)SEMSC(UniMod:4)PNDC(UniMod:4)HQHGR4	1.32361e+06	1.57698e+06	1.49946e+06
P17945	P17945	HGF_RAT	Hgf	Hepatocyte growth factor	1	GFDDNYCR	GFDDNYC(UniMod:4)R	2	GFDDNYC(UniMod:4)R2	5245.27		
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	GFDETLAK	GFDETLAK	2	GFDETLAK2	29472.9	29245.8	39513.3
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	GFDILGIK	GFDILGIK	2	GFDILGIK2	3971.72		
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	GFDILGIKPVQR	GFDILGIKPVQR	3	GFDILGIKPVQR3	76092.3	75069.9	90410.4
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	GFDPNQISVATLLFEGDREK	GFDPNQISVATLLFEGDREK	3	GFDPNQISVATLLFEGDREK3	27778.5	21342.8	15944.3
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	GFDPVSTVLHELTFQAMAYDLLPIEK	GFDPVSTVLHELTFQAMAYDLLPIEK	3	GFDPVSTVLHELTFQAMAYDLLPIEK3	5490.18		
Q9Z0J5	Q9Z0J5	TRXR2_RAT	Txnrd2	Thioredoxin reductase 2, mitochondrial	1	GFDQQMASLVTEHMESHGTR	GFDQQMASLVTEHMESHGTR	4	GFDQQMASLVTEHMESHGTR4	10347.1	11567.1	14537.9
B2RZB6	B2RZB6	B2RZB6_RAT	Lsm8	U6 snRNA-associated Sm-like protein LSm8	1	GFDQTINLILDESHER	GFDQTINLILDESHER	3	GFDQTINLILDESHER3	12330.4	6016.85	7678.66
Q5XXR3	Q5XXR3	ARHG6_RAT	Arhgef6	Rho guanine nucleotide exchange factor 6	1	GFDTAPLTK	GFDTAPLTK	2	GFDTAPLTK2	17782.4	19718.5	22102.6
O55043	O55043	ARHG7_RAT	Arhgef7	Rho guanine nucleotide exchange factor 7	1	GFDTTAINK	GFDTTAINK	2	GFDTTAINK2	29147	27123.4	25672.5
P08461	A0A8I6B5J2;P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	0	GFDVASVMSVTLSCDHR	GFDVASVMSVTLSC(UniMod:4)DHR	3	GFDVASVMSVTLSC(UniMod:4)DHR3	16638.9	9376.52	9646.18
Q8K1Q0	A0A8I5ZWZ4;Q8K1Q0	NMT1_RAT	Nmt1	Glycylpeptide N-tetradecanoyltransferase 1	0	GFDVFNALDLMENK	GFDVFNALDLMENK	2	GFDVFNALDLMENK2		15777.8	18991.2
P06760	P06760	BGLR_RAT	Gusb	Beta-glucuronidase	1	GFDWPLLIK	GFDWPLLIK	2	GFDWPLLIK2	13346.4	20445.8	20077.9
Q5XIN4	Q5XIN4	Q5XIN4_RAT	Mtmr9	Myotubularin related protein 9	1	GFEALIER	GFEALIER	2	GFEALIER2	66744	83843.3	76508.5
A0A8I6AMS6	A0A8I6AMS6	A0A8I6AMS6_RAT	Rangap1	RAN GTPase activating protein 1	1	GFEALLK	GFEALLK	2	GFEALLK2	21901.8	20130.4	24317.8
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	GFEDDQIEALLHK	GFEDDQIEALLHK	3	GFEDDQIEALLHK3	19328.3	19036.2	16027.2
D3ZA85	D3ZA85	D3ZA85_RAT	Nfu1	NFU1 iron-sulfur cluster scaffold homolog, mitochondrial	1	GFEDGIVR	GFEDGIVR	2	GFEDGIVR2	26615.5	20942.1	16722.3
D3ZQ77	D3ZQ77	D3ZQ77_RAT	C10h5orf15	Similar to HTGN29 protein; keratinocytes associated transmembrane protein 2	1	GFEDSVQVVK	GFEDSVQVVK	2	GFEDSVQVVK2	3822.46	4430.39	6940.09
P97519	P97519	HMGCL_RAT	Hmgcl	Hydroxymethylglutaryl-CoA lyase, mitochondrial	1	GFEEAVAAGAK	GFEEAVAAGAK	2	GFEEAVAAGAK2	1940.78	3115.79	3641.61
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	GFEESEPLTGFLTTVPDGPTQLR	GFEESEPLTGFLTTVPDGPTQLR	3	GFEESEPLTGFLTTVPDGPTQLR3	131433	205648	145761
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	GFEEVIK	GFEEVIK	2	GFEEVIK2	167917	170387	196215
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	GFEFSVPFTEMK	GFEFSVPFTEMK	2	GFEFSVPFTEMK2	218287	239082	246026
A1L108	A1L108	ARP5L_RAT	Arpc5l	Actin-related protein 2/3 complex subunit 5-like protein	1	GFEKPTENSSAVLLQWHEK	GFEKPTENSSAVLLQWHEK	3	GFEKPTENSSAVLLQWHEK3	9724.61	9114.22	7403.48
A1L108	A1L108	ARP5L_RAT	Arpc5l	Actin-related protein 2/3 complex subunit 5-like protein	1	GFEKPTENSSAVLLQWHEK	GFEKPTENSSAVLLQWHEK	4	GFEKPTENSSAVLLQWHEK4	21309.4	20578.4	24342.7
Q641Y0	Q641Y0	OST48_RAT	Ddost	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit	1	GFELTFK	GFELTFK	1	GFELTFK1	8088.28	3121.88	6484.76
Q641Y0	Q641Y0	OST48_RAT	Ddost	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit	1	GFELTFK	GFELTFK	2	GFELTFK2	314204	297884	326732
A0A8I5Y661	A0A8I5Y661	A0A8I5Y661_RAT	Fam177a1	Family with sequence similarity 177, member A1	1	GFENVELGVMGK	GFENVELGVMGK	2	GFENVELGVMGK2	34610.1	46009.7	30498.5
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	GFEPGVTNILK	GFEPGVTNILK	2	GFEPGVTNILK2	123374	110884	115665
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GFEPTLEALFGK	GFEPTLEALFGK	2	GFEPTLEALFGK2	2.1934e+06	2.53142e+06	2.59479e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GFEPTLEALFGK	GFEPTLEALFGK	3	GFEPTLEALFGK3	4116.48	2065.87	
Q4KLF8	Q4KLF8	ARPC5_RAT	Arpc5	Actin-related protein 2/3 complex subunit 5	1	GFESPSDNSSAMLLQWHEK	GFESPSDNSSAMLLQWHEK	3	GFESPSDNSSAMLLQWHEK3	457831	381733	459141
A0A8I5ZTB8	A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	GFEVLVEK	GFEVLVEK	2	GFEVLVEK2	13276.1	13027.2	12126.9
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	GFEVVYMTEPIDEYCVQQLK	GFEVVYMTEPIDEYC(UniMod:4)VQQLK	3	GFEVVYMTEPIDEYC(UniMod:4)VQQLK3	60072.6	53735.9	50999.3
Q63072	Q63072	BST1_RAT	Bst1	ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 2	1	GFFADFEIPYLQK	GFFADFEIPYLQK	2	GFFADFEIPYLQK2	8082.96	8466.93	9835.29
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	GFFAVYEAICGGDVK	GFFAVYEAIC(UniMod:4)GGDVK	2	GFFAVYEAIC(UniMod:4)GGDVK2			5856.49
D4A435	D4A435	D4A435_RAT	Icam5	Intercellular adhesion molecule 5	1	GFFCDAALDVDGETLRK	GFFC(UniMod:4)DAALDVDGETLRK	3	GFFC(UniMod:4)DAALDVDGETLRK3	2743.97		
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	GFFDPNTEENLTYLQLK	GFFDPNTEENLTYLQLK	3	GFFDPNTEENLTYLQLK3	5101.19		2338.93
P30427	A0A8I6AHY5;P30427	PLEC_RAT	Plec	Plectin	0	GFFDPNTHENLTYLQLLER	GFFDPNTHENLTYLQLLER	3	GFFDPNTHENLTYLQLLER3	4921.54		4615.17
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	GFFEGSIASK	GFFEGSIASK	2	GFFEGSIASK2	474413	500463	508244
A0A8I6A8L3	A0A8I6A8L3	A0A8I6A8L3_RAT	Dnpep	Aspartyl aminopeptidase	1	GFFELFPSVSR	GFFELFPSVSR	2	GFFELFPSVSR2	45517.6	43481.6	49167.1
Q7TSE9	Q7TSE9	HAX1_RAT	Hax1	HCLS1-associated protein X-1	1	GFFGFPGPR	GFFGFPGPR	2	GFFGFPGPR2	9394.17	5258.04	7003.81
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	GFFGGLETK	GFFGGLETK	2	GFFGGLETK2	234019	250874	253284
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	GFFGPDCTQCPGGFSNPCYGK	GFFGPDC(UniMod:4)TQC(UniMod:4)PGGFSNPC(UniMod:4)YGK	3	GFFGPDC(UniMod:4)TQC(UniMod:4)PGGFSNPC(UniMod:4)YGK3	4284.11	2709.14	1776.83
P32089	P32089	TXTP_RAT	Slc25a1	Tricarboxylate transport protein, mitochondrial	1	GFFHGVR	GFFHGVR	2	GFFHGVR2	21278.2	10405.8	10275.4
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	GFFICDQPYEPVSPYSCK	GFFIC(UniMod:4)DQPYEPVSPYSC(UniMod:4)K	3	GFFIC(UniMod:4)DQPYEPVSPYSC(UniMod:4)K3	10457.8	5213.78	10544
A0A8I5ZN24	A0A8I5ZN24	A0A8I5ZN24_RAT	Dhrs7	Dehydrogenase/reductase 7	1	GFFNALHSELGK	GFFNALHSELGK	2	GFFNALHSELGK2	8584.75	7387.07	9117.84
A0A8I5ZN24	A0A8I5ZN24	A0A8I5ZN24_RAT	Dhrs7	Dehydrogenase/reductase 7	1	GFFNALHSELGK	GFFNALHSELGK	3	GFFNALHSELGK3	89667.3	96726.2	82746.5
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	GFFNIYHPFDPVAYR	GFFNIYHPFDPVAYR	2	GFFNIYHPFDPVAYR2	5048.63	4427.81	5603.78
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	GFFNIYHPFDPVAYR	GFFNIYHPFDPVAYR	3	GFFNIYHPFDPVAYR3	30865	32367.7	26582.3
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	GFFNIYHPLDPVAYR	GFFNIYHPLDPVAYR	2	GFFNIYHPLDPVAYR2	22063.8	19044.5	19189
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	GFFNIYHPLDPVAYR	GFFNIYHPLDPVAYR	3	GFFNIYHPLDPVAYR3	59898.7	70607.8	69812.7
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	GFFREETDHLIK	GFFREETDHLIK	3	GFFREETDHLIK3	8134.84	9133.81	
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	GFFSSLK	GFFSSLK	2	GFFSSLK2	27127.4		28071.3
D3ZQI6	D3ZQI6	D3ZQI6_RAT	Xpo4	Exportin 4	1	GFFTQHAVQVFNSYIQCHLAAPDGTR	GFFTQHAVQVFNSYIQC(UniMod:4)HLAAPDGTR	4	GFFTQHAVQVFNSYIQC(UniMod:4)HLAAPDGTR4	4627.57	10914.1	4350.62
A0A8I6ACU2	A0A8I6ACU2	A0A8I6ACU2_RAT	Ubap2l	Ubiquitin associated protein 2-like	1	GFGDVGEAK	GFGDVGEAK	2	GFGDVGEAK2	26226.3	15524.4	26193
P81155	P81155	VDAC2_RAT	Vdac2	Voltage-dependent anion-selective channel protein 2	1	GFGFGLVK	GFGFGLVK	2	GFGFGLVK2	807580	845876	942094
P47875	P47875	CSRP1_RAT	Csrp1	Cysteine and glycine-rich protein 1	1	GFGFGQGAGALVHSE	GFGFGQGAGALVHSE	2	GFGFGQGAGALVHSE2	234884	195733	218558
Q9EPH8	D4A233;B5DF80;Q9EPH8;D3ZAS7;G3V9N0	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	0	GFGFVCFSSPEEATK	GFGFVC(UniMod:4)FSSPEEATK	2	GFGFVC(UniMod:4)FSSPEEATK2	39861.5	36050.4	41815.8
Q9EPH8	D4A233;B5DF80;Q9EPH8	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	0	GFGFVSFER	GFGFVSFER	2	GFGFVSFER2	117264	102329	106615
A0A8I6AQW7	A0A8I6AQW7	A0A8I6AQW7_RAT	Msi2	Musashi RNA-binding protein 2	1	GFGFVTFADPASVDK	GFGFVTFADPASVDK	2	GFGFVTFADPASVDK2	26220.4	27889	26691.2
A7VJC2	A7VJC2;A0A8I5Y7P1	ROA2_RAT	Hnrnpa2b1	Heterogeneous nuclear ribonucleoproteins A2/B1	0	GFGFVTFDDHDPVDK	GFGFVTFDDHDPVDK	3	GFGFVTFDDHDPVDK3	11471.3	10610.4	
A0A8I6AQW7	A0A8I6AQW7	A0A8I6AQW7_RAT	Msi2	Musashi RNA-binding protein 2	1	GFGFVTFENEDVVEK	GFGFVTFENEDVVEK	2	GFGFVTFENEDVVEK2	15043.8	11987	9655.13
P04256	P04256	ROA1_RAT	Hnrnpa1	Heterogeneous nuclear ribonucleoprotein A1	1	GFGFVTYATVEEVDAAMNAR	GFGFVTYATVEEVDAAMNAR	3	GFGFVTYATVEEVDAAMNAR3	12542.6	5291.57	4106.2
M0R3L8	M0R3L8	M0R3L8_RAT	Gba	Glucosylceramidase	1	GFGGAMTDATALNILALSPPAQK	GFGGAMTDATALNILALSPPAQK	3	GFGGAMTDATALNILALSPPAQK3	3184.36	6945.1	
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	GFGGIGGILR	GFGGIGGILR	2	GFGGIGGILR2	331887	350447	317713
D4A3E2	D4A3E2	D4A3E2_RAT	Npepl1	Aminopeptidase-like 1	1	GFGGIYGVGK	GFGGIYGVGK	2	GFGGIYGVGK2	28080.2	38203.5	36407
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	GFGGLTGK	GFGGLTGK	1	GFGGLTGK1	10897.8	12222.2	7480.66
P58751	P58751	RELN_RAT	Reln	Reelin	1	GFGGPFCVPVVPLPSILK	GFGGPFC(UniMod:4)VPVVPLPSILK	2	GFGGPFC(UniMod:4)VPVVPLPSILK2	45986.7	57651.8	48792.4
P58751	P58751	RELN_RAT	Reln	Reelin	1	GFGGPFCVPVVPLPSILK	GFGGPFC(UniMod:4)VPVVPLPSILK	3	GFGGPFC(UniMod:4)VPVVPLPSILK3	12704.2	17205.8	17021.2
F7F5Q9	F7F5Q9	F7F5Q9_RAT	Hcls1	Hematopoietic cell specific Lyn substrate 1	1	GFGGQYGIQK	GFGGQYGIQK	2	GFGGQYGIQK2	202189	173115	187275
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	GFGHLLQR	GFGHLLQR	2	GFGHLLQR2	269070	240785	205806
Q6TEK3	Q6TEK3	VKORL_RAT	Vkorc1l1	Vitamin K epoxide reductase complex subunit 1-like protein 1	1	GFGLLGSIFGK	GFGLLGSIFGK	2	GFGLLGSIFGK2	35366.6	45972.5	33037.2
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	GFGNIATNEDTK	GFGNIATNEDTK	2	GFGNIATNEDTK2	65565.5	1.80413e+07	1.98665e+07
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	GFGNIATNEDTK	GFGNIATNEDTK	3	GFGNIATNEDTK3	1732.9	3324.06	7437.96
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	GFGNIATNEDTKK	GFGNIATNEDTKK	2	GFGNIATNEDTKK2	3.27674e+06	3.1068e+06	3.48637e+06
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	GFGNIATNEDTKK	GFGNIATNEDTKK	3	GFGNIATNEDTKK3	33574.7	30956.1	32120.7
P48037	P48037	ANXA6_RAT	Anxa6	Annexin A6	1	GFGSDKESILELITSR	GFGSDKESILELITSR	3	GFGSDKESILELITSR3	2689.8		3747.91
Q27W01	Q27W01	RBM8A_RAT	Rbm8a	RNA-binding protein 8A	1	GFGSEEGSR	GFGSEEGSR	2	GFGSEEGSR2	18860.9	15947.2	14983.6
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	GFGSLNDK	GFGSLNDK	1	GFGSLNDK1	138317	121997	137194
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	GFGSLNDK	GFGSLNDK	2	GFGSLNDK2	9.12844e+06	8.80386e+06	9.85948e+06
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	GFGSLNDKGEGEFWLGNDYLHLLTLR	GFGSLNDKGEGEFWLGNDYLHLLTLR	4	GFGSLNDKGEGEFWLGNDYLHLLTLR4	22552.3	23662.8	30370.8
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	GFGSSVPEGLIEPDSMASAASALHLLSPR	GFGSSVPEGLIEPDSMASAASALHLLSPR	3	GFGSSVPEGLIEPDSMASAASALHLLSPR3	19093.9	30685.9	32790.5
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	GFGSSWK	GFGSSWK	2	GFGSSWK2	38684.6	38397.3	32923.2
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	GFGTDEQAIIDCLGSR	GFGTDEQAIIDC(UniMod:4)LGSR	2	GFGTDEQAIIDC(UniMod:4)LGSR2	88057.6	106025	68709.3
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	GFGTDEQAIIDCLGSR	GFGTDEQAIIDC(UniMod:4)LGSR	3	GFGTDEQAIIDC(UniMod:4)LGSR3	20578.1	18854.4	21417.3
Q6IRJ7	Q6IRJ7	Q6IRJ7_RAT	Anxa7	Annexin	1	GFGTDEQAIVDVVSNR	GFGTDEQAIVDVVSNR	2	GFGTDEQAIVDVVSNR2	29923.7	32931	39503
Q6IRJ7	Q6IRJ7	Q6IRJ7_RAT	Anxa7	Annexin	1	GFGTDEQAIVDVVSNR	GFGTDEQAIVDVVSNR	3	GFGTDEQAIVDVVSNR3	31616.7	34867.5	36499
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	GFGVENMATAMDEDLEEELDEKDEK	GFGVENMATAMDEDLEEELDEKDEK	3	GFGVENMATAMDEDLEEELDEKDEK3	10783.7		
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	GFGVQPAR	GFGVQPAR	2	GFGVQPAR2	15673.1	22735.5	20993.4
B5DF45	B5DF45	TRAF6_RAT	Traf6	TNF receptor-associated factor 6	1	GFGYVTFMHLEALR	GFGYVTFMHLEALR	3	GFGYVTFMHLEALR3	3286.12	6721.14	8421.5
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	GFHCESSAHWPIFK	GFHC(UniMod:4)ESSAHWPIFK	3	GFHC(UniMod:4)ESSAHWPIFK3	9677.44	2905.93	7103.29
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	GFHCESSAHWPIFK	GFHC(UniMod:4)ESSAHWPIFK	4	GFHC(UniMod:4)ESSAHWPIFK4	43891.5	37704.2	31969.2
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	GFHMVTNESPLK	GFHMVTNESPLK	3	GFHMVTNESPLK3	13893.2	12767.8	16011.7
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	GFHQVPFASTVFIER	GFHQVPFASTVFIER	2	GFHQVPFASTVFIER2	7148.56		4074.42
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	GFHQVPFASTVFIER	GFHQVPFASTVFIER	3	GFHQVPFASTVFIER3	29679.7	26659.5	39919
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	GFHTEADVDSLHATIECEQPQPDLYK	GFHTEADVDSLHATIEC(UniMod:4)EQPQPDLYK	4	GFHTEADVDSLHATIEC(UniMod:4)EQPQPDLYK4	77862.7	79703.1	61006.5
P97686	P97686	NRCAM_RAT	Nrcam	Neuronal cell adhesion molecule	1	GFHTPEGVPSAPSSLK	GFHTPEGVPSAPSSLK	3	GFHTPEGVPSAPSSLK3	7123	3838.66	8957.3
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	GFHVVEVTYDDAPIPNSPFK	GFHVVEVTYDDAPIPNSPFK	3	GFHVVEVTYDDAPIPNSPFK3	18032.9	12889.7	19586.1
Q68FP9	Q68FP9	COG6_RAT	Cog6	Conserved oligomeric Golgi complex subunit 6	1	GFIDALTR	GFIDALTR	2	GFIDALTR2	50280.5	56281	49534.5
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	GFIDDDK	GFIDDDK	2	GFIDDDK2	28244.4	36918.3	31688
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	GFIFLASLR	GFIFLASLR	2	GFIFLASLR2	5.49428e+06	6.26073e+06	5.80882e+06
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	GFIGPGIDVPAPDMSTGER	GFIGPGIDVPAPDMSTGER	2	GFIGPGIDVPAPDMSTGER2	64717.4	50838.3	73895.4
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	GFIGPGIDVPAPDMSTGER	GFIGPGIDVPAPDMSTGER	3	GFIGPGIDVPAPDMSTGER3	27049.1	15503.8	24345.3
Q05030	Q05030	PGFRB_RAT	Pdgfrb	Platelet-derived growth factor receptor beta	1	GFIGTFEDK	GFIGTFEDK	2	GFIGTFEDK2	61332.4	55345.6	38526.9
Q02353	Q02353;D3ZD62	NDST1_RAT	Ndst1	Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1	0	GFIHNGIMVLPR	GFIHNGIMVLPR	3	GFIHNGIMVLPR3	5191.34	5981.93	8001.21
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	GFILLPK	GFILLPK	1	GFILLPK1	5661.12		6222.74
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	GFILLPK	GFILLPK	2	GFILLPK2	59820.1	64917.1	52859.6
A0JPJ7	A0JPJ7	OLA1_RAT	Ola1	Obg-like ATPase 1	1	GFIMAEVMK	GFIMAEVMK	2	GFIMAEVMK2	42235.6	39561.5	30866.7
G3V9M6	F1M5Q4;G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	0	GFIPNIR	GFIPNIR	2	GFIPNIR2	100922	125964	92985.5
B1WBR8	B1WBR8	B1WBR8_RAT	Fbxl4	F-box and leucine-rich repeat protein 4	1	GFISVSGFSR	GFISVSGFSR	2	GFISVSGFSR2	4185.5		
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	GFITIVDVQR	GFITIVDVQR	2	GFITIVDVQR2	204147	190652	221297
D3ZN06	D3ZN06	D3ZN06_RAT	Cd248	CD248 molecule	1	GFIWTTGDQDTAFTNWAQPATEGPCPAQR	GFIWTTGDQDTAFTNWAQPATEGPC(UniMod:4)PAQR	4	GFIWTTGDQDTAFTNWAQPATEGPC(UniMod:4)PAQR4	19368.3	14357.5	21540.2
Q04931	Q04931	SSRP1_RAT	Ssrp1	FACT complex subunit SSRP1	1	GFIYVHKPPVHIR	GFIYVHKPPVHIR	3	GFIYVHKPPVHIR3	7936.62		
Q04931	Q04931	SSRP1_RAT	Ssrp1	FACT complex subunit SSRP1	1	GFIYVHKPPVHIR	GFIYVHKPPVHIR	4	GFIYVHKPPVHIR4	43328.7	14002.4	13152.3
Q6P3V8	A0A8I6GF11;Q6P3V8	Q6P3V8_RAT	Eif4a1	ATP-dependent RNA helicase	0	GFKDQIYDIFQK	GFKDQIYDIFQK	2	GFKDQIYDIFQK2	4746.8		2639.22
Q6P3V8	A0A8I6GF11;Q6P3V8	Q6P3V8_RAT	Eif4a1	ATP-dependent RNA helicase	0	GFKDQIYDIFQK	GFKDQIYDIFQK	3	GFKDQIYDIFQK3	24633.1	13527.2	14075.1
D3ZYF5	D3ZYF5	D3ZYF5_RAT	Trim58	Tripartite motif-containing 58	1	GFLAQEEQLQLR	GFLAQEEQLQLR	2	GFLAQEEQLQLR2	11613.2	13014.5	8064.56
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	GFLAYYQAVDLDECTSQPNSVEEGLQPR	GFLAYYQAVDLDEC(UniMod:4)TSQPNSVEEGLQPR	4	GFLAYYQAVDLDEC(UniMod:4)TSQPNSVEEGLQPR4	18794.2	7943.43	9525.44
O35370	O35370	O35370_RAT	Thbd	Thrombomodulin	1	GFLCEFYFAAFCRPLR	GFLC(UniMod:4)EFYFAAFC(UniMod:4)RPLR	3	GFLC(UniMod:4)EFYFAAFC(UniMod:4)RPLR3	21087.4	10271	
Q6P7D4	Q6P7D4	CP20A_RAT	Cyp20a1	Cytochrome P450 20A1	1	GFLDGSLDK	GFLDGSLDK	2	GFLDGSLDK2	34181	26285.6	31022
B5DEH4	B5DEH4	B5DEH4_RAT	Uap1l1	UDP-N-acetylglucosamine pyrophosphorylase 1 like 1	1	GFLDMVIR	GFLDMVIR	2	GFLDMVIR2	6827.84	6899.2	5455.6
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	GFLGCFPDIIGAHK	GFLGC(UniMod:4)FPDIIGAHK	2	GFLGC(UniMod:4)FPDIIGAHK2	11056.3	5329.26	7749.78
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	GFLGCFPDIIGAHK	GFLGC(UniMod:4)FPDIIGAHK	3	GFLGC(UniMod:4)FPDIIGAHK3	87825.1	86793	99240.6
A0A0G2K4Y6	A0A0G2K4Y6	A0A0G2K4Y6_RAT	Haus6	Family with sequence similarity 29, member A	1	GFLGVSPFSLIK	GFLGVSPFSLIK	2	GFLGVSPFSLIK2	3928.86	5300.39	
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	GFLHNEVK	GFLHNEVK	1	GFLHNEVK1	4280.46	6588.91	5435.24
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	GFLHNEVK	GFLHNEVK	2	GFLHNEVK2	102837	84935.3	80409
A0A8I6A2I6	A0A8I6A2I6	A0A8I6A2I6_RAT	Frrs1	Ferric-chelate reductase 1	1	GFLLEAR	GFLLEAR	2	GFLLEAR2	45327.9	57616.2	50483.5
O08628	O08628	PCOC1_RAT	Pcolce	Procollagen C-endopeptidase enhancer 1	1	GFLLWYSGR	GFLLWYSGR	2	GFLLWYSGR2	29161.7	20323.8	17643.1
O35346	O35346	FAK1_RAT	Ptk2	Focal adhesion kinase 1	1	GFLNQFTEDKPTLNFFYQQVK	GFLNQFTEDKPTLNFFYQQVK	3	GFLNQFTEDKPTLNFFYQQVK3	5611.78	15609.3	9195.35
Q9QYU2	Q9QYU2	EFTS_RAT	Tsfm	Elongation factor Ts, mitochondrial	1	GFLNSSELSELAAGPDGEGSLK	GFLNSSELSELAAGPDGEGSLK	3	GFLNSSELSELAAGPDGEGSLK3	8071.29	11241	18769.9
D3ZZB2	D3ZZB2	D3ZZB2_RAT	Pex1	Peroxisomal ATPase PEX1	1	GFLPASLR	GFLPASLR	2	GFLPASLR2	12616.3		14835.7
A0A8I6AZI9	A0A8I6AZI9	A0A8I6AZI9_RAT	Ubash3a	Ubiquitin associated and SH3 domain containing, A	1	GFLPENYTER	GFLPENYTER	2	GFLPENYTER2	22026.7	21883.2	47646.1
F1LWX9	F1LWX9	F1LWX9_RAT	Tmem117	Transmembrane protein 117	1	GFLPSDEVSR	GFLPSDEVSR	2	GFLPSDEVSR2	29577.4	31094.6	46928.3
B1WBZ6	B1WBZ6	B1WBZ6_RAT	RGD1565685	RGD1565685 protein	1	GFLQSNTDLR	GFLQSNTDLR	2	GFLQSNTDLR2	29071.4	35090.1	28226.9
A0A8I6AP98	A0A0G2K8S3;A0A8I6AP98	A0A8I6AP98_RAT	Mettl27	Methyltransferase like 27	0	GFLQVQGVDGSPEMLK	GFLQVQGVDGSPEMLK	2	GFLQVQGVDGSPEMLK2	6631.48	10016	6637.83
A0A8I6GKX8	A0A8I6GKX8	A0A8I6GKX8_RAT	Iqsec2	IQ motif and Sec7 domain ArfGEF 2	1	GFLSDTPVGVAHFILER	GFLSDTPVGVAHFILER	3	GFLSDTPVGVAHFILER3	3871.12	3901.86	6847.09
O35094	O35094	TIM44_RAT	Timm44	Mitochondrial import inner membrane translocase subunit TIM44	1	GFLSGLLDNIK	GFLSGLLDNIK	2	GFLSGLLDNIK2	28617.4	8455.17	23613.4
P29147	P29147	BDH_RAT	Bdh1	D-beta-hydroxybutyrate dehydrogenase, mitochondrial	1	GFLVFAGCLLK	GFLVFAGC(UniMod:4)LLK	2	GFLVFAGC(UniMod:4)LLK2	21878.4	30492.1	26273.3
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	GFLVIGYSLEK	GFLVIGYSLEK	2	GFLVIGYSLEK2	5975.33	8795.74	5564.06
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	GFLWDEGFHQLVVQR	GFLWDEGFHQLVVQR	2	GFLWDEGFHQLVVQR2	2162.45	6159.59	1747.27
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	GFLWDEGFHQLVVQR	GFLWDEGFHQLVVQR	3	GFLWDEGFHQLVVQR3	33681	47682	38905.4
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	GFMDGKQACVLMIKALELDSNLYR	GFMDGKQAC(UniMod:4)VLMIKALELDSNLYR	4	GFMDGKQAC(UniMod:4)VLMIKALELDSNLYR4	6146.47	4000.21	2764.63
A1L134	A1L134	AUP1_RAT	Aup1	Lipid droplet-regulating VLDL assembly factor AUP1	1	GFMEMDR	GFMEMDR	2	GFMEMDR2	44173.2	34562.7	37747.4
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	GFMFSQAMK	GFMFSQAMK	2	GFMFSQAMK2	26153.3	30683.9	25831.4
B2GV97	B2GV97	B2GV97_RAT	Sepsecs	O-phosphoseryl-tRNA(Sec) selenium transferase	1	GFMSHTDNYPCAYLNAAAAIGMK	GFMSHTDNYPC(UniMod:4)AYLNAAAAIGMK	3	GFMSHTDNYPC(UniMod:4)AYLNAAAAIGMK3		3470.55	3783.38
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	GFMTNGADIDECK	GFMTNGADIDEC(UniMod:4)K	2	GFMTNGADIDEC(UniMod:4)K2	11762	15951.4	11934.6
A0A0G2JXT6	A0A0G2JXT6;A0A8I6AEZ2	MTMR6_RAT	Mtmr6	Myotubularin-related protein 6	0	GFMVLIEK	GFMVLIEK	2	GFMVLIEK2	61238.8	54555.3	57531.8
A0A0G2JXT6	A0A0G2JXT6;A0A8I6AEZ2	MTMR6_RAT	Mtmr6	Myotubularin-related protein 6	0	GFMVLIEKDWISFGHK	GFMVLIEKDWISFGHK	4	GFMVLIEKDWISFGHK4		5214.4	7031.87
P97521	P97521	MCAT_RAT	Slc25a20	Mitochondrial carnitine/acylcarnitine carrier protein	1	GFNAVMIR	GFNAVMIR	2	GFNAVMIR2	166517	159886	173501
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GFNCESK	GFNC(UniMod:4)ESK	1	GFNC(UniMod:4)ESK1	9967.1	13744.8	13331.1
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GFNCESK	GFNC(UniMod:4)ESK	2	GFNC(UniMod:4)ESK2	381076	468833	708070
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GFNCESKPEPEETCFDK	GFNC(UniMod:4)ESKPEPEETC(UniMod:4)FDK	3	GFNC(UniMod:4)ESKPEPEETC(UniMod:4)FDK3	2.39114e+07	2.81854e+07	2.61234e+07
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GFNCESKPEPEETCFDKYTGNTYK	GFNC(UniMod:4)ESKPEPEETC(UniMod:4)FDKYTGNTYK	3	GFNC(UniMod:4)ESKPEPEETC(UniMod:4)FDKYTGNTYK3		2822.51	7605.96
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GFNCESKPEPEETCFDKYTGNTYK	GFNC(UniMod:4)ESKPEPEETC(UniMod:4)FDKYTGNTYK	4	GFNC(UniMod:4)ESKPEPEETC(UniMod:4)FDKYTGNTYK4	15743.7	15684.5	32634.5
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	GFNDGLEELCK	GFNDGLEELC(UniMod:4)K	2	GFNDGLEELC(UniMod:4)K2	12857.1	16411.6	19270.8
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	GFNGEDFEQLAK	GFNGEDFEQLAK	2	GFNGEDFEQLAK2	55442.9	47971	46811
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	GFNLPYQDAR	GFNLPYQDAR	2	GFNLPYQDAR2	255572	294302	282704
Q2LC84	A1L1I3;Q2LC84	NUMB_RAT	Numb	Protein numb homolog	0	GFPALSQK	GFPALSQK	2	GFPALSQK2	43906.4	42073	55764.5
P51111	P51111	HD_RAT	Htt	Huntingtin	1	GFPCEAR	GFPC(UniMod:4)EAR	2	GFPC(UniMod:4)EAR2	50911.5	47181.5	58253.3
F1M6Q3	F1M6Q3	F1M6Q3_RAT	Col4a2	Collagen type IV alpha 2 chain	1	GFPGVNGEFGK	GFPGVNGEFGK	2	GFPGVNGEFGK2	31988.2	48859.3	36619.1
P62815	P62815;D3ZZS8	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	0	GFPGYMYTDLATIYER	GFPGYMYTDLATIYER	2	GFPGYMYTDLATIYER2	28503.6	24042	30078.5
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	GFPIKDDFLEQSEK	GFPIKDDFLEQSEK	2	GFPIKDDFLEQSEK2	51238.5	43834.8	47396.4
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	GFPIKDDFLEQSEK	GFPIKDDFLEQSEK	3	GFPIKDDFLEQSEK3	282605	259705	239810
Q02353	Q02353	NDST1_RAT	Ndst1	Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1	1	GFPLFLHSNLGLK	GFPLFLHSNLGLK	3	GFPLFLHSNLGLK3	6973.48	7447.03	2003.55
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	GFPLGLGAK	GFPLGLGAK	2	GFPLGLGAK2	258723	288069	275442
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	GFPLITITVR	GFPLITITVR	2	GFPLITITVR2	24026.1	14722	13259
Q63313	Q63313	LBP_RAT	Lbp	Lipopolysaccharide-binding protein	1	GFPLPLPR	GFPLPLPR	2	GFPLPLPR2	165852	149479	140141
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	GFPLVTVQR	GFPLVTVQR	2	GFPLVTVQR2	97095.3	98805.2	117211
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	GFPMPGFDER	GFPMPGFDER	2	GFPMPGFDER2	115887	99140.3	120338
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	GFPNVVTSAITLPNIR	GFPNVVTSAITLPNIR	2	GFPNVVTSAITLPNIR2	118020	96378.1	115096
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	GFPNVVTSAITLPNIR	GFPNVVTSAITLPNIR	3	GFPNVVTSAITLPNIR3	149334	180040	172529
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	GFPSILGPPR	GFPSILGPPR	2	GFPSILGPPR2	203054	226867	256730
A0A8I6A1V1	A0A8I6A1V1	A0A8I6A1V1_RAT	Ptprd	protein-tyrosine-phosphatase	1	GFPTIDMGPQLK	GFPTIDMGPQLK	2	GFPTIDMGPQLK2			2962.97
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	GFPTIYFSPANK	GFPTIYFSPANK	2	GFPTIYFSPANK2	595444	491442	574676
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	GFPTIYFSPANKK	GFPTIYFSPANKK	2	GFPTIYFSPANKK2	101182	117290	124025
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	GFPTIYFSPANKK	GFPTIYFSPANKK	3	GFPTIYFSPANKK3	299038	288184	327680
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	GFPVLLHYQTVSEPAVIK	GFPVLLHYQTVSEPAVIK	3	GFPVLLHYQTVSEPAVIK3	33142.8	36952.1	25839.9
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	GFPVSFQSR	GFPVSFQSR	2	GFPVSFQSR2	731313	690929	678325
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	GFQADYYSTPISTSTR	GFQADYYSTPISTSTR	2	GFQADYYSTPISTSTR2	1.05003e+06	1.1313e+06	1.04933e+06
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	GFQADYYSTPISTSTR	GFQADYYSTPISTSTR	3	GFQADYYSTPISTSTR3	119361	119480	121032
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	GFQASHSTECGGQVR	GFQASHSTEC(UniMod:4)GGQVR	2	GFQASHSTEC(UniMod:4)GGQVR2	3255.9	1864.3	
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	GFQASHSTECGGQVR	GFQASHSTEC(UniMod:4)GGQVR	3	GFQASHSTEC(UniMod:4)GGQVR3	27115.7	25043.2	42922.9
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	GFQEDSDIR	GFQEDSDIR	2	GFQEDSDIR2	17249.1	19849.5	18180
Q5XHY5	Q5XHY5	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	1	GFQEVVTPNIFNSR	GFQEVVTPNIFNSR	2	GFQEVVTPNIFNSR2	7458.61	7825.02	7102.7
D3ZHZ3	D3ZHZ3	D3ZHZ3_RAT	Osbpl3	Oxysterol-binding protein	1	GFQFFAEQVSHHPPISACHAESR	GFQFFAEQVSHHPPISAC(UniMod:4)HAESR	4	GFQFFAEQVSHHPPISAC(UniMod:4)HAESR4	5731.42		
P62634	P62634	CNBP_RAT	Cnbp	CCHC-type zinc finger nucleic acid binding protein	1	GFQFVSSSLPDICYR	GFQFVSSSLPDIC(UniMod:4)YR	2	GFQFVSSSLPDIC(UniMod:4)YR2	5036.06	2753.75	
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	GFQGSFEELCR	GFQGSFEELC(UniMod:4)R	2	GFQGSFEELC(UniMod:4)R2	14999.6	13693.2	26783.9
A0A0G2JZA7	A0A0G2JZA7	A0A0G2JZA7_RAT	Cemip2	hyaluronoglucosaminidase	1	GFQIYDGPIHLTK	GFQIYDGPIHLTK	2	GFQIYDGPIHLTK2		2760.51	1401.63
A0A0G2JZA7	A0A0G2JZA7	A0A0G2JZA7_RAT	Cemip2	hyaluronoglucosaminidase	1	GFQIYDGPIHLTK	GFQIYDGPIHLTK	3	GFQIYDGPIHLTK3	52919.9	43456.3	47099
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	GFQLDIR	GFQLDIR	2	GFQLDIR2	63437.8	71175.9	62971.8
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	GFQQILAGDYDHLPEQAFYMVGPIEEAVAK	GFQQILAGDYDHLPEQAFYMVGPIEEAVAK	4	GFQQILAGDYDHLPEQAFYMVGPIEEAVAK4	71058.1	74616.5	64576.1
A0A0G2K4S7	A0A0G2K4S7	A0A0G2K4S7_RAT	Usp45	Ubiquitin carboxyl-terminal hydrolase	1	GFQQQDSQELLHHLLDAVR	GFQQQDSQELLHHLLDAVR	4	GFQQQDSQELLHHLLDAVR4	3430.34	1984.12	5578.46
Q7TPA5	Q7TPA5	SPA11_RAT	Serpina11	Serpin A11	1	GFQSLLHTLDLPSPK	GFQSLLHTLDLPSPK	3	GFQSLLHTLDLPSPK3	31179.6		41036.5
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	GFQVAPDHHNDHK	GFQVAPDHHNDHK	3	GFQVAPDHHNDHK3	11404	3808.47	
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	GFQVTVHVGNVR	GFQVTVHVGNVR	3	GFQVTVHVGNVR3	8420.02		8767.1
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	GFQVVVLTDSK	GFQVVVLTDSK	2	GFQVVVLTDSK2	32745.5	29801.6	26186.2
O35806	O35806	LTBP2_RAT	Ltbp2	Latent-transforming growth factor beta-binding protein 2	1	GFRPSPLGNSCEDVDECEGPQNSCLGGECK	GFRPSPLGNSC(UniMod:4)EDVDEC(UniMod:4)EGPQNSC(UniMod:4)LGGEC(UniMod:4)K	4	GFRPSPLGNSC(UniMod:4)EDVDEC(UniMod:4)EGPQNSC(UniMod:4)LGGEC(UniMod:4)K4	3525.36	4380.75	
O35777	O35777	MAGT1_RAT	Magt1	Magnesium transporter protein 1	1	GFSAEQIAR	GFSAEQIAR	2	GFSAEQIAR2	103424	121665	111176
Q3SWT5	Q3SWT5	S41A3_RAT	Slc41a3	Solute carrier family 41 member 3	1	GFSCELTR	GFSC(UniMod:4)ELTR	2	GFSC(UniMod:4)ELTR2	6362.26	6390.66	8232.26
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	GFSEGAASTFDYSLK	GFSEGAASTFDYSLK	2	GFSEGAASTFDYSLK2	21792.8	13420.9	6399.29
Q8VHK7	Q8VHK7	HDGF_RAT	Hdgf	Hepatoma-derived growth factor	1	GFSEGLWEIENNPTVK	GFSEGLWEIENNPTVK	2	GFSEGLWEIENNPTVK2		1307.2	4330.82
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	GFSFLFSHFK	GFSFLFSHFK	3	GFSFLFSHFK3	4122.43	4130.48	5830.87
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	GFSGHLCQYDVDECASTPCK	GFSGHLC(UniMod:4)QYDVDEC(UniMod:4)ASTPC(UniMod:4)K	3	GFSGHLC(UniMod:4)QYDVDEC(UniMod:4)ASTPC(UniMod:4)K3	8396.3	5692.35	3950
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	GFSLDQSGASCEDVDECEGNHR	GFSLDQSGASC(UniMod:4)EDVDEC(UniMod:4)EGNHR	3	GFSLDQSGASC(UniMod:4)EDVDEC(UniMod:4)EGNHR3	22084	22084.4	22457.9
P41123	D3ZD02;F1M2E9;A0A8I6A3N6;A0A8I5ZNK4;P41123	RL13_RAT	Rpl13	Large ribosomal subunit protein eL13	0	GFSLEELR	GFSLEELR	2	GFSLEELR2	43864.8	32054.3	32623.8
P35053	P35053	GPC1_RAT	Gpc1	Glypican-1	1	GFSLSDVPQAEISGEHLR	GFSLSDVPQAEISGEHLR	2	GFSLSDVPQAEISGEHLR2	4074.5	5738.97	2739.95
D3ZTJ0	D3ZTJ0	D3ZTJ0_RAT	Rp2	Protein XRP2	1	GFSLVQTK	GFSLVQTK	2	GFSLVQTK2	37743.8	25528.4	25477.4
P63329	P63329	PP2BA_RAT	Ppp3ca	Protein phosphatase 3 catalytic subunit alpha	1	GFSPQHK	GFSPQHK	2	GFSPQHK2			35945
D3Z9C0	D3Z9C0	D3Z9C0_RAT	Mios	Meiosis regulator for oocyte development	1	GFSQYGVSGSPTK	GFSQYGVSGSPTK	2	GFSQYGVSGSPTK2	78591.3	84025.2	90216.6
Q6IG02	Q6IG02	K22E_RAT	Krt2	Keratin, type II cytoskeletal 2 epidermal	1	GFSSGSAVVSGGSR	GFSSGSAVVSGGSR	2	GFSSGSAVVSGGSR2	1.17331e+06	958691	912650
Q6IG02	Q6IG02	K22E_RAT	Krt2	Keratin, type II cytoskeletal 2 epidermal	1	GFSSGSAVVSGGSRR	GFSSGSAVVSGGSRR	3	GFSSGSAVVSGGSRR3		23786.7	6485.86
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	GFSSSAER	GFSSSAER	2	GFSSSAER2		29046.3	
Q505J8	Q505J8	SYFA_RAT	Farsa	Phenylalanine--tRNA ligase alpha subunit	1	GFSTSVSK	GFSTSVSK	2	GFSTSVSK2	23159.8	23395.1	31598.4
Q99MZ8	Q99MZ8	LASP1_RAT	Lasp1	LIM and SH3 domain protein 1	1	GFSVVADTPELQR	GFSVVADTPELQR	2	GFSVVADTPELQR2	407014	283289	282904
Q99MZ8	Q99MZ8	LASP1_RAT	Lasp1	LIM and SH3 domain protein 1	1	GFSVVADTPELQR	GFSVVADTPELQR	3	GFSVVADTPELQR3	5088.77	4214.81	
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	GFSWVGGGEDTTYSNWYK	GFSWVGGGEDTTYSNWYK	3	GFSWVGGGEDTTYSNWYK3	12076.4	13097.4	9284.18
Q6AY23	Q6AY23	P5CR2_RAT	Pycr2	Pyrroline-5-carboxylate reductase 2	1	GFTAAGVLSAHK	GFTAAGVLSAHK	3	GFTAAGVLSAHK3	15972.5	6681.17	17931.2
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	GFTCSCTAGR	GFTC(UniMod:4)SC(UniMod:4)TAGR	2	GFTC(UniMod:4)SC(UniMod:4)TAGR2	14466.6	20466	18290.1
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	GFTCVFDLR	GFTC(UniMod:4)VFDLR	2	GFTC(UniMod:4)VFDLR2	4343.49	5673.27	8842.55
A0A8I6G9F8	A0A8I6G9F8	A0A8I6G9F8_RAT	Wdr59	WD repeat domain 59	1	GFTFQCAICHVAVR	GFTFQC(UniMod:4)AIC(UniMod:4)HVAVR	3	GFTFQC(UniMod:4)AIC(UniMod:4)HVAVR3	5810	2178.88	
Q6MG61	Q6MG61	CLIC1_RAT	Clic1	Chloride intracellular channel protein 1	1	GFTIPEAFR	GFTIPEAFR	2	GFTIPEAFR2	400297	302677	349302
P97700	P97700	M2OM_RAT	Slc25a11	Mitochondrial 2-oxoglutarate/malate carrier protein	1	GFTPYYAR	GFTPYYAR	2	GFTPYYAR2	46332.5	30515.6	38528.4
P43253	P43253	PI2R_RAT	Ptgir	Prostacyclin receptor	1	GFTQAIAPDSR	GFTQAIAPDSR	2	GFTQAIAPDSR2	145070	144409	172412
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	GFTSLGMEEER	GFTSLGMEEER	2	GFTSLGMEEER2	10047.4	16692.3	19242.8
A0A8I5ZNY0	A0A8I5ZNY0	A0A8I5ZNY0_RAT	Avl9	AVL9 cell migration associated	1	GFVAGATNILFR	GFVAGATNILFR	2	GFVAGATNILFR2	7181.46	11164.5	8208.16
P07633	P07633	PCCB_RAT	Pccb	Propionyl-CoA carboxylase beta chain, mitochondrial	1	GFVDDIIQPSSTR	GFVDDIIQPSSTR	2	GFVDDIIQPSSTR2	40510.2	43892.5	42651.8
P20070	P20070	NB5R3_RAT	Cyb5r3	NADH-cytochrome b5 reductase 3	1	GFVDLVVK	GFVDLVVK	2	GFVDLVVK2	45900.6	41512.8	42355.6
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	GFVEIQTPK	GFVEIQTPK	2	GFVEIQTPK2	96245.1	93002.3	87837.6
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	GFVFNLIK	GFVFNLIK	2	GFVFNLIK2	3588.98	2294.56	
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	GFVFTLIK	GFVFTLIK	2	GFVFTLIK2	7029.1	11017.8	9286.72
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	GFVIATTR	GFVIATTR	2	GFVIATTR2	26764.7	24363.1	27408.8
Q9JHW1	Q9JHW1	CBPD_RAT	Cpd	Carboxypeptidase D	1	GFVLDATDGR	GFVLDATDGR	2	GFVLDATDGR2	8143.85	9522.02	9351.13
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	GFVLQDTVEQLR	GFVLQDTVEQLR	2	GFVLQDTVEQLR2	49262.6	37628.5	57481.3
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	GFVLQDTVEQLR	GFVLQDTVEQLR	3	GFVLQDTVEQLR3	4127.08	3105.57	3202.35
P62489	P62489	RPB7_RAT	Polr2g	DNA-directed RNA polymerase II subunit RPB7	1	GFVLYPVK	GFVLYPVK	2	GFVLYPVK2	4554.15	7784.62	5543.02
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	GFVPAGESSYETGGENYK	GFVPAGESSYETGGENYK	2	GFVPAGESSYETGGENYK2	819350	917028	830134
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	GFVPAGESSYETGGENYK	GFVPAGESSYETGGENYK	3	GFVPAGESSYETGGENYK3	95972.4	98500.7	68290.5
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	GFVPSPTSKPEGHESLVDR	GFVPSPTSKPEGHESLVDR	3	GFVPSPTSKPEGHESLVDR3	52262.9	32950.6	50275.6
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	GFVPSPTSKPEGHESLVDR	GFVPSPTSKPEGHESLVDR	4	GFVPSPTSKPEGHESLVDR4	71779	65746.8	94891.8
P20786	P20786	PGFRA_RAT	Pdgfra	Platelet-derived growth factor receptor alpha	1	GFVQIRPTFGHLETVNLHQVR	GFVQIRPTFGHLETVNLHQVR	4	GFVQIRPTFGHLETVNLHQVR4	5075.56	2343.79	4556.74
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	GFVQTELTPPATSR	GFVQTELTPPATSR	2	GFVQTELTPPATSR2	13715.1	8093.33	12803
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	GFVQVDDGR	GFVQVDDGR	2	GFVQVDDGR2	10221	5205.3	7706.55
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	GFVQVDDGRK	GFVQVDDGRK	2	GFVQVDDGRK2	8735.08	3512.38	6396.02
Q8CG09	A0A0G2K5H6;Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	0	GFVSALPDK	GFVSALPDK	2	GFVSALPDK2	49893.2	46430	40336.8
Q8CG09	A0A0G2K5H6;Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	0	GFVSALPDKLNHECAEGGENLSVGQR	GFVSALPDKLNHEC(UniMod:4)AEGGENLSVGQR	4	GFVSALPDKLNHEC(UniMod:4)AEGGENLSVGQR4	16874	25036.3	22712.1
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	GFVTSTDGSR	GFVTSTDGSR	2	GFVTSTDGSR2	8469.91	7253.39	6502.6
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	GFVVAGPSR	GFVVAGPSR	2	GFVVAGPSR2	260707	272424	294858
F7ELS2	F7ELS2;Q6AYJ7;A0A8I6GM53	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	0	GFVVINQK	GFVVINQK	1	GFVVINQK1	4069.96	7606.53	3659.97
F7ELS2	F7ELS2;Q6AYJ7;A0A8I6GM53	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	0	GFVVINQK	GFVVINQK	2	GFVVINQK2	517387	562940	509501
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	GFVYKPDLK	GFVYKPDLK	2	GFVYKPDLK2	25863.1	34464.7	19870.4
Q68EJ0	Q68EJ0	NB5R4_RAT	Cyb5r4	Cytochrome b5 reductase 4	1	GFVYNVSPYMEYHPGGEDELMR	GFVYNVSPYMEYHPGGEDELMR	3	GFVYNVSPYMEYHPGGEDELMR3	3678.49		
Q02353	Q02353;D3ZD27	NDST1_RAT	Ndst1	Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1	0	GFWCQLLEGGK	GFWC(UniMod:4)QLLEGGK	2	GFWC(UniMod:4)QLLEGGK2	1259	2159.49	
D4A0A3	D4A0A3	D4A0A3_RAT	Pamr1	Peptidase domain containing associated with muscle regeneration 1	1	GFYCAECR	GFYC(UniMod:4)AEC(UniMod:4)R	2	GFYC(UniMod:4)AEC(UniMod:4)R2	3251.03	4092.32	
P97544	P97544	PLPP3_RAT	Plpp3	Phospholipid phosphatase 3	1	GFYCNDESIKYPLK	GFYC(UniMod:4)NDESIKYPLK	3	GFYC(UniMod:4)NDESIKYPLK3	16074.6	17892.7	13253.9
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	GFYDGVMLVDGFK	GFYDGVMLVDGFK	2	GFYDGVMLVDGFK2	22341.6	23189.3	28512.2
P48548	P48548	KCNJ5_RAT	Kcnj5	G protein-activated inward rectifier potassium channel 4	1	GFYEVDYNTFHDTYETNTPSCCAK	GFYEVDYNTFHDTYETNTPSC(UniMod:4)C(UniMod:4)AK	3	GFYEVDYNTFHDTYETNTPSC(UniMod:4)C(UniMod:4)AK3	42853.1	30211.6	39926.8
P08025	P08025	IGF1_RAT	Igf1	Insulin-like growth factor I	1	GFYFNKPTGYGSSIR	GFYFNKPTGYGSSIR	2	GFYFNKPTGYGSSIR2	23146.1	15560.3	23956.1
P08025	P08025	IGF1_RAT	Igf1	Insulin-like growth factor I	1	GFYFNKPTGYGSSIR	GFYFNKPTGYGSSIR	3	GFYFNKPTGYGSSIR3	150145	151850	143937
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	GFYIYQSGSK	GFYIYQSGSK	2	GFYIYQSGSK2	152089	176954	392400
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	GFYLLGEK	GFYLLGEK	2	GFYLLGEK2	96723.8	71365.6	84530.4
P20760	P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	1	GFYPPDIYTEWK	GFYPPDIYTEWK	2	GFYPPDIYTEWK2	678918	565380	712780
P20760	P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	1	GFYPPDIYTEWK	GFYPPDIYTEWK	3	GFYPPDIYTEWK3	1374.41	3421.89	
P20759	P20759	IGHG1_RAT		Ig gamma-1 chain C region	1	GFYPPDIYVEWQMNGQPQENYK	GFYPPDIYVEWQMNGQPQENYK	3	GFYPPDIYVEWQMNGQPQENYK3	81138.9	57355.5	49024.5
G3V8Z6	G3V8Z6	G3V8Z6_RAT	Krit1	KRIT1, ankyrin repeat containing	1	GFYTAPDAK	GFYTAPDAK	2	GFYTAPDAK2	10367.7	7185.79	
P15650	P15650	ACADL_RAT	Acadl	Long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	GFYYLMQELPQER	GFYYLMQELPQER	2	GFYYLMQELPQER2	72669.3	82274.2	80839.1
P15650	P15650	ACADL_RAT	Acadl	Long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	GFYYLMQELPQER	GFYYLMQELPQER	3	GFYYLMQELPQER3	22700.5	16838.8	28622
G3V6A9	G3V6A9	G3V6A9_RAT	Mfap4	Microfibril-associated glycoprotein 4-like	1	GFYYSLK	GFYYSLK	1	GFYYSLK1	161008	158754	134978
G3V6A9	G3V6A9	G3V6A9_RAT	Mfap4	Microfibril-associated glycoprotein 4-like	1	GFYYSLK	GFYYSLK	2	GFYYSLK2	4.61495e+06	4.83642e+06	4.86822e+06
G3V6A9	G3V6A9	G3V6A9_RAT	Mfap4	Microfibril-associated glycoprotein 4-like	1	GFYYSLKR	GFYYSLKR	2	GFYYSLKR2	14927.6	20258.8	17402.7
B0BNK1	B0BNK1	B0BNK1_RAT	Rab5c	RAB5C, member RAS oncogene family	1	GGAARPNGPAAGNK	GGAARPNGPAAGNK	2	GGAARPNGPAAGNK2			2423.66
B0BNK1	B0BNK1	B0BNK1_RAT	Rab5c	RAB5C, member RAS oncogene family	1	GGAARPNGPAAGNK	GGAARPNGPAAGNK	3	GGAARPNGPAAGNK3			12485
P27008	P27008	PARP1_RAT	Parp1	Poly [ADP-ribose] polymerase 1	1	GGAAVDPDSGLEHSAHVLEK	GGAAVDPDSGLEHSAHVLEK	3	GGAAVDPDSGLEHSAHVLEK3	4028.15		
P27008	P27008	PARP1_RAT	Parp1	Poly [ADP-ribose] polymerase 1	1	GGAAVDPDSGLEHSAHVLEK	GGAAVDPDSGLEHSAHVLEK	4	GGAAVDPDSGLEHSAHVLEK4	6964.77		
A0A8I6ALR3	A0A8I6ALR3	A0A8I6ALR3_RAT	Sh2d1b2	Uncharacterized LOC102556681	1	GGADGNFLIR	GGADGNFLIR	2	GGADGNFLIR2	20305.6	13130.7	19942.5
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	GGADVASIHLLITRPTR	GGADVASIHLLITRPTR	3	GGADVASIHLLITRPTR3	7828.12	10796.7	5441.43
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	GGADVASIHLLITRPTR	GGADVASIHLLITRPTR	4	GGADVASIHLLITRPTR4	17823.3	19809.2	17794.4
P30427	P30427	PLEC_RAT	Plec	Plectin	1	GGAEDELQALR	GGAEDELQALR	2	GGAEDELQALR2	4896.43	3844.57	
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	GGAEQFMEETER	GGAEQFMEETER	2	GGAEQFMEETER2	128792	146074	136484
P56571	P56571	ES1_RAT		ES1 protein homolog, mitochondrial	1	GGAEVHIFAPDVPQMHVIDHTK	GGAEVHIFAPDVPQMHVIDHTK	3	GGAEVHIFAPDVPQMHVIDHTK3	3321.92	4550.77	
P56571	P56571	ES1_RAT		ES1 protein homolog, mitochondrial	1	GGAEVHIFAPDVPQMHVIDHTK	GGAEVHIFAPDVPQMHVIDHTK	4	GGAEVHIFAPDVPQMHVIDHTK4	34618	38242.6	14523
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	GGAGFPTGLK	GGAGFPTGLK	2	GGAGFPTGLK2	55830.5	57165.3	85719.7
Q04940	Q04940	NEUG_RAT	Nrgn	Neurogranin	1	GGAGGGPSGD	GGAGGGPSGD	1	GGAGGGPSGD1			9750.03
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	GGAGGSHVYTK	GGAGGSHVYTK	2	GGAGGSHVYTK2			3747.65
Q5XIP0	Q5XIP0	Q5XIP0_RAT	Dnajb4	DnaJ heat shock protein family (Hsp40) member B4	1	GGAGGTDGQGGTFR	GGAGGTDGQGGTFR	2	GGAGGTDGQGGTFR2	2332.68		1110.24
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	GGAGPGGTGGGWK	GGAGPGGTGGGWK	2	GGAGPGGTGGGWK2	53886	46488.9	36913.3
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	GGAGQWNSLFR	GGAGQWNSLFR	2	GGAGQWNSLFR2	27499.1	15070.5	26751
P17074	F1LYF3;D3ZUD7;D3ZGN8;P17074	RS19_RAT	Rps19	Small ribosomal subunit protein eS19	0	GGAGVGSMTK	GGAGVGSMTK	2	GGAGVGSMTK2	10156.1	14769	14535
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	GGAGYWNSLFR	GGAGYWNSLFR	2	GGAGYWNSLFR2	26791.7	33308.3	35112.9
A0A8I6AKB0	A0A8I6AKB0	A0A8I6AKB0_RAT	Asmtl	Acetylserotonin O-methyltransferase-like	1	GGAIMAEAVR	GGAIMAEAVR	2	GGAIMAEAVR2	21194.4	25335.2	25654.5
D3Z8F6	D3Z8F6	D3Z8F6_RAT	Dennd1b	DENN domain containing 1B	1	GGALFNTAVTK	GGALFNTAVTK	2	GGALFNTAVTK2	20406.2	20879.7	10836.6
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GGALHIYHQR	GGALHIYHQR	2	GGALHIYHQR2	14812.4	20668.8	18147.5
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GGALHIYHQR	GGALHIYHQR	3	GGALHIYHQR3	186618	210406	121095
B1WBY7	B1WBY7	B1WBY7_RAT	Erlin1	Erlin	1	GGALLTSPSGPGYHIMLPFITTFR	GGALLTSPSGPGYHIMLPFITTFR	3	GGALLTSPSGPGYHIMLPFITTFR3	4985.95	3261.77	
B5DEH2	B5DEH2	ERLN2_RAT	Erlin2	Erlin-2	1	GGALLTSTSGPGFHLMLPFITSYK	GGALLTSTSGPGFHLMLPFITSYK	3	GGALLTSTSGPGFHLMLPFITSYK3	20411.2	28273.3	14863.9
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	GGANAWRPQVNDPTQWLQVDLQR	GGANAWRPQVNDPTQWLQVDLQR	3	GGANAWRPQVNDPTQWLQVDLQR3	208386	226389	202829
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	GGANAWRPQVNDPTQWLQVDLQR	GGANAWRPQVNDPTQWLQVDLQR	4	GGANAWRPQVNDPTQWLQVDLQR4	7064.19	6531.07	10906.7
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	GGANEGSEDDMLVDWFK	GGANEGSEDDMLVDWFK	2	GGANEGSEDDMLVDWFK2	11793	8492.02	12101.1
B0BN30	B0BN30	B0BN30_RAT	Mtch1	Mitochondrial carrier 1	1	GGAPAGVEAR	GGAPAGVEAR	2	GGAPAGVEAR2	56553.4	63517.4	58635.8
A0A8I6AA52	A0A8I6AA52	A0A8I6AA52_RAT	Wdr48	WD repeat-containing protein 48	1	GGASIIQCHILNDK	GGASIIQC(UniMod:4)HILNDK	3	GGASIIQC(UniMod:4)HILNDK3	16429.9	10151	12472.1
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	GGATPPALLLLLSR	GGATPPALLLLLSR	2	GGATPPALLLLLSR2	24443.9	21294.6	17760.4
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	GGAYSLK	GGAYSLK	1	GGAYSLK1	2939.59	5138.89	4561.46
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	GGAYSLKK	GGAYSLKK	2	GGAYSLKK2	20732.3	29924.7	32687.2
P24268	P24268	CATD_RAT	Ctsd	Cathepsin D	1	GGCEAIVDTGTSLLVGPVDEVK	GGC(UniMod:4)EAIVDTGTSLLVGPVDEVK	3	GGC(UniMod:4)EAIVDTGTSLLVGPVDEVK3	35933.1	31385.8	45888.7
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	GGCHADALCSYVGPGQSR	GGC(UniMod:4)HADALC(UniMod:4)SYVGPGQSR	3	GGC(UniMod:4)HADALC(UniMod:4)SYVGPGQSR3	12259.7	16790.3	6632.37
A0A8I6AAR9	A0A8I6AAR9	A0A8I6AAR9_RAT	Ankrd17	Ankyrin repeat domain 17	1	GGCNINAIR	GGC(UniMod:4)NINAIR	2	GGC(UniMod:4)NINAIR2	2749.8	5219.73	4751.96
F7EZE5	F7EZE5	F7EZE5_RAT	Btf3	Transcription factor BTF3	1	GGCPGGEATPSLLPPLGGTR	GGC(UniMod:4)PGGEATPSLLPPLGGTR	2	GGC(UniMod:4)PGGEATPSLLPPLGGTR2	11514.7	15472.4	8378.58
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	GGCQAQDYTSGMGIVNGAK	GGC(UniMod:4)QAQDYTSGMGIVNGAK	2	GGC(UniMod:4)QAQDYTSGMGIVNGAK2	2244.7	2602.69	
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	GGCSEHADCFNTGPNTR	GGC(UniMod:4)SEHADC(UniMod:4)FNTGPNTR	3	GGC(UniMod:4)SEHADC(UniMod:4)FNTGPNTR3	6825.27	4059.02	
P62853	D3ZCH5;M0R763;F1M6F4;P62853	RS25_RAT	Rps25	Small ribosomal subunit protein eS25	0	GGDAPAAGEDA	GGDAPAAGEDA	1	GGDAPAAGEDA1	6845.11	6317.31	
G3V6K3	G3V6K3	G3V6K3_RAT	Exosc7	Exosome component 7	1	GGDDLGTEIANTLYR	GGDDLGTEIANTLYR	2	GGDDLGTEIANTLYR2	4673.53	3854.32	4735.91
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	GGDEVMFMR	GGDEVMFMR	2	GGDEVMFMR2	7373.14	8728.22	6545.53
Q5U2Z4	Q5U2Z4	Q5U2Z4_RAT	Nfkb2	Nuclear factor kappa B subunit 2	1	GGDEVYLLCDK	GGDEVYLLC(UniMod:4)DK	2	GGDEVYLLC(UniMod:4)DK2	5353.65	5359.06	9276.77
Q6AY20	Q6AY20;A0A8I6A547	MPRD_RAT	M6pr	Cation-dependent mannose-6-phosphate receptor	0	GGDEYDNHCGK	GGDEYDNHC(UniMod:4)GK	2	GGDEYDNHC(UniMod:4)GK2			9047.17
Q6AY20	Q6AY20;A0A8I6A547	MPRD_RAT	M6pr	Cation-dependent mannose-6-phosphate receptor	0	GGDEYDNHCGK	GGDEYDNHC(UniMod:4)GK	3	GGDEYDNHC(UniMod:4)GK3			16375
Q6P7D4	Q6P7D4	CP20A_RAT	Cyp20a1	Cytochrome P450 20A1	1	GGDFSQHTFIDSLVQR	GGDFSQHTFIDSLVQR	3	GGDFSQHTFIDSLVQR3	11708	11104	12656.9
Q811A3	Q811A3	PLOD2_RAT	Plod2	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2	1	GGDGMNSIGGGQK	GGDGMNSIGGGQK	2	GGDGMNSIGGGQK2	3774.81	3691.2	
Q642G4	Q642G4	PEX14_RAT	Pex14	Peroxisomal membrane protein PEX14	1	GGDGQINEQVEK	GGDGQINEQVEK	2	GGDGQINEQVEK2	9441.25	9879.64	12802.3
Q5XIU9	Q5XIU9	PGRC2_RAT	Pgrmc2	Membrane-associated progesterone receptor component 2	1	GGDGSPGGAGATAAR	GGDGSPGGAGATAAR	2	GGDGSPGGAGATAAR2	93121.9		7635.43
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	GGDINFVFTGFSVNGK	GGDINFVFTGFSVNGK	2	GGDINFVFTGFSVNGK2			8040.74
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	GGDKPAVDLYQLSPSEVK	GGDKPAVDLYQLSPSEVK	3	GGDKPAVDLYQLSPSEVK3	33385.6	28365.5	29478.7
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	GGDLAAIYTPDAQHCQK	GGDLAAIYTPDAQHC(UniMod:4)QK	2	GGDLAAIYTPDAQHC(UniMod:4)QK2	45770.3	59205.9	70600.3
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	GGDLAAIYTPDAQHCQK	GGDLAAIYTPDAQHC(UniMod:4)QK	3	GGDLAAIYTPDAQHC(UniMod:4)QK3	129337	146140	135827
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	GGDLFDAITSSTK	GGDLFDAITSSTK	2	GGDLFDAITSSTK2	17352.1	16104.9	22734.8
O08875	O08875	DCLK1_RAT	Dclk1	Serine/threonine-protein kinase DCLK1	1	GGDLFDAITSTSK	GGDLFDAITSTSK	2	GGDLFDAITSTSK2		14670.5	
P61980	A0A8I5ZZG4;P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	GGDLMAYDR	GGDLMAYDR	2	GGDLMAYDR2	142989	117244	117926
P61980	A0A8I5ZZG4;P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	GGDLMAYDRR	GGDLMAYDRR	3	GGDLMAYDRR3	74470.2	88319.1	83621.8
Q5XIK2	Q5XIK2	TMX2_RAT	Tmx2	Thioredoxin-related transmembrane protein 2	1	GGDMSEEKPGNPTPTAVPDGENK	GGDMSEEKPGNPTPTAVPDGENK	3	GGDMSEEKPGNPTPTAVPDGENK3	12495.4	14616.5	9294.88
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	GGDNWAELMEVNHDDR	GGDNWAELMEVNHDDR	3	GGDNWAELMEVNHDDR3	8483.59	13023.6	7763.72
Q6P799	Q6P799	SYSC_RAT	Sars1	Serine--tRNA ligase, cytoplasmic	1	GGDPALIR	GGDPALIR	2	GGDPALIR2	35963.8	30050.7	38968.2
F7F9K9	F7F9K9	F7F9K9_RAT	Ndufb8	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial	1	GGDPSKEPEPVVHYEI	GGDPSKEPEPVVHYEI	2	GGDPSKEPEPVVHYEI2	3793.85	8993.98	3840.63
F7F9K9	F7F9K9	F7F9K9_RAT	Ndufb8	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial	1	GGDPSKEPEPVVHYEI	GGDPSKEPEPVVHYEI	3	GGDPSKEPEPVVHYEI3	77121.5	60515.1	87414.2
D3ZQJ3	D3ZQJ3	D3ZQJ3_RAT	Gigyf1	GRB10 interacting GYF protein 1	1	GGDQNLLPTMSR	GGDQNLLPTMSR	2	GGDQNLLPTMSR2	3726.97		7880.82
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	GGDSITAMEAR	GGDSITAMEAR	2	GGDSITAMEAR2	160452	169515	177638
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	GGDSLVPR	GGDSLVPR	2	GGDSLVPR2	34494.7	42764	37783.5
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	GGDVSVELPFVLMHPK	GGDVSVELPFVLMHPK	3	GGDVSVELPFVLMHPK3	10200.9	15123.4	11265.2
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	GGDVSVELPFVLMHPKPHDHITLPR	GGDVSVELPFVLMHPKPHDHITLPR	4	GGDVSVELPFVLMHPKPHDHITLPR4	3287.7		4655.93
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	GGEANQRPELK	GGEANQRPELK	3	GGEANQRPELK3		42351.7	
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	GGEFEMMPLGVNK	GGEFEMMPLGVNK	2	GGEFEMMPLGVNK2	5.97059e+06	4.03833e+06	3.81512e+06
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	GGEFEMMPLGVNK	GGEFEMMPLGVNK	3	GGEFEMMPLGVNK3	41233.2	21133.4	23313.7
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	GGEGGELQVWIK	GGEGGELQVWIK	2	GGEGGELQVWIK2	264725	219914	230484
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	GGEIEILTNTDNQGIK	GGEIEILTNTDNQGIK	2	GGEIEILTNTDNQGIK2	297678	302923	266257
P26772	P26772	CH10_RAT	Hspe1	10 kDa heat shock protein, mitochondrial	1	GGEIQPVSVK	GGEIQPVSVK	2	GGEIQPVSVK2	1.16944e+06	1.21146e+06	1.22316e+06
A0A0G2JUU7	A0A0G2JUU7	A0A0G2JUU7_RAT	Tubgcp3	Gamma-tubulin complex component	1	GGELASAVHAYTK	GGELASAVHAYTK	3	GGELASAVHAYTK3	6072.06	12743.4	1947.6
O55171	O55171;O88267	ACOT2_RAT	Acot2	Acyl-coenzyme A thioesterase 2, mitochondrial	0	GGELGLAMASFLK	GGELGLAMASFLK	2	GGELGLAMASFLK2	21629.9	24933.7	32497.9
Q8VBU2	Q8VBU2	NDRG2_RAT	Ndrg2	Protein NDRG2	1	GGEMTLK	GGEMTLK	1	GGEMTLK1	28733	27491.8	24956.4
F1LT12	F1LT12	F1LT12_RAT	Vash2	Vasohibin 2	1	GGEMVGAIR	GGEMVGAIR	2	GGEMVGAIR2	51927.5	45792.6	39812.2
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	GGENCIK	GGENC(UniMod:4)IK	1	GGENC(UniMod:4)IK1			14529.8
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	GGENCIK	GGENC(UniMod:4)IK	2	GGENC(UniMod:4)IK2			1.23303e+06
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	GGESTPLSPR	GGESTPLSPR	2	GGESTPLSPR2	14418	13599.3	15455.2
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	GGETPGSEQWK	GGETPGSEQWK	2	GGETPGSEQWK2	40473.8	35694.8	39162.1
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	GGETSEMYLIQPDTSSK	GGETSEMYLIQPDTSSK	2	GGETSEMYLIQPDTSSK2	6.16809e+06	5.18069e+06	5.44436e+06
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	GGETSEMYLIQPDTSSK	GGETSEMYLIQPDTSSK	3	GGETSEMYLIQPDTSSK3	2.8747e+06	2.24403e+06	2.39516e+06
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	GGETSEMYLIQPDTSSKPYR	GGETSEMYLIQPDTSSKPYR	3	GGETSEMYLIQPDTSSKPYR3	31598.1	2.14392e+07	30050.8
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	GGETSEMYLIQPDTSSKPYR	GGETSEMYLIQPDTSSKPYR	4	GGETSEMYLIQPDTSSKPYR4	246518	340831	320077
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	GGETSEMYLIQPDTSSKPYRVYCDMK	GGETSEMYLIQPDTSSKPYRVYC(UniMod:4)DMK	4	GGETSEMYLIQPDTSSKPYRVYC(UniMod:4)DMK4	2885.1		4441.61
Q4V896	Q4V896	SNX15_RAT	Snx15	Sorting nexin-15	1	GGEVTRPSEVSR	GGEVTRPSEVSR	3	GGEVTRPSEVSR3	10647.3	6045.25	12262.1
Q5XIB4	Q5XIB4	UFSP2_RAT	Ufsp2	Ufm1-specific protease 2	1	GGFDLAFQLAPPK	GGFDLAFQLAPPK	2	GGFDLAFQLAPPK2	15514.7	17083.5	20493.2
A0A8I6A6W3	A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	1	GGFDPAEK	GGFDPAEK	1	GGFDPAEK1	26263.5	39022.1	28045.9
A0A8I6A6W3	A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	1	GGFDPAEK	GGFDPAEK	2	GGFDPAEK2	1.23413e+06	1.23192e+06	1.33994e+06
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	GGFDWNLVFK	GGFDWNLVFK	2	GGFDWNLVFK2	82737.9	69170	70791.1
A0A8I5ZPK6	A0A8I5ZPK6	A0A8I5ZPK6_RAT	Kdm5a	[histone H3]-trimethyl-L-lysine(4) demethylase	1	GGFEIVTK	GGFEIVTK	2	GGFEIVTK2	507210	372133	327655
P97711	P97711;P70507;Q62833	GRK6_RAT	Grk6	G protein-coupled receptor kinase 6	0	GGFGEVCACQVR	GGFGEVC(UniMod:4)AC(UniMod:4)QVR	2	GGFGEVC(UniMod:4)AC(UniMod:4)QVR2	24752.6	24286.6	26774.5
A0A8J8YGQ6	A0A8J8YGQ6	A0A8J8YGQ6_RAT	Dhrsx	Dehydrogenase/reductase X-linked	1	GGFRPPELPLQADR	GGFRPPELPLQADR	3	GGFRPPELPLQADR3	19378.7	17180.3	17079.8
D3ZFS7	D3ZFS7	D3ZFS7_RAT	Lyplal1	palmitoyl-protein hydrolase	1	GGFSNVWFDR	GGFSNVWFDR	2	GGFSNVWFDR2	14599.7	16677.3	17732.4
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	GGFSSTQDTVVALDALSK	GGFSSTQDTVVALDALSK	2	GGFSSTQDTVVALDALSK2	69962.3	52343.2	57319.3
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	GGFSSTQDTVVALDALSK	GGFSSTQDTVVALDALSK	3	GGFSSTQDTVVALDALSK3	294836	248303	211539
Q6IE64	B5DEH7;Q6IE64	C1RL_RAT	C1rl	Complement C1r subcomponent-like protein	0	GGGALLGDR	GGGALLGDR	1	GGGALLGDR1	3882.56		
Q6IE64	B5DEH7;Q6IE64	C1RL_RAT	C1rl	Complement C1r subcomponent-like protein	0	GGGALLGDR	GGGALLGDR	2	GGGALLGDR2	2.07485e+06	1.66492e+06	1.59021e+06
Q6AYB5	Q6AYB5	SRP54_RAT	Srp54	Signal recognition particle subunit SRP54	1	GGGALSAVAATK	GGGALSAVAATK	2	GGGALSAVAATK2	17078.4	9183.33	16247.2
Q63530	Q63530	PTER_RAT	Pter	Phosphotriesterase-related protein	1	GGGAVVENTTTGLSR	GGGAVVENTTTGLSR	2	GGGAVVENTTTGLSR2	7982.22	4966.65	3463.31
Q66H24	Q66H24	CI040_RAT		Uncharacterized protein C9orf40 homolog	1	GGGDDEPELQGR	GGGDDEPELQGR	2	GGGDDEPELQGR2		5008.81	2120.35
Q68FS8	Q68FS8	Q68FS8_RAT	Rtca	RNA 3'-terminal-phosphate cyclase (ATP)	1	GGGEVIVR	GGGEVIVR	2	GGGEVIVR2	73292.1	62241.5	61028.4
Q5XIN4	Q5XIN4	Q5XIN4_RAT	Mtmr9	Myotubularin related protein 9	1	GGGFEQEAHYPQWR	GGGFEQEAHYPQWR	3	GGGFEQEAHYPQWR3	33732.8	56948.5	28656.1
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	GGGFLPMTPMAAAPEGNVK	GGGFLPMTPMAAAPEGNVK	2	GGGFLPMTPMAAAPEGNVK2	41400.9	37198	43911.6
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	GGGFLPMTPMAAAPEGNVK	GGGFLPMTPMAAAPEGNVK	3	GGGFLPMTPMAAAPEGNVK3	3323.4	7748.76	
A0A8J8YRV3	A0A8J8YRV3	A0A8J8YRV3_RAT	Drg1	Developmentally regulated GTP binding protein 1	1	GGGGGGPGEGFDVAK	GGGGGGPGEGFDVAK	2	GGGGGGPGEGFDVAK2	21809.4	25242	19429.1
Q6IMY8	Q6IMY8	HNRPU_RAT	Hnrnpu	Heterogeneous nuclear ribonucleoprotein U	1	GGGGGSGGIGYPYPR	GGGGGSGGIGYPYPR	2	GGGGGSGGIGYPYPR2	5351.96	744.873	1802
A7VJC2	A7VJC2	ROA2_RAT	Hnrnpa2b1	Heterogeneous nuclear ribonucleoproteins A2/B1	1	GGGGNFGPGPGSNFR	GGGGNFGPGPGSNFR	2	GGGGNFGPGPGSNFR2	9012.16		6934.85
Q68A21	Q68A21	PURB_RAT	Purb	Transcriptional activator protein Pur-beta	1	GGGGPGGEQETQELASK	GGGGPGGEQETQELASK	2	GGGGPGGEQETQELASK2	168307	167933	174656
Q68A21	Q68A21	PURB_RAT	Purb	Transcriptional activator protein Pur-beta	1	GGGGPGGEQETQELASKR	GGGGPGGEQETQELASKR	3	GGGGPGGEQETQELASKR3	3125.58	7238.71	5106.36
Q68A21	Q68A21	PURB_RAT	Purb	Transcriptional activator protein Pur-beta	1	GGGGPGSFQPAPR	GGGGPGSFQPAPR	2	GGGGPGSFQPAPR2	170186	187087	201314
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	GGGGSQPLRPPVGSNK	GGGGSQPLRPPVGSNK	2	GGGGSQPLRPPVGSNK2	13837.1	7787.2	4549.26
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	GGGGSQPLRPPVGSNK	GGGGSQPLRPPVGSNK	3	GGGGSQPLRPPVGSNK3	515803	555814	640500
P62250	M0R8S7;P62250	RS16_RAT	Rps16	Small ribosomal subunit protein uS9	0	GGGHVAQIYAIR	GGGHVAQIYAIR	2	GGGHVAQIYAIR2	10679.1	12212.1	10148.9
P62250	M0R8S7;P62250	RS16_RAT	Rps16	Small ribosomal subunit protein uS9	0	GGGHVAQIYAIR	GGGHVAQIYAIR	3	GGGHVAQIYAIR3	23725.8	15590.9	24168.2
F1M842	F1M842	F1M842_RAT	Tp53bp1	Tumor protein p53 binding protein 1	1	GGGLHSSSLTVECSK	GGGLHSSSLTVEC(UniMod:4)SK	3	GGGLHSSSLTVEC(UniMod:4)SK3	12814.2	9621.56	8528.02
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	GGGLTFTCHCVQPFWGLR	GGGLTFTC(UniMod:4)HC(UniMod:4)VQPFWGLR	3	GGGLTFTC(UniMod:4)HC(UniMod:4)VQPFWGLR3	4894.56		6705.31
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	GGGLTGLLVGTLDVVLDSSAR	GGGLTGLLVGTLDVVLDSSAR	3	GGGLTGLLVGTLDVVLDSSAR3	2960.22		
D3ZW38	D3ZW38	D3ZW38_RAT	Exosc6	Exosome component 6	1	GGGPAGAGGEAPAALR	GGGPAGAGGEAPAALR	2	GGGPAGAGGEAPAALR2	7978.32	4721.15	5762.47
D3Z8L7	D3Z8L7	RRAS_RAT	Rras	Ras-related protein R-Ras	1	GGGPGPRDPPPGETHK	GGGPGPRDPPPGETHK	3	GGGPGPRDPPPGETHK3			14372.5
D3Z8L7	D3Z8L7	RRAS_RAT	Rras	Ras-related protein R-Ras	1	GGGPGPRDPPPGETHK	GGGPGPRDPPPGETHK	4	GGGPGPRDPPPGETHK4			15419.2
F1M798	F1M280;F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	0	GGGPQAISIGK	GGGPQAISIGK	2	GGGPQAISIGK2	43987	32566.9	39989.3
P05197	P05197;F1LM66	EF2_RAT	Eef2	Elongation factor 2	0	GGGQIIPTAR	GGGQIIPTAR	2	GGGQIIPTAR2	262113	284822	264012
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	GGGSFVQNNQPVGLR	GGGSFVQNNQPVGLR	2	GGGSFVQNNQPVGLR2	150358	143301	167982
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	GGGSFVQNNQPVGLR	GGGSFVQNNQPVGLR	3	GGGSFVQNNQPVGLR3	37500.7	39491	37617.6
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	GGGTYTMGAFQQAAQILR	GGGTYTMGAFQQAAQILR	2	GGGTYTMGAFQQAAQILR2	55944.8	48652.3	34620.6
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	GGGTYTMGAFQQAAQILR	GGGTYTMGAFQQAAQILR	3	GGGTYTMGAFQQAAQILR3	26363.9	25923	20127.1
Q6AY30	Q6AY30	SCPDL_RAT	Sccpdh	Saccharopine dehydrogenase-like oxidoreductase	1	GGGVFTPGAAFSR	GGGVFTPGAAFSR	2	GGGVFTPGAAFSR2	141236	98244.2	137910
Q6AYT3	Q6AYT3	RTCB_RAT	Rtcb	RNA-splicing ligase RtcB homolog	1	GGGVGGFLPAMK	GGGVGGFLPAMK	2	GGGVGGFLPAMK2	27092.7	34442.4	26357
A0A0U1RS29	A0A0U1RS29	A0A0U1RS29_RAT	Rgl2	Ral guanine nucleotide dissociation stimulator-like 2	1	GGGVVPYLGTFLK	GGGVVPYLGTFLK	2	GGGVVPYLGTFLK2	10673.2	6933.09	18542.3
A0A8I5ZTB8	A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	GGGYESEDAYQNAELVFLDIHNIHVMR	GGGYESEDAYQNAELVFLDIHNIHVMR	4	GGGYESEDAYQNAELVFLDIHNIHVMR4	4182.1	13320.9	2395.59
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	GGHDILVR	GGHDILVR	2	GGHDILVR2	13143	25388.2	11210.3
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	GGHFAAFEEPK	GGHFAAFEEPK	2	GGHFAAFEEPK2	9983.15	7014.54	3643.05
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	GGHFAAFEEPK	GGHFAAFEEPK	3	GGHFAAFEEPK3	54148.1	21856.7	67940.6
Q5I0K8	Q5I0K8	RT07_RAT	Mrps7	Small ribosomal subunit protein uS7m	1	GGHFYQVPVPLADR	GGHFYQVPVPLADR	3	GGHFYQVPVPLADR3		5059.05	3970.92
D3ZSY8	D3ZSY8	D3ZSY8_RAT	Tbc1d10b	TBC1 domain family, member 10b	1	GGHGQQDLYR	GGHGQQDLYR	2	GGHGQQDLYR2		17590.7	
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GGHLCSCAR	GGHLC(UniMod:4)SC(UniMod:4)AR	2	GGHLC(UniMod:4)SC(UniMod:4)AR2			61417.9
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	GGHMSLMLPGYNQAAGK	GGHMSLMLPGYNQAAGK	3	GGHMSLMLPGYNQAAGK3	12709.4	22487	16430
Q9JIA3	Q9JIA3	IKBB_RAT	Nfkbib	NF-kappa-B inhibitor beta	1	GGHTALHLACR	GGHTALHLAC(UniMod:4)R	3	GGHTALHLAC(UniMod:4)R3	3113.67	3627.52	
B2GV06	B2GV06	SCOT1_RAT	Oxct1	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial	1	GGHVNLTMLGAMQVSK	GGHVNLTMLGAMQVSK	2	GGHVNLTMLGAMQVSK2	4733	5302.62	2645.74
B2GV06	B2GV06	SCOT1_RAT	Oxct1	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial	1	GGHVNLTMLGAMQVSK	GGHVNLTMLGAMQVSK	3	GGHVNLTMLGAMQVSK3	50376.4	44083.3	63257.1
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	GGIADSVAK	GGIADSVAK	1	GGIADSVAK1	2936.18	2416.93	
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	GGIADSVAK	GGIADSVAK	2	GGIADSVAK2	114655	128241	146968
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	GGICHNTEGSYR	GGIC(UniMod:4)HNTEGSYR	2	GGIC(UniMod:4)HNTEGSYR2	2718.29		4857.9
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	GGICHNTEGSYR	GGIC(UniMod:4)HNTEGSYR	3	GGIC(UniMod:4)HNTEGSYR3	13102.8		
Q5M888	Q5M888	CG025_RAT		UPF0415 protein C7orf25 homolog	1	GGIEGGAK	GGIEGGAK	1	GGIEGGAK1	11797.4	54485.3	67509.1
P26772	P26772	CH10_RAT	Hspe1	10 kDa heat shock protein, mitochondrial	1	GGIMLPEK	GGIMLPEK	1	GGIMLPEK1	13932.6	11432.4	7743.43
P26772	P26772	CH10_RAT	Hspe1	10 kDa heat shock protein, mitochondrial	1	GGIMLPEK	GGIMLPEK	2	GGIMLPEK2	1.12295e+06	997844	1.08845e+06
A0A8J8YRV3	A0A8J8YRV3	A0A8J8YRV3_RAT	Drg1	Developmentally regulated GTP binding protein 1	1	GGINLTATCPQSELDAETVK	GGINLTATC(UniMod:4)PQSELDAETVK	3	GGINLTATC(UniMod:4)PQSELDAETVK3	3306.54		
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GGINQVGLAFESTK	GGINQVGLAFESTK	2	GGINQVGLAFESTK2	83039.5	93421.7	78237.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GGINQVGLAFESTK	GGINQVGLAFESTK	3	GGINQVGLAFESTK3	70838.5	80188.7	89983.7
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	GGISGYTLR	GGISGYTLR	2	GGISGYTLR2	43479.8	40397.5	43557.9
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	GGITPGPEAPEPPPK	GGITPGPEAPEPPPK	2	GGITPGPEAPEPPPK2	78072.2	92867.4	90149.8
O54947	O54947	HAVR1_RAT	Havcr1	Hepatitis A virus cellular receptor 1 homolog	1	GGITTTCWGR	GGITTTC(UniMod:4)WGR	2	GGITTTC(UniMod:4)WGR2	6657.76		8777.79
O08651	A0A8I5ZZR2;O08651	SERA_RAT	Phgdh	D-3-phosphoglycerate dehydrogenase	0	GGIVDEGALLR	GGIVDEGALLR	2	GGIVDEGALLR2	16382.3	8334.94	11707.3
O70351	O70351	HCD2_RAT	Hsd17b10	3-hydroxyacyl-CoA dehydrogenase type-2	1	GGIVGMTLPIAR	GGIVGMTLPIAR	2	GGIVGMTLPIAR2	261379	188914	214297
Q5U300	Q5U300;A0A8I5ZVX0;A0A8I6A544	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	0	GGIVSQVK	GGIVSQVK	1	GGIVSQVK1	2717.21	5430.68	
Q5U300	Q5U300;A0A8I5ZVX0;A0A8I6A544	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	0	GGIVSQVK	GGIVSQVK	2	GGIVSQVK2	223444	182021	235715
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	GGKPEEVVADGR	GGKPEEVVADGR	2	GGKPEEVVADGR2	16290.2	29258	15615.7
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	GGKPEEVVADGR	GGKPEEVVADGR	3	GGKPEEVVADGR3	28207.7	81876	98986
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	GGLAGEFQR	GGLAGEFQR	2	GGLAGEFQR2	56065.4	57272	51874.8
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	GGLAHPESEDAK	GGLAHPESEDAK	2	GGLAHPESEDAK2	51631	46718.9	39826.7
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	GGLAHPESEDAK	GGLAHPESEDAK	3	GGLAHPESEDAK3	56345.3	72664.4	62029.8
Q8CGU4	Q8CGU4	AGAP2_RAT	Agap2	Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2	1	GGLALALVGTQDR	GGLALALVGTQDR	2	GGLALALVGTQDR2		4002.37	4151.5
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	GGLALWQGCTQPGGVLACPASTLLSQLK	GGLALWQGC(UniMod:4)TQPGGVLAC(UniMod:4)PASTLLSQLK	3	GGLALWQGC(UniMod:4)TQPGGVLAC(UniMod:4)PASTLLSQLK3	22732.6	17743.4	19861.2
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	GGLDSEVSGPTALGIK	GGLDSEVSGPTALGIK	2	GGLDSEVSGPTALGIK2	232224	238611	240479
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	GGLDSEVSGPTALGIK	GGLDSEVSGPTALGIK	3	GGLDSEVSGPTALGIK3	1768.31		766.101
P03994	P03994	HPLN1_RAT	Hapln1	Hyaluronan and proteoglycan link protein 1	1	GGLDWCNAGWLSDGSVQYPITKPR	GGLDWC(UniMod:4)NAGWLSDGSVQYPITKPR	3	GGLDWC(UniMod:4)NAGWLSDGSVQYPITKPR3	7175.64	12215.6	11096.8
D3ZVN7	D3ZVN7	D3ZVN7_RAT	Ppox	Amine oxidase	1	GGLEMLPQALHNYLTSK	GGLEMLPQALHNYLTSK	3	GGLEMLPQALHNYLTSK3	12644.1	20807.3	17324.3
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	GGLEVADEALVGYVAK	GGLEVADEALVGYVAK	2	GGLEVADEALVGYVAK2	21908.4	21176.5	22083.4
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	GGLEVILAPEGSR	GGLEVILAPEGSR	2	GGLEVILAPEGSR2	19625.7	27842.5	21515.1
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	GGLGLAGAK	GGLGLAGAK	1	GGLGLAGAK1	7094.08	5324.77	
Q9Z2X3	Q9Z2X3	PSD10_RAT	Psmd10	26S proteasome non-ATPase regulatory subunit 10	1	GGLGLILK	GGLGLILK	2	GGLGLILK2	71767.5	62715.6	51144.5
P23377	P23377	FURIN_RAT	Furin	Furin	1	GGLGSIFVWASGNGGR	GGLGSIFVWASGNGGR	2	GGLGSIFVWASGNGGR2	4816.38		3804.36
E9PU10	E9PU10	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	1	GGLGSSVVQALK	GGLGSSVVQALK	2	GGLGSSVVQALK2	52004.6	42523.1	73797.7
P47858	P47858	PFKAM_RAT	Pfkm	ATP-dependent 6-phosphofructokinase, muscle type	1	GGLHTVAVMNVGAPAAGMNAAVR	GGLHTVAVMNVGAPAAGMNAAVR	3	GGLHTVAVMNVGAPAAGMNAAVR3	21192.1	19832.8	15095.2
Q7TS56	Q7TS56	CBR4_RAT	Cbr4	3-oxoacyl-[acyl-carrier-protein] reductase	1	GGLIGFSR	GGLIGFSR	2	GGLIGFSR2	16430.6	16685.3	11317.4
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	GGLIGLAACSIALGK	GGLIGLAAC(UniMod:4)SIALGK	2	GGLIGLAAC(UniMod:4)SIALGK2	17053.1	12817.2	17643.1
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	GGLISASIK	GGLISASIK	1	GGLISASIK1	3231.59	3953.43	
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	GGLISASIK	GGLISASIK	2	GGLISASIK2	165847	206798	197438
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	GGLLCSTQPPPK	GGLLC(UniMod:4)STQPPPK	2	GGLLC(UniMod:4)STQPPPK2	5.96161e+06	6.46338e+06	7.27662e+06
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	GGLLCSTQPPPK	GGLLC(UniMod:4)STQPPPK	3	GGLLC(UniMod:4)STQPPPK3	324188	358901	447359
P29066	P29066	ARRB1_RAT	Arrb1	Beta-arrestin-1	1	GGLLGDLASSDVAVELPFTLMHPK	GGLLGDLASSDVAVELPFTLMHPK	3	GGLLGDLASSDVAVELPFTLMHPK3	10524.7	5876.4	
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	GGLSAVDAFEIHVHK	GGLSAVDAFEIHVHK	3	GGLSAVDAFEIHVHK3	23359.5	16911.6	15199.4
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	GGLSAVDAFEIHVHK	GGLSAVDAFEIHVHK	4	GGLSAVDAFEIHVHK4	17709.7	11824	16399.8
Q02563	Q02563	SV2A_RAT	Sv2a	Synaptic vesicle glycoprotein 2A	1	GGLSDGEGPPGGR	GGLSDGEGPPGGR	2	GGLSDGEGPPGGR2	13601.4	12824.7	15987.5
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	GGLSHSLR	GGLSHSLR	2	GGLSHSLR2	4085.21	5992.78	4434.61
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	GGLSHSLRK	GGLSHSLRK	2	GGLSHSLRK2			12403.2
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	GGLSLQGSR	GGLSLQGSR	2	GGLSLQGSR2	147312	196186	201962
D3ZES2	D3ZES2	D3ZES2_RAT	Trappc6b	Trafficking protein particle complex subunit 6B	1	GGLSNLGIK	GGLSNLGIK	2	GGLSNLGIK2	37842.4	30161.9	40420.5
Q8K1Q0	Q8K1Q0	NMT1_RAT	Nmt1	Glycylpeptide N-tetradecanoyltransferase 1	1	GGLSPANDTGAK	GGLSPANDTGAK	2	GGLSPANDTGAK2	18321.1	13098.7	2929.67
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	GGLSTFFEAQDALSAIHQK	GGLSTFFEAQDALSAIHQK	3	GGLSTFFEAQDALSAIHQK3	24942.7	9998.94	22845.9
D3ZR49	D3ZR49	D3ZR49_RAT	Man1a2	alpha-1,2-Mannosidase	1	GGLVFIGEWK	GGLVFIGEWK	2	GGLVFIGEWK2	20925.4	25608.1	19882.3
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	GGLYIVTEYMAK	GGLYIVTEYMAK	2	GGLYIVTEYMAK2	45389.9	27881.4	36064.8
P47752	P47752	S1PR2_RAT	S1pr2	Sphingosine 1-phosphate receptor 2	1	GGLYSEYLNPEK	GGLYSEYLNPEK	2	GGLYSEYLNPEK2	3529.93	6626.9	
D3ZRN5	D3ZRN5	D3ZRN5_RAT	Ro60	Ro60, Y RNA binding protein	1	GGMAVALAVTK	GGMAVALAVTK	2	GGMAVALAVTK2	9850.69	7554.63	4022.78
Q4FZU0	Q4FZU0	Q4FZU0_RAT	Acp6	Acid phosphatase 6, lysophosphatidic	1	GGMFAGQLTK	GGMFAGQLTK	2	GGMFAGQLTK2	22778.6	18120.8	19832.1
Q5XIU5	Q5XIU5	PSMF1_RAT	Psmf1	Proteasome inhibitor PI31 subunit	1	GGMIVDPLR	GGMIVDPLR	2	GGMIVDPLR2	16185.7	14751.5	15083
D4A7F6	D4A7F6	D4A7F6_RAT	Colec10	Collectin subfamily member 10	1	GGMLAMPK	GGMLAMPK	1	GGMLAMPK1	29490.4	26378.5	32689.5
D4A7F6	D4A7F6	D4A7F6_RAT	Colec10	Collectin subfamily member 10	1	GGMLAMPK	GGMLAMPK	2	GGMLAMPK2	507793	566682	537450
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	GGMLCTLWK	GGMLC(UniMod:4)TLWK	2	GGMLC(UniMod:4)TLWK2	6037.03	17806.1	16727.2
Q561Q9	Q561Q9	Q561Q9_RAT	Ctsw	Cathepsin W	1	GGMQTGTLLSHSR	GGMQTGTLLSHSR	2	GGMQTGTLLSHSR2	21007.7	6537.92	13167.2
Q561Q9	Q561Q9	Q561Q9_RAT	Ctsw	Cathepsin W	1	GGMQTGTLLSHSR	GGMQTGTLLSHSR	3	GGMQTGTLLSHSR3	23080.2	25466.6	36914.7
A1EC81	A1EC81	A1EC81_RAT	Mmp28	Matrix metallopeptidase 28	1	GGMQVEPYYPR	GGMQVEPYYPR	2	GGMQVEPYYPR2	3202.12	7814.22	3348.07
P19468	P19468	GSH1_RAT	Gclc	Glutamate--cysteine ligase catalytic subunit	1	GGNAVVDGCSK	GGNAVVDGC(UniMod:4)SK	2	GGNAVVDGC(UniMod:4)SK2	7022.84	3717.89	
A0A8I5ZXB9	A0A8I5ZXB9	A0A8I5ZXB9_RAT	Kifap3	Kinesin-associated protein 3	1	GGNIDVHPSEK	GGNIDVHPSEK	2	GGNIDVHPSEK2	3762.75		2918.07
A0A8I5ZXB9	A0A8I5ZXB9	A0A8I5ZXB9_RAT	Kifap3	Kinesin-associated protein 3	1	GGNIDVHPSEK	GGNIDVHPSEK	3	GGNIDVHPSEK3	19841.2	19085	20895.1
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	GGNIGDGGGAADR	GGNIGDGGGAADR	2	GGNIGDGGGAADR2	1.43462e+06	1.27077e+06	1.61183e+06
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	GGNIQQYTYK	GGNIQQYTYK	2	GGNIQQYTYK2	276539	294510	267842
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	GGNLGENQIK	GGNLGENQIK	2	GGNLGENQIK2	674713	705139	677371
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	GGNLGENQIKDEK	GGNLGENQIKDEK	2	GGNLGENQIKDEK2	76957.7	79949.5	63184.9
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	GGNLGENQIKDEK	GGNLGENQIKDEK	3	GGNLGENQIKDEK3	890448	834429	1.00637e+06
D3ZV75	D3ZV75	D3ZV75_RAT	Mfsd1	Major facilitator superfamily domain containing 1	1	GGNLNYSAK	GGNLNYSAK	2	GGNLNYSAK2	4686.53	7276.58	8638.51
D3Z8M3	D3Z8M3	D3Z8M3_RAT	Khnyn	KH and NYN domain containing	1	GGNLVTGTQR	GGNLVTGTQR	2	GGNLVTGTQR2	7054.67	8018.31	
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	GGNNLVSGYPK	GGNNLVSGYPK	2	GGNNLVSGYPK2	1.2512e+06	1.27127e+06	1.08871e+06
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	GGNNSFTHEALTLK	GGNNSFTHEALTLK	2	GGNNSFTHEALTLK2	1931.93	1338	
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	GGNNSFTHEALTLK	GGNNSFTHEALTLK	3	GGNNSFTHEALTLK3	18761.8	19024.8	19240.7
Q08420	Q08420	SODE_RAT	Sod3	Extracellular superoxide dismutase [Cu-Zn]	1	GGNQASVQNGNAGR	GGNQASVQNGNAGR	2	GGNQASVQNGNAGR2			31639.8
Q8R508	Q8R508	FAT3_RAT	Fat3	Protocadherin Fat 3	1	GGNSAILNR	GGNSAILNR	2	GGNSAILNR2	1342.06	3759.6	
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	GGNTAILNR	GGNTAILNR	2	GGNTAILNR2	41508	47178.8	44948.7
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	GGNTLTGLALNFIFENSFKPEAGSR	GGNTLTGLALNFIFENSFKPEAGSR	3	GGNTLTGLALNFIFENSFKPEAGSR3	16691.8	9349.26	5123.86
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	GGNWYAMENSR	GGNWYAMENSR	2	GGNWYAMENSR2	31549	36041.5	27606
B2GV55	B2GV55	B2GV55_RAT	Ube2q1	Ubiquitin conjugating enzyme E2 Q1	1	GGNYAVELVNDSLYDWNVK	GGNYAVELVNDSLYDWNVK	3	GGNYAVELVNDSLYDWNVK3		6658.39	
D3ZXD8	D3ZXD8	TM245_RAT	Tmem245	Transmembrane protein 245	1	GGPAEEPSPR	GGPAEEPSPR	2	GGPAEEPSPR2		85754.1	
D3ZR64	D3ZR64	D3ZR64_RAT	Zfp598	RING-type E3 ubiquitin transferase	1	GGPAPVDEDSGGLTVQELR	GGPAPVDEDSGGLTVQELR	2	GGPAPVDEDSGGLTVQELR2	2625.99		1949.89
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	GGPAQDLTFR	GGPAQDLTFR	2	GGPAQDLTFR2	200363	244085	217806
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	GGPASVPSASPGTSVK	GGPASVPSASPGTSVK	2	GGPASVPSASPGTSVK2	116282	121659	117486
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	GGPAVQQNIPSNLLQDHENQR	GGPAVQQNIPSNLLQDHENQR	3	GGPAVQQNIPSNLLQDHENQR3	83523.2	77213.7	90669.6
A0A8I6AI88	A0A8I6AI88	A0A8I6AI88_RAT	Chpf2	Hexosyltransferase	1	GGPDPFLGVK	GGPDPFLGVK	2	GGPDPFLGVK2	13229.7	18147.5	18289
D3ZFJ3	D3ZFJ3	3BP1_RAT	Sh3bp1	SH3 domain-binding protein 1	1	GGPEAVGGHPPTPVLPPQPR	GGPEAVGGHPPTPVLPPQPR	3	GGPEAVGGHPPTPVLPPQPR3	12332.6	8747.49	7004.31
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	GGPEPPASGEMDDNSLSPEACYECK	GGPEPPASGEMDDNSLSPEAC(UniMod:4)YEC(UniMod:4)K	3	GGPEPPASGEMDDNSLSPEAC(UniMod:4)YEC(UniMod:4)K3	8132.32	12157.4	16833.7
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	GGPGGELPR	GGPGGELPR	2	GGPGGELPR2	474697	599166	506652
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	GGPGPLAGHPQVSR	GGPGPLAGHPQVSR	2	GGPGPLAGHPQVSR2	4007.04		
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	GGPGPLAGHPQVSR	GGPGPLAGHPQVSR	3	GGPGPLAGHPQVSR3	90151.7	87429.9	69788.3
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	GGPGQPGFEGEQGTR	GGPGQPGFEGEQGTR	2	GGPGQPGFEGEQGTR2	5798.77	13840.8	
A0A8I6AEI1	A0A8I6AEI1	A0A8I6AEI1_RAT	Hps1	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1	1	GGPHLPQHLQSQAQK	GGPHLPQHLQSQAQK	3	GGPHLPQHLQSQAQK3	3806.74	8321.27	4064.09
A0A8I6ANR6	A0A8I6ANR6	A0A8I6ANR6_RAT	Chuk	IkappaB kinase	1	GGPIDPPLKQPK	GGPIDPPLKQPK	3	GGPIDPPLKQPK3	5079.14	6162.87	12698.6
M0RA86	M0RA86	M0RA86_RAT	Ccdc9	Coiled-coil domain containing 9	1	GGPLEESER	GGPLEESER	2	GGPLEESER2	15023.1	18909.6	18624.5
Q4FZU4	Q4FZU4	ATL4_RAT	Adamtsl4	ADAMTS-like protein 4	1	GGPLGYQK	GGPLGYQK	2	GGPLGYQK2	13767.6	10987.5	9974.39
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	GGPNIITLADIVK	GGPNIITLADIVK	2	GGPNIITLADIVK2	37150.4	29247.8	30313.6
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	GGPNIITLADIVKDPVSR	GGPNIITLADIVKDPVSR	2	GGPNIITLADIVKDPVSR2	5170.49	5103.88	7817.44
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	GGPNIITLADIVKDPVSR	GGPNIITLADIVKDPVSR	3	GGPNIITLADIVKDPVSR3	121296	113130	120400
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	GGPNYQEGLR	GGPNYQEGLR	2	GGPNYQEGLR2	22884.2	23662.8	29827.1
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	GGPPCKPPAPEDEDEAWR	GGPPC(UniMod:4)KPPAPEDEDEAWR	3	GGPPC(UniMod:4)KPPAPEDEDEAWR3	10827	17761.8	9376.72
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	GGPPGPPVNR	GGPPGPPVNR	2	GGPPGPPVNR2	393296	432049	358666
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	GGPPPPPPPATGR	GGPPPPPPPATGR	2	GGPPPPPPPATGR2	152426	135427	140980
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	GGPPPPPPPATGR	GGPPPPPPPATGR	3	GGPPPPPPPATGR3	33112.2	20194	32064.1
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	GGPRPVSSSIDPSLLSTK	GGPRPVSSSIDPSLLSTK	3	GGPRPVSSSIDPSLLSTK3	18762.5	23179.8	20773.4
A0A0G2K5E4	A0A0G2K5E4	A0A0G2K5E4_RAT	Dnaja3	DnaJ heat shock protein family (Hsp40) member A3	1	GGPSVDPEELFR	GGPSVDPEELFR	2	GGPSVDPEELFR2	16124.4	12485.1	18909.7
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	GGPTPGLNFFQDTPDFR	GGPTPGLNFFQDTPDFR	2	GGPTPGLNFFQDTPDFR2	38407.2	26482.8	25403.8
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	GGPTPGLNFFQDTPDFR	GGPTPGLNFFQDTPDFR	3	GGPTPGLNFFQDTPDFR3	22386.6		20512.8
A0A8I5ZP83	A0A8I5ZP83	A0A8I5ZP83_RAT	Chmp4b	Charged multivesicular body protein 4B	1	GGPTPQEAIQR	GGPTPQEAIQR	2	GGPTPQEAIQR2	452522	486804	454168
Q9JHU5	Q9JHU5	ARFP1_RAT	Arfip1	Arfaptin-1	1	GGPVILADEIK	GGPVILADEIK	2	GGPVILADEIK2	70659.6	71875.4	65977.5
Q9JHU5	Q9JHU5	ARFP1_RAT	Arfip1	Arfaptin-1	1	GGPVILADEIKNPAMEK	GGPVILADEIKNPAMEK	3	GGPVILADEIKNPAMEK3	52804	55607.8	44902.2
Q68FP9	Q68FP9	COG6_RAT	Cog6	Conserved oligomeric Golgi complex subunit 6	1	GGPVTEDFFK	GGPVTEDFFK	2	GGPVTEDFFK2	53227.1	55586	37622
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	GGQELQR	GGQELQR	2	GGQELQR2			22940.6
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	GGQESQHDQLVVR	GGQESQHDQLVVR	2	GGQESQHDQLVVR2	7426.42	8243.23	5935.3
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	GGQESQHDQLVVR	GGQESQHDQLVVR	3	GGQESQHDQLVVR3	318152	364073	343793
P14423	P14423	PA2GA_RAT	Pla2g2a	Phospholipase A2, membrane associated	1	GGQISCSTNQDSCR	GGQISC(UniMod:4)STNQDSC(UniMod:4)R	2	GGQISC(UniMod:4)STNQDSC(UniMod:4)R2	549131	500821	543090
P14423	P14423	PA2GA_RAT	Pla2g2a	Phospholipase A2, membrane associated	1	GGQISCSTNQDSCR	GGQISC(UniMod:4)STNQDSC(UniMod:4)R	3	GGQISC(UniMod:4)STNQDSC(UniMod:4)R3	18128	12526.9	18340.3
P14423	P14423	PA2GA_RAT	Pla2g2a	Phospholipase A2, membrane associated	1	GGQISCSTNQDSCRK	GGQISC(UniMod:4)STNQDSC(UniMod:4)RK	2	GGQISC(UniMod:4)STNQDSC(UniMod:4)RK2			81895.6
P14423	P14423	PA2GA_RAT	Pla2g2a	Phospholipase A2, membrane associated	1	GGQISCSTNQDSCRK	GGQISC(UniMod:4)STNQDSC(UniMod:4)RK	3	GGQISC(UniMod:4)STNQDSC(UniMod:4)RK3			244702
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	GGQLQEQLTQQLSQALSSAVAGR	GGQLQEQLTQQLSQALSSAVAGR	3	GGQLQEQLTQQLSQALSSAVAGR3	7987.88	12434.9	19126.2
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	GGQTASFALK	GGQTASFALK	2	GGQTASFALK2	28394.4	26770.8	33381.6
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	GGQTQCEELVAYLR	GGQTQC(UniMod:4)EELVAYLR	2	GGQTQC(UniMod:4)EELVAYLR2	96565.3	69588	93261.1
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	GGQTQCEELVAYLR	GGQTQC(UniMod:4)EELVAYLR	3	GGQTQC(UniMod:4)EELVAYLR3	35154.9	50067.9	40862.7
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	GGQTQCEELVAYLRDESEFR	GGQTQC(UniMod:4)EELVAYLRDESEFR	3	GGQTQC(UniMod:4)EELVAYLRDESEFR3	89060.1	91769.8	111832
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	GGQTQCEELVAYLRDESEFRDK	GGQTQC(UniMod:4)EELVAYLRDESEFRDK	4	GGQTQC(UniMod:4)EELVAYLRDESEFRDK4	23823	22911.8	34486.9
D3ZED8	D3ZED8	D3ZED8_RAT	Pmel	Premelanosome protein	1	GGQVSLK	GGQVSLK	1	GGQVSLK1	6693.89	3570.12	8042.94
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	GGQVSVCPVPGVGSR	GGQVSVC(UniMod:4)PVPGVGSR	2	GGQVSVC(UniMod:4)PVPGVGSR2	139138	119134	131227
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	GGQVVNLMNQR	GGQVVNLMNQR	2	GGQVVNLMNQR2	76396.9	87758.4	63902.6
G3V9S9	G3V9S9	G3V9S9_RAT	Sec24d	SEC24 homolog D, COPII coat complex component	1	GGQVYTTNTR	GGQVYTTNTR	2	GGQVYTTNTR2	10782.9	6766.27	11540.2
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	GGQWSPSPLSVQCIPVR	GGQWSPSPLSVQC(UniMod:4)IPVR	2	GGQWSPSPLSVQC(UniMod:4)IPVR2	41193.3	41843.6	39908.8
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	GGQWSPSPLSVQCIPVR	GGQWSPSPLSVQC(UniMod:4)IPVR	3	GGQWSPSPLSVQC(UniMod:4)IPVR3	51413.7	62218.1	74524.7
Q02563	Q02563	SV2A_RAT	Sv2a	Synaptic vesicle glycoprotein 2A	1	GGQYFNDK	GGQYFNDK	2	GGQYFNDK2	14455.7	7128.07	14689.8
O35820	O35820	DNPH1_RAT	Dnph1	2'-deoxynucleoside 5'-phosphate N-hydrolase 1	1	GGREDQALYAR	GGREDQALYAR	3	GGREDQALYAR3	11134.5	8244.19	16966.8
Q4FZX7	Q4FZX7	SRPRB_RAT	Srprb	Signal recognition particle receptor subunit beta	1	GGRGDAGSADVQDLEK	GGRGDAGSADVQDLEK	3	GGRGDAGSADVQDLEK3		5872.51	5501.59
Q5M827	Q5M827	PIR_RAT	Pir	Pirin	1	GGRPGGFPDHPHR	GGRPGGFPDHPHR	3	GGRPGGFPDHPHR3	34930.7	44394.4	33929.2
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	GGSADPVDYLTASPR	GGSADPVDYLTASPR	2	GGSADPVDYLTASPR2	7814.59	4613.35	7681.22
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	GGSASVWSER	GGSASVWSER	2	GGSASVWSER2	53539.8	32909.4	30049.6
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	GGSCLISGLHAGQSYWLQLR	GGSC(UniMod:4)LISGLHAGQSYWLQLR	3	GGSC(UniMod:4)LISGLHAGQSYWLQLR3	68651	63603.8	47721.9
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	GGSDPETTGIQIWSEVFTVK	GGSDPETTGIQIWSEVFTVK	3	GGSDPETTGIQIWSEVFTVK3	26451.1	16778.6	22013.9
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	GGSDTLAMR	GGSDTLAMR	2	GGSDTLAMR2	22407.2	18055.7	17664
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	GGSEVEGGR	GGSEVEGGR	2	GGSEVEGGR2			102151
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	GGSFLTGK	GGSFLTGK	2	GGSFLTGK2	17998	14784.7	17853.6
B2RYK9	B2RYK9	B2RYK9_RAT	Dmkn	Dermokine	1	GGSGGGGNRPECNNPGNDVR	GGSGGGGNRPEC(UniMod:4)NNPGNDVR	3	GGSGGGGNRPEC(UniMod:4)NNPGNDVR3	10502.8		10955.6
B0BNA1	B0BNA1	SH3Y1_RAT	Sh3yl1	SH3 domain-containing YSC84-like protein 1	1	GGSGIVLAR	GGSGIVLAR	2	GGSGIVLAR2	5607.22	5485.29	2394.79
Q9JL55	Q9JL55	GDE1_RAT	Gde1	Glycerophosphodiester phosphodiesterase 1	1	GGSHDAPENTLAAIR	GGSHDAPENTLAAIR	2	GGSHDAPENTLAAIR2	6955.6	6994.24	5696.91
Q9JL55	Q9JL55	GDE1_RAT	Gde1	Glycerophosphodiester phosphodiesterase 1	1	GGSHDAPENTLAAIR	GGSHDAPENTLAAIR	3	GGSHDAPENTLAAIR3	82909.2	95562.1	87783.2
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	GGSLAQPADR	GGSLAQPADR	1	GGSLAQPADR1	1651.68	3634.68	4256.79
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	GGSLAQPADR	GGSLAQPADR	2	GGSLAQPADR2	4.1212e+06	4.42775e+06	3.84025e+06
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	GGSLAQPADRQQMDALSR	GGSLAQPADRQQMDALSR	3	GGSLAQPADRQQMDALSR3	7164.12	9034.67	17260
D4A7F0	D4A7F0	D4A7F0_RAT	Ubr3	E3 ubiquitin-protein ligase	1	GGSLCSGGASTAGK	GGSLC(UniMod:4)SGGASTAGK	2	GGSLC(UniMod:4)SGGASTAGK2	7177.15	4065.7	
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	GGSLPAGHQVHGHILR	GGSLPAGHQVHGHILR	4	GGSLPAGHQVHGHILR4	3821.38	11755.2	4264.27
D4A5G8	Q06437;D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	GGSMHMYAK	GGSMHMYAK	2	GGSMHMYAK2	5125.07	9219.84	6775.56
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	GGSNAIYWASR	GGSNAIYWASR	2	GGSNAIYWASR2	21092	30116.4	33640.5
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	GGSNCLEIK	GGSNC(UniMod:4)LEIK	2	GGSNC(UniMod:4)LEIK2	2451.99	3300.41	3437.76
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	GGSPGVPMNR	GGSPGVPMNR	2	GGSPGVPMNR2	33879.5	47380.9	47920.2
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	GGSPHSPAWNGYTPLHIAAK	GGSPHSPAWNGYTPLHIAAK	4	GGSPHSPAWNGYTPLHIAAK4	7900.03	2720.75	3399.19
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	GGSPLNTGR	GGSPLNTGR	2	GGSPLNTGR2	18565.5	20880.6	13864.2
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	GGSPSALWEITWER	GGSPSALWEITWER	2	GGSPSALWEITWER2	13393.9	16935	11002.6
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	GGSQGEEVGELPR	GGSQGEEVGELPR	2	GGSQGEEVGELPR2	51154.3	49443.1	48545.8
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	GGSQLSVDR	GGSQLSVDR	2	GGSQLSVDR2	39984.1	28553.7	31132.1
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	GGSQMDLLQR	GGSQMDLLQR	2	GGSQMDLLQR2	261760	267628	283061
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	GGSQMTFLVTFDVSPK	GGSQMTFLVTFDVSPK	2	GGSQMTFLVTFDVSPK2	12319.3	8913.81	7721.81
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	GGSQPGELQIHWEAPAPEISNFLR	GGSQPGELQIHWEAPAPEISNFLR	3	GGSQPGELQIHWEAPAPEISNFLR3	60296.5	55633.6	55274.4
A0A096MJT6	A0A096MJT6	A0A096MJT6_RAT	Bltp1	Similar to RIKEN cDNA D630029K19	1	GGSSYNHETETIFALPR	GGSSYNHETETIFALPR	3	GGSSYNHETETIFALPR3	3885.17	5326.43	
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	GGSTATTFAMAELQK	GGSTATTFAMAELQK	2	GGSTATTFAMAELQK2	11092.2	17232	8994.67
A0A8I6ACU2	A0A8I6ACU2	A0A8I6ACU2_RAT	Ubap2l	Ubiquitin associated protein 2-like	1	GGSTTGSQFLEQFK	GGSTTGSQFLEQFK	2	GGSTTGSQFLEQFK2	13047.6	13678.2	10243.3
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	GGSWVVIDPTINPR	GGSWVVIDPTINPR	2	GGSWVVIDPTINPR2	20936.8	4586.91	6925.42
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	GGTCVNTPNGPHCLCPEHLTGK	GGTC(UniMod:4)VNTPNGPHC(UniMod:4)LC(UniMod:4)PEHLTGK	3	GGTC(UniMod:4)VNTPNGPHC(UniMod:4)LC(UniMod:4)PEHLTGK3	15806.5	18671.6	12792
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	GGTCVNTPNGPHCLCPEHLTGK	GGTC(UniMod:4)VNTPNGPHC(UniMod:4)LC(UniMod:4)PEHLTGK	4	GGTC(UniMod:4)VNTPNGPHC(UniMod:4)LC(UniMod:4)PEHLTGK4	14120.8	14147.3	15467.7
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	GGTEQPDHAGSLELR	GGTEQPDHAGSLELR	2	GGTEQPDHAGSLELR2	2537.53		5893.86
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	GGTEQPDHAGSLELR	GGTEQPDHAGSLELR	3	GGTEQPDHAGSLELR3	67632.2	75935.3	71073.4
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	GGTFQMGGSSSHNRPSGSNVDTLLR	GGTFQMGGSSSHNRPSGSNVDTLLR	3	GGTFQMGGSSSHNRPSGSNVDTLLR3	5022.04	6766.3	2859.3
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	GGTFQMGGSSSHNRPSGSNVDTLLR	GGTFQMGGSSSHNRPSGSNVDTLLR	4	GGTFQMGGSSSHNRPSGSNVDTLLR4	8106.97	9032.15	8889.6
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	GGTFYIEPAER	GGTFYIEPAER	2	GGTFYIEPAER2	26091.7	25496.8	22656.2
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	GGTGLNAGSALSYVHANHFTEAGGSR	GGTGLNAGSALSYVHANHFTEAGGSR	4	GGTGLNAGSALSYVHANHFTEAGGSR4	7889.87	7088.06	7224.08
Q62796	Q62796	RBP1_RAT	Ralbp1	RalA-binding protein 1	1	GGTGPLPCEGVLEVR	GGTGPLPC(UniMod:4)EGVLEVR	2	GGTGPLPC(UniMod:4)EGVLEVR2		30049.3	20125.6
Q642B4	Q642B4	Q642B4_RAT	Clec14a	C-type lectin domain containing 14A	1	GGTLSTVQSGSELQAVLK	GGTLSTVQSGSELQAVLK	2	GGTLSTVQSGSELQAVLK2	13818.9	13561.5	9213.43
Q642B4	Q642B4	Q642B4_RAT	Clec14a	C-type lectin domain containing 14A	1	GGTLSTVQSGSELQAVLK	GGTLSTVQSGSELQAVLK	3	GGTLSTVQSGSELQAVLK3	1267.79	6629.44	3288.08
A0A0G2K542	A0A0G2K542	A0A0G2K542_RAT	Ugp2	UTP--glucose-1-phosphate uridylyltransferase	1	GGTLTQYEGK	GGTLTQYEGK	2	GGTLTQYEGK2	24361.4	18756.7	5304.31
Q68FS8	Q68FS8	Q68FS8_RAT	Rtca	RNA 3'-terminal-phosphate cyclase (ATP)	1	GGTNAEMAPQIDYTMMVFKPIAEK	GGTNAEMAPQIDYTMMVFKPIAEK	3	GGTNAEMAPQIDYTMMVFKPIAEK3	29567.4	25710.8	24598.8
P47860	P47860;P47858;P30835	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	0	GGTPSAFDR	GGTPSAFDR	2	GGTPSAFDR2	350804	372865	398025
P35171	P35171	CX7A2_RAT	Cox7a2	Cytochrome c oxidase subunit 7A2, mitochondrial	1	GGTSDALLYR	GGTSDALLYR	2	GGTSDALLYR2	31988.1	25291.4	20368.1
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	GGTSEYITSLAYK	GGTSEYITSLAYK	2	GGTSEYITSLAYK2	144305	134315	124929
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	GGTSEYITSLAYK	GGTSEYITSLAYK	3	GGTSEYITSLAYK3	10376.5	9367.85	13972.3
P0DSP1	P0DSP1	SORL_RAT	Sorl1	Sortilin-related receptor	1	GGTWEFLQAPAFTGYGEK	GGTWEFLQAPAFTGYGEK	2	GGTWEFLQAPAFTGYGEK2		2661.13	
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	GGTWFAGFGR	GGTWFAGFGR	2	GGTWFAGFGR2	36703.2	37536.8	46626.6
Q5XIT9	Q5XIT9	MCCB_RAT	Mccc2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	1	GGTYYPVTVK	GGTYYPVTVK	2	GGTYYPVTVK2	21360.1	41088.8	23935
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	GGVAACITHNYK	GGVAAC(UniMod:4)ITHNYK	3	GGVAAC(UniMod:4)ITHNYK3	8631.01	10409.5	10549.9
P81795	C9WPN6;P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	0	GGVAGGSILK	GGVAGGSILK	2	GGVAGGSILK2	347740	349175	340198
A0A8I6AMS6	A0A8I6AMS6	A0A8I6AMS6_RAT	Rangap1	RAN GTPase activating protein 1	1	GGVAMAETLK	GGVAMAETLK	2	GGVAMAETLK2	33473	28276.3	20666.7
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	GGVASGFK	GGVASGFK	1	GGVASGFK1	27436.7	25135.4	17790.9
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	GGVDDEVTLSAYITIALLEMPLPVTHSVVR	GGVDDEVTLSAYITIALLEMPLPVTHSVVR	4	GGVDDEVTLSAYITIALLEMPLPVTHSVVR4	41510.7	3187.78	2079.69
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	GGVFPGPR	GGVFPGPR	2	GGVFPGPR2	14694.4	16149.5	19652.3
Q09137	Q09137	AAPK2_RAT	Prkaa2	5'-AMP-activated protein kinase catalytic subunit alpha-2	1	GGVFYIPEYLNR	GGVFYIPEYLNR	2	GGVFYIPEYLNR2	15430.4	12456.7	18061.1
Q499N5	Q499N5	ACSF2_RAT	Acsf2	Medium-chain acyl-CoA ligase ACSF2, mitochondrial	1	GGVIAGSLAPPELIR	GGVIAGSLAPPELIR	2	GGVIAGSLAPPELIR2	13053.7	12377.5	6634.57
D4A3X1	D4A3X1	D4A3X1_RAT	RGD1308601	RIKEN cDNA 8030462N17 gene	1	GGVIQSVSSWK	GGVIQSVSSWK	2	GGVIQSVSSWK2	13519.7	10787.1	
A0A8I5ZNK2	A0A8I5ZNK2	A0A8I5ZNK2_RAT	Oxsr1	non-specific serine/threonine protein kinase	1	GGVLDESTIATILR	GGVLDESTIATILR	2	GGVLDESTIATILR2	18294.1	26143.9	19308.1
B1WBV0	B1WBV0	CTU1_RAT	Ctu1	Cytoplasmic tRNA 2-thiolation protein 1	1	GGVLGSTGEGCALPR	GGVLGSTGEGC(UniMod:4)ALPR	2	GGVLGSTGEGC(UniMod:4)ALPR2	6429.07	6726.73	8683.59
A0A0G2K069	A0A0G2K069	A0A0G2K069_RAT	Col11a2	Collagen type XI alpha 2 chain	1	GGVLLGPVCFMG	GGVLLGPVC(UniMod:4)FMG	2	GGVLLGPVC(UniMod:4)FMG2	4102.41		5021.9
D4ABL6	D4ABL6	MCTP1_RAT	Mctp1	Multiple C2 and transmembrane domain-containing protein 1	1	GGVMDITAWDKDAGK	GGVMDITAWDKDAGK	3	GGVMDITAWDKDAGK3	2648.65	8019.23	4376.01
Q5EB62	Q5EB62	S2546_RAT	Slc25a46	Mitochondrial outer membrane protein SLC25A46	1	GGVRDDPAFGGPFHAR	GGVRDDPAFGGPFHAR	3	GGVRDDPAFGGPFHAR3	6647.22	5055.64	6863.13
Q5EB62	Q5EB62	S2546_RAT	Slc25a46	Mitochondrial outer membrane protein SLC25A46	1	GGVRDDPAFGGPFHAR	GGVRDDPAFGGPFHAR	4	GGVRDDPAFGGPFHAR4	11363.2	9391.46	6724.79
A0A8I6AQR3	A0A8I6AQR3	A0A8I6AQR3_RAT	Tmem263	Transmembrane protein 263	1	GGVSAVAGGVTAVGSAVVNKVPLSGK	GGVSAVAGGVTAVGSAVVNKVPLSGK	3	GGVSAVAGGVTAVGSAVVNKVPLSGK3	8465.03	12313.4	8435.47
F1M6Q3	F1M6Q3	F1M6Q3_RAT	Col4a2	Collagen type IV alpha 2 chain	1	GGVSAVPGFR	GGVSAVPGFR	2	GGVSAVPGFR2	17516.7	17684.7	
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	GGVSFLNVAR	GGVSFLNVAR	2	GGVSFLNVAR2	36403.8	38174.2	37963
Q5RKH9	Q5RKH9	Q5RKH9_RAT	Derl1	Derlin	1	GGVSGFGVPPASMR	GGVSGFGVPPASMR	2	GGVSGFGVPPASMR2	67948.5	40596	39932.4
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	GGVSIAGHSLGSLILFDILTNQK	GGVSIAGHSLGSLILFDILTNQK	3	GGVSIAGHSLGSLILFDILTNQK3	3350.06		4055.13
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	GGVTEISAADK	GGVTEISAADK	2	GGVTEISAADK2	100467	81156.9	88546.8
A0A0G2JXC5	A0A0G2JXC5	A0A0G2JXC5_RAT	Mrtfa	Myocardin related transcription factor A	1	GGVTITK	GGVTITK	1	GGVTITK1	6124.85	6030.21	9324.21
P05065	Q6AY07;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	GGVVGIK	GGVVGIK	1	GGVVGIK1	12326	13047	12449.7
P47824	P47824	P2RX1_RAT	P2rx1	P2X purinoceptor 1	1	GGVVGITIDWK	GGVVGITIDWK	2	GGVVGITIDWK2	133164	103320	75298.2
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	GGVVTEVK	GGVVTEVK	2	GGVVTEVK2	82759.5	113802	85949
Q4QQV2	Q4QQV2	DOK1_RAT	Dok1	Docking protein 1	1	GGWALAQTENPPK	GGWALAQTENPPK	2	GGWALAQTENPPK2	95669.9	93353.7	83375.9
A0A8I6B124	A0A8I6B124	A0A8I6B124_RAT	Zswim8	Zinc finger, SWIM-type containing 8	1	GGWAPASWGR	GGWAPASWGR	2	GGWAPASWGR2	10295.7	8695.27	11075
P62716	A0A0G2JYA4;P63331;P62716	PP2AB_RAT	Ppp2cb	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	0	GGWGISPR	GGWGISPR	2	GGWGISPR2	327293	340295	337091
D3ZIK0	D3ZIK0	D3ZIK0_RAT	Glce	heparosan-N-sulfate-glucuronate 5-epimerase	1	GGWPIMVTR	GGWPIMVTR	2	GGWPIMVTR2	13965.9	21308.2	14885.6
Q6AYH9	Q6AYH9	DAAF1_RAT	Dnaaf1	Dynein axonemal assembly factor 1	1	GGYAAEK	GGYAAEK	1	GGYAAEK1			358951
P48032	P48032	TIMP3_RAT	Timp3	Metalloproteinase inhibitor 3	1	GGYCSWYR	GGYC(UniMod:4)SWYR	2	GGYC(UniMod:4)SWYR2	1.32269e+06	1.43243e+06	1.39125e+06
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	GGYFDEFGIIR	GGYFDEFGIIR	2	GGYFDEFGIIR2	26868.3	14115.4	17090.7
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	GGYFPENVK	GGYFPENVK	2	GGYFPENVK2	491409	559703	550968
A1L1K4	A1L1K4	C42S2_RAT	Cdc42se2	CDC42 small effector protein 2	1	GGYGGGMPANVQMQLVDTK	GGYGGGMPANVQMQLVDTK	2	GGYGGGMPANVQMQLVDTK2		10109.3	5589.68
A0A8I5ZYZ8	A0A8I5ZYZ8	A0A8I5ZYZ8_RAT	Ube2m	Ubiquitin-conjugating enzyme E2M	1	GGYIGSTYFER	GGYIGSTYFER	2	GGYIGSTYFER2	57335.8	49025.9	55551.1
Q63448	Q63448	ACOX3_RAT	Acox3	Peroxisomal acyl-coenzyme A oxidase 3	1	GGYISGEQTGK	GGYISGEQTGK	2	GGYISGEQTGK2	42461.8	24710.9	29337.5
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	GGYTCVCPDGFLLDSSR	GGYTC(UniMod:4)VC(UniMod:4)PDGFLLDSSR	2	GGYTC(UniMod:4)VC(UniMod:4)PDGFLLDSSR2	44044	66782.2	48683.3
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	GGYTCVCPDGFLLDSSR	GGYTC(UniMod:4)VC(UniMod:4)PDGFLLDSSR	3	GGYTC(UniMod:4)VC(UniMod:4)PDGFLLDSSR3	21576.2	18277.6	17447.7
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	GGYVLHIGTIYGNLR	GGYVLHIGTIYGNLR	3	GGYVLHIGTIYGNLR3	25916.6	15717.4	10841.9
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	GHAADVFEAYTQLLTEMVLR	GHAADVFEAYTQLLTEMVLR	3	GHAADVFEAYTQLLTEMVLR3		7469.56	3783.86
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	GHAAPILYAVWAEAGFLPEAELLNLR	GHAAPILYAVWAEAGFLPEAELLNLR	3	GHAAPILYAVWAEAGFLPEAELLNLR3	1386.94		
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	GHAAPILYAVWAEAGFLPEAELLNLRK	GHAAPILYAVWAEAGFLPEAELLNLRK	4	GHAAPILYAVWAEAGFLPEAELLNLRK4	2416.45	4279.01	2360.6
Q9JL55	Q9JL55	GDE1_RAT	Gde1	Glycerophosphodiester phosphodiesterase 1	1	GHADMASAALK	GHADMASAALK	2	GHADMASAALK2	22291.8	17816.9	18533.6
D3ZWS0	D3ZWS0	D3ZWS0_RAT	Scrib	Scribble planar cell polarity protein	1	GHAGNPCDPTDEGIFISK	GHAGNPC(UniMod:4)DPTDEGIFISK	3	GHAGNPC(UniMod:4)DPTDEGIFISK3	5917.49	9832.04	5419.38
A9CMA6	A9CMA6	TM163_RAT	Tmem163	Transmembrane protein 163	1	GHAPSTAAPAPNPAPLSSSMQPDEER	GHAPSTAAPAPNPAPLSSSMQPDEER	3	GHAPSTAAPAPNPAPLSSSMQPDEER3	5568.91	5357.4	4922.59
A9CMA6	A9CMA6	TM163_RAT	Tmem163	Transmembrane protein 163	1	GHAPSTAAPAPNPAPLSSSMQPDEERQPR	GHAPSTAAPAPNPAPLSSSMQPDEERQPR	4	GHAPSTAAPAPNPAPLSSSMQPDEERQPR4	56071.6	74263.9	42647.6
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	GHAQMYQQK	GHAQMYQQK	2	GHAQMYQQK2			81702.7
Q6MG56	Q6MG56	LY66F_RAT	Ly6g6f	Lymphocyte antigen 6 complex locus protein G6f	1	GHAQYFWGEGAALLLVCPTEGVPETR	GHAQYFWGEGAALLLVC(UniMod:4)PTEGVPETR	3	GHAQYFWGEGAALLLVC(UniMod:4)PTEGVPETR3	406131	395794	420699
Q6MG56	Q6MG56	LY66F_RAT	Ly6g6f	Lymphocyte antigen 6 complex locus protein G6f	1	GHAQYFWGEGAALLLVCPTEGVPETR	GHAQYFWGEGAALLLVC(UniMod:4)PTEGVPETR	4	GHAQYFWGEGAALLLVC(UniMod:4)PTEGVPETR4	11403.5	9535.31	17763.2
A0A8I5ZZ05	A0A8I5ZZ05	A0A8I5ZZ05_RAT	Soga1	Suppressor of glucose, autophagy associated 1	1	GHASQMELK	GHASQMELK	2	GHASQMELK2	22969.8	17727.2	
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	GHATDEWFLLSSHIPLK	GHATDEWFLLSSHIPLK	3	GHATDEWFLLSSHIPLK3	11775.1	20231.7	20157.4
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	GHATDEWFLLSSHIPLK	GHATDEWFLLSSHIPLK	4	GHATDEWFLLSSHIPLK4	7367.47	6801.06	5287.17
P62268	F1LTW8;D4A9Q3;P62268	RS23_RAT	Rps23	Small ribosomal subunit protein uS12	0	GHAVGDIPGVR	GHAVGDIPGVR	2	GHAVGDIPGVR2	9670.47	5104	7442.26
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	GHAVNLLDVPVPVAR	GHAVNLLDVPVPVAR	2	GHAVNLLDVPVPVAR2	10462.8	13125.3	16774.6
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	GHAVNLLDVPVPVAR	GHAVNLLDVPVPVAR	3	GHAVNLLDVPVPVAR3	145865	127720	133955
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	GHAVSYPASVR	GHAVSYPASVR	2	GHAVSYPASVR2	5220.03	9916.54	6816.87
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	GHAVSYPASVR	GHAVSYPASVR	3	GHAVSYPASVR3	27141.2	30267.6	35964.1
F1LP44	F1LP44	F1LP44_RAT	Itgal	Integrin subunit alpha L	1	GHAVVGAVGAK	GHAVVGAVGAK	2	GHAVVGAVGAK2	4014.29		3064.59
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	GHAYAVTDVR	GHAYAVTDVR	2	GHAYAVTDVR2	79231.2	87087.3	43092.6
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	GHAYAVTDVRK	GHAYAVTDVRK	3	GHAYAVTDVRK3	14629.9	28375.1	23695
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	GHAYSVTGAEEVESSGSLQK	GHAYSVTGAEEVESSGSLQK	3	GHAYSVTGAEEVESSGSLQK3	603940	747229	747314
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	GHDDLGDHYLDCGDLSNALK	GHDDLGDHYLDC(UniMod:4)GDLSNALK	3	GHDDLGDHYLDC(UniMod:4)GDLSNALK3	16107.1	10188.4	13094.8
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	GHDDLGDHYLDCGDLSNALK	GHDDLGDHYLDC(UniMod:4)GDLSNALK	4	GHDDLGDHYLDC(UniMod:4)GDLSNALK4	18663.5	14369.5	20721.9
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	GHDGDLISHYR	GHDGDLISHYR	3	GHDGDLISHYR3	8876.71	17628.7	13792.7
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	GHDGTPESDCFAFTESHYNAELFR	GHDGTPESDC(UniMod:4)FAFTESHYNAELFR	3	GHDGTPESDC(UniMod:4)FAFTESHYNAELFR3	6168.25	5118.91	2278.11
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	GHDGTPESDCFAFTESHYNAELFR	GHDGTPESDC(UniMod:4)FAFTESHYNAELFR	4	GHDGTPESDC(UniMod:4)FAFTESHYNAELFR4	37338.7	55533.2	42369.3
D3ZZJ7	D3ZZJ7	D3ZZJ7_RAT	Dcp1b	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	GHDISLAALR	GHDISLAALR	2	GHDISLAALR2	3720.18		4433.59
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	GHDRLDLPVTVR	GHDRLDLPVTVR	3	GHDRLDLPVTVR3	110733	138622	86443.1
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	GHEDDVFSSHLGEPNASK	GHEDDVFSSHLGEPNASK	3	GHEDDVFSSHLGEPNASK3	28069.1	31457	25377.7
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	GHEDDVFSSHLGEPNASK	GHEDDVFSSHLGEPNASK	4	GHEDDVFSSHLGEPNASK4	138476	134008	137627
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	GHEFIPTLYHFPTNCEACMK	GHEFIPTLYHFPTNC(UniMod:4)EAC(UniMod:4)MK	3	GHEFIPTLYHFPTNC(UniMod:4)EAC(UniMod:4)MK3	10052.1	7729.66	6093.22
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	GHEFIPTLYHFPTNCEACMK	GHEFIPTLYHFPTNC(UniMod:4)EAC(UniMod:4)MK	4	GHEFIPTLYHFPTNC(UniMod:4)EAC(UniMod:4)MK4	23635.2	15756.3	17455.8
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GHEFLSHPFAVTLYGGEVYWTDWR	GHEFLSHPFAVTLYGGEVYWTDWR	4	GHEFLSHPFAVTLYGGEVYWTDWR4	58407.2	37302	37877.2
B2RZ33	B2RZ33	B2RZ33_RAT	Nck1	Cytoplasmic protein	1	GHEGDFLIR	GHEGDFLIR	2	GHEGDFLIR2	7070.06	2603.68	
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	GHEGPVCCCSFSPDGR	GHEGPVC(UniMod:4)C(UniMod:4)C(UniMod:4)SFSPDGR	3	GHEGPVC(UniMod:4)C(UniMod:4)C(UniMod:4)SFSPDGR3	4146.55	7235.82	5290.78
Q5XFW8	Q5XFW8	SEC13_RAT	Sec13	Protein SEC13 homolog	1	GHEGPVWQVAWAHPMYGNILASCSYDR	GHEGPVWQVAWAHPMYGNILASC(UniMod:4)SYDR	4	GHEGPVWQVAWAHPMYGNILASC(UniMod:4)SYDR4	36939.5	31526.7	23344.9
Q5XFW8	Q5XFW8	SEC13_RAT	Sec13	Protein SEC13 homolog	1	GHEGPVWQVAWAHPMYGNILASCSYDRK	GHEGPVWQVAWAHPMYGNILASC(UniMod:4)SYDRK	4	GHEGPVWQVAWAHPMYGNILASC(UniMod:4)SYDRK4	5790.26	4709.52	3712.29
A0A0G2K3L8	A0A0G2K3L8	A0A0G2K3L8_RAT	Wdfy1	WD repeat and FYVE domain containing 1	1	GHEGSIACLWWDPIQR	GHEGSIAC(UniMod:4)LWWDPIQR	3	GHEGSIAC(UniMod:4)LWWDPIQR3	3003.3	1865.4	7704.7
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	GHELEFCLYGK	GHELEFC(UniMod:4)LYGK	2	GHELEFC(UniMod:4)LYGK2	19300.2	22568.7	27013.2
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	GHELEFCLYGK	GHELEFC(UniMod:4)LYGK	3	GHELEFC(UniMod:4)LYGK3	40785.5	28009.4	16676
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	GHELVPLEQER	GHELVPLEQER	2	GHELVPLEQER2	13278.8	7207.98	4224.57
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	GHELVPLEQER	GHELVPLEQER	3	GHELVPLEQER3	25738.7	27591.2	28948.7
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	GHEMTSIGLLLGVSAAK	GHEMTSIGLLLGVSAAK	3	GHEMTSIGLLLGVSAAK3	3056.32		4604.54
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	GHETSALLILEK	GHETSALLILEK	3	GHETSALLILEK3	3098.67	10043.7	7827.02
P08541	P08541	UD2B2_RAT	Ugt2b	UDP-glucuronosyltransferase 2B2	1	GHEVTVLKPSAYFFLDPK	GHEVTVLKPSAYFFLDPK	4	GHEVTVLKPSAYFFLDPK4	8557.59	8237.01	5310.82
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	GHEYSIQFAEMK	GHEYSIQFAEMK	2	GHEYSIQFAEMK2	96679.3	97101.5	95743.1
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	GHEYSIQFAEMK	GHEYSIQFAEMK	3	GHEYSIQFAEMK3	444621	511793	540058
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	GHEYTNIK	GHEYTNIK	2	GHEYTNIK2	123537	91677.6	113136
Q3B7D1	Q3B7D1	UBE2Z_RAT	Ube2z	Ubiquitin-conjugating enzyme E2 Z	1	GHFDYQSLLMR	GHFDYQSLLMR	2	GHFDYQSLLMR2	20896.3	23101.1	18825.6
Q3B7D1	Q3B7D1	UBE2Z_RAT	Ube2z	Ubiquitin-conjugating enzyme E2 Z	1	GHFDYQSLLMR	GHFDYQSLLMR	3	GHFDYQSLLMR3	25768.7	28809.2	28989.5
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	GHFFVGDQIYCEK	GHFFVGDQIYC(UniMod:4)EK	2	GHFFVGDQIYC(UniMod:4)EK2	65160.3	55478.5	66607.7
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	GHFFVGDQIYCEK	GHFFVGDQIYC(UniMod:4)EK	3	GHFFVGDQIYC(UniMod:4)EK3	669163	664487	688928
D4A447	D4A447	D4A447_RAT	Cd109	CD109 molecule	1	GHFGILVLPALPLHK	GHFGILVLPALPLHK	4	GHFGILVLPALPLHK4	5369.16	1187.49	3109.68
Q5XIG8	Q5XIG8	STRAP_RAT	Strap	Serine-threonine kinase receptor-associated protein	1	GHFGPIHCVR	GHFGPIHC(UniMod:4)VR	2	GHFGPIHC(UniMod:4)VR2	2852.77		
Q5XIG8	Q5XIG8	STRAP_RAT	Strap	Serine-threonine kinase receptor-associated protein	1	GHFGPIHCVR	GHFGPIHC(UniMod:4)VR	3	GHFGPIHC(UniMod:4)VR3	56294.6	77635.2	36521.9
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	GHFGPINSVAFHPDGK	GHFGPINSVAFHPDGK	2	GHFGPINSVAFHPDGK2	6949.74	1354.39	
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	GHFGPINSVAFHPDGK	GHFGPINSVAFHPDGK	3	GHFGPINSVAFHPDGK3	174704	101567	112636
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	GHFGPINSVAFHPDGK	GHFGPINSVAFHPDGK	4	GHFGPINSVAFHPDGK4	90130.1	59716.5	63126.4
Q66H15	Q66H15	RMD3_RAT	Rmdn3	Regulator of microtubule dynamics protein 3	1	GHFLLGR	GHFLLGR	2	GHFLLGR2	15214.7	18123.5	16527.7
Q5HZX7	Q5HZX7	LDAH_RAT	Ldah	Lipid droplet-associated hydrolase	1	GHFPVWIISHAGFCLTPK	GHFPVWIISHAGFC(UniMod:4)LTPK	3	GHFPVWIISHAGFC(UniMod:4)LTPK3	5038.27		
Q5HZX7	Q5HZX7	LDAH_RAT	Ldah	Lipid droplet-associated hydrolase	1	GHFPVWIISHAGFCLTPK	GHFPVWIISHAGFC(UniMod:4)LTPK	4	GHFPVWIISHAGFC(UniMod:4)LTPK4	3698.24	2158.78	
O88350	O88350	RBBP9_RAT	Rbbp9	Serine hydrolase RBBP9	1	GHFQNTEFHELIR	GHFQNTEFHELIR	3	GHFQNTEFHELIR3	1485.22	1058.23	3715.58
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	GHFTSLELVPPSTLTTTHLK	GHFTSLELVPPSTLTTTHLK	3	GHFTSLELVPPSTLTTTHLK3	63414.3	48975.4	62952.4
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	GHFTSLELVPPSTLTTTHLK	GHFTSLELVPPSTLTTTHLK	4	GHFTSLELVPPSTLTTTHLK4	58509.4	54495.2	67291
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	GHFVTQVAMGK	GHFVTQVAMGK	2	GHFVTQVAMGK2	11967.4	10452.2	13624.6
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	GHFYVFDVLDQDGNIVNPLEIQAHLK	GHFYVFDVLDQDGNIVNPLEIQAHLK	4	GHFYVFDVLDQDGNIVNPLEIQAHLK4	8125.66	1314.82	7196.66
A0A8I5ZU41	A0A8I5ZU41	A0A8I5ZU41_RAT	Amy1	Alpha-amylase	1	GHGAGGSSILTFWDAR	GHGAGGSSILTFWDAR	3	GHGAGGSSILTFWDAR3	4217.63	2570.4	3803.14
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	GHGALNDLTFTEEVDMK	GHGALNDLTFTEEVDMK	2	GHGALNDLTFTEEVDMK2	179250	2.90018e+06	2.72567e+06
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	GHGALNDLTFTEEVDMK	GHGALNDLTFTEEVDMK	3	GHGALNDLTFTEEVDMK3	52468.5	55293.2	42539.4
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	GHGALNDLTFTEEVDMK	GHGALNDLTFTEEVDMK	4	GHGALNDLTFTEEVDMK4	8123.85	6152.95	8518.59
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	GHGALNDLTFTEEVDMKEMDAALK	GHGALNDLTFTEEVDMKEMDAALK	3	GHGALNDLTFTEEVDMKEMDAALK3	1.0566e+06	950141	1.01278e+06
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	GHGALNDLTFTEEVDMKEMDAALK	GHGALNDLTFTEEVDMKEMDAALK	4	GHGALNDLTFTEEVDMKEMDAALK4	360341	378152	243111
A0A8I6AGS4	A0A8I6AGS4	A0A8I6AGS4_RAT	Abi3bp	ABI family member 3 binding protein	1	GHGEDHCQFVDSFLDGR	GHGEDHC(UniMod:4)QFVDSFLDGR	3	GHGEDHC(UniMod:4)QFVDSFLDGR3	5362.62	9479.77	3621.18
A0A8I6AGS4	A0A8I6AGS4	A0A8I6AGS4_RAT	Abi3bp	ABI family member 3 binding protein	1	GHGEDHCQFVDSFLDGR	GHGEDHC(UniMod:4)QFVDSFLDGR	4	GHGEDHC(UniMod:4)QFVDSFLDGR4	12755.8	14770.6	10446.1
D3ZUV2	D3ZUV2	D3ZUV2_RAT	Mib1	RING-type E3 ubiquitin transferase	1	GHGEWAEAMLPTLGK	GHGEWAEAMLPTLGK	3	GHGEWAEAMLPTLGK3	6685.24	3991.64	9616.43
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	GHGSWSGPPPQCLQSSPLTHCPDPEVK	GHGSWSGPPPQC(UniMod:4)LQSSPLTHC(UniMod:4)PDPEVK	4	GHGSWSGPPPQC(UniMod:4)LQSSPLTHC(UniMod:4)PDPEVK4	58965.8	51456.9	57142.8
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	GHGVSEFSFAYQDPK	GHGVSEFSFAYQDPK	3	GHGVSEFSFAYQDPK3	11874.7	9673.81	2935.41
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	GHHCLNSPGSFR	GHHC(UniMod:4)LNSPGSFR	2	GHHC(UniMod:4)LNSPGSFR2	9430.5	10292	9140.87
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	GHHCLNSPGSFR	GHHC(UniMod:4)LNSPGSFR	3	GHHC(UniMod:4)LNSPGSFR3	461200	576627	385026
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	GHIASVLNAWPEDVVK	GHIASVLNAWPEDVVK	2	GHIASVLNAWPEDVVK2	8317.39	6116.9	6824.63
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	GHIASVLNAWPEDVVK	GHIASVLNAWPEDVVK	3	GHIASVLNAWPEDVVK3	65685	56091.2	65528.1
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	GHIAVSAAVFPTGTK	GHIAVSAAVFPTGTK	3	GHIAVSAAVFPTGTK3	51328.7	39247.2	52795.5
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	GHIFVQTDQPIYNPGQR	GHIFVQTDQPIYNPGQR	3	GHIFVQTDQPIYNPGQR3	3.61429e+07	3.68627e+07	3.81084e+07
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	GHIFVQTDQPIYNPGQR	GHIFVQTDQPIYNPGQR	4	GHIFVQTDQPIYNPGQR4	80938.7	91938.2	88878.5
P70619	P70619	GSHR_RAT	Gsr	Glutathione reductase (Fragment)	1	GHILVDEFQNTNVK	GHILVDEFQNTNVK	2	GHILVDEFQNTNVK2	8347.12	6304.75	7703.76
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	GHIQLSYSDGDDCGNDK	GHIQLSYSDGDDC(UniMod:4)GNDK	3	GHIQLSYSDGDDC(UniMod:4)GNDK3	2942.29	5226.16	3160.1
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	GHISEGEIQK	GHISEGEIQK	2	GHISEGEIQK2	27535.7	27112.8	19737.6
Q5RJY4	Q5RJY4	DRS7B_RAT	Dhrs7b	Dehydrogenase/reductase SDR family member 7B	1	GHIVAISSIQGK	GHIVAISSIQGK	3	GHIVAISSIQGK3	3770.33	6795.04	4424.26
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	GHIYNSTSR	GHIYNSTSR	2	GHIYNSTSR2			11981.3
Q5U2Y0	Q5U2Y0	WIPI4_RAT	Wdr45	WD repeat domain phosphoinositide-interacting protein 4	1	GHLDHEQVGSVGLVEMLHR	GHLDHEQVGSVGLVEMLHR	4	GHLDHEQVGSVGLVEMLHR4	24378.1	20397.7	24248.2
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	GHLDNISNNLLIGAINIENGK	GHLDNISNNLLIGAINIENGK	3	GHLDNISNNLLIGAINIENGK3	46341.3	46747.2	44141.2
P19945	P19945	RLA0_RAT	Rplp0	Large ribosomal subunit protein uL10	1	GHLENNPALEK	GHLENNPALEK	2	GHLENNPALEK2	34698	33858.7	28052.6
P19945	P19945	RLA0_RAT	Rplp0	Large ribosomal subunit protein uL10	1	GHLENNPALEK	GHLENNPALEK	3	GHLENNPALEK3	102272	111689	91672.5
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	GHLETPVWIER	GHLETPVWIER	2	GHLETPVWIER2	206512	247269	206854
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	GHLETPVWIER	GHLETPVWIER	3	GHLETPVWIER3	975615	1.0446e+06	973626
D4A731	D4A731	D4A731_RAT	Ankib1	RBR-type E3 ubiquitin transferase	1	GHLFCWECLGEAHEPCDCQTWK	GHLFC(UniMod:4)WEC(UniMod:4)LGEAHEPC(UniMod:4)DC(UniMod:4)QTWK	4	GHLFC(UniMod:4)WEC(UniMod:4)LGEAHEPC(UniMod:4)DC(UniMod:4)QTWK4	3882.97	4226.23	
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	GHLIAWANNMGVK	GHLIAWANNMGVK	3	GHLIAWANNMGVK3		3580.66	7340.06
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	GHLLDSFAR	GHLLDSFAR	2	GHLLDSFAR2	28033.6	26690.8	22828.9
A0A8I5ZLY7	A0A8I5ZLY7	A0A8I5ZLY7_RAT	Tapbp	TAP binding protein	1	GHLLLAAIPGLLEK	GHLLLAAIPGLLEK	2	GHLLLAAIPGLLEK2	46640	51299.4	50627.6
A0A8I5ZLY7	A0A8I5ZLY7	A0A8I5ZLY7_RAT	Tapbp	TAP binding protein	1	GHLLLAAIPGLLEK	GHLLLAAIPGLLEK	3	GHLLLAAIPGLLEK3	31551.5	16703.8	27839.1
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	GHLLLLR	GHLLLLR	2	GHLLLLR2	157499	110416	131092
D4AB17	D4AB17	D4AB17_RAT	Pfas	phosphoribosylformylglycinamidine synthase	1	GHLLYVPLSPGQHR	GHLLYVPLSPGQHR	3	GHLLYVPLSPGQHR3	4866.3		4400.92
E9PU42	E9PU42	E9PU42_RAT	Vps26c	VPS26 endosomal protein sorting factor C	1	GHLNSTNCAITQPLTGELVVEHSDAAIR	GHLNSTNC(UniMod:4)AITQPLTGELVVEHSDAAIR	4	GHLNSTNC(UniMod:4)AITQPLTGELVVEHSDAAIR4	2000.18		3134.35
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	GHLQQVLSGLR	GHLQQVLSGLR	2	GHLQQVLSGLR2	8496.22	4789.56	4966.81
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	GHLQQVLSGLR	GHLQQVLSGLR	3	GHLQQVLSGLR3	97403.8	71291.7	69876.5
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	GHLQQVLSGLRR	GHLQQVLSGLRR	3	GHLQQVLSGLRR3	19554.3	10570.7	17447.6
P30427	P30427	PLEC_RAT	Plec	Plectin	1	GHLSGLAK	GHLSGLAK	2	GHLSGLAK2		5558.94	
F7F888	F7F888	F7F888_RAT	Mta2	Metastasis associated 1 family, member 2	1	GHLSRPEAQSLSPYTTSANR	GHLSRPEAQSLSPYTTSANR	3	GHLSRPEAQSLSPYTTSANR3	4724.66		
F7EKI5	F7EKI5	F7EKI5_RAT	Pcdh18	Protocadherin 18	1	GHLTLFKPVDYEITK	GHLTLFKPVDYEITK	2	GHLTLFKPVDYEITK2	2799.8		3592.7
F7EKI5	F7EKI5	F7EKI5_RAT	Pcdh18	Protocadherin 18	1	GHLTLFKPVDYEITK	GHLTLFKPVDYEITK	3	GHLTLFKPVDYEITK3	12693	11393.6	11516.4
F7EKI5	F7EKI5	F7EKI5_RAT	Pcdh18	Protocadherin 18	1	GHLTLFKPVDYEITK	GHLTLFKPVDYEITK	4	GHLTLFKPVDYEITK4	9593.12	10938.1	9548.6
A0A0G2JYA7	A0A0G2JYA7	A0A0G2JYA7_RAT	Tarbp1	TAR (HIV-1) RNA binding protein 1	1	GHLVPLLYVSQGGGPASPR	GHLVPLLYVSQGGGPASPR	3	GHLVPLLYVSQGGGPASPR3	1579.18		4327.23
D3ZE05	D3ZE05	D3ZE05_RAT	Cilp2	Cartilage intermediate layer protein 2	1	GHLYGLR	GHLYGLR	2	GHLYGLR2	22965.1	25504.9	16260.7
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	GHMDDLNSENAK	GHMDDLNSENAK	2	GHMDDLNSENAK2	8637.47	11567.1	2526.56
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	GHMDDLNSENAK	GHMDDLNSENAK	3	GHMDDLNSENAK3	13599.9	21255.9	13755.9
Q641Y2	Q641Y2	NDUS2_RAT	Ndufs2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	1	GHMLADVVAIIGTQDIVFGEIDR	GHMLADVVAIIGTQDIVFGEIDR	3	GHMLADVVAIIGTQDIVFGEIDR3	1334.1	4715.3	5837.01
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	GHMLENHVER	GHMLENHVER	2	GHMLENHVER2	1.26343e+07	1.39745e+07	1.14157e+07
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	GHMLENHVER	GHMLENHVER	3	GHMLENHVER3	1.01854e+06	49522.6	2.5821e+06
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	GHMLENHVERLWAYLTIQELLAK	GHMLENHVERLWAYLTIQELLAK	3	GHMLENHVERLWAYLTIQELLAK3	46102.7	46113.8	32715.6
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	GHMLENHVERLWAYLTIQELLAK	GHMLENHVERLWAYLTIQELLAK	4	GHMLENHVERLWAYLTIQELLAK4	173376	198026	408609
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	GHMLENHVERLWAYLTIQELLAKR	GHMLENHVERLWAYLTIQELLAKR	3	GHMLENHVERLWAYLTIQELLAKR3	19394.7	6098.6	
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	GHMLENHVERLWAYLTIQELLAKR	GHMLENHVERLWAYLTIQELLAKR	4	GHMLENHVERLWAYLTIQELLAKR4	30095.4	61249.4	31583.5
P14882	P14882	PCCA_RAT	Pcca	Propionyl-CoA carboxylase alpha chain, mitochondrial	1	GHMLTPSERDQLLAIASSLFVASQLR	GHMLTPSERDQLLAIASSLFVASQLR	4	GHMLTPSERDQLLAIASSLFVASQLR4	7475.81		
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	GHMNYEGPGMAR	GHMNYEGPGMAR	2	GHMNYEGPGMAR2	1432.49	1689.94	
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	GHMNYEGPGMAR	GHMNYEGPGMAR	3	GHMNYEGPGMAR3	16010.2	18953.8	16023.4
Q3ZBA0	Q3ZBA0	TCPR1_RAT	Tecpr1	Tectonin beta-propeller repeat-containing protein 1	1	GHNIALWAVSDK	GHNIALWAVSDK	3	GHNIALWAVSDK3		2786.24	
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	GHNPLPSPWR	GHNPLPSPWR	2	GHNPLPSPWR2	10716.5		17983.3
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	GHNPLPSPWR	GHNPLPSPWR	3	GHNPLPSPWR3	43153.7	45419.9	43100.1
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	GHNQPCLLVGTGR	GHNQPC(UniMod:4)LLVGTGR	3	GHNQPC(UniMod:4)LLVGTGR3	17668.6	21468.5	11932.6
D4A6K4	D4A6K4	D4A6K4_RAT	Golga1	Golgin A1	1	GHNSALLQMHQLQR	GHNSALLQMHQLQR	4	GHNSALLQMHQLQR4		1832.87	
D4A7J8	D4A7J8	D4A7J8_RAT	Prpf4	Pre-mRNA processing factor 4	1	GHNTNVGAIVFHPK	GHNTNVGAIVFHPK	3	GHNTNVGAIVFHPK3	12141.1	2800.75	
Q62902	Q62902	LMAN1_RAT	Lman1	Protein ERGIC-53	1	GHPDLQGQPADDIFESIGDR	GHPDLQGQPADDIFESIGDR	3	GHPDLQGQPADDIFESIGDR3	43402.5	39388.1	24853.9
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	GHPDVATMLNILALVYR	GHPDVATMLNILALVYR	3	GHPDVATMLNILALVYR3	5803.03	3759.26	4624.07
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	GHPEFSTNR	GHPEFSTNR	2	GHPEFSTNR2	306785	293917	255547
A4GW50	A4GW50	A4GW50_RAT	Stk38l	Serine/threonine kinase 38 like	1	GHPFFEGVDWGHIR	GHPFFEGVDWGHIR	3	GHPFFEGVDWGHIR3	4125.5	3164.93	5127.84
A4GW50	A4GW50	A4GW50_RAT	Stk38l	Serine/threonine kinase 38 like	1	GHPFFEGVDWGHIR	GHPFFEGVDWGHIR	4	GHPFFEGVDWGHIR4	2178.63	3614.1	3299.89
M0R3L8	M0R3L8	M0R3L8_RAT	Gba	Glucosylceramidase	1	GHPGDIYHEAWANYFVK	GHPGDIYHEAWANYFVK	3	GHPGDIYHEAWANYFVK3	35232.9	20234	31637.3
M0R3L8	M0R3L8	M0R3L8_RAT	Gba	Glucosylceramidase	1	GHPGDIYHEAWANYFVK	GHPGDIYHEAWANYFVK	4	GHPGDIYHEAWANYFVK4	5983	8060.6	10154.4
A0A0G2K6R0	A0A0G2K6R0	A0A0G2K6R0_RAT	Tnrc6b	Trinucleotide repeat containing adaptor 6B	1	GHPLPENQGNAQAPCWGR	GHPLPENQGNAQAPC(UniMod:4)WGR	3	GHPLPENQGNAQAPC(UniMod:4)WGR3	5139.79	3617.17	4758.79
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	GHPPLEFSDCYLDSPDFR	GHPPLEFSDC(UniMod:4)YLDSPDFR	3	GHPPLEFSDC(UniMod:4)YLDSPDFR3	56425.6	42673.9	52433.7
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	GHPQQDYLMMDDYAK	GHPQQDYLMMDDYAK	3	GHPQQDYLMMDDYAK3	1802.07		
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	GHPTPLR	GHPTPLR	2	GHPTPLR2	282817	271733	272046
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	GHQFSCVCLHGDR	GHQFSC(UniMod:4)VC(UniMod:4)LHGDR	2	GHQFSC(UniMod:4)VC(UniMod:4)LHGDR2	1462.38		
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	GHQFSCVCLHGDR	GHQFSC(UniMod:4)VC(UniMod:4)LHGDR	3	GHQFSC(UniMod:4)VC(UniMod:4)LHGDR3	18205.4	5758.42	
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	GHQFSCVCLHGDR	GHQFSC(UniMod:4)VC(UniMod:4)LHGDR	4	GHQFSC(UniMod:4)VC(UniMod:4)LHGDR4	31387.2	8339.06	9728.76
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	GHQGFGVLSVILANHAIK	GHQGFGVLSVILANHAIK	3	GHQGFGVLSVILANHAIK3	5099.52	8217.49	5548.03
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	GHQGFGVLSVILANHAIK	GHQGFGVLSVILANHAIK	4	GHQGFGVLSVILANHAIK4	12620.3	8119.77	12264.6
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	GHQLLSADVDIK	GHQLLSADVDIK	2	GHQLLSADVDIK2	3220.85		
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	GHQLLSADVDIK	GHQLLSADVDIK	3	GHQLLSADVDIK3	25231.8	16341.5	18142.2
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	GHQLLTQEHVLR	GHQLLTQEHVLR	3	GHQLLTQEHVLR3	1509.52	7040.76	7564.44
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	GHQLQLDYFGACK	GHQLQLDYFGAC(UniMod:4)K	2	GHQLQLDYFGAC(UniMod:4)K2	56161.7	56941.6	58922.3
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	GHQLQLDYFGACK	GHQLQLDYFGAC(UniMod:4)K	3	GHQLQLDYFGAC(UniMod:4)K3	577056	691456	593014
Q920L7	Q920L7	ELOV5_RAT	Elovl5	Elongation of very long chain fatty acids protein 5	1	GHQNGSMTAVNGHTNNFASLENSVTSR	GHQNGSMTAVNGHTNNFASLENSVTSR	4	GHQNGSMTAVNGHTNNFASLENSVTSR4	2687.13	5744.49	4348.25
P62275	A0A8L2ULK7;P62275	RS29_RAT	Rps29	Small ribosomal subunit protein uS14	0	GHQQLYWSHPR	GHQQLYWSHPR	3	GHQQLYWSHPR3	14606.5		
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	GHRPVDRR	GHRPVDRR	2	GHRPVDRR2			29338.4
A0A8I6ASF5	A0A8I6ASF5	A0A8I6ASF5_RAT	Rpl4-ps1	Similar to 60S ribosomal protein L4 (L1)	1	GHRVEEVPELPLVVEDK	GHRVEEVPELPLVVEDK	4	GHRVEEVPELPLVVEDK4	5214.87	6068.99	12276
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	GHSADSCMNFQCK	GHSADSC(UniMod:4)MNFQC(UniMod:4)K	2	GHSADSC(UniMod:4)MNFQC(UniMod:4)K2	79303.1	108535	87866.1
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	GHSADSCMNFQCK	GHSADSC(UniMod:4)MNFQC(UniMod:4)K	3	GHSADSC(UniMod:4)MNFQC(UniMod:4)K3	453259	437375	433200
A0A096MJF9	A0A096MJF9	A0A096MJF9_RAT	Tmem132e	Transmembrane protein 132E	1	GHSALPDLER	GHSALPDLER	2	GHSALPDLER2	1367.55	4620.99	
M0RCS2	M0RCS2	M0RCS2_RAT	Tbl2	Transducin (beta)-like 2	1	GHSASVHSFAFSNDSR	GHSASVHSFAFSNDSR	3	GHSASVHSFAFSNDSR3	6683.1	5780.21	2959.55
M0RCS2	M0RCS2	M0RCS2_RAT	Tbl2	Transducin (beta)-like 2	1	GHSASVHSFAFSNDSR	GHSASVHSFAFSNDSR	4	GHSASVHSFAFSNDSR4	5971.72	5543.16	7898.39
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	GHSEVVAILQSPGDWMCPVNK	GHSEVVAILQSPGDWMC(UniMod:4)PVNK	3	GHSEVVAILQSPGDWMC(UniMod:4)PVNK3	6303.36	17467.6	8328.32
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	GHSFLAFPTLR	GHSFLAFPTLR	2	GHSFLAFPTLR2	2478.72	6337.53	4136.23
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	GHSFLAFPTLR	GHSFLAFPTLR	3	GHSFLAFPTLR3	28986.4	20021.6	17323.2
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	GHSFSFHGAALTAPQQGQK	GHSFSFHGAALTAPQQGQK	4	GHSFSFHGAALTAPQQGQK4		1064.49	4412.21
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	GHSLAGEEFMGLGLGNLVSGGVDK	GHSLAGEEFMGLGLGNLVSGGVDK	3	GHSLAGEEFMGLGLGNLVSGGVDK3	19485		20386.9
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	GHSLAGEEFMGLGLGNLVSGGVDKR	GHSLAGEEFMGLGLGNLVSGGVDKR	4	GHSLAGEEFMGLGLGNLVSGGVDKR4	7032.97	5271.02	10140.4
Q5U1Z9	Q5U1Z9	Q5U1Z9_RAT	Mtx2	Metaxin 2	1	GHSLSDGLDEVQK	GHSLSDGLDEVQK	2	GHSLSDGLDEVQK2	10350.6	8010.23	6528.72
Q5U1Z9	Q5U1Z9	Q5U1Z9_RAT	Mtx2	Metaxin 2	1	GHSLSDGLDEVQK	GHSLSDGLDEVQK	3	GHSLSDGLDEVQK3	41114.1		41466.2
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	GHSQIDSVAGPAMATTK	GHSQIDSVAGPAMATTK	2	GHSQIDSVAGPAMATTK2	8956.89	10648.9	8480.21
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	GHSQIDSVAGPAMATTK	GHSQIDSVAGPAMATTK	3	GHSQIDSVAGPAMATTK3	134435	125567	127092
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	GHSSAGDAIYEVVSLQR	GHSSAGDAIYEVVSLQR	3	GHSSAGDAIYEVVSLQR3	16822	30557.8	21484.6
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	GHSTCLSEGALSPDGTVLATASHDGFVK	GHSTC(UniMod:4)LSEGALSPDGTVLATASHDGFVK	3	GHSTC(UniMod:4)LSEGALSPDGTVLATASHDGFVK3	2410.91	2630.24	
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	GHSTCLSEGALSPDGTVLATASHDGFVK	GHSTC(UniMod:4)LSEGALSPDGTVLATASHDGFVK	4	GHSTC(UniMod:4)LSEGALSPDGTVLATASHDGFVK4	6875.9	17985.7	24747.1
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	GHTADLLDLSWSK	GHTADLLDLSWSK	2	GHTADLLDLSWSK2	20842.1	24278.7	13172
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	GHTADLLDLSWSK	GHTADLLDLSWSK	3	GHTADLLDLSWSK3	224949	259502	208550
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	GHTDSVQDISFDHSGK	GHTDSVQDISFDHSGK	3	GHTDSVQDISFDHSGK3	78327.2	63875.8	59493.9
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	GHTDSVQDISFDHSGK	GHTDSVQDISFDHSGK	4	GHTDSVQDISFDHSGK4	72151	61560.2	58030
A0A0G2K8S4	A0A0G2K8S4	A0A0G2K8S4_RAT	Wdfy2	WD repeat and FYVE domain containing 2	1	GHTGGVTALCWDPVQR	GHTGGVTALC(UniMod:4)WDPVQR	3	GHTGGVTALC(UniMod:4)WDPVQR3	3071.34	1771.43	7421.27
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GHTIPVLNIEVSPFAVETLASSHVIPK	GHTIPVLNIEVSPFAVETLASSHVIPK	3	GHTIPVLNIEVSPFAVETLASSHVIPK3	30234.3	23972.8	19214.7
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GHTIPVLNIEVSPFAVETLASSHVIPK	GHTIPVLNIEVSPFAVETLASSHVIPK	4	GHTIPVLNIEVSPFAVETLASSHVIPK4	408280	604590	353293
Q5U2Z4	Q5U2Z4	Q5U2Z4_RAT	Nfkb2	Nuclear factor kappa B subunit 2	1	GHTPLDLTR	GHTPLDLTR	2	GHTPLDLTR2	2345.52	4699.15	3998.89
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	GHTPTHPGALNQR	GHTPTHPGALNQR	2	GHTPTHPGALNQR2			38292.3
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	GHTPTHPGALNQR	GHTPTHPGALNQR	3	GHTPTHPGALNQR3	45953.6		164360
Q5I0H9	Q5I0H9	PDIA5_RAT	Pdia5	Protein disulfide-isomerase A5	1	GHTVLAGMNVYPPEFENIK	GHTVLAGMNVYPPEFENIK	3	GHTVLAGMNVYPPEFENIK3	21008.5	16418.2	22969.1
Q5I0H9	Q5I0H9	PDIA5_RAT	Pdia5	Protein disulfide-isomerase A5	1	GHTVLAGMNVYPPEFENIKEEYNVR	GHTVLAGMNVYPPEFENIKEEYNVR	4	GHTVLAGMNVYPPEFENIKEEYNVR4	8965.68	14061.5	9987.52
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	GHVDIAVARPLIEEAGLK	GHVDIAVARPLIEEAGLK	4	GHVDIAVARPLIEEAGLK4	2887.13	5530.57	5013.16
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	GHVDILAPTVQELAALEK	GHVDILAPTVQELAALEK	2	GHVDILAPTVQELAALEK2	8921.04		
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	GHVDILAPTVQELAALEK	GHVDILAPTVQELAALEK	3	GHVDILAPTVQELAALEK3	36834.5	21488.7	23902.3
Q6PEC0	Q6PEC0	AP4A_RAT	Nudt2	Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical]	1	GHVDPGENDLETALR	GHVDPGENDLETALR	3	GHVDPGENDLETALR3	4081.25	1342.15	1553.92
Q9QWE9	Q9QWE9	GGT5_RAT	Ggt5	Glutathione hydrolase 5 proenzyme	1	GHVEYEPK	GHVEYEPK	2	GHVEYEPK2	52614.9	47708.9	45278.7
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	GHVFEESQVAGTPMFVVK	GHVFEESQVAGTPMFVVK	3	GHVFEESQVAGTPMFVVK3	63297	57778.9	62527.7
Q8K4V4	Q8K4V4	SNX27_RAT	Snx27	Sorting nexin-27	1	GHVITAISITHFK	GHVITAISITHFK	3	GHVITAISITHFK3	15704.9	11650	14915.5
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	GHVLFRPTVSQQQSCPTCSTSLLNGDFK	GHVLFRPTVSQQQSC(UniMod:4)PTC(UniMod:4)STSLLNGDFK	4	GHVLFRPTVSQQQSC(UniMod:4)PTC(UniMod:4)STSLLNGDFK4	1.25954e+07	1.56817e+07	1.57121e+07
A0A0G2K8F9	A0A0G2K8F9	A0A0G2K8F9_RAT	Pum2	Pumilio RNA-binding family member 2	1	GHVLPLALQMYGCR	GHVLPLALQMYGC(UniMod:4)R	3	GHVLPLALQMYGC(UniMod:4)R3	8349.49	5341.84	7021.51
D4A0T9	D4A0T9	D4A0T9_RAT	Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	1	GHVMASDGAVPAGGALEWSTCSQR	GHVMASDGAVPAGGALEWSTC(UniMod:4)SQR	3	GHVMASDGAVPAGGALEWSTC(UniMod:4)SQR3	19305.1	14952.7	11296.7
P62856	P62856	RS26_RAT	Rps26	Small ribosomal subunit protein eS26	1	GHVQPIR	GHVQPIR	2	GHVQPIR2	28142.9		41183.9
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	GHVSFKPSLDQQR	GHVSFKPSLDQQR	2	GHVSFKPSLDQQR2	6.8389e+06	5.68141e+06	5.18823e+06
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	GHVSFKPSLDQQR	GHVSFKPSLDQQR	3	GHVSFKPSLDQQR3	87820	83982.6	85971.3
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	GHVSIILLGATGDLAK	GHVSIILLGATGDLAK	3	GHVSIILLGATGDLAK3	4627.4	3119.68	1541.38
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	GHVTWSLHGPENATPVSDSPDNHSQTLK	GHVTWSLHGPENATPVSDSPDNHSQTLK	4	GHVTWSLHGPENATPVSDSPDNHSQTLK4	26058.7	20550.9	15877.6
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	GHVVVNTSASK	GHVVVNTSASK	2	GHVVVNTSASK2	18465.5		8349.59
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	GHWDDGTNDSDLEK	GHWDDGTNDSDLEK	3	GHWDDGTNDSDLEK3	2289.03	1884.4	
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	GHWNYPLCSLCDCFLPGTDATTCDSETRK	GHWNYPLC(UniMod:4)SLC(UniMod:4)DC(UniMod:4)FLPGTDATTC(UniMod:4)DSETRK	4	GHWNYPLC(UniMod:4)SLC(UniMod:4)DC(UniMod:4)FLPGTDATTC(UniMod:4)DSETRK4	13142.3	17958	
D4A7C0	D4A7C0	GPN2_RAT	Gpn2	GPN-loop GTPase 2	1	GHYFLFDCPGQVELCTHHTSLR	GHYFLFDC(UniMod:4)PGQVELC(UniMod:4)THHTSLR	4	GHYFLFDC(UniMod:4)PGQVELC(UniMod:4)THHTSLR4	7201.11	5202.64	4352.68
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	GHYFWMLNPFRPPSPPR	GHYFWMLNPFRPPSPPR	3	GHYFWMLNPFRPPSPPR3	237894	264501	244798
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	GHYFWMLNPFRPPSPPR	GHYFWMLNPFRPPSPPR	4	GHYFWMLNPFRPPSPPR4	1.04928e+06	1.23861e+06	1.04883e+06
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	GHYGAWEVITGDEVQILSK	GHYGAWEVITGDEVQILSK	3	GHYGAWEVITGDEVQILSK3	18501.2	31336.7	16753.1
Q6AXY8	Q6AXY8	Q6AXY8_RAT	Dhrs1	Dehydrogenase/reductase 1	1	GHYLCSVYGAR	GHYLC(UniMod:4)SVYGAR	2	GHYLC(UniMod:4)SVYGAR2	3835.98	3981.26	2951.44
Q6AXY8	Q6AXY8	Q6AXY8_RAT	Dhrs1	Dehydrogenase/reductase 1	1	GHYLCSVYGAR	GHYLC(UniMod:4)SVYGAR	3	GHYLC(UniMod:4)SVYGAR3	12092.5	7328.1	9772.16
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	GHYNNVSCAVFHPR	GHYNNVSC(UniMod:4)AVFHPR	2	GHYNNVSC(UniMod:4)AVFHPR2	7295.56	5284.76	4586.55
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	GHYNNVSCAVFHPR	GHYNNVSC(UniMod:4)AVFHPR	3	GHYNNVSC(UniMod:4)AVFHPR3	205574	187894	181566
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	GHYNNVSCAVFHPR	GHYNNVSC(UniMod:4)AVFHPR	4	GHYNNVSC(UniMod:4)AVFHPR4	102277	111294	89566.3
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	GHYTEGAELIETVMDVVR	GHYTEGAELIETVMDVVR	3	GHYTEGAELIETVMDVVR3	29434.7	28814.8	34548.3
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	GHYTEGAELIETVMDVVR	GHYTEGAELIETVMDVVR	4	GHYTEGAELIETVMDVVR4	49644.3	58447.6	46371
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	GHYTEGAELIETVMDVVRR	GHYTEGAELIETVMDVVRR	3	GHYTEGAELIETVMDVVRR3	25589.3	40381.5	39044
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	GHYTEGAELIETVMDVVRR	GHYTEGAELIETVMDVVRR	4	GHYTEGAELIETVMDVVRR4	102277	143403	105518
B4F7C2	B4F7C2	B4F7C2_RAT	Tubb4a	Tubulin beta chain	1	GHYTEGAELVDAVLDVVR	GHYTEGAELVDAVLDVVR	2	GHYTEGAELVDAVLDVVR2	2734.63	6395.03	3817.91
B4F7C2	B4F7C2	B4F7C2_RAT	Tubb4a	Tubulin beta chain	1	GHYTEGAELVDAVLDVVR	GHYTEGAELVDAVLDVVR	3	GHYTEGAELVDAVLDVVR3	27431.9	24214.7	18787
B4F7C2	B4F7C2	B4F7C2_RAT	Tubb4a	Tubulin beta chain	1	GHYTEGAELVDAVLDVVRK	GHYTEGAELVDAVLDVVRK	4	GHYTEGAELVDAVLDVVRK4	3330.76		
P85108	P69897;Q4QRB4;Q6P9T8;P85108;Q4QQV0;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	GHYTEGAELVDSVLDVVR	GHYTEGAELVDSVLDVVR	2	GHYTEGAELVDSVLDVVR2	553578	510962	467053
P85108	P69897;Q4QRB4;Q6P9T8;P85108;Q4QQV0;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	GHYTEGAELVDSVLDVVR	GHYTEGAELVDSVLDVVR	3	GHYTEGAELVDSVLDVVR3	925094	1.01809e+06	940839
P85108	P69897;Q4QRB4;Q6P9T8;P85108;Q4QQV0;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	GHYTEGAELVDSVLDVVR	GHYTEGAELVDSVLDVVR	4	GHYTEGAELVDSVLDVVR4	34481.4	27650.5	19234.2
P85108	P69897;Q4QRB4;Q6P9T8;P85108;Q4QQV0;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	GHYTEGAELVDSVLDVVRK	GHYTEGAELVDSVLDVVRK	3	GHYTEGAELVDSVLDVVRK3	476921	592146	564044
P85108	P69897;Q4QRB4;Q6P9T8;P85108;Q4QQV0;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	GHYTEGAELVDSVLDVVRK	GHYTEGAELVDSVLDVVRK	4	GHYTEGAELVDSVLDVVRK4	1.1293e+06	1.4306e+06	1.41015e+06
Q5XIF6	P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	GHYTIGK	GHYTIGK	1	GHYTIGK1		487112	
Q5XIF6	P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	GHYTIGK	GHYTIGK	2	GHYTIGK2		6.71534e+06	
Q6AYZ1	P68370;Q6AYZ1;Q6P9V9	TBA1C_RAT	Tuba1c	Tubulin alpha-1C chain	0	GHYTIGKEIIDLVLDR	GHYTIGKEIIDLVLDR	2	GHYTIGKEIIDLVLDR2	35111.6	3047.82	3138.08
Q6AYZ1	P68370;Q6AYZ1;Q6P9V9	TBA1C_RAT	Tuba1c	Tubulin alpha-1C chain	0	GHYTIGKEIIDLVLDR	GHYTIGKEIIDLVLDR	3	GHYTIGKEIIDLVLDR3	23086.6	20926.3	21350.1
Q6AYZ1	P68370;Q6AYZ1;Q6P9V9	TBA1C_RAT	Tuba1c	Tubulin alpha-1C chain	0	GHYTIGKEIIDLVLDR	GHYTIGKEIIDLVLDR	4	GHYTIGKEIIDLVLDR4	61602.1	16247.5	26230.2
Q6AYZ1	P68370;Q6AYZ1;Q6P9V9	TBA1C_RAT	Tuba1c	Tubulin alpha-1C chain	0	GHYTIGKEIIDLVLDRIR	GHYTIGKEIIDLVLDRIR	4	GHYTIGKEIIDLVLDRIR4	11451.6	6937.44	16891.4
Q5XIF6	Q5XIF6	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	1	GHYTIGKEIIDPVLDR	GHYTIGKEIIDPVLDR	3	GHYTIGKEIIDPVLDR3	22939.4	24411.7	32334.6
Q5XIF6	Q5XIF6	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	1	GHYTIGKEIIDPVLDR	GHYTIGKEIIDPVLDR	4	GHYTIGKEIIDPVLDR4	35239.8	48703	49286.4
Q5XIF6	Q5XIF6	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	1	GHYTIGKEIIDPVLDRIR	GHYTIGKEIIDPVLDRIR	4	GHYTIGKEIIDPVLDRIR4	27197	35895.6	39232
Q6AY56	Q6AY56	TBA8_RAT	Tuba8	Tubulin alpha-8 chain	1	GHYTVGK	GHYTVGK	1	GHYTVGK1			2426.18
Q6AY56	Q6AY56	TBA8_RAT	Tuba8	Tubulin alpha-8 chain	1	GHYTVGK	GHYTVGK	2	GHYTVGK2			463686
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	GHYVLCDFGSATNK	GHYVLC(UniMod:4)DFGSATNK	2	GHYVLC(UniMod:4)DFGSATNK2	13890.4	15027.9	14528.2
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	GHYVLCDFGSATNK	GHYVLC(UniMod:4)DFGSATNK	3	GHYVLC(UniMod:4)DFGSATNK3	34961.6	36342.9	45338.1
Q68FQ7	Q68FQ7	RPAP3_RAT	Rpap3	RNA polymerase II-associated protein 3	1	GIAADSTNALLPANR	GIAADSTNALLPANR	2	GIAADSTNALLPANR2	4383.81	5010.17	
Q6AXR4	Q6AXR4	HEXB_RAT	Hexb	Beta-hexosaminidase subunit beta	1	GIAAQPLFTGYCNYENK	GIAAQPLFTGYC(UniMod:4)NYENK	2	GIAAQPLFTGYC(UniMod:4)NYENK2	12163.3	7594.18	5107.01
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	GIACEISK	GIAC(UniMod:4)EISK	1	GIAC(UniMod:4)EISK1	64869	33307.9	30608.3
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	GIACEISK	GIAC(UniMod:4)EISK	2	GIAC(UniMod:4)EISK2	4.61587e+06	3.72148e+06	3.79222e+06
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	GIACHICSNPNK	GIAC(UniMod:4)HIC(UniMod:4)SNPNK	3	GIAC(UniMod:4)HIC(UniMod:4)SNPNK3	11632.7	26089.5	13738.2
A0A0G2JWA3	A0A0G2JWA3	A0A0G2JWA3_RAT	Xpo7	Exportin 7	1	GIAFAFNAK	GIAFAFNAK	2	GIAFAFNAK2	4263.94	6353.56	4582.29
Q6AYD3	Q6AYD3	PA2G4_RAT	Pa2g4	Proliferation-associated protein 2G4	1	GIAFPTSISVNNCVCHFSPLK	GIAFPTSISVNNC(UniMod:4)VC(UniMod:4)HFSPLK	3	GIAFPTSISVNNC(UniMod:4)VC(UniMod:4)HFSPLK3	31230.9	21949.7	14776.9
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	GIAFQNPEIVAK	GIAFQNPEIVAK	2	GIAFQNPEIVAK2	29881.4	37097.4	30079.4
P53534	P53534	PYGB_RAT	Pygb	Glycogen phosphorylase, brain form (Fragment)	1	GIAGLGDVAEVR	GIAGLGDVAEVR	2	GIAGLGDVAEVR2	12219.8	13870.9	9448.76
D3ZMQ3	D3ZMQ3	D3ZMQ3_RAT	Itga4	Integrin subunit alpha 4	1	GIAGTLTDLVK	GIAGTLTDLVK	2	GIAGTLTDLVK2	9965.81	8018.72	11540.4
O08836	O08836	IGBP1_RAT	Igbp1	Immunoglobulin-binding protein 1	1	GIAKPPSADFQR	GIAKPPSADFQR	3	GIAKPPSADFQR3	11259.5	7914.43	11418.8
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GIALDPAMGK	GIALDPAMGK	1	GIALDPAMGK1	9574.69	10620	
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GIALDPAMGK	GIALDPAMGK	2	GIALDPAMGK2	393028	482496	445815
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	GIALWGGDK	GIALWGGDK	1	GIALWGGDK1		3093.32	2626.35
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	GIALWGGDK	GIALWGGDK	2	GIALWGGDK2	163568	150190	162927
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	GIALWGGDKFK	GIALWGGDKFK	2	GIALWGGDKFK2	10191.2	14096.8	6492.55
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	GIALWGGDKFK	GIALWGGDKFK	3	GIALWGGDKFK3	72291.9	71704.8	115657
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	GIANATK	GIANATK	1	GIANATK1	3283.68		
P18292	P18292	THRB_RAT	F2	Prothrombin	1	GIAPWQVMLFR	GIAPWQVMLFR	2	GIAPWQVMLFR2	3012		6786.35
P18292	P18292	THRB_RAT	F2	Prothrombin	1	GIAPWQVMLFR	GIAPWQVMLFR	3	GIAPWQVMLFR3	563434	694096	668518
P18292	P18292	THRB_RAT	F2	Prothrombin	1	GIAPWQVMLFRK	GIAPWQVMLFRK	2	GIAPWQVMLFRK2	25632.4	20906.2	17623.8
P18292	P18292	THRB_RAT	F2	Prothrombin	1	GIAPWQVMLFRK	GIAPWQVMLFRK	3	GIAPWQVMLFRK3	197881	200773	212803
P67874	P67874	CSK2B_RAT	Csnk2b	Casein kinase II subunit beta	1	GIAQMLEK	GIAQMLEK	2	GIAQMLEK2	202251	188835	192678
F7EXP7	F7EXP7	F7EXP7_RAT	Snx7	Sorting nexin 7	1	GIASCIDQCCK	GIASC(UniMod:4)IDQC(UniMod:4)C(UniMod:4)K	2	GIASC(UniMod:4)IDQC(UniMod:4)C(UniMod:4)K2	4826.76	2031.89	3026.16
O88917	O88917	AGRL1_RAT	Adgrl1	Adhesion G protein-coupled receptor L1	1	GIASFQCLPALGLWNPR	GIASFQC(UniMod:4)LPALGLWNPR	2	GIASFQC(UniMod:4)LPALGLWNPR2		6785.12	4744.23
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	GIATNDVGIQK	GIATNDVGIQK	2	GIATNDVGIQK2	39571.2	32843.6	43354
P54001	P54001	P4HA1_RAT	P4ha1	Prolyl 4-hydroxylase subunit alpha-1	1	GIAVDYLPER	GIAVDYLPER	2	GIAVDYLPER2	48563.5	42265.8	48467.8
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	GIAVHPELFSIDNGLLTPTLK	GIAVHPELFSIDNGLLTPTLK	3	GIAVHPELFSIDNGLLTPTLK3	7700.37	14404.4	17997.1
Q6AY41	Q6AY41	CC50A_RAT	Tmem30a	Cell cycle control protein 50A	1	GIAWWTDK	GIAWWTDK	2	GIAWWTDK2	224100	197181	227646
P58751	P58751	RELN_RAT	Reln	Reelin	1	GICDSGR	GIC(UniMod:4)DSGR	2	GIC(UniMod:4)DSGR2	197205		249860
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	GICECGACK	GIC(UniMod:4)EC(UniMod:4)GAC(UniMod:4)K	2	GIC(UniMod:4)EC(UniMod:4)GAC(UniMod:4)K2	678409	748503	996811
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	GICEQNLNPDANPR	GIC(UniMod:4)EQNLNPDANPR	2	GIC(UniMod:4)EQNLNPDANPR2	4452.89	7404.65	4644.79
B0BN85	B0BN85	SGT1_RAT	Sugt1	Protein SGT1 homolog	1	GICEYYEK	GIC(UniMod:4)EYYEK	2	GIC(UniMod:4)EYYEK2	6537.3	14111.1	6323.49
Q8VBX1	Q8VBX1	LIPE_RAT	Lipg	Endothelial lipase	1	GICLSCR	GIC(UniMod:4)LSC(UniMod:4)R	2	GIC(UniMod:4)LSC(UniMod:4)R2	139880	116916	136517
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	GICNASDTR	GIC(UniMod:4)NASDTR	2	GIC(UniMod:4)NASDTR2	12368.7	10120.4	15524.6
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	GICNLLDNYHVPELIK	GIC(UniMod:4)NLLDNYHVPELIK	3	GIC(UniMod:4)NLLDNYHVPELIK3	12488.7	5534.45	
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	GICSLVR	GIC(UniMod:4)SLVR	2	GIC(UniMod:4)SLVR2	179831	279102	221172
P01026	P01026	CO3_RAT	C3	Complement C3	1	GICVADPYEITVMQDFFIDLR	GIC(UniMod:4)VADPYEITVMQDFFIDLR	3	GIC(UniMod:4)VADPYEITVMQDFFIDLR3	10848		
P24594	P24594	IBP5_RAT	Igfbp5	Insulin-like growth factor-binding protein 5	1	GICWCVDK	GIC(UniMod:4)WC(UniMod:4)VDK	2	GIC(UniMod:4)WC(UniMod:4)VDK2	33545.2	21953.6	16439.9
D3ZAP9	D3ZAP9	D3ZAP9_RAT	Gpd1l1	Glycerol-3-phosphate dehydrogenase [NAD(+)]	1	GIDEGPDGLK	GIDEGPDGLK	2	GIDEGPDGLK2	30753.8	21760.7	24854.5
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	GIDIHGVPYVINVTLPDEK	GIDIHGVPYVINVTLPDEK	3	GIDIHGVPYVINVTLPDEK3	16072.6	12290.8	9804.2
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	GIDLGDIQSSIESIK	GIDLGDIQSSIESIK	2	GIDLGDIQSSIESIK2	8827.89	8656.29	12329.7
P08461	A0A8I6B5J2;P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	0	GIDLTQVK	GIDLTQVK	2	GIDLTQVK2	124644	95344.1	132859
A0A8I6A9E8	A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	1	GIDMIEFPK	GIDMIEFPK	2	GIDMIEFPK2	30486.9	23399.2	17574.6
A0A8I6A9E8	A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	1	GIDMIEFPKK	GIDMIEFPKK	3	GIDMIEFPKK3	3783.84	4821.52	4351.3
F7ELS2	F7ELS2	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	1	GIDPFSLDALAK	GIDPFSLDALAK	2	GIDPFSLDALAK2	225325	270297	224559
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	GIDPPQVLSPDMVPPSER	GIDPPQVLSPDMVPPSER	2	GIDPPQVLSPDMVPPSER2	7660.12	12316.8	10211.6
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	GIDQCIPLFVEAALER	GIDQC(UniMod:4)IPLFVEAALER	2	GIDQC(UniMod:4)IPLFVEAALER2	30791.5	28061.2	27535.1
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	GIDQCIPLFVEAALER	GIDQC(UniMod:4)IPLFVEAALER	3	GIDQC(UniMod:4)IPLFVEAALER3	11636.6	17668.8	17926.8
A0A8I5ZX76	A0A8I5ZX76	A0A8I5ZX76_RAT	Eif3k	Eukaryotic translation initiation factor 3 subunit K	1	GIDRYNPENLATLER	GIDRYNPENLATLER	3	GIDRYNPENLATLER3	4656.43	5838.42	4916.32
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	GIDSEGHAANFVETEQIVHYSGNR	GIDSEGHAANFVETEQIVHYSGNR	3	GIDSEGHAANFVETEQIVHYSGNR3	10216.7	4409.41	6705.42
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	GIDSEGHAANFVETEQIVHYSGNR	GIDSEGHAANFVETEQIVHYSGNR	4	GIDSEGHAANFVETEQIVHYSGNR4	139393	134491	134321
Q64649	Q64649	KPB1_RAT	Phka1	Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform	1	GIDVETIAEVYPIR	GIDVETIAEVYPIR	2	GIDVETIAEVYPIR2	1538.76		
Q5RKI1	Q5RKI1;A0A8I6GF11;Q6P3V8	IF4A2_RAT	Eif4a2	Eukaryotic initiation factor 4A-II	0	GIDVQQVSLVINYDLPTNR	GIDVQQVSLVINYDLPTNR	3	GIDVQQVSLVINYDLPTNR3	19729.5	20533.6	15356.4
P57113	P57113	MAAI_RAT	Gstz1	Maleylacetoacetate isomerase	1	GIDYEIVPINLIK	GIDYEIVPINLIK	2	GIDYEIVPINLIK2	14887.4	13373.5	15185.4
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	GIEAGAEDLEILPNGLTFFSTGLK	GIEAGAEDLEILPNGLTFFSTGLK	3	GIEAGAEDLEILPNGLTFFSTGLK3	1.96317e+06	2.05048e+06	2.17624e+06
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	GIEAGAEDLEILPNGLTFFSTGLK	GIEAGAEDLEILPNGLTFFSTGLK	4	GIEAGAEDLEILPNGLTFFSTGLK4	6820.62	5088.18	11605.8
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	GIEAGAEDLEILPNGLTFFSTGLKYPGIK	GIEAGAEDLEILPNGLTFFSTGLKYPGIK	4	GIEAGAEDLEILPNGLTFFSTGLKYPGIK4	7000.25	5674.78	5845.61
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	GIEAVGGK	GIEAVGGK	1	GIEAVGGK1	2373.01	4631.99	2845.25
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	GIEDERDYYK	GIEDERDYYK	3	GIEDERDYYK3	16271.7		16059.1
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	GIEEEEILPGFILCDLNNLCHSGR	GIEEEEILPGFILC(UniMod:4)DLNNLC(UniMod:4)HSGR	3	GIEEEEILPGFILC(UniMod:4)DLNNLC(UniMod:4)HSGR3	51031.3	52310.3	44279.2
B2RYN7	B2RYN7	SPAST_RAT	Spast	Spastin	1	GIEELEK	GIEELEK	1	GIEELEK1	505582	693423	
B2RYN7	B2RYN7	SPAST_RAT	Spast	Spastin	1	GIEELEK	GIEELEK	2	GIEELEK2		3.46798e+07	3.61212e+07
Q6AXT5	Q6AXT5	RAB21_RAT	Rab21	Ras-related protein Rab-21	1	GIEELFLDLCKR	GIEELFLDLC(UniMod:4)KR	3	GIEELFLDLC(UniMod:4)KR3	5165.54	5307.62	3930.16
A0A8I5ZP70	A0A8I5ZP70	A0A8I5ZP70_RAT	Tom1l2	Target of myb1 like 2 membrane trafficking protein	1	GIEFPMADLDALSPIHTPQR	GIEFPMADLDALSPIHTPQR	3	GIEFPMADLDALSPIHTPQR3	57371.1	54477.4	58019.6
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	GIEGAQASPLIPGAGEIINADNIIK	GIEGAQASPLIPGAGEIINADNIIK	3	GIEGAQASPLIPGAGEIINADNIIK3	40354.3	48691.1	46502.3
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	GIEGHSVDNSDLSGELGGFNSESGEQAR	GIEGHSVDNSDLSGELGGFNSESGEQAR	3	GIEGHSVDNSDLSGELGGFNSESGEQAR3	12272.5	8775.67	10910.9
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	GIEILNR	GIEILNR	1	GIEILNR1	233480	296901	259853
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	GIEILNR	GIEILNR	2	GIEILNR2	601191	633578	1.02418e+08
Q6P6R2	Q6P6R2	DLDH_RAT	Dld	Dihydrolipoyl dehydrogenase, mitochondrial	1	GIEIPEVR	GIEIPEVR	2	GIEIPEVR2	304307	281162	292410
D3ZDE4	D3ZDE4	D3ZDE4_RAT	Dguok	Deoxyguanosine kinase	1	GIELAYLK	GIELAYLK	2	GIELAYLK2	25608.8	31074.5	41324.4
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	GIELIPQVR	GIELIPQVR	2	GIELIPQVR2	11089.1		
Q4KM77	Q4KM77	EI24_RAT	Ei24	Etoposide-induced protein 2.4 homolog	1	GIEMHQR	GIEMHQR	2	GIEMHQR2	7138.82	4451.02	7987.46
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	GIEMLNK	GIEMLNK	1	GIEMLNK1	19268.8	17364.9	3.33028e+06
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	GIEMLNK	GIEMLNK	2	GIEMLNK2	1.41284e+06	1.12698e+06	1.66392e+06
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	GIEMLNKAR	GIEMLNKAR	2	GIEMLNKAR2	2222.67	2301.03	
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	GIEMLNKAREDHLVPER	GIEMLNKAREDHLVPER	4	GIEMLNKAREDHLVPER4	23498.5	22563.8	30538.6
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	GIEPGSLR	GIEPGSLR	2	GIEPGSLR2	42719.9	43591.2	39670.9
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	GIEQAVQSHAVAEEEAR	GIEQAVQSHAVAEEEAR	3	GIEQAVQSHAVAEEEAR3	89680.6	83437.5	92585.9
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	GIEQAVQSHAVAEEEARK	GIEQAVQSHAVAEEEARK	3	GIEQAVQSHAVAEEEARK3	16671.1	19379	14884.1
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	GIEQAVQSHAVAEEEARK	GIEQAVQSHAVAEEEARK	4	GIEQAVQSHAVAEEEARK4	32775.8	32377	31804.8
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	GIESQTQVGPPALSR	GIESQTQVGPPALSR	2	GIESQTQVGPPALSR2	10577.3	6924.89	8709.44
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	GIETPQCDQSTGQCVCVEGVEGPR	GIETPQC(UniMod:4)DQSTGQC(UniMod:4)VC(UniMod:4)VEGVEGPR	3	GIETPQC(UniMod:4)DQSTGQC(UniMod:4)VC(UniMod:4)VEGVEGPR3	13453.4	11765.9	6769.43
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	GIFEALRPLETLPVEGLIR	GIFEALRPLETLPVEGLIR	3	GIFEALRPLETLPVEGLIR3	18888	25476	23745.8
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	GIFGFTDSDCIGK	GIFGFTDSDC(UniMod:4)IGK	2	GIFGFTDSDC(UniMod:4)IGK2	9349.52	15644.4	14417
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	GIFLDTIVPK	GIFLDTIVPK	2	GIFLDTIVPK2	47890.6	48409.7	47379.8
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	GIFLHLSNQHEFGR	GIFLHLSNQHEFGR	3	GIFLHLSNQHEFGR3	11766.7	10400.2	13491.8
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	GIFLHLSNQHEFGR	GIFLHLSNQHEFGR	4	GIFLHLSNQHEFGR4	4252.76		2323.73
P16036	P16036	S25A3_RAT	Slc25a3	Solute carrier family 25 member 3	1	GIFNGFSITLK	GIFNGFSITLK	2	GIFNGFSITLK2	89683.3	40465.8	145575
P16036	P16036	S25A3_RAT	Slc25a3	Solute carrier family 25 member 3	1	GIFNGFSITLKEDGVR	GIFNGFSITLKEDGVR	3	GIFNGFSITLKEDGVR3	11585	13427	7360.32
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	GIFPSGLFQGDTFR	GIFPSGLFQGDTFR	2	GIFPSGLFQGDTFR2	78274.8	109153	93948.3
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	GIFPVLCK	GIFPVLC(UniMod:4)K	1	GIFPVLC(UniMod:4)K1	9257.14	11127.7	9568.29
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	GIFPVLCK	GIFPVLC(UniMod:4)K	2	GIFPVLC(UniMod:4)K2	707340	615930	665434
Q4V8B7	Q4V8B7	HSDL1_RAT	Hsdl1	Inactive hydroxysteroid dehydrogenase-like protein 1	1	GIFVQSLIPFYVTSSVTAPGSFLR	GIFVQSLIPFYVTSSVTAPGSFLR	3	GIFVQSLIPFYVTSSVTAPGSFLR3		6468.32	9146.9
Q6P7R8	Q6P7R8	DHB12_RAT	Hsd17b12	Very-long-chain 3-oxoacyl-CoA reductase	1	GIFVQSVLPFFVATK	GIFVQSVLPFFVATK	2	GIFVQSVLPFFVATK2	22865.1	30438.4	58439.8
P32089	P32089	TXTP_RAT	Slc25a1	Tricarboxylate transport protein, mitochondrial	1	GIGDCVR	GIGDC(UniMod:4)VR	2	GIGDC(UniMod:4)VR2	254155	233652	261626
Q5XI83	Q5XI83	VP35L_RAT	Vps35l	VPS35 endosomal protein-sorting factor-like	1	GIGDPLVSVYAR	GIGDPLVSVYAR	2	GIGDPLVSVYAR2	22121.2	12828.1	11095.9
P47727	P47727	CBR1_RAT	Cbr1	Carbonyl reductase [NADPH] 1	1	GIGFAIVR	GIGFAIVR	2	GIGFAIVR2	34033.6	35355.8	34043.5
Q5PPI8	Q5PPI8	Q5PPI8_RAT	Rmc1	Regulator of MON1-CCZ1	1	GIGGHDNISAR	GIGGHDNISAR	2	GIGGHDNISAR2	3416.19		2057.81
F7F0H6	F7F0H6	F7F0H6_RAT	Ifgga2l1	Similar to interferon-inducible GTPase	1	GIGHEEEGAAEIGVVETTAER	GIGHEEEGAAEIGVVETTAER	3	GIGHEEEGAAEIGVVETTAER3	1520.9	1952.82	
A0A8I5ZN47	A0A8I5ZN47	A0A8I5ZN47_RAT	Mtrex	Mtr4 exosome RNA helicase	1	GIGIHHGGLLPILK	GIGIHHGGLLPILK	3	GIGIHHGGLLPILK3	11614.1		
F1M5J3	F1M5J3	F1M5J3_RAT	Nipa1	NIPA magnesium transporter 1	1	GIGLAAQDILHNNPSSQR	GIGLAAQDILHNNPSSQR	3	GIGLAAQDILHNNPSSQR3	2867.9		
Q9WTV5	Q9WTV5	PSMD9_RAT	Psmd9	26S proteasome non-ATPase regulatory subunit 9	1	GIGMNEPLVDCEGYPR	GIGMNEPLVDC(UniMod:4)EGYPR	2	GIGMNEPLVDC(UniMod:4)EGYPR2	41667.7	36914.3	33247
D4AEP0	D4AEP0	D4AEP0_RAT	Adss	Adenylosuccinate synthetase isozyme 2	1	GIGPVYSSK	GIGPVYSSK	2	GIGPVYSSK2	11344.6	5550.16	6984.3
A0A8I5ZR58	A0A8I5ZR58	A0A8I5ZR58_RAT	Cux1-ps1	Protein CASP	1	GIGSDDTELR	GIGSDDTELR	2	GIGSDDTELR2	45893.7	30986.5	37498.4
A0A0G2JT44	A0A0G2JT44	A0A0G2JT44_RAT	Tmc6	Transmembrane channel-like protein	1	GIHALTVFCSWDYK	GIHALTVFC(UniMod:4)SWDYK	2	GIHALTVFC(UniMod:4)SWDYK2	785.327	4776.08	6553.37
A0A0G2JT44	A0A0G2JT44	A0A0G2JT44_RAT	Tmc6	Transmembrane channel-like protein	1	GIHALTVFCSWDYK	GIHALTVFC(UniMod:4)SWDYK	3	GIHALTVFC(UniMod:4)SWDYK3	8411.62	4448.42	6482.61
D3ZRN3	D3ZRN3	D3ZRN3_RAT	Actbl2	Actin, beta-like 2	1	GIHETTFNSIMK	GIHETTFNSIMK	2	GIHETTFNSIMK2	63620.4	44963.7	41413.9
D3ZRN3	D3ZRN3	D3ZRN3_RAT	Actbl2	Actin, beta-like 2	1	GIHETTFNSIMK	GIHETTFNSIMK	3	GIHETTFNSIMK3	314464	310831	293468
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	GIHEWNFNASSVR	GIHEWNFNASSVR	3	GIHEWNFNASSVR3	9232.14	8248.02	8871.96
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	GIHEYDFEIK	GIHEYDFEIK	2	GIHEYDFEIK2	33036.4	27682.6	22221.4
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	GIHEYDFEIK	GIHEYDFEIK	3	GIHEYDFEIK3	69251.5	105272	128772
P13264	P13264	GLSK_RAT	Gls	Glutaminase kidney isoform, mitochondrial	1	GIHFCHDLVSLCNFHNYDNLR	GIHFC(UniMod:4)HDLVSLC(UniMod:4)NFHNYDNLR	3	GIHFC(UniMod:4)HDLVSLC(UniMod:4)NFHNYDNLR3	2692.51	2435.63	
P13264	P13264	GLSK_RAT	Gls	Glutaminase kidney isoform, mitochondrial	1	GIHFCHDLVSLCNFHNYDNLR	GIHFC(UniMod:4)HDLVSLC(UniMod:4)NFHNYDNLR	4	GIHFC(UniMod:4)HDLVSLC(UniMod:4)NFHNYDNLR4	11423.2	17548.4	23518.5
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	GIHGMFPLHLAALSGFSDCCR	GIHGMFPLHLAALSGFSDC(UniMod:4)C(UniMod:4)R	4	GIHGMFPLHLAALSGFSDC(UniMod:4)C(UniMod:4)R4	7112.23	1860.52	5186.47
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	GIHPTIISESFQK	GIHPTIISESFQK	2	GIHPTIISESFQK2	118841	114927	100838
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	GIHPTIISESFQK	GIHPTIISESFQK	3	GIHPTIISESFQK3	114966	121162	121221
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	GIHVDQSELLCK	GIHVDQSELLC(UniMod:4)K	2	GIHVDQSELLC(UniMod:4)K2			2226.13
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	GIHVDQSELLCK	GIHVDQSELLC(UniMod:4)K	3	GIHVDQSELLC(UniMod:4)K3	28261	33340.2	22916.4
Q68FU3	Q68FU3	ETFB_RAT	Etfb	Electron transfer flavoprotein subunit beta	1	GIHVEVPGAEAENLGPLQVAR	GIHVEVPGAEAENLGPLQVAR	3	GIHVEVPGAEAENLGPLQVAR3	235967	220114	244327
D4A9N5	D4A9N5	D4A9N5_RAT	Trim25	Tripartite motif-containing 25	1	GIHYWEVELQK	GIHYWEVELQK	3	GIHYWEVELQK3	7046.26	1629.49	6684.06
P97535	P97535	PLA1A_RAT	Pla1a	Phospholipase A1 member A	1	GIIAHQNPHCQINQVK	GIIAHQNPHC(UniMod:4)QINQVK	2	GIIAHQNPHC(UniMod:4)QINQVK2	3860.75	3087.94	4994.83
P97535	P97535	PLA1A_RAT	Pla1a	Phospholipase A1 member A	1	GIIAHQNPHCQINQVK	GIIAHQNPHC(UniMod:4)QINQVK	3	GIIAHQNPHC(UniMod:4)QINQVK3	48048.3	42836.9	46854
P97535	P97535	PLA1A_RAT	Pla1a	Phospholipase A1 member A	1	GIIAHQNPHCQINQVK	GIIAHQNPHC(UniMod:4)QINQVK	4	GIIAHQNPHC(UniMod:4)QINQVK4	61628.7	50856.5	55054.2
Q5U2N0	Q5U2N0	PYRG2_RAT	Ctps2	CTP synthase 2	1	GIIASSIGTILK	GIIASSIGTILK	2	GIIASSIGTILK2	6847.24	7805.54	11269.4
Q63060	Q63060;A0A8I6AQ25;D3Z8F7	GLPK_RAT	Gk	Glycerol kinase	0	GIICGLTQFTNK	GIIC(UniMod:4)GLTQFTNK	2	GIIC(UniMod:4)GLTQFTNK2	24361.7	14158.2	21036.1
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	GIIDDDDFRR	GIIDDDDFRR	3	GIIDDDDFRR3	6388.96	4443.36	
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	GIIDGFGQR	GIIDGFGQR	2	GIIDGFGQR2	37195.9	42664.2	44714.2
Q07803	Q07803	EFGM_RAT	Gfm1	Elongation factor G, mitochondrial	1	GIIDLIEER	GIIDLIEER	2	GIIDLIEER2	8819.8	6450.23	5635.31
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	GIIDLPDGGEK	GIIDLPDGGEK	2	GIIDLPDGGEK2	16421.3	17337.2	22758.3
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	GIIDLPDGGEKR	GIIDLPDGGEKR	3	GIIDLPDGGEKR3	14423.9	21000.3	23869
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	GIIDPTK	GIIDPTK	1	GIIDPTK1	27439.3	24634.7	20562.2
Q64542	Q64542	AT2B4_RAT	Atp2b4	Plasma membrane calcium-transporting ATPase 4	1	GIIDSNIGEQR	GIIDSNIGEQR	2	GIIDSNIGEQR2	37116.4	26599.9	29106.2
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	GIIDSQIR	GIIDSQIR	2	GIIDSQIR2		2991.55	5645.65
P11505	P11505	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	1	GIIDSTVSEQR	GIIDSTVSEQR	2	GIIDSTVSEQR2	31398	24565.8	23009.3
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	GIIELLGSK	GIIELLGSK	2	GIIELLGSK2	65427.4	63658.6	47594
A0A8I6AJ04	A0A8I6AJ04	A0A8I6AJ04_RAT	Pithd1	PITH domain containing 1	1	GIIIMGEDDDSHPSEMR	GIIIMGEDDDSHPSEMR	3	GIIIMGEDDDSHPSEMR3	12299.9	12717.5	10407.3
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	GIILVGNEEQK	GIILVGNEEQK	2	GIILVGNEEQK2	44151.7	40428.4	35946.4
P35284	P35284	RAB12_RAT	Rab12	Ras-related protein Rab-12	1	GIILVYDITK	GIILVYDITK	2	GIILVYDITK2	24200.3	31335.8	23985
P35284	P35284	RAB12_RAT	Rab12	Ras-related protein Rab-12	1	GIILVYDITKK	GIILVYDITKK	2	GIILVYDITKK2	1987.35		
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	GIINPFPACR	GIINPFPAC(UniMod:4)R	2	GIINPFPAC(UniMod:4)R2	9665.32	16763.5	8389.61
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	GIIPETATLFK	GIIPETATLFK	2	GIIPETATLFK2	39549.1	50421	50778.8
P97694	P63035;P97696;P97694	CYH1_RAT	Cyth1	Cytohesin-1	0	GIIPLENLSIR	GIIPLENLSIR	2	GIIPLENLSIR2	87062.6	87241.8	81350.7
A0A0G2K0A0	A0A0G2K0A0	A0A0G2K0A0_RAT	Cyth4	Cytohesin 4	1	GIIPLENLSVQK	GIIPLENLSVQK	2	GIIPLENLSVQK2	18507.4	6115.52	
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	GIIPQLFSR	GIIPQLFSR	2	GIIPQLFSR2	7454.39	5096.8	22467.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GIISALLVPPETEEDK	GIISALLVPPETEEDK	2	GIISALLVPPETEEDK2	819221	555501	593243
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GIISALLVPPETEEDK	GIISALLVPPETEEDK	3	GIISALLVPPETEEDK3	185345	108432	149849
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	GIISILDEECLRPGEATDLTFLEK	GIISILDEEC(UniMod:4)LRPGEATDLTFLEK	3	GIISILDEEC(UniMod:4)LRPGEATDLTFLEK3	193614	186748	251494
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GIISLLEAMK	GIISLLEAMK	2	GIISLLEAMK2	2.47027e+06	3.10363e+06	4.08085e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GIISLLEAMKGELQR	GIISLLEAMKGELQR	3	GIISLLEAMKGELQR3	11097.7	15175	10809.7
A0A8I5ZT10	A0A8I5ZT10	A0A8I5ZT10_RAT	Ccm2	CCM2 scaffold protein	1	GIITDSFGR	GIITDSFGR	2	GIITDSFGR2	11628.5	11495	10673.9
D3ZFJ6	D3ZFJ6	D3ZFJ6_RAT	Lactb	Lactamase, beta	1	GIIVSIICNMQSVGLNSTALK	GIIVSIIC(UniMod:4)NMQSVGLNSTALK	3	GIIVSIIC(UniMod:4)NMQSVGLNSTALK3	3569.4	3064.15	5012.84
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	GIKPITLELGGK	GIKPITLELGGK	2	GIKPITLELGGK2	42173.3	35203.7	32798.2
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	GIKPITLELGGK	GIKPITLELGGK	3	GIKPITLELGGK3	158907	153765	143369
P47816	P47816	PDCD2_RAT	Pdcd2	Programmed cell death protein 2	1	GIKPIWISGENIPQEK	GIKPIWISGENIPQEK	3	GIKPIWISGENIPQEK3	23740.6	23799.5	31165.2
Q4QQS7	Q4QQS7	Q4QQS7_RAT	Umps	Uridine 5'-monophosphate synthase	1	GILAAANR	GILAAANR	2	GILAAANR2	2947.46	6668.48	6481.49
P05065	Q6AY07;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	GILAADESTGSIAK	GILAADESTGSIAK	2	GILAADESTGSIAK2	107200	122172	140285
P09117	P09117	ALDOC_RAT	Aldoc	Fructose-bisphosphate aldolase C	1	GILAADESVGSMAK	GILAADESVGSMAK	2	GILAADESVGSMAK2	20575.2	9518.78	14127.2
P00884	P00884	ALDOB_RAT	Aldob	Fructose-bisphosphate aldolase B	1	GILAADESVGTMGNR	GILAADESVGTMGNR	2	GILAADESVGTMGNR2	2081.87		3536.73
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	GILAVEQNK	GILAVEQNK	2	GILAVEQNK2	2.44114e+06		3.4907e+06
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	GILAVLDEACSTAGPITDR	GILAVLDEAC(UniMod:4)STAGPITDR	2	GILAVLDEAC(UniMod:4)STAGPITDR2	8425.47	15858	8725.72
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	GILAVLDEACSTAGPITDR	GILAVLDEAC(UniMod:4)STAGPITDR	3	GILAVLDEAC(UniMod:4)STAGPITDR3		6124.7	17245.1
B0BNI6	B0BNI6	B0BNI6_RAT	Slc25a35	Solute carrier family 25, member 35	1	GILDALLQTAR	GILDALLQTAR	2	GILDALLQTAR2	13711.9	7417.95	7386.26
P0C0A9	P0C0A9	SVIP_RAT	Svip	Small VCP/p97-interacting protein	1	GILDIQSVEAK	GILDIQSVEAK	2	GILDIQSVEAK2	4395.28	5264.83	8862.66
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	GILDLNTYNVVK	GILDLNTYNVVK	2	GILDLNTYNVVK2	44027.1	67364.6	65371.4
O55197	O55197	C3AR_RAT	C3ar1	C3a anaphylatoxin chemotactic receptor	1	GILEAAFSEELTHSTSCTQDK	GILEAAFSEELTHSTSC(UniMod:4)TQDK	3	GILEAAFSEELTHSTSC(UniMod:4)TQDK3	9913.9	7459.25	9616.53
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	GILEEQYFELTQESK	GILEEQYFELTQESK	2	GILEEQYFELTQESK2	1401.58	6508.74	4849.89
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	GILEVWSTQQGPR	GILEVWSTQQGPR	2	GILEVWSTQQGPR2	27825.3	31873.3	41114.6
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	GILEYLTVAEVVETMEDLVTYTK	GILEYLTVAEVVETMEDLVTYTK	3	GILEYLTVAEVVETMEDLVTYTK3	6819.32		
A0A8I6A6H8	A0A8I6A6H8	A0A8I6A6H8_RAT	Serpinb6a	Serpin family B member 6A	1	GILFCGR	GILFC(UniMod:4)GR	2	GILFC(UniMod:4)GR2	552525	535927	504854
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	GILFVGSGVSGGEEGAR	GILFVGSGVSGGEEGAR	2	GILFVGSGVSGGEEGAR2	68301.4	48443.7	59672.9
Q68SB1	Q68SB1	STAU2_RAT	Stau2	Double-stranded RNA-binding protein Staufen homolog 2	1	GILHLSPDVYQEMEASR	GILHLSPDVYQEMEASR	3	GILHLSPDVYQEMEASR3	2438.51	2393.82	6158.29
Q6AXR4	Q6AXR4	HEXB_RAT	Hexb	Beta-hexosaminidase subunit beta	1	GILIDTSR	GILIDTSR	2	GILIDTSR2		57378.9	98825.7
A0A0G2K320	A0A0G2K320	A0A0G2K320_RAT	Siglec1	Sialic acid binding Ig like lectin 1	1	GILLCQVDSDPPAQLQLLHK	GILLC(UniMod:4)QVDSDPPAQLQLLHK	3	GILLC(UniMod:4)QVDSDPPAQLQLLHK3	1640.36		
Q641X3	Q641X3	HEXA_RAT	Hexa	Beta-hexosaminidase subunit alpha	1	GILLDTSR	GILLDTSR	2	GILLDTSR2	69426.5		
Q793F9	Q6GX84;A0A8I6GH80;Q793F9	VPS4A_RAT	Vps4a	Vacuolar protein sorting-associated protein 4A	0	GILLFGPPGTGK	GILLFGPPGTGK	2	GILLFGPPGTGK2	94229.6	73128.9	81234.1
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	GILLYGPPGCGK	GILLYGPPGC(UniMod:4)GK	2	GILLYGPPGC(UniMod:4)GK2	66764.8	80677.1	82830.2
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	GILLYGPPGTGK	GILLYGPPGTGK	2	GILLYGPPGTGK2			3.08105e+06
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	GILLYGTK	GILLYGTK	2	GILLYGTK2	40386.9	53511.9	41548.4
Q91XU8	Q91XU8	CDS2_RAT	Cds2	Phosphatidate cytidylyltransferase 2	1	GILMSALEEE	GILMSALEEE	2	GILMSALEEE2	38012.6	37604.5	40467.7
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	GILQCLLWGPR	GILQC(UniMod:4)LLWGPR	2	GILQC(UniMod:4)LLWGPR2	9953.78	8581.72	
Q58NB7	Q58NB7	Q58NB7_RAT	Rarres1	Retinoic acid receptor responder (Tazarotene induced) 1	1	GILQLAAR	GILQLAAR	2	GILQLAAR2	255547	234230	213994
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	GILSGTSDLLLTFDEAEVR	GILSGTSDLLLTFDEAEVR	3	GILSGTSDLLLTFDEAEVR3	33298.9	32313.3	29612.6
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	GILSGTSDLLLTFDEAEVRK	GILSGTSDLLLTFDEAEVRK	3	GILSGTSDLLLTFDEAEVRK3	31315.3	38791.5	33161.8
Q5XIG4	Q5XIG4	OCAD1_RAT	Ociad1	OCIA domain-containing protein 1	1	GILSSHPK	GILSSHPK	2	GILSSHPK2	15363.3		19231.1
P68136	P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	GILTLKYPIEHGIITNWDDMEK	GILTLKYPIEHGIITNWDDMEK	4	GILTLKYPIEHGIITNWDDMEK4	25698.2	14307.2	29311.2
Q66H74	Q66H74	GLP3L_RAT	Golph3l	Golgi phosphoprotein 3-like	1	GILTTEK	GILTTEK	2	GILTTEK2	26562.6	28794.4	32797
A0A8I5ZQE9	A0A8I5ZQE9	A0A8I5ZQE9_RAT	Irf9	Interferon regulatory factor 9	1	GILVASNSR	GILVASNSR	2	GILVASNSR2	16907	24316.7	22318.4
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	GILVFQLK	GILVFQLK	2	GILVFQLK2	20608.1	23885.9	20589.9
A0A0G2K654;M0R7B4	M0R7B4;A0A0G2K654	A0A0G2K654_RAT;M0R7B4_RAT	H1f2;H4f3	H1.2 linker histone, cluster member	0	GILVQTK	GILVQTK	1	GILVQTK1	7051.81	7264.98	7751.58
Q5XIC0	Q5XIC0	ECI2_RAT	Eci2	Enoyl-CoA delta isomerase 2	1	GILVTSEGGITK	GILVTSEGGITK	2	GILVTSEGGITK2	50612.4	52122	47593.4
P00786	P00786	CATH_RAT	Ctsh	Pro-cathepsin H	1	GIMGEDSYPYIGK	GIMGEDSYPYIGK	2	GIMGEDSYPYIGK2		4717.63	
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	GIMINETSAVVYAQLLTGR	GIMINETSAVVYAQLLTGR	3	GIMINETSAVVYAQLLTGR3		2445.13	
Q9WUK5	Q9WUK5	INHBC_RAT	Inhbc	Inhibin beta C chain	1	GINCQGLSR	GINC(UniMod:4)QGLSR	2	GINC(UniMod:4)QGLSR2	17927.4	20744.1	23095
P97694	P97694	CYH1_RAT	Cyth1	Cytohesin-1	1	GINDGGDLPEELLR	GINDGGDLPEELLR	2	GINDGGDLPEELLR2	32690.9	27452	38711.5
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	GINDQGLYR	GINDQGLYR	2	GINDQGLYR2	45514.2	41142.2	51098.8
P63035	P63035	CYH2_RAT	Cyth2	Cytohesin-2	1	GINEGGDLPEDLLR	GINEGGDLPEDLLR	2	GINEGGDLPEDLLR2	3458.09		8796.19
P80067	P80067	CATC_RAT	Ctsc	Dipeptidyl peptidase 1	1	GINFVSPVR	GINFVSPVR	2	GINFVSPVR2	60764.8	46205.4	62942.2
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	GINGIDFK	GINGIDFK	2	GINGIDFK2	15073.8	19651.4	27004.7
P05426	P05426	RL7_RAT	Rpl7	Large ribosomal subunit protein uL30	1	GINGVSPK	GINGVSPK	2	GINGVSPK2	17645.4	21430.8	19478.3
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	GINLPTPPGLSPSDLDAFVR	GINLPTPPGLSPSDLDAFVR	3	GINLPTPPGLSPSDLDAFVR3	15636.6	23454	28721.2
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	GINLSCIR	GINLSC(UniMod:4)IR	2	GINLSC(UniMod:4)IR2	20303.1	19057.5	27247.9
F1LP90	F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	1	GINPADKPAWAR	GINPADKPAWAR	3	GINPADKPAWAR3	13739.2	12961.9	17666.4
F1LUU1	F1LUU1	F1LUU1_RAT	Itga11	Integrin subunit alpha 11	1	GINPETFLNEIK	GINPETFLNEIK	2	GINPETFLNEIK2	16798	14833.4	11694.8
Q63189	Q63189	PRG2_RAT	Prg2	Bone marrow proteoglycan	1	GINQGQVWIGGR	GINQGQVWIGGR	2	GINQGQVWIGGR2	16039.4	14528.3	8705.7
Q810F4	Q810F4	FAM3C_RAT	Fam3c	Protein FAM3C	1	GINVALVNGK	GINVALVNGK	2	GINVALVNGK2	20230.1	16724.9	21678.1
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	GIPAAVPAADLQFALQSLEEIER	GIPAAVPAADLQFALQSLEEIER	3	GIPAAVPAADLQFALQSLEEIER3	34933		6367.14
B0BN63	B0BN63	B0BN63_RAT	Ahsa1	Activator of Hsp90 ATPase activity 1	1	GIPAPEEER	GIPAPEEER	2	GIPAPEEER2	54919.7	39081.5	54848.9
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	GIPDDRDGLFDTIQR	GIPDDRDGLFDTIQR	3	GIPDDRDGLFDTIQR3	145191	158878	138229
P61954	D4AAI1;P61954	GBG11_RAT	Gng11	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11	0	GIPEDKNPFK	GIPEDKNPFK	2	GIPEDKNPFK2	169946	155039	153089
P61954	D4AAI1;P61954	GBG11_RAT	Gng11	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11	0	GIPEDKNPFK	GIPEDKNPFK	3	GIPEDKNPFK3	252070	291819	254098
Q9Z2G8	Q9Z2G8	NP1L1_RAT	Nap1l1	Nucleosome assembly protein 1-like 1	1	GIPEFWLTVFK	GIPEFWLTVFK	2	GIPEFWLTVFK2	162762	156844	191161
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	GIPELEQYDPPELADSSSR	GIPELEQYDPPELADSSSR	3	GIPELEQYDPPELADSSSR3	30480.6	26947.8	34645.9
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	GIPELVLK	GIPELVLK	1	GIPELVLK1	17418.8	16606.9	
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	GIPELVLK	GIPELVLK	2	GIPELVLK2	592839	519966	579377
D3ZZL3	D3ZZL3	D3ZZL3_RAT	Naglu	N-acetyl-alpha-glucosaminidase	1	GIPFQQHQFEK	GIPFQQHQFEK	3	GIPFQQHQFEK3	29468	40487.6	17187.9
P62703	D3ZX01;P62703	RS4X_RAT	Rps4x	Small ribosomal subunit protein eS4	0	GIPHLVTHDAR	GIPHLVTHDAR	2	GIPHLVTHDAR2	27183.7	20291.6	
P62703	D3ZX01;P62703	RS4X_RAT	Rps4x	Small ribosomal subunit protein eS4	0	GIPHLVTHDAR	GIPHLVTHDAR	3	GIPHLVTHDAR3	124427	40728.4	32594.5
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	GIPIGMLVLGNK	GIPIGMLVLGNK	2	GIPIGMLVLGNK2	42591	61223.4	56713.2
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	GIPILVGLLDHPK	GIPILVGLLDHPK	2	GIPILVGLLDHPK2	28528.9	17596	12184.2
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	GIPILVGLLDHPK	GIPILVGLLDHPK	3	GIPILVGLLDHPK3	21791.6	23600.3	13616.8
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	GIPIWCWSCHNGSALLK	GIPIWC(UniMod:4)WSC(UniMod:4)HNGSALLK	3	GIPIWC(UniMod:4)WSC(UniMod:4)HNGSALLK3	20836.8	17517.4	13083
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GIPLDPNDK	GIPLDPNDK	2	GIPLDPNDK2	590036	832794	749605
Q5RK09	Q5RK09	EIF3G_RAT	Eif3g	Eukaryotic translation initiation factor 3 subunit G	1	GIPLPTGDTSPEPELLPGDPLPPPK	GIPLPTGDTSPEPELLPGDPLPPPK	3	GIPLPTGDTSPEPELLPGDPLPPPK3	102684	109852	112554
D3ZRB3	D3ZRB3	D3ZRB3_RAT	Rhof	Ras homolog family member F, filopodia associated	1	GIPMVLIGCK	GIPMVLIGC(UniMod:4)K	2	GIPMVLIGC(UniMod:4)K2	188292	152372	142583
Q7TQ16	Q7TQ16	QCR8_RAT	Uqcrq	Cytochrome b-c1 complex subunit 8	1	GIPNVLR	GIPNVLR	2	GIPNVLR2	317189	291888	292940
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	GIPQLEGQK	GIPQLEGQK	2	GIPQLEGQK2	90523.9	85582.6	73564.6
A0A8I5ZVT2	A0A8I5ZVT2	A0A8I5ZVT2_RAT	Fndc3a	Fibronectin type III domain containing 3a	1	GIPSEAESFTTLSCEPDTPNAPR	GIPSEAESFTTLSC(UniMod:4)EPDTPNAPR	3	GIPSEAESFTTLSC(UniMod:4)EPDTPNAPR3	3850.44	5162.63	4719.51
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	GIPVFTEDR	GIPVFTEDR	2	GIPVFTEDR2	9124.69	24313.5	
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	GIPVFTEDRDR	GIPVFTEDRDR	2	GIPVFTEDRDR2	5436.92	8314.16	
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	GIPVFTEDRDR	GIPVFTEDRDR	3	GIPVFTEDRDR3	126559	125646	159314
D3Z841	D3Z841	D3Z841_RAT	Btnl10	Butyrophilin like 10	1	GIQAECTSAGWYPEPK	GIQAEC(UniMod:4)TSAGWYPEPK	2	GIQAEC(UniMod:4)TSAGWYPEPK2	733.811		1504.77
Q641X3	Q641X3	HEXA_RAT	Hexa	Beta-hexosaminidase subunit alpha	1	GIQAQPISVGYCEQEFEHT	GIQAQPISVGYC(UniMod:4)EQEFEHT	3	GIQAQPISVGYC(UniMod:4)EQEFEHT3	5114.77	4093.24	4214
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	GIQDVYVLSEQQGLLLK	GIQDVYVLSEQQGLLLK	2	GIQDVYVLSEQQGLLLK2	82326.2	59800.1	90166.4
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	GIQDVYVLSEQQGLLLK	GIQDVYVLSEQQGLLLK	3	GIQDVYVLSEQQGLLLK3	15162.6	16690.9	18245.7
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	GIQEAQVQLQK	GIQEAQVQLQK	2	GIQEAQVQLQK2	13552.1	53205.6	28147
P47942	P47942	DPYL2_RAT	Dpysl2	Dihydropyrimidinase-related protein 2	1	GIQEEMEALVK	GIQEEMEALVK	2	GIQEEMEALVK2	4347.41	3534.32	
P63035	P63035	CYH2_RAT	Cyth2	Cytohesin-2	1	GIQFLVEHELLQNTPEEIAR	GIQFLVEHELLQNTPEEIAR	3	GIQFLVEHELLQNTPEEIAR3	3335.52	8774.28	5988.47
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	GIQLTSEELGLPPLYPSR	GIQLTSEELGLPPLYPSR	3	GIQLTSEELGLPPLYPSR3			19209.7
G3V996	G3V996	G3V996_RAT	Letmd1	LETM1 domain containing 1	1	GIQMLWADAK	GIQMLWADAK	2	GIQMLWADAK2	6217.73		4122.58
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	GIQNDLTK	GIQNDLTK	1	GIQNDLTK1	32055.9	24008	23561.7
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	GIQNDLTK	GIQNDLTK	2	GIQNDLTK2	4.56742e+06	5.14301e+06	5.36369e+06
Q6P9U3	Q6P9U3	COMD3_RAT	Commd3	COMM domain-containing protein 3	1	GIQTLADPGSFDSSAFALLLR	GIQTLADPGSFDSSAFALLLR	3	GIQTLADPGSFDSSAFALLLR3		1922.58	2059.91
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	GIQVDIYSFPK	GIQVDIYSFPK	2	GIQVDIYSFPK2	55475.6	49913	47417.2
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	GIQVDIYSFPKDPEIQFSGPLEVGKPVMVK	GIQVDIYSFPKDPEIQFSGPLEVGKPVMVK	4	GIQVDIYSFPKDPEIQFSGPLEVGKPVMVK4	32833.8	39244.9	37848.8
A0A8I5Y9U2	A0A8I5Y9U2	A0A8I5Y9U2_RAT	Cnot2	CCR4-NOT transcription complex, subunit 2	1	GIQVLPDGR	GIQVLPDGR	2	GIQVLPDGR2	4340.95	8348.6	3374.24
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	GIQVSNDGPCLGSR	GIQVSNDGPC(UniMod:4)LGSR	2	GIQVSNDGPC(UniMod:4)LGSR2	23258.7	28413.8	21502.6
Q9JL55	Q9JL55	GDE1_RAT	Gde1	Glycerophosphodiester phosphodiesterase 1	1	GIQVVSWTVNTFDEK	GIQVVSWTVNTFDEK	2	GIQVVSWTVNTFDEK2	14253.4	20121.7	17403.2
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	GIRDNER	GIRDNER	2	GIRDNER2			24633.9
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	GIRPAINVGLSVSR	GIRPAINVGLSVSR	3	GIRPAINVGLSVSR3	843169	784055	765883
B1WBY5	B1WBY5	B1WBY5_RAT	Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	1	GIRPGLTTVLAR	GIRPGLTTVLAR	3	GIRPGLTTVLAR3	17578.6	24499.7	27763.5
D3ZRJ7	D3ZRJ7	D3ZRJ7_RAT	Lrrk1	non-specific serine/threonine protein kinase	1	GIRPVLGQPEEVQFYR	GIRPVLGQPEEVQFYR	3	GIRPVLGQPEEVQFYR3	6582.44	3243.1	4242.75
D4ADT7	D4ADT7	D4ADT7_RAT	Nod1	Nucleotide-binding oligomerization domain containing 1	1	GISADYLK	GISADYLK	2	GISADYLK2	15715.3	12371.8	
Q9JKC9	Q9JKC9	SYNRG_RAT	Synrg	Synergin gamma	1	GISAEKPSENPASFGESGDK	GISAEKPSENPASFGESGDK	3	GISAEKPSENPASFGESGDK3	5602.6	9307.51	7692.01
P15651	P15651	ACADS_RAT	Acads	Short-chain specific acyl-CoA dehydrogenase, mitochondrial	1	GISAFLVPMPTPGLTLGK	GISAFLVPMPTPGLTLGK	2	GISAFLVPMPTPGLTLGK2	8326.36	8286.37	10921.1
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	GISALQGEMK	GISALQGEMK	2	GISALQGEMK2	48539.2	55298.2	48250.4
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	GISCLVDAFLGISRPR	GISC(UniMod:4)LVDAFLGISRPR	3	GISC(UniMod:4)LVDAFLGISRPR3	8275.31	10167.9	17250.1
F7EPH4	F7EPH4	F7EPH4_RAT	Ppa1	inorganic diphosphatase	1	GISCMNTTVSESPFK	GISC(UniMod:4)MNTTVSESPFK	2	GISC(UniMod:4)MNTTVSESPFK2	7055.48	12629.4	10887.6
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	GISCPFLDGLYITEPK	GISC(UniMod:4)PFLDGLYITEPK	2	GISC(UniMod:4)PFLDGLYITEPK2	78854.1	61172.7	74045.3
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	GISCPFLDGLYITEPK	GISC(UniMod:4)PFLDGLYITEPK	3	GISC(UniMod:4)PFLDGLYITEPK3	3833.57	8154.49	5204.44
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	GISDLAQHYLMR	GISDLAQHYLMR	2	GISDLAQHYLMR2	31288.7	24673.1	15520.7
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	GISDLAQHYLMR	GISDLAQHYLMR	3	GISDLAQHYLMR3	491244	536555	531701
D4A020	A0A8I6A2B8;D4A020	D4A020_RAT	Med14	Mediator of RNA polymerase II transcription subunit 14	0	GISEETQK	GISEETQK	1	GISEETQK1	2017.61		861.914
P10760	P10760	SAHH_RAT	Ahcy	Adenosylhomocysteinase	1	GISEETTTGVHNLYK	GISEETTTGVHNLYK	2	GISEETTTGVHNLYK2	1855.7		
P10760	P10760	SAHH_RAT	Ahcy	Adenosylhomocysteinase	1	GISEETTTGVHNLYK	GISEETTTGVHNLYK	3	GISEETTTGVHNLYK3	29394.5	24494.6	15949.4
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	GISEVLAR	GISEVLAR	2	GISEVLAR2	53201.2	61695.9	58547
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	GISFIFCCFR	GISFIFC(UniMod:4)C(UniMod:4)FR	2	GISFIFC(UniMod:4)C(UniMod:4)FR2	8624.4	3535.15	3536.29
Q62867	Q62867	GGH_RAT	Ggh	Gamma-glutamyl hydrolase	1	GISHAPNAVK	GISHAPNAVK	2	GISHAPNAVK2	3907.79		
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	GISHASSSIVSLAR	GISHASSSIVSLAR	2	GISHASSSIVSLAR2	6846.46	7046.81	2773.3
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	GISHASSSIVSLAR	GISHASSSIVSLAR	3	GISHASSSIVSLAR3	33703.3	29855.9	30883.1
D3ZP12	D3ZP12	D3ZP12_RAT	Zc3h7a	Zinc finger CCCH type containing 7 A	1	GISHDDIAQQSR	GISHDDIAQQSR	3	GISHDDIAQQSR3		5253.07	7911.16
A0A8I6ABZ7	A0A8I6ABZ7	A0A8I6ABZ7_RAT	Dhx9	RNA helicase	1	GISHVIVDEIHER	GISHVIVDEIHER	3	GISHVIVDEIHER3	10848.1	1506.39	
E9PT90	E9PT90	E9PT90_RAT	Spart	Spartin	1	GISIAAAEPGHTGPAWEAAR	GISIAAAEPGHTGPAWEAAR	3	GISIAAAEPGHTGPAWEAAR3	47809.7	35423.7	68363.5
Q63396	Q63396;A0A8I6AUU4	TCP4_RAT	Sub1	Activated RNA polymerase II transcriptional coactivator p15	0	GISLNMEQWSQLK	GISLNMEQWSQLK	2	GISLNMEQWSQLK2	8010.99	13997.9	11934
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	GISMGTPK	GISMGTPK	2	GISMGTPK2	46339.8	54708.6	49634.7
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	GISMSSSK	GISMSSSK	1	GISMSSSK1	51854.5	44961.8	10072.7
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	GISMSSSK	GISMSSSK	2	GISMSSSK2	3.4414e+06	2.09537e+06	4.46315e+06
G3V8G2	G3V8G2	G3V8G2_RAT	Psmd5	26S proteasome non-ATPase regulatory subunit 5	1	GISNQPFPELHCAALK	GISNQPFPELHC(UniMod:4)AALK	2	GISNQPFPELHC(UniMod:4)AALK2	4794.89	1235.37	3979.59
G3V8G2	G3V8G2	G3V8G2_RAT	Psmd5	26S proteasome non-ATPase regulatory subunit 5	1	GISNQPFPELHCAALK	GISNQPFPELHC(UniMod:4)AALK	3	GISNQPFPELHC(UniMod:4)AALK3	49100.9	53929.5	51822.1
P39052	P39052;P21575	DYN2_RAT	Dnm2	Dynamin-2	0	GISPVPINLR	GISPVPINLR	2	GISPVPINLR2	275254	236622	260742
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	GISQEQMNEFR	GISQEQMNEFR	2	GISQEQMNEFR2	2.42916e+06	2.72487e+06	2.90346e+06
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	GISQEQMNEFR	GISQEQMNEFR	3	GISQEQMNEFR3	11676.8	11806.7	10213.7
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	GISQEQMQEFR	GISQEQMQEFR	2	GISQEQMQEFR2	476606	561027	536946
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	GISQMPLR	GISQMPLR	2	GISQMPLR2	83372.3	73200.9	73008.1
D4A8F2	D4A8F2	D4A8F2_RAT	Rsu1	Ras suppressor protein 1	1	GISSMLDVNGLFSLAHITQLVLSHNK	GISSMLDVNGLFSLAHITQLVLSHNK	4	GISSMLDVNGLFSLAHITQLVLSHNK4		24305.4	8385.44
A0A8I6GLU8	A0A8I6GLU8	A0A8I6GLU8_RAT	Tardbp	TAR DNA-binding protein 43	1	GISVHISNAEPK	GISVHISNAEPK	3	GISVHISNAEPK3	48666	45119.8	50757.2
P12007	P12007	IVD_RAT	Ivd	Isovaleryl-CoA dehydrogenase, mitochondrial	1	GITAFIVEK	GITAFIVEK	2	GITAFIVEK2	12613.5	13732.5	12316.2
E9PST5	E9PST5	E9PST5_RAT	Acin1	Apoptotic chromatin condensation inducer 1	1	GITEESVK	GITEESVK	2	GITEESVK2	18260.1	6338.59	8745.87
F1LYX9	F1LYX9	F1LYX9_RAT	Dsg2	Desmoglein 2	1	GITEPPFGIFVFDR	GITEPPFGIFVFDR	2	GITEPPFGIFVFDR2	30811	29579.5	24889
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	GITFDSGGISIK	GITFDSGGISIK	2	GITFDSGGISIK2	75569.3	57749.7	51217.4
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	GITFEDVR	GITFEDVR	2	GITFEDVR2	145477	147649	156192
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	GITGIEDK	GITGIEDK	2	GITGIEDK2	88515.5	80801.1	97252
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	GITGIEDKEAWHGKPLPK	GITGIEDKEAWHGKPLPK	4	GITGIEDKEAWHGKPLPK4	17692.5	11149.9	7418.59
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	GITGVDLFGTTDAVVK	GITGVDLFGTTDAVVK	2	GITGVDLFGTTDAVVK2	244555	241366	285572
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	GITHIGYTDLPSR	GITHIGYTDLPSR	2	GITHIGYTDLPSR2	16555.6	10409.2	6591.43
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	GITHIGYTDLPSR	GITHIGYTDLPSR	3	GITHIGYTDLPSR3	269837	248123	256865
F7FI79	F7FI79	F7FI79_RAT	Fhip2b	FHF complex subunit HOOK interacting protein 2B	1	GITHYYIESTDENTPAK	GITHYYIESTDENTPAK	3	GITHYYIESTDENTPAK3	1774.46	7185.93	3235.57
F7FI79	F7FI79	F7FI79_RAT	Fhip2b	FHF complex subunit HOOK interacting protein 2B	1	GITHYYIESTDENTPAKK	GITHYYIESTDENTPAKK	4	GITHYYIESTDENTPAKK4	3176.21	2252.73	3136.35
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	GITINAAHVEYSTAAR	GITINAAHVEYSTAAR	2	GITINAAHVEYSTAAR2	5535.52	5493.3	2753.82
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	GITINAAHVEYSTAAR	GITINAAHVEYSTAAR	3	GITINAAHVEYSTAAR3	157409	148360	153500
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	GITLHDEPVDWAAAGDHVSLTLVGMDIIK	GITLHDEPVDWAAAGDHVSLTLVGMDIIK	4	GITLHDEPVDWAAAGDHVSLTLVGMDIIK4	7954.35	4227.09	7840.22
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	GITMATAK	GITMATAK	1	GITMATAK1	66378.9	33055.3	31615.6
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	GITMATAK	GITMATAK	2	GITMATAK2	3.17794e+06	3.25297e+06	3.41552e+06
P20786	P20786	PGFRA_RAT	Pdgfra	Platelet-derived growth factor receptor alpha	1	GITMLEEIK	GITMLEEIK	2	GITMLEEIK2	26428.5	16702.5	13636.3
P20786	P20786	PGFRA_RAT	Pdgfra	Platelet-derived growth factor receptor alpha	1	GITMLEEIKLPSIK	GITMLEEIKLPSIK	3	GITMLEEIKLPSIK3	69023	58027.6	61128.1
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	GITPNFMK	GITPNFMK	1	GITPNFMK1	8876.76	3300.29	9498.64
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	GITPNFMK	GITPNFMK	2	GITPNFMK2	222432	174199	161390
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	GITQSALDYMK	GITQSALDYMK	2	GITQSALDYMK2	54921.2	60052.4	49914.2
A0A8I6AI41	A0A8I6AI41	A0A8I6AI41_RAT	ENSRNOG00000066406	Ig-like domain-containing protein	1	GITSLYWYLQR	GITSLYWYLQR	2	GITSLYWYLQR2	10676.6	3273.57	10965.8
A0A8I6AI41	A0A8I6AI41	A0A8I6AI41_RAT	ENSRNOG00000066406	Ig-like domain-containing protein	1	GITSLYWYLQRPGK	GITSLYWYLQRPGK	2	GITSLYWYLQRPGK2	11393.2	6362.24	
A0A8I6AI41	A0A8I6AI41	A0A8I6AI41_RAT	ENSRNOG00000066406	Ig-like domain-containing protein	1	GITSLYWYLQRPGK	GITSLYWYLQRPGK	3	GITSLYWYLQRPGK3	39761.1	60363.6	35127.5
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	GITSRPEPPSAAILVVYLDR	GITSRPEPPSAAILVVYLDR	3	GITSRPEPPSAAILVVYLDR3	349560	367640	362775
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	GITSRPEPPSAAILVVYLDR	GITSRPEPPSAAILVVYLDR	4	GITSRPEPPSAAILVVYLDR4	8259.87	5094.81	8343.06
P62898	D4A5L9;P62898	CYC_RAT	Cycs	Cytochrome c, somatic	0	GITWGEDTLMEYLENPK	GITWGEDTLMEYLENPK	3	GITWGEDTLMEYLENPK3	78535.5	87589.8	66930.1
P62898	D4A5L9;P62898	CYC_RAT	Cycs	Cytochrome c, somatic	0	GITWGEDTLMEYLENPKK	GITWGEDTLMEYLENPKK	3	GITWGEDTLMEYLENPKK3	66811.5	49030	61709.5
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	GIVAAFYSHPR	GIVAAFYSHPR	2	GIVAAFYSHPR2	853285	788777	781889
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	GIVAAFYSHPR	GIVAAFYSHPR	3	GIVAAFYSHPR3	25747.9	31954.5	18974.8
B2GV22	B2GV22	PTSS2_RAT	Ptdss2	Phosphatidylserine synthase 2	1	GIVASILVFLCFGVTQAK	GIVASILVFLC(UniMod:4)FGVTQAK	2	GIVASILVFLC(UniMod:4)FGVTQAK2	7597.72	5027.12	
P63102	P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	1	GIVDQSQQAYQEAFEISK	GIVDQSQQAYQEAFEISK	3	GIVDQSQQAYQEAFEISK3	1.11524e+06	1.18185e+06	1.27127e+06
P63102	P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	1	GIVDQSQQAYQEAFEISKK	GIVDQSQQAYQEAFEISKK	3	GIVDQSQQAYQEAFEISKK3	827681	1.02819e+06	1.08866e+06
P63102	P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	1	GIVDQSQQAYQEAFEISKK	GIVDQSQQAYQEAFEISKK	4	GIVDQSQQAYQEAFEISKK4	9627.69	7141.57	12258.2
B5DFN2	D3ZWL6;B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	0	GIVEESVTGVHR	GIVEESVTGVHR	2	GIVEESVTGVHR2	24633.4	16489.2	29736.8
B5DFN2	D3ZWL6;B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	0	GIVEESVTGVHR	GIVEESVTGVHR	3	GIVEESVTGVHR3	198310	205179	190364
P51111	P51111	HD_RAT	Htt	Huntingtin	1	GIVEQEIQEMVSQR	GIVEQEIQEMVSQR	2	GIVEQEIQEMVSQR2	24655.8	34323.6	31186.7
P51111	P51111	HD_RAT	Htt	Huntingtin	1	GIVEQEIQEMVSQR	GIVEQEIQEMVSQR	3	GIVEQEIQEMVSQR3	26566.2	34906.8	32356.2
F7F5P9	F7F5P9	F7F5P9_RAT	G3bp2	G3BP stress granule assembly factor 2	1	GIVGGGMMR	GIVGGGMMR	2	GIVGGGMMR2	83954.8	92482.3	91363
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	GIVGHVAAFGEPLNIK	GIVGHVAAFGEPLNIK	2	GIVGHVAAFGEPLNIK2	102743	100541	102109
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	GIVGHVAAFGEPLNIK	GIVGHVAAFGEPLNIK	3	GIVGHVAAFGEPLNIK3	904891	898080	928450
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	GIVGVENVAELK	GIVGVENVAELK	2	GIVGVENVAELK2	43039.4	42401.1	39870.2
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	GIVGVENVAELKK	GIVGVENVAELKK	2	GIVGVENVAELKK2	3257.8	2098.62	4669.9
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	GIVGVENVAELKK	GIVGVENVAELKK	3	GIVGVENVAELKK3	137219	91722.8	89585.5
Q6PDU7	Q6PDU7;A0A8I6AAI9	ATP5L_RAT	Atp5mg	ATP synthase subunit g, mitochondrial	0	GIVGYDV	GIVGYDV	1	GIVGYDV1	95540.5	88480.3	101270
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	GIVIGTGENSEFGEVFK	GIVIGTGENSEFGEVFK	2	GIVIGTGENSEFGEVFK2	45127.1	31812.8	52483.8
P84817	P84817	FIS1_RAT	Fis1	Mitochondrial fission 1 protein	1	GIVLLEELLPK	GIVLLEELLPK	2	GIVLLEELLPK2	64788.1	48465.9	53535.5
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	GIVNEQFLLQR	GIVNEQFLLQR	2	GIVNEQFLLQR2	17378.3	15046.4	14547.5
A0A8I6ABN1	A0A8I6ABN1	A0A8I6ABN1_RAT	Snx19	Sorting nexin 19	1	GIVNLILK	GIVNLILK	2	GIVNLILK2	10512.4	7960.89	8482.76
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	GIVQSEEK	GIVQSEEK	2	GIVQSEEK2	43444.5		37017.5
Q5XIA4	Q5XIA4	CNO10_RAT	Cnot10	CCR4-NOT transcription complex subunit 10	1	GIVQSIVGQGYHR	GIVQSIVGQGYHR	3	GIVQSIVGQGYHR3	2027.56	2576.01	3217.28
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	GIVQYLQK	GIVQYLQK	2	GIVQYLQK2	25799.3	15575.1	21012
D4ABL6	D4ABL6	MCTP1_RAT	Mctp1	Multiple C2 and transmembrane domain-containing protein 1	1	GIVSITLIEGR	GIVSITLIEGR	2	GIVSITLIEGR2	3846.19	3542.86	
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	GIVTDGHSGCTPCSCDPR	GIVTDGHSGC(UniMod:4)TPC(UniMod:4)SC(UniMod:4)DPR	3	GIVTDGHSGC(UniMod:4)TPC(UniMod:4)SC(UniMod:4)DPR3	16223.4	12181	17174.6
Q09325	Q09325	MGAT1_RAT	Mgat1	Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	1	GIVTFQFR	GIVTFQFR	2	GIVTFQFR2	11206.6	4300.12	8385.01
F1LU71	F1LU71	AUHM_RAT	Auh	Methylglutaconyl-CoA hydratase, mitochondrial	1	GIVVLGINR	GIVVLGINR	2	GIVVLGINR2	222204	222837	218328
P23377	P23377	FURIN_RAT	Furin	Furin	1	GIVVSILDDGIEK	GIVVSILDDGIEK	2	GIVVSILDDGIEK2	11829	26881.1	21510.1
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	GIVVYTGDR	GIVVYTGDR	2	GIVVYTGDR2	118263	121600	116594
D4A3E2	D4A3E2	D4A3E2_RAT	Npepl1	Aminopeptidase-like 1	1	GIVYDTGGLSIK	GIVYDTGGLSIK	2	GIVYDTGGLSIK2	22068	21674.2	19488.8
Q9JHX4	Q9JHX4	CASP8_RAT	Casp8	Caspase-8	1	GIVYGTDGK	GIVYGTDGK	2	GIVYGTDGK2	9140.97	9021.5	5296.55
Q7TNJ2	Q7TNJ2;A0A8I5ZLK5	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	0	GIWELLLK	GIWELLLK	2	GIWELLLK2	26701.8	8283.46	15053.4
P07335	P07335;P00564	KCRB_RAT	Ckb	Creatine kinase B-type	0	GIWHNDNK	GIWHNDNK	2	GIWHNDNK2	23056.8	26296.9	21479.6
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	GIWLEAGK	GIWLEAGK	1	GIWLEAGK1	41124.2	33787.7	37061.2
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	GIWLEAGK	GIWLEAGK	2	GIWLEAGK2	3.11046e+06	3.04869e+06	3.28161e+06
Q63663	Q63663	GBP2_RAT	Gbp2	Guanylate-binding protein 2	1	GIWMWCVPHPK	GIWMWC(UniMod:4)VPHPK	3	GIWMWC(UniMod:4)VPHPK3	19121.7	18288.7	22252.8
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	GIYALAAR	GIYALAAR	2	GIYALAAR2	566195	619812	580465
Q5RKI1	A0A8I6AI42;Q3B8Q2;Q5RKI1;Q6P3V8	IF4A2_RAT	Eif4a2	Eukaryotic initiation factor 4A-II	0	GIYAYGFEKPSAIQQR	GIYAYGFEKPSAIQQR	2	GIYAYGFEKPSAIQQR2	8583.76		6597.78
Q5RKI1	A0A8I6AI42;Q3B8Q2;Q5RKI1;Q6P3V8	IF4A2_RAT	Eif4a2	Eukaryotic initiation factor 4A-II	0	GIYAYGFEKPSAIQQR	GIYAYGFEKPSAIQQR	3	GIYAYGFEKPSAIQQR3	157012	113065	122841
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	GIYIIQAPK	GIYIIQAPK	2	GIYIIQAPK2	9034.69	6880.29	4096.16
A0A8J8YNE4	A0A8J8YNE4	A0A8J8YNE4_RAT	Apool	MICOS complex subunit	1	GIYLFMK	GIYLFMK	2	GIYLFMK2	13605	28810.5	15917.4
P04182	P04182	OAT_RAT	Oat	Ornithine aminotransferase, mitochondrial	1	GIYMWDVEGR	GIYMWDVEGR	2	GIYMWDVEGR2	5952.61	5578.73	3944.38
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	GIYNNIK	GIYNNIK	2	GIYNNIK2	68084.9	72829.9	57356.3
P30427	P30427	PLEC_RAT	Plec	Plectin	1	GIYQSLEGAVQAGQLK	GIYQSLEGAVQAGQLK	2	GIYQSLEGAVQAGQLK2	1251.03	1975.92	
P98087	P98087	CBLN2_RAT	Cbln2	Cerebellin-2	1	GIYSFSFHVVK	GIYSFSFHVVK	3	GIYSFSFHVVK3	7272.32	3412.32	5314.28
Q9EQT5	Q9EQT5	TINAL_RAT	Tinagl1	Tubulointerstitial nephritis antigen-like	1	GIYSHTPVSQGRPEQYR	GIYSHTPVSQGRPEQYR	3	GIYSHTPVSQGRPEQYR3	15368.2	23557	21124
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	GIYTCTPQGIWK	GIYTC(UniMod:4)TPQGIWK	2	GIYTC(UniMod:4)TPQGIWK2	962727	714626	616065
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	GIYTCTPQGIWK	GIYTC(UniMod:4)TPQGIWK	3	GIYTC(UniMod:4)TPQGIWK3	40646.8	16530.5	18494.4
P97700	P97700	M2OM_RAT	Slc25a11	Mitochondrial 2-oxoglutarate/malate carrier protein	1	GIYTGLSAGLLR	GIYTGLSAGLLR	2	GIYTGLSAGLLR2	51048.1	65781.7	46230.6
Q3ZU82	Q3ZU82	GOGA5_RAT	Golga5	Golgin subfamily A member 5	1	GKAPVLPSSQSSAVSSVTTSVTTIK	GKAPVLPSSQSSAVSSVTTSVTTIK	3	GKAPVLPSSQSSAVSSVTTSVTTIK3	2744.76	2567.19	
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	GKCTYHDLPMK	GKC(UniMod:4)TYHDLPMK	3	GKC(UniMod:4)TYHDLPMK3	2888.87		4791.64
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	GKDCAVIVTQK	GKDC(UniMod:4)AVIVTQK	3	GKDC(UniMod:4)AVIVTQK3	2568.62	4852.26	3758.87
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	GKDLIGVQNLLK	GKDLIGVQNLLK	2	GKDLIGVQNLLK2	16271.2	18411.6	15150.1
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	GKDLIGVQNLLK	GKDLIGVQNLLK	3	GKDLIGVQNLLK3	38306.7	43864.9	63822.7
B2RYI0	B2RYI0	WDR91_RAT	Wdr91	WD repeat-containing protein 91	1	GKDPVPGAK	GKDPVPGAK	2	GKDPVPGAK2	5679.14		
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	GKEADESLKEASLNK	GKEADESLKEASLNK	4	GKEADESLKEASLNK4	1394.09	6968.35	5986.65
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	GKEDEGEEAASPMLQIQR	GKEDEGEEAASPMLQIQR	3	GKEDEGEEAASPMLQIQR3	8281.14	9597.99	4860.08
A0A8J8XD91	A0A8J8XD91	A0A8J8XD91_RAT	Timm17b	Translocase of inner mitochondrial membrane 17b	1	GKEDPWNSITSGALTGAVLAAR	GKEDPWNSITSGALTGAVLAAR	3	GKEDPWNSITSGALTGAVLAAR3	2358.31	2976.55	
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	GKEEEFDFDVAEDLGPLQFVK	GKEEEFDFDVAEDLGPLQFVK	3	GKEEEFDFDVAEDLGPLQFVK3	14048.8	12263.6	12610.5
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	GKEHDDIFDK	GKEHDDIFDK	3	GKEHDDIFDK3	34051.2	38421.5	28372.2
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	GKEHEHLAVAYSTGR	GKEHEHLAVAYSTGR	3	GKEHEHLAVAYSTGR3		2340.64	
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	GKEHEHLAVAYSTGR	GKEHEHLAVAYSTGR	4	GKEHEHLAVAYSTGR4		26470	
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	GKEIVLSAGSTPK	GKEIVLSAGSTPK	2	GKEIVLSAGSTPK2	4761.51	4696.69	6149.93
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	GKEIVLSAGSTPK	GKEIVLSAGSTPK	3	GKEIVLSAGSTPK3	33496.6	52619.6	53950.6
A0A8I5ZY29	A0A8I5ZY29	A0A8I5ZY29_RAT	Usp14	Ubiquitin carboxyl-terminal hydrolase	1	GKENQLQLSCFINQEVK	GKENQLQLSC(UniMod:4)FINQEVK	3	GKENQLQLSC(UniMod:4)FINQEVK3		3528.83	
A0A0G2K2G7	A0A0G2K2G7	A0A0G2K2G7_RAT	Anks1a	Ankyrin repeat and sterile alpha motif domain containing 1A	1	GKEQELLEAAR	GKEQELLEAAR	3	GKEQELLEAAR3	2883.22	1406.56	
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	GKETEYQALQETNMK	GKETEYQALQETNMK	3	GKETEYQALQETNMK3	1661.2	4222.11	4619.83
P15978	P15978	HA11_RAT	RT1-Aw2	Class I histocompatibility antigen, Non-RT1.A alpha-1 chain	1	GKETLLR	GKETLLR	2	GKETLLR2	15676.6	14992.1	15733.3
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	GKEVDNFVDK	GKEVDNFVDK	2	GKEVDNFVDK2	12574.9	8275.39	11444
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	GKEVDNFVDK	GKEVDNFVDK	3	GKEVDNFVDK3	32973.4	31386.7	39740.4
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	GKEVDNFVDKLK	GKEVDNFVDKLK	3	GKEVDNFVDKLK3	23770.3	26954.2	28219
D3ZCG1	D3ZCG1	D3ZCG1_RAT	Dipk2b	Divergent protein kinase domain 2B	1	GKFPSPVQQEIDSALSLCSK	GKFPSPVQQEIDSALSLC(UniMod:4)SK	3	GKFPSPVQQEIDSALSLC(UniMod:4)SK3	7111.48	3295.46	3811.86
P01026	P01026	CO3_RAT	C3	Complement C3	1	GKGQGTLSVVTVYHAK	GKGQGTLSVVTVYHAK	3	GKGQGTLSVVTVYHAK3	12175.8		5526
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	GKKPTEDPANDTVDFPK	GKKPTEDPANDTVDFPK	3	GKKPTEDPANDTVDFPK3	4589.88	3693.01	6670.79
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	GKKPTEDPANDTVDFPK	GKKPTEDPANDTVDFPK	4	GKKPTEDPANDTVDFPK4	6635.68	9200.53	5824.68
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	GKLLIGTVFHR	GKLLIGTVFHR	3	GKLLIGTVFHR3	6888.93	7083.21	5332.8
B5DF93	B5DF93	PATL1_RAT	Patl1	Protein PAT1 homolog 1	1	GKLPGQERPSDDHFVQIMCIR	GKLPGQERPSDDHFVQIMC(UniMod:4)IR	4	GKLPGQERPSDDHFVQIMC(UniMod:4)IR4	5304.74	5616.76	
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	GKLPIVNESDELVAIIAR	GKLPIVNESDELVAIIAR	3	GKLPIVNESDELVAIIAR3	11853.8	6899.33	3193.92
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	GKPANQLLALR	GKPANQLLALR	3	GKPANQLLALR3	16939.9		16396.3
P20069	P20069	MPPA_RAT	Pmpca	Mitochondrial-processing peptidase subunit alpha	1	GKPAVAALGDLTDLPTYEHIQAALSSR	GKPAVAALGDLTDLPTYEHIQAALSSR	3	GKPAVAALGDLTDLPTYEHIQAALSSR3	4948.87	5390.87	
P20069	P20069	MPPA_RAT	Pmpca	Mitochondrial-processing peptidase subunit alpha	1	GKPAVAALGDLTDLPTYEHIQAALSSR	GKPAVAALGDLTDLPTYEHIQAALSSR	4	GKPAVAALGDLTDLPTYEHIQAALSSR4	46823.2	33868.9	30053.1
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	GKPDVVVK	GKPDVVVK	2	GKPDVVVK2	322443	254135	259960
A0A0G2K7M1	A0A0G2K7M1;A0A8I6A1X7	A0A0G2K7M1_RAT	AABR07030729.1	Glyceraldehyde-3-phosphate dehydrogenase	0	GKPITIFQER	GKPITIFQER	3	GKPITIFQER3	7384.51	10146.5	5972.49
A0A0G2K7M1	A0A0G2K7M1;A0A8I6A1X7	A0A0G2K7M1_RAT	AABR07030729.1	Glyceraldehyde-3-phosphate dehydrogenase	0	GKPITIFQERDPANIK	GKPITIFQERDPANIK	4	GKPITIFQERDPANIK4	17448.2	12567.5	12268.4
P20788	P20788	UCRI_RAT	Uqcrfs1	Cytochrome b-c1 complex subunit Rieske, mitochondrial	1	GKPLFVR	GKPLFVR	2	GKPLFVR2	276381	226093	192834
Q6MGB4	Q6MGB4	S39A7_RAT	Slc39a7	Zinc transporter SLC39A7	1	GKPSSEDEKEAGGLR	GKPSSEDEKEAGGLR	3	GKPSSEDEKEAGGLR3	5885.71		
Q6MGB4	Q6MGB4	S39A7_RAT	Slc39a7	Zinc transporter SLC39A7	1	GKPSSEDEKEAGGLR	GKPSSEDEKEAGGLR	4	GKPSSEDEKEAGGLR4	15810.6		17304.3
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	GKPVPVHGSR	GKPVPVHGSR	2	GKPVPVHGSR2			10431.9
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	GKPYLTLEQLMDFINQK	GKPYLTLEQLMDFINQK	3	GKPYLTLEQLMDFINQK3	16047.3	29764.6	29420.4
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	GKSPQTPELVEALAFR	GKSPQTPELVEALAFR	3	GKSPQTPELVEALAFR3	6909.03	10433.5	5676.69
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	GKSPTVVCSLCK	GKSPTVVC(UniMod:4)SLC(UniMod:4)K	3	GKSPTVVC(UniMod:4)SLC(UniMod:4)K3	4597.98	6557.14	5965.5
Q6PEC4	Q6PEC4	SKP1_RAT	Skp1	S-phase kinase-associated protein 1	1	GKTPEEIR	GKTPEEIR	2	GKTPEEIR2	35276	3169.12	30159.6
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	GKTPVDSNDLGPLPPGWEER	GKTPVDSNDLGPLPPGWEER	3	GKTPVDSNDLGPLPPGWEER3	273299	357151	292328
Q6AYE2	Q6AYE2	SHLB1_RAT	Sh3glb1	Endophilin-B1	1	GKVPITYLELLN	GKVPITYLELLN	2	GKVPITYLELLN2	30423.6	24374.5	21331.3
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	GKWLTPFDPIFTEADTFHLDK	GKWLTPFDPIFTEADTFHLDK	3	GKWLTPFDPIFTEADTFHLDK3		3685.21	
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	GKWLTPFDPIFTEADTFHLDKYK	GKWLTPFDPIFTEADTFHLDKYK	3	GKWLTPFDPIFTEADTFHLDKYK3	7045.2	4238.57	5119.58
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	GKWLTPFDPIFTEADTFHLDKYK	GKWLTPFDPIFTEADTFHLDKYK	4	GKWLTPFDPIFTEADTFHLDKYK4	11459	4985.82	6020.85
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	GKYPGQLEIVCR	GKYPGQLEIVC(UniMod:4)R	3	GKYPGQLEIVC(UniMod:4)R3	44301.1	42518	40107.9
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	GLAADQTQALYVGDAILSVNGADLR	GLAADQTQALYVGDAILSVNGADLR	3	GLAADQTQALYVGDAILSVNGADLR3	17798	19381	23353.3
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	GLAAHYCFPR	GLAAHYC(UniMod:4)FPR	2	GLAAHYC(UniMod:4)FPR2	7578.94	9971.69	7516.72
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	GLAAHYCFPR	GLAAHYC(UniMod:4)FPR	3	GLAAHYC(UniMod:4)FPR3	175201	208263	184793
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	GLAAITMDK	GLAAITMDK	2	GLAAITMDK2	4429.66	4717.8	15891.9
D3ZJF9	D3ZJF9	D3ZJF9_RAT	Gla	Alpha-galactosidase	1	GLACNPGCIITQILPEK	GLAC(UniMod:4)NPGC(UniMod:4)IITQILPEK	2	GLAC(UniMod:4)NPGC(UniMod:4)IITQILPEK2	24811.3	9514.57	17058.7
D3ZJF9	D3ZJF9	D3ZJF9_RAT	Gla	Alpha-galactosidase	1	GLACNPGCIITQILPEK	GLAC(UniMod:4)NPGC(UniMod:4)IITQILPEK	3	GLAC(UniMod:4)NPGC(UniMod:4)IITQILPEK3	21890.3	19926.4	15135.6
D3ZXI3	D3ZXI3	D3ZXI3_RAT	Notum	NOTUM, palmitoleoyl-protein carboxylesterase	1	GLADSGWFLDNK	GLADSGWFLDNK	2	GLADSGWFLDNK2	11885.4	11112.9	7536.53
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	GLADVQNLLR	GLADVQNLLR	2	GLADVQNLLR2	11579.4	18444	8718.24
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	GLAEQLTK	GLAEQLTK	1	GLAEQLTK1	6804.18	3878.2	1324.1
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	GLAEQLTK	GLAEQLTK	2	GLAEQLTK2	478802	335714	437574
Q920A6	Q920A6	RISC_RAT	Scpep1	Retinoid-inducible serine carboxypeptidase	1	GLAEVSDIAEQVLNAVNK	GLAEVSDIAEQVLNAVNK	2	GLAEVSDIAEQVLNAVNK2	6295.33	5507.17	2250.56
Q920A6	Q920A6	RISC_RAT	Scpep1	Retinoid-inducible serine carboxypeptidase	1	GLAEVSDIAEQVLNAVNK	GLAEVSDIAEQVLNAVNK	3	GLAEVSDIAEQVLNAVNK3	6706.05	7226.14	5395.85
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GLAFTDVDVDSIK	GLAFTDVDVDSIK	2	GLAFTDVDVDSIK2	361123	377940	367430
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GLAFTDVDVDSIK	GLAFTDVDVDSIK	3	GLAFTDVDVDSIK3	10643.5		10899.9
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	GLAGAVSELLR	GLAGAVSELLR	2	GLAGAVSELLR2	4.02269e+06	3.89439e+06	3.94157e+06
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	GLAGVENVSDLK	GLAGVENVSDLK	2	GLAGVENVSDLK2	6146.58	8987.7	
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	GLAGVENVSDLKK	GLAGVENVSDLKK	2	GLAGVENVSDLKK2	4706.48	1088.82	5199.48
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	GLAGVENVSDLKK	GLAGVENVSDLKK	3	GLAGVENVSDLKK3	38467.7	42629.1	25930.3
O88281	O88281	MEGF6_RAT	Megf6	Multiple epidermal growth factor-like domains protein 6	1	GLAHCGCHPGYQLAADR	GLAHC(UniMod:4)GC(UniMod:4)HPGYQLAADR	4	GLAHC(UniMod:4)GC(UniMod:4)HPGYQLAADR4		3068.14	6824.12
O88281	O88281	MEGF6_RAT	Megf6	Multiple epidermal growth factor-like domains protein 6	1	GLAHCGCHPGYQLAADRK	GLAHC(UniMod:4)GC(UniMod:4)HPGYQLAADRK	4	GLAHC(UniMod:4)GC(UniMod:4)HPGYQLAADRK4	8348.39	1655.97	5589.97
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	GLAHLHIHHVIHR	GLAHLHIHHVIHR	4	GLAHLHIHHVIHR4	13336.5	18211.2	12972.7
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	GLAHQLASPGLTTLPEASDVASITLALR	GLAHQLASPGLTTLPEASDVASITLALR	3	GLAHQLASPGLTTLPEASDVASITLALR3	10763.1	14915.4	
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	GLALDGQLK	GLALDGQLK	2	GLALDGQLK2	131687	113605	108974
A0A8I6GL10	A0A8I6GL10	A0A8I6GL10_RAT	Uchl5	Ubiquitin carboxyl-terminal hydrolase	1	GLALSNSDVIR	GLALSNSDVIR	2	GLALSNSDVIR2	24002	27798	13501.5
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	GLALTAAAIK	GLALTAAAIK	2	GLALTAAAIK2	23109.3	28356.3	30014.6
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	GLAMQHPATQVLIGTDSITSLHK	GLAMQHPATQVLIGTDSITSLHK	3	GLAMQHPATQVLIGTDSITSLHK3	4047.15	2098.59	2832.4
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	GLAMQHPATQVLIGTDSITSLHK	GLAMQHPATQVLIGTDSITSLHK	4	GLAMQHPATQVLIGTDSITSLHK4	39817.7	43914.4	42731.6
A0A0G2JV05	A0A0G2JV05	A0A0G2JV05_RAT	Mroh1	Maestro heat-like repeat family member 1	1	GLANMASGSPDK	GLANMASGSPDK	2	GLANMASGSPDK2	3410.69		
P62278	P62278;M0RCY2	RS13_RAT	Rps13	Small ribosomal subunit protein uS15	0	GLAPDLPEDLYHLIK	GLAPDLPEDLYHLIK	2	GLAPDLPEDLYHLIK2	7606	6405.31	
P62278	P62278;M0RCY2	RS13_RAT	Rps13	Small ribosomal subunit protein uS15	0	GLAPDLPEDLYHLIK	GLAPDLPEDLYHLIK	3	GLAPDLPEDLYHLIK3	30911.5	32559	29998
O55171	O55171;D3ZIQ1	ACOT2_RAT	Acot2	Acyl-coenzyme A thioesterase 2, mitochondrial	0	GLAPEQPVTLR	GLAPEQPVTLR	2	GLAPEQPVTLR2	97580.4	68794.4	88801.2
A0A8J8YFS5	F1M9C9;A0A8J8YFS5	A0A8J8YFS5_RAT	Hars1	Histidine--tRNA ligase, cytoplasmic	0	GLAPEVADR	GLAPEVADR	2	GLAPEVADR2	48819.2	46639.9	47095.1
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	GLAPGQDYQVTVR	GLAPGQDYQVTVR	2	GLAPGQDYQVTVR2	54221.3	57881.3	67991.7
P0CE43	P0CE43	GRB10_RAT	Grb10	Growth factor receptor-bound protein 10	1	GLAPPFNAPMR	GLAPPFNAPMR	2	GLAPPFNAPMR2	69991.5	63890.4	68137.3
Q5U4F3	Q5U4F3	F107B_RAT	Fam107b	Protein FAM107B	1	GLAPQNKPELQK	GLAPQNKPELQK	3	GLAPQNKPELQK3	44363.6	46746.8	43228.5
P31211	P31211	CBG_RAT	Serpina6	Corticosteroid-binding globulin	1	GLAPTNVDFAFNLYQR	GLAPTNVDFAFNLYQR	2	GLAPTNVDFAFNLYQR2	92954.5	75732.8	62910.4
P31211	P31211	CBG_RAT	Serpina6	Corticosteroid-binding globulin	1	GLAPTNVDFAFNLYQR	GLAPTNVDFAFNLYQR	3	GLAPTNVDFAFNLYQR3	32689.5	35618.4	23030.9
P52873	P52873	PYC_RAT	Pc	Pyruvate carboxylase, mitochondrial	1	GLAPVQAYLHIPDIIK	GLAPVQAYLHIPDIIK	3	GLAPVQAYLHIPDIIK3	7950	9509.26	2249.84
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	GLASFQR	GLASFQR	2	GLASFQR2	35377.4	50236.2	35898
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	GLASGSAETLPANFR	GLASGSAETLPANFR	2	GLASGSAETLPANFR2	64265	75974.1	75021.2
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	GLASLEQLYLHFNQIETLDPESFQHLPK	GLASLEQLYLHFNQIETLDPESFQHLPK	4	GLASLEQLYLHFNQIETLDPESFQHLPK4	37663.8	27238.8	36728.2
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	GLASPTAITPISSPLCSK	GLASPTAITPISSPLC(UniMod:4)SK	2	GLASPTAITPISSPLC(UniMod:4)SK2	12342.1	13796.3	13721.1
Q5XIU9	Q5XIU9;P70580;A0A8I6AGW6	PGRC2_RAT	Pgrmc2	Membrane-associated progesterone receptor component 2	0	GLATFCLDK	GLATFC(UniMod:4)LDK	2	GLATFC(UniMod:4)LDK2	238920	230676	244599
P70580	P70580;A0A8I6AGW6	PGRC1_RAT	Pgrmc1	Membrane-associated progesterone receptor component 1	0	GLATFCLDKEALK	GLATFC(UniMod:4)LDKEALK	3	GLATFC(UniMod:4)LDKEALK3	67968.5	53620.5	65566
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	GLAVFISDIR	GLAVFISDIR	2	GLAVFISDIR2	127442	104827	98176.8
B0BNA1	B0BNA1	SH3Y1_RAT	Sh3yl1	SH3 domain-containing YSC84-like protein 1	1	GLAVLSVIK	GLAVLSVIK	2	GLAVLSVIK2	5738.46	8347.37	10396.1
A0A8I6GAE6	A0A8I6GAE6	A0A8I6GAE6_RAT	Ddx19b	RNA helicase	1	GLAVNMVDSK	GLAVNMVDSK	2	GLAVNMVDSK2	10805.2	11154.7	9678.22
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	GLAVSDNGPCLGYR	GLAVSDNGPC(UniMod:4)LGYR	2	GLAVSDNGPC(UniMod:4)LGYR2	77257.7	89374.7	84037.7
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	GLAVSVLK	GLAVSVLK	2	GLAVSVLK2	3597.58		2447.77
A0A8I6A6W3	A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	1	GLAYCETHYNQLFGDVCFHCNR	GLAYC(UniMod:4)ETHYNQLFGDVC(UniMod:4)FHC(UniMod:4)NR	3	GLAYC(UniMod:4)ETHYNQLFGDVC(UniMod:4)FHC(UniMod:4)NR3	25016.8	33507.6	31856
A0A8I6A6W3	A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	1	GLAYCETHYNQLFGDVCFHCNR	GLAYC(UniMod:4)ETHYNQLFGDVC(UniMod:4)FHC(UniMod:4)NR	4	GLAYC(UniMod:4)ETHYNQLFGDVC(UniMod:4)FHC(UniMod:4)NR4	171503	158571	172191
O08773	O08773	RGS14_RAT	Rgs14	Regulator of G-protein signaling 14	1	GLAYFTEFLK	GLAYFTEFLK	2	GLAYFTEFLK2	31362	35679	31627.6
O08773	O08773	RGS14_RAT	Rgs14	Regulator of G-protein signaling 14	1	GLAYFTEFLKK	GLAYFTEFLKK	3	GLAYFTEFLKK3	2291.78	7905.65	5018.47
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	GLAYIQSR	GLAYIQSR	2	GLAYIQSR2	21617.2	23342.4	25587.2
P62909	P62909	RS3_RAT	Rps3	Small ribosomal subunit protein uS3	1	GLCAIAQAESLR	GLC(UniMod:4)AIAQAESLR	2	GLC(UniMod:4)AIAQAESLR2	39632.6	41046.6	29557.9
Q5U2Y0	Q5U2Y0	WIPI4_RAT	Wdr45	WD repeat domain phosphoinositide-interacting protein 4	1	GLCDLCPSLEK	GLC(UniMod:4)DLC(UniMod:4)PSLEK	2	GLC(UniMod:4)DLC(UniMod:4)PSLEK2	12123.7	4904.5	7269.41
A0A8I6G251	A0A8I6G251	A0A8I6G251_RAT	Tnpo3	Transportin 3	1	GLCEKPLASAAAK	GLC(UniMod:4)EKPLASAAAK	2	GLC(UniMod:4)EKPLASAAAK2	2385.08	4937.1	1062.7
A0A8I6G251	A0A8I6G251	A0A8I6G251_RAT	Tnpo3	Transportin 3	1	GLCEKPLASAAAK	GLC(UniMod:4)EKPLASAAAK	3	GLC(UniMod:4)EKPLASAAAK3	49674.9	43588.4	37477.4
P35435	P35435	ATPG_RAT	Atp5f1c	ATP synthase subunit gamma, mitochondrial	1	GLCGAIHSSVAK	GLC(UniMod:4)GAIHSSVAK	2	GLC(UniMod:4)GAIHSSVAK2	37792.1	40167.6	43419
P35435	P35435	ATPG_RAT	Atp5f1c	ATP synthase subunit gamma, mitochondrial	1	GLCGAIHSSVAK	GLC(UniMod:4)GAIHSSVAK	3	GLC(UniMod:4)GAIHSSVAK3	296465	333098	359278
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	GLCGSCNKPIAGQVVTALGR	GLC(UniMod:4)GSC(UniMod:4)NKPIAGQVVTALGR	3	GLC(UniMod:4)GSC(UniMod:4)NKPIAGQVVTALGR3	230278	184122	212736
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	GLCIIPTK	GLC(UniMod:4)IIPTK	2	GLC(UniMod:4)IIPTK2	51280.2	45886.5	36511.1
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	GLCLLEQIDSFKPPQR	GLC(UniMod:4)LLEQIDSFKPPQR	3	GLC(UniMod:4)LLEQIDSFKPPQR3	26669.2	31173.8	30726.9
Q06000	Q06000	LIPL_RAT	Lpl	Lipoprotein lipase	1	GLCLSCR	GLC(UniMod:4)LSC(UniMod:4)R	2	GLC(UniMod:4)LSC(UniMod:4)R2	139880	116916	136517
P35000	P35000	VIPR2_RAT	Vipr2	Vasoactive intestinal polypeptide receptor 2	1	GLCLTQPGSR	GLC(UniMod:4)LTQPGSR	2	GLC(UniMod:4)LTQPGSR2	18875.5	14587.4	20859.5
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	GLCQPGQK	GLC(UniMod:4)QPGQK	1	GLC(UniMod:4)QPGQK1		3211.39	5180.76
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	GLCQPGQK	GLC(UniMod:4)QPGQK	2	GLC(UniMod:4)QPGQK2		111163	
Q6J1Y9	Q6J1Y9	UBP19_RAT	Usp19	Ubiquitin carboxyl-terminal hydrolase 19	1	GLCRPENIGYPFLVSVPASR	GLC(UniMod:4)RPENIGYPFLVSVPASR	3	GLC(UniMod:4)RPENIGYPFLVSVPASR3	5494.8	4121.92	4075.15
Q5XIU9	Q5XIU9	PGRC2_RAT	Pgrmc2	Membrane-associated progesterone receptor component 2	1	GLCSGPGAGEESPAATLPR	GLC(UniMod:4)SGPGAGEESPAATLPR	2	GLC(UniMod:4)SGPGAGEESPAATLPR2	36551.8	30492.9	45112.7
Q5XIU9	Q5XIU9	PGRC2_RAT	Pgrmc2	Membrane-associated progesterone receptor component 2	1	GLCSGPGAGEESPAATLPR	GLC(UniMod:4)SGPGAGEESPAATLPR	3	GLC(UniMod:4)SGPGAGEESPAATLPR3	26027.9	30357.5	23465.9
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	GLCTDYRPSLEGR	GLC(UniMod:4)TDYRPSLEGR	3	GLC(UniMod:4)TDYRPSLEGR3	45271.4	37174.8	28592.8
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	GLCTGCSR	GLC(UniMod:4)TGC(UniMod:4)SR	2	GLC(UniMod:4)TGC(UniMod:4)SR2	24676.3	31537.8	28829.7
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	GLCVAKPTR	GLC(UniMod:4)VAKPTR	2	GLC(UniMod:4)VAKPTR2	6986.74	7.10857e+06	2898.64
Q8R1R5	Q8R1R5	C99L2_RAT	Cd99l2	CD99 antigen-like protein 2	1	GLDAAYVK	GLDAAYVK	2	GLDAAYVK2	19485.2	26574.2	25850.5
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	GLDAIELSR	GLDAIELSR	2	GLDAIELSR2	28720.2	23630.3	20436.6
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	GLDCDIDIQK	GLDC(UniMod:4)DIDIQK	2	GLDC(UniMod:4)DIDIQK2	29496.4	23273.3	20723
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	GLDDDRGPWR	GLDDDRGPWR	3	GLDDDRGPWR3	108657	105592	128585
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	GLDDPSQVVR	GLDDPSQVVR	2	GLDDPSQVVR2	21978.1	11275.2	22541
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	GLDFEAK	GLDFEAK	1	GLDFEAK1	29222.2	20315.7	32595.8
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	GLDFEAK	GLDFEAK	2	GLDFEAK2	1.48933e+06	1.5624e+06	1.62567e+06
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	GLDGAVDMGAR	GLDGAVDMGAR	2	GLDGAVDMGAR2	41301.5	39694.5	19015.8
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	GLDGDQLVVLTESPFRPHQR	GLDGDQLVVLTESPFRPHQR	3	GLDGDQLVVLTESPFRPHQR3	18955.4	13442.9	9956.97
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	GLDGDQLVVLTESPFRPHQR	GLDGDQLVVLTESPFRPHQR	4	GLDGDQLVVLTESPFRPHQR4	44266.3	53019.3	38817.2
B1WC42	B1WC42	B1WC42_RAT	Trip6	Thyroid hormone receptor interactor 6	1	GLDGIPFTVDATSQIHCIEDFHR	GLDGIPFTVDATSQIHC(UniMod:4)IEDFHR	4	GLDGIPFTVDATSQIHC(UniMod:4)IEDFHR4	5663.19	4531.24	
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	GLDGPRPNQK	GLDGPRPNQK	2	GLDGPRPNQK2	2691.89		3072.41
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	GLDHLNVTVGVDGTLYK	GLDHLNVTVGVDGTLYK	2	GLDHLNVTVGVDGTLYK2	2520.34	3165.65	9616.74
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	GLDHLNVTVGVDGTLYK	GLDHLNVTVGVDGTLYK	3	GLDHLNVTVGVDGTLYK3	66233.1	77366.1	63099.1
D4A031	D4A031	D4A031_RAT	Ddx42	DEAD-box helicase 42	1	GLDIPSIK	GLDIPSIK	2	GLDIPSIK2		5495.25	
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	GLDISNVK	GLDISNVK	2	GLDISNVK2	97005.4	123647	111992
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	GLDLEQITSATLMK	GLDLEQITSATLMK	2	GLDLEQITSATLMK2	6573	4043.45	10841.9
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	GLDLEQITSATLMK	GLDLEQITSATLMK	3	GLDLEQITSATLMK3	457.449	2540.76	
A0A8I5ZLW9	A0A8I5ZLW9	A0A8I5ZLW9_RAT	ENSRNOG00000063672	Ig-like domain-containing protein	1	GLDLVADISSK	GLDLVADISSK	2	GLDLVADISSK2	138625	122431	105450
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	GLDNKNPK	GLDNKNPK	2	GLDNKNPK2			4081.15
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	GLDPDGFLLVNMK	GLDPDGFLLVNMK	2	GLDPDGFLLVNMK2	5751.88	4311.95	4238.42
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	GLDPEQLGMLR	GLDPEQLGMLR	2	GLDPEQLGMLR2	23914.7	37068.4	34908.9
P12075	P12075	COX5B_RAT	Cox5b	Cytochrome c oxidase subunit 5B, mitochondrial	1	GLDPYNMLPPK	GLDPYNMLPPK	2	GLDPYNMLPPK2	477331	462816	464002
P12075	P12075	COX5B_RAT	Cox5b	Cytochrome c oxidase subunit 5B, mitochondrial	1	GLDPYNMLPPK	GLDPYNMLPPK	3	GLDPYNMLPPK3	14160.1	21120.6	23608
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	GLDQYTLASFGEGDR	GLDQYTLASFGEGDR	2	GLDQYTLASFGEGDR2	5508.36	6313.24	3257.39
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	GLDSREEVVGK	GLDSREEVVGK	3	GLDSREEVVGK3		9732.69	
P24049	A0A8I5ZRW8;A0A8I6A6U8;P24049;A0A8I5ZUD0	RL17_RAT	Rpl17	Large ribosomal subunit protein uL22	0	GLDVDSLVIEHIQVNK	GLDVDSLVIEHIQVNK	3	GLDVDSLVIEHIQVNK3	25195.3	30346.8	25082.9
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	GLDVESYESLERPLHK	GLDVESYESLERPLHK	3	GLDVESYESLERPLHK3	6952.86	9063.98	11255
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	GLDVESYESLERPLHK	GLDVESYESLERPLHK	4	GLDVESYESLERPLHK4	14763.2	15244.5	12266.7
A0A8I6GL55	A0A8I6GL55	A0A8I6GL55_RAT	ENSRNOG00000065406	Ig-like domain-containing protein	1	GLDWVAYISSSSGTVYADAVK	GLDWVAYISSSSGTVYADAVK	3	GLDWVAYISSSSGTVYADAVK3	8577.22	6772.09	12004.7
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	GLDYESQR	GLDYESQR	2	GLDYESQR2	32975.8	43424.4	38653.4
Q62940	Q62940;A0A8I6AEH7	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	0	GLDYGGVAR	GLDYGGVAR	2	GLDYGGVAR2	131171	154221	147026
B0LT89	B0LT89;A0A8I6GBQ0	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	0	GLDYLHSEK	GLDYLHSEK	2	GLDYLHSEK2	16558.8	16067.7	8213.66
B0LT89	B0LT89;A0A8I6GBQ0	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	0	GLDYLHSEKK	GLDYLHSEKK	3	GLDYLHSEKK3	85689.7	91774.5	102003
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	GLEAALVYVENAHVAGK	GLEAALVYVENAHVAGK	2	GLEAALVYVENAHVAGK2	13050.4	10092.9	7047.96
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	GLEAALVYVENAHVAGK	GLEAALVYVENAHVAGK	3	GLEAALVYVENAHVAGK3	146501	157463	145839
Q63663	Q63663	GBP2_RAT	Gbp2	Guanylate-binding protein 2	1	GLEAEAVLK	GLEAEAVLK	2	GLEAEAVLK2	23574.8	11851.8	17226.5
Q5BQE6	Q5BQE6	DHC24_RAT	Dhcr24	Delta(24)-sterol reductase	1	GLEAICEK	GLEAIC(UniMod:4)EK	2	GLEAIC(UniMod:4)EK2	47640.9	35606.1	36166.7
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	GLEATDDSPK	GLEATDDSPK	2	GLEATDDSPK2	20362.1	18295.3	28182.4
Q7TSU1	D4A631;Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	0	GLECLVSILK	GLEC(UniMod:4)LVSILK	2	GLEC(UniMod:4)LVSILK2	4578.58	10169.4	5570.72
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	GLECNFGASSTALK	GLEC(UniMod:4)NFGASSTALK	2	GLEC(UniMod:4)NFGASSTALK2	51819.4	48245.2	56143.2
Q63787	Q63787	P85A_RAT	Pik3r1	Phosphatidylinositol 3-kinase regulatory subunit alpha	1	GLECSTLYR	GLEC(UniMod:4)STLYR	2	GLEC(UniMod:4)STLYR2	4740.92	6458.15	2471.12
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	GLEDECVTDVK	GLEDEC(UniMod:4)VTDVK	2	GLEDEC(UniMod:4)VTDVK2	18358.1	18124.1	22022.9
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	GLEDGLLGMK	GLEDGLLGMK	2	GLEDGLLGMK2	16293.4	15263.8	10504.8
P10716	P10716	CLC4F_RAT	Clec4f	C-type lectin domain family 4 member F	1	GLEEAQSEIQALR	GLEEAQSEIQALR	2	GLEEAQSEIQALR2	6218.98	11814.5	6341.69
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	GLEEELK	GLEEELK	1	GLEEELK1	936086	1.10154e+06	998879
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	GLEEELK	GLEEELK	2	GLEEELK2	3.85495e+07	4.95495e+07	4.95505e+07
D3ZTC4	D3ZTC4	D3ZTC4_RAT	Ccdc88b	Coiled-coil domain containing 88B	1	GLEEELR	GLEEELR	2	GLEEELR2	58818.1	38807.8	33291.9
Q3B8R7	Q3B8R7	Q3B8R7_RAT	Mrpl47	Mitochondrial ribosomal protein L47	1	GLEEFFDDPK	GLEEFFDDPK	2	GLEEFFDDPK2	4181.58	5303.6	6891.71
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	GLEEGQAQAGQCPSLEGR	GLEEGQAQAGQC(UniMod:4)PSLEGR	2	GLEEGQAQAGQC(UniMod:4)PSLEGR2	77596.6	55996	55873.4
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	GLEEGQAQAGQCPSLEGR	GLEEGQAQAGQC(UniMod:4)PSLEGR	3	GLEEGQAQAGQC(UniMod:4)PSLEGR3	42898.3	36428.5	52013.4
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	GLEELLIGGSHLK	GLEELLIGGSHLK	3	GLEELLIGGSHLK3	17553.4	13264.3	31560.2
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	GLEETVAK	GLEETVAK	1	GLEETVAK1		2961.32	
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	GLEETVAK	GLEETVAK	2	GLEETVAK2	269986	318746	359351
Q8K4V4	Q8K4V4	SNX27_RAT	Snx27	Sorting nexin-27	1	GLEEYLEK	GLEEYLEK	2	GLEEYLEK2	15682.1	24930.1	20605.9
M0R7Q2	M0R7Q2	M0R7Q2_RAT	ENSRNOG00000065283	Ig-like domain-containing protein	1	GLEFIGEIKPDGSK	GLEFIGEIKPDGSK	3	GLEFIGEIKPDGSK3	27002.7	22952.5	30842
F7EYC4	F7EYC4	F7EYC4_RAT	Tom1	Target of myb1 membrane trafficking protein	1	GLEFPMTDLDMLSPIHTPQR	GLEFPMTDLDMLSPIHTPQR	3	GLEFPMTDLDMLSPIHTPQR3	76170.3	62263.5	72387.3
P08460	P08460	NID1_RAT	Nid1	Nidogen-1 (Fragment)	1	GLEGFLWK	GLEGFLWK	2	GLEGFLWK2	1.1474e+06	1.24506e+06	1.27449e+06
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	GLEHVER	GLEHVER	2	GLEHVER2	24920	8098.49	8134.35
A0A8I5Y4X4	A0A8I5Y4X4	A0A8I5Y4X4_RAT	Nub1	Negative regulator of ubiquitin-like proteins 1	1	GLEILAER	GLEILAER	2	GLEILAER2	17309	30389	17883
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	GLEILTDMSR	GLEILTDMSR	2	GLEILTDMSR2	153861	117198	106259
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	GLEILTDMSRPVQLSDR	GLEILTDMSRPVQLSDR	3	GLEILTDMSRPVQLSDR3	230430	210369	208232
P62944	P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	GLEISGTFTHR	GLEISGTFTHR	2	GLEISGTFTHR2	9257.28	7458.01	9507.53
P62944	P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	GLEISGTFTHR	GLEISGTFTHR	3	GLEISGTFTHR3	26700.8	17697.1	20798.8
P52303	P52303	AP1B1_RAT	Ap1b1	AP-1 complex subunit beta-1	1	GLEISGTFTR	GLEISGTFTR	2	GLEISGTFTR2	156151	133653	117315
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	GLELANGIK	GLELANGIK	2	GLELANGIK2	38592.1		8239.45
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	GLELHAK	GLELHAK	2	GLELHAK2	12806.9	21471.5	18742.6
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	GLELIASENFCSR	GLELIASENFC(UniMod:4)SR	2	GLELIASENFC(UniMod:4)SR2	5780.68	6812.04	15507.6
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	GLELISK	GLELISK	1	GLELISK1	5810.08	3084.84	
D3ZKQ3	D3ZKQ3	D3ZKQ3_RAT	Glmn	Glomulin, FKBP associated protein	1	GLELLETSLLR	GLELLETSLLR	2	GLELLETSLLR2	6723.85		1727.65
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	GLELQVMQLQQEK	GLELQVMQLQQEK	2	GLELQVMQLQQEK2	58215.7	65008.4	62843.1
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	GLELQVMQLQQEK	GLELQVMQLQQEK	3	GLELQVMQLQQEK3	18512.7	14761.8	11366.8
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	GLEMALLPHLQDHNLVK	GLEMALLPHLQDHNLVK	3	GLEMALLPHLQDHNLVK3	14500.5	19417.9	10826.7
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	GLEMALLPHLQDHNLVK	GLEMALLPHLQDHNLVK	4	GLEMALLPHLQDHNLVK4	18330.6	22091.2	36146.3
B1WBY5	B1WBY5	B1WBY5_RAT	Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	1	GLEMEGWEVVER	GLEMEGWEVVER	2	GLEMEGWEVVER2	7319.97	7777.61	8711.74
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	GLENLPPLQPQQHPVLPVPGER	GLENLPPLQPQQHPVLPVPGER	3	GLENLPPLQPQQHPVLPVPGER3	63906.6	77066.1	72387.1
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	GLENNVNVELLNALHSHMVNK	GLENNVNVELLNALHSHMVNK	4	GLENNVNVELLNALHSHMVNK4	11378.1	17521.3	12976
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	GLENNVNVELLNALHSHMVNKR	GLENNVNVELLNALHSHMVNKR	4	GLENNVNVELLNALHSHMVNKR4	3859.43	10496.7	3195.94
F1M5M9	F1M287;F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	0	GLENPLFPK	GLENPLFPK	2	GLENPLFPK2	71185.4	71672.2	75837.6
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	GLEPMLEASR	GLEPMLEASR	2	GLEPMLEASR2	52633	61027.6	44405.4
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	GLEPSPAAVAALPPEVR	GLEPSPAAVAALPPEVR	2	GLEPSPAAVAALPPEVR2	14843.3	18070.7	11774.4
Q2KJ09	Q2KJ09	UBP16_RAT	Usp16	Ubiquitin carboxyl-terminal hydrolase 16	1	GLEQGNLK	GLEQGNLK	2	GLEQGNLK2	3752.81	11083.3	
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	GLEQVVCEPHNEINFLK	GLEQVVC(UniMod:4)EPHNEINFLK	3	GLEQVVC(UniMod:4)EPHNEINFLK3	680293	671442	747466
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	GLESIINIIHSSLAEPR	GLESIINIIHSSLAEPR	2	GLESIINIIHSSLAEPR2	5305.65		
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	GLESIINIIHSSLAEPR	GLESIINIIHSSLAEPR	3	GLESIINIIHSSLAEPR3	29145	13734.2	20263.1
P47875	P47875	CSRP1_RAT	Csrp1	Cysteine and glycine-rich protein 1	1	GLESTTLADK	GLESTTLADK	2	GLESTTLADK2	49928.7	37100.4	48134.5
P47875	P47875	CSRP1_RAT	Csrp1	Cysteine and glycine-rich protein 1	1	GLESTTLADKDGEIYCK	GLESTTLADKDGEIYC(UniMod:4)K	2	GLESTTLADKDGEIYC(UniMod:4)K2	10315.3	8928.56	7122.07
P47875	P47875	CSRP1_RAT	Csrp1	Cysteine and glycine-rich protein 1	1	GLESTTLADKDGEIYCK	GLESTTLADKDGEIYC(UniMod:4)K	3	GLESTTLADKDGEIYC(UniMod:4)K3	133222	130347	131813
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	GLETAEVNPENLAK	GLETAEVNPENLAK	2	GLETAEVNPENLAK2	32552.8	25239.4	23043
Q9R0C5	Q9R0C5	GALT7_RAT	Galnt7	N-acetylgalactosaminyltransferase 7	1	GLETAYCIDSMGK	GLETAYC(UniMod:4)IDSMGK	2	GLETAYC(UniMod:4)IDSMGK2	7554.78	6839.24	2930.75
Q641X3	Q641X3	HEXA_RAT	Hexa	Beta-hexosaminidase subunit alpha	1	GLETFSQLVWK	GLETFSQLVWK	2	GLETFSQLVWK2	13165.3	14217.5	14845.6
P08461	A0A8I6B5J2;P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	0	GLETIASDVVSLASK	GLETIASDVVSLASK	2	GLETIASDVVSLASK2	57227.7	50040.4	71618.5
P08461	A0A8I6B5J2;P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	0	GLETIASDVVSLASK	GLETIASDVVSLASK	3	GLETIASDVVSLASK3	5245.83	6102.74	14303.7
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	GLETPFFPMILPTR	GLETPFFPMILPTR	2	GLETPFFPMILPTR2	4997.01	11175.3	8265.56
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	GLETQTK	GLETQTK	1	GLETQTK1	579679		802257
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	GLETQTK	GLETQTK	2	GLETQTK2	4.17386e+07		5.03062e+07
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	GLETQTKLVEGQTHISISR	GLETQTKLVEGQTHISISR	4	GLETQTKLVEGQTHISISR4	6259.85		3529.16
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	GLETQTKLVEGQTHISISRDQFQAALGK	GLETQTKLVEGQTHISISRDQFQAALGK	4	GLETQTKLVEGQTHISISRDQFQAALGK4	39333	32656.9	23197.7
P07872	P07872	ACOX1_RAT	Acox1	Peroxisomal acyl-coenzyme A oxidase 1	1	GLETTATYDPK	GLETTATYDPK	2	GLETTATYDPK2	4929.64	2433.32	3526.62
P01026	P01026	CO3_RAT	C3	Complement C3	1	GLEVSITAR	GLEVSITAR	2	GLEVSITAR2	808136	745947	632746
P51635	P51635	AK1A1_RAT	Akr1a1	Aldo-keto reductase family 1 member A1	1	GLEVTAYSPLGSSDR	GLEVTAYSPLGSSDR	2	GLEVTAYSPLGSSDR2	14048.6	22998.4	18276.9
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	GLEVTSTEVVDR	GLEVTSTEVVDR	2	GLEVTSTEVVDR2	6009.71	1326.48	
A0A8I6A7R6	A0A8I6A7R6;F1M0U4	A0A8I6A7R6_RAT	ENSRNOG00000065040	Ig-like domain-containing protein	0	GLEWIAASR	GLEWIAASR	2	GLEWIAASR2	280239	295916	242581
A0A8I6GLJ8	A0A8I6GLJ8	A0A8I6GLJ8_RAT	ENSRNOG00000071091	Ig-like domain-containing protein	1	GLEWIAR	GLEWIAR	2	GLEWIAR2	235100	187720	219015
A0A8I6ALW9	A0A8I6ALW9	A0A8I6ALW9_RAT	ENSRNOG00000065952	Ig-like domain-containing protein	1	GLEWIGEINK	GLEWIGEINK	2	GLEWIGEINK2	435472	372300	402533
A0A8I6ALW9	A0A8I6ALW9	A0A8I6ALW9_RAT	ENSRNOG00000065952	Ig-like domain-containing protein	1	GLEWIGEINKDSSTINYTPSLKDK	GLEWIGEINKDSSTINYTPSLKDK	3	GLEWIGEINKDSSTINYTPSLKDK3	3903.45	11747.9	10433.3
A0A8I6A2J1	A0A8I6A2J1	A0A8I6A2J1_RAT	ENSRNOG00000064886	Ig-like domain-containing protein	1	GLEWIGR	GLEWIGR	2	GLEWIGR2	304372	254970	258420
M0RBD5	M0RBD5	M0RBD5_RAT	ENSRNOG00000070933	Ig-like domain-containing protein	1	GLEWLANIWWDDDK	GLEWLANIWWDDDK	2	GLEWLANIWWDDDK2	22197.2	15392.3	14576.7
M0RBD5	M0RBD5	M0RBD5_RAT	ENSRNOG00000070933	Ig-like domain-containing protein	1	GLEWLANIWWDDDK	GLEWLANIWWDDDK	3	GLEWLANIWWDDDK3	836.485	2653.56	1669.43
M0RBD5	M0RBD5	M0RBD5_RAT	ENSRNOG00000070933	Ig-like domain-containing protein	1	GLEWLANIWWDDDKYYNPSLK	GLEWLANIWWDDDKYYNPSLK	3	GLEWLANIWWDDDKYYNPSLK3	24336.7	13659	14401
A0A8I5ZLU0	A0A8I5ZLU0	A0A8I5ZLU0_RAT	ENSRNOG00000066926	Ig-like domain-containing protein	1	GLEWLATICWEDSK	GLEWLATIC(UniMod:4)WEDSK	2	GLEWLATIC(UniMod:4)WEDSK2		4997.55	3857.47
A0A8I5ZYE2	A0A8I5ZYE2	A0A8I5ZYE2_RAT	ENSRNOG00000065191	Ig-like domain-containing protein	1	GLEWLATIGWEDVK	GLEWLATIGWEDVK	2	GLEWLATIGWEDVK2	38322.7	36695.2	48986.7
A0A8I5ZYE2	A0A8I5ZYE2	A0A8I5ZYE2_RAT	ENSRNOG00000065191	Ig-like domain-containing protein	1	GLEWLATIGWEDVK	GLEWLATIGWEDVK	3	GLEWLATIGWEDVK3	14663.3	9212.59	13666
A0A8I6ATU2	A0A8I6ATU2	A0A8I6ATU2_RAT	LOC691815	Ig-like domain-containing protein	1	GLEWMGIIWGDGSTNYNSALK	GLEWMGIIWGDGSTNYNSALK	3	GLEWMGIIWGDGSTNYNSALK3	6986		7530.69
A0A8I5ZMX9	A0A8I5ZMX9	A0A8I5ZMX9_RAT	ENSRNOG00000063638	Ig-like domain-containing protein	1	GLEWMGIIWR	GLEWMGIIWR	2	GLEWMGIIWR2	9484.1	7191.24	2857.25
A0A8I6A6J2	A0A8I6A6J2	A0A8I6A6J2_RAT	LOC100359793	Ig-like domain-containing protein	1	GLEWMGTIWNDGSTDYNSALK	GLEWMGTIWNDGSTDYNSALK	3	GLEWMGTIWNDGSTDYNSALK3	117101	106387	146321
A0A8I5ZWC4	A0A8I5ZWC4	A0A8I5ZWC4_RAT	ENSRNOG00000062609	Ig-like domain-containing protein	1	GLEWMGVIWNTGGTR	GLEWMGVIWNTGGTR	2	GLEWMGVIWNTGGTR2	11629.2		12662.6
A0A8I6G7J3	P01805;A0A8I6AGR0;A0A8I6G7J3	A0A8I6G7J3_RAT	ENSRNOG00000070816	Ig-like domain-containing protein	0	GLEWVAEIR	GLEWVAEIR	2	GLEWVAEIR2	89661.5	26162.8	50786
A0A0G2JZL1	A0A0G2JZL1	A0A0G2JZL1_RAT	AABR07065808.1	Ig-like domain-containing protein	1	GLEWVALIK	GLEWVALIK	2	GLEWVALIK2	32371.5	33566.5	38131.1
F1LZ11	F1LZ11	F1LZ11_RAT	AABR07065814.2	Ig-like domain-containing protein	1	GLEWVAR	GLEWVAR	2	GLEWVAR2	578909	569585	507907
A0A8I6A9Q7	A0A8I6A9Q7	A0A8I6A9Q7_RAT	ENSRNOG00000070891	Ig-like domain-containing protein	1	GLEWVASIR	GLEWVASIR	2	GLEWVASIR2	75877.4	199464	102187
F1LYU3	F1LYU3	F1LYU3_RAT	ENSRNOG00000062976	Ig-like domain-containing protein	1	GLEWVASISPSGGSTYYR	GLEWVASISPSGGSTYYR	2	GLEWVASISPSGGSTYYR2	175412	171579	171767
F1LYU3	F1LYU3	F1LYU3_RAT	ENSRNOG00000062976	Ig-like domain-containing protein	1	GLEWVASISPSGGSTYYR	GLEWVASISPSGGSTYYR	3	GLEWVASISPSGGSTYYR3	16878.7	13456.7	18863.6
A0A8I6AEB7	A0A8I6AEB7	A0A8I6AEB7_RAT	ENSRNOG00000062762	Ig-like domain-containing protein	1	GLEWVASISTGGGNTYYR	GLEWVASISTGGGNTYYR	2	GLEWVASISTGGGNTYYR2	60747.9	50358.6	51432.8
Q63313	Q63313	LBP_RAT	Lbp	Lipopolysaccharide-binding protein	1	GLEYAAK	GLEYAAK	1	GLEYAAK1	2498.46	2221.39	3559.5
F1LWD1	F1LWD1	F1LWD1_RAT	Igh-6-ps1	Ig-like domain-containing protein	1	GLEYLATIWWDDDK	GLEYLATIWWDDDK	2	GLEYLATIWWDDDK2	10682.7	7966.2	7241.21
O54748	O54748;A0A8I6A0F8	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	0	GLEYLHFMR	GLEYLHFMR	2	GLEYLHFMR2	55153.9	46800.1	33179.9
O54748	O54748;A0A8I6A0F8	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	0	GLEYLHFMR	GLEYLHFMR	3	GLEYLHFMR3	352648	390835	357655
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	GLEYLYLNVHDEDRDDQTR	GLEYLYLNVHDEDRDDQTR	3	GLEYLYLNVHDEDRDDQTR3	11158.1	12151.7	9478.03
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	GLEYLYLNVHDEDRDDQTR	GLEYLYLNVHDEDRDDQTR	4	GLEYLYLNVHDEDRDDQTR4	16869.1	12673.8	17338.1
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	GLEYLYLSVHDEDRDDHTR	GLEYLYLSVHDEDRDDHTR	3	GLEYLYLSVHDEDRDDHTR3	5287.37	3712.76	
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	GLEYLYLSVHDEDRDDHTR	GLEYLYLSVHDEDRDDHTR	4	GLEYLYLSVHDEDRDDHTR4	54607.1	53908.1	50249.8
D3ZII8	D3ZII8	D3ZII8_RAT	Smyd5	Histone-lysine N-trimethyltransferase SMYD5	1	GLFATQLIR	GLFATQLIR	2	GLFATQLIR2	44953.5	48190.3	48231.1
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	GLFDEYGSK	GLFDEYGSK	2	GLFDEYGSK2	1.68696e+06	1.89683e+06	1.8731e+06
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	GLFDEYGSKK	GLFDEYGSKK	2	GLFDEYGSKK2	149168	188687	160668
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	GLFDEYGSKK	GLFDEYGSKK	3	GLFDEYGSKK3	1.0109e+06	1.36027e+06	1.35944e+06
G3V904	G3V904	G3V904_RAT	Pld4	Phospholipase D family, member 4	1	GLFDGVPTTAYFSASPPSLCPHGR	GLFDGVPTTAYFSASPPSLC(UniMod:4)PHGR	3	GLFDGVPTTAYFSASPPSLC(UniMod:4)PHGR3	4267.39		6390.09
Q7TPB4	Q7TPB4	CD276_RAT	Cd276	CD276 antigen	1	GLFDVHSVLR	GLFDVHSVLR	3	GLFDVHSVLR3	19399	10834.4	12477.2
Q66HC5	Q66HC5	NUP93_RAT	Nup93	Nuclear pore complex protein Nup93	1	GLFEEAAK	GLFEEAAK	2	GLFEEAAK2	21947.7	26119.8	22640
Q7TP48	Q7TP48	APMAP_RAT	Apmap	Adipocyte plasma membrane-associated protein	1	GLFEVNPQK	GLFEVNPQK	2	GLFEVNPQK2	49347	65190.3	63369.2
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	GLFGGGAQSLDREELFGESSSGK	GLFGGGAQSLDREELFGESSSGK	3	GLFGGGAQSLDREELFGESSSGK3	57088	57462.4	62658.1
D3ZYT2	D3ZYT2	D3ZYT2_RAT	Mrps5	Mitochondrial ribosomal protein S5	1	GLFHGLAR	GLFHGLAR	2	GLFHGLAR2	5164.46		
B5DEY9	B5DEY9	B5DEY9_RAT	Csgalnact1	Hexosyltransferase	1	GLFHLWHEK	GLFHLWHEK	3	GLFHLWHEK3	6124.57	12501.5	7339.95
P35704	P35704	PRDX2_RAT	Prdx2	Peroxiredoxin-2	1	GLFIIDAK	GLFIIDAK	2	GLFIIDAK2	115661	102529	138879
Q9Z0V5	Q63716;A0A0G2K3Z9;Q9Z0V5	PRDX4_RAT	Prdx4	Peroxiredoxin-4	0	GLFIIDDK	GLFIIDDK	2	GLFIIDDK2	413431	391464	367144
Q63716	Q63716;A0A0G2K3Z9	PRDX1_RAT	Prdx1	Peroxiredoxin-1	0	GLFIIDDKGILR	GLFIIDDKGILR	3	GLFIIDDKGILR3	4618.94	6602.59	
Q9Z0V5	Q9Z0V5	PRDX4_RAT	Prdx4	Peroxiredoxin-4	1	GLFIIDDKGVLR	GLFIIDDKGVLR	3	GLFIIDDKGVLR3	6129.87	10886	18972.4
Q9Z0V6	Q9Z0V6	PRDX3_RAT	Prdx3	Thioredoxin-dependent peroxide reductase, mitochondrial	1	GLFIIDPNGVIK	GLFIIDPNGVIK	2	GLFIIDPNGVIK2	598764	689165	650664
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	GLFINSEFLPVVK	GLFINSEFLPVVK	2	GLFINSEFLPVVK2	7476.98	12246.2	8037.15
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	GLFIQQLRPTQNLQPR	GLFIQQLRPTQNLQPR	3	GLFIQQLRPTQNLQPR3	41315.5	56143.4	36873.4
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	GLFISIHDK	GLFISIHDK	2	GLFISIHDK2	19317	11990.9	
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	GLFISISDR	GLFISISDR	2	GLFISISDR2	22171.3	21586.1	23948.7
A0A8I5Y2B8	A0A8I5Y2B8	A0A8I5Y2B8_RAT	ENSRNOG00000062500	Peroxiredoxin C-terminal domain-containing protein	1	GLFLIDDK	GLFLIDDK	1	GLFLIDDK1	6682.95	6126.7	5461.02
A0A8I5Y2B8	A0A8I5Y2B8	A0A8I5Y2B8_RAT	ENSRNOG00000062500	Peroxiredoxin C-terminal domain-containing protein	1	GLFLIDDK	GLFLIDDK	2	GLFLIDDK2	413431	391464	367144
A0A8I5Y2B8	A0A8I5Y2B8	A0A8I5Y2B8_RAT	ENSRNOG00000062500	Peroxiredoxin C-terminal domain-containing protein	1	GLFLIDDKGILR	GLFLIDDKGILR	3	GLFLIDDKGILR3			8347.77
A0A096MKE0	A0A096MKE0	A0A096MKE0_RAT	Asph	Aspartate-beta-hydroxylase	1	GLFLPEDENLR	GLFLPEDENLR	2	GLFLPEDENLR2	54168.3	29224.2	23068.5
A0A096MKE0	A0A096MKE0	A0A096MKE0_RAT	Asph	Aspartate-beta-hydroxylase	1	GLFLPEDENLREK	GLFLPEDENLREK	3	GLFLPEDENLREK3	32129	40637.6	35346.8
D3ZZ38	D3ZZ38	D3ZZ38_RAT	Snx18	Sorting nexin	1	GLFPASYVQVIR	GLFPASYVQVIR	2	GLFPASYVQVIR2	2875.02		5953.9
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	GLFPFHQR	GLFPFHQR	2	GLFPFHQR2	2.10062e+06	1.88786e+06	1.83875e+06
Q5U2U2	Q5U2U2	CRKL_RAT	Crkl	Crk-like protein	1	GLFPFTHVK	GLFPFTHVK	2	GLFPFTHVK2	9132.38	10108	8971.62
P31720	P31720	C1QA_RAT	C1qa	Complement C1q subcomponent subunit A	1	GLFQVLAGGTVLQLQR	GLFQVLAGGTVLQLQR	2	GLFQVLAGGTVLQLQR2	6360	14400.7	9300.69
P31720	P31720	C1QA_RAT	C1qa	Complement C1q subcomponent subunit A	1	GLFQVLAGGTVLQLQR	GLFQVLAGGTVLQLQR	3	GLFQVLAGGTVLQLQR3	6841.08	8583.68	6576.2
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	GLFSAITRPTAVNSLVSK	GLFSAITRPTAVNSLVSK	3	GLFSAITRPTAVNSLVSK3	73549	96719.3	69614.1
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	GLFSLDSASGLLK	GLFSLDSASGLLK	2	GLFSLDSASGLLK2	21477.3	14183.2	17157.8
D3ZKT0	D3ZKT0	TAM41_RAT	Tamm41	Phosphatidate cytidylyltransferase, mitochondrial	1	GLFTAGVK	GLFTAGVK	2	GLFTAGVK2	15892	19679.7	21958.8
A0A8I6AK45	A0A8I6AK45	A0A8I6AK45_RAT	Mtch2	Mitochondrial carrier 2	1	GLFTGLTPR	GLFTGLTPR	2	GLFTGLTPR2	174471	188514	182295
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	GLGAGVSK	GLGAGVSK	1	GLGAGVSK1	954844	875802	1.01228e+06
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	GLGAPLTDDQQSR	GLGAPLTDDQQSR	2	GLGAPLTDDQQSR2	172926	170747	148128
Q09073	A0A8I5Y643;A0A8I6A075;A0A8I6G2T3;A0A8I6GK78;Q09073	ADT2_RAT	Slc25a5	ADP/ATP translocase 2	0	GLGDCLVK	GLGDC(UniMod:4)LVK	1	GLGDC(UniMod:4)LVK1	30193.1	24535.2	14289.5
Q09073	A0A8I5Y643;A0A8I6A075;A0A8I6G2T3;A0A8I6GK78;Q09073	ADT2_RAT	Slc25a5	ADP/ATP translocase 2	0	GLGDCLVK	GLGDC(UniMod:4)LVK	2	GLGDC(UniMod:4)LVK2	2.93479e+06	3.0551e+06	2.70371e+06
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	GLGDGIESLGTVQEPVVGSSSPEQGSQK	GLGDGIESLGTVQEPVVGSSSPEQGSQK	3	GLGDGIESLGTVQEPVVGSSSPEQGSQK3	3184.19	6771.68	3882.87
Q06000	Q06000	LIPL_RAT	Lpl	Lipoprotein lipase	1	GLGDVDQLVK	GLGDVDQLVK	2	GLGDVDQLVK2	97668.5	115137	96090.7
M0R6Q0	M0R6Q0	M0R6Q0_RAT	Casd1	CAS1 domain containing 1	1	GLGEADVGTGK	GLGEADVGTGK	2	GLGEADVGTGK2	2133.51		
A0A8I6B124	A0A8I6B124	A0A8I6B124_RAT	Zswim8	Zinc finger, SWIM-type containing 8	1	GLGEGVSSQR	GLGEGVSSQR	2	GLGEGVSSQR2	12854.6	13110.5	10917.4
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	GLGEHEMDEDEEDYESSAK	GLGEHEMDEDEEDYESSAK	3	GLGEHEMDEDEEDYESSAK3	21443.6	14936.9	24657.9
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	GLGEISAATEFK	GLGEISAATEFK	2	GLGEISAATEFK2	1.45788e+06	1.48581e+06	1.74867e+06
Q9Z2Q7	Q9Z2Q7	STX8_RAT	Stx8	Syntaxin-8	1	GLGFDEIR	GLGFDEIR	2	GLGFDEIR2	49226.7	41795	32144.2
Q9QZR8	Q9QZR8;A0A8I5ZL66	PDZD2_RAT	Pdzd2	PDZ domain-containing protein 2	0	GLGFSIAGGR	GLGFSIAGGR	2	GLGFSIAGGR2	7810.73	7245.92	
Q62696	P31016;Q63622;Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	0	GLGFSIAGGVGNQHIPGDNSIYVTK	GLGFSIAGGVGNQHIPGDNSIYVTK	3	GLGFSIAGGVGNQHIPGDNSIYVTK3	14556.6	10976.5	12453.9
Q8VI04	Q8VI04	ASGL1_RAT	Asrgl1	Isoaspartyl peptidase/L-asparaginase	1	GLGGLILINK	GLGGLILINK	2	GLGGLILINK2	1044.26	4639.82	4732.6
A0A8I6AHW4	A0A8I6AHW4	A0A8I6AHW4_RAT	Ppp1r3f	Protein phosphatase 1 regulatory subunit 3F	1	GLGGPAK	GLGGPAK	1	GLGGPAK1			563473
E9PU10	E9PU10	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	1	GLGHEEAESADVGTVETTMYK	GLGHEEAESADVGTVETTMYK	3	GLGHEEAESADVGTVETTMYK3	62565.7	54137.7	63337.1
Q6AYT3	Q6AYT3	RTCB_RAT	Rtcb	RNA-splicing ligase RtcB homolog	1	GLGHQVATDALVAMEK	GLGHQVATDALVAMEK	3	GLGHQVATDALVAMEK3	31139.3	23256.9	20586.8
F1LRI5	F1LRI5	F1LRI5_RAT	Gcn1	GCN1 activator of EIF2AK4	1	GLGILSLK	GLGILSLK	2	GLGILSLK2	2688.64		
A0A0G2K931	A0A0G2K931	A0A0G2K931_RAT	Psat1	Phosphoserine aminotransferase	1	GLGISVLEMSHR	GLGISVLEMSHR	3	GLGISVLEMSHR3	8814.03	3430.57	7513.96
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	GLGLCGTALVSYLISLHNK	GLGLC(UniMod:4)GTALVSYLISLHNK	3	GLGLC(UniMod:4)GTALVSYLISLHNK3	23458.5	15655.5	
P60123	A0A0G2K0H9;P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	0	GLGLDESGLAK	GLGLDESGLAK	2	GLGLDESGLAK2	125376	115251	129224
B0BNH1	B0BNH1	B0BNH1_RAT	Gnptg	N-acetylglucosamine-1-phosphate transferase subunit gamma	1	GLGLETLDICR	GLGLETLDIC(UniMod:4)R	2	GLGLETLDIC(UniMod:4)R2	22986.3	14903.2	17046.5
B0BNH1	B0BNH1	B0BNH1_RAT	Gnptg	N-acetylglucosamine-1-phosphate transferase subunit gamma	1	GLGLETLDICRK	GLGLETLDIC(UniMod:4)RK	3	GLGLETLDIC(UniMod:4)RK3	14828.2	9319.28	
Q1HAQ0	Q1HAQ0	PCAT1_RAT	Lpcat1	Lysophosphatidylcholine acyltransferase 1	1	GLGLKPENLEK	GLGLKPENLEK	2	GLGLKPENLEK2	9618.74	10758.5	6153.26
Q1HAQ0	Q1HAQ0	PCAT1_RAT	Lpcat1	Lysophosphatidylcholine acyltransferase 1	1	GLGLKPENLEK	GLGLKPENLEK	3	GLGLKPENLEK3	230911	223371	217231
Q1HAQ0	Q1HAQ0	PCAT1_RAT	Lpcat1	Lysophosphatidylcholine acyltransferase 1	1	GLGLKPENLEKDLDK	GLGLKPENLEKDLDK	3	GLGLKPENLEKDLDK3	18083.3	23314.6	19506.4
Q1HAQ0	Q1HAQ0	PCAT1_RAT	Lpcat1	Lysophosphatidylcholine acyltransferase 1	1	GLGLKPENLEKDLDK	GLGLKPENLEKDLDK	4	GLGLKPENLEKDLDK4	6160.03	9379.82	13255.6
O55164	F1MAD2;O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	0	GLGLSIVGK	GLGLSIVGK	2	GLGLSIVGK2	12453.7	13310.4	8348.22
Q5U2N0	Q5U2N0	PYRG2_RAT	Ctps2	CTP synthase 2	1	GLGLSPDLIVCR	GLGLSPDLIVC(UniMod:4)R	2	GLGLSPDLIVC(UniMod:4)R2	17858.6	15447.5	15137.5
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	GLGLSPDLVVCR	GLGLSPDLVVC(UniMod:4)R	2	GLGLSPDLVVC(UniMod:4)R2	486072	453827	535907
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	GLGMEVFPVDFIYRPWK	GLGMEVFPVDFIYRPWK	3	GLGMEVFPVDFIYRPWK3	6555.43	3653.16	4445.75
A0A8I6AL00	A0A8I6AL00	A0A8I6AL00_RAT	Ndufs8	NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial	1	GLGMTLSYLFR	GLGMTLSYLFR	2	GLGMTLSYLFR2	41273.6	33089.4	39588.7
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	GLGNYLYSFASAATK	GLGNYLYSFASAATK	2	GLGNYLYSFASAATK2	64234.5	64454.2	59836.8
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	GLGNYLYSFASAATK	GLGNYLYSFASAATK	3	GLGNYLYSFASAATK3	19432.4	29159.5	22633.5
P70483	P70483	STRN_RAT	Strn	Striatin	1	GLGPLAEAAAAGDGAAAAGAAR	GLGPLAEAAAAGDGAAAAGAAR	2	GLGPLAEAAAAGDGAAAAGAAR2	94836.2	114125	69043.8
P70483	P70483	STRN_RAT	Strn	Striatin	1	GLGPLAEAAAAGDGAAAAGAAR	GLGPLAEAAAAGDGAAAAGAAR	3	GLGPLAEAAAAGDGAAAAGAAR3	103707	121421	133829
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	GLGPSIDTPPR	GLGPSIDTPPR	2	GLGPSIDTPPR2	41533.3	39475.4	27176.8
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	GLGQGVHDNK	GLGQGVHDNK	2	GLGQGVHDNK2			8891.93
A0A0G2K130	A0A0G2K130	A0A0G2K130_RAT	Tank	TRAF family member-associated NFKB activator	1	GLGRDEEDTSFESLSK	GLGRDEEDTSFESLSK	3	GLGRDEEDTSFESLSK3	3977.23		
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	GLGSGEDELQK	GLGSGEDELQK	2	GLGSGEDELQK2	38954.4	36573.6	37805.6
Q2THW7	Q2THW7	ZDHC5_RAT	Zdhhc5	Palmitoyltransferase ZDHHC5	1	GLGSPEPGTTAPYLGR	GLGSPEPGTTAPYLGR	2	GLGSPEPGTTAPYLGR2	10639.6	9938.46	14920.5
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	GLGSQVEALK	GLGSQVEALK	2	GLGSQVEALK2	20081.7	17325.4	15631.3
Q6I7R3	Q6I7R3	ISOC1_RAT	Isoc1	Isochorismatase domain-containing protein 1	1	GLGSTVQEIDLTGVK	GLGSTVQEIDLTGVK	2	GLGSTVQEIDLTGVK2	1997.58	2836.47	4209.67
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	GLGSVFVWASGNGGR	GLGSVFVWASGNGGR	2	GLGSVFVWASGNGGR2	33607	28541.6	33875.1
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	GLGSVFVWASGNGGR	GLGSVFVWASGNGGR	3	GLGSVFVWASGNGGR3	6284.68	4346.61	1315.93
P55260	P55260	ANXA4_RAT	Anxa4	Annexin A4	1	GLGTDEDAIIGVLACR	GLGTDEDAIIGVLAC(UniMod:4)R	2	GLGTDEDAIIGVLAC(UniMod:4)R2	7214.74	3446.93	
D3ZJZ0	D3ZJZ0	D3ZJZ0_RAT	Tmem205	Transmembrane protein 205	1	GLGTEVPGSLQGPDPYR	GLGTEVPGSLQGPDPYR	2	GLGTEVPGSLQGPDPYR2	406662	444616	452149
D3ZJZ0	D3ZJZ0	D3ZJZ0_RAT	Tmem205	Transmembrane protein 205	1	GLGTEVPGSLQGPDPYR	GLGTEVPGSLQGPDPYR	3	GLGTEVPGSLQGPDPYR3	59103.5	59552.4	56832
Q04753	Q04753	ICLN_RAT	Clns1a	Methylosome subunit pICln	1	GLGTGTLYIAESR	GLGTGTLYIAESR	2	GLGTGTLYIAESR2	42352.9	42750.9	47859.7
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	GLGVEIAK	GLGVEIAK	1	GLGVEIAK1	2201.2	2246.28	
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	GLGVEIAK	GLGVEIAK	2	GLGVEIAK2	151050	215893	173626
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	GLGVLDTGTAETK	GLGVLDTGTAETK	2	GLGVLDTGTAETK2	89647	104292	89816.1
F1LN92	F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	1	GLGYAQYLPK	GLGYAQYLPK	2	GLGYAQYLPK2	29025.8	29583.2	25713.4
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	GLGYSAHFVGGCLIITSIK	GLGYSAHFVGGC(UniMod:4)LIITSIK	3	GLGYSAHFVGGC(UniMod:4)LIITSIK3		5643.5	
Q9Z1L0	Q9Z1L0	PK3CB_RAT	Pik3cb	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform	1	GLHEFDALKDPEVNEFR	GLHEFDALKDPEVNEFR	4	GLHEFDALKDPEVNEFR4	6463.5	8238.19	17164.7
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	GLHFLHSR	GLHFLHSR	2	GLHFLHSR2	7806.75		
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	GLHHQLQSAFPQVR	GLHHQLQSAFPQVR	3	GLHHQLQSAFPQVR3	11591.9	15376.6	17629.9
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	GLHHQLQSAFPQVR	GLHHQLQSAFPQVR	4	GLHHQLQSAFPQVR4	8320.92		11236.7
G3V8Z6	G3V8Z6	G3V8Z6_RAT	Krit1	KRIT1, ankyrin repeat containing	1	GLHLLNMETK	GLHLLNMETK	3	GLHLLNMETK3		1195.82	2810.11
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	GLHLNMAFISR	GLHLNMAFISR	2	GLHLNMAFISR2	5163.43	5863.3	5937.13
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	GLHLNMAFISR	GLHLNMAFISR	3	GLHLNMAFISR3	26832.9	18521.5	20292.9
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	GLHNVVYGIQR	GLHNVVYGIQR	3	GLHNVVYGIQR3	20668.6	9720.02	12816.1
Q63448	Q63448	ACOX3_RAT	Acox3	Peroxisomal acyl-coenzyme A oxidase 3	1	GLHSFLVQIR	GLHSFLVQIR	3	GLHSFLVQIR3	20482.3	20286	14621
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	GLHYDIQK	GLHYDIQK	2	GLHYDIQK2	8136.59	21023.1	7550.67
O88767	O88767	PARK7_RAT	Park7	Parkinson disease protein 7 homolog	1	GLIAAICAGPTALLAHEVGFGCK	GLIAAIC(UniMod:4)AGPTALLAHEVGFGC(UniMod:4)K	3	GLIAAIC(UniMod:4)AGPTALLAHEVGFGC(UniMod:4)K3	7091.56	9661.61	8194.31
A0A8I5XWV4	A0A8I5XWV4	A0A8I5XWV4_RAT	Tm6sf1	Transmembrane 6 superfamily member 1	1	GLIALDCPAELCR	GLIALDC(UniMod:4)PAELC(UniMod:4)R	2	GLIALDC(UniMod:4)PAELC(UniMod:4)R2	5183.41	7932.11	7042.67
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	GLIDEANQDFTNR	GLIDEANQDFTNR	2	GLIDEANQDFTNR2	4.0261e+07	3.49429e+07	4.30426e+07
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	GLIDEANQDFTNR	GLIDEANQDFTNR	3	GLIDEANQDFTNR3	2.94638e+06	3.00527e+06	3.48975e+06
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	GLIDEANQDFTNRINK	GLIDEANQDFTNRINK	3	GLIDEANQDFTNRINK3	40818.6	24487.9	27242.3
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	GLIDEANQDFTNRINKLK	GLIDEANQDFTNRINKLK	3	GLIDEANQDFTNRINKLK3	14878.3	8317.64	20581.3
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	GLIDEANQDFTNRINKLK	GLIDEANQDFTNRINKLK	4	GLIDEANQDFTNRINKLK4	5045.47	4069.27	5982.16
Q9Z1K9	Q9Z1K9	ADA17_RAT	Adam17	Disintegrin and metalloproteinase domain-containing protein 17	1	GLIDREPSEEFVR	GLIDREPSEEFVR	3	GLIDREPSEEFVR3	10451.7		9227.43
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	GLIDTLR	GLIDTLR	2	GLIDTLR2	22714.8	23390.9	22925.7
Q0D2L6	Q0D2L6;B2RZ38	Q0D2L6_RAT	Rragc	Ras-related GTP-binding protein	0	GLIDYNFHCFR	GLIDYNFHC(UniMod:4)FR	2	GLIDYNFHC(UniMod:4)FR2	12489.4	4523.23	
Q0D2L6	Q0D2L6;B2RZ38	Q0D2L6_RAT	Rragc	Ras-related GTP-binding protein	0	GLIDYNFHCFR	GLIDYNFHC(UniMod:4)FR	3	GLIDYNFHC(UniMod:4)FR3	40565.3	25855.5	27919.7
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	GLIFNPR	GLIFNPR	2	GLIFNPR2	63086.7	86246.4	79161.6
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	GLIFYDTK	GLIFYDTK	2	GLIFYDTK2	7244.84		13228.6
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	GLIKEALENTDSATQMMILNCIYFK	GLIKEALENTDSATQMMILNC(UniMod:4)IYFK	3	GLIKEALENTDSATQMMILNC(UniMod:4)IYFK3		3834.91	
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	GLILDLLDK	GLILDLLDK	2	GLILDLLDK2	56284.9	41050	28632.1
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	GLILHYYSER	GLILHYYSER	2	GLILHYYSER2	26280	27072.5	15600
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	GLILHYYSER	GLILHYYSER	3	GLILHYYSER3	349454	406418	348638
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	GLILHYYSEREGLQDIVIGIIK	GLILHYYSEREGLQDIVIGIIK	4	GLILHYYSEREGLQDIVIGIIK4	9127.88	9929.69	9832.82
A0A8I6G6W8	A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	1	GLIPAGTQHGMMATTGK	GLIPAGTQHGMMATTGK	3	GLIPAGTQHGMMATTGK3		3490.75	3845.93
A0A8I6ATH0	A0A8I6ATH0	A0A8I6ATH0_RAT	Braf	non-specific serine/threonine protein kinase	1	GLIPECCAVYR	GLIPEC(UniMod:4)C(UniMod:4)AVYR	2	GLIPEC(UniMod:4)C(UniMod:4)AVYR2	82169.6	69925.6	70951.1
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	GLIPQLIGVAPEK	GLIPQLIGVAPEK	2	GLIPQLIGVAPEK2	122221	108974	112889
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	GLIPQNYVK	GLIPQNYVK	2	GLIPQNYVK2	31382	39912.2	32998.2
D3ZYT8	D3ZYT8	D3ZYT8_RAT	Pikfyve	1-phosphatidylinositol-3-phosphate 5-kinase	1	GLIPSDVLWPTK	GLIPSDVLWPTK	2	GLIPSDVLWPTK2	10348.6	15716.6	21776.3
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	GLISPEDFAQLQK	GLISPEDFAQLQK	2	GLISPEDFAQLQK2	21843.9	32051.9	24582
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	GLISSDGFCR	GLISSDGFC(UniMod:4)R	2	GLISSDGFC(UniMod:4)R2	6169.76	10958.3	14651.8
D4ACN8	D4ACN8	PLRKT_RAT	Plgrkt	Plasminogen receptor (KT)	1	GLITFESLEK	GLITFESLEK	2	GLITFESLEK2	143522	157117	159929
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	GLITGIGYEVLVSGFTQGHQTK	GLITGIGYEVLVSGFTQGHQTK	3	GLITGIGYEVLVSGFTQGHQTK3	21112.2	12835.4	11260.7
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	GLITGIGYEVLVSGFTQGHQTKPLR	GLITGIGYEVLVSGFTQGHQTKPLR	3	GLITGIGYEVLVSGFTQGHQTKPLR3	13750.5	14135.9	7236.58
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	GLITGIGYEVLVSGFTQGHQTKPLR	GLITGIGYEVLVSGFTQGHQTKPLR	4	GLITGIGYEVLVSGFTQGHQTKPLR4	48859.5	78667.2	59073.6
F1M1L9	F1M1L9	F1M1L9_RAT	Cpne2	Copine 2	1	GLITIAAQELSDNR	GLITIAAQELSDNR	2	GLITIAAQELSDNR2		13063	7919.55
A0A0G2JZH8	A0A0G2JZH8	A0A0G2JZH8_RAT	Pdhx	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	GLITPIIK	GLITPIIK	2	GLITPIIK2	35061.4	34873.5	43565.1
Q6AYG5	Q6AYG5	ECHD1_RAT	Echdc1	Ethylmalonyl-CoA decarboxylase	1	GLIVHGAK	GLIVHGAK	2	GLIVHGAK2	8937.34	13375.9	6243.22
B2GV15	B2GV15	B2GV15_RAT	Dbt	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	GLIVPNVK	GLIVPNVK	2	GLIVPNVK2	25636.1	14659.5	22974
Q6AXY8	Q6AXY8	Q6AXY8_RAT	Dhrs1	Dehydrogenase/reductase 1	1	GLIVVVSSPGGLQHMFNVPYGVGK	GLIVVVSSPGGLQHMFNVPYGVGK	3	GLIVVVSSPGGLQHMFNVPYGVGK3	3853.6	3695.5	3951.14
D3ZRX9	D3ZRX9	D3ZRX9_RAT	Cnn2	Calponin	1	GLKDGVILCTLMNK	GLKDGVILC(UniMod:4)TLMNK	3	GLKDGVILC(UniMod:4)TLMNK3	12752.1	19841.5	16085.5
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	GLKPGSCYCK	GLKPGSC(UniMod:4)YC(UniMod:4)K	2	GLKPGSC(UniMod:4)YC(UniMod:4)K2	10852.5	8036.63	5890.26
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	GLKPGSCYCK	GLKPGSC(UniMod:4)YC(UniMod:4)K	3	GLKPGSC(UniMod:4)YC(UniMod:4)K3	15282.7	12629.4	17997.2
D3ZQ80	D3ZQ80	D3ZQ80_RAT	Smg8	Nonsense-mediated mRNA decay factor SMG8	1	GLKPHYAQLMR	GLKPHYAQLMR	3	GLKPHYAQLMR3	2223.93		
Q3B7D5	Q3B7D5	RASF2_RAT	Rassf2	Ras association domain-containing protein 2	1	GLKPVQEDTPQLMR	GLKPVQEDTPQLMR	3	GLKPVQEDTPQLMR3	8323.23	4712.97	9770.59
P15127	P15127	INSR_RAT	Insr	Insulin receptor	1	GLKPWTQYAIFVK	GLKPWTQYAIFVK	3	GLKPWTQYAIFVK3	4404.9	1038.91	1113.01
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	GLLAEQR	GLLAEQR	2	GLLAEQR2	20161	17317.9	16280.5
A0A8I5ZM01	A0A8I5ZM01	A0A8I5ZM01_RAT	Evi5	Ecotropic viral integration site 5	1	GLLAQLSEAK	GLLAQLSEAK	2	GLLAQLSEAK2		6616.25	6655.56
F7EUW3	F7EUW3	F7EUW3_RAT	C2cd2l	C2CD2-like	1	GLLASLFAFK	GLLASLFAFK	2	GLLASLFAFK2	27815.8	23130.4	31252.8
Q5XFW6	Q5XFW6	WDR6_RAT	Wdr6	WD repeat-containing protein 6	1	GLLATASEDR	GLLATASEDR	2	GLLATASEDR2	11903.2	11452.7	15721.9
Q3T1I9	Q3T1I9	RPAP1_RAT	Rpap1	RNA polymerase II-associated protein 1	1	GLLATNLLPR	GLLATNLLPR	2	GLLATNLLPR2		4980.14	
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	GLLATSGNDGTIR	GLLATSGNDGTIR	2	GLLATSGNDGTIR2	12212.9	5572.22	5541.73
P32089	P32089	TXTP_RAT	Slc25a1	Tricarboxylate transport protein, mitochondrial	1	GLLCGLGAGVAEAVVVVCPMETVK	GLLC(UniMod:4)GLGAGVAEAVVVVC(UniMod:4)PMETVK	3	GLLC(UniMod:4)GLGAGVAEAVVVVC(UniMod:4)PMETVK3	6834.31		5461.92
D3ZH41	D3ZH41	D3ZH41_RAT	Ckap4	Cytoskeleton-associated protein 4	1	GLLDDLR	GLLDDLR	2	GLLDDLR2	51012.7	39315.7	42426.8
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	GLLDDWAGK	GLLDDWAGK	2	GLLDDWAGK2	72698.8	77407.5	63235.6
D3ZYF5	D3ZYF5	D3ZYF5_RAT	Trim58	Tripartite motif-containing 58	1	GLLDFAVAAR	GLLDFAVAAR	2	GLLDFAVAAR2	15846.6	10517.9	19530.7
Q9QWG5	Q9QWG5	INP4B_RAT	Inpp4b	Type II inositol 3,4-bisphosphate 4-phosphatase	1	GLLDNLHQNIQAK	GLLDNLHQNIQAK	3	GLLDNLHQNIQAK3	18187.5	16361.7	23067.2
Q6PEC4	Q6PEC4	SKP1_RAT	Skp1	S-phase kinase-associated protein 1	1	GLLDVTCK	GLLDVTC(UniMod:4)K	2	GLLDVTC(UniMod:4)K2	314228	273622	283232
Q63493	Q63493	CD1D_RAT	Cd1d	Antigen-presenting glycoprotein CD1d	1	GLLEAGKPDLEK	GLLEAGKPDLEK	2	GLLEAGKPDLEK2	4999.75	5833.85	12110.9
Q63493	Q63493	CD1D_RAT	Cd1d	Antigen-presenting glycoprotein CD1d	1	GLLEAGKPDLEK	GLLEAGKPDLEK	3	GLLEAGKPDLEK3	138068	108287	107935
P58200	P58200	VTI1B_RAT	Vti1b	Vesicle transport through interaction with t-SNAREs homolog 1B	1	GLLEDLQGVPER	GLLEDLQGVPER	2	GLLEDLQGVPER2	44151.1	36810.5	52690.5
P58200	P58200	VTI1B_RAT	Vti1b	Vesicle transport through interaction with t-SNAREs homolog 1B	1	GLLEDLQGVPER	GLLEDLQGVPER	3	GLLEDLQGVPER3	5995.17	4507.38	7733.25
A0A8I5ZKU9	A0A8I5ZKU9	A0A8I5ZKU9_RAT	Shmt1	Serine hydroxymethyltransferase	1	GLLEEDFQK	GLLEEDFQK	2	GLLEEDFQK2	10571.5	10439.6	9594.02
A9CMA6	A9CMA6	TM163_RAT	Tmem163	Transmembrane protein 163	1	GLLESSTR	GLLESSTR	2	GLLESSTR2	130626	127686	135987
Q66HA4	Q66HA4	TAXB1_RAT	Tax1bp1	Tax1-binding protein 1 homolog	1	GLLEVSQSLR	GLLEVSQSLR	2	GLLEVSQSLR2	11815.5	15289.2	16617.7
Q8R4S8	Q8R4S8	CRLF2_RAT	Crlf2	Cytokine receptor-like factor 2	1	GLLEVVLR	GLLEVVLR	2	GLLEVVLR2	5685.14	6920.99	
Q0ZHH6	Q6PST4;Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	0	GLLEYFK	GLLEYFK	1	GLLEYFK1	7502.84	3918.79	5788.07
Q0ZHH6	Q6PST4;Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	0	GLLEYFK	GLLEYFK	2	GLLEYFK2	377256	350940	365464
D3ZER6	D3ZER6	D3ZER6_RAT	Tnpo2	Transportin 2	1	GLLFHPEWVVK	GLLFHPEWVVK	3	GLLFHPEWVVK3	5314.52	4798.43	7640.25
Q99MS0	Q99MS0	S14L2_RAT	Sec14l2	SEC14-like protein 2	1	GLLFSASK	GLLFSASK	2	GLLFSASK2	41366.8	36777.1	28567.8
A0A0G2JXI6	A0A0G2JXI6	A0A0G2JXI6_RAT	Cyrib	CYFIP related Rac1 interactor B	1	GLLGALTSTPYSPTQHLER	GLLGALTSTPYSPTQHLER	3	GLLGALTSTPYSPTQHLER3	29763.6	15207.6	19808.9
Q9WTV5	Q9WTV5	PSMD9_RAT	Psmd9	26S proteasome non-ATPase regulatory subunit 9	1	GLLGCNITPLQR	GLLGC(UniMod:4)NITPLQR	2	GLLGC(UniMod:4)NITPLQR2	63408.1	53099.3	58534.1
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	GLLGNPICSPEYWK	GLLGNPIC(UniMod:4)SPEYWK	2	GLLGNPIC(UniMod:4)SPEYWK2	46564.4	33902.4	44528.1
A0A8I6A371	A0A8I6A371	A0A8I6A371_RAT	Nmi	N-myc (and STAT) interactor	1	GLLHEIMR	GLLHEIMR	2	GLLHEIMR2	26509.7	17368.1	18379.2
B1WBZ6	B1WBZ6	B1WBZ6_RAT	RGD1565685	RGD1565685 protein	1	GLLIAVPGLGPQATCR	GLLIAVPGLGPQATC(UniMod:4)R	2	GLLIAVPGLGPQATC(UniMod:4)R2	50557.7	36007	23911.2
P37727	P37727	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	1	GLLIDLLIK	GLLIDLLIK	2	GLLIDLLIK2	4098.18	7670.84	8143.28
P08650	P08650	CO5_RAT	C5	Complement C5	1	GLLIGEFLSTVLSK	GLLIGEFLSTVLSK	3	GLLIGEFLSTVLSK3	31604.5		
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	GLLLFVDEADAFLRK	GLLLFVDEADAFLRK	3	GLLLFVDEADAFLRK3	4779.08	3157.01	4208.09
A0A8I5ZNG4	A0A8I5ZNG4	A0A8I5ZNG4_RAT	Rictor	RPTOR independent companion of MTOR, complex 2	1	GLLLLLR	GLLLLLR	2	GLLLLLR2	4871.37	7774.42	2136.81
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	GLLLPPPMK	GLLLPPPMK	2	GLLLPPPMK2	150065	145513	160955
D3ZE36	D3ZE36	D3ZE36_RAT	B3gnt8	Hexosyltransferase	1	GLLLVHPVSPQDTIWLWR	GLLLVHPVSPQDTIWLWR	3	GLLLVHPVSPQDTIWLWR3	5573.66		
A0A8I6A2A6	F1M5A4;A0A8I6A2A6	A0A8I6A2A6_RAT	Spata5	Spermatogenesis associated 5	0	GLLLYGPPGTGK	GLLLYGPPGTGK	2	GLLLYGPPGTGK2	3.51273e+06	3.55158e+06	
P04182	P04182	OAT_RAT	Oat	Ornithine aminotransferase, mitochondrial	1	GLLNAIVIR	GLLNAIVIR	2	GLLNAIVIR2	11776.6	11510.2	13536
A0A8I5Y652	A0A8I5Y652	A0A8I5Y652_RAT	Tacc3	Transforming, acidic coiled-coil containing protein 3	1	GLLPAEPIVDVLK	GLLPAEPIVDVLK	2	GLLPAEPIVDVLK2	7163.36	6921.29	13150.2
P13803	P13803	ETFA_RAT	Etfa	Electron transfer flavoprotein subunit alpha, mitochondrial	1	GLLPEELTPLILETQK	GLLPEELTPLILETQK	2	GLLPEELTPLILETQK2	50861.2	66598	78019.6
P13803	P13803	ETFA_RAT	Etfa	Electron transfer flavoprotein subunit alpha, mitochondrial	1	GLLPEELTPLILETQK	GLLPEELTPLILETQK	3	GLLPEELTPLILETQK3	8647.19	12597	10251.2
A0A0G2K2M3	A0A0G2K2M3	A0A0G2K2M3_RAT	Stat6	Signal transducer and activator of transcription	1	GLLPEHFLFLAQK	GLLPEHFLFLAQK	3	GLLPEHFLFLAQK3	7886.17	10414.2	9575.02
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	GLLPGCMYHVQLK	GLLPGC(UniMod:4)MYHVQLK	2	GLLPGC(UniMod:4)MYHVQLK2		1888.77	
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	GLLPGCMYHVQLK	GLLPGC(UniMod:4)MYHVQLK	3	GLLPGC(UniMod:4)MYHVQLK3	63806	71281.3	71710.2
D4A2N2	D4A2N2	D4A2N2_RAT	Inpp5b	phosphoinositide 5-phosphatase	1	GLLPLDQSSGAR	GLLPLDQSSGAR	2	GLLPLDQSSGAR2	29378.6	33789.9	36458.6
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	GLLPMATR	GLLPMATR	2	GLLPMATR2	84312.8	91682	76612.1
A0A8I6ABE7	A0A8I6ABE7	A0A8I6ABE7_RAT	Xpr1	Xenotropic and polytropic retrovirus receptor 1	1	GLLPNDPQEPEFCHGYTYGVR	GLLPNDPQEPEFC(UniMod:4)HGYTYGVR	3	GLLPNDPQEPEFC(UniMod:4)HGYTYGVR3	2164.39		
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	GLLPQLLGVAPEK	GLLPQLLGVAPEK	2	GLLPQLLGVAPEK2	305716	285001	264973
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	GLLQAAQDK	GLLQAAQDK	2	GLLQAAQDK2	9426.68	6593.75	8836.26
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	GLLQCMMR	GLLQC(UniMod:4)MMR	2	GLLQC(UniMod:4)MMR2	11570	8896.03	10721.5
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	GLLQLQWK	GLLQLQWK	2	GLLQLQWK2	214448	78495	151624
Q09325	Q09325	MGAT1_RAT	Mgat1	Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	1	GLLQQIK	GLLQQIK	2	GLLQQIK2	14325.6	17485.6	18199.3
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	GLLQQVPNAHK	GLLQQVPNAHK	2	GLLQQVPNAHK2	5105.42		2296.36
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	GLLQQVPNAHK	GLLQQVPNAHK	3	GLLQQVPNAHK3	11563.1	9486.89	
P84817	P84817	FIS1_RAT	Fis1	Mitochondrial fission 1 protein	1	GLLQTEPQNNQAK	GLLQTEPQNNQAK	2	GLLQTEPQNNQAK2	208528	137907	177109
G3V8G1	G3V8G1	G3V8G1_RAT	Agtpbp1	tubulin-glutamate carboxypeptidase	1	GLLQYLAAVK	GLLQYLAAVK	2	GLLQYLAAVK2	1235.92		1452.76
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	GLLRPHVPPAAITTLAR	GLLRPHVPPAAITTLAR	4	GLLRPHVPPAAITTLAR4	8442	9675.67	11965.3
F7EVW7	F7EVW7	F7EVW7_RAT	Gpaa1	Glycosylphosphatidylinositol anchor attachment 1	1	GLLSDPVR	GLLSDPVR	2	GLLSDPVR2		8148.3	6499.08
B1H257	B1H257	B1H257_RAT	Borcs5	BLOC-1-related complex subunit 5	1	GLLSGQTSPTNAR	GLLSGQTSPTNAR	2	GLLSGQTSPTNAR2	19307.6	18296.5	17364
P37996	P37996	ARL3_RAT	Arl3	ADP-ribosylation factor-like protein 3	1	GLLSILR	GLLSILR	2	GLLSILR2	9505.46	2559.63	5248.95
D3ZGL3	D3ZGL3	D3ZGL3_RAT	Hhip	Hedgehog-interacting protein	1	GLLSLAFHPNYK	GLLSLAFHPNYK	3	GLLSLAFHPNYK3	1998.85	1931.82	2937.19
A0A8I6AU21	A0A8I6AU21	A0A8I6AU21_RAT	Ccdc28a	Coiled-coil domain containing 28A	1	GLLSLLNDFHSGK	GLLSLLNDFHSGK	3	GLLSLLNDFHSGK3	3821.03	5722.49	3771.91
B0BNN3	B0BNN3	CAH1_RAT	Ca1	Carbonic anhydrase 1	1	GLLSSAEGEPAVPVLSNHRPPQPLK	GLLSSAEGEPAVPVLSNHRPPQPLK	4	GLLSSAEGEPAVPVLSNHRPPQPLK4	23858.3	17438.8	18982.7
Q920F5	Q920F5	DCMC_RAT	Mlycd	Malonyl-CoA decarboxylase, mitochondrial	1	GLLSSGEWAK	GLLSSGEWAK	2	GLLSSGEWAK2	14162.6	18534.8	18827.9
D3ZFQ8	D3ZFQ8	D3ZFQ8_RAT	Cyc1	Cytochrome c-1	1	GLLSSLDHTSIR	GLLSSLDHTSIR	2	GLLSSLDHTSIR2	22931.4	19431.7	9950.47
D3ZFQ8	D3ZFQ8	D3ZFQ8_RAT	Cyc1	Cytochrome c-1	1	GLLSSLDHTSIR	GLLSSLDHTSIR	3	GLLSSLDHTSIR3	196544	256906	225934
D3ZFQ8	D3ZFQ8	D3ZFQ8_RAT	Cyc1	Cytochrome c-1	1	GLLSSLDHTSIRR	GLLSSLDHTSIRR	3	GLLSSLDHTSIRR3	64100.6	60845.5	64781.8
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	GLLSTEIGR	GLLSTEIGR	2	GLLSTEIGR2	27836.7	24621.9	23927.3
P46844	P46844	BIEA_RAT	Blvra	Biliverdin reductase A	1	GLLSWIEEK	GLLSWIEEK	2	GLLSWIEEK2	5129.22	6240.36	8192.16
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GLLTFETSSALGPQMSATVQLDSK	GLLTFETSSALGPQMSATVQLDSK	3	GLLTFETSSALGPQMSATVQLDSK3	109330	107112	96859.3
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GLLTFETSSALGPQMSATVQLDSKK	GLLTFETSSALGPQMSATVQLDSKK	3	GLLTFETSSALGPQMSATVQLDSKK3	20263.8	38573	42652.6
O08697	O08697	ARL2_RAT	Arl2	ADP-ribosylation factor-like protein 2	1	GLLTILKK	GLLTILKK	2	GLLTILKK2	2250.5	4175.38	5429.25
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	GLLTIPMDNTEVAQWLR	GLLTIPMDNTEVAQWLR	2	GLLTIPMDNTEVAQWLR2	20628.3	17149.5	24297.9
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	GLLTIPMDNTEVAQWLR	GLLTIPMDNTEVAQWLR	3	GLLTIPMDNTEVAQWLR3	2209.98	4681.8	3771.86
F1LQ27	F1LQ27	F1LQ27_RAT	Fam98c	Family with sequence similarity 98, member C	1	GLLTPESDVSTAHVLAAR	GLLTPESDVSTAHVLAAR	3	GLLTPESDVSTAHVLAAR3	9567.61	11242.7	4035.06
B1WC29	B1WC29	B1WC29_RAT	Ankrd49	Ankrd49 protein	1	GLLTPLHLAAGNR	GLLTPLHLAAGNR	3	GLLTPLHLAAGNR3	2407.46		2785.59
D3ZSB7	D3ZSB7	D3ZSB7_RAT	Rps6ka4	Ribosomal protein S6 kinase	1	GLLTVDPAK	GLLTVDPAK	2	GLLTVDPAK2	3004.93		4874.41
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	GLLTYTSWEDALSR	GLLTYTSWEDALSR	2	GLLTYTSWEDALSR2	25768.4	31562.3	25938.3
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	GLLVAHLHEHK	GLLVAHLHEHK	3	GLLVAHLHEHK3	23313.2		19472.8
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	GLLVEPAANSYLLAER	GLLVEPAANSYLLAER	2	GLLVEPAANSYLLAER2	15220	13011.3	11164.3
Q64350	Q64350	EI2BE_RAT	Eif2b5	Translation initiation factor eIF-2B subunit epsilon	1	GLLVNEEILGNQIHLHVTSR	GLLVNEEILGNQIHLHVTSR	3	GLLVNEEILGNQIHLHVTSR3	5118.66	8792.36	6378.62
Q64350	Q64350	EI2BE_RAT	Eif2b5	Translation initiation factor eIF-2B subunit epsilon	1	GLLVNEEILGNQIHLHVTSR	GLLVNEEILGNQIHLHVTSR	4	GLLVNEEILGNQIHLHVTSR4	17218.5	10106.9	9832.08
O08658	O08658	NUP88_RAT	Nup88	Nuclear pore complex protein Nup88	1	GLMALELPQR	GLMALELPQR	2	GLMALELPQR2	2995.88	4256.77	5322.6
A0A0G2K1A2	D3ZSY4;A0A0G2K1A2	A0A0G2K1A2_RAT	Mpo	Myeloperoxidase	0	GLMATPAK	GLMATPAK	2	GLMATPAK2	68505.3	33728.1	34105.2
Q02589	Q02589	ADPRH_RAT	Adprh	ADP-ribosylhydrolase ARH1	1	GLMEVLPEAK	GLMEVLPEAK	2	GLMEVLPEAK2	11018.7	13515.1	19767
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	GLMNHYINK	GLMNHYINK	2	GLMNHYINK2	2.78073e+06	2.43182e+06	2.58007e+06
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	GLMNHYINKETEGK	GLMNHYINKETEGK	2	GLMNHYINKETEGK2	12377.2	11039.2	16585.7
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	GLMNHYINKETEGK	GLMNHYINKETEGK	3	GLMNHYINKETEGK3	210703	372072	410786
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	GLMNHYINKETEGK	GLMNHYINKETEGK	4	GLMNHYINKETEGK4	94441.6	151189	236005
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	GLMNHYINKETEGKIPK	GLMNHYINKETEGKIPK	4	GLMNHYINKETEGKIPK4	13692.7	5482.82	19439.3
P12711	P12711	ADHX_RAT	Adh5	Alcohol dehydrogenase class-3	1	GLMPDGTSR	GLMPDGTSR	2	GLMPDGTSR2	38556.4	46344.1	46806
D4ADQ1	Q4KLN6;D4ADQ1	D4ADQ1_RAT	Rrm2b	Ribonucleotide reductase regulatory TP53 inducible subunit M2B	0	GLMPGLTFSNELISR	GLMPGLTFSNELISR	2	GLMPGLTFSNELISR2	13491.2	22745	20492.9
D3ZFQ3	D3ZFQ3	D3ZFQ3_RAT	Nubpl	Nucleotide binding protein-like	1	GLMVMSAIEK	GLMVMSAIEK	2	GLMVMSAIEK2	2041.77	2992.44	2103.47
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	GLMVSLSTDDPLQFHFTK	GLMVSLSTDDPLQFHFTK	3	GLMVSLSTDDPLQFHFTK3	28500.7	36046.8	23645
A0A0G2K3L8	A0A0G2K3L8	A0A0G2K3L8_RAT	Wdfy1	WD repeat and FYVE domain containing 1	1	GLMVTCGTDR	GLMVTC(UniMod:4)GTDR	2	GLMVTC(UniMod:4)GTDR2	17801.6	12790.3	21729.1
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	GLMYPYIFHVLTK	GLMYPYIFHVLTK	2	GLMYPYIFHVLTK2	9736.42	20105.8	20932.5
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	GLMYPYIFHVLTK	GLMYPYIFHVLTK	3	GLMYPYIFHVLTK3	28122.7	19896.9	36531.7
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	GLMYQWIEQDMEK	GLMYQWIEQDMEK	2	GLMYQWIEQDMEK2	24730.1	21783.8	22044.5
F1M9D6	F1M9D6	F1M9D6_RAT	Stat1	Signal transducer and activator of transcription	1	GLNADQLSMLGEK	GLNADQLSMLGEK	2	GLNADQLSMLGEK2	2562.96	3499.76	
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	GLNCELCMDFYHDLPWRPAEGR	GLNC(UniMod:4)ELC(UniMod:4)MDFYHDLPWRPAEGR	3	GLNC(UniMod:4)ELC(UniMod:4)MDFYHDLPWRPAEGR3	9958.69	4977.06	11707.4
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	GLNCELCMDFYHDLPWRPAEGR	GLNC(UniMod:4)ELC(UniMod:4)MDFYHDLPWRPAEGR	4	GLNC(UniMod:4)ELC(UniMod:4)MDFYHDLPWRPAEGR4	38856.1	34575.3	33397.7
A0A8I5ZRV3	A0A8I5ZRV3	A0A8I5ZRV3_RAT	Fam3a	FAM3 metabolism regulating signaling molecule A	1	GLNIALVNGVSGELLEAR	GLNIALVNGVSGELLEAR	2	GLNIALVNGVSGELLEAR2	5996.01		
A0A0G2K1L5	A0A0G2K1L5	A0A0G2K1L5_RAT	Reep2	Receptor expression-enhancing protein	1	GLNLAANAAVTAAAK	GLNLAANAAVTAAAK	2	GLNLAANAAVTAAAK2	13146.8	9196.22	7116.22
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	GLNLDFYEGHITAFLGHNGAGK	GLNLDFYEGHITAFLGHNGAGK	4	GLNLDFYEGHITAFLGHNGAGK4	2029.17		3450.28
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	GLNLGLALDHALR	GLNLGLALDHALR	3	GLNLGLALDHALR3	15407.4	12085	18121.7
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	GLNLTTPGESDGFCANR	GLNLTTPGESDGFC(UniMod:4)ANR	2	GLNLTTPGESDGFC(UniMod:4)ANR2	145768	156715	140290
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	GLNLTTPGESDGFCANR	GLNLTTPGESDGFC(UniMod:4)ANR	3	GLNLTTPGESDGFC(UniMod:4)ANR3	9835.65	6488.88	7717.16
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	GLNMAATFLGNNTAIQELFTR	GLNMAATFLGNNTAIQELFTR	3	GLNMAATFLGNNTAIQELFTR3	75308.9	80776.2	68560.9
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	GLNMAATFLGNNTAIQELFTR	GLNMAATFLGNNTAIQELFTR	4	GLNMAATFLGNNTAIQELFTR4	3356.57	6228.98	3807.02
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	GLNSVATAR	GLNSVATAR	2	GLNSVATAR2	40864.6	37104	26334.3
E9PT90	E9PT90	E9PT90_RAT	Spart	Spartin	1	GLNTDELGQK	GLNTDELGQK	2	GLNTDELGQK2	12115.6	10493	14644
E9PT90	E9PT90	E9PT90_RAT	Spart	Spartin	1	GLNTDELGQKEEAK	GLNTDELGQKEEAK	3	GLNTDELGQKEEAK3	11206.1	12814	11111.3
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	GLNVAEVQK	GLNVAEVQK	2	GLNVAEVQK2	31120.6	18774	24051.6
Q10473	Q10473	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	1	GLPAGDVLELVQKPHEGPGEMGKPVVIPK	GLPAGDVLELVQKPHEGPGEMGKPVVIPK	4	GLPAGDVLELVQKPHEGPGEMGKPVVIPK4	5306.29	6283.91	8151.94
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	GLPAPGPGPTDK	GLPAPGPGPTDK	2	GLPAPGPGPTDK2	454986	448631	580408
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	GLPAPGPGPTDKK	GLPAPGPGPTDKK	2	GLPAPGPGPTDKK2	66504.4	38522.6	51683
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	GLPAPGPGPTDKK	GLPAPGPGPTDKK	3	GLPAPGPGPTDKK3	74958.3	96502.4	97961.8
Q9ESS6	Q9ESS6	BCAM_RAT	Bcam	Basal cell adhesion molecule	1	GLPAPIVR	GLPAPIVR	2	GLPAPIVR2	6620.5	6317.22	8925.88
Q5XI97	Q5XI97	AASD1_RAT	Aarsd1	Alanyl-tRNA editing protein Aarsd1	1	GLPDDHAGPIR	GLPDDHAGPIR	3	GLPDDHAGPIR3	19599.3	21511.4	28582.4
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	GLPDLIDETR	GLPDLIDETR	2	GLPDLIDETR2	8534.58		6942.59
Q5FWS5	Q5FWS5	Q5FWS5_RAT	Loxl1	Lysyl oxidase homolog	1	GLPDLVPDPNYVQASTYVQR	GLPDLVPDPNYVQASTYVQR	3	GLPDLVPDPNYVQASTYVQR3	60428.7	45782.3	52044.2
A0A0G2K542	A0A0G2K542	A0A0G2K542_RAT	Ugp2	UTP--glucose-1-phosphate uridylyltransferase	1	GLPDNISSVLNK	GLPDNISSVLNK	2	GLPDNISSVLNK2	109868	81910.3	66158.6
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	GLPELVEFYQQNSLK	GLPELVEFYQQNSLK	3	GLPELVEFYQQNSLK3	6895.2	6802.43	7464.45
Q794E4	Q794E4;A0A8I5ZW75	HNRPF_RAT	Hnrnpf	Heterogeneous nuclear ribonucleoprotein F	0	GLPFGCTK	GLPFGC(UniMod:4)TK	2	GLPFGC(UniMod:4)TK2	65261.7	65109.5	50347.9
M0R7D2	M0R7D2	M0R7D2_RAT	Alg3	Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase	1	GLPGSVVQPAGIWK	GLPGSVVQPAGIWK	2	GLPGSVVQPAGIWK2	16219.1	20698.7	35604.8
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	GLPLFPLVKPHINFMAAK	GLPLFPLVKPHINFMAAK	4	GLPLFPLVKPHINFMAAK4	1707.56	4274.94	7144.15
Q5QE80	Q5QE80	AOXC_RAT	Aox3	Aldehyde oxidase 3	1	GLPLILAINSPATAEVIR	GLPLILAINSPATAEVIR	2	GLPLILAINSPATAEVIR2	2109.67		4184.6
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	GLPLVDDGGWNTVPISK	GLPLVDDGGWNTVPISK	2	GLPLVDDGGWNTVPISK2	104357	130406	134015
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	GLPLVDDGGWNTVPISK	GLPLVDDGGWNTVPISK	3	GLPLVDDGGWNTVPISK3	9649.43	10439.9	16116.7
P41562	P41562	IDHC_RAT	Idh1	Isocitrate dehydrogenase [NADP] cytoplasmic	1	GLPNVQR	GLPNVQR	2	GLPNVQR2	27673.9	36411.2	38559.4
M0R5F1	M0R5F1	M0R5F1_RAT	Aspn	Asporin	1	GLPPTLLELHLDFNK	GLPPTLLELHLDFNK	3	GLPPTLLELHLDFNK3	52912.9	58232.4	36964.5
Q06486	Q06486	KC1D_RAT	Csnk1d	Casein kinase I isoform delta	1	GLPSTASGR	GLPSTASGR	2	GLPSTASGR2	5921.09	8278.34	
P20673	P20673	ARLY_RAT	Asl	Argininosuccinate lyase	1	GLPSTYNK	GLPSTYNK	2	GLPSTYNK2	38207	25163.3	28300.1
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	GLPVEIEDEEPEPPPAIPR	GLPVEIEDEEPEPPPAIPR	3	GLPVEIEDEEPEPPPAIPR3	46884.5	45353.8	42599.4
G3V8E2	G3V8E2;A0A8I6G7M4	G3V8E2_RAT	Strip1	Striatin interacting protein 1	0	GLPWAPK	GLPWAPK	2	GLPWAPK2	196231	191765	195766
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	GLPWQGEDPRR	GLPWQGEDPRR	3	GLPWQGEDPRR3	127169	144015	120597
Q8VHV7	Q8VHV7	HNRH1_RAT	Hnrnph1	Heterogeneous nuclear ribonucleoprotein H	1	GLPWSCSADEVQR	GLPWSC(UniMod:4)SADEVQR	2	GLPWSC(UniMod:4)SADEVQR2	22473.4	19126	21839.8
Q6AY09	Q6AY09	HNRH2_RAT	Hnrnph2	Heterogeneous nuclear ribonucleoprotein H2	1	GLPWSCSAEEVMR	GLPWSC(UniMod:4)SAEEVMR	2	GLPWSC(UniMod:4)SAEEVMR2	15968.5	24490.6	19174.1
Q6AYQ8	Q6AYQ8	FAHD1_RAT	Fahd1	Acylpyruvase FAHD1, mitochondrial	1	GLPWTLAK	GLPWTLAK	2	GLPWTLAK2	20449.4	35138.1	31092.2
Q499P8	Q499P8	RUSF1_RAT	Rusf1	RUS family member 1	1	GLQAAGWK	GLQAAGWK	2	GLQAAGWK2	9636.19	8727.01	10868.1
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	GLQAFCSLR	GLQAFC(UniMod:4)SLR	2	GLQAFC(UniMod:4)SLR2	8269.53	5435.8	3305.2
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	GLQALLEER	GLQALLEER	2	GLQALLEER2	104016	112681	119318
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	GLQALSSPTLVLTGTQVYGR	GLQALSSPTLVLTGTQVYGR	3	GLQALSSPTLVLTGTQVYGR3	2.00518e+06	2.2638e+06	2.56176e+06
D3ZCD0	D3ZCD0	D3ZCD0_RAT	Tek	receptor protein-tyrosine kinase	1	GLQCNEACPYGHYGPDCK	GLQC(UniMod:4)NEAC(UniMod:4)PYGHYGPDC(UniMod:4)K	3	GLQC(UniMod:4)NEAC(UniMod:4)PYGHYGPDC(UniMod:4)K3	6982.85	10635.6	9708.59
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	GLQDALQGQELSLGEASK	GLQDALQGQELSLGEASK	2	GLQDALQGQELSLGEASK2	41805.7	31900	46085.1
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	GLQDALQGQELSLGEASK	GLQDALQGQELSLGEASK	3	GLQDALQGQELSLGEASK3	11147.4	11630.7	16538.4
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	GLQDHSASVDLDSSTSSTLSNTSK	GLQDHSASVDLDSSTSSTLSNTSK	3	GLQDHSASVDLDSSTSSTLSNTSK3	1751.1	4691.49	2823.98
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	GLQDSIR	GLQDSIR	2	GLQDSIR2	72819.8	45870.4	44612.2
F7ELS2	F7ELS2;Q6AYJ7;A0A8I6GM53	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	0	GLQDVLR	GLQDVLR	2	GLQDVLR2	203527	189897	202589
D4A453	D4A453	D4A453_RAT	Cdc34	Cell division cycle 34, ubiqiutin conjugating enzyme	1	GLQEEPVEGFR	GLQEEPVEGFR	2	GLQEEPVEGFR2	8845.87	8921.82	6974.45
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	GLQEGYENSR	GLQEGYENSR	2	GLQEGYENSR2	250438	275528	245569
D3ZPA1	D3ZPA1	D3ZPA1_RAT	Gcc1	GRIP and coiled-coil domain containing 1	1	GLQEQIAETK	GLQEQIAETK	2	GLQEQIAETK2	8231.35	9408.27	5406.71
A0A8I5ZZ05	A0A8I5ZZ05	A0A8I5ZZ05_RAT	Soga1	Suppressor of glucose, autophagy associated 1	1	GLQEQLSQER	GLQEQLSQER	2	GLQEQLSQER2	3564.49	2091.89	
Q4QQS7	Q4QQS7	Q4QQS7_RAT	Umps	Uridine 5'-monophosphate synthase	1	GLQEVGLPLHR	GLQEVGLPLHR	3	GLQEVGLPLHR3	5760.97	4294.61	7388.13
A0A8I5ZUE7	A0A8I5ZUE7	A0A8I5ZUE7_RAT	Zc3h7b	Zinc finger CCCH-type containing 7B	1	GLQFIQSTLPLK	GLQFIQSTLPLK	2	GLQFIQSTLPLK2	6588.87	8562.27	10971.4
Q9JIH7	A0A1W2Q671;Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	0	GLQFLHTR	GLQFLHTR	2	GLQFLHTR2	3470.98	2397.62	
Q8CIN9	Q8CIN9	RFFL_RAT	Rffl	E3 ubiquitin-protein ligase rififylin	1	GLQHLVSGNEDQNGGAVPSGLEENLCK	GLQHLVSGNEDQNGGAVPSGLEENLC(UniMod:4)K	3	GLQHLVSGNEDQNGGAVPSGLEENLC(UniMod:4)K3	29071.4	29669.1	31703.8
P47853	P47853	PGS1_RAT	Bgn	Biglycan	1	GLQHLYALVLVNNK	GLQHLYALVLVNNK	2	GLQHLYALVLVNNK2	16324.5	15726.8	12423
P47853	P47853	PGS1_RAT	Bgn	Biglycan	1	GLQHLYALVLVNNK	GLQHLYALVLVNNK	3	GLQHLYALVLVNNK3	65464.8	94396.8	67904.9
P15384	P63142;D3ZRW4;P10499;P15384	KCNA3_RAT	Kcna3	Potassium voltage-gated channel subfamily A member 3	0	GLQILGQTLK	GLQILGQTLK	2	GLQILGQTLK2	94191.7	67328.5	75903.6
A0A8I6GBD2	A0A8I6GBD2	A0A8I6GBD2_RAT	Actr10	Actin related protein 10	1	GLQIQAAK	GLQIQAAK	2	GLQIQAAK2	107301	114861	117979
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	GLQLDAQR	GLQLDAQR	2	GLQLDAQR2	103849	104620	102779
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	GLQLIAGK	GLQLIAGK	2	GLQLIAGK2	11183.5	9623.75	7154.04
D4ACK7	D4ACK7	D4ACK7_RAT	Cnnm3	Metal transporter	1	GLQLSALALAPAEVQVLR	GLQLSALALAPAEVQVLR	2	GLQLSALALAPAEVQVLR2	3010.89	1785.92	2989.87
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	GLQPCLR	GLQPC(UniMod:4)LR	2	GLQPC(UniMod:4)LR2	107173	114490	121052
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	GLQPEYEAQVK	GLQPEYEAQVK	2	GLQPEYEAQVK2	64906.7	70910	47505.8
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	GLQPLEFSDCYLDSPWFR	GLQPLEFSDC(UniMod:4)YLDSPWFR	3	GLQPLEFSDC(UniMod:4)YLDSPWFR3	10649.5	8746.9	7649.6
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	GLQPLQDGSDPDPYVK	GLQPLQDGSDPDPYVK	2	GLQPLQDGSDPDPYVK2	6631.09		5940.71
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	GLQQDNHLK	GLQQDNHLK	2	GLQQDNHLK2		152858	
F1LXA0	F1LXA0	F1LXA0_RAT	Ndufa12	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	1	GLQQVTGHGGLR	GLQQVTGHGGLR	2	GLQQVTGHGGLR2	3650.8	3565.06	3051.01
F1LXA0	F1LXA0	F1LXA0_RAT	Ndufa12	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	1	GLQQVTGHGGLR	GLQQVTGHGGLR	3	GLQQVTGHGGLR3	38647.6	42667.1	43146.5
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	GLQSFVQCQPFER	GLQSFVQC(UniMod:4)QPFER	2	GLQSFVQC(UniMod:4)QPFER2	17448.4	18901.4	7613.83
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	GLQSFVQCQPFER	GLQSFVQC(UniMod:4)QPFER	3	GLQSFVQC(UniMod:4)QPFER3	9877.11	14752	11715.9
D3ZRX9	D3ZRX9	D3ZRX9_RAT	Cnn2	Calponin	1	GLQSGVDIGVK	GLQSGVDIGVK	2	GLQSGVDIGVK2	886483	834635	820277
A0A0G2K1A4	A0A0G2K1A4	A0A0G2K1A4_RAT	Evi5l	Ecotropic viral integration site 5-like	1	GLQTQLSESR	GLQTQLSESR	2	GLQTQLSESR2	12454.2	17788.5	9464.3
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	GLQTQNSDWYLK	GLQTQNSDWYLK	2	GLQTQNSDWYLK2	41260.3	42789.8	46989.6
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	GLQTSQDAR	GLQTSQDAR	1	GLQTSQDAR1	9502.27		3487.79
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	GLQTSQDAR	GLQTSQDAR	2	GLQTSQDAR2	2.85497e+06		2.78708e+06
A0A8I6AUZ6	A0A8I6AUZ6	A0A8I6AUZ6_RAT	Rarres2	Retinoic acid receptor responder protein 2	1	GLQVALEEFHR	GLQVALEEFHR	3	GLQVALEEFHR3	16021.8	14565.5	8376.04
Q66H62	A0A8I6A0L1;Q66H62	CYLD_RAT	Cyld	Ubiquitin carboxyl-terminal hydrolase CYLD	0	GLQVDVGSPVR	GLQVDVGSPVR	2	GLQVDVGSPVR2	9381.19	6569.81	6151.55
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	GLQVLMGR	GLQVLMGR	2	GLQVLMGR2	149204	142502	133610
Q811U3	Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	1	GLRDLEEEIQMLK	GLRDLEEEIQMLK	3	GLRDLEEEIQMLK3		11167.5	4336.41
A0A8I5Y9A4	A0A8I5Y9A4	A0A8I5Y9A4_RAT	Ndufb3	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3	1	GLRDPWAR	GLRDPWAR	2	GLRDPWAR2	8574.84	21909	
P60203	P60203	MYPR_RAT	Plp1	Myelin proteolipid protein	1	GLSATVTGGQK	GLSATVTGGQK	2	GLSATVTGGQK2	8042.95	5558.94	7181.94
F1M332	F1M332	F1M332_RAT	Arhgap28	Rho GTPase activating protein 28	1	GLSDDDYLEK	GLSDDDYLEK	2	GLSDDDYLEK2	17117	13665.1	10871.4
Q4QQS6	Q4QQS6	Q4QQS6_RAT	Alg5	dolichyl-phosphate beta-glucosyltransferase	1	GLSDLQPWPEQMAIACGSR	GLSDLQPWPEQMAIAC(UniMod:4)GSR	3	GLSDLQPWPEQMAIAC(UniMod:4)GSR3	3117.52	3207.17	6393.81
P13383	P13383	NUCL_RAT	Ncl	Nucleolin	1	GLSEDTTEETLK	GLSEDTTEETLK	2	GLSEDTTEETLK2	6726.3	7134.29	
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	GLSFLFPLLK	GLSFLFPLLK	2	GLSFLFPLLK2	35159.6	5867.44	
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	GLSFSEATASALVK	GLSFSEATASALVK	2	GLSFSEATASALVK2	122680	113497	127193
Q80W57	Q80W57	ABCG2_RAT	Abcg2	Broad substrate specificity ATP-binding cassette transporter ABCG2	1	GLSGDVLINGAPQPANFK	GLSGDVLINGAPQPANFK	2	GLSGDVLINGAPQPANFK2	4054.62	5416.87	1731.95
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	GLSGFQEALNVTSHR	GLSGFQEALNVTSHR	2	GLSGFQEALNVTSHR2	19851.3	13142.3	5268.49
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	GLSGFQEALNVTSHR	GLSGFQEALNVTSHR	3	GLSGFQEALNVTSHR3	167262	162897	165295
Q566R4	Q566R4	LRA25_RAT	Fam89b	Leucine repeat adapter protein 25	1	GLSGLLNASGGSWR	GLSGLLNASGGSWR	2	GLSGLLNASGGSWR2	45353.2	41689.4	49096
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	GLSHVLNR	GLSHVLNR	2	GLSHVLNR2		5418.25	
Q9ESM0	Q9ESM0	IP6K1_RAT	Ip6k1	Inositol hexakisphosphate kinase 1	1	GLSIEGFR	GLSIEGFR	2	GLSIEGFR2	14270.5	15771.6	10246.5
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	GLSIEQLTTLAEK	GLSIEQLTTLAEK	2	GLSIEQLTTLAEK2	19182.3	18549.8	19490.7
D3ZZA8	D3ZZA8	D3ZZA8_RAT	Sec24a	SEC24 homolog A, COPII coat complex component	1	GLSIHTFHGNFFVR	GLSIHTFHGNFFVR	4	GLSIHTFHGNFFVR4	3821.53		
O08773	O08773	RGS14_RAT	Rgs14	Regulator of G-protein signaling 14	1	GLSLPDIK	GLSLPDIK	2	GLSLPDIK2	31938.1	21777.1	17430.7
Q63632	Q63633;G3V6N7;Q63632	S12A4_RAT	Slc12a4	Solute carrier family 12 member 4	0	GLSLSAAR	GLSLSAAR	2	GLSLSAAR2	25267.1	23945.8	25129.2
Q63313	Q63313	LBP_RAT	Lbp	Lipopolysaccharide-binding protein	1	GLSLSISDSSISVR	GLSLSISDSSISVR	2	GLSLSISDSSISVR2	33446	30551.8	32501.2
Q66H85	Q66H85	ANKZ1_RAT	Ankzf1	tRNA endonuclease ANKZF1	1	GLSLVSQAPGEALAWAPR	GLSLVSQAPGEALAWAPR	2	GLSLVSQAPGEALAWAPR2	4293.44	2497.97	
D3ZW15	D3ZW15	D3ZW15_RAT	Sec24b	SEC24 homolog B, COPII coat complex component	1	GLSMHTFHGNFFVR	GLSMHTFHGNFFVR	4	GLSMHTFHGNFFVR4	3189.06	2357.98	5476.09
Q4FZT2	Q4FZT2	PPME1_RAT	Ppme1	Protein phosphatase methylesterase 1	1	GLSNLFLSCPIPK	GLSNLFLSC(UniMod:4)PIPK	2	GLSNLFLSC(UniMod:4)PIPK2	24751.2	37336.4	35863.5
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	GLSPAQADSQFLENAK	GLSPAQADSQFLENAK	2	GLSPAQADSQFLENAK2	11938.6	10377.8	9281.96
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	GLSPAQADSQFLENAK	GLSPAQADSQFLENAK	3	GLSPAQADSQFLENAK3	3126.03		
Q71RP1	Q71RP1	HPSE_RAT	Hpse	Heparanase	1	GLSPAYLR	GLSPAYLR	2	GLSPAYLR2	203046	201557	192056
E9PST5	E9PST5	E9PST5_RAT	Acin1	Apoptotic chromatin condensation inducer 1	1	GLSPLSSTADTK	GLSPLSSTADTK	2	GLSPLSSTADTK2	9841.37	11893.9	16730.8
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	GLSQPGSSQHLSSSLPASCGDPEK	GLSQPGSSQHLSSSLPASC(UniMod:4)GDPEK	3	GLSQPGSSQHLSSSLPASC(UniMod:4)GDPEK3	25190.1	19099	20080.9
P62278	P62278;M0RCY2	RS13_RAT	Rps13	Small ribosomal subunit protein uS15	0	GLSQSALPYR	GLSQSALPYR	2	GLSQSALPYR2	15335.9	18043.8	13561.8
Q63678	Q63678	ZA2G_RAT	Azgp1	Zinc-alpha-2-glycoprotein	1	GLSQSLSVQWDEK	GLSQSLSVQWDEK	2	GLSQSLSVQWDEK2	15185.6	12930.9	13328.6
Q5FVF9	Q5FVF9	BTD_RAT	Btd	Biotinidase	1	GLSSGLVTAALYGR	GLSSGLVTAALYGR	2	GLSSGLVTAALYGR2	216750	153387	140167
Q5FVF9	Q5FVF9	BTD_RAT	Btd	Biotinidase	1	GLSSGLVTAALYGR	GLSSGLVTAALYGR	3	GLSSGLVTAALYGR3	9519.11	6593.56	15144.5
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	GLSSILDPAR	GLSSILDPAR	2	GLSSILDPAR2	22833	25793.6	13130.3
P32089	P32089	TXTP_RAT	Slc25a1	Tricarboxylate transport protein, mitochondrial	1	GLSSLLYGSIPK	GLSSLLYGSIPK	2	GLSSLLYGSIPK2	104997	99257.7	113942
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	GLSSLSLAK	GLSSLSLAK	2	GLSSLSLAK2	65222.8	69395.1	54214.8
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	GLSSWLGLK	GLSSWLGLK	2	GLSSWLGLK2	142124	147698	149881
G3V6U9	G3V6U9	SETD3_RAT	Setd3	Actin-histidine N-methyltransferase	1	GLSVTFDGK	GLSVTFDGK	2	GLSVTFDGK2	17994	18324.8	15058.4
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	GLSWQPPPYTPTPR	GLSWQPPPYTPTPR	2	GLSWQPPPYTPTPR2	42867.1	59498.3	34122.5
F7FBG3	F7FBG3	F7FBG3_RAT	Commd7	COMM domain containing 7	1	GLTAEQVR	GLTAEQVR	2	GLTAEQVR2	16254.5	16417.2	14674.9
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	GLTAIPANLPETMTEIR	GLTAIPANLPETMTEIR	2	GLTAIPANLPETMTEIR2	27178.9	24644.1	24545.2
Q4AEG0	Q4AEG0	Q4AEG0_RAT	Gp9	Glycoprotein 9	1	GLTALPVLPANTR	GLTALPVLPANTR	2	GLTALPVLPANTR2	8.70801e+06	9.35017e+06	9.27703e+06
Q4AEG0	Q4AEG0	Q4AEG0_RAT	Gp9	Glycoprotein 9	1	GLTALPVLPANTR	GLTALPVLPANTR	3	GLTALPVLPANTR3	101051	121963	122030
Q5PQL7	Q5PQL7	ITM2C_RAT	Itm2c	Integral membrane protein 2C	1	GLTAYHDISLDK	GLTAYHDISLDK	3	GLTAYHDISLDK3	10265.5	9972.2	11219.9
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	GLTDEDGLEPIIDK	GLTDEDGLEPIIDK	2	GLTDEDGLEPIIDK2	9043.64	11778	7207.72
Q5FVI3	Q5FVI3	LRC57_RAT	Lrrc57	Leucine-rich repeat-containing protein 57	1	GLTEFPSELQK	GLTEFPSELQK	2	GLTEFPSELQK2	25039.9	15887.1	22771.7
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	GLTEPQIQVVCR	GLTEPQIQVVC(UniMod:4)R	2	GLTEPQIQVVC(UniMod:4)R2	8435.9	7530.71	11661.2
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	GLTEQEVETILDK	GLTEQEVETILDK	2	GLTEQEVETILDK2	21326.6	12538.6	12688.1
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	GLTEVDPVK	GLTEVDPVK	2	GLTEVDPVK2	13760	10594.4	6374.99
D3ZT64	D3ZT64	D3ZT64_RAT	Atg2a	Autophagy related 2A	1	GLTGAVGGVIR	GLTGAVGGVIR	2	GLTGAVGGVIR2	5969.82	9592.31	7726.75
Q32Q05	Q32Q05	OTU1_RAT	Yod1	Ubiquitin thioesterase OTU1	1	GLTGQAEAR	GLTGQAEAR	2	GLTGQAEAR2	4535.6	4350.47	7755.98
G3V8G2	G3V8G2	G3V8G2_RAT	Psmd5	26S proteasome non-ATPase regulatory subunit 5	1	GLTHPDDSVK	GLTHPDDSVK	2	GLTHPDDSVK2	16419.6	8700.39	7151.42
P04905	P04905	GSTM1_RAT	Gstm1	Glutathione S-transferase Mu 1	1	GLTHPIR	GLTHPIR	2	GLTHPIR2	8844.85		
D3ZD89	D3ZD89;M0RC73	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	0	GLTLNCLGK	GLTLNC(UniMod:4)LGK	2	GLTLNC(UniMod:4)LGK2	11458.2	26799.4	18060.8
Q07205	Q07205;A0A8I6AVQ3	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	GLTLSDDLER	GLTLSDDLER	2	GLTLSDDLER2	86129.1	115744	95810
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GLTPGVIYEGQLISIQQYGHQEVTR	GLTPGVIYEGQLISIQQYGHQEVTR	3	GLTPGVIYEGQLISIQQYGHQEVTR3	4.00296e+06	4.23432e+06	4.1129e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GLTPGVIYEGQLISIQQYGHQEVTR	GLTPGVIYEGQLISIQQYGHQEVTR	4	GLTPGVIYEGQLISIQQYGHQEVTR4	354198	380936	402593
P62278	P62278;M0RCY2	RS13_RAT	Rps13	Small ribosomal subunit protein uS15	0	GLTPSQIGVILR	GLTPSQIGVILR	2	GLTPSQIGVILR2	23890.4	16754.7	10908.1
P20651	P20651	PP2BB_RAT	Ppp3cb	Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform	1	GLTPTGMLPSGVLAGGR	GLTPTGMLPSGVLAGGR	2	GLTPTGMLPSGVLAGGR2	21443.1	23438.5	30973.2
P63329	P63329	PP2BA_RAT	Ppp3ca	Protein phosphatase 3 catalytic subunit alpha	1	GLTPTGMLPSGVLSGGK	GLTPTGMLPSGVLSGGK	2	GLTPTGMLPSGVLSGGK2	56758.7	69638.4	52608.1
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	GLTQNDIEMLEQTLNDYR	GLTQNDIEMLEQTLNDYR	3	GLTQNDIEMLEQTLNDYR3	15316.6	21845.5	25560.1
Q5M872	Q5M872	DPEP2_RAT	Dpep2	Dipeptidase 2	1	GLTSFGEK	GLTSFGEK	2	GLTSFGEK2	15322.4	23713.2	29433.4
M0R5F1	M0R5F1	M0R5F1_RAT	Aspn	Asporin	1	GLTSLYALILNNNK	GLTSLYALILNNNK	2	GLTSLYALILNNNK2	74472.2	63117.8	80059.1
M0R5F1	M0R5F1	M0R5F1_RAT	Aspn	Asporin	1	GLTSLYALILNNNK	GLTSLYALILNNNK	3	GLTSLYALILNNNK3	22885.4	26008.9	27059.6
A0A8I6GES1	A0A8I6GES1	A0A8I6GES1_RAT	Zeb2	Zinc finger E-box binding homeobox 2	1	GLTSPINPYK	GLTSPINPYK	2	GLTSPINPYK2	2056.04		
Q920F5	Q920F5	DCMC_RAT	Mlycd	Malonyl-CoA decarboxylase, mitochondrial	1	GLTSSCGLMVNYR	GLTSSC(UniMod:4)GLMVNYR	2	GLTSSC(UniMod:4)GLMVNYR2	3863.06	2008.07	2574.27
P42123	P42123	LDHB_RAT	Ldhb	L-lactate dehydrogenase B chain	1	GLTSVINQK	GLTSVINQK	2	GLTSVINQK2	16394	9336.42	12012.8
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	GLTTRPGSGLTNIK	GLTTRPGSGLTNIK	3	GLTTRPGSGLTNIK3	15930.2	10613.1	15025.7
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	GLTVHLK	GLTVHLK	1	GLTVHLK1	19325.9	8741.65	7779.72
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	GLTVHLK	GLTVHLK	2	GLTVHLK2	487080	296900	263171
Q7TSU1	D4A631;Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	0	GLTVMFEIMK	GLTVMFEIMK	2	GLTVMFEIMK2	19536.8	15540	8270.19
P05369	P05369	FPPS_RAT	Fdps	Farnesyl pyrophosphate synthase	1	GLTVVQTFQELVEPR	GLTVVQTFQELVEPR	2	GLTVVQTFQELVEPR2	27097.1	30789.8	15285.3
P05369	P05369	FPPS_RAT	Fdps	Farnesyl pyrophosphate synthase	1	GLTVVQTFQELVEPR	GLTVVQTFQELVEPR	3	GLTVVQTFQELVEPR3	35620.8	37361.8	47719.3
A0A8I5Y7Q0	A0A8I5Y7Q0	A0A8I5Y7Q0_RAT	Vps13b	Vacuolar protein sorting 13 homolog B	1	GLTYLTNSLFDYR	GLTYLTNSLFDYR	2	GLTYLTNSLFDYR2		3679.4	
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	GLVAEGHR	GLVAEGHR	2	GLVAEGHR2	699477	480752	619380
D4A5Q2	D4A5Q2	D4A5Q2_RAT	Smc2	Structural maintenance of chromosomes protein	1	GLVASLINVK	GLVASLINVK	2	GLVASLINVK2	3738.71	4505.66	3700.71
O70351	O70351	HCD2_RAT	Hsd17b10	3-hydroxyacyl-CoA dehydrogenase type-2	1	GLVAVITGGASGLGLSTAK	GLVAVITGGASGLGLSTAK	2	GLVAVITGGASGLGLSTAK2	57977.9	42536.2	58933.3
O70351	O70351	HCD2_RAT	Hsd17b10	3-hydroxyacyl-CoA dehydrogenase type-2	1	GLVAVITGGASGLGLSTAK	GLVAVITGGASGLGLSTAK	3	GLVAVITGGASGLGLSTAK3	29721	26649.4	26888
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	GLVEDDFLMK	GLVEDDFLMK	2	GLVEDDFLMK2	16843.2	12308	19276
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	GLVEPVDVVDNADGTQTVNYVPSR	GLVEPVDVVDNADGTQTVNYVPSR	3	GLVEPVDVVDNADGTQTVNYVPSR3	17811.1	16990.9	18940.1
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	GLVEPVDVVDNADGTQTVNYVPSR	GLVEPVDVVDNADGTQTVNYVPSR	4	GLVEPVDVVDNADGTQTVNYVPSR4	67535.8	59844.7	80390.6
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	GLVFAISSDR	GLVFAISSDR	2	GLVFAISSDR2	53063.6	63857.3	59846.2
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	GLVFAISSDRFR	GLVFAISSDRFR	3	GLVFAISSDRFR3		7535.08	
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	GLVFDTLYGNLLK	GLVFDTLYGNLLK	2	GLVFDTLYGNLLK2	75269.5	77574.2	47876.9
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	GLVFDTLYGNLLK	GLVFDTLYGNLLK	3	GLVFDTLYGNLLK3	1931.64	1933.49	2839.08
P19804	A0A8I6A4T4;Q05982;P19804	NDKB_RAT	Nme2	Nucleoside diphosphate kinase B	0	GLVGEIIK	GLVGEIIK	2	GLVGEIIK2	395122	349266	348904
A0A8I6ANA0	A0A8I6ANA0	A0A8I6ANA0_RAT	Mfsd8	Major facilitator superfamily domain containing 8	1	GLVGFGAGNVAVVR	GLVGFGAGNVAVVR	2	GLVGFGAGNVAVVR2	4606.27		3943.78
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	GLVGIEFK	GLVGIEFK	2	GLVGIEFK2	41510.6	40474.6	34450.9
B5DF51	B5DF51	EMC5_RAT	Mmgt1	ER membrane protein complex subunit 5	1	GLVGVGLFALAHAAFSAAQHR	GLVGVGLFALAHAAFSAAQHR	4	GLVGVGLFALAHAAFSAAQHR4	10552.4	6219.4	7636.95
Q5PPN7	Q5PPN7	MITOK_RAT	Ccdc51	Mitochondrial potassium channel	1	GLVHVGQDQGSGSPTGPSSPR	GLVHVGQDQGSGSPTGPSSPR	3	GLVHVGQDQGSGSPTGPSSPR3	3870.97	5046.56	5077.53
F7ELS2	F7ELS2;Q6AYJ7;A0A8I6GM53	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	0	GLVLDHGAR	GLVLDHGAR	2	GLVLDHGAR2	131915	117505	148354
D4A929	D4A929	WDR81_RAT	Wdr81	WD repeat-containing protein 81	1	GLVLDWVHGR	GLVLDWVHGR	3	GLVLDWVHGR3	8466.68	10198.9	5145.13
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	GLVLGIYSK	GLVLGIYSK	1	GLVLGIYSK1	2727.35		2339.82
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	GLVLGIYSK	GLVLGIYSK	2	GLVLGIYSK2	46519.9	40352.8	50887.4
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	GLVLGPIHK	GLVLGPIHK	2	GLVLGPIHK2	76963.2	66806.8	63618.9
P02770	P02770	ALBU_RAT	Alb	Albumin	1	GLVLIAFSQYLQK	GLVLIAFSQYLQK	2	GLVLIAFSQYLQK2	17874.3	20836	5.74207e+06
P02770	P02770	ALBU_RAT	Alb	Albumin	1	GLVLIAFSQYLQK	GLVLIAFSQYLQK	3	GLVLIAFSQYLQK3	252438	275785	223163
P02770	P02770	ALBU_RAT	Alb	Albumin	1	GLVLIAFSQYLQKCPYEEHIK	GLVLIAFSQYLQKC(UniMod:4)PYEEHIK	3	GLVLIAFSQYLQKC(UniMod:4)PYEEHIK3	4024.69	4326.55	
P02770	P02770	ALBU_RAT	Alb	Albumin	1	GLVLIAFSQYLQKCPYEEHIK	GLVLIAFSQYLQKC(UniMod:4)PYEEHIK	4	GLVLIAFSQYLQKC(UniMod:4)PYEEHIK4	7340.15		23432.6
P35565	P35565	CALX_RAT	Canx	Calnexin	1	GLVLMSR	GLVLMSR	2	GLVLMSR2	1.51481e+06	1.51484e+06	1.75919e+06
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	GLVLPFSQGLTVSSVHFMNFDR	GLVLPFSQGLTVSSVHFMNFDR	3	GLVLPFSQGLTVSSVHFMNFDR3	33829.3	40927.1	32538.6
Q6V0K7	Q6V0K7	OIT3_RAT	Oit3	Oncoprotein-induced transcript 3 protein	1	GLVLSEDNHTCQVPVLCK	GLVLSEDNHTC(UniMod:4)QVPVLC(UniMod:4)K	3	GLVLSEDNHTC(UniMod:4)QVPVLC(UniMod:4)K3	59554.9	64306.7	55082.8
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	GLVMVKPGSIQPHQK	GLVMVKPGSIQPHQK	2	GLVMVKPGSIQPHQK2	4632.4	2187.19	1546.04
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	GLVMVKPGSIQPHQK	GLVMVKPGSIQPHQK	3	GLVMVKPGSIQPHQK3	27489.3	28678.9	32246.9
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	GLVMVKPGSIQPHQK	GLVMVKPGSIQPHQK	4	GLVMVKPGSIQPHQK4	72683.9	76623	75593.4
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	GLVNDLAR	GLVNDLAR	2	GLVNDLAR2	39195.9	35892.2	27792.5
P53676	P53676	AP3M1_RAT	Ap3m1	AP-3 complex subunit mu-1	1	GLVNLQSGAPKPEENPNLNIQFK	GLVNLQSGAPKPEENPNLNIQFK	3	GLVNLQSGAPKPEENPNLNIQFK3	39547.7	45017.6	54955.1
P70470	P70470	LYPA1_RAT	Lypla1	Acyl-protein thioesterase 1	1	GLVNPANVTFK	GLVNPANVTFK	2	GLVNPANVTFK2	10992.9	12557.3	20629.1
O89035	O89035	DIC_RAT	Slc25a10	Mitochondrial dicarboxylate carrier	1	GLVPAGVR	GLVPAGVR	2	GLVPAGVR2	46736.1	33987.4	48685.7
A7E3N2	A7E3N2	NCF2_RAT	Ncf2	Neutrophil cytosol factor 2	1	GLVPCNYLEPVELR	GLVPC(UniMod:4)NYLEPVELR	2	GLVPC(UniMod:4)NYLEPVELR2	6261.9	10762.2	8299.28
A0A8I6ABN1	A0A8I6ABN1	A0A8I6ABN1_RAT	Snx19	Sorting nexin 19	1	GLVQELR	GLVQELR	2	GLVQELR2	10472.8	10057.6	10905.1
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	GLVQHAEAVNEK	GLVQHAEAVNEK	2	GLVQHAEAVNEK2	3355.56	9451.72	3178.82
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	GLVQHAEAVNEK	GLVQHAEAVNEK	3	GLVQHAEAVNEK3	32989.3	44137.7	49734.3
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GLVRPLSTLISSSQSCQYTLEPK	GLVRPLSTLISSSQSC(UniMod:4)QYTLEPK	3	GLVRPLSTLISSSQSC(UniMod:4)QYTLEPK3	1.53059e+06	1.8101e+06	1.77764e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GLVRPLSTLISSSQSCQYTLEPK	GLVRPLSTLISSSQSC(UniMod:4)QYTLEPK	4	GLVRPLSTLISSSQSC(UniMod:4)QYTLEPK4	23783	32411	18802
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	GLVSGFVSGITGIVTKPIK	GLVSGFVSGITGIVTKPIK	2	GLVSGFVSGITGIVTKPIK2	4014.21	5050.59	5871.99
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	GLVSGFVSGITGIVTKPIK	GLVSGFVSGITGIVTKPIK	3	GLVSGFVSGITGIVTKPIK3	30179.4	33895.6	35518
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	GLVSGNVVALFMENR	GLVSGNVVALFMENR	2	GLVSGNVVALFMENR2	3137.75	4620.11	5732.43
Q66HF6	Q66HF6	Q66HF6_RAT	Tinag	Tubulointerstitial nephritis antigen	1	GLVSHACYPLFK	GLVSHAC(UniMod:4)YPLFK	3	GLVSHAC(UniMod:4)YPLFK3	10323.3	9337.83	7232.31
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	GLVSSDELAK	GLVSSDELAK	2	GLVSSDELAK2	1.06144e+06	1.10741e+06	1.25162e+06
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	GLVSSDELAKDVTGAEALLER	GLVSSDELAKDVTGAEALLER	3	GLVSSDELAKDVTGAEALLER3	19051.3	24454.8	25183.3
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	GLVSTLQNATEQMAATVSSSVR	GLVSTLQNATEQMAATVSSSVR	3	GLVSTLQNATEQMAATVSSSVR3	13495.3	9835.66	12594.8
D3Z9D0	D3Z9D0	D3Z9D0_RAT	RGD1306271	Similar to KIAA1549 protein	1	GLVTALFEVR	GLVTALFEVR	2	GLVTALFEVR2	17758.3	16647.7	3156.2
O54923	O54923	EXOC6_RAT	Exoc6	Exocyst complex component 6	1	GLVTGMSQHM	GLVTGMSQHM	2	GLVTGMSQHM2	24111.7	20484	13451.3
Q4G017	Q4G017	NISCH_RAT	Nisch	Nischarin	1	GLVTSKPTLATMSVR	GLVTSKPTLATMSVR	3	GLVTSKPTLATMSVR3		2499.95	
G3V6W5	G3V6W5	G3V6W5_RAT	Ifih1	RNA helicase	1	GLVTVEDR	GLVTVEDR	2	GLVTVEDR2	22819.5	27792.5	22322
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	GLVVDMDGFEEERK	GLVVDMDGFEEERK	3	GLVVDMDGFEEERK3	17192.7	21238.5	16605.5
P04041	P04041	GPX1_RAT	Gpx1	Glutathione peroxidase 1	1	GLVVLGFPCNQFGHQENGK	GLVVLGFPC(UniMod:4)NQFGHQENGK	3	GLVVLGFPC(UniMod:4)NQFGHQENGK3	78197.3	93593.7	79720
Q9QYV0	Q9QYV0	ADA15_RAT	Adam15	Disintegrin and metalloproteinase domain-containing protein 15	1	GLVVLSPER	GLVVLSPER	2	GLVVLSPER2	5454.49	5507.16	
Q01205	Q01205	ODO2_RAT	Dlst	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial	1	GLVVPVIR	GLVVPVIR	2	GLVVPVIR2	371996	322746	345888
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	GLVWELQQK	GLVWELQQK	2	GLVWELQQK2	11186	9377.38	13167.8
A0A8I6AC29	A0A8I6AC29	A0A8I6AC29_RAT	ENSRNOG00000066281	Ig-like domain-containing protein	1	GLVWMGTIWAGGSTNYNSAVQSR	GLVWMGTIWAGGSTNYNSAVQSR	3	GLVWMGTIWAGGSTNYNSAVQSR3	4190.93	9165.95	10544.9
Q8VHF5	Q8VHF5	CISY_RAT	Cs	Citrate synthase, mitochondrial	1	GLVYETSVLDPDEGIR	GLVYETSVLDPDEGIR	2	GLVYETSVLDPDEGIR2	451863	443130	441093
Q8VHF5	Q8VHF5	CISY_RAT	Cs	Citrate synthase, mitochondrial	1	GLVYETSVLDPDEGIR	GLVYETSVLDPDEGIR	3	GLVYETSVLDPDEGIR3	73811.8	62337.2	68082.7
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	GLVYIFNGR	GLVYIFNGR	2	GLVYIFNGR2	95566.9	80717.7	101690
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	GLWGPPIGSHLDK	GLWGPPIGSHLDK	3	GLWGPPIGSHLDK3	10941.8	9938.21	13583.7
Q5FVN0	Q5FVN0	MBOA5_RAT	Lpcat3	Lysophospholipid acyltransferase 5	1	GLWPGVEDLSLNK	GLWPGVEDLSLNK	2	GLWPGVEDLSLNK2	342127	376550	400372
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	GLWVPEGQR	GLWVPEGQR	2	GLWVPEGQR2	282092	323830	286771
Q99P63	Q99P63	MICU2_RAT	Micu2	Calcium uptake protein 2, mitochondrial	1	GLWVSQQQSVQEYWK	GLWVSQQQSVQEYWK	2	GLWVSQQQSVQEYWK2	3037.23		6336.91
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	GLYAVSSNPYAFK	GLYAVSSNPYAFK	2	GLYAVSSNPYAFK2	17593.9	12580.7	13500
P47942	P47942	DPYL2_RAT	Dpysl2	Dihydropyrimidinase-related protein 2	1	GLYDGPVCEVSVTPK	GLYDGPVC(UniMod:4)EVSVTPK	2	GLYDGPVC(UniMod:4)EVSVTPK2	16736.7	13468.4	19251.5
Q4QQV2	Q4QQV2	DOK1_RAT	Dok1	Docking protein 1	1	GLYDLPQEPK	GLYDLPQEPK	2	GLYDLPQEPK2	75776.4	73942.9	78470.1
P04642	P04642	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	1	GLYGIKEDVFLSVPCILGQNGISDVVK	GLYGIKEDVFLSVPC(UniMod:4)ILGQNGISDVVK	3	GLYGIKEDVFLSVPC(UniMod:4)ILGQNGISDVVK3	18015.4	10921	
A0A8I6AP98	A0A8I6AP98	A0A8I6AP98_RAT	Mettl27	Methyltransferase like 27	1	GLYHHLSLCTLGQEPLPYPK	GLYHHLSLC(UniMod:4)TLGQEPLPYPK	4	GLYHHLSLC(UniMod:4)TLGQEPLPYPK4	9315.31	9697.66	14787.1
B1H282	B1H282	B1H282_RAT	Colgalt1	Collagen beta(1-O)galactosyltransferase 1	1	GLYHSVEWRPAEEPSSYPDEEGPK	GLYHSVEWRPAEEPSSYPDEEGPK	4	GLYHSVEWRPAEEPSSYPDEEGPK4	5384.08		
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	GLYLSDIPIHNALR	GLYLSDIPIHNALR	2	GLYLSDIPIHNALR2	59885.3	58719.5	37550.5
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	GLYLSDIPIHNALR	GLYLSDIPIHNALR	3	GLYLSDIPIHNALR3	211725	251131	227923
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	GLYLSDIPLHDATR	GLYLSDIPLHDATR	2	GLYLSDIPLHDATR2	46515	31975.8	37178.9
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	GLYLSDIPLHDATR	GLYLSDIPLHDATR	3	GLYLSDIPLHDATR3	155919	187511	144154
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	GLYPAPLK	GLYPAPLK	2	GLYPAPLK2	276199	175443	184487
Q09073	Q09073	ADT2_RAT	Slc25a5	ADP/ATP translocase 2	1	GLYQGFNVSVQGIIIYR	GLYQGFNVSVQGIIIYR	3	GLYQGFNVSVQGIIIYR3	4844.41	3966.66	3594.95
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	GLYSCLASNEAGEAR	GLYSC(UniMod:4)LASNEAGEAR	2	GLYSC(UniMod:4)LASNEAGEAR2	10786.7	5897.88	4157.36
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	GLYTGQR	GLYTGQR	2	GLYTGQR2	55943	55585.5	72387.2
F7ETI3	F7ETI3	F7ETI3_RAT	Wdr41	WD repeat domain 41	1	GLYVYNLQLK	GLYVYNLQLK	2	GLYVYNLQLK2	9149.68	11616.1	11750.8
Q6AYT3	Q6AYT3;A0A8I5YBA4	RTCB_RAT	Rtcb	RNA-splicing ligase RtcB homolog	0	GMAAAGNYAWVNR	GMAAAGNYAWVNR	2	GMAAAGNYAWVNR2	60481.7	55053.4	66053.8
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	GMAFLHTLEPLIPR	GMAFLHTLEPLIPR	2	GMAFLHTLEPLIPR2	70391.1	83050.8	80460.1
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	GMAFLHTLEPLIPR	GMAFLHTLEPLIPR	3	GMAFLHTLEPLIPR3	518294	445143	411982
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	GMAFTLQER	GMAFTLQER	2	GMAFTLQER2	54117.8	45143.7	43095.7
F1LQ00	F1LQ00	F1LQ00_RAT	Col5a2	Collagen type V alpha 2 chain	1	GMAGGHGPDGPK	GMAGGHGPDGPK	2	GMAGGHGPDGPK2			1086.19
Q9WV63	Q9WV63;Q5XI51	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	0	GMATCFAYGQTGSGK	GMATC(UniMod:4)FAYGQTGSGK	2	GMATC(UniMod:4)FAYGQTGSGK2	164149	169727	173487
Q9WV63	Q9WV63;Q5XI51	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	0	GMATCFAYGQTGSGK	GMATC(UniMod:4)FAYGQTGSGK	3	GMATC(UniMod:4)FAYGQTGSGK3	21378.5	17259.6	23670
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	GMCASPPVIR	GMC(UniMod:4)ASPPVIR	2	GMC(UniMod:4)ASPPVIR2	41140.8	42394.8	43911.2
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	GMCSPLALGGPGQLTYTTPFQATTSSLK	GMC(UniMod:4)SPLALGGPGQLTYTTPFQATTSSLK	3	GMC(UniMod:4)SPLALGGPGQLTYTTPFQATTSSLK3	83294.4	87239.6	95623.8
Q68FQ7	Q68FQ7	RPAP3_RAT	Rpap3	RNA polymerase II-associated protein 3	1	GMDADPYNPVLPTNR	GMDADPYNPVLPTNR	2	GMDADPYNPVLPTNR2	6026.25		5509.27
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	GMDASLSPTK	GMDASLSPTK	2	GMDASLSPTK2	44668.8	63286.2	51071.5
Q704S8	Q704S8	CACP_RAT	Crat	Carnitine O-acetyltransferase	1	GMDDPKVPEQQR	GMDDPKVPEQQR	3	GMDDPKVPEQQR3	12961.3	19087.6	20980.9
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	GMDEQLTSLK	GMDEQLTSLK	2	GMDEQLTSLK2	290529	307583	295618
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	GMDHFLYGLSDEMK	GMDHFLYGLSDEMK	3	GMDHFLYGLSDEMK3	8134.86	8864.23	13214.1
F1LT49	F1LT49	F1LT49_RAT	Lrrc47	Leucine rich repeat containing 47	1	GMDLQPGNALR	GMDLQPGNALR	2	GMDLQPGNALR2	22744.4	31809.9	21626.6
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GMDMGAK	GMDMGAK	1	GMDMGAK1	10567	14471.8	8058.28
A0A8I6A0L0	A0A8I6A0L0	A0A8I6A0L0_RAT	LOC100361008	Cytochrome c oxidase subunit 5A, mitochondrial	1	GMDTLVGYDLVPEPK	GMDTLVGYDLVPEPK	2	GMDTLVGYDLVPEPK2	16218.7	17364.6	19632.4
D3ZIT4	D3ZIT4	D3ZIT4_RAT	Anapc7	Anaphase promoting complex subunit 7	1	GMDVYGYLLAR	GMDVYGYLLAR	2	GMDVYGYLLAR2	21165.6	10230.9	18346.8
D3ZCD0	D3ZCD0	D3ZCD0_RAT	Tek	receptor protein-tyrosine kinase	1	GMDYLSQK	GMDYLSQK	2	GMDYLSQK2	11493.7	13808.4	13292.3
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	GMEELIPLVNK	GMEELIPLVNK	2	GMEELIPLVNK2	200243	170399	185892
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	GMEEVGIYR	GMEEVGIYR	2	GMEEVGIYR2	9142.45	12977.3	11640
P61621	P61621	S61A1_RAT	Sec61a1	Protein transport protein Sec61 subunit alpha isoform 1	1	GMEFEGAIIALFHLLATR	GMEFEGAIIALFHLLATR	3	GMEFEGAIIALFHLLATR3		4142.99	3253.19
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	GMEFVQSFSR	GMEFVQSFSR	2	GMEFVQSFSR2	4884.42		4582.18
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	GMEGLISPTEAVGNSCGASSSCPGWLR	GMEGLISPTEAVGNSC(UniMod:4)GASSSC(UniMod:4)PGWLR	3	GMEGLISPTEAVGNSC(UniMod:4)GASSSC(UniMod:4)PGWLR3	6410.16	8995.13	6640.11
P14270	P14270;P14646;P54748	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	0	GMEISPMCDK	GMEISPMC(UniMod:4)DK	2	GMEISPMC(UniMod:4)DK2	47198.8	45241.7	62247.2
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	GMELPTGQDGHQWTMSPLHNNPK	GMELPTGQDGHQWTMSPLHNNPK	3	GMELPTGQDGHQWTMSPLHNNPK3	9929.8	6556.37	16537.6
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	GMELPTGQDGHQWTMSPLHNNPK	GMELPTGQDGHQWTMSPLHNNPK	4	GMELPTGQDGHQWTMSPLHNNPK4	16031.5	14605.3	12313.5
Q8K4Y7	Q8K4Y7	CANT1_RAT	Cant1	Soluble calcium-activated nucleotidase 1	1	GMELSDLIVFNGK	GMELSDLIVFNGK	2	GMELSDLIVFNGK2	5664.6		10128.4
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	GMEPWTLK	GMEPWTLK	2	GMEPWTLK2	31760.3	37252.7	27040.4
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	GMEYLGTK	GMEYLGTK	2	GMEYLGTK2	92279.5	79049	99772.8
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	GMFEPYLK	GMFEPYLK	2	GMFEPYLK2	178838	202913	207798
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	GMFEVLEPLHAMMER	GMFEVLEPLHAMMER	3	GMFEVLEPLHAMMER3	22670.8	23438.1	19275.2
D3Z8U5	D3Z8U5	D3Z8U5_RAT	Tll1	Metalloendopeptidase	1	GMFLDTILPSR	GMFLDTILPSR	2	GMFLDTILPSR2	2174.56	1265.68	
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	GMFLISSGPPEMYEVHAASR	GMFLISSGPPEMYEVHAASR	3	GMFLISSGPPEMYEVHAASR3	121516	100871	131375
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	GMFQSLSSLQILK	GMFQSLSSLQILK	2	GMFQSLSSLQILK2	630797	455390	481844
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	GMFQSLSSLQILK	GMFQSLSSLQILK	3	GMFQSLSSLQILK3	111543	67208.4	59837.1
P50408	P50408;A0A8I6GI88	VATF_RAT	Atp6v1f	V-type proton ATPase subunit F	0	GMFTAEDLR	GMFTAEDLR	2	GMFTAEDLR2	18088	13291.8	12562.2
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	GMFTLFSYHPVPTEPLPIPK	GMFTLFSYHPVPTEPLPIPK	3	GMFTLFSYHPVPTEPLPIPK3	3283.38	9939.69	10570.4
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	GMFTSIEPGYYQDGEFGIR	GMFTSIEPGYYQDGEFGIR	3	GMFTSIEPGYYQDGEFGIR3	11351.1	15606	13424.2
B2GV71	B2GV71	NDUF5_RAT	Ndufaf5	Arginine-hydroxylase NDUFAF5, mitochondrial	1	GMGESNCSWNR	GMGESNC(UniMod:4)SWNR	2	GMGESNC(UniMod:4)SWNR2	1797.29	1586.58	1082.38
Q05962	A0A8I5Y643;A0A8I6A075;Q05962;A0A8I6A2W7;Q09073	ADT1_RAT	Slc25a4	ADP/ATP translocase 1	0	GMGGAFVLVLYDEIK	GMGGAFVLVLYDEIK	2	GMGGAFVLVLYDEIK2	33690.8	15446.4	21542.3
Q05962	A0A8I5Y643;A0A8I6A075;Q05962;A0A8I6A2W7;Q09073	ADT1_RAT	Slc25a4	ADP/ATP translocase 1	0	GMGGAFVLVLYDEIK	GMGGAFVLVLYDEIK	3	GMGGAFVLVLYDEIK3	4726.66	6337.15	3306.8
Q05962	A0A8I5Y643;A0A8I6A075;Q05962;A0A8I6A2W7;Q09073	ADT1_RAT	Slc25a4	ADP/ATP translocase 1	0	GMGGAFVLVLYDEIKK	GMGGAFVLVLYDEIKK	2	GMGGAFVLVLYDEIKK2	21896.2	22540.9	29513.8
Q05962	A0A8I5Y643;A0A8I6A075;Q05962;A0A8I6A2W7;Q09073	ADT1_RAT	Slc25a4	ADP/ATP translocase 1	0	GMGGAFVLVLYDEIKK	GMGGAFVLVLYDEIKK	3	GMGGAFVLVLYDEIKK3	125902	220352	237712
B2GV06	B2GV06	SCOT1_RAT	Oxct1	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial	1	GMGGAMDLVSSSK	GMGGAMDLVSSSK	2	GMGGAMDLVSSSK2	102944	102736	142162
F1LN92	F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	1	GMGGLFSVGETTAK	GMGGLFSVGETTAK	2	GMGGLFSVGETTAK2	18345.8	20005.3	12143.4
Q32KK0	Q32KK0	Q32KK0_RAT	Arsl	Arylsulfatase E	1	GMGGWEGGIR	GMGGWEGGIR	2	GMGGWEGGIR2	21561.5	14829.6	21567.3
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	GMGLSLMR	GMGLSLMR	2	GMGLSLMR2	44561.1	48162.8	36690.4
P28064	P28064	PSB8_RAT	Psmb8	Proteasome subunit beta type-8	1	GMGLSMGSMICGWDK	GMGLSMGSMIC(UniMod:4)GWDK	2	GMGLSMGSMIC(UniMod:4)GWDK2	172719	142304	149294
P28064	P28064	PSB8_RAT	Psmb8	Proteasome subunit beta type-8	1	GMGLSMGSMICGWDKK	GMGLSMGSMIC(UniMod:4)GWDKK	3	GMGLSMGSMIC(UniMod:4)GWDKK3	7143	12035.8	12789.1
P28075	P28075	PSB5_RAT	Psmb5	Proteasome subunit beta type-5	1	GMGLSMGTMICGWDK	GMGLSMGTMIC(UniMod:4)GWDK	2	GMGLSMGTMIC(UniMod:4)GWDK2	209224	188666	160940
P28075	P28075	PSB5_RAT	Psmb5	Proteasome subunit beta type-5	1	GMGLSMGTMICGWDKR	GMGLSMGTMIC(UniMod:4)GWDKR	3	GMGLSMGTMIC(UniMod:4)GWDKR3	33133.3	41025.3	45057.2
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	GMGPMSEAVQFR	GMGPMSEAVQFR	2	GMGPMSEAVQFR2	93412.1	73166	75500.4
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	GMGSLDAMDK	GMGSLDAMDK	2	GMGSLDAMDK2	55007.4	56538.2	54617.3
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	GMGSMPK	GMGSMPK	1	GMGSMPK1	16771.4	11949.9	14316.2
Q9JK72	Q9JK72	CCS_RAT	Ccs	Copper chaperone for superoxide dismutase	1	GMGSSQLK	GMGSSQLK	2	GMGSSQLK2	102567	91907.2	100998
Q5PQS6	Q5PQS6	SMG9_RAT	Smg9	Nonsense-mediated mRNA decay factor SMG9	1	GMGTAAPTAMDPVVGQAK	GMGTAAPTAMDPVVGQAK	2	GMGTAAPTAMDPVVGQAK2	8320.67	2434.76	4848.79
Q5XIH7	Q5XIH7	PHB2_RAT	Phb2	Prohibitin-2	1	GMGTALK	GMGTALK	1	GMGTALK1	6203.68	4276.7	4429.31
A0A8I5ZQW6	A0A8I6G920;A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	0	GMGYLHAK	GMGYLHAK	2	GMGYLHAK2	36289.8	37197.2	32426.6
Q91ZN1	A0A8I6ANC4;Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	0	GMGYMPK	GMGYMPK	1	GMGYMPK1	52376.6	45333.8	43111.9
Q91ZN1	A0A8I6ANC4;Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	0	GMGYMPK	GMGYMPK	2	GMGYMPK2	1.25522e+06	1.11798e+06	1.20278e+06
A0A8I5Y4X4	A0A8I5Y4X4	A0A8I5Y4X4_RAT	Nub1	Negative regulator of ubiquitin-like proteins 1	1	GMGYSTQAAK	GMGYSTQAAK	2	GMGYSTQAAK2	51221.9	64716.6	56650
Q2LC84	Q2LC84	NUMB_RAT	Numb	Protein numb homolog	1	GMHICEDAVK	GMHIC(UniMod:4)EDAVK	2	GMHIC(UniMod:4)EDAVK2	1844.54		
Q2LC84	Q2LC84	NUMB_RAT	Numb	Protein numb homolog	1	GMHICEDAVK	GMHIC(UniMod:4)EDAVK	3	GMHIC(UniMod:4)EDAVK3	163244	143793	
Q2LC84	Q2LC84	NUMB_RAT	Numb	Protein numb homolog	1	GMHICEDAVKR	GMHIC(UniMod:4)EDAVKR	3	GMHIC(UniMod:4)EDAVKR3	1953.88		1625.41
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	GMIDNLLSPNLIDSALTK	GMIDNLLSPNLIDSALTK	2	GMIDNLLSPNLIDSALTK2	87676.6	85274.6	70402.5
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	GMIDNLLSPNLIDSALTK	GMIDNLLSPNLIDSALTK	3	GMIDNLLSPNLIDSALTK3	19076	24337.1	15423.7
E9PT66	E9PT66	E9PT66_RAT	Sf3b3	Splicing factor 3b, subunit 3	1	GMIFVCSATHK	GMIFVC(UniMod:4)SATHK	3	GMIFVC(UniMod:4)SATHK3	2648.33	3507.06	4675.84
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	GMINIIAAVQK	GMINIIAAVQK	2	GMINIIAAVQK2	46759	67395.5	59633.7
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	GMIQLGR	GMIQLGR	2	GMIQLGR2	3.20605e+06	2.33873e+06	2.36682e+06
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	GMIQLVILR	GMIQLVILR	2	GMIQLVILR2	4389.53	5221.61	3409.46
Q07205	Q07205;A0A8I6ADE0;A0A8I5ZMQ1	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	GMLDTHHK	GMLDTHHK	2	GMLDTHHK2	56565.9	50030.2	61558.2
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	GMLEPVQKPDVILVGAGYR	GMLEPVQKPDVILVGAGYR	3	GMLEPVQKPDVILVGAGYR3	45624	56209.1	42963.9
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	GMLEVFVAPSHHLHCSTDDQSTK	GMLEVFVAPSHHLHC(UniMod:4)STDDQSTK	4	GMLEVFVAPSHHLHC(UniMod:4)STDDQSTK4	9021.72	11034.2	6953.38
A0A0G2JWV6	A0A0G2JWV6	A0A0G2JWV6_RAT	Fam219b	Family with sequence similarity 219, member B	1	GMLGALTNRPDSSGK	GMLGALTNRPDSSGK	3	GMLGALTNRPDSSGK3	11530.6	16935.1	9891.4
P36970	P36970	GPX4_RAT	Gpx4	Phospholipid hydroperoxide glutathione peroxidase	1	GMLGNAIK	GMLGNAIK	2	GMLGNAIK2	159513	150908	162482
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	GMLHQDHITFAMLLAR	GMLHQDHITFAMLLAR	2	GMLHQDHITFAMLLAR2	1097.17	1421.8	
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	GMLHQDHITFAMLLAR	GMLHQDHITFAMLLAR	3	GMLHQDHITFAMLLAR3	28616.3	49486.1	35625.4
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	GMLHQDHITFAMLLAR	GMLHQDHITFAMLLAR	4	GMLHQDHITFAMLLAR4	46817.9	46578.8	46673.5
Q5PQR3	Q5PQR3	BTBD9_RAT	Btbd9	BTB/POZ domain-containing protein 9	1	GMLIPEENIATMK	GMLIPEENIATMK	2	GMLIPEENIATMK2	9373.28		3618.49
Q5M9G9	Q5M9G9	FAKD4_RAT	Tbrg4	FAST kinase domain-containing protein 4	1	GMLLDLAYAYGK	GMLLDLAYAYGK	2	GMLLDLAYAYGK2	9554.67	8593.64	11140.5
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	GMLLVTGR	GMLLVTGR	2	GMLLVTGR2	10967.2	12332.5	8769.81
Q9QYM2	Q9QYM2	PARG_RAT	Parg	Poly(ADP-ribose) glycohydrolase	1	GMLQVDFANR	GMLQVDFANR	2	GMLQVDFANR2			2466.26
D3ZHZ3	D3ZHZ3	D3ZHZ3_RAT	Osbpl3	Oxysterol-binding protein	1	GMLQVPKPFSGPVR	GMLQVPKPFSGPVR	3	GMLQVPKPFSGPVR3	5310.54	7340.16	7222.91
O35763	O35763	MOES_RAT	Msn	Moesin	1	GMLREDAVLEYLK	GMLREDAVLEYLK	2	GMLREDAVLEYLK2	6892.12	9739.96	7957.98
O35763	O35763	MOES_RAT	Msn	Moesin	1	GMLREDAVLEYLK	GMLREDAVLEYLK	3	GMLREDAVLEYLK3	124269	131039	137317
O70540	O70540	MADCA_RAT	Madcam1	Mucosal addressin cell adhesion molecule 1	1	GMLSDTGTR	GMLSDTGTR	2	GMLSDTGTR2	160056	145157	125299
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	GMMGQQQK	GMMGQQQK	1	GMMGQQQK1	12751.7	6245.51	6007.62
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	GMMGQQQK	GMMGQQQK	2	GMMGQQQK2	693096	761276	711516
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	GMMSPVTEVR	GMMSPVTEVR	2	GMMSPVTEVR2	14679.7	11083.8	7063.42
G3V9T7	G3V9T7	GET3_RAT	Get3	ATPase Get3	1	GMNFSVVVFDTAPTGHTLR	GMNFSVVVFDTAPTGHTLR	3	GMNFSVVVFDTAPTGHTLR3	103347	106571	91279.4
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	GMNLPAPPGVTPDDLDAFVR	GMNLPAPPGVTPDDLDAFVR	3	GMNLPAPPGVTPDDLDAFVR3	10642.4	23835.1	17654.6
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	GMNMYLTK	GMNMYLTK	2	GMNMYLTK2	21490.6	21617.8	16917.1
P11240	P11240	COX5A_RAT	Cox5a	Cytochrome c oxidase subunit 5A, mitochondrial	1	GMNTLVGYDLVPEPK	GMNTLVGYDLVPEPK	2	GMNTLVGYDLVPEPK2	646606	739064	685295
P11240	P11240	COX5A_RAT	Cox5a	Cytochrome c oxidase subunit 5A, mitochondrial	1	GMNTLVGYDLVPEPK	GMNTLVGYDLVPEPK	3	GMNTLVGYDLVPEPK3	41189.6	48366.7	40998.1
Q5XFW6	Q5XFW6	WDR6_RAT	Wdr6	WD repeat-containing protein 6	1	GMNWIAGLR	GMNWIAGLR	2	GMNWIAGLR2	20104.5	22329	24637.6
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	GMPAHFSDSAQTEACYHMLSR	GMPAHFSDSAQTEAC(UniMod:4)YHMLSR	3	GMPAHFSDSAQTEAC(UniMod:4)YHMLSR3	34802.6	21691.4	24037.1
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	GMPAHFSDSAQTEACYHMLSR	GMPAHFSDSAQTEAC(UniMod:4)YHMLSR	4	GMPAHFSDSAQTEAC(UniMod:4)YHMLSR4	72631.3	82034.7	93884.9
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	GMPAPDITWYK	GMPAPDITWYK	2	GMPAPDITWYK2	67186.6	65501.1	56874.3
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	GMPEESGETESK	GMPEESGETESK	2	GMPEESGETESK2	96157.6	123135	93129.1
A0A0G2K6R0	A0A0G2K6R0	A0A0G2K6R0_RAT	Tnrc6b	Trinucleotide repeat containing adaptor 6B	1	GMPFGMGLGNTSR	GMPFGMGLGNTSR	2	GMPFGMGLGNTSR2	13204.5	20473.7	
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	GMPLLDK	GMPLLDK	2	GMPLLDK2	38481.5	34209	46981.8
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	GMPPPPNWR	GMPPPPNWR	2	GMPPPPNWR2	59933.6	65337.6	74009.1
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	GMQDFNYLHTNCFEITLELSCNK	GMQDFNYLHTNC(UniMod:4)FEITLELSC(UniMod:4)NK	3	GMQDFNYLHTNC(UniMod:4)FEITLELSC(UniMod:4)NK3	30525.3	13056.7	12644.8
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	GMQDFNYLHTNCFEITLELSCNKFPR	GMQDFNYLHTNC(UniMod:4)FEITLELSC(UniMod:4)NKFPR	4	GMQDFNYLHTNC(UniMod:4)FEITLELSC(UniMod:4)NKFPR4	40714.5	28795.8	34814.6
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	GMQEVLQR	GMQEVLQR	2	GMQEVLQR2	42659.1	36306.8	41354.2
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	GMQIHIQQIGPGMVQQIQTVCIECK	GMQIHIQQIGPGMVQQIQTVC(UniMod:4)IEC(UniMod:4)K	3	GMQIHIQQIGPGMVQQIQTVC(UniMod:4)IEC(UniMod:4)K3	16848.2	15092.6	22580.4
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	GMQIHIQQIGPGMVQQIQTVCIECK	GMQIHIQQIGPGMVQQIQTVC(UniMod:4)IEC(UniMod:4)K	4	GMQIHIQQIGPGMVQQIQTVC(UniMod:4)IEC(UniMod:4)K4	3873.06	4302.83	4225.52
Q6TMG5	Q6TMG5	NEMO_RAT	Ikbkg	NF-kappa-B essential modulator	1	GMQLEDLR	GMQLEDLR	2	GMQLEDLR2	33932.8	33982	47094.5
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	GMQLHGVLR	GMQLHGVLR	2	GMQLHGVLR2	43642.8	27189	18038
A0A8I5ZK60	A0A8I5ZK60	A0A8I5ZK60_RAT	Ccer2	Coiled-coil glutamate-rich protein 2	1	GMQLLGGGR	GMQLLGGGR	2	GMQLLGGGR2	15091.2	17432.6	17284.1
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	GMSADPEEYDLADLSSLPEIDK	GMSADPEEYDLADLSSLPEIDK	3	GMSADPEEYDLADLSSLPEIDK3	12309.2	8580.28	6375.2
A0A0G2K130	A0A0G2K130	A0A0G2K130_RAT	Tank	TRAF family member-associated NFKB activator	1	GMSCVTSVTPR	GMSC(UniMod:4)VTSVTPR	2	GMSC(UniMod:4)VTSVTPR2	3455.84	2312.39	2699.36
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	GMSDVAQEK	GMSDVAQEK	1	GMSDVAQEK1	2011.42	3511.79	2180.77
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	GMSDVAQEK	GMSDVAQEK	2	GMSDVAQEK2	600471	748006	640639
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	GMSGQQSWK	GMSGQQSWK	2	GMSGQQSWK2	15993.9	10836.4	22224.9
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	GMSISDLAGTLSTDDLNALIAHAHR	GMSISDLAGTLSTDDLNALIAHAHR	3	GMSISDLAGTLSTDDLNALIAHAHR3	6843.31		6470.55
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	GMSISDLAGTLSTDDLNALIAHAHR	GMSISDLAGTLSTDDLNALIAHAHR	4	GMSISDLAGTLSTDDLNALIAHAHR4	48327.6	33320.7	33603.8
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	GMSLNLEPDNVGVVVFGNDK	GMSLNLEPDNVGVVVFGNDK	3	GMSLNLEPDNVGVVVFGNDK3	122246	113199	122500
A0A8I6A6H8	A0A8I6A6H8	A0A8I6A6H8_RAT	Serpinb6a	Serpin family B member 6A	1	GMTASQMVQTLSLDK	GMTASQMVQTLSLDK	2	GMTASQMVQTLSLDK2	208696	187290	184886
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	GMTENEVEDK	GMTENEVEDK	2	GMTENEVEDK2	9533.97	9904.81	9810.67
D3ZL04	D3ZL04	D3ZL04_RAT	Slc25a45	Solute carrier family 25, member 45	1	GMTLNSAR	GMTLNSAR	2	GMTLNSAR2		3515.91	5979.07
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	GMTNEEREILIGDK	GMTNEEREILIGDK	3	GMTNEEREILIGDK3	15962.2	11757.4	18551.9
Q9JMB3	Q9JMB3	Q9JMB3_RAT	Epb41l3	Erythrocyte membrane protein band 4.1-like 3	1	GMTPAEAEMHFLENAK	GMTPAEAEMHFLENAK	3	GMTPAEAEMHFLENAK3	10653.2	9085.87	
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	GMTVEGLK	GMTVEGLK	2	GMTVEGLK2	41605.7	40489.7	45444.1
Q6AYT7	Q6AYT7	ABD12_RAT	Abhd12	Lysophosphatidylserine lipase ABHD12	1	GMTYDALHVFDWIK	GMTYDALHVFDWIK	3	GMTYDALHVFDWIK3	9043.01	11645.2	5542.12
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	GMVEMIPNAETLR	GMVEMIPNAETLR	2	GMVEMIPNAETLR2	20165	16314.8	15391.7
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	GMVFGIPDGVLELVPQR	GMVFGIPDGVLELVPQR	2	GMVFGIPDGVLELVPQR2	60312.5	64335.1	55513.3
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	GMVFGIPDGVLELVPQR	GMVFGIPDGVLELVPQR	3	GMVFGIPDGVLELVPQR3	25056.8	25140.5	17869.5
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	GMVILQWGK	GMVILQWGK	2	GMVILQWGK2	43934.2	42605.4	35118.8
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	GMVITEAK	GMVITEAK	2	GMVITEAK2	23115.9	27318.9	21665.8
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	GMVMVSPR	GMVMVSPR	2	GMVMVSPR2	110359	113806	119454
D3ZS41	D3ZS41	D3ZS41_RAT	Ecm2	Extracellular matrix protein 2	1	GMVMYNK	GMVMYNK	2	GMVMYNK2	15842.5	14503.5	8525.09
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	GMVQAVR	GMVQAVR	2	GMVQAVR2	22251.7	38165.7	22111.1
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	GMVTVTDPDLIEK	GMVTVTDPDLIEK	2	GMVTVTDPDLIEK2	51047.7	57821.1	52662.3
B0BNH1	B0BNH1	B0BNH1_RAT	Gnptg	N-acetylglucosamine-1-phosphate transferase subunit gamma	1	GMWMTDGDSCHSR	GMWMTDGDSC(UniMod:4)HSR	2	GMWMTDGDSC(UniMod:4)HSR2	12461.3	3846.74	3277.2
B0BNH1	B0BNH1	B0BNH1_RAT	Gnptg	N-acetylglucosamine-1-phosphate transferase subunit gamma	1	GMWMTDGDSCHSR	GMWMTDGDSC(UniMod:4)HSR	3	GMWMTDGDSC(UniMod:4)HSR3	34081.7	28349.6	14116.6
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	GMWSEGNGSHTIR	GMWSEGNGSHTIR	3	GMWSEGNGSHTIR3	28351.2	20159.9	19345.5
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	GMYELKPECAK	GMYELKPEC(UniMod:4)AK	3	GMYELKPEC(UniMod:4)AK3	22836.2	19572.8	23459.1
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	GMYESLPVVAVK	GMYESLPVVAVK	2	GMYESLPVVAVK2	78862.3	55730.8	51544.4
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	GMYESLPVVAVK	GMYESLPVVAVK	3	GMYESLPVVAVK3	5.70271e+06	4.78428e+06	4.84391e+06
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	GMYESLPVVAVKSPLPQEPPR	GMYESLPVVAVKSPLPQEPPR	3	GMYESLPVVAVKSPLPQEPPR3	13963.6	3562.78	
B5DEH4	B5DEH4	B5DEH4_RAT	Uap1l1	UDP-N-acetylglucosamine pyrophosphorylase 1 like 1	1	GMYQVGLPSQK	GMYQVGLPSQK	2	GMYQVGLPSQK2	4867.4		7416.34
Q66H43	Q66H43	BORC6_RAT	Borcs6	BLOC-1-related complex subunit 6	1	GMYTLLAR	GMYTLLAR	2	GMYTLLAR2	11184.5	19560.5	4927.98
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	GNAACQEHLR	GNAAC(UniMod:4)QEHLR	3	GNAAC(UniMod:4)QEHLR3			128410
D4ABX9	D4ABX9	D4ABX9_RAT	Emc6	ER membrane protein complex subunit 6	1	GNAAVLDYCR	GNAAVLDYC(UniMod:4)R	2	GNAAVLDYC(UniMod:4)R2	33931.5	24652.3	22981.8
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	GNAGQSNYGFANSTMER	GNAGQSNYGFANSTMER	2	GNAGQSNYGFANSTMER2	4827.84	5683.72	10903.3
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	GNAGQSNYGFANSTMER	GNAGQSNYGFANSTMER	3	GNAGQSNYGFANSTMER3	2971.08	2327.91	2254.18
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	GNALQYETVQVVDSGPVLR	GNALQYETVQVVDSGPVLR	3	GNALQYETVQVVDSGPVLR3	16884.1	12649	16185.5
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	GNAMVEEGHFAAEDVK	GNAMVEEGHFAAEDVK	2	GNAMVEEGHFAAEDVK2	12559.8	18494.4	11771.1
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	GNAMVEEGHFAAEDVK	GNAMVEEGHFAAEDVK	3	GNAMVEEGHFAAEDVK3	399453	388475	443798
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	GNANLCR	GNANLC(UniMod:4)R	2	GNANLC(UniMod:4)R2	21655.5		25346.6
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	GNAPEGLPQLMEVVR	GNAPEGLPQLMEVVR	2	GNAPEGLPQLMEVVR2	27800.1	15218.4	17678.8
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	GNAQNTDGAIWQWR	GNAQNTDGAIWQWR	2	GNAQNTDGAIWQWR2	2805.32	1850.32	1042.02
E9PT20	E9PT20	E9PT20_RAT	Abl1	Tyrosine-protein kinase	1	GNASGMGTPATAEPAAPSNK	GNASGMGTPATAEPAAPSNK	2	GNASGMGTPATAEPAAPSNK2	1565.75	1374.95	
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	GNAVFGIFDCQTR	GNAVFGIFDC(UniMod:4)QTR	2	GNAVFGIFDC(UniMod:4)QTR2	47670	49255.5	59485.9
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	GNCECGSCVCVQPGSYGDTCEK	GNC(UniMod:4)EC(UniMod:4)GSC(UniMod:4)VC(UniMod:4)VQPGSYGDTC(UniMod:4)EK	3	GNC(UniMod:4)EC(UniMod:4)GSC(UniMod:4)VC(UniMod:4)VQPGSYGDTC(UniMod:4)EK3	2.09099e+06	2.32921e+06	2.43678e+06
A0A8I6G3Q5	A0A8I6G3Q5	A0A8I6G3Q5_RAT	Uprt	Uracil phosphoribosyltransferase homolog	1	GNCGVSIMR	GNC(UniMod:4)GVSIMR	2	GNC(UniMod:4)GVSIMR2	6863.61	5877.23	
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	GNCSYLNCLR	GNC(UniMod:4)SYLNC(UniMod:4)LR	2	GNC(UniMod:4)SYLNC(UniMod:4)LR2	29541.8	27039.7	24264.3
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	GNDAIMAR	GNDAIMAR	2	GNDAIMAR2	4610.61	6211.42	7249.51
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	GNDASLPSFR	GNDASLPSFR	2	GNDASLPSFR2	46490.1	55727.9	56290.8
A0A8I6AVP7	A0A8I6AVP7	A0A8I6AVP7_RAT	Odr4	Protein odr-4 homolog	1	GNDCDLLEGQK	GNDC(UniMod:4)DLLEGQK	2	GNDC(UniMod:4)DLLEGQK2	6254.9	4557.98	1702.49
P04916	P04916	RET4_RAT	Rbp4	Retinol-binding protein 4	1	GNDDHWIIDTDYDTFALQYSCR	GNDDHWIIDTDYDTFALQYSC(UniMod:4)R	3	GNDDHWIIDTDYDTFALQYSC(UniMod:4)R3	17717.8	17947.4	9385.38
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	GNDESPIEMIK	GNDESPIEMIK	2	GNDESPIEMIK2	18072.1	23575.9	12416.4
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	GNDIIAAAK	GNDIIAAAK	1	GNDIIAAAK1	8692.07	6163.86	5126.71
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	GNDIIAAAK	GNDIIAAAK	2	GNDIIAAAK2	1.22548e+06	1.0661e+06	1.21745e+06
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	GNDIPLALESTNTEK	GNDIPLALESTNTEK	2	GNDIPLALESTNTEK2	98346.8	91575.4	78096.9
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	GNDLLLK	GNDLLLK	2	GNDLLLK2	122250	127906	122103
Q8K1Q0	Q8K1Q0	NMT1_RAT	Nmt1	Glycylpeptide N-tetradecanoyltransferase 1	1	GNDMDSTQDQPVK	GNDMDSTQDQPVK	2	GNDMDSTQDQPVK2	6291.32	7045.13	4226.99
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	GNDMQVGTYIEK	GNDMQVGTYIEK	2	GNDMQVGTYIEK2	77542.6	57724.6	69243.3
A0A8I6G6W8	A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	GNDPNVNIVPK	GNDPNVNIVPK	2	GNDPNVNIVPK2	6728.87	9268.04	8007.2
M0R6Q0	M0R6Q0	M0R6Q0_RAT	Casd1	CAS1 domain containing 1	1	GNDSCEFLLSSGR	GNDSC(UniMod:4)EFLLSSGR	2	GNDSC(UniMod:4)EFLLSSGR2	4644.36	3511.36	10405.5
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	GNDTDSGTGSTVENSSSDLNLSISSFLSK	GNDTDSGTGSTVENSSSDLNLSISSFLSK	3	GNDTDSGTGSTVENSSSDLNLSISSFLSK3		6972.69	6408.24
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	GNECFQK	GNEC(UniMod:4)FQK	2	GNEC(UniMod:4)FQK2	28807.6	28060.1	26601
Q9QZK5	Q9QZK5	HTRA1_RAT	Htra1	Serine protease HTRA1	1	GNEDIVITVVPEEIDP	GNEDIVITVVPEEIDP	2	GNEDIVITVVPEEIDP2			3627.22
O35048	O35048	3BHS7_RAT	Hsd3b7	3 beta-hydroxysteroid dehydrogenase type 7	1	GNEDTPYEAIHR	GNEDTPYEAIHR	3	GNEDTPYEAIHR3	12054.2		12267.3
F1LM66	F1LM66	F1LM66_RAT	Eftud2	116 kDa U5 small nuclear ribonucleoprotein component	1	GNEEAQIFRPLK	GNEEAQIFRPLK	3	GNEEAQIFRPLK3	4257.12	8559.23	2722.73
Q62656	Q62656	PTPRZ_RAT	Ptprz1	Receptor-type tyrosine-protein phosphatase zeta	1	GNEEDTGLNPGR	GNEEDTGLNPGR	2	GNEEDTGLNPGR2	189319	194180	176666
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	GNEEGYFVTR	GNEEGYFVTR	2	GNEEGYFVTR2	365574	402720	455985
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	GNEEGYFVTRR	GNEEGYFVTRR	3	GNEEGYFVTRR3	5620.02	6555.92	6026.54
D3ZD73	D3ZD73;A0A8I6A3H5	D3ZD73_RAT	Ddx6	DEAD-box helicase 6	0	GNEFEDYCLK	GNEFEDYC(UniMod:4)LK	2	GNEFEDYC(UniMod:4)LK2	10138	10147.5	14485.8
P67874	P67874	CSK2B_RAT	Csnk2b	Casein kinase II subunit beta	1	GNEFFCEVDEDYIQDK	GNEFFC(UniMod:4)EVDEDYIQDK	3	GNEFFC(UniMod:4)EVDEDYIQDK3	8194.34		5477.07
D4A1B2	D4A1B2	D4A1B2_RAT	Arpin	Arpin	1	GNEIEPNFSATR	GNEIEPNFSATR	2	GNEIEPNFSATR2	158244	134391	150347
D4A1B2	D4A1B2	D4A1B2_RAT	Arpin	Arpin	1	GNEIEPNFSATRK	GNEIEPNFSATRK	2	GNEIEPNFSATRK2	3911.62		
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	GNEIVSR	GNEIVSR	2	GNEIVSR2	64854	54359.3	68978.7
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	GNEMSEVLR	GNEMSEVLR	2	GNEMSEVLR2	45049.2	41511.8	39579.1
Q6AYB5	Q6AYB5	SRP54_RAT	Srp54	Signal recognition particle subunit SRP54	1	GNEQESMAR	GNEQESMAR	2	GNEQESMAR2			967.35
A0A0G2K0I6	A0A0G2K0I6	A0A0G2K0I6_RAT	Cdh5	Cadherin 5	1	GNEYFAIDNSGLIFTK	GNEYFAIDNSGLIFTK	2	GNEYFAIDNSGLIFTK2	22340	18691.2	19218.3
A0A0G2K0I6	A0A0G2K0I6	A0A0G2K0I6_RAT	Cdh5	Cadherin 5	1	GNEYFAIDNSGLIFTK	GNEYFAIDNSGLIFTK	3	GNEYFAIDNSGLIFTK3		3439.87	
P09760	P09760	FER_RAT	Fer	Tyrosine-protein kinase Fer	1	GNFGEVYK	GNFGEVYK	2	GNFGEVYK2	10229.9	11369.4	8146.69
Q62826	Q62826	HNRPM_RAT	Hnrnpm	Heterogeneous nuclear ribonucleoprotein M	1	GNFGGSFAGSFGGAGGHAPGVAR	GNFGGSFAGSFGGAGGHAPGVAR	3	GNFGGSFAGSFGGAGGHAPGVAR3	29225.9		
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	GNFGSVEMCR	GNFGSVEMC(UniMod:4)R	2	GNFGSVEMC(UniMod:4)R2	72308.7	61130.3	70960.5
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	GNFIYVDIFEGHLR	GNFIYVDIFEGHLR	3	GNFIYVDIFEGHLR3	30852.1	38464.5	29543
P13832	P13832;P18666	MRLCA_RAT	Rlc-a	Myosin regulatory light chain RLC-A	0	GNFNYIEFTR	GNFNYIEFTR	2	GNFNYIEFTR2	1.72128e+06	1.74758e+06	1.81889e+06
Q64122	Q64122	MYL9_RAT	Myl9	Myosin regulatory light polypeptide 9	1	GNFNYVEFTR	GNFNYVEFTR	2	GNFNYVEFTR2	2.97076e+06	2.88971e+06	2.88714e+06
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	GNFPYLSAFGDLDQNQDGCISR	GNFPYLSAFGDLDQNQDGC(UniMod:4)ISR	3	GNFPYLSAFGDLDQNQDGC(UniMod:4)ISR3	38889	41436	35928
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	GNFSPVPK	GNFSPVPK	2	GNFSPVPK2	12902.9	12664.1	24082.7
D4A8N1	D4A8N1	D4A8N1_RAT	Dpm1	Dolichol-phosphate mannosyltransferase subunit 1	1	GNGGVYGWDLK	GNGGVYGWDLK	2	GNGGVYGWDLK2	7844.11	9332.73	4059.65
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	GNGIITCNPDETWTQTNAR	GNGIITC(UniMod:4)NPDETWTQTNAR	3	GNGIITC(UniMod:4)NPDETWTQTNAR3	16500.4	14784.3	29792.8
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	GNGINVIK	GNGINVIK	2	GNGINVIK2	90700.8	93346.1	100479
B8ZHC9;Q8K3P6	B8ZHC9;Q8K3P6;A0A0G2JVD2	S2541_RAT;SCMC2_RAT	Slc25a25;Slc25a41	Calcium-independent mitochondrial carrier protein SCaMC-3L	0	GNGINVLK	GNGINVLK	2	GNGINVLK2	9378.24	14909.9	13909.3
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	GNGPHDNGIIVSTR	GNGPHDNGIIVSTR	2	GNGPHDNGIIVSTR2	1245.21	547.933	
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	GNGPHDNGIIVSTR	GNGPHDNGIIVSTR	3	GNGPHDNGIIVSTR3	44426.1	44620.7	56758.2
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	GNGTSMISLIIPPK	GNGTSMISLIIPPK	2	GNGTSMISLIIPPK2	21421.3	15922.7	13465.5
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	GNGTSMISLIIPPK	GNGTSMISLIIPPK	3	GNGTSMISLIIPPK3	6253.75		
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	GNHDGAVQQYIR	GNHDGAVQQYIR	2	GNHDGAVQQYIR2		2093.76	
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	GNHDGAVQQYIR	GNHDGAVQQYIR	3	GNHDGAVQQYIR3	22350.6	15598.5	16002.3
P62138	P62138;P63088;P62142	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	0	GNHECASINR	GNHEC(UniMod:4)ASINR	2	GNHEC(UniMod:4)ASINR2			96130
P62138	P62138;P63088;P62142	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	0	GNHECASINR	GNHEC(UniMod:4)ASINR	3	GNHEC(UniMod:4)ASINR3			72670.3
Q498T9	Q498T9	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	1	GNHFEVLPPELGDCR	GNHFEVLPPELGDC(UniMod:4)R	3	GNHFEVLPPELGDC(UniMod:4)R3	11651.4	7691.61	8394.56
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	GNHFSIDEVK	GNHFSIDEVK	3	GNHFSIDEVK3	14369.7	16111.5	12940.9
B1WBS4	B1WBS4	B1WBS4_RAT	Vps26b	VPS26 retromer complex component B	1	GNHHEFVSLVK	GNHHEFVSLVK	3	GNHHEFVSLVK3	10733.3	7457.66	5342.04
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	GNHQSVLTFYS	GNHQSVLTFYS	2	GNHQSVLTFYS2	16335.6	12311.2	17663
Q924A5	Q924A5	S36A1_RAT	Slc36a1	Proton-coupled amino acid transporter 1	1	GNIGTGLLGLPLAVK	GNIGTGLLGLPLAVK	2	GNIGTGLLGLPLAVK2	3285.53	5297.57	6986.36
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	GNILLTGSR	GNILLTGSR	2	GNILLTGSR2	4522.65	4565.76	
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	GNIMLSQK	GNIMLSQK	2	GNIMLSQK2	130547	123221	143244
P26453	P26453	BASI_RAT	Bsg	Basigin	1	GNINVEGPPR	GNINVEGPPR	2	GNINVEGPPR2	531738	499827	531106
Q63621	Q63621	IL1AP_RAT	Il1rap	Interleukin-1 receptor accessory protein	1	GNINVILVQYK	GNINVILVQYK	2	GNINVILVQYK2	12973.1	14369	12316.7
F7F0H6	F7F0H6	F7F0H6_RAT	Ifgga2l1	Similar to interferon-inducible GTPase	1	GNIQMANSTISEALR	GNIQMANSTISEALR	2	GNIQMANSTISEALR2	3647.87	6104.28	4427.32
Q5FWT1	Q5FWT1	FA98A_RAT	Fam98a	Protein FAM98A	1	GNISIAHLLAAR	GNISIAHLLAAR	2	GNISIAHLLAAR2	3674.35	2634.56	3909.63
Q5FWT1	Q5FWT1	FA98A_RAT	Fam98a	Protein FAM98A	1	GNISIAHLLAAR	GNISIAHLLAAR	3	GNISIAHLLAAR3	12475.8	21200.8	12621.8
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	GNIVGWGVTEIQAHGGAQYVS	GNIVGWGVTEIQAHGGAQYVS	3	GNIVGWGVTEIQAHGGAQYVS3	49081.6	50129.3	71794.3
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	GNKDPLSSPGGPGSR	GNKDPLSSPGGPGSR	3	GNKDPLSSPGGPGSR3	34944.1	37852.9	36343.8
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	GNKEPNPMVQLSVQDVTQESK	GNKEPNPMVQLSVQDVTQESK	3	GNKEPNPMVQLSVQDVTQESK3	121004	126893	151536
P62703	D3ZX01;P62703	RS4X_RAT	Rps4x	Small ribosomal subunit protein eS4	0	GNKPWISLPR	GNKPWISLPR	3	GNKPWISLPR3	76089.9	71783	89031.9
Q6Q0N0	Q6Q0N0	CSTN1_RAT	Clstn1	Calsyntenin-1	1	GNLAGLTVR	GNLAGLTVR	2	GNLAGLTVR2	20579.3	13485.7	23795
Q05962	A0A8I6A075;Q05962;D3ZB81;A0A8I6GK78;Q09073	ADT1_RAT	Slc25a4	ADP/ATP translocase 1	0	GNLANVIR	GNLANVIR	2	GNLANVIR2	3.63924e+06	4.10501e+06	4.00865e+06
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	GNLAQAVEHHK	GNLAQAVEHHK	3	GNLAQAVEHHK3	15506.7	21282.1	10157.2
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	GNLAQAVEHHKK	GNLAQAVEHHKK	3	GNLAQAVEHHKK3	10973.6	3214.89	4609.91
Q8VI04	Q8VI04	ASGL1_RAT	Asrgl1	Isoaspartyl peptidase/L-asparaginase	1	GNLAYATSTGGIVNK	GNLAYATSTGGIVNK	2	GNLAYATSTGGIVNK2	441.616	1805.75	
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	GNLCAILK	GNLC(UniMod:4)AILK	2	GNLC(UniMod:4)AILK2	7175.87	11602.4	9724.06
P31721	P31721	C1QB_RAT	C1qb	Complement C1q subcomponent subunit B	1	GNLCVNIVR	GNLC(UniMod:4)VNIVR	2	GNLC(UniMod:4)VNIVR2	6215.48	7251.89	12618.4
A0A8I5Y4X4	A0A8I5Y4X4	A0A8I5Y4X4_RAT	Nub1	Negative regulator of ubiquitin-like proteins 1	1	GNLDDALK	GNLDDALK	2	GNLDDALK2	37634.7	44069.6	37008.5
P02761	P02761	MUP_RAT		Major urinary protein	1	GNLDVAK	GNLDVAK	1	GNLDVAK1	3056.23	4874.3	4114.97
Q78E14	M0R8N5;A0A8I6ANP0;Q78E14	Q78E14_RAT	Obp3	Alpha-2u globulin PGCL4	0	GNLDVDK	GNLDVDK	2	GNLDVDK2	78035.1	76882.8	66686.7
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	GNLECLNAILTHGIDVATR	GNLEC(UniMod:4)LNAILTHGIDVATR	3	GNLEC(UniMod:4)LNAILTHGIDVATR3	21102.4	34159.1	24680.9
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	GNLELEK	GNLELEK	2	GNLELEK2	41844.7	42210.6	39150.6
G3V6S0	Q9QWN8;G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	0	GNLEVLLFTIQSK	GNLEVLLFTIQSK	2	GNLEVLLFTIQSK2	208914	292212	269754
G3V6S0	Q9QWN8;G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	0	GNLEVLLFTIQSK	GNLEVLLFTIQSK	3	GNLEVLLFTIQSK3	64413	56870.4	56066.2
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	GNLEVLLFTIQSR	GNLEVLLFTIQSR	2	GNLEVLLFTIQSR2	31530.7	38094.3	49420.1
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	GNLEVLLFTIQSR	GNLEVLLFTIQSR	3	GNLEVLLFTIQSR3	6906.78	4998.84	9107.62
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	GNLFGEMAQLAVGGPEK	GNLFGEMAQLAVGGPEK	2	GNLFGEMAQLAVGGPEK2	8641.88	10698.7	6019.18
D3ZLM5	D3ZLM5	D3ZLM5_RAT	Nhlrc2	NHL repeat containing 2	1	GNLLFSLIGEGHKDK	GNLLFSLIGEGHKDK	3	GNLLFSLIGEGHKDK3	5699.99	2433.73	6780.74
D3ZLM5	D3ZLM5	D3ZLM5_RAT	Nhlrc2	NHL repeat containing 2	1	GNLLFSLIGEGHKDK	GNLLFSLIGEGHKDK	4	GNLLFSLIGEGHKDK4	5489.01		1813.49
D3Z9H1	D3Z9H1	D3Z9H1_RAT	Cbln3	Cerebellin 3 precursor	1	GNLLGGWK	GNLLGGWK	2	GNLLGGWK2	18250.1	30734.5	19781.9
P24062	P24062	IGF1R_RAT	Igf1r	Insulin-like growth factor 1 receptor	1	GNLLINIR	GNLLINIR	2	GNLLINIR2	7231.34	4652.78	
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	GNLLLQGTR	GNLLLQGTR	2	GNLLLQGTR2	9935	9401.12	4994.49
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GNLLQCVCTGNGR	GNLLQC(UniMod:4)VC(UniMod:4)TGNGR	2	GNLLQC(UniMod:4)VC(UniMod:4)TGNGR2	35503.3	51851.8	42213.3
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GNLLQCVCTGNGR	GNLLQC(UniMod:4)VC(UniMod:4)TGNGR	3	GNLLQC(UniMod:4)VC(UniMod:4)TGNGR3	2.45326e+06	3.09089e+06	2.89559e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GNLLQCVCTGNGRGEWK	GNLLQC(UniMod:4)VC(UniMod:4)TGNGRGEWK	2	GNLLQC(UniMod:4)VC(UniMod:4)TGNGRGEWK2	3293.14	3259.04	1462.91
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GNLLQCVCTGNGRGEWK	GNLLQC(UniMod:4)VC(UniMod:4)TGNGRGEWK	3	GNLLQC(UniMod:4)VC(UniMod:4)TGNGRGEWK3	63874.1	99600.7	86761.2
P98087	P98087;P63182	CBLN2_RAT	Cbln2	Cerebellin-2	0	GNLMGGWK	GNLMGGWK	2	GNLMGGWK2	146586	108600	128246
P58751	P58751	RELN_RAT	Reln	Reelin	1	GNLNGETIK	GNLNGETIK	2	GNLNGETIK2	131359	146447	122774
Q5FVI6	Q5FVI6	VATC1_RAT	Atp6v1c1	V-type proton ATPase subunit C 1	1	GNLQNLER	GNLQNLER	2	GNLQNLER2	15778.4	7181.32	10229.1
D3ZXY2	D3ZXY2	D3ZXY2_RAT	Pdzd8	PDZ domain containing 8	1	GNLQSVGLTLR	GNLQSVGLTLR	2	GNLQSVGLTLR2	7881.29	4257.86	7396.43
P62603	P62603	TRI26_RAT	Trim26	Tripartite motif-containing protein 26	1	GNLSLRPEDGVWALR	GNLSLRPEDGVWALR	3	GNLSLRPEDGVWALR3	5617.88	5438.07	
A0A8I5ZV77	A0A8I5ZV77	A0A8I5ZV77_RAT	Mrps36	Mitochondrial ribosomal protein S36	1	GNLSPNLLMHQGPPDTAELIK	GNLSPNLLMHQGPPDTAELIK	3	GNLSPNLLMHQGPPDTAELIK3	81968.7	70602.1	80865.5
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	GNLVTLSVWPGTYQNR	GNLVTLSVWPGTYQNR	2	GNLVTLSVWPGTYQNR2	88410.8	64760.6	73481.6
F1LVV4	F1LVV4	F1LVV4_RAT	Rcc2	Regulator of chromosome condensation 2	1	GNLYSFGCPEYGQLGHNSDGK	GNLYSFGC(UniMod:4)PEYGQLGHNSDGK	3	GNLYSFGC(UniMod:4)PEYGQLGHNSDGK3	10128.7	4225.64	1498.69
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	GNLYWTDWNR	GNLYWTDWNR	2	GNLYWTDWNR2	696260	750768	606234
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	GNMELEK	GNMELEK	2	GNMELEK2	8795.5	20267.5	16863.3
Q80Z30	Q80Z30	PPM1E_RAT	Ppm1e	Protein phosphatase 1E	1	GNMLHVAWVGDSQVMLVR	GNMLHVAWVGDSQVMLVR	3	GNMLHVAWVGDSQVMLVR3		30339.5	
F1LYX9	F1LYX9	F1LYX9_RAT	Dsg2	Desmoglein 2	1	GNNLEKPLELR	GNNLEKPLELR	2	GNNLEKPLELR2	8576.39	2998.24	6766.96
F1LYX9	F1LYX9	F1LYX9_RAT	Dsg2	Desmoglein 2	1	GNNLEKPLELR	GNNLEKPLELR	3	GNNLEKPLELR3	70346.3	73214.6	54085.9
Q561Q9	Q561Q9	Q561Q9_RAT	Ctsw	Cathepsin W	1	GNNTCGIAK	GNNTC(UniMod:4)GIAK	2	GNNTC(UniMod:4)GIAK2	12926.3		17188.5
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	GNNTTSLLSQSVAK	GNNTTSLLSQSVAK	2	GNNTTSLLSQSVAK2	66820.3	64762.7	62834.6
D3ZG07	D3ZG07	D3ZG07_RAT	Lsm6	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated	1	GNNVLYISTQK	GNNVLYISTQK	2	GNNVLYISTQK2	32295.8	31484.4	29777.3
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	GNNVYCLDR	GNNVYC(UniMod:4)LDR	2	GNNVYC(UniMod:4)LDR2	404236	475460	432564
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	GNNWPGESK	GNNWPGESK	2	GNNWPGESK2	134485	153463	146450
P61312	P61312	ADM2_RAT	Adm2	Protein ADM2	1	GNPALATVHLPQGGGSR	GNPALATVHLPQGGGSR	3	GNPALATVHLPQGGGSR3	3995.72	3392.39	6710.33
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	GNPAVSYVR	GNPAVSYVR	2	GNPAVSYVR2	2.98492e+06	3.02659e+06	3.16913e+06
P21775	P07871;P21775	THIKA_RAT	Acaa1a	3-ketoacyl-CoA thiolase A, peroxisomal	0	GNPGNISSR	GNPGNISSR	2	GNPGNISSR2	36878.5	19671.5	40737.8
F7EKI5	F7EKI5	F7EKI5_RAT	Pcdh18	Protocadherin 18	1	GNPPLHTK	GNPPLHTK	2	GNPPLHTK2			9089.63
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	GNPPLWLALASNLEDIASTLVR	GNPPLWLALASNLEDIASTLVR	3	GNPPLWLALASNLEDIASTLVR3	3503.52		
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	GNPQNQVLLHK	GNPQNQVLLHK	3	GNPQNQVLLHK3	33296.2	33853.2	33312.6
B0BNM1	B0BNM1	NNRE_RAT	Naxe	NAD(P)H-hydrate epimerase	1	GNPSGIQPDLLISLTAPK	GNPSGIQPDLLISLTAPK	2	GNPSGIQPDLLISLTAPK2	37595	47870	38264
B0BNM1	B0BNM1	NNRE_RAT	Naxe	NAD(P)H-hydrate epimerase	1	GNPSGIQPDLLISLTAPK	GNPSGIQPDLLISLTAPK	3	GNPSGIQPDLLISLTAPK3	8562.44	8161.48	10920.4
P04764	M0R5J4;P04764	ENOA_RAT	Eno1	Alpha-enolase	0	GNPTVEVDLYTAK	GNPTVEVDLYTAK	2	GNPTVEVDLYTAK2	475938	428884	426238
P04764	M0R5J4;P04764	ENOA_RAT	Eno1	Alpha-enolase	0	GNPTVEVDLYTAK	GNPTVEVDLYTAK	3	GNPTVEVDLYTAK3	7949.25		7918.01
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	GNQAFDVGRPK	GNQAFDVGRPK	2	GNQAFDVGRPK2	6690.34	7124.08	4663.43
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	GNQAFDVGRPK	GNQAFDVGRPK	3	GNQAFDVGRPK3	46051.1	45389.3	27179.6
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	GNQLQEFAAMLMPHQK	GNQLQEFAAMLMPHQK	2	GNQLQEFAAMLMPHQK2	10964.1	13345.6	11873.6
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	GNQLQEFAAMLMPHQK	GNQLQEFAAMLMPHQK	3	GNQLQEFAAMLMPHQK3	70751.3	60075.2	65665.5
Q10473	Q10473	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	1	GNQLWEYDPVK	GNQLWEYDPVK	2	GNQLWEYDPVK2	117440	133140	116719
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	GNQMMSDER	GNQMMSDER	2	GNQMMSDER2	78529.3	126179	102607
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	GNQNILIAYR	GNQNILIAYR	2	GNQNILIAYR2	53758.8	54395.6	45195.1
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	GNQQPQDLDTTAEGSHPLQHPQK	GNQQPQDLDTTAEGSHPLQHPQK	4	GNQQPQDLDTTAEGSHPLQHPQK4	4839.65	2101.89	5462.91
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GNQQSPK	GNQQSPK	1	GNQQSPK1			10251.1
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GNQQSPKATGVFTTLQPLR	GNQQSPKATGVFTTLQPLR	3	GNQQSPKATGVFTTLQPLR3	6292.9	5296.98	7043.68
A0A0G2KAF4	A0A0G2KAF4	A0A0G2KAF4_RAT	Nfxl1	Nuclear transcription factor, X-box binding-like 1	1	GNQVSVECDAACK	GNQVSVEC(UniMod:4)DAAC(UniMod:4)K	2	GNQVSVEC(UniMod:4)DAAC(UniMod:4)K2	11998.1	8331.37	9091.18
Q9ES02	Q9ES02	MEPE_RAT	Mepe	Matrix extracellular phosphoglycoprotein	1	GNQVTLTESQR	GNQVTLTESQR	2	GNQVTLTESQR2	21026.2	21070.6	18048.7
Q4V8I7	Q4V8I7	LRC8A_RAT	Lrrc8a	Volume-regulated anion channel subunit LRRC8A	1	GNRLECLPVELGECPLLK	GNRLEC(UniMod:4)LPVELGEC(UniMod:4)PLLK	3	GNRLEC(UniMod:4)LPVELGEC(UniMod:4)PLLK3	1663.71	7594.8	8361.75
Q6AYR2	Q6AYR2	NDRG3_RAT	Ndrg3	Protein NDRG3	1	GNRPVILTYHDIGLNHK	GNRPVILTYHDIGLNHK	4	GNRPVILTYHDIGLNHK4	43659.4	18949.3	11547.9
A0A8I5ZP70	A0A8I5ZP70	A0A8I5ZP70_RAT	Tom1l2	Target of myb1 like 2 membrane trafficking protein	1	GNSLAEQR	GNSLAEQR	2	GNSLAEQR2	57073	116700	107160
A0A8I6AK45	A0A8I6AK45	A0A8I6AK45_RAT	Mtch2	Mitochondrial carrier 2	1	GNSLFFR	GNSLFFR	2	GNSLFFR2	123880	114323	114361
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	GNSLQEILER	GNSLQEILER	2	GNSLQEILER2	32995.6	17416.1	21985.6
Q4FZX7	Q4FZX7	SRPRB_RAT	Srprb	Signal recognition particle receptor subunit beta	1	GNSLTLIDLPGHESLR	GNSLTLIDLPGHESLR	2	GNSLTLIDLPGHESLR2	18431.7	12491.9	11314.5
Q4FZX7	Q4FZX7	SRPRB_RAT	Srprb	Signal recognition particle receptor subunit beta	1	GNSLTLIDLPGHESLR	GNSLTLIDLPGHESLR	3	GNSLTLIDLPGHESLR3	53003.1	55807.2	63138.7
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	GNSLTSK	GNSLTSK	1	GNSLTSK1			6834.36
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	GNSMEEILEGLK	GNSMEEILEGLK	2	GNSMEEILEGLK2	395872	389382	374420
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	GNSMEEILEGLK	GNSMEEILEGLK	3	GNSMEEILEGLK3	11503.9	10200.8	8675.91
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	GNSPLLQK	GNSPLLQK	2	GNSPLLQK2	23101.8	18259	19677.8
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	GNSSESIEAIR	GNSSESIEAIR	2	GNSSESIEAIR2	7775.47	6719.61	8545.22
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	GNSSESIEAIREYEEEFFQNSK	GNSSESIEAIREYEEEFFQNSK	3	GNSSESIEAIREYEEEFFQNSK3	36675.9	50250.7	42614.8
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	GNTAAYLLYAFTR	GNTAAYLLYAFTR	2	GNTAAYLLYAFTR2	18164.4	26931.9	24795.6
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	GNTAAYLLYAFTR	GNTAAYLLYAFTR	3	GNTAAYLLYAFTR3	18397.7	22140.9	22257.5
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	GNTALHIAALAGQDEVVR	GNTALHIAALAGQDEVVR	3	GNTALHIAALAGQDEVVR3	2535.05		
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	GNTEGLQK	GNTEGLQK	1	GNTEGLQK1	59150.1		59739.2
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	GNTEGLQK	GNTEGLQK	2	GNTEGLQK2	638080		1.17388e+06
P14630	P14630	APOM_RAT	Apom	Apolipoprotein M	1	GNTELRTEGRPDMK	GNTELRTEGRPDMK	3	GNTELRTEGRPDMK3	14272.7	14300.8	
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	GNTFSCSCPAPFSGSR	GNTFSC(UniMod:4)SC(UniMod:4)PAPFSGSR	2	GNTFSC(UniMod:4)SC(UniMod:4)PAPFSGSR2	1.3446e+06	1.50341e+06	1.55646e+06
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	GNTFSCSCPAPFSGSR	GNTFSC(UniMod:4)SC(UniMod:4)PAPFSGSR	3	GNTFSC(UniMod:4)SC(UniMod:4)PAPFSGSR3	367371	376122	391565
Q63556	Q63556	SPA3M_RAT	Serpina3m	Serine protease inhibitor A3M (Fragment)	1	GNTLEEILEVLR	GNTLEEILEVLR	2	GNTLEEILEVLR2	35166	22035	29568.2
Q63556	Q63556	SPA3M_RAT	Serpina3m	Serine protease inhibitor A3M (Fragment)	1	GNTLEEILEVLR	GNTLEEILEVLR	3	GNTLEEILEVLR3	7556.91	5135.29	4877.13
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	GNTLKEDWIAYISR	GNTLKEDWIAYISR	3	GNTLKEDWIAYISR3	29520.7	41463.2	30691.1
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	GNTLKEEWIAYICR	GNTLKEEWIAYIC(UniMod:4)R	3	GNTLKEEWIAYIC(UniMod:4)R3	10032.2	17356.6	
Q32KJ6	Q32KJ6	GALNS_RAT	Galns	N-acetylgalactosamine-6-sulfatase	1	GNTLMAVTLGQYK	GNTLMAVTLGQYK	2	GNTLMAVTLGQYK2	11036.5	8411.74	7462.9
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	GNTLTQCLGFQEFQK	GNTLTQC(UniMod:4)LGFQEFQK	2	GNTLTQC(UniMod:4)LGFQEFQK2	38964.8	50008.5	44705
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	GNTLTQCLGFQEFQK	GNTLTQC(UniMod:4)LGFQEFQK	3	GNTLTQC(UniMod:4)LGFQEFQK3	18156.4	17257	10715.9
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	GNTPESNRDEFFVIDR	GNTPESNRDEFFVIDR	3	GNTPESNRDEFFVIDR3	51515.2	54865.4	57800.6
D3ZXK7	D3ZXK7	RN123_RAT	Rnf123	E3 ubiquitin-protein ligase RNF123	1	GNTPVLCPPEYMVCFLHR	GNTPVLC(UniMod:4)PPEYMVC(UniMod:4)FLHR	3	GNTPVLC(UniMod:4)PPEYMVC(UniMod:4)FLHR3	9406.23	6480.74	6646.17
A0A8I6AVP7	A0A8I6AVP7	A0A8I6AVP7_RAT	Odr4	Protein odr-4 homolog	1	GNTQAAAHSFDVR	GNTQAAAHSFDVR	3	GNTQAAAHSFDVR3	8181.25	9719.86	9293.95
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	GNTSGSHIVNHLVR	GNTSGSHIVNHLVR	3	GNTSGSHIVNHLVR3	39139.7	21653.4	18711.2
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	GNTSSSPPGPR	GNTSSSPPGPR	2	GNTSSSPPGPR2			3347.29
Q91XT9	Q91XT9	ASAH2_RAT	Asah2	Neutral ceramidase	1	GNVANVQINR	GNVANVQINR	2	GNVANVQINR2	8861.99	3174.7	1018.63
A0A8I5ZKH1	A0A8I5ZKH1	A0A8I5ZKH1_RAT	Ythdc2	RNA helicase	1	GNVFAVEAENR	GNVFAVEAENR	2	GNVFAVEAENR2	3704.12	5940.84	5789
P19945	P19945	RLA0_RAT	Rplp0	Large ribosomal subunit protein uL10	1	GNVGFVFTK	GNVGFVFTK	2	GNVGFVFTK2	157309	136372	160516
Q7TS56	Q7TS56	CBR4_RAT	Cbr4	3-oxoacyl-[acyl-carrier-protein] reductase	1	GNVGQAAYSATK	GNVGQAAYSATK	2	GNVGQAAYSATK2	15997.1	12050.1	13925.1
P70583	D4A6V3;P70583	DUT_RAT	Dut	Deoxyuridine 5'-triphosphate nucleotidohydrolase	0	GNVGVVLFNFGK	GNVGVVLFNFGK	2	GNVGVVLFNFGK2	5525.18	5110.02	4640.43
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	GNVILIGTTR	GNVILIGTTR	2	GNVILIGTTR2	105231	92780.5	123253
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	GNVIMVR	GNVIMVR	2	GNVIMVR2		8719.66	8136.31
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	GNVLAWPDFVSGITGK	GNVLAWPDFVSGITGK	2	GNVLAWPDFVSGITGK2	146652	191414	182703
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	GNVLAWPDFVSGITGK	GNVLAWPDFVSGITGK	3	GNVLAWPDFVSGITGK3	1359.3		4314.95
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	GNVLSLSLLR	GNVLSLSLLR	2	GNVLSLSLLR2	10325.3	4431.7	10849.7
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	GNVPLQPSAR	GNVPLQPSAR	2	GNVPLQPSAR2	271999	234313	290575
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	GNVQVVIPFLTESYSSSQDPPEK	GNVQVVIPFLTESYSSSQDPPEK	3	GNVQVVIPFLTESYSSSQDPPEK3	53933.2	45826.6	56138.8
Q5XIC1	Q5XIC1	GMPPA_RAT	Gmppa	Mannose-1-phosphate guanyltransferase alpha	1	GNVYIHPTAK	GNVYIHPTAK	2	GNVYIHPTAK2	4842.32	1266.6	
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	GNWAHLDQLAALR	GNWAHLDQLAALR	2	GNWAHLDQLAALR2	30207.7	22878.2	19818
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	GNWAHLDQLAALR	GNWAHLDQLAALR	3	GNWAHLDQLAALR3	96279.2	98665.8	86440.3
A0A8I6ACU2	A0A8I6ACU2	A0A8I6ACU2_RAT	Ubap2l	Ubiquitin associated protein 2-like	1	GNWEQPQNQNQTQHK	GNWEQPQNQNQTQHK	3	GNWEQPQNQNQTQHK3	15170.1	23775.7	14379.7
Q8K3R0	G3V7J5;A0A8L2QWT9;Q8K3R0;M0R9W7;O70631	EST2A_RAT	Ces2a	Pyrethroid hydrolase Ces2a	0	GNWGYLDQVAALR	GNWGYLDQVAALR	2	GNWGYLDQVAALR2	19141.6	17877.4	7177.56
A0A8I6A5W7	A0A8I6A5W7	A0A8I6A5W7_RAT	Ccdc88a	Coiled coil domain containing 88A	1	GNWITLK	GNWITLK	2	GNWITLK2	3634.61	3596.47	3506.65
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	GNYDEGFGHK	GNYDEGFGHK	2	GNYDEGFGHK2	15020.7	17809.7	19622.5
Q4KM31	Q4KM31	LIMD2_RAT	Limd2	LIM domain-containing protein 2	1	GNYDEGFGR	GNYDEGFGR	2	GNYDEGFGR2	7085.16	3885.74	3525.71
Q3KR57	Q3KR57	Q3KR57_RAT	Grap2	GRB2-related adaptor protein 2	1	GNYFLWTEK	GNYFLWTEK	2	GNYFLWTEK2	10013	4763.55	10761.8
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	GPAAEEALNVFYYCTYEGAVDLDHVADER	GPAAEEALNVFYYC(UniMod:4)TYEGAVDLDHVADER	4	GPAAEEALNVFYYC(UniMod:4)TYEGAVDLDHVADER4	8083.73	3117.48	768.848
D3ZSC2	D3ZSC2	D3ZSC2_RAT	Pdcd2l	Programmed cell death 2-like	1	GPAAWTASK	GPAAWTASK	2	GPAAWTASK2	42145.1	60348.3	57658.9
F1LQ27	F1LQ27	F1LQ27_RAT	Fam98c	Family with sequence similarity 98, member C	1	GPACADFR	GPAC(UniMod:4)ADFR	2	GPAC(UniMod:4)ADFR2	11441.9	8197.32	15337.7
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	GPAEDMSSK	GPAEDMSSK	1	GPAEDMSSK1		533.283	
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	GPAEDMSSK	GPAEDMSSK	2	GPAEDMSSK2	38259.7	20916.1	27198.7
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	GPAEESSSWR	GPAEESSSWR	2	GPAEESSSWR2	18860.1	23751.9	21507.6
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	GPAEGEEAVPAER	GPAEGEEAVPAER	2	GPAEGEEAVPAER2	6127.19	6413.67	5501.72
D4A7V9	D4A7V9	E2AK4_RAT	Eif2ak4	eIF-2-alpha kinase GCN2	1	GPAEPQESYSQR	GPAEPQESYSQR	2	GPAEPQESYSQR2	3961.58	6443.58	8883.92
F1MAF8	F1MAF8	F1MAF8_RAT	Atg2b	Autophagy related 2B	1	GPAFQSDLVHPASLQK	GPAFQSDLVHPASLQK	3	GPAFQSDLVHPASLQK3	7178.97	3257.66	
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	GPAFVNPLVPENK	GPAFVNPLVPENK	2	GPAFVNPLVPENK2	20118.6	19588.7	23389.6
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	GPAFVNPLVPENKEEEELITQGELNK	GPAFVNPLVPENKEEEELITQGELNK	3	GPAFVNPLVPENKEEEELITQGELNK3	19082.6	13659.1	18086.3
Q68FW7	Q68FW7	SYTM_RAT	Tars2	Threonine--tRNA ligase, mitochondrial	1	GPAGAPECPVLIHR	GPAGAPEC(UniMod:4)PVLIHR	3	GPAGAPEC(UniMod:4)PVLIHR3	6478.1	9136.04	5143.93
P02454	P02454	CO1A1_RAT	Col1a1	Collagen alpha-1(I) chain	1	GPAGPQGPR	GPAGPQGPR	2	GPAGPQGPR2	26159.6		25613.1
P02466	P02466	CO1A2_RAT	Col1a2	Collagen alpha-2(I) chain	1	GPAGPSGPIGK	GPAGPSGPIGK	2	GPAGPSGPIGK2	22663.6	22163.5	15816.4
Q9WU61	Q9WU61	CLCC1_RAT	Clcc1	Chloride channel CLIC-like protein 1	1	GPAGSIEQGPYDK	GPAGSIEQGPYDK	2	GPAGSIEQGPYDK2	2635.22	5881.47	
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	GPAIGIDLGTTYSCVGVFQHGK	GPAIGIDLGTTYSC(UniMod:4)VGVFQHGK	3	GPAIGIDLGTTYSC(UniMod:4)VGVFQHGK3	45437.4	33397.4	33673
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	GPALCGSQR	GPALC(UniMod:4)GSQR	2	GPALC(UniMod:4)GSQR2	226375	360793	326986
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	GPAQPGSADAEKPFYVNVEFHHER	GPAQPGSADAEKPFYVNVEFHHER	4	GPAQPGSADAEKPFYVNVEFHHER4	4427.48		
Q9Z254	Q9Z254	GIPC1_RAT	Gipc1	PDZ domain-containing protein GIPC1	1	GPATVEDLPSAFEEK	GPATVEDLPSAFEEK	2	GPATVEDLPSAFEEK2	16150.5	11843.8	14474.2
P63018	P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	GPAVGIDLGTTYSCVGVFQHGK	GPAVGIDLGTTYSC(UniMod:4)VGVFQHGK	3	GPAVGIDLGTTYSC(UniMod:4)VGVFQHGK3	1.08753e+06	977378	925998
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	GPAVQATK	GPAVQATK	2	GPAVQATK2			22244.7
F7EUD8	F7EUD8	F7EUD8_RAT	Trpc6	Transient receptor ion channel domain-containing protein	1	GPAYMFNDHSTSLSIEEER	GPAYMFNDHSTSLSIEEER	3	GPAYMFNDHSTSLSIEEER3	48467	58000.4	54818.7
P50878	A0A8I6ASF5;P50878	RL4_RAT	Rpl4	Large ribosomal subunit protein uL4	0	GPCIIYNEDNGIIK	GPC(UniMod:4)IIYNEDNGIIK	2	GPC(UniMod:4)IIYNEDNGIIK2	10464.7	10187.9	12486
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	GPCLPDLDIGEVAAK	GPC(UniMod:4)LPDLDIGEVAAK	2	GPC(UniMod:4)LPDLDIGEVAAK2	35470.1	37659.4	49102.9
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	GPCLPDLDIGEVAAK	GPC(UniMod:4)LPDLDIGEVAAK	3	GPC(UniMod:4)LPDLDIGEVAAK3	1888.54	2515.8	
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	GPCSPNPCFHDAK	GPC(UniMod:4)SPNPC(UniMod:4)FHDAK	3	GPC(UniMod:4)SPNPC(UniMod:4)FHDAK3	13695.5	16892.9	17976.1
D3ZG57	D3ZG57	D3ZG57_RAT	Tor4a	Torsin family 4, member A	1	GPCVIAPVR	GPC(UniMod:4)VIAPVR	2	GPC(UniMod:4)VIAPVR2	54552.9	57450.6	65898
B5DFC3	B5DFC3	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	1	GPCVSENEIGTGGTCQWK	GPC(UniMod:4)VSENEIGTGGTC(UniMod:4)QWK	3	GPC(UniMod:4)VSENEIGTGGTC(UniMod:4)QWK3	6607.82		
D3ZCT7	D3ZCT7	D3ZCT7_RAT	Sec23b	Protein transport protein SEC23	1	GPCVSENELGVGGTSQWK	GPC(UniMod:4)VSENELGVGGTSQWK	2	GPC(UniMod:4)VSENELGVGGTSQWK2	7431.72	4792.27	4512.86
D3ZCT7	D3ZCT7	D3ZCT7_RAT	Sec23b	Protein transport protein SEC23	1	GPCVSENELGVGGTSQWK	GPC(UniMod:4)VSENELGVGGTSQWK	3	GPC(UniMod:4)VSENELGVGGTSQWK3	8711.73	7928.02	
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	GPDAASK	GPDAASK	1	GPDAASK1	1093.2	1730.19	
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	GPDACGIITAPEGPLAPCHSLVPPTK	GPDAC(UniMod:4)GIITAPEGPLAPC(UniMod:4)HSLVPPTK	3	GPDAC(UniMod:4)GIITAPEGPLAPC(UniMod:4)HSLVPPTK3	167883	124283	141459
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	GPDCAIQTCPGDCR	GPDC(UniMod:4)AIQTC(UniMod:4)PGDC(UniMod:4)R	2	GPDC(UniMod:4)AIQTC(UniMod:4)PGDC(UniMod:4)R2	8666.24	10681.8	7002.78
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	GPDDDPATLFEMAK	GPDDDPATLFEMAK	2	GPDDDPATLFEMAK2	4393.01	3669.62	6869.08
Q5PPI8	Q5PPI8	Q5PPI8_RAT	Rmc1	Regulator of MON1-CCZ1	1	GPDDRNPISFR	GPDDRNPISFR	3	GPDDRNPISFR3	15978.5	20178.5	10252.2
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	GPDEALLTCK	GPDEALLTC(UniMod:4)K	2	GPDEALLTC(UniMod:4)K2	5793.44	7462.63	5585.59
Q9R1N3	Q9R1N3	S4A7_RAT	Slc4a7	Sodium bicarbonate cotransporter 3	1	GPDEEAVVDLGK	GPDEEAVVDLGK	2	GPDEEAVVDLGK2	3588.28	2874.54	6356.77
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	GPDEEGVHEINFLFYYESVK	GPDEEGVHEINFLFYYESVK	3	GPDEEGVHEINFLFYYESVK3	8273.66		
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	GPDEEHLGILGPVIWAEVGDIIR	GPDEEHLGILGPVIWAEVGDIIR	3	GPDEEHLGILGPVIWAEVGDIIR3	135165	49943.5	25649.9
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	GPDFTPAFADFGR	GPDFTPAFADFGR	2	GPDFTPAFADFGR2	22440.8	17863.6	23910.5
Q5XIB4	Q5XIB4	UFSP2_RAT	Ufsp2	Ufm1-specific protease 2	1	GPDFWNK	GPDFWNK	2	GPDFWNK2	9533.05	9208.97	12090.1
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	GPDGLGFSIVGGYGSPHGDLPIYVK	GPDGLGFSIVGGYGSPHGDLPIYVK	3	GPDGLGFSIVGGYGSPHGDLPIYVK3		2958.85	2695.48
P62775	P62775	MTPN_RAT	Mtpn	Myotrophin	1	GPDGLTALEATDNQAIK	GPDGLTALEATDNQAIK	2	GPDGLTALEATDNQAIK2	74491.8	68846.3	77130.1
P62775	P62775	MTPN_RAT	Mtpn	Myotrophin	1	GPDGLTALEATDNQAIK	GPDGLTALEATDNQAIK	3	GPDGLTALEATDNQAIK3	16967.3	18969.4	13425.8
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	GPDGSAHNLR	GPDGSAHNLR	2	GPDGSAHNLR2			5571.8
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	GPDGVCIPCQPGQPGQLVGR	GPDGVC(UniMod:4)IPC(UniMod:4)QPGQPGQLVGR	3	GPDGVC(UniMod:4)IPC(UniMod:4)QPGQPGQLVGR3	28140.2	34607.4	25438
P30121	P30121	TIMP2_RAT	Timp2	Metalloproteinase inhibitor 2	1	GPDKDIEFIYTAPSSAVCGVSLDVGGK	GPDKDIEFIYTAPSSAVC(UniMod:4)GVSLDVGGK	3	GPDKDIEFIYTAPSSAVC(UniMod:4)GVSLDVGGK3	3872.24	920.508	3170.61
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	GPDLAAAPYSTQK	GPDLAAAPYSTQK	2	GPDLAAAPYSTQK2	14108.2	9846.32	16930.5
G3V6K6	G3V6K6	G3V6K6_RAT	Egfr	Receptor protein-tyrosine kinase	1	GPDNCIK	GPDNC(UniMod:4)IK	1	GPDNC(UniMod:4)IK1	10750.1		3185.97
P18395	P18395	CSDE1_RAT	Csde1	Cold shock domain-containing protein E1	1	GPDNSMGFGAER	GPDNSMGFGAER	2	GPDNSMGFGAER2	7664.94	8871	8185.16
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	GPDQACGVSVVNGK	GPDQAC(UniMod:4)GVSVVNGK	2	GPDQAC(UniMod:4)GVSVVNGK2	10922.3	10054.9	9926.21
O70593	O70593	SGTA_RAT	Sgta	Small glutamine-rich tetratricopeptide repeat-containing protein alpha	1	GPDRTPPSEEDSAEAER	GPDRTPPSEEDSAEAER	3	GPDRTPPSEEDSAEAER3	18189.8	24025.7	17487.2
D3ZZ26	D3ZZ26	D3ZZ26_RAT	Ppp1r3d	Protein phosphatase 1, regulatory subunit 3D	1	GPDSALLPSTPGPR	GPDSALLPSTPGPR	2	GPDSALLPSTPGPR2	999420	924022	961903
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	GPDSVFLIK	GPDSVFLIK	1	GPDSVFLIK1	51410.1	41747.6	32361.5
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	GPDSVFLIK	GPDSVFLIK	2	GPDSVFLIK2	1.12019e+06	1.05132e+06	1.04153e+06
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	GPDSVFLIKEDK	GPDSVFLIKEDK	2	GPDSVFLIKEDK2	59457	61492.3	70203.4
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	GPDSVFLIKEDK	GPDSVFLIKEDK	3	GPDSVFLIKEDK3	883492	1.01436e+06	993976
O70248	O70248	APBA3_RAT	Apba3	Amyloid-beta A4 precursor protein-binding family A member 3	1	GPDTLSEMELDTSSVR	GPDTLSEMELDTSSVR	2	GPDTLSEMELDTSSVR2	3950.87	3847.16	
P14562	P14562	LAMP1_RAT	Lamp1	Lysosome-associated membrane glycoprotein 1	1	GPDTVDSTTDIK	GPDTVDSTTDIK	2	GPDTVDSTTDIK2	253460	231994	245329
D3ZW49	D3ZW49	D3ZW49_RAT	Tmem9b	TMEM9 domain family, member B	1	GPDVEAYCLR	GPDVEAYC(UniMod:4)LR	2	GPDVEAYC(UniMod:4)LR2	14707.4	16123.6	19816.4
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	GPDWILGEMK	GPDWILGEMK	2	GPDWILGEMK2	86732.9	93860.8	84309.4
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	GPEADSEWR	GPEADSEWR	2	GPEADSEWR2	58074.7	61248.6	34520.2
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	GPEDTAQLAHAVLAK	GPEDTAQLAHAVLAK	2	GPEDTAQLAHAVLAK2	3149.68	3922.97	6896.99
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	GPEDTAQLAHAVLAK	GPEDTAQLAHAVLAK	3	GPEDTAQLAHAVLAK3	195182	150818	182199
Q5XIC2	Q5XIC2	ECSIT_RAT	Ecsit	Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial	1	GPEEDDEAIQAQQR	GPEEDDEAIQAQQR	2	GPEEDDEAIQAQQR2	1105.93	2906.96	1713.07
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	GPEEINEELMK	GPEEINEELMK	2	GPEEINEELMK2	49552.4	55780.6	57478.6
F7ERH6	F7ERH6	F7ERH6_RAT	Atf6b	Activating transcription factor 6 beta	1	GPEEQQPSPAGKPSFR	GPEEQQPSPAGKPSFR	3	GPEEQQPSPAGKPSFR3	1699.49	1848.37	5472.32
D4AB06	D4AB06	D4AB06_RAT	Haus5	HAUS augmin-like complex, subunit 5	1	GPEEVLALIR	GPEEVLALIR	2	GPEEVLALIR2	3141.38	2306.01	3757.93
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	GPEFWESK	GPEFWESK	2	GPEFWESK2	19921.5	24870.4	18915.8
D3ZVW3	D3ZVW3	D3ZVW3_RAT	Zc3h4	Zinc finger CCCH-type containing 4	1	GPEGNGK	GPEGNGK	1	GPEGNGK1	7544.87		2801.27
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	GPEISVPADLDK	GPEISVPADLDK	2	GPEISVPADLDK2	55848.1	49831.6	51352.1
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	GPELLTMWFGESEANVR	GPELLTMWFGESEANVR	2	GPELLTMWFGESEANVR2	31864.8	26685.3	23762.9
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	GPELLTMWFGESEANVR	GPELLTMWFGESEANVR	3	GPELLTMWFGESEANVR3	16186.6	16774.7	24537.3
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	GPENTLR	GPENTLR	2	GPENTLR2	34891.1	24538.1	18569.4
M0RAK0	M0RAK0	M0RAK0_RAT	Proser2	Proline and serine rich 2	1	GPEVLPLPSSLPISAPSAPQK	GPEVLPLPSSLPISAPSAPQK	3	GPEVLPLPSSLPISAPSAPQK3	47631	55818.9	57050.2
O70248	O70248	APBA3_RAT	Apba3	Amyloid-beta A4 precursor protein-binding family A member 3	1	GPEVPSEDHPSNTQWALGPR	GPEVPSEDHPSNTQWALGPR	3	GPEVPSEDHPSNTQWALGPR3	8878.09	8921.67	
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	GPFATCHK	GPFATC(UniMod:4)HK	1	GPFATC(UniMod:4)HK1		24058.5	
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	GPFDSFVILYK	GPFDSFVILYK	2	GPFDSFVILYK2	12493.9	11723.2	8701.78
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	GPFGRDELLR	GPFGRDELLR	3	GPFGRDELLR3	182524	225323	179223
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	GPFLLGIK	GPFLLGIK	2	GPFLLGIK2	20708.2	21675	15801.9
Q5M9G9	Q5M9G9	FAKD4_RAT	Tbrg4	FAST kinase domain-containing protein 4	1	GPFLPASAVAPSPSPSNK	GPFLPASAVAPSPSPSNK	2	GPFLPASAVAPSPSPSNK2	7884.81	5823.8	4370.2
Q5M9G9	Q5M9G9	FAKD4_RAT	Tbrg4	FAST kinase domain-containing protein 4	1	GPFLPASAVAPSPSPSNKK	GPFLPASAVAPSPSPSNKK	3	GPFLPASAVAPSPSPSNKK3	17964.6	27140	15146.9
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	GPFLVALGK	GPFLVALGK	1	GPFLVALGK1	6377.11	4903.6	1508.61
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	GPFLVALGK	GPFLVALGK	2	GPFLVALGK2	182858	156887	180733
Q9Z1Y3	Q9Z1Y3	CADH2_RAT	Cdh2	Cadherin-2	1	GPFPQELVR	GPFPQELVR	2	GPFPQELVR2	44568.6	37350.3	29528.3
F1LTX4	F1LTX4	F1LTX4_RAT	Lrrn4	Leucine rich repeat neuronal 4	1	GPFSGPLPLSHLSNVCR	GPFSGPLPLSHLSNVC(UniMod:4)R	3	GPFSGPLPLSHLSNVC(UniMod:4)R3	17885.1	27056.7	27607.6
Q9Z270	Q9Z269;Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	0	GPFTDVVTTNLK	GPFTDVVTTNLK	2	GPFTDVVTTNLK2	190979	168721	181819
Q9Z270	Q9Z269;Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	0	GPFTDVVTTNLK	GPFTDVVTTNLK	3	GPFTDVVTTNLK3	104284	113213	100369
A0A096MK24	A0A096MK24	A0A096MK24_RAT	Morc4	Microrchidia 4	1	GPFVAVVGVAK	GPFVAVVGVAK	2	GPFVAVVGVAK2	5373.85	3679.17	5018.2
P86411	P86411	RGPA2_RAT	Ralgapa2	Ral GTPase-activating protein subunit alpha-2	1	GPFYFCR	GPFYFC(UniMod:4)R	2	GPFYFC(UniMod:4)R2	7934.09	6241.06	2777.33
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	GPGAGPGVGGPSR	GPGAGPGVGGPSR	2	GPGAGPGVGGPSR2	69002	49507.5	62349.8
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	GPGAPCQDVDECAR	GPGAPC(UniMod:4)QDVDEC(UniMod:4)AR	2	GPGAPC(UniMod:4)QDVDEC(UniMod:4)AR2	70172.5	48251.4	70352.8
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	GPGAPVSPSVSHPQGPDSTR	GPGAPVSPSVSHPQGPDSTR	3	GPGAPVSPSVSHPQGPDSTR3	98107.4	87911.1	83209.2
A0A8I6AVZ7	A0A8I6AVZ7	A0A8I6AVZ7_RAT	Mtcl1	Microtubule crosslinking factor 1	1	GPGASAPLQEELK	GPGASAPLQEELK	2	GPGASAPLQEELK2	4129.15	2219.63	
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	GPGATLEHQQEISK	GPGATLEHQQEISK	2	GPGATLEHQQEISK2		2988.31	
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	GPGATLEHQQEISK	GPGATLEHQQEISK	3	GPGATLEHQQEISK3	166677	150763	167855
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	GPGFLSIEPLDLR	GPGFLSIEPLDLR	2	GPGFLSIEPLDLR2	50369.2	59334.2	39830.5
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	GPGFLSIEPLDLR	GPGFLSIEPLDLR	3	GPGFLSIEPLDLR3	90840.3	75113.4	69708.2
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	GPGFLSIEPLDLRSPR	GPGFLSIEPLDLRSPR	3	GPGFLSIEPLDLRSPR3	68263.8	73131	79814.4
Q99MC0	Q99MC0	PP14A_RAT	Ppp1r14a	Protein phosphatase 1 regulatory subunit 14A	1	GPGGSPSGLQK	GPGGSPSGLQK	2	GPGGSPSGLQK2	43531	40933.9	34916.4
O55171	O55171;O88267;A1A5R4	ACOT2_RAT	Acot2	Acyl-coenzyme A thioesterase 2, mitochondrial	0	GPGIGLLGISK	GPGIGLLGISK	2	GPGIGLLGISK2	37791.7	35818.6	39970.4
P86252	P86252	PURA_RAT	Pura	Transcriptional activator protein Pur-alpha	1	GPGLGSTQGQTIALPAQGLIEFR	GPGLGSTQGQTIALPAQGLIEFR	3	GPGLGSTQGQTIALPAQGLIEFR3	218898	239147	254636
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	GPGLHGCQPGSVSVDK	GPGLHGC(UniMod:4)QPGSVSVDK	3	GPGLHGC(UniMod:4)QPGSVSVDK3	5373.06	5527.66	5705.76
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	GPGLHGCQPGSVSVDKK	GPGLHGC(UniMod:4)QPGSVSVDKK	4	GPGLHGC(UniMod:4)QPGSVSVDKK4	4647.77	4760.73	12949.1
P14740	P14740	DPP4_RAT	Dpp4	Dipeptidyl peptidase 4	1	GPGLPLYTLHR	GPGLPLYTLHR	3	GPGLPLYTLHR3	16465.1	12781.9	16586.4
P28064	P28064	PSB8_RAT	Psmb8	Proteasome subunit beta type-8	1	GPGLYYVDDNGTR	GPGLYYVDDNGTR	2	GPGLYYVDDNGTR2	147797	116290	155468
P28075	P28075	PSB5_RAT	Psmb5	Proteasome subunit beta type-5	1	GPGLYYVDSEGNR	GPGLYYVDSEGNR	2	GPGLYYVDSEGNR2	296107	233661	288568
Q9WVS2	Q9WVS2	OSGEP_RAT	Osgep	tRNA N6-adenosine threonylcarbamoyltransferase	1	GPGMGAPLASVAVVAR	GPGMGAPLASVAVVAR	2	GPGMGAPLASVAVVAR2	4496.17	8729.33	11546.6
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	GPGNVEQFR	GPGNVEQFR	2	GPGNVEQFR2	18709.3	16340.9	12834.9
P54777	P54777	PEX6_RAT	Pex6	Peroxisomal ATPase PEX6	1	GPGPPPLLVSR	GPGPPPLLVSR	2	GPGPPPLLVSR2	5388.27	4651.02	7314.78
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	GPGQDPQAALGALGK	GPGQDPQAALGALGK	2	GPGQDPQAALGALGK2	89338.5	92113.7	107984
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	GPGQDPQAALGALGK	GPGQDPQAALGALGK	3	GPGQDPQAALGALGK3	3334.23	4646.77	4453.64
B2RYF7	B2RYF7	WASH1_RAT	Washc1	WASH complex subunit 1	1	GPGTGTSEGPGGAFSR	GPGTGTSEGPGGAFSR	2	GPGTGTSEGPGGAFSR2	10242.4	6516.52	7880.98
Q3B7T9	Q3B7T9	RFIP1_RAT	Rab11fip1	Rab11 family-interacting protein 1	1	GPGTMWSPTHVQVTVLQAR	GPGTMWSPTHVQVTVLQAR	3	GPGTMWSPTHVQVTVLQAR3	9895.74	9458.63	12233.4
P11960	P11960	ODBA_RAT	Bckdha	2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment)	1	GPGYGIMSIR	GPGYGIMSIR	2	GPGYGIMSIR2	10704.6	7100.28	11304.4
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	GPHHLDNSSPGPGSEAR	GPHHLDNSSPGPGSEAR	3	GPHHLDNSSPGPGSEAR3			4691.64
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	GPHHLDNSSPGPGSEAR	GPHHLDNSSPGPGSEAR	4	GPHHLDNSSPGPGSEAR4	39177.5		5872.21
Q62902	Q62902	LMAN1_RAT	Lman1	Protein ERGIC-53	1	GPHLVQSDGTVPFWAHAGNAIPSADQIR	GPHLVQSDGTVPFWAHAGNAIPSADQIR	4	GPHLVQSDGTVPFWAHAGNAIPSADQIR4	207694	225256	225816
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	GPHMNNSVHMLLEDK	GPHMNNSVHMLLEDK	4	GPHMNNSVHMLLEDK4	2077.29	413.606	8011.63
Q3B7U1	Q3B7U1	Q3B7U1_RAT	Maged2	MAGE family member D2	1	GPIAFWAR	GPIAFWAR	2	GPIAFWAR2	85829.5	82486.3	88145.7
D3ZES7	D3ZPX4;A0A8I6AGW9;D3ZWP6;D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	0	GPIDAITGEAR	GPIDAITGEAR	2	GPIDAITGEAR2	62423.1	49279.9	58093.1
Q3MIB4	Q3MIB4	LONP2_RAT	Lonp2	Lon protease homolog 2, peroxisomal	1	GPILCFVGPPGVGK	GPILC(UniMod:4)FVGPPGVGK	2	GPILC(UniMod:4)FVGPPGVGK2	27487.7	20274.3	21443
D4A5G8	D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	GPILMELQTYR	GPILMELQTYR	2	GPILMELQTYR2	139926	131973	173545
Q9EPF2	Q9EPF2	MUC18_RAT	Mcam	Cell surface glycoprotein MUC18	1	GPILQLNNVK	GPILQLNNVK	2	GPILQLNNVK2	43230.1	39189.4	36766.7
D3Z9B0	D3Z9B0	D3Z9B0_RAT	Glod5	Glyoxalase domain containing 5	1	GPILSIYFR	GPILSIYFR	2	GPILSIYFR2	13553.6	19696.2	8752.65
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	GPISEEGLGASVMSLSSENPYATIR	GPISEEGLGASVMSLSSENPYATIR	3	GPISEEGLGASVMSLSSENPYATIR3	23259.3	24450	18282.4
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	GPITAVSFAPDGR	GPITAVSFAPDGR	2	GPITAVSFAPDGR2	13645	7465.03	9537.22
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	GPITSCDFDLR	GPITSC(UniMod:4)DFDLR	2	GPITSC(UniMod:4)DFDLR2	99546.2	114297	120924
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	GPIVESYIGFIESYRDPFGSR	GPIVESYIGFIESYRDPFGSR	3	GPIVESYIGFIESYRDPFGSR3	7744.32	8452.55	9752.98
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	GPIVTNEYHCLGCMHPISVDSPELGPVLK	GPIVTNEYHC(UniMod:4)LGC(UniMod:4)MHPISVDSPELGPVLK	4	GPIVTNEYHC(UniMod:4)LGC(UniMod:4)MHPISVDSPELGPVLK4	7.82454e+06	6.52108e+06	6.38679e+06
A0A8I6ASK6	A0A8I6ASK6	A0A8I6ASK6_RAT	Fcrl1	Fc receptor-like 1	1	GPIWMSK	GPIWMSK	1	GPIWMSK1	34435.2	26643.7	28478.3
A0A8I6ASK6	A0A8I6ASK6	A0A8I6ASK6_RAT	Fcrl1	Fc receptor-like 1	1	GPIWMSK	GPIWMSK	2	GPIWMSK2	2.95063e+06	2.33857e+06	2.85597e+06
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	GPIYLGGVAPGR	GPIYLGGVAPGR	2	GPIYLGGVAPGR2	35178	27974.5	30029.6
A0A8I6AEI1	A0A8I6AEI1	A0A8I6AEI1_RAT	Hps1	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1	1	GPLAAFVK	GPLAAFVK	2	GPLAAFVK2	23576.6	31029.2	32955.4
Q76MX4	Q76MX4	MAFG_RAT	Mafg	Transcription factor MafG	1	GPLAAGLGPLVPGK	GPLAAGLGPLVPGK	2	GPLAAGLGPLVPGK2	13776.2	9834.85	9913.82
Q5U2N3	Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	1	GPLADDWAR	GPLADDWAR	2	GPLADDWAR2	18067.5	13451.6	12824.6
D3ZF26	D3ZF26	D3ZF26_RAT	Tnks1bp1	Tankyrase 1 binding protein 1	1	GPLAELPSAR	GPLAELPSAR	2	GPLAELPSAR2	2631.24	773.403	2318.12
P21588	P21588	5NTD_RAT	Nt5e	5'-nucleotidase	1	GPLAPQISGLYLPYK	GPLAPQISGLYLPYK	2	GPLAPQISGLYLPYK2	13077.7	9907.96	17156
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	GPLATAFPSSEVK	GPLATAFPSSEVK	2	GPLATAFPSSEVK2	8873.86	2380.95	8165.91
Q4G063	Q4G063	CREL2_RAT	Creld2	Protein disulfide isomerase Creld2	1	GPLCIDCMDGYFSLQR	GPLC(UniMod:4)IDC(UniMod:4)MDGYFSLQR	2	GPLC(UniMod:4)IDC(UniMod:4)MDGYFSLQR2	21228.5	18462.2	14783
Q4G063	Q4G063	CREL2_RAT	Creld2	Protein disulfide isomerase Creld2	1	GPLCIDCMDGYFSLQR	GPLC(UniMod:4)IDC(UniMod:4)MDGYFSLQR	3	GPLC(UniMod:4)IDC(UniMod:4)MDGYFSLQR3	13560.3	13503.7	11978.6
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	GPLDCSER	GPLDC(UniMod:4)SER	2	GPLDC(UniMod:4)SER2	42787.6	46808.5	39877.4
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	GPLEAPQDGEAEEGTTSDGEKK	GPLEAPQDGEAEEGTTSDGEKK	3	GPLEAPQDGEAEEGTTSDGEKK3	12898.9	12020.4	9797.1
Q62921	Q62921	HOIL1_RAT	Rbck1	RanBP-type and C3HC4-type zinc finger-containing protein 1	1	GPLEPVLPKPR	GPLEPVLPKPR	3	GPLEPVLPKPR3	14547.4	12215.2	14408
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	GPLEYVPSAK	GPLEYVPSAK	2	GPLEYVPSAK2	237614	226290	231697
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	GPLFAFPDAVK	GPLFAFPDAVK	2	GPLFAFPDAVK2	29781.1	38084.3	20072.8
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	GPLGIDPQK	GPLGIDPQK	2	GPLGIDPQK2	59642	56518.4	57138.5
P16446	P16446;P53812	PIPNA_RAT	Pitpna	Phosphatidylinositol transfer protein alpha isoform	0	GPLGPNWK	GPLGPNWK	2	GPLGPNWK2	83181.4	75365.6	79649.2
D3ZUM4	D3ZUM4	D3ZUM4_RAT	Glb1	Beta-galactosidase	1	GPLINSEFYTGWLDHWGQPHSK	GPLINSEFYTGWLDHWGQPHSK	3	GPLINSEFYTGWLDHWGQPHSK3	7800.35	4835.51	5773.23
D3ZUM4	D3ZUM4	D3ZUM4_RAT	Glb1	Beta-galactosidase	1	GPLINSEFYTGWLDHWGQPHSK	GPLINSEFYTGWLDHWGQPHSK	4	GPLINSEFYTGWLDHWGQPHSK4	10735.1	11802.7	12108
A0A8I6A896	A0A8I6A896	A0A8I6A896_RAT	Ap4b1	AP complex subunit beta	1	GPLLAACSSESR	GPLLAAC(UniMod:4)SSESR	2	GPLLAAC(UniMod:4)SSESR2	2725.49	2238.97	3980.12
Q5FWT1	Q5FWT1	FA98A_RAT	Fam98a	Protein FAM98A	1	GPLLDDGALLQAVSAGAASPEFTK	GPLLDDGALLQAVSAGAASPEFTK	3	GPLLDDGALLQAVSAGAASPEFTK3	10402.8	9870.2	4778.53
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	GPLLGDMEGR	GPLLGDMEGR	2	GPLLGDMEGR2	14583.9	23780.8	21429.8
P70483	P70483	STRN_RAT	Strn	Striatin	1	GPLLGHTDAVWGLAYSAAHQR	GPLLGHTDAVWGLAYSAAHQR	3	GPLLGHTDAVWGLAYSAAHQR3	28305.7	34684.7	31568.9
P70483	P70483	STRN_RAT	Strn	Striatin	1	GPLLGHTDAVWGLAYSAAHQR	GPLLGHTDAVWGLAYSAAHQR	4	GPLLGHTDAVWGLAYSAAHQR4	146778	164873	150839
A0A0G2K8D1	A0A0G2K8D1	A0A0G2K8D1_RAT	Mospd2	Motile sperm domain containing 2	1	GPLLHISPAEELYFGSIESGEK	GPLLHISPAEELYFGSIESGEK	3	GPLLHISPAEELYFGSIESGEK3	16094.1	17536.4	16360.7
P04762	P04762	CATA_RAT	Cat	Catalase	1	GPLLVQDVVFTDEMAHFDR	GPLLVQDVVFTDEMAHFDR	3	GPLLVQDVVFTDEMAHFDR3	10885.7		7101.04
P04762	P04762	CATA_RAT	Cat	Catalase	1	GPLLVQDVVFTDEMAHFDRER	GPLLVQDVVFTDEMAHFDRER	3	GPLLVQDVVFTDEMAHFDRER3	10006.4	10370.9	
P04762	P04762	CATA_RAT	Cat	Catalase	1	GPLLVQDVVFTDEMAHFDRER	GPLLVQDVVFTDEMAHFDRER	4	GPLLVQDVVFTDEMAHFDRER4	24472.4	22923.4	20672.7
D3ZYB4	D3ZYB4	D3ZYB4_RAT	Lpin2	phosphatidate phosphatase	1	GPLMLSPSSLFSAFHR	GPLMLSPSSLFSAFHR	3	GPLMLSPSSLFSAFHR3	12238.2	8624.43	10925.2
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	GPLMMYISK	GPLMMYISK	2	GPLMMYISK2	100579	99323.2	85877.2
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	GPLPAAPPAAPER	GPLPAAPPAAPER	2	GPLPAAPPAAPER2	3.12415e+06	3.10229e+06	3.08055e+06
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	GPLPAAPPAAPER	GPLPAAPPAAPER	3	GPLPAAPPAAPER3	34974.7	43636.2	54073.8
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	GPLPMEAIEK	GPLPMEAIEK	2	GPLPMEAIEK2	126933	160394	180387
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	GPLPVTEELHIISAMVEYVYQGLK	GPLPVTEELHIISAMVEYVYQGLK	3	GPLPVTEELHIISAMVEYVYQGLK3		10860.1	14360.8
P62250	P62250	RS16_RAT	Rps16	Small ribosomal subunit protein uS9	1	GPLQSVQVFGR	GPLQSVQVFGR	2	GPLQSVQVFGR2	32251.9	34614.7	34332.6
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	GPLSCDSILK	GPLSC(UniMod:4)DSILK	2	GPLSC(UniMod:4)DSILK2	57591.3	64928.2	53144.9
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	GPLSENWIQEYK	GPLSENWIQEYK	2	GPLSENWIQEYK2	11039.4	5724.42	7077.62
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	GPLSQAPTPAPK	GPLSQAPTPAPK	2	GPLSQAPTPAPK2	1.25793e+06	1.15354e+06	1.20697e+06
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	GPLSQLCDTK	GPLSQLC(UniMod:4)DTK	2	GPLSQLC(UniMod:4)DTK2	9937.52	9785.84	4175.88
Q63686	Q63686	CDK16_RAT	Cdk16	Cyclin-dependent kinase 16	1	GPLSSAPEIVHEDMK	GPLSSAPEIVHEDMK	3	GPLSSAPEIVHEDMK3	8868.22	28683.2	14277.6
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	GPLTISAQESAK	GPLTISAQESAK	2	GPLTISAQESAK2	25563.4	28018.3	32853.9
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	GPLVFAGPIFMNHR	GPLVFAGPIFMNHR	3	GPLVFAGPIFMNHR3	23852.7	28459.1	18301.7
Q5BJP6	Q5BJP6	RRF2M_RAT	Gfm2	Ribosome-releasing factor 2, mitochondrial	1	GPLVFLR	GPLVFLR	2	GPLVFLR2	2967.57	1421.2	2288.95
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	GPLVNASLR	GPLVNASLR	2	GPLVNASLR2	86792.7	85701.8	108980
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	GPMYSFQLASETVVADSNSLETEK	GPMYSFQLASETVVADSNSLETEK	3	GPMYSFQLASETVVADSNSLETEK3		3703.61	4180.91
Q9WUD9	Q9WUD9	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	1	GPNAAFVPPAAAEPK	GPNAAFVPPAAAEPK	2	GPNAAFVPPAAAEPK2	301791	300317	293472
Q9WUD9	Q9WUD9	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	1	GPNAAFVPPAAAEPK	GPNAAFVPPAAAEPK	3	GPNAAFVPPAAAEPK3	23907.7	30036	26449.4
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	GPNAVQLVK	GPNAVQLVK	2	GPNAVQLVK2	11726.7	9005.65	10801.8
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	GPNCSEPECPGNCNLR	GPNC(UniMod:4)SEPEC(UniMod:4)PGNC(UniMod:4)NLR	2	GPNC(UniMod:4)SEPEC(UniMod:4)PGNC(UniMod:4)NLR2	37271	52487.8	49748.4
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	GPNCSEPECPGNCNLR	GPNC(UniMod:4)SEPEC(UniMod:4)PGNC(UniMod:4)NLR	3	GPNC(UniMod:4)SEPEC(UniMod:4)PGNC(UniMod:4)NLR3	16223.9	16094.3	22446.4
P49432	P49432	ODPB_RAT	Pdhb	Pyruvate dehydrogenase E1 component subunit beta, mitochondrial	1	GPNGASAGVAAQHSQCFAAWYGHCPGLK	GPNGASAGVAAQHSQC(UniMod:4)FAAWYGHC(UniMod:4)PGLK	4	GPNGASAGVAAQHSQC(UniMod:4)FAAWYGHC(UniMod:4)PGLK4	9940.12	7915.55	9287.16
P20070	P20070	NB5R3_RAT	Cyb5r3	NADH-cytochrome b5 reductase 3	1	GPNGLLVYQGK	GPNGLLVYQGK	2	GPNGLLVYQGK2	36404.1	44198.3	49355.9
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	GPNGYGFHLHGEK	GPNGYGFHLHGEK	2	GPNGYGFHLHGEK2	6549.23	1735.74	2590.62
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	GPNGYGFHLHGEK	GPNGYGFHLHGEK	3	GPNGYGFHLHGEK3	31581.2	14303.6	13046.8
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	GPNPFPQK	GPNPFPQK	2	GPNPFPQK2	13265.3	18489.1	16203.1
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	GPNSALVQQLIK	GPNSALVQQLIK	2	GPNSALVQQLIK2	56572.1	43190.8	46952.2
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	GPNSEDLNR	GPNSEDLNR	2	GPNSEDLNR2	4768.65		
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	GPNVLMPDRDREDEEEDEEEEETTDPK	GPNVLMPDRDREDEEEDEEEEETTDPK	4	GPNVLMPDRDREDEEEDEEEEETTDPK4	24081.3	16618.1	16326.9
P14056	P14056	ARAF_RAT	Araf	Serine/threonine-protein kinase A-Raf	1	GPPASGAEPSR	GPPASGAEPSR	2	GPPASGAEPSR2			15199.1
A0A096MKH4	A0A096MKH4	A0A096MKH4_RAT	Ube2j1	Ubiquitin-conjugating enzyme E2, J1	1	GPPDSDFDGGVYHGR	GPPDSDFDGGVYHGR	3	GPPDSDFDGGVYHGR3	3705.06		2026.35
A0A8I6G6W8	A0A8I5Y276;A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	GPPFSQER	GPPFSQER	2	GPPFSQER2	54681.9	51901.6	52470.2
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	GPPGDDVSIASPNVPETGTPK	GPPGDDVSIASPNVPETGTPK	3	GPPGDDVSIASPNVPETGTPK3	11858.6	1568.92	9305.95
Q63198	Q63198	CNTN1_RAT	Cntn1	Contactin-1	1	GPPGPPGGLR	GPPGPPGGLR	2	GPPGPPGGLR2	4445.88		6675.55
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	GPPLKPVLFGK	GPPLKPVLFGK	3	GPPLKPVLFGK3	34876.3	26848.3	27932
Q5I0H9	Q5I0H9	PDIA5_RAT	Pdia5	Protein disulfide-isomerase A5	1	GPPLWEEDPGAK	GPPLWEEDPGAK	2	GPPLWEEDPGAK2	30287.4	28818	27544.8
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	GPPPAPEGGSR	GPPPAPEGGSR	2	GPPPAPEGGSR2	24764.3	14476.8	18850.7
A0A8I5ZLY7	A0A8I5ZLY7	A0A8I5ZLY7_RAT	Tapbp	TAP binding protein	1	GPPPRPDLDPK	GPPPRPDLDPK	3	GPPPRPDLDPK3	96520.6	86730.6	74699.3
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	GPPQQHGHHSEFDDEFEDDDPLPAIGHCK	GPPQQHGHHSEFDDEFEDDDPLPAIGHC(UniMod:4)K	4	GPPQQHGHHSEFDDEFEDDDPLPAIGHC(UniMod:4)K4	30327.5	32340.1	32053.6
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	GPPQSPVFEGVYNNSR	GPPQSPVFEGVYNNSR	3	GPPQSPVFEGVYNNSR3		7852.69	4272.84
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	GPPSVSPPR	GPPSVSPPR	2	GPPSVSPPR2	62275.3	90805.9	84498
A0A0G2K1A4	A0A0G2K1A4	A0A0G2K1A4_RAT	Evi5l	Ecotropic viral integration site 5-like	1	GPPTFEDPLAFDGLSLTR	GPPTFEDPLAFDGLSLTR	2	GPPTFEDPLAFDGLSLTR2	5304.27	7277.08	9691.62
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	GPPVTPSSEK	GPPVTPSSEK	2	GPPVTPSSEK2	45615	27271.8	35444.1
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	GPQAVCK	GPQAVC(UniMod:4)K	1	GPQAVC(UniMod:4)K1			4287.86
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	GPQEVAVYVQEIQK	GPQEVAVYVQEIQK	2	GPQEVAVYVQEIQK2	11064.1	3432.92	6008.64
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	GPQEVAVYVQEIQK	GPQEVAVYVQEIQK	3	GPQEVAVYVQEIQK3	15783.5	12629.9	14742.5
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	GPQFISR	GPQFISR	1	GPQFISR1	114276	108503	113290
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	GPQFISR	GPQFISR	2	GPQFISR2	250710	138168	129252
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	GPQFISRDWHGVPGK	GPQFISRDWHGVPGK	3	GPQFISRDWHGVPGK3	8621.93	10427.3	10320.2
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	GPQFISRDWHGVPGK	GPQFISRDWHGVPGK	4	GPQFISRDWHGVPGK4	46906.6	49250.9	54680.2
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	GPQFISRDWHGVPGKVDAAMAGR	GPQFISRDWHGVPGKVDAAMAGR	4	GPQFISRDWHGVPGKVDAAMAGR4	11200.7	20160.2	24127.1
P34064	P34064	PSA5_RAT	Psma5	Proteasome subunit alpha type-5	1	GPQLFHMDPSGTFVQCDAR	GPQLFHMDPSGTFVQC(UniMod:4)DAR	3	GPQLFHMDPSGTFVQC(UniMod:4)DAR3	505522	545403	582161
D3ZUM4	D3ZUM4	D3ZUM4_RAT	Glb1	Beta-galactosidase	1	GPQMTLFVPR	GPQMTLFVPR	2	GPQMTLFVPR2	13911		14665.1
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	GPQPQLVQHLR	GPQPQLVQHLR	3	GPQPQLVQHLR3	2491.67	12408.2	6606.06
P0C5W1	P0C5W1	MAP1S_RAT	Map1s	Microtubule-associated protein 1S	1	GPQPSCPTVLFEK	GPQPSC(UniMod:4)PTVLFEK	2	GPQPSC(UniMod:4)PTVLFEK2	36523.2	30375.5	31900
F1MAA4	F1MAA4	F1MAA4_RAT	Atp13a2	ATPase cation transporting 13A2	1	GPQQQEESPEPVSVLR	GPQQQEESPEPVSVLR	2	GPQQQEESPEPVSVLR2	3056.5		
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	GPQQTLDSMR	GPQQTLDSMR	2	GPQQTLDSMR2	35922.8	27586.1	34567
D3ZHR2	D3ZHR2	ABCD1_RAT	Abcd1	ATP-binding cassette sub-family D member 1	1	GPQVPAGESTQEASGATTAK	GPQVPAGESTQEASGATTAK	2	GPQVPAGESTQEASGATTAK2	12323.4	11488.7	13542.8
D3ZHR2	D3ZHR2	ABCD1_RAT	Abcd1	ATP-binding cassette sub-family D member 1	1	GPQVPAGESTQEASGATTAK	GPQVPAGESTQEASGATTAK	3	GPQVPAGESTQEASGATTAK3	4675.95	3348.6	4275.41
B5DFC3	B5DFC3	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	1	GPQVQQPPPSNR	GPQVQQPPPSNR	2	GPQVQQPPPSNR2	13542.1	18551.6	11593.6
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	GPQVTVDGEAVALPVATAHVSVTAEGR	GPQVTVDGEAVALPVATAHVSVTAEGR	3	GPQVTVDGEAVALPVATAHVSVTAEGR3	47363.7	74556.3	57984.5
P20760	P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	1	GPQVYTMAPPK	GPQVYTMAPPK	2	GPQVYTMAPPK2	1.06626e+06	844192	920592
P20760	P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	1	GPQVYTMAPPK	GPQVYTMAPPK	3	GPQVYTMAPPK3	28690.6	16856	26140.3
P20760	P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	1	GPQVYTMAPPKEEMTQSQVSITCMVK	GPQVYTMAPPKEEMTQSQVSITC(UniMod:4)MVK	4	GPQVYTMAPPKEEMTQSQVSITC(UniMod:4)MVK4	38993.8	31318.7	45896.3
Q9QY17	Q9QY17	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	1	GPQYGTVEK	GPQYGTVEK	2	GPQYGTVEK2	134242	153306	142797
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	GPRDPPSEWT	GPRDPPSEWT	2	GPRDPPSEWT2	62573.5	81840.7	79798.5
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	GPRPQLTEVR	GPRPQLTEVR	3	GPRPQLTEVR3	78641.3	58747.2	67125.2
A0A8I6AT07	M0R4Q5;A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	0	GPSAAEVFK	GPSAAEVFK	2	GPSAAEVFK2	16653.1	13869.6	14775.9
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	GPSADGALGVSISAPGGAIASVPNWTLR	GPSADGALGVSISAPGGAIASVPNWTLR	3	GPSADGALGVSISAPGGAIASVPNWTLR3	7316.24	6895.21	2817.23
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	GPSAPNVK	GPSAPNVK	2	GPSAPNVK2	134018	132058	134933
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	GPSAQQQAR	GPSAQQQAR	2	GPSAQQQAR2			53619.4
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	GPSCQDCDTGYTR	GPSC(UniMod:4)QDC(UniMod:4)DTGYTR	2	GPSC(UniMod:4)QDC(UniMod:4)DTGYTR2	28392.5	27831.1	26349.2
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	GPSCQRPCPPGR	GPSC(UniMod:4)QRPC(UniMod:4)PPGR	3	GPSC(UniMod:4)QRPC(UniMod:4)PPGR3	267521		278944
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	GPSDPNNAALQSSLAR	GPSDPNNAALQSSLAR	2	GPSDPNNAALQSSLAR2	19076.8	17901.1	9868.17
A0A8I6B124	A0A8I6B124	A0A8I6B124_RAT	Zswim8	Zinc finger, SWIM-type containing 8	1	GPSEMSTIR	GPSEMSTIR	2	GPSEMSTIR2	8968.11	6572.18	13458.9
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	GPSFDVQVGLHELLGHGSGK	GPSFDVQVGLHELLGHGSGK	3	GPSFDVQVGLHELLGHGSGK3	2361.27	5909.37	
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	GPSFDVQVGLHELLGHGSGK	GPSFDVQVGLHELLGHGSGK	4	GPSFDVQVGLHELLGHGSGK4	1551.17	7995.22	9667.63
P32362	P32362	DCUP_RAT	Urod	Uroporphyrinogen decarboxylase (Fragment)	1	GPSFPEPLREER	GPSFPEPLREER	3	GPSFPEPLREER3	11943.3	11419.1	8003.45
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	GPSGLLLYNGQK	GPSGLLLYNGQK	2	GPSGLLLYNGQK2	10677.6	13032.6	13596.2
Q5EB81	Q5EB81	NB5R1_RAT	Cyb5r1	NADH-cytochrome b5 reductase 1	1	GPSGLLSYAGK	GPSGLLSYAGK	2	GPSGLLSYAGK2	14780.2	17973	18610.4
P02466	P02466	CO1A2_RAT	Col1a2	Collagen alpha-2(I) chain	1	GPSGPQGIR	GPSGPQGIR	2	GPSGPQGIR2	18146	18160.9	25181.6
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	GPSGQGQFLVQQVTLK	GPSGQGQFLVQQVTLK	2	GPSGQGQFLVQQVTLK2	317270	359400	335613
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	GPSGQGQFLVQQVTLK	GPSGQGQFLVQQVTLK	3	GPSGQGQFLVQQVTLK3	32154.4	18658.5	24609.5
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	GPSHVPSVSPPMR	GPSHVPSVSPPMR	3	GPSHVPSVSPPMR3	65397	56237.9	59279.6
B5DEH0	B5DEH0	LIMD1_RAT	Limd1	LIM domain-containing protein 1	1	GPSPASLHQHHF	GPSPASLHQHHF	3	GPSPASLHQHHF3	18966	16692.9	9877.36
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	GPSPGPELAATPASIFR	GPSPGPELAATPASIFR	2	GPSPGPELAATPASIFR2	26785.4	28404.1	13892.5
Q5M929	Q5M929	RN135_RAT	Rnf135	E3 ubiquitin-protein ligase RNF135	1	GPSQFSAWAMMK	GPSQFSAWAMMK	2	GPSQFSAWAMMK2	2980.61	1818.53	
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	GPSQVSSPSQPPQK	GPSQVSSPSQPPQK	2	GPSQVSSPSQPPQK2	6790.04	6625.39	10794
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	GPSRPSPGLQLYVDCK	GPSRPSPGLQLYVDC(UniMod:4)K	3	GPSRPSPGLQLYVDC(UniMod:4)K3	15548.9	13042.8	15961.4
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	GPSSEAMHLGHLVPFIFTK	GPSSEAMHLGHLVPFIFTK	3	GPSSEAMHLGHLVPFIFTK3	11044.5	18765.8	8190.71
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	GPSSEAMHLGHLVPFIFTK	GPSSEAMHLGHLVPFIFTK	4	GPSSEAMHLGHLVPFIFTK4	26307.2	23792	29679.3
D3ZGD0	D3ZGD0	D3ZGD0_RAT	Gemin5	Gem (nuclear organelle) associated protein 5	1	GPSSIYHQWATGSEGTLVQR	GPSSIYHQWATGSEGTLVQR	3	GPSSIYHQWATGSEGTLVQR3	2453.07		1527.5
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	GPSSLNHTPSIR	GPSSLNHTPSIR	3	GPSSLNHTPSIR3	18541	20379.2	4560.32
P13084	A0A8I5ZUQ5;D3ZXI2;D3ZP59;A0A8I6ANY4;P13084	NPM_RAT	Npm1	Nucleophosmin	0	GPSSVEDIK	GPSSVEDIK	2	GPSSVEDIK2	18272	4691.91	
A0A0G2K542	A0A0G2K542	A0A0G2K542_RAT	Ugp2	UTP--glucose-1-phosphate uridylyltransferase	1	GPSVDWGK	GPSVDWGK	2	GPSVDWGK2	44453.8	28694.5	24520.1
Q66HA4	Q66HA4	TAXB1_RAT	Tax1bp1	Tax1-binding protein 1 homolog	1	GPSWEDNVVCSQPAR	GPSWEDNVVC(UniMod:4)SQPAR	2	GPSWEDNVVC(UniMod:4)SQPAR2	6849.04	12434.4	12416.9
D3ZRX9	P37397;D3ZRX9	D3ZRX9_RAT	Cnn2	Calponin	0	GPSYGLSAEVK	GPSYGLSAEVK	2	GPSYGLSAEVK2	687881	664035	740181
Q5XFX0	Q5XFX0;P37805	TAGL2_RAT	Tagln2	Transgelin-2	0	GPSYGLSR	GPSYGLSR	2	GPSYGLSR2	1.65269e+06	1.63012e+06	1.53251e+06
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	GPSYSLR	GPSYSLR	2	GPSYSLR2	302382	331964	328294
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	GPTCNEFTGQCHCHAGFGGR	GPTC(UniMod:4)NEFTGQC(UniMod:4)HC(UniMod:4)HAGFGGR	4	GPTC(UniMod:4)NEFTGQC(UniMod:4)HC(UniMod:4)HAGFGGR4	7439.25	5585.98	3732.86
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	GPTEADELMK	GPTEADELMK	2	GPTEADELMK2	156283	149214	140269
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	GPTEADELMKR	GPTEADELMKR	3	GPTEADELMKR3	6740.57	4309.67	4290.14
P20650	P20650	PPM1A_RAT	Ppm1a	Protein phosphatase 1A	1	GPTEQLVSPEPEVHDIER	GPTEQLVSPEPEVHDIER	3	GPTEQLVSPEPEVHDIER3	6351.61	13194.8	11415.2
P35815	P35815	PPM1B_RAT	Ppm1b	Protein phosphatase 1B	1	GPTEQLVSPEPEVYEILR	GPTEQLVSPEPEVYEILR	3	GPTEQLVSPEPEVYEILR3	15177	15001.4	9389.99
B1WC88	B1WC88	CR032_RAT		UPF0729 protein C18orf32 homolog	1	GPTEVSDKK	GPTEVSDKK	2	GPTEVSDKK2			13545.5
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	GPTGPPSTLPLGTQTSSGSSTLSK	GPTGPPSTLPLGTQTSSGSSTLSK	3	GPTGPPSTLPLGTQTSSGSSTLSK3	28745.9	23504.7	39996
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	GPTHHFIK	GPTHHFIK	1	GPTHHFIK1	54240.5		34310.5
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	GPTHHFIK	GPTHHFIK	2	GPTHHFIK2	502566		343347
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	GPTHHFIKK	GPTHHFIKK	2	GPTHHFIKK2			21409.6
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	GPTLTVYK	GPTLTVYK	2	GPTLTVYK2	93734.1	103106	97103.9
Q9R080	Q9R080	GPSM1_RAT	Gpsm1	G-protein-signaling modulator 1	1	GPTMPDEDFFSLIQR	GPTMPDEDFFSLIQR	2	GPTMPDEDFFSLIQR2	61934.5	60793.7	57533.8
Q9R080	Q9R080	GPSM1_RAT	Gpsm1	G-protein-signaling modulator 1	1	GPTMPDEDFFSLIQR	GPTMPDEDFFSLIQR	3	GPTMPDEDFFSLIQR3	11938.4	20060.9	12379.2
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	GPTPAILESLISINNK	GPTPAILESLISINNK	2	GPTPAILESLISINNK2	6476	8226.74	7075.72
A0A8I5ZS17	A0A8I5ZS17	A0A8I5ZS17_RAT	Snx25	Sorting nexin 25	1	GPTSAADACR	GPTSAADAC(UniMod:4)R	2	GPTSAADAC(UniMod:4)R2			2500.18
D4A131	D4A131	D4A131_RAT	Mrpl4	Mitochondrial ribosomal protein L4	1	GPTSYYYMLPMK	GPTSYYYMLPMK	2	GPTSYYYMLPMK2	3092.47	1560.83	3390.59
B1WC42	B1WC42	B1WC42_RAT	Trip6	Thyroid hormone receptor interactor 6	1	GPTWVGSHGAAQR	GPTWVGSHGAAQR	3	GPTWVGSHGAAQR3	4044.15	5172.14	8696.52
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	GPVAEGPEDAQR	GPVAEGPEDAQR	2	GPVAEGPEDAQR2	12126.6	9395.18	7408.63
Q4FZT8	Q4FZT8	SPRY4_RAT	Spryd4	SPRY domain-containing protein 4	1	GPVAPAFALWDGELLTHSGLEVPK	GPVAPAFALWDGELLTHSGLEVPK	3	GPVAPAFALWDGELLTHSGLEVPK3	15193	12464	14116.1
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	GPVAPLNVADQK	GPVAPLNVADQK	2	GPVAPLNVADQK2	99455.5	99149.4	90540.4
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	GPVDAVQK	GPVDAVQK	2	GPVDAVQK2	8409.42	13317.8	11133
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	GPVDVPGGDTPK	GPVDVPGGDTPK	2	GPVDVPGGDTPK2	48398.2	54205.4	47057.3
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GPVGLAIDFPESK	GPVGLAIDFPESK	2	GPVGLAIDFPESK2	348262	450914	370968
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	GPVGLDQR	GPVGLDQR	2	GPVGLDQR2	95373.9	114813	106967
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	GPVGLEGLLTTK	GPVGLEGLLTTK	2	GPVGLEGLLTTK2	41294.5	40651.9	45406.5
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	GPVGNWGPPGDYPDR	GPVGNWGPPGDYPDR	2	GPVGNWGPPGDYPDR2	7848.99	7884.29	6766.87
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	GPVHLVHSENWVVYQYWNSK	GPVHLVHSENWVVYQYWNSK	4	GPVHLVHSENWVVYQYWNSK4	10292.4	29914.2	12913.2
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	GPVLEATAGDEMVK	GPVLEATAGDEMVK	2	GPVLEATAGDEMVK2	412175	387039	327255
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	GPVLEATAGDEMVK	GPVLEATAGDEMVK	3	GPVLEATAGDEMVK3	17991.8	20246.6	19234.1
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	GPVLEATAGDEMVKLPVK	GPVLEATAGDEMVKLPVK	2	GPVLEATAGDEMVKLPVK2	12773.6	23728.1	17529.5
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	GPVLEATAGDEMVKLPVK	GPVLEATAGDEMVKLPVK	3	GPVLEATAGDEMVKLPVK3	248935	264233	262024
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	GPVLESIVAR	GPVLESIVAR	2	GPVLESIVAR2	6311.34	13665.7	11211
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	GPVLEVIVSR	GPVLEVIVSR	2	GPVLEVIVSR2	3699.83	4106.02	5529.24
F1MAF8	F1MAF8	F1MAF8_RAT	Atg2b	Autophagy related 2B	1	GPVLPEAEQQLLR	GPVLPEAEQQLLR	2	GPVLPEAEQQLLR2	88767.8	91391.7	82357
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	GPVLVNIEK	GPVLVNIEK	2	GPVLVNIEK2	14791.1	17837.2	19590.2
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	GPVPGDLSQTSEDQSLSDFEISNR	GPVPGDLSQTSEDQSLSDFEISNR	3	GPVPGDLSQTSEDQSLSDFEISNR3	5228.26	1751.03	2424.38
O08984	O08984	LBR_RAT	Lbr	Delta(14)-sterol reductase LBR	1	GPVPLGTFQVTTPQR	GPVPLGTFQVTTPQR	2	GPVPLGTFQVTTPQR2	121052	98926.1	113368
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	GPVQVIQVK	GPVQVIQVK	2	GPVQVIQVK2	9344.4	10405.2	11096.2
D4A0T9	D4A0T9	D4A0T9_RAT	Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	1	GPVRDDIEIQVYR	GPVRDDIEIQVYR	3	GPVRDDIEIQVYR3	14538.8	16554.8	17080.4
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	GPVSGSPDSMNVSR	GPVSGSPDSMNVSR	2	GPVSGSPDSMNVSR2	16865.5	11528.4	14523.7
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	GPVTDLAYSHDGAFLAVCDASK	GPVTDLAYSHDGAFLAVC(UniMod:4)DASK	3	GPVTDLAYSHDGAFLAVC(UniMod:4)DASK3	231315	209189	216487
P62815	P62815	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	1	GPVVLAEDFLDIMGQPINPQCR	GPVVLAEDFLDIMGQPINPQC(UniMod:4)R	3	GPVVLAEDFLDIMGQPINPQC(UniMod:4)R3	5331.89	2167.96	
A2RUW1	A2RUW1	TOLIP_RAT	Tollip	Toll-interacting protein	1	GPVYIGELPQDFLR	GPVYIGELPQDFLR	2	GPVYIGELPQDFLR2	47789.4	46891.7	55339
Q499P8	Q499P8	RUSF1_RAT	Rusf1	RUS family member 1	1	GPWAALTTLSGLR	GPWAALTTLSGLR	2	GPWAALTTLSGLR2	11803.1	5516.68	12689.5
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	GPWCFTTDPSVR	GPWC(UniMod:4)FTTDPSVR	2	GPWC(UniMod:4)FTTDPSVR2	2.11686e+06	1.89413e+06	2.02181e+06
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	GPWCFTTDPSVR	GPWC(UniMod:4)FTTDPSVR	3	GPWC(UniMod:4)FTTDPSVR3	103800	72500.2	77492.7
F7FMS0	F7FMS0	F7FMS0_RAT	Mst1	Macrophage stimulating 1	1	GPWCYTTNR	GPWC(UniMod:4)YTTNR	2	GPWC(UniMod:4)YTTNR2	14331.3	14035.3	18260.2
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	GPWSDNSYEWNK	GPWSDNSYEWNK	2	GPWSDNSYEWNK2	104491	95237.2	83541.4
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	GPYAEVKPLSK	GPYAEVKPLSK	3	GPYAEVKPLSK3	19653.2	25047.6	26053.3
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	GPYDFDQIK	GPYDFDQIK	2	GPYDFDQIK2	216459	299972	257690
Q62751	Q62751	IREB2_RAT	Ireb2	Iron-responsive element-binding protein 2	1	GPYLLGVK	GPYLLGVK	2	GPYLLGVK2	6283.74	4759.34	6242.46
D3ZKG1	D3ZKG1	D3ZKG1_RAT	Mmut	Methylmalonyl-CoA mutase, mitochondrial	1	GPYPTMYTYRPWTIR	GPYPTMYTYRPWTIR	3	GPYPTMYTYRPWTIR3		16079.6	
P53565	P53565;A0A8I5ZR58	CUX1_RAT	Cux1	Homeobox protein cut-like 1	0	GQADYEDVK	GQADYEDVK	2	GQADYEDVK2	16192	10767.5	8842.63
Q9QYH7	Q9QYH7	GHRL_RAT	Ghrl	Appetite-regulating hormone	1	GQAEEAEEELEIR	GQAEEAEEELEIR	2	GQAEEAEEELEIR2	3271.83	3242.89	2690.43
P97586	P97586	CGRE1_RAT	Cgref1	Cell growth regulator with EF hand domain protein 1	1	GQAESEGDAPGPR	GQAESEGDAPGPR	2	GQAESEGDAPGPR2	895513	987287	832735
P97586	P97586	CGRE1_RAT	Cgref1	Cell growth regulator with EF hand domain protein 1	1	GQAESEGDAPGPREDAER	GQAESEGDAPGPREDAER	2	GQAESEGDAPGPREDAER2	12023.8	13551.5	1739.38
P97586	P97586	CGRE1_RAT	Cgref1	Cell growth regulator with EF hand domain protein 1	1	GQAESEGDAPGPREDAER	GQAESEGDAPGPREDAER	3	GQAESEGDAPGPREDAER3	215091	496106	254462
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	GQAFLCK	GQAFLC(UniMod:4)K	1	GQAFLC(UniMod:4)K1	11872	7633.16	9502.72
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	GQAFLCK	GQAFLC(UniMod:4)K	2	GQAFLC(UniMod:4)K2	506816	477183	520189
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	GQAGPEGVPPAPEEEK	GQAGPEGVPPAPEEEK	2	GQAGPEGVPPAPEEEK2	110530	103388	109447
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	GQAGPEGVPPAPEEEKK	GQAGPEGVPPAPEEEKK	3	GQAGPEGVPPAPEEEKK3	43016.2	50438.7	62245.7
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	GQAGTLAVGAEGGLR	GQAGTLAVGAEGGLR	2	GQAGTLAVGAEGGLR2	11390.2	10201.6	9660.65
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	GQALAVAPDGK	GQALAVAPDGK	2	GQALAVAPDGK2	251280	282008	274429
A0A8I6A371	A0A8I6A371	A0A8I6A371_RAT	Nmi	N-myc (and STAT) interactor	1	GQALITFEK	GQALITFEK	2	GQALITFEK2	21533.5	18634.6	13652.2
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	GQALPEVVAK	GQALPEVVAK	2	GQALPEVVAK2	9668.57	13190.4	13922.2
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	GQAMVFPYHRPSPGSESR	GQAMVFPYHRPSPGSESR	3	GQAMVFPYHRPSPGSESR3	11602	13838.5	13254.9
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	GQAMVFPYHRPSPGSESR	GQAMVFPYHRPSPGSESR	4	GQAMVFPYHRPSPGSESR4	40890	45768.4	33992.9
Q63525	Q63525	NUDC_RAT	Nudc	Nuclear migration protein nudC	1	GQAPVIDGELYNEVK	GQAPVIDGELYNEVK	2	GQAPVIDGELYNEVK2	8116.01	13476.4	17070.3
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	GQAQAIEFLK	GQAQAIEFLK	2	GQAQAIEFLK2	143060	158311	136886
Q5FVQ7	Q5FVQ7	F174A_RAT	Fam174a	Membrane protein FAM174A	1	GQAQSEGAGPR	GQAQSEGAGPR	2	GQAQSEGAGPR2			3269.36
M0RAD5	M0RAD5	M0RAD5_RAT	Clpp	ATP-dependent Clp protease proteolytic subunit	1	GQATDIAIQAEEIMK	GQATDIAIQAEEIMK	2	GQATDIAIQAEEIMK2	19939.7	16152.9	25652.3
M0RAD5	M0RAD5	M0RAD5_RAT	Clpp	ATP-dependent Clp protease proteolytic subunit	1	GQATDIAIQAEEIMK	GQATDIAIQAEEIMK	3	GQATDIAIQAEEIMK3	6941.98	6601.31	
A0A8I6ALF3	A0A8I6ALF3	A0A8I6ALF3_RAT	Fam117b	Family with sequence similarity 117, member B	1	GQATPCMR	GQATPC(UniMod:4)MR	2	GQATPC(UniMod:4)MR2	8071.18	11192.3	6569.52
Q62771	Q62771	STA5A_RAT	Stat5a	Signal transducer and activator of transcription 5A	1	GQATQLLEGLVQELQK	GQATQLLEGLVQELQK	2	GQATQLLEGLVQELQK2	4502.89		
Q62771	Q62771	STA5A_RAT	Stat5a	Signal transducer and activator of transcription 5A	1	GQATQLLEGLVQELQK	GQATQLLEGLVQELQK	3	GQATQLLEGLVQELQK3	1078.38	1396.64	3183.49
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	GQAVDYDGSR	GQAVDYDGSR	2	GQAVDYDGSR2	396194	356840	470971
Q02769	Q02769	FDFT_RAT	Fdft1	Squalene synthase	1	GQAVTLMMDATNMPAVK	GQAVTLMMDATNMPAVK	2	GQAVTLMMDATNMPAVK2	5065.23	2638.24	
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	GQCCPYCLEDTIPK	GQC(UniMod:4)C(UniMod:4)PYC(UniMod:4)LEDTIPK	2	GQC(UniMod:4)C(UniMod:4)PYC(UniMod:4)LEDTIPK2	32846.1	46824.9	30651
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	GQCCPYCLEDTIPKK	GQC(UniMod:4)C(UniMod:4)PYC(UniMod:4)LEDTIPKK	3	GQC(UniMod:4)C(UniMod:4)PYC(UniMod:4)LEDTIPKK3	13015.7	12819.2	15333.2
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	GQCDLELINVCNENSLFK	GQC(UniMod:4)DLELINVC(UniMod:4)NENSLFK	3	GQC(UniMod:4)DLELINVC(UniMod:4)NENSLFK3	157281	158153	186138
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	GQCEPATGVCQCQPNYWGK	GQC(UniMod:4)EPATGVC(UniMod:4)QC(UniMod:4)QPNYWGK	3	GQC(UniMod:4)EPATGVC(UniMod:4)QC(UniMod:4)QPNYWGK3	31858.3	27467.9	28521.6
A0A8I5ZJ62	A0A8I5ZJ62	A0A8I5ZJ62_RAT	Glipr2	GLI pathogenesis-related 2	1	GQCGENLAWASYDQTGK	GQC(UniMod:4)GENLAWASYDQTGK	2	GQC(UniMod:4)GENLAWASYDQTGK2	89158.9	77032.4	97878.6
A0A8I5ZJ62	A0A8I5ZJ62	A0A8I5ZJ62_RAT	Glipr2	GLI pathogenesis-related 2	1	GQCGENLAWASYDQTGK	GQC(UniMod:4)GENLAWASYDQTGK	3	GQC(UniMod:4)GENLAWASYDQTGK3	50830.1	53770.8	48937.9
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	GQCHLQFQFIHK	GQC(UniMod:4)HLQFQFIHK	2	GQC(UniMod:4)HLQFQFIHK2	2473.49	1583.61	
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	GQCHLQFQFIHK	GQC(UniMod:4)HLQFQFIHK	3	GQC(UniMod:4)HLQFQFIHK3	35523.7	37422.4	38574.8
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	GQCHLQFQFIHK	GQC(UniMod:4)HLQFQFIHK	4	GQC(UniMod:4)HLQFQFIHK4	33258.2	39944.4	34484.1
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	GQCSVTSGHCSCPPGFQGALCELPCKPGR	GQC(UniMod:4)SVTSGHC(UniMod:4)SC(UniMod:4)PPGFQGALC(UniMod:4)ELPC(UniMod:4)KPGR	4	GQC(UniMod:4)SVTSGHC(UniMod:4)SC(UniMod:4)PPGFQGALC(UniMod:4)ELPC(UniMod:4)KPGR4	72337.8	54086.7	70308
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	GQCVKPLFGAVTK	GQC(UniMod:4)VKPLFGAVTK	2	GQC(UniMod:4)VKPLFGAVTK2	4705.65	1035.12	2608.85
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	GQCVKPLFGAVTK	GQC(UniMod:4)VKPLFGAVTK	3	GQC(UniMod:4)VKPLFGAVTK3	57645.9	46617.1	37008.3
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	GQCVNTPGDFECK	GQC(UniMod:4)VNTPGDFEC(UniMod:4)K	2	GQC(UniMod:4)VNTPGDFEC(UniMod:4)K2	4942.06	5026.09	
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	GQDCIWGVHVEEDK	GQDC(UniMod:4)IWGVHVEEDK	2	GQDC(UniMod:4)IWGVHVEEDK2	1911.08	4397.82	2530.16
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	GQDCIWGVHVEEDK	GQDC(UniMod:4)IWGVHVEEDK	3	GQDC(UniMod:4)IWGVHVEEDK3	19470.9	27146.6	
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	GQDCIWGVHVEEDKR	GQDC(UniMod:4)IWGVHVEEDKR	3	GQDC(UniMod:4)IWGVHVEEDKR3	17006.3	26457.6	19480.2
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	GQDCIWGVHVEEDKR	GQDC(UniMod:4)IWGVHVEEDKR	4	GQDC(UniMod:4)IWGVHVEEDKR4	35656.6	49659.3	45684.9
Q3T1I4	Q3T1I4	PRRC1_RAT	Prrc1	Protein PRRC1	1	GQDDAPAGGIWGFIK	GQDDAPAGGIWGFIK	2	GQDDAPAGGIWGFIK2	16081.9	18646.5	37405.8
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	GQDDFLGNVMLR	GQDDFLGNVMLR	2	GQDDFLGNVMLR2	66872.2	65379.1	65344.1
A0A0G2K2M3	A0A0G2K2M3	A0A0G2K2M3_RAT	Stat6	Signal transducer and activator of transcription	1	GQDGSSQIENIQPFSAK	GQDGSSQIENIQPFSAK	2	GQDGSSQIENIQPFSAK2	2318.03	1832.3	
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	GQDHVVSDFSEHGR	GQDHVVSDFSEHGR	3	GQDHVVSDFSEHGR3	11222.5	9614.87	6034.36
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	GQDHVVSDFSEHGR	GQDHVVSDFSEHGR	4	GQDHVVSDFSEHGR4	16885.9	16177.6	14788.2
Q63468	Q63468	KPRA_RAT	Prpsap1	Phosphoribosyl pyrophosphate synthase-associated protein 1	1	GQDIFIIQTIPR	GQDIFIIQTIPR	2	GQDIFIIQTIPR2	14187.1	11142.8	7751.91
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	GQDIFQR	GQDIFQR	2	GQDIFQR2	15377.1		
Q68FR6	Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	1	GQDLAFPLSPDWQVDYESYTWR	GQDLAFPLSPDWQVDYESYTWR	3	GQDLAFPLSPDWQVDYESYTWR3	17268.4	27915	26000.3
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	GQDLSSPAFR	GQDLSSPAFR	2	GQDLSSPAFR2	2.96514e+07	3.33713e+07	3.52556e+07
Q63524	Q63524	TMED2_RAT	Tmed2	Transmembrane emp24 domain-containing protein 2	1	GQDMETEAHQNK	GQDMETEAHQNK	2	GQDMETEAHQNK2			10842.2
Q63524	Q63524	TMED2_RAT	Tmed2	Transmembrane emp24 domain-containing protein 2	1	GQDMETEAHQNK	GQDMETEAHQNK	3	GQDMETEAHQNK3			105540
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	GQDPDSTPLENFNIK	GQDPDSTPLENFNIK	2	GQDPDSTPLENFNIK2	43693.3	41045.6	35016.1
A0A0G2K1A4	A0A0G2K1A4	A0A0G2K1A4_RAT	Evi5l	Ecotropic viral integration site 5-like	1	GQDSLGQEVLFNVMK	GQDSLGQEVLFNVMK	2	GQDSLGQEVLFNVMK2		4688.72	10020.7
E9PSY0	E9PSY0	E9PSY0_RAT	Axl	receptor protein-tyrosine kinase	1	GQDTPEVLMDIGLTR	GQDTPEVLMDIGLTR	2	GQDTPEVLMDIGLTR2	27633	22737.2	21497.3
Q5M8C6	Q5M8C6	FGL1_RAT	Fgl1	Fibrinogen-like protein 1	1	GQEDSFIDLGGK	GQEDSFIDLGGK	2	GQEDSFIDLGGK2	15684	13171	19723.5
A0A8I6ASK1	A0A8I6ASK1	A0A8I6ASK1_RAT	P4ha2	procollagen-proline 4-dioxygenase	1	GQEFLRPCGTTEVD	GQEFLRPC(UniMod:4)GTTEVD	2	GQEFLRPC(UniMod:4)GTTEVD2	13877	16665.9	9529.72
Q9EPX4	Q9EPX4	P2Y12_RAT	P2ry12	P2Y purinoceptor 12	1	GQEGGDPSEETPM	GQEGGDPSEETPM	2	GQEGGDPSEETPM2	4409.4	2970.08	2228.67
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	GQELERK	GQELERK	2	GQELERK2			34464.1
Q925N6	Q925N6	IGSF1_RAT	Igsf1	Immunoglobulin superfamily member 1	1	GQELQIR	GQELQIR	2	GQELQIR2	13761.5	16156.6	13893.3
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	GQEMCADYSENTFTEYK	GQEMC(UniMod:4)ADYSENTFTEYK	3	GQEMC(UniMod:4)ADYSENTFTEYK3	33760.3	18662.8	18539.3
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	GQEMCADYSENTFTEYKK	GQEMC(UniMod:4)ADYSENTFTEYKK	3	GQEMC(UniMod:4)ADYSENTFTEYKK3	209624	145472	131004
A0A8I6ACU2	A0A8I6ACU2	A0A8I6ACU2_RAT	Ubap2l	Ubiquitin associated protein 2-like	1	GQENGLDGTK	GQENGLDGTK	2	GQENGLDGTK2	4858.83	2403.46	
Q6AYA5	Q6AYA5	T106B_RAT	Tmem106b	Transmembrane protein 106B	1	GQENQLVALIPYSDQR	GQENQLVALIPYSDQR	2	GQENQLVALIPYSDQR2	5986.79	7427.92	
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	GQENSDFVR	GQENSDFVR	2	GQENSDFVR2	980465	556041	586253
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	GQENSDFVRGDGTDLQDPAK	GQENSDFVRGDGTDLQDPAK	3	GQENSDFVRGDGTDLQDPAK3	145372	99082.4	78467.1
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	GQENSLSWAALDK	GQENSLSWAALDK	2	GQENSLSWAALDK2	5164.79	3410.65	5583.96
A0A8I6ASZ5	A0A8I6ASZ5	A0A8I6ASZ5_RAT	Tcf25	Transcription factor 25	1	GQEPLGPDALQFVLLDDDDAEEEGPK	GQEPLGPDALQFVLLDDDDAEEEGPK	3	GQEPLGPDALQFVLLDDDDAEEEGPK3	2616.38		
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	GQEPSVSLKPEAER	GQEPSVSLKPEAER	2	GQEPSVSLKPEAER2	1574.61	6265.63	2727.8
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	GQEPSVSLKPEAER	GQEPSVSLKPEAER	3	GQEPSVSLKPEAER3	113769	117777	124076
P35433	P35433	PUR1_RAT	Ppat	Amidophosphoribosyltransferase	1	GQESAGIVTSDGSSVPK	GQESAGIVTSDGSSVPK	2	GQESAGIVTSDGSSVPK2	1511.14	1791.32	
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	GQESEYGNITYPPALR	GQESEYGNITYPPALR	2	GQESEYGNITYPPALR2	28943.7	31041.8	32712.6
Q6IE64	Q6IE64	C1RL_RAT	C1rl	Complement C1r subcomponent-like protein	1	GQESHADIEAPEGFAVR	GQESHADIEAPEGFAVR	3	GQESHADIEAPEGFAVR3	31458.8	30849.1	35270.2
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	GQESQVPSNSK	GQESQVPSNSK	2	GQESQVPSNSK2			51604
P70541	P70541	EI2BG_RAT	Eif2b3	Translation initiation factor eIF-2B subunit gamma	1	GQESTEPVPGQK	GQESTEPVPGQK	2	GQESTEPVPGQK2	14848	10717.3	19454.8
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	GQETNEVCK	GQETNEVC(UniMod:4)K	2	GQETNEVC(UniMod:4)K2	194138		80279.6
P41562	P41562	IDHC_RAT	Idh1	Isocitrate dehydrogenase [NADP] cytoplasmic	1	GQETSTNPIASIFAWSR	GQETSTNPIASIFAWSR	2	GQETSTNPIASIFAWSR2		11304.2	10433.2
D3ZCD0	D3ZCD0	D3ZCD0_RAT	Tek	receptor protein-tyrosine kinase	1	GQEVYVK	GQEVYVK	2	GQEVYVK2	20090.5	11677.1	17983.2
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	GQFEDVTLYQGER	GQFEDVTLYQGER	2	GQFEDVTLYQGER2	881892	607015	593982
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	GQFEDVTLYQGER	GQFEDVTLYQGER	3	GQFEDVTLYQGER3	599357	535776	583486
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	GQFFTDSNGR	GQFFTDSNGR	2	GQFFTDSNGR2	10525.2	10522	14319
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	GQFGEGCASVCDCDHSDGCDPVHGHCR	GQFGEGC(UniMod:4)ASVC(UniMod:4)DC(UniMod:4)DHSDGC(UniMod:4)DPVHGHC(UniMod:4)R	4	GQFGEGC(UniMod:4)ASVC(UniMod:4)DC(UniMod:4)DHSDGC(UniMod:4)DPVHGHC(UniMod:4)R4	14880.3	15606.7	8728.7
B5DEP5	B5DEP5	B5DEP5_RAT	Trip4	Thyroid hormone receptor interactor 4	1	GQFIEDLITK	GQFIEDLITK	2	GQFIEDLITK2	5520.56	4801.33	3454.75
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	GQFNAFSYHFR	GQFNAFSYHFR	3	GQFNAFSYHFR3	15859.4	8003.75	15966.5
G3V6R7	G3V6R7	G3V6R7_RAT	Oxsm	3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial	1	GQFNEQNFVSK	GQFNEQNFVSK	2	GQFNEQNFVSK2	9620.87	6114.31	9695.67
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	GQFPLSIQPMGVR	GQFPLSIQPMGVR	2	GQFPLSIQPMGVR2	3.95087e+06	2.78808e+06	2.40559e+06
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	GQFPLSIQPMGVR	GQFPLSIQPMGVR	3	GQFPLSIQPMGVR3	65408.5	42962.3	43692.3
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	GQFSTDELVAEVEK	GQFSTDELVAEVEK	2	GQFSTDELVAEVEK2	114139	115015	113217
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	GQFSTDELVAEVEK	GQFSTDELVAEVEK	3	GQFSTDELVAEVEK3	3111.05		4449.67
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	GQFSTDELVAEVEKR	GQFSTDELVAEVEKR	2	GQFSTDELVAEVEKR2	19491.4	19097.5	15610.9
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	GQFSTDELVAEVEKR	GQFSTDELVAEVEKR	3	GQFSTDELVAEVEKR3	369993	377004	399706
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	GQGAAAAQQGGYEIPAR	GQGAAAAQQGGYEIPAR	2	GQGAAAAQQGGYEIPAR2	26862.5	33557	32283.3
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	GQGAAAAQQGGYEIPAR	GQGAAAAQQGGYEIPAR	3	GQGAAAAQQGGYEIPAR3	10438.2	6469.93	10260.6
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	GQGAPLLPESEK	GQGAPLLPESEK	2	GQGAPLLPESEK2	22778.3	33647.1	16778
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	GQGAPLLPESEKK	GQGAPLLPESEKK	3	GQGAPLLPESEKK3	15408.7	18993	38732.3
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	GQGASPVAMQK	GQGASPVAMQK	2	GQGASPVAMQK2	1.18775e+06	1.23444e+06	1.34949e+06
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	GQGIAATGNQSAPK	GQGIAATGNQSAPK	2	GQGIAATGNQSAPK2	1174.02	1654.89	1613.48
A0A8I5ZK89	A0A8I5ZK89	A0A8I5ZK89_RAT	Dock5	Dedicator of cytokinesis 5	1	GQGLWVSLK	GQGLWVSLK	2	GQGLWVSLK2	6893.53	9272.41	
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	GQGNTWLTAFVLK	GQGNTWLTAFVLK	2	GQGNTWLTAFVLK2	184576	176468	171792
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	GQGNTWLTAFVLK	GQGNTWLTAFVLK	3	GQGNTWLTAFVLK3	12388.8	19520.6	16730.9
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	GQGPDEPMDGASGENEHK	GQGPDEPMDGASGENEHK	3	GQGPDEPMDGASGENEHK3	7427.81	9342.46	8271.51
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	GQGPDEPMDGASGENEHKK	GQGPDEPMDGASGENEHKK	3	GQGPDEPMDGASGENEHKK3	9382.53	17810.4	16236.4
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	GQGPDEPMDGASGENEHKK	GQGPDEPMDGASGENEHKK	4	GQGPDEPMDGASGENEHKK4	3553.84	3378.42	5786.34
D4A0T9	D4A0T9	D4A0T9_RAT	Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	1	GQGQLDCVVAIGR	GQGQLDC(UniMod:4)VVAIGR	2	GQGQLDC(UniMod:4)VVAIGR2	3419.25	2705.49	
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	GQGRPDWAIFGR	GQGRPDWAIFGR	3	GQGRPDWAIFGR3	17964.8		
Q62598	Q62598	DSPP_RAT	Dspp	Dentin sialophosphoprotein	1	GQGSVSTEDDDSK	GQGSVSTEDDDSK	2	GQGSVSTEDDDSK2			39812.7
Q62598	Q62598	DSPP_RAT	Dspp	Dentin sialophosphoprotein	1	GQGSVSTEDDDSKEQEGSPNGR	GQGSVSTEDDDSKEQEGSPNGR	3	GQGSVSTEDDDSKEQEGSPNGR3			5409.84
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	GQGTASPGSVSDLAQTVK	GQGTASPGSVSDLAQTVK	2	GQGTASPGSVSDLAQTVK2	20192.3	23344.4	14845.8
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	GQGTEFNLTFR	GQGTEFNLTFR	2	GQGTEFNLTFR2	21046.6	26234.7	18328.3
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	GQGTHLPRPGEDEDEEDTALESALDTSLDR	GQGTHLPRPGEDEDEEDTALESALDTSLDR	4	GQGTHLPRPGEDEDEEDTALESALDTSLDR4	160216	177350	170859
Q5I0H9	Q5I0H9	PDIA5_RAT	Pdia5	Protein disulfide-isomerase A5	1	GQGTICWVDCGDAESR	GQGTIC(UniMod:4)WVDC(UniMod:4)GDAESR	2	GQGTIC(UniMod:4)WVDC(UniMod:4)GDAESR2	2729.21	5886.16	3778.31
Q5I0H9	Q5I0H9	PDIA5_RAT	Pdia5	Protein disulfide-isomerase A5	1	GQGTICWVDCGDAESRK	GQGTIC(UniMod:4)WVDC(UniMod:4)GDAESRK	3	GQGTIC(UniMod:4)WVDC(UniMod:4)GDAESRK3	5979.08	7806.16	5075.55
P01026	P01026	CO3_RAT	C3	Complement C3	1	GQGTLSVVTVYHAK	GQGTLSVVTVYHAK	2	GQGTLSVVTVYHAK2	179172	160422	131467
P01026	P01026	CO3_RAT	C3	Complement C3	1	GQGTLSVVTVYHAK	GQGTLSVVTVYHAK	3	GQGTLSVVTVYHAK3	59403.5	71182.2	42059.8
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	GQGTMLLR	GQGTMLLR	2	GQGTMLLR2	78540.6	80995.2	98790.7
A0A0G2K1L5	A0A0G2K1L5	A0A0G2K1L5_RAT	Reep2	Receptor expression-enhancing protein	1	GQGVLSEK	GQGVLSEK	1	GQGVLSEK1	1723.92	1662.3	1908.14
P52555	P52555	ERP29_RAT	Erp29	Endoplasmic reticulum resident protein 29	1	GQGVYLGMPGCLPAYDALAGQFIEASSR	GQGVYLGMPGC(UniMod:4)LPAYDALAGQFIEASSR	3	GQGVYLGMPGC(UniMod:4)LPAYDALAGQFIEASSR3	8700.06	12313.6	16300.5
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	GQGWPEEEDGEDVR	GQGWPEEEDGEDVR	2	GQGWPEEEDGEDVR2	100807	89720.7	90872.2
P15589	P15589	STS_RAT	Sts	Steryl-sulfatase	1	GQGYTTGLVGK	GQGYTTGLVGK	2	GQGYTTGLVGK2	8204.8	7906.02	9491.13
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	GQHCLQEEQVNNATVR	GQHC(UniMod:4)LQEEQVNNATVR	2	GQHC(UniMod:4)LQEEQVNNATVR2	4398.12	3559.48	6694.58
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	GQHCLQEEQVNNATVR	GQHC(UniMod:4)LQEEQVNNATVR	3	GQHC(UniMod:4)LQEEQVNNATVR3	30602.7	35285.8	31652.8
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	GQHDLESDVQQQLFK	GQHDLESDVQQQLFK	3	GQHDLESDVQQQLFK3	37276.6	30753	28436.7
D4ADT7	D4ADT7	D4ADT7_RAT	Nod1	Nucleotide-binding oligomerization domain containing 1	1	GQHEMEGVPAGCHSHIK	GQHEMEGVPAGC(UniMod:4)HSHIK	4	GQHEMEGVPAGC(UniMod:4)HSHIK4	6522.6	6557.85	8740.39
D4A9Y0	D4A9Y0	D4A9Y0_RAT	Sdf2l1	Stromal cell-derived factor 2-like 1	1	GQHEVHGMPSANAHNTWK	GQHEVHGMPSANAHNTWK	3	GQHEVHGMPSANAHNTWK3	4380.36	614.349	
D4A9Y0	D4A9Y0	D4A9Y0_RAT	Sdf2l1	Stromal cell-derived factor 2-like 1	1	GQHEVHGMPSANAHNTWK	GQHEVHGMPSANAHNTWK	4	GQHEVHGMPSANAHNTWK4	9881.86	6850.5	11256.1
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	GQHFCPDGSPSPCHEK	GQHFC(UniMod:4)PDGSPSPC(UniMod:4)HEK	2	GQHFC(UniMod:4)PDGSPSPC(UniMod:4)HEK2	4760.25	8877.9	12652.5
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	GQHFCPDGSPSPCHEK	GQHFC(UniMod:4)PDGSPSPC(UniMod:4)HEK	3	GQHFC(UniMod:4)PDGSPSPC(UniMod:4)HEK3	457506	431363	402609
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	GQHFCPDGSPSPCHEK	GQHFC(UniMod:4)PDGSPSPC(UniMod:4)HEK	4	GQHFC(UniMod:4)PDGSPSPC(UniMod:4)HEK4	596566	613421	618258
B2GV06	B2GV06	SCOT1_RAT	Oxct1	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial	1	GQHFILEEAITGDFALVK	GQHFILEEAITGDFALVK	3	GQHFILEEAITGDFALVK3	71360	88766.3	81312.5
B1WC42	B1WC42	B1WC42_RAT	Trip6	Thyroid hormone receptor interactor 6	1	GQHFYAVER	GQHFYAVER	2	GQHFYAVER2	4126.01	4830.28	1104.74
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	GQHPLEEVK	GQHPLEEVK	2	GQHPLEEVK2	2942.64	2870.5	
Q2TGI5	Q2TGI5	ZDH24_RAT	Zdhhc24	Probable palmitoyltransferase ZDHHC24	1	GQHSYDLGMSHNLQAALGPR	GQHSYDLGMSHNLQAALGPR	4	GQHSYDLGMSHNLQAALGPR4	4012.38	2529.93	
D3ZHA0	D3ZHA0;A0A8I5ZV49	FLNC_RAT	Flnc	Filamin-C	0	GQHVPGSPFQFTVGPLGEGGAHK	GQHVPGSPFQFTVGPLGEGGAHK	3	GQHVPGSPFQFTVGPLGEGGAHK3	620113	535281	513327
D3ZHA0	D3ZHA0;A0A8I5ZV49	FLNC_RAT	Flnc	Filamin-C	0	GQHVPGSPFQFTVGPLGEGGAHK	GQHVPGSPFQFTVGPLGEGGAHK	4	GQHVPGSPFQFTVGPLGEGGAHK4	1.74811e+06	1.60591e+06	1.74402e+06
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	GQHVTGSPFQFTVGPLGEGGAHK	GQHVTGSPFQFTVGPLGEGGAHK	3	GQHVTGSPFQFTVGPLGEGGAHK3	8524.45		
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	GQHVTGSPFQFTVGPLGEGGAHK	GQHVTGSPFQFTVGPLGEGGAHK	4	GQHVTGSPFQFTVGPLGEGGAHK4	131089	20564.2	9249.66
P05369	P05369	FPPS_RAT	Fdps	Farnesyl pyrophosphate synthase	1	GQICWYQK	GQIC(UniMod:4)WYQK	2	GQIC(UniMod:4)WYQK2	6616.25	8490.85	8469.57
P21213	P21213	HUTH_RAT	Hal	Histidine ammonia-lyase	1	GQIEVAFR	GQIEVAFR	2	GQIEVAFR2	5699.95	3867.3	
P52873	P52873	PYC_RAT	Pc	Pyruvate carboxylase, mitochondrial	1	GQIGAPMPGK	GQIGAPMPGK	2	GQIGAPMPGK2	7814.48	7565.76	4730
Q05754	Q05754	DOPO_RAT	Dbh	Dopamine beta-hydroxylase	1	GQIHLDTHQDYQLLQAQR	GQIHLDTHQDYQLLQAQR	4	GQIHLDTHQDYQLLQAQR4	22829.9	22496	13352.5
D3ZYT2	D3ZYT2	D3ZYT2_RAT	Mrps5	Mitochondrial ribosomal protein S5	1	GQIIGEGR	GQIIGEGR	2	GQIIGEGR2	23317.1	16694.3	21356.4
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	GQIILLDQSTPILK	GQIILLDQSTPILK	2	GQIILLDQSTPILK2	37474.8	38896.7	51895.8
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	GQIILLDQSTPILK	GQIILLDQSTPILK	3	GQIILLDQSTPILK3			2144.49
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	GQIINVLSK	GQIINVLSK	2	GQIINVLSK2	35879.4	43217.8	34931.5
Q8K4B7	Q8K4B7	FMO4_RAT	Fmo4	Dimethylaniline monooxygenase [N-oxide-forming] 4	1	GQILHSQEYR	GQILHSQEYR	3	GQILHSQEYR3	3991.55	5356.93	5260.91
P62912	P62912;A0A8L2ULN5;D4A412	RL32_RAT	Rpl32	Large ribosomal subunit protein eL32	0	GQILMPNIGYGSNK	GQILMPNIGYGSNK	2	GQILMPNIGYGSNK2	17512.3	20972.7	16440.5
Q06647	Q06647	ATPO_RAT	Atp5po	ATP synthase subunit O, mitochondrial	1	GQILNLEVK	GQILNLEVK	2	GQILNLEVK2	482141	499897	426971
Q99M64	Q99M64	P4K2A_RAT	Pi4k2a	Phosphatidylinositol 4-kinase type 2-alpha	1	GQILNLTQALK	GQILNLTQALK	2	GQILNLTQALK2	11238	6239.19	6982.08
Q5XIL2	Q5XIL2	P4K2B_RAT	Pi4k2b	Phosphatidylinositol 4-kinase type 2-beta	1	GQILNLTQALR	GQILNLTQALR	2	GQILNLTQALR2	9475.51	6963.5	8821.84
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	GQILSILK	GQILSILK	2	GQILSILK2	80419.9	66886.3	85019.3
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	GQIMAMSR	GQIMAMSR	1	GQIMAMSR1	40145	42040.1	47659.6
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	GQIMAMSR	GQIMAMSR	2	GQIMAMSR2	6.28434e+06	7.29039e+06	6.84601e+06
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	GQIMAMSREPR	GQIMAMSREPR	3	GQIMAMSREPR3	194640	285668	219295
P22734	P22734	COMT_RAT	Comt	Catechol O-methyltransferase	1	GQIMDAVIR	GQIMDAVIR	2	GQIMDAVIR2	126838	95721.2	125518
F7FHP0	F7FHP0	F7FHP0_RAT	Angptl3	Angiopoietin-like 3	1	GQINDIFQK	GQINDIFQK	2	GQINDIFQK2	55240.7	44158.6	43386
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	GQIPQILYYR	GQIPQILYYR	2	GQIPQILYYR2	57364.3	67794.1	39959.3
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	GQIQEIVLVGGSTR	GQIQEIVLVGGSTR	2	GQIQEIVLVGGSTR2	38642.2	35534.8	30770
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	GQIQEIVLVGGSTR	GQIQEIVLVGGSTR	3	GQIQEIVLVGGSTR3	14703.5	11784.8	14237.7
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	GQISEPLK	GQISEPLK	1	GQISEPLK1	9377.08	6952.92	5518.83
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	GQISEPLK	GQISEPLK	2	GQISEPLK2	379069	383593	355327
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	GQIYILPIQVNPVNDPPR	GQIYILPIQVNPVNDPPR	3	GQIYILPIQVNPVNDPPR3	4617.73	2370.58	2173.89
B5DF86	B5DF86	B5DF86_RAT	Cog8	Conserved oligomeric Golgi complex subunit 8	1	GQLAPVFQR	GQLAPVFQR	2	GQLAPVFQR2	21099.1	20031.6	23168
Q63009	Q63009;A0A0G2K9I8	ANM1_RAT	Prmt1	Protein arginine N-methyltransferase 1	0	GQLCELSCSTDYR	GQLC(UniMod:4)ELSC(UniMod:4)STDYR	2	GQLC(UniMod:4)ELSC(UniMod:4)STDYR2	28524.4	30352.2	25989
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	GQLESTLR	GQLESTLR	2	GQLESTLR2	36901.7	39813.3	41967.1
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	GQLETYK	GQLETYK	2	GQLETYK2	58674.5	56655.2	39202.3
O88902	O88902	PTN23_RAT	Ptpn23	Tyrosine-protein phosphatase non-receptor type 23 (Fragment)	1	GQLGDAGALDAVWR	GQLGDAGALDAVWR	2	GQLGDAGALDAVWR2	10501.4		
D4ADG2	D4ADG2	D4ADG2_RAT	Iba57	Iron-sulfur cluster assembly factor IBA57	1	GQLGDLQDYHIYR	GQLGDLQDYHIYR	3	GQLGDLQDYHIYR3	12285.5	6396.35	6259.43
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	GQLGRPILDVPYWNAK	GQLGRPILDVPYWNAK	3	GQLGRPILDVPYWNAK3	12150.1	11382.2	17079.9
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	GQLINVMNK	GQLINVMNK	2	GQLINVMNK2	15873	15398	14971.9
A0A0G2JTX7	A0A0G2JTX7	A0A0G2JTX7_RAT	Col6a5	Collagen type VI alpha 5 chain	1	GQLLPITGNSEK	GQLLPITGNSEK	2	GQLLPITGNSEK2	14500.9	14076.9	10740.1
P85171	P85171	MDGA1_RAT	Mdga1	MAM domain-containing glycosylphosphatidylinositol anchor protein 1	1	GQLLPPPPVLPAAAAEGPDHAELR	GQLLPPPPVLPAAAAEGPDHAELR	3	GQLLPPPPVLPAAAAEGPDHAELR3	5435.62	13922.8	8289.38
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	GQLLVSEEPLHAR	GQLLVSEEPLHAR	2	GQLLVSEEPLHAR2	27937.7	31774.5	27170.7
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	GQLLVSEEPLHAR	GQLLVSEEPLHAR	3	GQLLVSEEPLHAR3	83896.3	105111	106511
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	GQLNADEISLRPAQSFLMNK	GQLNADEISLRPAQSFLMNK	3	GQLNADEISLRPAQSFLMNK3	21773.8	23111.1	24528.2
A0A8J8YRV3	A0A8J8YRV3	A0A8J8YRV3_RAT	Drg1	Developmentally regulated GTP binding protein 1	1	GQLPDYTSPVVLPYSR	GQLPDYTSPVVLPYSR	2	GQLPDYTSPVVLPYSR2	6129.09	5443.28	5066.04
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	GQLQEAIEHYR	GQLQEAIEHYR	3	GQLQEAIEHYR3	12711.1	10682	15093.1
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	GQLQELSTR	GQLQELSTR	2	GQLQELSTR2	41287.2	44895.3	48030.1
Q498D5	Q498D5	RMD2_RAT	Rmdn2	Regulator of microtubule dynamics protein 2	1	GQLQILEK	GQLQILEK	2	GQLQILEK2	4348.5	2331.37	8851.03
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	GQLSEQLHCLELQGELR	GQLSEQLHC(UniMod:4)LELQGELR	3	GQLSEQLHC(UniMod:4)LELQGELR3	15188.5	30380.6	23070.4
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	GQLSEQLHCLELQGELRR	GQLSEQLHC(UniMod:4)LELQGELRR	3	GQLSEQLHC(UniMod:4)LELQGELRR3	9327.98	10524	21139.1
Q5FVN0	Q5FVN0	MBOA5_RAT	Lpcat3	Lysophospholipid acyltransferase 5	1	GQLTDVPGK	GQLTDVPGK	1	GQLTDVPGK1	2697.03		
Q5FVN0	Q5FVN0	MBOA5_RAT	Lpcat3	Lysophospholipid acyltransferase 5	1	GQLTDVPGK	GQLTDVPGK	2	GQLTDVPGK2	369913	347477	344439
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	GQLTEASSATSK	GQLTEASSATSK	2	GQLTEASSATSK2	25187.3	17220.2	18646.8
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	GQLTNIVSPTAATTPR	GQLTNIVSPTAATTPR	2	GQLTNIVSPTAATTPR2	13537	13883.2	14213.7
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	GQLTSSMVDDVFYIVK	GQLTSSMVDDVFYIVK	2	GQLTSSMVDDVFYIVK2	11569.3	9266.4	10175.7
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	GQLVEFLR	GQLVEFLR	2	GQLVEFLR2	91855.4	109330	82697.7
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	GQLVESVGWNK	GQLVESVGWNK	2	GQLVESVGWNK2	17530.5	23808.9	21271
B2RYG8	B2RYG8	ELP6_RAT	Elp6	Elongator complex protein 6	1	GQLVFLEGLK	GQLVFLEGLK	2	GQLVFLEGLK2	4773.58	8781.88	
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	GQLVPNLK	GQLVPNLK	1	GQLVPNLK1	170071	76698.7	93920.9
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	GQLVPNLK	GQLVPNLK	2	GQLVPNLK2	5.551e+06	4.26946e+06	4.32236e+06
Q9JJ05	Q9JJ05	C1GLT_RAT	C1galt1	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1	1	GQMDFNADSSQHK	GQMDFNADSSQHK	2	GQMDFNADSSQHK2	638.154	2661.13	0
Q9JJ05	Q9JJ05	C1GLT_RAT	C1galt1	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1	1	GQMDFNADSSQHK	GQMDFNADSSQHK	3	GQMDFNADSSQHK3	37681.3	39648.2	38077.1
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GQMIYWTDVTTQGSMIR	GQMIYWTDVTTQGSMIR	3	GQMIYWTDVTTQGSMIR3	9021.32	13048.1	5772
F1MAA4	F1MAA4	F1MAA4_RAT	Atp13a2	ATPase cation transporting 13A2	1	GQMLLPLVPEPCHLPPGPLLR	GQMLLPLVPEPC(UniMod:4)HLPPGPLLR	3	GQMLLPLVPEPC(UniMod:4)HLPPGPLLR3		10108.1	
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	GQNALVELQTQRPVALELYK	GQNALVELQTQRPVALELYK	3	GQNALVELQTQRPVALELYK3	50806.1	36048.7	47196.8
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	GQNAWFLPPQADIVATK	GQNAWFLPPQADIVATK	2	GQNAWFLPPQADIVATK2	34789.6	39625.7	33847
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	GQNAWFLPPQADIVATK	GQNAWFLPPQADIVATK	3	GQNAWFLPPQADIVATK3	20746.2	34815.4	51365.8
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	GQNEDPGSLLTQFR	GQNEDPGSLLTQFR	2	GQNEDPGSLLTQFR2	116930	100250	92000.7
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	GQNEDPGSLLTQFR	GQNEDPGSLLTQFR	3	GQNEDPGSLLTQFR3	17657.9	15443.8	21888.7
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	GQNLDVVQMPR	GQNLDVVQMPR	2	GQNLDVVQMPR2	7667.67	12863.3	7116.11
P70473	P70473	AMACR_RAT	Amacr	Alpha-methylacyl-CoA racemase	1	GQNLLDGGAPFYTTYK	GQNLLDGGAPFYTTYK	2	GQNLLDGGAPFYTTYK2	4061.23	6477.87	3855.11
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	GQNSFQISLEISYMGSR	GQNSFQISLEISYMGSR	2	GQNSFQISLEISYMGSR2	208631	168820	131889
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	GQNSFQISLEISYMGSR	GQNSFQISLEISYMGSR	3	GQNSFQISLEISYMGSR3	234224	203883	166781
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	GQNSFQISLEISYMGSRPASNMVIADVK	GQNSFQISLEISYMGSRPASNMVIADVK	4	GQNSFQISLEISYMGSRPASNMVIADVK4	489639	547681	561386
P63322	P63322	RALA_RAT	Rala	Ras-related protein Ral-A	1	GQNSLALHK	GQNSLALHK	2	GQNSLALHK2	19107.4	8332.87	5856.38
A0A8I5ZVT2	A0A8I5ZVT2	A0A8I5ZVT2_RAT	Fndc3a	Fibronectin type III domain containing 3a	1	GQNTSGVNTGSAR	GQNTSGVNTGSAR	2	GQNTSGVNTGSAR2	3965.34		7499.67
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	GQNTYEEAAVYIQR	GQNTYEEAAVYIQR	2	GQNTYEEAAVYIQR2	148681	137339	171847
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	GQNTYEEAAVYIQR	GQNTYEEAAVYIQR	3	GQNTYEEAAVYIQR3	54161.3	50500.2	67433.3
F1LP90	A0A0G2K490;A0A8I5ZLV4;F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	0	GQNVLLTENAEVK	GQNVLLTENAEVK	2	GQNVLLTENAEVK2	296288	317270	357689
F1LP90	A0A0G2K490;A0A8I5ZLV4;F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	0	GQNVLLTENAEVK	GQNVLLTENAEVK	3	GQNVLLTENAEVK3	2429.46	4178.65	1687.32
Q63377	A0A8I6AFS5;Q63377	AT1B3_RAT	Atp1b3	Sodium/potassium-transporting ATPase subunit beta-3	0	GQPCVLVK	GQPC(UniMod:4)VLVK	2	GQPC(UniMod:4)VLVK2	262629	268763	277318
P21708	P21708	MK03_RAT	Mapk3	Mitogen-activated protein kinase 3	1	GQPFDVGPR	GQPFDVGPR	2	GQPFDVGPR2	34938.1	44766.5	16647.8
Q5XI07	Q5XI07	LPP_RAT	Lpp	Lipoma-preferred partner homolog	1	GQPFYAVEK	GQPFYAVEK	2	GQPFYAVEK2		28537.9	42751.4
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	GQPIPNK	GQPIPNK	1	GQPIPNK1	374890	577138	333445
Q924C3	Q924C3	ENPP1_RAT	Enpp1	Ectonucleotide pyrophosphatase/phosphodiesterase family member 1	1	GQPIWVTANHQEVR	GQPIWVTANHQEVR	3	GQPIWVTANHQEVR3	13280	19027.5	11993.1
Q00438	Q00438	PTBP1_RAT	Ptbp1	Polypyrimidine tract-binding protein 1	1	GQPIYIQFSNHK	GQPIYIQFSNHK	2	GQPIYIQFSNHK2	12363.4		
Q00438	Q00438	PTBP1_RAT	Ptbp1	Polypyrimidine tract-binding protein 1	1	GQPIYIQFSNHK	GQPIYIQFSNHK	3	GQPIYIQFSNHK3	33522.5	29218.5	36397.2
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	GQPLGPAGVQVSLR	GQPLGPAGVQVSLR	2	GQPLGPAGVQVSLR2	21369.3	31953.5	38381.5
O08651	O08651	SERA_RAT	Phgdh	D-3-phosphoglycerate dehydrogenase	1	GQPLLLFR	GQPLLLFR	2	GQPLLLFR2	17692.2	17388.9	13737
P0CE43	P0CE43	GRB10_RAT	Grb10	Growth factor receptor-bound protein 10	1	GQPQASPR	GQPQASPR	2	GQPQASPR2			29523.2
Q9ES58	Q9ES58	MO2R1_RAT	Cd200r1	Cell surface glycoprotein CD200 receptor 1	1	GQPSCIISYK	GQPSC(UniMod:4)IISYK	2	GQPSC(UniMod:4)IISYK2	50857.8	55594.3	51447.6
P97711	P97711	GRK6_RAT	Grk6	G protein-coupled receptor kinase 6	1	GQPTAPPK	GQPTAPPK	2	GQPTAPPK2			22485.7
Q6AYU3	Q6AYU3	DNJB6_RAT	Dnajb6	DnaJ homolog subfamily B member 6	1	GQPTPALAPGPAPAPAR	GQPTPALAPGPAPAPAR	2	GQPTPALAPGPAPAPAR2	2726.55		4611.65
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	GQPVDLSGMPPAPEDLK	GQPVDLSGMPPAPEDLK	2	GQPVDLSGMPPAPEDLK2	14100	31047.1	23688.9
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	GQQELLYVVPFVAK	GQQELLYVVPFVAK	2	GQQELLYVVPFVAK2		2962.88	3135.24
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	GQQKAHVSFKPTVAQQR	GQQKAHVSFKPTVAQQR	4	GQQKAHVSFKPTVAQQR4	12807.7	11238.6	14499.7
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	GQQLVMMPNK	GQQLVMMPNK	2	GQQLVMMPNK2	202394	204312	218730
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	GQRPDFTDAIILR	GQRPDFTDAIILR	3	GQRPDFTDAIILR3	37223.6	48853.4	44413.4
D3ZQQ1	D3ZQQ1	D3ZQQ1_RAT	Aftph	Aftiphilin	1	GQSDVVLSATSK	GQSDVVLSATSK	2	GQSDVVLSATSK2	7887.47	10782.7	8083.14
Q9EPF2	Q9EPF2	MUC18_RAT	Mcam	Cell surface glycoprotein MUC18	1	GQSEPGEYEHR	GQSEPGEYEHR	2	GQSEPGEYEHR2	5058.28		
Q9EPF2	Q9EPF2	MUC18_RAT	Mcam	Cell surface glycoprotein MUC18	1	GQSEPGEYEHR	GQSEPGEYEHR	3	GQSEPGEYEHR3	17462.7		
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	GQSEVSTAQLQER	GQSEVSTAQLQER	2	GQSEVSTAQLQER2	118874	120915	141308
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	GQSEVSTAQLQER	GQSEVSTAQLQER	3	GQSEVSTAQLQER3	2881.14	5580.78	11420.6
Q5I0L4	Q5I0L4	NUBP1_RAT	Nubp1	Cytosolic Fe-S cluster assembly factor NUBP1	1	GQSFFVEAPDSPATAAYK	GQSFFVEAPDSPATAAYK	2	GQSFFVEAPDSPATAAYK2	18251.7	6845.5	16679.2
A0A8I6AK45	A0A8I6AK45	A0A8I6AK45_RAT	Mtch2	Mitochondrial carrier 2	1	GQSGAPGLR	GQSGAPGLR	2	GQSGAPGLR2	8537.37		13419.1
D3ZU63	D3ZU63	D3ZU63_RAT	Stard13	StAR-related lipid transfer domain containing 13	1	GQSGHHFADGTPVLEGTLVGGSLPQSPR	GQSGHHFADGTPVLEGTLVGGSLPQSPR	4	GQSGHHFADGTPVLEGTLVGGSLPQSPR4	5746.72	6140.71	8467.87
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	GQSLDDLQTR	GQSLDDLQTR	2	GQSLDDLQTR2	21160.5	16694	19599.1
A0A8I6GBD2	A0A8I6GBD2	A0A8I6GBD2_RAT	Actr10	Actin related protein 10	1	GQSLPSVMGSVPESVLEDIK	GQSLPSVMGSVPESVLEDIK	3	GQSLPSVMGSVPESVLEDIK3	28952.3	33107.1	37060.7
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	GQSPLHILGQYGK	GQSPLHILGQYGK	2	GQSPLHILGQYGK2	5418.57	13757.2	18028.9
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	GQSPLHILGQYGK	GQSPLHILGQYGK	3	GQSPLHILGQYGK3	35463.3	49427.7	60859.7
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	GQSPVVFILTR	GQSPVVFILTR	2	GQSPVVFILTR2	1341.29	3567.06	1130.56
Q6AYE5	Q6AYE5	OAF_RAT	Oaf	Out at first protein homolog	1	GQSQFQALCFVTR	GQSQFQALC(UniMod:4)FVTR	2	GQSQFQALC(UniMod:4)FVTR2	3211.94	2828.13	2008.86
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	GQSQLSNPTDDSWK	GQSQLSNPTDDSWK	2	GQSQLSNPTDDSWK2	31716.5	28685.7	32878.1
Q9ES02	Q9ES02	MEPE_RAT	Mepe	Matrix extracellular phosphoglycoprotein	1	GQSSHSLGNEVK	GQSSHSLGNEVK	2	GQSSHSLGNEVK2	1963.92	1148.72	
Q9ES02	Q9ES02	MEPE_RAT	Mepe	Matrix extracellular phosphoglycoprotein	1	GQSSHSLGNEVK	GQSSHSLGNEVK	3	GQSSHSLGNEVK3	7856.37		
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	GQTCEPNLMISYQCGLVFR	GQTC(UniMod:4)EPNLMISYQC(UniMod:4)GLVFR	3	GQTC(UniMod:4)EPNLMISYQC(UniMod:4)GLVFR3	32926.5	9205.68	9059.17
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	GQTFYIQIDFNRPYDPR	GQTFYIQIDFNRPYDPR	3	GQTFYIQIDFNRPYDPR3	18290	20250.1	12839
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	GQTGKEHSPPGEVVLR	GQTGKEHSPPGEVVLR	4	GQTGKEHSPPGEVVLR4	8498.66	14853	23308.5
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	GQTLALTQQQR	GQTLALTQQQR	2	GQTLALTQQQR2	98176.2	76230.2	87344.5
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	GQTLVVQFTVK	GQTLVVQFTVK	2	GQTLVVQFTVK2	346517	418904	304781
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	GQTLVVQFTVK	GQTLVVQFTVK	3	GQTLVVQFTVK3		4148.68	
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	GQTNVGQDGR	GQTNVGQDGR	2	GQTNVGQDGR2			9116.88
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	GQTPGGAQFVGLELYK	GQTPGGAQFVGLELYK	2	GQTPGGAQFVGLELYK2	7135.23	12759.1	7832.1
Q6AYF8	Q6AYF8	Q6AYF8_RAT	Serpinb9	Serpin family B member 9	1	GQTQVQISQALGLNK	GQTQVQISQALGLNK	2	GQTQVQISQALGLNK2	10016.7	6995.83	3863.54
Q29RW1	Q29RW1	MYH4_RAT	Myh4	Myosin-4	1	GQTVQQVYNSVGALAK	GQTVQQVYNSVGALAK	2	GQTVQQVYNSVGALAK2	3419.83	3256.21	
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	GQTVTFTCVATGVPTPIINWR	GQTVTFTC(UniMod:4)VATGVPTPIINWR	3	GQTVTFTC(UniMod:4)VATGVPTPIINWR3	39239.6	37395.2	34549.5
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	GQVAELR	GQVAELR	2	GQVAELR2	45620.6	43799.5	36702.5
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	GQVALCK	GQVALC(UniMod:4)K	2	GQVALC(UniMod:4)K2	39355.6	51414	36977.1
D3Z8W5	D3Z8W5	D3Z8W5_RAT	Ube2l3	Ube2l3 protein	1	GQVCLPVISAENWK	GQVC(UniMod:4)LPVISAENWK	2	GQVC(UniMod:4)LPVISAENWK2	6738.84	2423.91	
D3Z8W5	D3Z8W5	D3Z8W5_RAT	Ube2l3	Ube2l3 protein	1	GQVCLPVISAENWKPATK	GQVC(UniMod:4)LPVISAENWKPATK	3	GQVC(UniMod:4)LPVISAENWKPATK3	93298.8	87968.8	101971
Q6AYT3	Q6AYT3;A0A8I5YBA4	RTCB_RAT	Rtcb	RNA-splicing ligase RtcB homolog	0	GQVCVMIHSGSR	GQVC(UniMod:4)VMIHSGSR	3	GQVC(UniMod:4)VMIHSGSR3	2685.13	5042.17	2695.24
Q6AXY8	Q6AXY8	Q6AXY8_RAT	Dhrs1	Dehydrogenase/reductase 1	1	GQVCVVTGASR	GQVC(UniMod:4)VVTGASR	2	GQVC(UniMod:4)VVTGASR2	20004.3	25456.3	23494.2
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	GQVELTGK	GQVELTGK	2	GQVELTGK2		8064.3	9435.39
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	GQVEQANQELR	GQVEQANQELR	2	GQVEQANQELR2	7462.28	7264.54	10458
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	GQVFDVGPR	GQVFDVGPR	2	GQVFDVGPR2	331138	371948	340678
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	GQVFSVLTQLGASAMLVR	GQVFSVLTQLGASAMLVR	2	GQVFSVLTQLGASAMLVR2	12948.6	9949.61	13921.4
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	GQVFSVLTQLGASAMLVR	GQVFSVLTQLGASAMLVR	3	GQVFSVLTQLGASAMLVR3	16641.7	9618.77	12234.6
Q62598	Q62598	DSPP_RAT	Dspp	Dentin sialophosphoprotein	1	GQVGIAENAEEAK	GQVGIAENAEEAK	2	GQVGIAENAEEAK2	1.15776e+06	1.22994e+06	1.10014e+06
Q62598	Q62598	DSPP_RAT	Dspp	Dentin sialophosphoprotein	1	GQVGIAENAEEAKESK	GQVGIAENAEEAKESK	2	GQVGIAENAEEAKESK2	13935.4	17100.7	12330.8
Q62598	Q62598	DSPP_RAT	Dspp	Dentin sialophosphoprotein	1	GQVGIAENAEEAKESK	GQVGIAENAEEAKESK	3	GQVGIAENAEEAKESK3	516583	647729	653161
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	GQVGLVPK	GQVGLVPK	1	GQVGLVPK1	6103.48	2035.49	6110.38
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	GQVGLVPK	GQVGLVPK	2	GQVGLVPK2	217848	203402	186953
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	GQVINLDQLHSSWK	GQVINLDQLHSSWK	2	GQVINLDQLHSSWK2	2442.59		2593.82
Q10473	Q10473	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	1	GQVITFLDAHCECTVGWLEPLLAR	GQVITFLDAHC(UniMod:4)EC(UniMod:4)TVGWLEPLLAR	3	GQVITFLDAHC(UniMod:4)EC(UniMod:4)TVGWLEPLLAR3	27319.1	15788.3	20289.2
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	GQVKPSTSSQPILSAPGPTK	GQVKPSTSSQPILSAPGPTK	3	GQVKPSTSSQPILSAPGPTK3	29398.9	42977.4	43461.6
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	GQVLPAHTLLNTVDVELIYEGIK	GQVLPAHTLLNTVDVELIYEGIK	3	GQVLPAHTLLNTVDVELIYEGIK3	11148.2	11420.3	8503.02
M0RCS2	M0RCS2	M0RCS2_RAT	Tbl2	Transducin (beta)-like 2	1	GQVLSTINTNQMNNSHAVISPCSR	GQVLSTINTNQMNNSHAVISPC(UniMod:4)SR	3	GQVLSTINTNQMNNSHAVISPC(UniMod:4)SR3	6772.12	4025.4	5833.95
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	GQVLSVCVEEENIIPYITNVLQNPDLALR	GQVLSVC(UniMod:4)VEEENIIPYITNVLQNPDLALR	4	GQVLSVC(UniMod:4)VEEENIIPYITNVLQNPDLALR4		3675.35	5855.9
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	GQVPPLVTTNFLVK	GQVPPLVTTNFLVK	2	GQVPPLVTTNFLVK2	59580.3	50766.8	36048
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	GQVQEVGWHDVAGWLGR	GQVQEVGWHDVAGWLGR	2	GQVQEVGWHDVAGWLGR2	3194.98		1863.71
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	GQVQEVGWHDVAGWLGR	GQVQEVGWHDVAGWLGR	3	GQVQEVGWHDVAGWLGR3	44421.8	40835	50538
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	GQVQLDPQTLQDR	GQVQLDPQTLQDR	2	GQVQLDPQTLQDR2	13085.3	4801.59	4139.72
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	GQVQLDPQTLQDRDWQR	GQVQLDPQTLQDRDWQR	3	GQVQLDPQTLQDRDWQR3	38190	18093.7	25559.2
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	GQVQTWQEELK	GQVQTWQEELK	2	GQVQTWQEELK2	2012.21		1872.19
Q8K4V4	Q8K4V4	SNX27_RAT	Snx27	Sorting nexin-27	1	GQVSEGGQLR	GQVSEGGQLR	2	GQVSEGGQLR2	39596.3	42532.2	22703.4
Q5PPL3	Q5PPL3	NSDHL_RAT	Nsdhl	Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating	1	GQVTGTDLINEVSK	GQVTGTDLINEVSK	2	GQVTGTDLINEVSK2	6416.72	3740.86	7623.81
D3ZUM4	D3ZUM4;B1WBS6	D3ZUM4_RAT	Glb1	Beta-galactosidase	0	GQVWINGFNLGR	GQVWINGFNLGR	2	GQVWINGFNLGR2	14014.2	11910	14865.9
P09034	P09034	ASSY_RAT	Ass1	Argininosuccinate synthase	1	GQVYILGR	GQVYILGR	2	GQVYILGR2	9148.52	8161.53	3728.12
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GQWACIPYSQLR	GQWAC(UniMod:4)IPYSQLR	2	GQWAC(UniMod:4)IPYSQLR2	119804	153290	123333
Q2KJ09	Q2KJ09	UBP16_RAT	Usp16	Ubiquitin carboxyl-terminal hydrolase 16	1	GQWFHISDTHVQAVPITK	GQWFHISDTHVQAVPITK	4	GQWFHISDTHVQAVPITK4			4510.75
A0A8I5YCH6	A0A8I5YCH6	A0A8I5YCH6_RAT	Aaas	Aladin WD repeat nucleoporin	1	GQWINLPVLHLTK	GQWINLPVLHLTK	3	GQWINLPVLHLTK3	3641.47		2730.19
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	GQYDVAIK	GQYDVAIK	1	GQYDVAIK1		1998.25	3472.61
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	GQYDVAIK	GQYDVAIK	2	GQYDVAIK2	117266	137174	128290
Q63313	Q63313	LBP_RAT	Lbp	Lipopolysaccharide-binding protein	1	GQYEFHSLEIQSCQLR	GQYEFHSLEIQSC(UniMod:4)QLR	3	GQYEFHSLEIQSC(UniMod:4)QLR3	39139.7	17712.3	31618.9
P12369	P12369;P12368	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	0	GQYFGELALVTNKPR	GQYFGELALVTNKPR	2	GQYFGELALVTNKPR2	98844.4	94326.3	92673.1
P12369	P12369;P12368	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	0	GQYFGELALVTNKPR	GQYFGELALVTNKPR	3	GQYFGELALVTNKPR3	1.38527e+06	1.59848e+06	1.61353e+06
P61621	P61621	S61A1_RAT	Sec61a1	Protein transport protein Sec61 subunit alpha isoform 1	1	GQYNTYPIK	GQYNTYPIK	2	GQYNTYPIK2	54716.1	56677.4	48133
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	GQYQLLLSGR	GQYQLLLSGR	2	GQYQLLLSGR2	44933.9	52663.4	51154.9
P20037	P20037	HA2B_RAT	RT1-Ba	Rano class II histocompatibility antigen, B alpha chain	1	GQYTHEFDGDER	GQYTHEFDGDER	2	GQYTHEFDGDER2	2685.05		
P20037	P20037	HA2B_RAT	RT1-Ba	Rano class II histocompatibility antigen, B alpha chain	1	GQYTHEFDGDER	GQYTHEFDGDER	3	GQYTHEFDGDER3	6062.34	6884.89	16148.6
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	GRAELLISTVGPEECVVPFLTRPK	GRAELLISTVGPEEC(UniMod:4)VVPFLTRPK	4	GRAELLISTVGPEEC(UniMod:4)VVPFLTRPK4	9565.05	8382.04	2024.72
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	GRAPAIGR	GRAPAIGR	2	GRAPAIGR2	2289.3	3596.26	6100.93
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	GRAPLPMAHIEK	GRAPLPMAHIEK	3	GRAPLPMAHIEK3	14183.5	14708.3	8722.62
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	GRCEDGECICDPGYSGDDCGVR	GRC(UniMod:4)EDGEC(UniMod:4)IC(UniMod:4)DPGYSGDDC(UniMod:4)GVR	3	GRC(UniMod:4)EDGEC(UniMod:4)IC(UniMod:4)DPGYSGDDC(UniMod:4)GVR3	4550.75	6036.43	5313.34
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	GRCTQGFMASK	GRC(UniMod:4)TQGFMASK	2	GRC(UniMod:4)TQGFMASK2	3200.66	3597.27	
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	GRCTQGFMASK	GRC(UniMod:4)TQGFMASK	3	GRC(UniMod:4)TQGFMASK3	35694.6	25881.3	56979.2
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	GRCTQGFMASKK	GRC(UniMod:4)TQGFMASKK	3	GRC(UniMod:4)TQGFMASKK3	10596	7735.54	16325.4
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	GRDHGIPPYHDYR	GRDHGIPPYHDYR	4	GRDHGIPPYHDYR4	22645	19970	22051.9
P48004	P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	1	GRDIVVLGVEK	GRDIVVLGVEK	2	GRDIVVLGVEK2	123576	112368	146873
P48004	P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	1	GRDIVVLGVEK	GRDIVVLGVEK	3	GRDIVVLGVEK3	2.33507e+06	2.59686e+06	2.72243e+06
P48004	P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	1	GRDIVVLGVEKK	GRDIVVLGVEKK	3	GRDIVVLGVEKK3	50291.3	85271.8	75701.3
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	GRDLALPTLLNPK	GRDLALPTLLNPK	3	GRDLALPTLLNPK3	5135.93	5759.91	15032
F7FQB8	F7FQB8	F7FQB8_RAT	Kpna4	Karyopherin subunit alpha 4	1	GRDLETMR	GRDLETMR	2	GRDLETMR2		1761.31	
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	GRDQGPNVCALQQILGTK	GRDQGPNVC(UniMod:4)ALQQILGTK	3	GRDQGPNVC(UniMod:4)ALQQILGTK3	4819.71	2918.62	
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GRDTIEVSK	GRDTIEVSK	2	GRDTIEVSK2	20435.9	1044.65	
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	GRDVILK	GRDVILK	2	GRDVILK2	37945.4	37939.8	30840.7
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	GRDVILKK	GRDVILKK	2	GRDVILKK2	14535.9	17217.5	16297.7
P50399	P50398;P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	0	GRDWNVDLIPK	GRDWNVDLIPK	2	GRDWNVDLIPK2	28273.7	31560	24491.1
P50399	P50398;P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	0	GRDWNVDLIPK	GRDWNVDLIPK	3	GRDWNVDLIPK3	55834.3	41590.6	34515.8
Q5PQL3	Q5PQL3	SPP2B_RAT	Sppl2b	Signal peptide peptidase-like 2B	1	GRDYCILYNPQWAHLPHDLNK	GRDYC(UniMod:4)ILYNPQWAHLPHDLNK	4	GRDYC(UniMod:4)ILYNPQWAHLPHDLNK4	1376.32	2135.12	
Q99MC0	Q99MC0	PP14A_RAT	Ppp1r14a	Protein phosphatase 1 regulatory subunit 14A	1	GREADMPDEVNIDELLELDSEEER	GREADMPDEVNIDELLELDSEEER	3	GREADMPDEVNIDELLELDSEEER3	5259.06		4475.42
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	GREAPENSPWVSR	GREAPENSPWVSR	3	GREAPENSPWVSR3	93581	121044	141771
Q64350	Q64350	EI2BE_RAT	Eif2b5	Translation initiation factor eIF-2B subunit epsilon	1	GREENISCDNLVLEINSLK	GREENISC(UniMod:4)DNLVLEINSLK	3	GREENISC(UniMod:4)DNLVLEINSLK3	3311.01		3390.67
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	GREEWESAALQNANTK	GREEWESAALQNANTK	3	GREEWESAALQNANTK3	23723.4	20904.8	20175
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	GRELPTAFDYVEFTR	GRELPTAFDYVEFTR	3	GRELPTAFDYVEFTR3	78123.1	132637	112656
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	GREPASCEGLCGGGVGAHGDADR	GREPASC(UniMod:4)EGLC(UniMod:4)GGGVGAHGDADR	3	GREPASC(UniMod:4)EGLC(UniMod:4)GGGVGAHGDADR3	1277.48	1187.53	
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	GREPASCEGLCGGGVGAHGDADR	GREPASC(UniMod:4)EGLC(UniMod:4)GGGVGAHGDADR	4	GREPASC(UniMod:4)EGLC(UniMod:4)GGGVGAHGDADR4	48618.9	40293.6	46314.3
A0A8I6B124	A0A8I6B124	A0A8I6B124_RAT	Zswim8	Zinc finger, SWIM-type containing 8	1	GREPEGVWNLLSIVR	GREPEGVWNLLSIVR	3	GREPEGVWNLLSIVR3	4520.01	11980.5	9593.72
G3V9T7	G3V9T7	GET3_RAT	Get3	ATPase Get3	1	GRESVLIISTDPAHNISDAFDQK	GRESVLIISTDPAHNISDAFDQK	4	GRESVLIISTDPAHNISDAFDQK4	67010.7	72141	84025.2
P09650	P09650	MCPT1_RAT	Mcpt1	Mast cell protease 1	1	GRETTVTLGVHDVSK	GRETTVTLGVHDVSK	3	GRETTVTLGVHDVSK3			6798.99
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	GRFCEIGPDDCYVGDGYSYR	GRFC(UniMod:4)EIGPDDC(UniMod:4)YVGDGYSYR	3	GRFC(UniMod:4)EIGPDDC(UniMod:4)YVGDGYSYR3	13685.1	19707.6	20312.4
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	GRFQDNLDFIQWFK	GRFQDNLDFIQWFK	3	GRFQDNLDFIQWFK3	8980.19	7137.3	12470.2
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	GRGDIQPQLDSALQDVNDK	GRGDIQPQLDSALQDVNDK	3	GRGDIQPQLDSALQDVNDK3	6136.5	9117.17	8385.71
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	GRHDVLFQITQFPTR	GRHDVLFQITQFPTR	3	GRHDVLFQITQFPTR3	60225.5	89999.2	71575.4
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	GRHDVLFQITQFPTR	GRHDVLFQITQFPTR	4	GRHDVLFQITQFPTR4	60833.7	80001.9	80159.2
P18422	P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	1	GRHEIVPK	GRHEIVPK	2	GRHEIVPK2			75365.4
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	GRIEPDDSQTWDEEER	GRIEPDDSQTWDEEER	3	GRIEPDDSQTWDEEER3	5662.97	32043.6	19761.3
A0A8I5ZTB8	A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	GRIPVLSWIHPESQATVTR	GRIPVLSWIHPESQATVTR	4	GRIPVLSWIHPESQATVTR4	9662.73	3617.5	8879.5
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GRISCTIANR	GRISC(UniMod:4)TIANR	3	GRISC(UniMod:4)TIANR3	37417.2	45586	58611.8
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GRISCTIANRCHEGGQSYK	GRISC(UniMod:4)TIANRC(UniMod:4)HEGGQSYK	4	GRISC(UniMod:4)TIANRC(UniMod:4)HEGGQSYK4	6935.01	8550.69	5628.41
A0A1W2Q642	A0A1W2Q642	A0A1W2Q642_RAT	Pi16	Peptidase inhibitor 16	1	GRKPYQEGTPCSQCPLGYSCVNSLCEPER	GRKPYQEGTPC(UniMod:4)SQC(UniMod:4)PLGYSC(UniMod:4)VNSLC(UniMod:4)EPER	4	GRKPYQEGTPC(UniMod:4)SQC(UniMod:4)PLGYSC(UniMod:4)VNSLC(UniMod:4)EPER4	294551	343856	287077
P70531	P70531	EF2K_RAT	Eef2k	Eukaryotic elongation factor 2 kinase	1	GRLANQYYEK	GRLANQYYEK	2	GRLANQYYEK2	32370.3	46196	22661.1
A0A8I6A282	A0A8I6A282	A0A8I6A282_RAT	Antxr2	Anthrax toxin receptor	1	GRLDALWALILK	GRLDALWALILK	3	GRLDALWALILK3	10245.3	8605.51	8018.41
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	GRLDDIR	GRLDDIR	2	GRLDDIR2	26629.6	30683.1	28248
Q9QY17	Q9QY17	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	1	GRLDSGQVGLYPANYVEAIQ	GRLDSGQVGLYPANYVEAIQ	3	GRLDSGQVGLYPANYVEAIQ3	19676.1	7661.87	9828.35
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	GRLDSMNVSLNQEDLNLLFR	GRLDSMNVSLNQEDLNLLFR	3	GRLDSMNVSLNQEDLNLLFR3	3939.34	7504.28	2016.76
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	GRLEDASILCLDK	GRLEDASILC(UniMod:4)LDK	3	GRLEDASILC(UniMod:4)LDK3	2381.72	2702.81	
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	GRLEEAYEK	GRLEEAYEK	2	GRLEEAYEK2	2046.26	2857.54	1702.73
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	GRLEEVGNQAR	GRLEEVGNQAR	2	GRLEEVGNQAR2	2.89214e+06	3.5784e+06	2.65983e+06
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	GRLEEVGNQAR	GRLEEVGNQAR	3	GRLEEVGNQAR3	186474	279499	283747
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	GRLEVHLSSGTR	GRLEVHLSSGTR	3	GRLEVHLSSGTR3	34043	35557.6	32765
Q9JJM7	Q9JJM7	GP1BB_RAT	Gp1bb	Platelet glycoprotein Ib beta chain	1	GRLLPYVAEDELR	GRLLPYVAEDELR	3	GRLLPYVAEDELR3	25383.7	28387.3	30957.8
Q5XI78	Q5XI78;D3ZQD3	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	0	GRLNVLANVIR	GRLNVLANVIR	3	GRLNVLANVIR3	2198.97	7731.16	3637.13
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	GRLPLLLVANAGTAAVGHTDK	GRLPLLLVANAGTAAVGHTDK	3	GRLPLLLVANAGTAAVGHTDK3	9349.7	4247.61	10704.7
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	GRLPLLLVANAGTAAVGHTDK	GRLPLLLVANAGTAAVGHTDK	4	GRLPLLLVANAGTAAVGHTDK4	16814.4	22394.9	28709.3
P18292	P18292	THRB_RAT	F2	Prothrombin	1	GRLYQGNLAVTTLGSPCLAWDSLPTK	GRLYQGNLAVTTLGSPC(UniMod:4)LAWDSLPTK	3	GRLYQGNLAVTTLGSPC(UniMod:4)LAWDSLPTK3	70611.4	84728.9	76255.3
P18292	P18292	THRB_RAT	F2	Prothrombin	1	GRLYQGNLAVTTLGSPCLAWDSLPTK	GRLYQGNLAVTTLGSPC(UniMod:4)LAWDSLPTK	4	GRLYQGNLAVTTLGSPC(UniMod:4)LAWDSLPTK4	9302.95	9664.41	11077
P18292	P18292	THRB_RAT	F2	Prothrombin	1	GRLYQGNLAVTTLGSPCLAWDSLPTKTLSK	GRLYQGNLAVTTLGSPC(UniMod:4)LAWDSLPTKTLSK	4	GRLYQGNLAVTTLGSPC(UniMod:4)LAWDSLPTKTLSK4	58263.7	88592.2	95534.9
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	GRPDVAAFDFTSMMR	GRPDVAAFDFTSMMR	3	GRPDVAAFDFTSMMR3	9900.6	13389.2	10307.9
M0R8J3	M0R8J3	M0R8J3_RAT	Jmy	Junction mediating and regulatory protein, p53 cofactor	1	GRPEAAASSTALR	GRPEAAASSTALR	3	GRPEAAASSTALR3	4558.97	2506.49	7036.72
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	GRPFDYNGPR	GRPFDYNGPR	2	GRPFDYNGPR2	39784.5	32440.8	36901.6
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	GRPFDYNGPR	GRPFDYNGPR	3	GRPFDYNGPR3	783122	835860	812680
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	GRPITMFIPSDVDNYDDIR	GRPITMFIPSDVDNYDDIR	3	GRPITMFIPSDVDNYDDIR3	31654.4	26642	44224.7
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	GRPITMYIPSGIR	GRPITMYIPSGIR	3	GRPITMYIPSGIR3	33391.7	27052.7	41283.9
Q8K4K5	Q8K4K5	L2GL1_RAT	Llgl1	Lethal(2) giant larvae protein homolog 1	1	GRPLPEPYEASR	GRPLPEPYEASR	3	GRPLPEPYEASR3	2657.96		3161.15
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	GRPLPQDLLHQAK	GRPLPQDLLHQAK	3	GRPLPQDLLHQAK3	15366.9	16913.6	13664.1
B1WC26	B1WC26	B1WC26_RAT	Nans	N-acetylneuraminate synthase	1	GRPMVISSGMQSMDTMK	GRPMVISSGMQSMDTMK	3	GRPMVISSGMQSMDTMK3	3853.29	4166.95	5952.01
A0A0G2K069	A0A0G2K069	A0A0G2K069_RAT	Col11a2	Collagen type XI alpha 2 chain	1	GRPQASAQPIFR	GRPQASAQPIFR	3	GRPQASAQPIFR3	20663.1	31611.6	22311.5
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	GRPTSTNPIASIFAWTR	GRPTSTNPIASIFAWTR	3	GRPTSTNPIASIFAWTR3	199773	194894	230841
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	GRPVPMLIPDELAPTYSLDTR	GRPVPMLIPDELAPTYSLDTR	3	GRPVPMLIPDELAPTYSLDTR3	80067.8	90703.8	80473.2
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	GRPVSFVDAFPLSVWICQPTR	GRPVSFVDAFPLSVWIC(UniMod:4)QPTR	3	GRPVSFVDAFPLSVWIC(UniMod:4)QPTR3	21676.7	32691.7	21370.2
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	GRPVTMYMPK	GRPVTMYMPK	2	GRPVTMYMPK2	16800.7	17842.8	17091.9
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	GRPVTMYMPK	GRPVTMYMPK	3	GRPVTMYMPK3	160974	167168	168980
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	GRQASILQYLR	GRQASILQYLR	3	GRQASILQYLR3	10538.7	18315.7	18268.3
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	GRQDGSESEAATLAMVGR	GRQDGSESEAATLAMVGR	2	GRQDGSESEAATLAMVGR2	10008.8	7631	5749.02
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	GRQDGSESEAATLAMVGR	GRQDGSESEAATLAMVGR	3	GRQDGSESEAATLAMVGR3	150869	205488	196016
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	GRQDLEIQGPR	GRQDLEIQGPR	3	GRQDLEIQGPR3	71471.2	82560	54615
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	GRQEHYEEEEDEEDGAAVAEK	GRQEHYEEEEDEEDGAAVAEK	4	GRQEHYEEEEDEEDGAAVAEK4	3651.35	6603.15	9973.94
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	GRQHGPNVCAVQK	GRQHGPNVC(UniMod:4)AVQK	2	GRQHGPNVC(UniMod:4)AVQK2			2462.14
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	GRQHGPNVCAVQK	GRQHGPNVC(UniMod:4)AVQK	3	GRQHGPNVC(UniMod:4)AVQK3			4421.15
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	GRQNISPDKIPWSALK	GRQNISPDKIPWSALK	3	GRQNISPDKIPWSALK3		8897.04	
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	GRQNISPDKIPWSALK	GRQNISPDKIPWSALK	4	GRQNISPDKIPWSALK4	13777	26019.4	14926.2
Q6MG59	Q6MG59	G6B_RAT	Mpig6b	Megakaryocyte and platelet inhibitory receptor G6b	1	GRRPILWASSSGTPTVLQHFSGR	GRRPILWASSSGTPTVLQHFSGR	3	GRRPILWASSSGTPTVLQHFSGR3	5539.07	1584.42	2816.76
Q6MG59	Q6MG59	G6B_RAT	Mpig6b	Megakaryocyte and platelet inhibitory receptor G6b	1	GRRPILWASSSGTPTVLQHFSGR	GRRPILWASSSGTPTVLQHFSGR	4	GRRPILWASSSGTPTVLQHFSGR4	155837	180632	160636
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	GRSCDSLNNR	GRSC(UniMod:4)DSLNNR	3	GRSC(UniMod:4)DSLNNR3			2156.13
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	GRSCDSLNNRCEGSSVQTR	GRSC(UniMod:4)DSLNNRC(UniMod:4)EGSSVQTR	3	GRSC(UniMod:4)DSLNNRC(UniMod:4)EGSSVQTR3	4733.97	3262.3	
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	GRSCDSLNNRCEGSSVQTR	GRSC(UniMod:4)DSLNNRC(UniMod:4)EGSSVQTR	4	GRSC(UniMod:4)DSLNNRC(UniMod:4)EGSSVQTR4	9427.03	18961.9	18034.9
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	GRSPDELPATGGDGGK	GRSPDELPATGGDGGK	3	GRSPDELPATGGDGGK3	27581.5	27928.3	27506.8
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	GRTDHDIALVR	GRTDHDIALVR	2	GRTDHDIALVR2	28409.3	16091	21605.8
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	GRTDHDIALVR	GRTDHDIALVR	3	GRTDHDIALVR3	1.83311e+06	2.263e+06	2.12977e+06
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	GRTPLHLSIMAR	GRTPLHLSIMAR	3	GRTPLHLSIMAR3		6209.69	
O70595	O70595	ABCB6_RAT	Abcb6	ATP-binding cassette sub-family B member 6	1	GRVEFENVHFSYADGR	GRVEFENVHFSYADGR	4	GRVEFENVHFSYADGR4	8593.77	15638.6	12516.5
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	GRVEIFYQGSWGTVCDDSWDINDANVVCR	GRVEIFYQGSWGTVC(UniMod:4)DDSWDINDANVVC(UniMod:4)R	4	GRVEIFYQGSWGTVC(UniMod:4)DDSWDINDANVVC(UniMod:4)R4	41535.5	43912.6	37859.7
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	GRVEILYQGSWGTVCDDSWDIHDANVVCR	GRVEILYQGSWGTVC(UniMod:4)DDSWDIHDANVVC(UniMod:4)R	4	GRVEILYQGSWGTVC(UniMod:4)DDSWDIHDANVVC(UniMod:4)R4	1.25547e+06	1.2129e+06	1.14284e+06
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	GRVEILYQGSWGTVCDDSWDINDAK	GRVEILYQGSWGTVC(UniMod:4)DDSWDINDAK	3	GRVEILYQGSWGTVC(UniMod:4)DDSWDINDAK3	284962	230196	286053
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	GRVEILYQGSWGTVCDDSWDINDAK	GRVEILYQGSWGTVC(UniMod:4)DDSWDINDAK	4	GRVEILYQGSWGTVC(UniMod:4)DDSWDINDAK4	6101.26	14528.4	6398.29
Q8CIZ5	F1LVL9;Q8CIZ5	DMBT1_RAT	Dmbt1	Deleted in malignant brain tumors 1 protein	0	GRVEILYQGSWGTVCDDSWDINDANVVCR	GRVEILYQGSWGTVC(UniMod:4)DDSWDINDANVVC(UniMod:4)R	4	GRVEILYQGSWGTVC(UniMod:4)DDSWDINDANVVC(UniMod:4)R4	304372	390414	303600
A0A8I5Y1D5	A0A8I5Y1D5	A0A8I5Y1D5_RAT	Mtmr1	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	GRVPVLSWIHPESQATITR	GRVPVLSWIHPESQATITR	4	GRVPVLSWIHPESQATITR4	2044.37	2495.19	3830.01
Q62844	Q62844;Q6P6U0	FYN_RAT	Fyn	Tyrosine-protein kinase Fyn	0	GRVPYPGMNNR	GRVPYPGMNNR	3	GRVPYPGMNNR3	63145.5	85474.5	88378.1
Q9WUD9	Q9WUD9;F1LM93	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	0	GRVPYPGMVNR	GRVPYPGMVNR	3	GRVPYPGMVNR3	209510	184022	196860
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	GRVTGEEWLVR	GRVTGEEWLVR	3	GRVTGEEWLVR3			3794.27
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	GRWESFVEETLMETNRR	GRWESFVEETLMETNRR	4	GRWESFVEETLMETNRR4	11091.1	13276.9	14673.6
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	GRWESQQDVSQTLVSR	GRWESQQDVSQTLVSR	3	GRWESQQDVSQTLVSR3	6363.56	7092.27	4194.94
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	GRWQGNDIVVK	GRWQGNDIVVK	3	GRWQGNDIVVK3	3994.5	10160.3	8874.35
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	GRYEAEVQALTEK	GRYEAEVQALTEK	3	GRYEAEVQALTEK3	20899.8	28100.3	21520.1
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	GRYLTVACIFR	GRYLTVAC(UniMod:4)IFR	3	GRYLTVAC(UniMod:4)IFR3	82346.2	62171.4	72880.4
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	GRYLYVLEFSDYPGTHEPLEPEVK	GRYLYVLEFSDYPGTHEPLEPEVK	3	GRYLYVLEFSDYPGTHEPLEPEVK3	5848.38	2975.26	3958.68
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	GRYLYVLEFSDYPGTHEPLEPEVK	GRYLYVLEFSDYPGTHEPLEPEVK	4	GRYLYVLEFSDYPGTHEPLEPEVK4		6481.14	
B0BN19	B0BN19	B0BN19_RAT	Rab22a	RAB22A, member RAS oncogene family	1	GSAAAIIVYDITK	GSAAAIIVYDITK	2	GSAAAIIVYDITK2	6629.89	6207.81	8553.58
B0BN19	B0BN19	B0BN19_RAT	Rab22a	RAB22A, member RAS oncogene family	1	GSAAAIIVYDITKEETFSTLK	GSAAAIIVYDITKEETFSTLK	3	GSAAAIIVYDITKEETFSTLK3	11915.9	2014.43	17792.4
Q6GQP4	Q6GQP4	RAB31_RAT	Rab31	Ras-related protein Rab-31	1	GSAAAVIVYDITK	GSAAAVIVYDITK	2	GSAAAVIVYDITK2	29842.7	26037.3	28086.8
Q6GQP4	Q6GQP4	RAB31_RAT	Rab31	Ras-related protein Rab-31	1	GSAAAVIVYDITK	GSAAAVIVYDITK	3	GSAAAVIVYDITK3	10249.2	10966.1	12657.8
Q3KRD5	Q3KRD5	TOM34_RAT	Tomm34	Mitochondrial import receptor subunit TOM34	1	GSADPEEESVLYSNR	GSADPEEESVLYSNR	2	GSADPEEESVLYSNR2	3104.63		2348.05
D3ZKE1	D3ZKE1	D3ZKE1_RAT	Uvrag	UV radiation resistance associated	1	GSAFAAEHAK	GSAFAAEHAK	2	GSAFAAEHAK2	10810.5	7398.09	10330.8
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	GSAFAIGSDGLCCQSR	GSAFAIGSDGLC(UniMod:4)C(UniMod:4)QSR	2	GSAFAIGSDGLC(UniMod:4)C(UniMod:4)QSR2	19344.6	22736	21775.1
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	GSAFEPAR	GSAFEPAR	2	GSAFEPAR2	11106.1	16560.7	14386.8
P20650	P20650	PPM1A_RAT	Ppm1a	Protein phosphatase 1A	1	GSAGAPSVENVK	GSAGAPSVENVK	2	GSAGAPSVENVK2	44673	39280.3	23441.4
A0A8I6AHD0	A0A8I6AHD0	A0A8I6AHD0_RAT	Bri3bp	Bri3 binding protein	1	GSAGGLCSPSVEEK	GSAGGLC(UniMod:4)SPSVEEK	2	GSAGGLC(UniMod:4)SPSVEEK2	33383.5	26223.6	22145
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	GSAGSLELISEALCSTK	GSAGSLELISEALC(UniMod:4)STK	2	GSAGSLELISEALC(UniMod:4)STK2		10123.8	9510.93
Q07647	Q07647	GTR3_RAT	Slc2a3	Solute carrier family 2, facilitated glucose transporter member 3	1	GSAGVELNSMQPVK	GSAGVELNSMQPVK	2	GSAGVELNSMQPVK2	1.57055e+06	1.6836e+06	1.6811e+06
Q07647	Q07647	GTR3_RAT	Slc2a3	Solute carrier family 2, facilitated glucose transporter member 3	1	GSAGVELNSMQPVK	GSAGVELNSMQPVK	3	GSAGVELNSMQPVK3	15353.8	13157.8	12290.1
Q07647	Q07647	GTR3_RAT	Slc2a3	Solute carrier family 2, facilitated glucose transporter member 3	1	GSAGVELNSMQPVKETPGNA	GSAGVELNSMQPVKETPGNA	3	GSAGVELNSMQPVKETPGNA3	40783.8	53507	63658.3
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	GSAISSVVFEYPFSIQSISPR	GSAISSVVFEYPFSIQSISPR	3	GSAISSVVFEYPFSIQSISPR3	17455.9	22427.8	21829.4
P62832	P62832	RL23_RAT	Rpl23	Large ribosomal subunit protein uL14	1	GSAITGPVAK	GSAITGPVAK	2	GSAITGPVAK2	52175.2	36957.3	32618.1
A0A8I5ZXB9	A0A8I5ZXB9	A0A8I5ZXB9_RAT	Kifap3	Kinesin-associated protein 3	1	GSALILQLAR	GSALILQLAR	2	GSALILQLAR2	43664.7	41069.1	34632.7
D3ZES7	D3ZPX4;A0A8I6AGW9;D3ZWP6;D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	0	GSALPLAIK	GSALPLAIK	2	GSALPLAIK2	127774	173540	147108
A0A8I6AC50	A0A8I6AC50	A0A8I6AC50_RAT	Ttc13	Tetratricopeptide repeat domain 13	1	GSAPCDSLLSLNTEK	GSAPC(UniMod:4)DSLLSLNTEK	2	GSAPC(UniMod:4)DSLLSLNTEK2			4221.3
F1LVL6	F1LVL6	F1LVL6_RAT	Crtc3	CREB regulated transcription coactivator 3	1	GSAPELQPSLHHADNVR	GSAPELQPSLHHADNVR	4	GSAPELQPSLHHADNVR4	12712.2		10831.2
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	GSAPSDMLDSLTTIPELK	GSAPSDMLDSLTTIPELK	2	GSAPSDMLDSLTTIPELK2	851082	843639	890381
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	GSAPSDMLDSLTTIPELK	GSAPSDMLDSLTTIPELK	3	GSAPSDMLDSLTTIPELK3	207691	202654	258030
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	GSAPSDMLDSLTTIPELKDHLR	GSAPSDMLDSLTTIPELKDHLR	3	GSAPSDMLDSLTTIPELKDHLR3	26023.1	28106	29569.5
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	GSAPSDMLDSLTTIPELKDHLR	GSAPSDMLDSLTTIPELKDHLR	4	GSAPSDMLDSLTTIPELKDHLR4	228757	245372	318620
Q9WTN5	Q9WTN5	TPC1_RAT	Tpcn1	Two pore calcium channel protein 1	1	GSAPSPAAQQTPGSR	GSAPSPAAQQTPGSR	2	GSAPSPAAQQTPGSR2	31112.8	25845	25498.6
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	GSASVFVPYVTEVYK	GSASVFVPYVTEVYK	2	GSASVFVPYVTEVYK2	51038.5	62393.6	53573.5
D3ZW38	D3ZW38	D3ZW38_RAT	Exosc6	Exosome component 6	1	GSAYLEAGGTK	GSAYLEAGGTK	2	GSAYLEAGGTK2	9142.95	9646.35	10272.4
Q9WUK5	Q9WUK5	INHBC_RAT	Inhbc	Inhibin beta C chain	1	GSCCVPTSR	GSC(UniMod:4)C(UniMod:4)VPTSR	2	GSC(UniMod:4)C(UniMod:4)VPTSR2	15193.1	15543	15069.6
F1LWZ3	F1LWZ3	F1LWZ3_RAT	Rhbdf2	Inactive rhomboid protein	1	GSCEITTR	GSC(UniMod:4)EITTR	2	GSC(UniMod:4)EITTR2		8770.63	9049.76
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	GSCGWPSGLCSR	GSC(UniMod:4)GWPSGLC(UniMod:4)SR	2	GSC(UniMod:4)GWPSGLC(UniMod:4)SR2	2.45413e+06	2.57603e+06	2.84481e+06
P84850	P84850	D2HDH_RAT	D2hgdh	D-2-hydroxyglutarate dehydrogenase, mitochondrial	1	GSCHIGGNVATNAGGLR	GSC(UniMod:4)HIGGNVATNAGGLR	3	GSC(UniMod:4)HIGGNVATNAGGLR3	11119.5	8901.35	12645.9
A0A0G2QC40	A0A8I6B298;A0A0G2QC40	A0A0G2QC40_RAT	Mkrn1	RING-type E3 ubiquitin transferase	0	GSCPFGGNCFYK	GSC(UniMod:4)PFGGNC(UniMod:4)FYK	2	GSC(UniMod:4)PFGGNC(UniMod:4)FYK2	35552.1	49695.5	37040.3
B2GUY2	B2GUY2	TFR2_RAT	Tfr2	Transferrin receptor protein 2	1	GSCQACGDSVLVVGEDVNSEDSSR	GSC(UniMod:4)QAC(UniMod:4)GDSVLVVGEDVNSEDSSR	3	GSC(UniMod:4)QAC(UniMod:4)GDSVLVVGEDVNSEDSSR3	2190.62		
Q6Q3E8	Q6Q3E8	Q6Q3E8_RAT	Eng	Endoglin	1	GSCVSLLSPSPEGDPR	GSC(UniMod:4)VSLLSPSPEGDPR	2	GSC(UniMod:4)VSLLSPSPEGDPR2			7512.04
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	GSCYPATGDLLVGR	GSC(UniMod:4)YPATGDLLVGR	2	GSC(UniMod:4)YPATGDLLVGR2	15768.5	9777.11	22603.2
A0A0G2KAF4	A0A0G2KAF4	A0A0G2KAF4_RAT	Nfxl1	Nuclear transcription factor, X-box binding-like 1	1	GSCYPCPETVDVK	GSC(UniMod:4)YPC(UniMod:4)PETVDVK	2	GSC(UniMod:4)YPC(UniMod:4)PETVDVK2	2429.29	2308.09	7025.5
Q9JLH7	Q9JLH7	CK5P3_RAT	Cdk5rap3	CDK5 regulatory subunit-associated protein 3	1	GSDALTLLEYPETR	GSDALTLLEYPETR	2	GSDALTLLEYPETR2	32696.3	30939	34740.6
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	GSDAPWSPVPCR	GSDAPWSPVPC(UniMod:4)R	2	GSDAPWSPVPC(UniMod:4)R2	58626.5	62307.3	57554.2
Q5BJN5	Q5BJN5	MIA40_RAT	Chchd4	Mitochondrial intermembrane space import and assembly protein 40	1	GSDCIDQFR	GSDC(UniMod:4)IDQFR	2	GSDC(UniMod:4)IDQFR2	4588.31	3722.4	
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	GSDEVTASSAATGTSPR	GSDEVTASSAATGTSPR	2	GSDEVTASSAATGTSPR2	5740.53	1875.75	3927.96
P61980	A0A8I5ZZG4;P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	GSDFDCELR	GSDFDC(UniMod:4)ELR	2	GSDFDC(UniMod:4)ELR2	123709	114597	122040
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	GSDGAASSYQLK	GSDGAASSYQLK	2	GSDGAASSYQLK2	92563.3	107042	123415
B1WC26	B1WC26	B1WC26_RAT	Nans	N-acetylneuraminate synthase	1	GSDHLASLEPGELAELVR	GSDHLASLEPGELAELVR	3	GSDHLASLEPGELAELVR3	7959.67	13573	14738.8
D3ZE04	D3ZE04	D3ZE04_RAT	Col7a1	Collagen type VII alpha 1 chain	1	GSDLCSLPLDEGSCTAYTLR	GSDLC(UniMod:4)SLPLDEGSC(UniMod:4)TAYTLR	3	GSDLC(UniMod:4)SLPLDEGSC(UniMod:4)TAYTLR3	970.037		1624.33
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	GSDLFSPK	GSDLFSPK	2	GSDLFSPK2	38947.1	43034	35199.5
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	GSDPFASDCFFK	GSDPFASDC(UniMod:4)FFK	2	GSDPFASDC(UniMod:4)FFK2	117477	110620	119660
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	GSDPSTHQRPPSEMADFLSDAIPGLK	GSDPSTHQRPPSEMADFLSDAIPGLK	4	GSDPSTHQRPPSEMADFLSDAIPGLK4	62226.9	100511	93572.3
Q923V8	Q923V8	SEP15_RAT	Selenof	Selenoprotein F	1	GSDPVLK	GSDPVLK	1	GSDPVLK1	11995.6	12102.1	19594.5
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	GSDSEQLKPAK	GSDSEQLKPAK	2	GSDSEQLKPAK2			1312.35
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	GSDSEQLKPAK	GSDSEQLKPAK	3	GSDSEQLKPAK3	23508.1		35290.9
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	GSDSIAYDK	GSDSIAYDK	1	GSDSIAYDK1	2718.47	1007.02	2121.74
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	GSDSIAYDK	GSDSIAYDK	2	GSDSIAYDK2	92808.3	100704	93094
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	GSDSIAYDKGEK	GSDSIAYDKGEK	2	GSDSIAYDKGEK2	12833.1	17219.1	15783.3
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	GSDSIAYDKGEK	GSDSIAYDKGEK	3	GSDSIAYDKGEK3	130519	88371.8	91192.3
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	GSDSSYVR	GSDSSYVR	2	GSDSSYVR2		51690.5	
D4A5U3	D4A5U3	TGM3_RAT	Tgm3	Protein-glutamine gamma-glutamyltransferase E	1	GSDSVWNFHVWNEGWFVR	GSDSVWNFHVWNEGWFVR	3	GSDSVWNFHVWNEGWFVR3	4966.09		
Q4QQV2	Q4QQV2	DOK1_RAT	Dok1	Docking protein 1	1	GSDTALYSQVQK	GSDTALYSQVQK	2	GSDTALYSQVQK2	61255.8	58500.6	54365.5
Q6AYD4	Q6AYD4	ESAM_RAT	Esam	Endothelial cell-selective adhesion molecule	1	GSDTISK	GSDTISK	1	GSDTISK1			2407.76
Q9WVB1	A0A0G2JT78;Q9WVB1	RAB6A_RAT	Rab6a	Ras-related protein Rab-6A	0	GSDVIIMLVGNK	GSDVIIMLVGNK	2	GSDVIIMLVGNK2	827219	783173	809356
Q9WVB1	A0A0G2JT78;Q9WVB1	RAB6A_RAT	Rab6a	Ras-related protein Rab-6A	0	GSDVIIMLVGNK	GSDVIIMLVGNK	3	GSDVIIMLVGNK3	32268.7	29891	28455.6
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	GSEAPVEYYIVSVR	GSEAPVEYYIVSVR	2	GSEAPVEYYIVSVR2	14102.2	7182.53	12312.4
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	GSECASPLPGLR	GSEC(UniMod:4)ASPLPGLR	2	GSEC(UniMod:4)ASPLPGLR2	100263	141550	96613
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	GSECEFAQYTTHHILR	GSEC(UniMod:4)EFAQYTTHHILR	3	GSEC(UniMod:4)EFAQYTTHHILR3	1138.07	5008.68	5455.4
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	GSECEFAQYTTHHILR	GSEC(UniMod:4)EFAQYTTHHILR	4	GSEC(UniMod:4)EFAQYTTHHILR4	4703.92	9204.6	5238.26
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	GSECFPETGSLWHVPLTFITSK	GSEC(UniMod:4)FPETGSLWHVPLTFITSK	3	GSEC(UniMod:4)FPETGSLWHVPLTFITSK3	28612.8	36354.1	39497.5
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	GSEDFLVIHAR	GSEDFLVIHAR	3	GSEDFLVIHAR3	19672.7	14143.7	17252.7
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	GSEDIQER	GSEDIQER	2	GSEDIQER2	45025.5		49241.1
P61131	P61131	SIA4C_RAT	St3gal4	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4	1	GSEDLLLR	GSEDLLLR	2	GSEDLLLR2	6669.83	8072.34	4574.55
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	GSEDQELQELHLER	GSEDQELQELHLER	2	GSEDQELQELHLER2	7264.21	4523.58	1340.44
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	GSEDQELQELHLER	GSEDQELQELHLER	3	GSEDQELQELHLER3	22608.5	21959.9	30122.3
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	GSEENLDETR	GSEENLDETR	2	GSEENLDETR2	110723	123044	112083
Q62656	Q62656	PTPRZ_RAT	Ptprz1	Receptor-type tyrosine-protein phosphatase zeta	1	GSEFSGK	GSEFSGK	1	GSEFSGK1	3499	6026.86	3035.68
D3ZUV3	D3ZUV3	D3ZUV3_RAT	Eif2a	Eukaryotic translation initiation factor 2A	1	GSEGLYMVNGPPHFTESTVLPR	GSEGLYMVNGPPHFTESTVLPR	3	GSEGLYMVNGPPHFTESTVLPR3	3566.04	10957	11612.8
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	GSEGQLGICPHR	GSEGQLGIC(UniMod:4)PHR	2	GSEGQLGIC(UniMod:4)PHR2	3050.96	1182.57	1566.68
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	GSEGQLGICPHR	GSEGQLGIC(UniMod:4)PHR	3	GSEGQLGIC(UniMod:4)PHR3	23727.1	25888.2	33286.7
Q9EQH1	Q9EQH1	GAB2_RAT	Gab2	GRB2-associated-binding protein 2	1	GSEIQPPPVNR	GSEIQPPPVNR	2	GSEIQPPPVNR2	21113.1	19840	16588.2
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	GSEKPLEQTFAK	GSEKPLEQTFAK	2	GSEKPLEQTFAK2	88888.2	52246.5	61335.4
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	GSEKPLEQTFAK	GSEKPLEQTFAK	3	GSEKPLEQTFAK3	219477	223234	225852
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	GSELGGAAGQGGHPPGYTSLASR	GSELGGAAGQGGHPPGYTSLASR	3	GSELGGAAGQGGHPPGYTSLASR3	94986.8	92779.1	87763.6
A0A8I6GEV9	A0A8I6GEV9	A0A8I6GEV9_RAT	Abce1	ATP binding cassette subfamily E member 1	1	GSELQNYFTK	GSELQNYFTK	2	GSELQNYFTK2	22768.1	11415.2	10185.7
Q62818	Q62818	EI2BB_RAT	Eif2b2	Translation initiation factor eIF-2B subunit beta	1	GSELSER	GSELSER	2	GSELSER2	24239.4	35914.2	32925.6
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	GSEMVVAGK	GSEMVVAGK	1	GSEMVVAGK1	85700.8	74478.9	62692.5
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	GSEMVVAGK	GSEMVVAGK	2	GSEMVVAGK2	2.61452e+06	2.8157e+06	2.61324e+06
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	GSENVEWNDK	GSENVEWNDK	2	GSENVEWNDK2	11079.9	6051.27	8409.83
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	GSEPFVTGVR	GSEPFVTGVR	2	GSEPFVTGVR2	46879.6	37974	57587.4
D4A249	D4A249	D4A249_RAT	Mblac2	Metallo-beta-lactamase domain containing 2	1	GSEQDVVIDTGLGLR	GSEQDVVIDTGLGLR	2	GSEQDVVIDTGLGLR2	4559.71		7585.5
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	GSEQELGEADDPTR	GSEQELGEADDPTR	2	GSEQELGEADDPTR2	31873.3	26838.3	24158.6
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	GSEQELGEADDPTRLEAEER	GSEQELGEADDPTRLEAEER	3	GSEQELGEADDPTRLEAEER3	180850	178826	177963
P27791	P27791	KAPCA_RAT	Prkaca	cAMP-dependent protein kinase catalytic subunit alpha	1	GSEQESVK	GSEQESVK	2	GSEQESVK2			5093.81
P27791	P27791	KAPCA_RAT	Prkaca	cAMP-dependent protein kinase catalytic subunit alpha	1	GSEQESVKEFLAK	GSEQESVKEFLAK	3	GSEQESVKEFLAK3	12292.6	9898.68	15617.4
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	GSETGSETHESDLAPSDK	GSETGSETHESDLAPSDK	3	GSETGSETHESDLAPSDK3	4682.39	2996.34	3394.96
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	GSETQPDTLGAR	GSETQPDTLGAR	2	GSETQPDTLGAR2	57679.1	41041.7	50032.8
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	GSETSLSDCPSGTWGK	GSETSLSDC(UniMod:4)PSGTWGK	2	GSETSLSDC(UniMod:4)PSGTWGK2	10367.5	13632.4	17048.9
P68182	P68182	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	1	GSEVESVK	GSEVESVK	2	GSEVESVK2	69607.8	80943.3	
D3ZRN5	D3ZRN5	D3ZRN5_RAT	Ro60	Ro60, Y RNA binding protein	1	GSEVIQEIK	GSEVIQEIK	2	GSEVIQEIK2	3221.18		10485.6
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	GSEVMGPWVEGSVVTR	GSEVMGPWVEGSVVTR	2	GSEVMGPWVEGSVVTR2	475779	545593	453426
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	GSEVMGPWVEGSVVTR	GSEVMGPWVEGSVVTR	3	GSEVMGPWVEGSVVTR3	933948	1.11789e+06	1.26831e+06
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	GSEVTAMLEK	GSEVTAMLEK	2	GSEVTAMLEK2	105198	101391	102477
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	GSEYAIR	GSEYAIR	2	GSEYAIR2	30938.9	21993.8	19088.3
D3ZYF5	D3ZYF5	D3ZYF5_RAT	Trim58	Tripartite motif-containing 58	1	GSEYMVLSSPSVPVFQDERPR	GSEYMVLSSPSVPVFQDERPR	3	GSEYMVLSSPSVPVFQDERPR3	15751.4	19594.4	20741.1
D3ZZU4	D3ZZU4	D3ZZU4_RAT	Tmem160	Transmembrane protein 160	1	GSFAPGHGPR	GSFAPGHGPR	2	GSFAPGHGPR2	25196.5	21401.7	25074.2
M0R515	M0R515	M0R515_RAT	Nudt13	NAD(+) diphosphatase	1	GSFAQQQR	GSFAQQQR	2	GSFAQQQR2	7076.42		4027.39
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	GSFDIGDAVSK	GSFDIGDAVSK	2	GSFDIGDAVSK2	7.39949e+06	7.96567e+06	8.3561e+06
Q0H8B9	Q0H8B9	CL2DB_RAT	Clec2d11	C-type lectin domain family 2 member D11	1	GSFDYWIGLHR	GSFDYWIGLHR	2	GSFDYWIGLHR2	12924.9	12942.9	19000.7
Q0H8B9	Q0H8B9	CL2DB_RAT	Clec2d11	C-type lectin domain family 2 member D11	1	GSFDYWIGLHR	GSFDYWIGLHR	3	GSFDYWIGLHR3	85267.2	70525.7	86162.3
Q5BJU0	Q5BJU0	Q5BJU0_RAT	Rras2	RAS related 2	1	GSFEEIYK	GSFEEIYK	2	GSFEEIYK2	14557.2	10878.9	14084.1
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	GSFEELCQNQCVK	GSFEELC(UniMod:4)QNQC(UniMod:4)VK	2	GSFEELC(UniMod:4)QNQC(UniMod:4)VK2	58766.7	58400.6	65342.6
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	GSFEPRPDHVLGQTPEIDK	GSFEPRPDHVLGQTPEIDK	3	GSFEPRPDHVLGQTPEIDK3	63245.5	44634.1	33367.8
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	GSFEPRPDHVLGQTPEIDK	GSFEPRPDHVLGQTPEIDK	4	GSFEPRPDHVLGQTPEIDK4	108765	100244	103103
P12369	P12369;P12368	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	0	GSFGELALMYNTPR	GSFGELALMYNTPR	2	GSFGELALMYNTPR2	241175	238792	264384
P12369	P12369;P12368	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	0	GSFGELALMYNTPR	GSFGELALMYNTPR	3	GSFGELALMYNTPR3	89019.9	71372.4	90078
B0LT89	B0LT89;A0A8I6GBQ0	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	0	GSFGEVFK	GSFGEVFK	1	GSFGEVFK1	5002.7		6389.26
B0LT89	B0LT89;A0A8I6GBQ0	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	0	GSFGEVFK	GSFGEVFK	2	GSFGEVFK2	416617	220650	531043
Q6V9V9	Q6V9V9	Q6V9V9_RAT	Stk25	Serine/threonine kinase 25	1	GSFGEVYK	GSFGEVYK	2	GSFGEVYK2	27199.2	27464	29373.2
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	GSFGLPGQGDFLR	GSFGLPGQGDFLR	2	GSFGLPGQGDFLR2	89008.9	138546	80559.8
Q63470	A0A8I5ZP97;Q63470;F1LYY7	DYR1A_RAT	Dyrk1a	Dual specificity tyrosine-phosphorylation-regulated kinase 1A	0	GSFGQVVK	GSFGQVVK	2	GSFGQVVK2	28178.6	31869.9	30156.2
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	GSFICHCDMGYSGK	GSFIC(UniMod:4)HC(UniMod:4)DMGYSGK	2	GSFIC(UniMod:4)HC(UniMod:4)DMGYSGK2	1709.96	1211.62	2695.11
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	GSFICHCDMGYSGK	GSFIC(UniMod:4)HC(UniMod:4)DMGYSGK	3	GSFIC(UniMod:4)HC(UniMod:4)DMGYSGK3	13139.6	13672.6	10720.9
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	GSFICHCQLGYSVK	GSFIC(UniMod:4)HC(UniMod:4)QLGYSVK	3	GSFIC(UniMod:4)HC(UniMod:4)QLGYSVK3		6373.85	
P70473	P70473	AMACR_RAT	Amacr	Alpha-methylacyl-CoA racemase	1	GSFITDEEQHACPR	GSFITDEEQHAC(UniMod:4)PR	3	GSFITDEEQHAC(UniMod:4)PR3	9203.89	9635.65	
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	GSFLQGSEK	GSFLQGSEK	2	GSFLQGSEK2	161121	160261	170835
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GSFLSQEYSGSVANEANVYLNSK	GSFLSQEYSGSVANEANVYLNSK	3	GSFLSQEYSGSVANEANVYLNSK3	27691.7	36016.6	23617.3
F7EUU4	F7EUU4	F7EUU4_RAT	Cops5	COP9 signalosome subunit 5	1	GSFMLGLETHDR	GSFMLGLETHDR	2	GSFMLGLETHDR2	13781.1	16516.2	11902
F7EUU4	F7EUU4	F7EUU4_RAT	Cops5	COP9 signalosome subunit 5	1	GSFMLGLETHDR	GSFMLGLETHDR	3	GSFMLGLETHDR3	44244.6	45692.5	45359.4
F7EUU4	F7EUU4	F7EUU4_RAT	Cops5	COP9 signalosome subunit 5	1	GSFMLGLETHDRK	GSFMLGLETHDRK	3	GSFMLGLETHDRK3	38655.8	35158	28247.5
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	GSFNPGDASGPEAAGSPPEEGGTSEGAPNK	GSFNPGDASGPEAAGSPPEEGGTSEGAPNK	3	GSFNPGDASGPEAAGSPPEEGGTSEGAPNK3	64668.8	41773.9	30206.6
Q641X3	Q641X3	HEXA_RAT	Hexa	Beta-hexosaminidase subunit alpha	1	GSFNPVTHIYTAQDVK	GSFNPVTHIYTAQDVK	2	GSFNPVTHIYTAQDVK2	3849.59	1615.89	
Q641X3	Q641X3	HEXA_RAT	Hexa	Beta-hexosaminidase subunit alpha	1	GSFNPVTHIYTAQDVK	GSFNPVTHIYTAQDVK	3	GSFNPVTHIYTAQDVK3	79729.7	67679.1	58422.8
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	GSFPEPEESSER	GSFPEPEESSER	2	GSFPEPEESSER2	125816	112355	117124
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	GSFPWQAK	GSFPWQAK	1	GSFPWQAK1	19396.8	12781.2	22534.1
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	GSFPWQAK	GSFPWQAK	2	GSFPWQAK2	1.92846e+06	1.37307e+06	1.44336e+06
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	GSFQCGPCQPGFVGDQR	GSFQC(UniMod:4)GPC(UniMod:4)QPGFVGDQR	2	GSFQC(UniMod:4)GPC(UniMod:4)QPGFVGDQR2	935698	1.13927e+06	1.06633e+06
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	GSFQCGPCQPGFVGDQR	GSFQC(UniMod:4)GPC(UniMod:4)QPGFVGDQR	3	GSFQC(UniMod:4)GPC(UniMod:4)QPGFVGDQR3	886531	1.02055e+06	1.02032e+06
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	GSFQVTR	GSFQVTR	2	GSFQVTR2	165084	145723	145977
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	GSFSEQGINEFLR	GSFSEQGINEFLR	2	GSFSEQGINEFLR2	987365	1.10716e+06	1.17852e+06
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	GSFSEQGINEFLR	GSFSEQGINEFLR	3	GSFSEQGINEFLR3	27690.4	31150.2	30298.9
Q5M9G8	Q5M9G8	DCA11_RAT	Dcaf11	DDB1- and CUL4-associated factor 11	1	GSFSLGEQSR	GSFSLGEQSR	2	GSFSLGEQSR2	21287.7	12004.1	21023.2
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	GSFSLSVR	GSFSLSVR	2	GSFSLSVR2	888049	886444	603076
A0A8I6A5H5	A0A8I6A5H5	A0A8I6A5H5_RAT	Rela	RELA proto-oncogene, NF-kB subunit	1	GSFSQADVHR	GSFSQADVHR	2	GSFSQADVHR2	4368.73	6886.08	7539.89
O35568	O35568	FBLN3_RAT	Efemp1	EGF-containing fibulin-like extracellular matrix protein 1	1	GSFTCHCLPGYQK	GSFTC(UniMod:4)HC(UniMod:4)LPGYQK	2	GSFTC(UniMod:4)HC(UniMod:4)LPGYQK2	3008.61	2296.25	1576.6
O35568	O35568	FBLN3_RAT	Efemp1	EGF-containing fibulin-like extracellular matrix protein 1	1	GSFTCHCLPGYQK	GSFTC(UniMod:4)HC(UniMod:4)LPGYQK	3	GSFTC(UniMod:4)HC(UniMod:4)LPGYQK3	59249.1	72594.3	55430.9
D3ZEE4	D3ZEE4	D3ZEE4_RAT	Plxdc1	Plexin domain containing 1	1	GSFTFQAALHQDGR	GSFTFQAALHQDGR	3	GSFTFQAALHQDGR3	4076.51	4248.82	3549.1
P08649	P08649	CO4_RAT	C4	Complement C4	1	GSFTIGDAVSK	GSFTIGDAVSK	2	GSFTIGDAVSK2	2.8151e+06	2.81077e+06	2.49119e+06
P08649	P08649	CO4_RAT	C4	Complement C4	1	GSFTIGDAVSKILQIEK	GSFTIGDAVSKILQIEK	3	GSFTIGDAVSKILQIEK3	6902.8	5504.34	5175.05
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	GSFYCQAR	GSFYC(UniMod:4)QAR	2	GSFYC(UniMod:4)QAR2	268477	354999	364932
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	GSGDSAQITQVSPQR	GSGDSAQITQVSPQR	2	GSGDSAQITQVSPQR2	132036	130438	132458
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	GSGDSAQITQVSPQR	GSGDSAQITQVSPQR	3	GSGDSAQITQVSPQR3	1.25306e+06	1.27341e+06	1.37565e+06
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	GSGDTSSLIDPDTSLSELR	GSGDTSSLIDPDTSLSELR	2	GSGDTSSLIDPDTSLSELR2	8602.71	11495.2	5421.37
A0A8I6AMS6	A0A8I6AMS6	A0A8I6AMS6_RAT	Rangap1	RAN GTPase activating protein 1	1	GSGEEPATPSR	GSGEEPATPSR	2	GSGEEPATPSR2	8904.45		9671.7
A0A8I5ZVT2	A0A8I5ZVT2	A0A8I5ZVT2_RAT	Fndc3a	Fibronectin type III domain containing 3a	1	GSGEFCQCYMGSQK	GSGEFC(UniMod:4)QC(UniMod:4)YMGSQK	2	GSGEFC(UniMod:4)QC(UniMod:4)YMGSQK2		1729.84	
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	GSGEGQGQILQR	GSGEGQGQILQR	2	GSGEGQGQILQR2	9930.18	9310.34	8275.7
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	GSGEQPVLR	GSGEQPVLR	2	GSGEQPVLR2	145745	179046	212505
Q9EQH1	Q9EQH1	GAB2_RAT	Gab2	GRB2-associated-binding protein 2	1	GSGESASWSAESPGK	GSGESASWSAESPGK	2	GSGESASWSAESPGK2	6583.97	7621.31	8078.32
A0A0G2KAF4	A0A0G2KAF4	A0A0G2KAF4_RAT	Nfxl1	Nuclear transcription factor, X-box binding-like 1	1	GSGGAVPSAPGPR	GSGGAVPSAPGPR	2	GSGGAVPSAPGPR2	22696.7	16908.4	25841.1
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	GSGGLNLGNFFASR	GSGGLNLGNFFASR	2	GSGGLNLGNFFASR2	108868	116981	122719
Q9JKE3	Q9JKE3	SCAM5_RAT	Scamp5	Secretory carrier-associated membrane protein 5	1	GSGGSFSK	GSGGSFSK	1	GSGGSFSK1			1063.46
F7EUH5	F7EUH5	F7EUH5_RAT	Plxdc2	Plexin domain containing 2	1	GSGHPAYAEVEPVGEK	GSGHPAYAEVEPVGEK	3	GSGHPAYAEVEPVGEK3	2311.95	5829.64	3474.68
Q5BK20	Q5BK20;D3ZDL0	JUPI2_RAT	Jpt2	Jupiter microtubule associated homolog 2	0	GSGIFDESTPVQTR	GSGIFDESTPVQTR	2	GSGIFDESTPVQTR2	6093.38	5317.48	4306.86
Q641Y2	Q641Y2	NDUS2_RAT	Ndufs2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	1	GSGIQWDLR	GSGIQWDLR	2	GSGIQWDLR2	42370.5	29454	40356.7
Q641Y2	Q641Y2	NDUS2_RAT	Ndufs2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	1	GSGIQWDLRK	GSGIQWDLRK	3	GSGIQWDLRK3	18015.4	18738.6	20596.4
Q9WVR7	Q9WVR7	PPM1F_RAT	Ppm1f	Protein phosphatase 1F	1	GSGMHVAEELVAVAR	GSGMHVAEELVAVAR	3	GSGMHVAEELVAVAR3	22966.9	16444.6	16193.7
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	GSGNLEAIHVIK	GSGNLEAIHVIK	2	GSGNLEAIHVIK2	39788.6	16469.2	29073
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	GSGNLEAIHVIK	GSGNLEAIHVIK	3	GSGNLEAIHVIK3	165961	129094	115882
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	GSGNLEAIHVIKK	GSGNLEAIHVIKK	3	GSGNLEAIHVIKK3	13437.4	8952.92	12595.7
O35977	O35977	O35977_RAT	Gfra2	GDNF family receptor alpha-2	1	GSGNMEEECEK	GSGNMEEEC(UniMod:4)EK	2	GSGNMEEEC(UniMod:4)EK2	4030.82		2649.25
A0A8I5ZVU1	A0A8I5ZVU1	A0A8I5ZVU1_RAT	Uckl1	Uridine-cytidine kinase	1	GSGNTVAIDLIVQHVHSQLEER	GSGNTVAIDLIVQHVHSQLEER	4	GSGNTVAIDLIVQHVHSQLEER4	11218.4	11998.4	5574.47
B3EY83	B3EY83	LCN12_RAT	Lcn12	Epididymal-specific lipocalin-12	1	GSGPGADKENIQVIETDYVK	GSGPGADKENIQVIETDYVK	3	GSGPGADKENIQVIETDYVK3	6197.56	4692.44	
D3ZWA1	D3ZWA1	D3ZWA1_RAT	Mindy2	Ubiquitin carboxyl-terminal hydrolase	1	GSGPVGDTGTCR	GSGPVGDTGTC(UniMod:4)R	2	GSGPVGDTGTC(UniMod:4)R2		89093.6	63302.9
D4A0W1	D4A0W1	D4A0W1_RAT	Emc4	ER membrane protein complex subunit 4	1	GSGQGDSLYPVGYLDK	GSGQGDSLYPVGYLDK	2	GSGQGDSLYPVGYLDK2	33265.4	45690.2	47223.5
Q6AZ45	Q6AZ45	Q6AZ45_RAT	Fcer2	Fc fragment of IgE receptor II	1	GSGQWNDAFCR	GSGQWNDAFC(UniMod:4)R	2	GSGQWNDAFC(UniMod:4)R2	3999.43	5427.41	4895.61
A0A8I6A5F4	A0A8I6A5F4	A0A8I6A5F4_RAT	Tmem40	Transmembrane protein 40	1	GSGSAEGEVEASQLNR	GSGSAEGEVEASQLNR	2	GSGSAEGEVEASQLNR2	34589.6	29796.2	32069.5
P11980	M0RD14;A0A8I6A7K2;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	GSGTAEVELK	GSGTAEVELK	2	GSGTAEVELK2	127317	76324.4	96498
P11980	M0RD14;A0A8I6A7K2;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	GSGTAEVELKK	GSGTAEVELKK	2	GSGTAEVELKK2	22957.1	21025.3	21470.2
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	GSGTASDDEFENLR	GSGTASDDEFENLR	2	GSGTASDDEFENLR2	15888.2	17977.5	7597.75
A0A8I5ZVX1	A0A8I5ZVX1	A0A8I5ZVX1_RAT	Ppfibp2	PPFIA binding protein 2	1	GSGVHGGLIILEPR	GSGVHGGLIILEPR	3	GSGVHGGLIILEPR3	15947.7	22089.5	17722.1
P23606	P23606	TGM1_RAT	Tgm1	Protein-glutamine gamma-glutamyltransferase K	1	GSGVNAAGDGTIR	GSGVNAAGDGTIR	2	GSGVNAAGDGTIR2	6806.66	4107.17	6518.29
Q11205	Q11205	SIA4B_RAT	St3gal2	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2	1	GSGYGQEVDSHNFIMR	GSGYGQEVDSHNFIMR	3	GSGYGQEVDSHNFIMR3	17696.9	14891.7	22658.5
P85171	P85171	MDGA1_RAT	Mdga1	MAM domain-containing glycosylphosphatidylinositol anchor protein 1	1	GSGYLGDIAIDDVTLK	GSGYLGDIAIDDVTLK	2	GSGYLGDIAIDDVTLK2		1819.45	
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	GSGYWQWDELTR	GSGYWQWDELTR	2	GSGYWQWDELTR2	107765	117251	103961
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	GSHCSSSGDPAEYNLR	GSHC(UniMod:4)SSSGDPAEYNLR	3	GSHC(UniMod:4)SSSGDPAEYNLR3	14222	15213	10119.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GSHDSTISLTK	GSHDSTISLTK	2	GSHDSTISLTK2	39732.8	40468.3	40485.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GSHDSTISLTK	GSHDSTISLTK	3	GSHDSTISLTK3	776764	1.06993e+06	992993
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GSHDSTISLTKK	GSHDSTISLTKK	2	GSHDSTISLTKK2	2474.96	5559.76	1610.43
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GSHDSTISLTKK	GSHDSTISLTKK	3	GSHDSTISLTKK3	33725.9	60035.9	60605.2
Q6DGG9	Q6DGG9	CAMLG_RAT	Camlg	Guided entry of tail-anchored proteins factor CAMLG	1	GSHHGLEQYLSR	GSHHGLEQYLSR	3	GSHHGLEQYLSR3	7875.47	7818.42	8904.93
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	GSHMGTVQPIPCLLSMPTR	GSHMGTVQPIPC(UniMod:4)LLSMPTR	3	GSHMGTVQPIPC(UniMod:4)LLSMPTR3	51960.2	62201.4	57830.3
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	GSICLSK	GSIC(UniMod:4)LSK	2	GSIC(UniMod:4)LSK2	60767.1	58940	82907.4
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	GSIDEVDK	GSIDEVDK	2	GSIDEVDK2	26856	23226.2	14575.9
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	GSIDEVDKR	GSIDEVDKR	2	GSIDEVDKR2	27506.8	20936	25581.6
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	GSIEAETMK	GSIEAETMK	2	GSIEAETMK2	7966.9	14341.9	12478.4
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	GSIFNSGSHVLPLEQGK	GSIFNSGSHVLPLEQGK	2	GSIFNSGSHVLPLEQGK2	2.74526e+06	2.3428e+06	2.08492e+06
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	GSIFNSGSHVLPLEQGK	GSIFNSGSHVLPLEQGK	3	GSIFNSGSHVLPLEQGK3	1.67045e+07	1.4207e+07	1.39033e+07
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	GSIILDSGHLSTASSSDDLK	GSIILDSGHLSTASSSDDLK	3	GSIILDSGHLSTASSSDDLK3	7044.34	14869.7	6585.65
A0A0G2K5E4	A0A0G2K5E4	A0A0G2K5E4_RAT	Dnaja3	DnaJ heat shock protein family (Hsp40) member A3	1	GSIITNPCVVCR	GSIITNPC(UniMod:4)VVC(UniMod:4)R	2	GSIITNPC(UniMod:4)VVC(UniMod:4)R2	14894.7	7996.77	13476.9
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	GSILPEDAILPLMK	GSILPEDAILPLMK	2	GSILPEDAILPLMK2	89944.7	92998.4	106877
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	GSILQEVHLK	GSILQEVHLK	2	GSILQEVHLK2	2400.01	4554.52	
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	GSILSYLR	GSILSYLR	2	GSILSYLR2	66855.1	64923.4	59172.2
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	GSIMALVIGSR	GSIMALVIGSR	2	GSIMALVIGSR2	5829.86	6808.26	5503.73
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	GSIPVFWSQR	GSIPVFWSQR	2	GSIPVFWSQR2	37109.9	31258.9	33067.4
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	GSIPVFWSQRPNLK	GSIPVFWSQRPNLK	2	GSIPVFWSQRPNLK2	15344	21419.5	19074.1
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	GSIPVFWSQRPNLK	GSIPVFWSQRPNLK	3	GSIPVFWSQRPNLK3	280530	309128	327381
Q9QX79	Q9QX79	FETUB_RAT	Fetub	Fetuin-B	1	GSIQHLPEQEEPEDSK	GSIQHLPEQEEPEDSK	2	GSIQHLPEQEEPEDSK2	175635	153618	136012
Q9QX79	Q9QX79	FETUB_RAT	Fetub	Fetuin-B	1	GSIQHLPEQEEPEDSK	GSIQHLPEQEEPEDSK	3	GSIQHLPEQEEPEDSK3	752545	670327	688947
Q9QX79	Q9QX79	FETUB_RAT	Fetub	Fetuin-B	1	GSIQHLPEQEEPEDSKGK	GSIQHLPEQEEPEDSKGK	3	GSIQHLPEQEEPEDSKGK3	352298	284523	288297
Q9QX79	Q9QX79	FETUB_RAT	Fetub	Fetuin-B	1	GSIQHLPEQEEPEDSKGK	GSIQHLPEQEEPEDSKGK	4	GSIQHLPEQEEPEDSKGK4	1.00181e+06	1.00064e+06	987467
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	GSISSVDGESCNGSNDR	GSISSVDGESC(UniMod:4)NGSNDR	2	GSISSVDGESC(UniMod:4)NGSNDR2	1385.23	5546.9	3337.65
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	GSITCHHDGWSDIPSCYDSTK	GSITC(UniMod:4)HHDGWSDIPSC(UniMod:4)YDSTK	3	GSITC(UniMod:4)HHDGWSDIPSC(UniMod:4)YDSTK3	77069.4	52385.6	39161.9
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	GSITCHHDGWSDIPSCYDSTK	GSITC(UniMod:4)HHDGWSDIPSC(UniMod:4)YDSTK	4	GSITC(UniMod:4)HHDGWSDIPSC(UniMod:4)YDSTK4	309889	294868	295585
Q5FVP9	Q5FVP9	Q5FVP9_RAT	LOC100361907	Cfh protein	1	GSITCNDDGWSDKPSCYDSTK	GSITC(UniMod:4)NDDGWSDKPSC(UniMod:4)YDSTK	3	GSITC(UniMod:4)NDDGWSDKPSC(UniMod:4)YDSTK3	57064.8	28114.8	35927.6
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	GSITCTYDGWSSTPSCYER	GSITC(UniMod:4)TYDGWSSTPSC(UniMod:4)YER	3	GSITC(UniMod:4)TYDGWSSTPSC(UniMod:4)YER3	88885.3	74983.3	83145
A0A0G2K1P3	A0A0G2K1P3	A0A0G2K1P3_RAT	Bnip2	BCL2 interacting protein 2	1	GSITEYAATEEK	GSITEYAATEEK	2	GSITEYAATEEK2	17321.2	14801.5	7758.84
A0A0G2K1P3	A0A0G2K1P3	A0A0G2K1P3_RAT	Bnip2	BCL2 interacting protein 2	1	GSITEYAATEEKEDGRR	GSITEYAATEEKEDGRR	3	GSITEYAATEEKEDGRR3	14765	18553.7	8710.2
A0A0G2K1P3	A0A0G2K1P3	A0A0G2K1P3_RAT	Bnip2	BCL2 interacting protein 2	1	GSITEYAATEEKEDGRR	GSITEYAATEEKEDGRR	4	GSITEYAATEEKEDGRR4	21255.4	35308	24733.5
P18292	P18292	THRB_RAT	F2	Prothrombin	1	GSKENLSPPLGECLLER	GSKENLSPPLGEC(UniMod:4)LLER	2	GSKENLSPPLGEC(UniMod:4)LLER2	10453.2	16600.6	17304.1
P18292	P18292	THRB_RAT	F2	Prothrombin	1	GSKENLSPPLGECLLER	GSKENLSPPLGEC(UniMod:4)LLER	3	GSKENLSPPLGEC(UniMod:4)LLER3	235864	388317	362134
P18292	P18292	THRB_RAT	F2	Prothrombin	1	GSKENLSPPLGECLLERGR	GSKENLSPPLGEC(UniMod:4)LLERGR	3	GSKENLSPPLGEC(UniMod:4)LLERGR3	28766.2	50410.8	28283.9
P18292	P18292	THRB_RAT	F2	Prothrombin	1	GSKENLSPPLGECLLERGR	GSKENLSPPLGEC(UniMod:4)LLERGR	4	GSKENLSPPLGEC(UniMod:4)LLERGR4	144648	237013	219217
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	GSKPLMPTSTILR	GSKPLMPTSTILR	3	GSKPLMPTSTILR3		5149.71	6594.52
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	GSLANFIGLK	GSLANFIGLK	2	GSLANFIGLK2	42004.2	36331.6	37425.1
Q63615	Q63615	VP33A_RAT	Vps33a	Vacuolar protein sorting-associated protein 33A	1	GSLANHTSIAELIK	GSLANHTSIAELIK	3	GSLANHTSIAELIK3	18664.9	19350.6	13271.3
D3ZTD6	D3ZTD6	D3ZTD6_RAT	Nek3	NIMA-related kinase 3	1	GSLAPLVLK	GSLAPLVLK	2	GSLAPLVLK2	5384.47	4674.28	5240.77
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	GSLASLDSLR	GSLASLDSLR	2	GSLASLDSLR2	30754.1	32708.6	41088.2
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	GSLASLDSLRK	GSLASLDSLRK	2	GSLASLDSLRK2	4036.23	5049.39	4997.27
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	GSLASLDSLRK	GSLASLDSLRK	3	GSLASLDSLRK3	17452.9	15894.5	14258.7
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	GSLCATCGLPVTGR	GSLC(UniMod:4)ATC(UniMod:4)GLPVTGR	2	GSLC(UniMod:4)ATC(UniMod:4)GLPVTGR2	770585	695307	767312
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	GSLCATCGLPVTGR	GSLC(UniMod:4)ATC(UniMod:4)GLPVTGR	3	GSLC(UniMod:4)ATC(UniMod:4)GLPVTGR3	21960.5	23605.2	22335.3
A0A0G2K598	A0A0G2K598	A0A0G2K598_RAT	Tacc2	Transforming, acidic coiled-coil containing protein 2	1	GSLCDTPSSSPK	GSLC(UniMod:4)DTPSSSPK	2	GSLC(UniMod:4)DTPSSSPK2		3035.02	
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	GSLCLDPRPQQVK	GSLC(UniMod:4)LDPRPQQVK	3	GSLC(UniMod:4)LDPRPQQVK3	77660.3	70616.8	82655.9
D4A544	D4A544	D4A544_RAT	Dennd6a	DENN domain containing 6A	1	GSLDEAGAEGR	GSLDEAGAEGR	2	GSLDEAGAEGR2	5069.28	4376.82	3966.75
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	GSLDTMLGLLQSDLSR	GSLDTMLGLLQSDLSR	2	GSLDTMLGLLQSDLSR2	55764.5	54320.1	56418.9
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	GSLDTMLGLLQSDLSR	GSLDTMLGLLQSDLSR	3	GSLDTMLGLLQSDLSR3	43734.6	52124.2	42080.4
Q9WV63	Q9WV63;A0A8I6A456	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	0	GSLDYRPLTTADPIDEHR	GSLDYRPLTTADPIDEHR	3	GSLDYRPLTTADPIDEHR3	272533	271093	238581
Q9WV63	Q9WV63;A0A8I6A456	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	0	GSLDYRPLTTADPIDEHR	GSLDYRPLTTADPIDEHR	4	GSLDYRPLTTADPIDEHR4	533893	624945	616428
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	GSLELGNSSATHLGDELK	GSLELGNSSATHLGDELK	3	GSLELGNSSATHLGDELK3	10205.7	13326.2	8160.87
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	GSLEQDLYNMNNFLEK	GSLEQDLYNMNNFLEK	2	GSLEQDLYNMNNFLEK2	57612.7	82587	82575.2
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	GSLEQDLYNMNNFLEK	GSLEQDLYNMNNFLEK	3	GSLEQDLYNMNNFLEK3	48686.3	49687.6	59846.2
Q5RK30	Q5RK30	SBDS_RAT	Sbds	Ribosome maturation protein SBDS	1	GSLEVLSLK	GSLEVLSLK	2	GSLEVLSLK2	5121.83	3562.71	7256.42
B1WBW4	B1WBW4	ARM10_RAT	Armc10	Armadillo repeat-containing protein 10	1	GSLFFLLYGEECAQK	GSLFFLLYGEEC(UniMod:4)AQK	2	GSLFFLLYGEEC(UniMod:4)AQK2	14133.5	19537.3	16571.9
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	GSLFGGSVK	GSLFGGSVK	2	GSLFGGSVK2	25281.4	28444.6	25207.3
Q5M7W6	Q5M7W6	F234A_RAT	Fam234a	Protein FAM234A	1	GSLGVDGDGVALLHVTR	GSLGVDGDGVALLHVTR	3	GSLGVDGDGVALLHVTR3	2357.35		4256.84
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	GSLIIHAK	GSLIIHAK	2	GSLIIHAK2	47584.2	37977.7	35838.5
Q6TUG0	Q6TUG0	DJB11_RAT	Dnajb11	DnaJ homolog subfamily B member 11	1	GSLIITFDVDFPK	GSLIITFDVDFPK	2	GSLIITFDVDFPK2	15785.1	10901.4	6401.39
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	GSLILGFR	GSLILGFR	2	GSLILGFR2	6318.67	5178.56	10652
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	GSLKDPTVCLNEGMAPPTPPR	GSLKDPTVC(UniMod:4)LNEGMAPPTPPR	3	GSLKDPTVC(UniMod:4)LNEGMAPPTPPR3	113973	104178	141315
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	GSLLADGR	GSLLADGR	2	GSLLADGR2	1.87105e+06	1.45681e+06	1.30657e+06
Q07014	Q9WUD9;Q62844;P50545;Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	0	GSLLDFLK	GSLLDFLK	1	GSLLDFLK1	15061.7	21062.2	27221.4
Q07014	Q9WUD9;Q62844;P50545;Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	0	GSLLDFLK	GSLLDFLK	2	GSLLDFLK2	297198	300988	323224
Q9WUD9	Q9WUD9	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	1	GSLLDFLKGETGK	GSLLDFLKGETGK	3	GSLLDFLKGETGK3	12542.6	6242.52	17640.8
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	GSLLGCSIDITSAADSEAVTYQK	GSLLGC(UniMod:4)SIDITSAADSEAVTYQK	3	GSLLGC(UniMod:4)SIDITSAADSEAVTYQK3	46455	47637.3	51221.1
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	GSLLGCSINISDIR	GSLLGC(UniMod:4)SINISDIR	2	GSLLGC(UniMod:4)SINISDIR2	40447.4	48605	39706.2
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	GSLLGCSINISDIRDLEAITFK	GSLLGC(UniMod:4)SINISDIRDLEAITFK	3	GSLLGC(UniMod:4)SINISDIRDLEAITFK3	25975.3	40845.8	50197.6
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	GSLLGDFLTAYHGLEKPR	GSLLGDFLTAYHGLEKPR	3	GSLLGDFLTAYHGLEKPR3	16811.7	10971	
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	GSLLGDFLTAYHGLEKPR	GSLLGDFLTAYHGLEKPR	4	GSLLGDFLTAYHGLEKPR4	2643.2	4831.84	3237.3
P29266	P29266	3HIDH_RAT	Hibadh	3-hydroxyisobutyrate dehydrogenase, mitochondrial	1	GSLLIDSSTIDPSVSK	GSLLIDSSTIDPSVSK	2	GSLLIDSSTIDPSVSK2	37420.7	30886.2	36935.2
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	GSLLLGGLDTEASR	GSLLLGGLDTEASR	2	GSLLLGGLDTEASR2	234651	249025	222242
Q6P6G5	Q6P6G5	YIPF1_RAT	Yipf1	Protein YIPF1	1	GSLLPVPGK	GSLLPVPGK	2	GSLLPVPGK2	19960	11055	11244.7
Q9R1N3	Q9R1N3	S4A7_RAT	Slc4a7	Sodium bicarbonate cotransporter 3	1	GSLLQIPVK	GSLLQIPVK	2	GSLLQIPVK2	2963.96	5580.24	8152.99
O35093	A0A8I6A2G5;O35093	TIM23_RAT	Timm23	Mitochondrial import inner membrane translocase subunit Tim23	0	GSLLQQSL	GSLLQQSL	2	GSLLQQSL2	7941.06	5865.85	
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	GSLLSEPAIQVR	GSLLSEPAIQVR	2	GSLLSEPAIQVR2	20737	24354.6	22730.5
A0A096MKE0	A0A096MKE0	A0A096MKE0_RAT	Asph	Aspartate-beta-hydroxylase	1	GSLLTLQR	GSLLTLQR	2	GSLLTLQR2	29092	24864.7	21671.3
Q6AYH6	Q6AYH6	EMC10_RAT	Emc10	ER membrane protein complex subunit 10	1	GSLLWNQQDGTLSATQR	GSLLWNQQDGTLSATQR	2	GSLLWNQQDGTLSATQR2	3843.22	5316.57	5030.52
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	GSLMELQR	GSLMELQR	2	GSLMELQR2	10076.2	9884.61	11175.2
A0FKI7	A0FKI7;A0A8I5Y5I3	ACBD5_RAT	Acbd5	Acyl-CoA-binding domain-containing protein 5	0	GSLNEQIALVLIR	GSLNEQIALVLIR	2	GSLNEQIALVLIR2	2037.97	1318.59	2580.22
G3V8Y8	G3V8Y8	G3V8Y8_RAT	Hip1	Huntingtin interacting protein 1	1	GSLNLTQLQQASR	GSLNLTQLQQASR	2	GSLNLTQLQQASR2	9310.65	4516.38	12547.3
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	GSLPTGIEVK	GSLPTGIEVK	2	GSLPTGIEVK2	137106	160163	158951
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	GSLPTSGNISGFVR	GSLPTSGNISGFVR	2	GSLPTSGNISGFVR2	29708.3	39372.3	38589.3
Q62763	Q62762;Q62763;Q62761	KC1G3_RAT	Csnk1g3	Casein kinase I isoform gamma-3	0	GSLPWQGLK	GSLPWQGLK	2	GSLPWQGLK2	88456.6	88544.4	131470
F1M3G7	F1M3G7	AKP13_RAT	Akap13	A-kinase anchor protein 13	1	GSLQAHDTSSLPTVIMR	GSLQAHDTSSLPTVIMR	3	GSLQAHDTSSLPTVIMR3	7720.39	5072.76	7048.51
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	GSLQFEDK	GSLQFEDK	1	GSLQFEDK1	40759.6	31545.9	31510.4
P10716	P10716	CLC4F_RAT	Clec4f	C-type lectin domain family 4 member F	1	GSLQSSNDLGSR	GSLQSSNDLGSR	2	GSLQSSNDLGSR2	11808.3	16539.1	6133.18
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	GSLSATGEACR	GSLSATGEAC(UniMod:4)R	2	GSLSATGEAC(UniMod:4)R2	98493.2	118976	76008.3
D3ZE26	D3ZE26	D3ZE26_RAT	Tmcc2	Transmembrane and coiled-coil domain family 2	1	GSLSGLSQATHTAVVSKPR	GSLSGLSQATHTAVVSKPR	3	GSLSGLSQATHTAVVSKPR3	41052.9	36399	39944.8
D3ZE26	D3ZE26	D3ZE26_RAT	Tmcc2	Transmembrane and coiled-coil domain family 2	1	GSLSGLSQATHTAVVSKPR	GSLSGLSQATHTAVVSKPR	4	GSLSGLSQATHTAVVSKPR4	47043.4	47152.6	45429
P35565	P35565	CALX_RAT	Canx	Calnexin	1	GSLSGWILSK	GSLSGWILSK	2	GSLSGWILSK2	1.34383e+06	1.29464e+06	984578
Q6AYD4	Q6AYD4	ESAM_RAT	Esam	Endothelial cell-selective adhesion molecule	1	GSLSNKPGVTLVHSISTR	GSLSNKPGVTLVHSISTR	3	GSLSNKPGVTLVHSISTR3	28452.8	29005.2	30358.5
Q6AYD4	Q6AYD4	ESAM_RAT	Esam	Endothelial cell-selective adhesion molecule	1	GSLSNKPGVTLVHSISTR	GSLSNKPGVTLVHSISTR	4	GSLSNKPGVTLVHSISTR4	155263	186461	154204
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	GSLSTAEDLGDVSTLEEELKK	GSLSTAEDLGDVSTLEEELKK	3	GSLSTAEDLGDVSTLEEELKK3	28680	23746.7	10276.6
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	GSLTDSQR	GSLTDSQR	2	GSLTDSQR2	1.28285e+06		1.704e+06
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	GSLTFEPLTLVPIQTK	GSLTFEPLTLVPIQTK	2	GSLTFEPLTLVPIQTK2	56882.2	38475.2	52697.5
D3ZN06	D3ZN06	D3ZN06_RAT	Cd248	CD248 molecule	1	GSLTGVQTCR	GSLTGVQTC(UniMod:4)R	2	GSLTGVQTC(UniMod:4)R2	47701.1	56081.6	61924.3
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	GSLTLEEK	GSLTLEEK	2	GSLTLEEK2	14951.2	18097	10933.7
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	GSLTPGYMFK	GSLTPGYMFK	2	GSLTPGYMFK2	196986	194884	176791
A0A8J8Y8E0	A0A8J8Y8E0	A0A8J8Y8E0_RAT	Fibp	FGF1 intracellular binding protein	1	GSLVDNIQQHFLLSDR	GSLVDNIQQHFLLSDR	3	GSLVDNIQQHFLLSDR3	17716	13327.1	10135.7
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	GSLVDYLR	GSLVDYLR	2	GSLVDYLR2	142970	130705	140689
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	GSLVPASHANLQAAQDFVR	GSLVPASHANLQAAQDFVR	3	GSLVPASHANLQAAQDFVR3	349605	387082	327773
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	GSLVPASHANLQAAQDFVR	GSLVPASHANLQAAQDFVR	4	GSLVPASHANLQAAQDFVR4	171559	203064	169847
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	GSLVPASHANLQAAQDFVRR	GSLVPASHANLQAAQDFVRR	3	GSLVPASHANLQAAQDFVRR3	665716	927826	768242
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	GSLVPASHANLQAAQDFVRR	GSLVPASHANLQAAQDFVRR	4	GSLVPASHANLQAAQDFVRR4	682210	963692	930761
Q66H84	Q66H84	MAPK3_RAT	Mapkapk3	MAP kinase-activated protein kinase 3	1	GSLVPQPGALGAPALGGAPAPGVR	GSLVPQPGALGAPALGGAPAPGVR	3	GSLVPQPGALGAPALGGAPAPGVR3	17798.2	28374	25120.8
D3Z9C0	D3Z9C0	D3Z9C0_RAT	Mios	Meiosis regulator for oocyte development	1	GSLVYAGIK	GSLVYAGIK	2	GSLVYAGIK2	10880.5	6384.03	7169.29
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	GSLYTWTPPSTPSFR	GSLYTWTPPSTPSFR	2	GSLYTWTPPSTPSFR2	71318	62508.1	91623.1
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	GSMAGSTGVHDTVVNQLLSK	GSMAGSTGVHDTVVNQLLSK	3	GSMAGSTGVHDTVVNQLLSK3	74868.8	63724.7	51772.4
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	GSMEGSPCLPR	GSMEGSPC(UniMod:4)LPR	2	GSMEGSPC(UniMod:4)LPR2	5497.48	10418.1	6040.73
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	GSMFSELPARPPQK	GSMFSELPARPPQK	2	GSMFSELPARPPQK2	61520.3	48657.3	58575.1
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	GSMFSELPARPPQK	GSMFSELPARPPQK	3	GSMFSELPARPPQK3	553775	513936	572101
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	GSMFSELPARPPQKEDK	GSMFSELPARPPQKEDK	3	GSMFSELPARPPQKEDK3	42159.5	43919.2	43070.7
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	GSMFSELPARPPQKEDK	GSMFSELPARPPQKEDK	4	GSMFSELPARPPQKEDK4	77883.9	86739.6	75072.3
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	GSMIAAPDPEK	GSMIAAPDPEK	2	GSMIAAPDPEK2	13704.6	15485.6	16755
D4A8B0	D4A8B0	D4A8B0_RAT	Sec14l5	SEC14-like lipid binding 5	1	GSMSSLESCASR	GSMSSLESC(UniMod:4)ASR	2	GSMSSLESC(UniMod:4)ASR2	5495.09	1402.31	3992.13
F1LXS3	F1LXS3	F1LXS3_RAT	Matn2	Matrilin 2	1	GSMTGLALK	GSMTGLALK	2	GSMTGLALK2	10860.4	5334.92	5721.08
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	GSMTMSSPWITPQLQDK	GSMTMSSPWITPQLQDK	2	GSMTMSSPWITPQLQDK2	10768	8550.25	7488.58
F1LQ00	F1LQ00	F1LQ00_RAT	Col5a2	Collagen type V alpha 2 chain	1	GSNDLEIK	GSNDLEIK	2	GSNDLEIK2	11561.1	4737.35	8279.81
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	GSNDMQYQHVIETLIGK	GSNDMQYQHVIETLIGK	2	GSNDMQYQHVIETLIGK2	9520.64	9184.55	7354.29
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	GSNDMQYQHVIETLIGK	GSNDMQYQHVIETLIGK	3	GSNDMQYQHVIETLIGK3	145278	174923	164167
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	GSNDMQYQHVIETLIGKK	GSNDMQYQHVIETLIGKK	3	GSNDMQYQHVIETLIGKK3	2882.63		6743.24
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	GSNDMQYQHVIETLIGKK	GSNDMQYQHVIETLIGKK	4	GSNDMQYQHVIETLIGKK4	1681.36	11894.1	8433.13
A0A8I6A182	A0A8I6A182	A0A8I6A182_RAT	Pitpnc1	Phosphatidylinositol transfer protein, cytoplasmic 1	1	GSNDSIFDSEAK	GSNDSIFDSEAK	2	GSNDSIFDSEAK2	42336.8	41499.2	39585.1
Q5XI81	Q80WE1;Q5XI81	FXR1_RAT	Fxr1	RNA-binding protein FXR1	0	GSNGAFYK	GSNGAFYK	2	GSNGAFYK2	4719.19	5557.29	7537.09
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	GSNLGQHVQDVLGMVR	GSNLGQHVQDVLGMVR	3	GSNLGQHVQDVLGMVR3	28799.6	28533.4	29226.3
Q8K4Y7	Q8K4Y7	CANT1_RAT	Cant1	Soluble calcium-activated nucleotidase 1	1	GSNLLLSAAQDFR	GSNLLLSAAQDFR	2	GSNLLLSAAQDFR2	7817.75	6029.95	11283.3
Q6P7B4	Q6P7B4	GAK1B_RAT	Gask1b	Golgi-associated kinase 1B	1	GSNLQQPR	GSNLQQPR	2	GSNLQQPR2	11824.9	19190.5	26290.8
Q5XI72	Q5XI72	IF4H_RAT	Eif4h	Eukaryotic translation initiation factor 4H	1	GSNMDFREPTEEER	GSNMDFREPTEEER	3	GSNMDFREPTEEER3	24395	27419.6	22886.9
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	GSNNVALGYDEGSIIVK	GSNNVALGYDEGSIIVK	2	GSNNVALGYDEGSIIVK2	84879.6	76114.6	69443.5
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	GSNNVALGYDEGSIIVK	GSNNVALGYDEGSIIVK	3	GSNNVALGYDEGSIIVK3	8929.64	8653.12	5436.76
Q9Z142	Q9Z142	TMM33_RAT	Tmem33	Transmembrane protein 33	1	GSNSLPLLR	GSNSLPLLR	2	GSNSLPLLR2	78094.7	146062	110874
P12007	P12007	IVD_RAT	Ivd	Isovaleryl-CoA dehydrogenase, mitochondrial	1	GSNTCELVFEDCKVPAANILSQESK	GSNTC(UniMod:4)ELVFEDC(UniMod:4)KVPAANILSQESK	3	GSNTC(UniMod:4)ELVFEDC(UniMod:4)KVPAANILSQESK3	12419.9	5939.31	6626.02
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	GSNTCEVHFENTR	GSNTC(UniMod:4)EVHFENTR	2	GSNTC(UniMod:4)EVHFENTR2	1730.18	3335.62	3114.67
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	GSNTCEVHFENTR	GSNTC(UniMod:4)EVHFENTR	3	GSNTC(UniMod:4)EVHFENTR3	32785.1	34961.2	26689.2
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	GSNTDAPDTMTGNCLLQR	GSNTDAPDTMTGNC(UniMod:4)LLQR	2	GSNTDAPDTMTGNC(UniMod:4)LLQR2	37131.9	51634.5	39864.5
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	GSNTDAPDTMTGNCLLQR	GSNTDAPDTMTGNC(UniMod:4)LLQR	3	GSNTDAPDTMTGNC(UniMod:4)LLQR3	14516.6	15774.9	13753.8
Q4FZV0	Q4FZV0	MANBA_RAT	Manba	Beta-mannosidase	1	GSNWIPADSFQDK	GSNWIPADSFQDK	2	GSNWIPADSFQDK2	31433.6	32687.4	31945.2
Q63515	Q63515	C4BPB_RAT	C4bpb	C4b-binding protein beta chain	1	GSNWSQCLEDHTWAPPLPICR	GSNWSQC(UniMod:4)LEDHTWAPPLPIC(UniMod:4)R	3	GSNWSQC(UniMod:4)LEDHTWAPPLPIC(UniMod:4)R3	753193	840508	720188
Q63515	Q63515	C4BPB_RAT	C4bpb	C4b-binding protein beta chain	1	GSNWSQCLEDHTWAPPLPICR	GSNWSQC(UniMod:4)LEDHTWAPPLPIC(UniMod:4)R	4	GSNWSQC(UniMod:4)LEDHTWAPPLPIC(UniMod:4)R4	17399.9	16518	23340.9
O08774	O08774	RGS12_RAT	Rgs12	Regulator of G-protein signaling 12	1	GSPADFVGLR	GSPADFVGLR	2	GSPADFVGLR2	14411.6	20209.2	20127.4
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	GSPASGALEPTK	GSPASGALEPTK	2	GSPASGALEPTK2	20292.8	12516.1	32381.8
P02767	P02767	TTHY_RAT	Ttr	Transthyretin	1	GSPAVDVAVK	GSPAVDVAVK	1	GSPAVDVAVK1	15301.3	9350.09	9202.54
P02767	P02767	TTHY_RAT	Ttr	Transthyretin	1	GSPAVDVAVK	GSPAVDVAVK	2	GSPAVDVAVK2	3.47871e+06	3.44459e+06	3.6833e+06
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	GSPDQPLALPLPEQVQEQVQEQVQPK	GSPDQPLALPLPEQVQEQVQEQVQPK	3	GSPDQPLALPLPEQVQEQVQEQVQPK3	256537	183698	217700
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	GSPDQPLALPLPEQVQEQVQEQVQPKPLES	GSPDQPLALPLPEQVQEQVQEQVQPKPLES	4	GSPDQPLALPLPEQVQEQVQEQVQPKPLES4	36433.8	47155.8	58479
A0A8I6A6S4	A0A8I6A6S4	A0A8I6A6S4_RAT	Stim2	Stromal interaction molecule 2	1	GSPECVGLTETK	GSPEC(UniMod:4)VGLTETK	2	GSPEC(UniMod:4)VGLTETK2	7327.34	9226.63	6962.4
F1MAA4	F1MAA4	F1MAA4_RAT	Atp13a2	ATPase cation transporting 13A2	1	GSPELVASLCSPETVPR	GSPELVASLC(UniMod:4)SPETVPR	2	GSPELVASLC(UniMod:4)SPETVPR2	4226.07	4639.82	1828.99
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	GSPFKPAK	GSPFKPAK	1	GSPFKPAK1	6919.15	4222	6233.26
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	GSPFKPAK	GSPFKPAK	2	GSPFKPAK2	1.35652e+06	1.32264e+06	1.36663e+06
Q62991	Q62991	SCFD1_RAT	Scfd1	Sec1 family domain-containing protein 1	1	GSPFPEVAESVQQELESYR	GSPFPEVAESVQQELESYR	3	GSPFPEVAESVQQELESYR3	6078.03	8396.9	5597.18
A0A8I5ZWZ4	A0A8I5ZWZ4	A0A8I5ZWZ4_RAT	Nmt2	Glycylpeptide N-tetradecanoyltransferase	1	GSPGGDLGAK	GSPGGDLGAK	2	GSPGGDLGAK2	7682.63	9430.36	10269.5
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	GSPGLSK	GSPGLSK	1	GSPGLSK1	136822		129521
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	GSPGTHSTKPFSGATPTPFLLAGDQK	GSPGTHSTKPFSGATPTPFLLAGDQK	3	GSPGTHSTKPFSGATPTPFLLAGDQK3	5481.78	7558.07	6422.94
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	GSPGTHSTKPFSGATPTPFLLAGDQK	GSPGTHSTKPFSGATPTPFLLAGDQK	4	GSPGTHSTKPFSGATPTPFLLAGDQK4	26940.5	66543.2	22203
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	GSPHINPTDANAR	GSPHINPTDANAR	2	GSPHINPTDANAR2	11832.8	9172.6	7773.01
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	GSPHINPTDANAR	GSPHINPTDANAR	3	GSPHINPTDANAR3	128687	154369	130019
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	GSPKPAVVEAVTTAGSQDIQVLVDEVTK	GSPKPAVVEAVTTAGSQDIQVLVDEVTK	3	GSPKPAVVEAVTTAGSQDIQVLVDEVTK3	3216.4	2971.01	5744.84
A0A0G2K264	A0A0G2K264	A0A0G2K264_RAT	Dap3	Death associated protein 3	1	GSPLGEVVEQGLTR	GSPLGEVVEQGLTR	2	GSPLGEVVEQGLTR2	15341	3255.06	5744.56
P82808	Q4KMC4;P82808	GFPT1_RAT	Gfpt1	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1	0	GSPLLIGVR	GSPLLIGVR	2	GSPLLIGVR2	3471.32		3628.71
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	GSPLPLVSWMK	GSPLPLVSWMK	2	GSPLPLVSWMK2	13550.4	20207.6	15537
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	GSPLSSLLPSASVPESMTVHELR	GSPLSSLLPSASVPESMTVHELR	3	GSPLSSLLPSASVPESMTVHELR3	17456.8	21444.2	27143.1
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	GSPLVTHDLLR	GSPLVTHDLLR	2	GSPLVTHDLLR2	14418.7	11395.9	
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	GSPLVTHDLLR	GSPLVTHDLLR	3	GSPLVTHDLLR3	19598.2	13820.5	14596
P47942	P47942	DPYL2_RAT	Dpysl2	Dihydropyrimidinase-related protein 2	1	GSPLVVISQGK	GSPLVVISQGK	2	GSPLVVISQGK2	38595.4	34294.5	27786.1
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	GSPLVVSLVGALLR	GSPLVVSLVGALLR	2	GSPLVVSLVGALLR2	7482.15		
P30349	P30349	LKHA4_RAT	Lta4h	Leukotriene A-4 hydrolase	1	GSPMEISLPIALSK	GSPMEISLPIALSK	2	GSPMEISLPIALSK2	4611.22	4783.09	6488.63
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	GSPMSFEDSSR	GSPMSFEDSSR	2	GSPMSFEDSSR2	18450.6	30389.2	28411.5
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	GSPPSQEDR	GSPPSQEDR	2	GSPPSQEDR2			10974
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	GSPQAAMDLSFATR	GSPQAAMDLSFATR	2	GSPQAAMDLSFATR2	20841.5	13198.7	19727.2
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	GSPQPALR	GSPQPALR	2	GSPQPALR2	31531.9	49243.1	45541.3
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	GSPSEDNVVTYSCR	GSPSEDNVVTYSC(UniMod:4)R	2	GSPSEDNVVTYSC(UniMod:4)R2	39350.2	38620.5	43195.2
P14056	P14056	ARAF_RAT	Araf	Serine/threonine-protein kinase A-Raf	1	GSPSPASVSSGR	GSPSPASVSSGR	2	GSPSPASVSSGR2	48154.2	53438.1	57195.2
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	GSPTGSSPNNASELSLASLTEK	GSPTGSSPNNASELSLASLTEK	3	GSPTGSSPNNASELSLASLTEK3	8007.16	4810.32	13312.7
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	GSPTLQQELADTK	GSPTLQQELADTK	2	GSPTLQQELADTK2	39866.7	43555.9	40607.8
Q5FVG1	Q5FVG1	GP157_RAT	Gpr157	G-protein coupled receptor 157	1	GSPTSMADKK	GSPTSMADKK	2	GSPTSMADKK2	4331.65		3426.47
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	GSPVQLGAK	GSPVQLGAK	1	GSPVQLGAK1	11044.9	13406	11322.9
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	GSPVQLGAK	GSPVQLGAK	2	GSPVQLGAK2	3.67013e+06	4.23885e+06	4.50562e+06
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	GSPVSEIGWETPPPESPR	GSPVSEIGWETPPPESPR	2	GSPVSEIGWETPPPESPR2	9642.89	20560.9	15183.6
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	GSPVSEIGWETPPPESPR	GSPVSEIGWETPPPESPR	3	GSPVSEIGWETPPPESPR3	9217.34	6821.13	12049.1
Q498S0	Q498S0	Q498S0_RAT	Chst12	Carbohydrate sulfotransferase	1	GSPYRDPLDIPR	GSPYRDPLDIPR	3	GSPYRDPLDIPR3	51179.5	45293.3	50029.6
A0A8I6AD67	A0A8I6AD67	A0A8I6AD67_RAT	Parp9	Poly [ADP-ribose] polymerase	1	GSQADLIEAVMK	GSQADLIEAVMK	2	GSQADLIEAVMK2	11698.9	7466.38	8751.53
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	GSQAQPDSPSAQLALIAASQSFLQPGGK	GSQAQPDSPSAQLALIAASQSFLQPGGK	3	GSQAQPDSPSAQLALIAASQSFLQPGGK3	2.03205e+06	1.95471e+06	2.12972e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	GSQAQPDSPSAQLALIAASQSFLQPGGK	GSQAQPDSPSAQLALIAASQSFLQPGGK	4	GSQAQPDSPSAQLALIAASQSFLQPGGK4	97906	64090.3	76226.6
D3ZJF8	D3ZJF8;F7EZQ4	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	0	GSQAVSYTR	GSQAVSYTR	2	GSQAVSYTR2	1.44346e+06	1.49845e+06	1.61448e+06
B3DMA2	B3DMA2	ACD11_RAT	Acad11	Acyl-CoA dehydrogenase family member 11	1	GSQAYVLR	GSQAYVLR	2	GSQAYVLR2	27593.6	18099.3	25966.7
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	GSQELGMSNVQELSLR	GSQELGMSNVQELSLR	2	GSQELGMSNVQELSLR2	7662.07	3588.5	2619.6
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	GSQFGQSCCLR	GSQFGQSC(UniMod:4)C(UniMod:4)LR	2	GSQFGQSC(UniMod:4)C(UniMod:4)LR2	16965.4	25614.6	19233.8
Q6MG56	Q6MG56	LY66F_RAT	Ly6g6f	Lymphocyte antigen 6 complex locus protein G6f	1	GSQFSVK	GSQFSVK	1	GSQFSVK1	12228.8	13466.9	13408.1
F1LQ00	F1LQ00	F1LQ00_RAT	Col5a2	Collagen type V alpha 2 chain	1	GSQFTYGDYK	GSQFTYGDYK	2	GSQFTYGDYK2	16110.2	11192.2	11580.6
P36372	P36372	TAP2_RAT	Tap2	Antigen peptide transporter 2	1	GSQLAVGQK	GSQLAVGQK	1	GSQLAVGQK1	3774.21	3501.15	2313.97
P36372	P36372	TAP2_RAT	Tap2	Antigen peptide transporter 2	1	GSQLAVGQK	GSQLAVGQK	2	GSQLAVGQK2	48153.5	63188.2	68106.8
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	GSQLQER	GSQLQER	2	GSQLQER2			92257.1
A0A8I6AFL1	A0A8I6AFL1	A0A8I6AFL1_RAT	ENSRNOG00000066785	Ig-like domain-containing protein	1	GSQNINNYLAWYQQK	GSQNINNYLAWYQQK	2	GSQNINNYLAWYQQK2	135596	108076	120122
A0A8I6AFL1	A0A8I6AFL1	A0A8I6AFL1_RAT	ENSRNOG00000066785	Ig-like domain-containing protein	1	GSQNINNYLAWYQQK	GSQNINNYLAWYQQK	3	GSQNINNYLAWYQQK3	73028.4	65640.7	62921.6
P31325	P31325	PHKG2_RAT	Phkg2	Phosphorylase b kinase gamma catalytic chain, liver/testis isoform	1	GSQPWNLTPR	GSQPWNLTPR	2	GSQPWNLTPR2	18615.5	15949.9	11367.6
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	GSQSGDYLYIFDGSDGR	GSQSGDYLYIFDGSDGR	2	GSQSGDYLYIFDGSDGR2	8103.11	4146.53	6136.86
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	GSQTVSYTR	GSQTVSYTR	2	GSQTVSYTR2	1.67618e+06	1.74642e+06	1.89083e+06
P12928	P12928	KPYR_RAT	Pklr	Pyruvate kinase PKLR	1	GSQVLVTVDPK	GSQVLVTVDPK	2	GSQVLVTVDPK2	3762.15	3566.9	3338.96
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	GSQVTHSSLEMSCYDSDDANPR	GSQVTHSSLEMSC(UniMod:4)YDSDDANPR	3	GSQVTHSSLEMSC(UniMod:4)YDSDDANPR3	5984.9	3831.46	4686.09
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	GSQYWRFEDGVLDPDYPR	GSQYWRFEDGVLDPDYPR	3	GSQYWRFEDGVLDPDYPR3	79754.5	89775.2	60059.1
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	GSRPDPSPVYPR	GSRPDPSPVYPR	2	GSRPDPSPVYPR2	15287.5	12997.3	12370.2
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	GSRPDPSPVYPR	GSRPDPSPVYPR	3	GSRPDPSPVYPR3	193090	221046	229386
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	GSRPIDTSR	GSRPIDTSR	2	GSRPIDTSR2			59257.9
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	GSSETPATDVFSSTEEGEK	GSSETPATDVFSSTEEGEK	2	GSSETPATDVFSSTEEGEK2	87298.3	92645.1	95557.6
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	GSSETPATDVFSSTEEGEKR	GSSETPATDVFSSTEEGEKR	3	GSSETPATDVFSSTEEGEKR3	79983	73973.6	70635.1
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	GSSFLTSK	GSSFLTSK	2	GSSFLTSK2	13975.9	22215.1	15991
D3ZIS7	D3ZIS7	D3ZIS7_RAT	C18h5orf46	Similar to AVLV472	1	GSSFMELEGDPGQQPSK	GSSFMELEGDPGQQPSK	2	GSSFMELEGDPGQQPSK2	144032	148308	144714
D3ZIS7	D3ZIS7	D3ZIS7_RAT	C18h5orf46	Similar to AVLV472	1	GSSFMELEGDPGQQPSK	GSSFMELEGDPGQQPSK	3	GSSFMELEGDPGQQPSK3	36474	37182.9	29503.1
Q6P6S9	Q6P6S9	ENTP5_RAT	Entpd5	Ectonucleoside triphosphate diphosphohydrolase 5	1	GSSFYAFSYYYDR	GSSFYAFSYYYDR	2	GSSFYAFSYYYDR2	35860.4	26414.1	28464.2
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	GSSGCVECLEVTCR	GSSGC(UniMod:4)VEC(UniMod:4)LEVTC(UniMod:4)R	2	GSSGC(UniMod:4)VEC(UniMod:4)LEVTC(UniMod:4)R2	18420.8	20354.1	16353.7
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	GSSGGAYMLQK	GSSGGAYMLQK	2	GSSGGAYMLQK2	5559.55	6858.5	3726.78
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	GSSGGSGAKPSDTASEATR	GSSGGSGAKPSDTASEATR	2	GSSGGSGAKPSDTASEATR2			1329.18
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	GSSGGSGAKPSDTASEATRPATLNR	GSSGGSGAKPSDTASEATRPATLNR	3	GSSGGSGAKPSDTASEATRPATLNR3	23718.2	18511.8	27842.1
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	GSSGGSGAKPSDTASEATRPATLNR	GSSGGSGAKPSDTASEATRPATLNR	4	GSSGGSGAKPSDTASEATRPATLNR4	148866	190828	162220
Q6IFU8	Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	1	GSSGLGGGSSR	GSSGLGGGSSR	2	GSSGLGGGSSR2			29764.9
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	GSSGPEANVFSEWLESVK	GSSGPEANVFSEWLESVK	2	GSSGPEANVFSEWLESVK2	49379.8	51395.3	54975.3
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	GSSGPEANVFSEWLESVK	GSSGPEANVFSEWLESVK	3	GSSGPEANVFSEWLESVK3	3156.57		5542.21
F1M6V8	F1M6V8	F1M6V8_RAT	Strn4	Striatin 4	1	GSSGPTQINQVVSHPNQPLTITAHDDR	GSSGPTQINQVVSHPNQPLTITAHDDR	4	GSSGPTQINQVVSHPNQPLTITAHDDR4	5868.85	2615.2	6544.67
Q99MS0	Q99MS0;Q9Z1J8	S14L2_RAT	Sec14l2	SEC14-like protein 2	0	GSSHQVEYEILFPGCVLR	GSSHQVEYEILFPGC(UniMod:4)VLR	3	GSSHQVEYEILFPGC(UniMod:4)VLR3	10935.7	8658.21	10950.1
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	GSSIHQDFLGFYVLDSFR	GSSIHQDFLGFYVLDSFR	3	GSSIHQDFLGFYVLDSFR3	117666	88499.4	99679.4
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	GSSIVWCQPDSK	GSSIVWC(UniMod:4)QPDSK	2	GSSIVWC(UniMod:4)QPDSK2	34477.2	27265.2	44422.5
F7EYC4	F7EYC4	F7EYC4_RAT	Tom1	Target of myb1 membrane trafficking protein	1	GSSLADQR	GSSLADQR	2	GSSLADQR2	49705.6	43441.6	34970.1
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	GSSLHHGRPHLGSVPDFR	GSSLHHGRPHLGSVPDFR	4	GSSLHHGRPHLGSVPDFR4	72522.1	93418.8	91917.6
Q63313	Q63313	LBP_RAT	Lbp	Lipopolysaccharide-binding protein	1	GSSLKPLPGR	GSSLKPLPGR	2	GSSLKPLPGR2		10800.5	
B0BN30	B0BN30	B0BN30_RAT	Mtch1	Mitochondrial carrier 1	1	GSSLLFR	GSSLLFR	2	GSSLLFR2	17116.8	11911.4	16623.1
A0A0G2K2M3	A0A0G2K2M3	A0A0G2K2M3_RAT	Stat6	Signal transducer and activator of transcription	1	GSSLLQHISTLESIYQR	GSSLLQHISTLESIYQR	3	GSSLLQHISTLESIYQR3	6905.63	7818.45	6971.76
B5DFN2	B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	1	GSSNFCVK	GSSNFC(UniMod:4)VK	2	GSSNFC(UniMod:4)VK2	142883	138465	152411
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	GSSNHNLLSVSR	GSSNHNLLSVSR	3	GSSNHNLLSVSR3	19783.7	16271	28190.9
Q63372	Q63372	NRX1A_RAT	Nrxn1	Neurexin-1	1	GSSNKPLNDNQWHNVMISR	GSSNKPLNDNQWHNVMISR	4	GSSNKPLNDNQWHNVMISR4	3869.3	11401.6	9372.76
P24050	P24050	RS5_RAT	Rps5	Small ribosomal subunit protein uS7	1	GSSNSYAIK	GSSNSYAIK	2	GSSNSYAIK2	22203.2	24334	15881.6
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	GSSPDVHTLLEITEESDAVLVDK	GSSPDVHTLLEITEESDAVLVDK	3	GSSPDVHTLLEITEESDAVLVDK3	6217.54	4579.4	12760
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	GSSPESLIHGIAESR	GSSPESLIHGIAESR	3	GSSPESLIHGIAESR3	16116.2	4796.64	18033.5
M0RCP2	M0RCP2	M0RCP2_RAT	Sh3pxd2b	SH3 and PX domains 2B	1	GSSPKPPGVILPMIPAK	GSSPKPPGVILPMIPAK	3	GSSPKPPGVILPMIPAK3	20866.7	12078.9	13076.8
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	GSSQLDVNEEVEALIVK	GSSQLDVNEEVEALIVK	2	GSSQLDVNEEVEALIVK2		5640.68	
P22734	P22734	COMT_RAT	Comt	Catechol O-methyltransferase	1	GSSSFECTHYSSYLEYMK	GSSSFEC(UniMod:4)THYSSYLEYMK	3	GSSSFEC(UniMod:4)THYSSYLEYMK3	23307.4	20109.8	16279.5
A0A0G2JWA3	A0A0G2JWA3	A0A0G2JWA3_RAT	Xpo7	Exportin 7	1	GSSSYSQLLAATCLTK	GSSSYSQLLAATC(UniMod:4)LTK	2	GSSSYSQLLAATC(UniMod:4)LTK2	2904.78	5530.33	7567.82
A0A8I6AS17	A0A8I6AS17	A0A8I6AS17_RAT	Bsdc1	BSD domain containing 1	1	GSSTDISEDWEK	GSSTDISEDWEK	2	GSSTDISEDWEK2	4270.32	5957.95	6648.29
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	GSSTIATAAADKIPGLLGVFQK	GSSTIATAAADKIPGLLGVFQK	3	GSSTIATAAADKIPGLLGVFQK3	17889.4	12850.2	20396.4
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	GSSTITCNR	GSSTITC(UniMod:4)NR	2	GSSTITC(UniMod:4)NR2	33927.6		37803.2
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	GSSTSVDNRELEQHIQTSDPENFQSEER	GSSTSVDNRELEQHIQTSDPENFQSEER	4	GSSTSVDNRELEQHIQTSDPENFQSEER4	2391.22	7158.02	4283.57
D4A6U4	D4A6U4	D4A6U4_RAT	Tecpr2	Tectonin beta-propeller repeat containing 2	1	GSSVASSVASEQR	GSSVASSVASEQR	2	GSSVASSVASEQR2	2161.76	3235.42	5120.95
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	GSSVVAYEGQSWHDYCFHCK	GSSVVAYEGQSWHDYC(UniMod:4)FHC(UniMod:4)K	3	GSSVVAYEGQSWHDYC(UniMod:4)FHC(UniMod:4)K3	40775.1	43866.2	42508.6
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	GSSVVAYEGQSWHDYCFHCK	GSSVVAYEGQSWHDYC(UniMod:4)FHC(UniMod:4)K	4	GSSVVAYEGQSWHDYC(UniMod:4)FHC(UniMod:4)K4	220612	189528	243941
P53610	P53610	PGTB1_RAT	Pggt1b	Geranylgeranyl transferase type-1 subunit beta	1	GSSYLGIPFNPSK	GSSYLGIPFNPSK	2	GSSYLGIPFNPSK2	14371	30379.9	17058
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	GSSYNPPLPPLK	GSSYNPPLPPLK	2	GSSYNPPLPPLK2	498843	479957	465934
Q1HCL7	Q1HCL7	NAKD2_RAT	Nadk2	NAD kinase 2, mitochondrial	1	GSSYSGLLER	GSSYSGLLER	2	GSSYSGLLER2	7444.76	8292.5	5892.33
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	GSTALHYCCLTDNAECLK	GSTALHYC(UniMod:4)C(UniMod:4)LTDNAEC(UniMod:4)LK	3	GSTALHYC(UniMod:4)C(UniMod:4)LTDNAEC(UniMod:4)LK3	27507.4	42632.2	30629.2
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	GSTAPVGGGSFPNITPR	GSTAPVGGGSFPNITPR	2	GSTAPVGGGSFPNITPR2	1.87674e+06	2.07604e+06	2.09164e+06
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	GSTAPVGGGSFPNITPR	GSTAPVGGGSFPNITPR	3	GSTAPVGGGSFPNITPR3	246919	311260	263637
P16036	P16036	S25A3_RAT	Slc25a3	Solute carrier family 25 member 3	1	GSTASQVLQR	GSTASQVLQR	2	GSTASQVLQR2	566584	511155	431082
Q6Q0N1	Q6Q0N1	CNDP2_RAT	Cndp2	Cytosolic non-specific dipeptidase	1	GSTDDKGPVAGWMNALEAYQK	GSTDDKGPVAGWMNALEAYQK	3	GSTDDKGPVAGWMNALEAYQK3	5933.95	8947.23	9656.86
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	GSTDNLMDDIER	GSTDNLMDDIER	2	GSTDNLMDDIER2	388868	337759	317956
P11730	P11730	KCC2G_RAT	Camk2g	Calcium/calmodulin-dependent protein kinase type II subunit gamma	1	GSTESCNTTTEDEDLK	GSTESC(UniMod:4)NTTTEDEDLK	2	GSTESC(UniMod:4)NTTTEDEDLK2	3282.6	1326.8	
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	GSTGFGQDSILSLPGNVGHQDVK	GSTGFGQDSILSLPGNVGHQDVK	3	GSTGFGQDSILSLPGNVGHQDVK3	68897.9	59473	81837
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	GSTLTSPCQDFGK	GSTLTSPC(UniMod:4)QDFGK	2	GSTLTSPC(UniMod:4)QDFGK2	5.31377e+06	6.10349e+06	5.67887e+06
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	GSTLTSPCQDFGKR	GSTLTSPC(UniMod:4)QDFGKR	2	GSTLTSPC(UniMod:4)QDFGKR2	86892.1	100251	81876
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	GSTLTSPCQDFGKR	GSTLTSPC(UniMod:4)QDFGKR	3	GSTLTSPC(UniMod:4)QDFGKR3	511102	602045	495953
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	GSTMEEELENITAK	GSTMEEELENITAK	2	GSTMEEELENITAK2	54726.4	60034.1	28376.4
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	GSTMEEELENITAK	GSTMEEELENITAK	3	GSTMEEELENITAK3	5626.63	8068.82	
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	GSTNLGVNQAGFTLHSAIYAARPDAK	GSTNLGVNQAGFTLHSAIYAARPDAK	3	GSTNLGVNQAGFTLHSAIYAARPDAK3	30511.8	24048.8	28237.9
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	GSTNLGVNQAGFTLHSAIYAARPDAK	GSTNLGVNQAGFTLHSAIYAARPDAK	4	GSTNLGVNQAGFTLHSAIYAARPDAK4	108522	114065	114203
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	GSTPTQISEIIIK	GSTPTQISEIIIK	2	GSTPTQISEIIIK2	18406.1	8062.6	17592.2
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GSTSHNLLYK	GSTSHNLLYK	2	GSTSHNLLYK2	248533	291912	258540
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	GSTVSLQPSPVTVHIDHLVVER	GSTVSLQPSPVTVHIDHLVVER	3	GSTVSLQPSPVTVHIDHLVVER3		11389	14223.1
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	GSTVSLQPSPVTVHIDHLVVER	GSTVSLQPSPVTVHIDHLVVER	4	GSTVSLQPSPVTVHIDHLVVER4	32968	34436.9	46429.2
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	GSVAEAEDCYNTALR	GSVAEAEDC(UniMod:4)YNTALR	2	GSVAEAEDC(UniMod:4)YNTALR2	1708.74	3401.92	3611.03
F1M7P8	F1M7P8	F1M7P8_RAT	Spryd3	SPRY domain containing 3	1	GSVAYHADDGK	GSVAYHADDGK	2	GSVAYHADDGK2			14482.2
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	GSVAYVPQQAWIQNDSLR	GSVAYVPQQAWIQNDSLR	3	GSVAYVPQQAWIQNDSLR3	11573.9	19768.3	17886.4
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	GSVDIDDNGYPDLIVGAYGASK	GSVDIDDNGYPDLIVGAYGASK	3	GSVDIDDNGYPDLIVGAYGASK3	811032	681474	888621
Q8K4Y7	Q8K4Y7	CANT1_RAT	Cant1	Soluble calcium-activated nucleotidase 1	1	GSVEHENWVSSYNALR	GSVEHENWVSSYNALR	3	GSVEHENWVSSYNALR3	17159.1	12293	9861.23
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	GSVFNTWK	GSVFNTWK	2	GSVFNTWK2	583460	639456	614741
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	GSVFNTWKPMWVVLLEDGIEFYKK	GSVFNTWKPMWVVLLEDGIEFYKK	4	GSVFNTWKPMWVVLLEDGIEFYKK4			7287.55
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	GSVFSSPSASGTPNK	GSVFSSPSASGTPNK	2	GSVFSSPSASGTPNK2	911519	799390	763251
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	GSVFSSPSASGTPNKETAGLK	GSVFSSPSASGTPNKETAGLK	3	GSVFSSPSASGTPNKETAGLK3	543935	596544	588694
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	GSVGSVSLSSK	GSVGSVSLSSK	2	GSVGSVSLSSK2	23251.9	29223	20882.8
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	GSVHFGLVR	GSVHFGLVR	2	GSVHFGLVR2	81889.6	66496.8	72117.5
Q5M7T7	Q5M7T7	Q5M7T7_RAT	Pla2g7	Phospholipase A2 group VII	1	GSVHQNFADGTFVTGK	GSVHQNFADGTFVTGK	2	GSVHQNFADGTFVTGK2	8448.88	7887.24	3063.25
Q5M7T7	Q5M7T7	Q5M7T7_RAT	Pla2g7	Phospholipase A2 group VII	1	GSVHQNFADGTFVTGK	GSVHQNFADGTFVTGK	3	GSVHQNFADGTFVTGK3	78443.3	94565.2	115714
Q5FWU0	Q5FWU0	Q5FWU0_RAT	Wasf2	Wiskott-Aldrich syndrome protein family member	1	GSVLAGPK	GSVLAGPK	1	GSVLAGPK1	3062.03		970.219
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	GSVLEPEGTVEIK	GSVLEPEGTVEIK	2	GSVLEPEGTVEIK2	15036.3	22973.3	17803.5
Q5XFW6	Q5XFW6	WDR6_RAT	Wdr6	WD repeat-containing protein 6	1	GSVLLFPARPCLFK	GSVLLFPARPC(UniMod:4)LFK	3	GSVLLFPARPC(UniMod:4)LFK3	9773.64	14229.2	14684.5
P11915	P11915	SCP2_RAT	Scp2	Sterol carrier protein 2	1	GSVLPDSDK	GSVLPDSDK	2	GSVLPDSDK2	44183.6	48754.8	43733.7
P11915	P11915	SCP2_RAT	Scp2	Sterol carrier protein 2	1	GSVLPDSDKK	GSVLPDSDKK	2	GSVLPDSDKK2	38359.1	38153.3	35531.7
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	GSVNELTQK	GSVNELTQK	2	GSVNELTQK2	34296.4	27184.4	35807.7
Q75Q40	Q75Q40	TOM40_RAT	Tomm40	Mitochondrial import receptor subunit TOM40 homolog	1	GSVNSNWIVGATLEK	GSVNSNWIVGATLEK	2	GSVNSNWIVGATLEK2	21134.7	17747.4	12676.8
B2GV55	B2GV55	B2GV55_RAT	Ube2q1	Ubiquitin conjugating enzyme E2 Q1	1	GSVPGDPVR	GSVPGDPVR	2	GSVPGDPVR2	60834.7	58330.4	64997
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	GSVPVFWSQVGYR	GSVPVFWSQVGYR	2	GSVPVFWSQVGYR2	149540	137680	92444.8
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	GSVPVFWSQVGYR	GSVPVFWSQVGYR	3	GSVPVFWSQVGYR3	5106	5012.43	2518.57
M0R7S5	M0R7S5	M0R7S5_RAT	Plin4	Perilipin 4	1	GSVQTGLDTSK	GSVQTGLDTSK	2	GSVQTGLDTSK2	6118.32	6299.13	6188.47
P84850	P84850	D2HDH_RAT	D2hgdh	D-2-hydroxyglutarate dehydrogenase, mitochondrial	1	GSVSAEHGLGFK	GSVSAEHGLGFK	2	GSVSAEHGLGFK2	3160.44		
P84850	P84850	D2HDH_RAT	D2hgdh	D-2-hydroxyglutarate dehydrogenase, mitochondrial	1	GSVSAEHGLGFK	GSVSAEHGLGFK	3	GSVSAEHGLGFK3	23856	4612.55	17996.6
F7FNG5	F7FNG5	F7FNG5_RAT	Cul4a	Cullin 4A	1	GSVSALMGR	GSVSALMGR	2	GSVSALMGR2	13828.8	12897.3	11076.1
A0A0G2K7G2	A0A0G2K7G2	A0A0G2K7G2_RAT	Agfg2	ArfGAP with FG repeats 2	1	GSVSATPVQGSVPEGKPIR	GSVSATPVQGSVPEGKPIR	3	GSVSATPVQGSVPEGKPIR3	4581.21	4730.94	6659.24
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	GSVSDEEMMELR	GSVSDEEMMELR	2	GSVSDEEMMELR2	10611.9	6164.79	14218.8
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	GSVTISLQALQDTR	GSVTISLQALQDTR	2	GSVTISLQALQDTR2	4681.37	3887.32	3940.55
F1LP90	A0A8I5ZLV4;F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	0	GSVVNVNPTNTR	GSVVNVNPTNTR	2	GSVVNVNPTNTR2	10725.7	12071.4	12954.4
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	GSVYLRNPTSGPCSPK	GSVYLRNPTSGPC(UniMod:4)SPK	3	GSVYLRNPTSGPC(UniMod:4)SPK3	123968	180738	180607
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	GSVYLRNPTSGPCSPKK	GSVYLRNPTSGPC(UniMod:4)SPKK	3	GSVYLRNPTSGPC(UniMod:4)SPKK3	6114.62	2676.96	9566.26
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	GSVYLRNPTSGPCSPKK	GSVYLRNPTSGPC(UniMod:4)SPKK	4	GSVYLRNPTSGPC(UniMod:4)SPKK4	13872.8	16710.5	21839.7
A0A0G2JST1	A0A0G2JST1	A0A0G2JST1_RAT	Adgrg6	Adhesion G protein-coupled receptor G6	1	GSVYNFR	GSVYNFR	2	GSVYNFR2	23323.9	20343.9	30897
Q9JHY1	Q9JHY1	JAM1_RAT	F11r	Junctional adhesion molecule A	1	GSVYSPQTAVQVPENDSVK	GSVYSPQTAVQVPENDSVK	3	GSVYSPQTAVQVPENDSVK3	227032	212401	256404
P23785	P23785	GRN_RAT	Grn	Progranulin	1	GSWACCQLPHAVCCEDR	GSWAC(UniMod:4)C(UniMod:4)QLPHAVC(UniMod:4)C(UniMod:4)EDR	3	GSWAC(UniMod:4)C(UniMod:4)QLPHAVC(UniMod:4)C(UniMod:4)EDR3	65172.2	67842.2	55161
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	GSWACSIFDLK	GSWAC(UniMod:4)SIFDLK	2	GSWAC(UniMod:4)SIFDLK2	23179.4	20305.6	20320.3
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	GSWDDSVEGHNELSISTLTADK	GSWDDSVEGHNELSISTLTADK	3	GSWDDSVEGHNELSISTLTADK3	7923.63	4112.85	3918.98
A0A8I5ZQU7	A0A8I5ZQU7	A0A8I5ZQU7_RAT	Casp7	Caspase 7	1	GSWFVQALCSILNEHGK	GSWFVQALC(UniMod:4)SILNEHGK	3	GSWFVQALC(UniMod:4)SILNEHGK3	1609.64		
A0A8I6ASK6	A0A8I6ASK6	A0A8I6ASK6_RAT	Fcrl1	Fc receptor-like 1	1	GSWGSVCDDSWGEK	GSWGSVC(UniMod:4)DDSWGEK	2	GSWGSVC(UniMod:4)DDSWGEK2	10732.2	624113	751126
A0A8I6ASK6	A0A8I6ASK6	A0A8I6ASK6_RAT	Fcrl1	Fc receptor-like 1	1	GSWGSVCDDSWGEKEDQVVCK	GSWGSVC(UniMod:4)DDSWGEKEDQVVC(UniMod:4)K	3	GSWGSVC(UniMod:4)DDSWGEKEDQVVC(UniMod:4)K3	639599	618567	665179
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	GSWGTVCDNSWDINDANVVCR	GSWGTVC(UniMod:4)DNSWDINDANVVC(UniMod:4)R	3	GSWGTVC(UniMod:4)DNSWDINDANVVC(UniMod:4)R3	447335	634757	470684
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	GSWSSPAPLCK	GSWSSPAPLC(UniMod:4)K	2	GSWSSPAPLC(UniMod:4)K2	102730	81063.3	102777
F1M386	F1M386	RPGF2_RAT	Rapgef2	Rap guanine nucleotide exchange factor 2	1	GSWTSCSSGSHDNIQTIQHQR	GSWTSC(UniMod:4)SSGSHDNIQTIQHQR	4	GSWTSC(UniMod:4)SSGSHDNIQTIQHQR4		4075.15	7255.36
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	GSWYSMR	GSWYSMR	1	GSWYSMR1	34526.1	39851.4	36504.4
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	GSWYSMR	GSWYSMR	2	GSWYSMR2	234400	216317	244692
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	GSYEGDEEEMDHQEEGK	GSYEGDEEEMDHQEEGK	3	GSYEGDEEEMDHQEEGK3	4632.27	7592.71	5749.67
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	GSYEIIPANGENTDIDK	GSYEIIPANGENTDIDK	2	GSYEIIPANGENTDIDK2	793459	797410	795180
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	GSYEIIPANGENTDIDK	GSYEIIPANGENTDIDK	3	GSYEIIPANGENTDIDK3	77488	87389.2	62080.7
P61980	A0A8I5ZZG4;P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	GSYGDLGGPIITTQVTIPK	GSYGDLGGPIITTQVTIPK	2	GSYGDLGGPIITTQVTIPK2	34730.3	41872.7	32190.6
P61980	A0A8I5ZZG4;P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	GSYGDLGGPIITTQVTIPK	GSYGDLGGPIITTQVTIPK	3	GSYGDLGGPIITTQVTIPK3	20134.9	18011.2	19014.2
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	GSYGYIK	GSYGYIK	1	GSYGYIK1	43516.1	56959.5	50006.5
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	GSYGYIK	GSYGYIK	2	GSYGYIK2	1.41444e+06	1.59888e+06	1.70888e+06
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	GSYHCICK	GSYHC(UniMod:4)IC(UniMod:4)K	2	GSYHC(UniMod:4)IC(UniMod:4)K2			2495
A0A8I5ZXJ1	A0A8I5ZXJ1	A0A8I5ZXJ1_RAT	Ermap	Erythroblast membrane associated protein (Scianna blood group)	1	GSYILQISNVR	GSYILQISNVR	2	GSYILQISNVR2	9751.25		
P01015	P01015	ANGT_RAT	Agt	Angiotensinogen	1	GSYNLQDLLAQAK	GSYNLQDLLAQAK	2	GSYNLQDLLAQAK2	262658	230664	230781
P01015	P01015	ANGT_RAT	Agt	Angiotensinogen	1	GSYNLQDLLAQAK	GSYNLQDLLAQAK	3	GSYNLQDLLAQAK3	10142.8	9867.51	19993.7
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	GSYNNIVVHVK	GSYNNIVVHVK	2	GSYNNIVVHVK2	2468.05	915.813	1488.86
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	GSYNNIVVHVK	GSYNNIVVHVK	3	GSYNNIVVHVK3	10105.7	7657.34	11313.4
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	GSYPVTGLAFR	GSYPVTGLAFR	2	GSYPVTGLAFR2	14062.5	11919.6	26161.4
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	GSYPVWEDFINK	GSYPVWEDFINK	2	GSYPVWEDFINK2	141248	162353	143122
G3V6Q3	A0A8I5Y6K0;G3V6Q3	G3V6Q3_RAT	Wdr13	Uncharacterized protein	0	GSYQLQAQMNR	GSYQLQAQMNR	2	GSYQLQAQMNR2	5362.23	4619.26	8217.02
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	GSYSLVEAQK	GSYSLVEAQK	2	GSYSLVEAQK2	121716	117474	118783
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	GSYTYFAPSNEAWDNLDSDIRR	GSYTYFAPSNEAWDNLDSDIRR	3	GSYTYFAPSNEAWDNLDSDIRR3	63562.3	74953	61739.7
Q63413	Q5U216;Q63413	DX39B_RAT	Ddx39b	Spliceosome RNA helicase Ddx39b	0	GSYVSIHSSGFR	GSYVSIHSSGFR	3	GSYVSIHSSGFR3	12267.6	6765.67	7793.44
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	GSYYCVVSAWTR	GSYYC(UniMod:4)VVSAWTR	2	GSYYC(UniMod:4)VVSAWTR2	1435.97		3314
F1M5J3	F1M5J3	F1M5J3_RAT	Nipa1	NIPA magnesium transporter 1	1	GTAAAAAAAGEGAR	GTAAAAAAAGEGAR	2	GTAAAAAAAGEGAR2	8012.05	5828.44	2826.72
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	GTAACADVR	GTAAC(UniMod:4)ADVR	2	GTAAC(UniMod:4)ADVR2	15666.5	10038	13714.1
Q62991	Q62991	SCFD1_RAT	Scfd1	Sec1 family domain-containing protein 1	1	GTAAEMVAVK	GTAAEMVAVK	2	GTAAEMVAVK2	44537.5	39613.1	38380.3
Q6AZ45	Q6AZ45	Q6AZ45_RAT	Fcer2	Fc fragment of IgE receptor II	1	GTACNVCPK	GTAC(UniMod:4)NVC(UniMod:4)PK	2	GTAC(UniMod:4)NVC(UniMod:4)PK2	4333.73	7615.27	13109.3
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	GTADTFLNR	GTADTFLNR	2	GTADTFLNR2	95806.7	83442.5	94916.1
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	GTAEGAVDAMLVHGQDAITVSNGGR	GTAEGAVDAMLVHGQDAITVSNGGR	3	GTAEGAVDAMLVHGQDAITVSNGGR3	26260.2	19078.4	19240.8
Q6AYT7	Q6AYT7	ABD12_RAT	Abhd12	Lysophosphatidylserine lipase ABHD12	1	GTAEPHSASDAGMK	GTAEPHSASDAGMK	3	GTAEPHSASDAGMK3			7686.45
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	GTAEPQGQK	GTAEPQGQK	2	GTAEPQGQK2			8624.43
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	GTAEQDMSEEAEEDQHR	GTAEQDMSEEAEEDQHR	3	GTAEQDMSEEAEEDQHR3		2407.54	4059.39
P12711	P12711	ADHX_RAT	Adh5	Alcohol dehydrogenase class-3	1	GTAFGGWK	GTAFGGWK	2	GTAFGGWK2		15354.8	14634.3
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	GTAFIIR	GTAFIIR	2	GTAFIIR2	40278.8	35265	34184.3
Q8R492	Q8R492	Q8R492_RAT	Fap	Fibroblast activation protein, alpha	1	GTAFQGDK	GTAFQGDK	2	GTAFQGDK2		10796.5	
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	GTAGNALMEGASQLVGENR	GTAGNALMEGASQLVGENR	2	GTAGNALMEGASQLVGENR2	17157	11935.8	11929.5
P21708	P21708	MK03_RAT	Mapk3	Mitogen-activated protein kinase 3	1	GTAGVVPVVPGEVEVVK	GTAGVVPVVPGEVEVVK	2	GTAGVVPVVPGEVEVVK2	21195.5	17963.3	27564.9
Q920E0	Q920E0	PAR4_RAT	F2rl3	Proteinase-activated receptor 4	1	GTAICSSTLL	GTAIC(UniMod:4)SSTLL	2	GTAIC(UniMod:4)SSTLL2	37228.8	29958.5	28177.4
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	GTAKPLQPSAPR	GTAKPLQPSAPR	2	GTAKPLQPSAPR2	28973.7	34471.6	28008.1
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	GTAKPLQPSAPR	GTAKPLQPSAPR	3	GTAKPLQPSAPR3	155581	186111	188174
M0RBH1	M0RBH1	M0RBH1_RAT	Apol2	Apolipoprotein L, 2	1	GTALAMSR	GTALAMSR	2	GTALAMSR2	12248.7	3671.21	8299.26
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	GTALESLIMDITAPDSQAK	GTALESLIMDITAPDSQAK	3	GTALESLIMDITAPDSQAK3	12558.9	8301.94	11216.2
Q6V9V9	Q6V9V9	Q6V9V9_RAT	Stk25	Serine/threonine kinase 25	1	GTALHSSQKPAEPIK	GTALHSSQKPAEPIK	3	GTALHSSQKPAEPIK3	10169.1	6344.06	5115.42
Q6V9V9	Q6V9V9	Q6V9V9_RAT	Stk25	Serine/threonine kinase 25	1	GTALHSSQKPAEPIK	GTALHSSQKPAEPIK	4	GTALHSSQKPAEPIK4	10440.6	16314	5814.65
O35397	O35397	CASP6_RAT	Casp6	Caspase-6	1	GTALIFNHER	GTALIFNHER	3	GTALIFNHER3	14599.6	11957.2	21739.5
Q62713;Q9Z1F1	Q62713;Q9Z1F1	DEF3A_RAT;DEF3B_RAT		Neutrophil antibiotic peptide NP-3A	0	GTALQDAAVK	GTALQDAAVK	2	GTALQDAAVK2	25286.5	14541.2	19732.3
Q62715;Q62716	Q4JEI3;Q62716;Q62715	DEF1_RAT;DEF2_RAT	Defa	Neutrophil antibiotic peptide NP-2	0	GTALQDADVK	GTALQDADVK	2	GTALQDADVK2	16839.5	13795.8	18686.3
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	GTALSNGQGAR	GTALSNGQGAR	2	GTALSNGQGAR2	7965.6	13647.2	4275.48
P97521	P97521	MCAT_RAT	Slc25a20	Mitochondrial carnitine/acylcarnitine carrier protein	1	GTALTLMR	GTALTLMR	2	GTALTLMR2	271615	285319	290552
A0A8I6G251	A0A8I6G251	A0A8I6G251_RAT	Tnpo3	Transportin 3	1	GTALVLAR	GTALVLAR	2	GTALVLAR2	20561.4	23169.1	21079.1
Q499S6	Q499S6	Q499S6_RAT	Ctsf	Cathepsin F	1	GTAQYGITK	GTAQYGITK	2	GTAQYGITK2	4978.83	7572.99	3584.01
Q9WTS8	Q9WTS8	FCN1_RAT	Fcn1	Ficolin-1	1	GTASPLGQK	GTASPLGQK	2	GTASPLGQK2	168772	168445	175355
Q5U220	Q5U220	TM254_RAT	Tmem254	Transmembrane protein 254	1	GTATGASYFQR	GTATGASYFQR	2	GTATGASYFQR2	13984.2	18643.7	14627.6
P11507	P18596;P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	0	GTAVAICR	GTAVAIC(UniMod:4)R	2	GTAVAIC(UniMod:4)R2	809315	932441	877046
A0A8I6ASK1	A0A8I6ASK1	A0A8I6ASK1_RAT	P4ha2	procollagen-proline 4-dioxygenase	1	GTAVFWYNLLR	GTAVFWYNLLR	2	GTAVFWYNLLR2	14295.4	14633.6	16320.4
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	GTAVGEVFASDR	GTAVGEVFASDR	2	GTAVGEVFASDR2	12373.2	8533.23	9490.21
Q9Z0V6	Q9Z0V6	PRDX3_RAT	Prdx3	Thioredoxin-dependent peroxide reductase, mitochondrial	1	GTAVVNGEFK	GTAVVNGEFK	2	GTAVVNGEFK2	308131	297779	344354
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	GTCAFSILFK	GTC(UniMod:4)AFSILFK	2	GTC(UniMod:4)AFSILFK2	6788.73		2347.92
Q5XI23	Q5XI23	Q5XI23_RAT	Mkrn2	RING-type E3 ubiquitin transferase	1	GTCPFGSK	GTC(UniMod:4)PFGSK	2	GTC(UniMod:4)PFGSK2	9510.09	6931.62	6534.65
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	GTCSYLTK	GTC(UniMod:4)SYLTK	2	GTC(UniMod:4)SYLTK2	23215.2	25537	25667.1
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	GTCVEGTIPK	GTC(UniMod:4)VEGTIPK	2	GTC(UniMod:4)VEGTIPK2	34858.7	37028.7	29816.6
A0A8I5ZNG4	A0A8I5ZNG4	A0A8I5ZNG4_RAT	Rictor	RPTOR independent companion of MTOR, complex 2	1	GTCVYVLGLIAK	GTC(UniMod:4)VYVLGLIAK	2	GTC(UniMod:4)VYVLGLIAK2	1359.61	2173.84	
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	GTCWLNIQDNR	GTC(UniMod:4)WLNIQDNR	2	GTC(UniMod:4)WLNIQDNR2	7986.59	5334.48	4318.18
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	GTCWQTVIDGR	GTC(UniMod:4)WQTVIDGR	2	GTC(UniMod:4)WQTVIDGR2	45084.3	64816.7	69491.8
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	GTDDDRPSWR	GTDDDRPSWR	3	GTDDDRPSWR3	52880	40710.8	38358
Q9QYF3	Q9QYF3	MYO5A_RAT	Myo5a	Unconventional myosin-Va	1	GTDDTWAQK	GTDDTWAQK	2	GTDDTWAQK2	4529.31	3815.52	
P80067	P80067	CATC_RAT	Ctsc	Dipeptidyl peptidase 1	1	GTDECAIESIAMAAIPIPK	GTDEC(UniMod:4)AIESIAMAAIPIPK	3	GTDEC(UniMod:4)AIESIAMAAIPIPK3	2222.83	3003.38	4286.32
A0A096MJT6	A0A096MJT6	A0A096MJT6_RAT	Bltp1	Similar to RIKEN cDNA D630029K19	1	GTDFNYGPWADR	GTDFNYGPWADR	2	GTDFNYGPWADR2	5083.19		4902.77
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	GTDFQLNQLQGK	GTDFQLNQLQGK	2	GTDFQLNQLQGK2	833859	789310	833043
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	GTDFQLNQLQGK	GTDFQLNQLQGK	3	GTDFQLNQLQGK3	1683.65	2613.81	838.698
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	GTDFQLNQLQGKK	GTDFQLNQLQGKK	3	GTDFQLNQLQGKK3	16622.4	35292.1	35692.1
Q09073	A0A8I6A075;Q09073	ADT2_RAT	Slc25a5	ADP/ATP translocase 2	0	GTDIMYTGTLDCWR	GTDIMYTGTLDC(UniMod:4)WR	2	GTDIMYTGTLDC(UniMod:4)WR2	512792	469528	504501
Q09073	A0A8I6A075;Q09073	ADT2_RAT	Slc25a5	ADP/ATP translocase 2	0	GTDIMYTGTLDCWR	GTDIMYTGTLDC(UniMod:4)WR	3	GTDIMYTGTLDC(UniMod:4)WR3	19064.3	24761.9	23178.3
Q09073	A0A8I6A075;Q09073	ADT2_RAT	Slc25a5	ADP/ATP translocase 2	0	GTDIMYTGTLDCWRK	GTDIMYTGTLDC(UniMod:4)WRK	2	GTDIMYTGTLDC(UniMod:4)WRK2	4894.12	3841.28	5747.03
Q09073	A0A8I6A075;Q09073	ADT2_RAT	Slc25a5	ADP/ATP translocase 2	0	GTDIMYTGTLDCWRK	GTDIMYTGTLDC(UniMod:4)WRK	3	GTDIMYTGTLDC(UniMod:4)WRK3	35921.1	57869.8	30151.6
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	GTDKEQDVDVSSHSYTINGLK	GTDKEQDVDVSSHSYTINGLK	3	GTDKEQDVDVSSHSYTINGLK3	5869.31	3471.83	3700.26
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	GTDKEQDVDVSSHSYTINGLK	GTDKEQDVDVSSHSYTINGLK	4	GTDKEQDVDVSSHSYTINGLK4	21834	10514.7	18686.8
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	GTDKEQDVDVSSHSYTINGLKK	GTDKEQDVDVSSHSYTINGLKK	4	GTDKEQDVDVSSHSYTINGLKK4	12591.2	4210.73	14316.4
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	GTDLEALVAIGK	GTDLEALVAIGK	2	GTDLEALVAIGK2	5990.52	3416.37	5305.47
Q80Z29	Q80Z29	NAMPT_RAT	Nampt	Nicotinamide phosphoribosyltransferase	1	GTDTVAGIALIK	GTDTVAGIALIK	2	GTDTVAGIALIK2	16082.5	12916.9	19480.9
P07150	P07150	ANXA1_RAT	Anxa1	Annexin A1	1	GTDVNVFNTILTTR	GTDVNVFNTILTTR	2	GTDVNVFNTILTTR2	3011.59	13467	5919.66
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	GTDYQLSK	GTDYQLSK	2	GTDYQLSK2	12266.5	11780.6	8179.81
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	GTDYSILEIHTGR	GTDYSILEIHTGR	3	GTDYSILEIHTGR3	14024	17878.9	20605.1
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	GTEAAGATVVEAVPMSLPPQVK	GTEAAGATVVEAVPMSLPPQVK	3	GTEAAGATVVEAVPMSLPPQVK3	436963	400493	550758
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	GTEAAGATVVEAVPMSLPPQVK	GTEAAGATVVEAVPMSLPPQVK	4	GTEAAGATVVEAVPMSLPPQVK4	6986.57	10036.8	16076.7
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	GTEAHGARPEPDIEVR	GTEAHGARPEPDIEVR	3	GTEAHGARPEPDIEVR3	16681.2	15555.6	14057.6
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	GTEAHGARPEPDIEVR	GTEAHGARPEPDIEVR	4	GTEAHGARPEPDIEVR4	48091.7	46057.8	52291.5
P04692	P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	1	GTEDELDK	GTEDELDK	1	GTEDELDK1	2308.14		2858.55
P04692	P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	1	GTEDELDK	GTEDELDK	2	GTEDELDK2	440584	402849	390615
P58775	P58775	TPM2_RAT	Tpm2	Tropomyosin beta chain	1	GTEDEVEK	GTEDEVEK	1	GTEDEVEK1	1036.5		24000.9
P58775	P58775	TPM2_RAT	Tpm2	Tropomyosin beta chain	1	GTEDEVEK	GTEDEVEK	2	GTEDEVEK2			112946
Q7TPJ0	Q7TPJ0	SSRA_RAT	Ssr1	Translocon-associated protein subunit alpha	1	GTEDFIVESLDASFR	GTEDFIVESLDASFR	2	GTEDFIVESLDASFR2	122256	94663.7	117829
Q7TPJ0	Q7TPJ0	SSRA_RAT	Ssr1	Translocon-associated protein subunit alpha	1	GTEDFIVESLDASFR	GTEDFIVESLDASFR	3	GTEDFIVESLDASFR3	23789.2	19532.5	26038.7
P60123	P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	1	GTEDITSPHGIPLDLLDR	GTEDITSPHGIPLDLLDR	2	GTEDITSPHGIPLDLLDR2	1266.2	3314.46	
P60123	P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	1	GTEDITSPHGIPLDLLDR	GTEDITSPHGIPLDLLDR	3	GTEDITSPHGIPLDLLDR3	42324.7	42669.9	55201.7
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	GTEELYAIK	GTEELYAIK	2	GTEELYAIK2	223837	229337	243893
Q6XFR6	Q6XFR6	GLPC_RAT	Gypc	Glycophorin-C	1	GTEFAESADAALQSDPALQDAGDTSK	GTEFAESADAALQSDPALQDAGDTSK	3	GTEFAESADAALQSDPALQDAGDTSK3	34369.7	26200.1	38618.4
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	GTEGLSASESLMLK	GTEGLSASESLMLK	2	GTEGLSASESLMLK2	6923.89	5245.87	
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	GTEGVLGLQR	GTEGVLGLQR	2	GTEGVLGLQR2	36119.8	25300.4	30390.4
A0A0G2K6R0	A0A0G2K6R0	A0A0G2K6R0_RAT	Tnrc6b	Trinucleotide repeat containing adaptor 6B	1	GTEGWESAATQTK	GTEGWESAATQTK	2	GTEGWESAATQTK2	5248.49	5755.01	3704.49
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	GTEHSGSTVPSILNR	GTEHSGSTVPSILNR	2	GTEHSGSTVPSILNR2	4227.96	5881.67	4077.14
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	GTEHSGSTVPSILNR	GTEHSGSTVPSILNR	3	GTEHSGSTVPSILNR3	85435	83914.6	114042
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	GTEITHAVVIK	GTEITHAVVIK	2	GTEITHAVVIK2	9822.94	8986.67	11544.6
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	GTEITHAVVIK	GTEITHAVVIK	3	GTEITHAVVIK3	32805.3	41910.7	14787
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	GTEITHAVVIKK	GTEITHAVVIKK	3	GTEITHAVVIKK3	25424.1	26591.3	17925.4
Q9QZG1	Q9QZG1	S22AN_RAT	Slc22a23	Solute carrier family 22 member 23	1	GTELAGATVTGR	GTELAGATVTGR	2	GTELAGATVTGR2	8013.67	4511.81	7318.26
P55213	P55213	CASP3_RAT	Casp3	Caspase-3	1	GTELDCGIETDSGTDDDMACQK	GTELDC(UniMod:4)GIETDSGTDDDMAC(UniMod:4)QK	3	GTELDC(UniMod:4)GIETDSGTDDDMAC(UniMod:4)QK3	3977.55	2642.75	1326.34
F1M1H0	F1M1H0	F1M1H0_RAT	Dera	deoxyribose-phosphate aldolase	1	GTELDLSWVSR	GTELDLSWVSR	2	GTELDLSWVSR2	13787.6	11747.7	5729.38
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	GTELLLQQER	GTELLLQQER	2	GTELLLQQER2	41832.2	34311.5	51691.6
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	GTENEDAEREYQNDNQASWVHR	GTENEDAEREYQNDNQASWVHR	3	GTENEDAEREYQNDNQASWVHR3	7577.69	7887.92	
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	GTENEDAEREYQNDNQASWVHR	GTENEDAEREYQNDNQASWVHR	4	GTENEDAEREYQNDNQASWVHR4	34377.8	33614.2	25187.4
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	GTEPIVVDPFDPR	GTEPIVVDPFDPR	2	GTEPIVVDPFDPR2	34489.2	57036.4	52046.2
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	GTEPSALPFVDPNARPLAPEVSIK	GTEPSALPFVDPNARPLAPEVSIK	3	GTEPSALPFVDPNARPLAPEVSIK3	74125.5	113454	112568
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	GTESEISSEGSGGPELEDK	GTESEISSEGSGGPELEDK	2	GTESEISSEGSGGPELEDK2	14187.9	11048.4	9079.16
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	GTESEISSEGSGGPELEDK	GTESEISSEGSGGPELEDK	3	GTESEISSEGSGGPELEDK3		1378.66	1034
D3ZLK1	D3ZLK1	D3ZLK1_RAT	Gcsam	Germinal center-associated, signaling and motility	1	GTETEYSVLR	GTETEYSVLR	2	GTETEYSVLR2	194410	188550	198731
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	GTETTLALPMASDLELYDVTENSMR	GTETTLALPMASDLELYDVTENSMR	3	GTETTLALPMASDLELYDVTENSMR3	6394.86	9313.64	12833.7
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	GTEVQVDDIKR	GTEVQVDDIKR	2	GTEVQVDDIKR2	5477.8	1629.48	1113.33
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	GTEVQVDDIKR	GTEVQVDDIKR	3	GTEVQVDDIKR3	35025.5	38126.9	47604.3
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	GTEVVSGTVSEITAYCMPPVIK	GTEVVSGTVSEITAYC(UniMod:4)MPPVIK	3	GTEVVSGTVSEITAYC(UniMod:4)MPPVIK3	481878	634939	732569
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	GTEVVSGTVSEITAYCMPPVIK	GTEVVSGTVSEITAYC(UniMod:4)MPPVIK	4	GTEVVSGTVSEITAYC(UniMod:4)MPPVIK4	37191.5	27530.9	54211.4
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	GTEYYDGK	GTEYYDGK	2	GTEYYDGK2	8271	10163.3	8317.43
P02091	P11517;P02091	HBB1_RAT	Hbb	Hemoglobin subunit beta-1	0	GTFAHLSELHCDK	GTFAHLSELHC(UniMod:4)DK	2	GTFAHLSELHC(UniMod:4)DK2	49331.4	51953.4	50961.6
P02091	P11517;P02091	HBB1_RAT	Hbb	Hemoglobin subunit beta-1	0	GTFAHLSELHCDK	GTFAHLSELHC(UniMod:4)DK	3	GTFAHLSELHC(UniMod:4)DK3	355822	349390	349483
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	GTFANIR	GTFANIR	2	GTFANIR2	25347.5	31384.1	45470.1
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	GTFDIYVK	GTFDIYVK	1	GTFDIYVK1	9415.67	9398.73	19102.4
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	GTFDIYVK	GTFDIYVK	2	GTFDIYVK2	801114	809047	790085
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	GTFDNAETK	GTFDNAETK	2	GTFDNAETK2	164695	227831	197382
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	GTFDNAETKK	GTFDNAETKK	2	GTFDNAETKK2	10834.8	15984	9797.15
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	GTFFPMGDEGASSQVGR	GTFFPMGDEGASSQVGR	2	GTFFPMGDEGASSQVGR2	63495.7	75406.5	52991
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	GTFGDMLDTPDPYVELFISTTPDSR	GTFGDMLDTPDPYVELFISTTPDSR	3	GTFGDMLDTPDPYVELFISTTPDSR3	6378.23	8941.15	11262.2
F7F1X7	F7F1X7;A0A8I6GBA9;Q5RK25	F7F1X7_RAT	Pmm2	Phosphomannomutase	0	GTFIEFR	GTFIEFR	2	GTFIEFR2	16093.6	12728	12365.9
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	GTFLLDLAETSLAGVANK	GTFLLDLAETSLAGVANK	2	GTFLLDLAETSLAGVANK2	3094.09	2683.2	3823.47
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	GTFLLDLAETSLAGVANK	GTFLLDLAETSLAGVANK	3	GTFLLDLAETSLAGVANK3	13296.1	12269.2	15817.7
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	GTFNDGFQIEVQGHTDELWGLATHPFK	GTFNDGFQIEVQGHTDELWGLATHPFK	4	GTFNDGFQIEVQGHTDELWGLATHPFK4	5661.94	3781.4	8166.44
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	GTFSDQELDAQSLDDEDDSMHHAVYPAVNR	GTFSDQELDAQSLDDEDDSMHHAVYPAVNR	4	GTFSDQELDAQSLDDEDDSMHHAVYPAVNR4	3842.34		13760.3
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	GTFSLVIR	GTFSLVIR	2	GTFSLVIR2	65786.6	65248.7	55972.8
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	GTFTSGLK	GTFTSGLK	2	GTFTSGLK2	130375	133481	157581
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	GTFVHSTWTCPMEVLR	GTFVHSTWTC(UniMod:4)PMEVLR	2	GTFVHSTWTC(UniMod:4)PMEVLR2	12113.3	7588.22	
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	GTFVHSTWTCPMEVLR	GTFVHSTWTC(UniMod:4)PMEVLR	3	GTFVHSTWTC(UniMod:4)PMEVLR3	81004.6	79266.2	84881.9
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	GTFYQGYLCFK	GTFYQGYLC(UniMod:4)FK	2	GTFYQGYLC(UniMod:4)FK2	12954.5	29009.5	15353.8
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	GTFYQGYR	GTFYQGYR	2	GTFYQGYR2	25546.3	37020.7	27238.6
P10716	P10716	CLC4F_RAT	Clec4f	C-type lectin domain family 4 member F	1	GTGALASETQALR	GTGALASETQALR	2	GTGALASETQALR2	27041.1	10671.2	18444.7
P15865	M0R7B4;D3ZBN0;P15865;A0A0G2K654;P06349	H14_RAT	H1-4	Histone H1.4	0	GTGASGSFK	GTGASGSFK	2	GTGASGSFK2	6136.86	7377.47	
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	GTGDCSDEEVDGK	GTGDC(UniMod:4)SDEEVDGK	2	GTGDC(UniMod:4)SDEEVDGK2	13834.6	16652.9	14717.3
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	GTGDCSDEEVDGKADGADAK	GTGDC(UniMod:4)SDEEVDGKADGADAK	3	GTGDC(UniMod:4)SDEEVDGKADGADAK3	5524.17	4201.78	
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	GTGFGTGSTASGWDVEQALTK	GTGFGTGSTASGWDVEQALTK	3	GTGFGTGSTASGWDVEQALTK3	5618.15	8389.04	7930.51
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	GTGFQLNQLQGK	GTGFQLNQLQGK	2	GTGFQLNQLQGK2	56717.8	45292	61210.1
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	GTGGGLMEEMNAMLAR	GTGGGLMEEMNAMLAR	2	GTGGGLMEEMNAMLAR2	329438	225161	221141
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	GTGGGLMEEMNAMLAR	GTGGGLMEEMNAMLAR	3	GTGGGLMEEMNAMLAR3	18499.9	11247.3	16479.2
Q66HR0	Q66HR0	S12A9_RAT	Slc12a9	Solute carrier family 12 member 9	1	GTGGGPGGPEGR	GTGGGPGGPEGR	2	GTGGGPGGPEGR2			4678.98
P07335	P07335	KCRB_RAT	Ckb	Creatine kinase B-type	1	GTGGVDTAAVGGVFDVSNADR	GTGGVDTAAVGGVFDVSNADR	3	GTGGVDTAAVGGVFDVSNADR3	24722.3	19647.5	22407.4
P27952	A0A0G2K8H4;A0A0U1RVI9;D3ZIY7;D3ZT78;P27952;A0A8I5ZSA5;D3ZQW7	RS2_RAT	Rps2	Small ribosomal subunit protein uS5	0	GTGIVSAPVPK	GTGIVSAPVPK	2	GTGIVSAPVPK2	102145	108859	100798
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	GTGKPLEVNFAK	GTGKPLEVNFAK	3	GTGKPLEVNFAK3	18179	24342.4	20701.9
P61212	P61212	ARL1_RAT	Arl1	ADP-ribosylation factor-like protein 1	1	GTGLDEAMEWLVETLK	GTGLDEAMEWLVETLK	2	GTGLDEAMEWLVETLK2		14798.3	24674.6
P61212	P61212	ARL1_RAT	Arl1	ADP-ribosylation factor-like protein 1	1	GTGLDEAMEWLVETLK	GTGLDEAMEWLVETLK	3	GTGLDEAMEWLVETLK3	7508.28		
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	GTGLQPGEEELPDIAPPLVTPDEPK	GTGLQPGEEELPDIAPPLVTPDEPK	3	GTGLQPGEEELPDIAPPLVTPDEPK3	179548	181621	175993
A0A8I5ZZ89	A0A8I5ZZ89	A0A8I5ZZ89_RAT	Elp3	Elongator complex protein 3	1	GTGLYELWK	GTGLYELWK	2	GTGLYELWK2	4604.64	7715.82	4949.43
P63036	P63036	DNJA1_RAT	Dnaja1	DnaJ homolog subfamily A member 1	1	GTGMQIR	GTGMQIR	2	GTGMQIR2	111233	94557.9	115816
P06760	P06760	BGLR_RAT	Gusb	Beta-glucuronidase	1	GTGNEGQLK	GTGNEGQLK	2	GTGNEGQLK2			12347.1
Q62763	Q62763	KC1G3_RAT	Csnk1g3	Casein kinase I isoform gamma-3	1	GTGSSSSGVLMVGPNFR	GTGSSSSGVLMVGPNFR	2	GTGSSSSGVLMVGPNFR2	26855.8	35335.6	25173.8
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	GTGSVVGELMYK	GTGSVVGELMYK	2	GTGSVVGELMYK2	63435	71036.6	58336.2
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	GTGTIIVAKPLDAEQK	GTGTIIVAKPLDAEQK	2	GTGTIIVAKPLDAEQK2	2741.08	1979.71	3842.4
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	GTGTIIVAKPLDAEQK	GTGTIIVAKPLDAEQK	3	GTGTIIVAKPLDAEQK3	36478.1	46890.6	46454.3
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	GTGWPYR	GTGWPYR	2	GTGWPYR2	117686	180567	141429
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	GTHAWASPSPAPLPPDLLLK	GTHAWASPSPAPLPPDLLLK	3	GTHAWASPSPAPLPPDLLLK3	7212.42	7226.31	6531.33
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	GTHERPDVETQK	GTHERPDVETQK	2	GTHERPDVETQK2			5393.11
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	GTHERPDVETQK	GTHERPDVETQK	3	GTHERPDVETQK3			5282.89
Q5U316	Q5U316	RAB35_RAT	Rab35	Ras-related protein Rab-35	1	GTHGVIVVYDVTSAESFVNVK	GTHGVIVVYDVTSAESFVNVK	3	GTHGVIVVYDVTSAESFVNVK3	15303.6	9896.13	16473.4
P14841	P14841	CYTC_RAT	Cst3	Cystatin-C	1	GTHTLTK	GTHTLTK	1	GTHTLTK1			2299.85
A0A8I5YC01	A0A8I5YC01	A0A8I5YC01_RAT	Gimap1	GTPase, IMAP family member 1	1	GTHYSNEVYELVQATR	GTHYSNEVYELVQATR	2	GTHYSNEVYELVQATR2	2292.07	1143.52	
A0A8I5YC01	A0A8I5YC01	A0A8I5YC01_RAT	Gimap1	GTPase, IMAP family member 1	1	GTHYSNEVYELVQATR	GTHYSNEVYELVQATR	3	GTHYSNEVYELVQATR3	14637.5	14661.7	17927
F1M7L9	F1M7L9	PKP2_RAT	Pkp2	Plakophilin-2	1	GTIADYQPDDK	GTIADYQPDDK	2	GTIADYQPDDK2	4314.7	784.382	3445.57
P0C1S9	P0C1S9	DGLB_RAT	Daglb	Diacylglycerol lipase-beta	1	GTICNPGPR	GTIC(UniMod:4)NPGPR	2	GTIC(UniMod:4)NPGPR2	18549.8	11319.3	9980.94
P19945	P19945	RLA0_RAT	Rplp0	Large ribosomal subunit protein uL10	1	GTIEILSDVQLIK	GTIEILSDVQLIK	2	GTIEILSDVQLIK2	140138	86298.2	92066.3
P19945	P19945	RLA0_RAT	Rplp0	Large ribosomal subunit protein uL10	1	GTIEILSDVQLIK	GTIEILSDVQLIK	3	GTIEILSDVQLIK3	1760.23	1333.31	3741.72
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	GTIEYTVESR	GTIEYTVESR	2	GTIEYTVESR2	91453.4	97011	91435.1
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	GTIGAGPIPIK	GTIGAGPIPIK	2	GTIGAGPIPIK2	26900.8	16980.3	17827.9
G3V6G1	G3V6G1	G3V6G1_RAT	Jchain	Joining chain of multimeric IgA and IgM	1	GTILADNK	GTILADNK	1	GTILADNK1	81645.2	85242.3	78464.1
G3V6G1	G3V6G1	G3V6G1_RAT	Jchain	Joining chain of multimeric IgA and IgM	1	GTILADNK	GTILADNK	2	GTILADNK2	2.71301e+06	2.75625e+06	2.87051e+06
A0A8I6A3Z5	A0A8I6A3Z5	A0A8I6A3Z5_RAT	Uba2	SUMO-activating enzyme subunit 2	1	GTILISSEEGETEANNPK	GTILISSEEGETEANNPK	2	GTILISSEEGETEANNPK2	7256.79	3066.19	3317.41
D3ZD83	D3ZD83	D3ZD83_RAT	Mfsd10	Major facilitator superfamily domain containing 10	1	GTIMGILR	GTIMGILR	2	GTIMGILR2	51844.1	56996.8	54656.4
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	GTINFLHADCDK	GTINFLHADC(UniMod:4)DK	2	GTINFLHADC(UniMod:4)DK2	3981.36	5823.46	2568.73
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	GTINFLHADCDK	GTINFLHADC(UniMod:4)DK	3	GTINFLHADC(UniMod:4)DK3	38662.9	36745.9	42991.5
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	GTINFLHADCDKFR	GTINFLHADC(UniMod:4)DKFR	2	GTINFLHADC(UniMod:4)DKFR2	2058.25	2380.75	
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	GTINFLHADCDKFR	GTINFLHADC(UniMod:4)DKFR	3	GTINFLHADC(UniMod:4)DKFR3	87602.5	83926.1	78605.3
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	GTINFLHADCDKFR	GTINFLHADC(UniMod:4)DKFR	4	GTINFLHADC(UniMod:4)DKFR4	75163.5	63762.7	52460.3
Q9Z1A5	Q9Z1A5	ULA1_RAT	Nae1	NEDD8-activating enzyme E1 regulatory subunit	1	GTIPDMIADSNK	GTIPDMIADSNK	2	GTIPDMIADSNK2	27861	13663.9	26010.8
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	GTIPIKYPPVTTFSGYLLYR	GTIPIKYPPVTTFSGYLLYR	3	GTIPIKYPPVTTFSGYLLYR3	348902	406879	402656
O08651	O08651	SERA_RAT	Phgdh	D-3-phosphoglycerate dehydrogenase	1	GTIQVVTQGTSLK	GTIQVVTQGTSLK	2	GTIQVVTQGTSLK2	10160.5	6322.39	11140.7
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	GTITDASGFDPLR	GTITDASGFDPLR	2	GTITDASGFDPLR2	75064.2	66114.8	63818.5
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	GTITDASGFDPLRDAEVLR	GTITDASGFDPLRDAEVLR	3	GTITDASGFDPLRDAEVLR3	47221.7	54645.3	66832.7
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	GTITDASGFDPLRDAEVLRK	GTITDASGFDPLRDAEVLRK	3	GTITDASGFDPLRDAEVLRK3	19872.2	26695.5	25465.1
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	GTITDASGFDPLRDAEVLRK	GTITDASGFDPLRDAEVLRK	4	GTITDASGFDPLRDAEVLRK4	43806.6	26649	41740.7
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	GTITIQDTGIGMTK	GTITIQDTGIGMTK	2	GTITIQDTGIGMTK2	29630.8	15332.4	15814.9
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	GTITLELLEHNEAYTWTNPTCCVHNIIVGK	GTITLELLEHNEAYTWTNPTC(UniMod:4)C(UniMod:4)VHNIIVGK	4	GTITLELLEHNEAYTWTNPTC(UniMod:4)C(UniMod:4)VHNIIVGK4	5386.59	5367.53	1707.62
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	GTITQNER	GTITQNER	2	GTITQNER2			13913.6
Q6Q3E8	Q6Q3E8	Q6Q3E8_RAT	Eng	Endoglin	1	GTITSIAALDDPK	GTITSIAALDDPK	2	GTITSIAALDDPK2			4941.62
D4A1R8	D4A1R8	CPNE1_RAT	Cpne1	Copine-1	1	GTITVSAQELK	GTITVSAQELK	2	GTITVSAQELK2		22479.5	
A0A0G2K583	A0A0G2K583	A0A0G2K583_RAT	Mtap	S-methyl-5'-thioadenosine phosphorylase	1	GTIVTIEGPR	GTIVTIEGPR	2	GTIVTIEGPR2	12169	14198.1	15026
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	GTKDPSPDIR	GTKDPSPDIR	2	GTKDPSPDIR2	20120	16172.7	11367.5
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	GTKDPSPDIRK	GTKDPSPDIRK	2	GTKDPSPDIRK2			5364.35
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	GTKDPSPDIRK	GTKDPSPDIRK	3	GTKDPSPDIRK3			23460.8
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	GTKPPSPYAILTVGETSHK	GTKPPSPYAILTVGETSHK	3	GTKPPSPYAILTVGETSHK3		3063.21	
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	GTKPPSPYAILTVGETSHK	GTKPPSPYAILTVGETSHK	4	GTKPPSPYAILTVGETSHK4	138268	147105	184940
Q63189	Q63189	PRG2_RAT	Prg2	Bone marrow proteoglycan	1	GTLASIHSFSVNFR	GTLASIHSFSVNFR	3	GTLASIHSFSVNFR3	14141	12157.9	22370.3
A0A0G2JYX9	A0A0G2JYX9	A0A0G2JYX9_RAT	Irak1	Interleukin-1 receptor-associated kinase 1	1	GTLAYLPEEYIK	GTLAYLPEEYIK	2	GTLAYLPEEYIK2	10281.1	6442.94	4559.66
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	GTLDPVEK	GTLDPVEK	1	GTLDPVEK1	80880	57979.6	60649.6
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	GTLDPVEK	GTLDPVEK	2	GTLDPVEK2	2.405e+06	2.59409e+06	2.57246e+06
P83006	P83006	PAFA2_RAT	Pafah2	Platelet-activating factor acetylhydrolase 2, cytoplasmic	1	GTLDPYEGQEVMVR	GTLDPYEGQEVMVR	2	GTLDPYEGQEVMVR2	19853	25414.5	24427
P85171	P85171	MDGA1_RAT	Mdga1	MAM domain-containing glycosylphosphatidylinositol anchor protein 1	1	GTLDTHAWSLSGNK	GTLDTHAWSLSGNK	3	GTLDTHAWSLSGNK3	6165.14		10567.8
A0A8I6A2I6	A0A8I6A2I6	A0A8I6A2I6_RAT	Frrs1	Ferric-chelate reductase 1	1	GTLEDMAWR	GTLEDMAWR	2	GTLEDMAWR2	11909.6	23559.2	21946.2
P14659	P0DMW0;P0DMW1;P55063;P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	0	GTLEPVEK	GTLEPVEK	1	GTLEPVEK1	2603.53	2355.52	
P14659	P0DMW0;P0DMW1;P55063;P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	0	GTLEPVEK	GTLEPVEK	2	GTLEPVEK2	137207	107428	114187
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	GTLGGMFGMLK	GTLGGMFGMLK	2	GTLGGMFGMLK2	33142.9	48330.9	44180.8
Q66H91	Q66H91	GIT2_RAT	Git2	ARF GTPase-activating protein GIT2	1	GTLICDECCSVHR	GTLIC(UniMod:4)DEC(UniMod:4)C(UniMod:4)SVHR	2	GTLIC(UniMod:4)DEC(UniMod:4)C(UniMod:4)SVHR2	1081.53		
Q66H91	Q66H91	GIT2_RAT	Git2	ARF GTPase-activating protein GIT2	1	GTLICDECCSVHR	GTLIC(UniMod:4)DEC(UniMod:4)C(UniMod:4)SVHR	3	GTLIC(UniMod:4)DEC(UniMod:4)C(UniMod:4)SVHR3	23904.1	18677.3	24121.5
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	GTLIEAFPVLGGK	GTLIEAFPVLGGK	2	GTLIEAFPVLGGK2	98141.2	95280.1	91012.9
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	GTLIQGVLR	GTLIQGVLR	2	GTLIQGVLR2	70531.1	73467.9	88098.7
Q99PW3	Q99PW3	NEUR1_RAT	Neu1	Sialidase-1	1	GTLLAFAEAR	GTLLAFAEAR	2	GTLLAFAEAR2	15250.5	10956.1	18020
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	GTLLAVER	GTLLAVER	2	GTLLAVER2	1.99066e+07	2.30545e+07	2.40469e+07
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	GTLLAVERK	GTLLAVERK	2	GTLLAVERK2	28645.3	31142.1	26312.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GTLQHCDFNVK	GTLQHC(UniMod:4)DFNVK	2	GTLQHC(UniMod:4)DFNVK2	37243.4	33137.4	20900.2
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GTLQHCDFNVK	GTLQHC(UniMod:4)DFNVK	3	GTLQHC(UniMod:4)DFNVK3	294243	371595	317958
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	GTLQSYFD	GTLQSYFD	1	GTLQSYFD1	14407.3	12904.6	12739.8
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	GTLQSYFD	GTLQSYFD	2	GTLQSYFD2	10624.4	5437.5	3328.98
D3Z8I2	D3Z8I2	D3Z8I2_RAT	Susd3	Sushi domain containing 3	1	GTLQVVR	GTLQVVR	2	GTLQVVR2	116928	115568	126363
D3ZF11	D3ZF11	D3ZF11_RAT	Lamtor5	Ragulator complex protein LAMTOR5	1	GTLSDEHAGVISVLAQQAAK	GTLSDEHAGVISVLAQQAAK	3	GTLSDEHAGVISVLAQQAAK3	96403.1	128464	112542
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	GTLSFIAK	GTLSFIAK	2	GTLSFIAK2	89617.4	89620.7	77066.6
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	GTLSGQLEALR	GTLSGQLEALR	2	GTLSGQLEALR2	30940.5	28784.7	36296.1
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	GTLTLCPYHSDR	GTLTLC(UniMod:4)PYHSDR	2	GTLTLC(UniMod:4)PYHSDR2	15254.8	18208.6	18346.1
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	GTLTLCPYHSDR	GTLTLC(UniMod:4)PYHSDR	3	GTLTLC(UniMod:4)PYHSDR3	83586.3	75368.6	102485
A0A8I5Y7Q0	A0A8I5Y7Q0	A0A8I5Y7Q0_RAT	Vps13b	Vacuolar protein sorting 13 homolog B	1	GTLTSITNLATSLAR	GTLTSITNLATSLAR	2	GTLTSITNLATSLAR2			10632
D4A929	D4A929	WDR81_RAT	Wdr81	WD repeat-containing protein 81	1	GTLTSLALLPTK	GTLTSLALLPTK	2	GTLTSLALLPTK2	2760.07	6732.46	2289.8
A0A8I5ZTB8	A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	GTLTVTNYR	GTLTVTNYR	2	GTLTVTNYR2	42745.6	39781.4	42580.9
B5DEY9	B5DEY9	B5DEY9_RAT	Csgalnact1	Hexosyltransferase	1	GTLYELTFK	GTLYELTFK	2	GTLYELTFK2	7200.44		7596.4
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	GTMDPALR	GTMDPALR	2	GTMDPALR2	186905	199121	149927
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	GTMGEPTYDAEFQHFLR	GTMGEPTYDAEFQHFLR	3	GTMGEPTYDAEFQHFLR3	27450.2	39452.9	48446
P53678	P53678	AP3M2_RAT	Ap3m2	AP-3 complex subunit mu-2	1	GTMGLQVGASKPDENPTINLQFK	GTMGLQVGASKPDENPTINLQFK	3	GTMGLQVGASKPDENPTINLQFK3	7767.66	8612.29	8235.38
Q66H47	Q66H47	RM24_RAT	Mrpl24	Large ribosomal subunit protein uL24m	1	GTMIPSEAPLLHHQVK	GTMIPSEAPLLHHQVK	4	GTMIPSEAPLLHHQVK4	9360.71	7388.27	
Q7TP98	Q7TP98	ILF2_RAT	Ilf2	Interleukin enhancer-binding factor 2	1	GTMTTGHNVADLVVILK	GTMTTGHNVADLVVILK	3	GTMTTGHNVADLVVILK3	2298.89	8773.16	1401.75
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GTMYWSDWGNHPK	GTMYWSDWGNHPK	2	GTMYWSDWGNHPK2	8343.24	4812.59	8815.29
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GTMYWSDWGNHPK	GTMYWSDWGNHPK	3	GTMYWSDWGNHPK3	45438.5	38929.8	60079.5
P97612	P97612	FAAH1_RAT	Faah	Fatty-acid amide hydrolase 1	1	GTNCVTSYLTDCETQLSQAPR	GTNC(UniMod:4)VTSYLTDC(UniMod:4)ETQLSQAPR	3	GTNC(UniMod:4)VTSYLTDC(UniMod:4)ETQLSQAPR3	8508.43	9423.19	6334
P31000	P47819;P31000	VIME_RAT	Vim	Vimentin	0	GTNESLER	GTNESLER	2	GTNESLER2	33288.5	19883.4	25427.6
Q5XIP1	Q5XIP1	PELO_RAT	Pelo	Protein pelota homolog	1	GTNIQENEYVK	GTNIQENEYVK	2	GTNIQENEYVK2	53252.3	55546.2	55882.2
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	GTNTVLQNNIVAGFGR	GTNTVLQNNIVAGFGR	2	GTNTVLQNNIVAGFGR2	41439.6	54543.5	42218.1
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	GTNTVLQNNIVAGFGR	GTNTVLQNNIVAGFGR	3	GTNTVLQNNIVAGFGR3	7346.6	6397.55	4934.17
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GTNVCAVANGGCQQLCLYR	GTNVC(UniMod:4)AVANGGC(UniMod:4)QQLC(UniMod:4)LYR	3	GTNVC(UniMod:4)AVANGGC(UniMod:4)QQLC(UniMod:4)LYR3	14073	18281.3	15181.7
Q9JHX4	Q9JHX4	CASP8_RAT	Casp8	Caspase-8	1	GTNYDEEALSK	GTNYDEEALSK	2	GTNYDEEALSK2	1595.88	2863.73	4161.87
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	GTPAGDPAWR	GTPAGDPAWR	2	GTPAGDPAWR2	521098	598073	512364
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	GTPAGDPAWREEYR	GTPAGDPAWREEYR	2	GTPAGDPAWREEYR2	10176	14453	13144.2
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	GTPAGDPAWREEYR	GTPAGDPAWREEYR	3	GTPAGDPAWREEYR3	165494	238836	208358
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	GTPAPQVTWLLNGQPIQFAR	GTPAPQVTWLLNGQPIQFAR	3	GTPAPQVTWLLNGQPIQFAR3	6082.83	15581.1	7029.51
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	GTPDAGAASEEK	GTPDAGAASEEK	2	GTPDAGAASEEK2	10854.6		15276.4
A0A8I6A8L3	A0A8I6A8L3	A0A8I6A8L3_RAT	Dnpep	Aspartyl aminopeptidase	1	GTPEPGPLSATDER	GTPEPGPLSATDER	2	GTPEPGPLSATDER2	21985.2	17960	12756.4
D4ADD7	D4ADD7	D4ADD7_RAT	Glrx5	Glutaredoxin 5	1	GTPEQPQCGFSNAVVQILR	GTPEQPQC(UniMod:4)GFSNAVVQILR	3	GTPEQPQC(UniMod:4)GFSNAVVQILR3	32306.2	30137.3	37008.7
Q6QI25	Q6QI25;D4A2I4	ORML3_RAT	Ormdl3	ORM1-like protein 3	0	GTPFETPDQGK	GTPFETPDQGK	2	GTPFETPDQGK2	74806.2	82590.7	64636.3
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	GTPGPTVR	GTPGPTVR	2	GTPGPTVR2	393959	443025	447673
Q05701	Q05701	BPIB3_RAT	Bpifb3	BPI fold-containing family B member 3	1	GTPILILK	GTPILILK	2	GTPILILK2		13674.8	15307.9
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	GTPIPDSSSALGSGEFTGVK	GTPIPDSSSALGSGEFTGVK	2	GTPIPDSSSALGSGEFTGVK2	14469.1	17037.1	19648.7
P52873	P52873	PYC_RAT	Pc	Pyruvate carboxylase, mitochondrial	1	GTPLDTEVPLER	GTPLDTEVPLER	2	GTPLDTEVPLER2	13275	13191.8	18414.4
A0A8I5ZUT2	A0A8I5ZUT2	A0A8I5ZUT2_RAT	Irgq	Immunity-related GTPase Q	1	GTPLLAVR	GTPLLAVR	2	GTPLLAVR2	23033	15488.7	19376.4
Q6AY61	Q6AY61	PRS23_RAT	Prss23	Serine protease 23	1	GTPLPTYEEAK	GTPLPTYEEAK	2	GTPLPTYEEAK2	4940.13	5196.67	7047.04
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	GTPLYGQPSWWGDEEVDEQR	GTPLYGQPSWWGDEEVDEQR	3	GTPLYGQPSWWGDEEVDEQR3	5854.12	3839.01	5714.62
Q9Z2Q7	Q9Z2Q7	STX8_RAT	Stx8	Syntaxin-8	1	GTPNPWLCEEPEETR	GTPNPWLC(UniMod:4)EEPEETR	2	GTPNPWLC(UniMod:4)EEPEETR2	21302.9	13847.3	15785.1
D3ZFJ6	D3ZFJ6	D3ZFJ6_RAT	Lactb	Lactamase, beta	1	GTPPPDQEK	GTPPPDQEK	2	GTPPPDQEK2			9524.41
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	GTPQDLAR	GTPQDLAR	2	GTPQDLAR2	2.66699e+06	2.63616e+06	2.39511e+06
Q9JLZ1	Q9JLZ1	GLRX3_RAT	Glrx3	Glutaredoxin-3	1	GTPQEPR	GTPQEPR	2	GTPQEPR2			130901
D3ZGC2	D3ZGC2	D3ZGC2_RAT	Arid3b	AT-rich interactive domain-containing protein 3	1	GTPSAEPSTSWSL	GTPSAEPSTSWSL	2	GTPSAEPSTSWSL2			2416.85
Q4KLH5	Q4KLH5	AGFG1_RAT	Agfg1	Arf-GAP domain and FG repeat-containing protein 1	1	GTPTQSPVVGR	GTPTQSPVVGR	2	GTPTQSPVVGR2	33988.1	29339.7	34998.6
P20909	P20909	COBA1_RAT	Col11a1	Collagen alpha-1(XI) chain	1	GTQAFLLSLYNEHGIQQLGVEVGR	GTQAFLLSLYNEHGIQQLGVEVGR	3	GTQAFLLSLYNEHGIQQLGVEVGR3		3952.45	
Q811U3	Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	1	GTQAGEIHDLK	GTQAGEIHDLK	2	GTQAGEIHDLK2	2678.55		2778.42
Q811U3	Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	1	GTQAGEIHDLK	GTQAGEIHDLK	3	GTQAGEIHDLK3	3368.99		3813.62
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	GTQCEDINECEVFPGVCK	GTQC(UniMod:4)EDINEC(UniMod:4)EVFPGVC(UniMod:4)K	3	GTQC(UniMod:4)EDINEC(UniMod:4)EVFPGVC(UniMod:4)K3		13990.3	17311.8
D4A8S0	D4A8S0	D4A8S0_RAT	Sox13	SRY-box transcription factor 13	1	GTQESLAEK	GTQESLAEK	2	GTQESLAEK2			9728.44
A0A8I6AW91	A0A8I6AW91	A0A8I6AW91_RAT	Srp72	Signal recognition particle subunit SRP72	1	GTQGATAGASSELDASK	GTQGATAGASSELDASK	2	GTQGATAGASSELDASK2	2587.63	3101.98	3580.69
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	GTQGVHCEINVDDCHPPLDPASR	GTQGVHC(UniMod:4)EINVDDC(UniMod:4)HPPLDPASR	3	GTQGVHC(UniMod:4)EINVDDC(UniMod:4)HPPLDPASR3	6373.81	8993.95	5819.69
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	GTQGVHCEINVDDCHPPLDPASR	GTQGVHC(UniMod:4)EINVDDC(UniMod:4)HPPLDPASR	4	GTQGVHC(UniMod:4)EINVDDC(UniMod:4)HPPLDPASR4	33204.7	45676.6	25958.1
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	GTQGVVTNFEIFR	GTQGVVTNFEIFR	2	GTQGVVTNFEIFR2	80276.4	99569.5	105696
D3ZU48	D3ZU48	D3ZU48_RAT	Klhdc4	Kelch domain containing 4	1	GTQHSDMFLLKPEDGGEDK	GTQHSDMFLLKPEDGGEDK	3	GTQHSDMFLLKPEDGGEDK3	3758.87	4227.28	9058.28
D3ZU48	D3ZU48	D3ZU48_RAT	Klhdc4	Kelch domain containing 4	1	GTQHSDMFLLKPEDGGEDK	GTQHSDMFLLKPEDGGEDK	4	GTQHSDMFLLKPEDGGEDK4	36217	22658.8	30667.8
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	GTQIYAAK	GTQIYAAK	2	GTQIYAAK2	10357	4994.18	10160
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	GTQLCQDLMGNFFCLCK	GTQLC(UniMod:4)QDLMGNFFC(UniMod:4)LC(UniMod:4)K	3	GTQLC(UniMod:4)QDLMGNFFC(UniMod:4)LC(UniMod:4)K3	6919.71	5587.5	9431.15
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	GTQLDSLTLASINTDFAFSLYK	GTQLDSLTLASINTDFAFSLYK	3	GTQLDSLTLASINTDFAFSLYK3		3377.17	
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	GTQLDSLTLASINTDFAFSLYKK	GTQLDSLTLASINTDFAFSLYKK	3	GTQLDSLTLASINTDFAFSLYKK3	4126.45	4688.63	8546.8
Q63556	Q63556	SPA3M_RAT	Serpina3m	Serine protease inhibitor A3M (Fragment)	1	GTQLDSLTLESINTDFAFSLYK	GTQLDSLTLESINTDFAFSLYK	3	GTQLDSLTLESINTDFAFSLYK3	4699.29	6252.91	4903.77
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	GTQLMNGTSMSSPNACGGIALVLSGLK	GTQLMNGTSMSSPNAC(UniMod:4)GGIALVLSGLK	3	GTQLMNGTSMSSPNAC(UniMod:4)GGIALVLSGLK3	9364.36	8702.13	7802.65
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	GTQLYEANQLLQFENNAEDLKR	GTQLYEANQLLQFENNAEDLKR	3	GTQLYEANQLLQFENNAEDLKR3	5742.73	6419.91	6756.98
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	GTQNCVQR	GTQNC(UniMod:4)VQR	2	GTQNC(UniMod:4)VQR2			1737.85
D4A2G6	D4A2G6	D4A2G6_RAT	Thbs2	Thrombospondin 2	1	GTQPFGIGLEDAK	GTQPFGIGLEDAK	2	GTQPFGIGLEDAK2	38723.7	41418.2	24670.1
Q924S4	Q924S4	KREM1_RAT	Kremen1	Kremen protein 1	1	GTQSWTALQGGK	GTQSWTALQGGK	2	GTQSWTALQGGK2	3696.01	7891.85	3440.92
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	GTQWYEQTK	GTQWYEQTK	2	GTQWYEQTK2	1719.68	5888.38	3311.8
O88831	O88831	KKCC2_RAT	Camkk2	Calcium/calmodulin-dependent protein kinase kinase 2	1	GTRPAPGGCIQPR	GTRPAPGGC(UniMod:4)IQPR	3	GTRPAPGGC(UniMod:4)IQPR3	3517.11	657.814	2330.12
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	GTRPEQLYVQVFLK	GTRPEQLYVQVFLK	3	GTRPEQLYVQVFLK3	24220.7	18606.9	24077.6
B1H274	B1H274	B1H274_RAT	Atg4a	Cysteine protease	1	GTSAPCLAWK	GTSAPC(UniMod:4)LAWK	2	GTSAPC(UniMod:4)LAWK2	3854.64		5927.68
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	GTSAYFLFLR	GTSAYFLFLR	2	GTSAYFLFLR2	23268.3	22388.3	19225.7
P13803	P13803	ETFA_RAT	Etfa	Electron transfer flavoprotein subunit alpha, mitochondrial	1	GTSFEAAAASGGSASSEK	GTSFEAAAASGGSASSEK	2	GTSFEAAAASGGSASSEK2	34969.7	25463.8	25412.6
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	GTSFLDYLSDK	GTSFLDYLSDK	2	GTSFLDYLSDK2	29010.7	32050	25332.3
Q7TP59	Q7TP59	Q7TP59_RAT	Dipk2a	Ab2-095	1	GTSGGLLHDPPSEIAK	GTSGGLLHDPPSEIAK	3	GTSGGLLHDPPSEIAK3	12865.7	14303.9	
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	GTSGSLADVFANTR	GTSGSLADVFANTR	2	GTSGSLADVFANTR2	6266.77	9992.45	5502.14
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	GTSHEMPK	GTSHEMPK	2	GTSHEMPK2			12253.3
Q5XIL4	Q5XIL4	Q5XIL4_RAT	Sorbs3	Sorbin and SH3 domain containing 3	1	GTSHPTNLGSSSLNTTEIHWTPYR	GTSHPTNLGSSSLNTTEIHWTPYR	4	GTSHPTNLGSSSLNTTEIHWTPYR4	14419.3	19261.9	13382.3
A0A8I6GK77	A0A8I6GK77	A0A8I6GK77_RAT	Bcas3	BCAS3, microtubule associated cell migration factor	1	GTSHVFPINPYGGQPCVR	GTSHVFPINPYGGQPC(UniMod:4)VR	3	GTSHVFPINPYGGQPC(UniMod:4)VR3	5721.3	6191.32	6063.48
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	GTSLHSLR	GTSLHSLR	2	GTSLHSLR2	120453	104206	93052.3
D3ZN06	D3ZN06	D3ZN06_RAT	Cd248	CD248 molecule	1	GTSLLCVK	GTSLLC(UniMod:4)VK	1	GTSLLC(UniMod:4)VK1	17844.9	32430.1	22078.6
D3ZN06	D3ZN06	D3ZN06_RAT	Cd248	CD248 molecule	1	GTSLLCVK	GTSLLC(UniMod:4)VK	2	GTSLLC(UniMod:4)VK2	1.66489e+06	1.82526e+06	1.51341e+06
Q5U303	Q5U303	TAB2_RAT	Tab2	TGF-beta-activated kinase 1 and MAP3K7-binding protein 2	1	GTSNLSQQTPR	GTSNLSQQTPR	2	GTSNLSQQTPR2	5832.73	5412.97	5897.02
Q66HC5	Q66HC5	NUP93_RAT	Nup93	Nuclear pore complex protein Nup93	1	GTSPSSATRPQR	GTSPSSATRPQR	3	GTSPSSATRPQR3			10345.8
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	GTSPTQIWCNNSQLPVDHILAGSFETAMR	GTSPTQIWC(UniMod:4)NNSQLPVDHILAGSFETAMR	4	GTSPTQIWC(UniMod:4)NNSQLPVDHILAGSFETAMR4		15217	8196.42
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	GTSQNDPNWVVR	GTSQNDPNWVVR	2	GTSQNDPNWVVR2	21969.6	27543.5	28091.7
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	GTSQNDPNWVVR	GTSQNDPNWVVR	3	GTSQNDPNWVVR3	108690	127111	157388
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	GTSQNDPNWVVRHQGK	GTSQNDPNWVVRHQGK	3	GTSQNDPNWVVRHQGK3	2729.96	6598.84	
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	GTSQNDPNWVVRHQGK	GTSQNDPNWVVRHQGK	4	GTSQNDPNWVVRHQGK4	6852.39	6404.93	
Q64244	Q64244	CD38_RAT	Cd38	ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1	1	GTSSNACSSPSINELK	GTSSNAC(UniMod:4)SSPSINELK	2	GTSSNAC(UniMod:4)SSPSINELK2	89129.4	93456.7	103296
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	GTSSTTNTGK	GTSSTTNTGK	2	GTSSTTNTGK2	1507.17		2221.26
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	GTSTPEYNVK	GTSTPEYNVK	2	GTSTPEYNVK2	199219	223915	216686
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	GTSTVSFK	GTSTVSFK	2	GTSTVSFK2	39474.9	27149.2	
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	GTSWGPPTSK	GTSWGPPTSK	2	GTSWGPPTSK2	24721.4	25016.1	24790.1
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	GTSYQSPHGIPIDLLDR	GTSYQSPHGIPIDLLDR	2	GTSYQSPHGIPIDLLDR2	17186.3	8039.63	14650.1
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	GTSYQSPHGIPIDLLDR	GTSYQSPHGIPIDLLDR	3	GTSYQSPHGIPIDLLDR3	111691	110802	101137
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	GTTAAQMSQVLHFGSIQDFK	GTTAAQMSQVLHFGSIQDFK	3	GTTAAQMSQVLHFGSIQDFK3	29108.2	23154.1	34493.2
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	GTTATLCCGATHDPR	GTTATLC(UniMod:4)C(UniMod:4)GATHDPR	3	GTTATLC(UniMod:4)C(UniMod:4)GATHDPR3	5216.5	3482.08	
Q9JHW0	Q9JHW0	PSB7_RAT	Psmb7	Proteasome subunit beta type-7	1	GTTAVLTEK	GTTAVLTEK	1	GTTAVLTEK1	52419.2	50632.3	51672.5
Q9JHW0	Q9JHW0	PSB7_RAT	Psmb7	Proteasome subunit beta type-7	1	GTTAVLTEK	GTTAVLTEK	2	GTTAVLTEK2	796194	875722	947241
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	GTTEEICQIYLR	GTTEEIC(UniMod:4)QIYLR	2	GTTEEIC(UniMod:4)QIYLR2	43452	42733.3	52383.6
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	GTTEEVELR	GTTEEVELR	2	GTTEEVELR2	8666.71	12476.1	9713.2
A0A8I5ZQH9	A0A8I5ZQH9	A0A8I5ZQH9_RAT	Dcaf6	DDB1 and CUL4 associated factor 6	1	GTTGMVAR	GTTGMVAR	2	GTTGMVAR2		6878.95	8142.51
A0A8I5ZTN5	A0A8I5ZTN5	A0A8I5ZTN5_RAT	Adsl	Adenylosuccinate lyase	1	GTTGTQASFLQLFEGDHQK	GTTGTQASFLQLFEGDHQK	3	GTTGTQASFLQLFEGDHQK3	12160	8948.94	8189.25
Q9JHW5	Q9JHW5	VAMP7_RAT	Vamp7	Vesicle-associated membrane protein 7	1	GTTILAK	GTTILAK	1	GTTILAK1	4879.3	5963.47	2776.26
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	GTTITGTAGTTVGK	GTTITGTAGTTVGK	2	GTTITGTAGTTVGK2	15112.4	12853.7	19368.1
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	GTTITLVLK	GTTITLVLK	1	GTTITLVLK1	25185.4	8890.19	18679.8
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	GTTITLVLK	GTTITLVLK	2	GTTITLVLK2	280761	473233	222287
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	GTTITLVLKEEASDYLELDTIK	GTTITLVLKEEASDYLELDTIK	3	GTTITLVLKEEASDYLELDTIK3	27597.1	17933	13665.9
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	GTTLDLATSK	GTTLDLATSK	2	GTTLDLATSK2	52835.6	47152	39917.7
B0BNE3	B0BNE3	B0BNE3_RAT	Trappc5	Trafficking protein particle complex subunit 5	1	GTTLMIK	GTTLMIK	2	GTTLMIK2	15268.2	16854.5	14850.8
P16573	P16573	CEAM1_RAT	Ceacam1	Carcinoembryonic antigen-related cell adhesion molecule 1	1	GTTLNPDSEIAR	GTTLNPDSEIAR	2	GTTLNPDSEIAR2	84768.9	78019.3	80069.2
P17945	P17945	HGF_RAT	Hgf	Hepatocyte growth factor	1	GTTNTIWNGIPCQR	GTTNTIWNGIPC(UniMod:4)QR	2	GTTNTIWNGIPC(UniMod:4)QR2	5322.93	5190.43	4238.1
A0A8I6GJC5	A0A8I6GJC5	A0A8I6GJC5_RAT	Reps1	RALBP1 associated Eps domain containing 1	1	GTTPLAPPPKPVR	GTTPLAPPPKPVR	3	GTTPLAPPPKPVR3	20025.5	15444.5	15160.9
F7FL34	F7FL34	F7FL34_RAT	Ceacam4	CEA cell adhesion molecule 4	1	GTTPNLDSEIAR	GTTPNLDSEIAR	2	GTTPNLDSEIAR2	22017.9	15566	15255.4
D4A2G6	D4A2G6	D4A2G6_RAT	Thbs2	Thrombospondin 2	1	GTTQIDPNWVIR	GTTQIDPNWVIR	2	GTTQIDPNWVIR2	17544.3	34014.6	33634.2
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	GTTVCTASCLQLHK	GTTVC(UniMod:4)TASC(UniMod:4)LQLHK	3	GTTVC(UniMod:4)TASC(UniMod:4)LQLHK3	8593.98	5399.1	6028.82
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	GTVACGEPPAVEHAR	GTVAC(UniMod:4)GEPPAVEHAR	3	GTVAC(UniMod:4)GEPPAVEHAR3	17876.6	12568.7	15048
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	GTVACGQPPVVENAK	GTVAC(UniMod:4)GQPPVVENAK	2	GTVAC(UniMod:4)GQPPVVENAK2	28417	26207.4	35681.6
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GTVATEMSTER	GTVATEMSTER	2	GTVATEMSTER2	2.3072e+06	3.09749e+06	2.78049e+06
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	GTVAYVGATLFATGK	GTVAYVGATLFATGK	2	GTVAYVGATLFATGK2	29117.8	22601.5	23730.5
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	GTVAYVGATLFATGK	GTVAYVGATLFATGK	3	GTVAYVGATLFATGK3	4260.47	7939.51	5427.16
Q9JID1	Q9JID1	PDCD4_RAT	Pdcd4	Programmed cell death protein 4	1	GTVDCVQAR	GTVDC(UniMod:4)VQAR	2	GTVDC(UniMod:4)VQAR2	21862.1	24403.6	18132.8
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	GTVDEFSGAEHIDQLR	GTVDEFSGAEHIDQLR	2	GTVDEFSGAEHIDQLR2	6744.31	5230.01	1735.6
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	GTVDEFSGAEHIDQLR	GTVDEFSGAEHIDQLR	3	GTVDEFSGAEHIDQLR3	151180	175552	164633
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	GTVDEFSGAEHIDQLRR	GTVDEFSGAEHIDQLRR	3	GTVDEFSGAEHIDQLRR3	42689.3	32698.3	16625
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	GTVDEFSGAEHIDQLRR	GTVDEFSGAEHIDQLRR	4	GTVDEFSGAEHIDQLRR4	81155.6	92905.3	112689
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	GTVEPQLEAR	GTVEPQLEAR	2	GTVEPQLEAR2	8.02254e+06	8.40087e+06	8.9064e+06
A0A8I6GEV9	A0A8I6GEV9	A0A8I6GEV9_RAT	Abce1	ATP binding cassette subfamily E member 1	1	GTVGSILDR	GTVGSILDR	2	GTVGSILDR2	12751.1	22286.8	27017.1
A0A0G2K542	A0A0G2K542	A0A0G2K542_RAT	Ugp2	UTP--glucose-1-phosphate uridylyltransferase	1	GTVIIIANHGDR	GTVIIIANHGDR	3	GTVIIIANHGDR3	9311.2	10218.5	5852.16
Q5RK19	Q5RK19	SNF8_RAT	Snf8	Vacuolar-sorting protein SNF8	1	GTVLAEDQLAQMSK	GTVLAEDQLAQMSK	2	GTVLAEDQLAQMSK2	9413.98	3120.5	6236.31
D3ZZC1	D3ZZC1	D3ZZC1_RAT	Txndc5	protein disulfide-isomerase	1	GTVLALTEK	GTVLALTEK	2	GTVLALTEK2	69586.9	63493.1	56356.3
P22734	P22734	COMT_RAT	Comt	Catechol O-methyltransferase	1	GTVLLADNVIVPGTPDFLAYVR	GTVLLADNVIVPGTPDFLAYVR	3	GTVLLADNVIVPGTPDFLAYVR3	7980.36	7374.92	9175.13
P12001	P12001	RL18_RAT	Rpl18	Large ribosomal subunit protein eL18	1	GTVLLSGPR	GTVLLSGPR	2	GTVLLSGPR2	65531.8	101961	85130.3
Q62714	Q62714	DEF4_RAT	Np4	Defensin alpha 4	1	GTVLQDAVVK	GTVLQDAVVK	2	GTVLQDAVVK2	11861.8		
P97943	P97943	SCRB1_RAT	Scarb1	Scavenger receptor class B member 1	1	GTVLQEAK	GTVLQEAK	2	GTVLQEAK2	32936.1	22590.1	27100.8
Q1RP74	Q1RP74	Q1RP74_RAT	Tbcb	Tubulin folding cofactor B	1	GTVMYVGLTDFK	GTVMYVGLTDFK	2	GTVMYVGLTDFK2	12714.3	4127.99	11395.2
Q1RP74	Q1RP74	Q1RP74_RAT	Tbcb	Tubulin folding cofactor B	1	GTVMYVGLTDFKPGYWVGVR	GTVMYVGLTDFKPGYWVGVR	3	GTVMYVGLTDFKPGYWVGVR3	27417.6	20730	18260
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	GTVQDLER	GTVQDLER	2	GTVQDLER2	8166.03	9214.02	8174.12
A0A8I5ZUM9	F1M7A9;A0A8I5ZUM9	A0A8I5ZUM9_RAT	Rpl9-ps20	60S ribosomal protein L9	0	GTVQQADE	GTVQQADE	1	GTVQQADE1	1921.84		
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	GTVSGTLIGLEFIR	GTVSGTLIGLEFIR	2	GTVSGTLIGLEFIR2	152212	164286	148923
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	GTVSGTLIGLEFIR	GTVSGTLIGLEFIR	3	GTVSGTLIGLEFIR3	17732	13761.1	13065.4
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	GTVSGTLIGLEFIRK	GTVSGTLIGLEFIRK	3	GTVSGTLIGLEFIRK3	14047.5	9335.25	18254.7
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	GTVSGVLLVTPNNIMFDPHK	GTVSGVLLVTPNNIMFDPHK	3	GTVSGVLLVTPNNIMFDPHK3	53792	69031.7	62701.1
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	GTVSTSSRPVSTSAK	GTVSTSSRPVSTSAK	3	GTVSTSSRPVSTSAK3	75225.9	45675.3	61712.9
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	GTVSVTASGK	GTVSVTASGK	1	GTVSVTASGK1	29601.3	25211.2	27105.9
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	GTVSVTASGK	GTVSVTASGK	2	GTVSVTASGK2	27875.2	2.24677e+06	2.31204e+06
P14668	P14668	ANXA5_RAT	Anxa5	Annexin A5	1	GTVTDFSGFDGR	GTVTDFSGFDGR	2	GTVTDFSGFDGR2	6934.86	3698.13	9253.59
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	GTVVAEK	GTVVAEK	1	GTVVAEK1	25488.3	1601	24426.5
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	GTVVAQGGGK	GTVVAQGGGK	2	GTVVAQGGGK2			14967.4
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	GTVVTGTLER	GTVVTGTLER	2	GTVVTGTLER2	181946	172063	177448
P47942	P47942	DPYL2_RAT	Dpysl2	Dihydropyrimidinase-related protein 2	1	GTVVYGEPITASLGTDGSHYWSK	GTVVYGEPITASLGTDGSHYWSK	3	GTVVYGEPITASLGTDGSHYWSK3	30267.9	17874	12815.8
Q8R478	Q8R478	WBP2_RAT	Wbp2	WW domain-binding protein 2	1	GTVYLTPYR	GTVYLTPYR	2	GTVYLTPYR2	43124.2	27931.5	26964.5
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	GTWEHQFSVQNTTER	GTWEHQFSVQNTTER	3	GTWEHQFSVQNTTER3	4813.81	3634.05	2434.68
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	GTWEHQFSVQNTTERPFR	GTWEHQFSVQNTTERPFR	3	GTWEHQFSVQNTTERPFR3	36452.7	29032.3	33446.2
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	GTWEHQFSVQNTTERPFR	GTWEHQFSVQNTTERPFR	4	GTWEHQFSVQNTTERPFR4	93108.1	79914.3	92914
Q6MG06	Q6MG06	GNL1_RAT	Gnl1	Guanine nucleotide-binding protein-like 1	1	GTWESHAETAELVLSQGR	GTWESHAETAELVLSQGR	3	GTWESHAETAELVLSQGR3	21494.6	34323.5	28465.4
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	GTWFLTGILSSPPPPGQSHMLLLTSVPR	GTWFLTGILSSPPPPGQSHMLLLTSVPR	4	GTWFLTGILSSPPPPGQSHMLLLTSVPR4	1.79426e+06	2.05898e+06	1.97015e+06
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	GTWFLVGLVSWGEGCGHLNNYGVYTK	GTWFLVGLVSWGEGC(UniMod:4)GHLNNYGVYTK	3	GTWFLVGLVSWGEGC(UniMod:4)GHLNNYGVYTK3	32095.6	21678.7	22612.3
Q5U2M6	Q5U2M6	DCAF8_RAT	Dcaf8	DDB1- and CUL4-associated factor 8	1	GTWLASGSDDLK	GTWLASGSDDLK	2	GTWLASGSDDLK2	9124	7909.13	11284.7
A0A8I5ZVN3;A0A8I6A5T5;D3Z9G3;D3ZCN5;D3ZEK2;D3ZIM9;D3ZLH3;D3ZPH0;D3ZPN7;D3ZZH9;D4A4G7;D4A7B4;D4A870;D4A9T8;F1LWH4;M0R5R7;M0RAP0	D3ZZH9;D3ZCN5;A0A8I6A5T5;D3ZPN7;A0A8I5ZVN3;F1LWH4;M0R5R7;D3ZPH0;D4A870;D3ZLH3;D4A4G7;D4A9T8;M0RAP0;D3ZIM9;D4A7B4;D3Z9G3;D3ZEK2	A0A8I5ZVN3_RAT;A0A8I6A5T5_RAT;D3Z9G3_RAT;D3ZCN5_RAT;D3ZEK2_RAT;D3ZIM9_RAT;D3ZLH3_RAT;D3ZPH0_RAT;D3ZPN7_RAT;D3ZZH9_RAT;D4A4G7_RAT;D4A7B4_RAT;D4A870_RAT;D4A9T8_RAT;F1LWH4_RAT;M0R5R7_RAT;M0RAP0_RAT	AABR07026059.1;AABR07030162.1;AABR07032457.1;AABR07034641.1;AABR07037412.1;AABR07062466.1;AABR07067388.1;AC121209.1;ENSRNOG00000063235;ENSRNOG00000064328;ENSRNOG00000064901;ENSRNOG00000065953;ENSRNOG00000066953;ENSRNOG00000068702;LOC108348409;LOC108350287;LOC108350290	60S ribosomal protein L21	0	GTWVQLK	GTWVQLK	1	GTWVQLK1	5078.55		3264.25
A0A8I5ZVN3;A0A8I6A5T5;D3Z9G3;D3ZCN5;D3ZEK2;D3ZIM9;D3ZLH3;D3ZPH0;D3ZPN7;D3ZZH9;D4A4G7;D4A7B4;D4A870;D4A9T8;F1LWH4;M0R5R7;M0RAP0	D3ZZH9;D3ZCN5;A0A8I6A5T5;D3ZPN7;A0A8I5ZVN3;F1LWH4;M0R5R7;D3ZPH0;D4A870;D3ZLH3;D4A4G7;D4A9T8;M0RAP0;D3ZIM9;D4A7B4;D3Z9G3;D3ZEK2	A0A8I5ZVN3_RAT;A0A8I6A5T5_RAT;D3Z9G3_RAT;D3ZCN5_RAT;D3ZEK2_RAT;D3ZIM9_RAT;D3ZLH3_RAT;D3ZPH0_RAT;D3ZPN7_RAT;D3ZZH9_RAT;D4A4G7_RAT;D4A7B4_RAT;D4A870_RAT;D4A9T8_RAT;F1LWH4_RAT;M0R5R7_RAT;M0RAP0_RAT	AABR07026059.1;AABR07030162.1;AABR07032457.1;AABR07034641.1;AABR07037412.1;AABR07062466.1;AABR07067388.1;AC121209.1;ENSRNOG00000063235;ENSRNOG00000064328;ENSRNOG00000064901;ENSRNOG00000065953;ENSRNOG00000066953;ENSRNOG00000068702;LOC108348409;LOC108350287;LOC108350290	60S ribosomal protein L21	0	GTWVQLK	GTWVQLK	2	GTWVQLK2	41801.2	40014.1	
P12368	P12368	KAP2_RAT	Prkar2a	cAMP-dependent protein kinase type II-alpha regulatory subunit	1	GTYDILVTK	GTYDILVTK	2	GTYDILVTK2	18955.3	16396.2	20313.4
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	GTYFDGTGFAK	GTYFDGTGFAK	2	GTYFDGTGFAK2	31924.3	18725.4	21123.5
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	GTYGIVYAGR	GTYGIVYAGR	2	GTYGIVYAGR2	27092.7	28186.3	34972.4
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	GTYGVVYAGR	GTYGVVYAGR	2	GTYGVVYAGR2	25933	16544.5	22300.8
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	GTYIPVPVVTELQSGK	GTYIPVPVVTELQSGK	2	GTYIPVPVVTELQSGK2	1.03443e+06	909486	929420
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	GTYIPVPVVTELQSGK	GTYIPVPVVTELQSGK	3	GTYIPVPVVTELQSGK3	58855.6	60722	54962.7
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	GTYLATFHQR	GTYLATFHQR	2	GTYLATFHQR2	63213.3	49048.1	33920.4
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	GTYLATFHQR	GTYLATFHQR	3	GTYLATFHQR3	145333	145332	123971
Q4V8F9	Q4V8F9	HSDL2_RAT	Hsdl2	Hydroxysteroid dehydrogenase-like protein 2	1	GTYLTSK	GTYLTSK	2	GTYLTSK2	10321.4	11839.9	12245.2
P37727	P37727	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	1	GTYLVHLTCMSSK	GTYLVHLTC(UniMod:4)MSSK	2	GTYLVHLTC(UniMod:4)MSSK2			3849.51
P37727	P37727	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	1	GTYLVHLTCMSSK	GTYLVHLTC(UniMod:4)MSSK	3	GTYLVHLTC(UniMod:4)MSSK3	13713.2	34139.1	11316.5
P32089	P32089	TXTP_RAT	Slc25a1	Tricarboxylate transport protein, mitochondrial	1	GTYQGLTATVLK	GTYQGLTATVLK	2	GTYQGLTATVLK2	46545.4	42926.6	42332.4
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GTYQNNELK	GTYQNNELK	2	GTYQNNELK2	769606	897301	762955
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	GTYTDCAIK	GTYTDC(UniMod:4)AIK	2	GTYTDC(UniMod:4)AIK2	21420.2	16448	20437.2
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	GTYTEFLK	GTYTEFLK	2	GTYTEFLK2	41525	25228	41971.2
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	GTYTTDDSPSDIAEIR	GTYTTDDSPSDIAEIR	2	GTYTTDDSPSDIAEIR2	20794.4	13793.4	17151.1
Q6XFR6	Q6XFR6	GLPC_RAT	Gypc	Glycophorin-C	1	GTYYTNEAK	GTYYTNEAK	2	GTYYTNEAK2	44297.8	33167.1	50135.2
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	GVAALTTDPAVQAIVLDTASDALDK	GVAALTTDPAVQAIVLDTASDALDK	3	GVAALTTDPAVQAIVLDTASDALDK3	119900	104419	122573
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	GVAALTTDPAVQAIVLDTASDALDK	GVAALTTDPAVQAIVLDTASDALDK	4	GVAALTTDPAVQAIVLDTASDALDK4	3666.05	5596.8	8915.82
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	GVAAMTMDEDYQQK	GVAAMTMDEDYQQK	2	GVAAMTMDEDYQQK2	18287.4	10426	17118.4
A0A096MK24	A0A096MK24	A0A096MK24_RAT	Morc4	Microrchidia 4	1	GVADSGAPIQLVPFNR	GVADSGAPIQLVPFNR	2	GVADSGAPIQLVPFNR2	3771.24	2357.66	5942.99
A0A0G2K3D9	A0A0G2K3D9	A0A0G2K3D9_RAT	Tmem132b	Transmembrane protein 132B	1	GVADSLQR	GVADSLQR	2	GVADSLQR2	6880.34	19316.1	19214.9
B2GV39	B2GV39	B2GV39_RAT	Mgat4b	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B	1	GVAEGEVDPAFGPLEALR	GVAEGEVDPAFGPLEALR	2	GVAEGEVDPAFGPLEALR2	4380.42	5886.68	
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	GVAEPLLETDTGDK	GVAEPLLETDTGDK	2	GVAEPLLETDTGDK2	19171.8	21017.2	25056.8
B4F795	B4F795	CTL2_RAT	Slc44a2	Choline transporter-like protein 2	1	GVAEVLRDGECPAVIIPSKPLAQR	GVAEVLRDGEC(UniMod:4)PAVIIPSKPLAQR	3	GVAEVLRDGEC(UniMod:4)PAVIIPSKPLAQR3	2505.25	4257.59	6315.49
B4F795	B4F795	CTL2_RAT	Slc44a2	Choline transporter-like protein 2	1	GVAEVLRDGECPAVIIPSKPLAQR	GVAEVLRDGEC(UniMod:4)PAVIIPSKPLAQR	4	GVAEVLRDGEC(UniMod:4)PAVIIPSKPLAQR4	9548.68	9859.24	6858.43
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	GVAFQAHSVAPGSFMAR	GVAFQAHSVAPGSFMAR	2	GVAFQAHSVAPGSFMAR2	1899.34	1495.67	2095.74
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	GVAFQAHSVAPGSFMAR	GVAFQAHSVAPGSFMAR	3	GVAFQAHSVAPGSFMAR3	27547.7	34451.5	48901.8
P20788	P20788	UCRI_RAT	Uqcrfs1	Cytochrome b-c1 complex subunit Rieske, mitochondrial	1	GVAGALRPLLQSAVPATSEPPVLDVK	GVAGALRPLLQSAVPATSEPPVLDVK	3	GVAGALRPLLQSAVPATSEPPVLDVK3	7790.66	14261.4	8834.27
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GVAGAQPTVTLLR	GVAGAQPTVTLLR	2	GVAGAQPTVTLLR2	505547	580849	497062
Q3T1I4	Q3T1I4	PRRC1_RAT	Prrc1	Protein PRRC1	1	GVAGNPMVK	GVAGNPMVK	2	GVAGNPMVK2	74342.2	76992.5	72459.8
Q5RKI1	Q5RKI1	IF4A2_RAT	Eif4a2	Eukaryotic initiation factor 4A-II	1	GVAINFVTEEDKR	GVAINFVTEEDKR	3	GVAINFVTEEDKR3	11647.6	10825.5	9630.24
Q6P3V8	Q6P3V8	Q6P3V8_RAT	Eif4a1	ATP-dependent RNA helicase	1	GVAINMVTEEDK	GVAINMVTEEDK	2	GVAINMVTEEDK2	43461.2	25979.9	28779.9
Q6P3V8	Q6P3V8	Q6P3V8_RAT	Eif4a1	ATP-dependent RNA helicase	1	GVAINMVTEEDKR	GVAINMVTEEDKR	2	GVAINMVTEEDKR2	9168.04	3496.99	7277.62
Q6P3V8	Q6P3V8	Q6P3V8_RAT	Eif4a1	ATP-dependent RNA helicase	1	GVAINMVTEEDKR	GVAINMVTEEDKR	3	GVAINMVTEEDKR3	135304	94590.6	104324
O08774	O08774	RGS12_RAT	Rgs12	Regulator of G-protein signaling 12	1	GVALAQTSQR	GVALAQTSQR	2	GVALAQTSQR2	10410.2	11556.3	3519.86
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	GVALLRPEPLHR	GVALLRPEPLHR	3	GVALLRPEPLHR3	173526	148316	133864
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	GVAQGLSR	GVAQGLSR	2	GVAQGLSR2	16478.7	14706.5	12405.9
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	GVATSWLR	GVATSWLR	2	GVATSWLR2	52510.4	43765.4	56535
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	GVAVLCTE	GVAVLC(UniMod:4)TE	1	GVAVLC(UniMod:4)TE1	49639.5	56288.7	52735.2
F7EXX5	F7EXX5	F7EXX5_RAT	Irf3	Interferon regulatory factor 3	1	GVAWLDESR	GVAWLDESR	2	GVAWLDESR2	31062.3	12633.6	13444.5
Q9R1R4	Q9R1R4	TDRD7_RAT	Tdrd7	Tudor domain-containing protein 7	1	GVAYVYLFTPK	GVAYVYLFTPK	2	GVAYVYLFTPK2	9867.07	6841.02	5622.04
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	GVCEEISGVYQK	GVC(UniMod:4)EEISGVYQK	2	GVC(UniMod:4)EEISGVYQK2	961057	907310	876229
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	GVCEEISGVYQK	GVC(UniMod:4)EEISGVYQK	3	GVC(UniMod:4)EEISGVYQK3	90936.7	81038.2	94506.2
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	GVCITNFTTSWR	GVC(UniMod:4)ITNFTTSWR	2	GVC(UniMod:4)ITNFTTSWR2	105665	86079.5	90569.3
P24594	P24594	IBP5_RAT	Igfbp5	Insulin-like growth factor-binding protein 5	1	GVCLNEK	GVC(UniMod:4)LNEK	1	GVC(UniMod:4)LNEK1	3656.25	5769.29	4444.66
P24594	P24594	IBP5_RAT	Igfbp5	Insulin-like growth factor-binding protein 5	1	GVCLNEK	GVC(UniMod:4)LNEK	2	GVC(UniMod:4)LNEK2	254312	254479	258964
A0A0G2K069	A0A0G2K069	A0A0G2K069_RAT	Col11a2	Collagen type XI alpha 2 chain	1	GVCPADVAYR	GVC(UniMod:4)PADVAYR	2	GVC(UniMod:4)PADVAYR2	6171.33	14477.2	10713.3
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	GVCQSSVVAGVAR	GVC(UniMod:4)QSSVVAGVAR	2	GVC(UniMod:4)QSSVVAGVAR2	38812.4	55649.8	50407.1
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	GVCTEAGMYALR	GVC(UniMod:4)TEAGMYALR	2	GVC(UniMod:4)TEAGMYALR2	87957.5	84752.2	100550
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	GVCTEAGMYALR	GVC(UniMod:4)TEAGMYALR	3	GVC(UniMod:4)TEAGMYALR3	13726.7	20694.1	19066.7
P24062	P24062	IGF1R_RAT	Igf1r	Insulin-like growth factor 1 receptor	1	GVCVPACPPGTYR	GVC(UniMod:4)VPAC(UniMod:4)PPGTYR	2	GVC(UniMod:4)VPAC(UniMod:4)PPGTYR2	4574.27		6507.17
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	GVCVSGK	GVC(UniMod:4)VSGK	1	GVC(UniMod:4)VSGK1	8717.84	12404	11388.8
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	GVCYSAGR	GVC(UniMod:4)YSAGR	2	GVC(UniMod:4)YSAGR2	89054.6	99903.1	88712.2
Q5I6B8	Q5I6B8	PI51C_RAT	Pip5k1c	Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma	1	GVDASGETTYK	GVDASGETTYK	2	GVDASGETTYK2	15270.9	6425.46	10169
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	GVDCDIDVPK	GVDC(UniMod:4)DIDVPK	2	GVDC(UniMod:4)DIDVPK2	24851.1	64774.6	74350.6
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	GVDCMEVYEYPGYR	GVDC(UniMod:4)MEVYEYPGYR	2	GVDC(UniMod:4)MEVYEYPGYR2	57532.3	57773.8	47530.9
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	GVDCMEVYEYPGYR	GVDC(UniMod:4)MEVYEYPGYR	3	GVDC(UniMod:4)MEVYEYPGYR3	22061.2	22996.5	18546.1
A0A0G2JUG7	A0A0G2JUG7	IQEC1_RAT	Iqsec1	IQ motif and SEC7 domain-containing protein 1	1	GVDDGEDIPR	GVDDGEDIPR	2	GVDDGEDIPR2	1656.35	2768.64	2740.5
Q4V7C7	Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	1	GVDDLDFFIGDEAIEKPTYATK	GVDDLDFFIGDEAIEKPTYATK	3	GVDDLDFFIGDEAIEKPTYATK3	58909.8	56715.9	52773.9
Q07936	Q07936	ANXA2_RAT	Anxa2	Annexin A2	1	GVDEVTIVNILTNR	GVDEVTIVNILTNR	2	GVDEVTIVNILTNR2	16232.2	17556.8	12459.2
Q07936	Q07936	ANXA2_RAT	Anxa2	Annexin A2	1	GVDEVTIVNILTNR	GVDEVTIVNILTNR	3	GVDEVTIVNILTNR3	3553.71	2718.45	5348.72
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	GVDGNMHVR	GVDGNMHVR	2	GVDGNMHVR2	8347.06	5274.17	4480.96
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	GVDGSFLAR	GVDGSFLAR	2	GVDGSFLAR2	257052	252679	253463
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	GVDGSFLARPSK	GVDGSFLARPSK	2	GVDGSFLARPSK2	9256.16	2364.97	12168.4
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	GVDGSFLARPSK	GVDGSFLARPSK	3	GVDGSFLARPSK3	83527.9	107729	160516
A2VD12	A2VD12	PBIP1_RAT	Pbxip1	Pre-B-cell leukemia transcription factor-interacting protein 1	1	GVDGVCLNWGGSPQGGK	GVDGVC(UniMod:4)LNWGGSPQGGK	2	GVDGVC(UniMod:4)LNWGGSPQGGK2	2265.01	3093.98	1731.61
Q3MIE4	Q3MIE4	VAT1_RAT	Vat1	Synaptic vesicle membrane protein VAT-1 homolog	1	GVDIVMDPLGGSDTAK	GVDIVMDPLGGSDTAK	2	GVDIVMDPLGGSDTAK2	160958	154411	157960
D3ZL10	D3ZL10	D3ZL10_RAT	Col6a6	Collagen type VI alpha 6 chain	1	GVDIYSVGIGDVDDQQLIQITGTAEK	GVDIYSVGIGDVDDQQLIQITGTAEK	3	GVDIYSVGIGDVDDQQLIQITGTAEK3	2195.39		
P97711	P97711	GRK6_RAT	Grk6	G protein-coupled receptor kinase 6	1	GVDLEPTDQDFYQK	GVDLEPTDQDFYQK	2	GVDLEPTDQDFYQK2	48026.4	53696.7	29685.7
A1L1J8	A1L1J8	A1L1J8_RAT	Rab5b	RAB5B, member RAS oncogene family	1	GVDLHEQAQQNK	GVDLHEQAQQNK	2	GVDLHEQAQQNK2	1672.74	2185.01	1105.37
A1L1J8	A1L1J8	A1L1J8_RAT	Rab5b	RAB5B, member RAS oncogene family	1	GVDLHEQAQQNK	GVDLHEQAQQNK	3	GVDLHEQAQQNK3	34540.4	17467	19806.9
Q1AAU6	Q1AAU6;A0A8I5ZRL8	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	0	GVDLLQNLIK	GVDLLQNLIK	2	GVDLLQNLIK2	49889.3	33243.5	37102.1
A0A8I5ZUJ7	A0A8I5ZUJ7	A0A8I5ZUJ7_RAT	Ibtk	Inhibitor of Bruton tyrosine kinase	1	GVDLLVK	GVDLLVK	1	GVDLLVK1	5782.49	4108.64	79990.1
B0BNK1	B0BNK1	B0BNK1_RAT	Rab5c	RAB5C, member RAS oncogene family	1	GVDLQESNPASR	GVDLQESNPASR	2	GVDLQESNPASR2	185988	152094	160775
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	GVDLSGNDFK	GVDLSGNDFK	2	GVDLSGNDFK2	313756	447066	417338
M0RC99	M0RC99	RAB5A_RAT	Rab5a	Ras-related protein Rab-5A	1	GVDLTEPAQPAR	GVDLTEPAQPAR	2	GVDLTEPAQPAR2	45133.9	33548.3	37797.5
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	GVDLVLNSLAEEK	GVDLVLNSLAEEK	2	GVDLVLNSLAEEK2	18572.5	18250.7	29576.9
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	GVDNSLYCKPVHHGDCDYHR	GVDNSLYC(UniMod:4)KPVHHGDC(UniMod:4)DYHR	4	GVDNSLYC(UniMod:4)KPVHHGDC(UniMod:4)DYHR4	6440.74	6802.32	9040.01
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	GVDPQYGPNGCFR	GVDPQYGPNGC(UniMod:4)FR	2	GVDPQYGPNGC(UniMod:4)FR2	11763.9	9295.85	10693.9
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	GVDSCEGDSGGAFALPVPNVK	GVDSC(UniMod:4)EGDSGGAFALPVPNVK	3	GVDSC(UniMod:4)EGDSGGAFALPVPNVK3	1.74704e+06	1.94197e+06	2.0048e+06
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	GVDSCEGDSGGAFALPVPNVKDPK	GVDSC(UniMod:4)EGDSGGAFALPVPNVKDPK	3	GVDSC(UniMod:4)EGDSGGAFALPVPNVKDPK3	7.52234e+06	9.39659e+06	9.32358e+06
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	GVDSCEGDSGGAFALPVPNVKDPK	GVDSC(UniMod:4)EGDSGGAFALPVPNVKDPK	4	GVDSC(UniMod:4)EGDSGGAFALPVPNVKDPK4	147009	168070	173748
O09175	O09175	AMPB_RAT	Rnpep	Aminopeptidase B	1	GVDSIPGFEFNR	GVDSIPGFEFNR	2	GVDSIPGFEFNR2	5773.11		1204.12
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	GVDSQGMLLCASVEGVSR	GVDSQGMLLC(UniMod:4)ASVEGVSR	2	GVDSQGMLLC(UniMod:4)ASVEGVSR2	3906.83	4699.96	1746.82
Q6AYE5	Q6AYE5	OAF_RAT	Oaf	Out at first protein homolog	1	GVDSSVFEPLLK	GVDSSVFEPLLK	2	GVDSSVFEPLLK2	23675.8	21057.5	24536.3
G3V619	G3V619	G3V619_RAT	Ascc1	Activating signal cointegrator 1 complex subunit 1	1	GVDSTIFQNPK	GVDSTIFQNPK	2	GVDSTIFQNPK2	20727.2	25776.3	23541
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	GVDVCLEEEHSVHDVAALLK	GVDVC(UniMod:4)LEEEHSVHDVAALLK	4	GVDVC(UniMod:4)LEEEHSVHDVAALLK4	11910.4	10870.8	13453.4
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	GVDVEAAK	GVDVEAAK	2	GVDVEAAK2	158344	136238	129482
Q6AYT0	Q6AYT0	QOR_RAT	Cryz	Quinone oxidoreductase	1	GVDVIIEMLANK	GVDVIIEMLANK	2	GVDVIIEMLANK2	6085.77	5168	7495.68
P21588	P21588	5NTD_RAT	Nt5e	5'-nucleotidase	1	GVDVVVGGHTNTFLYTGNPPSK	GVDVVVGGHTNTFLYTGNPPSK	3	GVDVVVGGHTNTFLYTGNPPSK3	6477.59	3880.31	3028.93
D3ZD83	D3ZD83	D3ZD83_RAT	Mfsd10	Major facilitator superfamily domain containing 10	1	GVDWFATAIGMPAEK	GVDWFATAIGMPAEK	2	GVDWFATAIGMPAEK2	18872.5	17222.4	25200.2
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	GVDYEGGGCR	GVDYEGGGC(UniMod:4)R	2	GVDYEGGGC(UniMod:4)R2	27322.8	26622.9	33795.3
Q8VHE9	Q8VHE9	RETST_RAT	Retsat	All-trans-retinol 13,14-reductase	1	GVDYETLK	GVDYETLK	2	GVDYETLK2	16900.9	19478.9	20594
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	GVEDKDGYR	GVEDKDGYR	2	GVEDKDGYR2			1.44709e+06
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	GVEDKDGYRMK	GVEDKDGYRMK	3	GVEDKDGYRMK3		59585.6	53454.9
Q5FVM7	Q5FVM7	DJC16_RAT	Dnajc16	DnaJ homolog subfamily C member 16	1	GVEEMTR	GVEEMTR	2	GVEEMTR2	8861.63	15542	
A0A8I5ZNC2	A0A8I5ZNC2	A0A8I5ZNC2_RAT	Tmed8	Transmembrane p24 trafficking protein family member 8	1	GVEESQAAASEK	GVEESQAAASEK	2	GVEESQAAASEK2	968924		710903
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	GVEGDFLIR	GVEGDFLIR	2	GVEGDFLIR2	172782	155355	182822
Q62785	Q62785	HAP28_RAT	Pdap1	28 kDa heat- and acid-stable phosphoprotein	1	GVEGLIDIENPNR	GVEGLIDIENPNR	2	GVEGLIDIENPNR2	216734	254597	182763
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	GVEGSDEAAWR	GVEGSDEAAWR	2	GVEGSDEAAWR2	110274	140693	120047
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	GVEHAMANK	GVEHAMANK	1	GVEHAMANK1			358242
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	GVEHAMANK	GVEHAMANK	2	GVEHAMANK2			681373
P34067	P34067	PSB4_RAT	Psmb4	Proteasome subunit beta type-4	1	GVEIEGPLSAQTNWDIAHMISGFE	GVEIEGPLSAQTNWDIAHMISGFE	3	GVEIEGPLSAQTNWDIAHMISGFE3	114136	78328.7	108626
A0A8I6A3B1	A0A8I6A3B1	A0A8I6A3B1_RAT	Ncoa4	Nuclear receptor coactivator 4	1	GVEIENLGNLK	GVEIENLGNLK	2	GVEIENLGNLK2	1551.62	4992.16	3905
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	GVEITGFPEAQALGLQVFHAGTALK	GVEITGFPEAQALGLQVFHAGTALK	3	GVEITGFPEAQALGLQVFHAGTALK3		12728.7	25230.1
P21744	P21744	IBP4_RAT	Igfbp4	Insulin-like growth factor-binding protein 4	1	GVEKPLR	GVEKPLR	2	GVEKPLR2	7729.74	8668.13	14215
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	GVELSDVK	GVELSDVK	1	GVELSDVK1	19999.3	7762.59	4789.38
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	GVELSDVK	GVELSDVK	2	GVELSDVK2	2.2107e+06	1.40775e+06	1.3878e+06
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	GVELSDVKR	GVELSDVKR	2	GVELSDVKR2	505042	351388	360206
D3ZTX4	D3ZTX4	D3ZTX4_RAT	Mgam	Maltase-glucoamylase	1	GVENDVFIR	GVENDVFIR	2	GVENDVFIR2	7600.93	4534.29	7084.97
F7EKI5	F7EKI5	F7EKI5_RAT	Pcdh18	Protocadherin 18	1	GVESGFHVTR	GVESGFHVTR	2	GVESGFHVTR2	2873.1	5218.75	3161.75
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	GVESQPTWHSKPEESAGTEGQNVTDDRK	GVESQPTWHSKPEESAGTEGQNVTDDRK	4	GVESQPTWHSKPEESAGTEGQNVTDDRK4	6214.59	6374.85	9776.11
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	GVEVDPSLIK	GVEVDPSLIK	2	GVEVDPSLIK2	154754	167868	189036
P56571	P56571	ES1_RAT		ES1 protein homolog, mitochondrial	1	GVEVTVGHEQEEGGK	GVEVTVGHEQEEGGK	3	GVEVTVGHEQEEGGK3	30479.3	13822.1	16919.2
P56571	P56571	ES1_RAT		ES1 protein homolog, mitochondrial	1	GVEVTVGHEQEEGGKWPYAGTAEAVK	GVEVTVGHEQEEGGKWPYAGTAEAVK	3	GVEVTVGHEQEEGGKWPYAGTAEAVK3	7751.94	6665.24	5931.85
P56571	P56571	ES1_RAT		ES1 protein homolog, mitochondrial	1	GVEVTVGHEQEEGGKWPYAGTAEAVK	GVEVTVGHEQEEGGKWPYAGTAEAVK	4	GVEVTVGHEQEEGGKWPYAGTAEAVK4	31207.9	35655.6	34356.3
D3ZXD8	D3ZXD8	TM245_RAT	Tmem245	Transmembrane protein 245	1	GVFDASLK	GVFDASLK	2	GVFDASLK2	85968.4	96169.8	83367.3
A0A8I6AIH6	A0A8I6AIH6	A0A8I6AIH6_RAT	Suclg2	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial	1	GVFDSGLK	GVFDSGLK	2	GVFDSGLK2	169269	174246	174682
B2GV06	B2GV06	SCOT1_RAT	Oxct1	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial	1	GVFDVDK	GVFDVDK	2	GVFDVDK2	53279.4	49502.4	73677.6
B2GV06	B2GV06	SCOT1_RAT	Oxct1	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial	1	GVFDVDKK	GVFDVDKK	2	GVFDVDKK2	69956.5	53998.7	76773.9
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	GVFINVEK	GVFINVEK	2	GVFINVEK2	75953.7	63131.7	59124.1
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	GVFIVAAK	GVFIVAAK	1	GVFIVAAK1	1239.8	2307.21	
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	GVFIVAAK	GVFIVAAK	2	GVFIVAAK2	150481	143127	137935
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	GVFNIEVQAVSSVHTQDNHLEK	GVFNIEVQAVSSVHTQDNHLEK	4	GVFNIEVQAVSSVHTQDNHLEK4	13854.2	16490.8	10998.9
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	GVFNVQMEPK	GVFNVQMEPK	2	GVFNVQMEPK2	62348.9	57444.5	51746.4
Q925Q9	Q925Q9	SH3K1_RAT	Sh3kbp1	SH3 domain-containing kinase-binding protein 1	1	GVFPDNFVK	GVFPDNFVK	2	GVFPDNFVK2	30762.2	16918.6	23672.4
P12928	P12928	KPYR_RAT	Pklr	Pyruvate kinase PKLR	1	GVFPLLYR	GVFPLLYR	2	GVFPLLYR2	7456.19	4410.31	19518.6
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	GVFPVSFVHILSD	GVFPVSFVHILSD	2	GVFPVSFVHILSD2	16683.3	19551.6	16492.5
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	GVFTVQVDENRR	GVFTVQVDENRR	3	GVFTVQVDENRR3	36601.2	44828.7	35437.5
O88422	O88422	GALT5_RAT	Galnt5	Polypeptide N-acetylgalactosaminyltransferase 5	1	GVFTWPMNFGWR	GVFTWPMNFGWR	2	GVFTWPMNFGWR2	12068.1	15501.8	
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	GVFVLEEFVPEIK	GVFVLEEFVPEIK	2	GVFVLEEFVPEIK2	17527.7	12121.9	11880.7
P01026	P01026	CO3_RAT	C3	Complement C3	1	GVFVLNK	GVFVLNK	1	GVFVLNK1	38514	29928.9	27324.2
P01026	P01026	CO3_RAT	C3	Complement C3	1	GVFVLNK	GVFVLNK	2	GVFVLNK2	2.33134e+06	2.20736e+06	2.47104e+06
P01026	P01026	CO3_RAT	C3	Complement C3	1	GVFVLNKK	GVFVLNKK	2	GVFVLNKK2	286967	278404	240699
Q8CG09	A0A0G2K5H6;Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	0	GVFYSMAK	GVFYSMAK	2	GVFYSMAK2	70438	76776.2	71980
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	GVFYSTGSWAPESVTFMYQTLER	GVFYSTGSWAPESVTFMYQTLER	3	GVFYSTGSWAPESVTFMYQTLER3	398980	470522	398002
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	GVGAAATAVTQALNELLQHVK	GVGAAATAVTQALNELLQHVK	3	GVGAAATAVTQALNELLQHVK3	335221	18081.4	
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	GVGAAATAVTQALNELLQHVK	GVGAAATAVTQALNELLQHVK	4	GVGAAATAVTQALNELLQHVK4	2021.33		
Q99P39	Q99P39	NFS1_RAT	Nfs1	Cysteine desulfurase	1	GVGAIYIR	GVGAIYIR	2	GVGAIYIR2	20902.7	24203.2	25920.7
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	GVGCLDFSK	GVGC(UniMod:4)LDFSK	2	GVGC(UniMod:4)LDFSK2	102666	87324.2	102980
Q6AY20	Q6AY20	MPRD_RAT	M6pr	Cation-dependent mannose-6-phosphate receptor	1	GVGDDQLGEESEER	GVGDDQLGEESEER	2	GVGDDQLGEESEER2	1617.26	4227.06	
Q6AY20	Q6AY20	MPRD_RAT	M6pr	Cation-dependent mannose-6-phosphate receptor	1	GVGDDQLGEESEERDDHLLPM	GVGDDQLGEESEERDDHLLPM	3	GVGDDQLGEESEERDDHLLPM3	96929.5	84510	116008
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	GVGESFK	GVGESFK	1	GVGESFK1	13063.9	8041.64	10133.7
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	GVGGGGQGPPPPR	GVGGGGQGPPPPR	2	GVGGGGQGPPPPR2	9473.36	7729.4	6620.38
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	GVGGGIPPITTR	GVGGGIPPITTR	2	GVGGGIPPITTR2	56684.1	58597.2	33096.3
P06685	P06687;P06685;P06686	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	0	GVGIISEGNETVEDIAAR	GVGIISEGNETVEDIAAR	2	GVGIISEGNETVEDIAAR2	25108.8	20353.7	26858.7
P06685	P06687;P06685;P06686	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	0	GVGIISEGNETVEDIAAR	GVGIISEGNETVEDIAAR	3	GVGIISEGNETVEDIAAR3	45717.9	50812.5	46543.9
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	GVGIPAEEQHR	GVGIPAEEQHR	2	GVGIPAEEQHR2	9428	7455.13	11479.6
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	GVGIPAEEQHR	GVGIPAEEQHR	3	GVGIPAEEQHR3	24416.9	48008	26953.2
Q568Z3	Q568Z3	Q568Z3_RAT	Paqr4	Progestin and adipoQ receptor family member 4	1	GVGLGSGAPGSLPCYLR	GVGLGSGAPGSLPC(UniMod:4)YLR	2	GVGLGSGAPGSLPC(UniMod:4)YLR2	28682.7	25016.6	38109.2
A0A8J8YGQ6	A0A8J8YGQ6	A0A8J8YGQ6_RAT	Dhrsx	Dehydrogenase/reductase X-linked	1	GVGLSTACQLAR	GVGLSTAC(UniMod:4)QLAR	2	GVGLSTAC(UniMod:4)QLAR2	12568.9	22836	20820.7
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	GVGQAAIR	GVGQAAIR	2	GVGQAAIR2	1.96975e+06	1.82028e+06	1.93962e+06
D3ZF26	D3ZF26	D3ZF26_RAT	Tnks1bp1	Tankyrase 1 binding protein 1	1	GVGQADWTPDLGLR	GVGQADWTPDLGLR	2	GVGQADWTPDLGLR2	7439.52	7494.71	10897.1
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	GVGQCYDSSPCER	GVGQC(UniMod:4)YDSSPC(UniMod:4)ER	2	GVGQC(UniMod:4)YDSSPC(UniMod:4)ER2	15135.6	21521	18159.5
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	GVGTAYEGHVR	GVGTAYEGHVR	2	GVGTAYEGHVR2	4881.31	4991.62	6222.61
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	GVGTAYEGHVR	GVGTAYEGHVR	3	GVGTAYEGHVR3	47228.2	49475.4	45965.9
D3ZCI3	D3ZCI3	D3ZCI3_RAT	Arhgap30	Rho GTPase activating protein 30	1	GVGVHLEEGGLSEGPGVELLR	GVGVHLEEGGLSEGPGVELLR	3	GVGVHLEEGGLSEGPGVELLR3		5447.56	2602.62
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	GVHCQLPCPK	GVHC(UniMod:4)QLPC(UniMod:4)PK	3	GVHC(UniMod:4)QLPC(UniMod:4)PK3	169956	117867	167783
M0RCP6	M0RCP6	PROF3_RAT	Pfn3	Profilin-3	1	GVHGGILNK	GVHGGILNK	2	GVHGGILNK2	116913	68156.5	78849.8
P15473	P15473	IBP3_RAT	Igfbp3	Insulin-like growth factor-binding protein 3	1	GVHIPNCDK	GVHIPNC(UniMod:4)DK	2	GVHIPNC(UniMod:4)DK2	11134.9	9572.57	8526.9
P15473	P15473	IBP3_RAT	Igfbp3	Insulin-like growth factor-binding protein 3	1	GVHIPNCDKK	GVHIPNC(UniMod:4)DKK	3	GVHIPNC(UniMod:4)DKK3	17548	5757.23	6581.42
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	GVHIPVHQESSGCVQAEASYEGFK	GVHIPVHQESSGC(UniMod:4)VQAEASYEGFK	4	GVHIPVHQESSGC(UniMod:4)VQAEASYEGFK4	2897.92	5631.32	4806.12
A0A8I5ZWP3	A0A8I5ZWP3;Q9QYE7	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	0	GVHSLILGAPR	GVHSLILGAPR	2	GVHSLILGAPR2	11172.7	16973.3	9582
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	GVHVELAEEDDGEKPGLK	GVHVELAEEDDGEKPGLK	3	GVHVELAEEDDGEKPGLK3	3517.88	3451.31	
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	GVHVELAEEDDGEKPGLK	GVHVELAEEDDGEKPGLK	4	GVHVELAEEDDGEKPGLK4	17477.1	10543.7	17876.6
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	GVHYISVSAAR	GVHYISVSAAR	3	GVHYISVSAAR3	13036.9	9414.25	8077.75
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	GVIALCIEDGSIHR	GVIALC(UniMod:4)IEDGSIHR	2	GVIALC(UniMod:4)IEDGSIHR2		5187.64	
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	GVIALCIEDGSIHR	GVIALC(UniMod:4)IEDGSIHR	3	GVIALC(UniMod:4)IEDGSIHR3	19737.5	25817.7	31610.2
D4AD75	D4AD75	D4AD75_RAT	Dpy19l1	Dpy-19 like C-mannosyltransferase 1	1	GVIANQETDVR	GVIANQETDVR	2	GVIANQETDVR2	5724.32	665.616	7229.79
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	GVIASSVGTILK	GVIASSVGTILK	2	GVIASSVGTILK2	541985	663455	586209
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	GVIDLAALGITGR	GVIDLAALGITGR	2	GVIDLAALGITGR2	11544	10036.5	10097.9
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	GVIDLAEVEAVAPGTPTIGAPK	GVIDLAEVEAVAPGTPTIGAPK	3	GVIDLAEVEAVAPGTPTIGAPK3	3296.32	5345.68	4425.23
Q6IRE4	Q6IRE4	TS101_RAT	Tsg101	Tumor susceptibility gene 101 protein	1	GVIDLDVFLK	GVIDLDVFLK	2	GVIDLDVFLK2	16835.5	16475	16622.1
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	GVIDLIFEK	GVIDLIFEK	2	GVIDLIFEK2	37753.1	36647.5	37769.4
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	GVIDLVFEK	GVIDLVFEK	2	GVIDLVFEK2	4328.43	7401.33	6672.63
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	GVIDMGNSLIER	GVIDMGNSLIER	2	GVIDMGNSLIER2	363189	369761	400167
B2GUY0	B2GUY0	MA1B1_RAT	Man1b1	Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase	1	GVIEAFLHAWK	GVIEAFLHAWK	2	GVIEAFLHAWK2	59733	69495.2	
B2GUY0	B2GUY0	MA1B1_RAT	Man1b1	Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase	1	GVIEAFLHAWK	GVIEAFLHAWK	3	GVIEAFLHAWK3	6963.97	7292.94	5795.89
Q68FX0	Q68FX0	IDH3B_RAT	Idh3B	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	GVIECLK	GVIEC(UniMod:4)LK	2	GVIEC(UniMod:4)LK2	117137	93726.7	98231.8
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	GVIFTEAFVAR	GVIFTEAFVAR	2	GVIFTEAFVAR2	15726.8	15135.1	23002.7
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	GVIFYLR	GVIFYLR	2	GVIFYLR2	6884.77	10273.6	5593.28
O70351	O70351	HCD2_RAT	Hsd17b10	3-hydroxyacyl-CoA dehydrogenase type-2	1	GVIINTASVAAFEGQVGQAAYSASK	GVIINTASVAAFEGQVGQAAYSASK	3	GVIINTASVAAFEGQVGQAAYSASK3	25900.1	17130.5	17007.4
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	GVIIQGAR	GVIIQGAR	2	GVIIQGAR2	502679	510913	479492
Q9QWJ9	Q9QWJ9	NRP1_RAT	Nrp1	Neuropilin-1	1	GVIIQGGK	GVIIQGGK	2	GVIIQGGK2	38553.3	32534.3	45126.3
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	GVIISPPSCGK	GVIISPPSC(UniMod:4)GK	2	GVIISPPSC(UniMod:4)GK2	150977	155671	181570
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	GVILLIVDK	GVILLIVDK	2	GVILLIVDK2	8700.57	10889.3	13266.8
P23965	P23965	ECI1_RAT	Eci1	Enoyl-CoA delta isomerase 1, mitochondrial	1	GVILTSERPGIFSAGLDLMEMYGR	GVILTSERPGIFSAGLDLMEMYGR	3	GVILTSERPGIFSAGLDLMEMYGR3	26629.3	29671.9	26030.5
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	GVILYGPPGTGK	GVILYGPPGTGK	2	GVILYGPPGTGK2	217832	218854	190475
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	GVINDILDWK	GVINDILDWK	2	GVINDILDWK2	13799.6	12157.6	11393.6
Q63737	A0A8I6A6H0;P20942;Q63737	PHLP_RAT	Pdcl	Phosducin-like protein	0	GVINDWR	GVINDWR	2	GVINDWR2	41043.5	58421.4	58636.3
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	GVIPFIFQAK	GVIPFIFQAK	2	GVIPFIFQAK2	11773.9	16640.5	16704.8
Q6AYT3	Q6AYT3;A0A8I5YBA4	RTCB_RAT	Rtcb	RNA-splicing ligase RtcB homolog	0	GVIPMNAK	GVIPMNAK	2	GVIPMNAK2	30956.9	30746.6	29889
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	GVIPNSFAHIFGHIAK	GVIPNSFAHIFGHIAK	4	GVIPNSFAHIFGHIAK4	1622.17	5327.96	1621.45
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	GVIPNSFDHIFTHISR	GVIPNSFDHIFTHISR	3	GVIPNSFDHIFTHISR3	14220.4	18600.3	19969.8
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	GVIPNSFDHIFTHISR	GVIPNSFDHIFTHISR	4	GVIPNSFDHIFTHISR4	12819.6	6593.05	6172.99
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	GVIQAIQK	GVIQAIQK	1	GVIQAIQK1	3878.82	1663.95	0
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	GVIQAIQK	GVIQAIQK	2	GVIQAIQK2	786353	719430	693433
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	GVISTPVIR	GVISTPVIR	2	GVISTPVIR2	103594	113677	94766.1
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	GVISWGSGCGDR	GVISWGSGC(UniMod:4)GDR	2	GVISWGSGC(UniMod:4)GDR2	293689	294418	308076
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	GVIVDKDFSHPQMPK	GVIVDKDFSHPQMPK	2	GVIVDKDFSHPQMPK2	2722.12	3095.28	4438.04
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	GVIVDKDFSHPQMPK	GVIVDKDFSHPQMPK	3	GVIVDKDFSHPQMPK3	114673	110917	86785.1
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	GVIVDKDFSHPQMPK	GVIVDKDFSHPQMPK	4	GVIVDKDFSHPQMPK4	258195	276661	279697
D3ZDI7	D3ZDI7	D3ZDI7_RAT	Ppp2r5a	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	GVIVESAYSDIVK	GVIVESAYSDIVK	2	GVIVESAYSDIVK2	8510	13467.7	12189.3
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	GVKPSCTIIPLMK	GVKPSC(UniMod:4)TIIPLMK	3	GVKPSC(UniMod:4)TIIPLMK3	24660.7	20356.4	14903.6
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	GVKPSESITTK	GVKPSESITTK	2	GVKPSESITTK2	58350.7	229196	181270
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	GVKPSESITTK	GVKPSESITTK	3	GVKPSESITTK3	505092	228730	120856
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	GVKPVFSIGDEEEYDTDEIDSSSMSDDDRK	GVKPVFSIGDEEEYDTDEIDSSSMSDDDRK	4	GVKPVFSIGDEEEYDTDEIDSSSMSDDDRK4	9891.32	10415.5	9621.25
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	GVLADRESPEQPFVVLNK	GVLADRESPEQPFVVLNK	3	GVLADRESPEQPFVVLNK3	2776.41	8779.48	3497.75
Q5PPK9	Q5PPK9	EIPR1_RAT	Eipr1	EARP and GARP complex-interacting protein 1	1	GVLATCYNK	GVLATC(UniMod:4)YNK	2	GVLATC(UniMod:4)YNK2	37074.4	28954.6	30401.2
P0C5W1	P0C5W1	MAP1S_RAT	Map1s	Microtubule-associated protein 1S	1	GVLDALLAGK	GVLDALLAGK	2	GVLDALLAGK2	47080.7	41815.3	59042.1
A0A8I5ZSB0	A0A8I5ZSB0	A0A8I5ZSB0_RAT	Igtp	Interferon gamma induced GTPase	1	GVLDETAGK	GVLDETAGK	2	GVLDETAGK2	15479.1	22352.1	14495
A0A0G2K6R0	A0A0G2K6R0	A0A0G2K6R0_RAT	Tnrc6b	Trinucleotide repeat containing adaptor 6B	1	GVLEAEGSSSSAQVSTVGQASR	GVLEAEGSSSSAQVSTVGQASR	3	GVLEAEGSSSSAQVSTVGQASR3	2251.8		
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	GVLEDIQLNLFTR	GVLEDIQLNLFTR	2	GVLEDIQLNLFTR2	62762.1	52141.5	56245.8
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	GVLEDIQLNLFTR	GVLEDIQLNLFTR	3	GVLEDIQLNLFTR3	3519.15	1337.62	974.111
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	GVLEGFKK	GVLEGFKK	2	GVLEGFKK2	55340.3	51446.3	40982.8
Q9Z2P6	Q9Z2P6	SNP29_RAT	Snap29	Synaptosomal-associated protein 29	1	GVLEHTEK	GVLEHTEK	2	GVLEHTEK2	99227.3	82968.9	84311.6
Q63621	Q63621	IL1AP_RAT	Il1rap	Interleukin-1 receptor accessory protein	1	GVLENEFGYK	GVLENEFGYK	2	GVLENEFGYK2	9151.71		9798.53
F1LTE0	F1LTE0	TANC2_RAT	Tanc2	Protein TANC2	1	GVLEPLENLHK	GVLEPLENLHK	3	GVLEPLENLHK3	4513.9	3548.96	5721.91
Q6P4Z9	Q6P4Z9	CSN8_RAT	Cops8	COP9 signalosome complex subunit 8	1	GVLEQGWQADSTTR	GVLEQGWQADSTTR	2	GVLEQGWQADSTTR2	54103.5	66301.4	60519.3
Q8K4Y7	Q8K4Y7	CANT1_RAT	Cant1	Soluble calcium-activated nucleotidase 1	1	GVLESHLAEK	GVLESHLAEK	2	GVLESHLAEK2	6818.59		4585.48
F7EWF8	F7EWF8	F7EWF8_RAT	Anapc2	Anaphase-promoting complex subunit 2	1	GVLFFSTPR	GVLFFSTPR	2	GVLFFSTPR2	12614.2	8668.67	12269.3
Q9R063	Q9R063	PRDX5_RAT	Prdx5	Peroxiredoxin-5, mitochondrial	1	GVLFGVPGAFTPGCSK	GVLFGVPGAFTPGC(UniMod:4)SK	2	GVLFGVPGAFTPGC(UniMod:4)SK2	390927	375684	416074
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	GVLFHSGGK	GVLFHSGGK	2	GVLFHSGGK2	11624.8	7411.24	19111.3
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GVLFQPCER	GVLFQPC(UniMod:4)ER	2	GVLFQPC(UniMod:4)ER2	555641	669265	556426
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	GVLFYGPPGCGK	GVLFYGPPGC(UniMod:4)GK	2	GVLFYGPPGC(UniMod:4)GK2	1.22611e+06	1.26293e+06	1.64089e+06
P54777	P54777	PEX6_RAT	Pex6	Peroxisomal ATPase PEX6	1	GVLGGTGDALGVSR	GVLGGTGDALGVSR	2	GVLGGTGDALGVSR2	4192.53	2399.62	
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	GVLGVTAGAR	GVLGVTAGAR	2	GVLGVTAGAR2	21357.8	12368.9	17846.8
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	GVLHPGEK	GVLHPGEK	1	GVLHPGEK1		2806.14	2536.85
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	GVLHPGEK	GVLHPGEK	2	GVLHPGEK2	123231	100472	114163
B1WBY5	B1WBY5	B1WBY5_RAT	Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	1	GVLHQVMMPDSEALR	GVLHQVMMPDSEALR	2	GVLHQVMMPDSEALR2	2223.84	2229.17	1783.9
B1WBY5	B1WBY5	B1WBY5_RAT	Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	1	GVLHQVMMPDSEALR	GVLHQVMMPDSEALR	3	GVLHQVMMPDSEALR3	51548.3	48385.6	50576.9
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	GVLIAVLDTGVDPGAPGMQVTTDGKPK	GVLIAVLDTGVDPGAPGMQVTTDGKPK	3	GVLIAVLDTGVDPGAPGMQVTTDGKPK3	61583.1	53461.8	39128
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	GVLIAVLDTGVDPGAPGMQVTTDGKPK	GVLIAVLDTGVDPGAPGMQVTTDGKPK	4	GVLIAVLDTGVDPGAPGMQVTTDGKPK4	11843.8	6610.98	10752.8
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	GVLKDPEIAELFFK	GVLKDPEIAELFFK	2	GVLKDPEIAELFFK2	6449.2	8821.46	8516.68
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	GVLKDPEIAELFFK	GVLKDPEIAELFFK	3	GVLKDPEIAELFFK3	15036.6	16846.5	16848.7
A0A8I6AJP4	A0A8I6AJP4	A0A8I6AJP4_RAT	Phactr4	Phosphatase and actin regulator 4	1	GVLLEDPEQGGEDSGK	GVLLEDPEQGGEDSGK	2	GVLLEDPEQGGEDSGK2	3549.79	3055.31	
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	GVLLEIEDLQANQFK	GVLLEIEDLQANQFK	2	GVLLEIEDLQANQFK2	30839.6	22733.7	35013.4
Q9ESM0	Q9ESM0	IP6K1_RAT	Ip6k1	Inositol hexakisphosphate kinase 1	1	GVLLEPFIHQVGGHSSMMR	GVLLEPFIHQVGGHSSMMR	4	GVLLEPFIHQVGGHSSMMR4	4878.46	3915.19	11559.6
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	GVLLFGPPGTGK	GVLLFGPPGTGK	2	GVLLFGPPGTGK2	423339	421419	482194
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	GVLLGIDDLQTNQFK	GVLLGIDDLQTNQFK	2	GVLLGIDDLQTNQFK2	52358.7	83824.6	77414.7
Q9QZK8	Q9QZK8	DNS2A_RAT	Dnase2	Deoxyribonuclease-2-alpha	1	GVLLLDQEGGFWLVHSVPR	GVLLLDQEGGFWLVHSVPR	3	GVLLLDQEGGFWLVHSVPR3	3728.76		
Q5FVL8	Q5FVL8	Q5FVL8_RAT	Abcb10	ATP binding cassette subfamily B member 10	1	GVLLSGGQK	GVLLSGGQK	2	GVLLSGGQK2	20297.3	22465.2	19233.9
D3ZAI6	D3ZAI6	D3ZAI6_RAT	Nt5dc3	5'-nucleotidase domain containing 3	1	GVLLWDK	GVLLWDK	2	GVLLWDK2	25067.5	20082.9	29872.1
Q505J9	Q505J9	ATAD1_RAT	Atad1	Outer mitochondrial transmembrane helix translocase	1	GVLLYGPPGCGK	GVLLYGPPGC(UniMod:4)GK	2	GVLLYGPPGC(UniMod:4)GK2	45252.5	58151.4	56290.1
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	GVLLYGPPGTGK	GVLLYGPPGTGK	2	GVLLYGPPGTGK2	358777	371971	387991
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	GVLMYGPPGCGK	GVLMYGPPGC(UniMod:4)GK	2	GVLMYGPPGC(UniMod:4)GK2	145768	125679	138619
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	GVLMYGPPGTGK	GVLMYGPPGTGK	2	GVLMYGPPGTGK2	281098	228504	295483
P53678	P53678	AP3M2_RAT	Ap3m2	AP-3 complex subunit mu-2	1	GVLNMSLTPSQGTHTFDPVTK	GVLNMSLTPSQGTHTFDPVTK	3	GVLNMSLTPSQGTHTFDPVTK3	8818.02	4982.12	5438.39
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	GVLNNDQK	GVLNNDQK	1	GVLNNDQK1	47679.5	47051.2	47078.5
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	GVLNNDQK	GVLNNDQK	2	GVLNNDQK2	4.30807e+06	4.745e+06	5.03418e+06
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	GVLNNDQKDTDGDGK	GVLNNDQKDTDGDGK	3	GVLNNDQKDTDGDGK3		57553.2	
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	GVLNQHQFLEGPEGTGNAR	GVLNQHQFLEGPEGTGNAR	3	GVLNQHQFLEGPEGTGNAR3	414686	430715	479271
Q505J8	Q505J8	SYFA_RAT	Farsa	Phenylalanine--tRNA ligase alpha subunit	1	GVLPDSGHLHPLLK	GVLPDSGHLHPLLK	3	GVLPDSGHLHPLLK3	17233.3	10275.2	7895.34
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	GVLPFQAGSQK	GVLPFQAGSQK	2	GVLPFQAGSQK2	30736.5	41223.8	44418.7
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	GVLPYVGNLITK	GVLPYVGNLITK	2	GVLPYVGNLITK2	78521.3	71771.2	78351.9
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	GVLQGMNGR	GVLQGMNGR	2	GVLQGMNGR2	91391.7	90892.4	105779
O08770	O08770	GPV_RAT	Gp5	Platelet glycoprotein V	1	GVLQSHSFSGMTVLQR	GVLQSHSFSGMTVLQR	2	GVLQSHSFSGMTVLQR2	53622.8	51329.9	56678.9
O08770	O08770	GPV_RAT	Gp5	Platelet glycoprotein V	1	GVLQSHSFSGMTVLQR	GVLQSHSFSGMTVLQR	3	GVLQSHSFSGMTVLQR3	1.98595e+06	2.2249e+06	2.24856e+06
A0A8I5ZVI9	A0A8I5ZVI9	A0A8I5ZVI9_RAT	Ranbp3	RAN binding protein 3	1	GVLRPAVLQAPQPK	GVLRPAVLQAPQPK	3	GVLRPAVLQAPQPK3	48747.5	38759.7	38789.4
A0A8I5ZXD6	D4A5F0;A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	0	GVLSALTNAVQNTGK	GVLSALTNAVQNTGK	2	GVLSALTNAVQNTGK2	25483.7	21280.1	26499.8
A0A8I5ZXD6	D4A5F0;A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	0	GVLSALTNAVQNTGK	GVLSALTNAVQNTGK	3	GVLSALTNAVQNTGK3	13665.6	17616.4	17081.2
Q6PCT3	Q6PCT3	TPD54_RAT	Tpd52l2	Tumor protein D54	1	GVLSDFMTDVPVDPGVVHR	GVLSDFMTDVPVDPGVVHR	3	GVLSDFMTDVPVDPGVVHR3	30289.9	26243.2	
D4A0Z1	D4A0Z1	D4A0Z1_RAT	Tspan14	Tetraspanin	1	GVLSDLTK	GVLSDLTK	2	GVLSDLTK2	70748.8	47742.4	61283.5
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	GVLSGWMLNGIDLDR	GVLSGWMLNGIDLDR	2	GVLSGWMLNGIDLDR2	3.01359e+06	3.26402e+06	3.54116e+06
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	GVLSGWMLNGIDLDR	GVLSGWMLNGIDLDR	3	GVLSGWMLNGIDLDR3	99680	43985.8	37929.5
A0A8I6A263	A0A8I6A263	A0A8I6A263_RAT	Aimp1	Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	1	GVLSQAMVMCASSPEK	GVLSQAMVMC(UniMod:4)ASSPEK	2	GVLSQAMVMC(UniMod:4)ASSPEK2	14491.6	11680.1	12174.2
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	GVLSYLEPR	GVLSYLEPR	2	GVLSYLEPR2	94949.8	114350	98614.7
Q62881	Q62881	NOL3_RAT	Nol3	Nucleolar protein 3	1	GVLTGPEYEALDALPDAERR	GVLTGPEYEALDALPDAERR	3	GVLTGPEYEALDALPDAERR3	5093.99	7457.95	11364.8
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	GVLTNPNCEFEANYVAIHTLATWYK	GVLTNPNC(UniMod:4)EFEANYVAIHTLATWYK	3	GVLTNPNC(UniMod:4)EFEANYVAIHTLATWYK3	12082	17021.4	26961.6
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	GVLTQFR	GVLTQFR	2	GVLTQFR2	971987	970564	976490
Q9Z272	Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	1	GVLVCDECCSVHR	GVLVC(UniMod:4)DEC(UniMod:4)C(UniMod:4)SVHR	2	GVLVC(UniMod:4)DEC(UniMod:4)C(UniMod:4)SVHR2	3190.07		
Q9Z272	Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	1	GVLVCDECCSVHR	GVLVC(UniMod:4)DEC(UniMod:4)C(UniMod:4)SVHR	3	GVLVC(UniMod:4)DEC(UniMod:4)C(UniMod:4)SVHR3	20824.8	21672.1	25084.2
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	GVLVEEINTK	GVLVEEINTK	2	GVLVEEINTK2	109179	103875	112381
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	GVLYQTVSR	GVLYQTVSR	2	GVLYQTVSR2	53410.2	65624.5	49951.1
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	GVMECGICR	GVMEC(UniMod:4)GIC(UniMod:4)R	2	GVMEC(UniMod:4)GIC(UniMod:4)R2	287621	228981	257360
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	GVMEHLENQAQGFPEEFR	GVMEHLENQAQGFPEEFR	3	GVMEHLENQAQGFPEEFR3	20901.7		31108.6
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	GVMEHLENQAQGFPEEFRDSPDVTNR	GVMEHLENQAQGFPEEFRDSPDVTNR	4	GVMEHLENQAQGFPEEFRDSPDVTNR4	139842	149292	171341
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	GVMEQLR	GVMEQLR	2	GVMEQLR2	148242	130137	85941.3
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	GVMGGQSAGPQHTEAETIQK	GVMGGQSAGPQHTEAETIQK	3	GVMGGQSAGPQHTEAETIQK3	568704	703928	629210
P63039	A0A8I5ZVK6;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	GVMLAVDAVIAELK	GVMLAVDAVIAELK	2	GVMLAVDAVIAELK2	31789.1	23914.1	27909.9
P63039	A0A8I5ZVK6;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	GVMLAVDAVIAELK	GVMLAVDAVIAELK	3	GVMLAVDAVIAELK3	16870.1	17850.2	17259.4
P63039	A0A8I5ZVK6;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	GVMLAVDAVIAELKK	GVMLAVDAVIAELKK	2	GVMLAVDAVIAELKK2	46054.1	27391.5	13480.1
P63039	A0A8I5ZVK6;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	GVMLAVDAVIAELKK	GVMLAVDAVIAELKK	3	GVMLAVDAVIAELKK3	263269	203426	233101
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	GVMLTTTFLDDVK	GVMLTTTFLDDVK	2	GVMLTTTFLDDVK2	1.26942e+06	912764	868126
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	GVMLTTTFLDDVK	GVMLTTTFLDDVK	3	GVMLTTTFLDDVK3	21040.5	21113.7	14652.5
O35547	O35547	ACSL4_RAT	Acsl4	Long-chain-fatty-acid--CoA ligase 4	1	GVMMHHSNLIAGMTGQCER	GVMMHHSNLIAGMTGQC(UniMod:4)ER	4	GVMMHHSNLIAGMTGQC(UniMod:4)ER4	4547.14	6907.13	10707.7
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	GVMSLVNVR	GVMSLVNVR	2	GVMSLVNVR2	72015.9	70457.8	65299.9
Q66HA6	Q66HA6	ARL8B_RAT	Arl8b	ADP-ribosylation factor-like protein 8B	1	GVNAIVYMIDAADR	GVNAIVYMIDAADR	2	GVNAIVYMIDAADR2	41915	34879	38893.5
Q66HA6	Q66HA6	ARL8B_RAT	Arl8b	ADP-ribosylation factor-like protein 8B	1	GVNAIVYMIDAADR	GVNAIVYMIDAADR	3	GVNAIVYMIDAADR3	5066.86	5185.36	4374.53
Q66HA6	Q66HA6	ARL8B_RAT	Arl8b	ADP-ribosylation factor-like protein 8B	1	GVNAIVYMIDAADREK	GVNAIVYMIDAADREK	2	GVNAIVYMIDAADREK2	19077.7	19525.9	19108.9
Q66HA6	Q66HA6	ARL8B_RAT	Arl8b	ADP-ribosylation factor-like protein 8B	1	GVNAIVYMIDAADREK	GVNAIVYMIDAADREK	3	GVNAIVYMIDAADREK3	244315	218134	278343
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	GVNASAQK	GVNASAQK	2	GVNASAQK2			16833.3
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	GVNCIDYYSGGDKPYLISGADDR	GVNC(UniMod:4)IDYYSGGDKPYLISGADDR	3	GVNC(UniMod:4)IDYYSGGDKPYLISGADDR3	158793	152082	156106
A0A0G2K5L2	A0A0G2K5L2	GHC1_RAT	Slc25a22	Mitochondrial glutamate carrier 1	1	GVNEDTYSGFLDCAR	GVNEDTYSGFLDC(UniMod:4)AR	2	GVNEDTYSGFLDC(UniMod:4)AR2	3383.13	3108.88	2167.92
Q66HF6	Q66HF6	Q66HF6_RAT	Tinag	Tubulointerstitial nephritis antigen	1	GVNESDIEK	GVNESDIEK	2	GVNESDIEK2	17370.2	9721.11	13787.6
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	GVNETLVAQR	GVNETLVAQR	2	GVNETLVAQR2	5767.23	5967.59	4288.99
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	GVNFAEEPMR	GVNFAEEPMR	2	GVNFAEEPMR2	224936	294191	303170
Q5U2M6	Q5U2M6	DCAF8_RAT	Dcaf8	DDB1- and CUL4-associated factor 8	1	GVNFYGPK	GVNFYGPK	2	GVNFYGPK2	15480.8	16721.6	13785.1
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	GVNLPGAAVDLPAVSEK	GVNLPGAAVDLPAVSEK	2	GVNLPGAAVDLPAVSEK2	388212	251173	300789
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	GVNLPGAAVDLPAVSEK	GVNLPGAAVDLPAVSEK	3	GVNLPGAAVDLPAVSEK3	9681.56	1845.34	8017.15
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	GVNLPGAAVDLPAVSEKDIQDLK	GVNLPGAAVDLPAVSEKDIQDLK	3	GVNLPGAAVDLPAVSEKDIQDLK3	77827.9	69293.3	71986.3
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	GVNLQNK	GVNLQNK	2	GVNLQNK2	37329.5	46905.4	34901.4
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	GVNLSGGQK	GVNLSGGQK	1	GVNLSGGQK1	1714.64	345.75	
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	GVNLSGGQK	GVNLSGGQK	2	GVNLSGGQK2	32281	53123	40516.2
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	GVNNISVALK	GVNNISVALK	2	GVNNISVALK2	6606.3	9099.89	8423
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	GVNNSYIQR	GVNNSYIQR	2	GVNNSYIQR2	528929	545152	614015
Q02589	Q02589	ADPRH_RAT	Adprh	ADP-ribosylhydrolase ARH1	1	GVNPSNYEK	GVNPSNYEK	2	GVNPSNYEK2	13816	10351.3	14915.7
G3V8Y8	G3V8Y8	G3V8Y8_RAT	Hip1	Huntingtin interacting protein 1	1	GVNQATAAVVASTISGK	GVNQATAAVVASTISGK	2	GVNQATAAVVASTISGK2	4906.23	4173.22	6429.39
A0A0G2JWH3	A0A0G2JWH3	A0A0G2JWH3_RAT	Ncapd2	Condensin complex subunit 1	1	GVNQYVVQEVLPIK	GVNQYVVQEVLPIK	2	GVNQYVVQEVLPIK2	2464.02	1476.11	
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	GVNSCQQCLAVSPVCAWCSDESLPQNSPR	GVNSC(UniMod:4)QQC(UniMod:4)LAVSPVC(UniMod:4)AWC(UniMod:4)SDESLPQNSPR	4	GVNSC(UniMod:4)QQC(UniMod:4)LAVSPVC(UniMod:4)AWC(UniMod:4)SDESLPQNSPR4	543896	649409	690075
P29975	P29975	AQP1_RAT	Aqp1	Aquaporin-1	1	GVNSGQGLGIEIIGTLQLVLCVLATTDRR	GVNSGQGLGIEIIGTLQLVLC(UniMod:4)VLATTDRR	4	GVNSGQGLGIEIIGTLQLVLC(UniMod:4)VLATTDRR4		7490.3	
Q498R3	Q498R3	DJC10_RAT	Dnajc10	DnaJ homolog subfamily C member 10	1	GVNSYPSLFIFR	GVNSYPSLFIFR	2	GVNSYPSLFIFR2	15594.1		
Q5I0D7	Q5I0D7	PEPD_RAT	Pepd	Xaa-Pro dipeptidase	1	GVNTDSGNVCR	GVNTDSGNVC(UniMod:4)R	2	GVNTDSGNVC(UniMod:4)R2	1461.08	3063.82	1502.51
P34064	P34064	PSA5_RAT	Psma5	Proteasome subunit alpha type-5	1	GVNTFSPEGR	GVNTFSPEGR	2	GVNTFSPEGR2	2.45011e+06	2.60832e+06	2.6462e+06
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	GVNTYEAR	GVNTYEAR	2	GVNTYEAR2	2.65226e+06	1.89897e+06	1.84923e+06
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	GVNVSALSR	GVNVSALSR	2	GVNVSALSR2	88582.4	75765.5	73416.4
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	GVNWAAFHPTMPLIVSGADDR	GVNWAAFHPTMPLIVSGADDR	3	GVNWAAFHPTMPLIVSGADDR3	68609.5	88449.2	84249.3
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	GVPALIENDHHMNCIR	GVPALIENDHHMNC(UniMod:4)IR	3	GVPALIENDHHMNC(UniMod:4)IR3	7804.88	5426.72	
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	GVPALIENDHHMNCIR	GVPALIENDHHMNC(UniMod:4)IR	4	GVPALIENDHHMNC(UniMod:4)IR4	10877.8	3374.19	5116.06
M0RBL7	M0RBL7	M0RBL7_RAT	Tcaf2c	Protein FAM115C-like	1	GVPAYISVHR	GVPAYISVHR	2	GVPAYISVHR2	9242.72	8393.65	3907.01
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	GVPEAQVAQTALSGLVR	GVPEAQVAQTALSGLVR	3	GVPEAQVAQTALSGLVR3	15895.6	14842.1	19107.1
Q9WUD2	Q9WUD2	TRPV2_RAT	Trpv2	Transient receptor potential cation channel subfamily V member 2	1	GVPEELTGLLEYLR	GVPEELTGLLEYLR	2	GVPEELTGLLEYLR2	18422.4	17298.1	17707.4
B1PLB1	B1PLB1	B1PLB1_RAT	Cd34	CD34 molecule	1	GVPFTQGICLELSEASSCEEFK	GVPFTQGIC(UniMod:4)LELSEASSC(UniMod:4)EEFK	3	GVPFTQGIC(UniMod:4)LELSEASSC(UniMod:4)EEFK3	50704.1	57298.3	67184.1
B1PLB1	B1PLB1	B1PLB1_RAT	Cd34	CD34 molecule	1	GVPFTQGICLELSEASSCEEFKK	GVPFTQGIC(UniMod:4)LELSEASSC(UniMod:4)EEFKK	3	GVPFTQGIC(UniMod:4)LELSEASSC(UniMod:4)EEFKK3	29208.8	27320.2	27357.4
D4A3V6	D4A3V6	D4A3V6_RAT	Bloc1s3	Biogenesis of lysosome-related organelles complex 1 subunit 3	1	GVPGIEPEQDPGPR	GVPGIEPEQDPGPR	2	GVPGIEPEQDPGPR2	23878.3	17596.5	17758.6
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	GVPGSFLAR	GVPGSFLAR	2	GVPGSFLAR2	58736.9	85450.1	71959.7
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	GVPLEEMAR	GVPLEEMAR	2	GVPLEEMAR2	30943.9	46808.8	34534.8
Q6AYB2	Q6AYB2	Q6AYB2_RAT	Sphk2	Sphingosine kinase 2	1	GVPLSGDQEITPELLPR	GVPLSGDQEITPELLPR	2	GVPLSGDQEITPELLPR2	35446	30556.2	41093.1
Q6AYB2	Q6AYB2	Q6AYB2_RAT	Sphk2	Sphingosine kinase 2	1	GVPLSGDQEITPELLPR	GVPLSGDQEITPELLPR	3	GVPLSGDQEITPELLPR3	2520.7	3729.83	10024.5
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	GVPLVYEAFSWR	GVPLVYEAFSWR	2	GVPLVYEAFSWR2	114037	97201.4	97392.8
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	GVPLVYEAFSWR	GVPLVYEAFSWR	3	GVPLVYEAFSWR3	4891.2	6197.23	7400.86
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GVPQMIVQAIR	GVPQMIVQAIR	2	GVPQMIVQAIR2	1.02795e+06	1.12347e+06	1.07501e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	GVPQMIVQAIR	GVPQMIVQAIR	3	GVPQMIVQAIR3	51583.2	65668.2	55236.8
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	GVPSLTGR	GVPSLTGR	2	GVPSLTGR2	49606.1	46812.6	41567.2
F1LWZ3	F1LWZ3	F1LWZ3_RAT	Rhbdf2	Inactive rhomboid protein	1	GVPSSASPVSPDGVQIPLK	GVPSSASPVSPDGVQIPLK	2	GVPSSASPVSPDGVQIPLK2	7422.39	5503.28	
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	GVPTGFVLPIR	GVPTGFVLPIR	2	GVPTGFVLPIR2	14152.1	14778.7	16603.8
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	GVPTQAK	GVPTQAK	1	GVPTQAK1			10901.3
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	GVPVAEEVSALFAGELNPVAPK	GVPVAEEVSALFAGELNPVAPK	3	GVPVAEEVSALFAGELNPVAPK3	42596	36189.7	39830
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	GVPWNFTFNVK	GVPWNFTFNVK	2	GVPWNFTFNVK2	165744	201694	157230
Q03555	Q03555	GEPH_RAT	Gphn	Gephyrin	1	GVQCEEEEEEK	GVQC(UniMod:4)EEEEEEK	2	GVQC(UniMod:4)EEEEEEK2	2083.3	1222.68	1489.19
P67779	P67779;A0A8I5ZUY9	PHB1_RAT	Phb1	Prohibitin 1	0	GVQDIVVGEGTHFLIPWVQK	GVQDIVVGEGTHFLIPWVQK	3	GVQDIVVGEGTHFLIPWVQK3	8252.19	8556.18	5284.34
P67779	P67779;A0A8I5ZUY9	PHB1_RAT	Phb1	Prohibitin 1	0	GVQDIVVGEGTHFLIPWVQKPIIFDCR	GVQDIVVGEGTHFLIPWVQKPIIFDC(UniMod:4)R	4	GVQDIVVGEGTHFLIPWVQKPIIFDC(UniMod:4)R4	107447	103012	100027
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	GVQDQPGLHLFGR	GVQDQPGLHLFGR	3	GVQDQPGLHLFGR3	17004.8	14691.8	15443.1
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	GVQELAASSQQK	GVQELAASSQQK	2	GVQELAASSQQK2	48099.9	48605.7	47266.9
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	GVQFAPLSTCR	GVQFAPLSTC(UniMod:4)R	2	GVQFAPLSTC(UniMod:4)R2	44829.6	34252.6	40254.2
F1LM81	F1LM81	TM1L1_RAT	Tom1l1	TOM1-like protein 1	1	GVQFPPLDGEPETK	GVQFPPLDGEPETK	2	GVQFPPLDGEPETK2	1766.66	5308.05	3568.8
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	GVQGFQDYIEK	GVQGFQDYIEK	2	GVQGFQDYIEK2	44741.9	43775.4	33986.4
P62628	P62628	DLRB1_RAT	Dynlrb1	Dynein light chain roadblock-type 1	1	GVQGIIVVNTEGIPIK	GVQGIIVVNTEGIPIK	2	GVQGIIVVNTEGIPIK2	38035.7	19294.6	21279.7
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	GVQHPLR	GVQHPLR	2	GVQHPLR2			11982.3
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	GVQLQTHPNVDK	GVQLQTHPNVDK	2	GVQLQTHPNVDK2	2637.78		1111.62
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	GVQLQTHPNVDK	GVQLQTHPNVDK	3	GVQLQTHPNVDK3	35851	28963.9	23088.1
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	GVQLQTHPNVDKK	GVQLQTHPNVDKK	3	GVQLQTHPNVDKK3	38296.6	27326.7	25157.5
D4A164	D4A164	D4A164_RAT	Nebl	Nebulette	1	GVQPHVVEMDR	GVQPHVVEMDR	2	GVQPHVVEMDR2	9791.97	5150.88	5649.95
D4A164	D4A164	D4A164_RAT	Nebl	Nebulette	1	GVQPHVVEMDR	GVQPHVVEMDR	3	GVQPHVVEMDR3	25763.4	30338.1	35904.1
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	GVQPVSCPTT	GVQPVSC(UniMod:4)PTT	2	GVQPVSC(UniMod:4)PTT2	6761.31	10205.4	10619.8
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	GVQQLTR	GVQQLTR	2	GVQQLTR2	30502.4	32768.3	39907.2
Q62632	Q62632	FSTL1_RAT	Fstl1	Follistatin-related protein 1	1	GVQTHTEEEMTR	GVQTHTEEEMTR	2	GVQTHTEEEMTR2	5859.1	2985.27	4676.98
Q62632	Q62632	FSTL1_RAT	Fstl1	Follistatin-related protein 1	1	GVQTHTEEEMTR	GVQTHTEEEMTR	3	GVQTHTEEEMTR3	63380.4	69663.5	63629.4
Q62658	Q62658	FKB1A_RAT	Fkbp1a	Peptidyl-prolyl cis-trans isomerase FKBP1A	1	GVQVETISSGDGR	GVQVETISSGDGR	2	GVQVETISSGDGR2	87361.1	81833.9	82984.6
P05197	A0A8I6A3L6;P05197	EF2_RAT	Eef2	Elongation factor 2	0	GVQYLNEIK	GVQYLNEIK	2	GVQYLNEIK2	73598.7	88099.4	86965.5
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	GVQYLNEIKDSVVAGFQWATK	GVQYLNEIKDSVVAGFQWATK	3	GVQYLNEIKDSVVAGFQWATK3	18528.4	13942.8	23011.9
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	GVRDDEECAAPTGVVEK	GVRDDEEC(UniMod:4)AAPTGVVEK	2	GVRDDEEC(UniMod:4)AAPTGVVEK2	1481.49	2785.42	
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	GVRDDEECAAPTGVVEK	GVRDDEEC(UniMod:4)AAPTGVVEK	3	GVRDDEEC(UniMod:4)AAPTGVVEK3	60317.2	59974.6	45480.5
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	GVRPDPLQQWELVPIEVFEAR	GVRPDPLQQWELVPIEVFEAR	3	GVRPDPLQQWELVPIEVFEAR3	9310.62	5897.17	9043.16
P56522	P56522	ADRO_RAT	Fdxr	NADPH:adrenodoxin oxidoreductase, mitochondrial	1	GVRPVSFSDWEK	GVRPVSFSDWEK	3	GVRPVSFSDWEK3	5186.89	3095.86	3374.25
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	GVSAAAIDSEQEHLIR	GVSAAAIDSEQEHLIR	3	GVSAAAIDSEQEHLIR3	4664.32	14076.2	11406
Q6AXV4	Q6AXV4	SAM50_RAT	Samm50	Sorting and assembly machinery component 50 homolog	1	GVSAEYSFPLCK	GVSAEYSFPLC(UniMod:4)K	2	GVSAEYSFPLC(UniMod:4)K2	51306	64033.1	65725.2
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	GVSAIRER	GVSAIRER	2	GVSAIRER2	13759.8	1467.31	16506.9
D3ZPP2	D3ZPP2	D3ZPP2_RAT	Arl8a	ADP-ribosylation factor like GTPase 8A	1	GVSAIVYMVDAADQEK	GVSAIVYMVDAADQEK	2	GVSAIVYMVDAADQEK2	37341.9		35541.7
D3ZPP2	D3ZPP2	D3ZPP2_RAT	Arl8a	ADP-ribosylation factor like GTPase 8A	1	GVSAIVYMVDAADQEK	GVSAIVYMVDAADQEK	3	GVSAIVYMVDAADQEK3	35155.2	33982.1	39470.8
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	GVSDEDTDEEKETLK	GVSDEDTDEEKETLK	2	GVSDEDTDEEKETLK2	8696.4	875.408	7455.19
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	GVSDEDTDEEKETLK	GVSDEDTDEEKETLK	3	GVSDEDTDEEKETLK3	262767	303077	270467
Q9Z136	Q9Z136	TSC1_RAT	Tsc1	Hamartin	1	GVSFGSGQLPPYDHLFEVALPK	GVSFGSGQLPPYDHLFEVALPK	3	GVSFGSGQLPPYDHLFEVALPK3	11456.8	19948.8	11003.9
P62142	D3ZJU8;P62142	PP1B_RAT	Ppp1cb	Serine/threonine-protein phosphatase PP1-beta catalytic subunit	0	GVSFTFGADVVSK	GVSFTFGADVVSK	2	GVSFTFGADVVSK2	17854	17115.3	18865.9
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	GVSFYEVPPHLFAVADTVYR	GVSFYEVPPHLFAVADTVYR	3	GVSFYEVPPHLFAVADTVYR3	178276	217799	220375
D3ZE04	D3ZE04	D3ZE04_RAT	Col7a1	Collagen type VII alpha 1 chain	1	GVSGPEGK	GVSGPEGK	1	GVSGPEGK1	1588.87		
D3ZUC2	D3ZUC2	D3ZUC2_RAT	Mov10	RNA helicase	1	GVSLLPSDVK	GVSLLPSDVK	2	GVSLLPSDVK2	3783.71	3111.92	1742.62
Q63470	A0A8I5ZP97;Q63470	DYR1A_RAT	Dyrk1a	Dual specificity tyrosine-phosphorylation-regulated kinase 1A	0	GVSLNLTR	GVSLNLTR	2	GVSLNLTR2	11523.2	19747.4	23255.9
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	GVSLNRPFHPAPPFDCLWLCLYAK	GVSLNRPFHPAPPFDC(UniMod:4)LWLC(UniMod:4)LYAK	4	GVSLNRPFHPAPPFDC(UniMod:4)LWLC(UniMod:4)LYAK4		4759.56	3879.08
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	GVSLSNHHFYDESK	GVSLSNHHFYDESK	2	GVSLSNHHFYDESK2	1837.14	1749.99	
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	GVSLSNHHFYDESK	GVSLSNHHFYDESK	3	GVSLSNHHFYDESK3	88264	94808.4	112259
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	GVSLSNHHFYDESK	GVSLSNHHFYDESK	4	GVSLSNHHFYDESK4	61673.3	47086.1	66622.2
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	GVSPEPIHLK	GVSPEPIHLK	2	GVSPEPIHLK2	38846.6	26289.8	32531
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	GVSPSYPR	GVSPSYPR	2	GVSPSYPR2	5368.66	5771.63	5102.13
A0A0G2K2W2	A0A0G2K2W2	A0A0G2K2W2_RAT	Cmc4	Uncharacterized protein	1	GVSPVCAGWEK	GVSPVC(UniMod:4)AGWEK	2	GVSPVC(UniMod:4)AGWEK2	4113.96	2969.39	8793.4
Q5XFX0	Q5XFX0	TAGL2_RAT	Tagln2	Transgelin-2	1	GVSQPQPGR	GVSQPQPGR	1	GVSQPQPGR1	774.976		
Q5XFX0	Q5XFX0	TAGL2_RAT	Tagln2	Transgelin-2	1	GVSQPQPGR	GVSQPQPGR	2	GVSQPQPGR2	1.16817e+06		1.16e+06
Q5XFX0	Q5XFX0	TAGL2_RAT	Tagln2	Transgelin-2	1	GVSQPQPGRENFQNWLK	GVSQPQPGRENFQNWLK	3	GVSQPQPGRENFQNWLK3	24547.4	37992.2	48294.2
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	GVSSELAPAAEEEESK	GVSSELAPAAEEEESK	2	GVSSELAPAAEEEESK2	352147	325681	389383
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	GVSSELAPAAEEEESK	GVSSELAPAAEEEESK	3	GVSSELAPAAEEEESK3	19283.2	25603.8	23287
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	GVSSPDHIFLPIPNWEYK	GVSSPDHIFLPIPNWEYK	3	GVSSPDHIFLPIPNWEYK3	148425	134322	171019
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	GVSSVVGPNAVGASPGDK	GVSSVVGPNAVGASPGDK	2	GVSSVVGPNAVGASPGDK2	36111.4	42702.9	33277
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	GVSSVVGPNAVGASPGDKK	GVSSVVGPNAVGASPGDKK	3	GVSSVVGPNAVGASPGDKK3	8584.2	25051.2	17760.5
Q5PPL3	Q5PPL3	NSDHL_RAT	Nsdhl	Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating	1	GVSTVFHCASPPSNSNNK	GVSTVFHC(UniMod:4)ASPPSNSNNK	3	GVSTVFHC(UniMod:4)ASPPSNSNNK3	40868.4	55162.2	47819.4
A0A8I6GK77	A0A8I6GK77	A0A8I6GK77_RAT	Bcas3	BCAS3, microtubule associated cell migration factor	1	GVSTVIDAASGTFDR	GVSTVIDAASGTFDR	2	GVSTVIDAASGTFDR2	7117.29	3814.61	1821.33
O88994	O88994	MARC2_RAT	Mtarc2	Mitochondrial amidoxime reducing component 2	1	GVSVCETECTDMGLR	GVSVC(UniMod:4)ETEC(UniMod:4)TDMGLR	2	GVSVC(UniMod:4)ETEC(UniMod:4)TDMGLR2		4127.28	4188.96
A0A8I5ZS67	A0A8I5ZS67	A0A8I5ZS67_RAT	Gigyf2	GRB10 interacting GYF protein 2	1	GVSVPLVHEAMQK	GVSVPLVHEAMQK	3	GVSVPLVHEAMQK3	11430.1	14607.1	
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	GVSWDSSPEEPGPLLQK	GVSWDSSPEEPGPLLQK	2	GVSWDSSPEEPGPLLQK2	186476	152011	186165
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	GVSWDSSPEEPGPLLQK	GVSWDSSPEEPGPLLQK	3	GVSWDSSPEEPGPLLQK3	35939	48614.9	46412.5
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	GVSWSDPLPECVIAK	GVSWSDPLPEC(UniMod:4)VIAK	2	GVSWSDPLPEC(UniMod:4)VIAK2	27325.3	30443.5	40193.8
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	GVSWSDPLPECVIAK	GVSWSDPLPEC(UniMod:4)VIAK	3	GVSWSDPLPEC(UniMod:4)VIAK3	2.66184e+06	3.18911e+06	3.49366e+06
D3ZX21	D3ZX21	D3ZX21_RAT	Ap4e1	AP-4 complex subunit epsilon	1	GVTALSSK	GVTALSSK	2	GVTALSSK2	6863.11	10726.1	11017.1
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	GVTDMIKPDQVEGIQK	GVTDMIKPDQVEGIQK	3	GVTDMIKPDQVEGIQK3	8576.33	10633	7796.96
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	GVTEAIEK	GVTEAIEK	2	GVTEAIEK2	40460.6	50368.1	37842.9
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	GVTEAIQNFSFR	GVTEAIQNFSFR	2	GVTEAIQNFSFR2	39114.6	44463.5	45829.9
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	GVTEAIQNFSFR	GVTEAIQNFSFR	3	GVTEAIQNFSFR3	3474.64	3083.56	2010.46
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	GVTFAGDVGR	GVTFAGDVGR	2	GVTFAGDVGR2	14072.2	16970.1	24214.9
Q6MG61	Q6MG61	CLIC1_RAT	Clic1	Chloride intracellular channel protein 1	1	GVTFNVTTVDTK	GVTFNVTTVDTK	2	GVTFNVTTVDTK2	86398.8	68537	50387
Q6MG61	Q6MG61	CLIC1_RAT	Clic1	Chloride intracellular channel protein 1	1	GVTFNVTTVDTKR	GVTFNVTTVDTKR	3	GVTFNVTTVDTKR3	10589.4	10558.8	8899.96
F1MAF8	F1MAF8	F1MAF8_RAT	Atg2b	Autophagy related 2B	1	GVTGAVGEVLR	GVTGAVGEVLR	2	GVTGAVGEVLR2	3940.1	4480.15	2685.22
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	GVTGGSVAIVCPYNPK	GVTGGSVAIVC(UniMod:4)PYNPK	2	GVTGGSVAIVC(UniMod:4)PYNPK2	464165	465812	514129
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	GVTGGSVAIVCPYNPK	GVTGGSVAIVC(UniMod:4)PYNPK	3	GVTGGSVAIVC(UniMod:4)PYNPK3	17712.5	23127.9	16502
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	GVTGHEVCNYFWNVDVR	GVTGHEVC(UniMod:4)NYFWNVDVR	3	GVTGHEVC(UniMod:4)NYFWNVDVR3	23694.9	22682.9	15605.4
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GVTHLNISGLK	GVTHLNISGLK	2	GVTHLNISGLK2	9501.83		4493.86
Q5XIC1	Q5XIC1	GMPPA_RAT	Gmppa	Mannose-1-phosphate guanyltransferase alpha	1	GVTIGEGVR	GVTIGEGVR	2	GVTIGEGVR2	18220.3	15843.5	18515.5
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	GVTIIGPATVGGIKPGCFK	GVTIIGPATVGGIKPGC(UniMod:4)FK	3	GVTIIGPATVGGIKPGC(UniMod:4)FK3	78198.3	85596.2	73100.4
D3ZVN7	D3ZVN7	D3ZVN7_RAT	Ppox	Amine oxidase	1	GVTILSGQPACGLSLQPEGHWK	GVTILSGQPAC(UniMod:4)GLSLQPEGHWK	3	GVTILSGQPAC(UniMod:4)GLSLQPEGHWK3	16501.1	8786.75	7538.15
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	GVTIPNSGADTLGR	GVTIPNSGADTLGR	2	GVTIPNSGADTLGR2	12919.4	11718.4	16569.9
O54857	O54857	PTEN_RAT	Pten	Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN	1	GVTIPSQR	GVTIPSQR	2	GVTIPSQR2	44954.7	47640.4	47077.2
Q6AYU2	Q6AYU2	Q6AYU2_RAT	Pcbp2	Poly(rC) binding protein 2	1	GVTIPYRPKPSSSPVIFAGGQDR	GVTIPYRPKPSSSPVIFAGGQDR	4	GVTIPYRPKPSSSPVIFAGGQDR4	50162.6	39298.1	44961.7
A0A096MJF9	A0A096MJF9	A0A096MJF9_RAT	Tmem132e	Transmembrane protein 132E	1	GVTLLGTK	GVTLLGTK	1	GVTLLGTK1			1030.33
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	GVTMDVGMTK	GVTMDVGMTK	2	GVTMDVGMTK2		18826	21233.8
Q5FVI6	Q5FVI6	VATC1_RAT	Atp6v1c1	V-type proton ATPase subunit C 1	1	GVTQIDNDLK	GVTQIDNDLK	2	GVTQIDNDLK2	12534.9	20486.5	12704.4
D3ZD73	D3ZD73;A0A8I5Y7L2	D3ZD73_RAT	Ddx6	DEAD-box helicase 6	0	GVTQYYAYVTER	GVTQYYAYVTER	2	GVTQYYAYVTER2	9703	14054	10612.2
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	GVTSAVNIMHSSLQQGK	GVTSAVNIMHSSLQQGK	3	GVTSAVNIMHSSLQQGK3	24130.5	18444.8	27498.9
Q5U2Y0	Q5U2Y0	WIPI4_RAT	Wdr45	WD repeat domain phosphoinositide-interacting protein 4	1	GVTSLHFNQDQSCFCCAMETGVR	GVTSLHFNQDQSC(UniMod:4)FC(UniMod:4)C(UniMod:4)AMETGVR	3	GVTSLHFNQDQSC(UniMod:4)FC(UniMod:4)C(UniMod:4)AMETGVR3	2539.92	6629.49	
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	GVTSLPVPSVR	GVTSLPVPSVR	2	GVTSLPVPSVR2	865108	843915	815302
A0A8I6AEI3	A0A8I6AEI3	A0A8I6AEI3_RAT	Wwox	WW domain-containing oxidoreductase	1	GVTSNALHPGNMMFSAIHR	GVTSNALHPGNMMFSAIHR	4	GVTSNALHPGNMMFSAIHR4			7419.2
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	GVTSVSQIFHSPDLAIR	GVTSVSQIFHSPDLAIR	2	GVTSVSQIFHSPDLAIR2	850832	694800	625142
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	GVTSVSQIFHSPDLAIR	GVTSVSQIFHSPDLAIR	3	GVTSVSQIFHSPDLAIR3	25109.6	24827.2	34886.3
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	GVTSVSQIFHSPDLAIR	GVTSVSQIFHSPDLAIR	4	GVTSVSQIFHSPDLAIR4	263509	258791	271113
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	GVTTVTLPMIFNSSYLR	GVTTVTLPMIFNSSYLR	2	GVTTVTLPMIFNSSYLR2	12404.2	11793.8	21758.3
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GVTYNIIVEALHNQR	GVTYNIIVEALHNQR	2	GVTYNIIVEALHNQR2	237089	208778	166097
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GVTYNIIVEALHNQR	GVTYNIIVEALHNQR	3	GVTYNIIVEALHNQR3	659431	799922	659048
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GVTYNIIVEALHNQR	GVTYNIIVEALHNQR	4	GVTYNIIVEALHNQR4	327364	305568	279309
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GVTYNIIVEALHNQRR	GVTYNIIVEALHNQRR	3	GVTYNIIVEALHNQRR3	75050.7	60898.7	82244.2
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	GVTYNIIVEALHNQRR	GVTYNIIVEALHNQRR	4	GVTYNIIVEALHNQRR4	240333	233643	239882
D3ZRC4	D3ZRC4	PLPL8_RAT	Pnpla8	Calcium-independent phospholipase A2-gamma	1	GVVALQTLR	GVVALQTLR	2	GVVALQTLR2	14193.7	17865.6	12635.2
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	GVVDCKPGEASVFQQPK	GVVDC(UniMod:4)KPGEASVFQQPK	3	GVVDC(UniMod:4)KPGEASVFQQPK3	20206.2	20968.3	12520.2
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	GVVDSDDLPLNVSR	GVVDSDDLPLNVSR	2	GVVDSDDLPLNVSR2	5.04015e+06	6.11608e+06	5.81318e+06
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	GVVDSDDLPLNVSR	GVVDSDDLPLNVSR	3	GVVDSDDLPLNVSR3	96102.6	111940	99146.2
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	GVVDSEDIPLNLSR	GVVDSEDIPLNLSR	2	GVVDSEDIPLNLSR2	1.97475e+06	2.19735e+06	2.19542e+06
P34058	P82995;P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	GVVDSEDLPLNISR	GVVDSEDLPLNISR	3	GVVDSEDLPLNISR3	157835	201907	179072
A0A096MJT6	A0A096MJT6	A0A096MJT6_RAT	Bltp1	Similar to RIKEN cDNA D630029K19	1	GVVEETANNVDSSK	GVVEETANNVDSSK	2	GVVEETANNVDSSK2	2360.82		
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	GVVFNEMK	GVVFNEMK	2	GVVFNEMK2	27220.1	13767.7	30076.8
Q9Z0W7	Q9Z0W7	CLIC4_RAT	Clic4	Chloride intracellular channel protein 4	1	GVVFSVTTVDLK	GVVFSVTTVDLK	2	GVVFSVTTVDLK2	16982.5	14009.5	9844.8
P31652	P31652	SC6A4_RAT	Slc6a4	Sodium-dependent serotonin transporter	1	GVVFYLKPNWQK	GVVFYLKPNWQK	2	GVVFYLKPNWQK2	5162.66	4492.78	2239.58
P31652	P31652	SC6A4_RAT	Slc6a4	Sodium-dependent serotonin transporter	1	GVVFYLKPNWQK	GVVFYLKPNWQK	3	GVVFYLKPNWQK3	65656.9	86982.9	68697.2
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	GVVGGVTGIITKPVEGAK	GVVGGVTGIITKPVEGAK	3	GVVGGVTGIITKPVEGAK3	59011	63647.4	63144.5
O54947	O54947	HAVR1_RAT	Havcr1	Hepatitis A virus cellular receptor 1 homolog	1	GVVGHPVTIPCTYSTR	GVVGHPVTIPC(UniMod:4)TYSTR	3	GVVGHPVTIPC(UniMod:4)TYSTR3	5850.43	8169.5	16595.5
P02466	P02466	CO1A2_RAT	Col1a2	Collagen alpha-2(I) chain	1	GVVGPQGAR	GVVGPQGAR	2	GVVGPQGAR2	14301.4	20946.4	14358.5
P38062	P38062	MAP2_RAT	Metap2	Methionine aminopeptidase 2	1	GVVHDDMECSHYMK	GVVHDDMEC(UniMod:4)SHYMK	3	GVVHDDMEC(UniMod:4)SHYMK3	9254.42	5623.46	
P38062	P38062	MAP2_RAT	Metap2	Methionine aminopeptidase 2	1	GVVHDDMECSHYMK	GVVHDDMEC(UniMod:4)SHYMK	4	GVVHDDMEC(UniMod:4)SHYMK4	4583.73	4379.05	1461.26
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	GVVHHEKETFLDPFVLR	GVVHHEKETFLDPFVLR	3	GVVHHEKETFLDPFVLR3	28251.8	47111.5	38583.1
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	GVVHHEKETFLDPFVLR	GVVHHEKETFLDPFVLR	4	GVVHHEKETFLDPFVLR4	135416	158407	149281
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	GVVHVYTR	GVVHVYTR	2	GVVHVYTR2	41178.7	36003.5	33090.8
Q5RJM1	Q5RJM1	PORED_RAT	Srd5a3	Polyprenol reductase	1	GVVIHCQHR	GVVIHC(UniMod:4)QHR	2	GVVIHC(UniMod:4)QHR2			2283.12
F7FLB2	F7FLB2	F7FLB2_RAT	Pgm2	phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	1	GVVISFDGR	GVVISFDGR	2	GVVISFDGR2	31468.2	31804.5	19310.6
E9PT51	E9PT51	E9PT51_RAT	Poldip2	DNA polymerase delta interacting protein 2	1	GVVLFPWQAR	GVVLFPWQAR	2	GVVLFPWQAR2	4731.85	7598.34	7091.45
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	GVVMLNR	GVVMLNR	2	GVVMLNR2	297687	235528	239619
F1LNH3	F1LNH3	F1LNH3_RAT	Col6a2	Collagen type VI alpha 2 chain	1	GVVNFAVVITDGHVTGNPCGGIK	GVVNFAVVITDGHVTGNPC(UniMod:4)GGIK	3	GVVNFAVVITDGHVTGNPC(UniMod:4)GGIK3	4718.18	8126.98	2462.44
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	GVVNILPGSGSLVGQR	GVVNILPGSGSLVGQR	2	GVVNILPGSGSLVGQR2	26998.6	22047.4	27080.3
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	GVVPDDAVETLAR	GVVPDDAVETLAR	2	GVVPDDAVETLAR2	42180.2	59289	55205.7
Q8CHM7	Q8CHM7	HACL1_RAT	Hacl1	2-hydroxyacyl-CoA lyase 1	1	GVVPDNHPNCVGAAR	GVVPDNHPNC(UniMod:4)VGAAR	3	GVVPDNHPNC(UniMod:4)VGAAR3	32905.2	27006.7	35111.6
P05065	P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	1	GVVPLAGTNGETTTQGLDGLSER	GVVPLAGTNGETTTQGLDGLSER	3	GVVPLAGTNGETTTQGLDGLSER3	127842	112878	117022
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	GVVQDLQQAISK	GVVQDLQQAISK	2	GVVQDLQQAISK2	1.08043e+06	1.07511e+06	1.2381e+06
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	GVVQDLQQAISK	GVVQDLQQAISK	3	GVVQDLQQAISK3	4978.91	7074.07	7020.84
Q9EQT5	Q9EQT5	TINAL_RAT	Tinagl1	Tubulointerstitial nephritis antigen-like	1	GVVSDNCYPFSGR	GVVSDNC(UniMod:4)YPFSGR	2	GVVSDNC(UniMod:4)YPFSGR2	1728.77	7115.61	6712.07
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	GVVSFPIR	GVVSFPIR	1	GVVSFPIR1	6045		5922.79
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	GVVSFPIR	GVVSFPIR	2	GVVSFPIR2	1.47127e+07	1.37063e+07	1.31046e+07
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	GVVSFPIRVEPGMAPVAK	GVVSFPIRVEPGMAPVAK	2	GVVSFPIRVEPGMAPVAK2	33290.4	52191.5	38809.2
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	GVVSFPIRVEPGMAPVAK	GVVSFPIRVEPGMAPVAK	3	GVVSFPIRVEPGMAPVAK3	1.09129e+06	1.54697e+06	1.60632e+06
Q2PWT8	Q2PWT8	AP4M1_RAT	Ap4m1	AP-4 complex subunit mu-1	1	GVVSLSQELSSPDQK	GVVSLSQELSSPDQK	2	GVVSLSQELSSPDQK2	2823.74	1493.82	5798.64
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	GVVSSWACSFSTK	GVVSSWAC(UniMod:4)SFSTK	2	GVVSSWAC(UniMod:4)SFSTK2	23773.1	29125.1	35118.6
G3V6K3	G3V6K3	G3V6K3_RAT	Exosc7	Exosome component 7	1	GVVTCMR	GVVTC(UniMod:4)MR	2	GVVTC(UniMod:4)MR2	10987.5	8975.28	5892.36
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	GVVTTGQR	GVVTTGQR	2	GVVTTGQR2		6205.16	10182.1
M0RCP2	M0RCP2	M0RCP2_RAT	Sh3pxd2b	SH3 and PX domains 2B	1	GVVVEVIQK	GVVVEVIQK	2	GVVVEVIQK2	5453.84	5370.59	2217.85
P82450	P82450	SIAE_RAT	Siae	Sialate O-acetylesterase	1	GVVWYQGENNANYNR	GVVWYQGENNANYNR	2	GVVWYQGENNANYNR2	5194.59	2995.72	4533.51
D3ZSN4	D3ZSN4	D3ZSN4_RAT	Zfp330	Zinc finger protein 330	1	GVWDHGGR	GVWDHGGR	2	GVWDHGGR2	11476.9	15810.1	9177.86
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	GVWSELSK	GVWSELSK	1	GVWSELSK1	5810.5	8005.16	
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	GVWSELSK	GVWSELSK	2	GVWSELSK2	367619	478434	446262
P70619	P70619	GSHR_RAT	Gsr	Glutathione reductase (Fragment)	1	GVYAVGDVCGK	GVYAVGDVC(UniMod:4)GK	2	GVYAVGDVC(UniMod:4)GK2	60679.3	40626.2	51969.4
A0A0G2JZP9	A0A0G2JZP9	A0A0G2JZP9_RAT	Rnf11	Ring finger protein 11-like 1	1	GVYDPGR	GVYDPGR	2	GVYDPGR2	143134	123697	128312
A0A0G2JZP9	A0A0G2JZP9	A0A0G2JZP9_RAT	Rnf11	Ring finger protein 11-like 1	1	GVYDPGRDGSEK	GVYDPGRDGSEK	3	GVYDPGRDGSEK3	46421.7	57807.2	68393.8
P08650	P08650	CO5_RAT	C5	Complement C5	1	GVYGIVNR	GVYGIVNR	2	GVYGIVNR2	1.53891e+06	1.09792e+06	1.14114e+06
Q6AY30	Q6AY30	SCPDL_RAT	Sccpdh	Saccharopine dehydrogenase-like oxidoreductase	1	GVYIIGSSGFDSIPADLGVLYTR	GVYIIGSSGFDSIPADLGVLYTR	3	GVYIIGSSGFDSIPADLGVLYTR3	14795.7	13252.3	16959
A0A8I6APH2	A0A8I6APH2	A0A8I6APH2_RAT	Tgfbrap1	Transforming growth factor, beta receptor associated protein 1	1	GVYILVPLPLEK	GVYILVPLPLEK	2	GVYILVPLPLEK2	4611.49	6218.42	1671.41
B2RZ68	B2RZ68	B2RZ68_RAT	Dcaf7	DDB1 and CUL4 associated factor 7	1	GVYPDLLATSGDYLR	GVYPDLLATSGDYLR	2	GVYPDLLATSGDYLR2	8803.82	9018.56	10808.5
D4A9N5	D4A9N5	D4A9N5_RAT	Trim25	Tripartite motif-containing 25	1	GVYQGALDLK	GVYQGALDLK	2	GVYQGALDLK2	11832.5	9240.24	9530.46
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	GVYQISR	GVYQISR	2	GVYQISR2	157358	147746	158482
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	GVYSEETLR	GVYSEETLR	2	GVYSEETLR2	128867	135501	172455
P12007	P12007	IVD_RAT	Ivd	Isovaleryl-CoA dehydrogenase, mitochondrial	1	GVYVLMSGLDLER	GVYVLMSGLDLER	2	GVYVLMSGLDLER2			4337.01
D4AB17	D4AB17	D4AB17_RAT	Pfas	phosphoribosylformylglycinamidine synthase	1	GWAAAVTFNPQAR	GWAAAVTFNPQAR	2	GWAAAVTFNPQAR2	1594.6	5995.78	4292.12
E9PU02	E9PU02	E9PU02_RAT	Trappc9	Trafficking protein particle complex subunit 9	1	GWAAVQMR	GWAAVQMR	2	GWAAVQMR2	8584		16631.4
Q4V7F2	Q4V7F2	CREL1_RAT	Creld1	Protein disulfide isomerase Creld1	1	GWALHHLK	GWALHHLK	2	GWALHHLK2	2732.48	2233.11	2887.06
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	GWAPGSVLIYSCPLGR	GWAPGSVLIYSC(UniMod:4)PLGR	2	GWAPGSVLIYSC(UniMod:4)PLGR2	33233.9	31988.9	29758.3
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	GWAPGSVLIYSCPLGR	GWAPGSVLIYSC(UniMod:4)PLGR	3	GWAPGSVLIYSC(UniMod:4)PLGR3	6014.09	7031.55	6760.82
P48032	P48032	TIMP3_RAT	Timp3	Metalloproteinase inhibitor 3	1	GWAPPDK	GWAPPDK	1	GWAPPDK1	59126.5	54770.7	58747.9
P48032	P48032	TIMP3_RAT	Timp3	Metalloproteinase inhibitor 3	1	GWAPPDK	GWAPPDK	2	GWAPPDK2	2.52562e+06	2.73986e+06	2.6411e+06
P16036	P16036	S25A3_RAT	Slc25a3	Solute carrier family 25 member 3	1	GWAPTLIGYSMQGLCK	GWAPTLIGYSMQGLC(UniMod:4)K	2	GWAPTLIGYSMQGLC(UniMod:4)K2	95872.7	89505.5	90674
P16036	P16036	S25A3_RAT	Slc25a3	Solute carrier family 25 member 3	1	GWAPTLIGYSMQGLCK	GWAPTLIGYSMQGLC(UniMod:4)K	3	GWAPTLIGYSMQGLC(UniMod:4)K3	59945.9	54187	62191.3
A0A8I6AJW1	A0A8I6AJW1	A0A8I6AJW1_RAT	Rnf121	Ring finger protein 121	1	GWCIVGK	GWC(UniMod:4)IVGK	2	GWC(UniMod:4)IVGK2	19141.6	18844.4	21630.2
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	GWDDLFNK	GWDDLFNK	2	GWDDLFNK2	63330.8	71111.9	73112.5
G3V6L9	G3V6L9	G3V6L9_RAT	Fkbp3	peptidylprolyl isomerase	1	GWDEALLTMSK	GWDEALLTMSK	2	GWDEALLTMSK2	7995.83	6543.76	7886.79
G3V728	G3V728	G3V728_RAT	Nipsnap1	Nipsnap homolog 1	1	GWDENVYYTVPLVR	GWDENVYYTVPLVR	2	GWDENVYYTVPLVR2	7134.68	12030.3	9880.9
G3V728	G3V728	G3V728_RAT	Nipsnap1	Nipsnap homolog 1	1	GWDENVYYTVPLVR	GWDENVYYTVPLVR	3	GWDENVYYTVPLVR3	6464.43	3766.33	2256.05
A0A8I6GH88	A0A8I6GH88;A0A8I5ZVA3	A0A8I6GH88_RAT	Fkbp2	peptidylprolyl isomerase	0	GWDQGLLGMCEGEK	GWDQGLLGMC(UniMod:4)EGEK	2	GWDQGLLGMC(UniMod:4)EGEK2	19542.7	14388.9	14553.9
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GWDTLYWTSYTTSTITR	GWDTLYWTSYTTSTITR	3	GWDTLYWTSYTTSTITR3	4998.51	5179.04	4751.39
Q62658	Q62658	FKB1A_RAT	Fkbp1a	Peptidyl-prolyl cis-trans isomerase FKBP1A	1	GWEEGVAQMSVGQR	GWEEGVAQMSVGQR	2	GWEEGVAQMSVGQR2	25653	26707.8	30428
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	GWENHVEGQK	GWENHVEGQK	2	GWENHVEGQK2	16089.5	15439.9	19419.2
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	GWENHVEGQK	GWENHVEGQK	3	GWENHVEGQK3	304722	436477	331324
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	GWEPEVPCLK	GWEPEVPC(UniMod:4)LK	2	GWEPEVPC(UniMod:4)LK2	1.14937e+06	1.00165e+06	947030
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	GWFEPLVEDMQR	GWFEPLVEDMQR	2	GWFEPLVEDMQR2	565562	701800	577534
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	GWFEPLVEDMQR	GWFEPLVEDMQR	3	GWFEPLVEDMQR3	1.50565e+07	1.645e+07	1.58359e+07
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	GWFVYQR	GWFVYQR	2	GWFVYQR2	16751.3	16484.9	22845.5
Q6AYT7	Q6AYT7	ABD12_RAT	Abhd12	Lysophosphatidylserine lipase ABHD12	1	GWGDSVGTPSER	GWGDSVGTPSER	2	GWGDSVGTPSER2	8963.6	21020.1	6513.97
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	GWGEDEPDEESHTPLPPPMK	GWGEDEPDEESHTPLPPPMK	3	GWGEDEPDEESHTPLPPPMK3	73139.2	94640	74614.2
B5DEY9	D4A5Z0;B5DEY9	B5DEY9_RAT	Csgalnact1	Hexosyltransferase	0	GWGGEDVHLYR	GWGGEDVHLYR	3	GWGGEDVHLYR3	20886.9	18337.6	29680.3
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	GWGHQCELCPLPGTAQYK	GWGHQC(UniMod:4)ELC(UniMod:4)PLPGTAQYK	3	GWGHQC(UniMod:4)ELC(UniMod:4)PLPGTAQYK3	6197.49	6610.55	7818.08
Q1EHB3	Q1EHB3	ATS7_RAT	Adamts7	A disintegrin and metalloproteinase with thrombospondin motifs 7	1	GWGLCLDDRPSK	GWGLC(UniMod:4)LDDRPSK	3	GWGLC(UniMod:4)LDDRPSK3			3312.67
D4A3T4	D4A3T4	D4A3T4_RAT	Zfyve1	Zinc finger FYVE-type containing 1	1	GWGPAPVR	GWGPAPVR	2	GWGPAPVR2	6898.11	6206.22	5111.53
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	GWGPHCEICPFEGTVAYK	GWGPHC(UniMod:4)EIC(UniMod:4)PFEGTVAYK	3	GWGPHC(UniMod:4)EIC(UniMod:4)PFEGTVAYK3	60175.7	59448.3	57198.7
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	GWGSPEATSLVLNNLMYMTAK	GWGSPEATSLVLNNLMYMTAK	3	GWGSPEATSLVLNNLMYMTAK3	1663.97		2044.21
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	GWHTILIVEK	GWHTILIVEK	3	GWHTILIVEK3	24707.8	14095	31621.6
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	GWHWVGAHTLGYNSR	GWHWVGAHTLGYNSR	2	GWHWVGAHTLGYNSR2	4226.9	5111.1	4513.84
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	GWHWVGAHTLGYNSR	GWHWVGAHTLGYNSR	3	GWHWVGAHTLGYNSR3	27235.6	39254.8	18046.9
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	GWHWVGAHTLGYNSR	GWHWVGAHTLGYNSR	4	GWHWVGAHTLGYNSR4	47162.5	61382.6	46267.9
A0A8I6G5Q1	A0A8I6G5Q1	A0A8I6G5Q1_RAT	Sema4d	Semaphorin 4D	1	GWIQDMSGDTSSCLDK	GWIQDMSGDTSSC(UniMod:4)LDK	2	GWIQDMSGDTSSC(UniMod:4)LDK2	6029.39	7806.18	2292.67
D3ZJR7	D3ZJR7	D3ZJR7_RAT	Dsc2	Desmocollin 2	1	GWITVNEDSGSITIFR	GWITVNEDSGSITIFR	2	GWITVNEDSGSITIFR2	32432.3	29716.9	24792.6
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	GWLEAVEEPTQTGR	GWLEAVEEPTQTGR	2	GWLEAVEEPTQTGR2	63485.7	67719.9	54254.8
Q925N6	Q925N6	IGSF1_RAT	Igsf1	Immunoglobulin superfamily member 1	1	GWLEGLGFALYK	GWLEGLGFALYK	2	GWLEGLGFALYK2	7229.08	5596.03	
Q5M824	Q5M824	SHC1_RAT	Shc1	SHC-transforming protein 1	1	GWLHPNDK	GWLHPNDK	2	GWLHPNDK2	3544.72	3030.27	
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	GWLRDPNASPGDAGEQAIR	GWLRDPNASPGDAGEQAIR	3	GWLRDPNASPGDAGEQAIR3	844758	859888	924844
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	GWLSHNCDHQEDAGVICSGTDSGLAVR	GWLSHNC(UniMod:4)DHQEDAGVIC(UniMod:4)SGTDSGLAVR	4	GWLSHNC(UniMod:4)DHQEDAGVIC(UniMod:4)SGTDSGLAVR4	1.05322e+07	1.49502e+07	1.22496e+07
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	GWLSHNCDHQEDAGVICSGTDSVLAVR	GWLSHNC(UniMod:4)DHQEDAGVIC(UniMod:4)SGTDSVLAVR	4	GWLSHNC(UniMod:4)DHQEDAGVIC(UniMod:4)SGTDSVLAVR4	67524.1	91312.7	86490.7
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	GWLTINNISLMK	GWLTINNISLMK	2	GWLTINNISLMK2	16821	19996.5	27824.1
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	GWLVDLLNK	GWLVDLLNK	2	GWLVDLLNK2	74348	85504.5	70706
P06759	P06759	APOC3_RAT	Apoc3	Apolipoprotein C-III	1	GWMDNRFK	GWMDNRFK	2	GWMDNRFK2	128077	147591	140939
G3V9L1	G3V9L1	G3V9L1_RAT	Tex2	Testis expressed 2	1	GWMNEIYSYDPETYHATLTHSVFVR	GWMNEIYSYDPETYHATLTHSVFVR	4	GWMNEIYSYDPETYHATLTHSVFVR4	12907	10930.2	
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	GWMSILDEPGEWK	GWMSILDEPGEWK	2	GWMSILDEPGEWK2	3699.34	3209.84	7410.72
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	GWMSILDEPGEWKK	GWMSILDEPGEWKK	3	GWMSILDEPGEWKK3	9785.03	18507.9	28114.9
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	GWNGQCLDVDECLQPK	GWNGQC(UniMod:4)LDVDEC(UniMod:4)LQPK	2	GWNGQC(UniMod:4)LDVDEC(UniMod:4)LQPK2	111610	113569	95357.1
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	GWNGQCLDVDECLQPK	GWNGQC(UniMod:4)LDVDEC(UniMod:4)LQPK	3	GWNGQC(UniMod:4)LDVDEC(UniMod:4)LQPK3	18110.9	42057.6	15405.1
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	GWNILTNSEK	GWNILTNSEK	2	GWNILTNSEK2	99483.9	98277.8	112666
Q569B7	Q569B7	RWDD4_RAT	Rwdd4	RWD domain-containing protein 4	1	GWNWVDVVK	GWNWVDVVK	2	GWNWVDVVK2	26905.9	24353.6	27508.6
Q80Z29	Q80Z29	NAMPT_RAT	Nampt	Nicotinamide phosphoribosyltransferase	1	GWNYILEK	GWNYILEK	2	GWNYILEK2	14975.7	9267.33	8357.24
P41562	P41562	IDHC_RAT	Idh1	Isocitrate dehydrogenase [NADP] cytoplasmic	1	GWPLYLSTK	GWPLYLSTK	2	GWPLYLSTK2	38971.6	42172.8	40231.9
Q5U2Q4	Q5U2Q4	PAR16_RAT	Parp16	Protein mono-ADP-ribosyltransferase PARP16	1	GWQHSLLGQTLSCVAVCEVIDHPDVK	GWQHSLLGQTLSC(UniMod:4)VAVC(UniMod:4)EVIDHPDVK	4	GWQHSLLGQTLSC(UniMod:4)VAVC(UniMod:4)EVIDHPDVK4	5021.7	4183.13	4233.79
B5DF57	B5DF57	B5DF57_RAT	Epb42	protein-glutamine gamma-glutamyltransferase	1	GWSAAVVER	GWSAAVVER	2	GWSAAVVER2		10650.7	6638.11
D3ZP82	D3ZP82	D3ZP82_RAT	Loxl3	Lysyl oxidase homolog	1	GWSAHNSHVVCGMLGFPGEK	GWSAHNSHVVC(UniMod:4)GMLGFPGEK	4	GWSAHNSHVVC(UniMod:4)GMLGFPGEK4		10375.6	11718
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	GWSLAEDHINFTIGR	GWSLAEDHINFTIGR	3	GWSLAEDHINFTIGR3		22615	14088.6
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	GWVIHPLGLYNHFPK	GWVIHPLGLYNHFPK	4	GWVIHPLGLYNHFPK4	10863.7	16108.2	6029.19
Q6AYT0	Q6AYT0	QOR_RAT	Cryz	Quinone oxidoreductase	1	GWVKPVIGSEYPLEK	GWVKPVIGSEYPLEK	3	GWVKPVIGSEYPLEK3	4436.79		5210.96
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	GWVNTLVGGQK	GWVNTLVGGQK	2	GWVNTLVGGQK2	19452.9	16752	13808.8
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	GWWYAHFDGPWIAR	GWWYAHFDGPWIAR	2	GWWYAHFDGPWIAR2		2665.06	3043.49
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	GWWYAHFDGPWIAR	GWWYAHFDGPWIAR	3	GWWYAHFDGPWIAR3	20035.6	18061.5	16588.5
Q5M8C6	Q5M8C6	FGL1_RAT	Fgl1	Fibrinogen-like protein 1	1	GWWYSLK	GWWYSLK	2	GWWYSLK2	24701.4	27531.2	14661.3
Q6P686	Q6P686	OSTF1_RAT	Ostf1	Osteoclast-stimulating factor 1	1	GYADIVQLLLAK	GYADIVQLLLAK	2	GYADIVQLLLAK2	133824	91701.4	130006
Q6P686	Q6P686	OSTF1_RAT	Ostf1	Osteoclast-stimulating factor 1	1	GYADIVQLLLAK	GYADIVQLLLAK	3	GYADIVQLLLAK3	9487.28	7579.03	7841.41
Q9QWE9	Q9QWE9	GGT5_RAT	Ggt5	Glutathione hydrolase 5 proenzyme	1	GYAEAHR	GYAEAHR	2	GYAEAHR2			21479.6
Q5M7U6	Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	1	GYAFNHSADFETVR	GYAFNHSADFETVR	2	GYAFNHSADFETVR2	27746.1	29193.7	26455.2
Q5M7U6	Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	1	GYAFNHSADFETVR	GYAFNHSADFETVR	3	GYAFNHSADFETVR3	542699	493250	568077
Q7TP47	Q7TP47	HNRPQ_RAT	Syncrip	Heterogeneous nuclear ribonucleoprotein Q	1	GYAFVTFCTK	GYAFVTFC(UniMod:4)TK	2	GYAFVTFC(UniMod:4)TK2	18673.6	15594.6	18372.4
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	GYAICQTTR	GYAIC(UniMod:4)QTTR	2	GYAIC(UniMod:4)QTTR2		3367.83	4730.31
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	GYAICQTTRPLSWVECR	GYAIC(UniMod:4)QTTRPLSWVEC(UniMod:4)R	3	GYAIC(UniMod:4)QTTRPLSWVEC(UniMod:4)R3	16958	6379.03	10426.7
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	GYAIGYGIGSPHAQTIK	GYAIGYGIGSPHAQTIK	2	GYAIGYGIGSPHAQTIK2	32583.4	36799.7	31744
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	GYAIGYGIGSPHAQTIK	GYAIGYGIGSPHAQTIK	3	GYAIGYGIGSPHAQTIK3	64091.6	75281.1	63689.3
D3ZGW2	D3ZGW2	D3ZGW2_RAT	Ap1g2	AP-1 complex subunit gamma	1	GYAITALMK	GYAITALMK	2	GYAITALMK2	57342.7	70990.3	58816
A0A8I6ARU6	A0A8I6ARU6	A0A8I6ARU6_RAT	Galk1	Galactokinase 1	1	GYALLIDCR	GYALLIDC(UniMod:4)R	2	GYALLIDC(UniMod:4)R2	15252.7		12722.2
Q920F5	Q920F5	DCMC_RAT	Mlycd	Malonyl-CoA decarboxylase, mitochondrial	1	GYALNPVANFHLQNGAVMWR	GYALNPVANFHLQNGAVMWR	3	GYALNPVANFHLQNGAVMWR3	24649.5	12400.5	16809.1
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	GYALVPIVVSPSAPK	GYALVPIVVSPSAPK	2	GYALVPIVVSPSAPK2	25943.1	34150	24624.9
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	GYASGVER	GYASGVER	2	GYASGVER2	101404	105741	111664
Q5XI81	Q5XI81	FXR1_RAT	Fxr1	RNA-binding protein FXR1	1	GYATDESTVSSVQGSR	GYATDESTVSSVQGSR	2	GYATDESTVSSVQGSR2		2662.01	
Q5PPL3	Q5PPL3	NSDHL_RAT	Nsdhl	Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating	1	GYAVNVFDVR	GYAVNVFDVR	2	GYAVNVFDVR2	41887.7	32848	38962.7
Q9ESC2	Q9ESC2	TNMD_RAT	Tnmd	Tenomodulin	1	GYCCIYCR	GYC(UniMod:4)C(UniMod:4)IYC(UniMod:4)R	2	GYC(UniMod:4)C(UniMod:4)IYC(UniMod:4)R2	17020.3	16340.6	15328.1
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	GYCDVFMR	GYC(UniMod:4)DVFMR	2	GYC(UniMod:4)DVFMR2	144234	112591	116933
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	GYCTPLVR	GYC(UniMod:4)TPLVR	2	GYC(UniMod:4)TPLVR2	14305.8	14829.5	13099.3
Q499N5	Q499N5	ACSF2_RAT	Acsf2	Medium-chain acyl-CoA ligase ACSF2, mitochondrial	1	GYCVMQGYWGEPQK	GYC(UniMod:4)VMQGYWGEPQK	2	GYC(UniMod:4)VMQGYWGEPQK2	21074.8	4717.02	5993.06
A0A0G2QC40	A0A0G2QC40	A0A0G2QC40_RAT	Mkrn1	RING-type E3 ubiquitin transferase	1	GYCVYGDR	GYC(UniMod:4)VYGDR	2	GYC(UniMod:4)VYGDR2	25834.2	41963.3	40027.5
P62997	P62997;A0A8I6AB81	TRA2B_RAT	Tra2b	Transformer-2 protein homolog beta	0	GYDDRDYYSR	GYDDRDYYSR	3	GYDDRDYYSR3	24962.9	22402.2	19092.5
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	GYDLDAAWPTFAR	GYDLDAAWPTFAR	2	GYDLDAAWPTFAR2	155386	187224	169135
A0A0U1RS29	A0A0U1RS29	A0A0U1RS29_RAT	Rgl2	Ral guanine nucleotide dissociation stimulator-like 2	1	GYDLRPNPDIQQWLQGLQPLTEAQSHR	GYDLRPNPDIQQWLQGLQPLTEAQSHR	4	GYDLRPNPDIQQWLQGLQPLTEAQSHR4	13968.7	9389.74	14164.2
E9PTT0	E9PTT0	ZDH17_RAT	Zdhhc17	Palmitoyltransferase ZDHHC17	1	GYDNPSFLR	GYDNPSFLR	2	GYDNPSFLR2	15455.4	9805.22	8011.98
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	GYDPSGLFR	GYDPSGLFR	2	GYDPSGLFR2	13828.5	14706.2	20043.6
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	GYDPSVNAGIFNAFATAAFR	GYDPSVNAGIFNAFATAAFR	3	GYDPSVNAGIFNAFATAAFR3	9759.19	10639.2	10923.7
Q5RKI1	Q5RKI1;Q6P3V8	IF4A2_RAT	Eif4a2	Eukaryotic initiation factor 4A-II	0	GYDVIAQAQSGTGK	GYDVIAQAQSGTGK	2	GYDVIAQAQSGTGK2	146129	108899	106625
Q5RKI1	Q5RKI1;Q6P3V8	IF4A2_RAT	Eif4a2	Eukaryotic initiation factor 4A-II	0	GYDVIAQAQSGTGK	GYDVIAQAQSGTGK	3	GYDVIAQAQSGTGK3	4119.77		6286.8
Q498S0	Q498S0	Q498S0_RAT	Chst12	Carbohydrate sulfotransferase	1	GYDWSTHDAQQNPDRDR	GYDWSTHDAQQNPDRDR	3	GYDWSTHDAQQNPDRDR3	5719.18	7241.16	7108.51
Q498S0	Q498S0	Q498S0_RAT	Chst12	Carbohydrate sulfotransferase	1	GYDWSTHDAQQNPDRDR	GYDWSTHDAQQNPDRDR	4	GYDWSTHDAQQNPDRDR4	11732.5	9287.45	8285.37
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	GYDYGPHFQGVYEATLEGEQGK	GYDYGPHFQGVYEATLEGEQGK	3	GYDYGPHFQGVYEATLEGEQGK3	6266.76	6328.11	5998.98
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	GYEASVDR	GYEASVDR	2	GYEASVDR2	33543.2	36993.4	38012.9
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	GYECILNIQGMEQR	GYEC(UniMod:4)ILNIQGMEQR	2	GYEC(UniMod:4)ILNIQGMEQR2	25066.3	25686.3	23289.7
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	GYECILNIQGMEQR	GYEC(UniMod:4)ILNIQGMEQR	3	GYEC(UniMod:4)ILNIQGMEQR3	5891.61	10619.2	10265
Q68G38	Q68G38	TOR1A_RAT	Tor1a	Torsin-1A	1	GYEEDEDIINK	GYEEDEDIINK	2	GYEEDEDIINK2	9169.05	8625.17	16236
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	GYEEPDRYIVVGAQR	GYEEPDRYIVVGAQR	3	GYEEPDRYIVVGAQR3	20441.2	23833.8	23075.4
M0R8J3	M0R8J3	M0R8J3_RAT	Jmy	Junction mediating and regulatory protein, p53 cofactor	1	GYEEVLQR	GYEEVLQR	2	GYEEVLQR2	4143.28	5615.66	7077.4
Q9Z1P2	Q9QXQ0;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	GYEEWLLNEIR	GYEEWLLNEIR	2	GYEEWLLNEIR2	2.67441e+06	2.97818e+06	2.79191e+06
Q9Z1P2	Q9QXQ0;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	GYEEWLLNEIR	GYEEWLLNEIR	3	GYEEWLLNEIR3	364703	386159	368883
Q9Z1P2	Q9QXQ0;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	GYEEWLLNEIRR	GYEEWLLNEIRR	2	GYEEWLLNEIRR2		6462.99	
Q9Z1P2	Q9QXQ0;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	GYEEWLLNEIRR	GYEEWLLNEIRR	3	GYEEWLLNEIRR3	110544	125520	132817
P0CH38	P0CH38	FBSP1_RAT	Fbxo45	F-box/SPRY domain-containing protein 1 (Fragment)	1	GYEFLGVAFR	GYEFLGVAFR	2	GYEFLGVAFR2	4407.72	4981.34	5121.14
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	GYEGENLR	GYEGENLR	2	GYEGENLR2	8421.36	13061.8	
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	GYEGQYCER	GYEGQYC(UniMod:4)ER	2	GYEGQYC(UniMod:4)ER2	32783	38984.8	36710.7
B5DFF2	A0A8I5ZR01;B5DFF2	B5DFF2_RAT	Rbpms2	RNA binding protein, mRNA processing factor 2	0	GYEGSLIK	GYEGSLIK	2	GYEGSLIK2	117764	98031.8	101685
O88281	O88281	MEGF6_RAT	Megf6	Multiple epidermal growth factor-like domains protein 6	1	GYELDEDQK	GYELDEDQK	2	GYELDEDQK2	7998.86	7650.69	9636.3
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	GYELLFQPEVVR	GYELLFQPEVVR	2	GYELLFQPEVVR2	56853.6	54042.6	61096.6
Q8R492	Q8R492	Q8R492_RAT	Fap	Fibroblast activation protein, alpha	1	GYELPRPIQYLCWSPVGSK	GYELPRPIQYLC(UniMod:4)WSPVGSK	3	GYELPRPIQYLC(UniMod:4)WSPVGSK3	10357.7	19580.7	15587.6
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	GYENEDNYSNIK	GYENEDNYSNIK	2	GYENEDNYSNIK2	46391.7	52078	45032.4
A0A0G2JXT6	A0A0G2JXT6	MTMR6_RAT	Mtmr6	Myotubularin-related protein 6	1	GYENEDNYSNIR	GYENEDNYSNIR	2	GYENEDNYSNIR2	2028	1434.21	6593.56
P15978	A0A0G2K1E1;P15978	HA11_RAT	RT1-Aw2	Class I histocompatibility antigen, Non-RT1.A alpha-1 chain	0	GYEQHAYDGR	GYEQHAYDGR	2	GYEQHAYDGR2	14296.1	12323.9	
P15978	A0A0G2K1E1;P15978	HA11_RAT	RT1-Aw2	Class I histocompatibility antigen, Non-RT1.A alpha-1 chain	0	GYEQHAYDGR	GYEQHAYDGR	3	GYEQHAYDGR3	127038	99270.1	
P15978	A0A0G2K1E1;P15978	HA11_RAT	RT1-Aw2	Class I histocompatibility antigen, Non-RT1.A alpha-1 chain	0	GYEQHAYDGRDYIALNEDLK	GYEQHAYDGRDYIALNEDLK	3	GYEQHAYDGRDYIALNEDLK3	17439	9337.02	20581.1
P15978	A0A0G2K1E1;P15978	HA11_RAT	RT1-Aw2	Class I histocompatibility antigen, Non-RT1.A alpha-1 chain	0	GYEQHAYDGRDYIALNEDLK	GYEQHAYDGRDYIALNEDLK	4	GYEQHAYDGRDYIALNEDLK4	125057	107975	119485
A0A0G2JZH0	A0A0G2JZH0	A0A0G2JZH0_RAT	Cab39	Calcium binding protein 39	1	GYESPEIALNCGIMLR	GYESPEIALNC(UniMod:4)GIMLR	2	GYESPEIALNC(UniMod:4)GIMLR2	5389.35	4142.4	3118.11
A0A8I5ZZG2	A0A8I5ZZG2	A0A8I5ZZG2_RAT	Reep3	Receptor expression-enhancing protein	1	GYETMVNFGR	GYETMVNFGR	2	GYETMVNFGR2	20153.7	20422.3	12955.7
Q3MHS7	Q3MHS7	Q3MHS7_RAT	Gmds	GDP-mannose 4,6-dehydratase	1	GYEVHGIVR	GYEVHGIVR	2	GYEVHGIVR2	2498.12	1772.42	6306.1
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	GYFAVTEK	GYFAVTEK	1	GYFAVTEK1	11815.4	10238.7	12441.4
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	GYFAVTEK	GYFAVTEK	2	GYFAVTEK2	652860	773784	696739
P30427	P30427	PLEC_RAT	Plec	Plectin	1	GYFDEEMNR	GYFDEEMNR	2	GYFDEEMNR2	4607.54	2690.18	
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	GYFIQPTVFGDVK	GYFIQPTVFGDVK	2	GYFIQPTVFGDVK2	482330	546538	519934
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	GYFIQPTVFGDVK	GYFIQPTVFGDVK	3	GYFIQPTVFGDVK3	8157.69	6981.04	11229.5
D4A533	D4A533	D4A533_RAT	Tapt1	Transmembrane anterior posterior transformation 1	1	GYFLEHNEAK	GYFLEHNEAK	2	GYFLEHNEAK2	1741.42	1825.04	
D4A533	D4A533	D4A533_RAT	Tapt1	Transmembrane anterior posterior transformation 1	1	GYFLEHNEAK	GYFLEHNEAK	3	GYFLEHNEAK3	23722.2	17807.6	28583.2
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	GYFLGNDGK	GYFLGNDGK	1	GYFLGNDGK1	296549	301974	295598
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	GYFLGNDGK	GYFLGNDGK	2	GYFLGNDGK2	73067.1	418651	483709
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	GYFLGNDGKSCLSTAPFPCGK	GYFLGNDGKSC(UniMod:4)LSTAPFPC(UniMod:4)GK	3	GYFLGNDGKSC(UniMod:4)LSTAPFPC(UniMod:4)GK3	22553.7	41625.3	27247.7
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	GYFPEPVTVK	GYFPEPVTVK	2	GYFPEPVTVK2	3.58574e+07	4.29849e+07	4.12667e+07
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	GYFSAVPK	GYFSAVPK	1	GYFSAVPK1	5208.36	5081.92	
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	GYFSAVPK	GYFSAVPK	2	GYFSAVPK2	142660	129666	141749
Q8CHM7	Q8CHM7	HACL1_RAT	Hacl1	2-hydroxyacyl-CoA lyase 1	1	GYFVQTPEELQDSLR	GYFVQTPEELQDSLR	2	GYFVQTPEELQDSLR2	11067.1	7672.34	6687.91
Q9Z2L0	Q9Z2L0;A0A8I5ZWU7;A0A8I6GHL9	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	0	GYGFGLIK	GYGFGLIK	1	GYGFGLIK1	4297.83	10867.7	7390.37
Q9Z2L0	Q9Z2L0;A0A8I5ZWU7;A0A8I6GHL9	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	0	GYGFGLIK	GYGFGLIK	2	GYGFGLIK2	1.28533e+06	1.34593e+06	1.46153e+06
Q9R1Z0	Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	1	GYGFGMVK	GYGFGMVK	1	GYGFGMVK1	16725.6	16175.2	15222.8
Q9R1Z0	Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	1	GYGFGMVK	GYGFGMVK	2	GYGFGMVK2	1.63056e+06	1.75243e+06	1.84536e+06
Q9EPH8	Q9EPH8	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	1	GYGFVHFETQEAAER	GYGFVHFETQEAAER	3	GYGFVHFETQEAAER3	44146.5	30720.2	40130
D3ZGE9	M0R7T6;D3ZGE9	D3ZGE9_RAT	Rbm38	RNA binding motif protein 38	0	GYGFVTMADR	GYGFVTMADR	2	GYGFVTMADR2	39610.8	39994.5	45998
A0A8I5Y224	A0A8I5Y224	A0A8I5Y224_RAT	Adam9	ADAM metallopeptidase domain 9	1	GYGGSVDSGPTYNAK	GYGGSVDSGPTYNAK	2	GYGGSVDSGPTYNAK2	4825.09	8304.69	10632.1
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	GYGLVEGDDRR	GYGLVEGDDRR	3	GYGLVEGDDRR3	60758.7	62480	55804.4
D3ZN95	Q5RKG2;D3ZN95	HCFC1_RAT	Hcfc1	Host cell factor 1	0	GYGPATQVR	GYGPATQVR	2	GYGPATQVR2	5870.49	6771.52	4382.32
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	GYGPDGHFGMFPANYVELIE	GYGPDGHFGMFPANYVELIE	3	GYGPDGHFGMFPANYVELIE3	7236.63	12061.4	13365
A0A0G2K8J8	A0A0G2K8J8	A0A0G2K8J8_RAT	Fam120b	Family with sequence similarity 120B	1	GYGVETLLEQNR	GYGVETLLEQNR	2	GYGVETLLEQNR2	3517.29	5666.21	5230.95
Q9Z1K9	Q9Z1K9	ADA17_RAT	Adam17	Disintegrin and metalloproteinase domain-containing protein 17	1	GYGVQIEQIR	GYGVQIEQIR	2	GYGVQIEQIR2	12921.9	9238.56	12163.9
P47875	P47875	CSRP1_RAT	Csrp1	Cysteine and glycine-rich protein 1	1	GYGYGQGAGTLSMDK	GYGYGQGAGTLSMDK	2	GYGYGQGAGTLSMDK2	224740	204065	233485
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	GYHANEEGSECVDVNECETGVHR	GYHANEEGSEC(UniMod:4)VDVNEC(UniMod:4)ETGVHR	3	GYHANEEGSEC(UniMod:4)VDVNEC(UniMod:4)ETGVHR3	4320.67	6711.27	6795.66
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	GYHANEEGSECVDVNECETGVHR	GYHANEEGSEC(UniMod:4)VDVNEC(UniMod:4)ETGVHR	4	GYHANEEGSEC(UniMod:4)VDVNEC(UniMod:4)ETGVHR4	53149.3	76764.1	51905.9
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	GYHANFCLGPCPYIWSLDTQYSK	GYHANFC(UniMod:4)LGPC(UniMod:4)PYIWSLDTQYSK	3	GYHANFC(UniMod:4)LGPC(UniMod:4)PYIWSLDTQYSK3	36319.6	28550.9	36064.4
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	GYHEALAEWLGAAAR	GYHEALAEWLGAAAR	3	GYHEALAEWLGAAAR3	17265.6	16745.6	23046.6
Q3MIE4	Q3MIE4	VAT1_RAT	Vat1	Synaptic vesicle membrane protein VAT-1 homolog	1	GYHLLKPMGK	GYHLLKPMGK	2	GYHLLKPMGK2	4946.47	7080.13	2258.03
Q3MIE4	Q3MIE4	VAT1_RAT	Vat1	Synaptic vesicle membrane protein VAT-1 homolog	1	GYHLLKPMGK	GYHLLKPMGK	3	GYHLLKPMGK3	80184.6	72271	60472.5
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	GYHLNEEGTR	GYHLNEEGTR	2	GYHLNEEGTR2	444585	260670	221139
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	GYHLNEEGTR	GYHLNEEGTR	3	GYHLNEEGTR3	1.72232e+06	1.4143e+06	1.31225e+06
Q63515	Q63515	C4BPB_RAT	C4bpb	C4b-binding protein beta chain	1	GYHLVGK	GYHLVGK	1	GYHLVGK1	235865	284241	218711
Q63515	Q63515	C4BPB_RAT	C4bpb	C4b-binding protein beta chain	1	GYHLVGK	GYHLVGK	2	GYHLVGK2	1.97375e+06	2.1879e+06	2.01648e+06
Q63515	Q63515	C4BPB_RAT	C4bpb	C4b-binding protein beta chain	1	GYHLVGKK	GYHLVGKK	1	GYHLVGKK1	3501.92	7218.78	6870.02
Q63515	Q63515	C4BPB_RAT	C4bpb	C4b-binding protein beta chain	1	GYHLVGKK	GYHLVGKK	2	GYHLVGKK2	44738.9	98754.6	112618
A0A8I6AKB0	A0A8I6AKB0	A0A8I6AKB0_RAT	Asmtl	Acetylserotonin O-methyltransferase-like	1	GYHVVLASASPR	GYHVVLASASPR	2	GYHVVLASASPR2	4581.05	1580.95	4440.07
A0A8I6AKB0	A0A8I6AKB0	A0A8I6AKB0_RAT	Asmtl	Acetylserotonin O-methyltransferase-like	1	GYHVVLASASPR	GYHVVLASASPR	3	GYHVVLASASPR3	16059	9701.73	13960.7
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	GYIDLSK	GYIDLSK	1	GYIDLSK1	6870.57	4646.35	3298.61
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	GYIDLSK	GYIDLSK	2	GYIDLSK2	270332	261031	256201
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	GYIEVMR	GYIEVMR	2	GYIEVMR2	82477.4	111250	111259
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	GYIFLEYASPAHAVDAVK	GYIFLEYASPAHAVDAVK	2	GYIFLEYASPAHAVDAVK2	19628.3	31479.3	19202
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	GYIFLEYASPAHAVDAVK	GYIFLEYASPAHAVDAVK	3	GYIFLEYASPAHAVDAVK3	188040	201660	179517
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	GYIFLTLR	GYIFLTLR	2	GYIFLTLR2	8867.26	5391.95	3637.66
Q8VHK0	Q8VHK0	ACOT8_RAT	Acot8	Acyl-coenzyme A thioesterase 8	1	GYIGEGDIK	GYIGEGDIK	2	GYIGEGDIK2	24511.8	19667.5	24246.1
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	GYIGTHCGQPVCESGCLNGGR	GYIGTHC(UniMod:4)GQPVC(UniMod:4)ESGC(UniMod:4)LNGGR	3	GYIGTHC(UniMod:4)GQPVC(UniMod:4)ESGC(UniMod:4)LNGGR3	23415.3	28360.1	23673.6
P39052	P39052;P21575	DYN2_RAT	Dnm2	Dynamin-2	0	GYIGVVNR	GYIGVVNR	2	GYIGVVNR2	254435	243839	219207
P48508	P48508	GSH0_RAT	Gclm	Glutamate--cysteine ligase regulatory subunit	1	GYILQAK	GYILQAK	2	GYILQAK2	25159.6	26922.5	18247.4
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	GYILQEDGR	GYILQEDGR	2	GYILQEDGR2	77257.9	76637.9	80040
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	GYIQMTHLNK	GYIQMTHLNK	2	GYIQMTHLNK2	2083.51	2646.77	
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	GYIQMTHLNK	GYIQMTHLNK	3	GYIQMTHLNK3	10290.2	5773.13	7367.21
P63039	A0A8I5ZVK6;A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	GYISPYFINTSK	GYISPYFINTSK	2	GYISPYFINTSK2	799368	823736	885358
D4A830	D4A830	D4A830_RAT	Ppa2	inorganic diphosphatase	1	GYIWNYGALPQTWEDPHLK	GYIWNYGALPQTWEDPHLK	3	GYIWNYGALPQTWEDPHLK3	14211.6	7080.35	8210.32
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	GYIYVVK	GYIYVVK	2	GYIYVVK2	18952.9	14669.2	17617.9
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	GYKLGEDHR	GYKLGEDHR	2	GYKLGEDHR2	3542.32	4469.77	4538.6
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	GYKLGEDHRSCSPSDK	GYKLGEDHRSC(UniMod:4)SPSDK	3	GYKLGEDHRSC(UniMod:4)SPSDK3	1538.95		1672.04
F7EUU4	F7EUU4	F7EUU4_RAT	Cops5	COP9 signalosome subunit 5	1	GYKPPDEGPSEYQTIPLNK	GYKPPDEGPSEYQTIPLNK	3	GYKPPDEGPSEYQTIPLNK3	119832	133046	126880
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	GYKTPVLSAETFTGK	GYKTPVLSAETFTGK	3	GYKTPVLSAETFTGK3	4217.84	5432.16	7342.76
Q4V8A2	Q4V8A2	CDC27_RAT	Cdc27	Cell division cycle protein 27 homolog	1	GYLALCSYNCK	GYLALC(UniMod:4)SYNC(UniMod:4)K	2	GYLALC(UniMod:4)SYNC(UniMod:4)K2	2208.78	3241.87	1207.7
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	GYLDNVQLGHILER	GYLDNVQLGHILER	3	GYLDNVQLGHILER3	71353.6	79249.7	90877.8
Q5M936	Q5M936	TOR3A_RAT	Tor3a	Torsin-3A	1	GYLEMPQVGK	GYLEMPQVGK	2	GYLEMPQVGK2	73283.3	84943.5	72769.6
Q9Z2Z8	Q9Z2Z8	DHCR7_RAT	Dhcr7	7-dehydrocholesterol reductase	1	GYLFPTSAEDCK	GYLFPTSAEDC(UniMod:4)K	2	GYLFPTSAEDC(UniMod:4)K2	9116.77	10460.5	7714.31
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GYLFWTEWGHYPR	GYLFWTEWGHYPR	2	GYLFWTEWGHYPR2	13519.4	17965.1	
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	GYLFWTEWGHYPR	GYLFWTEWGHYPR	3	GYLFWTEWGHYPR3	94987.1	127709	108438
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	GYLGPEQLPDCLK	GYLGPEQLPDC(UniMod:4)LK	2	GYLGPEQLPDC(UniMod:4)LK2	991027	875775	1.00467e+06
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	GYLGPEQLPDCLK	GYLGPEQLPDC(UniMod:4)LK	3	GYLGPEQLPDC(UniMod:4)LK3	23406.1	12567.1	5063.83
Q5XIN4	Q5XIN4	Q5XIN4_RAT	Mtmr9	Myotubularin related protein 9	1	GYLIDTR	GYLIDTR	2	GYLIDTR2	13630.8	9262.4	10052.6
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	GYLISGSSYAR	GYLISGSSYAR	2	GYLISGSSYAR2	422266	487312	417560
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	GYLKDPAR	GYLKDPAR	2	GYLKDPAR2	6378.74	4955.75	3218.17
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	GYLKDPEK	GYLKDPEK	2	GYLKDPEK2	29940.2	45271.8	25699.7
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	GYLLPMR	GYLLPMR	2	GYLLPMR2	990935	973598	1.159e+06
Q5XIM0	Q5XIM0	Q5XIM0_RAT	Bcs1l	Mitochondrial chaperone BCS1	1	GYLLYGPPGCGK	GYLLYGPPGC(UniMod:4)GK	2	GYLLYGPPGC(UniMod:4)GK2	30436.1	20028.7	25788.2
Q7TT49	Q7TT49;O54874	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	0	GYLQALASK	GYLQALASK	1	GYLQALASK1		3899.95	
Q7TT49	Q7TT49;O54874	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	0	GYLQALASK	GYLQALASK	2	GYLQALASK2	120936	140295	137551
Q5M887	Q5M887	TPC13_RAT	Trappc13	Trafficking protein particle complex subunit 13	1	GYLQPMDTR	GYLQPMDTR	2	GYLQPMDTR2	64657.8	68793.1	83824.4
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	GYLSLSK	GYLSLSK	1	GYLSLSK1	15011.5	7062.78	3582.72
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	GYLSLSK	GYLSLSK	2	GYLSLSK2	36470.6	27220.9	38872
P14056	A0A8I6ATH0;P14056	ARAF_RAT	Araf	Serine/threonine-protein kinase A-Raf	0	GYLSPDLSK	GYLSPDLSK	2	GYLSPDLSK2	57260.8	57325.4	41747.9
Q32KK2	Q32KK2	Q32KK2_RAT	Arsa	Arylsulfatase A	1	GYLTGMAGK	GYLTGMAGK	2	GYLTGMAGK2	13665.3		10431
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	GYLVIVSR	GYLVIVSR	2	GYLVIVSR2	5256.22	7167.1	7159.85
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	GYLVPSGDLSAR	GYLVPSGDLSAR	2	GYLVPSGDLSAR2	586097	646755	602554
Q920J4	Q920J4	TXNL1_RAT	Txnl1	Thioredoxin-like protein 1	1	GYMDLMPFINK	GYMDLMPFINK	2	GYMDLMPFINK2	153357	194216	201893
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	GYMVSCLVDHR	GYMVSC(UniMod:4)LVDHR	2	GYMVSC(UniMod:4)LVDHR2	1800.9	1538.92	
Q6AYA6	Q6AYA6	CYBC1_RAT	Cybc1	Cytochrome b-245 chaperone 1	1	GYMVVLR	GYMVVLR	2	GYMVVLR2	90932.8	94745.2	99731.9
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	GYNAQEYYDRIPELR	GYNAQEYYDRIPELR	3	GYNAQEYYDRIPELR3	19223.4	26756.2	42802.3
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	GYNDKQPILLK	GYNDKQPILLK	3	GYNDKQPILLK3	3279.72	6403.28	3468.14
F1LTR1	F1LTR1	WDR26_RAT	Wdr26	WD repeat-containing protein 26	1	GYNFEDLTDR	GYNFEDLTDR	2	GYNFEDLTDR2	31081.4	29134.8	20771.3
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	GYNFGSELTQNTVYVGGK	GYNFGSELTQNTVYVGGK	2	GYNFGSELTQNTVYVGGK2	45964.4	46624.7	42434.2
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	GYNFGSELTQNTVYVGGK	GYNFGSELTQNTVYVGGK	3	GYNFGSELTQNTVYVGGK3	6062.54	11756	8199.75
Q64350	Q64350	EI2BE_RAT	Eif2b5	Translation initiation factor eIF-2B subunit epsilon	1	GYNPAEVGPEGQGYLWK	GYNPAEVGPEGQGYLWK	2	GYNPAEVGPEGQGYLWK2	34256.8	27154.8	35375.3
Q63369	Q63369	NFKB1_RAT	Nfkb1	Nuclear factor NF-kappa-B p105 subunit	1	GYNPGLLVHSDLAYLQAEGGGDR	GYNPGLLVHSDLAYLQAEGGGDR	3	GYNPGLLVHSDLAYLQAEGGGDR3	4736.8	5314.47	1830.46
A0A8I5ZLU0	A0A0G2K980;A0A8I6ACY1;A0A8I5ZLU0	A0A8I5ZLU0_RAT	ENSRNOG00000066926	Ig-like domain-containing protein	0	GYNPSLK	GYNPSLK	1	GYNPSLK1	2166.63	3040.28	
A0A8I5ZLU0	A0A0G2K980;A0A8I6ACY1;A0A8I5ZLU0	A0A8I5ZLU0_RAT	ENSRNOG00000066926	Ig-like domain-containing protein	0	GYNPSLK	GYNPSLK	2	GYNPSLK2	370598	381006	346779
P08460	P08460	NID1_RAT	Nid1	Nidogen-1 (Fragment)	1	GYPDPHNVPR	GYPDPHNVPR	3	GYPDPHNVPR3	33419.6	25609.3	27306.3
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	GYPEVALHFVK	GYPEVALHFVK	3	GYPEVALHFVK3	46762.8	50351.3	32619.8
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	GYPEVALHFVKDEK	GYPEVALHFVKDEK	3	GYPEVALHFVKDEK3	24269.1	17875.1	24374.3
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	GYPEVALHFVKDEK	GYPEVALHFVKDEK	4	GYPEVALHFVKDEK4	4391.18	8408.33	6701.7
Q5XFW6	Q5XFW6	WDR6_RAT	Wdr6	WD repeat-containing protein 6	1	GYPGLGVSSLSFK	GYPGLGVSSLSFK	2	GYPGLGVSSLSFK2	29702	31357.2	17760.3
P43244	P43244	MATR3_RAT	Matr3	Matrin-3	1	GYPHLCSICDLPVHSNK	GYPHLC(UniMod:4)SIC(UniMod:4)DLPVHSNK	3	GYPHLC(UniMod:4)SIC(UniMod:4)DLPVHSNK3	9290.89		
P43244	P43244	MATR3_RAT	Matr3	Matrin-3	1	GYPHLCSICDLPVHSNK	GYPHLC(UniMod:4)SIC(UniMod:4)DLPVHSNK	4	GYPHLC(UniMod:4)SIC(UniMod:4)DLPVHSNK4	29051.5	3345.25	
Q8K4C0	Q8K4C0	FMO5_RAT	Fmo5	Flavin-containing monooxygenase 5	1	GYPIDILLSSR	GYPIDILLSSR	2	GYPIDILLSSR2	6546.45	10121.5	10375.5
B1WC26	B1WC26	B1WC26_RAT	Nans	N-acetylneuraminate synthase	1	GYPPEDIFNLVGK	GYPPEDIFNLVGK	2	GYPPEDIFNLVGK2	27643.1	29861.6	
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	GYPQPVIAWTK	GYPQPVIAWTK	2	GYPQPVIAWTK2	122941	114925	114826
Q5I0H9	Q5I0H9	PDIA5_RAT	Pdia5	Protein disulfide-isomerase A5	1	GYPTICYFEK	GYPTIC(UniMod:4)YFEK	2	GYPTIC(UniMod:4)YFEK2	32709.1	24077.2	23685.9
D3ZZC1	D3ZZC1	D3ZZC1_RAT	Txndc5	protein disulfide-isomerase	1	GYPTLLLFR	GYPTLLLFR	2	GYPTLLLFR2	64349.1	53854.8	66421.4
D3ZZC1	D3ZZC1	D3ZZC1_RAT	Txndc5	protein disulfide-isomerase	1	GYPTLLWFR	GYPTLLWFR	2	GYPTLLWFR2	36505.2	29462.5	19017.7
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	GYPTYCHLK	GYPTYC(UniMod:4)HLK	2	GYPTYC(UniMod:4)HLK2	347514	253766	267414
Q6V0K7	Q6V0K7	OIT3_RAT	Oit3	Oncoprotein-induced transcript 3 protein	1	GYQCECPR	GYQC(UniMod:4)EC(UniMod:4)PR	2	GYQC(UniMod:4)EC(UniMod:4)PR2	58067.2	64309	64813.4
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	GYQEGVK	GYQEGVK	2	GYQEGVK2	110538	131743	136702
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	GYQEGVKK	GYQEGVKK	2	GYQEGVKK2			49502.2
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	GYQINWWK	GYQINWWK	2	GYQINWWK2	16158.1	21982.5	22846.8
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	GYQLLAMLLK	GYQLLAMLLK	2	GYQLLAMLLK2	3556.18	994.704	2738.39
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	GYQLSDVDGVTCEDIDECALPTGGHICSYR	GYQLSDVDGVTC(UniMod:4)EDIDEC(UniMod:4)ALPTGGHIC(UniMod:4)SYR	4	GYQLSDVDGVTC(UniMod:4)EDIDEC(UniMod:4)ALPTGGHIC(UniMod:4)SYR4	29939.5	22950	18746
P98166	P98166	VLDLR_RAT	Vldlr	Very low-density lipoprotein receptor	1	GYQMDLATGVCK	GYQMDLATGVC(UniMod:4)K	2	GYQMDLATGVC(UniMod:4)K2	12119.2	5681.89	18673
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	GYQPCDPQVIQDR	GYQPC(UniMod:4)DPQVIQDR	2	GYQPC(UniMod:4)DPQVIQDR2	109283	96456.6	100290
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	GYQPCDPQVIQDR	GYQPC(UniMod:4)DPQVIQDR	3	GYQPC(UniMod:4)DPQVIQDR3	10167.2	13602.4	11910.2
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	GYQPPLCEECPGCPLPCSTYVFCAECLK	GYQPPLC(UniMod:4)EEC(UniMod:4)PGC(UniMod:4)PLPC(UniMod:4)STYVFC(UniMod:4)AEC(UniMod:4)LK	4	GYQPPLC(UniMod:4)EEC(UniMod:4)PGC(UniMod:4)PLPC(UniMod:4)STYVFC(UniMod:4)AEC(UniMod:4)LK4	2840.77	3691.12	3525.12
Q2KJ09	Q2KJ09	UBP16_RAT	Usp16	Ubiquitin carboxyl-terminal hydrolase 16	1	GYQQQDSQELLR	GYQQQDSQELLR	2	GYQQQDSQELLR2	4423.87	4819.11	2757.75
Q4V7F2	Q4V7F2	CREL1_RAT	Creld1	Protein disulfide isomerase Creld1	1	GYQQVGSK	GYQQVGSK	2	GYQQVGSK2			17330.1
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	GYQTSPDLR	GYQTSPDLR	2	GYQTSPDLR2	46234.7	46136.3	41821.4
P47824	P47824	P2RX1_RAT	P2rx1	P2X purinoceptor 1	1	GYQTSSDLISSVSVK	GYQTSSDLISSVSVK	2	GYQTSSDLISSVSVK2	13541.4	12041.8	20272.5
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	GYQVPPFGWR	GYQVPPFGWR	2	GYQVPPFGWR2	44463	36171.7	40965.7
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	GYQVTYVR	GYQVTYVR	2	GYQVTYVR2	15160	15412.2	25367.2
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	GYRPENSTAVTGGPR	GYRPENSTAVTGGPR	3	GYRPENSTAVTGGPR3	37667	39079.4	35203.6
P16391	P16391	HA12_RAT		RT1 class I histocompatibility antigen, AA alpha chain	1	GYRQDAYDGR	GYRQDAYDGR	2	GYRQDAYDGR2	3039.03	1928.34	
P16391	P16391	HA12_RAT		RT1 class I histocompatibility antigen, AA alpha chain	1	GYRQDAYDGR	GYRQDAYDGR	3	GYRQDAYDGR3	20409.4	28682.8	27215.2
P16391	P16391	HA12_RAT		RT1 class I histocompatibility antigen, AA alpha chain	1	GYRQDAYDGRDYIALNEDLK	GYRQDAYDGRDYIALNEDLK	4	GYRQDAYDGRDYIALNEDLK4	10984.9	13003	16181.4
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	GYSDEAALILHR	GYSDEAALILHR	2	GYSDEAALILHR2	4266.03	3752.79	6558.23
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	GYSDEAALILHR	GYSDEAALILHR	3	GYSDEAALILHR3	30922.1	25595.7	33420.9
D3ZRI9	D3ZRI9	D3ZRI9_RAT	Gan	Gigaxonin	1	GYSECIVTIGGEER	GYSEC(UniMod:4)IVTIGGEER	2	GYSEC(UniMod:4)IVTIGGEER2	15708.8	9040.24	13351.3
P17220	P17220	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	1	GYSFSLTTFSPSGK	GYSFSLTTFSPSGK	2	GYSFSLTTFSPSGK2	1.74744e+06	1.86435e+06	1.87853e+06
P17220	P17220	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	1	GYSFSLTTFSPSGK	GYSFSLTTFSPSGK	3	GYSFSLTTFSPSGK3	7720.52	8805.9	9448.55
P60711	P60711;P63259;A0A8I5Y704	ACTB_RAT	Actb	Actin, cytoplasmic 1	0	GYSFTTTAER	GYSFTTTAER	2	GYSFTTTAER2	402573	695509	998772
P60711	P60711;P63259;A0A8I5Y704	ACTB_RAT	Actb	Actin, cytoplasmic 1	0	GYSFTTTAEREIVR	GYSFTTTAEREIVR	3	GYSFTTTAEREIVR3	197574	224656	270652
P68136	P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	GYSFVTTAER	GYSFVTTAER	2	GYSFVTTAER2	73507.9	75466	63515.9
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	GYSGGTNNNYPMR	GYSGGTNNNYPMR	2	GYSGGTNNNYPMR2	12148.6	7801.56	3824.2
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	GYSHCIDVYIK	GYSHC(UniMod:4)IDVYIK	3	GYSHC(UniMod:4)IDVYIK3	7964.77	15391	
D3ZHQ1	D3ZHQ1	D3ZHQ1_RAT	Dpp8	Dipeptidylpeptidase 8	1	GYSHSCCLSR	GYSHSC(UniMod:4)C(UniMod:4)LSR	2	GYSHSC(UniMod:4)C(UniMod:4)LSR2		2431.2	
D3ZHQ1	D3ZHQ1	D3ZHQ1_RAT	Dpp8	Dipeptidylpeptidase 8	1	GYSHSCCLSR	GYSHSC(UniMod:4)C(UniMod:4)LSR	3	GYSHSC(UniMod:4)C(UniMod:4)LSR3	13087.8	16948.6	20232.5
Q8VHF5	Q8VHF5	CISY_RAT	Cs	Citrate synthase, mitochondrial	1	GYSIPECQK	GYSIPEC(UniMod:4)QK	2	GYSIPEC(UniMod:4)QK2	701887	776938	794959
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	GYSLASLLAK	GYSLASLLAK	2	GYSLASLLAK2	32817.5	41627.8	32977.1
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	GYSLVSGGTDTHLVLVDLRPK	GYSLVSGGTDTHLVLVDLRPK	3	GYSLVSGGTDTHLVLVDLRPK3	10162.8	7648.01	3333.83
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	GYSLVSGGTDTHLVLVDLRPK	GYSLVSGGTDTHLVLVDLRPK	4	GYSLVSGGTDTHLVLVDLRPK4	16743.7	10717	21745.3
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	GYSLYTGGSGALSPGGPQAQNSPR	GYSLYTGGSGALSPGGPQAQNSPR	3	GYSLYTGGSGALSPGGPQAQNSPR3	22928.4	22569.9	28733
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	GYSPTPDHR	GYSPTPDHR	2	GYSPTPDHR2	286497		304250
Q5PQK5	Q5PQK5	Q5PQK5_RAT	Rdx	Radixin	1	GYSTWLK	GYSTWLK	2	GYSTWLK2	16821.9	14153.9	20717.5
Q62740	Q62740	SPP24_RAT	Spp2	Secreted phosphoprotein 24	1	GYSVPTAACR	GYSVPTAAC(UniMod:4)R	2	GYSVPTAAC(UniMod:4)R2	6.26909e+06	7.32008e+06	6.98628e+06
P28075	P28075	PSB5_RAT	Psmb5	Proteasome subunit beta type-5	1	GYSYDLQVEEAYDLAR	GYSYDLQVEEAYDLAR	2	GYSYDLQVEEAYDLAR2	53231.7	43636.3	55489.3
P28075	P28075	PSB5_RAT	Psmb5	Proteasome subunit beta type-5	1	GYSYDLQVEEAYDLAR	GYSYDLQVEEAYDLAR	3	GYSYDLQVEEAYDLAR3	38824.7	16628.5	23701.6
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	GYTEVLK	GYTEVLK	1	GYTEVLK1	2469	5594.34	6706.4
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	GYTEVLK	GYTEVLK	2	GYTEVLK2	158924	182857	199916
A0A0G2JZA7	A0A0G2JZA7	A0A0G2JZA7_RAT	Cemip2	hyaluronoglucosaminidase	1	GYTIHWSGPAPR	GYTIHWSGPAPR	3	GYTIHWSGPAPR3	6330.89	5600.99	3586.28
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	GYTISDSAPSR	GYTISDSAPSR	2	GYTISDSAPSR2	10825	7384.56	12623.8
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	GYTLADEEEDPLIYQHR	GYTLADEEEDPLIYQHR	3	GYTLADEEEDPLIYQHR3	16987.2	16933.2	9227.24
Q27W01	Q27W01	RBM8A_RAT	Rbm8a	RNA-binding protein 8A	1	GYTLVEYETYK	GYTLVEYETYK	2	GYTLVEYETYK2	6844.59	5144.81	7364.52
Q6P799	Q6P799	SYSC_RAT	Sars1	Serine--tRNA ligase, cytoplasmic	1	GYTPIYTPFFMR	GYTPIYTPFFMR	2	GYTPIYTPFFMR2	9933.3	9860.47	9671.69
A0A8I6AVC5	A0A8I6AVC5	A0A8I6AVC5_RAT	Ltbp3	Latent transforming growth factor beta binding protein 3	1	GYTQDNNIVNYGIPAHR	GYTQDNNIVNYGIPAHR	3	GYTQDNNIVNYGIPAHR3	3292.25	4508.73	
P01026	P01026	CO3_RAT	C3	Complement C3	1	GYTQQLAFK	GYTQQLAFK	2	GYTQQLAFK2	1.6642e+06	1.89803e+06	1.81236e+06
A0A8I6A3B1	A0A8I6A3B1	A0A8I6A3B1_RAT	Ncoa4	Nuclear receptor coactivator 4	1	GYTQVPEQK	GYTQVPEQK	2	GYTQVPEQK2	2404.81	1676.12	2729.81
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	GYTSDSEVYTDHGRPGK	GYTSDSEVYTDHGRPGK	4	GYTSDSEVYTDHGRPGK4	1105.73	3108.24	3432.21
F7F4L4	F7F4L4	F7F4L4_RAT	Dnajb12	DnaJ heat shock protein family (Hsp40) member B12	1	GYTSEQVAAVK	GYTSEQVAAVK	2	GYTSEQVAAVK2	11694.1	11071.8	14901.6
P70483	P70483	STRN_RAT	Strn	Striatin	1	GYTSIFNMETQQR	GYTSIFNMETQQR	2	GYTSIFNMETQQR2	59199.8	55611.5	59603.7
P70483	P70483	STRN_RAT	Strn	Striatin	1	GYTSIFNMETQQR	GYTSIFNMETQQR	3	GYTSIFNMETQQR3	16435	11287.3	12456.8
D4A4P4	D4A4P4	D4A4P4_RAT	Flad1	FAD synthase	1	GYTSLGSR	GYTSLGSR	2	GYTSLGSR2	10560.7	6965.9	15273.5
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	GYVCLCPPGYTGLK	GYVC(UniMod:4)LC(UniMod:4)PPGYTGLK	2	GYVC(UniMod:4)LC(UniMod:4)PPGYTGLK2	3592.59		6169.01
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	GYVLQEDGK	GYVLQEDGK	2	GYVLQEDGK2	8825.78	13016.2	7086.36
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	GYVNSSSQIK	GYVNSSSQIK	2	GYVNSSSQIK2	218749	255003	246074
P97519	P97519	HMGCL_RAT	Hmgcl	Hydroxymethylglutaryl-CoA lyase, mitochondrial	1	GYVSCALGCPYEGK	GYVSC(UniMod:4)ALGC(UniMod:4)PYEGK	2	GYVSC(UniMod:4)ALGC(UniMod:4)PYEGK2	1409.94	3492.45	2716.37
A0A0G2K2M3	A0A0G2K2M3	A0A0G2K2M3_RAT	Stat6	Signal transducer and activator of transcription	1	GYVSTTIK	GYVSTTIK	2	GYVSTTIK2	12528.6	12985.3	14576.7
B0BNL6	B0BNL6	ARRD1_RAT	Arrdc1	Arrestin domain-containing protein 1	1	GYVVGQVLR	GYVVGQVLR	2	GYVVGQVLR2	16959.4	9381.05	9644.7
Q641X3	Q641X3	HEXA_RAT	Hexa	Beta-hexosaminidase subunit alpha	1	GYVVWQEVFDNK	GYVVWQEVFDNK	2	GYVVWQEVFDNK2	20506.9	20200	15796.6
Q07977	Q07977;A1KQY6	SIA8B_RAT	St8sia2	Alpha-2,8-sialyltransferase 8B	0	GYWLTNK	GYWLTNK	2	GYWLTNK2	70573.2	71835.7	52180.4
A1KQY6	A1KQY6	A1KQY6_RAT	St8sia4	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	1	GYWLTNKVPIK	GYWLTNKVPIK	3	GYWLTNKVPIK3	9164.23	6359.77	6906.3
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	GYYAVAVVK	GYYAVAVVK	1	GYYAVAVVK1	228272	143996	170592
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	GYYAVAVVK	GYYAVAVVK	2	GYYAVAVVK2	4.73542e+06	5.14442e+06	5.29055e+06
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	GYYDNPK	GYYDNPK	1	GYYDNPK1	909.199	4315.35	3187.81
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	GYYDNPK	GYYDNPK	2	GYYDNPK2	268119	203534	303204
Q5M9F6	Q5M9F6	Q5M9F6_RAT	Mthfs	5-formyltetrahydrofolate cyclo-ligase	1	GYYDTYLK	GYYDTYLK	2	GYYDTYLK2	9241.33	7071	5148.54
P16573	P16573	CEAM1_RAT	Ceacam1	Carcinoembryonic antigen-related cell adhesion molecule 1	1	GYYECEAR	GYYEC(UniMod:4)EAR	2	GYYEC(UniMod:4)EAR2	128782	121052	147091
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	GYYEQTGVGPLPVVLFNGMPFEK	GYYEQTGVGPLPVVLFNGMPFEK	3	GYYEQTGVGPLPVVLFNGMPFEK3	7966.11	5629.18	7776.65
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	GYYYNGDSAGLPTR	GYYYNGDSAGLPTR	2	GYYYNGDSAGLPTR2	14518.7	15431.7	15091.1
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	HAAATFCSNQPFALEMIK	HAAATFC(UniMod:4)SNQPFALEMIK	3	HAAATFC(UniMod:4)SNQPFALEMIK3	50065.3	68653.6	57104.9
D3ZWS0	D3ZWS0	D3ZWS0_RAT	Scrib	Scribble planar cell polarity protein	1	HAACLVR	HAAC(UniMod:4)LVR	2	HAAC(UniMod:4)LVR2	6702.82	3035.6	
A0A8I6ASK1	A0A8I6ASK1	A0A8I6ASK1_RAT	P4ha2	procollagen-proline 4-dioxygenase	1	HAACPVLVGCK	HAAC(UniMod:4)PVLVGC(UniMod:4)K	3	HAAC(UniMod:4)PVLVGC(UniMod:4)K3	27893.7	19494.8	23277.7
P54001	P54001	P4HA1_RAT	P4ha1	Prolyl 4-hydroxylase subunit alpha-1	1	HAACPVLVGNK	HAAC(UniMod:4)PVLVGNK	2	HAAC(UniMod:4)PVLVGNK2	16200.5	7475.98	10493.3
P54001	P54001	P4HA1_RAT	P4ha1	Prolyl 4-hydroxylase subunit alpha-1	1	HAACPVLVGNK	HAAC(UniMod:4)PVLVGNK	3	HAAC(UniMod:4)PVLVGNK3	28589.5	15821.3	21201.1
D4ACC1	D4ACC1	D4ACC1_RAT	Dapp1	Dual adaptor of phosphotyrosine and 3-phosphoinositides 1	1	HAAEALLLSNGR	HAAEALLLSNGR	3	HAAEALLLSNGR3	27394	17316.4	28606.5
O54923	O54923	EXOC6_RAT	Exoc6	Exocyst complex component 6	1	HAAEGEIYTK	HAAEGEIYTK	2	HAAEGEIYTK2	3950.85	3513.11	8626.61
F1LZJ4	F1LZJ4	F1LZJ4_RAT	Hyi	Putative hydroxypyruvate isomerase	1	HAAEVLAQENLVGLLEPINTR	HAAEVLAQENLVGLLEPINTR	3	HAAEVLAQENLVGLLEPINTR3	10255.1	5164.99	5598.42
Q566R4	Q566R4	LRA25_RAT	Fam89b	Leucine repeat adapter protein 25	1	HAAGSANLGSAAGPR	HAAGSANLGSAAGPR	2	HAAGSANLGSAAGPR2	885.227	2564.67	1372.78
Q566R4	Q566R4	LRA25_RAT	Fam89b	Leucine repeat adapter protein 25	1	HAAGSANLGSAAGPR	HAAGSANLGSAAGPR	3	HAAGSANLGSAAGPR3	17560.5	23903.9	19172.9
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	HAAHPCRPCPVNPPSAIEMQLR	HAAHPC(UniMod:4)RPC(UniMod:4)PVNPPSAIEMQLR	4	HAAHPC(UniMod:4)RPC(UniMod:4)PVNPPSAIEMQLR4	11553.9	21390.3	
P07633	P07633	PCCB_RAT	Pccb	Propionyl-CoA carboxylase beta chain, mitochondrial	1	HAALLGGGQR	HAALLGGGQR	2	HAALLGGGQR2	1720.44	8397.45	3751.69
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	HAALTIQACWR	HAALTIQAC(UniMod:4)WR	3	HAALTIQAC(UniMod:4)WR3	2529.91	3386.52	5379.25
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	HAAQELATLLLSLPAPASVQQQSK	HAAQELATLLLSLPAPASVQQQSK	3	HAAQELATLLLSLPAPASVQQQSK3	29773.6	34641.2	38422.8
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	HAAQELATLLLSLPAPASVQQQSK	HAAQELATLLLSLPAPASVQQQSK	4	HAAQELATLLLSLPAPASVQQQSK4	1914.41		3103.44
A0A8I6GJC5	A0A8I6GJC5	A0A8I6GJC5_RAT	Reps1	RALBP1 associated Eps domain containing 1	1	HAASYSSDAENQSAYAGVIPPPPGR	HAASYSSDAENQSAYAGVIPPPPGR	3	HAASYSSDAENQSAYAGVIPPPPGR3	16832.3	9096.06	14267.5
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	HAAVLVETIK	HAAVLVETIK	2	HAAVLVETIK2	10620.2	11512	8233.02
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	HAAVLVETIKK	HAAVLVETIKK	3	HAAVLVETIKK3	33545.1	46587	24366.4
O08658	O08658	NUP88_RAT	Nup88	Nuclear pore complex protein Nup88	1	HAAWYPSEMLDPHIVLLTSDNVIR	HAAWYPSEMLDPHIVLLTSDNVIR	4	HAAWYPSEMLDPHIVLLTSDNVIR4	2575.63		2145.03
A0A140TAA1	A0A140TAA1	A0A140TAA1_RAT	Igsf8	Immunoglobulin superfamily, member 8	1	HAAYSVGWEMAPAGAPGPGR	HAAYSVGWEMAPAGAPGPGR	3	HAAYSVGWEMAPAGAPGPGR3		11406.2	11212.2
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	HACDLEASSDAVEPVTLTSTSSEPGK	HAC(UniMod:4)DLEASSDAVEPVTLTSTSSEPGK	3	HAC(UniMod:4)DLEASSDAVEPVTLTSTSSEPGK3	5023.69	6649.81	4735.5
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	HACVALGVTSITGVCNDR	HAC(UniMod:4)VALGVTSITGVC(UniMod:4)NDR	3	HAC(UniMod:4)VALGVTSITGVC(UniMod:4)NDR3	12681.9	10170.5	12477.9
P41565	P41565	IDHG1_RAT	Idh3g	Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial	1	HACVPVDFEEVHVSSNADEEDIR	HAC(UniMod:4)VPVDFEEVHVSSNADEEDIR	3	HAC(UniMod:4)VPVDFEEVHVSSNADEEDIR3	12234.4	12782.2	15531.4
P41565	P41565	IDHG1_RAT	Idh3g	Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial	1	HACVPVDFEEVHVSSNADEEDIR	HAC(UniMod:4)VPVDFEEVHVSSNADEEDIR	4	HAC(UniMod:4)VPVDFEEVHVSSNADEEDIR4	37537.2	27307.3	30273.9
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	HADEILLDLGHHER	HADEILLDLGHHER	3	HADEILLDLGHHER3	6479.21	7222.32	7317.49
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	HADEILLDLGHHER	HADEILLDLGHHER	4	HADEILLDLGHHER4	107652	123047	113720
Q9WUD9	Q9WUD9	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	1	HADGLCHR	HADGLC(UniMod:4)HR	2	HADGLC(UniMod:4)HR2			2376.32
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	HADHSSLTLGSGSSTTR	HADHSSLTLGSGSSTTR	2	HADHSSLTLGSGSSTTR2	3316.74	2519.92	
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	HADHSSLTLGSGSSTTR	HADHSSLTLGSGSSTTR	3	HADHSSLTLGSGSSTTR3	39190.6	24012.1	38858.1
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	HADHSSLTLGSGSSTTR	HADHSSLTLGSGSSTTR	4	HADHSSLTLGSGSSTTR4	6169.96	12297	13080.1
F1M784	F1M784	F1M784_RAT	Pik3ap1	Phosphoinositide-3-kinase adaptor protein 1	1	HADLEITVPIR	HADLEITVPIR	3	HADLEITVPIR3	19503.4	21266.8	16937.9
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	HADNMPK	HADNMPK	2	HADNMPK2			31322.8
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	HADPEFTK	HADPEFTK	1	HADPEFTK1	155088	176032	148697
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	HADPEFTK	HADPEFTK	2	HADPEFTK2	18879.7		81813.6
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	HADPEFTKK	HADPEFTKK	2	HADPEFTKK2			1.37728e+06
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	HADPEFTKKLWAYLTVNQLLTER	HADPEFTKKLWAYLTVNQLLTER	4	HADPEFTKKLWAYLTVNQLLTER4	23822.9	15507	17850.4
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	HADQEIR	HADQEIR	2	HADQEIR2			135082
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	HADSAEVEATAR	HADSAEVEATAR	2	HADSAEVEATAR2	3372.32	3126.49	
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	HADSAEVEATAR	HADSAEVEATAR	3	HADSAEVEATAR3	15106.1	30408.9	15205.1
Q29RW1	P02563;P02564;Q29RW1	MYH4_RAT	Myh4	Myosin-4	0	HADSVAELGEQIDNLQR	HADSVAELGEQIDNLQR	3	HADSVAELGEQIDNLQR3	7224.66		
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	HADTFLER	HADTFLER	2	HADTFLER2	16560.4	14469.4	10492.7
Q0D2L2	Q0D2L2	Q0D2L2_RAT	Mrps22	Mitochondrial ribosomal protein S22	1	HADVLNLCVAQFEPDSTEYIK	HADVLNLC(UniMod:4)VAQFEPDSTEYIK	3	HADVLNLC(UniMod:4)VAQFEPDSTEYIK3	5149	6389.42	4584.49
Q08603	Q08603	PGTB2_RAT	Rabggtb	Geranylgeranyl transferase type-2 subunit beta	1	HADYIASYGSK	HADYIASYGSK	2	HADYIASYGSK2	4654.97	3254.66	3281.95
Q08603	Q08603	PGTB2_RAT	Rabggtb	Geranylgeranyl transferase type-2 subunit beta	1	HADYIASYGSK	HADYIASYGSK	3	HADYIASYGSK3	4928.46	10621	6690.43
P14046	Q6IE52;A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	HAEAHHTAYAVYSLSK	HAEAHHTAYAVYSLSK	2	HAEAHHTAYAVYSLSK2	3.24741e+06	3.03479e+06	2.3787e+06
P14046	Q6IE52;A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	HAEAHHTAYAVYSLSK	HAEAHHTAYAVYSLSK	3	HAEAHHTAYAVYSLSK3	1.04867e+06	988182	873816
P14046	Q6IE52;A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	HAEAHHTAYAVYSLSK	HAEAHHTAYAVYSLSK	4	HAEAHHTAYAVYSLSK4	62367	56006.6	51025
Q3T1J9	Q3T1J9;A0A8I6AAQ1;A0A8I5ZK61	MOB1A_RAT	Mob1a	MOB kinase activator 1A	0	HAEATLGSGNLR	HAEATLGSGNLR	2	HAEATLGSGNLR2	22637.6	17527.7	22713.9
Q3T1J9	Q3T1J9;A0A8I6AAQ1;A0A8I5ZK61	MOB1A_RAT	Mob1a	MOB kinase activator 1A	0	HAEATLGSGNLR	HAEATLGSGNLR	3	HAEATLGSGNLR3	101123	93979.7	139653
O70593	O70593	SGTA_RAT	Sgta	Small glutamine-rich tetratricopeptide repeat-containing protein alpha	1	HAEAVAYYK	HAEAVAYYK	2	HAEAVAYYK2	96828.4	96601.9	97582.2
O70593	O70593	SGTA_RAT	Sgta	Small glutamine-rich tetratricopeptide repeat-containing protein alpha	1	HAEAVAYYKK	HAEAVAYYKK	3	HAEAVAYYKK3	3987.65	5021.4	13818.3
D4A2G6	D4A2G6	D4A2G6_RAT	Thbs2	Thrombospondin 2	1	HAECIYLGHFSDPMYK	HAEC(UniMod:4)IYLGHFSDPMYK	3	HAEC(UniMod:4)IYLGHFSDPMYK3	23178.6	21829.5	20716
D4A2G6	D4A2G6	D4A2G6_RAT	Thbs2	Thrombospondin 2	1	HAECIYLGHFSDPMYK	HAEC(UniMod:4)IYLGHFSDPMYK	4	HAEC(UniMod:4)IYLGHFSDPMYK4	8238.8	11416.6	7937.92
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	HAEEHHTAYAVYSLSK	HAEEHHTAYAVYSLSK	2	HAEEHHTAYAVYSLSK2	34013.1	30436.8	16759.1
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	HAEEHHTAYAVYSLSK	HAEEHHTAYAVYSLSK	3	HAEEHHTAYAVYSLSK3	332742	207911	137405
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	HAEEHHTAYAVYSLSK	HAEEHHTAYAVYSLSK	4	HAEEHHTAYAVYSLSK4	1.53859e+06	1.53721e+06	1.00893e+06
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	HAEFESLCAQYSADK	HAEFESLC(UniMod:4)AQYSADK	3	HAEFESLC(UniMod:4)AQYSADK3	12486	24519.2	19258.8
P06883	P06883	GLUC_RAT	Gcg	Pro-glucagon	1	HAEGTFTSDVSSYLEGQAAK	HAEGTFTSDVSSYLEGQAAK	3	HAEGTFTSDVSSYLEGQAAK3	4898.06	10298.3	7518.62
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	HAEGTILHR	HAEGTILHR	2	HAEGTILHR2		5277.4	
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	HAELANEYAGFLMALGLNGHLTK	HAELANEYAGFLMALGLNGHLTK	3	HAELANEYAGFLMALGLNGHLTK3		1019.11	
F1MA46	F1MA46	F1MA46_RAT	Pcdh12	Protocadherin 12	1	HAELVVVK	HAELVVVK	2	HAELVVVK2	70039.4	91106.9	83839.1
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	HAEMVHTGLK	HAEMVHTGLK	2	HAEMVHTGLK2	44332.6	90547.3	55589.6
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	HAEMVHTGLKLER	HAEMVHTGLKLER	4	HAEMVHTGLKLER4	4525.44	3535.27	5373.73
Q9JLT0	Q9JLT0	MYH10_RAT	Myh10	Myosin-10	1	HAEQERDELADEIANSASGK	HAEQERDELADEIANSASGK	4	HAEQERDELADEIANSASGK4	10339.2	1883.44	5293.78
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	HAFCTDYTTGFCCHCQSR	HAFC(UniMod:4)TDYTTGFC(UniMod:4)C(UniMod:4)HC(UniMod:4)QSR	3	HAFC(UniMod:4)TDYTTGFC(UniMod:4)C(UniMod:4)HC(UniMod:4)QSR3	5680.99	2714.12	1807.56
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	HAFCTDYTTGFCCHCQSR	HAFC(UniMod:4)TDYTTGFC(UniMod:4)C(UniMod:4)HC(UniMod:4)QSR	4	HAFC(UniMod:4)TDYTTGFC(UniMod:4)C(UniMod:4)HC(UniMod:4)QSR4	11530.8	9009.2	8181.4
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	HAFEIFR	HAFEIFR	2	HAFEIFR2	15947.3	22564.1	10989.7
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	HAFFEGLNWENIR	HAFFEGLNWENIR	2	HAFFEGLNWENIR2	9408.79	11481.4	9782.71
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	HAFFEGLNWENIR	HAFFEGLNWENIR	3	HAFFEGLNWENIR3	46533.1	46329.9	57692
P15651	P15651	ACADS_RAT	Acads	Short-chain specific acyl-CoA dehydrogenase, mitochondrial	1	HAFGAPLTK	HAFGAPLTK	2	HAFGAPLTK2	16120.2	7800.25	12684.8
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	HAFILQDAK	HAFILQDAK	2	HAFILQDAK2	35332.2	38381.5	29243.1
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	HAFNTAQCMFAALK	HAFNTAQC(UniMod:4)MFAALK	2	HAFNTAQC(UniMod:4)MFAALK2	40109.8	39888.5	32133.9
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	HAFNTAQCMFAALK	HAFNTAQC(UniMod:4)MFAALK	3	HAFNTAQC(UniMod:4)MFAALK3	255364	303382	282853
Q6AXQ4	Q6AXQ4	MTM1_RAT	Mtm1	Myotubularin	1	HAFPLAYNLPLFAFVNEEK	HAFPLAYNLPLFAFVNEEK	3	HAFPLAYNLPLFAFVNEEK3	2617.77	3148.98	
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	HAFSPVASVESASGEVLHSPK	HAFSPVASVESASGEVLHSPK	3	HAFSPVASVESASGEVLHSPK3	8.48916e+06	8.16083e+06	8.38039e+06
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	HAFSPVASVESASGEVLHSPK	HAFSPVASVESASGEVLHSPK	4	HAFSPVASVESASGEVLHSPK4	2.28805e+06	2.28546e+06	2.5356e+06
A0A8I5ZSU2	A0A8I5ZSU2	A0A8I5ZSU2_RAT	Ccm2l	CCM2 like scaffold protein	1	HAGGGAGKPGGSWER	HAGGGAGKPGGSWER	3	HAGGGAGKPGGSWER3	6842.91	3198.81	4584.82
Q9Z244	Q9Z244	GMPR1_RAT	Gmpr	GMP reductase 1	1	HAGGVAEYR	HAGGVAEYR	2	HAGGVAEYR2	66485.7	115736	105652
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	HAGGVLGGWDNLLAVIPGGSSTPLIPK	HAGGVLGGWDNLLAVIPGGSSTPLIPK	3	HAGGVLGGWDNLLAVIPGGSSTPLIPK3	32881.6	27117.6	26182.3
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	HAHEMMLK	HAHEMMLK	2	HAHEMMLK2	1080.1		
D3ZX38	D3ZX38	D3ZX38_RAT	Pfdn1	Prefoldin subunit 1	1	HAHLTDTEIMTLVDETNMYEGVGR	HAHLTDTEIMTLVDETNMYEGVGR	3	HAHLTDTEIMTLVDETNMYEGVGR3	15231.4	6263.91	10504.5
D3ZX38	D3ZX38	D3ZX38_RAT	Pfdn1	Prefoldin subunit 1	1	HAHLTDTEIMTLVDETNMYEGVGR	HAHLTDTEIMTLVDETNMYEGVGR	4	HAHLTDTEIMTLVDETNMYEGVGR4	24375.8	24867.8	29442.8
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	HAHSILQFQFAEVK	HAHSILQFQFAEVK	2	HAHSILQFQFAEVK2	5021.61		9791.52
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	HAHSILQFQFAEVK	HAHSILQFQFAEVK	3	HAHSILQFQFAEVK3	79698.5	80283.1	86372.5
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	HAHSILQFQFAEVK	HAHSILQFQFAEVK	4	HAHSILQFQFAEVK4	14251.7	13871.9	15058.1
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	HAICEIAVNYK	HAIC(UniMod:4)EIAVNYK	2	HAIC(UniMod:4)EIAVNYK2	5098.8	3961.93	5125.36
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	HAICEIAVNYK	HAIC(UniMod:4)EIAVNYK	3	HAIC(UniMod:4)EIAVNYK3	13176.3	19017.2	13387
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	HAIILLTDGK	HAIILLTDGK	2	HAIILLTDGK2	42194	45188.2	33925.2
Q4AEG6	Q4AEG6	BMP10_RAT	Bmp10	Bone morphogenetic protein 10	1	HAIIQALVHLK	HAIIQALVHLK	3	HAIIQALVHLK3	10204.2	7212.94	8707.17
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	HAIPIIK	HAIPIIK	2	HAIPIIK2	34341.7	25181.9	34231.3
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	HAIPNLVK	HAIPNLVK	2	HAIPNLVK2	16840.5	16447.9	16865.5
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	HAIVICNR	HAIVIC(UniMod:4)NR	2	HAIVIC(UniMod:4)NR2	195600	125441	97714.7
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	HAIVICNRK	HAIVIC(UniMod:4)NRK	2	HAIVIC(UniMod:4)NRK2	1961.35		
M0RB87	M0RB87	M0RB87_RAT	Gdf2	Growth differentiation factor 2	1	HAIVQTLVHLK	HAIVQTLVHLK	3	HAIVQTLVHLK3	7427.25	7601.81	9269.83
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	HALAGLFVEILVPVAATVK	HALAGLFVEILVPVAATVK	3	HALAGLFVEILVPVAATVK3	3732.06	2031.21	5063.85
A0A8I6GJ51	A0A8I6GJ51	A0A8I6GJ51_RAT	Ccdc85a	Coiled-coil domain containing 85A	1	HALGGSLEHLPR	HALGGSLEHLPR	3	HALGGSLEHLPR3	7028.19	4912.32	3397.89
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	HALGSHEYIQHCR	HALGSHEYIQHC(UniMod:4)R	3	HALGSHEYIQHC(UniMod:4)R3	3472.52		1912.26
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	HALHCTILASAGQQR	HALHC(UniMod:4)TILASAGQQR	2	HALHC(UniMod:4)TILASAGQQR2	2598.8	2016.34	4588.54
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	HALHCTILASAGQQR	HALHC(UniMod:4)TILASAGQQR	3	HALHC(UniMod:4)TILASAGQQR3	90298	67479	65946.5
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	HALHCTILASAGQQR	HALHC(UniMod:4)TILASAGQQR	4	HALHC(UniMod:4)TILASAGQQR4	55767.1	50402.9	37358.9
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	HALIIYDDLSK	HALIIYDDLSK	2	HALIIYDDLSK2	710991	20543	657246
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	HALIIYDDLSK	HALIIYDDLSK	3	HALIIYDDLSK3	123987	141944	176516
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	HALLEADVAAHQDR	HALLEADVAAHQDR	2	HALLEADVAAHQDR2	8272.85	5603.08	3499.16
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	HALLEADVAAHQDR	HALLEADVAAHQDR	3	HALLEADVAAHQDR3	46483.2	34300.4	51000
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	HALLEADVAAHQDR	HALLEADVAAHQDR	4	HALLEADVAAHQDR4	11796.3	13558.2	22859.8
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	HALLEADVAAHQDRIDGITIQAR	HALLEADVAAHQDRIDGITIQAR	3	HALLEADVAAHQDRIDGITIQAR3	11967.1	5177.54	8041.41
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	HALLEADVAAHQDRIDGITIQAR	HALLEADVAAHQDRIDGITIQAR	4	HALLEADVAAHQDRIDGITIQAR4	150534	163120	167269
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	HALLSLVR	HALLSLVR	2	HALLSLVR2	18996	25998.5	16961.1
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	HALPLVGHR	HALPLVGHR	2	HALPLVGHR2	86178.6	75676.5	74956.7
Q9Z2X5	Q9Z2X5	HOME3_RAT	Homer3	Homer protein homolog 3	1	HALTVSYFYDATR	HALTVSYFYDATR	3	HALTVSYFYDATR3	6791.59	7481.16	7216.72
Q66H91	Q66H91	GIT2_RAT	Git2	ARF GTPase-activating protein GIT2	1	HALVASEAK	HALVASEAK	2	HALVASEAK2	4840.75	11921.3	9037.34
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	HALVEADIAIQAER	HALVEADIAIQAER	2	HALVEADIAIQAER2	9824.89	7304.19	3853.91
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	HALVEADIAIQAER	HALVEADIAIQAER	3	HALVEADIAIQAER3	119353	140106	103163
F1M9Q3	F1M9Q3	F1M9Q3_RAT	Ltn1	E3 ubiquitin-protein ligase listerin	1	HALVTPWLK	HALVTPWLK	2	HALVTPWLK2		7350	7093.55
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	HALWPSLPDLHR	HALWPSLPDLHR	3	HALWPSLPDLHR3	10133	10121.7	8032.87
B5DFL3	B5DFL3	B5DFL3_RAT	Itgb1bp1	Integrin subunit beta 1 binding protein 1	1	HALYLIIR	HALYLIIR	2	HALYLIIR2	3107.11	6413.83	3072.53
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	HAMEQRPSQELLWDLQQER	HAMEQRPSQELLWDLQQER	3	HAMEQRPSQELLWDLQQER3	10063.6	3795.59	4306.65
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	HAMEQRPSQELLWDLQQER	HAMEQRPSQELLWDLQQER	4	HAMEQRPSQELLWDLQQER4	50721.1	62072	45604.1
A0A8I5ZN89	A0A8I5ZN89	A0A8I5ZN89_RAT	Gcdh	Glutaryl-CoA dehydrogenase	1	HAMNLEAVNTYEGTHDIHALILGR	HAMNLEAVNTYEGTHDIHALILGR	4	HAMNLEAVNTYEGTHDIHALILGR4	8966.92	9934.21	
Q63686	Q63686	CDK16_RAT	Cdk16	Cyclin-dependent kinase 16	1	HANIVTLHDIIHTEK	HANIVTLHDIIHTEK	3	HANIVTLHDIIHTEK3	2205.25		
Q63686	Q63686	CDK16_RAT	Cdk16	Cyclin-dependent kinase 16	1	HANIVTLHDIIHTEK	HANIVTLHDIIHTEK	4	HANIVTLHDIIHTEK4	4857.16	5990.9	5454.33
O35831	O35831	CDK17_RAT	Cdk17	Cyclin-dependent kinase 17	1	HANIVTLHDIVHTDK	HANIVTLHDIVHTDK	4	HANIVTLHDIVHTDK4	2934.12	2647.58	3461.65
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	HANWTLTPLK	HANWTLTPLK	2	HANWTLTPLK2	996656	1.09357e+06	1.05812e+06
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	HANWTLTPLK	HANWTLTPLK	3	HANWTLTPLK3	80068.6	69263.1	75936
Q32KK0	Q32KK0	Q32KK0_RAT	Arsl	Arylsulfatase E	1	HAPFLLFLSLLHTHTPLVTSPEFR	HAPFLLFLSLLHTHTPLVTSPEFR	4	HAPFLLFLSLLHTHTPLVTSPEFR4	3106.35		3023.69
Q4V8K5	Q4V8K5	BROX_RAT	Brox	BRO1 domain-containing protein BROX	1	HAPGLIAALAYETASFYQK	HAPGLIAALAYETASFYQK	3	HAPGLIAALAYETASFYQK3	5867.85	5011.54	4194.61
Q2LC84	Q2LC84	NUMB_RAT	Numb	Protein numb homolog	1	HAPIEQLAR	HAPIEQLAR	2	HAPIEQLAR2	35051.6	29391.9	34087.8
D3ZQ30	D3ZQ30	D3ZQ30_RAT	Telo2	Telomere length regulation protein TEL2 homolog	1	HAPLEQQCYISK	HAPLEQQC(UniMod:4)YISK	3	HAPLEQQC(UniMod:4)YISK3		2740.7	
Q5I0C3	Q5I0C3	MCCA_RAT	Mccc1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	1	HAPLVEFEEEEV	HAPLVEFEEEEV	2	HAPLVEFEEEEV2	7760.62	4424.62	8360.88
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	HAPPLLR	HAPPLLR	2	HAPPLLR2	18646.5	11039.3	18731.5
D3ZE72	D3ZE72	D3ZE72_RAT	Metap1	Methionine aminopeptidase	1	HAQANGFSVVR	HAQANGFSVVR	2	HAQANGFSVVR2	2097.54	2040.41	2132.02
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	HAQCLLR	HAQC(UniMod:4)LLR	2	HAQC(UniMod:4)LLR2	15690.6	27534.3	23328.1
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	HAQFLLVNFNHIHK	HAQFLLVNFNHIHK	3	HAQFLLVNFNHIHK3	2713.29	1893.6	4990.8
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	HAQFLLVNFNHIHK	HAQFLLVNFNHIHK	4	HAQFLLVNFNHIHK4	18953	14729.5	12459
A0A0G2K528	A0A0G2K528	A0A0G2K528_RAT	Stx16	Syntaxin 16	1	HAQSDYLK	HAQSDYLK	2	HAQSDYLK2	14678.4	17828.6	15451
M0R7E7	M0R7E7	M0R7E7_RAT	Map2k3	Mitogen activated protein kinase kinase 3	1	HAQSGTIMAVK	HAQSGTIMAVK	2	HAQSGTIMAVK2	7485.79	4885.37	1690.98
G3V8Z6	G3V8Z6	G3V8Z6_RAT	Krit1	KRIT1, ankyrin repeat containing	1	HAQSHFIPALFR	HAQSHFIPALFR	3	HAQSHFIPALFR3	10260.7	6670.13	12507.9
G3V8Z6	G3V8Z6	G3V8Z6_RAT	Krit1	KRIT1, ankyrin repeat containing	1	HAQSHFIPALFRPSPLER	HAQSHFIPALFRPSPLER	4	HAQSHFIPALFRPSPLER4	30039.3	29525.2	21787.5
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	HAQVIAGR	HAQVIAGR	2	HAQVIAGR2	6405.72		1900.76
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	HASAAGFPLSGTATR	HASAAGFPLSGTATR	2	HASAAGFPLSGTATR2	90562.8	96115.9	81122.3
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	HASAAGFPLSGTATR	HASAAGFPLSGTATR	3	HASAAGFPLSGTATR3	1.09441e+06	1.21094e+06	1.12368e+06
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	HASATVFSDTVVVSEK	HASATVFSDTVVVSEK	3	HASATVFSDTVVVSEK3	10647	8325.36	12380.6
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	HASILVHCR	HASILVHC(UniMod:4)R	2	HASILVHC(UniMod:4)R2	5954.67	2667.92	5484.32
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	HASNMLGELR	HASNMLGELR	2	HASNMLGELR2	19273.7	29092.3	19749.7
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	HASNTPEESSVYEDESSVASMPR	HASNTPEESSVYEDESSVASMPR	3	HASNTPEESSVYEDESSVASMPR3	5377.31	8816.82	8272.14
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	HASNTPEESSVYEDESSVASMPRPLR	HASNTPEESSVYEDESSVASMPRPLR	4	HASNTPEESSVYEDESSVASMPRPLR4	29887.9	36856	21638.4
Q6AYU3	A0A8I5ZVZ1;Q6AYU3;A0A8I5ZLJ4	DNJB6_RAT	Dnajb6	DnaJ homolog subfamily B member 6	0	HASPEDIK	HASPEDIK	2	HASPEDIK2	2817.54		2995.56
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	HASSGSTVHIHPQAAPVVCR	HASSGSTVHIHPQAAPVVC(UniMod:4)R	3	HASSGSTVHIHPQAAPVVC(UniMod:4)R3	3626.69	5534.95	3575.74
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	HASSGSTVHIHPQAAPVVCR	HASSGSTVHIHPQAAPVVC(UniMod:4)R	4	HASSGSTVHIHPQAAPVVC(UniMod:4)R4	27727.7	26779.5	32654.9
Q9JLT0	Q9JLT0	MYH10_RAT	Myh10	Myosin-10	1	HATALEELSEQLEQAK	HATALEELSEQLEQAK	3	HATALEELSEQLEQAK3	3678.37	6188.55	2866.88
D4A8N1	D4A8N1	D4A8N1_RAT	Dpm1	Dolichol-phosphate mannosyltransferase subunit 1	1	HATGNYVIIMDADLSHHPK	HATGNYVIIMDADLSHHPK	3	HATGNYVIIMDADLSHHPK3	2469.08	2124.01	
D4A8N1	D4A8N1	D4A8N1_RAT	Dpm1	Dolichol-phosphate mannosyltransferase subunit 1	1	HATGNYVIIMDADLSHHPK	HATGNYVIIMDADLSHHPK	4	HATGNYVIIMDADLSHHPK4	20302.3	36235.4	38854.4
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	HATLLGVVK	HATLLGVVK	2	HATLLGVVK2	4248.54	4933.43	4057.9
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	HATLSLNIPR	HATLSLNIPR	2	HATLSLNIPR2	311591	288269	276504
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	HATLWDAVGHR	HATLWDAVGHR	3	HATLWDAVGHR3	11991.3	11306.7	6648.99
Q5RJY4	Q5RJY4	DRS7B_RAT	Dhrs7b	Dehydrogenase/reductase SDR family member 7B	1	HATQAFFDCLR	HATQAFFDC(UniMod:4)LR	3	HATQAFFDC(UniMod:4)LR3	21655.5	12080.4	15026.7
O88483	O88483	PDP1_RAT	Pdp1	[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial	1	HAVGNNEFGAVDHER	HAVGNNEFGAVDHER	3	HAVGNNEFGAVDHER3	2371.85	6899.19	6814.88
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	HAVLALLK	HAVLALLK	2	HAVLALLK2	3698.81	2968.09	3343.87
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	HAVSDPSILDSLDLNEDER	HAVSDPSILDSLDLNEDER	3	HAVSDPSILDSLDLNEDER3	13689.6	4098.05	9833.14
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	HAVSDPSILDSLDLNEDEREVLINNINR	HAVSDPSILDSLDLNEDEREVLINNINR	4	HAVSDPSILDSLDLNEDEREVLINNINR4	25921.8	24659.1	21679.9
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	HAVSDPSILDSLDLNEDEREVLINNINRR	HAVSDPSILDSLDLNEDEREVLINNINRR	4	HAVSDPSILDSLDLNEDEREVLINNINRR4	30184.5	30611.2	23838.3
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	HAVTEAEIQQLK	HAVTEAEIQQLK	3	HAVTEAEIQQLK3	9186.95	8877.75	10298.8
P18665	P18665	RM03_RAT	Mrpl3	Large ribosomal subunit protein uL3m	1	HAVTLLQVQDCHVLK	HAVTLLQVQDC(UniMod:4)HVLK	3	HAVTLLQVQDC(UniMod:4)HVLK3	2348.63	4805.65	7893.09
Q9JHW5	Q9JHW5	VAMP7_RAT	Vamp7	Vesicle-associated membrane protein 7	1	HAWCGGNFLEVTEQILAK	HAWC(UniMod:4)GGNFLEVTEQILAK	3	HAWC(UniMod:4)GGNFLEVTEQILAK3	77177.2	48386.3	72726.3
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	HAYDLIQK	HAYDLIQK	2	HAYDLIQK2	8244.2	8701.61	3911.43
P41562	P41562	IDHC_RAT	Idh1	Isocitrate dehydrogenase [NADP] cytoplasmic	1	HAYGDQYR	HAYGDQYR	2	HAYGDQYR2	23259		8000.12
A0A1W2Q6I2	A0A1W2Q6I2	A0A1W2Q6I2_RAT	Otud6b	ubiquitinyl hydrolase 1	1	HAYGLGEHYNSVTR	HAYGLGEHYNSVTR	3	HAYGLGEHYNSVTR3	7085.39	2918.5	4926.29
D4A929	D4A929	WDR81_RAT	Wdr81	WD repeat-containing protein 81	1	HAYHTYGQPYSHSTAPSAIPALDSIR	HAYHTYGQPYSHSTAPSAIPALDSIR	4	HAYHTYGQPYSHSTAPSAIPALDSIR4		7025.65	8004.88
A0A0G2QC40	Q5XI23;A0A8I6B298;A0A0G2QC40	A0A0G2QC40_RAT	Mkrn1	RING-type E3 ubiquitin transferase	0	HAYPDGR	HAYPDGR	2	HAYPDGR2			5615.49
Q05695	Q05695	L1CAM_RAT	L1cam	Neural cell adhesion molecule L1	1	HAYYVTVEAAPYWLQKPQSHLYGPGETAR	HAYYVTVEAAPYWLQKPQSHLYGPGETAR	4	HAYYVTVEAAPYWLQKPQSHLYGPGETAR4	21493.1	19511.4	12349.1
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	HCATFQKPK	HC(UniMod:4)ATFQKPK	2	HC(UniMod:4)ATFQKPK2			8406.74
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	HCAYSLPGVALTLGR	HC(UniMod:4)AYSLPGVALTLGR	2	HC(UniMod:4)AYSLPGVALTLGR2	1532	2234.71	
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	HCAYSLPGVALTLGR	HC(UniMod:4)AYSLPGVALTLGR	3	HC(UniMod:4)AYSLPGVALTLGR3	17917.5	25687.1	22606
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	HCCISYLK	HC(UniMod:4)C(UniMod:4)ISYLK	2	HC(UniMod:4)C(UniMod:4)ISYLK2	43669.9	44726	32888.3
P23785	P23785	GRN_RAT	Grn	Progranulin	1	HCCPIGFHCSAK	HC(UniMod:4)C(UniMod:4)PIGFHC(UniMod:4)SAK	3	HC(UniMod:4)C(UniMod:4)PIGFHC(UniMod:4)SAK3	36295.2	35458	15331.6
D3ZHQ1	D3ZHQ1	D3ZHQ1_RAT	Dpp8	Dipeptidylpeptidase 8	1	HCDFFISK	HC(UniMod:4)DFFISK	2	HC(UniMod:4)DFFISK2	9068.01	12927.6	6266.54
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	HCDLQVR	HC(UniMod:4)DLQVR	2	HC(UniMod:4)DLQVR2	76171.8	72258.2	73459.5
D3Z9L0	D3Z9L0	D3Z9L0_RAT	Agk	Acylglycerol kinase, mitochondrial	1	HCDNLLR	HC(UniMod:4)DNLLR	2	HC(UniMod:4)DNLLR2	7039.91	7457.11	7586.68
O35757	O35757	VEGFC_RAT	Vegfc	Vascular endothelial growth factor C	1	HCDPGLSFSEEVCR	HC(UniMod:4)DPGLSFSEEVC(UniMod:4)R	3	HC(UniMod:4)DPGLSFSEEVC(UniMod:4)R3		1450.37	6513.52
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	HCDSINSDFGSESGGGGDSGSGPSASPGPR	HC(UniMod:4)DSINSDFGSESGGGGDSGSGPSASPGPR	3	HC(UniMod:4)DSINSDFGSESGGGGDSGSGPSASPGPR3	14737.8	22966.6	19414.1
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	HCEAMETR	HC(UniMod:4)EAMETR	2	HC(UniMod:4)EAMETR2			8187.19
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	HCECSTDEVNSEDMDAYCR	HC(UniMod:4)EC(UniMod:4)STDEVNSEDMDAYC(UniMod:4)R	3	HC(UniMod:4)EC(UniMod:4)STDEVNSEDMDAYC(UniMod:4)R3	169422	163792	203624
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	HCECSTDEVNSEDMDAYCRK	HC(UniMod:4)EC(UniMod:4)STDEVNSEDMDAYC(UniMod:4)RK	3	HC(UniMod:4)EC(UniMod:4)STDEVNSEDMDAYC(UniMod:4)RK3	226.273	6566.71	2605.6
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	HCECSTDEVNSEDMDAYCRK	HC(UniMod:4)EC(UniMod:4)STDEVNSEDMDAYC(UniMod:4)RK	4	HC(UniMod:4)EC(UniMod:4)STDEVNSEDMDAYC(UniMod:4)RK4	16391.5	16009.5	29107.6
B4F785	B4F785	EGFLA_RAT	Egflam	Pikachurin	1	HCEDAFTLTIPQFR	HC(UniMod:4)EDAFTLTIPQFR	3	HC(UniMod:4)EDAFTLTIPQFR3		3941.79	
Q63369	Q63369	NFKB1_RAT	Nfkb1	Nuclear factor NF-kappa-B p105 subunit	1	HCEDGICTVTAGPK	HC(UniMod:4)EDGIC(UniMod:4)TVTAGPK	3	HC(UniMod:4)EDGIC(UniMod:4)TVTAGPK3	11375.5	15996	8979.95
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	HCEDVNECETR	HC(UniMod:4)EDVNEC(UniMod:4)ETR	2	HC(UniMod:4)EDVNEC(UniMod:4)ETR2			13942.5
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	HCEDVNECETR	HC(UniMod:4)EDVNEC(UniMod:4)ETR	3	HC(UniMod:4)EDVNEC(UniMod:4)ETR3			99086.4
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	HCEDVNECETRR	HC(UniMod:4)EDVNEC(UniMod:4)ETRR	2	HC(UniMod:4)EDVNEC(UniMod:4)ETRR2			2101.42
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	HCEDVNECETRR	HC(UniMod:4)EDVNEC(UniMod:4)ETRR	3	HC(UniMod:4)EDVNEC(UniMod:4)ETRR3			12638.3
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	HCEDVNECETRR	HC(UniMod:4)EDVNEC(UniMod:4)ETRR	4	HC(UniMod:4)EDVNEC(UniMod:4)ETRR4			11131
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	HCEIAPSPCFR	HC(UniMod:4)EIAPSPC(UniMod:4)FR	2	HC(UniMod:4)EIAPSPC(UniMod:4)FR2	13386.2	15247.3	11304.8
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	HCEIAPSPCFR	HC(UniMod:4)EIAPSPC(UniMod:4)FR	3	HC(UniMod:4)EIAPSPC(UniMod:4)FR3	45721.4	41714.7	50809.6
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	HCELACEK	HC(UniMod:4)ELAC(UniMod:4)EK	2	HC(UniMod:4)ELAC(UniMod:4)EK2			2630.5
A0A8I6AHI1	A0A8I6AHI1	A0A8I6AHI1_RAT	Cd40	Tumor necrosis factor receptor superfamily member 5	1	HCELNQGLQVK	HC(UniMod:4)ELNQGLQVK	3	HC(UniMod:4)ELNQGLQVK3		2933.55	3836.41
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	HCETCISGFYGDPTNGGK	HC(UniMod:4)ETC(UniMod:4)ISGFYGDPTNGGK	3	HC(UniMod:4)ETC(UniMod:4)ISGFYGDPTNGGK3	29006.2	29340.7	31647.2
A0A0G2K7G2	A0A0G2K7G2	A0A0G2K7G2_RAT	Agfg2	ArfGAP with FG repeats 2	1	HCFECAQR	HC(UniMod:4)FEC(UniMod:4)AQR	2	HC(UniMod:4)FEC(UniMod:4)AQR2	6464.68		2968.25
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	HCFLTVEK	HC(UniMod:4)FLTVEK	2	HC(UniMod:4)FLTVEK2	6.82985e+06	7.40518e+06	6.50438e+06
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	HCFYGLQPDSEYK	HC(UniMod:4)FYGLQPDSEYK	3	HC(UniMod:4)FYGLQPDSEYK3	36746.6	51304.4	57365.2
Q6PEB9	Q6PEB9	CC127_RAT	Ccdc127	Coiled-coil domain-containing protein 127	1	HCGDVWNTNKR	HC(UniMod:4)GDVWNTNKR	3	HC(UniMod:4)GDVWNTNKR3	3996.27	3960.02	2414.51
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	HCGNIAPPTIISSGSVLYIK	HC(UniMod:4)GNIAPPTIISSGSVLYIK	3	HC(UniMod:4)GNIAPPTIISSGSVLYIK3	81351.9	97694.4	102096
F1LZ05	F1LZ05	F1LZ05_RAT	Parp14	Poly [ADP-ribose] polymerase	1	HCHCELTWSEINGK	HC(UniMod:4)HC(UniMod:4)ELTWSEINGK	3	HC(UniMod:4)HC(UniMod:4)ELTWSEINGK3	1071.7	1471.59	
Q6P9U3	Q6P9U3	COMD3_RAT	Commd3	COMM domain-containing protein 3	1	HCHGAAATYILEAGK	HC(UniMod:4)HGAAATYILEAGK	3	HC(UniMod:4)HGAAATYILEAGK3	2370.21	3518.71	
Q62696	Q63622;Q62936;Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	0	HCILDVSGNAIK	HC(UniMod:4)ILDVSGNAIK	2	HC(UniMod:4)ILDVSGNAIK2	1038.03	6047.45	2396.82
Q62696	Q63622;Q62936;Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	0	HCILDVSGNAIK	HC(UniMod:4)ILDVSGNAIK	3	HC(UniMod:4)ILDVSGNAIK3	24842.4	29563.8	16638.5
P47824	P47824	P2RX1_RAT	P2rx1	P2X purinoceptor 1	1	HCKPIYQFHGLYGEK	HC(UniMod:4)KPIYQFHGLYGEK	2	HC(UniMod:4)KPIYQFHGLYGEK2	4903.65	4918.54	
P47824	P47824	P2RX1_RAT	P2rx1	P2X purinoceptor 1	1	HCKPIYQFHGLYGEK	HC(UniMod:4)KPIYQFHGLYGEK	3	HC(UniMod:4)KPIYQFHGLYGEK3		16145	14029.2
P47824	P47824	P2RX1_RAT	P2rx1	P2X purinoceptor 1	1	HCKPIYQFHGLYGEK	HC(UniMod:4)KPIYQFHGLYGEK	4	HC(UniMod:4)KPIYQFHGLYGEK4	109131	122926	109099
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	HCLQEAMR	HC(UniMod:4)LQEAMR	2	HC(UniMod:4)LQEAMR2	4967.73	7608.22	7045.48
Q4G074	Q4G074	KBP_RAT	Kifbp	KIF-binding protein	1	HCLSAANVIFGQTGK	HC(UniMod:4)LSAANVIFGQTGK	3	HC(UniMod:4)LSAANVIFGQTGK3	6034.43	6329.56	
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	HCLVPTSPEQHVEMDK	HC(UniMod:4)LVPTSPEQHVEMDK	4	HC(UniMod:4)LVPTSPEQHVEMDK4	6986.91	5395.34	10722.6
B5DEY9	B5DEY9	B5DEY9_RAT	Csgalnact1	Hexosyltransferase	1	HCMDELTPEQYR	HC(UniMod:4)MDELTPEQYR	3	HC(UniMod:4)MDELTPEQYR3	5958.98	5555	7158.99
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	HCNGVDWR	HC(UniMod:4)NGVDWR	2	HC(UniMod:4)NGVDWR2	60808	54956.8	50193.3
D4A2W1	D4A2W1	D4A2W1_RAT	Enpp4	Ectonucleotide pyrophosphatase/phosphodiesterase 4	1	HCNPHMTVYLK	HC(UniMod:4)NPHMTVYLK	3	HC(UniMod:4)NPHMTVYLK3	23851	25102.7	13709.9
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	HCPSAVVPVELQK	HC(UniMod:4)PSAVVPVELQK	2	HC(UniMod:4)PSAVVPVELQK2	19535.7	15920.3	17786.5
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	HCPSAVVPVELQK	HC(UniMod:4)PSAVVPVELQK	3	HC(UniMod:4)PSAVVPVELQK3	88804.5	139738	116855
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	HCPTALSYAWPYAFTR	HC(UniMod:4)PTALSYAWPYAFTR	3	HC(UniMod:4)PTALSYAWPYAFTR3	38180.9	46020.5	34104
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	HCQDIDECQQGNLCMNGQCK	HC(UniMod:4)QDIDEC(UniMod:4)QQGNLC(UniMod:4)MNGQC(UniMod:4)K	3	HC(UniMod:4)QDIDEC(UniMod:4)QQGNLC(UniMod:4)MNGQC(UniMod:4)K3	36437.8	44358.3	38120.3
A0A8I6AAF1	A0A8I6AAF1	A0A8I6AAF1_RAT	Card19	Caspase recruitment domain family, member 19	1	HCQEFYR	HC(UniMod:4)QEFYR	2	HC(UniMod:4)QEFYR2	18045	12969.4	18323.4
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	HCQLAGK	HC(UniMod:4)QLAGK	2	HC(UniMod:4)QLAGK2			19230
A0A8I6G251	A0A8I6G251	A0A8I6G251_RAT	Tnpo3	Transportin 3	1	HCQLEPDHEGVPEETDDFGEFR	HC(UniMod:4)QLEPDHEGVPEETDDFGEFR	3	HC(UniMod:4)QLEPDHEGVPEETDDFGEFR3	7087.19	4205.13	
A0A8I6G251	A0A8I6G251	A0A8I6G251_RAT	Tnpo3	Transportin 3	1	HCQLEPDHEGVPEETDDFGEFR	HC(UniMod:4)QLEPDHEGVPEETDDFGEFR	4	HC(UniMod:4)QLEPDHEGVPEETDDFGEFR4	30996.9	7376.55	6949.76
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	HCQQEIANVVCLHQAGNLMPK	HC(UniMod:4)QQEIANVVC(UniMod:4)LHQAGNLMPK	3	HC(UniMod:4)QQEIANVVC(UniMod:4)LHQAGNLMPK3	4913.73	17370	17073.9
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	HCQQEIANVVCLHQAGNLMPK	HC(UniMod:4)QQEIANVVC(UniMod:4)LHQAGNLMPK	4	HC(UniMod:4)QQEIANVVC(UniMod:4)LHQAGNLMPK4	51145	79480.6	64586.8
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	HCQQMVWSK	HC(UniMod:4)QQMVWSK	2	HC(UniMod:4)QQMVWSK2	7746.5	6528.73	5383.88
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	HCQQMVWSKPTAK	HC(UniMod:4)QQMVWSKPTAK	3	HC(UniMod:4)QQMVWSKPTAK3	62705	38363.2	57974
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	HCQQMVWSKPTAK	HC(UniMod:4)QQMVWSKPTAK	4	HC(UniMod:4)QQMVWSKPTAK4	31812.4	22884.5	52348.1
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	HCSDIFSK	HC(UniMod:4)SDIFSK	2	HC(UniMod:4)SDIFSK2	10811.5	6734.84	13381.5
G3V6R4	G3V6R4	G3V6R4_RAT	Lrrc1	Leucine rich repeat containing 1	1	HCSLVYVPEEIYR	HC(UniMod:4)SLVYVPEEIYR	3	HC(UniMod:4)SLVYVPEEIYR3	13930.7	13904.2	9510.15
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	HCSQVDSVR	HC(UniMod:4)SQVDSVR	2	HC(UniMod:4)SQVDSVR2	272786		139112
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	HCSSSISTIR	HC(UniMod:4)SSSISTIR	2	HC(UniMod:4)SSSISTIR2	9562.38	2955.25	
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	HCSSSISTIR	HC(UniMod:4)SSSISTIR	3	HC(UniMod:4)SSSISTIR3	8609.3	17973.4	13881.3
B3EY83	B3EY83	LCN12_RAT	Lcn12	Epididymal-specific lipocalin-12	1	HCSTWSYTLIPTNKPGQFTR	HC(UniMod:4)STWSYTLIPTNKPGQFTR	3	HC(UniMod:4)STWSYTLIPTNKPGQFTR3	4215.83	7029.58	3190.35
B3EY83	B3EY83	LCN12_RAT	Lcn12	Epididymal-specific lipocalin-12	1	HCSTWSYTLIPTNKPGQFTR	HC(UniMod:4)STWSYTLIPTNKPGQFTR	4	HC(UniMod:4)STWSYTLIPTNKPGQFTR4	5725.33	15057.2	30481.5
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	HCTFPHLPGK	HC(UniMod:4)TFPHLPGK	3	HC(UniMod:4)TFPHLPGK3	7587.01	3272.51	7276.21
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	HCTNAYMLVYIR	HC(UniMod:4)TNAYMLVYIR	3	HC(UniMod:4)TNAYMLVYIR3	4926.16	3134.29	3803.34
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	HCTSSTLPK	HC(UniMod:4)TSSTLPK	2	HC(UniMod:4)TSSTLPK2	48734.3		63078.5
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	HCTTLGDALR	HC(UniMod:4)TTLGDALR	2	HC(UniMod:4)TTLGDALR2	41563.7	28343.2	25737.2
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	HCTTLGDALR	HC(UniMod:4)TTLGDALR	3	HC(UniMod:4)TTLGDALR3	23267.1	30916	22301.7
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	HCTTLGDALRK	HC(UniMod:4)TTLGDALRK	3	HC(UniMod:4)TTLGDALRK3	27126.6	29523.1	26723
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	HCVFQGDLLLFSCAGAHPTHQR	HC(UniMod:4)VFQGDLLLFSC(UniMod:4)AGAHPTHQR	4	HC(UniMod:4)VFQGDLLLFSC(UniMod:4)AGAHPTHQR4	34174.8	36425.2	30023.1
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	HCVLEWQK	HC(UniMod:4)VLEWQK	2	HC(UniMod:4)VLEWQK2	6391.68	2289.09	3719.49
Q6AYR4	Q6AYR4	TOR2A_RAT	Tor2a	Torsin-2A	1	HCVLNELAQLGLEPR	HC(UniMod:4)VLNELAQLGLEPR	3	HC(UniMod:4)VLNELAQLGLEPR3	9893.22	18046.9	20978.3
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	HCVPEGAPHR	HC(UniMod:4)VPEGAPHR	3	HC(UniMod:4)VPEGAPHR3			50486.2
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	HCVTMDTPAEK	HC(UniMod:4)VTMDTPAEK	2	HC(UniMod:4)VTMDTPAEK2	3436.2	1358.83	3438.17
B0BNN4	B0BNN4	B0BNN4_RAT	Cfp	Complement factor properdin	1	HCYDIHNCVLK	HC(UniMod:4)YDIHNC(UniMod:4)VLK	2	HC(UniMod:4)YDIHNC(UniMod:4)VLK2	2570.29		2376.57
B0BNN4	B0BNN4	B0BNN4_RAT	Cfp	Complement factor properdin	1	HCYDIHNCVLK	HC(UniMod:4)YDIHNC(UniMod:4)VLK	3	HC(UniMod:4)YDIHNC(UniMod:4)VLK3	161225	96552.6	135344
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	HCYGLWFICLPAYVK	HC(UniMod:4)YGLWFIC(UniMod:4)LPAYVK	3	HC(UniMod:4)YGLWFIC(UniMod:4)LPAYVK3	10379.1	6207.64	3923.17
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	HDAATCFVDAGNAFK	HDAATC(UniMod:4)FVDAGNAFK	2	HDAATC(UniMod:4)FVDAGNAFK2	27462.7	17433.2	17279.7
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	HDAATCFVDAGNAFK	HDAATC(UniMod:4)FVDAGNAFK	3	HDAATC(UniMod:4)FVDAGNAFK3	268486	239220	247243
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	HDAATCFVDAGNAFKK	HDAATC(UniMod:4)FVDAGNAFKK	3	HDAATC(UniMod:4)FVDAGNAFKK3	28855.5	25121.9	26958.3
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	HDACQGDSGGVFAVR	HDAC(UniMod:4)QGDSGGVFAVR	2	HDAC(UniMod:4)QGDSGGVFAVR2	85508.8	47387.1	30973.6
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	HDACQGDSGGVFAVR	HDAC(UniMod:4)QGDSGGVFAVR	3	HDAC(UniMod:4)QGDSGGVFAVR3	18141.4	562814	575574
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	HDADGQATLLNLLLR	HDADGQATLLNLLLR	2	HDADGQATLLNLLLR2	17852.2	13602.5	14423.9
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	HDADGQATLLNLLLR	HDADGQATLLNLLLR	3	HDADGQATLLNLLLR3	29752.3	26370.8	24191.8
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	HDAGVSHTAACSPTFSDK	HDAGVSHTAAC(UniMod:4)SPTFSDK	2	HDAGVSHTAAC(UniMod:4)SPTFSDK2	2979.15	6947.87	
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	HDAGVSHTAACSPTFSDK	HDAGVSHTAAC(UniMod:4)SPTFSDK	3	HDAGVSHTAAC(UniMod:4)SPTFSDK3	52717.9	50958.6	57444.7
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	HDAGVSHTAACSPTFSDK	HDAGVSHTAAC(UniMod:4)SPTFSDK	4	HDAGVSHTAAC(UniMod:4)SPTFSDK4	69988.1	83908.4	90988.6
D3ZGW2	D3ZGW2	D3ZGW2_RAT	Ap1g2	AP-1 complex subunit gamma	1	HDAHLLITNSIK	HDAHLLITNSIK	3	HDAHLLITNSIK3	2333.12	7418.48	3084.35
A0A8I6AGL0	A0A8I6AGL0	A0A8I6AGL0_RAT	Ankrd44	Ankyrin repeat domain 44	1	HDAQVNAVDNSGK	HDAQVNAVDNSGK	2	HDAQVNAVDNSGK2	2776.9		
Q29RW1	F7F0L5;P02563;P02564;P12847;A0A8I6AIQ9;Q29RW1	MYH4_RAT	Myh4	Myosin-4	0	HDCDLLR	HDC(UniMod:4)DLLR	2	HDC(UniMod:4)DLLR2	7839.19	6597.45	3722.74
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	HDDPALTLIAGLTSNKPADK	HDDPALTLIAGLTSNKPADK	3	HDDPALTLIAGLTSNKPADK3	9698.26	22329.5	27254.1
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	HDDPALTLIAGLTSNKPADK	HDDPALTLIAGLTSNKPADK	4	HDDPALTLIAGLTSNKPADK4	16887.3	18748.2	15989.8
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	HDDRLNEESGALLQCALLYTSCAGQR	HDDRLNEESGALLQC(UniMod:4)ALLYTSC(UniMod:4)AGQR	4	HDDRLNEESGALLQC(UniMod:4)ALLYTSC(UniMod:4)AGQR4	5887.91	9052.75	4556.07
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	HDDVMAK	HDDVMAK	1	HDDVMAK1			3745.58
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	HDDVMAK	HDDVMAK	2	HDDVMAK2			9187.53
F7EMB2	F7EMB2	F7EMB2_RAT	Rtraf	RNA transcription, translation and transport factor protein	1	HDDYLVMLK	HDDYLVMLK	2	HDDYLVMLK2	7828.28	6585.48	14669
Q02563	Q02563	SV2A_RAT	Sv2a	Synaptic vesicle glycoprotein 2A	1	HDEAWMVLK	HDEAWMVLK	2	HDEAWMVLK2	5346.13	9220.83	8691.32
P01041	P01041	CYTB_RAT	Cstb	Cystatin-B	1	HDELTYF	HDELTYF	2	HDELTYF2	11709.9	20653.5	26264.8
Q63364	Q63364	PJA2_RAT	Pja2	E3 ubiquitin-protein ligase Praja-2	1	HDENDSLQLCAQAVEGGR	HDENDSLQLC(UniMod:4)AQAVEGGR	3	HDENDSLQLC(UniMod:4)AQAVEGGR3	1191.68	2301.62	
F1M7Z1	F1M7Z1	F1M7Z1_RAT	Edc3	Enhancer of mRNA-decapping protein 3	1	HDENILESEPIVYR	HDENILESEPIVYR	3	HDENILESEPIVYR3	5967.03	1257.46	
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	HDESTRELEYR	HDESTRELEYR	3	HDESTRELEYR3		5419.3	5467.95
A0A8I5ZZZ6	A0A8I5ZZZ6	A0A8I5ZZZ6_RAT	Riok3	Serine/threonine-protein kinase RIO3	1	HDEVVCGR	HDEVVC(UniMod:4)GR	2	HDEVVC(UniMod:4)GR2			8538.56
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	HDFCWMCLGDWK	HDFC(UniMod:4)WMC(UniMod:4)LGDWK	3	HDFC(UniMod:4)WMC(UniMod:4)LGDWK3	9742.9	9105	6106.95
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	HDFGFTIK	HDFGFTIK	2	HDFGFTIK2	3269.57	2221.24	1993.37
P18614	P18614	ITA1_RAT	Itga1	Integrin alpha-1	1	HDFQDSVR	HDFQDSVR	2	HDFQDSVR2	2330.95		
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	HDFSTVLTVFPILR	HDFSTVLTVFPILR	2	HDFSTVLTVFPILR2	630.504	2052.13	2747.12
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	HDFSTVLTVFPILR	HDFSTVLTVFPILR	3	HDFSTVLTVFPILR3	15930.3	9719.18	9725.18
P62994	P62994	GRB2_RAT	Grb2	Growth factor receptor-bound protein 2	1	HDGAFLIR	HDGAFLIR	2	HDGAFLIR2	50559.5	50238.5	56784.8
Q9Z1W6	Q9Z1W6	LYRIC_RAT	Mtdh	Protein LYRIC	1	HDGKEVDEGAWETK	HDGKEVDEGAWETK	3	HDGKEVDEGAWETK3	5540.86		7097.66
P58751	P58751	RELN_RAT	Reln	Reelin	1	HDGLDQNDWAIDNVLISGSADQR	HDGLDQNDWAIDNVLISGSADQR	3	HDGLDQNDWAIDNVLISGSADQR3	155424	159995	147049
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	HDGNVIFSPFGLSVAMVNLMLGAK	HDGNVIFSPFGLSVAMVNLMLGAK	3	HDGNVIFSPFGLSVAMVNLMLGAK3	15200.7	20623.9	16061.9
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	HDGNVIFSPFGLSVAMVNLMLGAK	HDGNVIFSPFGLSVAMVNLMLGAK	4	HDGNVIFSPFGLSVAMVNLMLGAK4	952.091	54202.3	72554.7
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	HDGNVIFSPFGLSVAMVNLMLGAKGETK	HDGNVIFSPFGLSVAMVNLMLGAKGETK	3	HDGNVIFSPFGLSVAMVNLMLGAKGETK3		8010.34	9847.7
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	HDGQLLK	HDGQLLK	2	HDGQLLK2	46746.1	47298.2	40972
Q5FVQ9	Q5FVQ9	TBCE_RAT	Tbce	Tubulin-specific chaperone E	1	HDGSHEGTMYFK	HDGSHEGTMYFK	3	HDGSHEGTMYFK3	2578.38		5679.17
D4A3E1	D4A3E1	D4A3E1_RAT	Hnrnpll	Heterogeneous nuclear ribonucleoprotein L-like	1	HDGYGSHGPLLPLPSR	HDGYGSHGPLLPLPSR	3	HDGYGSHGPLLPLPSR3	9680.46	12464.9	
D4A3E1	D4A3E1	D4A3E1_RAT	Hnrnpll	Heterogeneous nuclear ribonucleoprotein L-like	1	HDGYGSHGPLLPLPSR	HDGYGSHGPLLPLPSR	4	HDGYGSHGPLLPLPSR4	16255.9		
Q99PW3	Q99PW3	NEUR1_RAT	Neu1	Sialidase-1	1	HDHDFNPDECQPYELPDGSVIINAR	HDHDFNPDEC(UniMod:4)QPYELPDGSVIINAR	4	HDHDFNPDEC(UniMod:4)QPYELPDGSVIINAR4	3015.15	2377.94	6900.2
A0A8I5Y176	A0A8I5Y176	A0A8I5Y176_RAT	Ranbp9	RAN binding protein 9	1	HDHEMEDCDTEMEVDCSQLR	HDHEMEDC(UniMod:4)DTEMEVDC(UniMod:4)SQLR	4	HDHEMEDC(UniMod:4)DTEMEVDC(UniMod:4)SQLR4	2225.43	3672.89	
P97686	P97686	NRCAM_RAT	Nrcam	Neuronal cell adhesion molecule	1	HDHTLIPTILWLK	HDHTLIPTILWLK	3	HDHTLIPTILWLK3	5135.54	5214.85	2837.38
Q3L7M0	Q3L7M0	GGTA1_RAT	Ggta1	N-acetyllactosaminide alpha-1,3-galactosyltransferase	1	HDIEAQWHDESHLNK	HDIEAQWHDESHLNK	4	HDIEAQWHDESHLNK4	7639.44	6182.96	4666.3
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	HDIIAWVNDIVSLNYTK	HDIIAWVNDIVSLNYTK	3	HDIIAWVNDIVSLNYTK3	111203	118254	106533
P53817	P53817	PLAT3_RAT	Plaat3	Phospholipase A and acyltransferase 3	1	HDKEYTPLPLNK	HDKEYTPLPLNK	3	HDKEYTPLPLNK3	9656.21	5340.64	5298.11
Q9R0K8	Q9R0K8	STC2_RAT	Stc2	Stanniocalcin-2	1	HDLCSAAQENVVVIVEMIHFK	HDLC(UniMod:4)SAAQENVVVIVEMIHFK	3	HDLC(UniMod:4)SAAQENVVVIVEMIHFK3	1959.91	5762.84	3374.78
P62138	D3ZJU8;P62138;P63088;P62142	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	0	HDLDLICR	HDLDLIC(UniMod:4)R	2	HDLDLIC(UniMod:4)R2	386074	352006	332452
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	HDLEGPNK	HDLEGPNK	2	HDLEGPNK2			12878.5
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	HDLETAMHGK	HDLETAMHGK	2	HDLETAMHGK2	12378.7	10749.2	5729.99
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	HDLINQLQHNHALVTLVAENLATYMESMR	HDLINQLQHNHALVTLVAENLATYMESMR	4	HDLINQLQHNHALVTLVAENLATYMESMR4	12116.3	12606	9080.05
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	HDLLVGAPLYMESR	HDLLVGAPLYMESR	2	HDLLVGAPLYMESR2	692773	506230	509276
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	HDLLVGAPLYMESR	HDLLVGAPLYMESR	3	HDLLVGAPLYMESR3	1.16168e+06	1.06412e+06	1.27492e+06
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	HDLNPLIK	HDLNPLIK	2	HDLNPLIK2	25871.4	30709.1	24636.2
D4ACK7	D4ACK7	D4ACK7_RAT	Cnnm3	Metal transporter	1	HDLQPEPADSTR	HDLQPEPADSTR	2	HDLQPEPADSTR2	2949.36	3439.42	
D4ACK7	D4ACK7	D4ACK7_RAT	Cnnm3	Metal transporter	1	HDLQPEPADSTR	HDLQPEPADSTR	3	HDLQPEPADSTR3	5382.64	4771.12	7679.98
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	HDMLAWINESLQLNLTK	HDMLAWINESLQLNLTK	3	HDMLAWINESLQLNLTK3	80711.5	134505	78265.5
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	HDNAEDALNLK	HDNAEDALNLK	3	HDNAEDALNLK3	1741.3	2281.01	2939.62
Q9JHB5	Q9JHB5	TSNAX_RAT	Tsnax	Translin-associated protein X	1	HDNFPHNQR	HDNFPHNQR	2	HDNFPHNQR2			3427.6
Q4AEG6	Q4AEG6	BMP10_RAT	Bmp10	Bone morphogenetic protein 10	1	HDPLLVVFSDDQSGDKEQK	HDPLLVVFSDDQSGDKEQK	3	HDPLLVVFSDDQSGDKEQK3	3827.21	6677.58	
F1LNH3	F1LNH3	F1LNH3_RAT	Col6a2	Collagen type VI alpha 2 chain	1	HDPRDDDLNLR	HDPRDDDLNLR	3	HDPRDDDLNLR3	14617	16628.8	
Q5XIS9	Q5XIS9	KPCD2_RAT	Prkd2	Serine/threonine-protein kinase D2	1	HDPTSANLLQLVR	HDPTSANLLQLVR	3	HDPTSANLLQLVR3	1603.87	4504.67	1631.75
Q6P6Q9	Q6P6Q9	MICU1_RAT	Micu1	Calcium uptake protein 1, mitochondrial	1	HDPVDGR	HDPVDGR	2	HDPVDGR2			32819.9
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	HDQQFQSLKPISGFITGDQAR	HDQQFQSLKPISGFITGDQAR	3	HDQQFQSLKPISGFITGDQAR3	6588.33	14856.3	8371.15
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	HDQQFQSLKPISGFITGDQAR	HDQQFQSLKPISGFITGDQAR	4	HDQQFQSLKPISGFITGDQAR4	16495.5	36057.9	19674.4
Q9JIX3	Q9JIX3	FHIT_RAT	Fhit	Bis(5'-adenosyl)-triphosphatase	1	HDREEEDSPAFWR	HDREEEDSPAFWR	3	HDREEEDSPAFWR3		6687.74	10206.8
Q9JIX3	Q9JIX3	FHIT_RAT	Fhit	Bis(5'-adenosyl)-triphosphatase	1	HDREEEDSPAFWR	HDREEEDSPAFWR	4	HDREEEDSPAFWR4		4981.3	9372.83
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	HDSASILELDGK	HDSASILELDGK	2	HDSASILELDGK2	3841.88	4247.56	7649.71
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	HDSASILELDGK	HDSASILELDGK	3	HDSASILELDGK3	15427.5	13373.2	13209
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	HDSASILELDGKEVSVFTPSQPR	HDSASILELDGKEVSVFTPSQPR	4	HDSASILELDGKEVSVFTPSQPR4	18124.2	16406.4	16552.9
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	HDSCAYDYLEVR	HDSC(UniMod:4)AYDYLEVR	3	HDSC(UniMod:4)AYDYLEVR3	7304.86	12903.1	3732.72
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	HDSEETAAASEGSNVMSTEETNFDR	HDSEETAAASEGSNVMSTEETNFDR	3	HDSEETAAASEGSNVMSTEETNFDR3	3969.48	1797.07	1100.42
Q68EJ0	Q68EJ0	NB5R4_RAT	Cyb5r4	Cytochrome b5 reductase 4	1	HDSFIPK	HDSFIPK	2	HDSFIPK2		8718.98	13273.5
Q9Z272	Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	1	HDSFVPCSEK	HDSFVPC(UniMod:4)SEK	2	HDSFVPC(UniMod:4)SEK2	12682.2	6291.27	12501
A0A8I6A9K9	A0A8I6A9K9	A0A8I6A9K9_RAT	Hypk	Huntingtin interacting protein K	1	HDSGAADLER	HDSGAADLER	2	HDSGAADLER2	26926.2	23469.7	23459.6
P21588	P21588	5NTD_RAT	Nt5e	5'-nucleotidase	1	HDSGDQDISVVSEYISK	HDSGDQDISVVSEYISK	3	HDSGDQDISVVSEYISK3	6060.14	11183.7	6950.04
A0A0G2K2G7	A0A0G2K2G7	A0A0G2K2G7_RAT	Anks1a	Ankyrin repeat and sterile alpha motif domain containing 1A	1	HDSLHDPGTTSR	HDSLHDPGTTSR	3	HDSLHDPGTTSR3			7612.92
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	HDSPEDVK	HDSPEDVK	2	HDSPEDVK2			4775.93
Q66H91	Q66H91	GIT2_RAT	Git2	ARF GTPase-activating protein GIT2	1	HDSYIPCSER	HDSYIPC(UniMod:4)SER	2	HDSYIPC(UniMod:4)SER2	8974.57	6982.24	4171.16
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	HDTSASTQSTPASSR	HDTSASTQSTPASSR	2	HDTSASTQSTPASSR2			13941.3
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	HDTSASTQSTPASSR	HDTSASTQSTPASSR	3	HDTSASTQSTPASSR3			4162.45
D4A2N2	D4A2N2	D4A2N2_RAT	Inpp5b	phosphoinositide 5-phosphatase	1	HDVILWLGDLNYR	HDVILWLGDLNYR	2	HDVILWLGDLNYR2	2203.93	6756.89	3543.37
D4A2N2	D4A2N2	D4A2N2_RAT	Inpp5b	phosphoinositide 5-phosphatase	1	HDVILWLGDLNYR	HDVILWLGDLNYR	3	HDVILWLGDLNYR3	5203.25	3931.46	6514.64
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	HDVITVLEQQENWWFGEVHGGR	HDVITVLEQQENWWFGEVHGGR	3	HDVITVLEQQENWWFGEVHGGR3	5703.55		1335.06
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	HDVITVLEQQENWWFGEVHGGR	HDVITVLEQQENWWFGEVHGGR	4	HDVITVLEQQENWWFGEVHGGR4	3458.3	7069.39	6287.58
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	HDVLFQITQFPTR	HDVLFQITQFPTR	2	HDVLFQITQFPTR2	2347.46	891.766	1780.79
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	HDVLFQITQFPTR	HDVLFQITQFPTR	3	HDVLFQITQFPTR3	13260.9	20309.8	16416.6
A0A8I5ZTN5	A0A8I5ZTN5	A0A8I5ZTN5_RAT	Adsl	Adenylosuccinate lyase	1	HDVMAHVHTFGHCCPK	HDVMAHVHTFGHC(UniMod:4)C(UniMod:4)PK	4	HDVMAHVHTFGHC(UniMod:4)C(UniMod:4)PK4	4659.58	12496.9	6990.17
A0A0G2JVT8	A0A8I6ARY9;A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	0	HDVQTLLLTR	HDVQTLLLTR	2	HDVQTLLLTR2	6145.48	6260.8	4102.44
A0A0G2JVT8	A0A8I6ARY9;A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	0	HDVQTLLLTR	HDVQTLLLTR	3	HDVQTLLLTR3	3017.06		2475.94
B0BN68	B0BN68	B0BN68_RAT	Mrps9	Mitochondrial ribosomal protein S9	1	HDVTCTVSGGGR	HDVTC(UniMod:4)TVSGGGR	2	HDVTC(UniMod:4)TVSGGGR2	999.137		
O54858	O54858	CBPZ_RAT	Cpz	Carboxypeptidase Z	1	HDVTTAPDGDYWR	HDVTTAPDGDYWR	3	HDVTTAPDGDYWR3	3278.92	7477.1	2246.48
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	HDVVFLITK	HDVVFLITK	2	HDVVFLITK2	86082.2	72289.4	108708
D4A4T9	D4A4T9	CHRD1_RAT	Chordc1	Cysteine and histidine-rich domain-containing protein 1	1	HDWHQTGGEVTISVYAK	HDWHQTGGEVTISVYAK	3	HDWHQTGGEVTISVYAK3	1947.67	1031.45	3305.58
D4A4T9	D4A4T9	CHRD1_RAT	Chordc1	Cysteine and histidine-rich domain-containing protein 1	1	HDWHQTGGEVTISVYAK	HDWHQTGGEVTISVYAK	4	HDWHQTGGEVTISVYAK4	3277.68	2096.11	
D3ZL85	D3ZL85	D3ZL85_RAT	Hccs	Holocytochrome c-type synthase	1	HDWIINR	HDWIINR	2	HDWIINR2	8113.1	5601.55	
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	HEAEKPEMSENTETSGK	HEAEKPEMSENTETSGK	2	HEAEKPEMSENTETSGK2			57453.7
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	HEAEKPEMSENTETSGK	HEAEKPEMSENTETSGK	3	HEAEKPEMSENTETSGK3	4897.81		10019.4
Q9Z1P2	Q9QXQ0;Q8R4I6;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	HEAFESDLAAHQDR	HEAFESDLAAHQDR	2	HEAFESDLAAHQDR2	45748.9	55430	39320.5
Q9Z1P2	Q9QXQ0;Q8R4I6;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	HEAFESDLAAHQDR	HEAFESDLAAHQDR	3	HEAFESDLAAHQDR3	219983	272668	254113
Q9Z1P2	Q9QXQ0;Q8R4I6;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	HEAFESDLAAHQDR	HEAFESDLAAHQDR	4	HEAFESDLAAHQDR4	84705.8	119435	100112
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	HEAFETDFTVHK	HEAFETDFTVHK	2	HEAFETDFTVHK2	7394.42	4312.83	4764.43
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	HEAFETDFTVHK	HEAFETDFTVHK	3	HEAFETDFTVHK3	257300	227531	245785
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	HEAFETDFTVHKDR	HEAFETDFTVHKDR	3	HEAFETDFTVHKDR3	17891.4	8985.89	11023.9
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	HEAFETDFTVHKDR	HEAFETDFTVHKDR	4	HEAFETDFTVHKDR4	108632	84872.4	84649
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	HEAFLVDLNAFGNSIK	HEAFLVDLNAFGNSIK	3	HEAFLVDLNAFGNSIK3	5724.73	3649.97	9900.45
P00787	P00787	CATB_RAT	Ctsb	Cathepsin B	1	HEAGDVMGGHAIR	HEAGDVMGGHAIR	3	HEAGDVMGGHAIR3	66507.6	53597.1	65257.8
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	HEAIETDIAAYEER	HEAIETDIAAYEER	2	HEAIETDIAAYEER2	47603.2	55833.9	40235.1
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	HEAIETDIAAYEER	HEAIETDIAAYEER	3	HEAIETDIAAYEER3	724238	915699	910402
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	HEAIETDTAAYEER	HEAIETDTAAYEER	2	HEAIETDTAAYEER2	12522.3	14346.1	7684.62
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	HEAIETDTAAYEER	HEAIETDTAAYEER	3	HEAIETDTAAYEER3	76773.8	61615.8	82624.2
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	HEALENDFAVHK	HEALENDFAVHK	3	HEALENDFAVHK3	19099.9	13123.9	19053.2
O70595	O70595	ABCB6_RAT	Abcb6	ATP-binding cassette sub-family B member 6	1	HEALLSR	HEALLSR	2	HEALLSR2	4040.26	5420.24	
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	HEALLYTWLAEHK	HEALLYTWLAEHK	3	HEALLYTWLAEHK3	3013.03	1344.47	2969.6
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	HEALLYTWLAEHKPLVLCGPPGSGK	HEALLYTWLAEHKPLVLC(UniMod:4)GPPGSGK	3	HEALLYTWLAEHKPLVLC(UniMod:4)GPPGSGK3	7849.74	11932.6	9149.79
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	HEALLYTWLAEHKPLVLCGPPGSGK	HEALLYTWLAEHKPLVLC(UniMod:4)GPPGSGK	4	HEALLYTWLAEHKPLVLC(UniMod:4)GPPGSGK4	142089	161857	123534
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	HEALMSDLSAYGSSIQALR	HEALMSDLSAYGSSIQALR	3	HEALMSDLSAYGSSIQALR3	481563	545103	591070
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	HEALMSDLSAYGSSIQALR	HEALMSDLSAYGSSIQALR	4	HEALMSDLSAYGSSIQALR4		2171.17	4264.3
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	HEALQSSDAALLSETCR	HEALQSSDAALLSETC(UniMod:4)R	3	HEALQSSDAALLSETC(UniMod:4)R3	11601.3	15818	12515.1
Q5BJQ2	Q5BJQ2	MINY1_RAT	Mindy1	Ubiquitin carboxyl-terminal hydrolase MINDY-1	1	HEALSGPEK	HEALSGPEK	2	HEALSGPEK2	26486.1		13005.2
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	HEAMITDLEER	HEAMITDLEER	2	HEAMITDLEER2	5.41058e+06	5.77336e+06	6.00016e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	HEAMITDLEER	HEAMITDLEER	3	HEAMITDLEER3	3.11023e+06	3.79191e+06	4.06305e+06
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	HEANNLQLK	HEANNLQLK	2	HEANNLQLK2	32607.4	28520.3	24082.5
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	HEASDFPCR	HEASDFPC(UniMod:4)R	2	HEASDFPC(UniMod:4)R2	76476.9	52733.1	65804.9
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	HEASELQIK	HEASELQIK	2	HEASELQIK2	21842.9	35202.8	26248.7
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	HEATVPSLGAVLEELQR	HEATVPSLGAVLEELQR	2	HEATVPSLGAVLEELQR2	63505.4	36197.3	29922.8
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	HEATVPSLGAVLEELQR	HEATVPSLGAVLEELQR	3	HEATVPSLGAVLEELQR3	118001	139325	175999
F7FNG5	D3ZK73;F7FNG5	F7FNG5_RAT	Cul4a	Cullin 4A	0	HECGAAFTSK	HEC(UniMod:4)GAAFTSK	2	HEC(UniMod:4)GAAFTSK2		2559.87	
D3ZY46	G3V982;D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	0	HECPFGR	HEC(UniMod:4)PFGR	2	HEC(UniMod:4)PFGR2	11959.3	4417.23	10675.7
Q3KR57	Q3KR57	Q3KR57_RAT	Grap2	GRB2-related adaptor protein 2	1	HEDDVQHFK	HEDDVQHFK	3	HEDDVQHFK3	15623.4	7154.74	15911
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	HEDELLAK	HEDELLAK	1	HEDELLAK1	13931.9	31771.9	20474.2
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	HEDELLAK	HEDELLAK	2	HEDELLAK2	4.81804e+06	19774.3	14299.9
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	HEDFELLCLDGTR	HEDFELLC(UniMod:4)LDGTR	2	HEDFELLC(UniMod:4)LDGTR2	12723.7	16281.9	6342.64
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	HEDFELLCLDGTR	HEDFELLC(UniMod:4)LDGTR	3	HEDFELLC(UniMod:4)LDGTR3	100974	108464	90553.3
A0A8I6ASC6	A0A8I6ASC6	A0A8I6ASC6_RAT	Igdcc4	Immunoglobulin superfamily, DCC subclass, member 4	1	HEDGYAAVWK	HEDGYAAVWK	3	HEDGYAAVWK3	1880.82	3827.53	1494.12
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	HEDHQVSDGALR	HEDHQVSDGALR	2	HEDHQVSDGALR2	1583.21		
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	HEDHQVSDGALR	HEDHQVSDGALR	3	HEDHQVSDGALR3	136591	125218	118355
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	HEDLLAQATGIESLEGVLQMMQTR	HEDLLAQATGIESLEGVLQMMQTR	3	HEDLLAQATGIESLEGVLQMMQTR3		4813.23	1935.95
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	HEDLVEMVLSMEPGAMR	HEDLVEMVLSMEPGAMR	3	HEDLVEMVLSMEPGAMR3	5081.74	2840.94	10293.7
D4A584	D4A584	D4A584_RAT	Fes	Tyrosine-protein kinase	1	HEDLVLGEQIGR	HEDLVLGEQIGR	3	HEDLVLGEQIGR3	1366.75	5001.42	5499.61
A0A0U1RRU5	A0A0U1RRU5	A0A0U1RRU5_RAT	Tab1	TGF-beta activated kinase 1/MAP3K7 binding protein 1	1	HEDMTLLVR	HEDMTLLVR	2	HEDMTLLVR2	12485.4	13428.5	6602.8
P36576	P36576	ARRC_RAT	Arr3	Arrestin-C (Fragment)	1	HEDTNLASSTILR	HEDTNLASSTILR	2	HEDTNLASSTILR2	3074.13		2815.46
P36576	P36576	ARRC_RAT	Arr3	Arrestin-C (Fragment)	1	HEDTNLASSTILR	HEDTNLASSTILR	3	HEDTNLASSTILR3	67644.1	57067.8	64003
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	HEDTNLASSTIVK	HEDTNLASSTIVK	2	HEDTNLASSTIVK2	5957.76	5349.68	7269.94
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	HEDTNLASSTIVK	HEDTNLASSTIVK	3	HEDTNLASSTIVK3	106442	93343.3	87967.1
P29066	P29066	ARRB1_RAT	Arrb1	Beta-arrestin-1	1	HEDTNLASSTLLR	HEDTNLASSTLLR	3	HEDTNLASSTLLR3		36609.8	
F1M6V8	F1M6V8	F1M6V8_RAT	Strn4	Striatin 4	1	HEEAIHAVACHPSK	HEEAIHAVAC(UniMod:4)HPSK	3	HEEAIHAVAC(UniMod:4)HPSK3	5747.9		5280.8
F1M6V8	F1M6V8	F1M6V8_RAT	Strn4	Striatin 4	1	HEEAIHAVACHPSK	HEEAIHAVAC(UniMod:4)HPSK	4	HEEAIHAVAC(UniMod:4)HPSK4	11365		9595.75
P47875	P47875	CSRP1_RAT	Csrp1	Cysteine and glycine-rich protein 1	1	HEEAPGHRPTTNPNASK	HEEAPGHRPTTNPNASK	2	HEEAPGHRPTTNPNASK2			6217.84
P47875	P47875	CSRP1_RAT	Csrp1	Cysteine and glycine-rich protein 1	1	HEEAPGHRPTTNPNASK	HEEAPGHRPTTNPNASK	3	HEEAPGHRPTTNPNASK3			49268.8
P47875	P47875	CSRP1_RAT	Csrp1	Cysteine and glycine-rich protein 1	1	HEEAPGHRPTTNPNASK	HEEAPGHRPTTNPNASK	4	HEEAPGHRPTTNPNASK4			106787
D4ABM5	D4ABM5	D4ABM5_RAT	Mrps34	Mitochondrial ribosomal protein S34	1	HEEEAFTAFTGK	HEEEAFTAFTGK	3	HEEEAFTAFTGK3	6446.3		2922.91
P21670	P21670	PSA4_RAT	Psma4	Proteasome subunit alpha type-4	1	HEEEEAK	HEEEEAK	2	HEEEEAK2			4019.19
D3ZHK4	D3ZHK4	D3ZHK4_RAT	Rb1cc1	RB1-inducible coiled-coil 1	1	HEEESNILK	HEEESNILK	2	HEEESNILK2	3139.58	2479.3	
P70569	P70569	MYO5B_RAT	Myo5b	Unconventional myosin-Vb	1	HEEEVEHLK	HEEEVEHLK	3	HEEEVEHLK3	7011.92	3779.75	8159.18
Q5I0D1	Q5I0D1	GLOD4_RAT	Glod4	Glyoxalase domain-containing protein 4	1	HEEFEEGCK	HEEFEEGC(UniMod:4)K	2	HEEFEEGC(UniMod:4)K2	7861.57	3074.31	
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	HEEGHMLNCTCFGQGR	HEEGHMLNC(UniMod:4)TC(UniMod:4)FGQGR	2	HEEGHMLNC(UniMod:4)TC(UniMod:4)FGQGR2	1063.07		
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	HEEGHMLNCTCFGQGR	HEEGHMLNC(UniMod:4)TC(UniMod:4)FGQGR	3	HEEGHMLNC(UniMod:4)TC(UniMod:4)FGQGR3	14640	14890.1	10184.7
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	HEEGHMLNCTCFGQGR	HEEGHMLNC(UniMod:4)TC(UniMod:4)FGQGR	4	HEEGHMLNC(UniMod:4)TC(UniMod:4)FGQGR4	34815.6	43987.7	41240.7
P10818	P10818	CX6A1_RAT	Cox6a1	Cytochrome c oxidase subunit 6A1, mitochondrial	1	HEEHERPEFVAYPHLR	HEEHERPEFVAYPHLR	4	HEEHERPEFVAYPHLR4	72457.1	60971.7	53296.2
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	HEELMLGDPCLK	HEELMLGDPC(UniMod:4)LK	2	HEELMLGDPC(UniMod:4)LK2	26198.9	26324.5	21737.9
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	HEELMLGDPCLK	HEELMLGDPC(UniMod:4)LK	3	HEELMLGDPC(UniMod:4)LK3	99494	80006	87594.6
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	HEEMAQAFEDWNK	HEEMAQAFEDWNK	3	HEEMAQAFEDWNK3	17135	8265.24	11979.4
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	HEFMNDVVSLR	HEFMNDVVSLR	3	HEFMNDVVSLR3	12041.5	6491.41	8723.27
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	HEFPELAPR	HEFPELAPR	2	HEFPELAPR2	137023	142480	115666
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	HEFTYALMPHK	HEFTYALMPHK	3	HEFTYALMPHK3	26563.8	23030.9	32120.4
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	HEGALETLLR	HEGALETLLR	2	HEGALETLLR2	21377.9	17546.1	6873.27
Q4KLN7	Q4KLN7	ARFG3_RAT	Arfgap3	ADP-ribosylation factor GTPase-activating protein 3	1	HEGGPGQGPSVEGLNTPGK	HEGGPGQGPSVEGLNTPGK	3	HEGGPGQGPSVEGLNTPGK3	9253.64	6323.64	9530.74
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	HEGLDAIENAVENLDATSDK	HEGLDAIENAVENLDATSDK	3	HEGLDAIENAVENLDATSDK3	11083.2	11679.5	16850.7
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	HEGLDAIENAVENLDATSDKQR	HEGLDAIENAVENLDATSDKQR	4	HEGLDAIENAVENLDATSDKQR4	3651.67	2222.37	7046.71
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	HEGLDIIENAVDNLDSR	HEGLDIIENAVDNLDSR	3	HEGLDIIENAVDNLDSR3	48724.8	68607.7	69978.4
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	HEGLERDLAALEDKVK	HEGLERDLAALEDKVK	4	HEGLERDLAALEDKVK4	12066.2	13965.2	8064.5
A0A0G2K5L2	A0A0G2K5L2	GHC1_RAT	Slc25a22	Mitochondrial glutamate carrier 1	1	HEGPSAFLK	HEGPSAFLK	2	HEGPSAFLK2	9954.99	9154.8	7722.28
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	HEGPVAPDLYCMCGR	HEGPVAPDLYC(UniMod:4)MC(UniMod:4)GR	2	HEGPVAPDLYC(UniMod:4)MC(UniMod:4)GR2	1000.06		2739.39
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	HEGPVAPDLYCMCGR	HEGPVAPDLYC(UniMod:4)MC(UniMod:4)GR	3	HEGPVAPDLYC(UniMod:4)MC(UniMod:4)GR3	10332.2	12132.2	19715.6
B2RZ97	B2RZ97	B2RZ97_RAT	Kcmf1	E3 ubiquitin-protein ligase KCMF1	1	HEGVSCDACLK	HEGVSC(UniMod:4)DAC(UniMod:4)LK	2	HEGVSC(UniMod:4)DAC(UniMod:4)LK2	8712.84	8680.39	9655.23
B2RZ97	B2RZ97	B2RZ97_RAT	Kcmf1	E3 ubiquitin-protein ligase KCMF1	1	HEGVSCDACLK	HEGVSC(UniMod:4)DAC(UniMod:4)LK	3	HEGVSC(UniMod:4)DAC(UniMod:4)LK3	34092.2	28773.1	43485.5
Q923S8	Q923S8	PANK4_RAT	Pank4	4'-phosphopantetheine phosphatase	1	HEGYLGAIGAFLK	HEGYLGAIGAFLK	3	HEGYLGAIGAFLK3			8283
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	HEHCEELLIQALSGR	HEHC(UniMod:4)EELLIQALSGR	3	HEHC(UniMod:4)EELLIQALSGR3	19438.1	25846.5	17684.6
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	HEHCEELLIQALSGR	HEHC(UniMod:4)EELLIQALSGR	4	HEHC(UniMod:4)EELLIQALSGR4	18221.8	16564	17903.2
Q5FVM4	Q5FVM4	NONO_RAT	Nono	Non-POU domain-containing octamer-binding protein	1	HEHQVMLMR	HEHQVMLMR	3	HEHQVMLMR3	8315.14	3703.16	
Q9Z2X3	Q9Z2X3	PSD10_RAT	Psmd10	26S proteasome non-ATPase regulatory subunit 10	1	HEIAVMLLEGGANPDAK	HEIAVMLLEGGANPDAK	3	HEIAVMLLEGGANPDAK3	5662.21	11184.3	10534.9
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	HEIEAAIVR	HEIEAAIVR	2	HEIEAAIVR2	19924	19918.2	20572
B4F7E8	B4F7E8	NIBA2_RAT	Niban2	Protein Niban 2	1	HEIEGTGPPQAQLLWR	HEIEGTGPPQAQLLWR	3	HEIEGTGPPQAQLLWR3	2495.66	2435.37	3156.32
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	HEIEMTEK	HEIEMTEK	2	HEIEMTEK2	17061.8	18468	16621.2
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	HEIENLR	HEIENLR	2	HEIENLR2	25655.4		11634.2
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	HEIESLYTK	HEIESLYTK	2	HEIESLYTK2	8590.44	10190.2	14063.5
Q6P6Q2	Q6P6Q2	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	1	HEISEMNR	HEISEMNR	2	HEISEMNR2	205276	152499	177139
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	HEISNELK	HEISNELK	2	HEISNELK2	27536.7	27326	24944.4
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	HEKEDGAISTIVLR	HEKEDGAISTIVLR	3	HEKEDGAISTIVLR3	85347.4	107756	79954.6
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	HEKEDGAISTIVLR	HEKEDGAISTIVLR	4	HEKEDGAISTIVLR4	13910.2	27750.6	22861.2
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	HELEMSK	HELEMSK	2	HELEMSK2		23453.5	
A0A8I5ZUI2	A0A8I5ZUI2	A0A8I5ZUI2_RAT	Ano10	Anoctamin	1	HELENLR	HELENLR	2	HELENLR2		30560.6	
Q68FP2	Q68FP2	PON3_RAT	Pon3	Serum paraoxonase/lactonase 3	1	HELFESVNDIVVLGPEQFYATR	HELFESVNDIVVLGPEQFYATR	3	HELFESVNDIVVLGPEQFYATR3	6220.58	13875.7	13437.6
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	HELIEFR	HELIEFR	2	HELIEFR2	436078	388744	459042
D3ZZ81	A0A8I6AK94;D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	0	HELLEEAR	HELLEEAR	2	HELLEEAR2	15231	30590.9	56349.8
D3ZZ81	A0A8I6AK94;D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	0	HELLEEARR	HELLEEARR	3	HELLEEARR3	38168.3	32955.1	18130.7
Q6AYD3	Q6AYD3	PA2G4_RAT	Pa2g4	Proliferation-associated protein 2G4	1	HELLQPFNVLYEK	HELLQPFNVLYEK	2	HELLQPFNVLYEK2	9325.99	7545.41	8880.28
Q6AYD3	Q6AYD3	PA2G4_RAT	Pa2g4	Proliferation-associated protein 2G4	1	HELLQPFNVLYEK	HELLQPFNVLYEK	3	HELLQPFNVLYEK3	18000.2	12576.9	11250.2
Q6P9U8	Q6P9U8	EIF3H_RAT	Eif3h	Eukaryotic translation initiation factor 3 subunit H	1	HELLSLASSNHLGK	HELLSLASSNHLGK	2	HELLSLASSNHLGK2			6123.95
Q6P9U8	Q6P9U8	EIF3H_RAT	Eif3h	Eukaryotic translation initiation factor 3 subunit H	1	HELLSLASSNHLGK	HELLSLASSNHLGK	3	HELLSLASSNHLGK3	200850	165132	176957
P45592	P45592	COF1_RAT	Cfl1	Cofilin-1	1	HELQANCYEEVK	HELQANC(UniMod:4)YEEVK	2	HELQANC(UniMod:4)YEEVK2	11792.8	7851.17	10305.8
P45592	P45592	COF1_RAT	Cfl1	Cofilin-1	1	HELQANCYEEVK	HELQANC(UniMod:4)YEEVK	3	HELQANC(UniMod:4)YEEVK3	40324.3	21660.5	24824.9
P45592	P45592	COF1_RAT	Cfl1	Cofilin-1	1	HELQANCYEEVKDR	HELQANC(UniMod:4)YEEVKDR	2	HELQANC(UniMod:4)YEEVKDR2	15729.2	10613	6346.52
P45592	P45592	COF1_RAT	Cfl1	Cofilin-1	1	HELQANCYEEVKDR	HELQANC(UniMod:4)YEEVKDR	3	HELQANC(UniMod:4)YEEVKDR3	403052	328419	327230
P45592	P45592	COF1_RAT	Cfl1	Cofilin-1	1	HELQANCYEEVKDR	HELQANC(UniMod:4)YEEVKDR	4	HELQANC(UniMod:4)YEEVKDR4	418710	414774	394700
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	HELQLEQMHR	HELQLEQMHR	3	HELQLEQMHR3	55827.1	63888.3	47877.3
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	HELQVEMK	HELQVEMK	2	HELQVEMK2	73046.9	70084.5	59719.6
Q5BK57	Q5BK57	HAUS8_RAT	Haus8	HAUS augmin-like complex subunit 8	1	HELSMQAVHMEGSGQELLDDLEPALR	HELSMQAVHMEGSGQELLDDLEPALR	4	HELSMQAVHMEGSGQELLDDLEPALR4	15872.6	12508.2	8062.6
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	HELSPALR	HELSPALR	2	HELSPALR2	273950	186089	257824
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	HEMLPANLIQAQR	HEMLPANLIQAQR	2	HEMLPANLIQAQR2	24566.6	19351.3	26549.7
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	HEMLPANLIQAQR	HEMLPANLIQAQR	3	HEMLPANLIQAQR3	98351.3	98410	101386
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	HEMLPEFYK	HEMLPEFYK	2	HEMLPEFYK2	229201	245794	213861
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	HEMLPEFYK	HEMLPEFYK	3	HEMLPEFYK3	46808.9	54561.2	54031.6
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	HEMPPHIYAITDTAYR	HEMPPHIYAITDTAYR	2	HEMPPHIYAITDTAYR2	55289.4	40939.3	42262.2
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	HEMPPHIYAITDTAYR	HEMPPHIYAITDTAYR	3	HEMPPHIYAITDTAYR3	462168	387653	365501
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	HEMPPHIYAITDTAYR	HEMPPHIYAITDTAYR	4	HEMPPHIYAITDTAYR4	223723	153534	227871
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	HEMVIYEAASAIIHLPNCTAR	HEMVIYEAASAIIHLPNC(UniMod:4)TAR	3	HEMVIYEAASAIIHLPNC(UniMod:4)TAR3	50765.3	51551.2	44711.4
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	HEMVIYEAASAIIHLPNCTAR	HEMVIYEAASAIIHLPNC(UniMod:4)TAR	4	HEMVIYEAASAIIHLPNC(UniMod:4)TAR4	22273.1	22825.1	16751.6
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	HEMVVYEAASAIVNLPGCSAK	HEMVVYEAASAIVNLPGC(UniMod:4)SAK	3	HEMVVYEAASAIVNLPGC(UniMod:4)SAK3	43931.2	47945	41154.3
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	HENIIGINDIIR	HENIIGINDIIR	2	HENIIGINDIIR2	2564.58	4832.52	3255.82
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	HENIIGINDIIR	HENIIGINDIIR	3	HENIIGINDIIR3	43033.5	37325.3	30268.1
M0R6Q0	M0R6Q0	M0R6Q0_RAT	Casd1	CAS1 domain containing 1	1	HENIPFEDK	HENIPFEDK	2	HENIPFEDK2	5998.87	5540.35	4034.24
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	HENSSIVQAVCALLNSGGGVIK	HENSSIVQAVC(UniMod:4)ALLNSGGGVIK	3	HENSSIVQAVC(UniMod:4)ALLNSGGGVIK3	10164.9	6724.63	6263.5
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	HENVIGLLDVFTPAR	HENVIGLLDVFTPAR	2	HENVIGLLDVFTPAR2	49789.9	72045.5	52264.2
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	HENVIGLLDVFTPAR	HENVIGLLDVFTPAR	3	HENVIGLLDVFTPAR3	431303	651158	543025
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	HENVIGLLDVFTPAR	HENVIGLLDVFTPAR	4	HENVIGLLDVFTPAR4		2827.39	
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	HEPPALMNEMYCLVVTVQSQEK	HEPPALMNEMYC(UniMod:4)LVVTVQSQEK	3	HEPPALMNEMYC(UniMod:4)LVVTVQSQEK3	2784.08	4741.35	10566.3
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	HEPVGVCGQIIPWNFPLLMQAWK	HEPVGVC(UniMod:4)GQIIPWNFPLLMQAWK	3	HEPVGVC(UniMod:4)GQIIPWNFPLLMQAWK3	19265.5	8420.62	30415.3
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	HEQDMVNGIMPIVDK	HEQDMVNGIMPIVDK	2	HEQDMVNGIMPIVDK2	275736	334793	314047
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	HEQDMVNGIMPIVDK	HEQDMVNGIMPIVDK	3	HEQDMVNGIMPIVDK3	1.33995e+06	1.70623e+06	1.68743e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	HEQDMVNGIMPIVDKLIK	HEQDMVNGIMPIVDKLIK	3	HEQDMVNGIMPIVDKLIK3	791.318	3451.14	2403.13
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	HEQDMVNGIMPIVDKLIK	HEQDMVNGIMPIVDKLIK	4	HEQDMVNGIMPIVDKLIK4	1026.36	3881.71	5121.44
Q63524	Q63524	TMED2_RAT	Tmed2	Transmembrane emp24 domain-containing protein 2	1	HEQEYMEVR	HEQEYMEVR	2	HEQEYMEVR2	176664	196637	234821
Q63524	Q63524	TMED2_RAT	Tmed2	Transmembrane emp24 domain-containing protein 2	1	HEQEYMEVR	HEQEYMEVR	3	HEQEYMEVR3	66877.1	80851.5	105077
D3ZLT1	D3ZLT1	D3ZLT1_RAT	Ndufb7	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7	1	HEQHDWDYCEHQDYVK	HEQHDWDYC(UniMod:4)EHQDYVK	4	HEQHDWDYC(UniMod:4)EHQDYVK4	13595.8	11639.9	23899.9
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	HEQILVLDPPSDLK	HEQILVLDPPSDLK	2	HEQILVLDPPSDLK2	106597	97161.4	92382.3
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	HEQILVLDPPSDLK	HEQILVLDPPSDLK	3	HEQILVLDPPSDLK3	550440	462971	510843
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	HEQISDLDR	HEQISDLDR	2	HEQISDLDR2	42465	54738.1	49833.1
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	HEQISDLDRLK	HEQISDLDRLK	3	HEQISDLDRLK3		6520.59	8086.84
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	HEQNIDCGGGYVK	HEQNIDC(UniMod:4)GGGYVK	2	HEQNIDC(UniMod:4)GGGYVK2	599102	630847	653904
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	HEQNIDCGGGYVK	HEQNIDC(UniMod:4)GGGYVK	3	HEQNIDC(UniMod:4)GGGYVK3	5.84601e+06	6.53255e+06	7.02239e+06
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	HESFVSEVQAK	HESFVSEVQAK	2	HESFVSEVQAK2	5333.73	4931.05	3948.33
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	HESFVSEVQAK	HESFVSEVQAK	3	HESFVSEVQAK3	17585.8	16725.1	14369.9
P61980	A0A8I5ZZG4;P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	HESGASIK	HESGASIK	2	HESGASIK2			13504.9
B2RZ37	B2RZ37	REEP5_RAT	Reep5	Receptor expression-enhancing protein 5	1	HESQVDSVVK	HESQVDSVVK	2	HESQVDSVVK2	217020	231034	222245
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	HESTSSYNYR	HESTSSYNYR	2	HESTSSYNYR2	17748	17076.2	24975.4
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	HESTSSYNYR	HESTSSYNYR	3	HESTSSYNYR3	11971.8	6834.61	15427.7
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	HESVEYKPPK	HESVEYKPPK	3	HESVEYKPPK3	89603.5	70330.3	57531.6
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	HETVLELTETGVEAAAASTISVAR	HETVLELTETGVEAAAASTISVAR	3	HETVLELTETGVEAAAASTISVAR3	4.88319e+06	3.91605e+06	4.30469e+06
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	HETVLELTETGVEAAAASTISVAR	HETVLELTETGVEAAAASTISVAR	4	HETVLELTETGVEAAAASTISVAR4	193827	119140	162215
Q5PQX1	Q5PQX1	TOIP1_RAT	Tor1aip1	Torsin-1A-interacting protein 1	1	HEVDQELTDGFR	HEVDQELTDGFR	3	HEVDQELTDGFR3	11424.9	11493.6	11614.2
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	HEVEQQNIREELNK	HEVEQQNIREELNK	3	HEVEQQNIREELNK3	10762.2		
F1LU48	F1LU48	F1LU48_RAT	Ergic1	Endoplasmic reticulum-Golgi intermediate compartment protein	1	HEVGHIDNSMK	HEVGHIDNSMK	3	HEVGHIDNSMK3		24105.7	
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	HEVHLSFSPSQSLPASQTHMR	HEVHLSFSPSQSLPASQTHMR	3	HEVHLSFSPSQSLPASQTHMR3	115115	136121	112047
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	HEVHLSFSPSQSLPASQTHMR	HEVHLSFSPSQSLPASQTHMR	4	HEVHLSFSPSQSLPASQTHMR4	1.37533e+06	1.57057e+06	1.2878e+06
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	HEVILADIASHEPR	HEVILADIASHEPR	3	HEVILADIASHEPR3	22768.1	20782.7	13579.5
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	HEVILADIASHEPR	HEVILADIASHEPR	4	HEVILADIASHEPR4	5822.07	3856.19	15480.9
A0A0G2KAF4	A0A0G2KAF4	A0A0G2KAF4_RAT	Nfxl1	Nuclear transcription factor, X-box binding-like 1	1	HEVSPLPCHAVGPYSCK	HEVSPLPC(UniMod:4)HAVGPYSC(UniMod:4)K	3	HEVSPLPC(UniMod:4)HAVGPYSC(UniMod:4)K3	3014.07	1802.82	3272.5
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	HEVTAVFAADAVAR	HEVTAVFAADAVAR	3	HEVTAVFAADAVAR3	6947.99	7043.33	10629.3
F1M9B2	F1M9B2	F1M9B2_RAT	Igfbp7	Insulin-like growth factor binding protein 7	1	HEVTGWVLVSPLSK	HEVTGWVLVSPLSK	3	HEVTGWVLVSPLSK3	1039.85	1717.45	5353.43
M0R4P9	M0R4P9	M0R4P9_RAT	Ube2h	Ubiquitin-conjugating enzyme E2H	1	HEVTILGGLNEFVVK	HEVTILGGLNEFVVK	2	HEVTILGGLNEFVVK2	6853.62	7742.27	6232.71
M0R4P9	M0R4P9	M0R4P9_RAT	Ube2h	Ubiquitin-conjugating enzyme E2H	1	HEVTILGGLNEFVVK	HEVTILGGLNEFVVK	3	HEVTILGGLNEFVVK3	67775	68106.8	85621.9
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	HEWEAHNK	HEWEAHNK	2	HEWEAHNK2			28522.3
Q5I0P2	A0A0G2JZ02;Q5I0P2;A0A8I6GH26	GCSH_RAT	Gcsh	Glycine cleavage system H protein, mitochondrial	0	HEWVTAK	HEWVTAK	2	HEWVTAK2	34799.2	28789.7	20581.3
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	HEYCIWTDGLNALLGK	HEYC(UniMod:4)IWTDGLNALLGK	3	HEYC(UniMod:4)IWTDGLNALLGK3	4502.92	2496.95	1143.63
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	HEYFMHATDK	HEYFMHATDK	2	HEYFMHATDK2	4167.03	2779.72	
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	HEYFMHATDK	HEYFMHATDK	3	HEYFMHATDK3	63274.4	59681.1	63490.9
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	HEYGSPGILEFFHHQLK	HEYGSPGILEFFHHQLK	3	HEYGSPGILEFFHHQLK3	3591.26	6241.74	4994.9
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	HEYGSPGILEFFHHQLK	HEYGSPGILEFFHHQLK	4	HEYGSPGILEFFHHQLK4	57015.8	63761.5	57837.2
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	HEYGSPGILEFFHHQLKDIVEYAELK	HEYGSPGILEFFHHQLKDIVEYAELK	4	HEYGSPGILEFFHHQLKDIVEYAELK4	5775.65	5633.63	2659.42
Q7M0E3	Q7M0E3	DEST_RAT	Dstn	Destrin	1	HEYQANGPEDLNR	HEYQANGPEDLNR	2	HEYQANGPEDLNR2	38075.6	27719	29772.9
Q7M0E3	Q7M0E3	DEST_RAT	Dstn	Destrin	1	HEYQANGPEDLNR	HEYQANGPEDLNR	3	HEYQANGPEDLNR3	292773	291894	283772
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	HEYWFAVPQER	HEYWFAVPQER	2	HEYWFAVPQER2	24002.5	29127.2	17510.6
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	HEYWFAVPQER	HEYWFAVPQER	3	HEYWFAVPQER3	59763.8	69475.1	56755.3
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	HFAATHSLEFMWR	HFAATHSLEFMWR	3	HFAATHSLEFMWR3	14094	18749.9	14808.8
Q64244	Q64244	CD38_RAT	Cd38	ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1	1	HFADIILGR	HFADIILGR	2	HFADIILGR2	238212	213840	229934
Q9Z244	Q9Z244	GMPR1_RAT	Gmpr	GMP reductase 1	1	HFAENHPECLQHVAVSSGSGQNDLEK	HFAENHPEC(UniMod:4)LQHVAVSSGSGQNDLEK	3	HFAENHPEC(UniMod:4)LQHVAVSSGSGQNDLEK3	10716.1	5424.65	11850.3
Q9Z244	Q9Z244	GMPR1_RAT	Gmpr	GMP reductase 1	1	HFAENHPECLQHVAVSSGSGQNDLEK	HFAENHPEC(UniMod:4)LQHVAVSSGSGQNDLEK	4	HFAENHPEC(UniMod:4)LQHVAVSSGSGQNDLEK4	61152	59726.9	45752.6
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	HFAGAVCYETTQFVEK	HFAGAVC(UniMod:4)YETTQFVEK	3	HFAGAVC(UniMod:4)YETTQFVEK3	13881	6520.35	12110.3
D4ACC1	D4ACC1	D4ACC1_RAT	Dapp1	Dual adaptor of phosphotyrosine and 3-phosphoinositides 1	1	HFANQPLIGSETGTLIVLK	HFANQPLIGSETGTLIVLK	3	HFANQPLIGSETGTLIVLK3	9375.41	7686.16	7942.32
A0A0G2K6C7	A0A0G2K6C7	A0A0G2K6C7_RAT	Trim5	Tripartite motif-containing 5	1	HFARPTENCHAGVLGYPAIQSGK	HFARPTENC(UniMod:4)HAGVLGYPAIQSGK	4	HFARPTENC(UniMod:4)HAGVLGYPAIQSGK4	11303.5	14476.8	15355.6
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	HFCCFDCDNILAGK	HFC(UniMod:4)C(UniMod:4)FDC(UniMod:4)DNILAGK	2	HFC(UniMod:4)C(UniMod:4)FDC(UniMod:4)DNILAGK2	16363.5	7946.39	9612.51
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	HFCCFDCDNILAGK	HFC(UniMod:4)C(UniMod:4)FDC(UniMod:4)DNILAGK	3	HFC(UniMod:4)C(UniMod:4)FDC(UniMod:4)DNILAGK3	32823.3	22718.1	34472.8
P62747	P62747	RHOB_RAT	Rhob	Rho-related GTP-binding protein RhoB	1	HFCPNVPIILVANK	HFC(UniMod:4)PNVPIILVANK	2	HFC(UniMod:4)PNVPIILVANK2	5509.14	1857.55	3635.04
P62747	P62747	RHOB_RAT	Rhob	Rho-related GTP-binding protein RhoB	1	HFCPNVPIILVANK	HFC(UniMod:4)PNVPIILVANK	3	HFC(UniMod:4)PNVPIILVANK3	51129.4	46692.8	55154.6
P62747	P62747	RHOB_RAT	Rhob	Rho-related GTP-binding protein RhoB	1	HFCPNVPIILVANKK	HFC(UniMod:4)PNVPIILVANKK	3	HFC(UniMod:4)PNVPIILVANKK3	10822.7	7482.91	13755
P62747	P62747	RHOB_RAT	Rhob	Rho-related GTP-binding protein RhoB	1	HFCPNVPIILVANKK	HFC(UniMod:4)PNVPIILVANKK	4	HFC(UniMod:4)PNVPIILVANKK4	12491.4	6924.55	7926.07
P61589	P61589;A0A8I6AN62	RHOA_RAT	Rhoa	Transforming protein RhoA	0	HFCPNVPIILVGNK	HFC(UniMod:4)PNVPIILVGNK	2	HFC(UniMod:4)PNVPIILVGNK2	62577.1	50857.6	47977.5
P61589	P61589;A0A8I6AN62	RHOA_RAT	Rhoa	Transforming protein RhoA	0	HFCPNVPIILVGNK	HFC(UniMod:4)PNVPIILVGNK	3	HFC(UniMod:4)PNVPIILVGNK3	726517	699014	731412
P61589	P61589;A0A8I6AN62	RHOA_RAT	Rhoa	Transforming protein RhoA	0	HFCPNVPIILVGNKK	HFC(UniMod:4)PNVPIILVGNKK	2	HFC(UniMod:4)PNVPIILVGNKK2	3319.99	6411.5	4521.38
P61589	P61589;A0A8I6AN62	RHOA_RAT	Rhoa	Transforming protein RhoA	0	HFCPNVPIILVGNKK	HFC(UniMod:4)PNVPIILVGNKK	3	HFC(UniMod:4)PNVPIILVGNKK3	247735	274614	313075
P61589	P61589;A0A8I6AN62	RHOA_RAT	Rhoa	Transforming protein RhoA	0	HFCPNVPIILVGNKK	HFC(UniMod:4)PNVPIILVGNKK	4	HFC(UniMod:4)PNVPIILVGNKK4	82738.9	105033	128738
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	HFCQEILSFASQQEDK	HFC(UniMod:4)QEILSFASQQEDK	3	HFC(UniMod:4)QEILSFASQQEDK3	1083.56	14756.4	4839.51
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	HFDDSEELQLIGMK	HFDDSEELQLIGMK	3	HFDDSEELQLIGMK3	7756.39	5403.01	6392.47
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	HFDETVNR	HFDETVNR	2	HFDETVNR2	286075	260757	288877
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	HFDFVAK	HFDFVAK	2	HFDFVAK2	110626	105072	101157
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	HFDMPHDIVASEDGTVYIGDAHTNTVWK	HFDMPHDIVASEDGTVYIGDAHTNTVWK	4	HFDMPHDIVASEDGTVYIGDAHTNTVWK4	24556.5	30571.4	13226
A0A0G2JZH9	A0A0G2JZH9	A0A0G2JZH9_RAT	Dhx57	DExH-box helicase 57	1	HFDSPYLLYHEK	HFDSPYLLYHEK	3	HFDSPYLLYHEK3	10205.6	6941.02	
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	HFDSQVIIYGK	HFDSQVIIYGK	2	HFDSQVIIYGK2	92290.2	113889	128158
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	HFDSQVIIYGK	HFDSQVIIYGK	3	HFDSQVIIYGK3	53758.8	55872.3	73326.3
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	HFDVAHISISATR	HFDVAHISISATR	3	HFDVAHISISATR3	29541.5	22419.7	20390.5
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	HFDWLYER	HFDWLYER	2	HFDWLYER2	49810.3	49620.5	35136.6
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	HFDWLYER	HFDWLYER	3	HFDWLYER3	15157.5	21569.7	19315.9
B5DFC3	B5DFC3	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	1	HFEALANR	HFEALANR	2	HFEALANR2	29813.7	23530.4	27545.9
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	HFEATDILVSK	HFEATDILVSK	2	HFEATDILVSK2	31660.5	34453.4	27339.7
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	HFEATDILVSK	HFEATDILVSK	3	HFEATDILVSK3	33661.2	28493.3	42537
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	HFEGLIAR	HFEGLIAR	2	HFEGLIAR2	28286.3	19942.1	17385.9
P83883	P83883;F8WFR5;M0R7E5	RL36A_RAT	Rpl36a	Large ribosomal subunit protein eL42	0	HFELGGDKK	HFELGGDKK	2	HFELGGDKK2	5276.99	4487.76	
F1LN92	A0A8I5ZQ14;F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	0	HFEQAIER	HFEQAIER	2	HFEQAIER2	26494.2	19360.4	35016.7
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	HFEQGFR	HFEQGFR	2	HFEQGFR2	45054.3	27018.1	24592.4
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	HFFVEFSTDSSGAAAGMALR	HFFVEFSTDSSGAAAGMALR	3	HFFVEFSTDSSGAAAGMALR3	9902.29	11261.1	11319.2
B2RYB1	A0A8I6AGB3;B2RYB1	B2RYB1_RAT	Txndc11	Thioredoxin domain containing 11	0	HFFYFPVIHLYHR	HFFYFPVIHLYHR	4	HFFYFPVIHLYHR4	7763.02	2598.53	4614.53
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	HFGAGGNQR	HFGAGGNQR	2	HFGAGGNQR2			28540.3
A0A8I6AKL8	A0A8I6AKL8	A0A8I6AKL8_RAT	Xpo5	Exportin 5	1	HFGLQILEHVVK	HFGLQILEHVVK	3	HFGLQILEHVVK3	4387.94	2606.69	
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	HFGMGLR	HFGMGLR	2	HFGMGLR2	59847.1	68778.7	69137.1
Q63692	Q63692	CDC37_RAT	Cdc37	Hsp90 co-chaperone Cdc37	1	HFGMLHR	HFGMLHR	2	HFGMLHR2	16619.6	20239.2	15157.5
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	HFGSVIAQTIR	HFGSVIAQTIR	2	HFGSVIAQTIR2	12358.7	19821.6	10254.9
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	HFGSVIAQTIR	HFGSVIAQTIR	3	HFGSVIAQTIR3	22426.9	33304.4	41450.3
P30349	P30349	LKHA4_RAT	Lta4h	Leukotriene A-4 hydrolase	1	HFHALGGWGELQNTIK	HFHALGGWGELQNTIK	3	HFHALGGWGELQNTIK3	1596.09	1701.04	
A0A8I5ZYD8	A0A8I5ZYD8	A0A8I5ZYD8_RAT	Fhl3	Four and a half LIM domains 3	1	HFHEGCFR	HFHEGC(UniMod:4)FR	2	HFHEGC(UniMod:4)FR2	40149.1	44737.2	35672.4
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	HFHNTLEHLR	HFHNTLEHLR	3	HFHNTLEHLR3	59969.7	63378.8	61901
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	HFHPLFEYFDYESR	HFHPLFEYFDYESR	3	HFHPLFEYFDYESR3	65100.5	52043	33865.8
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	HFHPLFEYFDYESRK	HFHPLFEYFDYESRK	4	HFHPLFEYFDYESRK4	13000.7	8282.98	6650.31
D4ACC1	D4ACC1	D4ACC1_RAT	Dapp1	Dual adaptor of phosphotyrosine and 3-phosphoinositides 1	1	HFHVEYTGYSFK	HFHVEYTGYSFK	3	HFHVEYTGYSFK3	12318.4	22627.6	9035.74
D4A9Z2	D4A9Z2	D4A9Z2_RAT	Top3b	DNA topoisomerase	1	HFIATVSHDCK	HFIATVSHDC(UniMod:4)K	3	HFIATVSHDC(UniMod:4)K3	4137.89		3222.46
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	HFIDENK	HFIDENK	2	HFIDENK2	5603.46	5099.3	2707.23
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	HFIDSELECNDVVLFWR	HFIDSELEC(UniMod:4)NDVVLFWR	3	HFIDSELEC(UniMod:4)NDVVLFWR3	23971.8	25419.4	34938.2
P70583	D4A6V3;P70583	DUT_RAT	Dut	Deoxyuridine 5'-triphosphate nucleotidohydrolase	0	HFIDVGAGVIDEDYR	HFIDVGAGVIDEDYR	3	HFIDVGAGVIDEDYR3	23231.2	5773.36	
P00507	P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	1	HFIEQGINVCLCQSYAK	HFIEQGINVC(UniMod:4)LC(UniMod:4)QSYAK	3	HFIEQGINVC(UniMod:4)LC(UniMod:4)QSYAK3	42990.4	44737	40131.8
Q3T1J9	Q3T1J9;A0A8I5ZK61	MOB1A_RAT	Mob1a	MOB kinase activator 1A	0	HFIFFVQEFNLIDRR	HFIFFVQEFNLIDRR	3	HFIFFVQEFNLIDRR3	8709.22	10762.7	7243.85
B5DEL8	B5DEL8	B5DEL8_RAT	Ndufs5	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5	1	HFIFLSAEQPYK	HFIFLSAEQPYK	2	HFIFLSAEQPYK2	5175.85	9773.32	6982.94
B5DEL8	B5DEL8	B5DEL8_RAT	Ndufs5	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5	1	HFIFLSAEQPYK	HFIFLSAEQPYK	3	HFIFLSAEQPYK3	56332.8	43294.6	49310.4
P37727	P37727	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	1	HFIIEDSYLSENTCSR	HFIIEDSYLSENTC(UniMod:4)SR	3	HFIIEDSYLSENTC(UniMod:4)SR3	17764.7	12111.5	10281.8
P09760	P09760	FER_RAT	Fer	Tyrosine-protein kinase Fer	1	HFIIQFVDNLYR	HFIIQFVDNLYR	3	HFIIQFVDNLYR3			1596.57
D4A584	D4A584	D4A584_RAT	Fes	Tyrosine-protein kinase	1	HFIIQSSDNLYR	HFIIQSSDNLYR	3	HFIIQSSDNLYR3		2229.19	
Q63413	Q63413	DX39B_RAT	Ddx39b	Spliceosome RNA helicase Ddx39b	1	HFILDECDK	HFILDEC(UniMod:4)DK	2	HFILDEC(UniMod:4)DK2	7006.67		2048.23
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	HFIMQVVCEATQCPDTR	HFIMQVVC(UniMod:4)EATQC(UniMod:4)PDTR	3	HFIMQVVC(UniMod:4)EATQC(UniMod:4)PDTR3	185643	221251	212031
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	HFISGDEPK	HFISGDEPK	2	HFISGDEPK2	65986.6	58340.9	43160.3
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	HFISGDEPKEK	HFISGDEPKEK	3	HFISGDEPKEK3	13298.1	13465.8	15036.5
Q68FW9	Q68FW9	CSN3_RAT	Cops3	COP9 signalosome complex subunit 3	1	HFLCYYYYGGMIYTGLK	HFLC(UniMod:4)YYYYGGMIYTGLK	3	HFLC(UniMod:4)YYYYGGMIYTGLK3	1968.86	5183.71	7033.77
D4A264	D4A264	D4A264_RAT	Ptgr3	Zinc binding alcohol dehydrogenase, domain containing 2	1	HFLDFQGSAIPR	HFLDFQGSAIPR	3	HFLDFQGSAIPR3	18479.3	13479.1	13241.4
Q6U6G5	Q6U6G5;D4AA59	ZC3HF_RAT	Zc3h15	Zinc finger CCCH domain-containing protein 15	0	HFLEAIENNK	HFLEAIENNK	2	HFLEAIENNK2	5991.22	4078.42	4275
Q6U6G5	Q6U6G5;D4AA59	ZC3HF_RAT	Zc3h15	Zinc finger CCCH domain-containing protein 15	0	HFLEAIENNK	HFLEAIENNK	3	HFLEAIENNK3	7806.9	8115.78	11468
A0A8I6A502	A0A8I6A502	A0A8I6A502_RAT	Tns3	Tensin 3	1	HFLIECTPK	HFLIEC(UniMod:4)TPK	2	HFLIEC(UniMod:4)TPK2	4726.16	11453.1	
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	HFLIETGPR	HFLIETGPR	2	HFLIETGPR2	24555.2	21759.1	17971.1
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	HFLLDFAQSEPAQNFCGPYSELFK	HFLLDFAQSEPAQNFC(UniMod:4)GPYSELFK	3	HFLLDFAQSEPAQNFC(UniMod:4)GPYSELFK3	7577.1	6113.54	
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	HFLMSDR	HFLMSDR	2	HFLMSDR2	94629.9	85911.3	76864.3
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	HFLPEMLSK	HFLPEMLSK	2	HFLPEMLSK2	95518	107804	114067
P17955	P17955	NUP62_RAT	Nup62	Nuclear pore glycoprotein p62	1	HFLQQATQVNAWDR	HFLQQATQVNAWDR	3	HFLQQATQVNAWDR3		10931.5	3420.56
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	HFLVEDK	HFLVEDK	2	HFLVEDK2	13956.8	6863.61	6723.1
A0A8I6G3S1	A0A8I6G3S1	A0A8I6G3S1_RAT	Mon1b	Vacuolar fusion protein MON1 homolog	1	HFLYKPLDIPEQHR	HFLYKPLDIPEQHR	4	HFLYKPLDIPEQHR4	8775.7	11747.4	9949.04
O55171	O55171;A0A8I6A6H9;D3ZIQ1;O88267;A1A5R4;D3ZSE3	ACOT2_RAT	Acot2	Acyl-coenzyme A thioesterase 2, mitochondrial	0	HFMAPGVR	HFMAPGVR	2	HFMAPGVR2	48382	67989.9	71900.7
D3ZIK0	D3ZIK0	D3ZIK0_RAT	Glce	heparosan-N-sulfate-glucuronate 5-epimerase	1	HFMLGIAPNLAR	HFMLGIAPNLAR	3	HFMLGIAPNLAR3	9821.99	11887.4	12959.9
B5DEY9	B5DEY9	B5DEY9_RAT	Csgalnact1	Hexosyltransferase	1	HFMQNFR	HFMQNFR	2	HFMQNFR2	10413.6	5338.44	7682.54
P12749	M0R6L3;P12749;D4A1Z2	RL26_RAT	Rpl26	Large ribosomal subunit protein uL24	0	HFNAPSHIR	HFNAPSHIR	2	HFNAPSHIR2	21907.8	1220.61	2512.48
D4ADM2	D4ADM2	D4ADM2_RAT	Pan3	PAN2-PAN3 deadenylation complex subunit PAN3	1	HFNDPNSDAYFTK	HFNDPNSDAYFTK	3	HFNDPNSDAYFTK3	7646.2	6624.29	6569.95
Q5FWU3	Q5FWU3	ATG9A_RAT	Atg9a	Autophagy-related protein 9A	1	HFNELEHELQSR	HFNELEHELQSR	3	HFNELEHELQSR3	5134.64	6468.31	5509.93
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	HFNLHVWVPPAFPSK	HFNLHVWVPPAFPSK	3	HFNLHVWVPPAFPSK3	21775.4	33747.1	19419.8
B0BNF8	B0BNF8	B0BNF8_RAT	Htatip2	HIV-1 Tat interactive protein 2	1	HFNLLSSR	HFNLLSSR	2	HFNLLSSR2	4877.8	8295.25	10542
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	HFNYDVCQSCFFSGR	HFNYDVC(UniMod:4)QSC(UniMod:4)FFSGR	2	HFNYDVC(UniMod:4)QSC(UniMod:4)FFSGR2	8836.2	10722.2	6884.32
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	HFNYDVCQSCFFSGR	HFNYDVC(UniMod:4)QSC(UniMod:4)FFSGR	3	HFNYDVC(UniMod:4)QSC(UniMod:4)FFSGR3	82162.2	92949.8	84778.3
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	HFPDPTASSEK	HFPDPTASSEK	2	HFPDPTASSEK2	56226.6	50176.3	53152.5
Q02356	Q02356;P08290	AMPD2_RAT	Ampd2	AMP deaminase 2	0	HFPLDLR	HFPLDLR	2	HFPLDLR2	192892	236772	213509
D3ZTA9	D3ZTA9;D3ZFR1	D3ZTA9_RAT	Hs3st3b1	Sulfotransferase	0	HFPLGQMLFVSGER	HFPLGQMLFVSGER	3	HFPLGQMLFVSGER3	4951.87		
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	HFPNIDK	HFPNIDK	2	HFPNIDK2	21989	21581	16681.5
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	HFPSVNWLISYSK	HFPSVNWLISYSK	3	HFPSVNWLISYSK3	36387.5	41372.4	45294
D4A9Z6	D4A9Z6	D4A9Z6_RAT	Mrps35	Mitochondrial ribosomal protein S35	1	HFPVEIDTADYVSSGPSIR	HFPVEIDTADYVSSGPSIR	3	HFPVEIDTADYVSSGPSIR3	12624.6	10197.6	7004.2
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	HFPVGLFSGSKPT	HFPVGLFSGSKPT	3	HFPVGLFSGSKPT3	28577.2	28412.1	24647.1
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	HFPYAQQQFLK	HFPYAQQQFLK	2	HFPYAQQQFLK2		61365	58986.5
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	HFPYAQQQFLK	HFPYAQQQFLK	3	HFPYAQQQFLK3	58103.5	55850.1	82592.1
Q9JIX3	Q9JIX3	FHIT_RAT	Fhit	Bis(5'-adenosyl)-triphosphatase	1	HFQGTSITFSMQDGPEAGQTVK	HFQGTSITFSMQDGPEAGQTVK	3	HFQGTSITFSMQDGPEAGQTVK3	9703.61	8209.06	10294
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	HFQLEQDKPEEQTAHAFVNVLTR	HFQLEQDKPEEQTAHAFVNVLTR	4	HFQLEQDKPEEQTAHAFVNVLTR4	25466	31239.3	18628.8
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	HFQVDQTK	HFQVDQTK	2	HFQVDQTK2	53213.4	51135.5	63426.3
Q6V0K7	Q6V0K7	OIT3_RAT	Oit3	Oncoprotein-induced transcript 3 protein	1	HFQVPVFK	HFQVPVFK	2	HFQVPVFK2	33612.5	43598	40984.8
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	HFRPELEDR	HFRPELEDR	3	HFRPELEDR3	47085.4	56479.1	66855
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	HFSGLEEAVYR	HFSGLEEAVYR	2	HFSGLEEAVYR2	89898.6	74676	83851.5
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	HFSGLEEAVYR	HFSGLEEAVYR	3	HFSGLEEAVYR3	212156	205152	209283
D4AD75	D4AD75	D4AD75_RAT	Dpy19l1	Dpy-19 like C-mannosyltransferase 1	1	HFSHLSTLER	HFSHLSTLER	3	HFSHLSTLER3	203345	226305	271828
B2GV38	B2GV38	UBL4A_RAT	Ubl4a	Ubiquitin-like protein 4A	1	HFSIGDASR	HFSIGDASR	2	HFSIGDASR2	144458	161594	158559
Q810T5	Q810T5	KAT7_RAT	Kat7	Histone acetyltransferase KAT7	1	HFSISGCPLYHNLSADECK	HFSISGC(UniMod:4)PLYHNLSADEC(UniMod:4)K	4	HFSISGC(UniMod:4)PLYHNLSADEC(UniMod:4)K4	5211.31		
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	HFSLAATR	HFSLAATR	2	HFSLAATR2	618396	693460	696343
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	HFSMGNEVLQNR	HFSMGNEVLQNR	3	HFSMGNEVLQNR3	22794.9	17311.7	18491.7
Q5RKJ1	Q5RKJ1	MAEA_RAT	Maea	E3 ubiquitin-protein transferase MAEA	1	HFSQAEGSQLDEVR	HFSQAEGSQLDEVR	3	HFSQAEGSQLDEVR3	4703.13	6651.78	
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	HFSQSEDTGNEVFGALHEEQPLPR	HFSQSEDTGNEVFGALHEEQPLPR	4	HFSQSEDTGNEVFGALHEEQPLPR4	2050.53	10988.7	7365.57
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	HFSSDAAPQPR	HFSSDAAPQPR	2	HFSSDAAPQPR2	14244.6	16052.7	11112.8
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	HFSSDAAPQPR	HFSSDAAPQPR	3	HFSSDAAPQPR3	82816.6	97105.7	85170.4
P34058	P82995;P34058;A0A8I5ZQP6	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	HFSVEGQLEFR	HFSVEGQLEFR	2	HFSVEGQLEFR2	163971	187322	150942
P34058	P82995;P34058;A0A8I5ZQP6	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	HFSVEGQLEFR	HFSVEGQLEFR	3	HFSVEGQLEFR3	145436	174215	136904
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	HFTDLVAIQNK	HFTDLVAIQNK	2	HFTDLVAIQNK2	85083.3	61035.3	59700.8
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	HFTDLVAIQNK	HFTDLVAIQNK	3	HFTDLVAIQNK3	372184	383523	357231
Q3ZAU6	Q3ZAU6	Q3ZAU6_RAT	Rnf14	RBR-type E3 ubiquitin transferase	1	HFTDPDSPCFNR	HFTDPDSPC(UniMod:4)FNR	2	HFTDPDSPC(UniMod:4)FNR2	10619	13054.7	12023.2
Q3ZAU6	Q3ZAU6	Q3ZAU6_RAT	Rnf14	RBR-type E3 ubiquitin transferase	1	HFTDPDSPCFNR	HFTDPDSPC(UniMod:4)FNR	3	HFTDPDSPC(UniMod:4)FNR3	19788.8	26125.8	18899.9
B1WBT4	A0A0G2KAH6;B1WBT4;Q4KLN3	B1WBT4_RAT	Srpk2	SRSF protein kinase 2	0	HFTEDIQTR	HFTEDIQTR	2	HFTEDIQTR2	38471.8	46123.7	34635.7
B1WBT4	A0A0G2KAH6;B1WBT4;Q4KLN3	B1WBT4_RAT	Srpk2	SRSF protein kinase 2	0	HFTEDIQTR	HFTEDIQTR	3	HFTEDIQTR3	16749.4	10326.9	23583.6
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	HFTEFVPLR	HFTEFVPLR	2	HFTEFVPLR2	48882.1	34563.7	37350.6
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	HFTEFVPLR	HFTEFVPLR	3	HFTEFVPLR3	39790.4	36690.5	28745
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	HFTILDAPGHK	HFTILDAPGHK	2	HFTILDAPGHK2	17436.1	17324.9	13786.8
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	HFTILDAPGHK	HFTILDAPGHK	3	HFTILDAPGHK3	473548	403624	343846
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	HFTNPYCNIYLNSVQVAK	HFTNPYC(UniMod:4)NIYLNSVQVAK	3	HFTNPYC(UniMod:4)NIYLNSVQVAK3	15297.7	10670	13686.8
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	HFTNWTKPTSPTR	HFTNWTKPTSPTR	3	HFTNWTKPTSPTR3	14203.6	16337	12699.7
D3ZUX7	D3ZUX7	D3ZUX7_RAT	Acsf3	Acyl-CoA synthetase family member 3	1	HFTQSHVQDFVR	HFTQSHVQDFVR	3	HFTQSHVQDFVR3	3435.58	1670.99	5927.09
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	HFTVMNYDPDVVLK	HFTVMNYDPDVVLK	2	HFTVMNYDPDVVLK2	884.095	2656.72	
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	HFTVMNYDPDVVLK	HFTVMNYDPDVVLK	3	HFTVMNYDPDVVLK3	15136.8	10867.3	
F7EKI5	F7EKI5	F7EKI5_RAT	Pcdh18	Protocadherin 18	1	HFTVQVNDINDNPPR	HFTVQVNDINDNPPR	2	HFTVQVNDINDNPPR2		2278.1	
F7EKI5	F7EKI5	F7EKI5_RAT	Pcdh18	Protocadherin 18	1	HFTVQVNDINDNPPR	HFTVQVNDINDNPPR	3	HFTVQVNDINDNPPR3	58637.8	55183.7	57192.9
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	HFVALSTNTDK	HFVALSTNTDK	2	HFVALSTNTDK2	61310.8	54062.5	50964.1
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	HFVALSTNTDK	HFVALSTNTDK	3	HFVALSTNTDK3	11063.9	8012.02	12762.8
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	HFVALSTNTDKVK	HFVALSTNTDKVK	3	HFVALSTNTDKVK3	11317.6	19008.3	15634.3
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	HFVEVPEGATWAEVTVCSCSSEVSAK	HFVEVPEGATWAEVTVC(UniMod:4)SC(UniMod:4)SSEVSAK	3	HFVEVPEGATWAEVTVC(UniMod:4)SC(UniMod:4)SSEVSAK3	7360.28	4341.75	9869.39
Q7M0E3	D4A315;Q7M0E3	DEST_RAT	Dstn	Destrin	0	HFVGMLPEK	HFVGMLPEK	2	HFVGMLPEK2	259363	178256	183274
Q7M0E3	D4A315;Q7M0E3	DEST_RAT	Dstn	Destrin	0	HFVGMLPEKDCR	HFVGMLPEKDC(UniMod:4)R	2	HFVGMLPEKDC(UniMod:4)R2	10911.9	8413.34	6291.51
Q7M0E3	D4A315;Q7M0E3	DEST_RAT	Dstn	Destrin	0	HFVGMLPEKDCR	HFVGMLPEKDC(UniMod:4)R	3	HFVGMLPEKDC(UniMod:4)R3	388808	467069	379708
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	HFVIDGR	HFVIDGR	2	HFVIDGR2			9498.92
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	HFVIDGRPVSFSK	HFVIDGRPVSFSK	3	HFVIDGRPVSFSK3	16515.5	13623.6	10224.3
Q04631	Q04631	FNTA_RAT	Fnta	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha	1	HFVISNTTGYSDR	HFVISNTTGYSDR	3	HFVISNTTGYSDR3		5167.83	
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	HFVQVELGNIER	HFVQVELGNIER	2	HFVQVELGNIER2	1280.88		
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	HFVQVELGNIER	HFVQVELGNIER	3	HFVQVELGNIER3	3113.14	6439.74	8958.28
E9PTA5	E9PTA5	E9PTA5_RAT	Pign	GPI ethanolamine phosphate transferase 1	1	HFYEDDGK	HFYEDDGK	2	HFYEDDGK2	15212.3	18719.2	17552.2
B0BMT9	B0BMT9	B0BMT9_RAT	Sqor	Sulfide quinone oxidoreductase	1	HFYQPIWTLVGAGAK	HFYQPIWTLVGAGAK	3	HFYQPIWTLVGAGAK3	3891.01	1211.28	
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	HFYVVIPQIYK	HFYVVIPQIYK	2	HFYVVIPQIYK2	150032	143805	130306
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	HFYVVIPQIYK	HFYVVIPQIYK	3	HFYVVIPQIYK3	531276	530820	533785
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	HFYYAAVPSAR	HFYYAAVPSAR	2	HFYYAAVPSAR2	82478.8	68657.7	62143
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	HFYYAAVPSAR	HFYYAAVPSAR	3	HFYYAAVPSAR3	208093	277551	283453
Q8R553	Q8R553	CSTN3_RAT	Clstn3	Calsyntenin-3	1	HGAALYAR	HGAALYAR	2	HGAALYAR2	9973.87	2239.72	9882.35
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	HGAAPTVAETEVELSVR	HGAAPTVAETEVELSVR	2	HGAAPTVAETEVELSVR2	3170.48		4015.44
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	HGAAPTVAETEVELSVR	HGAAPTVAETEVELSVR	3	HGAAPTVAETEVELSVR3	11025.3	11624.9	11690.7
A0A8J8YFS5	A0A8J8YFS5	A0A8J8YFS5_RAT	Hars1	Histidine--tRNA ligase, cytoplasmic	1	HGAEVIDTPVFELK	HGAEVIDTPVFELK	3	HGAEVIDTPVFELK3	8095.36	6496.73	6081.83
O88370	O88370	PI42C_RAT	Pip4k2c	Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma	1	HGAGAEISTVHPEQYAK	HGAGAEISTVHPEQYAK	3	HGAGAEISTVHPEQYAK3	9883.67	10959.6	5524.87
O88370	O88370	PI42C_RAT	Pip4k2c	Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma	1	HGAGAEISTVHPEQYAK	HGAGAEISTVHPEQYAK	4	HGAGAEISTVHPEQYAK4	3901.99	2421.28	
Q9R0I8	O88377;Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	0	HGAGAEISTVNPEQYSK	HGAGAEISTVNPEQYSK	2	HGAGAEISTVNPEQYSK2	11840.2	9179.18	7236.46
Q9R0I8	O88377;Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	0	HGAGAEISTVNPEQYSK	HGAGAEISTVNPEQYSK	3	HGAGAEISTVNPEQYSK3	285174	315589	352562
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	HGAILACAEVTYALYELAAQSNR	HGAILAC(UniMod:4)AEVTYALYELAAQSNR	3	HGAILAC(UniMod:4)AEVTYALYELAAQSNR3	6097.83	4805.03	5413.27
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	HGANPDLRDEDGK	HGANPDLRDEDGK	3	HGANPDLRDEDGK3	8000.99		8253.26
D3ZSY8	D3ZSY8	D3ZSY8_RAT	Tbc1d10b	TBC1 domain family, member 10b	1	HGASAAPSPPPR	HGASAAPSPPPR	3	HGASAAPSPPPR3			6442.54
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	HGASDDYFIPSQEFLEAER	HGASDDYFIPSQEFLEAER	3	HGASDDYFIPSQEFLEAER3	66198.1	69812.2	81811.1
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	HGASFIITK	HGASFIITK	2	HGASFIITK2	1391.16	5499.52	3485.65
F7FA09	F7FA09	F7FA09_RAT	Pex11b	Peroxisomal biogenesis factor 11 beta	1	HGASPELQK	HGASPELQK	2	HGASPELQK2	12505.9		14075.5
A0A8I6AEZ7	A0A8I6AEZ7	A0A8I6AEZ7_RAT	Crlf3	Cytokine receptor-like factor 3	1	HGAVASRPPVQIEELVEKPGGIVVR	HGAVASRPPVQIEELVEKPGGIVVR	3	HGAVASRPPVQIEELVEKPGGIVVR3		4862.62	
A0A8I6AEZ7	A0A8I6AEZ7	A0A8I6AEZ7_RAT	Crlf3	Cytokine receptor-like factor 3	1	HGAVASRPPVQIEELVEKPGGIVVR	HGAVASRPPVQIEELVEKPGGIVVR	4	HGAVASRPPVQIEELVEKPGGIVVR4	131961	150894	149418
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	HGAWGSCAVSR	HGAWGSC(UniMod:4)AVSR	2	HGAWGSC(UniMod:4)AVSR2		9101.11	3674.78
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	HGAWGSCAVSR	HGAWGSC(UniMod:4)AVSR	3	HGAWGSC(UniMod:4)AVSR3	22157.5	18495	14708.6
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	HGAWGSCAVSRPR	HGAWGSC(UniMod:4)AVSRPR	3	HGAWGSC(UniMod:4)AVSRPR3	16247.8	25686.8	
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	HGCDATCWGPGPSGCLQTLLHR	HGC(UniMod:4)DATC(UniMod:4)WGPGPSGC(UniMod:4)LQTLLHR	3	HGC(UniMod:4)DATC(UniMod:4)WGPGPSGC(UniMod:4)LQTLLHR3	13943.5	28862.3	16382.3
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	HGCDATCWGPGPSGCLQTLLHR	HGC(UniMod:4)DATC(UniMod:4)WGPGPSGC(UniMod:4)LQTLLHR	4	HGC(UniMod:4)DATC(UniMod:4)WGPGPSGC(UniMod:4)LQTLLHR4	85210.8	87229.6	107161
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	HGCDICR	HGC(UniMod:4)DIC(UniMod:4)R	2	HGC(UniMod:4)DIC(UniMod:4)R2			58125.6
Q9Z2M4	Q9Z2M4	DECR2_RAT	Decr2	Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]	1	HGCHTVIVSR	HGC(UniMod:4)HTVIVSR	3	HGC(UniMod:4)HTVIVSR3		6211.54	
Q66H62	A0A8I6A0L1;Q66H62	CYLD_RAT	Cyld	Ubiquitin carboxyl-terminal hydrolase CYLD	0	HGCIPCQK	HGC(UniMod:4)IPC(UniMod:4)QK	2	HGC(UniMod:4)IPC(UniMod:4)QK2			5176.23
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	HGDAASEAPSK	HGDAASEAPSK	2	HGDAASEAPSK2			42962
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	HGDAASEAPSKDTVEK	HGDAASEAPSKDTVEK	2	HGDAASEAPSKDTVEK2	2677.85		3093.53
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	HGDAASEAPSKDTVEK	HGDAASEAPSKDTVEK	3	HGDAASEAPSKDTVEK3			270413
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	HGDAASEAPSKDTVEK	HGDAASEAPSKDTVEK	4	HGDAASEAPSKDTVEK4			24405.1
P55146	P55146	TYRO3_RAT	Tyro3	Tyrosine-protein kinase receptor TYRO3	1	HGDLHAFLLASR	HGDLHAFLLASR	3	HGDLHAFLLASR3	6608.79	5906.27	6533.7
Q9ES54	Q9ES54	NPL4_RAT	Nploc4	Nuclear protein localization protein 4 homolog	1	HGDLLFLFPSSLAGPSSEMETSTSVGLK	HGDLLFLFPSSLAGPSSEMETSTSVGLK	3	HGDLLFLFPSSLAGPSSEMETSTSVGLK3	8703.25		8953.43
Q66H43	Q66H43	BORC6_RAT	Borcs6	BLOC-1-related complex subunit 6	1	HGDLTHFVANNLQLK	HGDLTHFVANNLQLK	3	HGDLTHFVANNLQLK3	7364.98	14001.2	5992.32
A0A8I6A502	A0A8I6A502	A0A8I6A502_RAT	Tns3	Tensin 3	1	HGDNYLVLNLSEK	HGDNYLVLNLSEK	3	HGDNYLVLNLSEK3	6055.62	7338.16	3445.81
D4ADF5	D4ADF5	D4ADF5_RAT	Pdcd5	Programmed cell death 5	1	HGDPGDAAQQEAK	HGDPGDAAQQEAK	2	HGDPGDAAQQEAK2			19922.8
D4ADF5	D4ADF5	D4ADF5_RAT	Pdcd5	Programmed cell death 5	1	HGDPGDAAQQEAK	HGDPGDAAQQEAK	3	HGDPGDAAQQEAK3			7046.65
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	HGDQFNLYAQFVK	HGDQFNLYAQFVK	3	HGDQFNLYAQFVK3	5819.32	5982.19	5447.95
Q5U2Z4	Q5U2Z4	Q5U2Z4_RAT	Nfkb2	Nuclear factor kappa B subunit 2	1	HGDSAVHLALR	HGDSAVHLALR	3	HGDSAVHLALR3	2517.07	5279.03	1269.5
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	HGDSVTVTCK	HGDSVTVTC(UniMod:4)K	2	HGDSVTVTC(UniMod:4)K2	7875.7	10818	4616.78
Q3B7U4	Q3B7U4	CTU2_RAT	Ctu2	Cytoplasmic tRNA 2-thiolation protein 2	1	HGDVVLVRPMR	HGDVVLVRPMR	3	HGDVVLVRPMR3	6180.8	7111.58	8654.65
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	HGDWYEK	HGDWYEK	2	HGDWYEK2	28754.2	33504.9	36385.5
P25113	P25113	PGAM1_RAT	Pgam1	Phosphoglycerate mutase 1	1	HGEAQVK	HGEAQVK	2	HGEAQVK2			2074.67
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	HGECAQTIR	HGEC(UniMod:4)AQTIR	2	HGEC(UniMod:4)AQTIR2			3149.35
D3ZYF5	D3ZYF5	D3ZYF5_RAT	Trim58	Tripartite motif-containing 58	1	HGEDLSHFCEEDQAMVCWVCDTSPEHR	HGEDLSHFC(UniMod:4)EEDQAMVC(UniMod:4)WVC(UniMod:4)DTSPEHR	4	HGEDLSHFC(UniMod:4)EEDQAMVC(UniMod:4)WVC(UniMod:4)DTSPEHR4	5664.35	3695.81	6745.39
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	HGEIDYEAIVK	HGEIDYEAIVK	2	HGEIDYEAIVK2	35046.9	30259	37440.2
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	HGEIDYEAIVK	HGEIDYEAIVK	3	HGEIDYEAIVK3	31194.1	28842.8	41087.1
Q5XHY7	Q5XHY7	STAM2_RAT	Stam2	Signal transducing adapter molecule 2	1	HGEIITVLDDSDANWWEGENHR	HGEIITVLDDSDANWWEGENHR	3	HGEIITVLDDSDANWWEGENHR3	5389.54	2341.88	2966.77
Q5XHY7	Q5XHY7	STAM2_RAT	Stam2	Signal transducing adapter molecule 2	1	HGEIITVLDDSDANWWEGENHR	HGEIITVLDDSDANWWEGENHR	4	HGEIITVLDDSDANWWEGENHR4	2143.72	3043.59	2403.49
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	HGELELDIPGAQTR	HGELELDIPGAQTR	2	HGELELDIPGAQTR2	13958.6	4152.29	11031.4
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	HGELELDIPGAQTR	HGELELDIPGAQTR	3	HGELELDIPGAQTR3	120813	147956	121587
Q3KR92	Q3KR92	TPST1_RAT	Tpst1	Protein-tyrosine sulfotransferase 1	1	HGEPAPYLCNK	HGEPAPYLC(UniMod:4)NK	3	HGEPAPYLC(UniMod:4)NK3	3233.1	3135.94	7541.07
Q3KR92	Q3KR92	TPST1_RAT	Tpst1	Protein-tyrosine sulfotransferase 1	1	HGEPAPYLCNKDPFALK	HGEPAPYLC(UniMod:4)NKDPFALK	3	HGEPAPYLC(UniMod:4)NKDPFALK3	4552.2	4698.33	3738.18
Q3KR92	Q3KR92	TPST1_RAT	Tpst1	Protein-tyrosine sulfotransferase 1	1	HGEPAPYLCNKDPFALK	HGEPAPYLC(UniMod:4)NKDPFALK	4	HGEPAPYLC(UniMod:4)NKDPFALK4	2429.99	3724.15	1233.79
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	HGEQEPSLWEQALSYFAR	HGEQEPSLWEQALSYFAR	3	HGEQEPSLWEQALSYFAR3	1396.95	1998.96	
P25113	P25113	PGAM1_RAT	Pgam1	Phosphoglycerate mutase 1	1	HGESAWNLENR	HGESAWNLENR	2	HGESAWNLENR2	10351.6	3474.2	
P25113	P25113	PGAM1_RAT	Pgam1	Phosphoglycerate mutase 1	1	HGESAWNLENR	HGESAWNLENR	3	HGESAWNLENR3	33011.2	22067.3	34628.7
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	HGESICLSPCNTLAAVTDDFGR	HGESIC(UniMod:4)LSPC(UniMod:4)NTLAAVTDDFGR	3	HGESIC(UniMod:4)LSPC(UniMod:4)NTLAAVTDDFGR3	38562.2	46427.5	33602.1
Q9Z0V5	A0A8I6AAF3;A0A8I5Y2B8;Q63716;A0A0G2K3Z9;Q9Z0V5	PRDX4_RAT	Prdx4	Peroxiredoxin-4	0	HGEVCPAGWK	HGEVC(UniMod:4)PAGWK	2	HGEVC(UniMod:4)PAGWK2	6326.99	3580.51	
Q9Z0V5	A0A8I6AAF3;A0A8I5Y2B8;Q63716;A0A0G2K3Z9;Q9Z0V5	PRDX4_RAT	Prdx4	Peroxiredoxin-4	0	HGEVCPAGWK	HGEVC(UniMod:4)PAGWK	3	HGEVC(UniMod:4)PAGWK3	4612.64	2045.36	4155.42
A0A8I5Y2B8	A0A8I6AAF3;A0A8I5Y2B8;Q63716;A0A0G2K3Z9	A0A8I5Y2B8_RAT	ENSRNOG00000062500	Peroxiredoxin C-terminal domain-containing protein	0	HGEVCPAGWKPGSDTIKPDVNK	HGEVC(UniMod:4)PAGWKPGSDTIKPDVNK	3	HGEVC(UniMod:4)PAGWKPGSDTIKPDVNK3	15175.1	11776.9	7255.55
A0A8I5Y2B8	A0A8I6AAF3;A0A8I5Y2B8;Q63716;A0A0G2K3Z9	A0A8I5Y2B8_RAT	ENSRNOG00000062500	Peroxiredoxin C-terminal domain-containing protein	0	HGEVCPAGWKPGSDTIKPDVNK	HGEVC(UniMod:4)PAGWKPGSDTIKPDVNK	4	HGEVC(UniMod:4)PAGWKPGSDTIKPDVNK4	173887	137791	165961
Q9Z0V5	Q9Z0V5	PRDX4_RAT	Prdx4	Peroxiredoxin-4	1	HGEVCPAGWKPGSETIIPDPAGK	HGEVC(UniMod:4)PAGWKPGSETIIPDPAGK	3	HGEVC(UniMod:4)PAGWKPGSETIIPDPAGK3	45115.8	34589.5	24949
Q9Z0V5	Q9Z0V5	PRDX4_RAT	Prdx4	Peroxiredoxin-4	1	HGEVCPAGWKPGSETIIPDPAGK	HGEVC(UniMod:4)PAGWKPGSETIIPDPAGK	4	HGEVC(UniMod:4)PAGWKPGSETIIPDPAGK4	154101	163173	187745
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	HGFCGIPITDTGR	HGFC(UniMod:4)GIPITDTGR	2	HGFC(UniMod:4)GIPITDTGR2	15740.4	11492.9	7358.55
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	HGFCGIPITDTGR	HGFC(UniMod:4)GIPITDTGR	3	HGFC(UniMod:4)GIPITDTGR3	87359.8	66016	83984.4
Q32KJ6	Q32KJ6	GALNS_RAT	Galns	N-acetylgalactosamine-6-sulfatase	1	HGFDEWFGSPNCHFGPYDNK	HGFDEWFGSPNC(UniMod:4)HFGPYDNK	4	HGFDEWFGSPNC(UniMod:4)HFGPYDNK4	9504.75	9314.15	9190.42
D3ZG75	D3ZG75	D3ZG75_RAT	Als2cl	ALS2 C-terminal like	1	HGFGVLDSAPQAPQPFR	HGFGVLDSAPQAPQPFR	3	HGFGVLDSAPQAPQPFR3	3876.05		5250.85
D4A5K6	D4A5K6	D4A5K6_RAT	Zmpste24	CAAX prenyl protease	1	HGFNHQTLEFFMK	HGFNHQTLEFFMK	3	HGFNHQTLEFFMK3	4008.15	10024.4	15171.5
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	HGFPYQPSALAFDPVQK	HGFPYQPSALAFDPVQK	2	HGFPYQPSALAFDPVQK2	14376.9	10271.6	12319.3
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	HGFPYQPSALAFDPVQK	HGFPYQPSALAFDPVQK	3	HGFPYQPSALAFDPVQK3	70497.9	73905.6	67899.4
Q641X8	Q641X8	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	1	HGFRQEYLDTLYR	HGFRQEYLDTLYR	3	HGFRQEYLDTLYR3		10467.6	6526.62
D3ZRJ7	D3ZRJ7	D3ZRJ7_RAT	Lrrk1	non-specific serine/threonine protein kinase	1	HGGDIIVIGLEK	HGGDIIVIGLEK	3	HGGDIIVIGLEK3	2789.37	2775.48	4995.88
D4A731	D4A731	D4A731_RAT	Ankib1	RBR-type E3 ubiquitin transferase	1	HGGDLFAENENK	HGGDLFAENENK	2	HGGDLFAENENK2	1307.57		
D4A731	D4A731	D4A731_RAT	Ankib1	RBR-type E3 ubiquitin transferase	1	HGGDLFAENENK	HGGDLFAENENK	3	HGGDLFAENENK3	2949.77	8181.4	1563.19
D3ZFQ8	D3ZFQ8	D3ZFQ8_RAT	Cyc1	Cytochrome c-1	1	HGGEDYVFSLLTGYCEPPTGVSLR	HGGEDYVFSLLTGYC(UniMod:4)EPPTGVSLR	3	HGGEDYVFSLLTGYC(UniMod:4)EPPTGVSLR3	79047.6	70484.7	69371.7
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	HGGESVAAVLR	HGGESVAAVLR	2	HGGESVAAVLR2	3702.22	5662.95	5525.34
Q5HZV9	Q5HZV9	PP1R7_RAT	Ppp1r7	Protein phosphatase 1 regulatory subunit 7	1	HGGGIVADLSQQSLK	HGGGIVADLSQQSLK	2	HGGGIVADLSQQSLK2	12430.8	8171.16	3318.88
Q5HZV9	Q5HZV9	PP1R7_RAT	Ppp1r7	Protein phosphatase 1 regulatory subunit 7	1	HGGGIVADLSQQSLK	HGGGIVADLSQQSLK	3	HGGGIVADLSQQSLK3	149733	157735	153108
Q5HZV9	Q5HZV9	PP1R7_RAT	Ppp1r7	Protein phosphatase 1 regulatory subunit 7	1	HGGGIVADLSQQSLKDGVER	HGGGIVADLSQQSLKDGVER	4	HGGGIVADLSQQSLKDGVER4		6505.45	2006.81
M0RBL7	M0RBL7	M0RBL7_RAT	Tcaf2c	Protein FAM115C-like	1	HGGGLLIGGQACNWASQQGSDK	HGGGLLIGGQAC(UniMod:4)NWASQQGSDK	3	HGGGLLIGGQAC(UniMod:4)NWASQQGSDK3	732.222	1274.75	
P20069	P20069	MPPA_RAT	Pmpca	Mitochondrial-processing peptidase subunit alpha	1	HGGICDCQTSR	HGGIC(UniMod:4)DC(UniMod:4)QTSR	3	HGGIC(UniMod:4)DC(UniMod:4)QTSR3			4000.8
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	HGGKPVNAGVGR	HGGKPVNAGVGR	2	HGGKPVNAGVGR2			12557.1
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	HGGKPVNAGVGR	HGGKPVNAGVGR	3	HGGKPVNAGVGR3			165734
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	HGGMEAYVQVDNCPEAPQGQGK	HGGMEAYVQVDNC(UniMod:4)PEAPQGQGK	3	HGGMEAYVQVDNC(UniMod:4)PEAPQGQGK3	124416	133137	141231
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	HGGNYLLFNLSEQRPDITK	HGGNYLLFNLSEQRPDITK	3	HGGNYLLFNLSEQRPDITK3	4357.09	2509.48	7436.58
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	HGGNYLLFNLSEQRPDITK	HGGNYLLFNLSEQRPDITK	4	HGGNYLLFNLSEQRPDITK4	19422.4	18195.1	18596.5
B0BNN4	B0BNN4	B0BNN4_RAT	Cfp	Complement factor properdin	1	HGGPFCAGDATR	HGGPFC(UniMod:4)AGDATR	2	HGGPFC(UniMod:4)AGDATR2	39597.8	30854	9230.14
B0BNN4	B0BNN4	B0BNN4_RAT	Cfp	Complement factor properdin	1	HGGPFCAGDATR	HGGPFC(UniMod:4)AGDATR	3	HGGPFC(UniMod:4)AGDATR3	140871	114066	116063
Q53B90	Q53B90	RAB43_RAT	Rab43	Ras-related protein Rab-43	1	HGGPMFSEK	HGGPMFSEK	2	HGGPMFSEK2	5518.96	4202.19	
Q5RKH6	Q5RKH6	OS9_RAT	Os9	Protein OS-9	1	HGGPNQDLTVLEMNR	HGGPNQDLTVLEMNR	3	HGGPNQDLTVLEMNR3	12482.9		19444.6
Q5FWS5	Q5FWS5	Q5FWS5_RAT	Loxl1	Lysyl oxidase homolog	1	HGGSASSSVSASAFATTYR	HGGSASSSVSASAFATTYR	3	HGGSASSSVSASAFATTYR3	31535.5	28503.9	31868
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	HGGSLGLGLAAMGTAR	HGGSLGLGLAAMGTAR	2	HGGSLGLGLAAMGTAR2	7008.37	3678.51	4291.22
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	HGGSLGLGLAAMGTAR	HGGSLGLGLAAMGTAR	3	HGGSLGLGLAAMGTAR3	40151.2	36412.6	42347.6
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	HGGSPTSLGTWGSWAGPDDDK	HGGSPTSLGTWGSWAGPDDDK	3	HGGSPTSLGTWGSWAGPDDDK3	44346.7	35717.7	36824.9
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	HGGSPTSLGTWGSWAGPDDDKFSAMK	HGGSPTSLGTWGSWAGPDDDKFSAMK	3	HGGSPTSLGTWGSWAGPDDDKFSAMK3	64395.9	69561.9	60193.3
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	HGGSPTSLGTWGSWAGPDDDKFSAMK	HGGSPTSLGTWGSWAGPDDDKFSAMK	4	HGGSPTSLGTWGSWAGPDDDKFSAMK4	187422	209610	169783
A0A8I6G5Q1	A0A8I6G5Q1	A0A8I6G5Q1_RAT	Sema4d	Semaphorin 4D	1	HGGTAELK	HGGTAELK	2	HGGTAELK2			36161
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	HGGTCHNEIGSYR	HGGTC(UniMod:4)HNEIGSYR	3	HGGTC(UniMod:4)HNEIGSYR3	7693.55	16837.8	8453.41
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	HGGTIPVVPTAEFQDR	HGGTIPVVPTAEFQDR	2	HGGTIPVVPTAEFQDR2	50951.6	32518.4	42084.2
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	HGGTIPVVPTAEFQDR	HGGTIPVVPTAEFQDR	3	HGGTIPVVPTAEFQDR3	352664	339042	364184
A0A8J8XIU8	A0A8J8XIU8	A0A8J8XIU8_RAT	Rbm39	RNA binding motif protein 39	1	HGGVIHIYVDK	HGGVIHIYVDK	3	HGGVIHIYVDK3	14472.4	2980.58	
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	HGGYENAVHSGALDD	HGGYENAVHSGALDD	2	HGGYENAVHSGALDD2	42213.6	50927.8	37354.3
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	HGGYENAVHSGALDD	HGGYENAVHSGALDD	3	HGGYENAVHSGALDD3	146023	174787	172295
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	HGGYLNEK	HGGYLNEK	1	HGGYLNEK1	5122.86	3552.16	
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	HGGYLNEK	HGGYLNEK	2	HGGYLNEK2	524404	581005	587856
P07335	P07335	KCRB_RAT	Ckb	Creatine kinase B-type	1	HGGYQPSDEHK	HGGYQPSDEHK	2	HGGYQPSDEHK2			14141
P07335	P07335	KCRB_RAT	Ckb	Creatine kinase B-type	1	HGGYQPSDEHK	HGGYQPSDEHK	3	HGGYQPSDEHK3			3928.43
P17164	P17164	FUCO_RAT	Fuca1	Tissue alpha-L-fucosidase	1	HGGYYNCEDK	HGGYYNC(UniMod:4)EDK	2	HGGYYNC(UniMod:4)EDK2			965.065
O08623	O08623	SQSTM_RAT	Sqstm1	Sequestosome-1	1	HGHFGWPGWEMGPPGNWSPRPPR	HGHFGWPGWEMGPPGNWSPRPPR	4	HGHFGWPGWEMGPPGNWSPRPPR4	30093.7	49404.1	34767.3
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	HGHGIGHGHQKPHGLGHGHQLK	HGHGIGHGHQKPHGLGHGHQLK	3	HGHGIGHGHQKPHGLGHGHQLK3			16721.5
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	HGHGIGHGHQKPHGLGHGHQLK	HGHGIGHGHQKPHGLGHGHQLK	4	HGHGIGHGHQKPHGLGHGHQLK4	1231.78		65838.7
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	HGHISCSTVEMSYNTVCLVTCNEGYR	HGHISC(UniMod:4)STVEMSYNTVC(UniMod:4)LVTC(UniMod:4)NEGYR	4	HGHISC(UniMod:4)STVEMSYNTVC(UniMod:4)LVTC(UniMod:4)NEGYR4	41151.8	42681	31317.9
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	HGHLIAAQMLDVAIR	HGHLIAAQMLDVAIR	3	HGHLIAAQMLDVAIR3	39675.8	28705.5	29253.2
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	HGHLIAAQMLDVAIR	HGHLIAAQMLDVAIR	4	HGHLIAAQMLDVAIR4	12193.7	9024.4	10324.7
F1M784	F1M784	F1M784_RAT	Pik3ap1	Phosphoinositide-3-kinase adaptor protein 1	1	HGHYPNTIAEK	HGHYPNTIAEK	3	HGHYPNTIAEK3	7827.22	5968.66	
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	HGIHDPHVR	HGIHDPHVR	2	HGIHDPHVR2			11589.9
P41498	P41498	PPAC_RAT	Acp1	Low molecular weight phosphotyrosine protein phosphatase	1	HGIHMQHIAR	HGIHMQHIAR	3	HGIHMQHIAR3	2468.04	3244.51	
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	HGIHPSLVADVHQYFYR	HGIHPSLVADVHQYFYR	4	HGIHPSLVADVHQYFYR4	9073.79	7625.34	3213.39
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	HGILFWLGNCLHANAGR	HGILFWLGNC(UniMod:4)LHANAGR	3	HGILFWLGNC(UniMod:4)LHANAGR3	4127.3	2270.52	1459.88
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	HGILFWLGNCLHANAGR	HGILFWLGNC(UniMod:4)LHANAGR	4	HGILFWLGNC(UniMod:4)LHANAGR4	2221.28	4066.89	4261.35
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	HGINCFINR	HGINC(UniMod:4)FINR	2	HGINC(UniMod:4)FINR2	71036.8	59419	62518.4
Q9R1T3	Q9R1T3	CATZ_RAT	Ctsz	Cathepsin Z	1	HGIPDETCNNYQAK	HGIPDETC(UniMod:4)NNYQAK	2	HGIPDETC(UniMod:4)NNYQAK2	33323.3	26147.8	32038.8
Q9R1T3	Q9R1T3	CATZ_RAT	Ctsz	Cathepsin Z	1	HGIPDETCNNYQAK	HGIPDETC(UniMod:4)NNYQAK	3	HGIPDETC(UniMod:4)NNYQAK3	27724.2	25951.9	34956.9
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	HGIPFFVK	HGIPFFVK	1	HGIPFFVK1	2.31379e+06	1.5126e+06	921161
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	HGIPFFVK	HGIPFFVK	2	HGIPFFVK2	1.21174e+06	632285	750035
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	HGIPFFVKIR	HGIPFFVKIR	3	HGIPFFVKIR3	10310.6		2140.57
P14046	Q6IE52;A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	HGIPFFVKVR	HGIPFFVKVR	3	HGIPFFVKVR3	159404	142583	109445
Q4V7C7	A0A8I6GL35;Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	0	HGIVEDWDLMER	HGIVEDWDLMER	2	HGIVEDWDLMER2	43158.4	21204.8	29926.9
Q4V7C7	A0A8I6GL35;Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	0	HGIVEDWDLMER	HGIVEDWDLMER	3	HGIVEDWDLMER3	214800	171479	180083
F7ESI5	F7ESI5;A0A8I6A1C5	F7ESI5_RAT	Cfhr1	Complement factor H-related 1	0	HGIVYDEK	HGIVYDEK	2	HGIVYDEK2	66650.6	79422.2	79002.9
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	HGKPISSSYVK	HGKPISSSYVK	2	HGKPISSSYVK2	5132.05		
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	HGKPISSSYVK	HGKPISSSYVK	3	HGKPISSSYVK3	24761.5	23986.9	
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	HGLADLSEPQLR	HGLADLSEPQLR	3	HGLADLSEPQLR3	12999.9	12346.6	12701.7
A0A0G2JZC4	A0A0G2JZC4	A0A0G2JZC4_RAT	Sema6d	Semaphorin 6D	1	HGLAEAYK	HGLAEAYK	2	HGLAEAYK2	5928.72	5402.82	4857.6
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	HGLANLTAELLQQGANPNLQTEEALPVPK	HGLANLTAELLQQGANPNLQTEEALPVPK	4	HGLANLTAELLQQGANPNLQTEEALPVPK4	7779.91	12832	14125.1
A0A8I6AI88	A0A8I6AI88	A0A8I6AI88_RAT	Chpf2	Hexosyltransferase	1	HGLDQSDEDFKPR	HGLDQSDEDFKPR	3	HGLDQSDEDFKPR3	3770.61		6325.77
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	HGLEISR	HGLEISR	2	HGLEISR2	24738.2	37471.4	26848.1
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	HGLEVIYMIEPIDEYCVQQLK	HGLEVIYMIEPIDEYC(UniMod:4)VQQLK	3	HGLEVIYMIEPIDEYC(UniMod:4)VQQLK3	371083	366903	381717
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	HGLEVIYMIEPIDEYCVQQLK	HGLEVIYMIEPIDEYC(UniMod:4)VQQLK	4	HGLEVIYMIEPIDEYC(UniMod:4)VQQLK4	7771.4	6177.77	14018.9
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	HGLEVIYMIEPIDEYCVQQLKEFEGK	HGLEVIYMIEPIDEYC(UniMod:4)VQQLKEFEGK	4	HGLEVIYMIEPIDEYC(UniMod:4)VQQLKEFEGK4	4056.87	6237.65	4830.73
E9PT66	E9PT66	E9PT66_RAT	Sf3b3	Splicing factor 3b, subunit 3	1	HGLEVSEMAVSELPGNPNAVWTVR	HGLEVSEMAVSELPGNPNAVWTVR	3	HGLEVSEMAVSELPGNPNAVWTVR3	6507.4	4617.93	5050
D3ZUC2	D3ZUC2	D3ZUC2_RAT	Mov10	RNA helicase	1	HGLGYSLLER	HGLGYSLLER	2	HGLGYSLLER2		3671.44	3215.74
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	HGLIPNLLGEGTYAR	HGLIPNLLGEGTYAR	3	HGLIPNLLGEGTYAR3	24081.3	12110.7	11545
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	HGLLESAVLAR	HGLLESAVLAR	2	HGLLESAVLAR2	3401.94	3214.68	5652.64
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	HGLLESAVLAR	HGLLESAVLAR	3	HGLLESAVLAR3	20927.8	18198.3	26680.9
D3ZT64	D3ZT64	D3ZT64_RAT	Atg2a	Autophagy related 2A	1	HGLLGVDK	HGLLGVDK	2	HGLLGVDK2	2593.92	3442.98	3653.58
D3ZCA0	D3ZCA0	D3ZCA0_RAT	Plpbp	Pyridoxal phosphate homeostasis protein	1	HGLLPSETVAVVEHIK	HGLLPSETVAVVEHIK	3	HGLLPSETVAVVEHIK3	6171.73	7984.04	4226.59
Q3KRD8	Q3KRD8	IF6_RAT	Eif6	Eukaryotic translation initiation factor 6	1	HGLLVPNNTTDQELQHIR	HGLLVPNNTTDQELQHIR	3	HGLLVPNNTTDQELQHIR3	59121.3	19319.2	5527.65
Q3KRD8	Q3KRD8	IF6_RAT	Eif6	Eukaryotic translation initiation factor 6	1	HGLLVPNNTTDQELQHIR	HGLLVPNNTTDQELQHIR	4	HGLLVPNNTTDQELQHIR4	71243.9	20997.8	16349.1
D3ZU48	D3ZU48	D3ZU48_RAT	Klhdc4	Kelch domain containing 4	1	HGLLYVYGGMFEAGDR	HGLLYVYGGMFEAGDR	3	HGLLYVYGGMFEAGDR3	3496.19	10706.9	5332.29
A0A8I5ZZK5	A0A8I5ZZK5	A0A8I5ZZK5_RAT	Bank1	B-cell scaffold protein with ankyrin repeats 1	1	HGLPEVSR	HGLPEVSR	2	HGLPEVSR2	5421.9	4974.83	3995.22
F1LUQ0	F1LUQ0	F1LUQ0_RAT	Mcub	Calcium uniporter regulatory subunit MCUb	1	HGLPFVTLTLPSR	HGLPFVTLTLPSR	3	HGLPFVTLTLPSR3	5180.54	4560.49	6899.7
Q6MG48	D3ZZ51;Q6MG48;A0A8I6G6W8	PRC2A_RAT	Prrc2a	Protein PRRC2A	0	HGLQSLGK	HGLQSLGK	2	HGLQSLGK2	13489.5	7516.61	18914.5
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	HGLQTVGIFR	HGLQTVGIFR	2	HGLQTVGIFR2	28198.2	70409.5	50100.7
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	HGLTEELLSR	HGLTEELLSR	2	HGLTEELLSR2	11900.8	13701.2	5048.27
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	HGLTEELLSR	HGLTEELLSR	3	HGLTEELLSR3	4082.68	2804.31	6173.17
B0BNI6	B0BNI6	B0BNI6_RAT	Slc25a35	Solute carrier family 25, member 35	1	HGLVGLWR	HGLVGLWR	2	HGLVGLWR2	8598.69	8580.43	6163.64
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	HGLVTFSTR	HGLVTFSTR	2	HGLVTFSTR2	15804.4	3.36548e+06	3.48041e+06
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	HGMALTSMYQNSNIQIHHYPNGIVTVNCAR	HGMALTSMYQNSNIQIHHYPNGIVTVNC(UniMod:4)AR	4	HGMALTSMYQNSNIQIHHYPNGIVTVNC(UniMod:4)AR4	13184.4	10221.6	9910.57
Q5U2U2	Q5U2U2	CRKL_RAT	Crkl	Crk-like protein	1	HGMFLVR	HGMFLVR	2	HGMFLVR2	8394.21	10280.9	17963.2
P14882	P14882	PCCA_RAT	Pcca	Propionyl-CoA carboxylase alpha chain, mitochondrial	1	HGNALWLNER	HGNALWLNER	3	HGNALWLNER3	7644.41	7377.4	10864.3
D3ZUI1	D3ZUI1	D3ZUI1_RAT	Apip	Methylthioribulose-1-phosphate dehydratase	1	HGNEIYIAPSGVQK	HGNEIYIAPSGVQK	3	HGNEIYIAPSGVQK3	8356.37	7579.91	9502.21
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	HGNIQVGCVDCSMQQGK	HGNIQVGC(UniMod:4)VDC(UniMod:4)SMQQGK	3	HGNIQVGC(UniMod:4)VDC(UniMod:4)SMQQGK3	6950.58	9246.39	11925.3
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	HGNLCLDK	HGNLC(UniMod:4)LDK	2	HGNLC(UniMod:4)LDK2	4688.51	6663.09	8614
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	HGNLDEAVEECVR	HGNLDEAVEEC(UniMod:4)VR	3	HGNLDEAVEEC(UniMod:4)VR3	6932.52	10484.9	1132.16
B5DF86	B5DF86	B5DF86_RAT	Cog8	Conserved oligomeric Golgi complex subunit 8	1	HGNLGHVNISAIQEPLAFILPK	HGNLGHVNISAIQEPLAFILPK	3	HGNLGHVNISAIQEPLAFILPK3	9207.79	7628.75	7422.84
B5DF86	B5DF86	B5DF86_RAT	Cog8	Conserved oligomeric Golgi complex subunit 8	1	HGNLGHVNISAIQEPLAFILPK	HGNLGHVNISAIQEPLAFILPK	4	HGNLGHVNISAIQEPLAFILPK4	31937.7	22977.7	20183
G3V8Z6	G3V8Z6	G3V8Z6_RAT	Krit1	KRIT1, ankyrin repeat containing	1	HGNNTTAQQIMEGMR	HGNNTTAQQIMEGMR	3	HGNNTTAQQIMEGMR3	9026.78	9373.49	4371.73
F1LNH0	F1LNH0	F1LNH0_RAT	Sema3g	Semaphorin 3G	1	HGNPAVQCLGQGQSQDK	HGNPAVQC(UniMod:4)LGQGQSQDK	3	HGNPAVQC(UniMod:4)LGQGQSQDK3	1289.09		2118.96
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	HGNQYIQVNEPWK	HGNQYIQVNEPWK	2	HGNQYIQVNEPWK2	1739.98		
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	HGNQYIQVNEPWK	HGNQYIQVNEPWK	3	HGNQYIQVNEPWK3	11692.2	14069	6756.73
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	HGNSYVLK	HGNSYVLK	2	HGNSYVLK2	137686	126765	137111
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	HGNTSGLVDGMK	HGNTSGLVDGMK	2	HGNTSGLVDGMK2	766.465	4201.92	
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	HGNTSGLVDGMK	HGNTSGLVDGMK	3	HGNTSGLVDGMK3	4273.33	5618.83	6011.89
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	HGNTSGLVDGMKK	HGNTSGLVDGMKK	3	HGNTSGLVDGMKK3	2747.07	5037.05	3968.26
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	HGNVFLTSHQYPFYDCR	HGNVFLTSHQYPFYDC(UniMod:4)R	3	HGNVFLTSHQYPFYDC(UniMod:4)R3	15409.2	9350	14364.7
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	HGNVFLTSHQYPFYDCR	HGNVFLTSHQYPFYDC(UniMod:4)R	4	HGNVFLTSHQYPFYDC(UniMod:4)R4	13489.4	26381.9	29920
D4A482	D4A482	D4A482_RAT	Mfsd2b	Major facilitator superfamily domain containing 2B	1	HGPGVETIFYSSYVFFTK	HGPGVETIFYSSYVFFTK	3	HGPGVETIFYSSYVFFTK3	6454.57	13150.2	12504.1
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	HGPGVSTQDVAVR	HGPGVSTQDVAVR	2	HGPGVSTQDVAVR2	17653.1	16567.9	9431.17
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	HGPGVSTQDVAVR	HGPGVSTQDVAVR	3	HGPGVSTQDVAVR3	166698	162446	142300
A0A8I6A7P1	A0A8I6A7P1	A0A8I6A7P1_RAT	Prdm10	PR domain zinc finger protein 10	1	HGPLHPIPNRPVLTR	HGPLHPIPNRPVLTR	4	HGPLHPIPNRPVLTR4	8205.46		
A0A8I5ZQ72	A0A8I5ZQ72;A0JPN4	A0A8I5ZQ72_RAT	Zc3h12c	Zinc finger CCCH type containing 12C	0	HGPSLDNFLR	HGPSLDNFLR	3	HGPSLDNFLR3	4928.86	3721.14	3180.83
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	HGPSLPQER	HGPSLPQER	2	HGPSLPQER2	124859	117929	130528
A4V8B4	A4V8B4	SAV1_RAT	Sav1	Protein salvador homolog 1	1	HGPTIPR	HGPTIPR	2	HGPTIPR2	59882.1	63917	61860.8
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	HGPTITAK	HGPTITAK	1	HGPTITAK1	26073.8		42282.9
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	HGPTITAK	HGPTITAK	2	HGPTITAK2	880337		821202
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	HGPVSAEGTTDPVPAGQGPGDPGPR	HGPVSAEGTTDPVPAGQGPGDPGPR	3	HGPVSAEGTTDPVPAGQGPGDPGPR3	936640	1.01501e+06	911549
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	HGPVSAEGTTDPVPAGQGPGDPGPR	HGPVSAEGTTDPVPAGQGPGDPGPR	4	HGPVSAEGTTDPVPAGQGPGDPGPR4	8015.28	4399.23	8336.89
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	HGPVYEDDCFGCLSWSHSETHLLYVAEK	HGPVYEDDC(UniMod:4)FGC(UniMod:4)LSWSHSETHLLYVAEK	4	HGPVYEDDC(UniMod:4)FGC(UniMod:4)LSWSHSETHLLYVAEK4	8024.76	20519.7	16183.3
O08774	O08774	RGS12_RAT	Rgs12	Regulator of G-protein signaling 12	1	HGQGSSPGWESVSGR	HGQGSSPGWESVSGR	3	HGQGSSPGWESVSGR3	3013.65	4142.22	3361.3
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	HGQPVLSK	HGQPVLSK	2	HGQPVLSK2	44324.4	42260.1	40022.7
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	HGQTQEYVLKPK	HGQTQEYVLKPK	2	HGQTQEYVLKPK2	3417.84	4617.15	2997.48
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	HGQTQEYVLKPK	HGQTQEYVLKPK	3	HGQTQEYVLKPK3	426012	516529	422408
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	HGQVLILLVEQALNVHDYK	HGQVLILLVEQALNVHDYK	3	HGQVLILLVEQALNVHDYK3		3415.99	2935.9
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	HGQYSLALHLIEAVEAMATL	HGQYSLALHLIEAVEAMATL	3	HGQYSLALHLIEAVEAMATL3		9595.25	13602.2
P62845	P62845	RS15_RAT	Rps15	Small ribosomal subunit protein uS19	1	HGRPGIGATHSSR	HGRPGIGATHSSR	3	HGRPGIGATHSSR3			9606.15
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	HGSFLVR	HGSFLVR	2	HGSFLVR2	167898	164512	153821
Q9Z272	Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	1	HGSGAESDYENTQSGEPLLGLEGK	HGSGAESDYENTQSGEPLLGLEGK	3	HGSGAESDYENTQSGEPLLGLEGK3	2408.73	5430.17	6641.01
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	HGSGESSAPLR	HGSGESSAPLR	2	HGSGESSAPLR2	11915.2		7407.37
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	HGSGESSAPLRVETQPEVQLPGPAPNIR	HGSGESSAPLRVETQPEVQLPGPAPNIR	3	HGSGESSAPLRVETQPEVQLPGPAPNIR3	9777.98	8055.07	
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	HGSGESSAPLRVETQPEVQLPGPAPNIR	HGSGESSAPLRVETQPEVQLPGPAPNIR	4	HGSGESSAPLRVETQPEVQLPGPAPNIR4	76591.1	102274	122559
Q3LRZ1	Q3LRZ1	CRTC2_RAT	Crtc2	CREB-regulated transcription coactivator 2	1	HGSGPNIILTGDSSPGFSK	HGSGPNIILTGDSSPGFSK	3	HGSGPNIILTGDSSPGFSK3	4861.85	4315.6	1286.28
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	HGSIIYHPSLLPR	HGSIIYHPSLLPR	3	HGSIIYHPSLLPR3	21411.3	25276.4	17244.5
P21531	P21531	RL3_RAT	Rpl3	Large ribosomal subunit protein uL3	1	HGSLGFLPR	HGSLGFLPR	2	HGSLGFLPR2	39944.2	14113.8	7848.79
D3ZHQ1	D3ZHQ1	D3ZHQ1_RAT	Dpp8	Dipeptidylpeptidase 8	1	HGSNIWVDEAR	HGSNIWVDEAR	3	HGSNIWVDEAR3	4439.11	4969.01	5267.61
D3ZHQ1	D3ZHQ1	D3ZHQ1_RAT	Dpp8	Dipeptidylpeptidase 8	1	HGSNIWVDEARK	HGSNIWVDEARK	3	HGSNIWVDEARK3	16539.1	21055.3	18900.9
Q5XI22	A0A0G2JUB4;Q5XI22	THIC_RAT	Acat2	Acetyl-CoA acetyltransferase, cytosolic	0	HGSNLEAMSK	HGSNLEAMSK	2	HGSNLEAMSK2	3587.54	4779.86	2317.63
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	HGSSEEEEWLTAER	HGSSEEEEWLTAER	3	HGSSEEEEWLTAER3	56959	60413.3	57605.9
O35397	O35397	CASP6_RAT	Casp6	Caspase-6	1	HGSSLEFTELLTLVNR	HGSSLEFTELLTLVNR	3	HGSSLEFTELLTLVNR3	3135.88	7762.43	7297.54
O35397	O35397	CASP6_RAT	Casp6	Caspase-6	1	HGSSLEFTELLTLVNRK	HGSSLEFTELLTLVNRK	3	HGSSLEFTELLTLVNRK3	4338.85	5063.35	5272.13
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	HGSVALYDIR	HGSVALYDIR	2	HGSVALYDIR2	8411.55	7157.66	3747.53
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	HGSYNVFWSSNPGLPLLTDMVK	HGSYNVFWSSNPGLPLLTDMVK	3	HGSYNVFWSSNPGLPLLTDMVK3	21394.8	20348.8	22003.7
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	HGTALQR	HGTALQR	2	HGTALQR2			26408.1
A0A0G2K9L0;A0A8I5ZMB4	A0A8I5ZMB4;A0A0G2K9L0	A0A0G2K9L0_RAT;A0A8I5ZMB4_RAT	Rnaset2;Rnaset2-ps1	Ribonuclease T2	0	HGTCAAQVDALNSER	HGTC(UniMod:4)AAQVDALNSER	3	HGTC(UniMod:4)AAQVDALNSER3	4091.05	5472.57	6942.16
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	HGTDDGVVWMNWK	HGTDDGVVWMNWK	2	HGTDDGVVWMNWK2	3.81773e+06	3.29023e+06	3.30369e+06
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	HGTDDGVVWMNWK	HGTDDGVVWMNWK	3	HGTDDGVVWMNWK3	1.84131e+07	1.69738e+07	2.07827e+07
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	HGTDDGVVWMNWKGSWYSMR	HGTDDGVVWMNWKGSWYSMR	4	HGTDDGVVWMNWKGSWYSMR4	7962.04	2603.01	7152.31
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	HGTDDGVVWMNWKGSWYSMRR	HGTDDGVVWMNWKGSWYSMRR	4	HGTDDGVVWMNWKGSWYSMRR4	51791.6	41966.9	37823.6
Q5XIS9	Q5XIS9	KPCD2_RAT	Prkd2	Serine/threonine-protein kinase D2	1	HGTPAEGDLGGACLPQDHEMQGLAER	HGTPAEGDLGGAC(UniMod:4)LPQDHEMQGLAER	4	HGTPAEGDLGGAC(UniMod:4)LPQDHEMQGLAER4	2466.45	7627.14	4770.94
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	HGTPPLLIAAGCGNIQMLQLLIK	HGTPPLLIAAGC(UniMod:4)GNIQMLQLLIK	3	HGTPPLLIAAGC(UniMod:4)GNIQMLQLLIK3	1377.04		3363.6
D3ZUC2	D3ZUC2	D3ZUC2_RAT	Mov10	RNA helicase	1	HGVDVEVQGPHEAR	HGVDVEVQGPHEAR	4	HGVDVEVQGPHEAR4	3868.75		
Q63768	Q63768	CRK_RAT	Crk	Adapter molecule crk	1	HGVFLVR	HGVFLVR	2	HGVFLVR2	20667.1	15433.1	12488.1
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	HGVFVGSAMR	HGVFVGSAMR	2	HGVFVGSAMR2	88900.3	75677.2	75833.1
Q498S0	Q498S0	Q498S0_RAT	Chst12	Carbohydrate sulfotransferase	1	HGVIYCYVPK	HGVIYC(UniMod:4)YVPK	2	HGVIYC(UniMod:4)YVPK2	22379.1	19691.1	16389.6
Q498S0	Q498S0	Q498S0_RAT	Chst12	Carbohydrate sulfotransferase	1	HGVIYCYVPK	HGVIYC(UniMod:4)YVPK	3	HGVIYC(UniMod:4)YVPK3	3046.95	2087.23	4187.42
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	HGVPISVTGIAQVK	HGVPISVTGIAQVK	2	HGVPISVTGIAQVK2	16076.6	6879.88	8047.48
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	HGVPISVTGIAQVK	HGVPISVTGIAQVK	3	HGVPISVTGIAQVK3	29536.2	21671.3	29306.8
O88902	O88902	PTN23_RAT	Ptpn23	Tyrosine-protein phosphatase non-receptor type 23 (Fragment)	1	HGVPPPGKPVASMSVSQK	HGVPPPGKPVASMSVSQK	3	HGVPPPGKPVASMSVSQK3	8702.1		
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	HGVPTAQWR	HGVPTAQWR	2	HGVPTAQWR2	11118.9	11356.8	8084.76
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	HGVQECILLVTQR	HGVQEC(UniMod:4)ILLVTQR	3	HGVQEC(UniMod:4)ILLVTQR3	18846.5	20605.2	16209.5
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	HGVQVWAPDSEQPLQELR	HGVQVWAPDSEQPLQELR	3	HGVQVWAPDSEQPLQELR3	29625.5	30463.7	18213.6
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	HGVQVWAPDSEQPLQELRDPTLTFR	HGVQVWAPDSEQPLQELRDPTLTFR	4	HGVQVWAPDSEQPLQELRDPTLTFR4	21508.2	29936.6	37477.4
Q6AXY8	Q6AXY8	Q6AXY8_RAT	Dhrs1	Dehydrogenase/reductase 1	1	HGVSYVSLWPGLVQTEMVK	HGVSYVSLWPGLVQTEMVK	3	HGVSYVSLWPGLVQTEMVK3	6603.35		5543.62
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	HGVTVDATTR	HGVTVDATTR	2	HGVTVDATTR2	8381.05	8737.13	3283.57
P20280	F1LY43;D4A4G9;A0A8I6G7W2;A0A8I6AWN1;P20280;D3ZPN7;A0A8I5ZVN3;M0R5R7;D3ZPV5;D3ZPH0;D4A870;D4A7B4;D3ZPU6;D3Z9G3;D3ZEK2	RL21_RAT	Rpl21	Large ribosomal subunit protein eL21	0	HGVVPLATYMR	HGVVPLATYMR	2	HGVVPLATYMR2	5218.91	6827.96	9039.35
P20280	F1LY43;D4A4G9;A0A8I6G7W2;A0A8I6AWN1;P20280;D3ZPN7;A0A8I5ZVN3;M0R5R7;D3ZPV5;D3ZPH0;D4A870;D4A7B4;D3ZPU6;D3Z9G3;D3ZEK2	RL21_RAT	Rpl21	Large ribosomal subunit protein eL21	0	HGVVPLATYMR	HGVVPLATYMR	3	HGVVPLATYMR3	32468	26723.6	27142.4
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	HGVYNPNK	HGVYNPNK	2	HGVYNPNK2			130479
Q5RK08	Q5RK08	Q5RK08_RAT	Nipsnap2	Glioblastoma amplified sequence	1	HGWEELVYYTVPLIQEMESR	HGWEELVYYTVPLIQEMESR	3	HGWEELVYYTVPLIQEMESR3	15474.4	17037.6	12759.3
Q5XIF3	Q5XIF3	NDUS4_RAT	Ndufs4	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial	1	HGWSYDVEGR	HGWSYDVEGR	2	HGWSYDVEGR2	13713.1	30816.8	37129.4
Q641X7	Q641X7;Q91Z62	FBX25_RAT	Fbxo25	F-box only protein 25	0	HGYCTLGEAFNR	HGYC(UniMod:4)TLGEAFNR	3	HGYC(UniMod:4)TLGEAFNR3	4602.65		9664.44
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	HGYFCFHEAAEQQK	HGYFC(UniMod:4)FHEAAEQQK	3	HGYFC(UniMod:4)FHEAAEQQK3	10832.1	17732.1	9071.24
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	HGYFCFHEAAEQQK	HGYFC(UniMod:4)FHEAAEQQK	4	HGYFC(UniMod:4)FHEAAEQQK4		33134.3	29619
P62246	D3ZLL8;A0A0G2K6I0;A0A0G2K2F6;P62246;A0A0G2JYA6	RS15A_RAT	Rps15a	Small ribosomal subunit protein uS8	0	HGYIGEFEIIDDHR	HGYIGEFEIIDDHR	2	HGYIGEFEIIDDHR2	2650.37	1477.81	
P62246	D3ZLL8;A0A0G2K6I0;A0A0G2K2F6;P62246;A0A0G2JYA6	RS15A_RAT	Rps15a	Small ribosomal subunit protein uS8	0	HGYIGEFEIIDDHR	HGYIGEFEIIDDHR	3	HGYIGEFEIIDDHR3	260800	95000.1	44366.4
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	HGYIPGK	HGYIPGK	1	HGYIPGK1	13580.8	4051.22	
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	HGYIPGK	HGYIPGK	2	HGYIPGK2	533763	536658	392970
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	HGYMGHLTR	HGYMGHLTR	2	HGYMGHLTR2	6141.55	5851.92	7346.97
P29266	P29266	3HIDH_RAT	Hibadh	3-hydroxyisobutyrate dehydrogenase, mitochondrial	1	HGYPLILYDVFPDVCK	HGYPLILYDVFPDVC(UniMod:4)K	3	HGYPLILYDVFPDVC(UniMod:4)K3	18258.5	26688.3	32736.8
A0A8I6ALR3	A0A8I6ALR3	A0A8I6ALR3_RAT	Sh2d1b2	Uncharacterized LOC102556681	1	HGYYIMEAKPSTSK	HGYYIMEAKPSTSK	3	HGYYIMEAKPSTSK3	4012.98	7408.43	4645.58
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	HGYYMTPCILTNCTDDMTCVK	HGYYMTPC(UniMod:4)ILTNC(UniMod:4)TDDMTC(UniMod:4)VK	3	HGYYMTPC(UniMod:4)ILTNC(UniMod:4)TDDMTC(UniMod:4)VK3	12375.8	14347.2	11977.9
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	HHAFCFR	HHAFC(UniMod:4)FR	2	HHAFC(UniMod:4)FR2	14368.4	13425.4	7919.94
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	HHANLCLNGR	HHANLC(UniMod:4)LNGR	3	HHANLC(UniMod:4)LNGR3	7549.96	4849.64	3656.48
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	HHASISELK	HHASISELK	2	HHASISELK2	3273.97	4265.83	4839.68
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	HHASISELKK	HHASISELKK	2	HHASISELKK2	1065.98		1278.44
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	HHASISELKK	HHASISELKK	3	HHASISELKK3			117827
P07895	P07895	SODM_RAT	Sod2	Superoxide dismutase [Mn], mitochondrial	1	HHATYVNNLNVTEEK	HHATYVNNLNVTEEK	2	HHATYVNNLNVTEEK2	54701	25687.9	14856.1
P07895	P07895	SODM_RAT	Sod2	Superoxide dismutase [Mn], mitochondrial	1	HHATYVNNLNVTEEK	HHATYVNNLNVTEEK	3	HHATYVNNLNVTEEK3	57626.3	50240.1	170783
P07895	P07895	SODM_RAT	Sod2	Superoxide dismutase [Mn], mitochondrial	1	HHATYVNNLNVTEEK	HHATYVNNLNVTEEK	4	HHATYVNNLNVTEEK4	97558.8	54034.4	136858
Q6RUV5	Q6RUV5	RAC1_RAT	Rac1	Ras-related C3 botulinum toxin substrate 1	1	HHCPNTPIILVGTK	HHC(UniMod:4)PNTPIILVGTK	2	HHC(UniMod:4)PNTPIILVGTK2	77519.6	76798.6	81639.5
Q6RUV5	Q6RUV5	RAC1_RAT	Rac1	Ras-related C3 botulinum toxin substrate 1	1	HHCPNTPIILVGTK	HHC(UniMod:4)PNTPIILVGTK	3	HHC(UniMod:4)PNTPIILVGTK3	807436	643802	678786
A0A8I6A1P8	A0A8I6A1P8	A0A8I6A1P8_RAT	Rac2	Rac family small GTPase 2	1	HHCPSTPIILVGTK	HHC(UniMod:4)PSTPIILVGTK	3	HHC(UniMod:4)PSTPIILVGTK3	33327.5	41394.1	40270.6
Q5RJR8	Q5RJR8	LRC59_RAT	Lrrc59	Leucine-rich repeat-containing protein 59	1	HHEILQWVLQTDSQQ	HHEILQWVLQTDSQQ	2	HHEILQWVLQTDSQQ2	4282.26	9047.96	1545.38
Q5RJR8	Q5RJR8	LRC59_RAT	Lrrc59	Leucine-rich repeat-containing protein 59	1	HHEILQWVLQTDSQQ	HHEILQWVLQTDSQQ	3	HHEILQWVLQTDSQQ3	18511	23488.5	29312.6
D4AE71	D4AE71	D4AE71_RAT	Cspg4b	Chondroitin sulfate proteoglycan 4B	1	HHETTGQLAGGMR	HHETTGQLAGGMR	3	HHETTGQLAGGMR3	2924.05		4084.29
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	HHFGINKPEK	HHFGINKPEK	2	HHFGINKPEK2	8386.34	9376.81	7506.58
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	HHFGINKPEK	HHFGINKPEK	3	HHFGINKPEK3	33648.2	26784.3	33081.1
A0A8I5YBI7	A0A8I5YBI7	A0A8I5YBI7_RAT	Tmem256	Transmembrane protein 256	1	HHFLHSLALLGVPYCR	HHFLHSLALLGVPYC(UniMod:4)R	3	HHFLHSLALLGVPYC(UniMod:4)R3	14875.8	15656.3	11712.7
A0A8I5YBI7	A0A8I5YBI7	A0A8I5YBI7_RAT	Tmem256	Transmembrane protein 256	1	HHFLHSLALLGVPYCR	HHFLHSLALLGVPYC(UniMod:4)R	4	HHFLHSLALLGVPYC(UniMod:4)R4	45624.8	35327.1	32882.1
Q5HZE4	Q5HZE4	MTNA_RAT	Mri1	Methylthioribose-1-phosphate isomerase	1	HHGIPFYVAAPSSSCDLR	HHGIPFYVAAPSSSC(UniMod:4)DLR	3	HHGIPFYVAAPSSSC(UniMod:4)DLR3	8978.55	7995.3	12012.8
Q5HZE4	Q5HZE4	MTNA_RAT	Mri1	Methylthioribose-1-phosphate isomerase	1	HHGIPFYVAAPSSSCDLR	HHGIPFYVAAPSSSC(UniMod:4)DLR	4	HHGIPFYVAAPSSSC(UniMod:4)DLR4	3067.96		3047.47
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	HHGPQTLYLPVTLSSIPVFQR	HHGPQTLYLPVTLSSIPVFQR	3	HHGPQTLYLPVTLSSIPVFQR3	263920	188917	181494
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	HHGPQTLYLPVTLSSIPVFQR	HHGPQTLYLPVTLSSIPVFQR	4	HHGPQTLYLPVTLSSIPVFQR4	104932	89715.2	124341
D4A746	D4A746	D4A746_RAT	Gmppb	GDP-mannose pyrophosphorylase B	1	HHGQEGSILVTK	HHGQEGSILVTK	3	HHGQEGSILVTK3	18558.3	7172.55	14982.9
P43253	P43253	PI2R_RAT	Ptgir	Prostacyclin receptor	1	HHGSFVPTSR	HHGSFVPTSR	2	HHGSFVPTSR2	41146.3	23685.1	30317.6
Q4KM45	Q4KM45	ADSSP_RAT	Adissp	Adipose-secreted signaling protein	1	HHGTPMLLDGVK	HHGTPMLLDGVK	3	HHGTPMLLDGVK3	37854.4	26111.7	23354.4
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	HHGYILCYK	HHGYILC(UniMod:4)YK	3	HHGYILC(UniMod:4)YK3	130712	164751	150190
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	HHHENFVGYQDDNLFQDEMR	HHHENFVGYQDDNLFQDEMR	4	HHHENFVGYQDDNLFQDEMR4	13041.7	6880.07	7617.61
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	HHHGELLR	HHHGELLR	2	HHHGELLR2			8714.72
P07314	P07314	GGT1_RAT	Ggt1	Glutathione hydrolase 1 proenzyme	1	HHHTEVTPDFIAVVQAVVR	HHHTEVTPDFIAVVQAVVR	4	HHHTEVTPDFIAVVQAVVR4		5933.52	3530.55
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	HHISIAEIYETELVDVEK	HHISIAEIYETELVDVEK	3	HHISIAEIYETELVDVEK3	57365.8	42115.3	53056.4
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	HHISIAEIYETELVDVEK	HHISIAEIYETELVDVEK	4	HHISIAEIYETELVDVEK4	19709.5	24472.9	28098
D3ZKE1	D3ZKE1	D3ZKE1_RAT	Uvrag	UV radiation resistance associated	1	HHISSAIPVPK	HHISSAIPVPK	2	HHISSAIPVPK2	1124.35	2716.87	
D3ZKE1	D3ZKE1	D3ZKE1_RAT	Uvrag	UV radiation resistance associated	1	HHISSAIPVPK	HHISSAIPVPK	3	HHISSAIPVPK3	12454.2	20818	11404.2
P62775	P62775	MTPN_RAT	Mtpn	Myotrophin	1	HHITPLLSAVYEGHVSCVK	HHITPLLSAVYEGHVSC(UniMod:4)VK	3	HHITPLLSAVYEGHVSC(UniMod:4)VK3		12173.3	
P62775	P62775	MTPN_RAT	Mtpn	Myotrophin	1	HHITPLLSAVYEGHVSCVK	HHITPLLSAVYEGHVSC(UniMod:4)VK	4	HHITPLLSAVYEGHVSC(UniMod:4)VK4	89798.6	65461.9	49651.9
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	HHLCEPDMK	HHLC(UniMod:4)EPDMK	2	HHLC(UniMod:4)EPDMK2	1245.29	977.533	2257.12
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	HHLCEPDMK	HHLC(UniMod:4)EPDMK	3	HHLC(UniMod:4)EPDMK3	14141.5	24003	26658.6
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	HHLEAVQNAK	HHLEAVQNAK	2	HHLEAVQNAK2			498657
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	HHLEAVQNAK	HHLEAVQNAK	3	HHLEAVQNAK3			1.55435e+06
D3ZAE6	D3ZAE6	D3ZAE6_RAT	Vasn	Vasorin	1	HHLECLCPEGFIGLYCESPVEQR	HHLEC(UniMod:4)LC(UniMod:4)PEGFIGLYC(UniMod:4)ESPVEQR	4	HHLEC(UniMod:4)LC(UniMod:4)PEGFIGLYC(UniMod:4)ESPVEQR4	2018.84		2041.78
O08770	O08770	GPV_RAT	Gp5	Platelet glycoprotein V	1	HHLELLGR	HHLELLGR	2	HHLELLGR2	12388.4	22762.2	35229.5
O08770	O08770	GPV_RAT	Gp5	Platelet glycoprotein V	1	HHLELLGRDEPPQCNGPESR	HHLELLGRDEPPQC(UniMod:4)NGPESR	4	HHLELLGRDEPPQC(UniMod:4)NGPESR4	115056	103398	122685
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	HHLENAVEGHVQTFTFTQK	HHLENAVEGHVQTFTFTQK	4	HHLENAVEGHVQTFTFTQK4	9718.65	10179.6	14335.8
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	HHLESFGPNTTCYFGCK	HHLESFGPNTTC(UniMod:4)YFGC(UniMod:4)K	3	HHLESFGPNTTC(UniMod:4)YFGC(UniMod:4)K3	15613.3	16035.2	7907.58
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	HHLESFGPNTTCYFGCK	HHLESFGPNTTC(UniMod:4)YFGC(UniMod:4)K	4	HHLESFGPNTTC(UniMod:4)YFGC(UniMod:4)K4	5119.91	5687.23	5701.61
Q499P8	Q499P8	RUSF1_RAT	Rusf1	RUS family member 1	1	HHLEVDEWR	HHLEVDEWR	3	HHLEVDEWR3	18404.5	25832.2	24418.9
P06760	P06760	BGLR_RAT	Gusb	Beta-glucuronidase	1	HHLEVMDELVR	HHLEVMDELVR	3	HHLEVMDELVR3	9810.61	13256.9	8910.07
A0A8I5ZT87	A0A8I5ZT87	A0A8I5ZT87_RAT	Mycbp	Myc binding protein	1	HHLGAATPENPEIELLR	HHLGAATPENPEIELLR	2	HHLGAATPENPEIELLR2	3153.41	2799.39	1866.35
A0A8I5ZT87	A0A8I5ZT87	A0A8I5ZT87_RAT	Mycbp	Myc binding protein	1	HHLGAATPENPEIELLR	HHLGAATPENPEIELLR	3	HHLGAATPENPEIELLR3	96087.7	78760.3	83564.2
A0A8I5ZT87	A0A8I5ZT87	A0A8I5ZT87_RAT	Mycbp	Myc binding protein	1	HHLGAATPENPEIELLR	HHLGAATPENPEIELLR	4	HHLGAATPENPEIELLR4	46343.1	36604	29423.4
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	HHLLFTFYHVSCEINTK	HHLLFTFYHVSC(UniMod:4)EINTK	4	HHLLFTFYHVSC(UniMod:4)EINTK4		2139.86	
A0A8I6GAD6	A0A8I6GAD6	A0A8I6GAD6_RAT	Nrbp1	Nuclear receptor binding protein 1	1	HHLTLLLK	HHLTLLLK	2	HHLTLLLK2	5084.3	2620.8	1963.7
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	HHLTSCHQEQAVNCLLGNVFYER	HHLTSC(UniMod:4)HQEQAVNC(UniMod:4)LLGNVFYER	4	HHLTSC(UniMod:4)HQEQAVNC(UniMod:4)LLGNVFYER4	5946.77		3408.76
F1LW90	F1LW90	F1LW90_RAT	Fam184a	Family with sequence similarity 184, member A	1	HHMAIEAVHSNASR	HHMAIEAVHSNASR	4	HHMAIEAVHSNASR4	8371.32		
A0A8I6G5W4	A0A8I6G5W4	A0A8I6G5W4_RAT	Snrnp70	U1 small nuclear ribonucleoprotein 70 kDa	1	HHNQPYCGIAPYIR	HHNQPYC(UniMod:4)GIAPYIR	3	HHNQPYC(UniMod:4)GIAPYIR3	24746	19476.9	
A0A8I6G5W4	A0A8I6G5W4	A0A8I6G5W4_RAT	Snrnp70	U1 small nuclear ribonucleoprotein 70 kDa	1	HHNQPYCGIAPYIR	HHNQPYC(UniMod:4)GIAPYIR	4	HHNQPYC(UniMod:4)GIAPYIR4	9816.56	6728.06	9221.13
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	HHNQSTAINLNNPESQSMHLETR	HHNQSTAINLNNPESQSMHLETR	3	HHNQSTAINLNNPESQSMHLETR3	4035.97	4302.31	
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	HHNQSTAINLNNPESQSMHLETR	HHNQSTAINLNNPESQSMHLETR	4	HHNQSTAINLNNPESQSMHLETR4	43409.2	52805.5	54775.1
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	HHPAVVEQWSK	HHPAVVEQWSK	3	HHPAVVEQWSK3	16437.6	27487.3	17693.4
P83871	P83871	PHF5A_RAT	Phf5a	PHD finger-like domain-containing protein 5A	1	HHPDLIFCR	HHPDLIFC(UniMod:4)R	3	HHPDLIFC(UniMod:4)R3	87488.1	39612.9	39797.7
P51635	P51635	AK1A1_RAT	Akr1a1	Aldo-keto reductase family 1 member A1	1	HHPEDVEPAVR	HHPEDVEPAVR	3	HHPEDVEPAVR3	41737.2	43502.8	30783.6
P51635	P51635	AK1A1_RAT	Akr1a1	Aldo-keto reductase family 1 member A1	1	HHPEDVEPAVRK	HHPEDVEPAVRK	3	HHPEDVEPAVRK3	3558.1		2197.52
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	HHPHFLTHK	HHPHFLTHK	2	HHPHFLTHK2			26622.8
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	HHPHFLTHK	HHPHFLTHK	3	HHPHFLTHK3			12102.7
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	HHPNALNLQLR	HHPNALNLQLR	3	HHPNALNLQLR3	18157.5	15847.5	15275.8
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	HHPSIRPTLEGGK	HHPSIRPTLEGGK	3	HHPSIRPTLEGGK3	56138.4	42090.4	40260.3
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	HHPSIRPTLEGGKR	HHPSIRPTLEGGKR	4	HHPSIRPTLEGGKR4	38426.9	9114.12	5201.11
Q6P752	Q6P752	TOIP2_RAT	Tor1aip2	Torsin-1A-interacting protein 2	1	HHPYSEHVGGDTLVLDPNYSQSDLGGR	HHPYSEHVGGDTLVLDPNYSQSDLGGR	4	HHPYSEHVGGDTLVLDPNYSQSDLGGR4	12226	4619.48	8137.48
A0A8I5ZLY7	A0A8I5ZLY7	A0A8I5ZLY7_RAT	Tapbp	TAP binding protein	1	HHSDGSVSQSGHLQLPPVTDK	HHSDGSVSQSGHLQLPPVTDK	3	HHSDGSVSQSGHLQLPPVTDK3	6332.55	4334.85	
A0A8I5ZLY7	A0A8I5ZLY7	A0A8I5ZLY7_RAT	Tapbp	TAP binding protein	1	HHSDGSVSQSGHLQLPPVTDK	HHSDGSVSQSGHLQLPPVTDK	4	HHSDGSVSQSGHLQLPPVTDK4	48615.4	43831.6	59889.8
Q9JHW5	Q9JHW5	VAMP7_RAT	Vamp7	Vesicle-associated membrane protein 7	1	HHSENQSLDR	HHSENQSLDR	2	HHSENQSLDR2			13369.2
P41243	P41243	MATK_RAT	Matk	Megakaryocyte-associated tyrosine-protein kinase	1	HHSSGQEGLLAAAALR	HHSSGQEGLLAAAALR	3	HHSSGQEGLLAAAALR3	13650.6	14260.4	10050
P41243	P41243	MATK_RAT	Matk	Megakaryocyte-associated tyrosine-protein kinase	1	HHSSGQEGLLAAAALR	HHSSGQEGLLAAAALR	4	HHSSGQEGLLAAAALR4	17154.9	13956.6	12883.2
B5DF48	B5DF48	B5DF48_RAT	Tyw1	tRNA 4-demethylwyosine synthase (AdoMet-dependent)	1	HHTNPVGTEWR	HHTNPVGTEWR	3	HHTNPVGTEWR3	9453.35	9744.3	6903.27
Q80WF4	Q80WF4	T132A_RAT	Tmem132a	Transmembrane protein 132A	1	HHTSLITCHR	HHTSLITC(UniMod:4)HR	3	HHTSLITC(UniMod:4)HR3			5126.13
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	HHVLGTIITDK	HHVLGTIITDK	2	HHVLGTIITDK2		756.986	3980.37
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	HHVLGTIITDK	HHVLGTIITDK	3	HHVLGTIITDK3	74041.2	27885.7	64313.1
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	HHVLHDQNVDK	HHVLHDQNVDK	2	HHVLHDQNVDK2			22896.6
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	HHVLHDQNVDKR	HHVLHDQNVDKR	2	HHVLHDQNVDKR2			6576.13
A0A8J8YLI4	A0A8J8YLI4	A0A8J8YLI4_RAT	Ung	Uracil-DNA glycosylase	1	HHVLQTAHPSPLSVYR	HHVLQTAHPSPLSVYR	4	HHVLQTAHPSPLSVYR4	14701.5	9701.42	
A0A8I5ZMX2	A0A8I5ZMX2	A0A8I5ZMX2_RAT	Adamts3	ADAM metallopeptidase with thrombospondin type 1, motif 3	1	HHWLPHEHPDSK	HHWLPHEHPDSK	4	HHWLPHEHPDSK4			11799
D3ZD32	E9PU01;D3ZD32;A0A8I6GIY0	CHD5_RAT	Chd5	Chromodomain-helicase-DNA-binding protein 5	0	HHYEQQQEDLAR	HHYEQQQEDLAR	2	HHYEQQQEDLAR2	16334.8	1827.6	
D3ZD32	E9PU01;D3ZD32;A0A8I6GIY0	CHD5_RAT	Chd5	Chromodomain-helicase-DNA-binding protein 5	0	HHYEQQQEDLAR	HHYEQQQEDLAR	3	HHYEQQQEDLAR3	46336	19190.2	6726.7
B1WBN7	B1WBN7	B1WBN7_RAT	Fam20c	FAM20C	1	HHYETFEK	HHYETFEK	2	HHYETFEK2	14824.2	6731.81	4700.85
A0A8I5ZQG6	A0A8I5ZQG6	A0A8I5ZQG6_RAT	Sez6l2	Seizure related 6 homolog like 2	1	HHYQAGESLR	HHYQAGESLR	2	HHYQAGESLR2			3113.97
A0A8I5ZQG6	A0A8I5ZQG6	A0A8I5ZQG6_RAT	Sez6l2	Seizure related 6 homolog like 2	1	HHYQAGESLR	HHYQAGESLR	3	HHYQAGESLR3	22851.1		22794.8
P15429	P15429	ENOB_RAT	Eno3	Beta-enolase	1	HIADLAGNPDLVLPVPAFNVINGGSHAGNK	HIADLAGNPDLVLPVPAFNVINGGSHAGNK	4	HIADLAGNPDLVLPVPAFNVINGGSHAGNK4	1.20307e+06	197643	77570
P04764	M0R5J4;P04764	ENOA_RAT	Eno1	Alpha-enolase	0	HIADLAGNPEVILPVPAFNVINGGSHAGNK	HIADLAGNPEVILPVPAFNVINGGSHAGNK	4	HIADLAGNPEVILPVPAFNVINGGSHAGNK4	112103	64922.6	127276
Q4V8B7	Q4V8B7	HSDL1_RAT	Hsdl1	Inactive hydroxysteroid dehydrogenase-like protein 1	1	HIADTYR	HIADTYR	2	HIADTYR2	155098	159040	
P04692	P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	1	HIAEDADRK	HIAEDADRK	2	HIAEDADRK2			27690
P58775	P58775	TPM2_RAT	Tpm2	Tropomyosin beta chain	1	HIAEDSDR	HIAEDSDR	2	HIAEDSDR2			15367.8
Q63610	Q63610;P09495	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	0	HIAEEADR	HIAEEADR	1	HIAEEADR1			10406.4
Q63610	Q63610;P09495	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	0	HIAEEADR	HIAEEADR	2	HIAEEADR2			415867
Q63610	Q63610;P09495	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	0	HIAEEADRK	HIAEEADRK	2	HIAEEADRK2			2.95407e+06
D3ZFK6	D3ZFK6	D3ZFK6_RAT	Atg16l1	Autophagy related 16-like 1	1	HIAEELR	HIAEELR	2	HIAEELR2		8134.56	8300.43
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	HIAELIFYMEELR	HIAELIFYMEELR	3	HIAELIFYMEELR3	38167.8	22715.6	31649.7
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	HIAEVSQEVTR	HIAEVSQEVTR	2	HIAEVSQEVTR2	24454.8	23126.1	28571.3
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	HIAEVSQEVTR	HIAEVSQEVTR	3	HIAEVSQEVTR3	74473.8	73845	71186.7
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	HIAFTPESQR	HIAFTPESQR	2	HIAFTPESQR2	120000	109142	107047
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	HIAFTPESQR	HIAFTPESQR	3	HIAFTPESQR3	115147	124298	137760
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	HIAFTPESQRR	HIAFTPESQRR	3	HIAFTPESQRR3	23357.6	17728.7	27075.9
Q5FVC7	Q5FVC7	ACAP2_RAT	Acap2	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2	1	HIALDYVLQINVLQSK	HIALDYVLQINVLQSK	2	HIALDYVLQINVLQSK2	3437.33		
D4ACF2	D4ACF2	D4ACF2_RAT	Trim21	RING-type E3 ubiquitin transferase	1	HIANMVENLK	HIANMVENLK	2	HIANMVENLK2	6358.6	5431.89	
E9PT66	E9PT66	E9PT66_RAT	Sf3b3	Splicing factor 3b, subunit 3	1	HIANYISGIQTIGHR	HIANYISGIQTIGHR	3	HIANYISGIQTIGHR3	69979	21865	13394.8
E9PT66	E9PT66	E9PT66_RAT	Sf3b3	Splicing factor 3b, subunit 3	1	HIANYISGIQTIGHR	HIANYISGIQTIGHR	4	HIANYISGIQTIGHR4	8367.52		
P07323	P07323	ENOG_RAT	Eno2	Gamma-enolase	1	HIAQLAGNSDLILPVPAFNVINGGSHAGNK	HIAQLAGNSDLILPVPAFNVINGGSHAGNK	4	HIAQLAGNSDLILPVPAFNVINGGSHAGNK4	50157.1		53406.2
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	HIAQVQGAQSSDQTEICK	HIAQVQGAQSSDQTEIC(UniMod:4)K	3	HIAQVQGAQSSDQTEIC(UniMod:4)K3	10665.7	12600.5	6441.74
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	HIASGGNGLAWK	HIASGGNGLAWK	2	HIASGGNGLAWK2	6462.94	3241.42	
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	HIAVFPCK	HIAVFPC(UniMod:4)K	2	HIAVFPC(UniMod:4)K2	52571.4	72713.3	59380.3
A0A8I5ZTW6	A0A8I5ZTW6	A0A8I5ZTW6_RAT	Gopc	Golgi associated PDZ and coiled-coil motif containing	1	HIAVLQAEVYGAR	HIAVLQAEVYGAR	3	HIAVLQAEVYGAR3	7740.57	4788.41	5468.81
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	HIAVVLEEIPK	HIAVVLEEIPK	2	HIAVVLEEIPK2	11474.2	11007.6	13911.4
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	HIAVVLEEIPK	HIAVVLEEIPK	3	HIAVVLEEIPK3	18193.6	24068	24005.9
Q5FVF9	Q5FVF9	BTD_RAT	Btd	Biotinidase	1	HIAYPTAWMNQLPLLAAIEIQK	HIAYPTAWMNQLPLLAAIEIQK	3	HIAYPTAWMNQLPLLAAIEIQK3	28614.3	24652.5	22176.9
P83121	P83121	UP3_RAT		Urinary protein 3	1	HICQTYPDEICAWVVVTTR	HIC(UniMod:4)QTYPDEIC(UniMod:4)AWVVVTTR	3	HIC(UniMod:4)QTYPDEIC(UniMod:4)AWVVVTTR3	42807.4	28798	39047
P07943	P07943	ALDR_RAT	Akr1b1	Aldo-keto reductase family 1 member B1	1	HIDCAQVYQNEK	HIDC(UniMod:4)AQVYQNEK	2	HIDC(UniMod:4)AQVYQNEK2	1518.44		961.538
P07943	P07943	ALDR_RAT	Akr1b1	Aldo-keto reductase family 1 member B1	1	HIDCAQVYQNEK	HIDC(UniMod:4)AQVYQNEK	3	HIDC(UniMod:4)AQVYQNEK3	4397.33	10078.6	8296.27
P51635	P51635	AK1A1_RAT	Akr1a1	Aldo-keto reductase family 1 member A1	1	HIDCASVYGNETEIGEALK	HIDC(UniMod:4)ASVYGNETEIGEALK	3	HIDC(UniMod:4)ASVYGNETEIGEALK3	10085.8	9937.81	12182
Q66H50	Q66H50	FACR1_RAT	Far1	Fatty acyl-CoA reductase 1	1	HIDEVVYPPPVDPK	HIDEVVYPPPVDPK	3	HIDEVVYPPPVDPK3	2169.02	8202.86	6818.9
P29314	M0RB65;D3ZV50;P29314	RS9_RAT	Rps9	Small ribosomal subunit protein uS4	0	HIDFSLR	HIDFSLR	2	HIDFSLR2	102490	62034.3	54720.4
B5DEZ6	B5DEZ6	B5DEZ6_RAT	Gnpda2	Glucosamine-6-phosphate isomerase	1	HIDIDPNNAHILDGNAADLQAECDAFEEK	HIDIDPNNAHILDGNAADLQAEC(UniMod:4)DAFEEK	4	HIDIDPNNAHILDGNAADLQAEC(UniMod:4)DAFEEK4	2640.11	1816.63	930.353
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	HIDLVEGDEGR	HIDLVEGDEGR	2	HIDLVEGDEGR2	82220.3	76322.5	69334.1
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	HIDLVEGDEGR	HIDLVEGDEGR	3	HIDLVEGDEGR3	153849	159848	161151
P08689	P08689	SHBG_RAT	Shbg	Sex hormone-binding globulin	1	HIDPIQSAQDSPAK	HIDPIQSAQDSPAK	2	HIDPIQSAQDSPAK2	10246.8	10695.6	7404.52
P08689	P08689	SHBG_RAT	Shbg	Sex hormone-binding globulin	1	HIDPIQSAQDSPAK	HIDPIQSAQDSPAK	3	HIDPIQSAQDSPAK3	13486	13121.6	20418.5
Q6P9U3	Q6P9U3	COMD3_RAT	Commd3	COMM domain-containing protein 3	1	HIDPVVLK	HIDPVVLK	2	HIDPVVLK2	3786.19	5259.58	3572.84
Q3LRZ1	Q3LRZ1	CRTC2_RAT	Crtc2	CREB-regulated transcription coactivator 2	1	HIDSSPYSPAYLSPPPESGWR	HIDSSPYSPAYLSPPPESGWR	3	HIDSSPYSPAYLSPPPESGWR3	8802.01	12110.8	5361.19
P11915	P11915	SCP2_RAT	Scp2	Sterol carrier protein 2	1	HIDVLINK	HIDVLINK	2	HIDVLINK2	8127.92		7904.03
D3ZCT7	D3ZCT7	D3ZCT7_RAT	Sec23b	Protein transport protein SEC23	1	HIEAAFDQEAAAVLMAR	HIEAAFDQEAAAVLMAR	3	HIEAAFDQEAAAVLMAR3	1473.49	3433.76	
D3ZDR5	D3ZDR5	D3ZDR5_RAT	Prmt9	Protein arginine methyltransferase 9	1	HIEDEAAVLQRPK	HIEDEAAVLQRPK	3	HIEDEAAVLQRPK3	7233.27	9680.9	9032.54
Q8R4Z9	Q8R4Z9	MFN1_RAT	Mfn1	Mitofusin-1	1	HIEDGMGR	HIEDGMGR	2	HIEDGMGR2	3769.08	2880.59	
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	HIEEGLGR	HIEEGLGR	2	HIEEGLGR2		325364	
P14882	P14882	PCCA_RAT	Pcca	Propionyl-CoA carboxylase alpha chain, mitochondrial	1	HIEIQVLGDK	HIEIQVLGDK	2	HIEIQVLGDK2	6732.61	14367.8	8289.37
M0R6S5	M0R6S5	M0R6S5_RAT	Chsy3	Hexosyltransferase	1	HIELIQEYQNR	HIELIQEYQNR	3	HIELIQEYQNR3	3329.35	4463.49	
A0A140UHX9	A0A140UHX9	A0A140UHX9_RAT	Ccz1	CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated	1	HIEPELAGR	HIEPELAGR	2	HIEPELAGR2	21462.9	29003.6	17009.8
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	HIEVQVAQETR	HIEVQVAQETR	2	HIEVQVAQETR2	9788.83	12176.6	8610.12
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	HIEVQVAQETR	HIEVQVAQETR	3	HIEVQVAQETR3	38855.7	43807.1	40157.7
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	HIEWESVLTNTAGCLR	HIEWESVLTNTAGC(UniMod:4)LR	2	HIEWESVLTNTAGC(UniMod:4)LR2	1864.96	2453.53	4553.79
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	HIEWESVLTNTAGCLR	HIEWESVLTNTAGC(UniMod:4)LR	3	HIEWESVLTNTAGC(UniMod:4)LR3	16044	11641.5	13354.1
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	HIFCYLYSCFQR	HIFC(UniMod:4)YLYSC(UniMod:4)FQR	2	HIFC(UniMod:4)YLYSC(UniMod:4)FQR2		2122.03	
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	HIFCYLYSCFQR	HIFC(UniMod:4)YLYSC(UniMod:4)FQR	3	HIFC(UniMod:4)YLYSC(UniMod:4)FQR3	6871.44	4864.2	4807.39
P48500	A0A8I5ZVI4;P48500	TPIS_RAT	Tpi1	Triosephosphate isomerase	0	HIFGESDELIGQK	HIFGESDELIGQK	2	HIFGESDELIGQK2	40305.1	39011.3	34339.8
P48500	A0A8I5ZVI4;P48500	TPIS_RAT	Tpi1	Triosephosphate isomerase	0	HIFGESDELIGQK	HIFGESDELIGQK	3	HIFGESDELIGQK3	102697	89872.3	107102
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	HIFLFTDLLLCTK	HIFLFTDLLLC(UniMod:4)TK	3	HIFLFTDLLLC(UniMod:4)TK3	6489.17	7536.87	6337.67
B2GUY2	B2GUY2	TFR2_RAT	Tfr2	Transferrin receptor protein 2	1	HIFLGQGDHTLGALVEHLR	HIFLGQGDHTLGALVEHLR	4	HIFLGQGDHTLGALVEHLR4	2429.42		1824.59
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	HIFMLTLPTVTESTIDR	HIFMLTLPTVTESTIDR	3	HIFMLTLPTVTESTIDR3	20787.8	17495.4	11227.2
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	HIFMLTLPTVTESTIDRK	HIFMLTLPTVTESTIDRK	3	HIFMLTLPTVTESTIDRK3	13647	14250.7	15152.4
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	HIFMNNYHLCNEISER	HIFMNNYHLC(UniMod:4)NEISER	3	HIFMNNYHLC(UniMod:4)NEISER3		9058.93	3521.5
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	HIFNAIK	HIFNAIK	2	HIFNAIK2	33341.5	15317.2	19266.3
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	HIFSDDSSELTIR	HIFSDDSSELTIR	2	HIFSDDSSELTIR2	240144	236217	257591
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	HIFSDDSSELTIR	HIFSDDSSELTIR	3	HIFSDDSSELTIR3	1.03297e+06	1.01964e+06	1.08137e+06
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	HIFWGSGSHTLSALVENLR	HIFWGSGSHTLSALVENLR	3	HIFWGSGSHTLSALVENLR3	24837.8	15552	19379
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	HIFWGSGSHTLSALVENLR	HIFWGSGSHTLSALVENLR	4	HIFWGSGSHTLSALVENLR4	41079.3	35638.7	44619
Q5U1Y1	Q5U1Y1	RAB34_RAT	Rab34	Ras-related protein Rab-34	1	HIGDVVR	HIGDVVR	2	HIGDVVR2	21806	22490.1	19453.3
Q5EB73	Q5EB73	PGAP4_RAT	Pgap4	Post-GPI attachment to proteins factor 4	1	HIGLFSSLR	HIGLFSSLR	2	HIGLFSSLR2	14118.7	13634.9	20202.2
P17220	P17220	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	1	HIGLVYSGMGPDYR	HIGLVYSGMGPDYR	2	HIGLVYSGMGPDYR2	369506	368050	386595
P17220	P17220	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	1	HIGLVYSGMGPDYR	HIGLVYSGMGPDYR	3	HIGLVYSGMGPDYR3	2.04018e+06	34031.9	2.33866e+06
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	HIGQGEEPEPLESHEEK	HIGQGEEPEPLESHEEK	2	HIGQGEEPEPLESHEEK2	7772.19	2731.83	3170.72
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	HIGQGEEPEPLESHEEK	HIGQGEEPEPLESHEEK	3	HIGQGEEPEPLESHEEK3	327618	324498	297862
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	HIGQGEEPEPLESHEEK	HIGQGEEPEPLESHEEK	4	HIGQGEEPEPLESHEEK4	159436	179065	178520
B5DFI9	B5DFI9	B5DFI9_RAT	Pdk3	Protein-serine/threonine kinase	1	HIGSIDPTCNVADVVK	HIGSIDPTC(UniMod:4)NVADVVK	3	HIGSIDPTC(UniMod:4)NVADVVK3	7857.61		12970.5
Q63065	Q63065	PDK1_RAT	Pdk1	[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial	1	HIGSINPNCDVVEVIK	HIGSINPNC(UniMod:4)DVVEVIK	3	HIGSINPNC(UniMod:4)DVVEVIK3	2025.29	4063.02	
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	HIGTSAIMDLLLR	HIGTSAIMDLLLR	3	HIGTSAIMDLLLR3	122998	86845.8	78221.2
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	HIGTSALMDLLLR	HIGTSALMDLLLR	2	HIGTSALMDLLLR2	56391.4	48442.8	29631.8
Q7TP47	Q7TP47	HNRPQ_RAT	Syncrip	Heterogeneous nuclear ribonucleoprotein Q	1	HIGVCISVANNR	HIGVC(UniMod:4)ISVANNR	3	HIGVC(UniMod:4)ISVANNR3	8069.24	6201.42	
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	HIGVLGTSK	HIGVLGTSK	2	HIGVLGTSK2	24723.8	14564.7	23704.7
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	HIGWKDFTAYR	HIGWKDFTAYR	3	HIGWKDFTAYR3	55812.6	56514	48049.2
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	HIGWVTSELPGGDNHIIK	HIGWVTSELPGGDNHIIK	4	HIGWVTSELPGGDNHIIK4	12414.1	12386.8	21488.4
P18298	P18298	METK2_RAT	Mat2a	S-adenosylmethionine synthase isoform type-2	1	HIGYDDSSK	HIGYDDSSK	2	HIGYDDSSK2	59362.4	51888	57097.7
Q9EQG6	Q9EQG6	KDIS_RAT	Kidins220	Kinase D-interacting substrate of 220 kDa	1	HIGYLELLFK	HIGYLELLFK	2	HIGYLELLFK2	4479.93		
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	HIHDEGLR	HIHDEGLR	2	HIHDEGLR2			3675.24
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	HIHITQATETTTTR	HIHITQATETTTTR	2	HIHITQATETTTTR2	25895	17411.2	19356.3
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	HIHITQATETTTTR	HIHITQATETTTTR	3	HIHITQATETTTTR3	104598	80951.5	97661.3
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	HIHITQATETTTTR	HIHITQATETTTTR	4	HIHITQATETTTTR4	17400.5	14421.8	13798.9
A1EC95	A1EC95	HEAT6_RAT	Heatr6	HEAT repeat-containing protein 6	1	HIHSVQALAGDTAK	HIHSVQALAGDTAK	3	HIHSVQALAGDTAK3	4340.78		
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	HIIALWQFLSAHK	HIIALWQFLSAHK	3	HIIALWQFLSAHK3	4825.13	6585.9	4849.59
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	HIIEDPCTLR	HIIEDPC(UniMod:4)TLR	2	HIIEDPC(UniMod:4)TLR2	19941.7	14425.5	23577.8
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	HIIEDPCTLR	HIIEDPC(UniMod:4)TLR	3	HIIEDPC(UniMod:4)TLR3	7699.62	8733.49	11216.4
P63144	P63144;P62483	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	0	HIIEGLK	HIIEGLK	2	HIIEGLK2	46556.5	42116.2	46797.4
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	HIIGLVPASISEPPPFK	HIIGLVPASISEPPPFK	3	HIIGLVPASISEPPPFK3	17423.6	30197	15336.6
Q3MIB4	Q3MIB4	LONP2_RAT	Lonp2	Lon protease homolog 2, peroxisomal	1	HIIIPQR	HIIIPQR	2	HIIIPQR2	5554.37	4204.22	5376.74
Q68FS1	Q68FS1	NUBP2_RAT	Nubp2	Cytosolic Fe-S cluster assembly factor NUBP2	1	HIILVLSGK	HIILVLSGK	2	HIILVLSGK2	15608.8	24171.4	16324.2
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	HIINHAVVNEDPNAR	HIINHAVVNEDPNAR	3	HIINHAVVNEDPNAR3	48125.7	48472.7	38952.2
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	HIINHAVVNEDPNAR	HIINHAVVNEDPNAR	4	HIINHAVVNEDPNAR4	25463.6	36020.5	25099.8
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	HIISPNPHVR	HIISPNPHVR	3	HIISPNPHVR3	18393.7	14265.9	14662.7
O35547	O35547	ACSL4_RAT	Acsl4	Long-chain-fatty-acid--CoA ligase 4	1	HIIYVDNK	HIIYVDNK	2	HIIYVDNK2	11969.6	10157.8	15227.9
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	HILAAEQK	HILAAEQK	2	HILAAEQK2		46607.6	
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	HILAILQDYPSLRPPIDHLCELLPR	HILAILQDYPSLRPPIDHLC(UniMod:4)ELLPR	4	HILAILQDYPSLRPPIDHLC(UniMod:4)ELLPR4	17719.9	15607.2	17173.1
Q63483	Q63483	Q63483_RAT	Rab38	Ras-related protein Rab	1	HILANECDFIESIEPDIVKPHLTSPK	HILANEC(UniMod:4)DFIESIEPDIVKPHLTSPK	4	HILANEC(UniMod:4)DFIESIEPDIVKPHLTSPK4	53100.4	39178.8	65833.4
Q6TA25	Q6TA25	FGOP2_RAT	Fgfr1op2	FGFR1 oncogene partner 2 homolog	1	HILEAPQHGLER	HILEAPQHGLER	3	HILEAPQHGLER3	16430.9		12262.1
A0A8I6AZI9	A0A8I6AZI9	A0A8I6AZI9_RAT	Ubash3a	Ubiquitin associated and SH3 domain containing, A	1	HILEELK	HILEELK	2	HILEELK2	8218.34	3983.44	3266.32
Q923V4	Q923V4	FBX6_RAT	Fbxo6	F-box only protein 6	1	HILFQHGGK	HILFQHGGK	2	HILFQHGGK2	11364.5	10124.5	14368.1
F7EMB2	F7EMB2	F7EMB2_RAT	Rtraf	RNA transcription, translation and transport factor protein	1	HILGFDTGDAVLNEAAQILR	HILGFDTGDAVLNEAAQILR	3	HILGFDTGDAVLNEAAQILR3		5061.91	4984.41
D3ZBM7	D3ZBM7	HACE1_RAT	Hace1	E3 ubiquitin-protein ligase HACE1	1	HILGIPVNYQDVASIDPEYAK	HILGIPVNYQDVASIDPEYAK	3	HILGIPVNYQDVASIDPEYAK3	1459.4	3419.73	
P81795	C9WPN6;P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	0	HILILQNK	HILILQNK	2	HILILQNK2	73923.4	77832.1	74231.2
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	HILINESK	HILINESK	2	HILINESK2	29729	17032.1	26456
Q02874	B1WC28;Q02874	H2AY_RAT	Macroh2a1	Core histone macro-H2A.1	0	HILLAVANDEELNQLLK	HILLAVANDEELNQLLK	3	HILLAVANDEELNQLLK3	6534.32	2506.65	
G3V6W5	G3V6W5	G3V6W5_RAT	Ifih1	RNA helicase	1	HILNICANLDAFTIK	HILNIC(UniMod:4)ANLDAFTIK	3	HILNIC(UniMod:4)ANLDAFTIK3	3304.69		2685.18
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	HILNPHVQNGISLMMWNTFLVK	HILNPHVQNGISLMMWNTFLVK	4	HILNPHVQNGISLMMWNTFLVK4	3734.81	4192.55	5062.19
A0A0G2JVT8	A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	1	HILPFSTLK	HILPFSTLK	2	HILPFSTLK2	2512.8	2363.69	2046.21
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	HILVCGFWDK	HILVC(UniMod:4)GFWDK	2	HILVC(UniMod:4)GFWDK2	6814.56	2877.72	6376.13
F1M7P8	F1M7P8	F1M7P8_RAT	Spryd3	SPRY domain containing 3	1	HILVDGDTLSYHGNSGEVGCYVASR	HILVDGDTLSYHGNSGEVGC(UniMod:4)YVASR	4	HILVDGDTLSYHGNSGEVGC(UniMod:4)YVASR4	2250.19	4201.17	9347.26
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	HILVGNK	HILVGNK	2	HILVGNK2	11752.2	9188.6	13719.7
A0A8I5ZZZ6	A0A8I5ZZZ6	A0A8I5ZZZ6_RAT	Riok3	Serine/threonine-protein kinase RIO3	1	HILVMSFIGHDQVPAPK	HILVMSFIGHDQVPAPK	3	HILVMSFIGHDQVPAPK3	15929.5	30082.2	26044.7
A0A8I5ZZZ6	A0A8I5ZZZ6	A0A8I5ZZZ6_RAT	Riok3	Serine/threonine-protein kinase RIO3	1	HILVMSFIGHDQVPAPK	HILVMSFIGHDQVPAPK	4	HILVMSFIGHDQVPAPK4	15769.2	16385.9	17351.1
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	HILVSQGLIR	HILVSQGLIR	2	HILVSQGLIR2	7382.61	13712	23679
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	HILYNEQR	HILYNEQR	2	HILYNEQR2	86918.1	79179.2	82083.3
P09895	A0A8I6GKE4;P09895	RL5_RAT	Rpl5	Large ribosomal subunit protein uL18	0	HIMGQNVADYMR	HIMGQNVADYMR	2	HIMGQNVADYMR2	7492.74	7152.79	8011.53
P09895	A0A8I6GKE4;P09895	RL5_RAT	Rpl5	Large ribosomal subunit protein uL18	0	HIMGQNVADYMR	HIMGQNVADYMR	3	HIMGQNVADYMR3	62170.4	57440.4	50069
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	HIMLHPLYNPSTFENDLGLVELSESPR	HIMLHPLYNPSTFENDLGLVELSESPR	4	HIMLHPLYNPSTFENDLGLVELSESPR4	2.03263e+06	2.03518e+06	2.18848e+06
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	HIMQYIAAVTNPSQR	HIMQYIAAVTNPSQR	2	HIMQYIAAVTNPSQR2	4032.24	7618.11	10844.8
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	HIMQYIAAVTNPSQR	HIMQYIAAVTNPSQR	3	HIMQYIAAVTNPSQR3	24795.5	44262	35672.7
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	HINDSAPEVR	HINDSAPEVR	2	HINDSAPEVR2	49351.3	56516.8	48487.4
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	HINDSVFLTTAEVISQQVSDK	HINDSVFLTTAEVISQQVSDK	3	HINDSVFLTTAEVISQQVSDK3	21343.7	26355.7	26066.8
A0A0G2K2Z2	A0A0G2K2Z2	A0A0G2K2Z2_RAT	Inpp5k	Inositol polyphosphate-5-phosphatase K	1	HINDYVSYVWVGDNQVSR	HINDYVSYVWVGDNQVSR	3	HINDYVSYVWVGDNQVSR3	51791.1	48973.8	50943.4
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	HINEHSFNNFQMK	HINEHSFNNFQMK	3	HINEHSFNNFQMK3	29044.3	14780.5	16948.5
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	HINEHSFNNFQMK	HINEHSFNNFQMK	4	HINEHSFNNFQMK4	11763.2	2540.42	4030.09
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	HINELSMK	HINELSMK	2	HINELSMK2	32804.8	39812.4	46948.4
B1H264	B1H264	B1H264_RAT	Tbc1d17	TBC1 domain family, member 17	1	HINELTMK	HINELTMK	2	HINELTMK2	6522.56	5567.78	4255.75
Q63470	A0A8I5ZP97;Q63470	DYR1A_RAT	Dyrk1a	Dual specificity tyrosine-phosphorylation-regulated kinase 1A	0	HINEVYYAK	HINEVYYAK	2	HINEVYYAK2	16657.8	17857.4	16090
Q5XIP1	Q5XIP1	PELO_RAT	Pelo	Protein pelota homolog	1	HINFEVVK	HINFEVVK	2	HINFEVVK2	47713.1	33221.3	56345.1
Q6AYF8	Q6AYF8;D4A392	Q6AYF8_RAT	Serpinb9	Serpin family B member 9	0	HINTWVSK	HINTWVSK	2	HINTWVSK2	37247.3	34122.2	35812.6
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	HINVTIEGGEK	HINVTIEGGEK	2	HINVTIEGGEK2	9729.26	5240.48	12720.7
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	HINVTIEGGEK	HINVTIEGGEK	3	HINVTIEGGEK3	6717.56	5385.65	
D4AE24	D4AE24	D4AE24_RAT	Rps6kb2	Ribosomal protein S6 kinase	1	HINWDDLLAHR	HINWDDLLAHR	3	HINWDDLLAHR3	8717.72	12907.2	9432.86
P67999	P67999	KS6B1_RAT	Rps6kb1	Ribosomal protein S6 kinase beta-1	1	HINWEELLAR	HINWEELLAR	3	HINWEELLAR3	1564.43	2505.19	1080.92
F1M386	F1M386	RPGF2_RAT	Rapgef2	Rap guanine nucleotide exchange factor 2	1	HIPAALPVSGTLSSSNPDLLQSHHR	HIPAALPVSGTLSSSNPDLLQSHHR	4	HIPAALPVSGTLSSSNPDLLQSHHR4	3797.27	3473.74	2023.15
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	HIPDAPEEFISELAEHLIKPLNK	HIPDAPEEFISELAEHLIKPLNK	4	HIPDAPEEFISELAEHLIKPLNK4	6412.45	10015.1	9595.4
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	HIPECIQVQASTVK	HIPEC(UniMod:4)IQVQASTVK	3	HIPEC(UniMod:4)IQVQASTVK3	10383.3	12930.2	15342.6
P97532	P97532	THTM_RAT	Mpst	3-mercaptopyruvate sulfurtransferase	1	HIPGAAFFDIDR	HIPGAAFFDIDR	3	HIPGAAFFDIDR3	71767.1	65632.6	70974.9
Q4V7C7	A0A8I6GL35;Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	0	HIPIAGR	HIPIAGR	2	HIPIAGR2	891322	690752	
Q29TV8	Q29TV8	GKN2_RAT	Gkn2	Gastrokine-2	1	HIPLYEGEVATKPR	HIPLYEGEVATKPR	3	HIPLYEGEVATKPR3	21538.4	14408.8	13360.5
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	HIPQLQEQLSK	HIPQLQEQLSK	2	HIPQLQEQLSK2	37651.8		31553.7
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	HIPQLQEQLSK	HIPQLQEQLSK	3	HIPQLQEQLSK3	25130.9	23727.4	17739.5
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	HIPSSPLQQPASPSLPGDSPLSTEAR	HIPSSPLQQPASPSLPGDSPLSTEAR	3	HIPSSPLQQPASPSLPGDSPLSTEAR3	38188.2	40260.4	47799.6
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	HIQALAIR	HIQALAIR	2	HIQALAIR2	22774.4	9685.73	23898.2
D3ZK09	D3ZK09	D3ZK09_RAT	Scyl3	SCY1 like pseudokinase 3	1	HIQEEYYSTLLQTGDQFSHTIK	HIQEEYYSTLLQTGDQFSHTIK	3	HIQEEYYSTLLQTGDQFSHTIK3	4271.5	5428.31	
D3ZK09	D3ZK09	D3ZK09_RAT	Scyl3	SCY1 like pseudokinase 3	1	HIQEEYYSTLLQTGDQFSHTIK	HIQEEYYSTLLQTGDQFSHTIK	4	HIQEEYYSTLLQTGDQFSHTIK4	5980.27	4753.98	
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	HIQFTADGK	HIQFTADGK	2	HIQFTADGK2	13298.7	8520	6075.96
Q6QI44	Q6QI44	NAA25_RAT	Naa25	N-alpha-acetyltransferase 25, NatB auxiliary subunit	1	HIQHDTIGYLLTR	HIQHDTIGYLLTR	3	HIQHDTIGYLLTR3	18947.8	11667.5	5472.37
B4F7E7	B4F7E7	PALS1_RAT	Pals1	Protein PALS1	1	HIQHTLVDSQSQEDISLLLQLVQNR	HIQHTLVDSQSQEDISLLLQLVQNR	4	HIQHTLVDSQSQEDISLLLQLVQNR4	3178.7	3815.97	
D3ZAE6	D3ZAE6	D3ZAE6_RAT	Vasn	Vasorin	1	HIQPGAFDALDHLLELK	HIQPGAFDALDHLLELK	3	HIQPGAFDALDHLLELK3	3250.31	5040.83	4977.33
D3ZAE6	D3ZAE6	D3ZAE6_RAT	Vasn	Vasorin	1	HIQPGAFDALDHLLELK	HIQPGAFDALDHLLELK	4	HIQPGAFDALDHLLELK4	1862.69	2237.3	
D3ZAE6	D3ZAE6	D3ZAE6_RAT	Vasn	Vasorin	1	HIQPGAFDALDHLLELKLPDNELR	HIQPGAFDALDHLLELKLPDNELR	4	HIQPGAFDALDHLLELKLPDNELR4	4220.68	39800.3	4378.22
Q5RKH6	Q5RKH6	OS9_RAT	Os9	Protein OS-9	1	HIQQYHMEDSEIK	HIQQYHMEDSEIK	3	HIQQYHMEDSEIK3	7995.19	12814.5	8433.4
D3ZIC2	D3ZIC2	D3ZIC2_RAT	Uroc1	urocanate hydratase	1	HISAINR	HISAINR	2	HISAINR2	84252.8		
Q6AYT7	Q6AYT7	ABD12_RAT	Abhd12	Lysophosphatidylserine lipase ABHD12	1	HISCPLLILHAEDDPVVPFHLGR	HISC(UniMod:4)PLLILHAEDDPVVPFHLGR	4	HISC(UniMod:4)PLLILHAEDDPVVPFHLGR4	40528.4	44763.7	36356.1
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	HISDTVFLEAAK	HISDTVFLEAAK	2	HISDTVFLEAAK2	10880.1	15484.6	11515.6
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	HISDTVFLEAAK	HISDTVFLEAAK	3	HISDTVFLEAAK3	12628.9	12843.4	11963.2
Q99MS0	Q99MS0	S14L2_RAT	Sec14l2	SEC14-like protein 2	1	HISPDQLPVEYGGTMTDPDGNPK	HISPDQLPVEYGGTMTDPDGNPK	3	HISPDQLPVEYGGTMTDPDGNPK3	15074.3	23761.2	13264.8
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	HISSAGTIESVNLDAIPLAIAR	HISSAGTIESVNLDAIPLAIAR	3	HISSAGTIESVNLDAIPLAIAR3	131101	121180	137662
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	HISVLAETIK	HISVLAETIK	2	HISVLAETIK2	7072.71	7030.87	
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	HISVLAETIKK	HISVLAETIKK	3	HISVLAETIKK3	13271.9	9554.53	12012.1
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	HITAAEIDTFVSLVR	HITAAEIDTFVSLVR	3	HITAAEIDTFVSLVR3	20836.9	12189.2	16568.3
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	HITEEELSVLESCLHR	HITEEELSVLESC(UniMod:4)LHR	3	HITEEELSVLESC(UniMod:4)LHR3	4999.13	3422.41	2619.12
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	HITESVNSIR	HITESVNSIR	2	HITESVNSIR2	28290.2	26823.8	18934.3
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	HITESVNSIR	HITESVNSIR	3	HITESVNSIR3	58262.9	71645.1	64817.8
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	HITIFSPEGR	HITIFSPEGR	2	HITIFSPEGR2	2.95048e+06	2.81376e+06	3.28262e+06
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	HITIFSPEGR	HITIFSPEGR	3	HITIFSPEGR3	1.12993e+06	1.02699e+06	1.2397e+06
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	HITLVFSPTR	HITLVFSPTR	2	HITLVFSPTR2	32880.1	31063.5	33866.6
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	HITLVFSPTR	HITLVFSPTR	3	HITLVFSPTR3	10693.7	8786.97	17639.6
P54690	P54690	BCAT1_RAT	Bcat1	Branched-chain-amino-acid aminotransferase, cytosolic	1	HITMDDLSTALEENR	HITMDDLSTALEENR	3	HITMDDLSTALEENR3	2662.72		3321.34
Q6AXT5	Q6AXT5	RAB21_RAT	Rab21	Ras-related protein Rab-21	1	HITTLQASFLTK	HITTLQASFLTK	2	HITTLQASFLTK2	20665.5	31942.3	
Q6AXT5	Q6AXT5	RAB21_RAT	Rab21	Ras-related protein Rab-21	1	HITTLQASFLTK	HITTLQASFLTK	3	HITTLQASFLTK3	82939.2	90066.2	116526
A0A8I6A6S4	A0A8I6A6S4	A0A8I6A6S4_RAT	Stim2	Stromal interaction molecule 2	1	HITVEDLWK	HITVEDLWK	2	HITVEDLWK2	8132.2	4442.41	4569.52
Q2THW7	Q2THW7	ZDHC5_RAT	Zdhhc5	Palmitoyltransferase ZDHHC5	1	HIVASLQER	HIVASLQER	2	HIVASLQER2	15013.6	17266.2	20629.6
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	HIVDWCGCSPNDFKPQDFLR	HIVDWC(UniMod:4)GC(UniMod:4)SPNDFKPQDFLR	3	HIVDWC(UniMod:4)GC(UniMod:4)SPNDFKPQDFLR3	52534.2	60663.1	50521.9
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	HIVDWCGCSPNDFKPQDFLR	HIVDWC(UniMod:4)GC(UniMod:4)SPNDFKPQDFLR	4	HIVDWC(UniMod:4)GC(UniMod:4)SPNDFKPQDFLR4	81089.6	130279	109233
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	HIVENAVQK	HIVENAVQK	2	HIVENAVQK2		15241	
D3ZMA2	D3ZMA2	D3ZMA2_RAT	Mtmr14	Myotubularin related protein 14	1	HIVFLEYESSEKEK	HIVFLEYESSEKEK	3	HIVFLEYESSEKEK3	4491.03	8075.77	7588.26
Q9Z0J5	Q9Z0J5	TRXR2_RAT	Txnrd2	Thioredoxin reductase 2, mitochondrial	1	HIVIATGGRPK	HIVIATGGRPK	3	HIVIATGGRPK3	20149.3	14394.3	20579.9
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	HIVLDETENFCSR	HIVLDETENFC(UniMod:4)SR	2	HIVLDETENFC(UniMod:4)SR2	3597.87	4641.93	
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	HIVLDETENFCSR	HIVLDETENFC(UniMod:4)SR	3	HIVLDETENFC(UniMod:4)SR3	47091.6	58382.1	55168.7
Q5M7U6	Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	1	HIVLSGGSTMYPGLPSR	HIVLSGGSTMYPGLPSR	2	HIVLSGGSTMYPGLPSR2	15597.7	23110.7	14582.8
Q5M7U6	Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	1	HIVLSGGSTMYPGLPSR	HIVLSGGSTMYPGLPSR	3	HIVLSGGSTMYPGLPSR3	618280	712729	745929
A0A8I6AHQ9	A0A8I6AHQ9	A0A8I6AHQ9_RAT	Xpot	Exportin-T	1	HIVPACFLAPLK	HIVPAC(UniMod:4)FLAPLK	3	HIVPAC(UniMod:4)FLAPLK3	3754.58	2307.7	
Q6AY55	Q6AY55	DCAKD_RAT	Dcakd	Dephospho-CoA kinase domain-containing protein	1	HIVQPGCPAHR	HIVQPGC(UniMod:4)PAHR	3	HIVQPGC(UniMod:4)PAHR3	25909.1		18917.4
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	HIVSNDSSDSDDEAQGPK	HIVSNDSSDSDDEAQGPK	3	HIVSNDSSDSDDEAQGPK3	2282.53		
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	HIVSWGYEDMLPAPDSNPGSSSENK	HIVSWGYEDMLPAPDSNPGSSSENK	3	HIVSWGYEDMLPAPDSNPGSSSENK3	2428.45	2687.19	1698.25
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	HIYFITGETK	HIYFITGETK	2	HIYFITGETK2	1.1991e+06	1.43497e+06	1.38506e+06
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	HIYFITGETK	HIYFITGETK	3	HIYFITGETK3	403874	479383	425501
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	HIYLGCK	HIYLGC(UniMod:4)K	2	HIYLGC(UniMod:4)K2	20986.3	16331.1	16636.2
P13221	P13221	AATC_RAT	Got1	Aspartate aminotransferase, cytoplasmic	1	HIYLMPSGR	HIYLMPSGR	2	HIYLMPSGR2	29151.3	24899.1	19466.5
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	HIYNMDPAK	HIYNMDPAK	2	HIYNMDPAK2	23159	27268.2	18922
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	HIYTISYTDLVVASYR	HIYTISYTDLVVASYR	2	HIYTISYTDLVVASYR2	109122	110810	70582.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	HIYTISYTDLVVASYR	HIYTISYTDLVVASYR	3	HIYTISYTDLVVASYR3	287538	284665	300437
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	HKDGSYSAFGDHDGKGQGNTWLTAFVLK	HKDGSYSAFGDHDGKGQGNTWLTAFVLK	4	HKDGSYSAFGDHDGKGQGNTWLTAFVLK4	119091	99619.1	94467.2
P14046	Q6IE52;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	HKDGSYSAFGDHNGQGQGNTWLTAFVLK	HKDGSYSAFGDHNGQGQGNTWLTAFVLK	4	HKDGSYSAFGDHNGQGQGNTWLTAFVLK4	380065	443981	396923
P41565	P41565	IDHG1_RAT	Idh3g	Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial	1	HKDIDILIVR	HKDIDILIVR	2	HKDIDILIVR2	2875.53		
P41565	P41565	IDHG1_RAT	Idh3g	Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial	1	HKDIDILIVR	HKDIDILIVR	3	HKDIDILIVR3	28041	36895.5	41295.2
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	HKDVIINQAK	HKDVIINQAK	3	HKDVIINQAK3	9863.96	6163	
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	HKEELDTLK	HKEELDTLK	2	HKEELDTLK2	6883.58	2382.68	2148.03
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	HKEELDTLKEEK	HKEELDTLKEEK	3	HKEELDTLKEEK3	4730.91	2415.93	
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	HKEEVYENVHSK	HKEEVYENVHSK	2	HKEEVYENVHSK2			2954.54
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	HKENLQHTQAEEEAHLLTQQR	HKENLQHTQAEEEAHLLTQQR	3	HKENLQHTQAEEEAHLLTQQR3		1797.23	794.228
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	HKENLQHTQAEEEAHLLTQQR	HKENLQHTQAEEEAHLLTQQR	4	HKENLQHTQAEEEAHLLTQQR4	36643.5	36128.8	42351.9
Q8R4A1	Q8R4A1	ERO1A_RAT	Ero1a	ERO1-like protein alpha	1	HKENTFYSWLEGLCVEK	HKENTFYSWLEGLC(UniMod:4)VEK	3	HKENTFYSWLEGLC(UniMod:4)VEK3	5872.61		
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	HKEVEAAQGVK	HKEVEAAQGVK	2	HKEVEAAQGVK2			24777
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	HKEVEAAQGVK	HKEVEAAQGVK	3	HKEVEAAQGVK3			86764.3
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	HKFPDEDSYQK	HKFPDEDSYQK	3	HKFPDEDSYQK3	28495	35352.1	36556.2
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	HKFPVFMGR	HKFPVFMGR	2	HKFPVFMGR2	846232	615397	455322
O88637	O88637	PCY2_RAT	Pcyt2	Ethanolamine-phosphate cytidylyltransferase	1	HKGPPVFTQEER	HKGPPVFTQEER	3	HKGPPVFTQEER3	5915.15	2069.05	6564.98
A1L1J9	A1L1J9	LMF2_RAT	Lmf2	Lipase maturation factor 2	1	HKIPQGGLAGALPHEDLPFWLVR	HKIPQGGLAGALPHEDLPFWLVR	4	HKIPQGGLAGALPHEDLPFWLVR4	6594.58	5559.9	5211.5
A0A0U1RRV5	A0A0U1RRV5	A0A0U1RRV5_RAT	Cluh	Clustered mitochondria protein homolog	1	HKPAFTEEDVLNIFPVVK	HKPAFTEEDVLNIFPVVK	3	HKPAFTEEDVLNIFPVVK3	4651.33		2500.05
A0A0U1RRV5	A0A0U1RRV5	A0A0U1RRV5_RAT	Cluh	Clustered mitochondria protein homolog	1	HKPAFTEEDVLNIFPVVK	HKPAFTEEDVLNIFPVVK	4	HKPAFTEEDVLNIFPVVK4	4740.91	4870.56	
D4A7R3	D4A7R3	D4A7R3_RAT	Nup205	Nucleoporin 205	1	HKPDFISLFK	HKPDFISLFK	3	HKPDFISLFK3	17103.1	11762	
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	HKPDLFSWDR	HKPDLFSWDR	3	HKPDLFSWDR3	67579.8	111345	75123.9
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	HKPFVSHFMPVMFSLTWDMACR	HKPFVSHFMPVMFSLTWDMAC(UniMod:4)R	4	HKPFVSHFMPVMFSLTWDMAC(UniMod:4)R4	4567.77	7773.11	3794.09
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	HKPGAVQETTFELGGDIHSGTALPASR	HKPGAVQETTFELGGDIHSGTALPASR	4	HKPGAVQETTFELGGDIHSGTALPASR4	2253.14	4242.33	2025.94
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	HKPGSVFSVEGENLDLAMSK	HKPGSVFSVEGENLDLAMSK	3	HKPGSVFSVEGENLDLAMSK3		4765.26	2949.91
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	HKPGSVFSVEGENLDLAMSK	HKPGSVFSVEGENLDLAMSK	4	HKPGSVFSVEGENLDLAMSK4	7337.86	4502.3	4964.98
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	HKPLDIALLQPCMVVQNTQEIQR	HKPLDIALLQPC(UniMod:4)MVVQNTQEIQR	3	HKPLDIALLQPC(UniMod:4)MVVQNTQEIQR3	10819.8	13270.6	13982
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	HKPLDIALLQPCMVVQNTQEIQR	HKPLDIALLQPC(UniMod:4)MVVQNTQEIQR	4	HKPLDIALLQPC(UniMod:4)MVVQNTQEIQR4	16849.9	25522.1	11311.4
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	HKPNIYFKPK	HKPNIYFKPK	3	HKPNIYFKPK3	24070.2	10308	10577.8
A0A8I6AL39	A0A8I6AL39	A0A8I6AL39_RAT	Fgd3	FYVE, RhoGEF and PH domain containing 3	1	HKQKSETFR	HKQKSETFR	3	HKQKSETFR3			2346.13
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	HKQYYDGSEIVVAGR	HKQYYDGSEIVVAGR	2	HKQYYDGSEIVVAGR2	3361.52	2196.49	5708.58
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	HKQYYDGSEIVVAGR	HKQYYDGSEIVVAGR	3	HKQYYDGSEIVVAGR3	241066	399584	373964
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	HKQYYDGSEIVVAGR	HKQYYDGSEIVVAGR	4	HKQYYDGSEIVVAGR4	37727.5	89859.3	98777.3
B2RYD7	B2RYD7	B2RYD7_RAT	Stt3b	dolichyl-diphosphooligosaccharide--protein glycotransferase	1	HKSSLNSSPWSGLMALGNSR	HKSSLNSSPWSGLMALGNSR	3	HKSSLNSSPWSGLMALGNSR3	3262.7	3810.89	
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	HKVPVIALVGNDAGWTQISR	HKVPVIALVGNDAGWTQISR	3	HKVPVIALVGNDAGWTQISR3	33110.2	20597.5	23475.3
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	HKVPVIALVGNDAGWTQISR	HKVPVIALVGNDAGWTQISR	4	HKVPVIALVGNDAGWTQISR4	17077.5	20246.5	17087.7
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	HLAAALDNLNK	HLAAALDNLNK	2	HLAAALDNLNK2	10644	12250.6	8463.47
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	HLAAALDNLNK	HLAAALDNLNK	3	HLAAALDNLNK3	21671.6	33224.8	26549.9
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	HLAAENR	HLAAENR	2	HLAAENR2			960993
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	HLAAENRLTEMETMQSQLMAEK	HLAAENRLTEMETMQSQLMAEK	4	HLAAENRLTEMETMQSQLMAEK4	11252.1	13652.3	21942.7
Q5BK06	Q5BK06	CCDB1_RAT	Ccndbp1	Cyclin-D1-binding protein 1	1	HLAEELR	HLAEELR	2	HLAEELR2	7870.24		
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	HLAEEYGER	HLAEEYGER	2	HLAEEYGER2	151558	132981	227673
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	HLAEHSPYYEAMK	HLAEHSPYYEAMK	3	HLAEHSPYYEAMK3	43277.7	23254.5	32644.6
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	HLAESESLLTSPPK	HLAESESLLTSPPK	3	HLAESESLLTSPPK3	10921.4	2639.97	
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	HLAGEVAK	HLAGEVAK	1	HLAGEVAK1			14748.6
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	HLAGEVAK	HLAGEVAK	2	HLAGEVAK2	182311		115997
P29457	P29457	SERPH_RAT	Serpinh1	Serpin H1	1	HLAGLGLTEAIDK	HLAGLGLTEAIDK	3	HLAGLGLTEAIDK3	7921.68		
Q64244	Q64244	CD38_RAT	Cd38	ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1	1	HLAHQYTWIQGK	HLAHQYTWIQGK	2	HLAHQYTWIQGK2		2894.67	3351.6
Q64244	Q64244	CD38_RAT	Cd38	ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1	1	HLAHQYTWIQGK	HLAHQYTWIQGK	3	HLAHQYTWIQGK3	154368	175397	163202
Q8K581	Q8K581	TXND9_RAT	Txndc9	Thioredoxin domain-containing protein 9	1	HLAILAK	HLAILAK	2	HLAILAK2	12621.3	20149.4	14930.9
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	HLAISNMPLVK	HLAISNMPLVK	2	HLAISNMPLVK2	13382.9	15226	7921.16
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	HLAISNMPLVK	HLAISNMPLVK	3	HLAISNMPLVK3	17226.4	8929.15	15472.1
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	HLAITPAR	HLAITPAR	2	HLAITPAR2	11028.7	8901.29	4997.16
Q6ZXC7	Q6ZXC7	Q6ZXC7_RAT	St8sia6	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6	1	HLALFWR	HLALFWR	2	HLALFWR2	10370.8	14182.9	9554.43
D4AB17	D4AB17	D4AB17_RAT	Pfas	phosphoribosylformylglycinamidine synthase	1	HLALMPHPER	HLALMPHPER	3	HLALMPHPER3	106984	38166.9	32186.4
B1WC43	B1WC43	B1WC43_RAT	Tmem41a	Transmembrane protein 41a	1	HLALSEASGK	HLALSEASGK	2	HLALSEASGK2	25785.1	26339.9	20139.7
F1MAA4	F1MAA4	F1MAA4_RAT	Atp13a2	ATPase cation transporting 13A2	1	HLALSGSTFAVLQK	HLALSGSTFAVLQK	3	HLALSGSTFAVLQK3	2747.42	3492.53	10282.3
F1M7Z1	F1M7Z1	F1M7Z1_RAT	Edc3	Enhancer of mRNA-decapping protein 3	1	HLANHDVQVILFLPNFVK	HLANHDVQVILFLPNFVK	3	HLANHDVQVILFLPNFVK3	15238.9	8394.56	6201.59
F1M7Z1	F1M7Z1	F1M7Z1_RAT	Edc3	Enhancer of mRNA-decapping protein 3	1	HLANHDVQVILFLPNFVK	HLANHDVQVILFLPNFVK	4	HLANHDVQVILFLPNFVK4	8494.73	7820.17	6767.72
D3ZJF9	D3ZJF9	D3ZJF9_RAT	Gla	Alpha-galactosidase	1	HLANYVHSK	HLANYVHSK	2	HLANYVHSK2	25393.5		16906.6
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	HLAPDYR	HLAPDYR	2	HLAPDYR2	293025	253776	284016
Q9Z311	Q9Z311	MECR_RAT	Mecr	Enoyl-[acyl-carrier-protein] reductase, mitochondrial	1	HLAPGGTMVTYGGMAK	HLAPGGTMVTYGGMAK	3	HLAPGGTMVTYGGMAK3	6495.78	4026.87	9739.35
Q9JLT6	Q9JLT6	BID_RAT	Bid	BH3-interacting domain death agonist	1	HLAQAGDELDHSIQPTLVR	HLAQAGDELDHSIQPTLVR	3	HLAQAGDELDHSIQPTLVR3	38494.3	29426.8	23505.2
Q9JLT6	Q9JLT6	BID_RAT	Bid	BH3-interacting domain death agonist	1	HLAQAGDELDHSIQPTLVR	HLAQAGDELDHSIQPTLVR	4	HLAQAGDELDHSIQPTLVR4	69948.5	53718.9	55088.5
B5DFI7	B5DFI7	B5DFI7_RAT	Qpctl	glutaminyl-peptide cyclotransferase	1	HLAQIMESIPHSPGPTR	HLAQIMESIPHSPGPTR	4	HLAQIMESIPHSPGPTR4	3907.73	6238.38	7555.35
A0A8I5Y8A9	A0A8I5Y8A9	A0A8I5Y8A9_RAT	Gltpd2	Glycolipid transfer protein domain containing 2	1	HLARPSGSQTLLLLHR	HLARPSGSQTLLLLHR	4	HLARPSGSQTLLLLHR4	20641.1	24167.4	19372.3
B2RYL4	B2RYL4	B2RYL4_RAT	Armc6	Armadillo repeat containing 6	1	HLASPQVCEQSCAALCVLALR	HLASPQVC(UniMod:4)EQSC(UniMod:4)AALC(UniMod:4)VLALR	3	HLASPQVC(UniMod:4)EQSC(UniMod:4)AALC(UniMod:4)VLALR3	3955.31	4549.05	2542.91
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	HLASQYWGGNR	HLASQYWGGNR	2	HLASQYWGGNR2	7446.29	14897.1	12264.6
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	HLASQYWGGNR	HLASQYWGGNR	3	HLASQYWGGNR3	34804.3	58371.4	49815.5
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	HLATGNYLAAELNPDYR	HLATGNYLAAELNPDYR	3	HLATGNYLAAELNPDYR3	11514.1	13088.2	15130.2
A0A8I6ANB2	A0A8I6ANB2	A0A8I6ANB2_RAT	Ppfibp1	PPFIA binding protein 1	1	HLATHFNLLIGAEAQHQK	HLATHFNLLIGAEAQHQK	4	HLATHFNLLIGAEAQHQK4	7709.72		1515.13
M0R4M1	M0R4M1	M0R4M1_RAT	Nlrc5	NLR family, CARD domain containing 5	1	HLATNLTLCPALEK	HLATNLTLC(UniMod:4)PALEK	3	HLATNLTLC(UniMod:4)PALEK3	4458.16		
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	HLAVPATQQLTVDR	HLAVPATQQLTVDR	2	HLAVPATQQLTVDR2	16319.9	10979	23790.1
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	HLAVPATQQLTVDR	HLAVPATQQLTVDR	3	HLAVPATQQLTVDR3	67870.6	70591.1	56064.7
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	HLCEIGTK	HLC(UniMod:4)EIGTK	1	HLC(UniMod:4)EIGTK1	4340.85		4218.89
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	HLCEIGTK	HLC(UniMod:4)EIGTK	2	HLC(UniMod:4)EIGTK2	118356	114108	57716.5
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	HLCELLAQQF	HLC(UniMod:4)ELLAQQF	2	HLC(UniMod:4)ELLAQQF2	33383.3	37703.1	42716
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	HLCISGTPK	HLC(UniMod:4)ISGTPK	2	HLC(UniMod:4)ISGTPK2	15418.8	10448.5	6754.74
F1LW91	F1LW91	F1LW91_RAT	Numa1	Nuclear mitotic apparatus protein 1	1	HLCQQLQAEQAAAEK	HLC(UniMod:4)QQLQAEQAAAEK	3	HLC(UniMod:4)QQLQAEQAAAEK3	9423.93		2401.61
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	HLCTNTWVHSTNIPIDKEEEKPVMLK	HLC(UniMod:4)TNTWVHSTNIPIDKEEEKPVMLK	4	HLC(UniMod:4)TNTWVHSTNIPIDKEEEKPVMLK4	3415.56		3736.91
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	HLCTNTWVTSTSIPIDTEEERPVMLK	HLC(UniMod:4)TNTWVTSTSIPIDTEEERPVMLK	4	HLC(UniMod:4)TNTWVTSTSIPIDTEEERPVMLK4	15670.3	12419.2	14111.8
P11505	Q64542;Q64568;P11505;P11506	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	0	HLDACETMGNATAICSDK	HLDAC(UniMod:4)ETMGNATAIC(UniMod:4)SDK	3	HLDAC(UniMod:4)ETMGNATAIC(UniMod:4)SDK3	8222.3	9632.35	8829.25
Q8K3X0	Q8K3X0	CASC3_RAT	Casc3	Protein CASC3	1	HLDDDEDRKNPAYIPR	HLDDDEDRKNPAYIPR	4	HLDDDEDRKNPAYIPR4	10367	5537.64	14686.3
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	HLDDQLDCSSLR	HLDDQLDC(UniMod:4)SSLR	3	HLDDQLDC(UniMod:4)SSLR3	6377.05	8666.88	12444.2
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	HLDFFEMLR	HLDFFEMLR	2	HLDFFEMLR2	29351.7	33553.8	42380.3
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	HLDFFEMLR	HLDFFEMLR	3	HLDFFEMLR3	4399.28	6172.95	2521.69
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	HLDFFEMLRNEDELEFAK	HLDFFEMLRNEDELEFAK	3	HLDFFEMLRNEDELEFAK3	14180.5		12630.1
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	HLDFFEMLRNEDELEFAK	HLDFFEMLRNEDELEFAK	4	HLDFFEMLRNEDELEFAK4	8381.23	2574.51	4326.15
O55145	O55145	X3CL1_RAT	Cx3cl1	Fractalkine	1	HLDHQTAALTR	HLDHQTAALTR	3	HLDHQTAALTR3	17499.6	26299.8	15012.4
P53534	P53534	PYGB_RAT	Pygb	Glycogen phosphorylase, brain form (Fragment)	1	HLDHVAALFPGDVDR	HLDHVAALFPGDVDR	3	HLDHVAALFPGDVDR3	53165.7	45300	44469.8
P53534	P53534	PYGB_RAT	Pygb	Glycogen phosphorylase, brain form (Fragment)	1	HLDHVAALFPGDVDR	HLDHVAALFPGDVDR	4	HLDHVAALFPGDVDR4	9501.85	4494.56	7545.68
Q9R080	Q9R080	GPSM1_RAT	Gpsm1	G-protein-signaling modulator 1	1	HLDIAQEQGDK	HLDIAQEQGDK	3	HLDIAQEQGDK3	4416.18		
D3ZRH1	D3ZRH1	D3ZRH1_RAT	Oxa1l	OXA1L, mitochondrial inner membrane protein	1	HLDLAAR	HLDLAAR	2	HLDLAAR2	8391.34		
Q9QZH7	Q9QZH7	FXL20_RAT	Fbxl20	F-box/LRR-repeat protein 20	1	HLDLASCTSITNMSLK	HLDLASC(UniMod:4)TSITNMSLK	3	HLDLASC(UniMod:4)TSITNMSLK3	5047.2	6643.25	7923.87
Q9QY17	Q9QY17	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	1	HLDLSNVASYK	HLDLSNVASYK	2	HLDLSNVASYK2	74238	60114.1	76632.5
Q9QY17	Q9QY17	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	1	HLDLSNVASYK	HLDLSNVASYK	3	HLDLSNVASYK3	35541.9	38973.2	51587.7
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	HLDNLLLTK	HLDNLLLTK	2	HLDNLLLTK2	3396.42	4421.12	7517.11
Q3ZAU6	Q3ZAU6	Q3ZAU6_RAT	Rnf14	RBR-type E3 ubiquitin transferase	1	HLDNLWEEHR	HLDNLWEEHR	3	HLDNLWEEHR3	7403.22		4701.39
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	HLDPSNDEK	HLDPSNDEK	2	HLDPSNDEK2			65515.7
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	HLDQVATAR	HLDQVATAR	2	HLDQVATAR2	56144.6	70474.7	55687.4
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	HLDRVDSILLTHIGDDNLPGINSMLQR	HLDRVDSILLTHIGDDNLPGINSMLQR	4	HLDRVDSILLTHIGDDNLPGINSMLQR4	4870.79	9603.47	2164.61
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	HLDSSSNERPDISSIQR	HLDSSSNERPDISSIQR	3	HLDSSSNERPDISSIQR3	142591	145299	115266
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	HLDSSSNERPDISSIQR	HLDSSSNERPDISSIQR	4	HLDSSSNERPDISSIQR4	70464	99697.8	85381.8
P35572	P35572	IBP6_RAT	Igfbp6	Insulin-like growth factor-binding protein 6	1	HLDSVLQQLQTEVFR	HLDSVLQQLQTEVFR	3	HLDSVLQQLQTEVFR3	9160.4	5783.67	5400.99
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	HLDSVLSDHTR	HLDSVLSDHTR	3	HLDSVLSDHTR3	66919.3	64980.7	48269.8
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	HLDVDLDR	HLDVDLDR	2	HLDVDLDR2	39128.1	36622.8	32800
Q5FVI3	A0A8I6AP35;Q5FVI3	LRC57_RAT	Lrrc57	Leucine-rich repeat-containing protein 57	0	HLDVVDLSK	HLDVVDLSK	2	HLDVVDLSK2	11777.9	9278.95	11304.7
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	HLDVVTCLALDTCGIYLISGSR	HLDVVTC(UniMod:4)LALDTC(UniMod:4)GIYLISGSR	3	HLDVVTC(UniMod:4)LALDTC(UniMod:4)GIYLISGSR3	7379.84	2651.7	10877.3
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	HLDYMQQDHDFLIFVK	HLDYMQQDHDFLIFVK	3	HLDYMQQDHDFLIFVK3	18955.3	40711	37877.7
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	HLDYMQQDHDFLIFVK	HLDYMQQDHDFLIFVK	4	HLDYMQQDHDFLIFVK4	4779.08	5998.73	4781.48
A0A8I5ZSB0	A0A8I5ZSB0	A0A8I5ZSB0_RAT	Igtp	Interferon gamma induced GTPase	1	HLEAAVSPPYDIADLER	HLEAAVSPPYDIADLER	3	HLEAAVSPPYDIADLER3	17615.4	25668.9	14371.5
B5DF45	B5DF45	TRAF6_RAT	Traf6	TNF receptor-associated factor 6	1	HLEDHQVHCEFALVICPQCQR	HLEDHQVHC(UniMod:4)EFALVIC(UniMod:4)PQC(UniMod:4)QR	4	HLEDHQVHC(UniMod:4)EFALVIC(UniMod:4)PQC(UniMod:4)QR4	11483.1	7069.14	1681.67
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	HLEDLVEK	HLEDLVEK	2	HLEDLVEK2	36800.3	43537.8	37419.3
B2RYD7	B2RYD7	B2RYD7_RAT	Stt3b	dolichyl-diphosphooligosaccharide--protein glycotransferase	1	HLEEAFTSEHWLVR	HLEEAFTSEHWLVR	2	HLEEAFTSEHWLVR2	1286.7	1334.91	
B2RYD7	B2RYD7	B2RYD7_RAT	Stt3b	dolichyl-diphosphooligosaccharide--protein glycotransferase	1	HLEEAFTSEHWLVR	HLEEAFTSEHWLVR	3	HLEEAFTSEHWLVR3	68654.3	72009.5	54779.1
B2RYD7	B2RYD7	B2RYD7_RAT	Stt3b	dolichyl-diphosphooligosaccharide--protein glycotransferase	1	HLEEAFTSEHWLVR	HLEEAFTSEHWLVR	4	HLEEAFTSEHWLVR4	2945.54	3313.08	5547.55
Q8R4Z9	Q8R4Z9	MFN1_RAT	Mfn1	Mitofusin-1	1	HLEEEIAR	HLEEEIAR	2	HLEEEIAR2	4889.55	6446.29	6685.73
F1LU71	F1LU71	AUHM_RAT	Auh	Methylglutaconyl-CoA hydratase, mitochondrial	1	HLEEENR	HLEEENR	2	HLEEENR2			14808.9
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	HLEEIVHVEQGR	HLEEIVHVEQGR	2	HLEEIVHVEQGR2	1134.66	2910.99	
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	HLEEIVHVEQGR	HLEEIVHVEQGR	3	HLEEIVHVEQGR3	50966.6	45432.9	31969.8
F7F5P9	F7F5P9	F7F5P9_RAT	G3bp2	G3BP stress granule assembly factor 2	1	HLEELEEK	HLEELEEK	2	HLEELEEK2	45394	55942.5	39325.1
Q8CJ99	Q8CJ99	SCLT1_RAT	Sclt1	Sodium channel and clathrin linker 1	1	HLEELNR	HLEELNR	2	HLEELNR2	57916		101399
Q5BJT7	Q5BJT7	CCD93_RAT	Ccdc93	Coiled-coil domain-containing protein 93	1	HLEELQANHTSLQAK	HLEELQANHTSLQAK	3	HLEELQANHTSLQAK3	5315.48	8198.49	
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	HLEFCYDLGK	HLEFC(UniMod:4)YDLGK	2	HLEFC(UniMod:4)YDLGK2	10748.8	13512	8084.82
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	HLEFMNQLK	HLEFMNQLK	2	HLEFMNQLK2	63264.8	25457.7	22247.5
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	HLEFMNQLK	HLEFMNQLK	3	HLEFMNQLK3		7425.73	7591.92
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	HLEFMNQLKK	HLEFMNQLKK	3	HLEFMNQLKK3	14191.6	18419.7	26052.6
Q3B7U1	Q3B7U1	Q3B7U1_RAT	Maged2	MAGE family member D2	1	HLEGEEDGNSDQSQTSETTGGR	HLEGEEDGNSDQSQTSETTGGR	3	HLEGEEDGNSDQSQTSETTGGR3	4426.26	2123.2	593.549
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	HLEGNELQR	HLEGNELQR	2	HLEGNELQR2	56323.8	59692.5	53224.2
B2RZ68	B2RZ68	B2RZ68_RAT	Dcaf7	DDB1 and CUL4 associated factor 7	1	HLEHSTIIYEDPQHHPLLR	HLEHSTIIYEDPQHHPLLR	4	HLEHSTIIYEDPQHHPLLR4	10533.9	20215.1	15476.6
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	HLEIFHTEFQNLLDADK	HLEIFHTEFQNLLDADK	3	HLEIFHTEFQNLLDADK3	22314.8	24444.1	20987.5
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	HLEIFHTEFQNLLDADK	HLEIFHTEFQNLLDADK	4	HLEIFHTEFQNLLDADK4	11497.9	19324.3	8150.3
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	HLEIFHTEFQNLLDADKNEDLGR	HLEIFHTEFQNLLDADKNEDLGR	4	HLEIFHTEFQNLLDADKNEDLGR4	7052.95	5720.76	5219.53
P53534	P53534	PYGB_RAT	Pygb	Glycogen phosphorylase, brain form (Fragment)	1	HLEIIYAINQR	HLEIIYAINQR	3	HLEIIYAINQR3		5622.48	13063.7
P0CC10	P0CC10	LRC4B_RAT	Lrrc4b	Leucine-rich repeat-containing protein 4B	1	HLEILQLSK	HLEILQLSK	2	HLEILQLSK2	8504.23	6269.16	5998.93
P34058	P34058;A0A8I5ZRY7	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	HLEINPDHPIVETLR	HLEINPDHPIVETLR	2	HLEINPDHPIVETLR2	49076.4	33760.7	41853.5
P34058	P34058;A0A8I5ZRY7	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	HLEINPDHPIVETLR	HLEINPDHPIVETLR	3	HLEINPDHPIVETLR3	2.4548e+06	2.55114e+06	2.31145e+06
P34058	P34058;A0A8I5ZRY7	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	HLEINPDHPIVETLR	HLEINPDHPIVETLR	4	HLEINPDHPIVETLR4	1.0846e+06	1.16383e+06	1.08675e+06
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	HLEINPDHSIIETLR	HLEINPDHSIIETLR	2	HLEINPDHSIIETLR2	65125.5	49023.2	42369.2
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	HLEINPDHSIIETLR	HLEINPDHSIIETLR	3	HLEINPDHSIIETLR3	769049	707251	771433
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	HLEINPDHSIIETLR	HLEINPDHSIIETLR	4	HLEINPDHSIIETLR4	476363	433964	420249
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	HLEKEEYISR	HLEKEEYISR	3	HLEKEEYISR3	7132.92	6678.27	15774.7
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	HLELAVPVILR	HLELAVPVILR	2	HLELAVPVILR2	55245	111608	64260.3
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	HLELAVPVILR	HLELAVPVILR	3	HLELAVPVILR3	96676.1	131198	60583.7
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	HLELEWTVGPIPVK	HLELEWTVGPIPVK	2	HLELEWTVGPIPVK2	3207.08	1191	1577.18
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	HLELEWTVGPIPVK	HLELEWTVGPIPVK	3	HLELEWTVGPIPVK3	7311.35	8554.46	5545.76
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	HLELGKK	HLELGKK	2	HLELGKK2			3339.97
D3ZHK4	D3ZHK4	D3ZHK4_RAT	Rb1cc1	RB1-inducible coiled-coil 1	1	HLENQIAK	HLENQIAK	2	HLENQIAK2		4470.61	5110.7
Q91Y78	Q91Y78	UCHL3_RAT	Uchl3	Ubiquitin carboxyl-terminal hydrolase isozyme L3	1	HLENYDAIR	HLENYDAIR	2	HLENYDAIR2	17146.2	13039.5	7273.39
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	HLEPALAFQLELNR	HLEPALAFQLELNR	3	HLEPALAFQLELNR3	5182.13	6539.69	7287.79
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	HLEQFATEGLR	HLEQFATEGLR	3	HLEQFATEGLR3	44803.2	53510.2	54569.8
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	HLESHELLLDCYDK	HLESHELLLDC(UniMod:4)YDK	3	HLESHELLLDC(UniMod:4)YDK3	3191.03	1400.56	6908.54
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	HLESHELLLDCYDKEIMDILNER	HLESHELLLDC(UniMod:4)YDKEIMDILNER	4	HLESHELLLDC(UniMod:4)YDKEIMDILNER4		11002.3	
Q5PQN6	Q5PQN6	SPE39_RAT	Vipas39	Spermatogenesis-defective protein 39 homolog	1	HLESSGQTEIFR	HLESSGQTEIFR	3	HLESSGQTEIFR3	7041.92	4876.32	5924.07
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	HLETLIR	HLETLIR	2	HLETLIR2	108791	96964.5	116765
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	HLEVNVWIIEPQGMR	HLEVNVWIIEPQGMR	2	HLEVNVWIIEPQGMR2	490000	572770	392229
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	HLEVNVWIIEPQGMR	HLEVNVWIIEPQGMR	3	HLEVNVWIIEPQGMR3	4.96235e+06	2.98533e+06	1.75041e+06
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	HLEVNVWIIEPQGMR	HLEVNVWIIEPQGMR	4	HLEVNVWIIEPQGMR4	129468	191908	147324
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	HLEVSSASMAEDLCR	HLEVSSASMAEDLC(UniMod:4)R	3	HLEVSSASMAEDLC(UniMod:4)R3	6112.98		10467.4
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	HLEVSSASMAEDLCRK	HLEVSSASMAEDLC(UniMod:4)RK	3	HLEVSSASMAEDLC(UniMod:4)RK3	1737.01	4107.97	4667.77
M0R5K1	M0R5K1	M0R5K1_RAT	AABR07065812.2	Immunoglobulin heavy variable V12-3	1	HLEWMGYMTYSGETFYNPSLK	HLEWMGYMTYSGETFYNPSLK	3	HLEWMGYMTYSGETFYNPSLK3	10291.3	10304.2	3239.06
Q505J9	Q505J9	ATAD1_RAT	Atad1	Outer mitochondrial transmembrane helix translocase	1	HLFENSR	HLFENSR	2	HLFENSR2	48456.5	48627.5	43889.2
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	HLFETDVQNNK	HLFETDVQNNK	2	HLFETDVQNNK2	8078.17		7459.8
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	HLFETDVQNNK	HLFETDVQNNK	3	HLFETDVQNNK3	18936	18658.7	24483.3
D4A5Q2	D4A5Q2	D4A5Q2_RAT	Smc2	Structural maintenance of chromosomes protein	1	HLFGQPNSAYDFK	HLFGQPNSAYDFK	3	HLFGQPNSAYDFK3	3050.87		
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	HLFLDLPK	HLFLDLPK	2	HLFLDLPK2	24201	18252.1	12320.4
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	HLFPIQVIK	HLFPIQVIK	2	HLFPIQVIK2	8492.63	6617.08	15390
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	HLFQLCICQTLHEK	HLFQLC(UniMod:4)IC(UniMod:4)QTLHEK	3	HLFQLC(UniMod:4)IC(UniMod:4)QTLHEK3		12401.6	
Q3B7T9	Q3B7T9	RFIP1_RAT	Rab11fip1	Rab11 family-interacting protein 1	1	HLFSSTENLAAR	HLFSSTENLAAR	3	HLFSSTENLAAR3	9078.35	6809.17	6661.96
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	HLFSTIPELINYHQHNSAGLISR	HLFSTIPELINYHQHNSAGLISR	3	HLFSTIPELINYHQHNSAGLISR3	12830.4		6414.16
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	HLFSTIPELINYHQHNSAGLISR	HLFSTIPELINYHQHNSAGLISR	4	HLFSTIPELINYHQHNSAGLISR4	70519.5	73926.6	65992.6
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	HLGATYESGSR	HLGATYESGSR	2	HLGATYESGSR2	116579	119859	108498
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	HLGATYESGSR	HLGATYESGSR	3	HLGATYESGSR3	59929.4	74094.6	88679.7
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	HLGCGYYLTLVK	HLGC(UniMod:4)GYYLTLVK	3	HLGC(UniMod:4)GYYLTLVK3	4013.23	8137.15	9173.78
A0A8I6ACY0	A0A8I6ACY0	A0A8I6ACY0_RAT	Dennd2d	DENN domain containing 2D	1	HLGDDYEPTITYQFPK	HLGDDYEPTITYQFPK	3	HLGDDYEPTITYQFPK3	3636.05		3210.54
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	HLGEELQGYWDK	HLGEELQGYWDK	2	HLGEELQGYWDK2	5098	1325.44	
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	HLGEELQGYWDK	HLGEELQGYWDK	3	HLGEELQGYWDK3	18807.7	8861.63	11773.4
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	HLGEELQGYWDKEVLR	HLGEELQGYWDKEVLR	3	HLGEELQGYWDKEVLR3	32965.3	61317.6	43078.7
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	HLGEELQGYWDKEVLR	HLGEELQGYWDKEVLR	4	HLGEELQGYWDKEVLR4	7599.63	8821.22	8244.84
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	HLGGSGSVVPGSPSLDR	HLGGSGSVVPGSPSLDR	3	HLGGSGSVVPGSPSLDR3	20001.1	14223.6	16003.7
P13086	P13086	SUCA_RAT	Suclg1	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial	1	HLGLPVFNTVK	HLGLPVFNTVK	2	HLGLPVFNTVK2	148000	143810	165971
P13086	P13086	SUCA_RAT	Suclg1	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial	1	HLGLPVFNTVK	HLGLPVFNTVK	3	HLGLPVFNTVK3	270321	262168	361899
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	HLGNDEVHIVWSEHTR	HLGNDEVHIVWSEHTR	4	HLGNDEVHIVWSEHTR4	2947.22	1227.69	7980.21
P01048	P08932;A0A0G2KA54;P01048	KNT1_RAT	Map1	T-kininogen 1	0	HLGQSLNCNANVYMR	HLGQSLNC(UniMod:4)NANVYMR	2	HLGQSLNC(UniMod:4)NANVYMR2	4975.52	1615.78	3004.33
P01048	P08932;A0A0G2KA54;P01048	KNT1_RAT	Map1	T-kininogen 1	0	HLGQSLNCNANVYMR	HLGQSLNC(UniMod:4)NANVYMR	3	HLGQSLNC(UniMod:4)NANVYMR3	36050.1	41468.8	27364.1
P01048	P08932;A0A0G2KA54;P01048	KNT1_RAT	Map1	T-kininogen 1	0	HLGQSLNCNANVYMRPWENK	HLGQSLNC(UniMod:4)NANVYMRPWENK	3	HLGQSLNC(UniMod:4)NANVYMRPWENK3	96635.9	85792.2	90962.6
P01048	P08932;A0A0G2KA54;P01048	KNT1_RAT	Map1	T-kininogen 1	0	HLGQSLNCNANVYMRPWENK	HLGQSLNC(UniMod:4)NANVYMRPWENK	4	HLGQSLNC(UniMod:4)NANVYMRPWENK4	350099	374917	356141
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	HLGSSDTFSTHMALTGK	HLGSSDTFSTHMALTGK	3	HLGSSDTFSTHMALTGK3	4905.66	7397.87	
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	HLGTEDIISTK	HLGTEDIISTK	2	HLGTEDIISTK2	5951.35	3572.12	
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	HLGTEIQNTMYNIR	HLGTEIQNTMYNIR	3	HLGTEIQNTMYNIR3	12285.4	10993.9	18784.2
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	HLGTLNFGGIR	HLGTLNFGGIR	2	HLGTLNFGGIR2	24601.9	36096.7	29549.7
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	HLGTLNFGGIR	HLGTLNFGGIR	3	HLGTLNFGGIR3	75335.7	82249.6	60869.1
A0A8I5ZQ92;Q566E4	Q566E4;A0A8I5ZQ92	A0A8I5ZQ92_RAT;Q566E4_RAT	Hnrnpr;Hnrnpr-ps2	Heterogeneous nuclear ribonucleoprotein R-like	0	HLGVCISVANNR	HLGVC(UniMod:4)ISVANNR	3	HLGVC(UniMod:4)ISVANNR3			5837.52
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	HLGWLAEK	HLGWLAEK	2	HLGWLAEK2	66950.5	79348.6	65447.7
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	HLGWLAEKVPGESEK	HLGWLAEKVPGESEK	3	HLGWLAEKVPGESEK3		11582.9	12253.3
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	HLGYKPEEYK	HLGYKPEEYK	2	HLGYKPEEYK2	10105.6	13843.6	15331.3
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	HLGYKPEEYK	HLGYKPEEYK	3	HLGYKPEEYK3	259927	307505	273928
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	HLGYTLCK	HLGYTLC(UniMod:4)K	2	HLGYTLC(UniMod:4)K2	9907.74	13481	13369.1
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	HLHEIQSGR	HLHEIQSGR	2	HLHEIQSGR2			16285.3
D3ZX21	D3ZX21	D3ZX21_RAT	Ap4e1	AP-4 complex subunit epsilon	1	HLHENEELMK	HLHENEELMK	3	HLHENEELMK3	2867.51	3231.28	4964.41
P09811	P53534;P09811;P09812	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	0	HLHFTLVK	HLHFTLVK	2	HLHFTLVK2		8923.46	
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	HLHHNAGIMR	HLHHNAGIMR	2	HLHHNAGIMR2			3370.83
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	HLHHNAGIMR	HLHHNAGIMR	3	HLHHNAGIMR3			10023
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	HLHNFEATHCTPLPAQHFQMPWCL	HLHNFEATHC(UniMod:4)TPLPAQHFQMPWC(UniMod:4)L	4	HLHNFEATHC(UniMod:4)TPLPAQHFQMPWC(UniMod:4)L4	18520.8	5043.1	13582.2
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	HLHSTHSELLEDYYQSGR	HLHSTHSELLEDYYQSGR	3	HLHSTHSELLEDYYQSGR3	9799.61	7506.26	10067
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	HLHSTHSELLEDYYQSGR	HLHSTHSELLEDYYQSGR	4	HLHSTHSELLEDYYQSGR4	69440.6	63665.6	68399.4
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	HLHTAMFTISSDQR	HLHTAMFTISSDQR	3	HLHTAMFTISSDQR3	7782.72	9310.54	10399
D3ZAI6	D3ZAI6	D3ZAI6_RAT	Nt5dc3	5'-nucleotidase domain containing 3	1	HLHTLIFNAAR	HLHTLIFNAAR	3	HLHTLIFNAAR3	8738.97	13932.9	19359.8
Q641Z6	Q641Z6	EHD1_RAT	Ehd1	EH domain-containing protein 1	1	HLIEQDFPGMR	HLIEQDFPGMR	2	HLIEQDFPGMR2	5210.4	9535.99	
Q641Z6	Q641Z6	EHD1_RAT	Ehd1	EH domain-containing protein 1	1	HLIEQDFPGMR	HLIEQDFPGMR	3	HLIEQDFPGMR3	22021.1	22190.1	25776.4
Q5HZX7	Q5HZX7	LDAH_RAT	Ldah	Lipid droplet-associated hydrolase	1	HLIFVIPGNPGLSPFYVPFAK	HLIFVIPGNPGLSPFYVPFAK	3	HLIFVIPGNPGLSPFYVPFAK3	2794.49	1479.83	2288.33
P70541	P70541	EI2BG_RAT	Eif2b3	Translation initiation factor eIF-2B subunit gamma	1	HLIGADSLIGSDTQVGEK	HLIGADSLIGSDTQVGEK	3	HLIGADSLIGSDTQVGEK3	42475	26106.5	34532.1
A0A8I6A9E8	A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	1	HLIGGLDDVSNK	HLIGGLDDVSNK	2	HLIGGLDDVSNK2	5481.77	5043.57	1690.93
A0A8I6A9E8	A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	1	HLIGGLDDVSNK	HLIGGLDDVSNK	3	HLIGGLDDVSNK3	14293.4	4908.15	9632.31
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	HLIIENFIPLEEK	HLIIENFIPLEEK	2	HLIIENFIPLEEK2	5272.49	5948.14	8361.14
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	HLIIENFIPLEEK	HLIIENFIPLEEK	3	HLIIENFIPLEEK3	21438.9	19259.5	15869.2
P35435	P35435	ATPG_RAT	Atp5f1c	ATP synthase subunit gamma, mitochondrial	1	HLIIGVSSDR	HLIIGVSSDR	2	HLIIGVSSDR2	399703	365558	452787
M0RBP3	M0RBP3	M0RBP3_RAT	Nxpe1	Neurexophilin and PC-esterase domain family, member 1	1	HLILDAER	HLILDAER	2	HLILDAER2	3982.26	6301.31	5951.51
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	HLILLIK	HLILLIK	2	HLILLIK2	11939.9	13270.8	10193.2
A0A8I6ADA8	A0A8I6ADA8	A0A8I6ADA8_RAT	Abhd4	Abhydrolase domain containing 4, N-acyl phospholipase B	1	HLILVDPWGFPLRPTDPSEIR	HLILVDPWGFPLRPTDPSEIR	3	HLILVDPWGFPLRPTDPSEIR3	18658.8	31369.3	34102.9
A0A8I6ADA8	A0A8I6ADA8	A0A8I6ADA8_RAT	Abhd4	Abhydrolase domain containing 4, N-acyl phospholipase B	1	HLILVDPWGFPLRPTDPSEIR	HLILVDPWGFPLRPTDPSEIR	4	HLILVDPWGFPLRPTDPSEIR4	53039	46113.8	59496.1
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	HLIPAANTGESK	HLIPAANTGESK	2	HLIPAANTGESK2	3.43304e+06	3.39928e+06	3.19013e+06
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	HLIPAANTGESK	HLIPAANTGESK	3	HLIPAANTGESK3	1.40187e+06	1.42313e+06	1.44281e+06
Q8CJB9	D3ZYQ9;Q8CJB9	BRE1B_RAT	Rnf40	E3 ubiquitin-protein ligase BRE1B	0	HLISSLQNHNHQLK	HLISSLQNHNHQLK	4	HLISSLQNHNHQLK4	13624.3	8785.09	8908.24
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	HLIVLINK	HLIVLINK	2	HLIVLINK2	206973	221133	217412
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	HLIVSTDGR	HLIVSTDGR	2	HLIVSTDGR2	19928.8	40954.4	25079.8
P52632	P52632	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	1	HLKPHWNDGAILGFVNK	HLKPHWNDGAILGFVNK	4	HLKPHWNDGAILGFVNK4	49603	34135.6	52959.8
D3ZUX7	D3ZUX7	D3ZUX7_RAT	Acsf3	Acyl-CoA synthetase family member 3	1	HLLAHPSITDVAVIGVPDMTWGQR	HLLAHPSITDVAVIGVPDMTWGQR	3	HLLAHPSITDVAVIGVPDMTWGQR3	6680.06	6790.04	4757.15
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	HLLDNDGK	HLLDNDGK	2	HLLDNDGK2	24232.1	13922.1	23640.8
A0A8I6A5W7	A0A8I6A5W7	A0A8I6A5W7_RAT	Ccdc88a	Coiled coil domain containing 88A	1	HLLDQIQTLMLQNR	HLLDQIQTLMLQNR	3	HLLDQIQTLMLQNR3	6772.49	1501.55	2180.82
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	HLLEVEDLLQK	HLLEVEDLLQK	2	HLLEVEDLLQK2	22457.4	27290.9	25477.1
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	HLLEVEDLLQK	HLLEVEDLLQK	3	HLLEVEDLLQK3	32489.4	43647.7	44346.6
Q9Z1N3	Q9Z1N3	MYO9A_RAT	Myo9a	Unconventional myosin-IXa	1	HLLEVNSLK	HLLEVNSLK	2	HLLEVNSLK2	2460.1	3235.15	
Q6IV57	Q6IV57	RN141_RAT	Rnf141	RING finger protein 141	1	HLLFEVQPGSDSSAFWK	HLLFEVQPGSDSSAFWK	3	HLLFEVQPGSDSSAFWK3	3959.69	4793.72	5961.69
P07633	P07633	PCCB_RAT	Pccb	Propionyl-CoA carboxylase beta chain, mitochondrial	1	HLLGDTNYAWPTAEIAVMGAK	HLLGDTNYAWPTAEIAVMGAK	3	HLLGDTNYAWPTAEIAVMGAK3	16098.8	25252.9	28289.9
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	HLLGVEDLLQK	HLLGVEDLLQK	2	HLLGVEDLLQK2	354687	291250	303401
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	HLLGVEDLLQK	HLLGVEDLLQK	3	HLLGVEDLLQK3	310580	345754	393022
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	HLLIGLPSGAILSLPK	HLLIGLPSGAILSLPK	2	HLLIGLPSGAILSLPK2	23479.4	14253.4	11436.6
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	HLLIGLPSGAILSLPK	HLLIGLPSGAILSLPK	3	HLLIGLPSGAILSLPK3	174564	111828	119961
A0A8I5ZXZ9	A0A8I5ZXZ9	A0A8I5ZXZ9_RAT	Cars2	cysteine--tRNA ligase	1	HLLLGLASFVEDAR	HLLLGLASFVEDAR	3	HLLLGLASFVEDAR3	3689.97	3744.88	2979.23
A0JPJ7	A0JPJ7	OLA1_RAT	Ola1	Obg-like ATPase 1	1	HLLLTSK	HLLLTSK	2	HLLLTSK2	3280.4	5209.9	
Q5M824	O70142;Q5M824	SHC1_RAT	Shc1	SHC-transforming protein 1	0	HLLLVDPEGVVR	HLLLVDPEGVVR	2	HLLLVDPEGVVR2	6362.36	2793.37	
Q5M824	O70142;Q5M824	SHC1_RAT	Shc1	SHC-transforming protein 1	0	HLLLVDPEGVVR	HLLLVDPEGVVR	3	HLLLVDPEGVVR3	18488	18435.7	17610.9
F1M8V2	F1M8V2	F1M8V2_RAT	Ube4b	Ubiquitin conjugation factor E4	1	HLLNSPTDPFNR	HLLNSPTDPFNR	3	HLLNSPTDPFNR3	15345	22165.7	9857.92
P38062	P38062	MAP2_RAT	Metap2	Methionine aminopeptidase 2	1	HLLNVINENFGTLAFCR	HLLNVINENFGTLAFC(UniMod:4)R	3	HLLNVINENFGTLAFC(UniMod:4)R3	15249.5	10192.3	6106.5
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	HLLNYAYNSNINVPNAEVLLNNEIDWLKR	HLLNYAYNSNINVPNAEVLLNNEIDWLKR	4	HLLNYAYNSNINVPNAEVLLNNEIDWLKR4	23604.6	26309	21034.9
A0A0G2K687	A0A0G2K687	A0A0G2K687_RAT	Rubcn	Rubicon autophagy regulator	1	HLLPAYQETEHGSFR	HLLPAYQETEHGSFR	3	HLLPAYQETEHGSFR3	12458.1	13105.6	11486.7
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	HLLPCVIHAAVLK	HLLPC(UniMod:4)VIHAAVLK	2	HLLPC(UniMod:4)VIHAAVLK2	5688.57	3792.54	3422.07
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	HLLPCVIHAAVLK	HLLPC(UniMod:4)VIHAAVLK	3	HLLPC(UniMod:4)VIHAAVLK3	79252.8	62295.4	61879.3
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	HLLPVETQR	HLLPVETQR	2	HLLPVETQR2	213431	228991	178845
D3ZCT7	D3ZCT7	D3ZCT7_RAT	Sec23b	Protein transport protein SEC23	1	HLLQAPLDDAQEILQAR	HLLQAPLDDAQEILQAR	2	HLLQAPLDDAQEILQAR2	5405.23	3761.95	
D3ZCT7	D3ZCT7	D3ZCT7_RAT	Sec23b	Protein transport protein SEC23	1	HLLQAPLDDAQEILQAR	HLLQAPLDDAQEILQAR	3	HLLQAPLDDAQEILQAR3	9661.77	6642.88	9606.87
B5DFC3	B5DFC3	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	1	HLLQAPVDDAQEILHSR	HLLQAPVDDAQEILHSR	3	HLLQAPVDDAQEILHSR3	37847.4	15532.2	15252.9
B5DFC3	B5DFC3	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	1	HLLQAPVDDAQEILHSR	HLLQAPVDDAQEILHSR	4	HLLQAPVDDAQEILHSR4	7702.65	6201.04	7274.04
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	HLLQGFR	HLLQGFR	2	HLLQGFR2	91683.1	199467	1.53769e+07
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	HLLQIAQQDIQPLFK	HLLQIAQQDIQPLFK	2	HLLQIAQQDIQPLFK2	9960.2	13224.7	13947.1
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	HLLQIAQQDIQPLFK	HLLQIAQQDIQPLFK	3	HLLQIAQQDIQPLFK3	193440	154474	184338
Q8VII0	Q8VII0	FRMD6_RAT	Frmd6	FERM domain-containing protein 6 (Fragment)	1	HLLQLLSNSHR	HLLQLLSNSHR	3	HLLQLLSNSHR3	18302.8	13832.2	10553.2
Q8R4A1	Q8R4A1	ERO1A_RAT	Ero1a	ERO1-like protein alpha	1	HLLQNVH	HLLQNVH	2	HLLQNVH2	31693.7	31113	31831.8
A0A0G2JUT7	A0A0G2JUT7	A0A0G2JUT7_RAT	B3glct	Beta 3-glucosyltransferase	1	HLLSCYDSSDPVFLGER	HLLSC(UniMod:4)YDSSDPVFLGER	3	HLLSC(UniMod:4)YDSSDPVFLGER3	2549.47	2900.4	
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	HLLSDQTDPFNR	HLLSDQTDPFNR	2	HLLSDQTDPFNR2	34309.6	25051.9	23432
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	HLLSDQTDPFNR	HLLSDQTDPFNR	3	HLLSDQTDPFNR3	97311.7	123902	105797
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	HLLSPQR	HLLSPQR	2	HLLSPQR2	29466.4	27309.8	51500.8
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	HLLSTDDQGLSSSK	HLLSTDDQGLSSSK	3	HLLSTDDQGLSSSK3	16009.7	13937.8	8466.94
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	HLLTVLLK	HLLTVLLK	2	HLLTVLLK2	8141.46	4707.16	4110.17
D3Z9Y3	D3Z9Y3	D3Z9Y3_RAT	Cerk	Ceramide kinase	1	HLLVFINPFGGK	HLLVFINPFGGK	3	HLLVFINPFGGK3	4606.39	10722.2	7925.01
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	HLLVHAPEDK	HLLVHAPEDK	3	HLLVHAPEDK3	80801.8	58979.4	66247.7
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	HLLVHAPEDKK	HLLVHAPEDKK	3	HLLVHAPEDKK3	9798.86		
A0A8I6GBD2	A0A8I6GBD2	A0A8I6GBD2_RAT	Actr10	Actin related protein 10	1	HLLVNPR	HLLVNPR	2	HLLVNPR2	122245	87236.1	86962.4
P37199	P37199	NU155_RAT	Nup155	Nuclear pore complex protein Nup155	1	HLLVSNVGGDGEEIER	HLLVSNVGGDGEEIER	3	HLLVSNVGGDGEEIER3		4453.52	
A0A0G2K189	A0A0G2K189	A0A0G2K189_RAT	Scrn3	Secernin 3	1	HLLYQNHQQALEMISNHK	HLLYQNHQQALEMISNHK	4	HLLYQNHQQALEMISNHK4	4129.06	5005.2	7357.07
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	HLLYQVVR	HLLYQVVR	2	HLLYQVVR2	105128	124044	87662.5
D3ZLM5	D3ZLM5	D3ZLM5_RAT	Nhlrc2	NHL repeat containing 2	1	HLLYVADSYNHK	HLLYVADSYNHK	3	HLLYVADSYNHK3	14037.7	9499.66	8458.43
A0A0G2JUU7	A0A0G2JUU7	A0A0G2JUU7_RAT	Tubgcp3	Gamma-tubulin complex component	1	HLMDLLKPELVR	HLMDLLKPELVR	3	HLMDLLKPELVR3	10557.3	2761.67	
G3V6N7	G3V6N7	G3V6N7_RAT	Slc12a6	Solute carrier family 12, member 6	1	HLMEAEK	HLMEAEK	2	HLMEAEK2	7871.44	4058.09	11794.2
Q63450	Q63450	KCC1A_RAT	Camk1	Calcium/calmodulin-dependent protein kinase type 1	1	HLMEKDPEK	HLMEKDPEK	2	HLMEKDPEK2			3310.31
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	HLMHLELDISDSK	HLMHLELDISDSK	3	HLMHLELDISDSK3	2979.48	1155.31	5654.78
A0A8I5ZTN5	A0A8I5ZTN5	A0A8I5ZTN5_RAT	Adsl	Adenylosuccinate lyase	1	HLMSLTMDPLQTASVQWFER	HLMSLTMDPLQTASVQWFER	3	HLMSLTMDPLQTASVQWFER3	10498.2	11147.7	
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	HLMTSEIHNTVK	HLMTSEIHNTVK	2	HLMTSEIHNTVK2	2436.79		
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	HLMTSEIHNTVK	HLMTSEIHNTVK	3	HLMTSEIHNTVK3	12380.2	8359.72	9954.46
Q641Z9	Q641Z9	Q641Z9_RAT	Sdhc	Succinate dehydrogenase cytochrome b560 subunit, mitochondrial	1	HLMWDLGK	HLMWDLGK	2	HLMWDLGK2	32215.1	33146.3	29453.5
Q5FVJ0	Q5FVJ0	RUFY3_RAT	Rufy3	Protein RUFY3	1	HLNATVNNLQAK	HLNATVNNLQAK	3	HLNATVNNLQAK3	3802.13	4016.47	3973.21
P41350	P41350	CAV1_RAT	Cav1	Caveolin-1	1	HLNDDVVK	HLNDDVVK	2	HLNDDVVK2	9470.82	9443.21	8258.95
P13721	P13721	SIAT1_RAT	St6gal1	Beta-galactoside alpha-2,6-sialyltransferase 1	1	HLNEGTDEDIYLFGK	HLNEGTDEDIYLFGK	3	HLNEGTDEDIYLFGK3		3541.49	2554.94
P83868	P83868	TEBP_RAT	Ptges3	Prostaglandin E synthase 3	1	HLNEIDLFHCIDPNDSK	HLNEIDLFHC(UniMod:4)IDPNDSK	3	HLNEIDLFHC(UniMod:4)IDPNDSK3	1.11355e+06	841745	887242
P83868	P83868	TEBP_RAT	Ptges3	Prostaglandin E synthase 3	1	HLNEIDLFHCIDPNDSK	HLNEIDLFHC(UniMod:4)IDPNDSK	4	HLNEIDLFHC(UniMod:4)IDPNDSK4	486569	432079	394606
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	HLNHDYMK	HLNHDYMK	2	HLNHDYMK2	8194.54		9441.98
Q68FX0	Q68FX0	IDH3B_RAT	Idh3B	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	HLNLEYHSSMIADAVK	HLNLEYHSSMIADAVK	3	HLNLEYHSSMIADAVK3	9482.93	11584.4	19453.1
Q68FX0	Q68FX0	IDH3B_RAT	Idh3B	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	HLNLEYHSSMIADAVKK	HLNLEYHSSMIADAVKK	4	HLNLEYHSSMIADAVKK4	7134.17	13428.2	17776.6
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	HLNLFLTPGLLEAETMR	HLNLFLTPGLLEAETMR	3	HLNLFLTPGLLEAETMR3	9404.69	9826.59	14450
D4A8F2	D4A8F2	D4A8F2_RAT	Rsu1	Ras suppressor protein 1	1	HLNLGMNR	HLNLGMNR	2	HLNLGMNR2	653010	636820	552957
P49911	P49911	AN32A_RAT	Anp32a	Acidic leucine-rich nuclear phosphoprotein 32 family member A	1	HLNLSGNK	HLNLSGNK	2	HLNLSGNK2	2867.21		
A0A8I6ASZ5	A0A8I6ASZ5	A0A8I6ASZ5_RAT	Tcf25	Transcription factor 25	1	HLNPDTELKR	HLNPDTELKR	3	HLNPDTELKR3		5978.11	
Q5FVC7	Q5FVC7	ACAP2_RAT	Acap2	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2	1	HLNPGLQLYR	HLNPGLQLYR	2	HLNPGLQLYR2	12883.4	9186.59	9364.17
Q5FVC7	Q5FVC7	ACAP2_RAT	Acap2	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2	1	HLNPGLQLYR	HLNPGLQLYR	3	HLNPGLQLYR3	15341.6	12823.2	
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	HLNSHMNALHQGMQANR	HLNSHMNALHQGMQANR	3	HLNSHMNALHQGMQANR3	19611.1	15353.9	7045.05
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	HLNSHMNALHQGMQANR	HLNSHMNALHQGMQANR	4	HLNSHMNALHQGMQANR4	122989	97514	102656
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	HLNTEQFLPNLGSTVPGENYFDR	HLNTEQFLPNLGSTVPGENYFDR	3	HLNTEQFLPNLGSTVPGENYFDR3	23730.9	30525	31560
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	HLNTINIR	HLNTINIR	2	HLNTINIR2	14242.9	21960.8	21333.2
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	HLNTIQK	HLNTIQK	2	HLNTIQK2	8464.68		10467.5
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	HLNYVEFTQFLQELQLEHAR	HLNYVEFTQFLQELQLEHAR	3	HLNYVEFTQFLQELQLEHAR3	23895.3	18141.5	13571.2
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	HLNYVEFTQFLQELQLEHAR	HLNYVEFTQFLQELQLEHAR	4	HLNYVEFTQFLQELQLEHAR4	5643.97	6000.83	4850.32
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	HLPASVTEFQPALR	HLPASVTEFQPALR	3	HLPASVTEFQPALR3	27655.3	36253.3	32683.7
Q6IE70	Q6IE70	PAN2_RAT	Pan2	PAN2-PAN3 deadenylation complex catalytic subunit Pan2	1	HLPDILVINCEVNSSK	HLPDILVINC(UniMod:4)EVNSSK	3	HLPDILVINC(UniMod:4)EVNSSK3	6244.13	7933.22	4124.59
Q4KLY7	Q4KLY7	Q4KLY7_RAT	Syngr4	Synaptogyrin	1	HLPESLQDLADSETVR	HLPESLQDLADSETVR	3	HLPESLQDLADSETVR3	2959.96		4139.92
Q562B5	Q562B5	PGAM5_RAT	Pgam5	Serine/threonine-protein phosphatase PGAM5, mitochondrial	1	HLPGVCR	HLPGVC(UniMod:4)R	2	HLPGVC(UniMod:4)R2	65761.9		63895.8
Q8VHF5	Q8VHF5	CISY_RAT	Cs	Citrate synthase, mitochondrial	1	HLPKDPMFK	HLPKDPMFK	2	HLPKDPMFK2	32328.2	17930.8	18470.8
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	HLPNNEYIDRVEIAGPGFINVHLR	HLPNNEYIDRVEIAGPGFINVHLR	4	HLPNNEYIDRVEIAGPGFINVHLR4	4380.99	5923.24	13832
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	HLPPLGLEGSTSFAELLFR	HLPPLGLEGSTSFAELLFR	3	HLPPLGLEGSTSFAELLFR3	3614.43	2706.28	4132.45
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	HLPSIPDKGFTDK	HLPSIPDKGFTDK	3	HLPSIPDKGFTDK3	27637	15383.3	25633.5
D4A962	D4A962	D4A962_RAT	Hnrnpul1	Heterogeneous nuclear ribonucleoprotein U-like 1	1	HLPSTEPDPHVVR	HLPSTEPDPHVVR	3	HLPSTEPDPHVVR3	11544	1617.09	
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	HLQAAVDR	HLQAAVDR	2	HLQAAVDR2	33366.1	29001.3	26744.7
Q80WD1	Q80WD1	R4RL2_RAT	Rtn4rl2	Reticulon-4 receptor-like 2	1	HLQALEELDLGDNR	HLQALEELDLGDNR	3	HLQALEELDLGDNR3	26937	13684.5	18218.3
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	HLQAQGVEVPSK	HLQAQGVEVPSK	2	HLQAQGVEVPSK2	47220.2	28045.5	37497.3
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	HLQAQGVEVPSK	HLQAQGVEVPSK	3	HLQAQGVEVPSK3	79227.4	81028.4	70520.1
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	HLQAQGVEVPSKDSLPK	HLQAQGVEVPSKDSLPK	3	HLQAQGVEVPSKDSLPK3	13580.1	19830.2	15082
Q02563	Q02563	SV2A_RAT	Sv2a	Synaptic vesicle glycoprotein 2A	1	HLQAVDYAAR	HLQAVDYAAR	2	HLQAVDYAAR2	2701.71	1359.21	4911.67
M0R3X3	M0R3X3	M0R3X3_RAT	Arhgef10	Rho guanine nucleotide exchange factor 10	1	HLQDVNIDAPVHSMLPGHQR	HLQDVNIDAPVHSMLPGHQR	4	HLQDVNIDAPVHSMLPGHQR4	2806.72		4526.52
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	HLQEAEQTK	HLQEAEQTK	2	HLQEAEQTK2			32922.9
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	HLQEAGHEAEAGSLLLAVQGTHR	HLQEAGHEAEAGSLLLAVQGTHR	4	HLQEAGHEAEAGSLLLAVQGTHR4	8893.88	19000.4	
D3ZWZ9	D3ZWZ9	GP107_RAT	Gpr107	Protein GPR107	1	HLQEASATDGK	HLQEASATDGK	2	HLQEASATDGK2			1275.57
Q91Z80	Q91Z80	LIPA4_RAT	Ppfia4	Liprin-alpha-4 (Fragment)	1	HLQELLEVAEQK	HLQELLEVAEQK	3	HLQELLEVAEQK3	2032.93		
B5DF45	B5DF45	TRAF6_RAT	Traf6	TNF receptor-associated factor 6	1	HLQENTQLHMR	HLQENTQLHMR	3	HLQENTQLHMR3	9203.36	9947.08	6594.01
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	HLQEQFDGQSK	HLQEQFDGQSK	2	HLQEQFDGQSK2	3393.05	12385	7440.54
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	HLQEQFDGQSK	HLQEQFDGQSK	3	HLQEQFDGQSK3	8496.8	12501.9	9412.13
A0A0G2JTX7	A0A0G2JTX7	A0A0G2JTX7_RAT	Col6a5	Collagen type VI alpha 5 chain	1	HLQESLK	HLQESLK	2	HLQESLK2	12093.1	6712.79	12498.1
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	HLQIDIEGLVDQMIDK	HLQIDIEGLVDQMIDK	2	HLQIDIEGLVDQMIDK2	5321.48	6574.27	9239.59
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	HLQIDIEGLVDQMIDK	HLQIDIEGLVDQMIDK	3	HLQIDIEGLVDQMIDK3	252927	81818.4	61853.8
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	HLQIIYEINQK	HLQIIYEINQK	2	HLQIIYEINQK2	13255.8	10580.3	8637.93
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	HLQIIYEINQK	HLQIIYEINQK	3	HLQIIYEINQK3	100596	91419.3	76891.5
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	HLQIIYEINQR	HLQIIYEINQR	2	HLQIIYEINQR2	3751.38	3974.64	
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	HLQIIYEINQR	HLQIIYEINQR	3	HLQIIYEINQR3	19246.7	18884	16981.4
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	HLQINQTFEELR	HLQINQTFEELR	2	HLQINQTFEELR2	15627.1	6203.46	9065.02
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	HLQINQTFEELR	HLQINQTFEELR	3	HLQINQTFEELR3	28241.9	26528.2	22435
A9UMV8;P02262;P0C169;P0C170;P0CC09;Q00728;Q4FZT6;Q64598	Q00728;Q64598;D3ZVK7;Q4FZT6;P0C169;A0A8I5ZP51;P0C170;A9UMV8;M0R6X5;A0A8I6AWT3;A0A8I6AR37;P02262;D4AEC0;D3ZXP3;G3V9C0;A0A8I5ZYY0;M0RDM4;Q6I8Q6;P0C0S7;P0CC09;A0A8I6ARS7;A0A8I6ASE8;A0A8L2QLK6	H2A1C_RAT;H2A1E_RAT;H2A1F_RAT;H2A1_RAT;H2A2A_RAT;H2A3_RAT;H2A4_RAT;H2AJ_RAT	H2ac18;H2ac25;H2aj	Histone H2A.J	0	HLQLAIR	HLQLAIR	2	HLQLAIR2	623523	121773	84113
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	HLQLLLPHATDIYSR	HLQLLLPHATDIYSR	3	HLQLLLPHATDIYSR3	2328.82	3205.26	
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	HLQLLLPHATDIYSR	HLQLLLPHATDIYSR	4	HLQLLLPHATDIYSR4	2505.63	958.246	2365.17
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	HLQLQTQLEQLQEETFR	HLQLQTQLEQLQEETFR	3	HLQLQTQLEQLQEETFR3	13169.9	18093.6	16745
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	HLQQLIEAAHR	HLQQLIEAAHR	3	HLQQLIEAAHR3	5014.58	9936.03	13846.2
A0A096MJ11	A0A096MJ11	A0A096MJ11_RAT	Gsdmd	Gasdermin D	1	HLQQPENK	HLQQPENK	2	HLQQPENK2			11180.9
Q08851	Q08851	STX5_RAT	Stx5	Syntaxin-5	1	HLQTHSNTIVVSLQSK	HLQTHSNTIVVSLQSK	3	HLQTHSNTIVVSLQSK3	4740.47	10577.1	9155.93
Q08851	Q08851	STX5_RAT	Stx5	Syntaxin-5	1	HLQTHSNTIVVSLQSK	HLQTHSNTIVVSLQSK	4	HLQTHSNTIVVSLQSK4	2238.52	5877.73	
P11960	P11960	ODBA_RAT	Bckdha	2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment)	1	HLQTYGEHYPLDHFDK	HLQTYGEHYPLDHFDK	3	HLQTYGEHYPLDHFDK3	3969.14	2569.27	1414.56
P11960	P11960	ODBA_RAT	Bckdha	2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment)	1	HLQTYGEHYPLDHFDK	HLQTYGEHYPLDHFDK	4	HLQTYGEHYPLDHFDK4	6393.04	6187.55	1470.91
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	HLQVIFGHLAASR	HLQVIFGHLAASR	2	HLQVIFGHLAASR2	2645.28	1892.29	6646.96
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	HLQVIFGHLAASR	HLQVIFGHLAASR	3	HLQVIFGHLAASR3	60135.9	82055.3	59565.2
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	HLQVILLDSNPLQSPPAQICLK	HLQVILLDSNPLQSPPAQIC(UniMod:4)LK	3	HLQVILLDSNPLQSPPAQIC(UniMod:4)LK3	28077.6	32484.2	38249.4
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	HLQVITLDNNPLQSPPAQICIK	HLQVITLDNNPLQSPPAQIC(UniMod:4)IK	3	HLQVITLDNNPLQSPPAQIC(UniMod:4)IK3	21805.7	20645.7	19494.1
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	HLRDEGLR	HLRDEGLR	2	HLRDEGLR2	19351		4986.49
A1L1J9	A1L1J9	LMF2_RAT	Lmf2	Lipase maturation factor 2	1	HLSAEPELR	HLSAEPELR	2	HLSAEPELR2	24012.9	20806.2	28558.3
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	HLSALLVGPQDQNLTFPLEASK	HLSALLVGPQDQNLTFPLEASK	3	HLSALLVGPQDQNLTFPLEASK3	17655.5	17343.8	26659.3
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	HLSAPSSMSPELQDPAK	HLSAPSSMSPELQDPAK	2	HLSAPSSMSPELQDPAK2	17404.4	11030	8462.17
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	HLSAPSSMSPELQDPAK	HLSAPSSMSPELQDPAK	3	HLSAPSSMSPELQDPAK3	120279	138263	125248
F1LR42	F1LR42	F1LR42_RAT	Rufy1	RUN and FYVE domain containing 1	1	HLSCTVGDLQTK	HLSC(UniMod:4)TVGDLQTK	2	HLSC(UniMod:4)TVGDLQTK2	2938.03	1412.77	
F1LR42	F1LR42	F1LR42_RAT	Rufy1	RUN and FYVE domain containing 1	1	HLSCTVGDLQTK	HLSC(UniMod:4)TVGDLQTK	3	HLSC(UniMod:4)TVGDLQTK3	15861.3	12888.7	8333.5
F1LN92	F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	1	HLSDAINEK	HLSDAINEK	2	HLSDAINEK2	14583.2	18004.1	18981
A0A8I5ZNY0	A0A8I5ZNY0	A0A8I5ZNY0_RAT	Avl9	AVL9 cell migration associated	1	HLSDAIVEVEEALIQIHDPELRK	HLSDAIVEVEEALIQIHDPELRK	4	HLSDAIVEVEEALIQIHDPELRK4	3397.32	6132.01	2007.06
A0A8I5ZZ89	A0A8I5ZZ89	A0A8I5ZZ89_RAT	Elp3	Elongator complex protein 3	1	HLSDMLTYGCTR	HLSDMLTYGC(UniMod:4)TR	3	HLSDMLTYGC(UniMod:4)TR3	3438.04	3130.36	
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	HLSEVALQTALSCSSR	HLSEVALQTALSC(UniMod:4)SSR	2	HLSEVALQTALSC(UniMod:4)SSR2	5036.51		
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	HLSEVALQTALSCSSR	HLSEVALQTALSC(UniMod:4)SSR	3	HLSEVALQTALSC(UniMod:4)SSR3	31565.2	42302.3	42043.6
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	HLSEVEALQTLQK	HLSEVEALQTLQK	2	HLSEVEALQTLQK2	2263.67		
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	HLSEVEALQTLQK	HLSEVEALQTLQK	3	HLSEVEALQTLQK3	33627.4	28453.6	29880.6
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	HLSFIVR	HLSFIVR	2	HLSFIVR2	132086	178787	147969
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	HLSFYIFDR	HLSFYIFDR	2	HLSFYIFDR2	343763	303390	307367
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	HLSFYIFDR	HLSFYIFDR	3	HLSFYIFDR3	35296.8	32317.8	34186.1
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	HLSFYIFDRDVFR	HLSFYIFDRDVFR	3	HLSFYIFDRDVFR3	192033	213119	205121
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	HLSFYIFDRDVFR	HLSFYIFDRDVFR	4	HLSFYIFDRDVFR4	22094.7	38410	28141
Q2PWT8	Q2PWT8	AP4M1_RAT	Ap4m1	AP-4 complex subunit mu-1	1	HLSHSNAYVIR	HLSHSNAYVIR	3	HLSHSNAYVIR3	3314.06	6387.25	6435.75
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	HLSIAVAATDQSYMPQQVTVAVGR	HLSIAVAATDQSYMPQQVTVAVGR	3	HLSIAVAATDQSYMPQQVTVAVGR3	9093.24	5346.18	
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	HLSLEQK	HLSLEQK	2	HLSLEQK2	37719.4	35183.2	41466.6
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	HLSLGSVQMCGVGK	HLSLGSVQMC(UniMod:4)GVGK	3	HLSLGSVQMC(UniMod:4)GVGK3	5692.89	2786.32	3811.25
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	HLSNSSSHSVVTNQQHSSTAELQK	HLSNSSSHSVVTNQQHSSTAELQK	4	HLSNSSSHSVVTNQQHSSTAELQK4		3386.33	
A0A8I5ZQ14	A0A8I5ZQ14	A0A8I5ZQ14_RAT	Afg3l1	AFG3(ATPase family gene 3)-like 1 (S. cerevisiae)	1	HLSPSVQER	HLSPSVQER	2	HLSPSVQER2	5433.77	4286.33	
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	HLSQTHDTVPSSSEPPEKER	HLSQTHDTVPSSSEPPEKER	4	HLSQTHDTVPSSSEPPEKER4	10009	11112.3	7151.6
B0BMY7	B0BMY7	B0BMY7_RAT	Twf2	Twinfilin actin-binding protein 2	1	HLSSCAAPAPLTSAER	HLSSC(UniMod:4)AAPAPLTSAER	2	HLSSC(UniMod:4)AAPAPLTSAER2	3568.26	1705.71	
B0BMY7	B0BMY7	B0BMY7_RAT	Twf2	Twinfilin actin-binding protein 2	1	HLSSCAAPAPLTSAER	HLSSC(UniMod:4)AAPAPLTSAER	3	HLSSC(UniMod:4)AAPAPLTSAER3	31263.6	27228	18332
P29411	P29411	KAD3_RAT	Ak3	GTP:AMP phosphotransferase AK3, mitochondrial	1	HLSSGDLLR	HLSSGDLLR	2	HLSSGDLLR2	53166.2	50893.4	79388
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	HLSSICDIMEK	HLSSIC(UniMod:4)DIMEK	2	HLSSIC(UniMod:4)DIMEK2	2491.84	3510.32	
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	HLSVILEK	HLSVILEK	2	HLSVILEK2	14001.7	7555.54	5427.28
Q9Z0V6	Q9Z0V6	PRDX3_RAT	Prdx3	Thioredoxin-dependent peroxide reductase, mitochondrial	1	HLSVNDLPVGR	HLSVNDLPVGR	2	HLSVNDLPVGR2	440392	343828	420780
Q9Z0V6	Q9Z0V6	PRDX3_RAT	Prdx3	Thioredoxin-dependent peroxide reductase, mitochondrial	1	HLSVNDLPVGR	HLSVNDLPVGR	3	HLSVNDLPVGR3	1.49941e+06	1.50005e+06	1.55876e+06
A0A8I5ZU93	A0A8I5ZU93	A0A8I5ZU93_RAT	Cops7a	COP9 signalosome subunit 7A	1	HLSVVTLAAK	HLSVVTLAAK	2	HLSVVTLAAK2	25366.5	16716.2	25769.9
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	HLTAALDR	HLTAALDR	2	HLTAALDR2	67426.9	63360.1	50989.1
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	HLTALIK	HLTALIK	2	HLTALIK2	33005.2	30779.6	21108.9
P21533	A0A0G2KBA1;P21533	RL6_RAT	Rpl6	Large ribosomal subunit protein eL6	0	HLTDAYFK	HLTDAYFK	2	HLTDAYFK2	35433.4	27002.8	28711.1
Q99MB4	Q99MB4	ZNG1_RAT	Zng1	Zinc-regulated GTPase metalloprotein activator 1	1	HLTEEKPDGLVNEATR	HLTEEKPDGLVNEATR	3	HLTEEKPDGLVNEATR3	5876.91	2408.52	13543.4
Q99MB4	Q99MB4	ZNG1_RAT	Zng1	Zinc-regulated GTPase metalloprotein activator 1	1	HLTEEKPDGLVNEATR	HLTEEKPDGLVNEATR	4	HLTEEKPDGLVNEATR4	4263.51	8505.95	4529.78
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	HLTELDVSCNEIQTVPSQIGNLEALR	HLTELDVSC(UniMod:4)NEIQTVPSQIGNLEALR	3	HLTELDVSC(UniMod:4)NEIQTVPSQIGNLEALR3	50267.4	49329.5	45680.3
P63329	P20651;P63329;E2CWF0	PP2BA_RAT	Ppp3ca	Protein phosphatase 3 catalytic subunit alpha	0	HLTEYFTFK	HLTEYFTFK	2	HLTEYFTFK2	80886.9	95648.8	85074.3
P62828	Q8K586;P62828;Q66H11	RAN_RAT	Ran	GTP-binding nuclear protein Ran	0	HLTGEFEK	HLTGEFEK	2	HLTGEFEK2	83965.5	38670.3	42611.4
D3ZU52	D3ZU52;A0A8I6GIJ6	D3ZU52_RAT	Cops7b	COP9 signalosome subunit 7B	0	HLTIVSLASR	HLTIVSLASR	2	HLTIVSLASR2	51629.8	41439	37075.8
B5DFI7	B5DFI7	B5DFI7_RAT	Qpctl	glutaminyl-peptide cyclotransferase	1	HLTLACHYDSK	HLTLAC(UniMod:4)HYDSK	3	HLTLAC(UniMod:4)HYDSK3	7306.82	6889.52	6995.34
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	HLTLFQAACR	HLTLFQAAC(UniMod:4)R	3	HLTLFQAAC(UniMod:4)R3	5308.96	5321.39	
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	HLTLSAR	HLTLSAR	2	HLTLSAR2	102942	102547	108956
Q9JJ46	Q9JJ46	EBP_RAT	Ebp	3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase	1	HLTNAQSMLDNK	HLTNAQSMLDNK	2	HLTNAQSMLDNK2	5084.84	1580.81	
Q9JJ46	Q9JJ46	EBP_RAT	Ebp	3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase	1	HLTNAQSMLDNK	HLTNAQSMLDNK	3	HLTNAQSMLDNK3	18829.8	18130.5	14284.7
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	HLTNVSSHSK	HLTNVSSHSK	2	HLTNVSSHSK2			17406.6
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	HLTPEPDIVASTK	HLTPEPDIVASTK	2	HLTPEPDIVASTK2	72789.5	76576.6	55690.3
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	HLTPEPDIVASTK	HLTPEPDIVASTK	3	HLTPEPDIVASTK3	242883	274405	289109
P30839	P11883;P30839	AL3A2_RAT	Aldh3a2	Aldehyde dehydrogenase family 3 member A2	0	HLTPVTLELGGK	HLTPVTLELGGK	2	HLTPVTLELGGK2	29598.1	23960.3	21752.6
P30839	P11883;P30839	AL3A2_RAT	Aldh3a2	Aldehyde dehydrogenase family 3 member A2	0	HLTPVTLELGGK	HLTPVTLELGGK	3	HLTPVTLELGGK3	19766.2	14959.3	20658.6
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	HLTQLTK	HLTQLTK	2	HLTQLTK2	80560.5	89269.9	91354.5
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	HLTTLTNQEQAMIFEEVQK	HLTTLTNQEQAMIFEEVQK	3	HLTTLTNQEQAMIFEEVQK3	13749.3	10022.6	9179.86
D4AE80	D4AE80	D4AE80_RAT	Dcp1a	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	HLTVEELFGTSLPK	HLTVEELFGTSLPK	3	HLTVEELFGTSLPK3	12117.3	10608	7971.99
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	HLTVFEVMPR	HLTVFEVMPR	2	HLTVFEVMPR2	113057	101388	84114.4
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	HLTVFEVMPR	HLTVFEVMPR	3	HLTVFEVMPR3	77132.8	101436	80441.9
O35509	O35509;P62494	RB11B_RAT	Rab11b	Ras-related protein Rab-11B	0	HLTYENVER	HLTYENVER	2	HLTYENVER2	942394	870077	1.06455e+06
O35509	O35509;P62494	RB11B_RAT	Rab11b	Ras-related protein Rab-11B	0	HLTYENVER	HLTYENVER	3	HLTYENVER3	306092	255111	371893
Q5M890	Q5M890	Q5M890_RAT	Apon	Apolipoprotein N	1	HLVASPGEIK	HLVASPGEIK	2	HLVASPGEIK2	425087	408111	385444
Q5M890	Q5M890	Q5M890_RAT	Apon	Apolipoprotein N	1	HLVASPGEIKR	HLVASPGEIKR	3	HLVASPGEIKR3	15942.5	23925.2	14888
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	HLVCNGDQDCLDGSDEDNCDDAR	HLVC(UniMod:4)NGDQDC(UniMod:4)LDGSDEDNC(UniMod:4)DDAR	3	HLVC(UniMod:4)NGDQDC(UniMod:4)LDGSDEDNC(UniMod:4)DDAR3	6878.28	5655.19	16182.5
O08769	O08769	O08769_RAT	Cdkn1b	Cyclin dependent kinase inhibitor	1	HLVDQMPDSSDSPAGLAEQCPGMR	HLVDQMPDSSDSPAGLAEQC(UniMod:4)PGMR	3	HLVDQMPDSSDSPAGLAEQC(UniMod:4)PGMR3	1594.76		
Q5U2R9	Q5U2R9	Q5U2R9_RAT	Scfd2	Sec1 family domain containing 2	1	HLVEAASR	HLVEAASR	2	HLVEAASR2	20532.9		21240.4
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	HLVESTNEMAPLK	HLVESTNEMAPLK	2	HLVESTNEMAPLK2	68084.8	62790.7	72438.7
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	HLVESTNEMAPLK	HLVESTNEMAPLK	3	HLVESTNEMAPLK3	34394.5	42586.4	38010.2
Q6P7B4	Q6P7B4	GAK1B_RAT	Gask1b	Golgi-associated kinase 1B	1	HLVFINNK	HLVFINNK	2	HLVFINNK2	14279.6	6563.02	9128.35
Q5M9G9	Q5M9G9	FAKD4_RAT	Tbrg4	FAST kinase domain-containing protein 4	1	HLVFLAESCAPFMK	HLVFLAESC(UniMod:4)APFMK	3	HLVFLAESC(UniMod:4)APFMK3	5850.56	2066.02	1468.25
Q641X8	Q641X8;A0A0G2K273	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	0	HLVFPLLEFLSVK	HLVFPLLEFLSVK	2	HLVFPLLEFLSVK2		45677.3	54896.7
Q641X8	Q641X8;A0A0G2K273	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	0	HLVFPLLEFLSVK	HLVFPLLEFLSVK	3	HLVFPLLEFLSVK3	17762.4	4745.51	7097.75
D3ZLM5	D3ZLM5	D3ZLM5_RAT	Nhlrc2	NHL repeat containing 2	1	HLVGGERDPMNLFAFGDVDGAGISAK	HLVGGERDPMNLFAFGDVDGAGISAK	4	HLVGGERDPMNLFAFGDVDGAGISAK4		18393.3	12450.9
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	HLVGLWTADNTTATNLLR	HLVGLWTADNTTATNLLR	3	HLVGLWTADNTTATNLLR3	4554.23	3819.43	4670.73
D3ZFQ8	D3ZFQ8	D3ZFQ8_RAT	Cyc1	Cytochrome c-1	1	HLVGVCYTEEEAK	HLVGVC(UniMod:4)YTEEEAK	2	HLVGVC(UniMod:4)YTEEEAK2	34821.1	16389.8	26151.6
D3ZFQ8	D3ZFQ8	D3ZFQ8_RAT	Cyc1	Cytochrome c-1	1	HLVGVCYTEEEAK	HLVGVC(UniMod:4)YTEEEAK	3	HLVGVC(UniMod:4)YTEEEAK3	52229.9	50110.5	50984
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	HLVHLDWMSR	HLVHLDWMSR	3	HLVHLDWMSR3	13275.2	12520.5	11349.4
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	HLVILSSVSDAAAR	HLVILSSVSDAAAR	2	HLVILSSVSDAAAR2	4761.77	4617.49	3868.85
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	HLVILSSVSDAAAR	HLVILSSVSDAAAR	3	HLVILSSVSDAAAR3	25677.9	20970.5	17415.6
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	HLVLSSGTLR	HLVLSSGTLR	2	HLVLSSGTLR2	71421.4	65873.9	57830.4
B1WC97	B1WC97	KCTD7_RAT	Kctd7	BTB/POZ domain-containing protein KCTD7	1	HLVNHYYCK	HLVNHYYC(UniMod:4)K	3	HLVNHYYC(UniMod:4)K3	2891.63	2097.87	2877.31
Q6P691	Q6P691	Q6P691_RAT	C2cd2	C2 calcium-dependent domain containing 2	1	HLVSAASPSVFLSTKPMQAK	HLVSAASPSVFLSTKPMQAK	4	HLVSAASPSVFLSTKPMQAK4	5382.11	4043.6	7292.39
B2GV38	B2GV38	UBL4A_RAT	Ubl4a	Ubiquitin-like protein 4A	1	HLVSDKLNVPVR	HLVSDKLNVPVR	3	HLVSDKLNVPVR3	15740.7	15954.9	19063.8
F7FH41	F7FH41	F7FH41_RAT	Csnk2a2	Casein kinase 2 alpha 2	1	HLVSPEALDLLDK	HLVSPEALDLLDK	2	HLVSPEALDLLDK2	21352.9	21067.3	29809.6
F7FH41	F7FH41	F7FH41_RAT	Csnk2a2	Casein kinase 2 alpha 2	1	HLVSPEALDLLDK	HLVSPEALDLLDK	3	HLVSPEALDLLDK3	33731.6	32182.1	46799.1
M0R4Z8	M0R4Z8	M0R4Z8_RAT	Gatd1	Glutamine amidotransferase like class 1 domain containing 1	1	HLVTGQNANSTVPAVQNLLFLCGGR	HLVTGQNANSTVPAVQNLLFLC(UniMod:4)GGR	3	HLVTGQNANSTVPAVQNLLFLC(UniMod:4)GGR3	12247.7	15387.5	11140.6
D3ZBP3	D3ZBP3	D3ZBP3_RAT	Exosc2	Ribosomal RNA-processing protein 4	1	HLVVPGDTITTDTGFMR	HLVVPGDTITTDTGFMR	3	HLVVPGDTITTDTGFMR3	7886.48	2396.26	6192.7
F1MAR6	F1MAR6	F1MAR6_RAT	Prodh	Proline dehydrogenase	1	HLVVPNVQTGQLEPLLSR	HLVVPNVQTGQLEPLLSR	3	HLVVPNVQTGQLEPLLSR3	8157.99	9657.22	14598.3
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	HLVYESDK	HLVYESDK	2	HLVYESDK2	16548.4	21721.4	13843.4
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	HLVYESDKNK	HLVYESDKNK	2	HLVYESDKNK2	5178.31		3714.21
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	HLVYESDKNK	HLVYESDKNK	3	HLVYESDKNK3	24364.8		35079.3
O35783	O35783	CALU_RAT	Calu	Calumenin	1	HLVYESDQDK	HLVYESDQDK	2	HLVYESDQDK2	58096.2	62002.8	68514.4
O35783	O35783	CALU_RAT	Calu	Calumenin	1	HLVYESDQDKDGK	HLVYESDQDKDGK	2	HLVYESDQDKDGK2			1372.74
O35783	O35783	CALU_RAT	Calu	Calumenin	1	HLVYESDQDKDGK	HLVYESDQDKDGK	3	HLVYESDQDKDGK3	12833.9	13894	16334.1
Q5M7U6	Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	1	HLWDYTFGPEK	HLWDYTFGPEK	2	HLWDYTFGPEK2	431489	476221	449854
Q5M7U6	Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	1	HLWDYTFGPEK	HLWDYTFGPEK	3	HLWDYTFGPEK3	94266.2	99680	113292
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	HLWENLGEK	HLWENLGEK	2	HLWENLGEK2	54203.1	47025.8	60275.3
P20673	P20673	ARLY_RAT	Asl	Argininosuccinate lyase	1	HLWNVDLQGSK	HLWNVDLQGSK	2	HLWNVDLQGSK2	5668.53	4753.77	4582.07
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	HLWSPFGLR	HLWSPFGLR	2	HLWSPFGLR2	49048	46098.8	36473.9
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	HLYDFVGNIR	HLYDFVGNIR	2	HLYDFVGNIR2	75675.8	82772.7	64699.1
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	HLYDFVGNIR	HLYDFVGNIR	3	HLYDFVGNIR3	158751	147888	156030
P32038	P32038	CFAD_RAT	Cfd	Complement factor D	1	HLYDVQSVVLHPGSRPDSVEDDLMLFK	HLYDVQSVVLHPGSRPDSVEDDLMLFK	4	HLYDVQSVVLHPGSRPDSVEDDLMLFK4	163760	137932	138333
A0A8I6A5X2	A0A8I6A5X2	A0A8I6A5X2_RAT	Usp32	ubiquitinyl hydrolase 1	1	HLYELNR	HLYELNR	2	HLYELNR2	9177.31	16760.8	9041.95
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	HLYFACR	HLYFAC(UniMod:4)R	2	HLYFAC(UniMod:4)R2	36519.4	15964.3	21132.8
E9PTK4	E9PTK4	E9PTK4_RAT	Thnsl1	Threonine synthase-like 1	1	HLYLMANK	HLYLMANK	2	HLYLMANK2	4727.18		2565.62
P63245	P63245	RACK1_RAT	Rack1	Small ribosomal subunit protein RACK1	1	HLYTLDGGDIINALCFSPNR	HLYTLDGGDIINALC(UniMod:4)FSPNR	3	HLYTLDGGDIINALC(UniMod:4)FSPNR3	29155.5	16603.6	15626.2
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	HLYVLAAEPR	HLYVLAAEPR	2	HLYVLAAEPR2	4087.88		
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	HLYVLAAEPR	HLYVLAAEPR	3	HLYVLAAEPR3	5662.62	6433.22	2861.07
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	HMAAASAECQNYAK	HMAAASAEC(UniMod:4)QNYAK	2	HMAAASAEC(UniMod:4)QNYAK2	3191.28	8047.08	5389.47
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	HMAAASAECQNYAK	HMAAASAEC(UniMod:4)QNYAK	3	HMAAASAEC(UniMod:4)QNYAK3	19134.8	29280.4	26786.3
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	HMAAPLIGQLTR	HMAAPLIGQLTR	3	HMAAPLIGQLTR3	51823.9	75711.1	52540.6
P51792	P51792	CLCN3_RAT	Clcn3	H(+)/Cl(-) exchange transporter 3	1	HMAQTANQDPASIMFN	HMAQTANQDPASIMFN	2	HMAQTANQDPASIMFN2	11816.4	20300.7	13969.6
A0A8I6AT08	A0A8I6AT08	A0A8I6AT08_RAT	Plac9	Placenta associated 9	1	HMAVQGR	HMAVQGR	2	HMAVQGR2			11669.7
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	HMCSVLQHK	HMC(UniMod:4)SVLQHK	2	HMC(UniMod:4)SVLQHK2	10859.8	11276.8	9419.62
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	HMCSVLQHK	HMC(UniMod:4)SVLQHK	3	HMC(UniMod:4)SVLQHK3	635194	690581	677790
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	HMDLCLTVVDR	HMDLC(UniMod:4)LTVVDR	2	HMDLC(UniMod:4)LTVVDR2	1547.88	2733.19	1091.84
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	HMDLCLTVVDR	HMDLC(UniMod:4)LTVVDR	3	HMDLC(UniMod:4)LTVVDR3	26386.1	22541.7	23776.3
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	HMDPPPAPMQDR	HMDPPPAPMQDR	3	HMDPPPAPMQDR3	8982.85	9423.44	13671.9
P24594	P24594	IBP5_RAT	Igfbp5	Insulin-like growth factor-binding protein 5	1	HMEASLQEFK	HMEASLQEFK	2	HMEASLQEFK2	16463.7	16502.7	15168
P24594	P24594	IBP5_RAT	Igfbp5	Insulin-like growth factor-binding protein 5	1	HMEASLQEFK	HMEASLQEFK	3	HMEASLQEFK3	14743.8	21081	18463.2
Q5XXR3	Q5XXR3	ARHG6_RAT	Arhgef6	Rho guanine nucleotide exchange factor 6	1	HMEDTHPDHQDILK	HMEDTHPDHQDILK	4	HMEDTHPDHQDILK4	4192.19	4864.38	
O55043	O55043	ARHG7_RAT	Arhgef7	Rho guanine nucleotide exchange factor 7	1	HMEDYHPDR	HMEDYHPDR	3	HMEDYHPDR3	396573		329694
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	HMEMYADR	HMEMYADR	2	HMEMYADR2	6481.51	7657.08	19161.7
F1M7Z1	F1M7Z1	F1M7Z1_RAT	Edc3	Enhancer of mRNA-decapping protein 3	1	HMESLSQSK	HMESLSQSK	2	HMESLSQSK2	15530	9085.96	9804.85
E9PU10	E9PU10	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	1	HMFALLLPNISDASIELK	HMFALLLPNISDASIELK	3	HMFALLLPNISDASIELK3	22080.6	16535.5	21472.2
E9PU10	E9PU10	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	1	HMFALLLPNISDASIELKK	HMFALLLPNISDASIELKK	3	HMFALLLPNISDASIELKK3	14023.8	13494	20268.9
E9PU10	E9PU10	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	1	HMFALLLPNISDASIELKK	HMFALLLPNISDASIELKK	4	HMFALLLPNISDASIELKK4	22951	21478.5	15731.8
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	HMFHVAWVDSEDPYK	HMFHVAWVDSEDPYK	3	HMFHVAWVDSEDPYK3	4830.19	7152.42	7639.52
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	HMFHVAWVDSEDPYKGYK	HMFHVAWVDSEDPYKGYK	4	HMFHVAWVDSEDPYKGYK4	1844.69	2319.2	
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	HMFTDHIVFQFDCTNTLNDQLLEK	HMFTDHIVFQFDC(UniMod:4)TNTLNDQLLEK	4	HMFTDHIVFQFDC(UniMod:4)TNTLNDQLLEK4	9375.32	7356.31	11879.2
O70196	O70196	PPCE_RAT	Prep	Prolyl endopeptidase	1	HMGGVLAVANIR	HMGGVLAVANIR	3	HMGGVLAVANIR3	7531.36	4548.92	5016.01
Q99NA5	Q99NA5	IDH3A_RAT	Idh3a	Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial	1	HMGLFDHAAK	HMGLFDHAAK	2	HMGLFDHAAK2	1394.43	4088.85	
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	HMHIADVSK	HMHIADVSK	2	HMHIADVSK2	44653.8	36107.7	37892.5
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	HMHIADVSKK	HMHIADVSKK	2	HMHIADVSKK2	8153.76		10429.6
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	HMHIADVSKK	HMHIADVSKK	3	HMHIADVSKK3	39329.9		50097.3
Q10473	Q10473	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	1	HMIEEIVLVDDASER	HMIEEIVLVDDASER	3	HMIEEIVLVDDASER3	9117.57	10372.4	
Q10473	Q10473	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	1	HMIEEIVLVDDASERDFLK	HMIEEIVLVDDASERDFLK	3	HMIEEIVLVDDASERDFLK3	12173.7	15881.5	14210.6
Q10473	Q10473	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	1	HMIEEIVLVDDASERDFLK	HMIEEIVLVDDASERDFLK	4	HMIEEIVLVDDASERDFLK4	8936.27	12517.8	16905.3
D4A3P1	D4A3P1	D4A3P1_RAT	Ubqln4	Ubiquilin 4	1	HMIMANPQMQQLMER	HMIMANPQMQQLMER	3	HMIMANPQMQQLMER3	1599.74		
Q9JHB5	Q9JHB5	TSNAX_RAT	Tsnax	Translin-associated protein X	1	HMLADVFSVK	HMLADVFSVK	2	HMLADVFSVK2	12915.5	7359.56	8287.2
Q9JHB5	Q9JHB5	TSNAX_RAT	Tsnax	Translin-associated protein X	1	HMLADVFSVK	HMLADVFSVK	3	HMLADVFSVK3	2679.75	3862.36	4101.58
Q5PPJ9	Q5PPJ9	SHLB2_RAT	Sh3glb2	Endophilin-B2	1	HMLDLQK	HMLDLQK	2	HMLDLQK2	23180.9	32761.4	6584.8
Q8K3R0	Q8K3R0	EST2A_RAT	Ces2a	Pyrethroid hydrolase Ces2a	1	HMLGDFMFVIPALQVAHFQR	HMLGDFMFVIPALQVAHFQR	4	HMLGDFMFVIPALQVAHFQR4	1463.13		
P62912	P62912;A0A8L2ULN5;D4A412	RL32_RAT	Rpl32	Large ribosomal subunit protein eL32	0	HMLPSGFR	HMLPSGFR	2	HMLPSGFR2	48582.2	37457.9	26639.1
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	HMLPTVLR	HMLPTVLR	2	HMLPTVLR2	686062	596368	657040
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	HMLQIWK	HMLQIWK	2	HMLQIWK2	7647.72	10385.3	18119.3
P54645	P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	1	HMLQVDPMK	HMLQVDPMK	2	HMLQVDPMK2	33733.5	42899.9	25762.8
P54645	P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	1	HMLQVDPMKR	HMLQVDPMKR	3	HMLQVDPMKR3	43877.4	47643	56439.7
M0RD40	M0RD40	M0RD40_RAT	Sik3	non-specific serine/threonine protein kinase	1	HMLVLDPNK	HMLVLDPNK	2	HMLVLDPNK2	9499.7	7465.01	5287.66
M0RD40	M0RD40	M0RD40_RAT	Sik3	non-specific serine/threonine protein kinase	1	HMLVLDPNKR	HMLVLDPNKR	3	HMLVLDPNKR3	18588.2	15519.1	47101.7
Q6PCU2	D3ZJ78;Q6PCU2	VATE1_RAT	Atp6v1e1	V-type proton ATPase subunit E 1	0	HMMAFIEQEANEK	HMMAFIEQEANEK	2	HMMAFIEQEANEK2		4416.24	7315.03
D4A3X7	D4A3X7	D4A3X7_RAT	Snx33	Sorting nexin	1	HMMQSYLR	HMMQSYLR	2	HMMQSYLR2	8615.78	16392	12246.4
P04762	P04762	CATA_RAT	Cat	Catalase	1	HMNGYGSHTFK	HMNGYGSHTFK	3	HMNGYGSHTFK3	2663.49		1845.32
P17136;P63164	P63164;P17136;A0A8I6A9Y5	RSMB_RAT;RSMN_RAT	Snrpb;Snrpn	Small nuclear ribonucleoprotein-associated protein B	0	HMNLILCDCDEFRK	HMNLILC(UniMod:4)DC(UniMod:4)DEFRK	3	HMNLILC(UniMod:4)DC(UniMod:4)DEFRK3	6445.79	5010.09	
P14270	P14270	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	1	HMNLLADLK	HMNLLADLK	2	HMNLLADLK2	19537.6	17290.5	18395.5
M0R915	M0R915;A0A8I6GLQ4	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	0	HMNLPEAYSSLGTDHLLGCEVFLISK	HMNLPEAYSSLGTDHLLGC(UniMod:4)EVFLISK	4	HMNLPEAYSSLGTDHLLGC(UniMod:4)EVFLISK4	15294	13921.2	12738.2
Q5U1X1	Q5U1X1	ORN_RAT	Rexo2	Oligoribonuclease, mitochondrial	1	HMPQFMK	HMPQFMK	2	HMPQFMK2	4409.03	6193.08	
D4A8F2	D4A8F2	D4A8F2_RAT	Rsu1	Ras suppressor protein 1	1	HMQANPEPPK	HMQANPEPPK	2	HMQANPEPPK2	222483	201238	216785
D4A8F2	D4A8F2	D4A8F2_RAT	Rsu1	Ras suppressor protein 1	1	HMQANPEPPK	HMQANPEPPK	3	HMQANPEPPK3	216166	202764	
D4A8F2	D4A8F2	D4A8F2_RAT	Rsu1	Ras suppressor protein 1	1	HMQANPEPPKK	HMQANPEPPKK	2	HMQANPEPPKK2			8078.42
D4A8F2	D4A8F2	D4A8F2_RAT	Rsu1	Ras suppressor protein 1	1	HMQANPEPPKK	HMQANPEPPKK	3	HMQANPEPPKK3			91097.8
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	HMQGIQFR	HMQGIQFR	2	HMQGIQFR2	11616.5	10262.5	15513.2
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	HMQPPSSSGAQLCTVYYASLNFR	HMQPPSSSGAQLC(UniMod:4)TVYYASLNFR	3	HMQPPSSSGAQLC(UniMod:4)TVYYASLNFR3	5418.83	959.44	
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	HMSEFMQCNLDELVK	HMSEFMQC(UniMod:4)NLDELVK	2	HMSEFMQC(UniMod:4)NLDELVK2	143472	140435	132064
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	HMSEFMQCNLDELVK	HMSEFMQC(UniMod:4)NLDELVK	3	HMSEFMQC(UniMod:4)NLDELVK3	2.33248e+06	2.50016e+06	2.52057e+06
Q9ES54	Q9ES54	NPL4_RAT	Nploc4	Nuclear protein localization protein 4 homolog	1	HMSFHAYIR	HMSFHAYIR	3	HMSFHAYIR3	15088.1	17985.6	21910
E9PST5	E9PST5	E9PST5_RAT	Acin1	Apoptotic chromatin condensation inducer 1	1	HMSQPEPEQK	HMSQPEPEQK	2	HMSQPEPEQK2	4244.12		5286.89
A0A8I6GK77	A0A8I6GK77	A0A8I6GK77_RAT	Bcas3	BCAS3, microtubule associated cell migration factor	1	HMSSMEHTEEGLR	HMSSMEHTEEGLR	3	HMSSMEHTEEGLR3		5886.69	
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	HMTLDSFDAMFR	HMTLDSFDAMFR	2	HMTLDSFDAMFR2	10036.9	13951.6	13238
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	HMTLDSFDAMFR	HMTLDSFDAMFR	3	HMTLDSFDAMFR3	46525.1	43040.7	40050.9
Q5M7U6	Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	1	HMVFLGGAVLADIMK	HMVFLGGAVLADIMK	2	HMVFLGGAVLADIMK2	122671	68469.5	103946
Q5M7U6	Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	1	HMVFLGGAVLADIMK	HMVFLGGAVLADIMK	3	HMVFLGGAVLADIMK3	141746	111967	142354
Q5M7U6	Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	1	HMVFLGGAVLADIMKDK	HMVFLGGAVLADIMKDK	3	HMVFLGGAVLADIMKDK3	10022.8	4685.08	4360.98
Q5M7U6	Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	1	HMVFLGGAVLADIMKDKDNFWMTR	HMVFLGGAVLADIMKDKDNFWMTR	4	HMVFLGGAVLADIMKDKDNFWMTR4	6469.15	2230.42	
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	HMVGPDWR	HMVGPDWR	2	HMVGPDWR2	56513.9	43053.9	51186.4
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	HMWPFICQFIEK	HMWPFIC(UniMod:4)QFIEK	3	HMWPFIC(UniMod:4)QFIEK3	6474.14	7292.43	6648.64
P84100	P84100	RL19_RAT	Rpl19	Large ribosomal subunit protein eL19	1	HMYHSLYLK	HMYHSLYLK	3	HMYHSLYLK3	39181.9	27970.9	26894.3
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	HMYVFGDFK	HMYVFGDFK	2	HMYVFGDFK2	93775.4	82331.7	111898
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	HMYVFGDFK	HMYVFGDFK	3	HMYVFGDFK3	8529.68	13551	11906.3
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	HMYVFGDFKDVLIPGK	HMYVFGDFKDVLIPGK	3	HMYVFGDFKDVLIPGK3	61143.2	57502.1	75329.9
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	HMYVFGDFKDVLIPGK	HMYVFGDFKDVLIPGK	4	HMYVFGDFKDVLIPGK4	17357.6	21850.7	22765.1
Q68FQ7	Q68FQ7	RPAP3_RAT	Rpap3	RNA polymerase II-associated protein 3	1	HNAEELQDFMR	HNAEELQDFMR	3	HNAEELQDFMR3	3863.49	6089.09	
B1WBN7	B1WBN7;I7LRF5	B1WBN7_RAT	Fam20c	FAM20C	0	HNAEIAAFHLDR	HNAEIAAFHLDR	2	HNAEIAAFHLDR2	2866.73	4274.85	
B1WBN7	B1WBN7;I7LRF5	B1WBN7_RAT	Fam20c	FAM20C	0	HNAEIAAFHLDR	HNAEIAAFHLDR	3	HNAEIAAFHLDR3	70465.9	63311.2	55743.4
D3ZUZ4	D3ZUZ4	D3ZUZ4_RAT	Fam20b	FAM20B, glycosaminoglycan xylosylkinase	1	HNAEVAAFHLDR	HNAEVAAFHLDR	3	HNAEVAAFHLDR3	7035.28	6305.52	4506.81
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	HNALIQEVISQSR	HNALIQEVISQSR	2	HNALIQEVISQSR2	3298.34	1933.74	
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	HNALIQEVISQSR	HNALIQEVISQSR	3	HNALIQEVISQSR3	54767.2	54154.8	42057.6
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	HNDAELAK	HNDAELAK	2	HNDAELAK2			8824.23
P34058	P82995;P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	HNDDEQYAWESSAGGSFTVR	HNDDEQYAWESSAGGSFTVR	3	HNDDEQYAWESSAGGSFTVR3	121633	104968	108514
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	HNDLDDVGK	HNDLDDVGK	2	HNDLDDVGK2	5839.46	6944.86	
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	HNDMPIYEAADK	HNDMPIYEAADK	3	HNDMPIYEAADK3	19097.7	22104.8	21076.1
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	HNDNIMLK	HNDNIMLK	2	HNDNIMLK2	3978.37	2099.29	4300.92
B5DFI9	B5DFI9	B5DFI9_RAT	Pdk3	Protein-serine/threonine kinase	1	HNDVVPTMAQGVIEYK	HNDVVPTMAQGVIEYK	3	HNDVVPTMAQGVIEYK3	5955.72	11364.9	
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	HNEEALSR	HNEEALSR	2	HNEEALSR2	44967.4		45353.7
B0K020	B0K020	CISD1_RAT	Cisd1	CDGSH iron-sulfur domain-containing protein 1	1	HNEETGDNVGPLIIK	HNEETGDNVGPLIIK	3	HNEETGDNVGPLIIK3	60664.9	57133.2	57061.5
D4AAE9	D4AAE9	D4AAE9_RAT	Cisd2	CDGSH iron-sulfur domain-containing protein 2	1	HNELTGDNVGPLILR	HNELTGDNVGPLILR	2	HNELTGDNVGPLILR2	2494.99	3818.58	
D4AAE9	D4AAE9	D4AAE9_RAT	Cisd2	CDGSH iron-sulfur domain-containing protein 2	1	HNELTGDNVGPLILR	HNELTGDNVGPLILR	3	HNELTGDNVGPLILR3	207563	214927	207807
Q4V8E2	Q4V8E2	Q4V8E2_RAT	Psmd14	Proteasome 26S subunit, non-ATPase 14	1	HNESVVK	HNESVVK	2	HNESVVK2			55698.9
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	HNFFESSLDYVYQIQEVQESK	HNFFESSLDYVYQIQEVQESK	3	HNFFESSLDYVYQIQEVQESK3		9926.32	14419.9
D4AB70	D4AB70	D4AB70_RAT	Edem3	alpha-1,2-Mannosidase	1	HNFLPEAFTTDFR	HNFLPEAFTTDFR	3	HNFLPEAFTTDFR3			6586.8
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	HNFQGIEK	HNFQGIEK	2	HNFQGIEK2	4047.96	8089.63	6765.57
A0A0G2JZH0	Q5XIJ7;A0A0G2JZH0	A0A0G2JZH0_RAT	Cab39	Calcium binding protein 39	0	HNFTIMTK	HNFTIMTK	2	HNFTIMTK2	10120.5	11609.5	14780
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	HNFTPLAR	HNFTPLAR	2	HNFTPLAR2	51493	30118.1	41368.9
Q5I0C3	Q5I0C3	MCCA_RAT	Mccc1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	1	HNFYFMEMNTR	HNFYFMEMNTR	2	HNFYFMEMNTR2		5990.62	
Q5I0C3	Q5I0C3	MCCA_RAT	Mccc1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	1	HNFYFMEMNTR	HNFYFMEMNTR	3	HNFYFMEMNTR3	8731.31	9172.03	8149.13
P23358	P23358;A0A8I6A1H0;D3ZJE2	RL12_RAT	Rpl12	Large ribosomal subunit protein uL11	0	HNGNITFDEIVNIAR	HNGNITFDEIVNIAR	3	HNGNITFDEIVNIAR3	7168.04		6142.62
A0A8I6ASK6	A0A8I6ASK6	A0A8I6ASK6_RAT	Fcrl1	Fc receptor-like 1	1	HNGQWGTVCDDGWDLIDVSVVCR	HNGQWGTVC(UniMod:4)DDGWDLIDVSVVC(UniMod:4)R	3	HNGQWGTVC(UniMod:4)DDGWDLIDVSVVC(UniMod:4)R3	33469.8	30844.8	31319.6
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	HNGREEEFFTYR	HNGREEEFFTYR	2	HNGREEEFFTYR2	55343.4	51430.3	53952.6
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	HNGREEEFFTYR	HNGREEEFFTYR	3	HNGREEEFFTYR3	6.6834e+06	7.59428e+06	9.01059e+06
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	HNGREEEFFTYR	HNGREEEFFTYR	4	HNGREEEFFTYR4	82954.4	4.68632e+06	5.57422e+06
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	HNGVDGLIPHQYIVVQDMDDAFSDSLSQK	HNGVDGLIPHQYIVVQDMDDAFSDSLSQK	4	HNGVDGLIPHQYIVVQDMDDAFSDSLSQK4		2907.04	
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	HNGVVPVVK	HNGVVPVVK	2	HNGVVPVVK2	5499.83	5322.31	6090.54
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	HNGVWHLVGITSWGEGCGQK	HNGVWHLVGITSWGEGC(UniMod:4)GQK	3	HNGVWHLVGITSWGEGC(UniMod:4)GQK3	6462.14	5861.97	4522.26
A0A8I6AD67	A0A8I6AD67	A0A8I6AD67_RAT	Parp9	Poly [ADP-ribose] polymerase	1	HNIFEILK	HNIFEILK	2	HNIFEILK2	3312.15	2066.04	6336.33
Q9WTV5	Q9WTV5	PSMD9_RAT	Psmd9	26S proteasome non-ATPase regulatory subunit 9	1	HNIICLQNDHK	HNIIC(UniMod:4)LQNDHK	3	HNIIC(UniMod:4)LQNDHK3	36964.8	45293.7	41661.9
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	HNIMDFAMPYFIQVMK	HNIMDFAMPYFIQVMK	3	HNIMDFAMPYFIQVMK3	94915	89854.8	85647.1
P09456	P09456	KAP0_RAT	Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit	1	HNIQALLK	HNIQALLK	2	HNIQALLK2	53378.6	74631.9	62511.9
Q9JLZ1	Q9JLZ1	GLRX3_RAT	Glrx3	Glutaredoxin-3	1	HNIQFSSFDIFSDEEVR	HNIQFSSFDIFSDEEVR	3	HNIQFSSFDIFSDEEVR3	31840.1	27371.7	25377.8
A0A0G2K3L8	A0A0G2K3L8	A0A0G2K3L8_RAT	Wdfy1	WD repeat and FYVE domain containing 1	1	HNISHMSMDIAR	HNISHMSMDIAR	3	HNISHMSMDIAR3	28260.2	14844.3	23423.9
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	HNIYYWHVIAAK	HNIYYWHVIAAK	3	HNIYYWHVIAAK3	9167.98	9447.89	9707.36
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	HNKPDEGFYQCVATVDNLGTIVSR	HNKPDEGFYQC(UniMod:4)VATVDNLGTIVSR	3	HNKPDEGFYQC(UniMod:4)VATVDNLGTIVSR3	15014.1	15182.7	14168.2
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	HNKPDEGFYQCVATVDNLGTIVSR	HNKPDEGFYQC(UniMod:4)VATVDNLGTIVSR	4	HNKPDEGFYQC(UniMod:4)VATVDNLGTIVSR4	27905.5	34867.3	30292.9
B2RZ72	B2RZ72	B2RZ72_RAT	Arpc4	Actin-related protein 2/3 complex subunit 4	1	HNKPEVEVR	HNKPEVEVR	2	HNKPEVEVR2			1809.34
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	HNLCVVYFEEK	HNLC(UniMod:4)VVYFEEK	2	HNLC(UniMod:4)VVYFEEK2	4857.65	13246.1	
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	HNLCVVYFEEK	HNLC(UniMod:4)VVYFEEK	3	HNLC(UniMod:4)VVYFEEK3	9440.57	12134.6	13549.1
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	HNLEHAFDVAER	HNLEHAFDVAER	2	HNLEHAFDVAER2	3751.74	4076.4	3582.35
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	HNLEHAFDVAER	HNLEHAFDVAER	3	HNLEHAFDVAER3	12495.9	23167.2	30099.1
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	HNLEQDLVR	HNLEQDLVR	2	HNLEQDLVR2	6533.3	6753.13	12664.4
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	HNLEQDLVREELNK	HNLEQDLVREELNK	3	HNLEQDLVREELNK3	8404.05	15783.3	
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	HNLFATADNAVVPDGWK	HNLFATADNAVVPDGWK	2	HNLFATADNAVVPDGWK2	8904.87	7666.88	4252.58
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	HNLFATADNAVVPDGWK	HNLFATADNAVVPDGWK	3	HNLFATADNAVVPDGWK3	17750.6	25817.9	20500.6
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	HNLFEDNMALPSESVSSLTDLK	HNLFEDNMALPSESVSSLTDLK	3	HNLFEDNMALPSESVSSLTDLK3	6239.71	11483.7	6903.54
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	HNLFSSIK	HNLFSSIK	2	HNLFSSIK2	6669.33	2622.48	
Q5XIA4	Q5XIA4	CNO10_RAT	Cnot10	CCR4-NOT transcription complex subunit 10	1	HNLGIFYFK	HNLGIFYFK	2	HNLGIFYFK2	2393.52		1595.95
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	HNLLASK	HNLLASK	1	HNLLASK1	7213.32	3994.26	5051.97
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	HNLLASK	HNLLASK	2	HNLLASK2	178163	197713	189328
B2GUY0	B2GUY0	MA1B1_RAT	Man1b1	Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase	1	HNLLRPETVESLFYLYR	HNLLRPETVESLFYLYR	4	HNLLRPETVESLFYLYR4	3815.75	5418.83	2558.65
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	HNLQDFINIK	HNLQDFINIK	2	HNLQDFINIK2	1330.04	1061.23	5296.3
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	HNLSQVPEADSVSFLQELLALR	HNLSQVPEADSVSFLQELLALR	3	HNLSQVPEADSVSFLQELLALR3	5751.24	7698.38	10846.7
G3V7P2	G3V7P2	G3V7P2_RAT	Fgl2	Fibrinogen-like 2	1	HNLTEGLEDASAQAACPAR	HNLTEGLEDASAQAAC(UniMod:4)PAR	3	HNLTEGLEDASAQAAC(UniMod:4)PAR3	95764.5	75716.5	71289.6
P01836	P01836	KACA_RAT		Ig kappa chain C region, A allele	1	HNLYTCEVVHK	HNLYTC(UniMod:4)EVVHK	3	HNLYTC(UniMod:4)EVVHK3	10964.7	9874.14	9807.28
A0A8I6A9M1	A0A8I6A9M1	A0A8I6A9M1_RAT	Cmip	C-Maf-inducing protein	1	HNMDFGK	HNMDFGK	2	HNMDFGK2	2164.48		
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	HNNCVTLTHTNQVVR	HNNC(UniMod:4)VTLTHTNQVVR	3	HNNC(UniMod:4)VTLTHTNQVVR3		3002.01	3160.5
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	HNNCVTLTHTNQVVR	HNNC(UniMod:4)VTLTHTNQVVR	4	HNNC(UniMod:4)VTLTHTNQVVR4	7614.49	4977.26	6423.55
Q68FX0	Q68FX0	IDH3B_RAT	Idh3B	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	HNNLDLVIIR	HNNLDLVIIR	2	HNNLDLVIIR2	5564.5	3550.67	2733.65
Q68FX0	Q68FX0	IDH3B_RAT	Idh3B	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	HNNLDLVIIR	HNNLDLVIIR	3	HNNLDLVIIR3	87802.9	70335.7	102021
Q32Q06	Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	1	HNNLYLVATSK	HNNLYLVATSK	2	HNNLYLVATSK2	8375.09	9953.06	5058.29
Q32Q06	Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	1	HNNLYLVATSK	HNNLYLVATSK	3	HNNLYLVATSK3	22474.4	22293	16327.9
Q9WTS8	Q9WTS8	FCN1_RAT	Fcn1	Ficolin-1	1	HNNMAFSTHDQDNDTNGGK	HNNMAFSTHDQDNDTNGGK	3	HNNMAFSTHDQDNDTNGGK3	3270.65	5629.08	5021.45
Q9WTS8	Q9WTS8	FCN1_RAT	Fcn1	Ficolin-1	1	HNNMAFSTHDQDNDTNGGK	HNNMAFSTHDQDNDTNGGK	4	HNNMAFSTHDQDNDTNGGK4	8426.56	10055.3	15126.7
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	HNNVNQMVFHK	HNNVNQMVFHK	3	HNNVNQMVFHK3	42410.3	44247.8	28741.5
Q68FP2	Q68FP2	PON3_RAT	Pon3	Serum paraoxonase/lactonase 3	1	HNNWDLTPVK	HNNWDLTPVK	2	HNNWDLTPVK2	8360.75	6809.37	11727
B1WBN7	B1WBN7	B1WBN7_RAT	Fam20c	FAM20C	1	HNPAIDALLHDLGSQK	HNPAIDALLHDLGSQK	3	HNPAIDALLHDLGSQK3	108490	109247	107295
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	HNPGEDEYEK	HNPGEDEYEK	2	HNPGEDEYEK2			3992.27
A0A8I5ZUE7	A0A8I5ZUE7	A0A8I5ZUE7_RAT	Zc3h7b	Zinc finger CCCH-type containing 7B	1	HNPGKPGEGTPISSR	HNPGKPGEGTPISSR	3	HNPGKPGEGTPISSR3	10111.8	3891.69	
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	HNPHALVLK	HNPHALVLK	2	HNPHALVLK2	45607.6	51313.2	28118.3
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	HNPQSPLQDSSATLK	HNPQSPLQDSSATLK	3	HNPQSPLQDSSATLK3	48570.3	52841.9	47478
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	HNPTGAILFLGQVNKP	HNPTGAILFLGQVNKP	2	HNPTGAILFLGQVNKP2	6477.52	5859.04	3840.55
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	HNPTGAILFLGQVNKP	HNPTGAILFLGQVNKP	3	HNPTGAILFLGQVNKP3	96771.4	72550.6	112982
Q4V7C7	A0A8I6GL35;Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	0	HNPVFGVMS	HNPVFGVMS	2	HNPVFGVMS2	413493	403177	433829
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	HNQELHSHLSEEIDR	HNQELHSHLSEEIDR	3	HNQELHSHLSEEIDR3	4266.69		3739.66
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	HNQELHSHLSEEIDR	HNQELHSHLSEEIDR	4	HNQELHSHLSEEIDR4	23738.3	31890.1	23710
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	HNQENIPQAVTEK	HNQENIPQAVTEK	3	HNQENIPQAVTEK3	5492.08		6844.14
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	HNQLPLVIEFTEQTAPK	HNQLPLVIEFTEQTAPK	3	HNQLPLVIEFTEQTAPK3	1.85706e+06	1.86719e+06	1.83233e+06
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	HNQLPLVIEFTEQTAPK	HNQLPLVIEFTEQTAPK	4	HNQLPLVIEFTEQTAPK4	4102.62	3180.2	3062.6
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	HNQVESIFLSAIDMYGHQFCIENLQK	HNQVESIFLSAIDMYGHQFC(UniMod:4)IENLQK	4	HNQVESIFLSAIDMYGHQFC(UniMod:4)IENLQK4	1847.6	3697.54	3062.6
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	HNRFDPPIVAR	HNRFDPPIVAR	3	HNRFDPPIVAR3	311398	1.00264e+06	771518
A0A8I6A6I4	A0A8I6A6I4	A0A8I6A6I4_RAT	Atp11b	Phospholipid-transporting ATPase	1	HNSDNEVNGAPVYVVR	HNSDNEVNGAPVYVVR	3	HNSDNEVNGAPVYVVR3	7877.25	3602.21	3143.57
D4A3E2	D4A3E2	D4A3E2_RAT	Npepl1	Aminopeptidase-like 1	1	HNSPSAAHFITR	HNSPSAAHFITR	3	HNSPSAAHFITR3	24069.4	25079.2	18729.3
Q68FU7	Q68FU7	COQ6_RAT	Coq6	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial	1	HNTALLAATDLLK	HNTALLAATDLLK	3	HNTALLAATDLLK3	6798.13	10156.9	11755.5
Q68FU7	Q68FU7	COQ6_RAT	Coq6	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial	1	HNTALLAATDLLKR	HNTALLAATDLLKR	3	HNTALLAATDLLKR3	1757.58	3440.17	
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	HNTGTDFSNSSIK	HNTGTDFSNSSIK	3	HNTGTDFSNSSIK3		2477.19	3538.38
G3V6N7	G3V6N7	G3V6N7_RAT	Slc12a6	Solute carrier family 12, member 6	1	HNTVVMGWPNGWR	HNTVVMGWPNGWR	3	HNTVVMGWPNGWR3	6635.65	11532.9	5893.77
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	HNTYGVDCEK	HNTYGVDC(UniMod:4)EK	2	HNTYGVDC(UniMod:4)EK2	1505.51		
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	HNTYLQECTGQR	HNTYLQEC(UniMod:4)TGQR	2	HNTYLQEC(UniMod:4)TGQR2	2102.75	4882.9	2181.81
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	HNTYLQECTGQR	HNTYLQEC(UniMod:4)TGQR	3	HNTYLQEC(UniMod:4)TGQR3	23120.3	22120	33272.3
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	HNVAAGGTHFGFWYR	HNVAAGGTHFGFWYR	3	HNVAAGGTHFGFWYR3	17755.5	25842.9	26920.2
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	HNVAAGGTHFGFWYR	HNVAAGGTHFGFWYR	4	HNVAAGGTHFGFWYR4	36909.2	28996.5	19044.5
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	HNVEVLGILSDDVETDSVAPGENLK	HNVEVLGILSDDVETDSVAPGENLK	3	HNVEVLGILSDDVETDSVAPGENLK3	95901	102699	120820
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	HNVFQNDEFDVFSR	HNVFQNDEFDVFSR	2	HNVFQNDEFDVFSR2	4569.32	8418.34	2178.43
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	HNVFQNDEFDVFSR	HNVFQNDEFDVFSR	3	HNVFQNDEFDVFSR3	31855	33044.8	25854.2
G3V6Q3	G3V6Q3	G3V6Q3_RAT	Wdr13	Uncharacterized protein	1	HNVHVMNISTGK	HNVHVMNISTGK	3	HNVHVMNISTGK3	15856.5	15884.9	12698.4
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	HNVLHLWPFTIHDLR	HNVLHLWPFTIHDLR	4	HNVLHLWPFTIHDLR4	4671.74	12281.4	10762.2
A0A0G2K8D1	A0A0G2K8D1	A0A0G2K8D1_RAT	Mospd2	Motile sperm domain containing 2	1	HNVVDETLK	HNVVDETLK	2	HNVVDETLK2	12023.6	14009.6	7299.09
Q5RKH9	A0A8I6AMZ8;A0A8I6AKN4;A0A8I6ASW5;Q5RKH9	Q5RKH9_RAT	Derl1	Derlin	0	HNWGQGFR	HNWGQGFR	2	HNWGQGFR2	103995	131714	111820
D3Z9C0	D3Z9C0	D3Z9C0_RAT	Mios	Meiosis regulator for oocyte development	1	HNWSGLDK	HNWSGLDK	2	HNWSGLDK2	5226.78	3450.52	
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	HNYEGTLR	HNYEGTLR	2	HNYEGTLR2	32605	44778.4	17300.1
A0A8I6GL10	A0A8I6GL10	A0A8I6GL10_RAT	Uchl5	Ubiquitin carboxyl-terminal hydrolase	1	HNYLPFIMELLK	HNYLPFIMELLK	3	HNYLPFIMELLK3	2769.4	2614.9	777.413
Q9QXY4	Q9QXY4	OGFR_RAT	Ogfr	Opioid growth factor receptor	1	HNYPDLTDQDCNGDMCNLSFYK	HNYPDLTDQDC(UniMod:4)NGDMC(UniMod:4)NLSFYK	3	HNYPDLTDQDC(UniMod:4)NGDMC(UniMod:4)NLSFYK3	2876.39	6196.61	3046.71
A0A096MJT6	A0A096MJT6	A0A096MJT6_RAT	Bltp1	Similar to RIKEN cDNA D630029K19	1	HPAAIVDDLHTK	HPAAIVDDLHTK	3	HPAAIVDDLHTK3		4932.54	8940.85
A0A8I5Y8H6	A0A8I5Y8H6	A0A8I5Y8H6_RAT	Psd3	Pleckstrin and Sec7 domain containing 3	1	HPAGFETPPER	HPAGFETPPER	3	HPAGFETPPER3	76275.4	80299.6	55307.4
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	HPAGGDYEEL	HPAGGDYEEL	2	HPAGGDYEEL2	8993.44	9406.68	16080.8
Q71UF4	Q71UF4	RBBP7_RAT	Rbbp7	Histone-binding protein RBBP7	1	HPAKPDPSGECNPDLR	HPAKPDPSGEC(UniMod:4)NPDLR	3	HPAKPDPSGEC(UniMod:4)NPDLR3	52143.2	10595.3	6063.22
Q71UF4	Q71UF4	RBBP7_RAT	Rbbp7	Histone-binding protein RBBP7	1	HPAKPDPSGECNPDLR	HPAKPDPSGEC(UniMod:4)NPDLR	4	HPAKPDPSGEC(UniMod:4)NPDLR4	18571	5074.81	3182.25
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	HPANVILDTGK	HPANVILDTGK	2	HPANVILDTGK2	3782.69	3319.54	5570.66
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	HPAPEYCNLQEGLPYLDMVVAETLR	HPAPEYC(UniMod:4)NLQEGLPYLDMVVAETLR	3	HPAPEYC(UniMod:4)NLQEGLPYLDMVVAETLR3	25447.7	22213	17749.2
A4V8B4	A4V8B4	SAV1_RAT	Sav1	Protein salvador homolog 1	1	HPCAPSVPR	HPC(UniMod:4)APSVPR	2	HPC(UniMod:4)APSVPR2	34501.3	25689.7	31142.6
B5DEP5	B5DEP5	B5DEP5_RAT	Trip4	Thyroid hormone receptor interactor 4	1	HPCDCLGQK	HPC(UniMod:4)DC(UniMod:4)LGQK	2	HPC(UniMod:4)DC(UniMod:4)LGQK2	16146.4		3674.69
D3ZSN4	D3ZSN4	D3ZSN4_RAT	Zfp330	Zinc finger protein 330	1	HPCNASMECDK	HPC(UniMod:4)NASMEC(UniMod:4)DK	2	HPC(UniMod:4)NASMEC(UniMod:4)DK2			10748.8
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	HPDADSLYVEK	HPDADSLYVEK	2	HPDADSLYVEK2	3080.05		
P63159	A0A8I6GBU6;A0A8I6GKR4;D3ZIU9;P63159;D3ZC69;A0A8I6GJ73;A0A8I6A2H1;A0A8I5Y7D7;A0A0G2K6P4;D3ZGW6	HMGB1_RAT	Hmgb1	High mobility group protein B1	0	HPDASVNFSEFSK	HPDASVNFSEFSK	3	HPDASVNFSEFSK3	13528.3		
P51635	P51635	AK1A1_RAT	Akr1a1	Aldo-keto reductase family 1 member A1	1	HPDEPVLLEEPVVLALAEK	HPDEPVLLEEPVVLALAEK	3	HPDEPVLLEEPVVLALAEK3	30004.2	26498.7	22845.8
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	HPDFADACGLMNNNIEEQR	HPDFADAC(UniMod:4)GLMNNNIEEQR	3	HPDFADAC(UniMod:4)GLMNNNIEEQR3	1263.9	3816.04	
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	HPDFADACGLMNNNIEEQRR	HPDFADAC(UniMod:4)GLMNNNIEEQRR	4	HPDFADAC(UniMod:4)GLMNNNIEEQRR4	24468	34528.1	40272.7
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	HPDLICHSLFLTGNNK	HPDLIC(UniMod:4)HSLFLTGNNK	3	HPDLIC(UniMod:4)HSLFLTGNNK3	7217.08	3355.93	6696.89
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	HPDLICHSLFLTGNNK	HPDLIC(UniMod:4)HSLFLTGNNK	4	HPDLIC(UniMod:4)HSLFLTGNNK4	3743.98	5892.33	5029.07
D3ZYS7	D3ZYS7	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	1	HPDSHQLFIGNLPHEVDK	HPDSHQLFIGNLPHEVDK	3	HPDSHQLFIGNLPHEVDK3	75736.8	46136.3	30225.5
D3ZYS7	D3ZYS7	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	1	HPDSHQLFIGNLPHEVDK	HPDSHQLFIGNLPHEVDK	4	HPDSHQLFIGNLPHEVDK4	417298	291120	191731
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	HPDVSMVDPEALAIEQNLGK	HPDVSMVDPEALAIEQNLGK	3	HPDVSMVDPEALAIEQNLGK3	4736.25		3824.81
P02770	P02770	ALBU_RAT	Alb	Albumin	1	HPDYSVSLLLR	HPDYSVSLLLR	2	HPDYSVSLLLR2	534780	375304	359861
P02770	P02770	ALBU_RAT	Alb	Albumin	1	HPDYSVSLLLR	HPDYSVSLLLR	3	HPDYSVSLLLR3	1.46221e+06	1.21079e+06	1.10486e+06
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	HPEAEMAQNSVR	HPEAEMAQNSVR	3	HPEAEMAQNSVR3	33469.6	25013.5	39284.7
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	HPECYVCTDCGINLK	HPEC(UniMod:4)YVC(UniMod:4)TDC(UniMod:4)GINLK	2	HPEC(UniMod:4)YVC(UniMod:4)TDC(UniMod:4)GINLK2	41707	24597.4	35419.9
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	HPECYVCTDCGINLK	HPEC(UniMod:4)YVC(UniMod:4)TDC(UniMod:4)GINLK	3	HPEC(UniMod:4)YVC(UniMod:4)TDC(UniMod:4)GINLK3	179322	167830	175836
A0A096MK61	A0A096MK61	A0A096MK61_RAT	Crtap	Cartilage associated protein-like 1	1	HPEDEMMK	HPEDEMMK	2	HPEDEMMK2	2997.81		
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	HPEELSLLR	HPEELSLLR	2	HPEELSLLR2	714451	720640	711113
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	HPEGIVSEVEMLSSQER	HPEGIVSEVEMLSSQER	3	HPEGIVSEVEMLSSQER3	30056.9	10926.3	34467.3
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	HPELFEALGIAQPK	HPELFEALGIAQPK	2	HPELFEALGIAQPK2	7334.14	5020.19	6417.86
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	HPELFEALGIAQPK	HPELFEALGIAQPK	3	HPELFEALGIAQPK3	95316.4	65036.4	64476.2
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	HPELQNCGSLCGLQADNTLELVGLR	HPELQNC(UniMod:4)GSLC(UniMod:4)GLQADNTLELVGLR	3	HPELQNC(UniMod:4)GSLC(UniMod:4)GLQADNTLELVGLR3	26708.1	14857.5	26083
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	HPEPSPFVGNLMFFR	HPEPSPFVGNLMFFR	2	HPEPSPFVGNLMFFR2	23335.2	21680	17234.1
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	HPEPSPFVGNLMFFR	HPEPSPFVGNLMFFR	3	HPEPSPFVGNLMFFR3	37369.8	43601.8	54155.2
Q9Z0W7	Q9Z0W7	CLIC4_RAT	Clic4	Chloride intracellular channel protein 4	1	HPESNTAGMDIFAK	HPESNTAGMDIFAK	2	HPESNTAGMDIFAK2	21373.2	30205.9	24131.8
Q9Z0W7	Q9Z0W7	CLIC4_RAT	Clic4	Chloride intracellular channel protein 4	1	HPESNTAGMDIFAK	HPESNTAGMDIFAK	3	HPESNTAGMDIFAK3	97089.3	104521	104675
Q68FX0	Q68FX0	IDH3B_RAT	Idh3B	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	HPFAQAVGR	HPFAQAVGR	2	HPFAQAVGR2	144779	130979	80547.2
Q6UPR8	Q6UPR8	ERMP1_RAT	Ermp1	Endoplasmic reticulum metallopeptidase 1	1	HPFASVVAQEVFQSGIIPSDTDFR	HPFASVVAQEVFQSGIIPSDTDFR	3	HPFASVVAQEVFQSGIIPSDTDFR3	25776	17229.7	23313.1
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	HPFFSGIDWDNIR	HPFFSGIDWDNIR	3	HPFFSGIDWDNIR3	6103.96	3114.66	5037.8
Q5FWS5	Q5FWS5	Q5FWS5_RAT	Loxl1	Lysyl oxidase homolog	1	HPFGFGQVPDNWR	HPFGFGQVPDNWR	2	HPFGFGQVPDNWR2	13693	15856.5	10818.5
Q5FWS5	Q5FWS5	Q5FWS5_RAT	Loxl1	Lysyl oxidase homolog	1	HPFGFGQVPDNWR	HPFGFGQVPDNWR	3	HPFGFGQVPDNWR3	197086	248409	210814
Q5XIC1	Q5XIC1	GMPPA_RAT	Gmppa	Mannose-1-phosphate guanyltransferase alpha	1	HPFLLLGTTANR	HPFLLLGTTANR	3	HPFLLLGTTANR3	4955.49	5773.93	7609.36
P47196	P47196;P47197	AKT1_RAT	Akt1	RAC-alpha serine/threonine-protein kinase	0	HPFLTALK	HPFLTALK	2	HPFLTALK2	11040.6	21349.7	12209.8
Q63484	Q63484	AKT3_RAT	Akt3	RAC-gamma serine/threonine-protein kinase	1	HPFLTSLK	HPFLTSLK	2	HPFLTSLK2	13304.3	2517.85	4634.52
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	HPFMGDTCTVK	HPFMGDTC(UniMod:4)TVK	2	HPFMGDTC(UniMod:4)TVK2	1.0173e+06	969309	1.0594e+06
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	HPFMGDTCTVK	HPFMGDTC(UniMod:4)TVK	3	HPFMGDTC(UniMod:4)TVK3	132224	137469	129598
Q4V7C6	Q4V7C6	GUAA_RAT	Gmps	GMP synthase [glutamine-hydrolyzing]	1	HPFPGPGLAIR	HPFPGPGLAIR	2	HPFPGPGLAIR2	5708.41		
Q4V7C6	Q4V7C6	GUAA_RAT	Gmps	GMP synthase [glutamine-hydrolyzing]	1	HPFPGPGLAIR	HPFPGPGLAIR	3	HPFPGPGLAIR3	10385.4	2789.31	2029.35
Q05764	Q05764	ADDB_RAT	Add2	Beta-adducin	1	HPFVQEK	HPFVQEK	2	HPFVQEK2		5409.39	
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	HPGASGLPAPSAQFPR	HPGASGLPAPSAQFPR	2	HPGASGLPAPSAQFPR2	17583.4	4711.59	12987.7
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	HPGASGLPAPSAQFPR	HPGASGLPAPSAQFPR	3	HPGASGLPAPSAQFPR3	200509	156459	166872
P41243	P41243	MATK_RAT	Matk	Megakaryocyte-associated tyrosine-protein kinase	1	HPGDYVLCVSFGR	HPGDYVLC(UniMod:4)VSFGR	3	HPGDYVLC(UniMod:4)VSFGR3	8911.49	6596.85	6861.27
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	HPGEVCGPTQFQCVSTNR	HPGEVC(UniMod:4)GPTQFQC(UniMod:4)VSTNR	3	HPGEVC(UniMod:4)GPTQFQC(UniMod:4)VSTNR3	8360.58	15144.1	8304.22
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	HPGHYAVYNLSPR	HPGHYAVYNLSPR	2	HPGHYAVYNLSPR2	4915.5	3501.91	
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	HPGHYAVYNLSPR	HPGHYAVYNLSPR	3	HPGHYAVYNLSPR3	41869.2	43280.2	42032.7
P62703	D3ZX01;P62703	RS4X_RAT	Rps4x	Small ribosomal subunit protein eS4	0	HPGSFDVVHVK	HPGSFDVVHVK	2	HPGSFDVVHVK2	15205.5	742.346	
P62703	D3ZX01;P62703	RS4X_RAT	Rps4x	Small ribosomal subunit protein eS4	0	HPGSFDVVHVK	HPGSFDVVHVK	3	HPGSFDVVHVK3	173449	36355.7	14751.3
Q8CIZ5	F1LVL9;Q8CIZ5	DMBT1_RAT	Dmbt1	Deleted in malignant brain tumors 1 protein	0	HPGWLVHNCR	HPGWLVHNC(UniMod:4)R	2	HPGWLVHNC(UniMod:4)R2	112641	129534	51791.2
Q8CIZ5	F1LVL9;Q8CIZ5	DMBT1_RAT	Dmbt1	Deleted in malignant brain tumors 1 protein	0	HPGWLVHNCR	HPGWLVHNC(UniMod:4)R	3	HPGWLVHNC(UniMod:4)R3	804893	1.19656e+06	1.25109e+06
P23358	A0A8I5XWB0;P23358;A0A8I6A1H0	RL12_RAT	Rpl12	Large ribosomal subunit protein uL11	0	HPHDIIDDINSGAVECPAS	HPHDIIDDINSGAVEC(UniMod:4)PAS	3	HPHDIIDDINSGAVEC(UniMod:4)PAS3	63690.1	12503.9	17215.5
G3V8L0	G3V8L0	G3V8L0_RAT	Wdr24	GATOR complex protein WDR24	1	HPHDPSFLLSGSK	HPHDPSFLLSGSK	3	HPHDPSFLLSGSK3	7802.35	7482.8	3429.8
Q4QQR9	Q4QQR9	MEMO1_RAT	Memo1	Protein MEMO1	1	HPIGVLLNAITELQK	HPIGVLLNAITELQK	3	HPIGVLLNAITELQK3	9732.17	8886.87	9830.7
Q9ET64	Q9ET64	NSMA_RAT	Smpd2	Sphingomyelin phosphodiesterase 2	1	HPIQEIVQHVYTLNGYPYK	HPIQEIVQHVYTLNGYPYK	3	HPIQEIVQHVYTLNGYPYK3	3000.72	4521.64	3257.09
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	HPITNAIDGK	HPITNAIDGK	2	HPITNAIDGK2	51885.2	44351.6	35386.1
P10252	P10252	CD48_RAT	Cd48	CD48 antigen	1	HPLASYQR	HPLASYQR	2	HPLASYQR2	661294	602495	607254
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	HPLDEVNLASCQLDPAGLHTLMPVLLR	HPLDEVNLASC(UniMod:4)QLDPAGLHTLMPVLLR	4	HPLDEVNLASC(UniMod:4)QLDPAGLHTLMPVLLR4	126015	210854	117373
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	HPLLHIQK	HPLLHIQK	2	HPLLHIQK2	26343.5	22874.1	6298.56
A0A0G2K712	A0A0G2K712	A0A0G2K712_RAT	Tbc1d5	TBC1 domain family, member 5	1	HPLQSEEQEVGIDPLFSYSNKPR	HPLQSEEQEVGIDPLFSYSNKPR	4	HPLQSEEQEVGIDPLFSYSNKPR4	6943.52	7764.04	4745.92
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	HPNGTQETILLNHTFNETQIEWFR	HPNGTQETILLNHTFNETQIEWFR	4	HPNGTQETILLNHTFNETQIEWFR4		10536.4	
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	HPNILAYIDGLETEK	HPNILAYIDGLETEK	2	HPNILAYIDGLETEK2			6125.31
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	HPNILAYIDGLETEK	HPNILAYIDGLETEK	3	HPNILAYIDGLETEK3	65520.4	65190.5	48555.1
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	HPNTIEYK	HPNTIEYK	2	HPNTIEYK2	83325.1	77987.8	65199.8
A0A8I6A6V7	A0A8I6A6V7	A0A8I6A6V7_RAT	LOC120099313	High mobility group protein B4-like	1	HPNWAVAQVAK	HPNWAVAQVAK	3	HPNWAVAQVAK3		17067.9	
P00762	P00762	TRY1_RAT	Prss1	Serine protease 1	1	HPNYSSWTLNNDIMLIK	HPNYSSWTLNNDIMLIK	3	HPNYSSWTLNNDIMLIK3	24278.4	18622.3	19355.7
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	HPPEASVQIHQVSR	HPPEASVQIHQVSR	2	HPPEASVQIHQVSR2	20108.2		
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	HPPEASVQIHQVSR	HPPEASVQIHQVSR	3	HPPEASVQIHQVSR3	241877	188830	214166
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	HPPEASVQIHQVSR	HPPEASVQIHQVSR	4	HPPEASVQIHQVSR4	23932.2	22634.6	20408
P07151	P07151	B2MG_RAT	B2m	Beta-2-microglobulin	1	HPPENGKPNFLNCYVSQFHPPQIEIELLK	HPPENGKPNFLNC(UniMod:4)YVSQFHPPQIEIELLK	4	HPPENGKPNFLNC(UniMod:4)YVSQFHPPQIEIELLK4	52154.7	46463.9	30239.4
A0A8I6GFC7	A0A8I6GFC7	A0A8I6GFC7_RAT	Ubp1	Upstream binding protein 1	1	HPPFQYVMCAATSPAVK	HPPFQYVMC(UniMod:4)AATSPAVK	3	HPPFQYVMC(UniMod:4)AATSPAVK3	4122.76	3099.36	6043.04
A0A0G2K089	A0A0G2K089	A0A0G2K089_RAT	Dennd4c	DENN domain containing 4C	1	HPPGSGITNSPALMAK	HPPGSGITNSPALMAK	3	HPPGSGITNSPALMAK3	2954.62	2671.94	1451.28
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	HPPHTELLDLQPLPVTALGCK	HPPHTELLDLQPLPVTALGC(UniMod:4)K	3	HPPHTELLDLQPLPVTALGC(UniMod:4)K3	11565.8		7238.11
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	HPPHTELLDLQPLPVTALGCK	HPPHTELLDLQPLPVTALGC(UniMod:4)K	4	HPPHTELLDLQPLPVTALGC(UniMod:4)K4	21486	21027.4	16631.3
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	HPPVAVLPLGTGNDLAR	HPPVAVLPLGTGNDLAR	2	HPPVAVLPLGTGNDLAR2	9179.88	6344.06	
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	HPPVAVLPLGTGNDLAR	HPPVAVLPLGTGNDLAR	3	HPPVAVLPLGTGNDLAR3	43301.3	43362.9	37988.8
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	HPPVFGLCR	HPPVFGLC(UniMod:4)R	2	HPPVFGLC(UniMod:4)R2	2.73382e+06	2.4665e+06	2.42104e+06
B1H282	B1H282	B1H282_RAT	Colgalt1	Collagen beta(1-O)galactosyltransferase 1	1	HPPVQLSR	HPPVQLSR	2	HPPVQLSR2	15347.7	13500.8	21428.3
Q675A5	Q675A5	PAG15_RAT	Pla2g15	Phospholipase A2 group XV	1	HPPVVLVPGDLGNQLEAK	HPPVVLVPGDLGNQLEAK	3	HPPVVLVPGDLGNQLEAK3	7660.69	9048.3	10152.8
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	HPQLDFVFTLAQNLK	HPQLDFVFTLAQNLK	2	HPQLDFVFTLAQNLK2	21225.2	23290.7	16281.1
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	HPQLDFVFTLAQNLK	HPQLDFVFTLAQNLK	3	HPQLDFVFTLAQNLK3	147626	114701	139586
D4A4P4	D4A4P4	D4A4P4_RAT	Flad1	FAD synthase	1	HPQLEAVLMGTR	HPQLEAVLMGTR	3	HPQLEAVLMGTR3	13718.8	8637.66	8387.74
P10760	P10760	SAHH_RAT	Ahcy	Adenosylhomocysteinase	1	HPQLLSGIR	HPQLLSGIR	2	HPQLLSGIR2	8764.68	8863.25	17742
P97633	P97633	KC1A_RAT	Csnk1a1	Casein kinase I isoform alpha	1	HPQLLYESK	HPQLLYESK	2	HPQLLYESK2	4703.28		1153.33
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	HPQPFLR	HPQPFLR	2	HPQPFLR2	15171.6	7713.38	24568.9
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	HPQPGAVELAAK	HPQPGAVELAAK	2	HPQPGAVELAAK2	25422.4	22031.2	16146
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	HPQPGAVELAAK	HPQPGAVELAAK	3	HPQPGAVELAAK3	22329.4	21071.2	28509.8
Q499N5	Q499N5	ACSF2_RAT	Acsf2	Medium-chain acyl-CoA ligase ACSF2, mitochondrial	1	HPQVQEAQVVGVK	HPQVQEAQVVGVK	3	HPQVQEAQVVGVK3	1743.72	7205.98	22345
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	HPSAVTACNLDLENLITDSNR	HPSAVTAC(UniMod:4)NLDLENLITDSNR	3	HPSAVTAC(UniMod:4)NLDLENLITDSNR3	110847	122670	101253
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	HPSAVTACNLDLENLVTDSNR	HPSAVTAC(UniMod:4)NLDLENLVTDSNR	3	HPSAVTAC(UniMod:4)NLDLENLVTDSNR3	96140.8	99985.2	96590.3
B5DFB2	B5DFB2	B5DFB2_RAT	Rbbp4	RB binding protein 4, chromatin remodeling factor	1	HPSKPDPSGECNPDLR	HPSKPDPSGEC(UniMod:4)NPDLR	3	HPSKPDPSGEC(UniMod:4)NPDLR3	11518.5	5716.27	4028.5
B5DFB2	B5DFB2	B5DFB2_RAT	Rbbp4	RB binding protein 4, chromatin remodeling factor	1	HPSKPDPSGECNPDLR	HPSKPDPSGEC(UniMod:4)NPDLR	4	HPSKPDPSGEC(UniMod:4)NPDLR4	28108.6		5206.08
A0A8I5ZLY7	A0A8I5ZLY7	A0A8I5ZLY7_RAT	Tapbp	TAP binding protein	1	HPSLPSSGR	HPSLPSSGR	2	HPSLPSSGR2	100293	65855.7	86984.8
P97526	P97526	NF1_RAT	Nf1	Neurofibromin	1	HPSPAIVAR	HPSPAIVAR	2	HPSPAIVAR2	515.344	1272.14	
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	HPSPELSR	HPSPELSR	2	HPSPELSR2		10950.1	
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	HPSSDSVAQTPELLR	HPSSDSVAQTPELLR	3	HPSSDSVAQTPELLR3	7309.74	11285.2	5960.03
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	HPSVNENFCNEK	HPSVNENFC(UniMod:4)NEK	3	HPSVNENFC(UniMod:4)NEK3	4158.07	2164.2	7242.72
A0A8I6A678	A0A8I6A678	A0A8I6A678_RAT	Snx2	Sorting nexin-2	1	HPTLLQDPDLR	HPTLLQDPDLR	2	HPTLLQDPDLR2	7853.05	7169.81	7846.02
A0A8I6A678	A0A8I6A678	A0A8I6A678_RAT	Snx2	Sorting nexin-2	1	HPTLLQDPDLR	HPTLLQDPDLR	3	HPTLLQDPDLR3	35505.9	50751.3	43718.2
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	HPTPLALGQFHTVTLLR	HPTPLALGQFHTVTLLR	3	HPTPLALGQFHTVTLLR3		14422	
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	HPTPLALGQFHTVTLLR	HPTPLALGQFHTVTLLR	4	HPTPLALGQFHTVTLLR4	2408.51	3227.67	1125.12
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	HPTVLQNTDGK	HPTVLQNTDGK	2	HPTVLQNTDGK2	85488.2	58860.4	31558.4
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	HPTVLQNTDGK	HPTVLQNTDGK	3	HPTVLQNTDGK3	12755.5	9064.85	7518.01
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	HPTVLQNTDGKNPESWAK	HPTVLQNTDGKNPESWAK	3	HPTVLQNTDGKNPESWAK3	59260.2	64976.9	68248
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	HPTVLQNTDGKNPESWAK	HPTVLQNTDGKNPESWAK	4	HPTVLQNTDGKNPESWAK4	23919.1	29700.7	24957.3
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	HPTYCYEMNMVVLSAPAVESELSPR	HPTYC(UniMod:4)YEMNMVVLSAPAVESELSPR	3	HPTYC(UniMod:4)YEMNMVVLSAPAVESELSPR3	597371	344513	268280
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	HPTYCYEMNMVVLSAPAVESELSPR	HPTYC(UniMod:4)YEMNMVVLSAPAVESELSPR	4	HPTYC(UniMod:4)YEMNMVVLSAPAVESELSPR4	15689.6	12439.6	8844.23
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	HPVDQVQR	HPVDQVQR	2	HPVDQVQR2			339141
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	HPVGSHQVPGLHSGVVTTPGSPSLGR	HPVGSHQVPGLHSGVVTTPGSPSLGR	4	HPVGSHQVPGLHSGVVTTPGSPSLGR4	13133.7	21094.1	11313.1
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	HPVHQDFLGFYVVDSHR	HPVHQDFLGFYVVDSHR	3	HPVHQDFLGFYVVDSHR3	32425.5	18060.9	18820.9
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	HPVHQDFLGFYVVDSHR	HPVHQDFLGFYVVDSHR	4	HPVHQDFLGFYVVDSHR4	197489	167231	161176
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	HPVIGVHVR	HPVIGVHVR	2	HPVIGVHVR2	3604.14	3947.41	4692.71
B5DFH4	B5DFH4	B5DFH4_RAT	Papss2	3'-phosphoadenosine 5'-phosphosulfate synthase 2	1	HPVLLLHPLGGWTK	HPVLLLHPLGGWTK	3	HPVLLLHPLGGWTK3	8863.01		
F1LMQ3	F1LMQ3	F1LMQ3_RAT	Psmd8	26S proteasome non-ATPase regulatory subunit 8	1	HPVSLEQYLMEGSYNK	HPVSLEQYLMEGSYNK	2	HPVSLEQYLMEGSYNK2	21604.4	12077.2	17524.5
F1LMQ3	F1LMQ3	F1LMQ3_RAT	Psmd8	26S proteasome non-ATPase regulatory subunit 8	1	HPVSLEQYLMEGSYNK	HPVSLEQYLMEGSYNK	3	HPVSLEQYLMEGSYNK3	37422.9	28822.5	40388.8
D4A3T4	D4A3T4	D4A3T4_RAT	Zfyve1	Zinc finger FYVE-type containing 1	1	HPVTVYHVSK	HPVTVYHVSK	3	HPVTVYHVSK3	3132.12		2947.33
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	HPVVSESEVFQQFLNFR	HPVVSESEVFQQFLNFR	3	HPVVSESEVFQQFLNFR3	17069.8	18295.4	31580.4
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	HPVVSESEVFQQFLNFRDEK	HPVVSESEVFQQFLNFRDEK	3	HPVVSESEVFQQFLNFRDEK3	3535.72	5278.89	1480.53
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	HPVVSESEVFQQFLNFRDEK	HPVVSESEVFQQFLNFRDEK	4	HPVVSESEVFQQFLNFRDEK4	15544.3	6308.05	14915.4
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	HPWDDISYVLPEHMSM	HPWDDISYVLPEHMSM	2	HPWDDISYVLPEHMSM2	4976.79	8688.43	7488.53
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	HPWDDISYVLPEHMSM	HPWDDISYVLPEHMSM	3	HPWDDISYVLPEHMSM3	14914.7	20438.6	22940.6
A0A8I6AUH0	A0A8I6AUH0	A0A8I6AUH0_RAT	Camk1d	Calcium/calmodulin-dependent protein kinase ID	1	HPWIAGDTALSK	HPWIAGDTALSK	3	HPWIAGDTALSK3		1089.66	2560.12
D3Z8E0	D3Z8E0	D3Z8E0_RAT	Rps6ka3	Ribosomal protein S6 kinase	1	HPWIVHWDQLPQYQLNR	HPWIVHWDQLPQYQLNR	3	HPWIVHWDQLPQYQLNR3	5790.42		
P11730	P08413;P11730	KCC2G_RAT	Camk2g	Calcium/calmodulin-dependent protein kinase type II subunit gamma	0	HPWVCQR	HPWVC(UniMod:4)QR	2	HPWVC(UniMod:4)QR2	47516.8	31199	36919.1
Q62885	Q62885	U119A_RAT	Unc119	Protein unc-119 homolog A	1	HPYETQSDSFYFVDDR	HPYETQSDSFYFVDDR	3	HPYETQSDSFYFVDDR3	6189.73		4026.31
P02770	P02770	ALBU_RAT	Alb	Albumin	1	HPYFYAPELLYYAEK	HPYFYAPELLYYAEK	2	HPYFYAPELLYYAEK2	589446	469391	480989
P02770	P02770	ALBU_RAT	Alb	Albumin	1	HPYFYAPELLYYAEK	HPYFYAPELLYYAEK	3	HPYFYAPELLYYAEK3	3.95626e+06	4.01161e+06	3.99509e+06
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	HPYNNNTSFEDK	HPYNNNTSFEDK	2	HPYNNNTSFEDK2	4737.57	8541.49	9058.43
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	HPYNNNTSFEDK	HPYNNNTSFEDK	3	HPYNNNTSFEDK3	18580.3	11831.4	14142.4
Q9R0J8	Q9R0J8	LGMN_RAT	Lgmn	Legumain	1	HQADACHAYQIIHR	HQADAC(UniMod:4)HAYQIIHR	3	HQADAC(UniMod:4)HAYQIIHR3	1913.34	2345.65	
Q9R0J8	Q9R0J8	LGMN_RAT	Lgmn	Legumain	1	HQADACHAYQIIHR	HQADAC(UniMod:4)HAYQIIHR	4	HQADAC(UniMod:4)HAYQIIHR4	19473.7	13510.5	6392.39
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	HQAECALNER	HQAEC(UniMod:4)ALNER	2	HQAEC(UniMod:4)ALNER2	42827.6	41333.1	35697.9
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	HQAECALNER	HQAEC(UniMod:4)ALNER	3	HQAEC(UniMod:4)ALNER3	87058.9	84365	91600.2
B2RZ33	B2RZ33	B2RZ33_RAT	Nck1	Cytoplasmic protein	1	HQAEMALNER	HQAEMALNER	2	HQAEMALNER2	3951.45	3795.67	4483.79
B2RZ33	B2RZ33	B2RZ33_RAT	Nck1	Cytoplasmic protein	1	HQAEMALNER	HQAEMALNER	3	HQAEMALNER3	10020.6	11319	8199.98
Q3KR57	Q3KR57	Q3KR57_RAT	Grap2	GRB2-related adaptor protein 2	1	HQAENLLMGK	HQAENLLMGK	2	HQAENLLMGK2	3183.95	3869.93	
P97686	P97686	NRCAM_RAT	Nrcam	Neuronal cell adhesion molecule	1	HQAEVSGTQTTAQLK	HQAEVSGTQTTAQLK	3	HQAEVSGTQTTAQLK3		1649.3	
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	HQAFEAELHANADR	HQAFEAELHANADR	2	HQAFEAELHANADR2	20314	17687.6	10359.9
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	HQAFEAELHANADR	HQAFEAELHANADR	3	HQAFEAELHANADR3	160923	157428	174661
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	HQAFEAELHANADR	HQAFEAELHANADR	4	HQAFEAELHANADR4	50824	57604.2	58637.3
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	HQAFEAELSANQSR	HQAFEAELSANQSR	2	HQAFEAELSANQSR2	16337.6	26801.2	29289.6
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	HQAFEAELSANQSR	HQAFEAELSANQSR	3	HQAFEAELSANQSR3	145692	162883	183499
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	HQAFEAEVQANSGAIVK	HQAFEAEVQANSGAIVK	2	HQAFEAEVQANSGAIVK2	13511.3	6419.94	8031.33
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	HQAFEAEVQANSGAIVK	HQAFEAEVQANSGAIVK	3	HQAFEAEVQANSGAIVK3	133973	177877	152185
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	HQAFMAELASHQGWLENIVAEGR	HQAFMAELASHQGWLENIVAEGR	3	HQAFMAELASHQGWLENIVAEGR3	13875.6	19802.3	10208.7
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	HQAFMAELASHQGWLENIVAEGR	HQAFMAELASHQGWLENIVAEGR	4	HQAFMAELASHQGWLENIVAEGR4	40788.3	58533.9	46028
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	HQAFMAELASNK	HQAFMAELASNK	2	HQAFMAELASNK2	91257.8	79910.5	87734.4
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	HQAFMAELASNK	HQAFMAELASNK	3	HQAFMAELASNK3	390240	8348.41	468321
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	HQAFMAELASNKEWLDK	HQAFMAELASNKEWLDK	3	HQAFMAELASNKEWLDK3	16420.4	14005.4	12435.4
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	HQAFMAELASNKEWLDK	HQAFMAELASNKEWLDK	4	HQAFMAELASNKEWLDK4			6311.46
Q9Z118	Q9Z118	PTBP3_RAT	Ptbp3	Polypyrimidine tract-binding protein 3	1	HQAVQLPR	HQAVQLPR	2	HQAVQLPR2	10572.9	7697.33	7901.01
P08460	P08460	NID1_RAT	Nid1	Nidogen-1 (Fragment)	1	HQCSVHAECR	HQC(UniMod:4)SVHAEC(UniMod:4)R	2	HQC(UniMod:4)SVHAEC(UniMod:4)R2			13988.8
P08460	P08460	NID1_RAT	Nid1	Nidogen-1 (Fragment)	1	HQCSVHAECR	HQC(UniMod:4)SVHAEC(UniMod:4)R	3	HQC(UniMod:4)SVHAEC(UniMod:4)R3			108647
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	HQDASCLPALK	HQDASC(UniMod:4)LPALK	3	HQDASC(UniMod:4)LPALK3	30132.3		26520.3
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	HQDCLVTTLQIQQGVVR	HQDC(UniMod:4)LVTTLQIQQGVVR	3	HQDC(UniMod:4)LVTTLQIQQGVVR3	5674.71	2829.53	4195.82
D3ZYT8	D3ZYT8	D3ZYT8_RAT	Pikfyve	1-phosphatidylinositol-3-phosphate 5-kinase	1	HQDDDMDIR	HQDDDMDIR	2	HQDDDMDIR2	1579.17	5237	
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	HQDGLPYIDDSPSSSPHLSSK	HQDGLPYIDDSPSSSPHLSSK	4	HQDGLPYIDDSPSSSPHLSSK4		12757.1	20207
D3ZEF9	D3ZEF9	D3ZEF9_RAT	B3gnt2	Hexosyltransferase	1	HQDILMWNYR	HQDILMWNYR	3	HQDILMWNYR3	12818.3	9222.57	19416
O88902	O88902	PTN23_RAT	Ptpn23	Tyrosine-protein phosphatase non-receptor type 23 (Fragment)	1	HQDVMPYDSNR	HQDVMPYDSNR	3	HQDVMPYDSNR3	7465.38	6757.44	9548.54
A0A0G2JXD9	A0A0G2JXD9	A0A0G2JXD9_RAT	Dop1b	DOP1 leucine zipper like protein B	1	HQEALIGQSFYGK	HQEALIGQSFYGK	3	HQEALIGQSFYGK3	6710.29	5598.36	8230.31
A0A8I6AD03	A0A8I6AD03	A0A8I6AD03_RAT	Aplp1	Amyloid beta precursor like protein 1	1	HQEAQEACSSQGLILHGSGMLLPCGSDR	HQEAQEAC(UniMod:4)SSQGLILHGSGMLLPC(UniMod:4)GSDR	4	HQEAQEAC(UniMod:4)SSQGLILHGSGMLLPC(UniMod:4)GSDR4	8600.18	5803.57	6026.92
D3ZFK6	D3ZFK6	D3ZFK6_RAT	Atg16l1	Autophagy related 16-like 1	1	HQEELTELHK	HQEELTELHK	3	HQEELTELHK3	13020.8	6053.75	8365.45
D3ZFK6	D3ZFK6	D3ZFK6_RAT	Atg16l1	Autophagy related 16-like 1	1	HQEELTELHKK	HQEELTELHKK	3	HQEELTELHKK3	6606.4	3315.89	4771.52
P21533	A0A0G2KBA1;P21533	RL6_RAT	Rpl6	Large ribosomal subunit protein eL6	0	HQEGEIFDTEK	HQEGEIFDTEK	2	HQEGEIFDTEK2	3851.76	1372.42	
P21533	A0A0G2KBA1;P21533	RL6_RAT	Rpl6	Large ribosomal subunit protein eL6	0	HQEGEIFDTEK	HQEGEIFDTEK	3	HQEGEIFDTEK3	13809.1	3337.51	
P21533	A0A0G2KBA1;P21533	RL6_RAT	Rpl6	Large ribosomal subunit protein eL6	0	HQEGEIFDTEKEK	HQEGEIFDTEKEK	3	HQEGEIFDTEKEK3	44302.8	49017.3	46578.9
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	HQEHYDDIK	HQEHYDDIK	2	HQEHYDDIK2	1786.41		3377.59
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	HQEHYDDIK	HQEHYDDIK	3	HQEHYDDIK3	12473.2		11872.1
Q5BK57	Q5BK57	HAUS8_RAT	Haus8	HAUS augmin-like complex subunit 8	1	HQELAAALDAQTEVLSPLPPVLER	HQELAAALDAQTEVLSPLPPVLER	3	HQELAAALDAQTEVLSPLPPVLER3	1495.31	2265.32	3065.66
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	HQELDTLK	HQELDTLK	2	HQELDTLK2	8025.36	12728.8	8825.29
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	HQEQHNIPFPCLLAGGLLTYK	HQEQHNIPFPC(UniMod:4)LLAGGLLTYK	3	HQEQHNIPFPC(UniMod:4)LLAGGLLTYK3	6034.07	13997.8	7180.61
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	HQEQHNIPFPCLLAGGLLTYK	HQEQHNIPFPC(UniMod:4)LLAGGLLTYK	4	HQEQHNIPFPC(UniMod:4)LLAGGLLTYK4	12566.2	11211.1	19000.5
Q8K1P7	A0A8I6ARN7;Q8K1P7	SMCA4_RAT	Smarca4	Transcription activator BRG1	0	HQEYLNSILQHAK	HQEYLNSILQHAK	3	HQEYLNSILQHAK3	12286.9	3076.56	
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	HQFLAEILQWR	HQFLAEILQWR	3	HQFLAEILQWR3	4059.28	6775.32	12466.4
F7FG68	F7FG68	F7FG68_RAT	Syvn1	Synoviolin 1	1	HQFYPTVVYLTK	HQFYPTVVYLTK	3	HQFYPTVVYLTK3	5252.3	5753.48	
Q5U2X5	Q5U2X5	ACK1_RAT	Tnk2	Activated CDC42 kinase 1	1	HQGHFLLGTLSR	HQGHFLLGTLSR	3	HQGHFLLGTLSR3	7457.67	6415.73	5846.07
B0BNI6	B0BNI6	B0BNI6_RAT	Slc25a35	Solute carrier family 25, member 35	1	HQGMFQALTEIGQK	HQGMFQALTEIGQK	3	HQGMFQALTEIGQK3	8250.78	5972.1	11482.7
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	HQGSELHFPSVQPSDAGVYICTCR	HQGSELHFPSVQPSDAGVYIC(UniMod:4)TC(UniMod:4)R	3	HQGSELHFPSVQPSDAGVYIC(UniMod:4)TC(UniMod:4)R3	9085.87	8785.24	6587.6
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	HQGSELHFPSVQPSDAGVYICTCR	HQGSELHFPSVQPSDAGVYIC(UniMod:4)TC(UniMod:4)R	4	HQGSELHFPSVQPSDAGVYIC(UniMod:4)TC(UniMod:4)R4	48253.1	54707.7	25128.4
Q9WUD2	Q9WUD2	TRPV2_RAT	Trpv2	Transient receptor potential cation channel subfamily V member 2	1	HQGTCFYFGELPLSLAACTK	HQGTC(UniMod:4)FYFGELPLSLAAC(UniMod:4)TK	3	HQGTC(UniMod:4)FYFGELPLSLAAC(UniMod:4)TK3	20039.9	12564	31776.6
P68136	P60711;P63259;D3ZRN3;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	HQGVMVGMGQK	HQGVMVGMGQK	2	HQGVMVGMGQK2	6.18324e+06	5.67759e+06	5.20582e+06
P68136	P60711;P63259;D3ZRN3;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	HQGVMVGMGQK	HQGVMVGMGQK	3	HQGVMVGMGQK3	248069	280689	347394
P68136	P60711;P63259;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	HQGVMVGMGQKDSYVGDEAQSK	HQGVMVGMGQKDSYVGDEAQSK	4	HQGVMVGMGQKDSYVGDEAQSK4	14693.9	17019.4	24406.1
P68136	P60711;P63259;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	HQGVMVGMGQKDSYVGDEAQSKR	HQGVMVGMGQKDSYVGDEAQSKR	4	HQGVMVGMGQKDSYVGDEAQSKR4	2547.33	8653.14	6588.56
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	HQICPELELEASWPTHPHQDGK	HQIC(UniMod:4)PELELEASWPTHPHQDGK	4	HQIC(UniMod:4)PELELEASWPTHPHQDGK4	24393.5	17259.4	30184.4
P51111	P51111	HD_RAT	Htt	Huntingtin	1	HQIEEEFDRR	HQIEEEFDRR	3	HQIEEEFDRR3	39466.3	59294.1	21282.2
A0A8I6AJP4	A0A8I6AJP4	A0A8I6AJP4_RAT	Phactr4	Phosphatase and actin regulator 4	1	HQIGNTLIR	HQIGNTLIR	2	HQIGNTLIR2	34280.7		21328.3
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	HQILEQAVEDYAETVHQLSK	HQILEQAVEDYAETVHQLSK	3	HQILEQAVEDYAETVHQLSK3	336272	351878	347692
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	HQILEQAVEDYAETVHQLSK	HQILEQAVEDYAETVHQLSK	4	HQILEQAVEDYAETVHQLSK4	228482	252740	237542
Q9Z158	Q9Z158	STX17_RAT	Stx17	Syntaxin-17	1	HQINIEK	HQINIEK	2	HQINIEK2	8709.06	5842.38	4384.56
B2RYA6	B2RYA6	B2RYA6_RAT	Prcc	Proline rich mitotic checkpoint control factor	1	HQITYLIHQAK	HQITYLIHQAK	3	HQITYLIHQAK3	3723.19		
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	HQIVEVAGDDK	HQIVEVAGDDK	2	HQIVEVAGDDK2	80166	66519.5	79847.3
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	HQIVEVAGDDKYGR	HQIVEVAGDDKYGR	3	HQIVEVAGDDKYGR3	6470.99	6186.52	3957.82
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	HQIVEVAGDDKYGRK	HQIVEVAGDDKYGRK	4	HQIVEVAGDDKYGRK4	13230	13795.5	7488.29
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	HQIVGSR	HQIVGSR	2	HQIVGSR2			45435.8
Q9WTT7	Q9WTT7	5MP1_RAT	Bzw2	eIF5-mimic protein 1	1	HQKPVLTGQR	HQKPVLTGQR	2	HQKPVLTGQR2			5304.6
Q9WTT7	Q9WTT7	5MP1_RAT	Bzw2	eIF5-mimic protein 1	1	HQKPVLTGQR	HQKPVLTGQR	3	HQKPVLTGQR3			8738.61
Q499T5	Q499T5	Q499T5_RAT	Capn7	Calpain 7	1	HQLDLER	HQLDLER	2	HQLDLER2	22645.4		15582.4
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	HQLEETK	HQLEETK	2	HQLEETK2			27573.9
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	HQLEIFDALGSQACSNK	HQLEIFDALGSQAC(UniMod:4)SNK	2	HQLEIFDALGSQAC(UniMod:4)SNK2	4102.53	3652.31	4657
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	HQLEIFDALGSQACSNK	HQLEIFDALGSQAC(UniMod:4)SNK	3	HQLEIFDALGSQAC(UniMod:4)SNK3	26401.4	41441.2	26734.5
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	HQLLEADISAHEDR	HQLLEADISAHEDR	2	HQLLEADISAHEDR2	9265.2	4604.11	5357.21
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	HQLLEADISAHEDR	HQLLEADISAHEDR	3	HQLLEADISAHEDR3	251098	43233.5	231437
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	HQLLEADISAHEDR	HQLLEADISAHEDR	4	HQLLEADISAHEDR4	65243.8	82280.6	58422.8
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	HQLLEADISAHEDRLK	HQLLEADISAHEDRLK	3	HQLLEADISAHEDRLK3	5815.19	5175.14	5163.8
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	HQLLEADISAHEDRLK	HQLLEADISAHEDRLK	4	HQLLEADISAHEDRLK4	33378.8	50950.2	51046.8
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	HQLLEAEMLAR	HQLLEAEMLAR	3	HQLLEAEMLAR3	11094.9	13776.6	21000.7
Q91Z80	Q91Z80	LIPA4_RAT	Ppfia4	Liprin-alpha-4 (Fragment)	1	HQLLEDAR	HQLLEDAR	2	HQLLEDAR2		2042.21	4554.37
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	HQLLISGGR	HQLLISGGR	2	HQLLISGGR2	17049	14313.3	11864.9
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	HQLPAPK	HQLPAPK	2	HQLPAPK2	13604.2	19957.8	6841.67
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	HQLPEPSCPELATLTR	HQLPEPSC(UniMod:4)PELATLTR	3	HQLPEPSC(UniMod:4)PELATLTR3	5311.18		6664.23
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	HQLQQQTESALK	HQLQQQTESALK	2	HQLQQQTESALK2	8412.65	1369.6	648.11
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	HQLQQQTESALK	HQLQQQTESALK	3	HQLQQQTESALK3	16923.5	9962.94	17852.6
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	HQLQQQTESALKEQSELK	HQLQQQTESALKEQSELK	3	HQLQQQTESALKEQSELK3	759.821	1581.11	
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	HQLQQQTESALKEQSELKK	HQLQQQTESALKEQSELKK	4	HQLQQQTESALKEQSELKK4	8753.1	8204.55	8559.88
A0A8I5Y176	A0A8I5Y176	A0A8I5Y176_RAT	Ranbp9	RAN binding protein 9	1	HQLSSLNVPELNSINVSR	HQLSSLNVPELNSINVSR	3	HQLSSLNVPELNSINVSR3	2684.74		3735.76
F7EM85	F7EM85	F7EM85_RAT	Fbxo22	F-box protein 22	1	HQLTEVGLLDNPELR	HQLTEVGLLDNPELR	3	HQLTEVGLLDNPELR3	5622.25	241.319	
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	HQLWEGWPASATDDSMCLAESGLSYPCHR	HQLWEGWPASATDDSMC(UniMod:4)LAESGLSYPC(UniMod:4)HR	4	HQLWEGWPASATDDSMC(UniMod:4)LAESGLSYPC(UniMod:4)HR4	27883.4	41938.7	36062.8
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	HQNWVSGLSQHTGLAMATESILHFAGYNK	HQNWVSGLSQHTGLAMATESILHFAGYNK	4	HQNWVSGLSQHTGLAMATESILHFAGYNK4			4449.99
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	HQPADLLEFALQHFTR	HQPADLLEFALQHFTR	2	HQPADLLEFALQHFTR2	21821.5	31977.1	17873.9
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	HQPADLLEFALQHFTR	HQPADLLEFALQHFTR	3	HQPADLLEFALQHFTR3	1.05044e+06	1.07508e+06	1.00393e+06
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	HQPADLLEFALQHFTR	HQPADLLEFALQHFTR	4	HQPADLLEFALQHFTR4	79171.7	70104.3	82608.2
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	HQPAEALIWQIGSGEGVK	HQPAEALIWQIGSGEGVK	3	HQPAEALIWQIGSGEGVK3	48315.7	50344	41027.5
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	HQPAEALIWQIGSGEGVKR	HQPAEALIWQIGSGEGVKR	3	HQPAEALIWQIGSGEGVKR3	4022.62	4953.6	
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	HQPGQCVGHQEASVHASCCHAPGLECK	HQPGQC(UniMod:4)VGHQEASVHASC(UniMod:4)C(UniMod:4)HAPGLEC(UniMod:4)K	4	HQPGQC(UniMod:4)VGHQEASVHASC(UniMod:4)C(UniMod:4)HAPGLEC(UniMod:4)K4	41163.2	24177	34679
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	HQPLGVAPLVGNNKPDASK	HQPLGVAPLVGNNKPDASK	3	HQPLGVAPLVGNNKPDASK3	19919.2	14428.4	23916.9
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	HQPLGVAPLVGNNKPDASK	HQPLGVAPLVGNNKPDASK	4	HQPLGVAPLVGNNKPDASK4	26158.5	52562.9	37058.1
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	HQPTAIIAK	HQPTAIIAK	2	HQPTAIIAK2	217439	174222	176470
Q99P99	Q99P99	HDAC4_RAT	Hdac4	Histone deacetylase 4	1	HQQELLEHQR	HQQELLEHQR	3	HQQELLEHQR3	2969.66	7008.5	
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	HQQLLGEVLTQLSSR	HQQLLGEVLTQLSSR	2	HQQLLGEVLTQLSSR2	11544.7	15029.9	5634.51
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	HQQLLGEVLTQLSSR	HQQLLGEVLTQLSSR	3	HQQLLGEVLTQLSSR3	78501.1	77455.9	65532.6
D3ZQI6	D3ZQI6	D3ZQI6_RAT	Xpo4	Exportin 4	1	HQQQLLASPGSSTIDNK	HQQQLLASPGSSTIDNK	3	HQQQLLASPGSSTIDNK3	13853.4	14573.9	21328
A0A0G2K098	A0A0G2K098	A0A0G2K098_RAT	Mcc	MCC regulator of WNT signaling pathway	1	HQQSAEFVNDLKR	HQQSAEFVNDLKR	3	HQQSAEFVNDLKR3	2041.21	3778.05	4639.65
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	HQQVGWNLEGLR	HQQVGWNLEGLR	2	HQQVGWNLEGLR2	74045.3	84799.5	79272.9
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	HQQVGWNLEGLR	HQQVGWNLEGLR	3	HQQVGWNLEGLR3	448396	514930	488343
B1PLB1	B1PLB1	B1PLB1_RAT	Cd34	CD34 molecule	1	HQSDLRK	HQSDLRK	2	HQSDLRK2			13927.2
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	HQSIEEAK	HQSIEEAK	2	HQSIEEAK2			8605.33
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	HQSLGGQYGVQGFPTIK	HQSLGGQYGVQGFPTIK	2	HQSLGGQYGVQGFPTIK2	163892	165560	151250
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	HQSLGGQYGVQGFPTIK	HQSLGGQYGVQGFPTIK	3	HQSLGGQYGVQGFPTIK3	1.17046e+06	1.34319e+06	1.30744e+06
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	HQSNGAVIAR	HQSNGAVIAR	2	HQSNGAVIAR2	11344.8		5984.29
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	HQSTITVNEEGTQAAAVTTVGFMPLSTQVR	HQSTITVNEEGTQAAAVTTVGFMPLSTQVR	4	HQSTITVNEEGTQAAAVTTVGFMPLSTQVR4	453550	475600	444692
P31722	P31722	C1QC_RAT	C1qc	Complement C1q subcomponent subunit C	1	HQSVFTVTR	HQSVFTVTR	2	HQSVFTVTR2	35527.1	37208.6	26405.9
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	HQTHGSLLR	HQTHGSLLR	2	HQTHGSLLR2	33798.4	57416.6	20403.2
B0BMY7	B0BMY7	B0BMY7_RAT	Twf2	Twinfilin actin-binding protein 2	1	HQTLQGLAFPLQPEAQR	HQTLQGLAFPLQPEAQR	2	HQTLQGLAFPLQPEAQR2	4347.16		
B0BMY7	B0BMY7	B0BMY7_RAT	Twf2	Twinfilin actin-binding protein 2	1	HQTLQGLAFPLQPEAQR	HQTLQGLAFPLQPEAQR	3	HQTLQGLAFPLQPEAQR3	59563.5	41537.9	33655.6
Q5RJR2	Q5RJR2;A0A8I6GGS8	TWF1_RAT	Twf1	Twinfilin-1	0	HQTLQGVAFPISR	HQTLQGVAFPISR	2	HQTLQGVAFPISR2	19841.1	14112.7	16930.8
Q5RJR2	Q5RJR2;A0A8I6GGS8	TWF1_RAT	Twf1	Twinfilin-1	0	HQTLQGVAFPISR	HQTLQGVAFPISR	3	HQTLQGVAFPISR3	236305	243416	250390
Q9JMB3	Q9JMB3	Q9JMB3_RAT	Epb41l3	Erythrocyte membrane protein band 4.1-like 3	1	HQTNISELK	HQTNISELK	2	HQTNISELK2	14656.3	21957.4	11136.3
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	HQTVLENTNGK	HQTVLENTNGK	2	HQTVLENTNGK2	312705	318230	276026
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	HQTVLENTNGK	HQTVLENTNGK	3	HQTVLENTNGK3	242225	288837	353595
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	HQVEYLGLK	HQVEYLGLK	2	HQVEYLGLK2	19661.7	20928.7	12214
Q63357	Q63357;A0A0G2K6E3	MYO1D_RAT	Myo1d	Unconventional myosin-Id	0	HQVEYLGLLENVR	HQVEYLGLLENVR	2	HQVEYLGLLENVR2	11527.1	9586.01	10000.9
Q63357	Q63357;A0A0G2K6E3	MYO1D_RAT	Myo1d	Unconventional myosin-Id	0	HQVEYLGLLENVR	HQVEYLGLLENVR	3	HQVEYLGLLENVR3	70766	65240.9	73045
D4A7X9	D4A7X9	D4A7X9_RAT	Myo1f	Myosin IF	1	HQVEYLGLR	HQVEYLGLR	2	HQVEYLGLR2	6883.31	4749.62	
Q5PPI8	Q5PPI8	Q5PPI8_RAT	Rmc1	Regulator of MON1-CCZ1	1	HQVLAALR	HQVLAALR	2	HQVLAALR2	11639.7	9092.18	7737.75
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	HQVQIDHYLGLANK	HQVQIDHYLGLANK	2	HQVQIDHYLGLANK2	16992.4	12218.3	14768.9
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	HQVQIDHYLGLANK	HQVQIDHYLGLANK	3	HQVQIDHYLGLANK3	396660	364920	370130
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	HQVQIDHYLGLANK	HQVQIDHYLGLANK	4	HQVQIDHYLGLANK4	289974	288324	278231
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	HQYCALK	HQYC(UniMod:4)ALK	2	HQYC(UniMod:4)ALK2	20508.9	24812.2	17686.4
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	HQYINEDEYEVNLK	HQYINEDEYEVNLK	3	HQYINEDEYEVNLK3	8407.05	10856.4	9386.74
Q4KLH3	Q4KLH3	OGRL1_RAT	Ogfrl1	Opioid growth factor receptor-like protein 1	1	HQYPNFK	HQYPNFK	2	HQYPNFK2	13280.1	10377.7	8324.65
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	HQYQEEMIQR	HQYQEEMIQR	2	HQYQEEMIQR2	5664.82	7195.58	11616.8
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	HQYQEEMIQR	HQYQEEMIQR	3	HQYQEEMIQR3	24437.1	23455	24768.1
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	HQYYNQEWTLWDR	HQYYNQEWTLWDR	3	HQYYNQEWTLWDR3	4230.8	4078.32	6633.72
Q4V8C7	Q4V8C7	PRKRA_RAT	Prkra	Interferon-inducible double-stranded RNA-dependent protein kinase activator A	1	HRAEAPPLQR	HRAEAPPLQR	3	HRAEAPPLQR3	6454.19	12516.8	
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	HRAEDWCEELECR	HRAEDWC(UniMod:4)EELEC(UniMod:4)R	3	HRAEDWC(UniMod:4)EELEC(UniMod:4)R3	4111.98	4190.13	4041.21
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	HRAFEDEMSGR	HRAFEDEMSGR	3	HRAFEDEMSGR3	10066.7	19008.5	23740.2
Q9R1T1	Q9R1T1	BAF_RAT	Banf1	Barrier-to-autointegration factor	1	HRDFVAEPMGEK	HRDFVAEPMGEK	3	HRDFVAEPMGEK3	18815.2		
Q9R1T1	Q9R1T1	BAF_RAT	Banf1	Barrier-to-autointegration factor	1	HRDFVAEPMGEKPVGSLAGIGDALGK	HRDFVAEPMGEKPVGSLAGIGDALGK	4	HRDFVAEPMGEKPVGSLAGIGDALGK4	24482.1	26797.4	27006
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	HRDPQLFYK	HRDPQLFYK	3	HRDPQLFYK3	20428.2	15844.7	10664.3
P02688	P02688	MBP_RAT	Mbp	Myelin basic protein	1	HRDTGILDSIGR	HRDTGILDSIGR	3	HRDTGILDSIGR3	18054.1	12723.8	15790.6
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	HRDYETATLSDIK	HRDYETATLSDIK	2	HRDYETATLSDIK2	14641.5	19547.2	12944.7
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	HRDYETATLSDIK	HRDYETATLSDIK	3	HRDYETATLSDIK3	60829.8	217652	323250
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	HREAMFALPAEK	HREAMFALPAEK	3	HREAMFALPAEK3	6035.97	9657.01	6841.28
B1WBW2	B1WBW2	B1WBW2_RAT	Rwdd2b	RWD domain containing 2B	1	HREDIPFDSTTEK	HREDIPFDSTTEK	3	HREDIPFDSTTEK3	6448.59	2628.27	8741.6
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	HREEGVPGDPGAGLEDNLAR	HREEGVPGDPGAGLEDNLAR	3	HREEGVPGDPGAGLEDNLAR3	6117.16		
A0A1W2Q6I2	A0A1W2Q6I2	A0A1W2Q6I2_RAT	Otud6b	ubiquitinyl hydrolase 1	1	HREELEQLK	HREELEQLK	3	HREELEQLK3	6206.17		6012.15
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	HREQLLIEVGQK	HREQLLIEVGQK	3	HREQLLIEVGQK3	10596	8028.56	18496.2
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	HRFEVNPVLK	HRFEVNPVLK	2	HRFEVNPVLK2	4176.74	8025.67	4939.81
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	HRFEVNPVLK	HRFEVNPVLK	3	HRFEVNPVLK3	262590	298957	279092
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	HRFEVNPVLKK	HRFEVNPVLKK	3	HRFEVNPVLKK3	20220	10794.5	22946.4
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	HRFNVLCDVSGK	HRFNVLC(UniMod:4)DVSGK	3	HRFNVLC(UniMod:4)DVSGK3			4897.22
Q9JK72	Q9JK72	CCS_RAT	Ccs	Copper chaperone for superoxide dismutase	1	HRGDLGNVHAEASGR	HRGDLGNVHAEASGR	4	HRGDLGNVHAEASGR4	13814		
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	HRIDDEIR	HRIDDEIR	2	HRIDDEIR2	8069.07	5291.02	
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	HRIDDEIRYECK	HRIDDEIRYEC(UniMod:4)K	3	HRIDDEIRYEC(UniMod:4)K3	6122.31	10897.3	
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	HRIDDEIRYECK	HRIDDEIRYEC(UniMod:4)K	4	HRIDDEIRYEC(UniMod:4)K4	15740.8	17622.2	9206.6
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	HRIPVPILPGLPMNNHGNYIVR	HRIPVPILPGLPMNNHGNYIVR	4	HRIPVPILPGLPMNNHGNYIVR4	77070.4	76901.8	69448.7
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	HRLEAISIMDSK	HRLEAISIMDSK	3	HRLEAISIMDSK3	115612	112721	121128
F1M2D4	F1M2D4	F1M2D4_RAT	Arhgap23	Rho GTPase activating protein 23	1	HRLEPMDTIFVK	HRLEPMDTIFVK	3	HRLEPMDTIFVK3	6118.2	3670.12	
G3V8S6	G3V8S6	G3V8S6_RAT	Hrc	Histidine rich calcium binding protein	1	HRLQDQDEWTR	HRLQDQDEWTR	3	HRLQDQDEWTR3	4946.92	3434.43	13784.9
A0A8I5ZWC6	A0A8I5ZWC6	A0A8I5ZWC6_RAT	Kpna3	Importin subunit alpha	1	HRNEVTVELR	HRNEVTVELR	3	HRNEVTVELR3	34670.2	42861.5	38991
P84079	A0A8I5ZU96;P84079	ARF1_RAT	Arf1	ADP-ribosylation factor 1	0	HRNWYIQATCATSGDGLYEGLDWLSNQLR	HRNWYIQATC(UniMod:4)ATSGDGLYEGLDWLSNQLR	4	HRNWYIQATC(UniMod:4)ATSGDGLYEGLDWLSNQLR4	4322.08	3980.18	4183.91
G3V6S0	G3V6S0;A0A8I6AWM3	G3V6S0_RAT	Sptbn1	Spectrin beta chain	0	HRPDLIDFDK	HRPDLIDFDK	2	HRPDLIDFDK2	3792.21	13238.2	6884.17
G3V6S0	G3V6S0;A0A8I6AWM3	G3V6S0_RAT	Sptbn1	Spectrin beta chain	0	HRPDLIDFDK	HRPDLIDFDK	3	HRPDLIDFDK3	685604	621364	699279
G3V6S0	G3V6S0;A0A8I6AWM3	G3V6S0_RAT	Sptbn1	Spectrin beta chain	0	HRPDLIDFDKLK	HRPDLIDFDKLK	3	HRPDLIDFDKLK3	62239.1	47320.3	46765.2
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	HRPDLINFNALR	HRPDLINFNALR	3	HRPDLINFNALR3	17819.5	26482.4	26927.5
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	HRPDLLDFQSLSK	HRPDLLDFQSLSK	3	HRPDLLDFQSLSK3	60937.8	47890.7	48693.3
D4A6D9	D4A6D9	D4A6D9_RAT	Hs1bp3	HCLS1 binding protein 3	1	HRPEDVVQFLVSK	HRPEDVVQFLVSK	3	HRPEDVVQFLVSK3	14414.1	18478.8	8011.2
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	HRPELIDYGK	HRPELIDYGK	2	HRPELIDYGK2	72694.3	80599.2	69866
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	HRPELIDYGK	HRPELIDYGK	3	HRPELIDYGK3	5.53209e+06	6.92009e+06	6.36175e+06
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	HRPELIEYDK	HRPELIEYDK	2	HRPELIEYDK2	20147.4	18017.7	17645
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	HRPELIEYDK	HRPELIEYDK	3	HRPELIEYDK3	105338	134687	119919
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	HRPELIEYDKLR	HRPELIEYDKLR	3	HRPELIEYDKLR3	14503.1	16377.7	9193.83
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	HRPELIEYDKLR	HRPELIEYDKLR	4	HRPELIEYDKLR4	86988	50929.5	61348.9
A0A0G2JUV4	A0A0G2JUV4	A0A0G2JUV4_RAT	Mrpl1	Mitochondrial ribosomal protein L1	1	HRPLNLGPFVVR	HRPLNLGPFVVR	3	HRPLNLGPFVVR3	20498.1		17096.7
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	HRPQLLVER	HRPQLLVER	3	HRPQLLVER3	45480.3	46622.3	31722.6
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	HRPQVAVICGSGLGGLTAK	HRPQVAVIC(UniMod:4)GSGLGGLTAK	3	HRPQVAVIC(UniMod:4)GSGLGGLTAK3	111761	74459.8	63576
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	HRPQVAVICGSGLGGLTAK	HRPQVAVIC(UniMod:4)GSGLGGLTAK	4	HRPQVAVIC(UniMod:4)GSGLGGLTAK4	76632.8	86920.2	76487.4
A0A8I6ANR6	A0A8I6ANR6	A0A8I6ANR6_RAT	Chuk	IkappaB kinase	1	HRPTDHSYSDSTEMVK	HRPTDHSYSDSTEMVK	4	HRPTDHSYSDSTEMVK4	5991.49	8882.94	12153.2
F7EUH5	F7EUH5	F7EUH5_RAT	Plxdc2	Plexin domain containing 2	1	HRQDWVDSGCPEEVQSK	HRQDWVDSGC(UniMod:4)PEEVQSK	3	HRQDWVDSGC(UniMod:4)PEEVQSK3	337066	329799	300913
F7EUH5	F7EUH5	F7EUH5_RAT	Plxdc2	Plexin domain containing 2	1	HRQDWVDSGCPEEVQSK	HRQDWVDSGC(UniMod:4)PEEVQSK	4	HRQDWVDSGC(UniMod:4)PEEVQSK4	360108	344595	308004
F7EUH5	F7EUH5	F7EUH5_RAT	Plxdc2	Plexin domain containing 2	1	HRQDWVDSGCPEEVQSKEK	HRQDWVDSGC(UniMod:4)PEEVQSKEK	4	HRQDWVDSGC(UniMod:4)PEEVQSKEK4	3586.16	3042.08	7591.73
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	HRQEESLLGR	HRQEESLLGR	3	HRQEESLLGR3	36019.7	39591.7	35384.9
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	HRTPMVSVPK	HRTPMVSVPK	3	HRTPMVSVPK3			5941.84
M0R402	M0R402	M0R402_RAT	Tmx3	Thioredoxin-related transmembrane protein 3	1	HRVFFVYIGGESPLK	HRVFFVYIGGESPLK	3	HRVFFVYIGGESPLK3	4666.95	626.386	5913.67
P86182	P86182	CCD22_RAT	Ccdc22	Coiled-coil domain-containing protein 22	1	HRVPLLAEYR	HRVPLLAEYR	3	HRVPLLAEYR3	15510.6	19836.7	18788.6
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	HRVQELGHGCSALVTK	HRVQELGHGC(UniMod:4)SALVTK	3	HRVQELGHGC(UniMod:4)SALVTK3	19861.3	17130.6	12669.7
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	HRVQELGHGCSALVTK	HRVQELGHGC(UniMod:4)SALVTK	4	HRVQELGHGC(UniMod:4)SALVTK4	214227	239908	274982
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	HSAAFQLCGK	HSAAFQLC(UniMod:4)GK	2	HSAAFQLC(UniMod:4)GK2	8612.37	21125.5	9893.1
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	HSAASGDAFDIQR	HSAASGDAFDIQR	2	HSAASGDAFDIQR2	13292	12660.8	17376
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	HSAASGDAFDIQR	HSAASGDAFDIQR	3	HSAASGDAFDIQR3	222304	220790	275209
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	HSAKPVLPTSGWK	HSAKPVLPTSGWK	3	HSAKPVLPTSGWK3	25072.1	17886	22923
Q8K4C0	Q8K4C0	FMO5_RAT	Fmo5	Flavin-containing monooxygenase 5	1	HSALGQHPTINDDLPNR	HSALGQHPTINDDLPNR	3	HSALGQHPTINDDLPNR3	3022.67	9484.93	3219.76
Q8K4C0	Q8K4C0	FMO5_RAT	Fmo5	Flavin-containing monooxygenase 5	1	HSALGQHPTINDDLPNR	HSALGQHPTINDDLPNR	4	HSALGQHPTINDDLPNR4	10463.8	12910.7	18177.8
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	HSANTPR	HSANTPR	2	HSANTPR2		23140.9	65636.2
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	HSAPEQLLASHLQQMHLDSR	HSAPEQLLASHLQQMHLDSR	4	HSAPEQLLASHLQQMHLDSR4	10961.4	14891.8	10347.1
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	HSASDPGPPPVVNSSSR	HSASDPGPPPVVNSSSR	3	HSASDPGPPPVVNSSSR3	11737	8658.13	5696.82
D3ZFS7	D3ZFS7	D3ZFS7_RAT	Lyplal1	palmitoyl-protein hydrolase	1	HSASLIFLHGSGDSGQGLR	HSASLIFLHGSGDSGQGLR	3	HSASLIFLHGSGDSGQGLR3	1758.5	2189.32	
D3ZFS7	D3ZFS7	D3ZFS7_RAT	Lyplal1	palmitoyl-protein hydrolase	1	HSASLIFLHGSGDSGQGLR	HSASLIFLHGSGDSGQGLR	4	HSASLIFLHGSGDSGQGLR4	9154.13	12417	8728.08
P0C5W1	P0C5W1	MAP1S_RAT	Map1s	Microtubule-associated protein 1S	1	HSATFSSIVK	HSATFSSIVK	2	HSATFSSIVK2	15254.3	10001.5	15134.4
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	HSCDALNR	HSC(UniMod:4)DALNR	2	HSC(UniMod:4)DALNR2	6139.1		2023.48
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	HSCGDGFCSR	HSC(UniMod:4)GDGFC(UniMod:4)SR	2	HSC(UniMod:4)GDGFC(UniMod:4)SR2	5191.71	5630.21	3132.92
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	HSCGDGFCSRPNMCTCPSGQISPSCGSR	HSC(UniMod:4)GDGFC(UniMod:4)SRPNMC(UniMod:4)TC(UniMod:4)PSGQISPSC(UniMod:4)GSR	4	HSC(UniMod:4)GDGFC(UniMod:4)SRPNMC(UniMod:4)TC(UniMod:4)PSGQISPSC(UniMod:4)GSR4	12408.7	17864	3346.59
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	HSCIDINECR	HSC(UniMod:4)IDINEC(UniMod:4)R	2	HSC(UniMod:4)IDINEC(UniMod:4)R2	15757.9	18191.4	7493.13
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	HSCIDINECR	HSC(UniMod:4)IDINEC(UniMod:4)R	3	HSC(UniMod:4)IDINEC(UniMod:4)R3	132034	161260	141378
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	HSCIFPGQYNPSFISDESR	HSC(UniMod:4)IFPGQYNPSFISDESR	3	HSC(UniMod:4)IFPGQYNPSFISDESR3	10750.3	7554.27	11829.3
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	HSCQDTDECLGTPCQQR	HSC(UniMod:4)QDTDEC(UniMod:4)LGTPC(UniMod:4)QQR	3	HSC(UniMod:4)QDTDEC(UniMod:4)LGTPC(UniMod:4)QQR3	95118.9	114277	122867
P58751	P58751	RELN_RAT	Reln	Reelin	1	HSCQSDGNAIYFHGNEGSQLNFATTR	HSC(UniMod:4)QSDGNAIYFHGNEGSQLNFATTR	3	HSC(UniMod:4)QSDGNAIYFHGNEGSQLNFATTR3	2252.32	1233.78	2422.84
P58751	P58751	RELN_RAT	Reln	Reelin	1	HSCQSDGNAIYFHGNEGSQLNFATTR	HSC(UniMod:4)QSDGNAIYFHGNEGSQLNFATTR	4	HSC(UniMod:4)QSDGNAIYFHGNEGSQLNFATTR4	13560.2	13051.4	15655.5
P08721	P08721	OSTP_RAT	Spp1	Osteopontin	1	HSDAVATWLKPDPSQK	HSDAVATWLKPDPSQK	2	HSDAVATWLKPDPSQK2	17818.9	18314.6	13618.2
P08721	P08721	OSTP_RAT	Spp1	Osteopontin	1	HSDAVATWLKPDPSQK	HSDAVATWLKPDPSQK	3	HSDAVATWLKPDPSQK3	897754	985283	1.01645e+06
P08721	P08721	OSTP_RAT	Spp1	Osteopontin	1	HSDAVATWLKPDPSQK	HSDAVATWLKPDPSQK	4	HSDAVATWLKPDPSQK4	318127	383731	383040
F1M332	F1M332	F1M332_RAT	Arhgap28	Rho GTPase activating protein 28	1	HSDCEELLVANTAAHIIR	HSDC(UniMod:4)EELLVANTAAHIIR	3	HSDC(UniMod:4)EELLVANTAAHIIR3	3504.36	3033.73	4637.8
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	HSDFASK	HSDFASK	2	HSDFASK2			355788
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	HSDITSHSCPPVEHVTA	HSDITSHSC(UniMod:4)PPVEHVTA	2	HSDITSHSC(UniMod:4)PPVEHVTA2	4380.58	3292.3	4079.85
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	HSDITSHSCPPVEHVTA	HSDITSHSC(UniMod:4)PPVEHVTA	3	HSDITSHSC(UniMod:4)PPVEHVTA3	66339.1	82438.9	83195.4
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	HSDLEALFQDFK	HSDLEALFQDFK	3	HSDLEALFQDFK3	6633.4	6084.03	7876.78
A0A8I6A0D0	A0A8I6A0D0	A0A8I6A0D0_RAT	Abcg3	ATP-binding cassette, subfamily G (WHITE), member 3	1	HSDLPETNTSDPETLTK	HSDLPETNTSDPETLTK	3	HSDLPETNTSDPETLTK3	2669.17	4512.84	8516.02
A0A8I5ZQ72	A0A8I5ZQ72	A0A8I5ZQ72_RAT	Zc3h12c	Zinc finger CCCH type containing 12C	1	HSDVLQDFKPEESQTPSK	HSDVLQDFKPEESQTPSK	3	HSDVLQDFKPEESQTPSK3		3922.11	4199.56
A0A8I5ZQ72	A0A8I5ZQ72	A0A8I5ZQ72_RAT	Zc3h12c	Zinc finger CCCH type containing 12C	1	HSDVLQDFKPEESQTPSK	HSDVLQDFKPEESQTPSK	4	HSDVLQDFKPEESQTPSK4	7100.18	7162.66	9385.09
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	HSEDCTSYEAPSR	HSEDC(UniMod:4)TSYEAPSR	2	HSEDC(UniMod:4)TSYEAPSR2	1187.7		
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	HSEDCTSYEAPSR	HSEDC(UniMod:4)TSYEAPSR	3	HSEDC(UniMod:4)TSYEAPSR3	16585.4	11539.9	11301.7
Q08850	Q08850	STX4_RAT	Stx4	Syntaxin-4	1	HSEIQQLER	HSEIQQLER	2	HSEIQQLER2	27756.3	25674.9	23569.9
Q5XHY7	B5DF55;Q5XHY7	STAM2_RAT	Stam2	Signal transducing adapter molecule 2	0	HSELSELNVK	HSELSELNVK	2	HSELSELNVK2	15354.3	5648.53	6464.66
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	HSEMEEAIGAMK	HSEMEEAIGAMK	2	HSEMEEAIGAMK2	6677.56	8314.85	11724.7
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	HSEMEEAIGAMK	HSEMEEAIGAMK	3	HSEMEEAIGAMK3	52293.3	48130.9	45371.4
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	HSEMEEAIGAMKDK	HSEMEEAIGAMKDK	3	HSEMEEAIGAMKDK3	24373.7	30367.3	46353.6
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	HSEQDELMADISK	HSEQDELMADISK	3	HSEQDELMADISK3	7634.28	4750.88	
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	HSEQSEPDMITIFIGTWNMGNAPPPKK	HSEQSEPDMITIFIGTWNMGNAPPPKK	4	HSEQSEPDMITIFIGTWNMGNAPPPKK4	2770.68	3663.34	4332.64
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	HSESEQNWEAVDGSQAESEK	HSESEQNWEAVDGSQAESEK	3	HSESEQNWEAVDGSQAESEK3	24140.1	10113.9	16582.3
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	HSESEQNWEAVDGSQAESEKR	HSESEQNWEAVDGSQAESEKR	4	HSESEQNWEAVDGSQAESEKR4	1787.45	3492.11	
Q68FW9	Q68FW9	CSN3_RAT	Cops3	COP9 signalosome complex subunit 3	1	HSETFTR	HSETFTR	2	HSETFTR2	48693.8		58495.1
Q76LD0	Q76LD0	CRDL1_RAT	Chrdl1	Chordin-like protein 1	1	HSETYCMFQDK	HSETYC(UniMod:4)MFQDK	2	HSETYC(UniMod:4)MFQDK2	9612.5	7771.15	9812.59
Q76LD0	Q76LD0	CRDL1_RAT	Chrdl1	Chordin-like protein 1	1	HSETYCMFQDK	HSETYC(UniMod:4)MFQDK	3	HSETYC(UniMod:4)MFQDK3	29458.4	37117.3	39685.5
Q76LD0	Q76LD0	CRDL1_RAT	Chrdl1	Chordin-like protein 1	1	HSETYCMFQDKK	HSETYC(UniMod:4)MFQDKK	3	HSETYC(UniMod:4)MFQDKK3	3805.74	2903.46	6405.29
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	HSEVQQANLK	HSEVQQANLK	2	HSEVQQANLK2	92985.4	105535	102076
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	HSEVQQANLK	HSEVQQANLK	3	HSEVQQANLK3	33330.8	43751.5	44416.8
Q63484	Q63484	AKT3_RAT	Akt3	RAC-gamma serine/threonine-protein kinase	1	HSFFSGVNWQDVYDKK	HSFFSGVNWQDVYDKK	3	HSFFSGVNWQDVYDKK3		4518.92	6292.75
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	HSFIVTASDR	HSFIVTASDR	2	HSFIVTASDR2	5559.71	5507.38	6244.2
D3ZXY2	D3ZXY2	D3ZXY2_RAT	Pdzd8	PDZ domain containing 8	1	HSFQDTQFQNPTWCDYCK	HSFQDTQFQNPTWC(UniMod:4)DYC(UniMod:4)K	3	HSFQDTQFQNPTWC(UniMod:4)DYC(UniMod:4)K3	2504.05		2517.18
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	HSFTAETSLGSEFVTGWTGK	HSFTAETSLGSEFVTGWTGK	3	HSFTAETSLGSEFVTGWTGK3	2937.93	5318.6	5046.52
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	HSGDYFTLLR	HSGDYFTLLR	2	HSGDYFTLLR2	53528.4	71238.6	62761.5
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	HSGDYFTLLR	HSGDYFTLLR	3	HSGDYFTLLR3	20119	29117.3	13548
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	HSGFSTSDNSTANTPQDYSGNMK	HSGFSTSDNSTANTPQDYSGNMK	3	HSGFSTSDNSTANTPQDYSGNMK3	44205.5	42060.8	40051.2
A0A0G2K652	A0A0G2K652	A0A0G2K652_RAT	Cul9	Cullin 9	1	HSGIAPGTEPMPTTR	HSGIAPGTEPMPTTR	3	HSGIAPGTEPMPTTR3	4166.96	4892.66	
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	HSGIDFK	HSGIDFK	1	HSGIDFK1	9681.61	9835.93	11689.6
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	HSGIDFK	HSGIDFK	2	HSGIDFK2	825277	834099	929618
Q2M2S1	Q2M2S1	Q2M2S1_RAT	Tor1b	Torsin	1	HSGLWHSGLIDK	HSGLWHSGLIDK	3	HSGLWHSGLIDK3	5880.38	6938.81	4912.21
D4A352	D4A352	D4A352_RAT	Myrf	Myelin regulatory factor	1	HSGPGQMAPLPVTNIR	HSGPGQMAPLPVTNIR	3	HSGPGQMAPLPVTNIR3	10444.6	9527.71	5683.71
Q794E4	Q794E4;A0A8I5ZW75	HNRPF_RAT	Hnrnpf	Heterogeneous nuclear ribonucleoprotein F	0	HSGPNSADSANDGFVR	HSGPNSADSANDGFVR	2	HSGPNSADSANDGFVR2	2815.24	1270.67	3617.33
Q794E4	Q794E4;A0A8I5ZW75	HNRPF_RAT	Hnrnpf	Heterogeneous nuclear ribonucleoprotein F	0	HSGPNSADSANDGFVR	HSGPNSADSANDGFVR	3	HSGPNSADSANDGFVR3	16949.8	19682.9	9683.61
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	HSGQDVHVVLK	HSGQDVHVVLK	2	HSGQDVHVVLK2		3039.46	
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	HSGQDVHVVLK	HSGQDVHVVLK	3	HSGQDVHVVLK3	103468	103623	120314
O88277	O88277	FAT2_RAT	Fat2	Protocadherin Fat 2	1	HSGTSYDLQELASAIAHSVR	HSGTSYDLQELASAIAHSVR	3	HSGTSYDLQELASAIAHSVR3		5579.36	3082.85
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	HSGVDDMVLLSK	HSGVDDMVLLSK	2	HSGVDDMVLLSK2	7856.77	8606.83	6267.09
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	HSGVDDMVLLSK	HSGVDDMVLLSK	3	HSGVDDMVLLSK3	27655.2	25458.5	28134.4
A0A8I6ASC6	A0A8I6ASC6	A0A8I6ASC6_RAT	Igdcc4	Immunoglobulin superfamily, DCC subclass, member 4	1	HSGVYVCR	HSGVYVC(UniMod:4)R	2	HSGVYVC(UniMod:4)R2	15040.4	8586.51	11864
P24062	P24062	IGF1R_RAT	Igf1r	Insulin-like growth factor 1 receptor	1	HSHALVSLSFLK	HSHALVSLSFLK	3	HSHALVSLSFLK3	5815.42	7803.35	1127.22
Q5RJR2	Q5RJR2	TWF1_RAT	Twf1	Twinfilin-1	1	HSHEGDYLESIVFIYSMPGYTCSIR	HSHEGDYLESIVFIYSMPGYTC(UniMod:4)SIR	4	HSHEGDYLESIVFIYSMPGYTC(UniMod:4)SIR4	39994.8	23193.8	21157
D4AE56	D4AE56	D4AE56_RAT	Ptges2	Prostaglandin E synthase 2	1	HSHIQPWYLR	HSHIQPWYLR	3	HSHIQPWYLR3	3555.54	8166.9	3993.85
P09760	P09760	FER_RAT	Fer	Tyrosine-protein kinase Fer	1	HSIAGIIK	HSIAGIIK	2	HSIAGIIK2	12527.6	11410.1	13848.5
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	HSIEDIHAFAIR	HSIEDIHAFAIR	3	HSIEDIHAFAIR3	59352.8	56047.5	49641.3
D4A1B2	D4A1B2	D4A1B2_RAT	Arpin	Arpin	1	HSILDAHGR	HSILDAHGR	2	HSILDAHGR2	3738.93	7069.64	7279.27
Q07977	Q07977	SIA8B_RAT	St8sia2	Alpha-2,8-sialyltransferase 8B	1	HSIQPASSK	HSIQPASSK	2	HSIQPASSK2			7152.6
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	HSISEWR	HSISEWR	2	HSISEWR2	25311.6	23396.2	26365.7
F7FE56	F7FE56	F7FE56_RAT	Tpd52l1	TPD52 like 1	1	HSISMPAMR	HSISMPAMR	2	HSISMPAMR2	14142.8	14529.3	16631.9
O08774	O08774	RGS12_RAT	Rgs12	Regulator of G-protein signaling 12	1	HSISSDHSNVSTPK	HSISSDHSNVSTPK	3	HSISSDHSNVSTPK3	4500.77		10213.4
A0A0G2JVT8	A0A8I6ARY9;A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	0	HSISTLNIELVNSTILK	HSISTLNIELVNSTILK	3	HSISTLNIELVNSTILK3	4252.61	4137.03	
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	HSLALYPLITCLLCVSQK	HSLALYPLITC(UniMod:4)LLC(UniMod:4)VSQK	3	HSLALYPLITC(UniMod:4)LLC(UniMod:4)VSQK3	8098.92	6648.33	5217.13
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	HSLALYPLVTCLLCVSQK	HSLALYPLVTC(UniMod:4)LLC(UniMod:4)VSQK	3	HSLALYPLVTC(UniMod:4)LLC(UniMod:4)VSQK3	20314.3	27461.9	16094.9
A0A8I6ARU6	A0A8I6ARU6	A0A8I6ARU6_RAT	Galk1	Galactokinase 1	1	HSLASSEYPIR	HSLASSEYPIR	3	HSLASSEYPIR3	19923.9	15077.2	14977.3
A0A0G2JZH8	A0A0G2JZH8	A0A0G2JZH8_RAT	Pdhx	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	HSLDASQGTATGPR	HSLDASQGTATGPR	2	HSLDASQGTATGPR2	2747.76	3550.09	1652.16
A0A0G2JZH8	A0A0G2JZH8	A0A0G2JZH8_RAT	Pdhx	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	HSLDASQGTATGPR	HSLDASQGTATGPR	3	HSLDASQGTATGPR3	10276.9	13561.7	19773.9
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	HSLECIQANQIFPR	HSLEC(UniMod:4)IQANQIFPR	3	HSLEC(UniMod:4)IQANQIFPR3	15969.7	13979.5	20155.6
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	HSLEISSALNMFNISPHGPDISK	HSLEISSALNMFNISPHGPDISK	4	HSLEISSALNMFNISPHGPDISK4	1048.61	2634.95	13047.3
O09014	O09014	S15A4_RAT	Slc15a4	Solute carrier family 15 member 4	1	HSLFDSCK	HSLFDSC(UniMod:4)K	2	HSLFDSC(UniMod:4)K2	7967.89	8482.82	3821.57
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	HSLGMSVR	HSLGMSVR	2	HSLGMSVR2	42738.3	58235.3	42119.1
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	HSLHLMCDSTPDR	HSLHLMC(UniMod:4)DSTPDR	2	HSLHLMC(UniMod:4)DSTPDR2	2351.34	3406.39	
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	HSLHLMCDSTPDR	HSLHLMC(UniMod:4)DSTPDR	3	HSLHLMC(UniMod:4)DSTPDR3	117989	98022.6	116365
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	HSLHLMCDSTPDR	HSLHLMC(UniMod:4)DSTPDR	4	HSLHLMC(UniMod:4)DSTPDR4	20509.9	31417.1	40102.7
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	HSLIGPDIK	HSLIGPDIK	2	HSLIGPDIK2	5167.12	4153.09	7729.18
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	HSLLHFLEDEK	HSLLHFLEDEK	3	HSLLHFLEDEK3	10761.1	10821	5876.72
A0A8I6AMS6	A0A8I6AMS6	A0A8I6AMS6_RAT	Rangap1	RAN GTPase activating protein 1	1	HSLLQTLYSI	HSLLQTLYSI	2	HSLLQTLYSI2	3923.74	3884.79	5450.17
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	HSLMDGLGAK	HSLMDGLGAK	2	HSLMDGLGAK2	34802.6	45508.9	25689.7
P07895	P07895	SODM_RAT	Sod2	Superoxide dismutase [Mn], mitochondrial	1	HSLPDLPYDYGALEPHINAQIMQLHHSK	HSLPDLPYDYGALEPHINAQIMQLHHSK	4	HSLPDLPYDYGALEPHINAQIMQLHHSK4	240712	243721	246429
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	HSLPFSLPSQMEPR	HSLPFSLPSQMEPR	2	HSLPFSLPSQMEPR2	14684.7	16646.3	10862.7
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	HSLPFSLPSQMEPR	HSLPFSLPSQMEPR	3	HSLPFSLPSQMEPR3	54801	46629.7	50777
Q9JHU5	Q9JHU5	ARFP1_RAT	Arfip1	Arfaptin-1	1	HSLPSGLGLSETQITSHGFDSTK	HSLPSGLGLSETQITSHGFDSTK	3	HSLPSGLGLSETQITSHGFDSTK3	7837.32	15748.4	8345.2
Q9JHU5	Q9JHU5	ARFP1_RAT	Arfip1	Arfaptin-1	1	HSLPSGLGLSETQITSHGFDSTK	HSLPSGLGLSETQITSHGFDSTK	4	HSLPSGLGLSETQITSHGFDSTK4	13680.3	15731	10514
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	HSLQEVTSMTFK	HSLQEVTSMTFK	3	HSLQEVTSMTFK3	22721.7	15044.7	13861.3
Q9JJK4	Q9JJK4	PEX3_RAT	Pex3	Peroxisomal biogenesis factor 3	1	HSLSLLDLEQK	HSLSLLDLEQK	3	HSLSLLDLEQK3	1893.18		1078.71
A1L1J7	A1L1J7	A1L1J7_RAT	Pbk	PDZ binding kinase	1	HSLYGNC	HSLYGNC(UniMod:4)	2	HSLYGNC(UniMod:4)2		3696.36	
Q9JLD2	Q9JLD2	NEUS_RAT	Serpini1	Neuroserpin	1	HSMGYESLK	HSMGYESLK	2	HSMGYESLK2	7142.15		
Q5EB77	A0A8I5ZQR4;Q5EB77	RAB18_RAT	Rab18	Ras-related protein Rab-18	0	HSMLFIEASAK	HSMLFIEASAK	2	HSMLFIEASAK2	17458.9	13020.1	13068.6
Q5EB77	A0A8I5ZQR4;Q5EB77	RAB18_RAT	Rab18	Ras-related protein Rab-18	0	HSMLFIEASAK	HSMLFIEASAK	3	HSMLFIEASAK3	17281.7	12377.6	14739.6
F7EQT9	F7EQT9	F7EQT9_RAT	Agpat1	1-acyl-sn-glycerol-3-phosphate acyltransferase	1	HSMLTIFR	HSMLTIFR	2	HSMLTIFR2	26075.8	19886.3	27349.9
Q68FU3	Q68FU3	ETFB_RAT	Etfb	Electron transfer flavoprotein subunit beta	1	HSMNPFCEIAVEEAVR	HSMNPFC(UniMod:4)EIAVEEAVR	2	HSMNPFC(UniMod:4)EIAVEEAVR2	4140.07	2213.45	6265.29
Q68FU3	Q68FU3	ETFB_RAT	Etfb	Electron transfer flavoprotein subunit beta	1	HSMNPFCEIAVEEAVR	HSMNPFC(UniMod:4)EIAVEEAVR	3	HSMNPFC(UniMod:4)EIAVEEAVR3	26029.2	34512.8	24627.6
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	HSNALVDVLPPEADSSIMMLTSDQK	HSNALVDVLPPEADSSIMMLTSDQK	3	HSNALVDVLPPEADSSIMMLTSDQK3		41201.7	30283.7
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	HSNASQSLCEIVR	HSNASQSLC(UniMod:4)EIVR	2	HSNASQSLC(UniMod:4)EIVR2	2299.75	2280.51	
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	HSNASQSLCEIVR	HSNASQSLC(UniMod:4)EIVR	3	HSNASQSLC(UniMod:4)EIVR3	46186.1	56414.1	45063.3
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	HSNFLGAYDSIR	HSNFLGAYDSIR	3	HSNFLGAYDSIR3	9097.71	9054.63	4947.79
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	HSNFQEK	HSNFQEK	2	HSNFQEK2			11766.9
A0A0G2KAU4	A0A0G2KAU4	A0A0G2KAU4_RAT	Rasgrp3	RAS guanyl releasing protein 3	1	HSNLMDISSIPSYDWMR	HSNLMDISSIPSYDWMR	3	HSNLMDISSIPSYDWMR3	28115.7	49501.5	43889
A0A8I5Y1T6	A0A8I5Y1T6;A0A0G2K162	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	0	HSNLMLEDLDK	HSNLMLEDLDK	2	HSNLMLEDLDK2	11337	18673.5	19904.8
A0A8I5Y1T6	A0A8I5Y1T6;A0A0G2K162	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	0	HSNLMLEDLDK	HSNLMLEDLDK	3	HSNLMLEDLDK3	8281.75	8851.12	7588.09
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	HSNLVQLLGVIVEEK	HSNLVQLLGVIVEEK	2	HSNLVQLLGVIVEEK2	5465.36	11199.8	1193.33
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	HSNLVQLLGVIVEEK	HSNLVQLLGVIVEEK	3	HSNLVQLLGVIVEEK3	27381.5	55378.2	26488.9
D3ZDW3	D3ZDW3	D3ZDW3_RAT	Tsc22d2	TSC22 domain family, member 2	1	HSNTLEQTAER	HSNTLEQTAER	2	HSNTLEQTAER2		5608.84	
Q5XHZ9	Q5XHZ9	PCH2_RAT	Trip13	Pachytene checkpoint protein 2 homolog	1	HSNVVILTTSNITEK	HSNVVILTTSNITEK	3	HSNVVILTTSNITEK3	2368.92	1403.48	4741.51
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	HSPAYSFPAATQR	HSPAYSFPAATQR	2	HSPAYSFPAATQR2	5504.16	6012.82	5654.78
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	HSPAYSFPAATQR	HSPAYSFPAATQR	3	HSPAYSFPAATQR3	31825.6	26726.6	30976.8
G3V8R8	G3V8R8	G3V8R8_RAT	Kcnk6	Potassium channel subfamily K member	1	HSPCVAAHALDAFVER	HSPC(UniMod:4)VAAHALDAFVER	3	HSPC(UniMod:4)VAAHALDAFVER3	59771.8	57995.7	59272.8
G3V8R8	G3V8R8	G3V8R8_RAT	Kcnk6	Potassium channel subfamily K member	1	HSPCVAAHALDAFVER	HSPC(UniMod:4)VAAHALDAFVER	4	HSPC(UniMod:4)VAAHALDAFVER4	16005.2	20224.8	24558.9
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	HSPGEITGPGGHFMTSDSSLTK	HSPGEITGPGGHFMTSDSSLTK	4	HSPGEITGPGGHFMTSDSSLTK4	15334	18882.8	20155.9
Q4FZU4	Q4FZU4	ATL4_RAT	Adamtsl4	ADAMTS-like protein 4	1	HSPHMQPPELR	HSPHMQPPELR	3	HSPHMQPPELR3	4822.27		
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	HSPNCPFVK	HSPNC(UniMod:4)PFVK	2	HSPNC(UniMod:4)PFVK2	19485	17546.3	9838.76
Q5GF25	Q5GF25	MANEA_RAT	Manea	Glycoprotein endo-alpha-1,2-mannosidase	1	HSPPDDIGSSFYPELGSYSSR	HSPPDDIGSSFYPELGSYSSR	3	HSPPDDIGSSFYPELGSYSSR3	6330.92	5820.82	6311.65
Q9ET64	Q9ET64	NSMA_RAT	Smpd2	Sphingomyelin phosphodiesterase 2	1	HSPPQEDPCSAHGSAER	HSPPQEDPC(UniMod:4)SAHGSAER	3	HSPPQEDPC(UniMod:4)SAHGSAER3			26498.7
Q9ET64	Q9ET64	NSMA_RAT	Smpd2	Sphingomyelin phosphodiesterase 2	1	HSPPQEDPCSAHGSAER	HSPPQEDPC(UniMod:4)SAHGSAER	4	HSPPQEDPC(UniMod:4)SAHGSAER4			4050.48
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	HSPSIHQSVVAVSR	HSPSIHQSVVAVSR	3	HSPSIHQSVVAVSR3	6379.89	8983.3	12408.9
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	HSPSPQEISQWMFTHIAVVR	HSPSPQEISQWMFTHIAVVR	3	HSPSPQEISQWMFTHIAVVR3	6835.4		2477.39
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	HSPTEDEEIAK	HSPTEDEEIAK	2	HSPTEDEEIAK2	7394.72	4289.07	5200.95
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	HSQAVEELAEQLEQTK	HSQAVEELAEQLEQTK	2	HSQAVEELAEQLEQTK2	570255	584027	646785
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	HSQAVEELAEQLEQTK	HSQAVEELAEQLEQTK	3	HSQAVEELAEQLEQTK3	26006	37816.7	42383.9
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	HSQAVEELAEQLEQTKR	HSQAVEELAEQLEQTKR	3	HSQAVEELAEQLEQTKR3	973582	1.11828e+06	923090
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	HSQAVEELAEQLEQTKR	HSQAVEELAEQLEQTKR	4	HSQAVEELAEQLEQTKR4	1.28472e+06	2.72144e+06	2.10484e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	HSQAVEELAEQLEQTKRVK	HSQAVEELAEQLEQTKRVK	4	HSQAVEELAEQLEQTKRVK4	5957.37	6383.87	13193.3
Q5M890	Q5M890	Q5M890_RAT	Apon	Apolipoprotein N	1	HSQEEGIGNNEAILR	HSQEEGIGNNEAILR	3	HSQEEGIGNNEAILR3	4498.3	2313.75	
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	HSQEIAQFQTELAEAR	HSQEIAQFQTELAEAR	3	HSQEIAQFQTELAEAR3	5223.57	4082.08	3155.56
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	HSQEMIHR	HSQEMIHR	2	HSQEMIHR2			820.94
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	HSQFIGYPITLFVEK	HSQFIGYPITLFVEK	2	HSQFIGYPITLFVEK2	131271	153183	137205
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	HSQFIGYPITLFVEK	HSQFIGYPITLFVEK	3	HSQFIGYPITLFVEK3	1.06656e+06	1.09541e+06	1.07241e+06
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	HSQFIGYPITLFVEKER	HSQFIGYPITLFVEKER	3	HSQFIGYPITLFVEKER3	54316.9	73997.6	68016
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	HSQFIGYPITLFVEKER	HSQFIGYPITLFVEKER	4	HSQFIGYPITLFVEKER4	81268.3	70718.8	63029.3
P34058	P34058;A0A8I5ZYT7	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	HSQFIGYPITLYLEK	HSQFIGYPITLYLEK	2	HSQFIGYPITLYLEK2	183746	165377	113460
P34058	P34058;A0A8I5ZYT7	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	HSQFIGYPITLYLEK	HSQFIGYPITLYLEK	3	HSQFIGYPITLYLEK3	1.96497e+06	2.06144e+06	1.8682e+06
P34058	P34058;A0A8I5ZYT7	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	HSQFIGYPITLYLEKER	HSQFIGYPITLYLEKER	3	HSQFIGYPITLYLEKER3	20200.4	30135.7	26477.3
P34058	P34058;A0A8I5ZYT7	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	HSQFIGYPITLYLEKER	HSQFIGYPITLYLEKER	4	HSQFIGYPITLYLEKER4	6870.87	8546.65	12185.4
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	HSQGNTWLTAFVLK	HSQGNTWLTAFVLK	2	HSQGNTWLTAFVLK2	451884	420822	345981
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	HSQGNTWLTAFVLK	HSQGNTWLTAFVLK	3	HSQGNTWLTAFVLK3	4.75748e+06	4.94162e+06	4.13851e+06
D3ZUK4	D3ZUK4	D3ZUK4_RAT	Trim33	RING-type E3 ubiquitin transferase	1	HSQHYQIPDDFVADVR	HSQHYQIPDDFVADVR	3	HSQHYQIPDDFVADVR3	18807.5	8226.38	
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	HSQNGFIVPPPPEK	HSQNGFIVPPPPEK	2	HSQNGFIVPPPPEK2	12124.2	12766.2	11006.9
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	HSQNGFIVPPPPEK	HSQNGFIVPPPPEK	3	HSQNGFIVPPPPEK3	67018.7	75317.1	52136.6
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	HSQPATPTPLQNR	HSQPATPTPLQNR	2	HSQPATPTPLQNR2	26337.5	12476.3	14438.2
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	HSQPATPTPLQNR	HSQPATPTPLQNR	3	HSQPATPTPLQNR3	184933	136231	161170
A0A0G2K089	A0A0G2K089	A0A0G2K089_RAT	Dennd4c	DENN domain containing 4C	1	HSQPTPEPQSPTEPPAWGSSIVK	HSQPTPEPQSPTEPPAWGSSIVK	3	HSQPTPEPQSPTEPPAWGSSIVK3	2905.25	6623.05	
A0A0G2QC37	A0A0G2QC37	A0A0G2QC37_RAT	Dcp2	Decapping mRNA 2	1	HSQQLFPEGSPSDQWVK	HSQQLFPEGSPSDQWVK	3	HSQQLFPEGSPSDQWVK3	3756.45	5619.78	4999.43
A0A8I6A2I6	A0A8I6A2I6	A0A8I6A2I6_RAT	Frrs1	Ferric-chelate reductase 1	1	HSQQPLITYEK	HSQQPLITYEK	3	HSQQPLITYEK3	12659.9	18464.1	10367.1
F1M4J1	F1M4J1	F1M4J1_RAT	LOC100294508	Dyslexia susceptibility 2-like	1	HSQSLQLSK	HSQSLQLSK	2	HSQSLQLSK2	3717.17	3945.96	
Q562B5	Q562B5	PGAM5_RAT	Pgam5	Serine/threonine-protein phosphatase PGAM5, mitochondrial	1	HSQYNVDGSMEKDR	HSQYNVDGSMEKDR	3	HSQYNVDGSMEKDR3	5007.04	5683.52	11966.7
A0A8I6G5Q1	A0A8I6G5Q1	A0A8I6G5Q1_RAT	Sema4d	Semaphorin 4D	1	HSSCEDCVLAR	HSSC(UniMod:4)EDC(UniMod:4)VLAR	2	HSSC(UniMod:4)EDC(UniMod:4)VLAR2	3959.25	2456.52	5123.12
A0A8I6G5Q1	A0A8I6G5Q1	A0A8I6G5Q1_RAT	Sema4d	Semaphorin 4D	1	HSSCEDCVLAR	HSSC(UniMod:4)EDC(UniMod:4)VLAR	3	HSSC(UniMod:4)EDC(UniMod:4)VLAR3	24486.8	25282.9	33699.6
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	HSSDINHLVTQGR	HSSDINHLVTQGR	3	HSSDINHLVTQGR3	5995.33	10613.4	10202.2
D3ZQI6	D3ZQI6	D3ZQI6_RAT	Xpo4	Exportin 4	1	HSSEVDINTTLQILGSPGEK	HSSEVDINTTLQILGSPGEK	3	HSSEVDINTTLQILGSPGEK3	5419.58	7433.27	2723.34
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	HSSLAGCQIINYR	HSSLAGC(UniMod:4)QIINYR	2	HSSLAGC(UniMod:4)QIINYR2	64099.5	70687.1	75255.5
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	HSSLAGCQIINYR	HSSLAGC(UniMod:4)QIINYR	3	HSSLAGC(UniMod:4)QIINYR3	1.06606e+06	1.24269e+06	1.28746e+06
Q63493	Q63493	CD1D_RAT	Cd1d	Antigen-presenting glycoprotein CD1d	1	HSSLEGQDIILYWGGR	HSSLEGQDIILYWGGR	3	HSSLEGQDIILYWGGR3	18813.1	20465.7	14239.4
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	HSSLFVK	HSSLFVK	2	HSSLFVK2	11823.7	22081.1	11676.7
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	HSSLIDIESVPTYK	HSSLIDIESVPTYK	2	HSSLIDIESVPTYK2	182592	175964	130981
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	HSSLIDIESVPTYK	HSSLIDIESVPTYK	3	HSSLIDIESVPTYK3	483902	496061	522519
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	HSSLPTESDEDIAPAQR	HSSLPTESDEDIAPAQR	3	HSSLPTESDEDIAPAQR3	28826.4	34930	37435
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	HSSNPPLESHVGWVMDSR	HSSNPPLESHVGWVMDSR	4	HSSNPPLESHVGWVMDSR4	13030.7	5419.53	11980
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	HSSNSLPGLIVDLR	HSSNSLPGLIVDLR	3	HSSNSLPGLIVDLR3	26864.2	18303.1	19277.6
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	HSSPLVQQPVPR	HSSPLVQQPVPR	2	HSSPLVQQPVPR2	2436.69	2232.32	
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	HSSPLVQQPVPR	HSSPLVQQPVPR	3	HSSPLVQQPVPR3	47557.5	42268.3	45278
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	HSSPVGRPSIGSASSSVVASASGSK	HSSPVGRPSIGSASSSVVASASGSK	3	HSSPVGRPSIGSASSSVVASASGSK3	16371.3	15712.5	12596.4
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	HSSPVGRPSIGSASSSVVASASGSK	HSSPVGRPSIGSASSSVVASASGSK	4	HSSPVGRPSIGSASSSVVASASGSK4	121829	133736	122844
D4A4H5	D4A4H5	D4A4H5_RAT	Sdf2	Stromal cell derived factor 2	1	HSSTDVLLSVTGEQYGR	HSSTDVLLSVTGEQYGR	3	HSSTDVLLSVTGEQYGR3	5105.8	3403.01	2389.59
D4A4H5	D4A4H5	D4A4H5_RAT	Sdf2	Stromal cell derived factor 2	1	HSSTDVLLSVTGEQYGRPISGQK	HSSTDVLLSVTGEQYGRPISGQK	4	HSSTDVLLSVTGEQYGRPISGQK4	16260	19307.2	22603
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	HSSTGDSVDGDAPPGER	HSSTGDSVDGDAPPGER	3	HSSTGDSVDGDAPPGER3	23779.1	21123.5	28005.4
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	HSSTGDSVDGDAPPGERNPEATFLK	HSSTGDSVDGDAPPGERNPEATFLK	4	HSSTGDSVDGDAPPGERNPEATFLK4	9487.42	16571.6	21420
Q9JIL3	Q9JIL3	ILF3_RAT	Ilf3	Interleukin enhancer-binding factor 3	1	HSSVYPTQEELEAVQNMVSHTER	HSSVYPTQEELEAVQNMVSHTER	3	HSSVYPTQEELEAVQNMVSHTER3	4082.69	1214.69	1135.66
Q9JIL3	Q9JIL3	ILF3_RAT	Ilf3	Interleukin enhancer-binding factor 3	1	HSSVYPTQEELEAVQNMVSHTER	HSSVYPTQEELEAVQNMVSHTER	4	HSSVYPTQEELEAVQNMVSHTER4	15553.2	9328.8	4861.87
Q5FVN1	Q5FVN1	STBD1_RAT	Stbd1	Starch-binding domain-containing protein 1	1	HSSWGSVGLGGSLEASR	HSSWGSVGLGGSLEASR	3	HSSWGSVGLGGSLEASR3	5850.33	8868.98	13724.8
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	HSSYTHHTGSSLFGQPFLMAVPR	HSSYTHHTGSSLFGQPFLMAVPR	3	HSSYTHHTGSSLFGQPFLMAVPR3	9078.79	11996.8	8847.69
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	HSSYTHHTGSSLFGQPFLMAVPR	HSSYTHHTGSSLFGQPFLMAVPR	4	HSSYTHHTGSSLFGQPFLMAVPR4	60609.7	63670.9	52667.2
D3ZQJ3	D3ZQJ3	D3ZQJ3_RAT	Gigyf1	GRB10 interacting GYF protein 1	1	HSTAATALPLSHGAAR	HSTAATALPLSHGAAR	3	HSTAATALPLSHGAAR3	4429.33	4459.43	4620.79
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	HSTGIDIGDSLTIPDEFTEDEK	HSTGIDIGDSLTIPDEFTEDEK	3	HSTGIDIGDSLTIPDEFTEDEK3	7069.08		4514.29
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	HSTGIDIGDSLTIPDEFTEDEKK	HSTGIDIGDSLTIPDEFTEDEKK	3	HSTGIDIGDSLTIPDEFTEDEKK3	138998	119806	143300
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	HSTGIDIGDSLTIPDEFTEDEKK	HSTGIDIGDSLTIPDEFTEDEKK	4	HSTGIDIGDSLTIPDEFTEDEKK4	286249	211671	258026
D4AD75	D4AD75	D4AD75_RAT	Dpy19l1	Dpy-19 like C-mannosyltransferase 1	1	HSTKPDAVFAGAMPTMASVK	HSTKPDAVFAGAMPTMASVK	3	HSTKPDAVFAGAMPTMASVK3	4816.25	8969.41	3944.16
D3ZME7	D3ZME7	D3ZME7_RAT	Hscb	HscB mitochondrial iron-sulfur cluster co-chaperone	1	HSTLVNDAYK	HSTLVNDAYK	2	HSTLVNDAYK2	3010.11	3113.21	4591.27
Q9JM80	Q9JM80	PHAG1_RAT	Pag1	Phosphoprotein associated with glycosphingolipid-enriched microdomains 1	1	HSTNAESILGTSSDLDEETPPPVPVK	HSTNAESILGTSSDLDEETPPPVPVK	3	HSTNAESILGTSSDLDEETPPPVPVK3	11646.4	15104.7	11882
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	HSTQSLFEYMK	HSTQSLFEYMK	2	HSTQSLFEYMK2	8614.13	15434.9	9945.57
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	HSTQSLFEYMK	HSTQSLFEYMK	3	HSTQSLFEYMK3	26639	30243.7	18087.5
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	HSTSAVDLSTCFAQISHTAR	HSTSAVDLSTC(UniMod:4)FAQISHTAR	3	HSTSAVDLSTC(UniMod:4)FAQISHTAR3	23760.7	28102.8	28335.6
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	HSTSAVDLSTCFAQISHTAR	HSTSAVDLSTC(UniMod:4)FAQISHTAR	4	HSTSAVDLSTC(UniMod:4)FAQISHTAR4	48664.8	45169.9	32625.4
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	HSTSGTDEGDDGDEPGDGSNDVVDLLPR	HSTSGTDEGDDGDEPGDGSNDVVDLLPR	3	HSTSGTDEGDDGDEPGDGSNDVVDLLPR3	64764.3	74360.7	52699.9
Q3T1I4	Q3T1I4	PRRC1_RAT	Prrc1	Protein PRRC1	1	HSVESMITTLDPGMAPYIK	HSVESMITTLDPGMAPYIK	3	HSVESMITTLDPGMAPYIK3	18665.1	17485.6	17706.7
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	HSVFTAGK	HSVFTAGK	1	HSVFTAGK1		1294.22	
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	HSVFTAGK	HSVFTAGK	2	HSVFTAGK2	20943.1	18331.4	20563.3
B1WBY5	B1WBY5	B1WBY5_RAT	Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	1	HSVLGAAVSIGVPQGVSLK	HSVLGAAVSIGVPQGVSLK	3	HSVLGAAVSIGVPQGVSLK3	17652.9	15186.2	12745.2
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	HSVMMTFLSNMLR	HSVMMTFLSNMLR	2	HSVMMTFLSNMLR2	5535.13	12782.9	10931.1
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	HSVMMTFLSNMLR	HSVMMTFLSNMLR	3	HSVMMTFLSNMLR3	14370.7	29786.5	26117.5
P37727	P37727	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	1	HSVQCLVVDK	HSVQC(UniMod:4)LVVDK	2	HSVQC(UniMod:4)LVVDK2	3875.91	3589.1	2788.18
P37727	P37727	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	1	HSVQCLVVDKESR	HSVQC(UniMod:4)LVVDKESR	3	HSVQC(UniMod:4)LVVDKESR3	5572.8	16072.2	15723.5
O35462	O35462	ANGP2_RAT	Angpt2	Angiopoietin-2	1	HSVQLQSMK	HSVQLQSMK	2	HSVQLQSMK2		9139.42	3865.59
P14270	P14270	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	1	HSVSEMASNK	HSVSEMASNK	2	HSVSEMASNK2	13680.4		33676.9
F1M386	F1M386	RPGF2_RAT	Rapgef2	Rap guanine nucleotide exchange factor 2	1	HSVSIVESNLGVGR	HSVSIVESNLGVGR	3	HSVSIVESNLGVGR3	5940.97		7250.12
A0A8I5ZRG3	A0A8I5ZRG3	A0A8I5ZRG3_RAT	Frmd4b	FERM domain containing 4B	1	HSVSTSNSGSMPNLAQK	HSVSTSNSGSMPNLAQK	3	HSVSTSNSGSMPNLAQK3	10540.8	12158.2	13105.9
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	HSVVIPLK	HSVVIPLK	2	HSVVIPLK2	417521	522358	547811
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	HSVVSVR	HSVVSVR	2	HSVVSVR2		10394.3	
A0A8I6GBE0	A0A8I6GBE0	A0A8I6GBE0_RAT	Dpp9	Dipeptidyl peptidase 9	1	HSWDGLR	HSWDGLR	2	HSWDGLR2	4335.11	3176.65	
A0A8I6GKX8	A0A8I6GKX8	A0A8I6GKX8_RAT	Iqsec2	IQ motif and Sec7 domain ArfGEF 2	1	HSWDSPAFNNDVVQR	HSWDSPAFNNDVVQR	3	HSWDSPAFNNDVVQR3	4359.98	3024.25	6079.82
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	HSWLQECVLSLSPTSDLMVIAR	HSWLQEC(UniMod:4)VLSLSPTSDLMVIAR	3	HSWLQEC(UniMod:4)VLSLSPTSDLMVIAR3	16120.7	16034.4	8596.1
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	HSYETTAK	HSYETTAK	2	HSYETTAK2			9082.21
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	HSYLHLAENHFIR	HSYLHLAENHFIR	3	HSYLHLAENHFIR3		4406.05	8511.74
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	HSYLHLAENHFIR	HSYLHLAENHFIR	4	HSYLHLAENHFIR4	31890	42359.8	43603.3
A0A8I5Y6A1	A0A8I5Y6A1	A0A8I5Y6A1_RAT	Ablim1	Actin-binding LIM protein 1	1	HSYTPTTSR	HSYTPTTSR	2	HSYTPTTSR2			3205.71
Q6P742	Q6P742	PLP2_RAT	Plp2	Proteolipid protein 2	1	HTAAPTDPTDGP	HTAAPTDPTDGP	2	HTAAPTDPTDGP2	6177.5	6854.35	6507.18
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	HTAAQLGEK	HTAAQLGEK	2	HTAAQLGEK2			2888.85
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	HTALAANTQSQQSIHTTTLAR	HTALAANTQSQQSIHTTTLAR	4	HTALAANTQSQQSIHTTTLAR4	2879.57	939.347	6911.41
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	HTALMKPIVFALEHVR	HTALMKPIVFALEHVR	4	HTALMKPIVFALEHVR4		4167.02	1457.16
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	HTAMVSWGGVSIPNSPFR	HTAMVSWGGVSIPNSPFR	2	HTAMVSWGGVSIPNSPFR2	570248	506627	471641
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	HTAMVSWGGVSIPNSPFR	HTAMVSWGGVSIPNSPFR	3	HTAMVSWGGVSIPNSPFR3	3.09572e+06	3.21322e+06	3.43637e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	HTAMVSWGGVSIPNSPFR	HTAMVSWGGVSIPNSPFR	4	HTAMVSWGGVSIPNSPFR4	5613.86	9844.25	9421.51
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	HTAMVSWGGVSIPNSPFRVNVGAGSHPNK	HTAMVSWGGVSIPNSPFRVNVGAGSHPNK	4	HTAMVSWGGVSIPNSPFRVNVGAGSHPNK4	11333.6	9654.66	1683.03
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	HTAQIEIVR	HTAQIEIVR	2	HTAQIEIVR2	24512.7	21196.3	15645.8
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	HTASWAVIPK	HTASWAVIPK	2	HTASWAVIPK2	9815.43	7772.6	7316.51
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	HTATVGEALLR	HTATVGEALLR	3	HTATVGEALLR3	38423.6	35651.8	35896.6
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	HTAVICTSR	HTAVIC(UniMod:4)TSR	2	HTAVIC(UniMod:4)TSR2	24626.8	17037.7	17372.4
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	HTCEQGDGVGPYGWEFHDGLSFGR	HTC(UniMod:4)EQGDGVGPYGWEFHDGLSFGR	3	HTC(UniMod:4)EQGDGVGPYGWEFHDGLSFGR3	6936.44		
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	HTCEQGDGVGPYGWEFHDGLSFGR	HTC(UniMod:4)EQGDGVGPYGWEFHDGLSFGR	4	HTC(UniMod:4)EQGDGVGPYGWEFHDGLSFGR4	20363.4	27981.9	19686.9
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	HTCSALCSGQVFTGR	HTC(UniMod:4)SALC(UniMod:4)SGQVFTGR	2	HTC(UniMod:4)SALC(UniMod:4)SGQVFTGR2	35781.1	52058.9	40848.6
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	HTCSALCSGQVFTGR	HTC(UniMod:4)SALC(UniMod:4)SGQVFTGR	3	HTC(UniMod:4)SALC(UniMod:4)SGQVFTGR3	610438	783056	780005
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	HTCVLIAPPPNPCLDGSHTCAPEGQAR	HTC(UniMod:4)VLIAPPPNPC(UniMod:4)LDGSHTC(UniMod:4)APEGQAR	4	HTC(UniMod:4)VLIAPPPNPC(UniMod:4)LDGSHTC(UniMod:4)APEGQAR4	22558.5	26080.6	20011.3
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	HTCVTFLER	HTC(UniMod:4)VTFLER	2	HTC(UniMod:4)VTFLER2	13636.5	25769.7	13462.9
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	HTCVTFLER	HTC(UniMod:4)VTFLER	3	HTC(UniMod:4)VTFLER3		2653.71	7027.84
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	HTDAIPDPR	HTDAIPDPR	2	HTDAIPDPR2	981609	854579	874513
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	HTDDEMTGYVATR	HTDDEMTGYVATR	2	HTDDEMTGYVATR2	12517.7	15878.8	20511.1
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	HTDDEMTGYVATR	HTDDEMTGYVATR	3	HTDDEMTGYVATR3	303078	368958	357741
F1M784	F1M784	F1M784_RAT	Pik3ap1	Phosphoinositide-3-kinase adaptor protein 1	1	HTDLPLETSPGNLMVVQPDR	HTDLPLETSPGNLMVVQPDR	3	HTDLPLETSPGNLMVVQPDR3	9674.51	12607.2	6057.87
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	HTDNTVQWLR	HTDNTVQWLR	2	HTDNTVQWLR2	12224.2	13642.8	6080.14
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	HTDNTVQWLR	HTDNTVQWLR	3	HTDNTVQWLR3	38576.3	42389.3	68009.7
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	HTDNVIQWLNAMDEIGLPK	HTDNVIQWLNAMDEIGLPK	3	HTDNVIQWLNAMDEIGLPK3	28533.8	32566.6	25850.8
P11507	Q64578;P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	0	HTDPVPDPR	HTDPVPDPR	2	HTDPVPDPR2	356456	236382	303561
Q3KR57	Q3KR57	Q3KR57_RAT	Grap2	GRB2-related adaptor protein 2	1	HTDPVQLQAAGR	HTDPVQLQAAGR	2	HTDPVQLQAAGR2	2230.94		
Q3KR57	Q3KR57	Q3KR57_RAT	Grap2	GRB2-related adaptor protein 2	1	HTDPVQLQAAGR	HTDPVQLQAAGR	3	HTDPVQLQAAGR3	5609.51	3977.53	5602.41
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	HTDQEELVK	HTDQEELVK	2	HTDQEELVK2	3636.6	4626.46	4656.05
Q9WVR7	Q9WVR7	PPM1F_RAT	Ppm1f	Protein phosphatase 1F	1	HTDQMFLQK	HTDQMFLQK	2	HTDQMFLQK2	4122.93	4264.31	
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	HTDSLFPILLQTLSDESDEVVLK	HTDSLFPILLQTLSDESDEVVLK	3	HTDSLFPILLQTLSDESDEVVLK3	4811.12	14293.5	6519.86
B5DF86	B5DF86	B5DF86_RAT	Cog8	Conserved oligomeric Golgi complex subunit 8	1	HTEILEILEIPQLMDTCVR	HTEILEILEIPQLMDTC(UniMod:4)VR	3	HTEILEILEIPQLMDTC(UniMod:4)VR3	15056.3	18714	7342.05
P36953	P36953	AFAM_RAT	Afm	Afamin	1	HTELSTPELLR	HTELSTPELLR	2	HTELSTPELLR2	17588	14313.3	11972
P36953	P36953	AFAM_RAT	Afm	Afamin	1	HTELSTPELLR	HTELSTPELLR	3	HTELSTPELLR3	138882	110878	133529
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	HTEMIHNYMEHLER	HTEMIHNYMEHLER	3	HTEMIHNYMEHLER3		6715.49	6455.67
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	HTEMIHNYMEHLER	HTEMIHNYMEHLER	4	HTEMIHNYMEHLER4	17474.6	16808.9	21011.4
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	HTETAEVLLER	HTETAEVLLER	3	HTETAEVLLER3	14767.2	12109.1	9420.72
A0A8I6A9E8	A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	1	HTEYMEFLK	HTEYMEFLK	2	HTEYMEFLK2	7617.08	6766.65	6887.33
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	HTFCAGLTK	HTFC(UniMod:4)AGLTK	2	HTFC(UniMod:4)AGLTK2	585009	451712	430893
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	HTFEEAEK	HTFEEAEK	2	HTFEEAEK2	11094.3	7094.25	14020.1
D3ZJZ0	D3ZJZ0	D3ZJZ0_RAT	Tmem205	Transmembrane protein 205	1	HTFGLVQSK	HTFGLVQSK	2	HTFGLVQSK2	95190.6	75289.8	44411.8
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	HTFLNIAEHFEK	HTFLNIAEHFEK	3	HTFLNIAEHFEK3	9357.61	5092.71	9458.53
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	HTFSPVIK	HTFSPVIK	2	HTFSPVIK2	38435.2	51206.2	35494.9
B5DF48	B5DF48	B5DF48_RAT	Tyw1	tRNA 4-demethylwyosine synthase (AdoMet-dependent)	1	HTFYGIESHR	HTFYGIESHR	3	HTFYGIESHR3	16018.8	14309.9	
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	HTGAVLK	HTGAVLK	1	HTGAVLK1	8137.6		
P10111	M0RCZ9;P10111;A0A8I6A629	PPIA_RAT	Ppia	Peptidyl-prolyl cis-trans isomerase A	0	HTGPGILSMANAGPNTNGSQFFICTAK	HTGPGILSMANAGPNTNGSQFFIC(UniMod:4)TAK	3	HTGPGILSMANAGPNTNGSQFFIC(UniMod:4)TAK3	302565	257018	278397
P10111	M0RCZ9;P10111;A0A8I6A629	PPIA_RAT	Ppia	Peptidyl-prolyl cis-trans isomerase A	0	HTGPGILSMANAGPNTNGSQFFICTAK	HTGPGILSMANAGPNTNGSQFFIC(UniMod:4)TAK	4	HTGPGILSMANAGPNTNGSQFFIC(UniMod:4)TAK4	5567.37		5368.23
Q8VHV7	Q8VHV7;Q6AY09	HNRH1_RAT	Hnrnph1	Heterogeneous nuclear ribonucleoprotein H	0	HTGPNSPDTANDGFVR	HTGPNSPDTANDGFVR	2	HTGPNSPDTANDGFVR2	3425.21		
Q8VHV7	Q8VHV7;Q6AY09	HNRH1_RAT	Hnrnph1	Heterogeneous nuclear ribonucleoprotein H	0	HTGPNSPDTANDGFVR	HTGPNSPDTANDGFVR	3	HTGPNSPDTANDGFVR3	12633.5	8650.47	4169.1
F1M3Y4	F1M3Y4	F1M3Y4_RAT	LOC100361052	Ig-like domain-containing protein	1	HTGVPDR	HTGVPDR	1	HTGVPDR1			13505.4
F1M3Y4	F1M3Y4	F1M3Y4_RAT	LOC100361052	Ig-like domain-containing protein	1	HTGVPDR	HTGVPDR	2	HTGVPDR2			2.12768e+06
Q5U2R4	Q5U2R4	TM10C_RAT	Trmt10c	tRNA methyltransferase 10 homolog C	1	HTGYLEVPEHSQAAFR	HTGYLEVPEHSQAAFR	4	HTGYLEVPEHSQAAFR4	4410.81	8018.43	6143.38
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	HTGYVGLK	HTGYVGLK	2	HTGYVGLK2	24074.2	24986.3	32038.3
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	HTGYVIELQHVVR	HTGYVIELQHVVR	3	HTGYVIELQHVVR3	7568.67	11325.9	11180.4
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	HTGYVIELQHVVR	HTGYVIELQHVVR	4	HTGYVIELQHVVR4	10724	4797.82	15180.7
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	HTHDPMEK	HTHDPMEK	2	HTHDPMEK2			17232.2
B0BMY7	B0BMY7	B0BMY7_RAT	Twf2	Twinfilin actin-binding protein 2	1	HTHEGDSLESVVFIYSMPGYK	HTHEGDSLESVVFIYSMPGYK	3	HTHEGDSLESVVFIYSMPGYK3	12646	5076.58	9907.08
B0BMY7	B0BMY7	B0BMY7_RAT	Twf2	Twinfilin actin-binding protein 2	1	HTHEGDSLESVVFIYSMPGYK	HTHEGDSLESVVFIYSMPGYK	4	HTHEGDSLESVVFIYSMPGYK4	11148.8	4341.62	7739.5
Q66HG5	Q66HG5	TM9S2_RAT	Tm9sf2	Transmembrane 9 superfamily member 2	1	HTHIDKPDCSGPAMDISNK	HTHIDKPDC(UniMod:4)SGPAMDISNK	3	HTHIDKPDC(UniMod:4)SGPAMDISNK3	2452.36	13613.5	4673.94
Q66HG5	Q66HG5	TM9S2_RAT	Tm9sf2	Transmembrane 9 superfamily member 2	1	HTHIDKPDCSGPAMDISNK	HTHIDKPDC(UniMod:4)SGPAMDISNK	4	HTHIDKPDC(UniMod:4)SGPAMDISNK4	302305	346720	344904
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	HTHLFALGEVK	HTHLFALGEVK	2	HTHLFALGEVK2	357686	144629	226343
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	HTHLFALGEVK	HTHLFALGEVK	3	HTHLFALGEVK3	405964	334458	293702
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	HTHLFALGEVKSADR	HTHLFALGEVKSADR	4	HTHLFALGEVKSADR4	4615.49	4886.64	7110.07
P01048	P01048	KNT1_RAT	Map1	T-kininogen 1	1	HTHLFALR	HTHLFALR	2	HTHLFALR2	26887	20554.6	23008.3
A0A0G2KA54	P08932;A0A0G2KA54	A0A0G2KA54_RAT	Kng1	Kininogen 1	0	HTHLFALTEVK	HTHLFALTEVK	2	HTHLFALTEVK2	9138.67	7176.98	5694.7
A0A0G2KA54	P08932;A0A0G2KA54	A0A0G2KA54_RAT	Kng1	Kininogen 1	0	HTHLFALTEVK	HTHLFALTEVK	3	HTHLFALTEVK3	395024	428972	412548
A0A140TAA1	A0A140TAA1	A0A140TAA1_RAT	Igsf8	Immunoglobulin superfamily, member 8	1	HTHLSVSFGR	HTHLSVSFGR	3	HTHLSVSFGR3	7494.86	6541.79	8937.89
Q9ESC1	Q9ESC1	AGRL4_RAT	Adgrl4	Adhesion G protein-coupled receptor L4	1	HTHPHMNVDGGYVK	HTHPHMNVDGGYVK	3	HTHPHMNVDGGYVK3	30904.9	35974.5	12369.2
Q9ESC1	Q9ESC1	AGRL4_RAT	Adgrl4	Adhesion G protein-coupled receptor L4	1	HTHPHMNVDGGYVK	HTHPHMNVDGGYVK	4	HTHPHMNVDGGYVK4	133353	164364	141619
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	HTIAVVWGGVNIPHSPYR	HTIAVVWGGVNIPHSPYR	4	HTIAVVWGGVNIPHSPYR4	7895.07	5618.06	4762.65
D4A1Y5	D4A1Y5	D4A1Y5_RAT	Mthfd2	methenyltetrahydrofolate cyclohydrolase	1	HTILADIVISAAGIPNLITADMIK	HTILADIVISAAGIPNLITADMIK	3	HTILADIVISAAGIPNLITADMIK3	2928.08		
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	HTIPEEETHR	HTIPEEETHR	2	HTIPEEETHR2	5052.69		41942.2
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	HTIPEEETHR	HTIPEEETHR	3	HTIPEEETHR3	233161		91705.7
B0BMY6	B0BMY6	B0BMY6_RAT	Otulin	ubiquitinyl hydrolase 1	1	HTIQVYR	HTIQVYR	2	HTIQVYR2	1462.15	3596.99	
Q6AY20	Q6AY20;A0A8I6A547	MPRD_RAT	M6pr	Cation-dependent mannose-6-phosphate receptor	0	HTLAGNFNPVSEER	HTLAGNFNPVSEER	2	HTLAGNFNPVSEER2	21654.3	21040.3	14581.8
Q6AY20	Q6AY20;A0A8I6A547	MPRD_RAT	M6pr	Cation-dependent mannose-6-phosphate receptor	0	HTLAGNFNPVSEER	HTLAGNFNPVSEER	3	HTLAGNFNPVSEER3	143857	128222	173523
P54645	P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	1	HTLDELNPQK	HTLDELNPQK	2	HTLDELNPQK2	11081.4	14910.1	9547.02
P54645	P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	1	HTLDELNPQK	HTLDELNPQK	3	HTLDELNPQK3	18882.7	21238.8	29673
Q9QYW3	Q9QYW3	PHOCN_RAT	Mob4	MOB-like protein phocein	1	HTLDGAACLLNSNK	HTLDGAAC(UniMod:4)LLNSNK	2	HTLDGAAC(UniMod:4)LLNSNK2	15693.2	14021.8	15481.3
Q9QYW3	Q9QYW3	PHOCN_RAT	Mob4	MOB-like protein phocein	1	HTLDGAACLLNSNK	HTLDGAAC(UniMod:4)LLNSNK	3	HTLDGAAC(UniMod:4)LLNSNK3	23895	35541.3	33688.1
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	HTLPGAHQTTNLSSSLPASSQPR	HTLPGAHQTTNLSSSLPASSQPR	4	HTLPGAHQTTNLSSSLPASSQPR4	12256.2	18060.3	12979.1
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	HTLQNINSVQLK	HTLQNINSVQLK	2	HTLQNINSVQLK2	17497.9	13156.6	5745.26
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	HTLQNINSVQLK	HTLQNINSVQLK	3	HTLQNINSVQLK3	83711.1	56550.6	56706.4
D3ZWE3	D3ZWE3	D3ZWE3_RAT	Pof1b	POF1B, actin binding protein	1	HTLSDMEYR	HTLSDMEYR	2	HTLSDMEYR2	1816.41	2581.08	1525.19
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	HTLSYVDTK	HTLSYVDTK	2	HTLSYVDTK2	50321.7	56963.4	68304.7
F7ELS2	F7ELS2;A0A8I6GM53	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	0	HTLTQIK	HTLTQIK	2	HTLTQIK2	187140	189009	147482
P26431	P26431	SL9A1_RAT	Slc9a1	Sodium/hydrogen exchanger 1	1	HTLVADPYEEAWNQMLLR	HTLVADPYEEAWNQMLLR	3	HTLVADPYEEAWNQMLLR3	31786.9	31839.3	30543.7
Q5I0H9	Q5I0H9	PDIA5_RAT	Pdia5	Protein disulfide-isomerase A5	1	HTLVMFYAPWCPHCK	HTLVMFYAPWC(UniMod:4)PHC(UniMod:4)K	3	HTLVMFYAPWC(UniMod:4)PHC(UniMod:4)K3	8218.44	8831.24	10415.4
G3V7N0	G3V7N0	G3V7N0_RAT	Hs2st1	Heparan sulfate 2-O-sulfotransferase 1	1	HTMDGPR	HTMDGPR	2	HTMDGPR2			17698
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	HTMMFSATFPK	HTMMFSATFPK	2	HTMMFSATFPK2	8273.11	17441.6	14152.7
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	HTMMFSATFPK	HTMMFSATFPK	3	HTMMFSATFPK3	10148	8641.9	7104.03
O08874	O08874	PKN2_RAT	Pkn2	Serine/threonine-protein kinase N2	1	HTNEMFAIK	HTNEMFAIK	2	HTNEMFAIK2	796.811	3164.1	
P62744	P62744	AP2S1_RAT	Ap2s1	AP-2 complex subunit sigma	1	HTNFVEFR	HTNFVEFR	2	HTNFVEFR2	23642.6	21494.3	11966.5
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	HTNLLSQACGESR	HTNLLSQAC(UniMod:4)GESR	3	HTNLLSQAC(UniMod:4)GESR3	4890.62	5018.22	7291.74
Q9Z1P2	A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	HTNYTMEHIR	HTNYTMEHIR	2	HTNYTMEHIR2	199690	240007	185840
Q9Z1P2	A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	HTNYTMEHIR	HTNYTMEHIR	3	HTNYTMEHIR3	4.96518e+06	50747.7	5.51313e+06
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	HTNYTMEHLR	HTNYTMEHLR	2	HTNYTMEHLR2	23147.2	26923	26954.9
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	HTNYTMEHLR	HTNYTMEHLR	3	HTNYTMEHLR3	813859	843369	863456
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	HTPDVVLDTLEPLK	HTPDVVLDTLEPLK	3	HTPDVVLDTLEPLK3	7550.14	11392.2	8750.26
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	HTPLYER	HTPLYER	2	HTPLYER2	64940.3	65928.6	78362.3
A0A8I5ZLD3	A0A8I5ZLD3	A0A8I5ZLD3_RAT	Abi2	Abl-interactor 2	1	HTPPTIGGSLPYR	HTPPTIGGSLPYR	2	HTPPTIGGSLPYR2	8160.05	6733.87	9554.42
A0A8I5ZLD3	A0A8I5ZLD3	A0A8I5ZLD3_RAT	Abi2	Abl-interactor 2	1	HTPPTIGGSLPYR	HTPPTIGGSLPYR	3	HTPPTIGGSLPYR3	18529.9	17419.5	24599.9
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	HTPSSHPDHSLLQDALR	HTPSSHPDHSLLQDALR	3	HTPSSHPDHSLLQDALR3		6326.74	5622.14
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	HTPSSHPDHSLLQDALR	HTPSSHPDHSLLQDALR	4	HTPSSHPDHSLLQDALR4	39753.6	49782.7	37897.4
A0A8I5ZS34	A0A8I5ZS34	A0A8I5ZS34_RAT	Ctdsp1	protein-serine/threonine phosphatase	1	HTPVQYLLPEVK	HTPVQYLLPEVK	3	HTPVQYLLPEVK3	27634.8	26096.8	23952.3
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	HTQDSDVIEDVMVR	HTQDSDVIEDVMVR	2	HTQDSDVIEDVMVR2	33476.9	27084.7	29078.3
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	HTQDSDVIEDVMVR	HTQDSDVIEDVMVR	3	HTQDSDVIEDVMVR3	209934	342307	386266
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	HTQDTTEKENLR	HTQDTTEKENLR	2	HTQDTTEKENLR2			2575.61
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	HTQDTTEKENLR	HTQDTTEKENLR	3	HTQDTTEKENLR3			1230.29
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	HTQENCETWGVNGETGTLVDMK	HTQENC(UniMod:4)ETWGVNGETGTLVDMK	3	HTQENC(UniMod:4)ETWGVNGETGTLVDMK3	13699.2	18924.7	20247.4
Q5RK30	Q5RK30	SBDS_RAT	Sbds	Ribosome maturation protein SBDS	1	HTQLEQMFR	HTQLEQMFR	2	HTQLEQMFR2	2184.49	3988	4901.53
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	HTQLSVLVVPTILGEPEK	HTQLSVLVVPTILGEPEK	3	HTQLSVLVVPTILGEPEK3		32957.4	
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	HTQVCINGQCAGSICEK	HTQVC(UniMod:4)INGQC(UniMod:4)AGSIC(UniMod:4)EK	3	HTQVC(UniMod:4)INGQC(UniMod:4)AGSIC(UniMod:4)EK3	28598.2	15223.9	20269.8
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	HTQWGIDFLER	HTQWGIDFLER	2	HTQWGIDFLER2	80343.2	52571.2	67154.8
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	HTQWGIDFLER	HTQWGIDFLER	3	HTQWGIDFLER3	339976	379004	379136
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	HTQWGIDILEK	HTQWGIDILEK	2	HTQWGIDILEK2	5097.05	14481.6	3637.64
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	HTQWGIDILEK	HTQWGIDILEK	3	HTQWGIDILEK3	17547.7	29175.3	28786.7
P97531	P97531	CIP4_RAT	Trip10	Cdc42-interacting protein 4	1	HTQWGLDLLDK	HTQWGLDLLDK	2	HTQWGLDLLDK2	6139.47	9592.16	4631.87
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	HTSALCNSCR	HTSALC(UniMod:4)NSC(UniMod:4)R	2	HTSALC(UniMod:4)NSC(UniMod:4)R2			200746
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	HTSALCNSCR	HTSALC(UniMod:4)NSC(UniMod:4)R	3	HTSALC(UniMod:4)NSC(UniMod:4)R3			338364
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	HTSMSQPQK	HTSMSQPQK	2	HTSMSQPQK2			14493.9
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	HTSSWLVTPK	HTSSWLVTPK	2	HTSSWLVTPK2	391824	288487	281914
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	HTSSWLVTPK	HTSSWLVTPK	3	HTSSWLVTPK3	62846.4	42383.1	39608.6
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	HTSYISGPWFDMYLTAR	HTSYISGPWFDMYLTAR	3	HTSYISGPWFDMYLTAR3	9910.56	5325.39	6897.94
B2RZ97	B2RZ97	B2RZ97_RAT	Kcmf1	E3 ubiquitin-protein ligase KCMF1	1	HTTDHPMQCILTR	HTTDHPMQC(UniMod:4)ILTR	3	HTTDHPMQC(UniMod:4)ILTR3	40308.3	42265.3	37130.8
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	HTTIFEVLPQK	HTTIFEVLPQK	2	HTTIFEVLPQK2	2.14651e+06	2.19265e+06	2.12176e+06
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	HTTIFEVLPQK	HTTIFEVLPQK	3	HTTIFEVLPQK3	1.9766e+06	2.17222e+06	2.29235e+06
D3ZIY3	D3ZIY3	D3ZIY3_RAT	Ythdf3	YTH domain-containing family protein	1	HTTSIFDDFAHYEK	HTTSIFDDFAHYEK	3	HTTSIFDDFAHYEK3	24677.7	3097.51	
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	HTTSLLGL	HTTSLLGL	2	HTTSLLGL2	45730.2	42444.6	30784.4
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	HTVDDGLDIR	HTVDDGLDIR	2	HTVDDGLDIR2	131037	119304	98212.4
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	HTVDDGLDIR	HTVDDGLDIR	3	HTVDDGLDIR3	21177.2	26192.3	30242.4
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	HTVDDGLDIRK	HTVDDGLDIRK	2	HTVDDGLDIRK2	4682.32	5948.76	4891.11
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	HTVDDGLDIRK	HTVDDGLDIRK	3	HTVDDGLDIRK3	217856	275338	238526
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	HTVDDGLDVR	HTVDDGLDVR	2	HTVDDGLDVR2	19231	12284.5	13599.2
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	HTVDDGLDVRK	HTVDDGLDVRK	3	HTVDDGLDVRK3	12642.6	46506.8	29170
Q9JJM9	Q9JJM9	SEPT5_RAT	Septin5	Septin-5	1	HTVDIEEK	HTVDIEEK	2	HTVDIEEK2	47525.5	21937.7	54478.1
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	HTVDQTRPGAFER	HTVDQTRPGAFER	3	HTVDQTRPGAFER3	86174.3	190853	143146
Q9EPQ0	Q9EPQ0	NCKX3_RAT	Slc24a3	Sodium/potassium/calcium exchanger 3 (Fragment)	1	HTVENGTGPSSAPDR	HTVENGTGPSSAPDR	3	HTVENGTGPSSAPDR3	14342.8	15210.8	14838.1
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	HTVFVLDDGTVYTCGCNDLGQLGHEK	HTVFVLDDGTVYTC(UniMod:4)GC(UniMod:4)NDLGQLGHEK	4	HTVFVLDDGTVYTC(UniMod:4)GC(UniMod:4)NDLGQLGHEK4	3740.81	5262.15	8963.8
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	HTVMDMCSQVFCPPLK	HTVMDMC(UniMod:4)SQVFC(UniMod:4)PPLK	2	HTVMDMC(UniMod:4)SQVFC(UniMod:4)PPLK2	8358.67	6132.77	
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	HTVMDMCSQVFCPPLK	HTVMDMC(UniMod:4)SQVFC(UniMod:4)PPLK	3	HTVMDMC(UniMod:4)SQVFC(UniMod:4)PPLK3	43647.8	56468.9	44336.3
P41565	P41565	IDHG1_RAT	Idh3g	Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial	1	HTVTMIPGDGIGPELMLHVK	HTVTMIPGDGIGPELMLHVK	3	HTVTMIPGDGIGPELMLHVK3	45787.2	24336.1	39372.9
P41565	P41565	IDHG1_RAT	Idh3g	Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial	1	HTVTMIPGDGIGPELMLHVK	HTVTMIPGDGIGPELMLHVK	4	HTVTMIPGDGIGPELMLHVK4	28147.6	36852.9	34432.1
Q64232	Q64232	TECR_RAT	Tecr	Very-long-chain enoyl-CoA reductase	1	HTVVHLACMCHSFHYIK	HTVVHLAC(UniMod:4)MC(UniMod:4)HSFHYIK	4	HTVVHLAC(UniMod:4)MC(UniMod:4)HSFHYIK4	22743.5	26190.1	14011.1
Q6AY55	Q6AY55	DCAKD_RAT	Dcakd	Dephospho-CoA kinase domain-containing protein	1	HTVVVYCDR	HTVVVYC(UniMod:4)DR	2	HTVVVYC(UniMod:4)DR2	2265.29	1215.51	
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	HTVYAALQDFSQVTLR	HTVYAALQDFSQVTLR	2	HTVYAALQDFSQVTLR2	2201.59		2748.6
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	HTVYAALQDFSQVTLR	HTVYAALQDFSQVTLR	3	HTVYAALQDFSQVTLR3	2603.16	7082.63	
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	HTVYAALQDFSQVTLREPLR	HTVYAALQDFSQVTLREPLR	3	HTVYAALQDFSQVTLREPLR3	19617.6	21316.5	22448.8
Q5XII9	Q5XII9	MFR1L_RAT	Mtfr1l	Mitochondrial fission regulator 1-like	1	HTWKPSPLIVMQR	HTWKPSPLIVMQR	3	HTWKPSPLIVMQR3	3884.2	6113.04	6011.26
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	HTWSNNLAVLECLQDVR	HTWSNNLAVLEC(UniMod:4)LQDVR	3	HTWSNNLAVLEC(UniMod:4)LQDVR3	4509.42	3406.5	
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	HTYGQKPSLSTEDAQEEESIPK	HTYGQKPSLSTEDAQEEESIPK	3	HTYGQKPSLSTEDAQEEESIPK3	126561	102999	99898.5
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	HTYGQKPSLSTEDAQEEESIPK	HTYGQKPSLSTEDAQEEESIPK	4	HTYGQKPSLSTEDAQEEESIPK4	628091	791443	848643
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	HTYLLRPSQFYGELCDFSDK	HTYLLRPSQFYGELC(UniMod:4)DFSDK	4	HTYLLRPSQFYGELC(UniMod:4)DFSDK4	5837.41	7880.87	8876.27
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	HTYLLRPSQFYGELCDFSDKEVEDCVTNR	HTYLLRPSQFYGELC(UniMod:4)DFSDKEVEDC(UniMod:4)VTNR	4	HTYLLRPSQFYGELC(UniMod:4)DFSDKEVEDC(UniMod:4)VTNR4	37926.9	54191.2	33767.4
Q9QZ81	Q9QZ81;F1LUS2;F1LUQ5;A0A8I5ZP12	AGO2_RAT	Ago2	Protein argonaute-2	0	HTYLPLEVCNIVAGQR	HTYLPLEVC(UniMod:4)NIVAGQR	3	HTYLPLEVC(UniMod:4)NIVAGQR3	4133.06		1733.86
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	HVAAGTQQPYTDGVR	HVAAGTQQPYTDGVR	2	HVAAGTQQPYTDGVR2	1676.94		6011.97
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	HVAAGTQQPYTDGVR	HVAAGTQQPYTDGVR	3	HVAAGTQQPYTDGVR3	50550.8	8399.89	33148.2
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	HVAAIGPR	HVAAIGPR	2	HVAAIGPR2	45154.5	41539	50007.3
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	HVAALLDIR	HVAALLDIR	2	HVAALLDIR2	10205.8	6910.87	14203
P51111	P51111	HD_RAT	Htt	Huntingtin	1	HVAATTLTR	HVAATTLTR	2	HVAATTLTR2	71068.8	102527	146035
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	HVAEVLEYTK	HVAEVLEYTK	2	HVAEVLEYTK2	150806	168944	129118
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	HVAEVLEYTK	HVAEVLEYTK	3	HVAEVLEYTK3	17431.5	15194.8	25998.6
D4A830	D4A830	D4A830_RAT	Ppa2	inorganic diphosphatase	1	HVAGHYISPFHDIPLK	HVAGHYISPFHDIPLK	3	HVAGHYISPFHDIPLK3	4844.6	3787.22	
D4A830	D4A830	D4A830_RAT	Ppa2	inorganic diphosphatase	1	HVAGHYISPFHDIPLK	HVAGHYISPFHDIPLK	4	HVAGHYISPFHDIPLK4	11518	16583.1	11258.3
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	HVAGLWAAVR	HVAGLWAAVR	2	HVAGLWAAVR2	67056.7	77959	67632.1
Q5M823	Q5M823	NUDC2_RAT	Nudcd2	NudC domain-containing protein 2	1	HVALAVGGR	HVALAVGGR	2	HVALAVGGR2	12595.4	12981.9	12694.4
Q04400	Q04400	ADCY5_RAT	Adcy5	Adenylate cyclase type 5	1	HVAMEMK	HVAMEMK	2	HVAMEMK2	25796	20223.2	22384.9
A0A0G2K6C7	A0A0G2K6C7	A0A0G2K6C7_RAT	Trim5	Tripartite motif-containing 5	1	HVANIVER	HVANIVER	2	HVANIVER2	54472.5	62988.1	63969.4
Q4KLG1	Q4KLG1	Q4KLG1_RAT	Mospd3	Motile sperm domain containing 3	1	HVAPIPSHYDVQDR	HVAPIPSHYDVQDR	3	HVAPIPSHYDVQDR3	5889.68		8093.48
A0A8I5ZL52	A0A8I5ZL52	A0A8I5ZL52_RAT	RGD1309104	Similar to RIKEN cDNA 1700025G04 gene	1	HVATVQNEEEAQK	HVATVQNEEEAQK	2	HVATVQNEEEAQK2	1426.38		1526.02
A0A8I5ZL52	A0A8I5ZL52	A0A8I5ZL52_RAT	RGD1309104	Similar to RIKEN cDNA 1700025G04 gene	1	HVATVQNEEEAQK	HVATVQNEEEAQK	3	HVATVQNEEEAQK3	2755.72		
A0A8I5ZL52	A0A8I5ZL52	A0A8I5ZL52_RAT	RGD1309104	Similar to RIKEN cDNA 1700025G04 gene	1	HVATVQNEEEAQKGK	HVATVQNEEEAQKGK	3	HVATVQNEEEAQKGK3			1504.91
Q2PQA9	P56536;Q2PQA9;Q6QLM7	KINH_RAT	Kif5b	Kinesin-1 heavy chain	0	HVAVTNMNEHSSR	HVAVTNMNEHSSR	2	HVAVTNMNEHSSR2	49300.6		13837.6
Q2PQA9	P56536;Q2PQA9;Q6QLM7	KINH_RAT	Kif5b	Kinesin-1 heavy chain	0	HVAVTNMNEHSSR	HVAVTNMNEHSSR	3	HVAVTNMNEHSSR3	67024.6		38698.7
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	HVAYGGYSTPEDR	HVAYGGYSTPEDR	3	HVAYGGYSTPEDR3	15305.6	10777	8361.35
A0A0G2JUF2	A0A0G2JUF2	A0A0G2JUF2_RAT	Snx30	Sorting nexin family member 30	1	HVCTMETYITYR	HVC(UniMod:4)TMETYITYR	2	HVC(UniMod:4)TMETYITYR2	1603.39		
D3ZYS7	D3ZYS7	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	1	HVDAHATLNDGVVVQVMGLLSNNNQALR	HVDAHATLNDGVVVQVMGLLSNNNQALR	4	HVDAHATLNDGVVVQVMGLLSNNNQALR4	53645.8	46625.3	29453
F7F5P9	F7F5P9	F7F5P9_RAT	G3bp2	G3BP stress granule assembly factor 2	1	HVDAHATLSDGVVVQVMGLLSNSGQPER	HVDAHATLSDGVVVQVMGLLSNSGQPER	3	HVDAHATLSDGVVVQVMGLLSNSGQPER3	19265.5	6931.43	
F7F5P9	F7F5P9	F7F5P9_RAT	G3bp2	G3BP stress granule assembly factor 2	1	HVDAHATLSDGVVVQVMGLLSNSGQPER	HVDAHATLSDGVVVQVMGLLSNSGQPER	4	HVDAHATLSDGVVVQVMGLLSNSGQPER4	11707.9	15353.4	17457.2
F7F5P9	F7F5P9	F7F5P9_RAT	G3bp2	G3BP stress granule assembly factor 2	1	HVDAHATLSDGVVVQVMGLLSNSGQPERK	HVDAHATLSDGVVVQVMGLLSNSGQPERK	4	HVDAHATLSDGVVVQVMGLLSNSGQPERK4	8522.98	11117.5	10798.3
A0A0G2K4S7	A0A0G2K4S7	A0A0G2K4S7_RAT	Usp45	Ubiquitin carboxyl-terminal hydrolase	1	HVDFPLTLDLAPFCAATCK	HVDFPLTLDLAPFC(UniMod:4)AATC(UniMod:4)K	3	HVDFPLTLDLAPFC(UniMod:4)AATC(UniMod:4)K3	6238.87		10363.2
Q9EQV9	Q9EQV9	CBPB2_RAT	Cpb2	Carboxypeptidase B2	1	HVDFYIMPVMNVDGYDYTWK	HVDFYIMPVMNVDGYDYTWK	3	HVDFYIMPVMNVDGYDYTWK3	22687	23768.4	12486.9
A0A8I5ZMX5	D3ZGN0;A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	0	HVDHFGFICR	HVDHFGFIC(UniMod:4)R	3	HVDHFGFIC(UniMod:4)R3	40246.3	41297.4	41688.3
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	HVDLGGGLKPPGYYVQR	HVDLGGGLKPPGYYVQR	3	HVDLGGGLKPPGYYVQR3	35544	30317.6	25088
Q505J9	Q505J9	ATAD1_RAT	Atad1	Outer mitochondrial transmembrane helix translocase	1	HVDLLEVAQETDGFSGSDLK	HVDLLEVAQETDGFSGSDLK	3	HVDLLEVAQETDGFSGSDLK3	17954.8	17407.5	23947.6
Q9ES54	Q9ES54	NPL4_RAT	Nploc4	Nuclear protein localization protein 4 homolog	1	HVDNIMFENHTVADR	HVDNIMFENHTVADR	3	HVDNIMFENHTVADR3	7046.48	5409.21	9360.38
A0A8I6GKH8	A0A8I6GKH8	A0A8I6GKH8_RAT	Map7	Microtubule-associated protein 7	1	HVDPVISK	HVDPVISK	2	HVDPVISK2	3606.46	8435.56	3258.88
Q05030	Q05030	PGFRB_RAT	Pdgfrb	Platelet-derived growth factor receptor beta	1	HVDQPLSVR	HVDQPLSVR	2	HVDQPLSVR2	5906.71	8885.3	5428.64
P16446	P16446	PIPNA_RAT	Pitpna	Phosphatidylinositol transfer protein alpha isoform	1	HVEAIYIDIADR	HVEAIYIDIADR	2	HVEAIYIDIADR2	5455.28	2226.33	2523.15
P16446	P16446	PIPNA_RAT	Pitpna	Phosphatidylinositol transfer protein alpha isoform	1	HVEAIYIDIADR	HVEAIYIDIADR	3	HVEAIYIDIADR3	14727.4	12031.1	19138.1
D3Z9Y3	D3Z9Y3	D3Z9Y3_RAT	Cerk	Ceramide kinase	1	HVEDDDNDLKELEK	HVEDDDNDLKELEK	3	HVEDDDNDLKELEK3	1901.48	3139.11	2671.08
A0A0G2K1D2	A0A0G2K1D2	A0A0G2K1D2_RAT	Rap1gds1	Rap1 GTPase-GDP dissociation stimulator 1	1	HVEDGNVTVQHAALSALR	HVEDGNVTVQHAALSALR	3	HVEDGNVTVQHAALSALR3	9369.12		
A0A0G2K1D2	A0A0G2K1D2	A0A0G2K1D2_RAT	Rap1gds1	Rap1 GTPase-GDP dissociation stimulator 1	1	HVEDGNVTVQHAALSALR	HVEDGNVTVQHAALSALR	4	HVEDGNVTVQHAALSALR4	2219.43		4065.05
A0A0G2K598	A0A0G2K598	A0A0G2K598_RAT	Tacc2	Transforming, acidic coiled-coil containing protein 2	1	HVEFLGGCHPSK	HVEFLGGC(UniMod:4)HPSK	3	HVEFLGGC(UniMod:4)HPSK3		3431.34	3771.76
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	HVEIFELLKPPCGGLGFSVVGLR	HVEIFELLKPPC(UniMod:4)GGLGFSVVGLR	3	HVEIFELLKPPC(UniMod:4)GGLGFSVVGLR3	1954.31	3335.21	5042.93
A0A8I6B5X8	A0A8I6B5X8	A0A8I6B5X8_RAT	Cmc1	COX assembly mitochondrial protein	1	HVEKDVLIPK	HVEKDVLIPK	3	HVEKDVLIPK3	1257.06		
Q5XIP9	Q5XIP9	TMM43_RAT	Tmem43	Transmembrane protein 43	1	HVEMYQWVETEESNEYTEDGQVK	HVEMYQWVETEESNEYTEDGQVK	3	HVEMYQWVETEESNEYTEDGQVK3	7757.2	5545.24	7786.95
Q5BQE6	Q5BQE6	DHC24_RAT	Dhcr24	Delta(24)-sterol reductase	1	HVENYLK	HVENYLK	2	HVENYLK2	22339.7	22137.9	19136.6
O35952	O35952	GLO2_RAT	Hagh	Hydroxyacylglutathione hydrolase, mitochondrial	1	HVEPGNTAVQEK	HVEPGNTAVQEK	2	HVEPGNTAVQEK2	7803.51	3107.66	6074.12
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	HVEQFCTR	HVEQFC(UniMod:4)TR	2	HVEQFC(UniMod:4)TR2		3819.59	
O88902	O88902	PTN23_RAT	Ptpn23	Tyrosine-protein phosphatase non-receptor type 23 (Fragment)	1	HVEQVLQR	HVEQVLQR	2	HVEQVLQR2	11269.2	10531.5	8533.62
Q6TMG5	Q6TMG5	NEMO_RAT	Ikbkg	NF-kappa-B essential modulator	1	HVETSQPPLLPAPAHHSFHLALSNQR	HVETSQPPLLPAPAHHSFHLALSNQR	4	HVETSQPPLLPAPAHHSFHLALSNQR4	2516.59	7317.49	
Q5I0C3	Q5I0C3	MCCA_RAT	Mccc1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	1	HVEVQVFGDHHGNAVYLFER	HVEVQVFGDHHGNAVYLFER	4	HVEVQVFGDHHGNAVYLFER4	14678.2	20031.4	17858.2
A1KQY6	A1KQY6	A1KQY6_RAT	St8sia4	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	1	HVEWVNALILK	HVEWVNALILK	2	HVEWVNALILK2		18935.8	12169.1
A1KQY6	A1KQY6	A1KQY6_RAT	St8sia4	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	1	HVEWVNALILK	HVEWVNALILK	3	HVEWVNALILK3	26147.7	30451.2	28848.7
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	HVFAIFNTEQR	HVFAIFNTEQR	2	HVFAIFNTEQR2	47296	39029.9	34748.5
Q08877	Q08877	DYN3_RAT	Dnm3	Dynamin-3	1	HVFALFNTEQR	HVFALFNTEQR	3	HVFALFNTEQR3	66060.8	60350.8	70516.1
Q6AYJ8	Q6AYJ8	TP8L2_RAT	Tnfaip8l2	Tumor necrosis factor alpha-induced protein 8-like protein 2	1	HVFDHYSDPDLLTALYGPDFTQHLDK	HVFDHYSDPDLLTALYGPDFTQHLDK	4	HVFDHYSDPDLLTALYGPDFTQHLDK4	38233.7	39090.3	26732.3
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	HVFFVDDFDAFK	HVFFVDDFDAFK	3	HVFFVDDFDAFK3	1927.32	1410.7	6837.92
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	HVFFVDDFDAFKK	HVFFVDDFDAFKK	3	HVFFVDDFDAFKK3	33072.2	33518.9	26660
A0A0G2JWU1	A0A0G2JWU1	A0A0G2JWU1_RAT	LOC500959	Triosephosphate isomerase	1	HVFGESDELIGQK	HVFGESDELIGQK	2	HVFGESDELIGQK2	6045.8		
A0A0G2JWU1	A0A0G2JWU1	A0A0G2JWU1_RAT	LOC500959	Triosephosphate isomerase	1	HVFGESDELIGQK	HVFGESDELIGQK	3	HVFGESDELIGQK3	9458.15	2945.11	2143.75
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	HVFGQAVK	HVFGQAVK	1	HVFGQAVK1	24184.8	23248.9	15047.3
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	HVFGQAVK	HVFGQAVK	2	HVFGQAVK2	880282	908489	883130
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	HVFGQPAK	HVFGQPAK	1	HVFGQPAK1	30218.6	23697.3	14213.4
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	HVFGQPAK	HVFGQPAK	2	HVFGQPAK2	989152	841831	831925
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	HVFGQPVK	HVFGQPVK	1	HVFGQPVK1	20170.8	19155.8	13402.5
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	HVFGQPVK	HVFGQPVK	2	HVFGQPVK2	819502	921620	822241
Q7TT47	Q7TT47	SPG7_RAT	Spg7	Paraplegin	1	HVFIDLPTLQER	HVFIDLPTLQER	3	HVFIDLPTLQER3	6091.87	7738.72	4756.71
B1WC06	B1WC06	B1WC06_RAT	Mon1a	Vacuolar fusion protein MON1 homolog	1	HVFVLSEAGKPVYSR	HVFVLSEAGKPVYSR	3	HVFVLSEAGKPVYSR3	11588.6	6954.71	8552.45
P07632	P07632	SODC_RAT	Sod1	Superoxide dismutase [Cu-Zn]	1	HVGDLGNVAAGK	HVGDLGNVAAGK	2	HVGDLGNVAAGK2	18641.7	13692.9	10138.7
D4AB17	D4AB17	D4AB17_RAT	Pfas	phosphoribosylformylglycinamidine synthase	1	HVGKEPPEPGMEVVK	HVGKEPPEPGMEVVK	3	HVGKEPPEPGMEVVK3	3439.7		4897.51
P18422	P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	1	HVGMAVAGLLADAR	HVGMAVAGLLADAR	2	HVGMAVAGLLADAR2	282144	228411	245066
P18422	P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	1	HVGMAVAGLLADAR	HVGMAVAGLLADAR	3	HVGMAVAGLLADAR3	3.16101e+06	3.27831e+06	3.65759e+06
P29117	P29117	PPIF_RAT	Ppif	Peptidyl-prolyl cis-trans isomerase F, mitochondrial	1	HVGPGVLSMANAGPNTNGSQFFICTIK	HVGPGVLSMANAGPNTNGSQFFIC(UniMod:4)TIK	3	HVGPGVLSMANAGPNTNGSQFFIC(UniMod:4)TIK3	45882.3	36120.2	48059.6
P29117	P29117	PPIF_RAT	Ppif	Peptidyl-prolyl cis-trans isomerase F, mitochondrial	1	HVGPGVLSMANAGPNTNGSQFFICTIK	HVGPGVLSMANAGPNTNGSQFFIC(UniMod:4)TIK	4	HVGPGVLSMANAGPNTNGSQFFIC(UniMod:4)TIK4	7871.91	7678.39	5081.02
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	HVGSNLCLDSR	HVGSNLC(UniMod:4)LDSR	2	HVGSNLC(UniMod:4)LDSR2	104102	80116.9	76007.2
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	HVGSNLCLDSR	HVGSNLC(UniMod:4)LDSR	3	HVGSNLC(UniMod:4)LDSR3	102041	86921.9	115260
Q68FT3	Q68FT3	PYRD2_RAT	Pyroxd2	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2	1	HVIGGAAVTEEIIPGFK	HVIGGAAVTEEIIPGFK	3	HVIGGAAVTEEIIPGFK3	23238.6	24786.8	16153
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	HVILGTQQFKPNEFASQINLSVENAWGILR	HVILGTQQFKPNEFASQINLSVENAWGILR	4	HVILGTQQFKPNEFASQINLSVENAWGILR4	13026.9	15832.3	14713.7
A0A8I6ASZ5	A0A8I6ASZ5	A0A8I6ASZ5_RAT	Tcf25	Transcription factor 25	1	HVILSEIK	HVILSEIK	2	HVILSEIK2	9878.88	9837.23	6777.05
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	HVILSGSTEVISNEGGR	HVILSGSTEVISNEGGR	3	HVILSGSTEVISNEGGR3	4746.28		3363.13
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	HVINFDLPSDIEEYVHR	HVINFDLPSDIEEYVHR	3	HVINFDLPSDIEEYVHR3	77687.3	45982.2	41002.4
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	HVINFDLPSDIEEYVHR	HVINFDLPSDIEEYVHR	4	HVINFDLPSDIEEYVHR4	13199.3	12440.4	10167.3
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	HVINMCLNVIK	HVINMC(UniMod:4)LNVIK	2	HVINMC(UniMod:4)LNVIK2	5305.43	3487.6	
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	HVINMCLNVIK	HVINMC(UniMod:4)LNVIK	3	HVINMC(UniMod:4)LNVIK3	18943.7	10550.7	5577.14
Q63598	Q63598	PLST_RAT	Pls3	Plastin-3	1	HVIPMNPNTDDLFK	HVIPMNPNTDDLFK	2	HVIPMNPNTDDLFK2	10797.6	6508.12	6446.78
Q63598	Q63598	PLST_RAT	Pls3	Plastin-3	1	HVIPMNPNTDDLFK	HVIPMNPNTDDLFK	3	HVIPMNPNTDDLFK3	17456.3	18704.2	13100.5
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	HVIPMNPNTDDLFNAVGDGIVLCK	HVIPMNPNTDDLFNAVGDGIVLC(UniMod:4)K	3	HVIPMNPNTDDLFNAVGDGIVLC(UniMod:4)K3	14817.8	10647.7	9575.52
A0A0G2JUS5	A0A0G2JUS5	A0A0G2JUS5_RAT	Dolpp1	Dolichyldiphosphatase	1	HVIQEPR	HVIQEPR	2	HVIQEPR2	18502.9	14029.1	
P19511	P19511	AT5F1_RAT	Atp5pb	ATP synthase F(0) complex subunit B1, mitochondrial	1	HVIQSISAQQEK	HVIQSISAQQEK	2	HVIQSISAQQEK2	102526	86117.3	88189.3
P19511	P19511	AT5F1_RAT	Atp5pb	ATP synthase F(0) complex subunit B1, mitochondrial	1	HVIQSISAQQEK	HVIQSISAQQEK	3	HVIQSISAQQEK3	421018	418397	457597
P19511	P19511	AT5F1_RAT	Atp5pb	ATP synthase F(0) complex subunit B1, mitochondrial	1	HVIQSISAQQEKETIAK	HVIQSISAQQEKETIAK	3	HVIQSISAQQEKETIAK3	44715.6	35544	64225.6
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	HVIQTLSQEFALSQHPHSR	HVIQTLSQEFALSQHPHSR	3	HVIQTLSQEFALSQHPHSR3	6306.57		
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	HVIQTLSQEFALSQHPHSR	HVIQTLSQEFALSQHPHSR	4	HVIQTLSQEFALSQHPHSR4	36343.2	34964.8	25141.8
Q7TQ16	Q7TQ16	QCR8_RAT	Uqcrq	Cytochrome b-c1 complex subunit 8	1	HVISYSLSPFEQR	HVISYSLSPFEQR	2	HVISYSLSPFEQR2	66911.8	65236.4	78942.2
Q7TQ16	Q7TQ16	QCR8_RAT	Uqcrq	Cytochrome b-c1 complex subunit 8	1	HVISYSLSPFEQR	HVISYSLSPFEQR	3	HVISYSLSPFEQR3	279713	223730	316265
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	HVITELFTTQK	HVITELFTTQK	2	HVITELFTTQK2	69542	58369.3	61128.6
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	HVITELFTTQK	HVITELFTTQK	3	HVITELFTTQK3	141503	167565	166746
Q05754	Q05754	DOPO_RAT	Dbh	Dopamine beta-hydroxylase	1	HVLAAWALGAK	HVLAAWALGAK	2	HVLAAWALGAK2		7465.96	5438.19
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	HVLDTLIQLAK	HVLDTLIQLAK	2	HVLDTLIQLAK2	24560.5	16611.7	26111.2
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	HVLDTLIQLAK	HVLDTLIQLAK	3	HVLDTLIQLAK3	8861.93	11715	9101.82
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	HVLEDSPAGK	HVLEDSPAGK	2	HVLEDSPAGK2	19655.8	11113.2	10310.7
B0K015	B0K015	B0K015_RAT	Commd8	COMM domain containing 8	1	HVLEDVTTFFK	HVLEDVTTFFK	2	HVLEDVTTFFK2	1358.51		1977.79
B0K015	B0K015	B0K015_RAT	Commd8	COMM domain containing 8	1	HVLEDVTTFFK	HVLEDVTTFFK	3	HVLEDVTTFFK3	3275.96	2470.58	2286.19
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	HVLEGHDR	HVLEGHDR	2	HVLEGHDR2			141920
A0A096MJ11	A0A096MJ11	A0A096MJ11_RAT	Gsdmd	Gasdermin D	1	HVLEQSTPWQEQR	HVLEQSTPWQEQR	2	HVLEQSTPWQEQR2	4009.79	5734.64	5791.45
A0A096MJ11	A0A096MJ11	A0A096MJ11_RAT	Gsdmd	Gasdermin D	1	HVLEQSTPWQEQR	HVLEQSTPWQEQR	3	HVLEQSTPWQEQR3	12729.9	11123.6	14754.4
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	HVLFPLK	HVLFPLK	2	HVLFPLK2	15746.2	7625.48	13677.1
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	HVLGSVDYDGINDAITR	HVLGSVDYDGINDAITR	3	HVLGSVDYDGINDAITR3	16643.4	17721.8	12897.5
Q62651	Q62651	ECH1_RAT	Ech1	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial	1	HVLHVQLNRPEK	HVLHVQLNRPEK	3	HVLHVQLNRPEK3	4430.2	2737.53	
Q9QZL2	Q9QZL2	CHST3_RAT	Chst3	Carbohydrate sulfotransferase 3	1	HVLLMATTR	HVLLMATTR	2	HVLLMATTR2	37739.2	41426.4	33664.4
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	HVLNLLDEIENIK	HVLNLLDEIENIK	2	HVLNLLDEIENIK2	18777	6138.32	3695.9
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	HVLNLLDEIENIK	HVLNLLDEIENIK	3	HVLNLLDEIENIK3	94825.6	58449.1	46971.4
Q9ERE6	Q9ERE6	MPRIP_RAT	Mprip	Myosin phosphatase Rho-interacting protein	1	HVLPTSAPDVTSSLPEGK	HVLPTSAPDVTSSLPEGK	3	HVLPTSAPDVTSSLPEGK3		5506.99	3459.26
P31652	P31652	SC6A4_RAT	Slc6a4	Sodium-dependent serotonin transporter	1	HVLQIHQSK	HVLQIHQSK	2	HVLQIHQSK2	26777.6	17641.1	24404.1
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	HVLQQFADNDVSR	HVLQQFADNDVSR	2	HVLQQFADNDVSR2	13776.3	24409.8	8784.15
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	HVLQQFADNDVSR	HVLQQFADNDVSR	3	HVLQQFADNDVSR3	65507.7	91132.4	90726
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	HVLQSASAGSGSFTDVR	HVLQSASAGSGSFTDVR	2	HVLQSASAGSGSFTDVR2	6.18236e+06	5.85321e+06	5.41123e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	HVLQSASAGSGSFTDVR	HVLQSASAGSGSFTDVR	3	HVLQSASAGSGSFTDVR3	447092	522406	462679
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	HVLQSASAGSGSFTDVR	HVLQSASAGSGSFTDVR	4	HVLQSASAGSGSFTDVR4	2672.14	1426.35	1968.27
P01830	P01830	THY1_RAT	Thy1	Thy-1 membrane glycoprotein	1	HVLSGTLGVPEHTYR	HVLSGTLGVPEHTYR	2	HVLSGTLGVPEHTYR2	3590.63	1525.72	4699.16
P01830	P01830	THY1_RAT	Thy1	Thy-1 membrane glycoprotein	1	HVLSGTLGVPEHTYR	HVLSGTLGVPEHTYR	3	HVLSGTLGVPEHTYR3	365128	402486	400939
P01830	P01830	THY1_RAT	Thy1	Thy-1 membrane glycoprotein	1	HVLSGTLGVPEHTYR	HVLSGTLGVPEHTYR	4	HVLSGTLGVPEHTYR4	69670.3	88049.8	97695.2
D4AA91	D4AA91	D4AA91_RAT	Cers5	Ceramide synthase 5	1	HVLSVFPLAAGLFSVR	HVLSVFPLAAGLFSVR	3	HVLSVFPLAAGLFSVR3	1700.03	1686.99	
Q6AY61	Q6AY61	PRS23_RAT	Prss23	Serine protease 23	1	HVLTAAHCIHDGK	HVLTAAHC(UniMod:4)IHDGK	3	HVLTAAHC(UniMod:4)IHDGK3	8545.47	3339.59	
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	HVLTGSADNSCR	HVLTGSADNSC(UniMod:4)R	2	HVLTGSADNSC(UniMod:4)R2	31595.8		99235.2
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	HVLTGSADNSCR	HVLTGSADNSC(UniMod:4)R	3	HVLTGSADNSC(UniMod:4)R3	25129.8		45273.6
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	HVLTLTDQVTR	HVLTLTDQVTR	2	HVLTLTDQVTR2	3.19836e+06	3.13331e+06	2.90299e+06
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	HVLTLTDQVTR	HVLTLTDQVTR	3	HVLTLTDQVTR3	1.35147e+06	1.5659e+06	1.56231e+06
P62815	P62815;D3ZZS8	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	0	HVLVILTDMSSYAEALR	HVLVILTDMSSYAEALR	2	HVLVILTDMSSYAEALR2	3185.18		
P62815	P62815;D3ZZS8	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	0	HVLVILTDMSSYAEALR	HVLVILTDMSSYAEALR	3	HVLVILTDMSSYAEALR3	7926.95	3364.88	5309.34
Q64119	Q64119	MYL6_RAT	Myl6	Myosin light polypeptide 6	1	HVLVTLGEK	HVLVTLGEK	2	HVLVTLGEK2	60923.4	59078.7	74434.9
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	HVMDGSLPTSLK	HVMDGSLPTSLK	2	HVMDGSLPTSLK2	13403.5	18724.1	11543.3
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	HVMDGSLPTSLK	HVMDGSLPTSLK	3	HVMDGSLPTSLK3	47397.9	41578.6	52603.6
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	HVMDVVDEELSK	HVMDVVDEELSK	2	HVMDVVDEELSK2	25026.1	28802.8	17914
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	HVMDVVDEELSK	HVMDVVDEELSK	3	HVMDVVDEELSK3	27123	33041.4	37780.1
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	HVMNELLDTER	HVMNELLDTER	2	HVMNELLDTER2	5227.87	2795.19	
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	HVMNELLDTER	HVMNELLDTER	3	HVMNELLDTER3	7517.87	6228.11	4947.53
P0DP29;P0DP30;P0DP31	P0DP30;P0DP29;P0DP31	CALM1_RAT;CALM2_RAT;CALM3_RAT	Calm1;Calm2;Calm3	Calmodulin-1	0	HVMTNLGEK	HVMTNLGEK	2	HVMTNLGEK2	59225	58262.8	61651.4
Q6P9U8	Q6P9U8	EIF3H_RAT	Eif3h	Eukaryotic translation initiation factor 3 subunit H	1	HVNIDHLHVGWYQSTYYGSFVTR	HVNIDHLHVGWYQSTYYGSFVTR	4	HVNIDHLHVGWYQSTYYGSFVTR4	30246.4	27278.7	34034.8
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	HVNQCIVISGESGSGK	HVNQC(UniMod:4)IVISGESGSGK	2	HVNQC(UniMod:4)IVISGESGSGK2	3125.08	1393.81	
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	HVNQCIVISGESGSGK	HVNQC(UniMod:4)IVISGESGSGK	3	HVNQC(UniMod:4)IVISGESGSGK3	20336.9	13390.3	25994.1
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	HVPCVEDEDFIQALDK	HVPC(UniMod:4)VEDEDFIQALDK	3	HVPC(UniMod:4)VEDEDFIQALDK3	17140.9	17520	6246.23
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	HVPDDFWPPQPK	HVPDDFWPPQPK	2	HVPDDFWPPQPK2	57888.5	67217.9	56418.5
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	HVPDDFWPPQPK	HVPDDFWPPQPK	3	HVPDDFWPPQPK3	123589	138254	118771
P24329	P24329	THTR_RAT	Tst	Thiosulfate sulfurtransferase	1	HVPGASFFDIEECR	HVPGASFFDIEEC(UniMod:4)R	3	HVPGASFFDIEEC(UniMod:4)R3	5762.76	2628.6	1928.4
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	HVPTAHPPHHCAVCMQFVR	HVPTAHPPHHC(UniMod:4)AVC(UniMod:4)MQFVR	4	HVPTAHPPHHC(UniMod:4)AVC(UniMod:4)MQFVR4	10538.8	7638.68	7763.19
D3ZDE4	D3ZDE4	D3ZDE4_RAT	Dguok	Deoxyguanosine kinase	1	HVPVLVLNISEDFSENAAK	HVPVLVLNISEDFSENAAK	3	HVPVLVLNISEDFSENAAK3	6105.38	1584.98	
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	HVPVVYVDYPGPASLTQIYGTFNR	HVPVVYVDYPGPASLTQIYGTFNR	3	HVPVVYVDYPGPASLTQIYGTFNR3	36869.2	60606.1	44135.6
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	HVQAAVLHVDQTA	HVQAAVLHVDQTA	2	HVQAAVLHVDQTA2	277710	262671	251875
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	HVQAAVLHVDQTA	HVQAAVLHVDQTA	3	HVQAAVLHVDQTA3	53818.9	61780.1	1.92474e+06
Q9EP80	Q9EP80	PICK1_RAT	Pick1	PRKCA-binding protein	1	HVQDIVFQLQR	HVQDIVFQLQR	3	HVQDIVFQLQR3	8563.86	7715.68	8916.51
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	HVQEALAQLLK	HVQEALAQLLK	2	HVQEALAQLLK2	171498	161385	166416
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	HVQEALAQLLK	HVQEALAQLLK	3	HVQEALAQLLK3	482699	420778	490479
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	HVQELAEQLYK	HVQELAEQLYK	2	HVQELAEQLYK2	8138.51		8253.04
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	HVQLLGR	HVQLLGR	2	HVQLLGR2	339572	365777	344441
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	HVQMVLGQLVDENYLDR	HVQMVLGQLVDENYLDR	3	HVQMVLGQLVDENYLDR3	25918.2	28921.8	25532.3
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	HVQPTLDLTEAELR	HVQPTLDLTEAELR	2	HVQPTLDLTEAELR2	17923	27670.3	31339.7
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	HVQPTLDLTEAELR	HVQPTLDLTEAELR	3	HVQPTLDLTEAELR3	148445	145322	143594
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	HVQPTLDLTEAELRK	HVQPTLDLTEAELRK	3	HVQPTLDLTEAELRK3	4587.47	6818.45	5040.7
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	HVQPTLDLTEAELRK	HVQPTLDLTEAELRK	4	HVQPTLDLTEAELRK4	30907.7	32957.4	28686.6
M0R9J2	M0R9J2	M0R9J2_RAT	Pigg	GPI ethanolamine phosphate transferase 2	1	HVQQTDLAATLAIGLGLPIPK	HVQQTDLAATLAIGLGLPIPK	3	HVQQTDLAATLAIGLGLPIPK3	925.195	2415.79	
Q9JJW1	Q9JJW1	TSN2_RAT	Tspan2	Tetraspanin-2	1	HVQSMYEEAYSDYVR	HVQSMYEEAYSDYVR	3	HVQSMYEEAYSDYVR3	7755.87	6550.08	5166.37
Q66HA4	Q66HA4	TAXB1_RAT	Tax1bp1	Tax1-binding protein 1 homolog	1	HVQTHFDQNVLNFD	HVQTHFDQNVLNFD	2	HVQTHFDQNVLNFD2	4970.65	5320.2	7045.11
Q66HA4	Q66HA4	TAXB1_RAT	Tax1bp1	Tax1-binding protein 1 homolog	1	HVQTHFDQNVLNFD	HVQTHFDQNVLNFD	3	HVQTHFDQNVLNFD3	21794.9	32727	28858.2
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	HVSDDMK	HVSDDMK	2	HVSDDMK2			143333
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	HVSEAICNEQHLFLPFSYK	HVSEAIC(UniMod:4)NEQHLFLPFSYK	3	HVSEAIC(UniMod:4)NEQHLFLPFSYK3	136017	233347	208557
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	HVSEAICNEQHLFLPFSYK	HVSEAIC(UniMod:4)NEQHLFLPFSYK	4	HVSEAIC(UniMod:4)NEQHLFLPFSYK4	1.03085e+06	1.13411e+06	1.14399e+06
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	HVSHVGWDPQNGFDVNNLDPDLR	HVSHVGWDPQNGFDVNNLDPDLR	3	HVSHVGWDPQNGFDVNNLDPDLR3	31771.3	42568.7	37177.7
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	HVSHVGWDPQNGFDVNNLDPDLR	HVSHVGWDPQNGFDVNNLDPDLR	4	HVSHVGWDPQNGFDVNNLDPDLR4	134876	134777	122800
B0K034	B0K034	B0K034_RAT	Dtd2	D-aminoacyl-tRNA deacylase	1	HVSILDLPGDILIIPQATLGGR	HVSILDLPGDILIIPQATLGGR	3	HVSILDLPGDILIIPQATLGGR3	11066.1	6009.15	2545.59
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	HVSLMDQR	HVSLMDQR	2	HVSLMDQR2	117055	127139	98147.4
Q9WVR7	Q9WVR7	PPM1F_RAT	Ppm1f	Protein phosphatase 1F	1	HVSLPAFNHLFGLSDSVHR	HVSLPAFNHLFGLSDSVHR	4	HVSLPAFNHLFGLSDSVHR4	7888.95	14584	11679.8
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	HVSPAGAAVGVPLSEDEAR	HVSPAGAAVGVPLSEDEAR	3	HVSPAGAAVGVPLSEDEAR3	39223.8	52187.6	46588.3
F1MA46	F1MA46	F1MA46_RAT	Pcdh12	Protocadherin 12	1	HVSPEVMNTFGIDAK	HVSPEVMNTFGIDAK	2	HVSPEVMNTFGIDAK2	14517.3	16841.8	15196.6
F1MA46	F1MA46	F1MA46_RAT	Pcdh12	Protocadherin 12	1	HVSPEVMNTFGIDAK	HVSPEVMNTFGIDAK	3	HVSPEVMNTFGIDAK3	23221.2	31894.5	28270.8
Q63965	Q63965	SFXN1_RAT	Sfxn1	Sideroflexin-1	1	HVSPLIGR	HVSPLIGR	2	HVSPLIGR2	437427	372119	405182
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	HVSSLLAK	HVSSLLAK	2	HVSSLLAK2	113249	135973	136476
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	HVSSPSASYTLSVPYAR	HVSSPSASYTLSVPYAR	2	HVSSPSASYTLSVPYAR2	655628	743026	662882
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	HVSSPSASYTLSVPYAR	HVSSPSASYTLSVPYAR	3	HVSSPSASYTLSVPYAR3	4.05437e+06	24670.9	4.68313e+06
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	HVSTSSDEGSPSASTPMINK	HVSTSSDEGSPSASTPMINK	3	HVSTSSDEGSPSASTPMINK3	17748.4	20706.6	28940.8
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	HVTAIDR	HVTAIDR	2	HVTAIDR2	72570.4		71024.5
B2RYD7	B2RYD7	B2RYD7_RAT	Stt3b	dolichyl-diphosphooligosaccharide--protein glycotransferase	1	HVTEQEKPEEGLGPNIK	HVTEQEKPEEGLGPNIK	3	HVTEQEKPEEGLGPNIK3	5376.62	7680.57	4273.99
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	HVTFNQVK	HVTFNQVK	2	HVTFNQVK2	50415.9	37727.6	31390.9
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	HVTFVDNAK	HVTFVDNAK	2	HVTFVDNAK2	47431.7	53417	42436.6
D4A5Z0	D4A5Z0	D4A5Z0_RAT	Csgalnact2	Hexosyltransferase	1	HVTLFRPFGPLMK	HVTLFRPFGPLMK	3	HVTLFRPFGPLMK3	3370.88	9030.89	2490.13
P07151	P07151	B2MG_RAT	B2m	Beta-2-microglobulin	1	HVTLKEPK	HVTLKEPK	1	HVTLKEPK1	9532.73	5676.38	8620.78
P07151	P07151	B2MG_RAT	B2m	Beta-2-microglobulin	1	HVTLKEPK	HVTLKEPK	2	HVTLKEPK2	158001	123131	122954
A0A8I5ZQD4	A0A8I5ZQD4	A0A8I5ZQD4_RAT	Dst	Dystonin	1	HVTLPDK	HVTLPDK	2	HVTLPDK2	3696.88		
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	HVTVVGELSR	HVTVVGELSR	2	HVTVVGELSR2	32584.1	37528.6	35155.8
A0A8I6AD67	A0A8I6AD67	A0A8I6AD67_RAT	Parp9	Poly [ADP-ribose] polymerase	1	HVVDAVVNAANEDLLHGGGLAGSLVK	HVVDAVVNAANEDLLHGGGLAGSLVK	4	HVVDAVVNAANEDLLHGGGLAGSLVK4	7202.77	4742.28	7312.51
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	HVVDGISR	HVVDGISR	2	HVVDGISR2	18551.3	19755.4	17382.7
D4A929	D4A929	WDR81_RAT	Wdr81	WD repeat-containing protein 81	1	HVVEVTPCESGWTR	HVVEVTPC(UniMod:4)ESGWTR	3	HVVEVTPC(UniMod:4)ESGWTR3	5899.57	7326.58	7932.41
A0A8I5YC36	A0A8I5YC36	A0A8I5YC36_RAT	Ranbp2	RAN binding protein 2	1	HVVFGFVK	HVVFGFVK	2	HVVFGFVK2	3638.1		
P29117	P29117	PPIF_RAT	Ppif	Peptidyl-prolyl cis-trans isomerase F, mitochondrial	1	HVVFGHVK	HVVFGHVK	1	HVVFGHVK1	1741.02	3010.65	5129.4
P29117	P29117	PPIF_RAT	Ppif	Peptidyl-prolyl cis-trans isomerase F, mitochondrial	1	HVVFGHVK	HVVFGHVK	2	HVVFGHVK2	23652.8	21792.9	28270.4
P62083	P62083;A0A8I6GEL5;Q6AY74;A0A8I6AEL1	RS7_RAT	Rps7	Small ribosomal subunit protein eS7	0	HVVFIAQR	HVVFIAQR	2	HVVFIAQR2	47465.2	32668.5	21136.1
Q64573	Q64573	EST1F_RAT	Ces1f	Liver carboxylesterase 1F	1	HVVGDHADDLYSVFGAPILR	HVVGDHADDLYSVFGAPILR	3	HVVGDHADDLYSVFGAPILR3		2225.5	
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	HVVPNEVVVQR	HVVPNEVVVQR	2	HVVPNEVVVQR2	954393	748897	868878
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	HVVPNEVVVQR	HVVPNEVVVQR	3	HVVPNEVVVQR3	4.84263e+06	4.9256e+06	5.65715e+06
A0A8I6AEI1	A0A8I6AEI1	A0A8I6AEI1_RAT	Hps1	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1	1	HVVQAVNSSPER	HVVQAVNSSPER	2	HVVQAVNSSPER2	7456.92	6510.99	4817.15
A0A8I6AEI1	A0A8I6AEI1	A0A8I6AEI1_RAT	Hps1	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1	1	HVVQAVNSSPER	HVVQAVNSSPER	3	HVVQAVNSSPER3	22756.7	29696.8	14247.3
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	HVVQEEEDVQTAMACLASCPLLK	HVVQEEEDVQTAMAC(UniMod:4)LASC(UniMod:4)PLLK	3	HVVQEEEDVQTAMAC(UniMod:4)LASC(UniMod:4)PLLK3	7365.65	6594.46	4766.65
Q5RKI6	Q5RKI6	EIF1A_RAT	Eif1ad	Probable RNA-binding protein EIF1AD	1	HVVQEVLGEHMVPSDQQQIVK	HVVQEVLGEHMVPSDQQQIVK	3	HVVQEVLGEHMVPSDQQQIVK3	13832.4	14392.9	4071.6
Q5RKI6	Q5RKI6	EIF1A_RAT	Eif1ad	Probable RNA-binding protein EIF1AD	1	HVVQEVLGEHMVPSDQQQIVK	HVVQEVLGEHMVPSDQQQIVK	4	HVVQEVLGEHMVPSDQQQIVK4	16769.3	14904.7	19125.1
A0A8I6ARU6	A0A8I6ARU6	A0A8I6ARU6_RAT	Galk1	Galactokinase 1	1	HVVSEIR	HVVSEIR	2	HVVSEIR2	25860.5		11648.4
Q66HF6	Q66HF6	Q66HF6_RAT	Tinag	Tubulointerstitial nephritis antigen	1	HVVSTNEEPEKYR	HVVSTNEEPEKYR	3	HVVSTNEEPEKYR3	10863.3	10479.5	11427.9
A0A8I5ZTH4	A0A0G2K749;A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	0	HVVSVFK	HVVSVFK	2	HVVSVFK2	56803.1	65707.1	42357.5
D4A5S6	D4A5S6	D4A5S6_RAT	Alg1	ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase	1	HVVVVVLGDVGR	HVVVVVLGDVGR	3	HVVVVVLGDVGR3	6021.91	2373.98	1875.56
Q5M7T1	Q5M7T1	CIAO1_RAT	Ciao1	Probable cytosolic iron-sulfur protein assembly protein CIAO1	1	HVVWHPSQELLASASYDDTVK	HVVWHPSQELLASASYDDTVK	3	HVVWHPSQELLASASYDDTVK3	40186.6	44395.7	35082.1
Q5M7T1	Q5M7T1	CIAO1_RAT	Ciao1	Probable cytosolic iron-sulfur protein assembly protein CIAO1	1	HVVWHPSQELLASASYDDTVK	HVVWHPSQELLASASYDDTVK	4	HVVWHPSQELLASASYDDTVK4	42481.8	55376.7	62672.3
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	HVYGELDLQIR	HVYGELDLQIR	2	HVYGELDLQIR2	87138.6	51152	38913.6
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	HVYGELDLQIR	HVYGELDLQIR	3	HVYGELDLQIR3	171343	126781	105109
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	HVYLDEPIK	HVYLDEPIK	2	HVYLDEPIK2	14707.1	7324.52	7872.27
A0A8I5YCC9	A0A8I5YCC9	A0A8I5YCC9_RAT	Itga5	Integrin subunit alpha 5	1	HVYLGDK	HVYLGDK	2	HVYLGDK2	6614.07		7587.85
Q5EB81	Q5EB81	NB5R1_RAT	Cyb5r1	NADH-cytochrome b5 reductase 1	1	HVYLSAR	HVYLSAR	2	HVYLSAR2	33771.4	33057.3	29609.3
G3V904	G3V904	G3V904_RAT	Pld4	Phospholipase D family, member 4	1	HVYVGSANMDWR	HVYVGSANMDWR	3	HVYVGSANMDWR3		4291.92	
P47861	P47861	SYT5_RAT	Syt5	Synaptotagmin-5	1	HWADMLANPR	HWADMLANPR	2	HWADMLANPR2	18747	14222.5	25584.1
P47861	P47861	SYT5_RAT	Syt5	Synaptotagmin-5	1	HWADMLANPR	HWADMLANPR	3	HWADMLANPR3	19546.8	28375.7	32555.1
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	HWEEILQQSLWER	HWEEILQQSLWER	2	HWEEILQQSLWER2	12995.6	6748.43	8117.49
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	HWEEILQQSLWER	HWEEILQQSLWER	3	HWEEILQQSLWER3	96123.6	80610	88705.5
P16636	P16636	LYOX_RAT	Lox	Protein-lysine 6-oxidase	1	HWFQVGFSPSGAGDGASR	HWFQVGFSPSGAGDGASR	3	HWFQVGFSPSGAGDGASR3	12322.2	10617.5	7630.3
Q9ERE6	Q9ERE6	MPRIP_RAT	Mprip	Myosin phosphatase Rho-interacting protein	1	HWFVLADQSLR	HWFVLADQSLR	3	HWFVLADQSLR3	1356.25	4493.65	7105.71
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	HWFVLTDSSLK	HWFVLTDSSLK	2	HWFVLTDSSLK2	26052.2	31714.6	22892.6
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	HWFVLTDSSLK	HWFVLTDSSLK	3	HWFVLTDSSLK3	2336.19	5942.34	8177.54
Q9EQY6	Q9EQY6	PIGM_RAT	Pigm	GPI mannosyltransferase 1	1	HWGEWFLNLR	HWGEWFLNLR	3	HWGEWFLNLR3	1198.4	2694.14	3672.76
P62425	P62425;F1M4C7;A0A8I6AUG1;M0R3M3;D3ZU22;D4A8X2;A0A8I6AMN7;Q7TQ86;D3ZPL5	RL7A_RAT	Rpl7a	Large ribosomal subunit protein eL8	0	HWGGNVLGPK	HWGGNVLGPK	2	HWGGNVLGPK2	104369	54899.4	51145.7
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	HWGPIYIK	HWGPIYIK	2	HWGPIYIK2	29836.8	14164.8	42857.7
D3ZER2	D3ZER2	BFSP2_RAT	Bfsp2	Phakinin	1	HWHDMELQNLGAVVGR	HWHDMELQNLGAVVGR	3	HWHDMELQNLGAVVGR3		6456.56	9197.14
A0A8I5ZYD8	A0A8I5ZYD8	A0A8I5ZYD8_RAT	Fhl3	Four and a half LIM domains 3	1	HWHHSCFSCAR	HWHHSC(UniMod:4)FSC(UniMod:4)AR	2	HWHHSC(UniMod:4)FSC(UniMod:4)AR2	6329.99	19395.6	6911.93
A0A8I5ZYD8	A0A8I5ZYD8	A0A8I5ZYD8_RAT	Fhl3	Four and a half LIM domains 3	1	HWHHSCFSCAR	HWHHSC(UniMod:4)FSC(UniMod:4)AR	3	HWHHSC(UniMod:4)FSC(UniMod:4)AR3	49305.5	41932.3	
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	HWHSDAPLSCTPLNCGKPPPIQNGFLR	HWHSDAPLSC(UniMod:4)TPLNC(UniMod:4)GKPPPIQNGFLR	4	HWHSDAPLSC(UniMod:4)TPLNC(UniMod:4)GKPPPIQNGFLR4	21635.9	35802.6	19545.8
D3ZV56	D3ZV56	D3ZV56_RAT	Rnf150	Ring finger protein 150	1	HWIALIPK	HWIALIPK	2	HWIALIPK2		2591.37	4070.11
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	HWILPQDYDHAQAEAR	HWILPQDYDHAQAEAR	2	HWILPQDYDHAQAEAR2	5748.35	3301.48	3095.32
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	HWILPQDYDHAQAEAR	HWILPQDYDHAQAEAR	3	HWILPQDYDHAQAEAR3	105403	79297.2	88033.2
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	HWILPQDYDHAQAEAR	HWILPQDYDHAQAEAR	4	HWILPQDYDHAQAEAR4	36429	35601.9	34506.5
Q5XIE1	Q5XIE1	THEM6_RAT	Them6	Protein THEM6	1	HWITYNETSSQLLR	HWITYNETSSQLLR	3	HWITYNETSSQLLR3	11116.2	9128.49	14062.5
Q641X9	Q641X9	RM09_RAT	Mrpl9	Large ribosomal subunit protein bL9m	1	HWLAQQAAK	HWLAQQAAK	2	HWLAQQAAK2	4780.39	4212.38	3602.6
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	HWLPAGCETAIFFPMR	HWLPAGC(UniMod:4)ETAIFFPMR	2	HWLPAGC(UniMod:4)ETAIFFPMR2	158930	149514	154352
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	HWLPAGCETAIFFPMR	HWLPAGC(UniMod:4)ETAIFFPMR	3	HWLPAGC(UniMod:4)ETAIFFPMR3	275568	303228	325280
D3ZCK4	D3ZCK4	D3ZCK4_RAT	Def6	DEF6 guanine nucleotide exchange factor	1	HWNVQMNR	HWNVQMNR	2	HWNVQMNR2	9111.13	6441.59	8356.12
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	HWPFMVVNDAGR	HWPFMVVNDAGR	2	HWPFMVVNDAGR2	115095	116417	97005.4
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	HWPFMVVNDAGR	HWPFMVVNDAGR	3	HWPFMVVNDAGR3	108064	103074	105823
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	HWPFMVVNDAGRPK	HWPFMVVNDAGRPK	2	HWPFMVVNDAGRPK2	46951.4	51781.2	34433.6
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	HWPFMVVNDAGRPK	HWPFMVVNDAGRPK	3	HWPFMVVNDAGRPK3	362623	235814	384958
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	HWPFMVVNDAGRPK	HWPFMVVNDAGRPK	4	HWPFMVVNDAGRPK4	55753.8	73676.4	50684.1
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	HWQDLGYLIIYVTGRPDMQK	HWQDLGYLIIYVTGRPDMQK	4	HWQDLGYLIIYVTGRPDMQK4	7261.52	2625.93	4196.09
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	HWQEEDCTFSIMEK	HWQEEDC(UniMod:4)TFSIMEK	2	HWQEEDC(UniMod:4)TFSIMEK2	2906.18	1671.43	1768.68
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	HWQEEDCTFSIMEK	HWQEEDC(UniMod:4)TFSIMEK	3	HWQEEDC(UniMod:4)TFSIMEK3	39741.8	36585.6	31597.5
Q3T1L5	Q3T1L5	ALG6_RAT	Alg6	Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase	1	HWQEITLNLPVK	HWQEITLNLPVK	3	HWQEITLNLPVK3	722.478	1868.47	1805.35
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	HWQELIQQLTHDR	HWQELIQQLTHDR	3	HWQELIQQLTHDR3	16542.6	14439.8	9626.39
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	HWTHVLQDGK	HWTHVLQDGK	2	HWTHVLQDGK2	25262.6	29910	36189.8
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	HWTHVLQDGK	HWTHVLQDGK	3	HWTHVLQDGK3	1.41493e+06	1.72485e+06	1.09183e+06
P13941	P13941	CO3A1_RAT	Col3a1	Collagen alpha-1(III) chain	1	HWWTDAGAEK	HWWTDAGAEK	2	HWWTDAGAEK2	9727.25	7836.37	12485.2
Q5M8C6	Q5M8C6	FGL1_RAT	Fgl1	Fibrinogen-like protein 1	1	HYADCSEIYNDGFK	HYADC(UniMod:4)SEIYNDGFK	3	HYADC(UniMod:4)SEIYNDGFK3	9553.58	7966.65	8055.66
D3ZYT9	D3ZYT9	D3ZYT9_RAT	Fbxl8	F-box and leucine-rich repeat protein 8	1	HYAETLR	HYAETLR	2	HYAETLR2			1828.18
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	HYAGDVTYSVEGFIDKNR	HYAGDVTYSVEGFIDKNR	3	HYAGDVTYSVEGFIDKNR3	9440.95	10151.3	7908.7
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	HYAHTDCPGHADYVK	HYAHTDC(UniMod:4)PGHADYVK	2	HYAHTDC(UniMod:4)PGHADYVK2	8750.9	7663.63	1097.45
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	HYAHTDCPGHADYVK	HYAHTDC(UniMod:4)PGHADYVK	3	HYAHTDC(UniMod:4)PGHADYVK3	58149.9	34934.3	32855.1
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	HYAHTDCPGHADYVK	HYAHTDC(UniMod:4)PGHADYVK	4	HYAHTDC(UniMod:4)PGHADYVK4	103909	90691.5	60538.2
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	HYALNVPLYTHFTSPIR	HYALNVPLYTHFTSPIR	3	HYALNVPLYTHFTSPIR3	8729.22	13898.9	18796.2
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	HYALNVPLYTHFTSPIR	HYALNVPLYTHFTSPIR	4	HYALNVPLYTHFTSPIR4	10831.7	17709.6	11016.1
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	HYALNVPLYTHFTSPIRR	HYALNVPLYTHFTSPIRR	4	HYALNVPLYTHFTSPIRR4	26382.1	29570.8	18345.2
Q62703	Q62703	RCN2_RAT	Rcn2	Reticulocalbin-2	1	HYAMQEAK	HYAMQEAK	2	HYAMQEAK2	3114.96		20265.6
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	HYASEEIK	HYASEEIK	2	HYASEEIK2		140400	
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	HYASEEIKEK	HYASEEIKEK	2	HYASEEIKEK2	44776.2		101781
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	HYASEEIKEK	HYASEEIKEK	3	HYASEEIKEK3	5696.85		139132
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	HYAVDSIHPK	HYAVDSIHPK	3	HYAVDSIHPK3	21536.3	25469.2	23836.4
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	HYCAIADAK	HYC(UniMod:4)AIADAK	2	HYC(UniMod:4)AIADAK2	72465.3	43981.2	90038.3
Q2LAP6	B0BMX0;Q2LAP6;A0A8I5ZLJ9	TES_RAT	Tes	Testin	0	HYCDSEKPR	HYC(UniMod:4)DSEKPR	2	HYC(UniMod:4)DSEKPR2			8852.79
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	HYCIVANPVSR	HYC(UniMod:4)IVANPVSR	2	HYC(UniMod:4)IVANPVSR2	41457.1	40310.2	41311.2
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	HYCIVANPVSR	HYC(UniMod:4)IVANPVSR	3	HYC(UniMod:4)IVANPVSR3	184390	186333	216459
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	HYCTQLSAK	HYC(UniMod:4)TQLSAK	2	HYC(UniMod:4)TQLSAK2	4713.24	2565.81	5239.73
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	HYCVILDPMGPDGK	HYC(UniMod:4)VILDPMGPDGK	2	HYC(UniMod:4)VILDPMGPDGK2	38492.1	42832.2	38930.8
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	HYCVILDPMGPDGK	HYC(UniMod:4)VILDPMGPDGK	3	HYC(UniMod:4)VILDPMGPDGK3	76535.7	59266.7	68628.4
Q63803	P38406;Q63803	GNAS1_RAT	Gnas	Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas	0	HYCYPHFTCAVDTENIR	HYC(UniMod:4)YPHFTC(UniMod:4)AVDTENIR	3	HYC(UniMod:4)YPHFTC(UniMod:4)AVDTENIR3	13811.6	11427.2	6780.23
Q63803	P38406;Q63803	GNAS1_RAT	Gnas	Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas	0	HYCYPHFTCAVDTENIR	HYC(UniMod:4)YPHFTC(UniMod:4)AVDTENIR	4	HYC(UniMod:4)YPHFTC(UniMod:4)AVDTENIR4	36668.5	38455.5	43650.9
Q63803	P38406;Q63803	GNAS1_RAT	Gnas	Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas	0	HYCYPHFTCAVDTENIRR	HYC(UniMod:4)YPHFTC(UniMod:4)AVDTENIRR	4	HYC(UniMod:4)YPHFTC(UniMod:4)AVDTENIRR4		16711.1	14748.4
D4A540	D4A540	AUGN_RAT	Ecrg4	Augurin	1	HYDEDAAIGPR	HYDEDAAIGPR	3	HYDEDAAIGPR3	2742.73	5489.01	5175.2
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	HYDLLSALSQTSYHDPVMGNK	HYDLLSALSQTSYHDPVMGNK	3	HYDLLSALSQTSYHDPVMGNK3	6390.58	10664.2	
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	HYDLLSALSQTSYHDPVMGNK	HYDLLSALSQTSYHDPVMGNK	4	HYDLLSALSQTSYHDPVMGNK4	12166.8	7411.51	6601.45
F1M471	F1M471	F1M471_RAT	Epm2aip1	EPM2A interacting protein 1	1	HYEAEHEFYER	HYEAEHEFYER	3	HYEAEHEFYER3	3653.68	3215.81	6705.07
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	HYEDGYPGGSDNYGSLSR	HYEDGYPGGSDNYGSLSR	3	HYEDGYPGGSDNYGSLSR3	35059.4	35528.6	24892.9
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	HYEEQMR	HYEEQMR	2	HYEEQMR2			5406.42
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	HYEGLSYNVDSLHQK	HYEGLSYNVDSLHQK	3	HYEGLSYNVDSLHQK3	17419.7	14884.2	26492.4
D3ZCT7	D3ZCT7	D3ZCT7_RAT	Sec23b	Protein transport protein SEC23	1	HYEMLANR	HYEMLANR	2	HYEMLANR2	17050	17977.1	12408.1
Q3ZBA0	Q3ZBA0	TCPR1_RAT	Tecpr1	Tectonin beta-propeller repeat-containing protein 1	1	HYEQAVEQSVWVK	HYEQAVEQSVWVK	3	HYEQAVEQSVWVK3	2085.47	2618.95	1387.09
Q64232	Q64232	TECR_RAT	Tecr	Very-long-chain enoyl-CoA reductase	1	HYEVEIR	HYEVEIR	2	HYEVEIR2	454841	458845	523833
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	HYFIAAVEELWDYGVR	HYFIAAVEELWDYGVR	3	HYFIAAVEELWDYGVR3	54249.6	48878.3	42813.6
P52873	P52873	PYC_RAT	Pc	Pyruvate carboxylase, mitochondrial	1	HYFIEVNSR	HYFIEVNSR	2	HYFIEVNSR2	1973.02		1227.22
P84083	P61206;P84082;P84083;P61751;P84079	ARF5_RAT	Arf5	ADP-ribosylation factor 5	0	HYFQNTQGLIFVVDSNDR	HYFQNTQGLIFVVDSNDR	3	HYFQNTQGLIFVVDSNDR3	26923.1	12974.1	7350.36
P84083	P61206;P84082;P84083;P61751;P84079	ARF5_RAT	Arf5	ADP-ribosylation factor 5	0	HYFQNTQGLIFVVDSNDRER	HYFQNTQGLIFVVDSNDRER	3	HYFQNTQGLIFVVDSNDRER3	121611	144453	140601
P84083	P61206;P84082;P84083;P61751;P84079	ARF5_RAT	Arf5	ADP-ribosylation factor 5	0	HYFQNTQGLIFVVDSNDRER	HYFQNTQGLIFVVDSNDRER	4	HYFQNTQGLIFVVDSNDRER4	102166	103491	101024
Q10473	Q10473	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	1	HYFSLGEIR	HYFSLGEIR	2	HYFSLGEIR2	85340.8	59939.9	47106.3
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	HYGFNEILK	HYGFNEILK	2	HYGFNEILK2	39206.1	43760.4	27391.3
P21670	P21670	PSA4_RAT	Psma4	Proteasome subunit alpha type-4	1	HYGFQLYQSDPSGNYGGWK	HYGFQLYQSDPSGNYGGWK	3	HYGFQLYQSDPSGNYGGWK3	861168	932355	881750
P25113	P16290;P25113	PGAM1_RAT	Pgam1	Phosphoglycerate mutase 1	0	HYGGLTGLNK	HYGGLTGLNK	2	HYGGLTGLNK2	44367.1	28869.7	22886.8
F1LWZ3	F1LWZ3	F1LWZ3_RAT	Rhbdf2	Inactive rhomboid protein	1	HYGLGVVGNWLNR	HYGLGVVGNWLNR	3	HYGLGVVGNWLNR3	6237.42	7485.19	4124.14
P24368	P24368	PPIB_RAT	Ppib	Peptidyl-prolyl cis-trans isomerase B	1	HYGPGWVSMANAGK	HYGPGWVSMANAGK	2	HYGPGWVSMANAGK2	49184.7	47227.7	43821.9
P24368	P24368	PPIB_RAT	Ppib	Peptidyl-prolyl cis-trans isomerase B	1	HYGPGWVSMANAGK	HYGPGWVSMANAGK	3	HYGPGWVSMANAGK3	192076	189077	172493
P00787	P00787	CATB_RAT	Ctsb	Cathepsin B	1	HYGYTSYSVSDSEK	HYGYTSYSVSDSEK	3	HYGYTSYSVSDSEK3	22912.8	19063.7	19994.6
P00787	P00787	CATB_RAT	Ctsb	Cathepsin B	1	HYGYTSYSVSDSEKEIMAEIYK	HYGYTSYSVSDSEKEIMAEIYK	3	HYGYTSYSVSDSEKEIMAEIYK3	4798.24		
P00787	P00787	CATB_RAT	Ctsb	Cathepsin B	1	HYGYTSYSVSDSEKEIMAEIYK	HYGYTSYSVSDSEKEIMAEIYK	4	HYGYTSYSVSDSEKEIMAEIYK4	11717.1	12926.4	10031.1
A0A0U1RRV5	A0A0U1RRV5	A0A0U1RRV5_RAT	Cluh	Clustered mitochondria protein homolog	1	HYILDLLR	HYILDLLR	2	HYILDLLR2	3765.34	5620.64	3520.38
P07808	P07808	NPY_RAT	Npy	Pro-neuropeptide Y	1	HYINLITR	HYINLITR	2	HYINLITR2	265033	316869	296457
B1WC97	B1WC97	KCTD7_RAT	Kctd7	BTB/POZ domain-containing protein KCTD7	1	HYIPTDSEGR	HYIPTDSEGR	2	HYIPTDSEGR2	8163.07	7723.54	7925.71
Q60GF7	Q60GF7	PIGX_RAT	Pigx	Phosphatidylinositol-glycan biosynthesis class X protein	1	HYIPTGLFVDPYELASLR	HYIPTGLFVDPYELASLR	3	HYIPTGLFVDPYELASLR3	9048.34		5761.78
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	HYIQTMQER	HYIQTMQER	2	HYIQTMQER2	47992.1	44844.7	48067.5
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	HYIQTMQER	HYIQTMQER	3	HYIQTMQER3	31270.7	43458.4	37334.5
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	HYISNPR	HYISNPR	2	HYISNPR2	166459		251818
O54783	O54783	CHKB_RAT	Chkb	Choline/ethanolamine kinase	1	HYLAEVQK	HYLAEVQK	2	HYLAEVQK2	5687.97	3646.07	5238.58
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	HYLDFINHYANLFHEK	HYLDFINHYANLFHEK	3	HYLDFINHYANLFHEK3	15625.1	25298.5	17455.7
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	HYLDFINHYANLFHEK	HYLDFINHYANLFHEK	4	HYLDFINHYANLFHEK4	64742.7	89956	71902
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	HYLDMNTVLQGWQK	HYLDMNTVLQGWQK	3	HYLDMNTVLQGWQK3	5826.24	7798.28	
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	HYLDQLNHILGILGSPSQEDLNCIINLK	HYLDQLNHILGILGSPSQEDLNC(UniMod:4)IINLK	4	HYLDQLNHILGILGSPSQEDLNC(UniMod:4)IINLK4	11985.3	11479.2	5740.8
P19511	P19511	AT5F1_RAT	Atp5pb	ATP synthase F(0) complex subunit B1, mitochondrial	1	HYLFDVQR	HYLFDVQR	2	HYLFDVQR2	422716	381227	415725
Q6AY86	Q6AY86	VP26A_RAT	Vps26a	Vacuolar protein sorting-associated protein 26A	1	HYLFYDGESVSGK	HYLFYDGESVSGK	2	HYLFYDGESVSGK2	11262	8234.68	9011.73
Q6AY86	Q6AY86	VP26A_RAT	Vps26a	Vacuolar protein sorting-associated protein 26A	1	HYLFYDGESVSGK	HYLFYDGESVSGK	3	HYLFYDGESVSGK3	30720.7	25070.9	21216.2
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	HYLGHNDDIK	HYLGHNDDIK	3	HYLGHNDDIK3		145567	
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	HYLGHTDCVK	HYLGHTDC(UniMod:4)VK	2	HYLGHTDC(UniMod:4)VK2	6809.26	16054.4	9305.4
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	HYLGHTDCVK	HYLGHTDC(UniMod:4)VK	3	HYLGHTDC(UniMod:4)VK3	31355.3		31597.8
D3ZJD8	D3ZJD8	D3ZJD8_RAT	Clec1b	C-type lectin domain family 1 member B	1	HYLICER	HYLIC(UniMod:4)ER	2	HYLIC(UniMod:4)ER2	1.04292e+06	929408	1.24738e+06
D3ZYT8	D3ZYT8	D3ZYT8_RAT	Pikfyve	1-phosphatidylinositol-3-phosphate 5-kinase	1	HYLMYEHER	HYLMYEHER	3	HYLMYEHER3	2813.23	3895.2	1174.16
Q641X3	Q641X3	HEXA_RAT	Hexa	Beta-hexosaminidase subunit alpha	1	HYLPLSSILNTLDVMAYNK	HYLPLSSILNTLDVMAYNK	3	HYLPLSSILNTLDVMAYNK3	9072.92	4635.73	4441.2
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	HYLSNRPIGSDQK	HYLSNRPIGSDQK	3	HYLSNRPIGSDQK3	55627.2	50793.1	56038.9
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	HYLSPQQLR	HYLSPQQLR	2	HYLSPQQLR2	19295.7	13996.8	14213.4
Q9Z2P5	Q9Z2P5	RIPK3_RAT	Ripk3	Receptor-interacting serine/threonine-protein kinase 3	1	HYLSQYR	HYLSQYR	2	HYLSQYR2	6114.1	8135.89	11261.5
A0A8I6A0F4	A0A8I6A0F4;A0A8I6G8P8	A0A8I6A0F4_RAT	ENSRNOG00000064697	Ig-like domain-containing protein	0	HYLSWYQQR	HYLSWYQQR	2	HYLSWYQQR2	17426.5	12157.6	16331.9
A0A8I6A0F4	A0A8I6A0F4;A0A8I6G8P8	A0A8I6A0F4_RAT	ENSRNOG00000064697	Ig-like domain-containing protein	0	HYLSWYQQR	HYLSWYQQR	3	HYLSWYQQR3	36135.5	39859.8	35575
A0A8I6A0F4	A0A8I6A0F4;A0A8I6G8P8	A0A8I6A0F4_RAT	ENSRNOG00000064697	Ig-like domain-containing protein	0	HYLSWYQQRPGQTTK	HYLSWYQQRPGQTTK	2	HYLSWYQQRPGQTTK2		2006.3	3325.5
A0A8I6A0F4	A0A8I6A0F4;A0A8I6G8P8	A0A8I6A0F4_RAT	ENSRNOG00000064697	Ig-like domain-containing protein	0	HYLSWYQQRPGQTTK	HYLSWYQQRPGQTTK	3	HYLSWYQQRPGQTTK3	112795	109818	116008
A0A8I6A0F4	A0A8I6A0F4;A0A8I6G8P8	A0A8I6A0F4_RAT	ENSRNOG00000064697	Ig-like domain-containing protein	0	HYLSWYQQRPGQTTK	HYLSWYQQRPGQTTK	4	HYLSWYQQRPGQTTK4	41285.8	41119.7	37856.4
Q5XIM0	Q5XIM0	Q5XIM0_RAT	Bcs1l	Mitochondrial chaperone BCS1	1	HYMITLEVPAR	HYMITLEVPAR	2	HYMITLEVPAR2	5238.09		3382.67
Q5XIM0	Q5XIM0	Q5XIM0_RAT	Bcs1l	Mitochondrial chaperone BCS1	1	HYMITLEVPAR	HYMITLEVPAR	3	HYMITLEVPAR3	4538.77	6925.03	6727.58
Q4V8A2	Q4V8A2	CDC27_RAT	Cdc27	Cell division cycle protein 27 homolog	1	HYNAWYGLGMIYYK	HYNAWYGLGMIYYK	3	HYNAWYGLGMIYYK3	815.317	3410.76	
P63036	P63036	DNJA1_RAT	Dnaja1	DnaJ homolog subfamily A member 1	1	HYNGEAYEDDEHHPR	HYNGEAYEDDEHHPR	3	HYNGEAYEDDEHHPR3			2226.4
G3V7P2	G3V7P2	G3V7P2_RAT	Fgl2	Fibrinogen-like 2	1	HYNHDLR	HYNHDLR	2	HYNHDLR2			1.36544e+06
A0A8I5ZYE2	A0A8I5ZYE2	A0A8I5ZYE2_RAT	ENSRNOG00000065191	Ig-like domain-containing protein	1	HYNPSLK	HYNPSLK	2	HYNPSLK2	100129	98939.5	106682
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	HYPYISTR	HYPYISTR	2	HYPYISTR2	41919		53091.9
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	HYQAGMQAYIDIK	HYQAGMQAYIDIK	2	HYQAGMQAYIDIK2	170441	139126	119566
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	HYQAGMQAYIDIK	HYQAGMQAYIDIK	3	HYQAGMQAYIDIK3	990368	985352	860189
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	HYQAVHDAGNDSGHGGEASLALTR	HYQAVHDAGNDSGHGGEASLALTR	4	HYQAVHDAGNDSGHGGEASLALTR4	14219.4	5164.01	20082.5
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	HYQAVQK	HYQAVQK	2	HYQAVQK2			16147.2
Q6P9U8	Q6P9U8	EIF3H_RAT	Eif3h	Eukaryotic translation initiation factor 3 subunit H	1	HYQEEGQGTEVVQGVLLGLVVEDR	HYQEEGQGTEVVQGVLLGLVVEDR	3	HYQEEGQGTEVVQGVLLGLVVEDR3			11921.9
A0A8I6AD03	A0A8I6AD03	A0A8I6AD03_RAT	Aplp1	Amyloid beta precursor like protein 1	1	HYQHVAAVDPEK	HYQHVAAVDPEK	3	HYQHVAAVDPEK3	75858.2	58295.6	79913.5
P15943	P15943	APLP2_RAT	Aplp2	Amyloid beta precursor like protein 2	1	HYQHVLAVDPEK	HYQHVLAVDPEK	3	HYQHVLAVDPEK3	93127	101783	86353.3
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	HYQINQQWER	HYQINQQWER	2	HYQINQQWER2	15001.9	14515.4	5291.54
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	HYQINQQWER	HYQINQQWER	3	HYQINQQWER3	50643	51275	41497.4
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	HYQINQQWERTYLGNALVCTCYGGSR	HYQINQQWERTYLGNALVC(UniMod:4)TC(UniMod:4)YGGSR	4	HYQINQQWERTYLGNALVC(UniMod:4)TC(UniMod:4)YGGSR4	20706.4	6521.68	20660
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	HYQVLAEENAPENPLR	HYQVLAEENAPENPLR	2	HYQVLAEENAPENPLR2		1862.85	
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	HYQVLAEENAPENPLR	HYQVLAEENAPENPLR	3	HYQVLAEENAPENPLR3	51937	59988.7	51358.1
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	HYSCISELNSK	HYSC(UniMod:4)ISELNSK	2	HYSC(UniMod:4)ISELNSK2	13505	12874.7	4740.35
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	HYSCISELNSK	HYSC(UniMod:4)ISELNSK	3	HYSC(UniMod:4)ISELNSK3	4703.84	5125.14	5584.05
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	HYSDFFQGQR	HYSDFFQGQR	3	HYSDFFQGQR3	33789.6	33189.3	36789.9
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	HYSITLPTVSHSGFLYK	HYSITLPTVSHSGFLYK	2	HYSITLPTVSHSGFLYK2	7306.76	6414.55	1636.02
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	HYSITLPTVSHSGFLYK	HYSITLPTVSHSGFLYK	3	HYSITLPTVSHSGFLYK3	34886.1	55015.5	33623.1
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	HYSITLPTVSHSGFLYK	HYSITLPTVSHSGFLYK	4	HYSITLPTVSHSGFLYK4		8258.68	7558.72
Q9Z244	Q9Z244	GMPR1_RAT	Gmpr	GMP reductase 1	1	HYSLDDWK	HYSLDDWK	2	HYSLDDWK2	64043.8	39303.9	33856.7
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	HYSVTPLGTR	HYSVTPLGTR	2	HYSVTPLGTR2	3497.48	5320.85	6758.86
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	HYTEAIK	HYTEAIK	2	HYTEAIK2	52214.8	42649.3	49539.4
P02767	P02767	TTHY_RAT	Ttr	Transthyretin	1	HYTIAALLSPYSYSTTAVVSNPQN	HYTIAALLSPYSYSTTAVVSNPQN	3	HYTIAALLSPYSYSTTAVVSNPQN3	144510	154953	133223
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	HYTLNSEAPLYVGGMPVDVNSAAFR	HYTLNSEAPLYVGGMPVDVNSAAFR	3	HYTLNSEAPLYVGGMPVDVNSAAFR3	18564.1	18252.2	18261
A0A8J8YPE2	A0A8J8YPE2	A0A8J8YPE2_RAT	Eed	Embryonic ectoderm development	1	HYVGHGNAINELK	HYVGHGNAINELK	3	HYVGHGNAINELK3	13129.6		
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	HYVLVEVK	HYVLVEVK	2	HYVLVEVK2	20805.5	22271.9	19264.1
Q5PQS4	Q5PQS4	GULP1_RAT	Gulp1	PTB domain-containing engulfment adapter protein 1	1	HYVPYNAK	HYVPYNAK	2	HYVPYNAK2	4192.34		
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	HYVVCSTPQSQYYLAEK	HYVVC(UniMod:4)STPQSQYYLAEK	3	HYVVC(UniMod:4)STPQSQYYLAEK3	75750.6	76134.9	60581.6
A0A0G2K6C7	A0A0G2K6C7	A0A0G2K6C7_RAT	Trim5	Tripartite motif-containing 5	1	HYWEVDVSGK	HYWEVDVSGK	2	HYWEVDVSGK2	9967.78	9217.34	7588.36
D3ZYF5	D3ZYF5	D3ZYF5_RAT	Trim58	Tripartite motif-containing 58	1	HYWEVIVGER	HYWEVIVGER	3	HYWEVIVGER3	5169.51	7123.33	9125.51
Q8VHK0	Q8VHK0	ACOT8_RAT	Acot8	Acyl-coenzyme A thioesterase 8	1	HYWVPTSQR	HYWVPTSQR	2	HYWVPTSQR2	34467.2	38783.8	33413.6
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	HYYEVSCHDQGLCR	HYYEVSC(UniMod:4)HDQGLC(UniMod:4)R	3	HYYEVSC(UniMod:4)HDQGLC(UniMod:4)R3	44751.3	22372	17343.9
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	HYYEVSCHDQGLCR	HYYEVSC(UniMod:4)HDQGLC(UniMod:4)R	4	HYYEVSC(UniMod:4)HDQGLC(UniMod:4)R4	11297.6	9390.87	9941.81
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	HYYFLGR	HYYFLGR	2	HYYFLGR2	51424.5	47522.3	25280.8
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	HYYIGITEAVWDYASGSEEK	HYYIGITEAVWDYASGSEEK	3	HYYIGITEAVWDYASGSEEK3	243655	167285	129048
Q4V884	Q4V884	Q4V884_RAT	Cdc16	CDC16 cell division cycle 16 homolog (S. cerevisiae)	1	HYYNCDFK	HYYNC(UniMod:4)DFK	2	HYYNC(UniMod:4)DFK2		7700.15	11032.8
Q4V8E2	Q4V8E2	Q4V8E2_RAT	Psmd14	Proteasome 26S subunit, non-ATPase 14	1	HYYSITINYR	HYYSITINYR	2	HYYSITINYR2	27045.6	16658	12595.4
Q4V8E2	Q4V8E2	Q4V8E2_RAT	Psmd14	Proteasome 26S subunit, non-ATPase 14	1	HYYSITINYR	HYYSITINYR	3	HYYSITINYR3	27298.3	20510.8	17748.9
P62332	P62332	ARF6_RAT	Arf6	ADP-ribosylation factor 6	1	HYYTGTQGLIFVVDCADR	HYYTGTQGLIFVVDC(UniMod:4)ADR	3	HYYTGTQGLIFVVDC(UniMod:4)ADR3	4191.52	2153.3	
P62332	P62332	ARF6_RAT	Arf6	ADP-ribosylation factor 6	1	HYYTGTQGLIFVVDCADRDR	HYYTGTQGLIFVVDC(UniMod:4)ADRDR	3	HYYTGTQGLIFVVDC(UniMod:4)ADRDR3	54578.8	80863.2	42279.5
P62332	P62332	ARF6_RAT	Arf6	ADP-ribosylation factor 6	1	HYYTGTQGLIFVVDCADRDR	HYYTGTQGLIFVVDC(UniMod:4)ADRDR	4	HYYTGTQGLIFVVDC(UniMod:4)ADRDR4	31806.9	31124.5	30523.6
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	IAADITQAVSLSQGLER	IAADITQAVSLSQGLER	2	IAADITQAVSLSQGLER2	3629.67		3144.55
P29419	P29419	ATP5I_RAT	Atp5me	ATP synthase subunit e, mitochondrial	1	IAAEEKK	IAAEEKK	2	IAAEEKK2	2239.18		
D3ZQI6	D3ZQI6	D3ZQI6_RAT	Xpo4	Exportin 4	1	IAAEHCMPLLTSLLEER	IAAEHC(UniMod:4)MPLLTSLLEER	3	IAAEHC(UniMod:4)MPLLTSLLEER3	18664.3	11327.1	19553.5
P58200	P58200	VTI1B_RAT	Vti1b	Vesicle transport through interaction with t-SNAREs homolog 1B	1	IAAETDQIGSEIIEELGEQR	IAAETDQIGSEIIEELGEQR	3	IAAETDQIGSEIIEELGEQR3		9708.28	7612.97
A0A0G2K6J6	A0A0G2K6J6	A0A0G2K6J6_RAT	Ipo8	Importin 8	1	IAAETELNQSYK	IAAETELNQSYK	2	IAAETELNQSYK2	4938.22	1856.16	2112.65
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	IAAFADAAVDPIDFPLAPAYAVPK	IAAFADAAVDPIDFPLAPAYAVPK	3	IAAFADAAVDPIDFPLAPAYAVPK3	106980	88708.1	132605
A0A8I6GK77	A0A8I6GK77	A0A8I6GK77_RAT	Bcas3	BCAS3, microtubule associated cell migration factor	1	IAAFDSCTFTK	IAAFDSC(UniMod:4)TFTK	2	IAAFDSC(UniMod:4)TFTK2	7142.16	2698.18	6830.93
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	IAAFEEGGR	IAAFEEGGR	2	IAAFEEGGR2	142277	156042	136220
P97849	P97849	S27A1_RAT	Slc27a1	Long-chain fatty acid transport protein 1	1	IAAFGHHSYSMR	IAAFGHHSYSMR	3	IAAFGHHSYSMR3	6806.21	3952.43	
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	IAAFTDVGNSLAHVQHLLK	IAAFTDVGNSLAHVQHLLK	3	IAAFTDVGNSLAHVQHLLK3	4677.83	16773.3	17316.7
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	IAAFTDVGNSLAHVQHLLK	IAAFTDVGNSLAHVQHLLK	4	IAAFTDVGNSLAHVQHLLK4	26816.1	19693.8	24029.2
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	IAAHLADFTPR	IAAHLADFTPR	2	IAAHLADFTPR2	2399.87		1783.11
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	IAAHLADFTPR	IAAHLADFTPR	3	IAAHLADFTPR3	31096	29374.6	34576.3
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	IAAHPNVQK	IAAHPNVQK	1	IAAHPNVQK1			1566.35
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	IAAHPNVQK	IAAHPNVQK	2	IAAHPNVQK2	15116.4		6855.66
Q5XIL2	Q5XIL2	P4K2B_RAT	Pi4k2b	Phosphatidylinositol 4-kinase type 2-beta	1	IAAIDNGLAFPFK	IAAIDNGLAFPFK	2	IAAIDNGLAFPFK2		6823.11	7708.34
Q9Z1Z1	Q9Z1Z1	E2AK3_RAT	Eif2ak3	Eukaryotic translation initiation factor 2-alpha kinase 3	1	IAALDAENHGK	IAALDAENHGK	2	IAALDAENHGK2	1873.98	1980.88	1746.32
D3ZYQ7	D3ZYQ7	D3ZYQ7_RAT	Klhl14	Kelch-like family member 14	1	IAALHGLEETKK	IAALHGLEETKK	3	IAALHGLEETKK3	2810.26		
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	IAALQAFADQLIAVDHYAK	IAALQAFADQLIAVDHYAK	3	IAALQAFADQLIAVDHYAK3	262438	285173	340732
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	IAALQCMHALTR	IAALQC(UniMod:4)MHALTR	3	IAALQC(UniMod:4)MHALTR3	9721.13	15915.5	12813.1
Q923S8	Q923S8	PANK4_RAT	Pank4	4'-phosphopantetheine phosphatase	1	IAAMDPIICTALR	IAAMDPIIC(UniMod:4)TALR	2	IAAMDPIIC(UniMod:4)TALR2	8364.19		2395.66
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	IAAPDYIPTVEDILR	IAAPDYIPTVEDILR	2	IAAPDYIPTVEDILR2	119091	135151	126931
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	IAAPDYIPTVEDILR	IAAPDYIPTVEDILR	3	IAAPDYIPTVEDILR3	42883.7	33309.8	51986
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	IAAQDLLLAVATDFQNESAVALATAATR	IAAQDLLLAVATDFQNESAVALATAATR	3	IAAQDLLLAVATDFQNESAVALATAATR3	4160.88		
Q5PQJ6	Q5PQJ6	P5CR3_RAT	Pycr3	Pyrroline-5-carboxylate reductase 3	1	IAAQTLLGTAK	IAAQTLLGTAK	2	IAAQTLLGTAK2	22523	27740.9	28416.3
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	IAATIISFMQVQK	IAATIISFMQVQK	2	IAATIISFMQVQK2	73366.3	64299.9	78290.6
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	IAATIISFMQVQK	IAATIISFMQVQK	3	IAATIISFMQVQK3	7038.71	11302.3	8483.21
P00507	P00507;A0A8I6GJR0	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	0	IAATILTSPDLR	IAATILTSPDLR	2	IAATILTSPDLR2	272667	224927	223116
P00507	P00507;A0A8I6GJR0	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	0	IAATILTSPDLR	IAATILTSPDLR	3	IAATILTSPDLR3	7073.46		7320.41
P00507	P00507;A0A8I6GJR0	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	0	IAATILTSPDLRK	IAATILTSPDLRK	2	IAATILTSPDLRK2	7719.02	9655.29	4287.44
P00507	P00507;A0A8I6GJR0	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	0	IAATILTSPDLRK	IAATILTSPDLRK	3	IAATILTSPDLRK3	132680	193617	157169
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	IAAVATAQQQYDSDTSCHYK	IAAVATAQQQYDSDTSC(UniMod:4)HYK	3	IAAVATAQQQYDSDTSC(UniMod:4)HYK3	12200.4	5469.76	6044.56
Q499S6	Q499S6	Q499S6_RAT	Ctsf	Cathepsin F	1	IAAWLAQK	IAAWLAQK	2	IAAWLAQK2	9757.12	4544.3	10031.3
Q6P791	Q6P791	LTOR1_RAT	Lamtor1	Ragulator complex protein LAMTOR1	1	IAAYAYSALSQIR	IAAYAYSALSQIR	2	IAAYAYSALSQIR2	51477.3	42952.5	61154.4
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	IAAYLFK	IAAYLFK	1	IAAYLFK1	10873.7	14556.9	9461.57
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	IAAYLFK	IAAYLFK	2	IAAYLFK2	1.659e+06	1.80193e+06	1.74632e+06
Q5I0H9	Q5I0H9	PDIA5_RAT	Pdia5	Protein disulfide-isomerase A5	1	IACAAVDCVK	IAC(UniMod:4)AAVDC(UniMod:4)VK	2	IAC(UniMod:4)AAVDC(UniMod:4)VK2	16882	18706.2	19639
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	IACIFGMQLER	IAC(UniMod:4)IFGMQLER	2	IAC(UniMod:4)IFGMQLER2	18212.2	29062	17542.9
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	IACLDFSLQK	IAC(UniMod:4)LDFSLQK	2	IAC(UniMod:4)LDFSLQK2	162427	161119	133443
Q6AY17	Q6AY17	AB17B_RAT	Abhd17b	Alpha/beta hydrolase domain-containing protein 17B	1	IACMFVR	IAC(UniMod:4)MFVR	2	IAC(UniMod:4)MFVR2	55397.5	59069.6	64003.9
Q5XIJ5	Q5XIJ5	AB17A_RAT	Abhd17a	Alpha/beta hydrolase domain-containing protein 17A	1	IACMYVR	IAC(UniMod:4)MYVR	2	IAC(UniMod:4)MYVR2	17116	17563.6	19553.5
A0A096MKD1	A0A096MKD1	A0A096MKD1_RAT	Eef1akmt1	EEF1A lysine methyltransferase 1	1	IACVSAPSVYQK	IAC(UniMod:4)VSAPSVYQK	2	IAC(UniMod:4)VSAPSVYQK2	15656.1	15789.9	11832.7
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	IADALLQLTCISCVR	IADALLQLTC(UniMod:4)ISC(UniMod:4)VR	2	IADALLQLTC(UniMod:4)ISC(UniMod:4)VR2	118854	116204	123047
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	IADALLQLTCISCVR	IADALLQLTC(UniMod:4)ISC(UniMod:4)VR	3	IADALLQLTC(UniMod:4)ISC(UniMod:4)VR3	27430.5	31465.3	26659.6
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	IADEKYNDTFWK	IADEKYNDTFWK	2	IADEKYNDTFWK2	8022.02	8354.74	9464.36
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	IADEKYNDTFWK	IADEKYNDTFWK	3	IADEKYNDTFWK3	165874	236805	253165
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	IADENGKPRPAFSNALEPDFK	IADENGKPRPAFSNALEPDFK	4	IADENGKPRPAFSNALEPDFK4	9881.2	10231.1	23424.2
Q07014	Q62844;Q62726;Q4KM34;F1LSN4;P50545;F1LM93;Q4KM97;Q04589;Q07014;F1LSG7;Q6P6U0;P20793;Q498D6;Q01621	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	0	IADFGLAR	IADFGLAR	2	IADFGLAR2	1.59507e+06	1.78997e+06	1.74012e+06
Q63433	Q63433;O08874	PKN1_RAT	Pkn1	Serine/threonine-protein kinase N1	0	IADFGLCK	IADFGLC(UniMod:4)K	2	IADFGLC(UniMod:4)K2	33313.2	36597.9	35546.8
P54645	Q09137;P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	0	IADFGLSNMMSDGEFLR	IADFGLSNMMSDGEFLR	2	IADFGLSNMMSDGEFLR2	27090.9	24602.5	19188.6
P54645	Q09137;P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	0	IADFGLSNMMSDGEFLR	IADFGLSNMMSDGEFLR	3	IADFGLSNMMSDGEFLR3		4990.34	7602.9
D3ZCD0	B5DFD6;Q62838;D3ZCD0	D3ZCD0_RAT	Tek	receptor protein-tyrosine kinase	0	IADFGLSR	IADFGLSR	2	IADFGLSR2	25084.6	30847.5	34393.1
P05696	P68403;P05696;Q9WTQ0;P09215	KPCA_RAT	Prkca	Protein kinase C alpha type	0	IADFGMCK	IADFGMC(UniMod:4)K	2	IADFGMC(UniMod:4)K2	930372		884107
D4AEG7	D4AEG7	D4AEG7_RAT	Tbc1d13	TBC1 domain family, member 13	1	IADFQDVLKEPSIVLEK	IADFQDVLKEPSIVLEK	3	IADFQDVLKEPSIVLEK3	9772.84	9249.09	15356.9
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	IADGPALTLLVR	IADGPALTLLVR	2	IADGPALTLLVR2	18805.8	20380.3	12022.8
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	IADGYEQAAR	IADGYEQAAR	2	IADGYEQAAR2	585725	579346	587549
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	IADHKLSTFK	IADHKLSTFK	2	IADHKLSTFK2	1696.1	934.375	673.534
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	IADHKLSTFK	IADHKLSTFK	3	IADHKLSTFK3	81067.2	79500	94276.8
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	IADHKLSTFKADVR	IADHKLSTFKADVR	3	IADHKLSTFKADVR3	6876.95	4253.44	21027.7
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	IADHKLSTFKADVR	IADHKLSTFKADVR	4	IADHKLSTFKADVR4	25742.8	60181.6	51976.8
F7EXP7	F7EXP7	F7EXP7_RAT	Snx7	Sorting nexin 7	1	IADHPTLTFNEDFK	IADHPTLTFNEDFK	3	IADHPTLTFNEDFK3		2075.1	1996.56
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	IADISQVYTQNAEMR	IADISQVYTQNAEMR	2	IADISQVYTQNAEMR2	197554	139601	154178
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	IADISQVYTQNAEMR	IADISQVYTQNAEMR	3	IADISQVYTQNAEMR3	36079	39767.4	39498.1
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	IADLEHLK	IADLEHLK	2	IADLEHLK2	13646	11273.9	11947.7
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	IADLENHATR	IADLENHATR	3	IADLENHATR3	19254.8	20030.1	24420.4
D3ZYL0	D3ZYL0	D3ZYL0_RAT	Ripk1	Receptor interacting serine/threonine kinase 1	1	IADLGVASFK	IADLGVASFK	2	IADLGVASFK2	9174.78	8955.77	16046.3
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	IADLPPANPDHIGGYR	IADLPPANPDHIGGYR	3	IADLPPANPDHIGGYR3	58476.4	74203.2	87584
P35565	P35565	CALX_RAT	Canx	Calnexin	1	IADPDAVKPDDWDEDAPSK	IADPDAVKPDDWDEDAPSK	3	IADPDAVKPDDWDEDAPSK3	263416	235442	234199
P21708	A0A8I6GKL7;P21708	MK03_RAT	Mapk3	Mitogen-activated protein kinase 3	0	IADPEHDHTGFLTEYVATR	IADPEHDHTGFLTEYVATR	3	IADPEHDHTGFLTEYVATR3	4416.37	4401.01	3675.03
P21708	A0A8I6GKL7;P21708	MK03_RAT	Mapk3	Mitogen-activated protein kinase 3	0	IADPEHDHTGFLTEYVATR	IADPEHDHTGFLTEYVATR	4	IADPEHDHTGFLTEYVATR4	20486.1	18242.4	13895.4
A0A8I6A282	A0A8I6A282	A0A8I6A282_RAT	Antxr2	Anthrax toxin receptor	1	IADSKDQVFPVK	IADSKDQVFPVK	3	IADSKDQVFPVK3	15617.3	18470.3	18308.3
Q5FVQ9	Q5FVQ9	TBCE_RAT	Tbce	Tubulin-specific chaperone E	1	IAEACPNIR	IAEAC(UniMod:4)PNIR	2	IAEAC(UniMod:4)PNIR2	8342.1	5830.38	5584.81
A0A1W2Q6I2	A0A1W2Q6I2	A0A1W2Q6I2_RAT	Otud6b	ubiquitinyl hydrolase 1	1	IAEAEIENLSGAR	IAEAEIENLSGAR	2	IAEAEIENLSGAR2	7099.84		6545.87
Q7TQ20	Q7TQ20	DNJC2_RAT	Dnajc2	DnaJ homolog subfamily C member 2	1	IAEAVPGR	IAEAVPGR	2	IAEAVPGR2	9839.31	12528.2	7507.03
A0A8I6GLY6	A0A8I6GLY6	A0A8I6GLY6_RAT	Gga1	Golgi associated, gamma adaptin ear containing, ARF binding protein 1	1	IAEAYQMLK	IAEAYQMLK	2	IAEAYQMLK2	9337.36	7282.85	8854.67
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	IAEESNFPFIK	IAEESNFPFIK	2	IAEESNFPFIK2	46117.4	49937.6	45790.3
D4A6K4	D4A6K4	D4A6K4_RAT	Golga1	Golgin A1	1	IAEETAVAQRPGCTPR	IAEETAVAQRPGC(UniMod:4)TPR	3	IAEETAVAQRPGC(UniMod:4)TPR3	10076.1	9134.81	7938.43
Q99NA5	Q99NA5	IDH3A_RAT	Idh3a	Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial	1	IAEFAFEYAR	IAEFAFEYAR	2	IAEFAFEYAR2	132005	122879	133165
B2RYD7	B2RYD7	B2RYD7_RAT	Stt3b	dolichyl-diphosphooligosaccharide--protein glycotransferase	1	IAEGEHPK	IAEGEHPK	2	IAEGEHPK2			25568.8
Q5FVL2	Q5FVL2	EMC8_RAT	Emc8	ER membrane protein complex subunit 8	1	IAEGFSDAALIMVDNAK	IAEGFSDAALIMVDNAK	2	IAEGFSDAALIMVDNAK2	29477.3	27891.3	28231.9
Q5FVL2	Q5FVL2	EMC8_RAT	Emc8	ER membrane protein complex subunit 8	1	IAEGFSDAALIMVDNAK	IAEGFSDAALIMVDNAK	3	IAEGFSDAALIMVDNAK3	9925.26	5548.08	10196.9
Q9Z2M4	Q9Z2M4	DECR2_RAT	Decr2	Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]	1	IAEIFMR	IAEIFMR	2	IAEIFMR2	2594.65	3741.98	2040.15
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	IAEITHLQQQLQESQQMLGR	IAEITHLQQQLQESQQMLGR	3	IAEITHLQQQLQESQQMLGR3	7835.19	5840.4	8341.4
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	IAELCDDPK	IAELC(UniMod:4)DDPK	2	IAELC(UniMod:4)DDPK2	204964	168751	150949
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	IAELCDDPKER	IAELC(UniMod:4)DDPKER	2	IAELC(UniMod:4)DDPKER2	54792.5	33175.4	30259.2
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	IAELCDDPKER	IAELC(UniMod:4)DDPKER	3	IAELC(UniMod:4)DDPKER3	156701	132052	141036
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	IAELCDDPKERDDILR	IAELC(UniMod:4)DDPKERDDILR	2	IAELC(UniMod:4)DDPKERDDILR2	15281.7	5971.61	10366.6
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	IAELCDDPKERDDILR	IAELC(UniMod:4)DDPKERDDILR	3	IAELC(UniMod:4)DDPKERDDILR3	348818	290584	317921
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	IAELCDDPKERDDILR	IAELC(UniMod:4)DDPKERDDILR	4	IAELC(UniMod:4)DDPKERDDILR4	334251	301057	381353
D3ZCK4	D3ZCK4	D3ZCK4_RAT	Def6	DEF6 guanine nucleotide exchange factor	1	IAELEEMQER	IAELEEMQER	2	IAELEEMQER2	8995.23	9532.38	9772.55
A0A0G2K1A4	A0A0G2K1A4	A0A0G2K1A4_RAT	Evi5l	Ecotropic viral integration site 5-like	1	IAELEIQR	IAELEIQR	2	IAELEIQR2	6101.91	9523.17	11036.1
A0A0G2K1A4	A0A0G2K1A4	A0A0G2K1A4_RAT	Evi5l	Ecotropic viral integration site 5-like	1	IAELEIQREEGR	IAELEIQREEGR	3	IAELEIQREEGR3	34778.5	36993	22286.1
P05544	P05544	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	1	IAELFSDLEERTSMVLVNYLLFK	IAELFSDLEERTSMVLVNYLLFK	3	IAELFSDLEERTSMVLVNYLLFK3		8888	
P05545	P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	1	IAELFSELDER	IAELFSELDER	2	IAELFSELDER2	6.29618e+06	5.76951e+06	5.92113e+06
P05545	P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	1	IAELFSELDER	IAELFSELDER	3	IAELFSELDER3	11531.7	8181.25	13915.7
Q3KR59	Q3KR59	UBP10_RAT	Usp10	Ubiquitin carboxyl-terminal hydrolase 10	1	IAELLETVTLVHKPVSLQPR	IAELLETVTLVHKPVSLQPR	4	IAELLETVTLVHKPVSLQPR4	29189.2	27205.4	24294.1
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	IAELMPGASGAEVK	IAELMPGASGAEVK	2	IAELMPGASGAEVK2	170637	144649	176876
P14270	P14270	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	1	IAELSGNRPLTVIMHTIFQER	IAELSGNRPLTVIMHTIFQER	4	IAELSGNRPLTVIMHTIFQER4	18416.5	32381.8	15731
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	IAELTSQLQLADSK	IAELTSQLQLADSK	2	IAELTSQLQLADSK2	8624.1	3863.61	8971.8
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	IAELVAAEFFDQGDR	IAELVAAEFFDQGDR	2	IAELVAAEFFDQGDR2	95368.4	71568.9	102431
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	IAELVAAEFFDQGDR	IAELVAAEFFDQGDR	3	IAELVAAEFFDQGDR3	36942.9	40373.9	57009.9
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	IAELVAAEFFDQGDRER	IAELVAAEFFDQGDRER	3	IAELVAAEFFDQGDRER3	294810	278573	262357
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	IAEMTDIKPILR	IAEMTDIKPILR	3	IAEMTDIKPILR3	45183.7	49257.9	53026.7
Q9WTT2	Q9WTT2	CLPB_RAT	Clpb	Mitochondrial disaggregase	1	IAENLGDVQISDK	IAENLGDVQISDK	2	IAENLGDVQISDK2	2864.85	3795.75	2929.39
O08839	O08839	BIN1_RAT	Bin1	Myc box-dependent-interacting protein 1	1	IAENNDLLWMDYHQK	IAENNDLLWMDYHQK	3	IAENNDLLWMDYHQK3		4086	1388.33
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	IAEPDAR	IAEPDAR	2	IAEPDAR2	87393.4	100542	101448
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	IAEQEHVQEDLK	IAEQEHVQEDLK	2	IAEQEHVQEDLK2	2938.09	5770.89	2809.04
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	IAEQEHVQEDLK	IAEQEHVQEDLK	3	IAEQEHVQEDLK3	71649.4	76678.9	62591.9
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	IAEQMHSK	IAEQMHSK	2	IAEQMHSK2			14760.9
Q5U302	Q5U302	Q5U302_RAT	Ctnna1	Catenin alpha 1	1	IAEQVASFQEEK	IAEQVASFQEEK	2	IAEQVASFQEEK2	2497.26		
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	IAESALIFR	IAESALIFR	2	IAESALIFR2	5085.56	1842.9	2004.45
A0A096MKE0	A0A096MKE0	A0A096MKE0_RAT	Asph	Aspartate-beta-hydroxylase	1	IAESIPYLK	IAESIPYLK	2	IAESIPYLK2	16114.5	26487	18177.7
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	IAESLGGSGYSVER	IAESLGGSGYSVER	2	IAESLGGSGYSVER2	44631.2	53115.7	48364.6
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	IAESLSLLK	IAESLSLLK	2	IAESLSLLK2	94948.5	119136	95276.9
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	IAESNHIK	IAESNHIK	1	IAESNHIK1			3019.68
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	IAESNHIK	IAESNHIK	2	IAESNHIK2	696103		123803
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	IAESTEWQEK	IAESTEWQEK	2	IAESTEWQEK2	25168.9	18692.8	26536.2
Q07647	Q07647	GTR3_RAT	Slc2a3	Solute carrier family 2, facilitated glucose transporter member 3	1	IAESVEMLILGR	IAESVEMLILGR	2	IAESVEMLILGR2	31756.4	25915.3	23161.6
G3V901	G3V901	G3V901_RAT	Ext1	Exostosin glycosyltransferase 1	1	IAESYQNILAAIEGSR	IAESYQNILAAIEGSR	3	IAESYQNILAAIEGSR3	2402.1	6014.93	
A0A8I5Y4X4	A0A8I5Y4X4	A0A8I5Y4X4_RAT	Nub1	Negative regulator of ubiquitin-like proteins 1	1	IAETFGFQENYIK	IAETFGFQENYIK	2	IAETFGFQENYIK2	10685.3	7242.84	5593.17
P97531	P97531	CIP4_RAT	Trip10	Cdc42-interacting protein 4	1	IAETLGNIER	IAETLGNIER	2	IAETLGNIER2	12595.9		9735.27
D4A3X7	D4A3X7	D4A3X7_RAT	Snx33	Sorting nexin	1	IAETYSIEMGPR	IAETYSIEMGPR	2	IAETYSIEMGPR2	10111.1	7439.35	
P86252	P86252	PURA_RAT	Pura	Transcriptional activator protein Pur-alpha	1	IAEVGAGGNK	IAEVGAGGNK	1	IAEVGAGGNK1	4308.12	6727.03	6589.47
P86252	P86252	PURA_RAT	Pura	Transcriptional activator protein Pur-alpha	1	IAEVGAGGNK	IAEVGAGGNK	2	IAEVGAGGNK2	385573	350125	392802
Q68A21	Q68A21	PURB_RAT	Purb	Transcriptional activator protein Pur-beta	1	IAEVGAGGSK	IAEVGAGGSK	1	IAEVGAGGSK1	2417.9		
Q68A21	Q68A21	PURB_RAT	Purb	Transcriptional activator protein Pur-beta	1	IAEVGAGGSK	IAEVGAGGSK	2	IAEVGAGGSK2	594154	653407	656116
Q5U2Q3	Q5U2Q3	CK054_RAT		Ester hydrolase C11orf54 homolog	1	IAEVGGVPYLLPLVNK	IAEVGGVPYLLPLVNK	2	IAEVGGVPYLLPLVNK2	6039.31	7309.13	6440.13
Q4G069	Q4G069	RMD1_RAT	Rmdn1	Regulator of microtubule dynamics protein 1	1	IAEVLFANPPSSTYEEALK	IAEVLFANPPSSTYEEALK	3	IAEVLFANPPSSTYEEALK3	3666.15	17864	6504.38
P41565	P41565	IDHG1_RAT	Idh3g	Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial	1	IAEYAFK	IAEYAFK	2	IAEYAFK2	122352	157419	146120
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	IAEYLYANK	IAEYLYANK	2	IAEYLYANK2	38934.4	33283.2	46577.4
P62271	D3ZM33;P62271;A0A0G2KA79	RS18_RAT	Rps18	Small ribosomal subunit protein uS13	0	IAFAITAIK	IAFAITAIK	2	IAFAITAIK2	46163.8	46370.8	51472.2
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	IAFDAESEPNNSSGSMEK	IAFDAESEPNNSSGSMEK	2	IAFDAESEPNNSSGSMEK2	6809.3	5461.45	6625
P58751	P58751	RELN_RAT	Reln	Reelin	1	IAFDMFMEDK	IAFDMFMEDK	2	IAFDMFMEDK2	57497.2	66306.7	60734.4
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	IAFFSELK	IAFFSELK	2	IAFFSELK2	44335.5	48368.9	49342.2
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	IAFFTLPK	IAFFTLPK	2	IAFFTLPK2	29383.9	38152.2	29163.4
P30839	P30839	AL3A2_RAT	Aldh3a2	Aldehyde dehydrogenase family 3 member A2	1	IAFGGETDEATR	IAFGGETDEATR	2	IAFGGETDEATR2	43983.2	34020.9	46309.1
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	IAFIFNNLSQSNMTQK	IAFIFNNLSQSNMTQK	2	IAFIFNNLSQSNMTQK2	2919.87	3443.05	
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	IAFIFNNLSQSNMTQK	IAFIFNNLSQSNMTQK	3	IAFIFNNLSQSNMTQK3	5206.08	6404.23	
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	IAFIMDESNVLDSGFLER	IAFIMDESNVLDSGFLER	3	IAFIMDESNVLDSGFLER3	16442.7	17389.6	13112.5
P58405	P58405	STRN3_RAT	Strn3	Striatin-3	1	IAFLQGER	IAFLQGER	2	IAFLQGER2	132514	142727	162803
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	IAFQLAK	IAFQLAK	2	IAFQLAK2	67983.9	72594.4	71691.8
Q5I0D1	Q5I0D1	GLOD4_RAT	Glod4	Glyoxalase domain-containing protein 4	1	IAFSCPQK	IAFSC(UniMod:4)PQK	2	IAFSC(UniMod:4)PQK2	44671.2	45974.9	46499.6
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	IAFSTTSLLK	IAFSTTSLLK	2	IAFSTTSLLK2	35084.6	27888.9	44947.2
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	IAGAGLLFVGGGIGGTILYAK	IAGAGLLFVGGGIGGTILYAK	3	IAGAGLLFVGGGIGGTILYAK3	1344.34		1566.31
D3ZCT7	D3ZCT7	D3ZCT7_RAT	Sec23b	Protein transport protein SEC23	1	IAGAIGPCVSLNVK	IAGAIGPC(UniMod:4)VSLNVK	2	IAGAIGPC(UniMod:4)VSLNVK2	16739.4	11816.3	11394.3
P18484	P18484;A0A8I6A4J2	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	0	IAGDYVSEEVWYR	IAGDYVSEEVWYR	2	IAGDYVSEEVWYR2	9191.18	3894.89	10540.8
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	IAGGDDPTEVSSEK	IAGGDDPTEVSSEK	2	IAGGDDPTEVSSEK2	12802.2	9894.76	12597
P06685	Q64541;P06685;P06686	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	0	IAGLCNR	IAGLC(UniMod:4)NR	2	IAGLC(UniMod:4)NR2	178871	163555	171695
P11915	P11915	SCP2_RAT	Scp2	Sterol carrier protein 2	1	IAGNMGLAMK	IAGNMGLAMK	2	IAGNMGLAMK2	139136	109002	133116
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	IAGPGLSSCVR	IAGPGLSSC(UniMod:4)VR	2	IAGPGLSSC(UniMod:4)VR2	11297.7	10436.5	3704.69
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	IAGQISASVAQQR	IAGQISASVAQQR	2	IAGQISASVAQQR2	11176.2	12286.3	14001.1
P17074	F1LYF3;D3ZUD7;D3ZGN8;P17074	RS19_RAT	Rps19	Small ribosomal subunit protein eS19	0	IAGQVAAANK	IAGQVAAANK	2	IAGQVAAANK2	38764	28014.4	22685.3
D4A8B0	D4A8B0	D4A8B0_RAT	Sec14l5	SEC14-like lipid binding 5	1	IAGVEHVVFIQR	IAGVEHVVFIQR	3	IAGVEHVVFIQR3	31503.4	21022.7	30645.8
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	IAGYRLTVGLTR	IAGYRLTVGLTR	3	IAGYRLTVGLTR3	173993	177978	201270
P04644	D3ZM01;P04644;D3ZKG6;D3ZHU9;D3ZFA8	RS17_RAT	Rps17	Small ribosomal subunit protein eS17	0	IAGYVTHLMK	IAGYVTHLMK	2	IAGYVTHLMK2	12689.1	15595.1	13710.6
F1LVX1	F1LVX1	F1LVX1_RAT	Dnajc1	DnaJ heat shock protein family (Hsp40) member C1	1	IAHELGR	IAHELGR	2	IAHELGR2		15204.2	
P16310	P16310	GHR_RAT	Ghr	Growth hormone receptor	1	IAHEWTPEWK	IAHEWTPEWK	3	IAHEWTPEWK3	10683.9	14743.5	10422.4
Q641X8	Q641X8;A0A0G2K273	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	0	IAHFLDR	IAHFLDR	2	IAHFLDR2	101105	70284.5	65858.7
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	IAHVELADAGQYR	IAHVELADAGQYR	2	IAHVELADAGQYR2		1767.81	
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	IAHVELADAGQYR	IAHVELADAGQYR	3	IAHVELADAGQYR3	22959.2	21585.7	28861
P04182	P04182	OAT_RAT	Oat	Ornithine aminotransferase, mitochondrial	1	IAIAALEVLEEEHLAENADK	IAIAALEVLEEEHLAENADK	3	IAIAALEVLEEEHLAENADK3		12165.1	9133.96
A0A8I5YC36	A0A8I5YC36	A0A8I5YC36_RAT	Ranbp2	RAN binding protein 2	1	IAIAVLEETTR	IAIAVLEETTR	2	IAIAVLEETTR2	1884.32	4306.49	
A0A8I6GFX3	A0A8I6GFX3	A0A8I6GFX3_RAT	Tut4	RNA uridylyltransferase	1	IAIEDPFSVK	IAIEDPFSVK	2	IAIEDPFSVK2	1627.75	2175.51	
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	IAIEDPYSVK	IAIEDPYSVK	2	IAIEDPYSVK2	16217.5	16296.7	7498.32
B3DMA2	B3DMA2	ACD11_RAT	Acad11	Acyl-CoA dehydrogenase family member 11	1	IAIEEIR	IAIEEIR	2	IAIEEIR2	47980.3	38070.1	48642
A0A8I6A502	A0A8I6A502	A0A8I6A502_RAT	Tns3	Tensin 3	1	IAIEPAQLLK	IAIEPAQLLK	2	IAIEPAQLLK2	20428.8	14700.7	12612.7
O70199	O70199	UGDH_RAT	Ugdh	UDP-glucose 6-dehydrogenase	1	IAILGFAFK	IAILGFAFK	2	IAILGFAFK2	1051.74	3873.75	2079.61
Q62639	Q62639	RHEB_RAT	Rheb	GTP-binding protein Rheb	1	IAILGYR	IAILGYR	2	IAILGYR2		175406	
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	IAILHENFTTVKPEDAYEDFIVKPPVR	IAILHENFTTVKPEDAYEDFIVKPPVR	4	IAILHENFTTVKPEDAYEDFIVKPPVR4	21804.2	21814.6	11485.7
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	IAILTCPFEPPKPK	IAILTC(UniMod:4)PFEPPKPK	2	IAILTC(UniMod:4)PFEPPKPK2	21756.4	22651.7	12722.5
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	IAILTCPFEPPKPK	IAILTC(UniMod:4)PFEPPKPK	3	IAILTC(UniMod:4)PFEPPKPK3	226106	138951	181602
A0A8I6AIV4	A0A8I5YB95;A0A8I6AIV4	A0A8I6AIV4_RAT	Dctn3l1	Dynactin 3-like 1	0	IAIPEASK	IAIPEASK	2	IAIPEASK2	312137	274702	272106
Q00438	Q00438	PTBP1_RAT	Ptbp1	Polypyrimidine tract-binding protein 1	1	IAIPGLAGAGNSVLLVSNLNPER	IAIPGLAGAGNSVLLVSNLNPER	3	IAIPGLAGAGNSVLLVSNLNPER3		3472.98	2806.05
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	IAIQHLDK	IAIQHLDK	2	IAIQHLDK2	113322	79873.2	72242.1
Q9JI03	Q9JI03	CO5A1_RAT	Col5a1	Collagen alpha-1(V) chain	1	IAISVYK	IAISVYK	2	IAISVYK2	83343.2	71489.1	74200.9
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	IAIVGAGIGGTSSAYYLR	IAIVGAGIGGTSSAYYLR	2	IAIVGAGIGGTSSAYYLR2	70239.1	77449.1	84453.8
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	IAIVGAGIGGTSSAYYLR	IAIVGAGIGGTSSAYYLR	3	IAIVGAGIGGTSSAYYLR3	8515.42	10187.6	9538.3
A0A8I6GEV9	A0A8I6GEV9	A0A8I6GEV9_RAT	Abce1	ATP binding cassette subfamily E member 1	1	IAIVNHDK	IAIVNHDK	2	IAIVNHDK2	7166.05	5131.44	2663.99
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	IAIVSVSGSLR	IAIVSVSGSLR	2	IAIVSVSGSLR2	2705.36	2952.32	6316.02
P63074	P63074	IF4E_RAT	Eif4e	Eukaryotic translation initiation factor 4E	1	IAIWTTECENR	IAIWTTEC(UniMod:4)ENR	2	IAIWTTEC(UniMod:4)ENR2	62285.1	46407.5	49618.6
P63326	F1LT36;D3ZCN9;D3ZJY5;Q7TP86;P63326	RS10_RAT	Rps10	Small ribosomal subunit protein eS10	0	IAIYELLFK	IAIYELLFK	2	IAIYELLFK2	19990.9	15477.5	14016.9
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	IAKEAVMNINK	IAKEAVMNINK	3	IAKEAVMNINK3	2943.5	2781.76	8399.07
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	IALALNR	IALALNR	2	IALALNR2	104589	88541.9	96551.5
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	IALDKNPETRPSAAQLLQHPFVSTVTSNK	IALDKNPETRPSAAQLLQHPFVSTVTSNK	4	IALDKNPETRPSAAQLLQHPFVSTVTSNK4	10239.2		4916.11
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	IALEEDER	IALEEDER	2	IALEEDER2	22438.5	29868.7	21086.5
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	IALEEDERLER	IALEEDERLER	3	IALEEDERLER3	224182	239733	148099
D3ZFJ6	D3ZFJ6	D3ZFJ6_RAT	Lactb	Lactamase, beta	1	IALEFDKDRAD	IALEFDKDRAD	3	IALEFDKDRAD3	36187	34255.1	52091.4
Q08850	Q08850	STX4_RAT	Stx4	Syntaxin-4	1	IALENQK	IALENQK	2	IALENQK2	112196	123720	122705
P15943	P15943	APLP2_RAT	Aplp2	Amyloid beta precursor like protein 2	1	IALENYLAALQSDPPRPHR	IALENYLAALQSDPPRPHR	4	IALENYLAALQSDPPRPHR4	110440	143775	123915
P47816	P47816	PDCD2_RAT	Pdcd2	Programmed cell death protein 2	1	IALEPEQILR	IALEPEQILR	2	IALEPEQILR2	36811.4	38763.8	42256.2
P08689	P08689	SHBG_RAT	Shbg	Sex hormone-binding globulin	1	IALGGLLLPTSK	IALGGLLLPTSK	2	IALGGLLLPTSK2	12421.2	15134.9	15448.8
P07756	P07756	CPSM_RAT	Cps1	Carbamoyl-phosphate synthase [ammonia], mitochondrial	1	IALGIPLPEIK	IALGIPLPEIK	2	IALGIPLPEIK2	3744.03	3581.2	1203.17
F1LVL6	F1LVL6	F1LVL6_RAT	Crtc3	CREB regulated transcription coactivator 3	1	IALHTQR	IALHTQR	2	IALHTQR2	11425.3		18249.9
Q5PQK5	Q5PQK5	Q5PQK5_RAT	Rdx	Radixin	1	IALLEEAK	IALLEEAK	2	IALLEEAK2	24429.4	22389.9	25554.6
P31977	P31977	EZRI_RAT	Ezr	Ezrin	1	IALLEEAR	IALLEEAR	2	IALLEEAR2	11617.1		
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	IALLNVELELK	IALLNVELELK	2	IALLNVELELK2	61193.7	80003.8	55632.4
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	IALLQSLLDDANLR	IALLQSLLDDANLR	2	IALLQSLLDDANLR2	7429.71	10554.4	10908.9
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	IALLQSLLDDANLR	IALLQSLLDDANLR	3	IALLQSLLDDANLR3	8448.41	9330.27	9194.53
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	IALLQSLLDDANLRK	IALLQSLLDDANLRK	3	IALLQSLLDDANLRK3	19501.4	12971.7	12562.7
A0A8I6A1H4	A0A8I6A1H4	A0A8I6A1H4_RAT	Tmppe	Transmembrane protein with metallophosphoesterase domain	1	IALLSDIHLGPTVGR	IALLSDIHLGPTVGR	2	IALLSDIHLGPTVGR2	3864.76		3690.69
A0A8I6A1H4	A0A8I6A1H4	A0A8I6A1H4_RAT	Tmppe	Transmembrane protein with metallophosphoesterase domain	1	IALLSDIHLGPTVGR	IALLSDIHLGPTVGR	3	IALLSDIHLGPTVGR3	42641	41578	41467.2
D3ZE15	D3ZE15;A0A8I6A382;F1LZC5	D3ZE15_RAT	Ndufa13	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13	0	IALMPLLQAEK	IALMPLLQAEK	2	IALMPLLQAEK2	146177	154176	148979
D3ZE15	D3ZE15;A0A8I6A382;F1LZC5	D3ZE15_RAT	Ndufa13	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13	0	IALMPLLQAEKDR	IALMPLLQAEKDR	3	IALMPLLQAEKDR3		4489.6	7554.97
Q9QXY4	Q9QXY4	OGFR_RAT	Ogfr	Opioid growth factor receptor	1	IALNLEECALSPISQEPR	IALNLEEC(UniMod:4)ALSPISQEPR	3	IALNLEEC(UniMod:4)ALSPISQEPR3	14450.9	10510.4	16082.1
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	IALNVAGK	IALNVAGK	2	IALNVAGK2	136245	173792	145591
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	IALPEEFSQVYSLADGIR	IALPEEFSQVYSLADGIR	3	IALPEEFSQVYSLADGIR3	14283.2	9812.02	19356.2
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	IALQLDDGCR	IALQLDDGC(UniMod:4)R	2	IALQLDDGC(UniMod:4)R2	36206.1	50357.6	57760.2
Q4QQT4	Q4QQT4	2AAB_RAT	Ppp2r1b	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	1	IALSDLIPAFQSLLR	IALSDLIPAFQSLLR	2	IALSDLIPAFQSLLR2		3904.37	
Q4QQT4	Q4QQT4	2AAB_RAT	Ppp2r1b	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	1	IALSDLIPAFQSLLR	IALSDLIPAFQSLLR	3	IALSDLIPAFQSLLR3	4123.58		
F1LVL6	F1LVL6	F1LVL6_RAT	Crtc3	CREB regulated transcription coactivator 3	1	IALSSSLNSHPQPSVANASALHPSLR	IALSSSLNSHPQPSVANASALHPSLR	4	IALSSSLNSHPQPSVANASALHPSLR4	5894.78		
P05426	P05426	RL7_RAT	Rpl7	Large ribosomal subunit protein uL30	1	IALTDNSLVAR	IALTDNSLVAR	2	IALTDNSLVAR2	36930.5	35181.4	35088.7
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	IALVITDGR	IALVITDGR	2	IALVITDGR2	81789.5	67375.7	56477.4
A0A0G2JVY4	A0A0G2JVY4	A0A0G2JVY4_RAT	Tmem63a	Transmembrane protein 63a	1	IALVSEAGSEAR	IALVSEAGSEAR	2	IALVSEAGSEAR2	7927.37	13230	9744.47
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	IALYELMK	IALYELMK	2	IALYELMK2	18274	22019.4	21016.5
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	IAMDQYGK	IAMDQYGK	2	IAMDQYGK2	53826.9	57407.8	45881.6
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	IAMENDDGRTEEEK	IAMENDDGRTEEEK	3	IAMENDDGRTEEEK3	34671.4	48959.6	42009.4
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	IAMGAFDR	IAMGAFDR	2	IAMGAFDR2	250160	220167	226384
Q499T5	Q499T5	Q499T5_RAT	Capn7	Calpain 7	1	IAMHSDSQTFSK	IAMHSDSQTFSK	3	IAMHSDSQTFSK3	19075.4	11906.1	
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	IAMQGEGK	IAMQGEGK	2	IAMQGEGK2	61724	60568.6	56892.1
P15651	P15651	ACADS_RAT	Acads	Short-chain specific acyl-CoA dehydrogenase, mitochondrial	1	IAMQTLDMGR	IAMQTLDMGR	2	IAMQTLDMGR2	20049.8	19932.4	25021.9
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	IAMTTCEQIVR	IAMTTC(UniMod:4)EQIVR	2	IAMTTC(UniMod:4)EQIVR2	1833.49	3901.92	2097.81
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	IANAVVQNLEQGPVQTHISEVIR	IANAVVQNLEQGPVQTHISEVIR	3	IANAVVQNLEQGPVQTHISEVIR3	42111.8	39283.9	46914.9
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	IANCIVHSTDK	IANC(UniMod:4)IVHSTDK	2	IANC(UniMod:4)IVHSTDK2	11464.3	16645.6	9853.19
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	IANCIVHSTDK	IANC(UniMod:4)IVHSTDK	3	IANC(UniMod:4)IVHSTDK3	129901	138412	98751.3
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	IANCIVHSTDKGPNSALVQQLIK	IANC(UniMod:4)IVHSTDKGPNSALVQQLIK	4	IANC(UniMod:4)IVHSTDKGPNSALVQQLIK4	22605	37374.2	28237.2
P36953	P36953	AFAM_RAT	Afm	Afamin	1	IANDAIQDMLCDMK	IANDAIQDMLC(UniMod:4)DMK	2	IANDAIQDMLC(UniMod:4)DMK2	186144	178861	161265
P13221	P13221	AATC_RAT	Got1	Aspartate aminotransferase, cytoplasmic	1	IANDHSLNHEYLPILGLAEFR	IANDHSLNHEYLPILGLAEFR	3	IANDHSLNHEYLPILGLAEFR3	20410.8	11323.9	
P13221	P13221	AATC_RAT	Got1	Aspartate aminotransferase, cytoplasmic	1	IANDHSLNHEYLPILGLAEFR	IANDHSLNHEYLPILGLAEFR	4	IANDHSLNHEYLPILGLAEFR4	19435.6	38049.9	24308.5
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	IANEQISASSTFSDGR	IANEQISASSTFSDGR	2	IANEQISASSTFSDGR2	69821.4	67958.9	58766.4
A2VCX1	A2VCX1	TIPRL_RAT	Tiprl	TIP41-like protein	1	IANLMHVPPSLFTEPNEISQYLPIK	IANLMHVPPSLFTEPNEISQYLPIK	3	IANLMHVPPSLFTEPNEISQYLPIK3	12013.7	10835.3	9130.38
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	IANLQTDLSDGLR	IANLQTDLSDGLR	2	IANLQTDLSDGLR2	48980.3	41162.5	38728
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	IANLQTDLSDGLR	IANLQTDLSDGLR	3	IANLQTDLSDGLR3	31993.8	26050.8	21970.9
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	IANLQTDLSDGLRLIALLEVLSQKK	IANLQTDLSDGLRLIALLEVLSQKK	4	IANLQTDLSDGLRLIALLEVLSQKK4		2005.18	7376.37
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	IANMFELSLPFR	IANMFELSLPFR	2	IANMFELSLPFR2	13510	16421.9	11580.3
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	IANNFNVSVDEIK	IANNFNVSVDEIK	2	IANNFNVSVDEIK2	35873.3	35417.2	44005.2
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	IANNPTTDKENK	IANNPTTDKENK	2	IANNPTTDKENK2			20047.2
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	IANNPTTDKENK	IANNPTTDKENK	3	IANNPTTDKENK3			49621
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	IANPDQLLTQDVEK	IANPDQLLTQDVEK	2	IANPDQLLTQDVEK2	25476.2	30125	22661.5
A0A8I6AH91	A0A8I6AH91	A0A8I6AH91_RAT	Pcbp1	Poly(rC) binding protein 1	1	IANPVEGSSGR	IANPVEGSSGR	2	IANPVEGSSGR2	142091	138548	127715
Q6AYU2	Q6AYU2	Q6AYU2_RAT	Pcbp2	Poly(rC) binding protein 2	1	IANPVEGSTDR	IANPVEGSTDR	2	IANPVEGSTDR2	94186	84775.3	110020
A0A0G2K1A2	A0A0G2K1A2	A0A0G2K1A2_RAT	Mpo	Myeloperoxidase	1	IANVFTNAFR	IANVFTNAFR	2	IANVFTNAFR2	65156.4	61004.7	41052.6
Q63616	Q63616	VP33B_RAT	Vps33b	Vacuolar protein sorting-associated protein 33B	1	IANVSILK	IANVSILK	2	IANVSILK2	80710.5	72757.8	52870.4
Q920J4	Q920J4	TXNL1_RAT	Txnl1	Thioredoxin-like protein 1	1	IAPAFSSMSNK	IAPAFSSMSNK	2	IAPAFSSMSNK2	383116	403297	374887
A0A8I6ABN1	A0A8I6ABN1	A0A8I6ABN1_RAT	Snx19	Sorting nexin 19	1	IAPALSIAEAQDK	IAPALSIAEAQDK	2	IAPALSIAEAQDK2	15136.6	13152.8	9738.06
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	IAPASQIDSAWIVYNKPK	IAPASQIDSAWIVYNKPK	3	IAPASQIDSAWIVYNKPK3	13169.7	15415.7	18546.8
Q9QZK5	Q9QZK5	HTRA1_RAT	Htra1	Serine protease HTRA1	1	IAPAVVHIELYR	IAPAVVHIELYR	3	IAPAVVHIELYR3	24846.1	26377.2	20673.4
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	IAPDLPDYER	IAPDLPDYER	2	IAPDLPDYER2	110978	99125	96026.2
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	IAPDVLR	IAPDVLR	2	IAPDVLR2	161581	240857	218234
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	IAPELYHK	IAPELYHK	2	IAPELYHK2	38010.3	15788.3	26328.9
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	IAPETAVK	IAPETAVK	1	IAPETAVK1		3842.79	2307.35
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	IAPETAVK	IAPETAVK	2	IAPETAVK2	1.03691e+06	989982	1.12892e+06
A0A0G2JSU2	A0A0G2JSU2	A0A0G2JSU2_RAT	Adgra3	Adhesion G protein-coupled receptor A3	1	IAPGAFWGLSSLK	IAPGAFWGLSSLK	2	IAPGAFWGLSSLK2		9384.96	
D4ADD8	D4ADD8	D4ADD8_RAT	Dctn6	Dynactin subunit 6	1	IAPGAVVCVESEIR	IAPGAVVC(UniMod:4)VESEIR	2	IAPGAVVC(UniMod:4)VESEIR2	6562.56	4135.03	4417.48
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	IAPGVVTMR	IAPGVVTMR	2	IAPGVVTMR2	17190.5	13367	15759.5
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	IAPLAEGALPYNLAELQR	IAPLAEGALPYNLAELQR	2	IAPLAEGALPYNLAELQR2	49630.8	47079.2	63149.4
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	IAPLAEGALPYNLAELQR	IAPLAEGALPYNLAELQR	3	IAPLAEGALPYNLAELQR3	27109.1	25930.1	40634.5
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	IAPLEEGMLPFNLAEAQR	IAPLEEGMLPFNLAEAQR	3	IAPLEEGMLPFNLAEAQR3	103189	96500.1	103431
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	IAPNHLNVYINLANLIR	IAPNHLNVYINLANLIR	3	IAPNHLNVYINLANLIR3	15134	4959.03	5281.37
A0A8I5ZLK2	A0A8I5ZLK2	A0A8I5ZLK2_RAT	Mgst2	Microsomal glutathione S-transferase 2	1	IAPPAVTGSLEFER	IAPPAVTGSLEFER	2	IAPPAVTGSLEFER2	44119.3	46115.6	41856
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	IAPPDGTAGPPDSR	IAPPDGTAGPPDSR	2	IAPPDGTAGPPDSR2	40118.8	22421.9	37177.5
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	IAPSAAASQELYEPGLEPSATAK	IAPSAAASQELYEPGLEPSATAK	3	IAPSAAASQELYEPGLEPSATAK3	5265.44	6174.57	
Q9QWJ9	Q9QWJ9	NRP1_RAT	Nrp1	Neuropilin-1	1	IAPSPVVSSGPFLFIK	IAPSPVVSSGPFLFIK	2	IAPSPVVSSGPFLFIK2	18145	22720.7	15608.6
A0A0G2K1N9	A0A0G2K1N9	A0A0G2K1N9_RAT	Selenoo	Selenoprotein O	1	IAPTFIR	IAPTFIR	2	IAPTFIR2	25887.2	25434.9	23175
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	IAPVENDNSYDELK	IAPVENDNSYDELK	2	IAPVENDNSYDELK2	19164.9	21689.8	17780.6
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	IAQAAELADR	IAQAAELADR	2	IAQAAELADR2	25006	15924.8	19665.8
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	IAQAAELADREK	IAQAAELADREK	2	IAQAAELADREK2	2761.59	1751.86	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	IAQAAELADREK	IAQAAELADREK	3	IAQAAELADREK3		651555	688136
D4AB01	D4AB01	D4AB01_RAT	Hint2	Histidine triad nucleotide binding protein 2	1	IAQAEGLK	IAQAEGLK	2	IAQAEGLK2	77127.5	117102	53057.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	IAQDGVSTSATTNLK	IAQDGVSTSATTNLK	2	IAQDGVSTSATTNLK2	31638.2	2.67807e+06	48684.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	IAQDGVSTSATTNLK	IAQDGVSTSATTNLK	3	IAQDGVSTSATTNLK3	113112	112012	123474
P31977	P31977;A0A8I5ZWW5	EZRI_RAT	Ezr	Ezrin	0	IAQDLEMYGINYFEIK	IAQDLEMYGINYFEIK	2	IAQDLEMYGINYFEIK2	7185.03		
O35763	O35763	MOES_RAT	Msn	Moesin	1	IAQDLEMYGVNYFSIK	IAQDLEMYGVNYFSIK	2	IAQDLEMYGVNYFSIK2	30705	34906.7	32786.7
O35763	O35763	MOES_RAT	Msn	Moesin	1	IAQDLEMYGVNYFSIK	IAQDLEMYGVNYFSIK	3	IAQDLEMYGVNYFSIK3	5156.47	7666.16	11142.9
Q767I8	Q767I8	PCDA4_RAT	Pcdha4	Protocadherin alpha-4	1	IAQDLGLELAELVPR	IAQDLGLELAELVPR	2	IAQDLGLELAELVPR2	4442.45		
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	IAQEDPEK	IAQEDPEK	2	IAQEDPEK2	18555		14619.1
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	IAQEDPEKQR	IAQEDPEKQR	2	IAQEDPEKQR2			1017.28
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	IAQEDPEKQR	IAQEDPEKQR	3	IAQEDPEKQR3	14323.2		18071.6
Q62796	Q62796	RBP1_RAT	Ralbp1	RalA-binding protein 1	1	IAQEIASLSK	IAQEIASLSK	2	IAQEIASLSK2	3146	4455.32	6888.8
P21775	P07871;P21775	THIKA_RAT	Acaa1a	3-ketoacyl-CoA thiolase A, peroxisomal	0	IAQFLSGIPETVPLSAVNR	IAQFLSGIPETVPLSAVNR	3	IAQFLSGIPETVPLSAVNR3		52234.9	37958.1
D3ZLZ7	D3ZLZ7	IMDH1_RAT	Impdh1	Inosine-5'-monophosphate dehydrogenase 1	1	IAQGVSGSIQDK	IAQGVSGSIQDK	2	IAQGVSGSIQDK2	10672.6	10985	5456.3
Q32PX7	Q32PX7	FUBP1_RAT	Fubp1	Far upstream element-binding protein 1	1	IAQITGPPDR	IAQITGPPDR	2	IAQITGPPDR2	9100.76		7977.52
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	IAQLCNK	IAQLC(UniMod:4)NK	2	IAQLC(UniMod:4)NK2	22367.8	19331.5	19044.4
P19511	P19511	AT5F1_RAT	Atp5pb	ATP synthase F(0) complex subunit B1, mitochondrial	1	IAQLEEIK	IAQLEEIK	1	IAQLEEIK1	4488.52	5983.72	1699.83
P19511	P19511	AT5F1_RAT	Atp5pb	ATP synthase F(0) complex subunit B1, mitochondrial	1	IAQLEEIK	IAQLEEIK	2	IAQLEEIK2	382624	324017	337140
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	IAQLEEQLDNETK	IAQLEEQLDNETK	2	IAQLEEQLDNETK2	159167	231095	144894
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	IAQLEEQLDNETK	IAQLEEQLDNETK	3	IAQLEEQLDNETK3	1.98998e+06	2.60462e+06	2.54064e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	IAQLEEQLDNETKER	IAQLEEQLDNETKER	2	IAQLEEQLDNETKER2	21620.4	23878	18204.4
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	IAQLEEQLDNETKER	IAQLEEQLDNETKER	3	IAQLEEQLDNETKER3	149901	181113	188245
P70583	P70583	DUT_RAT	Dut	Deoxyuridine 5'-triphosphate nucleotidohydrolase	1	IAQLICER	IAQLIC(UniMod:4)ER	2	IAQLIC(UniMod:4)ER2	10293.5	9098.06	6625.69
A0A0G2K3D9	A0A0G2K3D9	A0A0G2K3D9_RAT	Tmem132b	Transmembrane protein 132B	1	IAQLQDGR	IAQLQDGR	2	IAQLQDGR2	10025.7	8958.86	12665.4
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	IAQLQEALLHCGK	IAQLQEALLHC(UniMod:4)GK	2	IAQLQEALLHC(UniMod:4)GK2	4790.46	2920.13	5001.44
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	IAQLQEALLHCGK	IAQLQEALLHC(UniMod:4)GK	3	IAQLQEALLHC(UniMod:4)GK3	62859.5	61821.5	57743.2
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	IAQLYLPFVGLLLENIQR	IAQLYLPFVGLLLENIQR	3	IAQLYLPFVGLLLENIQR3	2346.22		
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	IAQLYMIQK	IAQLYMIQK	2	IAQLYMIQK2	15547.9	15507.7	12597.7
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	IAQNESELISDEAQGDTALR	IAQNESELISDEAQGDTALR	3	IAQNESELISDEAQGDTALR3	21132.4	15345.6	23062.9
Q6AYN8	Q6AYN8	Q6AYN8_RAT	Mcm7	DNA replication licensing factor MCM7	1	IAQPGDHVSVTGIFLPVLR	IAQPGDHVSVTGIFLPVLR	3	IAQPGDHVSVTGIFLPVLR3		32734.6	41203.4
P04897	P04897	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	1	IAQSDYIPTQQDVLR	IAQSDYIPTQQDVLR	2	IAQSDYIPTQQDVLR2	1.7288e+06	1.79223e+06	1.81815e+06
P04897	P04897	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	1	IAQSDYIPTQQDVLR	IAQSDYIPTQQDVLR	3	IAQSDYIPTQQDVLR3	215989	244316	281472
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	IAQWQNFNLEGGLK	IAQWQNFNLEGGLK	2	IAQWQNFNLEGGLK2	6205.67	9549.71	11907.9
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	IAQYYYTFK	IAQYYYTFK	2	IAQYYYTFK2	85255.4	76613.9	74611.7
P97700	P97700	M2OM_RAT	Slc25a11	Mitochondrial 2-oxoglutarate/malate carrier protein	1	IAREEGVPTLWR	IAREEGVPTLWR	3	IAREEGVPTLWR3	7267.81	12355.6	14431.3
F7F172	F7F172	F7F172_RAT	Mettl15	Methyltransferase like 15	1	IASAIIQAR	IASAIIQAR	2	IASAIIQAR2	4566.49	3021.34	
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	IASAIMK	IASAIMK	1	IASAIMK1	1110.62		
Q5GFD9	Q5GFD9	IMPCT_RAT	Impact	Protein IMPACT	1	IASATHNIYAYR	IASATHNIYAYR	2	IASATHNIYAYR2	2885.34	2305.48	
Q5GFD9	Q5GFD9	IMPCT_RAT	Impact	Protein IMPACT	1	IASATHNIYAYR	IASATHNIYAYR	3	IASATHNIYAYR3	40127.4	40780.8	43722.6
F1LU14	F1LU14	F1LU14_RAT	Snx32	Sorting nexin	1	IASDEDLK	IASDEDLK	2	IASDEDLK2	15656.7	12018.4	14054.9
P0C5E3	P0C5E3	PALLD_RAT	Palld	Palladin (Fragment)	1	IASDEEIQGTK	IASDEEIQGTK	2	IASDEEIQGTK2	13100.5	9284.14	12764.9
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	IASEQHILQR	IASEQHILQR	2	IASEQHILQR2	61205.4	47846.8	54802.5
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	IASEQHILQR	IASEQHILQR	3	IASEQHILQR3	1.25202e+06	1.2862e+06	1.35994e+06
Q5XIF5	Q5XIF5	DEGS1_RAT	Degs1	Sphingolipid delta(4)-desaturase DES1	1	IASEYYDNLPHYNSWIR	IASEYYDNLPHYNSWIR	3	IASEYYDNLPHYNSWIR3	40280.6	56464	63411.1
A0A096MJX4	A0A096MJX4	A0A096MJX4_RAT	Fsip2	Fibrous sheath-interacting protein 2	1	IASFIIK	IASFIIK	1	IASFIIK1	1667.1		
F1LZ05	F1LZ05	F1LZ05_RAT	Parp14	Poly [ADP-ribose] polymerase	1	IASFLGFPTQASPPK	IASFLGFPTQASPPK	2	IASFLGFPTQASPPK2		3104.44	
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	IASFVNK	IASFVNK	2	IASFVNK2	14932.8	20977.1	16959.4
D4ADS4	A0A8I6AQS8;D4ADS4	D4ADS4_RAT	Mgst3	Microsomal glutathione S-transferase 3	0	IASGLGVAWIIGR	IASGLGVAWIIGR	2	IASGLGVAWIIGR2	504737	459029	497651
D4ADS4	A0A8I6AQS8;D4ADS4	D4ADS4_RAT	Mgst3	Microsomal glutathione S-transferase 3	0	IASGLGVAWIIGR	IASGLGVAWIIGR	3	IASGLGVAWIIGR3	2527.27	3064.63	1724.81
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	IASGVQK	IASGVQK	1	IASGVQK1			2257.04
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	IASLEQR	IASLEQR	2	IASLEQR2	685495	602820	645346
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	IASLEVENQNLR	IASLEVENQNLR	2	IASLEVENQNLR2	1.067e+06	1.02024e+06	1.07069e+06
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	IASLEVENQNLR	IASLEVENQNLR	3	IASLEVENQNLR3	10552.7	23719.3	19778.8
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	IASLLLAK	IASLLLAK	2	IASLLLAK2	14918.7	16681.3	17707
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	IASLQDSLISK	IASLQDSLISK	2	IASLQDSLISK2	19250.4	11817.4	10872.4
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	IASMAPGALLLEAQK	IASMAPGALLLEAQK	2	IASMAPGALLLEAQK2	16824.8	22988.7	25854.4
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	IASMAPGALLLEAQKEYEK	IASMAPGALLLEAQKEYEK	3	IASMAPGALLLEAQKEYEK3	12278.9	7757.85	
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	IASMFDLTPEYR	IASMFDLTPEYR	2	IASMFDLTPEYR2	67119.8	57784.1	77222.6
P62832	P62832	RL23_RAT	Rpl23	Large ribosomal subunit protein uL14	1	IASNAGSIA	IASNAGSIA	1	IASNAGSIA1	4913.85	6478.89	4835.15
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	IASNGDEQLEK	IASNGDEQLEK	2	IASNGDEQLEK2	2330.38	4678.31	
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	IASNSATAFR	IASNSATAFR	2	IASNSATAFR2	11541.5	12454.2	6574.56
Q6AYT3	Q6AYT3;A0A8I5YBA4	RTCB_RAT	Rtcb	RNA-splicing ligase RtcB homolog	0	IASPEGQDYLK	IASPEGQDYLK	2	IASPEGQDYLK2	40342.4	30942.2	42242.4
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	IASQELGPAVDKDK	IASQELGPAVDKDK	3	IASQELGPAVDKDK3	11157.7	7809.11	4605.16
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	IASQELGPAVDKDKEALMEEILK	IASQELGPAVDKDKEALMEEILK	4	IASQELGPAVDKDKEALMEEILK4	16856.1	14952.7	20260.9
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	IASQMITEGR	IASQMITEGR	2	IASQMITEGR2	155605	174344	164440
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	IASQVAALDLGYKPGVEAIR	IASQVAALDLGYKPGVEAIR	3	IASQVAALDLGYKPGVEAIR3	125842	113778	121187
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	IASQVAALDLGYKPGVEAIRK	IASQVAALDLGYKPGVEAIRK	3	IASQVAALDLGYKPGVEAIRK3	3519.49		5583.28
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	IASQVAALDLGYKPGVEAIRK	IASQVAALDLGYKPGVEAIRK	4	IASQVAALDLGYKPGVEAIRK4	18098.8	13718	21027.2
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	IASSGIVDQPLSPVDK	IASSGIVDQPLSPVDK	2	IASSGIVDQPLSPVDK2	60310.1	56157	58185.9
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	IASSGIVDQPLSPVDK	IASSGIVDQPLSPVDK	3	IASSGIVDQPLSPVDK3	3992.98	5045.12	
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	IASSIVAQTAGIPTLPWSGSGLR	IASSIVAQTAGIPTLPWSGSGLR	3	IASSIVAQTAGIPTLPWSGSGLR3	9254.32	10437.5	15881
F7EQF3	F7EQF3	F7EQF3_RAT	Bak1	BCL2-antagonist/killer 1	1	IASSLFK	IASSLFK	2	IASSLFK2	44421.4	45801.6	50584.5
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	IASTLKDNDPPIAVAK	IASTLKDNDPPIAVAK	2	IASTLKDNDPPIAVAK2	90158.6	89366	73062.9
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	IASTLKDNDPPIAVAK	IASTLKDNDPPIAVAK	3	IASTLKDNDPPIAVAK3	1.22411e+06	1.43359e+06	1.59331e+06
D4A6B3	D4A6B3	D4A6B3_RAT	Slamf6	SLAM family member 6	1	IASVIVWSHK	IASVIVWSHK	3	IASVIVWSHK3	7297.72	4077.26	4381.03
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	IASVLGDK	IASVLGDK	2	IASVLGDK2	33290	34288.1	31477.4
A0A8I5Y661	A0A8I5Y661	A0A8I5Y661_RAT	Fam177a1	Family with sequence similarity 177, member A1	1	IASVLGISTPK	IASVLGISTPK	2	IASVLGISTPK2	109556	104671	122194
Q5QE80	Q5QE80	AOXC_RAT	Aox3	Aldehyde oxidase 3	1	IASVSDIPEEFHVSLLTPTQNPK	IASVSDIPEEFHVSLLTPTQNPK	3	IASVSDIPEEFHVSLLTPTQNPK3	3595.19	3579.68	5675.82
Q4QQS7	Q4QQS7	Q4QQS7_RAT	Umps	Uridine 5'-monophosphate synthase	1	IASWADVVNAHVVPGSGVVK	IASWADVVNAHVVPGSGVVK	3	IASWADVVNAHVVPGSGVVK3	10161.7	11533.6	14733.9
D3ZL10	D3ZL10	D3ZL10_RAT	Col6a6	Collagen type VI alpha 6 chain	1	IASYPAEQFTSK	IASYPAEQFTSK	2	IASYPAEQFTSK2	18896.2	8094	9570.09
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	IASYYYLK	IASYYYLK	2	IASYYYLK2	28340.6	32263.1	40858.6
F1LVX1	F1LVX1	F1LVX1_RAT	Dnajc1	DnaJ heat shock protein family (Hsp40) member C1	1	IATALPDDIITQR	IATALPDDIITQR	2	IATALPDDIITQR2	22755	32604.9	32526
Q8R4Z9	Q8R4Z9	MFN1_RAT	Mfn1	Mitofusin-1	1	IATEDDLVEIQGYR	IATEDDLVEIQGYR	2	IATEDDLVEIQGYR2			1948.89
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	IATEFNQLQFHAVQSK	IATEFNQLQFHAVQSK	2	IATEFNQLQFHAVQSK2	2467.61	1809.18	
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	IATEFNQLQFHAVQSK	IATEFNQLQFHAVQSK	3	IATEFNQLQFHAVQSK3	11152.9	7943.79	16844
B5DFH7	B5DFH7	B5DFH7_RAT	Traf2	TNF receptor-associated factor	1	IATFENIVCVLNR	IATFENIVC(UniMod:4)VLNR	2	IATFENIVC(UniMod:4)VLNR2		7355.59	9730.2
P51583	P51583;A0A0G2K5S4	PUR6_RAT	Paics	Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase	0	IATGSFLK	IATGSFLK	2	IATGSFLK2	95175.3	73810.4	87787.6
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	IATHGLCSK	IATHGLC(UniMod:4)SK	2	IATHGLC(UniMod:4)SK2	3506.73	6145.25	
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	IATIPAFGTIMETVIQR	IATIPAFGTIMETVIQR	2	IATIPAFGTIMETVIQR2	27151.9	20080.9	28787.3
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	IATIPAFGTIMETVIQR	IATIPAFGTIMETVIQR	3	IATIPAFGTIMETVIQR3	13886.9	13785.8	19067.4
F1M9D0	F1M9D0	F1M9D0_RAT	Map3k2	Mitogen activated protein kinase kinase kinase 2	1	IATQPTNPK	IATQPTNPK	2	IATQPTNPK2		15285.9	
Q9JID2	Q9JID2	GNA11_RAT	Gna11	Guanine nucleotide-binding protein subunit alpha-11	1	IATVGYLPTQQDVLR	IATVGYLPTQQDVLR	2	IATVGYLPTQQDVLR2	12826.5	17175.8	15954.8
Q8K4Y7	Q8K4Y7	CANT1_RAT	Cant1	Soluble calcium-activated nucleotidase 1	1	IATYVMAFTLDGR	IATYVMAFTLDGR	2	IATYVMAFTLDGR2	3782.65	3531.73	3245.29
P48500	A0A0G2JWU1;A0A8I5ZVI4;P48500	TPIS_RAT	Tpi1	Triosephosphate isomerase	0	IAVAAQNCYK	IAVAAQNC(UniMod:4)YK	2	IAVAAQNC(UniMod:4)YK2	237133	205331	239779
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	IAVAGGLFQLER	IAVAGGLFQLER	2	IAVAGGLFQLER2	127676	171794	137165
P35433	P35433	PUR1_RAT	Ppat	Amidophosphoribosyltransferase	1	IAVAHNGELVNAAR	IAVAHNGELVNAAR	3	IAVAHNGELVNAAR3	10999.4	8222.93	
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	IAVALEIGADLPSSHVIDR	IAVALEIGADLPSSHVIDR	3	IAVALEIGADLPSSHVIDR3	14510.4	18113.1	6746.45
A0A0G2JYN4	A0A0G2JYN4	A0A0G2JYN4_RAT	Ergic2	Endoplasmic reticulum-Golgi intermediate compartment protein	1	IAVDHNQMFQYFITVVPTK	IAVDHNQMFQYFITVVPTK	3	IAVDHNQMFQYFITVVPTK3	8821.22	9442.47	14994.9
D3ZLN7	D3ZLN7	D3ZLN7_RAT	Commd2	COMM domain containing 2	1	IAVEFLR	IAVEFLR	2	IAVEFLR2	9300.69	13371	9203.7
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	IAVFYVAEGQEDK	IAVFYVAEGQEDK	2	IAVFYVAEGQEDK2	11915.8	8093.7	
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	IAVGLEEGLYVIELTR	IAVGLEEGLYVIELTR	2	IAVGLEEGLYVIELTR2	5522.25	14507.6	6793.64
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	IAVGLEEGLYVIELTR	IAVGLEEGLYVIELTR	3	IAVGLEEGLYVIELTR3	5118.12	3520.24	4968.85
P62914	P62914	RL11_RAT	Rpl11	Large ribosomal subunit protein uL5	1	IAVHCTVR	IAVHC(UniMod:4)TVR	2	IAVHC(UniMod:4)TVR2	4051.74	6694.26	5206.81
A0A8I6A6S4	A0A8I6A6S4	A0A8I6A6S4_RAT	Stim2	Stromal interaction molecule 2	1	IAVHETSFMISQLK	IAVHETSFMISQLK	3	IAVHETSFMISQLK3	10289.5	4456.25	4965.9
B5DEI0	B5DEI0	B5DEI0_RAT	Pcyox1l	Pcyox1l protein	1	IAVIGAGIGGSAVAHFLQQHFGPR	IAVIGAGIGGSAVAHFLQQHFGPR	3	IAVIGAGIGGSAVAHFLQQHFGPR3			10546.8
B5DEI0	B5DEI0	B5DEI0_RAT	Pcyox1l	Pcyox1l protein	1	IAVIGAGIGGSAVAHFLQQHFGPR	IAVIGAGIGGSAVAHFLQQHFGPR	4	IAVIGAGIGGSAVAHFLQQHFGPR4	40489.4	74021.5	52753.5
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	IAVLSLSEMEPQELELELCK	IAVLSLSEMEPQELELELC(UniMod:4)K	3	IAVLSLSEMEPQELELELC(UniMod:4)K3		13441.4	
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	IAVLSLSEMEPQELELELCKK	IAVLSLSEMEPQELELELC(UniMod:4)KK	3	IAVLSLSEMEPQELELELC(UniMod:4)KK3		1812.33	
A1L1K3	A1L1K3	APC5_RAT	Anapc5	Anaphase-promoting complex subunit 5	1	IAVLVLLNEMGR	IAVLVLLNEMGR	2	IAVLVLLNEMGR2	3041.2	2481.2	2459.01
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	IAVLYVGEGQSSSELAILSNEHGSYR	IAVLYVGEGQSSSELAILSNEHGSYR	3	IAVLYVGEGQSSSELAILSNEHGSYR3	2523.67	3448.46	
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	IAVMELFR	IAVMELFR	2	IAVMELFR2	21338.9	15031.1	7271.89
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	IAVMELFRPK	IAVMELFRPK	2	IAVMELFRPK2	4129.52	9058.97	10447.3
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	IAVMELFRPK	IAVMELFRPK	3	IAVMELFRPK3	66597.9	67070.1	79738.4
Q5M7T7	Q5M7T7	Q5M7T7_RAT	Pla2g7	Phospholipase A2 group VII	1	IAVMGHSFGGATVFQALSEDQR	IAVMGHSFGGATVFQALSEDQR	3	IAVMGHSFGGATVFQALSEDQR3	18215.3	16680.5	20101.1
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	IAVMSFPAEGVESAIK	IAVMSFPAEGVESAIK	2	IAVMSFPAEGVESAIK2	88417	115914	100330
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	IAVQTEKPENK	IAVQTEKPENK	3	IAVQTEKPENK3	46333	48913.2	51728.5
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	IAVSIEDEANK	IAVSIEDEANK	2	IAVSIEDEANK2	4053.4	2170.4	3395.2
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	IAVSIEDEANKDLPPAALLYR	IAVSIEDEANKDLPPAALLYR	3	IAVSIEDEANKDLPPAALLYR3	17404.3	19438.8	10799.4
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	IAVSNIVTQPPQPGAIGK	IAVSNIVTQPPQPGAIGK	2	IAVSNIVTQPPQPGAIGK2	28198.8	21191.5	26607.4
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	IAVSNIVTQPPQPGAIGK	IAVSNIVTQPPQPGAIGK	3	IAVSNIVTQPPQPGAIGK3	28200.7	34693.7	35982.1
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	IAVVGEGR	IAVVGEGR	2	IAVVGEGR2	673466	612307	611841
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	IAVYDDNNK	IAVYDDNNK	2	IAVYDDNNK2	15461.5	21261.8	9727.3
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	IAVYSCPFDGMITETK	IAVYSC(UniMod:4)PFDGMITETK	2	IAVYSC(UniMod:4)PFDGMITETK2	90013.5	98130.6	70825.9
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	IAVYSCPFDGMITETK	IAVYSC(UniMod:4)PFDGMITETK	3	IAVYSC(UniMod:4)PFDGMITETK3	8151.98	11096.2	17277.2
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	IAWECPEK	IAWEC(UniMod:4)PEK	2	IAWEC(UniMod:4)PEK2	804040	797726	869794
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	IAWESPQGQVSR	IAWESPQGQVSR	2	IAWESPQGQVSR2	1.65165e+06	1.89142e+06	1.82386e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	IAWESPQGQVSR	IAWESPQGQVSR	3	IAWESPQGQVSR3	11359.1	15693.7	15286.6
Q9EQV9	Q9EQV9	CBPB2_RAT	Cpb2	Carboxypeptidase B2	1	IAWHVIR	IAWHVIR	2	IAWHVIR2	33506.5	26694.2	13791.3
A2RUW1	A2RUW1	TOLIP_RAT	Tollip	Toll-interacting protein	1	IAWTHITIPESLK	IAWTHITIPESLK	2	IAWTHITIPESLK2	3595.11		9677.13
A2RUW1	A2RUW1	TOLIP_RAT	Tollip	Toll-interacting protein	1	IAWTHITIPESLK	IAWTHITIPESLK	3	IAWTHITIPESLK3	83471	75537.1	61149.2
Q920E1	Q920E1	PAR3_RAT	F2rl2	Proteinase-activated receptor 3	1	IAYHLNGNDWVFGEVMCR	IAYHLNGNDWVFGEVMC(UniMod:4)R	3	IAYHLNGNDWVFGEVMC(UniMod:4)R3	13288.3	9374.81	6198.7
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	IAYIHLVADYR	IAYIHLVADYR	2	IAYIHLVADYR2	2820.91	4931.22	
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	IAYIHLVADYR	IAYIHLVADYR	3	IAYIHLVADYR3	17269.3	22247.7	18645.2
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	IAYMLVVHGR	IAYMLVVHGR	2	IAYMLVVHGR2	7365.85	6335.07	3065.31
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	IAYMLVVHGR	IAYMLVVHGR	3	IAYMLVVHGR3	53837.3	75741.7	65499.3
A0A8J8YNE4	A0A8J8YNE4	A0A8J8YNE4_RAT	Apool	MICOS complex subunit	1	IAYPLGLATLGATVCYPAQSVIIAK	IAYPLGLATLGATVC(UniMod:4)YPAQSVIIAK	3	IAYPLGLATLGATVC(UniMod:4)YPAQSVIIAK3	15271.4	13136.1	15827.9
D3ZRJ7	D3ZRJ7	D3ZRJ7_RAT	Lrrk1	non-specific serine/threonine protein kinase	1	IAYQIASGLAYLHK	IAYQIASGLAYLHK	3	IAYQIASGLAYLHK3		3895.7	
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	IAYQLAVEAESEQK	IAYQLAVEAESEQK	2	IAYQLAVEAESEQK2	33585.6	31017.2	27797.3
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	IAYQLAVEAESEQK	IAYQLAVEAESEQK	3	IAYQLAVEAESEQK3	8216.99	3656.76	8140.6
Q924S5	A0A8I6B3S7;Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	0	IAYTFAR	IAYTFAR	2	IAYTFAR2	190336	185438	185330
Q66HG5	Q66HG5	TM9S2_RAT	Tm9sf2	Transmembrane 9 superfamily member 2	1	IAYTYSISFEEEK	IAYTYSISFEEEK	2	IAYTYSISFEEEK2	9568.06	7689.22	5439.77
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	IAYVSQQPWVFSGTVR	IAYVSQQPWVFSGTVR	2	IAYVSQQPWVFSGTVR2	41882.2	41682.8	40046.1
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	IAYVSQQPWVFSGTVR	IAYVSQQPWVFSGTVR	3	IAYVSQQPWVFSGTVR3	15443.9	7294.54	11252.9
D4ADE5	D4ADE5	D4ADE5_RAT	Setd7	Histone-lysine N-methyltransferase SETD7	1	IAYVYPDQR	IAYVYPDQR	2	IAYVYPDQR2	15296	16701.8	12103.6
Q5BJP5	Q5BJP5	TM230_RAT	Tmem230	Transmembrane protein 230	1	IAYYASK	IAYYASK	2	IAYYASK2	58926.2		92068.8
Q8K4S7	A0A8I6G3R2;Q8K4S7	CBLB_RAT	Cblb	E3 ubiquitin-protein ligase CBL-B	0	ICAENDKDVK	IC(UniMod:4)AENDKDVK	2	IC(UniMod:4)AENDKDVK2			3536.42
Q8K4S7	A0A8I6G3R2;Q8K4S7	CBLB_RAT	Cblb	E3 ubiquitin-protein ligase CBL-B	0	ICAENDKDVK	IC(UniMod:4)AENDKDVK	3	IC(UniMod:4)AENDKDVK3			54062.5
Q2QDE7	Q2QDE7	DNSL1_RAT	Dnase1l1	Deoxyribonuclease-1-like 1	1	ICAFNAHR	IC(UniMod:4)AFNAHR	2	IC(UniMod:4)AFNAHR2	4424.73	5450.68	5181.6
A0A8I5ZTU5	A0A8I5ZTU5	A0A8I5ZTU5_RAT	Ranbp1	RAN binding protein 1	1	ICANHYITPMMELKPNAGSDR	IC(UniMod:4)ANHYITPMMELKPNAGSDR	4	IC(UniMod:4)ANHYITPMMELKPNAGSDR4	67217.1	81003.2	68643.6
Q62632	Q62632	FSTL1_RAT	Fstl1	Follistatin-related protein 1	1	ICANVFCGAGR	IC(UniMod:4)ANVFC(UniMod:4)GAGR	2	IC(UniMod:4)ANVFC(UniMod:4)GAGR2	51063.6	39831.4	43394.6
D3ZCG1	D3ZCG1	D3ZCG1_RAT	Dipk2b	Divergent protein kinase domain 2B	1	ICASASGPK	IC(UniMod:4)ASASGPK	2	IC(UniMod:4)ASASGPK2		17189.2	
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	ICAVGITK	IC(UniMod:4)AVGITK	2	IC(UniMod:4)AVGITK2	36065.7	40624.2	30635
Q5QJC9	Q5QJC9	BAG5_RAT	Bag5	BAG family molecular chaperone regulator 5	1	ICAVQEIIEDCVR	IC(UniMod:4)AVQEIIEDC(UniMod:4)VR	2	IC(UniMod:4)AVQEIIEDC(UniMod:4)VR2		5543.01	3578.58
P07633	P07633	PCCB_RAT	Pccb	Propionyl-CoA carboxylase beta chain, mitochondrial	1	ICCDLEVLASK	IC(UniMod:4)C(UniMod:4)DLEVLASK	2	IC(UniMod:4)C(UniMod:4)DLEVLASK2	15455.2	14663.1	10542.5
P28494	A0A0G2JWG1;P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	0	ICCQFDFK	IC(UniMod:4)C(UniMod:4)QFDFK	2	IC(UniMod:4)C(UniMod:4)QFDFK2	73318.8	67701.4	71025.2
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	ICDDELILIK	IC(UniMod:4)DDELILIK	2	IC(UniMod:4)DDELILIK2	186928	202310	202971
D3ZAP9	D3ZAP9	D3ZAP9_RAT	Gpd1l1	Glycerol-3-phosphate dehydrogenase [NAD(+)]	1	ICDEITGR	IC(UniMod:4)DEITGR	2	IC(UniMod:4)DEITGR2	25970.7	21119.9	15248.6
A0A0G2K9K2	A0A8I5Y652;A0A0G2K598;A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	0	ICDELIAK	IC(UniMod:4)DELIAK	2	IC(UniMod:4)DELIAK2	118552	120769	94531.1
B1WBV4	B1WBV4	B1WBV4_RAT	Plekhf2	Pleckstrin homology and FYVE domain containing 2	1	ICDFCYDLLSTGDMAACQPTR	IC(UniMod:4)DFC(UniMod:4)YDLLSTGDMAAC(UniMod:4)QPTR	3	IC(UniMod:4)DFC(UniMod:4)YDLLSTGDMAAC(UniMod:4)QPTR3	11056.8	18886.4	11170.9
Q4G050	Q4G050	MKNK1_RAT	Mknk1	MAP kinase-interacting serine/threonine-protein kinase 1	1	ICDFDLGSGVK	IC(UniMod:4)DFDLGSGVK	2	IC(UniMod:4)DFDLGSGVK2	16927.1	22147.6	20182.7
D3Z8E0	Q63531;A0A8I6AQN6;F1M7N7;D3Z8E0	D3Z8E0_RAT	Rps6ka3	Ribosomal protein S6 kinase	0	ICDFGFAK	IC(UniMod:4)DFGFAK	2	IC(UniMod:4)DFGFAK2	12509	16168.8	
Q91ZT1	D3ZSZ3;A0A8I6AJX5;Q05030;A0A0G2JW59;P53767;Q63116;P20786;Q91ZT1;P21708;P63086;O08775	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	0	ICDFGLAR	IC(UniMod:4)DFGLAR	2	IC(UniMod:4)DFGLAR2	297040	293116	255302
P0C8E4	P0C8E4	M3K7_RAT	Map3k7	Mitogen-activated protein kinase kinase kinase 7	1	ICDFGTACDIQTHMTNNK	IC(UniMod:4)DFGTAC(UniMod:4)DIQTHMTNNK	3	IC(UniMod:4)DFGTAC(UniMod:4)DIQTHMTNNK3	15550.4	8615.35	7749.12
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	ICDFSNASKPK	IC(UniMod:4)DFSNASKPK	2	IC(UniMod:4)DFSNASKPK2	13198.4	5489.3	5901.02
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	ICDFSNASKPK	IC(UniMod:4)DFSNASKPK	3	IC(UniMod:4)DFSNASKPK3	113373	57195.7	90082.1
P54645	P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	1	ICDGIFYTPQYLNPSVISLLK	IC(UniMod:4)DGIFYTPQYLNPSVISLLK	3	IC(UniMod:4)DGIFYTPQYLNPSVISLLK3	1972.84		
Q6AXV4	Q6AXV4	SAM50_RAT	Samm50	Sorting and assembly machinery component 50 homolog	1	ICDGVQFGAGIR	IC(UniMod:4)DGVQFGAGIR	2	IC(UniMod:4)DGVQFGAGIR2	51042.8	51752.6	48856.2
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	ICDIAAELAR	IC(UniMod:4)DIAAELAR	2	IC(UniMod:4)DIAAELAR2	49661.8	34053.3	49254.2
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	ICDKPVR	IC(UniMod:4)DKPVR	2	IC(UniMod:4)DKPVR2			3351.44
P11730	P11730	KCC2G_RAT	Camk2g	Calcium/calmodulin-dependent protein kinase type II subunit gamma	1	ICDPGLTSFEPEALGNLVEGMDFHK	IC(UniMod:4)DPGLTSFEPEALGNLVEGMDFHK	3	IC(UniMod:4)DPGLTSFEPEALGNLVEGMDFHK3	15453.3	29507.7	16087.9
P13444	P13444	METK1_RAT	Mat1a	S-adenosylmethionine synthase isoform type-1	1	ICDQISDAVLDAHLK	IC(UniMod:4)DQISDAVLDAHLK	3	IC(UniMod:4)DQISDAVLDAHLK3	5248.52	1396.35	2755.91
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	ICDQWDNLGALTQK	IC(UniMod:4)DQWDNLGALTQK	2	IC(UniMod:4)DQWDNLGALTQK2	6864.85	9113.66	5633.51
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	ICDQWDNLGALTQK	IC(UniMod:4)DQWDNLGALTQK	3	IC(UniMod:4)DQWDNLGALTQK3	486901	572452	612506
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	ICDQWDNLGSLTHSR	IC(UniMod:4)DQWDNLGSLTHSR	2	IC(UniMod:4)DQWDNLGSLTHSR2	45522.5	41383.5	39051.3
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	ICDQWDNLGSLTHSR	IC(UniMod:4)DQWDNLGSLTHSR	3	IC(UniMod:4)DQWDNLGSLTHSR3	421399	384097	427092
D3ZWA8	D3ZWA8	D3ZWA8_RAT	Appl1	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1	1	ICDSVGLAK	IC(UniMod:4)DSVGLAK	2	IC(UniMod:4)DSVGLAK2	60803.3	33989.3	33395.2
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	ICEDEIPPPVALGK	IC(UniMod:4)EDEIPPPVALGK	2	IC(UniMod:4)EDEIPPPVALGK2	62794.9	65141.2	48803.9
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	ICEDEIPPPVALGK	IC(UniMod:4)EDEIPPPVALGK	3	IC(UniMod:4)EDEIPPPVALGK3	4805.03	3453.75	
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	ICEDSAEILDSDVLDRPLNIMIPK	IC(UniMod:4)EDSAEILDSDVLDRPLNIMIPK	3	IC(UniMod:4)EDSAEILDSDVLDRPLNIMIPK3	35266.6	32747.2	26975.6
D3ZER6	D3ZER6	D3ZER6_RAT	Tnpo2	Transportin 2	1	ICEDSSELLDSDALNRPLNIMIPK	IC(UniMod:4)EDSSELLDSDALNRPLNIMIPK	3	IC(UniMod:4)EDSSELLDSDALNRPLNIMIPK3	19803.7	31352.2	23092.4
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	ICEEAFTR	IC(UniMod:4)EEAFTR	2	IC(UniMod:4)EEAFTR2	220020	182252	242908
Q66HG9	Q66HG9	MAVS_RAT	Mavs	Mitochondrial antiviral-signaling protein	1	ICELPGLAEQVTR	IC(UniMod:4)ELPGLAEQVTR	2	IC(UniMod:4)ELPGLAEQVTR2	100339	92053.2	107586
Q66HG9	Q66HG9	MAVS_RAT	Mavs	Mitochondrial antiviral-signaling protein	1	ICELPGLAEQVTR	IC(UniMod:4)ELPGLAEQVTR	3	IC(UniMod:4)ELPGLAEQVTR3	20689.5	19744.9	21706
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	ICEMAAYFTHSNLQPVHMILVLR	IC(UniMod:4)EMAAYFTHSNLQPVHMILVLR	4	IC(UniMod:4)EMAAYFTHSNLQPVHMILVLR4	6266.49	6178.88	2334.52
Q5FWT9	Q5FWT9	SIKE1_RAT	Sike1	Suppressor of IKBKE 1	1	ICEMGAVMR	IC(UniMod:4)EMGAVMR	2	IC(UniMod:4)EMGAVMR2	50898.4	48419.1	41526.6
Q63313	Q63313	LBP_RAT	Lbp	Lipopolysaccharide-binding protein	1	ICEMIQK	IC(UniMod:4)EMIQK	2	IC(UniMod:4)EMIQK2	75503.1	62687.6	53545.7
O70367	O70367	CNMD_RAT	Cnmd	Leukocyte cell-derived chemotaxin 1	1	ICEPLGGYYPWPYNYQGCR	IC(UniMod:4)EPLGGYYPWPYNYQGC(UniMod:4)R	3	IC(UniMod:4)EPLGGYYPWPYNYQGC(UniMod:4)R3	2332.02		1823.54
A0A8I6AE36	A0A8I6AE36;Q9QYU1	A0A8I6AE36_RAT	ENSRNOG00000067472	Peroxisomal biogenesis factor 19	0	ICEQFEAETPTDSEATHR	IC(UniMod:4)EQFEAETPTDSEATHR	3	IC(UniMod:4)EQFEAETPTDSEATHR3	20479.1	21126.3	15625.6
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	ICEVINEAVWK	IC(UniMod:4)EVINEAVWK	2	IC(UniMod:4)EVINEAVWK2	87322.8	84677.4	65941.3
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	ICEVRPCGQPVYSSLK	IC(UniMod:4)EVRPC(UniMod:4)GQPVYSSLK	2	IC(UniMod:4)EVRPC(UniMod:4)GQPVYSSLK2	2195.53		1376.07
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	ICEVRPCGQPVYSSLK	IC(UniMod:4)EVRPC(UniMod:4)GQPVYSSLK	3	IC(UniMod:4)EVRPC(UniMod:4)GQPVYSSLK3	209625	171624	202604
F7ESI5	F7ESI5	F7ESI5_RAT	Cfhr1	Complement factor H-related 1	1	ICFFPSVENGHSTSSGQTHK	IC(UniMod:4)FFPSVENGHSTSSGQTHK	3	IC(UniMod:4)FFPSVENGHSTSSGQTHK3	8063.18		
F7ESI5	F7ESI5	F7ESI5_RAT	Cfhr1	Complement factor H-related 1	1	ICFFPSVENGHSTSSGQTHK	IC(UniMod:4)FFPSVENGHSTSSGQTHK	4	IC(UniMod:4)FFPSVENGHSTSSGQTHK4	23884.2	23605.8	15778.7
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	ICFLMAHDALNAPLHILR	IC(UniMod:4)FLMAHDALNAPLHILR	3	IC(UniMod:4)FLMAHDALNAPLHILR3	3650.58		9986.25
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	ICFLMAHDALNAPLHILR	IC(UniMod:4)FLMAHDALNAPLHILR	4	IC(UniMod:4)FLMAHDALNAPLHILR4	13143.1	7860.91	11536
P70645	P70645	BLMH_RAT	Blmh	Bleomycin hydrolase	1	ICFVNDPRPQHK	IC(UniMod:4)FVNDPRPQHK	3	IC(UniMod:4)FVNDPRPQHK3	22776.5	24663.9	21990.4
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	ICFYHHFSVVER	IC(UniMod:4)FYHHFSVVER	3	IC(UniMod:4)FYHHFSVVER3	25286.9	21813.7	32588.1
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	ICFYHHFSVVER	IC(UniMod:4)FYHHFSVVER	4	IC(UniMod:4)FYHHFSVVER4	20027.5	19341.8	17198
P62142	D3ZJU8;P62142	PP1B_RAT	Ppp1cb	Serine/threonine-protein phosphatase PP1-beta catalytic subunit	0	ICGDIHGQYTDLLR	IC(UniMod:4)GDIHGQYTDLLR	2	IC(UniMod:4)GDIHGQYTDLLR2	4648.98	3714.86	2602.98
P62142	D3ZJU8;P62142	PP1B_RAT	Ppp1cb	Serine/threonine-protein phosphatase PP1-beta catalytic subunit	0	ICGDIHGQYTDLLR	IC(UniMod:4)GDIHGQYTDLLR	3	IC(UniMod:4)GDIHGQYTDLLR3	214889	224759	168208
P62138	P62138;P63088	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	0	ICGDIHGQYYDLLR	IC(UniMod:4)GDIHGQYYDLLR	2	IC(UniMod:4)GDIHGQYYDLLR2	54051	48057.5	35570.1
P62138	P62138;P63088	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	0	ICGDIHGQYYDLLR	IC(UniMod:4)GDIHGQYYDLLR	3	IC(UniMod:4)GDIHGQYYDLLR3	299043	286788	265004
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	ICGFLDIEDNENSGK	IC(UniMod:4)GFLDIEDNENSGK	2	IC(UniMod:4)GFLDIEDNENSGK2	12110.2	11968	14566.7
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	ICGGWQMEEADDWLR	IC(UniMod:4)GGWQMEEADDWLR	2	IC(UniMod:4)GGWQMEEADDWLR2	4085.14	2388.82	7288.65
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	ICGNLSK	IC(UniMod:4)GNLSK	1	IC(UniMod:4)GNLSK1	9583.15	8698.68	5752.24
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	ICGNLSK	IC(UniMod:4)GNLSK	2	IC(UniMod:4)GNLSK2	2.19036e+06	1.69349e+06	1.69846e+06
Q5M7T2	Q5M7T2	SPRY7_RAT	Spryd7	SPRY domain-containing protein 7	1	ICGTGGCLASAPLHQNK	IC(UniMod:4)GTGGC(UniMod:4)LASAPLHQNK	3	IC(UniMod:4)GTGGC(UniMod:4)LASAPLHQNK3	46376.2	42429.7	35677.5
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	ICHCFSK	IC(UniMod:4)HC(UniMod:4)FSK	2	IC(UniMod:4)HC(UniMod:4)FSK2	4080.34	5484.49	
A0A0G2JTG3	A0A0G2JTG3	A0A0G2JTG3_RAT	Susd1	Sushi domain containing 1	1	ICICNYGFWGNGR	IC(UniMod:4)IC(UniMod:4)NYGFWGNGR	2	IC(UniMod:4)IC(UniMod:4)NYGFWGNGR2	9621.26	6270	
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	ICIVGPNGVGK	IC(UniMod:4)IVGPNGVGK	2	IC(UniMod:4)IVGPNGVGK2	80557.5	92187.7	72544.1
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	ICIWDVSK	IC(UniMod:4)IWDVSK	2	IC(UniMod:4)IWDVSK2	22961.5	35402.9	33563.6
Q496Z0	Q496Z0	ELP2_RAT	Elp2	Elongator complex protein 2	1	ICIYSWSK	IC(UniMod:4)IYSWSK	2	IC(UniMod:4)IYSWSK2	13924.4	12144	10013.4
O35264	O35264	PA1B2_RAT	Pafah1b2	Platelet-activating factor acetylhydrolase IB subunit alpha2	1	ICKPLHELIMQLLEETPEEK	IC(UniMod:4)KPLHELIMQLLEETPEEK	3	IC(UniMod:4)KPLHELIMQLLEETPEEK3	23762.2	7697.17	14109.6
O35264	O35264	PA1B2_RAT	Pafah1b2	Platelet-activating factor acetylhydrolase IB subunit alpha2	1	ICKPLHELIMQLLEETPEEK	IC(UniMod:4)KPLHELIMQLLEETPEEK	4	IC(UniMod:4)KPLHELIMQLLEETPEEK4	5395.79	3953.82	13419.5
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	ICKPLHIQEVR	IC(UniMod:4)KPLHIQEVR	3	IC(UniMod:4)KPLHIQEVR3	20235.3	24631.3	17319.8
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	ICLAHEFAEK	IC(UniMod:4)LAHEFAEK	2	IC(UniMod:4)LAHEFAEK2	9404.02	9962.71	2050.25
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	ICLAHEFAEK	IC(UniMod:4)LAHEFAEK	3	IC(UniMod:4)LAHEFAEK3	67881.8	86384.3	60763.9
Q9EQX9	Q9EQX9;G3V6M7	UBE2N_RAT	Ube2n	Ubiquitin-conjugating enzyme E2 N	0	ICLDILK	IC(UniMod:4)LDILK	2	IC(UniMod:4)LDILK2	41505.2	32005.8	40454.1
P06765	P06765	PLF4_RAT	Pf4	Platelet factor 4	1	ICLDRQVPLYK	IC(UniMod:4)LDRQVPLYK	3	IC(UniMod:4)LDRQVPLYK3	7059.18		34514.9
P06765	P06765	PLF4_RAT	Pf4	Platelet factor 4	1	ICLDRQVPLYKK	IC(UniMod:4)LDRQVPLYKK	4	IC(UniMod:4)LDRQVPLYKK4	8462.52	7474.96	14445.9
E9PU10	E9PU10	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	1	ICLEALK	IC(UniMod:4)LEALK	2	IC(UniMod:4)LEALK2	131392	117555	130808
Q810F4	Q810F4	FAM3C_RAT	Fam3c	Protein FAM3C	1	ICLEDNVLMSGVK	IC(UniMod:4)LEDNVLMSGVK	2	IC(UniMod:4)LEDNVLMSGVK2	27227.8	30296.1	25084.4
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	ICLEIMQR	IC(UniMod:4)LEIMQR	2	IC(UniMod:4)LEIMQR2	15347.8	8705.81	4967.43
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	ICLEQLHTPK	IC(UniMod:4)LEQLHTPK	3	IC(UniMod:4)LEQLHTPK3	29417	15511.1	24914.1
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	ICLHLYHLNETVTVTASLISQR	IC(UniMod:4)LHLYHLNETVTVTASLISQR	3	IC(UniMod:4)LHLYHLNETVTVTASLISQR3	78919.1	67412.1	58143.4
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	ICLHLYHLNETVTVTASLISQR	IC(UniMod:4)LHLYHLNETVTVTASLISQR	4	IC(UniMod:4)LHLYHLNETVTVTASLISQR4	242688	249942	248795
A0A8J8XTW6	A0A8J8XTW6	A0A8J8XTW6_RAT	Vps9d1	VPS9 domain containing 1	1	ICLKPAIPAAPPVPLPSR	IC(UniMod:4)LKPAIPAAPPVPLPSR	3	IC(UniMod:4)LKPAIPAAPPVPLPSR3	6156.75		10488.8
B4F7E7	B4F7E7	PALS1_RAT	Pals1	Protein PALS1	1	ICLLSLR	IC(UniMod:4)LLSLR	2	IC(UniMod:4)LLSLR2	27642.3	28140.2	29213.4
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	ICLQPPPSSR	IC(UniMod:4)LQPPPSSR	2	IC(UniMod:4)LQPPPSSR2	128907	113998	130293
A0A8I5ZP57	A0A8I5ZP57	A0A8I5ZP57_RAT	Pkdcc	Protein kinase domain containing, cytoplasmic	1	ICLSLGR	IC(UniMod:4)LSLGR	2	IC(UniMod:4)LSLGR2	40206.4	29389.1	27732.3
Q6BBI8	Q6BBI8	UFC1_RAT	Ufc1	Ubiquitin-fold modifier-conjugating enzyme 1	1	ICLTDHFKPLWAR	IC(UniMod:4)LTDHFKPLWAR	3	IC(UniMod:4)LTDHFKPLWAR3	15165.2	13020.6	27186.1
Q6BBI8	Q6BBI8	UFC1_RAT	Ufc1	Ubiquitin-fold modifier-conjugating enzyme 1	1	ICLTDHFKPLWAR	IC(UniMod:4)LTDHFKPLWAR	4	IC(UniMod:4)LTDHFKPLWAR4	16146.5	18518.4	8855.99
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	ICMNEDPAK	IC(UniMod:4)MNEDPAK	2	IC(UniMod:4)MNEDPAK2	1.2093e+06	1.17014e+06	1.19296e+06
A0A8I6A182	A0A8I6A182	A0A8I6A182_RAT	Pitpnc1	Phosphatidylinositol transfer protein, cytoplasmic 1	1	ICMPLTVDEYK	IC(UniMod:4)MPLTVDEYK	2	IC(UniMod:4)MPLTVDEYK2	80847.7	78262.9	89560.6
Q9R010	Q9R010	CIB1_RAT	Cib1	Calcium and integrin-binding protein 1	1	ICMVFSTSPTR	IC(UniMod:4)MVFSTSPTR	2	IC(UniMod:4)MVFSTSPTR2	55014.3	49110.7	48790.4
D4A1Y5	D4A1Y5	D4A1Y5_RAT	Mthfd2	methenyltetrahydrofolate cyclohydrolase	1	ICNAVSPDKDVDGFHVINVGR	IC(UniMod:4)NAVSPDKDVDGFHVINVGR	3	IC(UniMod:4)NAVSPDKDVDGFHVINVGR3	11488.6	12477	9917.76
D4A1Y5	D4A1Y5	D4A1Y5_RAT	Mthfd2	methenyltetrahydrofolate cyclohydrolase	1	ICNAVSPDKDVDGFHVINVGR	IC(UniMod:4)NAVSPDKDVDGFHVINVGR	4	IC(UniMod:4)NAVSPDKDVDGFHVINVGR4	35581.5	41679	32165.9
Q8VHI8	Q8VHI8	SEC20_RAT	Bnip1	Vesicle transport protein SEC20	1	ICNQEIVK	IC(UniMod:4)NQEIVK	2	IC(UniMod:4)NQEIVK2	21536.4	17023.4	11087
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	ICNQVLVCER	IC(UniMod:4)NQVLVC(UniMod:4)ER	2	IC(UniMod:4)NQVLVC(UniMod:4)ER2	76577.2	62560.9	78160.3
Q5XIB4	Q5XIB4	UFSP2_RAT	Ufsp2	Ufm1-specific protease 2	1	ICNSSVYLWPNSDANTGELTDSSACK	IC(UniMod:4)NSSVYLWPNSDANTGELTDSSAC(UniMod:4)K	3	IC(UniMod:4)NSSVYLWPNSDANTGELTDSSAC(UniMod:4)K3	8863.57		3082.89
Q5U2Z4	Q5U2Z4	Q5U2Z4_RAT	Nfkb2	Nuclear factor kappa B subunit 2	1	ICNYEGPAK	IC(UniMod:4)NYEGPAK	2	IC(UniMod:4)NYEGPAK2	6305.45		4967.25
Q63369	Q63369	NFKB1_RAT	Nfkb1	Nuclear factor NF-kappa-B p105 subunit	1	ICNYVGPAK	IC(UniMod:4)NYVGPAK	2	IC(UniMod:4)NYVGPAK2	14562.8	19420.3	25760.7
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	ICPHGPGYATDGR	IC(UniMod:4)PHGPGYATDGR	3	IC(UniMod:4)PHGPGYATDGR3	4893.48		1899.4
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	ICPLPGTALK	IC(UniMod:4)PLPGTALK	2	IC(UniMod:4)PLPGTALK2	848886	924973	959265
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	ICPNDVCR	IC(UniMod:4)PNDVC(UniMod:4)R	2	IC(UniMod:4)PNDVC(UniMod:4)R2	148386	137488	128001
P35053	P35053	GPC1_RAT	Gpc1	Glypican-1	1	ICPQGYTCCTSEMEENLANHSR	IC(UniMod:4)PQGYTC(UniMod:4)C(UniMod:4)TSEMEENLANHSR	3	IC(UniMod:4)PQGYTC(UniMod:4)C(UniMod:4)TSEMEENLANHSR3	6345.79	9015.37	4501.8
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	ICPTPNNQFMMGGR	IC(UniMod:4)PTPNNQFMMGGR	2	IC(UniMod:4)PTPNNQFMMGGR2	28473	24474.7	33382.7
Q5RK08	Q5RK08	Q5RK08_RAT	Nipsnap2	Glioblastoma amplified sequence	1	ICQEVLPK	IC(UniMod:4)QEVLPK	2	IC(UniMod:4)QEVLPK2	81533.9	86648.3	96703.9
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	ICQGCPHR	IC(UniMod:4)QGC(UniMod:4)PHR	2	IC(UniMod:4)QGC(UniMod:4)PHR2			1895.27
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	ICQGCPHRYECEESFTTLNVDIR	IC(UniMod:4)QGC(UniMod:4)PHRYEC(UniMod:4)EESFTTLNVDIR	4	IC(UniMod:4)QGC(UniMod:4)PHRYEC(UniMod:4)EESFTTLNVDIR4	4658.65	5880.64	5971.03
P81827	P81827	UP1_RAT		Urinary protein 1	1	ICQTYPDEICAWVVVTTR	IC(UniMod:4)QTYPDEIC(UniMod:4)AWVVVTTR	3	IC(UniMod:4)QTYPDEIC(UniMod:4)AWVVVTTR3	27216.7	16656.8	18742.4
A0A8I6A3B1	A0A8I6A3B1	A0A8I6A3B1_RAT	Ncoa4	Nuclear receptor coactivator 4	1	ICSDAWGNLK	IC(UniMod:4)SDAWGNLK	2	IC(UniMod:4)SDAWGNLK2	4904.83	7507.8	4468.48
Q9QWE9	Q9QWE9	GGT5_RAT	Ggt5	Glutathione hydrolase 5 proenzyme	1	ICSDIGR	IC(UniMod:4)SDIGR	2	IC(UniMod:4)SDIGR2	83404	68039.3	80132.3
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	ICSEVLQLEPDNVNALK	IC(UniMod:4)SEVLQLEPDNVNALK	2	IC(UniMod:4)SEVLQLEPDNVNALK2	31656.7	23296.6	14579
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	ICSEVLQLEPDNVNALK	IC(UniMod:4)SEVLQLEPDNVNALK	3	IC(UniMod:4)SEVLQLEPDNVNALK3	31474	28740.2	21350.5
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	ICSEVLQLEPDNVNALKDR	IC(UniMod:4)SEVLQLEPDNVNALKDR	3	IC(UniMod:4)SEVLQLEPDNVNALKDR3	26271.2	28888	34248.1
P20651	P20651;A0A8I5ZNS7	PP2BB_RAT	Ppp3cb	Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform	0	ICSFEEAK	IC(UniMod:4)SFEEAK	2	IC(UniMod:4)SFEEAK2	21290.3	21852.6	29947.1
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	ICSGGSAVVCR	IC(UniMod:4)SGGSAVVC(UniMod:4)R	2	IC(UniMod:4)SGGSAVVC(UniMod:4)R2	394740	359247	315795
Q5XI59	Q5XI59	RNF10_RAT	Rnf10	E3 ubiquitin-protein ligase RNF10	1	ICSHEVPSCPICLYPPTAAK	IC(UniMod:4)SHEVPSC(UniMod:4)PIC(UniMod:4)LYPPTAAK	3	IC(UniMod:4)SHEVPSC(UniMod:4)PIC(UniMod:4)LYPPTAAK3		12927.8	16522.6
Q5U2N0	Q5U2N0	PYRG2_RAT	Ctps2	CTP synthase 2	1	ICSIALVGK	IC(UniMod:4)SIALVGK	2	IC(UniMod:4)SIALVGK2	12940.4	4487.36	13269
F1LR42	F1LR42	F1LR42_RAT	Rufy1	RUN and FYVE domain containing 1	1	ICSLQEEQQQLR	IC(UniMod:4)SLQEEQQQLR	2	IC(UniMod:4)SLQEEQQQLR2	6614.5	7323.89	5294.35
Q642B0	Q642B0	Q642B0_RAT	Gpc4	Glypican 4	1	ICSQDYTCCSQEMEEK	IC(UniMod:4)SQDYTC(UniMod:4)C(UniMod:4)SQEMEEK	3	IC(UniMod:4)SQDYTC(UniMod:4)C(UniMod:4)SQEMEEK3	3898.82	5258.19	7996.58
Q62871	Q62871	DC1I2_RAT	Dync1i2	Cytoplasmic dynein 1 intermediate chain 2	1	ICSWSLDMLSHPQDSMELVHK	IC(UniMod:4)SWSLDMLSHPQDSMELVHK	3	IC(UniMod:4)SWSLDMLSHPQDSMELVHK3	26044.6	25051.3	22073.4
Q62871	Q62871	DC1I2_RAT	Dync1i2	Cytoplasmic dynein 1 intermediate chain 2	1	ICSWSLDMLSHPQDSMELVHK	IC(UniMod:4)SWSLDMLSHPQDSMELVHK	4	IC(UniMod:4)SWSLDMLSHPQDSMELVHK4	102582	119035	129878
F1M471	F1M471	F1M471_RAT	Epm2aip1	EPM2A interacting protein 1	1	ICTFEDK	IC(UniMod:4)TFEDK	2	IC(UniMod:4)TFEDK2	8008.12	10079.8	
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	ICTFPEK	IC(UniMod:4)TFPEK	2	IC(UniMod:4)TFPEK2	18853.1	31082.4	19652.1
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	ICTTHQDPLLSK	IC(UniMod:4)TTHQDPLLSK	2	IC(UniMod:4)TTHQDPLLSK2	9275.49	8162.64	13001.1
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	ICTTHQDPLLSK	IC(UniMod:4)TTHQDPLLSK	3	IC(UniMod:4)TTHQDPLLSK3	222585	230837	167275
D3Z8L7	D3Z8L7	RRAS_RAT	Rras	Ras-related protein R-Ras	1	ICTVDGIPAR	IC(UniMod:4)TVDGIPAR	2	IC(UniMod:4)TVDGIPAR2	293548	295162	305814
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	ICVAIDECGLDTR	IC(UniMod:4)VAIDEC(UniMod:4)GLDTR	2	IC(UniMod:4)VAIDEC(UniMod:4)GLDTR2	4838.64	4296.8	
P36970	P36970	GPX4_RAT	Gpx4	Phospholipid hydroperoxide glutathione peroxidase	1	ICVNGDDAHPLWK	IC(UniMod:4)VNGDDAHPLWK	2	IC(UniMod:4)VNGDDAHPLWK2	5016.78	10015.4	
P36970	P36970	GPX4_RAT	Gpx4	Phospholipid hydroperoxide glutathione peroxidase	1	ICVNGDDAHPLWK	IC(UniMod:4)VNGDDAHPLWK	3	IC(UniMod:4)VNGDDAHPLWK3	63526.1	59661.9	61817.6
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	ICVSSCPPGHFHADK	IC(UniMod:4)VSSC(UniMod:4)PPGHFHADK	2	IC(UniMod:4)VSSC(UniMod:4)PPGHFHADK2	1425.64		3242.94
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	ICVSSCPPGHFHADK	IC(UniMod:4)VSSC(UniMod:4)PPGHFHADK	3	IC(UniMod:4)VSSC(UniMod:4)PPGHFHADK3	50729.5	52282.9	27613.5
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	ICVSSCPPGHFHADK	IC(UniMod:4)VSSC(UniMod:4)PPGHFHADK	4	IC(UniMod:4)VSSC(UniMod:4)PPGHFHADK4	117992	128689	109943
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	ICVSSCPPGHFHADKK	IC(UniMod:4)VSSC(UniMod:4)PPGHFHADKK	3	IC(UniMod:4)VSSC(UniMod:4)PPGHFHADKK3	17763.4	18207	19534.5
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	ICVSSCPPGHFHADKK	IC(UniMod:4)VSSC(UniMod:4)PPGHFHADKK	4	IC(UniMod:4)VSSC(UniMod:4)PPGHFHADKK4	140817	161468	156362
Q66H39	Q66H39	ABCF3_RAT	Abcf3	ATP-binding cassette sub-family F member 3	1	ICVVGENGAGK	IC(UniMod:4)VVGENGAGK	2	IC(UniMod:4)VVGENGAGK2	995.741	6037.33	
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	ICWQAAIFK	IC(UniMod:4)WQAAIFK	2	IC(UniMod:4)WQAAIFK2	17448.1	15434.3	12114.3
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	ICYEEDEHILGVVGGTLK	IC(UniMod:4)YEEDEHILGVVGGTLK	3	IC(UniMod:4)YEEDEHILGVVGGTLK3	133704	115331	118513
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	ICYIFHETFGR	IC(UniMod:4)YIFHETFGR	2	IC(UniMod:4)YIFHETFGR2	2551.69	9117.14	4050
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	ICYIFHETFGR	IC(UniMod:4)YIFHETFGR	3	IC(UniMod:4)YIFHETFGR3	48351.8	47235.7	43053.1
P06757	P06757	ADH1_RAT	Adh1	Alcohol dehydrogenase 1	1	IDAAAPLDK	IDAAAPLDK	2	IDAAAPLDK2	4261.45	8697.88	2308.62
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	IDAAQNWLADPNGGPEGEEQIR	IDAAQNWLADPNGGPEGEEQIR	3	IDAAQNWLADPNGGPEGEEQIR3	247639	257598	244798
A0A0G2JUU7	A0A0G2JUU7	A0A0G2JUU7_RAT	Tubgcp3	Gamma-tubulin complex component	1	IDAAYFETSK	IDAAYFETSK	2	IDAAYFETSK2	60488.6	71979.4	48303.2
D3ZAI6	D3ZAI6	D3ZAI6_RAT	Nt5dc3	5'-nucleotidase domain containing 3	1	IDAFHYIQMGTVYR	IDAFHYIQMGTVYR	2	IDAFHYIQMGTVYR2	3505.72	1903.24	3533.19
D3ZAI6	D3ZAI6	D3ZAI6_RAT	Nt5dc3	5'-nucleotidase domain containing 3	1	IDAFHYIQMGTVYR	IDAFHYIQMGTVYR	3	IDAFHYIQMGTVYR3	10214.7	19582	8463.64
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	IDAFHYVQLGTAYR	IDAFHYVQLGTAYR	2	IDAFHYVQLGTAYR2	6765.6	6054.96	1631.07
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	IDAFHYVQLGTAYR	IDAFHYVQLGTAYR	3	IDAFHYVQLGTAYR3	13830.6	16817.5	14642
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	IDAFQLPQEAQK	IDAFQLPQEAQK	2	IDAFQLPQEAQK2	147663	140399	125574
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	IDAFQLPQEAQK	IDAFQLPQEAQK	3	IDAFQLPQEAQK3	24442.8	23302.4	25619.6
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	IDAHLNK	IDAHLNK	2	IDAHLNK2	14097.5	9869.11	
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	IDAHSGEVCTTR	IDAHSGEVC(UniMod:4)TTR	2	IDAHSGEVC(UniMod:4)TTR2	1543.97	1668.56	1918.86
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	IDAHSGEVCTTR	IDAHSGEVC(UniMod:4)TTR	3	IDAHSGEVC(UniMod:4)TTR3	31505.8	31705.3	42350.6
P58365	P58365	CAD23_RAT	Cdh23	Cadherin-23	1	IDAITGVITVK	IDAITGVITVK	2	IDAITGVITVK2	2273.35		1064.26
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	IDALLDWVTSVGSSDR	IDALLDWVTSVGSSDR	2	IDALLDWVTSVGSSDR2	13528	30414.1	24760.1
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	IDALLDWVTSVGSSDR	IDALLDWVTSVGSSDR	3	IDALLDWVTSVGSSDR3		5168.46	4941.67
F1LXD8	F1LXD8	F1LXD8_RAT	Emilin2	Elastin microfibril interfacer 2	1	IDALREELMEGMDR	IDALREELMEGMDR	3	IDALREELMEGMDR3	59314.3	67154.1	79178.9
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	IDAMDVHVK	IDAMDVHVK	2	IDAMDVHVK2	19326.9	14186.8	12965.7
P38652	P38652	PGM1_RAT	Pgm1	Phosphoglucomutase-1	1	IDAMHGVVGPYVK	IDAMHGVVGPYVK	3	IDAMHGVVGPYVK3	9334.04	14097.8	13128.5
F1M625	A0A8I6A8N5;F1M625;D0RB01	UBP46_RAT	Usp46	Ubiquitin carboxyl-terminal hydrolase 46	0	IDAQAIEEFYGLTSDISK	IDAQAIEEFYGLTSDISK	3	IDAQAIEEFYGLTSDISK3	6531.62	6743.21	2550.2
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	IDASQFR	IDASQFR	2	IDASQFR2	125477	140927	135382
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	IDASQTDFEK	IDASQTDFEK	2	IDASQTDFEK2	58784.9	63197.8	72585.5
A0A8I6AIH6	A0A8I6AIH6	A0A8I6AIH6_RAT	Suclg2	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial	1	IDATQVEVNPFGETPEGQVVCFDAK	IDATQVEVNPFGETPEGQVVC(UniMod:4)FDAK	3	IDATQVEVNPFGETPEGQVVC(UniMod:4)FDAK3	46417.4	44695.9	42037.7
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	IDATSASMLASK	IDATSASMLASK	2	IDATSASMLASK2	986969	1.13019e+06	1.23042e+06
Q03346	Q03346	MPPB_RAT	Pmpcb	Mitochondrial-processing peptidase subunit beta	1	IDAVDAEMVR	IDAVDAEMVR	2	IDAVDAEMVR2	35719	28443.1	31168
P33436	P33436	MMP2_RAT	Mmp2	72 kDa type IV collagenase	1	IDAVYEAPQEEK	IDAVYEAPQEEK	2	IDAVYEAPQEEK2	20596.1	11041.2	16854.2
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	IDCDNLEQYFMQQGGGPDK	IDC(UniMod:4)DNLEQYFMQQGGGPDK	3	IDC(UniMod:4)DNLEQYFMQQGGGPDK3	4490.95		5830.44
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	IDCDNLEQYFMQQGGGPDKK	IDC(UniMod:4)DNLEQYFMQQGGGPDKK	3	IDC(UniMod:4)DNLEQYFMQQGGGPDKK3		4158.78	4158.08
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	IDCFLPHLR	IDC(UniMod:4)FLPHLR	3	IDC(UniMod:4)FLPHLR3	5644.17	10137.3	4772.63
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	IDCFLPHLRDELFK	IDC(UniMod:4)FLPHLRDELFK	4	IDC(UniMod:4)FLPHLRDELFK4	10088.7	15396.4	14934.4
Q5FVI6	Q5FVI6	VATC1_RAT	Atp6v1c1	V-type proton ATPase subunit C 1	1	IDCNLLEFK	IDC(UniMod:4)NLLEFK	2	IDC(UniMod:4)NLLEFK2	9736.12	9636.63	10094.9
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	IDCWFLHR	IDC(UniMod:4)WFLHR	3	IDC(UniMod:4)WFLHR3	12822.7	16421.6	15017.6
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	IDDAQVR	IDDAQVR	2	IDDAQVR2	147686	147022	150443
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	IDDEIRYECK	IDDEIRYEC(UniMod:4)K	2	IDDEIRYEC(UniMod:4)K2	7089.57	8738.27	6157.66
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	IDDEIRYECK	IDDEIRYEC(UniMod:4)K	3	IDDEIRYEC(UniMod:4)K3	540025	492639	517923
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	IDDFILHK	IDDFILHK	2	IDDFILHK2	23529.4	18230	17081.9
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	IDDIFER	IDDIFER	2	IDDIFER2	830651	967743	926552
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	IDDIRKPGESEE	IDDIRKPGESEE	2	IDDIRKPGESEE2	3437.7	4899.06	2074.82
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	IDDIRKPGESEE	IDDIRKPGESEE	3	IDDIRKPGESEE3	96577.6	92769.8	86713.5
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	IDDIVSGHK	IDDIVSGHK	2	IDDIVSGHK2	44969	32197.7	34178.2
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	IDDIVSGHKK	IDDIVSGHKK	2	IDDIVSGHKK2	4911.76	5025.02	6582.99
D3ZD11	D3ZD11	D3ZD11_RAT	Spcs2	Signal peptidase complex subunit 2	1	IDDKPVK	IDDKPVK	1	IDDKPVK1			18176.8
D3ZD11	D3ZD11	D3ZD11_RAT	Spcs2	Signal peptidase complex subunit 2	1	IDDKPVK	IDDKPVK	2	IDDKPVK2	17223.4		38200.7
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	IDDLAQEIK	IDDLAQEIK	2	IDDLAQEIK2	40224.3	39715	59328.9
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	IDDLAQEIKDR	IDDLAQEIKDR	3	IDDLAQEIKDR3	12849.6	17448.1	14409.2
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	IDDLQMVLNQTEDHR	IDDLQMVLNQTEDHR	2	IDDLQMVLNQTEDHR2	3696.31	4434.84	
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	IDDLQMVLNQTEDHR	IDDLQMVLNQTEDHR	3	IDDLQMVLNQTEDHR3	60055	53916.3	48873.4
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	IDDLVPK	IDDLVPK	2	IDDLVPK2	103405	100565	92816.4
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	IDDMEEK	IDDMEEK	2	IDDMEEK2	40735	35138.6	33847.6
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	IDDMEEKEQELQAK	IDDMEEKEQELQAK	2	IDDMEEKEQELQAK2	2087.4		3171.64
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	IDDMEEKEQELQAK	IDDMEEKEQELQAK	3	IDDMEEKEQELQAK3	174031	132915	186900
Q63528	Q63528	RFA2_RAT	Rpa2	Replication protein A 32 kDa subunit	1	IDDMTAAPMDVR	IDDMTAAPMDVR	2	IDDMTAAPMDVR2	9127.57	4547	9366.41
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	IDDPTDSKPEDWDKPEHIPDPDAK	IDDPTDSKPEDWDKPEHIPDPDAK	3	IDDPTDSKPEDWDKPEHIPDPDAK3	111440	83931.6	87174.9
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	IDDPTDSKPEDWDKPEHIPDPDAK	IDDPTDSKPEDWDKPEHIPDPDAK	4	IDDPTDSKPEDWDKPEHIPDPDAK4	3.73563e+06	3.69269e+06	3.91908e+06
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	IDDSGSMQYLK	IDDSGSMQYLK	2	IDDSGSMQYLK2	21185.3	19232.8	17480.5
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	IDDVLHTLTGAMSLLR	IDDVLHTLTGAMSLLR	3	IDDVLHTLTGAMSLLR3	8399.91	4197.95	9080.16
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	IDDVVNTR	IDDVVNTR	2	IDDVVNTR2	421612	385961	397627
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	IDEALINSHVLATSEIFASK	IDEALINSHVLATSEIFASK	3	IDEALINSHVLATSEIFASK3	10979.7	5946.08	13461.3
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	IDEAVLITWTK	IDEAVLITWTK	2	IDEAVLITWTK2	119176	94494.7	101929
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	IDEETGVIETSDR	IDEETGVIETSDR	2	IDEETGVIETSDR2	4624.82	2433.22	1990.79
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	IDEETGVIETSDRLDR	IDEETGVIETSDRLDR	3	IDEETGVIETSDRLDR3	30606.2	30554.8	34866.5
O35763	O35763	MOES_RAT	Msn	Moesin	1	IDEFESM	IDEFESM	1	IDEFESM1	8911.69	6721	7226.95
A0A8I6AUQ7	A0A8I6AUQ7	A0A8I6AUQ7_RAT	Zpr1	ZPR1 zinc finger	1	IDEFIGK	IDEFIGK	2	IDEFIGK2	14485	13365.9	7997.52
A0A8I6G5Q1	A0A8I6G5Q1	A0A8I6G5Q1_RAT	Sema4d	Semaphorin 4D	1	IDELSAR	IDELSAR	2	IDELSAR2	53820	60358.7	71634.1
M0R7V3	M0R7V3	M0R7V3_RAT	Apoo	MICOS complex subunit	1	IDELSLYSVPEGQSK	IDELSLYSVPEGQSK	2	IDELSLYSVPEGQSK2	22327.4	16060.6	18551.9
Q63556	Q63556	SPA3M_RAT	Serpina3m	Serine protease inhibitor A3M (Fragment)	1	IDELYLPR	IDELYLPR	2	IDELYLPR2	452573	409043	430804
Q8VHK7	Q8VHK7	HDGF_RAT	Hdgf	Hepatoma-derived growth factor	1	IDEMPEAAVK	IDEMPEAAVK	2	IDEMPEAAVK2	20246.8	10002.7	18143.5
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	IDEMVCFALPQR	IDEMVC(UniMod:4)FALPQR	2	IDEMVC(UniMod:4)FALPQR2	6133.08	8303.45	3368.06
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	IDEMVCFALPQREER	IDEMVC(UniMod:4)FALPQREER	3	IDEMVC(UniMod:4)FALPQREER3	6039.8	12488	5316.27
Q5U2M6	Q5U2M6	DCAF8_RAT	Dcaf8	DDB1- and CUL4-associated factor 8	1	IDENENNGVLK	IDENENNGVLK	2	IDENENNGVLK2	1988.48		3587.17
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	IDENGLIK	IDENGLIK	2	IDENGLIK2	39530	43914.5	26838.7
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	IDENQLMYLPDSIGGLR	IDENQLMYLPDSIGGLR	2	IDENQLMYLPDSIGGLR2	236136	249694	238854
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	IDENQLMYLPDSIGGLR	IDENQLMYLPDSIGGLR	3	IDENQLMYLPDSIGGLR3	56368.4	65463.7	70155.1
Q08851	Q08851	STX5_RAT	Stx5	Syntaxin-5	1	IDENVLGAQLDVEAAHSEILK	IDENVLGAQLDVEAAHSEILK	3	IDENVLGAQLDVEAAHSEILK3	13282.3		14507.2
Q5I0D7	Q5I0D7	PEPD_RAT	Pepd	Xaa-Pro dipeptidase	1	IDEPGLR	IDEPGLR	2	IDEPGLR2	28548.2	24223.2	23483.8
P61980	P61980	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	1	IDEPLEGSEDR	IDEPLEGSEDR	2	IDEPLEGSEDR2	165098	157794	148808
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	IDESIHLQLR	IDESIHLQLR	2	IDESIHLQLR2	6079.88	6920.33	7722.03
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	IDESIHLQLR	IDESIHLQLR	3	IDESIHLQLR3	227774	243837	211328
P11505	Q64542;P11505	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	0	IDESSLTGESDHVK	IDESSLTGESDHVK	2	IDESSLTGESDHVK2	4517.06	1759	2852.69
P11505	Q64542;P11505	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	0	IDESSLTGESDHVK	IDESSLTGESDHVK	3	IDESSLTGESDHVK3	13884.5	19279.7	23132.3
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	IDEVAPMR	IDEVAPMR	2	IDEVAPMR2	92271	99788	86466.5
Q641Y2	Q641Y2	NDUS2_RAT	Ndufs2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	1	IDEVEEMLTNNR	IDEVEEMLTNNR	2	IDEVEEMLTNNR2	52805.4	37676.6	44501.1
Q641Y2	Q641Y2	NDUS2_RAT	Ndufs2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	1	IDEVEEMLTNNR	IDEVEEMLTNNR	3	IDEVEEMLTNNR3	9029.42	7700.58	10595.8
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	IDEVTQK	IDEVTQK	1	IDEVTQK1	592.262	2720.03	1426.3
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	IDEVTQK	IDEVTQK	2	IDEVTQK2	161943	212322	
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	IDEYDYSKPIEGQQK	IDEYDYSKPIEGQQK	2	IDEYDYSKPIEGQQK2	2790.6	5428.3	5928.4
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	IDEYDYSKPIEGQQK	IDEYDYSKPIEGQQK	3	IDEYDYSKPIEGQQK3	67363.9	73868.7	74820
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	IDFADIVTK	IDFADIVTK	2	IDFADIVTK2	90468.2	106119	122274
Q304F3	Q304F3	Q304F3_RAT	Tnnc2	Troponin C2, fast skeletal type	1	IDFDEFLK	IDFDEFLK	2	IDFDEFLK2	8424.16	18900.3	12709.9
A0A8I5ZX76	A0A8I5ZX76	A0A8I5ZX76_RAT	Eif3k	Eukaryotic translation initiation factor 3 subunit K	1	IDFDSVSSIMASSQ	IDFDSVSSIMASSQ	2	IDFDSVSSIMASSQ2	8070.5	11621.6	9917.67
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	IDFEKEPLGVNAQGQQVFLK	IDFEKEPLGVNAQGQQVFLK	3	IDFEKEPLGVNAQGQQVFLK3	3682.34	7308.37	5499.78
P08753	P08753	GNAI3_RAT	Gnai3	Guanine nucleotide-binding protein G(i) subunit alpha-3	1	IDFGEAAR	IDFGEAAR	2	IDFGEAAR2	351027	339359	398346
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	IDFGNEFK	IDFGNEFK	2	IDFGNEFK2	14209	14470.4	25149.4
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	IDFHNPDR	IDFHNPDR	2	IDFHNPDR2	65859.4	47664.5	50090
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	IDFLNNYALFLSPHAQQASWQLSTR	IDFLNNYALFLSPHAQQASWQLSTR	3	IDFLNNYALFLSPHAQQASWQLSTR3	66613	65057.8	79049.9
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	IDFLNNYALFLSPHAQQASWQLSTR	IDFLNNYALFLSPHAQQASWQLSTR	4	IDFLNNYALFLSPHAQQASWQLSTR4	6268.15	8851.08	
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	IDFSDIMVLGDINTKPK	IDFSDIMVLGDINTKPK	3	IDFSDIMVLGDINTKPK3	11978.9	4914.23	5352.65
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	IDFSLMDK	IDFSLMDK	2	IDFSLMDK2	39213.8	41121	40472.4
A0A8I5Y0Y2	A0A8I5Y0Y2	A0A8I5Y0Y2_RAT	Ddi2	DNA damage inducible 1 homolog 2	1	IDFSSIAVPGTSNPQQR	IDFSSIAVPGTSNPQQR	2	IDFSSIAVPGTSNPQQR2	7205.13	12167.7	6850.77
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	IDFTPSER	IDFTPSER	2	IDFTPSER2	20824.4	23786.1	16972.3
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	IDFVGELNDK	IDFVGELNDK	2	IDFVGELNDK2	32782.8	27156.7	33011.9
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	IDFVLVYEDESK	IDFVLVYEDESK	2	IDFVLVYEDESK2	33956.1	15080.8	20910.1
Q63945	Q63945	SET_RAT	Set	Protein SET	1	IDFYFDENPYFENK	IDFYFDENPYFENK	2	IDFYFDENPYFENK2	7355.48	3473.65	
Q62639	Q62639	RHEB_RAT	Rheb	GTP-binding protein Rheb	1	IDGAASQGK	IDGAASQGK	1	IDGAASQGK1			1455.64
Q62639	Q62639	RHEB_RAT	Rheb	GTP-binding protein Rheb	1	IDGAASQGK	IDGAASQGK	2	IDGAASQGK2			131952
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	IDGITIQAR	IDGITIQAR	2	IDGITIQAR2	638686	637154	614077
Q0D2L2	Q0D2L2	Q0D2L2_RAT	Mrps22	Mitochondrial ribosomal protein S22	1	IDGLLIDQIQR	IDGLLIDQIQR	2	IDGLLIDQIQR2	3688.32	3354.5	6712.22
P20070	P20070	NB5R3_RAT	Cyb5r3	NADH-cytochrome b5 reductase 3	1	IDGNLVIR	IDGNLVIR	2	IDGNLVIR2	20923.7	21544.2	21731.9
P20070	P20070	NB5R3_RAT	Cyb5r3	NADH-cytochrome b5 reductase 3	1	IDGNLVIRPYTPVSSDDDKGFVDLVVK	IDGNLVIRPYTPVSSDDDKGFVDLVVK	4	IDGNLVIRPYTPVSSDDDKGFVDLVVK4	16733.5	18494.9	19991.4
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	IDGPVGQR	IDGPVGQR	2	IDGPVGQR2	889826	937528	911619
O70595	O70595	ABCB6_RAT	Abcb6	ATP-binding cassette sub-family B member 6	1	IDGQDISQVTQISLR	IDGQDISQVTQISLR	2	IDGQDISQVTQISLR2	15666.4	9418.04	11541.2
D4A0G9	D4A0G9	D4A0G9_RAT	Ercc6l	ERCC excision repair 6 like, spindle assembly checkpoint helicase	1	IDGTVTHLWER	IDGTVTHLWER	3	IDGTVTHLWER3	5118.64	5552.59	4350.92
Q32PY2	Q32PY2	LIPH_RAT	Liph	Lipase member H	1	IDHEPSAFQK	IDHEPSAFQK	3	IDHEPSAFQK3	6439.1	7072.34	
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	IDHILDAL	IDHILDAL	1	IDHILDAL1	26228.8	25046.1	16291.8
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	IDHILDAL	IDHILDAL	2	IDHILDAL2	209741	192009	189603
F1LUQ0	F1LUQ0	F1LUQ0_RAT	Mcub	Calcium uniporter regulatory subunit MCUb	1	IDHLQEQLRPLEQVK	IDHLQEQLRPLEQVK	3	IDHLQEQLRPLEQVK3	7212.66	2926.84	7200.4
A0A0G2JYN4	A0A0G2JYN4	A0A0G2JYN4_RAT	Ergic2	Endoplasmic reticulum-Golgi intermediate compartment protein	1	IDHLSFGELVPGIINPLDGTEK	IDHLSFGELVPGIINPLDGTEK	3	IDHLSFGELVPGIINPLDGTEK3	8999.4	12878.7	12172.5
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	IDHSGFSPHAAIYSTRPDVK	IDHSGFSPHAAIYSTRPDVK	3	IDHSGFSPHAAIYSTRPDVK3	10668.6	18038.9	3894.85
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	IDHSGFSPHAAIYSTRPDVK	IDHSGFSPHAAIYSTRPDVK	4	IDHSGFSPHAAIYSTRPDVK4	48747.5	49875.3	53491.7
P0C089	P0C089	PTPM1_RAT	Ptpmt1	Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1	1	IDHTVLLGALPLR	IDHTVLLGALPLR	3	IDHTVLLGALPLR3	5040.04	1587.27	5012.67
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	IDHYLGK	IDHYLGK	2	IDHYLGK2	25705.3	21739.7	17021.2
D3ZL11	D3ZL11	D3ZL11_RAT	Rbsn	Rabenosyn, RAB effector	1	IDHYVIEVNK	IDHYVIEVNK	3	IDHYVIEVNK3	6021.89	10747.1	8320.09
O70377	O70377	SNP23_RAT	Snap23	Synaptosomal-associated protein 23	1	IDIANTR	IDIANTR	2	IDIANTR2	986178	1.07591e+06	1.2107e+06
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	IDIDNSGYVSDYELQDLFK	IDIDNSGYVSDYELQDLFK	3	IDIDNSGYVSDYELQDLFK3	11620.5	10639.7	2544.1
Q4KMA2	Q4KMA2	RD23B_RAT	Rad23b	UV excision repair protein RAD23 homolog B	1	IDIDPEETVK	IDIDPEETVK	2	IDIDPEETVK2	53396.9	46872.4	51132.5
P34058	A0A8I6GLF3;P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	IDIIPNPQER	IDIIPNPQER	2	IDIIPNPQER2	5.49635e+06	6.24737e+06	6.08912e+06
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	IDILDSALLR	IDILDSALLR	2	IDILDSALLR2	9999.97	9178.47	7804.11
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	IDILDSALLRPGR	IDILDSALLRPGR	3	IDILDSALLRPGR3	315135	286491	304382
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	IDILTELR	IDILTELR	2	IDILTELR2	870549	906533	858415
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	IDILTELRDK	IDILTELRDK	2	IDILTELRDK2	5998.41	7389.04	6908.37
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	IDILTELRDK	IDILTELRDK	3	IDILTELRDK3	111262	161898	160602
A0A8I5ZN24	A0A8I5ZN24	A0A8I5ZN24_RAT	Dhrs7	Dehydrogenase/reductase 7	1	IDILVNNGGR	IDILVNNGGR	2	IDILVNNGGR2	64623.9	57534.2	62297.6
Q63598	Q63598	PLST_RAT	Pls3	Plastin-3	1	IDINMSGFNETDDLK	IDINMSGFNETDDLK	2	IDINMSGFNETDDLK2	6473.18	6371.36	7917.88
Q63598	Q63598	PLST_RAT	Pls3	Plastin-3	1	IDINMSGFNETDDLKR	IDINMSGFNETDDLKR	3	IDINMSGFNETDDLKR3	5977.22	6875.74	1087.7
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	IDISPAPENPHYCLTPELLQVK	IDISPAPENPHYC(UniMod:4)LTPELLQVK	3	IDISPAPENPHYC(UniMod:4)LTPELLQVK3	384587	421781	365001
Q9QZ81	Q9QZ81	AGO2_RAT	Ago2	Protein argonaute-2	1	IDIYHYELDIKPEK	IDIYHYELDIKPEK	4	IDIYHYELDIKPEK4	5092.26	6319.71	
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	IDKELINR	IDKELINR	2	IDKELINR2	36066.4	20654.1	18058.1
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	IDKPLCHSEDEK	IDKPLC(UniMod:4)HSEDEK	2	IDKPLC(UniMod:4)HSEDEK2	205401	186954	218357
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	IDKPLCHSEDEK	IDKPLC(UniMod:4)HSEDEK	3	IDKPLC(UniMod:4)HSEDEK3	522615		561702
Q925Q9	Q925Q9	SH3K1_RAT	Sh3kbp1	SH3 domain-containing kinase-binding protein 1	1	IDLAGSTLSGILDK	IDLAGSTLSGILDK	2	IDLAGSTLSGILDK2	4474.71		4992.7
Q925Q9	Q925Q9	SH3K1_RAT	Sh3kbp1	SH3 domain-containing kinase-binding protein 1	1	IDLAGSTLSGILDKDLSDR	IDLAGSTLSGILDKDLSDR	3	IDLAGSTLSGILDKDLSDR3	17915.2	26830.6	25735.7
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	IDLAVGDVVK	IDLAVGDVVK	2	IDLAVGDVVK2	1.01094e+06	852992	815172
A0A8I6ACU2	A0A8I6ACU2	A0A8I6ACU2_RAT	Ubap2l	Ubiquitin associated protein 2-like	1	IDLAVLLGK	IDLAVLLGK	2	IDLAVLLGK2	24837.9	7279.49	12035.3
P51158	P51158	RAB28_RAT	Rab28	Ras-related protein Rab-28	1	IDLEHMR	IDLEHMR	2	IDLEHMR2	9128.43		11221.2
Q6AXT5	Q6AXT5	RAB21_RAT	Rab21	Ras-related protein Rab-21	1	IDLEKER	IDLEKER	2	IDLEKER2	29864.8	32577.5	46199.3
D4AEK9	D4AEK9	D4AEK9_RAT	Ccdc6	Coiled-coil domain containing 6	1	IDLENTLEQEQEALVNR	IDLENTLEQEQEALVNR	3	IDLENTLEQEQEALVNR3	15858	16740	22224.9
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	IDLETGENR	IDLETGENR	2	IDLETGENR2	144120	194002	152344
Q9QZH7	Q9QZH7	FXL20_RAT	Fbxl20	F-box/LRR-repeat protein 20	1	IDLFDFQR	IDLFDFQR	2	IDLFDFQR2	49364.6	59169.1	50746.4
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	IDLGERPVVQR	IDLGERPVVQR	3	IDLGERPVVQR3	269272	304992	292196
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	IDLLAQPR	IDLLAQPR	2	IDLLAQPR2	63324.2	58888.6	71710.8
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	IDLPAENSNSETIVITGK	IDLPAENSNSETIVITGK	2	IDLPAENSNSETIVITGK2	12436.8	11666.6	12178.7
A0A8J8XL70	A0A8J8XL70	A0A8J8XL70_RAT	Serpinf1	Serpin family F member 1	1	IDLQEINNWVQAQMK	IDLQEINNWVQAQMK	2	IDLQEINNWVQAQMK2	17472.5	13103	13069.5
A0A8J8XL70	A0A8J8XL70	A0A8J8XL70_RAT	Serpinf1	Serpin family F member 1	1	IDLQEINNWVQAQMK	IDLQEINNWVQAQMK	3	IDLQEINNWVQAQMK3	27616.1	20093.4	15889
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	IDLRPVLGEGVPILASFLR	IDLRPVLGEGVPILASFLR	3	IDLRPVLGEGVPILASFLR3	11115	27468.1	66474.5
D4A748	D4A748	D4A748_RAT	Wdfy4	WDFY family member 4	1	IDLSSITDPLIK	IDLSSITDPLIK	2	IDLSSITDPLIK2	2219.35	4689.19	
Q5M8C6	Q5M8C6	FGL1_RAT	Fgl1	Fibrinogen-like protein 1	1	IDLTDFEK	IDLTDFEK	2	IDLTDFEK2	106421	85465.4	74839.4
D3ZMI6	D3ZMI6	D3ZMI6_RAT	Olfm4	Olfactomedin 4	1	IDLTTNGVTVNQPLPQAAYNNR	IDLTTNGVTVNQPLPQAAYNNR	3	IDLTTNGVTVNQPLPQAAYNNR3	59258.5	72535.9	70981
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	IDMCPANILQETLK	IDMC(UniMod:4)PANILQETLK	2	IDMC(UniMod:4)PANILQETLK2	39054.3	33466.4	32718.1
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	IDMCPANILQETLK	IDMC(UniMod:4)PANILQETLK	3	IDMC(UniMod:4)PANILQETLK3	4727.52	6025.19	3721.12
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	IDMESLLMCTVDDLKEMGIPLGPR	IDMESLLMC(UniMod:4)TVDDLKEMGIPLGPR	3	IDMESLLMC(UniMod:4)TVDDLKEMGIPLGPR3		5137.38	
B5DFC3	B5DFC3;D3ZCT7	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	0	IDMNLTDLLGELQR	IDMNLTDLLGELQR	2	IDMNLTDLLGELQR2	4085.85	12002.6	7194.06
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	IDMSSNNGCMR	IDMSSNNGC(UniMod:4)MR	2	IDMSSNNGC(UniMod:4)MR2	18910.1	18783.4	24634.7
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	IDMSSNNGCMRDPTLYR	IDMSSNNGC(UniMod:4)MRDPTLYR	3	IDMSSNNGC(UniMod:4)MRDPTLYR3	15445.4	15062.4	21282.3
Q5XIP9	Q5XIP9	TMM43_RAT	Tmem43	Transmembrane protein 43	1	IDNFKPLSLAK	IDNFKPLSLAK	2	IDNFKPLSLAK2	6465.76	6538.15	6668.3
Q5XIP9	Q5XIP9	TMM43_RAT	Tmem43	Transmembrane protein 43	1	IDNFKPLSLAK	IDNFKPLSLAK	3	IDNFKPLSLAK3	146896	166709	176749
Q5GH61	Q5GH61	XK_RAT	Xk	Endoplasmic reticulum membrane adapter protein XK	1	IDNPELISK	IDNPELISK	2	IDNPELISK2	16537.9	9110.7	11130.7
Q32Q07	Q32Q07	LRRN1_RAT	Lrrn1	Leucine-rich repeat neuronal protein 1	1	IDNPHITYTAR	IDNPHITYTAR	3	IDNPHITYTAR3	22274.3	19754	12771.3
P70567	P70567	TMOD1_RAT	Tmod1	Tropomodulin-1	1	IDNQSQPLGNK	IDNQSQPLGNK	2	IDNQSQPLGNK2	6081	7039.09	7942
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	IDNSQVESGSLEDDWDFLPPK	IDNSQVESGSLEDDWDFLPPK	3	IDNSQVESGSLEDDWDFLPPK3	1.15083e+06	1.11433e+06	1.35823e+06
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	IDNSQVESGSLEDDWDFLPPKK	IDNSQVESGSLEDDWDFLPPKK	3	IDNSQVESGSLEDDWDFLPPKK3	225653	216391	277811
F7FFW7	F7FFW7	F7FFW7_RAT	Atp6v0d1	ATPase H+ transporting V0 subunit D1	1	IDNYIPIF	IDNYIPIF	2	IDNYIPIF2	5635.38	9024.66	10593.3
Q5FVQ0	Q5FVQ0	S39A8_RAT	Slc39a8	Metal cation symporter ZIP8	1	IDNYVEK	IDNYVEK	1	IDNYVEK1	1373.73	245.237	1311.64
A0A8I6A2J1	A0A8I6A2J1	A0A8I6A2J1_RAT	ENSRNOG00000064886	Ig-like domain-containing protein	1	IDPANGNTIYAEK	IDPANGNTIYAEK	2	IDPANGNTIYAEK2	80149.4	84168.6	90012.6
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	IDPAYFDDNWLNR	IDPAYFDDNWLNR	2	IDPAYFDDNWLNR2	29947.9	29556.3	28402
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	IDPAYFDDNWLNR	IDPAYFDDNWLNR	3	IDPAYFDDNWLNR3		2328.54	2467.62
A0A8I6AGQ4	A0A8I6AGQ4	A0A8I6AGQ4_RAT	ENSRNOG00000070415	Ig-like domain-containing protein	1	IDPEDGSTDYVEK	IDPEDGSTDYVEK	2	IDPEDGSTDYVEK2	82312.1	69164	63632.3
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	IDPESGDLIATK	IDPESGDLIATK	2	IDPESGDLIATK2	23921.9	22136.7	14312.4
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	IDPFGGDPFK	IDPFGGDPFK	2	IDPFGGDPFK2	199041	209373	197813
Q9QX69	Q9QX69	LANC1_RAT	Lancl1	Glutathione S-transferase LANCL1	1	IDPHVPNEMLYGR	IDPHVPNEMLYGR	3	IDPHVPNEMLYGR3	2417.19	3530.03	7167.32
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	IDPLALVQAIER	IDPLALVQAIER	2	IDPLALVQAIER2	5570.7	5643.25	5829.85
A2VCX1	A2VCX1	TIPRL_RAT	Tiprl	TIP41-like protein	1	IDPNPVDSESAPSE	IDPNPVDSESAPSE	2	IDPNPVDSESAPSE2	11993.1	12930.1	7996.94
F1LZ05	F1LZ05	F1LZ05_RAT	Parp14	Poly [ADP-ribose] polymerase	1	IDPPLIIDYLK	IDPPLIIDYLK	2	IDPPLIIDYLK2	8854.07	8202.29	9494
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	IDPQMSAK	IDPQMSAK	2	IDPQMSAK2	39721.4	40373	33327.2
P12711	P12711	ADHX_RAT	Adh5	Alcohol dehydrogenase class-3	1	IDPSAPLDK	IDPSAPLDK	2	IDPSAPLDK2	43047.6	24870.1	37855.5
P97943	P97943	SCRB1_RAT	Scarb1	Scavenger receptor class B member 1	1	IDPSSLSFGMWK	IDPSSLSFGMWK	2	IDPSSLSFGMWK2	13862.1	13898.7	19374.8
P81795	C9WPN6;P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	0	IDPTLCR	IDPTLC(UniMod:4)R	2	IDPTLC(UniMod:4)R2	620719	649286	658234
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	IDPTVTMMQVEEKPDVTYSDVGGCK	IDPTVTMMQVEEKPDVTYSDVGGC(UniMod:4)K	3	IDPTVTMMQVEEKPDVTYSDVGGC(UniMod:4)K3	69297.8	57076	65014.7
Q9Z1Y3	Q9Z1Y3	CADH2_RAT	Cdh2	Cadherin-2	1	IDPVNGQITTIAVLDR	IDPVNGQITTIAVLDR	2	IDPVNGQITTIAVLDR2	2467.19	2077.71	
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	IDPYVFDR	IDPYVFDR	2	IDPYVFDR2	304522	306187	323008
Q68FQ7	Q68FQ7	RPAP3_RAT	Rpap3	RNA polymerase II-associated protein 3	1	IDQALTSK	IDQALTSK	2	IDQALTSK2	13321.9	9239.45	11747.2
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	IDQDLRNEEK	IDQDLRNEEK	3	IDQDLRNEEK3	46477.9	80245.1	80113.4
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	IDQEGKIPADTLAK	IDQEGKIPADTLAK	3	IDQEGKIPADTLAK3	7948.23	5199.74	9263.92
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	IDQISMEEVDR	IDQISMEEVDR	2	IDQISMEEVDR2	121483	131509	110197
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	IDQLEGDHQLIQEALIFDNK	IDQLEGDHQLIQEALIFDNK	3	IDQLEGDHQLIQEALIFDNK3	1.135e+06	1.15365e+06	1.19874e+06
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	IDQLEGDHQLIQEALIFDNK	IDQLEGDHQLIQEALIFDNK	4	IDQLEGDHQLIQEALIFDNK4	26961.9	19144.9	19741.6
P04764	M0R5J4;A0A8I6GJ97;A0A8I6ASH7;P04764;A0A8I5YC61	ENOA_RAT	Eno1	Alpha-enolase	0	IDQLMIEMDGTENK	IDQLMIEMDGTENK	2	IDQLMIEMDGTENK2	227482	227054	236400
P04764	M0R5J4;A0A8I6GJ97;A0A8I6ASH7;P04764;A0A8I5YC61	ENOA_RAT	Eno1	Alpha-enolase	0	IDQLMIEMDGTENK	IDQLMIEMDGTENK	3	IDQLMIEMDGTENK3	7331.56	5279.82	6455.4
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	IDQLQEELLHTQLK	IDQLQEELLHTQLK	2	IDQLQEELLHTQLK2	5589.71	3860.43	4388.24
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	IDQLQEELLHTQLK	IDQLQEELLHTQLK	3	IDQLQEELLHTQLK3	65117	72697.7	61570.5
Q9QYP2	Q9QYP2	CELR2_RAT	Celsr2	Cadherin EGF LAG seven-pass G-type receptor 2 (Fragment)	1	IDQPCPR	IDQPC(UniMod:4)PR	2	IDQPC(UniMod:4)PR2	25825.2	15216	
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	IDQVNQLLELDHQK	IDQVNQLLELDHQK	2	IDQVNQLLELDHQK2	10049.1	8077.57	9013.25
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	IDQVNQLLELDHQK	IDQVNQLLELDHQK	3	IDQVNQLLELDHQK3	78652.1	85533.7	81937.2
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	IDQVNQLLELDHQKR	IDQVNQLLELDHQKR	3	IDQVNQLLELDHQKR3	4533.9	8757.52	
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	IDQVNQLLELDHQKR	IDQVNQLLELDHQKR	4	IDQVNQLLELDHQKR4	6188.8	18320.7	22405.2
P20909	P20909	COBA1_RAT	Col11a1	Collagen alpha-1(XI) chain	1	IDQVPIIDVMINDFGDQNQK	IDQVPIIDVMINDFGDQNQK	3	IDQVPIIDVMINDFGDQNQK3	2677.65		1598.79
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	IDQVYHALDTTVK	IDQVYHALDTTVK	2	IDQVYHALDTTVK2		4341.2	
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	IDQVYHALDTTVK	IDQVYHALDTTVK	3	IDQVYHALDTTVK3	33997.2	36021.4	35978
Q920J4	Q920J4	TXNL1_RAT	Txnl1	Thioredoxin-like protein 1	1	IDQYQGADAVGLEEK	IDQYQGADAVGLEEK	2	IDQYQGADAVGLEEK2	66745.9	57029.1	72216.7
Q920J4	Q920J4	TXNL1_RAT	Txnl1	Thioredoxin-like protein 1	1	IDQYQGADAVGLEEK	IDQYQGADAVGLEEK	3	IDQYQGADAVGLEEK3	7774.8	7973.06	12457.9
D3ZJR7	D3ZJR7	D3ZJR7_RAT	Dsc2	Desmocollin 2	1	IDRDTGNLYCTDR	IDRDTGNLYC(UniMod:4)TDR	3	IDRDTGNLYC(UniMod:4)TDR3	63910.1	81876.2	75750.9
Q68HB8	Q68HB8	Q68HB8_RAT	Pcdh7	Protocadherin 7	1	IDREEVNQLR	IDREEVNQLR	3	IDREEVNQLR3	13445.8	18219	15564.1
F7EKI5	F7EKI5	F7EKI5_RAT	Pcdh18	Protocadherin 18	1	IDREQLCQK	IDREQLC(UniMod:4)QK	3	IDREQLC(UniMod:4)QK3	57759.8	65680	66131.4
Q5HZY2	Q5HZY2	SAR1B_RAT	Sar1b	GTP-binding protein SAR1b	1	IDRPEAISEER	IDRPEAISEER	2	IDRPEAISEER2	4629.9	4443.32	4325.11
Q5HZY2	Q5HZY2	SAR1B_RAT	Sar1b	GTP-binding protein SAR1b	1	IDRPEAISEER	IDRPEAISEER	3	IDRPEAISEER3	243645	245748	287724
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	IDRPEASR	IDRPEASR	2	IDRPEASR2			22805.6
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	IDSDGDGLVTTEELK	IDSDGDGLVTTEELK	2	IDSDGDGLVTTEELK2	5123.54	5087.34	6779.36
A0JN30	A0JN30	A0JN30_RAT	Cnpy2	Canopy FGF signaling regulator 2	1	IDSDISGTLK	IDSDISGTLK	2	IDSDISGTLK2	82537.6	77497	56348.6
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	IDSEGISQNHTGQVASADASGFAGVVGHK	IDSEGISQNHTGQVASADASGFAGVVGHK	3	IDSEGISQNHTGQVASADASGFAGVVGHK3	1589.06		
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	IDSEGISQNHTGQVASADASGFAGVVGHK	IDSEGISQNHTGQVASADASGFAGVVGHK	4	IDSEGISQNHTGQVASADASGFAGVVGHK4	10152	12688.5	9724.85
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	IDSFHITGLPDDFK	IDSFHITGLPDDFK	2	IDSFHITGLPDDFK2	5416.75	3627.84	
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	IDSFHITGLPDDFK	IDSFHITGLPDDFK	3	IDSFHITGLPDDFK3	27336.2	24115.5	26855.7
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	IDSFHITGLPDDFKK	IDSFHITGLPDDFKK	4	IDSFHITGLPDDFKK4	11333.6	11162.4	12039.6
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	IDSFSVQSLDSR	IDSFSVQSLDSR	2	IDSFSVQSLDSR2	5045.59	9377.89	8768.99
P51146	P51146	RAB4B_RAT	Rab4b	Ras-related protein Rab-4B	1	IDSGELDPER	IDSGELDPER	2	IDSGELDPER2	61094.2	46243.8	57044.7
A0A8I5ZQ72	A0A8I5ZQ72	A0A8I5ZQ72_RAT	Zc3h12c	Zinc finger CCCH type containing 12C	1	IDSISDSR	IDSISDSR	2	IDSISDSR2	6587.14	3847.36	
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	IDSLLESDR	IDSLLESDR	2	IDSLLESDR2	540439	1.91615e+06	2.37998e+06
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	IDSLLESDRQQSQVLDAMQDSFTR	IDSLLESDRQQSQVLDAMQDSFTR	3	IDSLLESDRQQSQVLDAMQDSFTR3	519683	652008	600374
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	IDSLLESDRQQSQVLDAMQDSFTR	IDSLLESDRQQSQVLDAMQDSFTR	4	IDSLLESDRQQSQVLDAMQDSFTR4	22228.3	21934.8	10774.1
Q5FVI3	A0A8I6AP35;Q5FVI3	LRC57_RAT	Lrrc57	Leucine-rich repeat-containing protein 57	0	IDSLPPLIIGK	IDSLPPLIIGK	2	IDSLPPLIIGK2	34358.3	30471.3	33335
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	IDSLSAQLSQLQK	IDSLSAQLSQLQK	2	IDSLSAQLSQLQK2	22190.3	21092	32362.7
A0A0G2JUC9	A0A0G2JUC9	A0A0G2JUC9_RAT	Herc2	HECT-type E3 ubiquitin transferase	1	IDSLTGLGVVK	IDSLTGLGVVK	2	IDSLTGLGVVK2	1271.99		2362.28
Q923V4	Q923V4	FBX6_RAT	Fbxo6	F-box only protein 6	1	IDSNGGDEWK	IDSNGGDEWK	2	IDSNGGDEWK2	19566.7	19975.9	20071.4
Q9Z2P6	Q9Z2P6	SNP29_RAT	Snap29	Synaptosomal-associated protein 29	1	IDSNLDELSVGLGR	IDSNLDELSVGLGR	2	IDSNLDELSVGLGR2	34506.3	27107.1	28240.5
Q9Z2P6	Q9Z2P6	SNP29_RAT	Snap29	Synaptosomal-associated protein 29	1	IDSNLDELSVGLGR	IDSNLDELSVGLGR	3	IDSNLDELSVGLGR3	2996.89	2317.72	
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	IDSNQEPYAHAASENIPATFEDAVNK	IDSNQEPYAHAASENIPATFEDAVNK	3	IDSNQEPYAHAASENIPATFEDAVNK3	23539.3	20601.7	19078.8
Q8R431	Q8R431	MGLL_RAT	Mgll	Monoglyceride lipase	1	IDSSVLSR	IDSSVLSR	2	IDSSVLSR2	110917	117220	109063
D4AE59	D4AE59	STK11_RAT	Stk11	Serine/threonine-protein kinase STK11	1	IDSTEVIYQPR	IDSTEVIYQPR	2	IDSTEVIYQPR2	7755.38	8651.35	7363.61
P10536	P10536	RAB1B_RAT	Rab1b	Ras-related protein Rab-1B	1	IDSTPVK	IDSTPVK	1	IDSTPVK1	53764.8	52281.3	40070.2
A0A1W2Q6I2	A0A1W2Q6I2	A0A1W2Q6I2_RAT	Otud6b	ubiquitinyl hydrolase 1	1	IDSVAVNVSNLVLDSQPPR	IDSVAVNVSNLVLDSQPPR	3	IDSVAVNVSNLVLDSQPPR3		7025	8315.9
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	IDSVTGAITVAK	IDSVTGAITVAK	2	IDSVTGAITVAK2	15963.5	13070.5	12423.8
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	IDSVTGDIFSTAPLDR	IDSVTGDIFSTAPLDR	2	IDSVTGDIFSTAPLDR2	78835.7	74087.6	60133.3
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	IDSVTGDIFSTAPLDR	IDSVTGDIFSTAPLDR	3	IDSVTGDIFSTAPLDR3	32701.7	30446.6	28599
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	IDSVTGDIFSTAPLDRETESVYR	IDSVTGDIFSTAPLDRETESVYR	3	IDSVTGDIFSTAPLDRETESVYR3	304098	266820	320316
Q3MIE4	Q3MIE4	VAT1_RAT	Vat1	Synaptic vesicle membrane protein VAT-1 homolog	1	IDSVWPFEK	IDSVWPFEK	2	IDSVWPFEK2	142578	143739	136164
P61943	P61943	SIA10_RAT	St3gal6	Type 2 lactosamine alpha-2,3-sialyltransferase	1	IDSYDVIIR	IDSYDVIIR	2	IDSYDVIIR2	13325.2	6339.36	17603.6
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	IDTDKENAEVK	IDTDKENAEVK	3	IDTDKENAEVK3	35532.9	41097.7	45946.4
Q4V897	Q4V897	CC90B_RAT	Ccdc90b	Coiled-coil domain-containing protein 90B, mitochondrial	1	IDTEIASLK	IDTEIASLK	2	IDTEIASLK2	26326.9	26633.7	27689.5
G3V9T7	G3V9T7	GET3_RAT	Get3	ATPase Get3	1	IDTHNIIVNQLVFPDPEKPCK	IDTHNIIVNQLVFPDPEKPC(UniMod:4)K	3	IDTHNIIVNQLVFPDPEKPC(UniMod:4)K3	20148.8	27090.6	17158.1
G3V9T7	G3V9T7	GET3_RAT	Get3	ATPase Get3	1	IDTHNIIVNQLVFPDPEKPCK	IDTHNIIVNQLVFPDPEKPC(UniMod:4)K	4	IDTHNIIVNQLVFPDPEKPC(UniMod:4)K4	74982	65808.7	99952.9
A7VJC2	A7VJC2;A0A8I5ZYJ3	ROA2_RAT	Hnrnpa2b1	Heterogeneous nuclear ribonucleoproteins A2/B1	0	IDTIEIITDR	IDTIEIITDR	2	IDTIEIITDR2	31836	10977.7	22405.5
Q99N37	Q99N37	RHG17_RAT	Arhgap17	Rho GTPase-activating protein 17	1	IDTLKEEMDEAGNK	IDTLKEEMDEAGNK	3	IDTLKEEMDEAGNK3	11802.3	11083	9954.9
P08650	P08650	CO5_RAT	C5	Complement C5	1	IDTQEVEASSYLSYSDSGHK	IDTQEVEASSYLSYSDSGHK	3	IDTQEVEASSYLSYSDSGHK3	55851.7	40344.3	40883.6
P08650	P08650	CO5_RAT	C5	Complement C5	1	IDTQEVEASSYLSYSDSGHKR	IDTQEVEASSYLSYSDSGHKR	3	IDTQEVEASSYLSYSDSGHKR3	16669.5	11270.9	7740.41
P08650	P08650	CO5_RAT	C5	Complement C5	1	IDTQEVEASSYLSYSDSGHKR	IDTQEVEASSYLSYSDSGHKR	4	IDTQEVEASSYLSYSDSGHKR4	91873.5	59132.5	81075.3
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	IDTRNELESYAYSLK	IDTRNELESYAYSLK	3	IDTRNELESYAYSLK3	9540.07	8221.3	12632.4
O55006	O55006	ROB1_RAT		Protein RoBo-1	1	IDTSCVSGSPPLR	IDTSC(UniMod:4)VSGSPPLR	2	IDTSC(UniMod:4)VSGSPPLR2	5834.91	6319.4	7088.79
Q5FVH4	Q5FVH4	AKTIP_RAT	Aktip	AKT-interacting protein	1	IDTTSPLNPEAAVLYEK	IDTTSPLNPEAAVLYEK	2	IDTTSPLNPEAAVLYEK2		10479.8	6901.89
Q9R1J4	Q9R1J4	MYOC_RAT	Myoc	Myocilin	1	IDTVGTGIR	IDTVGTGIR	2	IDTVGTGIR2		13703.8	8861.92
Q5XHZ9	Q5XHZ9	PCH2_RAT	Trip13	Pachytene checkpoint protein 2 homolog	1	IDVAFVDR	IDVAFVDR	2	IDVAFVDR2	19187.3	20430.3	14951.4
O70351	O70351	HCD2_RAT	Hsd17b10	3-hydroxyacyl-CoA dehydrogenase type-2	1	IDVAVNCAGIAVAIK	IDVAVNC(UniMod:4)AGIAVAIK	2	IDVAVNC(UniMod:4)AGIAVAIK2	43430.6	46433	38262.9
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	IDVCPENAEITLTDFR	IDVC(UniMod:4)PENAEITLTDFR	2	IDVC(UniMod:4)PENAEITLTDFR2	1.65069e+06	1.4554e+06	1.40205e+06
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	IDVCPENAEITLTDFR	IDVC(UniMod:4)PENAEITLTDFR	3	IDVC(UniMod:4)PENAEITLTDFR3	380479	384587	378430
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	IDVCPENAEVTLTDFR	IDVC(UniMod:4)PENAEVTLTDFR	2	IDVC(UniMod:4)PENAEVTLTDFR2	900614	880814	880567
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	IDVCPENAEVTLTDFR	IDVC(UniMod:4)PENAEVTLTDFR	3	IDVC(UniMod:4)PENAEVTLTDFR3	160635	163881	180591
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	IDVEDILCK	IDVEDILC(UniMod:4)K	2	IDVEDILC(UniMod:4)K2	81224.9	76844.4	71233.2
A0A0G2KA90	A0A0G2KA90	A0A0G2KA90_RAT	Dsc1	Desmocollin 1	1	IDVEILR	IDVEILR	2	IDVEILR2	9097.92	7345.7	6431.54
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	IDVFEREEIGGR	IDVFEREEIGGR	3	IDVFEREEIGGR3	96981	126762	131111
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	IDVFSPVEFNK	IDVFSPVEFNK	2	IDVFSPVEFNK2	20569.3	18450.3	21335.4
B2GV97	B2GV97	B2GV97_RAT	Sepsecs	O-phosphoseryl-tRNA(Sec) selenium transferase	1	IDVFVQSLDK	IDVFVQSLDK	2	IDVFVQSLDK2	8427.46	9718.36	4881.43
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	IDVGEAEPR	IDVGEAEPR	2	IDVGEAEPR2	33175.6	19531.4	29442
Q5PQN6	Q5PQN6	SPE39_RAT	Vipas39	Spermatogenesis-defective protein 39 homolog	1	IDVILSSSQIR	IDVILSSSQIR	2	IDVILSSSQIR2	24384.8	26679.3	25957.3
A0A8I6GM43	A0A8I6GM43	A0A8I6GM43_RAT	Pbdc1	Polysaccharide biosynthesis domain containing 1	1	IDVLDPEELK	IDVLDPEELK	2	IDVLDPEELK2	59727	60670.7	56475.6
G3V619	G3V619	G3V619_RAT	Ascc1	Activating signal cointegrator 1 complex subunit 1	1	IDVLLDTFR	IDVLLDTFR	2	IDVLLDTFR2	2984.52	4292.21	
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	IDVNSVIYPSLSFTYAMEDTPFLK	IDVNSVIYPSLSFTYAMEDTPFLK	3	IDVNSVIYPSLSFTYAMEDTPFLK3		6657.44	4912.01
D3ZTC4	D3ZTC4	D3ZTC4_RAT	Ccdc88b	Coiled-coil domain containing 88B	1	IDVQELGETGSR	IDVQELGETGSR	2	IDVQELGETGSR2	2618.92	1674.55	
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	IDVSVAAGHTDR	IDVSVAAGHTDR	2	IDVSVAAGHTDR2	4432.44	1145.06	2058.61
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	IDVSVAAGHTDR	IDVSVAAGHTDR	3	IDVSVAAGHTDR3	8228.72	10763.9	13516.6
Q6P6R2	Q6P6R2;A0A8I6A931	DLDH_RAT	Dld	Dihydrolipoyl dehydrogenase, mitochondrial	0	IDVSVEAASGGK	IDVSVEAASGGK	2	IDVSVEAASGGK2	111356	76237	94895.3
Q641Z8	Q641Z8	PEF1_RAT	Pef1	Peflin	1	IDVVGFSALWK	IDVVGFSALWK	2	IDVVGFSALWK2	5834.9		11060.7
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	IDVVVNNAGILR	IDVVVNNAGILR	2	IDVVVNNAGILR2	112949	117477	109678
D3ZUQ1	D3ZUQ1	D3ZUQ1_RAT	Lipo1	Lipase	1	IDVYITHSLAGTSTQILIHAGQAIR	IDVYITHSLAGTSTQILIHAGQAIR	3	IDVYITHSLAGTSTQILIHAGQAIR3	19965.9	17808.1	14938.7
D3ZUQ1	D3ZUQ1	D3ZUQ1_RAT	Lipo1	Lipase	1	IDVYITHSLAGTSTQILIHAGQAIR	IDVYITHSLAGTSTQILIHAGQAIR	4	IDVYITHSLAGTSTQILIHAGQAIR4	16294	17516.2	11343.2
Q6AYF1	Q6AYF1	SIN1_RAT	Mapkap1	Target of rapamycin complex 2 subunit MAPKAP1	1	IDVYLPLHSSQDR	IDVYLPLHSSQDR	3	IDVYLPLHSSQDR3	13550.1	16620.7	13726.6
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	IDWDAPTGQPSAPGAR	IDWDAPTGQPSAPGAR	2	IDWDAPTGQPSAPGAR2	7099.32	7510.32	7626.63
Q9JLH7	Q9JLH7	CK5P3_RAT	Cdk5rap3	CDK5 regulatory subunit-associated protein 3	1	IDWGDNAVASEITVLETGTEAPEGVAR	IDWGDNAVASEITVLETGTEAPEGVAR	3	IDWGDNAVASEITVLETGTEAPEGVAR3	12376.1	5495.75	7170.73
Q5EGY4	Q5EGY4	YKT6_RAT	Ykt6	Synaptobrevin homolog YKT6	1	IDWPVGSPATIHYTALDGHLSR	IDWPVGSPATIHYTALDGHLSR	3	IDWPVGSPATIHYTALDGHLSR3	4133.18	8962.63	6289.74
Q5EGY4	Q5EGY4	YKT6_RAT	Ykt6	Synaptobrevin homolog YKT6	1	IDWPVGSPATIHYTALDGHLSR	IDWPVGSPATIHYTALDGHLSR	4	IDWPVGSPATIHYTALDGHLSR4	15494.5	11189.1	12961.9
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	IDYANLTGISVSSLSDSLFVLHVQR	IDYANLTGISVSSLSDSLFVLHVQR	3	IDYANLTGISVSSLSDSLFVLHVQR3	9061.72	6658.57	7047.38
A0A1W2Q656	A0A1W2Q656	A0A1W2Q656_RAT	Dner	Delta/notch-like EGF repeat containing	1	IDYCVLDPCR	IDYC(UniMod:4)VLDPC(UniMod:4)R	2	IDYC(UniMod:4)VLDPC(UniMod:4)R2	5450.87	5827.4	4208.82
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	IDYDSLK	IDYDSLK	2	IDYDSLK2	267579	209203	199694
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	IDYDSLKR	IDYDSLKR	2	IDYDSLKR2	35208.3	30085.8	27717.6
Q5FVP9	Q5FVP9	Q5FVP9_RAT	LOC100361907	Cfh protein	1	IDYECHDGYENK	IDYEC(UniMod:4)HDGYENK	2	IDYEC(UniMod:4)HDGYENK2	3312.64	960.057	6663.08
Q5FVP9	Q5FVP9	Q5FVP9_RAT	LOC100361907	Cfh protein	1	IDYECHDGYENK	IDYEC(UniMod:4)HDGYENK	3	IDYEC(UniMod:4)HDGYENK3	92670.4	66383.1	57206.6
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	IDYFSLDPLNIK	IDYFSLDPLNIK	2	IDYFSLDPLNIK2	55444.4	72418.3	42115.3
A0A8I5ZPZ9	A0A8I5ZPZ9	A0A8I5ZPZ9_RAT	Ptpa	Serine/threonine-protein phosphatase 2A activator	1	IDYGTGHEAAFAAFLCCLCK	IDYGTGHEAAFAAFLC(UniMod:4)C(UniMod:4)LC(UniMod:4)K	3	IDYGTGHEAAFAAFLC(UniMod:4)C(UniMod:4)LC(UniMod:4)K3	4367.3	4222.18	
Q9Z1S7	Q9Z1S7	OMD_RAT	Omd	Osteomodulin	1	IDYGVFAK	IDYGVFAK	1	IDYGVFAK1	15549	15812.5	16113.9
Q9Z1S7	Q9Z1S7	OMD_RAT	Omd	Osteomodulin	1	IDYGVFAK	IDYGVFAK	2	IDYGVFAK2	1.1303e+06	1.1515e+06	1.18992e+06
P36972	P36972	APT_RAT	Aprt	Adenine phosphoribosyltransferase	1	IDYIAGLDSR	IDYIAGLDSR	2	IDYIAGLDSR2	45516.1	36559.2	51638.3
A0A0G2K528	A0A0G2K528	A0A0G2K528_RAT	Stx16	Syntaxin 16	1	IDYNVEQSCVK	IDYNVEQSC(UniMod:4)VK	2	IDYNVEQSC(UniMod:4)VK2	21582.4	13031.3	12534.8
Q9ET64	Q9ET64	NSMA_RAT	Smpd2	Sphingomyelin phosphodiesterase 2	1	IDYVLYK	IDYVLYK	2	IDYVLYK2	41916.3	30724.5	43596.2
Q99NA5	Q99NA5	IDH3A_RAT	Idh3a	Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial	1	IEAACFATIK	IEAAC(UniMod:4)FATIK	2	IEAAC(UniMod:4)FATIK2	143925	149188	147328
G3V7E6	G3V7E6	G3V7E6_RAT	Pcm1	Pericentriolar material 1	1	IEAAGVIQSYAK	IEAAGVIQSYAK	2	IEAAGVIQSYAK2	6858.29	4596.63	8254.8
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	IEAASMSGAGR	IEAASMSGAGR	2	IEAASMSGAGR2	542568	716864	570743
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	IEADLEHLKK	IEADLEHLKK	3	IEADLEHLKK3	52118.1	49705.3	51939
P35213	P35213	1433B_RAT	Ywhab	14-3-3 protein beta/alpha	1	IEAELQDICSDVLELLDK	IEAELQDIC(UniMod:4)SDVLELLDK	3	IEAELQDIC(UniMod:4)SDVLELLDK3		12128.5	2778.21
Q66H86	Q66H86	OLFL1_RAT	Olfml1	Olfactomedin-like protein 1	1	IEAGTLGIEHSWDTPCR	IEAGTLGIEHSWDTPC(UniMod:4)R	2	IEAGTLGIEHSWDTPC(UniMod:4)R2	1879.49		2375.77
Q66H86	Q66H86	OLFL1_RAT	Olfml1	Olfactomedin-like protein 1	1	IEAGTLGIEHSWDTPCR	IEAGTLGIEHSWDTPC(UniMod:4)R	3	IEAGTLGIEHSWDTPC(UniMod:4)R3	23269.7	20836.6	34652
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	IEAGYVQTGDR	IEAGYVQTGDR	2	IEAGYVQTGDR2	44786.9	41957.1	51139
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	IEAIGGQQVCK	IEAIGGQQVC(UniMod:4)K	2	IEAIGGQQVC(UniMod:4)K2	420106	345984	319599
Q5FWT1	Q5FWT1	FA98A_RAT	Fam98a	Protein FAM98A	1	IEAINQAIANEYEVR	IEAINQAIANEYEVR	2	IEAINQAIANEYEVR2	10028.5	9135.55	11011
Q9WVR7	Q9WVR7	PPM1F_RAT	Ppm1f	Protein phosphatase 1F	1	IEALGGFVSLMDCWR	IEALGGFVSLMDC(UniMod:4)WR	2	IEALGGFVSLMDC(UniMod:4)WR2	3463.89		
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	IEALQADNDFTNER	IEALQADNDFTNER	2	IEALQADNDFTNER2	101896	95107.4	114493
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	IEALQADNDFTNER	IEALQADNDFTNER	3	IEALQADNDFTNER3	21353.5	18882.5	23813.6
P35434	P35434	ATPD_RAT	Atp5f1d	ATP synthase subunit delta, mitochondrial	1	IEANEALVK	IEANEALVK	2	IEANEALVK2	18979.5	27753.3	26522.8
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	IEANWDLFYYR	IEANWDLFYYR	2	IEANWDLFYYR2	4989.42		5225.93
Q9QYP1	Q9QYP1	LRP4_RAT	Lrp4	Low-density lipoprotein receptor-related protein 4	1	IEASSMDGSGR	IEASSMDGSGR	2	IEASSMDGSGR2	5698.55	4460.86	6408.89
P55146	P55146	TYRO3_RAT	Tyro3	Tyrosine-protein kinase receptor TYRO3	1	IEATLDSLGISDELKEK	IEATLDSLGISDELKEK	3	IEATLDSLGISDELKEK3	5789.67	8322.8	10537.2
Q68FQ7	Q68FQ7	RPAP3_RAT	Rpap3	RNA polymerase II-associated protein 3	1	IEAVGDSSAPQAQVDVK	IEAVGDSSAPQAQVDVK	2	IEAVGDSSAPQAQVDVK2	5829.84	4771.09	11734.2
Q68FQ7	Q68FQ7	RPAP3_RAT	Rpap3	RNA polymerase II-associated protein 3	1	IEAVGDSSAPQAQVDVK	IEAVGDSSAPQAQVDVK	3	IEAVGDSSAPQAQVDVK3	2163.49	6126.32	
F1LNS2	F1LNS2	F1LNS2_RAT	Dennd10	DENN domain containing 10	1	IEAVQEFTR	IEAVQEFTR	2	IEAVQEFTR2	12800.1	8784.99	21552.9
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	IECDDKGDGSCDVR	IEC(UniMod:4)DDKGDGSC(UniMod:4)DVR	2	IEC(UniMod:4)DDKGDGSC(UniMod:4)DVR2	284035		286022
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	IECDDKGDGSCDVR	IEC(UniMod:4)DDKGDGSC(UniMod:4)DVR	3	IEC(UniMod:4)DDKGDGSC(UniMod:4)DVR3	1.87749e+06	2.00487e+06	2.00426e+06
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	IECESPNR	IEC(UniMod:4)ESPNR	2	IEC(UniMod:4)ESPNR2	79179.9		49753
Q80ZF4	Q80ZF4	Q80ZF4_RAT	Mapkapk2	non-specific serine/threonine protein kinase	1	IEDASNPLLLK	IEDASNPLLLK	2	IEDASNPLLLK2	15645.5	11832.6	14912.2
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	IEDDMDGGDWSFCDGR	IEDDMDGGDWSFC(UniMod:4)DGR	2	IEDDMDGGDWSFC(UniMod:4)DGR2	122888	120366	116401
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	IEDDMDGGDWSFCDGR	IEDDMDGGDWSFC(UniMod:4)DGR	3	IEDDMDGGDWSFC(UniMod:4)DGR3	11301.7	12815.2	13869.1
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	IEDDSDMIR	IEDDSDMIR	2	IEDDSDMIR2	91757.7	96473.2	85345.9
Q9QY17	Q9QY17	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	1	IEDEDEQGWCK	IEDEDEQGWC(UniMod:4)K	2	IEDEDEQGWC(UniMod:4)K2	50002.8	49557.4	41847.5
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	IEDELKAEK	IEDELKAEK	2	IEDELKAEK2	12400.6	21329.5	14655.3
Q29RW1	Q29RW1	MYH4_RAT	Myh4	Myosin-4	1	IEDEQALGMQLQK	IEDEQALGMQLQK	2	IEDEQALGMQLQK2	11387.1	13224.8	9989.64
D3ZHV2	D3ZHV2;A0A8I5ZQD4	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	0	IEDEVTR	IEDEVTR	2	IEDEVTR2	98677.4	118347	129907
F7EUU4	F7EUU4	F7EUU4_RAT	Cops5	COP9 signalosome subunit 5	1	IEDFGVHCK	IEDFGVHC(UniMod:4)K	2	IEDFGVHC(UniMod:4)K2	10770.8	14904.5	7809.73
P29314	M0RB65;D3ZV50;P29314	RS9_RAT	Rps9	Small ribosomal subunit protein uS4	0	IEDFLER	IEDFLER	2	IEDFLER2	103452	98112.2	82374.5
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	IEDFLSELPDNTVLLLLNAIHFHGFWR	IEDFLSELPDNTVLLLLNAIHFHGFWR	4	IEDFLSELPDNTVLLLLNAIHFHGFWR4	2246.96		
Q63798	Q63798	PSME2_RAT	Psme2	Proteasome activator complex subunit 2	1	IEDGNDFGVAIQEK	IEDGNDFGVAIQEK	2	IEDGNDFGVAIQEK2	14617.1	5844.75	13708.8
A0A0G2JVP9	A0A0G2JVP9	A0A0G2JVP9_RAT	Psme1-ps1	Proteasome (prosome, macropain) activator subunit 1 (PA28 alpha), pseudogene 1	1	IEDGNNFGVAVQEK	IEDGNNFGVAVQEK	2	IEDGNNFGVAVQEK2	24007.7	33023.7	18768.4
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	IEDGVPQHLVLFLGGK	IEDGVPQHLVLFLGGK	3	IEDGVPQHLVLFLGGK3	19176.9	20410.9	20312.3
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	IEDLAAILPTEQPAAPEEDK	IEDLAAILPTEQPAAPEEDK	3	IEDLAAILPTEQPAAPEEDK3	182886	173727	181602
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	IEDLEEGQQVIR	IEDLEEGQQVIR	2	IEDLEEGQQVIR2	29746.2	32639.6	43674.6
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	IEDLEEGQQVIR	IEDLEEGQQVIR	3	IEDLEEGQQVIR3			1798.5
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	IEDLGAAMEEALILDNK	IEDLGAAMEEALILDNK	2	IEDLGAAMEEALILDNK2	79215.3	104371	84277.7
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	IEDLGAAMEEALILDNK	IEDLGAAMEEALILDNK	3	IEDLGAAMEEALILDNK3	25938.7	25713.9	29106.1
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	IEDLGDSMEEALILDIK	IEDLGDSMEEALILDIK	2	IEDLGDSMEEALILDIK2	5745.1	4669.62	5296.86
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	IEDLRSECSSDFGGK	IEDLRSEC(UniMod:4)SSDFGGK	3	IEDLRSEC(UniMod:4)SSDFGGK3	26537.4	26838.3	19912
M0R9L0	M0R9L0	M0R9L0_RAT	Naca	Nascent polypeptide associated complex subunit alpha	1	IEDLSQQAQLAAAEK	IEDLSQQAQLAAAEK	2	IEDLSQQAQLAAAEK2	72913.6	70146.7	79168.4
M0R9L0	M0R9L0	M0R9L0_RAT	Naca	Nascent polypeptide associated complex subunit alpha	1	IEDLSQQAQLAAAEK	IEDLSQQAQLAAAEK	3	IEDLSQQAQLAAAEK3	15215.7	29591.5	24701.8
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	IEDNFEDIITKPPVR	IEDNFEDIITKPPVR	3	IEDNFEDIITKPPVR3	78360.2	87678.7	86226.8
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	IEDNFEDIITKPPVRK	IEDNFEDIITKPPVRK	4	IEDNFEDIITKPPVRK4	16880.1	23758.6	29041.6
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	IEDPGSAK	IEDPGSAK	1	IEDPGSAK1	4808.48	2109.32	
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	IEDPGSAK	IEDPGSAK	2	IEDPGSAK2	131065	106117	102013
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	IEDPNQFVPLNTNPTEVLEK	IEDPNQFVPLNTNPTEVLEK	3	IEDPNQFVPLNTNPTEVLEK3	112609	109171	137806
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	IEDPNQFVPLNTNPTEVLEKR	IEDPNQFVPLNTNPTEVLEKR	3	IEDPNQFVPLNTNPTEVLEKR3	15375.3	19626.3	29330.4
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	IEDPSLLNSR	IEDPSLLNSR	2	IEDPSLLNSR2	6474.57	5112.8	6326.28
Q5FVH4	Q5FVH4	AKTIP_RAT	Aktip	AKT-interacting protein	1	IEDPYAISFSPWNPSVHDEAR	IEDPYAISFSPWNPSVHDEAR	3	IEDPYAISFSPWNPSVHDEAR3	11543.7	3266.6	7722
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	IEDPYSPR	IEDPYSPR	2	IEDPYSPR2	174675	166617	148550
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	IEDSFSLK	IEDSFSLK	2	IEDSFSLK2	790043	642129	651701
A0A8I6ASZ5	A0A8I6ASZ5	A0A8I6ASZ5_RAT	Tcf25	Transcription factor 25	1	IEDSSGFSHPGPPPLSSR	IEDSSGFSHPGPPPLSSR	3	IEDSSGFSHPGPPPLSSR3	11723.4	9753.56	10449.9
Q91XJ1	Q91XJ1	BECN1_RAT	Becn1	Beclin-1	1	IEDTGGSGGSYSIK	IEDTGGSGGSYSIK	2	IEDTGGSGGSYSIK2	7794.61	6072.34	5298.45
Q0Z843	Q0Z843	Q0Z843_RAT	Fig4	FIG4 phosphoinositide 5-phosphatase	1	IEDTSMIYIPNDSVR	IEDTSMIYIPNDSVR	2	IEDTSMIYIPNDSVR2	10235.2	5316.27	9836.61
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	IEDVGSDEEDDSGK	IEDVGSDEEDDSGK	2	IEDVGSDEEDDSGK2		3305.46	3890.88
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	IEDVGSDEEDDSGKDK	IEDVGSDEEDDSGKDK	2	IEDVGSDEEDDSGKDK2	11179.8	8088.28	4607.12
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	IEDVGSDEEDDSGKDK	IEDVGSDEEDDSGKDK	3	IEDVGSDEEDDSGKDK3	89118.4	101697	92415.7
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	IEDVGSDEEDDSGKDKK	IEDVGSDEEDDSGKDKK	3	IEDVGSDEEDDSGKDKK3	14336.4		16346.9
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	IEDVGSDEEDDSGKDKK	IEDVGSDEEDDSGKDKK	4	IEDVGSDEEDDSGKDKK4	20272		18087
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	IEDVLPFFPDFVTIDHFK	IEDVLPFFPDFVTIDHFK	3	IEDVLPFFPDFVTIDHFK3	6853.75	3057.94	6638.54
P13471	P13471	RS14_RAT	Rps14	Small ribosomal subunit protein uS11	1	IEDVTPIPSDSTR	IEDVTPIPSDSTR	2	IEDVTPIPSDSTR2	62216.9	44879.4	36241
Q63803	Q63803	GNAS1_RAT	Gnas	Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas	1	IEDYFPEFAR	IEDYFPEFAR	2	IEDYFPEFAR2	220806	210459	250083
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	IEEACEIYAR	IEEAC(UniMod:4)EIYAR	2	IEEAC(UniMod:4)EIYAR2	167467	120249	154767
Q9EPJ3	Q9EPJ3	RT26_RAT	Mrps26	Small ribosomal subunit protein mS26	1	IEEALDSPK	IEEALDSPK	2	IEEALDSPK2	7562.79		16396
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	IEEALQK	IEEALQK	2	IEEALQK2	62982		43567.1
A0A096MKE0	A0A096MKE0	A0A096MKE0_RAT	Asph	Aspartate-beta-hydroxylase	1	IEEAVSAFEELVR	IEEAVSAFEELVR	2	IEEAVSAFEELVR2	8526.4	7824.92	5642.26
D3ZUV2	D3ZUV2	D3ZUV2_RAT	Mib1	RING-type E3 ubiquitin transferase	1	IEECVVCSDK	IEEC(UniMod:4)VVC(UniMod:4)SDK	2	IEEC(UniMod:4)VVC(UniMod:4)SDK2	2186.91		
Q6MGD0	Q6MGD0	CUTA_RAT	Cuta	Protein CutA	1	IEEDSEVLMMIK	IEEDSEVLMMIK	2	IEEDSEVLMMIK2	9144.67	5911.43	5019.94
A0A8I6ACY9	A0A8I6ACY9	A0A8I6ACY9_RAT	Vps37b	VPS37B subunit of ESCRT-I	1	IEEDTENMAEK	IEEDTENMAEK	2	IEEDTENMAEK2	25344.8	24617.2	15463.2
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	IEEEEQEPEPPEPFEYIDD	IEEEEQEPEPPEPFEYIDD	3	IEEEEQEPEPPEPFEYIDD3	12699.1		10050.6
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	IEEEKPDCTK	IEEEKPDC(UniMod:4)TK	2	IEEEKPDC(UniMod:4)TK2			2847.94
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	IEEELAALQK	IEEELAALQK	2	IEEELAALQK2	189406	202133	192759
P04764	M0R5J4;A0A8I6GJ97;P04764;A0A8I5YC61	ENOA_RAT	Eno1	Alpha-enolase	0	IEEELGSK	IEEELGSK	1	IEEELGSK1	4029.61	2397.8	4227.89
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	IEEEMLALQNER	IEEEMLALQNER	2	IEEEMLALQNER2	31444.4	35115.6	32293
B5DFF4	B5DFF4	B5DFF4_RAT	Vps37c	VPS37C subunit of ESCRT-I	1	IEEESEAMAEK	IEEESEAMAEK	2	IEEESEAMAEK2	3413.47	4099.77	5292.1
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	IEEEVEACK	IEEEVEAC(UniMod:4)K	2	IEEEVEAC(UniMod:4)K2	20142.5	14891.6	12169
Q6MG61	Q6MG61	CLIC1_RAT	Clic1	Chloride intracellular channel protein 1	1	IEEFLEAVLCPPR	IEEFLEAVLC(UniMod:4)PPR	2	IEEFLEAVLC(UniMod:4)PPR2	110048	84508.7	70371.9
Q6MG61	Q6MG61	CLIC1_RAT	Clic1	Chloride intracellular channel protein 1	1	IEEFLEAVLCPPR	IEEFLEAVLC(UniMod:4)PPR	3	IEEFLEAVLC(UniMod:4)PPR3	108508	88251.1	81949
Q6MG61	Q6MG61	CLIC1_RAT	Clic1	Chloride intracellular channel protein 1	1	IEEFLEAVLCPPRYPK	IEEFLEAVLC(UniMod:4)PPRYPK	3	IEEFLEAVLC(UniMod:4)PPRYPK3	10109.9		8428.33
Q9Z0W7	Q9Z0W7	CLIC4_RAT	Clic4	Chloride intracellular channel protein 4	1	IEEFLEEVLCPPK	IEEFLEEVLC(UniMod:4)PPK	2	IEEFLEEVLC(UniMod:4)PPK2	115642	79653.7	104096
Q9Z0W7	Q9Z0W7	CLIC4_RAT	Clic4	Chloride intracellular channel protein 4	1	IEEFLEEVLCPPK	IEEFLEEVLC(UniMod:4)PPK	3	IEEFLEEVLC(UniMod:4)PPK3	47276.2	30300.8	48984
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	IEEFLSSFEEK	IEEFLSSFEEK	2	IEEFLSSFEEK2	37527.1	36382	48012.4
Q6AYE2	Q6AYE2	SHLB1_RAT	Sh3glb1	Endophilin-B1	1	IEEFVYEK	IEEFVYEK	2	IEEFVYEK2	72098.5	71805.3	96046.1
B5DEH2	B5DEH2	ERLN2_RAT	Erlin2	Erlin-2	1	IEEGHIGVYYR	IEEGHIGVYYR	3	IEEGHIGVYYR3	14030.5	6697.7	16897.3
O70377	O70377;P60881	SNP23_RAT	Snap23	Synaptosomal-associated protein 23	0	IEEGMDQINK	IEEGMDQINK	2	IEEGMDQINK2	502679	436856	533754
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	IEEGVPQLLIVLTAER	IEEGVPQLLIVLTAER	3	IEEGVPQLLIVLTAER3	865.754	3308.06	2470.2
Q5PQX0	Q5PQX0	UXS1_RAT	Uxs1	UDP-glucuronic acid decarboxylase 1	1	IEEIIEPLR	IEEIIEPLR	2	IEEIIEPLR2	36128.6	21194	32270.5
Q5PQX0	Q5PQX0	UXS1_RAT	Uxs1	UDP-glucuronic acid decarboxylase 1	1	IEEIIEPLREK	IEEIIEPLREK	2	IEEIIEPLREK2	3860.62	7484.75	
Q5PQX0	Q5PQX0	UXS1_RAT	Uxs1	UDP-glucuronic acid decarboxylase 1	1	IEEIIEPLREK	IEEIIEPLREK	3	IEEIIEPLREK3	29442	51811.9	36687.2
G3V8Y8	G3V8Y8	G3V8Y8_RAT	Hip1	Huntingtin interacting protein 1	1	IEEILSK	IEEILSK	2	IEEILSK2	15778.1		13047.9
Q29RW1	P12847;Q29RW1	MYH4_RAT	Myh4	Myosin-4	0	IEELEEEIEAER	IEELEEEIEAER	2	IEELEEEIEAER2	10722	15769.2	12753.3
P02564	P02563;P02564	MYH7_RAT	Myh7	Myosin-7	0	IEELEEELEAER	IEELEEELEAER	2	IEELEEELEAER2	25785.5		
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	IEELENLLQQGGSGVTVTDHSK	IEELENLLQQGGSGVTVTDHSK	3	IEELENLLQQGGSGVTVTDHSK3	7561.37	7325.93	6035.64
Q5XI83	Q5XI83	VP35L_RAT	Vps35l	VPS35 endosomal protein-sorting factor-like	1	IEELNQSLK	IEELNQSLK	2	IEELNQSLK2	9611.48	6645.64	9617.81
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	IEELQEALR	IEELQEALR	2	IEELQEALR2	17062.5	21563.3	41312.2
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	IEELQEALRK	IEELQEALRK	3	IEELQEALRK3	22130.4	36487.7	21126.7
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	IEELQLIVNDK	IEELQLIVNDK	2	IEELQLIVNDK2	107402	78036.6	86030.9
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	IEELQQR	IEELQQR	2	IEELQQR2	23622.5	23952.7	31987.5
A0A8I5ZVX1	A0A8I5ZVX1	A0A8I5ZVX1_RAT	Ppfibp2	PPFIA binding protein 2	1	IEELTGLLNQYLR	IEELTGLLNQYLR	2	IEELTGLLNQYLR2	8284.92	1956.5	1088.22
Q63556	Q63556	SPA3M_RAT	Serpina3m	Serine protease inhibitor A3M (Fragment)	1	IEELTTPYFR	IEELTTPYFR	2	IEELTTPYFR2	56217.5	47951.8	42182.2
Q63556	Q63556	SPA3M_RAT	Serpina3m	Serine protease inhibitor A3M (Fragment)	1	IEELTTPYFRDEELSCSVLELK	IEELTTPYFRDEELSC(UniMod:4)SVLELK	3	IEELTTPYFRDEELSC(UniMod:4)SVLELK3	181558	159539	157970
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	IEELYASLER	IEELYASLER	2	IEELYASLER2	9514.38	10248.4	5351.44
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	IEEMEMTNSHLAK	IEEMEMTNSHLAK	2	IEEMEMTNSHLAK2	39433.9	45654.4	44650.9
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	IEEMEMTNSHLAK	IEEMEMTNSHLAK	3	IEEMEMTNSHLAK3	283916	291691	335964
P02761	M0R8N5;A0A8I6ANP0;M0R620;P02761;Q78E14	MUP_RAT		Major urinary protein	0	IEENGSMR	IEENGSMR	2	IEENGSMR2	307792	207623	238315
A0A8I6ANT5	A0A8I6ANT5	A0A8I6ANT5_RAT	Tpt1-ps1	Similar to tumor protein, translationally-controlled 1	1	IEEQKPER	IEEQKPER	2	IEEQKPER2			25502.2
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	IEETDCK	IEETDC(UniMod:4)K	2	IEETDC(UniMod:4)K2			31202.1
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	IEETNRPLK	IEETNRPLK	2	IEETNRPLK2	5847.03	8695.94	7396.03
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	IEETNRPLKK	IEETNRPLKK	2	IEETNRPLKK2			4165.11
Q68FY0	Q68FY0	QCR1_RAT	Uqcrc1	Cytochrome b-c1 complex subunit 1, mitochondrial	1	IEEVDAQMVR	IEEVDAQMVR	2	IEEVDAQMVR2	343068	310673	372889
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	IEEVLMTAQAVEEER	IEEVLMTAQAVEEER	2	IEEVLMTAQAVEEER2	5644	7094.08	6569.22
O70467	O70467	ANM3_RAT	Prmt3	Protein arginine N-methyltransferase 3	1	IEEVSLPVEK	IEEVSLPVEK	2	IEEVSLPVEK2	22165	21367.9	22877.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	IEFDWNTGTNVDTK	IEFDWNTGTNVDTK	2	IEFDWNTGTNVDTK2	153055	158025	161105
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	IEFDWNTGTNVDTKK	IEFDWNTGTNVDTKK	2	IEFDWNTGTNVDTKK2	27343.6	52462.6	44087.8
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	IEFDWNTGTNVDTKK	IEFDWNTGTNVDTKK	3	IEFDWNTGTNVDTKK3	379212	527405	440993
A0A0G2K8I0	A0A0G2K8I0	A0A0G2K8I0_RAT	Sh3bgrl2	SH3 domain-binding glutamic acid-rich-like protein	1	IEFEEVDITMSEEQR	IEFEEVDITMSEEQR	2	IEFEEVDITMSEEQR2	9019.91	3475.92	7426.57
Q63184	Q63184	E2AK2_RAT	Eif2ak2	Interferon-induced, double-stranded RNA-activated protein kinase	1	IEFFQLLR	IEFFQLLR	2	IEFFQLLR2	10084.2	7718.63	8870.73
Q3KR59	Q3KR59	UBP10_RAT	Usp10	Ubiquitin carboxyl-terminal hydrolase 10	1	IEFGVDEVIEPSDGLQR	IEFGVDEVIEPSDGLQR	2	IEFGVDEVIEPSDGLQR2	10313	2518.07	6729.81
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	IEFHNEVDGAK	IEFHNEVDGAK	2	IEFHNEVDGAK2	6027.81	5890.4	9028.47
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	IEFHNEVDGAK	IEFHNEVDGAK	3	IEFHNEVDGAK3	58497.2	74681.2	58650.3
P15127	P15127;P24062	INSR_RAT	Insr	Insulin receptor	0	IEFLNEASVMK	IEFLNEASVMK	2	IEFLNEASVMK2	8415.1	8392.12	10036.4
P83953	Q56R16;P83953;A0A0G2JZS1	IMA5_RAT	Kpna1	Importin subunit alpha-5	0	IEFLQSHENQEIYQK	IEFLQSHENQEIYQK	2	IEFLQSHENQEIYQK2	12515.4	15937	10243.7
P83953	Q56R16;P83953;A0A0G2JZS1	IMA5_RAT	Kpna1	Importin subunit alpha-5	0	IEFLQSHENQEIYQK	IEFLQSHENQEIYQK	3	IEFLQSHENQEIYQK3	276862	316346	317603
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	IEFPLPDEK	IEFPLPDEK	2	IEFPLPDEK2	43141.7	53351.1	47433.4
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	IEFPLPDR	IEFPLPDR	2	IEFPLPDR2	25277.9		13665.8
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	IEFPLPDRR	IEFPLPDRR	3	IEFPLPDRR3	77801.4	70316.9	72147.1
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	IEFPMPNEEAR	IEFPMPNEEAR	2	IEFPMPNEEAR2	78557.5	50029.4	63316.1
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	IEFPPPNEEAR	IEFPPPNEEAR	2	IEFPPPNEEAR2	36926.2	33223.3	37686.4
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	IEFQPPEAK	IEFQPPEAK	2	IEFQPPEAK2	318686	329458	314523
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	IEFSLPDLEGR	IEFSLPDLEGR	2	IEFSLPDLEGR2	141319	132011	143641
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	IEFTFER	IEFTFER	2	IEFTFER2	140165	136916	155049
D4AD89	D4AD89	D4AD89_RAT	Sez6l	Seizure related 6 homolog like	1	IEFTSDQGQAASAFNIR	IEFTSDQGQAASAFNIR	2	IEFTSDQGQAASAFNIR2	2621.1		721.456
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	IEFVLDNSVR	IEFVLDNSVR	2	IEFVLDNSVR2	86433	56790.5	70746.6
F7F1X7	F7F1X7	F7F1X7_RAT	Pmm2	Phosphomannomutase	1	IEFYELDK	IEFYELDK	2	IEFYELDK2	19946.5	18742.1	20136.1
F7F1X7	F7F1X7	F7F1X7_RAT	Pmm2	Phosphomannomutase	1	IEFYELDKK	IEFYELDKK	3	IEFYELDKK3	3733.68		
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	IEGCHICTSVTPGEPQVFLGK	IEGC(UniMod:4)HIC(UniMod:4)TSVTPGEPQVFLGK	3	IEGC(UniMod:4)HIC(UniMod:4)TSVTPGEPQVFLGK3	28875.7	38470.7	33901.3
P09895	A0A8I6AAE6;P09895	RL5_RAT	Rpl5	Large ribosomal subunit protein uL18	0	IEGDMIVCAAYAHELPK	IEGDMIVC(UniMod:4)AAYAHELPK	3	IEGDMIVC(UniMod:4)AAYAHELPK3	8990.05	14499.6	9012.92
Q5XI81	Q5XI81	FXR1_RAT	Fxr1	RNA-binding protein FXR1	1	IEGDNENKLPR	IEGDNENKLPR	3	IEGDNENKLPR3	44562.5	35280.1	20527.4
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	IEGDPQGVQQAK	IEGDPQGVQQAK	2	IEGDPQGVQQAK2	40608.5	37737.5	32909.3
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	IEGEGSVLQAK	IEGEGSVLQAK	2	IEGEGSVLQAK2	312798	272430	279201
Q1H5H1	Q1H5H1	SELT_RAT	Selenot	Thioredoxin reductase-like selenoprotein T	1	IEGENYLPQPIYR	IEGENYLPQPIYR	2	IEGENYLPQPIYR2	23832	22217.5	24540.7
Q1H5H1	Q1H5H1	SELT_RAT	Selenot	Thioredoxin reductase-like selenoprotein T	1	IEGENYLPQPIYR	IEGENYLPQPIYR	3	IEGENYLPQPIYR3	9854.59	9102.21	5046.46
Q5HZV9	Q5HZV9	PP1R7_RAT	Ppp1r7	Protein phosphatase 1 regulatory subunit 7	1	IEGFEVLK	IEGFEVLK	2	IEGFEVLK2	126623	134086	128575
Q5HZV9	Q5HZV9	PP1R7_RAT	Ppp1r7	Protein phosphatase 1 regulatory subunit 7	1	IEGFEVLKK	IEGFEVLKK	2	IEGFEVLKK2	9784.32	11670.5	5745.85
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	IEGFLDIMEIK	IEGFLDIMEIK	2	IEGFLDIMEIK2	41959.1	36690.9	30528.8
Q9Z254	Q9Z254	GIPC1_RAT	Gipc1	PDZ domain-containing protein GIPC1	1	IEGFTNVK	IEGFTNVK	2	IEGFTNVK2	34535.9	54705.5	32925.7
Q5PQP2	Q5PQP2	RCAS1_RAT	Ebag9	Receptor-binding cancer antigen expressed on SiSo cells	1	IEGGTGNAAAQQNSLEQLEPDYFK	IEGGTGNAAAQQNSLEQLEPDYFK	3	IEGGTGNAAAQQNSLEQLEPDYFK3	12913.3	10512.7	8985.18
A0A0G2K3L8	A0A0G2K3L8	A0A0G2K3L8_RAT	Wdfy1	WD repeat and FYVE domain containing 1	1	IEGHQDAVTAALLIPK	IEGHQDAVTAALLIPK	3	IEGHQDAVTAALLIPK3	11773	8257.17	12181.4
Q64380	Q64380	SARDH_RAT	Sardh	Sarcosine dehydrogenase, mitochondrial	1	IEGIQNMPNVR	IEGIQNMPNVR	2	IEGIQNMPNVR2	6953.16	5542.95	7546.45
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	IEGLDIHFIHVKPPQLPSGR	IEGLDIHFIHVKPPQLPSGR	4	IEGLDIHFIHVKPPQLPSGR4	33907.2	34093.8	32680.5
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	IEGLDSEMIMKPLVTEINAK	IEGLDSEMIMKPLVTEINAK	3	IEGLDSEMIMKPLVTEINAK3	34020.2	37715.5	38724.4
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	IEGLLAAFPK	IEGLLAAFPK	2	IEGLLAAFPK2	152143	143418	151089
Q5HZV9	Q5HZV9	PP1R7_RAT	Ppp1r7	Protein phosphatase 1 regulatory subunit 7	1	IEGLQNLVNLR	IEGLQNLVNLR	2	IEGLQNLVNLR2	124849	137296	117230
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	IEGNLVFDPSSYLPK	IEGNLVFDPSSYLPK	2	IEGNLVFDPSSYLPK2	1.87014e+06	2.34339e+06	1.93306e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	IEGNLVFDPSSYLPK	IEGNLVFDPSSYLPK	3	IEGNLVFDPSSYLPK3	15692.7	17295.2	18086.4
P01026	P01026	CO3_RAT	C3	Complement C3	1	IEGNQGAR	IEGNQGAR	2	IEGNQGAR2			406408
P52873	P52873	PYC_RAT	Pc	Pyruvate carboxylase, mitochondrial	1	IEGRPGASLPPLNLK	IEGRPGASLPPLNLK	3	IEGRPGASLPPLNLK3	11451.3	13674.1	12998.6
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	IEGSGDQVDTLELSGGAR	IEGSGDQVDTLELSGGAR	2	IEGSGDQVDTLELSGGAR2	4664.77	3165.78	1911.1
A0A8I5Y9A4	A0A8I5Y9A4;M0RA24;A0A8I6A1W0	A0A8I5Y9A4_RAT	Ndufb3	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3	0	IEGTPLEAMQK	IEGTPLEAMQK	2	IEGTPLEAMQK2	146462	135033	134481
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	IEGTTAASTYVFVR	IEGTTAASTYVFVR	2	IEGTTAASTYVFVR2	108418	87627.3	70215.1
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	IEGTTAASTYVFVR	IEGTTAASTYVFVR	3	IEGTTAASTYVFVR3	13731.3	11034.7	13083.8
P04646	D4A771;F1M0T2;A0A8L2QNQ0;A0A8L2QQD7;P04646;A0A096P6M4;A0A8I5ZW32;D3ZZN4;A0A8I6A5U8	RL35A_RAT	Rpl35a	Large ribosomal subunit protein eL33	0	IEGVYAR	IEGVYAR	2	IEGVYAR2	48229.8	72771.9	97365.5
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	IEGWLSVPNR	IEGWLSVPNR	2	IEGWLSVPNR2	42223.5	40065.8	42949.5
B2GUZ5	B2GUZ5	CAZA1_RAT	Capza1	F-actin-capping protein subunit alpha-1	1	IEGYDDQVLITEHGDLGNSR	IEGYDDQVLITEHGDLGNSR	3	IEGYDDQVLITEHGDLGNSR3	144570	123724	151675
Q3T1K5	Q3T1K5	CAZA2_RAT	Capza2	F-actin-capping protein subunit alpha-2	1	IEGYEDQVLITEHGDLGNGK	IEGYEDQVLITEHGDLGNGK	3	IEGYEDQVLITEHGDLGNGK3	8849.41	7791.84	7883.2
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	IEGYPDPEVVWFK	IEGYPDPEVVWFK	2	IEGYPDPEVVWFK2	769944	810350	807397
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	IEGYPDPEVVWFK	IEGYPDPEVVWFK	3	IEGYPDPEVVWFK3	5807.35	3707.67	7944.94
Q498T9	Q3KRC6;Q498T9;A0A8I5Y5H2	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	0	IEHFISILGK	IEHFISILGK	3	IEHFISILGK3	13011.6	15332.4	7363.51
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	IEHGSIK	IEHGSIK	1	IEHGSIK1			4615.87
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	IEHGSIK	IEHGSIK	2	IEHGSIK2			35900.6
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	IEHSFEVK	IEHSFEVK	2	IEHSFEVK2	3.28608e+06	2.64134e+06	2.22236e+06
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	IEHSFEVKEYVLPK	IEHSFEVKEYVLPK	3	IEHSFEVKEYVLPK3	5506.87	2841.91	2984.8
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	IEHSFEVKEYVLPK	IEHSFEVKEYVLPK	4	IEHSFEVKEYVLPK4	4218.16	3353.73	2499.77
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	IEIAEAIPAEGLVSILK	IEIAEAIPAEGLVSILK	2	IEIAEAIPAEGLVSILK2	101964	92549.2	98108.5
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	IEIAEAIPAEGLVSILK	IEIAEAIPAEGLVSILK	3	IEIAEAIPAEGLVSILK3	10348.8	14322.5	11502.2
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	IEIAEAIPAEGLVSILKK	IEIAEAIPAEGLVSILKK	3	IEIAEAIPAEGLVSILKK3	14482.1	18516.8	20488.2
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	IEIDIPLPLGGK	IEIDIPLPLGGK	2	IEIDIPLPLGGK2	1.61457e+06	1.66705e+06	1.52091e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	IEIDIPLPLGGK	IEIDIPLPLGGK	3	IEIDIPLPLGGK3	9060.93	20993.6	8886.68
Q5RJR2	Q5RJR2	TWF1_RAT	Twf1	Twinfilin-1	1	IEIDNGDELTADFLYDEVHPK	IEIDNGDELTADFLYDEVHPK	3	IEIDNGDELTADFLYDEVHPK3	26077.3	21472.7	23243.6
P52759	P52759	RIDA_RAT	Rida	2-iminobutanoate/2-iminopropanoate deaminase	1	IEIEAIAVQGPFTTAGL	IEIEAIAVQGPFTTAGL	2	IEIEAIAVQGPFTTAGL2	1353.4		3308.03
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	IEIEQNYAK	IEIEQNYAK	2	IEIEQNYAK2	267357	264802	289277
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	IEIESFFEGEDFSETLTR	IEIESFFEGEDFSETLTR	3	IEIESFFEGEDFSETLTR3	87996.4	81496.4	79564.5
B0BMY7	B0BMY7	B0BMY7_RAT	Twf2	Twinfilin actin-binding protein 2	1	IEIGDGAELTAEFLYDEVHPK	IEIGDGAELTAEFLYDEVHPK	3	IEIGDGAELTAEFLYDEVHPK3	10279.1	4352.41	11155.4
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	IEIGPEPTLFGK	IEIGPEPTLFGK	2	IEIGPEPTLFGK2	8044.23	6545.42	7971.08
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	IEIGPEPTLFGKPK	IEIGPEPTLFGKPK	2	IEIGPEPTLFGKPK2	13871	12823.6	14014.7
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	IEIGPEPTLFGKPK	IEIGPEPTLFGKPK	3	IEIGPEPTLFGKPK3	98328.4	118593	132617
D3ZYR1	D3ZYR1	FCHO2_RAT	Fcho2	F-BAR domain only protein 2	1	IEIKPVHPNNVHHTMASLDELK	IEIKPVHPNNVHHTMASLDELK	4	IEIKPVHPNNVHHTMASLDELK4	3148.58	7395.98	8678.85
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	IEILCASCSALR	IEILC(UniMod:4)ASC(UniMod:4)SALR	2	IEILC(UniMod:4)ASC(UniMod:4)SALR2	115399	98452.8	98481.4
D3Z8W5	D3Z8W5	D3Z8W5_RAT	Ube2l3	Ube2l3 protein	1	IEINFPAEYPFKPPK	IEINFPAEYPFKPPK	3	IEINFPAEYPFKPPK3	45196.6	37901.4	54578.6
A0A8I5ZL63	D3ZUJ7;A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	0	IEIPLFHVLNAR	IEIPLFHVLNAR	2	IEIPLFHVLNAR2	13994.5	11022.1	15736.9
A0A8I5ZL63	D3ZUJ7;A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	0	IEIPLFHVLNAR	IEIPLFHVLNAR	3	IEIPLFHVLNAR3	101149	74575.8	86774.4
B2RYM5	B2RYM5	BRCC3_RAT	Brcc3	Lys-63-specific deubiquitinase BRCC36	1	IEIPVHVVPHVTIGK	IEIPVHVVPHVTIGK	3	IEIPVHVVPHVTIGK3	35396.3	23633.3	33587.3
B2RYM5	B2RYM5	BRCC3_RAT	Brcc3	Lys-63-specific deubiquitinase BRCC36	1	IEIPVHVVPHVTIGK	IEIPVHVVPHVTIGK	4	IEIPVHVVPHVTIGK4	43041.3	39468.3	58450.5
O35397	O35397	CASP6_RAT	Casp6	Caspase-6	1	IEIQTLTGLFK	IEIQTLTGLFK	2	IEIQTLTGLFK2	24727.6	25096.4	19455.5
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	IEISPEYK	IEISPEYK	1	IEISPEYK1		3197.85	
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	IEISPEYK	IEISPEYK	2	IEISPEYK2	357542	375180	387447
Q7TQM5	Q7TQM5	KPRP_RAT	Kprp	Keratinocyte proline-rich protein	1	IEISSPCCPR	IEISSPC(UniMod:4)C(UniMod:4)PR	2	IEISSPC(UniMod:4)C(UniMod:4)PR2	13815.2	9630.27	30472.8
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	IEISTEAITLSSGSSTSR	IEISTEAITLSSGSSTSR	2	IEISTEAITLSSGSSTSR2	12660	11349.2	8962.54
A0A8I6AAD8	A0A8I6AAD8	A0A8I6AAD8_RAT	Snx4	Sorting nexin 4	1	IEISVSEAEK	IEISVSEAEK	2	IEISVSEAEK2	8032.13	6936.92	7327.94
A0A8I6AAD8	A0A8I6AAD8	A0A8I6AAD8_RAT	Snx4	Sorting nexin 4	1	IEISVSEAEKR	IEISVSEAEKR	3	IEISVSEAEKR3	8465.33		
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	IEITSVDLFLGSESGR	IEITSVDLFLGSESGR	2	IEITSVDLFLGSESGR2	6090.75	7390.24	11625.7
P61983	P61983	1433G_RAT	Ywhag	14-3-3 protein gamma	1	IEKELEAVCQDVLSLLDNYLIK	IEKELEAVC(UniMod:4)QDVLSLLDNYLIK	3	IEKELEAVC(UniMod:4)QDVLSLLDNYLIK3	8929.26		
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	IEKELETVCNDVLALLDK	IEKELETVC(UniMod:4)NDVLALLDK	3	IEKELETVC(UniMod:4)NDVLALLDK3	54823.3	82876	50107.5
Q4V897	Q4V897	CC90B_RAT	Ccdc90b	Coiled-coil domain-containing protein 90B, mitochondrial	1	IELDQVK	IELDQVK	2	IELDQVK2	44546.2	33018.1	45128.2
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	IELENYR	IELENYR	2	IELENYR2	40104.2		41149.7
D4AEK9	D4AEK9	D4AEK9_RAT	Ccdc6	Coiled-coil domain containing 6	1	IELETYK	IELETYK	2	IELETYK2	100333	101410	108083
Q6P9U3	Q6P9U3	COMD3_RAT	Commd3	COMM domain-containing protein 3	1	IELFCTEYQNNK	IELFC(UniMod:4)TEYQNNK	2	IELFC(UniMod:4)TEYQNNK2	4169.31		6223.66
Q5I0H9	Q5I0H9	PDIA5_RAT	Pdia5	Protein disulfide-isomerase A5	1	IELFHYQDGAFHMQYDR	IELFHYQDGAFHMQYDR	3	IELFHYQDGAFHMQYDR3	8113.41	6179.94	
Q5I0H9	Q5I0H9	PDIA5_RAT	Pdia5	Protein disulfide-isomerase A5	1	IELFHYQDGAFHMQYDR	IELFHYQDGAFHMQYDR	4	IELFHYQDGAFHMQYDR4	10691.4	12137	5790.28
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	IELFVGGELIDPGDDRK	IELFVGGELIDPGDDRK	3	IELFVGGELIDPGDDRK3	92508.9	94074.4	70453.7
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	IELGLLYEEK	IELGLLYEEK	2	IELGLLYEEK2	4378.33	6727.64	5910.44
P41498	P41498	PPAC_RAT	Acp1	Low molecular weight phosphotyrosine protein phosphatase	1	IELLGSYDPQK	IELLGSYDPQK	2	IELLGSYDPQK2	35456.5	32687.2	38494
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	IELMDWEGNR	IELMDWEGNR	2	IELMDWEGNR2	204427	183653	216246
Q68FP9	Q68FP9	COG6_RAT	Cog6	Conserved oligomeric Golgi complex subunit 6	1	IELPPPDLGPSSALSQTLTLLR	IELPPPDLGPSSALSQTLTLLR	3	IELPPPDLGPSSALSQTLTLLR3	4453.41		
P15127	P15127	INSR_RAT	Insr	Insulin receptor	1	IELQACNQDSPEER	IELQAC(UniMod:4)NQDSPEER	2	IELQAC(UniMod:4)NQDSPEER2	3139.78	1965.18	
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	IELQMTLDSK	IELQMTLDSK	2	IELQMTLDSK2	31471.1	33919.4	31748.9
A0A0G2K4Y6	A0A0G2K4Y6	A0A0G2K4Y6_RAT	Haus6	Family with sequence similarity 29, member A	1	IELSPVAK	IELSPVAK	2	IELSPVAK2	8089.22	5958.32	6584.05
A0A8I6A502	A0A8I6A502	A0A8I6A502_RAT	Tns3	Tensin 3	1	IELVFSATPEK	IELVFSATPEK	2	IELVFSATPEK2	12786.9	19328.3	14429.6
D3ZLZ7	D3ZLZ7	IMDH1_RAT	Impdh1	Inosine-5'-monophosphate dehydrogenase 1	1	IELVVAPAGVTLK	IELVVAPAGVTLK	2	IELVVAPAGVTLK2	9563.62	11223.6	6618.13
Q8VHV8	Q8VHV8	SELS_RAT	Selenos	Selenoprotein S	1	IEMWDSMQEGR	IEMWDSMQEGR	2	IEMWDSMQEGR2	3982.81	2034.4	11363.1
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	IEMWSYAAK	IEMWSYAAK	2	IEMWSYAAK2	43929.2	41137.7	55219.8
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	IENANLIPPVPDDK	IENANLIPPVPDDK	2	IENANLIPPVPDDK2	5.48487e+06	5.76068e+06	6.42944e+06
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	IENANLIPPVPDDK	IENANLIPPVPDDK	3	IENANLIPPVPDDK3	400224	500491	473825
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	IENANLIPPVPDDKFQDLLDAVWADK	IENANLIPPVPDDKFQDLLDAVWADK	3	IENANLIPPVPDDKFQDLLDAVWADK3	6.79273e+06	7.09097e+06	7.01019e+06
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	IENANLIPPVPDDKFQDLLDAVWADK	IENANLIPPVPDDKFQDLLDAVWADK	4	IENANLIPPVPDDKFQDLLDAVWADK4	219908	184070	205031
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	IENDKFIYK	IENDKFIYK	2	IENDKFIYK2	53905.7	47429.6	45150.6
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	IENDKFIYK	IENDKFIYK	3	IENDKFIYK3	296187	401740	371219
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	IENDWKR	IENDWKR	2	IENDWKR2	4791.45	6975.02	7834.45
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	IENEEVK	IENEEVK	2	IENEEVK2	9312.05		15955.5
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	IENEEVKK	IENEEVKK	2	IENEEVKK2			8043.97
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	IENEEVRK	IENEEVRK	2	IENEEVRK2			10929.6
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	IENELKEINTNQEALK	IENELKEINTNQEALK	3	IENELKEINTNQEALK3		11344.9	7597.1
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	IENELKEINTNQEALKR	IENELKEINTNQEALKR	4	IENELKEINTNQEALKR4	2047.33	3606.66	4033.35
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	IENIHVGGK	IENIHVGGK	2	IENIHVGGK2	31183.8	20459.1	19063.2
Q5HZV9	Q5HZV9	PP1R7_RAT	Ppp1r7	Protein phosphatase 1 regulatory subunit 7	1	IENISTLQQLQMLELGSNR	IENISTLQQLQMLELGSNR	3	IENISTLQQLQMLELGSNR3	40001.9	49642.2	42038.2
P33124	P33124	ACSL6_RAT	Acsl6	Long-chain-fatty-acid--CoA ligase 6	1	IENIYIR	IENIYIR	2	IENIYIR2	28358.3	25239.9	28013.8
A0A8I6A356	A0A8I6A356	A0A8I6A356_RAT	Ube2k	E2 ubiquitin-conjugating enzyme	1	IENLCAMGFDR	IENLC(UniMod:4)AMGFDR	2	IENLC(UniMod:4)AMGFDR2	8790.29		5569.34
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	IENLDPR	IENLDPR	2	IENLDPR2	70700.6	75528.1	101235
Q811U3	Q8K3M6;Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	0	IENLQEQLR	IENLQEQLR	2	IENLQEQLR2	9204.73		6696.26
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	IENLTEDAFNTQVTALIK	IENLTEDAFNTQVTALIK	3	IENLTEDAFNTQVTALIK3	5193.4	6455.66	6117.52
A0A8I6ANL9	A0A8I6ANL9	A0A8I6ANL9_RAT	Cdc23	Cell division cycle 23	1	IENMDTFSNLLYVR	IENMDTFSNLLYVR	2	IENMDTFSNLLYVR2	7169.26	7781.14	5002.66
Q9QWJ9	Q9QWJ9	NRP1_RAT	Nrp1	Neuropilin-1	1	IENPGYLTSPGYPHSYHPSEK	IENPGYLTSPGYPHSYHPSEK	3	IENPGYLTSPGYPHSYHPSEK3	4200.57	2353.4	
Q9QWJ9	Q9QWJ9	NRP1_RAT	Nrp1	Neuropilin-1	1	IENPGYLTSPGYPHSYHPSEK	IENPGYLTSPGYPHSYHPSEK	4	IENPGYLTSPGYPHSYHPSEK4	10291.9	10878.3	10437.2
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	IENPMTPGHGGSGYWR	IENPMTPGHGGSGYWR	2	IENPMTPGHGGSGYWR2	1.27355e+06	775109	1.01695e+06
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	IENPMTPGHGGSGYWR	IENPMTPGHGGSGYWR	3	IENPMTPGHGGSGYWR3	1.07631e+07	8.53504e+06	9.80399e+06
Q3B7D5	Q3B7D5	RASF2_RAT	Rassf2	Ras association domain-containing protein 2	1	IENSAEEFALYVVHTSGEK	IENSAEEFALYVVHTSGEK	3	IENSAEEFALYVVHTSGEK3	4666.57		
D3ZNV6	D3ZNV6	D3ZNV6_RAT	Elmod2	ELMO domain containing 2	1	IENSLTYSK	IENSLTYSK	2	IENSLTYSK2	18965.1	19536.5	19357.3
Q5XIE8	Q5XIE8	ITM2B_RAT	Itm2b	Integral membrane protein 2B	1	IENVDHLGFFIYR	IENVDHLGFFIYR	3	IENVDHLGFFIYR3	44775.3	42738.9	34615.8
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	IENVSYQDR	IENVSYQDR	2	IENVSYQDR2	43180	46218.2	43813.8
A0A0G2JVP5	A0A0G2JVP5	A0A0G2JVP5_RAT	Paip1	Poly(A) binding protein interacting protein 1	1	IENVVLDANCSR	IENVVLDANC(UniMod:4)SR	2	IENVVLDANC(UniMod:4)SR2	48763.8	50517.4	48178.9
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	IENVVLVVPAK	IENVVLVVPAK	2	IENVVLVVPAK2	57984.6	63170.8	53155.7
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	IENVYSR	IENVYSR	2	IENVYSR2	186471	202778	195127
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	IEPDDSQTWDEEER	IEPDDSQTWDEEER	2	IEPDDSQTWDEEER2	79453.6	94765.5	77073
Q9JLT6	Q9JLT6	BID_RAT	Bid	BH3-interacting domain death agonist	1	IEPDSESQDEVIHNIAR	IEPDSESQDEVIHNIAR	3	IEPDSESQDEVIHNIAR3	76825.3	101374	50555.5
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	IEPELDGSSAVTSHDSSTNGLIGFIK	IEPELDGSSAVTSHDSSTNGLIGFIK	3	IEPELDGSSAVTSHDSSTNGLIGFIK3	15791.2	16797.1	15389.3
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	IEPEWSIVSGNTPIAVWGTHLDLIQNPQIR	IEPEWSIVSGNTPIAVWGTHLDLIQNPQIR	4	IEPEWSIVSGNTPIAVWGTHLDLIQNPQIR4		3749.72	2155.19
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	IEPFEIVQSLQMLGLNISEK	IEPFEIVQSLQMLGLNISEK	3	IEPFEIVQSLQMLGLNISEK3		8521.26	19880.9
F7FPK8	F7FPK8	F7FPK8_RAT	Lman2	Lectin, mannose-binding 2	1	IEPGVNFLK	IEPGVNFLK	2	IEPGVNFLK2	649357	612662	659838
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	IEPIDVEEGDSIVLPCNPPK	IEPIDVEEGDSIVLPC(UniMod:4)NPPK	3	IEPIDVEEGDSIVLPC(UniMod:4)NPPK3	32434.3	22306.2	18726.9
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	IEPIPGESPK	IEPIPGESPK	2	IEPIPGESPK2	266623	285796	315283
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	IEPMLETLENLSSR	IEPMLETLENLSSR	2	IEPMLETLENLSSR2	72171.9	61841.4	59065.2
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	IEPMLETLENLSSR	IEPMLETLENLSSR	3	IEPMLETLENLSSR3	19046.1	18314.9	21006.4
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	IEPMVVPGVEFEPMLIPHHK	IEPMVVPGVEFEPMLIPHHK	3	IEPMVVPGVEFEPMLIPHHK3	5053.53	15449.9	10364.9
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	IEPMVVPGVEFEPMLIPHHK	IEPMVVPGVEFEPMLIPHHK	4	IEPMVVPGVEFEPMLIPHHK4	13059.8	11008.5	7022.14
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	IEPPDTGLYYDEYLK	IEPPDTGLYYDEYLK	2	IEPPDTGLYYDEYLK2	222474	242947	191467
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	IEPPDTGLYYDEYLK	IEPPDTGLYYDEYLK	3	IEPPDTGLYYDEYLK3		13383.5	5961.88
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	IEPQNTSPADVGISK	IEPQNTSPADVGISK	2	IEPQNTSPADVGISK2		11856.4	17497.1
Q66HG5	Q66HG5	TM9S2_RAT	Tm9sf2	Transmembrane 9 superfamily member 2	1	IEPSPYK	IEPSPYK	1	IEPSPYK1	14388.3		
Q66HG5	Q66HG5	TM9S2_RAT	Tm9sf2	Transmembrane 9 superfamily member 2	1	IEPSPYK	IEPSPYK	2	IEPSPYK2	459249	472067	475815
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	IEPSQAVYSFK	IEPSQAVYSFK	2	IEPSQAVYSFK2	20277	24700.1	17352
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	IEPSQAVYSFK	IEPSQAVYSFK	3	IEPSQAVYSFK3	16862.5	20103.8	20324.9
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	IEPSQAVYSFKDQVLISCDTGYK	IEPSQAVYSFKDQVLISC(UniMod:4)DTGYK	3	IEPSQAVYSFKDQVLISC(UniMod:4)DTGYK3	14517.2	5327.33	16155.2
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	IEPVFHVMGFSVTGR	IEPVFHVMGFSVTGR	3	IEPVFHVMGFSVTGR3	60013.6	51124.2	51408.9
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	IEPVSNTHPLLVFINPK	IEPVSNTHPLLVFINPK	2	IEPVSNTHPLLVFINPK2	4637.04	4213.89	
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	IEPVSNTHPLLVFINPK	IEPVSNTHPLLVFINPK	3	IEPVSNTHPLLVFINPK3	49515.9	44603.5	52876.4
D3ZAE6	D3ZAE6	D3ZAE6_RAT	Vasn	Vasorin	1	IEPVSPTSLR	IEPVSPTSLR	2	IEPVSPTSLR2	42315.8	36525.4	35218.4
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	IEPYMPYEFTCEGMLQR	IEPYMPYEFTC(UniMod:4)EGMLQR	3	IEPYMPYEFTC(UniMod:4)EGMLQR3		7396.04	10625.3
D3ZBE5	D3ZBE5	NEK7_RAT	Nek7	Serine/threonine-protein kinase Nek7	1	IEQCDYPPLPSDHYSEELR	IEQC(UniMod:4)DYPPLPSDHYSEELR	3	IEQC(UniMod:4)DYPPLPSDHYSEELR3	7362.39	4807.08	1428.34
Q5U1Z9	Q5U1Z9	Q5U1Z9_RAT	Mtx2	Metaxin 2	1	IEQDYFEDR	IEQDYFEDR	2	IEQDYFEDR2	4188.86	9007.02	6530.49
D3ZE26	D3ZE26	D3ZE26_RAT	Tmcc2	Transmembrane and coiled-coil domain family 2	1	IEQEARDDNVAEYLK	IEQEARDDNVAEYLK	3	IEQEARDDNVAEYLK3	13473.9	23961.9	13275.1
A0A8I5ZP83	D4A9Z8;A0A8I5ZP83	A0A8I5ZP83_RAT	Chmp4b	Charged multivesicular body protein 4B	0	IEQELTAAK	IEQELTAAK	2	IEQELTAAK2	171311	175607	173539
Q5U2N3	Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	1	IEQFIHDVGLR	IEQFIHDVGLR	3	IEQFIHDVGLR3	8140.54	8090	11936.7
Q6P799	Q6P799	SYSC_RAT	Sars1	Serine--tRNA ligase, cytoplasmic	1	IEQFVYSSPHDNK	IEQFVYSSPHDNK	2	IEQFVYSSPHDNK2	4054.49	2975.79	3822.39
Q6P799	Q6P799	SYSC_RAT	Sars1	Serine--tRNA ligase, cytoplasmic	1	IEQFVYSSPHDNK	IEQFVYSSPHDNK	3	IEQFVYSSPHDNK3	10257.8	16823.5	8374.68
Q4V8I7	Q4V8I7	LRC8A_RAT	Lrrc8a	Volume-regulated anion channel subunit LRRC8A	1	IEQGIVDR	IEQGIVDR	2	IEQGIVDR2	21976.9	26228.3	22318
Q05695	Q05695	L1CAM_RAT	L1cam	Neural cell adhesion molecule L1	1	IEQGSLILSNVQPSDTMVTQCEAR	IEQGSLILSNVQPSDTMVTQC(UniMod:4)EAR	3	IEQGSLILSNVQPSDTMVTQC(UniMod:4)EAR3	13522.1	11412.3	9440.29
O89049	O89049	TRXR1_RAT	Txnrd1	Thioredoxin reductase 1, cytoplasmic	1	IEQIEAGTPGR	IEQIEAGTPGR	2	IEQIEAGTPGR2	8535.48	7501.33	9639.83
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	IEQIIAQGEQLIEK	IEQIIAQGEQLIEK	2	IEQIIAQGEQLIEK2	3473.5	9026.29	
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	IEQLCSGAAYCQFMDMLFPGSIALK	IEQLC(UniMod:4)SGAAYC(UniMod:4)QFMDMLFPGSIALK	3	IEQLC(UniMod:4)SGAAYC(UniMod:4)QFMDMLFPGSIALK3	18651.3		
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	IEQLEQLLEENHEIISHIK	IEQLEQLLEENHEIISHIK	4	IEQLEQLLEENHEIISHIK4	24951.7	32681.2	27122.4
F7FQB8	F7FQB8	F7FQB8_RAT	Kpna4	Karyopherin subunit alpha 4	1	IEQLQNHENEDIYK	IEQLQNHENEDIYK	2	IEQLQNHENEDIYK2	8898.46	4335.24	3695.66
F7FQB8	F7FQB8	F7FQB8_RAT	Kpna4	Karyopherin subunit alpha 4	1	IEQLQNHENEDIYK	IEQLQNHENEDIYK	3	IEQLQNHENEDIYK3	285918	333048	284434
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	IEQLSPFPFDLLLK	IEQLSPFPFDLLLK	2	IEQLSPFPFDLLLK2	21496.9	46171.1	56800.3
Q9JHU5	Q9JHU5	ARFP1_RAT	Arfip1	Arfaptin-1	1	IEQSQHLFQIHK	IEQSQHLFQIHK	3	IEQSQHLFQIHK3	21845.1	17929.3	25014.9
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	IEQYATR	IEQYATR	2	IEQYATR2	190456	263661	256713
P29419	P29419	ATP5I_RAT	Atp5me	ATP synthase subunit e, mitochondrial	1	IERELAEAEDVSIFK	IERELAEAEDVSIFK	3	IERELAEAEDVSIFK3	3621.86	5926.05	5319.16
A0A8I6GAE6	A0A8I6GAE6	A0A8I6GAE6_RAT	Ddx19b	RNA helicase	1	IERLDTDDLDEIEK	IERLDTDDLDEIEK	3	IERLDTDDLDEIEK3	8936.42	2856.11	8355.18
F7EUD8	F1LQF7;F7EUD8	F7EUD8_RAT	Trpc6	Transient receptor ion channel domain-containing protein	0	IERPHDYFCK	IERPHDYFC(UniMod:4)K	2	IERPHDYFC(UniMod:4)K2	3700.5	2788	3337.94
F7EUD8	F1LQF7;F7EUD8	F7EUD8_RAT	Trpc6	Transient receptor ion channel domain-containing protein	0	IERPHDYFCK	IERPHDYFC(UniMod:4)K	3	IERPHDYFC(UniMod:4)K3	69043.5	77828.4	46185.8
Q5U2Z4	Q5U2Z4	Q5U2Z4_RAT	Nfkb2	Nuclear factor kappa B subunit 2	1	IERPVTVFLQLK	IERPVTVFLQLK	3	IERPVTVFLQLK3	3483.12	9589.52	6178.11
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	IESDAQEPAEPEDDLDIMLGNKK	IESDAQEPAEPEDDLDIMLGNKK	3	IESDAQEPAEPEDDLDIMLGNKK3	45633.4	51286.2	46030
Q6AYD0	Q6AYD0	Q6AYD0_RAT	Lrrc17	Leucine rich repeat containing 17	1	IESEAFFGLNK	IESEAFFGLNK	2	IESEAFFGLNK2		3398.95	4376.07
Q66H74	Q66H74	GLP3L_RAT	Golph3l	Golgi phosphoprotein 3-like	1	IESEEDTNQER	IESEEDTNQER	2	IESEEDTNQER2	1070.82		6114.21
Q66H54	Q66H54	FHI1B_RAT	Fhip1b	FHF complex subunit HOOK-interacting protein 1B	1	IESFAASQEDFPALLSK	IESFAASQEDFPALLSK	2	IESFAASQEDFPALLSK2	4202.59	1071.96	
P29117	P29117	PPIF_RAT	Ppif	Peptidyl-prolyl cis-trans isomerase F, mitochondrial	1	IESFGSK	IESFGSK	1	IESFGSK1	16724.5	8747.89	12045.1
P29117	P29117	PPIF_RAT	Ppif	Peptidyl-prolyl cis-trans isomerase F, mitochondrial	1	IESFGSK	IESFGSK	2	IESFGSK2	1.03211e+06	1.1558e+06	1.22442e+06
Q62818	Q62818	EI2BB_RAT	Eif2b2	Translation initiation factor eIF-2B subunit beta	1	IESFVETLK	IESFVETLK	2	IESFVETLK2	12959.3	20076.5	20979.8
Q62818	Q62818	EI2BB_RAT	Eif2b2	Translation initiation factor eIF-2B subunit beta	1	IESFVETLKR	IESFVETLKR	3	IESFVETLKR3	10380.7	9091.33	10042.2
P05714	P05714	RAB4A_RAT	Rab4a	Ras-related protein Rab-4A	1	IESGELDPER	IESGELDPER	2	IESGELDPER2	11766.3	11893.1	12365.2
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	IESGGGNILIHHSR	IESGGGNILIHHSR	3	IESGGGNILIHHSR3	23800.5	22813.1	14874.2
Q3B7D0	Q3B7D0	HEM6_RAT	Cpox	Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial	1	IESILMSLPLTAR	IESILMSLPLTAR	2	IESILMSLPLTAR2	15208	7013.72	10357.3
Q3B7D0	Q3B7D0	HEM6_RAT	Cpox	Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial	1	IESILMSLPLTAR	IESILMSLPLTAR	3	IESILMSLPLTAR3	4542.43		1402.65
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	IESLEQEK	IESLEQEK	2	IESLEQEK2	327348	318627	313424
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	IESPEAK	IESPEAK	1	IESPEAK1	197687	184761	
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	IESPEAK	IESPEAK	2	IESPEAK2	1.26702e+07	1.61233e+07	
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	IESPEAKNSHEFYAINGMIYNLPGLR	IESPEAKNSHEFYAINGMIYNLPGLR	4	IESPEAKNSHEFYAINGMIYNLPGLR4	10547.1	6708.95	6679.63
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	IESQEQVAK	IESQEQVAK	2	IESQEQVAK2	17181.7	17285	21396.5
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	IESSSSHVAEGQTLDLNCVVPGQAQVTWR	IESSSSHVAEGQTLDLNC(UniMod:4)VVPGQAQVTWR	4	IESSSSHVAEGQTLDLNC(UniMod:4)VVPGQAQVTWR4	11708.7	18626.4	16363.9
D3ZHK4	D3ZHK4	D3ZHK4_RAT	Rb1cc1	RB1-inducible coiled-coil 1	1	IESTTGITTTTSPK	IESTTGITTTTSPK	2	IESTTGITTTTSPK2	3300.69	4115.91	
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	IESVHFSDQFSGPK	IESVHFSDQFSGPK	2	IESVHFSDQFSGPK2	2642.09		
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	IESVHFSDQFSGPK	IESVHFSDQFSGPK	3	IESVHFSDQFSGPK3	77821.2	98304	79315.3
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	IESWLETHVVLER	IESWLETHVVLER	2	IESWLETHVVLER2	11966.1	5364.3	8728.15
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	IESWLETHVVLER	IESWLETHVVLER	3	IESWLETHVVLER3	162665	138769	127731
A0A8I5ZM80	A0A8I5ZM80	A0A8I5ZM80_RAT	Armh3	Armadillo-like helical domain containing 3	1	IESYAAVNHISQLSEEQVLEVVR	IESYAAVNHISQLSEEQVLEVVR	3	IESYAAVNHISQLSEEQVLEVVR3	3310.75	4790.5	2760.09
D3ZF97	D3ZF97	D3ZF97_RAT	Erlec1	Endoplasmic reticulum lectin	1	IESYWTYEVCHGK	IESYWTYEVC(UniMod:4)HGK	3	IESYWTYEVC(UniMod:4)HGK3	1830.53	4012.09	3066.22
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	IETAAMDGTLR	IETAAMDGTLR	2	IETAAMDGTLR2	87689.5	89331	96202.5
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	IETAQQFFSWFAK	IETAQQFFSWFAK	2	IETAQQFFSWFAK2	4560.46	5783.74	2247.11
A0A8I5ZYN9	A0A8I5ZYN9	A0A8I5ZYN9_RAT	Ipo11-ps1	Similar to importin 11	1	IETATTLK	IETATTLK	2	IETATTLK2	10823.1	23373.1	14795.2
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	IETDSNK	IETDSNK	1	IETDSNK1			6247.81
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	IETDSNK	IETDSNK	2	IETDSNK2			17908.4
P63102	P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	1	IETELRDICNDVLSLLEK	IETELRDIC(UniMod:4)NDVLSLLEK	3	IETELRDIC(UniMod:4)NDVLSLLEK3	68755.6	109293	131147
D3ZEJ2	D3ZEJ2	D3ZEJ2_RAT	Mcur1	Mitochondrial calcium uniporter regulator 1	1	IETEVAGLK	IETEVAGLK	2	IETEVAGLK2	16806.4	10634.7	14692.4
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	IETEVCR	IETEVC(UniMod:4)R	2	IETEVC(UniMod:4)R2	23445.8	23735.4	20251.9
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	IETHLFAFEIYFR	IETHLFAFEIYFR	3	IETHLFAFEIYFR3	4508.21	1704.02	6850.15
Q6URK4	D4A6A2;F1M6C7;Q6URK4	ROA3_RAT	Hnrnpa3	Heterogeneous nuclear ribonucleoprotein A3	0	IETIEVMEDR	IETIEVMEDR	2	IETIEVMEDR2	33333.6	31832.3	31374.7
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	IETLDPALIR	IETLDPALIR	2	IETLDPALIR2	11970	9514.08	9130.01
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	IETLDPALIRPGR	IETLDPALIRPGR	3	IETLDPALIRPGR3	379854	331682	445871
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	IETMLGDVAVAVHPK	IETMLGDVAVAVHPK	2	IETMLGDVAVAVHPK2	10075.7	6150.93	6894.34
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	IETMLGDVAVAVHPK	IETMLGDVAVAVHPK	3	IETMLGDVAVAVHPK3	70485.7	64200.5	80835.9
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	IETQDIQALR	IETQDIQALR	2	IETQDIQALR2	43688.1	40848.7	32361.9
Q9R1Z0	Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	1	IETSINLAWTAGSNNTR	IETSINLAWTAGSNNTR	2	IETSINLAWTAGSNNTR2	83923.9	98763.7	97152.1
Q9R1Z0	Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	1	IETSINLAWTAGSNNTR	IETSINLAWTAGSNNTR	3	IETSINLAWTAGSNNTR3	16336.1	9204.18	
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	IETSSLDGENR	IETSSLDGENR	2	IETSSLDGENR2	11188.9	9621.31	12928.3
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	IETSSLDGENRR	IETSSLDGENRR	3	IETSSLDGENRR3	140453	134412	132012
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	IETSSPTVTEGQTLDLNCVVVGR	IETSSPTVTEGQTLDLNC(UniMod:4)VVVGR	3	IETSSPTVTEGQTLDLNC(UniMod:4)VVVGR3	2776.66	3241.5	2937.07
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	IETVKYPTYPEAEK	IETVKYPTYPEAEK	3	IETVKYPTYPEAEK3	9272.1	5131.61	7813.84
P53812	P53812	PIPNB_RAT	Pitpnb	Phosphatidylinositol transfer protein beta isoform	1	IETWHKPDLGTLENVHGLDPNTWK	IETWHKPDLGTLENVHGLDPNTWK	4	IETWHKPDLGTLENVHGLDPNTWK4	5724.27	2432.38	4502.67
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	IEVASSVK	IEVASSVK	1	IEVASSVK1	2442.61		1918.5
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	IEVASSVK	IEVASSVK	2	IEVASSVK2	737814	724080	787607
P24368	P24368	PPIB_RAT	Ppib	Peptidyl-prolyl cis-trans isomerase B	1	IEVEKPFAIAK	IEVEKPFAIAK	2	IEVEKPFAIAK2	19922.1	16865.8	15434.9
P24368	P24368	PPIB_RAT	Ppib	Peptidyl-prolyl cis-trans isomerase B	1	IEVEKPFAIAK	IEVEKPFAIAK	3	IEVEKPFAIAK3	230400	155837	149573
P24368	P24368	PPIB_RAT	Ppib	Peptidyl-prolyl cis-trans isomerase B	1	IEVEKPFAIAKE	IEVEKPFAIAKE	2	IEVEKPFAIAKE2	18752.1	13554.9	7157.48
P24368	P24368	PPIB_RAT	Ppib	Peptidyl-prolyl cis-trans isomerase B	1	IEVEKPFAIAKE	IEVEKPFAIAKE	3	IEVEKPFAIAKE3	310668	304464	319831
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	IEVEQALAHPYLEQYYDPSDEPIAEAPFK	IEVEQALAHPYLEQYYDPSDEPIAEAPFK	4	IEVEQALAHPYLEQYYDPSDEPIAEAPFK4		5580.72	
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	IEVGLVVGNSQVAFEK	IEVGLVVGNSQVAFEK	2	IEVGLVVGNSQVAFEK2	25055.3	18613	27645.3
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	IEVLEEELR	IEVLEEELR	2	IEVLEEELR2	71866.4	48810.4	78158
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	IEVLNEK	IEVLNEK	2	IEVLNEK2	59230.7	50703.5	60950.7
A0A8I5ZWC6	A0A8I5ZWC6	A0A8I5ZWC6_RAT	Kpna3	Importin subunit alpha	1	IEVLQQHENEDIYK	IEVLQQHENEDIYK	2	IEVLQQHENEDIYK2	4176.71	2333.61	3411.66
A0A8I5ZWC6	A0A8I5ZWC6	A0A8I5ZWC6_RAT	Kpna3	Importin subunit alpha	1	IEVLQQHENEDIYK	IEVLQQHENEDIYK	3	IEVLQQHENEDIYK3	113217	126557	125824
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	IEVLYEDEGFR	IEVLYEDEGFR	2	IEVLYEDEGFR2	163871	142672	153707
A0A0G2JZU6	A0A0G2JZU6	A0A0G2JZU6_RAT	Tmeff2	Transmembrane protein with EGF-like and two follistatin-like domains 2	1	IEVMSLGR	IEVMSLGR	2	IEVMSLGR2	34367.3	28404.8	36160.8
Q68FX1	Q68FX1	MPI_RAT	Mpi	Mannose-6-phosphate isomerase	1	IEVPGSVTEYK	IEVPGSVTEYK	2	IEVPGSVTEYK2	25518.9	28693.1	24657.2
D3ZXT7	D3ZXT7	D3ZXT7_RAT	Timd4	T-cell immunoglobulin and mucin domain containing 4	1	IEVPGWFNDVK	IEVPGWFNDVK	2	IEVPGWFNDVK2	67886.8	67456.4	86292.5
D3ZXT7	D3ZXT7	D3ZXT7_RAT	Timd4	T-cell immunoglobulin and mucin domain containing 4	1	IEVPGWFNDVKK	IEVPGWFNDVKK	2	IEVPGWFNDVKK2	16908.7	25475.2	20653.8
D3ZXT7	D3ZXT7	D3ZXT7_RAT	Timd4	T-cell immunoglobulin and mucin domain containing 4	1	IEVPGWFNDVKK	IEVPGWFNDVKK	3	IEVPGWFNDVKK3	65757.7	61741	94613
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	IEVPLHLLMEQTHLK	IEVPLHLLMEQTHLK	3	IEVPLHLLMEQTHLK3	16992.2	16733.5	24787.3
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	IEVPLHLLMEQTHLK	IEVPLHLLMEQTHLK	4	IEVPLHLLMEQTHLK4	46903.8	56741.6	33791.4
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	IEVSEDGTK	IEVSEDGTK	1	IEVSEDGTK1	1412.12	1688.9	1489.6
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	IEVSEDGTK	IEVSEDGTK	2	IEVSEDGTK2	481768	429063	458833
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	IEVSMSSVK	IEVSMSSVK	2	IEVSMSSVK2	213909	223265	237408
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	IEVTTEK	IEVTTEK	1	IEVTTEK1	5294.1	4065.14	2474.14
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	IEVTTEK	IEVTTEK	2	IEVTTEK2	673668	618464	638700
P08649	P08649	CO4_RAT	C4	Complement C4	1	IEVTVTGYVEYTR	IEVTVTGYVEYTR	2	IEVTVTGYVEYTR2	60556.8	50685.7	66409.1
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	IEVVAGEHNIDEK	IEVVAGEHNIDEK	2	IEVVAGEHNIDEK2	936931	969521	1.00494e+06
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	IEVVAGEHNIDEK	IEVVAGEHNIDEK	3	IEVVAGEHNIDEK3	2854.46	5.73421e+06	5.91333e+06
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	IEVVAGEHNIDEKEDTEQR	IEVVAGEHNIDEKEDTEQR	3	IEVVAGEHNIDEKEDTEQR3	3.82489e+06	3.86249e+06	3.69349e+06
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	IEVVAGEHNIDEKEDTEQR	IEVVAGEHNIDEKEDTEQR	4	IEVVAGEHNIDEKEDTEQR4	8.20407e+06	8.26638e+06	8.52032e+06
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	IEVVAGEHNIDEKEDTEQRR	IEVVAGEHNIDEKEDTEQRR	3	IEVVAGEHNIDEKEDTEQRR3	3.38743e+06	3.30504e+06	3.08242e+06
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	IEVVAGEHNIDEKEDTEQRR	IEVVAGEHNIDEKEDTEQRR	4	IEVVAGEHNIDEKEDTEQRR4	6.96537e+06	5.92355e+06	6.65308e+06
A0A8I6A5J1	A0A8I6A5J1	A0A8I6A5J1_RAT	Nars2	asparagine--tRNA ligase	1	IEVVGTCEAK	IEVVGTC(UniMod:4)EAK	2	IEVVGTC(UniMod:4)EAK2	4983.91	6548.69	7338.67
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	IEVVMAEPLEK	IEVVMAEPLEK	2	IEVVMAEPLEK2	45783.7	55920.1	54760.5
B5DEH2	B5DEH2	ERLN2_RAT	Erlin2	Erlin-2	1	IEVVNFLVPHAVYDIVK	IEVVNFLVPHAVYDIVK	3	IEVVNFLVPHAVYDIVK3	15257.8	15714	11140.7
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	IEWHLNAFNTK	IEWHLNAFNTK	3	IEWHLNAFNTK3	43023	53586.4	51198.2
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	IEWLESHQDADIEDFK	IEWLESHQDADIEDFK	3	IEWLESHQDADIEDFK3	1.96867e+06	1.91036e+06	1.85989e+06
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	IEWLESHQDADIEDFKAK	IEWLESHQDADIEDFKAK	3	IEWLESHQDADIEDFKAK3	36976.1	37873.9	29882.3
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	IEWLESHQDADIEDFKAK	IEWLESHQDADIEDFKAK	4	IEWLESHQDADIEDFKAK4	98202.3	93415.5	93637.2
Q9JHU5	Q9JHU5	ARFP1_RAT	Arfip1	Arfaptin-1	1	IEYDAYR	IEYDAYR	2	IEYDAYR2	59420.4	54097.7	
F1LVV4	F1LVV4	F1LVV4_RAT	Rcc2	Regulator of chromosome condensation 2	1	IEYDCELVPR	IEYDC(UniMod:4)ELVPR	2	IEYDC(UniMod:4)ELVPR2	4390.76		4108.71
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	IEYDDQNDGSCDVK	IEYDDQNDGSC(UniMod:4)DVK	2	IEYDDQNDGSC(UniMod:4)DVK2	1616.36	874.029	
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	IEYDTFGELK	IEYDTFGELK	2	IEYDTFGELK2	97658.9	77810	96257.2
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	IEYDTFGELKVPTDK	IEYDTFGELKVPTDK	2	IEYDTFGELKVPTDK2	4935.62	3472.07	5613.52
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	IEYDTFGELKVPTDK	IEYDTFGELKVPTDK	3	IEYDTFGELKVPTDK3	132304	126953	151697
B5DEL8	B5DEL8	B5DEL8_RAT	Ndufs5	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5	1	IEYEDFEECFLR	IEYEDFEEC(UniMod:4)FLR	2	IEYEDFEEC(UniMod:4)FLR2	13196.5	19634.7	13862.3
O55171	O55171;O88267	ACOT2_RAT	Acot2	Acyl-coenzyme A thioesterase 2, mitochondrial	0	IEYFEEAVNYLR	IEYFEEAVNYLR	2	IEYFEEAVNYLR2	13046.5	18493.7	18892.9
O55171	O55171;O88267	ACOT2_RAT	Acot2	Acyl-coenzyme A thioesterase 2, mitochondrial	0	IEYFEEAVNYLR	IEYFEEAVNYLR	3	IEYFEEAVNYLR3		5701.77	4024.4
D3ZUP5	D3ZUP5	D3ZUP5_RAT	Brk1	BRICK1 subunit of SCAR/WAVE actin nucleating complex	1	IEYIEAR	IEYIEAR	2	IEYIEAR2	82201.1	66041.6	51735.9
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	IEYQFFEDK	IEYQFFEDK	2	IEYQFFEDK2	221122	209765	236734
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	IEYVEVFHAGQSFR	IEYVEVFHAGQSFR	2	IEYVEVFHAGQSFR2	4982.19	1790.81	3509.19
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	IEYVEVFHAGQSFR	IEYVEVFHAGQSFR	3	IEYVEVFHAGQSFR3	86612.4	96350.8	95222.9
P02764	P02764	A1AG_RAT	Orm1	Alpha-1-acid glycoprotein	1	IFAHLIVLK	IFAHLIVLK	2	IFAHLIVLK2	25043.7	6672.76	7757.15
P02764	P02764	A1AG_RAT	Orm1	Alpha-1-acid glycoprotein	1	IFAHLIVLKK	IFAHLIVLKK	3	IFAHLIVLKK3	7017.24	1879.63	
A0A8I6ANU2	A0A8I6ANU2	A0A8I6ANU2_RAT	Ptcd3	Pentatricopeptide repeat domain 3	1	IFALMPEK	IFALMPEK	2	IFALMPEK2	8396.79	10514.7	7284.82
D3ZZA8	D3ZZA8	D3ZZA8_RAT	Sec24a	SEC24 homolog A, COPII coat complex component	1	IFAMCQVK	IFAMC(UniMod:4)QVK	2	IFAMC(UniMod:4)QVK2	8945.99	9581.48	7794.65
P47858	P47858	PFKAM_RAT	Pfkm	ATP-dependent 6-phosphofructokinase, muscle type	1	IFANTPDSGCVLGMR	IFANTPDSGC(UniMod:4)VLGMR	2	IFANTPDSGC(UniMod:4)VLGMR2	34615.8	40336.6	38515.8
P62718	P62718;F1M0K6	RL18A_RAT	Rpl18a	Large ribosomal subunit protein eL20	0	IFAPNHVVAK	IFAPNHVVAK	2	IFAPNHVVAK2	3477.79	1898.07	
Q05754	Q05754	DOPO_RAT	Dbh	Dopamine beta-hydroxylase	1	IFASQLHTHLTGR	IFASQLHTHLTGR	3	IFASQLHTHLTGR3	14870.9	7418.25	11440.6
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	IFATSTEPVLQQELQLK	IFATSTEPVLQQELQLK	2	IFATSTEPVLQQELQLK2	14827.7	6038.59	3854.44
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	IFATSTEPVLQQELQLK	IFATSTEPVLQQELQLK	3	IFATSTEPVLQQELQLK3	5119.69	4838.54	6626.52
B2GV53	B2GV53	B2GV53_RAT	Slc25a32	Solute carrier family 25 member 32	1	IFAVAATYPYQVVR	IFAVAATYPYQVVR	2	IFAVAATYPYQVVR2	7097.76	8111.38	894.901
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	IFAVDCGLK	IFAVDC(UniMod:4)GLK	2	IFAVDC(UniMod:4)GLK2	82679.6	69525.2	47795.1
Q9R1R4	Q9R1R4	TDRD7_RAT	Tdrd7	Tudor domain-containing protein 7	1	IFAVEILDK	IFAVEILDK	2	IFAVEILDK2	4237.58	4520.65	4854.44
P62138	P62138;P63088;P62142	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	0	IFCCHGGLSPDLQSMEQIR	IFC(UniMod:4)C(UniMod:4)HGGLSPDLQSMEQIR	3	IFC(UniMod:4)C(UniMod:4)HGGLSPDLQSMEQIR3	335491	289219	300453
P62138	P62138;P63088;P62142	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	0	IFCCHGGLSPDLQSMEQIRR	IFC(UniMod:4)C(UniMod:4)HGGLSPDLQSMEQIRR	3	IFC(UniMod:4)C(UniMod:4)HGGLSPDLQSMEQIRR3	12909.9	12133.3	8881.67
P62138	P62138;P63088;P62142	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	0	IFCCHGGLSPDLQSMEQIRR	IFC(UniMod:4)C(UniMod:4)HGGLSPDLQSMEQIRR	4	IFC(UniMod:4)C(UniMod:4)HGGLSPDLQSMEQIRR4	78079	91593.3	99557.9
Q63486	Q63486;Q63487	RRAGA_RAT	Rraga	Ras-related GTP-binding protein A	0	IFCLVHK	IFC(UniMod:4)LVHK	2	IFC(UniMod:4)LVHK2	18553.3	16939.5	12801.4
Q5BJ92	Q5BJ92	PP4C_RAT	Ppp4c	Serine/threonine-protein phosphatase 4 catalytic subunit	1	IFCVHGGLSPSIQTLDQIR	IFC(UniMod:4)VHGGLSPSIQTLDQIR	3	IFC(UniMod:4)VHGGLSPSIQTLDQIR3	277431	219451	185244
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	IFCYYCCNNYVVTKPSGK	IFC(UniMod:4)YYC(UniMod:4)C(UniMod:4)NNYVVTKPSGK	3	IFC(UniMod:4)YYC(UniMod:4)C(UniMod:4)NNYVVTKPSGK3	33598.8	25918.6	40501.1
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	IFDDAYK	IFDDAYK	2	IFDDAYK2	39608.7	41899.7	38530.2
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	IFDDFGTHYFTSGSLGGK	IFDDFGTHYFTSGSLGGK	2	IFDDFGTHYFTSGSLGGK2	6532.19	1790.21	1854.51
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	IFDDFGTHYFTSGSLGGK	IFDDFGTHYFTSGSLGGK	3	IFDDFGTHYFTSGSLGGK3	71181.3	70961.2	59570.9
Q62848	Q62848	ARFG1_RAT	Arfgap1	ADP-ribosylation factor GTPase-activating protein 1	1	IFDDVSSGVSQLASK	IFDDVSSGVSQLASK	2	IFDDVSSGVSQLASK2	95340.4	99211.5	99176.7
Q62848	Q62848	ARFG1_RAT	Arfgap1	ADP-ribosylation factor GTPase-activating protein 1	1	IFDDVSSGVSQLASK	IFDDVSSGVSQLASK	3	IFDDVSSGVSQLASK3	10384.9	9828.88	5244.49
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	IFDENELELLMCGLGDVDVNDWREHTK	IFDENELELLMC(UniMod:4)GLGDVDVNDWREHTK	4	IFDENELELLMC(UniMod:4)GLGDVDVNDWREHTK4	27803.5	30638.4	23977.5
Q9R010	Q9R010	CIB1_RAT	Cib1	Calcium and integrin-binding protein 1	1	IFDFDDDGTLDREDLSR	IFDFDDDGTLDREDLSR	3	IFDFDDDGTLDREDLSR3	87414	75182.3	72927.4
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	IFDGLSNMGSQAGK	IFDGLSNMGSQAGK	2	IFDGLSNMGSQAGK2	99526.4	113625	102919
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	IFDIDEAEEAIK	IFDIDEAEEAIK	2	IFDIDEAEEAIK2	40628	43771.8	30085.6
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	IFDIDEAEEAIKDVK	IFDIDEAEEAIKDVK	2	IFDIDEAEEAIKDVK2		1749.13	
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	IFDIDEAEEAIKDVK	IFDIDEAEEAIKDVK	3	IFDIDEAEEAIKDVK3	268721	319542	263513
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	IFDITSK	IFDITSK	2	IFDITSK2	20452.3	25764.5	15902
Q99P63	Q99P63	MICU2_RAT	Micu2	Calcium uptake protein 2, mitochondrial	1	IFDLDGDECLSHGEFLGVLK	IFDLDGDEC(UniMod:4)LSHGEFLGVLK	3	IFDLDGDEC(UniMod:4)LSHGEFLGVLK3	49703.7	37245.7	17904
F1LU27	F1LU27	F1LU27_RAT	Focad	Focadhesin	1	IFDLLPNR	IFDLLPNR	2	IFDLLPNR2	8463.13	11353.2	10567.5
F1M471	F1M471	F1M471_RAT	Epm2aip1	EPM2A interacting protein 1	1	IFDPDRYQMVISR	IFDPDRYQMVISR	3	IFDPDRYQMVISR3	20838.6	26006.1	20049.3
D4ACK1	D4ACK1	D4ACK1_RAT	Nup214	Nucleoporin 214	1	IFDSPEELPK	IFDSPEELPK	2	IFDSPEELPK2	4086.06	6085.64	
D3ZNV6	D3ZNV6	D3ZNV6_RAT	Elmod2	ELMO domain containing 2	1	IFDTYGGAQR	IFDTYGGAQR	2	IFDTYGGAQR2	11480.3	7854.53	15296.2
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	IFECQGLPIVNGQCDPYATVTLAGPFR	IFEC(UniMod:4)QGLPIVNGQC(UniMod:4)DPYATVTLAGPFR	4	IFEC(UniMod:4)QGLPIVNGQC(UniMod:4)DPYATVTLAGPFR4	3126.37	5494.76	5718.62
D3ZDZ1	D3ZDZ1	D3ZDZ1_RAT	Apbb1ip	Amyloid beta precursor protein binding family B member 1 interacting protein	1	IFEDHENVVEVLSDWTR	IFEDHENVVEVLSDWTR	3	IFEDHENVVEVLSDWTR3	9581.14	10433.9	15464.9
P47816	P47816	PDCD2_RAT	Pdcd2	Programmed cell death protein 2	1	IFEFQVMPQLLNHLK	IFEFQVMPQLLNHLK	3	IFEFQVMPQLLNHLK3	7364.16	8898.32	9206.03
P0C5E3	P0C5E3	PALLD_RAT	Palld	Palladin (Fragment)	1	IFEGMPVTFTCR	IFEGMPVTFTC(UniMod:4)R	2	IFEGMPVTFTC(UniMod:4)R2	21623	5904.34	15652
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	IFEGNSNTK	IFEGNSNTK	2	IFEGNSNTK2	1.34465e+07	1.68437e+07	1.56693e+07
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	IFEGTNDILR	IFEGTNDILR	2	IFEGTNDILR2	16149.7	29579.4	34525.8
Q52KK4	Q52KK4	NAF1_RAT	Naf1	H/ACA ribonucleoprotein complex non-core subunit NAF1	1	IFEIFGPVAHPFYVLR	IFEIFGPVAHPFYVLR	3	IFEIFGPVAHPFYVLR3	3445.73	4118.3	
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	IFEINEER	IFEINEER	2	IFEINEER2	18270.1	16785.9	24483.3
P08650	P08650	CO5_RAT	C5	Complement C5	1	IFELFQVGFLNPATFTVYEYHRPDK	IFELFQVGFLNPATFTVYEYHRPDK	4	IFELFQVGFLNPATFTVYEYHRPDK4	11046.9	9759.62	3032.85
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	IFEQVLSELEPLCLAEQDFISK	IFEQVLSELEPLC(UniMod:4)LAEQDFISK	3	IFEQVLSELEPLC(UniMod:4)LAEQDFISK3	914.362		319.25
Q63190	Q63190	EMD_RAT	Emd	Emerin	1	IFEYETQR	IFEYETQR	2	IFEYETQR2	38538.9	60702.6	26993.7
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	IFEYLDR	IFEYLDR	2	IFEYLDR2	107178	110467	117671
D3ZYI0	D3ZYI0	D3ZYI0_RAT	Gca	Grancalcin	1	IFFDDYVACCVK	IFFDDYVAC(UniMod:4)C(UniMod:4)VK	2	IFFDDYVAC(UniMod:4)C(UniMod:4)VK2	35252.9	38702.3	34476.4
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	IFFHHLDNLRPSLTPVK	IFFHHLDNLRPSLTPVK	4	IFFHHLDNLRPSLTPVK4	5354.89	7344.25	
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	IFFSDIHFGNIQQINDDGSGR	IFFSDIHFGNIQQINDDGSGR	3	IFFSDIHFGNIQQINDDGSGR3	99452.2	126585	89883.3
Q8R500	Q8R500;Q8R4Z9	MFN2_RAT	Mfn2	Mitofusin-2	0	IFFVSAK	IFFVSAK	2	IFFVSAK2	53647.9	60314.9	57302.3
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	IFFYDSENPPGSEVLR	IFFYDSENPPGSEVLR	2	IFFYDSENPPGSEVLR2	76442.8	80927.8	109372
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	IFFYDSENPPGSEVLR	IFFYDSENPPGSEVLR	3	IFFYDSENPPGSEVLR3	1.04412e+07	1.11214e+07	1.25596e+07
O88959	O88959	INHBE_RAT	Inhbe	Inhibin beta E chain	1	IFGCGTTR	IFGC(UniMod:4)GTTR	2	IFGC(UniMod:4)GTTR2	37368.4	41843.6	52340.7
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	IFGGEIK	IFGGEIK	1	IFGGEIK1	32679.6	28562.1	31251.5
Q2KJ09	Q2KJ09	UBP16_RAT	Usp16	Ubiquitin carboxyl-terminal hydrolase 16	1	IFGGELTSTIMCDDCR	IFGGELTSTIMC(UniMod:4)DDC(UniMod:4)R	2	IFGGELTSTIMC(UniMod:4)DDC(UniMod:4)R2	2221.21	3935.79	4383.07
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	IFGGFLMR	IFGGFLMR	2	IFGGFLMR2	59474.5	61716.3	62068.7
Q9EST6	Q9EST6	AN32B_RAT	Anp32b	Acidic leucine-rich nuclear phosphoprotein 32 family member B	1	IFGGLDR	IFGGLDR	2	IFGGLDR2	66883.8	60093.7	76574.9
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	IFGGLIR	IFGGLIR	2	IFGGLIR2	147795	148225	145785
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	IFGGYSTK	IFGGYSTK	1	IFGGYSTK1	133365	158231	161805
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	IFGGYSTK	IFGGYSTK	2	IFGGYSTK2	2.45651e+07	2.9137e+07	2.91173e+07
D4AD75	D4AD75	D4AD75_RAT	Dpy19l1	Dpy-19 like C-mannosyltransferase 1	1	IFGIADDAHIGNLLTSK	IFGIADDAHIGNLLTSK	3	IFGIADDAHIGNLLTSK3	6653.95	6891.97	19524.7
Q6QI25	Q6QI25	ORML3_RAT	Ormdl3	ORM1-like protein 3	1	IFGINKY	IFGINKY	2	IFGINKY2	49113	43867.7	34088.9
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	IFGPIWNR	IFGPIWNR	2	IFGPIWNR2	142138	114800	139380
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	IFGQANTSVK	IFGQANTSVK	2	IFGQANTSVK2	51324.9	51699.4	62594.3
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	IFGSEAAWK	IFGSEAAWK	2	IFGSEAAWK2	47723.4	47796	43782.1
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	IFGSVHPVRPMK	IFGSVHPVRPMK	2	IFGSVHPVRPMK2	4546.29	2460.83	
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	IFGSVHPVRPMK	IFGSVHPVRPMK	3	IFGSVHPVRPMK3	352573	296973	302284
O35532	O35532	MSMO1_RAT	Msmo1	Methylsterol monooxygenase 1	1	IFGTDVQYHAYTEK	IFGTDVQYHAYTEK	3	IFGTDVQYHAYTEK3		2973.03	4716.09
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	IFGVAIYTGMETK	IFGVAIYTGMETK	2	IFGVAIYTGMETK2	36897.5	21272.4	29421.1
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	IFGVTTLDIVR	IFGVTTLDIVR	2	IFGVTTLDIVR2	1.1454e+06	1.11083e+06	1.23284e+06
Q09326	Q09326	MGAT2_RAT	Mgat2	Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	1	IFHAGDCGMHHK	IFHAGDC(UniMod:4)GMHHK	2	IFHAGDC(UniMod:4)GMHHK2	2383.13		3913.72
Q09326	Q09326	MGAT2_RAT	Mgat2	Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	1	IFHAGDCGMHHK	IFHAGDC(UniMod:4)GMHHK	3	IFHAGDC(UniMod:4)GMHHK3	3779.82	9740.59	9454.56
D3ZFJ6	D3ZFJ6	D3ZFJ6_RAT	Lactb	Lactamase, beta	1	IFHDLDMLTTVQEENEPVIYNR	IFHDLDMLTTVQEENEPVIYNR	3	IFHDLDMLTTVQEENEPVIYNR3	8328.79	7201.03	10546.1
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	IFHELTQTDK	IFHELTQTDK	2	IFHELTQTDK2	18985.1	17856	9008.47
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	IFHELTQTDK	IFHELTQTDK	3	IFHELTQTDK3	37955.7	32714	38815.4
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	IFHESTQTDK	IFHESTQTDK	2	IFHESTQTDK2		3227.79	
F1M7P8	F1M7P8	F1M7P8_RAT	Spryd3	SPRY domain containing 3	1	IFHGSGVGDPFGPR	IFHGSGVGDPFGPR	2	IFHGSGVGDPFGPR2	2170.78		
F1M7P8	F1M7P8	F1M7P8_RAT	Spryd3	SPRY domain containing 3	1	IFHGSGVGDPFGPR	IFHGSGVGDPFGPR	3	IFHGSGVGDPFGPR3	36205.9	35856.9	41079.6
Q5XHY7	B5DF55;Q5XHY7	STAM2_RAT	Stam2	Signal transducing adapter molecule 2	0	IFHLEVCSR	IFHLEVC(UniMod:4)SR	2	IFHLEVC(UniMod:4)SR2	8438.11		5587.17
Q5XHY7	B5DF55;Q5XHY7	STAM2_RAT	Stam2	Signal transducing adapter molecule 2	0	IFHLEVCSR	IFHLEVC(UniMod:4)SR	3	IFHLEVC(UniMod:4)SR3	36572.9	31322.4	30920.1
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	IFHTVTTTDDPVIR	IFHTVTTTDDPVIR	2	IFHTVTTTDDPVIR2	15424.4	13579.2	7822.45
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	IFHTVTTTDDPVIR	IFHTVTTTDDPVIR	3	IFHTVTTTDDPVIR3	269307	219237	228608
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	IFHTVTTTDDPVIRK	IFHTVTTTDDPVIRK	3	IFHTVTTTDDPVIRK3	9095.72	5808.69	3181.95
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	IFHTVTTTDDPVIRK	IFHTVTTTDDPVIRK	4	IFHTVTTTDDPVIRK4	17624.1	19920.8	13423.8
A0A8I6AH39	P07379;A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	0	IFHVNWFR	IFHVNWFR	2	IFHVNWFR2	5503.51	46444	
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	IFIAQPAWVLR	IFIAQPAWVLR	2	IFIAQPAWVLR2	7562.89	5527.83	8164.97
A0A8I5ZTB8	A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	IFIFDAR	IFIFDAR	2	IFIFDAR2			87463.8
A0A8I5ZTB8	A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	IFIFDARPSVNAVANK	IFIFDARPSVNAVANK	3	IFIFDARPSVNAVANK3	19151.8	20194.2	
P17136;P63164	P63164;P17136;A0A8I6A9Y5	RSMB_RAT;RSMN_RAT	Snrpb;Snrpn	Small nuclear ribonucleoprotein-associated protein B	0	IFIGTFK	IFIGTFK	2	IFIGTFK2	20127.2	15115.7	19498
O35397	O35397	CASP6_RAT	Casp6	Caspase-6	1	IFIIQACR	IFIIQAC(UniMod:4)R	2	IFIIQAC(UniMod:4)R2	113135	106265	127043
Q4QQR9	Q4QQR9	MEMO1_RAT	Memo1	Protein MEMO1	1	IFILGPSHHVPLSR	IFILGPSHHVPLSR	3	IFILGPSHHVPLSR3	13992.8	3791.16	
Q4QQR9	Q4QQR9	MEMO1_RAT	Memo1	Protein MEMO1	1	IFILGPSHHVPLSR	IFILGPSHHVPLSR	4	IFILGPSHHVPLSR4	11148.9	5337.45	795.008
Q920J4	Q920J4	TXNL1_RAT	Txnl1	Thioredoxin-like protein 1	1	IFINLPR	IFINLPR	2	IFINLPR2	627326	632522	619189
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	IFIQDQK	IFIQDQK	2	IFIQDQK2	82278.2	90507.2	83153
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	IFLAQKPAPLLESPFK	IFLAQKPAPLLESPFK	2	IFLAQKPAPLLESPFK2	13746.6	15664.9	6312.56
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	IFLAQKPAPLLESPFK	IFLAQKPAPLLESPFK	3	IFLAQKPAPLLESPFK3	107752	123030	123773
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	IFLAQKPAPLLESPFKDR	IFLAQKPAPLLESPFKDR	4	IFLAQKPAPLLESPFKDR4	32641.6	24198.6	19698
A0A8I6AEI1	A0A8I6AEI1	A0A8I6AEI1_RAT	Hps1	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1	1	IFLDANIK	IFLDANIK	2	IFLDANIK2	29163.8	25767.1	19570
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	IFLDESAPDNVLEVTAR	IFLDESAPDNVLEVTAR	2	IFLDESAPDNVLEVTAR2	21022.2	21042.9	17135
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	IFLHIHGLISADR	IFLHIHGLISADR	3	IFLHIHGLISADR3	3621.31	3783.73	
A0A8I5ZRT6	A0A8I5ZRT6	A0A8I5ZRT6_RAT	Dock2	Dedicator of cytokinesis 2	1	IFLICQIVR	IFLIC(UniMod:4)QIVR	2	IFLIC(UniMod:4)QIVR2		1986.69	
E9PU10	E9PU10	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	1	IFLISNFDLDAFDFPK	IFLISNFDLDAFDFPK	2	IFLISNFDLDAFDFPK2	16521.3		
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	IFLITLDNSDPNLK	IFLITLDNSDPNLK	2	IFLITLDNSDPNLK2	68997.4	84167.9	71633.4
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	IFLITLDNSDPNLK	IFLITLDNSDPNLK	3	IFLITLDNSDPNLK3	2766.33	3267.97	5738.88
Q05096	Q05096	MYO1B_RAT	Myo1b	Unconventional myosin-Ib	1	IFLLTNNNLLLADQK	IFLLTNNNLLLADQK	2	IFLLTNNNLLLADQK2	5069.73	8829.05	3772.48
Q68FP2	Q68FP2	PON3_RAT	Pon3	Serum paraoxonase/lactonase 3	1	IFLMDLNEPYPK	IFLMDLNEPYPK	2	IFLMDLNEPYPK2	51150.8	39198	49931.9
P19132	A0A8I5ZU81;P19132;A0A8I6AJZ3	FRIH_RAT	Fth1	Ferritin heavy chain	0	IFLQDIK	IFLQDIK	2	IFLQDIK2	55610.4	59026.1	34864.9
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	IFLQTLDTHHR	IFLQTLDTHHR	3	IFLQTLDTHHR3	45048.2	35955.4	23596.5
B2GUZ7	B2GUZ7	B2GUZ7_RAT	Tbcc	Tubulin folding cofactor C	1	IFLQVTSR	IFLQVTSR	2	IFLQVTSR2	8176.64	8615.08	7764.11
D3ZL10	D3ZL10	D3ZL10_RAT	Col6a6	Collagen type VI alpha 6 chain	1	IFLSEVVDMFNIAPHK	IFLSEVVDMFNIAPHK	3	IFLSEVVDMFNIAPHK3	3996.83	3078.93	1422.14
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	IFLSHEELEPDSIER	IFLSHEELEPDSIER	3	IFLSHEELEPDSIER3	94827.2	80122.2	79999.9
D3ZYT6	D3ZYT6	D3ZYT6_RAT	Treml1	Triggering receptor expressed on myeloid cells-like 1	1	IFLTDMGGGLLQVEMVSLQEEDTGK	IFLTDMGGGLLQVEMVSLQEEDTGK	3	IFLTDMGGGLLQVEMVSLQEEDTGK3	79150	51187.3	72471.5
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	IFMEEVPGGSLSSLLR	IFMEEVPGGSLSSLLR	2	IFMEEVPGGSLSSLLR2	43640.7	46203.2	29657.9
A0A8I6AEL0	A0A8I6AEL0;F1LUY7	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	0	IFMEQVPGGSLSALLR	IFMEQVPGGSLSALLR	2	IFMEQVPGGSLSALLR2	37611.3	40050.3	55787.6
A0A8I6AEL0	A0A8I6AEL0;F1LUY7	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	0	IFMEQVPGGSLSALLR	IFMEQVPGGSLSALLR	3	IFMEQVPGGSLSALLR3	5921.66	6810.28	8474.62
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	IFNAEVLFR	IFNAEVLFR	2	IFNAEVLFR2	10890.4	17467.5	7948.15
A0A8J8YPH6	A0A8J8YPH6	A0A8J8YPH6_RAT	Hps4	HPS4, biogenesis of lysosomal organelles complex 3 subunit 2	1	IFNALWNLDR	IFNALWNLDR	2	IFNALWNLDR2	68382	63507.9	60940.1
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	IFNETPINPR	IFNETPINPR	2	IFNETPINPR2	210488	212788	206261
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	IFNFEPLESQIK	IFNFEPLESQIK	2	IFNFEPLESQIK2	60773.2	76509.2	62650
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	IFNGRPAQK	IFNGRPAQK	2	IFNGRPAQK2	149429	171677	153297
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	IFNIPDEK	IFNIPDEK	2	IFNIPDEK2	176175	141801	147596
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	IFNIPDEKEAR	IFNIPDEKEAR	3	IFNIPDEKEAR3	2876.68	9759.25	6151.7
D3ZUQ1	D3ZUQ1	D3ZUQ1_RAT	Lipo1	Lipase	1	IFNLIYHK	IFNLIYHK	2	IFNLIYHK2	112242	103286	96657.8
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	IFNNVSK	IFNNVSK	2	IFNNVSK2	96683.7	83671.5	105334
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	IFNSFLHTALK	IFNSFLHTALK	3	IFNSFLHTALK3	1320.65	1142.64	2284.28
Q5PQX0	Q5PQX0	UXS1_RAT	Uxs1	UDP-glucuronic acid decarboxylase 1	1	IFNTFGPR	IFNTFGPR	2	IFNTFGPR2	42664.1	65664.9	53110
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	IFNTHTFCAGPAYLK	IFNTHTFC(UniMod:4)AGPAYLK	2	IFNTHTFC(UniMod:4)AGPAYLK2	142449	105476	104638
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	IFNTHTFCAGPAYLK	IFNTHTFC(UniMod:4)AGPAYLK	3	IFNTHTFC(UniMod:4)AGPAYLK3	5.01297e+06	4.02787e+06	3.99798e+06
A0A0G2K542	A0A0G2K542	A0A0G2K542_RAT	Ugp2	UTP--glucose-1-phosphate uridylyltransferase	1	IFNTNNLWISLAAVK	IFNTNNLWISLAAVK	2	IFNTNNLWISLAAVK2	6932.83	4944.62	4521.89
A0A0G2K542	A0A0G2K542	A0A0G2K542_RAT	Ugp2	UTP--glucose-1-phosphate uridylyltransferase	1	IFNTNNLWISLAAVK	IFNTNNLWISLAAVK	3	IFNTNNLWISLAAVK3	2905.8	3288.48	2816.85
P08462	P08462	GRPB_RAT	Grpcb	Submandibular gland secretory Glx-rich protein CB	1	IFPFFIYR	IFPFFIYR	2	IFPFFIYR2	23860.2	53944.4	40997.7
D3ZZ21	D3ZZ21	D3ZZ21_RAT	Ndufb6	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6	1	IFPGDTILETGEVIPPMR	IFPGDTILETGEVIPPMR	3	IFPGDTILETGEVIPPMR3	18344.5	39670.8	38251.6
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	IFPLLGLHEDGLSK	IFPLLGLHEDGLSK	3	IFPLLGLHEDGLSK3	36034.7	45570.5	49353
P40112	A0A8I5ZRG0;P40112	PSB3_RAT	Psmb3	Proteasome subunit beta type-3	0	IFPMGDR	IFPMGDR	2	IFPMGDR2	664572	816707	772094
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	IFPSVIK	IFPSVIK	2	IFPSVIK2	29382.9	22915.2	34977
A0A8I5Y6A1	A0A8I5Y6A1	A0A8I5Y6A1_RAT	Ablim1	Actin-binding LIM protein 1	1	IFPYEMLMVTNR	IFPYEMLMVTNR	2	IFPYEMLMVTNR2	10258.9	7290.66	11695.5
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	IFQAENAK	IFQAENAK	2	IFQAENAK2	73863.7	64450.4	75308.2
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	IFQALCK	IFQALC(UniMod:4)K	2	IFQALC(UniMod:4)K2	25770.9	45853.8	50516.4
P97849	P97849	S27A1_RAT	Slc27a1	Long-chain fatty acid transport protein 1	1	IFQAVAQR	IFQAVAQR	2	IFQAVAQR2	15979.4	21313.1	20958.9
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	IFQDYPLQESYAPVVMKPK	IFQDYPLQESYAPVVMKPK	3	IFQDYPLQESYAPVVMKPK3	3736.25	3529.56	7130.64
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	IFQEALIQITLPTVQK	IFQEALIQITLPTVQK	2	IFQEALIQITLPTVQK2	17182.6	24373.5	13170.7
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	IFQEALIQITLPTVQK	IFQEALIQITLPTVQK	3	IFQEALIQITLPTVQK3	10720.4	14403.3	6962.99
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	IFQIHTSR	IFQIHTSR	2	IFQIHTSR2	12297.8	10317	10897.1
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	IFQILYANEGECR	IFQILYANEGEC(UniMod:4)R	2	IFQILYANEGEC(UniMod:4)R2	11240	8034.93	8607.79
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	IFQILYANEGECRK	IFQILYANEGEC(UniMod:4)RK	3	IFQILYANEGEC(UniMod:4)RK3	12225.5	8079.45	10250.2
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	IFQILYANEGESK	IFQILYANEGESK	2	IFQILYANEGESK2	27531.2	27460.5	30422
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	IFQILYANEGESK	IFQILYANEGESK	3	IFQILYANEGESK3	1782.42	1565.14	4537.23
Q6TA25	Q6TA25	FGOP2_RAT	Fgfr1op2	FGFR1 oncogene partner 2 homolog	1	IFQLEQENK	IFQLEQENK	2	IFQLEQENK2	101105	84322.2	94374
Q4G002	Q4G002	Q4G002_RAT	RT1-T24-4	Histocompatibility 2, T region locus 24	1	IFQLSLR	IFQLSLR	2	IFQLSLR2	139987	94026.6	106977
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	IFQMDEGLSHITPR	IFQMDEGLSHITPR	3	IFQMDEGLSHITPR3	60760.9	63652.4	63480.9
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	IFQNAPTDPTQDFSTQVAK	IFQNAPTDPTQDFSTQVAK	3	IFQNAPTDPTQDFSTQVAK3	129505	136298	146887
Q63321	Q63321	PLOD1_RAT	Plod1	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1	1	IFQNLDGALDEVVLK	IFQNLDGALDEVVLK	2	IFQNLDGALDEVVLK2	4879.39		3972.8
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	IFQNLNGALDEVVLK	IFQNLNGALDEVVLK	2	IFQNLNGALDEVVLK2	17621.6	14930.7	13764.7
P02764	P02764	A1AG_RAT	Orm1	Alpha-1-acid glycoprotein	1	IFQQAVK	IFQQAVK	1	IFQQAVK1	4611.6	1934.45	1080.08
P02764	P02764	A1AG_RAT	Orm1	Alpha-1-acid glycoprotein	1	IFQQAVK	IFQQAVK	2	IFQQAVK2	315351	290416	273805
B2GV71	B2GV71	NDUF5_RAT	Ndufaf5	Arginine-hydroxylase NDUFAF5, mitochondrial	1	IFQTDIAEHALK	IFQTDIAEHALK	3	IFQTDIAEHALK3	2800.72	2986.3	3910.66
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	IFQWQNVDLPGGLHQLSFPLSVEPALGIYK	IFQWQNVDLPGGLHQLSFPLSVEPALGIYK	4	IFQWQNVDLPGGLHQLSFPLSVEPALGIYK4	309856	308209	265448
P53610	P53610	PGTB1_RAT	Pggt1b	Geranylgeranyl transferase type-1 subunit beta	1	IFQYTNFEK	IFQYTNFEK	2	IFQYTNFEK2	17489.6	6684.52	14492.8
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	IFRDGEEAGAYDGPR	IFRDGEEAGAYDGPR	2	IFRDGEEAGAYDGPR2	13206.5	13332.4	8380.67
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	IFRDGEEAGAYDGPR	IFRDGEEAGAYDGPR	3	IFRDGEEAGAYDGPR3	145310	171594	194191
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	IFRQPQGHLLLIGVSGAGK	IFRQPQGHLLLIGVSGAGK	4	IFRQPQGHLLLIGVSGAGK4	3220.42	10421.1	6816.77
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	IFSAEIIYHLFDAFTK	IFSAEIIYHLFDAFTK	3	IFSAEIIYHLFDAFTK3	2872.44		
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	IFSAYIK	IFSAYIK	1	IFSAYIK1	4360.01	1395.42	3972.61
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	IFSAYIK	IFSAYIK	2	IFSAYIK2	851205	830360	717918
Q5RJQ4	Q5RJQ4	SIR2_RAT	Sirt2	NAD-dependent protein deacetylase sirtuin-2	1	IFSEATPK	IFSEATPK	2	IFSEATPK2	48785.4	71889.5	50579.4
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	IFSELNSTEMHLIIVR	IFSELNSTEMHLIIVR	3	IFSELNSTEMHLIIVR3	12387.2	24851.5	12520.6
Q4QQU7	Q4QQU7	GRTP1_RAT	Grtp1	Growth hormone-regulated TBC protein 1	1	IFSEPGSLSMATITR	IFSEPGSLSMATITR	2	IFSEPGSLSMATITR2	8000.6	6501.65	12605.5
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	IFSFAHQTISALIK	IFSFAHQTISALIK	3	IFSFAHQTISALIK3	7214.13	5712.72	2748.8
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	IFSFSADSELEK	IFSFSADSELEK	2	IFSFSADSELEK2	3785.33	6472.94	9620.15
F7F288	F7F288	F7F288_RAT	Bcap29	B-cell receptor-associated protein	1	IFSFSVWTK	IFSFSVWTK	2	IFSFSVWTK2	12433.8	6543.77	10539.1
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	IFSGGEDLDQEEK	IFSGGEDLDQEEK	2	IFSGGEDLDQEEK2	51647.5	53055.7	56626.1
B1H264	B1H264	B1H264_RAT	Tbc1d17	TBC1 domain family, member 17	1	IFSGGLSPGLR	IFSGGLSPGLR	2	IFSGGLSPGLR2	7179.62	7549.38	7532.29
P60892	A0A0G2JSV3;M0RBK1;P60892	PRPS1_RAT	Prps1	Ribose-phosphate pyrophosphokinase 1	0	IFSGSSHQDLSQK	IFSGSSHQDLSQK	2	IFSGSSHQDLSQK2	8034.25	2337.45	5857.49
P60892	A0A0G2JSV3;M0RBK1;P60892	PRPS1_RAT	Prps1	Ribose-phosphate pyrophosphokinase 1	0	IFSGSSHQDLSQK	IFSGSSHQDLSQK	3	IFSGSSHQDLSQK3	116115	101481	87500.4
Q9QYW3	Q9QYW3	PHOCN_RAT	Mob4	MOB-like protein phocein	1	IFSHAYFHHR	IFSHAYFHHR	2	IFSHAYFHHR2	6174.69	731.29	2791.02
Q9QYW3	Q9QYW3	PHOCN_RAT	Mob4	MOB-like protein phocein	1	IFSHAYFHHR	IFSHAYFHHR	3	IFSHAYFHHR3	20388.7	30506.6	33285.9
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	IFSHDIIR	IFSHDIIR	2	IFSHDIIR2	4743.6		5800.57
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	IFSIIAEGEMHEAIK	IFSIIAEGEMHEAIK	3	IFSIIAEGEMHEAIK3	47452.3	43903	44916.6
A0A8J8YFS5	A0A8J8YFS5	A0A8J8YFS5_RAT	Hars1	Histidine--tRNA ligase, cytoplasmic	1	IFSIVEQK	IFSIVEQK	2	IFSIVEQK2	20913.7	24384	25500.8
F1LUU1	F1LUU1	F1LUU1_RAT	Itga11	Integrin subunit alpha 11	1	IFSLEGTNK	IFSLEGTNK	2	IFSLEGTNK2		8600.16	10422.5
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	IFSLQVR	IFSLQVR	2	IFSLQVR2	8.5083e+06	9.13717e+06	1.04594e+07
O88387	O88387	FGD4_RAT	Fgd4	FYVE, RhoGEF and PH domain-containing protein 4	1	IFSNISSINAFHSK	IFSNISSINAFHSK	3	IFSNISSINAFHSK3	1381.95	1268.68	1661.53
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	IFSNLEDILQLHVGLNEQMK	IFSNLEDILQLHVGLNEQMK	3	IFSNLEDILQLHVGLNEQMK3	16503.9	27986.1	23520.1
F7FL28	F7FL28	F7FL28_RAT	Napsa	Napsin A aspartic peptidase	1	IFSPLYGWEQR	IFSPLYGWEQR	2	IFSPLYGWEQR2	34242.6	27746.6	22964.4
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	IFSQMNNIMSK	IFSQMNNIMSK	2	IFSQMNNIMSK2	19598.6	21297.2	23234.4
P05545	A0A0G2JSK1;P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	0	IFSQQADLSR	IFSQQADLSR	2	IFSQQADLSR2	7.39487e+06	6.90204e+06	6.48083e+06
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	IFSSAEALVQSFR	IFSSAEALVQSFR	2	IFSSAEALVQSFR2	14717.9	15023.8	15391.1
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	IFSSAEALVQSFR	IFSSAEALVQSFR	3	IFSSAEALVQSFR3	1282.28	4268.67	5859.51
P15650	P15650	ACADL_RAT	Acadl	Long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	IFSSEHDIFR	IFSSEHDIFR	2	IFSSEHDIFR2	24020.9	22408.2	17271.5
P15650	P15650	ACADL_RAT	Acadl	Long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	IFSSEHDIFR	IFSSEHDIFR	3	IFSSEHDIFR3	111120	183989	195443
Q5XIP1	Q5XIP1	PELO_RAT	Pelo	Protein pelota homolog	1	IFSSLHVSGEQLGQLTGVAAILR	IFSSLHVSGEQLGQLTGVAAILR	3	IFSSLHVSGEQLGQLTGVAAILR3	13039.8	8738.51	9795.01
D3ZXK7	D3ZXK7	RN123_RAT	Rnf123	E3 ubiquitin-protein ligase RNF123	1	IFSSPDHGTPAATSR	IFSSPDHGTPAATSR	3	IFSSPDHGTPAATSR3	48190.7	60385.5	44651.2
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	IFSSVQWLSGVK	IFSSVQWLSGVK	2	IFSSVQWLSGVK2	26420.3	23736.5	30361.3
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	IFSSVQWLSGVKPVLSTK	IFSSVQWLSGVKPVLSTK	3	IFSSVQWLSGVKPVLSTK3	304102	324107	341463
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	IFSTSADLSELSAVAR	IFSTSADLSELSAVAR	2	IFSTSADLSELSAVAR2	18951.5	13987.1	17996.3
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	IFSTSADLSELSAVAR	IFSTSADLSELSAVAR	3	IFSTSADLSELSAVAR3	2.23404e+06	2.57447e+06	2.61818e+06
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	IFSVITK	IFSVITK	1	IFSVITK1	11641.1	4664.85	2859.28
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	IFSVITK	IFSVITK	2	IFSVITK2	970556	958316	983804
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	IFSVSSPGSVTYDGK	IFSVSSPGSVTYDGK	2	IFSVSSPGSVTYDGK2	57446.8	63607	68144.6
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	IFSVYCDQETSLGGWLLIQQR	IFSVYC(UniMod:4)DQETSLGGWLLIQQR	3	IFSVYC(UniMod:4)DQETSLGGWLLIQQR3	128863	128007	124496
A0A8I6ACU2	A0A8I6ACU2	A0A8I6ACU2_RAT	Ubap2l	Ubiquitin associated protein 2-like	1	IFTASNVSSVPLPAENVTITAGQR	IFTASNVSSVPLPAENVTITAGQR	3	IFTASNVSSVPLPAENVTITAGQR3	10127.9	4320.65	10859.9
A1EC81	A1EC81	A1EC81_RAT	Mmp28	Matrix metallopeptidase 28	1	IFTDFEAWDPHNSQSR	IFTDFEAWDPHNSQSR	3	IFTDFEAWDPHNSQSR3	9895.45		17979.2
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	IFTEDLPEVESLPR	IFTEDLPEVESLPR	2	IFTEDLPEVESLPR2	10146.3		17469.1
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	IFTFAEK	IFTFAEK	2	IFTFAEK2	29368	26322.6	20254.1
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	IFTGSLLVEEK	IFTGSLLVEEK	2	IFTGSLLVEEK2	24487.5	24080.5	21321.5
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	IFTIESAR	IFTIESAR	2	IFTIESAR2	630590	690229	503879
B0BNJ4	B0BNJ4	B0BNJ4_RAT	Ethe1	ETHE1, persulfide dioxygenase	1	IFTLPGNCLIYPAHDYHGLTVSTVEEER	IFTLPGNC(UniMod:4)LIYPAHDYHGLTVSTVEEER	4	IFTLPGNC(UniMod:4)LIYPAHDYHGLTVSTVEEER4	20985	17810.3	8909.98
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	IFTMAEVYGIR	IFTMAEVYGIR	2	IFTMAEVYGIR2	17738	30192.1	36375.4
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	IFTNLYGR	IFTNLYGR	2	IFTNLYGR2	40661.5	57895.2	57748.7
O35162	O35162	HSP13_RAT	Hspa13	Heat shock 70 kDa protein 13	1	IFTPEELEAEIGR	IFTPEELEAEIGR	2	IFTPEELEAEIGR2	12373.8	6951.22	9433.36
O35162	O35162	HSP13_RAT	Hspa13	Heat shock 70 kDa protein 13	1	IFTPEELEAEIGRYPFK	IFTPEELEAEIGRYPFK	3	IFTPEELEAEIGRYPFK3	16093.2	16466.1	16510.9
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	IFTPLLHK	IFTPLLHK	2	IFTPLLHK2	32411.5	17991.5	22525.3
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	IFTPQTNPR	IFTPQTNPR	2	IFTPQTNPR2	3.47462e+06	3.00643e+06	3.06092e+06
G3V6G7	G3V6G7	G3V6G7_RAT	Pnpt1	polyribonucleotide nucleotidyltransferase	1	IFTPSAEIVK	IFTPSAEIVK	2	IFTPSAEIVK2	6602.54	5978.78	7120.24
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	IFTTGDVNK	IFTTGDVNK	2	IFTTGDVNK2	348242	293395	300486
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	IFTTGDVNKDGK	IFTTGDVNKDGK	2	IFTTGDVNKDGK2	16533.8	9759.22	15413
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	IFTTGDVNKDGK	IFTTGDVNKDGK	3	IFTTGDVNKDGK3	131421	145033	163360
Q63632	Q63633;Q63632	S12A4_RAT	Slc12a4	Solute carrier family 12 member 4	0	IFTVAQMDDNSIQMK	IFTVAQMDDNSIQMK	2	IFTVAQMDDNSIQMK2	4102.04	3351.96	4912.17
P01026	P01026	CO3_RAT	C3	Complement C3	1	IFTVDNNLLPVGK	IFTVDNNLLPVGK	2	IFTVDNNLLPVGK2	2.11054e+06	1.66614e+06	2.16886e+06
P01026	P01026	CO3_RAT	C3	Complement C3	1	IFTVDNNLLPVGK	IFTVDNNLLPVGK	3	IFTVDNNLLPVGK3	19879.2	21587	20136.8
D3ZYB4	D3ZYB4;A0A0G2JW03	D3ZYB4_RAT	Lpin2	phosphatidate phosphatase	0	IFTVNPK	IFTVNPK	2	IFTVNPK2	27954.8	23279.1	13937.9
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	IFVDIEK	IFVDIEK	2	IFVDIEK2	133856	123467	130314
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	IFVDIEKLPWSK	IFVDIEKLPWSK	2	IFVDIEKLPWSK2	3526.72	4999.05	2303.63
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	IFVDIEKLPWSK	IFVDIEKLPWSK	3	IFVDIEKLPWSK3	72327.6	78819.9	71133.8
A0A8I5ZVU1	A0A8I5ZVU1	A0A8I5ZVU1_RAT	Uckl1	Uridine-cytidine kinase	1	IFVDTDSDIR	IFVDTDSDIR	2	IFVDTDSDIR2	9869.48	9409.7	13886.2
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	IFVEASLNGGCK	IFVEASLNGGC(UniMod:4)K	2	IFVEASLNGGC(UniMod:4)K2		1566.04	
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	IFVFEPPPGVK	IFVFEPPPGVK	2	IFVFEPPPGVK2	172211	205016	168138
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	IFVFEPPPGVK	IFVFEPPPGVK	3	IFVFEPPPGVK3	7417.14	9404.75	9890.74
A0A8I6A4I6	A0A8I6A4I6	A0A8I6A4I6_RAT	ENSRNOG00000067246	RRM domain-containing protein	1	IFVGGIPHNCGETELR	IFVGGIPHNC(UniMod:4)GETELR	3	IFVGGIPHNC(UniMod:4)GETELR3	18912.3	12975.4	14482
D3ZGE9	M0R7T6;D3ZGE9	D3ZGE9_RAT	Rbm38	RNA binding motif protein 38	0	IFVGGLPYHTTDASLR	IFVGGLPYHTTDASLR	3	IFVGGLPYHTTDASLR3	35358	31675.1	35047.7
D3ZGE9	M0R7T6;D3ZGE9	D3ZGE9_RAT	Rbm38	RNA binding motif protein 38	0	IFVGGLPYHTTDASLRK	IFVGGLPYHTTDASLRK	4	IFVGGLPYHTTDASLRK4	14070.2	19717.9	20835.1
A0A8I6AQW7	A0A8I6AQW7	A0A8I6AQW7_RAT	Msi2	Musashi RNA-binding protein 2	1	IFVGGLSANTVVEDVK	IFVGGLSANTVVEDVK	2	IFVGGLSANTVVEDVK2	2533.59		
Q9JJ54	Q9JJ54	HNRPD_RAT	Hnrnpd	Heterogeneous nuclear ribonucleoprotein D0	1	IFVGGLSPDTPEEK	IFVGGLSPDTPEEK	2	IFVGGLSPDTPEEK2	12197	2522.5	2723.52
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	IFVGLCQVGAWGCFDEFNR	IFVGLC(UniMod:4)QVGAWGC(UniMod:4)FDEFNR	3	IFVGLC(UniMod:4)QVGAWGC(UniMod:4)FDEFNR3		2934.11	5055.56
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	IFVGLCQVGAWGCFDEFNRLEER	IFVGLC(UniMod:4)QVGAWGC(UniMod:4)FDEFNRLEER	3	IFVGLC(UniMod:4)QVGAWGC(UniMod:4)FDEFNRLEER3	20545.8	15700.3	12212.1
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	IFVIFHDTQALPTHLITCK	IFVIFHDTQALPTHLITC(UniMod:4)K	4	IFVIFHDTQALPTHLITC(UniMod:4)K4	6789.38	6372.17	6102.03
D3ZXJ5	D3ZXJ5	D3ZXJ5_RAT	Efl1	Elongation factor like GTPase 1	1	IFVLGPK	IFVLGPK	2	IFVLGPK2	18344	19262.7	18031
O08618	O08618	KPRB_RAT	Prpsap2	Phosphoribosyl pyrophosphate synthase-associated protein 2	1	IFVMATHGLLSSDAPR	IFVMATHGLLSSDAPR	3	IFVMATHGLLSSDAPR3	18500	20910.5	33755.2
Q9JIL3	Q9JIL3	ILF3_RAT	Ilf3	Interleukin enhancer-binding factor 3	1	IFVNDDR	IFVNDDR	2	IFVNDDR2	16405.9	13043.5	13988.9
Q6AXW1	Q6AXW1	GLRX2_RAT	Glrx2	Glutaredoxin-2, mitochondrial	1	IFVNGIFIGGAADTHR	IFVNGIFIGGAADTHR	3	IFVNGIFIGGAADTHR3	10559.1	6352.44	19598.2
Q8CIZ5	F1LVL9;Q8CIZ5	DMBT1_RAT	Dmbt1	Deleted in malignant brain tumors 1 protein	0	IFVSSMNR	IFVSSMNR	2	IFVSSMNR2	1.65161e+06	2.15899e+06	1.84688e+06
G3V9L1	G3V9L1	G3V9L1_RAT	Tex2	Testis expressed 2	1	IFWDFLGEK	IFWDFLGEK	2	IFWDFLGEK2	20472.7	14872.9	20716.6
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	IFWEVFHELPLEK	IFWEVFHELPLEK	3	IFWEVFHELPLEK3	8692.14	15068.6	12707.9
A0A8I5Y153	A0A8I5Y153	A0A8I5Y153_RAT	Llgl2	LLGL scribble cell polarity complex component 2	1	IFWLTTR	IFWLTTR	2	IFWLTTR2	7800.9	6277.1	5176.27
Q9QX79	Q9QX79	FETUB_RAT	Fetub	Fetuin-B	1	IFYETVHGQCK	IFYETVHGQC(UniMod:4)K	2	IFYETVHGQC(UniMod:4)K2	147994	113221	111055
Q9QX79	Q9QX79	FETUB_RAT	Fetub	Fetuin-B	1	IFYETVHGQCK	IFYETVHGQC(UniMod:4)K	3	IFYETVHGQC(UniMod:4)K3	2.30045e+06	2.34506e+06	2.42962e+06
Q5XI81	Q5XI81	FXR1_RAT	Fxr1	RNA-binding protein FXR1	1	IFYHPETTQLMILSASEATVK	IFYHPETTQLMILSASEATVK	3	IFYHPETTQLMILSASEATVK3	20861.2	25995.1	28017.4
A0A8I6AJ04	A0A8I6AJ04	A0A8I6AJ04_RAT	Pithd1	PITH domain containing 1	1	IFYIGLR	IFYIGLR	2	IFYIGLR2	24720.5	28727	22501.6
Q923V4	Q923V4	FBX6_RAT	Fbxo6	F-box only protein 6	1	IFYILCSLQR	IFYILC(UniMod:4)SLQR	2	IFYILC(UniMod:4)SLQR2	54757.1	52332.1	50982.5
P97689	P97689	UT1_RAT	Slc14a1	Urea transporter 1	1	IFYLQNK	IFYLQNK	1	IFYLQNK1	9705.93	9160.8	10736.8
P97689	P97689	UT1_RAT	Slc14a1	Urea transporter 1	1	IFYLQNK	IFYLQNK	2	IFYLQNK2	1.53069e+06	1.49751e+06	1.46284e+06
Q5XIT9	Q5XIT9	MCCB_RAT	Mccc2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	1	IFYNQAIMSSK	IFYNQAIMSSK	2	IFYNQAIMSSK2	27842.7	21229.2	26024
Q8K3R4	Q8K3R4	Q8K3R4_RAT	Adipoq	Adiponectin d	1	IFYNQQNHYDGSTGK	IFYNQQNHYDGSTGK	3	IFYNQQNHYDGSTGK3	35776.3	32425.5	27810.5
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	IFYPETTDIYDR	IFYPETTDIYDR	2	IFYPETTDIYDR2	52468.7	29592.7	40591.9
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	IFYPETTDIYDRK	IFYPETTDIYDRK	2	IFYPETTDIYDRK2	2337.42	3086.56	
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	IFYPETTDIYDRK	IFYPETTDIYDRK	3	IFYPETTDIYDRK3	55984.2	64304.6	64888.6
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	IFYPETTDVYDR	IFYPETTDVYDR	2	IFYPETTDVYDR2	16785.2	18976.3	16179.7
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	IFYPETTDVYDRK	IFYPETTDVYDRK	3	IFYPETTDVYDRK3	49068.3	74648.9	56053.5
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	IFYQTCR	IFYQTC(UniMod:4)R	2	IFYQTC(UniMod:4)R2	15911.3	22140.5	10575.7
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	IFYVNYLSELSEHVK	IFYVNYLSELSEHVK	2	IFYVNYLSELSEHVK2	10042.6	7843.97	7072.06
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	IFYVNYLSELSEHVK	IFYVNYLSELSEHVK	3	IFYVNYLSELSEHVK3	36348	32752.1	50953.8
A0A8I6A182	A0A8I6A182	A0A8I6A182_RAT	Pitpnc1	Phosphatidylinositol transfer protein, cytoplasmic 1	1	IFYVTEK	IFYVTEK	2	IFYVTEK2	49758.4	60243.3	68793.8
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	IGACFLR	IGAC(UniMod:4)FLR	2	IGAC(UniMod:4)FLR2	12394.6	16279.2	13608.2
Q62714	Q62714	DEF4_RAT	Np4	Defensin alpha 4	1	IGACVSGER	IGAC(UniMod:4)VSGER	2	IGAC(UniMod:4)VSGER2	15095.5	16841.4	17664.6
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	IGADDDTSRDPSQR	IGADDDTSRDPSQR	2	IGADDDTSRDPSQR2	18443.6	18923	13501.1
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	IGADDDTSRDPSQR	IGADDDTSRDPSQR	3	IGADDDTSRDPSQR3	96354.4	116344	97486.2
P13221	P13221	AATC_RAT	Got1	Aspartate aminotransferase, cytoplasmic	1	IGADFLGR	IGADFLGR	2	IGADFLGR2	58715.2	55641	68147.5
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	IGADGTQVAMVQFTDDPR	IGADGTQVAMVQFTDDPR	2	IGADGTQVAMVQFTDDPR2	1798.89	10245	2444.16
P04764	M0R5J4;A0A8I6ASH7;P04764;A0A8I5YC61	ENOA_RAT	Eno1	Alpha-enolase	0	IGAEVYHNLK	IGAEVYHNLK	2	IGAEVYHNLK2	79706.8	52984.8	49492.9
P04764	M0R5J4;A0A8I6ASH7;P04764;A0A8I5YC61	ENOA_RAT	Eno1	Alpha-enolase	0	IGAEVYHNLK	IGAEVYHNLK	3	IGAEVYHNLK3	899847	775721	894913
O08984	O08984	LBR_RAT	Lbr	Delta(14)-sterol reductase LBR	1	IGAFDLK	IGAFDLK	2	IGAFDLK2	21015.1	18226.6	16708.9
P61589	P61589	RHOA_RAT	Rhoa	Transforming protein RhoA	1	IGAFGYMECSAK	IGAFGYMEC(UniMod:4)SAK	2	IGAFGYMEC(UniMod:4)SAK2	1.00473e+06	1.03385e+06	1.2354e+06
Q99N37	Q99N37	RHG17_RAT	Arhgap17	Rho GTPase-activating protein 17	1	IGAGASK	IGAGASK	1	IGAGASK1			16518.4
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	IGALGFSGAFEDRDPTQFEER	IGALGFSGAFEDRDPTQFEER	3	IGALGFSGAFEDRDPTQFEER3	51038.5	63469.5	74293.6
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	IGALQGAVDR	IGALQGAVDR	2	IGALQGAVDR2		29106.4	20467.1
Q68FT9	Q68FT9	SCLY_RAT	Scly	Selenocysteine lyase	1	IGALYVR	IGALYVR	2	IGALYVR2	15180.8	11493.2	14182.7
A0A8I5ZLY4	A0A8I5ZLY4	A0A8I5ZLY4_RAT	Stk38	Serine/threonine kinase 38	1	IGAPGVEEIK	IGAPGVEEIK	2	IGAPGVEEIK2	7036.86		9045.38
A0A8I5Y1D5	A0A8I5Y1D5	A0A8I5Y1D5_RAT	Mtmr1	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	IGAQSHGDNSCGIEIVCK	IGAQSHGDNSC(UniMod:4)GIEIVC(UniMod:4)K	3	IGAQSHGDNSC(UniMod:4)GIEIVC(UniMod:4)K3	2179.08	2927.66	4052.84
F1M1H0	F1M1H0	F1M1H0_RAT	Dera	deoxyribose-phosphate aldolase	1	IGASSLLSDIER	IGASSLLSDIER	2	IGASSLLSDIER2	35957.1	39322	44286.9
Q498R3	Q498R3	DJC10_RAT	Dnajc10	DnaJ homolog subfamily C member 10	1	IGAVNCGDDR	IGAVNC(UniMod:4)GDDR	2	IGAVNC(UniMod:4)GDDR2	20747.5	22954.2	19874.4
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	IGAVTLSPQLGNAVQK	IGAVTLSPQLGNAVQK	2	IGAVTLSPQLGNAVQK2	164908	172296	171546
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	IGAVTLSPQLGNAVQK	IGAVTLSPQLGNAVQK	3	IGAVTLSPQLGNAVQK3	47574.4	42176.5	51353.7
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	IGAYLAER	IGAYLAER	2	IGAYLAER2	63108.4	63942.9	64304.6
A0A8I5ZNI3	A0A8I5ZNI3	A0A8I5ZNI3_RAT	Glipr1	GLI pathogenesis-related 1	1	IGCAVQLCPR	IGC(UniMod:4)AVQLC(UniMod:4)PR	2	IGC(UniMod:4)AVQLC(UniMod:4)PR2	142472	134343	140018
Q62763	Q62762;Q62763;Q62761	KC1G3_RAT	Csnk1g3	Casein kinase I isoform gamma-3	0	IGCGNFGELR	IGC(UniMod:4)GNFGELR	2	IGC(UniMod:4)GNFGELR2	51343.2	53328	48118
A0A8I6A263	A0A8I6A263	A0A8I6A263_RAT	Aimp1	Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	1	IGCIVTAK	IGC(UniMod:4)IVTAK	2	IGC(UniMod:4)IVTAK2	87759.6	100768	106366
Q5XIJ5	Q5XIJ5	AB17A_RAT	Abhd17a	Alpha/beta hydrolase domain-containing protein 17A	1	IGCNIFSYDYSGYGISSGRPSEK	IGC(UniMod:4)NIFSYDYSGYGISSGRPSEK	3	IGC(UniMod:4)NIFSYDYSGYGISSGRPSEK3	12647.1	11653.5	5899.49
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	IGCPGDHFFLLNHILR	IGC(UniMod:4)PGDHFFLLNHILR	4	IGC(UniMod:4)PGDHFFLLNHILR4	1282.75	2770.31	1315.78
D3ZRI9	D3ZRI9	D3ZRI9_RAT	Gan	Gigaxonin	1	IGCYAAMK	IGC(UniMod:4)YAAMK	2	IGC(UniMod:4)YAAMK2	16923.7	17076.1	19617.5
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	IGCYVTVFQNISNLR	IGC(UniMod:4)YVTVFQNISNLR	2	IGC(UniMod:4)YVTVFQNISNLR2	2.14023e+06	2.11738e+06	2.55428e+06
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	IGCYVTVFQNISNLR	IGC(UniMod:4)YVTVFQNISNLR	3	IGC(UniMod:4)YVTVFQNISNLR3	1.20391e+06	1.32561e+06	1.37136e+06
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	IGCYVTVFQNISNLRDVFYR	IGC(UniMod:4)YVTVFQNISNLRDVFYR	3	IGC(UniMod:4)YVTVFQNISNLRDVFYR3	36405	25862.2	22229.2
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	IGDDDRGSWR	IGDDDRGSWR	3	IGDDDRGSWR3	67710.9	114126	122099
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	IGDEYFTFITDCK	IGDEYFTFITDC(UniMod:4)K	2	IGDEYFTFITDC(UniMod:4)K2	12723.6	3808.99	12014
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	IGDEYFTFITDCKDPK	IGDEYFTFITDC(UniMod:4)KDPK	2	IGDEYFTFITDC(UniMod:4)KDPK2	18330.1	22073.9	16600.8
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	IGDEYFTFITDCKDPK	IGDEYFTFITDC(UniMod:4)KDPK	3	IGDEYFTFITDC(UniMod:4)KDPK3	35256.7	37407.2	32627.1
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	IGDFGLAK	IGDFGLAK	2	IGDFGLAK2	30686.7	29225.1	15948.3
Q00495	Q63454;P27704;Q00495;Q63132	CSF1R_RAT	Csf1r	Macrophage colony-stimulating factor 1 receptor	0	IGDFGLAR	IGDFGLAR	2	IGDFGLAR2	7471.99	10742.1	13447.7
D4A7V9	D4A7V9	E2AK4_RAT	Eif2ak4	eIF-2-alpha kinase GCN2	1	IGDFGLATDHLAFNAEGK	IGDFGLATDHLAFNAEGK	3	IGDFGLATDHLAFNAEGK3	11269.1		4287.33
P14056	A0A8I6ATH0;P14056;P11345	ARAF_RAT	Araf	Serine/threonine-protein kinase A-Raf	0	IGDFGLATVK	IGDFGLATVK	2	IGDFGLATVK2	85860.1	89958.2	70118.7
Q5U2X5	Q5U2X5	ACK1_RAT	Tnk2	Activated CDC42 kinase 1	1	IGDFGLMR	IGDFGLMR	2	IGDFGLMR2	24572.4	22989.7	24403.3
Q62689	A0A8I6AM23;Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	0	IGDFGLTK	IGDFGLTK	2	IGDFGLTK2	171477	150765	167456
P15127	P15127;P24062;Q64716	INSR_RAT	Insr	Insulin receptor	0	IGDFGMTR	IGDFGMTR	2	IGDFGMTR2	13946.6	14723.6	10200.9
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	IGDGGQEPTTGNWR	IGDGGQEPTTGNWR	2	IGDGGQEPTTGNWR2	65945.9	56227.5	67753.3
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	IGDGMNAYVAYK	IGDGMNAYVAYK	2	IGDGMNAYVAYK2	97810.7	132057	112920
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	IGDLAPQDMK	IGDLAPQDMK	2	IGDLAPQDMK2	42993.6	52514.8	54623.4
P60517	P60517	GBRAP_RAT	Gabarap	Gamma-aminobutyric acid receptor-associated protein	1	IGDLDKK	IGDLDKK	2	IGDLDKK2	201960	523352	511243
B1WBT4	A0A0G2KAH6;B1WBT4;Q4KLN3	B1WBT4_RAT	Srpk2	SRSF protein kinase 2	0	IGDLFNGR	IGDLFNGR	2	IGDLFNGR2	20495.9	25599.2	26395
Q7TPK6	Q9JIH7;A0A8I6AC38;Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	0	IGDLGLATLK	IGDLGLATLK	2	IGDLGLATLK2	82007.9	72523.2	84282.5
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	IGDLQAFVGPEAR	IGDLQAFVGPEAR	2	IGDLQAFVGPEAR2	109225	101380	99828.8
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	IGDLQAFVGPEAR	IGDLQAFVGPEAR	3	IGDLQAFVGPEAR3	4634.47	5081.4	3912.75
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	IGDLQSEIVGLLK	IGDLQSEIVGLLK	2	IGDLQSEIVGLLK2	18571	23877.9	51186.4
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	IGDNLDILNLLK	IGDNLDILNLLK	2	IGDNLDILNLLK2	9474.4	9027.94	13600.8
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	IGDPLLEDTR	IGDPLLEDTR	2	IGDPLLEDTR2	116641	109239	119035
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	IGDPPQALPEEPMEVQGAER	IGDPPQALPEEPMEVQGAER	3	IGDPPQALPEEPMEVQGAER3	28070.2	42621.2	12012.2
Q5U2U2	Q5U2U2	CRKL_RAT	Crkl	Crk-like protein	1	IGDQEFDHLPALLEFYK	IGDQEFDHLPALLEFYK	3	IGDQEFDHLPALLEFYK3	38429.2	43964.9	42303.7
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	IGDQWDK	IGDQWDK	1	IGDQWDK1	1.74821e+06	2.27954e+06	2.09907e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	IGDQWDK	IGDQWDK	2	IGDQWDK2	2.24173e+07	2.62791e+07	2.40313e+07
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	IGDQWDKQHDLGHMMR	IGDQWDKQHDLGHMMR	3	IGDQWDKQHDLGHMMR3	41279.2	33318.9	32561.1
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	IGDQWDKQHDLGHMMR	IGDQWDKQHDLGHMMR	4	IGDQWDKQHDLGHMMR4	139625	262058	194392
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	IGDTDLAGMSSEQVAQVLR	IGDTDLAGMSSEQVAQVLR	3	IGDTDLAGMSSEQVAQVLR3	5563.5	2439.87	6343.63
P70615	P70615	LMNB1_RAT	Lmnb1	Lamin-B1	1	IGDTSVSYK	IGDTSVSYK	2	IGDTSVSYK2	23893.7	24055.9	24764.2
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	IGDTVSFSIEAK	IGDTVSFSIEAK	2	IGDTVSFSIEAK2	1.29107e+06	1.07398e+06	1.0722e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	IGDTWSK	IGDTWSK	1	IGDTWSK1	818041	935785	791714
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	IGDTWSK	IGDTWSK	2	IGDTWSK2	150625	183161	161469
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	IGDTWSKK	IGDTWSKK	2	IGDTWSKK2	26001.7	35939.9	42952.4
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	IGDTWSKKDNR	IGDTWSKKDNR	3	IGDTWSKKDNR3		10403.4	
F1M3G7	F1M3G7	AKP13_RAT	Akap13	A-kinase anchor protein 13	1	IGDVLVSQFSGENAER	IGDVLVSQFSGENAER	2	IGDVLVSQFSGENAER2	8838.03		5197.91
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	IGDVQGQELESQLPTK	IGDVQGQELESQLPTK	2	IGDVQGQELESQLPTK2	11178.3	8167.73	4225.13
Q5EB81	Q5EB81	NB5R1_RAT	Cyb5r1	NADH-cytochrome b5 reductase 1	1	IGDVVEFR	IGDVVEFR	2	IGDVVEFR2	19135.1	29259.3	21965.4
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	IGDVVGSSGANQQTSGK	IGDVVGSSGANQQTSGK	2	IGDVVGSSGANQQTSGK2	17022.2	12648	23205.1
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	IGDVVLSIDGISAQGMTHLEAQNK	IGDVVLSIDGISAQGMTHLEAQNK	3	IGDVVLSIDGISAQGMTHLEAQNK3	20444.3	17713.6	16698.1
A0A8J8YFS5	A0A8J8YFS5	A0A8J8YFS5_RAT	Hars1	Histidine--tRNA ligase, cytoplasmic	1	IGDYVQQHGGVSLVEQLLQDPK	IGDYVQQHGGVSLVEQLLQDPK	3	IGDYVQQHGGVSLVEQLLQDPK3		3245.21	2500.65
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	IGEAEAAVIEAMGK	IGEAEAAVIEAMGK	2	IGEAEAAVIEAMGK2	11884.7	9912.71	23190.4
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	IGEAEAAVIEAMGK	IGEAEAAVIEAMGK	3	IGEAEAAVIEAMGK3	16689.5	12662.8	8425.49
Q64617	Q64617	KPCL_RAT	Prkch	Protein kinase C eta type	1	IGEAVGLQPTR	IGEAVGLQPTR	2	IGEAVGLQPTR2		5985.61	
P18645	P18645	GALE_RAT	Gale	UDP-glucose 4-epimerase	1	IGEDPQGIPNNLMPYVSQVAIGR	IGEDPQGIPNNLMPYVSQVAIGR	3	IGEDPQGIPNNLMPYVSQVAIGR3	5090.01	26931.9	14772
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	IGEDYVK	IGEDYVK	2	IGEDYVK2	219112	172734	199275
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	IGEDYVKDLSQLTK	IGEDYVKDLSQLTK	3	IGEDYVKDLSQLTK3	6098.74	10397.4	
Q71UF4	Q71UF4	RBBP7_RAT	Rbbp7	Histone-binding protein RBBP7	1	IGEEQSAEDAEDGPPELLFIHGGHTAK	IGEEQSAEDAEDGPPELLFIHGGHTAK	3	IGEEQSAEDAEDGPPELLFIHGGHTAK3	6661.55		
Q71UF4	Q71UF4	RBBP7_RAT	Rbbp7	Histone-binding protein RBBP7	1	IGEEQSAEDAEDGPPELLFIHGGHTAK	IGEEQSAEDAEDGPPELLFIHGGHTAK	4	IGEEQSAEDAEDGPPELLFIHGGHTAK4	35973.9	7284.04	4716.32
B5DFB2	D4A250;B5DFB2	B5DFB2_RAT	Rbbp4	RB binding protein 4, chromatin remodeling factor	0	IGEEQSPEDAEDGPPELLFIHGGHTAK	IGEEQSPEDAEDGPPELLFIHGGHTAK	4	IGEEQSPEDAEDGPPELLFIHGGHTAK4	10304	5331.82	
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	IGEEYISDLDQLRK	IGEEYISDLDQLRK	2	IGEEYISDLDQLRK2	1611.22	3985.68	
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	IGEEYISDLDQLRK	IGEEYISDLDQLRK	3	IGEEYISDLDQLRK3	40752.1	35890.1	47294.9
P53534	P53534	PYGB_RAT	Pygb	Glycogen phosphorylase, brain form (Fragment)	1	IGEGFLTDLSQLK	IGEGFLTDLSQLK	2	IGEGFLTDLSQLK2	25232	25146.9	17171.3
P53534	P53534	PYGB_RAT	Pygb	Glycogen phosphorylase, brain form (Fragment)	1	IGEGFLTDLSQLKK	IGEGFLTDLSQLKK	3	IGEGFLTDLSQLKK3	16293.3	8052.62	10141.8
A0A0G2JYX9	A0A0G2JYX9	A0A0G2JYX9_RAT	Irak1	Interleukin-1 receptor-associated kinase 1	1	IGEGGFGCVYR	IGEGGFGC(UniMod:4)VYR	2	IGEGGFGC(UniMod:4)VYR2	4291.19	8070.78	9068.65
Q03114	Q03114	CDK5_RAT	Cdk5	Cyclin-dependent kinase 5	1	IGEGTYGTVFK	IGEGTYGTVFK	2	IGEGTYGTVFK2	10600.8	10694.2	11335.8
O89049	O89049	TRXR1_RAT	Txnrd1	Thioredoxin reductase 1, cytoplasmic	1	IGEHMEEHGIK	IGEHMEEHGIK	3	IGEHMEEHGIK3	8645.41		12182.3
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	IGEKWDR	IGEKWDR	2	IGEKWDR2	4951.5	3989.11	4928
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	IGELVGMLVSHCQGEGR	IGELVGMLVSHC(UniMod:4)QGEGR	2	IGELVGMLVSHC(UniMod:4)QGEGR2	3534.13	5869.39	3750.11
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	IGELVGMLVSHCQGEGR	IGELVGMLVSHC(UniMod:4)QGEGR	3	IGELVGMLVSHC(UniMod:4)QGEGR3	50588.8	51357.3	72148.7
Q63357	Q63357	MYO1D_RAT	Myo1d	Unconventional myosin-Id	1	IGELVGVLVNHFK	IGELVGVLVNHFK	3	IGELVGVLVNHFK3	1845.42		1877.47
P55146	P55146	TYRO3_RAT	Tyro3	Tyrosine-protein kinase receptor TYRO3	1	IGENPFNLPLQTLVR	IGENPFNLPLQTLVR	2	IGENPFNLPLQTLVR2	3510.04	5100.59	5731.35
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	IGESIELTCPR	IGESIELTC(UniMod:4)PR	2	IGESIELTC(UniMod:4)PR2	205819	189197	202187
A0A096MJT6	A0A096MJT6	A0A096MJT6_RAT	Bltp1	Similar to RIKEN cDNA D630029K19	1	IGETDELPEIR	IGETDELPEIR	2	IGETDELPEIR2	3225.93		
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	IGEWELIQESGVPLKPLFGPGYTGIR	IGEWELIQESGVPLKPLFGPGYTGIR	3	IGEWELIQESGVPLKPLFGPGYTGIR3	121721	223195	164403
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	IGEWELIQESGVPLKPLFGPGYTGIR	IGEWELIQESGVPLKPLFGPGYTGIR	4	IGEWELIQESGVPLKPLFGPGYTGIR4	10849.2	12270.2	10558.5
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	IGEYLEK	IGEYLEK	2	IGEYLEK2	196529	226523	208253
Q6AY49	Q6AY49	Q6AY49_RAT	Tusc3	Tumor suppressor candidate 3	1	IGFAAEQLAK	IGFAAEQLAK	2	IGFAAEQLAK2	8529.24	13944.9	10753.8
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	IGFAMLTNK	IGFAMLTNK	2	IGFAMLTNK2	1.94382e+07	2.00218e+07	1.96973e+07
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	IGFAMLTNKK	IGFAMLTNKK	2	IGFAMLTNKK2	354010	376723	297395
G3V9S9	G3V9S9	G3V9S9_RAT	Sec24d	SEC24 homolog D, COPII coat complex component	1	IGFDAIMR	IGFDAIMR	2	IGFDAIMR2	4768.42		6210.6
D3ZW15	D3ZW15;D3ZZA8	D3ZW15_RAT	Sec24b	SEC24 homolog B, COPII coat complex component	0	IGFEAVMR	IGFEAVMR	2	IGFEAVMR2	23918.5	23122.2	24226.4
P18163	O88813;P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	0	IGFFQGDIR	IGFFQGDIR	2	IGFFQGDIR2	107511	114180	118705
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	IGFGAFVDK	IGFGAFVDK	2	IGFGAFVDK2	121869	101211	117503
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	IGFGAFVDKPVSPYMFISPPQAIK	IGFGAFVDKPVSPYMFISPPQAIK	3	IGFGAFVDKPVSPYMFISPPQAIK3	1.84408e+06	1.81019e+06	2.1396e+06
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	IGFGAFVDKPVSPYMFISPPQAIK	IGFGAFVDKPVSPYMFISPPQAIK	4	IGFGAFVDKPVSPYMFISPPQAIK4	560703	435628	454741
B2RYB8	B2RYB8;G3V7M2	B2RYB8_RAT	Itgb2	Integrin beta	0	IGFGSFVDK	IGFGSFVDK	2	IGFGSFVDK2	349824	327261	317410
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	IGFGSFVEK	IGFGSFVEK	2	IGFGSFVEK2	1.21174e+06	1.19028e+06	1.31727e+06
A0A8I6A5X2	A0A8I6A5X2	A0A8I6A5X2_RAT	Usp32	ubiquitinyl hydrolase 1	1	IGFLSYEEALR	IGFLSYEEALR	2	IGFLSYEEALR2	7475.29	7767.74	10406.2
Q62840	Q62840	AMBN_RAT	Ambn	Ameloblastin	1	IGFMSSEEMPGER	IGFMSSEEMPGER	2	IGFMSSEEMPGER2	22687.8	23485.6	11770.9
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	IGFPSTSPAK	IGFPSTSPAK	2	IGFPSTSPAK2	310472	349864	328490
O35763	O35763;P31977;Q5PQK5;A0A8I5ZWW5	MOES_RAT	Msn	Moesin	0	IGFPWSEIR	IGFPWSEIR	2	IGFPWSEIR2	765098	690093	801317
Q6AYY8	Q6AYY8	ACATN_RAT	Slc33a1	Acetyl-coenzyme A transporter 1	1	IGFSAADAVTGLK	IGFSAADAVTGLK	2	IGFSAADAVTGLK2	4897.18	4909.9	3120.91
A0A8J8YRV3	A0A8J8YRV3	A0A8J8YRV3_RAT	Drg1	Developmentally regulated GTP binding protein 1	1	IGFVGFPSVGK	IGFVGFPSVGK	2	IGFVGFPSVGK2	26318.9	26534.3	27743.2
Q9JJH5	Q9JJH5	F262_RAT	Pfkfb2	6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2	1	IGGDSGLSLR	IGGDSGLSLR	2	IGGDSGLSLR2	7762.94	2460.35	4695.21
Q63635	Q63635	STX6_RAT	Stx6	Syntaxin-6	1	IGGELEEQAVMLDDFSHELESTQSR	IGGELEEQAVMLDDFSHELESTQSR	3	IGGELEEQAVMLDDFSHELESTQSR3	14542.8	12861.8	15062.6
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	IGGFTCLCMPGFK	IGGFTC(UniMod:4)LC(UniMod:4)MPGFK	2	IGGFTC(UniMod:4)LC(UniMod:4)MPGFK2	30939.1	50840.8	45158.3
F7ETC0	F7ETC0	F7ETC0_RAT	Smpd1	Sphingomyelin phosphodiesterase	1	IGGFYALTPR	IGGFYALTPR	2	IGGFYALTPR2	20792.5	8596.42	16730.5
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	IGGGGGEEEDSQQESETPDPSGGFR	IGGGGGEEEDSQQESETPDPSGGFR	3	IGGGGGEEEDSQQESETPDPSGGFR3	7942.3	8646.67	5689.06
D4AE24	D4AE24	D4AE24_RAT	Rps6kb2	Ribosomal protein S6 kinase	1	IGGGPGDAADVQR	IGGGPGDAADVQR	2	IGGGPGDAADVQR2	9509.18	10539.2	8660.63
P01946	P01946	HBA_RAT	Hba1	Hemoglobin subunit alpha-1/2	1	IGGHGGEYGEEALQR	IGGHGGEYGEEALQR	2	IGGHGGEYGEEALQR2	154702	126209	95061.4
P01946	P01946	HBA_RAT	Hba1	Hemoglobin subunit alpha-1/2	1	IGGHGGEYGEEALQR	IGGHGGEYGEEALQR	3	IGGHGGEYGEEALQR3	1.91174e+06	1.87613e+06	2.07499e+06
P11915	P11915	SCP2_RAT	Scp2	Sterol carrier protein 2	1	IGGIFAFK	IGGIFAFK	2	IGGIFAFK2	303122	255871	252888
P62630	P62632;P62630;F1M6C2;M0R757;A0A8I6AQI9	EF1A1_RAT	Eef1a1	Elongation factor 1-alpha 1	0	IGGIGTVPVGR	IGGIGTVPVGR	2	IGGIGTVPVGR2	267229	224732	236593
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	IGGILANELSVDEAALHAAVIAINEAIDHR	IGGILANELSVDEAALHAAVIAINEAIDHR	4	IGGILANELSVDEAALHAAVIAINEAIDHR4		2685.29	1447.89
B2RYJ2	B2RYJ2	B2RYJ2_RAT	Dbr1	Debranching RNA lariats 1	1	IGGISGIFK	IGGISGIFK	2	IGGISGIFK2	5517.74		
A0A8I6AD67	A0A8I6AD67	A0A8I6AD67_RAT	Parp9	Poly [ADP-ribose] polymerase	1	IGGSEIQEESK	IGGSEIQEESK	2	IGGSEIQEESK2	8044.73	9005.25	4672.61
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	IGGVADSSVR	IGGVADSSVR	2	IGGVADSSVR2	15387.1	10103.8	12468.5
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	IGGVADSSVRPK	IGGVADSSVRPK	2	IGGVADSSVRPK2	54322.1	49335.3	47424.8
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	IGGVADSSVRPK	IGGVADSSVRPK	3	IGGVADSSVRPK3	1.14262e+06	1.34555e+06	1.34004e+06
D3ZSC2	D3ZSC2	D3ZSC2_RAT	Pdcd2l	Programmed cell death 2-like	1	IGGVPDALPAVTAPGPR	IGGVPDALPAVTAPGPR	2	IGGVPDALPAVTAPGPR2	40252.9	52471	40814
D3ZSC2	D3ZSC2	D3ZSC2_RAT	Pdcd2l	Programmed cell death 2-like	1	IGGVPDALPAVTAPGPR	IGGVPDALPAVTAPGPR	3	IGGVPDALPAVTAPGPR3	5232.38	9225.56	5560.29
Q5XIH7	Q5XIH7	PHB2_RAT	Phb2	Prohibitin-2	1	IGGVQQDTILAEGLHFR	IGGVQQDTILAEGLHFR	2	IGGVQQDTILAEGLHFR2	3051.54	5085.22	5664.05
Q5XIH7	Q5XIH7	PHB2_RAT	Phb2	Prohibitin-2	1	IGGVQQDTILAEGLHFR	IGGVQQDTILAEGLHFR	3	IGGVQQDTILAEGLHFR3	142810	115345	135088
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	IGGYSCR	IGGYSC(UniMod:4)R	2	IGGYSC(UniMod:4)R2	81969.4	127892	123247
Q63716	Q63716;A0A0G2K3Z9	PRDX1_RAT	Prdx1	Peroxiredoxin-1	0	IGHPAPSFK	IGHPAPSFK	2	IGHPAPSFK2	95881.7	65066.4	58627.7
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	IGHPKPALLHSTFFPALQGAQTK	IGHPKPALLHSTFFPALQGAQTK	4	IGHPKPALLHSTFFPALQGAQTK4	10215.2	18883.4	17717.1
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	IGHTSMVK	IGHTSMVK	2	IGHTSMVK2		7597.88	9496.64
P54645	P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	1	IGHYILGDTLGVGTFGK	IGHYILGDTLGVGTFGK	2	IGHYILGDTLGVGTFGK2	2452.95	3356.03	884.654
P54645	P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	1	IGHYILGDTLGVGTFGK	IGHYILGDTLGVGTFGK	3	IGHYILGDTLGVGTFGK3	21970.9	30822.2	19712.2
Q09137	Q09137	AAPK2_RAT	Prkaa2	5'-AMP-activated protein kinase catalytic subunit alpha-2	1	IGHYVLGDTLGVGTFGK	IGHYVLGDTLGVGTFGK	2	IGHYVLGDTLGVGTFGK2	701.258	1641.71	
Q09137	Q09137	AAPK2_RAT	Prkaa2	5'-AMP-activated protein kinase catalytic subunit alpha-2	1	IGHYVLGDTLGVGTFGK	IGHYVLGDTLGVGTFGK	3	IGHYVLGDTLGVGTFGK3	28548.2	24558.4	25975.1
P15651	P15651	ACADS_RAT	Acads	Short-chain specific acyl-CoA dehydrogenase, mitochondrial	1	IGIASQALGIAQASLDCAVK	IGIASQALGIAQASLDC(UniMod:4)AVK	3	IGIASQALGIAQASLDC(UniMod:4)AVK3	14287.5	13161.3	11093.2
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	IGIEIIK	IGIEIIK	1	IGIEIIK1	11186	5780.59	5033.03
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	IGIEIIK	IGIEIIK	2	IGIEIIK2	1.02857e+06	953880	990720
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	IGIEIIKR	IGIEIIKR	2	IGIEIIKR2	32604.3	20318.8	26559.8
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	IGIELSGR	IGIELSGR	2	IGIELSGR2	4.04781e+06	5.08105e+06	4.78048e+06
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	IGIFGQDEDVTSK	IGIFGQDEDVTSK	2	IGIFGQDEDVTSK2	323158	303192	305595
A0A0U1RRV5	A0A0U1RRV5	A0A0U1RRV5_RAT	Cluh	Clustered mitochondria protein homolog	1	IGIGELITR	IGIGELITR	2	IGIGELITR2	3878.9	5550.88	4412.55
A0A0G2K583	A0A0G2K583	A0A0G2K583_RAT	Mtap	S-methyl-5'-thioadenosine phosphorylase	1	IGIIGGTGLDDPEILEGR	IGIIGGTGLDDPEILEGR	2	IGIIGGTGLDDPEILEGR2	8762.4	21449.9	8517.44
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	IGILHENFQTLK	IGILHENFQTLK	2	IGILHENFQTLK2		11847.7	8122.5
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	IGILHENFQTLK	IGILHENFQTLK	3	IGILHENFQTLK3	216857	264093	240697
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	IGILITDGK	IGILITDGK	2	IGILITDGK2	66415.7	79955.1	62273.7
P13086	P13086	SUCA_RAT	Suclg1	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial	1	IGIMPGHIHK	IGIMPGHIHK	2	IGIMPGHIHK2	13603.6	12434.2	13103.4
F1M086	F1M7K9;F1M086	F1M086_RAT	Elp4	Elongator complex protein 4	0	IGIQNLGSPLWGDDICCK	IGIQNLGSPLWGDDIC(UniMod:4)C(UniMod:4)K	3	IGIQNLGSPLWGDDIC(UniMod:4)C(UniMod:4)K3	4832.64	5817	6204.94
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	IGITAVSGGK	IGITAVSGGK	2	IGITAVSGGK2	26356.7	47853.8	63453.9
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	IGITMLVSVEILEEAGDSVSFQLQIR	IGITMLVSVEILEEAGDSVSFQLQIR	3	IGITMLVSVEILEEAGDSVSFQLQIR3	2683.7	1868.13	
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	IGITNHDEYSLVR	IGITNHDEYSLVR	2	IGITNHDEYSLVR2	48823.9	47225.6	38586
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	IGITNHDEYSLVR	IGITNHDEYSLVR	3	IGITNHDEYSLVR3	3.68152e+06	3.45043e+06	3.79594e+06
D4AAT7	D4AAT7	NNRD_RAT	Naxd	ATP-dependent (S)-NAD(P)H-hydrate dehydratase	1	IGIVGGCQEYTGAPYFAGISALK	IGIVGGC(UniMod:4)QEYTGAPYFAGISALK	3	IGIVGGC(UniMod:4)QEYTGAPYFAGISALK3		8906.07	2373.97
A0JPJ7	A0JPJ7	OLA1_RAT	Ola1	Obg-like ATPase 1	1	IGIVGLPNVGK	IGIVGLPNVGK	2	IGIVGLPNVGK2	46991.2	35179	45846.1
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	IGIVKPEEEFHVPLDSYR	IGIVKPEEEFHVPLDSYR	3	IGIVKPEEEFHVPLDSYR3	10739.8	8467.27	11968.5
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	IGIVKPEEEFHVPLDSYR	IGIVKPEEEFHVPLDSYR	4	IGIVKPEEEFHVPLDSYR4	58203.5	60340	66423.4
P27952	A0A0U1RVI9;D3ZT78;P27952;A0A8I5ZSA5;A0A8I6A3D4;D3ZQW7	RS2_RAT	Rps2	Small ribosomal subunit protein uS5	0	IGKPHTVPCK	IGKPHTVPC(UniMod:4)K	2	IGKPHTVPC(UniMod:4)K2			6853.57
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	IGLAEEIR	IGLAEEIR	2	IGLAEEIR2	21168.9	11520.2	28636.1
D4A131	D4A131	D4A131_RAT	Mrpl4	Mitochondrial ribosomal protein L4	1	IGLAELHPDVFATTPR	IGLAELHPDVFATTPR	3	IGLAELHPDVFATTPR3	5504.16	3512.51	
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	IGLAQYSGDPR	IGLAQYSGDPR	2	IGLAQYSGDPR2	41455.3	47580.6	36716.5
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	IGLDDEEK	IGLDDEEK	2	IGLDDEEK2	89915.6	81617.1	79728.8
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	IGLDFCK	IGLDFC(UniMod:4)K	2	IGLDFC(UniMod:4)K2	100702	86491.3	78447.5
A0A0G2K1A2	A0A0G2K1A2	A0A0G2K1A2_RAT	Mpo	Myeloperoxidase	1	IGLDLPALNMQR	IGLDLPALNMQR	2	IGLDLPALNMQR2	124240	67949.3	64728.5
F7EM42	F7EM42	F7EM42_RAT	Sash3	SAM and SH3 domain containing 3	1	IGLEEHTSTLLLNGYQTLEDFK	IGLEEHTSTLLLNGYQTLEDFK	3	IGLEEHTSTLLLNGYQTLEDFK3	7351.86		3475.73
F7EM42	F7EM42	F7EM42_RAT	Sash3	SAM and SH3 domain containing 3	1	IGLEEHTSTLLLNGYQTLEDFKELR	IGLEEHTSTLLLNGYQTLEDFKELR	4	IGLEEHTSTLLLNGYQTLEDFKELR4		4545.19	5089.51
Q9QYV0	Q9QYV0	ADA15_RAT	Adam15	Disintegrin and metalloproteinase domain-containing protein 15	1	IGLELDGENHILELQQNR	IGLELDGENHILELQQNR	3	IGLELDGENHILELQQNR3	2832.34	1648.66	
A0A8I6AAD8	A0A8I6AAD8	A0A8I6AAD8_RAT	Snx4	Sorting nexin 4	1	IGLENFLLR	IGLENFLLR	2	IGLENFLLR2	20417.4	18555.4	19737.9
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	IGLETSLR	IGLETSLR	2	IGLETSLR2	106218	106601	98142.2
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	IGLFGGAGVGK	IGLFGGAGVGK	1	IGLFGGAGVGK1	4520.95	4439.93	3825.11
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	IGLFGGAGVGK	IGLFGGAGVGK	2	IGLFGGAGVGK2	1.01744e+06	961456	1.17141e+06
A2RRU1	A2RRU1	GYS1_RAT	Gys1	Glycogen [starch] synthase, muscle	1	IGLFNSSADR	IGLFNSSADR	2	IGLFNSSADR2	13635.9	12495.6	26072.5
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	IGLFYMDNDLITR	IGLFYMDNDLITR	2	IGLFYMDNDLITR2	55239.1	61929.8	71115.4
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	IGLGTSESSPLLPSQVPFETR	IGLGTSESSPLLPSQVPFETR	3	IGLGTSESSPLLPSQVPFETR3	25856.6	22906.6	25871.3
Q8CG09	A0A0G2K5H6;Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	0	IGLHNLR	IGLHNLR	2	IGLHNLR2	11631	5584.85	
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	IGLHSGSVFAGVVGVK	IGLHSGSVFAGVVGVK	2	IGLHSGSVFAGVVGVK2	7644.87	5643.62	4225.49
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	IGLHSGSVFAGVVGVK	IGLHSGSVFAGVVGVK	3	IGLHSGSVFAGVVGVK3	143261	155643	117866
B2RZ78	B2RZ78	VPS29_RAT	Vps29	Vacuolar protein sorting-associated protein 29	1	IGLIHGHQVIPWGDMASLALLQR	IGLIHGHQVIPWGDMASLALLQR	3	IGLIHGHQVIPWGDMASLALLQR3	6203.24	7840.52	3807.94
B2RZ78	B2RZ78	VPS29_RAT	Vps29	Vacuolar protein sorting-associated protein 29	1	IGLIHGHQVIPWGDMASLALLQR	IGLIHGHQVIPWGDMASLALLQR	4	IGLIHGHQVIPWGDMASLALLQR4	62113.4	37178	40363.4
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	IGLINDMVR	IGLINDMVR	2	IGLINDMVR2	170933	202952	194472
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	IGLIQFCLSAPK	IGLIQFC(UniMod:4)LSAPK	2	IGLIQFC(UniMod:4)LSAPK2	135388	130669	136522
A0A0G2JZP9	A0A8I6AJA6;A0A0G2JZP9	A0A0G2JZP9_RAT	Rnf11	Ring finger protein 11-like 1	0	IGLIQHLPK	IGLIQHLPK	2	IGLIQHLPK2	27808.4	13006.7	7355.5
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	IGLLGHPPHMNVNPQQPA	IGLLGHPPHMNVNPQQPA	3	IGLLGHPPHMNVNPQQPA3	47975	41915.3	33002.9
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	IGLMSLSK	IGLMSLSK	2	IGLMSLSK2	306723	315261	311635
Q04400	Q04400	ADCY5_RAT	Adcy5	Adenylate cyclase type 5	1	IGLNIGPVVAGVIGAR	IGLNIGPVVAGVIGAR	2	IGLNIGPVVAGVIGAR2	28700.3		39253.6
A0A0G2JUG7	A0A8I6GKX8;A0A0G2JUG7	IQEC1_RAT	Iqsec1	IQ motif and SEC7 domain-containing protein 1	0	IGLNLFNK	IGLNLFNK	2	IGLNLFNK2	4917.05	12600.8	13547
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	IGLNMGPVVAGVIGAR	IGLNMGPVVAGVIGAR	2	IGLNMGPVVAGVIGAR2	51096.4	60232	54313.1
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	IGLNMGPVVAGVIGAR	IGLNMGPVVAGVIGAR	3	IGLNMGPVVAGVIGAR3	15489.3	18554.7	16894.2
P01026	P01026	CO3_RAT	C3	Complement C3	1	IGLQEVEVK	IGLQEVEVK	2	IGLQEVEVK2	3.35652e+06	3.28599e+06	2.91556e+06
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	IGLQSTR	IGLQSTR	2	IGLQSTR2	24657.2	29048.8	21923.2
O35824	O35824	DNJA2_RAT	Dnaja2	DnaJ homolog subfamily A member 2	1	IGLVEALCGFQFTFK	IGLVEALC(UniMod:4)GFQFTFK	2	IGLVEALC(UniMod:4)GFQFTFK2	19376.4	12979.8	11776
O35824	O35824	DNJA2_RAT	Dnaja2	DnaJ homolog subfamily A member 2	1	IGLVEALCGFQFTFK	IGLVEALC(UniMod:4)GFQFTFK	3	IGLVEALC(UniMod:4)GFQFTFK3	4569.52		3696.73
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	IGLVRPGTALELLEAQAATGFIVDPVSNLR	IGLVRPGTALELLEAQAATGFIVDPVSNLR	4	IGLVRPGTALELLEAQAATGFIVDPVSNLR4	7636.9		2706.74
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	IGMDGSGR	IGMDGSGR	2	IGMDGSGR2	225613	357425	378601
G3V6G7	G3V6G7	G3V6G7_RAT	Pnpt1	polyribonucleotide nucleotidyltransferase	1	IGMIDGECVVNPTR	IGMIDGEC(UniMod:4)VVNPTR	2	IGMIDGEC(UniMod:4)VVNPTR2	3091.83	3059.4	3850.85
A0A0G2JTM9	A0A0G2JTM9	A0A0G2JTM9_RAT	Dnajb14	DnaJ heat shock protein family (Hsp40) member B14	1	IGNAYAVLSNPEK	IGNAYAVLSNPEK	2	IGNAYAVLSNPEK2	3094.43	4260.59	3375.68
Q6MG61	Q6MG61	CLIC1_RAT	Clic1	Chloride intracellular channel protein 1	1	IGNCPFSQR	IGNC(UniMod:4)PFSQR	2	IGNC(UniMod:4)PFSQR2	108411	92198.3	110573
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	IGNFLNYGSHTGDADGFK	IGNFLNYGSHTGDADGFK	2	IGNFLNYGSHTGDADGFK2	15896.4	8553.68	16181.5
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	IGNGVPSSPLILER	IGNGVPSSPLILER	2	IGNGVPSSPLILER2	6402.24	9289.26	7166.47
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	IGNILDLCTALSALSGVPADK	IGNILDLC(UniMod:4)TALSALSGVPADK	3	IGNILDLC(UniMod:4)TALSALSGVPADK3	12931.7	12988.6	10463.9
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	IGNLQTDLSDGLR	IGNLQTDLSDGLR	2	IGNLQTDLSDGLR2	26193.8	20911.6	24614.4
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	IGNSAFAR	IGNSAFAR	2	IGNSAFAR2	17811.6	14619.4	13656.2
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	IGNSYFK	IGNSYFK	2	IGNSYFK2	44973.5	35159.5	38888.7
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	IGNSYFKEER	IGNSYFKEER	3	IGNSYFKEER3	36540.6	46062.7	37978.8
Q5XI55	Q5XI55	NGLY1_RAT	Ngly1	Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase	1	IGNTAFSTR	IGNTAFSTR	2	IGNTAFSTR2	5013.42	2104.03	5019.39
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	IGNTEDGALPK	IGNTEDGALPK	2	IGNTEDGALPK2	253388	252837	257708
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	IGNTEDGALPKEDEPSVGQVAR	IGNTEDGALPKEDEPSVGQVAR	3	IGNTEDGALPKEDEPSVGQVAR3	129055	162530	148695
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	IGNTGGMLDNILASK	IGNTGGMLDNILASK	2	IGNTGGMLDNILASK2	12044.7	11424.1	18162.6
Q7TP01	Q7TP01	Q7TP01_RAT	Saal1	Bq135360	1	IGNTVYSK	IGNTVYSK	2	IGNTVYSK2	11379.2	11736.2	
A0A8I5ZNY0	A0A8I5ZNY0	A0A8I5ZNY0_RAT	Avl9	AVL9 cell migration associated	1	IGNVMVTTSR	IGNVMVTTSR	2	IGNVMVTTSR2	6964.42	5003.72	3977.66
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	IGPAPAFAGDTISLTITK	IGPAPAFAGDTISLTITK	2	IGPAPAFAGDTISLTITK2	238195	262648	194784
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	IGPAPAFAGDTISLTITK	IGPAPAFAGDTISLTITK	3	IGPAPAFAGDTISLTITK3	51573.6	73499.8	78156.8
P27139	P27139	CAH2_RAT	Ca2	Carbonic anhydrase 2	1	IGPASQGLQK	IGPASQGLQK	2	IGPASQGLQK2	91563.8	85096.9	79874
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	IGPDCEETLPDLPSPDADHR	IGPDC(UniMod:4)EETLPDLPSPDADHR	3	IGPDC(UniMod:4)EETLPDLPSPDADHR3	19427	15169.2	15838.7
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	IGPECVDIDECR	IGPEC(UniMod:4)VDIDEC(UniMod:4)R	2	IGPEC(UniMod:4)VDIDEC(UniMod:4)R2	336636	350468	297778
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	IGPECVDIDECRYR	IGPEC(UniMod:4)VDIDEC(UniMod:4)RYR	3	IGPEC(UniMod:4)VDIDEC(UniMod:4)RYR3	4809.51	8052.45	
M0RE02	M0RE02	M0RE02_RAT	ENSRNOG00000069071	Ig-like domain-containing protein	1	IGPGSGDTNYNEK	IGPGSGDTNYNEK	2	IGPGSGDTNYNEK2	105714	68529.5	84414.1
D4AE24	D4AE24	D4AE24_RAT	Rps6kb2	Ribosomal protein S6 kinase	1	IGPHCFELLSVLGK	IGPHC(UniMod:4)FELLSVLGK	3	IGPHC(UniMod:4)FELLSVLGK3	18005.8	26892.8	24186.1
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	IGPILDNSTLQSEVKPILEK	IGPILDNSTLQSEVKPILEK	3	IGPILDNSTLQSEVKPILEK3	593951	428400	577368
Q4QQT4	Q4QQT4	2AAB_RAT	Ppp2r1b	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	1	IGPILDTNALQGEVKPVLQK	IGPILDTNALQGEVKPVLQK	3	IGPILDTNALQGEVKPVLQK3	15460.5	20382.3	14441.8
Q9ESC1	Q9ESC1	AGRL4_RAT	Adgrl4	Adhesion G protein-coupled receptor L4	1	IGPITEQLTLLHEIYK	IGPITEQLTLLHEIYK	3	IGPITEQLTLLHEIYK3	30944.5	27962.7	30574.2
P23358	M0R4B6;P23358;A0A8I6A1H0;D3ZJE2;A0A8I5YBG2	RL12_RAT	Rpl12	Large ribosomal subunit protein uL11	0	IGPLGLSPK	IGPLGLSPK	2	IGPLGLSPK2	104562	91713.4	79520.8
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	IGPLQSTLEVGLESPPLSVSEER	IGPLQSTLEVGLESPPLSVSEER	3	IGPLQSTLEVGLESPPLSVSEER3		32814.8	28805.6
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	IGPNIQLAECYGLR	IGPNIQLAEC(UniMod:4)YGLR	2	IGPNIQLAEC(UniMod:4)YGLR2	28767.7	18267.7	20587.5
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	IGPTELLIEMEDWK	IGPTELLIEMEDWK	2	IGPTELLIEMEDWK2	7.38147e+06	18292.2	6.20746e+06
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	IGPTELLIEMEDWK	IGPTELLIEMEDWK	3	IGPTELLIEMEDWK3	22114.4	20834.7	14753.9
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	IGPTELLIEMEDWK	IGPTELLIEMEDWK	4	IGPTELLIEMEDWK4	203812	174352	174964
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	IGPTELLIEMEDWKGDK	IGPTELLIEMEDWKGDK	3	IGPTELLIEMEDWKGDK3	6.12809e+06	5.76769e+06	5.43108e+06
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	IGPTELLIEMEDWKGDK	IGPTELLIEMEDWKGDK	4	IGPTELLIEMEDWKGDK4	3433.5	5126.71	511.497
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	IGPTELLIEMEDWKGDKVK	IGPTELLIEMEDWKGDKVK	3	IGPTELLIEMEDWKGDKVK3	18836.1	23978.7	21500.2
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	IGPTELLIEMEDWKGDKVK	IGPTELLIEMEDWKGDKVK	4	IGPTELLIEMEDWKGDKVK4	288799	242584	276776
D3ZSB7	D3ZSB7	D3ZSB7_RAT	Rps6ka4	Ribosomal protein S6 kinase	1	IGPVAQDLLQR	IGPVAQDLLQR	2	IGPVAQDLLQR2	4871.88	9083.25	5721.69
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	IGPVTYSLDGCVR	IGPVTYSLDGC(UniMod:4)VR	2	IGPVTYSLDGC(UniMod:4)VR2	11705.2	15255.9	17827.2
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	IGQESLEFILVQADTPSSPSIDR	IGQESLEFILVQADTPSSPSIDR	3	IGQESLEFILVQADTPSSPSIDR3	379802	367787	366875
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	IGQESLEFILVQADTPSSPSIDR	IGQESLEFILVQADTPSSPSIDR	4	IGQESLEFILVQADTPSSPSIDR4		6719.54	
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	IGQETDK	IGQETDK	2	IGQETDK2			163330
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	IGQETDKTTTR	IGQETDKTTTR	2	IGQETDKTTTR2			4057.27
P12007	P12007	IVD_RAT	Ivd	Isovaleryl-CoA dehydrogenase, mitochondrial	1	IGQFQLMQGK	IGQFQLMQGK	2	IGQFQLMQGK2	22510.8		20784.5
B2RYJ4	B2RYJ4	ADPPT_RAT	Aasdhppt	L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	1	IGQFVFAR	IGQFVFAR	2	IGQFVFAR2	57740.8	55734.8	
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	IGQGHCVSGMGMGR	IGQGHC(UniMod:4)VSGMGMGR	2	IGQGHC(UniMod:4)VSGMGMGR2	3086.05	1510.97	1863.54
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	IGQGHCVSGMGMGR	IGQGHC(UniMod:4)VSGMGMGR	3	IGQGHC(UniMod:4)VSGMGMGR3	86367	86816.9	82238
Q9JLT0	Q9JLT0	MYH10_RAT	Myh10	Myosin-10	1	IGQLEEQLEQEAK	IGQLEEQLEQEAK	2	IGQLEEQLEQEAK2	2210.43	4486.18	
F1LXF5	F1LXF5	F1LXF5_RAT	Get4	Guided entry of tail-anchored proteins factor 4	1	IGQLFFGVPPK	IGQLFFGVPPK	2	IGQLFFGVPPK2	39058.5	49256.2	39898.8
Q63210	Q63210	GNA12_RAT	Gna12	Guanine nucleotide-binding protein subunit alpha-12	1	IGQLNYFPSK	IGQLNYFPSK	2	IGQLNYFPSK2	4370.34	5592.04	
A0A8I6A182	A0A8I6A182	A0A8I6A182_RAT	Pitpnc1	Phosphatidylinositol transfer protein, cytoplasmic 1	1	IGQLYMISK	IGQLYMISK	2	IGQLYMISK2	36308.8	45916.8	44353
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	IGQSLSSLICPAEQGIMSEK	IGQSLSSLIC(UniMod:4)PAEQGIMSEK	3	IGQSLSSLIC(UniMod:4)PAEQGIMSEK3	30731.3	38993.7	25566.3
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	IGRNECVVVIR	IGRNEC(UniMod:4)VVVIR	3	IGRNEC(UniMod:4)VVVIR3	6562.99	11040.7	6496.11
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	IGRPSETGIIGIIDPECR	IGRPSETGIIGIIDPEC(UniMod:4)R	3	IGRPSETGIIGIIDPEC(UniMod:4)R3	79403.9	66809.5	72387.5
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	IGSAELSFEHAAWMSK	IGSAELSFEHAAWMSK	3	IGSAELSFEHAAWMSK3	18057.2	11362.8	22524.6
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	IGSCTQQDVELHVQK	IGSC(UniMod:4)TQQDVELHVQK	2	IGSC(UniMod:4)TQQDVELHVQK2	1626.11	2417.54	1000.76
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	IGSCTQQDVELHVQK	IGSC(UniMod:4)TQQDVELHVQK	3	IGSC(UniMod:4)TQQDVELHVQK3	20631.1	19564.2	11885.5
P26431	P26431	SL9A1_RAT	Slc9a1	Sodium/hydrogen exchanger 1	1	IGSDPLAYEPK	IGSDPLAYEPK	2	IGSDPLAYEPK2	170760	176987	170498
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	IGSEVQVLGR	IGSEVQVLGR	2	IGSEVQVLGR2	2384.32	5577.67	3855.28
O55173	O55173	PDPK1_RAT	Pdpk1	3-phosphoinositide-dependent protein kinase 1	1	IGSFDETCTR	IGSFDETC(UniMod:4)TR	2	IGSFDETC(UniMod:4)TR2	4459.3	4362.9	11706.3
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	IGSFGPQEDLLFLR	IGSFGPQEDLLFLR	2	IGSFGPQEDLLFLR2	7911.38	6584.24	7243.82
P59622	P59622	SLAP1_RAT	Sla	Src-like-adapter	1	IGSFMIR	IGSFMIR	2	IGSFMIR2	8753.09	14701.1	11445.9
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	IGSFVGMVSAHSQSSVMYEVK	IGSFVGMVSAHSQSSVMYEVK	3	IGSFVGMVSAHSQSSVMYEVK3	13284.7	13781.5	17345.3
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	IGSGDVLTFYDGDDLTAR	IGSGDVLTFYDGDDLTAR	2	IGSGDVLTFYDGDDLTAR2	33904.3	28226.4	34549
Q9Z2F5	Q9Z2F5	CTBP1_RAT	Ctbp1	C-terminal-binding protein 1	1	IGSGFDNIDIK	IGSGFDNIDIK	2	IGSGFDNIDIK2	15762.9	10961.7	14184.5
P17945	P17945	HGF_RAT	Hgf	Hepatocyte growth factor	1	IGSGPCEGDYGGPLICEQHK	IGSGPC(UniMod:4)EGDYGGPLIC(UniMod:4)EQHK	3	IGSGPC(UniMod:4)EGDYGGPLIC(UniMod:4)EQHK3	5886.77		
A0A8I6ATH0	A0A8I6ATH0;P11345	A0A8I6ATH0_RAT	Braf	non-specific serine/threonine protein kinase	0	IGSGSFGTVYK	IGSGSFGTVYK	2	IGSGSFGTVYK2	23198.2	36138.6	20901.9
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	IGSGYSGTVR	IGSGYSGTVR	2	IGSGYSGTVR2	35236.5	24131.7	35916.6
A0A096MJF9	A0A096MJF9	A0A096MJF9_RAT	Tmem132e	Transmembrane protein 132E	1	IGSISLFRPPPR	IGSISLFRPPPR	3	IGSISLFRPPPR3	83245.4	53938.7	53870.4
Q4V7C1	Q4V7C1	CEP43_RAT	Cep43	Centrosomal protein 43	1	IGSLGLGSGEDEDYVDDFNSASHR	IGSLGLGSGEDEDYVDDFNSASHR	3	IGSLGLGSGEDEDYVDDFNSASHR3	7278.56	8403	12660.7
Q27W02	Q27W02;F1M0X6	MGN_RAT	Magoh	Protein mago nashi homolog	0	IGSLIDVNQSK	IGSLIDVNQSK	2	IGSLIDVNQSK2	5508.81		
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	IGSMSSVTSTK	IGSMSSVTSTK	2	IGSMSSVTSTK2	24968.1	28790.7	21463.2
P56225	P56225	PO5F2_RAT	Pou5f2	POU domain, class 5, transcription factor 2	1	IGSNLEK	IGSNLEK	2	IGSNLEK2	86539.1	85761.2	79704.6
B0BMT9	B0BMT9	B0BMT9_RAT	Sqor	Sulfide quinone oxidoreductase	1	IGSNYSVK	IGSNYSVK	1	IGSNYSVK1	118695	154431	137667
A0A8I5ZS69	A0A8I5ZS69	A0A8I5ZS69_RAT	Snx6	Sorting nexin	1	IGSSLYALGTQDSTDICK	IGSSLYALGTQDSTDIC(UniMod:4)K	2	IGSSLYALGTQDSTDIC(UniMod:4)K2	43409.7	53865.1	43276.4
A0A8I5ZS69	A0A8I5ZS69	A0A8I5ZS69_RAT	Snx6	Sorting nexin	1	IGSSLYALGTQDSTDICK	IGSSLYALGTQDSTDIC(UniMod:4)K	3	IGSSLYALGTQDSTDIC(UniMod:4)K3	3672.31		5700.06
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	IGSTIDDTISK	IGSTIDDTISK	2	IGSTIDDTISK2	218557	240627	194887
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	IGSTSSSADTANK	IGSTSSSADTANK	2	IGSTSSSADTANK2			11752.7
A0A8I5Y8H6	A0A8I5Y8H6	A0A8I5Y8H6_RAT	Psd3	Pleckstrin and Sec7 domain containing 3	1	IGSTTNPFLDIPHDPNAAVYK	IGSTTNPFLDIPHDPNAAVYK	3	IGSTTNPFLDIPHDPNAAVYK3	9147.97	7314.02	
A0A8I6GAD6	A0A8I6GAD6	A0A8I6GAD6_RAT	Nrbp1	Nuclear receptor binding protein 1	1	IGSVAPDTINNHVK	IGSVAPDTINNHVK	2	IGSVAPDTINNHVK2	30099.4	27989.2	20672.5
A0A8I6GAD6	A0A8I6GAD6	A0A8I6GAD6_RAT	Nrbp1	Nuclear receptor binding protein 1	1	IGSVAPDTINNHVK	IGSVAPDTINNHVK	3	IGSVAPDTINNHVK3	225113	259695	217786
A0A0G2K3D9	A0A0G2K3D9	A0A0G2K3D9_RAT	Tmem132b	Transmembrane protein 132B	1	IGSVVVYPTQDDLR	IGSVVVYPTQDDLR	2	IGSVVVYPTQDDLR2	16901.3	10102.6	4359.99
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	IGSYDLTPGNPENFHGCDFAQHIQR	IGSYDLTPGNPENFHGC(UniMod:4)DFAQHIQR	3	IGSYDLTPGNPENFHGC(UniMod:4)DFAQHIQR3	12439.1	16489.8	13390
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	IGSYDLTPGNPENFHGCDFAQHIQR	IGSYDLTPGNPENFHGC(UniMod:4)DFAQHIQR	4	IGSYDLTPGNPENFHGC(UniMod:4)DFAQHIQR4	64590.9	78005.5	69416.4
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	IGSYLSASTR	IGSYLSASTR	2	IGSYLSASTR2	36178.8	47752.2	28599
Q6AYE2	Q6AYE2	SHLB1_RAT	Sh3glb1	Endophilin-B1	1	IGTADRELIQTSALNFLTPLR	IGTADRELIQTSALNFLTPLR	3	IGTADRELIQTSALNFLTPLR3	5403.68	5364.29	5666.94
P14056	P14056	ARAF_RAT	Araf	Serine/threonine-protein kinase A-Raf	1	IGTGSFGTVFR	IGTGSFGTVFR	2	IGTGSFGTVFR2	20385.9	22452.9	14906.1
Q641W2	Q641W2	MYG1_RAT	Myg1	MYG1 exonuclease	1	IGTHNGTFHCDEALACALLR	IGTHNGTFHC(UniMod:4)DEALAC(UniMod:4)ALLR	4	IGTHNGTFHC(UniMod:4)DEALAC(UniMod:4)ALLR4	15434.2		
A0A8I5ZVU1	A0A8I5ZVU1	A0A8I5ZVU1_RAT	Uckl1	Uridine-cytidine kinase	1	IGTILIQTNQLTGEPELHYLR	IGTILIQTNQLTGEPELHYLR	3	IGTILIQTNQLTGEPELHYLR3	3932.45	4689.15	7708.5
Q64270	Q64270	EI2BA_RAT	Eif2b1	Translation initiation factor eIF-2B subunit alpha	1	IGTNQMAVCAK	IGTNQMAVC(UniMod:4)AK	2	IGTNQMAVC(UniMod:4)AK2	12915.2	12470.4	11451
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	IGTTSFSQR	IGTTSFSQR	2	IGTTSFSQR2	7457.88	5972.98	6329.87
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	IGTVANDDLER	IGTVANDDLER	2	IGTVANDDLER2	14307.3	21675.5	25445.2
D3ZHQ1	D3ZHQ1	D3ZHQ1_RAT	Dpp8	Dipeptidylpeptidase 8	1	IGTVGIAAYDYHPGSGTFLFQAGSGIYHIK	IGTVGIAAYDYHPGSGTFLFQAGSGIYHIK	4	IGTVGIAAYDYHPGSGTFLFQAGSGIYHIK4	2637.82	5344.96	4354.93
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	IGTVSAPVHNAHEK	IGTVSAPVHNAHEK	3	IGTVSAPVHNAHEK3	9275.43		9848.05
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	IGTVSPLFQK	IGTVSPLFQK	2	IGTVSPLFQK2	44589.3	32711.3	38043
Q5HZE4	Q5HZE4	MTNA_RAT	Mri1	Methylthioribose-1-phosphate isomerase	1	IGTYQLAIVAK	IGTYQLAIVAK	2	IGTYQLAIVAK2	1666.46	5368.04	4095.22
Q4FZT8	Q4FZT8	SPRY4_RAT	Spryd4	SPRY domain-containing protein 4	1	IGVADVDMSR	IGVADVDMSR	2	IGVADVDMSR2	4290.61	10163.8	5767.31
P25093	P25093	FAAA_RAT	Fah	Fumarylacetoacetase	1	IGVAIGDQILDLSVIK	IGVAIGDQILDLSVIK	2	IGVAIGDQILDLSVIK2	8915.98		11409.5
D3ZL10	D3ZL10	D3ZL10_RAT	Col6a6	Collagen type VI alpha 6 chain	1	IGVAQFSDSYR	IGVAQFSDSYR	2	IGVAQFSDSYR2	5173.7	3635.4	9661.52
Q9Z2P6	Q9Z2P6	SNP29_RAT	Snap29	Synaptosomal-associated protein 29	1	IGVASSEELVR	IGVASSEELVR	2	IGVASSEELVR2	106710	111164	118583
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	IGVCPSAYK	IGVC(UniMod:4)PSAYK	2	IGVC(UniMod:4)PSAYK2	494022	501697	441082
A0A8I5YBR2	A0A8I5YBR2	A0A8I5YBR2_RAT	Cops6	COP9 signalosome complex subunit 6	1	IGVDHVAR	IGVDHVAR	2	IGVDHVAR2	20844.6	21785.6	19160.1
D4AC36	D4AC36	D4AC36_RAT	Eif3f	Eukaryotic translation initiation factor 3 subunit F	1	IGVDLIMK	IGVDLIMK	2	IGVDLIMK2	163087	140585	115212
P63144	P63144	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	1	IGVGAMTWSPLACGIISGK	IGVGAMTWSPLAC(UniMod:4)GIISGK	2	IGVGAMTWSPLAC(UniMod:4)GIISGK2	61745.4	36175.2	49854.2
P62483	P62483	KCAB2_RAT	Kcnab2	Voltage-gated potassium channel subunit beta-2	1	IGVGAMTWSPLACGIVSGK	IGVGAMTWSPLAC(UniMod:4)GIVSGK	2	IGVGAMTWSPLAC(UniMod:4)GIVSGK2	6936.53	14295.6	8692.62
P62483	P62483	KCAB2_RAT	Kcnab2	Voltage-gated potassium channel subunit beta-2	1	IGVGAMTWSPLACGIVSGK	IGVGAMTWSPLAC(UniMod:4)GIVSGK	3	IGVGAMTWSPLAC(UniMod:4)GIVSGK3	9546.62	8916.79	12483.2
P62703	P62703	RS4X_RAT	Rps4x	Small ribosomal subunit protein eS4	1	IGVITNR	IGVITNR	2	IGVITNR2	54610.3	73632.7	55588.1
P29314	P29314	RS9_RAT	Rps9	Small ribosomal subunit protein uS4	1	IGVLDEGK	IGVLDEGK	2	IGVLDEGK2	119420	117426	97393.4
P21643	P21643	T23O_RAT	Tdo2	Tryptophan 2,3-dioxygenase	1	IGVLQSLR	IGVLQSLR	2	IGVLQSLR2	6866.83	11114.7	8302.56
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	IGVNQPK	IGVNQPK	1	IGVNQPK1	4522.66	4528.7	
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	IGVQLTDSPYVVASMR	IGVQLTDSPYVVASMR	2	IGVQLTDSPYVVASMR2	33445.4	37298.8	36157.1
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	IGVQLTDSPYVVASMR	IGVQLTDSPYVVASMR	3	IGVQLTDSPYVVASMR3	17120.5	12446	10924.4
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	IGVQMGHPGSSNAHPVTWSPGGIISR	IGVQMGHPGSSNAHPVTWSPGGIISR	3	IGVQMGHPGSSNAHPVTWSPGGIISR3	12374.7	4516.46	6368.08
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	IGVQMGHPGSSNAHPVTWSPGGIISR	IGVQMGHPGSSNAHPVTWSPGGIISR	4	IGVQMGHPGSSNAHPVTWSPGGIISR4	12728.4	16537.1	9216.63
Q6AY61	Q6AY61	PRS23_RAT	Prss23	Serine protease 23	1	IGVSPPAK	IGVSPPAK	2	IGVSPPAK2	25168.1	18645.7	
P47727	P47727	CBR1_RAT	Cbr1	Carbonyl reductase [NADPH] 1	1	IGVTVLSR	IGVTVLSR	2	IGVTVLSR2	27457.9	21547.5	30632.3
F7F1X7	F7F1X7	F7F1X7_RAT	Pmm2	Phosphomannomutase	1	IGVVGGSDFEK	IGVVGGSDFEK	2	IGVVGGSDFEK2	16370.2	18824.1	14820.7
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	IGWRNDASHLLVFTTDAK	IGWRNDASHLLVFTTDAK	4	IGWRNDASHLLVFTTDAK4	9405.59	10172.5	8782.36
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	IGYECLCPSGFR	IGYEC(UniMod:4)LC(UniMod:4)PSGFR	2	IGYEC(UniMod:4)LC(UniMod:4)PSGFR2	93982.7	95062.7	101124
Q66H39	Q66H39	ABCF3_RAT	Abcf3	ATP-binding cassette sub-family F member 3	1	IGYFSQHHVEQLDLNVSAVELLAR	IGYFSQHHVEQLDLNVSAVELLAR	4	IGYFSQHHVEQLDLNVSAVELLAR4	3239.16		
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	IGYLGAMLLLDER	IGYLGAMLLLDER	2	IGYLGAMLLLDER2	41467.1	39751.8	20179.1
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	IGYLNDR	IGYLNDR	2	IGYLNDR2	42279.2	25768	44821.6
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	IGYLNDRVDELLEK	IGYLNDRVDELLEK	2	IGYLNDRVDELLEK2	3715.75	2053.21	1582.39
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	IGYLNDRVDELLEK	IGYLNDRVDELLEK	3	IGYLNDRVDELLEK3	198890	219103	246692
Q5I0C3	Q5I0C3	MCCA_RAT	Mccc1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	1	IGYPVMIK	IGYPVMIK	2	IGYPVMIK2	45648	42663	50164.2
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	IGYQHLQEVLQSHGPPTHR	IGYQHLQEVLQSHGPPTHR	3	IGYQHLQEVLQSHGPPTHR3	8987.85	5759.23	3718.59
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	IGYQHLQEVLQSHGPPTHR	IGYQHLQEVLQSHGPPTHR	4	IGYQHLQEVLQSHGPPTHR4	58233.4	64496.5	35298.1
O35547	O35547	ACSL4_RAT	Acsl4	Long-chain-fatty-acid--CoA ligase 4	1	IGYSSPLTLSDQSSK	IGYSSPLTLSDQSSK	2	IGYSSPLTLSDQSSK2	6680.81	7800.79	8455.56
M0RD40	M0RD40	M0RD40_RAT	Sik3	non-specific serine/threonine protein kinase	1	IGYYEIDR	IGYYEIDR	2	IGYYEIDR2	20901.5	24594.1	18001.1
Q66H91	Q66H91	GIT2_RAT	Git2	ARF GTPase-activating protein GIT2	1	IHAAVTEMAALFPK	IHAAVTEMAALFPK	3	IHAAVTEMAALFPK3	705.343	4592.5	2492.09
B3GNI6	A0A8I6AA08;B3GNI6	SEP11_RAT	Septin11	Septin-11	0	IHACLYFIAPTGHSLK	IHAC(UniMod:4)LYFIAPTGHSLK	3	IHAC(UniMod:4)LYFIAPTGHSLK3	16333.1		10512.7
B3GNI6	A0A8I6AA08;B3GNI6	SEP11_RAT	Septin11	Septin-11	0	IHACLYFIAPTGHSLK	IHAC(UniMod:4)LYFIAPTGHSLK	4	IHAC(UniMod:4)LYFIAPTGHSLK4	11676.2	5515.9	9094.63
Q5SGD7	Q5SGD7	CNKR3_RAT	Cnksr3	Connector enhancer of kinase suppressor of ras 3	1	IHAGDEVIQVNR	IHAGDEVIQVNR	3	IHAGDEVIQVNR3	2832.73	5029	4807.25
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	IHAGPITK	IHAGPITK	2	IHAGPITK2	69678.5	67464.5	47250.8
D4A6K4	D4A6K4	D4A6K4_RAT	Golga1	Golgin A1	1	IHALEAQIEALEQTR	IHALEAQIEALEQTR	3	IHALEAQIEALEQTR3		5405.79	
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	IHALEVELQNVGQSK	IHALEVELQNVGQSK	3	IHALEVELQNVGQSK3	13542.7	7911.5	4174.9
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	IHAYSQLLESYR	IHAYSQLLESYR	2	IHAYSQLLESYR2	14800	10696.7	14710.6
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	IHAYSQLLESYR	IHAYSQLLESYR	3	IHAYSQLLESYR3	85411.7	86380.6	104222
G3V6S0	Q9QWN8;G3V6S0;A0A8I6AWM3	G3V6S0_RAT	Sptbn1	Spectrin beta chain	0	IHCLENVDK	IHC(UniMod:4)LENVDK	2	IHC(UniMod:4)LENVDK2	110786	155806	139674
Q76LD0	Q76LD0	CRDL1_RAT	Chrdl1	Chordin-like protein 1	1	IHCPNRYPCK	IHC(UniMod:4)PNRYPC(UniMod:4)K	2	IHC(UniMod:4)PNRYPC(UniMod:4)K2	5380.1		6958.31
Q76LD0	Q76LD0	CRDL1_RAT	Chrdl1	Chordin-like protein 1	1	IHCPNRYPCK	IHC(UniMod:4)PNRYPC(UniMod:4)K	3	IHC(UniMod:4)PNRYPC(UniMod:4)K3	26510.1		32247.5
D3ZZC5	D3ZZC5	D3ZZC5_RAT	Tradd	Tumor necrosis factor receptor type 1-associated DEATH domain protein	1	IHCSDPQLIVQLR	IHC(UniMod:4)SDPQLIVQLR	3	IHC(UniMod:4)SDPQLIVQLR3	11378.9	3394.95	5252.63
Q566R4	Q566R4	LRA25_RAT	Fam89b	Leucine repeat adapter protein 25	1	IHDELSR	IHDELSR	2	IHDELSR2	30312.2	32095.1	
P33436	P33436	MMP2_RAT	Mmp2	72 kDa type IV collagenase	1	IHDGEADIMINFGR	IHDGEADIMINFGR	3	IHDGEADIMINFGR3	7940.79	9458.15	7778.57
P55280	P55280	CADH6_RAT	Cdh6	Cadherin-6	1	IHDINDNEPIFTK	IHDINDNEPIFTK	2	IHDINDNEPIFTK2	1485.6	3271.51	
P55280	P55280	CADH6_RAT	Cdh6	Cadherin-6	1	IHDINDNEPIFTK	IHDINDNEPIFTK	3	IHDINDNEPIFTK3	28554.3	16543.9	29832.6
P23764	P23764	GPX3_RAT	Gpx3	Glutathione peroxidase 3	1	IHDIRWNFEK	IHDIRWNFEK	3	IHDIRWNFEK3	8731.45	12662.7	6342.81
D3ZHK4	D3ZHK4	D3ZHK4_RAT	Rb1cc1	RB1-inducible coiled-coil 1	1	IHDNSESYQVGLSELR	IHDNSESYQVGLSELR	3	IHDNSESYQVGLSELR3		3851.1	4928.5
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	IHDPQLLTER	IHDPQLLTER	2	IHDPQLLTER2	35045.3	11033.4	21027.4
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	IHDPQLLTER	IHDPQLLTER	3	IHDPQLLTER3	103716	55215.6	91968.3
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	IHDTTGK	IHDTTGK	1	IHDTTGK1	159042	39723	88741.4
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	IHDTTGK	IHDTTGK	2	IHDTTGK2	104409	243774	420382
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	IHDTTGKDCQDIANK	IHDTTGKDC(UniMod:4)QDIANK	2	IHDTTGKDC(UniMod:4)QDIANK2	24973.6		179670
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	IHDTTGKDCQDIANK	IHDTTGKDC(UniMod:4)QDIANK	3	IHDTTGKDC(UniMod:4)QDIANK3	133711		99286.1
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	IHDTTGKDCQDIANK	IHDTTGKDC(UniMod:4)QDIANK	4	IHDTTGKDC(UniMod:4)QDIANK4	795945		1.77322e+06
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	IHDTTGKDCQDIANKGAK	IHDTTGKDC(UniMod:4)QDIANKGAK	3	IHDTTGKDC(UniMod:4)QDIANKGAK3			1058.75
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	IHEACMLALGSVK	IHEAC(UniMod:4)MLALGSVK	3	IHEAC(UniMod:4)MLALGSVK3	17706.8	19065.4	17370.8
P83888	P83888;A0A8I6A5N2	TBG1_RAT	Tubg1	Tubulin gamma-1 chain	0	IHEDIFDIIDR	IHEDIFDIIDR	3	IHEDIFDIIDR3	5055.99	6703	4305.08
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	IHEDSTGGIYTVGVTTR	IHEDSTGGIYTVGVTTR	3	IHEDSTGGIYTVGVTTR3	22097.2	21221.1	18416.2
D4ACF2	D4ACF2	D4ACF2_RAT	Trim21	RING-type E3 ubiquitin transferase	1	IHEEFAHQNSLLAQEEQR	IHEEFAHQNSLLAQEEQR	4	IHEEFAHQNSLLAQEEQR4	3042.54	5180.69	3411.29
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	IHEELER	IHEELER	2	IHEELER2	17833.5	17972.2	
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	IHEGCEEPATHNALAK	IHEGC(UniMod:4)EEPATHNALAK	2	IHEGC(UniMod:4)EEPATHNALAK2	10918.1	11346.8	18394.7
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	IHEGCEEPATHNALAK	IHEGC(UniMod:4)EEPATHNALAK	3	IHEGC(UniMod:4)EEPATHNALAK3	444867	454835	392048
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	IHEGCEEPATHNALAK	IHEGC(UniMod:4)EEPATHNALAK	4	IHEGC(UniMod:4)EEPATHNALAK4	1.48038e+06	1.59777e+06	1.66099e+06
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	IHEPIMLK	IHEPIMLK	2	IHEPIMLK2	46798.2	29853.3	45513
Q62915	Q62915	CSKP_RAT	Cask	Peripheral plasma membrane protein CASK	1	IHEQGLIAILDVEPQALK	IHEQGLIAILDVEPQALK	3	IHEQGLIAILDVEPQALK3	2259.82	6405	2238.15
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	IHETNLK	IHETNLK	2	IHETNLK2	95030.1		
Q6TUD3	Q6TUD3	Q6TUD3_RAT	Rdh11	LRRGT00111	1	IHFHNLHGEK	IHFHNLHGEK	3	IHFHNLHGEK3	25197	10080.9	27752
G3V784	G3V784	G3V784_RAT	Adpgk	ADP-dependent glucokinase	1	IHFHTLVYHILATVDGHWANQLAAVAAGAR	IHFHTLVYHILATVDGHWANQLAAVAAGAR	4	IHFHTLVYHILATVDGHWANQLAAVAAGAR4			2439.38
Q4KM35	Q4KM35	PSB10_RAT	Psmb10	Proteasome subunit beta type-10	1	IHFIAPK	IHFIAPK	1	IHFIAPK1	22327.7	16158	13481.3
Q4KM35	Q4KM35	PSB10_RAT	Psmb10	Proteasome subunit beta type-10	1	IHFIAPK	IHFIAPK	2	IHFIAPK2	95483.2	74907.8	70104.7
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	IHFIEAQDLQGK	IHFIEAQDLQGK	2	IHFIEAQDLQGK2	9207.23	6313.15	
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	IHFIEAQDLQGK	IHFIEAQDLQGK	3	IHFIEAQDLQGK3	51315.4	49660.5	58136.7
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	IHFLLNEDALK	IHFLLNEDALK	2	IHFLLNEDALK2	76167.1	65050.1	38958.3
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	IHFLLNEDALK	IHFLLNEDALK	3	IHFLLNEDALK3	275095	220870	191489
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	IHFLLNEDALKDAK	IHFLLNEDALKDAK	3	IHFLLNEDALKDAK3	77683.6	70357.1	68189
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	IHFLLNEDALKDAK	IHFLLNEDALKDAK	4	IHFLLNEDALKDAK4	195898	210168	204605
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	IHFLLNEDALKDAKDLTFYYLIK	IHFLLNEDALKDAKDLTFYYLIK	4	IHFLLNEDALKDAKDLTFYYLIK4		2847.32	
Q5XIF6	P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	IHFPLATYAPVISAEK	IHFPLATYAPVISAEK	2	IHFPLATYAPVISAEK2	8.17465e+06	8.65132e+06	7.91321e+06
Q5XIF6	P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	IHFPLATYAPVISAEK	IHFPLATYAPVISAEK	3	IHFPLATYAPVISAEK3	1.38022e+07	1.67465e+07	1.71077e+07
Q5XIF6	P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	IHFPLATYAPVISAEK	IHFPLATYAPVISAEK	4	IHFPLATYAPVISAEK4	19803.4	21368.5	21132.5
Q6AY56	Q6AY56	TBA8_RAT	Tuba8	Tubulin alpha-8 chain	1	IHFPLVTYAPIVSAEK	IHFPLVTYAPIVSAEK	2	IHFPLVTYAPIVSAEK2	185694	191951	182537
Q6AY56	Q6AY56	TBA8_RAT	Tuba8	Tubulin alpha-8 chain	1	IHFPLVTYAPIVSAEK	IHFPLVTYAPIVSAEK	3	IHFPLVTYAPIVSAEK3	516657	523491	538153
P70541	P70541	EI2BG_RAT	Eif2b3	Translation initiation factor eIF-2B subunit gamma	1	IHFQTGLVDAHLYCLK	IHFQTGLVDAHLYC(UniMod:4)LK	3	IHFQTGLVDAHLYC(UniMod:4)LK3	2829.42	5393.85	2761.36
P70541	P70541	EI2BG_RAT	Eif2b3	Translation initiation factor eIF-2B subunit gamma	1	IHFQTGLVDAHLYCLK	IHFQTGLVDAHLYC(UniMod:4)LK	4	IHFQTGLVDAHLYC(UniMod:4)LK4	15422.4	17279	17772.2
Q06000	Q06000	LIPL_RAT	Lpl	Lipoprotein lipase	1	IHFSGTENDK	IHFSGTENDK	3	IHFSGTENDK3	586.715	5231.02	4324.95
Q6AY61	Q6AY61	PRS23_RAT	Prss23	Serine protease 23	1	IHFSGYDNDRPGNLVYR	IHFSGYDNDRPGNLVYR	3	IHFSGYDNDRPGNLVYR3	31408.5	21841	6666.73
Q6AY61	Q6AY61	PRS23_RAT	Prss23	Serine protease 23	1	IHFSGYDNDRPGNLVYR	IHFSGYDNDRPGNLVYR	4	IHFSGYDNDRPGNLVYR4	16372.8	10315.1	11024
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	IHFSTAPIQVFSTYSNEDYDRR	IHFSTAPIQVFSTYSNEDYDRR	3	IHFSTAPIQVFSTYSNEDYDRR3	5865.9	4242.94	12026.1
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	IHFSTAPIQVFSTYSNEDYDRR	IHFSTAPIQVFSTYSNEDYDRR	4	IHFSTAPIQVFSTYSNEDYDRR4	13783.9	22287.3	15169.8
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	IHGALLILNELVR	IHGALLILNELVR	2	IHGALLILNELVR2	2033.7	3962.58	
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	IHGALLILNELVR	IHGALLILNELVR	3	IHGALLILNELVR3	30864.8	25787.9	26279.5
A0A8I6GK03	A0A8I6GK03	A0A8I6GK03_RAT	Tubgcp4	Gamma-tubulin complex component	1	IHGCQILETVYK	IHGC(UniMod:4)QILETVYK	3	IHGC(UniMod:4)QILETVYK3	6697.57	5284.17	6065.95
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	IHGFTVNQVTPVPELFLTAVK	IHGFTVNQVTPVPELFLTAVK	3	IHGFTVNQVTPVPELFLTAVK3	23474.3	16592.5	16377.3
B2RYP8	B2RYP8	B2RYP8_RAT	Tubgcp2	Gamma-tubulin complex component	1	IHGGDGAEVYIDLLQK	IHGGDGAEVYIDLLQK	3	IHGGDGAEVYIDLLQK3	4926.9	4505.55	
P41562	P41562	IDHC_RAT	Idh1	Isocitrate dehydrogenase [NADP] cytoplasmic	1	IHGGSVVEMQGDEMTR	IHGGSVVEMQGDEMTR	3	IHGGSVVEMQGDEMTR3	5749.21	8492.17	17217.1
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	IHGIIAEENK	IHGIIAEENK	2	IHGIIAEENK2	21593.4	12470.1	15651.5
F7EUH5	F7EUH5	F7EUH5_RAT	Plxdc2	Plexin domain containing 2	1	IHGILSNTHR	IHGILSNTHR	2	IHGILSNTHR2	86137.7	70038.1	56890.2
F7EUH5	F7EUH5	F7EUH5_RAT	Plxdc2	Plexin domain containing 2	1	IHGILSNTHR	IHGILSNTHR	3	IHGILSNTHR3	325832	268344	291440
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	IHGITVEDVK	IHGITVEDVK	2	IHGITVEDVK2	18326	11922.1	17511.4
Q6Q0N0	Q6Q0N0	CSTN1_RAT	Clstn1	Calsyntenin-1	1	IHGQNVPFDAVVVDK	IHGQNVPFDAVVVDK	3	IHGQNVPFDAVVVDK3	19656.9	20359	15930
Q6P7D4	Q6P7D4	CP20A_RAT	Cyp20a1	Cytochrome P450 20A1	1	IHGTVWSEIGK	IHGTVWSEIGK	3	IHGTVWSEIGK3	17235.1	18670.5	17606.5
D3ZBX9	D3ZBX9	D3ZBX9_RAT	Ccdc92	Coiled-coil domain containing 92	1	IHHATPSQAQPEGETR	IHHATPSQAQPEGETR	3	IHHATPSQAQPEGETR3			14323.5
D3ZBX9	D3ZBX9	D3ZBX9_RAT	Ccdc92	Coiled-coil domain containing 92	1	IHHATPSQAQPEGETR	IHHATPSQAQPEGETR	4	IHHATPSQAQPEGETR4			8822.42
B2RYP8	B2RYP8	B2RYP8_RAT	Tubgcp2	Gamma-tubulin complex component	1	IHHDVNELLSLLR	IHHDVNELLSLLR	3	IHHDVNELLSLLR3	10059.6	4834.31	9639.5
B5DEH2	B5DEH2	ERLN2_RAT	Erlin2	Erlin-2	1	IHHELNQFCSVHTLQEVYIELFDQIDENLK	IHHELNQFC(UniMod:4)SVHTLQEVYIELFDQIDENLK	4	IHHELNQFC(UniMod:4)SVHTLQEVYIELFDQIDENLK4	7004.37	2899.75	4795.79
D3Z8X6	D3Z8X6	D3Z8X6_RAT	Dtx3l	E3 ubiquitin-protein ligase	1	IHHFLSSQLLESEPTRK	IHHFLSSQLLESEPTRK	4	IHHFLSSQLLESEPTRK4		3603.64	5198.61
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	IHHLEYTDGGILDPDDVLADVVEDKDK	IHHLEYTDGGILDPDDVLADVVEDKDK	4	IHHLEYTDGGILDPDDVLADVVEDKDK4	8882.7	7489.14	15554.4
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	IHIDLPNEQAR	IHIDLPNEQAR	2	IHIDLPNEQAR2	45533.7	39413.9	45865.2
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	IHIDLPNEQAR	IHIDLPNEQAR	3	IHIDLPNEQAR3	200623	176035	172950
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	IHIEGEPDFR	IHIEGEPDFR	2	IHIEGEPDFR2	29899.4	32657.5	37982.7
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	IHIEGEPDFR	IHIEGEPDFR	3	IHIEGEPDFR3	66585.9	76529.9	64555.3
D4A7R3	D4A7R3	D4A7R3_RAT	Nup205	Nucleoporin 205	1	IHILNLLITSLER	IHILNLLITSLER	3	IHILNLLITSLER3	2345.71	6509.98	252.042
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	IHILPSMNPDGYEVAAAQGPNTSGYLVGR	IHILPSMNPDGYEVAAAQGPNTSGYLVGR	4	IHILPSMNPDGYEVAAAQGPNTSGYLVGR4	51524	38119.3	39525.1
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	IHILSFLSGLAECR	IHILSFLSGLAEC(UniMod:4)R	2	IHILSFLSGLAEC(UniMod:4)R2	10879		
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	IHILSFLSGLAECR	IHILSFLSGLAEC(UniMod:4)R	3	IHILSFLSGLAEC(UniMod:4)R3	11110.4	12099.7	11607.4
P15087	P15087	CBPE_RAT	Cpe	Carboxypeptidase E	1	IHIMPSLNPDGFEK	IHIMPSLNPDGFEK	3	IHIMPSLNPDGFEK3	5736.47	8362.07	3501.35
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	IHISDVMATDLPGLEDLGVQPTPLELK	IHISDVMATDLPGLEDLGVQPTPLELK	3	IHISDVMATDLPGLEDLGVQPTPLELK3	17751	49747.8	34698.7
D3ZXJ5	D3ZXJ5	D3ZXJ5_RAT	Efl1	Elongation factor like GTPase 1	1	IHISVSEPIIPFR	IHISVSEPIIPFR	3	IHISVSEPIIPFR3	1964.73	8033.67	8154.28
Q9Z272	Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	1	IHLAVTEMASLFPK	IHLAVTEMASLFPK	3	IHLAVTEMASLFPK3	3218.09	3120.46	3215.34
Q497B0	Q497B0	NIT2_RAT	Nit2	Omega-amidase NIT2	1	IHLFDIDVPGK	IHLFDIDVPGK	3	IHLFDIDVPGK3	33419.8	34569.3	46187.4
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	IHLISMQSTIPYALR	IHLISMQSTIPYALR	2	IHLISMQSTIPYALR2	21577.2	12976.3	7500.19
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	IHLISMQSTIPYALR	IHLISMQSTIPYALR	3	IHLISMQSTIPYALR3	229511	242918	240176
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	IHLISMQSTIPYALR	IHLISMQSTIPYALR	4	IHLISMQSTIPYALR4	78643.5	69311.5	75455.3
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	IHLISMQSTIPYALRIQLKDWSGR	IHLISMQSTIPYALRIQLKDWSGR	4	IHLISMQSTIPYALRIQLKDWSGR4	71822.1	40105.7	65838.1
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	IHLLAAR	IHLLAAR	2	IHLLAAR2	226402	156808	170274
Q9JHW1	Q9JHW1	CBPD_RAT	Cpd	Carboxypeptidase D	1	IHLMPSMNPDGYEK	IHLMPSMNPDGYEK	3	IHLMPSMNPDGYEK3	5130.12	6333.02	13221.1
P23640	P23640	RB27A_RAT	Rab27a	Ras-related protein Rab-27A	1	IHLQLWDTAGQER	IHLQLWDTAGQER	2	IHLQLWDTAGQER2	44591.5	28118.7	33863
P23640	P23640	RB27A_RAT	Rab27a	Ras-related protein Rab-27A	1	IHLQLWDTAGQER	IHLQLWDTAGQER	3	IHLQLWDTAGQER3	248223	241707	256555
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	IHLQPGK	IHLQPGK	1	IHLQPGK1	1.48003e+06	1.60878e+06	1.41851e+06
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	IHLQPGK	IHLQPGK	2	IHLQPGK2	1.9914e+07	2.21687e+07	2.08428e+07
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	IHLQPGKLAK	IHLQPGKLAK	2	IHLQPGKLAK2	4770.06	4944.4	3166.93
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	IHLQPGKLAKHLEVNVWIIEPQGMR	IHLQPGKLAKHLEVNVWIIEPQGMR	3	IHLQPGKLAKHLEVNVWIIEPQGMR3	32574.6	17666	20645.2
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	IHLQPGKLAKHLEVNVWIIEPQGMR	IHLQPGKLAKHLEVNVWIIEPQGMR	4	IHLQPGKLAKHLEVNVWIIEPQGMR4	333742	319885	270646
B5DEH0	B5DEH0	LIMD1_RAT	Limd1	LIM domain-containing protein 1	1	IHLQQQQQQQLLQEEALPR	IHLQQQQQQQLLQEEALPR	3	IHLQQQQQQQLLQEEALPR3	13416	8537.62	12039.4
O35462	O35462	ANGP2_RAT	Angpt2	Angiopoietin-2	1	IHLTGLTGTAGK	IHLTGLTGTAGK	3	IHLTGLTGTAGK3	6141.07		6458.35
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	IHLTPDFLAGK	IHLTPDFLAGK	2	IHLTPDFLAGK2	9838.11	11434	3871.27
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	IHLTPDFLAGK	IHLTPDFLAGK	3	IHLTPDFLAGK3	20358.9	27081	24600.2
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	IHLVCGR	IHLVC(UniMod:4)GR	2	IHLVC(UniMod:4)GR2	16482.4	11367.6	10516.9
A0A8I5ZVW2	A0A8I5ZVW2	A0A8I5ZVW2_RAT	Kif16b	Kinesin family member 16B	1	IHLVDLAGSER	IHLVDLAGSER	2	IHLVDLAGSER2		12736.3	
A0A8I5ZVW2	A0A8I5ZVW2	A0A8I5ZVW2_RAT	Kif16b	Kinesin family member 16B	1	IHLVDLAGSER	IHLVDLAGSER	3	IHLVDLAGSER3	25514.7	25444.1	31044.6
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	IHLVVFNNLQLADGR	IHLVVFNNLQLADGR	2	IHLVVFNNLQLADGR2	7727.95	11014.7	5910.48
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	IHLVVFNNLQLADGR	IHLVVFNNLQLADGR	3	IHLVVFNNLQLADGR3	32323.2	33823.8	36941.5
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	IHLVVFNNLQLADGRR	IHLVVFNNLQLADGRR	3	IHLVVFNNLQLADGRR3	23384.9	21525.6	33508.9
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	IHLVVFNNLQLADGRR	IHLVVFNNLQLADGRR	4	IHLVVFNNLQLADGRR4	22668.8	40196.3	26568.7
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	IHLYTLNDNAR	IHLYTLNDNAR	2	IHLYTLNDNAR2	2.784e+07	2.5181e+07	2.09519e+07
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	IHLYTLNDNAR	IHLYTLNDNAR	3	IHLYTLNDNAR3	182453	199855	207319
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	IHMGNCAENTAK	IHMGNC(UniMod:4)AENTAK	2	IHMGNC(UniMod:4)AENTAK2	59634.1	8716.28	72972.1
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	IHMGNCAENTAK	IHMGNC(UniMod:4)AENTAK	3	IHMGNC(UniMod:4)AENTAK3	286152		326516
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	IHMGNCAENTAKK	IHMGNC(UniMod:4)AENTAKK	3	IHMGNC(UniMod:4)AENTAKK3			6517.87
A0A8I6GJC5	A0A8I6GJC5	A0A8I6GJC5_RAT	Reps1	RALBP1 associated Eps domain containing 1	1	IHMQEMELK	IHMQEMELK	2	IHMQEMELK2	8037.66	6357.66	5759.46
A0A8I6GJC5	A0A8I6GJC5	A0A8I6GJC5_RAT	Reps1	RALBP1 associated Eps domain containing 1	1	IHMQEMELK	IHMQEMELK	3	IHMQEMELK3	7858.03	11316.8	9929.36
Q58NB7	Q58NB7	Q58NB7_RAT	Rarres1	Retinoic acid receptor responder (Tazarotene induced) 1	1	IHMVWYPGKPLK	IHMVWYPGKPLK	3	IHMVWYPGKPLK3	29649.3	28862.8	23574
A0A8J8YRV3	A0A8J8YRV3	A0A8J8YRV3_RAT	Drg1	Developmentally regulated GTP binding protein 1	1	IHNADVTLR	IHNADVTLR	2	IHNADVTLR2	11465.2	7633.45	3248.28
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	IHNAENIQPGEQK	IHNAENIQPGEQK	2	IHNAENIQPGEQK2	48033.5	52299.8	27371.5
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	IHNAENIQPGEQK	IHNAENIQPGEQK	3	IHNAENIQPGEQK3	533513	650529	589867
B4F7E7	B4F7E7	PALS1_RAT	Pals1	Protein PALS1	1	IHNAVTVHMNK	IHNAVTVHMNK	3	IHNAVTVHMNK3		4721.08	
Q9Z144	Q9Z144	LEG2_RAT	Lgals2	Galectin-2	1	IHNDVNSFTINLGQGK	IHNDVNSFTINLGQGK	3	IHNDVNSFTINLGQGK3	3296.55	3393.72	
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	IHNFGVIQEK	IHNFGVIQEK	2	IHNFGVIQEK2	14450.6	6024.42	8270.43
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	IHNFGVIQEK	IHNFGVIQEK	3	IHNFGVIQEK3	32887	31977.1	33485.8
O08618	O08618	KPRB_RAT	Prpsap2	Phosphoribosyl pyrophosphate synthase-associated protein 2	1	IHNGESMSYLFR	IHNGESMSYLFR	3	IHNGESMSYLFR3	7984.93	5379.63	2144.05
B2RYM5	B2RYM5;A0A8I6AEX4	BRCC3_RAT	Brcc3	Lys-63-specific deubiquitinase BRCC36	0	IHNGSVFTK	IHNGSVFTK	2	IHNGSVFTK2	19399.7	8085.33	22328.4
D3ZW34	D3ZW34	D3ZW34_RAT	Adamdec1	ADAM-like, decysin 1	1	IHNHAQLLSGAGFLHGR	IHNHAQLLSGAGFLHGR	4	IHNHAQLLSGAGFLHGR4	7072.98	6269.91	1821.82
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	IHNLTAYLQTLHR	IHNLTAYLQTLHR	3	IHNLTAYLQTLHR3	5906.96	7849.76	4125.74
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	IHNLTAYLQTLHR	IHNLTAYLQTLHR	4	IHNLTAYLQTLHR4	13105.9	13582.6	12600.6
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	IHNNTFDPALIGDKPK	IHNNTFDPALIGDKPK	3	IHNNTFDPALIGDKPK3	11344	10812.4	9867.96
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	IHNNTFDPALIGDKPK	IHNNTFDPALIGDKPK	4	IHNNTFDPALIGDKPK4	21223.8	21766.3	19166.3
D3ZJD8	D3ZJD8	D3ZJD8_RAT	Clec1b	C-type lectin domain family 1 member B	1	IHPASCTER	IHPASC(UniMod:4)TER	2	IHPASC(UniMod:4)TER2			840388
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	IHPEASGPAAIQQDSCEESEVR	IHPEASGPAAIQQDSC(UniMod:4)EESEVR	3	IHPEASGPAAIQQDSC(UniMod:4)EESEVR3	40129	43966.3	40868.4
D3ZRN5	D3ZRN5	D3ZRN5_RAT	Ro60	Ro60, Y RNA binding protein	1	IHPFHVLTALETYR	IHPFHVLTALETYR	3	IHPFHVLTALETYR3	1882.86	6701.34	5604.12
P67874	P67874	CSK2B_RAT	Csnk2b	Casein kinase II subunit beta	1	IHPMAYQLQLQAASNFK	IHPMAYQLQLQAASNFK	3	IHPMAYQLQLQAASNFK3	49116.3	36161.2	29159.5
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	IHPQTIIAGWR	IHPQTIIAGWR	2	IHPQTIIAGWR2	140247	95012.6	96596.6
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	IHPQTIIAGWR	IHPQTIIAGWR	3	IHPQTIIAGWR3	207652	197841	221336
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	IHPQVWER	IHPQVWER	2	IHPQVWER2	212888	241035	193788
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	IHPTSVISGYR	IHPTSVISGYR	2	IHPTSVISGYR2	231180	210676	201600
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	IHPTSVISGYR	IHPTSVISGYR	3	IHPTSVISGYR3	451646	444702	441889
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	IHQALKEDILEFIK	IHQALKEDILEFIK	3	IHQALKEDILEFIK3	2228.96	1515.95	2925.55
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	IHQALKEDILEFIK	IHQALKEDILEFIK	4	IHQALKEDILEFIK4	6978.29	5298.88	7386.76
Q641X8	Q641X8	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	1	IHQCISINMLADK	IHQC(UniMod:4)ISINMLADK	3	IHQC(UniMod:4)ISINMLADK3	7133.89	8966.33	10641.1
Q641X8	Q641X8	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	1	IHQCISINMLADKLNMTPEEAER	IHQC(UniMod:4)ISINMLADKLNMTPEEAER	4	IHQC(UniMod:4)ISINMLADKLNMTPEEAER4		7593.4	4042.58
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	IHQDGIHILVNMNGYTK	IHQDGIHILVNMNGYTK	4	IHQDGIHILVNMNGYTK4	10048.6	3584.93	5447.3
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	IHQDMIR	IHQDMIR	2	IHQDMIR2	9324.86	11918.5	10141.2
D4A4T0	D4A4T0	D4A4T0_RAT	Stub1	STIP1 homology and U-box containing protein 1	1	IHQESELHSYLTR	IHQESELHSYLTR	4	IHQESELHSYLTR4	2.00032e+06	1.49162e+06	1.65863e+06
Q5XI64	Q5XI64	ABHD6_RAT	Abhd6	Monoacylglycerol lipase ABHD6	1	IHQFVECLK	IHQFVEC(UniMod:4)LK	2	IHQFVEC(UniMod:4)LK2	7425.81	4743.52	
Q5XI64	Q5XI64	ABHD6_RAT	Abhd6	Monoacylglycerol lipase ABHD6	1	IHQFVECLK	IHQFVEC(UniMod:4)LK	3	IHQFVEC(UniMod:4)LK3	36312.1	25359.5	34275.5
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	IHQIELIPSDQLVAVISGR	IHQIELIPSDQLVAVISGR	3	IHQIELIPSDQLVAVISGR3	46079.5	45123.7	39889.4
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	IHQIEYAMEAVK	IHQIEYAMEAVK	2	IHQIEYAMEAVK2	396894	356382	376556
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	IHQIEYAMEAVK	IHQIEYAMEAVK	3	IHQIEYAMEAVK3	2.24455e+06	2.19478e+06	2.46972e+06
P63036	P63036	DNJA1_RAT	Dnaja1	DnaJ homolog subfamily A member 1	1	IHQIGPGMVQQIQSVCMECQGHGER	IHQIGPGMVQQIQSVC(UniMod:4)MEC(UniMod:4)QGHGER	4	IHQIGPGMVQQIQSVC(UniMod:4)MEC(UniMod:4)QGHGER4	44208	40725.4	28011.9
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	IHQQIIR	IHQQIIR	2	IHQQIIR2	18915.2	17590	27478.7
P80385	P80385	AAKG1_RAT	Prkag1	5'-AMP-activated protein kinase subunit gamma-1	1	IHRLPVIDPESGNTLYILTHK	IHRLPVIDPESGNTLYILTHK	4	IHRLPVIDPESGNTLYILTHK4	4389.86	4051.65	3393.42
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	IHSAFSSLSSTINTPR	IHSAFSSLSSTINTPR	2	IHSAFSSLSSTINTPR2	9209.37	12192.6	8494.2
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	IHSAFSSLSSTINTPR	IHSAFSSLSSTINTPR	3	IHSAFSSLSSTINTPR3	131875	146700	157222
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	IHSANPELTDGQIQAMLR	IHSANPELTDGQIQAMLR	3	IHSANPELTDGQIQAMLR3	6629.07	17252.6	4997.52
D3ZM39	D3ZM39	D3ZM39_RAT	Dsg1	Desmoglein 1	1	IHSDCAANQPVTYR	IHSDC(UniMod:4)AANQPVTYR	3	IHSDC(UniMod:4)AANQPVTYR3	5274.07	6481.84	5967.31
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	IHSDIVK	IHSDIVK	2	IHSDIVK2	58091.9	58074.7	56104.7
F1LYX9	F1LYX9	F1LYX9_RAT	Dsg2	Desmoglein 2	1	IHSDLAEER	IHSDLAEER	2	IHSDLAEER2	42565.1	34215.7	34754.4
A0A0U1RRU5	A0A0U1RRU5	A0A0U1RRU5_RAT	Tab1	TGF-beta activated kinase 1/MAP3K7 binding protein 1	1	IHSDTFASGGER	IHSDTFASGGER	2	IHSDTFASGGER2	6616.35	4461.73	5917.85
A0A0U1RRU5	A0A0U1RRU5	A0A0U1RRU5_RAT	Tab1	TGF-beta activated kinase 1/MAP3K7 binding protein 1	1	IHSDTFASGGER	IHSDTFASGGER	3	IHSDTFASGGER3	5855.4	11485.6	9376.64
P53534	P53534	PYGB_RAT	Pygb	Glycogen phosphorylase, brain form (Fragment)	1	IHSEIVK	IHSEIVK	2	IHSEIVK2	10454.1	13577.3	
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	IHSEMSPLK	IHSEMSPLK	2	IHSEMSPLK2	10057.4	8358.37	7984.56
Q9Z1S7	Q9Z1S7	OMD_RAT	Omd	Osteomodulin	1	IHSIYYGEQR	IHSIYYGEQR	2	IHSIYYGEQR2	225772	170213	201235
Q9Z1S7	Q9Z1S7	OMD_RAT	Omd	Osteomodulin	1	IHSIYYGEQR	IHSIYYGEQR	3	IHSIYYGEQR3	1.00973e+06	986150	1.07836e+06
B2RYM5	B2RYM5	BRCC3_RAT	Brcc3	Lys-63-specific deubiquitinase BRCC36	1	IHSLTHLDSVTK	IHSLTHLDSVTK	2	IHSLTHLDSVTK2	7017.34	5490.43	6036.32
B2RYM5	B2RYM5	BRCC3_RAT	Brcc3	Lys-63-specific deubiquitinase BRCC36	1	IHSLTHLDSVTK	IHSLTHLDSVTK	3	IHSLTHLDSVTK3	49756.5	43544.1	46216.8
Q9QX79	Q9QX79	FETUB_RAT	Fetub	Fetuin-B	1	IHSMCPDCPHPVDLSAPSVLEAATESLAK	IHSMC(UniMod:4)PDC(UniMod:4)PHPVDLSAPSVLEAATESLAK	4	IHSMC(UniMod:4)PDC(UniMod:4)PHPVDLSAPSVLEAATESLAK4	1.30814e+06	1.37989e+06	1.40016e+06
D4A6X7	D4A6X7	D4A6X7_RAT	Ppcs	Phosphopantothenoylcysteine synthetase	1	IHSSGGPLQITMK	IHSSGGPLQITMK	3	IHSSGGPLQITMK3	4481.25	4258.41	3513.61
A0A8I6A5F4	A0A8I6A5F4	A0A8I6A5F4_RAT	Tmem40	Transmembrane protein 40	1	IHSVLQGFIPLLQK	IHSVLQGFIPLLQK	2	IHSVLQGFIPLLQK2	5669.02	6973.87	7546.04
A0A8I6A5F4	A0A8I6A5F4	A0A8I6A5F4_RAT	Tmem40	Transmembrane protein 40	1	IHSVLQGFIPLLQK	IHSVLQGFIPLLQK	3	IHSVLQGFIPLLQK3	49443.2	47524.4	49088.8
A0A8I5ZXD6	D4A5F0;A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	0	IHSVNSGSPEGALTDAENR	IHSVNSGSPEGALTDAENR	2	IHSVNSGSPEGALTDAENR2	1252.65		1624.02
A0A8I5ZXD6	D4A5F0;A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	0	IHSVNSGSPEGALTDAENR	IHSVNSGSPEGALTDAENR	3	IHSVNSGSPEGALTDAENR3	36449	42627.5	31902.3
A0JPJ7	A0JPJ7	OLA1_RAT	Ola1	Obg-like ATPase 1	1	IHTDFEK	IHTDFEK	2	IHTDFEK2	23400.5	17101.9	9681.25
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	IHTDIDSQGTFFTDLNGFQVQPR	IHTDIDSQGTFFTDLNGFQVQPR	3	IHTDIDSQGTFFTDLNGFQVQPR3	7327.35	4376.34	5468.95
Q8CHJ4	Q8CHJ4	Q8CHJ4_RAT	Yy1	Transcription factor YY1	1	IHTGDRPYVCPFDGCNK	IHTGDRPYVC(UniMod:4)PFDGC(UniMod:4)NK	4	IHTGDRPYVC(UniMod:4)PFDGC(UniMod:4)NK4	9917.95		
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	IHTGLLK	IHTGLLK	2	IHTGLLK2	24275.9	27333.4	18610.4
A0A8I6GM04	A0A0G2K988;A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	0	IHTSLIGCIK	IHTSLIGC(UniMod:4)IK	3	IHTSLIGC(UniMod:4)IK3	83133.9	79748.6	62741.2
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	IHTTEFEWPK	IHTTEFEWPK	3	IHTTEFEWPK3	176658	129567	240958
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	IHTYGSPTFCDHCGSLLYGLIHQGMK	IHTYGSPTFC(UniMod:4)DHC(UniMod:4)GSLLYGLIHQGMK	4	IHTYGSPTFC(UniMod:4)DHC(UniMod:4)GSLLYGLIHQGMK4	76521	47774.5	67154.6
Q63488	Q63488	S20A2_RAT	Slc20a2	Sodium-dependent phosphate transporter 2	1	IHVDKGPEEKPAQENNYR	IHVDKGPEEKPAQENNYR	4	IHVDKGPEEKPAQENNYR4	6951.48	7576.02	
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	IHVDLFDLESGEYLCPLCK	IHVDLFDLESGEYLC(UniMod:4)PLC(UniMod:4)K	3	IHVDLFDLESGEYLC(UniMod:4)PLC(UniMod:4)K3	15557.2	13030.4	16723.4
D4AD89	D4AD89	D4AD89_RAT	Sez6l	Seizure related 6 homolog like	1	IHVGEEK	IHVGEEK	2	IHVGEEK2	3709.44		4896.65
Q1RP74	Q1RP74	Q1RP74_RAT	Tbcb	Tubulin folding cofactor B	1	IHVIDHSGVR	IHVIDHSGVR	2	IHVIDHSGVR2	16565.8	7350.73	14329.7
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	IHVLEAQDLIAK	IHVLEAQDLIAK	2	IHVLEAQDLIAK2	213742	160820	178408
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	IHVLEAQDLIAK	IHVLEAQDLIAK	3	IHVLEAQDLIAK3	41375	57316.7	43364
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	IHVLLLVLHGGTILDTGAGDPSSK	IHVLLLVLHGGTILDTGAGDPSSK	4	IHVLLLVLHGGTILDTGAGDPSSK4	5360.63	2239.61	
F1LTR1	F1LTR1	WDR26_RAT	Wdr26	WD repeat-containing protein 26	1	IHVLSGYLMCSHAEDLR	IHVLSGYLMC(UniMod:4)SHAEDLR	4	IHVLSGYLMC(UniMod:4)SHAEDLR4	7635	6110.53	14167.5
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	IHVSDQELQSANASVDDSR	IHVSDQELQSANASVDDSR	3	IHVSDQELQSANASVDDSR3	14387.6	8806.17	12064.3
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	IHVSDQELQSANASVDDSRLEELK	IHVSDQELQSANASVDDSRLEELK	3	IHVSDQELQSANASVDDSRLEELK3	20605	14108.7	11215.5
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	IHVSDQELQSANASVDDSRLEELK	IHVSDQELQSANASVDDSRLEELK	4	IHVSDQELQSANASVDDSRLEELK4	72494.7	61376.1	42820
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	IHVSLEMSPDFLAVPVGSHEDSHCICGNER	IHVSLEMSPDFLAVPVGSHEDSHC(UniMod:4)IC(UniMod:4)GNER	4	IHVSLEMSPDFLAVPVGSHEDSHC(UniMod:4)IC(UniMod:4)GNER4	1.36977e+06	1.32509e+06	988819
G3V7L4	G3V7L4	G3V7L4_RAT	Cdh16	Cadherin 16	1	IHVTMELDR	IHVTMELDR	2	IHVTMELDR2	5954.93	7069.55	10928.7
G3V7L4	G3V7L4	G3V7L4_RAT	Cdh16	Cadherin 16	1	IHVTMELDREAQAEYQLQVR	IHVTMELDREAQAEYQLQVR	4	IHVTMELDREAQAEYQLQVR4	5338.87	4004.88	3269.85
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	IHVVDSGLTFNLPYPLILRPQR	IHVVDSGLTFNLPYPLILRPQR	3	IHVVDSGLTFNLPYPLILRPQR3	29996.7	31312.6	20878
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	IHVVDSGLTFNLPYPLILRPQR	IHVVDSGLTFNLPYPLILRPQR	4	IHVVDSGLTFNLPYPLILRPQR4	46175.8	46311	33673
Q6P6S9	Q6P6S9	ENTP5_RAT	Entpd5	Ectonucleoside triphosphate diphosphohydrolase 5	1	IHVYTFVQR	IHVYTFVQR	3	IHVYTFVQR3	10034.1	4638.52	4816.77
D3ZWZ9	D3ZWZ9	GP107_RAT	Gpr107	Protein GPR107	1	IHWLMAALPFTK	IHWLMAALPFTK	3	IHWLMAALPFTK3		5000.18	3486.79
Q63009	Q63009;A0A0G2K9I8	ANM1_RAT	Prmt1	Protein arginine N-methyltransferase 1	0	IHWWENVYGFDMSCIK	IHWWENVYGFDMSC(UniMod:4)IK	3	IHWWENVYGFDMSC(UniMod:4)IK3	11593.9	18393.2	11772.8
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	IHYIELQESR	IHYIELQESR	3	IHYIELQESR3	24147.3	30312.9	33621.6
Q5U2U2	Q5U2U2	CRKL_RAT	Crkl	Crk-like protein	1	IHYLDTTTLIEPAPR	IHYLDTTTLIEPAPR	2	IHYLDTTTLIEPAPR2	2128.9	2954.71	836.751
Q5U2U2	Q5U2U2	CRKL_RAT	Crkl	Crk-like protein	1	IHYLDTTTLIEPAPR	IHYLDTTTLIEPAPR	3	IHYLDTTTLIEPAPR3	68522.7	50826.3	66814
Q63768	Q63768	CRK_RAT	Crk	Adapter molecule crk	1	IHYLDTTTLIEPVSR	IHYLDTTTLIEPVSR	2	IHYLDTTTLIEPVSR2	3011.68		2923.52
Q63768	Q63768	CRK_RAT	Crk	Adapter molecule crk	1	IHYLDTTTLIEPVSR	IHYLDTTTLIEPVSR	3	IHYLDTTTLIEPVSR3	39831.2	48264.8	23526.8
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	IHYSVPIK	IHYSVPIK	2	IHYSVPIK2	126797	107428	96153.3
P23711	P23711	HMOX2_RAT	Hmox2	Heme oxygenase 2	1	IHYVGQNEPELLVAHAYTR	IHYVGQNEPELLVAHAYTR	3	IHYVGQNEPELLVAHAYTR3	9628.76	11124.8	
P23711	P23711	HMOX2_RAT	Hmox2	Heme oxygenase 2	1	IHYVGQNEPELLVAHAYTR	IHYVGQNEPELLVAHAYTR	4	IHYVGQNEPELLVAHAYTR4	29331	35137.9	33109.8
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	IIAAHEVGHALGLGHSR	IIAAHEVGHALGLGHSR	3	IIAAHEVGHALGLGHSR3	36535.7	32850.4	28774
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	IIAAHEVGHALGLGHSR	IIAAHEVGHALGLGHSR	4	IIAAHEVGHALGLGHSR4	107300	97003.8	100583
P97697	P97697	IMPA1_RAT	Impa1	Inositol monophosphatase 1	1	IIAASNIALAER	IIAASNIALAER	2	IIAASNIALAER2	25973.1	16583.6	23085.4
P08650	P08650	CO5_RAT	C5	Complement C5	1	IIACASYKPSK	IIAC(UniMod:4)ASYKPSK	2	IIAC(UniMod:4)ASYKPSK2	41635.1	25744.6	18619.3
P08650	P08650	CO5_RAT	C5	Complement C5	1	IIACASYKPSK	IIAC(UniMod:4)ASYKPSK	3	IIAC(UniMod:4)ASYKPSK3	241062	214294	163834
M0RAX2	P52504;M0RAX2	M0RAX2_RAT	Ndufs6l1	NADH dehydrogenase (ubiquinone) Fe-S protein 6	0	IIACDGGGGALGHPK	IIAC(UniMod:4)DGGGGALGHPK	2	IIAC(UniMod:4)DGGGGALGHPK2	8760.72	5900.62	4159.44
M0RAX2	P52504;M0RAX2	M0RAX2_RAT	Ndufs6l1	NADH dehydrogenase (ubiquinone) Fe-S protein 6	0	IIACDGGGGALGHPK	IIAC(UniMod:4)DGGGGALGHPK	3	IIAC(UniMod:4)DGGGGALGHPK3	77920	114408	75442.9
O35760	O35760	IDI1_RAT	Idi1	Isopentenyl-diphosphate Delta-isomerase 1	1	IIADAFLFK	IIADAFLFK	2	IIADAFLFK2	11060.9		12227.6
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	IIADAGATVR	IIADAGATVR	2	IIADAGATVR2	30395.9	47539.7	30626.7
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	IIADDLMK	IIADDLMK	2	IIADDLMK2	34264.3	67022.7	83774.4
D3ZKG1	D3ZKG1	D3ZKG1_RAT	Mmut	Methylmalonyl-CoA mutase, mitochondrial	1	IIADIFQYTAQHMPK	IIADIFQYTAQHMPK	3	IIADIFQYTAQHMPK3	5802.26	10622	6126.96
B2RZB5	B2RZB5	B2RZB5_RAT	Chmp2a	Charged multivesicular body protein 2A	1	IIADIKK	IIADIKK	2	IIADIKK2	17267.8	17944.5	13158
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	IIADLEEEQR	IIADLEEEQR	2	IIADLEEEQR2	217929	223491	181409
Q5XIA1	Q5XIA1	NCLN_RAT	Ncln	BOS complex subunit NCLN	1	IIAEALTR	IIAEALTR	2	IIAEALTR2	107982	140491	139546
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	IIAEEAIAAGVPVEVLK	IIAEEAIAAGVPVEVLK	2	IIAEEAIAAGVPVEVLK2	57284	42865.8	42908.5
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	IIAEEAIAAGVPVEVLK	IIAEEAIAAGVPVEVLK	3	IIAEEAIAAGVPVEVLK3	55041.8	56020.9	50671.6
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	IIAEGANGPTTPEADK	IIAEGANGPTTPEADK	2	IIAEGANGPTTPEADK2	86689	92562	75226.8
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	IIAEGANGPTTPEADK	IIAEGANGPTTPEADK	3	IIAEGANGPTTPEADK3	5431.17	6895.85	8138.69
P19814	P19814	TGON3_RAT	Ttgn1	Trans-Golgi network integral membrane protein TGN38	1	IIAFALEGK	IIAFALEGK	2	IIAFALEGK2	23568.6	19981.1	22354
O88321	O88321	O88321_RAT	Psmd4	26S proteasome non-ATPase regulatory subunit 4	1	IIAFVGSPVEDNEK	IIAFVGSPVEDNEK	2	IIAFVGSPVEDNEK2	25478.6	28178.3	25879.6
O88321	O88321	O88321_RAT	Psmd4	26S proteasome non-ATPase regulatory subunit 4	1	IIAFVGSPVEDNEKDLVK	IIAFVGSPVEDNEKDLVK	3	IIAFVGSPVEDNEKDLVK3	194801	185121	207448
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	IIAGDKEVVIAQK	IIAGDKEVVIAQK	3	IIAGDKEVVIAQK3	119120	144018	118901
P21531	P21531	RL3_RAT	Rpl3	Large ribosomal subunit protein uL3	1	IIAHTQMR	IIAHTQMR	2	IIAHTQMR2	3853.98	7607.5	8291.46
Q66H50	Q66H50	FACR1_RAT	Far1	Fatty acyl-CoA reductase 1	1	IIAINSELTQPK	IIAINSELTQPK	2	IIAINSELTQPK2	10065.4	8294.6	8680.04
D4A830	D4A830	D4A830_RAT	Ppa2	inorganic diphosphatase	1	IIAINVNDPEAEK	IIAINVNDPEAEK	2	IIAINVNDPEAEK2	35687.7	30839.8	41027.5
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	IIALDGDTK	IIALDGDTK	2	IIALDGDTK2	200786	202320	202875
P21588	P21588	5NTD_RAT	Nt5e	5'-nucleotidase	1	IIALGHSGFEMDK	IIALGHSGFEMDK	3	IIALGHSGFEMDK3	22845.7	19813.8	30493.1
A0A8I6AE33	A0A8I6AE33	A0A8I6AE33_RAT	Wdr37	WD repeat domain 37	1	IIALPHDNR	IIALPHDNR	2	IIALPHDNR2	12830.8	9189.15	10492.2
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	IIAMCGDYYIGGR	IIAMC(UniMod:4)GDYYIGGR	2	IIAMC(UniMod:4)GDYYIGGR2	7204.67	6541.84	5784.22
A0A8I5ZLD3	A0A8I5ZLD3	A0A8I5ZLD3_RAT	Abi2	Abl-interactor 2	1	IIAPANLER	IIAPANLER	2	IIAPANLER2	16850.1	9918.92	17312.5
A0A8I5ZLD3	A0A8I5ZLD3	A0A8I5ZLD3_RAT	Abi2	Abl-interactor 2	1	IIAPANLERPVR	IIAPANLERPVR	3	IIAPANLERPVR3	195452	157874	174334
Q9QZM5	Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	1	IIAPANMER	IIAPANMER	2	IIAPANMER2	46202.3	23830.2	26386.4
Q9QZM5	Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	1	IIAPANMERPVR	IIAPANMERPVR	3	IIAPANMERPVR3	584506	573130	558179
P68136	P60711;P63259;A0A8I5Y704;D3ZRN3;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	IIAPPER	IIAPPER	1	IIAPPER1	7656.45		
P68136	P60711;P63259;A0A8I5Y704;D3ZRN3;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	IIAPPER	IIAPPER	2	IIAPPER2	4.53797e+07	3.6315e+07	3.98355e+07
P68136	P60711;P63259;A0A8I5Y704;D3ZRN3;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	IIAPPERK	IIAPPERK	2	IIAPPERK2	3.10205e+06	2.73583e+06	2.72392e+06
A0A0G2K2G7	A0A0G2K2G7	A0A0G2K2G7_RAT	Anks1a	Ankyrin repeat and sterile alpha motif domain containing 1A	1	IIASLADR	IIASLADR	2	IIASLADR2	30681.9	24136.6	33105
Q6AY23	Q6AY23	P5CR2_RAT	Pycr2	Pyrroline-5-carboxylate reductase 2	1	IIASSPEMDLPTVSALR	IIASSPEMDLPTVSALR	2	IIASSPEMDLPTVSALR2	6656.23	7026.13	11330.4
Q6AY23	Q6AY23	P5CR2_RAT	Pycr2	Pyrroline-5-carboxylate reductase 2	1	IIASSPEMDLPTVSALR	IIASSPEMDLPTVSALR	3	IIASSPEMDLPTVSALR3	5091.02	3084.6	
Q6AY23	Q6AY23	P5CR2_RAT	Pycr2	Pyrroline-5-carboxylate reductase 2	1	IIASSPEMDLPTVSALRK	IIASSPEMDLPTVSALRK	3	IIASSPEMDLPTVSALRK3	9999.72	4632.86	4768.78
Q62720	Q62720	ZNT1_RAT	Slc30a1	Proton-coupled zinc antiporter SLC30A1	1	IIATAHIK	IIATAHIK	2	IIATAHIK2	35366.3	39539.2	30058.6
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	IIATCGELLR	IIATC(UniMod:4)GELLR	2	IIATC(UniMod:4)GELLR2	20802.6	21392.7	16419.3
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	IIATTLSR	IIATTLSR	2	IIATTLSR2	64010.4	43656.7	56622.2
A0A8I6A502	A0A8I6A502	A0A8I6A502_RAT	Tns3	Tensin 3	1	IIAVSFPASCSEESYLHSLQEVTR	IIAVSFPASC(UniMod:4)SEESYLHSLQEVTR	3	IIAVSFPASC(UniMod:4)SEESYLHSLQEVTR3	7311.41	8820.23	9794.63
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	IIAVSFPSTANEENFR	IIAVSFPSTANEENFR	2	IIAVSFPSTANEENFR2	19856.3	18954.4	23318.3
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	IIAVSFPSTANEENFR	IIAVSFPSTANEENFR	3	IIAVSFPSTANEENFR3	3740.8		3462.81
G3V6K6	G3V6K6	G3V6K6_RAT	Egfr	Receptor protein-tyrosine kinase	1	IICAQQCSR	IIC(UniMod:4)AQQC(UniMod:4)SR	2	IIC(UniMod:4)AQQC(UniMod:4)SR2	32540.4	31024.6	20415.7
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	IICDLVEEK	IIC(UniMod:4)DLVEEK	2	IIC(UniMod:4)DLVEEK2	414597	537551	446452
A0A0G2K1A2	A0A0G2K1A2	A0A0G2K1A2_RAT	Mpo	Myeloperoxidase	1	IICDNTGITTVSK	IIC(UniMod:4)DNTGITTVSK	2	IIC(UniMod:4)DNTGITTVSK2	30390.6	15070.4	21170.2
P50398	P50398	GDIA_RAT	Gdi1	Rab GDP dissociation inhibitor alpha	1	IICILSHPIK	IIC(UniMod:4)ILSHPIK	2	IIC(UniMod:4)ILSHPIK2	3583.75	3409.84	621.046
P50398	P50398	GDIA_RAT	Gdi1	Rab GDP dissociation inhibitor alpha	1	IICILSHPIK	IIC(UniMod:4)ILSHPIK	3	IIC(UniMod:4)ILSHPIK3	61699.6	53420.1	39388.4
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	IICPGLR	IIC(UniMod:4)PGLR	2	IIC(UniMod:4)PGLR2	528206	372949	486311
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	IICPWPK	IIC(UniMod:4)PWPK	1	IIC(UniMod:4)PWPK1	191480	217025	109779
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	IICPWPK	IIC(UniMod:4)PWPK	2	IIC(UniMod:4)PWPK2	2.29168e+07	2.36331e+07	2.41013e+07
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	IICSCTEGYQLAEDQK	IIC(UniMod:4)SC(UniMod:4)TEGYQLAEDQK	2	IIC(UniMod:4)SC(UniMod:4)TEGYQLAEDQK2	21760.6	18224.3	17552.3
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	IICSCTEGYQLAEDQK	IIC(UniMod:4)SC(UniMod:4)TEGYQLAEDQK	3	IIC(UniMod:4)SC(UniMod:4)TEGYQLAEDQK3	266275	303578	251072
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	IICSCTEGYQLAEDQKSCEPAVPFPCGR	IIC(UniMod:4)SC(UniMod:4)TEGYQLAEDQKSC(UniMod:4)EPAVPFPC(UniMod:4)GR	4	IIC(UniMod:4)SC(UniMod:4)TEGYQLAEDQKSC(UniMod:4)EPAVPFPC(UniMod:4)GR4	20432.1	40380	
P11240	P11240;A0A8I6A0L0	COX5A_RAT	Cox5a	Cytochrome c oxidase subunit 5A, mitochondrial	0	IIDAALR	IIDAALR	2	IIDAALR2	1.14072e+06	1.3339e+06	1.15316e+06
P38062	P38062	MAP2_RAT	Metap2	Methionine aminopeptidase 2	1	IIDCAFTVTFNPK	IIDC(UniMod:4)AFTVTFNPK	2	IIDC(UniMod:4)AFTVTFNPK2	8801.01	7495.74	13494.1
Q27W02	Q27W02;F1M0X6	MGN_RAT	Magoh	Protein mago nashi homolog	0	IIDDSEITK	IIDDSEITK	2	IIDDSEITK2	45969.1	36030	38233.3
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	IIDEDFELTER	IIDEDFELTER	2	IIDEDFELTER2	69064.5	41039.9	48312.6
A0A8I5ZSB0	A0A8I5ZSB0	A0A8I5ZSB0_RAT	Igtp	Interferon gamma induced GTPase	1	IIDENNLQR	IIDENNLQR	2	IIDENNLQR2	19269.4	25236.2	8008.77
D3ZSB7	D3ZSB7	D3ZSB7_RAT	Rps6ka4	Ribosomal protein S6 kinase	1	IIDFGFAR	IIDFGFAR	2	IIDFGFAR2	9085.86	6703.41	8247.85
B0K015	B0K015	B0K015_RAT	Commd8	COMM domain containing 8	1	IIDGICGR	IIDGIC(UniMod:4)GR	2	IIDGIC(UniMod:4)GR2	21074.8	14534.2	18450.1
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	IIDGVPVEITEK	IIDGVPVEITEK	2	IIDGVPVEITEK2	105034	92073.1	88873.8
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	IIDIIDTTGSGDVNTATEVEPK	IIDIIDTTGSGDVNTATEVEPK	3	IIDIIDTTGSGDVNTATEVEPK3	12492.9	18274.4	12603.3
Q9QY78	Q9QY78;A0A8I6ANR6	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	0	IIDLGYAK	IIDLGYAK	2	IIDLGYAK2	78314.3	86743	99661.1
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	IIDLIIPR	IIDLIIPR	2	IIDLIIPR2	65400.4	75525.8	71270.1
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	IIDSGPQLSGSLDYNVVHSLYNK	IIDSGPQLSGSLDYNVVHSLYNK	3	IIDSGPQLSGSLDYNVVHSLYNK3	7272.08	8632.73	11774.1
G3V7V5	G3V7V5	G3V7V5_RAT	Fkbp11	peptidylprolyl isomerase	1	IIDTSLTRDPLVIELGQK	IIDTSLTRDPLVIELGQK	3	IIDTSLTRDPLVIELGQK3	33173.4	35625.2	39010.9
Q5U1X1	Q5U1X1	ORN_RAT	Rexo2	Oligoribonuclease, mitochondrial	1	IIDVSTVK	IIDVSTVK	2	IIDVSTVK2	218330	198082	193082
P62243	P62243;M0R7Q5	RS8_RAT	Rps8	Small ribosomal subunit protein eS8	0	IIDVVYNASNNELVR	IIDVVYNASNNELVR	2	IIDVVYNASNNELVR2	22105.2	23884.9	17041.6
P62243	P62243;M0R7Q5	RS8_RAT	Rps8	Small ribosomal subunit protein eS8	0	IIDVVYNASNNELVR	IIDVVYNASNNELVR	3	IIDVVYNASNNELVR3	7056.87	8671.4	8038.38
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	IIEAAHQVGEDEISLSTLGR	IIEAAHQVGEDEISLSTLGR	3	IIEAAHQVGEDEISLSTLGR3	15022.3	12768.9	12583.7
B1WBY5	B1WBY5	B1WBY5_RAT	Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	1	IIEAEESR	IIEAEESR	2	IIEAEESR2	74370.8	82469.5	74734.9
Q32Q54	Q32Q54	Q32Q54_RAT	Uqcc1	Ubiquinol-cytochrome c reductase complex assembly factor 1	1	IIEAMGFTGPLK	IIEAMGFTGPLK	2	IIEAMGFTGPLK2	9088.04	2701.13	8692.25
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	IIECIIEESQK	IIEC(UniMod:4)IIEESQK	2	IIEC(UniMod:4)IIEESQK2	127040	132100	102093
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	IIECIIEESQK	IIEC(UniMod:4)IIEESQK	3	IIEC(UniMod:4)IIEESQK3	8981.21	10394.8	7278.89
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	IIEDCSNSDETVK	IIEDC(UniMod:4)SNSDETVK	2	IIEDC(UniMod:4)SNSDETVK2	67558.9	64043	56022.4
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	IIEDPAQSSGFHPSGSVVAVGTLTGR	IIEDPAQSSGFHPSGSVVAVGTLTGR	3	IIEDPAQSSGFHPSGSVVAVGTLTGR3	195665	183314	213571
Q5I0C3	Q5I0C3	MCCA_RAT	Mccc1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	1	IIEEAPAPGIDPEVR	IIEEAPAPGIDPEVR	2	IIEEAPAPGIDPEVR2	68425.1	53106.7	67760.7
Q5I0C3	Q5I0C3	MCCA_RAT	Mccc1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	1	IIEEAPAPGIDPEVR	IIEEAPAPGIDPEVR	3	IIEEAPAPGIDPEVR3		4127.99	
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	IIEELDVKPDGTR	IIEELDVKPDGTR	3	IIEELDVKPDGTR3	25573.2	29289.9	28211.1
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	IIEETLALK	IIEETLALK	2	IIEETLALK2	748505	669513	763289
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	IIEFVPTK	IIEFVPTK	2	IIEFVPTK2	31387	29534.7	25776.6
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	IIELPNNR	IIELPNNR	2	IIELPNNR2	26830.4	20022	23379.1
Q63377	Q63377	AT1B3_RAT	Atp1b3	Sodium/potassium-transporting ATPase subunit beta-3	1	IIELVPDGAPYITCITK	IIELVPDGAPYITC(UniMod:4)ITK	2	IIELVPDGAPYITC(UniMod:4)ITK2	124021	128282	142307
Q63377	Q63377	AT1B3_RAT	Atp1b3	Sodium/potassium-transporting ATPase subunit beta-3	1	IIELVPDGAPYITCITK	IIELVPDGAPYITC(UniMod:4)ITK	3	IIELVPDGAPYITC(UniMod:4)ITK3	18272.4	24192.3	24093.7
A0A8J8YRV3	A0A8J8YRV3	A0A8J8YRV3_RAT	Drg1	Developmentally regulated GTP binding protein 1	1	IIENELEGFGIR	IIENELEGFGIR	2	IIENELEGFGIR2	31381.3	24892.6	31343.7
Q5U1X1	Q5U1X1	ORN_RAT	Rexo2	Oligoribonuclease, mitochondrial	1	IIENGENEKPVS	IIENGENEKPVS	2	IIENGENEKPVS2	19598.7	13315.3	14658.1
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	IIENLHDVAYK	IIENLHDVAYK	2	IIENLHDVAYK2	40673.7	29643.4	35454.1
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	IIENLHDVAYK	IIENLHDVAYK	3	IIENLHDVAYK3	636079	671513	653329
Q641Y2	Q641Y2	NDUS2_RAT	Ndufs2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	1	IIEQCLNK	IIEQC(UniMod:4)LNK	2	IIEQC(UniMod:4)LNK2	118488	133988	106406
Q63616	Q63616	VP33B_RAT	Vps33b	Vacuolar protein sorting-associated protein 33B	1	IIEQVLDRR	IIEQVLDRR	3	IIEQVLDRR3	44538	31626.8	35201.4
B0BN18	B0BN18	PFD2_RAT	Pfdn2	Prefoldin subunit 2	1	IIETLSQQLQAK	IIETLSQQLQAK	2	IIETLSQQLQAK2	54857.7	53866.7	59903.4
A0FKI7	A0FKI7;A0A8I5Y5I3	ACBD5_RAT	Acbd5	Acyl-CoA-binding domain-containing protein 5	0	IIETMPMTEK	IIETMPMTEK	2	IIETMPMTEK2	8429.47	3622.22	4262.98
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	IIETPGIR	IIETPGIR	2	IIETPGIR2	36132.5	24074.5	21236.2
P61621	A0A8I6AA70;P61621	S61A1_RAT	Sec61a1	Protein transport protein Sec61 subunit alpha isoform 1	0	IIEVGDTPK	IIEVGDTPK	2	IIEVGDTPK2	95676.5	80320.9	79976.3
P61621	A0A8I6AA70;P61621	S61A1_RAT	Sec61a1	Protein transport protein Sec61 subunit alpha isoform 1	0	IIEVGDTPKDR	IIEVGDTPKDR	2	IIEVGDTPKDR2	4742.45	1681.74	
P61621	A0A8I6AA70;P61621	S61A1_RAT	Sec61a1	Protein transport protein Sec61 subunit alpha isoform 1	0	IIEVGDTPKDR	IIEVGDTPKDR	3	IIEVGDTPKDR3	52731.1	42755	59042.4
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	IIEVHVDK	IIEVHVDK	2	IIEVHVDK2	29685.5	20400.2	16916.5
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	IIEVSGQK	IIEVSGQK	1	IIEVSGQK1	1549.51	826.837	
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	IIEVSGQK	IIEVSGQK	2	IIEVSGQK2	896731	884998	934014
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	IIEVVDAIMTTAQSHQR	IIEVVDAIMTTAQSHQR	3	IIEVVDAIMTTAQSHQR3	78186.6	83894	72582.5
Q499P8	Q499P8	RUSF1_RAT	Rusf1	RUS family member 1	1	IIFAWWK	IIFAWWK	2	IIFAWWK2	9335.21	11119.9	10395.6
P62959	A0A8I6AVX1;P62959	HINT1_RAT	Hint1	Adenosine 5'-monophosphoramidase HINT1	0	IIFEDDR	IIFEDDR	2	IIFEDDR2	12949.4	11999.3	
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	IIFPAAEDKDQDLITIIGK	IIFPAAEDKDQDLITIIGK	3	IIFPAAEDKDQDLITIIGK3	38168.1	28016.3	33628.5
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	IIFSPVAPK	IIFSPVAPK	2	IIFSPVAPK2	27125	22780.3	21601
Q5RJK5	D3ZRS6;A0A8I5ZM96;Q5RJK5	Q5RJK5_RAT	Cbx3	Chromobox 3	0	IIGATDSSGELMFLMK	IIGATDSSGELMFLMK	2	IIGATDSSGELMFLMK2	4956.29	8756.35	
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	IIGAVDQIQLTQAQLEER	IIGAVDQIQLTQAQLEER	3	IIGAVDQIQLTQAQLEER3	76038.1	64236.6	78362.5
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	IIGDAYLK	IIGDAYLK	2	IIGDAYLK2		56213.3	
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	IIGDSAFLLILK	IIGDSAFLLILK	2	IIGDSAFLLILK2	24230	24845.9	12025.6
Q4V7C6	Q4V7C6	GUAA_RAT	Gmps	GMP synthase [glutamine-hydrolyzing]	1	IIGDTFVK	IIGDTFVK	2	IIGDTFVK2	204527	228687	224848
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	IIGEGDLSGESCVMTGDGNQDK	IIGEGDLSGESC(UniMod:4)VMTGDGNQDK	3	IIGEGDLSGESC(UniMod:4)VMTGDGNQDK3	5181.72	4394.46	5683.72
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	IIGEGDLSGESCVMTGDGNQDKR	IIGEGDLSGESC(UniMod:4)VMTGDGNQDKR	3	IIGEGDLSGESC(UniMod:4)VMTGDGNQDKR3	53308.8	52762	54141.3
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	IIGFGSALLEEVDPNPANFVGAGIIHTK	IIGFGSALLEEVDPNPANFVGAGIIHTK	3	IIGFGSALLEEVDPNPANFVGAGIIHTK3	10082.4	12036.4	7242.36
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	IIGFGSALLEEVDPNPANFVGAGIIHTK	IIGFGSALLEEVDPNPANFVGAGIIHTK	4	IIGFGSALLEEVDPNPANFVGAGIIHTK4	6118.8		8009.7
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	IIGFSPEEVESIHR	IIGFSPEEVESIHR	3	IIGFSPEEVESIHR3	65537.6	88016.2	70736.8
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	IIGGSMDAK	IIGGSMDAK	1	IIGGSMDAK1	12855.6	11424.3	5667.03
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	IIGGSMDAK	IIGGSMDAK	2	IIGGSMDAK2	1.52877e+06	1.43247e+06	1.33472e+06
Q6AYC2	Q6AYC2	IRGM_RAT	Irgm	Immunity-related GTPase family M protein	1	IIGHEEDASAPTGVVR	IIGHEEDASAPTGVVR	3	IIGHEEDASAPTGVVR3	15748	16811.4	27515.8
P12711	P41682;P12711	ADHX_RAT	Adh5	Alcohol dehydrogenase class-3	0	IIGIDINK	IIGIDINK	2	IIGIDINK2		17126.1	15337.1
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	IIGLDQVAGMSETALPGAFK	IIGLDQVAGMSETALPGAFK	3	IIGLDQVAGMSETALPGAFK3	875820	1.4508e+06	1.41088e+06
G3V6W5	G3V6W5	G3V6W5_RAT	Ifih1	RNA helicase	1	IIGLSGDTQLK	IIGLSGDTQLK	2	IIGLSGDTQLK2	54176.4	47347.5	54112.7
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	IIGNLLYYR	IIGNLLYYR	2	IIGNLLYYR2	105666	78924.8	89364.4
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	IIGPLEDSELFNQDDFHLLENIILK	IIGPLEDSELFNQDDFHLLENIILK	3	IIGPLEDSELFNQDDFHLLENIILK3		3457.93	3074.22
P47820	P47820	ACE_RAT	Ace	Angiotensin-converting enzyme	1	IIGSVQTLGPANLPLTQR	IIGSVQTLGPANLPLTQR	2	IIGSVQTLGPANLPLTQR2	3383.87	2846.96	1816.97
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	IIGVHQEDELLECLSPATSR	IIGVHQEDELLEC(UniMod:4)LSPATSR	3	IIGVHQEDELLEC(UniMod:4)LSPATSR3	21779.1	23593.8	31025.8
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	IIGVNDIPLHCVDQIYGVFDEK	IIGVNDIPLHC(UniMod:4)VDQIYGVFDEK	3	IIGVNDIPLHC(UniMod:4)VDQIYGVFDEK3	29568.8	22035.4	59936.9
P33436	P33436	MMP2_RAT	Mmp2	72 kDa type IV collagenase	1	IIGYTPDLDPETVDDAFAR	IIGYTPDLDPETVDDAFAR	3	IIGYTPDLDPETVDDAFAR3	16822.1	11134.4	8758.58
P08753	P08753	GNAI3_RAT	Gnai3	Guanine nucleotide-binding protein G(i) subunit alpha-3	1	IIHEDGYSEDECK	IIHEDGYSEDEC(UniMod:4)K	2	IIHEDGYSEDEC(UniMod:4)K2	34103.3	20005.8	28301.7
P08753	P08753	GNAI3_RAT	Gnai3	Guanine nucleotide-binding protein G(i) subunit alpha-3	1	IIHEDGYSEDECK	IIHEDGYSEDEC(UniMod:4)K	3	IIHEDGYSEDEC(UniMod:4)K3	61634.9	60955.4	64617.5
P04897	P04897	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	1	IIHEDGYSEEECR	IIHEDGYSEEEC(UniMod:4)R	2	IIHEDGYSEEEC(UniMod:4)R2	70999.7	59359.8	65286.2
P04897	P04897	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	1	IIHEDGYSEEECR	IIHEDGYSEEEC(UniMod:4)R	3	IIHEDGYSEEEC(UniMod:4)R3	14022.2	18144.3	10976.8
P04897	P04897	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	1	IIHEDGYSEEECRQYR	IIHEDGYSEEEC(UniMod:4)RQYR	3	IIHEDGYSEEEC(UniMod:4)RQYR3	5830.74	5209.22	
P04897	P04897	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	1	IIHEDGYSEEECRQYR	IIHEDGYSEEEC(UniMod:4)RQYR	4	IIHEDGYSEEEC(UniMod:4)RQYR4	20519	16424.5	30900.4
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	IIHGQDFDQR	IIHGQDFDQR	2	IIHGQDFDQR2	50690	51636.4	40478.7
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	IIHGQDFDQR	IIHGQDFDQR	3	IIHGQDFDQR3	93914.5	95947.3	98109.8
P82471	P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	1	IIHGSGYSDEDK	IIHGSGYSDEDK	3	IIHGSGYSDEDK3		76014.6	82411.6
P82471	P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	1	IIHGSGYSDEDKR	IIHGSGYSDEDKR	2	IIHGSGYSDEDKR2	22491.3		9737.69
P82471	P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	1	IIHGSGYSDEDKR	IIHGSGYSDEDKR	3	IIHGSGYSDEDKR3			4267.16
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	IIHHGVNQGGSEAGR	IIHHGVNQGGSEAGR	2	IIHHGVNQGGSEAGR2			903.84
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	IIHHGVNQGGSEAGR	IIHHGVNQGGSEAGR	3	IIHHGVNQGGSEAGR3			30192.5
P0C1S9	P0C1S9	DGLB_RAT	Daglb	Diacylglycerol lipase-beta	1	IIHLEEEGGSGR	IIHLEEEGGSGR	2	IIHLEEEGGSGR2	7454.59	8193.42	13745
P0C1S9	P0C1S9	DGLB_RAT	Daglb	Diacylglycerol lipase-beta	1	IIHLEEEGGSGR	IIHLEEEGGSGR	3	IIHLEEEGGSGR3	33322.4	21879.9	28936.9
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	IIHSGGFNLEACK	IIHSGGFNLEAC(UniMod:4)K	2	IIHSGGFNLEAC(UniMod:4)K2	31996.9	30087.7	10542.7
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	IIHSGGFNLEACK	IIHSGGFNLEAC(UniMod:4)K	3	IIHSGGFNLEAC(UniMod:4)K3	266376	229340	272535
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	IIHSSVQK	IIHSSVQK	1	IIHSSVQK1			2416.26
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	IIHSSVQK	IIHSSVQK	2	IIHSSVQK2			3587.57
Q4KLN3	Q4KLN3	Q4KLN3_RAT	Srpk1	SRSF protein kinase 1	1	IIHTDIKPENILLSVNEQYIR	IIHTDIKPENILLSVNEQYIR	3	IIHTDIKPENILLSVNEQYIR3	2321.52		1872.42
Q4KLN3	Q4KLN3	Q4KLN3_RAT	Srpk1	SRSF protein kinase 1	1	IIHTDIKPENILLSVNEQYIR	IIHTDIKPENILLSVNEQYIR	4	IIHTDIKPENILLSVNEQYIR4	13292.1	9295.98	10982.5
B1WBT4	B1WBT4	B1WBT4_RAT	Srpk2	SRSF protein kinase 2	1	IIHTDIKPENILMCVDGAYVR	IIHTDIKPENILMC(UniMod:4)VDGAYVR	3	IIHTDIKPENILMC(UniMod:4)VDGAYVR3	7417.88	5514.89	5855.04
Q05096	Q05096	MYO1B_RAT	Myo1b	Unconventional myosin-Ib	1	IIIAEVVNK	IIIAEVVNK	2	IIIAEVVNK2	6422.66	11771.8	5550.32
A0A8I5YBR2	A0A8I5YBR2	A0A8I5YBR2_RAT	Cops6	COP9 signalosome complex subunit 6	1	IIIDKEYYYTK	IIIDKEYYYTK	2	IIIDKEYYYTK2	7118.13	6801.48	6193.32
A0A8I5YBR2	A0A8I5YBR2	A0A8I5YBR2_RAT	Cops6	COP9 signalosome complex subunit 6	1	IIIDKEYYYTK	IIIDKEYYYTK	3	IIIDKEYYYTK3	81773.7	105713	97490.9
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	IIIDLFK	IIIDLFK	1	IIIDLFK1	402950	364179	301754
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	IIIDLFK	IIIDLFK	2	IIIDLFK2	3.23171e+07	2.99369e+07	2.79737e+07
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	IIINDDLTVAFNELK	IIINDDLTVAFNELK	2	IIINDDLTVAFNELK2	6716.64	5806.32	8345.59
A0A0G2K0I6	A0A0G2K0I6	A0A0G2K0I6_RAT	Cdh5	Cadherin 5	1	IIINVLDVDEPPVFQR	IIINVLDVDEPPVFQR	2	IIINVLDVDEPPVFQR2	32276.1	21194.9	27658.8
A0A0G2K0I6	A0A0G2K0I6	A0A0G2K0I6_RAT	Cdh5	Cadherin 5	1	IIINVLDVDEPPVFQR	IIINVLDVDEPPVFQR	3	IIINVLDVDEPPVFQR3	43500.1	48598.1	41495
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	IIIPEIQK	IIIPEIQK	2	IIIPEIQK2	51456.5	45511.3	42606.9
A0A8I6A691	A0A8I6A691	A0A8I6A691_RAT	Hspa12a	Heat shock protein family A (Hsp70) member 12A	1	IIIPQDVGLTILK	IIIPQDVGLTILK	2	IIIPQDVGLTILK2	3966.38	1286.19	
Q7TNA8	Q7TNA8	Q7TNA8_RAT	Ldhal6b	L-lactate dehydrogenase	1	IIIVSNPVDILTYVAWK	IIIVSNPVDILTYVAWK	2	IIIVSNPVDILTYVAWK2	64337.2		
Q7TNA8	Q7TNA8	Q7TNA8_RAT	Ldhal6b	L-lactate dehydrogenase	1	IIIVSNPVDILTYVAWK	IIIVSNPVDILTYVAWK	3	IIIVSNPVDILTYVAWK3	20223.1		
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	IIKPCNHVLSLSFPIR	IIKPC(UniMod:4)NHVLSLSFPIR	3	IIKPC(UniMod:4)NHVLSLSFPIR3	61306.7	34636.4	56055
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	IIKPCNHVLSLSFPIR	IIKPC(UniMod:4)NHVLSLSFPIR	4	IIKPC(UniMod:4)NHVLSLSFPIR4	104375	93017	114259
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	IIKPCNHVLSLSFPIRR	IIKPC(UniMod:4)NHVLSLSFPIRR	4	IIKPC(UniMod:4)NHVLSLSFPIRR4	11323	14157.4	21559.6
A0A8I5ZQ24	A0A8I5ZQ24	A0A8I5ZQ24_RAT	Atp6v1h	V-type proton ATPase subunit H	1	IILAAFR	IILAAFR	2	IILAAFR2	20860.8	15415.6	22297.3
F1M3G7	F1M3G7	AKP13_RAT	Akap13	A-kinase anchor protein 13	1	IILAVHRPEPAPEMPDTK	IILAVHRPEPAPEMPDTK	4	IILAVHRPEPAPEMPDTK4	7122.07	2214.42	6080.64
P08541	F1M3E3;Q62789;P08541	UD2B2_RAT	Ugt2b	UDP-glucuronosyltransferase 2B2	0	IILDELVQR	IILDELVQR	2	IILDELVQR2	15024.3	21243.9	18440.2
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	IILDHEK	IILDHEK	2	IILDHEK2	12261.9	10072.3	
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	IILDHEKEWK	IILDHEKEWK	3	IILDHEKEWK3	14104.7	11127.3	31404.9
P61980	P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	IILDLISESPIK	IILDLISESPIK	2	IILDLISESPIK2	191832	199179	167920
Q62639	Q62639	RHEB_RAT	Rheb	GTP-binding protein Rheb	1	IILEAEK	IILEAEK	2	IILEAEK2	248220	211983	250628
P36511	P36511	UDB15_RAT	Ugt2b15	UDP-glucuronosyltransferase 2B15	1	IILEELVQK	IILEELVQK	2	IILEELVQK2	7473.58	3284.88	9893.46
Q3MIE7	Q3MIE7	Q3MIE7_RAT	Commd9	COMM domain containing 9	1	IILEHISTWR	IILEHISTWR	3	IILEHISTWR3	3894.71	3950.07	2297.54
A0A8I6A8Q1	A0A8I6A8Q1	A0A8I6A8Q1_RAT	A2ml1	Alpha-2-macroglobulin-like 1	1	IILEPKPLPCDQEK	IILEPKPLPC(UniMod:4)DQEK	3	IILEPKPLPC(UniMod:4)DQEK3	30080.9	27214.1	36898.1
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	IILFTEDPR	IILFTEDPR	2	IILFTEDPR2	33874.9	54065.6	41635.6
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	IILGGSMAR	IILGGSMAR	2	IILGGSMAR2	103766	116560	107631
Q5EGY4	Q5EGY4	YKT6_RAT	Ykt6	Synaptobrevin homolog YKT6	1	IILHNTMESLLER	IILHNTMESLLER	2	IILHNTMESLLER2	7714.26	11038.8	13815
Q5EGY4	Q5EGY4	YKT6_RAT	Ykt6	Synaptobrevin homolog YKT6	1	IILHNTMESLLER	IILHNTMESLLER	3	IILHNTMESLLER3	42453.7	39621.8	41804.6
P10760	P10760	SAHH_RAT	Ahcy	Adenosylhomocysteinase	1	IILLAEGR	IILLAEGR	2	IILLAEGR2	50584.4	41124.7	54110.5
Q8R491	Q8R491;Q641Z6;Q8R3Z7	EHD3_RAT	Ehd3	EH domain-containing protein 3	0	IILLFDAHK	IILLFDAHK	2	IILLFDAHK2	16876.8	8247.26	8639.9
Q99P75	Q99P75	RAB9A_RAT	Rab9a	Ras-related protein Rab-9A	1	IILLGDGGVGK	IILLGDGGVGK	2	IILLGDGGVGK2	38440.8	37609.5	34914.2
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	IILLKPIIK	IILLKPIIK	2	IILLKPIIK2	15030.1	19761.1	13414.5
Q9Z1N3	Q9Z1N3	MYO9A_RAT	Myo9a	Unconventional myosin-IXa	1	IILLQSIYR	IILLQSIYR	2	IILLQSIYR2	4643.54	4909.25	2389.97
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	IILNSHSPAGSAAISQQDFHPK	IILNSHSPAGSAAISQQDFHPK	3	IILNSHSPAGSAAISQQDFHPK3	6805.14	6260.75	4506.72
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	IILNSHSPAGSAAISQQDFHPK	IILNSHSPAGSAAISQQDFHPK	4	IILNSHSPAGSAAISQQDFHPK4	20027.7	17459.8	21896.8
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	IILPEGAK	IILPEGAK	2	IILPEGAK2	644526	649255	695742
A0A8I5ZUS1	A0A8I5ZUS1	A0A8I5ZUS1_RAT	Map3k4	Mitogen activated protein kinase kinase kinase 4	1	IILQLLNAATGK	IILQLLNAATGK	2	IILQLLNAATGK2	5145.51	7958.48	2851.1
A0A8I6AAF1	A0A8I6AAF1	A0A8I6AAF1_RAT	Card19	Caspase recruitment domain family, member 19	1	IILQLNR	IILQLNR	2	IILQLNR2	110947	105002	86633.6
O88277	O88277	FAT2_RAT	Fat2	Protocadherin Fat 2	1	IILTDENDNAPQFK	IILTDENDNAPQFK	2	IILTDENDNAPQFK2	3862.18	3376.05	3041.34
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	IILWDHDLNLER	IILWDHDLNLER	2	IILWDHDLNLER2	11531.3	10205.1	6245.1
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	IILWDHDLNLER	IILWDHDLNLER	3	IILWDHDLNLER3	164731	173321	151223
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	IIMAEPLEKPLTK	IIMAEPLEKPLTK	3	IIMAEPLEKPLTK3	85425.5	97139.6	89368.5
G3V6G7	G3V6G7	G3V6G7_RAT	Pnpt1	polyribonucleotide nucleotidyltransferase	1	IIMEAIQQATVAK	IIMEAIQQATVAK	2	IIMEAIQQATVAK2	1895.65		3215.11
Q9ES53	Q9ES53	UFD1_RAT	Ufd1	Ubiquitin recognition factor in ER-associated degradation protein 1	1	IIMPPSALDQLSR	IIMPPSALDQLSR	2	IIMPPSALDQLSR2	82626	62267.3	80783.1
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	IIMSVLNER	IIMSVLNER	2	IIMSVLNER2	120305	122215	127157
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	IIMTASASGIYGNFGQANYSAAK	IIMTASASGIYGNFGQANYSAAK	3	IIMTASASGIYGNFGQANYSAAK3	27342.5	24443	30215
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	IIMTLAEDLLCSAAQNSR	IIMTLAEDLLC(UniMod:4)SAAQNSR	3	IIMTLAEDLLC(UniMod:4)SAAQNSR3	33119.3	23995.6	16673
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	IINADSEDPK	IINADSEDPK	2	IINADSEDPK2	294212	257099	293224
P61023	A0A8I6AT96;P61023;A0A8I6AI64	CHP1_RAT	Chp1	Calcineurin B homologous protein 1	0	IINAFFSEGEDQVNFR	IINAFFSEGEDQVNFR	2	IINAFFSEGEDQVNFR2	2197.64	3747.85	
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	IINDYYPEEDGK	IINDYYPEEDGK	2	IINDYYPEEDGK2	117462	136637	129053
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	IINDYYPEEDGKTK	IINDYYPEEDGKTK	2	IINDYYPEEDGKTK2	3735.7	4294.26	6620.63
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	IINDYYPEEDGKTK	IINDYYPEEDGKTK	3	IINDYYPEEDGKTK3	28812.1	37872.6	35888.2
P20651	P20651	PP2BB_RAT	Ppp3cb	Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform	1	IINEGAAILR	IINEGAAILR	2	IINEGAAILR2	46946.9	42403.5	35833.8
P06761	P06761;P55063;P14659;P63018;M0RCB1	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	0	IINEPTAAAIAYGLDK	IINEPTAAAIAYGLDK	2	IINEPTAAAIAYGLDK2	2.62476e+06	2.51962e+06	2.64016e+06
P06761	P06761;P55063;P14659;P63018;M0RCB1	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	0	IINEPTAAAIAYGLDK	IINEPTAAAIAYGLDK	3	IINEPTAAAIAYGLDK3	853236	876980	851508
P14659	P14659;P63018;M0RCB1	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	0	IINEPTAAAIAYGLDKK	IINEPTAAAIAYGLDKK	2	IINEPTAAAIAYGLDKK2	29170.7	30854.3	30021.4
P14659	P14659;P63018;M0RCB1	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	0	IINEPTAAAIAYGLDKK	IINEPTAAAIAYGLDKK	3	IINEPTAAAIAYGLDKK3	1.78154e+06	1.73993e+06	1.79917e+06
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	IINEPTAAAIAYGLDKR	IINEPTAAAIAYGLDKR	2	IINEPTAAAIAYGLDKR2	9046.26	5741.32	8023.44
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	IINEPTAAAIAYGLDKR	IINEPTAAAIAYGLDKR	3	IINEPTAAAIAYGLDKR3	816904	740596	781683
Q3MHS7	Q3MHS7	Q3MHS7_RAT	Gmds	GDP-mannose 4,6-dehydratase	1	IINEVKPTEIYNLGAQSHVK	IINEVKPTEIYNLGAQSHVK	3	IINEVKPTEIYNLGAQSHVK3	4740.15	3761.92	
Q3MHS7	Q3MHS7	Q3MHS7_RAT	Gmds	GDP-mannose 4,6-dehydratase	1	IINEVKPTEIYNLGAQSHVK	IINEVKPTEIYNLGAQSHVK	4	IINEVKPTEIYNLGAQSHVK4	19309.9	21760.9	17517.9
P0C5H9	P0C5H9	MANF_RAT	Manf	Mesencephalic astrocyte-derived neurotrophic factor	1	IINEVSKPLAHHIPVEK	IINEVSKPLAHHIPVEK	3	IINEVSKPLAHHIPVEK3	11603.7	5585.21	
P0C5H9	P0C5H9	MANF_RAT	Manf	Mesencephalic astrocyte-derived neurotrophic factor	1	IINEVSKPLAHHIPVEK	IINEVSKPLAHHIPVEK	4	IINEVSKPLAHHIPVEK4	33710.4	16438.5	12856.5
A0A0G2K6J6	A0A0G2K6J6	A0A0G2K6J6_RAT	Ipo8	Importin 8	1	IINFAPSLLR	IINFAPSLLR	2	IINFAPSLLR2	7759.26	7588.4	4857.3
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	IINFLYSTVGALDK	IINFLYSTVGALDK	2	IINFLYSTVGALDK2	23238.5	38705.7	37520.8
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	IINFLYSTVGALDK	IINFLYSTVGALDK	3	IINFLYSTVGALDK3		4800.65	3735.34
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	IINGHLDLDNR	IINGHLDLDNR	3	IINGHLDLDNR3	41264.9	60341.2	39408.6
A0A0G2JYN4	A0A0G2JYN4	A0A0G2JYN4_RAT	Ergic2	Endoplasmic reticulum-Golgi intermediate compartment protein	1	IINHAAGSHGVSGIFMK	IINHAAGSHGVSGIFMK	4	IINHAAGSHGVSGIFMK4	17870.5	14958.3	
Q5PPM8	Q5PPM8	PP4P1_RAT	Pip4p1	Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase	1	IINLGPVHPGPLSPEPQPMGVR	IINLGPVHPGPLSPEPQPMGVR	3	IINLGPVHPGPLSPEPQPMGVR3	9639.22	4182.23	10990.4
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	IINTEQYMHSLTWQQALTGLLER	IINTEQYMHSLTWQQALTGLLER	3	IINTEQYMHSLTWQQALTGLLER3	14172.5	19175.1	20578.5
Q641Z6	Q641Z6	EHD1_RAT	Ehd1	EH domain-containing protein 1	1	IINTPEVVR	IINTPEVVR	2	IINTPEVVR2	28659.7	25205.6	24077.5
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	IINYNVEQECNNFLR	IINYNVEQEC(UniMod:4)NNFLR	2	IINYNVEQEC(UniMod:4)NNFLR2	7246.19	11419.9	8204.92
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	IINYNVEQECNNFLR	IINYNVEQEC(UniMod:4)NNFLR	3	IINYNVEQEC(UniMod:4)NNFLR3		2091.36	7047.26
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	IINYRDDDK	IINYRDDDK	3	IINYRDDDK3	27312.7	14624.8	15363
F1LU48	F1LU48	F1LU48_RAT	Ergic1	Endoplasmic reticulum-Golgi intermediate compartment protein	1	IIPAIWFR	IIPAIWFR	2	IIPAIWFR2	56252.3	70547.3	63941.2
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	IIPDVADLK	IIPDVADLK	2	IIPDVADLK2	76151.9	83334.9	81628.9
M0RCP2	M0RCP2;A0A8I6G2U9	M0RCP2_RAT	Sh3pxd2b	SH3 and PX domains 2B	0	IIPFLPGK	IIPFLPGK	2	IIPFLPGK2	24575.1	15433.3	17668.1
P10111	P10111	PPIA_RAT	Ppia	Peptidyl-prolyl cis-trans isomerase A	1	IIPGFMCQGGDFTR	IIPGFMC(UniMod:4)QGGDFTR	2	IIPGFMC(UniMod:4)QGGDFTR2	5.11459e+06	5.02439e+06	4.90977e+06
P10111	P10111	PPIA_RAT	Ppia	Peptidyl-prolyl cis-trans isomerase A	1	IIPGFMCQGGDFTR	IIPGFMC(UniMod:4)QGGDFTR	3	IIPGFMC(UniMod:4)QGGDFTR3	160151	157021	148778
Q62936	Q62936	DLG3_RAT	Dlg3	Disks large homolog 3	1	IIPGGAAAMDGR	IIPGGAAAMDGR	2	IIPGGAAAMDGR2	32853.5	22627.3	26816.2
Q792I0	Q792I0	LIN7C_RAT	Lin7c	Protein lin-7 homolog C	1	IIPGGIADR	IIPGGIADR	2	IIPGGIADR2	125679	75788.9	63691.7
A0A8I5ZVU1	A0A8I5ZVU1	A0A8I5ZVU1_RAT	Uckl1	Uridine-cytidine kinase	1	IIPGIGNFGDR	IIPGIGNFGDR	2	IIPGIGNFGDR2	19535.2	15823.3	21112.3
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	IIPLLTDPK	IIPLLTDPK	2	IIPLLTDPK2	114034	104630	117887
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	IIPLVVK	IIPLVVK	2	IIPLVVK2	297999	331116	247866
G3V6G1	G3V6G1	G3V6G1_RAT	Jchain	Joining chain of multimeric IgA and IgM	1	IIPSPEDPNEDIVER	IIPSPEDPNEDIVER	2	IIPSPEDPNEDIVER2	8.64709e+06	7.40208e+06	8.17349e+06
G3V6G1	G3V6G1	G3V6G1_RAT	Jchain	Joining chain of multimeric IgA and IgM	1	IIPSPEDPNEDIVER	IIPSPEDPNEDIVER	3	IIPSPEDPNEDIVER3	161631	142311	158712
G3V6G1	G3V6G1	G3V6G1_RAT	Jchain	Joining chain of multimeric IgA and IgM	1	IIPSPEDPNEDIVERSIR	IIPSPEDPNEDIVERSIR	3	IIPSPEDPNEDIVERSIR3	4783.3	11449.9	11746.4
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	IIPSPGTHPLLVLVNPK	IIPSPGTHPLLVLVNPK	3	IIPSPGTHPLLVLVNPK3	87052.9	101725	94723.7
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	IIPSTKEEIPSK	IIPSTKEEIPSK	3	IIPSTKEEIPSK3	10485.1	11589.5	
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	IIPYLSFGEVEK	IIPYLSFGEVEK	2	IIPYLSFGEVEK2	99409.3	138522	107282
A0A8I6GIW9	F1LMH8;A0A8I6GIW9	A0A8I6GIW9_RAT	Fbxw11	F-box and WD repeat domain containing 11	0	IIQDIETIESNWR	IIQDIETIESNWR	2	IIQDIETIESNWR2		4226.29	3244.47
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	IIQDPEFR	IIQDPEFR	2	IIQDPEFR2	47786.1	40695.5	34258.9
Q9Z2Q7	Q9Z2Q7	STX8_RAT	Stx8	Syntaxin-8	1	IIQEQDAGLDALSSIISR	IIQEQDAGLDALSSIISR	2	IIQEQDAGLDALSSIISR2	13298.1	14803.2	13407.4
Q9Z2Q7	Q9Z2Q7	STX8_RAT	Stx8	Syntaxin-8	1	IIQEQDAGLDALSSIISR	IIQEQDAGLDALSSIISR	3	IIQEQDAGLDALSSIISR3	16577.1	18136.5	
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	IIQEQQK	IIQEQQK	1	IIQEQQK1	8457.95		13355.8
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	IIQEQQK	IIQEQQK	2	IIQEQQK2	329863		355239
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	IIQEQQKEQSVLFEVPK	IIQEQQKEQSVLFEVPK	3	IIQEQQKEQSVLFEVPK3	5433.93	15332.3	17515.6
A0A8I5ZTH4	A0A0G2K749;A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	0	IIQFIAQER	IIQFIAQER	2	IIQFIAQER2	36787.5	46947.9	41403.1
A0A8I6AB87	A0A8I6AB87	A0A8I6AB87_RAT	Gnpda1	Glucosamine-6-phosphate isomerase	1	IIQFNPGPDK	IIQFNPGPDK	2	IIQFNPGPDK2	21799.5	20612.7	13355.8
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	IIQHCSNYSTQELLR	IIQHC(UniMod:4)SNYSTQELLR	2	IIQHC(UniMod:4)SNYSTQELLR2	3330.12	4837.79	
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	IIQHCSNYSTQELLR	IIQHC(UniMod:4)SNYSTQELLR	3	IIQHC(UniMod:4)SNYSTQELLR3	56982.8	60496.7	52090
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	IIQINTDSLVQEK	IIQINTDSLVQEK	2	IIQINTDSLVQEK2	15045.4	14878.5	15357.3
P51111	P51111	HD_RAT	Htt	Huntingtin	1	IIQLCDGIMASGR	IIQLC(UniMod:4)DGIMASGR	2	IIQLC(UniMod:4)DGIMASGR2	42676.8	39222.4	19662.3
P51111	P51111	HD_RAT	Htt	Huntingtin	1	IIQLCDGIMASGR	IIQLC(UniMod:4)DGIMASGR	3	IIQLC(UniMod:4)DGIMASGR3	3156.13	1801.3	
P19945	D3ZJT4;P19945	RLA0_RAT	Rplp0	Large ribosomal subunit protein uL10	0	IIQLLDDYPK	IIQLLDDYPK	2	IIQLLDDYPK2	151676	147741	168403
O70248	O70248	APBA3_RAT	Apba3	Amyloid-beta A4 precursor protein-binding family A member 3	1	IIQLLTETR	IIQLLTETR	2	IIQLLTETR2		6863.74	5696.73
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	IIQNCFLSNR	IIQNC(UniMod:4)FLSNR	2	IIQNC(UniMod:4)FLSNR2	14931	14039.2	16414.9
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	IIQPLDR	IIQPLDR	2	IIQPLDR2	163174	158651	128411
P11497	E9PSQ0;P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	0	IIQQAGQVWFPDSAFK	IIQQAGQVWFPDSAFK	2	IIQQAGQVWFPDSAFK2	5889.03	6270.95	7698.19
P11497	E9PSQ0;P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	0	IIQQAGQVWFPDSAFK	IIQQAGQVWFPDSAFK	3	IIQQAGQVWFPDSAFK3	3404.82		
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	IIQQDPLR	IIQQDPLR	2	IIQQDPLR2	66262.7	63125.9	80391
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	IIQQIVIQNDK	IIQQIVIQNDK	2	IIQQIVIQNDK2	14971.7	15629.4	16162.8
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	IIQQIVIQNDKGQDPDSTPLENFNIK	IIQQIVIQNDKGQDPDSTPLENFNIK	4	IIQQIVIQNDKGQDPDSTPLENFNIK4	29811.1	27281.4	36498
Q4KLN3	Q4KLN3	Q4KLN3_RAT	Srpk1	SRSF protein kinase 1	1	IIQQVLQGLDYLHTK	IIQQVLQGLDYLHTK	3	IIQQVLQGLDYLHTK3	10477.3	9253.92	6784.01
Q6AYC2	Q6AYC2	IRGM_RAT	Irgm	Immunity-related GTPase family M protein	1	IIQSMGK	IIQSMGK	2	IIQSMGK2	34122.4	32645.2	25748.6
Q5EB77	A0A8I5ZQR4;Q5EB77	RAB18_RAT	Rab18	Ras-related protein Rab-18	0	IIQTPGLWESENQNK	IIQTPGLWESENQNK	2	IIQTPGLWESENQNK2	161104	192157	166267
Q5EB77	A0A8I5ZQR4;Q5EB77	RAB18_RAT	Rab18	Ras-related protein Rab-18	0	IIQTPGLWESENQNK	IIQTPGLWESENQNK	3	IIQTPGLWESENQNK3	9877.69	15672.9	14464
P86411	P86411	RGPA2_RAT	Ralgapa2	Ral GTPase-activating protein subunit alpha-2	1	IIQTVGGGAIQEK	IIQTVGGGAIQEK	2	IIQTVGGGAIQEK2	4618.64	3207.46	3337.31
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	IISAASEGGANVFTVSYFK	IISAASEGGANVFTVSYFK	3	IISAASEGGANVFTVSYFK3	2519.36	813.46	8319.77
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	IISANGCK	IISANGC(UniMod:4)K	2	IISANGC(UniMod:4)K2		200023	
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	IISDNGENEDGEVDDLKHPTK	IISDNGENEDGEVDDLKHPTK	4	IISDNGENEDGEVDDLKHPTK4		3611.83	11165.9
Q9Z1Z1	Q9Z1Z1	E2AK3_RAT	Eif2ak3	Eukaryotic translation initiation factor 2-alpha kinase 3	1	IISDVEEQDVDTVIK	IISDVEEQDVDTVIK	2	IISDVEEQDVDTVIK2	4777.28	4519.15	6581.1
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	IISECSK	IISEC(UniMod:4)SK	2	IISEC(UniMod:4)SK2	282236	309150	
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	IISEDEK	IISEDEK	2	IISEDEK2	69341.1	66287.5	
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	IISEGIWSLIR	IISEGIWSLIR	2	IISEGIWSLIR2	5912.72	4080.81	10038.3
A0A8I6ANR6	A0A8I6ANR6	A0A8I6ANR6_RAT	Chuk	IkappaB kinase	1	IISFLLPYDESLHSLQSR	IISFLLPYDESLHSLQSR	3	IISFLLPYDESLHSLQSR3	5074.6	3175.92	4616.71
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	IISGDNENLFK	IISGDNENLFK	2	IISGDNENLFK2	154449	140236	170619
Q32Q55	Q32Q55	Q32Q55_RAT	Ces2h	Carboxylic ester hydrolase	1	IISGIVDGIFLPR	IISGIVDGIFLPR	2	IISGIVDGIFLPR2	15902.2		10195.4
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	IISHFSQDDLTALVQATENQCNDR	IISHFSQDDLTALVQATENQC(UniMod:4)NDR	3	IISHFSQDDLTALVQATENQC(UniMod:4)NDR3	17880.5	13640.8	11714.1
Q64303	Q64303	PAK2_RAT	Pak2	Serine/threonine-protein kinase PAK 2	1	IISIFSSTEK	IISIFSSTEK	2	IISIFSSTEK2	95156.3	71241.6	86444.7
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	IISLDAWR	IISLDAWR	2	IISLDAWR2	26021.4	18066.9	28010.2
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	IISLDLPVAEVYK	IISLDLPVAEVYK	2	IISLDLPVAEVYK2	25392.1	28334.9	35189
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	IISLDLPVAEVYKK	IISLDLPVAEVYKK	3	IISLDLPVAEVYKK3	20655.9	29958.9	17619.8
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	IISLLSGK	IISLLSGK	2	IISLLSGK2	52372.7	51394.7	51058.6
Q63798	Q63798	PSME2_RAT	Psme2	Proteasome activator complex subunit 2	1	IISLSQLLQEDSLNVADLSSLR	IISLSQLLQEDSLNVADLSSLR	3	IISLSQLLQEDSLNVADLSSLR3	9701.75	6109.76	
A0A0G2K931	A0A0G2K931	A0A0G2K931_RAT	Psat1	Phosphoserine aminotransferase	1	IISNTENLVR	IISNTENLVR	2	IISNTENLVR2	9923.08		
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	IISQCENANSAHFDIALAQEMK	IISQC(UniMod:4)ENANSAHFDIALAQEMK	3	IISQC(UniMod:4)ENANSAHFDIALAQEMK3	10597.1	36997.4	12684.1
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	IISSHLGDEGR	IISSHLGDEGR	3	IISSHLGDEGR3	85750.3	71100.8	109280
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	IISSIEQK	IISSIEQK	1	IISSIEQK1	7680.41	4689.2	10205.6
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	IISSIEQK	IISSIEQK	2	IISSIEQK2	4.76057e+06	4.55754e+06	4.65453e+06
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	IISSIEQKEENK	IISSIEQKEENK	2	IISSIEQKEENK2	189622	195936	156370
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	IISSIEQKEENK	IISSIEQKEENK	3	IISSIEQKEENK3	2.70794e+06	3.1449e+06	3.42933e+06
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	IISSIEQKEENKGGEDK	IISSIEQKEENKGGEDK	3	IISSIEQKEENKGGEDK3	59494.7	63331.6	58959.5
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	IISSIEQKEENKGGEDK	IISSIEQKEENKGGEDK	4	IISSIEQKEENKGGEDK4	30895.2	33748.4	43283.9
D4A7D3	D4A7D3	D4A7D3_RAT	Tbk1	TANK-binding kinase 1	1	IISSNQELIYEGR	IISSNQELIYEGR	2	IISSNQELIYEGR2		2125.66	
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	IISSVIMTEDIK	IISSVIMTEDIK	2	IISSVIMTEDIK2	229434	243575	204399
Q6Q0N0	Q6Q0N0	CSTN1_RAT	Clstn1	Calsyntenin-1	1	IISTITR	IISTITR	2	IISTITR2	24237.7	18155.8	22183.3
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	IISTLPSWR	IISTLPSWR	2	IISTLPSWR2	59939.6	54535	54872.9
P58751	P58751	RELN_RAT	Reln	Reelin	1	IISVELPDDAK	IISVELPDDAK	2	IISVELPDDAK2	211052	211092	241921
A0A0G2JTX7	A0A0G2JTX7;D3ZL10	A0A0G2JTX7_RAT	Col6a5	Collagen type VI alpha 5 chain	0	IISVGVQK	IISVGVQK	2	IISVGVQK2	16305	22372.7	26930.7
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	IISVNSVDLR	IISVNSVDLR	2	IISVNSVDLR2	20259.9	14248.2	17211.4
Q99MS0	Q99MS0	S14L2_RAT	Sec14l2	SEC14-like protein 2	1	IISWQPPEVIQQYLSGGR	IISWQPPEVIQQYLSGGR	3	IISWQPPEVIQQYLSGGR3	2674.8	3663.81	
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	IISYAQGFMLLR	IISYAQGFMLLR	2	IISYAQGFMLLR2	11811.2	16784.4	10294.1
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	IITDPDILK	IITDPDILK	2	IITDPDILK2	34304.2	45490.5	45282.3
Q5PPG7	Q5PPG7	EIF2D_RAT	Eif2d	Eukaryotic translation initiation factor 2D	1	IITDYAK	IITDYAK	2	IITDYAK2	8066.22	12494.8	3167.46
P63329	P63329	PP2BA_RAT	Ppp3ca	Protein phosphatase 3 catalytic subunit alpha	1	IITEGASILR	IITEGASILR	2	IITEGASILR2	346669	354352	296026
F7ELS2	F7ELS2	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	1	IITEGFEAAK	IITEGFEAAK	2	IITEGFEAAK2	532507	555897	588156
F7ELS2	F7ELS2	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	1	IITEGFEAAKEK	IITEGFEAAKEK	3	IITEGFEAAKEK3	6705.27	8112.46	6624.82
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	IITENGDHHVVQLQLK	IITENGDHHVVQLQLK	3	IITENGDHHVVQLQLK3	15043		
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	IITENGDHHVVQLQLK	IITENGDHHVVQLQLK	4	IITENGDHHVVQLQLK4	25031.6	19419.6	20271.4
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	IITGGAAAQDGR	IITGGAAAQDGR	2	IITGGAAAQDGR2	43333.1	44859.8	46203.8
Q63556	Q63556	SPA3M_RAT	Serpina3m	Serine protease inhibitor A3M (Fragment)	1	IITGNALFIDK	IITGNALFIDK	2	IITGNALFIDK2	541593	507060	541261
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	IITGPEIK	IITGPEIK	2	IITGPEIK2	123236	98419.3	79393.4
P61980	P61980	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	1	IITITGTQDQIQNAQYLLQNSVK	IITITGTQDQIQNAQYLLQNSVK	3	IITITGTQDQIQNAQYLLQNSVK3	58751.9	62287	62594.5
Q6AYU2	Q6AYU2	Q6AYU2_RAT	Pcbp2	Poly(rC) binding protein 2	1	IITLAGPTNAIFK	IITLAGPTNAIFK	2	IITLAGPTNAIFK2	83695.4	78411.7	78374.9
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	IITLDETATK	IITLDETATK	2	IITLDETATK2	41282.8	35585	43110.2
Q6AYQ8	Q6AYQ8	FAHD1_RAT	Fahd1	Acylpyruvase FAHD1, mitochondrial	1	IITLEEGDLILTGTPK	IITLEEGDLILTGTPK	2	IITLEEGDLILTGTPK2	11108.6	13988.5	8596.54
Q6AYQ8	Q6AYQ8	FAHD1_RAT	Fahd1	Acylpyruvase FAHD1, mitochondrial	1	IITLEEGDLILTGTPK	IITLEEGDLILTGTPK	3	IITLEEGDLILTGTPK3	6620.15	8662.04	9903.87
Q5FVJ0	Q5FVJ0	RUFY3_RAT	Rufy3	Protein RUFY3	1	IITLQEEMER	IITLQEEMER	2	IITLQEEMER2	13943.9	15908.5	8274.08
A0A8I6AH91	A0A8I6AH91	A0A8I6AH91_RAT	Pcbp1	Poly(rC) binding protein 1	1	IITLTGPTNAIFK	IITLTGPTNAIFK	2	IITLTGPTNAIFK2	111833	79250	92712
Q6AXR4	Q6AXR4	HEXB_RAT	Hexb	Beta-hexosaminidase subunit beta	1	IITNLENAYR	IITNLENAYR	2	IITNLENAYR2	24342.2	22553.4	28761.3
Q64350	Q64350	EI2BE_RAT	Eif2b5	Translation initiation factor eIF-2B subunit epsilon	1	IITSDLYR	IITSDLYR	2	IITSDLYR2	63540.1	41884.4	85178.1
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	IITTDLR	IITTDLR	2	IITTDLR2	124017	171860	146477
A0A0G2K8N6	A0A0G2K8N6	A0A0G2K8N6_RAT	Ankmy2	Ankyrin repeat and MYND domain containing 2	1	IITTTNLHPVK	IITTTNLHPVK	2	IITTTNLHPVK2	1256.65		
A0A0G2K8N6	A0A0G2K8N6	A0A0G2K8N6_RAT	Ankmy2	Ankyrin repeat and MYND domain containing 2	1	IITTTNLHPVK	IITTTNLHPVK	3	IITTTNLHPVK3	35672.4	30523	33030.6
D3ZD62	D3ZD62	D3ZD62_RAT	Ndst2	[heparan sulfate]-glucosamine N-sulfotransferase	1	IITVLINPADR	IITVLINPADR	2	IITVLINPADR2	5328.78	2057.8	3842.28
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	IITVPVFHLFHR	IITVPVFHLFHR	3	IITVPVFHLFHR3	6121.37	11239.1	9252.14
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	IITWTTEPK	IITWTTEPK	2	IITWTTEPK2	39590.4	51174.1	36895.5
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	IIVACIETLR	IIVAC(UniMod:4)IETLR	2	IIVAC(UniMod:4)IETLR2	46980.6	32699.2	21612.5
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	IIVACIETLRK	IIVAC(UniMod:4)IETLRK	3	IIVAC(UniMod:4)IETLRK3	59329.8	60078.2	35663.1
Q5XIC4	Q5XIC4	SPG21_RAT	Spg21	Maspardin	1	IIVDDDDSK	IIVDDDDSK	2	IIVDDDDSK2	58415.2	62369.3	65368.8
P63245	P63245	RACK1_RAT	Rack1	Small ribosomal subunit protein RACK1	1	IIVDELK	IIVDELK	2	IIVDELK2	85214	69698.8	63017.2
P18298	P13444;P18298;A0A8I6G8F2	METK2_RAT	Mat2a	S-adenosylmethionine synthase isoform type-2	0	IIVDTYGGWGAHGGGAFSGK	IIVDTYGGWGAHGGGAFSGK	3	IIVDTYGGWGAHGGGAFSGK3	15563.9	11486.6	8801.63
O55043	O55043	ARHG7_RAT	Arhgef7	Rho guanine nucleotide exchange factor 7	1	IIVEETK	IIVEETK	2	IIVEETK2	38142.7	37655.3	26608.6
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	IIVEKPFGR	IIVEKPFGR	2	IIVEKPFGR2	20252.8	15779.5	17713.4
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	IIVFSACR	IIVFSAC(UniMod:4)R	2	IIVFSAC(UniMod:4)R2	303140	309734	283975
A0A8I6ANR6	A0A8I6ANR6	A0A8I6ANR6_RAT	Chuk	IkappaB kinase	1	IIVHTVQSQDR	IIVHTVQSQDR	3	IIVHTVQSQDR3	12205.6	16948.8	18927.6
F1LW77	D3ZCU8;F1LW77	F1LW77_RAT	Rab33b	RAB33B, member RAS oncogene family	0	IIVIGDSNVGK	IIVIGDSNVGK	2	IIVIGDSNVGK2	17317.1	17073.2	15364.6
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	IIVIMDSYDNDLVER	IIVIMDSYDNDLVER	2	IIVIMDSYDNDLVER2	10629.2	5892.6	8251.47
O35264	O35264	PA1B2_RAT	Pafah1b2	Platelet-activating factor acetylhydrolase IB subunit alpha2	1	IIVLGLLPR	IIVLGLLPR	2	IIVLGLLPR2	61120.5	60851.9	64010
D3ZMR9	D3ZMR9	D3ZMR9_RAT	Mrpl21	Mitochondrial ribosomal protein L21	1	IIVNPQTILR	IIVNPQTILR	2	IIVNPQTILR2	8226.01		4844.3
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	IIVNVSDMNDHSPWFTSSSYEGR	IIVNVSDMNDHSPWFTSSSYEGR	3	IIVNVSDMNDHSPWFTSSSYEGR3	7402.72	15784.6	4149.67
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	IIVPGICIGNTDTR	IIVPGIC(UniMod:4)IGNTDTR	2	IIVPGIC(UniMod:4)IGNTDTR2	81665.8	97610	97931
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	IIVPGICIGNTDTR	IIVPGIC(UniMod:4)IGNTDTR	3	IIVPGIC(UniMod:4)IGNTDTR3	7423.43	5322.86	7084.48
A0A0G2K6J6	A0A0G2K6J6	A0A0G2K6J6_RAT	Ipo8	Importin 8	1	IIVSDHVEFPVR	IIVSDHVEFPVR	3	IIVSDHVEFPVR3	14334.9	9230.64	12341.2
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	IIWEDIFPR	IIWEDIFPR	2	IIWEDIFPR2	22187.7	20487.8	25773.6
P41562	P41562	IDHC_RAT	Idh1	Isocitrate dehydrogenase [NADP] cytoplasmic	1	IIWELIK	IIWELIK	2	IIWELIK2	31808.6	24080.6	26558.4
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	IIWQFIK	IIWQFIK	2	IIWQFIK2	296667	278024	306329
Q496Z0	Q496Z0	ELP2_RAT	Elp2	Elongator complex protein 2	1	IIWSCDWSPDSK	IIWSC(UniMod:4)DWSPDSK	2	IIWSC(UniMod:4)DWSPDSK2	5374.15	10809.4	7158.31
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	IIYDDSK	IIYDDSK	1	IIYDDSK1	1265.6	1253.18	2058.12
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	IIYDDSK	IIYDDSK	2	IIYDDSK2	449787	483258	454084
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	IIYEQEGVYIHSSSGK	IIYEQEGVYIHSSSGK	2	IIYEQEGVYIHSSSGK2	3106.99		1911.26
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	IIYEQEGVYIHSSSGK	IIYEQEGVYIHSSSGK	3	IIYEQEGVYIHSSSGK3	25991	24929.5	31867.2
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	IIYGDPATFLPHLPQK	IIYGDPATFLPHLPQK	3	IIYGDPATFLPHLPQK3	11261.3	10511.8	6422.73
P48500	A0A0G2JWU1;A0A8I5ZVI4;P48500	TPIS_RAT	Tpi1	Triosephosphate isomerase	0	IIYGGSVTGATCK	IIYGGSVTGATC(UniMod:4)K	2	IIYGGSVTGATC(UniMod:4)K2	249576	207001	212088
D4ADV8	D4ADV8	D4ADV8_RAT	Dvl3	Dishevelled segment polarity protein 3	1	IIYHLDGQETPYLVK	IIYHLDGQETPYLVK	3	IIYHLDGQETPYLVK3	1906.22		6569.32
P18422	P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	1	IIYIVHDEVK	IIYIVHDEVK	2	IIYIVHDEVK2	104841	87495.6	93346
P18422	P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	1	IIYIVHDEVK	IIYIVHDEVK	3	IIYIVHDEVK3	800108	669675	739994
P18422	P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	1	IIYIVHDEVKDK	IIYIVHDEVKDK	2	IIYIVHDEVKDK2	47564.6	33919	40853
P18422	P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	1	IIYIVHDEVKDK	IIYIVHDEVKDK	3	IIYIVHDEVKDK3	2.38635e+06	2.36454e+06	2.38755e+06
D3ZFS7	D3ZFS7	D3ZFS7_RAT	Lyplal1	palmitoyl-protein hydrolase	1	IIYPTAPSRPYTPLK	IIYPTAPSRPYTPLK	3	IIYPTAPSRPYTPLK3	29037.4	18108.7	28632.2
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	IIYQAASPDEGALVR	IIYQAASPDEGALVR	2	IIYQAASPDEGALVR2	212080	236081	242215
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	IIYQAASPDEGALVR	IIYQAASPDEGALVR	3	IIYQAASPDEGALVR3	9428.05	11485.8	10266.1
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	IIYQELNSDIIDILR	IIYQELNSDIIDILR	2	IIYQELNSDIIDILR2	4423.29	3295.38	5643.53
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	IIYQELNSDIIDILR	IIYQELNSDIIDILR	3	IIYQELNSDIIDILR3	2074.84	7867.39	6502.66
F1M0B5	F1M0B5	F1M0B5_RAT	Cd84	CD84 molecule	1	IIYSAVSR	IIYSAVSR	2	IIYSAVSR2	560946	519762	513204
P82471	Q9JID2;P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	0	IIYSHFTCATDTENIR	IIYSHFTC(UniMod:4)ATDTENIR	2	IIYSHFTC(UniMod:4)ATDTENIR2	7929.57	4788.94	
P82471	Q9JID2;P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	0	IIYSHFTCATDTENIR	IIYSHFTC(UniMod:4)ATDTENIR	3	IIYSHFTC(UniMod:4)ATDTENIR3	114743	111494	122644
Q641Y2	Q641Y2	NDUS2_RAT	Ndufs2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	1	IKAPGFAHLAGLDK	IKAPGFAHLAGLDK	3	IKAPGFAHLAGLDK3	22553.3	22913.2	14060.6
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	IKAPSIELNADHPFLFLIR	IKAPSIELNADHPFLFLIR	3	IKAPSIELNADHPFLFLIR3	10904.9	21597	27509.7
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	IKAPSIELNADHPFLFLIR	IKAPSIELNADHPFLFLIR	4	IKAPSIELNADHPFLFLIR4	17937.2	16852.9	21892.1
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	IKDCGQPR	IKDC(UniMod:4)GQPR	2	IKDC(UniMod:4)GQPR2			245472
B1WBX5	B1WBX5	B1WBX5_RAT	Slc43a1	Solute carrier family 43 member 1	1	IKDCVDDPTEGTLNESASFGDAR	IKDC(UniMod:4)VDDPTEGTLNESASFGDAR	3	IKDC(UniMod:4)VDDPTEGTLNESASFGDAR3	1062.72	979.472	1297.27
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	IKDIAWTEDSK	IKDIAWTEDSK	2	IKDIAWTEDSK2	14740.3	14895.7	15713.2
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	IKDIAWTEDSK	IKDIAWTEDSK	3	IKDIAWTEDSK3	49899.2	54956.4	57734
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	IKDIAWTEDSKR	IKDIAWTEDSKR	2	IKDIAWTEDSKR2	2464.05	3664.97	3889.45
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	IKDIAWTEDSKR	IKDIAWTEDSKR	3	IKDIAWTEDSKR3	57806.6	63788.4	56468
Q68FQ9	Q68FQ9	Q68FQ9_RAT	Lancl2	LanC lantibiotic synthetase component C-like 2 (Bacterial)	1	IKDLLQQMEEGLK	IKDLLQQMEEGLK	3	IKDLLQQMEEGLK3	5170.87		3254.89
P49911	P49911	AN32A_RAT	Anp32a	Acidic leucine-rich nuclear phosphoprotein 32 family member A	1	IKDLSTIEPLK	IKDLSTIEPLK	2	IKDLSTIEPLK2	5138.45	2077.85	6135.51
P49911	P49911	AN32A_RAT	Anp32a	Acidic leucine-rich nuclear phosphoprotein 32 family member A	1	IKDLSTIEPLK	IKDLSTIEPLK	3	IKDLSTIEPLK3	10721.5	11161.8	19893.3
P49911	P49911	AN32A_RAT	Anp32a	Acidic leucine-rich nuclear phosphoprotein 32 family member A	1	IKDLSTIEPLKK	IKDLSTIEPLKK	3	IKDLSTIEPLKK3	15008.9	15338.8	18096.4
P05545	P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	1	IKDLTTPYIR	IKDLTTPYIR	2	IKDLTTPYIR2	33506.2	29098.1	28951
P05545	P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	1	IKDLTTPYIR	IKDLTTPYIR	3	IKDLTTPYIR3	537505	485470	534859
P05545	P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	1	IKDLTTPYIRDEELSCSVLELK	IKDLTTPYIRDEELSC(UniMod:4)SVLELK	3	IKDLTTPYIRDEELSC(UniMod:4)SVLELK3	469987	478356	409197
P05545	P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	1	IKDLTTPYIRDEELSCSVLELK	IKDLTTPYIRDEELSC(UniMod:4)SVLELK	4	IKDLTTPYIRDEELSC(UniMod:4)SVLELK4	586660	665398	660529
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	IKDMFHCKPK	IKDMFHC(UniMod:4)KPK	3	IKDMFHC(UniMod:4)KPK3	10614.2	11822.6	6242.14
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	IKDMVTQASPYLFEATGK	IKDMVTQASPYLFEATGK	3	IKDMVTQASPYLFEATGK3	2514.92	4118.89	
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	IKDPDAAKPEDWDER	IKDPDAAKPEDWDER	2	IKDPDAAKPEDWDER2	37276.5	28667.7	36731.3
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	IKDPDAAKPEDWDER	IKDPDAAKPEDWDER	3	IKDPDAAKPEDWDER3	30210.3	38073.3	35455.7
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	IKDPDAAKPEDWDER	IKDPDAAKPEDWDER	4	IKDPDAAKPEDWDER4	2.45123e+06	2.44905e+06	2.75152e+06
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	IKDQLDR	IKDQLDR	2	IKDQLDR2	17699.8		
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	IKDVIPQGAIDELTALVLVNTIYFK	IKDVIPQGAIDELTALVLVNTIYFK	3	IKDVIPQGAIDELTALVLVNTIYFK3	8568.77	8425.25	16770
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	IKDVLAEFNEGGSLK	IKDVLAEFNEGGSLK	3	IKDVLAEFNEGGSLK3	3022.39	4408.28	1981.88
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	IKEDGTGIELTGTGSCEIANTLSK	IKEDGTGIELTGTGSC(UniMod:4)EIANTLSK	3	IKEDGTGIELTGTGSC(UniMod:4)EIANTLSK3	2.59109e+06	2.18983e+06	1.99638e+06
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	IKEDGTGIELTGTGSCEIANTLSK	IKEDGTGIELTGTGSC(UniMod:4)EIANTLSK	4	IKEDGTGIELTGTGSC(UniMod:4)EIANTLSK4	6874.65	4515.68	6063.68
B5DEN9	B5DEN9	VPS28_RAT	Vps28	Vacuolar protein sorting-associated protein 28 homolog	1	IKEDRPITIK	IKEDRPITIK	3	IKEDRPITIK3	4143.83		
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	IKEEMNEDHSTPK	IKEEMNEDHSTPK	2	IKEEMNEDHSTPK2			8517.79
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	IKEEMNEDHSTPK	IKEEMNEDHSTPK	3	IKEEMNEDHSTPK3	7267.29		2018.9
P08650	P08650	CO5_RAT	C5	Complement C5	1	IKEGLVSVMSYR	IKEGLVSVMSYR	2	IKEGLVSVMSYR2	6308.92		
P08650	P08650	CO5_RAT	C5	Complement C5	1	IKEGLVSVMSYR	IKEGLVSVMSYR	3	IKEGLVSVMSYR3	66313.9	48356	49938.8
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	IKEGMEIPNLR	IKEGMEIPNLR	3	IKEGMEIPNLR3	15921.3	8896.28	21010.6
A0A8I6ASK1	A0A8I6ASK1	A0A8I6ASK1_RAT	P4ha2	procollagen-proline 4-dioxygenase	1	IKEIAKPK	IKEIAKPK	2	IKEIAKPK2			3277.62
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	IKEIAVTVK	IKEIAVTVK	2	IKEIAVTVK2	16901.4	23767.3	17470.3
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	IKEIVKK	IKEIVKK	2	IKEIVKK2			17690.4
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	IKELFVDSGLLR	IKELFVDSGLLR	3	IKELFVDSGLLR3	2926.01		
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	IKELTNICSPIISK	IKELTNIC(UniMod:4)SPIISK	2	IKELTNIC(UniMod:4)SPIISK2	8327.52	6507.31	4372.89
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	IKELTNICSPIISK	IKELTNIC(UniMod:4)SPIISK	3	IKELTNIC(UniMod:4)SPIISK3	250100	289257	243007
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	IKELTNICSPIISKPK	IKELTNIC(UniMod:4)SPIISKPK	3	IKELTNIC(UniMod:4)SPIISKPK3	22054.5	20952.4	18745.8
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	IKELTNICSPIISKPK	IKELTNIC(UniMod:4)SPIISKPK	4	IKELTNIC(UniMod:4)SPIISKPK4	77787.9	78950.8	77106.6
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	IKELVVTNLGFDTR	IKELVVTNLGFDTR	3	IKELVVTNLGFDTR3	34995.3	34283.9	37021
P02761	M0R8N5;P02761	MUP_RAT		Major urinary protein	0	IKENGECR	IKENGEC(UniMod:4)R	2	IKENGEC(UniMod:4)R2			7462.27
Q78E14	Q78E14	Q78E14_RAT	Obp3	Alpha-2u globulin PGCL4	1	IKENGVCTEFSLVADK	IKENGVC(UniMod:4)TEFSLVADK	3	IKENGVC(UniMod:4)TEFSLVADK3	7048.98		7238.72
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	IKENTEIINQLQGR	IKENTEIINQLQGR	3	IKENTEIINQLQGR3	3613.63	3548.26	
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	IKEPLSVLEILGLIQR	IKEPLSVLEILGLIQR	3	IKEPLSVLEILGLIQR3	3930.32	7277.86	5946.13
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	IKEQEDYIR	IKEQEDYIR	3	IKEQEDYIR3	40110.9	43429.8	25410.2
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	IKETVDQVEELR	IKETVDQVEELR	2	IKETVDQVEELR2	2756.48	2321.76	5281.46
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	IKETVDQVEELR	IKETVDQVEELR	3	IKETVDQVEELR3	26577.5	21366.8	19178.6
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	IKETVDQVEELRR	IKETVDQVEELRR	3	IKETVDQVEELRR3	190518	242471	210197
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	IKETVDQVEELRR	IKETVDQVEELRR	4	IKETVDQVEELRR4	184988	258927	211575
P05369	P05369	FPPS_RAT	Fdps	Farnesyl pyrophosphate synthase	1	IKEVLEYNTVGGK	IKEVLEYNTVGGK	2	IKEVLEYNTVGGK2		5905.4	
P05369	P05369	FPPS_RAT	Fdps	Farnesyl pyrophosphate synthase	1	IKEVLEYNTVGGK	IKEVLEYNTVGGK	3	IKEVLEYNTVGGK3	28622.4	26991.4	27425.5
P05544	P05544;P09005	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	IKEVTTPYVR	IKEVTTPYVR	2	IKEVTTPYVR2	78670.6	66116	63568.4
P05544	P05544;P09005	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	IKEVTTPYVR	IKEVTTPYVR	3	IKEVTTPYVR3	545609	520319	511553
P05544	P05544;P09005	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	IKEVTTPYVRDEELSCSVLELK	IKEVTTPYVRDEELSC(UniMod:4)SVLELK	3	IKEVTTPYVRDEELSC(UniMod:4)SVLELK3	168008	190142	179773
P05544	P05544;P09005	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	IKEVTTPYVRDEELSCSVLELK	IKEVTTPYVRDEELSC(UniMod:4)SVLELK	4	IKEVTTPYVRDEELSC(UniMod:4)SVLELK4	474822	543577	576166
Q6IFW6	Q6IFW6	K1C10_RAT	Krt10	Keratin, type I cytoskeletal 10	1	IKEWYEK	IKEWYEK	2	IKEWYEK2	196058	182135	141399
M0R4P9	M0R4P9	M0R4P9_RAT	Ube2h	Ubiquitin-conjugating enzyme E2H	1	IKEYIQK	IKEYIQK	2	IKEYIQK2	34318.1	31559.6	27512.8
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	IKGEELSEANVR	IKGEELSEANVR	3	IKGEELSEANVR3	7835.62	7801.63	7082.55
P63159	A0A8I6GBU6;A0A8I6GKR4;P63159;D3ZLG3;A0A8I6A2H1;A0A8I5Y7D7;A0A0G2K6P4	HMGB1_RAT	Hmgb1	High mobility group protein B1	0	IKGEHPGLSIGDVAK	IKGEHPGLSIGDVAK	3	IKGEHPGLSIGDVAK3	21583.4	22626.3	33392.6
P63159	A0A8I6GBU6;A0A8I6GKR4;P63159;D3ZLG3;A0A8I6A2H1;A0A8I5Y7D7;A0A0G2K6P4	HMGB1_RAT	Hmgb1	High mobility group protein B1	0	IKGEHPGLSIGDVAK	IKGEHPGLSIGDVAK	4	IKGEHPGLSIGDVAK4	20841.1	17261.2	14580.6
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	IKGPIYLGGVAPGR	IKGPIYLGGVAPGR	3	IKGPIYLGGVAPGR3	14092.6	13357.2	6745.76
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	IKGPNAVQLVK	IKGPNAVQLVK	2	IKGPNAVQLVK2	3990.47	6569.74	3727.45
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	IKGPNAVQLVK	IKGPNAVQLVK	3	IKGPNAVQLVK3	49722.8	59643.4	50538.7
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	IKGWFEPLVEDMQR	IKGWFEPLVEDMQR	2	IKGWFEPLVEDMQR2	143074	171767	145707
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	IKGWFEPLVEDMQR	IKGWFEPLVEDMQR	3	IKGWFEPLVEDMQR3	1.70336e+06	2.2007e+06	2.12985e+06
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	IKGWFEPLVEDMQRQWANLMEK	IKGWFEPLVEDMQRQWANLMEK	3	IKGWFEPLVEDMQRQWANLMEK3	9182.12	6614.13	9802.24
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	IKGWFEPLVEDMQRQWANLMEK	IKGWFEPLVEDMQRQWANLMEK	4	IKGWFEPLVEDMQRQWANLMEK4	28170.3	23942.2	19179.8
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	IKHPTYCYEMNMVVLSAPAVESELSPR	IKHPTYC(UniMod:4)YEMNMVVLSAPAVESELSPR	4	IKHPTYC(UniMod:4)YEMNMVVLSAPAVESELSPR4	1.00921e+06	859785	770129
A0A0G2JVT8	A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	1	IKIPVTSVYSGPLR	IKIPVTSVYSGPLR	3	IKIPVTSVYSGPLR3	4940.93	7645.88	3913.1
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	IKLPQGYHPNHVEEEWGK	IKLPQGYHPNHVEEEWGK	4	IKLPQGYHPNHVEEEWGK4	5102.63	6141.46	
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	IKLPTYCNTDYDMVPLAVPAVALDSSTDR	IKLPTYC(UniMod:4)NTDYDMVPLAVPAVALDSSTDR	4	IKLPTYC(UniMod:4)NTDYDMVPLAVPAVALDSSTDR4	886748	670959	689298
D4A6K4	D4A6K4	D4A6K4_RAT	Golga1	Golgin A1	1	IKPDNELFEVR	IKPDNELFEVR	3	IKPDNELFEVR3	7396.23	8503.53	
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	IKPHLMSQELPEDWDK	IKPHLMSQELPEDWDK	3	IKPHLMSQELPEDWDK3	70495.3	58417.4	77040.6
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	IKPHLMSQELPEDWDK	IKPHLMSQELPEDWDK	4	IKPHLMSQELPEDWDK4	49912.6	39753.7	53383
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	IKPHLMSQELPEDWDKQPVK	IKPHLMSQELPEDWDKQPVK	3	IKPHLMSQELPEDWDKQPVK3	170941	178929	183765
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	IKPHLMSQELPEDWDKQPVK	IKPHLMSQELPEDWDKQPVK	4	IKPHLMSQELPEDWDKQPVK4	1.70778e+06	1.87124e+06	1.72887e+06
Q6AXX6	Q6AXX6	PXL2A_RAT	Prxl2a	Peroxiredoxin-like 2A	1	IKPQTPASR	IKPQTPASR	2	IKPQTPASR2	63504.1		39890.3
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	IKPSSSANAIYSLAAR	IKPSSSANAIYSLAAR	3	IKPSSSANAIYSLAAR3	42512.4	32194.9	40867.5
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	IKPSSSANAIYSLAARPLPVPK	IKPSSSANAIYSLAARPLPVPK	4	IKPSSSANAIYSLAARPLPVPK4	16712.4	28029.6	17948
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	IKPTALIGVAAIGGAFTEQILK	IKPTALIGVAAIGGAFTEQILK	3	IKPTALIGVAAIGGAFTEQILK3	6496.82	13502.2	12109.7
D3ZG58	D3ZG58	D3ZG58_RAT	Zwilch	Protein zwilch	1	IKQPVTALPPLWVR	IKQPVTALPPLWVR	3	IKQPVTALPPLWVR3	7766.62		7677.72
Q5XI64	Q5XI64	ABHD6_RAT	Abhd6	Monoacylglycerol lipase ABHD6	1	IKVPTQIIWGK	IKVPTQIIWGK	3	IKVPTQIIWGK3	5924.92	12482.5	7508.42
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	IKVPVDWNR	IKVPVDWNR	2	IKVPVDWNR2	23163.6	17399.7	13786.8
P62138	P62138;P63088;P62142	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	0	IKYPENFFLLR	IKYPENFFLLR	2	IKYPENFFLLR2	52489.7	46877.1	38344.2
P62138	P62138;P63088;P62142	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	0	IKYPENFFLLR	IKYPENFFLLR	3	IKYPENFFLLR3	367641	307328	329871
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	ILAAAIWYYSLEHSTDDYASFSR	ILAAAIWYYSLEHSTDDYASFSR	3	ILAAAIWYYSLEHSTDDYASFSR3	3566.85	1945.21	2314.21
A0A8I6AMS6	A0A8I6AMS6	A0A8I6AMS6_RAT	Rangap1	RAN GTPase activating protein 1	1	ILAAALTECHR	ILAAALTEC(UniMod:4)HR	3	ILAAALTEC(UniMod:4)HR3	9655.32	8815.31	5756.65
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	ILAALESVGK	ILAALESVGK	2	ILAALESVGK2	23058.8	28223.7	26628.7
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	ILAAPVELALVVMK	ILAAPVELALVVMK	2	ILAAPVELALVVMK2	87916.5	102574	93692.8
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	ILAAPVELALVVMK	ILAAPVELALVVMK	3	ILAAPVELALVVMK3	5141.7	4669.75	3125.27
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	ILAATQFEPTAAR	ILAATQFEPTAAR	2	ILAATQFEPTAAR2	43371.2	31475.4	27394.4
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	ILACAPLYHWR	ILAC(UniMod:4)APLYHWR	2	ILAC(UniMod:4)APLYHWR2	35693.3	40358.1	35523.4
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	ILACAPLYHWR	ILAC(UniMod:4)APLYHWR	3	ILAC(UniMod:4)APLYHWR3	431472	368740	434135
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	ILACDDLDEAAK	ILAC(UniMod:4)DDLDEAAK	2	ILAC(UniMod:4)DDLDEAAK2	122132	131627	117475
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ILADATAK	ILADATAK	1	ILADATAK1	26855.6	12942	15456.8
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ILADATAK	ILADATAK	2	ILADATAK2	5.55473e+06	5.91344e+06	5.87082e+06
Q7TSU1	D4A631;Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	0	ILADKEVK	ILADKEVK	2	ILADKEVK2	8753.78	9202.96	5051.76
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	ILADLEDYLNELWEDKEGK	ILADLEDYLNELWEDKEGK	3	ILADLEDYLNELWEDKEGK3	17870.5	20641.5	21342.9
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	ILADLEDYLNELWEDKEGKK	ILADLEDYLNELWEDKEGKK	4	ILADLEDYLNELWEDKEGKK4	5772.1	15173	5615.5
D3ZWF3	D3ZWF3	D3ZWF3_RAT	Immp1l	Mitochondrial inner membrane protease subunit	1	ILADNPPDIFK	ILADNPPDIFK	2	ILADNPPDIFK2	9161.58	3387.64	
P60123	A0A0G2K0H9;P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	0	ILADQQDK	ILADQQDK	2	ILADQQDK2	209950	197278	255763
O08658	O08658	NUP88_RAT	Nup88	Nuclear pore complex protein Nup88	1	ILAEAPDSFEK	ILAEAPDSFEK	2	ILAEAPDSFEK2	5226.57	7975.06	7479.45
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	ILAEGGGAK	ILAEGGGAK	1	ILAEGGGAK1			1690.35
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	ILAEGGGAK	ILAEGGGAK	2	ILAEGGGAK2	272363	243427	245478
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	ILAENLGEATEDIDK	ILAENLGEATEDIDK	2	ILAENLGEATEDIDK2	15621.2	10243.9	9389.48
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	ILAENLGEATEDIDKGKPR	ILAENLGEATEDIDKGKPR	3	ILAENLGEATEDIDKGKPR3	5677.06	10023.4	
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	ILAENLGEATEDIDKGKPR	ILAENLGEATEDIDKGKPR	4	ILAENLGEATEDIDKGKPR4	23453.5	28219.3	28612
P36970	P36970	GPX4_RAT	Gpx4	Phospholipid hydroperoxide glutathione peroxidase	1	ILAFPCNQFGR	ILAFPC(UniMod:4)NQFGR	2	ILAFPC(UniMod:4)NQFGR2	177167	197917	227117
Q4FZT0	Q4FZT0	STML2_RAT	Stoml2	Stomatin-like protein 2, mitochondrial	1	ILAGALTQHNGDAAASLTVAEQYVSAFSK	ILAGALTQHNGDAAASLTVAEQYVSAFSK	4	ILAGALTQHNGDAAASLTVAEQYVSAFSK4		2312.39	5939.02
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	ILAGDKNYITGDELR	ILAGDKNYITGDELR	2	ILAGDKNYITGDELR2	4391.28	1768.41	
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	ILAGDKNYITGDELR	ILAGDKNYITGDELR	3	ILAGDKNYITGDELR3	220684	331649	345651
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	ILAGDKNYITGDELRR	ILAGDKNYITGDELRR	3	ILAGDKNYITGDELRR3	52663.7	95617.1	75332.2
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	ILAGDKNYITGDELRR	ILAGDKNYITGDELRR	4	ILAGDKNYITGDELRR4	52423.2	77696.1	59424.8
Q9QYF3	Q9QYF3	MYO5A_RAT	Myo5a	Unconventional myosin-Va	1	ILAGILHLGNVGFASR	ILAGILHLGNVGFASR	3	ILAGILHLGNVGFASR3	9261.68	11598.3	7750.78
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	ILAGLGFDPEMQNRPTQK	ILAGLGFDPEMQNRPTQK	3	ILAGLGFDPEMQNRPTQK3	140656	138482	135891
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	ILAHLTGTEFMQDPDEEFMK	ILAHLTGTEFMQDPDEEFMK	3	ILAHLTGTEFMQDPDEEFMK3	86696.2	91141.5	109480
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	ILAHLTGTEFMQDPDEEFMKK	ILAHLTGTEFMQDPDEEFMKK	3	ILAHLTGTEFMQDPDEEFMKK3	3459.43	4785.64	5159.61
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	ILAHLTGTEFMQDPDEEFMKK	ILAHLTGTEFMQDPDEEFMKK	4	ILAHLTGTEFMQDPDEEFMKK4	16550.2	19582.7	12585.7
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	ILAHWACYK	ILAHWAC(UniMod:4)YK	3	ILAHWAC(UniMod:4)YK3	30339	29704.6	31647.3
D3ZRC4	D3ZRC4	PLPL8_RAT	Pnpla8	Calcium-independent phospholipase A2-gamma	1	ILAIDGGGTR	ILAIDGGGTR	2	ILAIDGGGTR2	22250.7	19072.1	15134.4
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	ILAIGLINEALDEGDAQK	ILAIGLINEALDEGDAQK	2	ILAIGLINEALDEGDAQK2	17815.8	24542.1	15459.5
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	ILAIGLINEALDEGDAQK	ILAIGLINEALDEGDAQK	3	ILAIGLINEALDEGDAQK3	15612.6	27842.3	24564.5
P70705	P70705	ATP7A_RAT	Atp7a	Copper-transporting ATPase 1	1	ILAIVGTAESNSEHPLGAAVTK	ILAIVGTAESNSEHPLGAAVTK	3	ILAIVGTAESNSEHPLGAAVTK3	3031.56		2568.17
O35763	O35763;Q5PQK5	MOES_RAT	Msn	Moesin	0	ILALCMGNHELYMR	ILALC(UniMod:4)MGNHELYMR	2	ILALC(UniMod:4)MGNHELYMR2	18904.7	10292.3	10062.2
O35763	O35763;Q5PQK5	MOES_RAT	Msn	Moesin	0	ILALCMGNHELYMR	ILALC(UniMod:4)MGNHELYMR	3	ILALC(UniMod:4)MGNHELYMR3	76248.1	66504.3	70236.3
A0A8I5ZZ89	A0A8I5ZZ89	A0A8I5ZZ89_RAT	Elp3	Elongator complex protein 3	1	ILALVPPWTR	ILALVPPWTR	2	ILALVPPWTR2	16368.7	15011.6	19113.8
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	ILANADTMK	ILANADTMK	2	ILANADTMK2	89307.8	102025	92274.3
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	ILANGFTDTVGNILK	ILANGFTDTVGNILK	2	ILANGFTDTVGNILK2	18163.3	18375.6	13550.2
F7FHP0	F7FHP0	F7FHP0_RAT	Angptl3	Angiopoietin-like 3	1	ILANGLLQLGHGLK	ILANGLLQLGHGLK	3	ILANGLLQLGHGLK3	58496.4	47684	53915.9
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	ILANLEQGLAEDGGLSSVTQESR	ILANLEQGLAEDGGLSSVTQESR	3	ILANLEQGLAEDGGLSSVTQESR3	9086.68	8033.12	
A0A0G2K410	A0A0G2K410	A0A0G2K410_RAT	Ap4s1	AP complex subunit sigma	1	ILAPLLILDK	ILAPLLILDK	2	ILAPLLILDK2	13822.6	6228.03	11674.3
A0A8I5ZNG4	A0A8I5ZNG4	A0A8I5ZNG4_RAT	Rictor	RPTOR independent companion of MTOR, complex 2	1	ILAPYTDFHYR	ILAPYTDFHYR	3	ILAPYTDFHYR3	11591.4	11088.4	10139
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	ILAPYVGGWGESNGAVIK	ILAPYVGGWGESNGAVIK	2	ILAPYVGGWGESNGAVIK2	23359.8	14947.7	21971.2
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	ILAPYVGGWGESNGAVIK	ILAPYVGGWGESNGAVIK	3	ILAPYVGGWGESNGAVIK3	6786.02	8555.98	9560.11
Q6PEC3	Q6PEC3	YIF1B_RAT	Yif1b	Protein YIF1B	1	ILAQAAAEGVPVR	ILAQAAAEGVPVR	2	ILAQAAAEGVPVR2	29694.1	25997.5	26626
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ILAQATSDLVNAIK	ILAQATSDLVNAIK	2	ILAQATSDLVNAIK2	2.71652e+06	2.69011e+06	2.74642e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ILAQATSDLVNAIK	ILAQATSDLVNAIK	3	ILAQATSDLVNAIK3	46395.7	47571.4	46765.6
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	ILAQITGTEHLK	ILAQITGTEHLK	2	ILAQITGTEHLK2	3054.99	1204.34	1588.82
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	ILAQITGTEHLK	ILAQITGTEHLK	3	ILAQITGTEHLK3	29445.6	25845.3	19133.1
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	ILASGDNQGIPIMSNIK	ILASGDNQGIPIMSNIK	2	ILASGDNQGIPIMSNIK2	2.79591e+06	2.55117e+06	2.53058e+06
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	ILASGDNQGIPIMSNIK	ILASGDNQGIPIMSNIK	3	ILASGDNQGIPIMSNIK3	580671	534712	545748
A0A0G2JT44	A0A0G2JT44	A0A0G2JT44_RAT	Tmc6	Transmembrane channel-like protein	1	ILASMPSR	ILASMPSR	2	ILASMPSR2	107408	105420	120690
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	ILASSLVYNISDGQFASR	ILASSLVYNISDGQFASR	2	ILASSLVYNISDGQFASR2	4404.45		
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	ILASSLVYNISDGQFASR	ILASSLVYNISDGQFASR	3	ILASSLVYNISDGQFASR3	3350.82	7279.06	4892.68
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	ILASTADSK	ILASTADSK	2	ILASTADSK2	108664	96726.8	82854.2
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	ILATGANVILTTGGIDDMCLK	ILATGANVILTTGGIDDMC(UniMod:4)LK	3	ILATGANVILTTGGIDDMC(UniMod:4)LK3	40940.7	37994.7	43947.2
Q5RK00	Q5RK00	RM46_RAT	Mrpl46	Large ribosomal subunit protein mL46	1	ILATLSENNMEAK	ILATLSENNMEAK	2	ILATLSENNMEAK2	3013.65	2639.76	
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	ILATPPQEDAPSVDIANIR	ILATPPQEDAPSVDIANIR	3	ILATPPQEDAPSVDIANIR3	95921.1	80722.8	87568
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	ILATSFICTLPAGHR	ILATSFIC(UniMod:4)TLPAGHR	3	ILATSFIC(UniMod:4)TLPAGHR3	28670	41168	57063.5
A0A8I6GK03	A0A8I6GK03	A0A8I6GK03_RAT	Tubgcp4	Gamma-tubulin complex component	1	ILAVCHGVMYK	ILAVC(UniMod:4)HGVMYK	3	ILAVC(UniMod:4)HGVMYK3	2492.63		3673.74
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	ILAVDDELVAGCPIEK	ILAVDDELVAGC(UniMod:4)PIEK	2	ILAVDDELVAGC(UniMod:4)PIEK2	13848.6	13600.8	13988.7
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	ILAVGTQTGALR	ILAVGTQTGALR	2	ILAVGTQTGALR2	82655.7	71377.5	71284.6
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	ILAYTEGLHGK	ILAYTEGLHGK	2	ILAYTEGLHGK2	5048.59	5829.65	
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	ILAYTEGLHGK	ILAYTEGLHGK	3	ILAYTEGLHGK3	20526.6	21582	15663.8
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	ILCETVK	ILC(UniMod:4)ETVK	2	ILC(UniMod:4)ETVK2	117161	123220	92860.2
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	ILCFHGPPGVGK	ILC(UniMod:4)FHGPPGVGK	3	ILC(UniMod:4)FHGPPGVGK3	98682.8	118039	122067
D3ZXY4	D3ZXY4	D3ZXY4_RAT	Aldh8a1	Aldehyde dehydrogenase 8 family, member A1	1	ILCGEGVDQLSLPLR	ILC(UniMod:4)GEGVDQLSLPLR	2	ILC(UniMod:4)GEGVDQLSLPLR2	4187.69		
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	ILCILGPNEPAPFKPEGELHELGAK	ILC(UniMod:4)ILGPNEPAPFKPEGELHELGAK	3	ILC(UniMod:4)ILGPNEPAPFKPEGELHELGAK3	52431.7	43399.3	43170.2
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	ILCILGPNEPAPFKPEGELHELGAK	ILC(UniMod:4)ILGPNEPAPFKPEGELHELGAK	4	ILC(UniMod:4)ILGPNEPAPFKPEGELHELGAK4	316569	329146	328251
B2RYM5	B2RYM5	BRCC3_RAT	Brcc3	Lys-63-specific deubiquitinase BRCC36	1	ILCQEEQDAYR	ILC(UniMod:4)QEEQDAYR	2	ILC(UniMod:4)QEEQDAYR2	23874.7	18729.4	17546.2
B2RYM5	B2RYM5	BRCC3_RAT	Brcc3	Lys-63-specific deubiquitinase BRCC36	1	ILCQEEQDAYRR	ILC(UniMod:4)QEEQDAYRR	3	ILC(UniMod:4)QEEQDAYRR3	55136	85582	60752.8
D4A7H9	D4A7H9	D4A7H9_RAT	Chmp7	Charged multivesicular body protein 7	1	ILDAELEAELEK	ILDAELEAELEK	2	ILDAELEAELEK2	5395.72	7141.76	2871.79
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	ILDAIFK	ILDAIFK	2	ILDAIFK2	112303	114722	89305
F1LM66	F1LM66	F1LM66_RAT	Eftud2	116 kDa U5 small nuclear ribonucleoprotein component	1	ILDAVVAQEPLHR	ILDAVVAQEPLHR	3	ILDAVVAQEPLHR3	5988.89	3557.79	6056.76
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	ILDAWDTNEK	ILDAWDTNEK	2	ILDAWDTNEK2	258107	274264	238974
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	ILDAWDTNEKK	ILDAWDTNEKK	2	ILDAWDTNEKK2	2915.95	803.713	2959.52
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	ILDAWDTNEKK	ILDAWDTNEKK	3	ILDAWDTNEKK3	31629.4	59526.5	38909.1
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	ILDCGSEDTEVHTYPFGWYQK	ILDC(UniMod:4)GSEDTEVHTYPFGWYQK	3	ILDC(UniMod:4)GSEDTEVHTYPFGWYQK3	10772.2	12741.7	18033.7
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	ILDDDTIITTLENLK	ILDDDTIITTLENLK	2	ILDDDTIITTLENLK2	110459	93156	123255
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	ILDDDTIITTLENLK	ILDDDTIITTLENLK	3	ILDDDTIITTLENLK3	35990.8	50072.3	39167.6
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	ILDDDTIITTLENLKR	ILDDDTIITTLENLKR	2	ILDDDTIITTLENLKR2	8182.61	5055.7	
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	ILDDDTIITTLENLKR	ILDDDTIITTLENLKR	3	ILDDDTIITTLENLKR3	16218.6	29833.9	30188.4
Q9JI03	Q9JI03	CO5A1_RAT	Col5a1	Collagen alpha-1(V) chain	1	ILDDEIFEGDIQQLLFVSDHR	ILDDEIFEGDIQQLLFVSDHR	3	ILDDEIFEGDIQQLLFVSDHR3	8704	10479.3	10871.9
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	ILDDICVAR	ILDDIC(UniMod:4)VAR	2	ILDDIC(UniMod:4)VAR2	105629	85889.9	89953.2
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	ILDDMKEEDYLNFILFSTGVTTWK	ILDDMKEEDYLNFILFSTGVTTWK	3	ILDDMKEEDYLNFILFSTGVTTWK3	323318	443370	2.33451e+06
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	ILDDMKEEDYLNFILFSTGVTTWK	ILDDMKEEDYLNFILFSTGVTTWK	4	ILDDMKEEDYLNFILFSTGVTTWK4	61642.5	62821.9	13893.3
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	ILDDMKEEDYLNFILFSTGVTTWKDHLVK	ILDDMKEEDYLNFILFSTGVTTWKDHLVK	4	ILDDMKEEDYLNFILFSTGVTTWKDHLVK4	336291	310638	274280
P0C5H9	P0C5H9	MANF_RAT	Manf	Mesencephalic astrocyte-derived neurotrophic factor	1	ILDDWGEMCK	ILDDWGEMC(UniMod:4)K	2	ILDDWGEMC(UniMod:4)K2	36054.3	25207.1	27278.5
Q91Y81	Q91Y81	SEPT2_RAT	Septin2	Septin-2	1	ILDEIEEHSIK	ILDEIEEHSIK	3	ILDEIEEHSIK3	94215.8	81743.3	101128
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	ILDENDNRPQFLQK	ILDENDNRPQFLQK	3	ILDENDNRPQFLQK3	254630	296685	283034
D3ZX30	D3ZLQ1;A0A8I6ACY0;D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	0	ILDEVEK	ILDEVEK	2	ILDEVEK2	90327.9	126911	110906
P70618	A0A0G2KB06;Q63538;P49187;P49185;Q9WTY9;P70618;P49186	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	0	ILDFGLAR	ILDFGLAR	2	ILDFGLAR2	747586	1.00341e+06	855488
Q5RJS8	Q5RJS8	TPST2_RAT	Tpst2	Protein-tyrosine sulfotransferase 2	1	ILDFLGIAWSDTVLHHEDLIGKPGGVSLSK	ILDFLGIAWSDTVLHHEDLIGKPGGVSLSK	4	ILDFLGIAWSDTVLHHEDLIGKPGGVSLSK4	20439.4	13756.1	8879.91
F1M386	F1M386	RPGF2_RAT	Rapgef2	Rap guanine nucleotide exchange factor 2	1	ILDFSTTPDLPDQVLR	ILDFSTTPDLPDQVLR	2	ILDFSTTPDLPDQVLR2	10122.9	13738.1	16373
A0A8J8YFS5	A0A8J8YFS5	A0A8J8YFS5_RAT	Hars1	Histidine--tRNA ligase, cytoplasmic	1	ILDGMFAVCGVPDSK	ILDGMFAVC(UniMod:4)GVPDSK	2	ILDGMFAVC(UniMod:4)GVPDSK2	9463.94	13703.2	15577.3
F1LTX4	F1LTX4	F1LTX4_RAT	Lrrn4	Leucine rich repeat neuronal 4	1	ILDGSHNLLHALSEPVLR	ILDGSHNLLHALSEPVLR	3	ILDGSHNLLHALSEPVLR3	67411.6	79693.6	68661.9
F1LTX4	F1LTX4	F1LTX4_RAT	Lrrn4	Leucine rich repeat neuronal 4	1	ILDGSHNLLHALSEPVLR	ILDGSHNLLHALSEPVLR	4	ILDGSHNLLHALSEPVLR4	24713.7	30187.2	31529.5
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	ILDHLTMIDNK	ILDHLTMIDNK	2	ILDHLTMIDNK2	16176.5	10771.2	9891
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	ILDHLTMIDNK	ILDHLTMIDNK	3	ILDHLTMIDNK3	107383	115721	105688
O35165	O35165	GOSR2_RAT	Gosr2	Golgi SNAP receptor complex member 2	1	ILDIANMLGLSNTVMR	ILDIANMLGLSNTVMR	2	ILDIANMLGLSNTVMR2	2799.62	10380.5	14073.7
O35165	O35165	GOSR2_RAT	Gosr2	Golgi SNAP receptor complex member 2	1	ILDIANMLGLSNTVMR	ILDIANMLGLSNTVMR	3	ILDIANMLGLSNTVMR3	9244.42	3497.96	6969.12
A0A0G2JTJ9	A0A0G2JTJ9	A0A0G2JTJ9_RAT	Tfcp2	Transcription factor CP2	1	ILDIDIPMSVGVIDPR	ILDIDIPMSVGVIDPR	2	ILDIDIPMSVGVIDPR2	9713.3	8060.99	4986.09
Q6AXR4	Q6AXR4	HEXB_RAT	Hexb	Beta-hexosaminidase subunit beta	1	ILDIITSLKK	ILDIITSLKK	3	ILDIITSLKK3	3651.09	4006.24	7468.88
O88453	O88453;A0A8I6AJV7	SAFB1_RAT	Safb	Scaffold attachment factor B1	0	ILDILGETCK	ILDILGETC(UniMod:4)K	2	ILDILGETC(UniMod:4)K2	25310	17216.6	21046.7
O35094	O35094	TIM44_RAT	Timm44	Mitochondrial import inner membrane translocase subunit TIM44	1	ILDISNVDLAMGK	ILDISNVDLAMGK	2	ILDISNVDLAMGK2	17687.8	24404	25006.6
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	ILDLCVLFGK	ILDLC(UniMod:4)VLFGK	2	ILDLC(UniMod:4)VLFGK2	23541	24395.8	6218.27
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	ILDLEDLER	ILDLEDLER	2	ILDLEDLER2	222584	191135	226258
P47942	P47942	DPYL2_RAT	Dpysl2	Dihydropyrimidinase-related protein 2	1	ILDLGITGPEGHVLSRPEEVEAEAVNR	ILDLGITGPEGHVLSRPEEVEAEAVNR	4	ILDLGITGPEGHVLSRPEEVEAEAVNR4	59231.8	22208.4	27608
Q8VHT6	Q8VHT6	AS3MT_RAT	As3mt	Arsenite methyltransferase	1	ILDLGSGSGR	ILDLGSGSGR	2	ILDLGSGSGR2		34001.8	23152.8
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	ILDLQTAVEALVR	ILDLQTAVEALVR	2	ILDLQTAVEALVR2	13534.5	15178.2	12101.4
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	ILDLQTAVEALVR	ILDLQTAVEALVR	3	ILDLQTAVEALVR3	1611.71		2629.79
Q62991	Q62991	SCFD1_RAT	Scfd1	Sec1 family domain-containing protein 1	1	ILDNLMEMK	ILDNLMEMK	2	ILDNLMEMK2	44770.8	47581.5	49408.7
P61943	P61943	SIA10_RAT	St3gal6	Type 2 lactosamine alpha-2,3-sialyltransferase	1	ILDPYIIR	ILDPYIIR	2	ILDPYIIR2	14442.5	8584.26	10591
P52555	P52555	ERP29_RAT	Erp29	Endoplasmic reticulum resident protein 29	1	ILDQGEDFPASELAR	ILDQGEDFPASELAR	2	ILDQGEDFPASELAR2	26893.7	18554.6	25814.1
D4A3I5	D4A3I5	D4A3I5_RAT	Fhip2a	FHF complex subunit HOOK interacting protein 2A	1	ILDQPYDVNLQVTSVLSR	ILDQPYDVNLQVTSVLSR	3	ILDQPYDVNLQVTSVLSR3	3995.65	4409.72	
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	ILDQSEAEK	ILDQSEAEK	2	ILDQSEAEK2	400124	359934	363889
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	ILDRDQGPSSFDFTVTAIDGGGLK	ILDRDQGPSSFDFTVTAIDGGGLK	3	ILDRDQGPSSFDFTVTAIDGGGLK3	5825.76	6240.82	11605.7
D3ZUV2	D3ZUV2	D3ZUV2_RAT	Mib1	RING-type E3 ubiquitin transferase	1	ILDSAPTGIK	ILDSAPTGIK	2	ILDSAPTGIK2	23882.8	13703.2	16196.3
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	ILDSNKR	ILDSNKR	2	ILDSNKR2			9370.67
P02401	P02401;D4A4D5	RLA2_RAT	Rplp2	Large ribosomal subunit protein P2	0	ILDSVGIEADDER	ILDSVGIEADDER	2	ILDSVGIEADDER2	243966	266713	250368
P02401	P02401;D4A4D5	RLA2_RAT	Rplp2	Large ribosomal subunit protein P2	0	ILDSVGIEADDER	ILDSVGIEADDER	3	ILDSVGIEADDER3	2960.8	4941.33	
P02401	P02401;D4A4D5	RLA2_RAT	Rplp2	Large ribosomal subunit protein P2	0	ILDSVGIEADDERLNK	ILDSVGIEADDERLNK	2	ILDSVGIEADDERLNK2	6786.94	9644.67	5107.46
P02401	P02401;D4A4D5	RLA2_RAT	Rplp2	Large ribosomal subunit protein P2	0	ILDSVGIEADDERLNK	ILDSVGIEADDERLNK	3	ILDSVGIEADDERLNK3	44934.8	57058.1	61241.8
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	ILDSVLHHLVPAWDHTLGTFSEIK	ILDSVLHHLVPAWDHTLGTFSEIK	4	ILDSVLHHLVPAWDHTLGTFSEIK4	19596.7	14438.9	
Q5U2N3	Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	1	ILDTIDIVR	ILDTIDIVR	2	ILDTIDIVR2			13186.7
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	ILDTSSLTQSAPASPTNK	ILDTSSLTQSAPASPTNK	2	ILDTSSLTQSAPASPTNK2	5550.19	8213.71	5204.17
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	ILDVAQDLK	ILDVAQDLK	2	ILDVAQDLK2	5997.67	10631.2	9379.85
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	ILDVDWCTSDK	ILDVDWC(UniMod:4)TSDK	2	ILDVDWC(UniMod:4)TSDK2	20265.5	20747.2	19897.3
Q63159	Q63159	COQ3_RAT	Coq3	Ubiquinone biosynthesis O-methyltransferase, mitochondrial	1	ILDVGCGGGLLTEPLGR	ILDVGC(UniMod:4)GGGLLTEPLGR	2	ILDVGC(UniMod:4)GGGLLTEPLGR2	11369.7	9406.69	3841.21
D3ZY44	D3ZY44	D3ZY44_RAT	Mrps2	Mitochondrial ribosomal protein S2	1	ILDVPLQHSDFFNVK	ILDVPLQHSDFFNVK	3	ILDVPLQHSDFFNVK3		13965.9	
Q66H84	Q66H84	MAPK3_RAT	Mapkapk3	MAP kinase-activated protein kinase 3	1	ILDVYENMHHGK	ILDVYENMHHGK	3	ILDVYENMHHGK3	11616.4		10351.7
Q9EQS0	Q9EQS0	TALDO_RAT	Taldo1	Transaldolase	1	ILDWHVANTDK	ILDWHVANTDK	3	ILDWHVANTDK3	9152.92	5916.98	5713.75
P40190	P40190	IL6RB_RAT	Il6st	Interleukin-6 receptor subunit beta	1	ILDYEVVLTQSK	ILDYEVVLTQSK	2	ILDYEVVLTQSK2	1497.31	2802	
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	ILDYSCSQDR	ILDYSC(UniMod:4)SQDR	2	ILDYSC(UniMod:4)SQDR2	31423.5	24628.5	25808.7
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	ILDYSCSQDRDTQK	ILDYSC(UniMod:4)SQDRDTQK	2	ILDYSC(UniMod:4)SQDRDTQK2	3497.62		2543.33
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	ILDYSCSQDRDTQK	ILDYSC(UniMod:4)SQDRDTQK	3	ILDYSC(UniMod:4)SQDRDTQK3	152217	192956	136748
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	ILEAHQNVAQLSLTEAQLR	ILEAHQNVAQLSLTEAQLR	3	ILEAHQNVAQLSLTEAQLR3	803116	814665	961351
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	ILEAHQNVAQLSLTEAQLR	ILEAHQNVAQLSLTEAQLR	4	ILEAHQNVAQLSLTEAQLR4	6748.38	10037.1	6645.38
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	ILEALASSADAHK	ILEALASSADAHK	2	ILEALASSADAHK2	9362.78	3805.79	7329.52
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	ILEALASSADAHK	ILEALASSADAHK	3	ILEALASSADAHK3	18238.5	23665.2	18367.5
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	ILEAPDFYVQMK	ILEAPDFYVQMK	2	ILEAPDFYVQMK2	31524.4	26210.4	27848.2
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	ILEAWEANDNTQAAGGMR	ILEAWEANDNTQAAGGMR	2	ILEAWEANDNTQAAGGMR2	5960.63	4771.22	5267.71
A0A0G2KAF4	A0A0G2KAF4	A0A0G2KAF4_RAT	Nfxl1	Nuclear transcription factor, X-box binding-like 1	1	ILECGIHR	ILEC(UniMod:4)GIHR	2	ILEC(UniMod:4)GIHR2		5270.61	4778.23
A0A8I6GEV9	A0A8I6GEV9	A0A8I6GEV9_RAT	Abce1	ATP binding cassette subfamily E member 1	1	ILEDDLK	ILEDDLK	2	ILEDDLK2		43679.7	
B5DEP5	B5DEP5	B5DEP5_RAT	Trip4	Thyroid hormone receptor interactor 4	1	ILEDENPLAEYHSR	ILEDENPLAEYHSR	3	ILEDENPLAEYHSR3	10493.1	9250.67	22482.5
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	ILEDLDSLGVLVCYMHNQNHSTK	ILEDLDSLGVLVC(UniMod:4)YMHNQNHSTK	4	ILEDLDSLGVLVC(UniMod:4)YMHNQNHSTK4	27698.9	19856.1	7473.72
P49432	P49432	ODPB_RAT	Pdhb	Pyruvate dehydrogenase E1 component subunit beta, mitochondrial	1	ILEDNSIPQVK	ILEDNSIPQVK	2	ILEDNSIPQVK2	142460	130838	139927
P85971	P85971	6PGL_RAT	Pgls	6-phosphogluconolactonase	1	ILEDQESALPAAMVQPR	ILEDQESALPAAMVQPR	2	ILEDQESALPAAMVQPR2	11299.9		4870.38
P85971	P85971	6PGL_RAT	Pgls	6-phosphogluconolactonase	1	ILEDQESALPAAMVQPR	ILEDQESALPAAMVQPR	3	ILEDQESALPAAMVQPR3	11486	16828.4	7827.81
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	ILEDTQFVDGYK	ILEDTQFVDGYK	2	ILEDTQFVDGYK2	36359.7	42150.1	36791.1
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	ILEEFRK	ILEEFRK	2	ILEEFRK2	18356.8	13165.3	9392.25
B0K019	B0K019	BAG1_RAT	Bag1	BAG family molecular chaperone regulator 1	1	ILEEIDTMVLPENFK	ILEEIDTMVLPENFK	2	ILEEIDTMVLPENFK2	19823	13237.7	9255.26
D3ZXJ5	D3ZXJ5	D3ZXJ5_RAT	Efl1	Elongation factor like GTPase 1	1	ILEENSDLIR	ILEENSDLIR	2	ILEENSDLIR2	13277.6	5733.04	9048.5
B1WBT4	B1WBT4	B1WBT4_RAT	Srpk2	SRSF protein kinase 2	1	ILEENTTSAEASSEQDGECQPEVK	ILEENTTSAEASSEQDGEC(UniMod:4)QPEVK	3	ILEENTTSAEASSEQDGEC(UniMod:4)QPEVK3	1665.09		4851.26
P49806	P49806	RGS10_RAT	Rgs10	Regulator of G-protein signaling 10	1	ILEEPHPLMFQK	ILEEPHPLMFQK	2	ILEEPHPLMFQK2	11147.3	8975.08	7947.09
P49806	P49806	RGS10_RAT	Rgs10	Regulator of G-protein signaling 10	1	ILEEPHPLMFQK	ILEEPHPLMFQK	3	ILEEPHPLMFQK3	58042.5	60850.5	60886.1
B5DF65	B5DF65	B5DF65_RAT	Blvrb	Biliverdin reductase B	1	ILEESGLK	ILEESGLK	2	ILEESGLK2	37209.1	40560.2	29177.3
Q9ES71	Q9ES71	GNPAT_RAT	Gnpat	Dihydroxyacetone phosphate acyltransferase	1	ILEESLYAYELLGIPKPK	ILEESLYAYELLGIPKPK	3	ILEESLYAYELLGIPKPK3	6834.69	7242.34	10545.7
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	ILEEVMEK	ILEEVMEK	2	ILEEVMEK2	661629	634419	620003
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	ILEEVMEKETYK	ILEEVMEKETYK	3	ILEEVMEKETYK3	125899	184674	223169
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	ILEEWFGR	ILEEWFGR	2	ILEEWFGR2	72255.4	58085.5	82011.3
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	ILEFFGLK	ILEFFGLK	1	ILEFFGLK1	17969.4	18578.6	9727.05
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	ILEFFGLK	ILEFFGLK	2	ILEFFGLK2	2.68161e+06	2.68885e+06	2.90838e+06
B1WBX5	B1WBX5	B1WBX5_RAT	Slc43a1	Solute carrier family 43 member 1	1	ILEFLVTGGK	ILEFLVTGGK	2	ILEFLVTGGK2	14344.1		11995.2
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	ILEFYSK	ILEFYSK	2	ILEFYSK2	59771.3	49738.7	41765.9
A0A8I6AM66	A0A8I6AM66	A0A8I6AM66_RAT	Cdh15	Cadherin 15	1	ILEGAIPGTFVTR	ILEGAIPGTFVTR	2	ILEGAIPGTFVTR2	22069	20777.8	19829.1
Q0D2L2	Q0D2L2	Q0D2L2_RAT	Mrps22	Mitochondrial ribosomal protein S22	1	ILEGTETNK	ILEGTETNK	2	ILEGTETNK2	18036.7	18036.6	20563.6
P0C548	P0C548	PLPL2_RAT	Pnpla2	Patatin-like phospholipase domain-containing protein 2	1	ILEHLPAR	ILEHLPAR	2	ILEHLPAR2	2543.23		
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	ILEIGLAYVNHLVER	ILEIGLAYVNHLVER	3	ILEIGLAYVNHLVER3	8518.98	6618.35	6700.44
P86182	P86182	CCD22_RAT	Ccdc22	Coiled-coil domain-containing protein 22	1	ILEIVGNIR	ILEIVGNIR	2	ILEIVGNIR2	36404.5	38874.6	43006.1
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	ILELEDDIQTMSDK	ILELEDDIQTMSDK	2	ILELEDDIQTMSDK2	39401.9	29681.4	13429.4
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	ILELEEENDR	ILELEEENDR	2	ILELEEENDR2	5578.37	3117.16	10517.4
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	ILELEEENDRLR	ILELEEENDRLR	3	ILELEEENDRLR3	81053.5	78142.1	59575.8
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	ILELEQK	ILELEQK	2	ILELEQK2	294706		
F7EYC4	F7EYC4	F7EYC4_RAT	Tom1	Target of myb1 membrane trafficking protein	1	ILELIPR	ILELIPR	2	ILELIPR2	117889		
D3ZGI8	D3ZGI8	D3ZGI8_RAT	Mrm2	Mitochondrial rRNA methyltransferase 2	1	ILELLPR	ILELLPR	2	ILELLPR2	138769	98755.9	113406
E9PT66	E9PT66	E9PT66_RAT	Sf3b3	Splicing factor 3b, subunit 3	1	ILELLRPDPNTGK	ILELLRPDPNTGK	3	ILELLRPDPNTGK3	24162.1	18380.1	10992.4
G3V6W5	G3V6W5	G3V6W5_RAT	Ifih1	RNA helicase	1	ILELQVQSILEK	ILELQVQSILEK	2	ILELQVQSILEK2	6618.9	4957.43	6983.51
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	ILEMAQANSAGISDTVSR	ILEMAQANSAGISDTVSR	2	ILEMAQANSAGISDTVSR2	2844.8	1936.68	
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	ILEMDPSNVQGK	ILEMDPSNVQGK	2	ILEMDPSNVQGK2	27617.5	34177.7	41572.2
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	ILEMEGK	ILEMEGK	1	ILEMEGK1	2818.6	1530.42	2499.34
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	ILEMEGK	ILEMEGK	2	ILEMEGK2	512593	483427	577602
Q5M834	Q5M834	DTBP1_RAT	Dtnbp1	Dysbindin	1	ILEMEHTQQLK	ILEMEHTQQLK	3	ILEMEHTQQLK3	31084.4	43462.4	28277.9
A0A0G2JWA3	A0A0G2JWA3	A0A0G2JWA3_RAT	Xpo7	Exportin 7	1	ILENPQSLSDPNNYHEFCR	ILENPQSLSDPNNYHEFC(UniMod:4)R	3	ILENPQSLSDPNNYHEFC(UniMod:4)R3	5749.16	4591.7	3717.06
O88277	O88277	FAT2_RAT	Fat2	Protocadherin Fat 2	1	ILEPEALK	ILEPEALK	2	ILEPEALK2	14878.4	7085.39	11572.1
Q4FZT0	Q4FZT0	STML2_RAT	Stoml2	Stomatin-like protein 2, mitochondrial	1	ILEPGLNVLIPVLDR	ILEPGLNVLIPVLDR	2	ILEPGLNVLIPVLDR2	17632.2	20736.4	15716.3
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	ILEPHVIAVR	ILEPHVIAVR	3	ILEPHVIAVR3	161379	156646	180142
Q9QYW3	Q9QYW3	PHOCN_RAT	Mob4	MOB-like protein phocein	1	ILEPPEGQDEGVWK	ILEPPEGQDEGVWK	2	ILEPPEGQDEGVWK2	625663	550291	676372
Q9QYW3	Q9QYW3	PHOCN_RAT	Mob4	MOB-like protein phocein	1	ILEPPEGQDEGVWK	ILEPPEGQDEGVWK	3	ILEPPEGQDEGVWK3	20520.5	12560.5	8377.18
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	ILEPTAFQEPPPKPSRPK	ILEPTAFQEPPPKPSRPK	3	ILEPTAFQEPPPKPSRPK3	14868.8	21198.2	9516.66
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	ILEPTAFQEPPPKPSRPK	ILEPTAFQEPPPKPSRPK	4	ILEPTAFQEPPPKPSRPK4	47136.7	69558.1	86349.5
A0A8I6AM26	A0A8I6AM26	A0A8I6AM26_RAT	Srrt	Arsenite-resistance protein 2	1	ILEQEEEEEQAGK	ILEQEEEEEQAGK	2	ILEQEEEEEQAGK2			1911.34
Q6AYG5	Q6AYG5	ECHD1_RAT	Echdc1	Ethylmalonyl-CoA decarboxylase	1	ILEQFPGGSIDLQK	ILEQFPGGSIDLQK	2	ILEQFPGGSIDLQK2	50768.7	42712.6	49699.2
Q62784	Q62784	INP4A_RAT	Inpp4a	Inositol polyphosphate-4-phosphatase type I A	1	ILEQMAESVLSLHVPR	ILEQMAESVLSLHVPR	3	ILEQMAESVLSLHVPR3	5152.61	4824.43	8599.56
Q9WVC0	Q9WVC0;A0A8I6ARI4	SEPT7_RAT	Septin7	Septin-7	0	ILEQQNSSR	ILEQQNSSR	2	ILEQQNSSR2		170914	
A0A8I5YCC9	A0A8I5YCC9	A0A8I5YCC9_RAT	Itga5	Integrin subunit alpha 5	1	ILESSLYSEEPVEYK	ILESSLYSEEPVEYK	2	ILESSLYSEEPVEYK2	12042.3	2960.34	12888.9
P20909	P20909	COBA1_RAT	Col11a1	Collagen alpha-1(XI) chain	1	ILETDVFQGDIQQFLITGDPK	ILETDVFQGDIQQFLITGDPK	3	ILETDVFQGDIQQFLITGDPK3	14076.7	17433.3	23088.6
D4A3I5	D4A3I5	D4A3I5_RAT	Fhip2a	FHF complex subunit HOOK interacting protein 2A	1	ILETLYTLGK	ILETLYTLGK	2	ILETLYTLGK2	32152.5	38896.7	41370.3
Q9JKC9	Q9JKC9	SYNRG_RAT	Synrg	Synergin gamma	1	ILETTMTPTGIDTAK	ILETTMTPTGIDTAK	2	ILETTMTPTGIDTAK2	11936.5	2456.39	6884.19
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	ILETTTFFQR	ILETTTFFQR	2	ILETTTFFQR2	218056	211538	211818
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	ILETWGELLSK	ILETWGELLSK	2	ILETWGELLSK2	189257	227790	206694
B4F7E7	B4F7E7	PALS1_RAT	Pals1	Protein PALS1	1	ILEVEDLFSSLK	ILEVEDLFSSLK	2	ILEVEDLFSSLK2	18387.3	19680.3	18890.7
P63036	P63036	DNJA1_RAT	Dnaja1	DnaJ homolog subfamily A member 1	1	ILEVHIDK	ILEVHIDK	2	ILEVHIDK2	17084.4	11235.3	13422.9
O35824	O35824	DNJA2_RAT	Dnaja2	DnaJ homolog subfamily A member 2	1	ILEVHVDK	ILEVHVDK	2	ILEVHVDK2	43871.8	35238	27852.9
Q8K4V4	Q8K4V4	SNX27_RAT	Snx27	Sorting nexin-27	1	ILEVNGVNVEGATHK	ILEVNGVNVEGATHK	3	ILEVNGVNVEGATHK3	18191	13457.2	11338
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	ILEVVAVFDSVQMAVSR	ILEVVAVFDSVQMAVSR	3	ILEVVAVFDSVQMAVSR3	22533		
P11240	P11240;A0A8I6A0L0	COX5A_RAT	Cox5a	Cytochrome c oxidase subunit 5A, mitochondrial	0	ILEVVKDK	ILEVVKDK	2	ILEVVKDK2	98872.6	98516.6	88352.1
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	ILEVVNQVQDEER	ILEVVNQVQDEER	2	ILEVVNQVQDEER2	775027	834113	828288
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	ILEVVNQVQDEER	ILEVVNQVQDEER	3	ILEVVNQVQDEER3	46958	63091.9	66940.7
A0A8I5YCC9	A0A8I5YCC9	A0A8I5YCC9_RAT	Itga5	Integrin subunit alpha 5	1	ILEYAPCR	ILEYAPC(UniMod:4)R	2	ILEYAPC(UniMod:4)R2	23370.6	20050.5	12441.3
P10252	P10252	CD48_RAT	Cd48	CD48 antigen	1	ILEYFPNGKK	ILEYFPNGKK	3	ILEYFPNGKK3	9757.61	8222.6	12254.8
F1LMQ3	F1LMQ3	F1LMQ3_RAT	Psmd8	26S proteasome non-ATPase regulatory subunit 8	1	ILFAEATR	ILFAEATR	2	ILFAEATR2	207849	175724	197432
D3ZKG1	D3ZKG1	D3ZKG1_RAT	Mmut	Methylmalonyl-CoA mutase, mitochondrial	1	ILFDGIPLEK	ILFDGIPLEK	2	ILFDGIPLEK2	24845.5	38367.4	23823.9
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	ILFEFAK	ILFEFAK	2	ILFEFAK2	22228.2	20922.4	25029.1
Q8CGS4	Q8CGS4	CHMP3_RAT	Chmp3	Charged multivesicular body protein 3	1	ILFEITAGALGK	ILFEITAGALGK	2	ILFEITAGALGK2	136601	147139	126017
Q5M7T2	Q5M7T2	SPRY7_RAT	Spryd7	SPRY domain-containing protein 7	1	ILFEQQIF	ILFEQQIF	2	ILFEQQIF2	6509.45	13292.3	12804.7
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	ILFEVFDENR	ILFEVFDENR	2	ILFEVFDENR2	328305	355046	321631
F1LMQ3	F1LMQ3;A0A8I6ADL0	F1LMQ3_RAT	Psmd8	26S proteasome non-ATPase regulatory subunit 8	0	ILFFSTPK	ILFFSTPK	2	ILFFSTPK2	196308	186685	217655
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	ILFHGEGDQEPELEPGDVIIVLDQK	ILFHGEGDQEPELEPGDVIIVLDQK	3	ILFHGEGDQEPELEPGDVIIVLDQK3	79956.2	95258.5	99791.5
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	ILFIFIDSDHTDNQR	ILFIFIDSDHTDNQR	2	ILFIFIDSDHTDNQR2	68829	60866	68409.4
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	ILFIFIDSDHTDNQR	ILFIFIDSDHTDNQR	3	ILFIFIDSDHTDNQR3	1.61435e+06	1.57697e+06	1.54114e+06
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	ILFIFIDSDHTDNQRILEFFGLK	ILFIFIDSDHTDNQRILEFFGLK	4	ILFIFIDSDHTDNQRILEFFGLK4	4135.38	2304.22	1986.18
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	ILFLDVLFPLVVDK	ILFLDVLFPLVVDK	2	ILFLDVLFPLVVDK2	4334.05		
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	ILFLGAGEAALGIAK	ILFLGAGEAALGIAK	2	ILFLGAGEAALGIAK2	12498.3	12180	8490.52
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	ILFQDYHSFVTHGCTVDNPVLER	ILFQDYHSFVTHGC(UniMod:4)TVDNPVLER	4	ILFQDYHSFVTHGC(UniMod:4)TVDNPVLER4	22827.5	20999.5	20033.6
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	ILFQETR	ILFQETR	2	ILFQETR2	208216	256488	223690
P67779	P67779;A0A8I5ZUY9	PHB1_RAT	Phb1	Prohibitin 1	0	ILFRPVASQLPR	ILFRPVASQLPR	3	ILFRPVASQLPR3	337297	383629	384353
D3ZL95	D3ZL95	D3ZL95_RAT	Usp40	ubiquitinyl hydrolase 1	1	ILFSALETSLVGTSGHDLIHR	ILFSALETSLVGTSGHDLIHR	4	ILFSALETSLVGTSGHDLIHR4	4190.41	6313.3	
Q5XIB4	Q5XIB4	UFSP2_RAT	Ufsp2	Ufm1-specific protease 2	1	ILFVNQGSEMASQGR	ILFVNQGSEMASQGR	2	ILFVNQGSEMASQGR2	13262	23722.6	16550.8
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	ILFYDSEQDKEQSNPYMVLDIDK	ILFYDSEQDKEQSNPYMVLDIDK	3	ILFYDSEQDKEQSNPYMVLDIDK3	27789.8	25821.3	25976.9
A0A140UHX9	A0A140UHX9	A0A140UHX9_RAT	Ccz1	CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated	1	ILFYHPNEVEK	ILFYHPNEVEK	3	ILFYHPNEVEK3	47180.3	38019.3	47985.3
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ILGADLIFACGETEKPEVK	ILGADLIFAC(UniMod:4)GETEKPEVK	3	ILGADLIFAC(UniMod:4)GETEKPEVK3	43106	38120.9	44176.2
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	ILGADTSVDLEETGR	ILGADTSVDLEETGR	2	ILGADTSVDLEETGR2	450384	388257	424279
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	ILGADTSVDLEETGR	ILGADTSVDLEETGR	3	ILGADTSVDLEETGR3	10721.6		7477.44
Q03343	Q04400;Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	0	ILGDCYYCVSGLPEAR	ILGDC(UniMod:4)YYC(UniMod:4)VSGLPEAR	2	ILGDC(UniMod:4)YYC(UniMod:4)VSGLPEAR2	119200	115854	120135
Q03343	Q04400;Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	0	ILGDCYYCVSGLPEAR	ILGDC(UniMod:4)YYC(UniMod:4)VSGLPEAR	3	ILGDC(UniMod:4)YYC(UniMod:4)VSGLPEAR3	30880.9	42615.9	44921.2
A0A140UHX9	A0A140UHX9	A0A140UHX9_RAT	Ccz1	CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated	1	ILGDINSDFTR	ILGDINSDFTR	2	ILGDINSDFTR2	62425.6	61757.4	64101.8
A0A140UHX9	A0A140UHX9	A0A140UHX9_RAT	Ccz1	CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated	1	ILGDINSDFTRADEDEEIIVK	ILGDINSDFTRADEDEEIIVK	3	ILGDINSDFTRADEDEEIIVK3	7057.62	5477.64	11152.7
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	ILGDMKPVDNFDLVLFGSQVQSWK	ILGDMKPVDNFDLVLFGSQVQSWK	3	ILGDMKPVDNFDLVLFGSQVQSWK3	809607	1.07292e+06	991744
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	ILGDMKPVDNFDLVLFGSQVQSWK	ILGDMKPVDNFDLVLFGSQVQSWK	4	ILGDMKPVDNFDLVLFGSQVQSWK4	1.30992e+06	1.48407e+06	1.22193e+06
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	ILGDPEALR	ILGDPEALR	2	ILGDPEALR2	406322	338138	281174
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	ILGDPEALRDLLNNHILK	ILGDPEALRDLLNNHILK	3	ILGDPEALRDLLNNHILK3	21806.4	43668	38068.1
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	ILGDPEALRDLLNNHILK	ILGDPEALRDLLNNHILK	4	ILGDPEALRDLLNNHILK4	30813.8	67029.6	82296.2
P52020	P52020	ERG1_RAT	Sqle	Squalene monooxygenase	1	ILGECLQPGGYR	ILGEC(UniMod:4)LQPGGYR	2	ILGEC(UniMod:4)LQPGGYR2	1490.51		
Q9JK66	Q9JK66	PRKN_RAT	Prkn	E3 ubiquitin-protein ligase parkin	1	ILGEEQYNR	ILGEEQYNR	2	ILGEEQYNR2	13338.7	3709.83	8154.55
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	ILGEGFFGEVYEGVYTNHK	ILGEGFFGEVYEGVYTNHK	3	ILGEGFFGEVYEGVYTNHK3	21705	19162.4	12810.4
O55173	O55173	PDPK1_RAT	Pdpk1	3-phosphoinositide-dependent protein kinase 1	1	ILGEGSFSTVVLAR	ILGEGSFSTVVLAR	2	ILGEGSFSTVVLAR2	1931.51		
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	ILGENAKPNYGCQVTIQSEQEK	ILGENAKPNYGC(UniMod:4)QVTIQSEQEK	3	ILGENAKPNYGC(UniMod:4)QVTIQSEQEK3	6785.49	4968.85	5331.96
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	ILGEVEETVDIPCR	ILGEVEETVDIPC(UniMod:4)R	2	ILGEVEETVDIPC(UniMod:4)R2	5222.56	6207.67	2319.67
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	ILGEVGMK	ILGEVGMK	2	ILGEVGMK2	158860	131636	138557
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	ILGEVINALK	ILGEVINALK	2	ILGEVINALK2	85065.4	81684.5	81556.4
B2GUY0	B2GUY0	MA1B1_RAT	Man1b1	Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase	1	ILGGLLSAYHLSGDSLFLSK	ILGGLLSAYHLSGDSLFLSK	3	ILGGLLSAYHLSGDSLFLSK3	1944.92		3313.46
D3ZHR2	D3ZHR2	ABCD1_RAT	Abcd1	ATP-binding cassette sub-family D member 1	1	ILGGLWPTYSGVLYKPPPQR	ILGGLWPTYSGVLYKPPPQR	3	ILGGLWPTYSGVLYKPPPQR3	21803.9	13360.1	17708.9
P32038	P32038	CFAD_RAT	Cfd	Complement factor D	1	ILGGQEAMAHAR	ILGGQEAMAHAR	2	ILGGQEAMAHAR2	19252.6	18727.9	10647.2
P32038	P32038	CFAD_RAT	Cfd	Complement factor D	1	ILGGQEAMAHAR	ILGGQEAMAHAR	3	ILGGQEAMAHAR3	302050	269017	287266
Q71UE8	Q71UE8	NEDD8_RAT	Nedd8	NEDD8	1	ILGGSVLHLVLALR	ILGGSVLHLVLALR	3	ILGGSVLHLVLALR3	21726.8	6748.68	12268.6
Q64537	Q64537	CPNS1_RAT	Capns1	Calpain small subunit 1	1	ILGGVISAISEAAAQYNPEPPPPR	ILGGVISAISEAAAQYNPEPPPPR	3	ILGGVISAISEAAAQYNPEPPPPR3	794563	953211	880740
Q64537	Q64537	CPNS1_RAT	Capns1	Calpain small subunit 1	1	ILGGVISAISEAAAQYNPEPPPPR	ILGGVISAISEAAAQYNPEPPPPR	4	ILGGVISAISEAAAQYNPEPPPPR4	80400	80719.3	99550.1
P48450	P48450	LSS_RAT	Lss	Lanosterol synthase	1	ILGIGPDDPDLVR	ILGIGPDDPDLVR	2	ILGIGPDDPDLVR2		10339.8	8791.6
D4A5S9	D4A5S9	D4A5S9_RAT	Prpf39	Pre-mRNA processing factor 39	1	ILGIPTQLYSHHFQR	ILGIPTQLYSHHFQR	4	ILGIPTQLYSHHFQR4	2329.39	5569.48	6398.56
Q6I7R3	Q6I7R3	ISOC1_RAT	Isoc1	Isochorismatase domain-containing protein 1	1	ILGIPVIITEQYPK	ILGIPVIITEQYPK	2	ILGIPVIITEQYPK2	5430.27	2040.25	
O70377	O70377	SNP23_RAT	Snap23	Synaptosomal-associated protein 23	1	ILGLAIESQDAGIK	ILGLAIESQDAGIK	2	ILGLAIESQDAGIK2	289251	260720	271020
O70377	O70377	SNP23_RAT	Snap23	Synaptosomal-associated protein 23	1	ILGLAIESQDAGIK	ILGLAIESQDAGIK	3	ILGLAIESQDAGIK3	10941	11664.1	10682.1
Q5I0H4	Q5I0H4	TMCO1_RAT	Tmco1	Calcium load-activated calcium channel	1	ILGLAPSR	ILGLAPSR	2	ILGLAPSR2	94804.8	85354.8	80904.6
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	ILGLFIR	ILGLFIR	2	ILGLFIR2	13059.3	14640.9	13141.2
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	ILGLGDLGCNGMGIPVGK	ILGLGDLGC(UniMod:4)NGMGIPVGK	2	ILGLGDLGC(UniMod:4)NGMGIPVGK2	18519.3	18061.3	21284.4
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	ILGLGDLGVYGMGIPVGK	ILGLGDLGVYGMGIPVGK	2	ILGLGDLGVYGMGIPVGK2	23545.5	31150.5	26422.8
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	ILGLGDLGVYGMGIPVGK	ILGLGDLGVYGMGIPVGK	3	ILGLGDLGVYGMGIPVGK3	3349.77	3002.27	2993.89
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	ILGLLAAMLPPIK	ILGLLAAMLPPIK	2	ILGLLAAMLPPIK2	12812.1		
Q68FR6	A0A8I6AKG3;Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	0	ILGLLDTHLK	ILGLLDTHLK	2	ILGLLDTHLK2	625113	547161	586864
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	ILGNIVMR	ILGNIVMR	2	ILGNIVMR2	18193.4	24692.8	28578.1
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	ILGPAESDEFLAR	ILGPAESDEFLAR	2	ILGPAESDEFLAR2	101166	117261	95161.1
P62907	A0A8I6A8X9;D3Z9F6;A0A8I5Y9H0;P62907;A0A8I5ZVS9	RL10A_RAT	Rpl10a	Large ribosomal subunit protein uL1	0	ILGPGLNK	ILGPGLNK	2	ILGPGLNK2	100032	104123	93307.3
P51886	P51886	LUM_RAT	Lum	Lumican	1	ILGPLSYSK	ILGPLSYSK	1	ILGPLSYSK1	124790	86324.3	52613
P51886	P51886	LUM_RAT	Lum	Lumican	1	ILGPLSYSK	ILGPLSYSK	2	ILGPLSYSK2	3.11434e+07	3.10147e+07	3.1649e+07
P51886	P51886	LUM_RAT	Lum	Lumican	1	ILGPLSYSKIK	ILGPLSYSKIK	3	ILGPLSYSKIK3	5786.47	7762.45	7713.23
Q91V33	Q91V33	KHDR1_RAT	Khdrbs1	KH domain-containing, RNA-binding, signal transduction-associated protein 1	1	ILGPQGNTIK	ILGPQGNTIK	2	ILGPQGNTIK2	13863.1	3763.87	2779.77
G3V8Y8	G3V8Y8	G3V8Y8_RAT	Hip1	Huntingtin interacting protein 1	1	ILGSCTSLMQAIK	ILGSC(UniMod:4)TSLMQAIK	2	ILGSC(UniMod:4)TSLMQAIK2	7159.82		3923.96
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	ILGSDGAFK	ILGSDGAFK	1	ILGSDGAFK1	3043.71	2309.24	
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	ILGSDGAFK	ILGSDGAFK	2	ILGSDGAFK2	394528	332552	381599
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	ILGSDVQQIAVTK	ILGSDVQQIAVTK	2	ILGSDVQQIAVTK2	1.08696e+06	951621	997268
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	ILGSDVQQIAVTK	ILGSDVQQIAVTK	3	ILGSDVQQIAVTK3	10909.7	5530.88	5737.06
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	ILGSGVYSSSVLHGMVFK	ILGSGVYSSSVLHGMVFK	2	ILGSGVYSSSVLHGMVFK2	17129.3	14209.4	11267.9
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	ILGSGVYSSSVLHGMVFK	ILGSGVYSSSVLHGMVFK	3	ILGSGVYSSSVLHGMVFK3	151218	148232	136738
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	ILGSGVYSSSVLHGMVFKK	ILGSGVYSSSVLHGMVFKK	4	ILGSGVYSSSVLHGMVFKK4			4402.58
Q5BK26	Q5BK26	PLPL7_RAT	Pnpla7	Patatin-like phospholipase domain-containing protein 7	1	ILGSLQQGSGTGHQLGFNTASSK	ILGSLQQGSGTGHQLGFNTASSK	3	ILGSLQQGSGTGHQLGFNTASSK3	9042.37	8641.29	5862.98
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	ILGSSYLR	ILGSSYLR	2	ILGSSYLR2	114770	123081	105566
D4A731	D4A731	D4A731_RAT	Ankib1	RBR-type E3 ubiquitin transferase	1	ILGTFLFGR	ILGTFLFGR	2	ILGTFLFGR2	12681.2	12993.4	19420.4
D4A830	D4A830	D4A830_RAT	Ppa2	inorganic diphosphatase	1	ILGTLALIDQSETDWK	ILGTLALIDQSETDWK	2	ILGTLALIDQSETDWK2	8384.16	4097.07	7920.12
P03889	P03889	NU1M_RAT	Mtnd1	NADH-ubiquinone oxidoreductase chain 1	1	ILGYMQLR	ILGYMQLR	2	ILGYMQLR2	28024.4	26879	26693.3
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	ILHAELQQYLGNPQESLDR	ILHAELQQYLGNPQESLDR	3	ILHAELQQYLGNPQESLDR3	33274.7	31469.5	25842.2
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	ILHDADR	ILHDADR	2	ILHDADR2		84604.1	17969.1
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	ILHGDMIDFVCK	ILHGDMIDFVC(UniMod:4)K	2	ILHGDMIDFVC(UniMod:4)K2	5892.01	8581.51	6241.84
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	ILHGDMIDFVCK	ILHGDMIDFVC(UniMod:4)K	3	ILHGDMIDFVC(UniMod:4)K3	24343.8	17172.8	17791.5
D3ZER6	D3ZER6	D3ZER6_RAT	Tnpo2	Transportin 2	1	ILHGFKDQVGEENWQQFSEQFPPLLK	ILHGFKDQVGEENWQQFSEQFPPLLK	4	ILHGFKDQVGEENWQQFSEQFPPLLK4		5908.82	5428.51
A0A0G2K762	A0A0G2K762	A0A0G2K762_RAT	Abcf2	ATP binding cassette subfamily F member 2	1	ILHGLGFTPAMQR	ILHGLGFTPAMQR	2	ILHGLGFTPAMQR2	2997.84	2366.39	
A0A0G2K762	A0A0G2K762	A0A0G2K762_RAT	Abcf2	ATP binding cassette subfamily F member 2	1	ILHGLGFTPAMQR	ILHGLGFTPAMQR	3	ILHGLGFTPAMQR3	25005.4	19071	13725.7
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	ILHLGMEAK	ILHLGMEAK	2	ILHLGMEAK2		9260.83	3098.25
Q5XFW6	Q5XFW6	WDR6_RAT	Wdr6	WD repeat-containing protein 6	1	ILHLLAETFHHK	ILHLLAETFHHK	3	ILHLLAETFHHK3		2912.01	3062.05
D4ABY2	D3ZYY8;D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	0	ILHLLGK	ILHLLGK	2	ILHLLGK2	54811.3	54484.3	45559.9
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	ILHLLGQEGPK	ILHLLGQEGPK	2	ILHLLGQEGPK2	25651.2	22901.1	18129.7
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	ILHLLGQEGPK	ILHLLGQEGPK	3	ILHLLGQEGPK3	76502.1	60381.1	66788.1
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	ILHLLTQEALSIHGVK	ILHLLTQEALSIHGVK	3	ILHLLTQEALSIHGVK3	9106.41	7396.56	5649.86
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	ILHLLTQEALSIHGVK	ILHLLTQEALSIHGVK	4	ILHLLTQEALSIHGVK4	15189.5	8873.42	16357.1
P43884	P43884	PLIN1_RAT	Plin1	Perilipin-1	1	ILHLTPAQAVSSTK	ILHLTPAQAVSSTK	3	ILHLTPAQAVSSTK3	3994.96	7440.77	4967.62
F1LP90	A0A0G2K490;A0A8I5ZLV4;F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	0	ILHNDPEVEK	ILHNDPEVEK	2	ILHNDPEVEK2	41301.5	26644.2	29364.4
F1LP90	A0A0G2K490;A0A8I5ZLV4;F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	0	ILHNDPEVEK	ILHNDPEVEK	3	ILHNDPEVEK3	108392	94577.7	110050
F1LP90	A0A0G2K490;A0A8I5ZLV4;F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	0	ILHNDPEVEKK	ILHNDPEVEKK	2	ILHNDPEVEKK2	44841.4	20335.3	20666.7
F1LP90	A0A0G2K490;A0A8I5ZLV4;F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	0	ILHNDPEVEKK	ILHNDPEVEKK	3	ILHNDPEVEKK3	123862	61730.3	60351.5
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	ILHQEAMNASTPTMIESWLR	ILHQEAMNASTPTMIESWLR	3	ILHQEAMNASTPTMIESWLR3	48917	59394.7	49363.7
A0A0G2K9M5	A0A0G2K9M5	A0A0G2K9M5_RAT	Tbc1d8b	TBC1 domain family member 8B	1	ILHQTPDSQVYLSIACGANREEITK	ILHQTPDSQVYLSIAC(UniMod:4)GANREEITK	4	ILHQTPDSQVYLSIAC(UniMod:4)GANREEITK4			4830.4
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	ILHQTQDSQVYWTVACGSSR	ILHQTQDSQVYWTVAC(UniMod:4)GSSR	3	ILHQTQDSQVYWTVAC(UniMod:4)GSSR3	39784.2	45554.5	37989.8
Q9JID2	Q9JID2	GNA11_RAT	Gna11	Guanine nucleotide-binding protein subunit alpha-11	1	ILHSHLVDYFPEFDGPQR	ILHSHLVDYFPEFDGPQR	4	ILHSHLVDYFPEFDGPQR4	6765.8	11773	9113.99
F1M8V2	F1M8V2	F1M8V2_RAT	Ube4b	Ubiquitin conjugation factor E4	1	ILHSILLNGETR	ILHSILLNGETR	3	ILHSILLNGETR3	9097.92	9372.95	3910.64
P36876	P36876	2ABA_RAT	Ppp2r2a	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	1	ILHTAWHPK	ILHTAWHPK	2	ILHTAWHPK2	1653.3	482.348	
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	ILHTYYK	ILHTYYK	2	ILHTYYK2	20470.1	23031.9	16908.5
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	ILHVDNHIGISIAGLTADAR	ILHVDNHIGISIAGLTADAR	3	ILHVDNHIGISIAGLTADAR3	289193	239177	232481
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	ILHVDNHIGISIAGLTADAR	ILHVDNHIGISIAGLTADAR	4	ILHVDNHIGISIAGLTADAR4	590793	621719	712421
A0A8I6GBD2	A0A8I6GBD2	A0A8I6GBD2_RAT	Actr10	Actin related protein 10	1	ILHVLGSIR	ILHVLGSIR	2	ILHVLGSIR2	2724.4	1425.06	2135.61
A0A8I6GBD2	A0A8I6GBD2	A0A8I6GBD2_RAT	Actr10	Actin related protein 10	1	ILHVLGSIRDSVVEILFEQDNEEK	ILHVLGSIRDSVVEILFEQDNEEK	3	ILHVLGSIRDSVVEILFEQDNEEK3	3676.08	9845.08	2916.45
A0A8I6GBD2	A0A8I6GBD2	A0A8I6GBD2_RAT	Actr10	Actin related protein 10	1	ILHVLGSIRDSVVEILFEQDNEEK	ILHVLGSIRDSVVEILFEQDNEEK	4	ILHVLGSIRDSVVEILFEQDNEEK4		6755.98	3610.17
Q63803	Q63803	GNAS1_RAT	Gnas	Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas	1	ILHVNGFNGEGGEEDPQAAR	ILHVNGFNGEGGEEDPQAAR	3	ILHVNGFNGEGGEEDPQAAR3	1897.96	5656.33	6777.86
F7F5P9	F7F5P9	F7F5P9_RAT	G3bp2	G3BP stress granule assembly factor 2	1	ILIAKPIMFR	ILIAKPIMFR	3	ILIAKPIMFR3	51816.4	53993.1	65684.3
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	ILIANTGMDTDK	ILIANTGMDTDK	2	ILIANTGMDTDK2	95882.8	81163.7	87096.5
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	ILIANTGMDTDKIK	ILIANTGMDTDKIK	2	ILIANTGMDTDKIK2	12776.2	19451.2	13290.8
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	ILIANTGMDTDKIK	ILIANTGMDTDKIK	3	ILIANTGMDTDKIK3	330947	335336	448344
Q6UPR8	Q6UPR8	ERMP1_RAT	Ermp1	Endoplasmic reticulum metallopeptidase 1	1	ILIDSIQR	ILIDSIQR	2	ILIDSIQR2	37722.7	45269.2	43821.8
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	ILIEDSDQNLK	ILIEDSDQNLK	2	ILIEDSDQNLK2	78656.4	70741.9	71035.9
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	ILIEEWK	ILIEEWK	1	ILIEEWK1	3110.75	2333.31	1822.33
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	ILIEEWK	ILIEEWK	2	ILIEEWK2	1.19232e+06	1.13038e+06	1.19376e+06
A0A8I5ZZ05	A0A8I5ZZ05	A0A8I5ZZ05_RAT	Soga1	Suppressor of glucose, autophagy associated 1	1	ILIEPGFLFTTAKPK	ILIEPGFLFTTAKPK	3	ILIEPGFLFTTAKPK3	8936.75	6179.91	6235.82
Q5U367	Q811A3;Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	0	ILIEQNR	ILIEQNR	2	ILIEQNR2	80454.4	58032.9	58917.7
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	ILIFNIEVPITK	ILIFNIEVPITK	2	ILIFNIEVPITK2	3231.05	5736.49	
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	ILIIDEATANVDPR	ILIIDEATANVDPR	3	ILIIDEATANVDPR3	5857.28	3045.27	
Q5EB77	Q5EB77	RAB18_RAT	Rab18	Ras-related protein Rab-18	1	ILIIGESGVGK	ILIIGESGVGK	2	ILIIGESGVGK2	321944	357725	371523
P63012	P63012	RAB3A_RAT	Rab3a	Ras-related protein Rab-3A	1	ILIIGNSSVGK	ILIIGNSSVGK	2	ILIIGNSSVGK2	5215.21	9516.98	3778.14
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	ILILEMDISK	ILILEMDISK	2	ILILEMDISK2	9606.13	4709.27	2605.59
P61212	P61212	ARL1_RAT	Arl1	ADP-ribosylation factor-like protein 1	1	ILILGLDGAGK	ILILGLDGAGK	2	ILILGLDGAGK2	118027	100343	129589
Q6V7K3	Q6V7K3	S35B1_RAT	Slc35b1	Solute carrier family 35 member B1	1	ILIQFFDTAR	ILIQFFDTAR	2	ILIQFFDTAR2	18304.2	11353.4	12501.2
A0A8I6G3Q5	A0A8I6G3Q5	A0A8I6G3Q5_RAT	Uprt	Uracil phosphoribosyltransferase homolog	1	ILIQSDEETQR	ILIQSDEETQR	2	ILIQSDEETQR2	5535.8		
P00507	P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	1	ILIRPLYSNPPLNGAR	ILIRPLYSNPPLNGAR	3	ILIRPLYSNPPLNGAR3	151088	162313	180340
O08651	O08651	SERA_RAT	Phgdh	D-3-phosphoglycerate dehydrogenase	1	ILISDSLDPCCR	ILISDSLDPC(UniMod:4)C(UniMod:4)R	2	ILISDSLDPC(UniMod:4)C(UniMod:4)R2	12314.3	9450.2	15587.3
F1LN92	F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	1	ILISEAYK	ILISEAYK	2	ILISEAYK2	38090.4	32104.7	39678.8
D4A7Z0	D4A7Z0	D4A7Z0_RAT	Wdtc1	WD and tetratricopeptide repeats 1	1	ILITGAADSK	ILITGAADSK	2	ILITGAADSK2	21942.2		10632.4
Q5PQX0	Q5PQX0	UXS1_RAT	Uxs1	UDP-glucuronic acid decarboxylase 1	1	ILITGGAGFVGSHLTDK	ILITGGAGFVGSHLTDK	3	ILITGGAGFVGSHLTDK3	34501.1	35848.1	27681.6
Q6P7B4	Q6P7B4	GAK1B_RAT	Gask1b	Golgi-associated kinase 1B	1	ILITYINAHGAR	ILITYINAHGAR	3	ILITYINAHGAR3	10603.8	8220.04	8829.64
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	ILIVGGGVAGLASAGAAK	ILIVGGGVAGLASAGAAK	2	ILIVGGGVAGLASAGAAK2	47014.8	36816	33617.2
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	ILIVITDGR	ILIVITDGR	2	ILIVITDGR2	64158.5	66311.2	33963
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	ILIVITDGRK	ILIVITDGRK	2	ILIVITDGRK2	9379.1	2277.33	4230.23
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	ILIVTQTPPYMR	ILIVTQTPPYMR	2	ILIVTQTPPYMR2	4163.48	13027.3	10134
A0A1W2Q5Z7	A0A1W2Q5Z7	A0A1W2Q5Z7_RAT	St3gal1	ST3 beta-galactoside alpha-2,3-sialyltransferase 1	1	ILIYHPAFIK	ILIYHPAFIK	3	ILIYHPAFIK3	13738.5	15276.2	11666.8
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	ILKEEQELYQK	ILKEEQELYQK	3	ILKEEQELYQK3	17284	12411.4	15879.9
P19139	F7FH41;P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	0	ILKPVKK	ILKPVKK	2	ILKPVKK2			7250.78
G3V8E2	G3V8E2;A0A8I6G7M4	G3V8E2_RAT	Strip1	Striatin interacting protein 1	0	ILLAAAPTSK	ILLAAAPTSK	2	ILLAAAPTSK2	146720	177276	125709
P31000	P31000	VIME_RAT	Vim	Vimentin	1	ILLAELEQLK	ILLAELEQLK	2	ILLAELEQLK2	59701.7	40628.3	47557.3
Q5RJK9	Q5RJK9	Q5RJK9_RAT	Polr1c	DNA-directed RNA polymerases I and III subunit RPAC1	1	ILLAEVPTMAVEK	ILLAEVPTMAVEK	2	ILLAEVPTMAVEK2	3391.11	862.284	3554.05
O35826	O35826	GLCNE_RAT	Gne	Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase	1	ILLAGCPSYDK	ILLAGC(UniMod:4)PSYDK	2	ILLAGC(UniMod:4)PSYDK2	3083.28		1551.45
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	ILLANFLAQTEALMK	ILLANFLAQTEALMK	3	ILLANFLAQTEALMK3	7994.68	3466.17	1822.78
Q5XIU9	Q5XIU9	PGRC2_RAT	Pgrmc2	Membrane-associated progesterone receptor component 2	1	ILLAVNGK	ILLAVNGK	2	ILLAVNGK2	85240.8	45681.7	71856
A0A8I6GJ42	A0A8I6GJ42	A0A8I6GJ42_RAT	Helz	Helicase with zinc finger	1	ILLCENYR	ILLC(UniMod:4)ENYR	2	ILLC(UniMod:4)ENYR2			8178.47
Q4G086	Q4G086	Q4G086_RAT	Bnip3l	BCL2 interacting protein 3 like	1	ILLDAQHESGQSSSR	ILLDAQHESGQSSSR	3	ILLDAQHESGQSSSR3	45110.6	27899.4	39846.7
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	ILLDDTQSEAAR	ILLDDTQSEAAR	2	ILLDDTQSEAAR2	26717.3	23210.7	23002
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	ILLDIHIFMK	ILLDIHIFMK	3	ILLDIHIFMK3	11445.7		6416.7
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	ILLDLVEEAVADFDACIR	ILLDLVEEAVADFDAC(UniMod:4)IR	3	ILLDLVEEAVADFDAC(UniMod:4)IR3		3252.99	3514.72
Q3MIB4	Q3MIB4	LONP2_RAT	Lonp2	Lon protease homolog 2, peroxisomal	1	ILLDNDHYAMEK	ILLDNDHYAMEK	3	ILLDNDHYAMEK3	13348.4		12640.8
D3ZW40	D3ZW40	D3ZW40_RAT	Mtmr4	protein-tyrosine-phosphatase	1	ILLDPYYR	ILLDPYYR	2	ILLDPYYR2	14731.6		
D3ZYT8	D3ZYT8	D3ZYT8_RAT	Pikfyve	1-phosphatidylinositol-3-phosphate 5-kinase	1	ILLDSAQLK	ILLDSAQLK	2	ILLDSAQLK2	17226.8	12096.8	19397
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	ILLEIGAK	ILLEIGAK	2	ILLEIGAK2		75303.5	61948.1
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	ILLELLNQMDGFDQNVNVK	ILLELLNQMDGFDQNVNVK	3	ILLELLNQMDGFDQNVNVK3	36205.9	51387.3	50823.1
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	ILLENLGEASSQPSPTQFAQEAAR	ILLENLGEASSQPSPTQFAQEAAR	3	ILLENLGEASSQPSPTQFAQEAAR3	2516.26		
Q6F596	Q6F596	GGPPS_RAT	Ggps1	Geranylgeranyl pyrophosphate synthase	1	ILLEPYK	ILLEPYK	2	ILLEPYK2	45244.6	37734.2	35805.5
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	ILLEQHEK	ILLEQHEK	2	ILLEQHEK2	29408.9		
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	ILLGLGTSRPNPR	ILLGLGTSRPNPR	3	ILLGLGTSRPNPR3	44118.8	56277.1	43830.2
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	ILLGPEGVPVR	ILLGPEGVPVR	2	ILLGPEGVPVR2	12697.2	11561	3959.94
Q6DGG0	M0RB67;Q6DGG0	PPID_RAT	Ppid	Peptidyl-prolyl cis-trans isomerase D	0	ILLISEDLK	ILLISEDLK	2	ILLISEDLK2	17267.4	14717.5	12515.3
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	ILLLCVGEAGDTVQFAEYIQK	ILLLC(UniMod:4)VGEAGDTVQFAEYIQK	3	ILLLC(UniMod:4)VGEAGDTVQFAEYIQK3	203571	168337	149206
Q5FVL8	Q5FVL8	Q5FVL8_RAT	Abcb10	ATP binding cassette subfamily B member 10	1	ILLLDEATSALDAENEHLVQEALDR	ILLLDEATSALDAENEHLVQEALDR	3	ILLLDEATSALDAENEHLVQEALDR3		10020.2	12820.9
Q68FU7	Q68FU7	COQ6_RAT	Coq6	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial	1	ILLLEAGPK	ILLLEAGPK	2	ILLLEAGPK2	19648.3	22456.4	
Q7TSA0	Q7TSA0	MIRO2_RAT	Rhot2	Mitochondrial Rho GTPase 2	1	ILLLGEAQVGK	ILLLGEAQVGK	2	ILLLGEAQVGK2	15386.3	14883.7	14160.1
P37996	P37996	ARL3_RAT	Arl3	ADP-ribosylation factor-like protein 3	1	ILLLGLDNAGK	ILLLGLDNAGK	2	ILLLGLDNAGK2	7410.58	9491.09	15350.2
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	ILLLMKPSVLSR	ILLLMKPSVLSR	3	ILLLMKPSVLSR3	6712.48	12131.6	6153.19
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	ILLLNEMEK	ILLLNEMEK	2	ILLLNEMEK2	19290.3	14301.6	19906
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	ILLLQSWFR	ILLLQSWFR	2	ILLLQSWFR2	39007.5	47076.8	42092.7
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	ILLMDLNEK	ILLMDLNEK	2	ILLMDLNEK2	1.46059e+06	1.26705e+06	1.31248e+06
Q0D2L6	Q0D2L6;B2RZ38	Q0D2L6_RAT	Rragc	Ras-related GTP-binding protein	0	ILLMGLR	ILLMGLR	2	ILLMGLR2	89688.6	83132.3	65379.9
P47727	P47727	CBR1_RAT	Cbr1	Carbonyl reductase [NADPH] 1	1	ILLNACCPGWVR	ILLNAC(UniMod:4)C(UniMod:4)PGWVR	2	ILLNAC(UniMod:4)C(UniMod:4)PGWVR2	19381.9	16698.1	14508
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	ILLPDTNLLLLPAK	ILLPDTNLLLLPAK	2	ILLPDTNLLLLPAK2	11467.8	10015.9	12239.1
A0A8I6A2Y2	A0A8I6A2Y2	A0A8I6A2Y2_RAT	Srrm2	Serine/arginine repetitive matrix 2	1	ILLPNSSQDELMEVEK	ILLPNSSQDELMEVEK	2	ILLPNSSQDELMEVEK2	16935	14858.5	10481
Q6P6S5	Q6P6S5	GET1_RAT	Get1	Guided entry of tail-anchored proteins factor 1	1	ILLPTLSSFISR	ILLPTLSSFISR	2	ILLPTLSSFISR2	7247.51		7315.64
F1LQ09	F1LQ09	F1LQ09_RAT	Atl2	Atlastin GTPase 2	1	ILLQEHIR	ILLQEHIR	2	ILLQEHIR2	15695.3	7177.89	7480.44
P01026	P01026	CO3_RAT	C3	Complement C3	1	ILLQGTPVAQMAEDAVDGER	ILLQGTPVAQMAEDAVDGER	3	ILLQGTPVAQMAEDAVDGER3	97588	93465.4	74034.5
P01026	P01026	CO3_RAT	C3	Complement C3	1	ILLQGTPVAQMAEDAVDGERLK	ILLQGTPVAQMAEDAVDGERLK	3	ILLQGTPVAQMAEDAVDGERLK3	3306.76	3190.53	562.327
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	ILLQIGDIK	ILLQIGDIK	2	ILLQIGDIK2	18133.4	21772.2	22245.5
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	ILLQSDPDSGSPPR	ILLQSDPDSGSPPR	2	ILLQSDPDSGSPPR2	11392.3	8855.64	4366.22
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	ILLQSELK	ILLQSELK	2	ILLQSELK2	22358.6	22381.6	14265.3
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	ILLRNPGNQAAYEHFETMK	ILLRNPGNQAAYEHFETMK	3	ILLRNPGNQAAYEHFETMK3	2508.26		
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	ILLRNPGNQAAYEHFETMK	ILLRNPGNQAAYEHFETMK	4	ILLRNPGNQAAYEHFETMK4	7943.6	3945.39	
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	ILLSHFNWDK	ILLSHFNWDK	3	ILLSHFNWDK3	22780	17142.8	20892.4
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	ILLSHFNWDKEK	ILLSHFNWDKEK	3	ILLSHFNWDKEK3	95500.2	93656.7	62973.2
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	ILLSHFNWDKEK	ILLSHFNWDKEK	4	ILLSHFNWDKEK4	93768.5	123370	95548.5
A0A8I5Y4X4	A0A8I5Y4X4	A0A8I5Y4X4_RAT	Nub1	Negative regulator of ubiquitin-like proteins 1	1	ILLSNPHMWWLQDSDSENNSR	ILLSNPHMWWLQDSDSENNSR	3	ILLSNPHMWWLQDSDSENNSR3	23568.8	18649	28696.4
G3V7L1	G3V7L1;P11530	UTRN_RAT	Utrn	Utrophin	0	ILLSWVR	ILLSWVR	2	ILLSWVR2	472242	514406	476635
Q5M7U6	Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	1	ILLTEPPMNPTK	ILLTEPPMNPTK	2	ILLTEPPMNPTK2	1.16409e+06	1.07845e+06	1.08866e+06
P56522	P56522	ADRO_RAT	Fdxr	NADPH:adrenodoxin oxidoreductase, mitochondrial	1	ILLTPPEHLEK	ILLTPPEHLEK	3	ILLTPPEHLEK3	17041.9	19045.8	19044.8
Q4QR85	Q4QR85	MEP50_RAT	Wdr77	Methylosome protein WDR77	1	ILLWDTR	ILLWDTR	2	ILLWDTR2	120933	113053	116048
Q4QQV3	Q4QQV3;D3ZM02	F162A_RAT	Fam162a	Protein FAM162A	0	ILLWSGR	ILLWSGR	2	ILLWSGR2	75767.8	77376.6	94467.9
Q63965	Q63965	SFXN1_RAT	Sfxn1	Sideroflexin-1	1	ILMAAPGMAIPPFIMNTLEK	ILMAAPGMAIPPFIMNTLEK	3	ILMAAPGMAIPPFIMNTLEK3		8396.32	1372.1
Q4QQS6	Q4QQS6	Q4QQS6_RAT	Alg5	dolichyl-phosphate beta-glucosyltransferase	1	ILMADADGATKFPDVEK	ILMADADGATKFPDVEK	3	ILMADADGATKFPDVEK3	50956.4	62881.1	54225.8
P70580	P70580	PGRC1_RAT	Pgrmc1	Membrane-associated progesterone receptor component 1	1	ILMAINGK	ILMAINGK	2	ILMAINGK2	112573	95807.6	105322
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	ILMDKPEMSVVLK	ILMDKPEMSVVLK	3	ILMDKPEMSVVLK3	50081.2	55281.1	44110.2
P80386	P80386	AAKB1_RAT	Prkab1	5'-AMP-activated protein kinase subunit beta-1	1	ILMDSPEDADIFHTEEMK	ILMDSPEDADIFHTEEMK	3	ILMDSPEDADIFHTEEMK3	15174.1	21283.9	15098.2
P80386	P80386	AAKB1_RAT	Prkab1	5'-AMP-activated protein kinase subunit beta-1	1	ILMDSPEDADIFHTEEMKAPEK	ILMDSPEDADIFHTEEMKAPEK	3	ILMDSPEDADIFHTEEMKAPEK3	4379.9	2823.9	
P80386	P80386	AAKB1_RAT	Prkab1	5'-AMP-activated protein kinase subunit beta-1	1	ILMDSPEDADIFHTEEMKAPEK	ILMDSPEDADIFHTEEMKAPEK	4	ILMDSPEDADIFHTEEMKAPEK4	7785.99	12215.6	
P09456	P09456;P81377	KAP0_RAT	Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit	0	ILMGSTLR	ILMGSTLR	2	ILMGSTLR2	92884	80716.9	92292.5
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	ILMHHIPEQTTQLLK	ILMHHIPEQTTQLLK	3	ILMHHIPEQTTQLLK3	5540.71	12691.7	25059.6
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	ILMHHIPEQTTQLLK	ILMHHIPEQTTQLLK	4	ILMHHIPEQTTQLLK4	2078.36	2488.9	2154.69
P62332	P62332	ARF6_RAT	Arf6	ADP-ribosylation factor 6	1	ILMLGLDAAGK	ILMLGLDAAGK	2	ILMLGLDAAGK2	168956	102601	140804
A0A0G2JZH8	A0A0G2JZH8	A0A0G2JZH8_RAT	Pdhx	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	ILMPSLSPTMER	ILMPSLSPTMER	2	ILMPSLSPTMER2	45268.3	34610.3	36528.1
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	ILMQLCGQYDQPVLAVR	ILMQLC(UniMod:4)GQYDQPVLAVR	3	ILMQLC(UniMod:4)GQYDQPVLAVR3	4629.66	4473.12	6052.39
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	ILMSLSAK	ILMSLSAK	2	ILMSLSAK2	255038	250366	233535
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	ILMTLTVK	ILMTLTVK	2	ILMTLTVK2	93413.6	94531	88207.5
P84083	P61206;P84082;P84083;P61751;P84079	ARF5_RAT	Arf5	ADP-ribosylation factor 5	0	ILMVGLDAAGK	ILMVGLDAAGK	2	ILMVGLDAAGK2	669014	666808	672181
A0A8I6AL00	A0A8I6AL00	A0A8I6AL00_RAT	Ndufs8	NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial	1	ILMWTELFR	ILMWTELFR	2	ILMWTELFR2	39195.2	30691.5	37087.5
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	ILNAGAWSR	ILNAGAWSR	2	ILNAGAWSR2	33771.4		8894.97
P17955	P17955	NUP62_RAT	Nup62	Nuclear pore glycoprotein p62	1	ILNAHMDSLQWVDQSSALLQR	ILNAHMDSLQWVDQSSALLQR	3	ILNAHMDSLQWVDQSSALLQR3	12952.8	10228.3	8865.48
P21643	P21643	T23O_RAT	Tdo2	Tryptophan 2,3-dioxygenase	1	ILNAQELQSEIK	ILNAQELQSEIK	2	ILNAQELQSEIK2	2655.97	5032.55	1804.85
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	ILNCDTITQVK	ILNC(UniMod:4)DTITQVK	2	ILNC(UniMod:4)DTITQVK2	73387.9	70448.6	54861.7
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	ILNDCDCR	ILNDC(UniMod:4)DC(UniMod:4)R	2	ILNDC(UniMod:4)DC(UniMod:4)R2	22174.2	20156.2	13663
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	ILNDLLPFCR	ILNDLLPFC(UniMod:4)R	2	ILNDLLPFC(UniMod:4)R2	14900.2	14463.7	3287.92
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	ILNDLLPFCRPGPEGQLAATALQK	ILNDLLPFC(UniMod:4)RPGPEGQLAATALQK	3	ILNDLLPFC(UniMod:4)RPGPEGQLAATALQK3	45093.3	49108.6	45105.6
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	ILNEMLEVVEQR	ILNEMLEVVEQR	2	ILNEMLEVVEQR2	10757.9	7767.6	5493.69
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	ILNEMLEVVEQR	ILNEMLEVVEQR	3	ILNEMLEVVEQR3	4678.26	6683.75	6183.25
Q6IFV1	Q6IFV1;Q6IFU7	K1C14_RAT	Krt14	Keratin, type I cytoskeletal 14	0	ILNEMRDQYEK	ILNEMRDQYEK	3	ILNEMRDQYEK3	54593.7		72081.8
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	ILNGHTLTR	ILNGHTLTR	2	ILNGHTLTR2	10331	3740.47	4572.26
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	ILNHFSATK	ILNHFSATK	2	ILNHFSATK2			1673.67
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	ILNIFGVIK	ILNIFGVIK	2	ILNIFGVIK2	129461	111650	108651
P07943	Q3MHS3;P07943;P23457;A0A8I6A068;D3ZEL2;A0A8I6ASF1;Q6AYQ2;P51652;A0A8I6AEH6	ALDR_RAT	Akr1b1	Aldo-keto reductase family 1 member B1	0	ILNKPGLK	ILNKPGLK	2	ILNKPGLK2	6009.85		
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	ILNKPVGLK	ILNKPVGLK	2	ILNKPVGLK2	2846.66	3567.83	2411.38
P51794	P51794	CLCN4_RAT	Clcn4	H(+)/Cl(-) exchange transporter 4	1	ILNLSPFTVTDHTPMETVVDIFR	ILNLSPFTVTDHTPMETVVDIFR	3	ILNLSPFTVTDHTPMETVVDIFR3	7968.48	6079.27	7254.72
P29266	P29266	3HIDH_RAT	Hibadh	3-hydroxyisobutyrate dehydrogenase, mitochondrial	1	ILNMSSGR	ILNMSSGR	2	ILNMSSGR2	79477.7	83406.4	70933.3
P61131	P61131	SIA4C_RAT	St3gal4	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4	1	ILNPFFMEIAADK	ILNPFFMEIAADK	2	ILNPFFMEIAADK2		5320.95	7794.46
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	ILNPGEYR	ILNPGEYR	2	ILNPGEYR2	86827.9	67019.1	76604.9
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	ILNPMTVPR	ILNPMTVPR	2	ILNPMTVPR2	44686.9	58156.8	46042
Q68G12	Q68G12	SIAT9_RAT	St3gal5	Lactosylceramide alpha-2,3-sialyltransferase	1	ILNPVIIK	ILNPVIIK	2	ILNPVIIK2	14109.2	20444.3	15956.7
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	ILNQAQR	ILNQAQR	2	ILNQAQR2	60685	58800.4	67218.7
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	ILNSDER	ILNSDER	2	ILNSDER2	456588	544898	498926
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	ILNSFSVMPSPK	ILNSFSVMPSPK	2	ILNSFSVMPSPK2	1.14307e+07	1.28902e+07	1.3142e+07
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	ILNSFSVMPSPK	ILNSFSVMPSPK	3	ILNSFSVMPSPK3	72225.1	74679.5	58688.3
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	ILNTACQR	ILNTAC(UniMod:4)QR	2	ILNTAC(UniMod:4)QR2	442948	341300	276536
Q80YV8	Q80YV8	Q80YV8_RAT	Cxcl12	Stromal cell-derived factor 1	1	ILNTPNCALQIVAR	ILNTPNC(UniMod:4)ALQIVAR	2	ILNTPNC(UniMod:4)ALQIVAR2	16467.4	14388.2	11984.6
F1LNX8	F1LNX8	F1LNX8_RAT	Cmahp	Cytidine monophosphate-N-acetylneuraminic acid hydroxylase	1	ILNTVDCTRPNGGR	ILNTVDC(UniMod:4)TRPNGGR	3	ILNTVDC(UniMod:4)TRPNGGR3	11226.9		12007.2
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	ILNVAQGIR	ILNVAQGIR	2	ILNVAQGIR2	305588	317291	251870
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	ILNVPMSSQLAANHWNQQQAEQEER	ILNVPMSSQLAANHWNQQQAEQEER	3	ILNVPMSSQLAANHWNQQQAEQEER3	33542.2	24411.4	32323.9
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	ILNVPMSSQLAANHWNQQQAEQEER	ILNVPMSSQLAANHWNQQQAEQEER	4	ILNVPMSSQLAANHWNQQQAEQEER4	3994.78	2396.09	4707.62
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	ILNVPSTLSPSR	ILNVPSTLSPSR	2	ILNVPSTLSPSR2	280195	267757	286911
Q5HZA9	Q5HZA9	T126A_RAT	Tmem126a	Transmembrane protein 126A	1	ILNVTQAR	ILNVTQAR	2	ILNVTQAR2	18394.3	13734.3	11696.4
P97521	P97521	MCAT_RAT	Slc25a20	Mitochondrial carnitine/acylcarnitine carrier protein	1	ILNWIAPNL	ILNWIAPNL	2	ILNWIAPNL2	25083.6	14935	32383.4
A0A8I5ZQE9	A0A8I5ZQE9	A0A8I5ZQE9_RAT	Irf9	Interferon regulatory factor 9	1	ILPAGTLPTQPR	ILPAGTLPTQPR	2	ILPAGTLPTQPR2	18996.9	27662.4	21820.5
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	ILPDQFSPLNEVLK	ILPDQFSPLNEVLK	2	ILPDQFSPLNEVLK2	37649.5	42855.2	66265
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	ILPDTPQEPFALWEILNKK	ILPDTPQEPFALWEILNKK	3	ILPDTPQEPFALWEILNKK3	8370.08	13322	11654.2
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	ILPEAHQR	ILPEAHQR	2	ILPEAHQR2	81595.3	82076.6	81866.3
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	ILPEQGLMLTGSADK	ILPEQGLMLTGSADK	2	ILPEQGLMLTGSADK2	28929.8	22135.2	31312.8
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	ILPEYLSNWTMEK	ILPEYLSNWTMEK	2	ILPEYLSNWTMEK2	161894	165562	185381
B5DF93	B5DF93	PATL1_RAT	Patl1	Protein PAT1 homolog 1	1	ILPFLSTEQAADILMATAR	ILPFLSTEQAADILMATAR	3	ILPFLSTEQAADILMATAR3	2387.01	2149.7	2535.18
Q63615	Q63615	VP33A_RAT	Vps33a	Vacuolar protein sorting-associated protein 33A	1	ILPGPHFEER	ILPGPHFEER	3	ILPGPHFEER3		4154.44	
Q5BK26	Q5BK26	PLPL7_RAT	Pnpla7	Patatin-like phospholipase domain-containing protein 7	1	ILPHSEEQLGSSLASK	ILPHSEEQLGSSLASK	3	ILPHSEEQLGSSLASK3	3066.11		
D4A1A5	D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	ILPIMFPSLYR	ILPIMFPSLYR	2	ILPIMFPSLYR2	68298.3	70362.8	74323.7
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	ILPLDGLQAGYR	ILPLDGLQAGYR	2	ILPLDGLQAGYR2	35358.6	34417.7	34832.9
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	ILPLLFNLLK	ILPLLFNLLK	2	ILPLLFNLLK2	13643.9		
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	ILPLQVR	ILPLQVR	2	ILPLQVR2	32319.3	34637.9	32696.2
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	ILPNEDDKFTVQASEGVPMR	ILPNEDDKFTVQASEGVPMR	3	ILPNEDDKFTVQASEGVPMR3	15188.5	18627.6	12759.8
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	ILPNVPEVEDSTDFFK	ILPNVPEVEDSTDFFK	2	ILPNVPEVEDSTDFFK2	22617.6	20950.1	29454.9
Q6P767	Q6P767	PTTG_RAT	Pttg1ip	Pituitary tumor-transforming gene 1 protein-interacting protein	1	ILPPASLCK	ILPPASLC(UniMod:4)K	2	ILPPASLC(UniMod:4)K2	202877	132851	128315
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	ILPPEVQLPR	ILPPEVQLPR	2	ILPPEVQLPR2	295656	267737	252211
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	ILPPGLLAYLDSSDPVPEKDADR	ILPPGLLAYLDSSDPVPEKDADR	3	ILPPGLLAYLDSSDPVPEKDADR3	13677	21409.7	10698.5
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	ILPQYIFNSR	ILPQYIFNSR	2	ILPQYIFNSR2	245718	244851	245474
D4AB06	D4AB06	D4AB06_RAT	Haus5	HAUS augmin-like complex, subunit 5	1	ILPSIHQLHPTTPR	ILPSIHQLHPTTPR	4	ILPSIHQLHPTTPR4	7457.6	8347.02	6784.31
Q2QDE7	Q2QDE7	DNSL1_RAT	Dnase1l1	Deoxyribonuclease-1-like 1	1	ILPSVVLVPLHTTPK	ILPSVVLVPLHTTPK	3	ILPSVVLVPLHTTPK3	9140.9		8557.27
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	ILPTPPAAVK	ILPTPPAAVK	2	ILPTPPAAVK2	27161	24619.4	24091.4
B2RYP8	B2RYP8	B2RYP8_RAT	Tubgcp2	Gamma-tubulin complex component	1	ILPVAASYSTVTR	ILPVAASYSTVTR	2	ILPVAASYSTVTR2	19392.3	22417.1	19845.2
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	ILPVFDEPPNPTNVEESLK	ILPVFDEPPNPTNVEESLK	3	ILPVFDEPPNPTNVEESLK3	162237	170400	183495
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	ILPVFDEPPNPTNVEESLKR	ILPVFDEPPNPTNVEESLKR	3	ILPVFDEPPNPTNVEESLKR3	483451	644759	576081
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	ILPVLCGLTVDPEK	ILPVLC(UniMod:4)GLTVDPEK	2	ILPVLC(UniMod:4)GLTVDPEK2	121365	117739	97451.2
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	ILPVSAIR	ILPVSAIR	2	ILPVSAIR2	170866	164935	149297
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	ILPYQLK	ILPYQLK	2	ILPYQLK2	22118.1	20012.1	17729.5
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	ILQAGFK	ILQAGFK	1	ILQAGFK1	3457.15	5082.93	2192.66
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	ILQAGFK	ILQAGFK	2	ILQAGFK2	714864	811980	836396
O35826	O35826	GLCNE_RAT	Gne	Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase	1	ILQALHLQFGK	ILQALHLQFGK	3	ILQALHLQFGK3	3590.84	2952.75	2080.56
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	ILQATGLPQHLCHFVFCK	ILQATGLPQHLC(UniMod:4)HFVFC(UniMod:4)K	4	ILQATGLPQHLC(UniMod:4)HFVFC(UniMod:4)K4	14472.7		11845
P68182	P68182	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	1	ILQAVEFPFLVR	ILQAVEFPFLVR	2	ILQAVEFPFLVR2	31677	31560.6	29897.4
P68182	P68182	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	1	ILQAVEFPFLVR	ILQAVEFPFLVR	3	ILQAVEFPFLVR3	2028.57	3613.3	4862.75
P27791	P27791	KAPCA_RAT	Prkaca	cAMP-dependent protein kinase catalytic subunit alpha	1	ILQAVNFPFLVK	ILQAVNFPFLVK	2	ILQAVNFPFLVK2	40110.8	45809.2	46973.9
O08651	A0A8I5ZZR2;O08651	SERA_RAT	Phgdh	D-3-phosphoglycerate dehydrogenase	0	ILQDGGLQVVEK	ILQDGGLQVVEK	2	ILQDGGLQVVEK2	9392.63	9852.08	4599.63
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	ILQDIASGNHEFSK	ILQDIASGNHEFSK	2	ILQDIASGNHEFSK2	11149.9	7575.51	6397.68
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	ILQDIASGNHEFSK	ILQDIASGNHEFSK	3	ILQDIASGNHEFSK3	31993.4	46350.7	37599.9
Q6P780	Q6P780	Q6P780_RAT	Nfkbie	NFKB inhibitor epsilon	1	ILQDQHGDTALHVACQR	ILQDQHGDTALHVAC(UniMod:4)QR	4	ILQDQHGDTALHVAC(UniMod:4)QR4	6447.41	2266.49	5980.93
Q2PQA9	P56536;Q2PQA9;Q6QLM7	KINH_RAT	Kif5b	Kinesin-1 heavy chain	0	ILQDSLGGNCR	ILQDSLGGNC(UniMod:4)R	2	ILQDSLGGNC(UniMod:4)R2	114481	120409	124212
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	ILQDYNLQILLR	ILQDYNLQILLR	2	ILQDYNLQILLR2	5857.86	4385.34	2489.83
Q63186	Q63186	EI2BD_RAT	Eif2b4	Translation initiation factor eIF-2B subunit delta	1	ILQEAWVEGR	ILQEAWVEGR	2	ILQEAWVEGR2	25944.4	22553.6	28056.4
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	ILQEDFTCR	ILQEDFTC(UniMod:4)R	2	ILQEDFTC(UniMod:4)R2	411277	522947	403166
B0BNG0	B0BNG0	EMC2_RAT	Emc2	ER membrane protein complex subunit 2	1	ILQEDPTNTAAR	ILQEDPTNTAAR	2	ILQEDPTNTAAR2	97448.4	99490.8	109095
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	ILQEGVDPK	ILQEGVDPK	2	ILQEGVDPK2	221785	198197	206531
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	ILQEHEQIK	ILQEHEQIK	2	ILQEHEQIK2	24339.2	21408.1	20501.4
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	ILQEHEQIKK	ILQEHEQIKK	3	ILQEHEQIKK3	34351.5	63427.1	54132.9
O54923	O54923	EXOC6_RAT	Exoc6	Exocyst complex component 6	1	ILQEIESTDTACVGPTLR	ILQEIESTDTAC(UniMod:4)VGPTLR	3	ILQEIESTDTAC(UniMod:4)VGPTLR3	6812.52	6268.36	2002.35
B2GUX8	B2GUX8	B2GUX8_RAT	Sh3bp5l	SH3 domain-binding protein 5	1	ILQESAR	ILQESAR	2	ILQESAR2	53470.9	56613.5	52273.9
Q32Q06	Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	1	ILQEYITQEGHK	ILQEYITQEGHK	2	ILQEYITQEGHK2	21221.5	9412.77	13047.3
Q32Q06	Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	1	ILQEYITQEGHK	ILQEYITQEGHK	3	ILQEYITQEGHK3	143443	139265	134046
P13264	P13264	GLSK_RAT	Gls	Glutaminase kidney isoform, mitochondrial	1	ILQEYQVQYTPQGDSDDGKENQTVHK	ILQEYQVQYTPQGDSDDGKENQTVHK	4	ILQEYQVQYTPQGDSDDGKENQTVHK4	13003.8	6414.9	
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	ILQFWSK	ILQFWSK	2	ILQFWSK2	75395.8	84572.6	80791.1
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	ILQGAPETLDR	ILQGAPETLDR	2	ILQGAPETLDR2	127535	136378	97102.7
A0A8I5ZV26	A0A8I5ZV26	A0A8I5ZV26_RAT	Stom	Stomatin	1	ILQGGAK	ILQGGAK	1	ILQGGAK1	25182.9	25751.3	18533.2
P97633	P97633	KC1A_RAT	Csnk1a1	Casein kinase I isoform alpha	1	ILQGGVGIPHIR	ILQGGVGIPHIR	3	ILQGGVGIPHIR3	7740.81	4875.22	5807.69
Q32KK0	Q32KK0	Q32KK0_RAT	Arsl	Arylsulfatase E	1	ILQGQGYVTGLVGK	ILQGQGYVTGLVGK	2	ILQGQGYVTGLVGK2	8395.3	5768.07	5099.85
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	ILQIAQSYLVVSDK	ILQIAQSYLVVSDK	2	ILQIAQSYLVVSDK2	41632.5	43975.6	28987.2
D3ZHW0	D3ZHW0	D3ZHW0_RAT	Dhx29	ATP-dependent RNA helicase DHX29	1	ILQIITELIK	ILQIITELIK	2	ILQIITELIK2	3303.27		3947.26
B3DMA2	B3DMA2	ACD11_RAT	Acad11	Acyl-CoA dehydrogenase family member 11	1	ILQIMCDR	ILQIMC(UniMod:4)DR	2	ILQIMC(UniMod:4)DR2	35014.4	44448.9	41655.8
A0A8I6ADN8	A0A8I6ADN8	A0A8I6ADN8_RAT	Dock10	Dedicator of cytokinesis 10	1	ILQISPEGPLQGR	ILQISPEGPLQGR	2	ILQISPEGPLQGR2	2701.01	3350.77	3158.58
P31977	P31977	EZRI_RAT	Ezr	Ezrin	1	ILQLCMGNHELYMR	ILQLC(UniMod:4)MGNHELYMR	3	ILQLC(UniMod:4)MGNHELYMR3	3414.62	9586	3967.08
D3ZPA1	D3ZPA1	D3ZPA1_RAT	Gcc1	GRIP and coiled-coil domain containing 1	1	ILQLDLENK	ILQLDLENK	2	ILQLDLENK2	9000.2	10400	9297.59
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	ILQLLPER	ILQLLPER	2	ILQLLPER2	15349.5	12128.6	8419.66
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	ILQLPLVQAEDAGR	ILQLPLVQAEDAGR	2	ILQLPLVQAEDAGR2	84493.5	67281.9	62848.2
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	ILQLVAAGAVR	ILQLVAAGAVR	2	ILQLVAAGAVR2	16430.8	21781.5	20090.9
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	ILQMEEEYIQQLCEDIIQLKPDVVITEK	ILQMEEEYIQQLC(UniMod:4)EDIIQLKPDVVITEK	4	ILQMEEEYIQQLC(UniMod:4)EDIIQLKPDVVITEK4	7493.26	7228.74	3807.85
P51635	P51635	AK1A1_RAT	Akr1a1	Aldo-keto reductase family 1 member A1	1	ILQNIQVFDFTFSPEEMK	ILQNIQVFDFTFSPEEMK	3	ILQNIQVFDFTFSPEEMK3	8119.54		3365.87
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	ILQNSHGIEEEYQDLAAALGLVK	ILQNSHGIEEEYQDLAAALGLVK	3	ILQNSHGIEEEYQDLAAALGLVK3	21262.3	54225.9	26681.3
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	ILQNSHGIEEEYQDLAAALGLVK	ILQNSHGIEEEYQDLAAALGLVK	4	ILQNSHGIEEEYQDLAAALGLVK4	4213.42	2435.2	2707.93
A0A0G2K0G9	A0A0G2K0G9	A0A0G2K0G9_RAT	Rin3	Ras and Rab interactor 3	1	ILQQEMAGMFLVCR	ILQQEMAGMFLVC(UniMod:4)R	2	ILQQEMAGMFLVC(UniMod:4)R2	2551.69		3696.7
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	ILQQIEEPLALASGALPDWCEQLTSK	ILQQIEEPLALASGALPDWC(UniMod:4)EQLTSK	3	ILQQIEEPLALASGALPDWC(UniMod:4)EQLTSK3	12055.8	13953.7	9569.97
A0A0G2KA90	A0A0G2KA90	A0A0G2KA90_RAT	Dsc1	Desmocollin 1	1	ILQQIPDHPK	ILQQIPDHPK	2	ILQQIPDHPK2	1828.82	2026.85	
A0A0G2KA90	A0A0G2KA90	A0A0G2KA90_RAT	Dsc1	Desmocollin 1	1	ILQQIPDHPK	ILQQIPDHPK	3	ILQQIPDHPK3	51441.8	42701.9	56821.9
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	ILQSSSEVGYDAMLGDFVNMVEK	ILQSSSEVGYDAMLGDFVNMVEK	3	ILQSSSEVGYDAMLGDFVNMVEK3	29720.6	26824.2	32635.6
Q6AYG5	Q6AYG5	ECHD1_RAT	Echdc1	Ethylmalonyl-CoA decarboxylase	1	ILQTGVSLYNTTHGFHEEEVKK	ILQTGVSLYNTTHGFHEEEVKK	4	ILQTGVSLYNTTHGFHEEEVKK4	5361.98	9643.71	11305.8
B5DF91	B5DF91	ELAV1_RAT	Elavl1	ELAV-like protein 1	1	ILQVSFK	ILQVSFK	2	ILQVSFK2	36166.7	32494.2	27936.8
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	ILREEGPK	ILREEGPK	2	ILREEGPK2	15044.5	3857.64	5057.64
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	ILREEGPSAFWK	ILREEGPSAFWK	3	ILREEGPSAFWK3	46294.5	43271.9	45657
P00787	P00787	CATB_RAT	Ctsb	Cathepsin B	1	ILRGENHCGIESEIVAGIPR	ILRGENHC(UniMod:4)GIESEIVAGIPR	4	ILRGENHC(UniMod:4)GIESEIVAGIPR4	14328.7	15072.1	10074.2
A0A0G2K1T3	A0A0G2K1T3	A0A0G2K1T3_RAT	Sbf2	SET binding factor 2	1	ILRPALLPGEEIVCEGLR	ILRPALLPGEEIVC(UniMod:4)EGLR	3	ILRPALLPGEEIVC(UniMod:4)EGLR3	3350.45		
A0A0G2K7U7	A0A0G2K7U7	A0A0G2K7U7_RAT	Ankrd27	Ankyrin repeat domain 27	1	ILSAMEAYHLSSDR	ILSAMEAYHLSSDR	3	ILSAMEAYHLSSDR3	7634.44	7996.64	
F7FJT3	F7FJT3	F7FJT3_RAT	Rad23a	UV excision repair protein RAD23	1	ILSDDIPIK	ILSDDIPIK	2	ILSDDIPIK2	42270.6	42521.3	31905.4
Q4KMA2	Q4KMA2	RD23B_RAT	Rad23b	UV excision repair protein RAD23 homolog B	1	ILSDDTALK	ILSDDTALK	2	ILSDDTALK2	39403.9	31599	26093.5
Q4KMA2	Q4KMA2	RD23B_RAT	Rad23b	UV excision repair protein RAD23 homolog B	1	ILSDDTALKEYK	ILSDDTALKEYK	3	ILSDDTALKEYK3	14733.9	11270.2	
Q9ES02	Q9ES02	MEPE_RAT	Mepe	Matrix extracellular phosphoglycoprotein	1	ILSDFEDSASPDLLVR	ILSDFEDSASPDLLVR	2	ILSDFEDSASPDLLVR2	7197.79	8982.91	6537.42
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	ILSDTTLWLCR	ILSDTTLWLC(UniMod:4)R	2	ILSDTTLWLC(UniMod:4)R2	37355.8	31912.6	38265.9
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	ILSDVTHSAVFGVPASK	ILSDVTHSAVFGVPASK	2	ILSDVTHSAVFGVPASK2	13464.8	12794	9344.16
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	ILSDVTHSAVFGVPASK	ILSDVTHSAVFGVPASK	3	ILSDVTHSAVFGVPASK3	145341	138874	163176
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	ILSEALETLATEHHELER	ILSEALETLATEHHELER	3	ILSEALETLATEHHELER3	25377	20257	19737.8
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	ILSEALETLATEHHELER	ILSEALETLATEHHELER	4	ILSEALETLATEHHELER4	41865	40862.6	44902.4
Q6AY63	Q6AY63	NUDT5_RAT	Nudt5	ADP-sugar pyrophosphatase	1	ILSEELISEGK	ILSEELISEGK	2	ILSEELISEGK2	32902.2	30413.1	34086.1
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	ILSEGVDHCMVK	ILSEGVDHC(UniMod:4)MVK	2	ILSEGVDHC(UniMod:4)MVK2	525.334	3301.3	
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	ILSEGVDHCMVK	ILSEGVDHC(UniMod:4)MVK	3	ILSEGVDHC(UniMod:4)MVK3	48095.2	49400.8	34251.6
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	ILSFVYPIR	ILSFVYPIR	2	ILSFVYPIR2	75389.4	80730.3	25703.7
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	ILSGNLPK	ILSGNLPK	2	ILSGNLPK2	48457	62917.7	71575.1
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	ILSGSCPDPK	ILSGSC(UniMod:4)PDPK	2	ILSGSC(UniMod:4)PDPK2	10382		15675.1
P62282	P62282	RS11_RAT	Rps11	Small ribosomal subunit protein uS17	1	ILSGVVTK	ILSGVVTK	2	ILSGVVTK2	71314.3	70535.5	92125.7
P61980	A0A8I5ZZG4;P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	ILSISADIETIGEILKK	ILSISADIETIGEILKK	3	ILSISADIETIGEILKK3	42978	34851.2	37720.2
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	ILSLAQEQIGDSPEK	ILSLAQEQIGDSPEK	2	ILSLAQEQIGDSPEK2	116047	3.15864e+07	2.75095e+07
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	ILSLAQEQIGDSPEK	ILSLAQEQIGDSPEK	3	ILSLAQEQIGDSPEK3	7.20703e+06	9.16976e+06	8.76571e+06
Q32KJ6	Q32KJ6	GALNS_RAT	Galns	N-acetylgalactosamine-6-sulfatase	1	ILSLLQNLGISK	ILSLLQNLGISK	2	ILSLLQNLGISK2	17028	15705.2	24123.2
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	ILSLVIPQSEK	ILSLVIPQSEK	2	ILSLVIPQSEK2	20018.9	15560.8	17675.5
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	ILSLVSDPESGLSVNGQLIGAK	ILSLVSDPESGLSVNGQLIGAK	3	ILSLVSDPESGLSVNGQLIGAK3	8949.98	12989.7	10858.8
Q3KR57	Q3KR57	Q3KR57_RAT	Grap2	GRB2-related adaptor protein 2	1	ILSNQEEWLK	ILSNQEEWLK	2	ILSNQEEWLK2	6642.82	7443.33	5850.31
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	ILSNVISK	ILSNVISK	2	ILSNVISK2	70552.5	90248	62487
P48004	P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	1	ILSPEEIEK	ILSPEEIEK	2	ILSPEEIEK2	5.99164e+06	5.7315e+06	6.43146e+06
Q3L7M0	Q3L7M0	GGTA1_RAT	Ggta1	N-acetyllactosaminide alpha-1,3-galactosyltransferase	1	ILSPEYCWDYHIGLPSDIK	ILSPEYC(UniMod:4)WDYHIGLPSDIK	3	ILSPEYC(UniMod:4)WDYHIGLPSDIK3	16873.6	9395.75	9383.84
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	ILSPFSQK	ILSPFSQK	2	ILSPFSQK2	38254.5	42982.5	33526.3
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	ILSPPGPEEAQR	ILSPPGPEEAQR	2	ILSPPGPEEAQR2	87928.8	84553.4	68860.5
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	ILSQVSYR	ILSQVSYR	2	ILSQVSYR2	180497	152286	126539
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	ILSSCCK	ILSSC(UniMod:4)C(UniMod:4)K	1	ILSSC(UniMod:4)C(UniMod:4)K1		8440.75	
O54923	O54923	EXOC6_RAT	Exoc6	Exocyst complex component 6	1	ILSSCLLNLIR	ILSSC(UniMod:4)LLNLIR	2	ILSSC(UniMod:4)LLNLIR2	144497	144555	111380
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	ILSSDDYGK	ILSSDDYGK	2	ILSSDDYGK2	880550	956737	915260
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	ILSSDDYGKDLTSVMR	ILSSDDYGKDLTSVMR	2	ILSSDDYGKDLTSVMR2	5786.4	9125.93	
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	ILSSDDYGKDLTSVMR	ILSSDDYGKDLTSVMR	3	ILSSDDYGKDLTSVMR3	40622.7	49427.4	43822.3
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	ILSTIDR	ILSTIDR	2	ILSTIDR2	337529	286314	314785
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	ILSVEKHPDADSLYVEK	ILSVEKHPDADSLYVEK	4	ILSVEKHPDADSLYVEK4	4675.66		8938.7
Q9WVJ4	Q9WVJ4	SYJ2B_RAT	Synj2bp	Synaptojanin-2-binding protein	1	ILSVNGQDLK	ILSVNGQDLK	2	ILSVNGQDLK2	16686.2	17773.4	14166.9
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	ILSVSELLK	ILSVSELLK	2	ILSVSELLK2	25952.4	25425.2	26744.8
D4A8G9	D4A8G9	ZFY26_RAT	Zfyve26	Zinc finger FYVE domain-containing protein 26	1	ILSYPLTVTGLTK	ILSYPLTVTGLTK	2	ILSYPLTVTGLTK2	6526.11		6082.35
A0A0G2K089	A0A0G2K089	A0A0G2K089_RAT	Dennd4c	DENN domain containing 4C	1	ILTAALTCPK	ILTAALTC(UniMod:4)PK	2	ILTAALTC(UniMod:4)PK2	2694.99	5933.57	
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	ILTCMQGMEEIRR	ILTC(UniMod:4)MQGMEEIRR	3	ILTC(UniMod:4)MQGMEEIRR3	26196.5	27899.7	31128.5
G3V6R4	G3V6R4	G3V6R4_RAT	Lrrc1	Leucine rich repeat containing 1	1	ILTCVLLPQMPSEPICQESLPR	ILTC(UniMod:4)VLLPQMPSEPIC(UniMod:4)QESLPR	3	ILTC(UniMod:4)VLLPQMPSEPIC(UniMod:4)QESLPR3	8661.43	8556.83	11789
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	ILTDEAVSGWK	ILTDEAVSGWK	2	ILTDEAVSGWK2	114738	123639	138484
A0A0G2K712	A0A0G2K712	A0A0G2K712_RAT	Tbc1d5	TBC1 domain family, member 5	1	ILTDVLFCYAR	ILTDVLFC(UniMod:4)YAR	2	ILTDVLFC(UniMod:4)YAR2	10280.2	6454.95	8252.09
D3ZG43	D3ZG43	D3ZG43_RAT	Ndufs3	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial	1	ILTDYGFEGHPFR	ILTDYGFEGHPFR	2	ILTDYGFEGHPFR2	3042.97	3373	
D3ZG43	D3ZG43	D3ZG43_RAT	Ndufs3	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial	1	ILTDYGFEGHPFR	ILTDYGFEGHPFR	3	ILTDYGFEGHPFR3	51921	52986.2	40389
D3ZG43	D3ZG43	D3ZG43_RAT	Ndufs3	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial	1	ILTDYGFEGHPFRK	ILTDYGFEGHPFRK	3	ILTDYGFEGHPFRK3	6086.63		5848.24
D3ZG43	D3ZG43	D3ZG43_RAT	Ndufs3	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial	1	ILTDYGFEGHPFRK	ILTDYGFEGHPFRK	4	ILTDYGFEGHPFRK4	4300.36	11144.4	5853.44
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	ILTEAEIDAHLVALAER	ILTEAEIDAHLVALAER	3	ILTEAEIDAHLVALAER3	26887.2	8388.11	27182.7
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	ILTEAEIDAHLVALAERD	ILTEAEIDAHLVALAERD	3	ILTEAEIDAHLVALAERD3	408112	356567	360875
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	ILTEDQDK	ILTEDQDK	2	ILTEDQDK2	36789.3	30303	29203.7
P12001	P12001	RL18_RAT	Rpl18	Large ribosomal subunit protein eL18	1	ILTFDQLALESPK	ILTFDQLALESPK	2	ILTFDQLALESPK2	32940.9	39155.5	39384
D3ZAW2	D3ZAW2	PISD_RAT	Pisd	Phosphatidylserine decarboxylase proenzyme, mitochondrial	1	ILTFGQVK	ILTFGQVK	2	ILTFGQVK2	3480.1	6901.42	
Q5PPL3	Q5PPL3	NSDHL_RAT	Nsdhl	Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating	1	ILTGLNYEAPK	ILTGLNYEAPK	2	ILTGLNYEAPK2	30879.1	28518.3	26890.5
Q9JI51	Q9JI51	VTI1A_RAT	Vti1a	Vesicle transport through interaction with t-SNAREs homolog 1A	1	ILTGMLR	ILTGMLR	2	ILTGMLR2	48361.5	64720.5	43074.1
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	ILTHSELAPLR	ILTHSELAPLR	2	ILTHSELAPLR2	79510.4	63945.4	58499.4
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	ILTHSELAPLR	ILTHSELAPLR	3	ILTHSELAPLR3	1.61062e+06	1.63699e+06	1.4831e+06
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	ILTIHPQVLSSLSQAAEK	ILTIHPQVLSSLSQAAEK	3	ILTIHPQVLSSLSQAAEK3	13487.7	6492.55	8210.96
D3ZL11	D3ZL11	D3ZL11_RAT	Rbsn	Rabenosyn, RAB effector	1	ILTLGLNQDPSPHPNTLR	ILTLGLNQDPSPHPNTLR	3	ILTLGLNQDPSPHPNTLR3	2941.88	10106.4	10843.8
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	ILTPWLFK	ILTPWLFK	2	ILTPWLFK2	10877	13245.2	17774.2
D3ZLD7	D3ZLD7	D3ZLD7_RAT	Ppp2r3a	Protein phosphatase 2, regulatory subunit B'', alpha	1	ILTSSLSEK	ILTSSLSEK	2	ILTSSLSEK2	8828.64	9365.33	7059.61
A0A0G2K542	A0A0G2K542	A0A0G2K542_RAT	Ugp2	UTP--glucose-1-phosphate uridylyltransferase	1	ILTTATSHEFEHTK	ILTTATSHEFEHTK	3	ILTTATSHEFEHTK3	27703	16724.3	15947.1
A0A0G2K542	A0A0G2K542	A0A0G2K542_RAT	Ugp2	UTP--glucose-1-phosphate uridylyltransferase	1	ILTTATSHEFEHTK	ILTTATSHEFEHTK	4	ILTTATSHEFEHTK4	28798.4	25807.1	22457.8
B2RYT0	B2RYT0	B2RYT0_RAT	Mrps21	Mitochondrial ribosomal protein S21	1	ILTTDGLIDVIK	ILTTDGLIDVIK	2	ILTTDGLIDVIK2	2510.33	5841.87	
A0A8I6ABZ7	A0A8I6ABZ7	A0A8I6ABZ7_RAT	Dhx9	RNA helicase	1	ILTTEGR	ILTTEGR	2	ILTTEGR2		50039.1	
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	ILTTEIGLHDLR	ILTTEIGLHDLR	2	ILTTEIGLHDLR2	5143.58	2166.16	
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	ILTTEIGLHDLR	ILTTEIGLHDLR	3	ILTTEIGLHDLR3	48013.7	45219.3	32508
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	ILTTEIGLHDLRK	ILTTEIGLHDLRK	3	ILTTEIGLHDLRK3	8497.25	8430.58	2375.67
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	ILTTGFSR	ILTTGFSR	2	ILTTGFSR2	1.84967e+06	1.20594e+06	1.73199e+06
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	ILVADSLSLLK	ILVADSLSLLK	2	ILVADSLSLLK2	14819.5	11794.7	15823.4
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	ILVADSLSLLKK	ILVADSLSLLKK	3	ILVADSLSLLKK3	3447.16	5508.76	1294.57
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	ILVAGDSMDSVK	ILVAGDSMDSVK	2	ILVAGDSMDSVK2	66530.8	78468.4	64267.8
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	ILVAGDTMDSVK	ILVAGDTMDSVK	2	ILVAGDTMDSVK2	73621.8	59312.4	48973
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	ILVCGGDGSVGWVLSEIDK	ILVC(UniMod:4)GGDGSVGWVLSEIDK	3	ILVC(UniMod:4)GGDGSVGWVLSEIDK3	9878.73	3388.03	3199.59
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	ILVCGGDGSVGWVLSEIDKLNLHK	ILVC(UniMod:4)GGDGSVGWVLSEIDKLNLHK	3	ILVC(UniMod:4)GGDGSVGWVLSEIDKLNLHK3	12377.4	11958.2	
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	ILVCGGDGSVGWVLSEIDKLNLHK	ILVC(UniMod:4)GGDGSVGWVLSEIDKLNLHK	4	ILVC(UniMod:4)GGDGSVGWVLSEIDKLNLHK4	72213	44485.9	39602.8
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	ILVCVQR	ILVC(UniMod:4)VQR	2	ILVC(UniMod:4)VQR2	21959.8	25299.2	24616
Q6AXS4	Q6AXS4	RENR_RAT	Atp6ap2	Renin receptor	1	ILVDALQK	ILVDALQK	2	ILVDALQK2	44712.3	41522.7	37819.4
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	ILVDLLTLAHLHVSR	ILVDLLTLAHLHVSR	4	ILVDLLTLAHLHVSR4	4729.06	6743.33	4515.47
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	ILVDNLCDMETVNK	ILVDNLC(UniMod:4)DMETVNK	2	ILVDNLC(UniMod:4)DMETVNK2	84417.4	94551.5	69598.3
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	ILVDNLCDMETVNK	ILVDNLC(UniMod:4)DMETVNK	3	ILVDNLC(UniMod:4)DMETVNK3	1351.47	9769.48	6607.23
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	ILVEDELSSPVVVFR	ILVEDELSSPVVVFR	2	ILVEDELSSPVVVFR2	41227.5	43678.8	42094.9
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	ILVEDELSSPVVVFR	ILVEDELSSPVVVFR	3	ILVEDELSSPVVVFR3	7244.63	21653.6	
A0A8I5ZQ72	A0A8I5ZQ72;A0JPN4;D4ACQ4	A0A8I5ZQ72_RAT	Zc3h12c	Zinc finger CCCH type containing 12C	0	ILVFTPSR	ILVFTPSR	2	ILVFTPSR2	15574.4	14120	17128.1
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	ILVGSFTGNMMTFK	ILVGSFTGNMMTFK	2	ILVGSFTGNMMTFK2	60477.6	51136.8	59641.4
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	ILVGTNLVR	ILVGTNLVR	2	ILVGTNLVR2	180338	182334	162473
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	ILVHLGLLTK	ILVHLGLLTK	2	ILVHLGLLTK2	2079.15	3240.58	3592.48
O08561	O08561	PI4KB_RAT	Pi4kb	Phosphatidylinositol 4-kinase beta	1	ILVISADSGMIEPVVNAVSIHQVK	ILVISADSGMIEPVVNAVSIHQVK	3	ILVISADSGMIEPVVNAVSIHQVK3		1640.16	1892.98
Q08415	Q08415	KAT1_RAT	Kyat1	Kynurenine--oxoglutarate transaminase 1	1	ILVLNTPNNPLGK	ILVLNTPNNPLGK	2	ILVLNTPNNPLGK2	2781.97		3006.83
A0A8I6ANG1	A0A8I6ANG1	A0A8I6ANG1_RAT	Asb6	Ankyrin repeat and SOCS box-containing 6	1	ILVLTELLEQK	ILVLTELLEQK	2	ILVLTELLEQK2	3986.21	6646.3	4884.28
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	ILVNSASAQK	ILVNSASAQK	2	ILVNSASAQK2	62229.5	63518.9	67285.1
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	ILVNSQYTASVFK	ILVNSQYTASVFK	2	ILVNSQYTASVFK2	27165.8	28514.6	37871.6
P08461	A0A8I6B5J2;P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	0	ILVPEGTR	ILVPEGTR	2	ILVPEGTR2	335703	270041	332637
O35162	O35162	HSP13_RAT	Hspa13	Heat shock 70 kDa protein 13	1	ILVPIQQVLK	ILVPIQQVLK	2	ILVPIQQVLK2	50396.1	42865.3	54244.6
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	ILVPVEVIKPITLK	ILVPVEVIKPITLK	2	ILVPVEVIKPITLK2	10984.4	11123.7	5499.45
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	ILVPVEVIKPITLK	ILVPVEVIKPITLK	3	ILVPVEVIKPITLK3	176610	197933	199726
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	ILVQEDRAPEHSIPEPTQTDR	ILVQEDRAPEHSIPEPTQTDR	4	ILVQEDRAPEHSIPEPTQTDR4	6736.68	4806.4	8106.06
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	ILVQLSPHDNLILSQPVSSPLPLSGGK	ILVQLSPHDNLILSQPVSSPLPLSGGK	3	ILVQLSPHDNLILSQPVSSPLPLSGGK3	36730.3	38805.2	30109.6
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	ILVQLSPHDNLILSQPVSSPLPLSGGK	ILVQLSPHDNLILSQPVSSPLPLSGGK	4	ILVQLSPHDNLILSQPVSSPLPLSGGK4		3543.94	3243.62
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	ILVQPTFSDAR	ILVQPTFSDAR	2	ILVQPTFSDAR2	32648.4	37501.9	35256.5
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	ILVQQTLNILQQLAVAMGPNVK	ILVQQTLNILQQLAVAMGPNVK	3	ILVQQTLNILQQLAVAMGPNVK3		10464.5	
O55043	O55043	ARHG7_RAT	Arhgef7	Rho guanine nucleotide exchange factor 7	1	ILVSCNNQQDLHEWVEHLQR	ILVSC(UniMod:4)NNQQDLHEWVEHLQR	4	ILVSC(UniMod:4)NNQQDLHEWVEHLQR4	10584	10549.2	4829.58
P58751	P58751	RELN_RAT	Reln	Reelin	1	ILVSDTFNK	ILVSDTFNK	2	ILVSDTFNK2	387070	466946	439873
G3V762	G3V762	G3V762_RAT	Gfus	GDP-L-fucose synthase	1	ILVTGGSGLVGR	ILVTGGSGLVGR	2	ILVTGGSGLVGR2	34923.4	28583.5	33409.1
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	ILVTHGISYLPQVDVIIVMSGGK	ILVTHGISYLPQVDVIIVMSGGK	3	ILVTHGISYLPQVDVIIVMSGGK3	15494.2	17324.1	7373.58
Q5XI22	A0A8I6AKA6;A0A0G2JUB4;Q5XI22	THIC_RAT	Acat2	Acetyl-CoA acetyltransferase, cytosolic	0	ILVTLLHTLER	ILVTLLHTLER	3	ILVTLLHTLER3	11060.5	8077.23	8007.35
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	ILVTSNDSR	ILVTSNDSR	2	ILVTSNDSR2	477249	563854	504404
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	ILVVADNNK	ILVVADNNK	2	ILVVADNNK2	166518	134492	129145
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	ILVVADNNKDGK	ILVVADNNKDGK	2	ILVVADNNKDGK2	11003	11086.5	6939.83
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	ILVVADNNKDGK	ILVVADNNKDGK	3	ILVVADNNKDGK3	93150.8	80901.6	79038.2
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	ILVVHLK	ILVVHLK	2	ILVVHLK2	15510.3	18020	9420.51
A0A8I6GK77	A0A8I6GK77	A0A8I6GK77_RAT	Bcas3	BCAS3, microtubule associated cell migration factor	1	ILVVVLQEK	ILVVVLQEK	2	ILVVVLQEK2	5581.37	6249.86	5180.08
O70540	O70540	MADCA_RAT	Madcam1	Mucosal addressin cell adhesion molecule 1	1	ILVYAFPDQLEVTPEFLVPGR	ILVYAFPDQLEVTPEFLVPGR	3	ILVYAFPDQLEVTPEFLVPGR3		5004.76	
A0A8I6AML4	A0A8I6AML4	A0A8I6AML4_RAT	Galc	Galactocerebrosidase	1	ILWENVPVK	ILWENVPVK	2	ILWENVPVK2	8476.68	7078.09	3760.57
Q2TGI9	Q2TGI9	Q2TGI9_RAT	Zdhhc21	Palmitoyltransferase	1	ILWFIPFR	ILWFIPFR	2	ILWFIPFR2	7685.91	7448.84	9477.72
A0A0G2K8Z9	D3ZM20;A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	0	ILWGNNHFFR	ILWGNNHFFR	3	ILWGNNHFFR3	33431.2	41816.7	33594
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	ILWIDAR	ILWIDAR	2	ILWIDAR2	402095	448785	435463
Q4FZU4	Q4FZU4	ATL4_RAT	Adamtsl4	ADAMTS-like protein 4	1	ILWIPAGASHLR	ILWIPAGASHLR	3	ILWIPAGASHLR3	17269.2	15005.5	11185.8
D3ZRD3	D3ZRD3	D3ZRD3_RAT	Pde6d	Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta	1	ILWQGTEDLSVPGVEHEAR	ILWQGTEDLSVPGVEHEAR	3	ILWQGTEDLSVPGVEHEAR3	17678	15364.8	11331.2
Q498R3	Q498R3	DJC10_RAT	Dnajc10	DnaJ homolog subfamily C member 10	1	ILYDILAFAK	ILYDILAFAK	2	ILYDILAFAK2	18556.4	17992.2	20516.3
D3ZHQ1	D3ZHQ1	D3ZHQ1_RAT	Dpp8	Dipeptidylpeptidase 8	1	ILYEENDESEVEIIHVTSPMLETR	ILYEENDESEVEIIHVTSPMLETR	3	ILYEENDESEVEIIHVTSPMLETR3	4060.86	1625.17	
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	ILYESHVEVSLMPPCFR	ILYESHVEVSLMPPC(UniMod:4)FR	3	ILYESHVEVSLMPPC(UniMod:4)FR3	81668	53213.3	45266.3
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	ILYIVASDPYSR	ILYIVASDPYSR	2	ILYIVASDPYSR2	47204.6	60574.2	49716.5
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	ILYLDSSEMR	ILYLDSSEMR	2	ILYLDSSEMR2	261503	204311	243924
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	ILYLINQGEHLGTTEATEAFFAMTK	ILYLINQGEHLGTTEATEAFFAMTK	3	ILYLINQGEHLGTTEATEAFFAMTK3	73375.2	68670.4	70710
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	ILYLINQGEHLGTTEATEAFFAMTK	ILYLINQGEHLGTTEATEAFFAMTK	4	ILYLINQGEHLGTTEATEAFFAMTK4	3729.52	1831.39	4136.38
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	ILYLIQAWAHAFR	ILYLIQAWAHAFR	2	ILYLIQAWAHAFR2	4667.68	4020.29	6380.53
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	ILYLIQAWAHAFR	ILYLIQAWAHAFR	3	ILYLIQAWAHAFR3	14050.1	7615.97	12186.3
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	ILYLLNQGEHFGTMEATEAFFAMTR	ILYLLNQGEHFGTMEATEAFFAMTR	3	ILYLLNQGEHFGTMEATEAFFAMTR3	3410.41	4118.98	2038.19
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	ILYLTPEQEK	ILYLTPEQEK	2	ILYLTPEQEK2	61548.4	53030.7	72815.3
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	ILYLTPEQEKDK	ILYLTPEQEKDK	2	ILYLTPEQEKDK2	56487.7	54485	39739.9
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	ILYLTPEQEKDK	ILYLTPEQEKDK	3	ILYLTPEQEKDK3	300322	282281	300348
P00406	P00406	COX2_RAT	Mtco2	Cytochrome c oxidase subunit 2	1	ILYMMDEINNPVLTVK	ILYMMDEINNPVLTVK	2	ILYMMDEINNPVLTVK2	24890.7	14612.7	16246.5
P00406	P00406	COX2_RAT	Mtco2	Cytochrome c oxidase subunit 2	1	ILYMMDEINNPVLTVK	ILYMMDEINNPVLTVK	3	ILYMMDEINNPVLTVK3	4940.88	6121.41	4922.09
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	ILYNGQSVEVDGHSMR	ILYNGQSVEVDGHSMR	3	ILYNGQSVEVDGHSMR3	12805.1	12705.8	7723.21
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	ILYSFATAFR	ILYSFATAFR	2	ILYSFATAFR2	85421.9	97928.3	61986.4
Q64119	A0A8I6G5X1;Q64119	MYL6_RAT	Myl6	Myosin light polypeptide 6	0	ILYSQCGDVMR	ILYSQC(UniMod:4)GDVMR	2	ILYSQC(UniMod:4)GDVMR2	1.40122e+07	1.52607e+07	1.49218e+07
Q64119	A0A8I6G5X1;Q64119	MYL6_RAT	Myl6	Myosin light polypeptide 6	0	ILYSQCGDVMR	ILYSQC(UniMod:4)GDVMR	3	ILYSQC(UniMod:4)GDVMR3	9763.45	9420	15614
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	ILYSWGELLGR	ILYSWGELLGR	2	ILYSWGELLGR2	11413.3	16052.4	27489.6
Q62910	Q62910	SYNJ1_RAT	Synj1	Synaptojanin-1	1	ILYTWTPGTLLHYGR	ILYTWTPGTLLHYGR	3	ILYTWTPGTLLHYGR3		5232.21	
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	IMADSGPIYDK	IMADSGPIYDK	2	IMADSGPIYDK2	2.72343e+07	100845	2.9297e+07
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	IMADSGPIYDKTYAGGR	IMADSGPIYDKTYAGGR	3	IMADSGPIYDKTYAGGR3	74331.5	63856.4	63387.6
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	IMAQMSALQK	IMAQMSALQK	2	IMAQMSALQK2	35842.4	60893.6	61515
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	IMAQMSEMQR	IMAQMSEMQR	2	IMAQMSEMQR2	16383.3	16201.6	19862.5
P51111	P51111	HD_RAT	Htt	Huntingtin	1	IMASFGNFANDNEIK	IMASFGNFANDNEIK	2	IMASFGNFANDNEIK2	31158.9	37027.4	29125.8
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	IMATSGVVAVR	IMATSGVVAVR	2	IMATSGVVAVR2	12220.9	13767	
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	IMCHLEEVGLAAR	IMC(UniMod:4)HLEEVGLAAR	2	IMC(UniMod:4)HLEEVGLAAR2	2701.38		
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	IMCHLEEVGLAAR	IMC(UniMod:4)HLEEVGLAAR	3	IMC(UniMod:4)HLEEVGLAAR3	33433.9	43045	47838.6
A0A8I6A3H1	A0A8I6A3H1	A0A8I6A3H1_RAT	Ero1b	Endoplasmic reticulum oxidoreductase 1 beta	1	IMDCVGCDK	IMDC(UniMod:4)VGC(UniMod:4)DK	2	IMDC(UniMod:4)VGC(UniMod:4)DK2	9394.88	9623.65	6927.04
Q8R4A1	Q8R4A1	ERO1A_RAT	Ero1a	ERO1-like protein alpha	1	IMDCVGCFK	IMDC(UniMod:4)VGC(UniMod:4)FK	2	IMDC(UniMod:4)VGC(UniMod:4)FK2	27006.4	21736.7	31427.5
A0A8I5ZKY1	A0A8I5ZKY1	A0A8I5ZKY1_RAT	Rnf170	E3 ubiquitin-protein ligase RNF170	1	IMDLPTLLR	IMDLPTLLR	2	IMDLPTLLR2	14904.6	9848.13	12909
Q2THW7	Q2THW7	ZDHC5_RAT	Zdhhc5	Palmitoyltransferase ZDHHC5	1	IMDNGIQGELR	IMDNGIQGELR	2	IMDNGIQGELR2	5750.94	2785.31	6196.67
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	IMDPNIVGSEHYDVAR	IMDPNIVGSEHYDVAR	2	IMDPNIVGSEHYDVAR2	81687.8	54953.3	69691.8
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	IMDPNIVGSEHYDVAR	IMDPNIVGSEHYDVAR	3	IMDPNIVGSEHYDVAR3	2.04232e+06	2.00398e+06	2.30743e+06
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	IMDQAANPQYVWDR	IMDQAANPQYVWDR	2	IMDQAANPQYVWDR2	11642.9	11860.8	14324.5
P07633	P07633	PCCB_RAT	Pccb	Propionyl-CoA carboxylase beta chain, mitochondrial	1	IMDQAITVGAPVIGLNDSGGAR	IMDQAITVGAPVIGLNDSGGAR	3	IMDQAITVGAPVIGLNDSGGAR3	10906.6	12556.2	7575.8
A0A8I6A502	A0A8I6A502	A0A8I6A502_RAT	Tns3	Tensin 3	1	IMDVGWPELHAPPLDK	IMDVGWPELHAPPLDK	3	IMDVGWPELHAPPLDK3	6055.83	18665.7	8559.08
Q5I6B8	Q5I6B8	PI51C_RAT	Pip5k1c	Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma	1	IMDYSLLLGVHNIDQQER	IMDYSLLLGVHNIDQQER	3	IMDYSLLLGVHNIDQQER3	13889.7	18727.5	14779
O88377	O88377	PI42B_RAT	Pip4k2b	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta	1	IMDYSLLVGIHDVDR	IMDYSLLVGIHDVDR	3	IMDYSLLVGIHDVDR3	3994.31	3595.05	2884.48
P14270	P14270	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	1	IMEEFFR	IMEEFFR	2	IMEEFFR2	70233.5	109922	84234.6
Q8VIL3	Q8VIL3	ZWINT_RAT	Zwint	ZW10 interactor	1	IMEEFMR	IMEEFMR	2	IMEEFMR2	108772	88241.8	108319
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	IMEEQQK	IMEEQQK	2	IMEEQQK2	38092.1		37322.2
G3V8L1	G3V8L1	G3V8L1_RAT	Pycard	PYD and CARD domain containing	1	IMEESGAVATATSVPAQGTAR	IMEESGAVATATSVPAQGTAR	3	IMEESGAVATATSVPAQGTAR3	8187.07	7967.11	10067.1
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	IMEFEIGAAPTR	IMEFEIGAAPTR	2	IMEFEIGAAPTR2	81581.4	65275.3	83716.5
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	IMEFEIGAAPTR	IMEFEIGAAPTR	3	IMEFEIGAAPTR3	3018.84	6590.05	5220
P16232	P16232	DHI1_RAT	Hsd11b1	11-beta-hydroxysteroid dehydrogenase 1	1	IMEFLSLR	IMEFLSLR	2	IMEFLSLR2	29292.2	25058.9	20298.1
P49432	P49432	ODPB_RAT	Pdhb	Pyruvate dehydrogenase E1 component subunit beta, mitochondrial	1	IMEGPAFNFLDAPAVR	IMEGPAFNFLDAPAVR	2	IMEGPAFNFLDAPAVR2	17954	17309.5	17567.6
P49432	P49432	ODPB_RAT	Pdhb	Pyruvate dehydrogenase E1 component subunit beta, mitochondrial	1	IMEGPAFNFLDAPAVR	IMEGPAFNFLDAPAVR	3	IMEGPAFNFLDAPAVR3	30146.9	25743.7	31218.2
B5DF24	B5DF24	B5DF24_RAT	Uck1	Uridine-cytidine kinase	1	IMELLGQNEVDRR	IMELLGQNEVDRR	3	IMELLGQNEVDRR3	13422.5	9244.41	17983.5
Q62918	Q62918	NELL2_RAT	Nell2	Protein kinase C-binding protein NELL2	1	IMELQDILSK	IMELQDILSK	2	IMELQDILSK2	5502.71	4701.32	7516.56
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	IMEMAAK	IMEMAAK	2	IMEMAAK2	536383	397749	566871
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	IMENGQER	IMENGQER	2	IMENGQER2	204741		179836
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	IMENGQERVEVEEDGQLK	IMENGQERVEVEEDGQLK	3	IMENGQERVEVEEDGQLK3	6137.42	4198.45	7747.93
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	IMENNLESELK	IMENNLESELK	2	IMENNLESELK2	23294.4	21201.8	29172.2
Q66H39	Q66H39	ABCF3_RAT	Abcf3	ATP-binding cassette sub-family F member 3	1	IMENYDCDTK	IMENYDC(UniMod:4)DTK	2	IMENYDC(UniMod:4)DTK2		4006.67	
D4A1A5	D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	IMEPLFR	IMEPLFR	2	IMEPLFR2	138187	99787.3	129451
Q5PQL2	Q5PQL2	CNOT9_RAT	Cnot9	CCR4-NOT transcription complex subunit 9	1	IMESGSELSK	IMESGSELSK	2	IMESGSELSK2		6382.47	
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	IMEVFLVPADPHCRPIQYR	IMEVFLVPADPHC(UniMod:4)RPIQYR	3	IMEVFLVPADPHC(UniMod:4)RPIQYR3	18556.3	26014.7	24049.7
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	IMEVFLVPADPHCRPIQYR	IMEVFLVPADPHC(UniMod:4)RPIQYR	4	IMEVFLVPADPHC(UniMod:4)RPIQYR4	104138	125664	99926.7
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	IMEVIDAITTTAQSHQR	IMEVIDAITTTAQSHQR	3	IMEVIDAITTTAQSHQR3	41816.1	40101.7	40503.2
P31325	P31325	PHKG2_RAT	Phkg2	Phosphorylase b kinase gamma catalytic chain, liver/testis isoform	1	IMEVSAER	IMEVSAER	2	IMEVSAER2	40088.2	27748.8	28778.2
Q63515	Q63515	C4BPB_RAT	C4bpb	C4b-binding protein beta chain	1	IMFECNDGYILK	IMFEC(UniMod:4)NDGYILK	2	IMFEC(UniMod:4)NDGYILK2	108996	132789	113658
Q63515	Q63515	C4BPB_RAT	C4bpb	C4b-binding protein beta chain	1	IMFECNDGYILK	IMFEC(UniMod:4)NDGYILK	3	IMFEC(UniMod:4)NDGYILK3	6211.12	11781.4	7644.88
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	IMFEVQDLK	IMFEVQDLK	2	IMFEVQDLK2	252144	309541	251081
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	IMGFVSR	IMGFVSR	2	IMGFVSR2	25283.4	22494.4	30390.6
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	IMGINYEIVVAHVSK	IMGINYEIVVAHVSK	3	IMGINYEIVVAHVSK3	3440.52	1653.96	
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	IMGIPEDEQMGLLR	IMGIPEDEQMGLLR	2	IMGIPEDEQMGLLR2	1.98976e+07	2.35364e+07	2.27644e+07
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	IMGIPEDEQMGLLR	IMGIPEDEQMGLLR	3	IMGIPEDEQMGLLR3	778841	853770	885829
A0A8I5ZKU9	A0A8I5ZKU9	A0A8I5ZKU9_RAT	Shmt1	Serine hydroxymethyltransferase	1	IMGLDLPDGGHLTHGFMTDK	IMGLDLPDGGHLTHGFMTDK	4	IMGLDLPDGGHLTHGFMTDK4	6825.04	4399.07	8741.31
A0A8I5ZKU9	A0A8I5ZKU9	A0A8I5ZKU9_RAT	Shmt1	Serine hydroxymethyltransferase	1	IMGLDLPDGGHLTHGFMTDKK	IMGLDLPDGGHLTHGFMTDKK	4	IMGLDLPDGGHLTHGFMTDKK4	4249.19		6555.85
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	IMGLDLPDGGHLTHGYMSDVK	IMGLDLPDGGHLTHGYMSDVK	3	IMGLDLPDGGHLTHGYMSDVK3	26381.5	21188.2	22754.5
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	IMGLDLPDGGHLTHGYMSDVK	IMGLDLPDGGHLTHGYMSDVK	4	IMGLDLPDGGHLTHGYMSDVK4	52334.1	55706.8	43199
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	IMGLDLPDGGHLTHGYMSDVKR	IMGLDLPDGGHLTHGYMSDVKR	4	IMGLDLPDGGHLTHGYMSDVKR4	12698.1	13952.9	12504.4
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	IMGLGLSPEEK	IMGLGLSPEEK	2	IMGLGLSPEEK2	265703	259027	292796
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	IMGPNYTPGK	IMGPNYTPGK	2	IMGPNYTPGK2	120386	116827	109698
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	IMGPNYTPGKK	IMGPNYTPGKK	3	IMGPNYTPGKK3	25364.6	27544.6	28553.9
P46844	P46844	BIEA_RAT	Blvra	Biliverdin reductase A	1	IMHCLGLASDIQK	IMHC(UniMod:4)LGLASDIQK	3	IMHC(UniMod:4)LGLASDIQK3	3278.4	6654.82	2822.28
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	IMHDVIK	IMHDVIK	2	IMHDVIK2	7678.7	10269.7	9121.43
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	IMHFPTWVDLK	IMHFPTWVDLK	3	IMHFPTWVDLK3	6904.11	7233.25	2969.62
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	IMHQTVK	IMHQTVK	1	IMHQTVK1			1495.06
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	IMHQTVK	IMHQTVK	2	IMHQTVK2			140009
D3ZYI0	D3ZYI0	D3ZYI0_RAT	Gca	Grancalcin	1	IMIAMLDR	IMIAMLDR	2	IMIAMLDR2	27537.7	9809.57	14364.6
D3ZYI0	D3ZYI0	D3ZYI0_RAT	Gca	Grancalcin	1	IMIAMLDRDYTGK	IMIAMLDRDYTGK	3	IMIAMLDRDYTGK3	53791.5	70641	68699.6
M0RAD5	M0RAD5	M0RAD5_RAT	Clpp	ATP-dependent Clp protease proteolytic subunit	1	IMIHQPSGGAR	IMIHQPSGGAR	2	IMIHQPSGGAR2	2937.31		1626.49
M0RAD5	M0RAD5	M0RAD5_RAT	Clpp	ATP-dependent Clp protease proteolytic subunit	1	IMIHQPSGGAR	IMIHQPSGGAR	3	IMIHQPSGGAR3	72777.4	55956.6	84676.9
Q9QWJ9	Q9QWJ9	NRP1_RAT	Nrp1	Neuropilin-1	1	IMINFNPHFDLEDRDCK	IMINFNPHFDLEDRDC(UniMod:4)K	4	IMINFNPHFDLEDRDC(UniMod:4)K4	15801.9	26443	10698.8
Q63450	Q63450;A0A8I6AUH0	KCC1A_RAT	Camk1	Calcium/calmodulin-dependent protein kinase type 1	0	IMISDFGLSK	IMISDFGLSK	2	IMISDFGLSK2	41332.3	41559.6	43838.3
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	IMLFIDGDRIDAPGVK	IMLFIDGDRIDAPGVK	3	IMLFIDGDRIDAPGVK3	30145.7	14962	19317.9
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	IMLLDDFTTR	IMLLDDFTTR	2	IMLLDDFTTR2	89674.1	83659.8	96215
A0A8I5ZWI8	A0A8I5ZWI8	A0A8I5ZWI8_RAT	Dnajc19	DnaJ heat shock protein family (Hsp40) member C19	1	IMLLNHPDK	IMLLNHPDK	2	IMLLNHPDK2		2344.94	
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	IMLNTPEDVQALVSGK	IMLNTPEDVQALVSGK	2	IMLNTPEDVQALVSGK2	147653	126458	116485
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	IMLNTPEDVQALVSGK	IMLNTPEDVQALVSGK	3	IMLNTPEDVQALVSGK3	15606.4	20221.4	11691.8
P62909	D3ZVH2;P62909	RS3_RAT	Rps3	Small ribosomal subunit protein uS3	0	IMLPWDPSGK	IMLPWDPSGK	2	IMLPWDPSGK2	28099.2	23508	36079.1
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	IMLSFHEEQEVLPETFLANFPSLIK	IMLSFHEEQEVLPETFLANFPSLIK	3	IMLSFHEEQEVLPETFLANFPSLIK3	2506.68	3420.53	3482.75
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	IMLSLSR	IMLSLSR	2	IMLSLSR2	31949.5	22259.5	29721
A0A8I6AFT7	A0A8I6AFT7	A0A8I6AFT7_RAT	Nadk	NAD(+) kinase	1	IMLSPEAR	IMLSPEAR	2	IMLSPEAR2	16672.8	16381.7	15957.4
B2RZB5	B2RZB5	B2RZB5_RAT	Chmp2a	Charged multivesicular body protein 2A	1	IMMEFER	IMMEFER	2	IMMEFER2	76674.5	67121.7	63229.4
B5DFC3	B5DFC3	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	1	IMMFIGGPATQGPGMVVGDELK	IMMFIGGPATQGPGMVVGDELK	3	IMMFIGGPATQGPGMVVGDELK3	842.156	2388.49	6093.14
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	IMMLSVLK	IMMLSVLK	2	IMMLSVLK2	300719	298783	305319
A0A8I6A8Q1	A0A8I6A8Q1	A0A8I6A8Q1_RAT	A2ml1	Alpha-2-macroglobulin-like 1	1	IMMYGGGGGGGAPAASAFHDAPDSISHAK	IMMYGGGGGGGAPAASAFHDAPDSISHAK	4	IMMYGGGGGGGAPAASAFHDAPDSISHAK4	25681.9	18759.3	22621.1
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	IMNEEDPEK	IMNEEDPEK	2	IMNEEDPEK2	46681.9	41613.7	26276.5
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	IMNEEDPEKQR	IMNEEDPEKQR	3	IMNEEDPEKQR3	82425.8	40272.3	110923
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	IMNGGLVSGPPPAK	IMNGGLVSGPPPAK	2	IMNGGLVSGPPPAK2	5426.71	9344.14	6644.23
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	IMNHEER	IMNHEER	2	IMNHEER2			27286.6
D3ZSM9	D3ZSM9	D3ZSM9_RAT	Brat1	BRCA1-associated ATM activator 1	1	IMNHVEESLHSK	IMNHVEESLHSK	3	IMNHVEESLHSK3	8561.79	3888.23	11160.1
B5DFD1	B5DFD1	B5DFD1_RAT	Nudcd1	NudC domain-containing protein 1	1	IMNLTVMLDTALGKPR	IMNLTVMLDTALGKPR	2	IMNLTVMLDTALGKPR2	762.602		
B5DFD1	B5DFD1	B5DFD1_RAT	Nudcd1	NudC domain-containing protein 1	1	IMNLTVMLDTALGKPR	IMNLTVMLDTALGKPR	3	IMNLTVMLDTALGKPR3	11318.4	4002.96	2855.94
A0A8I5ZW56	A0A8I5ZW56	A0A8I5ZW56_RAT	Clec16a	C-type lectin domain containing 16A	1	IMNNAAQPDGR	IMNNAAQPDGR	2	IMNNAAQPDGR2	9683.16	14489.5	14085.5
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	IMNQVFQSLR	IMNQVFQSLR	2	IMNQVFQSLR2	8435.33	10340.4	9695.59
P85108	P85108;Q4QQV0;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	IMNTFSVMPSPK	IMNTFSVMPSPK	2	IMNTFSVMPSPK2	5.45474e+06	5.80248e+06	6.24427e+06
P85108	P85108;Q4QQV0;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	IMNTFSVMPSPK	IMNTFSVMPSPK	3	IMNTFSVMPSPK3	39451.1	68145.3	62972.1
Q6P9T8	P69897;Q4QRB4;Q6P9T8;B4F7C2	TBB4B_RAT	Tubb4b	Tubulin beta-4B chain	0	IMNTFSVVPSPK	IMNTFSVVPSPK	2	IMNTFSVVPSPK2	6.0331e+06	6.70593e+06	6.67774e+06
Q6P9T8	P69897;Q4QRB4;Q6P9T8;B4F7C2	TBB4B_RAT	Tubb4b	Tubulin beta-4B chain	0	IMNTFSVVPSPK	IMNTFSVVPSPK	3	IMNTFSVVPSPK3	58976.3	54954.1	53402.1
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	IMNVIGEPIDER	IMNVIGEPIDER	2	IMNVIGEPIDER2	2.59114e+06	2.50608e+06	2.84346e+06
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	IMNVIGEPIDER	IMNVIGEPIDER	3	IMNVIGEPIDER3	29983.7	15532.6	20339.9
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	IMNVIGEPIDERGPIK	IMNVIGEPIDERGPIK	2	IMNVIGEPIDERGPIK2	1795.19	4574.65	1467.84
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	IMNVIGEPIDERGPIK	IMNVIGEPIDERGPIK	3	IMNVIGEPIDERGPIK3	37877.5	55983.9	83769.3
Q499N5	Q499N5	ACSF2_RAT	Acsf2	Medium-chain acyl-CoA ligase ACSF2, mitochondrial	1	IMPHTEAQIVNMETGELTK	IMPHTEAQIVNMETGELTK	3	IMPHTEAQIVNMETGELTK3	9624.58	3451.86	12311.8
Q9Z269	Q9Z269	VAPB_RAT	Vapb	Vesicle-associated membrane protein-associated protein B	1	IMPTSASK	IMPTSASK	1	IMPTSASK1	3950.03		
Q9Z269	Q9Z269	VAPB_RAT	Vapb	Vesicle-associated membrane protein-associated protein B	1	IMPTSASK	IMPTSASK	2	IMPTSASK2	536702	593596	387405
Q3ZU82	Q3ZU82	GOGA5_RAT	Golga5	Golgin subfamily A member 5	1	IMQDHNEGSSLQNQALQTLQER	IMQDHNEGSSLQNQALQTLQER	3	IMQDHNEGSSLQNQALQTLQER3	3347.32	8120.86	9350.54
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	IMQEEGQPLK	IMQEEGQPLK	2	IMQEEGQPLK2	18584.8	22037.5	18717.3
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	IMQEEGQPLKLPDTK	IMQEEGQPLKLPDTK	3	IMQEEGQPLKLPDTK3	59736.2	64832.5	34039.8
A0A8I5ZQZ1	A0A8I5ZQZ1	A0A8I5ZQZ1_RAT	Nufip2	Nuclear FMR1 interacting protein 2	1	IMQETSVPALK	IMQETSVPALK	2	IMQETSVPALK2	7235.74	8586.55	10345.5
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	IMQFCHTLR	IMQFC(UniMod:4)HTLR	2	IMQFC(UniMod:4)HTLR2	16219.1	14398.8	11170
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	IMQFCHTLR	IMQFC(UniMod:4)HTLR	3	IMQFC(UniMod:4)HTLR3	73061.6	71322.4	54350.4
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	IMQIHSR	IMQIHSR	2	IMQIHSR2	51984.5	33690.7	37825.2
Q6P7S1	Q6P7S1	ASAH1_RAT	Asah1	Acid ceramidase	1	IMQMVDEK	IMQMVDEK	2	IMQMVDEK2	11371.1		6247.62
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	IMQNTDPHSQEYVEHLK	IMQNTDPHSQEYVEHLK	4	IMQNTDPHSQEYVEHLK4	82921.5	98633.3	81202.3
Q03626	A0A8I6AG69;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	IMQWQDIK	IMQWQDIK	2	IMQWQDIK2	8.53385e+06	6.14024e+06	6.30921e+06
Q03626	A0A8I6AG69;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	IMQWQDIKTENGLK	IMQWQDIKTENGLK	3	IMQWQDIKTENGLK3	33853.9	23408.6	24423.2
P14046	Q6IE52;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	IMQWQDVK	IMQWQDVK	2	IMQWQDVK2	209046	178914	148824
P14046	Q6IE52;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	IMQWQDVKTENGLK	IMQWQDVKTENGLK	2	IMQWQDVKTENGLK2	22651.7	22042.9	16324.3
P14046	Q6IE52;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	IMQWQDVKTENGLK	IMQWQDVKTENGLK	3	IMQWQDVKTENGLK3	719498	644365	660305
P14046	Q6IE52;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	IMQWQDVKTENGLKQLSFSLSAEPIQGPYK	IMQWQDVKTENGLKQLSFSLSAEPIQGPYK	4	IMQWQDVKTENGLKQLSFSLSAEPIQGPYK4	169272	126594	114259
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	IMSALSQK	IMSALSQK	2	IMSALSQK2	6980.51	9190.9	
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	IMSCTPDAQCSR	IMSC(UniMod:4)TPDAQC(UniMod:4)SR	2	IMSC(UniMod:4)TPDAQC(UniMod:4)SR2	1.03736e+06	1.14886e+06	1.07331e+06
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	IMSCTPDAQCSR	IMSC(UniMod:4)TPDAQC(UniMod:4)SR	3	IMSC(UniMod:4)TPDAQC(UniMod:4)SR3	4865.03	5764.24	4691
Q9QUR2	Q9QUR2	DCTN4_RAT	Dctn4	Dynactin subunit 4	1	IMSIPNLR	IMSIPNLR	2	IMSIPNLR2	52689	47738.4	58988.5
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	IMSIVDPNR	IMSIVDPNR	2	IMSIVDPNR2	2.10143e+06	2.47753e+06	2.28557e+06
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	IMSMIDEAK	IMSMIDEAK	2	IMSMIDEAK2	1.11272e+07	1.06399e+07	1.07876e+07
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	IMSMIDEAKK	IMSMIDEAKK	2	IMSMIDEAKK2	8.54018e+06	1.06106e+07	9.91892e+06
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	IMSMIDEAKK	IMSMIDEAKK	3	IMSMIDEAKK3	85223.3	59696.4	76557.2
P12749	P12749;D4A1Z2;D4AE42	RL26_RAT	Rpl26	Large ribosomal subunit protein uL24	0	IMSSPLSK	IMSSPLSK	2	IMSSPLSK2	50267.9	41897.4	40778.4
O88658	O88658	KIF1B_RAT	Kif1b	Kinesin-like protein KIF1B	1	IMSTPGGEEAIER	IMSTPGGEEAIER	2	IMSTPGGEEAIER2	23268.6	11471.1	12673.7
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	IMSYSSDFR	IMSYSSDFR	2	IMSYSSDFR2	24752.3	33442.9	19528.9
A0A8I5ZQG6	A0A8I5ZQG6	A0A8I5ZQG6_RAT	Sez6l2	Seizure related 6 homolog like 2	1	IMTCADPGEITNGHR	IMTC(UniMod:4)ADPGEITNGHR	3	IMTC(UniMod:4)ADPGEITNGHR3	7492.31	6620.83	5086.11
F1M7L9	F1M7L9	PKP2_RAT	Pkp2	Plakophilin-2	1	IMTISIGEGYAPNK	IMTISIGEGYAPNK	2	IMTISIGEGYAPNK2	7049.21	8427.72	11495.4
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	IMTSEGLYR	IMTSEGLYR	2	IMTSEGLYR2	75150.2	86732.2	85162.2
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	IMTYLFDFPHGPK	IMTYLFDFPHGPK	3	IMTYLFDFPHGPK3	31595.8	47572.8	39730.8
Q4KM74	Q4KM74	SC22B_RAT	Sec22b	Vesicle-trafficking protein SEC22b	1	IMVANIEEVLQR	IMVANIEEVLQR	2	IMVANIEEVLQR2	120274	131709	118078
Q4KM74	Q4KM74	SC22B_RAT	Sec22b	Vesicle-trafficking protein SEC22b	1	IMVANIEEVLQR	IMVANIEEVLQR	3	IMVANIEEVLQR3	18225.2	19263.7	27566
O70417	O70417	PIP_RAT	Pip	Prolactin-inducible protein homolog	1	IMVDIVK	IMVDIVK	2	IMVDIVK2	386114	444655	381430
O70417	O70417	PIP_RAT	Pip	Prolactin-inducible protein homolog	1	IMVDIVKDK	IMVDIVKDK	2	IMVDIVKDK2	15560.5	12114.2	7451.82
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	IMVDMLDEDGSGK	IMVDMLDEDGSGK	2	IMVDMLDEDGSGK2	1.98436e+06	2.1469e+06	2.22469e+06
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	IMVLDSGR	IMVLDSGR	2	IMVLDSGR2	133073	141568	136969
Q99MS0	Q99MS0	S14L2_RAT	Sec14l2	SEC14-like protein 2	1	IMVLGANWK	IMVLGANWK	2	IMVLGANWK2	8222.91	6283.61	10021.4
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	IMVLMNR	IMVLMNR	2	IMVLMNR2	68392.3	47644.2	60574.2
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	IMYHASK	IMYHASK	2	IMYHASK2	21641.7	25915.5	34991.9
P82471	P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	1	IMYSHLVDYFPEYDGPQR	IMYSHLVDYFPEYDGPQR	3	IMYSHLVDYFPEYDGPQR3	142749	171614	178669
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	IMYTILEHTFHVR	IMYTILEHTFHVR	3	IMYTILEHTFHVR3	17308	18382.9	18518.4
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	IMYTILEHTFHVR	IMYTILEHTFHVR	4	IMYTILEHTFHVR4	27498.3	18170.2	21177.5
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	INAAEIESR	INAAEIESR	2	INAAEIESR2	313537	286017	297783
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	INAEFLR	INAEFLR	2	INAEFLR2	50137.4	51220.2	23179.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	INAEIQALELPQK	INAEIQALELPQK	2	INAEIQALELPQK2	654418	831710	742518
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	INAEIQALELPQK	INAEIQALELPQK	3	INAEIQALELPQK3	95696.2	99417.1	95923.5
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	INAFIEK	INAFIEK	2	INAFIEK2	74482	60842.6	48133.8
D4A746	D4A746	D4A746_RAT	Gmppb	GDP-mannose pyrophosphorylase B	1	INAGMYILSPAVLQR	INAGMYILSPAVLQR	2	INAGMYILSPAVLQR2	13929.4	10292.7	13621.4
D4A746	D4A746	D4A746_RAT	Gmppb	GDP-mannose pyrophosphorylase B	1	INAGMYILSPAVLQR	INAGMYILSPAVLQR	3	INAGMYILSPAVLQR3	11226.4		19359
D3ZL10	D3ZL10	D3ZL10_RAT	Col6a6	Collagen type VI alpha 6 chain	1	INAGTPQVLLVLTDGR	INAGTPQVLLVLTDGR	2	INAGTPQVLLVLTDGR2	4410.28	4095.06	5166.76
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	INALTAASEAACLIVSVDETIKNPR	INALTAASEAAC(UniMod:4)LIVSVDETIKNPR	3	INALTAASEAAC(UniMod:4)LIVSVDETIKNPR3		9236.14	17236
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	INALTAASEAACLIVSVDETIKNPR	INALTAASEAAC(UniMod:4)LIVSVDETIKNPR	4	INALTAASEAAC(UniMod:4)LIVSVDETIKNPR4	7134.31	3088.59	
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	INATSHVIQHPMFGAGHK	INATSHVIQHPMFGAGHK	4	INATSHVIQHPMFGAGHK4	9089.49	5012.32	
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	INAVVETGR	INAVVETGR	2	INAVVETGR2	484353	477751	495456
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	INAVVETGRR	INAVVETGRR	2	INAVVETGRR2	5380.25	3741.71	6260.7
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	INAWDLHYYMTQTEELK	INAWDLHYYMTQTEELK	3	INAWDLHYYMTQTEELK3		5471.1	7995.89
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	INAWTAQSNSAK	INAWTAQSNSAK	2	INAWTAQSNSAK2	84621.6	82545.8	93314.5
Q5XIB4	Q5XIB4	UFSP2_RAT	Ufsp2	Ufm1-specific protease 2	1	INAYHFPDELYK	INAYHFPDELYK	3	INAYHFPDELYK3	15049.9	6025.69	11357.2
Q6AY17	Q6AY17	AB17B_RAT	Abhd17b	Alpha/beta hydrolase domain-containing protein 17B	1	INCNIFSYDYSGYGASSGKPTEK	INC(UniMod:4)NIFSYDYSGYGASSGKPTEK	3	INC(UniMod:4)NIFSYDYSGYGASSGKPTEK3	13487.3	6667.9	11663.2
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	INCQGKTYLFK	INC(UniMod:4)QGKTYLFK	3	INC(UniMod:4)QGKTYLFK3	42389	49646	28388.5
A0A8I5Y8H6	A0A8I5Y8H6	A0A8I5Y8H6_RAT	Psd3	Pleckstrin and Sec7 domain containing 3	1	INCVAAVFSAPPFPAAIGSQK	INC(UniMod:4)VAAVFSAPPFPAAIGSQK	3	INC(UniMod:4)VAAVFSAPPFPAAIGSQK3	1968.05	1718.11	4354.96
Q68FT1	Q68FT1	COQ9_RAT	Coq9	Ubiquinone biosynthesis protein COQ9, mitochondrial	1	INDAMNMGHTAK	INDAMNMGHTAK	3	INDAMNMGHTAK3	25351.5	21921	12466.2
Q6AY56	Q6AY56	TBA8_RAT	Tuba8	Tubulin alpha-8 chain	1	INDDDSFTTFFSETGNGK	INDDDSFTTFFSETGNGK	3	INDDDSFTTFFSETGNGK3	9703.44	5724.93	4406.72
P82471	P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	1	INDEIER	INDEIER	2	INDEIER2	173972	168521	180210
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	INDFFLR	INDFFLR	2	INDFFLR2	89420.1	82862.8	73163.2
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	INDGQWHK	INDGQWHK	2	INDGQWHK2	4298.28	3015.5	4689.13
D3ZS41	D3ZS41	D3ZS41_RAT	Ecm2	Extracellular matrix protein 2	1	INDNNLQAIDEK	INDNNLQAIDEK	2	INDNNLQAIDEK2	14249.3	4321.22	17867.1
Q5PQM0	Q5PQM0	TM168_RAT	Tmem168	Transmembrane protein 168	1	INDQYVAVQGAELAK	INDQYVAVQGAELAK	2	INDQYVAVQGAELAK2	10121.4	14495.2	14501.8
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	INDRFEFPEQLPLDEFLQK	INDRFEFPEQLPLDEFLQK	3	INDRFEFPEQLPLDEFLQK3	64058	56713.3	57657.8
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	INDTFESK	INDTFESK	2	INDTFESK2	63949.5	80340	63903.9
F7EMB2	F7EMB2	F7EMB2_RAT	Rtraf	RNA transcription, translation and transport factor protein	1	INEAIVAVQAIIADPK	INEAIVAVQAIIADPK	2	INEAIVAVQAIIADPK2	13232.4	10338.3	9752.62
F7EMB2	F7EMB2	F7EMB2_RAT	Rtraf	RNA transcription, translation and transport factor protein	1	INEAIVAVQAIIADPK	INEAIVAVQAIIADPK	3	INEAIVAVQAIIADPK3	1653.45	2079.33	3643.95
F1LQZ3	D3ZYC9;F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	0	INEDPKDALLR	INEDPKDALLR	3	INEDPKDALLR3	15506.5	25081.2	28237.1
B5DF89	B5DF89;D4A1S2	CUL3_RAT	Cul3	Cullin-3	0	INEEIER	INEEIER	2	INEEIER2	47565.3		
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	INEFLCQCPK	INEFLC(UniMod:4)QC(UniMod:4)PK	2	INEFLC(UniMod:4)QC(UniMod:4)PK2	46970.1	48008.4	47168.8
A0A0G2K350	A0A0G2K350	A0A0G2K350_RAT	Napg	NSF attachment protein gamma	1	INEGLEHLAK	INEGLEHLAK	2	INEGLEHLAK2	7118.41	8681.21	3792.98
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	INEGNTLR	INEGNTLR	2	INEGNTLR2	583247	814961	605433
P98166	P98166	VLDLR_RAT	Vldlr	Very low-density lipoprotein receptor	1	INEISCGAR	INEISC(UniMod:4)GAR	2	INEISC(UniMod:4)GAR2	36889.8	27112.1	37298.5
P69736	P69736	EDF1_RAT	Edf1	Endothelial differentiation-related factor 1	1	INEKPQVIADYESGR	INEKPQVIADYESGR	3	INEKPQVIADYESGR3	4969.62	3783.05	4840.26
Q9Z1L0	Q9Z1L0	PK3CB_RAT	Pik3cb	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform	1	INELAIQK	INELAIQK	2	INELAIQK2	11333.6	12130.3	
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	INELLDSLPSDTR	INELLDSLPSDTR	2	INELLDSLPSDTR2	1.18689e+07	9.27477e+06	9.12647e+06
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	INELLDSLPSDTR	INELLDSLPSDTR	3	INELLDSLPSDTR3	1.76361e+06	1.40356e+06	1.43945e+06
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	INELLDSLPSDTRLVLLNAVYLSAK	INELLDSLPSDTRLVLLNAVYLSAK	3	INELLDSLPSDTRLVLLNAVYLSAK3	23045.7	21515.4	14852.3
P0C5H9	P0C5H9	MANF_RAT	Manf	Mesencephalic astrocyte-derived neurotrophic factor	1	INELMPK	INELMPK	2	INELMPK2	35825.2	35468.8	26233.9
Q2LC84	Q2LC84	NUMB_RAT	Numb	Protein numb homolog	1	INELPSTMQR	INELPSTMQR	2	INELPSTMQR2	86858.3	81477.4	80431.2
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	INELTGIK	INELTGIK	2	INELTGIK2	77411.6	80484.2	55864.4
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	INELTGIKESDTGLAPPALWDLAADK	INELTGIKESDTGLAPPALWDLAADK	3	INELTGIKESDTGLAPPALWDLAADK3		12567.2	18264.9
P81799	P81799	NAGK_RAT	Nagk	N-acetyl-D-glucosamine kinase	1	INEMVDR	INEMVDR	2	INEMVDR2	9151.64	6439.88	3690.92
Q8R490	Q8R490	Q8R490_RAT	Cdh13	Cadherin 13	1	INENTGSVSVTR	INENTGSVSVTR	2	INENTGSVSVTR2	5975.61	4317.42	6383.1
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	INESDPEYLR	INESDPEYLR	2	INESDPEYLR2	124923	131375	104570
P07872	P07872	ACOX1_RAT	Acox1	Peroxisomal acyl-coenzyme A oxidase 1	1	INESIGQGDLSELPELHALTAGLK	INESIGQGDLSELPELHALTAGLK	3	INESIGQGDLSELPELHALTAGLK3		12699.3	9707.16
Q498U1	Q498U1;A0A8I5ZW97	Q498U1_RAT	Abcg3l4	ATP-binding cassette, subfamily G (WHITE), member 3-like 4	0	INEVLELLHLDEK	INEVLELLHLDEK	3	INEVLELLHLDEK3		4169.39	
A0A8I6ACK9	A0A8I6ACK9	A0A8I6ACK9_RAT	Abcg3l3	ATP-binding cassette, subfamily G (WHITE), member 3-like 3	1	INEVLELLHLEK	INEVLELLHLEK	2	INEVLELLHLEK2	6164.29	7900.32	
A0A8I6ACK9	A0A8I6ACK9	A0A8I6ACK9_RAT	Abcg3l3	ATP-binding cassette, subfamily G (WHITE), member 3-like 3	1	INEVLELLHLEK	INEVLELLHLEK	3	INEVLELLHLEK3	6813.56	2304.68	13308
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	INEWLTK	INEWLTK	1	INEWLTK1	19952.1	12435.5	17259.9
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	INEWLTK	INEWLTK	2	INEWLTK2	955464	911285	957769
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	INEWLTLVEK	INEWLTLVEK	2	INEWLTLVEK2	190832	237627	181064
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	INFAVFPSLQGGPHNHAIAAVAVALK	INFAVFPSLQGGPHNHAIAAVAVALK	3	INFAVFPSLQGGPHNHAIAAVAVALK3	10701.6	7541.11	4991.09
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	INFAVFPSLQGGPHNHAIAAVAVALK	INFAVFPSLQGGPHNHAIAAVAVALK	4	INFAVFPSLQGGPHNHAIAAVAVALK4	18254.1	18913.6	25240.2
P55062	P55062	BI1_RAT	Tmbim6	Bax inhibitor 1	1	INFDALLK	INFDALLK	2	INFDALLK2	27011.7	27045.2	20650
A0A8I6AIH6	A0A8I6AIH6	A0A8I6AIH6_RAT	Suclg2	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial	1	INFDDNAEFR	INFDDNAEFR	2	INFDDNAEFR2	108371	99499.7	106826
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	INFDSNSAYR	INFDSNSAYR	2	INFDSNSAYR2	69314.4	65285.8	53416.8
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	INFDVNGYIVGANIETYLLEK	INFDVNGYIVGANIETYLLEK	3	INFDVNGYIVGANIETYLLEK3	64071.7	79065.7	81287.2
M0R719	M0R719	M0R719_RAT	Micos13	MICOS complex subunit MIC13	1	INFPNFR	INFPNFR	2	INFPNFR2	228858	212279	224650
G3V7E6	G3V7E6	G3V7E6_RAT	Pcm1	Pericentriolar material 1	1	INFSDLDQR	INFSDLDQR	2	INFSDLDQR2	7042.95		7425.22
D3ZCD0	D3ZCD0	D3ZCD0_RAT	Tek	receptor protein-tyrosine kinase	1	INGAYFCEGR	INGAYFC(UniMod:4)EGR	2	INGAYFC(UniMod:4)EGR2	3757.97	2721.53	6880.27
B4F7A3	B4F7A3	B4F7A3_RAT	Lgalsl	Galectin-like	1	INGDLQITK	INGDLQITK	2	INGDLQITK2	57538	62207.4	63959.2
Q4FZV0	Q4FZV0	MANBA_RAT	Manba	Beta-mannosidase	1	INGLPIFLK	INGLPIFLK	2	INGLPIFLK2	21503.7	25819.9	23188.9
Q05695	Q05695	L1CAM_RAT	L1cam	Neural cell adhesion molecule L1	1	INGMSIEK	INGMSIEK	2	INGMSIEK2	7704.88	9021.68	
A0A8I6A5H5	A0A8I6A5H5	A0A8I6A5H5_RAT	Rela	RELA proto-oncogene, NF-kB subunit	1	INGYTGPGTVR	INGYTGPGTVR	2	INGYTGPGTVR2	11186.1	12108.4	9374.29
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	INHADFATVQLR	INHADFATVQLR	3	INHADFATVQLR3	11140.5	11173.5	7802.26
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	INHALLNK	INHALLNK	2	INHALLNK2	7781.89	7288.49	3337.27
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	INHIVLK	INHIVLK	2	INHIVLK2	2138.09	5487.43	
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	INHSSDQGISSYTK	INHSSDQGISSYTK	3	INHSSDQGISSYTK3	3402.25	5320.68	6100.01
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	INHWDGAIR	INHWDGAIR	2	INHWDGAIR2	10358.8	15116.5	16437.7
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	INIALICQTLVSPPEGDQEISR	INIALIC(UniMod:4)QTLVSPPEGDQEISR	3	INIALIC(UniMod:4)QTLVSPPEGDQEISR3	5373.7		
Q6P756	Q6P756	NECP2_RAT	Necap2	Adaptin ear-binding coat-associated protein 2	1	INIANMR	INIANMR	2	INIANMR2	26327.6	27895.3	31412.3
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	INIEGTPETDLESSCSTYTLK	INIEGTPETDLESSC(UniMod:4)STYTLK	3	INIEGTPETDLESSC(UniMod:4)STYTLK3	284757	310876	345382
D3ZS02	D3ZS02	D3ZS02_RAT	Cbll1	RING-type E3 ubiquitin transferase	1	INILGEK	INILGEK	1	INILGEK1	8113.91	7801.61	3503.19
D3ZS02	D3ZS02	D3ZS02_RAT	Cbll1	RING-type E3 ubiquitin transferase	1	INILGEK	INILGEK	2	INILGEK2	801086	713328	711306
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	INILLQTYISR	INILLQTYISR	2	INILLQTYISR2	4912.09	9956.22	7725.53
A0A8I6AH91	A0A8I5ZWT0;Q6AYU2;A0A8I6AH91	A0A8I6AH91_RAT	Pcbp1	Poly(rC) binding protein 1	0	INISEGNCPER	INISEGNC(UniMod:4)PER	2	INISEGNC(UniMod:4)PER2	255254	198882	232800
O08719	O08719	EVL_RAT	Evl	Ena/VASP-like protein	1	INIYHNTASNTFR	INIYHNTASNTFR	3	INIYHNTASNTFR3	1667.17	8767.56	7493.48
P02770	P02770	ALBU_RAT	Alb	Albumin	1	INKECCHGDLLECADDR	INKEC(UniMod:4)C(UniMod:4)HGDLLEC(UniMod:4)ADDR	4	INKEC(UniMod:4)C(UniMod:4)HGDLLEC(UniMod:4)ADDR4	15441.9	12839.7	15310.4
P02770	P02770	ALBU_RAT	Alb	Albumin	1	INKECCHGDLLECADDRAELAK	INKEC(UniMod:4)C(UniMod:4)HGDLLEC(UniMod:4)ADDRAELAK	3	INKEC(UniMod:4)C(UniMod:4)HGDLLEC(UniMod:4)ADDRAELAK3	7994.55		6574.42
P02770	P02770	ALBU_RAT	Alb	Albumin	1	INKECCHGDLLECADDRAELAK	INKEC(UniMod:4)C(UniMod:4)HGDLLEC(UniMod:4)ADDRAELAK	4	INKEC(UniMod:4)C(UniMod:4)HGDLLEC(UniMod:4)ADDRAELAK4	70239.8	65351.2	67779.7
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	INKPGNMIVAFSNLAER	INKPGNMIVAFSNLAER	2	INKPGNMIVAFSNLAER2	5652.13		2777.75
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	INKPGNMIVAFSNLAER	INKPGNMIVAFSNLAER	3	INKPGNMIVAFSNLAER3	63209.1	68482.6	71222.8
Q5XIA1	Q5XIA1	NCLN_RAT	Ncln	BOS complex subunit NCLN	1	INLADDVLAWEHER	INLADDVLAWEHER	2	INLADDVLAWEHER2	7591.85	3862.98	2420.91
Q5XIA1	Q5XIA1	NCLN_RAT	Ncln	BOS complex subunit NCLN	1	INLADDVLAWEHER	INLADDVLAWEHER	3	INLADDVLAWEHER3	41506.5	45125.3	46223.7
D4A3T4	D4A3T4	D4A3T4_RAT	Zfyve1	Zinc finger FYVE-type containing 1	1	INLCLECQK	INLC(UniMod:4)LEC(UniMod:4)QK	2	INLC(UniMod:4)LEC(UniMod:4)QK2	5462.51	3973.15	4546.63
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	INLIAPPR	INLIAPPR	2	INLIAPPR2	434622	477866	450537
D3ZP72	D3ZP72	D3ZP72_RAT	Mob3c	MOB kinase activator 3C	1	INLIYGTMAEHCSETSCPVMAGGPR	INLIYGTMAEHC(UniMod:4)SETSC(UniMod:4)PVMAGGPR	3	INLIYGTMAEHC(UniMod:4)SETSC(UniMod:4)PVMAGGPR3	6317.93	5846.49	
Q62651	Q62651	ECH1_RAT	Ech1	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial	1	INLIYSR	INLIYSR	2	INLIYSR2	48016.1	34039.6	37527.5
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	INLKPSYLIIPQTGFHHEK	INLKPSYLIIPQTGFHHEK	3	INLKPSYLIIPQTGFHHEK3	2891.94	3454.59	4778.75
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	INLKPSYLIIPQTGFHHEK	INLKPSYLIIPQTGFHHEK	4	INLKPSYLIIPQTGFHHEK4	24520.5	30297.5	17866.4
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	INLSLSTLGNVISALVDGK	INLSLSTLGNVISALVDGK	2	INLSLSTLGNVISALVDGK2		4727.46	
M0R8V0	A0A8I6A3T8;M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	0	INLSTLK	INLSTLK	2	INLSTLK2	112085	96137.1	112199
A0A0G2K9Y3;A0A8I6A1N2	A0A8I6A1N2;A0A0G2K9Y3	A0A0G2K9Y3_RAT;A0A8I6A1N2_RAT	Kif9;Stard9	StAR-related lipid transfer domain containing 9	0	INLVDLAGSER	INLVDLAGSER	2	INLVDLAGSER2	37984.5	52353.5	48435.1
P36876	P56932;P36876	2ABA_RAT	Ppp2r2a	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	0	INLWHLEITDR	INLWHLEITDR	3	INLWHLEITDR3	7361.15	8137.58	3445.2
E9PSP1	E9PSP1	E9PSP1_RAT	Pltp	Phospholipid transfer protein	1	INMAFGGTFR	INMAFGGTFR	2	INMAFGGTFR2	592244	499825	531700
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	INMAHLCIVGCHAVNGVAK	INMAHLC(UniMod:4)IVGC(UniMod:4)HAVNGVAK	4	INMAHLC(UniMod:4)IVGC(UniMod:4)HAVNGVAK4	7623.85	8580.57	
P13221	P13221	AATC_RAT	Got1	Aspartate aminotransferase, cytoplasmic	1	INMCGLTTK	INMC(UniMod:4)GLTTK	2	INMC(UniMod:4)GLTTK2	33175.5	26912.7	33771
A0A8I6AA08	A0A8I6AA08	A0A8I6AA08_RAT	Septin6	Septin	1	INMEDLR	INMEDLR	2	INMEDLR2	30934.6	32834.6	26839.3
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	INMFNPTLEAQYIR	INMFNPTLEAQYIR	2	INMFNPTLEAQYIR2	21404.6	30755.6	24906.2
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	INMFNPTLEAQYIR	INMFNPTLEAQYIR	3	INMFNPTLEAQYIR3	9080.27	9062.45	16115.1
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	INMLNQQIQEELSR	INMLNQQIQEELSR	2	INMLNQQIQEELSR2	12022.1	10827.1	7026.29
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	INMLVIELK	INMLVIELK	2	INMLVIELK2	57379.6	79758.9	54034.3
D3ZIT4	D3ZIT4	D3ZIT4_RAT	Anapc7	Anaphase promoting complex subunit 7	1	INMMLANLYK	INMMLANLYK	2	INMMLANLYK2		9753.51	7851.83
Q5M7W7	Q5M7W7	SYPM_RAT	Pars2	Probable proline--tRNA ligase, mitochondrial	1	INMPSLSPAELWR	INMPSLSPAELWR	2	INMPSLSPAELWR2		5680.27	
P09330	P09330	PRPS2_RAT	Prps2	Ribose-phosphate pyrophosphokinase 2	1	INNAAFEAVVVTNTIPQEDK	INNAAFEAVVVTNTIPQEDK	3	INNAAFEAVVVTNTIPQEDK3	10985.8	6733.75	5900.91
P60892	A0A0G2JSV3;P60892	PRPS1_RAT	Prps1	Ribose-phosphate pyrophosphokinase 1	0	INNACFEAVVVTNTIPQEDK	INNAC(UniMod:4)FEAVVVTNTIPQEDK	3	INNAC(UniMod:4)FEAVVVTNTIPQEDK3	12062.6	13907	8935.59
A0A8I6ANB2	A0A8I6ANB2	A0A8I6ANB2_RAT	Ppfibp1	PPFIA binding protein 1	1	INNFEPNCLR	INNFEPNC(UniMod:4)LR	2	INNFEPNC(UniMod:4)LR2	3169.52	7479.53	12363.8
Q63598	Q63598	PLST_RAT	Pls3	Plastin-3	1	INNFSADIK	INNFSADIK	2	INNFSADIK2	12945.7	6975.95	9871.44
F1M0B5	F1M0B5	F1M0B5_RAT	Cd84	CD84 molecule	1	INNIAWTSK	INNIAWTSK	2	INNIAWTSK2	227057	224187	241712
Q9R0E0	Q9R0E0	CEGT_RAT	Ugcg	Ceramide glucosyltransferase	1	INNLMPAYEVAK	INNLMPAYEVAK	2	INNLMPAYEVAK2	7079.48	4370.67	2396.32
B0BN65	B0BN65	B0BN65_RAT	Cyria	CYFIP related Rac1 interactor A	1	INNMHLDIENEVNNEMANR	INNMHLDIENEVNNEMANR	3	INNMHLDIENEVNNEMANR3	24242.9	17481.3	20826.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	INNQFTLDSQTK	INNQFTLDSQTK	2	INNQFTLDSQTK2	264813	413800	366511
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	INNVELLDK	INNVELLDK	2	INNVELLDK2	6165.51	6013.43	7647.9
A0A0G2JXI6	A0A0G2JXI6	A0A0G2JXI6_RAT	Cyrib	CYFIP related Rac1 interactor B	1	INNVPAEGENEVNNELANR	INNVPAEGENEVNNELANR	3	INNVPAEGENEVNNELANR3	16256.7	18257.7	11232.2
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	INNVTSPEFTSVQHGSR	INNVTSPEFTSVQHGSR	3	INNVTSPEFTSVQHGSR3	3133.65		4398.54
A0A8I6A6W7	A0A8I6A6W7	A0A8I6A6W7_RAT	ENSRNOG00000070729	Ig-like domain-containing protein	1	INPANGNTVYAEK	INPANGNTVYAEK	2	INPANGNTVYAEK2	25946.3	27033.5	33230.8
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	INPCGHVDNPR	INPC(UniMod:4)GHVDNPR	2	INPC(UniMod:4)GHVDNPR2		3310.78	
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	INPCGHVDNPR	INPC(UniMod:4)GHVDNPR	3	INPC(UniMod:4)GHVDNPR3	148818	116191	144329
P48508	P48508	GSH0_RAT	Gclm	Glutamate--cysteine ligase regulatory subunit	1	INPDEREEMK	INPDEREEMK	3	INPDEREEMK3	52409.5	41074.3	21646.4
A0JN30	A0JN30	A0JN30_RAT	Cnpy2	Canopy FGF signaling regulator 2	1	INPDGSQSVVEVPYAR	INPDGSQSVVEVPYAR	2	INPDGSQSVVEVPYAR2	106761	102929	76974
A0JN30	A0JN30	A0JN30_RAT	Cnpy2	Canopy FGF signaling regulator 2	1	INPDGSQSVVEVPYAR	INPDGSQSVVEVPYAR	3	INPDGSQSVVEVPYAR3	15267.9	17336.2	10511
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	INPDHIGFYR	INPDHIGFYR	3	INPDHIGFYR3	112750	91801.9	114995
M0R7E7	M0R7E7;Q925D6	M0R7E7_RAT	Map2k3	Mitogen activated protein kinase kinase 3	0	INPELNQK	INPELNQK	2	INPELNQK2	72158.6	72697.5	70532.1
D3ZJF9	D3ZJF9	D3ZJF9_RAT	Gla	Alpha-galactosidase	1	INPSGTVLLR	INPSGTVLLR	2	INPSGTVLLR2	81981	78362.3	70508.3
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	INPSSMFDVHVK	INPSSMFDVHVK	2	INPSSMFDVHVK2	25516	16926.9	26715.1
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	INPSSMFDVHVK	INPSSMFDVHVK	3	INPSSMFDVHVK3	106241	122720	97982.6
P24049	A0A8I5ZRW8;P24049	RL17_RAT	Rpl17	Large ribosomal subunit protein uL22	0	INPYMSSPCHIEMILTEK	INPYMSSPC(UniMod:4)HIEMILTEK	3	INPYMSSPC(UniMod:4)HIEMILTEK3	26502.5	25144	24458.2
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	INQANSPDLLSVSQYYSGELVSYVR	INQANSPDLLSVSQYYSGELVSYVR	3	INQANSPDLLSVSQYYSGELVSYVR3	7384.96	6870.01	3633.72
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	INQDGTFLVR	INQDGTFLVR	2	INQDGTFLVR2	399595	393007	456431
Q66H12	Q66H12	NAGAB_RAT	Naga	Alpha-N-acetylgalactosaminidase	1	INQDPLGIQGR	INQDPLGIQGR	2	INQDPLGIQGR2	31036.9	30480.2	25691.9
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	INQETNPGDMVEK	INQETNPGDMVEK	2	INQETNPGDMVEK2	31298.8	30950	27596.2
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	INQISLDESGEHMGVCSEDGK	INQISLDESGEHMGVC(UniMod:4)SEDGK	3	INQISLDESGEHMGVC(UniMod:4)SEDGK3	10951.1	17716.3	14442.2
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	INQLSAR	INQLSAR	2	INQLSAR2	40766.9	52290.1	37111.8
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	INQNVAALPVASSVMDR	INQNVAALPVASSVMDR	2	INQNVAALPVASSVMDR2	15472.8	14892.8	12886.1
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	INQQEEPGFEVITR	INQQEEPGFEVITR	2	INQQEEPGFEVITR2	48562.4	49750.9	43101
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	INQQEEPGFEVITR	INQQEEPGFEVITR	3	INQQEEPGFEVITR3	12136.4	13826.9	12712.6
Q9JJM9	Q9JJM9	SEPT5_RAT	Septin5	Septin-5	1	INQTVEILK	INQTVEILK	2	INQTVEILK2	25503.2	25086.1	54046.3
P55260	P55260	ANXA4_RAT	Anxa4	Annexin A4	1	INQTYQQQYGR	INQTYQQQYGR	2	INQTYQQQYGR2	2627.61	4864.42	1203.54
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	INSCFSANTVEQILENLR	INSC(UniMod:4)FSANTVEQILENLR	3	INSC(UniMod:4)FSANTVEQILENLR3	4091.59	4809.77	3209.9
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	INSENAEALSQLLTLAR	INSENAEALSQLLTLAR	2	INSENAEALSQLLTLAR2	21018.2	25723.1	37016.2
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	INSENAEALSQLLTLAR	INSENAEALSQLLTLAR	3	INSENAEALSQLLTLAR3	14669.5	25076.3	12104.1
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	INSIMEPR	INSIMEPR	2	INSIMEPR2	29796.4	31652.8	33662.9
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	INSITVDNCK	INSITVDNC(UniMod:4)K	2	INSITVDNC(UniMod:4)K2	741905	677901	638641
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	INSITVDNCKK	INSITVDNC(UniMod:4)KK	2	INSITVDNC(UniMod:4)KK2	60620.6	46286.8	61712.2
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	INSITVDNCKK	INSITVDNC(UniMod:4)KK	3	INSITVDNC(UniMod:4)KK3	282384	339075	397161
B1WBW4	B1WBW4	ARM10_RAT	Armc10	Armadillo repeat-containing protein 10	1	INSLNQSIK	INSLNQSIK	2	INSLNQSIK2	89694.6	83519.4	98811.9
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	INSNPNPLVQMSVGHK	INSNPNPLVQMSVGHK	3	INSNPNPLVQMSVGHK3	39417.5	30361.5	28447.4
A0A8I5Y1D5	A0A8I5Y1D5	A0A8I5Y1D5_RAT	Mtmr1	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	INSNYEFCDTYPAVIVVPTSVK	INSNYEFC(UniMod:4)DTYPAVIVVPTSVK	3	INSNYEFC(UniMod:4)DTYPAVIVVPTSVK3	5294.81	2911.94	5108.05
Q63515	Q63515	C4BPB_RAT	C4bpb	C4b-binding protein beta chain	1	INSSGPVNISGK	INSSGPVNISGK	2	INSSGPVNISGK2	88349.2	93793.5	114675
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	INSSVTDIEEIIGVR	INSSVTDIEEIIGVR	2	INSSVTDIEEIIGVR2		2204.5	6832.94
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	INSTATPDQDR	INSTATPDQDR	2	INSTATPDQDR2	10315.6	8128.56	9851.05
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	INSTATPDQDREK	INSTATPDQDREK	2	INSTATPDQDREK2	3012.61		9866.21
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	INSTATPDQDREK	INSTATPDQDREK	3	INSTATPDQDREK3			80302.5
Q3B7D5	Q3B7D5	RASF2_RAT	Rassf2	Ras association domain-containing protein 2	1	INSTMTTPQVLK	INSTMTTPQVLK	2	INSTMTTPQVLK2	6437.32	1670.3	8180.64
Q5QJC9	Q5QJC9	BAG5_RAT	Bag5	BAG family molecular chaperone regulator 5	1	INSVMCEVNK	INSVMC(UniMod:4)EVNK	2	INSVMC(UniMod:4)EVNK2	10104.7	8598.85	8961.38
A0A0G2K5E4	A0A0G2K5E4	A0A0G2K5E4_RAT	Dnaja3	DnaJ heat shock protein family (Hsp40) member A3	1	INSYGYGDHYIHIK	INSYGYGDHYIHIK	3	INSYGYGDHYIHIK3	8261.21		
A0A0G2K5E4	A0A0G2K5E4	A0A0G2K5E4_RAT	Dnaja3	DnaJ heat shock protein family (Hsp40) member A3	1	INSYGYGDHYIHIK	INSYGYGDHYIHIK	4	INSYGYGDHYIHIK4	16921.1	6894.37	10855.5
D4A770	D4A770	CL004_RAT		Protein C12orf4 homolog	1	INSYSGIK	INSYSGIK	2	INSYSGIK2		4189.61	6346.57
B4F767	B4F767	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	1	INSYVEVAVDGLPSETK	INSYVEVAVDGLPSETK	2	INSYVEVAVDGLPSETK2	1354.58		1606.21
Q9Z1K9	Q9Z1K9	ADA17_RAT	Adam17	Disintegrin and metalloproteinase domain-containing protein 17	1	INTDGAEYNIEPLWR	INTDGAEYNIEPLWR	2	INTDGAEYNIEPLWR2	4999.54	3420.8	4090.95
P61943	P61943	SIA10_RAT	St3gal6	Type 2 lactosamine alpha-2,3-sialyltransferase	1	INTDGFWK	INTDGFWK	2	INTDGFWK2	6415.77	5696.02	4236.75
G3V8G1	G3V8G1	G3V8G1_RAT	Agtpbp1	tubulin-glutamate carboxypeptidase	1	INTDSTESDTAR	INTDSTESDTAR	2	INTDSTESDTAR2	1151.14	2647.32	913.36
P13941	P13941	CO3A1_RAT	Col3a1	Collagen alpha-1(III) chain	1	INTEEIMSSLK	INTEEIMSSLK	2	INTEEIMSSLK2	23369.9	14420.8	27659.4
P51111	P51111	HD_RAT	Htt	Huntingtin	1	INTLGWTSR	INTLGWTSR	2	INTLGWTSR2	17023.9	24974.4	25100.2
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	INTLQAIWMMDPK	INTLQAIWMMDPK	2	INTLQAIWMMDPK2	5825.45	6043.82	6284.47
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	INTTGKPSNLPTFSR	INTTGKPSNLPTFSR	2	INTTGKPSNLPTFSR2	223246	218338	240077
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	INTTGKPSNLPTFSR	INTTGKPSNLPTFSR	3	INTTGKPSNLPTFSR3	4.61328e+06	5.11455e+06	5.03079e+06
A0A8I6A6H8	A0A8I6A6H8	A0A8I6A6H8_RAT	Serpinb6a	Serpin family B member 6A	1	INTWVAK	INTWVAK	1	INTWVAK1	7047.17	5487.64	2551.1
A0A8I6A6H8	A0A8I6A6H8	A0A8I6A6H8_RAT	Serpinb6a	Serpin family B member 6A	1	INTWVAK	INTWVAK	2	INTWVAK2	362809	358767	392292
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	INVADIINGVQEK	INVADIINGVQEK	2	INVADIINGVQEK2	23906.5	29047.3	32100.9
A0A8I6AE33	A0A8I6AE33	A0A8I6AE33_RAT	Wdr37	WD repeat domain 37	1	INVCVGQK	INVC(UniMod:4)VGQK	2	INVC(UniMod:4)VGQK2	48962.9	62783.9	39676.1
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	INVGCIFCGPK	INVGC(UniMod:4)IFC(UniMod:4)GPK	2	INVGC(UniMod:4)IFC(UniMod:4)GPK2	30856.8	20148.2	34869.3
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	INVLAAQYQSLLNSYGEPVDDK	INVLAAQYQSLLNSYGEPVDDK	3	INVLAAQYQSLLNSYGEPVDDK3	9230.13	10229.1	6774.78
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	INVLHKPPYEHPK	INVLHKPPYEHPK	4	INVLHKPPYEHPK4	17664.8	8907.62	10408.4
Q62636	Q62636;P62836	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	0	INVNEIFYDLVR	INVNEIFYDLVR	2	INVNEIFYDLVR2	2.25184e+06	2.08563e+06	2.27003e+06
Q62636	Q62636;P62836	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	0	INVNEIFYDLVR	INVNEIFYDLVR	3	INVNEIFYDLVR3	306786	418567	322269
Q5PQL7	Q5PQL7	ITM2C_RAT	Itm2c	Integral membrane protein 2C	1	INVPVPQFGGGDPADIIHDFQR	INVPVPQFGGGDPADIIHDFQR	3	INVPVPQFGGGDPADIIHDFQR3	16726.7	24398.5	16115.9
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	INVSEYTYR	INVSEYTYR	2	INVSEYTYR2	113360	114280	90000.6
Q63768	Q63768	CRK_RAT	Crk	Adapter molecule crk	1	INVSGQWEGECNGK	INVSGQWEGEC(UniMod:4)NGK	2	INVSGQWEGEC(UniMod:4)NGK2	6491.99	4690.75	4193.65
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	INVSPTTYR	INVSPTTYR	2	INVSPTTYR2	385199	407343	349334
A0A8I6A371	A0A8I6A371	A0A8I6A371_RAT	Nmi	N-myc (and STAT) interactor	1	INVTGIPDELSEEQTR	INVTGIPDELSEEQTR	2	INVTGIPDELSEEQTR2	51539.3	34635.8	52755.3
A0A8I6A371	A0A8I6A371	A0A8I6A371_RAT	Nmi	N-myc (and STAT) interactor	1	INVTGIPDELSEEQTRDK	INVTGIPDELSEEQTRDK	3	INVTGIPDELSEEQTRDK3	24820	9081.42	11793
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	INVTSTACVHEFSR	INVTSTAC(UniMod:4)VHEFSR	3	INVTSTAC(UniMod:4)VHEFSR3	2021.88	7107.28	
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	INVYNDLNDPVVRPLGSENLLLR	INVYNDLNDPVVRPLGSENLLLR	3	INVYNDLNDPVVRPLGSENLLLR3	89729.7	79950.7	92456.4
P85108	P85108	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	1	INVYYNEAAGNK	INVYYNEAAGNK	2	INVYYNEAAGNK2	212478	187228	184922
P85108	P85108	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	1	INVYYNEAAGNK	INVYYNEAAGNK	3	INVYYNEAAGNK3	81183.2	85805	85702.9
P85108	P85108	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	1	INVYYNEAAGNKYVPR	INVYYNEAAGNKYVPR	3	INVYYNEAAGNKYVPR3	13888.5	16138.3	21844.8
Q6P9T8	Q6P9T8	TBB4B_RAT	Tubb4b	Tubulin beta-4B chain	1	INVYYNEATGGK	INVYYNEATGGK	2	INVYYNEATGGK2	250453	4.38563e+06	4.53844e+06
B4F7C2	B4F7C2	B4F7C2_RAT	Tubb4a	Tubulin beta chain	1	INVYYNEATGGNYVPR	INVYYNEATGGNYVPR	2	INVYYNEATGGNYVPR2	10604.7	12836.9	8846.82
B4F7C2	B4F7C2	B4F7C2_RAT	Tubb4a	Tubulin beta chain	1	INVYYNEATGGNYVPR	INVYYNEATGGNYVPR	3	INVYYNEATGGNYVPR3	6039.22	2630.08	
Q3KRE8	Q3KRE8	TBB2B_RAT	Tubb2b	Tubulin beta-2B chain	1	INVYYNEATGNK	INVYYNEATGNK	2	INVYYNEATGNK2	11778.6	7048.08	9907.07
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	INWDQPAEAIHNWIR	INWDQPAEAIHNWIR	3	INWDQPAEAIHNWIR3	8634.45	12818.4	12671.3
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	INWEEEAAFR	INWEEEAAFR	2	INWEEEAAFR2	684547	870325	793372
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	INYECHVGYVNK	INYEC(UniMod:4)HVGYVNK	2	INYEC(UniMod:4)HVGYVNK2	30404.7	17825.4	20534.9
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	INYECHVGYVNK	INYEC(UniMod:4)HVGYVNK	3	INYEC(UniMod:4)HVGYVNK3	1.04322e+06	789628	825011
Q99MS0	Q99MS0	S14L2_RAT	Sec14l2	SEC14-like protein 2	1	INYGGDIPK	INYGGDIPK	2	INYGGDIPK2	17089.8	12397.1	14377.7
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	INYMYAQYVK	INYMYAQYVK	2	INYMYAQYVK2	319291	298790	273817
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	IPADTLAK	IPADTLAK	2	IPADTLAK2	154260	124074	144618
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	IPAETLNR	IPAETLNR	2	IPAETLNR2	850759	868644	801342
Q5XIC1	Q5XIC1	GMPPA_RAT	Gmppa	Mannose-1-phosphate guanyltransferase alpha	1	IPAEVLILNSIVLPHK	IPAEVLILNSIVLPHK	3	IPAEVLILNSIVLPHK3	12062.4	12204.2	10771.5
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	IPAFGSIPIEFR	IPAFGSIPIEFR	2	IPAFGSIPIEFR2	83569.3	78709.1	88509.3
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	IPAFGSIPIEFR	IPAFGSIPIEFR	3	IPAFGSIPIEFR3	8427.73		4662.57
A0JPJ7	A0JPJ7	OLA1_RAT	Ola1	Obg-like ATPase 1	1	IPAFLNVVDIAGLVK	IPAFLNVVDIAGLVK	3	IPAFLNVVDIAGLVK3	2806.96		
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	IPAMTIAK	IPAMTIAK	2	IPAMTIAK2	1.85211e+06	1.58351e+06	1.71542e+06
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	IPANWTNPSGK	IPANWTNPSGK	2	IPANWTNPSGK2	119980	106887	135759
D3ZKN1	D3ZKN1	D3ZKN1_RAT	Bpifa6	BPI fold containing family A, member 6	1	IPAPIPVASPVK	IPAPIPVASPVK	2	IPAPIPVASPVK2	4674.58	5293.54	10186.7
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	IPAPWAAGK	IPAPWAAGK	2	IPAPWAAGK2	36236	16101.2	22670.1
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	IPAQGGTNINK	IPAQGGTNINK	2	IPAQGGTNINK2	3.66952e+06	3.64717e+06	3.54041e+06
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	IPAQSEPVR	IPAQSEPVR	2	IPAQSEPVR2	1.40026e+06	1.27267e+06	1.36519e+06
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	IPASMTAEELTLEILDR	IPASMTAEELTLEILDR	3	IPASMTAEELTLEILDR3	8277.32	6841.53	6891.25
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	IPASMTAEELTLEILDRR	IPASMTAEELTLEILDRR	3	IPASMTAEELTLEILDRR3	77910.6	74572.2	74717.2
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	IPATCEPIQSVYFFSGDK	IPATC(UniMod:4)EPIQSVYFFSGDK	3	IPATC(UniMod:4)EPIQSVYFFSGDK3	62482.6	108054	104277
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	IPATCEPIQSVYFFSGDKYYR	IPATC(UniMod:4)EPIQSVYFFSGDKYYR	3	IPATC(UniMod:4)EPIQSVYFFSGDKYYR3	1.69502e+06	2.10379e+06	1.90782e+06
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	IPATCEPIQSVYFFSGDKYYR	IPATC(UniMod:4)EPIQSVYFFSGDKYYR	4	IPATC(UniMod:4)EPIQSVYFFSGDKYYR4	70454.6	108184	101771
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	IPAVIYR	IPAVIYR	2	IPAVIYR2		11620.3	9876.6
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	IPAVVVEK	IPAVVVEK	2	IPAVVVEK2	281903	275357	326057
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	IPAYFITVHDPAVPPGEDPDGR	IPAYFITVHDPAVPPGEDPDGR	3	IPAYFITVHDPAVPPGEDPDGR3	90966.3	114558	87788.7
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	IPCNDSK	IPC(UniMod:4)NDSK	2	IPC(UniMod:4)NDSK2			87857.1
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	IPCSQPPK	IPC(UniMod:4)SQPPK	2	IPC(UniMod:4)SQPPK2	679045	493460	659273
D4A0G9	D4A0G9	D4A0G9_RAT	Ercc6l	ERCC excision repair 6 like, spindle assembly checkpoint helicase	1	IPDDVNTSLHPR	IPDDVNTSLHPR	3	IPDDVNTSLHPR3	10293.7	12256.7	
F1LNT3	F1LNT3	F1LNT3_RAT	R3hdm1	R3H domain containing 1	1	IPDEDTIGTQQR	IPDEDTIGTQQR	2	IPDEDTIGTQQR2	4489.17		
O35964	O35179;O35964	SH3G1_RAT	Sh3gl1	Endophilin-A2	0	IPDEELR	IPDEELR	2	IPDEELR2	336642	352895	375373
D4A2C6	D4A2C6	D4A2C6_RAT	Lsm4	U6 snRNA-associated Sm-like protein LSm4	1	IPDEIIDMVR	IPDEIIDMVR	2	IPDEIIDMVR2	56037.1	66645.5	55363.4
D4A2C6	D4A2C6	D4A2C6_RAT	Lsm4	U6 snRNA-associated Sm-like protein LSm4	1	IPDEIIDMVREEAAK	IPDEIIDMVREEAAK	3	IPDEIIDMVREEAAK3	9581.04	10321.5	6593.08
Q6NX65	Q6NX65	PDC10_RAT	Pdcd10	Programmed cell death protein 10	1	IPDEINDR	IPDEINDR	2	IPDEINDR2	760033	669364	660378
F1LYX9	F1LYX9	F1LYX9_RAT	Dsg2	Desmoglein 2	1	IPDFESR	IPDFESR	2	IPDFESR2	234206	155188	123030
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	IPDIVVWPTCHDDVVK	IPDIVVWPTC(UniMod:4)HDDVVK	2	IPDIVVWPTC(UniMod:4)HDDVVK2	1375.06	939.451	1648.58
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	IPDIVVWPTCHDDVVK	IPDIVVWPTC(UniMod:4)HDDVVK	3	IPDIVVWPTC(UniMod:4)HDDVVK3	21347.8	28821.3	29894.6
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	IPDIYDCIK	IPDIYDC(UniMod:4)IK	2	IPDIYDC(UniMod:4)IK2	34622.4	37596.9	26223.5
Q63584	Q63584	TMEDA_RAT	Tmed10	Transmembrane emp24 domain-containing protein 10	1	IPDQLVILDMK	IPDQLVILDMK	2	IPDQLVILDMK2	621748	606778	660637
Q63584	Q63584	TMEDA_RAT	Tmed10	Transmembrane emp24 domain-containing protein 10	1	IPDQLVILDMK	IPDQLVILDMK	3	IPDQLVILDMK3	4213.07	5261.11	2871.08
A0A8I5ZP57	A0A8I5ZP57	A0A8I5ZP57_RAT	Pkdcc	Protein kinase domain containing, cytoplasmic	1	IPDSTITQEDYR	IPDSTITQEDYR	2	IPDSTITQEDYR2	92503.4	78692.4	70128
P62271	D3ZM33;A0A8I6AK40;P62271;D3ZAU6	RS18_RAT	Rps18	Small ribosomal subunit protein uS13	0	IPDWFLNR	IPDWFLNR	2	IPDWFLNR2	119191	121070	124659
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	IPEALAGPPSDFGLFLSDDDPK	IPEALAGPPSDFGLFLSDDDPK	3	IPEALAGPPSDFGLFLSDDDPK3	76105.7	84766.4	111196
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	IPEALAGPPSDFGLFLSDDDPKK	IPEALAGPPSDFGLFLSDDDPKK	3	IPEALAGPPSDFGLFLSDDDPKK3	322201	328275	340446
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	IPEALAGPPSDFGLFLSDDDPKK	IPEALAGPPSDFGLFLSDDDPKK	4	IPEALAGPPSDFGLFLSDDDPKK4	19756.5	15405.7	16097.9
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	IPEAQER	IPEAQER	2	IPEAQER2		36218.4	
M0R7E7	M0R7E7	M0R7E7_RAT	Map2k3	Mitogen activated protein kinase kinase 3	1	IPEDILGEIAVSIVR	IPEDILGEIAVSIVR	2	IPEDILGEIAVSIVR2	4791.08	825.457	
M0R7E7	M0R7E7	M0R7E7_RAT	Map2k3	Mitogen activated protein kinase kinase 3	1	IPEDILGEIAVSIVR	IPEDILGEIAVSIVR	3	IPEDILGEIAVSIVR3	3181.82		6016.54
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	IPEDQHTLLVK	IPEDQHTLLVK	3	IPEDQHTLLVK3	72344.9	56496.7	62976.4
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	IPEEEEQEDPYLNDR	IPEEEEQEDPYLNDR	2	IPEEEEQEDPYLNDR2	101761	90854	58386.9
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	IPEEEEQEDPYLNDR	IPEEEEQEDPYLNDR	3	IPEEEEQEDPYLNDR3	104753	57901.2	50874.3
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	IPEEFNVFNLIQEMR	IPEEFNVFNLIQEMR	2	IPEEFNVFNLIQEMR2		9166.77	11477.5
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	IPEEHDLESQIR	IPEEHDLESQIR	3	IPEEHDLESQIR3	17007.5	20500.4	31402.9
Q6QI44	Q6QI44	NAA25_RAT	Naa25	N-alpha-acetyltransferase 25, NatB auxiliary subunit	1	IPEFIAFR	IPEFIAFR	2	IPEFIAFR2	11297.6	8158.48	14328.7
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	IPEGPIDQGTATGR	IPEGPIDQGTATGR	2	IPEGPIDQGTATGR2	44554.8	28947.3	49695.1
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	IPEHDLDPNVTIILK	IPEHDLDPNVTIILK	3	IPEHDLDPNVTIILK3	44059.8	44367.4	34619.3
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	IPEINSSDMSAHVTSPSGHVTEAEIVPVGK	IPEINSSDMSAHVTSPSGHVTEAEIVPVGK	4	IPEINSSDMSAHVTSPSGHVTEAEIVPVGK4	6365.93	5851.72	7156.24
Q8CGS4	Q8CGS4	CHMP3_RAT	Chmp3	Charged multivesicular body protein 3	1	IPEIQATMR	IPEIQATMR	2	IPEIQATMR2	119401	125084	127134
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	IPEISIQDMTAQVTSPSGK	IPEISIQDMTAQVTSPSGK	3	IPEISIQDMTAQVTSPSGK3	399777	423158	545828
P61023	A0A8I6AT96;P61023;A0A8I6AI64	CHP1_RAT	Chp1	Calcineurin B homologous protein 1	0	IPELAINPLGDR	IPELAINPLGDR	2	IPELAINPLGDR2	3013.52	5042.26	1374.93
A0A8I6AUQ7	A0A8I6AUQ7	A0A8I6AUQ7_RAT	Zpr1	ZPR1 zinc finger	1	IPELDFEIPAFSQK	IPELDFEIPAFSQK	2	IPELDFEIPAFSQK2	14431.9	10896.8	11835.2
Q6AYF8	Q6AYF8	Q6AYF8_RAT	Serpinb9	Serpin family B member 9	1	IPELLSGGSVDSETR	IPELLSGGSVDSETR	2	IPELLSGGSVDSETR2	18019	10667.3	16009.2
D4A392	D4A392	D4A392_RAT	Serpinb9d	Serine (or cysteine) peptidase inhibitor, clade B, member 9d	1	IPELLSSDSVGSETK	IPELLSSDSVGSETK	2	IPELLSSDSVGSETK2	9682.29	9053.19	10779
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	IPELYKPIFR	IPELYKPIFR	3	IPELYKPIFR3	18256.1	25228.8	
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	IPENEIPTPAKPVTDLTSAPAPK	IPENEIPTPAKPVTDLTSAPAPK	3	IPENEIPTPAKPVTDLTSAPAPK3	14472.6	11612.8	10327.6
Q01986	Q01986	MP2K1_RAT	Map2k1	Dual specificity mitogen-activated protein kinase kinase 1	1	IPEQILGK	IPEQILGK	2	IPEQILGK2	271057	246052	322215
P00507	P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	1	IPEQSVLLLHACAHNPTGVDPRPEQWK	IPEQSVLLLHAC(UniMod:4)AHNPTGVDPRPEQWK	4	IPEQSVLLLHAC(UniMod:4)AHNPTGVDPRPEQWK4	157804	137382	141071
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	IPEQTYITLK	IPEQTYITLK	2	IPEQTYITLK2	113561	89816.3	87360.6
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	IPESGGDNGVFDIFELIGGAR	IPESGGDNGVFDIFELIGGAR	3	IPESGGDNGVFDIFELIGGAR3	207920		9823.97
A0A8I6A356	A0A8I6A356	A0A8I6A356_RAT	Ube2k	E2 ubiquitin-conjugating enzyme	1	IPETYPFNPPK	IPETYPFNPPK	2	IPETYPFNPPK2		15028.3	13868.2
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	IPEVDLAR	IPEVDLAR	2	IPEVDLAR2	287418	261034	208604
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	IPEVLATLPESTSTAR	IPEVLATLPESTSTAR	2	IPEVLATLPESTSTAR2	120824	95573.1	79539.2
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	IPEVLATLPESTSTAR	IPEVLATLPESTSTAR	3	IPEVLATLPESTSTAR3	51282.1	33306.9	25856.3
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	IPEVLATLPESTSTARPTCGK	IPEVLATLPESTSTARPTC(UniMod:4)GK	3	IPEVLATLPESTSTARPTC(UniMod:4)GK3	759278	660781	682059
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	IPEVLATLPESTSTARPTCGK	IPEVLATLPESTSTARPTC(UniMod:4)GK	4	IPEVLATLPESTSTARPTC(UniMod:4)GK4	7547.15	10771.5	6767.67
Q64165	Q64165	Q64165_RAT	Gcnt1	Glucosaminyl (N-acetyl) transferase 1	1	IPEVPGSLPSSHK	IPEVPGSLPSSHK	3	IPEVPGSLPSSHK3	21349.6	9223	
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	IPEYQHLLNDIHQCYLDQR	IPEYQHLLNDIHQC(UniMod:4)YLDQR	4	IPEYQHLLNDIHQC(UniMod:4)YLDQR4		4160.14	
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	IPFASIASK	IPFASIASK	2	IPFASIASK2	47140.2	38987.3	33535.1
A0A8I5ZQ55	A0A8I5ZQ55;F1M4Q3	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	0	IPFDPSLK	IPFDPSLK	2	IPFDPSLK2	41609.5	51435.8	41969.6
M0RD40	M0RD40	M0RD40_RAT	Sik3	non-specific serine/threonine protein kinase	1	IPFFMSTECEHLIR	IPFFMSTEC(UniMod:4)EHLIR	3	IPFFMSTEC(UniMod:4)EHLIR3		3458.34	6600.96
Q4KLH3	Q4KLH3	OGRL1_RAT	Ogfrl1	Opioid growth factor receptor-like protein 1	1	IPFKPDGVYIEEVLNK	IPFKPDGVYIEEVLNK	3	IPFKPDGVYIEEVLNK3	5978.35	2361.98	7697.98
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	IPFLLSGTSYK	IPFLLSGTSYK	2	IPFLLSGTSYK2	375194	352003	397813
Q02589	Q02589	ADPRH_RAT	Adprh	ADP-ribosylhydrolase ARH1	1	IPFNSHEGGCGAAMR	IPFNSHEGGC(UniMod:4)GAAMR	3	IPFNSHEGGC(UniMod:4)GAAMR3	22220.7	15996.3	17930.4
A0A8I6AA52	A0A8I6AA52	A0A8I6AA52_RAT	Wdr48	WD repeat-containing protein 48	1	IPFYLQPHASSGAK	IPFYLQPHASSGAK	3	IPFYLQPHASSGAK3		11106.8	
O08679	Q8VHF0;O08679	MARK2_RAT	Mark2	Serine/threonine-protein kinase MARK2	0	IPFYMSTDCENLLK	IPFYMSTDC(UniMod:4)ENLLK	2	IPFYMSTDC(UniMod:4)ENLLK2		1714.46	2314.43
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	IPGDMLR	IPGDMLR	2	IPGDMLR2	315196	241448	281834
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	IPGDQIVSVVFIK	IPGDQIVSVVFIK	2	IPGDQIVSVVFIK2	2514.92		1138.28
P32198	P32198	CPT1A_RAT	Cpt1a	Carnitine O-palmitoyltransferase 1, liver isoform	1	IPGEETDTIQHIK	IPGEETDTIQHIK	2	IPGEETDTIQHIK2	5527.01		
P32198	P32198	CPT1A_RAT	Cpt1a	Carnitine O-palmitoyltransferase 1, liver isoform	1	IPGEETDTIQHIK	IPGEETDTIQHIK	3	IPGEETDTIQHIK3	25343.8	24678.4	36760.3
A0A8I6ADL4	A0A8I6ADL4	A0A8I6ADL4_RAT	Serinc3	Serine incorporator 3	1	IPGFCEGEFQIK	IPGFC(UniMod:4)EGEFQIK	2	IPGFC(UniMod:4)EGEFQIK2	5244.69	4129.86	
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	IPGGIIEDSCVLR	IPGGIIEDSC(UniMod:4)VLR	2	IPGGIIEDSC(UniMod:4)VLR2	229692	221756	231563
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	IPGGIIEDSCVLR	IPGGIIEDSC(UniMod:4)VLR	3	IPGGIIEDSC(UniMod:4)VLR3	5455.92	2733.08	3151.66
Q4V8E4	Q4V8E4	CFA36_RAT	Cfap36	Cilia- and flagella-associated protein 36	1	IPGLEHASMEGPIANLSALGTEELR	IPGLEHASMEGPIANLSALGTEELR	3	IPGLEHASMEGPIANLSALGTEELR3	8703.21	10545.8	17664.3
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	IPGMLIIDTPGHESFSNLR	IPGMLIIDTPGHESFSNLR	3	IPGMLIIDTPGHESFSNLR3	63407.3	68239.5	75752.4
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	IPGSQLFVSSQASERPNR	IPGSQLFVSSQASERPNR	3	IPGSQLFVSSQASERPNR3	13344.4	5348.49	6372.01
G3V8W9	G3V8W9	G3V8W9_RAT	Tstd3	Thiosulfate sulfurtransferase like domain containing 3	1	IPGSVNIPLDEVGEALQMNPR	IPGSVNIPLDEVGEALQMNPR	3	IPGSVNIPLDEVGEALQMNPR3	5730.37	9057.11	5361.23
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	IPGSVSAMR	IPGSVSAMR	2	IPGSVSAMR2	64858.7	64829.6	56885
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	IPGTDRFPGLNENLR	IPGTDRFPGLNENLR	3	IPGTDRFPGLNENLR3	51210.9	52516	39248.9
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	IPGTSNNGLEEEFKK	IPGTSNNGLEEEFKK	3	IPGTSNNGLEEEFKK3	19287.6	17602.1	
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	IPHAIFSLSNLQELDLK	IPHAIFSLSNLQELDLK	3	IPHAIFSLSNLQELDLK3	10487.3	6157.74	2512.58
Q498T9	Q498T9	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	1	IPHAVFSLLSLQELDLKENNLK	IPHAVFSLLSLQELDLKENNLK	4	IPHAVFSLLSLQELDLKENNLK4	3194.49	7238.14	8471.39
B2GV15	B2GV15	B2GV15_RAT	Dbt	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	IPHFGYCDEVDLTELVK	IPHFGYC(UniMod:4)DEVDLTELVK	3	IPHFGYC(UniMod:4)DEVDLTELVK3	9018.48	14220.4	10999.8
P46101	P46101	DPP6_RAT	Dpp6	Dipeptidyl aminopeptidase-like protein 6	1	IPHGDPQSLDPPEVSNAK	IPHGDPQSLDPPEVSNAK	3	IPHGDPQSLDPPEVSNAK3	4911.42	5748.73	
A0A8I6A8L3	A0A8I6A8L3	A0A8I6A8L3_RAT	Dnpep	Aspartyl aminopeptidase	1	IPHLAIHLQR	IPHLAIHLQR	3	IPHLAIHLQR3	11141.6	11847	11923.9
Q5XI64	Q5XI64	ABHD6_RAT	Abhd6	Monoacylglycerol lipase ABHD6	1	IPHNSFYR	IPHNSFYR	2	IPHNSFYR2	8020.54	8291.99	
Q6IRK9	Q6IRK9	CBPQ_RAT	Cpq	Carboxypeptidase Q	1	IPHWERGEESAVMVVPR	IPHWERGEESAVMVVPR	4	IPHWERGEESAVMVVPR4	6906.95	7831.3	9526.61
F1LRI5	F1LRI5	F1LRI5_RAT	Gcn1	GCN1 activator of EIF2AK4	1	IPIAVSGIR	IPIAVSGIR	2	IPIAVSGIR2	6430.24	2113.5	
P62815	P62815;D3ZZS8	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	0	IPIFSAAGLPHNEIAAQICR	IPIFSAAGLPHNEIAAQIC(UniMod:4)R	3	IPIFSAAGLPHNEIAAQIC(UniMod:4)R3	54734.5	35535.1	49971.1
D3Z9L0	D3Z9L0	D3Z9L0_RAT	Agk	Acylglycerol kinase, mitochondrial	1	IPIGFIPLGQTSSLSHTLFAESGNK	IPIGFIPLGQTSSLSHTLFAESGNK	3	IPIGFIPLGQTSSLSHTLFAESGNK3	8655.63	11722.2	
A0A0G2K9K4	A0A0G2K9K4	A0A0G2K9K4_RAT	Tfg	Trafficking from ER to golgi regulator	1	IPIHNEDITYDELVLMMQR	IPIHNEDITYDELVLMMQR	3	IPIHNEDITYDELVLMMQR3	57541.9	19989.7	47460.9
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	IPILGMK	IPILGMK	2	IPILGMK2	12194.9	10770.9	10204.7
Q03346	Q03346	MPPB_RAT	Pmpcb	Mitochondrial-processing peptidase subunit beta	1	IPIPELEAR	IPIPELEAR	2	IPIPELEAR2	18996	4648.39	12374.3
P08650	P08650	CO5_RAT	C5	Complement C5	1	IPITYDNGFLFIHTDKPVYTPDQSVK	IPITYDNGFLFIHTDKPVYTPDQSVK	4	IPITYDNGFLFIHTDKPVYTPDQSVK4	25952.7	20493.1	19462.2
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	IPKPHPPLSR	IPKPHPPLSR	3	IPKPHPPLSR3	105042	73434.4	102859
Q68FY0	Q68FY0	QCR1_RAT	Uqcrc1	Cytochrome b-c1 complex subunit 1, mitochondrial	1	IPLAEWESR	IPLAEWESR	2	IPLAEWESR2	126775	102454	114110
P08650	P08650	CO5_RAT	C5	Complement C5	1	IPLDLVPK	IPLDLVPK	2	IPLDLVPK2	2.5884e+06	2.03111e+06	1.8792e+06
Q99P39	Q99P39	NFS1_RAT	Nfs1	Cysteine desulfurase	1	IPLDVNDMK	IPLDVNDMK	2	IPLDVNDMK2	35868.3		58066.7
G3V6K6	G3V6K6	G3V6K6_RAT	Egfr	Receptor protein-tyrosine kinase	1	IPLENLQIIR	IPLENLQIIR	2	IPLENLQIIR2	8775.66	16852.2	24102.9
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	IPLGFYYGHTYILPWESELK	IPLGFYYGHTYILPWESELK	3	IPLGFYYGHTYILPWESELK3	13988.5	14105	12514.7
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	IPLHVLR	IPLHVLR	2	IPLHVLR2	41108	28190.7	38913.4
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	IPLIFQK	IPLIFQK	2	IPLIFQK2	28509	26867.3	25006.3
Q5XI64	Q5XI64	ABHD6_RAT	Abhd6	Monoacylglycerol lipase ABHD6	1	IPLIPSTPEEMSEMLQLCSYVR	IPLIPSTPEEMSEMLQLC(UniMod:4)SYVR	3	IPLIPSTPEEMSEMLQLC(UniMod:4)SYVR3		5477.46	5574.7
Q99PW3	Q99PW3	NEUR1_RAT	Neu1	Sialidase-1	1	IPLITATPR	IPLITATPR	2	IPLITATPR2	23265.3	19464.4	26769.2
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	IPLKDVVPR	IPLKDVVPR	2	IPLKDVVPR2	10761.3		2521.32
Q9Z0V5	Q9Z0V5	PRDX4_RAT	Prdx4	Peroxiredoxin-4	1	IPLLSDLNHQISK	IPLLSDLNHQISK	2	IPLLSDLNHQISK2	14223.6	17796.2	9148.7
Q9Z0V5	Q9Z0V5	PRDX4_RAT	Prdx4	Peroxiredoxin-4	1	IPLLSDLNHQISK	IPLLSDLNHQISK	3	IPLLSDLNHQISK3	135698	118048	113281
P36860	P36860	RALB_RAT	Ralb	Ras-related protein Ral-B	1	IPLLVVGNK	IPLLVVGNK	2	IPLLVVGNK2	7978.9		2605.94
F1LU48	F1LU48	F1LU48_RAT	Ergic1	Endoplasmic reticulum-Golgi intermediate compartment protein	1	IPLNNGVGCR	IPLNNGVGC(UniMod:4)R	2	IPLNNGVGC(UniMod:4)R2		21046.5	11461.3
Q62784	Q62784	INP4A_RAT	Inpp4a	Inositol polyphosphate-4-phosphatase type I A	1	IPLPGPLFDSLPR	IPLPGPLFDSLPR	2	IPLPGPLFDSLPR2	13268.9	17170	17144.7
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	IPLPMTVEEYR	IPLPMTVEEYR	2	IPLPMTVEEYR2	48106.7	49628.7	46741.1
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	IPLSNHYK	IPLSNHYK	2	IPLSNHYK2	9823.24	4013.44	8365.53
Q5I0C3	Q5I0C3	MCCA_RAT	Mccc1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	1	IPLSQEEIPLQGHAFEAR	IPLSQEEIPLQGHAFEAR	3	IPLSQEEIPLQGHAFEAR3	21909.6	23040	18155.3
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	IPLSQLLASDNMTINQR	IPLSQLLASDNMTINQR	2	IPLSQLLASDNMTINQR2	5275.26	5550.22	3032.95
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	IPLSQLLASDNMTINQR	IPLSQLLASDNMTINQR	3	IPLSQLLASDNMTINQR3	17816.5	11434.1	
A0A0G2JZZ4	A0A0G2JZZ4	A0A0G2JZZ4_RAT	Selenom	Selenoprotein M	1	IPLSQMTR	IPLSQMTR	2	IPLSQMTR2	20674.2	16063.5	18784.9
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	IPLSVCFPEYK	IPLSVC(UniMod:4)FPEYK	2	IPLSVC(UniMod:4)FPEYK2	243367	172272	242629
D4A9D8	D4A9D8;A0A8I5ZR95	D4A9D8_RAT	Osbp	Oxysterol-binding protein	0	IPMPVNFNEPLSMLQR	IPMPVNFNEPLSMLQR	2	IPMPVNFNEPLSMLQR2	41548.7	62463.5	75888.8
D4A9D8	D4A9D8;A0A8I5ZR95	D4A9D8_RAT	Osbp	Oxysterol-binding protein	0	IPMPVNFNEPLSMLQR	IPMPVNFNEPLSMLQR	3	IPMPVNFNEPLSMLQR3	45779	28849.9	40448.5
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	IPNEGHISHFQGK	IPNEGHISHFQGK	3	IPNEGHISHFQGK3	21890.6	21134.5	30701.6
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	IPNHVFEIDEDCEKDEDSSSLCSQK	IPNHVFEIDEDC(UniMod:4)EKDEDSSSLC(UniMod:4)SQK	4	IPNHVFEIDEDC(UniMod:4)EKDEDSSSLC(UniMod:4)SQK4	3956.8	8105.89	3683.14
P07151	P07151	B2MG_RAT	B2m	Beta-2-microglobulin	1	IPNIEMSDLSFSK	IPNIEMSDLSFSK	2	IPNIEMSDLSFSK2	122638	85994.9	90115.6
Q6P6R2	Q6P6R2	DLDH_RAT	Dld	Dihydrolipoyl dehydrogenase, mitochondrial	1	IPNIFAIGDVVAGPMLAHK	IPNIFAIGDVVAGPMLAHK	3	IPNIFAIGDVVAGPMLAHK3	126681	131936	139947
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	IPNLLPDDAVDNK	IPNLLPDDAVDNK	2	IPNLLPDDAVDNK2	232723	190803	205089
P35565	P35565	CALX_RAT	Canx	Calnexin	1	IPNPDFFEDLEPFR	IPNPDFFEDLEPFR	2	IPNPDFFEDLEPFR2	66172.9	55933.1	69021.5
P35565	P35565	CALX_RAT	Canx	Calnexin	1	IPNPDFFEDLEPFR	IPNPDFFEDLEPFR	3	IPNPDFFEDLEPFR3		5706.6	6682.64
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	IPNVENETMIPVLTSK	IPNVENETMIPVLTSK	2	IPNVENETMIPVLTSK2	33978.8	26949	32361
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	IPNVENETMIPVLTSK	IPNVENETMIPVLTSK	3	IPNVENETMIPVLTSK3	23350.6	33955.1	25619.7
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	IPPCGWR	IPPC(UniMod:4)GWR	2	IPPC(UniMod:4)GWR2	251882	254720	238475
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	IPPDGSMGSITCIAWK	IPPDGSMGSITC(UniMod:4)IAWK	2	IPPDGSMGSITC(UniMod:4)IAWK2	17728.5	26185.4	29011.5
Q3KR92	Q3KR92	TPST1_RAT	Tpst1	Protein-tyrosine sulfotransferase 1	1	IPPDVLQDMAVIAPMLAK	IPPDVLQDMAVIAPMLAK	3	IPPDVLQDMAVIAPMLAK3	6295.94	5800.5	3031.79
Q9JM80	Q9JM80	PHAG1_RAT	Pag1	Phosphoprotein associated with glycosphingolipid-enriched microdomains 1	1	IPPENAVDAMLTAR	IPPENAVDAMLTAR	2	IPPENAVDAMLTAR2	38665.1	43442.2	33987.4
Q4QQV2	Q4QQV2	DOK1_RAT	Dok1	Docking protein 1	1	IPPGPSQDSLYSDPLGSTPAGAGEGVQR	IPPGPSQDSLYSDPLGSTPAGAGEGVQR	3	IPPGPSQDSLYSDPLGSTPAGAGEGVQR3	16571.9	25017.3	23053.6
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	IPPNATLVFEVELFEFK	IPPNATLVFEVELFEFK	3	IPPNATLVFEVELFEFK3	3006		
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	IPPNSETTLVLVGR	IPPNSETTLVLVGR	2	IPPNSETTLVLVGR2	73432.3	80780.8	53036.8
A0A0G2K762	A0A0G2K762	A0A0G2K762_RAT	Abcf2	ATP binding cassette subfamily F member 2	1	IPPPVIMVQNVSFK	IPPPVIMVQNVSFK	2	IPPPVIMVQNVSFK2	6336.96	7275.77	
A0A0G2K762	A0A0G2K762	A0A0G2K762_RAT	Abcf2	ATP binding cassette subfamily F member 2	1	IPPPVIMVQNVSFK	IPPPVIMVQNVSFK	3	IPPPVIMVQNVSFK3	2775.38	2342.08	1848.05
P50609	P50609	FMOD_RAT	Fmod	Fibromodulin	1	IPPVNTNLENLYLQGNR	IPPVNTNLENLYLQGNR	2	IPPVNTNLENLYLQGNR2	22889	20883.1	10964
P50609	P50609	FMOD_RAT	Fmod	Fibromodulin	1	IPPVNTNLENLYLQGNR	IPPVNTNLENLYLQGNR	3	IPPVNTNLENLYLQGNR3	17546.1	15532.2	15635.7
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	IPPYHYIHVLDQNSNVSR	IPPYHYIHVLDQNSNVSR	4	IPPYHYIHVLDQNSNVSR4	125547	138071	144275
B5DF93	B5DF93	PATL1_RAT	Patl1	Protein PAT1 homolog 1	1	IPQAALAK	IPQAALAK	2	IPQAALAK2	16974.7	11670.9	15110.7
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	IPQDGDYEFLK	IPQDGDYEFLK	2	IPQDGDYEFLK2	157827	152681	158873
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	IPQDRPTSEELLK	IPQDRPTSEELLK	3	IPQDRPTSEELLK3	58561.6	67278.1	48797.6
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	IPQERPAAAELLR	IPQERPAAAELLR	3	IPQERPAAAELLR3	198926	248215	226697
A1L1J9	A1L1J9	LMF2_RAT	Lmf2	Lipase maturation factor 2	1	IPQGGLAGALPHEDLPFWLVR	IPQGGLAGALPHEDLPFWLVR	3	IPQGGLAGALPHEDLPFWLVR3	1758.3	7917.4	4900.77
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	IPQLDELNQTGQILQEQMGK	IPQLDELNQTGQILQEQMGK	3	IPQLDELNQTGQILQEQMGK3	72040.7	60533.1	60909.2
P62815	P62815	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	1	IPQSTLSEFYPR	IPQSTLSEFYPR	2	IPQSTLSEFYPR2	7161.98	8789.94	
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	IPQSTTELR	IPQSTTELR	2	IPQSTTELR2	33387.2	24516.6	33464.6
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	IPQVPLCVSYK	IPQVPLC(UniMod:4)VSYK	2	IPQVPLC(UniMod:4)VSYK2	17573.6	14636.3	22084.5
D4A758	D4A758	D4A758_RAT	Lrrc8b	Leucine rich repeat containing 8 VRAC subunit B	1	IPQVVTDLLPSLQK	IPQVVTDLLPSLQK	2	IPQVVTDLLPSLQK2	888.773	2829.11	
D4A758	D4A758	D4A758_RAT	Lrrc8b	Leucine rich repeat containing 8 VRAC subunit B	1	IPQVVTDLLPSLQK	IPQVVTDLLPSLQK	3	IPQVVTDLLPSLQK3	5814.6	2268.24	6933.81
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	IPRPGPPPATR	IPRPGPPPATR	3	IPRPGPPPATR3	95226.8	75457.2	92131.2
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	IPRPSVSQGCSR	IPRPSVSQGC(UniMod:4)SR	3	IPRPSVSQGC(UniMod:4)SR3	19710.2	23814.7	17956.4
D4A0G0	D4A0G0	D4A0G0_RAT	Osbpl7	Oxysterol-binding protein	1	IPSAPVIPTHQASVTTERPK	IPSAPVIPTHQASVTTERPK	4	IPSAPVIPTHQASVTTERPK4	5011.74		5353.56
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	IPSASAALPELK	IPSASAALPELK	2	IPSASAALPELK2	182040	147101	124194
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	IPSAVGYQPTLATDMGTMQER	IPSAVGYQPTLATDMGTMQER	3	IPSAVGYQPTLATDMGTMQER3	569501	556670	646225
P26431	P26431	SL9A1_RAT	Slc9a1	Sodium/hydrogen exchanger 1	1	IPSAVSTVSMQNIHPK	IPSAVSTVSMQNIHPK	2	IPSAVSTVSMQNIHPK2	2850.11	2975.16	
P26431	P26431	SL9A1_RAT	Slc9a1	Sodium/hydrogen exchanger 1	1	IPSAVSTVSMQNIHPK	IPSAVSTVSMQNIHPK	3	IPSAVSTVSMQNIHPK3	47323	63321.8	54158.2
D4ABB8	D4ABB8	ATP9B_RAT	Atp9b	Probable phospholipid-transporting ATPase IIB	1	IPSDMVFLR	IPSDMVFLR	2	IPSDMVFLR2	33727.6	30296.4	24177.7
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	IPSDTFYDNEDTTTDK	IPSDTFYDNEDTTTDK	2	IPSDTFYDNEDTTTDK2	30578.1	21991.7	28127.8
Q9JHW5	Q9JHW5	VAMP7_RAT	Vamp7	Vesicle-associated membrane protein 7	1	IPSENNK	IPSENNK	1	IPSENNK1			2898.32
Q9JHW5	Q9JHW5	VAMP7_RAT	Vamp7	Vesicle-associated membrane protein 7	1	IPSENNK	IPSENNK	2	IPSENNK2			281335
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	IPSEQEQLR	IPSEQEQLR	2	IPSEQEQLR2	37788.7	38695.9	25130.5
G3V6R4	G3V6R4	G3V6R4_RAT	Lrrc1	Leucine rich repeat containing 1	1	IPSEVSQAMELHVLDVAGNR	IPSEVSQAMELHVLDVAGNR	3	IPSEVSQAMELHVLDVAGNR3	5592.91	2588.24	
Q66H59	Q66H59	NPL_RAT	Npl	N-acetylneuraminate lyase	1	IPSFQGLK	IPSFQGLK	2	IPSFQGLK2	199255	152407	137329
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	IPSGAFEDLENLK	IPSGAFEDLENLK	2	IPSGAFEDLENLK2	29658.8	25954.3	33158.5
A0A0G2K2Z2	A0A0G2K2Z2	A0A0G2K2Z2_RAT	Inpp5k	Inositol polyphosphate-5-phosphatase K	1	IPSGFFLR	IPSGFFLR	2	IPSGFFLR2	49053.9	50654.8	38921.6
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	IPSHAVVAR	IPSHAVVAR	2	IPSHAVVAR2	1.27654e+06	801114	981085
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	IPSIWINFK	IPSIWINFK	2	IPSIWINFK2	112494	94359.7	82486.2
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	IPSNMWVEAWETAK	IPSNMWVEAWETAK	2	IPSNMWVEAWETAK2	9993.05	3267.98	9026.98
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	IPSNMWVEAWETAKPVPAR	IPSNMWVEAWETAKPVPAR	3	IPSNMWVEAWETAKPVPAR3	34163.6	30263.4	30034.2
O35568	O35568	FBLN3_RAT	Efemp1	EGF-containing fibulin-like extracellular matrix protein 1	1	IPSNPSHR	IPSNPSHR	2	IPSNPSHR2			24663.7
P47824	P47824	P2RX1_RAT	P2rx1	P2X purinoceptor 1	1	IPSPALLR	IPSPALLR	2	IPSPALLR2	35896.1	25774.7	17459.7
Q5BK06	Q5BK06	CCDB1_RAT	Ccndbp1	Cyclin-D1-binding protein 1	1	IPSPSPQETQR	IPSPSPQETQR	2	IPSPSPQETQR2		10336.3	
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	IPSQFSEEER	IPSQFSEEER	2	IPSQFSEEER2	219843	226439	238317
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	IPSQLLNTELTER	IPSQLLNTELTER	2	IPSQLLNTELTER2	37894.3	34686.3	30549.5
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	IPSSQTESETSPGFPER	IPSSQTESETSPGFPER	2	IPSSQTESETSPGFPER2	7714.79	3105.45	3231.32
Q07803	Q07803	EFGM_RAT	Gfm1	Elongation factor G, mitochondrial	1	IPSVSDLK	IPSVSDLK	2	IPSVSDLK2	15107.1	12850	23470.4
P54777	P54777	PEX6_RAT	Pex6	Peroxisomal ATPase PEX6	1	IPSVSWHDVGGLQDVK	IPSVSWHDVGGLQDVK	3	IPSVSWHDVGGLQDVK3	6404.18	3545.94	7627.26
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	IPSVTSGTTSSSNTMVAPTDGNPDSK	IPSVTSGTTSSSNTMVAPTDGNPDSK	3	IPSVTSGTTSSSNTMVAPTDGNPDSK3	16477.9	23800.7	18314.4
Q642G4	Q642G4	PEX14_RAT	Pex14	Peroxisomal membrane protein PEX14	1	IPSWQIPVK	IPSWQIPVK	2	IPSWQIPVK2	34924.8	18211.9	39584.6
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	IPSWTGPGFVR	IPSWTGPGFVR	2	IPSWTGPGFVR2	60563	56810.1	60261.4
Q6IRK9	Q6IRK9	CBPQ_RAT	Cpq	Carboxypeptidase Q	1	IPTACITIEDAEMMSR	IPTAC(UniMod:4)ITIEDAEMMSR	2	IPTAC(UniMod:4)ITIEDAEMMSR2	14996.9	13206	17006
Q68G12	Q68G12	SIAT9_RAT	St3gal5	Lactosylceramide alpha-2,3-sialyltransferase	1	IPTASEAELK	IPTASEAELK	2	IPTASEAELK2	41837.7	21421.7	29203.8
Q3MQ06	Q3MQ06	ATG5_RAT	Atg5	Autophagy protein 5	1	IPTCFTLYQDEITER	IPTC(UniMod:4)FTLYQDEITER	2	IPTC(UniMod:4)FTLYQDEITER2	11293.8	6682.76	10583.9
Q4V8K5	Q4V8K5	BROX_RAT	Brox	BRO1 domain-containing protein BROX	1	IPTEAPQLELK	IPTEAPQLELK	2	IPTEAPQLELK2	43939.5	38355.2	38086.8
A0A8I5ZSU2	A0A8I5ZSU2	A0A8I5ZSU2_RAT	Ccm2l	CCM2 like scaffold protein	1	IPTHEIAAASYLQDDALHLLVLK	IPTHEIAAASYLQDDALHLLVLK	4	IPTHEIAAASYLQDDALHLLVLK4	1892.19		4259.2
D3ZRN5	D3ZRN5	D3ZRN5_RAT	Ro60	Ro60, Y RNA binding protein	1	IPTHLFTFIQFK	IPTHLFTFIQFK	3	IPTHLFTFIQFK3	9740.98	7366.67	6115.16
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	IPTISTQLK	IPTISTQLK	2	IPTISTQLK2	2.58908e+06	2.55419e+06	2.49728e+06
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	IPTPLNTSGVQVICMK	IPTPLNTSGVQVIC(UniMod:4)MK	2	IPTPLNTSGVQVIC(UniMod:4)MK2	22139.4	13553.7	16748.1
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	IPTPLNTSGVQVICMK	IPTPLNTSGVQVIC(UniMod:4)MK	3	IPTPLNTSGVQVIC(UniMod:4)MK3	2557.71	11127.5	12420.3
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	IPTPQAGDEAILMPFADR	IPTPQAGDEAILMPFADR	2	IPTPQAGDEAILMPFADR2	10336.5	7133.14	16403.7
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	IPTPQAGDEAILMPFADR	IPTPQAGDEAILMPFADR	3	IPTPQAGDEAILMPFADR3	23889.6	19443.5	13759.5
Q4V8I7	Q4V8I7	LRC8A_RAT	Lrrc8a	Volume-regulated anion channel subunit LRRC8A	1	IPTQLFYCR	IPTQLFYC(UniMod:4)R	2	IPTQLFYC(UniMod:4)R2	20655.8	15543.8	13842.6
O35254	O35254	GORS1_RAT	Gorasp1	Golgi reassembly-stacking protein 1	1	IPTQPSSQYK	IPTQPSSQYK	2	IPTQPSSQYK2	81747.8	73920.4	90056.8
Q9R064	Q9R064	GORS2_RAT	Gorasp2	Golgi reassembly-stacking protein 2	1	IPTRPFEEGK	IPTRPFEEGK	3	IPTRPFEEGK3	110810	96789.2	92494.3
P0CE43	P0CE43	GRB10_RAT	Grb10	Growth factor receptor-bound protein 10	1	IPTSQMEK	IPTSQMEK	2	IPTSQMEK2	84621	93702.6	87223.8
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	IPVAFPTGDANSLCK	IPVAFPTGDANSLC(UniMod:4)K	2	IPVAFPTGDANSLC(UniMod:4)K2	2301.74	5318.32	2685.9
F1M1H0	F1M1H0	F1M1H0_RAT	Dera	deoxyribose-phosphate aldolase	1	IPVASVATGFPAGQTHLK	IPVASVATGFPAGQTHLK	3	IPVASVATGFPAGQTHLK3	65813.2	54794.6	53186.6
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	IPVDTYNNILTVLK	IPVDTYNNILTVLK	2	IPVDTYNNILTVLK2	46730.7	52159.3	52197.3
P55213	P55213	CASP3_RAT	Casp3	Caspase-3	1	IPVEADFLYAYSTAPGYYSWR	IPVEADFLYAYSTAPGYYSWR	3	IPVEADFLYAYSTAPGYYSWR3	33113.5	22213.1	27246.5
A0A8I5YBU7	A0A8I5YBU7	A0A8I5YBU7_RAT	Snx14	Sorting nexin 14	1	IPVFCIDVER	IPVFC(UniMod:4)IDVER	2	IPVFC(UniMod:4)IDVER2	5013.78	4275.3	6561.36
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	IPVFSAFR	IPVFSAFR	2	IPVFSAFR2	1.75834e+06	1.8143e+06	1.72868e+06
A0A8I6AD67	A0A8I6AD67	A0A8I6AD67_RAT	Parp9	Poly [ADP-ribose] polymerase	1	IPVGGFAVTR	IPVGGFAVTR	2	IPVGGFAVTR2	9383.15	10150.7	
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	IPVGPETLGR	IPVGPETLGR	2	IPVGPETLGR2	1.82663e+06	1.45517e+06	1.61179e+06
M0R8P6	M0R8P6	M0R8P6_RAT	Wwc3	Uncharacterized protein	1	IPVHSSMLTLK	IPVHSSMLTLK	3	IPVHSSMLTLK3	11771.8	8658.78	6090.53
Q675A5	Q675A5	PAG15_RAT	Pla2g15	Phospholipase A2 group XV	1	IPVIGPLK	IPVIGPLK	2	IPVIGPLK2	15791.2	9199.45	13816.8
Q6XVN8	Q62625;A0A0G2K9Q7;Q6XVN8	MLP3A_RAT	Map1lc3a	Microtubule-associated proteins 1A/1B light chain 3A	0	IPVIIER	IPVIIER	2	IPVIIER2	46379.4	42935.7	32467.2
A0A8I5ZTB8	A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	IPVLSWIHPESQATVTR	IPVLSWIHPESQATVTR	3	IPVLSWIHPESQATVTR3	27834.9	25361.1	13672.6
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	IPVLVQSK	IPVLVQSK	2	IPVLVQSK2	23477.3	26731	26124.6
Q5U2R0	Q5U2R0	MAT2B_RAT	Mat2b	Methionine adenosyltransferase 2 subunit beta	1	IPVLYGEVEK	IPVLYGEVEK	2	IPVLYGEVEK2	35999.2	33107.1	34451.8
P31399	A0A8J8YKF4;P31399;A0A8I5ZWF8	ATP5H_RAT	Atp5pd	ATP synthase subunit d, mitochondrial	0	IPVPEDK	IPVPEDK	1	IPVPEDK1	6660.39		5087.88
P31399	A0A8J8YKF4;P31399;A0A8I5ZWF8	ATP5H_RAT	Atp5pd	ATP synthase subunit d, mitochondrial	0	IPVPEDK	IPVPEDK	2	IPVPEDK2	1.29118e+06	1.22402e+06	1.1714e+06
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	IPVPILPGLPMNNHGNYIVR	IPVPILPGLPMNNHGNYIVR	3	IPVPILPGLPMNNHGNYIVR3	15091.1	15442.1	14377.4
D3ZCJ3	D3ZCJ3	D3ZCJ3_RAT	Mfsd6	Major facilitator superfamily domain containing 6	1	IPVPSSPVPIATIDLVQQQTEDVMPHIEAR	IPVPSSPVPIATIDLVQQQTEDVMPHIEAR	4	IPVPSSPVPIATIDLVQQQTEDVMPHIEAR4	16243.8	16780.1	24188.1
Q6MG06	Q6MG06	GNL1_RAT	Gnl1	Guanine nucleotide-binding protein-like 1	1	IPVQALLHLR	IPVQALLHLR	3	IPVQALLHLR3	13915.5	13553.8	6808.65
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	IPVSFCR	IPVSFC(UniMod:4)R	2	IPVSFC(UniMod:4)R2	167972	176702	190459
P23593	P23593	APOD_RAT	Apod	Apolipoprotein D	1	IPVSFEK	IPVSFEK	2	IPVSFEK2	591225	700899	860603
Q99MB4	Q99MB4	ZNG1_RAT	Zng1	Zinc-regulated GTPase metalloprotein activator 1	1	IPVTIVTGYLGAGK	IPVTIVTGYLGAGK	2	IPVTIVTGYLGAGK2	11329.8	13866.8	3207.12
Q99MB4	Q99MB4	ZNG1_RAT	Zng1	Zinc-regulated GTPase metalloprotein activator 1	1	IPVTIVTGYLGAGK	IPVTIVTGYLGAGK	3	IPVTIVTGYLGAGK3		1097.02	1824.93
Q9QYL8	Q9QYL8	LYPA2_RAT	Lypla2	Acyl-protein thioesterase 2	1	IPVTLNMK	IPVTLNMK	2	IPVTLNMK2	36718.7	32378.3	26278.2
A0A0G2JVT8	A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	1	IPVTSVYSGPLR	IPVTSVYSGPLR	2	IPVTSVYSGPLR2	8895.22	9816	3370.69
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	IPVVEKR	IPVVEKR	2	IPVVEKR2			84204.6
A0A8I5ZPK6	A0A8I5ZPK6	A0A8I5ZPK6_RAT	Kdm5a	[histone H3]-trimethyl-L-lysine(4) demethylase	1	IPVVERK	IPVVERK	2	IPVVERK2	200413	256500	256127
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	IPVVLLACGSFNPITNMHLR	IPVVLLAC(UniMod:4)GSFNPITNMHLR	3	IPVVLLAC(UniMod:4)GSFNPITNMHLR3	25477	33312.3	16479.4
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	IPVVLLACGSFNPITNMHLR	IPVVLLAC(UniMod:4)GSFNPITNMHLR	4	IPVVLLAC(UniMod:4)GSFNPITNMHLR4	12470.1	9200.99	7347.02
Q76GL9	Q76GL9	Q76GL9_RAT	Slc1a4	Amino acid transporter	1	IPVVTDVK	IPVVTDVK	2	IPVVTDVK2	12148.1	13301.2	14757.6
Q5XIH7	Q5XIH7	PHB2_RAT	Phb2	Prohibitin-2	1	IPWFQYPIIYDIR	IPWFQYPIIYDIR	2	IPWFQYPIIYDIR2	32886.3	43172.6	36139.4
Q5XIH7	Q5XIH7	PHB2_RAT	Phb2	Prohibitin-2	1	IPWFQYPIIYDIR	IPWFQYPIIYDIR	3	IPWFQYPIIYDIR3	34784.4	36117	36293.6
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	IPWSALK	IPWSALK	2	IPWSALK2	171342	174320	127349
F1LVL2	F1LVL2	F1LVL2_RAT	Icoslg	Inducible T-cell co-stimulator ligand	1	IPWTPHVDVICCVENVALHQNITSISR	IPWTPHVDVIC(UniMod:4)C(UniMod:4)VENVALHQNITSISR	4	IPWTPHVDVIC(UniMod:4)C(UniMod:4)VENVALHQNITSISR4	8238.84	15285.4	4685.86
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	IPWVPPECIENPK	IPWVPPEC(UniMod:4)IENPK	2	IPWVPPEC(UniMod:4)IENPK2	61614.1	44468.1	64946.7
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	IPYKPNYSLNLWSIMK	IPYKPNYSLNLWSIMK	3	IPYKPNYSLNLWSIMK3	40670.5	51807.6	46394.4
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	IPYLGVYIFK	IPYLGVYIFK	2	IPYLGVYIFK2	13723.7	14912.7	7206.36
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	IPYLPITNFNQNWQDGK	IPYLPITNFNQNWQDGK	3	IPYLPITNFNQNWQDGK3		4297.48	1548.99
Q9EPX4	Q9EPX4	P2Y12_RAT	P2ry12	P2Y purinoceptor 12	1	IPYTLSQTR	IPYTLSQTR	2	IPYTLSQTR2	76883.4	81133.5	64207.3
P18266	P18266	GSK3B_RAT	Gsk3b	Glycogen synthase kinase-3 beta	1	IQAAASPPANATAASDTNAGDR	IQAAASPPANATAASDTNAGDR	3	IQAAASPPANATAASDTNAGDR3	3929.3	4822.67	
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	IQAAEYGLAVLEEK	IQAAEYGLAVLEEK	2	IQAAEYGLAVLEEK2	11783.2	12977	13974.7
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	IQAAEYGLAVLEEK	IQAAEYGLAVLEEK	3	IQAAEYGLAVLEEK3	2791.46	3393.57	4361.5
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	IQACTQQGLSSK	IQAC(UniMod:4)TQQGLSSK	2	IQAC(UniMod:4)TQQGLSSK2	13065.3	16220.2	18217.9
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	IQAEISAHELTLEELKK	IQAEISAHELTLEELKK	3	IQAEISAHELTLEELKK3	41087	28996.2	24660.1
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	IQAEISAHELTLEELKK	IQAEISAHELTLEELKK	4	IQAEISAHELTLEELKK4	88169.4	78197.2	70545.5
F7F288	F7F288	F7F288_RAT	Bcap29	B-cell receptor-associated protein	1	IQAENTNK	IQAENTNK	2	IQAENTNK2			30965.3
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	IQAEVEAQLAR	IQAEVEAQLAR	2	IQAEVEAQLAR2	4376.18		4067.57
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	IQAEVLGTQK	IQAEVLGTQK	2	IQAEVLGTQK2		63616.1	69601.7
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	IQAGEEKL	IQAGEEKL	2	IQAGEEKL2	32266.3	34815.7	29722.9
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	IQAGEGETAVLNQLQEK	IQAGEGETAVLNQLQEK	2	IQAGEGETAVLNQLQEK2	10597.4	7012.57	4697.12
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	IQAGEGETAVLNQLQEK	IQAGEGETAVLNQLQEK	3	IQAGEGETAVLNQLQEK3	9509.5	4995.42	13398.4
A0A8I6GKW1	A0A8I6GKW1	A0A8I6GKW1_RAT	Pym1	PYM homolog 1, exon junction complex associated factor	1	IQAGEISQPSR	IQAGEISQPSR	2	IQAGEISQPSR2		11194.3	8265.32
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	IQAIAWAR	IQAIAWAR	2	IQAIAWAR2	583240	585941	588859
P47853	P47853	PGS1_RAT	Bgn	Biglycan	1	IQAIELEDLLR	IQAIELEDLLR	2	IQAIELEDLLR2	193654	165602	160110
D3ZGN0	D3ZGN0	D3ZGN0_RAT	Tbc1d4	TBC1 domain family, member 4	1	IQALESNLETLLTR	IQALESNLETLLTR	2	IQALESNLETLLTR2	7990.77	7231.34	8244.89
Q499Q1	Q499Q1	Q499Q1_RAT	Rnf126	RING-type E3 ubiquitin transferase	1	IQALPTVPVTEEHVGSGLECPVCK	IQALPTVPVTEEHVGSGLEC(UniMod:4)PVC(UniMod:4)K	3	IQALPTVPVTEEHVGSGLEC(UniMod:4)PVC(UniMod:4)K3	37798.9	31136.2	32848.7
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	IQALQQQADDAEDR	IQALQQQADDAEDR	2	IQALQQQADDAEDR2	55808.6	60372	62970.9
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	IQALQQQADDAEDR	IQALQQQADDAEDR	3	IQALQQQADDAEDR3	1.58157e+06	1.79637e+06	1.94475e+06
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	IQALQQQADDAEDRAQGLQR	IQALQQQADDAEDRAQGLQR	3	IQALQQQADDAEDRAQGLQR3	6.84418e+06	8.7186e+06	9.46632e+06
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	IQALQQQADDAEDRAQGLQR	IQALQQQADDAEDRAQGLQR	4	IQALQQQADDAEDRAQGLQR4	31418.7	51156.9	55531.3
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	IQALSGSLR	IQALSGSLR	2	IQALSGSLR2	1.56964e+06	1.95521e+06	1.73641e+06
Q9WU74	Q9WU74	LSR_RAT	Lsr	Lipolysis-stimulated lipoprotein receptor	1	IQANQQDDSMR	IQANQQDDSMR	2	IQANQQDDSMR2	2259.43	3564.89	
P52632	P52632	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	1	IQAQFAQLAQLNPQER	IQAQFAQLAQLNPQER	2	IQAQFAQLAQLNPQER2	17201.1	17248.8	19199.5
P52632	P52632	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	1	IQAQFAQLAQLNPQER	IQAQFAQLAQLNPQER	3	IQAQFAQLAQLNPQER3	26486.8	21496.4	30242.7
Q5XFX0	Q5XFX0	TAGL2_RAT	Tagln2	Transgelin-2	1	IQASTMAFK	IQASTMAFK	2	IQASTMAFK2	1.39538e+06	1.28082e+06	1.33826e+06
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	IQASVATNSIASTTVPLENQ	IQASVATNSIASTTVPLENQ	3	IQASVATNSIASTTVPLENQ3	56538.5	55121.2	50242.8
Q5BJW9	Q5BJW9	DJC25_RAT	Dnajc25	DnaJ homolog subfamily C member 25	1	IQATEIAK	IQATEIAK	2	IQATEIAK2	15720.9	19325.6	19116.2
P83953	P83953	IMA5_RAT	Kpna1	Importin subunit alpha-5	1	IQAVIDAGVCR	IQAVIDAGVC(UniMod:4)R	2	IQAVIDAGVC(UniMod:4)R2	31961	30993	25680.6
A0A0G2JZS1	A0A0G2JZS1	A0A0G2JZS1_RAT	Kpna6	Importin subunit alpha	1	IQAVIDSGVCR	IQAVIDSGVC(UniMod:4)R	2	IQAVIDSGVC(UniMod:4)R2	25576.9	14979.2	27039.8
D4A589	D4A589	D4A589_RAT	Smg6	Telomerase-binding protein EST1A	1	IQAVLEDQSQMR	IQAVLEDQSQMR	2	IQAVLEDQSQMR2	1552.71		3381.24
P62747	P62747	RHOB_RAT	Rhob	Rho-related GTP-binding protein RhoB	1	IQAYDYLECSAK	IQAYDYLEC(UniMod:4)SAK	2	IQAYDYLEC(UniMod:4)SAK2	68263.9	58742.2	63450.1
O35568	O35568	FBLN3_RAT	Efemp1	EGF-containing fibulin-like extracellular matrix protein 1	1	IQCAAGYEQSEHNVCQDIDECTSGTHNCR	IQC(UniMod:4)AAGYEQSEHNVC(UniMod:4)QDIDEC(UniMod:4)TSGTHNC(UniMod:4)R	4	IQC(UniMod:4)AAGYEQSEHNVC(UniMod:4)QDIDEC(UniMod:4)TSGTHNC(UniMod:4)R4	3526.26	3447.85	2199.78
B0BNI5	B0BNI5	OLFL3_RAT	Olfml3	Olfactomedin-like protein 3	1	IQCSFDASGTLTPER	IQC(UniMod:4)SFDASGTLTPER	2	IQC(UniMod:4)SFDASGTLTPER2	19507.4	13244.7	13952.9
A0A8I5ZM23	A0A8I5ZM23	A0A8I5ZM23_RAT	Mmab	Metabolism of cobalamin associated B	1	IQCTLQDVGSALATPR	IQC(UniMod:4)TLQDVGSALATPR	2	IQC(UniMod:4)TLQDVGSALATPR2	1976.74		1785.82
A0A8I5ZM23	A0A8I5ZM23	A0A8I5ZM23_RAT	Mmab	Metabolism of cobalamin associated B	1	IQCTLQDVGSALATPR	IQC(UniMod:4)TLQDVGSALATPR	3	IQC(UniMod:4)TLQDVGSALATPR3	1572.58	2907.47	3754.89
G3V9R2	A0A0G2K975;G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	0	IQCVDGK	IQC(UniMod:4)VDGK	1	IQC(UniMod:4)VDGK1	6857.51	4612.43	4234.04
G3V9R2	A0A0G2K975;G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	0	IQCVDGK	IQC(UniMod:4)VDGK	2	IQC(UniMod:4)VDGK2	317474	198145	224404
A0A8I6AGL0	A0A8I6AGL0	A0A8I6AGL0_RAT	Ankrd44	Ankyrin repeat domain 44	1	IQDESLINAK	IQDESLINAK	2	IQDESLINAK2	8624.08	3325.32	9859.73
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	IQDGLGELKK	IQDGLGELKK	2	IQDGLGELKK2	14343.4	18200.6	18602.1
D4A0T9	D4A0T9	D4A0T9_RAT	Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	1	IQDHYIVSGK	IQDHYIVSGK	3	IQDHYIVSGK3	4323.91	5576.51	3655.93
P62986	A0A8I6AN99;P62986;P0CG51;Q63429;A0A8I6A1Y5;P62982;A0A8I6A5Y3	RL40_RAT	Uba52	Ubiquitin-ribosomal protein eL40 fusion protein	0	IQDKEGIPPDQQR	IQDKEGIPPDQQR	3	IQDKEGIPPDQQR3	250391	124723	90721
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	IQDLAIR	IQDLAIR	2	IQDLAIR2	128672	128929	114845
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	IQDLEHHLGLALSEVQAAK	IQDLEHHLGLALSEVQAAK	3	IQDLEHHLGLALSEVQAAK3	45400.2	51452.8	37244.9
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	IQDLEHHLGLALSEVQAAK	IQDLEHHLGLALSEVQAAK	4	IQDLEHHLGLALSEVQAAK4	66789.4	88393.5	85426.8
Q5PQS4	Q5PQS4	GULP1_RAT	Gulp1	PTB domain-containing engulfment adapter protein 1	1	IQDLETENMELK	IQDLETENMELK	2	IQDLETENMELK2	3097.74	4064.46	6494.5
D3ZL10	D3ZL10	D3ZL10_RAT	Col6a6	Collagen type VI alpha 6 chain	1	IQDLSPHVGQAYTGAALR	IQDLSPHVGQAYTGAALR	3	IQDLSPHVGQAYTGAALR3	8156.24	6269.18	9384.83
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	IQDMVAIR	IQDMVAIR	2	IQDMVAIR2	62479	74852	69036.2
Q68FP2	Q68FP2	PON3_RAT	Pon3	Serum paraoxonase/lactonase 3	1	IQDPLSDNPR	IQDPLSDNPR	2	IQDPLSDNPR2	74560.8	62414.5	64980.3
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	IQDPQRGEVLTFK	IQDPQRGEVLTFK	3	IQDPQRGEVLTFK3	22588	36681.5	21774.9
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	IQDWQSIYQSTHIPIPK	IQDWQSIYQSTHIPIPK	3	IQDWQSIYQSTHIPIPK3	22868.1	17257.4	14739.3
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	IQDYDVSLDK	IQDYDVSLDK	2	IQDYDVSLDK2	26687.7	31015.5	29528.5
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	IQDYHILTR	IQDYHILTR	2	IQDYHILTR2		5496.89	
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	IQDYHILTR	IQDYHILTR	3	IQDYHILTR3	37124.4	53613.3	62518.9
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	IQEAGTEVVK	IQEAGTEVVK	2	IQEAGTEVVK2	1.19194e+06	1.10631e+06	1.13399e+06
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	IQEAILAR	IQEAILAR	2	IQEAILAR2	3319.79	4578.98	4213.45
Q6AY97	Q6AY97	CCD91_RAT	Ccdc91	Coiled-coil domain-containing protein 91	1	IQEALTQQSQEQK	IQEALTQQSQEQK	2	IQEALTQQSQEQK2	10250.1	11280.2	8398.62
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	IQEASPPVSGSFDIQVHGHTLK	IQEASPPVSGSFDIQVHGHTLK	3	IQEASPPVSGSFDIQVHGHTLK3	16552.2	10183.5	20651.2
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	IQEASPPVSGSFDIQVHGHTLK	IQEASPPVSGSFDIQVHGHTLK	4	IQEASPPVSGSFDIQVHGHTLK4	65992.8	75025.6	56888.1
Q3MIE7	Q3MIE7	Q3MIE7_RAT	Commd9	COMM domain containing 9	1	IQEDPSLCGEKPSISAVTVELSK	IQEDPSLC(UniMod:4)GEKPSISAVTVELSK	3	IQEDPSLC(UniMod:4)GEKPSISAVTVELSK3	1712.33	1746.63	1685.63
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	IQEEGTGVEETGK	IQEEGTGVEETGK	2	IQEEGTGVEETGK2	15721.1	14515.6	15773.1
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	IQEEILVHIR	IQEEILVHIR	3	IQEEILVHIR3	12643.2	14689.7	14440.8
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	IQEEMEK	IQEEMEK	2	IQEEMEK2	12684.3		10935.6
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	IQEEMEKER	IQEEMEKER	3	IQEEMEKER3	21675	18943.6	
A0A8J8YGQ6	A0A8J8YGQ6	A0A8J8YGQ6_RAT	Dhrsx	Dehydrogenase/reductase X-linked	1	IQEESGPESAHFLFLDLASLSSVR	IQEESGPESAHFLFLDLASLSSVR	3	IQEESGPESAHFLFLDLASLSSVR3	8272.71	11355.6	
P61751	P61751	ARF4_RAT	Arf4	ADP-ribosylation factor 4	1	IQEGAAVLQK	IQEGAAVLQK	2	IQEGAAVLQK2	265765	230356	261661
Q32Q07	Q32Q07	LRRN1_RAT	Lrrn1	Leucine-rich repeat neuronal protein 1	1	IQEGDFK	IQEGDFK	2	IQEGDFK2	19857.9	12853.2	16559.8
P07633	P07633	PCCB_RAT	Pccb	Propionyl-CoA carboxylase beta chain, mitochondrial	1	IQEGVESLAGYADIFLR	IQEGVESLAGYADIFLR	2	IQEGVESLAGYADIFLR2	3389.34		5925.51
P07633	P07633	PCCB_RAT	Pccb	Propionyl-CoA carboxylase beta chain, mitochondrial	1	IQEGVESLAGYADIFLR	IQEGVESLAGYADIFLR	3	IQEGVESLAGYADIFLR3	1510.82	1696.79	1182.51
P05712	P05712	RAB2A_RAT	Rab2a	Ras-related protein Rab-2A	1	IQEGVFDINNEANGIK	IQEGVFDINNEANGIK	2	IQEGVFDINNEANGIK2	103558	98610.6	91184.2
P05712	P05712	RAB2A_RAT	Rab2a	Ras-related protein Rab-2A	1	IQEGVFDINNEANGIK	IQEGVFDINNEANGIK	3	IQEGVFDINNEANGIK3	22436.8	10337.6	26635.2
P51111	P51111	HD_RAT	Htt	Huntingtin	1	IQEHLQNTGLAQR	IQEHLQNTGLAQR	3	IQEHLQNTGLAQR3	56308.3	51878.4	41035.7
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	IQEITEQLDITTSEYEKEK	IQEITEQLDITTSEYEKEK	3	IQEITEQLDITTSEYEKEK3	25295.2	14688.5	27476.1
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	IQELEHQR	IQELEHQR	2	IQELEHQR2		14955.8	
Q8VHI8	Q8VHI8	SEC20_RAT	Bnip1	Vesicle transport protein SEC20	1	IQELEQSAK	IQELEQSAK	2	IQELEQSAK2	26666.2	30006.6	29217.9
Q4V7F5	Q4V7F5	PIHD1_RAT	Pih1d1	PIH1 domain-containing protein 1	1	IQELGTLDTHDSLGTR	IQELGTLDTHDSLGTR	3	IQELGTLDTHDSLGTR3	6905.5	6954	9626.94
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	IQELMETK	IQELMETK	2	IQELMETK2	10103.7	9540.14	
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	IQELQEEVHQLQEK	IQELQEEVHQLQEK	3	IQELQEEVHQLQEK3	12061.1	16802.4	14589.4
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	IQELQSEK	IQELQSEK	2	IQELQSEK2	23726.2	22991.7	15193.3
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	IQELQSEKETLSTQLDLAETK	IQELQSEKETLSTQLDLAETK	3	IQELQSEKETLSTQLDLAETK3	2036.96		7144.3
P51111	P51111	HD_RAT	Htt	Huntingtin	1	IQELSFSPYLISCPVINR	IQELSFSPYLISC(UniMod:4)PVINR	3	IQELSFSPYLISC(UniMod:4)PVINR3	14143.7	22406.7	12324.8
Q63556	Q63556	SPA3M_RAT	Serpina3m	Serine protease inhibitor A3M (Fragment)	1	IQELVSGLK	IQELVSGLK	2	IQELVSGLK2	703259	612914	670458
Q63556	Q63556	SPA3M_RAT	Serpina3m	Serine protease inhibitor A3M (Fragment)	1	IQELVSGLKER	IQELVSGLKER	3	IQELVSGLKER3	10184.6	5595.21	11249.1
Q8R511	M0R6A8;M0R606;M0R6H0;A0A8I5YBW1;A0A0G2K9M1;A0A8I5ZSC4;A0A8I5Y9T1;A0A8I6A1P3;Q4JFV4;M0RAH1;A0A0G2JVX1;M0R7G2;F7F9J5;A0A0G2K433;Q6QI38;Q6QI82;A0A8I5YC17;A0A0G2K1W6;A0A8I6ASW1;A0A8I6AUZ5;A0A8I6GDK9;A0A8I6AJ21;A0A0G2K002;A0A8I5ZVF4;A0A8I5ZLT0;Q8R511;M0RD43	FNBP1_RAT	Fnbp1	Formin-binding protein 1	0	IQEMEER	IQEMEER	2	IQEMEER2	71823.1	69893	82344.1
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	IQENHSGLYSCQAENQAGR	IQENHSGLYSC(UniMod:4)QAENQAGR	3	IQENHSGLYSC(UniMod:4)QAENQAGR3	12230	16278	14901.8
A0A8I5ZMG6	Q80W83;A0A8I5ZMG6	A0A8I5ZMG6_RAT	Ppp2r5e	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	0	IQEPLFK	IQEPLFK	2	IQEPLFK2	50377.4	43176.4	29685.3
Q32KJ5	Q32KJ5	Q32KJ5_RAT	Gns	N-acetylglucosamine-6-sulfatase	1	IQEPYTFPAILK	IQEPYTFPAILK	2	IQEPYTFPAILK2	17084.2	22423	20077.5
F1M7L9	F1M7L9	PKP2_RAT	Pkp2	Plakophilin-2	1	IQEQVQQTLAR	IQEQVQQTLAR	2	IQEQVQQTLAR2	8054.56	8834.36	4359.6
P11505	P11505	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	1	IQESYGDVYGICTK	IQESYGDVYGIC(UniMod:4)TK	2	IQESYGDVYGIC(UniMod:4)TK2	12560.2	19346.7	9888.98
Q5M929	Q5M929	RN135_RAT	Rnf135	E3 ubiquitin-protein ligase RNF135	1	IQETLQGSVTGNEAPK	IQETLQGSVTGNEAPK	2	IQETLQGSVTGNEAPK2	1404.93		1728.47
Q02293	Q02293	FNTB_RAT	Fntb	Protein farnesyltransferase subunit beta	1	IQEVFSSYK	IQEVFSSYK	2	IQEVFSSYK2	5728.96	6128.83	1280.78
Q7TP42	Q7TP42	Q7TP42_RAT	Sec62	Translocation protein SEC62	1	IQEVGEPSK	IQEVGEPSK	2	IQEVGEPSK2	13637.3	12191.7	23963.3
Q7TP42	Q7TP42	Q7TP42_RAT	Sec62	Translocation protein SEC62	1	IQEVGEPSKEEK	IQEVGEPSKEEK	2	IQEVGEPSKEEK2	23906.2	17005.9	23974.5
Q7TP42	Q7TP42	Q7TP42_RAT	Sec62	Translocation protein SEC62	1	IQEVGEPSKEEK	IQEVGEPSKEEK	3	IQEVGEPSKEEK3	114969	82892.4	93797.6
F1LXA0	F1LXA0	F1LXA0_RAT	Ndufa12	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	1	IQEWVPPSTPYK	IQEWVPPSTPYK	2	IQEWVPPSTPYK2		88546.2	60903.3
Q6P7P5	Q6P7P5	5MP2_RAT	Bzw1	eIF5-mimic protein 2	1	IQEYCYDNIHFMK	IQEYC(UniMod:4)YDNIHFMK	3	IQEYC(UniMod:4)YDNIHFMK3	4566.78	12719.3	
A0A8I6GM43	A0A8I6GM43	A0A8I6GM43_RAT	Pbdc1	Polysaccharide biosynthesis domain containing 1	1	IQFFAIEIAR	IQFFAIEIAR	2	IQFFAIEIAR2	30387.5	27888.2	18000.9
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	IQFGTLSDYFDALEK	IQFGTLSDYFDALEK	2	IQFGTLSDYFDALEK2	15453.2	24970.1	23017.9
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	IQFGTLSDYFDALEK	IQFGTLSDYFDALEK	3	IQFGTLSDYFDALEK3		1678.1	
A0A8I5ZN89	A0A8I5ZN89	A0A8I5ZN89_RAT	Gcdh	Glutaryl-CoA dehydrogenase	1	IQFGVPLAR	IQFGVPLAR	2	IQFGVPLAR2	37451.8	30847.5	33051.7
G3V728	G3V728	G3V728_RAT	Nipsnap1	Nipsnap homolog 1	1	IQFHNVKPECLDAYNSLTEAVLPK	IQFHNVKPEC(UniMod:4)LDAYNSLTEAVLPK	3	IQFHNVKPEC(UniMod:4)LDAYNSLTEAVLPK3	4634.26	2718.78	3581.39
G3V728	G3V728	G3V728_RAT	Nipsnap1	Nipsnap homolog 1	1	IQFHNVKPECLDAYNSLTEAVLPK	IQFHNVKPEC(UniMod:4)LDAYNSLTEAVLPK	4	IQFHNVKPEC(UniMod:4)LDAYNSLTEAVLPK4	38393.8	47026.5	36769.9
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	IQFMCGEDPSNAMPVIFGK	IQFMC(UniMod:4)GEDPSNAMPVIFGK	3	IQFMC(UniMod:4)GEDPSNAMPVIFGK3	11873.4	14407.9	13504.3
F1LRE5	F1LRE5	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	1	IQFNAHIWTK	IQFNAHIWTK	3	IQFNAHIWTK3	6018.48	6885.13	11166.3
P10888	P10888	COX41_RAT	Cox4i1	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial	1	IQFNESFAEMNK	IQFNESFAEMNK	2	IQFNESFAEMNK2	187517	169644	191621
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	IQFVGACNPPTDPGR	IQFVGAC(UniMod:4)NPPTDPGR	2	IQFVGAC(UniMod:4)NPPTDPGR2	299639	299932	241886
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	IQFVGACNPPTDPGR	IQFVGAC(UniMod:4)NPPTDPGR	3	IQFVGAC(UniMod:4)NPPTDPGR3	35771.9	41683.9	46466.6
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	IQGATIPINQAR	IQGATIPINQAR	2	IQGATIPINQAR2	2890.9		2136.52
A0A8I5ZS17	A0A8I5ZS17	A0A8I5ZS17_RAT	Snx25	Sorting nexin 25	1	IQGDVYDVLR	IQGDVYDVLR	2	IQGDVYDVLR2	10685.6	7581.64	3969.45
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	IQGIEEYK	IQGIEEYK	2	IQGIEEYK2	41993.4	31802.4	48049.8
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	IQGLDSSLSLQSK	IQGLDSSLSLQSK	2	IQGLDSSLSLQSK2	6651.88	7884.51	11727
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	IQGLITNLAK	IQGLITNLAK	2	IQGLITNLAK2	2.42333e+06	2.38951e+06	2.617e+06
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	IQGLQGGQK	IQGLQGGQK	2	IQGLQGGQK2	28638.7	39008.2	14112.5
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	IQGMLHPNTR	IQGMLHPNTR	3	IQGMLHPNTR3	12842	14844.2	9901.86
A0A0G2K1A4	A0A0G2K1A4	A0A0G2K1A4_RAT	Evi5l	Ecotropic viral integration site 5-like	1	IQGQLNHSDSSQYIR	IQGQLNHSDSSQYIR	3	IQGQLNHSDSSQYIR3	12865.6	12316.8	16707.3
P10716	P10716	CLC4F_RAT	Clec4f	C-type lectin domain family 4 member F	1	IQGQQSDLEALQK	IQGQQSDLEALQK	2	IQGQQSDLEALQK2	12091.8	9844.63	12174.8
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	IQHATVSR	IQHATVSR	2	IQHATVSR2			15468.1
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	IQHEFQETVALWTQAK	IQHEFQETVALWTQAK	3	IQHEFQETVALWTQAK3	9501.87	13960.8	
D3ZLZ7	D3ZLZ7	IMDH1_RAT	Impdh1	Inosine-5'-monophosphate dehydrogenase 1	1	IQHGFSGIPITATGTMGSK	IQHGFSGIPITATGTMGSK	3	IQHGFSGIPITATGTMGSK3	11519.5	11456.9	14518.1
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	IQHGQCAYTFILPEHDGNCR	IQHGQC(UniMod:4)AYTFILPEHDGNC(UniMod:4)R	3	IQHGQC(UniMod:4)AYTFILPEHDGNC(UniMod:4)R3	62442.1	58011.9	48195.2
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	IQHGQCAYTFILPEHDGNCR	IQHGQC(UniMod:4)AYTFILPEHDGNC(UniMod:4)R	4	IQHGQC(UniMod:4)AYTFILPEHDGNC(UniMod:4)R4	179294	189575	230586
F7ETN7	F7ETN7	F7ETN7_RAT	B4galt7	Beta-1,4-galactosyltransferase	1	IQHHIYVLNQVDHFR	IQHHIYVLNQVDHFR	4	IQHHIYVLNQVDHFR4	5739.47	6898.17	6199.13
B2RZ78	B2RZ78	VPS29_RAT	Vps29	Vacuolar protein sorting-associated protein 29	1	IQHILCTGNLCTK	IQHILC(UniMod:4)TGNLC(UniMod:4)TK	2	IQHILC(UniMod:4)TGNLC(UniMod:4)TK2	21040.2	15337.9	8603.35
B2RZ78	B2RZ78	VPS29_RAT	Vps29	Vacuolar protein sorting-associated protein 29	1	IQHILCTGNLCTK	IQHILC(UniMod:4)TGNLC(UniMod:4)TK	3	IQHILC(UniMod:4)TGNLC(UniMod:4)TK3	28078.2	34598.7	27359.4
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	IQHLQPTVQEK	IQHLQPTVQEK	2	IQHLQPTVQEK2	1686.85	3985.4	
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	IQHLQPTVQEK	IQHLQPTVQEK	3	IQHLQPTVQEK3	25788.2	16916.3	19153.3
Q5U2R3	Q5U2R3	FRMD8_RAT	Frmd8	FERM domain-containing protein 8	1	IQHLSTIDYVEDGSGIK	IQHLSTIDYVEDGSGIK	3	IQHLSTIDYVEDGSGIK3	10207.9	12488	11106.3
Q5U2R3	Q5U2R3	FRMD8_RAT	Frmd8	FERM domain-containing protein 8	1	IQHLSTIDYVEDGSGIKR	IQHLSTIDYVEDGSGIKR	4	IQHLSTIDYVEDGSGIKR4	1930.69	6213.28	3460.16
Q6AY86	Q6AY86	VP26A_RAT	Vps26a	Vacuolar protein sorting-associated protein 26A	1	IQHMELQLIK	IQHMELQLIK	3	IQHMELQLIK3	2803.84		3931.26
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	IQHNSDYSYPK	IQHNSDYSYPK	3	IQHNSDYSYPK3	32555.8	24510.8	32379.6
P47824	P47824	P2RX1_RAT	P2rx1	P2X purinoceptor 1	1	IQHPLCPVFNLGYVVR	IQHPLC(UniMod:4)PVFNLGYVVR	2	IQHPLC(UniMod:4)PVFNLGYVVR2	6655.21	15820.1	5093.07
P47824	P47824	P2RX1_RAT	P2rx1	P2X purinoceptor 1	1	IQHPLCPVFNLGYVVR	IQHPLC(UniMod:4)PVFNLGYVVR	3	IQHPLC(UniMod:4)PVFNLGYVVR3	116947	110724	135299
P61972	P61972	NTF2_RAT	Nutf2	Nuclear transport factor 2	1	IQHSITAQDHQPTPDSCIISMVVGQLK	IQHSITAQDHQPTPDSC(UniMod:4)IISMVVGQLK	4	IQHSITAQDHQPTPDSC(UniMod:4)IISMVVGQLK4	20377.1	13016.5	25454.7
D4ADM2	D4ADM2	D4ADM2_RAT	Pan3	PAN2-PAN3 deadenylation complex subunit PAN3	1	IQHSNIVTLR	IQHSNIVTLR	3	IQHSNIVTLR3	16166.9	18268.8	16262.3
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	IQHVVESVR	IQHVVESVR	2	IQHVVESVR2	10105.8	11698.9	9474.2
D3ZKE0	D3ZKE0	D3ZKE0_RAT	Gnptab	N-acetylglucosamine-1-phosphate transferase subunits alpha and beta	1	IQIAVEVDTR	IQIAVEVDTR	2	IQIAVEVDTR2	33105.7	14500.1	27936.8
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	IQIFPVDSAIDTISPLNQK	IQIFPVDSAIDTISPLNQK	3	IQIFPVDSAIDTISPLNQK3	4276.38	4814.46	2631.5
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	IQIGTQAIER	IQIGTQAIER	2	IQIGTQAIER2	38236.3		10408.1
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	IQIIGLGTQVSQRPGAQALK	IQIIGLGTQVSQRPGAQALK	3	IQIIGLGTQVSQRPGAQALK3	40384.1	58717.9	47203.2
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	IQIMLLR	IQIMLLR	2	IQIMLLR2	7418.6	17275.6	14682.2
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	IQINNSENTLR	IQINNSENTLR	2	IQINNSENTLR2	39727.6	49366.9	39267.4
P61805	P61805	DAD1_RAT	Dad1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1	1	IQINPQNK	IQINPQNK	2	IQINPQNK2	23779.3	25801.2	19878.9
Q9JMA8	Q9JMA8	Q9JMA8_RAT	Extl3	Exostosin-like glycosyltransferase 3	1	IQIPAAPIREEVAAEIPHR	IQIPAAPIREEVAAEIPHR	4	IQIPAAPIREEVAAEIPHR4		2383.79	4092.38
D4A929	D4A929	WDR81_RAT	Wdr81	WD repeat-containing protein 81	1	IQIPDSQPQSSGPLGSISGVGSGGLSSR	IQIPDSQPQSSGPLGSISGVGSGGLSSR	3	IQIPDSQPQSSGPLGSISGVGSGGLSSR3		3148.02	1790.32
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	IQIPRPDDPSNQIK	IQIPRPDDPSNQIK	3	IQIPRPDDPSNQIK3	46074.4	54790.9	42000.5
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	IQIQNQIHGAIFPFVFYPIKPPR	IQIQNQIHGAIFPFVFYPIKPPR	4	IQIQNQIHGAIFPFVFYPIKPPR4	14883.4	11886.9	14213
P35289	P35289	RAB15_RAT	Rab15	Ras-related protein Rab-15	1	IQIWDTAGQER	IQIWDTAGQER	2	IQIWDTAGQER2	4.52369e+06		5.0475e+06
P35289	P35289	RAB15_RAT	Rab15	Ras-related protein Rab-15	1	IQIWDTAGQER	IQIWDTAGQER	3	IQIWDTAGQER3		50258	67964.9
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	IQKDPSVLTVR	IQKDPSVLTVR	3	IQKDPSVLTVR3	6705.47	7411.99	6313.47
Q29RW1	Q29RW1	MYH4_RAT	Myh4	Myosin-4	1	IQLELNQVK	IQLELNQVK	2	IQLELNQVK2	9808.94	14890.4	7527.4
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	IQLEPLPPLTPK	IQLEPLPPLTPK	2	IQLEPLPPLTPK2	25205.3	23600.1	25131.5
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	IQLEQVQEWK	IQLEQVQEWK	2	IQLEQVQEWK2	237916	195597	183635
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	IQLHSDLPWWLILIR	IQLHSDLPWWLILIR	3	IQLHSDLPWWLILIR3		2702.53	3549.24
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	IQLIESISR	IQLIESISR	2	IQLIESISR2	26044.6	29156.8	21108.3
P16617	A0A8I6A6N5;P16617;M0R6Y8	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	0	IQLINNMLDK	IQLINNMLDK	2	IQLINNMLDK2	67153.7	57972.6	41094
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	IQLKDWSGR	IQLKDWSGR	2	IQLKDWSGR2	16047	12323.4	10655
D4A746	D4A746	D4A746_RAT	Gmppb	GDP-mannose pyrophosphorylase B	1	IQLKPTSIEK	IQLKPTSIEK	3	IQLKPTSIEK3	11923.7	9892.09	
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	IQLLCLMEMTFTR	IQLLC(UniMod:4)LMEMTFTR	3	IQLLC(UniMod:4)LMEMTFTR3	1230.61		
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	IQLLCLMEMTFTRPANHR	IQLLC(UniMod:4)LMEMTFTRPANHR	3	IQLLC(UniMod:4)LMEMTFTRPANHR3	58060.3	90933.3	93392.9
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	IQLLCLMEMTFTRPANHR	IQLLC(UniMod:4)LMEMTFTRPANHR	4	IQLLC(UniMod:4)LMEMTFTRPANHR4	52717	60123	76949.4
A0A8J8YRV3	A0A8J8YRV3	A0A8J8YRV3_RAT	Drg1	Developmentally regulated GTP binding protein 1	1	IQLLDLPGIIEGAK	IQLLDLPGIIEGAK	2	IQLLDLPGIIEGAK2	21619.8	26507.9	21795.3
A0A8J8YRV3	A0A8J8YRV3	A0A8J8YRV3_RAT	Drg1	Developmentally regulated GTP binding protein 1	1	IQLLDLPGIIEGAK	IQLLDLPGIIEGAK	3	IQLLDLPGIIEGAK3		3316.4	3049.97
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	IQLLVFK	IQLLVFK	2	IQLLVFK2	89085.8	94386	80443.8
D3ZLT7	D3ZLT7	D3ZLT7_RAT	Kiaa2013	Similar to RIKEN cDNA 2510039O18	1	IQLNNPTER	IQLNNPTER	2	IQLNNPTER2	15435.8	19781.6	17568.6
D4A7L4	D4A7L4	D4A7L4_RAT	Ndufb11	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial	1	IQLPEDD	IQLPEDD	1	IQLPEDD1	127550	99987.3	129922
A0A8I6ANR6	A0A8I6ANR6	A0A8I6ANR6_RAT	Chuk	IkappaB kinase	1	IQLPVTQLR	IQLPVTQLR	2	IQLPVTQLR2	20101.7	15611.5	16971.6
Q63372	Q63372	NRX1A_RAT	Nrxn1	Neurexin-1	1	IQLPVVMHTEAEDVSLR	IQLPVVMHTEAEDVSLR	3	IQLPVVMHTEAEDVSLR3	34553.4	19686.5	22763.2
A0A0G2K5L2	Q505J6;A0A0G2K5L2	GHC1_RAT	Slc25a22	Mitochondrial glutamate carrier 1	0	IQLQDAGR	IQLQDAGR	2	IQLQDAGR2	11502.4	6019.34	6770.65
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	IQLQEDINAYFR	IQLQEDINAYFR	2	IQLQEDINAYFR2	60632.4	46398.4	48653.4
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	IQLSEALCGFK	IQLSEALC(UniMod:4)GFK	2	IQLSEALC(UniMod:4)GFK2	161007	128824	136364
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	IQLSEALCGFKK	IQLSEALC(UniMod:4)GFKK	3	IQLSEALC(UniMod:4)GFKK3	31610.2	33623.3	36004
P14740	P14740	DPP4_RAT	Dpp4	Dipeptidyl peptidase 4	1	IQLTDHTNKK	IQLTDHTNKK	3	IQLTDHTNKK3			6554
Q9EQX6	Q9EQX6	PDGFC_RAT	Pdgfc	Platelet-derived growth factor C	1	IQLTFDER	IQLTFDER	2	IQLTFDER2	67670.9	71170.6	64317.6
Q9QUR2	Q9QUR2	DCTN4_RAT	Dctn4	Dynactin subunit 4	1	IQLVAVNYIPEVR	IQLVAVNYIPEVR	2	IQLVAVNYIPEVR2	86385.4	69243.9	76933.6
Q9QUR2	Q9QUR2	DCTN4_RAT	Dctn4	Dynactin subunit 4	1	IQLVAVNYIPEVR	IQLVAVNYIPEVR	3	IQLVAVNYIPEVR3	15746.4	17644.3	20173.8
Q63610	Q63610;P58775;P09495;P04692	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	0	IQLVEEELDR	IQLVEEELDR	2	IQLVEEELDR2	345724	332382	257735
Q63610	Q63610;P58775;P09495;P04692	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	0	IQLVEEELDR	IQLVEEELDR	3	IQLVEEELDR3	2902.2	3399.42	2744.63
Q63610	Q63610;P58775;P09495;P04692	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	0	IQLVEEELDRAQER	IQLVEEELDRAQER	2	IQLVEEELDRAQER2	116887	122291	131507
Q63610	Q63610;P58775;P09495;P04692	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	0	IQLVEEELDRAQER	IQLVEEELDRAQER	3	IQLVEEELDRAQER3	2.54556e+07	431276	3.04521e+07
F1LW77	F1LW77	F1LW77_RAT	Rab33b	RAB33B, member RAS oncogene family	1	IQLWDTAGQER	IQLWDTAGQER	3	IQLWDTAGQER3		50258	67964.9
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	IQLWEFFQVDVQK	IQLWEFFQVDVQK	2	IQLWEFFQVDVQK2			13820
A0A8I5Y4X4	A0A8I5Y4X4	A0A8I5Y4X4_RAT	Nub1	Negative regulator of ubiquitin-like proteins 1	1	IQLWKPPYTEENKEVGLALK	IQLWKPPYTEENKEVGLALK	4	IQLWKPPYTEENKEVGLALK4	33895.9	44920.9	28376.6
Q63663	Q63663	GBP2_RAT	Gbp2	Guanylate-binding protein 2	1	IQMPTETLQELLDLHR	IQMPTETLQELLDLHR	2	IQMPTETLQELLDLHR2		3160.86	4277.19
Q63663	Q63663	GBP2_RAT	Gbp2	Guanylate-binding protein 2	1	IQMPTETLQELLDLHR	IQMPTETLQELLDLHR	3	IQMPTETLQELLDLHR3	31294.6	32789.9	28159
Q6PCU2	Q6PCU2	VATE1_RAT	Atp6v1e1	V-type proton ATPase subunit E 1	1	IQMSNLMNQAR	IQMSNLMNQAR	2	IQMSNLMNQAR2	57594.3	37496.9	44593.8
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	IQMSSVESQNALLR	IQMSSVESQNALLR	2	IQMSSVESQNALLR2	3911.02	7543.2	4010.67
A0A8I6A822	A0A8I6A822	A0A8I6A822_RAT	Tm9sf3	Transmembrane 9 superfamily member	1	IQMSYSVK	IQMSYSVK	2	IQMSYSVK2	69878.2	77583.2	69085.7
Q63632	Q63632	S12A4_RAT	Slc12a4	Solute carrier family 12 member 4	1	IQMTWTR	IQMTWTR	2	IQMTWTR2	8251.84	10708.7	12477.4
P35815	P20650;P35815	PPM1B_RAT	Ppm1b	Protein phosphatase 1B	0	IQNAGGSVMIQR	IQNAGGSVMIQR	2	IQNAGGSVMIQR2	59555.3	68088	80917.4
B1WBZ6	B1WBZ6	B1WBZ6_RAT	RGD1565685	RGD1565685 protein	1	IQNFLYEFK	IQNFLYEFK	2	IQNFLYEFK2	8021.39	11268	11352.2
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	IQNGALNCEEK	IQNGALNC(UniMod:4)EEK	2	IQNGALNC(UniMod:4)EEK2	20858.9	22182.9	23117.4
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	IQNGQSLEGCFQVIK	IQNGQSLEGC(UniMod:4)FQVIK	2	IQNGQSLEGC(UniMod:4)FQVIK2	5946.66	3816.2	3886.93
Q704E8	Q704E8	ABCB7_RAT	Abcb7	Iron-sulfur clusters transporter ABCB7, mitochondrial	1	IQNHDNLGWDAK	IQNHDNLGWDAK	3	IQNHDNLGWDAK3	22855.7	19108.9	19529
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	IQNIGEQGHMALLGHSLGAYISTLDKEK	IQNIGEQGHMALLGHSLGAYISTLDKEK	4	IQNIGEQGHMALLGHSLGAYISTLDKEK4	3955.27	5846.12	6013.2
Q6J1Y9	Q6J1Y9	UBP19_RAT	Usp19	Ubiquitin carboxyl-terminal hydrolase 19	1	IQNKPYTETVDSDGRPDEVVAEEAWQR	IQNKPYTETVDSDGRPDEVVAEEAWQR	4	IQNKPYTETVDSDGRPDEVVAEEAWQR4	1779.02	2459.54	1774.64
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	IQNLEALLQK	IQNLEALLQK	2	IQNLEALLQK2	62989.2	53096.1	56158.6
Q4KLI9	Q4KLI9	FBXW5_RAT	Fbxw5	F-box/WD repeat-containing protein 5	1	IQNLNASTIR	IQNLNASTIR	2	IQNLNASTIR2	10120.5	10811.1	10136.4
Q6TMA8	Q6TMA8	ANGL4_RAT	Angptl4	Angiopoietin-related protein 4	1	IQNLQSQIDLLTPTHLDNGVDK	IQNLQSQIDLLTPTHLDNGVDK	3	IQNLQSQIDLLTPTHLDNGVDK3	4486.45		3877.05
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	IQNPQILK	IQNPQILK	2	IQNPQILK2	59248.4	74491	64104.4
P15684	P15684	AMPN_RAT	Anpep	Aminopeptidase N	1	IQNQLQTDLSVIPVINR	IQNQLQTDLSVIPVINR	2	IQNQLQTDLSVIPVINR2	7577.01	6862.91	7969.93
P15684	P15684	AMPN_RAT	Anpep	Aminopeptidase N	1	IQNQLQTDLSVIPVINR	IQNQLQTDLSVIPVINR	3	IQNQLQTDLSVIPVINR3	6985.08	5295.19	9996.63
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	IQNSFEK	IQNSFEK	2	IQNSFEK2	15432.5	22682	15825.8
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	IQNSGDFYDLYGGEK	IQNSGDFYDLYGGEK	2	IQNSGDFYDLYGGEK2	23686.8	17660.6	20735.6
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	IQNTGDYYDLYGGEK	IQNTGDYYDLYGGEK	2	IQNTGDYYDLYGGEK2	67560.6	58017.5	60246.8
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	IQNVVTSFAPQR	IQNVVTSFAPQR	2	IQNVVTSFAPQR2	4815.07	6138.63	5398.23
Q5PQK5	Q5PQK5	Q5PQK5_RAT	Rdx	Radixin	1	IQNWHEEHR	IQNWHEEHR	2	IQNWHEEHR2	3246.19	448.658	1095.8
F7FF81	F7FF81	F7FF81_RAT	Pfdn5	Prefoldin subunit 5	1	IQPALQEK	IQPALQEK	1	IQPALQEK1	3252.11		
F7FF81	F7FF81	F7FF81_RAT	Pfdn5	Prefoldin subunit 5	1	IQPALQEK	IQPALQEK	2	IQPALQEK2	302125	307449	322088
O35346	O35346	FAK1_RAT	Ptk2	Focal adhesion kinase 1	1	IQPAPPEEYVPMVK	IQPAPPEEYVPMVK	2	IQPAPPEEYVPMVK2	17979.1	18243.8	21501.3
E9PT90	E9PT90	E9PT90_RAT	Spart	Spartin	1	IQPEEKPVEVSPAVTR	IQPEEKPVEVSPAVTR	3	IQPEEKPVEVSPAVTR3	55234.9	77524.8	60335.2
D3ZY46	G3V982;D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	0	IQPEILELIK	IQPEILELIK	2	IQPEILELIK2	69675	52460.1	48509
O35854	O35854	BCAT2_RAT	Bcat2	Branched-chain-amino-acid aminotransferase, mitochondrial	1	IQPFQNLTLHPACSGLHYSLQLFEGLK	IQPFQNLTLHPAC(UniMod:4)SGLHYSLQLFEGLK	4	IQPFQNLTLHPAC(UniMod:4)SGLHYSLQLFEGLK4	23755.1	21445.9	19796.4
P62944	P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	IQPGNPNYTLSLK	IQPGNPNYTLSLK	2	IQPGNPNYTLSLK2	144514	147197	128904
P52303	P52303	AP1B1_RAT	Ap1b1	AP-1 complex subunit beta-1	1	IQPGNPSFTLSLK	IQPGNPSFTLSLK	2	IQPGNPSFTLSLK2	218861	187420	151734
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	IQPPTIDQDYAFAFQPMSECQR	IQPPTIDQDYAFAFQPMSEC(UniMod:4)QR	3	IQPPTIDQDYAFAFQPMSEC(UniMod:4)QR3	22155.3	20960.9	13701.9
B2RYN1	B2RYN1	B2RYN1_RAT	Fn3krp	protein-ribulosamine 3-kinase	1	IQPQMDMVEK	IQPQMDMVEK	2	IQPQMDMVEK2		7462.95	13042.1
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	IQPSGGTNINEALLR	IQPSGGTNINEALLR	2	IQPSGGTNINEALLR2	1.06783e+06	1.20104e+06	811630
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	IQPSGGTNINEALLR	IQPSGGTNINEALLR	3	IQPSGGTNINEALLR3	2.06783e+06	2.75066e+06	2.45347e+06
M0RD40	M0RD40	M0RD40_RAT	Sik3	non-specific serine/threonine protein kinase	1	IQPSSPPPNHPSNHLFR	IQPSSPPPNHPSNHLFR	4	IQPSSPPPNHPSNHLFR4	5360.15	2896.46	
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	IQPTSLPK	IQPTSLPK	2	IQPTSLPK2	83906.4	92714.7	82776.4
F1M4J1	F1M4J1	F1M4J1_RAT	LOC100294508	Dyslexia susceptibility 2-like	1	IQPYTEQSTK	IQPYTEQSTK	2	IQPYTEQSTK2	14093.8	18085.7	18008.4
Q63470	Q63470	DYR1A_RAT	Dyrk1a	Dual specificity tyrosine-phosphorylation-regulated kinase 1A	1	IQPYYALQHSFFK	IQPYYALQHSFFK	3	IQPYYALQHSFFK3	16347.1	15067.7	15580.2
A0A8I6AJP4	A0A8I6AJP4	A0A8I6AJP4_RAT	Phactr4	Phosphatase and actin regulator 4	1	IQQALTSPLPVTPPLEGTHR	IQQALTSPLPVTPPLEGTHR	3	IQQALTSPLPVTPPLEGTHR3	5372.79	8146.2	16229
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	IQQCPGTETAEYQSLCPHGR	IQQC(UniMod:4)PGTETAEYQSLC(UniMod:4)PHGR	3	IQQC(UniMod:4)PGTETAEYQSLC(UniMod:4)PHGR3	246454	284457	198868
F7FI79	F7FI79	F7FI79_RAT	Fhip2b	FHF complex subunit HOOK interacting protein 2B	1	IQQDPELLAYILEGK	IQQDPELLAYILEGK	2	IQQDPELLAYILEGK2	5212.43	2210.22	
B2RYG6	B2RYG6	OTUB1_RAT	Otub1	Ubiquitin thioesterase OTUB1	1	IQQEIAVQNPLVSER	IQQEIAVQNPLVSER	2	IQQEIAVQNPLVSER2	22185.3	23382.3	27532
B2RYG6	B2RYG6	OTUB1_RAT	Otub1	Ubiquitin thioesterase OTUB1	1	IQQEIAVQNPLVSER	IQQEIAVQNPLVSER	3	IQQEIAVQNPLVSER3	32691.4	27948.7	45881.9
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	IQQFDDGGSDEEDIWEEK	IQQFDDGGSDEEDIWEEK	3	IQQFDDGGSDEEDIWEEK3		12582.7	9715.7
Q3B7V5	Q3B7V5	Q3B7V5_RAT	Rab2b	RAB2B, member RAS oncogene family	1	IQQGLFDVHNEANGIK	IQQGLFDVHNEANGIK	3	IQQGLFDVHNEANGIK3	9422.84	9246.19	10820.5
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	IQQIAEGEK	IQQIAEGEK	2	IQQIAEGEK2	24022.8	24090.3	
D3ZKX1	D3ZKX1	D3ZKX1_RAT	Washc3	WASH complex subunit 3	1	IQQIETTLNILDAK	IQQIETTLNILDAK	2	IQQIETTLNILDAK2	6761.53	5569.02	8153.6
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	IQQIIEGK	IQQIIEGK	2	IQQIIEGK2	128761	131518	131174
F7EUH5	F7EUH5	F7EUH5_RAT	Plxdc2	Plexin domain containing 2	1	IQQIPNVR	IQQIPNVR	2	IQQIPNVR2	833226	838994	825388
P53676	P53678;P53676	AP3M1_RAT	Ap3m1	AP-3 complex subunit mu-1	0	IQQLAISGLK	IQQLAISGLK	2	IQQLAISGLK2	53162.7	73095.7	65981.7
F7FF81	F7FF81	F7FF81_RAT	Pfdn5	Prefoldin subunit 5	1	IQQLTALGATQATAK	IQQLTALGATQATAK	2	IQQLTALGATQATAK2	69349.9	49072.7	66507
F7FF81	F7FF81	F7FF81_RAT	Pfdn5	Prefoldin subunit 5	1	IQQLTALGATQATAK	IQQLTALGATQATAK	3	IQQLTALGATQATAK3	15744.6	16523.8	13330.4
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	IQQNQSIR	IQQNQSIR	2	IQQNQSIR2	195142	212133	204814
D3ZHA0	D3ZHA0;A0A0G2JXT8;A0A8I5ZV49	FLNC_RAT	Flnc	Filamin-C	0	IQQNTFTR	IQQNTFTR	2	IQQNTFTR2	7.13737e+06	7.64907e+06	8.07091e+06
Q5BJQ2	Q5BJQ2	MINY1_RAT	Mindy1	Ubiquitin carboxyl-terminal hydrolase MINDY-1	1	IQQPDLDFYCVK	IQQPDLDFYC(UniMod:4)VK	2	IQQPDLDFYC(UniMod:4)VK2	47419	64033.9	55461.7
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	IQQQAETTSER	IQQQAETTSER	2	IQQQAETTSER2			11653.6
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	IQQTREALIK	IQQTREALIK	3	IQQTREALIK3	9071.03	8246.69	12236.4
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	IQRLNILNAK	IQRLNILNAK	3	IQRLNILNAK3	15909.1	13916.9	
A0A0G2K542	A0A0G2K542	A0A0G2K542_RAT	Ugp2	UTP--glucose-1-phosphate uridylyltransferase	1	IQRPPEDSIQPYEK	IQRPPEDSIQPYEK	3	IQRPPEDSIQPYEK3	65809.6	54409.7	58995
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	IQRPTQEPVGK	IQRPTQEPVGK	3	IQRPTQEPVGK3	33338.3	25229.4	47093.9
A0A8I6AHV1	A0A8I6AHV1	A0A8I6AHV1_RAT	Ptpn18	protein-tyrosine-phosphatase	1	IQRPVSHTENAQGTTALGR	IQRPVSHTENAQGTTALGR	3	IQRPVSHTENAQGTTALGR3	952.124		
A0A8I6AHV1	A0A8I6AHV1	A0A8I6AHV1_RAT	Ptpn18	protein-tyrosine-phosphatase	1	IQRPVSHTENAQGTTALGR	IQRPVSHTENAQGTTALGR	4	IQRPVSHTENAQGTTALGR4	1442.72	1889.18	1672.61
D3ZQQ1	D3ZQQ1	D3ZQQ1_RAT	Aftph	Aftiphilin	1	IQSEAWSLVDSNENSEAIRR	IQSEAWSLVDSNENSEAIRR	3	IQSEAWSLVDSNENSEAIRR3	2684.83	11963.4	
A0A8I5ZVT2	A0A8I5ZVT2	A0A8I5ZVT2_RAT	Fndc3a	Fibronectin type III domain containing 3a	1	IQSFILEWDEGK	IQSFILEWDEGK	2	IQSFILEWDEGK2	7757.59	4432.32	
D4A9Z2	D4A9Z2	D4A9Z2_RAT	Top3b	DNA topoisomerase	1	IQSFKPETYWVLQAK	IQSFKPETYWVLQAK	3	IQSFKPETYWVLQAK3	4878.76	3749.41	7967.41
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	IQSFPWQVYFESPR	IQSFPWQVYFESPR	2	IQSFPWQVYFESPR2	6.16759e+06	8.51807e+06	7.34462e+06
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	IQSFPWQVYFESPR	IQSFPWQVYFESPR	3	IQSFPWQVYFESPR3	2.75774e+06	2.74925e+06	2.92773e+06
Q66H15	Q66H15	RMD3_RAT	Rmdn3	Regulator of microtubule dynamics protein 3	1	IQSGFSFK	IQSGFSFK	2	IQSGFSFK2	31383.9		35247.5
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	IQSGQSSTVIENIHTIIAAAAVK	IQSGQSSTVIENIHTIIAAAAVK	3	IQSGQSSTVIENIHTIIAAAAVK3	8447.4	8710.97	8196.37
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	IQSGQSSTVIENIHTIIAAAAVK	IQSGQSSTVIENIHTIIAAAAVK	4	IQSGQSSTVIENIHTIIAAAAVK4	3396.28		3865.18
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	IQSIAPSLQVITSK	IQSIAPSLQVITSK	2	IQSIAPSLQVITSK2	32473.3	41887.9	37704.4
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	IQSILSEDPK	IQSILSEDPK	2	IQSILSEDPK2	99997.3	95056.3	97335.4
A0A8I6A5G9	A0A8I6A5G9	A0A8I6A5G9_RAT	Gm2a	GM2 ganglioside activator	1	IQSILSSGGK	IQSILSSGGK	2	IQSILSSGGK2	9628.39	13768.1	13838.9
D3ZMI6	D3ZMI6	D3ZMI6_RAT	Olfm4	Olfactomedin 4	1	IQSINYHPYDHK	IQSINYHPYDHK	2	IQSINYHPYDHK2	11792.7	5416.89	12781.1
D3ZMI6	D3ZMI6	D3ZMI6_RAT	Olfm4	Olfactomedin 4	1	IQSINYHPYDHK	IQSINYHPYDHK	3	IQSINYHPYDHK3	149506	143411	102146
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	IQSIVFDTAYNTNENMLICAPTGAGK	IQSIVFDTAYNTNENMLIC(UniMod:4)APTGAGK	3	IQSIVFDTAYNTNENMLIC(UniMod:4)APTGAGK3	3639.6	7112.15	4598.32
Q99P99	E5RQ38;Q99P99;A0A8I6G4R8	HDAC4_RAT	Hdac4	Histone deacetylase 4	0	IQSIWSR	IQSIWSR	2	IQSIWSR2	33164.1	32965.1	31451.8
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	IQSLEDESK	IQSLEDESK	2	IQSLEDESK2	4945.96	4571.46	7192.64
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	IQSLELDK	IQSLELDK	2	IQSLELDK2	98685.5	149534	134344
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	IQSLEVTVEK	IQSLEVTVEK	2	IQSLEVTVEK2	29106.3	26469.2	24654.6
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	IQSLLDIQEK	IQSLLDIQEK	2	IQSLLDIQEK2	1798.75		
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	IQSLLDIQEKEFEK	IQSLLDIQEKEFEK	3	IQSLLDIQEKEFEK3	1718.63	3902.3	
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	IQSSHSFQLENVNK	IQSSHSFQLENVNK	2	IQSSHSFQLENVNK2	6137.35	5514.08	3899.26
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	IQSSHSFQLENVNK	IQSSHSFQLENVNK	3	IQSSHSFQLENVNK3	55245.5	49568.1	47438
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	IQSSNSFDNVSPVVSYK	IQSSNSFDNVSPVVSYK	2	IQSSNSFDNVSPVVSYK2	100696	85623.7	99755
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	IQSSSMDAK	IQSSSMDAK	2	IQSSSMDAK2	27155.6	28257.2	42143.5
Q5M7T2	Q5M7T2	SPRY7_RAT	Spryd7	SPRY domain-containing protein 7	1	IQSTGIWGIGVATQK	IQSTGIWGIGVATQK	2	IQSTGIWGIGVATQK2	18207.8	14887.6	23500.1
B0BN20	B0BN20	B0BN20_RAT	Tspan6	Tetraspanin	1	IQSTLHCCGVTNYR	IQSTLHC(UniMod:4)C(UniMod:4)GVTNYR	3	IQSTLHC(UniMod:4)C(UniMod:4)GVTNYR3	10765.1	14194.3	11250
Q6NYB7	A0A8I6A3I5;A0A8I6A1H5;A0A8I6A3Z4;Q6NYB7;A0A8I6AT03	RAB1A_RAT	Rab1A	Ras-related protein Rab-1A	0	IQSTPVK	IQSTPVK	1	IQSTPVK1	9438.88	7749.54	11489.4
Q6NYB7	A0A8I6A3I5;A0A8I6A1H5;A0A8I6A3Z4;Q6NYB7;A0A8I6AT03	RAB1A_RAT	Rab1A	Ras-related protein Rab-1A	0	IQSTPVK	IQSTPVK	2	IQSTPVK2	1.62501e+06	1.69288e+06	1.72927e+06
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	IQSTVTQPGGK	IQSTVTQPGGK	2	IQSTVTQPGGK2	56971.3	42928.1	53237.2
A0A8I6AGS4	A0A8I6AGS4	A0A8I6AGS4_RAT	Abi3bp	ABI family member 3 binding protein	1	IQSTYDQVHSVPAYVPR	IQSTYDQVHSVPAYVPR	3	IQSTYDQVHSVPAYVPR3	16450	16260.4	17526.9
A0A8J8YPH6	A0A8J8YPH6	A0A8J8YPH6_RAT	Hps4	HPS4, biogenesis of lysosomal organelles complex 3 subunit 2	1	IQSVLSANLPLVAAPQNR	IQSVLSANLPLVAAPQNR	2	IQSVLSANLPLVAAPQNR2	15283.5	13926	10400.7
A0A8J8YPH6	A0A8J8YPH6	A0A8J8YPH6_RAT	Hps4	HPS4, biogenesis of lysosomal organelles complex 3 subunit 2	1	IQSVLSANLPLVAAPQNR	IQSVLSANLPLVAAPQNR	3	IQSVLSANLPLVAAPQNR3	27046.4	29141.3	33005.3
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	IQSYCSYTGR	IQSYC(UniMod:4)SYTGR	2	IQSYC(UniMod:4)SYTGR2	45396.4	56569.9	49147.7
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	IQTAHPAGR	IQTAHPAGR	2	IQTAHPAGR2			5337.36
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	IQTGLKK	IQTGLKK	2	IQTGLKK2	10821.2	7035.99	9289.18
D3ZA88	D3ZA88	D3ZA88_RAT	Trim34	Tripartite motif-containing 34	1	IQTGYNQLR	IQTGYNQLR	2	IQTGYNQLR2	5847.45	4601.24	4704.84
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	IQTITER	IQTITER	2	IQTITER2	38678.1	34523	34755.2
B4F7A3	B4F7A3	B4F7A3_RAT	Lgalsl	Galectin-like	1	IQTLSAIDTIK	IQTLSAIDTIK	2	IQTLSAIDTIK2	156720	159457	147289
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	IQTLTSDHK	IQTLTSDHK	2	IQTLTSDHK2	7426.97	4090.42	4461.89
A0A8I6A5H5	A0A8I6A5H5	A0A8I6A5H5_RAT	Rela	RELA proto-oncogene, NF-kB subunit	1	IQTNNNPFQVPIEEQR	IQTNNNPFQVPIEEQR	2	IQTNNNPFQVPIEEQR2	16970	13351.6	16566.8
A0A8I6A5H5	A0A8I6A5H5	A0A8I6A5H5_RAT	Rela	RELA proto-oncogene, NF-kB subunit	1	IQTNNNPFQVPIEEQR	IQTNNNPFQVPIEEQR	3	IQTNNNPFQVPIEEQR3	25625.7	29125.6	24411.4
P16036	P16036	S25A3_RAT	Slc25a3	Solute carrier family 25 member 3	1	IQTQPGYANTLR	IQTQPGYANTLR	2	IQTQPGYANTLR2	1.70957e+06	1.80678e+06	1.88213e+06
P16036	P16036	S25A3_RAT	Slc25a3	Solute carrier family 25 member 3	1	IQTQPGYANTLR	IQTQPGYANTLR	3	IQTQPGYANTLR3	15985.1	25168	20875.2
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	IQTSITFLCGK	IQTSITFLC(UniMod:4)GK	2	IQTSITFLC(UniMod:4)GK2	19581.6	19313.1	18629
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	IQTTAPPVK	IQTTAPPVK	2	IQTTAPPVK2	47822.9	45239.5	53955.3
Q4KM73	Q4KM73	KCY_RAT	Cmpk1	UMP-CMP kinase	1	IQTYLESTKPIIDLYEEMGK	IQTYLESTKPIIDLYEEMGK	3	IQTYLESTKPIIDLYEEMGK3	24536.7	24300.3	26103
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	IQVAPQLDNPDAPQQISVSNSEAR	IQVAPQLDNPDAPQQISVSNSEAR	3	IQVAPQLDNPDAPQQISVSNSEAR3	13461.5	12611.2	13039.9
A0A8I6GFC7	A0A8I6GFC7	A0A8I6GFC7_RAT	Ubp1	Upstream binding protein 1	1	IQVDTFK	IQVDTFK	2	IQVDTFK2	27277.3		21113.6
Q62632	Q62632	FSTL1_RAT	Fstl1	Follistatin-related protein 1	1	IQVDYDGHCK	IQVDYDGHC(UniMod:4)K	2	IQVDYDGHC(UniMod:4)K2	16257	14000	18052.7
Q62632	Q62632	FSTL1_RAT	Fstl1	Follistatin-related protein 1	1	IQVDYDGHCK	IQVDYDGHC(UniMod:4)K	3	IQVDYDGHC(UniMod:4)K3	33826.1	24853.3	16536.8
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	IQVEHGVTGSFK	IQVEHGVTGSFK	3	IQVEHGVTGSFK3	10909.1	6196.34	5649.8
Q3T1K5	B2GUZ5;Q3T1K5	CAZA2_RAT	Capza2	F-actin-capping protein subunit alpha-2	0	IQVHYYEDGNVQLVSHK	IQVHYYEDGNVQLVSHK	3	IQVHYYEDGNVQLVSHK3	16204.4	22551.2	12556.4
Q3T1K5	B2GUZ5;Q3T1K5	CAZA2_RAT	Capza2	F-actin-capping protein subunit alpha-2	0	IQVHYYEDGNVQLVSHK	IQVHYYEDGNVQLVSHK	4	IQVHYYEDGNVQLVSHK4	51782.3	50641.5	83531.2
P09330	P09330;A0A0G2JSV3;M0RBK1;P60892	PRPS2_RAT	Prps2	Ribose-phosphate pyrophosphokinase 2	0	IQVIDISMILAEAIR	IQVIDISMILAEAIR	2	IQVIDISMILAEAIR2		9140.73	
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	IQVLPYK	IQVLPYK	2	IQVLPYK2	107272	91678.9	96570.3
P14270	P14270	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	1	IQVLQNMVHCADLSNPTKPLQLYR	IQVLQNMVHC(UniMod:4)ADLSNPTKPLQLYR	3	IQVLQNMVHC(UniMod:4)ADLSNPTKPLQLYR3	6801.21	9391.31	4612.06
P14270	P14270	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	1	IQVLQNMVHCADLSNPTKPLQLYR	IQVLQNMVHC(UniMod:4)ADLSNPTKPLQLYR	4	IQVLQNMVHC(UniMod:4)ADLSNPTKPLQLYR4	12592.1	10881.7	22186.2
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	IQVLQQQADDAEER	IQVLQQQADDAEER	2	IQVLQQQADDAEER2	2.83411e+06	2.71e+06	3.56546e+06
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	IQVLQQQADDAEER	IQVLQQQADDAEER	3	IQVLQQQADDAEER3	179443	216756	205155
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	IQVLQQQADDAEERAER	IQVLQQQADDAEERAER	3	IQVLQQQADDAEERAER3	4.3579e+06	5.30753e+06	5.49064e+06
P08699	P08699	LEG3_RAT	Lgals3	Galectin-3	1	IQVLVEADHFK	IQVLVEADHFK	3	IQVLVEADHFK3	8823.01	4739.27	6324.58
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	IQVPNCDEIFYAGTGNLLLR	IQVPNC(UniMod:4)DEIFYAGTGNLLLR	3	IQVPNC(UniMod:4)DEIFYAGTGNLLLR3	80407.1	68031.5	62241
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	IQVSEESYR	IQVSEESYR	2	IQVSEESYR2	44733.3	38623.1	34957.5
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	IQVSELCK	IQVSELC(UniMod:4)K	2	IQVSELC(UniMod:4)K2	26943.6	21218.2	23939.9
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	IQVSNTQINVTDDSPR	IQVSNTQINVTDDSPR	2	IQVSNTQINVTDDSPR2	12285.7	18084.9	18431.8
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	IQVTEEK	IQVTEEK	2	IQVTEEK2	83347.2	80277.9	77829.8
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	IQVTTDLYQVLAAK	IQVTTDLYQVLAAK	2	IQVTTDLYQVLAAK2	73890.5	68105.4	66568.1
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	IQVTTDLYQVLAAK	IQVTTDLYQVLAAK	3	IQVTTDLYQVLAAK3	21011.6	15780.6	
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	IQVVVLSASGASSVPVR	IQVVVLSASGASSVPVR	2	IQVVVLSASGASSVPVR2	23773.5	20028.4	14933.6
P31977	P31977	EZRI_RAT	Ezr	Ezrin	1	IQVWHAEHR	IQVWHAEHR	3	IQVWHAEHR3	6904.06		6323.07
O35763	O35763	MOES_RAT	Msn	Moesin	1	IQVWHEEHR	IQVWHEEHR	2	IQVWHEEHR2	10925.5	15864.8	9620.97
O35763	O35763	MOES_RAT	Msn	Moesin	1	IQVWHEEHR	IQVWHEEHR	3	IQVWHEEHR3	165961	146874	169007
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	IQYDPIKEEK	IQYDPIKEEK	2	IQYDPIKEEK2	9461.53	7610.14	6593.78
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	IQYDPIKEEK	IQYDPIKEEK	3	IQYDPIKEEK3	117962	135516	125172
Q66HG5	Q66HG5	TM9S2_RAT	Tm9sf2	Transmembrane 9 superfamily member 2	1	IQYHVVETGSMGAR	IQYHVVETGSMGAR	2	IQYHVVETGSMGAR2	3246.67	5346.32	
Q66HG5	Q66HG5	TM9S2_RAT	Tm9sf2	Transmembrane 9 superfamily member 2	1	IQYHVVETGSMGAR	IQYHVVETGSMGAR	3	IQYHVVETGSMGAR3	27921	32911.2	33891.8
B2RZ27	B2RZ27	SH3L3_RAT	Sh3bgrl3	SH3 domain-binding glutamic acid-rich-like protein 3	1	IQYQLVDISQDNALR	IQYQLVDISQDNALR	2	IQYQLVDISQDNALR2	6085.1	5146.68	5566.49
B2RZ27	B2RZ27	SH3L3_RAT	Sh3bgrl3	SH3 domain-binding glutamic acid-rich-like protein 3	1	IQYQLVDISQDNALR	IQYQLVDISQDNALR	3	IQYQLVDISQDNALR3	8282.02	9599.95	
B2RZ27	B2RZ27	SH3L3_RAT	Sh3bgrl3	SH3 domain-binding glutamic acid-rich-like protein 3	1	IQYQLVDISQDNALRDEMR	IQYQLVDISQDNALRDEMR	3	IQYQLVDISQDNALRDEMR3	122606	105493	107618
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	IQYYCHDPYYK	IQYYC(UniMod:4)HDPYYK	2	IQYYC(UniMod:4)HDPYYK2	63654.2	57255.8	34994.6
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	IQYYCHDPYYK	IQYYC(UniMod:4)HDPYYK	3	IQYYC(UniMod:4)HDPYYK3	1.19106e+06	1.05834e+06	1.05215e+06
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	IRADIEVACYGYEGIDAVK	IRADIEVAC(UniMod:4)YGYEGIDAVK	3	IRADIEVAC(UniMod:4)YGYEGIDAVK3	2910.95	4222.8	6808.79
P04905	P04905	GSTM1_RAT	Gstm1	Glutathione S-transferase Mu 1	1	IRADIVENQVMDNR	IRADIVENQVMDNR	3	IRADIVENQVMDNR3		3123.92	4781.53
Q66H59	Q66H59	NPL_RAT	Npl	N-acetylneuraminate lyase	1	IRAEELLDGIQDK	IRAEELLDGIQDK	3	IRAEELLDGIQDK3	54092.4	42568.4	57278.7
Q66H59	Q66H59	NPL_RAT	Npl	N-acetylneuraminate lyase	1	IRAEELLDGIQDKIPSFQGLK	IRAEELLDGIQDKIPSFQGLK	4	IRAEELLDGIQDKIPSFQGLK4	17861.8	22501.4	16852.8
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	IRCEEEDVEMSEDAYTVLTR	IRC(UniMod:4)EEEDVEMSEDAYTVLTR	3	IRC(UniMod:4)EEEDVEMSEDAYTVLTR3	13738.8	15547.5	10791.7
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	IRDALCLINSIPLPQK	IRDALC(UniMod:4)LINSIPLPQK	3	IRDALC(UniMod:4)LINSIPLPQK3	22690.8	38400	32368.3
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	IRDDCSQHLQK	IRDDC(UniMod:4)SQHLQK	2	IRDDC(UniMod:4)SQHLQK2			3539.84
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	IRDDCSQHLQK	IRDDC(UniMod:4)SQHLQK	3	IRDDC(UniMod:4)SQHLQK3			1826.57
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	IRDDGVVQEEQSRPEDAPSDLSAPHSSAR	IRDDGVVQEEQSRPEDAPSDLSAPHSSAR	4	IRDDGVVQEEQSRPEDAPSDLSAPHSSAR4	18108.3	18734.9	25626.5
B1WBU6	B1WBU6;A0A8I5ZYI4	B1WBU6_RAT	Smox	Spermine oxidase	0	IRDDPDDTEATKR	IRDDPDDTEATKR	3	IRDDPDDTEATKR3			1653.16
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	IRDEMVATEQER	IRDEMVATEQER	2	IRDEMVATEQER2	4045.67	3175.62	3387.53
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	IRDEMVATEQER	IRDEMVATEQER	3	IRDEMVATEQER3	391919	310766	341168
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	IRDEMVATEQERTPLQQK	IRDEMVATEQERTPLQQK	4	IRDEMVATEQERTPLQQK4		11241.9	
Q3MIF4	Q3MIF4	XYLB_RAT	Xylb	Xylulose kinase	1	IRDESASCSWNK	IRDESASC(UniMod:4)SWNK	3	IRDESASC(UniMod:4)SWNK3	8256.91	5641.95	
F1LRE5	F1LRE5	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	1	IRDIDAATEAK	IRDIDAATEAK	2	IRDIDAATEAK2	2725.37	1831.21	4318.74
F1LRE5	F1LRE5	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	1	IRDIDAATEAK	IRDIDAATEAK	3	IRDIDAATEAK3	35711.5	45769.3	36988.6
Q63768	Q63768	CRK_RAT	Crk	Adapter molecule crk	1	IRDKPEEQWWNAEDSEGK	IRDKPEEQWWNAEDSEGK	3	IRDKPEEQWWNAEDSEGK3	2050.13	3304.4	2636.13
Q63768	Q63768	CRK_RAT	Crk	Adapter molecule crk	1	IRDKPEEQWWNAEDSEGK	IRDKPEEQWWNAEDSEGK	4	IRDKPEEQWWNAEDSEGK4	5220.7	6178.02	7295.32
A0A8I5ZVX1	A0A8I5ZVX1	A0A8I5ZVX1_RAT	Ppfibp2	PPFIA binding protein 2	1	IRDLEVCLEGHQVK	IRDLEVC(UniMod:4)LEGHQVK	4	IRDLEVC(UniMod:4)LEGHQVK4	2943.14		3042.81
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	IRDLLPVMCDR	IRDLLPVMC(UniMod:4)DR	3	IRDLLPVMC(UniMod:4)DR3	50198.6	53619.8	62216.9
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	IRDNLGISADNLTSPSPPVLIPPLR	IRDNLGISADNLTSPSPPVLIPPLR	3	IRDNLGISADNLTSPSPPVLIPPLR3	3393.58	4381.24	
M0RD03	M0RD03;A0A8I6AMY8	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	0	IRDPNQGGK	IRDPNQGGK	2	IRDPNQGGK2			7927.66
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	IRDPNQGGKDITEEIMSGAR	IRDPNQGGKDITEEIMSGAR	4	IRDPNQGGKDITEEIMSGAR4	5695.28	8942.7	4278.57
Q3MIE7	Q3MIE7	Q3MIE7_RAT	Commd9	COMM domain containing 9	1	IRDQLSAVANK	IRDQLSAVANK	3	IRDQLSAVANK3	6494.53	10660.4	11247.2
A0A0G2JZC4	A0A0G2JZC4	A0A0G2JZC4_RAT	Sema6d	Semaphorin 6D	1	IRDTLYIAGR	IRDTLYIAGR	3	IRDTLYIAGR3	9555.36	7237.47	6826.23
A0A0G2K516	A0A0G2K516	A0A0G2K516_RAT	Stx11	Syntaxin 11	1	IRDVHELFLQMAVLVEK	IRDVHELFLQMAVLVEK	3	IRDVHELFLQMAVLVEK3	121062	123428	102395
A0A0G2K516	A0A0G2K516	A0A0G2K516_RAT	Stx11	Syntaxin 11	1	IRDVHELFLQMAVLVEK	IRDVHELFLQMAVLVEK	4	IRDVHELFLQMAVLVEK4	194440	230513	210984
Q6IFV1	Q6IFV1	K1C14_RAT	Krt14	Keratin, type I cytoskeletal 14	1	IRDWYQR	IRDWYQR	2	IRDWYQR2	12297.1	9883.29	6349.08
E9PU10	E9PU10	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	1	IRDYCLSNLTDIGVSEPR	IRDYC(UniMod:4)LSNLTDIGVSEPR	3	IRDYC(UniMod:4)LSNLTDIGVSEPR3	45143.4	40609.7	41276.7
A0A0G2JZP9	A0A8I6AJA6;A0A0G2JZP9	A0A0G2JZP9_RAT	Rnf11	Ring finger protein 11-like 1	0	IRECVICMMDFVYGDPIR	IREC(UniMod:4)VIC(UniMod:4)MMDFVYGDPIR	3	IREC(UniMod:4)VIC(UniMod:4)MMDFVYGDPIR3	6318.86		6264.65
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	IREDLPNLESSEETEQINK	IREDLPNLESSEETEQINK	3	IREDLPNLESSEETEQINK3	73014.6	76743.6	66711.1
Q9JJM9	Q9JJM9	SEPT5_RAT	Septin5	Septin-5	1	IREEIDK	IREEIDK	2	IREEIDK2	25293.2	27199.9	
A0A8I5XWT0	A0A8I5XWT0	A0A8I5XWT0_RAT	Cd55	CD55 molecule (Cromer blood group)	1	IREESDSYAYR	IREESDSYAYR	2	IREESDSYAYR2	45519.1	47372.7	59098.8
A0A8I5XWT0	A0A8I5XWT0	A0A8I5XWT0_RAT	Cd55	CD55 molecule (Cromer blood group)	1	IREESDSYAYR	IREESDSYAYR	3	IREESDSYAYR3	1.01534e+06	1.25996e+06	1.31785e+06
P85108	P69897;M0R8B6;Q6P9T8;P85108;Q4QQV0;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	IREEYPDR	IREEYPDR	2	IREEYPDR2	752572	643183	605463
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	IREEYPDRILNSFSVMPSPK	IREEYPDRILNSFSVMPSPK	4	IREEYPDRILNSFSVMPSPK4	14279.6	27568	31701.8
P85108	P85108;Q4QQV0;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	IREEYPDRIMNTFSVMPSPK	IREEYPDRIMNTFSVMPSPK	4	IREEYPDRIMNTFSVMPSPK4	16616.1	20445.5	17380.2
Q6P9T8	P69897;Q6P9T8	TBB4B_RAT	Tubb4b	Tubulin beta-4B chain	0	IREEYPDRIMNTFSVVPSPK	IREEYPDRIMNTFSVVPSPK	4	IREEYPDRIMNTFSVVPSPK4	14881.7	14919.1	24534.9
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	IREFIQDFQK	IREFIQDFQK	3	IREFIQDFQK3	10197.2	11692.7	24185
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	IREGESSAENETK	IREGESSAENETK	2	IREGESSAENETK2			75024.8
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	IREGESSAENETK	IREGESSAENETK	3	IREGESSAENETK3			4374.96
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	IREGEVEVLK	IREGEVEVLK	3	IREGEVEVLK3	104867	147828	134902
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	IREGWQVEEADDWLR	IREGWQVEEADDWLR	3	IREGWQVEEADDWLR3	39786.9	38295.9	38750.3
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	IREGYLVK	IREGYLVK	2	IREGYLVK2	35700.1	26727.8	18324.1
P63029	P63029;A0A8I6GKA0;A0A8I6AN27	TCTP_RAT	Tpt1	Translationally-controlled tumor protein	0	IREIADGLCLEVEGK	IREIADGLC(UniMod:4)LEVEGK	3	IREIADGLC(UniMod:4)LEVEGK3	34478.1	42612.7	35682.9
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	IREIQPGAFR	IREIQPGAFR	3	IREIQPGAFR3	7700.89	5991.78	12228.9
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	IRELETQISELQEDLESER	IRELETQISELQEDLESER	3	IRELETQISELQEDLESER3	733639	787387	826443
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	IRELETQISELQEDLESER	IRELETQISELQEDLESER	4	IRELETQISELQEDLESER4	4677.41	3393.04	5136.97
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	IRELETSLEK	IRELETSLEK	3	IRELETSLEK3	7686.15	4415.58	8121.13
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	IRENDACLVEVNLNNIK	IRENDAC(UniMod:4)LVEVNLNNIK	3	IRENDAC(UniMod:4)LVEVNLNNIK3	116282	112000	121401
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	IRENMASLQSNPQQQELFR	IRENMASLQSNPQQQELFR	3	IRENMASLQSNPQQQELFR3	22083.7	33626.6	25320.3
D3ZJR7	D3ZJR7	D3ZJR7_RAT	Dsc2	Desmocollin 2	1	IRENVPIGTR	IRENVPIGTR	3	IRENVPIGTR3	291545	320113	292661
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	IREPLTAQQLETTTER	IREPLTAQQLETTTER	3	IREPLTAQQLETTTER3	74717.1	73272.8	73832.7
P36372	P36372	TAP2_RAT	Tap2	Antigen peptide transporter 2	1	IREQLFSSLLR	IREQLFSSLLR	3	IREQLFSSLLR3	32333.4	29438	30666.4
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	IREQNLQDIK	IREQNLQDIK	2	IREQNLQDIK2	28233.1	25337.9	31214.5
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	IREQNLQDIK	IREQNLQDIK	3	IREQNLQDIK3	136316	172976	163845
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	IRETGERPSNEEIMR	IRETGERPSNEEIMR	4	IRETGERPSNEEIMR4	22386.7	44769.9	33139.8
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	IREVLGFGGPDTR	IREVLGFGGPDTR	3	IREVLGFGGPDTR3	18861.2	34926.9	18551
Q9Z2F5	Q9Z2F5	CTBP1_RAT	Ctbp1	C-terminal-binding protein 1	1	IRGETLGIIGLGR	IRGETLGIIGLGR	3	IRGETLGIIGLGR3	18223.4	19155.1	23769.3
D3ZW38	D3ZW38	D3ZW38_RAT	Exosc6	Exosome component 6	1	IRGPEESQPPQLYAAEEDETPAAR	IRGPEESQPPQLYAAEEDETPAAR	3	IRGPEESQPPQLYAAEEDETPAAR3	5812.49	2616.7	7291.04
D3ZW38	D3ZW38	D3ZW38_RAT	Exosc6	Exosome component 6	1	IRGPEESQPPQLYAAEEDETPAARDPTR	IRGPEESQPPQLYAAEEDETPAARDPTR	4	IRGPEESQPPQLYAAEEDETPAARDPTR4	2808.58		3178.38
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	IRIDSLSAQLSQLQK	IRIDSLSAQLSQLQK	3	IRIDSLSAQLSQLQK3	4000.97	13133.2	9169.86
P18292	P18292	THRB_RAT	F2	Prothrombin	1	IRITDNMFCAGFK	IRITDNMFC(UniMod:4)AGFK	2	IRITDNMFC(UniMod:4)AGFK2	4573.45	2776.38	5423.07
P18292	P18292	THRB_RAT	F2	Prothrombin	1	IRITDNMFCAGFK	IRITDNMFC(UniMod:4)AGFK	3	IRITDNMFC(UniMod:4)AGFK3	184604	222377	216541
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	IRKPLDFETEPVTSIVFK	IRKPLDFETEPVTSIVFK	3	IRKPLDFETEPVTSIVFK3	34172.1	44067	49740.2
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	IRKPLDFETEPVTSIVFK	IRKPLDFETEPVTSIVFK	4	IRKPLDFETEPVTSIVFK4	61223.7	85354.3	75700.4
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	IRLCNSPSPQMNGKPCEGEAR	IRLC(UniMod:4)NSPSPQMNGKPC(UniMod:4)EGEAR	4	IRLC(UniMod:4)NSPSPQMNGKPC(UniMod:4)EGEAR4	22910.2	30101.4	22733.6
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	IRLEETLEQLAK	IRLEETLEQLAK	2	IRLEETLEQLAK2	5023.14	6003.66	5608.05
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	IRLEETLEQLAK	IRLEETLEQLAK	3	IRLEETLEQLAK3	49178.2	63397.3	58224.3
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	IRLEEVDDADDYDSR	IRLEEVDDADDYDSR	2	IRLEEVDDADDYDSR2	1531.14		
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	IRLEEVDDADDYDSR	IRLEEVDDADDYDSR	3	IRLEEVDDADDYDSR3	45240.5	53031.7	52681.7
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	IRLPPGEYIVVPSTFEPNKEGDFLLR	IRLPPGEYIVVPSTFEPNKEGDFLLR	4	IRLPPGEYIVVPSTFEPNKEGDFLLR4	20251.1	35802.7	17472
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	IRLQLLLLHTR	IRLQLLLLHTR	3	IRLQLLLLHTR3	2065.71	2751.85	3056.73
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	IRLVDIKGDPIPNEQVFIK	IRLVDIKGDPIPNEQVFIK	4	IRLVDIKGDPIPNEQVFIK4	6407.75	3736.07	8642.62
F7FJT3	F7FJT3	F7FJT3_RAT	Rad23a	UV excision repair protein RAD23	1	IRMEPDETVK	IRMEPDETVK	3	IRMEPDETVK3	21147.5	22493.7	18496.3
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	IRNEDLIFNESLGQGTFTK	IRNEDLIFNESLGQGTFTK	3	IRNEDLIFNESLGQGTFTK3	42824.1	52803.4	42220.9
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	IRNTEVGNEVPGQK	IRNTEVGNEVPGQK	2	IRNTEVGNEVPGQK2	7447.79	12487.9	11237.9
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	IRNTEVGNEVPGQK	IRNTEVGNEVPGQK	3	IRNTEVGNEVPGQK3	53105.8	82423.9	89994.7
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	IRNYLTIFR	IRNYLTIFR	3	IRNYLTIFR3	25972.4	33753.3	36517.7
P67999	P67999	KS6B1_RAT	Rps6kb1	Ribosomal protein S6 kinase beta-1	1	IRPECFELLR	IRPEC(UniMod:4)FELLR	3	IRPEC(UniMod:4)FELLR3	8468.86	11473.5	8833.5
Q9JMB3	Q9JMB3	Q9JMB3_RAT	Epb41l3	Erythrocyte membrane protein band 4.1-like 3	1	IRPGEFEQFESTIGFK	IRPGEFEQFESTIGFK	3	IRPGEFEQFESTIGFK3	6151.96	7121.82	
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	IRPGEQEHYESTIGFK	IRPGEQEHYESTIGFK	3	IRPGEQEHYESTIGFK3	18123.7	24811.3	14282.8
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	IRPGEQEHYESTIGFK	IRPGEQEHYESTIGFK	4	IRPGEQEHYESTIGFK4	75966.7	134131	118473
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	IRPLNSDGSLNLLGCEPPR	IRPLNSDGSLNLLGC(UniMod:4)EPPR	3	IRPLNSDGSLNLLGC(UniMod:4)EPPR3	111442	110525	120183
P35446	P35446	SPON1_RAT	Spon1	Spondin-1	1	IRPLTSLDHPQSPFYDPEGGSITQVAR	IRPLTSLDHPQSPFYDPEGGSITQVAR	4	IRPLTSLDHPQSPFYDPEGGSITQVAR4	15659.4	14540.7	16476.5
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	IRPLVGQ	IRPLVGQ	2	IRPLVGQ2	1.24555e+07	1.2364e+07	1.4135e+07
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	IRPQTWHLGIALR	IRPQTWHLGIALR	3	IRPQTWHLGIALR3	5852.63	5032.78	6086.51
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	IRPQTWHLGIALR	IRPQTWHLGIALR	4	IRPQTWHLGIALR4	23310	11632.5	10007
D3ZA85	D3ZA85	D3ZA85_RAT	Nfu1	NFU1 iron-sulfur cluster scaffold homolog, mitochondrial	1	IRPTVQEDGGDVIYR	IRPTVQEDGGDVIYR	3	IRPTVQEDGGDVIYR3	14173.4	19726.8	16346.1
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	IRPVFPQQ	IRPVFPQQ	2	IRPVFPQQ2	4.2321e+07	3.56822e+07	3.77634e+07
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	IRQDADSVITVR	IRQDADSVITVR	2	IRQDADSVITVR2	16448.1	20711.4	14592.3
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	IRQDADSVITVR	IRQDADSVITVR	3	IRQDADSVITVR3	64657.4	74421.3	74344.8
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	IRQDLVFQYVEDPTIVR	IRQDLVFQYVEDPTIVR	3	IRQDLVFQYVEDPTIVR3	49966.4	51304.9	61618.2
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	IRQEEIEIEVVQR	IRQEEIEIEVVQR	3	IRQEEIEIEVVQR3	11858.3	12254.1	7462.56
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	IRQEIQELK	IRQEIQELK	3	IRQEIQELK3	18159.7	15188.3	14874
P15384	P15384	KCNA3_RAT	Kcna3	Potassium voltage-gated channel subfamily A member 3	1	IRRPVNVPIDIFSEEIR	IRRPVNVPIDIFSEEIR	4	IRRPVNVPIDIFSEEIR4	41193.2	50649.3	45360.6
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	IRSELEK	IRSELEK	2	IRSELEK2	8503.1	12364	12286.6
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	IRSPSDDGSGGVRDDGQLSPGVLVR	IRSPSDDGSGGVRDDGQLSPGVLVR	4	IRSPSDDGSGGVRDDGQLSPGVLVR4	4693.88	9340.8	11811.2
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	IRTDAGFTLR	IRTDAGFTLR	3	IRTDAGFTLR3	68010.1	66381.6	52629.8
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	IRTEHLTEEEKK	IRTEHLTEEEKK	3	IRTEHLTEEEKK3			4360.47
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	IRVEPGLFEWTK	IRVEPGLFEWTK	2	IRVEPGLFEWTK2	5491.34	6744.5	4647.58
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	IRVEPGLFEWTK	IRVEPGLFEWTK	3	IRVEPGLFEWTK3	92921	109668	93091.7
E9PSP1	E9PSP1	E9PSP1_RAT	Pltp	Phospholipid transfer protein	1	IRVTSAALELVK	IRVTSAALELVK	3	IRVTSAALELVK3	12831.5	7131.56	11243.4
P34058	P82995;P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	IRYESLTDPSK	IRYESLTDPSK	2	IRYESLTDPSK2	454972	383788	336437
P34058	P82995;P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	IRYESLTDPSK	IRYESLTDPSK	3	IRYESLTDPSK3	1.51533e+06	1.74269e+06	1.73927e+06
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	IRYPHVYDSQAAAR	IRYPHVYDSQAAAR	4	IRYPHVYDSQAAAR4	12289.4	8208.52	8508.49
P01026	P01026	CO3_RAT	C3	Complement C3	1	IRYYTYLVMNK	IRYYTYLVMNK	3	IRYYTYLVMNK3	12762.4	14856.9	16602.5
F1M7L9	F1M7L9	PKP2_RAT	Pkp2	Plakophilin-2	1	ISAAATFIQHESFQK	ISAAATFIQHESFQK	3	ISAAATFIQHESFQK3	2799.19	9372.76	6824.05
G3V6W5	G3V6W5	G3V6W5_RAT	Ifih1	RNA helicase	1	ISAAGNSGNESGVR	ISAAGNSGNESGVR	2	ISAAGNSGNESGVR2	10394.9	6252.06	8716.25
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	ISAAMYK	ISAAMYK	2	ISAAMYK2	64013.4	71300.2	61858.2
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	ISAAPVSSR	ISAAPVSSR	2	ISAAPVSSR2	18032.8	11326	19505.8
A0A0G2JYN4	A0A0G2JYN4	A0A0G2JYN4_RAT	Ergic2	Endoplasmic reticulum-Golgi intermediate compartment protein	1	ISADTHQFSVTER	ISADTHQFSVTER	3	ISADTHQFSVTER3	42261.4	28229	37649.7
Q63686	Q63686	CDK16_RAT	Cdk16	Cyclin-dependent kinase 16	1	ISAEDAMK	ISAEDAMK	2	ISAEDAMK2		14118.4	13472.9
A0A8I6AN62	A0A8I6AN62	A0A8I6AN62_RAT	Rhoc	Ras homolog family member C	1	ISAFGYLECSAK	ISAFGYLEC(UniMod:4)SAK	2	ISAFGYLEC(UniMod:4)SAK2	22456.3	15918.4	19907.2
A0A8I6ASC6	A0A8I6ASC6	A0A8I6ASC6_RAT	Igdcc4	Immunoglobulin superfamily, DCC subclass, member 4	1	ISAGTGAGYGVPSQWMQHR	ISAGTGAGYGVPSQWMQHR	3	ISAGTGAGYGVPSQWMQHR3	7873.53	6265.49	10942.9
D3Z9K9	D3Z9K9	D3Z9K9_RAT	Gdpd2	Glycerophosphodiester phosphodiesterase domain containing 2	1	ISAHSSDFSWAELQK	ISAHSSDFSWAELQK	2	ISAHSSDFSWAELQK2	14562.3	9472.72	10939.4
D3Z9K9	D3Z9K9	D3Z9K9_RAT	Gdpd2	Glycerophosphodiester phosphodiesterase domain containing 2	1	ISAHSSDFSWAELQK	ISAHSSDFSWAELQK	3	ISAHSSDFSWAELQK3	216257	251873	255029
F7EUU4	F7EUU4	F7EUU4_RAT	Cops5	COP9 signalosome subunit 5	1	ISALALLK	ISALALLK	2	ISALALLK2	145065	131320	141154
F1LPV0	F1LPV0	F1LPV0_RAT	Nars1	asparagine--tRNA ligase	1	ISALEGYR	ISALEGYR	2	ISALEGYR2	27123.4	13523.9	26131.4
A0A8I6G6W8	A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	ISALESQPAR	ISALESQPAR	2	ISALESQPAR2	16791.4	21906.5	20324.9
P13086	P13086	SUCA_RAT	Suclg1	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial	1	ISALQSAGVIVSMSPAQLGTCMYK	ISALQSAGVIVSMSPAQLGTC(UniMod:4)MYK	3	ISALQSAGVIVSMSPAQLGTC(UniMod:4)MYK3	56041.5	44094.4	47911.1
D3ZYT8	D3ZYT8	D3ZYT8_RAT	Pikfyve	1-phosphatidylinositol-3-phosphate 5-kinase	1	ISAMDTSPR	ISAMDTSPR	2	ISAMDTSPR2	13072.4	12332.9	17480.5
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	ISANYFIVEDSYLSK	ISANYFIVEDSYLSK	2	ISANYFIVEDSYLSK2	1219.05	4790.66	4024.86
P85515	P85515	ACTZ_RAT	Actr1a	Alpha-centractin	1	ISAPQER	ISAPQER	2	ISAPQER2	1.0755e+06	1.06701e+06	1.21237e+06
P97696	P97696	CYH3_RAT	Cyth3	Cytohesin-3	1	ISAPSPEEKEEWMK	ISAPSPEEKEEWMK	3	ISAPSPEEKEEWMK3	21519.8		24440.1
P97694	P97694	CYH1_RAT	Cyth1	Cytohesin-1	1	ISAPTPEEKEDWIK	ISAPTPEEKEDWIK	3	ISAPTPEEKEDWIK3	19486.2		21439.2
P63035	P63035	CYH2_RAT	Cyth2	Cytohesin-2	1	ISAPTQEEK	ISAPTQEEK	2	ISAPTQEEK2	8158.6	8947.23	8039.84
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	ISASEFDR	ISASEFDR	2	ISASEFDR2	277312	252455	244027
Q5FVL2	Q5FVL2	EMC8_RAT	Emc8	ER membrane protein complex subunit 8	1	ISASLLDSR	ISASLLDSR	2	ISASLLDSR2	147590	112873	125605
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	ISATLQDR	ISATLQDR	2	ISATLQDR2	27872	26675	40156.8
Q5U3Z7	A0A8I5ZKU9;Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	0	ISATSIFFESMPYK	ISATSIFFESMPYK	2	ISATSIFFESMPYK2		41173.1	34462.7
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	ISAVNVFPSNTSPFQR	ISAVNVFPSNTSPFQR	2	ISAVNVFPSNTSPFQR2	14093.2	9174.59	
D3ZHW0	D3ZHW0	D3ZHW0_RAT	Dhx29	ATP-dependent RNA helicase DHX29	1	ISAVSLATR	ISAVSLATR	2	ISAVSLATR2	4292.59	4014.86	7342.46
F1LZ11	F1LZ11	F1LZ11_RAT	AABR07065814.2	Ig-like domain-containing protein	1	ISCAASGFTFSNAAMYWVR	ISC(UniMod:4)AASGFTFSNAAMYWVR	3	ISC(UniMod:4)AASGFTFSNAAMYWVR3	7111.19	15222.3	19093
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	ISCENEQAR	ISC(UniMod:4)ENEQAR	2	ISC(UniMod:4)ENEQAR2	54486.5		79734.5
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	ISCFGSGSCPQFLAAATK	ISC(UniMod:4)FGSGSC(UniMod:4)PQFLAAATK	2	ISC(UniMod:4)FGSGSC(UniMod:4)PQFLAAATK2	8354.54	12395.8	9891.52
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	ISCFGSGSCPQFLAAATK	ISC(UniMod:4)FGSGSC(UniMod:4)PQFLAAATK	3	ISC(UniMod:4)FGSGSC(UniMod:4)PQFLAAATK3	5132.71	6722.48	1325.24
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	ISCGPPTHVENAIAR	ISC(UniMod:4)GPPTHVENAIAR	3	ISC(UniMod:4)GPPTHVENAIAR3	160534	150375	167600
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	ISCKVTSR	ISC(UniMod:4)KVTSR	2	ISC(UniMod:4)KVTSR2			29417.9
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	ISCLEAEK	ISC(UniMod:4)LEAEK	2	ISC(UniMod:4)LEAEK2	37002.9	48414.8	48573.4
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	ISCSSNQLPTVR	ISC(UniMod:4)SSNQLPTVR	2	ISC(UniMod:4)SSNQLPTVR2	8308.34	3853.49	7287.84
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	ISCTIANR	ISC(UniMod:4)TIANR	1	ISC(UniMod:4)TIANR1	19126.9	25700.2	22758.1
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	ISCTIANR	ISC(UniMod:4)TIANR	2	ISC(UniMod:4)TIANR2	28430.5	42166.9	28256.3
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	ISCTIANRCHEGGQSYK	ISC(UniMod:4)TIANRC(UniMod:4)HEGGQSYK	3	ISC(UniMod:4)TIANRC(UniMod:4)HEGGQSYK3	5741.39	4927.58	13641.5
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	ISCTIANRCHEGGQSYK	ISC(UniMod:4)TIANRC(UniMod:4)HEGGQSYK	4	ISC(UniMod:4)TIANRC(UniMod:4)HEGGQSYK4	17144.1	17693.6	36214.7
P08650	P08650	CO5_RAT	C5	Complement C5	1	ISCTNANLVK	ISC(UniMod:4)TNANLVK	2	ISC(UniMod:4)TNANLVK2	657048	539686	531068
M0R7E7	M0R7E7	M0R7E7_RAT	Map2k3	Mitogen activated protein kinase kinase 3	1	ISCVSKPPVSNPTPPR	ISC(UniMod:4)VSKPPVSNPTPPR	3	ISC(UniMod:4)VSKPPVSNPTPPR3	24274	16260.9	20075.5
Q642B0	Q642B0	Q642B0_RAT	Gpc4	Glypican 4	1	ISDAIMNMQDNSVQVSQK	ISDAIMNMQDNSVQVSQK	3	ISDAIMNMQDNSVQVSQK3	14361.5	14684.3	8732.89
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	ISDDCVAQWK	ISDDC(UniMod:4)VAQWK	2	ISDDC(UniMod:4)VAQWK2	15673.5	15401.3	16625.3
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	ISDDLMQK	ISDDLMQK	1	ISDDLMQK1	4009.21	3389.95	3350.03
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	ISDDLMQK	ISDDLMQK	2	ISDDLMQK2	326999	402849	329715
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	ISDEDWDIIQR	ISDEDWDIIQR	2	ISDEDWDIIQR2	81057.3	76470.8	78421.4
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	ISDEDWDIIQR	ISDEDWDIIQR	3	ISDEDWDIIQR3	6009.49	10199.1	8779.11
A0A8I6G1H3	A0A8I6G1H3	A0A8I6G1H3_RAT	Irak4	Interleukin-1 receptor-associated kinase 4	1	ISDFGLAR	ISDFGLAR	2	ISDFGLAR2	11072.3	10210.2	
Q64725	D3ZDY2;A0A0R4J8U1;Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	0	ISDFGLSK	ISDFGLSK	2	ISDFGLSK2	172863	160292	151427
Q501W1	Q501W1	Q501W1_RAT	Txk	Tyrosine-protein kinase	1	ISDFGMAR	ISDFGMAR	2	ISDFGMAR2	5588.59	4787.32	7079.86
P09760	P09760;D4A584	FER_RAT	Fer	Tyrosine-protein kinase Fer	0	ISDFGMSR	ISDFGMSR	2	ISDFGMSR2	15151.8	6384.94	22846.3
A0A8I6AEL0	F7FMK8;D3ZFL3;Q63796;A0A8I6AEL0;F1LUY7	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	0	ISDFGTSK	ISDFGTSK	2	ISDFGTSK2	100141	120423	121308
D3ZUP5	D3ZUP5	D3ZUP5_RAT	Brk1	BRICK1 subunit of SCAR/WAVE actin nucleating complex	1	ISDFLNSFDMSCR	ISDFLNSFDMSC(UniMod:4)R	2	ISDFLNSFDMSC(UniMod:4)R2	111429	107527	122412
D3ZUP5	D3ZUP5	D3ZUP5_RAT	Brk1	BRICK1 subunit of SCAR/WAVE actin nucleating complex	1	ISDFLNSFDMSCR	ISDFLNSFDMSC(UniMod:4)R	3	ISDFLNSFDMSC(UniMod:4)R3	8649.15	8782.64	6364.71
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	ISDFLQK	ISDFLQK	2	ISDFLQK2		82554.4	115634
Q9QYM0	Q9QYM0	MRP5_RAT	Abcc5	ATP-binding cassette sub-family C member 5	1	ISDIGLADLR	ISDIGLADLR	2	ISDIGLADLR2	4938.92		
B5DFI9	B5DFI9	B5DFI9_RAT	Pdk3	Protein-serine/threonine kinase	1	ISDLGGGVPLR	ISDLGGGVPLR	2	ISDLGGGVPLR2			3161.43
B5DFI9	B5DFI9	B5DFI9_RAT	Pdk3	Protein-serine/threonine kinase	1	ISDLGGGVPLRK	ISDLGGGVPLRK	3	ISDLGGGVPLRK3	16712.3	10089.9	13390.4
P26817	P26817;P26819	ARBK1_RAT	Grk2	Beta-adrenergic receptor kinase 1	0	ISDLGLACDFSK	ISDLGLAC(UniMod:4)DFSK	2	ISDLGLAC(UniMod:4)DFSK2	5648.02	5508.13	
Q62833	Q62833	GRK5_RAT	Grk5	G protein-coupled receptor kinase 5	1	ISDLGLAVK	ISDLGLAVK	2	ISDLGLAVK2	13404.2		17927.1
D4AE59	D4AE59	STK11_RAT	Stk11	Serine/threonine-protein kinase STK11	1	ISDLGVAEALHPFAVDDTCR	ISDLGVAEALHPFAVDDTC(UniMod:4)R	3	ISDLGVAEALHPFAVDDTC(UniMod:4)R3	33325.6	24991.3	16776.6
F1LW90	F1LW90	F1LW90_RAT	Fam184a	Family with sequence similarity 184, member A	1	ISDLQDELR	ISDLQDELR	2	ISDLQDELR2	11990	8531.25	
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	ISDNVLVDINNPEPLIQTAK	ISDNVLVDINNPEPLIQTAK	3	ISDNVLVDINNPEPLIQTAK3	124225	102445	93370.7
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	ISDPNLPPR	ISDPNLPPR	2	ISDPNLPPR2	59038.4	48184.1	48381.1
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	ISDSTHLDSPSQAQPK	ISDSTHLDSPSQAQPK	2	ISDSTHLDSPSQAQPK2	7773.02	6950.89	4430.72
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	ISDSTHLDSPSQAQPK	ISDSTHLDSPSQAQPK	3	ISDSTHLDSPSQAQPK3	275254	329454	225138
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	ISDTEKLPEFK	ISDTEKLPEFK	3	ISDTEKLPEFK3	25956.8	42862	41925.4
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	ISDVNCAVHLCSLFHQR	ISDVNC(UniMod:4)AVHLC(UniMod:4)SLFHQR	4	ISDVNC(UniMod:4)AVHLC(UniMod:4)SLFHQR4	13483.8	13704.3	12482.8
D4A249	D4A249	D4A249_RAT	Mblac2	Metallo-beta-lactamase domain containing 2	1	ISDYVGTCER	ISDYVGTC(UniMod:4)ER	2	ISDYVGTC(UniMod:4)ER2	3322.02	2504.44	
D3ZL50	D3ZL50	D3ZL50_RAT	Skic3	Tetratricopeptide repeat domain 37	1	ISEAESLCTK	ISEAESLC(UniMod:4)TK	2	ISEAESLC(UniMod:4)TK2	2218.42	2778.35	
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	ISEAIWLPEEHYSSSPEK	ISEAIWLPEEHYSSSPEK	3	ISEAIWLPEEHYSSSPEK3	12378.6	13592.6	17762.2
Q920F5	Q920F5	DCMC_RAT	Mlycd	Malonyl-CoA decarboxylase, mitochondrial	1	ISECEAVHPVK	ISEC(UniMod:4)EAVHPVK	3	ISEC(UniMod:4)EAVHPVK3	3562.95	3676.89	6291.69
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	ISEDESSGLVYK	ISEDESSGLVYK	2	ISEDESSGLVYK2	11064.9	13131.6	10377
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	ISEDKNPDYR	ISEDKNPDYR	2	ISEDKNPDYR2	3863.6	5124.16	7241.74
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	ISEDKNPDYR	ISEDKNPDYR	3	ISEDKNPDYR3	5518.83		7989.87
F1M4J1	F1M4J1	F1M4J1_RAT	LOC100294508	Dyslexia susceptibility 2-like	1	ISEDTAILK	ISEDTAILK	2	ISEDTAILK2	26854.8	35346.5	40321.4
Q5U318	Q5U318	PEA15_RAT	Pea15	Astrocytic phosphoprotein PEA-15	1	ISEEDELDTK	ISEEDELDTK	2	ISEEDELDTK2	15474.4	10479.7	11102.3
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	ISEENRVTCNMGK	ISEENRVTC(UniMod:4)NMGK	3	ISEENRVTC(UniMod:4)NMGK3	24860.8	44271.9	37728.2
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	ISEEQQQLQQALAPAQASSSSSTPTR	ISEEQQQLQQALAPAQASSSSSTPTR	3	ISEEQQQLQQALAPAQASSSSSTPTR3	3785.93	2889.35	3947.17
F1LMV2	F1LMV2	F1LMV2_RAT	Fam227a	Family with sequence similarity 227, member A	1	ISEGSWK	ISEGSWK	1	ISEGSWK1	314176	362611	413232
F1LMV2	F1LMV2	F1LMV2_RAT	Fam227a	Family with sequence similarity 227, member A	1	ISEGSWK	ISEGSWK	2	ISEGSWK2	7.37998e+07	8.49899e+07	6.93241e+07
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	ISEHAAHGHFVMCVK	ISEHAAHGHFVMC(UniMod:4)VK	3	ISEHAAHGHFVMC(UniMod:4)VK3	4958.26	4880.76	
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	ISEHAAHGHFVMCVK	ISEHAAHGHFVMC(UniMod:4)VK	4	ISEHAAHGHFVMC(UniMod:4)VK4	24985.1	29489.8	26276.1
B5DEH2	B1WBY7;B5DEH2	ERLN2_RAT	Erlin2	Erlin-2	0	ISEIEDAAFLAR	ISEIEDAAFLAR	2	ISEIEDAAFLAR2	58748.3	43402.9	77961.7
B5DEH2	B1WBY7;B5DEH2	ERLN2_RAT	Erlin2	Erlin-2	0	ISEIEDAAFLAR	ISEIEDAAFLAR	3	ISEIEDAAFLAR3	5943.91	11624.5	8257.54
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	ISEIEKEIAR	ISEIEKEIAR	3	ISEIEKEIAR3	26731.2	70411	51099.8
Q63787	Q63787	P85A_RAT	Pik3r1	Phosphatidylinositol 3-kinase regulatory subunit alpha	1	ISEIIDSR	ISEIIDSR	2	ISEIIDSR2	19853.3	19784.3	18771.1
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	ISEILLDHGAPIQAK	ISEILLDHGAPIQAK	3	ISEILLDHGAPIQAK3	15023.5	15641.5	7792.71
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	ISEISMEGAEPGQVSAASPLANLIER	ISEISMEGAEPGQVSAASPLANLIER	3	ISEISMEGAEPGQVSAASPLANLIER3	3730.71	7067.53	5504.43
Q63797	Q63797	PSME1_RAT	Psme1	Proteasome activator complex subunit 1	1	ISELDAFLK	ISELDAFLK	2	ISELDAFLK2	9995.17		
Q63797	Q63797	PSME1_RAT	Psme1	Proteasome activator complex subunit 1	1	ISELDAFLKEPALNEANLSNLK	ISELDAFLKEPALNEANLSNLK	3	ISELDAFLKEPALNEANLSNLK3	8617.13	14046.7	20163.2
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	ISELEGNLQTLR	ISELEGNLQTLR	2	ISELEGNLQTLR2	24734.7	32780.3	28366
Q01986	Q01986	MP2K1_RAT	Map2k1	Dual specificity mitogen-activated protein kinase kinase 1	1	ISELGAGNGGVVFK	ISELGAGNGGVVFK	2	ISELGAGNGGVVFK2	42811.2	29850.2	34371.2
P36506	P36506	MP2K2_RAT	Map2k2	Dual specificity mitogen-activated protein kinase kinase 2	1	ISELGAGNGGVVTK	ISELGAGNGGVVTK	2	ISELGAGNGGVVTK2	7166.1	7393.04	10862.7
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	ISELTSELTDER	ISELTSELTDER	2	ISELTSELTDER2	16894.4	17019.9	18000.9
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	ISEMEEELK	ISEMEEELK	2	ISEMEEELK2	79493.9	69171.4	87524.3
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	ISEMGSYQELLDRDGAFAEFVR	ISEMGSYQELLDRDGAFAEFVR	3	ISEMGSYQELLDRDGAFAEFVR3	29563.7	24613.6	41485.5
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	ISENFHCDLNSDQFK	ISENFHC(UniMod:4)DLNSDQFK	2	ISENFHC(UniMod:4)DLNSDQFK2		8192.09	
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	ISENFHCDLNSDQFK	ISENFHC(UniMod:4)DLNSDQFK	3	ISENFHC(UniMod:4)DLNSDQFK3	87120.6	87952.4	103420
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	ISENFYFDLNSEQMK	ISENFYFDLNSEQMK	2	ISENFYFDLNSEQMK2	11913.8	10586.6	6352.42
Q4QQV0	Q4QQV0	Q4QQV0_RAT	Tubb6	Tubulin beta chain	1	ISEQFSAMFR	ISEQFSAMFR	2	ISEQFSAMFR2	42697.4	34332.5	38580.5
P85108	P69897;Q4QRB4;Q6P9T8;B4F7C2;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	ISEQFTAMFR	ISEQFTAMFR	2	ISEQFTAMFR2	210364	203590	174202
P85108	P69897;Q4QRB4;Q6P9T8;B4F7C2;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	ISEQFTAMFR	ISEQFTAMFR	3	ISEQFTAMFR3	15171.3	15574.2	14325.2
P85108	P69897;Q4QRB4;Q6P9T8;B4F7C2;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	ISEQFTAMFRR	ISEQFTAMFRR	3	ISEQFTAMFRR3	93375.5	90752.3	78912.5
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	ISEQSDAK	ISEQSDAK	1	ISEQSDAK1			17110.8
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	ISEQSDAK	ISEQSDAK	2	ISEQSDAK2			972085
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	ISEQTYQLSR	ISEQTYQLSR	2	ISEQTYQLSR2	55055.3	38490.8	49356.7
Q6P6Q9	Q6P6Q9	MICU1_RAT	Micu1	Calcium uptake protein 1, mitochondrial	1	ISERQFGGMLLAYSGVQSK	ISERQFGGMLLAYSGVQSK	3	ISERQFGGMLLAYSGVQSK3	11937.9	8122.52	6516.9
Q5GFD9	Q5GFD9	IMPCT_RAT	Impact	Protein IMPACT	1	ISESAPEAEELPPIAHGAPITDR	ISESAPEAEELPPIAHGAPITDR	3	ISESAPEAEELPPIAHGAPITDR3	11917.8	15655.6	8504.42
Q5GFD9	Q5GFD9	IMPCT_RAT	Impact	Protein IMPACT	1	ISESAPEAEELPPIAHGAPITDRR	ISESAPEAEELPPIAHGAPITDRR	4	ISESAPEAEELPPIAHGAPITDRR4	27397.1	25794.8	32402.6
A9CMA6	A9CMA6	TM163_RAT	Tmem163	Transmembrane protein 163	1	ISESGQFSDGFEDR	ISESGQFSDGFEDR	2	ISESGQFSDGFEDR2	22752.7	18241.4	20935.9
D4ACD2	D4ACD2	D4ACD2_RAT	Bach1	BTB domain and CNC homolog 1	1	ISESPEPGQR	ISESPEPGQR	2	ISESPEPGQR2	10260.9	10497.4	15248.6
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	ISESPSEIMESLTK	ISESPSEIMESLTK	2	ISESPSEIMESLTK2	18358.7	18904.5	21871.3
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	ISETTMLQSGMR	ISETTMLQSGMR	2	ISETTMLQSGMR2	10263	9436.44	11359.5
Q5RJR2	Q5RJR2;A0A8I6GGS8	TWF1_RAT	Twf1	Twinfilin-1	0	ISEVQTDVSVDTK	ISEVQTDVSVDTK	2	ISEVQTDVSVDTK2	27734.9	23920.6	18992.6
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	ISEYIVEFEGNREEPGK	ISEYIVEFEGNREEPGK	3	ISEYIVEFEGNREEPGK3	24177.4	30173	23981.9
Q6AXM6	Q6AXM6	Q6AXM6_RAT	Icam2	Intercellular adhesion molecule 2	1	ISEYQSLEVYEIR	ISEYQSLEVYEIR	2	ISEYQSLEVYEIR2		4279.8	3393.06
Q5PQS4	Q5PQS4	GULP1_RAT	Gulp1	PTB domain-containing engulfment adapter protein 1	1	ISFCADDK	ISFC(UniMod:4)ADDK	2	ISFC(UniMod:4)ADDK2	5489	5285.77	4445.01
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	ISFCLDIHNMSVK	ISFC(UniMod:4)LDIHNMSVK	3	ISFC(UniMod:4)LDIHNMSVK3	74556.2	74945.9	69876.7
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	ISFDEFIK	ISFDEFIK	2	ISFDEFIK2	84511.3	72592	78363.5
A0A8J8YFS5	A0A8J8YFS5	A0A8J8YFS5_RAT	Hars1	Histidine--tRNA ligase, cytoplasmic	1	ISFDLSLAR	ISFDLSLAR	2	ISFDLSLAR2	6810.8	5172.26	4587.77
P63100	P63100	CANB1_RAT	Ppp3r1	Calcineurin subunit B type 1	1	ISFEEFCAVVGGLDIHK	ISFEEFC(UniMod:4)AVVGGLDIHK	3	ISFEEFC(UniMod:4)AVVGGLDIHK3	7822.04	11583.7	13356.2
P63100	P63100	CANB1_RAT	Ppp3r1	Calcineurin subunit B type 1	1	ISFEEFCAVVGGLDIHKK	ISFEEFC(UniMod:4)AVVGGLDIHKK	4	ISFEEFC(UniMod:4)AVVGGLDIHKK4	9036	4082.15	6310.17
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	ISFEEFVSLMQELK	ISFEEFVSLMQELK	2	ISFEEFVSLMQELK2		19512	
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	ISFEEFVSLMQELK	ISFEEFVSLMQELK	3	ISFEEFVSLMQELK3	19344.2		
D4A4T0	D4A4T0	D4A4T0_RAT	Stub1	STIP1 homology and U-box containing protein 1	1	ISFELMR	ISFELMR	2	ISFELMR2	14424	12793	12793.1
Q5FVM7	Q5FVM7	DJC16_RAT	Dnajc16	DnaJ homolog subfamily C member 16	1	ISFFHNAVVHENLR	ISFFHNAVVHENLR	4	ISFFHNAVVHENLR4	6292.93	847.185	5460.68
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ISFIVDGPIASFGLSNNINGK	ISFIVDGPIASFGLSNNINGK	3	ISFIVDGPIASFGLSNNINGK3	35592.3	46901.2	23888.1
Q2PQA9	P56536;Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	0	ISFLENNLEQLTK	ISFLENNLEQLTK	2	ISFLENNLEQLTK2	70596.9	87638.6	96838.7
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	ISFLGDEGSAVDNGAETHFK	ISFLGDEGSAVDNGAETHFK	3	ISFLGDEGSAVDNGAETHFK3	6982.9	9665.13	4280.01
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	ISFLPLAR	ISFLPLAR	2	ISFLPLAR2	111800	136568	132101
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	ISFPAVQAAPSFSNSFPK	ISFPAVQAAPSFSNSFPK	2	ISFPAVQAAPSFSNSFPK2	29936.9	23512.9	16058.6
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	ISFPAVQAAPSFSNSFPK	ISFPAVQAAPSFSNSFPK	3	ISFPAVQAAPSFSNSFPK3	9111.74	4414.78	4718.3
G3V6W5	G3V6W5	G3V6W5_RAT	Ifih1	RNA helicase	1	ISFPEVVK	ISFPEVVK	2	ISFPEVVK2	26928.4	19617.6	13976.3
Q5PQL7	Q5PQL7	ITM2C_RAT	Itm2c	Integral membrane protein 2C	1	ISFQPAVAGVK	ISFQPAVAGVK	2	ISFQPAVAGVK2	18469.7	16339.6	14898.8
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	ISFSTSDVSK	ISFSTSDVSK	2	ISFSTSDVSK2	46201	54591.4	50545.9
P51650	P51650	SSDH_RAT	Aldh5a1	Succinate-semialdehyde dehydrogenase, mitochondrial	1	ISFTGSTATGK	ISFTGSTATGK	2	ISFTGSTATGK2		7103.38	
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	ISGADINSICQESGMLAVR	ISGADINSIC(UniMod:4)QESGMLAVR	3	ISGADINSIC(UniMod:4)QESGMLAVR3	11964.9	19832	14261.1
B5DFC3	B5DFC3	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	1	ISGAIGPCVSLNSK	ISGAIGPC(UniMod:4)VSLNSK	2	ISGAIGPC(UniMod:4)VSLNSK2	32380.1	20873.5	22884.1
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	ISGASEKDIVHSGLAYTMER	ISGASEKDIVHSGLAYTMER	3	ISGASEKDIVHSGLAYTMER3	3289.82	4856.8	3959.03
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	ISGASEKDIVHSGLAYTMER	ISGASEKDIVHSGLAYTMER	4	ISGASEKDIVHSGLAYTMER4	19663.3	17118.4	28453.2
P49911	P49911	AN32A_RAT	Anp32a	Acidic leucine-rich nuclear phosphoprotein 32 family member A	1	ISGDLEVLAEK	ISGDLEVLAEK	2	ISGDLEVLAEK2	293482	282121	246113
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	ISGEIIELVLVK	ISGEIIELVLVK	2	ISGEIIELVLVK2	15570.3	16039.5	8068.48
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	ISGETIFVTAPHEATAGIIGVNR	ISGETIFVTAPHEATAGIIGVNR	3	ISGETIFVTAPHEATAGIIGVNR3	185339	196559	192758
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	ISGETIFVTAPHEATAGIIGVNRK	ISGETIFVTAPHEATAGIIGVNRK	3	ISGETIFVTAPHEATAGIIGVNRK3	14923.3	12249.5	9631.26
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	ISGETIFVTAPHEATAGIIGVNRK	ISGETIFVTAPHEATAGIIGVNRK	4	ISGETIFVTAPHEATAGIIGVNRK4	105713	125071	143267
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	ISGFLVPPDSDVYR	ISGFLVPPDSDVYR	2	ISGFLVPPDSDVYR2	104628	108278	98484.8
P58751	P58751	RELN_RAT	Reln	Reelin	1	ISGGQVGTGCGTLSDGR	ISGGQVGTGC(UniMod:4)GTLSDGR	2	ISGGQVGTGC(UniMod:4)GTLSDGR2	207483	221272	184218
P58751	P58751	RELN_RAT	Reln	Reelin	1	ISGGQVGTGCGTLSDGR	ISGGQVGTGC(UniMod:4)GTLSDGR	3	ISGGQVGTGC(UniMod:4)GTLSDGR3	7000.04	9624.17	7455.28
Q6MG59	Q6MG59	G6B_RAT	Mpig6b	Megakaryocyte and platelet inhibitory receptor G6b	1	ISGHLDQEPNLHYADLDHSVLR	ISGHLDQEPNLHYADLDHSVLR	3	ISGHLDQEPNLHYADLDHSVLR3	12761.3	18602.5	9847
Q6MG59	Q6MG59	G6B_RAT	Mpig6b	Megakaryocyte and platelet inhibitory receptor G6b	1	ISGHLDQEPNLHYADLDHSVLR	ISGHLDQEPNLHYADLDHSVLR	4	ISGHLDQEPNLHYADLDHSVLR4	95374.3	65196.2	76888.7
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	ISGISNINFR	ISGISNINFR	2	ISGISNINFR2	13341.4	20278.6	18001.8
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	ISGLEEDLK	ISGLEEDLK	2	ISGLEEDLK2	145640	149730	132204
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	ISGLEEDLKTGK	ISGLEEDLKTGK	3	ISGLEEDLKTGK3		2640.8	10328.5
Q3MID3	Q3MID3	ARFG2_RAT	Arfgap2	ADP-ribosylation factor GTPase-activating protein 2	1	ISGLESSEAR	ISGLESSEAR	2	ISGLESSEAR2	20170.5	12732.4	
P62804	P62804	H4_RAT	H4c16	Histone H4	1	ISGLIYEETR	ISGLIYEETR	2	ISGLIYEETR2	112250	44500.8	49910.6
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ISGLSLDFFSK	ISGLSLDFFSK	2	ISGLSLDFFSK2	1.81902e+06	2.05307e+06	1.8821e+06
A0A8I6AQ74	A0A8I6AQ74	A0A8I6AQ74_RAT	ENSRNOG00000064086	Ig-like domain-containing protein	1	ISGMQPEDEGDYFCLQGSK	ISGMQPEDEGDYFC(UniMod:4)LQGSK	3	ISGMQPEDEGDYFC(UniMod:4)LQGSK3	9835.24	13929.9	9205.75
P41243	P41243	MATK_RAT	Matk	Megakaryocyte-associated tyrosine-protein kinase	1	ISGQEAIQQLQPPEDGLFLVR	ISGQEAIQQLQPPEDGLFLVR	3	ISGQEAIQQLQPPEDGLFLVR3	11885.8	16791.5	16206.6
D3Z916	D3Z916	D3Z916_RAT	Mindy3	Ubiquitin carboxyl-terminal hydrolase MINDY	1	ISGSPAQSSCQVGHSSALAVEELGFER	ISGSPAQSSC(UniMod:4)QVGHSSALAVEELGFER	3	ISGSPAQSSC(UniMod:4)QVGHSSALAVEELGFER3	6695.77	2194.04	
P28075	P28075	PSB5_RAT	Psmb5	Proteasome subunit beta type-5	1	ISGTAFSVGSGSVYAFGVMDR	ISGTAFSVGSGSVYAFGVMDR	3	ISGTAFSVGSGSVYAFGVMDR3	79521.2	67996.3	89907.5
O55156	O55156;Q9JK25	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	0	ISGTTALQEALK	ISGTTALQEALK	2	ISGTTALQEALK2	130030	116841	108287
O55156	O55156;Q9JK25	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	0	ISGTTALQEALKEK	ISGTTALQEALKEK	3	ISGTTALQEALKEK3	57372.2	60400.5	71898.4
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	ISGVALHDQGQYECQAVNIIGSQK	ISGVALHDQGQYEC(UniMod:4)QAVNIIGSQK	3	ISGVALHDQGQYEC(UniMod:4)QAVNIIGSQK3	9931.79	7708.13	12048.3
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	ISGVIGPYR	ISGVIGPYR	2	ISGVIGPYR2	178627	174260	181690
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	ISGYNMK	ISGYNMK	2	ISGYNMK2	75486.6	93783.4	94089
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	ISHAAEELETYR	ISHAAEELETYR	3	ISHAAEELETYR3	18452.3	26605.5	12477.1
A0A0G2K516	A0A0G2K516	A0A0G2K516_RAT	Stx11	Syntaxin 11	1	ISHAQYSALAR	ISHAQYSALAR	2	ISHAQYSALAR2	70485.2	58060.7	53802.7
A0A0G2K516	A0A0G2K516	A0A0G2K516_RAT	Stx11	Syntaxin 11	1	ISHAQYSALAR	ISHAQYSALAR	3	ISHAQYSALAR3	534644	608780	712519
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	ISHEGSPVKPIAVR	ISHEGSPVKPIAVR	3	ISHEGSPVKPIAVR3	7914.13		8814.59
P08721	P08721	OSTP_RAT	Spp1	Osteopontin	1	ISHELESSSSEVN	ISHELESSSSEVN	2	ISHELESSSSEVN2	206201	240545	215682
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	ISHICTDNVK	ISHIC(UniMod:4)TDNVK	2	ISHIC(UniMod:4)TDNVK2	18065.6	9543.36	8921.1
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	ISHICTDNVK	ISHIC(UniMod:4)TDNVK	3	ISHIC(UniMod:4)TDNVK3	128003	138859	113730
Q5PQX1	Q5PQX1	TOIP1_RAT	Tor1aip1	Torsin-1A-interacting protein 1	1	ISHLVLPVQPENALK	ISHLVLPVQPENALK	2	ISHLVLPVQPENALK2	3636.84	3131.87	2147.53
Q5PQX1	Q5PQX1	TOIP1_RAT	Tor1aip1	Torsin-1A-interacting protein 1	1	ISHLVLPVQPENALK	ISHLVLPVQPENALK	3	ISHLVLPVQPENALK3	42669.5	44363.4	39294.5
Q6P752	Q6P752	TOIP2_RAT	Tor1aip2	Torsin-1A-interacting protein 2	1	ISHLVLPVQPVK	ISHLVLPVQPVK	2	ISHLVLPVQPVK2	3355.22	3478.79	2664.58
Q6P752	Q6P752	TOIP2_RAT	Tor1aip2	Torsin-1A-interacting protein 2	1	ISHLVLPVQPVK	ISHLVLPVQPVK	3	ISHLVLPVQPVK3	26774.6	36580.9	42798.8
Q5SGD7	Q5SGD7	CNKR3_RAT	Cnksr3	Connector enhancer of kinase suppressor of ras 3	1	ISHQDLEELGVTR	ISHQDLEELGVTR	3	ISHQDLEELGVTR3	4036.11	2071.7	2800.36
P01026	P01026	CO3_RAT	C3	Complement C3	1	ISHSEEDCLSFK	ISHSEEDC(UniMod:4)LSFK	2	ISHSEEDC(UniMod:4)LSFK2	54073.6	36724.4	29563.4
P01026	P01026	CO3_RAT	C3	Complement C3	1	ISHSEEDCLSFK	ISHSEEDC(UniMod:4)LSFK	3	ISHSEEDC(UniMod:4)LSFK3	477137	485294	402537
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	ISHVSTSSVK	ISHVSTSSVK	2	ISHVSTSSVK2		4330.58	3540.63
P57097	P57097	MERTK_RAT	Mertk	Tyrosine-protein kinase Mer	1	ISHVWESAGTSK	ISHVWESAGTSK	3	ISHVWESAGTSK3	8810.61	2570.31	5535.57
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	ISIEMHGTLEDQLSHLR	ISIEMHGTLEDQLSHLR	3	ISIEMHGTLEDQLSHLR3	102071	94411.9	116666
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	ISIEMHGTLEDQLSHLR	ISIEMHGTLEDQLSHLR	4	ISIEMHGTLEDQLSHLR4	839083	916700	976500
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	ISIEMNGTLEDQLSHLK	ISIEMNGTLEDQLSHLK	2	ISIEMNGTLEDQLSHLK2		5181.33	912.008
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	ISIEMNGTLEDQLSHLK	ISIEMNGTLEDQLSHLK	3	ISIEMNGTLEDQLSHLK3	53247.4	60031.5	68573.2
B0BNE5	B0BNE5	ESTD_RAT	Esd	S-formylglutathione hydrolase	1	ISIFGHSMGGHGALICALK	ISIFGHSMGGHGALIC(UniMod:4)ALK	3	ISIFGHSMGGHGALIC(UniMod:4)ALK3	9927.06	14048.9	18429.9
B0BNE5	B0BNE5	ESTD_RAT	Esd	S-formylglutathione hydrolase	1	ISIFGHSMGGHGALICALK	ISIFGHSMGGHGALIC(UniMod:4)ALK	4	ISIFGHSMGGHGALIC(UniMod:4)ALK4	7923.32	12038.8	5638.39
Q8R492	Q8R492	Q8R492_RAT	Fap	Fibroblast activation protein, alpha	1	ISIGNSPPSK	ISIGNSPPSK	2	ISIGNSPPSK2	13337.6	11025.5	5027.38
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ISIGNVVK	ISIGNVVK	1	ISIGNVVK1	13651.8	14828.7	14968.1
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	ISIGNVVK	ISIGNVVK	2	ISIGNVVK2	4.71103e+06	4.12657e+06	4.93584e+06
F1M386	F1M386	RPGF2_RAT	Rapgef2	Rap guanine nucleotide exchange factor 2	1	ISILPQKPYNDIGIGQSQDDSIVGLR	ISILPQKPYNDIGIGQSQDDSIVGLR	3	ISILPQKPYNDIGIGQSQDDSIVGLR3	7521.11	7791.94	6902.83
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	ISILYYQLGDHELSLSEVR	ISILYYQLGDHELSLSEVR	3	ISILYYQLGDHELSLSEVR3	53261	43437.9	25389.6
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	ISIMHEDWCWR	ISIMHEDWC(UniMod:4)WR	2	ISIMHEDWC(UniMod:4)WR2	4203.31	1603.44	2323.55
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	ISIMHEDWCWR	ISIMHEDWC(UniMod:4)WR	3	ISIMHEDWC(UniMod:4)WR3	56999.4	66449.1	71383.3
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	ISINQTPGTK	ISINQTPGTK	2	ISINQTPGTK2	11821.2	12426.5	14735.4
A0A8I6GH74	A0A8I6GH74	A0A8I6GH74_RAT	Fam172a	Family with sequence similarity 172, member A	1	ISIPVDATESEPK	ISIPVDATESEPK	2	ISIPVDATESEPK2	16104.9	12673.6	19266.9
Q63471	Q63471	BPIA2_RAT	Bpifa2	BPI fold-containing family A member 2	1	ISISLLGR	ISISLLGR	2	ISISLLGR2	61142.9	53841	63693
B1WBV4	B1WBV4	B1WBV4_RAT	Plekhf2	Pleckstrin homology and FYVE domain containing 2	1	ISIVESCFGAAGQPLTIPGR	ISIVESC(UniMod:4)FGAAGQPLTIPGR	3	ISIVESC(UniMod:4)FGAAGQPLTIPGR3	45203.1	43564.3	34018.8
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	ISIVVETVYTHVLHPYPTQITQSEK	ISIVVETVYTHVLHPYPTQITQSEK	3	ISIVVETVYTHVLHPYPTQITQSEK3	14848	17158.7	19123.4
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	ISIVVETVYTHVLHPYPTQITQSEK	ISIVVETVYTHVLHPYPTQITQSEK	4	ISIVVETVYTHVLHPYPTQITQSEK4	94036.3	85697.7	99297.5
Q9Z0V5	Q9Z0V5	PRDX4_RAT	Prdx4	Peroxiredoxin-4	1	ISKPAPYWEGTAVINGEFK	ISKPAPYWEGTAVINGEFK	3	ISKPAPYWEGTAVINGEFK3	28746.8	24831.9	27727.3
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	ISKPGLEK	ISKPGLEK	2	ISKPGLEK2	8594.65	8046.07	7947.81
P08689	P08689	SHBG_RAT	Shbg	Sex hormone-binding globulin	1	ISKPSSSFEFR	ISKPSSSFEFR	2	ISKPSSSFEFR2		3806.14	4240.22
P08689	P08689	SHBG_RAT	Shbg	Sex hormone-binding globulin	1	ISKPSSSFEFR	ISKPSSSFEFR	3	ISKPSSSFEFR3	35414.3	28138.2	36759
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	ISKYPTLK	ISKYPTLK	2	ISKYPTLK2	6248.78	2516.36	8243.88
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	ISLADIAQK	ISLADIAQK	2	ISLADIAQK2	288588	355366	315960
D4A415	D4A415	D4A415_RAT	Abraxas2	Abraxas 2, BRISC complex subunit	1	ISLAIPNLGNTSQQEYK	ISLAIPNLGNTSQQEYK	2	ISLAIPNLGNTSQQEYK2	43569.5	42526.1	41519.2
D4A415	D4A415	D4A415_RAT	Abraxas2	Abraxas 2, BRISC complex subunit	1	ISLAIPNLGNTSQQEYK	ISLAIPNLGNTSQQEYK	3	ISLAIPNLGNTSQQEYK3	13311.3	17887.2	12498.3
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	ISLCHGNPSFR	ISLC(UniMod:4)HGNPSFR	2	ISLC(UniMod:4)HGNPSFR2	69494.2	39630.4	44124.9
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	ISLCHGNPSFR	ISLC(UniMod:4)HGNPSFR	3	ISLC(UniMod:4)HGNPSFR3	767618	695940	587947
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	ISLCHGNPSFSSETK	ISLC(UniMod:4)HGNPSFSSETK	2	ISLC(UniMod:4)HGNPSFSSETK2	251750	162208	149260
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	ISLCHGNPSFSSETK	ISLC(UniMod:4)HGNPSFSSETK	3	ISLC(UniMod:4)HGNPSFSSETK3	4.33845e+06	3.09689e+06	2.9935e+06
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	ISLCHGNPTFSSETK	ISLC(UniMod:4)HGNPTFSSETK	2	ISLC(UniMod:4)HGNPTFSSETK2	13133.5	16036.4	11136.6
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	ISLCHGNPTFSSETK	ISLC(UniMod:4)HGNPTFSSETK	3	ISLC(UniMod:4)HGNPTFSSETK3	536127	460860	415013
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	ISLCHGNPTFSSETKSGCKEEDSR	ISLC(UniMod:4)HGNPTFSSETKSGC(UniMod:4)KEEDSR	4	ISLC(UniMod:4)HGNPTFSSETKSGC(UniMod:4)KEEDSR4	8692.03		5385.46
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	ISLEFNNK	ISLEFNNK	2	ISLEFNNK2	189788	239031	171004
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	ISLEIMTLQPR	ISLEIMTLQPR	2	ISLEIMTLQPR2	1400.31	3871.79	6058.33
A0A8I6GJC5	A0A8I6GJC5	A0A8I6GJC5_RAT	Reps1	RALBP1 associated Eps domain containing 1	1	ISLEVQLEQLRPFSHL	ISLEVQLEQLRPFSHL	3	ISLEVQLEQLRPFSHL3	44745.2	32344.3	10800.4
Q99P99	Q99P99	HDAC4_RAT	Hdac4	Histone deacetylase 4	1	ISLFPGTHLTPYLSTSPLER	ISLFPGTHLTPYLSTSPLER	3	ISLFPGTHLTPYLSTSPLER3	4295.17	5248.9	5184.89
P62832	P62832	RL23_RAT	Rpl23	Large ribosomal subunit protein uL14	1	ISLGLPVGAVINCADNTGAK	ISLGLPVGAVINC(UniMod:4)ADNTGAK	3	ISLGLPVGAVINC(UniMod:4)ADNTGAK3		11170.6	6673.8
Q63678	Q63678	ZA2G_RAT	Azgp1	Zinc-alpha-2-glycoprotein	1	ISLHWNQASK	ISLHWNQASK	2	ISLHWNQASK2	6056.59	9116.77	1525.91
Q63678	Q63678	ZA2G_RAT	Azgp1	Zinc-alpha-2-glycoprotein	1	ISLHWNQASK	ISLHWNQASK	3	ISLHWNQASK3	161822	147481	138377
P07633	P07633	PCCB_RAT	Pccb	Propionyl-CoA carboxylase beta chain, mitochondrial	1	ISLLLDPGSFLESDMFVEHR	ISLLLDPGSFLESDMFVEHR	3	ISLLLDPGSFLESDMFVEHR3	4612.64	6884.99	4010.14
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	ISLLNNEK	ISLLNNEK	2	ISLLNNEK2	62576	76480	81853.5
D3ZLA3	D3ZLA3	D3ZLA3_RAT	Cpne3	Copine 3	1	ISLNSLCYGDMDK	ISLNSLC(UniMod:4)YGDMDK	2	ISLNSLC(UniMod:4)YGDMDK2	21665.6	14881.1	17439.1
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	ISLNTLTLNVK	ISLNTLTLNVK	2	ISLNTLTLNVK2	20079.7	12768.7	17114.8
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	ISLNTYTPTK	ISLNTYTPTK	2	ISLNTYTPTK2	10417.1	14728.8	15796.4
P31000	P31000	VIME_RAT	Vim	Vimentin	1	ISLPLPNFSSLNLR	ISLPLPNFSSLNLR	2	ISLPLPNFSSLNLR2	25764.5	23213.4	25538.3
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	ISLPVILMDETLK	ISLPVILMDETLK	2	ISLPVILMDETLK2	29544.3	28301.7	32300.2
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	ISLPVILMDETLK	ISLPVILMDETLK	3	ISLPVILMDETLK3			2469.96
P37199	P37199	NU155_RAT	Nup155	Nuclear pore complex protein Nup155	1	ISLQAIQQLVR	ISLQAIQQLVR	2	ISLQAIQQLVR2		13385.4	7633.88
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	ISLQDLSK	ISLQDLSK	2	ISLQDLSK2	126235	117004	111090
P14740	P14740	DPP4_RAT	Dpp4	Dipeptidyl peptidase 4	1	ISLQWLR	ISLQWLR	2	ISLQWLR2	7093.38	11371.8	4490.64
Q6Q0N0	Q6Q0N0	CSTN1_RAT	Clstn1	Calsyntenin-1	1	ISLSGVHHFAR	ISLSGVHHFAR	3	ISLSGVHHFAR3	15891.9	9408.14	15618.3
O88277	O88277	FAT2_RAT	Fat2	Protocadherin Fat 2	1	ISLTQVLDK	ISLTQVLDK	2	ISLTQVLDK2	8337.02	7012.39	5651.56
Q5FVM3	Q5FVM3	RETR1_RAT	Retreg1	Reticulophagy regulator 1	1	ISLTVAAK	ISLTVAAK	2	ISLTVAAK2	73989.9	68112	63249.6
O88658	O88658;F1M4A4	KIF1B_RAT	Kif1b	Kinesin-like protein KIF1B	0	ISLVDLAGSER	ISLVDLAGSER	2	ISLVDLAGSER2	9902.64	10132.7	14359.6
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	ISMADVK	ISMADVK	1	ISMADVK1	11154.4	14699	10697.5
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	ISMADVK	ISMADVK	2	ISMADVK2	726282	716469	748925
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	ISMADYVSGELEHVTR	ISMADYVSGELEHVTR	3	ISMADYVSGELEHVTR3	25980.6	27479.2	29784.4
M0R8J3	M0R8J3	M0R8J3_RAT	Jmy	Junction mediating and regulatory protein, p53 cofactor	1	ISMENDYLGPR	ISMENDYLGPR	2	ISMENDYLGPR2	5349.04	3851.87	
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	ISMFCHVEPEQVICVHDVSSIYR	ISMFC(UniMod:4)HVEPEQVIC(UniMod:4)VHDVSSIYR	3	ISMFC(UniMod:4)HVEPEQVIC(UniMod:4)VHDVSSIYR3	10795	17316	8487.2
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	ISMFCHVEPEQVICVHDVSSIYR	ISMFC(UniMod:4)HVEPEQVIC(UniMod:4)VHDVSSIYR	4	ISMFC(UniMod:4)HVEPEQVIC(UniMod:4)VHDVSSIYR4	95516.5	121257	103310
Q5U2N0	Q5U2N0	PYRG2_RAT	Ctps2	CTP synthase 2	1	ISMFCHVNPEQVICIHDVSSIYR	ISMFC(UniMod:4)HVNPEQVIC(UniMod:4)IHDVSSIYR	4	ISMFC(UniMod:4)HVNPEQVIC(UniMod:4)IHDVSSIYR4	3339.98	4744	
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	ISMFQTYAEVAMVSPSK	ISMFQTYAEVAMVSPSK	2	ISMFQTYAEVAMVSPSK2	33748.9	29438.8	37696.2
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	ISMFQTYAEVAMVSPSK	ISMFQTYAEVAMVSPSK	3	ISMFQTYAEVAMVSPSK3	6136.58	2280.57	4565.34
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	ISMINNPSR	ISMINNPSR	2	ISMINNPSR2	190976	219628	189238
P18292	P18292	THRB_RAT	F2	Prothrombin	1	ISMLEKIYIHPR	ISMLEKIYIHPR	3	ISMLEKIYIHPR3	15738.2	18600.4	13523
A0A0G2JUA5	A0A0G2JUA5	A0A0G2JUA5_RAT	Ahnak	AHNAK nucleoprotein	1	ISMPDVDLHIK	ISMPDVDLHIK	3	ISMPDVDLHIK3			8784.36
A0A0G2JUA5	A0A0G2JUA5	A0A0G2JUA5_RAT	Ahnak	AHNAK nucleoprotein	1	ISMPDVDLHLK	ISMPDVDLHLK	3	ISMPDVDLHLK3	10288		
D4A746	D4A746	D4A746_RAT	Gmppb	GDP-mannose pyrophosphorylase B	1	ISMSHEEEPLGTAGPLALAR	ISMSHEEEPLGTAGPLALAR	3	ISMSHEEEPLGTAGPLALAR3		12044	16567
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	ISMVEELEK	ISMVEELEK	2	ISMVEELEK2	75321.9	58858.7	63941.1
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	ISNAQLQTELVEILK	ISNAQLQTELVEILK	2	ISNAQLQTELVEILK2	4548.98	8900.15	8127.52
Q9WVS2	Q9WVS2	OSGEP_RAT	Osgep	tRNA N6-adenosine threonylcarbamoyltransferase	1	ISNDPSPGYNIEQMAK	ISNDPSPGYNIEQMAK	2	ISNDPSPGYNIEQMAK2	4226.13	9720	8177.19
Q63356	D4A7X9;Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	0	ISNFLLEK	ISNFLLEK	2	ISNFLLEK2	10715.6	11200.5	11600.1
Q5M7A4	Q5M7A4	UBA5_RAT	Uba5	Ubiquitin-like modifier-activating enzyme 5	1	ISNGGLEEGQPVDLVLSCVDNFEAR	ISNGGLEEGQPVDLVLSC(UniMod:4)VDNFEAR	3	ISNGGLEEGQPVDLVLSC(UniMod:4)VDNFEAR3	23693.1	9927.52	19088.2
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	ISNINEK	ISNINEK	2	ISNINEK2	45454.9	70917.8	52437.2
A0A8I6AT07	A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	1	ISNIPLDSETHNYQIVNHDQK	ISNIPLDSETHNYQIVNHDQK	4	ISNIPLDSETHNYQIVNHDQK4	17310.5	26634.5	25701.3
B2GUX7	B2GUX7	B2GUX7_RAT	Creg1	Cellular repressor of E1A-stimulated genes 1	1	ISNIWVLDYFGGPK	ISNIWVLDYFGGPK	2	ISNIWVLDYFGGPK2	6248.14		5957.6
A0A0G2JU49	A0A0G2JU49	A0A0G2JU49_RAT	Mtx1	Metaxin 1	1	ISNPWQSPSGTLPALR	ISNPWQSPSGTLPALR	2	ISNPWQSPSGTLPALR2	41732	43514.6	41393
A0A0G2JU49	A0A0G2JU49	A0A0G2JU49_RAT	Mtx1	Metaxin 1	1	ISNPWQSPSGTLPALR	ISNPWQSPSGTLPALR	3	ISNPWQSPSGTLPALR3	8668.6	6829.11	15159.4
Q5PQQ8	Q5PQQ8	ITGBL_RAT	Itgbl1	Integrin beta-like protein 1	1	ISNQMCK	ISNQMC(UniMod:4)K	2	ISNQMC(UniMod:4)K2	104283	16797.6	41460
A0A8I5ZR58	A0A8I5ZR58	A0A8I5ZR58_RAT	Cux1-ps1	Protein CASP	1	ISNSDLSGR	ISNSDLSGR	2	ISNSDLSGR2	19323.7	21014.3	26909.2
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	ISNVEFYHSGQEGYR	ISNVEFYHSGQEGYR	2	ISNVEFYHSGQEGYR2	2745.54	500.986	3494.89
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	ISNVEFYHSGQEGYR	ISNVEFYHSGQEGYR	3	ISNVEFYHSGQEGYR3	54993	55503.3	58577.4
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	ISNVGSNSAR	ISNVGSNSAR	2	ISNVGSNSAR2	8142.66		9127.4
Q6AYK6	Q6AYK6	CYBP_RAT	Cacybp	Calcyclin-binding protein	1	ISNYGWDQSDK	ISNYGWDQSDK	2	ISNYGWDQSDK2	37425.1	20576.6	24219
Q6AYK6	Q6AYK6	CYBP_RAT	Cacybp	Calcyclin-binding protein	1	ISNYGWDQSDKFVK	ISNYGWDQSDKFVK	3	ISNYGWDQSDKFVK3	38779.8	33707.7	31408
A0A8I6AHQ9	A0A8I6AHQ9	A0A8I6AHQ9_RAT	Xpot	Exportin-T	1	ISPDAWQVCAEALAQK	ISPDAWQVC(UniMod:4)AEALAQK	2	ISPDAWQVC(UniMod:4)AEALAQK2	6429.88	3368.03	7463.26
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	ISPDLCGR	ISPDLC(UniMod:4)GR	2	ISPDLC(UniMod:4)GR2	258308	273332	251950
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	ISPDWISSMSIIR	ISPDWISSMSIIR	2	ISPDWISSMSIIR2	29617	15070.8	22388.8
Q01129	Q01129	PGS2_RAT	Dcn	Decorin	1	ISPEAFKPLVK	ISPEAFKPLVK	3	ISPEAFKPLVK3	65113.7	66516.7	52126.9
P63086	P21708;P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	0	ISPFEHQTYCQR	ISPFEHQTYC(UniMod:4)QR	2	ISPFEHQTYC(UniMod:4)QR2	55265.6	37877.1	37550.7
P63086	P21708;P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	0	ISPFEHQTYCQR	ISPFEHQTYC(UniMod:4)QR	3	ISPFEHQTYC(UniMod:4)QR3	187353	266958	200455
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	ISPIILNTVMTIMAALSPK	ISPIILNTVMTIMAALSPK	3	ISPIILNTVMTIMAALSPK3	2326.7	1445.44	
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	ISPLQFR	ISPLQFR	2	ISPLQFR2	953313	1.10009e+06	1.00445e+06
Q6P7Q1	Q6P7Q1	BABA2_RAT	Babam2	BRISC and BRCA1-A complex member 2	1	ISPMLSPFISSVVR	ISPMLSPFISSVVR	2	ISPMLSPFISSVVR2	117082	98546.8	94616.8
Q6P7Q1	Q6P7Q1	BABA2_RAT	Babam2	BRISC and BRCA1-A complex member 2	1	ISPMLSPFISSVVR	ISPMLSPFISSVVR	3	ISPMLSPFISSVVR3	7984.73	4931.88	9780.67
P0C588	P0C588	CNNM4_RAT	Cnnm4	Metal transporter CNNM4	1	ISPQLLLAAHR	ISPQLLLAAHR	3	ISPQLLLAAHR3	7358.03	8195.27	6156.99
Q497C3	Q497C3	MTL26_RAT	Mettl26	Methyltransferase-like 26	1	ISPQSNVDFDLTLR	ISPQSNVDFDLTLR	2	ISPQSNVDFDLTLR2	7572.36	13876.3	9678
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	ISPQVPNEVLGPELVHVSEK	ISPQVPNEVLGPELVHVSEK	3	ISPQVPNEVLGPELVHVSEK3	19923.8	10957.5	23347.5
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	ISPTFADAYSNMGNTLK	ISPTFADAYSNMGNTLK	2	ISPTFADAYSNMGNTLK2	16331.2	10913.1	14208.1
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	ISPYTFCK	ISPYTFC(UniMod:4)K	2	ISPYTFC(UniMod:4)K2	298610	318472	309949
P09650	P09650	MCPT1_RAT	Mcpt1	Mast cell protease 1	1	ISPYVPWINK	ISPYVPWINK	2	ISPYVPWINK2	31925.6	51337.7	44741.8
D4AB01	D4AB01	D4AB01_RAT	Hint2	Histidine triad nucleotide binding protein 2	1	ISQAEEDDQQLLGHLLLVAK	ISQAEEDDQQLLGHLLLVAK	3	ISQAEEDDQQLLGHLLLVAK3	12718	18727.6	14726
G3V7P1	G3V7P1	STX12_RAT	Stx12	Syntaxin-12	1	ISQATAQIK	ISQATAQIK	2	ISQATAQIK2	70022.1	65076.6	85480.2
D3ZZL9	D3ZZL9	GCC2_RAT	Gcc2	GRIP and coiled-coil domain-containing protein 2	1	ISQEFETMK	ISQEFETMK	2	ISQEFETMK2	4083.8	9545.98	
Q9R1J8	Q9R1J8	P3H1_RAT	P3h1	Prolyl 3-hydroxylase 1	1	ISQEIGNLMK	ISQEIGNLMK	2	ISQEIGNLMK2	7000.93	6732.61	2207.36
A0A096MK24	A0A096MK24	A0A096MK24_RAT	Morc4	Microrchidia 4	1	ISQENFETSPISR	ISQENFETSPISR	2	ISQENFETSPISR2	5213.56		3422.64
A0A8I5ZQE4	A0A8I5ZQE4	A0A8I5ZQE4_RAT	Supt5h	Transcription elongation factor SPT5	1	ISQGPYK	ISQGPYK	2	ISQGPYK2	14088	14034.8	14484.5
Q5XIL2	Q5XIL2	P4K2B_RAT	Pi4k2b	Phosphatidylinositol 4-kinase type 2-beta	1	ISQGSSGSYFVK	ISQGSSGSYFVK	2	ISQGSSGSYFVK2	8163.79		4450.69
Q68FT3	Q68FT3	PYRD2_RAT	Pyroxd2	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2	1	ISQLDTQSPVTK	ISQLDTQSPVTK	2	ISQLDTQSPVTK2	18403.7	12466.4	9559.95
D3ZD73	D3ZD73	D3ZD73_RAT	Ddx6	DEAD-box helicase 6	1	ISQLGYSCFYIHAK	ISQLGYSC(UniMod:4)FYIHAK	3	ISQLGYSC(UniMod:4)FYIHAK3	5440.2	2392.19	
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	ISQLSQLTQLELK	ISQLSQLTQLELK	2	ISQLSQLTQLELK2	15524.2	15855.9	6737.59
Q4V7C6	Q4V7C6	GUAA_RAT	Gmps	GMP synthase [glutamine-hydrolyzing]	1	ISQMPVILTPLHFDRDPLQK	ISQMPVILTPLHFDRDPLQK	4	ISQMPVILTPLHFDRDPLQK4	9887.91	3276.24	6757.83
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	ISQMTNLQELHLCHCPAK	ISQMTNLQELHLC(UniMod:4)HC(UniMod:4)PAK	3	ISQMTNLQELHLC(UniMod:4)HC(UniMod:4)PAK3	3857.54	5144.33	3785.68
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	ISQMTNLQELHLCHCPAK	ISQMTNLQELHLC(UniMod:4)HC(UniMod:4)PAK	4	ISQMTNLQELHLC(UniMod:4)HC(UniMod:4)PAK4	6392.78	5289.37	11872.6
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	ISQNFLSSINEEITPR	ISQNFLSSINEEITPR	2	ISQNFLSSINEEITPR2	5117.03	4009.17	9619.21
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	ISQNFLSSINEEITPR	ISQNFLSSINEEITPR	3	ISQNFLSSINEEITPR3	3591.82	4660.6	2387.55
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	ISQPDDINSFSLVEQPSDK	ISQPDDINSFSLVEQPSDK	3	ISQPDDINSFSLVEQPSDK3	2929.82		
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	ISQPEMILK	ISQPEMILK	2	ISQPEMILK2	16366.5	19973.4	15235.4
D3Z8E6	D3Z8E6	CAMP1_RAT	Camsap1	Calmodulin-regulated spectrin-associated protein 1	1	ISQQQEQLLMK	ISQQQEQLLMK	2	ISQQQEQLLMK2		3419.29	948.881
Q5GAM5	Q5GAM5	Q5GAM5_RAT	Ang2	Angiogenin ribonuclease 2	1	ISQSPFQITTCK	ISQSPFQITTC(UniMod:4)K	2	ISQSPFQITTC(UniMod:4)K2	23046.4	27735.1	26653.3
P08753	P08753	GNAI3_RAT	Gnai3	Guanine nucleotide-binding protein G(i) subunit alpha-3	1	ISQTNYIPTQQDVLR	ISQTNYIPTQQDVLR	2	ISQTNYIPTQQDVLR2	141070	178281	151814
P08753	P08753	GNAI3_RAT	Gnai3	Guanine nucleotide-binding protein G(i) subunit alpha-3	1	ISQTNYIPTQQDVLR	ISQTNYIPTQQDVLR	3	ISQTNYIPTQQDVLR3	37714.9	34131.6	49738.4
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	ISQVEDPHVGLAYVFGPYSK	ISQVEDPHVGLAYVFGPYSK	3	ISQVEDPHVGLAYVFGPYSK3	85584.9	110126	110888
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	ISQVQLADSGVFTCVASSPAGVANR	ISQVQLADSGVFTC(UniMod:4)VASSPAGVANR	3	ISQVQLADSGVFTC(UniMod:4)VASSPAGVANR3	1282.52		2334.12
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	ISQVSSGETEYNPGEAR	ISQVSSGETEYNPGEAR	2	ISQVSSGETEYNPGEAR2	8368.51	14925.6	12848
P61023	A0A8I6AT96;P61023;A0A8I6AI64	CHP1_RAT	Chp1	Calcineurin B homologous protein 1	0	ISRDELLQVLR	ISRDELLQVLR	3	ISRDELLQVLR3	15609.2	11124.4	16845.3
P58366	P58366	ANKH_RAT	Ankh	Progressive ankylosis protein homolog	1	ISRPIVNLFVSR	ISRPIVNLFVSR	3	ISRPIVNLFVSR3	6379.73	5107.32	2227.74
A0A8I5ZRU2	A0A8I5ZRU2	A0A8I5ZRU2_RAT	ENSRNOG00000063550	Ig-like domain-containing protein	1	ISRVEPEDLGVYYCLQR	ISRVEPEDLGVYYC(UniMod:4)LQR	3	ISRVEPEDLGVYYC(UniMod:4)LQR3	2386.29	4543.08	3536.56
A0A8I6A1H4	A0A8I6A1H4	A0A8I6A1H4_RAT	Tmppe	Transmembrane protein with metallophosphoesterase domain	1	ISSASGDPDSGGGER	ISSASGDPDSGGGER	2	ISSASGDPDSGGGER2	3369.07		
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	ISSDLDGHPVPK	ISSDLDGHPVPK	2	ISSDLDGHPVPK2	9291.89	5553.71	8899.04
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	ISSDLDGHPVPK	ISSDLDGHPVPK	3	ISSDLDGHPVPK3	157720	103788	136846
A0A8I6ADN8	A0A8I6ADN8	A0A8I6ADN8_RAT	Dock10	Dedicator of cytokinesis 10	1	ISSEDLLR	ISSEDLLR	2	ISSEDLLR2	5932.48	5563.86	
F7F5Q9	F7F5Q9	F7F5Q9_RAT	Hcls1	Hematopoietic cell specific Lyn substrate 1	1	ISSEVWPPAESHLPPQSEPVGGR	ISSEVWPPAESHLPPQSEPVGGR	3	ISSEVWPPAESHLPPQSEPVGGR3	69290.7	111888	208060
A0A0G2K999	A0A0G2K999	A0A0G2K999_RAT	Sdk2	Sidekick cell adhesion molecule 2	1	ISSFPRPQVTWFR	ISSFPRPQVTWFR	3	ISSFPRPQVTWFR3		3758.7	
O35462	O35462	ANGP2_RAT	Angpt2	Angiopoietin-2	1	ISSISQPGSDFSTK	ISSISQPGSDFSTK	2	ISSISQPGSDFSTK2	25458.3	25847.6	24105.3
D3ZZL9	D3ZZL9	GCC2_RAT	Gcc2	GRIP and coiled-coil domain-containing protein 2	1	ISSLAEEK	ISSLAEEK	2	ISSLAEEK2	4741.8	7234.06	7402.66
Q6AY97	Q6AY97	CCD91_RAT	Ccdc91	Coiled-coil domain-containing protein 91	1	ISSLETK	ISSLETK	2	ISSLETK2	26046.6	24905.1	32401.4
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	ISSLGSQAMQMER	ISSLGSQAMQMER	2	ISSLGSQAMQMER2	23012.2	27619.9	33432.5
P62243	Q6TXJ0;D3ZIE1;P62243	RS8_RAT	Rps8	Small ribosomal subunit protein eS8	0	ISSLLEEQFQQGK	ISSLLEEQFQQGK	2	ISSLLEEQFQQGK2	30026.1	22450.2	20153.5
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	ISSMEGER	ISSMEGER	2	ISSMEGER2	33331.8	38853.1	27483.9
O70257	O70257	STX7_RAT	Stx7	Syntaxin-7	1	ISSNIQK	ISSNIQK	2	ISSNIQK2	228515	256371	
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	ISSNLADFAFSLYR	ISSNLADFAFSLYR	2	ISSNLADFAFSLYR2	98157.6	139140	108925
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	ISSNLADFAFSLYR	ISSNLADFAFSLYR	3	ISSNLADFAFSLYR3	36932.1	65326.2	75821
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	ISSNVVMVPSAYSK	ISSNVVMVPSAYSK	2	ISSNVVMVPSAYSK2	28966	39109.4	40315.7
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	ISSPLFNTK	ISSPLFNTK	2	ISSPLFNTK2	19628.2	14952	16210.3
D4A6U4	D4A6U4	D4A6U4_RAT	Tecpr2	Tectonin beta-propeller repeat containing 2	1	ISSRPEGLASIVR	ISSRPEGLASIVR	3	ISSRPEGLASIVR3	15845.2	9252.7	15621.9
B2RZC9	B2RZC9	KTAP2_RAT	Krtcap2	Keratinocyte-associated protein 2	1	ISSTLYQATAPALTPAK	ISSTLYQATAPALTPAK	2	ISSTLYQATAPALTPAK2	47827.5	37952.5	57336.1
B2RZC9	B2RZC9	KTAP2_RAT	Krtcap2	Keratinocyte-associated protein 2	1	ISSTLYQATAPALTPAK	ISSTLYQATAPALTPAK	3	ISSTLYQATAPALTPAK3	13325.3	9589.59	11249.9
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	ISSTTSELTK	ISSTTSELTK	2	ISSTTSELTK2	25408.8	22124.7	33891.6
Q4V888	Q4V888	PP4P2_RAT	Pip4p2	Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase	1	ISSVGSALPR	ISSVGSALPR	2	ISSVGSALPR2	24618.2	25937.2	25804.8
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	ISSVQSIVPALEIANAHR	ISSVQSIVPALEIANAHR	2	ISSVQSIVPALEIANAHR2	121672	90749.4	114772
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	ISSVQSIVPALEIANAHR	ISSVQSIVPALEIANAHR	3	ISSVQSIVPALEIANAHR3	571247	521654	621737
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	ISSVQSIVPALEIANAHR	ISSVQSIVPALEIANAHR	4	ISSVQSIVPALEIANAHR4	4792.88	983.991	2807.07
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	ISSYVSWIK	ISSYVSWIK	2	ISSYVSWIK2	45091.5	57082.1	41944.6
Q63803	Q63803	GNAS1_RAT	Gnas	Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas	1	ISTASGDGR	ISTASGDGR	2	ISTASGDGR2			35178.8
Q63686	Q63686	CDK16_RAT	Cdk16	Cyclin-dependent kinase 16	1	ISTEDINK	ISTEDINK	2	ISTEDINK2	11852.4	15773.8	12690
P24473	P24473	GSTK1_RAT	Gstk1	Glutathione S-transferase kappa 1	1	ISTELVK	ISTELVK	2	ISTELVK2	221565	177055	173734
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	ISTESSPGLPAHK	ISTESSPGLPAHK	2	ISTESSPGLPAHK2	60759.8	56988.9	48325.6
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	ISTESSPGLPAHK	ISTESSPGLPAHK	3	ISTESSPGLPAHK3	716654	811525	881901
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	ISTEVGITNVDLSTVDKDQSIAPK	ISTEVGITNVDLSTVDKDQSIAPK	3	ISTEVGITNVDLSTVDKDQSIAPK3	177548	182436	181794
Q3SWT5	Q3SWT5	S41A3_RAT	Slc41a3	Solute carrier family 41 member 3	1	ISTFLHMWSTPGVLPVQMK	ISTFLHMWSTPGVLPVQMK	3	ISTFLHMWSTPGVLPVQMK3	5130.06	3488.54	5514.43
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	ISTGGGETEETLQK	ISTGGGETEETLQK	2	ISTGGGETEETLQK2	19114.9	17882.8	14408.4
Q4V8A2	Q4V8A2	CDC27_RAT	Cdc27	Cell division cycle protein 27 homolog	1	ISTITPQIQAFNLQK	ISTITPQIQAFNLQK	2	ISTITPQIQAFNLQK2	6970.03	5572.35	13077.4
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	ISTLGDCYYCVAGCPEPR	ISTLGDC(UniMod:4)YYC(UniMod:4)VAGC(UniMod:4)PEPR	3	ISTLGDC(UniMod:4)YYC(UniMod:4)VAGC(UniMod:4)PEPR3	14293.5	19373.5	18240.6
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	ISTPVDVNNR	ISTPVDVNNR	2	ISTPVDVNNR2	271149	224474	251257
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	ISTRPFLNNIEK	ISTRPFLNNIEK	3	ISTRPFLNNIEK3	35682.3	42668.5	33234.8
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	ISTSIVDLR	ISTSIVDLR	2	ISTSIVDLR2	19950.1	22797.2	21478.2
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	ISTSNGSPGFDYHQPGDK	ISTSNGSPGFDYHQPGDK	2	ISTSNGSPGFDYHQPGDK2	4350.66	6832.47	5800.05
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	ISTSNGSPGFDYHQPGDK	ISTSNGSPGFDYHQPGDK	3	ISTSNGSPGFDYHQPGDK3	24390	26542.1	18011.3
M0R5F1	M0R5F1	M0R5F1_RAT	Aspn	Asporin	1	ISTVELEDFK	ISTVELEDFK	2	ISTVELEDFK2	4728.99	14865	15429.6
M0R5F1	M0R5F1	M0R5F1_RAT	Aspn	Asporin	1	ISTVELEDFKR	ISTVELEDFKR	2	ISTVELEDFKR2	11689.6	9420.89	14618.7
M0R5F1	M0R5F1	M0R5F1_RAT	Aspn	Asporin	1	ISTVELEDFKR	ISTVELEDFKR	3	ISTVELEDFKR3	42975.7	56269.1	41729.4
P28075	P28075	PSB5_RAT	Psmb5	Proteasome subunit beta type-5	1	ISVAAASK	ISVAAASK	1	ISVAAASK1	10893.3	9209.78	3289.4
P00507	P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	1	ISVAGVTSGNVGYLAHAIHQVTK	ISVAGVTSGNVGYLAHAIHQVTK	3	ISVAGVTSGNVGYLAHAIHQVTK3	17872.7	15160.6	16472.8
P00507	P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	1	ISVAGVTSGNVGYLAHAIHQVTK	ISVAGVTSGNVGYLAHAIHQVTK	4	ISVAGVTSGNVGYLAHAIHQVTK4	202904	209801	225065
D3ZSC2	D3ZSC2	D3ZSC2_RAT	Pdcd2l	Programmed cell death 2-like	1	ISVCQGQILR	ISVC(UniMod:4)QGQILR	2	ISVC(UniMod:4)QGQILR2	9570.15	17703.8	9910.26
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	ISVEFCHVTR	ISVEFC(UniMod:4)HVTR	3	ISVEFC(UniMod:4)HVTR3	13148.8	13353.8	16236
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	ISVESYQNQVK	ISVESYQNQVK	2	ISVESYQNQVK2	99101.7	102082	90199.5
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	ISVGQASK	ISVGQASK	2	ISVGQASK2	116635	71928.4	102009
Q4FZT8	Q4FZT8	SPRY4_RAT	Spryd4	SPRY domain-containing protein 4	1	ISVIHTLQTDFR	ISVIHTLQTDFR	3	ISVIHTLQTDFR3	5877.19	6242.22	3892.64
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ISVIIER	ISVIIER	2	ISVIIER2	97656.5	71255.3	82045.4
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	ISVINGGSK	ISVINGGSK	2	ISVINGGSK2	727057	760225	767866
Q6Q0N0	Q6Q0N0	CSTN1_RAT	Clstn1	Calsyntenin-1	1	ISVKPTCSPGWQGWSSR	ISVKPTC(UniMod:4)SPGWQGWSSR	3	ISVKPTC(UniMod:4)SPGWQGWSSR3	14257.6	5891.66	29567.8
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	ISVLEALR	ISVLEALR	2	ISVLEALR2	126963	101199	102564
Q5XIT9	Q5XIT9	MCCB_RAT	Mccc2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	1	ISVMGGEQAATVLATVAR	ISVMGGEQAATVLATVAR	2	ISVMGGEQAATVLATVAR2	6138.33	6144.08	4832.87
Q5XIT9	Q5XIT9	MCCB_RAT	Mccc2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	1	ISVMGGEQAATVLATVAR	ISVMGGEQAATVLATVAR	3	ISVMGGEQAATVLATVAR3	7434.46	5406.23	6507.5
P08461	A0A8I6B5J2;P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	0	ISVNDFIIK	ISVNDFIIK	2	ISVNDFIIK2	72056.5	57473.9	60836.6
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	ISVQTPVDQLLQDGLQLR	ISVQTPVDQLLQDGLQLR	3	ISVQTPVDQLLQDGLQLR3		7334.23	
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	ISVREPMQTGIK	ISVREPMQTGIK	3	ISVREPMQTGIK3	75009.8	125272	137655
P28064	P28064	PSB8_RAT	Psmb8	Proteasome subunit beta type-8	1	ISVSAASK	ISVSAASK	1	ISVSAASK1	11341.4	7727.54	7230.67
P28064	P28064	PSB8_RAT	Psmb8	Proteasome subunit beta type-8	1	ISVSAASK	ISVSAASK	2	ISVSAASK2	1.69135e+06	1.57581e+06	1.81973e+06
P97829	P97829	CD47_RAT	Cd47	Leukocyte surface antigen CD47	1	ISVSDLLK	ISVSDLLK	1	ISVSDLLK1	2979.58	1450.81	2985.78
P97829	P97829	CD47_RAT	Cd47	Leukocyte surface antigen CD47	1	ISVSDLLK	ISVSDLLK	2	ISVSDLLK2	2.25648e+06	2.25701e+06	2.24509e+06
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	ISVTNEHSESTLNVLPGK	ISVTNEHSESTLNVLPGK	3	ISVTNEHSESTLNVLPGK3	5512.81	7690.06	5123.82
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	ISVTNEHSESTLNVLPGKK	ISVTNEHSESTLNVLPGKK	3	ISVTNEHSESTLNVLPGKK3	3835.77	4050	
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	ISVTNEHSESTLNVLPGKK	ISVTNEHSESTLNVLPGKK	4	ISVTNEHSESTLNVLPGKK4	13937.1	24313.6	19079.7
F1M798	F1M280;F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	0	ISVTPGEK	ISVTPGEK	2	ISVTPGEK2	120797	110834	111298
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	ISVTVADNASPK	ISVTVADNASPK	2	ISVTVADNASPK2	72954.1	70889	61936.9
A0A0G2JST1	A0A0G2JST1	A0A0G2JST1_RAT	Adgrg6	Adhesion G protein-coupled receptor G6	1	ISVVIHNDLNHPEVR	ISVVIHNDLNHPEVR	3	ISVVIHNDLNHPEVR3	3209.79	4084.74	1878.26
A0A0G2JST1	A0A0G2JST1	A0A0G2JST1_RAT	Adgrg6	Adhesion G protein-coupled receptor G6	1	ISVVIHNDLNHPEVR	ISVVIHNDLNHPEVR	4	ISVVIHNDLNHPEVR4	14804.3	13606.7	
Q4QRB4	Q4QRB4	TBB3_RAT	Tubb3	Tubulin beta-3 chain	1	ISVYYNEASSHK	ISVYYNEASSHK	3	ISVYYNEASSHK3	1064.53	1613.17	1566.74
P69897	P69897	TBB5_RAT	Tubb5	Tubulin beta-5 chain	1	ISVYYNEATGGK	ISVYYNEATGGK	2	ISVYYNEATGGK2	839720	948911	1.0104e+06
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	ISVYYNEAYGK	ISVYYNEAYGK	2	ISVYYNEAYGK2	163829	202307	170021
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	ISVYYNEAYGK	ISVYYNEAYGK	3	ISVYYNEAYGK3	14948.5	12002	12051.4
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	ISVYYNEAYGKK	ISVYYNEAYGKK	2	ISVYYNEAYGKK2	49636.6	73453.1	72060.1
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	ISVYYNEAYGKK	ISVYYNEAYGKK	3	ISVYYNEAYGKK3	404917	588413	609484
Q4QQV0	Q4QQV0	Q4QQV0_RAT	Tubb6	Tubulin beta chain	1	ISVYYNESSSK	ISVYYNESSSK	2	ISVYYNESSSK2	37397.7	36734.5	40591.2
Q4QQV0	Q4QQV0	Q4QQV0_RAT	Tubb6	Tubulin beta chain	1	ISVYYNESSSKK	ISVYYNESSSKK	3	ISVYYNESSSKK3	1620.44	3518.85	
O08775	O08775	VGFR2_RAT	Kdr	Vascular endothelial growth factor receptor 2	1	ISWDSEK	ISWDSEK	2	ISWDSEK2	27102	33851.9	
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	ISWEEYK	ISWEEYK	2	ISWEEYK2	108408	124488	111619
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	ISWIPFMQEK	ISWIPFMQEK	2	ISWIPFMQEK2	29339.3	33706.2	38914.7
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	ISWTTTNR	ISWTTTNR	2	ISWTTTNR2			6901.93
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	ISYAVQGAHEGGIFALCMLR	ISYAVQGAHEGGIFALC(UniMod:4)MLR	3	ISYAVQGAHEGGIFALC(UniMod:4)MLR3	38162.8	25486.6	37145.9
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	ISYDVVK	ISYDVVK	2	ISYDVVK2	113012	72198.4	116088
Q920J4	Q920J4	TXNL1_RAT	Txnl1	Thioredoxin-like protein 1	1	ISYFTFIGTPVQATNMNDFK	ISYFTFIGTPVQATNMNDFK	3	ISYFTFIGTPVQATNMNDFK3	9579.43	11684.7	11358.2
Q920J4	Q920J4	TXNL1_RAT	Txnl1	Thioredoxin-like protein 1	1	ISYFTFIGTPVQATNMNDFKR	ISYFTFIGTPVQATNMNDFKR	3	ISYFTFIGTPVQATNMNDFKR3	43147.4	37260.5	31337.4
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	ISYGNDALMPSLTETK	ISYGNDALMPSLTETK	2	ISYGNDALMPSLTETK2	38936.4	41755.7	42614.4
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	ISYGNDALMPSLTETK	ISYGNDALMPSLTETK	3	ISYGNDALMPSLTETK3	14907.4	18835	15676
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	ISYQLADGGEPQSVQVDGR	ISYQLADGGEPQSVQVDGR	3	ISYQLADGGEPQSVQVDGR3	157782	193441	185784
F1LMI3	F1LMI3	F1LMI3_RAT	Cdh3	Cadherin 3	1	ISYSILR	ISYSILR	2	ISYSILR2	19996.2	16875.1	
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	ISYSNPVR	ISYSNPVR	2	ISYSNPVR2	50095.8	56899.1	45445.4
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	ISYYELTVK	ISYYELTVK	2	ISYYELTVK2	15241.2	8948.94	10899.2
O55012	O55012	PICAL_RAT	Picalm	Phosphatidylinositol-binding clathrin assembly protein	1	ITAAQHSVTGSAVSK	ITAAQHSVTGSAVSK	3	ITAAQHSVTGSAVSK3	96609.9	93535.5	80970.2
B2GV62	B2GV62	B2GV62_RAT	Mrpl20	Mitochondrial ribosomal protein L20	1	ITAASQEHGLQYPAFILNLVK	ITAASQEHGLQYPAFILNLVK	3	ITAASQEHGLQYPAFILNLVK3	3026.34	4236.51	
P11730	P11730	KCC2G_RAT	Camk2g	Calcium/calmodulin-dependent protein kinase type II subunit gamma	1	ITADQALK	ITADQALK	2	ITADQALK2	35448.7	46502.1	41610.6
A0A0G2JVY4	A0A0G2JVY4	A0A0G2JVY4_RAT	Tmem63a	Transmembrane protein 63a	1	ITAEECR	ITAEEC(UniMod:4)R	2	ITAEEC(UniMod:4)R2	15267.5		14475.9
F1LRE5	F1LRE5	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	1	ITAEIFSPNDK	ITAEIFSPNDK	2	ITAEIFSPNDK2	8912.65	18675.4	11957.6
F1LRE5	F1LRE5	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	1	ITAEIFSPNDKK	ITAEIFSPNDKK	3	ITAEIFSPNDKK3	15296.8	20699.8	16123.7
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	ITAETLYMSHR	ITAETLYMSHR	2	ITAETLYMSHR2	45349	34748.2	33388.7
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	ITAETLYMSHR	ITAETLYMSHR	3	ITAETLYMSHR3	517381	481937	515406
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	ITAFVVER	ITAFVVER	2	ITAFVVER2	64810.9	52023.7	69419.5
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	ITAGLDMK	ITAGLDMK	2	ITAGLDMK2	432690	430779	439050
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	ITAGSAPVSMASVTIHIPLHTK	ITAGSAPVSMASVTIHIPLHTK	3	ITAGSAPVSMASVTIHIPLHTK3	12226	12454.8	12439.3
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	ITAGSAPVSMASVTIHIPLHTK	ITAGSAPVSMASVTIHIPLHTK	4	ITAGSAPVSMASVTIHIPLHTK4	84185.4	75880.6	79680.8
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	ITAHLVHELR	ITAHLVHELR	2	ITAHLVHELR2	1524.04	3948.47	2626.64
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	ITAHLVHELR	ITAHLVHELR	3	ITAHLVHELR3	84718.3	64849.1	64725.9
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	ITALDEFATK	ITALDEFATK	2	ITALDEFATK2	751881	769484	773161
A0A0G2K8I5	A0A0G2K8I5	A0A0G2K8I5_RAT	Pcdh19	Protocadherin 19	1	ITALDGGDPPHMGTVGLTIK	ITALDGGDPPHMGTVGLTIK	3	ITALDGGDPPHMGTVGLTIK3	15827.4	11535.9	
D3ZFK6	D3ZFK6	D3ZFK6_RAT	Atg16l1	Autophagy related 16-like 1	1	ITALDLNPER	ITALDLNPER	2	ITALDLNPER2	23878.6	14181.1	16225.6
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	ITALEDISTEDGDRLYSLCK	ITALEDISTEDGDRLYSLC(UniMod:4)K	3	ITALEDISTEDGDRLYSLC(UniMod:4)K3		9380.89	
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	ITALMVSCNR	ITALMVSC(UniMod:4)NR	2	ITALMVSC(UniMod:4)NR2	13286	14769.1	10953.7
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	ITANLFR	ITANLFR	2	ITANLFR2	54078.6	90955.8	124783
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	ITAQGQYELR	ITAQGQYELR	2	ITAQGQYELR2	321702	384533	347402
P17425	P17425	HMCS1_RAT	Hmgcs1	Hydroxymethylglutaryl-CoA synthase, cytoplasmic	1	ITASLCDLK	ITASLC(UniMod:4)DLK	2	ITASLC(UniMod:4)DLK2	19578.8	17517.9	25918.4
O35964	O35964	SH3G1_RAT	Sh3gl1	Endophilin-A2	1	ITASSSFR	ITASSSFR	2	ITASSSFR2	156345	145769	108330
F1LYX9	F1LYX9	F1LYX9_RAT	Dsg2	Desmoglein 2	1	ITATDADDPQTLNSK	ITATDADDPQTLNSK	2	ITATDADDPQTLNSK2	76699.4	56473.9	51286.4
A0A8I5ZVI9	A0A8I5ZVI9	A0A8I5ZVI9_RAT	Ranbp3	RAN binding protein 3	1	ITATDAEDQGVK	ITATDAEDQGVK	2	ITATDAEDQGVK2	28221.7	34720.6	29925.3
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	ITCLCQVPQNAANR	ITC(UniMod:4)LC(UniMod:4)QVPQNAANR	2	ITC(UniMod:4)LC(UniMod:4)QVPQNAANR2	20237.6	16512	
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	ITCLCQVPQNAANR	ITC(UniMod:4)LC(UniMod:4)QVPQNAANR	3	ITC(UniMod:4)LC(UniMod:4)QVPQNAANR3	7926.98	17198	8513.98
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	ITCMNPSAYQR	ITC(UniMod:4)MNPSAYQR	2	ITC(UniMod:4)MNPSAYQR2	23530.9	37572	25246.6
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	ITCPPPPIPK	ITC(UniMod:4)PPPPIPK	2	ITC(UniMod:4)PPPPIPK2	3.47953e+06	3.13181e+06	3.755e+06
A0A0G2K975	A0A0G2K975	A0A0G2K975_RAT	Cfhr4	Similar to complement factor H-related protein	1	ITCSQPPK	ITC(UniMod:4)SQPPK	2	ITC(UniMod:4)SQPPK2	19760		32487.3
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	ITCTDPNTYK	ITC(UniMod:4)TDPNTYK	2	ITC(UniMod:4)TDPNTYK2	19517.9	15084.3	16552.3
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	ITCVETVVPEK	ITC(UniMod:4)VETVVPEK	2	ITC(UniMod:4)VETVVPEK2	47488.9	44184.1	32276.4
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	ITCVETVVPEKNPPPER	ITC(UniMod:4)VETVVPEKNPPPER	3	ITC(UniMod:4)VETVVPEKNPPPER3	74848.5	53361	59670.7
Q66H86	Q66H86	OLFL1_RAT	Olfml1	Olfactomedin-like protein 1	1	ITCVYDPLGTVR	ITC(UniMod:4)VYDPLGTVR	2	ITC(UniMod:4)VYDPLGTVR2	70914.5	56106	52608.8
Q66H86	Q66H86	OLFL1_RAT	Olfml1	Olfactomedin-like protein 1	1	ITCVYDPLGTVREEHLPNLFFPR	ITC(UniMod:4)VYDPLGTVREEHLPNLFFPR	3	ITC(UniMod:4)VYDPLGTVREEHLPNLFFPR3		2704.29	7411.44
Q66H86	Q66H86	OLFL1_RAT	Olfml1	Olfactomedin-like protein 1	1	ITCVYDPLGTVREEHLPNLFFPR	ITC(UniMod:4)VYDPLGTVREEHLPNLFFPR	4	ITC(UniMod:4)VYDPLGTVREEHLPNLFFPR4	10458.9	9998.29	9045.23
Q63616	Q63616	VP33B_RAT	Vps33b	Vacuolar protein sorting-associated protein 33B	1	ITDAFSSLAK	ITDAFSSLAK	2	ITDAFSSLAK2	33714.7	29864.5	21187.9
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	ITDDMDQVELK	ITDDMDQVELK	2	ITDDMDQVELK2	148554	147528	145603
Q63484	P47196;Q63484	AKT3_RAT	Akt3	RAC-gamma serine/threonine-protein kinase	0	ITDFGLCK	ITDFGLC(UniMod:4)K	2	ITDFGLC(UniMod:4)K2	20821.7		19886.5
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	ITDFSFSDFELSDLETALCTIR	ITDFSFSDFELSDLETALC(UniMod:4)TIR	3	ITDFSFSDFELSDLETALC(UniMod:4)TIR3	20833.1	14110	8877.98
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	ITDGNEISTGNMVSSIDSEK	ITDGNEISTGNMVSSIDSEK	3	ITDGNEISTGNMVSSIDSEK3	42108.3	45347.1	62912.7
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	ITDGTMLQAIER	ITDGTMLQAIER	2	ITDGTMLQAIER2	88216.9	117845	106549
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	ITDIIGKEEGLGAENLR	ITDIIGKEEGLGAENLR	3	ITDIIGKEEGLGAENLR3	7488.45	5893.02	6866.4
A0A1W2Q5Z7	A0A1W2Q5Z7	A0A1W2Q5Z7_RAT	St3gal1	ST3 beta-galactoside alpha-2,3-sialyltransferase 1	1	ITDLQWVISATTTGTITHTYVPVPPK	ITDLQWVISATTTGTITHTYVPVPPK	3	ITDLQWVISATTTGTITHTYVPVPPK3	17533.9	20263.1	27775.7
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	ITDLYTDLR	ITDLYTDLR	2	ITDLYTDLR2	1.0378e+06	1.14458e+06	1.04893e+06
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	ITDLYTDLRDGR	ITDLYTDLRDGR	3	ITDLYTDLRDGR3	206645	330624	324993
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ITDNDVLIALDSAK	ITDNDVLIALDSAK	2	ITDNDVLIALDSAK2	1.08215e+06	1.25756e+06	1.28179e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ITDNDVLIALDSAK	ITDNDVLIALDSAK	3	ITDNDVLIALDSAK3	337295	423023	391936
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	ITDNELELYK	ITDNELELYK	2	ITDNELELYK2	73566.9	67323.7	59300.2
P18292	P18292	THRB_RAT	F2	Prothrombin	1	ITDNMFCAGFK	ITDNMFC(UniMod:4)AGFK	2	ITDNMFC(UniMod:4)AGFK2	141653	182375	180636
P18292	P18292	THRB_RAT	F2	Prothrombin	1	ITDNMFCAGFK	ITDNMFC(UniMod:4)AGFK	3	ITDNMFC(UniMod:4)AGFK3	980792	1.11161e+06	1.11598e+06
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	ITDNPEGK	ITDNPEGK	1	ITDNPEGK1	73762.3	78604.1	76959.5
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	ITDNPEGK	ITDNPEGK	2	ITDNPEGK2	2.42998e+06		2.55152e+06
Q63584	Q63584	TMEDA_RAT	Tmed10	Transmembrane emp24 domain-containing protein 10	1	ITDSAGHILYAK	ITDSAGHILYAK	2	ITDSAGHILYAK2	29643.2	35422.3	20885.2
Q63584	Q63584	TMEDA_RAT	Tmed10	Transmembrane emp24 domain-containing protein 10	1	ITDSAGHILYAK	ITDSAGHILYAK	3	ITDSAGHILYAK3	72905.3	48929.2	66959.2
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	ITDSPSVR	ITDSPSVR	2	ITDSPSVR2	9929.64	12403.9	
A0A8I6GK59	A0A8I6GK59	A0A8I6GK59_RAT	Bmp2k	BMP-2 inducible kinase	1	ITDTIGPTETSIAPR	ITDTIGPTETSIAPR	2	ITDTIGPTETSIAPR2	12779.7	13396	11195.8
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	ITDVIIGFQACCR	ITDVIIGFQAC(UniMod:4)C(UniMod:4)R	2	ITDVIIGFQAC(UniMod:4)C(UniMod:4)R2	2.33355e+06	3.56784e+06	2.69776e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	ITDVIIGFQACCR	ITDVIIGFQAC(UniMod:4)C(UniMod:4)R	3	ITDVIIGFQAC(UniMod:4)C(UniMod:4)R3	170253	174753	135171
F1LR42	F1LR42	F1LR42_RAT	Rufy1	RUN and FYVE domain containing 1	1	ITDVLDQK	ITDVLDQK	2	ITDVLDQK2	7990.48	9443.38	6928.71
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	ITDWILQDK	ITDWILQDK	2	ITDWILQDK2	29950.2	23183.9	16837.4
P27139	P27139	CAH2_RAT	Ca2	Carbonic anhydrase 2	1	ITEALHSIK	ITEALHSIK	2	ITEALHSIK2	6741.99	2768.06	
Q9QWG5	Q9QWG5	INP4B_RAT	Inpp4b	Type II inositol 3,4-bisphosphate 4-phosphatase	1	ITEATSNDVLPVLTGR	ITEATSNDVLPVLTGR	2	ITEATSNDVLPVLTGR2	2472.87		4881.25
A0A8I6A6I4	A0A8I6A6I4	A0A8I6A6I4_RAT	Atp11b	Phospholipid-transporting ATPase	1	ITEDHVIQHGLVVDGTSLSLALR	ITEDHVIQHGLVVDGTSLSLALR	4	ITEDHVIQHGLVVDGTSLSLALR4	10451.9	6056.82	3632.13
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	ITEDTVEFGS	ITEDTVEFGS	2	ITEDTVEFGS2	8576.09		5427.13
Q4KLL4	Q4KLL4	TM9S4_RAT	Tm9sf4	Transmembrane 9 superfamily member 4	1	ITEEYYVHLIADNLPVATR	ITEEYYVHLIADNLPVATR	3	ITEEYYVHLIADNLPVATR3	43860.1	32384.3	35519.6
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	ITEIIPVTGPR	ITEIIPVTGPR	2	ITEIIPVTGPR2	110300	105507	142449
P15651	P15651	ACADS_RAT	Acads	Short-chain specific acyl-CoA dehydrogenase, mitochondrial	1	ITEIYEGTSEIQR	ITEIYEGTSEIQR	2	ITEIYEGTSEIQR2	24311.2	15592.3	21194.1
A0A8I6AS97	A0A8I6AS97	A0A8I6AS97_RAT	Pfdn4	Prefoldin subunit 4	1	ITELKEEIEVK	ITELKEEIEVK	3	ITELKEEIEVK3	19129.9	12658.4	20319.3
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	ITELLNDVER	ITELLNDVER	2	ITELLNDVER2	45582	60038.7	59081.1
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	ITELMQVLK	ITELMQVLK	2	ITELMQVLK2	87309.9	65357.9	80659.1
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	ITEMPGIIK	ITEMPGIIK	2	ITEMPGIIK2	29547.8	28577.7	31172.4
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	ITENIGCVMTGMTADSR	ITENIGC(UniMod:4)VMTGMTADSR	2	ITENIGC(UniMod:4)VMTGMTADSR2	1.14624e+06	1.23625e+06	1.30028e+06
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	ITENIGCVMTGMTADSR	ITENIGC(UniMod:4)VMTGMTADSR	3	ITENIGC(UniMod:4)VMTGMTADSR3	598741	655523	737948
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	ITENMFCAGYMDGTK	ITENMFC(UniMod:4)AGYMDGTK	2	ITENMFC(UniMod:4)AGYMDGTK2	18822.8	10922.7	16236.3
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	ITENMFCAGYMDGTK	ITENMFC(UniMod:4)AGYMDGTK	3	ITENMFC(UniMod:4)AGYMDGTK3	98669.9	104563	129731
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	ITENTLEHELK	ITENTLEHELK	2	ITENTLEHELK2		11424.1	3860.87
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	ITENTLEHELK	ITENTLEHELK	3	ITENTLEHELK3	241115	295690	254827
P11730	P11730	KCC2G_RAT	Camk2g	Calcium/calmodulin-dependent protein kinase type II subunit gamma	1	ITEQLIEAINNGDFEAYTK	ITEQLIEAINNGDFEAYTK	3	ITEQLIEAINNGDFEAYTK3	7362.85		8105.86
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	ITESEEVVSR	ITESEEVVSR	2	ITESEEVVSR2	46183.6	42883.9	44563.6
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	ITESSIVENLK	ITESSIVENLK	2	ITESSIVENLK2	44745	50604.5	44406.4
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	ITESSIVENLKK	ITESSIVENLKK	2	ITESSIVENLKK2	1986.96	2776.69	2209.74
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	ITESSIVENLKK	ITESSIVENLKK	3	ITESSIVENLKK3	29350	30987	41264.6
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	ITESVTETAQTIK	ITESVTETAQTIK	2	ITESVTETAQTIK2	78014.2	86790.4	84680.3
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	ITESVTETAQTIKK	ITESVTETAQTIKK	3	ITESVTETAQTIKK3	37658.6	41176.4	37258
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	ITEVLVR	ITEVLVR	2	ITEVLVR2	122069	146299	133852
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ITEVSVVGHVSYDK	ITEVSVVGHVSYDK	2	ITEVSVVGHVSYDK2	84038.6	71459.2	60088.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ITEVSVVGHVSYDK	ITEVSVVGHVSYDK	3	ITEVSVVGHVSYDK3	184109	201025	185867
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ITEVSVVGHVSYDKK	ITEVSVVGHVSYDKK	3	ITEVSVVGHVSYDKK3	19239.1	10154.6	11998.8
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	ITEVSVVGHVSYDKK	ITEVSVVGHVSYDKK	4	ITEVSVVGHVSYDKK4	29111.2	27135.5	49355.5
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	ITEVWGIPSPIDTVFTR	ITEVWGIPSPIDTVFTR	2	ITEVWGIPSPIDTVFTR2	506740	506695	483920
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	ITEVWGIPSPIDTVFTR	ITEVWGIPSPIDTVFTR	3	ITEVWGIPSPIDTVFTR3	62612.3	68016	72773.6
P62944	P52303;P62944	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	ITEYLCEPLR	ITEYLC(UniMod:4)EPLR	2	ITEYLC(UniMod:4)EPLR2	39120	22797.1	31039.2
P62944	P52303;P62944	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	ITEYLCEPLRK	ITEYLC(UniMod:4)EPLRK	2	ITEYLC(UniMod:4)EPLRK2	9667.98	6072.78	8059.07
P62944	P52303;P62944	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	ITEYLCEPLRK	ITEYLC(UniMod:4)EPLRK	3	ITEYLC(UniMod:4)EPLRK3	162192	173064	182099
O88321	O88321	O88321_RAT	Psmd4	26S proteasome non-ATPase regulatory subunit 4	1	ITFCTGIR	ITFC(UniMod:4)TGIR	2	ITFC(UniMod:4)TGIR2	125931	155807	120931
A0A8I6A263	A0A8I6A263	A0A8I6A263_RAT	Aimp1	Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	1	ITFDAFPGEPDKELNPK	ITFDAFPGEPDKELNPK	2	ITFDAFPGEPDKELNPK2	5430.91	7739.34	
A0A8I6A263	A0A8I6A263	A0A8I6A263_RAT	Aimp1	Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	1	ITFDAFPGEPDKELNPK	ITFDAFPGEPDKELNPK	3	ITFDAFPGEPDKELNPK3	103630	107021	125548
A0A8I5Y9M9	A0A8I5Y9M9	A0A8I5Y9M9_RAT	Sri	Sorcin	1	ITFDDYIACCVK	ITFDDYIAC(UniMod:4)C(UniMod:4)VK	2	ITFDDYIAC(UniMod:4)C(UniMod:4)VK2	39917.2	45672	27897.1
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	ITFDVAPSR	ITFDVAPSR	2	ITFDVAPSR2	58286.4	51640.5	59433.1
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	ITFEINPLDETVSQR	ITFEINPLDETVSQR	2	ITFEINPLDETVSQR2	71192.4	69877	58060.4
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	ITFEINPLDETVSQR	ITFEINPLDETVSQR	3	ITFEINPLDETVSQR3	15075.3	18343.8	18247.1
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	ITFGFISCPICK	ITFGFISC(UniMod:4)PIC(UniMod:4)K	2	ITFGFISC(UniMod:4)PIC(UniMod:4)K2	27037.1	20428.6	27350.6
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	ITFGNVNGCSTAEER	ITFGNVNGC(UniMod:4)STAEER	2	ITFGNVNGC(UniMod:4)STAEER2	2394.52	2746.03	7092.35
P63036	P63036	DNJA1_RAT	Dnaja1	DnaJ homolog subfamily A member 1	1	ITFHGEGDQEPGLEPGDIIIVLDQK	ITFHGEGDQEPGLEPGDIIIVLDQK	3	ITFHGEGDQEPGLEPGDIIIVLDQK3	35400	61742.2	51240.3
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	ITFLLQAIR	ITFLLQAIR	2	ITFLLQAIR2	165173	244967	196496
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	ITFPCISDMIK	ITFPC(UniMod:4)ISDMIK	2	ITFPC(UniMod:4)ISDMIK2	1.26394e+06	1.33625e+06	1.42381e+06
Q497B0	Q497B0	NIT2_RAT	Nit2	Omega-amidase NIT2	1	ITFQESK	ITFQESK	2	ITFQESK2	74702.5	67521.7	62636.5
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	ITFRPDSADGMLLYNGQK	ITFRPDSADGMLLYNGQK	3	ITFRPDSADGMLLYNGQK3	9855.32		10386.6
Q9ESC1	Q9ESC1	AGRL4_RAT	Adgrl4	Adhesion G protein-coupled receptor L4	1	ITFTLSHVK	ITFTLSHVK	2	ITFTLSHVK2	21502	20722.3	12842.2
Q63556	Q63556	SPA3M_RAT	Serpina3m	Serine protease inhibitor A3M (Fragment)	1	ITGAKDLSVSQVVHK	ITGAKDLSVSQVVHK	4	ITGAKDLSVSQVVHK4	12529.7	12593.2	11724.3
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	ITGAQTLPK	ITGAQTLPK	2	ITGAQTLPK2	51140.5	43364.7	37532
Q5U2R9	Q5U2R9	Q5U2R9_RAT	Scfd2	Sec1 family domain containing 2	1	ITGCDSAIDLTLPK	ITGC(UniMod:4)DSAIDLTLPK	2	ITGC(UniMod:4)DSAIDLTLPK2	4654.33	4039.49	5412.13
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	ITGCTSPGK	ITGC(UniMod:4)TSPGK	2	ITGC(UniMod:4)TSPGK2			195499
D3ZYR1	D3ZYR1	FCHO2_RAT	Fcho2	F-BAR domain only protein 2	1	ITGDVTISFPSGIIK	ITGDVTISFPSGIIK	2	ITGDVTISFPSGIIK2	8387	13883.1	10460.6
Q62885	Q62885	U119A_RAT	Unc119	Protein unc-119 homolog A	1	ITGDYLCSPEENIYK	ITGDYLC(UniMod:4)SPEENIYK	2	ITGDYLC(UniMod:4)SPEENIYK2	2712.73	3337.48	5717.73
Q794E4	Q794E4;A0A8I5ZW75	HNRPF_RAT	Hnrnpf	Heterogeneous nuclear ribonucleoprotein F	0	ITGEAFVQFASQELAEK	ITGEAFVQFASQELAEK	3	ITGEAFVQFASQELAEK3	16780.5	10800.1	6802.44
Q04589	Q04589	FGFR1_RAT	Fgfr1	Fibroblast growth factor receptor 1	1	ITGEEVEVR	ITGEEVEVR	2	ITGEEVEVR2	164493	174159	141230
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	ITGEIMHALK	ITGEIMHALK	2	ITGEIMHALK2	59005.5	38977.3	31938.2
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	ITGFNIWDR	ITGFNIWDR	2	ITGFNIWDR2	425574	873411	559472
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	ITGIEPLPGENK	ITGIEPLPGENK	2	ITGIEPLPGENK2	171555	227229	206023
P97535	P97535	PLA1A_RAT	Pla1a	Phospholipase A1 member A	1	ITGLDPAGPEYTR	ITGLDPAGPEYTR	2	ITGLDPAGPEYTR2	348470	304468	356241
P07867	P07867	LIPC_RAT	Lipc	Hepatic triacylglycerol lipase	1	ITGLDPAGPMFEGTSPNER	ITGLDPAGPMFEGTSPNER	3	ITGLDPAGPMFEGTSPNER3	35068.2	45566.8	27244.8
Q8VBX1	Q8VBX1	LIPE_RAT	Lipg	Endothelial lipase	1	ITGLDPAGPMFEGVDINRR	ITGLDPAGPMFEGVDINRR	3	ITGLDPAGPMFEGVDINRR3	9972.93	9580.22	20328.2
Q06000	Q06000	LIPL_RAT	Lpl	Lipoprotein lipase	1	ITGLDPAGPNFEYAEAPSR	ITGLDPAGPNFEYAEAPSR	3	ITGLDPAGPNFEYAEAPSR3	42720.4	41702.5	51393.6
Q9EPH8	D3ZSR2;Q9EPH8;G3V9N0	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	0	ITGMLLEIDNSELLHMLESPESLR	ITGMLLEIDNSELLHMLESPESLR	3	ITGMLLEIDNSELLHMLESPESLR3		4568.04	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	ITGQLESLECR	ITGQLESLEC(UniMod:4)R	2	ITGQLESLEC(UniMod:4)R2	49132.1	59562.5	63852.3
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	ITGRPPPQVTWLK	ITGRPPPQVTWLK	3	ITGRPPPQVTWLK3	86491	96900.9	111080
Q9EQT5	Q9EQT5	TINAL_RAT	Tinagl1	Tubulointerstitial nephritis antigen-like	1	ITGWGEETLPDGR	ITGWGEETLPDGR	2	ITGWGEETLPDGR2	16693.9	11159.1	19150.7
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	ITGYIIK	ITGYIIK	1	ITGYIIK1	1.66742e+06	1.72071e+06	1.56304e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	ITGYIIK	ITGYIIK	2	ITGYIIK2	5.23693e+07	198681	6.37217e+07
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	ITGYIIKYEKPGSPPR	ITGYIIKYEKPGSPPR	4	ITGYIIKYEKPGSPPR4	18942.8	18926.7	14454.5
A0A8I5YCH6	A0A8I5YCH6	A0A8I5YCH6_RAT	Aaas	Aladin WD repeat nucleoporin	1	ITHIPLYFVNAQFPR	ITHIPLYFVNAQFPR	3	ITHIPLYFVNAQFPR3	9690.86	4034.49	8522.94
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	ITHLVPGTFSQLESMK	ITHLVPGTFSQLESMK	2	ITHLVPGTFSQLESMK2	13872.7	9098.82	6582.31
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	ITHLVPGTFSQLESMK	ITHLVPGTFSQLESMK	3	ITHLVPGTFSQLESMK3	87558.8	83590.3	88175.5
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	ITHLVPGTFSQLESMKR	ITHLVPGTFSQLESMKR	4	ITHLVPGTFSQLESMKR4	5318.92		
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	ITHPVYSLYFPEEK	ITHPVYSLYFPEEK	3	ITHPVYSLYFPEEK3	14241.4	20810.4	16882.2
F1LYX9	F1LYX9	F1LYX9_RAT	Dsg2	Desmoglein 2	1	ITHQESTSVLLQPSER	ITHQESTSVLLQPSER	3	ITHQESTSVLLQPSER3	71141	48393.3	54438.7
P08650	P08650	CO5_RAT	C5	Complement C5	1	ITHYNYLILSK	ITHYNYLILSK	2	ITHYNYLILSK2	19868.9	14244.7	13168.1
P08650	P08650	CO5_RAT	C5	Complement C5	1	ITHYNYLILSK	ITHYNYLILSK	3	ITHYNYLILSK3	73052	44315.4	34203
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	ITHYQLNFQTGLLVPAHIFR	ITHYQLNFQTGLLVPAHIFR	3	ITHYQLNFQTGLLVPAHIFR3	30327.1	25606.9	23285.9
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	ITHYQLNFQTGLLVPAHIFR	ITHYQLNFQTGLLVPAHIFR	4	ITHYQLNFQTGLLVPAHIFR4	76543.5	97656.1	77458.8
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	ITIATGQVAGTSK	ITIATGQVAGTSK	2	ITIATGQVAGTSK2	117074	123796	119680
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	ITIEILK	ITIEILK	2	ITIEILK2	12522.9	15639	7550.51
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	ITIFGDEGVPVQVDGEAWVQPPGIIK	ITIFGDEGVPVQVDGEAWVQPPGIIK	3	ITIFGDEGVPVQVDGEAWVQPPGIIK3	44084.2	40693.1	37223.1
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	ITIGQAPTEK	ITIGQAPTEK	2	ITIGQAPTEK2	84605.6	78831.2	66133.9
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	ITIGQGSTEK	ITIGQGSTEK	2	ITIGQGSTEK2	31990.5	23459.2	59167.5
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	ITIHEYDSITDSSR	ITIHEYDSITDSSR	3	ITIHEYDSITDSSR3	5524.94	14242	10134
Q8CG09	A0A0G2K5H6;Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	0	ITIIPQDPVLFSGSLR	ITIIPQDPVLFSGSLR	2	ITIIPQDPVLFSGSLR2	39287	37543.3	21429.6
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	ITILVTHQLQYLK	ITILVTHQLQYLK	3	ITILVTHQLQYLK3	3942.51	14935.8	6376.71
P58751	P58751	RELN_RAT	Reln	Reelin	1	ITIQLPDHVSSSATQFR	ITIQLPDHVSSSATQFR	3	ITIQLPDHVSSSATQFR3	84088.2	83640.2	72695.1
P10111	P10111;A0A8I6A629	PPIA_RAT	Ppia	Peptidyl-prolyl cis-trans isomerase A	0	ITISDCGQL	ITISDC(UniMod:4)GQL	2	ITISDC(UniMod:4)GQL2	73279.2	67633.9	58512.9
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	ITITGFR	ITITGFR	2	ITITGFR2	35108.6	40706.3	54584.7
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	ITITHPR	ITITHPR	2	ITITHPR2	67928.3	61548.7	57725.9
P14659	P0DMW0;P0DMW1;P55063;P14659;A0A8I6AQL9;P63018;M0RCB1	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	0	ITITNDK	ITITNDK	1	ITITNDK1	20692.7	12415.8	24497.9
P14659	P0DMW0;P0DMW1;P55063;P14659;A0A8I6AQL9;P63018;M0RCB1	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	0	ITITNDK	ITITNDK	2	ITITNDK2	2.38302e+06	1.9743e+06	2.54206e+06
P14659	P0DMW0;P0DMW1;P55063;P14659;A0A8I6AQL9;P63018;M0RCB1	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	0	ITITNDKGR	ITITNDKGR	2	ITITNDKGR2	58797.4	56784.3	73449.3
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	ITITNDQNR	ITITNDQNR	2	ITITNDQNR2	4.95645e+06	5.11027e+06	5.11415e+06
Q7TSE9	Q7TSE9	HAX1_RAT	Hax1	HCLS1-associated protein X-1	1	ITKPDGTVEEHR	ITKPDGTVEEHR	3	ITKPDGTVEEHR3	4269.24	6462.09	
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	ITKPGSIDSNNQLFAPGGR	ITKPGSIDSNNQLFAPGGR	3	ITKPGSIDSNNQLFAPGGR3	340451	347540	362220
P20909	P20909	COBA1_RAT	Col11a1	Collagen alpha-1(XI) chain	1	ITKPLDR	ITKPLDR	2	ITKPLDR2	29876.1	36609.4	33024.6
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	ITKYPVLINR	ITKYPVLINR	2	ITKYPVLINR2	7232.99		8445.54
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	ITKYPVLINR	ITKYPVLINR	3	ITKYPVLINR3	30012.4	33520.1	44624.1
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	ITLAAFK	ITLAAFK	2	ITLAAFK2	31334.9	18549.2	17721.9
P11980	A0A8I6AKN1;M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	ITLDNAYMEK	ITLDNAYMEK	2	ITLDNAYMEK2	516003	501982	472407
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	ITLEDVISHSK	ITLEDVISHSK	3	ITLEDVISHSK3	75159.3	68959.1	54279.9
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	ITLEGPTEDVNVAQEQIEGMVK	ITLEGPTEDVNVAQEQIEGMVK	3	ITLEGPTEDVNVAQEQIEGMVK3	4517.73	11850.6	13164.6
Q6U6G5	Q6U6G5;D4AA59	ZC3HF_RAT	Zc3h15	Zinc finger CCCH domain-containing protein 15	0	ITLESFLAWK	ITLESFLAWK	2	ITLESFLAWK2	10169.4	14942.8	8877.66
A0A8I6AUQ7	A0A8I6AUQ7	A0A8I6AUQ7_RAT	Zpr1	ZPR1 zinc finger	1	ITLHITDPSDMTR	ITLHITDPSDMTR	3	ITLHITDPSDMTR3	7797.34	9914.78	11201
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	ITLLEAQNR	ITLLEAQNR	2	ITLLEAQNR2	43820.2	45753.7	45492.7
D3ZD47	D3ZD47	D3ZD47_RAT	Ctif	CBP80/20-dependent translation initiation factor	1	ITLLQSSK	ITLLQSSK	2	ITLLQSSK2	5063.2	7117.46	7844.76
A0A8I6A2A6	A0A8I6A2A6	A0A8I6A2A6_RAT	Spata5	Spermatogenesis associated 5	1	ITLNDFLQGMNDIRPSAMR	ITLNDFLQGMNDIRPSAMR	3	ITLNDFLQGMNDIRPSAMR3	7638.11		
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	ITLPAPNPDHVGGYK	ITLPAPNPDHVGGYK	2	ITLPAPNPDHVGGYK2	16838.8	8553.94	8717
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	ITLPAPNPDHVGGYK	ITLPAPNPDHVGGYK	3	ITLPAPNPDHVGGYK3	188427	173979	176324
Q63313	Q63313	LBP_RAT	Lbp	Lipopolysaccharide-binding protein	1	ITLPDFSGDFK	ITLPDFSGDFK	2	ITLPDFSGDFK2	63405.2	60603.1	61475
P58751	P58751	RELN_RAT	Reln	Reelin	1	ITLPLPAYTR	ITLPLPAYTR	2	ITLPLPAYTR2	502034	533910	586931
F1M8V2	F1M8V2	F1M8V2_RAT	Ube4b	Ubiquitin conjugation factor E4	1	ITLPNDETR	ITLPNDETR	2	ITLPNDETR2	23203.5	29660.2	13523.7
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	ITLPPSLPGPVVLGTPFR	ITLPPSLPGPVVLGTPFR	2	ITLPPSLPGPVVLGTPFR2	36278	43095.8	49394.4
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	ITLPPSLPGPVVLGTPFR	ITLPPSLPGPVVLGTPFR	3	ITLPPSLPGPVVLGTPFR3	19868.2	13707.7	6134.2
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	ITLPSIGR	ITLPSIGR	2	ITLPSIGR2	43592.5	51797.4	46112
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	ITLPSINR	ITLPSINR	2	ITLPSINR2	87960.3	68333.6	78061.9
P16617	P16617;M0R6Y8	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	0	ITLPVDFVTADK	ITLPVDFVTADK	2	ITLPVDFVTADK2	328956	269899	329238
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	ITLQDVVSHSK	ITLQDVVSHSK	2	ITLQDVVSHSK2	8465.54	22617.6	4887.43
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	ITLQDVVSHSK	ITLQDVVSHSK	3	ITLQDVVSHSK3	68945.2	81918.8	59763.7
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	ITLQEMLK	ITLQEMLK	2	ITLQEMLK2	13897.4	17475.9	17267.4
P02600	P02600	MYL1_RAT	Myl1	Myosin light chain 1/3, skeletal muscle isoform	1	ITLSQVGDVLR	ITLSQVGDVLR	2	ITLSQVGDVLR2	10082.7	5063.1	6698.66
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	ITLTCGR	ITLTC(UniMod:4)GR	2	ITLTC(UniMod:4)GR2	444827	451952	492822
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	ITLTHTLYDVK	ITLTHTLYDVK	2	ITLTHTLYDVK2	4017.94	7433.74	
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	ITLTHTLYDVK	ITLTHTLYDVK	3	ITLTHTLYDVK3	18799.1	18826.3	16847.1
Q5BJP3	Q5BJP3	UFM1_RAT	Ufm1	Ubiquitin-fold modifier 1	1	ITLTSDPR	ITLTSDPR	2	ITLTSDPR2	52687.9	49392.6	58731.6
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	ITLVSSGSGTMGAAK	ITLVSSGSGTMGAAK	2	ITLVSSGSGTMGAAK2	8948.51	11607.5	15099.6
D3ZF32	D3ZF32	D3ZF32_RAT	Treml2	Triggering receptor expressed on myeloid cells-like 2	1	ITMEALR	ITMEALR	2	ITMEALR2	84390.4	82512.1	94170.2
D4A482	D4A482	D4A482_RAT	Mfsd2b	Major facilitator superfamily domain containing 2B	1	ITMEMAGTLMGATVHGLIVSSAHGSHR	ITMEMAGTLMGATVHGLIVSSAHGSHR	4	ITMEMAGTLMGATVHGLIVSSAHGSHR4	30187.4	17889.2	30170.2
P10252	P10252	CD48_RAT	Cd48	CD48 antigen	1	ITMEVYDLVSK	ITMEVYDLVSK	2	ITMEVYDLVSK2	59298.5	42566.7	42236.4
P10252	P10252	CD48_RAT	Cd48	CD48 antigen	1	ITMEVYDLVSKPAIK	ITMEVYDLVSKPAIK	2	ITMEVYDLVSKPAIK2	32115.8	24405.2	33654.6
P10252	P10252	CD48_RAT	Cd48	CD48 antigen	1	ITMEVYDLVSKPAIK	ITMEVYDLVSKPAIK	3	ITMEVYDLVSKPAIK3	1.05389e+06	995621	1.23198e+06
F1LM66	F1LM66	F1LM66_RAT	Eftud2	116 kDa U5 small nuclear ribonucleoprotein component	1	ITMIAEPLEK	ITMIAEPLEK	2	ITMIAEPLEK2	12023.2	14807	6408.61
D3ZS41	D3ZS41	D3ZS41_RAT	Ecm2	Extracellular matrix protein 2	1	ITMIVLR	ITMIVLR	2	ITMIVLR2	10535.4	10959.9	8123.89
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	ITMPVIFNEPLSFLQR	ITMPVIFNEPLSFLQR	2	ITMPVIFNEPLSFLQR2	12180.1	16335.4	13957.4
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	ITMPVIFNEPLSFLQR	ITMPVIFNEPLSFLQR	3	ITMPVIFNEPLSFLQR3	7874.77	5917.86	6170.68
Q6IFV4	Q63279;Q6IFV4	K1C13_RAT	Krt13	Keratin, type I cytoskeletal 13	0	ITMQNLNDR	ITMQNLNDR	2	ITMQNLNDR2		39710.5	
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	ITNANELK	ITNANELK	2	ITNANELK2	88739.4	109552	66309
D3ZX21	D3ZX21	D3ZX21_RAT	Ap4e1	AP-4 complex subunit epsilon	1	ITNAQNVVVIVQK	ITNAQNVVVIVQK	2	ITNAQNVVVIVQK2		2854.45	436.012
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	ITNCPSVNDGIWHHIAITWTSTGGAWR	ITNC(UniMod:4)PSVNDGIWHHIAITWTSTGGAWR	4	ITNC(UniMod:4)PSVNDGIWHHIAITWTSTGGAWR4	29162.7	36218.8	30879.4
O70377	O70377	SNP23_RAT	Snap23	Synaptosomal-associated protein 23	1	ITNDAREDEMEENLTQVGSILGNLK	ITNDAREDEMEENLTQVGSILGNLK	3	ITNDAREDEMEENLTQVGSILGNLK3	65327.3	61889.7	68090
O70377	O70377	SNP23_RAT	Snap23	Synaptosomal-associated protein 23	1	ITNDAREDEMEENLTQVGSILGNLK	ITNDAREDEMEENLTQVGSILGNLK	4	ITNDAREDEMEENLTQVGSILGNLK4		10742.8	
A0A8I5ZNI3	A0A8I5ZNI3	A0A8I5ZNI3_RAT	Glipr1	GLI pathogenesis-related 1	1	ITNEDFIEECVEVHNHFR	ITNEDFIEEC(UniMod:4)VEVHNHFR	3	ITNEDFIEEC(UniMod:4)VEVHNHFR3	7918.67	7575.37	8044.57
A0A8I5ZNI3	A0A8I5ZNI3	A0A8I5ZNI3_RAT	Glipr1	GLI pathogenesis-related 1	1	ITNEDFIEECVEVHNHFR	ITNEDFIEEC(UniMod:4)VEVHNHFR	4	ITNEDFIEEC(UniMod:4)VEVHNHFR4	50725.6	45078.9	29456.7
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	ITNFEASLPDINNLQISEGSK	ITNFEASLPDINNLQISEGSK	3	ITNFEASLPDINNLQISEGSK3	10570.4	22739	
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	ITNFSTDIK	ITNFSTDIK	2	ITNFSTDIK2	61262.6	58767.4	43211.1
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	ITNFSTDIKDSK	ITNFSTDIKDSK	3	ITNFSTDIKDSK3	25110.5	28546.7	33473.9
O70377	O70377	SNP23_RAT	Snap23	Synaptosomal-associated protein 23	1	ITNGQPQQTTGAASGGYIK	ITNGQPQQTTGAASGGYIK	2	ITNGQPQQTTGAASGGYIK2	30948.8	30634.8	22842.5
O70377	O70377	SNP23_RAT	Snap23	Synaptosomal-associated protein 23	1	ITNGQPQQTTGAASGGYIK	ITNGQPQQTTGAASGGYIK	3	ITNGQPQQTTGAASGGYIK3	13965.5	13700.8	15487.5
P51886	P51886	LUM_RAT	Lum	Lumican	1	ITNIPDEYFNR	ITNIPDEYFNR	2	ITNIPDEYFNR2	2.81689e+07	2.98761e+07	2.93098e+07
P51886	P51886	LUM_RAT	Lum	Lumican	1	ITNIPDEYFNR	ITNIPDEYFNR	3	ITNIPDEYFNR3	596638	755221	753030
P51886	P51886	LUM_RAT	Lum	Lumican	1	ITNIPDEYFNRFTGLQYLR	ITNIPDEYFNRFTGLQYLR	3	ITNIPDEYFNRFTGLQYLR3	108537	147911	102717
P56571	P56571	ES1_RAT		ES1 protein homolog, mitochondrial	1	ITNLAQLSAANHDAAIFPGGFGAAK	ITNLAQLSAANHDAAIFPGGFGAAK	3	ITNLAQLSAANHDAAIFPGGFGAAK3	56203.7	57462.4	72836.8
D3ZJI7	D3ZJI7	D3ZJI7_RAT	Serpinb11	Serpin family B member 11	1	ITNLFDK	ITNLFDK	2	ITNLFDK2	13651.8	15988.9	16860.7
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	ITNLKQK	ITNLKQK	2	ITNLKQK2			41802.8
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	ITNLKQKVAQLEAQCQEPCK	ITNLKQKVAQLEAQC(UniMod:4)QEPC(UniMod:4)K	3	ITNLKQKVAQLEAQC(UniMod:4)QEPC(UniMod:4)K3	21674.8	19153.2	21043.7
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	ITNLTQQLEQASIVK	ITNLTQQLEQASIVK	2	ITNLTQQLEQASIVK2	7010.35		4339.63
A0A0G2KAF4	A0A0G2KAF4	A0A0G2KAF4_RAT	Nfxl1	Nuclear transcription factor, X-box binding-like 1	1	ITNLYVECR	ITNLYVEC(UniMod:4)R	2	ITNLYVEC(UniMod:4)R2	4311.9		6663.73
A0A8I6GE36	A0A8I6GE36	A0A8I6GE36_RAT	ENSRNOG00000070832	Ig-like domain-containing protein	1	ITNMDTADTATYYCAR	ITNMDTADTATYYC(UniMod:4)AR	2	ITNMDTADTATYYC(UniMod:4)AR2	10318.8	17557.8	9481.86
P85107	P85107	TGS1_RAT	Tgs1	Trimethylguanosine synthase	1	ITNNIVYFLPR	ITNNIVYFLPR	2	ITNNIVYFLPR2	1763.9		
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	ITNNNLNDSQR	ITNNNLNDSQR	2	ITNNNLNDSQR2	725436	980299	889225
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	ITNNNLNDSQR	ITNNNLNDSQR	3	ITNNNLNDSQR3		5989.64	
A0A8I5ZM79	A0A8I5ZM79	A0A8I5ZM79_RAT	Psmd7	Proteasome 26S subunit, non-ATPase 7	1	ITNQVHGLK	ITNQVHGLK	2	ITNQVHGLK2	26688.5	19872.4	26825.1
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	ITNQVIYLNPPIEECR	ITNQVIYLNPPIEEC(UniMod:4)R	3	ITNQVIYLNPPIEEC(UniMod:4)R3	88088.7	132286	130249
A0JPM9	A0JPM9;A0A8I6GKU6	EIF3J_RAT	Eif3j	Eukaryotic translation initiation factor 3 subunit J	0	ITNSLTVLCSEK	ITNSLTVLC(UniMod:4)SEK	2	ITNSLTVLC(UniMod:4)SEK2	143023	152519	154623
B2GV97	B2GV97	B2GV97_RAT	Sepsecs	O-phosphoseryl-tRNA(Sec) selenium transferase	1	ITNSLVLNVIK	ITNSLVLNVIK	2	ITNSLVLNVIK2	1699.76	2304.62	1985
M0RBD5	M0RBD5	M0RBD5_RAT	ENSRNOG00000070933	Ig-like domain-containing protein	1	ITNVDTADTATYYCAR	ITNVDTADTATYYC(UniMod:4)AR	2	ITNVDTADTATYYC(UniMod:4)AR2	490216	462080	518554
M0RBD5	M0RBD5	M0RBD5_RAT	ENSRNOG00000070933	Ig-like domain-containing protein	1	ITNVDTADTATYYCAR	ITNVDTADTATYYC(UniMod:4)AR	3	ITNVDTADTATYYC(UniMod:4)AR3	46920.7	46462.3	57854.8
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	ITNVSAIIKPYPK	ITNVSAIIKPYPK	3	ITNVSAIIKPYPK3	69514.1	58722.3	65503.1
Q8K4C0	Q8K4C0	FMO5_RAT	Fmo5	Flavin-containing monooxygenase 5	1	ITNYLSK	ITNYLSK	2	ITNYLSK2	18795.9	21844.4	16227.1
P26431	P26431	SL9A1_RAT	Slc9a1	Sodium/hydrogen exchanger 1	1	ITNYLTVPAHK	ITNYLTVPAHK	2	ITNYLTVPAHK2	24937.4	19695.7	22539.9
P26431	P26431	SL9A1_RAT	Slc9a1	Sodium/hydrogen exchanger 1	1	ITNYLTVPAHK	ITNYLTVPAHK	3	ITNYLTVPAHK3	194174	203909	197217
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	ITPAHDQNDYEVGQR	ITPAHDQNDYEVGQR	2	ITPAHDQNDYEVGQR2	28395.2	29767	34083.1
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	ITPAHDQNDYEVGQR	ITPAHDQNDYEVGQR	3	ITPAHDQNDYEVGQR3	342725	392637	357535
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	ITPAMAAR	ITPAMAAR	2	ITPAMAAR2	75392.9	88707	51226.5
A0A8I6AL39	A0A8I6AL39	A0A8I6AL39_RAT	Fgd3	FYVE, RhoGEF and PH domain containing 3	1	ITPCRPEEDVGSTQCSDPQK	ITPC(UniMod:4)RPEEDVGSTQC(UniMod:4)SDPQK	3	ITPC(UniMod:4)RPEEDVGSTQC(UniMod:4)SDPQK3		8791.87	6023.23
P62703	D3ZX01;P62703	RS4X_RAT	Rps4x	Small ribosomal subunit protein eS4	0	ITPEEAK	ITPEEAK	2	ITPEEAK2	72314.5	67348.8	67005.8
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	ITPELLTR	ITPELLTR	2	ITPELLTR2	929587	830912	909242
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	ITPFEEK	ITPFEEK	2	ITPFEEK2	773023	858398	606403
D3ZZB2	D3ZZB2	D3ZZB2_RAT	Pex1	Peroxisomal ATPase PEX1	1	ITPLETTPVIPR	ITPLETTPVIPR	2	ITPLETTPVIPR2	11950	12360.1	14209.4
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	ITPNIDEEGAMK	ITPNIDEEGAMK	2	ITPNIDEEGAMK2	34651.8	44631.2	22900.2
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	ITPPPPCLPEEPSPSQETLSTALR	ITPPPPC(UniMod:4)LPEEPSPSQETLSTALR	3	ITPPPPC(UniMod:4)LPEEPSPSQETLSTALR3	1271.21	2468.33	
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	ITPSYVAFTPEGER	ITPSYVAFTPEGER	2	ITPSYVAFTPEGER2	4.01805e+06	4.16794e+06	4.03602e+06
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	ITPSYVAFTPEGER	ITPSYVAFTPEGER	3	ITPSYVAFTPEGER3	422951	475402	492529
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	ITPTELPK	ITPTELPK	2	ITPTELPK2	53544.9	68356.7	76464.9
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	ITPTPAQK	ITPTPAQK	2	ITPTPAQK2		243374	
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	ITPYLLHFSNNSVPR	ITPYLLHFSNNSVPR	3	ITPYLLHFSNNSVPR3	8211.24		15271.6
O70257	O70257	STX7_RAT	Stx7	Syntaxin-7	1	ITQCSAEIQR	ITQC(UniMod:4)SAEIQR	2	ITQC(UniMod:4)SAEIQR2	113535	117576	124995
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	ITQDIFQR	ITQDIFQR	2	ITQDIFQR2	50916.2	49281.4	40611.5
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	ITQEDIK	ITQEDIK	2	ITQEDIK2	21272.4	29865.2	
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	ITQEDIKK	ITQEDIKK	2	ITQEDIKK2	12341.8	9337.6	11586.3
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	ITQEVLGAHDGGVFALCALR	ITQEVLGAHDGGVFALC(UniMod:4)ALR	3	ITQEVLGAHDGGVFALC(UniMod:4)ALR3	25303.4	22266.4	25509.1
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	ITQFCHHFLEGK	ITQFC(UniMod:4)HHFLEGK	2	ITQFC(UniMod:4)HHFLEGK2	17121.2	16907.1	13139.8
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	ITQFCHHFLEGK	ITQFC(UniMod:4)HHFLEGK	3	ITQFC(UniMod:4)HHFLEGK3	371088	409771	298877
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	ITQLVSEQANQVLAR	ITQLVSEQANQVLAR	2	ITQLVSEQANQVLAR2	14385.7	17313.6	9232.36
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	ITQLVSEQANQVLAR	ITQLVSEQANQVLAR	3	ITQLVSEQANQVLAR3	7386.71	9732.78	6891.46
Q6AYE2	Q6AYE2	SHLB1_RAT	Sh3glb1	Endophilin-B1	1	ITQSEFDR	ITQSEFDR	2	ITQSEFDR2	42214.6	43248.8	30424.5
P08010;Q5BK56	P08010;F1LXL7;P08009;Q5BK56;Q9Z1B2	GSTM2_RAT;GSTM4_RAT	Gstm2;Gstm4	Glutathione S-transferase Mu 2	0	ITQSNAILR	ITQSNAILR	2	ITQSNAILR2	8737.66	9640.72	4681.84
P04905	P04905	GSTM1_RAT	Gstm1	Glutathione S-transferase Mu 1	1	ITQSNAIMR	ITQSNAIMR	2	ITQSNAIMR2	32255.7	40980.4	40488.1
P04897	P04897	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	1	ITQSPLTICFPEYTGANK	ITQSPLTIC(UniMod:4)FPEYTGANK	3	ITQSPLTIC(UniMod:4)FPEYTGANK3	718134	722024	834685
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	ITQVLHFTK	ITQVLHFTK	2	ITQVLHFTK2	5.95481e+06	5.33777e+06	5.02009e+06
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	ITQVLHFTKDAK	ITQVLHFTKDAK	2	ITQVLHFTKDAK2	2140.03		
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	ITQVLHFTKDAK	ITQVLHFTKDAK	3	ITQVLHFTKDAK3	20443	55047.8	55715.1
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	ITQVQWNDPGAHYSLINK	ITQVQWNDPGAHYSLINK	3	ITQVQWNDPGAHYSLINK3	191469	191537	175420
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	ITQVSMASLK	ITQVSMASLK	2	ITQVSMASLK2	19502.1	25347.8	12887.8
A0A0G2K9T1	A0A0G2K9T1;A0A8I6AEH7	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	0	ITQWEDPR	ITQWEDPR	2	ITQWEDPR2	34680.4	27241.4	32108.7
Q80Z30	Q80Z30	PPM1E_RAT	Ppm1e	Protein phosphatase 1E	1	ITREEVEGESLDLCLQQLYK	ITREEVEGESLDLC(UniMod:4)LQQLYK	3	ITREEVEGESLDLC(UniMod:4)LQQLYK3	2376.57	6784.88	4883.25
O88959	O88959	INHBE_RAT	Inhbe	Inhibin beta E chain	1	ITRPLPQAALTR	ITRPLPQAALTR	3	ITRPLPQAALTR3	32265.3	26882.4	35700.7
Q9JHB5	Q9JHB5	TSNAX_RAT	Tsnax	Translin-associated protein X	1	ITSAPDMEEILTESESK	ITSAPDMEEILTESESK	2	ITSAPDMEEILTESESK2	10835.5	16009.9	10683.3
P08650	P08650	CO5_RAT	C5	Complement C5	1	ITSATEENIFVK	ITSATEENIFVK	2	ITSATEENIFVK2	470966	341714	284874
P08650	P08650	CO5_RAT	C5	Complement C5	1	ITSATEENIFVK	ITSATEENIFVK	3	ITSATEENIFVK3	5560.84		
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	ITSCFDSILQLEQSR	ITSC(UniMod:4)FDSILQLEQSR	2	ITSC(UniMod:4)FDSILQLEQSR2	9658.49	15535.4	9498.87
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	ITSCFDSILQLEQSR	ITSC(UniMod:4)FDSILQLEQSR	3	ITSC(UniMod:4)FDSILQLEQSR3	12530.3	15286.7	6253.56
P51583	P51583	PUR6_RAT	Paics	Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase	1	ITSCIFQLLQEAGIK	ITSC(UniMod:4)IFQLLQEAGIK	2	ITSC(UniMod:4)IFQLLQEAGIK2	9099.73	7873.48	6718.86
P51583	P51583	PUR6_RAT	Paics	Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase	1	ITSCIFQLLQEAGIK	ITSC(UniMod:4)IFQLLQEAGIK	3	ITSC(UniMod:4)IFQLLQEAGIK3	5462.68	4247.02	10776.9
Q9QZR6	Q9QZR6	SEPT9_RAT	Septin9	Septin-9	1	ITSDLLSNGIDVYPQK	ITSDLLSNGIDVYPQK	2	ITSDLLSNGIDVYPQK2	3986.93	5791.56	4097.75
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	ITSEALLVTQQLVK	ITSEALLVTQQLVK	2	ITSEALLVTQQLVK2	197065	226325	192225
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	ITSEALLVTQQLVK	ITSEALLVTQQLVK	3	ITSEALLVTQQLVK3	72953.6	71173.8	83348.3
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	ITSEELHYFVQNHFTSAR	ITSEELHYFVQNHFTSAR	3	ITSEELHYFVQNHFTSAR3	51530.9	35283.7	36727.1
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	ITSEELHYFVQNHFTSAR	ITSEELHYFVQNHFTSAR	4	ITSEELHYFVQNHFTSAR4	69210.9	100798	76768.1
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	ITSELVSK	ITSELVSK	2	ITSELVSK2	306757	312529	284123
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	ITSENPDEGFKPSSGTVQELNFR	ITSENPDEGFKPSSGTVQELNFR	3	ITSENPDEGFKPSSGTVQELNFR3	9419.88	7382.89	20404.1
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	ITSEPQDADVTSGNTVYFTCR	ITSEPQDADVTSGNTVYFTC(UniMod:4)R	3	ITSEPQDADVTSGNTVYFTC(UniMod:4)R3	3599.84	6301.67	4397.54
A0A0G2JTG3	A0A0G2JTG3	A0A0G2JTG3_RAT	Susd1	Sushi domain containing 1	1	ITSEWNK	ITSEWNK	2	ITSEWNK2	48393.2	47852.9	44365.6
P63329	P63329	PP2BA_RAT	Ppp3ca	Protein phosphatase 3 catalytic subunit alpha	1	ITSFEEAK	ITSFEEAK	2	ITSFEEAK2	298724	278438	298594
A0A8I5ZU98	A0A8I5ZU98	A0A8I5ZU98_RAT	Osbpl5	Oxysterol-binding protein	1	ITSGEEVLAR	ITSGEEVLAR	2	ITSGEEVLAR2	4589.53	7939.45	9672.65
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	ITSGNPQGFFSIHPK	ITSGNPQGFFSIHPK	2	ITSGNPQGFFSIHPK2	10101	9910.86	9714.48
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	ITSGNPQGFFSIHPK	ITSGNPQGFFSIHPK	3	ITSGNPQGFFSIHPK3	29617	24717.5	34896.4
Q6AYD3	Q6AYD3	PA2G4_RAT	Pa2g4	Proliferation-associated protein 2G4	1	ITSGPFEPDLYK	ITSGPFEPDLYK	2	ITSGPFEPDLYK2	31552.3	25682.3	23059.2
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	ITSIDTSEAK	ITSIDTSEAK	2	ITSIDTSEAK2	203060	186069	185341
P06765	P06765	PLF4_RAT	Pf4	Platelet factor 4	1	ITSLEVIK	ITSLEVIK	1	ITSLEVIK1	156227	126751	104910
P06765	P06765	PLF4_RAT	Pf4	Platelet factor 4	1	ITSLEVIK	ITSLEVIK	2	ITSLEVIK2	2.10353e+07	1.93672e+07	1.97827e+07
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	ITSLQEEVK	ITSLQEEVK	2	ITSLQEEVK2	31920.6	38825	40329.9
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	ITSNAMINACR	ITSNAMINAC(UniMod:4)R	2	ITSNAMINAC(UniMod:4)R2	26564.2	37315.1	25471.9
A0A0G2QC40	A0A0G2QC40	A0A0G2QC40_RAT	Mkrn1	RING-type E3 ubiquitin transferase	1	ITSNFVIPSEYWVEEK	ITSNFVIPSEYWVEEK	2	ITSNFVIPSEYWVEEK2	5801.55	7777.91	11100.3
P34064	P34064	PSA5_RAT	Psma5	Proteasome subunit alpha type-5	1	ITSPLMEPSSIEK	ITSPLMEPSSIEK	2	ITSPLMEPSSIEK2	1.94094e+06	1.8344e+06	1.9493e+06
P34064	P34064	PSA5_RAT	Psma5	Proteasome subunit alpha type-5	1	ITSPLMEPSSIEK	ITSPLMEPSSIEK	3	ITSPLMEPSSIEK3	14055.4	9663.07	13251.2
Q6AY17	Q6AY17	AB17B_RAT	Abhd17b	Alpha/beta hydrolase domain-containing protein 17B	1	ITSPVLIIHGTEDEVIDFSHGLALFER	ITSPVLIIHGTEDEVIDFSHGLALFER	4	ITSPVLIIHGTEDEVIDFSHGLALFER4	7477.66	9746.41	5488.84
Q5XIJ5	Q5XIJ5	AB17A_RAT	Abhd17a	Alpha/beta hydrolase domain-containing protein 17A	1	ITSPVLIIHGTEDEVIDFSHGLALYER	ITSPVLIIHGTEDEVIDFSHGLALYER	4	ITSPVLIIHGTEDEVIDFSHGLALYER4	1999.4	3552.55	
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	ITSPVLMGEENNVVHNQK	ITSPVLMGEENNVVHNQK	3	ITSPVLMGEENNVVHNQK3	70056.7	76121.5	80437
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	ITSSGPTINHGMWQTISVEELDR	ITSSGPTINHGMWQTISVEELDR	3	ITSSGPTINHGMWQTISVEELDR3	36734.4	50966.6	67204.5
D3ZXY2	D3ZXY2	D3ZXY2_RAT	Pdzd8	PDZ domain containing 8	1	ITSTLQVLK	ITSTLQVLK	2	ITSTLQVLK2			11689.4
D3ZMY4	D3ZMY4	D3ZMY4_RAT	ENSRNOG00000067010	Ig-like domain-containing protein	1	ITSVDIADTATYYCAR	ITSVDIADTATYYC(UniMod:4)AR	2	ITSVDIADTATYYC(UniMod:4)AR2	23924.9	22053.2	18931.5
D3ZMY4	D3ZMY4	D3ZMY4_RAT	ENSRNOG00000067010	Ig-like domain-containing protein	1	ITSVDIADTATYYCAR	ITSVDIADTATYYC(UniMod:4)AR	3	ITSVDIADTATYYC(UniMod:4)AR3	6697.22	7094.68	
A0A8I5ZLU0	A0A8I5ZLU0	A0A8I5ZLU0_RAT	ENSRNOG00000066926	Ig-like domain-containing protein	1	ITSVDTADTAIYYCAR	ITSVDTADTAIYYC(UniMod:4)AR	2	ITSVDTADTAIYYC(UniMod:4)AR2	18546.8	17471.4	17983.2
A0A8I5ZLU0	A0A8I5ZLU0	A0A8I5ZLU0_RAT	ENSRNOG00000066926	Ig-like domain-containing protein	1	ITSVDTADTAIYYCAR	ITSVDTADTAIYYC(UniMod:4)AR	3	ITSVDTADTAIYYC(UniMod:4)AR3	26112.1	20253.7	20161.2
A0A8I6AC42	A0A8I6AC42;A0A0G2K980;A0A8I6ACY1	A0A8I6AC42_RAT	ENSRNOG00000065690	Ig-like domain-containing protein	0	ITSVDTADTATYYCAR	ITSVDTADTATYYC(UniMod:4)AR	2	ITSVDTADTATYYC(UniMod:4)AR2	10362.4	5925.01	10613.6
A0A8I6AC42	A0A8I6AC42;A0A0G2K980;A0A8I6ACY1	A0A8I6AC42_RAT	ENSRNOG00000065690	Ig-like domain-containing protein	0	ITSVDTADTATYYCAR	ITSVDTADTATYYC(UniMod:4)AR	3	ITSVDTADTATYYC(UniMod:4)AR3	5994.9		8490.87
F1LWD1	F1LWD1	F1LWD1_RAT	Igh-6-ps1	Ig-like domain-containing protein	1	ITSVDTADTGTYYCTQR	ITSVDTADTGTYYC(UniMod:4)TQR	2	ITSVDTADTGTYYC(UniMod:4)TQR2	16857.5	14571	17354.1
F1LWD1	F1LWD1	F1LWD1_RAT	Igh-6-ps1	Ig-like domain-containing protein	1	ITSVDTADTGTYYCTQR	ITSVDTADTGTYYC(UniMod:4)TQR	3	ITSVDTADTGTYYC(UniMod:4)TQR3	15573.2	18774.6	11755.9
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	ITSWFLSK	ITSWFLSK	2	ITSWFLSK2	85494.7	84180.6	87936.5
A0A0G2KAF4	A0A0G2KAF4	A0A0G2KAF4_RAT	Nfxl1	Nuclear transcription factor, X-box binding-like 1	1	ITTADVSEK	ITTADVSEK	2	ITTADVSEK2	12055.4	13808.2	9952.33
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	ITTMQLER	ITTMQLER	2	ITTMQLER2	131670	159924	163272
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	ITTSMQK	ITTSMQK	2	ITTSMQK2	48069.7	53085	49735.9
A0A8I6G9X6	A0A8I6G9X6	A0A8I6G9X6_RAT	Kntc1	Kinetochore associated 1	1	ITTVNINQALNLLR	ITTVNINQALNLLR	2	ITTVNINQALNLLR2		2029.4	
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	ITVAALDAANLLASVPASQR	ITVAALDAANLLASVPASQR	3	ITVAALDAANLLASVPASQR3	7471.46	20697.2	13126.8
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	ITVAGQDCAFEPR	ITVAGQDC(UniMod:4)AFEPR	2	ITVAGQDC(UniMod:4)AFEPR2	40629.3	49267.2	50438.6
P35280	P35280	RAB8A_RAT	Rab8a	Ras-related protein Rab-8A	1	ITVEQQK	ITVEQQK	2	ITVEQQK2	298807	215241	
Q32Q07	Q32Q07	LRRN1_RAT	Lrrn1	Leucine-rich repeat neuronal protein 1	1	ITVETLSDKYK	ITVETLSDKYK	3	ITVETLSDKYK3	16295.4	10916	12003
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	ITVEYLQHIVEQK	ITVEYLQHIVEQK	3	ITVEYLQHIVEQK3	14230.7	14453.3	14576.3
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	ITVIPVCYR	ITVIPVC(UniMod:4)YR	2	ITVIPVC(UniMod:4)YR2	84030.5	80460.4	75986.5
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	ITVLQLSALLK	ITVLQLSALLK	2	ITVLQLSALLK2	40973.5	33922.2	21942.8
F1LUU1	F1LUU1	F1LUU1_RAT	Itga11	Integrin subunit alpha 11	1	ITVNAALQR	ITVNAALQR	2	ITVNAALQR2	6455.66		6444.76
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	ITVNLPASTPVR	ITVNLPASTPVR	2	ITVNLPASTPVR2	33324.4	30265.5	35545.1
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	ITVNLPASTPVRK	ITVNLPASTPVRK	3	ITVNLPASTPVRK3	30379	33602.9	17206.7
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	ITVPASEGSSYR	ITVPASEGSSYR	2	ITVPASEGSSYR2	45345.9	47059.9	54126.1
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	ITVPDTYEAR	ITVPDTYEAR	2	ITVPDTYEAR2	72148.9	66755.7	74959
O70196	O70196	PPCE_RAT	Prep	Prolyl endopeptidase	1	ITVPFLEQCPIR	ITVPFLEQC(UniMod:4)PIR	2	ITVPFLEQC(UniMod:4)PIR2	6690.05	13550.4	9945
F1LUU1	F1LUU1	F1LUU1_RAT	Itga11	Integrin subunit alpha 11	1	ITVPIATR	ITVPIATR	2	ITVPIATR2	32374.8	25031.1	31506.7
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	ITVPLVSEVQIAQLR	ITVPLVSEVQIAQLR	2	ITVPLVSEVQIAQLR2	55482.8	36978.9	33066.1
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	ITVPLVSEVQIAQLR	ITVPLVSEVQIAQLR	3	ITVPLVSEVQIAQLR3	7967.14	3962.96	3378.29
Q5I6B8	Q5I6B8	PI51C_RAT	Pip5k1c	Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma	1	ITVQVEPVCGVGVVVPK	ITVQVEPVC(UniMod:4)GVGVVVPK	2	ITVQVEPVC(UniMod:4)GVGVVVPK2	11133.9	8095.42	4039.82
Q5I6B8	Q5I6B8	PI51C_RAT	Pip5k1c	Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma	1	ITVQVEPVCGVGVVVPK	ITVQVEPVC(UniMod:4)GVGVVVPK	3	ITVQVEPVC(UniMod:4)GVGVVVPK3	1297.29	3400.46	4021.13
A0A8I6A2I6	A0A8I6A2I6	A0A8I6A2I6_RAT	Frrs1	Ferric-chelate reductase 1	1	ITVSQMK	ITVSQMK	2	ITVSQMK2	8942.86		21626.4
D3ZAP9	D3ZAP9	D3ZAP9_RAT	Gpd1l1	Glycerol-3-phosphate dehydrogenase [NAD(+)]	1	ITVVDDADTVELCGALK	ITVVDDADTVELC(UniMod:4)GALK	2	ITVVDDADTVELC(UniMod:4)GALK2	3870.42	1055.52	
Q9NQR8	Q9NQR8	NDUF4_RAT	Ndufaf4	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4	1	ITVVEALTLLNNHK	ITVVEALTLLNNHK	3	ITVVEALTLLNNHK3	2823.14		3114.85
P04642	P04642;A0A8I6ASS6	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	ITVVGVGAVGMACAISILMK	ITVVGVGAVGMAC(UniMod:4)AISILMK	3	ITVVGVGAVGMAC(UniMod:4)AISILMK3		6975.19	8028.9
P42123	P42123	LDHB_RAT	Ldhb	L-lactate dehydrogenase B chain	1	ITVVGVGQVGMACAISILGK	ITVVGVGQVGMAC(UniMod:4)AISILGK	3	ITVVGVGQVGMAC(UniMod:4)AISILGK3	9338.88	1053.33	4841.72
B2RZD5;D3ZSF9	B2RZD5;A0A0G2JZA6;D3ZSF9	B2RZD5_RAT;D3ZSF9_RAT	Rpl22l1;Rpl22l2	Ribosomal protein L22 like 1	0	ITVVSEK	ITVVSEK	2	ITVVSEK2	6962.53	6732.66	8133.48
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	ITWADNSLPK	ITWADNSLPK	2	ITWADNSLPK2	135162	119317	127518
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	ITWDPPSAPVK	ITWDPPSAPVK	2	ITWDPPSAPVK2	81167.1	85519.9	95474.9
A0A8I6G5Q1	A0A8I6G5Q1	A0A8I6G5Q1_RAT	Sema4d	Semaphorin 4D	1	ITWEHGEVGLVK	ITWEHGEVGLVK	3	ITWEHGEVGLVK3	19860.7	14375	11828.6
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	ITWPNGLTVDYVTER	ITWPNGLTVDYVTER	2	ITWPNGLTVDYVTER2	64029.7	106395	68677.8
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	ITWPNGLTVDYVTER	ITWPNGLTVDYVTER	3	ITWPNGLTVDYVTER3		9277.42	
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	ITWSIIR	ITWSIIR	2	ITWSIIR2	84417.3	75364.4	87794.6
P13221	P13221	AATC_RAT	Got1	Aspartate aminotransferase, cytoplasmic	1	ITWSNPPAQGAR	ITWSNPPAQGAR	2	ITWSNPPAQGAR2	55872.9	42080.9	42595.4
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	ITYEAQGSSGYSLR	ITYEAQGSSGYSLR	2	ITYEAQGSSGYSLR2	21723.8	16276.3	23183.4
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	ITYEAQGSSGYSLR	ITYEAQGSSGYSLR	3	ITYEAQGSSGYSLR3	8228.95		3613.78
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	ITYGETGGNSPVQEFTVPGSK	ITYGETGGNSPVQEFTVPGSK	3	ITYGETGGNSPVQEFTVPGSK3	31206.2	3.28967e+07	3.24429e+07
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	ITYGETGGNSPVQEFTVPGSK	ITYGETGGNSPVQEFTVPGSK	4	ITYGETGGNSPVQEFTVPGSK4	20304	25349.5	28830
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	ITYHPDGPEGQAYEIDFTPPFR	ITYHPDGPEGQAYEIDFTPPFR	3	ITYHPDGPEGQAYEIDFTPPFR3	39709.5	33640.1	36335.3
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	ITYLQNPK	ITYLQNPK	2	ITYLQNPK2	151425	140371	150405
P58751	P58751	RELN_RAT	Reln	Reelin	1	ITYPLPESLMGNPVR	ITYPLPESLMGNPVR	2	ITYPLPESLMGNPVR2	40774.7	56349.3	51651.4
P37727	P37727	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	1	ITYSQIIK	ITYSQIIK	2	ITYSQIIK2	57368.1	60426.6	45400.9
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	ITYVANVNPGGWAPASVLR	ITYVANVNPGGWAPASVLR	3	ITYVANVNPGGWAPASVLR3	5838.09	8967.09	14476.5
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	ITYVPAEHLEEFR	ITYVPAEHLEEFR	3	ITYVPAEHLEEFR3	31053.6	36077.3	35511.1
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	ITYVPVTGGPPSMVTVDGTDTETR	ITYVPVTGGPPSMVTVDGTDTETR	3	ITYVPVTGGPPSMVTVDGTDTETR3	446032	600387	543633
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	ITYVVRPGPGLPAGTLPLAGPPR	ITYVVRPGPGLPAGTLPLAGPPR	3	ITYVVRPGPGLPAGTLPLAGPPR3	52458.4	41011.7	53339.3
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	IVAALSIAK	IVAALSIAK	2	IVAALSIAK2	937982	1.02492e+06	877890
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	IVADAASVDGR	IVADAASVDGR	2	IVADAASVDGR2	27706.3	24829.7	28250.7
Q568Z6	Q568Z6	IST1_RAT	Ist1	IST1 homolog	1	IVADQLCAK	IVADQLC(UniMod:4)AK	2	IVADQLC(UniMod:4)AK2	39215.7	47217.5	43470.4
B2RZ72	B2RZ72	B2RZ72_RAT	Arpc4	Actin-related protein 2/3 complex subunit 4	1	IVAEEFLK	IVAEEFLK	1	IVAEEFLK1	3956.53	1434.85	974.527
B2RZ72	B2RZ72	B2RZ72_RAT	Arpc4	Actin-related protein 2/3 complex subunit 4	1	IVAEEFLK	IVAEEFLK	2	IVAEEFLK2	981652	926396	1.06798e+06
Q75WE7	Q75WE7	VWA5A_RAT	Vwa5a	von Willebrand factor A domain-containing protein 5A	1	IVAELQDK	IVAELQDK	2	IVAELQDK2	19408.9	15369.2	12600.1
A0A0G2K9K2	A0A0G2K598;A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	0	IVAEYEK	IVAEYEK	1	IVAEYEK1	3425.35	1061.47	793.56
A0A0G2K9K2	A0A0G2K598;A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	0	IVAEYEK	IVAEYEK	2	IVAEYEK2	247547	243043	271333
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	IVAFENAFER	IVAFENAFER	2	IVAFENAFER2	322070	389676	354510
A0A0G2JZA7	A0A0G2JZA7	A0A0G2JZA7_RAT	Cemip2	hyaluronoglucosaminidase	1	IVAIAVGDSAVK	IVAIAVGDSAVK	2	IVAIAVGDSAVK2	4870.31	5227.26	3914.18
P48508	P48508	GSH0_RAT	Gclm	Glutamate--cysteine ligase regulatory subunit	1	IVAIGTSDLDK	IVAIGTSDLDK	2	IVAIGTSDLDK2	9426.36	13153.9	5043.95
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	IVAISCAADVLK	IVAISC(UniMod:4)AADVLK	2	IVAISC(UniMod:4)AADVLK2	12932.3	5875.53	
Q5XI07	Q5XI07	LPP_RAT	Lpp	Lipoma-preferred partner homolog	1	IVALDRDFHVHCYR	IVALDRDFHVHC(UniMod:4)YR	4	IVALDRDFHVHC(UniMod:4)YR4	8117.14	10394.7	6715.88
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	IVALFPK	IVALFPK	2	IVALFPK2	158867	143276	132885
Q5RKI8	Q5RKI8	MITOS_RAT	Abcb8	Mitochondrial potassium channel ATP-binding subunit	1	IVALVGQSGGGK	IVALVGQSGGGK	2	IVALVGQSGGGK2	21189.7	7950.07	18928.6
A0A0G2KAF4	A0A0G2KAF4	A0A0G2KAF4_RAT	Nfxl1	Nuclear transcription factor, X-box binding-like 1	1	IVANTFITYTTHTDGDVHELEK	IVANTFITYTTHTDGDVHELEK	4	IVANTFITYTTHTDGDVHELEK4	4747.78	5443.35	8126.86
P13803	P13803	ETFA_RAT	Etfa	Electron transfer flavoprotein subunit alpha, mitochondrial	1	IVAPELYIAVGISGAIQHLAGMK	IVAPELYIAVGISGAIQHLAGMK	3	IVAPELYIAVGISGAIQHLAGMK3		8189.26	6831.11
P85971	P85971	6PGL_RAT	Pgls	6-phosphogluconolactonase	1	IVAPIGDSPKPPPQR	IVAPIGDSPKPPPQR	3	IVAPIGDSPKPPPQR3	54305.4	49893	58180.5
P47942	P47942;Q62950;Q62952	DPYL2_RAT	Dpysl2	Dihydropyrimidinase-related protein 2	0	IVAPPGGR	IVAPPGGR	2	IVAPPGGR2	59327.9	32927.7	37487.5
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	IVAQYDKEK	IVAQYDKEK	2	IVAQYDKEK2		4571.89	
D3ZL50	D3ZL50	D3ZL50_RAT	Skic3	Tetratricopeptide repeat domain 37	1	IVAQYTQQNAK	IVAQYTQQNAK	2	IVAQYTQQNAK2	2775.78		2198.61
Q6V0K7	Q6V0K7	OIT3_RAT	Oit3	Oncoprotein-induced transcript 3 protein	1	IVASNLVTGLPK	IVASNLVTGLPK	2	IVASNLVTGLPK2	102433	129282	130602
Q9EPH8	D4A233;B5DF80;Q9EPH8	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	0	IVATKPLYVALAQR	IVATKPLYVALAQR	2	IVATKPLYVALAQR2	9416.26	9175.96	5195.87
Q9EPH8	D4A233;B5DF80;Q9EPH8	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	0	IVATKPLYVALAQR	IVATKPLYVALAQR	3	IVATKPLYVALAQR3	61089.6	61247.6	57150.2
P0C8E4	P0C8E4	M3K7_RAT	Map3k7	Mitogen-activated protein kinase kinase kinase 7	1	IVATTAYTKPK	IVATTAYTKPK	3	IVATTAYTKPK3	7334.27	8860.74	9228.93
P13221	P13221	AATC_RAT	Got1	Aspartate aminotransferase, cytoplasmic	1	IVATTLSNPELFK	IVATTLSNPELFK	2	IVATTLSNPELFK2	37222.7	42735.3	42455.4
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	IVAVHPQFVR	IVAVHPQFVR	3	IVAVHPQFVR3	63708	19918.3	52292.5
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	IVAVTGAEAQK	IVAVTGAEAQK	2	IVAVTGAEAQK2	33899.8	25879.1	30535.3
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	IVAYTEK	IVAYTEK	1	IVAYTEK1	4536.7	3848.87	2063.48
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	IVAYTEK	IVAYTEK	2	IVAYTEK2	1.1845e+06	1.13068e+06	1.04499e+06
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	IVCDLIESK	IVC(UniMod:4)DLIESK	2	IVC(UniMod:4)DLIESK2	107863	118478	98865.2
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	IVCLVLDK	IVC(UniMod:4)LVLDK	2	IVC(UniMod:4)LVLDK2	29364.1	26578.7	27077.6
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	IVCNGALETENK	IVC(UniMod:4)NGALETENK	2	IVC(UniMod:4)NGALETENK2	4050.17	5860.16	6337.83
A0A8I6G251	A0A8I6G251	A0A8I6G251_RAT	Tnpo3	Transportin 3	1	IVCTPGQGLGDLR	IVC(UniMod:4)TPGQGLGDLR	2	IVC(UniMod:4)TPGQGLGDLR2	9537.71	7536.47	11506.4
A0A0U1RS05	A0A0U1RS05	A0A0U1RS05_RAT	Tlr13	Toll-like receptor 13	1	IVCYLLR	IVC(UniMod:4)YLLR	2	IVC(UniMod:4)YLLR2	20280.4	19649.7	12932.9
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	IVDCGVPAVLK	IVDC(UniMod:4)GVPAVLK	2	IVDC(UniMod:4)GVPAVLK2	8.04813e+06	8.81628e+06	8.52062e+06
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	IVDCGVPAVLK	IVDC(UniMod:4)GVPAVLK	3	IVDC(UniMod:4)GVPAVLK3	18338.8	28023	23951.9
B4F795	B4F795	CTL2_RAT	Slc44a2	Choline transporter-like protein 2	1	IVDDTPCPLLGK	IVDDTPC(UniMod:4)PLLGK	2	IVDDTPC(UniMod:4)PLLGK2	87763.7	87078.9	94600.2
Q91XS8	Q91XS8	ST17B_RAT	Stk17b	Serine/threonine-protein kinase 17B	1	IVDFGMSR	IVDFGMSR	2	IVDFGMSR2	20868.7	23790.5	27470.9
Q63470	A0A8I5ZP97;Q63470	DYR1A_RAT	Dyrk1a	Dual specificity tyrosine-phosphorylation-regulated kinase 1A	0	IVDFGSSCQLGQR	IVDFGSSC(UniMod:4)QLGQR	2	IVDFGSSC(UniMod:4)QLGQR2	16308.6	13636.6	12197.6
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	IVDGPDPENIILILK	IVDGPDPENIILILK	2	IVDGPDPENIILILK2	11063.1	14730.1	10038.2
D4A3T0	D4A3T0	D4A3T0_RAT	Sos1	SOS Ras/Rac guanine nucleotide exchange factor 1	1	IVDIHELSVK	IVDIHELSVK	3	IVDIHELSVK3	2900.5		3417.06
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	IVDLMKQLDEDTVFALVNYIFFK	IVDLMKQLDEDTVFALVNYIFFK	3	IVDLMKQLDEDTVFALVNYIFFK3	5351.78	2889.29	
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	IVDRIDSDGDGLVTTEELK	IVDRIDSDGDGLVTTEELK	3	IVDRIDSDGDGLVTTEELK3	57064.4	64417.6	54876.8
Q5U2R9	Q5U2R9	Q5U2R9_RAT	Scfd2	Sec1 family domain containing 2	1	IVDTLQDIICR	IVDTLQDIIC(UniMod:4)R	2	IVDTLQDIIC(UniMod:4)R2	7830.49	6700.24	7396.34
D3ZZJ7	D3ZZJ7	D3ZZJ7_RAT	Dcp1b	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	IVDVASQVALYTFGHR	IVDVASQVALYTFGHR	3	IVDVASQVALYTFGHR3	6799.24	5049.01	2601.44
P12368	P12368	KAP2_RAT	Prkar2a	cAMP-dependent protein kinase type II-alpha regulatory subunit	1	IVDVIGEK	IVDVIGEK	2	IVDVIGEK2	58562.7	58822	61032.6
D3ZYT8	D3ZYT8	D3ZYT8_RAT	Pikfyve	1-phosphatidylinositol-3-phosphate 5-kinase	1	IVDVRPTLVLVEK	IVDVRPTLVLVEK	3	IVDVRPTLVLVEK3	16523.5	14648.3	13933.2
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	IVEAGCVCNDAVIR	IVEAGC(UniMod:4)VC(UniMod:4)NDAVIR	2	IVEAGC(UniMod:4)VC(UniMod:4)NDAVIR2	47788.8	54089.5	47162.6
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	IVEAGCVCNDAVIR	IVEAGC(UniMod:4)VC(UniMod:4)NDAVIR	3	IVEAGC(UniMod:4)VC(UniMod:4)NDAVIR3	5745.42	3915.56	4063.57
F7EUD8	F7EUD8	F7EUD8_RAT	Trpc6	Transient receptor ion channel domain-containing protein	1	IVEAILNHPAFAEGK	IVEAILNHPAFAEGK	2	IVEAILNHPAFAEGK2	6918.08	9905.05	7316.24
F7EUD8	F7EUD8	F7EUD8_RAT	Trpc6	Transient receptor ion channel domain-containing protein	1	IVEAILNHPAFAEGK	IVEAILNHPAFAEGK	3	IVEAILNHPAFAEGK3	161072	141816	135877
F7EUD8	F7EUD8	F7EUD8_RAT	Trpc6	Transient receptor ion channel domain-containing protein	1	IVEAILNHPAFAEGKR	IVEAILNHPAFAEGKR	3	IVEAILNHPAFAEGKR3		8312.34	
F7EUD8	F7EUD8	F7EUD8_RAT	Trpc6	Transient receptor ion channel domain-containing protein	1	IVEAILNHPAFAEGKR	IVEAILNHPAFAEGKR	4	IVEAILNHPAFAEGKR4	1875.09	10262.1	9036.59
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	IVEANPLLEAFGNAK	IVEANPLLEAFGNAK	2	IVEANPLLEAFGNAK2	27876.8	53937.9	27712.9
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	IVECRDDGIDVR	IVEC(UniMod:4)RDDGIDVR	2	IVEC(UniMod:4)RDDGIDVR2		2270.81	
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	IVECRDDGIDVR	IVEC(UniMod:4)RDDGIDVR	3	IVEC(UniMod:4)RDDGIDVR3	30608.5	34847.4	34951.4
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	IVEDEPNK	IVEDEPNK	2	IVEDEPNK2	38686.1	32804.1	
G3V8G2	G3V8G2	G3V8G2_RAT	Psmd5	26S proteasome non-ATPase regulatory subunit 5	1	IVEDSEAVTEVLSNAELLR	IVEDSEAVTEVLSNAELLR	3	IVEDSEAVTEVLSNAELLR3	9363.54	1254.21	
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	IVEDWQK	IVEDWQK	2	IVEDWQK2	33007.6	32939.3	30569.8
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	IVEEINR	IVEEINR	2	IVEEINR2	1.07524e+06	719427	1.03263e+06
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	IVEEINRK	IVEEINRK	2	IVEEINRK2	322613	182373	123172
A0A0G2KA82	A0A0G2KA82	A0A0G2KA82_RAT	Sypl1	Synaptophysin-like 1	1	IVEELDPCK	IVEELDPC(UniMod:4)K	2	IVEELDPC(UniMod:4)K2	342612	337005	377346
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	IVEENALAPDFSK	IVEENALAPDFSK	2	IVEENALAPDFSK2	2.00038e+06	1.95318e+06	2.15432e+06
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	IVEENALAPDFSK	IVEENALAPDFSK	3	IVEENALAPDFSK3	35574.8	41285.9	54948.7
A0A8I5ZNK2	A0A8I5ZNK2	A0A8I5ZNK2_RAT	Oxsr1	non-specific serine/threonine protein kinase	1	IVEEPQSNR	IVEEPQSNR	2	IVEEPQSNR2	66747.6	73913.6	66427.1
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	IVEEPVLK	IVEEPVLK	2	IVEEPVLK2	25963.6	23141.6	16938.9
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	IVEFLQSFDEITAMTGDGVNDAPALK	IVEFLQSFDEITAMTGDGVNDAPALK	3	IVEFLQSFDEITAMTGDGVNDAPALK3	55991.3	69854.1	74979.7
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	IVEFLQSFDEITAMTGDGVNDAPALKK	IVEFLQSFDEITAMTGDGVNDAPALKK	3	IVEFLQSFDEITAMTGDGVNDAPALKK3	9652.86	11023.2	18804.5
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	IVEFLQSFDEITAMTGDGVNDAPALKK	IVEFLQSFDEITAMTGDGVNDAPALKK	4	IVEFLQSFDEITAMTGDGVNDAPALKK4	6436.98	7773.91	4374.7
P62870	P62870;A0A8I6GJ22;A0A8I5ZTT3	ELOB_RAT	Elob	Elongin-B	0	IVEGILK	IVEGILK	2	IVEGILK2	291796	237618	272902
P18292	P18292	THRB_RAT	F2	Prothrombin	1	IVEGWDAEK	IVEGWDAEK	2	IVEGWDAEK2	464769	540607	557480
P18292	P18292	THRB_RAT	F2	Prothrombin	1	IVEGWDAEKGIAPWQVMLFR	IVEGWDAEKGIAPWQVMLFR	3	IVEGWDAEKGIAPWQVMLFR3	54517.4	80792.4	65267.6
P18292	P18292	THRB_RAT	F2	Prothrombin	1	IVEGWDAEKGIAPWQVMLFRK	IVEGWDAEKGIAPWQVMLFRK	3	IVEGWDAEKGIAPWQVMLFRK3	7445.26	9917.09	10689.3
P18292	P18292	THRB_RAT	F2	Prothrombin	1	IVEGWDAEKGIAPWQVMLFRK	IVEGWDAEKGIAPWQVMLFRK	4	IVEGWDAEKGIAPWQVMLFRK4	27344.7	33675.9	35928.9
P34064	P34064	PSA5_RAT	Psma5	Proteasome subunit alpha type-5	1	IVEIDAHIGCAMSGLIADAK	IVEIDAHIGC(UniMod:4)AMSGLIADAK	3	IVEIDAHIGC(UniMod:4)AMSGLIADAK3	760910	782463	776014
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	IVEIPFNSTNK	IVEIPFNSTNK	2	IVEIPFNSTNK2	481260	469139	518912
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	IVEISYYNMGR	IVEISYYNMGR	2	IVEISYYNMGR2	29935.1	37970.8	26295.3
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	IVEISYYNMNR	IVEISYYNMNR	2	IVEISYYNMNR2	36386.6	27530.5	42273.9
P47858	P47858	PFKAM_RAT	Pfkm	ATP-dependent 6-phosphofructokinase, muscle type	1	IVEIVDAITTTAQSHQR	IVEIVDAITTTAQSHQR	3	IVEIVDAITTTAQSHQR3	27020.7	25000.3	18376.6
A0A8I5ZP70	A0A8I5ZP70	A0A8I5ZP70_RAT	Tom1l2	Target of myb1 like 2 membrane trafficking protein	1	IVELISR	IVELISR	2	IVELISR2	187483	172087	157245
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	IVELMGR	IVELMGR	2	IVELMGR2	600028	582912	558055
D3ZVC4	D3ZVC4	D3ZVC4_RAT	Arel1	Apoptosis resistant E3 ubiquitin protein ligase 1	1	IVELMTGGAQTPVTNANK	IVELMTGGAQTPVTNANK	2	IVELMTGGAQTPVTNANK2	1648.74		
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	IVELPAPADFLSLSSETKPK	IVELPAPADFLSLSSETKPK	3	IVELPAPADFLSLSSETKPK3	82342.8	110777	99559.2
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	IVEMEQDNK	IVEMEQDNK	2	IVEMEQDNK2	1.04565e+06	1.09162e+06	1.07572e+06
Q3T1J1	A0A8I5ZPE3;Q3T1J1;G3V7J7	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	0	IVEMSTSK	IVEMSTSK	1	IVEMSTSK1	18957.2	12882.5	5642.78
Q3T1J1	A0A8I5ZPE3;Q3T1J1;G3V7J7	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	0	IVEMSTSK	IVEMSTSK	2	IVEMSTSK2	7.4543e+06	7.73788e+06	7.78553e+06
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	IVENLQSFNEITAMTGDGVNDAPALK	IVENLQSFNEITAMTGDGVNDAPALK	3	IVENLQSFNEITAMTGDGVNDAPALK3	80064.8	90191.6	97939.6
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	IVENLQSFNEITAMTGDGVNDAPALKK	IVENLQSFNEITAMTGDGVNDAPALKK	3	IVENLQSFNEITAMTGDGVNDAPALKK3	61708.4	51910.4	70919.9
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	IVENLQSFNEITAMTGDGVNDAPALKK	IVENLQSFNEITAMTGDGVNDAPALKK	4	IVENLQSFNEITAMTGDGVNDAPALKK4	2944.05	3412.56	2363.85
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	IVEPPENIQEK	IVEPPENIQEK	2	IVEPPENIQEK2	18815.4	13870.5	17168
P05426	A0A8I5ZP24;P05426;F1LUE9;A0A8I6AL81	RL7_RAT	Rpl7	Large ribosomal subunit protein uL30	0	IVEPYIAWGYPNLK	IVEPYIAWGYPNLK	2	IVEPYIAWGYPNLK2	17215.4	25027.6	17115.4
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	IVEPYNK	IVEPYNK	2	IVEPYNK2	61797.2	56203	56797.1
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	IVESPEFSK	IVESPEFSK	2	IVESPEFSK2	60671.4	74238.5	49922.1
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	IVETHQPIVETYYGPGR	IVETHQPIVETYYGPGR	3	IVETHQPIVETYYGPGR3	11281.5	21557.8	11068.4
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	IVEVDGMDLR	IVEVDGMDLR	2	IVEVDGMDLR2	5031.98	7288.89	4914.31
Q63470	Q63470	DYR1A_RAT	Dyrk1a	Dual specificity tyrosine-phosphorylation-regulated kinase 1A	1	IVEVLGIPPAHILDQAPK	IVEVLGIPPAHILDQAPK	3	IVEVLGIPPAHILDQAPK3	7659.27	14701.3	11180.4
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	IVEVNGVCMEGK	IVEVNGVC(UniMod:4)MEGK	2	IVEVNGVC(UniMod:4)MEGK2	183844	193912	180814
P27615	P27615	SCRB2_RAT	Scarb2	Lysosome membrane protein 2	1	IVEWNGK	IVEWNGK	2	IVEWNGK2	47152.7	64050.2	38777.7
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	IVEYLVGDGPQNR	IVEYLVGDGPQNR	2	IVEYLVGDGPQNR2	438599	476518	423838
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	IVEYLVGDGPQNR	IVEYLVGDGPQNR	3	IVEYLVGDGPQNR3	84123.1	99653.5	96029.3
P04182	P04182	OAT_RAT	Oat	Ornithine aminotransferase, mitochondrial	1	IVFAVGNFWGR	IVFAVGNFWGR	2	IVFAVGNFWGR2	7835.39	11147.9	5869.89
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	IVFDNDADPMSESK	IVFDNDADPMSESK	2	IVFDNDADPMSESK2	342412	317023	384202
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	IVFGNIHQIYDWHK	IVFGNIHQIYDWHK	3	IVFGNIHQIYDWHK3	88364.2	72962.7	72883
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	IVFGNIHQIYDWHK	IVFGNIHQIYDWHK	4	IVFGNIHQIYDWHK4	117977	127291	96000.9
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	IVFLEESSQQEK	IVFLEESSQQEK	2	IVFLEESSQQEK2	72650.6	72769.3	85198.7
Q5XIM0	Q5XIM0	Q5XIM0_RAT	Bcs1l	Mitochondrial chaperone BCS1	1	IVFMTTNHIDR	IVFMTTNHIDR	3	IVFMTTNHIDR3	18312	10281.9	6806.88
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	IVFPHGITLDLVSR	IVFPHGITLDLVSR	3	IVFPHGITLDLVSR3	58715.1	85704.7	81304.7
Q9JLT0	Q63862;Q9JLT0	MYH10_RAT	Myh10	Myosin-10	0	IVFQEFR	IVFQEFR	2	IVFQEFR2	13377.5	14872.1	8675.16
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	IVFSPEEAK	IVFSPEEAK	2	IVFSPEEAK2	149139	146487	143833
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	IVFVPGCSVPLTIVK	IVFVPGC(UniMod:4)SVPLTIVK	2	IVFVPGC(UniMod:4)SVPLTIVK2	26353.1	22825.6	17006.4
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	IVFVPGCSVPLTIVK	IVFVPGC(UniMod:4)SVPLTIVK	3	IVFVPGC(UniMod:4)SVPLTIVK3	5709.81	8330.5	11593.1
D3ZW55	D3ZW55	ITPA_RAT	Itpa	Inosine triphosphate pyrophosphatase	1	IVFVTGNAK	IVFVTGNAK	2	IVFVTGNAK2	12518	10206.1	15971.7
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	IVGAEIQHITYR	IVGAEIQHITYR	2	IVGAEIQHITYR2	5479.01	4653.16	5261.31
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	IVGAEIQHITYR	IVGAEIQHITYR	3	IVGAEIQHITYR3	199134	168925	176714
A0A0G2K1A2	D3ZSY4;A0A0G2K1A2	A0A0G2K1A2_RAT	Mpo	Myeloperoxidase	0	IVGAMVQIITYR	IVGAMVQIITYR	2	IVGAMVQIITYR2	12974.7	7875.1	3423.25
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	IVGAPMHDLLLWNNATVTTCHSK	IVGAPMHDLLLWNNATVTTC(UniMod:4)HSK	3	IVGAPMHDLLLWNNATVTTC(UniMod:4)HSK3	3879.4		
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	IVGAPMHDLLLWNNATVTTCHSK	IVGAPMHDLLLWNNATVTTC(UniMod:4)HSK	4	IVGAPMHDLLLWNNATVTTC(UniMod:4)HSK4	34436.1	19113.6	35880.1
P12075	P12075	COX5B_RAT	Cox5b	Cytochrome c oxidase subunit 5B, mitochondrial	1	IVGCICEEDNCTVIWFWLHQGESQR	IVGC(UniMod:4)IC(UniMod:4)EEDNC(UniMod:4)TVIWFWLHQGESQR	4	IVGC(UniMod:4)IC(UniMod:4)EEDNC(UniMod:4)TVIWFWLHQGESQR4	5598.03		8402.17
B5DFN2	B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	1	IVGCTHITAQTAVLIETLCALGAQCR	IVGC(UniMod:4)THITAQTAVLIETLC(UniMod:4)ALGAQC(UniMod:4)R	3	IVGC(UniMod:4)THITAQTAVLIETLC(UniMod:4)ALGAQC(UniMod:4)R3	11870	40771.8	20219.3
B5DFN2	B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	1	IVGCTHITAQTAVLIETLCALGAQCR	IVGC(UniMod:4)THITAQTAVLIETLC(UniMod:4)ALGAQC(UniMod:4)R	4	IVGC(UniMod:4)THITAQTAVLIETLC(UniMod:4)ALGAQC(UniMod:4)R4	9497.68	7752.44	4936.24
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	IVGEDYSVWSK	IVGEDYSVWSK	2	IVGEDYSVWSK2	128043	130131	153731
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	IVGELEQMVSEDVPLDHR	IVGELEQMVSEDVPLDHR	3	IVGELEQMVSEDVPLDHR3	18357.6	14742.4	13652.3
O88483	O88483	PDP1_RAT	Pdp1	[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial	1	IVGEYLTGMHHQQPIAVGGYK	IVGEYLTGMHHQQPIAVGGYK	4	IVGEYLTGMHHQQPIAVGGYK4	3502.67	6623.93	5248.43
Q05511	Q05511	HEPS_RAT	Hpn	Serine protease hepsin	1	IVGGQDSSLGR	IVGGQDSSLGR	2	IVGGQDSSLGR2	103542	118753	88767.6
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	IVGGQECK	IVGGQEC(UniMod:4)K	1	IVGGQEC(UniMod:4)K1	147386		95244.7
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	IVGGQECK	IVGGQEC(UniMod:4)K	2	IVGGQEC(UniMod:4)K2			4.04724e+06
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	IVGGQECKR	IVGGQEC(UniMod:4)KR	2	IVGGQEC(UniMod:4)KR2			81540.8
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	IVGGYVCPK	IVGGYVC(UniMod:4)PK	2	IVGGYVC(UniMod:4)PK2	3.50844e+06	3.28218e+06	3.26438e+06
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	IVGHLDELGMGSTFCTSK	IVGHLDELGMGSTFC(UniMod:4)TSK	2	IVGHLDELGMGSTFC(UniMod:4)TSK2	818.221	2720.62	1987.17
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	IVGHLDELGMGSTFCTSK	IVGHLDELGMGSTFC(UniMod:4)TSK	3	IVGHLDELGMGSTFC(UniMod:4)TSK3	89070	79529.3	86794.8
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	IVGIPSPSSLFK	IVGIPSPSSLFK	2	IVGIPSPSSLFK2	130370	180515	157172
Q9WTS8	Q9WTS8	FCN1_RAT	Fcn1	Ficolin-1	1	IVGLGAQDK	IVGLGAQDK	2	IVGLGAQDK2	473910	457778	482883
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	IVGLSTALANAR	IVGLSTALANAR	2	IVGLSTALANAR2	51622.9	68337.5	41921.8
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	IVGNGSEQQLQK	IVGNGSEQQLQK	2	IVGNGSEQQLQK2	29067.5	34756.2	29148.8
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	IVGNLLYYR	IVGNLLYYR	2	IVGNLLYYR2	104410	123190	89717
Q811A3	Q811A3	PLOD2_RAT	Plod2	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2	1	IVGPEENLSQAEAR	IVGPEENLSQAEAR	2	IVGPEENLSQAEAR2	8056.9	10467.8	9601.74
D3ZGB8	D3ZGB8	D3ZGB8_RAT	Cilp	Cartilage intermediate layer protein	1	IVGPLEVNVR	IVGPLEVNVR	2	IVGPLEVNVR2	29327.8	38920.4	36648.6
G3V9N0	D3ZSR2;G3V9N0	G3V9N0_RAT	Pabpc4	Polyadenylate-binding protein	0	IVGSKPLYVALAQR	IVGSKPLYVALAQR	3	IVGSKPLYVALAQR3	3216.4	2303.88	5849.59
A0A8I6G1H3	A0A8I6G1H3	A0A8I6G1H3_RAT	Irak4	Interleukin-1 receptor-associated kinase 4	1	IVGTTAYMAPEALR	IVGTTAYMAPEALR	2	IVGTTAYMAPEALR2			7177.66
A0A8I5ZM79	A0A8I5ZM79	A0A8I5ZM79_RAT	Psmd7	Proteasome 26S subunit, non-ATPase 7	1	IVGWYHTGPK	IVGWYHTGPK	2	IVGWYHTGPK2	40463.3	30626.5	28855.7
A0A8I5ZM79	A0A8I5ZM79	A0A8I5ZM79_RAT	Psmd7	Proteasome 26S subunit, non-ATPase 7	1	IVGWYHTGPK	IVGWYHTGPK	3	IVGWYHTGPK3	175484	155350	182488
Q4V8K3	Q4V8K3;A0A8I6A9B2;A0A0G2K7P4	NAA11_RAT	Naa11	N-alpha-acetyltransferase 11	0	IVGYVLAK	IVGYVLAK	2	IVGYVLAK2	87337.5	74165.8	68131.2
Q06880	Q06880	NBL1_RAT	Nbl1	Neuroblastoma suppressor of tumorigenicity 1	1	IVHCSCQACGK	IVHC(UniMod:4)SC(UniMod:4)QAC(UniMod:4)GK	2	IVHC(UniMod:4)SC(UniMod:4)QAC(UniMod:4)GK2			6482.53
D4A305	D4A305	D4A305_RAT	Mix23	Protein MIX23	1	IVHELNTTVPTASFAGK	IVHELNTTVPTASFAGK	3	IVHELNTTVPTASFAGK3	48059	50075.8	51660
B2GVB9	B2GVB9;D3ZTV0	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	0	IVHEYIGGYIFLSTR	IVHEYIGGYIFLSTR	2	IVHEYIGGYIFLSTR2	8138.17	9280.44	11935.5
B2GVB9	B2GVB9;D3ZTV0	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	0	IVHEYIGGYIFLSTR	IVHEYIGGYIFLSTR	3	IVHEYIGGYIFLSTR3	90921.5	72889.2	49175.6
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	IVHFSVGHDGSHALLVAEDGSVFFTGSASK	IVHFSVGHDGSHALLVAEDGSVFFTGSASK	4	IVHFSVGHDGSHALLVAEDGSVFFTGSASK4	6869.35	5715.38	5734.19
A0A8I6ANR6	A0A8I6ANR6	A0A8I6ANR6_RAT	Chuk	IkappaB kinase	1	IVHILNMTSAK	IVHILNMTSAK	3	IVHILNMTSAK3	6753.47	4266.11	4667.05
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	IVHLQETCDLEK	IVHLQETC(UniMod:4)DLEK	3	IVHLQETC(UniMod:4)DLEK3	5105.01	3778.54	6175.77
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	IVICVQQTANK	IVIC(UniMod:4)VQQTANK	2	IVIC(UniMod:4)VQQTANK2	48122.4	46469.2	44830.6
A0A8I6AD67	A0A8I6AD67	A0A8I6AD67_RAT	Parp9	Poly [ADP-ribose] polymerase	1	IVIFPVDVETYK	IVIFPVDVETYK	2	IVIFPVDVETYK2	8878.5	8935.51	6814.49
Q6AYQ9	Q6AYQ9	Q6AYQ9_RAT	Ppic	Peptidyl-prolyl cis-trans isomerase	1	IVIGLFGK	IVIGLFGK	2	IVIGLFGK2	227901	199793	196863
P63074	P63074	IF4E_RAT	Eif4e	Eukaryotic translation initiation factor 4E	1	IVIGYQSHADTATK	IVIGYQSHADTATK	3	IVIGYQSHADTATK3	99449.1	84210.6	80242.5
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	IVIKPEPNLFHDGR	IVIKPEPNLFHDGR	4	IVIKPEPNLFHDGR4	27843.6	34370.3	25458.4
E9PT66	E9PT66	E9PT66_RAT	Sf3b3	Splicing factor 3b, subunit 3	1	IVILEYQPSK	IVILEYQPSK	2	IVILEYQPSK2	12468.1	12538.1	3388.33
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	IVILPDYLEIAR	IVILPDYLEIAR	2	IVILPDYLEIAR2	402984	448046	374574
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	IVILPDYLEIAR	IVILPDYLEIAR	3	IVILPDYLEIAR3	6608.03	5622.9	6308.83
Q9Z158	Q9Z158	STX17_RAT	Stx17	Syntaxin-17	1	IVIPTDLER	IVIPTDLER	2	IVIPTDLER2	23762.4	14350.9	18007
P29117	P29117	PPIF_RAT	Ppif	Peptidyl-prolyl cis-trans isomerase F, mitochondrial	1	IVITDCGQLS	IVITDC(UniMod:4)GQLS	2	IVITDC(UniMod:4)GQLS2	88259.3	76184.2	68121.6
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	IVITGDAALDHDQALAQAIR	IVITGDAALDHDQALAQAIR	3	IVITGDAALDHDQALAQAIR3	24883.2	24894.7	16386.6
Q9JMB3	Q9JMB3	Q9JMB3_RAT	Epb41l3	Erythrocyte membrane protein band 4.1-like 3	1	IVITGDADIDHDQALAQAIK	IVITGDADIDHDQALAQAIK	3	IVITGDADIDHDQALAQAIK3	9464.47		6613.89
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	IVITGDADIDHDQVLVQAIK	IVITGDADIDHDQVLVQAIK	3	IVITGDADIDHDQVLVQAIK3	197596	175727	175622
D3ZRB3	D3ZRB3	D3ZRB3_RAT	Rhof	Ras homolog family member F, filopodia associated	1	IVIVGDGGCGK	IVIVGDGGC(UniMod:4)GK	2	IVIVGDGGC(UniMod:4)GK2	223604	207549	202429
Q03346	Q03346	MPPB_RAT	Pmpcb	Mitochondrial-processing peptidase subunit beta	1	IVLAAAGGVCHNELLELAK	IVLAAAGGVC(UniMod:4)HNELLELAK	3	IVLAAAGGVC(UniMod:4)HNELLELAK3	9567.99	6737.24	9023.04
F7FLB2	F7FLB2	F7FLB2_RAT	Pgm2	phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	1	IVLANDPDADR	IVLANDPDADR	2	IVLANDPDADR2	13211.9	15083	11226.8
F7FLB2	F7FLB2	F7FLB2_RAT	Pgm2	phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	1	IVLANDPDADRLAVAEK	IVLANDPDADRLAVAEK	3	IVLANDPDADRLAVAEK3	19278.4	17172.3	29530.3
Q63186	Q63186	EI2BD_RAT	Eif2b4	Translation initiation factor eIF-2B subunit delta	1	IVLASQAISR	IVLASQAISR	2	IVLASQAISR2	50064.8	41984.8	49069.9
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	IVLDNSVFSEHR	IVLDNSVFSEHR	2	IVLDNSVFSEHR2	29698.9	29309.1	21501.3
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	IVLDNSVFSEHR	IVLDNSVFSEHR	3	IVLDNSVFSEHR3	817528	804857	819982
Q6PEC1	Q6PEC1	TBCA_RAT	Tbca	Tubulin-specific chaperone A	1	IVLDSVK	IVLDSVK	2	IVLDSVK2	124043	116912	86344.5
F1M0B5	F1M0B5	F1M0B5_RAT	Cd84	CD84 molecule	1	IVLEADDVSK	IVLEADDVSK	2	IVLEADDVSK2	14787	19141.9	16571
P47942	P47942	DPYL2_RAT	Dpysl2	Dihydropyrimidinase-related protein 2	1	IVLEDGTLHVTEGSGR	IVLEDGTLHVTEGSGR	3	IVLEDGTLHVTEGSGR3	45958.9	47238.5	64719.5
D3ZY46	G3V982;D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	0	IVLENSSR	IVLENSSR	2	IVLENSSR2	83286.4	67597.4	74665.9
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	IVLESLQDTQAQESTVGGGVNR	IVLESLQDTQAQESTVGGGVNR	3	IVLESLQDTQAQESTVGGGVNR3	29197.8	33117.9	26414.8
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	IVLEVALHSAR	IVLEVALHSAR	3	IVLEVALHSAR3	4971.87	1851.69	
D4A5K6	D4A5K6	D4A5K6_RAT	Zmpste24	CAAX prenyl protease	1	IVLFDTLLEEYSVPNK	IVLFDTLLEEYSVPNK	2	IVLFDTLLEEYSVPNK2	3634.48	2507.71	
D4A5K6	D4A5K6	D4A5K6_RAT	Zmpste24	CAAX prenyl protease	1	IVLFDTLLEEYSVPNK	IVLFDTLLEEYSVPNK	3	IVLFDTLLEEYSVPNK3	17678.4	6587.36	9099.37
A0A8I5ZU57	A0A8I5ZU57;F1M4U0	A0A8I5ZU57_RAT	Ccny	Cyclin Y	0	IVLGAILLASK	IVLGAILLASK	2	IVLGAILLASK2	6435		6519.28
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	IVLGGTTIHNTK	IVLGGTTIHNTK	2	IVLGGTTIHNTK2	8168.29		4102.22
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	IVLGGTTIHNTK	IVLGGTTIHNTK	3	IVLGGTTIHNTK3	75921.7	68302.3	95319.9
P35433	P35433	PUR1_RAT	Ppat	Amidophosphoribosyltransferase	1	IVLIDDSIVR	IVLIDDSIVR	2	IVLIDDSIVR2	6855.09	8727.51	5886.59
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	IVLLDSSLEYK	IVLLDSSLEYK	2	IVLLDSSLEYK2	260213	304533	218285
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	IVLLDSSLEYKK	IVLLDSSLEYKK	3	IVLLDSSLEYKK3	57291.2	74877.5	66383.4
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	IVLNFNPHFEIEK	IVLNFNPHFEIEK	2	IVLNFNPHFEIEK2	19244.5	15332.4	10059.8
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	IVLNFNPHFEIEK	IVLNFNPHFEIEK	3	IVLNFNPHFEIEK3	51435.3	53395.1	43168.7
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	IVLNGIDLK	IVLNGIDLK	2	IVLNGIDLK2	25615.2	12727.2	17154.2
G3V784	G3V784	G3V784_RAT	Adpgk	ADP-dependent glucokinase	1	IVLNPNKPVVEWHR	IVLNPNKPVVEWHR	4	IVLNPNKPVVEWHR4	24122.8	41791.6	31549.4
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	IVLNSADKELSLVK	IVLNSADKELSLVK	3	IVLNSADKELSLVK3	11011.8		17211.8
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	IVLNVIQTAVDQFAR	IVLNVIQTAVDQFAR	2	IVLNVIQTAVDQFAR2	5938.89	11522.7	6942.76
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	IVLNVIQTAVDQFAR	IVLNVIQTAVDQFAR	3	IVLNVIQTAVDQFAR3	9728.59	14415.9	9373.97
B1WBN7	B1WBN7	B1WBN7_RAT	Fam20c	FAM20C	1	IVLQAVR	IVLQAVR	2	IVLQAVR2	240406	192089	198454
Q5BJY9	Q63279;Q5BJY9	K1C18_RAT	Krt18	Keratin, type I cytoskeletal 18	0	IVLQIDNAR	IVLQIDNAR	2	IVLQIDNAR2	20196.7		2021.47
P97697	P97697	IMPA1_RAT	Impa1	Inositol monophosphatase 1	1	IVLSNMER	IVLSNMER	2	IVLSNMER2	39621.7	56453.5	43700.8
P81795	C9WPN6;P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	0	IVLTNPVCTEVGEK	IVLTNPVC(UniMod:4)TEVGEK	2	IVLTNPVC(UniMod:4)TEVGEK2	198753	201963	190895
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	IVLYQTDTSLTPWTVR	IVLYQTDTSLTPWTVR	2	IVLYQTDTSLTPWTVR2	7716.65	7543.36	
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	IVLYQTDTSLTPWTVR	IVLYQTDTSLTPWTVR	3	IVLYQTDTSLTPWTVR3	4220.21	4840.28	
P30839	P30839	AL3A2_RAT	Aldh3a2	Aldehyde dehydrogenase family 3 member A2	1	IVMEAAAK	IVMEAAAK	2	IVMEAAAK2	78880.1	70087.8	95719.9
Q6TMG5	Q6TMG5	NEMO_RAT	Ikbkg	NF-kappa-B essential modulator	1	IVMETVPVLK	IVMETVPVLK	2	IVMETVPVLK2	30114.1	45041.4	49834.5
Q63524	Q63524	TMED2_RAT	Tmed2	Transmembrane emp24 domain-containing protein 2	1	IVMFTIDIGEAPK	IVMFTIDIGEAPK	2	IVMFTIDIGEAPK2	82933.4	117162	74264
Q2QDE7	Q2QDE7	DNSL1_RAT	Dnase1l1	Deoxyribonuclease-1-like 1	1	IVMHGQGCQK	IVMHGQGC(UniMod:4)QK	2	IVMHGQGC(UniMod:4)QK2			14976.6
A0A0G2K8N6	A0A0G2K8N6	A0A0G2K8N6_RAT	Ankmy2	Ankyrin repeat and MYND domain containing 2	1	IVMLVSENPLLADAAALGK	IVMLVSENPLLADAAALGK	2	IVMLVSENPLLADAAALGK2	17215.3	19014.7	15310.5
A0A0G2K8N6	A0A0G2K8N6	A0A0G2K8N6_RAT	Ankmy2	Ankyrin repeat and MYND domain containing 2	1	IVMLVSENPLLADAAALGK	IVMLVSENPLLADAAALGK	3	IVMLVSENPLLADAAALGK3	5262.95	5636.76	5207.73
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	IVNEGGIDPLLR	IVNEGGIDPLLR	2	IVNEGGIDPLLR2	59769.9	59062.6	67811
A0A8I5ZM01	A0A8I5ZM01	A0A8I5ZM01_RAT	Evi5	Ecotropic viral integration site 5	1	IVNEWDDVR	IVNEWDDVR	2	IVNEWDDVR2		6350.55	
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	IVNHPTMLQDPDVR	IVNHPTMLQDPDVR	2	IVNHPTMLQDPDVR2	17642.4	22268.5	11061.1
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	IVNHPTMLQDPDVR	IVNHPTMLQDPDVR	3	IVNHPTMLQDPDVR3	285894	341590	310385
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	IVNLACK	IVNLAC(UniMod:4)K	2	IVNLAC(UniMod:4)K2	27173.8	44661.8	52422.8
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	IVNLLNDLYTR	IVNLLNDLYTR	2	IVNLLNDLYTR2	387944	384936	330041
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	IVNQPSSLFGSK	IVNQPSSLFGSK	2	IVNQPSSLFGSK2	137577	132361	125646
Q8R491	Q8R491	EHD3_RAT	Ehd3	EH domain-containing protein 3	1	IVNTPEVIR	IVNTPEVIR	2	IVNTPEVIR2	359282	255362	244951
Q4KLL4	Q4KLL4	TM9S4_RAT	Tm9sf4	Transmembrane 9 superfamily member 4	1	IVNTPFQVLMNSEK	IVNTPFQVLMNSEK	2	IVNTPFQVLMNSEK2	69416.1	75429.4	61584
Q4KLL4	Q4KLL4	TM9S4_RAT	Tm9sf4	Transmembrane 9 superfamily member 4	1	IVNTPFQVLMNSEK	IVNTPFQVLMNSEK	3	IVNTPFQVLMNSEK3	17226	22064.5	17524.6
Q4KLL4	Q4KLL4	TM9S4_RAT	Tm9sf4	Transmembrane 9 superfamily member 4	1	IVNTPFQVLMNSEKK	IVNTPFQVLMNSEKK	3	IVNTPFQVLMNSEKK3	12401.4	5624.51	14029.4
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	IVNTPQGCLWYK	IVNTPQGC(UniMod:4)LWYK	2	IVNTPQGC(UniMod:4)LWYK2	45840.2	46035.4	37801.5
A0A8I6ABF2	A0A8I6ABF2	A0A8I6ABF2_RAT	Lmf1	Lipase maturation factor	1	IVNTYGAFGSITK	IVNTYGAFGSITK	2	IVNTYGAFGSITK2	13265.1	17491.1	21130.5
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	IVPEWQDYDQEIK	IVPEWQDYDQEIK	2	IVPEWQDYDQEIK2	523731	577868	515263
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	IVPEWQDYDQEIK	IVPEWQDYDQEIK	3	IVPEWQDYDQEIK3	12610.7	15370.3	9921.85
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	IVPHICNLLGDPNSQVR	IVPHIC(UniMod:4)NLLGDPNSQVR	3	IVPHIC(UniMod:4)NLLGDPNSQVR3	33408.3	37320.4	27214.2
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	IVPIGQPSQR	IVPIGQPSQR	2	IVPIGQPSQR2	58005.4	65740.1	48399.1
P20786	P20786	PGFRA_RAT	Pdgfra	Platelet-derived growth factor receptor alpha	1	IVPLSSSFSLR	IVPLSSSFSLR	2	IVPLSSSFSLR2	93298.9	100449	84589
Q8VHF5	Q8VHF5	CISY_RAT	Cs	Citrate synthase, mitochondrial	1	IVPNILLEQGK	IVPNILLEQGK	2	IVPNILLEQGK2	1.01702e+06	971647	1.10442e+06
A0A8I5ZUS1	A0A8I5ZUS1	A0A8I5ZUS1_RAT	Map3k4	Mitogen activated protein kinase kinase kinase 4	1	IVPQVETVDTLR	IVPQVETVDTLR	2	IVPQVETVDTLR2	27967	14116.3	22392.1
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	IVPSLLFNMQK	IVPSLLFNMQK	2	IVPSLLFNMQK2	131359	114261	109562
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	IVPSPDDSK	IVPSPDDSK	2	IVPSPDDSK2	299766	333291	282926
F1LU48	F1LU48	F1LU48_RAT	Ergic1	Endoplasmic reticulum-Golgi intermediate compartment protein	1	IVPTVYEDK	IVPTVYEDK	2	IVPTVYEDK2	123820	133910	127183
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	IVPVEHLTPFPCGIFHK	IVPVEHLTPFPC(UniMod:4)GIFHK	4	IVPVEHLTPFPC(UniMod:4)GIFHK4	19086.1	18674.8	25727.7
Q4KM73	Q4KM73	KCY_RAT	Cmpk1	UMP-CMP kinase	1	IVPVEITISLLK	IVPVEITISLLK	2	IVPVEITISLLK2	47375.6	45217	24138.7
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	IVPVEQSPGK	IVPVEQSPGK	2	IVPVEQSPGK2	509645	490248	426186
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	IVPVEQSPGKK	IVPVEQSPGKK	2	IVPVEQSPGKK2	39392.2	32500.2	26038.2
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	IVPVEQSPGKK	IVPVEQSPGKK	3	IVPVEQSPGKK3	211818	199932	190103
F1M784	F1M784	F1M784_RAT	Pik3ap1	Phosphoinositide-3-kinase adaptor protein 1	1	IVPYNTETLDK	IVPYNTETLDK	2	IVPYNTETLDK2	48618.8	59717.1	39380.7
Q5XIH7	Q5XIH7	PHB2_RAT	Phb2	Prohibitin-2	1	IVQAEGEAEAAK	IVQAEGEAEAAK	2	IVQAEGEAEAAK2	219834	176646	203365
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	IVQATTLLTMDK	IVQATTLLTMDK	2	IVQATTLLTMDK2	13479.5	25694.1	17110.4
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	IVQDAYK	IVQDAYK	2	IVQDAYK2	81020.1	77141.4	55503.2
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	IVQDLSESCFGYLK	IVQDLSESC(UniMod:4)FGYLK	2	IVQDLSESC(UniMod:4)FGYLK2	11889	7930.92	9384.38
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	IVQESDLER	IVQESDLER	2	IVQESDLER2	171058	179122	170809
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	IVQFSPSGK	IVQFSPSGK	2	IVQFSPSGK2	157110	168529	152488
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	IVQGDTEGR	IVQGDTEGR	2	IVQGDTEGR2			161409
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	IVQGDTEGRLEVVTDPMTNTGYVK	IVQGDTEGRLEVVTDPMTNTGYVK	3	IVQGDTEGRLEVVTDPMTNTGYVK3	37899.9	37145.2	15727.9
P62142	P62142	PP1B_RAT	Ppp1cb	Serine/threonine-protein phosphatase PP1-beta catalytic subunit	1	IVQMTEAEVR	IVQMTEAEVR	2	IVQMTEAEVR2	187493	161387	171257
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	IVQNAVIQTIGFFGSNLPDYQR	IVQNAVIQTIGFFGSNLPDYQR	3	IVQNAVIQTIGFFGSNLPDYQR3	10184.3	11239.5	6742.17
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	IVQQLDFEK	IVQQLDFEK	2	IVQQLDFEK2	65207.4	85013.3	68342.1
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	IVQQLDFEKK	IVQQLDFEKK	3	IVQQLDFEKK3	11532	11893.7	8580.12
B1WC91	B1WC91	B1WC91_RAT	C1qtnf3	C1q and TNF related 3	1	IVQSHQQTGR	IVQSHQQTGR	3	IVQSHQQTGR3			40146.8
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	IVQTCNEPLASTNNVNK	IVQTC(UniMod:4)NEPLASTNNVNK	2	IVQTC(UniMod:4)NEPLASTNNVNK2	43279.1	34869.5	34225.3
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	IVQTCNEPLASTNNVNK	IVQTC(UniMod:4)NEPLASTNNVNK	3	IVQTC(UniMod:4)NEPLASTNNVNK3	35890.4	34212.1	37857
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	IVQTYHVNMAGTNPYTTITPQEINGK	IVQTYHVNMAGTNPYTTITPQEINGK	3	IVQTYHVNMAGTNPYTTITPQEINGK3	947830	1.25234e+06	1.11857e+06
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	IVQTYHVNMAGTNPYTTITPQEINGK	IVQTYHVNMAGTNPYTTITPQEINGK	4	IVQTYHVNMAGTNPYTTITPQEINGK4	58998.9	68797.3	52756
P83953	Q56R16;P83953;A0A0G2JZS1	IMA5_RAT	Kpna1	Importin subunit alpha-5	0	IVQVALNGLENILR	IVQVALNGLENILR	2	IVQVALNGLENILR2	45564.7	43172.1	20420.9
P83953	Q56R16;P83953;A0A0G2JZS1	IMA5_RAT	Kpna1	Importin subunit alpha-5	0	IVQVALNGLENILR	IVQVALNGLENILR	3	IVQVALNGLENILR3	9093.96	10680	3806.95
A0A8I6A8Q1	A0A8I6A8Q1	A0A8I6A8Q1_RAT	A2ml1	Alpha-2-macroglobulin-like 1	1	IVQWLAQR	IVQWLAQR	2	IVQWLAQR2	21736.9	15286.2	13495.2
P08650	P08650	CO5_RAT	C5	Complement C5	1	IVQYGTK	IVQYGTK	1	IVQYGTK1	7669.07	2698.2	5614.27
P08650	P08650	CO5_RAT	C5	Complement C5	1	IVQYGTK	IVQYGTK	2	IVQYGTK2	1.5476e+06	1.3292e+06	1.22561e+06
F1M4J1	F1M4J1	F1M4J1_RAT	LOC100294508	Dyslexia susceptibility 2-like	1	IVQYHWEELK	IVQYHWEELK	3	IVQYHWEELK3	7133.08	3618.8	
Q62760	Q62760	TOM20_RAT	Tomm20	Mitochondrial import receptor subunit TOM20 homolog	1	IVSAQSLAEDDVE	IVSAQSLAEDDVE	2	IVSAQSLAEDDVE2	3564.06	6724.96	9447.85
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	IVSCGNAIIAEVLR	IVSC(UniMod:4)GNAIIAEVLR	2	IVSC(UniMod:4)GNAIIAEVLR2	4163.8	4007.87	3917.03
P63144	P63144	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	1	IVSEEGRK	IVSEEGRK	2	IVSEEGRK2			35296.4
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	IVSEQLQR	IVSEQLQR	2	IVSEQLQR2	24127.2	23542.9	22036.9
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	IVSGAAEPDQEYYFGQVVR	IVSGAAEPDQEYYFGQVVR	3	IVSGAAEPDQEYYFGQVVR3	105923	99986.1	88389.4
A0A8I6GIW9	F1LMH8;A0A8I6GIW9	A0A8I6GIW9_RAT	Fbxw11	F-box and WD repeat domain containing 11	0	IVSGAYDGK	IVSGAYDGK	2	IVSGAYDGK2	6009.58	7274.95	
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	IVSGEAQTVHVTPENLQDFVGKPVFTVER	IVSGEAQTVHVTPENLQDFVGKPVFTVER	4	IVSGEAQTVHVTPENLQDFVGKPVFTVER4	32561.7	27901.5	36151.3
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	IVSGIIHHTQSPK	IVSGIIHHTQSPK	2	IVSGIIHHTQSPK2	1916.99	842.672	
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	IVSGIIHHTQSPK	IVSGIIHHTQSPK	3	IVSGIIHHTQSPK3	57491.2	47812	46506.6
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	IVSLDGEER	IVSLDGEER	2	IVSLDGEER2	66557.7	85039.4	66257
P81795	C9WPN6;P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	0	IVSLFAEHNDLQYAAPGGLIGVGTK	IVSLFAEHNDLQYAAPGGLIGVGTK	3	IVSLFAEHNDLQYAAPGGLIGVGTK3	266223	287510	298017
P81795	C9WPN6;P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	0	IVSLFAEHNDLQYAAPGGLIGVGTK	IVSLFAEHNDLQYAAPGGLIGVGTK	4	IVSLFAEHNDLQYAAPGGLIGVGTK4	13150.7	19346.1	16692.5
D3ZKT0	D3ZKT0	TAM41_RAT	Tamm41	Phosphatidate cytidylyltransferase, mitochondrial	1	IVSMNESTVLR	IVSMNESTVLR	2	IVSMNESTVLR2	20321.6	6214.47	
P04797	A0A0G2K7M1;F1LUV3;M0R660;E9PTN6;A0A8I6A1X7;D3ZWV2;E9PTV9;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	IVSNASCTTNCLAPLAK	IVSNASC(UniMod:4)TTNC(UniMod:4)LAPLAK	2	IVSNASC(UniMod:4)TTNC(UniMod:4)LAPLAK2	1.46564e+06	1.28783e+06	1.09367e+06
P04797	A0A0G2K7M1;F1LUV3;M0R660;E9PTN6;A0A8I6A1X7;D3ZWV2;E9PTV9;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	IVSNASCTTNCLAPLAK	IVSNASC(UniMod:4)TTNC(UniMod:4)LAPLAK	3	IVSNASC(UniMod:4)TTNC(UniMod:4)LAPLAK3	325693	621118	605046
Q0H8B9	Q0H8B9	CL2DB_RAT	Clec2d11	C-type lectin domain family 2 member D11	1	IVSPESPAK	IVSPESPAK	2	IVSPESPAK2	27584.7	18532.7	18812.5
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	IVSPSGAAVPCK	IVSPSGAAVPC(UniMod:4)K	2	IVSPSGAAVPC(UniMod:4)K2	7.32921e+06	7.65691e+06	8.06741e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	IVSPSGAAVPCK	IVSPSGAAVPC(UniMod:4)K	3	IVSPSGAAVPC(UniMod:4)K3	68706.5	50184.9	60610.1
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	IVSPSGAAVPCKVEPGLGADNSVVR	IVSPSGAAVPC(UniMod:4)KVEPGLGADNSVVR	3	IVSPSGAAVPC(UniMod:4)KVEPGLGADNSVVR3	5802.28	14540.4	7352.81
F1LYX9	F1LYX9	F1LYX9_RAT	Dsg2	Desmoglein 2	1	IVSQEPANTPVFYLNK	IVSQEPANTPVFYLNK	2	IVSQEPANTPVFYLNK2	49909	45056.5	38647.6
F1LYX9	F1LYX9	F1LYX9_RAT	Dsg2	Desmoglein 2	1	IVSQEPANTPVFYLNK	IVSQEPANTPVFYLNK	3	IVSQEPANTPVFYLNK3	20224.3	25488	31493.5
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	IVSQLLTLMDGLK	IVSQLLTLMDGLK	2	IVSQLLTLMDGLK2	247563	267224	265043
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	IVSQLLTLMDGLK	IVSQLLTLMDGLK	3	IVSQLLTLMDGLK3	60294.1	74798.2	59422
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	IVSRPEELREDDVGTGAGLLEIK	IVSRPEELREDDVGTGAGLLEIK	3	IVSRPEELREDDVGTGAGLLEIK3	20037.8	15947.3	20596.4
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	IVSRPEELREDDVGTGAGLLEIK	IVSRPEELREDDVGTGAGLLEIK	4	IVSRPEELREDDVGTGAGLLEIK4	279421	255419	243233
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	IVSSNDVGHDEYSTQSLVK	IVSSNDVGHDEYSTQSLVK	3	IVSSNDVGHDEYSTQSLVK3	1.56254e+06	1.73585e+06	1.81977e+06
Q5M9G8	Q5M9G8	DCA11_RAT	Dcaf11	DDB1- and CUL4-associated factor 11	1	IVSSSWDGSLR	IVSSSWDGSLR	2	IVSSSWDGSLR2	18038.1	21439.7	22483.6
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	IVSTSLDCLQK	IVSTSLDC(UniMod:4)LQK	2	IVSTSLDC(UniMod:4)LQK2	22635.8	29994.5	9504.62
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	IVTAQENGK	IVTAQENGK	2	IVTAQENGK2	25878.7		
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	IVTAQENGKAPDVQTVAGEVMGPQR	IVTAQENGKAPDVQTVAGEVMGPQR	3	IVTAQENGKAPDVQTVAGEVMGPQR3	5420.1	3698.62	2142.76
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	IVTAQENGKAPDVQTVAGEVMGPQRPR	IVTAQENGKAPDVQTVAGEVMGPQRPR	4	IVTAQENGKAPDVQTVAGEVMGPQRPR4	95227.9	99357.4	92995.1
Q99PD4	Q99PD4	ARC1A_RAT	Arpc1a	Actin-related protein 2/3 complex subunit 1A	1	IVTCGADR	IVTC(UniMod:4)GADR	2	IVTC(UniMod:4)GADR2	164290	177055	195019
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	IVTCGTDR	IVTC(UniMod:4)GTDR	2	IVTC(UniMod:4)GTDR2	1.16423e+06	1.09381e+06	1.34912e+06
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	IVTDSDSK	IVTDSDSK	2	IVTDSDSK2			35854.5
Q9R0I6	Q9R0I6	XIAP_RAT	Xiap	E3 ubiquitin-protein ligase XIAP	1	IVTFGTWLYSVNK	IVTFGTWLYSVNK	2	IVTFGTWLYSVNK2		4646.97	3396.26
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	IVTFIPFYMIK	IVTFIPFYMIK	2	IVTFIPFYMIK2	10278.5	8933.83	9712.38
D4ADT7	D4ADT7	D4ADT7_RAT	Nod1	Nucleotide-binding oligomerization domain containing 1	1	IVTFLGLYNNQITDIGAR	IVTFLGLYNNQITDIGAR	3	IVTFLGLYNNQITDIGAR3	5396.12	4468.57	
A0A8I5ZKU9	A0A8I5ZKU9	A0A8I5ZKU9_RAT	Shmt1	Serine hydroxymethyltransferase	1	IVTGGSDNHLILMDLRPK	IVTGGSDNHLILMDLRPK	4	IVTGGSDNHLILMDLRPK4	4546.55	6740.97	1433.92
F1M943	F1M943	F1M943_RAT	Armc8	Armadillo repeat-containing protein 8	1	IVTGLSESSVK	IVTGLSESSVK	2	IVTGLSESSVK2	13093.6	19769.6	17038.9
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	IVTLEEEPVK	IVTLEEEPVK	2	IVTLEEEPVK2	38779.9	37752	49387.3
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	IVTLTPFCTVANK	IVTLTPFC(UniMod:4)TVANK	2	IVTLTPFC(UniMod:4)TVANK2	11222.9	18003.8	12483.4
P58775	P58775	TPM2_RAT	Tpm2	Tropomyosin beta chain	1	IVTNNLK	IVTNNLK	2	IVTNNLK2	55236.4	44503.7	54027.3
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	IVTPVGQPESINLK	IVTPVGQPESINLK	2	IVTPVGQPESINLK2	14402.6	14818	9454.12
P97546	P97546	NPTN_RAT	Nptn	Neuroplastin	1	IVTSEEVIIR	IVTSEEVIIR	2	IVTSEEVIIR2	38531.9	27974.2	26835.3
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	IVTSLEWR	IVTSLEWR	2	IVTSLEWR2	708310	525502	881842
Q9R1T3	Q9R1T3	CATZ_RAT	Ctsz	Cathepsin Z	1	IVTSTYK	IVTSTYK	2	IVTSTYK2	135952	133670	140394
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	IVTTYIR	IVTTYIR	2	IVTTYIR2	252641	232586	240650
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	IVTVVPQDTK	IVTVVPQDTK	2	IVTVVPQDTK2	28450.7	23924.6	18001.4
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	IVVCTACNNGSSSVISK	IVVC(UniMod:4)TAC(UniMod:4)NNGSSSVISK	2	IVVC(UniMod:4)TAC(UniMod:4)NNGSSSVISK2	3744.86	854.642	1562.39
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	IVVCTACNNGSSSVISK	IVVC(UniMod:4)TAC(UniMod:4)NNGSSSVISK	3	IVVC(UniMod:4)TAC(UniMod:4)NNGSSSVISK3	1945.64		
P55280	P55280	CADH6_RAT	Cdh6	Cadherin-6	1	IVVDDVDEPPVFSK	IVVDDVDEPPVFSK	2	IVVDDVDEPPVFSK2	17233.1	16716.2	16954.4
A0A0G2K0I6	A0A0G2K0I6	A0A0G2K0I6_RAT	Cdh5	Cadherin 5	1	IVVEAQDAQGLR	IVVEAQDAQGLR	2	IVVEAQDAQGLR2	44830.8	40700.6	37771
A0A0G2JZH8	A0A0G2JZH8	A0A0G2JZH8_RAT	Pdhx	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	IVVEEGAK	IVVEEGAK	2	IVVEEGAK2	64838.7	48937.6	59657
Q9Z142	Q9Z142	TMM33_RAT	Tmem33	Transmembrane protein 33	1	IVVEHIIMKPSCPLFVR	IVVEHIIMKPSC(UniMod:4)PLFVR	3	IVVEHIIMKPSC(UniMod:4)PLFVR3	9637.23	6851.99	7250.76
Q9Z142	Q9Z142	TMM33_RAT	Tmem33	Transmembrane protein 33	1	IVVEHIIMKPSCPLFVR	IVVEHIIMKPSC(UniMod:4)PLFVR	4	IVVEHIIMKPSC(UniMod:4)PLFVR4	13673.3	7208.59	11983.5
P58751	P58751	RELN_RAT	Reln	Reelin	1	IVVGCEATSCGDLHSVMLEYTK	IVVGC(UniMod:4)EATSC(UniMod:4)GDLHSVMLEYTK	3	IVVGC(UniMod:4)EATSC(UniMod:4)GDLHSVMLEYTK3	64159	51760.3	64780.8
Q5XXR3	Q5XXR3	ARHG6_RAT	Arhgef6	Rho guanine nucleotide exchange factor 6	1	IVVHCNNNQDFQEWMEQLNR	IVVHC(UniMod:4)NNNQDFQEWMEQLNR	3	IVVHC(UniMod:4)NNNQDFQEWMEQLNR3	2432.3	4763.61	3547.38
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	IVVHLAHALK	IVVHLAHALK	2	IVVHLAHALK2	2707.4	7857.45	6076.62
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	IVVLAKPEHENR	IVVLAKPEHENR	3	IVVLAKPEHENR3	22878.7	13832.4	7125.44
Q9WTT7	Q6P7P5;Q9WTT7	5MP1_RAT	Bzw2	eIF5-mimic protein 1	0	IVVLFYK	IVVLFYK	2	IVVLFYK2	126508	136543	112281
P51158	P51158	RAB28_RAT	Rab28	Ras-related protein Rab-28	1	IVVLGDGTSGK	IVVLGDGTSGK	2	IVVLGDGTSGK2	37982.3	31703	31918.7
Q63797	Q63797	PSME1_RAT	Psme1	Proteasome activator complex subunit 1	1	IVVLLQR	IVVLLQR	2	IVVLLQR2	273005	222973	225688
Q5CZZ9	Q5CZZ9	PI51B_RAT	Pip5k1b	Phosphatidylinositol 4-phosphate 5-kinase type-1 beta	1	IVVMNNVLPR	IVVMNNVLPR	2	IVVMNNVLPR2	5434.35	7259.29	6915.83
P62246	D3ZLL8;P62246;A0A0G2JYA6	RS15A_RAT	Rps15a	Small ribosomal subunit protein uS8	0	IVVNLTGR	IVVNLTGR	2	IVVNLTGR2	32248.7	27978.3	28228.3
G3V6G1	G3V6G1	G3V6G1_RAT	Jchain	Joining chain of multimeric IgA and IgM	1	IVVPLNNR	IVVPLNNR	2	IVVPLNNR2	5.59774e+06	4.68277e+06	4.95005e+06
A0A096MKE2	A0A096MKE2	A0A096MKE2_RAT	Snx12	PX domain-containing protein	1	IVVPPLPGK	IVVPPLPGK	2	IVVPPLPGK2	10803.1	6367.22	8253.08
P09456	P09456	KAP0_RAT	Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit	1	IVVQGEPGDEFFIILEGTAAVLQR	IVVQGEPGDEFFIILEGTAAVLQR	3	IVVQGEPGDEFFIILEGTAAVLQR3	7111.33	3183.99	
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	IVVQVWPFLGQYMEK	IVVQVWPFLGQYMEK	2	IVVQVWPFLGQYMEK2	165826	147295	151095
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	IVVQVWPFLGQYMEK	IVVQVWPFLGQYMEK	3	IVVQVWPFLGQYMEK3	37069	28283.9	33011.2
Q4KM98	Q4KM98	MFF_RAT	Mff	Mitochondrial fission factor	1	IVVTGNNEDISFSR	IVVTGNNEDISFSR	2	IVVTGNNEDISFSR2	20678.9	12755	10666.1
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	IVVVAEQRPDASEEDSFQWMSR	IVVVAEQRPDASEEDSFQWMSR	3	IVVVAEQRPDASEEDSFQWMSR3	2870.78		
P42123	P42123	LDHB_RAT	Ldhb	L-lactate dehydrogenase B chain	1	IVVVTAGVR	IVVVTAGVR	2	IVVVTAGVR2	31201.3	17711.7	19505.9
Q6IRK9	Q6IRK9	CBPQ_RAT	Cpq	Carboxypeptidase Q	1	IVVYNQPYTDYGK	IVVYNQPYTDYGK	2	IVVYNQPYTDYGK2	62902.7	61143.3	51197.1
D3ZWA1	D3ZWA1	D3ZWA1_RAT	Mindy2	Ubiquitin carboxyl-terminal hydrolase	1	IVWESLHNVDGDGNFCDSEFR	IVWESLHNVDGDGNFC(UniMod:4)DSEFR	3	IVWESLHNVDGDGNFC(UniMod:4)DSEFR3	8945.94	23047	11542.5
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	IVYAPPKDPTKPK	IVYAPPKDPTKPK	3	IVYAPPKDPTKPK3	67799.7	59126.4	64565
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	IVYEGPELNHAFGLCHHGNYLFWTEYR	IVYEGPELNHAFGLC(UniMod:4)HHGNYLFWTEYR	4	IVYEGPELNHAFGLC(UniMod:4)HHGNYLFWTEYR4	10717.4	5925.23	2986.82
F1MAF8	F1MAF8	F1MAF8_RAT	Atg2b	Autophagy related 2B	1	IVYEPHPQLTR	IVYEPHPQLTR	3	IVYEPHPQLTR3	17276	24439.5	20455
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	IVYFILSR	IVYFILSR	2	IVYFILSR2	645276	638319	611204
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	IVYGHLDDPANQEIER	IVYGHLDDPANQEIER	2	IVYGHLDDPANQEIER2	13712.4	10526.8	6693.22
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	IVYGHLDDPANQEIER	IVYGHLDDPANQEIER	3	IVYGHLDDPANQEIER3	187253	177066	200263
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	IVYICCGEDHTAALTK	IVYIC(UniMod:4)C(UniMod:4)GEDHTAALTK	3	IVYIC(UniMod:4)C(UniMod:4)GEDHTAALTK3	43227.3	34387.3	29674.2
Q9JHW5	Q9JHW5	VAMP7_RAT	Vamp7	Vesicle-associated membrane protein 7	1	IVYLCITDDDFER	IVYLC(UniMod:4)ITDDDFER	2	IVYLC(UniMod:4)ITDDDFER2	20253.2	12509.2	15937.6
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	IVYLQYPCLAPHHQCSQLCLYDWYTK	IVYLQYPC(UniMod:4)LAPHHQC(UniMod:4)SQLC(UniMod:4)LYDWYTK	4	IVYLQYPC(UniMod:4)LAPHHQC(UniMod:4)SQLC(UniMod:4)LYDWYTK4	38512.3	30560.9	29793.7
D4A4W9	P11250;D4A4W9	D4A4W9_RAT	Rpl34-ps1	60S ribosomal protein L34	0	IVYLYTK	IVYLYTK	2	IVYLYTK2	60480.4	71049.2	59204
Q99MZ8	Q99MZ8	LASP1_RAT	Lasp1	LIM and SH3 domain protein 1	1	IVYPTEK	IVYPTEK	1	IVYPTEK1	12490.8		10368.1
Q99MZ8	Q99MZ8	LASP1_RAT	Lasp1	LIM and SH3 domain protein 1	1	IVYPTEK	IVYPTEK	2	IVYPTEK2	780209	588918	618620
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	IVYREYEPYFK	IVYREYEPYFK	3	IVYREYEPYFK3	70306.7	38956.2	94238.3
D4AD75	D4AD75	D4AD75_RAT	Dpy19l1	Dpy-19 like C-mannosyltransferase 1	1	IVYSMYSR	IVYSMYSR	2	IVYSMYSR2	26185.1	21279.7	15367.5
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	IVYTSADGTEINEVEVDPITTFPLK	IVYTSADGTEINEVEVDPITTFPLK	3	IVYTSADGTEINEVEVDPITTFPLK3	7595.37	8754.96	12190.8
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	IVYVAPMK	IVYVAPMK	2	IVYVAPMK2	45145.9	50398.2	36899
P23606	P23606	TGM1_RAT	Tgm1	Protein-glutamine gamma-glutamyltransferase K	1	IVYVEEK	IVYVEEK	2	IVYVEEK2	16147.9	13026.1	4763.27
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	IWAAAPNR	IWAAAPNR	2	IWAAAPNR2	115367	127476	106970
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	IWAHEALR	IWAHEALR	2	IWAHEALR2	15243.4	15809.2	14094.4
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	IWALGGVTADR	IWALGGVTADR	2	IWALGGVTADR2	46477.9	41498.3	38971.5
Q5U2M6	Q5U2M6	DCAF8_RAT	Dcaf8	DDB1- and CUL4-associated factor 8	1	IWAPTAEASTELTGLK	IWAPTAEASTELTGLK	2	IWAPTAEASTELTGLK2	2492.09	1516.23	
G3V6Q3	G3V6Q3	G3V6Q3_RAT	Wdr13	Uncharacterized protein	1	IWASEDGR	IWASEDGR	2	IWASEDGR2		23303.7	28306.2
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	IWATYQTMLDK	IWATYQTMLDK	2	IWATYQTMLDK2	38102.6	44761.4	30750.8
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	IWCFGPDGTGPNILTDITK	IWC(UniMod:4)FGPDGTGPNILTDITK	3	IWC(UniMod:4)FGPDGTGPNILTDITK3	3629.22		
Q63604	Q63604	NTRK2_RAT	Ntrk2	BDNF/NT-3 growth factors receptor	1	IWCTEPSPGIVAFPR	IWC(UniMod:4)TEPSPGIVAFPR	2	IWC(UniMod:4)TEPSPGIVAFPR2	12340.5	11265.9	8224.4
Q66HA6	Q66HA6	ARL8B_RAT	Arl8b	ADP-ribosylation factor-like protein 8B	1	IWDIGGQPR	IWDIGGQPR	2	IWDIGGQPR2	244510	234314	
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	IWDLADPEGK	IWDLADPEGK	2	IWDLADPEGK2	9724.87	7272.5	4529.48
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	IWDLADTDGK	IWDLADTDGK	2	IWDLADTDGK2	109710	107132	94071.6
Q4QR85	Q4QR85	MEP50_RAT	Wdr77	Methylosome protein WDR77	1	IWDLAQQMSLNSYR	IWDLAQQMSLNSYR	2	IWDLAQQMSLNSYR2	17577.5	20133.7	21441.9
Q4QR85	Q4QR85	MEP50_RAT	Wdr77	Methylosome protein WDR77	1	IWDLAQQMSLNSYR	IWDLAQQMSLNSYR	3	IWDLAQQMSLNSYR3	6992.91	2519.45	7518.64
P63245	P63245	RACK1_RAT	Rack1	Small ribosomal subunit protein RACK1	1	IWDLEGK	IWDLEGK	2	IWDLEGK2			53992.7
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	IWDLQAGTEQLR	IWDLQAGTEQLR	2	IWDLQAGTEQLR2	117415	103066	93177.8
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	IWDLQAGTEQLR	IWDLQAGTEQLR	3	IWDLQAGTEQLR3	3316.23	4082.05	2855.66
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	IWDPIHR	IWDPIHR	2	IWDPIHR2	40296.5	31879.5	32327.7
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	IWDSGTGK	IWDSGTGK	2	IWDSGTGK2	14469.4	18436.8	13897.6
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	IWDSVTLNTLHVIGIGFFDR	IWDSVTLNTLHVIGIGFFDR	3	IWDSVTLNTLHVIGIGFFDR3	3836.21	2654.83	
P01026	P01026	CO3_RAT	C3	Complement C3	1	IWDVVEK	IWDVVEK	1	IWDVVEK1	23683.5	23192.8	21441.2
P01026	P01026	CO3_RAT	C3	Complement C3	1	IWDVVEK	IWDVVEK	2	IWDVVEK2	5.34102e+06	4.92432e+06	5.01415e+06
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	IWEPTYTIMYR	IWEPTYTIMYR	2	IWEPTYTIMYR2	33797.5	32996.4	23043.2
A0A8I6A263	A0A8I6A263	A0A8I6A263_RAT	Aimp1	Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	1	IWEQIQPDLHTNDECVATYK	IWEQIQPDLHTNDEC(UniMod:4)VATYK	3	IWEQIQPDLHTNDEC(UniMod:4)VATYK3	32124.6	26168.1	45401.5
Q5U2P0	Q5U2P0	DI3L1_RAT	Dis3l	DIS3-like exonuclease 1	1	IWESFPHQALLR	IWESFPHQALLR	3	IWESFPHQALLR3	2796.82	2271.75	
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	IWEVIGDHFNK	IWEVIGDHFNK	2	IWEVIGDHFNK2	5170.38		12067.2
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	IWEVIGDHFNK	IWEVIGDHFNK	3	IWEVIGDHFNK3	18005	25109.1	20595.2
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	IWEWLVGVACR	IWEWLVGVAC(UniMod:4)R	2	IWEWLVGVAC(UniMod:4)R2	22345.6	24795.7	26493.5
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	IWFDKFK	IWFDKFK	2	IWFDKFK2	18173.2	22649.3	19689.2
Q6P799	Q6P799	SYSC_RAT	Sars1	Serine--tRNA ligase, cytoplasmic	1	IWGDCTVR	IWGDC(UniMod:4)TVR	2	IWGDC(UniMod:4)TVR2	41564.9	33086.5	40608.6
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	IWGNVTR	IWGNVTR	2	IWGNVTR2	230306	262414	238232
Q5M7T1	Q5M7T1	CIAO1_RAT	Ciao1	Probable cytosolic iron-sulfur protein assembly protein CIAO1	1	IWGTEGDSWICK	IWGTEGDSWIC(UniMod:4)K	2	IWGTEGDSWIC(UniMod:4)K2	45511.1	62040.8	51879
P63269	P63269;P62738	ACTH_RAT	Actg2	Actin, gamma-enteric smooth muscle	0	IWHHSFYNELR	IWHHSFYNELR	3	IWHHSFYNELR3	3988.76	3752.2	2365.15
P68136	P60711;P63259;P68136;P68035	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	IWHHTFYNELR	IWHHTFYNELR	2	IWHHTFYNELR2	2.00081e+06	1.79297e+06	1.5054e+06
P68136	P60711;P63259;P68136;P68035	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	IWHHTFYNELR	IWHHTFYNELR	3	IWHHTFYNELR3	1.16869e+07	371987	1.17175e+07
Q5U203	Q5U203	UBE2F_RAT	Ube2f	NEDD8-conjugating enzyme UBE2F	1	IWHPNITETGEICLSLLR	IWHPNITETGEIC(UniMod:4)LSLLR	3	IWHPNITETGEIC(UniMod:4)LSLLR3	2491.35		1843.02
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	IWHSSTYR	IWHSSTYR	2	IWHSSTYR2	44186.4	29211.4	40847.3
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	IWHVIGDHFNK	IWHVIGDHFNK	2	IWHVIGDHFNK2	42739.9	23893.9	30792.8
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	IWHVIGDHFNK	IWHVIGDHFNK	3	IWHVIGDHFNK3	10145.9	6340.19	7111.16
D3ZUV3	D3ZUV3	D3ZUV3_RAT	Eif2a	Eukaryotic translation initiation factor 2A	1	IWHYTGSLLYK	IWHYTGSLLYK	3	IWHYTGSLLYK3	3631.96	3067.08	5688.01
Q99MM4	Q99MM4	TRAD1_RAT	Trafd1	TRAF-type zinc finger domain-containing protein 1	1	IWIASQLLR	IWIASQLLR	2	IWIASQLLR2	14282.5		8859.27
A0A8I5ZXX6	A0A1B0GWR9;A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	0	IWILTGDK	IWILTGDK	2	IWILTGDK2	120664	115690	124090
Q63100	Q63100	DC1I1_RAT	Dync1i1	Cytoplasmic dynein 1 intermediate chain 1	1	IWIYDVGELAVPHNDEWTR	IWIYDVGELAVPHNDEWTR	3	IWIYDVGELAVPHNDEWTR3	11603.3	15578.9	4163.66
B2GUY0	B2GUY0	MA1B1_RAT	Man1b1	Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase	1	IWKEPAPPNER	IWKEPAPPNER	3	IWKEPAPPNER3	21687.3	15381.7	15649.3
A0A8I6ASK6	A0A8I6ASK6	A0A8I6ASK6_RAT	Fcrl1	Fc receptor-like 1	1	IWLDDVSCSGK	IWLDDVSC(UniMod:4)SGK	2	IWLDDVSC(UniMod:4)SGK2	3.26978e+06	3.00152e+06	3.39063e+06
A0A8I6ASK6	A0A8I6ASK6	A0A8I6ASK6_RAT	Fcrl1	Fc receptor-like 1	1	IWLDDVSCSGKEESLELCR	IWLDDVSC(UniMod:4)SGKEESLELC(UniMod:4)R	3	IWLDDVSC(UniMod:4)SGKEESLELC(UniMod:4)R3		6980.02	4637.27
D3ZP82	D3ZP82	D3ZP82_RAT	Loxl3	Lysyl oxidase homolog	1	IWLDNLSCK	IWLDNLSC(UniMod:4)K	2	IWLDNLSC(UniMod:4)K2	13876.1	14801.3	17684.1
F1LVT9	A0A8I5ZSB0;F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	0	IWLEALK	IWLEALK	2	IWLEALK2	167212	172099	178427
A0A0G2K7G2	A0A0G2K7G2	A0A0G2K7G2_RAT	Agfg2	ArfGAP with FG repeats 2	1	IWLGLFDAR	IWLGLFDAR	2	IWLGLFDAR2	15899.9	11617.1	16230.8
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	IWLVDSK	IWLVDSK	2	IWLVDSK2	49822.6	51319.6	78737.1
P32198	P32198	CPT1A_RAT	Cpt1a	Carnitine O-palmitoyltransferase 1, liver isoform	1	IWMAMVK	IWMAMVK	2	IWMAMVK2	42945.6	43978.3	43183.3
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	IWMLEMK	IWMLEMK	2	IWMLEMK2	86063.4	80148.4	95276.9
D4ABB8	D4ABB8;D3ZN41	ATP9B_RAT	Atp9b	Probable phospholipid-transporting ATPase IIB	0	IWMLTGDK	IWMLTGDK	2	IWMLTGDK2	9422.17	12599.3	4784.41
A0A0G2K687	A0A0G2K687	A0A0G2K687_RAT	Rubcn	Rubicon autophagy regulator	1	IWNDPLFNVQDINSALYR	IWNDPLFNVQDINSALYR	3	IWNDPLFNVQDINSALYR3	3809.48		3524.55
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	IWNVHSVLNVLHSLVDK	IWNVHSVLNVLHSLVDK	3	IWNVHSVLNVLHSLVDK3	31031.5	19123.2	26950.5
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	IWNVHSVLNVLHSLVDK	IWNVHSVLNVLHSLVDK	4	IWNVHSVLNVLHSLVDK4	65040.9	44378.5	39956.3
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	IWNVHSVLNVLHSLVDKSNINR	IWNVHSVLNVLHSLVDKSNINR	4	IWNVHSVLNVLHSLVDKSNINR4	3320.28		
B2GV94	B2GV94	B2GV94_RAT	Retreg3	Fam134c protein	1	IWPEINVPRPDALDNESWGFVHPR	IWPEINVPRPDALDNESWGFVHPR	4	IWPEINVPRPDALDNESWGFVHPR4	7822.05	22043.4	13023.3
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	IWQDVQLK	IWQDVQLK	2	IWQDVQLK2	18030.2	24304.2	19893
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	IWQEEVSR	IWQEEVSR	2	IWQEEVSR2	56838.4	59664.2	58874.9
D3ZTN1	D3ZTN1	D3ZTN1_RAT	Tesc	Tescalcin	1	IWQGIDIETK	IWQGIDIETK	2	IWQGIDIETK2	81843.9	100783	91063.4
P85515	F7F067;P85515	ACTZ_RAT	Actr1a	Alpha-centractin	0	IWQYVYSK	IWQYVYSK	2	IWQYVYSK2	515282	486801	590024
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	IWSFELPSPLHELK	IWSFELPSPLHELK	3	IWSFELPSPLHELK3	15435.9	8572.42	17333.2
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	IWSLSTFSLLHTFINEHAR	IWSLSTFSLLHTFINEHAR	4	IWSLSTFSLLHTFINEHAR4	2564.17	2702.63	2312.23
Q5XIC4	Q5XIC4	SPG21_RAT	Spg21	Maspardin	1	IWSLYDAGPR	IWSLYDAGPR	2	IWSLYDAGPR2	71112.1	66760.9	67478.8
B5DF93	B5DF93	PATL1_RAT	Patl1	Protein PAT1 homolog 1	1	IWSMYDNLR	IWSMYDNLR	2	IWSMYDNLR2	21769	25540.2	23763.5
A0A8I5ZQH9	A0A8I5ZQH9	A0A8I5ZQH9_RAT	Dcaf6	DDB1 and CUL4 associated factor 6	1	IWSPLEESR	IWSPLEESR	2	IWSPLEESR2		10160.8	17805.1
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	IWSPLVTEEGK	IWSPLVTEEGK	2	IWSPLVTEEGK2	1.00415e+06	939980	1.03709e+06
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	IWSPLVTEEGKR	IWSPLVTEEGKR	3	IWSPLVTEEGKR3	37930.5	42369.7	39310.2
P24473	P24473	GSTK1_RAT	Gstk1	Glutathione S-transferase kappa 1	1	IWSRDEDITESQNILSAAEK	IWSRDEDITESQNILSAAEK	3	IWSRDEDITESQNILSAAEK3	44170.5	44658	52099.7
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	IWSTYLEAIMK	IWSTYLEAIMK	2	IWSTYLEAIMK2	37264.2	42655.2	20591.6
Q8R4A1	Q8R4A1	ERO1A_RAT	Ero1a	ERO1-like protein alpha	1	IWSVIYEENCFKPQTIQRPLASGQGK	IWSVIYEENC(UniMod:4)FKPQTIQRPLASGQGK	4	IWSVIYEENC(UniMod:4)FKPQTIQRPLASGQGK4	19731.7	8620.68	8957.45
Q9JMJ4	Q9JMJ4	PRP19_RAT	Prpf19	Pre-mRNA-processing factor 19	1	IWSVPNTSCVQVVR	IWSVPNTSC(UniMod:4)VQVVR	2	IWSVPNTSC(UniMod:4)VQVVR2	3826.69	5519.45	
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	IWTAHYDPNHCFIETR	IWTAHYDPNHC(UniMod:4)FIETR	3	IWTAHYDPNHC(UniMod:4)FIETR3	13782	15352	10371.8
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	IWTAHYDPNHCFIETR	IWTAHYDPNHC(UniMod:4)FIETR	4	IWTAHYDPNHC(UniMod:4)FIETR4	65617.4	73070.9	72270.3
D3ZFK6	D3ZFK6	D3ZFK6_RAT	Atg16l1	Autophagy related 16-like 1	1	IWTVDDYR	IWTVDDYR	2	IWTVDDYR2	7319.43	6594.04	7024.45
A0A8I6ADA8	A0A8I6ADA8	A0A8I6ADA8_RAT	Abhd4	Abhydrolase domain containing 4, N-acyl phospholipase B	1	IWTVTVSPEQK	IWTVTVSPEQK	2	IWTVTVSPEQK2	14588	16085.2	20046.6
D3ZRN3	D3ZRN3	D3ZRN3_RAT	Actbl2	Actin, beta-like 2	1	IWYHTFYNELR	IWYHTFYNELR	2	IWYHTFYNELR2	45661.5	95379.1	54418.3
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	IWYPPNHVFHIDESTR	IWYPPNHVFHIDESTR	3	IWYPPNHVFHIDESTR3	20722.8	18485.2	25760.4
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	IWYPPNHVFHIDESTR	IWYPPNHVFHIDESTR	4	IWYPPNHVFHIDESTR4	51715.6	56349.2	45430.4
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	IYADSLKPNIPYK	IYADSLKPNIPYK	3	IYADSLKPNIPYK3	25695	33532.1	23541.9
G3V6R7	G3V6R7	G3V6R7_RAT	Oxsm	3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial	1	IYAEVLGYGLSGDAGHITAPDPEGEGALR	IYAEVLGYGLSGDAGHITAPDPEGEGALR	3	IYAEVLGYGLSGDAGHITAPDPEGEGALR3	4787.95	2963.64	5886.25
Q63619	Q63619	COQ7_RAT	Coq7	5-demethoxyubiquinone hydroxylase, mitochondrial (Fragment)	1	IYAGQMAVLGR	IYAGQMAVLGR	2	IYAGQMAVLGR2	16612.8	11184.8	11615.7
Q62910	Q62910	SYNJ1_RAT	Synj1	Synaptojanin-1	1	IYAGTGALEGK	IYAGTGALEGK	2	IYAGTGALEGK2	2195.38	6991.08	
G3V8L0	G3V8L0	G3V8L0_RAT	Wdr24	GATOR complex protein WDR24	1	IYAIEEEQFVEK	IYAIEEEQFVEK	2	IYAIEEEQFVEK2	4070.71		5906.8
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	IYALPDDLVEVKPK	IYALPDDLVEVKPK	2	IYALPDDLVEVKPK2	18895.7	21018.3	25751.5
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	IYALPDDLVEVKPK	IYALPDDLVEVKPK	3	IYALPDDLVEVKPK3	65677.6	67558.2	57888.8
D3ZKE1	D3ZKE1	D3ZKE1_RAT	Uvrag	UV radiation resistance associated	1	IYALSENVSSFR	IYALSENVSSFR	2	IYALSENVSSFR2	6042.68	4864.31	7922.65
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	IYAMEISDNPGEHELGEPEFR	IYAMEISDNPGEHELGEPEFR	3	IYAMEISDNPGEHELGEPEFR3	16908	23389.7	20612.4
D3ZRI9	D3ZRI9	D3ZRI9_RAT	Gan	Gigaxonin	1	IYAMGGGSYGK	IYAMGGGSYGK	2	IYAMGGGSYGK2	14430.3	14586	8135.81
P54313	P54311;A0A8I6A9K0;P54313	GBB2_RAT	Gnb2	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2	0	IYAMHWGTDSR	IYAMHWGTDSR	2	IYAMHWGTDSR2	79533.8	84951.5	86752.8
P54313	P54311;A0A8I6A9K0;P54313	GBB2_RAT	Gnb2	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2	0	IYAMHWGTDSR	IYAMHWGTDSR	3	IYAMHWGTDSR3	627316	621927	632708
O35353	O35353	GBB4_RAT	Gnb4	Guanine nucleotide-binding protein subunit beta-4	1	IYAMHWGYDSR	IYAMHWGYDSR	2	IYAMHWGYDSR2	20206.9	15692.5	13279.3
O35353	O35353	GBB4_RAT	Gnb4	Guanine nucleotide-binding protein subunit beta-4	1	IYAMHWGYDSR	IYAMHWGYDSR	3	IYAMHWGYDSR3	255825	242877	239142
P62749	P84076;P62749	HPCL1_RAT	Hpcal1	Hippocalcin-like protein 1	0	IYANFFPYGDASK	IYANFFPYGDASK	2	IYANFFPYGDASK2	56853.2	57523	69857.8
Q6AYQ1	Q6AYQ1	GOGA7_RAT	Golga7	Golgin subfamily A member 7	1	IYAPQGLLLTDPIER	IYAPQGLLLTDPIER	2	IYAPQGLLLTDPIER2	27076.9	42356.2	47546.8
Q6AYQ1	Q6AYQ1	GOGA7_RAT	Golga7	Golgin subfamily A member 7	1	IYAPQGLLLTDPIER	IYAPQGLLLTDPIER	3	IYAPQGLLLTDPIER3	11212.5	18763	21730.8
A0A8I5XWD7	A0A8I5XWD7;P0C644	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	0	IYASDEGR	IYASDEGR	2	IYASDEGR2		27624.3	
Q4KM35	Q4KM35	PSB10_RAT	Psmb10	Proteasome subunit beta type-10	1	IYCCGAGVAADTEMTTR	IYC(UniMod:4)C(UniMod:4)GAGVAADTEMTTR	2	IYC(UniMod:4)C(UniMod:4)GAGVAADTEMTTR2	78698.5	82498.5	78908.8
Q4KM35	Q4KM35	PSB10_RAT	Psmb10	Proteasome subunit beta type-10	1	IYCCGAGVAADTEMTTR	IYC(UniMod:4)C(UniMod:4)GAGVAADTEMTTR	3	IYC(UniMod:4)C(UniMod:4)GAGVAADTEMTTR3	49356.6	42855.6	48641.5
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	IYCKPHFNQLFK	IYC(UniMod:4)KPHFNQLFK	3	IYC(UniMod:4)KPHFNQLFK3	27426.6	37361.1	33775.2
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	IYCKPHFNQLFK	IYC(UniMod:4)KPHFNQLFK	4	IYC(UniMod:4)KPHFNQLFK4	10052.3	5241.74	5444.84
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	IYCNALALR	IYC(UniMod:4)NALALR	2	IYC(UniMod:4)NALALR2	12046.3	17697.5	11236.7
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	IYCQITQHLLQNHMMWK	IYC(UniMod:4)QITQHLLQNHMMWK	3	IYC(UniMod:4)QITQHLLQNHMMWK3	72568.4	65030.4	70238.2
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	IYCQITQHLLQNHMMWK	IYC(UniMod:4)QITQHLLQNHMMWK	4	IYC(UniMod:4)QITQHLLQNHMMWK4	160934	189053	161329
A0A8I6AA52	A0A8I6AA52	A0A8I6AA52_RAT	Wdr48	WD repeat-containing protein 48	1	IYCTDLR	IYC(UniMod:4)TDLR	2	IYC(UniMod:4)TDLR2	32611.1	19901.5	26085.5
D3ZG88	D3ZG88	D3ZG88_RAT	Znrd2	Zinc ribbon domain containing 2	1	IYCVACQELDSDVDKDNPALNAQAALSQAR	IYC(UniMod:4)VAC(UniMod:4)QELDSDVDKDNPALNAQAALSQAR	4	IYC(UniMod:4)VAC(UniMod:4)QELDSDVDKDNPALNAQAALSQAR4	3293.81	5924.01	7563.22
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	IYDALDITLIER	IYDALDITLIER	2	IYDALDITLIER2	17118.9	18739.1	11986.4
Q4V884	Q4V884	Q4V884_RAT	Cdc16	CDC16 cell division cycle 16 homolog (S. cerevisiae)	1	IYDALDNR	IYDALDNR	2	IYDALDNR2	23526.9	18859.1	28802
D3ZWA8	D3ZWA8	D3ZWA8_RAT	Appl1	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1	1	IYDAQNELSAATHLTSK	IYDAQNELSAATHLTSK	3	IYDAQNELSAATHLTSK3	19321.9	21665.2	21005
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	IYDAVSGIDTQIVYHK	IYDAVSGIDTQIVYHK	3	IYDAVSGIDTQIVYHK3	6221.79	5186.97	6235.3
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	IYDDDFFQNLDGVANALDNVDAR	IYDDDFFQNLDGVANALDNVDAR	3	IYDDDFFQNLDGVANALDNVDAR3	45239.8	42359.5	28803.2
F1M0B5	F1M0B5	F1M0B5_RAT	Cd84	CD84 molecule	1	IYDEIPQSTMLSR	IYDEIPQSTMLSR	2	IYDEIPQSTMLSR2	539847	475785	549083
F1M0B5	F1M0B5	F1M0B5_RAT	Cd84	CD84 molecule	1	IYDEIPQSTMLSR	IYDEIPQSTMLSR	3	IYDEIPQSTMLSR3	7555.45	7846.69	
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	IYDLNIPAFVK	IYDLNIPAFVK	2	IYDLNIPAFVK2	165045	153570	174560
Q5XIG8	Q5XIG8	STRAP_RAT	Strap	Serine-threonine kinase receptor-associated protein	1	IYDLNKPEAEPK	IYDLNKPEAEPK	2	IYDLNKPEAEPK2	5824.78	3702.07	2762.39
Q5XIG8	Q5XIG8	STRAP_RAT	Strap	Serine-threonine kinase receptor-associated protein	1	IYDLNKPEAEPK	IYDLNKPEAEPK	3	IYDLNKPEAEPK3	226541	231824	220540
P63100	A0A0H2UHV6;P63100	CANB1_RAT	Ppp3r1	Calcineurin subunit B type 1	0	IYDMDKDGYISNGELFQVLK	IYDMDKDGYISNGELFQVLK	3	IYDMDKDGYISNGELFQVLK3	22384.1	20379.9	18165.9
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	IYDNLYGR	IYDNLYGR	2	IYDNLYGR2	4.42664e+06	4.75777e+06	4.9402e+06
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	IYDNLYGRK	IYDNLYGRK	2	IYDNLYGRK2	3481.97	7805.98	8781.97
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	IYDNLYGRK	IYDNLYGRK	3	IYDNLYGRK3	51633.5	54644.9	45991.5
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	IYDVEQSR	IYDVEQSR	2	IYDVEQSR2	85870.5	107338	102253
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	IYDYNSVIR	IYDYNSVIR	2	IYDYNSVIR2	38034.1	35515	61611
Q6AYK6	Q6AYK6	CYBP_RAT	Cacybp	Calcyclin-binding protein	1	IYEDGDDDMK	IYEDGDDDMK	2	IYEDGDDDMK2	54415.5	49331.1	44948.5
Q6AYK6	Q6AYK6	CYBP_RAT	Cacybp	Calcyclin-binding protein	1	IYEDGDDDMKR	IYEDGDDDMKR	3	IYEDGDDDMKR3	11486	13373.6	8683.01
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	IYEEAWTK	IYEEAWTK	2	IYEEAWTK2	49031.3	57368.7	26067.8
Q9WVC0	Q9WVC0;A0A8I5ZW51;A0A8I6ARI4	SEPT7_RAT	Septin7	Septin-7	0	IYEFPETDDEEENK	IYEFPETDDEEENK	2	IYEFPETDDEEENK2	98439.2	79638.8	96477.6
Q9WVC0	Q9WVC0;A0A8I5ZW51;A0A8I6ARI4	SEPT7_RAT	Septin7	Septin-7	0	IYEFPETDDEEENKLVK	IYEFPETDDEEENKLVK	3	IYEFPETDDEEENKLVK3	61571.4	63660.2	77034.8
D3ZLN7	D3ZLN7	D3ZLN7_RAT	Commd2	COMM domain containing 2	1	IYEGAAR	IYEGAAR	2	IYEGAAR2	17202.8	13157.4	
Q69BT7	Q69BT7	TPPC4_RAT	Trappc4	Trafficking protein particle complex subunit 4	1	IYEIYSDFALK	IYEIYSDFALK	2	IYEIYSDFALK2	14144.7	14758.7	10968
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	IYELAAGGTAVGTGLNTR	IYELAAGGTAVGTGLNTR	2	IYELAAGGTAVGTGLNTR2	43158.4	47488.5	48493.2
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	IYELAAGGTAVGTGLNTR	IYELAAGGTAVGTGLNTR	3	IYELAAGGTAVGTGLNTR3	19842	24291.5	18848.1
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	IYEPLDVK	IYEPLDVK	2	IYEPLDVK2	168430	173967	154505
Q5I0D1	Q5I0D1	GLOD4_RAT	Glod4	Glyoxalase domain-containing protein 4	1	IYEQDEEK	IYEQDEEK	2	IYEQDEEK2	11986.1	10474.6	
A0A0G2JTB2	A0A0G2JTB2	A0A0G2JTB2_RAT	Gbe1	1,4-alpha-glucan branching enzyme	1	IYESHVGISSHEGK	IYESHVGISSHEGK	3	IYESHVGISSHEGK3	15102.7	10822.7	8490.61
A0A0G2JTB2	A0A0G2JTB2	A0A0G2JTB2_RAT	Gbe1	1,4-alpha-glucan branching enzyme	1	IYESHVGISSHEGK	IYESHVGISSHEGK	4	IYESHVGISSHEGK4	1638.61	1466.52	
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	IYESIEEAK	IYESIEEAK	2	IYESIEEAK2	219980	269569	248258
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	IYFAGLPR	IYFAGLPR	1	IYFAGLPR1	12640.5		19743.6
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	IYFAGLPR	IYFAGLPR	2	IYFAGLPR2	2.89859e+07	3.47331e+07	3.28937e+07
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	IYFGGLPTLR	IYFGGLPTLR	2	IYFGGLPTLR2	75758.3	82351	80490.9
B1WBY7	B1WBY7	B1WBY7_RAT	Erlin1	Erlin	1	IYFGSNIPNMFVDSSCALK	IYFGSNIPNMFVDSSC(UniMod:4)ALK	3	IYFGSNIPNMFVDSSC(UniMod:4)ALK3	4564.4	4232.4	4070.18
Q6AY86	B1WBS4;Q6AY86	VP26A_RAT	Vps26a	Vacuolar protein sorting-associated protein 26A	0	IYFLLVR	IYFLLVR	2	IYFLLVR2	18785.4	13223.8	14073.9
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	IYFMAGSSR	IYFMAGSSR	2	IYFMAGSSR2	3.03599e+06	3.98622e+06	3.63067e+06
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	IYFMAGSSRK	IYFMAGSSRK	3	IYFMAGSSRK3	5577.58	7680.17	
O88923	O88923	AGRL2_RAT	Adgrl2	Adhesion G protein-coupled receptor L2	1	IYFMPWTPYR	IYFMPWTPYR	2	IYFMPWTPYR2	6075.04	8071.4	10385.8
Q7TP48	Q7TP48	APMAP_RAT	Apmap	Adipocyte plasma membrane-associated protein	1	IYFTDSSSK	IYFTDSSSK	2	IYFTDSSSK2	49878.6	61147.3	57277.1
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	IYGADDIELLPEAQNK	IYGADDIELLPEAQNK	2	IYGADDIELLPEAQNK2	41706.2	35759.5	47544.2
Q8K4K5	Q8K4K5	L2GL1_RAT	Llgl1	Lethal(2) giant larvae protein homolog 1	1	IYGAPGVEFTGLHR	IYGAPGVEFTGLHR	3	IYGAPGVEFTGLHR3			6354.63
Q5XI81	Q5XI81	FXR1_RAT	Fxr1	RNA-binding protein FXR1	1	IYGESAEAVK	IYGESAEAVK	2	IYGESAEAVK2	43031.7	39338.9	33656.3
Q5XI81	Q5XI81	FXR1_RAT	Fxr1	RNA-binding protein FXR1	1	IYGESAEAVKK	IYGESAEAVKK	2	IYGESAEAVKK2	5870.05	3717.74	3289.92
Q5XI81	Q5XI81	FXR1_RAT	Fxr1	RNA-binding protein FXR1	1	IYGESAEAVKK	IYGESAEAVKK	3	IYGESAEAVKK3	19025.8	19234.2	26449
A0A8J8YNR6	A0A8J8YNR6	A0A8J8YNR6_RAT	Fxr2	FMR1 autosomal homolog 2	1	IYGETPEACR	IYGETPEAC(UniMod:4)R	2	IYGETPEAC(UniMod:4)R2	11419.9	8419.32	17293.2
P62138	P62138;P63088;P62142	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	0	IYGFYDECK	IYGFYDEC(UniMod:4)K	2	IYGFYDEC(UniMod:4)K2	445302	421506	408676
P62138	P62138;P63088;P62142	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	0	IYGFYDECKR	IYGFYDEC(UniMod:4)KR	2	IYGFYDEC(UniMod:4)KR2	11019.5	5665.77	4155.25
P62138	P62138;P63088;P62142	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	0	IYGFYDECKR	IYGFYDEC(UniMod:4)KR	3	IYGFYDEC(UniMod:4)KR3	52949.3	57982.7	49343.8
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	IYGGILNLSEITNK	IYGGILNLSEITNK	2	IYGGILNLSEITNK2	56975.5	45463	54016.5
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	IYGGLTTK	IYGGLTTK	2	IYGGLTTK2	93587.4	102875	80557.2
Q5XHY5	Q5XHY5	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	1	IYGISFPDPK	IYGISFPDPK	2	IYGISFPDPK2	34617.6	22667.9	34109.5
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	IYGNRDTSSQLK	IYGNRDTSSQLK	2	IYGNRDTSSQLK2	2593.75		
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	IYGNRDTSSQLK	IYGNRDTSSQLK	3	IYGNRDTSSQLK3	304887	324592	540504
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	IYGNRDTSSQLKK	IYGNRDTSSQLKK	2	IYGNRDTSSQLKK2	1181.98	4263.08	5166.19
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	IYGNRDTSSQLKK	IYGNRDTSSQLKK	3	IYGNRDTSSQLKK3	153263	156626	280238
F7EUH5	F7EUH5	F7EUH5_RAT	Plxdc2	Plexin domain containing 2	1	IYGPADSASR	IYGPADSASR	2	IYGPADSASR2	1.53817e+06	1.48925e+06	1.53598e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	IYGTWEHNMINHLQVFSYFDTK	IYGTWEHNMINHLQVFSYFDTK	3	IYGTWEHNMINHLQVFSYFDTK3	4449.18	21259.6	11025.6
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	IYGTWEHNMINHLQVFSYFDTK	IYGTWEHNMINHLQVFSYFDTK	4	IYGTWEHNMINHLQVFSYFDTK4	41294	62678.3	38565.6
Q66H62	A0A8I6A0L1;Q66H62	CYLD_RAT	Cyld	Ubiquitin carboxyl-terminal hydrolase CYLD	0	IYGYVCATK	IYGYVC(UniMod:4)ATK	2	IYGYVC(UniMod:4)ATK2		4271.57	
D4A1B2	D4A1B2	D4A1B2_RAT	Arpin	Arpin	1	IYHDSALR	IYHDSALR	2	IYHDSALR2	32826.7	25005.6	32213.1
P16446	P16446	PIPNA_RAT	Pitpna	Phosphatidylinositol transfer protein alpha isoform	1	IYHLQSK	IYHLQSK	2	IYHLQSK2	15036.8	13872.9	14361.6
D3Z8W5	D3Z8W5	D3Z8W5_RAT	Ube2l3	Ube2l3 protein	1	IYHPNIDEK	IYHPNIDEK	2	IYHPNIDEK2	24827.4	22510.1	6691.1
P62839	D3ZDK2;P62839;P61078	UB2D2_RAT	Ube2d2	Ubiquitin-conjugating enzyme E2 D2	0	IYHPNINSNGSICLDILR	IYHPNINSNGSIC(UniMod:4)LDILR	3	IYHPNINSNGSIC(UniMod:4)LDILR3	8382.59	4829.32	1235.73
Q9EQX9	A0A8I6A248;Q9EQX9	UBE2N_RAT	Ube2n	Ubiquitin-conjugating enzyme E2 N	0	IYHPNVDK	IYHPNVDK	2	IYHPNVDK2	16679.2	11636.3	16175
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	IYHQLKK	IYHQLKK	2	IYHQLKK2			3408.23
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	IYHSHVDAPK	IYHSHVDAPK	2	IYHSHVDAPK2	157878		205419
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	IYHSHVDAPK	IYHSHVDAPK	3	IYHSHVDAPK3	184646		148226
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	IYIDDSNK	IYIDDSNK	2	IYIDDSNK2	35489.8	43849.5	36102.7
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	IYIDDSNKK	IYIDDSNKK	2	IYIDDSNKK2	32853.9	55685.6	42516.5
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	IYIDSNNNPER	IYIDSNNNPER	2	IYIDSNNNPER2	772868	920956	993712
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	IYIDSNNNPER	IYIDSNNNPER	3	IYIDSNNNPER3	18613.2	17068.9	22673
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	IYIGDDNPLTLTVK	IYIGDDNPLTLTVK	2	IYIGDDNPLTLTVK2	389024	367096	346933
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	IYIGDDNPLTLTVK	IYIGDDNPLTLTVK	3	IYIGDDNPLTLTVK3	10901	11071.6	9574.08
A0A0G2JWA3	A0A0G2JWA3	A0A0G2JWA3_RAT	Xpo7	Exportin 7	1	IYIGDQVQK	IYIGDQVQK	2	IYIGDQVQK2	20486.6		23133.9
Q9EQV9	Q9EQV9	CBPB2_RAT	Cpb2	Carboxypeptidase B2	1	IYIGSSYEK	IYIGSSYEK	2	IYIGSSYEK2	66117	61947.1	59260
A0A8I6GH80	A0A8I6GH80	A0A8I6GH80_RAT	Vps4b	vesicle-fusing ATPase	1	IYIPLPEAHAR	IYIPLPEAHAR	3	IYIPLPEAHAR3	36391.9	33474.3	37901.2
Q793F9	Q793F9	VPS4A_RAT	Vps4a	Vacuolar protein sorting-associated protein 4A	1	IYIPLPEEAAR	IYIPLPEEAAR	2	IYIPLPEEAAR2	31174.9	16249.8	24079.9
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	IYISLLK	IYISLLK	2	IYISLLK2	67834.4	60931.8	64921.7
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	IYITDGHMQLTVLTDR	IYITDGHMQLTVLTDR	3	IYITDGHMQLTVLTDR3	33381.6	14321.3	12532
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	IYITGSTFR	IYITGSTFR	2	IYITGSTFR2	3.54875e+06	3.44526e+06	2.89147e+06
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	IYITGSTFRSVQAK	IYITGSTFRSVQAK	3	IYITGSTFRSVQAK3	17998.8	24696.1	13700.2
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	IYITGSTFRSVQAKK	IYITGSTFRSVQAKK	3	IYITGSTFRSVQAKK3	9360.59	12615.1	5996.65
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	IYITGSTFRSVQAKK	IYITGSTFRSVQAKK	4	IYITGSTFRSVQAKK4	13796.7	19149.1	16486.9
Q6AYK6	Q6AYK6	CYBP_RAT	Cacybp	Calcyclin-binding protein	1	IYITLTGVHQVPAENVQVHFTER	IYITLTGVHQVPAENVQVHFTER	3	IYITLTGVHQVPAENVQVHFTER3	2328.47	3898.16	7709.85
Q6AYK6	Q6AYK6	CYBP_RAT	Cacybp	Calcyclin-binding protein	1	IYITLTGVHQVPAENVQVHFTER	IYITLTGVHQVPAENVQVHFTER	4	IYITLTGVHQVPAENVQVHFTER4	22597.4	22655.7	24700.2
P50398	P50398	GDIA_RAT	Gdi1	Rab GDP dissociation inhibitor alpha	1	IYKVPSTETEALASNLMGMFEK	IYKVPSTETEALASNLMGMFEK	3	IYKVPSTETEALASNLMGMFEK3	3968.97	4955.53	
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	IYLDEKR	IYLDEKR	2	IYLDEKR2	37185.6	51462.1	44566.9
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	IYLDGAPNK	IYLDGAPNK	2	IYLDGAPNK2	59834.3	66686.3	82933.4
Q3ZAU6	Q3ZAU6	Q3ZAU6_RAT	Rnf14	RBR-type E3 ubiquitin transferase	1	IYLDLPQNFK	IYLDLPQNFK	2	IYLDLPQNFK2	57984.8	44733.4	45117.9
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	IYLDMLNVYK	IYLDMLNVYK	2	IYLDMLNVYK2	26928.7	15919.4	27929.7
Q5PQL7	Q5PQL7	ITM2C_RAT	Itm2c	Integral membrane protein 2C	1	IYLEENYER	IYLEENYER	2	IYLEENYER2	13792.4	18808.3	17674
Q3MHS7	Q3MHS7	Q3MHS7_RAT	Gmds	GDP-mannose 4,6-dehydratase	1	IYLGQLECFSLGNLDAK	IYLGQLEC(UniMod:4)FSLGNLDAK	2	IYLGQLEC(UniMod:4)FSLGNLDAK2	8925.33	5836.42	7969.44
Q3MHS7	Q3MHS7	Q3MHS7_RAT	Gmds	GDP-mannose 4,6-dehydratase	1	IYLGQLECFSLGNLDAK	IYLGQLEC(UniMod:4)FSLGNLDAK	3	IYLGQLEC(UniMod:4)FSLGNLDAK3	7065.57	1940.3	
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	IYLKDPITAK	IYLKDPITAK	3	IYLKDPITAK3	11401.1	20785	16267.2
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	IYLLPDPQK	IYLLPDPQK	2	IYLLPDPQK2	9006.76	18193.8	16729.1
Q6IRE4	Q6IRE4	TS101_RAT	Tsg101	Tumor susceptibility gene 101 protein	1	IYLPYLHDWK	IYLPYLHDWK	3	IYLPYLHDWK3	91569.9	80754.9	92222.5
A0A8I6AGS4	A0A8I6AGS4	A0A8I6AGS4_RAT	Abi3bp	ABI family member 3 binding protein	1	IYLSDSLTGK	IYLSDSLTGK	2	IYLSDSLTGK2	34920.5	44153.7	38723.5
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	IYLSYYR	IYLSYYR	2	IYLSYYR2	36865.8	46311.1	46784.2
Q5XIH7	Q5XIH7	PHB2_RAT	Phb2	Prohibitin-2	1	IYLTADNLVLNLQDESFTR	IYLTADNLVLNLQDESFTR	3	IYLTADNLVLNLQDESFTR3	9780.24	11061.6	18761.3
F1LZ05	F1LZ05	F1LZ05_RAT	Parp14	Poly [ADP-ribose] polymerase	1	IYLVDVSAK	IYLVDVSAK	2	IYLVDVSAK2		4212.71	4622.22
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	IYLYLTK	IYLYLTK	2	IYLYLTK2	31034.3	28831.8	41975.9
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	IYMADLESALHYILR	IYMADLESALHYILR	3	IYMADLESALHYILR3	11284.5	11542.9	10398.7
Q5XID7	Q5XID7	ARMX3_RAT	Armcx3	Armadillo repeat-containing X-linked protein 3	1	IYMNQVCDDTVTSR	IYMNQVC(UniMod:4)DDTVTSR	2	IYMNQVC(UniMod:4)DDTVTSR2	1198.06	926.05	5852.76
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	IYMQMLLCPDPAVSFSCK	IYMQMLLC(UniMod:4)PDPAVSFSC(UniMod:4)K	3	IYMQMLLC(UniMod:4)PDPAVSFSC(UniMod:4)K3	48089.8	65195.9	50110.9
P49806	P49806	RGS10_RAT	Rgs10	Regulator of G-protein signaling 10	1	IYMTFLSNK	IYMTFLSNK	2	IYMTFLSNK2	74527	56514.1	58627.7
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	IYMYGGK	IYMYGGK	2	IYMYGGK2	80148.3	88710.7	78920.5
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	IYNCTWPNPAQK	IYNC(UniMod:4)TWPNPAQK	2	IYNC(UniMod:4)TWPNPAQK2	8029.65		4627
Q9JID1	Q9JID1	PDCD4_RAT	Pdcd4	Programmed cell death protein 4	1	IYNEIPDINLDVPHSYSVLER	IYNEIPDINLDVPHSYSVLER	3	IYNEIPDINLDVPHSYSVLER3	9656.84	17520.6	11669.3
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	IYNHPPHPTMSVDEVLEMLQR	IYNHPPHPTMSVDEVLEMLQR	3	IYNHPPHPTMSVDEVLEMLQR3	5771.45	7982.03	10589.7
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	IYNHPPHPTMSVDEVLEMLQR	IYNHPPHPTMSVDEVLEMLQR	4	IYNHPPHPTMSVDEVLEMLQR4		3704.14	6150.18
O54857	O54857	PTEN_RAT	Pten	Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN	1	IYNLCAER	IYNLC(UniMod:4)AER	2	IYNLC(UniMod:4)AER2	44010.8	47886.8	55207.7
B2RYT0	B2RYT0	B2RYT0_RAT	Mrps21	Mitochondrial ribosomal protein S21	1	IYNMEMAR	IYNMEMAR	2	IYNMEMAR2	5904.92	2722.17	
A0A8I5XWV4	A0A8I5XWV4	A0A8I5XWV4_RAT	Tm6sf1	Transmembrane 6 superfamily member 1	1	IYNQPSENYNYPSK	IYNQPSENYNYPSK	2	IYNQPSENYNYPSK2	20103.3	18490.3	12730.9
Q68EJ0	Q68EJ0	NB5R4_RAT	Cyb5r4	Cytochrome b5 reductase 4	1	IYPAGLFTPELDR	IYPAGLFTPELDR	2	IYPAGLFTPELDR2	2990.15		3703.09
P62815	P62815	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	1	IYPEEMIQTGISAIDGMNSIAR	IYPEEMIQTGISAIDGMNSIAR	3	IYPEEMIQTGISAIDGMNSIAR3	18779.4	16336	27183.7
P21913	P21913	SDHB_RAT	Sdhb	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial	1	IYPLPHMYVIK	IYPLPHMYVIK	2	IYPLPHMYVIK2	12993.2	9500.21	12951.3
P21913	P21913	SDHB_RAT	Sdhb	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial	1	IYPLPHMYVIK	IYPLPHMYVIK	3	IYPLPHMYVIK3	84419	94543.4	128610
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	IYPTATGEK	IYPTATGEK	2	IYPTATGEK2	122570	120613	145138
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	IYPTATGEKEENVK	IYPTATGEKEENVK	2	IYPTATGEKEENVK2	14905.8	13114.1	6951.1
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	IYPTATGEKEENVK	IYPTATGEKEENVK	3	IYPTATGEKEENVK3	170842	163879	137362
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	IYPTATGEKEENVKK	IYPTATGEKEENVKK	2	IYPTATGEKEENVKK2	6132.83	9059.38	7454.36
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	IYPTATGEKEENVKK	IYPTATGEKEENVKK	3	IYPTATGEKEENVKK3	134842	132808	144954
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	IYPTATGEKEENVKK	IYPTATGEKEENVKK	4	IYPTATGEKEENVKK4	106137	86450.7	105619
Q04931	Q04931	SSRP1_RAT	Ssrp1	FACT complex subunit SSRP1	1	IYPTFLHLHGK	IYPTFLHLHGK	3	IYPTFLHLHGK3	47913.1	10213.6	
Q66HF6	Q66HF6	Q66HF6_RAT	Tinag	Tubulointerstitial nephritis antigen	1	IYQCSPPYR	IYQC(UniMod:4)SPPYR	2	IYQC(UniMod:4)SPPYR2	1369.73	5593.9	8450.83
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	IYQFTAASPK	IYQFTAASPK	2	IYQFTAASPK2	1.71576e+06	1.99065e+06	2.26265e+06
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	IYQGEDLPHPK	IYQGEDLPHPK	2	IYQGEDLPHPK2	30295.8	26916.8	18580.4
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	IYQGEDLPHPK	IYQGEDLPHPK	3	IYQGEDLPHPK3	168971	224854	211660
F1LQ09	F1LQ09;Q6PST4	F1LQ09_RAT	Atl2	Atlastin GTPase 2	0	IYQGEELPHPK	IYQGEELPHPK	2	IYQGEELPHPK2	4639.62	1638.22	7662.03
F1LQ09	F1LQ09;Q6PST4	F1LQ09_RAT	Atl2	Atlastin GTPase 2	0	IYQGEELPHPK	IYQGEELPHPK	3	IYQGEELPHPK3	27341.9	41279.4	36157.9
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	IYQIYEGTAQIQR	IYQIYEGTAQIQR	2	IYQIYEGTAQIQR2	45126.8	44972	49508.5
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	IYQIYEGTAQIQR	IYQIYEGTAQIQR	3	IYQIYEGTAQIQR3	7584.05	4885.44	
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	IYQMDIQGELER	IYQMDIQGELER	2	IYQMDIQGELER2	33367.4	23267.8	37341.9
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	IYQNGESFQPNCK	IYQNGESFQPNC(UniMod:4)K	2	IYQNGESFQPNC(UniMod:4)K2	8225.97	8161.89	10426.6
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	IYQNIQDGSLDLNAAESGVQHK	IYQNIQDGSLDLNAAESGVQHK	3	IYQNIQDGSLDLNAAESGVQHK3	4980.74		5542.69
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	IYQNIQDGSLDLNAAESGVQHKPSAPQGGR	IYQNIQDGSLDLNAAESGVQHKPSAPQGGR	4	IYQNIQDGSLDLNAAESGVQHKPSAPQGGR4	212396	214674	249113
A0A0G2K189	A0A0G2K189	A0A0G2K189_RAT	Scrn3	Secernin 3	1	IYQPNISS	IYQPNISS	1	IYQPNISS1		1030.91	990.647
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	IYQPSYLSINNEVEEK	IYQPSYLSINNEVEEK	2	IYQPSYLSINNEVEEK2	11777.7	11108.1	14837.8
Q3MQ06	Q3MQ06	ATG5_RAT	Atg5	Autophagy protein 5	1	IYQTTTERPFIQK	IYQTTTERPFIQK	3	IYQTTTERPFIQK3	36031.1	22009.7	34936.5
Q5PQL2	Q5PQL2	CNOT9_RAT	Cnot9	CCR4-NOT transcription complex subunit 9	1	IYQWINELSSPETR	IYQWINELSSPETR	2	IYQWINELSSPETR2	5816.41		2708.1
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	IYQYVINK	IYQYVINK	2	IYQYVINK2	535481	625201	556573
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	IYREIDVDR	IYREIDVDR	3	IYREIDVDR3	59188.2	78853.1	82616.1
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	IYSDVTCFLEHVTHK	IYSDVTC(UniMod:4)FLEHVTHK	3	IYSDVTC(UniMod:4)FLEHVTHK3	22431.5	19188.2	43541.9
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	IYSDVTCFLEHVTHK	IYSDVTC(UniMod:4)FLEHVTHK	4	IYSDVTC(UniMod:4)FLEHVTHK4	23276.3	25886.3	30184.5
Q6P7B4	Q6P7B4	GAK1B_RAT	Gask1b	Golgi-associated kinase 1B	1	IYSESAPSWLSK	IYSESAPSWLSK	2	IYSESAPSWLSK2	14130.8	10550.3	7382.23
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	IYSFGLGGR	IYSFGLGGR	2	IYSFGLGGR2	302028	302967	304545
P50298	P50298;G3V9I5;P50297	ARY2_RAT	Nat2	Arylamine N-acetyltransferase 2	0	IYSFTLEPR	IYSFTLEPR	2	IYSFTLEPR2	8238.12		7118.91
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	IYSHDGTDSPPDANDVVVILNNFK	IYSHDGTDSPPDANDVVVILNNFK	3	IYSHDGTDSPPDANDVVVILNNFK3	105757	119624	107727
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	IYSHSLLPIIR	IYSHSLLPIIR	3	IYSHSLLPIIR3	15659.7	11755.3	22048.2
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	IYSLFNLYMGK	IYSLFNLYMGK	2	IYSLFNLYMGK2	191583	162609	137669
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	IYSLSSQPIDHEGIK	IYSLSSQPIDHEGIK	2	IYSLSSQPIDHEGIK2	6987.62	12333.3	6594.45
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	IYSLSSQPIDHEGIK	IYSLSSQPIDHEGIK	3	IYSLSSQPIDHEGIK3	37839.9	34084.1	32122.6
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	IYSNNQYAR	IYSNNQYAR	2	IYSNNQYAR2	25670.7	34615.5	24650.3
G3V9R2	F7ESI5;G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	0	IYSQSGENIEFMCK	IYSQSGENIEFMC(UniMod:4)K	2	IYSQSGENIEFMC(UniMod:4)K2	83494.2	82720.2	65987.3
G3V9R2	F7ESI5;G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	0	IYSQSGENIEFMCK	IYSQSGENIEFMC(UniMod:4)K	3	IYSQSGENIEFMC(UniMod:4)K3	10869.6	5874.28	8232.89
G3V9R2	F7ESI5;G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	0	IYSQSGENIEFMCKPGYR	IYSQSGENIEFMC(UniMod:4)KPGYR	3	IYSQSGENIEFMC(UniMod:4)KPGYR3	163706	168974	140431
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	IYSSDTIK	IYSSDTIK	2	IYSSDTIK2	90884.2	105217	89032.2
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	IYSTAFDYFSCPPK	IYSTAFDYFSC(UniMod:4)PPK	2	IYSTAFDYFSC(UniMod:4)PPK2	7642.95	8796.77	8004.32
P70619	P70619	GSHR_RAT	Gsr	Glutathione reductase (Fragment)	1	IYSTAFTPMYHAVTTR	IYSTAFTPMYHAVTTR	3	IYSTAFTPMYHAVTTR3	39094.7	46132.2	51008.1
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	IYSTLAGSR	IYSTLAGSR	2	IYSTLAGSR2	150088	136819	148851
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	IYSTLAGTR	IYSTLAGTR	2	IYSTLAGTR2	94766.3	76587.8	93819.2
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	IYSVGAEVTFSCEEGHQLVGVR	IYSVGAEVTFSC(UniMod:4)EEGHQLVGVR	3	IYSVGAEVTFSC(UniMod:4)EEGHQLVGVR3	57673.4	50869.5	61223.3
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	IYSVNAQWEHGDLR	IYSVNAQWEHGDLR	3	IYSVNAQWEHGDLR3		5087.46	5123.41
P08650	P08650	CO5_RAT	C5	Complement C5	1	IYTALAK	IYTALAK	1	IYTALAK1	11598.6	8329.15	8005.36
P08650	P08650	CO5_RAT	C5	Complement C5	1	IYTALAK	IYTALAK	2	IYTALAK2	1.04887e+06	894346	775942
A0A0G2K542	A0A0G2K542	A0A0G2K542_RAT	Ugp2	UTP--glucose-1-phosphate uridylyltransferase	1	IYTFNQSR	IYTFNQSR	2	IYTFNQSR2	57551.8	41573.2	48662.1
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	IYTLFLQR	IYTLFLQR	2	IYTLFLQR2	34182.4	29004.3	25929.8
A0A8I6A822	A0A8I6A822	A0A8I6A822_RAT	Tm9sf3	Transmembrane 9 superfamily member	1	IYTNVKID	IYTNVKID	2	IYTNVKID2			3147.95
Q68FX0	Q68FX0	IDH3B_RAT	Idh3B	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	IYTPMEYK	IYTPMEYK	2	IYTPMEYK2	113250	96169.7	100418
P67779	P67779;A0A8I5ZUY9	PHB1_RAT	Phb1	Prohibitin 1	0	IYTSIGEDYDER	IYTSIGEDYDER	2	IYTSIGEDYDER2	82225.8	85872.8	80960.6
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	IYTTALSDRDQAGSSTGYPASR	IYTTALSDRDQAGSSTGYPASR	3	IYTTALSDRDQAGSSTGYPASR3	19003.6	12002.5	27557.1
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	IYVAANSGAR	IYVAANSGAR	2	IYVAANSGAR2	20921.4	25477.5	24838.4
P11980	P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	1	IYVDDGLISLQVK	IYVDDGLISLQVK	2	IYVDDGLISLQVK2	115715	121310	108998
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	IYVEIER	IYVEIER	2	IYVEIER2	286070	327090	322926
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	IYVFQGEAAEIR	IYVFQGEAAEIR	2	IYVFQGEAAEIR2	23317.1	22487.6	18220.6
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	IYVFQGEAAEIRR	IYVFQGEAAEIRR	3	IYVFQGEAAEIRR3	34975.9	40698.3	39654.6
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	IYVISLAEPR	IYVISLAEPR	2	IYVISLAEPR2	101439	75542.7	93124
Q63468	Q63468	KPRA_RAT	Prpsap1	Phosphoribosyl pyrophosphate synthase-associated protein 1	1	IYVMATHGILSAEAPR	IYVMATHGILSAEAPR	3	IYVMATHGILSAEAPR3	8807.88	15046.4	12145.2
O88917	O88917	AGRL1_RAT	Adgrl1	Adhesion G protein-coupled receptor L1	1	IYVMPWIPYR	IYVMPWIPYR	2	IYVMPWIPYR2	12931.5	8308.47	7053.18
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	IYVPLKDCPQDFMTRPK	IYVPLKDC(UniMod:4)PQDFMTRPK	4	IYVPLKDC(UniMod:4)PQDFMTRPK4	11170.6	18738.5	18789.8
Q9WVH8	Q9WVH8	FBLN5_RAT	Fbln5	Fibulin-5	1	IYVSQYPF	IYVSQYPF	2	IYVSQYPF2	18095.5	27663.8	33732.1
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	IYVVQPK	IYVVQPK	2	IYVVQPK2	87326.2	94959.7	105587
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	IYWADAR	IYWADAR	2	IYWADAR2	81509.4	122796	115466
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	IYWADAREDYIEFASLDGSNR	IYWADAREDYIEFASLDGSNR	3	IYWADAREDYIEFASLDGSNR3	31404.9	39181.2	40463.8
Q05695	Q05695	L1CAM_RAT	L1cam	Neural cell adhesion molecule L1	1	IYWMNSK	IYWMNSK	2	IYWMNSK2	39244.5	28374.3	30969.2
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	IYWSDLSQR	IYWSDLSQR	2	IYWSDLSQR2	99571.7	130392	108308
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	IYYTTERDEQGSK	IYYTTERDEQGSK	2	IYYTTERDEQGSK2	2356.72	571.243	2078.03
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	IYYTTERDEQGSK	IYYTTERDEQGSK	3	IYYTTERDEQGSK3	105499	92269.1	118478
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	IYYVDHFTR	IYYVDHFTR	2	IYYVDHFTR2	10177.1	9794.38	6593
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	IYYVDHFTR	IYYVDHFTR	3	IYYVDHFTR3	74911	95646.9	70449.7
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	KAAAPMETCK	KAAAPMETC(UniMod:4)K	2	KAAAPMETC(UniMod:4)K2			31035.3
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	KAADVHEVR	KAADVHEVR	2	KAADVHEVR2			9568.48
P54311	P54311	GBB1_RAT	Gnb1	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1	1	KACADATLSQITNNIDPVGR	KAC(UniMod:4)ADATLSQITNNIDPVGR	3	KAC(UniMod:4)ADATLSQITNNIDPVGR3	51741.7	57035.6	55731
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	KACEVALEEIK	KAC(UniMod:4)EVALEEIK	3	KAC(UniMod:4)EVALEEIK3	1058.36	2400.89	
P54313	P54313	GBB2_RAT	Gnb2	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2	1	KACGDSTLTQITAGLDPVGR	KAC(UniMod:4)GDSTLTQITAGLDPVGR	3	KAC(UniMod:4)GDSTLTQITAGLDPVGR3	190411	219227	228480
P51583	P51583;A0A0G2K5S4	PUR6_RAT	Paics	Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase	0	KACGNFGIPCELR	KAC(UniMod:4)GNFGIPC(UniMod:4)ELR	3	KAC(UniMod:4)GNFGIPC(UniMod:4)ELR3	3412.51		9171.33
O35353	O35353	GBB4_RAT	Gnb4	Guanine nucleotide-binding protein subunit beta-4	1	KACNDATLVQITSNMDSVGR	KAC(UniMod:4)NDATLVQITSNMDSVGR	3	KAC(UniMod:4)NDATLVQITSNMDSVGR3	86148	82495.8	91537.4
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	KACSAIHAVNLR	KAC(UniMod:4)SAIHAVNLR	3	KAC(UniMod:4)SAIHAVNLR3	3515.34	7522.67	5176.01
P11915	P11915	SCP2_RAT	Scp2	Sterol carrier protein 2	1	KADCTITMADSDLLALMTGK	KADC(UniMod:4)TITMADSDLLALMTGK	3	KADC(UniMod:4)TITMADSDLLALMTGK3	4726.83	5078.93	4810.3
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	KADELQK	KADELQK	2	KADELQK2			105172
D3ZSY8	D3ZSY8	D3ZSY8_RAT	Tbc1d10b	TBC1 domain family, member 10b	1	KADGPPAPQDGGDR	KADGPPAPQDGGDR	3	KADGPPAPQDGGDR3	3212.61		8777.13
P62271	D3ZM33;P62271;A0A0G2KA79;D3ZAU6	RS18_RAT	Rps18	Small ribosomal subunit protein uS13	0	KADIDLTK	KADIDLTK	2	KADIDLTK2	6346.2	5066.51	
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	KADIGVAMGIVGSDVSK	KADIGVAMGIVGSDVSK	3	KADIGVAMGIVGSDVSK3	21682.7	21731.8	23847.1
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	KADNPQCLLGDFVTEFLK	KADNPQC(UniMod:4)LLGDFVTEFLK	3	KADNPQC(UniMod:4)LLGDFVTEFLK3	4976.41	5955.17	
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	KADPQEAINCLMR	KADPQEAINC(UniMod:4)LMR	3	KADPQEAINC(UniMod:4)LMR3	102442	85624.5	74295.3
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	KADRDQYELLCPDNTR	KADRDQYELLC(UniMod:4)PDNTR	3	KADRDQYELLC(UniMod:4)PDNTR3	8263.23	5186.49	7050.66
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	KADRDQYELLCPDNTR	KADRDQYELLC(UniMod:4)PDNTR	4	KADRDQYELLC(UniMod:4)PDNTR4	17840.1	29880.4	16101.5
P11505	Q64542;Q64568;P11505;P11506	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	0	KADVGFAMGIAGTDVAK	KADVGFAMGIAGTDVAK	3	KADVGFAMGIAGTDVAK3	4793.02	5466.19	4669.85
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	KADVIPVHYYLIPPPTK	KADVIPVHYYLIPPPTK	4	KADVIPVHYYLIPPPTK4	4978.75	4196.74	8013.48
Q4V8B2	Q4V8B2	DCNL3_RAT	Dcun1d3	DCN1-like protein 3	1	KAEAATEACQLPTSSGDAGR	KAEAATEAC(UniMod:4)QLPTSSGDAGR	3	KAEAATEAC(UniMod:4)QLPTSSGDAGR3	1434.01		
P00507	P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	1	KAEAQIAGK	KAEAQIAGK	2	KAEAQIAGK2			2253.74
Q9JMB3	Q9JMB3	Q9JMB3_RAT	Epb41l3	Erythrocyte membrane protein band 4.1-like 3	1	KAEEATPVAALR	KAEEATPVAALR	3	KAEEATPVAALR3	7930.82	7030.72	9679.11
Q62921	Q62921	HOIL1_RAT	Rbck1	RanBP-type and C3HC4-type zinc finger-containing protein 1	1	KAEEMALSLAR	KAEEMALSLAR	3	KAEEMALSLAR3	4179.77	2774.66	2363.1
P52632	P52632	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	1	KAEHQVGEDGFLLK	KAEHQVGEDGFLLK	3	KAEHQVGEDGFLLK3		44977.4	60671.7
P18596	P18596;Q64578	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	0	KAEIGIAMGSGTAVAK	KAEIGIAMGSGTAVAK	2	KAEIGIAMGSGTAVAK2	5638.35	6349.07	6253.45
P18596	P18596;Q64578	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	0	KAEIGIAMGSGTAVAK	KAEIGIAMGSGTAVAK	3	KAEIGIAMGSGTAVAK3	112964	98747.3	117520
M0RA86	M0RA86	M0RA86_RAT	Ccdc9	Coiled-coil domain containing 9	1	KAELEGVAVTAPR	KAELEGVAVTAPR	3	KAELEGVAVTAPR3	6875.24	14659.5	12314.1
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	KAESSPNAEPSDEGNSR	KAESSPNAEPSDEGNSR	2	KAESSPNAEPSDEGNSR2			2325.62
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	KAESSPNAEPSDEGNSR	KAESSPNAEPSDEGNSR	3	KAESSPNAEPSDEGNSR3			30492.8
D3ZZ81	A0A8I6AK94;D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	0	KAETLPEVEAELAQR	KAETLPEVEAELAQR	3	KAETLPEVEAELAQR3	9674.87	4136.4	5375.69
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	KAEYPFSSEQK	KAEYPFSSEQK	2	KAEYPFSSEQK2	11294.7	9792.44	9160.96
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	KAEYPFSSEQK	KAEYPFSSEQK	3	KAEYPFSSEQK3	89214.2	105345	92192.6
A0A0G2K975	A0A0G2K975	A0A0G2K975_RAT	Cfhr4	Similar to complement factor H-related protein	1	KAEYSHGDVVEYDCKPR	KAEYSHGDVVEYDC(UniMod:4)KPR	4	KAEYSHGDVVEYDC(UniMod:4)KPR4	3252.07		860.088
A0A8I6A282	A0A8I6A282	A0A8I6A282_RAT	Antxr2	Anthrax toxin receptor	1	KAFDLYFVLDK	KAFDLYFVLDK	2	KAFDLYFVLDK2	6899.76	2271.24	32253.3
A0A8I6A282	A0A8I6A282	A0A8I6A282_RAT	Antxr2	Anthrax toxin receptor	1	KAFDLYFVLDK	KAFDLYFVLDK	3	KAFDLYFVLDK3	9436.71	15106.2	2750.07
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	KAFEEAEK	KAFEEAEK	2	KAFEEAEK2	21307		29338.4
Q5RJM1	Q5RJM1	PORED_RAT	Srd5a3	Polyprenol reductase	1	KAFLPFLF	KAFLPFLF	2	KAFLPFLF2		6894.85	
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	KAGNQTGLYVLR	KAGNQTGLYVLR	3	KAGNQTGLYVLR3		5060.43	5348.68
A0A8I6A3Z7	A0A8I6A3Z7	A0A8I6A3Z7_RAT	AC095947.1	Chaperonin 10	1	KAGQAFRK	KAGQAFRK	2	KAGQAFRK2		505253	
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	KAGTQIENIEEDFRDGLK	KAGTQIENIEEDFRDGLK	4	KAGTQIENIEEDFRDGLK4	8434.73	13502.4	9157.61
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	KAHEILPDLVCCSAK	KAHEILPDLVC(UniMod:4)C(UniMod:4)SAK	2	KAHEILPDLVC(UniMod:4)C(UniMod:4)SAK2	1387.34	3833.97	1112.43
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	KAHEILPDLVCCSAK	KAHEILPDLVC(UniMod:4)C(UniMod:4)SAK	3	KAHEILPDLVC(UniMod:4)C(UniMod:4)SAK3	36049	34570.1	32750.8
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	KAHEILPDLVCCSAK	KAHEILPDLVC(UniMod:4)C(UniMod:4)SAK	4	KAHEILPDLVC(UniMod:4)C(UniMod:4)SAK4	37067.4	46884.5	41737.1
A0A8I5ZKJ3	A0A8I5ZKJ3	A0A8I5ZKJ3_RAT	Ndufa2	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2	1	KAHPDLPILIR	KAHPDLPILIR	3	KAHPDLPILIR3	9097.47	8998.12	9141.44
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	KAIIGLYNYAHEMTHGASDR	KAIIGLYNYAHEMTHGASDR	4	KAIIGLYNYAHEMTHGASDR4	1942.39	4211.15	
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	KAIVDCIISIVEENPESK	KAIVDC(UniMod:4)IISIVEENPESK	3	KAIVDC(UniMod:4)IISIVEENPESK3	9202.73	6086.82	
F1LRI5	F1LRI5	F1LRI5_RAT	Gcn1	GCN1 activator of EIF2AK4	1	KALCDPLEEVR	KALC(UniMod:4)DPLEEVR	3	KALC(UniMod:4)DPLEEVR3		5595.69	1083.77
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	KALDETLENQKPTLHK	KALDETLENQKPTLHK	4	KALDETLENQKPTLHK4	110055	101900	89329.3
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	KALDKYK	KALDKYK	2	KALDKYK2			10495.1
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	KALEEAGFK	KALEEAGFK	2	KALEEAGFK2	94176.9	76749.1	84417.8
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	KALEEAGFKLPCQLHQVIVAR	KALEEAGFKLPC(UniMod:4)QLHQVIVAR	4	KALEEAGFKLPC(UniMod:4)QLHQVIVAR4	11402.2	12341.8	20889.8
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	KALEGIISNFGQTPCQLLK	KALEGIISNFGQTPC(UniMod:4)QLLK	3	KALEGIISNFGQTPC(UniMod:4)QLLK3	11985.3	13960.6	23258.7
B5DEH2	B5DEH2	ERLN2_RAT	Erlin2	Erlin-2	1	KALIEAEK	KALIEAEK	2	KALIEAEK2	6497.07	10321.2	4579.07
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	KALTSFER	KALTSFER	2	KALTSFER2	19683.4	14952.5	6685.65
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	KALYSEYTDGTFTK	KALYSEYTDGTFTK	2	KALYSEYTDGTFTK2	6829.59		2348.41
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	KALYSEYTDGTFTK	KALYSEYTDGTFTK	3	KALYSEYTDGTFTK3	83796.3	75953.2	89058
Q66HF9	Q4V7E8;Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	0	KAMVSNAQLDNEK	KAMVSNAQLDNEK	3	KAMVSNAQLDNEK3	14218.2	10978.9	15712.1
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	KANEEELK	KANEEELK	2	KANEEELK2			13614.1
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	KANIPIMDTGENPEVPFPR	KANIPIMDTGENPEVPFPR	3	KANIPIMDTGENPEVPFPR3	46226.8	50966	46046.4
Q6P9U8	Q6P9U8	EIF3H_RAT	Eif3h	Eukaryotic translation initiation factor 3 subunit H	1	KANITFEHMFEEVPIVIK	KANITFEHMFEEVPIVIK	3	KANITFEHMFEEVPIVIK3	12930.6	2804.71	11149.4
Q6P9U8	Q6P9U8	EIF3H_RAT	Eif3h	Eukaryotic translation initiation factor 3 subunit H	1	KANITFEHMFEEVPIVIK	KANITFEHMFEEVPIVIK	4	KANITFEHMFEEVPIVIK4	17306.7	17423.3	13639.3
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KANLQIDQINTDLNLER	KANLQIDQINTDLNLER	3	KANLQIDQINTDLNLER3	29316.2	32034.8	32904
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	KANLQYYA	KANLQYYA	2	KANLQYYA2	23304.6	28438.2	24221.2
P36953	P36953	AFAM_RAT	Afm	Afamin	1	KANVGFLPPFPTLDPEEK	KANVGFLPPFPTLDPEEK	3	KANVGFLPPFPTLDPEEK3	166176	144815	130619
Q9ET64	Q9ET64	NSMA_RAT	Smpd2	Sphingomyelin phosphodiesterase 2	1	KANVVLLCGDLNMHPK	KANVVLLC(UniMod:4)GDLNMHPK	3	KANVVLLC(UniMod:4)GDLNMHPK3	1543.92	10110.5	5493.88
Q9ET64	Q9ET64	NSMA_RAT	Smpd2	Sphingomyelin phosphodiesterase 2	1	KANVVLLCGDLNMHPK	KANVVLLC(UniMod:4)GDLNMHPK	4	KANVVLLC(UniMod:4)GDLNMHPK4	3431.36	2413.4	3014.83
O35763	O35763;P31977;Q5PQK5	MOES_RAT	Msn	Moesin	0	KAPDFVFYAPR	KAPDFVFYAPR	3	KAPDFVFYAPR3	186671	192970	193202
D4A0G0	D4A0G0	D4A0G0_RAT	Osbpl7	Oxysterol-binding protein	1	KAPGTQTLTAGSASALPGVGPR	KAPGTQTLTAGSASALPGVGPR	3	KAPGTQTLTAGSASALPGVGPR3	3533.39	7357	8000.62
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	KAPIFTSEHGEK	KAPIFTSEHGEK	2	KAPIFTSEHGEK2	11104.7	6044.75	4562
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	KAPIFTSEHGEK	KAPIFTSEHGEK	3	KAPIFTSEHGEK3	86866.3	72051.3	73481.1
B2RZ33	B2RZ33	B2RZ33_RAT	Nck1	Cytoplasmic protein	1	KAPIFTSEQGEK	KAPIFTSEQGEK	2	KAPIFTSEQGEK2	7213.59	6780.33	
B2RZ33	B2RZ33	B2RZ33_RAT	Nck1	Cytoplasmic protein	1	KAPIFTSEQGEK	KAPIFTSEQGEK	3	KAPIFTSEQGEK3		13507.7	18641.3
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	KAPLVASDSSSSGGSDSEDDEK	KAPLVASDSSSSGGSDSEDDEK	3	KAPLVASDSSSSGGSDSEDDEK3	2842.09	1627.43	
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	KAPPALIDECIEK	KAPPALIDEC(UniMod:4)IEK	3	KAPPALIDEC(UniMod:4)IEK3	18881.4	18783.2	8542.52
Q9Z254	Q9Z254	GIPC1_RAT	Gipc1	PDZ domain-containing protein GIPC1	1	KAPPLVENEEAEPSR	KAPPLVENEEAEPSR	2	KAPPLVENEEAEPSR2	14226.1	6690.37	
Q9Z254	Q9Z254	GIPC1_RAT	Gipc1	PDZ domain-containing protein GIPC1	1	KAPPLVENEEAEPSR	KAPPLVENEEAEPSR	3	KAPPLVENEEAEPSR3	38037.5	41629.3	28040.5
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	KAPPPPPTSFPR	KAPPPPPTSFPR	3	KAPPPPPTSFPR3	10244.9	6701.53	
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	KAPQHTAVGFK	KAPQHTAVGFK	3	KAPQHTAVGFK3		52324.1	47053.3
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	KAPVLFSK	KAPVLFSK	2	KAPVLFSK2	106605	92951.3	106673
Q561Q9	Q561Q9	Q561Q9_RAT	Ctsw	Cathepsin W	1	KAPVSCPP	KAPVSC(UniMod:4)PP	2	KAPVSC(UniMod:4)PP2	26393.1	30288.3	31987.8
P20611	P20611	PPAL_RAT	Acp2	Lysosomal acid phosphatase	1	KAPWPLTLPGCPHR	KAPWPLTLPGC(UniMod:4)PHR	3	KAPWPLTLPGC(UniMod:4)PHR3	17106.1	23008.8	16134.4
P20611	P20611	PPAL_RAT	Acp2	Lysosomal acid phosphatase	1	KAPWPLTLPGCPHR	KAPWPLTLPGC(UniMod:4)PHR	4	KAPWPLTLPGC(UniMod:4)PHR4	21355.1	21294.2	29035.2
P19511	P19511	AT5F1_RAT	Atp5pb	ATP synthase F(0) complex subunit B1, mitochondrial	1	KAQAQPIM	KAQAQPIM	2	KAQAQPIM2	71888.6	96049	89406
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	KAQDALPFFMMHLGYEK	KAQDALPFFMMHLGYEK	3	KAQDALPFFMMHLGYEK3	15033.8	16419.1	20718.2
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	KAQDALPFFMMHLGYEK	KAQDALPFFMMHLGYEK	4	KAQDALPFFMMHLGYEK4	20466	27422	17351.8
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	KAQDEGHLSDIVPFK	KAQDEGHLSDIVPFK	3	KAQDEGHLSDIVPFK3	31714.7	20830	30301.2
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	KAQDEGHLSDIVPFK	KAQDEGHLSDIVPFK	4	KAQDEGHLSDIVPFK4	60679.4	62433.9	60530.7
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	KAQDEGHLSDIVPFKVPGK	KAQDEGHLSDIVPFKVPGK	3	KAQDEGHLSDIVPFKVPGK3	22072.8	16019.2	24186
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	KAQDEGHLSDIVPFKVPGK	KAQDEGHLSDIVPFKVPGK	4	KAQDEGHLSDIVPFKVPGK4	24318.1	39695.1	21848.1
Q8CHM7	Q8CHM7	HACL1_RAT	Hacl1	2-hydroxyacyl-CoA lyase 1	1	KAQDFHWLTR	KAQDFHWLTR	3	KAQDFHWLTR3	7480.1	3900.46	9209.11
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	KAQLQDAGVYECESK	KAQLQDAGVYEC(UniMod:4)ESK	3	KAQLQDAGVYEC(UniMod:4)ESK3	2734.72	3782.79	1916.48
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	KAQNAADSYSWIPER	KAQNAADSYSWIPER	3	KAQNAADSYSWIPER3	37266.4	64896.4	53582.1
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	KAQPSQAADEPAEK	KAQPSQAADEPAEK	2	KAQPSQAADEPAEK2			7918.38
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	KAQPSQAADEPAEK	KAQPSQAADEPAEK	3	KAQPSQAADEPAEK3			10497.1
O35763	O35763	MOES_RAT	Msn	Moesin	1	KAQQELEEQTR	KAQQELEEQTR	2	KAQQELEEQTR2	3695.95	2989.95	
O35763	O35763	MOES_RAT	Msn	Moesin	1	KAQQELEEQTR	KAQQELEEQTR	3	KAQQELEEQTR3	37229.1	36927.6	40559
O35763	O35763	MOES_RAT	Msn	Moesin	1	KAQQELEEQTRR	KAQQELEEQTRR	3	KAQQELEEQTRR3	9681.63		
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	KAQQYLDMCWK	KAQQYLDMC(UniMod:4)WK	2	KAQQYLDMC(UniMod:4)WK2	4891	2635.19	3552.41
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	KAQQYLDMCWK	KAQQYLDMC(UniMod:4)WK	3	KAQQYLDMC(UniMod:4)WK3	37647.1	41871.9	39451
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	KAQYMCK	KAQYMC(UniMod:4)K	2	KAQYMC(UniMod:4)K2			5538.91
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	KASDAEIMSSQSALALDER	KASDAEIMSSQSALALDER	3	KASDAEIMSSQSALALDER3		1167.29	1651.36
F7F288	F7F288	F7F288_RAT	Bcap29	B-cell receptor-associated protein	1	KASDALFK	KASDALFK	2	KASDALFK2	11612.6	17644.7	17233.1
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	KASESSALTPPTPR	KASESSALTPPTPR	3	KASESSALTPPTPR3	5214.22	7078.71	10208.6
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	KASGHPGDPESQQR	KASGHPGDPESQQR	2	KASGHPGDPESQQR2			25082.2
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	KASPGTQDLPGIQTGMMAPENK	KASPGTQDLPGIQTGMMAPENK	3	KASPGTQDLPGIQTGMMAPENK3	2979.29	5488.69	5191.51
Q0H8B9	Q0H8B9	CL2DB_RAT	Clec2d11	C-type lectin domain family 2 member D11	1	KASQPMLNTTGSLQEGEMGK	KASQPMLNTTGSLQEGEMGK	3	KASQPMLNTTGSLQEGEMGK3	2821.67	2321.52	
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	KASSEGGAATGAGLDSLHK	KASSEGGAATGAGLDSLHK	2	KASSEGGAATGAGLDSLHK2	1099.61		
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	KASSEGGAATGAGLDSLHK	KASSEGGAATGAGLDSLHK	3	KASSEGGAATGAGLDSLHK3	19363.3	22249.9	21011.1
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	KASSEGGAATGAGLDSLHK	KASSEGGAATGAGLDSLHK	4	KASSEGGAATGAGLDSLHK4	20773.5	25556.1	30708.7
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	KASVPMATPGAWK	KASVPMATPGAWK	3	KASVPMATPGAWK3	3755.42	5971.11	5439.45
P23965	P23965	ECI1_RAT	Eci1	Enoyl-CoA delta isomerase 1, mitochondrial	1	KATADNLIK	KATADNLIK	2	KATADNLIK2	19983.2	16201.9	12957.5
P04692	P58775;P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	0	KATDAEADVASLNR	KATDAEADVASLNR	2	KATDAEADVASLNR2	40567.9	39547.6	45549.5
P04692	P58775;P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	0	KATDAEADVASLNR	KATDAEADVASLNR	3	KATDAEADVASLNR3	986426	1.02961e+06	949396
P04692	P58775;P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	0	KATDAEADVASLNRR	KATDAEADVASLNRR	2	KATDAEADVASLNRR2	657.667	3718.1	870.541
P04692	P58775;P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	0	KATDAEADVASLNRR	KATDAEADVASLNRR	3	KATDAEADVASLNRR3	203629	255089	324179
P04692	P58775;P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	0	KATDAEADVASLNRR	KATDAEADVASLNRR	4	KATDAEADVASLNRR4	35056.2	35389.5	50663.1
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	KATDFEHR	KATDFEHR	2	KATDFEHR2			9835.16
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	KATEEDVLEQK	KATEEDVLEQK	2	KATEEDVLEQK2	26627	16026.1	8866.72
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	KATEEDVLEQK	KATEEDVLEQK	3	KATEEDVLEQK3	167989	164291	185184
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	KATEEDVLEQKVPEATNR	KATEEDVLEQKVPEATNR	3	KATEEDVLEQKVPEATNR3	28035.4	30430.2	21344.9
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	KATEEDVLEQKVPEATNR	KATEEDVLEQKVPEATNR	4	KATEEDVLEQKVPEATNR4	118320	154807	147316
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	KATGDWFYDQK	KATGDWFYDQK	2	KATGDWFYDQK2	23483.4	17284.7	22185.1
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	KATGDWFYDQK	KATGDWFYDQK	3	KATGDWFYDQK3	66657.2	75860	113920
P08934	P08932;A0A0G2KA54;P08934	KNG1_RAT	Kng1	Kininogen-1	0	KATSQVVAGTK	KATSQVVAGTK	2	KATSQVVAGTK2			84140.9
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	KATVDMLQAEGGR	KATVDMLQAEGGR	3	KATVDMLQAEGGR3		13885.6	
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	KATVLYQGQR	KATVLYQGQR	2	KATVLYQGQR2	67630.9	63482.1	63037.4
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	KATVLYQGQR	KATVLYQGQR	3	KATVLYQGQR3	659283	743852	779124
B2RZ37	B2RZ37	REEP5_RAT	Reep5	Receptor expression-enhancing protein 5	1	KATVNLLGDEK	KATVNLLGDEK	2	KATVNLLGDEK2	7641.17	9019.01	10384
B2RZ37	B2RZ37	REEP5_RAT	Reep5	Receptor expression-enhancing protein 5	1	KATVNLLGDEK	KATVNLLGDEK	3	KATVNLLGDEK3	108477	131017	121407
B2RZ37	B2RZ37	REEP5_RAT	Reep5	Receptor expression-enhancing protein 5	1	KATVNLLGDEKK	KATVNLLGDEKK	3	KATVNLLGDEKK3	32629.1	39172.9	27421.2
Q05028	Q05028	PDGFB_RAT	Pdgfb	Platelet-derived growth factor subunit B (Fragment)	1	KATVTLEDHLACK	KATVTLEDHLAC(UniMod:4)K	3	KATVTLEDHLAC(UniMod:4)K3			4807.62
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	KATYDIEVNTR	KATYDIEVNTR	3	KATYDIEVNTR3	14591.8	7625.97	4211.12
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	KAVAEVEEMCNILSMEGVTVK	KAVAEVEEMC(UniMod:4)NILSMEGVTVK	3	KAVAEVEEMC(UniMod:4)NILSMEGVTVK3	14059.5	19699.2	15040.9
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	KAVDEAADALLK	KAVDEAADALLK	2	KAVDEAADALLK2	4982.93	3364.68	1612.98
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	KAVDEAADALLK	KAVDEAADALLK	3	KAVDEAADALLK3	25011.3	23351.6	18067.6
A0A8I5ZXB9	A0A8I5ZXB9	A0A8I5ZXB9_RAT	Kifap3	Kinesin-associated protein 3	1	KAVDEDLENQTLRK	KAVDEDLENQTLRK	3	KAVDEDLENQTLRK3	2993.51	5572.57	964.008
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	KAVDVFFPPEAQNDFPVAMQISEK	KAVDVFFPPEAQNDFPVAMQISEK	3	KAVDVFFPPEAQNDFPVAMQISEK3	56246.8	60347.4	54302
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	KAVDVLCQCR	KAVDVLC(UniMod:4)QC(UniMod:4)R	3	KAVDVLC(UniMod:4)QC(UniMod:4)R3	18476.3	18284.5	18210.3
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	KAVEHNIQVGR	KAVEHNIQVGR	3	KAVEHNIQVGR3		6214.41	
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	KAVELGVK	KAVELGVK	2	KAVELGVK2	15324.7	9491.07	20413
A0A8I6ANB2	A0A8I6ANB2	A0A8I6ANB2_RAT	Ppfibp1	PPFIA binding protein 1	1	KAVESLMAANEEK	KAVESLMAANEEK	3	KAVESLMAANEEK3	2677.63		
Q7M0E3	Q7M0E3	DEST_RAT	Dstn	Destrin	1	KAVIFCLSADK	KAVIFC(UniMod:4)LSADK	3	KAVIFC(UniMod:4)LSADK3	16596.4	8882.13	14974.6
Q7M0E3	Q7M0E3	DEST_RAT	Dstn	Destrin	1	KAVIFCLSADKK	KAVIFC(UniMod:4)LSADKK	3	KAVIFC(UniMod:4)LSADKK3	10042	8794.26	12891.6
O70467	O70467	ANM3_RAT	Prmt3	Protein arginine N-methyltransferase 3	1	KAVIPEAVVEVVDHK	KAVIPEAVVEVVDHK	3	KAVIPEAVVEVVDHK3	3945.2	5623.11	7843.61
O70467	O70467	ANM3_RAT	Prmt3	Protein arginine N-methyltransferase 3	1	KAVIPEAVVEVVDHK	KAVIPEAVVEVVDHK	4	KAVIPEAVVEVVDHK4	3110.36	3048.57	3789.87
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	KAVIQHFQEK	KAVIQHFQEK	3	KAVIQHFQEK3	29687.3	43431.1	34788.5
P45592	P45592	COF1_RAT	Cfl1	Cofilin-1	1	KAVLFCLSEDK	KAVLFC(UniMod:4)LSEDK	3	KAVLFC(UniMod:4)LSEDK3	23088	36291.2	24276.2
P45592	P45592	COF1_RAT	Cfl1	Cofilin-1	1	KAVLFCLSEDKK	KAVLFC(UniMod:4)LSEDKK	3	KAVLFC(UniMod:4)LSEDKK3	15978.8	33193.9	19388.6
Q63060	Q63060	GLPK_RAT	Gk	Glycerol kinase	1	KAVLGPLVGAVDQGTSSTR	KAVLGPLVGAVDQGTSSTR	3	KAVLGPLVGAVDQGTSSTR3	8987.79	13770.8	13940.3
F7FLA1	F7FLA1	F7FLA1_RAT	Slc35b2	Solute carrier family 35 member B2	1	KAVPTEPAVQKV	KAVPTEPAVQKV	2	KAVPTEPAVQKV2	5145.54	3787.26	2538.7
F7FLA1	F7FLA1	F7FLA1_RAT	Slc35b2	Solute carrier family 35 member B2	1	KAVPTEPAVQKV	KAVPTEPAVQKV	3	KAVPTEPAVQKV3	10830.4	14402.2	12323.4
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	KAVQLTQALDTNTVGALLAEK	KAVQLTQALDTNTVGALLAEK	3	KAVQLTQALDTNTVGALLAEK3	4829.15	4210.6	8623.39
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	KAVSNINTLLDK	KAVSNINTLLDK	3	KAVSNINTLLDK3	4186.29	3672.24	1594.31
P51111	P51111	HD_RAT	Htt	Huntingtin	1	KAVTHAIPALQPIVHDLFVLR	KAVTHAIPALQPIVHDLFVLR	4	KAVTHAIPALQPIVHDLFVLR4	6504.42	4097.58	2539.74
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	KAVYITGK	KAVYITGK	2	KAVYITGK2			1927.67
P11951	P11951;A0A8I5Y1C4;P11950;A0A8I5ZK84	CX6C2_RAT	Cox6c2	Cytochrome c oxidase subunit 6C-2	0	KAYADFYR	KAYADFYR	2	KAYADFYR2	4020.29	4808.43	4405.25
A1A5S1	A1A5S1	PRP6_RAT	Prpf6	Pre-mRNA-processing factor 6	1	KCEHDPHVLLAVAK	KC(UniMod:4)EHDPHVLLAVAK	4	KC(UniMod:4)EHDPHVLLAVAK4	7495.33		
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	KCGTYGIYTK	KC(UniMod:4)GTYGIYTK	2	KC(UniMod:4)GTYGIYTK2	4858.84	14516.2	11096.8
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	KCGTYGIYTK	KC(UniMod:4)GTYGIYTK	3	KC(UniMod:4)GTYGIYTK3	34192.8	33608	35218.4
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	KCLEEQGLK	KC(UniMod:4)LEEQGLK	2	KC(UniMod:4)LEEQGLK2	6326.39	11320.6	4521.48
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	KCLETLAIQCGHK	KC(UniMod:4)LETLAIQC(UniMod:4)GHK	4	KC(UniMod:4)LETLAIQC(UniMod:4)GHK4		6010.94	4244.85
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	KCPELPCSK	KC(UniMod:4)PELPC(UniMod:4)SK	2	KC(UniMod:4)PELPC(UniMod:4)SK2	22452.4	15170.9	20859.7
A0A8I6GEV9	A0A8I6GEV9	A0A8I6GEV9_RAT	Abce1	ATP binding cassette subfamily E member 1	1	KCPFGALSIVNLPSNLEK	KC(UniMod:4)PFGALSIVNLPSNLEK	3	KC(UniMod:4)PFGALSIVNLPSNLEK3	5436.36	7568.19	14556.9
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	KCPFIVALNK	KC(UniMod:4)PFIVALNK	3	KC(UniMod:4)PFIVALNK3	12710.4	18532.8	31589.9
P62282	P62282;A0A8I6AVZ0;A0A8I6AKU9	RS11_RAT	Rps11	Small ribosomal subunit protein uS17	0	KCPFTGNVSIR	KC(UniMod:4)PFTGNVSIR	3	KC(UniMod:4)PFTGNVSIR3	13154.9	20394.3	13041.3
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	KCPHPLQFDPNQDTHFLYVLAAANLYAR	KC(UniMod:4)PHPLQFDPNQDTHFLYVLAAANLYAR	4	KC(UniMod:4)PHPLQFDPNQDTHFLYVLAAANLYAR4	4243.85	4944.55	
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	KCPNCTETAVDGELVVVYDVNR	KC(UniMod:4)PNC(UniMod:4)TETAVDGELVVVYDVNR	3	KC(UniMod:4)PNC(UniMod:4)TETAVDGELVVVYDVNR3	66807.2	62138.3	46773.6
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	KCPNCTETAVDGELVVVYDVNREEK	KC(UniMod:4)PNC(UniMod:4)TETAVDGELVVVYDVNREEK	3	KC(UniMod:4)PNC(UniMod:4)TETAVDGELVVVYDVNREEK3	84876.3	60427.3	81783.6
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	KCPNCTETAVDGELVVVYDVNREEK	KC(UniMod:4)PNC(UniMod:4)TETAVDGELVVVYDVNREEK	4	KC(UniMod:4)PNC(UniMod:4)TETAVDGELVVVYDVNREEK4	250421	351812	320540
D3ZUP8	D3ZUP8	D3ZUP8_RAT	Lmbrd2	LMBR1 domain containing 2	1	KCPTDYQEK	KC(UniMod:4)PTDYQEK	2	KC(UniMod:4)PTDYQEK2			9883.03
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	KCQCDELCTYYQSCCVDYMEQCKPQVTR	KC(UniMod:4)QC(UniMod:4)DELC(UniMod:4)TYYQSC(UniMod:4)C(UniMod:4)VDYMEQC(UniMod:4)KPQVTR	4	KC(UniMod:4)QC(UniMod:4)DELC(UniMod:4)TYYQSC(UniMod:4)C(UniMod:4)VDYMEQC(UniMod:4)KPQVTR4	4.90368e+06	6.20772e+06	5.45273e+06
Q7M0E3	Q7M0E3	DEST_RAT	Dstn	Destrin	1	KCSTPEEIKK	KC(UniMod:4)STPEEIKK	3	KC(UniMod:4)STPEEIKK3			7285.83
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	KCSYTEEAQCIDGTIEIPK	KC(UniMod:4)SYTEEAQC(UniMod:4)IDGTIEIPK	3	KC(UniMod:4)SYTEEAQC(UniMod:4)IDGTIEIPK3	14726.6	17063.3	25741.8
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	KCTEPQQLILK	KC(UniMod:4)TEPQQLILK	2	KC(UniMod:4)TEPQQLILK2	2425.62	4543.96	831.624
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	KCTEPQQLILK	KC(UniMod:4)TEPQQLILK	3	KC(UniMod:4)TEPQQLILK3	16982.9	16566.2	16548.4
P62963	P62963	PROF1_RAT	Pfn1	Profilin-1	1	KCYEMASHLR	KC(UniMod:4)YEMASHLR	3	KC(UniMod:4)YEMASHLR3	5302.85	9639.97	
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	KDACPINGGWSPWSLWDICSVTCGGGVQR	KDAC(UniMod:4)PINGGWSPWSLWDIC(UniMod:4)SVTC(UniMod:4)GGGVQR	4	KDAC(UniMod:4)PINGGWSPWSLWDIC(UniMod:4)SVTC(UniMod:4)GGGVQR4		44722.6	
Q6IFW6	Q6IFW6	K1C10_RAT	Krt10	Keratin, type I cytoskeletal 10	1	KDAEAWFNEK	KDAEAWFNEK	3	KDAEAWFNEK3	21304.8	17562.4	17817.8
Q63525	Q63525	NUDC_RAT	Nudc	Nuclear migration protein nudC	1	KDAENHEVQLK	KDAENHEVQLK	3	KDAENHEVQLK3	9226.35	6069.8	6362.28
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	KDAITTVR	KDAITTVR	2	KDAITTVR2	8507.43	6739.08	
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	KDALLSALSIQNYHLECNETK	KDALLSALSIQNYHLEC(UniMod:4)NETK	3	KDALLSALSIQNYHLEC(UniMod:4)NETK3	20830.5	32028.2	25792.2
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	KDALLSALSIQNYHLECNETK	KDALLSALSIQNYHLEC(UniMod:4)NETK	4	KDALLSALSIQNYHLEC(UniMod:4)NETK4	137380	176857	159198
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	KDASDDLDDLNFFNQK	KDASDDLDDLNFFNQK	2	KDASDDLDDLNFFNQK2	2016.71	3617.92	
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	KDASDDLDDLNFFNQK	KDASDDLDDLNFFNQK	3	KDASDDLDDLNFFNQK3	55252.5	71489.7	50287.5
F1M7P8	F1M7P8	F1M7P8_RAT	Spryd3	SPRY domain containing 3	1	KDAVVPSGGFFPTIGMLSCGEK	KDAVVPSGGFFPTIGMLSC(UniMod:4)GEK	3	KDAVVPSGGFFPTIGMLSC(UniMod:4)GEK3	3431.13		
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	KDCCFEICAPDK	KDC(UniMod:4)C(UniMod:4)FEIC(UniMod:4)APDK	2	KDC(UniMod:4)C(UniMod:4)FEIC(UniMod:4)APDK2	26408.3	21559.5	14401.8
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	KDCCFEICAPDK	KDC(UniMod:4)C(UniMod:4)FEIC(UniMod:4)APDK	3	KDC(UniMod:4)C(UniMod:4)FEIC(UniMod:4)APDK3	247201	264600	260505
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	KDCCFEICAPDKR	KDC(UniMod:4)C(UniMod:4)FEIC(UniMod:4)APDKR	2	KDC(UniMod:4)C(UniMod:4)FEIC(UniMod:4)APDKR2	8270.89	4519.07	10258.6
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	KDCCFEICAPDKR	KDC(UniMod:4)C(UniMod:4)FEIC(UniMod:4)APDKR	3	KDC(UniMod:4)C(UniMod:4)FEIC(UniMod:4)APDKR3	548915	605908	627951
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	KDCCFEICAPDKR	KDC(UniMod:4)C(UniMod:4)FEIC(UniMod:4)APDKR	4	KDC(UniMod:4)C(UniMod:4)FEIC(UniMod:4)APDKR4	691950	786255	795705
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	KDCDIVSR	KDC(UniMod:4)DIVSR	2	KDC(UniMod:4)DIVSR2		5938.38	
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	KDCTETPSLEPPAMSLSTVAK	KDC(UniMod:4)TETPSLEPPAMSLSTVAK	3	KDC(UniMod:4)TETPSLEPPAMSLSTVAK3	465012	555595	516737
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	KDDDDEEIGGPK	KDDDDEEIGGPK	3	KDDDDEEIGGPK3	68995.8	49333.7	62088.4
B0K013	B0K013	B0K013_RAT	Coa4	Cytochrome c oxidase assembly factor 4 homolog	1	KDDEEEDPLDQLITR	KDDEEEDPLDQLITR	3	KDDEEEDPLDQLITR3	1775.11	2851.26	3665.1
Q91V33	Q91V33	KHDR1_RAT	Khdrbs1	KH domain-containing, RNA-binding, signal transduction-associated protein 1	1	KDDEENYLDLFSHK	KDDEENYLDLFSHK	2	KDDEENYLDLFSHK2	2279.39		
Q91V33	Q91V33	KHDR1_RAT	Khdrbs1	KH domain-containing, RNA-binding, signal transduction-associated protein 1	1	KDDEENYLDLFSHK	KDDEENYLDLFSHK	3	KDDEENYLDLFSHK3	86621.3	13321.9	4512.33
Q91V33	Q91V33	KHDR1_RAT	Khdrbs1	KH domain-containing, RNA-binding, signal transduction-associated protein 1	1	KDDEENYLDLFSHK	KDDEENYLDLFSHK	4	KDDEENYLDLFSHK4	10576.8		
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	KDDESNLVEEK	KDDESNLVEEK	2	KDDESNLVEEK2	10396.1	6530.09	7815.87
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	KDDESNLVEEK	KDDESNLVEEK	3	KDDESNLVEEK3	37066.8	49549.5	37363.3
A0A8I6ANL9	A0A8I6ANL9	A0A8I6ANL9_RAT	Cdc23	Cell division cycle 23	1	KDDETVDSLGPLEK	KDDETVDSLGPLEK	3	KDDETVDSLGPLEK3	4010.06	8921.24	6707.3
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	KDDGISFSNQTGPAWAGSER	KDDGISFSNQTGPAWAGSER	3	KDDGISFSNQTGPAWAGSER3	40523.9	44491.3	35506
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	KDDGISFSNQTGPAWAGSERDYTYEELLNR	KDDGISFSNQTGPAWAGSERDYTYEELLNR	4	KDDGISFSNQTGPAWAGSERDYTYEELLNR4		14265.3	12239.1
Q6TA25	Q6TA25	FGOP2_RAT	Fgfr1op2	FGFR1 oncogene partner 2 homolog	1	KDDPGIIMK	KDDPGIIMK	2	KDDPGIIMK2	42176.8	26671.1	28991.2
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	KDDPLTNLNTAFDVAER	KDDPLTNLNTAFDVAER	2	KDDPLTNLNTAFDVAER2	39691.1	45993.9	43626.4
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	KDDPLTNLNTAFDVAER	KDDPLTNLNTAFDVAER	3	KDDPLTNLNTAFDVAER3	270096	292335	315280
P22062	P22062	PIMT_RAT	Pcmt1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase	1	KDDPMLLSSGR	KDDPMLLSSGR	3	KDDPMLLSSGR3	83943	79674.1	69479.3
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	KDDPVTNLNNAFEVAEK	KDDPVTNLNNAFEVAEK	2	KDDPVTNLNNAFEVAEK2	3769	4425.43	1015.04
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	KDDPVTNLNNAFEVAEK	KDDPVTNLNNAFEVAEK	3	KDDPVTNLNNAFEVAEK3	56242.5	29221.3	45398.9
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	KDDSVGYR	KDDSVGYR	2	KDDSVGYR2	10922.5		13335.6
P35565	P35565	CALX_RAT	Canx	Calnexin	1	KDDTDDEIAK	KDDTDDEIAK	2	KDDTDDEIAK2	230909	246105	304200
P35565	P35565	CALX_RAT	Canx	Calnexin	1	KDDTDDEIAK	KDDTDDEIAK	3	KDDTDDEIAK3	69510.4	89263.7	87035.8
Q9JMB5	Q9JMB5	ADRM1_RAT	Adrm1	Proteasomal ubiquitin receptor ADRM1	1	KDEEEDMSLD	KDEEEDMSLD	2	KDEEEDMSLD2	21181.6	11507.7	15909.1
Q4V899	Q4V899	TM165_RAT	Tmem165	Transmembrane protein 165	1	KDEEFQR	KDEEFQR	2	KDEEFQR2	30675.2		27025.3
Q6IRE4	Q6IRE4	TS101_RAT	Tsg101	Tumor susceptibility gene 101 protein	1	KDEELSSALEK	KDEELSSALEK	2	KDEELSSALEK2	7285.2	4083.04	1768.52
Q6IRE4	Q6IRE4	TS101_RAT	Tsg101	Tumor susceptibility gene 101 protein	1	KDEELSSALEK	KDEELSSALEK	3	KDEELSSALEK3	28629.6	24301.5	22148.9
Q62871	Q62871	DC1I2_RAT	Dync1i2	Cytoplasmic dynein 1 intermediate chain 2	1	KDEENDSKAPPHELTEEEK	KDEENDSKAPPHELTEEEK	4	KDEENDSKAPPHELTEEEK4	7944.05	7667.26	14640.2
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	KDEESAMLR	KDEESAMLR	2	KDEESAMLR2	35698.9	41779.8	39576.4
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	KDEESGGGSNPLQHLEK	KDEESGGGSNPLQHLEK	3	KDEESGGGSNPLQHLEK3	44875.9	64612.1	52320.8
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	KDEESGGGSNPLQHLEK	KDEESGGGSNPLQHLEK	4	KDEESGGGSNPLQHLEK4	71313.8	76560.9	60621.3
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	KDEESGSGSNPFQHLEK	KDEESGSGSNPFQHLEK	2	KDEESGSGSNPFQHLEK2	2020.31	2896.27	
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	KDEESGSGSNPFQHLEK	KDEESGSGSNPFQHLEK	3	KDEESGSGSNPFQHLEK3	35056.2	35748.5	19529.3
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	KDEESGSGSNPFQHLEK	KDEESGSGSNPFQHLEK	4	KDEESGSGSNPFQHLEK4	32364.3	33580.4	56148.2
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	KDEGTGTLR	KDEGTGTLR	2	KDEGTGTLR2	312869		415875
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	KDEGTGTLRK	KDEGTGTLRK	2	KDEGTGTLRK2			59898.5
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	KDEILGIANNR	KDEILGIANNR	2	KDEILGIANNR2	27145.6	23131.9	22991.9
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	KDEILGIANNR	KDEILGIANNR	3	KDEILGIANNR3	268449	253030	283754
P36876	P56932;P36876	2ABA_RAT	Ppp2r2a	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	0	KDEISVDSLDFNK	KDEISVDSLDFNK	3	KDEISVDSLDFNK3	9528.39	8509.38	12734.5
P36876	P56932;P36876	2ABA_RAT	Ppp2r2a	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	0	KDEISVDSLDFNKK	KDEISVDSLDFNKK	3	KDEISVDSLDFNKK3	14190.3	12222	7684.79
P36876	P56932;P36876	2ABA_RAT	Ppp2r2a	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	0	KDEISVDSLDFNKK	KDEISVDSLDFNKK	4	KDEISVDSLDFNKK4	8962.02	9768.96	7213.89
P08460	P08460	NID1_RAT	Nid1	Nidogen-1 (Fragment)	1	KDENQVPAVVGFSK	KDENQVPAVVGFSK	2	KDENQVPAVVGFSK2	97370.6	104342	96352.6
P08460	P08460	NID1_RAT	Nid1	Nidogen-1 (Fragment)	1	KDENQVPAVVGFSK	KDENQVPAVVGFSK	3	KDENQVPAVVGFSK3	584347	759733	761334
F7ELS2	F7ELS2;A0A8I6GM53	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	0	KDEPIDLFMVEIMEMK	KDEPIDLFMVEIMEMK	3	KDEPIDLFMVEIMEMK3	25386.8	16636.1	14771.3
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	KDEQEHEFYK	KDEQEHEFYK	2	KDEQEHEFYK2	1766.1	382.535	1361.33
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	KDEQEHEFYK	KDEQEHEFYK	3	KDEQEHEFYK3	30228.7	19620.6	29428
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	KDEQTGAITVAR	KDEQTGAITVAR	2	KDEQTGAITVAR2	2806.82		
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	KDEQTGAITVAR	KDEQTGAITVAR	3	KDEQTGAITVAR3	25272.5	26431	33365.9
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	KDETIQHTEVFCYASQDVEDSMQETDPLQK	KDETIQHTEVFC(UniMod:4)YASQDVEDSMQETDPLQK	4	KDETIQHTEVFC(UniMod:4)YASQDVEDSMQETDPLQK4	9643.2	7358.97	8933.08
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	KDEVCVKPGLCR	KDEVC(UniMod:4)VKPGLC(UniMod:4)R	3	KDEVC(UniMod:4)VKPGLC(UniMod:4)R3	86491.8	85600	88520.3
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	KDFIATQGPLPNTLK	KDFIATQGPLPNTLK	2	KDFIATQGPLPNTLK2	12928.2	14186.3	17402.7
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	KDFIATQGPLPNTLK	KDFIATQGPLPNTLK	3	KDFIATQGPLPNTLK3	128672	131680	162167
A0A8I6A1Z5	A0A8I6A1Z5	A0A8I6A1Z5_RAT	Tmx1	Thioredoxin-related transmembrane protein 1	1	KDFINFISEK	KDFINFISEK	2	KDFINFISEK2	49774.7	34189.3	51493.2
A0A8I6A1Z5	A0A8I6A1Z5	A0A8I6A1Z5_RAT	Tmx1	Thioredoxin-related transmembrane protein 1	1	KDFINFISEK	KDFINFISEK	3	KDFINFISEK3	59408.8	48887.2	71658.4
P29266	P29266	3HIDH_RAT	Hibadh	3-hydroxyisobutyrate dehydrogenase, mitochondrial	1	KDFSSVFQYLR	KDFSSVFQYLR	2	KDFSSVFQYLR2	3812.58		1459.57
P29266	P29266	3HIDH_RAT	Hibadh	3-hydroxyisobutyrate dehydrogenase, mitochondrial	1	KDFSSVFQYLR	KDFSSVFQYLR	3	KDFSSVFQYLR3	6446.21	4553.79	7723.99
P29266	P29266	3HIDH_RAT	Hibadh	3-hydroxyisobutyrate dehydrogenase, mitochondrial	1	KDFSSVFQYLREEETF	KDFSSVFQYLREEETF	3	KDFSSVFQYLREEETF3	5789.85	9488.16	3824.71
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	KDFTELQK	KDFTELQK	2	KDFTELQK2	9634.18	9937.51	9616.44
P08650	P08650	CO5_RAT	C5	Complement C5	1	KDFTTTGTAYFEVK	KDFTTTGTAYFEVK	2	KDFTTTGTAYFEVK2	2121.32	3735.9	2795.19
P08650	P08650	CO5_RAT	C5	Complement C5	1	KDFTTTGTAYFEVK	KDFTTTGTAYFEVK	3	KDFTTTGTAYFEVK3	58967.3	38647	58931.5
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	KDFVSEAYLITLGK	KDFVSEAYLITLGK	3	KDFVSEAYLITLGK3	11089.3	5462.5	5105.36
P05065	P09117;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	KDGADFAK	KDGADFAK	1	KDGADFAK1	1039.08	3631.59	2615.59
P05065	P09117;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	KDGADFAK	KDGADFAK	2	KDGADFAK2	146956	132461	140756
P01048	P08932;A0A0G2KA54;P01048	KNT1_RAT	Map1	T-kininogen 1	0	KDGAETLYSFK	KDGAETLYSFK	2	KDGAETLYSFK2	102987	106298	98517
P01048	P08932;A0A0G2KA54;P01048	KNT1_RAT	Map1	T-kininogen 1	0	KDGAETLYSFK	KDGAETLYSFK	3	KDGAETLYSFK3	387813	424257	451819
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	KDGALHMIGSLAEILLK	KDGALHMIGSLAEILLK	3	KDGALHMIGSLAEILLK3	30032.2	11362.4	15889.6
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	KDGALHMIGSLAEILLK	KDGALHMIGSLAEILLK	4	KDGALHMIGSLAEILLK4	5013.9	3169.05	7712.46
Q60GF7	Q60GF7	PIGX_RAT	Pigx	Phosphatidylinositol-glycan biosynthesis class X protein	1	KDGDTLIVVNNPDLLMHCDQEFPILK	KDGDTLIVVNNPDLLMHC(UniMod:4)DQEFPILK	4	KDGDTLIVVNNPDLLMHC(UniMod:4)DQEFPILK4	5604.56	10139.4	8273.79
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	KDGDWWTGTVGETSGVFPSNYVR	KDGDWWTGTVGETSGVFPSNYVR	3	KDGDWWTGTVGETSGVFPSNYVR3	22747.2	23346.5	23178
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	KDGFCLSGSILAK	KDGFC(UniMod:4)LSGSILAK	3	KDGFC(UniMod:4)LSGSILAK3	2899.05		
Q3ZAU4	Q3ZAU4	Q3ZAU4_RAT	Kazald1	Kazal-type serine peptidase inhibitor domain 1	1	KDGLDIQLPGDDPHISVQFR	KDGLDIQLPGDDPHISVQFR	4	KDGLDIQLPGDDPHISVQFR4	13277.2	7192.44	7524.45
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	KDGSCGVAYVVQEPGDYEVSVK	KDGSC(UniMod:4)GVAYVVQEPGDYEVSVK	3	KDGSC(UniMod:4)GVAYVVQEPGDYEVSVK3	213005	186509	192403
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	KDGSFGAWLDR	KDGSFGAWLDR	2	KDGSFGAWLDR2	269253	276280	189221
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	KDGSFGAWLDR	KDGSFGAWLDR	3	KDGSFGAWLDR3	2.35102e+06	2.81349e+06	2.31528e+06
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	KDGSFGAWLDRDSSTWLTAFVLK	KDGSFGAWLDRDSSTWLTAFVLK	3	KDGSFGAWLDRDSSTWLTAFVLK3	120636	154779	144234
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	KDGSFGAWLDRDSSTWLTAFVLK	KDGSFGAWLDRDSSTWLTAFVLK	4	KDGSFGAWLDRDSSTWLTAFVLK4	672618	714933	754445
P08649	P08649	CO4_RAT	C4	Complement C4	1	KDGSFGAWLHR	KDGSFGAWLHR	2	KDGSFGAWLHR2	520661	582576	524845
P08649	P08649	CO4_RAT	C4	Complement C4	1	KDGSFGAWLHR	KDGSFGAWLHR	3	KDGSFGAWLHR3	31633.6	33804.5	49577.3
P08649	P08649	CO4_RAT	C4	Complement C4	1	KDGSFGAWLHRDSSTWLTAFVLK	KDGSFGAWLHRDSSTWLTAFVLK	4	KDGSFGAWLHRDSSTWLTAFVLK4	9059.31	8429.39	8596.31
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	KDGTFLNLVSDDR	KDGTFLNLVSDDR	3	KDGTFLNLVSDDR3	3779.15	4987.21	1162.36
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	KDGTFLNLVSDDRR	KDGTFLNLVSDDRR	3	KDGTFLNLVSDDRR3	98394.8	71799.6	78446.3
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	KDGTFLNLVSDDRR	KDGTFLNLVSDDRR	4	KDGTFLNLVSDDRR4	26921.3	62785.2	57751.2
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	KDGTHVVENVDATHIGK	KDGTHVVENVDATHIGK	3	KDGTHVVENVDATHIGK3	79046.6	59006	52733
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	KDGTHVVENVDATHIGK	KDGTHVVENVDATHIGK	4	KDGTHVVENVDATHIGK4	384669	315228	351990
D3ZWA8	D3ZWA8	D3ZWA8_RAT	Appl1	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1	1	KDHEEWICTINNISK	KDHEEWIC(UniMod:4)TINNISK	3	KDHEEWIC(UniMod:4)TINNISK3	8109.12	5378.68	8409.14
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	KDHSFLGFEWQK	KDHSFLGFEWQK	2	KDHSFLGFEWQK2	3924.03		
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	KDHSFLGFEWQK	KDHSFLGFEWQK	3	KDHSFLGFEWQK3	72669.1	71598.6	68542.7
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	KDHSFLGFEWQK	KDHSFLGFEWQK	4	KDHSFLGFEWQK4	44786.3	49432.4	36803.1
Q9Z1A5	Q9Z1A5	ULA1_RAT	Nae1	NEDD8-activating enzyme E1 regulatory subunit	1	KDHSHTPWIVIIAK	KDHSHTPWIVIIAK	4	KDHSHTPWIVIIAK4	2853.47	5655.91	7435.02
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	KDHVFVR	KDHVFVR	2	KDHVFVR2		7916.73	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	KDIDAVQTWNLEK	KDIDAVQTWNLEK	3	KDIDAVQTWNLEK3	3859.49	3270.14	7895.97
Q29RW1	F7F0L5;P02563;P12847;Q29RW1	MYH4_RAT	Myh4	Myosin-4	0	KDIDDLELTLAK	KDIDDLELTLAK	2	KDIDDLELTLAK2	2242.12	961.219	
Q29RW1	F7F0L5;P02563;P12847;Q29RW1	MYH4_RAT	Myh4	Myosin-4	0	KDIDDLELTLAK	KDIDDLELTLAK	3	KDIDDLELTLAK3	18114.3	16699.2	16793.8
P08461	A0A8I6B5J2;P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	0	KDIDSFVPTK	KDIDSFVPTK	2	KDIDSFVPTK2	23143	20746.4	18384.3
P08461	A0A8I6B5J2;P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	0	KDIDSFVPTK	KDIDSFVPTK	3	KDIDSFVPTK3	50368.1	58475.8	68384.1
Q99P63	Q99P63	MICU2_RAT	Micu2	Calcium uptake protein 2, mitochondrial	1	KDIEDVLSGIQTAR	KDIEDVLSGIQTAR	2	KDIEDVLSGIQTAR2	3010.77	2104.16	2892.99
Q99P63	Q99P63	MICU2_RAT	Micu2	Calcium uptake protein 2, mitochondrial	1	KDIEDVLSGIQTAR	KDIEDVLSGIQTAR	3	KDIEDVLSGIQTAR3	68175.7	78968.3	70058
A0A096MJE3	A0A096MJE3	A0A096MJE3_RAT	Gspt2	G1 to S phase transition 2	1	KDIHFMPCSGLTGANIK	KDIHFMPC(UniMod:4)SGLTGANIK	3	KDIHFMPC(UniMod:4)SGLTGANIK3	32522.3	28796.1	23256.2
A0A096MJE3	A0A096MJE3	A0A096MJE3_RAT	Gspt2	G1 to S phase transition 2	1	KDIHFMPCSGLTGANIK	KDIHFMPC(UniMod:4)SGLTGANIK	4	KDIHFMPC(UniMod:4)SGLTGANIK4		146413	137581
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	KDIHFMPCSGLTGANLK	KDIHFMPC(UniMod:4)SGLTGANLK	2	KDIHFMPC(UniMod:4)SGLTGANLK2	2754.45	3391.29	3991.07
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	KDIHFMPCSGLTGANLK	KDIHFMPC(UniMod:4)SGLTGANLK	3	KDIHFMPC(UniMod:4)SGLTGANLK3	59598.4	70529.6	60058
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	KDIHFMPCSGLTGANLK	KDIHFMPC(UniMod:4)SGLTGANLK	4	KDIHFMPC(UniMod:4)SGLTGANLK4	61285.2		68122
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	KDILGASDPYVR	KDILGASDPYVR	2	KDILGASDPYVR2	79126.8	72985.3	76797.3
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	KDILGASDPYVR	KDILGASDPYVR	3	KDILGASDPYVR3	339997	422032	401365
D3ZU52	D3ZU52;A0A8I6GIJ6	D3ZU52_RAT	Cops7b	COP9 signalosome subunit 7B	0	KDINNIVK	KDINNIVK	2	KDINNIVK2	8193.05	11232.4	7014.94
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	KDIPIDGK	KDIPIDGK	2	KDIPIDGK2	9282.91	8773.83	10387
P18331	P18331	INHBA_RAT	Inhba	Inhibin beta A chain	1	KDIQNMIVEECGCS	KDIQNMIVEEC(UniMod:4)GC(UniMod:4)S	2	KDIQNMIVEEC(UniMod:4)GC(UniMod:4)S2	915.755		
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	KDISENK	KDISENK	2	KDISENK2	424.717		2787.17
M0R915	M0R915;A0A8I6GLQ4	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	0	KDIVQCFSCGGCMENWK	KDIVQC(UniMod:4)FSC(UniMod:4)GGC(UniMod:4)MENWK	3	KDIVQC(UniMod:4)FSC(UniMod:4)GGC(UniMod:4)MENWK3		14770	8884.06
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	KDKEIIAEYDTQVK	KDKEIIAEYDTQVK	3	KDKEIIAEYDTQVK3	11489.7	11304.3	9569.86
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	KDKEIIAEYEAQIK	KDKEIIAEYEAQIK	3	KDKEIIAEYEAQIK3	16957.5	15832.4	13073.1
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	KDKGQDDFLGNVMLR	KDKGQDDFLGNVMLR	3	KDKGQDDFLGNVMLR3	26320.3	34999.1	32183.9
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	KDKGQDDFLGNVMLR	KDKGQDDFLGNVMLR	4	KDKGQDDFLGNVMLR4	29237.9	38677.8	41390.8
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	KDLAVEDIISR	KDLAVEDIISR	2	KDLAVEDIISR2	18461.7	13631	12239.7
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	KDLAVEDIISR	KDLAVEDIISR	3	KDLAVEDIISR3	59575	62949.8	60146.4
P51146	P51146	RAB4B_RAT	Rab4b	Ras-related protein Rab-4B	1	KDLDPEREVTFLEASR	KDLDPEREVTFLEASR	4	KDLDPEREVTFLEASR4	7309.32	13336.1	10943.2
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	KDLDSLCYLLIPSADSPEALHR	KDLDSLC(UniMod:4)YLLIPSADSPEALHR	4	KDLDSLC(UniMod:4)YLLIPSADSPEALHR4	7590.86	8749.03	17498.6
P08082	P08082	CLCB_RAT	Cltb	Clathrin light chain B	1	KDLEEWNQR	KDLEEWNQR	2	KDLEEWNQR2	8700.46	13209.3	10676.9
P08082	P08082	CLCB_RAT	Cltb	Clathrin light chain B	1	KDLEEWNQR	KDLEEWNQR	3	KDLEEWNQR3	77565	67345.2	79016.8
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	KDLEIGEYK	KDLEIGEYK	2	KDLEIGEYK2	41394.1	55641.9	48332.3
P04897	P10824;D4AA42;P04897;P08753	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	0	KDLFEEK	KDLFEEK	2	KDLFEEK2	264607	215882	242836
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	KDLHFLMECNHEYK	KDLHFLMEC(UniMod:4)NHEYK	3	KDLHFLMEC(UniMod:4)NHEYK3	4127.75		
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	KDLHFLMECNHEYK	KDLHFLMEC(UniMod:4)NHEYK	4	KDLHFLMEC(UniMod:4)NHEYK4	22137	27378	16620.6
Q8CIZ5	F1LVL9;Q8CIZ5	DMBT1_RAT	Dmbt1	Deleted in malignant brain tumors 1 protein	0	KDLHIHVSCK	KDLHIHVSC(UniMod:4)K	3	KDLHIHVSC(UniMod:4)K3	11174.4	13072.1	12224.6
P82471	P82471;A0A8J8XRQ3	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	0	KDLLEEK	KDLLEEK	2	KDLLEEK2	65376.6	58479.6	57010.7
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	KDLLSEK	KDLLSEK	2	KDLLSEK2	116055	78981	103891
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	KDLPEEPAPVRR	KDLPEEPAPVRR	3	KDLPEEPAPVRR3	9606.1	7300.34	12936.9
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	KDLQDAENFFQFQGDADDLK	KDLQDAENFFQFQGDADDLK	3	KDLQDAENFFQFQGDADDLK3	13228.7	13618.1	21106.2
F1M386	F1M386	RPGF2_RAT	Rapgef2	Rap guanine nucleotide exchange factor 2	1	KDLTFLHEGNDSK	KDLTFLHEGNDSK	3	KDLTFLHEGNDSK3		9857.76	
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	KDLTTFLESQK	KDLTTFLESQK	2	KDLTTFLESQK2	11181.8	8754.6	5834.52
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	KDLTTFLESQK	KDLTTFLESQK	3	KDLTTFLESQK3	96000.2	75117.5	113261
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	KDLTTFLESQKK	KDLTTFLESQKK	3	KDLTTFLESQKK3	28961.8	30187.5	36070.8
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	KDLVASHHR	KDLVASHHR	2	KDLVASHHR2			15781.5
D3ZUU6	D3ZUU6	D3ZUU6_RAT	Clec3b	C-type lectin domain family 3, member B	1	KDLVSPK	KDLVSPK	2	KDLVSPK2		23566.3	
A0A8I6AT07	A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	1	KDLWVYKPAQNSWHQLADR	KDLWVYKPAQNSWHQLADR	4	KDLWVYKPAQNSWHQLADR4	7063.6		
P60711	P60711;P63259	ACTB_RAT	Actb	Actin, cytoplasmic 1	0	KDLYANTVLSGGTTMYPGIADR	KDLYANTVLSGGTTMYPGIADR	3	KDLYANTVLSGGTTMYPGIADR3	715204	673801	637712
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	KDMSGHYQNALYLGDVSER	KDMSGHYQNALYLGDVSER	3	KDMSGHYQNALYLGDVSER3	1861.91	9403.75	8738.81
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	KDMSGHYQNALYLGDVSER	KDMSGHYQNALYLGDVSER	4	KDMSGHYQNALYLGDVSER4	31876.4	32692.3	35055
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	KDMVDVK	KDMVDVK	2	KDMVDVK2	22144.3	17499.6	18709.4
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	KDNAVITPSSSSR	KDNAVITPSSSSR	3	KDNAVITPSSSSR3	4491.83	7214.39	
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	KDNCPNLPNSGQEDYDK	KDNC(UniMod:4)PNLPNSGQEDYDK	3	KDNC(UniMod:4)PNLPNSGQEDYDK3	974053	986991	1.09798e+06
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	KDNDFIYHDR	KDNDFIYHDR	2	KDNDFIYHDR2	2336.98		1885.11
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	KDNDFIYHDR	KDNDFIYHDR	3	KDNDFIYHDR3	61568.2	44460.2	47591.6
P97881	P97881	MUC13_RAT	Muc13	Mucin-13	1	KDNGAMECGCMAGYR	KDNGAMEC(UniMod:4)GC(UniMod:4)MAGYR	3	KDNGAMEC(UniMod:4)GC(UniMod:4)MAGYR3	1351.24	2829.98	4832.51
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	KDNHLNFNK	KDNHLNFNK	2	KDNHLNFNK2	1553.1		
D3ZD73	D3ZD73;A0A8I6A3H5;A0A8I5Y7L2	D3ZD73_RAT	Ddx6	DEAD-box helicase 6	0	KDNIQAMVIVPTR	KDNIQAMVIVPTR	3	KDNIQAMVIVPTR3	16026.8	11484	6348.98
A0A8I6AWS0	A0A8I6AWS0	A0A8I6AWS0_RAT	Npc2	NPC intracellular cholesterol transporter 2	1	KDNLFCWEIPVEIK	KDNLFC(UniMod:4)WEIPVEIK	3	KDNLFC(UniMod:4)WEIPVEIK3	7960.42	5581.68	5766.98
A0A8I6AWS0	A0A8I6AWS0	A0A8I6AWS0_RAT	Npc2	NPC intracellular cholesterol transporter 2	1	KDNLFCWEIPVEIKG	KDNLFC(UniMod:4)WEIPVEIKG	3	KDNLFC(UniMod:4)WEIPVEIKG3	12575.2	10532.6	17193.4
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	KDNLNDDGVDMK	KDNLNDDGVDMK	2	KDNLNDDGVDMK2	4027.05	3068.87	
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	KDNLNDDGVDMK	KDNLNDDGVDMK	3	KDNLNDDGVDMK3	12715.1	24486.8	9433.59
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	KDNSGQIFSVVSNGK	KDNSGQIFSVVSNGK	2	KDNSGQIFSVVSNGK2	130908	124345	118315
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	KDNSGQIFSVVSNGK	KDNSGQIFSVVSNGK	3	KDNSGQIFSVVSNGK3	2.91801e+06	3.2458e+06	3.25404e+06
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	KDNSNSLQVK	KDNSNSLQVK	2	KDNSNSLQVK2		20878.8	
P70541	P70541	EI2BG_RAT	Eif2b3	Translation initiation factor eIF-2B subunit gamma	1	KDNTLTLAPYDACWNAFR	KDNTLTLAPYDAC(UniMod:4)WNAFR	3	KDNTLTLAPYDAC(UniMod:4)WNAFR3	9531.58	9718.57	4444.47
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	KDNYPQSVPR	KDNYPQSVPR	2	KDNYPQSVPR2	37471	37202.4	32411.6
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	KDNYPQSVPR	KDNYPQSVPR	3	KDNYPQSVPR3	66758.7	78336.8	84053.8
P04916	P04916	RET4_RAT	Rbp4	Retinol-binding protein 4	1	KDPEGLFLQDNIIAEFSVDEK	KDPEGLFLQDNIIAEFSVDEK	3	KDPEGLFLQDNIIAEFSVDEK3	30059.3	24895.6	12812.9
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	KDPELWGSVLLESNPYR	KDPELWGSVLLESNPYR	3	KDPELWGSVLLESNPYR3	64599.6	50738.4	71526.7
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	KDPELWGSVLLESNPYRR	KDPELWGSVLLESNPYRR	3	KDPELWGSVLLESNPYRR3	31927.2	32495.8	33821.9
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	KDPELWGSVLLESNPYRR	KDPELWGSVLLESNPYRR	4	KDPELWGSVLLESNPYRR4	30335	21188.1	23886.5
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	KDPPPKDPVIETIR	KDPPPKDPVIETIR	2	KDPPPKDPVIETIR2	7.96758e+06	5.5737e+06	4.78685e+06
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	KDPPPKDPVIETIR	KDPPPKDPVIETIR	3	KDPPPKDPVIETIR3	5.0596e+07	3.63095e+07	3.33819e+07
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	KDPPPKDPVIETIR	KDPPPKDPVIETIR	4	KDPPPKDPVIETIR4	2.20833e+07	1.71685e+07	1.85266e+07
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	KDPPWITLVQTEPK	KDPPWITLVQTEPK	3	KDPPWITLVQTEPK3	45785.1	60759.7	45666.8
Q499P3	Q499P3	C1GLC_RAT	C1galt1c1	C1GALT1-specific chaperone 1	1	KDPSQPFYLGHTVK	KDPSQPFYLGHTVK	3	KDPSQPFYLGHTVK3	5276.44	3548.34	7723.15
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	KDPSSVDIK	KDPSSVDIK	2	KDPSSVDIK2	12853.2	23708.1	13168.3
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	KDPSSVDIKK	KDPSSVDIKK	2	KDPSSVDIKK2	5636.21		2850.9
D3ZD11	D3ZD11	D3ZD11_RAT	Spcs2	Signal peptidase complex subunit 2	1	KDPTGMDPDDIWQLSSSLK	KDPTGMDPDDIWQLSSSLK	3	KDPTGMDPDDIWQLSSSLK3	65843	51092	59581.6
D3ZD11	D3ZD11	D3ZD11_RAT	Spcs2	Signal peptidase complex subunit 2	1	KDPTGMDPDDIWQLSSSLKR	KDPTGMDPDDIWQLSSSLKR	4	KDPTGMDPDDIWQLSSSLKR4	8903.77	7697.26	5870.29
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	KDPTIETTEFSDFDLLDALS	KDPTIETTEFSDFDLLDALS	3	KDPTIETTEFSDFDLLDALS3	76496.6	71363.3	65602.7
D3ZZL3	D3ZZL3	D3ZZL3_RAT	Naglu	N-acetyl-alpha-glucosaminidase	1	KDPVPDLVAWVSSFASR	KDPVPDLVAWVSSFASR	3	KDPVPDLVAWVSSFASR3	5881.35	5285.65	8491.6
B5DF93	B5DF93	PATL1_RAT	Patl1	Protein PAT1 homolog 1	1	KDPYANLMLQR	KDPYANLMLQR	3	KDPYANLMLQR3	9262.37	10307.4	22760.4
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	KDPYTATMVGFSK	KDPYTATMVGFSK	2	KDPYTATMVGFSK2	5180.85	6697.9	8241.35
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	KDPYTATMVGFSK	KDPYTATMVGFSK	3	KDPYTATMVGFSK3	17546.1	18066.5	9071.95
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KDQGELER	KDQGELER	2	KDQGELER2			1.48258e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KDQGELERQLLQANPILEAFGNAK	KDQGELERQLLQANPILEAFGNAK	4	KDQGELERQLLQANPILEAFGNAK4	8736.19	15926.5	20427
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	KDQGPSEAELER	KDQGPSEAELER	3	KDQGPSEAELER3	15753.6	12756.9	8820.08
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	KDQINIETK	KDQINIETK	2	KDQINIETK2	3504.15	3728.62	
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	KDQNVLSPVNCWNLLLNQVK	KDQNVLSPVNC(UniMod:4)WNLLLNQVK	3	KDQNVLSPVNC(UniMod:4)WNLLLNQVK3	8306.76	4025.63	4167.91
F7FQB8	F7FQB8	F7FQB8_RAT	Kpna4	Karyopherin subunit alpha 4	1	KDQVAYLIQQNVIPPFCNLLTVK	KDQVAYLIQQNVIPPFC(UniMod:4)NLLTVK	3	KDQVAYLIQQNVIPPFC(UniMod:4)NLLTVK3	14773.5	30265.9	10320.8
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	KDQYLLSPVNCWYLVLHQTR	KDQYLLSPVNC(UniMod:4)WYLVLHQTR	3	KDQYLLSPVNC(UniMod:4)WYLVLHQTR3	5248.07	6268.48	5904.62
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	KDQYLLSPVNCWYLVLHQTR	KDQYLLSPVNC(UniMod:4)WYLVLHQTR	4	KDQYLLSPVNC(UniMod:4)WYLVLHQTR4	15971	5726	12211.2
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	KDSAIQQQVANLQMK	KDSAIQQQVANLQMK	3	KDSAIQQQVANLQMK3		4809.36	
A0A0G2JVT8	A0A8I6ARY9;A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	0	KDSEGLK	KDSEGLK	2	KDSEGLK2			792195
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	KDSEGYSESPDLEFEYADTDK	KDSEGYSESPDLEFEYADTDK	3	KDSEGYSESPDLEFEYADTDK3	5140.05	5286.74	7364.98
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	KDSETGENIR	KDSETGENIR	2	KDSETGENIR2	7581.66		24989.1
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	KDSETGENIR	KDSETGENIR	3	KDSETGENIR3			50502.3
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	KDSFYVPIFYSSK	KDSFYVPIFYSSK	2	KDSFYVPIFYSSK2	18484.3	17792.4	17570.3
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	KDSFYVPIFYSSK	KDSFYVPIFYSSK	3	KDSFYVPIFYSSK3	92374.5	111683	102164
P0C5H9	P0C5H9	MANF_RAT	Manf	Mesencephalic astrocyte-derived neurotrophic factor	1	KDSQICELK	KDSQIC(UniMod:4)ELK	2	KDSQIC(UniMod:4)ELK2	2893.46	3045.79	
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	KDTEEDSVTATLAAAQK	KDTEEDSVTATLAAAQK	2	KDTEEDSVTATLAAAQK2	2011.97	1317.16	884.279
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	KDTEEDSVTATLAAAQK	KDTEEDSVTATLAAAQK	3	KDTEEDSVTATLAAAQK3	18964.6	23966.1	19253.9
Q811U3	Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	1	KDTELLALQTK	KDTELLALQTK	3	KDTELLALQTK3	3917.22	3956.13	4198.08
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	KDTFLEK	KDTFLEK	2	KDTFLEK2	15732.4	4347.67	10887.3
Q5M860	Q5M860	Q5M860_RAT	Arhgdib	Rho GDP dissociation inhibitor beta	1	KDTFVLK	KDTFVLK	2	KDTFVLK2	13040.7	9000.95	9319.58
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	KDTHLQEADLQVEQNR	KDTHLQEADLQVEQNR	3	KDTHLQEADLQVEQNR3	16269.4	17659.5	16632.9
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	KDTHLQEADLQVEQNR	KDTHLQEADLQVEQNR	4	KDTHLQEADLQVEQNR4	76430.5	101332	117869
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	KDTYIENEK	KDTYIENEK	2	KDTYIENEK2	28729	29482.7	27261.1
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	KDTYIENEK	KDTYIENEK	3	KDTYIENEK3	44173.5	41864.5	68104.9
A0A0G2JZH0	A0A0G2JZH0	A0A0G2JZH0_RAT	Cab39	Calcium binding protein 39	1	KDVAQIFNNILR	KDVAQIFNNILR	2	KDVAQIFNNILR2	775.403	4067.6	3659.74
A0A0G2JZH0	A0A0G2JZH0	A0A0G2JZH0_RAT	Cab39	Calcium binding protein 39	1	KDVAQIFNNILR	KDVAQIFNNILR	3	KDVAQIFNNILR3	39954.4	34761.6	23575.8
Q6P6Q2	A0A0G2JVA8;A0A8I5ZMI8;Q6IG04;Q6P6Q2;A0A8I6G380;Q4FZU2	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	0	KDVDAAYMNK	KDVDAAYMNK	2	KDVDAAYMNK2	8487.54	9272.64	5953.68
Q6P6Q2	A0A0G2JVA8;A0A8I5ZMI8;Q6IG04;Q6P6Q2;A0A8I6G380;Q4FZU2	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	0	KDVDAAYMNK	KDVDAAYMNK	3	KDVDAAYMNK3	46562.3	43009.1	44256.5
Q6IG03	Q6IG03	K2C73_RAT	Krt73	Keratin, type II cytoskeletal 73	1	KDVDAAYMSK	KDVDAAYMSK	2	KDVDAAYMSK2	359347	302854	301819
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	KDVDDDDDGDER	KDVDDDDDGDER	2	KDVDDDDDGDER2			5053.67
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	KDVEDNCSLMYLNEATLLHNVK	KDVEDNC(UniMod:4)SLMYLNEATLLHNVK	3	KDVEDNC(UniMod:4)SLMYLNEATLLHNVK3	5162.44	4617.43	1426.98
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	KDVEDNCSLMYLNEATLLHNVK	KDVEDNC(UniMod:4)SLMYLNEATLLHNVK	4	KDVEDNC(UniMod:4)SLMYLNEATLLHNVK4	5805.92	1987.39	5274.55
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	KDVEFLAQLK	KDVEFLAQLK	2	KDVEFLAQLK2	10321.1	15703.1	16274.9
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	KDVEFLAQLK	KDVEFLAQLK	3	KDVEFLAQLK3	153012	119539	181747
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	KDVETLQQTIQEK	KDVETLQQTIQEK	3	KDVETLQQTIQEK3	12584.8	18117.5	13806.2
Q5RJY4	Q5RJY4	DRS7B_RAT	Dhrs7b	Dehydrogenase/reductase SDR family member 7B	1	KDVLLTDFLPTMAVYIR	KDVLLTDFLPTMAVYIR	3	KDVLLTDFLPTMAVYIR3	3446.8	1682.41	
A0A8I5Y661	A0A8I5Y661	A0A8I5Y661_RAT	Fam177a1	Family with sequence similarity 177, member A1	1	KDVLPTVDPTK	KDVLPTVDPTK	3	KDVLPTVDPTK3	3291.75	2775.51	
E9PU02	E9PU02	E9PU02_RAT	Trappc9	Trafficking protein particle complex subunit 9	1	KDVTQSLENYTAK	KDVTQSLENYTAK	3	KDVTQSLENYTAK3	7523.52	8517.09	4858.43
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	KDVVELTDDTFDK	KDVVELTDDTFDK	2	KDVVELTDDTFDK2	187012	229931	177470
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	KDVVELTDDTFDK	KDVVELTDDTFDK	3	KDVVELTDDTFDK3	1.08116e+06	1.30635e+06	1.36944e+06
P05696	P68403;P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	0	KDVVIQDDDVECTMVEK	KDVVIQDDDVEC(UniMod:4)TMVEK	3	KDVVIQDDDVEC(UniMod:4)TMVEK3	196555	208498	214985
P05696	P68403;P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	0	KDVVIQDDDVECTMVEKR	KDVVIQDDDVEC(UniMod:4)TMVEKR	3	KDVVIQDDDVEC(UniMod:4)TMVEKR3	3729.49	6601.72	4309.03
P05696	P68403;P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	0	KDVVIQDDDVECTMVEKR	KDVVIQDDDVEC(UniMod:4)TMVEKR	4	KDVVIQDDDVEC(UniMod:4)TMVEKR4	13317.9	15789.7	13967.3
P09215	P09215	KPCD_RAT	Prkcd	Protein kinase C delta type	1	KDVVLIDDDVECTMVEK	KDVVLIDDDVEC(UniMod:4)TMVEK	3	KDVVLIDDDVEC(UniMod:4)TMVEK3	6059.59		4984.56
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	KDVVLMDDDVECTMVEK	KDVVLMDDDVEC(UniMod:4)TMVEK	3	KDVVLMDDDVEC(UniMod:4)TMVEK3	10601.9	8138.58	11348.3
Q2LC84	Q2LC84	NUMB_RAT	Numb	Protein numb homolog	1	KDVYVPEASRPHQWQTDEEGVR	KDVYVPEASRPHQWQTDEEGVR	4	KDVYVPEASRPHQWQTDEEGVR4	11565.5	14563.5	13647.6
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	KDWDDDQND	KDWDDDQND	2	KDWDDDQND2	38204.9	30580	21977.7
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	KDWLFAPHYR	KDWLFAPHYR	3	KDWLFAPHYR3	27282.3	28174.2	28093
Q4V7C7	Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	1	KDYEEIGPSICR	KDYEEIGPSIC(UniMod:4)R	2	KDYEEIGPSIC(UniMod:4)R2	49493.2	48720.3	38075.7
Q4V7C7	Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	1	KDYEEIGPSICR	KDYEEIGPSIC(UniMod:4)R	3	KDYEEIGPSIC(UniMod:4)R3	478195	373954	440405
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	KDYITAK	KDYITAK	2	KDYITAK2	11845.9	9090.3	8776.12
Q4G063	Q4G063	CREL2_RAT	Creld2	Protein disulfide isomerase Creld2	1	KDYPNLFEWFCVR	KDYPNLFEWFC(UniMod:4)VR	3	KDYPNLFEWFC(UniMod:4)VR3	9888.11	12691.1	9713.48
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	KDYWDYFCACLAK	KDYWDYFC(UniMod:4)AC(UniMod:4)LAK	3	KDYWDYFC(UniMod:4)AC(UniMod:4)LAK3	7012.47	10649	3326.15
Q6AXU3	A0A8I6ALQ1;Q6AXU3;A0A8I6G4U4	I20L2_RAT	Isg20l2	Interferon-stimulated 20 kDa exonuclease-like 2	0	KEAAASK	KEAAASK	1	KEAAASK1	571.588		3475.9
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	KEAAENSLVAYK	KEAAENSLVAYK	2	KEAAENSLVAYK2	3755.8	5680.51	4840.14
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	KEAAENSLVAYK	KEAAENSLVAYK	3	KEAAENSLVAYK3	79582.6	77690.1	70931.6
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	KEAAILSEWLSTTEAELVQK	KEAAILSEWLSTTEAELVQK	3	KEAAILSEWLSTTEAELVQK3	46769.5	44352.9	82830
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	KEAASLMK	KEAASLMK	2	KEAASLMK2	384175	405230	348893
Q62871	Q62871	DC1I2_RAT	Dync1i2	Cytoplasmic dynein 1 intermediate chain 2	1	KEAAVSVQEESDLEK	KEAAVSVQEESDLEK	3	KEAAVSVQEESDLEK3	8619.98	14551.5	11548.9
Q62871	Q62871	DC1I2_RAT	Dync1i2	Cytoplasmic dynein 1 intermediate chain 2	1	KEAAVSVQEESDLEKK	KEAAVSVQEESDLEKK	3	KEAAVSVQEESDLEKK3	11498.9	8188.68	4257.48
Q62871	Q62871	DC1I2_RAT	Dync1i2	Cytoplasmic dynein 1 intermediate chain 2	1	KEAAVSVQEESDLEKK	KEAAVSVQEESDLEKK	4	KEAAVSVQEESDLEKK4	5568.69	5336.77	6555.8
P83953	P83953	IMA5_RAT	Kpna1	Importin subunit alpha-5	1	KEAAWAITNATSGGSAEQIK	KEAAWAITNATSGGSAEQIK	3	KEAAWAITNATSGGSAEQIK3	4701.94	6652.97	7166.25
A0A0G2JZS1	A0A0G2JZS1	A0A0G2JZS1_RAT	Kpna6	Importin subunit alpha	1	KEAAWAITNATSGGTPEQIR	KEAAWAITNATSGGTPEQIR	3	KEAAWAITNATSGGTPEQIR3	8875.52	8265.6	
P83953	Q56R16;P83953;A0A0G2JZS1	IMA5_RAT	Kpna1	Importin subunit alpha-5	0	KEACWTISNITAGNR	KEAC(UniMod:4)WTISNITAGNR	2	KEAC(UniMod:4)WTISNITAGNR2	2396.38	2242.22	1148.36
P83953	Q56R16;P83953;A0A0G2JZS1	IMA5_RAT	Kpna1	Importin subunit alpha-5	0	KEACWTISNITAGNR	KEAC(UniMod:4)WTISNITAGNR	3	KEAC(UniMod:4)WTISNITAGNR3	34323.8	48597.5	36544.5
D3ZCH1	D3ZCH1	D3ZCH1_RAT	Ankrd12	Ankyrin repeat domain 12	1	KEAEGEK	KEAEGEK	1	KEAEGEK1			6795.16
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	KEAESSPFVER	KEAESSPFVER	2	KEAESSPFVER2	64283.1	75980.5	51591.4
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	KEAESSPFVER	KEAESSPFVER	3	KEAESSPFVER3	722387	912222	828565
P30009	P30009	MARCS_RAT	Marcks	Myristoylated alanine-rich C-kinase substrate	1	KEAGEGAEAEGATADGAK	KEAGEGAEAEGATADGAK	2	KEAGEGAEAEGATADGAK2		21357.7	2762.74
P30009	P30009	MARCS_RAT	Marcks	Myristoylated alanine-rich C-kinase substrate	1	KEAGEGAEAEGATADGAK	KEAGEGAEAEGATADGAK	3	KEAGEGAEAEGATADGAK3	5782.53		11227.9
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	KEAGELKPEEEITVGPVQK	KEAGELKPEEEITVGPVQK	3	KEAGELKPEEEITVGPVQK3	22060.3	26519.6	23565.5
Q6AXS5	Q6AXS5	SERB1_RAT	Serbp1	SERPINE1 mRNA-binding protein 1	1	KEAGGGGVGGPGAK	KEAGGGGVGGPGAK	2	KEAGGGGVGGPGAK2			6569.22
Q6AXS5	Q6AXS5	SERB1_RAT	Serbp1	SERPINE1 mRNA-binding protein 1	1	KEAGGGGVGGPGAK	KEAGGGGVGGPGAK	3	KEAGGGGVGGPGAK3			22062
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	KEAKPEPMEEDLPENK	KEAKPEPMEEDLPENK	3	KEAKPEPMEEDLPENK3	5155.23	8027.75	5612.69
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	KEALEAVEGLVR	KEALEAVEGLVR	2	KEALEAVEGLVR2	6055.09	6187.62	5961.96
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	KEALEAVEGLVR	KEALEAVEGLVR	3	KEALEAVEGLVR3	72672.8	59602.8	70011.7
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	KEALTFDQANPTQILGK	KEALTFDQANPTQILGK	3	KEALTFDQANPTQILGK3	35823.6	35557	36602.3
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	KEAQLDEEGQFLVR	KEAQLDEEGQFLVR	2	KEAQLDEEGQFLVR2	1385.71	709.334	
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	KEAQLDEEGQFLVR	KEAQLDEEGQFLVR	3	KEAQLDEEGQFLVR3	40448.9	45441.4	36906.6
B2GUZ5	B2GUZ5	CAZA1_RAT	Capza1	F-actin-capping protein subunit alpha-1	1	KEASDPQPEDVDGGLK	KEASDPQPEDVDGGLK	3	KEASDPQPEDVDGGLK3	37538.3	24661.8	39855.8
Q3T1K5	Q3T1K5	CAZA2_RAT	Capza2	F-actin-capping protein subunit alpha-2	1	KEATDPRPYEAENAIESWR	KEATDPRPYEAENAIESWR	3	KEATDPRPYEAENAIESWR3	13627.6		8552.21
E9PTA5	E9PTA5	E9PTA5_RAT	Pign	GPI ethanolamine phosphate transferase 1	1	KEATLPFLFTPFK	KEATLPFLFTPFK	3	KEATLPFLFTPFK3	13667.6	15524.6	16728.7
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	KEAVGDLLDAFK	KEAVGDLLDAFK	2	KEAVGDLLDAFK2	8398.08	4489.1	13402.5
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	KEAVGDLLDAFK	KEAVGDLLDAFK	3	KEAVGDLLDAFK3	23425.2	59797.9	18535.7
A0A8I6AW91	A0A8I6AW91	A0A8I6AW91_RAT	Srp72	Signal recognition particle subunit SRP72	1	KEAVSDLEQLWK	KEAVSDLEQLWK	3	KEAVSDLEQLWK3	4145.74		3204.38
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	KECDLETELK	KEC(UniMod:4)DLETELK	3	KEC(UniMod:4)DLETELK3	4475.85	4367.38	4388.31
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	KECEGEEINIQSAVLTEEGQSPR	KEC(UniMod:4)EGEEINIQSAVLTEEGQSPR	3	KEC(UniMod:4)EGEEINIQSAVLTEEGQSPR3	12596.2	14984.8	7481.56
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	KECELINSVPACVPWSPYLFQPNDR	KEC(UniMod:4)ELINSVPAC(UniMod:4)VPWSPYLFQPNDR	4	KEC(UniMod:4)ELINSVPAC(UniMod:4)VPWSPYLFQPNDR4	7763.53	9398.69	9221.66
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	KECGILADPEGPFR	KEC(UniMod:4)GILADPEGPFR	2	KEC(UniMod:4)GILADPEGPFR2	197833	186598	175993
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	KECGILADPEGPFR	KEC(UniMod:4)GILADPEGPFR	3	KEC(UniMod:4)GILADPEGPFR3	1.22775e+06	1.17541e+06	1.19289e+06
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	KECGILADPEGPFRECHK	KEC(UniMod:4)GILADPEGPFREC(UniMod:4)HK	3	KEC(UniMod:4)GILADPEGPFREC(UniMod:4)HK3	16398.6	15224.9	17564.7
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	KECGILADPEGPFRECHK	KEC(UniMod:4)GILADPEGPFREC(UniMod:4)HK	4	KEC(UniMod:4)GILADPEGPFREC(UniMod:4)HK4	63698.1	100218	84138.4
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	KECPFVIKPK	KEC(UniMod:4)PFVIKPK	3	KEC(UniMod:4)PFVIKPK3	7266.49	5866.48	10526.3
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	KECPVPNVQNSPIPTK	KEC(UniMod:4)PVPNVQNSPIPTK	3	KEC(UniMod:4)PVPNVQNSPIPTK3	36744	44075.2	36811.3
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	KECPVPNVQNSPIPTKLPEPVK	KEC(UniMod:4)PVPNVQNSPIPTKLPEPVK	4	KEC(UniMod:4)PVPNVQNSPIPTKLPEPVK4	8213.31	18956.8	7995.57
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	KECTWAISSTPGHR	KEC(UniMod:4)TWAISSTPGHR	3	KEC(UniMod:4)TWAISSTPGHR3	33603.9	22576.9	20535.1
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	KECTWAISSTPGHR	KEC(UniMod:4)TWAISSTPGHR	4	KEC(UniMod:4)TWAISSTPGHR4	6779.64	10450.1	17289.9
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	KEDAENLAAAQR	KEDAENLAAAQR	2	KEDAENLAAAQR2	2316.11	827.73	2672.91
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	KEDAENLAAAQR	KEDAENLAAAQR	3	KEDAENLAAAQR3	73994.8	75242.8	64168.4
Q63190	Q63190	EMD_RAT	Emd	Emerin	1	KEDALLYQSK	KEDALLYQSK	2	KEDALLYQSK2	4724.05	5755.91	
Q63190	Q63190	EMD_RAT	Emd	Emerin	1	KEDALLYQSK	KEDALLYQSK	3	KEDALLYQSK3	36283.9	27975.1	41067.6
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	KEDEGWYWCGVK	KEDEGWYWC(UniMod:4)GVK	2	KEDEGWYWC(UniMod:4)GVK2	16359.9	15361.3	17119
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	KEDEGWYWCGVK	KEDEGWYWC(UniMod:4)GVK	3	KEDEGWYWC(UniMod:4)GVK3	188790	199853	201989
Q5BK07	Q5BK07	CCD43_RAT	Ccdc43	Coiled-coil domain-containing protein 43	1	KEDEVQAITTLIEK	KEDEVQAITTLIEK	3	KEDEVQAITTLIEK3	15899.8	19545.1	21396.4
D4A0J7	D4A0J7	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	1	KEDFYTVETITSGSSCK	KEDFYTVETITSGSSC(UniMod:4)K	2	KEDFYTVETITSGSSC(UniMod:4)K2	7073.51	5369.05	2114.98
D4A0J7	D4A0J7	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	1	KEDFYTVETITSGSSCK	KEDFYTVETITSGSSC(UniMod:4)K	3	KEDFYTVETITSGSSC(UniMod:4)K3	145772	166063	183048
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	KEDGDTVCSGPGMSDPR	KEDGDTVC(UniMod:4)SGPGMSDPR	3	KEDGDTVC(UniMod:4)SGPGMSDPR3	14177.5	26228.8	20682.9
O08775	O08775	VGFR2_RAT	Kdr	Vascular endothelial growth factor receptor 2	1	KEDGGLYTCQACNVLGCAR	KEDGGLYTC(UniMod:4)QAC(UniMod:4)NVLGC(UniMod:4)AR	3	KEDGGLYTC(UniMod:4)QAC(UniMod:4)NVLGC(UniMod:4)AR3	8339.47	12755.4	15417
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	KEDGSEVGVGGAQVTGSNTR	KEDGSEVGVGGAQVTGSNTR	3	KEDGSEVGVGGAQVTGSNTR3	12412.4	14619.4	6253.52
F1LPV0	F1LPV0	F1LPV0_RAT	Nars1	asparagine--tRNA ligase	1	KEDGTFYEFGDDIPEAPER	KEDGTFYEFGDDIPEAPER	3	KEDGTFYEFGDDIPEAPER3	56939.2	56980.9	68941.8
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	KEDIAMWEVNEAFSVVVLANIK	KEDIAMWEVNEAFSVVVLANIK	3	KEDIAMWEVNEAFSVVVLANIK3	2726.97	3527.24	1742.63
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	KEDIYAVEIVGGATR	KEDIYAVEIVGGATR	2	KEDIYAVEIVGGATR2	24550.9	26003.5	25730.3
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	KEDIYAVEIVGGATR	KEDIYAVEIVGGATR	3	KEDIYAVEIVGGATR3	151892	143673	126805
A0A8I5YC01	A0A8I5YC01	A0A8I5YC01_RAT	Gimap1	GTPase, IMAP family member 1	1	KEDLAGDSLQDYVR	KEDLAGDSLQDYVR	3	KEDLAGDSLQDYVR3	8727.6	8339.63	5003.84
A0A8I6A9K9	A0A8I6A9K9;A0A8I6GAP5	A0A8I6A9K9_RAT	Hypk	Huntingtin interacting protein K	0	KEDLELIMTEMEISR	KEDLELIMTEMEISR	3	KEDLELIMTEMEISR3	21039.5	20988	17884.5
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	KEDLPVEAHSIIK	KEDLPVEAHSIIK	3	KEDLPVEAHSIIK3	3742.9	1599.07	2703.18
P45592	M0RC65;P45592	COF1_RAT	Cfl1	Cofilin-1	0	KEDLVFIFWAPESAPLK	KEDLVFIFWAPESAPLK	3	KEDLVFIFWAPESAPLK3	692912	355911	688162
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	KEDLYLKPIQR	KEDLYLKPIQR	3	KEDLYLKPIQR3	62936.2	66108.1	56488.8
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	KEDMMFHK	KEDMMFHK	2	KEDMMFHK2	5958.84	4405.94	3660.88
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	KEDSCQLNYSEGPCLGMQQK	KEDSC(UniMod:4)QLNYSEGPC(UniMod:4)LGMQQK	3	KEDSC(UniMod:4)QLNYSEGPC(UniMod:4)LGMQQK3	19890.5	21209.7	25398.6
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	KEDSCQLNYSEGPCLGMQQK	KEDSC(UniMod:4)QLNYSEGPC(UniMod:4)LGMQQK	4	KEDSC(UniMod:4)QLNYSEGPC(UniMod:4)LGMQQK4	114349	103577	116456
F1LN92	F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	1	KEDSHWWSR	KEDSHWWSR	3	KEDSHWWSR3	13859.5	13158	11308.7
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	KEDVGTVVGIDLGTTYSCVGVFK	KEDVGTVVGIDLGTTYSC(UniMod:4)VGVFK	3	KEDVGTVVGIDLGTTYSC(UniMod:4)VGVFK3	212505	277765	251602
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	KEDVNFQDNEK	KEDVNFQDNEK	3	KEDVNFQDNEK3	5915	4779.29	6638.32
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	KEDVYPVGTVLR	KEDVYPVGTVLR	2	KEDVYPVGTVLR2	3.04157e+06	3.09701e+06	2.68996e+06
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	KEDVYPVGTVLR	KEDVYPVGTVLR	3	KEDVYPVGTVLR3	5.5126e+07	6.17632e+07	5.95903e+07
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	KEEALHSIISNTEAVQGSVSK	KEEALHSIISNTEAVQGSVSK	3	KEEALHSIISNTEAVQGSVSK3	6417.69	4216.65	5454.73
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	KEEALHSIISNTEAVQGSVSK	KEEALHSIISNTEAVQGSVSK	4	KEEALHSIISNTEAVQGSVSK4	18909.9	16724.2	9948.69
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	KEEAYELVR	KEEAYELVR	2	KEEAYELVR2	10038.7	9136.55	5038.57
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	KEECPAVR	KEEC(UniMod:4)PAVR	2	KEEC(UniMod:4)PAVR2			164153
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	KEEDCKEYVAAVLR	KEEDC(UniMod:4)KEYVAAVLR	3	KEEDC(UniMod:4)KEYVAAVLR3	4807.98	4252.28	1780.29
Q07647	Q07647	GTR3_RAT	Slc2a3	Solute carrier family 2, facilitated glucose transporter member 3	1	KEEDQATEILQR	KEEDQATEILQR	2	KEEDQATEILQR2	64187.9	54526.4	66305.1
Q07647	Q07647	GTR3_RAT	Slc2a3	Solute carrier family 2, facilitated glucose transporter member 3	1	KEEDQATEILQR	KEEDQATEILQR	3	KEEDQATEILQR3	896521	1.01037e+06	1.06655e+06
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	KEEDRPPLR	KEEDRPPLR	3	KEEDRPPLR3	139333		121300
Q5PQK5	Q5PQK5	Q5PQK5_RAT	Rdx	Radixin	1	KEEEATEWQHK	KEEEATEWQHK	3	KEEEATEWQHK3		3860.99	
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	KEEECESYTVR	KEEEC(UniMod:4)ESYTVR	3	KEEEC(UniMod:4)ESYTVR3	46557.4	33281.2	48087.7
A0A8I5ZP83	D4A9Z8;A0A8I5ZP83	A0A8I5ZP83_RAT	Chmp4b	Charged multivesicular body protein 4B	0	KEEEDDDMKELENWAGSM	KEEEDDDMKELENWAGSM	3	KEEEDDDMKELENWAGSM3	15435.4	17620.7	18561.1
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	KEEEEEEEEYDEGSNLK	KEEEEEEEEYDEGSNLK	3	KEEEEEEEEYDEGSNLK3	98246.2	108555	111239
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	KEEEEEEEEYDEGSNLKR	KEEEEEEEEYDEGSNLKR	3	KEEEEEEEEYDEGSNLKR3	4242.89		6930.27
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	KEEEEEEEEYDEGSNLKR	KEEEEEEEEYDEGSNLKR	4	KEEEEEEEEYDEGSNLKR4	15798.2	16586.8	23485.4
Q9JLH7	Q9JLH7	CK5P3_RAT	Cdk5rap3	CDK5 regulatory subunit-associated protein 3	1	KEEEGQAGAAEMR	KEEEGQAGAAEMR	2	KEEEGQAGAAEMR2	1047.11	3370.64	4320.23
Q9JLH7	Q9JLH7	CK5P3_RAT	Cdk5rap3	CDK5 regulatory subunit-associated protein 3	1	KEEEGQAGAAEMR	KEEEGQAGAAEMR	3	KEEEGQAGAAEMR3	25405.2	19334.7	23142
Q4QQV3	Q4QQV3	F162A_RAT	Fam162a	Protein FAM162A	1	KEEEIPETISFEMLDAAK	KEEEIPETISFEMLDAAK	3	KEEEIPETISFEMLDAAK3	6961.91	14278.8	10543.4
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	KEEEISNLK	KEEEISNLK	2	KEEEISNLK2	4939.77	9453.75	2201.88
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KEEELQAALAR	KEEELQAALAR	2	KEEELQAALAR2	422139	482969	428613
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KEEELQAALAR	KEEELQAALAR	3	KEEELQAALAR3	3.34147e+06	4.05304e+06	3.58023e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KEEELQAALARVEEEAAQK	KEEELQAALARVEEEAAQK	4	KEEELQAALARVEEEAAQK4	3975.2		2412.42
P05712	P05712	RAB2A_RAT	Rab2a	Ras-related protein Rab-2A	1	KEEGEAFAR	KEEGEAFAR	2	KEEGEAFAR2	90689.8	73194.3	72164.8
Q07205	Q07205;A0A8I6AVQ3	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	KEEGIIDSSDK	KEEGIIDSSDK	3	KEEGIIDSSDK3	27972	31833.4	24544.1
Q07205	Q07205;A0A8I6AVQ3	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	KEEGIIDSSDKDIVAEAER	KEEGIIDSSDKDIVAEAER	3	KEEGIIDSSDKDIVAEAER3	8239.36	5239.48	13380.4
Q07205	Q07205;A0A8I6AVQ3	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	KEEGIIDSSDKDIVAEAER	KEEGIIDSSDKDIVAEAER	4	KEEGIIDSSDKDIVAEAER4	67142.1	77418.3	73853.8
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	KEEIIAPCK	KEEIIAPC(UniMod:4)K	2	KEEIIAPC(UniMod:4)K2	15914.4	19086.6	14667.7
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	KEEITESLTEVTDIGFGNR	KEEITESLTEVTDIGFGNR	3	KEEITESLTEVTDIGFGNR3	46465.3	44481.5	51679.4
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	KEELLNAMVAK	KEELLNAMVAK	2	KEELLNAMVAK2	19323.6	20858.6	8774.53
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	KEELLNAMVAK	KEELLNAMVAK	3	KEELLNAMVAK3	89022.5	74920.1	72387.3
Q7M0E3	D4A315;Q7M0E3	DEST_RAT	Dstn	Destrin	0	KEELMFFLWAPEQAPLK	KEELMFFLWAPEQAPLK	3	KEELMFFLWAPEQAPLK3	154821	233055	75815.1
Q7M0E3	D4A315;Q7M0E3	DEST_RAT	Dstn	Destrin	0	KEELMFFLWAPEQAPLK	KEELMFFLWAPEQAPLK	4	KEELMFFLWAPEQAPLK4	3268.52	3414.82	3547.59
Q6P3V8	A0A8I6GF11;Q6P3V8	Q6P3V8_RAT	Eif4a1	ATP-dependent RNA helicase	0	KEELTLEGIR	KEELTLEGIR	3	KEELTLEGIR3	56504.8	42691.3	44120.5
Q6P7P5	Q6P7P5	5MP2_RAT	Bzw1	eIF5-mimic protein 2	1	KEELVAEQAIK	KEELVAEQAIK	3	KEELVAEQAIK3	166512	175838	177872
Q9WTT7	Q9WTT7	5MP1_RAT	Bzw2	eIF5-mimic protein 1	1	KEELVAEQALK	KEELVAEQALK	2	KEELVAEQALK2	11962.8	11269.1	8309.02
Q9WTT7	Q9WTT7	5MP1_RAT	Bzw2	eIF5-mimic protein 1	1	KEELVAEQALK	KEELVAEQALK	3	KEELVAEQALK3	166512	175838	177872
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	KEELYQLQGQLER	KEELYQLQGQLER	3	KEELYQLQGQLER3	25744.7	24466	29363.4
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	KEENLAEWYSQVITK	KEENLAEWYSQVITK	3	KEENLAEWYSQVITK3	30466.4	35355.2	40611.5
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	KEEPPSLR	KEEPPSLR	2	KEEPPSLR2	35189.3	24629.1	19220.4
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	KEEPPSLRPAPPPISGGGYR	KEEPPSLRPAPPPISGGGYR	3	KEEPPSLRPAPPPISGGGYR3	2.13375e+06	1.87289e+06	1.74725e+06
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	KEEPPSLRPAPPPISGGGYR	KEEPPSLRPAPPPISGGGYR	4	KEEPPSLRPAPPPISGGGYR4	1.55976e+07	1.43128e+07	1.73163e+07
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	KEEQEFVQK	KEEQEFVQK	2	KEEQEFVQK2	30770.2	8930.99	27108.3
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	KEEQEFVQK	KEEQEFVQK	3	KEEQEFVQK3	28482.6	19770.4	56331.2
A0A8I6G6W8	A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	KEEQVVQVWSK	KEEQVVQVWSK	3	KEEQVVQVWSK3	8825.49	7238.61	9014.09
P02401	P02401	RLA2_RAT	Rplp2	Large ribosomal subunit protein P2	1	KEESEESDDDMGFGLFD	KEESEESDDDMGFGLFD	2	KEESEESDDDMGFGLFD2	3754.67	4212.15	10035.7
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	KEESHSNDQSPQIR	KEESHSNDQSPQIR	2	KEESHSNDQSPQIR2			1726.83
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	KEESHSNDQSPQIR	KEESHSNDQSPQIR	4	KEESHSNDQSPQIR4			10496.4
Q4QR80	Q4QR80	RT25_RAT	Mrps25	Small ribosomal subunit protein mS25	1	KEETLREEELEK	KEETLREEELEK	3	KEETLREEELEK3	9520.84	9740.33	
Q7TP42	Q7TP42	Q7TP42_RAT	Sec62	Translocation protein SEC62	1	KEETPGTPK	KEETPGTPK	2	KEETPGTPK2			23829.1
Q6AXS5	Q6AXS5	SERB1_RAT	Serbp1	SERPINE1 mRNA-binding protein 1	1	KEETQPPVALK	KEETQPPVALK	3	KEETQPPVALK3	51580.8	32778.1	45736.9
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	KEFELSK	KEFELSK	2	KEFELSK2	14983.5	14455.7	11213.8
Q29RW1	Q29RW1	MYH4_RAT	Myh4	Myosin-4	1	KEFEMSNLQSK	KEFEMSNLQSK	3	KEFEMSNLQSK3	5208.6	6256.97	11329.3
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	KEFGETAEGWK	KEFGETAEGWK	3	KEFGETAEGWK3	5168.61	3936.57	9844.53
Q5RJR2	Q5RJR2;A0A8I6GGS8	TWF1_RAT	Twf1	Twinfilin-1	0	KEFGGGHIKDEVFGTVK	KEFGGGHIKDEVFGTVK	3	KEFGGGHIKDEVFGTVK3	9282.74	10184.8	11687
Q5RJR2	Q5RJR2;A0A8I6GGS8	TWF1_RAT	Twf1	Twinfilin-1	0	KEFGGGHIKDEVFGTVK	KEFGGGHIKDEVFGTVK	4	KEFGGGHIKDEVFGTVK4	27114.9	25076.2	37311
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	KEFGPVVIDYGK	KEFGPVVIDYGK	2	KEFGPVVIDYGK2	9787.31	11280.3	16147.6
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	KEFGPVVIDYGK	KEFGPVVIDYGK	3	KEFGPVVIDYGK3	153649	208641	178517
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	KEFLHAQEEVK	KEFLHAQEEVK	3	KEFLHAQEEVK3	13115.1	8528	15883.8
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	KEFLHAQEEVKR	KEFLHAQEEVKR	3	KEFLHAQEEVKR3	13955.6	17652.3	11686.8
D3ZUQ1	D3ZUQ1	D3ZUQ1_RAT	Lipo1	Lipase	1	KEFLPTVVFSEYSK	KEFLPTVVFSEYSK	2	KEFLPTVVFSEYSK2	121512	123474	123122
D3ZUQ1	D3ZUQ1	D3ZUQ1_RAT	Lipo1	Lipase	1	KEFLPTVVFSEYSK	KEFLPTVVFSEYSK	3	KEFLPTVVFSEYSK3	457381	455371	466511
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	KEFMSQGNK	KEFMSQGNK	2	KEFMSQGNK2	34759.7	19541.3	19926.2
D3ZZC1	D3ZZC1	D3ZZC1_RAT	Txndc5	protein disulfide-isomerase	1	KEFPGLADVTIAEVDCTAER	KEFPGLADVTIAEVDC(UniMod:4)TAER	3	KEFPGLADVTIAEVDC(UniMod:4)TAER3	29764.4	25856.8	18154.8
O08773	O08773	RGS14_RAT	Rgs14	Regulator of G-protein signaling 14	1	KEFSAENVTFWQACER	KEFSAENVTFWQAC(UniMod:4)ER	3	KEFSAENVTFWQAC(UniMod:4)ER3	3948.68	4521.57	3726.32
P49806	P49806	RGS10_RAT	Rgs10	Regulator of G-protein signaling 10	1	KEFSEENVLFWLACEDFKK	KEFSEENVLFWLAC(UniMod:4)EDFKK	3	KEFSEENVLFWLAC(UniMod:4)EDFKK3	7809.42	18521.8	19712.9
P49806	P49806	RGS10_RAT	Rgs10	Regulator of G-protein signaling 10	1	KEFSEENVLFWLACEDFKK	KEFSEENVLFWLAC(UniMod:4)EDFKK	4	KEFSEENVLFWLAC(UniMod:4)EDFKK4	5069.72	12755.6	5782.74
Q4V7C7	Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	1	KEFSIDVGYER	KEFSIDVGYER	2	KEFSIDVGYER2	23224.6	18042.8	20067.5
Q4V7C7	Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	1	KEFSIDVGYER	KEFSIDVGYER	3	KEFSIDVGYER3	236659	214258	220551
Q9EPH8	B5DF80;Q9EPH8	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	0	KEFSPFGTITSAK	KEFSPFGTITSAK	3	KEFSPFGTITSAK3	22059.3	15915.1	21773.7
P11507	Q64578;P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	0	KEFTLEFSR	KEFTLEFSR	2	KEFTLEFSR2	90441.4	104747	76988.7
P11507	Q64578;P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	0	KEFTLEFSR	KEFTLEFSR	3	KEFTLEFSR3	212270	195340	192842
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	KEGALDDTR	KEGALDDTR	2	KEGALDDTR2	1.8924e+06		1.39559e+06
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	KEGALDDTRDSEMK	KEGALDDTRDSEMK	2	KEGALDDTRDSEMK2	203072	170817	188042
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	KEGALDDTRDSEMK	KEGALDDTRDSEMK	3	KEGALDDTRDSEMK3	15879.9	5.18728e+06	16681.4
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	KEGALDDTRDSEMK	KEGALDDTRDSEMK	4	KEGALDDTRDSEMK4	19176.2	23792.3	31519.3
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	KEGDLLAAQAR	KEGDLLAAQAR	2	KEGDLLAAQAR2	1999.66		1987.69
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	KEGDLLAAQAR	KEGDLLAAQAR	3	KEGDLLAAQAR3	54513.2	57056.7	65633.3
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	KEGDRLDYGDVIPMAEAAGIIR	KEGDRLDYGDVIPMAEAAGIIR	4	KEGDRLDYGDVIPMAEAAGIIR4	5814.6	9004.54	5053.07
P19511	P19511	AT5F1_RAT	Atp5pb	ATP synthase F(0) complex subunit B1, mitochondrial	1	KEGEHMINWVEK	KEGEHMINWVEK	3	KEGEHMINWVEK3	15325.8	14802.8	18208.3
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	KEGGGGGASAAADGGAGAAASR	KEGGGGGASAAADGGAGAAASR	3	KEGGGGGASAAADGGAGAAASR3			410.277
Q3B7D0	Q3B7D0	HEM6_RAT	Cpox	Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial	1	KEGGGGITCVLQDGR	KEGGGGITC(UniMod:4)VLQDGR	3	KEGGGGITC(UniMod:4)VLQDGR3	3202.54	818.853	2669.96
P35704	P35704	PRDX2_RAT	Prdx2	Peroxiredoxin-2	1	KEGGLGPLNIPLLADVTK	KEGGLGPLNIPLLADVTK	2	KEGGLGPLNIPLLADVTK2		4904.25	
P35704	P35704	PRDX2_RAT	Prdx2	Peroxiredoxin-2	1	KEGGLGPLNIPLLADVTK	KEGGLGPLNIPLLADVTK	3	KEGGLGPLNIPLLADVTK3	44806.1	35702.8	24351.2
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	KEGICAIGGTSEQSSVGTQHSYSEEEK	KEGIC(UniMod:4)AIGGTSEQSSVGTQHSYSEEEK	4	KEGIC(UniMod:4)AIGGTSEQSSVGTQHSYSEEEK4	9811.72	7155.08	9604.66
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	KEGIMNPEVGMK	KEGIMNPEVGMK	3	KEGIMNPEVGMK3	10722.8	10629.7	11461.2
P01026	P01026	CO3_RAT	C3	Complement C3	1	KEGIPDAR	KEGIPDAR	2	KEGIPDAR2	1.23203e+06	1.10836e+06	999876
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	KEGLDEVAGIINEAK	KEGLDEVAGIINEAK	3	KEGLDEVAGIINEAK3	11833.7	10957	5859.68
Q99JD4	Q99JD4;F1LNQ9	CLAP2_RAT	Clasp2	CLIP-associating protein 2	0	KEGLLGLQNLLK	KEGLLGLQNLLK	3	KEGLLGLQNLLK3	5189.32	6160.97	3038.22
Q3B7T9	Q3B7T9	RFIP1_RAT	Rab11fip1	Rab11 family-interacting protein 1	1	KEGLSFLGGLR	KEGLSFLGGLR	3	KEGLSFLGGLR3	25862.7	21987.3	22858.4
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	KEGSDGPLATSK	KEGSDGPLATSK	3	KEGSDGPLATSK3		55854.6	
P00507	P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	1	KEGSSHNWQHITDQIGMFCFTGLKPEQVER	KEGSSHNWQHITDQIGMFC(UniMod:4)FTGLKPEQVER	4	KEGSSHNWQHITDQIGMFC(UniMod:4)FTGLKPEQVER4	11266	13891.3	10658.6
A0A8I6AHI1	A0A8I6AHI1	A0A8I6AHI1_RAT	Cd40	Tumor necrosis factor receptor superfamily member 5	1	KEGTAVSDTVCTCK	KEGTAVSDTVC(UniMod:4)TC(UniMod:4)K	3	KEGTAVSDTVC(UniMod:4)TC(UniMod:4)K3	4202.09	2921.93	8403.5
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	KEGTEDQDTFVSVIYCSGTDR	KEGTEDQDTFVSVIYC(UniMod:4)SGTDR	3	KEGTEDQDTFVSVIYC(UniMod:4)SGTDR3	9032.07	12802	4324.58
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	KEGTVTAGNASGMSDGAGVVIIASEDAVK	KEGTVTAGNASGMSDGAGVVIIASEDAVK	3	KEGTVTAGNASGMSDGAGVVIIASEDAVK3	4203.63	9650.62	5377.48
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	KEGTVTAGNASGMSDGAGVVIIASEDAVKK	KEGTVTAGNASGMSDGAGVVIIASEDAVKK	4	KEGTVTAGNASGMSDGAGVVIIASEDAVKK4	15866.5	15926.5	13591.6
P58751	P58751	RELN_RAT	Reln	Reelin	1	KEGVLLDYSK	KEGVLLDYSK	3	KEGVLLDYSK3	15722.3	14162.2	19991.4
P85515	P85515	ACTZ_RAT	Actr1a	Alpha-centractin	1	KEGYDFHSSSEFEIVK	KEGYDFHSSSEFEIVK	3	KEGYDFHSSSEFEIVK3			4156.82
P85515	P85515	ACTZ_RAT	Actr1a	Alpha-centractin	1	KEGYDFHSSSEFEIVK	KEGYDFHSSSEFEIVK	4	KEGYDFHSSSEFEIVK4	4552.29		4482.46
P58751	P58751	RELN_RAT	Reln	Reelin	1	KEHIALDTLSYSSYK	KEHIALDTLSYSSYK	2	KEHIALDTLSYSSYK2	4260.85	11331.3	5442.46
P58751	P58751	RELN_RAT	Reln	Reelin	1	KEHIALDTLSYSSYK	KEHIALDTLSYSSYK	3	KEHIALDTLSYSSYK3	168997	170415	166518
P58751	P58751	RELN_RAT	Reln	Reelin	1	KEHIALDTLSYSSYK	KEHIALDTLSYSSYK	4	KEHIALDTLSYSSYK4	107746	129415	112408
Q6IE52	Q6IE52	MUG2_RAT	Mug2	Murinoglobulin-2	1	KEHTFSSLLCASDAELSETLSLLLPPR	KEHTFSSLLC(UniMod:4)ASDAELSETLSLLLPPR	4	KEHTFSSLLC(UniMod:4)ASDAELSETLSLLLPPR4	4691.57	6011.85	11311.8
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	KEHTFSSLLCASDAELSETLSLLLPPTVVK	KEHTFSSLLC(UniMod:4)ASDAELSETLSLLLPPTVVK	4	KEHTFSSLLC(UniMod:4)ASDAELSETLSLLLPPTVVK4	1.94238e+06	247556	47800.8
Q62761	Q62761	KC1G1_RAT	Csnk1g1	Casein kinase I isoform gamma-1	1	KEHVIHIIDFGLAK	KEHVIHIIDFGLAK	3	KEHVIHIIDFGLAK3	1309.04	2187.38	
Q62761	Q62761	KC1G1_RAT	Csnk1g1	Casein kinase I isoform gamma-1	1	KEHVIHIIDFGLAK	KEHVIHIIDFGLAK	4	KEHVIHIIDFGLAK4	6992.89	17440	
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	KEHVNVVFIGHVDAGK	KEHVNVVFIGHVDAGK	3	KEHVNVVFIGHVDAGK3	5637.18	19980.6	8995.12
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	KEHVNVVFIGHVDAGK	KEHVNVVFIGHVDAGK	4	KEHVNVVFIGHVDAGK4	35377.9	29506.8	26576.6
Q568Z6	Q568Z6	IST1_RAT	Ist1	IST1 homolog	1	KEIADYLAAGKDER	KEIADYLAAGKDER	3	KEIADYLAAGKDER3	2205.53	1207.12	5495.26
Q568Z6	Q568Z6	IST1_RAT	Ist1	IST1 homolog	1	KEIADYLAAGKDER	KEIADYLAAGKDER	4	KEIADYLAAGKDER4	4334.24		2295.76
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	KEICNAYTELNDPVR	KEIC(UniMod:4)NAYTELNDPVR	2	KEIC(UniMod:4)NAYTELNDPVR2	3507.24		
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	KEICNAYTELNDPVR	KEIC(UniMod:4)NAYTELNDPVR	3	KEIC(UniMod:4)NAYTELNDPVR3	13997.2	11462.5	17975.6
O35094	O35094	TIM44_RAT	Timm44	Mitochondrial import inner membrane translocase subunit TIM44	1	KEIDESVLGHTGTYR	KEIDESVLGHTGTYR	3	KEIDESVLGHTGTYR3	8506.53	6243.27	8243.43
O35094	O35094	TIM44_RAT	Timm44	Mitochondrial import inner membrane translocase subunit TIM44	1	KEIDESVLGHTGTYR	KEIDESVLGHTGTYR	4	KEIDESVLGHTGTYR4	6978.54	8681.19	11384.9
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	KEIDIKK	KEIDIKK	2	KEIDIKK2			2568.18
P20788	P20788	UCRI_RAT	Uqcrfs1	Cytochrome b-c1 complex subunit Rieske, mitochondrial	1	KEIDQEAAVEVSQLR	KEIDQEAAVEVSQLR	2	KEIDQEAAVEVSQLR2	1076.99		
P20788	P20788	UCRI_RAT	Uqcrfs1	Cytochrome b-c1 complex subunit Rieske, mitochondrial	1	KEIDQEAAVEVSQLR	KEIDQEAAVEVSQLR	3	KEIDQEAAVEVSQLR3	24080.7	18327.5	37968.4
P20788	P20788	UCRI_RAT	Uqcrfs1	Cytochrome b-c1 complex subunit Rieske, mitochondrial	1	KEIDQEAAVEVSQLRDPQHDLER	KEIDQEAAVEVSQLRDPQHDLER	4	KEIDQEAAVEVSQLRDPQHDLER4	128331	116198	135642
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	KEIEDLYSR	KEIEDLYSR	2	KEIEDLYSR2	19078.8		5100.75
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	KEIEDLYSR	KEIEDLYSR	3	KEIEDLYSR3	27459.9	35600.3	25654.7
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	KEIEELQSQAQALSQEGK	KEIEELQSQAQALSQEGK	3	KEIEELQSQAQALSQEGK3	503653	585737	545312
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	KEIGDEN	KEIGDEN	1	KEIGDEN1			28852.8
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	KEIGDEN	KEIGDEN	2	KEIGDEN2			154677
A0A8I5ZPZ9	A0A8I5ZPZ9	A0A8I5ZPZ9_RAT	Ptpa	Serine/threonine-protein phosphatase 2A activator	1	KEIHTVPDMGK	KEIHTVPDMGK	3	KEIHTVPDMGK3	66514.5	59043.4	51153.2
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	KEIIEQMEMK	KEIIEQMEMK	2	KEIIEQMEMK2	2135.43	2772.36	2331.24
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	KEIIEQMEMK	KEIIEQMEMK	3	KEIIEQMEMK3	27603	19488.8	26951.8
P60123	P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	1	KEIIQDVTLHDLDVANAR	KEIIQDVTLHDLDVANAR	3	KEIIQDVTLHDLDVANAR3	4936.76		9435.78
P60123	P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	1	KEIIQDVTLHDLDVANAR	KEIIQDVTLHDLDVANAR	4	KEIIQDVTLHDLDVANAR4	6793.67	7697.76	8171.33
P54777	P54777	PEX6_RAT	Pex6	Peroxisomal ATPase PEX6	1	KEILETIQLPLEHPELLSLGLR	KEILETIQLPLEHPELLSLGLR	4	KEILETIQLPLEHPELLSLGLR4	4869.56		3073.09
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	KEIPSPEMETPAQK	KEIPSPEMETPAQK	2	KEIPSPEMETPAQK2	7226.29	12664.4	9825.97
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	KEIPSPEMETPAQK	KEIPSPEMETPAQK	3	KEIPSPEMETPAQK3	47000.1	61602.6	59267
A0A8I6AWI2	A0A8I6AWI2	A0A8I6AWI2_RAT	Dnai3	Dynein axonemal intermediate chain 3	1	KEIREEEK	KEIREEEK	2	KEIREEEK2			859621
Q5XI81	Q5XI81	FXR1_RAT	Fxr1	RNA-binding protein FXR1	1	KEISEGDEVEVYSR	KEISEGDEVEVYSR	3	KEISEGDEVEVYSR3	21400	17267	18932.1
Q6AY86	Q6AY86	VP26A_RAT	Vps26a	Vacuolar protein sorting-associated protein 26A	1	KEITGIGPSTTTETETIAK	KEITGIGPSTTTETETIAK	3	KEITGIGPSTTTETETIAK3	15128.7	12594.3	6388.02
Q9QX75	Q9QX75	TRDN_RAT	Trdn	Triadin	1	KEKGEAK	KEKGEAK	1	KEKGEAK1	37955.8	38114	947.893
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	KEKPELAEPSHLNGPSSDLEAAFLSR	KEKPELAEPSHLNGPSSDLEAAFLSR	4	KEKPELAEPSHLNGPSSDLEAAFLSR4	9559.53	6134.79	5485.6
Q9JLS3	Q9JLS3	TAOK2_RAT	Taok2	Serine/threonine-protein kinase TAO2	1	KELAALLEAQK	KELAALLEAQK	3	KELAALLEAQK3	4936	8748.76	3932.18
P05065	P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	1	KELADIAHR	KELADIAHR	2	KELADIAHR2	43379.9	48108.5	38440.6
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	KELCFDDELVLQQLR	KELC(UniMod:4)FDDELVLQQLR	3	KELC(UniMod:4)FDDELVLQQLR3	23994.9	19542.7	22991.5
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	KELDTIQECIK	KELDTIQEC(UniMod:4)IK	2	KELDTIQEC(UniMod:4)IK2	2478.05	1641.85	1399.22
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	KELDTIQECIK	KELDTIQEC(UniMod:4)IK	3	KELDTIQEC(UniMod:4)IK3	50223	46623.1	38455.1
F1M086	F1M086	F1M086_RAT	Elp4	Elongator complex protein 4	1	KELEDVHSAKPPEADANMK	KELEDVHSAKPPEADANMK	4	KELEDVHSAKPPEADANMK4	5922.06	7183.28	4701.92
B0BNA5	B0BNA5	COTL1_RAT	Cotl1	Coactosin-like protein	1	KELEEDFIR	KELEEDFIR	2	KELEEDFIR2	7225.22	5001.52	1489.31
B0BNA5	B0BNA5	COTL1_RAT	Cotl1	Coactosin-like protein	1	KELEEDFIR	KELEEDFIR	3	KELEEDFIR3	43516.6	29489.9	34914.6
B3GNI6	B3GNI6	SEP11_RAT	Septin11	Septin-11	1	KELEEEVSNFQK	KELEEEVSNFQK	2	KELEEEVSNFQK2	2619	4673.71	2808.05
B3GNI6	B3GNI6	SEP11_RAT	Septin11	Septin-11	1	KELEEEVSNFQK	KELEEEVSNFQK	3	KELEEEVSNFQK3	119200	120185	133723
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	KELEEIVQPIISK	KELEEIVQPIISK	2	KELEEIVQPIISK2	275505	276097	232168
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	KELEEIVQPIISK	KELEEIVQPIISK	3	KELEEIVQPIISK3	3.80397e+06	3.71952e+06	3.78686e+06
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	KELEEQLGPVAEETR	KELEEQLGPVAEETR	2	KELEEQLGPVAEETR2	6.52157e+06	6.47576e+06	5.84249e+06
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	KELEEQLGPVAEETR	KELEEQLGPVAEETR	3	KELEEQLGPVAEETR3	241425	307636	257970
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	KELEEQLGPVAEETR	KELEEQLGPVAEETR	4	KELEEQLGPVAEETR4	33698.8	45392.2	35327.4
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	KELEEQLGPVAEETRAR	KELEEQLGPVAEETRAR	3	KELEEQLGPVAEETRAR3	63565.1	32796.9	71546.1
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	KELEEQLGPVAEETRAR	KELEEQLGPVAEETRAR	4	KELEEQLGPVAEETRAR4	531706	536389	812873
O35314	O35314	SCG1_RAT	Chgb	Secretogranin-1	1	KELENLAAMDLELQK	KELENLAAMDLELQK	3	KELENLAAMDLELQK3	4464.22		8050.32
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	KELENQMGSLK	KELENQMGSLK	2	KELENQMGSLK2	3657.26	3185.22	4771.61
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	KELENQMGSLK	KELENQMGSLK	3	KELENQMGSLK3	34688.1	28678.6	33644.7
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	KELENTVLELSQK	KELENTVLELSQK	3	KELENTVLELSQK3	13623.5	15641	18882.7
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	KELEQIFCQFDSK	KELEQIFC(UniMod:4)QFDSK	3	KELEQIFC(UniMod:4)QFDSK3	17839.7	15731.8	14751.4
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	KELEVHTEALIAEASK	KELEVHTEALIAEASK	4	KELEVHTEALIAEASK4	6121.81	3000.42	4700.88
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	KELGLEK	KELGLEK	2	KELGLEK2	12861.7	10722.4	10968.5
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	KELGLEKDDK	KELGLEKDDK	3	KELGLEKDDK3	5668.91	8440.07	
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	KELHDSEGQQLALNK	KELHDSEGQQLALNK	3	KELHDSEGQQLALNK3	8656.1	13563.1	5835.57
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	KELHDSEGQQLALNK	KELHDSEGQQLALNK	4	KELHDSEGQQLALNK4	8631.82	15311	12217.4
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	KELHPLFDETFEFLVPAEPCQK	KELHPLFDETFEFLVPAEPC(UniMod:4)QK	3	KELHPLFDETFEFLVPAEPC(UniMod:4)QK3	103618	112112	97260.3
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	KELHPLFDETFEFLVPAEPCQK	KELHPLFDETFEFLVPAEPC(UniMod:4)QK	4	KELHPLFDETFEFLVPAEPC(UniMod:4)QK4	56051	71931.5	47197.3
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	KELIECAR	KELIEC(UniMod:4)AR	2	KELIEC(UniMod:4)AR2	267249	226577	229718
Q64303	Q64303	PAK2_RAT	Pak2	Serine/threonine-protein kinase PAK 2	1	KELIINEILVMK	KELIINEILVMK	3	KELIINEILVMK3	20167.2	21036.5	11677.7
P30427	P30427	PLEC_RAT	Plec	Plectin	1	KELIPAEEALR	KELIPAEEALR	3	KELIPAEEALR3	11977.4		6339.18
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	KELLEYDLQQR	KELLEYDLQQR	3	KELLEYDLQQR3	9691.66	14038.3	12990.8
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	KELLLDMFSDVFFGIPAVLMSR	KELLLDMFSDVFFGIPAVLMSR	3	KELLLDMFSDVFFGIPAVLMSR3	5333.28		
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	KELNMEPADLMNR	KELNMEPADLMNR	2	KELNMEPADLMNR2	15333.9	12445.8	12294.7
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	KELNMEPADLMNR	KELNMEPADLMNR	3	KELNMEPADLMNR3	204348	215989	211619
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	KELNMGQR	KELNMGQR	2	KELNMGQR2	20192.5	15495.2	12783.6
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	KELNSFLESQK	KELNSFLESQK	3	KELNSFLESQK3	29585.1	40955.3	22832.5
P16617	A0A8I6A6N5;P16617	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	0	KELNYFAK	KELNYFAK	2	KELNYFAK2	37120.4	23322.9	28367.6
A0A0G2K012	A0A0G2K012	A0A0G2K012_RAT	Ubxn6	UBX domain protein 6	1	KELQAEATSSNNPGAPGTNSVPETK	KELQAEATSSNNPGAPGTNSVPETK	3	KELQAEATSSNNPGAPGTNSVPETK3	6292.44		6470.18
Q6U6G5	Q6U6G5	ZC3HF_RAT	Zc3h15	Zinc finger CCCH domain-containing protein 15	1	KELQELNELFKPVVAAQK	KELQELNELFKPVVAAQK	3	KELQELNELFKPVVAAQK3	5659.27	6488.09	3911.41
Q6U6G5	Q6U6G5	ZC3HF_RAT	Zc3h15	Zinc finger CCCH domain-containing protein 15	1	KELQELNELFKPVVAAQK	KELQELNELFKPVVAAQK	4	KELQELNELFKPVVAAQK4	11577.1	9473.69	13015.3
O08658	O08658	NUP88_RAT	Nup88	Nuclear pore complex protein Nup88	1	KELQLIPDQLRHLGNAIK	KELQLIPDQLRHLGNAIK	3	KELQLIPDQLRHLGNAIK3	904.287		4884.65
Q5U2V8	Q5U2V8	EMC3_RAT	Emc3	ER membrane protein complex subunit 3	1	KELQTSIF	KELQTSIF	2	KELQTSIF2	23882.2	19599	24055.6
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	KELSAEELSQR	KELSAEELSQR	3	KELSAEELSQR3	13266.6	13607	12226.6
F1M9D6	F1M9D6	F1M9D6_RAT	Stat1	Signal transducer and activator of transcription	1	KELSAVTFPDIIR	KELSAVTFPDIIR	3	KELSAVTFPDIIR3	27786.9	23197.9	29356.6
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	KELSENINAVTLLR	KELSENINAVTLLR	3	KELSENINAVTLLR3	10256.2	8033	7744.16
Q4FZV0	Q4FZV0	MANBA_RAT	Manba	Beta-mannosidase	1	KELSVLFYPWKPTSK	KELSVLFYPWKPTSK	4	KELSVLFYPWKPTSK4	9198.78	21047.4	14893.5
F1M7Y5	F1M7Y5	KPCI_RAT	Prkci	Protein kinase C iota type	1	KELVNDDEDIDWVQTEK	KELVNDDEDIDWVQTEK	3	KELVNDDEDIDWVQTEK3	2990.61	2957.58	
Q8R491	Q8R491	EHD3_RAT	Ehd3	EH domain-containing protein 3	1	KELVNNLAEIYGR	KELVNNLAEIYGR	2	KELVNNLAEIYGR2	17964.1	8469.63	11624.9
Q8R491	Q8R491	EHD3_RAT	Ehd3	EH domain-containing protein 3	1	KELVNNLAEIYGR	KELVNNLAEIYGR	3	KELVNNLAEIYGR3	176977	116067	232611
Q641Z6	Q641Z6	EHD1_RAT	Ehd1	EH domain-containing protein 1	1	KELVNNLGEIYQK	KELVNNLGEIYQK	3	KELVNNLGEIYQK3	21432.5	25788.6	19842.5
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	KELVQVQTLMDNMTLER	KELVQVQTLMDNMTLER	3	KELVQVQTLMDNMTLER3	2427.52	3715.94	8146
Q66H09	Q66H09	Q66H09_RAT	Ttc1	Tetratricopeptide repeat domain 1	1	KEMAITDCSK	KEMAITDC(UniMod:4)SK	2	KEMAITDC(UniMod:4)SK2	49276.8	31642.4	
Q66H09	Q66H09	Q66H09_RAT	Ttc1	Tetratricopeptide repeat domain 1	1	KEMAITDCSK	KEMAITDC(UniMod:4)SK	3	KEMAITDC(UniMod:4)SK3	14834	38298.7	42598.1
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	KEMALLATSLPDGIMVK	KEMALLATSLPDGIMVK	3	KEMALLATSLPDGIMVK3	12111.7	13654.8	19099.2
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	KEMASGVNTR	KEMASGVNTR	2	KEMASGVNTR2			10087.6
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	KEMEDWISSLK	KEMEDWISSLK	3	KEMEDWISSLK3	8145.15	10081.3	8016.1
Q8CGZ2	Q8CGZ2	ADIP_RAT	Ssx2ip	Afadin- and alpha-actinin-binding protein	1	KEMISLLSPQK	KEMISLLSPQK	3	KEMISLLSPQK3	6076.98	6768.11	2568.82
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	KEMLDVK	KEMLDVK	2	KEMLDVK2	6627	13036.7	12076.5
Q8R491	Q8R491;Q4V8H8	EHD3_RAT	Ehd3	EH domain-containing protein 3	0	KEMPSVFGK	KEMPSVFGK	2	KEMPSVFGK2	28373.9	22948.9	18057.7
P63102	P35213;P63102;P68255	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	0	KEMQPTHPIR	KEMQPTHPIR	2	KEMQPTHPIR2	420773		320519
P63102	P35213;P63102;P68255	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	0	KEMQPTHPIR	KEMQPTHPIR	3	KEMQPTHPIR3	2.85497e+06		2.41115e+06
P63102	P35213;P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	0	KEMQPTHPIRLGLALNFSVFYYEILNSPEK	KEMQPTHPIRLGLALNFSVFYYEILNSPEK	4	KEMQPTHPIRLGLALNFSVFYYEILNSPEK4	19267.1	15209.2	15447.7
Q9Z118	Q9Z118	PTBP3_RAT	Ptbp3	Polypyrimidine tract-binding protein 3	1	KENALVQMADASQAQIAMNHLSGQR	KENALVQMADASQAQIAMNHLSGQR	4	KENALVQMADASQAQIAMNHLSGQR4	17512.1	15238.1	15609.7
D3ZK09	D3ZK09	D3ZK09_RAT	Scyl3	SCY1 like pseudokinase 3	1	KENAPGETPCLLSPALFQSR	KENAPGETPC(UniMod:4)LLSPALFQSR	3	KENAPGETPC(UniMod:4)LLSPALFQSR3	25195.8	23936.2	30204.4
Q99MI7	Q99MI7	UBA3_RAT	Uba3	NEDD8-activating enzyme E1 catalytic subunit	1	KENCPACSQLPQNIQFSPSAK	KENC(UniMod:4)PAC(UniMod:4)SQLPQNIQFSPSAK	3	KENC(UniMod:4)PAC(UniMod:4)SQLPQNIQFSPSAK3	2208.21		1230.72
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	KENDFALIIDGK	KENDFALIIDGK	2	KENDFALIIDGK2		2447.8	1238.82
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	KENDFALIIDGK	KENDFALIIDGK	3	KENDFALIIDGK3	18400	21478.4	21253.9
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	KENEEAEPSPVPGTPTLR	KENEEAEPSPVPGTPTLR	3	KENEEAEPSPVPGTPTLR3	99818.2	100904	109695
D3ZJF9	D3ZJF9	D3ZJF9_RAT	Gla	Alpha-galactosidase	1	KENEIEVWERPLSNLAWAVAVR	KENEIEVWERPLSNLAWAVAVR	4	KENEIEVWERPLSNLAWAVAVR4	28015.5	20087.9	14366.3
Q6XUX2	Q6XUX2	DUSTY_RAT	Dstyk	Dual serine/threonine and tyrosine protein kinase	1	KENELYESLMNIANR	KENELYESLMNIANR	3	KENELYESLMNIANR3	4714.99	2811.54	
D3ZTN1	D3ZTN1	D3ZTN1_RAT	Tesc	Tescalcin	1	KENFNNVPDLELNPIR	KENFNNVPDLELNPIR	3	KENFNNVPDLELNPIR3	68502	71608.7	62505
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	KENGLKEPVIHISK	KENGLKEPVIHISK	4	KENGLKEPVIHISK4	3157.44	5746.88	3817.14
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	KENIVAFDDMIEPYR	KENIVAFDDMIEPYR	3	KENIVAFDDMIEPYR3	46461.8	47542.3	41028.6
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	KENLLSLTCQHQFCR	KENLLSLTC(UniMod:4)QHQFC(UniMod:4)R	4	KENLLSLTC(UniMod:4)QHQFC(UniMod:4)R4	53377	68801.8	68112.9
Q6PEC4	Q6PEC4	SKP1_RAT	Skp1	S-phase kinase-associated protein 1	1	KENQWCEEK	KENQWC(UniMod:4)EEK	3	KENQWC(UniMod:4)EEK3		14555.3	6297.29
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	KENSSEICSNNGECVCGQCVCR	KENSSEIC(UniMod:4)SNNGEC(UniMod:4)VC(UniMod:4)GQC(UniMod:4)VC(UniMod:4)R	3	KENSSEIC(UniMod:4)SNNGEC(UniMod:4)VC(UniMod:4)GQC(UniMod:4)VC(UniMod:4)R3	2908.8		4132.8
Q9QZK5	Q9QZK5	HTRA1_RAT	Htra1	Serine protease HTRA1	1	KENTLNMVVR	KENTLNMVVR	3	KENTLNMVVR3		5694.21	2514.05
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	KENVLLSSELQR	KENVLLSSELQR	2	KENVLLSSELQR2	5003.23	1649.32	5007.23
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	KENVLLSSELQR	KENVLLSSELQR	3	KENVLLSSELQR3	76794.1	63490.9	79230.3
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	KENWGPWSAGGSR	KENWGPWSAGGSR	3	KENWGPWSAGGSR3	28863.9	40113.9	36568.3
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	KEPALLELEGK	KEPALLELEGK	2	KEPALLELEGK2	544184	586608	467408
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	KEPALLELEGK	KEPALLELEGK	3	KEPALLELEGK3	1.11311e+06	1.33063e+06	1.08504e+06
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	KEPALLELEGKK	KEPALLELEGKK	3	KEPALLELEGKK3	54877.8	48560.4	51750.1
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	KEPEFPVEPVGEK	KEPEFPVEPVGEK	2	KEPEFPVEPVGEK2	26097.9	28176.2	23603.4
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	KEPEFPVEPVGEK	KEPEFPVEPVGEK	3	KEPEFPVEPVGEK3	154760	154751	138398
Q641Z6	Q641Z6	EHD1_RAT	Ehd1	EH domain-containing protein 1	1	KEPELFQTVAEGLR	KEPELFQTVAEGLR	3	KEPELFQTVAEGLR3	23785.1	23076.9	23053.3
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	KEPEPNFQLLDNPAR	KEPEPNFQLLDNPAR	2	KEPEPNFQLLDNPAR2	11577.3	8061.85	6221.69
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	KEPEPNFQLLDNPAR	KEPEPNFQLLDNPAR	3	KEPEPNFQLLDNPAR3	144790	162826	139825
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	KEPEVITVTLK	KEPEVITVTLK	3	KEPEVITVTLK3	1847.19	1740.16	
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	KEPFFHGHDNYDQLVR	KEPFFHGHDNYDQLVR	4	KEPFFHGHDNYDQLVR4	19486.3	27029.7	27819.2
F7FH41	F7FH41	F7FH41_RAT	Csnk2a2	Casein kinase 2 alpha 2	1	KEPFFHGQDNYDQLVR	KEPFFHGQDNYDQLVR	3	KEPFFHGQDNYDQLVR3	2832.39	7173.44	1865.23
F7FH41	F7FH41	F7FH41_RAT	Csnk2a2	Casein kinase 2 alpha 2	1	KEPFFHGQDNYDQLVR	KEPFFHGQDNYDQLVR	4	KEPFFHGQDNYDQLVR4	23915.4	30888	33065
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	KEPFTLEAYYSSPQDLPYPDPAIAQFSVQK	KEPFTLEAYYSSPQDLPYPDPAIAQFSVQK	4	KEPFTLEAYYSSPQDLPYPDPAIAQFSVQK4	4462.27	9743.32	8960.83
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	KEPMQVWFLSR	KEPMQVWFLSR	2	KEPMQVWFLSR2	46841.8	39400.2	35706
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	KEPMQVWFLSR	KEPMQVWFLSR	3	KEPMQVWFLSR3	152587	182639	173046
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	KEPPALDPESQEEPQPPVLK	KEPPALDPESQEEPQPPVLK	3	KEPPALDPESQEEPQPPVLK3	19462.9	17679.9	18692.6
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	KEPPKEEPAQLSGPEAGR	KEPPKEEPAQLSGPEAGR	4	KEPPKEEPAQLSGPEAGR4	6986.1	7801.39	7757.88
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	KEPPPCPDPGVSSPSIMLPK	KEPPPC(UniMod:4)PDPGVSSPSIMLPK	3	KEPPPC(UniMod:4)PDPGVSSPSIMLPK3	8285.49	4811.6	4439.35
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	KEPTLLSPLHCWAMLLEHTR	KEPTLLSPLHC(UniMod:4)WAMLLEHTR	4	KEPTLLSPLHC(UniMod:4)WAMLLEHTR4	15097.1	12924	10166.4
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	KEPTQADGEDQILDKEDTLPEEESR	KEPTQADGEDQILDKEDTLPEEESR	4	KEPTQADGEDQILDKEDTLPEEESR4	28737.9	27486.2	33199.8
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	KEPVHLSGYGVELAIK	KEPVHLSGYGVELAIK	3	KEPVHLSGYGVELAIK3	99058.4	79700.8	71125.8
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	KEPVHLSGYGVELAIK	KEPVHLSGYGVELAIK	4	KEPVHLSGYGVELAIK4	66974.5	61518.1	60271.2
Q63100	Q63100	DC1I1_RAT	Dync1i1	Cytoplasmic dynein 1 intermediate chain 1	1	KEPVPDDSDLDR	KEPVPDDSDLDR	3	KEPVPDDSDLDR3	10652.8	9833.45	10319.4
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	KEQAVTLAK	KEQAVTLAK	2	KEQAVTLAK2	4647.79	10216.9	19935.9
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	KEQDDLLVLLADQDQK	KEQDDLLVLLADQDQK	2	KEQDDLLVLLADQDQK2	23947.8	38685.8	22496.4
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	KEQDDLLVLLADQDQK	KEQDDLLVLLADQDQK	3	KEQDDLLVLLADQDQK3	136174	183223	143272
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	KEQMPLTSPR	KEQMPLTSPR	2	KEQMPLTSPR2	63185.8	57602.6	55881
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	KEQMPLTSPR	KEQMPLTSPR	3	KEQMPLTSPR3	518705	567907	518212
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	KEQPGVYTK	KEQPGVYTK	2	KEQPGVYTK2	29509.6		27812.4
A0A8I5ZQ72	A0A8I5ZQ72	A0A8I5ZQ72_RAT	Zc3h12c	Zinc finger CCCH type containing 12C	1	KEQSRPDALITDQEILR	KEQSRPDALITDQEILR	4	KEQSRPDALITDQEILR4	2670.14		3158.18
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	KEQTLISMPYHVCTLK	KEQTLISMPYHVC(UniMod:4)TLK	4	KEQTLISMPYHVC(UniMod:4)TLK4	9382.16	12981.9	6428.04
B1PLB1	B1PLB1	B1PLB1_RAT	Cd34	CD34 molecule	1	KERGEELMQILCK	KERGEELMQILC(UniMod:4)K	3	KERGEELMQILC(UniMod:4)K3		14848.1	
B1PLB1	B1PLB1	B1PLB1_RAT	Cd34	CD34 molecule	1	KERGEELMQILCK	KERGEELMQILC(UniMod:4)K	4	KERGEELMQILC(UniMod:4)K4	11936.4	34733	26811.3
Q62812	Q63862;Q62812	MYH9_RAT	Myh9	Myosin-9	0	KERNTDQASMPDNTAAQK	KERNTDQASMPDNTAAQK	3	KERNTDQASMPDNTAAQK3	4607.24		6474.33
P51792	P51792	CLCN3_RAT	Clcn3	H(+)/Cl(-) exchange transporter 3	1	KESAWEMTK	KESAWEMTK	2	KESAWEMTK2	10942.4	7971.69	10310.1
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	KESEVSREDEYK	KESEVSREDEYK	3	KESEVSREDEYK3			4176.52
Q6AXV4	Q6AXV4	SAM50_RAT	Samm50	Sorting and assembly machinery component 50 homolog	1	KESGHSLK	KESGHSLK	2	KESGHSLK2	122114	190530	154074
O35763	O35763	MOES_RAT	Msn	Moesin	1	KESPLLFK	KESPLLFK	2	KESPLLFK2	26388.3	19529	18016.8
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	KESQLLEADLQVDKER	KESQLLEADLQVDKER	3	KESQLLEADLQVDKER3	5881.08	2922.85	2799.37
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	KESQLLEADLQVDKER	KESQLLEADLQVDKER	4	KESQLLEADLQVDKER4	16585.7	15838.7	17910.4
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	KESVAHWEAQIAEIIQWVSDEK	KESVAHWEAQIAEIIQWVSDEK	4	KESVAHWEAQIAEIIQWVSDEK4			3395.91
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	KESVAHWEAQIAEIIQWVSDEKDAR	KESVAHWEAQIAEIIQWVSDEKDAR	4	KESVAHWEAQIAEIIQWVSDEKDAR4	7837.13	16125.1	12300.3
P08650	P08650	CO5_RAT	C5	Complement C5	1	KETACKPEIAYAYK	KETAC(UniMod:4)KPEIAYAYK	3	KETAC(UniMod:4)KPEIAYAYK3	11297.7	8402.91	33216.3
P08650	P08650	CO5_RAT	C5	Complement C5	1	KETACKPEIAYAYK	KETAC(UniMod:4)KPEIAYAYK	4	KETAC(UniMod:4)KPEIAYAYK4	44878.7	56013.6	16248.7
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	KETARPGFEAVDGSPDTYK	KETARPGFEAVDGSPDTYK	4	KETARPGFEAVDGSPDTYK4	11352.7	24439.3	19715.8
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	KETATATETPESTEASPSV	KETATATETPESTEASPSV	2	KETATATETPESTEASPSV2	31511.5	23718.8	19232.6
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	KETEGDVTSVK	KETEGDVTSVK	2	KETEGDVTSVK2	56575	57241.2	48500.9
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	KETEGDVTSVK	KETEGDVTSVK	3	KETEGDVTSVK3	126027	141759	112866
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	KETELQLQLTENLK	KETELQLQLTENLK	3	KETELQLQLTENLK3	4147.21	5607.91	3881.58
P35284	P35284	RAB12_RAT	Rab12	Ras-related protein Rab-12	1	KETFDDLPK	KETFDDLPK	2	KETFDDLPK2	2724.76		4603.09
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	KETGASSFLCR	KETGASSFLC(UniMod:4)R	2	KETGASSFLC(UniMod:4)R2	5489.82		5542.19
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	KETGASSFLCR	KETGASSFLC(UniMod:4)R	3	KETGASSFLC(UniMod:4)R3	77129.5	72725.2	76960.1
Q6Q0N0	Q6Q0N0	CSTN1_RAT	Clstn1	Calsyntenin-1	1	KETILCSSDK	KETILC(UniMod:4)SSDK	2	KETILC(UniMod:4)SSDK2	3204.89		
Q5PQN7	Q5PQN7	LZIC_RAT	Lzic	Protein LZIC	1	KETLEQLSEFNDSLKK	KETLEQLSEFNDSLKK	3	KETLEQLSEFNDSLKK3	8019.38	7458.47	5680.61
Q5PQN7	Q5PQN7	LZIC_RAT	Lzic	Protein LZIC	1	KETLEQLSEFNDSLKK	KETLEQLSEFNDSLKK	4	KETLEQLSEFNDSLKK4	8143.47	15793.4	7532.21
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	KETLSSAAK	KETLSSAAK	2	KETLSSAAK2			19129.7
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	KETLVQLVPFFVDITPPGEPLSK	KETLVQLVPFFVDITPPGEPLSK	3	KETLVQLVPFFVDITPPGEPLSK3	10506.3	6859.04	14214.8
B2GUY0	B2GUY0	MA1B1_RAT	Man1b1	Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase	1	KETQLLEDYVR	KETQLLEDYVR	3	KETQLLEDYVR3	26402.2	26054.5	15820.4
G3V728	G3V728	G3V728_RAT	Nipsnap1	Nipsnap homolog 1	1	KETSNLYK	KETSNLYK	2	KETSNLYK2	16510		16146.5
A4V8B4	A4V8B4	SAV1_RAT	Sav1	Protein salvador homolog 1	1	KETSPLLR	KETSPLLR	2	KETSPLLR2	14427.6	10489.6	
Q5RK08	Q5RK08	Q5RK08_RAT	Nipsnap2	Glioblastoma amplified sequence	1	KETSSLYK	KETSSLYK	2	KETSSLYK2	32343.3	41800.9	33275.8
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	KETVEAIQEEETSSQGK	KETVEAIQEEETSSQGK	3	KETVEAIQEEETSSQGK3	13404.6	7224.3	8817.42
P20760	P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	1	KETWQQGNTFTCSVLHEGLHNHHTEK	KETWQQGNTFTC(UniMod:4)SVLHEGLHNHHTEK	4	KETWQQGNTFTC(UniMod:4)SVLHEGLHNHHTEK4	112452	103632	56721.5
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	KEVEGTAGLLYVDDPNWPGIGVVR	KEVEGTAGLLYVDDPNWPGIGVVR	3	KEVEGTAGLLYVDDPNWPGIGVVR3	17770.9	15350	14658.7
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	KEVELTEINR	KEVELTEINR	3	KEVELTEINR3	16326.4	13643.1	9724.79
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	KEVELTEINRR	KEVELTEINRR	3	KEVELTEINRR3	55870.4	64051.3	29449.8
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	KEVESLNEALR	KEVESLNEALR	3	KEVESLNEALR3	13215.1	8061.32	9839.49
P08649	P08649	CO4_RAT	C4	Complement C4	1	KEVFAPTSIFQDDFIIPDISEPGTWK	KEVFAPTSIFQDDFIIPDISEPGTWK	4	KEVFAPTSIFQDDFIIPDISEPGTWK4	496141	456767	592044
P08649	P08649	CO4_RAT	C4	Complement C4	1	KEVFAPTSIFQDDFIIPDISEPGTWKISAR	KEVFAPTSIFQDDFIIPDISEPGTWKISAR	4	KEVFAPTSIFQDDFIIPDISEPGTWKISAR4	7481.02	10421.6	8502.38
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	KEVGDELGAKPQLEMVTEATSDTSK	KEVGDELGAKPQLEMVTEATSDTSK	4	KEVGDELGAKPQLEMVTEATSDTSK4	21623.4	28287.9	32862.9
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	KEVHESESHQLALQK	KEVHESESHQLALQK	3	KEVHESESHQLALQK3	8866.05	8447.17	4106.39
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	KEVHESESHQLALQK	KEVHESESHQLALQK	4	KEVHESESHQLALQK4	33450.3	45854.2	37527.9
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	KEVHLGACGALK	KEVHLGAC(UniMod:4)GALK	3	KEVHLGAC(UniMod:4)GALK3	19356.2	7390.71	9233.53
Q63484	P47197;Q63484	AKT3_RAT	Akt3	RAC-gamma serine/threonine-protein kinase	0	KEVIIAK	KEVIIAK	2	KEVIIAK2	4484.07	3131.44	4286.19
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	KEVIPVNILDAQEEMK	KEVIPVNILDAQEEMK	3	KEVIPVNILDAQEEMK3	30112.1	28775.3	12984.6
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	KEVIPVNILDAQEEMKEVAR	KEVIPVNILDAQEEMKEVAR	3	KEVIPVNILDAQEEMKEVAR3	4581.3	5538.88	6385.86
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	KEVIPVNILDAQEEMKEVAR	KEVIPVNILDAQEEMKEVAR	4	KEVIPVNILDAQEEMKEVAR4	49969.9	53067.4	50599.9
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	KEVLNMLK	KEVLNMLK	2	KEVLNMLK2	10365.1	10052.8	
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	KEVLTNMYSR	KEVLTNMYSR	3	KEVLTNMYSR3	14555.8	15055.4	18488.8
G3V965	G3V965	G3V965_RAT	Agpat5	1-acylglycerol-3-phosphate O-acyltransferase 5	1	KEVPEEQEHMK	KEVPEEQEHMK	3	KEVPEEQEHMK3			4963.84
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	KEVQALIAEGIALVWESYK	KEVQALIAEGIALVWESYK	3	KEVQALIAEGIALVWESYK3	4323.06	2387.67	1404.68
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	KEVQCLRDELQVIQK	KEVQC(UniMod:4)LRDELQVIQK	3	KEVQC(UniMod:4)LRDELQVIQK3	11716.4	9715.06	7982.55
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	KEVQCLRDELQVIQK	KEVQC(UniMod:4)LRDELQVIQK	4	KEVQC(UniMod:4)LRDELQVIQK4	6246.44		13023
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	KEVTFHCLEGYVLQGTPK	KEVTFHC(UniMod:4)LEGYVLQGTPK	3	KEVTFHC(UniMod:4)LEGYVLQGTPK3	10749.2	10865.9	14148.8
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	KEVTFHCLEGYVLQGTPK	KEVTFHC(UniMod:4)LEGYVLQGTPK	4	KEVTFHC(UniMod:4)LEGYVLQGTPK4	30930.6	35625.6	34218.2
Q63377	A0A8I6AFS5;Q63377	AT1B3_RAT	Atp1b3	Sodium/potassium-transporting ATPase subunit beta-3	0	KEVTIECQIDGTR	KEVTIEC(UniMod:4)QIDGTR	2	KEVTIEC(UniMod:4)QIDGTR2	1856.05	2850.73	4041.25
Q63377	A0A8I6AFS5;Q63377	AT1B3_RAT	Atp1b3	Sodium/potassium-transporting ATPase subunit beta-3	0	KEVTIECQIDGTR	KEVTIEC(UniMod:4)QIDGTR	3	KEVTIEC(UniMod:4)QIDGTR3	7629.43	42191.4	35659
D3ZCK2	D3ZCK2	D3ZCK2_RAT	Nkiras2	NFKB inhibitor interacting Ras-like 2	1	KEVTIVVLGNK	KEVTIVVLGNK	3	KEVTIVVLGNK3	12016.9	5340.62	5107.2
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	KEVYFMAIIDILTHYDAK	KEVYFMAIIDILTHYDAK	3	KEVYFMAIIDILTHYDAK3		4334.86	5134.53
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	KEVYFMAIIDILTHYDAK	KEVYFMAIIDILTHYDAK	4	KEVYFMAIIDILTHYDAK4	3802.05	4930.24	6568.1
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	KEVYFMAIIDILTHYDAKK	KEVYFMAIIDILTHYDAKK	4	KEVYFMAIIDILTHYDAKK4	222.516	6689.29	2438.38
O88377	O88377	PI42B_RAT	Pip4k2b	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta	1	KEVYFMAIIDILTPYDAK	KEVYFMAIIDILTPYDAK	3	KEVYFMAIIDILTPYDAK3		5960.99	5346.81
O88377	O88377	PI42B_RAT	Pip4k2b	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta	1	KEVYFMAIIDILTPYDAKK	KEVYFMAIIDILTPYDAKK	4	KEVYFMAIIDILTPYDAKK4	1608.8	711.232	3853.97
P0C2X9	P0C2X9	AL4A1_RAT	Aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1	KEWDLKPVADR	KEWDLKPVADR	3	KEWDLKPVADR3	104417	87388.4	59792.4
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	KEWDVLENECR	KEWDVLENEC(UniMod:4)R	2	KEWDVLENEC(UniMod:4)R2	5977.68	6617.14	3482.59
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	KEWDVLENECR	KEWDVLENEC(UniMod:4)R	3	KEWDVLENEC(UniMod:4)R3	69936.1	83517.8	100519
P15943	P15943	APLP2_RAT	Aplp2	Amyloid beta precursor like protein 2	1	KEWEEAELQAK	KEWEEAELQAK	2	KEWEEAELQAK2	4710.02	3310	4793.62
P15943	P15943	APLP2_RAT	Aplp2	Amyloid beta precursor like protein 2	1	KEWEEAELQAK	KEWEEAELQAK	3	KEWEEAELQAK3	11801.8	18841.2	14717.5
F1M1H0	F1M1H0	F1M1H0_RAT	Dera	deoxyribose-phosphate aldolase	1	KEWQAAWLLK	KEWQAAWLLK	2	KEWQAAWLLK2	4406.47	2406.13	
F1M1H0	F1M1H0	F1M1H0_RAT	Dera	deoxyribose-phosphate aldolase	1	KEWQAAWLLK	KEWQAAWLLK	3	KEWQAAWLLK3	8925.18	6995.6	8856.08
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	KEWQSSQR	KEWQSSQR	2	KEWQSSQR2			7259.46
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	KEWSGLLEELAK	KEWSGLLEELAK	3	KEWSGLLEELAK3	29107.3	27954.1	29124.1
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	KEYDPVGQTVNNPR	KEYDPVGQTVNNPR	3	KEYDPVGQTVNNPR3	12174.3	9226.22	7128.55
P85515	P85515	ACTZ_RAT	Actr1a	Alpha-centractin	1	KEYEEDGAR	KEYEEDGAR	2	KEYEEDGAR2			485692
P98166	P98166	VLDLR_RAT	Vldlr	Very low-density lipoprotein receptor	1	KEYIQLVEQLR	KEYIQLVEQLR	3	KEYIQLVEQLR3	8271.63	8728.54	
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	KEYITAK	KEYITAK	2	KEYITAK2	7059.61	5631.65	4156.59
P30121	P30121	TIMP2_RAT	Timp2	Metalloproteinase inhibitor 2	1	KEYLIAGK	KEYLIAGK	2	KEYLIAGK2	8840	10366.8	13725.6
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	KEYMGLAIK	KEYMGLAIK	2	KEYMGLAIK2	10870.1		6630.85
A0A8I6B3N0	A0A8I6B3N0;E9PSK7	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	0	KEYNALHQR	KEYNALHQR	3	KEYNALHQR3			6081.74
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	KEYTEENIQLVADGCCNLQK	KEYTEENIQLVADGC(UniMod:4)C(UniMod:4)NLQK	3	KEYTEENIQLVADGC(UniMod:4)C(UniMod:4)NLQK3			4101.09
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	KEYVFSDSKK	KEYVFSDSKK	3	KEYVFSDSKK3	7621.64	5622.92	5032.57
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	KEYVHLVCQMR	KEYVHLVC(UniMod:4)QMR	3	KEYVHLVC(UniMod:4)QMR3	11838	9391.21	9568.38
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	KFAADFAAEAASK	KFAADFAAEAASK	2	KFAADFAAEAASK2	690.99	5777.34	5104.9
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	KFAADFAAEAASK	KFAADFAAEAASK	3	KFAADFAAEAASK3	29907	24432.9	33392.2
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	KFAEAFEAIPR	KFAEAFEAIPR	3	KFAEAFEAIPR3	28609.4	39815.3	28104.2
Q68FR6	A0A8I6AKG3;A0A8I5Y6C6;Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	0	KFAESQPK	KFAESQPK	2	KFAESQPK2	373474		169626
D3ZJD8	D3ZJD8	D3ZJD8_RAT	Clec1b	C-type lectin domain family 1 member B	1	KFCQELIR	KFC(UniMod:4)QELIR	2	KFC(UniMod:4)QELIR2	44710.5	46209.7	31662.4
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	KFDATSAELQSWILR	KFDATSAELQSWILR	3	KFDATSAELQSWILR3	50581.9	49152.8	54621.8
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	KFDDFQK	KFDDFQK	2	KFDDFQK2	247517	243622	238558
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	KFDDGEDPLDAETQQGGGSNPFHR	KFDDGEDPLDAETQQGGGSNPFHR	4	KFDDGEDPLDAETQQGGGSNPFHR4	8040.36	2557.89	7672.41
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	KFDEVLVNHFCEEFGK	KFDEVLVNHFC(UniMod:4)EEFGK	3	KFDEVLVNHFC(UniMod:4)EEFGK3	7492.31		1808.4
B0BNN4	B0BNN4	B0BNN4_RAT	Cfp	Complement factor properdin	1	KFDGQPCTGK	KFDGQPC(UniMod:4)TGK	2	KFDGQPC(UniMod:4)TGK2	13156.7	10549.3	14429.6
P50398	P50398	GDIA_RAT	Gdi1	Rab GDP dissociation inhibitor alpha	1	KFDLGQDVIDFTGHALALYR	KFDLGQDVIDFTGHALALYR	4	KFDLGQDVIDFTGHALALYR4	4617.48	2603.61	4919.81
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	KFDLGQDVIDFTGHSLALYR	KFDLGQDVIDFTGHSLALYR	4	KFDLGQDVIDFTGHSLALYR4	7318.54	846.133	5298.15
Q62812	F1LNF0;Q63862;Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	KFDQLLAEEK	KFDQLLAEEK	2	KFDQLLAEEK2	311094	419469	411351
Q62812	F1LNF0;Q63862;Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	KFDQLLAEEK	KFDQLLAEEK	3	KFDQLLAEEK3	1.75832e+06	2.36144e+06	2.3689e+06
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	KFDVNTSAVQVLIEHIGNLDR	KFDVNTSAVQVLIEHIGNLDR	3	KFDVNTSAVQVLIEHIGNLDR3		2719.64	
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	KFDVNTSAVQVLIEHIGNLDR	KFDVNTSAVQVLIEHIGNLDR	4	KFDVNTSAVQVLIEHIGNLDR4	6435.1	7033.95	3457.44
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	KFECQGPPSLAVQAK	KFEC(UniMod:4)QGPPSLAVQAK	3	KFEC(UniMod:4)QGPPSLAVQAK3	2466.71		
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	KFEDATVQSDMK	KFEDATVQSDMK	2	KFEDATVQSDMK2	14086.6	9784.23	9268.89
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	KFEDATVQSDMK	KFEDATVQSDMK	3	KFEDATVQSDMK3	62922	72390.6	69015.5
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	KFEDFLVSMENNR	KFEDFLVSMENNR	3	KFEDFLVSMENNR3	12768.6	18275.8	18375.8
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	KFEEFQEELTAR	KFEEFQEELTAR	3	KFEEFQEELTAR3	3718.41	3276.06	7738.8
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	KFEEFQTDLAAHEER	KFEEFQTDLAAHEER	3	KFEEFQTDLAAHEER3	34180.2	38431.4	30668.8
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	KFEEFQTDLAAHEER	KFEEFQTDLAAHEER	4	KFEEFQTDLAAHEER4	32496.4	51957.5	37476.4
P70483	P70483	STRN_RAT	Strn	Striatin	1	KFEESIHDVAFHPSK	KFEESIHDVAFHPSK	3	KFEESIHDVAFHPSK3	9356.04	13007.9	9419.71
P70483	P70483	STRN_RAT	Strn	Striatin	1	KFEESIHDVAFHPSK	KFEESIHDVAFHPSK	4	KFEESIHDVAFHPSK4	59160.4	50630.5	64686.5
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	KFESLFPGK	KFESLFPGK	2	KFESLFPGK2	27220.3	44907.5	36983.3
Q66HR2	Q5XIT1;Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	0	KFFDANYDGK	KFFDANYDGK	2	KFFDANYDGK2	34526.5	40580.3	24978.8
Q66HR2	Q5XIT1;Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	0	KFFDANYDGK	KFFDANYDGK	3	KFFDANYDGK3	30947.3	42384	33612.7
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	KFFDANYDGKEYDPVAAR	KFFDANYDGKEYDPVAAR	3	KFFDANYDGKEYDPVAAR3			6844.93
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	KFFDANYDGKEYDPVAAR	KFFDANYDGKEYDPVAAR	4	KFFDANYDGKEYDPVAAR4	14817.7	22822	22602.2
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	KFFSTVR	KFFSTVR	2	KFFSTVR2	45487.1	56923	44454.5
P19999	P19999	MBL1_RAT	Mbl1	Mannose-binding protein A	1	KFFVTNHER	KFFVTNHER	2	KFFVTNHER2	3862.62	5152.11	1687.11
P19999	P19999	MBL1_RAT	Mbl1	Mannose-binding protein A	1	KFFVTNHER	KFFVTNHER	3	KFFVTNHER3	40184.3	25113.6	45850
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	KFFYSDQNVDSR	KFFYSDQNVDSR	2	KFFYSDQNVDSR2	1859.12	408.087	
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	KFFYSDQNVDSRDPVQLNLLYVQAR	KFFYSDQNVDSRDPVQLNLLYVQAR	4	KFFYSDQNVDSRDPVQLNLLYVQAR4	14529.1	11068	9899.98
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	KFGATLEIVTDK	KFGATLEIVTDK	3	KFGATLEIVTDK3	7918.07	5516.49	6590.54
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	KFGQYAGHVVPTILEK	KFGQYAGHVVPTILEK	4	KFGQYAGHVVPTILEK4	6075.55	2744.07	2895.79
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	KFHEAFIPSPDGDRDIFIDGVVAR	KFHEAFIPSPDGDRDIFIDGVVAR	4	KFHEAFIPSPDGDRDIFIDGVVAR4	8543.22	8967.84	7352.65
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	KFIDIAAAK	KFIDIAAAK	2	KFIDIAAAK2	22456.8	23725.2	19755.7
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	KFIEAAQR	KFIEAAQR	2	KFIEAAQR2	5689.07	8562.84	9751.96
P05545	A0A0G2JSK1;P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	0	KFINDYVSNQTQGK	KFINDYVSNQTQGK	3	KFINDYVSNQTQGK3	9495.09	10691	13581.6
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	KFIQESIFGLCPHMTEDNKDLIQGK	KFIQESIFGLC(UniMod:4)PHMTEDNKDLIQGK	4	KFIQESIFGLC(UniMod:4)PHMTEDNKDLIQGK4	27779	24886.4	19835.5
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	KFLDATQYSAAGSSSVR	KFLDATQYSAAGSSSVR	3	KFLDATQYSAAGSSSVR3			6281.86
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	KFLDDIK	KFLDDIK	2	KFLDDIK2	38785.4	45301.5	31229
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	KFLDDIKK	KFLDDIKK	2	KFLDDIKK2	16927.4	20626.6	12382.3
Q6MG61	Q6MG61	CLIC1_RAT	Clic1	Chloride intracellular channel protein 1	1	KFLDGNELTLADCNLLPK	KFLDGNELTLADC(UniMod:4)NLLPK	3	KFLDGNELTLADC(UniMod:4)NLLPK3	19974.9	20467.1	6369.79
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	KFLSDPQVHTVLVER	KFLSDPQVHTVLVER	4	KFLSDPQVHTVLVER4	2616.57		
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	KFLVSTSQDGR	KFLVSTSQDGR	2	KFLVSTSQDGR2	12364.3	17771.8	11902.6
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	KFLVSTSQDGR	KFLVSTSQDGR	3	KFLVSTSQDGR3	76021.1	110910	94400.9
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	KFMADCPHTIGVEFGTR	KFMADC(UniMod:4)PHTIGVEFGTR	3	KFMADC(UniMod:4)PHTIGVEFGTR3		4620.98	7254.62
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	KFMADCPHTIGVEFGTR	KFMADC(UniMod:4)PHTIGVEFGTR	4	KFMADC(UniMod:4)PHTIGVEFGTR4	7204.38	7750.63	8223.13
F7F288	F7F288	F7F288_RAT	Bcap29	B-cell receptor-associated protein	1	KFMEENER	KFMEENER	2	KFMEENER2	10672.3	16584.3	8119.95
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	KFNALFAQGNYSEAAK	KFNALFAQGNYSEAAK	2	KFNALFAQGNYSEAAK2	10760.6	19661.2	8852.04
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	KFNALFAQGNYSEAAK	KFNALFAQGNYSEAAK	3	KFNALFAQGNYSEAAK3	301219	342862	331562
Q63619	Q63619	COQ7_RAT	Coq7	5-demethoxyubiquinone hydroxylase, mitochondrial (Fragment)	1	KFNELMVAFR	KFNELMVAFR	3	KFNELMVAFR3	2532.69	3734.54	4008.82
Q63635	Q63635	STX6_RAT	Stx6	Syntaxin-6	1	KFNLDATELSIR	KFNLDATELSIR	3	KFNLDATELSIR3	4032.97	4276.01	2480.83
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	KFNMIPFEHR	KFNMIPFEHR	3	KFNMIPFEHR3	48931.2	31513.5	31287.3
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	KFPAVETR	KFPAVETR	2	KFPAVETR2	76738.5	91779.7	56135.6
B0K020	B0K020	CISD1_RAT	Cisd1	CDGSH iron-sulfur domain-containing protein 1	1	KFPFCDGAHIK	KFPFC(UniMod:4)DGAHIK	3	KFPFC(UniMod:4)DGAHIK3	20637.1	20857.8	21085.8
G3V8Z6	G3V8Z6	G3V8Z6_RAT	Krit1	KRIT1, ankyrin repeat containing	1	KFPLDGEK	KFPLDGEK	2	KFPLDGEK2	15959.5	12427	
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	KFPSSTFEQVSQLVK	KFPSSTFEQVSQLVK	2	KFPSSTFEQVSQLVK2	321996	234230	184948
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	KFPSSTFEQVSQLVK	KFPSSTFEQVSQLVK	3	KFPSSTFEQVSQLVK3	1.35096e+06	963258	365808
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	KFPTSTTK	KFPTSTTK	2	KFPTSTTK2	105747	111826	44816
A0A0G2K8N6	A0A0G2K8N6	A0A0G2K8N6_RAT	Ankmy2	Ankyrin repeat and MYND domain containing 2	1	KFPYCEATLLQQLVR	KFPYC(UniMod:4)EATLLQQLVR	3	KFPYC(UniMod:4)EATLLQQLVR3	21709.3	21546.8	19024.4
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	KFQAPAR	KFQAPAR	2	KFQAPAR2	36967.6	46449.9	35910.6
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	KFQILNDEIITILDK	KFQILNDEIITILDK	3	KFQILNDEIITILDK3	15876.1	5508.34	7987.62
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	KFQQGIAPSGPAGELK	KFQQGIAPSGPAGELK	3	KFQQGIAPSGPAGELK3	6564.51	13192.9	13858.3
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	KFQQQILAQQK	KFQQQILAQQK	2	KFQQQILAQQK2	2142.46	336.465	1821.06
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	KFQQQILAQQK	KFQQQILAQQK	3	KFQQQILAQQK3	26445.7	35390.5	33043.8
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	KFQSFIESCLVK	KFQSFIESC(UniMod:4)LVK	2	KFQSFIESC(UniMod:4)LVK2	9278.78	9416.97	13784.2
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	KFQSFIESCLVK	KFQSFIESC(UniMod:4)LVK	3	KFQSFIESC(UniMod:4)LVK3	69713.5	72690.7	57214.9
A2RRU1	A2RRU1	GYS1_RAT	Gys1	Glycogen [starch] synthase, muscle	1	KFSAMHEFQNLHAQSK	KFSAMHEFQNLHAQSK	4	KFSAMHEFQNLHAQSK4		4078.15	3196.69
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	KFSLFSER	KFSLFSER	2	KFSLFSER2	12218.2	16464.7	13230
P09527	P09527	RAB7A_RAT	Rab7a	Ras-related protein Rab-7a	1	KFSNQYK	KFSNQYK	2	KFSNQYK2	32009.7		36191
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	KFTFGLDWVPK	KFTFGLDWVPK	2	KFTFGLDWVPK2	5079.15	7434.6	11525
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	KFTFGLDWVPK	KFTFGLDWVPK	3	KFTFGLDWVPK3	63775.7	40920	42228.4
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	KFTSDSPVVAR	KFTSDSPVVAR	2	KFTSDSPVVAR2	7496.46	1311.51	7822.42
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	KFTSDSPVVAR	KFTSDSPVVAR	3	KFTSDSPVVAR3	39646.9	47495.4	36601.8
Q63377	Q63377	AT1B3_RAT	Atp1b3	Sodium/potassium-transporting ATPase subunit beta-3	1	KFVEDLK	KFVEDLK	2	KFVEDLK2	51964	47234.5	41454.1
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	KFVEEQHTK	KFVEEQHTK	2	KFVEEQHTK2			10997.6
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	KFVEEQHTK	KFVEEQHTK	3	KFVEEQHTK3			8022.07
Q6P7P5	Q6P7P5	5MP2_RAT	Bzw1	eIF5-mimic protein 2	1	KFVEWLK	KFVEWLK	2	KFVEWLK2	19660.2	22440.8	26317
A0A0G2K1L5	A0A0G2K1L5	A0A0G2K1L5_RAT	Reep2	Receptor expression-enhancing protein	1	KFVHPTLSNK	KFVHPTLSNK	3	KFVHPTLSNK3	112527	123949	121488
Q07205	Q07205;A0A8I5ZMQ1	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	KFVLCPECENPETDLHVNPK	KFVLC(UniMod:4)PEC(UniMod:4)ENPETDLHVNPK	3	KFVLC(UniMod:4)PEC(UniMod:4)ENPETDLHVNPK3	9316.18	7936.63	
Q07205	Q07205;A0A8I5ZMQ1	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	KFVLCPECENPETDLHVNPK	KFVLC(UniMod:4)PEC(UniMod:4)ENPETDLHVNPK	4	KFVLC(UniMod:4)PEC(UniMod:4)ENPETDLHVNPK4	34960.7	33222.7	37466.5
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	KFVSDDSICVLGIQK	KFVSDDSIC(UniMod:4)VLGIQK	2	KFVSDDSIC(UniMod:4)VLGIQK2	4521.54	1398.62	2560.98
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	KFVSDDSICVLGIQK	KFVSDDSIC(UniMod:4)VLGIQK	3	KFVSDDSIC(UniMod:4)VLGIQK3	27229.7	30863.6	29048
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	KFVTDSNAVVQLK	KFVTDSNAVVQLK	2	KFVTDSNAVVQLK2	477.451	2565.74	2340.74
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	KFVTDSNAVVQLK	KFVTDSNAVVQLK	3	KFVTDSNAVVQLK3	26355.8	36071.2	30073.5
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	KFVTELK	KFVTELK	2	KFVTELK2	5023.04	6444.76	12080.4
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	KFYDANYDGK	KFYDANYDGK	2	KFYDANYDGK2	25020.6	25651.5	25868.1
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	KFYDANYDGK	KFYDANYDGK	3	KFYDANYDGK3	25149.9	21406.3	20154
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	KFYDVELENLER	KFYDVELENLER	3	KFYDVELENLER3		2157.46	3494.85
P34058	P34058;A0A8I6AUX1	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	KFYEAFSK	KFYEAFSK	2	KFYEAFSK2	129236	154474	124757
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	KFYEQFSK	KFYEQFSK	2	KFYEQFSK2	153748	154284	162838
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	KFYNQVSTPLLR	KFYNQVSTPLLR	2	KFYNQVSTPLLR2	785748	1.16729e+06	957053
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	KFYNQVSTPLLR	KFYNQVSTPLLR	3	KFYNQVSTPLLR3	6.9416e+06	9.99215e+06	9.66917e+06
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	KGAAFGFNVIATR	KGAAFGFNVIATR	3	KGAAFGFNVIATR3	2775.02		1542.27
P50503	P50503	F10A1_RAT	St13	Hsc70-interacting protein	1	KGAAIDALNDGELQK	KGAAIDALNDGELQK	2	KGAAIDALNDGELQK2	4557.75	7410.39	8268.27
P50503	P50503	F10A1_RAT	St13	Hsc70-interacting protein	1	KGAAIDALNDGELQK	KGAAIDALNDGELQK	3	KGAAIDALNDGELQK3	48356.2	58706.2	40841.8
Q05962	Q05962	ADT1_RAT	Slc25a4	ADP/ATP translocase 1	1	KGADIMYTGTVDCWR	KGADIMYTGTVDC(UniMod:4)WR	2	KGADIMYTGTVDC(UniMod:4)WR2	9087.07	6651.04	11243.8
Q05962	Q05962	ADT1_RAT	Slc25a4	ADP/ATP translocase 1	1	KGADIMYTGTVDCWR	KGADIMYTGTVDC(UniMod:4)WR	3	KGADIMYTGTVDC(UniMod:4)WR3	132214	158191	166525
D4ADE8	D4ADE8;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	KGADSLEDFLYHEGYACTSIHGDR	KGADSLEDFLYHEGYAC(UniMod:4)TSIHGDR	4	KGADSLEDFLYHEGYAC(UniMod:4)TSIHGDR4	6402.8	5680.48	3073.01
P52555	P52555	ERP29_RAT	Erp29	Endoplasmic reticulum resident protein 29	1	KGAEKEEL	KGAEKEEL	2	KGAEKEEL2	9903.26	2753.02	10066.9
Q4V8B7	Q4V8B7	HSDL1_RAT	Hsdl1	Inactive hydroxysteroid dehydrogenase-like protein 1	1	KGAIVTVSSGSCCKPTPQLAAFSASK	KGAIVTVSSGSC(UniMod:4)C(UniMod:4)KPTPQLAAFSASK	4	KGAIVTVSSGSC(UniMod:4)C(UniMod:4)KPTPQLAAFSASK4	6587.33	7176.69	10298.3
Q642B4	Q642B4	Q642B4_RAT	Clec14a	C-type lectin domain containing 14A	1	KGALDSQGVECDAEATSLR	KGALDSQGVEC(UniMod:4)DAEATSLR	3	KGALDSQGVEC(UniMod:4)DAEATSLR3	3849.89	4349.04	1375.69
Q5XIM0	Q5XIM0	Q5XIM0_RAT	Bcs1l	Mitochondrial chaperone BCS1	1	KGAQLGLVAFR	KGAQLGLVAFR	3	KGAQLGLVAFR3	6742.06	4047.58	5159.76
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	KGASDTYVTYLIR	KGASDTYVTYLIR	3	KGASDTYVTYLIR3	58154.6	57682.1	63780.1
F1M5M9	F1M287;F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	0	KGASLLLYHR	KGASLLLYHR	3	KGASLLLYHR3	29731.1	40237.7	33769.3
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	KGASLLLYQR	KGASLLLYQR	3	KGASLLLYQR3	10351.6		9461.25
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	KGASSAYLENSK	KGASSAYLENSK	3	KGASSAYLENSK3	4885.49	9305.6	8589
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	KGATPAEDDEDNDIDLFGSDEEEEDKEAAR	KGATPAEDDEDNDIDLFGSDEEEEDKEAAR	4	KGATPAEDDEDNDIDLFGSDEEEEDKEAAR4	6562.47	12466.2	12295.5
P63036	P63036	DNJA1_RAT	Dnaja1	DnaJ homolog subfamily A member 1	1	KGAVECCPNCR	KGAVEC(UniMod:4)C(UniMod:4)PNC(UniMod:4)R	2	KGAVEC(UniMod:4)C(UniMod:4)PNC(UniMod:4)R2			2105.26
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	KGAVPHSSPNLAEVK	KGAVPHSSPNLAEVK	3	KGAVPHSSPNLAEVK3	8410.8	8055.55	4998.64
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	KGAVSPVGVQPILNK	KGAVSPVGVQPILNK	2	KGAVSPVGVQPILNK2	25656.4	10170.1	8539.55
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	KGAVSPVGVQPILNK	KGAVSPVGVQPILNK	3	KGAVSPVGVQPILNK3	491234	399016	362540
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	KGAVSSALYMAWLEALSK	KGAVSSALYMAWLEALSK	3	KGAVSSALYMAWLEALSK3	3464.09	7997.19	2914.26
B5DEJ6	B5DEJ6	B5DEJ6_RAT	Tpk1	Thiamine pyrophosphokinase	1	KGCDLISTPDQDHTDFTK	KGC(UniMod:4)DLISTPDQDHTDFTK	3	KGC(UniMod:4)DLISTPDQDHTDFTK3	2823.34		
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	KGCGYYGNPAWQGFCSK	KGC(UniMod:4)GYYGNPAWQGFC(UniMod:4)SK	3	KGC(UniMod:4)GYYGNPAWQGFC(UniMod:4)SK3	6538.5	17546.3	9573.5
D3ZHR2	D3ZHR2	ABCD1_RAT	Abcd1	ATP-binding cassette sub-family D member 1	1	KGCSEQQLEAILGIVHLR	KGC(UniMod:4)SEQQLEAILGIVHLR	4	KGC(UniMod:4)SEQQLEAILGIVHLR4		2490.64	1197.76
D4A9I3	D4A9I3	FLOWR_RAT	Cacfd1	Calcium channel flower homolog	1	KGDAISYAR	KGDAISYAR	2	KGDAISYAR2	5727.95		2563.43
A0A8I6GKB1	A0A8I6GKB1	A0A8I6GKB1_RAT	Mocs1	Molybdenum cofactor synthesis 1	1	KGDALVVAQLAGVQAAK	KGDALVVAQLAGVQAAK	3	KGDALVVAQLAGVQAAK3	3399.04	4389.4	2684.56
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	KGDDVYVYYK	KGDDVYVYYK	2	KGDDVYVYYK2	2988.78	4478.23	8979.39
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	KGDDVYVYYK	KGDDVYVYYK	3	KGDDVYVYYK3	13760.9	14987.8	11654
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	KGDECELLGHNK	KGDEC(UniMod:4)ELLGHNK	3	KGDEC(UniMod:4)ELLGHNK3	158783	168823	182710
Q66H15	Q66H15	RMD3_RAT	Rmdn3	Regulator of microtubule dynamics protein 3	1	KGDESAASHLWYAVLCGQLAEHEGISK	KGDESAASHLWYAVLC(UniMod:4)GQLAEHEGISK	4	KGDESAASHLWYAVLC(UniMod:4)GQLAEHEGISK4	15623.6	6582.81	4769.83
B2RYW9	B2RYW9	FAHD2_RAT	Fahd2	Fumarylacetoacetate hydrolase domain-containing protein 2	1	KGDEVQCEIEELGVIINK	KGDEVQC(UniMod:4)EIEELGVIINK	3	KGDEVQC(UniMod:4)EIEELGVIINK3	12538.1	6779.82	13435.7
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	KGDEYVINGQK	KGDEYVINGQK	2	KGDEYVINGQK2	2545.65	2859.72	2178.79
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	KGDEYVINGQK	KGDEYVINGQK	3	KGDEYVINGQK3	20831.5	20945.1	27734.4
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	KGDIFLVR	KGDIFLVR	2	KGDIFLVR2	76428.2	68904.8	73087.4
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	KGDILTLLNSTNK	KGDILTLLNSTNK	2	KGDILTLLNSTNK2	21754	20343.9	17148
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	KGDILTLLNSTNK	KGDILTLLNSTNK	3	KGDILTLLNSTNK3	347445	396577	381704
P20280	F1LY43;D3ZZH9;D4A4G9;A0A8I6G7W2;A0A8I6A5T5;A0A8I6AWN1;D3ZM68;D3ZKL4;D3ZQ96;P20280;D3ZPN7;A0A8I5ZVN3;F1LWH4;M0R5R7;D3ZPV5;D3ZPH0;D4A870;D3ZLH3;M0RAP0;D3ZPU6;A0A8I5Y0P1;D3ZEK2	RL21_RAT	Rpl21	Large ribosomal subunit protein eL21	0	KGDIVDIK	KGDIVDIK	2	KGDIVDIK2			8343.36
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	KGDLLLNR	KGDLLLNR	2	KGDLLLNR2	39011.3	43905.3	23075.5
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	KGDMTHELVR	KGDMTHELVR	3	KGDMTHELVR3	15419.7	14511.3	19246.8
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	KGDNHLGYSLVTHIPAGAR	KGDNHLGYSLVTHIPAGAR	3	KGDNHLGYSLVTHIPAGAR3	6462.35	7983.57	5347.05
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	KGDNHLGYSLVTHIPAGAR	KGDNHLGYSLVTHIPAGAR	4	KGDNHLGYSLVTHIPAGAR4	47737.4	56093.3	38775.3
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	KGDNYEMK	KGDNYEMK	2	KGDNYEMK2	6167.71		14624.5
Q9EQG6	Q9EQG6	KDIS_RAT	Kidins220	Kinase D-interacting substrate of 220 kDa	1	KGDTPLHVAIR	KGDTPLHVAIR	3	KGDTPLHVAIR3	4288.48	5286.39	3796.78
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	KGDTWYLVDSR	KGDTWYLVDSR	3	KGDTWYLVDSR3	41420.4	35099.2	28459.5
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	KGDVVIVLTGWRPGSGFTNTMR	KGDVVIVLTGWRPGSGFTNTMR	3	KGDVVIVLTGWRPGSGFTNTMR3	8115.81	10435.4	11165.4
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	KGDVVIVLTGWRPGSGFTNTMR	KGDVVIVLTGWRPGSGFTNTMR	4	KGDVVIVLTGWRPGSGFTNTMR4	70874.8	51878.6	57802.4
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	KGDYLGK	KGDYLGK	2	KGDYLGK2	111459	143947	120198
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	KGEDFVK	KGEDFVK	1	KGEDFVK1	2469.93	450.769	1937.64
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	KGEDFVK	KGEDFVK	2	KGEDFVK2	161436	136556	153831
Q7TP42	Q7TP42	Q7TP42_RAT	Sec62	Translocation protein SEC62	1	KGEEALFTTR	KGEEALFTTR	2	KGEEALFTTR2	13702.6	17353	22885.1
Q7TP42	Q7TP42	Q7TP42_RAT	Sec62	Translocation protein SEC62	1	KGEEALFTTR	KGEEALFTTR	3	KGEEALFTTR3	139916	153248	111204
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	KGEELEEEWGPVEK	KGEELEEEWGPVEK	3	KGEELEEEWGPVEK3	5083.27		4157.67
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	KGEEYFILEESNLPWWR	KGEEYFILEESNLPWWR	3	KGEEYFILEESNLPWWR3	13126.4	10483.3	7317.59
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	KGEFETGFEK	KGEFETGFEK	2	KGEFETGFEK2	31892.9	40121.5	47521.9
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	KGEFETGFEK	KGEFETGFEK	3	KGEFETGFEK3	44960	66640.1	42551.1
Q6TUG0	Q6TUG0	DJB11_RAT	Dnajb11	DnaJ homolog subfamily B member 11	1	KGEGLPNFDNNNIK	KGEGLPNFDNNNIK	2	KGEGLPNFDNNNIK2		5927.83	4665.42
Q6TUG0	Q6TUG0	DJB11_RAT	Dnajb11	DnaJ homolog subfamily B member 11	1	KGEGLPNFDNNNIK	KGEGLPNFDNNNIK	3	KGEGLPNFDNNNIK3	127597	145384	148602
F7EYK0	F7EYK0	F7EYK0_RAT	Fkbp5	peptidylprolyl isomerase	1	KGEICHLLCKPEYAYGSAGSLPK	KGEIC(UniMod:4)HLLC(UniMod:4)KPEYAYGSAGSLPK	4	KGEIC(UniMod:4)HLLC(UniMod:4)KPEYAYGSAGSLPK4	14745.7	8781.13	7000.46
P62944	P52303;P62944;A0A8I6G475;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	KGEIFELK	KGEIFELK	2	KGEIFELK2	103357	89129.3	71458.1
A0A8I6AS17	A0A8I6AS17	A0A8I6AS17_RAT	Bsdc1	BSD domain containing 1	1	KGEISELLVGSPSIR	KGEISELLVGSPSIR	3	KGEISELLVGSPSIR3	81044.9	76878.4	87783.9
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	KGEITGEVR	KGEITGEVR	2	KGEITGEVR2	1.66104e+06	1.64671e+06	1.60623e+06
Q5U2U2	Q5U2U2	CRKL_RAT	Crkl	Crk-like protein	1	KGELLVIIEKPEEQWWSAR	KGELLVIIEKPEEQWWSAR	4	KGELLVIIEKPEEQWWSAR4	1138.5	2528.23	3186.95
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	KGELSIVPR	KGELSIVPR	2	KGELSIVPR2	5808.2	9304.28	10422.9
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	KGEPGPPDCDSPLFLPYK	KGEPGPPDC(UniMod:4)DSPLFLPYK	3	KGEPGPPDC(UniMod:4)DSPLFLPYK3	48555.9	58969.3	60648.7
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	KGEPSEPEVSSEIK	KGEPSEPEVSSEIK	3	KGEPSEPEVSSEIK3	35528.9	37629.3	32335.4
Q76GL9	Q76GL9	Q76GL9_RAT	Slc1a4	Amino acid transporter	1	KGEQELQEVK	KGEQELQEVK	2	KGEQELQEVK2	2472.79	4653.52	2621.86
Q76GL9	Q76GL9	Q76GL9_RAT	Slc1a4	Amino acid transporter	1	KGEQELQEVK	KGEQELQEVK	3	KGEQELQEVK3	20512.4	16140.4	12968.5
Q63186	Q63186	EI2BD_RAT	Eif2b4	Translation initiation factor eIF-2B subunit delta	1	KGEQGGPSPQACPSTAGEATSGVK	KGEQGGPSPQAC(UniMod:4)PSTAGEATSGVK	3	KGEQGGPSPQAC(UniMod:4)PSTAGEATSGVK3	11373.2	13890.7	14648.4
Q9QZG1	Q9QZG1	S22AN_RAT	Slc22a23	Solute carrier family 22 member 23	1	KGEQPLLLTNAELK	KGEQPLLLTNAELK	3	KGEQPLLLTNAELK3	52078	52329.6	38962.9
P83868	P83868	TEBP_RAT	Ptges3	Prostaglandin E synthase 3	1	KGESGQSWPR	KGESGQSWPR	2	KGESGQSWPR2	33151.1	40276.7	44300.2
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	KGESQTDIEITR	KGESQTDIEITR	3	KGESQTDIEITR3	65592.8	68988.1	59637.2
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	KGESQTDIEITREEDFTR	KGESQTDIEITREEDFTR	3	KGESQTDIEITREEDFTR3	17176.9	8196.93	28718.8
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	KGESQTDIEITREEDFTR	KGESQTDIEITREEDFTR	4	KGESQTDIEITREEDFTR4	95243	90056.2	95054.9
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	KGESSVSVDGK	KGESSVSVDGK	2	KGESSVSVDGK2	2751.55		18268.5
O35244	O35244	PRDX6_RAT	Prdx6	Peroxiredoxin-6	1	KGESVMVLPTLPEEEAK	KGESVMVLPTLPEEEAK	2	KGESVMVLPTLPEEEAK2	938.998	4265.4	
O35244	O35244	PRDX6_RAT	Prdx6	Peroxiredoxin-6	1	KGESVMVLPTLPEEEAK	KGESVMVLPTLPEEEAK	3	KGESVMVLPTLPEEEAK3	21333.7	16759.4	15371.1
D3ZII8	D3ZII8	D3ZII8_RAT	Smyd5	Histone-lysine N-trimethyltransferase SMYD5	1	KGETIFIERPLVASQFLWNALYR	KGETIFIERPLVASQFLWNALYR	4	KGETIFIERPLVASQFLWNALYR4	7815	2452.37	8100.26
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	KGEVFLYEIGGNIGER	KGEVFLYEIGGNIGER	3	KGEVFLYEIGGNIGER3	21844.6	10526.9	14284.4
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	KGFDCGLEAK	KGFDC(UniMod:4)GLEAK	2	KGFDC(UniMod:4)GLEAK2		3232.55	
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	KGFGNIATNEDTK	KGFGNIATNEDTK	2	KGFGNIATNEDTK2	456930	409739	400308
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	KGFGNIATNEDTK	KGFGNIATNEDTK	3	KGFGNIATNEDTK3	6.76724e+06	6.83453e+06	7.39926e+06
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	KGFGNIATNEDTKK	KGFGNIATNEDTKK	2	KGFGNIATNEDTKK2	16202.1	16021.5	20386.3
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	KGFIGPGIDVPAPDMSTGER	KGFIGPGIDVPAPDMSTGER	3	KGFIGPGIDVPAPDMSTGER3	131509	110883	140635
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	KGFPVLSK	KGFPVLSK	2	KGFPVLSK2		2610.93	
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	KGFQASHSTECGGQVR	KGFQASHSTEC(UniMod:4)GGQVR	3	KGFQASHSTEC(UniMod:4)GGQVR3	2360.55		2151.92
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	KGFTCVFDLR	KGFTC(UniMod:4)VFDLR	3	KGFTC(UniMod:4)VFDLR3	4481.67	4034.95	5940.84
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	KGFTEVK	KGFTEVK	2	KGFTEVK2	466145	425889	413357
Q6P7D4	Q6P7D4	CP20A_RAT	Cyp20a1	Cytochrome P450 20A1	1	KGGDFSQHTFIDSLVQR	KGGDFSQHTFIDSLVQR	3	KGGDFSQHTFIDSLVQR3	7138.87	4850.23	12033.7
Q6P7D4	Q6P7D4	CP20A_RAT	Cyp20a1	Cytochrome P450 20A1	1	KGGDFSQHTFIDSLVQR	KGGDFSQHTFIDSLVQR	4	KGGDFSQHTFIDSLVQR4	21145.2	24968.9	37694.7
A0JPJ7	A0JPJ7	OLA1_RAT	Ola1	Obg-like ATPase 1	1	KGGDGLKPPPIIGR	KGGDGLKPPPIIGR	3	KGGDGLKPPPIIGR3	16940.2	15720.9	8613.42
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	KGGEIEILTNTDNQGIK	KGGEIEILTNTDNQGIK	3	KGGEIEILTNTDNQGIK3	19768.3	17502.9	20213.7
A0A0G2JUU7	A0A0G2JUU7	A0A0G2JUU7_RAT	Tubgcp3	Gamma-tubulin complex component	1	KGGELASAVHAYTK	KGGELASAVHAYTK	3	KGGELASAVHAYTK3	3489.59	4152.25	
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	KGGETSEMYLIQPDTSSK	KGGETSEMYLIQPDTSSK	3	KGGETSEMYLIQPDTSSK3	4.91265e+06	4.2206e+06	4.84861e+06
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	KGGETSEMYLIQPDTSSKPYR	KGGETSEMYLIQPDTSSKPYR	3	KGGETSEMYLIQPDTSSKPYR3	2.54569e+06	2.53514e+06	2.56517e+06
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	KGGETSEMYLIQPDTSSKPYR	KGGETSEMYLIQPDTSSKPYR	4	KGGETSEMYLIQPDTSSKPYR4	1.11711e+07	1.17481e+07	1.19915e+07
Q62885	Q62885	U119A_RAT	Unc119	Protein unc-119 homolog A	1	KGGGGTGPGAEPVPGASNR	KGGGGTGPGAEPVPGASNR	3	KGGGGTGPGAEPVPGASNR3	6808.29	12506.1	9525.79
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	KGGLIGLAACSIALGK	KGGLIGLAAC(UniMod:4)SIALGK	3	KGGLIGLAAC(UniMod:4)SIALGK3	2291.67	4870.79	5232.62
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	KGGVASGFK	KGGVASGFK	1	KGGVASGFK1	2322.9		
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	KGGVASGFK	KGGVASGFK	2	KGGVASGFK2	495865	281463	519764
P62268	F1LTW8;D4A9Q3;P62268	RS23_RAT	Rps23	Small ribosomal subunit protein uS12	0	KGHAVGDIPGVR	KGHAVGDIPGVR	3	KGHAVGDIPGVR3	7969.2	15025.4	9894.73
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	KGHFTSLELVPPSTLTTTHLK	KGHFTSLELVPPSTLTTTHLK	4	KGHFTSLELVPPSTLTTTHLK4	1678.48	6012.41	2991.73
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	KGHQFSCVCLHGDR	KGHQFSC(UniMod:4)VC(UniMod:4)LHGDR	4	KGHQFSC(UniMod:4)VC(UniMod:4)LHGDR4	3653.19	9755.18	8887.9
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	KGHQLQLDYFGACK	KGHQLQLDYFGAC(UniMod:4)K	2	KGHQLQLDYFGAC(UniMod:4)K2	3541.78	2264	9167.46
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	KGHQLQLDYFGACK	KGHQLQLDYFGAC(UniMod:4)K	3	KGHQLQLDYFGAC(UniMod:4)K3	73833	78993.1	77792.8
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	KGHQLQLDYFGACK	KGHQLQLDYFGAC(UniMod:4)K	4	KGHQLQLDYFGAC(UniMod:4)K4	115875	143701	130362
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	KGHVLFRPTVSQQQSCPTCSTSLLNGDFK	KGHVLFRPTVSQQQSC(UniMod:4)PTC(UniMod:4)STSLLNGDFK	4	KGHVLFRPTVSQQQSC(UniMod:4)PTC(UniMod:4)STSLLNGDFK4	1.83786e+06	2.45253e+06	2.02636e+06
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	KGHVSFK	KGHVSFK	1	KGHVSFK1			18523.4
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	KGHVSFK	KGHVSFK	2	KGHVSFK2			436728
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	KGHVSFKPSLDQQR	KGHVSFKPSLDQQR	2	KGHVSFKPSLDQQR2	972224	1.0493e+06	810946
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	KGHVSFKPSLDQQR	KGHVSFKPSLDQQR	3	KGHVSFKPSLDQQR3	67530.8	19354.7	20145
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	KGHVSFKPSLDQQR	KGHVSFKPSLDQQR	4	KGHVSFKPSLDQQR4	388817	136939	270115
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	KGHVTWSLHGPENATPVSDSPDNHSQTLK	KGHVTWSLHGPENATPVSDSPDNHSQTLK	4	KGHVTWSLHGPENATPVSDSPDNHSQTLK4	15226.3	15821.1	10512.9
P54001	P54001	P4HA1_RAT	P4ha1	Prolyl 4-hydroxylase subunit alpha-1	1	KGIAVDYLPER	KGIAVDYLPER	3	KGIAVDYLPER3	17048.7	9179.54	
Q6AY41	Q6AY41	CC50A_RAT	Tmem30a	Cell cycle control protein 50A	1	KGIAWWTDK	KGIAWWTDK	2	KGIAWWTDK2	18885.4	22825.5	10918.1
P01026	P01026	CO3_RAT	C3	Complement C3	1	KGICVADPYEITVMQDFFIDLR	KGIC(UniMod:4)VADPYEITVMQDFFIDLR	3	KGIC(UniMod:4)VADPYEITVMQDFFIDLR3	11221.5	3489.24	4737.69
A0A8I5ZP70	A0A8I5ZP70	A0A8I5ZP70_RAT	Tom1l2	Target of myb1 like 2 membrane trafficking protein	1	KGIEFPMADLDALSPIHTPQR	KGIEFPMADLDALSPIHTPQR	3	KGIEFPMADLDALSPIHTPQR3	2943.42	6384.27	
A0A8I5ZP70	A0A8I5ZP70	A0A8I5ZP70_RAT	Tom1l2	Target of myb1 like 2 membrane trafficking protein	1	KGIEFPMADLDALSPIHTPQR	KGIEFPMADLDALSPIHTPQR	4	KGIEFPMADLDALSPIHTPQR4	20691.8	23140.7	17226.7
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	KGIELIPQVR	KGIELIPQVR	3	KGIELIPQVR3	21156.3	20518.7	15278.9
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	KGIHDADAEAR	KGIHDADAEAR	3	KGIHDADAEAR3			6876.39
D3ZSY8	D3ZSY8	D3ZSY8_RAT	Tbc1d10b	TBC1 domain family, member 10b	1	KGIPSSLR	KGIPSSLR	2	KGIPSSLR2	28257.6	27300.1	26027.4
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	KGIQEAQVQLQK	KGIQEAQVQLQK	3	KGIQEAQVQLQK3	6706.36	2067.77	4930.01
P97694	P97694	CYH1_RAT	Cyth1	Cytohesin-1	1	KGIQFLIENGLLK	KGIQFLIENGLLK	3	KGIQFLIENGLLK3	8514.49	8124.91	6183.32
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	KGISDQVLK	KGISDQVLK	2	KGISDQVLK2	11532.1	7393.53	8546.79
P63102	P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	1	KGIVDQSQQAYQEAFEISK	KGIVDQSQQAYQEAFEISK	3	KGIVDQSQQAYQEAFEISK3	3.0851e+06	3.35601e+06	3.25779e+06
P63102	P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	1	KGIVDQSQQAYQEAFEISKK	KGIVDQSQQAYQEAFEISKK	3	KGIVDQSQQAYQEAFEISKK3	29497.1	41796.4	49236.7
P63102	P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	1	KGIVDQSQQAYQEAFEISKK	KGIVDQSQQAYQEAFEISKK	4	KGIVDQSQQAYQEAFEISKK4	281664	410099	478198
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	KGIVNEQFLLQR	KGIVNEQFLLQR	3	KGIVNEQFLLQR3	7512.22	1170.52	4619.3
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	KGIWLEAGK	KGIWLEAGK	2	KGIWLEAGK2	100681	100887	96647.3
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	KGIYEIYSLALVTWR	KGIYEIYSLALVTWR	3	KGIYEIYSLALVTWR3	3578.86	5916.81	4819.18
P98087	P98087	CBLN2_RAT	Cbln2	Cerebellin-2	1	KGIYSFSFHVVK	KGIYSFSFHVVK	3	KGIYSFSFHVVK3	18677.3	7169.51	9752.12
P0CE43	P0CE43	GRB10_RAT	Grb10	Growth factor receptor-bound protein 10	1	KGLAPPFNAPMR	KGLAPPFNAPMR	3	KGLAPPFNAPMR3	18479.2	14762.3	20256.2
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	KGLASPTAITPISSPLCSK	KGLASPTAITPISSPLC(UniMod:4)SK	3	KGLASPTAITPISSPLC(UniMod:4)SK3	26517.7	24619	19108.1
A0A8I6A6W3	A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	1	KGLAYCETHYNQLFGDVCFHCNR	KGLAYC(UniMod:4)ETHYNQLFGDVC(UniMod:4)FHC(UniMod:4)NR	3	KGLAYC(UniMod:4)ETHYNQLFGDVC(UniMod:4)FHC(UniMod:4)NR3	1658.69	3608.82	2981.49
A0A8I6A6W3	A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	1	KGLAYCETHYNQLFGDVCFHCNR	KGLAYC(UniMod:4)ETHYNQLFGDVC(UniMod:4)FHC(UniMod:4)NR	4	KGLAYC(UniMod:4)ETHYNQLFGDVC(UniMod:4)FHC(UniMod:4)NR4	23270.3	17667.5	29112.9
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	KGLDNLYK	KGLDNLYK	2	KGLDNLYK2	6944.78	5871.59	11267.8
Q7TSU1	D4A631;Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	0	KGLECLVSILK	KGLEC(UniMod:4)LVSILK	3	KGLEC(UniMod:4)LVSILK3	13938.5	10902.5	11801.5
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	KGLEELLIGGSHLK	KGLEELLIGGSHLK	3	KGLEELLIGGSHLK3	16926.2	28882.6	20807.1
F7EYC4	F7EYC4	F7EYC4_RAT	Tom1	Target of myb1 membrane trafficking protein	1	KGLEFPMTDLDMLSPIHTPQR	KGLEFPMTDLDMLSPIHTPQR	3	KGLEFPMTDLDMLSPIHTPQR3		6974.85	
F7EYC4	F7EYC4	F7EYC4_RAT	Tom1	Target of myb1 membrane trafficking protein	1	KGLEFPMTDLDMLSPIHTPQR	KGLEFPMTDLDMLSPIHTPQR	4	KGLEFPMTDLDMLSPIHTPQR4	26942.6	25226.1	14913.8
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	KGLELQVMQLQQEK	KGLELQVMQLQQEK	3	KGLELQVMQLQQEK3	28613.3	24616.4	33511.5
A0A8I6A6C3	A0A8I6A938;A0A8I6A6C3	A0A8I6A6C3_RAT	ENSRNOG00000067603	Ig-like domain-containing protein	0	KGLEWIALIYYDSSNK	KGLEWIALIYYDSSNK	3	KGLEWIALIYYDSSNK3	59938.7	70683.7	76365.2
Q5U2U2	Q5U2U2	CRKL_RAT	Crkl	Crk-like protein	1	KGLFPFTHVK	KGLFPFTHVK	3	KGLFPFTHVK3	5965.39	4979.71	6593.54
Q0D2L6	Q0D2L6;B2RZ38	Q0D2L6_RAT	Rragc	Ras-related GTP-binding protein	0	KGLIDYNFHCFR	KGLIDYNFHC(UniMod:4)FR	3	KGLIDYNFHC(UniMod:4)FR3	14116.8	7329.61	10548
Q0D2L6	Q0D2L6;B2RZ38	Q0D2L6_RAT	Rragc	Ras-related GTP-binding protein	0	KGLIDYNFHCFR	KGLIDYNFHC(UniMod:4)FR	4	KGLIDYNFHC(UniMod:4)FR4	5241.93	3995.52	6151.56
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	KGLISSDGFCR	KGLISSDGFC(UniMod:4)R	3	KGLISSDGFC(UniMod:4)R3	3576.54	6275.11	2564.43
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	KGLMYPYIFHVLTK	KGLMYPYIFHVLTK	3	KGLMYPYIFHVLTK3	1553.48	4139.45	5359.7
A0A8I6AS17	A0A8I6AS17	A0A8I6AS17_RAT	Bsdc1	BSD domain containing 1	1	KGLSDFLGVISDTFAPSPDK	KGLSDFLGVISDTFAPSPDK	3	KGLSDFLGVISDTFAPSPDK3	14250.9	11352.8	10678.8
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	KGLSSILDPAR	KGLSSILDPAR	3	KGLSSILDPAR3	13305.2	14304.4	16420
P62278	P62278;M0RCY2	RS13_RAT	Rps13	Small ribosomal subunit protein uS15	0	KGLTPSQIGVILR	KGLTPSQIGVILR	3	KGLTPSQIGVILR3	48645.4	43011.8	41725.1
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	KGLVNDLAR	KGLVNDLAR	2	KGLVNDLAR2	10068.3	5149.97	7801.17
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	KGLVYIFNGR	KGLVYIFNGR	2	KGLVYIFNGR2	28461.3	17765	13271.6
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	KGLVYIFNGR	KGLVYIFNGR	3	KGLVYIFNGR3	205359	189577	208414
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	KGMFEPYLK	KGMFEPYLK	2	KGMFEPYLK2	11566.1	12628.1	10992.2
P11240	P11240	COX5A_RAT	Cox5a	Cytochrome c oxidase subunit 5A, mitochondrial	1	KGMNTLVGYDLVPEPK	KGMNTLVGYDLVPEPK	3	KGMNTLVGYDLVPEPK3	10387.4	11925.6	15513.6
P13832	P13832;P18666	MRLCA_RAT	Rlc-a	Myosin regulatory light chain RLC-A	0	KGNFNYIEFTR	KGNFNYIEFTR	2	KGNFNYIEFTR2	192838	213815	222728
P13832	P13832;P18666	MRLCA_RAT	Rlc-a	Myosin regulatory light chain RLC-A	0	KGNFNYIEFTR	KGNFNYIEFTR	3	KGNFNYIEFTR3	4.11494e+06	4.75914e+06	4.97373e+06
Q64122	Q64122	MYL9_RAT	Myl9	Myosin regulatory light polypeptide 9	1	KGNFNYVEFTR	KGNFNYVEFTR	2	KGNFNYVEFTR2	349718	393125	452839
Q64122	Q64122	MYL9_RAT	Myl9	Myosin regulatory light polypeptide 9	1	KGNFNYVEFTR	KGNFNYVEFTR	3	KGNFNYVEFTR3	3.45722e+06	4.3187e+06	4.33605e+06
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	KGNHILASGSVR	KGNHILASGSVR	3	KGNHILASGSVR3	12622.2	11392.5	10326.7
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	KGNKEPNPMVQLSVQDVTQESK	KGNKEPNPMVQLSVQDVTQESK	3	KGNKEPNPMVQLSVQDVTQESK3	8922.75	11842.8	5310.24
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	KGNKEPNPMVQLSVQDVTQESK	KGNKEPNPMVQLSVQDVTQESK	4	KGNKEPNPMVQLSVQDVTQESK4	44859.1	30642.7	30421.7
D3ZEJ2	D3ZEJ2	D3ZEJ2_RAT	Mcur1	Mitochondrial calcium uniporter regulator 1	1	KGNLPTSVSR	KGNLPTSVSR	2	KGNLPTSVSR2			4985.34
Q06486	Q06486;Q9JJ76	KC1D_RAT	Csnk1d	Casein kinase I isoform delta	0	KGNLVYIIDFGLAK	KGNLVYIIDFGLAK	3	KGNLVYIIDFGLAK3	4455.57	6926.27	7696.63
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	KGNTALHIAALAGQDEVVR	KGNTALHIAALAGQDEVVR	3	KGNTALHIAALAGQDEVVR3	2817.25		2132.72
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	KGNTINEADIPPPVASGK	KGNTINEADIPPPVASGK	3	KGNTINEADIPPPVASGK3	12887.7	20503.6	26238.6
B2GV55	B2GV55	B2GV55_RAT	Ube2q1	Ubiquitin conjugating enzyme E2 Q1	1	KGNTLLLQHLK	KGNTLLLQHLK	3	KGNTLLLQHLK3	12561.5	13438.2	9154.6
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	KGPAEDMSSK	KGPAEDMSSK	2	KGPAEDMSSK2			8101.41
Q6P780	Q6P780	Q6P780_RAT	Nfkbie	NFKB inhibitor epsilon	1	KGPDEADDSQCDSGIESLR	KGPDEADDSQC(UniMod:4)DSGIESLR	3	KGPDEADDSQC(UniMod:4)DSGIESLR3	4249	5096.25	4382.73
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	KGPEADSEWR	KGPEADSEWR	2	KGPEADSEWR2	3294.63	5682.85	7259.37
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	KGPEADSEWR	KGPEADSEWR	3	KGPEADSEWR3	11881.2	13271.5	13791.1
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	KGPEDTAQLAHAVLAK	KGPEDTAQLAHAVLAK	2	KGPEDTAQLAHAVLAK2	5033.15		
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	KGPEDTAQLAHAVLAK	KGPEDTAQLAHAVLAK	3	KGPEDTAQLAHAVLAK3	106388	109024	123978
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	KGPEDTAQLAHAVLAK	KGPEDTAQLAHAVLAK	4	KGPEDTAQLAHAVLAK4	31129.8	30099.1	32067.2
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	KGPEGLGFTVVTR	KGPEGLGFTVVTR	3	KGPEGLGFTVVTR3	3806.09	3640.31	4190.77
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	KGPGAASALDDSR	KGPGAASALDDSR	3	KGPGAASALDDSR3	11240	15871.5	12188.7
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	KGPGAASALDDSRR	KGPGAASALDDSRR	3	KGPGAASALDDSRR3	28226.9	23759.9	19364.3
P28064	P28064	PSB8_RAT	Psmb8	Proteasome subunit beta type-8	1	KGPGLYYVDDNGTR	KGPGLYYVDDNGTR	2	KGPGLYYVDDNGTR2	57096.2	60140	47514.4
P28064	P28064	PSB8_RAT	Psmb8	Proteasome subunit beta type-8	1	KGPGLYYVDDNGTR	KGPGLYYVDDNGTR	3	KGPGLYYVDDNGTR3	1.53621e+06	1.63627e+06	1.90698e+06
P28064	P28064	PSB8_RAT	Psmb8	Proteasome subunit beta type-8	1	KGPGLYYVDDNGTR	KGPGLYYVDDNGTR	4	KGPGLYYVDDNGTR4	37862.9	31367.2	43117.5
Q04940	Q04940	NEUG_RAT	Nrgn	Neurogranin	1	KGPGPGGPGGAGGAR	KGPGPGGPGGAGGAR	2	KGPGPGGPGGAGGAR2			6752.02
Q04940	Q04940	NEUG_RAT	Nrgn	Neurogranin	1	KGPGPGGPGGAGGAR	KGPGPGGPGGAGGAR	3	KGPGPGGPGGAGGAR3			11236.9
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	KGPNGYGFNLHSDK	KGPNGYGFNLHSDK	3	KGPNGYGFNLHSDK3	7247.03	7826.92	9874.97
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	KGPNGYGFNLHSDK	KGPNGYGFNLHSDK	4	KGPNGYGFNLHSDK4	23276.7	24282.8	28116.2
P03889	P03889	NU1M_RAT	Mtnd1	NADH-ubiquinone oxidoreductase chain 1	1	KGPNIVGPYGILQPFADAMK	KGPNIVGPYGILQPFADAMK	3	KGPNIVGPYGILQPFADAMK3	22990.8	15747.3	23822.4
A0A8I5ZMX2	A0A8I5ZMX2	A0A8I5ZMX2_RAT	Adamts3	ADAM metallopeptidase with thrombospondin type 1, motif 3	1	KGPPLDGTECAAGK	KGPPLDGTEC(UniMod:4)AAGK	3	KGPPLDGTEC(UniMod:4)AAGK3	4359.23	3691.98	5707.45
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	KGPPLGGGEGETESADTMPFVMLTR	KGPPLGGGEGETESADTMPFVMLTR	3	KGPPLGGGEGETESADTMPFVMLTR3	16005.6	27703.9	27588
D3ZHW0	D3ZHW0	D3ZHW0_RAT	Dhx29	ATP-dependent RNA helicase DHX29	1	KGPQALSFQDIALLK	KGPQALSFQDIALLK	3	KGPQALSFQDIALLK3	3548.16	7337.92	2321.38
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	KGPSTVTDLEETK	KGPSTVTDLEETK	2	KGPSTVTDLEETK2	740.088	2024.01	911.52
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	KGPSTVTDLEETK	KGPSTVTDLEETK	3	KGPSTVTDLEETK3	16952.7	19703.5	23420.3
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	KGPSTVTDLEETKR	KGPSTVTDLEETKR	3	KGPSTVTDLEETKR3	3572.67	17049.8	9627.27
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	KGPSTVTDLEETKR	KGPSTVTDLEETKR	4	KGPSTVTDLEETKR4	6734.31	11365.3	8627.69
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	KGQAVDYDGSR	KGQAVDYDGSR	2	KGQAVDYDGSR2	64697	85011.2	35171.8
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	KGQAVDYDGSR	KGQAVDYDGSR	3	KGQAVDYDGSR3	225980	300448	216506
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	KGQCCPYCLEDTIPK	KGQC(UniMod:4)C(UniMod:4)PYC(UniMod:4)LEDTIPK	3	KGQC(UniMod:4)C(UniMod:4)PYC(UniMod:4)LEDTIPK3	10471.9	16644.6	10365.4
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	KGQEDGGAGDGVEGPVQEVLDLLR	KGQEDGGAGDGVEGPVQEVLDLLR	3	KGQEDGGAGDGVEGPVQEVLDLLR3	4972.9	7723.74	6830.01
Q9EPX4	Q9EPX4	P2Y12_RAT	P2ry12	P2Y purinoceptor 12	1	KGQEGGDPSEETPM	KGQEGGDPSEETPM	2	KGQEGGDPSEETPM2	91394.4	71930.6	102245
P70541	P70541	EI2BG_RAT	Eif2b3	Translation initiation factor eIF-2B subunit gamma	1	KGQESTEPVPGQK	KGQESTEPVPGQK	2	KGQESTEPVPGQK2	11404.3		10291
P70541	P70541	EI2BG_RAT	Eif2b3	Translation initiation factor eIF-2B subunit gamma	1	KGQESTEPVPGQK	KGQESTEPVPGQK	3	KGQESTEPVPGQK3	11880		13395.9
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	KGQEVCVK	KGQEVC(UniMod:4)VK	2	KGQEVC(UniMod:4)VK2			17081.5
B5DEP5	B5DEP5	B5DEP5_RAT	Trip4	Thyroid hormone receptor interactor 4	1	KGQFIEDLITK	KGQFIEDLITK	3	KGQFIEDLITK3	13852	16183.9	13188.6
P29314	M0RB65;D3ZV50;P29314	RS9_RAT	Rps9	Small ribosomal subunit protein uS4	0	KGQGGAGAGDDEEED	KGQGGAGAGDDEEED	2	KGQGGAGAGDDEEED2			3949.39
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	KGQGRPDWAIFGR	KGQGRPDWAIFGR	3	KGQGRPDWAIFGR3	24612.6	20196.9	16547.9
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	KGQLNADEISLRPAQSFLMNK	KGQLNADEISLRPAQSFLMNK	3	KGQLNADEISLRPAQSFLMNK3	6051.72	7657.14	6850.06
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	KGQLNADEISLRPAQSFLMNK	KGQLNADEISLRPAQSFLMNK	4	KGQLNADEISLRPAQSFLMNK4	28824.3	36371.3	43416.6
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	KGQTPGGAQFVGLELYK	KGQTPGGAQFVGLELYK	3	KGQTPGGAQFVGLELYK3	15480.7	22972.8	13779
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	KGQVPLTFNIK	KGQVPLTFNIK	3	KGQVPLTFNIK3	26993.8	22830.2	14442.7
Q5PPL3	Q5PPL3	NSDHL_RAT	Nsdhl	Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating	1	KGQVTGTDLINEVSK	KGQVTGTDLINEVSK	3	KGQVTGTDLINEVSK3	25097.9	18642.3	25702.2
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	KGQYDGQEAQNDAMILYDK	KGQYDGQEAQNDAMILYDK	3	KGQYDGQEAQNDAMILYDK3	734.702		3315.68
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	KGSDEVTASSAATGTSPR	KGSDEVTASSAATGTSPR	3	KGSDEVTASSAATGTSPR3	34799.2	32343.1	27067.4
O35763	O35763	MOES_RAT	Msn	Moesin	1	KGSELWLGVDALGLNIYEQNDR	KGSELWLGVDALGLNIYEQNDR	3	KGSELWLGVDALGLNIYEQNDR3	10890.6	8699.68	5497.24
P27791	P27791	KAPCA_RAT	Prkaca	cAMP-dependent protein kinase catalytic subunit alpha	1	KGSEQESVKEFLAK	KGSEQESVKEFLAK	3	KGSEQESVKEFLAK3	11281.6	10406.5	12014.3
P68182	P68182	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	1	KGSEVESVK	KGSEVESVK	2	KGSEVESVK2			46816.2
P68182	P68182	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	1	KGSEVESVKEFLAK	KGSEVESVKEFLAK	3	KGSEVESVKEFLAK3	5813.25	7562.38	6387.48
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	KGSFGLPGQGDFLR	KGSFGLPGQGDFLR	3	KGSFGLPGQGDFLR3	6986.69	9241.6	
Q641X3	Q641X3	HEXA_RAT	Hexa	Beta-hexosaminidase subunit alpha	1	KGSFNPVTHIYTAQDVK	KGSFNPVTHIYTAQDVK	3	KGSFNPVTHIYTAQDVK3	11542.4	15206.8	7647.75
Q641X3	Q641X3	HEXA_RAT	Hexa	Beta-hexosaminidase subunit alpha	1	KGSFNPVTHIYTAQDVK	KGSFNPVTHIYTAQDVK	4	KGSFNPVTHIYTAQDVK4	6401.69	5153.26	6238.77
P15943	P15943	APLP2_RAT	Aplp2	Amyloid beta precursor like protein 2	1	KGSGMAEQDGGLIGAEEK	KGSGMAEQDGGLIGAEEK	3	KGSGMAEQDGGLIGAEEK3	6705.55	5759.21	
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	KGSIDVEK	KGSIDVEK	2	KGSIDVEK2	28827.8	27788.1	32486
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	KGSLLADGR	KGSLLADGR	2	KGSLLADGR2	590829	361462	337745
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	KGSLTPGYMFK	KGSLTPGYMFK	2	KGSLTPGYMFK2		15568.9	14694
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	KGSLTPGYMFK	KGSLTPGYMFK	3	KGSLTPGYMFK3	45554.9	53386.2	59931.6
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	KGSLYTWTPPSTPSFR	KGSLYTWTPPSTPSFR	3	KGSLYTWTPPSTPSFR3	33082	35490.1	33811.9
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	KGSMTMSSPWITPQLQDK	KGSMTMSSPWITPQLQDK	3	KGSMTMSSPWITPQLQDK3	15307.2	10670.9	10914.3
Q8K4Y7	Q8K4Y7	CANT1_RAT	Cant1	Soluble calcium-activated nucleotidase 1	1	KGSNLLLSAAQDFR	KGSNLLLSAAQDFR	3	KGSNLLLSAAQDFR3	3741.16	3328.73	
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	KGSPDQPLALPLPEQVQEQVQEQVQPK	KGSPDQPLALPLPEQVQEQVQEQVQPK	4	KGSPDQPLALPLPEQVQEQVQEQVQPK4	94313.6	76984.6	88401.8
Q03555	Q03555	GEPH_RAT	Gphn	Gephyrin	1	KGSQECFQFILPALPHAIDLLR	KGSQEC(UniMod:4)FQFILPALPHAIDLLR	4	KGSQEC(UniMod:4)FQFILPALPHAIDLLR4	3850.72	3651.76	1034
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	KGSSETPATDVFSSTEEGEK	KGSSETPATDVFSSTEEGEK	3	KGSSETPATDVFSSTEEGEK3	3763.17	8271.64	9167.63
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	KGSSETPATDVFSSTEEGEKR	KGSSETPATDVFSSTEEGEKR	3	KGSSETPATDVFSSTEEGEKR3	2026.4	758.025	
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	KGSSETPATDVFSSTEEGEKR	KGSSETPATDVFSSTEEGEKR	4	KGSSETPATDVFSSTEEGEKR4	13051.2	4115.77	5381.89
P48004	P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	1	KGSTAVGVR	KGSTAVGVR	2	KGSTAVGVR2			88358.5
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	KGSVFNTWK	KGSVFNTWK	2	KGSVFNTWK2	64932.2	97557.9	121294
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	KGSVFNTWKPMWVVLLEDGIEFYK	KGSVFNTWKPMWVVLLEDGIEFYK	4	KGSVFNTWKPMWVVLLEDGIEFYK4		7811.71	6205.07
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	KGSYNNIVVHVK	KGSYNNIVVHVK	3	KGSYNNIVVHVK3	15042.9	19029.1	9738.87
A0A8I6ASK1	A0A8I6ASK1	A0A8I6ASK1_RAT	P4ha2	procollagen-proline 4-dioxygenase	1	KGTAVFWYNLLR	KGTAVFWYNLLR	3	KGTAVFWYNLLR3	14505.8	11400.3	16654.3
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	KGTDFQLNQLQGK	KGTDFQLNQLQGK	2	KGTDFQLNQLQGK2	138989	144044	129986
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	KGTDFQLNQLQGK	KGTDFQLNQLQGK	3	KGTDFQLNQLQGK3	2.15274e+06	2.06459e+06	2.22289e+06
Q09073	A0A8I6A075;Q09073	ADT2_RAT	Slc25a5	ADP/ATP translocase 2	0	KGTDIMYTGTLDCWR	KGTDIMYTGTLDC(UniMod:4)WR	2	KGTDIMYTGTLDC(UniMod:4)WR2	42196.4	54749	43485.2
Q09073	A0A8I6A075;Q09073	ADT2_RAT	Slc25a5	ADP/ATP translocase 2	0	KGTDIMYTGTLDCWR	KGTDIMYTGTLDC(UniMod:4)WR	3	KGTDIMYTGTLDC(UniMod:4)WR3	67984.5	82930.2	88116.6
Q09073	A0A8I6A075;Q09073	ADT2_RAT	Slc25a5	ADP/ATP translocase 2	0	KGTDIMYTGTLDCWRK	KGTDIMYTGTLDC(UniMod:4)WRK	4	KGTDIMYTGTLDC(UniMod:4)WRK4	4163.29	6612.78	3334.79
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	KGTEELYAIK	KGTEELYAIK	2	KGTEELYAIK2	20478.4	29813.7	22200.5
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	KGTEELYAIK	KGTEELYAIK	3	KGTEELYAIK3	108570	102179	116744
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	KGTEGVLGLQR	KGTEGVLGLQR	2	KGTEGVLGLQR2	2817.97	1613.67	4108.62
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	KGTEGVLGLQR	KGTEGVLGLQR	3	KGTEGVLGLQR3	114891	105321	109753
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	KGTELLLQQER	KGTELLLQQER	3	KGTELLLQQER3	19032.5	13860.4	24673.6
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	KGTEVQVDDIKR	KGTEVQVDDIKR	3	KGTEVQVDDIKR3	28550.2	22154.5	24018.9
Q9JIH7	Q9JIH7;A0A8I6AC38	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	0	KGTFTDDLHK	KGTFTDDLHK	3	KGTFTDDLHK3	8740.23	8856.33	4142.2
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KGTGDCSDEEVDGK	KGTGDC(UniMod:4)SDEEVDGK	2	KGTGDC(UniMod:4)SDEEVDGK2			9561.46
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KGTGDCSDEEVDGK	KGTGDC(UniMod:4)SDEEVDGK	3	KGTGDC(UniMod:4)SDEEVDGK3			33989.4
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	KGTGFQLNQLQGK	KGTGFQLNQLQGK	2	KGTGFQLNQLQGK2	2512.57	3829.19	
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	KGTGFQLNQLQGK	KGTGFQLNQLQGK	3	KGTGFQLNQLQGK3	81543.7	89832.2	58442.6
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	KGTKPPSPYAILTVGETSHK	KGTKPPSPYAILTVGETSHK	4	KGTKPPSPYAILTVGETSHK4		52181	44929.3
P20909	P20909	COBA1_RAT	Col11a1	Collagen alpha-1(XI) chain	1	KGTQAFLLSLYNEHGIQQLGVEVGR	KGTQAFLLSLYNEHGIQQLGVEVGR	4	KGTQAFLLSLYNEHGIQQLGVEVGR4	17990.5	30132.3	12942
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	KGTQLCQDLMGNFFCLCK	KGTQLC(UniMod:4)QDLMGNFFC(UniMod:4)LC(UniMod:4)K	3	KGTQLC(UniMod:4)QDLMGNFFC(UniMod:4)LC(UniMod:4)K3	60369.1	51570	46173.4
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	KGTSPGSELPPPK	KGTSPGSELPPPK	3	KGTSPGSELPPPK3	9366.59	10567.2	12164.7
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	KGTVACGEPPAVEHAR	KGTVAC(UniMod:4)GEPPAVEHAR	4	KGTVAC(UniMod:4)GEPPAVEHAR4	4059.64		11884.9
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	KGTVACGQPPVVENAK	KGTVAC(UniMod:4)GQPPVVENAK	3	KGTVAC(UniMod:4)GQPPVVENAK3	25588	15189.1	20710.4
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	KGTVATEMSTER	KGTVATEMSTER	2	KGTVATEMSTER2	80869.8	76995.4	86393.8
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	KGTVATEMSTER	KGTVATEMSTER	3	KGTVATEMSTER3	1.67668e+06	2.09442e+06	2.22253e+06
P22734	P22734	COMT_RAT	Comt	Catechol O-methyltransferase	1	KGTVLLADNVIVPGTPDFLAYVR	KGTVLLADNVIVPGTPDFLAYVR	3	KGTVLLADNVIVPGTPDFLAYVR3	5068.01	11036.9	4578.54
P80254	P80254	DOPD_RAT	Ddt	D-dopachrome decarboxylase	1	KGTVMTFL	KGTVMTFL	2	KGTVMTFL2	10688.5		8720.51
P24473	P24473	GSTK1_RAT	Gstk1	Glutathione S-transferase kappa 1	1	KGTVNAMR	KGTVNAMR	2	KGTVNAMR2			13801.4
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	KGTVVAEK	KGTVVAEK	1	KGTVVAEK1			5191.3
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	KGTVVAEK	KGTVVAEK	2	KGTVVAEK2			37315.1
P47942	P47942	DPYL2_RAT	Dpysl2	Dihydropyrimidinase-related protein 2	1	KGTVVYGEPITASLGTDGSHYWSK	KGTVVYGEPITASLGTDGSHYWSK	3	KGTVVYGEPITASLGTDGSHYWSK3	2067.95	3938.28	
P47942	P47942	DPYL2_RAT	Dpysl2	Dihydropyrimidinase-related protein 2	1	KGTVVYGEPITASLGTDGSHYWSK	KGTVVYGEPITASLGTDGSHYWSK	4	KGTVVYGEPITASLGTDGSHYWSK4	6544.52	14775.8	9962.09
Q8R478	Q8R478	WBP2_RAT	Wbp2	WW domain-binding protein 2	1	KGTVYLTPYR	KGTVYLTPYR	3	KGTVYLTPYR3	19960.4	23985.9	18763.8
Q6P3V8	Q6P3V8	Q6P3V8_RAT	Eif4a1	ATP-dependent RNA helicase	1	KGVAINMVTEEDKR	KGVAINMVTEEDKR	3	KGVAINMVTEEDKR3	28903.6	26256.8	23099.5
Q6P3V8	Q6P3V8	Q6P3V8_RAT	Eif4a1	ATP-dependent RNA helicase	1	KGVAINMVTEEDKR	KGVAINMVTEEDKR	4	KGVAINMVTEEDKR4	9366.43	15570	12127.9
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	KGVCEEISGVYQK	KGVC(UniMod:4)EEISGVYQK	2	KGVC(UniMod:4)EEISGVYQK2	32473	37076.6	27661.8
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	KGVCEEISGVYQK	KGVC(UniMod:4)EEISGVYQK	3	KGVC(UniMod:4)EEISGVYQK3	522274	550435	570305
Q1AAU6	Q1AAU6;A0A8I5ZRL8	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	0	KGVDLLQNLIK	KGVDLLQNLIK	2	KGVDLLQNLIK2	4732.2	2106.9	5591.77
Q1AAU6	Q1AAU6;A0A8I5ZRL8	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	0	KGVDLLQNLIK	KGVDLLQNLIK	3	KGVDLLQNLIK3	38264.3	33622.7	38578.7
Q62785	Q62785	HAP28_RAT	Pdap1	28 kDa heat- and acid-stable phosphoprotein	1	KGVEGLIDIENPNR	KGVEGLIDIENPNR	3	KGVEGLIDIENPNR3	9961.96	10913.7	9688.06
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	KGVFPVSFVHILSD	KGVFPVSFVHILSD	2	KGVFPVSFVHILSD2	7552.96	13433.7	4403.27
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	KGVFPVSFVHILSD	KGVFPVSFVHILSD	3	KGVFPVSFVHILSD3	15910.9	15120.9	13812.9
P29411	P29411	KAD3_RAT	Ak3	GTP:AMP phosphotransferase AK3, mitochondrial	1	KGVLETFSGTETNK	KGVLETFSGTETNK	3	KGVLETFSGTETNK3	7328.37	6983.71	6796.53
Q9R063	Q9R063	PRDX5_RAT	Prdx5	Peroxiredoxin-5, mitochondrial	1	KGVLFGVPGAFTPGCSK	KGVLFGVPGAFTPGC(UniMod:4)SK	2	KGVLFGVPGAFTPGC(UniMod:4)SK2	36011.9	41452.6	44769.3
Q9R063	Q9R063	PRDX5_RAT	Prdx5	Peroxiredoxin-5, mitochondrial	1	KGVLFGVPGAFTPGCSK	KGVLFGVPGAFTPGC(UniMod:4)SK	3	KGVLFGVPGAFTPGC(UniMod:4)SK3	229111	234327	285022
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	KGVNLPGAAVDLPAVSEK	KGVNLPGAAVDLPAVSEK	2	KGVNLPGAAVDLPAVSEK2	10686.4	6515.07	7139.29
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	KGVNLPGAAVDLPAVSEK	KGVNLPGAAVDLPAVSEK	3	KGVNLPGAAVDLPAVSEK3	192379	172336	189536
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	KGVNLPGAAVDLPAVSEKDIQDLK	KGVNLPGAAVDLPAVSEKDIQDLK	3	KGVNLPGAAVDLPAVSEKDIQDLK3	3087.3	1689.35	5787.19
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	KGVNLPGAAVDLPAVSEKDIQDLK	KGVNLPGAAVDLPAVSEKDIQDLK	4	KGVNLPGAAVDLPAVSEKDIQDLK4	57075.4	55556.5	68372.8
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	KGVPIIFADELDDSKPPPSSSMPLILQEEK	KGVPIIFADELDDSKPPPSSSMPLILQEEK	4	KGVPIIFADELDDSKPPPSSSMPLILQEEK4	20467.7	12476	20056.7
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	KGVQLQTHPNVDKK	KGVQLQTHPNVDKK	4	KGVQLQTHPNVDKK4	38427.9	27633.1	51003
Q09325	Q09325	MGAT1_RAT	Mgat1	Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	1	KGVSHGQFFDQHLK	KGVSHGQFFDQHLK	4	KGVSHGQFFDQHLK4	7291.92	3136.75	4578.33
Q5XFX0	Q5XFX0	TAGL2_RAT	Tagln2	Transgelin-2	1	KGVSQPQPGR	KGVSQPQPGR	2	KGVSQPQPGR2			20741.4
O54857	O54857	PTEN_RAT	Pten	Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN	1	KGVTIPSQR	KGVTIPSQR	2	KGVTIPSQR2	5919.83	4509.94	
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	KGVVPDDAVETLAR	KGVVPDDAVETLAR	2	KGVVPDDAVETLAR2	22753	23022.3	22169
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	KGVVPDDAVETLAR	KGVVPDDAVETLAR	3	KGVVPDDAVETLAR3	93770.7	104960	99696.4
A0JPM9	A0JPM9;A0A8I6GKU6	EIF3J_RAT	Eif3j	Eukaryotic translation initiation factor 3 subunit J	0	KGVVPGGGLK	KGVVPGGGLK	2	KGVVPGGGLK2	43025.5	47710	51474.5
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	KGWGEDEPDEESHTPLPPPMK	KGWGEDEPDEESHTPLPPPMK	4	KGWGEDEPDEESHTPLPPPMK4	31798.5	27352.6	37520.7
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	KGYEVIYLTEPVDEYCIQALPEFDGKR	KGYEVIYLTEPVDEYC(UniMod:4)IQALPEFDGKR	4	KGYEVIYLTEPVDEYC(UniMod:4)IQALPEFDGKR4	33748.7	42793.8	38932.2
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	KGYPEVALHFVK	KGYPEVALHFVK	3	KGYPEVALHFVK3	19850	20745.3	11708.9
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	KGYPEVALHFVKDEK	KGYPEVALHFVKDEK	3	KGYPEVALHFVKDEK3	9414.82	12070.7	4260.98
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	KGYPEVALHFVKDEK	KGYPEVALHFVKDEK	4	KGYPEVALHFVKDEK4	60045.6	72262.7	70101.2
P01026	P01026	CO3_RAT	C3	Complement C3	1	KGYTQQLAFK	KGYTQQLAFK	2	KGYTQQLAFK2	245643	240862	254650
P01026	P01026	CO3_RAT	C3	Complement C3	1	KGYTQQLAFK	KGYTQQLAFK	3	KGYTQQLAFK3	407550	398531	363529
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	KGYYQMK	KGYYQMK	2	KGYYQMK2	13253.7	6706.28	7550.71
Q9Z244	Q9Z244	GMPR1_RAT	Gmpr	GMP reductase 1	1	KHAGGVAEYR	KHAGGVAEYR	2	KHAGGVAEYR2			14675.3
Q9Z1P2	Q9QXQ0;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	KHEAFESDLAAHQDR	KHEAFESDLAAHQDR	2	KHEAFESDLAAHQDR2	2009.98		
Q9Z1P2	Q9QXQ0;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	KHEAFESDLAAHQDR	KHEAFESDLAAHQDR	3	KHEAFESDLAAHQDR3	20411.5	15962.5	14740.5
Q9Z1P2	Q9QXQ0;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	KHEAFESDLAAHQDR	KHEAFESDLAAHQDR	4	KHEAFESDLAAHQDR4	90849.5	80963.4	69046.9
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	KHEAIETDIAAYEER	KHEAIETDIAAYEER	3	KHEAIETDIAAYEER3	8201.82		2603.27
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	KHEAIETDIAAYEER	KHEAIETDIAAYEER	4	KHEAIETDIAAYEER4	9876.51	1623.96	1956.78
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	KHEALMSDLSAYGSSIQALR	KHEALMSDLSAYGSSIQALR	4	KHEALMSDLSAYGSSIQALR4	2656.65	8257.09	13142.3
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	KHEDFDK	KHEDFDK	1	KHEDFDK1			15873.4
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	KHEDFDK	KHEDFDK	2	KHEDFDK2			22789
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	KHEGFER	KHEGFER	2	KHEGFER2			70926
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	KHEISNELK	KHEISNELK	2	KHEISNELK2	3095.33		829.588
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	KHEYWFAVPQER	KHEYWFAVPQER	3	KHEYWFAVPQER3	14682.3	9675.91	14128.7
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	KHFTILDAPGHK	KHFTILDAPGHK	3	KHFTILDAPGHK3	44956	35631.6	39532
Q5HZV9	Q5HZV9	PP1R7_RAT	Ppp1r7	Protein phosphatase 1 regulatory subunit 7	1	KHGGGIVADLSQQSLK	KHGGGIVADLSQQSLK	3	KHGGGIVADLSQQSLK3	5143.05	7675.2	5033.71
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	KHGLEVIYMIEPIDEYCVQQLK	KHGLEVIYMIEPIDEYC(UniMod:4)VQQLK	4	KHGLEVIYMIEPIDEYC(UniMod:4)VQQLK4	2643.89		
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	KHHFGINKPEK	KHHFGINKPEK	3	KHHFGINKPEK3			4503.13
P63144	P63144;P62483	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	0	KHIIEGLK	KHIIEGLK	2	KHIIEGLK2	1952.66	1676.36	
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	KHIPQLQEQLSK	KHIPQLQEQLSK	3	KHIPQLQEQLSK3	16183	23438.5	17439.5
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	KHLEFMNQLK	KHLEFMNQLK	3	KHLEFMNQLK3	13593.5	18427.8	23905.3
P34058	P34058;A0A8I5ZRY7	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	KHLEINPDHPIVETLR	KHLEINPDHPIVETLR	3	KHLEINPDHPIVETLR3	31292.8	34413	26004.2
P34058	P34058;A0A8I5ZRY7	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	KHLEINPDHPIVETLR	KHLEINPDHPIVETLR	4	KHLEINPDHPIVETLR4	231557	323657	266233
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	KHLEINPDHSIIETLR	KHLEINPDHSIIETLR	3	KHLEINPDHSIIETLR3	4178.76	8548.38	6688.03
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	KHLEINPDHSIIETLR	KHLEINPDHSIIETLR	4	KHLEINPDHSIIETLR4	73424.2	107896	73847
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	KHLVESTNEMAPLK	KHLVESTNEMAPLK	3	KHLVESTNEMAPLK3	2629.29	4701.69	5754.28
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	KHNFTPLAR	KHNFTPLAR	2	KHNFTPLAR2	4639.6	5226.35	2179.68
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	KHNLLASK	KHNLLASK	2	KHNLLASK2	1352.22		3604.35
Q68FP2	Q68FP2	PON3_RAT	Pon3	Serum paraoxonase/lactonase 3	1	KHNNWDLTPVK	KHNNWDLTPVK	3	KHNNWDLTPVK3	19824.3	19610.9	18881.8
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	KHNQRPTFR	KHNQRPTFR	2	KHNQRPTFR2			5386.81
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	KHNQRPTFR	KHNQRPTFR	3	KHNQRPTFR3			499625
A0A8I6GL10	A0A8I6GL10	A0A8I6GL10_RAT	Uchl5	Ubiquitin carboxyl-terminal hydrolase	1	KHNYLPFIMELLK	KHNYLPFIMELLK	3	KHNYLPFIMELLK3	2548.03	800.207	1008.7
A0A8I6A263	A0A8I6A263	A0A8I6A263_RAT	Aimp1	Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	1	KHPDADSLYVEEVDVGEAAPR	KHPDADSLYVEEVDVGEAAPR	3	KHPDADSLYVEEVDVGEAAPR3	6616.05	6504.61	4326.81
A0A8I6A263	A0A8I6A263	A0A8I6A263_RAT	Aimp1	Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	1	KHPDADSLYVEEVDVGEAAPR	KHPDADSLYVEEVDVGEAAPR	4	KHPDADSLYVEEVDVGEAAPR4	27373.7	30401.4	26097.6
P63159	A0A8I6GBU6;A0A8I6GKR4;D3ZIU9;P63159;D3ZC69;A0A8I6GJ73;A0A8I6A2H1;A0A8I5Y7D7;A0A0G2K6P4;D3ZGW6	HMGB1_RAT	Hmgb1	High mobility group protein B1	0	KHPDASVNFSEFSK	KHPDASVNFSEFSK	2	KHPDASVNFSEFSK2	22343.9		
P63159	A0A8I6GBU6;A0A8I6GKR4;D3ZIU9;P63159;D3ZC69;A0A8I6GJ73;A0A8I6A2H1;A0A8I5Y7D7;A0A0G2K6P4;D3ZGW6	HMGB1_RAT	Hmgb1	High mobility group protein B1	0	KHPDASVNFSEFSK	KHPDASVNFSEFSK	3	KHPDASVNFSEFSK3	149198	43568.6	11333.6
P63159	A0A8I6GBU6;A0A8I6GKR4;D3ZIU9;P63159;D3ZC69;A0A8I6GJ73;A0A8I6A2H1;A0A8I5Y7D7;A0A0G2K6P4;D3ZGW6	HMGB1_RAT	Hmgb1	High mobility group protein B1	0	KHPDASVNFSEFSK	KHPDASVNFSEFSK	4	KHPDASVNFSEFSK4	31470.9	5480.2	5110.39
P52925	P52925;D3ZS25	HMGB2_RAT	Hmgb2	High mobility group protein B2	0	KHPDSSVNFAEFSK	KHPDSSVNFAEFSK	3	KHPDSSVNFAEFSK3	88018.8	17788.9	13536.7
P52925	P52925;D3ZS25	HMGB2_RAT	Hmgb2	High mobility group protein B2	0	KHPDSSVNFAEFSK	KHPDSSVNFAEFSK	4	KHPDSSVNFAEFSK4	16204	2952.53	
Q5RJQ4	Q5RJQ4	SIR2_RAT	Sirt2	NAD-dependent protein deacetylase sirtuin-2	1	KHPEPFFALAK	KHPEPFFALAK	3	KHPEPFFALAK3	31816.4	29862.3	37664.3
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	KHPEVDVLINFASLR	KHPEVDVLINFASLR	3	KHPEVDVLINFASLR3	13287.7	14446	6703.85
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	KHPEVDVLINFASLR	KHPEVDVLINFASLR	4	KHPEVDVLINFASLR4	6871.67	6519.99	5606.39
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	KHPFFSGIDWDNIR	KHPFFSGIDWDNIR	3	KHPFFSGIDWDNIR3	58005.3	59980.3	67664.5
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	KHPFFSGIDWDNIR	KHPFFSGIDWDNIR	4	KHPFFSGIDWDNIR4	5768.96	8510.49	11823.8
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	KHPFPCPTTYR	KHPFPC(UniMod:4)PTTYR	3	KHPFPC(UniMod:4)PTTYR3	58474.2	54641.5	61829.6
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	KHPHLPQTALSGGR	KHPHLPQTALSGGR	3	KHPHLPQTALSGGR3	5898.34	6387.9	5624.19
D4AE59	D4AE59	STK11_RAT	Stk11	Serine/threonine-protein kinase STK11	1	KHPLAEALVPIPPSPDTK	KHPLAEALVPIPPSPDTK	4	KHPLAEALVPIPPSPDTK4			3159.77
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	KHPSLELLHLYFNELSSEGR	KHPSLELLHLYFNELSSEGR	3	KHPSLELLHLYFNELSSEGR3	43147.4	38000.7	30639.5
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	KHPSLELLHLYFNELSSEGR	KHPSLELLHLYFNELSSEGR	4	KHPSLELLHLYFNELSSEGR4	187088	195172	178247
B2RZD6	B2RZD6	B2RZD6_RAT	Ndufa4	NDUFA4, mitochondrial complex associated	1	KHPSLIPLFVFIGAGGTGAALYVMR	KHPSLIPLFVFIGAGGTGAALYVMR	4	KHPSLIPLFVFIGAGGTGAALYVMR4	8467.35	5174.84	4428.34
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	KHPVHQDFLGFYVVDSHR	KHPVHQDFLGFYVVDSHR	3	KHPVHQDFLGFYVVDSHR3	48155.8	44612	47413.7
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	KHPVHQDFLGFYVVDSHR	KHPVHQDFLGFYVVDSHR	4	KHPVHQDFLGFYVVDSHR4	592471	619240	590189
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	KHQILEQAVEDYAETVHQLSK	KHQILEQAVEDYAETVHQLSK	4	KHQILEQAVEDYAETVHQLSK4	19795.7	22102.1	23718.7
Q924S1	Q924S1	PLCD_RAT	Agpat4	1-acyl-sn-glycerol-3-phosphate acyltransferase delta	1	KHQISMQVAQAK	KHQISMQVAQAK	3	KHQISMQVAQAK3			3279.75
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	KHTLSYVDTK	KHTLSYVDTK	3	KHTLSYVDTK3	1246.64	4948.13	6491.38
P01830	P01830	THY1_RAT	Thy1	Thy-1 membrane glycoprotein	1	KHVLSGTLGVPEHTYR	KHVLSGTLGVPEHTYR	3	KHVLSGTLGVPEHTYR3	5179.55		5360.06
P01830	P01830	THY1_RAT	Thy1	Thy-1 membrane glycoprotein	1	KHVLSGTLGVPEHTYR	KHVLSGTLGVPEHTYR	4	KHVLSGTLGVPEHTYR4	26091.3	39696.3	10107.1
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	KHVNQCIVISGESGSGK	KHVNQC(UniMod:4)IVISGESGSGK	3	KHVNQC(UniMod:4)IVISGESGSGK3	2013.66	4174.54	
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	KHVPDDFWPPQPK	KHVPDDFWPPQPK	3	KHVPDDFWPPQPK3	23316.6	36804.6	22067.3
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	KHVSEAICNEQHLFLPFSYK	KHVSEAIC(UniMod:4)NEQHLFLPFSYK	4	KHVSEAIC(UniMod:4)NEQHLFLPFSYK4	7461.78	32323	17288.5
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	KHYASEEIKEK	KHYASEEIKEK	3	KHYASEEIKEK3			3734.41
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	KIAELCDDPKER	KIAELC(UniMod:4)DDPKER	3	KIAELC(UniMod:4)DDPKER3	28277.8	10737.5	23583.8
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	KIAELMPGASGAEVK	KIAELMPGASGAEVK	3	KIAELMPGASGAEVK3	7092.02	7700.74	10713
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	KICDIAAELAR	KIC(UniMod:4)DIAAELAR	2	KIC(UniMod:4)DIAAELAR2	5228.67	3037.44	3437.56
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	KICDIAAELAR	KIC(UniMod:4)DIAAELAR	3	KIC(UniMod:4)DIAAELAR3	54532.4	62389.6	47530.5
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	KICEGFR	KIC(UniMod:4)EGFR	2	KIC(UniMod:4)EGFR2	2665.78		5528.06
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	KIDAAQNWLADPNGGPEGEEQIR	KIDAAQNWLADPNGGPEGEEQIR	3	KIDAAQNWLADPNGGPEGEEQIR3	12239.8	4867.7	5919.64
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	KIDAAQNWLADPNGGPEGEEQIRGALAEAR	KIDAAQNWLADPNGGPEGEEQIRGALAEAR	4	KIDAAQNWLADPNGGPEGEEQIRGALAEAR4	5641.17	12072.5	3380.57
Q63556	Q63556	SPA3M_RAT	Serpina3m	Serine protease inhibitor A3M (Fragment)	1	KIDELYLPR	KIDELYLPR	2	KIDELYLPR2	70036.3	58489.7	45988
Q63556	Q63556	SPA3M_RAT	Serpina3m	Serine protease inhibitor A3M (Fragment)	1	KIDELYLPR	KIDELYLPR	3	KIDELYLPR3	211228	231858	243731
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	KIDPNMK	KIDPNMK	2	KIDPNMK2		8568.7	
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	KIEDLGAAMEEALILDNK	KIEDLGAAMEEALILDNK	3	KIEDLGAAMEEALILDNK3	16858.1	12397.3	20594.3
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	KIEFPLPDEK	KIEFPLPDEK	2	KIEFPLPDEK2	3768.94	7984.19	6420.95
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	KIEFPLPDRR	KIEFPLPDRR	3	KIEFPLPDRR3	49248.6	40788.2	71116.6
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	KIEFPMPNEEAR	KIEFPMPNEEAR	3	KIEFPMPNEEAR3	92424.1	103421	99048.6
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	KIEFQPPEAK	KIEFQPPEAK	2	KIEFQPPEAK2	10692.2	8494.65	9407.17
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	KIEFQPPEAK	KIEFQPPEAK	3	KIEFQPPEAK3	44721	49304.5	54720.7
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	KIEFSLPDLEGR	KIEFSLPDLEGR	2	KIEFSLPDLEGR2	3404.09		1868.02
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	KIEFSLPDLEGR	KIEFSLPDLEGR	3	KIEFSLPDLEGR3	46232.6	47827.6	46498.4
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	KIEHSFEVK	KIEHSFEVK	2	KIEHSFEVK2	414068	246168	207513
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	KIEIAEAIPAEGLVSILK	KIEIAEAIPAEGLVSILK	2	KIEIAEAIPAEGLVSILK2	3194.72	2249.41	
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	KIEIAEAIPAEGLVSILK	KIEIAEAIPAEGLVSILK	3	KIEIAEAIPAEGLVSILK3	17933.4	27553.4	19475.9
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	KIENCNYAVELGK	KIENC(UniMod:4)NYAVELGK	2	KIENC(UniMod:4)NYAVELGK2	4950.43		
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	KIENCNYAVELGK	KIENC(UniMod:4)NYAVELGK	3	KIENC(UniMod:4)NYAVELGK3		21168.7	16569.7
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	KIEPELDGSSAVTSHDSSTNGLIGFIK	KIEPELDGSSAVTSHDSSTNGLIGFIK	4	KIEPELDGSSAVTSHDSSTNGLIGFIK4	9966.69	11952.3	7549.16
A0A8I5ZP83	D4A9Z8;A0A8I5ZP83	A0A8I5ZP83_RAT	Chmp4b	Charged multivesicular body protein 4B	0	KIEQELTAAK	KIEQELTAAK	2	KIEQELTAAK2	24998.4	21882.8	23618.4
P29117	P29117	PPIF_RAT	Ppif	Peptidyl-prolyl cis-trans isomerase F, mitochondrial	1	KIESFGSK	KIESFGSK	2	KIESFGSK2	71866.8	80636.8	100035
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	KIEVVMAEPLEK	KIEVVMAEPLEK	3	KIEVVMAEPLEK3	9345.62	12933	12278.8
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	KIFDALK	KIFDALK	2	KIFDALK2			4680.96
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	KIFDDAYK	KIFDDAYK	2	KIFDDAYK2	7729.16	4729.64	9475.63
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	KIFDIDEAEEAIKDVK	KIFDIDEAEEAIKDVK	3	KIFDIDEAEEAIKDVK3	11029.3	12157.2	8924.26
Q63190	Q63190	EMD_RAT	Emd	Emerin	1	KIFEYETQR	KIFEYETQR	3	KIFEYETQR3	10090.9	7444.32	4158.56
P05545	A0A0G2JSK1;P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	0	KIFSQQADLSR	KIFSQQADLSR	2	KIFSQQADLSR2	7355.81	10863.1	5312.17
P05545	A0A0G2JSK1;P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	0	KIFSQQADLSR	KIFSQQADLSR	3	KIFSQQADLSR3	79626	96143.9	109479
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	KIGDEYFTFITDCK	KIGDEYFTFITDC(UniMod:4)K	3	KIGDEYFTFITDC(UniMod:4)K3	2416.78	2093.28	
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	KIGDEYFTFITDCKDPK	KIGDEYFTFITDC(UniMod:4)KDPK	3	KIGDEYFTFITDC(UniMod:4)KDPK3	47354.8	31520.7	20451.9
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	KIGDEYFTFITDCKDPK	KIGDEYFTFITDC(UniMod:4)KDPK	4	KIGDEYFTFITDC(UniMod:4)KDPK4	4888.95	4554.27	5728.26
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	KIHIDLPNEQAR	KIHIDLPNEQAR	3	KIHIDLPNEQAR3	22669.3	23988.2	19103.7
Q497B0	Q497B0	NIT2_RAT	Nit2	Omega-amidase NIT2	1	KIHLFDIDVPGK	KIHLFDIDVPGK	3	KIHLFDIDVPGK3	6082.35	5219.93	5154.91
Q9QX79	Q9QX79	FETUB_RAT	Fetub	Fetuin-B	1	KIHSMCPDCPHPVDLSAPSVLEAATESLAK	KIHSMC(UniMod:4)PDC(UniMod:4)PHPVDLSAPSVLEAATESLAK	4	KIHSMC(UniMod:4)PDC(UniMod:4)PHPVDLSAPSVLEAATESLAK4	7551.42	8735.03	5734.77
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	KIIDNVR	KIIDNVR	2	KIIDNVR2	51117.4	61846.8	42345.5
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	KIIECIIEESQK	KIIEC(UniMod:4)IIEESQK	2	KIIEC(UniMod:4)IIEESQK2	4491.15	1644.94	
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	KIIECIIEESQK	KIIEC(UniMod:4)IIEESQK	3	KIIEC(UniMod:4)IIEESQK3	10186.7	9864.85	6668.33
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	KIIEDCSNSDETVK	KIIEDC(UniMod:4)SNSDETVK	3	KIIEDC(UniMod:4)SNSDETVK3	701.227	4508.33	3738.49
A0A8I5YBR2	A0A8I5YBR2	A0A8I5YBR2_RAT	Cops6	COP9 signalosome complex subunit 6	1	KIIIDKEYYYTK	KIIIDKEYYYTK	3	KIIIDKEYYYTK3	5683.48	10223.6	7873.02
A0A8I5YBR2	A0A8I5YBR2	A0A8I5YBR2_RAT	Cops6	COP9 signalosome complex subunit 6	1	KIIIDKEYYYTK	KIIIDKEYYYTK	4	KIIIDKEYYYTK4	5361.5	9050.94	6902.74
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	KIISSVIMTEDIK	KIISSVIMTEDIK	3	KIISSVIMTEDIK3	4900.25	7952.82	5006.69
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	KIITTDLR	KIITTDLR	2	KIITTDLR2	24557.1	23139.3	13309.7
F1M0B5	F1M0B5	F1M0B5_RAT	Cd84	CD84 molecule	1	KIIYSAVSR	KIIYSAVSR	2	KIIYSAVSR2	28136.9	33994	37648.8
P0C5H9	P0C5H9	MANF_RAT	Manf	Mesencephalic astrocyte-derived neurotrophic factor	1	KILDDWGEMCK	KILDDWGEMC(UniMod:4)K	3	KILDDWGEMC(UniMod:4)K3	11812.6	7226.89	5818.74
P02401	P02401;D4A4D5	RLA2_RAT	Rplp2	Large ribosomal subunit protein P2	0	KILDSVGIEADDER	KILDSVGIEADDER	3	KILDSVGIEADDER3	18813	15319.6	18834.4
P02401	P02401;D4A4D5	RLA2_RAT	Rplp2	Large ribosomal subunit protein P2	0	KILDSVGIEADDERLNK	KILDSVGIEADDERLNK	3	KILDSVGIEADDERLNK3	3541.08	2167.02	4830.02
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	KILGEVINALK	KILGEVINALK	3	KILGEVINALK3	7684.3	4298.18	10194.8
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	KILHVDNHIGISIAGLTADAR	KILHVDNHIGISIAGLTADAR	4	KILHVDNHIGISIAGLTADAR4	8987.42	6209.2	3725.86
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	KILVHLGLLTK	KILVHLGLLTK	3	KILVHLGLLTK3	3603.09	1424.24	
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	KIMADSGPIYDK	KIMADSGPIYDK	2	KIMADSGPIYDK2	64149.9	69138.1	70806.2
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	KIMADSGPIYDK	KIMADSGPIYDK	3	KIMADSGPIYDK3	715293	750921	610963
Q5PQM0	Q5PQM0	TM168_RAT	Tmem168	Transmembrane protein 168	1	KINDQYVAVQGAELAK	KINDQYVAVQGAELAK	3	KINDQYVAVQGAELAK3	5798.13	15100.5	11350.7
P0C5H9	P0C5H9	MANF_RAT	Manf	Mesencephalic astrocyte-derived neurotrophic factor	1	KINELMPK	KINELMPK	2	KINELMPK2	11353.1		7873.74
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	KINELTGIK	KINELTGIK	2	KINELTGIK2	11816.3	7733.38	8348.02
P55062	P55062	BI1_RAT	Tmbim6	Bax inhibitor 1	1	KINFDALLK	KINFDALLK	2	KINFDALLK2	4821.55	3527.92	10331.5
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	KINKPGNMIVAFSNLAER	KINKPGNMIVAFSNLAER	4	KINKPGNMIVAFSNLAER4		3397.14	
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	KINNFCHSHCPPIK	KINNFC(UniMod:4)HSHC(UniMod:4)PPIK	4	KINNFC(UniMod:4)HSHC(UniMod:4)PPIK4	3328.86	4848.92	
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	KINQDGTFLVR	KINQDGTFLVR	3	KINQDGTFLVR3	34574.3	27234.2	33674.5
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	KINSNPNPLVQMSVGHK	KINSNPNPLVQMSVGHK	3	KINSNPNPLVQMSVGHK3	5994.96	5868.07	12042.3
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	KINVSPTTYR	KINVSPTTYR	2	KINVSPTTYR2	15094.6	18960.9	11928.6
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	KINVSPTTYR	KINVSPTTYR	3	KINVSPTTYR3	46066.5	58330.2	57225.9
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	KIPAGAVSVFLGYTDVSGSTSAPSLK	KIPAGAVSVFLGYTDVSGSTSAPSLK	3	KIPAGAVSVFLGYTDVSGSTSAPSLK3	25520	25445.5	26242.9
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	KIPALTENDPETWIVCNFSVDHDSAPLNNR	KIPALTENDPETWIVC(UniMod:4)NFSVDHDSAPLNNR	4	KIPALTENDPETWIVC(UniMod:4)NFSVDHDSAPLNNR4	36328.9	46436.9	46137.9
Q9Z118	Q9Z118	PTBP3_RAT	Ptbp3	Polypyrimidine tract-binding protein 3	1	KIPCDVTEAEVISLGLPFGK	KIPC(UniMod:4)DVTEAEVISLGLPFGK	3	KIPC(UniMod:4)DVTEAEVISLGLPFGK3	12517.6	17287.2	17700.6
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	KIPELYKPIFR	KIPELYKPIFR	3	KIPELYKPIFR3	68624.4	85896.5	126655
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	KIPFTDIYIGGAPQEVLQSR	KIPFTDIYIGGAPQEVLQSR	3	KIPFTDIYIGGAPQEVLQSR3	24208.6	29482.2	42716.6
A0A8I6ADL4	A0A8I6ADL4	A0A8I6ADL4_RAT	Serinc3	Serine incorporator 3	1	KIPGFCEGEFQIK	KIPGFC(UniMod:4)EGEFQIK	3	KIPGFC(UniMod:4)EGEFQIK3	4668.3	17091.9	7167.17
P08650	P08650	CO5_RAT	C5	Complement C5	1	KIPITYDNGFLFIHTDKPVYTPDQSVK	KIPITYDNGFLFIHTDKPVYTPDQSVK	4	KIPITYDNGFLFIHTDKPVYTPDQSVK4	122182	115500	95015.5
P07151	P07151	B2MG_RAT	B2m	Beta-2-microglobulin	1	KIPNIEMSDLSFSK	KIPNIEMSDLSFSK	2	KIPNIEMSDLSFSK2	221849	201179	173304
P07151	P07151	B2MG_RAT	B2m	Beta-2-microglobulin	1	KIPNIEMSDLSFSK	KIPNIEMSDLSFSK	3	KIPNIEMSDLSFSK3	1.02583e+06	1.05857e+06	1.14014e+06
P35565	P35565	CALX_RAT	Canx	Calnexin	1	KIPNPDFFEDLEPFR	KIPNPDFFEDLEPFR	2	KIPNPDFFEDLEPFR2	43279.3	62011.1	62781.9
P35565	P35565	CALX_RAT	Canx	Calnexin	1	KIPNPDFFEDLEPFR	KIPNPDFFEDLEPFR	3	KIPNPDFFEDLEPFR3	858377	945656	1.00506e+06
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	KIPSGAFEDLENLK	KIPSGAFEDLENLK	3	KIPSGAFEDLENLK3	46654.7	29151.6	41979.5
M0R5F1	M0R5F1	M0R5F1_RAT	Aspn	Asporin	1	KIPSGLQELK	KIPSGLQELK	2	KIPSGLQELK2	112802	115668	114066
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	KIPVLVQSK	KIPVLVQSK	2	KIPVLVQSK2	93054.9	88859.6	96111.7
B0BNE5	B0BNE5	ESTD_RAT	Esd	S-formylglutathione hydrolase	1	KIPVVFR	KIPVVFR	2	KIPVVFR2	18416.5	22900.6	33233.5
Q64232	Q64232	TECR_RAT	Tecr	Very-long-chain enoyl-CoA reductase	1	KIPYPTK	KIPYPTK	2	KIPYPTK2	41642.9	33186.8	35554.4
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	KIQALQQQADDAEDR	KIQALQQQADDAEDR	3	KIQALQQQADDAEDR3	24267.2	24471.9	31877.7
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	KIQALQQQADDAEDRAQGLQR	KIQALQQQADDAEDRAQGLQR	4	KIQALQQQADDAEDRAQGLQR4	4062.38	18423.1	12626.4
Q5XFX0	Q5XFX0	TAGL2_RAT	Tagln2	Transgelin-2	1	KIQASTMAFK	KIQASTMAFK	2	KIQASTMAFK2	2689.96	5254.15	1907.64
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	KIQEESLR	KIQEESLR	2	KIQEESLR2	12137.8	8002.59	8126.56
D4ADM2	D4ADM2	D4ADM2_RAT	Pan3	PAN2-PAN3 deadenylation complex subunit PAN3	1	KIQHSNIVTLR	KIQHSNIVTLR	3	KIQHSNIVTLR3	2094.39	2267.11	
D3ZHA0	D3ZHA0;A0A0G2JXT8;A0A8I5ZV49	FLNC_RAT	Flnc	Filamin-C	0	KIQQNTFTR	KIQQNTFTR	2	KIQQNTFTR2	35953.3	51348.4	43336
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	KIQVLQQQADDAEER	KIQVLQQQADDAEER	3	KIQVLQQQADDAEER3	31015.9	27595.9	25068.6
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	KIQVPNCDEIFYAGTGNLLLR	KIQVPNC(UniMod:4)DEIFYAGTGNLLLR	3	KIQVPNC(UniMod:4)DEIFYAGTGNLLLR3	17057.5	26130.2	20479.6
P08650	P08650	CO5_RAT	C5	Complement C5	1	KISCTNANLVK	KISC(UniMod:4)TNANLVK	3	KISC(UniMod:4)TNANLVK3	1429.54	3351.61	2199.4
D3ZUP5	D3ZUP5	D3ZUP5_RAT	Brk1	BRICK1 subunit of SCAR/WAVE actin nucleating complex	1	KISDFLNSFDMSCR	KISDFLNSFDMSC(UniMod:4)R	3	KISDFLNSFDMSC(UniMod:4)R3	27220.4	21581.5	24428.9
B5DEH2	B5DEH2	ERLN2_RAT	Erlin2	Erlin-2	1	KISEIEDAAFLAR	KISEIEDAAFLAR	3	KISEIEDAAFLAR3	4977.07	2880.36	3486.56
Q63797	Q63797	PSME1_RAT	Psme1	Proteasome activator complex subunit 1	1	KISELDAFLKEPALNEANLSNLK	KISELDAFLKEPALNEANLSNLK	4	KISELDAFLKEPALNEANLSNLK4	13532.3	12536.8	14042.7
O55156	O55156;Q9JK25	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	0	KISGTTALQEALK	KISGTTALQEALK	3	KISGTTALQEALK3	2921.51	6573.04	11299.7
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	KISSDLDGHPVPK	KISSDLDGHPVPK	3	KISSDLDGHPVPK3	9617.55	7081.86	9048.97
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	KISSNLADFAFSLYR	KISSNLADFAFSLYR	3	KISSNLADFAFSLYR3	27166.5	20890.1	15206.7
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	KITESVTETAQTIKK	KITESVTETAQTIKK	3	KITESVTETAQTIKK3	2917.6	10250.8	2837.93
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	KITEVLVR	KITEVLVR	2	KITEVLVR2	10284	15422.7	10007.2
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	KITEVSVVGHVSYDK	KITEVSVVGHVSYDK	2	KITEVSVVGHVSYDK2	2509.03	2469.21	3037.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	KITEVSVVGHVSYDK	KITEVSVVGHVSYDK	3	KITEVSVVGHVSYDK3	62966.7	60169.8	66895.8
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	KITEVSVVGHVSYDK	KITEVSVVGHVSYDK	4	KITEVSVVGHVSYDK4	29298.7	24598.5	34398.3
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	KITEVSVVGHVSYDKK	KITEVSVVGHVSYDKK	4	KITEVSVVGHVSYDKK4		15890.3	12089.4
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	KITGEIMHALK	KITGEIMHALK	3	KITGEIMHALK3	13836	6406.97	9881.15
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	KITGIEPLPGENK	KITGIEPLPGENK	3	KITGIEPLPGENK3	18729.9	21412.3	14070.4
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	KITIGQAPTEK	KITIGQAPTEK	3	KITIGQAPTEK3		4266.09	4354.08
P10111	P10111;A0A8I6A629	PPIA_RAT	Ppia	Peptidyl-prolyl cis-trans isomerase A	0	KITISDCGQL	KITISDC(UniMod:4)GQL	2	KITISDC(UniMod:4)GQL2	96218.2	132933	136420
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	KIVICVQQTANK	KIVIC(UniMod:4)VQQTANK	3	KIVIC(UniMod:4)VQQTANK3	2013.27		3262.75
P29117	P29117	PPIF_RAT	Ppif	Peptidyl-prolyl cis-trans isomerase F, mitochondrial	1	KIVITDCGQLS	KIVITDC(UniMod:4)GQLS	2	KIVITDC(UniMod:4)GQLS2	309625	309386	344160
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	KIVQESDLER	KIVQESDLER	3	KIVQESDLER3	19020.1	19718	18970.5
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	KIYDVEQSR	KIYDVEQSR	2	KIYDVEQSR2	6932.28	6636.28	6484.67
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	KIYIGDDNPLTLTVK	KIYIGDDNPLTLTVK	2	KIYIGDDNPLTLTVK2	4841.17	3518.62	
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	KIYIGDDNPLTLTVK	KIYIGDDNPLTLTVK	3	KIYIGDDNPLTLTVK3	17286.6	24023.4	31726.2
P08649	P08649	CO4_RAT	C4	Complement C4	1	KKEVFAPTSIFQDDFIIPDISEPGTWK	KKEVFAPTSIFQDDFIIPDISEPGTWK	4	KKEVFAPTSIFQDDFIIPDISEPGTWK4	14502.9	12139.8	26924.9
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KKMEDGVGCLETAEEAK	KKMEDGVGC(UniMod:4)LETAEEAK	3	KKMEDGVGC(UniMod:4)LETAEEAK3	19116.7	19759	7939.78
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	KKPAPDTQAESGPGDGGGEPDGGVR	KKPAPDTQAESGPGDGGGEPDGGVR	4	KKPAPDTQAESGPGDGGGEPDGGVR4	22602.3	24762.7	32851.9
A0A8I5ZZT4	A0A8I5ZZT4	A0A8I5ZZT4_RAT	Pstpip2	Proline-serine-threonine phosphatase-interacting protein 2	1	KKPCGQSEINTLK	KKPC(UniMod:4)GQSEINTLK	3	KKPC(UniMod:4)GQSEINTLK3	2112.83	3051.36	
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	KKPDITFMFQDEIEGCLR	KKPDITFMFQDEIEGC(UniMod:4)LR	3	KKPDITFMFQDEIEGC(UniMod:4)LR3		2369.47	
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	KKPDITFMFQDEIEGCLR	KKPDITFMFQDEIEGC(UniMod:4)LR	4	KKPDITFMFQDEIEGC(UniMod:4)LR4	9926.64		7110.45
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	KKPEQVVALDAQNIVAVSCGEAHTLALNDK	KKPEQVVALDAQNIVAVSC(UniMod:4)GEAHTLALNDK	4	KKPEQVVALDAQNIVAVSC(UniMod:4)GEAHTLALNDK4	5174.57	12754.2	5991.89
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	KKPFMLDEEGDAQTEETQPSETK	KKPFMLDEEGDAQTEETQPSETK	3	KKPFMLDEEGDAQTEETQPSETK3	12263.4	13935.4	13267.2
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	KKPFMLDEEGDAQTEETQPSETK	KKPFMLDEEGDAQTEETQPSETK	4	KKPFMLDEEGDAQTEETQPSETK4	8883.56	10020.6	7592.38
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	KKPGPAPSEETTPTPQPLPAGAPELQK	KKPGPAPSEETTPTPQPLPAGAPELQK	3	KKPGPAPSEETTPTPQPLPAGAPELQK3	44779.3	41529.5	32400.9
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	KKPGPAPSEETTPTPQPLPAGAPELQK	KKPGPAPSEETTPTPQPLPAGAPELQK	4	KKPGPAPSEETTPTPQPLPAGAPELQK4	204496	224852	213076
G3V7N0	G3V7N0	G3V7N0_RAT	Hs2st1	Heparan sulfate 2-O-sulfotransferase 1	1	KKPIYINVVR	KKPIYINVVR	3	KKPIYINVVR3	29446.6	28549.4	28231.2
A0A0G2K0I6	A0A0G2K0I6	A0A0G2K0I6_RAT	Cdh5	Cadherin 5	1	KKPLIGTVVAK	KKPLIGTVVAK	3	KKPLIGTVVAK3	76829.5	82197	72091.4
Q4QQV2	Q4QQV2	DOK1_RAT	Dok1	Docking protein 1	1	KKPLYWDLYGHVQQQLLK	KKPLYWDLYGHVQQQLLK	3	KKPLYWDLYGHVQQQLLK3	14936	17521.6	8424.22
Q4QQV2	Q4QQV2	DOK1_RAT	Dok1	Docking protein 1	1	KKPLYWDLYGHVQQQLLK	KKPLYWDLYGHVQQQLLK	4	KKPLYWDLYGHVQQQLLK4	29112.8	25850.7	35730.3
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	KKPPSISAQFQTSLNK	KKPPSISAQFQTSLNK	3	KKPPSISAQFQTSLNK3	9577.96	11719.4	6547.06
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	KKPYIQLK	KKPYIQLK	2	KKPYIQLK2	11856.1	11100.7	10172.5
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	KKPYLEPK	KKPYLEPK	2	KKPYLEPK2	11425		23522.6
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	KKPYSMDPDHR	KKPYSMDPDHR	2	KKPYSMDPDHR2			5006.7
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	KKPYSMDPDHR	KKPYSMDPDHR	3	KKPYSMDPDHR3	3321.72		
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	KLAEEKDELLSQIR	KLAEEKDELLSQIR	4	KLAEEKDELLSQIR4	7714.75	6375.48	8163.73
P17220	P17220	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	1	KLAQQYYLVYQEPIPTAQLVQR	KLAQQYYLVYQEPIPTAQLVQR	3	KLAQQYYLVYQEPIPTAQLVQR3	12214.2	9759.48	9811.19
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	KLASLTLSHNAITHLPENVFR	KLASLTLSHNAITHLPENVFR	4	KLASLTLSHNAITHLPENVFR4	16623.2	8437.86	7633.34
P85108	P69897;Q4QRB4;M0R8B6;Q6P9T8;B4F7C2;P85108;Q4QQV0;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	KLAVNMVPFPR	KLAVNMVPFPR	3	KLAVNMVPFPR3	90074.7	106029	98823.4
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	KLCMAALSHQPQEFPAYVEPTNDEICEAFR	KLC(UniMod:4)MAALSHQPQEFPAYVEPTNDEIC(UniMod:4)EAFR	4	KLC(UniMod:4)MAALSHQPQEFPAYVEPTNDEIC(UniMod:4)EAFR4	12224.9	8294.41	12687.8
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	KLCQGLFFR	KLC(UniMod:4)QGLFFR	3	KLC(UniMod:4)QGLFFR3	13244.3	11156.4	9932.08
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	KLCSDFLK	KLC(UniMod:4)SDFLK	2	KLC(UniMod:4)SDFLK2	21589.4	22130.5	20954.1
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	KLCSDPEGGLSK	KLC(UniMod:4)SDPEGGLSK	3	KLC(UniMod:4)SDPEGGLSK3	11679.5	20434.6	12152.3
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	KLCSLDNGDCDQFCR	KLC(UniMod:4)SLDNGDC(UniMod:4)DQFC(UniMod:4)R	2	KLC(UniMod:4)SLDNGDC(UniMod:4)DQFC(UniMod:4)R2	2281.9	3061.58	
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	KLCSLDNGDCDQFCR	KLC(UniMod:4)SLDNGDC(UniMod:4)DQFC(UniMod:4)R	3	KLC(UniMod:4)SLDNGDC(UniMod:4)DQFC(UniMod:4)R3	71949.7	66975.5	87880.5
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	KLCSLDNGDCDQFCREEQNSVVCSCAK	KLC(UniMod:4)SLDNGDC(UniMod:4)DQFC(UniMod:4)REEQNSVVC(UniMod:4)SC(UniMod:4)AK	4	KLC(UniMod:4)SLDNGDC(UniMod:4)DQFC(UniMod:4)REEQNSVVC(UniMod:4)SC(UniMod:4)AK4	19688	48889.4	45481.6
P58751	P58751	RELN_RAT	Reln	Reelin	1	KLCTPYMDTTGYGNLR	KLC(UniMod:4)TPYMDTTGYGNLR	3	KLC(UniMod:4)TPYMDTTGYGNLR3	15880.6	21645.1	27606.1
P27615	P27615	SCRB2_RAT	Scarb2	Lysosome membrane protein 2	1	KLDDFVETGNIR	KLDDFVETGNIR	2	KLDDFVETGNIR2	1700.17		
P27615	P27615	SCRB2_RAT	Scarb2	Lysosome membrane protein 2	1	KLDDFVETGNIR	KLDDFVETGNIR	3	KLDDFVETGNIR3	14310.7	16205.2	8373.87
P10760	P10760;A0A8I6A7X9	SAHH_RAT	Ahcy	Adenosylhomocysteinase	0	KLDEAVAEAHLGK	KLDEAVAEAHLGK	3	KLDEAVAEAHLGK3	36657.7	20445.5	31509.6
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	KLDEDSLTK	KLDEDSLTK	2	KLDEDSLTK2	9674.63	6631.76	6879.39
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	KLDEFGR	KLDEFGR	2	KLDEFGR2	270764	223515	234115
P18266	P18266;P18265	GSK3B_RAT	Gsk3b	Glycogen synthase kinase-3 beta	0	KLDHCNIVR	KLDHC(UniMod:4)NIVR	3	KLDHC(UniMod:4)NIVR3		6977.36	8262.29
Q68FX0	Q68FX0	IDH3B_RAT	Idh3B	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	KLDLFANVVHVK	KLDLFANVVHVK	3	KLDLFANVVHVK3	3303.55	5493.34	3574.33
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	KLDNTTAAVQELGR	KLDNTTAAVQELGR	3	KLDNTTAAVQELGR3	8885.86	11791.3	13428.3
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	KLDPAQSASR	KLDPAQSASR	2	KLDPAQSASR2	83043.5		78790.6
Q7TP98	Q7TP98	ILF2_RAT	Ilf2	Interleukin enhancer-binding factor 2	1	KLDPELHLDIK	KLDPELHLDIK	3	KLDPELHLDIK3	28996.7	6624.97	
Q68FR6	Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	1	KLDPGSEETQTLVR	KLDPGSEETQTLVR	2	KLDPGSEETQTLVR2	81174.4	73427.9	86902.7
Q68FR6	Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	1	KLDPGSEETQTLVR	KLDPGSEETQTLVR	3	KLDPGSEETQTLVR3	266528	274390	253005
Q9WUD9	Q9WUD9	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	1	KLDSGGFYITSR	KLDSGGFYITSR	3	KLDSGGFYITSR3	42283.1	41458.1	69600.5
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	KLDVTPIR	KLDVTPIR	2	KLDVTPIR2	49123.8	53357.3	41243.7
Q3B8Q2	Q3B8Q2	IF4A3_RAT	Eif4a3	Eukaryotic initiation factor 4A-III	1	KLDYGQHVVAGTPGR	KLDYGQHVVAGTPGR	3	KLDYGQHVVAGTPGR3	22993.1	314.434	2928.17
P67779	P67779;A0A8I5ZUY9	PHB1_RAT	Phb1	Prohibitin 1	0	KLEAAEDIAYQLSR	KLEAAEDIAYQLSR	3	KLEAAEDIAYQLSR3	14710.7	10495.7	11130.5
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	KLEAMTNSK	KLEAMTNSK	2	KLEAMTNSK2	20199.9	78806.9	64116
Q8R492	Q8R492	Q8R492_RAT	Fap	Fibroblast activation protein, alpha	1	KLEDGGMTFWYK	KLEDGGMTFWYK	3	KLEDGGMTFWYK3		2477.03	4770.48
P62630	P62630;M0R757;A0A8I6AQI9	EF1A1_RAT	Eef1a1	Elongation factor 1-alpha 1	0	KLEDGPK	KLEDGPK	2	KLEDGPK2			47814.2
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	KLEDGYFGGAR	KLEDGYFGGAR	3	KLEDGYFGGAR3	10145.8	10849.2	7334.93
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	KLEDLGDLRR	KLEDLGDLRR	3	KLEDLGDLRR3	75991.6	73628.4	65547.8
F1LRE5	F1LRE5	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	1	KLEDQNEYESR	KLEDQNEYESR	3	KLEDQNEYESR3	8007.85	11685.9	5461.73
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	KLEDYYK	KLEDYYK	2	KLEDYYK2	9471.88	8666.09	13061.5
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KLEEDQIIMEDQNCK	KLEEDQIIMEDQNC(UniMod:4)K	2	KLEEDQIIMEDQNC(UniMod:4)K2	195737	203712	207549
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KLEEDQIIMEDQNCK	KLEEDQIIMEDQNC(UniMod:4)K	3	KLEEDQIIMEDQNC(UniMod:4)K3	1.70623e+06	2.12953e+06	2.14235e+06
P11915	P11915	SCP2_RAT	Scp2	Sterol carrier protein 2	1	KLEEEGEEFVKK	KLEEEGEEFVKK	3	KLEEEGEEFVKK3	9828.91	6673.2	12643.1
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	KLEEGGPVYSPPAQVVVK	KLEEGGPVYSPPAQVVVK	3	KLEEGGPVYSPPAQVVVK3	66099.8	65769.1	41504.5
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	KLEEHEEALLGR	KLEEHEEALLGR	3	KLEEHEEALLGR3	7569.27	8318.66	13731.7
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	KLEEIILQITTVEAIIAR	KLEEIILQITTVEAIIAR	3	KLEEIILQITTVEAIIAR3		4475.63	4770.83
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	KLEEIPK	KLEEIPK	2	KLEEIPK2	31421.7	29867	27467.1
Q01986	Q01986	MP2K1_RAT	Map2k1	Dual specificity mitogen-activated protein kinase kinase 1	1	KLEELELDEQQRK	KLEELELDEQQRK	3	KLEELELDEQQRK3		2703.69	
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	KLEEQSLHDVLFELSK	KLEEQSLHDVLFELSK	3	KLEEQSLHDVLFELSK3	6158.37	7189.69	
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	KLEEQSLHDVLFELSK	KLEEQSLHDVLFELSK	4	KLEEQSLHDVLFELSK4	10257	16989.4	7509.19
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	KLEEVER	KLEEVER	2	KLEEVER2	10775.4		
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KLEGDSTDLSDQIAELQAQIAELK	KLEGDSTDLSDQIAELQAQIAELK	3	KLEGDSTDLSDQIAELQAQIAELK3	25696	31561.6	24408
P35280	P35280	RAB8A_RAT	Rab8a	Ras-related protein Rab-8A	1	KLEGNSPQGSSHGVK	KLEGNSPQGSSHGVK	3	KLEGNSPQGSSHGVK3			12362.1
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	KLEHLITELVHQR	KLEHLITELVHQR	4	KLEHLITELVHQR4	16198.3	23577.3	16971.9
A0A8I6A822	A0A8I6A822	A0A8I6A822_RAT	Tm9sf3	Transmembrane 9 superfamily member	1	KLEIGFNGNR	KLEIGFNGNR	3	KLEIGFNGNR3	23462.3	20939	25063.9
P49911	P49911;Q9EST6	AN32A_RAT	Anp32a	Acidic leucine-rich nuclear phosphoprotein 32 family member A	0	KLELSENR	KLELSENR	2	KLELSENR2		15254.6	10032.3
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KLEMDLK	KLEMDLK	1	KLEMDLK1	4167.79	3818.73	14241.6
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KLEMDLK	KLEMDLK	2	KLEMDLK2	864745	1.02834e+06	939109
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KLEMDLKDLEAHIDTANK	KLEMDLKDLEAHIDTANK	3	KLEMDLKDLEAHIDTANK3	12221.9	15096	8744.05
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KLEMDLKDLEAHIDTANK	KLEMDLKDLEAHIDTANK	4	KLEMDLKDLEAHIDTANK4	40096.7	64504.5	63479
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	KLENCNYAVDLGK	KLENC(UniMod:4)NYAVDLGK	3	KLENC(UniMod:4)NYAVDLGK3	17218.5	17571.1	19203.4
Q63598	Q63598	PLST_RAT	Pls3	Plastin-3	1	KLENCNYAVELGK	KLENC(UniMod:4)NYAVELGK	2	KLENC(UniMod:4)NYAVELGK2		4500.13	5509.24
Q63598	Q63598	PLST_RAT	Pls3	Plastin-3	1	KLENCNYAVELGK	KLENC(UniMod:4)NYAVELGK	3	KLENC(UniMod:4)NYAVELGK3	31540	26971.4	19004.8
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	KLENMYHLFQLK	KLENMYHLFQLK	3	KLENMYHLFQLK3	7054.04	10681.7	8043.42
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	KLENMYHLFQLK	KLENMYHLFQLK	4	KLENMYHLFQLK4	3114.34	6188.52	5309.79
M0R402	M0R402	M0R402_RAT	Tmx3	Thioredoxin-related transmembrane protein 3	1	KLEPIWNEVGLEMK	KLEPIWNEVGLEMK	3	KLEPIWNEVGLEMK3	32838.9	38211.5	19865.7
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	KLEQNLSFEIK	KLEQNLSFEIK	3	KLEQNLSFEIK3	9081.23	11147.3	8148.98
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	KLERLGHVSR	KLERLGHVSR	3	KLERLGHVSR3	3239.03		15993.1
Q9Z2L0	Q9Z2L0;A0A8I6GHL9	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	0	KLETAVNLAWTAGNSNTR	KLETAVNLAWTAGNSNTR	3	KLETAVNLAWTAGNSNTR3	44278.3	34699.9	30459.2
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	KLETTLLEELPAYK	KLETTLLEELPAYK	3	KLETTLLEELPAYK3	6056.14	4603.33	8430.29
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	KLEVNEAELLR	KLEVNEAELLR	2	KLEVNEAELLR2	2339.01	2376.38	3318.95
A0A8I5ZYD8	A0A8I5ZYD8	A0A8I5ZYD8_RAT	Fhl3	Four and a half LIM domains 3	1	KLEYGGQTWHEHCFLCSGCEQPLGSR	KLEYGGQTWHEHC(UniMod:4)FLC(UniMod:4)SGC(UniMod:4)EQPLGSR	4	KLEYGGQTWHEHC(UniMod:4)FLC(UniMod:4)SGC(UniMod:4)EQPLGSR4	12840.1	16039.1	16570
P14046	A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	KLFDELVVDK	KLFDELVVDK	2	KLFDELVVDK2	4.60178e+06	3.35116e+06	3.06443e+06
P14046	A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	KLFDELVVDK	KLFDELVVDK	3	KLFDELVVDK3	7.61865e+06	5.62101e+06	5.63393e+06
Q03626	A0A8I6AG69;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	KLFDELVVDKDLFHCLSFTIPR	KLFDELVVDKDLFHC(UniMod:4)LSFTIPR	3	KLFDELVVDKDLFHC(UniMod:4)LSFTIPR3	36392	39690.4	39689.9
Q03626	A0A8I6AG69;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	KLFDELVVDKDLFHCLSFTIPR	KLFDELVVDKDLFHC(UniMod:4)LSFTIPR	4	KLFDELVVDKDLFHC(UniMod:4)LSFTIPR4	168532	231694	154809
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	KLFDELVVDKDLFHCVSFTIPR	KLFDELVVDKDLFHC(UniMod:4)VSFTIPR	3	KLFDELVVDKDLFHC(UniMod:4)VSFTIPR3	695317	637540	375710
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	KLFDELVVDKDLFHCVSFTIPR	KLFDELVVDKDLFHC(UniMod:4)VSFTIPR	4	KLFDELVVDKDLFHC(UniMod:4)VSFTIPR4	9.06317e+06	6.15359e+06	6.89703e+06
Q6IE52	Q6IE52	MUG2_RAT	Mug2	Murinoglobulin-2	1	KLFDEPVVDK	KLFDEPVVDK	3	KLFDEPVVDK3	8183.82		6240.64
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	KLFDYFNQDVFR	KLFDYFNQDVFR	3	KLFDYFNQDVFR3	13000.5	13057.1	16429
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	KLFTAESLIGLK	KLFTAESLIGLK	3	KLFTAESLIGLK3	1247.64		3683.04
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	KLGAGQFGEVWMGYYNNSTK	KLGAGQFGEVWMGYYNNSTK	3	KLGAGQFGEVWMGYYNNSTK3	11175.8	13437.7	11799.1
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	KLGGDLLQALNEITESGR	KLGGDLLQALNEITESGR	3	KLGGDLLQALNEITESGR3	11841.1	23215.1	17414.8
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	KLGGSLADSYLDEGFLLDKK	KLGGSLADSYLDEGFLLDKK	4	KLGGSLADSYLDEGFLLDKK4	3828.8		4874.3
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	KLGGTIDDCELVEGLVLTQK	KLGGTIDDC(UniMod:4)ELVEGLVLTQK	3	KLGGTIDDC(UniMod:4)ELVEGLVLTQK3	3188.07	8345.92	4776.55
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	KLGLTQGSFAFIHK	KLGLTQGSFAFIHK	2	KLGLTQGSFAFIHK2	2980.52	1491.92	3192.54
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	KLGLTQGSFAFIHK	KLGLTQGSFAFIHK	3	KLGLTQGSFAFIHK3	38776.4	49317.6	54399.9
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	KLGLTQGSFAFIHK	KLGLTQGSFAFIHK	4	KLGLTQGSFAFIHK4	38019.9	62485.5	69314.7
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	KLGLVFDDVVGIVEIINSR	KLGLVFDDVVGIVEIINSR	3	KLGLVFDDVVGIVEIINSR3		4626.94	7798.11
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	KLGSYEHK	KLGSYEHK	2	KLGSYEHK2			15834.4
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	KLHELTVMQDR	KLHELTVMQDR	3	KLHELTVMQDR3	44909.4	46545	38551.5
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	KLHIYVWYCQNKPR	KLHIYVWYC(UniMod:4)QNKPR	4	KLHIYVWYC(UniMod:4)QNKPR4	6415.01	8063.72	9408.38
Q63663	Q63663	GBP2_RAT	Gbp2	Guanylate-binding protein 2	1	KLIEEQDNIIALK	KLIEEQDNIIALK	3	KLIEEQDNIIALK3	8429.98	8039.22	5058.47
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	KLIHDGCLLWK	KLIHDGC(UniMod:4)LLWK	3	KLIHDGC(UniMod:4)LLWK3	4596.46	6394.98	9354.28
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	KLILDCAR	KLILDC(UniMod:4)AR	2	KLILDC(UniMod:4)AR2	8314.28		
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	KLILQLPK	KLILQLPK	2	KLILQLPK2	34277	61847	53624
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	KLINDYVSK	KLINDYVSK	2	KLINDYVSK2	186012	191255	159082
P05544	P05544	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	1	KLINDYVSNQTQGK	KLINDYVSNQTQGK	3	KLINDYVSNQTQGK3	5943.49	1988.18	5903.5
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	KLITSMR	KLITSMR	2	KLITSMR2	477400	469472	420320
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	KLIVQPNTR	KLIVQPNTR	2	KLIVQPNTR2		1349.38	
A0JPJ7	A0JPJ7	OLA1_RAT	Ola1	Obg-like ATPase 1	1	KLKPEYDIMCK	KLKPEYDIMC(UniMod:4)K	3	KLKPEYDIMC(UniMod:4)K3	3486.51	1535.37	
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	KLLDLLEGLTGTSLPK	KLLDLLEGLTGTSLPK	2	KLLDLLEGLTGTSLPK2		10330	
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	KLLDLLEGLTGTSLPK	KLLDLLEGLTGTSLPK	3	KLLDLLEGLTGTSLPK3	9941.89	30781	15260.6
Q4KM64	Q4KM64	JAGN1_RAT	Jagn1	Protein jagunal homolog 1	1	KLLDSWFTSTQEK	KLLDSWFTSTQEK	3	KLLDSWFTSTQEK3	7640.3	8801.66	9785.19
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	KLLEAER	KLLEAER	2	KLLEAER2	24085	21602.4	27701.2
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	KLLEAQSHFR	KLLEAQSHFR	3	KLLEAQSHFR3	30413.3	42801.4	36812.7
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	KLLEATELK	KLLEATELK	2	KLLEATELK2	49613.7	27185.2	38931.7
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	KLLEEQGIFLR	KLLEEQGIFLR	3	KLLEEQGIFLR3	9641.31	12235.1	8359.27
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	KLLEGGK	KLLEGGK	1	KLLEGGK1			1789.14
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	KLLETHIHNQGLAAIEK	KLLETHIHNQGLAAIEK	4	KLLETHIHNQGLAAIEK4	6321.12		
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	KLLSDFPVVSTATR	KLLSDFPVVSTATR	3	KLLSDFPVVSTATR3	34290.2	43682.8	28261.5
F7FQB8	A0A8I5ZWC6;F7FQB8	F7FQB8_RAT	Kpna4	Karyopherin subunit alpha 4	0	KLLSSDRNPPIDDLIK	KLLSSDRNPPIDDLIK	4	KLLSSDRNPPIDDLIK4	4577.09	4524.52	6391.88
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	KLLSTGDDFGK	KLLSTGDDFGK	2	KLLSTGDDFGK2	4917.24	585.873	7530.74
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	KLLSTGDDFGK	KLLSTGDDFGK	3	KLLSTGDDFGK3		5313.39	7220.31
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	KLLTEEGQK	KLLTEEGQK	2	KLLTEEGQK2	29817.2	25040	24384.4
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	KLLTLEDNELGSGNFGTVK	KLLTLEDNELGSGNFGTVK	3	KLLTLEDNELGSGNFGTVK3		3582.63	1461.96
Q6AXM8	Q6AXM8	PON2_RAT	Pon2	Serum paraoxonase/arylesterase 2	1	KLLVGTLYQR	KLLVGTLYQR	3	KLLVGTLYQR3	2937.75	6335.54	4505.75
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	KLLVSSEDYGR	KLLVSSEDYGR	2	KLLVSSEDYGR2	16029.3	17012	15461.1
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	KLLVSSEDYGR	KLLVSSEDYGR	3	KLLVSSEDYGR3	188095	203173	189988
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	KLMQCLPNSNDVK	KLMQC(UniMod:4)LPNSNDVK	3	KLMQC(UniMod:4)LPNSNDVK3	20134.1	25218.5	22123
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	KLMVEPLQNILIR	KLMVEPLQNILIR	3	KLMVEPLQNILIR3	4625.37	3432.35	2403.67
Q8R491	Q8R491;Q641Z6	EHD3_RAT	Ehd3	EH domain-containing protein 3	0	KLNAFGNAFLNR	KLNAFGNAFLNR	3	KLNAFGNAFLNR3	53022	56582.6	54030.6
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	KLNDALDRLEELK	KLNDALDRLEELK	3	KLNDALDRLEELK3	7439.39	8793.55	7280.82
Q8R491	Q8R491;Q641Z6;Q8R3Z7	EHD3_RAT	Ehd3	EH domain-containing protein 3	0	KLNDLIK	KLNDLIK	2	KLNDLIK2	31932.9	25997.2	33147.7
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	KLNDSDHQSSTSPLMEGTPTIK	KLNDSDHQSSTSPLMEGTPTIK	4	KLNDSDHQSSTSPLMEGTPTIK4	4328.09	2281	5500.93
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	KLNEILQVR	KLNEILQVR	2	KLNEILQVR2	15168.3	18676.1	12783.3
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	KLNELESDLTFK	KLNELESDLTFK	3	KLNELESDLTFK3	14906.1	12805.9	13831.1
Q4KM74	Q4KM74	SC22B_RAT	Sec22b	Vesicle-trafficking protein SEC22b	1	KLNEQSPTR	KLNEQSPTR	2	KLNEQSPTR2			4849.76
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	KLNFQVELLLDK	KLNFQVELLLDK	2	KLNFQVELLLDK2	10067.1	4217.49	
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	KLNFQVELLLDK	KLNFQVELLLDK	3	KLNFQVELLLDK3	47003.1	47702.1	46200.3
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	KLNFQVELLLDKLK	KLNFQVELLLDKLK	3	KLNFQVELLLDKLK3	2329.29	7998.78	8947.99
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	KLNLDGSNYTLLK	KLNLDGSNYTLLK	3	KLNLDGSNYTLLK3	898.443		
A0A8I5ZJ62	A0A8I5ZJ62	A0A8I5ZJ62_RAT	Glipr2	GLI pathogenesis-related 2	1	KLNQEAQQYSEALASTR	KLNQEAQQYSEALASTR	2	KLNQEAQQYSEALASTR2	946.274	1445.39	
A0A8I5ZJ62	A0A8I5ZJ62	A0A8I5ZJ62_RAT	Glipr2	GLI pathogenesis-related 2	1	KLNQEAQQYSEALASTR	KLNQEAQQYSEALASTR	3	KLNQEAQQYSEALASTR3	39390.1	34997.8	44095.8
P04764	M0R5J4;A0A8I6GJ97;A0A8I6ASH7;P04764	ENOA_RAT	Eno1	Alpha-enolase	0	KLNVVEQEK	KLNVVEQEK	2	KLNVVEQEK2	83147.8	42144.2	72640.4
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	KLPCDSGDLEVIEEK	KLPC(UniMod:4)DSGDLEVIEEK	3	KLPC(UniMod:4)DSGDLEVIEEK3	6109.32	4308.45	
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	KLPDIFQGYDR	KLPDIFQGYDR	3	KLPDIFQGYDR3	31195.7	20615.5	23490.8
D4AD37	D4AD37	IMPA3_RAT	Bpnt2	Golgi-resident adenosine 3',5'-bisphosphate 3'-phosphatase	1	KLPDLEK	KLPDLEK	2	KLPDLEK2	109501	87806.9	111343
G3V9L1	G3V9L1	G3V9L1_RAT	Tex2	Testis expressed 2	1	KLPEAPPSEEEEQEAWVNALLGR	KLPEAPPSEEEEQEAWVNALLGR	3	KLPEAPPSEEEEQEAWVNALLGR3	17383.8	8274.25	22181.1
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	KLPEELGR	KLPEELGR	2	KLPEELGR2	524559	527451	448370
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	KLPEELGRDQNTVETLQR	KLPEELGRDQNTVETLQR	3	KLPEELGRDQNTVETLQR3	25850.3	32235.6	
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	KLPEELGRDQNTVETLQR	KLPEELGRDQNTVETLQR	4	KLPEELGRDQNTVETLQR4	11199.8	35531.9	37123.3
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	KLPEMDID	KLPEMDID	1	KLPEMDID1	32683.5	35605.6	23830.5
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	KLPEMDID	KLPEMDID	2	KLPEMDID2	668143	760847	695199
F1M2D4	F1M2D4	F1M2D4_RAT	Arhgap23	Rho GTPase activating protein 23	1	KLPEPLFTDDK	KLPEPLFTDDK	3	KLPEPLFTDDK3	4568.32	5864.52	
A0A0G2JSI4	A0A0G2JSI4	A0A0G2JSI4_RAT	Adgre5	Adhesion G protein-coupled receptor E5	1	KLPEQPTTVHPR	KLPEQPTTVHPR	2	KLPEQPTTVHPR2			4549.3
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	KLPGISDHSLIK	KLPGISDHSLIK	3	KLPGISDHSLIK3	77704.4	68554.7	77184.3
P20069	P20069	MPPA_RAT	Pmpca	Mitochondrial-processing peptidase subunit alpha	1	KLPHELCTLIR	KLPHELC(UniMod:4)TLIR	3	KLPHELC(UniMod:4)TLIR3	31272.9	35449.1	14263.1
Q5XIP6	Q5XIP6	FEN1_RAT	Fen1	Flap endonuclease 1	1	KLPIQEFHLSR	KLPIQEFHLSR	3	KLPIQEFHLSR3	30682.9	7911.82	
Q64566	Q8R4C1;Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	0	KLPIVETLGCCNVICSDK	KLPIVETLGC(UniMod:4)C(UniMod:4)NVIC(UniMod:4)SDK	3	KLPIVETLGC(UniMod:4)C(UniMod:4)NVIC(UniMod:4)SDK3	59154.7	55525.4	62159.4
D3ZFJ3	D3ZFJ3	3BP1_RAT	Sh3bp1	SH3 domain-binding protein 1	1	KLPLMALSTAMAESFK	KLPLMALSTAMAESFK	3	KLPLMALSTAMAESFK3	2805	3129.9	4162.81
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	KLPLQANFYPMPVMAYIQDSQR	KLPLQANFYPMPVMAYIQDSQR	3	KLPLQANFYPMPVMAYIQDSQR3	17387.5	15167.2	17258
D3ZL95	D3ZL95	D3ZL95_RAT	Usp40	ubiquitinyl hydrolase 1	1	KLPPFLTISLLR	KLPPFLTISLLR	3	KLPPFLTISLLR3		2831.72	699.289
Q75Q40	Q75Q40	TOM40_RAT	Tomm40	Mitochondrial import receptor subunit TOM40 homolog	1	KLPPLPLTLSLCAFLNHR	KLPPLPLTLSLC(UniMod:4)AFLNHR	4	KLPPLPLTLSLC(UniMod:4)AFLNHR4	1935.62	5650.83	4043.54
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	KLPPVLAIQLK	KLPPVLAIQLK	2	KLPPVLAIQLK2	55598.2	54899.8	39181.2
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	KLPPVLAIQLK	KLPPVLAIQLK	3	KLPPVLAIQLK3	82008	90976	87341.2
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	KLPQSASPVSAK	KLPQSASPVSAK	2	KLPQSASPVSAK2	13924.7	14489.7	15341
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	KLPQSASPVSAK	KLPQSASPVSAK	3	KLPQSASPVSAK3	20734.5	27155.2	35762.1
A0A8I5ZLP5	A0A8I5ZLP5	A0A8I5ZLP5_RAT	Iqcb1	IQ motif containing B1	1	KLPSAVIALQR	KLPSAVIALQR	3	KLPSAVIALQR3	1983.72	2059.18	3278.97
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	KLPSDTEKEDR	KLPSDTEKEDR	2	KLPSDTEKEDR2			24426.8
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	KLPSDTEKEDR	KLPSDTEKEDR	3	KLPSDTEKEDR3			20773.7
Q00438	Q00438	PTBP1_RAT	Ptbp1	Polypyrimidine tract-binding protein 1	1	KLPSDVTEGEVISLGLPFGK	KLPSDVTEGEVISLGLPFGK	3	KLPSDVTEGEVISLGLPFGK3	28152.6	32777.3	26654.8
Q5U204	Q5U204	LTOR3_RAT	Lamtor3	Ragulator complex protein LAMTOR3	1	KLPSVEGLHAIVVSDR	KLPSVEGLHAIVVSDR	3	KLPSVEGLHAIVVSDR3	24302.8	5633.1	
Q5U204	Q5U204	LTOR3_RAT	Lamtor3	Ragulator complex protein LAMTOR3	1	KLPSVEGLHAIVVSDR	KLPSVEGLHAIVVSDR	4	KLPSVEGLHAIVVSDR4	15282.5		8490.36
Q5U204	Q5U204	LTOR3_RAT	Lamtor3	Ragulator complex protein LAMTOR3	1	KLPSVEGLHAIVVSDRDGVPVIK	KLPSVEGLHAIVVSDRDGVPVIK	4	KLPSVEGLHAIVVSDRDGVPVIK4	17628.7	18445.8	11494.2
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	KLPTDLPADTGILHLSK	KLPTDLPADTGILHLSK	2	KLPTDLPADTGILHLSK2	245883	306916	264841
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	KLPTDLPADTGILHLSK	KLPTDLPADTGILHLSK	3	KLPTDLPADTGILHLSK3	6.54925e+06	7.16566e+06	6.66953e+06
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	KLPTDLPADTGILHLSK	KLPTDLPADTGILHLSK	4	KLPTDLPADTGILHLSK4	6.89301e+06	7.7797e+06	7.82914e+06
Q9Z0J5	Q9Z0J5	TRXR2_RAT	Txnrd2	Thioredoxin reductase 2, mitochondrial	1	KLPTNQLQVTWEDLASGK	KLPTNQLQVTWEDLASGK	3	KLPTNQLQVTWEDLASGK3		8497.53	3231.4
P0C0A1	P0C0A1	VPS25_RAT	Vps25	Vacuolar protein-sorting-associated protein 25	1	KLPVESIQIVLEELR	KLPVESIQIVLEELR	3	KLPVESIQIVLEELR3	9921.56	4540.84	14152.6
P0C0A1	P0C0A1	VPS25_RAT	Vps25	Vacuolar protein-sorting-associated protein 25	1	KLPVESIQIVLEELRK	KLPVESIQIVLEELRK	3	KLPVESIQIVLEELRK3	8029.61	2694.63	
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	KLPVGFTFSFPCR	KLPVGFTFSFPC(UniMod:4)R	2	KLPVGFTFSFPC(UniMod:4)R2	36833.2		26825.8
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	KLPVGFTFSFPCR	KLPVGFTFSFPC(UniMod:4)R	3	KLPVGFTFSFPC(UniMod:4)R3	295455	273321	183206
D4A3E8	D4A3E8	D4A3E8_RAT	Mrps27	Mitochondrial ribosomal protein S27	1	KLPVSSLSISR	KLPVSSLSISR	3	KLPVSSLSISR3	7882.29	2804.16	3462.87
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	KLPVTFEDKK	KLPVTFEDKK	3	KLPVTFEDKK3	11018.6	7919.76	15748.2
Q62812	Q63862;Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	KLQAQMK	KLQAQMK	2	KLQAQMK2	12832.8		23488.8
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	KLQDQSNIQR	KLQDQSNIQR	2	KLQDQSNIQR2	175416	170182	196860
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	KLQDQSNIQR	KLQDQSNIQR	3	KLQDQSNIQR3	301719	341214	342187
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	KLQDYNVGGK	KLQDYNVGGK	2	KLQDYNVGGK2	15358.2	20737.6	16187.4
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	KLQEAEANLR	KLQEAEANLR	2	KLQEAEANLR2	12788	15514.9	12407.6
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	KLQEAEANLR	KLQEAEANLR	3	KLQEAEANLR3	95724.9	114028	95945.1
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	KLQEAEANLRK	KLQEAEANLRK	3	KLQEAEANLRK3	18540.2	33742.6	33249.3
A0JPM9	A0JPM9	EIF3J_RAT	Eif3j	Eukaryotic translation initiation factor 3 subunit J	1	KLQEESDLELAK	KLQEESDLELAK	2	KLQEESDLELAK2	3009.1	1329.88	
A0JPM9	A0JPM9	EIF3J_RAT	Eif3j	Eukaryotic translation initiation factor 3 subunit J	1	KLQEESDLELAK	KLQEESDLELAK	3	KLQEESDLELAK3	4952.02	1129.67	3452.4
Q6AYS6	Q6AYS6	SNX17_RAT	Snx17	Sorting nexin-17	1	KLQEFELPYVSVTSLR	KLQEFELPYVSVTSLR	3	KLQEFELPYVSVTSLR3	4870.74	2060.72	
D3ZCK4	D3ZCK4	D3ZCK4_RAT	Def6	DEF6 guanine nucleotide exchange factor	1	KLQELELLQEAQR	KLQELELLQEAQR	3	KLQELELLQEAQR3	4245.3	9688.57	7771.03
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	KLQENLK	KLQENLK	2	KLQENLK2	17471.7	12354.5	
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	KLQEQEVFFK	KLQEQEVFFK	2	KLQEQEVFFK2	2021.96	1736.11	4228.21
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	KLQEQEVFFK	KLQEQEVFFK	3	KLQEQEVFFK3	22049.3	22976.7	22069.3
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	KLQEQLGK	KLQEQLGK	2	KLQEQLGK2	5653.52	9209.76	
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	KLQESTQTVQSLHGSTR	KLQESTQTVQSLHGSTR	3	KLQESTQTVQSLHGSTR3	3105.57	3652.1	5838.42
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	KLQESTQTVQSLHGSTR	KLQESTQTVQSLHGSTR	4	KLQESTQTVQSLHGSTR4	10984.5	6911.93	12168.9
D3Z9L0	D3Z9L0	D3Z9L0_RAT	Agk	Acylglycerol kinase, mitochondrial	1	KLQFFCDPR	KLQFFC(UniMod:4)DPR	3	KLQFFC(UniMod:4)DPR3			3679.98
A0A8I5ZVY6	A0A8I5ZVY6	A0A8I5ZVY6_RAT	Rint1	RAD50 interactor 1	1	KLQFLELQK	KLQFLELQK	3	KLQFLELQK3		1877.59	
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	KLQFLFELPSR	KLQFLFELPSR	3	KLQFLFELPSR3	2517.12	2635.99	6808.61
Q6MGC4	Q6MGC4	Q6MGC4_RAT	Pfdn6	Prefoldin subunit 6	1	KLQGEVEK	KLQGEVEK	2	KLQGEVEK2			20286.6
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	KLQGIMELLESIPKPEPVTDVSAPAR	KLQGIMELLESIPKPEPVTDVSAPAR	4	KLQGIMELLESIPKPEPVTDVSAPAR4	8792.8	3812.99	6732.21
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	KLQLELNQER	KLQLELNQER	3	KLQLELNQER3			5378.56
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	KLQNMLEEQLTK	KLQNMLEEQLTK	3	KLQNMLEEQLTK3	6520.67	6622.54	6472.85
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	KLQPDQQVVINCAIIR	KLQPDQQVVINC(UniMod:4)AIIR	2	KLQPDQQVVINC(UniMod:4)AIIR2	7482.54	8005.4	6002.67
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	KLQPDQQVVINCAIIR	KLQPDQQVVINC(UniMod:4)AIIR	3	KLQPDQQVVINC(UniMod:4)AIIR3	96536.9	104695	113260
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	KLQSEHANSEATINQLR	KLQSEHANSEATINQLR	3	KLQSEHANSEATINQLR3	1029.85	898.572	
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	KLQTCLQALELAVDQK	KLQTC(UniMod:4)LQALELAVDQK	3	KLQTC(UniMod:4)LQALELAVDQK3	4929.29	5730.13	2227.34
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	KLRDEINLAK	KLRDEINLAK	3	KLRDEINLAK3	179094	189322	199482
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	KLRPLYDIPYMFEAR	KLRPLYDIPYMFEAR	3	KLRPLYDIPYMFEAR3	5618.66	9877.6	5001.17
P38718	P38718	MPC2_RAT	Mpc2	Mitochondrial pyruvate carrier 2	1	KLRPLYNHPAGPR	KLRPLYNHPAGPR	3	KLRPLYNHPAGPR3	17434.3	13462.7	5934.99
P38718	P38718	MPC2_RAT	Mpc2	Mitochondrial pyruvate carrier 2	1	KLRPLYNHPAGPR	KLRPLYNHPAGPR	4	KLRPLYNHPAGPR4	107302	130510	101122
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	KLSDDNTIGQEEIQQR	KLSDDNTIGQEEIQQR	2	KLSDDNTIGQEEIQQR2	6903.48	2719.76	7313.28
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	KLSDDNTIGQEEIQQR	KLSDDNTIGQEEIQQR	3	KLSDDNTIGQEEIQQR3	214501	257174	253455
Q5U3Z0	Q5U3Z0	CF298_RAT	Cfap298	Cilia- and flagella-associated protein 298	1	KLSDYVGK	KLSDYVGK	2	KLSDYVGK2	9319.81	41324.8	39041.5
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	KLSELLR	KLSELLR	2	KLSELLR2	48057.8	77538.8	93608.4
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	KLSGCSQDCEDLK	KLSGC(UniMod:4)SQDC(UniMod:4)EDLK	3	KLSGC(UniMod:4)SQDC(UniMod:4)EDLK3	4372.37	5936.86	2284.33
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	KLSISEQNAQR	KLSISEQNAQR	2	KLSISEQNAQR2	34608.1	26943	15714.6
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	KLSISEQNAQR	KLSISEQNAQR	3	KLSISEQNAQR3	129775	232613	234131
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	KLSLPTDLKPDLDVK	KLSLPTDLKPDLDVK	3	KLSLPTDLKPDLDVK3	9802.85	10395.6	8919.2
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	KLSLQTFQTFK	KLSLQTFQTFK	2	KLSLQTFQTFK2	4177.59	5790.31	3027.62
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	KLSLQTFQTFK	KLSLQTFQTFK	3	KLSLQTFQTFK3	15525.3	5640.18	8690.26
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	KLSMYGVDLHK	KLSMYGVDLHK	3	KLSMYGVDLHK3	20704	19939.7	19971.1
Q4QQT4	Q4QQT4;Q5XI34	2AAB_RAT	Ppp2r1b	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	0	KLSTIALALGVER	KLSTIALALGVER	3	KLSTIALALGVER3	26252.9	31647.6	25953.6
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	KLSTSPFALNLTMLPK	KLSTSPFALNLTMLPK	3	KLSTSPFALNLTMLPK3		6055.51	5192.09
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	KLSVEEFFMDLHNFR	KLSVEEFFMDLHNFR	4	KLSVEEFFMDLHNFR4	4943.35		
Q5XIE8	Q5XIE8	ITM2B_RAT	Itm2b	Integral membrane protein 2B	1	KLTAYLDLNLDK	KLTAYLDLNLDK	3	KLTAYLDLNLDK3	4176.27	9977.34	9765.24
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	KLTEDDLVLLEK	KLTEDDLVLLEK	3	KLTEDDLVLLEK3	4576.76	4243.38	3096.62
P62074	P62074	TIM10_RAT	Timm10	Mitochondrial import inner membrane translocase subunit Tim10	1	KLTELSMQDEELMK	KLTELSMQDEELMK	3	KLTELSMQDEELMK3	4935.64	5657.4	8273.62
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	KLTGMER	KLTGMER	2	KLTGMER2	106798	142492	
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	KLTINPYEISGCPK	KLTINPYEISGC(UniMod:4)PK	3	KLTINPYEISGC(UniMod:4)PK3		3794.68	2250.62
Q6RUV5	Q6RUV5	RAC1_RAT	Rac1	Ras-related C3 botulinum toxin substrate 1	1	KLTPITYPQGLAMAK	KLTPITYPQGLAMAK	3	KLTPITYPQGLAMAK3	44994.6	44569.7	52850.2
Q5U2V8	Q5U2V8	EMC3_RAT	Emc3	ER membrane protein complex subunit 3	1	KLTQEQVSDSQVLIR	KLTQEQVSDSQVLIR	3	KLTQEQVSDSQVLIR3	2229.32	876.394	1478.28
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	KLTVCPESVQPLSSQSLSASSSTGSDPR	KLTVC(UniMod:4)PESVQPLSSQSLSASSSTGSDPR	3	KLTVC(UniMod:4)PESVQPLSSQSLSASSSTGSDPR3	3925.34	4879.29	
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	KLTWLYQLSK	KLTWLYQLSK	3	KLTWLYQLSK3	6560.5	4598.1	
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	KLVAIVDPHIK	KLVAIVDPHIK	2	KLVAIVDPHIK2	4558.96		2135.14
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	KLVAIVDPHIK	KLVAIVDPHIK	3	KLVAIVDPHIK3	47115.9	50969.6	38558.6
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	KLVCLNTK	KLVC(UniMod:4)LNTK	2	KLVC(UniMod:4)LNTK2	19611	26466.2	29290.5
Q68FR2	O08838;O08839;Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	0	KLVDYDSAR	KLVDYDSAR	2	KLVDYDSAR2	1.23745e+06	1.24076e+06	1.22554e+06
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	KLVELLR	KLVELLR	2	KLVELLR2	9572.03	9776.39	6233.23
Q9WVS2	Q9WVS2	OSGEP_RAT	Osgep	tRNA N6-adenosine threonylcarbamoyltransferase	1	KLVELPYTVK	KLVELPYTVK	3	KLVELPYTVK3	7120.74	5971	3173.58
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	KLVEQLTGLISSSPGPPTR	KLVEQLTGLISSSPGPPTR	3	KLVEQLTGLISSSPGPPTR3	6127.34	7198.85	5431.31
D3ZXF9	D3ZXF9	D3ZXF9_RAT	Mrpl12	Mitochondrial ribosomal protein L12	1	KLVESLPQEIK	KLVESLPQEIK	2	KLVESLPQEIK2	2927.36	1869.95	614.171
D3ZXF9	D3ZXF9	D3ZXF9_RAT	Mrpl12	Mitochondrial ribosomal protein L12	1	KLVESLPQEIK	KLVESLPQEIK	3	KLVESLPQEIK3	49121.4	50043.9	46408
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	KLVGSEQAPGR	KLVGSEQAPGR	2	KLVGSEQAPGR2	2018.1		
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	KLVGSEQAPGR	KLVGSEQAPGR	3	KLVGSEQAPGR3	4335.39	13064	
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	KLVHEGPLTWR	KLVHEGPLTWR	3	KLVHEGPLTWR3	4373.08	2812.58	2227.61
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	KLVIIEGDLER	KLVIIEGDLER	2	KLVIIEGDLER2	50766.9	54053.7	43521.6
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	KLVIIEGDLER	KLVIIEGDLER	3	KLVIIEGDLER3	25733.7	42767.1	489588
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	KLVIIEGDLERTEER	KLVIIEGDLERTEER	3	KLVIIEGDLERTEER3			34680.3
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	KLVIIEGDLERTEER	KLVIIEGDLERTEER	4	KLVIIEGDLERTEER4	9404.01	16076.1	20048.4
P04692	P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	1	KLVIIESDLER	KLVIIESDLER	2	KLVIIESDLER2	14091.9	34977.1	20150
P04692	P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	1	KLVIIESDLER	KLVIIESDLER	3	KLVIIESDLER3	86590.2	125559	115939
P09495	P58775;P09495;A0A8I5YC74	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	0	KLVILEGELER	KLVILEGELER	2	KLVILEGELER2	178955	173916	180129
P09495	P58775;P09495;A0A8I5YC74	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	0	KLVILEGELER	KLVILEGELER	3	KLVILEGELER3	57505.6	75787.3	45655.7
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	KLVILEGELERAEER	KLVILEGELERAEER	3	KLVILEGELERAEER3	172536	250711	269039
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	KLVILEGELERAEER	KLVILEGELERAEER	4	KLVILEGELERAEER4	62429.3	71910.2	73341.4
P58775	P58775;A0A8I5YC74	TPM2_RAT	Tpm2	Tropomyosin beta chain	0	KLVILEGELERSEER	KLVILEGELERSEER	3	KLVILEGELERSEER3	30104.2	43382	42148.9
P26051	P26051	CD44_RAT	Cd44	CD44 antigen	1	KLVINSGNGTVEDR	KLVINSGNGTVEDR	2	KLVINSGNGTVEDR2	3351.41	3020	4586.67
P26051	P26051	CD44_RAT	Cd44	CD44 antigen	1	KLVINSGNGTVEDR	KLVINSGNGTVEDR	3	KLVINSGNGTVEDR3	25386.5	42148.7	45112.7
A0A8I6GH88	A0A8I6GH88	A0A8I6GH88_RAT	Fkbp2	peptidylprolyl isomerase	1	KLVIPSELGYGER	KLVIPSELGYGER	3	KLVIPSELGYGER3	5345.7	9201.65	6044.19
P61589	P61589;Q5XIM3;A0A8I6AN62	RHOA_RAT	Rhoa	Transforming protein RhoA	0	KLVIVGDGACGK	KLVIVGDGAC(UniMod:4)GK	2	KLVIVGDGAC(UniMod:4)GK2	34615.5	28769	25308.4
P61589	P61589;Q5XIM3;A0A8I6AN62	RHOA_RAT	Rhoa	Transforming protein RhoA	0	KLVIVGDGACGK	KLVIVGDGAC(UniMod:4)GK	3	KLVIVGDGAC(UniMod:4)GK3	94568.8	115761	104264
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	KLVIYLEHNLEK	KLVIYLEHNLEK	3	KLVIYLEHNLEK3	2945.29	4046.86	
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	KLVPQLVR	KLVPQLVR	2	KLVPQLVR2	11979.8	14017	12603.9
Q9JHW0	Q9JHW0	PSB7_RAT	Psmb7	Proteasome subunit beta type-7	1	KLVSEAIAAGIFNDLGSGSNIDLCVISK	KLVSEAIAAGIFNDLGSGSNIDLC(UniMod:4)VISK	3	KLVSEAIAAGIFNDLGSGSNIDLC(UniMod:4)VISK3	3603.87	5570.64	5323.67
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	KLVVATEK	KLVVATEK	2	KLVVATEK2	5756.82	15634.1	17711.5
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	KLVVENVDVLTQMR	KLVVENVDVLTQMR	3	KLVVENVDVLTQMR3	36355.1	45954.6	49553.1
Q9QX79	Q9QX79	FETUB_RAT	Fetub	Fetuin-B	1	KLVVLPFPGK	KLVVLPFPGK	2	KLVVLPFPGK2	277045	267350	261324
P62747	P62747	RHOB_RAT	Rhob	Rho-related GTP-binding protein RhoB	1	KLVVVGDGACGK	KLVVVGDGAC(UniMod:4)GK	3	KLVVVGDGAC(UniMod:4)GK3	11794.1	8025.88	13089.2
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KLVWVPSTK	KLVWVPSTK	2	KLVWVPSTK2	1.65423e+06	2.02815e+06	1.85509e+06
P62944	P52303;P62944	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	KLVYLYLMNYAK	KLVYLYLMNYAK	2	KLVYLYLMNYAK2	3410.02	5546.28	
P62944	P52303;P62944	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	KLVYLYLMNYAK	KLVYLYLMNYAK	3	KLVYLYLMNYAK3	28888.3	27855.7	26775.5
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	KLVYVYLVR	KLVYVYLVR	2	KLVYVYLVR2	2034.97	6724.3	
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	KLWAYLTVNQLLTER	KLWAYLTVNQLLTER	2	KLWAYLTVNQLLTER2	18660.7	19645.7	10790.5
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	KLWAYLTVNQLLTER	KLWAYLTVNQLLTER	3	KLWAYLTVNQLLTER3	528793	434806	346237
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	KLWAYLTVNQLLTERSLAPTAASK	KLWAYLTVNQLLTERSLAPTAASK	4	KLWAYLTVNQLLTERSLAPTAASK4	16424	11879	9825.98
F1M171	F1M171	F1M171_RAT	Leg1	Similar to RIKEN cDNA 2310057J18	1	KLWDAHTSSLEYPTR	KLWDAHTSSLEYPTR	3	KLWDAHTSSLEYPTR3	11769.9	11522	14610
F1M171	F1M171	F1M171_RAT	Leg1	Similar to RIKEN cDNA 2310057J18	1	KLWDAHTSSLEYPTR	KLWDAHTSSLEYPTR	4	KLWDAHTSSLEYPTR4		32260	28085
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	KLWEEQQAAAK	KLWEEQQAAAK	2	KLWEEQQAAAK2		1345.46	4603.98
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	KLWEEQQAAAK	KLWEEQQAAAK	3	KLWEEQQAAAK3	10271.6	8997.41	9494.78
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	KLYDYCNIPLCASLSSFECGKPQVEPK	KLYDYC(UniMod:4)NIPLC(UniMod:4)ASLSSFEC(UniMod:4)GKPQVEPK	4	KLYDYC(UniMod:4)NIPLC(UniMod:4)ASLSSFEC(UniMod:4)GKPQVEPK4	281522	262224	276559
Q4KM74	Q4KM74	SC22B_RAT	Sec22b	Vesicle-trafficking protein SEC22b	1	KLYIDSR	KLYIDSR	2	KLYIDSR2	10711.8	3457.61	
D4A3X7	D4A3X7	D4A3X7_RAT	Snx33	Sorting nexin	1	KMDDSVLQLSTVAAELVR	KMDDSVLQLSTVAAELVR	3	KMDDSVLQLSTVAAELVR3	3126.75		3141.99
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KMEDGVGCLETAEEAK	KMEDGVGC(UniMod:4)LETAEEAK	2	KMEDGVGC(UniMod:4)LETAEEAK2	154980	201280	183693
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KMEDGVGCLETAEEAK	KMEDGVGC(UniMod:4)LETAEEAK	3	KMEDGVGC(UniMod:4)LETAEEAK3	40480.2	36144.7	39347.9
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KMEDGVGCLETAEEAKR	KMEDGVGC(UniMod:4)LETAEEAKR	2	KMEDGVGC(UniMod:4)LETAEEAKR2	2055.82	3388.71	2385.18
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KMEDGVGCLETAEEAKR	KMEDGVGC(UniMod:4)LETAEEAKR	3	KMEDGVGC(UniMod:4)LETAEEAKR3	210536	250697	211699
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KMEDGVGCLETAEEAKR	KMEDGVGC(UniMod:4)LETAEEAKR	4	KMEDGVGC(UniMod:4)LETAEEAKR4	7287.28	10394.5	10939.8
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	KMEMGDEVR	KMEMGDEVR	2	KMEMGDEVR2	104611	109631	83686.3
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	KMENDFEQK	KMENDFEQK	2	KMENDFEQK2	14800.1	28343.7	28382.3
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	KMENDFEQK	KMENDFEQK	3	KMENDFEQK3	14125.7	21593.3	18912.1
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	KMEVFFPK	KMEVFFPK	2	KMEVFFPK2	64641.9	57199.5	70833.2
P0DP29;P0DP30;P0DP31	P0DP30;Q5U206;P0DP29;P0DP31	CALM1_RAT;CALM2_RAT;CALM3_RAT	Calm1;Calm2;Calm3	Calmodulin-1	0	KMKDTDSEEEIR	KMKDTDSEEEIR	3	KMKDTDSEEEIR3	2005.24	6809.03	
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	KMLDYEMLQR	KMLDYEMLQR	3	KMLDYEMLQR3	26257.8	55047.2	44293.3
P70550	P70550	RAB8B_RAT	Rab8b	Ras-related protein Rab-8B	1	KMNDSNSSGAGGPVK	KMNDSNSSGAGGPVK	3	KMNDSNSSGAGGPVK3			8594.18
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	KMNVSPDVNYEELAR	KMNVSPDVNYEELAR	3	KMNVSPDVNYEELAR3	21776.7	32119.9	28097.6
D3ZJF8	D3ZJF8;F7EZQ4	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	0	KMPDGSMFVHQK	KMPDGSMFVHQK	2	KMPDGSMFVHQK2	19464	17707.7	19262
D3ZJF8	D3ZJF8;F7EZQ4	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	0	KMPDGSMFVHQK	KMPDGSMFVHQK	3	KMPDGSMFVHQK3	897840	522609	398687
D3ZIK8	D3ZIK8	D3ZIK8_RAT	Fbxo38	F-box protein 38	1	KMPDVEQLYGLHPR	KMPDVEQLYGLHPR	3	KMPDVEQLYGLHPR3		1372.57	
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	KMPGTAESSEENSDR	KMPGTAESSEENSDR	3	KMPGTAESSEENSDR3	4341.26		2868.77
P35284	P35284	RAB12_RAT	Rab12	Ras-related protein Rab-12	1	KMPLDVLR	KMPLDVLR	2	KMPLDVLR2	12492.6	7354.41	10362.6
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	KMPLLLIDGK	KMPLLLIDGK	2	KMPLLLIDGK2	271751	236845	281043
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	KMPLTEPLR	KMPLTEPLR	2	KMPLTEPLR2	16224.5	12702.3	5651.23
Q62753	Q62753;P61765	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	0	KMPQYQK	KMPQYQK	1	KMPQYQK1	6142.26	4574.4	1961.18
Q62753	Q62753;P61765	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	0	KMPQYQK	KMPQYQK	2	KMPQYQK2	293639	162544	234632
A0A0G2K1P3	A0A0G2K1P3	A0A0G2K1P3_RAT	Bnip2	BCL2 interacting protein 2	1	KMPSLGWLR	KMPSLGWLR	2	KMPSLGWLR2	13170	8405.11	10500.5
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KMQQNIQELEEQLEEEESAR	KMQQNIQELEEQLEEEESAR	3	KMQQNIQELEEQLEEEESAR3	8925.61	10369.4	6676.23
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KMQQNIQELEEQLEEEESARQK	KMQQNIQELEEQLEEEESARQK	4	KMQQNIQELEEQLEEEESARQK4	8131.6	5258.41	15596.1
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	KMVEEILK	KMVEEILK	2	KMVEEILK2	149985	31469.6	234651
P29147	P29147	BDH_RAT	Bdh1	D-beta-hydroxybutyrate dehydrogenase, mitochondrial	1	KMWDELPEVVR	KMWDELPEVVR	3	KMWDELPEVVR3	9961.2	12437.5	13407.2
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	KMYESFIESLPFLK	KMYESFIESLPFLK	3	KMYESFIESLPFLK3	33812.3	34210	36423.2
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	KNAEELQTK	KNAEELQTK	2	KNAEELQTK2			1.25362e+06
Q9QZM5	Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	1	KNDDGWFEGVCNR	KNDDGWFEGVC(UniMod:4)NR	2	KNDDGWFEGVC(UniMod:4)NR2	4756.18	990.942	2731.9
Q9QZM5	Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	1	KNDDGWFEGVCNR	KNDDGWFEGVC(UniMod:4)NR	3	KNDDGWFEGVC(UniMod:4)NR3	19607.2	17443.9	21018.4
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	KNDMANMYVLLR	KNDMANMYVLLR	3	KNDMANMYVLLR3	2179.88		3651.99
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	KNEFQGELQK	KNEFQGELQK	3	KNEFQGELQK3	12613.8	13243.7	
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	KNEFSFEDPLQK	KNEFSFEDPLQK	2	KNEFSFEDPLQK2	41762.6	21028.2	35333.4
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	KNEFSFEDPLQK	KNEFSFEDPLQK	3	KNEFSFEDPLQK3	114584	102058	94024.7
P62628	P62628	DLRB1_RAT	Dynlrb1	Dynein light chain roadblock-type 1	1	KNEIMVAPDKDYFLIVIQNPTE	KNEIMVAPDKDYFLIVIQNPTE	3	KNEIMVAPDKDYFLIVIQNPTE3	6375.69	16912.7	
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	KNFESLSEAFSVASAAAALSQNR	KNFESLSEAFSVASAAAALSQNR	3	KNFESLSEAFSVASAAAALSQNR3	52846.8	22920.4	45428.9
Q4G063	Q4G063	CREL2_RAT	Creld2	Protein disulfide isomerase Creld2	1	KNFGGGNTAWEEK	KNFGGGNTAWEEK	3	KNFGGGNTAWEEK3	5133.47	5744.2	
Q9Z0V6	Q9Z0V6	PRDX3_RAT	Prdx3	Thioredoxin-dependent peroxide reductase, mitochondrial	1	KNGGLGHMNITLLSDLTK	KNGGLGHMNITLLSDLTK	3	KNGGLGHMNITLLSDLTK3	10027.1	8297.36	
Q9Z0V6	Q9Z0V6	PRDX3_RAT	Prdx3	Thioredoxin-dependent peroxide reductase, mitochondrial	1	KNGGLGHMNITLLSDLTK	KNGGLGHMNITLLSDLTK	4	KNGGLGHMNITLLSDLTK4	13557.7	9870.15	14355.8
P97578	P97578	FEZ2_RAT	Fez2	Fasciculation and elongation protein zeta-2	1	KNGPPSVEDLQILTK	KNGPPSVEDLQILTK	3	KNGPPSVEDLQILTK3	4466.22		3213.79
Q6IFU8	Q6IFU7;Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	0	KNHEEEMNALR	KNHEEEMNALR	3	KNHEEEMNALR3	6893.57	5110.61	6883.86
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	KNIDSNPYDTDK	KNIDSNPYDTDK	3	KNIDSNPYDTDK3	4132.93	3165.35	3402.18
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	KNIEIYIQR	KNIEIYIQR	3	KNIEIYIQR3	4200.07	5483.98	
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	KNIFESFVDYVAVEQLDGDNK	KNIFESFVDYVAVEQLDGDNK	3	KNIFESFVDYVAVEQLDGDNK3	3504.71	5726.44	
P45592	P45592;A0A8I6G734	COF1_RAT	Cfl1	Cofilin-1	0	KNIILEEGK	KNIILEEGK	2	KNIILEEGK2	206148	205078	164470
P45592	P45592	COF1_RAT	Cfl1	Cofilin-1	1	KNIILEEGKEILVGDVGQTVDDPYTTFVK	KNIILEEGKEILVGDVGQTVDDPYTTFVK	4	KNIILEEGKEILVGDVGQTVDDPYTTFVK4	48145.8	30906.8	32115.3
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	KNIIQLSAQEPR	KNIIQLSAQEPR	3	KNIIQLSAQEPR3	7161.12	9123.55	8567.27
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	KNILDSKPAANK	KNILDSKPAANK	3	KNILDSKPAANK3	93077.2	73518.1	81633.8
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	KNILLTIGSYK	KNILLTIGSYK	3	KNILLTIGSYK3	2275.66	2860.27	7055.56
Q3T1J9	Q3T1J9;A0A8I6AAQ1;A0A8I5ZK61	MOB1A_RAT	Mob1a	MOB kinase activator 1A	0	KNIPEGSHQYELLK	KNIPEGSHQYELLK	3	KNIPEGSHQYELLK3	20923.3	9648.92	9254.36
Q3T1J9	Q3T1J9;A0A8I6AAQ1;A0A8I5ZK61	MOB1A_RAT	Mob1a	MOB kinase activator 1A	0	KNIPEGSHQYELLK	KNIPEGSHQYELLK	4	KNIPEGSHQYELLK4	12321.8	8706.44	13686.5
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	KNIPQPTNALK	KNIPQPTNALK	3	KNIPQPTNALK3	24983.5	24033	25683.9
P13086	P13086	SUCA_RAT	Suclg1	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial	1	KNIYIDK	KNIYIDK	2	KNIYIDK2	8304.44	9859.15	9945.82
P47875	P47875	CSRP1_RAT	Csrp1	Cysteine and glycine-rich protein 1	1	KNLDSTTVAVHGEEIYCK	KNLDSTTVAVHGEEIYC(UniMod:4)K	3	KNLDSTTVAVHGEEIYC(UniMod:4)K3	10227.5	12263.4	14339.8
P47875	P47875	CSRP1_RAT	Csrp1	Cysteine and glycine-rich protein 1	1	KNLDSTTVAVHGEEIYCK	KNLDSTTVAVHGEEIYC(UniMod:4)K	4	KNLDSTTVAVHGEEIYC(UniMod:4)K4	8705.77	10704.4	10431.2
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	KNLFDNQGNASPPAGPSNMSK	KNLFDNQGNASPPAGPSNMSK	3	KNLFDNQGNASPPAGPSNMSK3	263279	334710	320289
F7FPK8	F7FPK8	F7FPK8_RAT	Lman2	Lectin, mannose-binding 2	1	KNLHGDGIALWYTR	KNLHGDGIALWYTR	3	KNLHGDGIALWYTR3	21491.7	19703.4	29205.8
F7FPK8	F7FPK8	F7FPK8_RAT	Lman2	Lectin, mannose-binding 2	1	KNLHGDGIALWYTR	KNLHGDGIALWYTR	4	KNLHGDGIALWYTR4	31630.5	29470.4	24759.1
P62828	Q8K586;P62828;Q66H11	RAN_RAT	Ran	GTP-binding nuclear protein Ran	0	KNLQYYDISAK	KNLQYYDISAK	3	KNLQYYDISAK3			9473.04
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	KNLSPGAVESDVR	KNLSPGAVESDVR	3	KNLSPGAVESDVR3	45085.7	63545.7	35408.4
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	KNLTQDEMQR	KNLTQDEMQR	3	KNLTQDEMQR3	11802.5	16901.4	16601.4
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	KNLVEQHIQDIVVHYTFNK	KNLVEQHIQDIVVHYTFNK	4	KNLVEQHIQDIVVHYTFNK4	4350.63	7908.82	10174.2
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	KNMEASVK	KNMEASVK	2	KNMEASVK2			39497.1
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	KNNADTLYEVVCLESESER	KNNADTLYEVVC(UniMod:4)LESESER	3	KNNADTLYEVVC(UniMod:4)LESESER3	4615.45		3880.96
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	KNNADTLYEVVCLESESERER	KNNADTLYEVVC(UniMod:4)LESESERER	3	KNNADTLYEVVC(UniMod:4)LESESERER3		5529.14	
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	KNNADTLYEVVCLESESERER	KNNADTLYEVVC(UniMod:4)LESESERER	4	KNNADTLYEVVC(UniMod:4)LESESERER4	22745.2	21302.3	11706.8
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	KNNIHCNTIAPNAGSR	KNNIHC(UniMod:4)NTIAPNAGSR	3	KNNIHC(UniMod:4)NTIAPNAGSR3	17875	11102.5	12198.7
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	KNNIHCNTIAPNAGSR	KNNIHC(UniMod:4)NTIAPNAGSR	4	KNNIHC(UniMod:4)NTIAPNAGSR4	22279.7	20532.4	22397.3
Q6P7Q1	Q6P7Q1	BABA2_RAT	Babam2	BRISC and BRCA1-A complex member 2	1	KNNWTGEFSAR	KNNWTGEFSAR	3	KNNWTGEFSAR3	16280.1	22697.8	4131.21
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	KNPALWDLGIIQAK	KNPALWDLGIIQAK	3	KNPALWDLGIIQAK3	31591.4	38286	33056.2
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	KNPDDYTPVNIDGAHAQR	KNPDDYTPVNIDGAHAQR	3	KNPDDYTPVNIDGAHAQR3	4455.97		5190.05
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	KNPDDYTPVNIDGAHAQR	KNPDDYTPVNIDGAHAQR	4	KNPDDYTPVNIDGAHAQR4	8987.1	8182.9	9185.04
P20673	P20673	ARLY_RAT	Asl	Argininosuccinate lyase	1	KNPDSLELIR	KNPDSLELIR	3	KNPDSLELIR3	17826.7	14262.8	6913.59
Q4KM73	Q4KM73	KCY_RAT	Cmpk1	UMP-CMP kinase	1	KNPDSQYGELIEK	KNPDSQYGELIEK	2	KNPDSQYGELIEK2	5049.12	5538.79	4675.43
Q4KM73	Q4KM73	KCY_RAT	Cmpk1	UMP-CMP kinase	1	KNPDSQYGELIEK	KNPDSQYGELIEK	3	KNPDSQYGELIEK3	25266.8	31977.8	28933.8
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	KNPFVYK	KNPFVYK	2	KNPFVYK2	60983.1	46250.6	50352.8
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	KNPGGWWEGELQAR	KNPGGWWEGELQAR	3	KNPGGWWEGELQAR3	20336.3	19982.3	24602.6
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	KNPGMGNGDDEAAELMQQVK	KNPGMGNGDDEAAELMQQVK	3	KNPGMGNGDDEAAELMQQVK3	160372	253153	143400
P36953	P36953	AFAM_RAT	Afm	Afamin	1	KNPLSCYR	KNPLSC(UniMod:4)YR	2	KNPLSC(UniMod:4)YR2	85273	80980.3	65159.1
P22273	P22273	IL6RA_RAT	Il6r	Interleukin-6 receptor subunit alpha	1	KNPLVNAFCEWHPSSTPSPTTK	KNPLVNAFC(UniMod:4)EWHPSSTPSPTTK	3	KNPLVNAFC(UniMod:4)EWHPSSTPSPTTK3	13450	17023.1	9951.84
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	KNPMVETLGTVLQLK	KNPMVETLGTVLQLK	2	KNPMVETLGTVLQLK2	14516.7	16256.4	15692.7
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	KNPMVETLGTVLQLK	KNPMVETLGTVLQLK	3	KNPMVETLGTVLQLK3	160931	161796	181535
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	KNPNYNL	KNPNYNL	2	KNPNYNL2	15709.7	13867.7	19547
Q64303	Q64303;Q62829	PAK2_RAT	Pak2	Serine/threonine-protein kinase PAK 2	0	KNPQAVLDVLK	KNPQAVLDVLK	2	KNPQAVLDVLK2	13610.7	9752.61	7833.31
Q64303	Q64303;Q62829	PAK2_RAT	Pak2	Serine/threonine-protein kinase PAK 2	0	KNPQAVLDVLK	KNPQAVLDVLK	3	KNPQAVLDVLK3	78879.7	65063.7	80279.8
Q5BK21	Q5BK21	Q5BK21_RAT	Tm7sf2	Transmembrane 7 superfamily member 2	1	KNPSDPSVAGLETIPTATGR	KNPSDPSVAGLETIPTATGR	3	KNPSDPSVAGLETIPTATGR3	9810.17	7848.39	12031.1
Q9EPF2	Q9EPF2	MUC18_RAT	Mcam	Cell surface glycoprotein MUC18	1	KNPSTEEMEEESTDENGLLSLEPAQK	KNPSTEEMEEESTDENGLLSLEPAQK	3	KNPSTEEMEEESTDENGLLSLEPAQK3	3196.17	3899.97	2768.13
Q5M7T1	Q5M7T1	CIAO1_RAT	Ciao1	Probable cytosolic iron-sulfur protein assembly protein CIAO1	1	KNQDDFECVTTLEGHENEVK	KNQDDFEC(UniMod:4)VTTLEGHENEVK	3	KNQDDFEC(UniMod:4)VTTLEGHENEVK3	976.538	2353.24	3232.58
Q5M7T1	Q5M7T1	CIAO1_RAT	Ciao1	Probable cytosolic iron-sulfur protein assembly protein CIAO1	1	KNQDDFECVTTLEGHENEVK	KNQDDFEC(UniMod:4)VTTLEGHENEVK	4	KNQDDFEC(UniMod:4)VTTLEGHENEVK4	14615.2	19505.4	32647.8
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	KNQDEESQDPPELLK	KNQDEESQDPPELLK	3	KNQDEESQDPPELLK3	5948.11	5254.96	7222.2
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	KNQELEVVR	KNQELEVVR	2	KNQELEVVR2	22202.9	15548.8	22919.8
G3V6S0	Q9QWN8;G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	0	KNQTLQK	KNQTLQK	2	KNQTLQK2			6209.45
O70351	O70351	HCD2_RAT	Hsd17b10	3-hydroxyacyl-CoA dehydrogenase type-2	1	KNQVHTLEDFQR	KNQVHTLEDFQR	2	KNQVHTLEDFQR2	3861.97	3139.62	
O70351	O70351	HCD2_RAT	Hsd17b10	3-hydroxyacyl-CoA dehydrogenase type-2	1	KNQVHTLEDFQR	KNQVHTLEDFQR	3	KNQVHTLEDFQR3	17857.3	14395.5	27465.6
D4A529	D4A529	D4A529_RAT	She	Src homology 2 domain containing E	1	KNSETGSAAPTPGK	KNSETGSAAPTPGK	3	KNSETGSAAPTPGK3			2690.6
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	KNSVVEASEAAYK	KNSVVEASEAAYK	2	KNSVVEASEAAYK2	15867.1	13778.5	20107.9
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	KNSVVEASEAAYK	KNSVVEASEAAYK	3	KNSVVEASEAAYK3	229053	252502	248025
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	KNVAYHNWR	KNVAYHNWR	3	KNVAYHNWR3	10714.8	14267.5	12914.1
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	KNVFIIGATNRPDIIDPAILR	KNVFIIGATNRPDIIDPAILR	4	KNVFIIGATNRPDIIDPAILR4	11405.8	4313.56	11100.7
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	KNVIQSVLQAIR	KNVIQSVLQAIR	2	KNVIQSVLQAIR2	4128.58	6875.72	6762.67
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	KNVIQSVLQAIR	KNVIQSVLQAIR	3	KNVIQSVLQAIR3	100075	59165.4	55658
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	KNVLGHMQQGGAPSPFDR	KNVLGHMQQGGAPSPFDR	4	KNVLGHMQQGGAPSPFDR4	9638.2	7434.11	7741.98
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	KNVNKPLLDEIVPVYR	KNVNKPLLDEIVPVYR	3	KNVNKPLLDEIVPVYR3	34707.8	49100	41477.2
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	KNVNKPLLDEIVPVYR	KNVNKPLLDEIVPVYR	4	KNVNKPLLDEIVPVYR4	58615.3	70076.5	58773.3
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	KNVSINTVTYEWAPPVQNQALAR	KNVSINTVTYEWAPPVQNQALAR	3	KNVSINTVTYEWAPPVQNQALAR3	58799.7	67014.6	61659.5
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	KNVYGNIEDLVVHMK	KNVYGNIEDLVVHMK	3	KNVYGNIEDLVVHMK3	7479.55	4538.57	9554.35
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	KPAISLADSTDLR	KPAISLADSTDLR	3	KPAISLADSTDLR3	8093.28	14188.5	14671.4
A0A0G2K264	A0A0G2K264	A0A0G2K264_RAT	Dap3	Death associated protein 3	1	KPALELLGYLK	KPALELLGYLK	3	KPALELLGYLK3	4740.31	8569.23	4464.06
Q6AXS5	Q6AXS5	SERB1_RAT	Serbp1	SERPINE1 mRNA-binding protein 1	1	KPANDITSQLEINFGDLGR	KPANDITSQLEINFGDLGR	3	KPANDITSQLEINFGDLGR3	9599.69	7926.24	1872.65
Q6P4Z9	Q6P4Z9	CSN8_RAT	Cops8	COP9 signalosome complex subunit 8	1	KPAPGALDVSLNR	KPAPGALDVSLNR	2	KPAPGALDVSLNR2	5021.69		7060.08
Q6P4Z9	Q6P4Z9	CSN8_RAT	Cops8	COP9 signalosome complex subunit 8	1	KPAPGALDVSLNR	KPAPGALDVSLNR	3	KPAPGALDVSLNR3	215570	248232	204084
O35854	O35854	BCAT2_RAT	Bcat2	Branched-chain-amino-acid aminotransferase, mitochondrial	1	KPAPSQPLLFGK	KPAPSQPLLFGK	2	KPAPSQPLLFGK2	10326.1	7337.76	8092.71
O35854	O35854	BCAT2_RAT	Bcat2	Branched-chain-amino-acid aminotransferase, mitochondrial	1	KPAPSQPLLFGK	KPAPSQPLLFGK	3	KPAPSQPLLFGK3	103312	85277.3	105841
A0A0G2K8I0	A0A0G2K8I0	A0A0G2K8I0_RAT	Sh3bgrl2	SH3 domain-binding glutamic acid-rich-like protein	1	KPAQGNPLPPQIFNGDR	KPAQGNPLPPQIFNGDR	3	KPAQGNPLPPQIFNGDR3	41832.8	30495	40699.7
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	KPAQPLVPSSHLLNEPK	KPAQPLVPSSHLLNEPK	3	KPAQPLVPSSHLLNEPK3	17057.3	18976.3	9147.8
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	KPAQPLVPSSHLLNEPK	KPAQPLVPSSHLLNEPK	4	KPAQPLVPSSHLLNEPK4	87352.2	91695.3	66359.2
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	KPARPNSEVLLSGSEDADDPNK	KPARPNSEVLLSGSEDADDPNK	4	KPARPNSEVLLSGSEDADDPNK4	4770.2	8378.3	6833.47
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	KPASFMTSICDER	KPASFMTSIC(UniMod:4)DER	3	KPASFMTSIC(UniMod:4)DER3	12909.9	21194.2	24876.4
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	KPASGTDKPTPLINK	KPASGTDKPTPLINK	3	KPASGTDKPTPLINK3	23204.9	11794	20201.7
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	KPASGTDKPTPLINK	KPASGTDKPTPLINK	4	KPASGTDKPTPLINK4	12873	9923.88	19578.4
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	KPASPPLPSSQQER	KPASPPLPSSQQER	3	KPASPPLPSSQQER3	7661.54	5993.22	9041.31
A0A8I6ANR6	A0A8I6ANR6	A0A8I6ANR6_RAT	Chuk	IkappaB kinase	1	KPASQCVLDGVR	KPASQC(UniMod:4)VLDGVR	3	KPASQC(UniMod:4)VLDGVR3	7262.49	7220.56	4814.94
F1M7Z1	F1M7Z1	F1M7Z1_RAT	Edc3	Enhancer of mRNA-decapping protein 3	1	KPASSSSAPQSIPK	KPASSSSAPQSIPK	3	KPASSSSAPQSIPK3	8614.88	12149	20620
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	KPASVSPTTPPSPTEGEAS	KPASVSPTTPPSPTEGEAS	2	KPASVSPTTPPSPTEGEAS2	33419.3	26179.9	42078.2
D3ZEI0	P17702;D3ZEI0	D3ZEI0_RAT	AABR07016623.1	60S ribosomal protein L28	0	KPATSYVR	KPATSYVR	2	KPATSYVR2	7689.38	32616.4	20546
B5DEN5	B5DEN5	B5DEN5_RAT	Eef1b2	Elongation factor 1-beta	1	KPAVVAK	KPAVVAK	1	KPAVVAK1			1899.49
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	KPCFDDLQADGTYISPPLACDQVISLK	KPC(UniMod:4)FDDLQADGTYISPPLAC(UniMod:4)DQVISLK	4	KPC(UniMod:4)FDDLQADGTYISPPLAC(UniMod:4)DQVISLK4	5874.96	4854.58	
Q8R4A1	Q8R4A1	ERO1A_RAT	Ero1a	ERO1-like protein alpha	1	KPCPFWNDINQCGR	KPC(UniMod:4)PFWNDINQC(UniMod:4)GR	3	KPC(UniMod:4)PFWNDINQC(UniMod:4)GR3	17205	29836.1	34846.1
F1LQ09	F1LQ09	F1LQ09_RAT	Atl2	Atlastin GTPase 2	1	KPCPVQIVLAHEDDHNFELDEEALER	KPC(UniMod:4)PVQIVLAHEDDHNFELDEEALER	4	KPC(UniMod:4)PVQIVLAHEDDHNFELDEEALER4	14828.5	14082.4	19621.5
A0A1W2Q656	A0A1W2Q656	A0A1W2Q656_RAT	Dner	Delta/notch-like EGF repeat containing	1	KPCQNEASCIDANEK	KPC(UniMod:4)QNEASC(UniMod:4)IDANEK	3	KPC(UniMod:4)QNEASC(UniMod:4)IDANEK3	3292.56	3808.64	3533.43
B4F795	B4F795	CTL2_RAT	Slc44a2	Choline transporter-like protein 2	1	KPDDMPAFPLFSAFGR	KPDDMPAFPLFSAFGR	2	KPDDMPAFPLFSAFGR2	13343.5	3075.8	7957.39
B4F795	B4F795	CTL2_RAT	Slc44a2	Choline transporter-like protein 2	1	KPDDMPAFPLFSAFGR	KPDDMPAFPLFSAFGR	3	KPDDMPAFPLFSAFGR3	264511	259782	309626
Q6AYE5	Q6AYE5	OAF_RAT	Oaf	Out at first protein homolog	1	KPDGTLISFIADFK	KPDGTLISFIADFK	3	KPDGTLISFIADFK3	4111.81	8206.12	9129.9
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	KPDGYDYYAFSK	KPDGYDYYAFSK	2	KPDGYDYYAFSK2	30242.1	19455.8	15289.8
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	KPDGYDYYAFSK	KPDGYDYYAFSK	3	KPDGYDYYAFSK3	347701	315142	294968
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	KPDHVPVSSEDER	KPDHVPVSSEDER	2	KPDHVPVSSEDER2		3696.38	6777.9
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	KPDHVPVSSEDER	KPDHVPVSSEDER	3	KPDHVPVSSEDER3	42659.5	57864.9	49920.5
P02764	P02764	A1AG_RAT	Orm1	Alpha-1-acid glycoprotein	1	KPDLSPELR	KPDLSPELR	2	KPDLSPELR2	5109.4	5233.61	5502.79
P02764	P02764	A1AG_RAT	Orm1	Alpha-1-acid glycoprotein	1	KPDLSPELRK	KPDLSPELRK	3	KPDLSPELRK3	29985.5	33533.9	42835.1
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	KPDPNIK	KPDPNIK	2	KPDPNIK2			15288.3
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	KPDQIFQSYKPGEVMVK	KPDQIFQSYKPGEVMVK	4	KPDQIFQSYKPGEVMVK4	30598.3	31744.9	33858.1
P26453	P26453	BASI_RAT	Bsg	Basigin	1	KPDQTLDEDDPGAAPLK	KPDQTLDEDDPGAAPLK	3	KPDQTLDEDDPGAAPLK3	27904.2	23867.8	24672.2
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	KPDSMVTNSSTENEA	KPDSMVTNSSTENEA	2	KPDSMVTNSSTENEA2	30797.1	30850.5	30559.2
O35763	O35763;P31977;Q5PQK5	MOES_RAT	Msn	Moesin	0	KPDTIEVQQMK	KPDTIEVQQMK	3	KPDTIEVQQMK3	13716.6	12060.2	13522.8
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	KPEDEVLICIQQR	KPEDEVLIC(UniMod:4)IQQR	3	KPEDEVLIC(UniMod:4)IQQR3	61014	60557.1	33747.1
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	KPEDEVLICIQQRPK	KPEDEVLIC(UniMod:4)IQQRPK	3	KPEDEVLIC(UniMod:4)IQQRPK3	27555.7	24564.2	32848.4
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	KPEDEVLICIQQRPK	KPEDEVLIC(UniMod:4)IQQRPK	4	KPEDEVLIC(UniMod:4)IQQRPK4	48057.5	55278.3	70235.5
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	KPEDWDEEMDGEWEPPVIQNPEYK	KPEDWDEEMDGEWEPPVIQNPEYK	4	KPEDWDEEMDGEWEPPVIQNPEYK4	108379	103190	114711
P35565	P35565	CALX_RAT	Canx	Calnexin	1	KPEDWDERPK	KPEDWDERPK	2	KPEDWDERPK2	26398	16303.9	14473.6
P35565	P35565	CALX_RAT	Canx	Calnexin	1	KPEDWDERPK	KPEDWDERPK	3	KPEDWDERPK3	858453	750895	964716
P86172	P86172	NMRL1_RAT	Nmral1	NmrA-like family domain-containing protein 1	1	KPEEYIGQNVGLSTCR	KPEEYIGQNVGLSTC(UniMod:4)R	3	KPEEYIGQNVGLSTC(UniMod:4)R3	6260.03	6128.59	12393.4
Q6AYK6	Q6AYK6	CYBP_RAT	Cacybp	Calcyclin-binding protein	1	KPEFDNEKPAAVVAPLTTGYTVK	KPEFDNEKPAAVVAPLTTGYTVK	3	KPEFDNEKPAAVVAPLTTGYTVK3	26304.9	30847.5	31632.1
Q6AYK6	Q6AYK6	CYBP_RAT	Cacybp	Calcyclin-binding protein	1	KPEFDNEKPAAVVAPLTTGYTVK	KPEFDNEKPAAVVAPLTTGYTVK	4	KPEFDNEKPAAVVAPLTTGYTVK4	71844.3	75556	74934
G3V9N6	G3V9N6	G3V9N6_RAT	LOC100361913	RCG54286-like	1	KPEGAGQVGDPK	KPEGAGQVGDPK	2	KPEGAGQVGDPK2			15749.9
G3V9N6	G3V9N6	G3V9N6_RAT	LOC100361913	RCG54286-like	1	KPEGAGQVGDPK	KPEGAGQVGDPK	3	KPEGAGQVGDPK3			10074.1
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	KPEHELFLVYGK	KPEHELFLVYGK	2	KPEHELFLVYGK2	12873.4	8893.13	3632.97
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	KPEHELFLVYGK	KPEHELFLVYGK	3	KPEHELFLVYGK3	329659	409236	335667
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	KPEIGNGVLSTNK	KPEIGNGVLSTNK	2	KPEIGNGVLSTNK2	775729	822023	889516
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	KPEIGNGVLSTNK	KPEIGNGVLSTNK	3	KPEIGNGVLSTNK3	1.51439e+07	1.76148e+07	1.84929e+07
D4ADM2	D4ADM2	D4ADM2_RAT	Pan3	PAN2-PAN3 deadenylation complex subunit PAN3	1	KPELGVPGAATAGGGLDGPR	KPELGVPGAATAGGGLDGPR	3	KPELGVPGAATAGGGLDGPR3	20139.9	16387.9	13581.3
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	KPELWSDDFTDFVK	KPELWSDDFTDFVK	2	KPELWSDDFTDFVK2	5791.44	238.869	1624.84
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	KPELWSDDFTDFVK	KPELWSDDFTDFVK	3	KPELWSDDFTDFVK3	51080.9	38503.7	62402.6
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	KPELWSDDFTDFVKK	KPELWSDDFTDFVKK	3	KPELWSDDFTDFVKK3	8937.7	10591.7	11331.6
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	KPELWSDDFTDFVKK	KPELWSDDFTDFVKK	4	KPELWSDDFTDFVKK4	15173.4	29151.4	14649.6
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	KPEPCKPILK	KPEPC(UniMod:4)KPILK	3	KPEPC(UniMod:4)KPILK3	46549.4	42438.7	13122.5
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	KPEPDGGEDQPSDSPAESK	KPEPDGGEDQPSDSPAESK	3	KPEPDGGEDQPSDSPAESK3	20330.2	23706.3	15870.9
A0A8I5ZPV1	A0A8I5ZPV1	A0A8I5ZPV1_RAT	Tbc1d22a	TBC1 domain family, member 22a	1	KPEPEPQPIAEPPVAPSGDLR	KPEPEPQPIAEPPVAPSGDLR	3	KPEPEPQPIAEPPVAPSGDLR3	31173.7	20718	19321.6
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	KPEPPVNLK	KPEPPVNLK	2	KPEPPVNLK2	20406.2	12372.8	15049.9
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	KPEPVLATGNR	KPEPVLATGNR	2	KPEPVLATGNR2	6573.89	5986.83	7198.07
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	KPEPVLATGNR	KPEPVLATGNR	3	KPEPVLATGNR3	28049.4	29979.6	30028.5
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	KPEQIVDFLK	KPEQIVDFLK	2	KPEQIVDFLK2	7087.69	4228.58	2331.28
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	KPEQIVDFLK	KPEQIVDFLK	3	KPEQIVDFLK3	28405.8	24763.7	24471.2
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	KPEQIVDFLKK	KPEQIVDFLKK	3	KPEQIVDFLKK3	11962.8	8249.45	12546.4
P09215	P09215	KPCD_RAT	Prkcd	Protein kinase C delta type	1	KPETPETVGIYQGFEK	KPETPETVGIYQGFEK	3	KPETPETVGIYQGFEK3	35936	26755.4	28498.9
A0A8I6A8Q1	A0A8I6A8Q1	A0A8I6A8Q1_RAT	A2ml1	Alpha-2-macroglobulin-like 1	1	KPEVCSSQENQPLLR	KPEVC(UniMod:4)SSQENQPLLR	3	KPEVC(UniMod:4)SSQENQPLLR3	9839.65	7053.28	7916.12
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	KPEVWSDNFMDFVK	KPEVWSDNFMDFVK	2	KPEVWSDNFMDFVK2	12856.4	12154.2	8897.34
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	KPEVWSDNFMDFVK	KPEVWSDNFMDFVK	3	KPEVWSDNFMDFVK3	99825.5	115475	109328
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	KPFAEHWR	KPFAEHWR	2	KPFAEHWR2	7171.1	4985.47	7167.18
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	KPFAMISVTEK	KPFAMISVTEK	3	KPFAMISVTEK3	33788.7	35025	35034.4
D3ZEF9	D3ZEF9	D3ZEF9_RAT	B3gnt2	Hexosyltransferase	1	KPFLLLAIK	KPFLLLAIK	2	KPFLLLAIK2	16832.4	8354.71	7140.29
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	KPFLQQFYSQTVSTASELR	KPFLQQFYSQTVSTASELR	3	KPFLQQFYSQTVSTASELR3	12865.4	6584.89	6298.58
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	KPFMLDEEGDAQTEETQPSETK	KPFMLDEEGDAQTEETQPSETK	3	KPFMLDEEGDAQTEETQPSETK3	7713.92	7586.17	9524.96
G3V7E6	G3V7E6	G3V7E6_RAT	Pcm1	Pericentriolar material 1	1	KPFNFLPMQINTNK	KPFNFLPMQINTNK	3	KPFNFLPMQINTNK3	6794.15	9473.08	7439.53
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	KPFNRPPGVQPK	KPFNRPPGVQPK	3	KPFNRPPGVQPK3	148885	150528	119499
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	KPFPSSR	KPFPSSR	2	KPFPSSR2	656723	493800	292109
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	KPFQANNVSLSNLVK	KPFQANNVSLSNLVK	3	KPFQANNVSLSNLVK3	14906.7	15596.1	15096.8
P21533	A0A0G2KBA1;P21533	RL6_RAT	Rpl6	Large ribosomal subunit protein eL6	0	KPFSQHVR	KPFSQHVR	2	KPFSQHVR2			7600.12
Q9QXU2	Q9QXU2	SURF1_RAT	Surf1	Surfeit locus protein 1	1	KPFVPENNPER	KPFVPENNPER	3	KPFVPENNPER3	39370.9	32334.7	31693.3
A0A8I5ZUT2	A0A8I5ZUT2	A0A8I5ZUT2_RAT	Irgq	Immunity-related GTPase Q	1	KPGIGDSGCSAVR	KPGIGDSGC(UniMod:4)SAVR	3	KPGIGDSGC(UniMod:4)SAVR3	17899.8	13087.6	22890.9
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	KPGLEEAVESACAMR	KPGLEEAVESAC(UniMod:4)AMR	3	KPGLEEAVESAC(UniMod:4)AMR3	28631.7	38268.4	31586.1
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	KPGMFFNPEESELDLTYGNR	KPGMFFNPEESELDLTYGNR	3	KPGMFFNPEESELDLTYGNR3	79636.6	81552.4	64927.3
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	KPGPAPSEETTPTPQPLPAGAPELQK	KPGPAPSEETTPTPQPLPAGAPELQK	3	KPGPAPSEETTPTPQPLPAGAPELQK3	19305.4	11160.3	18302.2
A0A8I5ZXP5	A0A8I5ZXP5	A0A8I5ZXP5_RAT	U2surp	U2 snRNP-associated SURP domain containing	1	KPGQSFQEQVEHYR	KPGQSFQEQVEHYR	4	KPGQSFQEQVEHYR4	4356.65	3329.12	
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	KPGVNVASDWSIHLR	KPGVNVASDWSIHLR	2	KPGVNVASDWSIHLR2	2990.79	1046.1	
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	KPGVNVASDWSIHLR	KPGVNVASDWSIHLR	3	KPGVNVASDWSIHLR3	32943.2	48298.2	39929.8
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	KPGVNVASDWSIHLR	KPGVNVASDWSIHLR	4	KPGVNVASDWSIHLR4	260715	71007.3	277860
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	KPGVSGHGVYELK	KPGVSGHGVYELK	3	KPGVSGHGVYELK3	43888	67316.1	45384.4
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	KPGVSGHGVYELKDESLK	KPGVSGHGVYELKDESLK	4	KPGVSGHGVYELKDESLK4	2581.1	5824.49	10272.3
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	KPGVYTQVTK	KPGVYTQVTK	2	KPGVYTQVTK2	969004	783014	889150
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	KPHAESLELQVR	KPHAESLELQVR	2	KPHAESLELQVR2	13161.3	15400.1	11852
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	KPHAESLELQVR	KPHAESLELQVR	3	KPHAESLELQVR3	292390	295273	339929
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	KPHAGIMSYNAISGLLDVSGSTFVGFK	KPHAGIMSYNAISGLLDVSGSTFVGFK	3	KPHAGIMSYNAISGLLDVSGSTFVGFK3	5349.38		
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	KPHAGIMSYNAISGLLDVSGSTFVGFK	KPHAGIMSYNAISGLLDVSGSTFVGFK	4	KPHAGIMSYNAISGLLDVSGSTFVGFK4	15663.8	7410	8133
D4A7J8	D4A7J8	D4A7J8_RAT	Prpf4	Pre-mRNA processing factor 4	1	KPHIYYGSLEEK	KPHIYYGSLEEK	3	KPHIYYGSLEEK3	18374.3	3111.35	
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	KPHLLSSLDDMSLFR	KPHLLSSLDDMSLFR	3	KPHLLSSLDDMSLFR3	3233.77	7560.06	4626.79
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	KPHLLSSLDDMSLFR	KPHLLSSLDDMSLFR	4	KPHLLSSLDDMSLFR4	1574.51	2500.98	3330.1
A0A0G2K0J0	A0A0G2K0J0	A0A0G2K0J0_RAT	Supt6h	Transcription elongation factor spt6	1	KPHVVTVAGENR	KPHVVTVAGENR	3	KPHVVTVAGENR3	3445.53		
A0A8I5ZLD3	A0A8I5ZLD3	A0A8I5ZLD3_RAT	Abi2	Abl-interactor 2	1	KPIDYTILDDIGHGVK	KPIDYTILDDIGHGVK	3	KPIDYTILDDIGHGVK3	53735.7	45680.2	43195.2
A0A8I5ZLD3	A0A8I5ZLD3	A0A8I5ZLD3_RAT	Abi2	Abl-interactor 2	1	KPIDYTILDDIGHGVK	KPIDYTILDDIGHGVK	4	KPIDYTILDDIGHGVK4	15282.9	22918	13038.6
Q9QZM5	Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	1	KPIDYTVLDDVGHGVK	KPIDYTVLDDVGHGVK	3	KPIDYTVLDDVGHGVK3	209492	190735	207442
Q9QZM5	Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	1	KPIDYTVLDDVGHGVK	KPIDYTVLDDVGHGVK	4	KPIDYTVLDDVGHGVK4	96330.5	103484	102571
P56571	P56571	ES1_RAT		ES1 protein homolog, mitochondrial	1	KPIGLCCIAPVLAAK	KPIGLC(UniMod:4)C(UniMod:4)IAPVLAAK	3	KPIGLC(UniMod:4)C(UniMod:4)IAPVLAAK3	111119	91468.4	127695
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	KPIIYLSAAAR	KPIIYLSAAAR	3	KPIIYLSAAAR3	7982.61	16027.6	5260.39
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	KPIPDEHLILK	KPIPDEHLILK	3	KPIPDEHLILK3	24417.4	26672.1	30275
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	KPIQSGPLK	KPIQSGPLK	2	KPIQSGPLK2	44910.4	33676.8	41152.4
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	KPISADAK	KPISADAK	1	KPISADAK1			5562.08
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	KPISADAK	KPISADAK	2	KPISADAK2			134381
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	KPISLGHPGSLK	KPISLGHPGSLK	3	KPISLGHPGSLK3	12044.8	10036.3	11601.7
D4A7R3	D4A7R3	D4A7R3_RAT	Nup205	Nucleoporin 205	1	KPISTTNLQDPGVLGCPR	KPISTTNLQDPGVLGC(UniMod:4)PR	3	KPISTTNLQDPGVLGC(UniMod:4)PR3	6741.68	7805.87	4707.64
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	KPITDDDVDR	KPITDDDVDR	2	KPITDDDVDR2	67253	59182.2	52932.4
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	KPITDDDVDR	KPITDDDVDR	3	KPITDDDVDR3	109296	150826	145204
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	KPITDDDVDRISLCLK	KPITDDDVDRISLC(UniMod:4)LK	4	KPITDDDVDRISLC(UniMod:4)LK4	7945.24	11613.6	10161
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	KPIYWIVAGK	KPIYWIVAGK	2	KPIYWIVAGK2	7326.65	4643.43	6352.3
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	KPIYWIVAGK	KPIYWIVAGK	3	KPIYWIVAGK3	5618.55	10510.8	3762.23
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	KPLDFETEPVTSIVFK	KPLDFETEPVTSIVFK	2	KPLDFETEPVTSIVFK2	13650.4	8550.76	8074.86
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	KPLDFETEPVTSIVFK	KPLDFETEPVTSIVFK	3	KPLDFETEPVTSIVFK3	648700	526297	507837
P48199	P48199	CRP_RAT	Crp	C-reactive protein	1	KPLEAFTVCLYAHADVSR	KPLEAFTVC(UniMod:4)LYAHADVSR	3	KPLEAFTVC(UniMod:4)LYAHADVSR3	2.57851e+06	1.74754e+06	1.57806e+06
P48199	P48199	CRP_RAT	Crp	C-reactive protein	1	KPLEAFTVCLYAHADVSR	KPLEAFTVC(UniMod:4)LYAHADVSR	4	KPLEAFTVC(UniMod:4)LYAHADVSR4	1.28422e+06	821436	4.53355e+06
P48199	P48199	CRP_RAT	Crp	C-reactive protein	1	KPLEAFTVCLYAHADVSRSFSIFSYATK	KPLEAFTVC(UniMod:4)LYAHADVSRSFSIFSYATK	4	KPLEAFTVC(UniMod:4)LYAHADVSRSFSIFSYATK4	47134.6	28355.7	30629.5
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	KPLFFGEGTVLR	KPLFFGEGTVLR	2	KPLFFGEGTVLR2	26737.2		24142
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	KPLFFGEGTVLR	KPLFFGEGTVLR	3	KPLFFGEGTVLR3	116148	96401.6	117726
P39951	P39951	CDK1_RAT	Cdk1	Cyclin-dependent kinase 1	1	KPLFHGDSEIDQLFR	KPLFHGDSEIDQLFR	3	KPLFHGDSEIDQLFR3	31089.6	11999.1	
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	KPLGSGSAAPQRPIATQR	KPLGSGSAAPQRPIATQR	3	KPLGSGSAAPQRPIATQR3	251719	206158	185848
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	KPLGSGSAAPQRPIATQR	KPLGSGSAAPQRPIATQR	4	KPLGSGSAAPQRPIATQR4	2.74947e+06	3.00048e+06	3.1228e+06
P62775	P62775	MTPN_RAT	Mtpn	Myotrophin	1	KPLHYAADCGQLEILEFLLLK	KPLHYAADC(UniMod:4)GQLEILEFLLLK	3	KPLHYAADC(UniMod:4)GQLEILEFLLLK3	5819.78	5513.34	4549.55
P62775	P62775	MTPN_RAT	Mtpn	Myotrophin	1	KPLHYAADCGQLEILEFLLLK	KPLHYAADC(UniMod:4)GQLEILEFLLLK	4	KPLHYAADC(UniMod:4)GQLEILEFLLLK4	15328.8	26637	10624.8
Q5XI78	Q5XI78;D3ZQD3	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	0	KPLIVFTPK	KPLIVFTPK	2	KPLIVFTPK2	48785.7	37103.6	40794.7
Q5U300	Q5U300;A0A8I5ZVX0;A0A8I6A544	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	0	KPLLESGTLGTK	KPLLESGTLGTK	2	KPLLESGTLGTK2	28968.7	1122.74	11350.6
Q5U300	Q5U300;A0A8I5ZVX0;A0A8I6A544	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	0	KPLLESGTLGTK	KPLLESGTLGTK	3	KPLLESGTLGTK3	28553.8	62318.3	44756.3
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	KPLPVSHWAQVTLVK	KPLPVSHWAQVTLVK	4	KPLPVSHWAQVTLVK4	9092.85	16674.1	19143.6
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	KPLSTPGFHNSEEAISSSGSK	KPLSTPGFHNSEEAISSSGSK	4	KPLSTPGFHNSEEAISSSGSK4	20848.5	44886.5	35970.9
Q68G38	Q68G38	TOR1A_RAT	Tor1a	Torsin-1A	1	KPLTLSLHGWTGTGK	KPLTLSLHGWTGTGK	3	KPLTLSLHGWTGTGK3	13569.4	14793	15947
Q68G38	Q68G38	TOR1A_RAT	Tor1a	Torsin-1A	1	KPLTLSLHGWTGTGK	KPLTLSLHGWTGTGK	4	KPLTLSLHGWTGTGK4	9001.24	14147.7	15174.6
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	KPLVIIAEDVDGEALSTLVLNR	KPLVIIAEDVDGEALSTLVLNR	3	KPLVIIAEDVDGEALSTLVLNR3	280688	295522	247723
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	KPLVIIAEDVDGEALSTLVLNR	KPLVIIAEDVDGEALSTLVLNR	4	KPLVIIAEDVDGEALSTLVLNR4		4667.07	2342.58
P43138	P43138	APEX1_RAT	Apex1	DNA-(apurinic or apyrimidinic site) endonuclease	1	KPLVLCGDLNVAHEEIDLR	KPLVLC(UniMod:4)GDLNVAHEEIDLR	4	KPLVLC(UniMod:4)GDLNVAHEEIDLR4	9610.67	2595.69	
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	KPLYHYK	KPLYHYK	1	KPLYHYK1	2525.9	3272.74	2578.93
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	KPLYHYK	KPLYHYK	2	KPLYHYK2	86566.1	60793.8	58849.7
Q4QQV2	Q4QQV2	DOK1_RAT	Dok1	Docking protein 1	1	KPLYWDLYGHVQQQLLK	KPLYWDLYGHVQQQLLK	4	KPLYWDLYGHVQQQLLK4	4800.96	5389.36	8189.61
P32198	P32198	CPT1A_RAT	Cpt1a	Carnitine O-palmitoyltransferase 1, liver isoform	1	KPMLYSFQTSLPR	KPMLYSFQTSLPR	3	KPMLYSFQTSLPR3	19636.7	17995.8	26477.9
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	KPMSLASGSVPAAPHK	KPMSLASGSVPAAPHK	3	KPMSLASGSVPAAPHK3	7951.45		4087.47
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	KPMSLASGSVPAAPHK	KPMSLASGSVPAAPHK	4	KPMSLASGSVPAAPHK4	6479.16	8556.08	5968.66
A0A8I5ZV77	A0A8I6A554;A0A8I5ZV77	A0A8I5ZV77_RAT	Mrps36	Mitochondrial ribosomal protein S36	0	KPMSQEEMEFIQR	KPMSQEEMEFIQR	3	KPMSQEEMEFIQR3	16327.4	20800.2	24566
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	KPMTNYQIPQTALLK	KPMTNYQIPQTALLK	3	KPMTNYQIPQTALLK3	36780.7	33358.6	15016.7
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	KPMVVLGSSALQR	KPMVVLGSSALQR	2	KPMVVLGSSALQR2	3528.18	2512.69	2563.32
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	KPMVVLGSSALQR	KPMVVLGSSALQR	3	KPMVVLGSSALQR3	49719.7	52579.3	74071.6
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	KPNAPSAATAGPDVPFNSTGSFK	KPNAPSAATAGPDVPFNSTGSFK	3	KPNAPSAATAGPDVPFNSTGSFK3	25067.3	22348.6	33603
P97694	P97694	CYH1_RAT	Cyth1	Cytohesin-1	1	KPNCFELYIPDNK	KPNC(UniMod:4)FELYIPDNK	3	KPNC(UniMod:4)FELYIPDNK3	8087.9	10580.8	7370.16
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	KPNQPYEWISYK	KPNQPYEWISYK	3	KPNQPYEWISYK3	10699.7	12449.9	13119.2
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	KPNTLKK	KPNTLKK	2	KPNTLKK2			17342
M0RDU0	M0RDU0	HAP40_RAT	F8a1	40-kDa huntingtin-associated protein	1	KPNVAEAGEQFAQLAR	KPNVAEAGEQFAQLAR	2	KPNVAEAGEQFAQLAR2	1900.29	3813.48	1709.45
M0RDU0	M0RDU0	HAP40_RAT	F8a1	40-kDa huntingtin-associated protein	1	KPNVAEAGEQFAQLAR	KPNVAEAGEQFAQLAR	3	KPNVAEAGEQFAQLAR3	50551.6	53486.2	62546.9
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	KPPAPDPFAR	KPPAPDPFAR	2	KPPAPDPFAR2	27630.5	32024.8	19260.7
D3ZYT6	D3ZYT6	D3ZYT6_RAT	Treml1	Triggering receptor expressed on myeloid cells-like 1	1	KPPAPPPEPPLPPK	KPPAPPPEPPLPPK	2	KPPAPPPEPPLPPK2	79154.6	49104.1	50588.5
D3ZYT6	D3ZYT6	D3ZYT6_RAT	Treml1	Triggering receptor expressed on myeloid cells-like 1	1	KPPAPPPEPPLPPK	KPPAPPPEPPLPPK	3	KPPAPPPEPPLPPK3	1.5401e+06	1.054e+06	883294
A0A8I6APP3	A0A8I6APP3	A0A8I6APP3_RAT	Plekho2	Pleckstrin homology domain containing O2	1	KPPAPPPK	KPPAPPPK	2	KPPAPPPK2			34520.7
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	KPPDAGGCVHGDGDMGVLCPTGCELR	KPPDAGGC(UniMod:4)VHGDGDMGVLC(UniMod:4)PTGC(UniMod:4)ELR	3	KPPDAGGC(UniMod:4)VHGDGDMGVLC(UniMod:4)PTGC(UniMod:4)ELR3	6.1461e+06	5.02774e+06	5.31291e+06
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	KPPDAGGCVHGDGDMGVLCPTGCELR	KPPDAGGC(UniMod:4)VHGDGDMGVLC(UniMod:4)PTGC(UniMod:4)ELR	4	KPPDAGGC(UniMod:4)VHGDGDMGVLC(UniMod:4)PTGC(UniMod:4)ELR4	5.56246e+07	5.34415e+07	5.82249e+07
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	KPPEESTCFER	KPPEESTC(UniMod:4)FER	3	KPPEESTC(UniMod:4)FER3	19233.5	18270.6	18416.8
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	KPPEESTCFERPCFK	KPPEESTC(UniMod:4)FERPC(UniMod:4)FK	3	KPPEESTC(UniMod:4)FERPC(UniMod:4)FK3	138399	145149	108847
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	KPPEESTCFERPCFK	KPPEESTC(UniMod:4)FERPC(UniMod:4)FK	4	KPPEESTC(UniMod:4)FERPC(UniMod:4)FK4	256726	235579	218394
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	KPPKPQLMANYYNK	KPPKPQLMANYYNK	2	KPPKPQLMANYYNK2	3889.96	3178.98	
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	KPPKPQLMANYYNK	KPPKPQLMANYYNK	3	KPPKPQLMANYYNK3	91967.9	101544	74548.4
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	KPPKPQLMANYYNK	KPPKPQLMANYYNK	4	KPPKPQLMANYYNK4	13538.4	12336.7	15492.2
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	KPPLFNMNAMSALYHIAQNDSPTLQSR	KPPLFNMNAMSALYHIAQNDSPTLQSR	4	KPPLFNMNAMSALYHIAQNDSPTLQSR4	16215.2	32559	27643.7
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	KPPMMSIDDAYEVLNLPVGQGLHDESK	KPPMMSIDDAYEVLNLPVGQGLHDESK	4	KPPMMSIDDAYEVLNLPVGQGLHDESK4	18769.9	21898.7	25688.3
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	KPPPATGTATVMQTGGSATLSK	KPPPATGTATVMQTGGSATLSK	3	KPPPATGTATVMQTGGSATLSK3	5741.34	3215.78	3350.81
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	KPPPNLFK	KPPPNLFK	2	KPPPNLFK2	648751	649152	531153
P0C5W1	P0C5W1	MAP1S_RAT	Map1s	Microtubule-associated protein 1S	1	KPPPPASPGSSDSSAR	KPPPPASPGSSDSSAR	3	KPPPPASPGSSDSSAR3			8188.44
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	KPPPPQGSRPESTVSFNPYEPTGGAWGPDR	KPPPPQGSRPESTVSFNPYEPTGGAWGPDR	4	KPPPPQGSRPESTVSFNPYEPTGGAWGPDR4	136343	202889	172825
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	KPPPPVPK	KPPPPVPK	2	KPPPPVPK2	31378.4		25537.2
O35254	O35254	GORS1_RAT	Gorasp1	Golgi reassembly-stacking protein 1	1	KPPSASSPGTPAK	KPPSASSPGTPAK	2	KPPSASSPGTPAK2			6657.79
O35254	O35254	GORS1_RAT	Gorasp1	Golgi reassembly-stacking protein 1	1	KPPSASSPGTPAK	KPPSASSPGTPAK	3	KPPSASSPGTPAK3			24547.5
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	KPPSISAQFQTSLNK	KPPSISAQFQTSLNK	3	KPPSISAQFQTSLNK3	17000.2	13784.5	16510.6
B2RYW9	B2RYW9	FAHD2_RAT	Fahd2	Fumarylacetoacetate hydrolase domain-containing protein 2	1	KPPVFLK	KPPVFLK	2	KPPVFLK2	25577.7	14002	14620.8
D4AB17	D4AB17	D4AB17_RAT	Pfas	phosphoribosylformylglycinamidine synthase	1	KPPVLQPLALPPDLSVGQALER	KPPVLQPLALPPDLSVGQALER	3	KPPVLQPLALPPDLSVGQALER3	10621.3	17139.4	15595.1
D3ZBW5	D3ZBW5	D3ZBW5_RAT	LOC685203	Small membrane A-kinase anchor protein	1	KPPVPGAVIGSVILEFADR	KPPVPGAVIGSVILEFADR	3	KPPVPGAVIGSVILEFADR3	6866.08	8683.74	7553.32
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	KPPVSVEPSLDIVSK	KPPVSVEPSLDIVSK	2	KPPVSVEPSLDIVSK2	9514.67		4879.13
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	KPPVSVEPSLDIVSK	KPPVSVEPSLDIVSK	3	KPPVSVEPSLDIVSK3	84108	96247.3	87382.1
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	KPQDFLEELK	KPQDFLEELK	2	KPQDFLEELK2	44149.8	40465.1	45074.1
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	KPQDFLEELK	KPQDFLEELK	3	KPQDFLEELK3	171212	147238	157413
D3ZEF9	D3ZEF9	D3ZEF9_RAT	B3gnt2	Hexosyltransferase	1	KPQEMIDIWSQLQSPNLK	KPQEMIDIWSQLQSPNLK	3	KPQEMIDIWSQLQSPNLK3	36039.2	37521.1	36485.5
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	KPQVAYK	KPQVAYK	2	KPQVAYK2			61390
Q04400	F1LQT1;Q04400	ADCY5_RAT	Adcy5	Adenylate cyclase type 5	0	KPQYDIWGNTVNVASR	KPQYDIWGNTVNVASR	3	KPQYDIWGNTVNVASR3	17068.3	16746.2	26108.5
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	KPQYDIWGNTVNVSSR	KPQYDIWGNTVNVSSR	3	KPQYDIWGNTVNVSSR3	131144	124571	123369
P18292	P18292	THRB_RAT	F2	Prothrombin	1	KPRETFMDCLEGR	KPRETFMDC(UniMod:4)LEGR	3	KPRETFMDC(UniMod:4)LEGR3	15907.6	27264.6	23249.5
P18292	P18292	THRB_RAT	F2	Prothrombin	1	KPRETFMDCLEGR	KPRETFMDC(UniMod:4)LEGR	4	KPRETFMDC(UniMod:4)LEGR4	34119.2	54459.5	66052.9
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	KPRPLDPGEGSK	KPRPLDPGEGSK	3	KPRPLDPGEGSK3			30354.9
A0A8I6A502	A0A8I6A502	A0A8I6A502_RAT	Tns3	Tensin 3	1	KPSAPTPTQAYGQSNYSTQTWVR	KPSAPTPTQAYGQSNYSTQTWVR	3	KPSAPTPTQAYGQSNYSTQTWVR3	6646.29	5422.49	3335.94
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	KPSASLPSPSGSR	KPSASLPSPSGSR	2	KPSASLPSPSGSR2	10823	5933.13	7782.4
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	KPSASLPSPSGSR	KPSASLPSPSGSR	3	KPSASLPSPSGSR3	123316	135082	
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	KPSASLPSPSGSRK	KPSASLPSPSGSRK	3	KPSASLPSPSGSRK3	11388	13455.3	3305.4
O55043	O55043	ARHG7_RAT	Arhgef7	Rho guanine nucleotide exchange factor 7	1	KPSDEEFAVR	KPSDEEFAVR	3	KPSDEEFAVR3	37086.2	29288.3	46159.8
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	KPSDKPSAPLGR	KPSDKPSAPLGR	2	KPSDKPSAPLGR2	18035.6	17186	
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	KPSDKPSAPLGR	KPSDKPSAPLGR	3	KPSDKPSAPLGR3	3094.27	1.07544e+06	
P26051	P26051	CD44_RAT	Cd44	CD44 antigen	1	KPSELNGEASK	KPSELNGEASK	2	KPSELNGEASK2	23409.3		8649.71
P26051	P26051	CD44_RAT	Cd44	CD44 antigen	1	KPSELNGEASK	KPSELNGEASK	3	KPSELNGEASK3			107403
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	KPSLEGVEETEGSGGQAAQEAPAR	KPSLEGVEETEGSGGQAAQEAPAR	3	KPSLEGVEETEGSGGQAAQEAPAR3	7195.12	16363.7	8913.23
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	KPSLEGVEETEGSGGQAAQEAPARK	KPSLEGVEETEGSGGQAAQEAPARK	4	KPSLEGVEETEGSGGQAAQEAPARK4	8225.62	16073.9	14522.1
D4A416	D4A416	D4A416_RAT	Clptm1l	CLPTM1-like	1	KPSNALDEPVSHWRPR	KPSNALDEPVSHWRPR	4	KPSNALDEPVSHWRPR4	26662.1	16453.1	21269.8
A0A8I6A1Z5	A0A8I6A1Z5	A0A8I6A1Z5_RAT	Tmx1	Thioredoxin-related transmembrane protein 1	1	KPSPEFSQPLK	KPSPEFSQPLK	2	KPSPEFSQPLK2	6448.78	2617	4330.14
A0A8I6A1Z5	A0A8I6A1Z5	A0A8I6A1Z5_RAT	Tmx1	Thioredoxin-related transmembrane protein 1	1	KPSPEFSQPLK	KPSPEFSQPLK	3	KPSPEFSQPLK3	159909	138645	144750
A0A8I6A1Z5	A0A8I6A1Z5	A0A8I6A1Z5_RAT	Tmx1	Thioredoxin-related transmembrane protein 1	1	KPSPEFSQPLKK	KPSPEFSQPLKK	3	KPSPEFSQPLKK3	157805	135481	85209.7
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	KPSPEILMSLEELEK	KPSPEILMSLEELEK	3	KPSPEILMSLEELEK3	48437.4	43304.7	34476.8
P25977	P25977	UBF1_RAT	Ubtf	Nucleolar transcription factor 1	1	KPSQEGGK	KPSQEGGK	1	KPSQEGGK1		1016.96	
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	KPSSPSLSPLMGFGSK	KPSSPSLSPLMGFGSK	3	KPSSPSLSPLMGFGSK3	2813.32	11725.4	6624.3
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	KPSTLLSCSR	KPSTLLSC(UniMod:4)SR	3	KPSTLLSC(UniMod:4)SR3	39949.3	25384.4	34734.6
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	KPSVDNSASAPDYK	KPSVDNSASAPDYK	2	KPSVDNSASAPDYK2	2252.32	1467.66	
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	KPSVDNSASAPDYK	KPSVDNSASAPDYK	3	KPSVDNSASAPDYK3	43987.1	48335.6	42576.7
A0A8I6AVW0	A0A8I6AVW0	A0A8I6AVW0_RAT	ENSRNOG00000065875	Uncharacterized protein	1	KPSVPEPEADGFVLLGDTANEVR	KPSVPEPEADGFVLLGDTANEVR	3	KPSVPEPEADGFVLLGDTANEVR3	16598.8	17299.4	22796.2
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	KPSWLTPVPESHK	KPSWLTPVPESHK	3	KPSWLTPVPESHK3	25192.7	32865	27028.6
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	KPTAALPTK	KPTAALPTK	2	KPTAALPTK2	8198.41	11043	8546.15
Q66HD3	Q66HD3	NASP_RAT	Nasp	Nuclear autoantigenic sperm protein	1	KPTDGASSSNCVTDISHLVR	KPTDGASSSNC(UniMod:4)VTDISHLVR	3	KPTDGASSSNC(UniMod:4)VTDISHLVR3	8009.86		
Q66HD3	Q66HD3	NASP_RAT	Nasp	Nuclear autoantigenic sperm protein	1	KPTDGASSSNCVTDISHLVR	KPTDGASSSNC(UniMod:4)VTDISHLVR	4	KPTDGASSSNC(UniMod:4)VTDISHLVR4	7459.23	2027.85	3585.63
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	KPTEDPANDTVDFPK	KPTEDPANDTVDFPK	3	KPTEDPANDTVDFPK3	132000	124986	86040
P52303	P52303	AP1B1_RAT	Ap1b1	AP-1 complex subunit beta-1	1	KPTETQELVQQVLSLATQDSDNPDLRDR	KPTETQELVQQVLSLATQDSDNPDLRDR	4	KPTETQELVQQVLSLATQDSDNPDLRDR4	6464.13	10081.4	5819.08
Q0D2L2	Q0D2L2	Q0D2L2_RAT	Mrps22	Mitochondrial ribosomal protein S22	1	KPTFMDEEVQSILTK	KPTFMDEEVQSILTK	3	KPTFMDEEVQSILTK3	8802.63	9964.79	6291.65
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	KPTGLFYLLDEESNFPHATSHTLLAK	KPTGLFYLLDEESNFPHATSHTLLAK	4	KPTGLFYLLDEESNFPHATSHTLLAK4	34638.5	37880.7	33129.4
Q6P7R8	Q6P7R8	DHB12_RAT	Hsd17b12	Very-long-chain 3-oxoacyl-CoA reductase	1	KPTLDKPSAETFVK	KPTLDKPSAETFVK	3	KPTLDKPSAETFVK3	67793.4	94261.3	75110.6
Q6P7R8	Q6P7R8	DHB12_RAT	Hsd17b12	Very-long-chain 3-oxoacyl-CoA reductase	1	KPTLDKPSAETFVK	KPTLDKPSAETFVK	4	KPTLDKPSAETFVK4	17584.8	10449.1	9775.13
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	KPTLILR	KPTLILR	2	KPTLILR2	53239.5	55419.5	51015.4
P09215	P09215	KPCD_RAT	Prkcd	Protein kinase C delta type	1	KPTMYPEWK	KPTMYPEWK	3	KPTMYPEWK3	24896.2	26225.7	20431.5
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	KPTMYPPWDSTFDAHINK	KPTMYPPWDSTFDAHINK	3	KPTMYPPWDSTFDAHINK3	28602.4	18487.5	10320.6
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	KPTMYPPWDSTFDAHINK	KPTMYPPWDSTFDAHINK	4	KPTMYPPWDSTFDAHINK4	58726.9	57119.1	62913.4
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	KPTSTEASCPLSK	KPTSTEASC(UniMod:4)PLSK	3	KPTSTEASC(UniMod:4)PLSK3	9452.13	16149.2	6715.46
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	KPTTVPLPQGK	KPTTVPLPQGK	3	KPTTVPLPQGK3	16377.5	7554.77	12678.5
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	KPTVDLVINQLK	KPTVDLVINQLK	3	KPTVDLVINQLK3	4745.79	12221.5	7432.42
P70619	P70619	GSHR_RAT	Gsr	Glutathione reductase (Fragment)	1	KPTVTTIPDVDCLLWAIGR	KPTVTTIPDVDC(UniMod:4)LLWAIGR	3	KPTVTTIPDVDC(UniMod:4)LLWAIGR3	55473.8	58104.8	23260
P70619	P70619	GSHR_RAT	Gsr	Glutathione reductase (Fragment)	1	KPTVTTIPDVDCLLWAIGRDPNSK	KPTVTTIPDVDC(UniMod:4)LLWAIGRDPNSK	4	KPTVTTIPDVDC(UniMod:4)LLWAIGRDPNSK4	11396.1	13588.4	11184.3
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	KPTYCNFCHIMLMGVR	KPTYC(UniMod:4)NFC(UniMod:4)HIMLMGVR	3	KPTYC(UniMod:4)NFC(UniMod:4)HIMLMGVR3	6001.93	6900.25	3721.49
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	KPTYCNFCHIMLMGVR	KPTYC(UniMod:4)NFC(UniMod:4)HIMLMGVR	4	KPTYC(UniMod:4)NFC(UniMod:4)HIMLMGVR4	11846.8	9971.88	
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	KPVDQYEDCYLAR	KPVDQYEDC(UniMod:4)YLAR	2	KPVDQYEDC(UniMod:4)YLAR2	139726	164608	161290
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	KPVDQYEDCYLAR	KPVDQYEDC(UniMod:4)YLAR	3	KPVDQYEDC(UniMod:4)YLAR3	1.99256e+06	2.32727e+06	2.32969e+06
B2RZ72	B2RZ72	B2RZ72_RAT	Arpc4	Actin-related protein 2/3 complex subunit 4	1	KPVEGYDISFLITNFHTEQMYK	KPVEGYDISFLITNFHTEQMYK	3	KPVEGYDISFLITNFHTEQMYK3	67041.5	46897.4	41917.2
B2RZ72	B2RZ72	B2RZ72_RAT	Arpc4	Actin-related protein 2/3 complex subunit 4	1	KPVEGYDISFLITNFHTEQMYK	KPVEGYDISFLITNFHTEQMYK	4	KPVEGYDISFLITNFHTEQMYK4	50844.9	55114	33098
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	KPVIPVVSSTVLPSTYQIR	KPVIPVVSSTVLPSTYQIR	3	KPVIPVVSSTVLPSTYQIR3	21714.7	42259.9	36381.8
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	KPVLFSFQPNHFFNNNK	KPVLFSFQPNHFFNNNK	3	KPVLFSFQPNHFFNNNK3	12629.5	5521.21	13407
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	KPVLFSFQPNHFFNNNK	KPVLFSFQPNHFFNNNK	4	KPVLFSFQPNHFFNNNK4	21440.7	21113.7	18396.3
D3ZSC2	D3ZSC2	D3ZSC2_RAT	Pdcd2l	Programmed cell death 2-like	1	KPVLLGFR	KPVLLGFR	2	KPVLLGFR2	15561.9	22581	10846.3
P18292	P18292	THRB_RAT	F2	Prothrombin	1	KPVPFSDYIHPVCLPDK	KPVPFSDYIHPVC(UniMod:4)LPDK	3	KPVPFSDYIHPVC(UniMod:4)LPDK3	463375	504705	430970
P18292	P18292	THRB_RAT	F2	Prothrombin	1	KPVPFSDYIHPVCLPDK	KPVPFSDYIHPVC(UniMod:4)LPDK	4	KPVPFSDYIHPVC(UniMod:4)LPDK4	27237.3	34151	24082.1
P18292	P18292	THRB_RAT	F2	Prothrombin	1	KPVPFSDYIHPVCLPDKQTVTSLLQAGYK	KPVPFSDYIHPVC(UniMod:4)LPDKQTVTSLLQAGYK	4	KPVPFSDYIHPVC(UniMod:4)LPDKQTVTSLLQAGYK4	3.15865e+06	3.82621e+06	3.86573e+06
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	KPVTDCVISVPSFFTDAER	KPVTDC(UniMod:4)VISVPSFFTDAER	3	KPVTDC(UniMod:4)VISVPSFFTDAER3	91782.1	105804	105984
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	KPVTDCVISVPSFFTDAERR	KPVTDC(UniMod:4)VISVPSFFTDAERR	4	KPVTDC(UniMod:4)VISVPSFFTDAERR4	29408.4	16159.2	40476.2
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	KPVTEAQNCHLDR	KPVTEAQNC(UniMod:4)HLDR	2	KPVTEAQNC(UniMod:4)HLDR2	3219.82		3836.82
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	KPVTEAQNCHLDR	KPVTEAQNC(UniMod:4)HLDR	3	KPVTEAQNC(UniMod:4)HLDR3	74875	65188.1	81620
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	KPVTEAQNCHLDR	KPVTEAQNC(UniMod:4)HLDR	4	KPVTEAQNC(UniMod:4)HLDR4	21299.8	22821.1	25835.2
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	KPVTEFATCHLAQAPNHVVVSR	KPVTEFATC(UniMod:4)HLAQAPNHVVVSR	3	KPVTEFATC(UniMod:4)HLAQAPNHVVVSR3	78715.3	47534.8	47058.5
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	KPVTEFATCHLAQAPNHVVVSR	KPVTEFATC(UniMod:4)HLAQAPNHVVVSR	4	KPVTEFATC(UniMod:4)HLAQAPNHVVVSR4	1.24465e+06	1.15568e+06	1.1872e+06
Q5U2R3	Q5U2R3	FRMD8_RAT	Frmd8	FERM domain-containing protein 8	1	KPVTVAISLEGVHVIDNR	KPVTVAISLEGVHVIDNR	4	KPVTVAISLEGVHVIDNR4	7213.97	7278.71	15297.4
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	KPVVCTCSTVEVQAVLSALLTR	KPVVC(UniMod:4)TC(UniMod:4)STVEVQAVLSALLTR	3	KPVVC(UniMod:4)TC(UniMod:4)STVEVQAVLSALLTR3	10685.1	9054.26	5018.88
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	KPVVDCVVSVPSFYTDAER	KPVVDC(UniMod:4)VVSVPSFYTDAER	3	KPVVDC(UniMod:4)VVSVPSFYTDAER3	851814	793808	687218
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	KPVVDCVVSVPSFYTDAER	KPVVDC(UniMod:4)VVSVPSFYTDAER	4	KPVVDC(UniMod:4)VVSVPSFYTDAER4	15422.2	14394.6	
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	KPVVDCVVSVPSFYTDAERR	KPVVDC(UniMod:4)VVSVPSFYTDAERR	3	KPVVDC(UniMod:4)VVSVPSFYTDAERR3	42790	49847.5	42148.5
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	KPVVDCVVSVPSFYTDAERR	KPVVDC(UniMod:4)VVSVPSFYTDAERR	4	KPVVDC(UniMod:4)VVSVPSFYTDAERR4	396807	526230	491266
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	KPWLSYPYYNPPQK	KPWLSYPYYNPPQK	2	KPWLSYPYYNPPQK2	10257.3	16245.3	8032.64
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	KPWLSYPYYNPPQK	KPWLSYPYYNPPQK	3	KPWLSYPYYNPPQK3	65516.4	92938.7	81102.6
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	KPWNVAFLAYETK	KPWNVAFLAYETK	2	KPWNVAFLAYETK2	238956	157881	152477
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	KPWNVAFLAYETK	KPWNVAFLAYETK	3	KPWNVAFLAYETK3	3.4936e+06	2.85206e+06	2.92371e+06
Q2TGI9	Q2TGI9	Q2TGI9_RAT	Zdhhc21	Palmitoyltransferase	1	KPWQQTFSEVFGTR	KPWQQTFSEVFGTR	3	KPWQQTFSEVFGTR3	29636.4	17696.3	23004.2
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	KPWTAVDTSVHGK	KPWTAVDTSVHGK	3	KPWTAVDTSVHGK3	36574.6	26032.7	24032.6
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	KPWYLEECSSTLATTYSSGESYDK	KPWYLEEC(UniMod:4)SSTLATTYSSGESYDK	3	KPWYLEEC(UniMod:4)SSTLATTYSSGESYDK3	13336.7	13610.3	12424.9
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	KPWYLEECSSTLATTYSSGESYDKK	KPWYLEEC(UniMod:4)SSTLATTYSSGESYDKK	4	KPWYLEEC(UniMod:4)SSTLATTYSSGESYDKK4	9162.46	13461	13363.7
Q99MZ8	Q99MZ8	LASP1_RAT	Lasp1	LIM and SH3 domain protein 1	1	KPYCNAHYPK	KPYC(UniMod:4)NAHYPK	2	KPYC(UniMod:4)NAHYPK2			10383.1
Q99MZ8	Q99MZ8	LASP1_RAT	Lasp1	LIM and SH3 domain protein 1	1	KPYCNAHYPK	KPYC(UniMod:4)NAHYPK	3	KPYC(UniMod:4)NAHYPK3			27757.3
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	KPYIWEYSR	KPYIWEYSR	3	KPYIWEYSR3	57431.7	49901.2	54069.9
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	KPYNFLK	KPYNFLK	2	KPYNFLK2	129726	76759.3	117546
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	KPYNPIIGETFHCSWR	KPYNPIIGETFHC(UniMod:4)SWR	3	KPYNPIIGETFHC(UniMod:4)SWR3	7285.94	3770.49	
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	KPYNPIIGETFHCSWR	KPYNPIIGETFHC(UniMod:4)SWR	4	KPYNPIIGETFHC(UniMod:4)SWR4	7176.22	11977.1	10742.5
A0A0G2JXN8	A0A0G2JXN8;A0A8I5ZU98	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	0	KPYNPILGETFR	KPYNPILGETFR	2	KPYNPILGETFR2		2095.1	2695.76
A0A0G2JXN8	A0A0G2JXN8;A0A8I5ZU98	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	0	KPYNPILGETFR	KPYNPILGETFR	3	KPYNPILGETFR3	58351.9	99322.5	73938.4
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	KPYNVESYTPQTQGK	KPYNVESYTPQTQGK	2	KPYNVESYTPQTQGK2	10159.9	7551.18	7157.92
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	KPYNVESYTPQTQGK	KPYNVESYTPQTQGK	3	KPYNVESYTPQTQGK3	399945	450959	404479
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	KPYPDDENLVEVK	KPYPDDENLVEVK	3	KPYPDDENLVEVK3	8771.8	17340.4	11321.8
A0A1W2Q642	A0A1W2Q642	A0A1W2Q642_RAT	Pi16	Peptidase inhibitor 16	1	KPYQEGTPCSQCPLGYSCVNSLCEPER	KPYQEGTPC(UniMod:4)SQC(UniMod:4)PLGYSC(UniMod:4)VNSLC(UniMod:4)EPER	4	KPYQEGTPC(UniMod:4)SQC(UniMod:4)PLGYSC(UniMod:4)VNSLC(UniMod:4)EPER4	270084	224727	235704
A0A1W2Q642	A0A1W2Q642	A0A1W2Q642_RAT	Pi16	Peptidase inhibitor 16	1	KPYQEGTPCSQCPLGYSCVNSLCEPERK	KPYQEGTPC(UniMod:4)SQC(UniMod:4)PLGYSC(UniMod:4)VNSLC(UniMod:4)EPERK	4	KPYQEGTPC(UniMod:4)SQC(UniMod:4)PLGYSC(UniMod:4)VNSLC(UniMod:4)EPERK4	4253.44	2353.07	3196.36
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	KPYSMDPDHR	KPYSMDPDHR	3	KPYSMDPDHR3		9821.66	
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	KQAEETYENIPGR	KQAEETYENIPGR	3	KQAEETYENIPGR3	22991.6	16002.2	17112.4
Q6PEC1	F1M825;Q6PEC1	TBCA_RAT	Tbca	Tubulin-specific chaperone A	0	KQAEILQESR	KQAEILQESR	2	KQAEILQESR2	1672.14	1963.84	6087.54
Q6PEC1	F1M825;Q6PEC1	TBCA_RAT	Tbca	Tubulin-specific chaperone A	0	KQAEILQESR	KQAEILQESR	3	KQAEILQESR3	23737.5	26464.4	22452.8
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	KQAGPASVPLR	KQAGPASVPLR	2	KQAGPASVPLR2	3241.65	2270.07	
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	KQAGPASVPLRTEDEFK	KQAGPASVPLRTEDEFK	4	KQAGPASVPLRTEDEFK4	23443.3	29299.1	
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	KQALESILASDR	KQALESILASDR	3	KQALESILASDR3	11464.4	18167.5	9991.15
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	KQALQDTLALYK	KQALQDTLALYK	3	KQALQDTLALYK3	3818.87	4242.66	9001.1
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	KQANDLVSTLMK	KQANDLVSTLMK	3	KQANDLVSTLMK3	27680.3	39928.2	28707.6
Q4FZT0	Q4FZT0	STML2_RAT	Stoml2	Stomatin-like protein 2, mitochondrial	1	KQAQILASEAEK	KQAQILASEAEK	3	KQAQILASEAEK3	4155.51		
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	KQAQVKDNENVINEYSSILEDQK	KQAQVKDNENVINEYSSILEDQK	4	KQAQVKDNENVINEYSSILEDQK4	4591.08	2345.54	13559.7
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	KQAVIGNLDEEQYK	KQAVIGNLDEEQYK	2	KQAVIGNLDEEQYK2	2019.82	3799.92	831.895
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	KQAVIGNLDEEQYK	KQAVIGNLDEEQYK	3	KQAVIGNLDEEQYK3	26734.7	38409.6	19092.6
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	KQAVLLK	KQAVLLK	2	KQAVLLK2	25332.5	16161.5	21784.8
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	KQCETPLDPQNGIVHVNTDIR	KQC(UniMod:4)ETPLDPQNGIVHVNTDIR	4	KQC(UniMod:4)ETPLDPQNGIVHVNTDIR4	32928.1	38521.3	33388
Q561S0	A0A1W2Q6F8;Q561S0	NDUAA_RAT	Ndufa10	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial	0	KQCVDHYNEIK	KQC(UniMod:4)VDHYNEIK	3	KQC(UniMod:4)VDHYNEIK3		3288.64	
P05369	P05369	FPPS_RAT	Fdps	Farnesyl pyrophosphate synthase	1	KQDAESLQR	KQDAESLQR	2	KQDAESLQR2			47344.6
A0A8I6AGG9	A0A8I6AGG9	A0A8I6AGG9_RAT	Chchd3	Coiled-coil-helix-coiled-coil-helix domain containing 3	1	KQDAFYK	KQDAFYK	2	KQDAFYK2		5363.39	
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	KQDFVDEMAK	KQDFVDEMAK	2	KQDFVDEMAK2	13438.7	16014.6	5808.07
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	KQDFVDEMAK	KQDFVDEMAK	3	KQDFVDEMAK3	14061.6	29894.2	31315
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	KQDLQDERDSLAAQLEITLTK	KQDLQDERDSLAAQLEITLTK	4	KQDLQDERDSLAAQLEITLTK4	6017.82	13687.4	9726.88
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	KQDPEVPFWR	KQDPEVPFWR	3	KQDPEVPFWR3	11933.9	7665.77	9077.05
D3ZUU5	D3ZUU5	D3ZUU5_RAT	Dnajb1	DnaJ heat shock protein family (Hsp40) member B1	1	KQDPPVTHDLR	KQDPPVTHDLR	3	KQDPPVTHDLR3	12236.3	4822.24	
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	KQDTVETPVGFAWVPLLK	KQDTVETPVGFAWVPLLK	3	KQDTVETPVGFAWVPLLK3	3582.72	2117.95	1176
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	KQDVIYELIQTELHHVR	KQDVIYELIQTELHHVR	4	KQDVIYELIQTELHHVR4	27618.8	50538.2	27672.1
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	KQDWSDHAIWWEQK	KQDWSDHAIWWEQK	3	KQDWSDHAIWWEQK3	24845.3	14372.9	20440.6
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	KQDWSDHAIWWEQK	KQDWSDHAIWWEQK	4	KQDWSDHAIWWEQK4	21965.7	16926.7	27543.8
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	KQDWSDHAIWWEQKK	KQDWSDHAIWWEQKK	4	KQDWSDHAIWWEQKK4	16760.1	9285.88	
P08081	P08081	CLCA_RAT	Clta	Clathrin light chain A	1	KQEAEWK	KQEAEWK	2	KQEAEWK2	15804.4	5254.72	
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	KQEALVAR	KQEALVAR	2	KQEALVAR2		111010	
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	KQEDFMTTMDANEEK	KQEDFMTTMDANEEK	2	KQEDFMTTMDANEEK2	12862.9	10455.2	6772.29
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	KQEDFMTTMDANEEK	KQEDFMTTMDANEEK	3	KQEDFMTTMDANEEK3	60725	84186.9	95388.1
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	KQEEFDIANNGSSQANK	KQEEFDIANNGSSQANK	3	KQEEFDIANNGSSQANK3	7731.5	12065.4	8626.92
A0A8I5ZP83	D4A9Z8;A0A8I5ZP83	A0A8I5ZP83_RAT	Chmp4b	Charged multivesicular body protein 4B	0	KQEFLEK	KQEFLEK	2	KQEFLEK2	35526.4	42020.8	39943.4
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	KQEGEPNCWSSNNSGISLAAR	KQEGEPNC(UniMod:4)WSSNNSGISLAAR	3	KQEGEPNC(UniMod:4)WSSNNSGISLAAR3	19273.1	21874.1	31740.2
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	KQEGTPEGLYL	KQEGTPEGLYL	2	KQEGTPEGLYL2	73044.6	80117.7	83815
F1M625	F1M625	UBP46_RAT	Usp46	Ubiquitin carboxyl-terminal hydrolase 46	1	KQEKQNGK	KQEKQNGK	2	KQEKQNGK2			9829.25
B4F7E7	B4F7E7	PALS1_RAT	Pals1	Protein PALS1	1	KQELDLNSSMR	KQELDLNSSMR	3	KQELDLNSSMR3	8065.33	4182.8	15273.8
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KQELEEICHDLEAR	KQELEEIC(UniMod:4)HDLEAR	2	KQELEEIC(UniMod:4)HDLEAR2	27043.5	34675	21225.1
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KQELEEICHDLEAR	KQELEEIC(UniMod:4)HDLEAR	3	KQELEEIC(UniMod:4)HDLEAR3	1.299e+06	1.50612e+06	1.43156e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KQELEEICHDLEAR	KQELEEIC(UniMod:4)HDLEAR	4	KQELEEIC(UniMod:4)HDLEAR4	779917	1.02354e+06	993516
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	KQEQANNPFYIK	KQEQANNPFYIK	3	KQEQANNPFYIK3	4908.42	10009.8	15254.7
Q7TPA5	Q7TPA5	SPA11_RAT	Serpina11	Serpin A11	1	KQESFFVDQR	KQESFFVDQR	3	KQESFFVDQR3	3433.4	8704.59	
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	KQETTASFVTESLDR	KQETTASFVTESLDR	3	KQETTASFVTESLDR3	8542.17	6465.21	8881.88
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	KQETTASFVTESLDRR	KQETTASFVTESLDRR	4	KQETTASFVTESLDRR4	10585	13267.7	9186.47
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	KQEVQAWDGEVR	KQEVQAWDGEVR	2	KQEVQAWDGEVR2	7219.47	6440.43	7143.75
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	KQEVQAWDGEVR	KQEVQAWDGEVR	3	KQEVQAWDGEVR3	18213.1	27815.4	29833.3
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	KQEYLEVQR	KQEYLEVQR	2	KQEYLEVQR2	3727.25	5416.73	
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	KQFEHDTLNK	KQFEHDTLNK	3	KQFEHDTLNK3	5472.36		7342.41
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	KQFGAQANVIGPWIQTK	KQFGAQANVIGPWIQTK	2	KQFGAQANVIGPWIQTK2	11815.9	12007.1	6671.48
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	KQFGAQANVIGPWIQTK	KQFGAQANVIGPWIQTK	3	KQFGAQANVIGPWIQTK3	140007	181733	186353
Q63716	Q63716;A0A0G2K3Z9	PRDX1_RAT	Prdx1	Peroxiredoxin-1	0	KQGGLGPMNIPLVSDPK	KQGGLGPMNIPLVSDPK	3	KQGGLGPMNIPLVSDPK3	37327	29212.7	27460.3
Q63716	Q63716;A0A0G2K3Z9	PRDX1_RAT	Prdx1	Peroxiredoxin-1	0	KQGGLGPMNIPLVSDPKR	KQGGLGPMNIPLVSDPKR	4	KQGGLGPMNIPLVSDPKR4	19493.3	18182.7	28827
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	KQGLLPLTFADPSDYNK	KQGLLPLTFADPSDYNK	3	KQGLLPLTFADPSDYNK3	6395.22	6406.86	10943
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	KQGVSPADMYR	KQGVSPADMYR	3	KQGVSPADMYR3	37554.8	51424.9	58673.4
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	KQGWITVGDLEGCIHYK	KQGWITVGDLEGC(UniMod:4)IHYK	3	KQGWITVGDLEGC(UniMod:4)IHYK3	3236.74	785.229	
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	KQGWITVGDLEGCIHYK	KQGWITVGDLEGC(UniMod:4)IHYK	4	KQGWITVGDLEGC(UniMod:4)IHYK4		3271.7	2913.4
D3ZR64	D3ZR64	D3ZR64_RAT	Zfp598	RING-type E3 ubiquitin transferase	1	KQHELFCCK	KQHELFC(UniMod:4)C(UniMod:4)K	3	KQHELFC(UniMod:4)C(UniMod:4)K3	2035.88	2962.21	2539.87
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	KQHLYVK	KQHLYVK	2	KQHLYVK2	6629.84		26868.3
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	KQIAVEAQEILR	KQIAVEAQEILR	3	KQIAVEAQEILR3	5563.35	3015.38	6687.75
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	KQILESMQSDR	KQILESMQSDR	3	KQILESMQSDR3	10152.7	11071.6	12642
P55213	P55213	CASP3_RAT	Casp3	Caspase-3	1	KQIPCIVSMLTK	KQIPC(UniMod:4)IVSMLTK	3	KQIPC(UniMod:4)IVSMLTK3	10596.3	16555.7	10322.7
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	KQIQESENIR	KQIQESENIR	3	KQIQESENIR3	12096.3	36999.1	
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	KQISGQYSGSPQLLK	KQISGQYSGSPQLLK	3	KQISGQYSGSPQLLK3	8644.77	5837.39	
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	KQIYSVDQTR	KQIYSVDQTR	2	KQIYSVDQTR2	3598.91	1791.61	3751.79
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	KQIYSVDQTR	KQIYSVDQTR	3	KQIYSVDQTR3	26794.8	19972.7	28579.1
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	KQIYSVDQTRR	KQIYSVDQTRR	3	KQIYSVDQTRR3	10738.3	16646.9	6568.67
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	KQLAAGSIADCLAK	KQLAAGSIADC(UniMod:4)LAK	2	KQLAAGSIADC(UniMod:4)LAK2	7672.23	6299.97	1291.91
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	KQLAAGSIADCLAK	KQLAAGSIADC(UniMod:4)LAK	3	KQLAAGSIADC(UniMod:4)LAK3	192130	176581	160639
D4ACC1	D4ACC1	D4ACC1_RAT	Dapp1	Dual adaptor of phosphotyrosine and 3-phosphoinositides 1	1	KQLDQDDTIR	KQLDQDDTIR	3	KQLDQDDTIR3	5276.48	7872.73	5839.45
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	KQLELSK	KQLELSK	2	KQLELSK2	4575.33	5265.22	7347.42
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	KQLLHLAEEK	KQLLHLAEEK	3	KQLLHLAEEK3		5515.75	1871.11
F7ELS2	F7ELS2	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	1	KQLLHSCTVIATNILLVDEIMR	KQLLHSC(UniMod:4)TVIATNILLVDEIMR	4	KQLLHSC(UniMod:4)TVIATNILLVDEIMR4	9257.28		4992.69
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	KQLMQDKDHLSQK	KQLMQDKDHLSQK	2	KQLMQDKDHLSQK2	4169.74		5385.56
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	KQLMQDKDHLSQK	KQLMQDKDHLSQK	3	KQLMQDKDHLSQK3	3378.75		9961.49
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	KQLMQDKDHLSQK	KQLMQDKDHLSQK	4	KQLMQDKDHLSQK4	2485.89		
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	KQLPDIHLLAQR	KQLPDIHLLAQR	2	KQLPDIHLLAQR2		5612.1	
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	KQLPDIHLLAQR	KQLPDIHLLAQR	3	KQLPDIHLLAQR3	187113	209624	211133
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	KQLQDEMLR	KQLQDEMLR	2	KQLQDEMLR2	11984.7	9085.78	9616.89
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	KQLQDEMLR	KQLQDEMLR	3	KQLQDEMLR3	20302.2	12999.6	18888.8
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	KQLQQLSGWLTLTEER	KQLQQLSGWLTLTEER	3	KQLQQLSGWLTLTEER3	9923.41	1476.09	6025.79
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	KQLSTVMR	KQLSTVMR	2	KQLSTVMR2	19902.8	13248.8	10653.4
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	KQLTALR	KQLTALR	2	KQLTALR2	12860	17029.5	16380.3
A0A8J8YNE4	A0A8J8YNE4	A0A8J8YNE4_RAT	Apool	MICOS complex subunit	1	KQLVRPEQLPIYTAPPLHSK	KQLVRPEQLPIYTAPPLHSK	4	KQLVRPEQLPIYTAPPLHSK4	35111.3	38015	37906.5
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	KQMEALQGELK	KQMEALQGELK	3	KQMEALQGELK3	15129.3	10992.9	4448.48
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	KQNAPMTLEEFRK	KQNAPMTLEEFRK	4	KQNAPMTLEEFRK4	2692.82	5347.43	5370.35
P50398	P50398	GDIA_RAT	Gdi1	Rab GDP dissociation inhibitor alpha	1	KQNDVFGEADQ	KQNDVFGEADQ	2	KQNDVFGEADQ2	10117	8481.04	7201.39
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	KQNHTSSISIAR	KQNHTSSISIAR	3	KQNHTSSISIAR3	17436.5	2864.72	5503.13
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	KQNLILSDEAIK	KQNLILSDEAIK	3	KQNLILSDEAIK3	15294.7	11464.3	11908.4
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	KQNLLHSEK	KQNLLHSEK	2	KQNLLHSEK2			13284
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	KQNLLHSEKR	KQNLLHSEKR	3	KQNLLHSEKR3			6078.51
A0A0G2K1G4	A0A0G2K1G4	A0A0G2K1G4_RAT	Rspry1	Ring finger and SPRY domain containing 1	1	KQNVDGLVLDTLAVIR	KQNVDGLVLDTLAVIR	3	KQNVDGLVLDTLAVIR3	7781.76	3088.06	15129.8
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	KQNVQFMHNR	KQNVQFMHNR	3	KQNVQFMHNR3	20938.9	24771.8	18449.2
P58751	P58751	RELN_RAT	Reln	Reelin	1	KQNYMMNFSR	KQNYMMNFSR	2	KQNYMMNFSR2	2534.57	3194.9	
P58751	P58751	RELN_RAT	Reln	Reelin	1	KQNYMMNFSR	KQNYMMNFSR	3	KQNYMMNFSR3	15939	16350.3	17834
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	KQPALDVLYDVMK	KQPALDVLYDVMK	2	KQPALDVLYDVMK2	33176.6	27437.2	30842.8
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	KQPALDVLYDVMK	KQPALDVLYDVMK	3	KQPALDVLYDVMK3	153172	178739	186899
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	KQPDEEPMDMVVEK	KQPDEEPMDMVVEK	3	KQPDEEPMDMVVEK3	62669.6	79313.7	74307.4
A0A8I6AE91	A0A8I6AE91	A0A8I6AE91_RAT	Gga2	Golgi associated, gamma adaptin ear containing, ARF binding protein 2	1	KQPGAITLMGGGIQSLSADR	KQPGAITLMGGGIQSLSADR	3	KQPGAITLMGGGIQSLSADR3	6580.05	17573.1	12718.1
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	KQPLDLIR	KQPLDLIR	2	KQPLDLIR2	157128	157665	143049
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	KQPNPGGELCYK	KQPNPGGELC(UniMod:4)YK	3	KQPNPGGELC(UniMod:4)YK3	10490.8	15258.9	7494.44
B5DEI0	B5DEI0	B5DEI0_RAT	Pcyox1l	Pcyox1l protein	1	KQPQEAAVWR	KQPQEAAVWR	3	KQPQEAAVWR3	43488.9	38679	37029.8
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	KQPSHMEAAHFGDLGR	KQPSHMEAAHFGDLGR	4	KQPSHMEAAHFGDLGR4	11741.8	7795.45	11937.8
Q5QJC9	Q5QJC9	BAG5_RAT	Bag5	BAG family molecular chaperone regulator 5	1	KQPSLPLSEDVHPSVAK	KQPSLPLSEDVHPSVAK	4	KQPSLPLSEDVHPSVAK4	7783.05	9554.13	20456.5
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	KQPSNNLDR	KQPSNNLDR	2	KQPSNNLDR2			78150.1
A0A8I6AAR9	A0A8I6AAR9	A0A8I6AAR9_RAT	Ankrd17	Ankyrin repeat domain 17	1	KQPSVLVTFPK	KQPSVLVTFPK	3	KQPSVLVTFPK3			3659.42
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	KQQADSNCGFAEEYEDLK	KQQADSNC(UniMod:4)GFAEEYEDLK	3	KQQADSNC(UniMod:4)GFAEEYEDLK3	37460.8	42508.5	42949.3
A0A8I6AAD8	A0A8I6AAD8	A0A8I6AAD8_RAT	Snx4	Sorting nexin 4	1	KQQCEELATGTVR	KQQC(UniMod:4)EELATGTVR	3	KQQC(UniMod:4)EELATGTVR3	13551	11199	15332.4
M0RCS2	M0RCS2	M0RCS2_RAT	Tbl2	Transducin (beta)-like 2	1	KQQDPYLLR	KQQDPYLLR	3	KQQDPYLLR3	8870.98	7878.62	14206.2
A0A8I6GHH3	A0A8I6GHH3	A0A8I6GHH3_RAT	Sh3bgrl	SH3 domain binding glutamate-rich protein like	1	KQQDVLCFLEANK	KQQDVLC(UniMod:4)FLEANK	3	KQQDVLC(UniMod:4)FLEANK3	7341.5	14127.1	9991.62
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	KQQISLATQMVR	KQQISLATQMVR	2	KQQISLATQMVR2	11498.6	11242.8	8903.98
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	KQQISLATQMVR	KQQISLATQMVR	3	KQQISLATQMVR3	31247	42370.4	44114.9
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	KQQLAEEEAR	KQQLAEEEAR	2	KQQLAEEEAR2	7864.6		4377.73
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	KQQLTNQLADAK	KQQLTNQLADAK	2	KQQLTNQLADAK2	1295.97	962.698	
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	KQQLTNQLADAK	KQQLTNQLADAK	3	KQQLTNQLADAK3	6918.02	8570.62	6061.98
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	KQQMLENQMEVR	KQQMLENQMEVR	2	KQQMLENQMEVR2	18686.7	14592	17084.1
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	KQQMLENQMEVR	KQQMLENQMEVR	3	KQQMLENQMEVR3	21447	29384.1	32619.7
F7EUU4	F7EUU4	F7EUU4_RAT	Cops5	COP9 signalosome subunit 5	1	KQQQEILAAKPWTK	KQQQEILAAKPWTK	3	KQQQEILAAKPWTK3	4503.35	5803.34	7683.35
F7EUU4	F7EUU4	F7EUU4_RAT	Cops5	COP9 signalosome subunit 5	1	KQQQEILAAKPWTK	KQQQEILAAKPWTK	4	KQQQEILAAKPWTK4	5476.42	7183.69	7620.85
A0A8I6A263	A0A8I6A263	A0A8I6A263_RAT	Aimp1	Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	1	KQQSAAASADSKPVDVSR	KQQSAAASADSKPVDVSR	4	KQQSAAASADSKPVDVSR4		14151	
A0A8I6G6W8	A0A8I5Y276;A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	KQQSEISAAVER	KQQSEISAAVER	3	KQQSEISAAVER3	5554.08	4923.65	7131.68
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	KQQTIILDDELIQWK	KQQTIILDDELIQWK	3	KQQTIILDDELIQWK3	5931.2	2688.83	5768.81
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	KQSDDILTVLK	KQSDDILTVLK	3	KQSDDILTVLK3	15549.4	11734.1	20395.9
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	KQSEPQEITLPSPDR	KQSEPQEITLPSPDR	2	KQSEPQEITLPSPDR2	10177.1	14506	13066.3
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	KQSEPQEITLPSPDR	KQSEPQEITLPSPDR	3	KQSEPQEITLPSPDR3	445177	487799	515749
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	KQSLLEAVASK	KQSLLEAVASK	3	KQSLLEAVASK3	13373.2	7227.54	15635.8
P35565	P35565	CALX_RAT	Canx	Calnexin	1	KQSNAMEYK	KQSNAMEYK	2	KQSNAMEYK2	11716.5		17459.1
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	KQSYHGYTQMMECLQGYK	KQSYHGYTQMMEC(UniMod:4)LQGYK	3	KQSYHGYTQMMEC(UniMod:4)LQGYK3	4341.52	1574.78	4310.07
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	KQSYHGYTQMMECLQGYK	KQSYHGYTQMMEC(UniMod:4)LQGYK	4	KQSYHGYTQMMEC(UniMod:4)LQGYK4	29143.6	45186	35111
P02770	P02770	ALBU_RAT	Alb	Albumin	1	KQTALAELVK	KQTALAELVK	2	KQTALAELVK2	4.4579e+06	4.65415e+06	3.99154e+06
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	KQTCGQPQPCER	KQTC(UniMod:4)GQPQPC(UniMod:4)ER	3	KQTC(UniMod:4)GQPQPC(UniMod:4)ER3			6661.95
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	KQTDIPNK	KQTDIPNK	2	KQTDIPNK2			57958.3
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	KQTEYGPQDR	KQTEYGPQDR	2	KQTEYGPQDR2	4816.22		2166.16
P68255	P68255	1433T_RAT	Ywhaq	14-3-3 protein theta	1	KQTIENSQGAYQEAFDISK	KQTIENSQGAYQEAFDISK	3	KQTIENSQGAYQEAFDISK3	11420.1	15709.6	12152.9
P68255	P68255	1433T_RAT	Ywhaq	14-3-3 protein theta	1	KQTIENSQGAYQEAFDISKK	KQTIENSQGAYQEAFDISKK	4	KQTIENSQGAYQEAFDISKK4			7817.74
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	KQTLEDTLNLYR	KQTLEDTLNLYR	3	KQTLEDTLNLYR3	49648	43216.9	18910.4
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	KQTNYLR	KQTNYLR	2	KQTNYLR2	18599	27860.3	24155.3
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	KQTPPASPSPQPAEDRPPSSPIYEDAAPLK	KQTPPASPSPQPAEDRPPSSPIYEDAAPLK	4	KQTPPASPSPQPAEDRPPSSPIYEDAAPLK4	765628	771686	802147
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	KQVAEVNHLEQQLEEANSVR	KQVAEVNHLEQQLEEANSVR	4	KQVAEVNHLEQQLEEANSVR4	3653.13		7656.96
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	KQVATIEK	KQVATIEK	1	KQVATIEK1	1260.61		
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	KQVATIEK	KQVATIEK	2	KQVATIEK2	16531.2		9251.37
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	KQVDGLIQETK	KQVDGLIQETK	3	KQVDGLIQETK3	13359.1	14265.2	9236.39
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	KQVEILNQYPHFK	KQVEILNQYPHFK	3	KQVEILNQYPHFK3	7558.09	13207.4	9145.3
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	KQVEILNQYPHFK	KQVEILNQYPHFK	4	KQVEILNQYPHFK4	6470.91	10812.7	4805.01
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	KQVFELLAALCIYSPEGHALTLDALDHYK	KQVFELLAALC(UniMod:4)IYSPEGHALTLDALDHYK	4	KQVFELLAALC(UniMod:4)IYSPEGHALTLDALDHYK4	16571.7	17029	11937.3
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	KQVIVNLVDQAGR	KQVIVNLVDQAGR	2	KQVIVNLVDQAGR2	3787.07	1426.42	
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	KQVIVNLVDQAGR	KQVIVNLVDQAGR	3	KQVIVNLVDQAGR3	15763.6	25090.4	27447.8
P40241	P40241	CD9_RAT	Cd9	CD9 antigen	1	KQVLESFQVK	KQVLESFQVK	2	KQVLESFQVK2	885408	937895	1.00613e+06
P40241	P40241	CD9_RAT	Cd9	CD9 antigen	1	KQVLESFQVK	KQVLESFQVK	3	KQVLESFQVK3	3.04079e+06	3.5559e+06	3.98577e+06
P01026	P01026	CO3_RAT	C3	Complement C3	1	KQVLTSEK	KQVLTSEK	1	KQVLTSEK1			861.564
P01026	P01026	CO3_RAT	C3	Complement C3	1	KQVLTSEK	KQVLTSEK	2	KQVLTSEK2	208942		44016.6
O35397	O35397	CASP6_RAT	Casp6	Caspase-6	1	KQVPCFASMLTK	KQVPC(UniMod:4)FASMLTK	3	KQVPC(UniMod:4)FASMLTK3	3655.64	2368.36	
P25236	P25236	SEPP1_RAT	Selenop	Selenoprotein P	1	KQVSDHIAVYR	KQVSDHIAVYR	2	KQVSDHIAVYR2	2801.59	4855.69	3893.53
P25236	P25236	SEPP1_RAT	Selenop	Selenoprotein P	1	KQVSDHIAVYR	KQVSDHIAVYR	3	KQVSDHIAVYR3	376843	367686	297822
P15684	P15684	AMPN_RAT	Anpep	Aminopeptidase N	1	KQVTPLFAYFK	KQVTPLFAYFK	3	KQVTPLFAYFK3	4662.47	13096.5	7609.97
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	KQVVMSADAK	KQVVMSADAK	2	KQVVMSADAK2		4234.16	
P29314	P29314	RS9_RAT	Rps9	Small ribosomal subunit protein uS4	1	KQVVNIPSFIVR	KQVVNIPSFIVR	3	KQVVNIPSFIVR3	18498.7	26535.7	10380.8
Q63396	Q63396	TCP4_RAT	Sub1	Activated RNA polymerase II transcriptional coactivator p15	1	KQVVPEKPVK	KQVVPEKPVK	3	KQVVPEKPVK3	6864.5	4656.41	7708.47
Q5XIP1	Q5XIP1	PELO_RAT	Pelo	Protein pelota homolog	1	KQWDSVVLER	KQWDSVVLER	2	KQWDSVVLER2	8774.01	6897.98	9187.92
Q5XIP1	Q5XIP1	PELO_RAT	Pelo	Protein pelota homolog	1	KQWDSVVLER	KQWDSVVLER	3	KQWDSVVLER3	73057.8	77763.5	57207.4
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	KQWIPLLCWYR	KQWIPLLC(UniMod:4)WYR	3	KQWIPLLC(UniMod:4)WYR3	5193.9	5588.24	
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	KQWLLQTHWTLDK	KQWLLQTHWTLDK	4	KQWLLQTHWTLDK4	5456.32	8349.9	1439.33
D3ZTX0	D3ZTX0	TMED7_RAT	Tmed7	Transmembrane emp24 domain-containing protein 7	1	KQYDSFTFTASK	KQYDSFTFTASK	2	KQYDSFTFTASK2	60406.5	17189.3	55143.9
D3ZTX0	D3ZTX0	TMED7_RAT	Tmed7	Transmembrane emp24 domain-containing protein 7	1	KQYDSFTFTASK	KQYDSFTFTASK	3	KQYDSFTFTASK3	53970.2	53321.2	61799.3
Q6AY25	Q6AY25	TMED3_RAT	Tmed3	Transmembrane emp24 domain-containing protein 3	1	KQYDSFTYK	KQYDSFTYK	2	KQYDSFTYK2		2960.99	1681.79
Q6AY25	Q6AY25	TMED3_RAT	Tmed3	Transmembrane emp24 domain-containing protein 3	1	KQYDSFTYK	KQYDSFTYK	3	KQYDSFTYK3	6231.81	4414.83	2630.64
Q6TUG0	Q6TUG0	DJB11_RAT	Dnajb11	DnaJ homolog subfamily B member 11	1	KQYDTYGEEGLK	KQYDTYGEEGLK	3	KQYDTYGEEGLK3	6856	9809.44	12663.7
P0CE43	P0CE43	GRB10_RAT	Grb10	Growth factor receptor-bound protein 10	1	KQYNAPNEHGMCIKPNK	KQYNAPNEHGMC(UniMod:4)IKPNK	4	KQYNAPNEHGMC(UniMod:4)IKPNK4	4379.61	7405.54	9260.12
Q99N37	Q99N37	RHG17_RAT	Arhgap17	Rho GTPase-activating protein 17	1	KRPASMAVMEGDLVK	KRPASMAVMEGDLVK	3	KRPASMAVMEGDLVK3	7060.88	6492.33	8097.83
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	KRPCGHPGDTPFGSFR	KRPC(UniMod:4)GHPGDTPFGSFR	3	KRPC(UniMod:4)GHPGDTPFGSFR3	36977.6	28819.8	30497.1
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	KRPCGHPGDTPFGSFR	KRPC(UniMod:4)GHPGDTPFGSFR	4	KRPC(UniMod:4)GHPGDTPFGSFR4	245240	274253	267184
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	KRPETVATQFK	KRPETVATQFK	3	KRPETVATQFK3	324280	274362	364962
P14270	P14270	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	1	KRPMSQISGVK	KRPMSQISGVK	3	KRPMSQISGVK3	17558.4	26851.5	23938.9
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	KRPPLQEYVR	KRPPLQEYVR	3	KRPPLQEYVR3	14690.2	13639.7	11470.5
A0A8I5ZZG2	A0A8I5ZZG2	A0A8I5ZZG2_RAT	Reep3	Receptor expression-enhancing protein	1	KRPQVYF	KRPQVYF	2	KRPQVYF2	5968.81	8342.87	
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	KSADDFIDK	KSADDFIDK	2	KSADDFIDK2	9660.2	13847.4	13372.4
A0A8I6ASS6	A0A8I6ASS6	A0A8I6ASS6_RAT	AC098459.1	L-lactate dehydrogenase	1	KSADTIWGIQK	KSADTIWGIQK	3	KSADTIWGIQK3	64076		92978.1
P04642	P04642;A0A8I6AAU7	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	KSADTLWGIQK	KSADTLWGIQK	2	KSADTLWGIQK2	9252.49	15475	10366.9
P04642	P04642;A0A8I6AAU7	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	KSADTLWGIQK	KSADTLWGIQK	3	KSADTLWGIQK3		37925.3	58056.7
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	KSDEENLFEIITADEVHYYMQAATAK	KSDEENLFEIITADEVHYYMQAATAK	4	KSDEENLFEIITADEVHYYMQAATAK4		3767.69	2661.37
P38983	A0A8I5ZZE2;P38983	RSSA_RAT	Rpsa	Small ribosomal subunit protein uS2	0	KSDGIYIINLK	KSDGIYIINLK	3	KSDGIYIINLK3	5874.37	3382.18	3474.29
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	KSDIDEIVLVGGSTR	KSDIDEIVLVGGSTR	2	KSDIDEIVLVGGSTR2	15220.9		6395.92
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	KSDIDEIVLVGGSTR	KSDIDEIVLVGGSTR	3	KSDIDEIVLVGGSTR3	100383	109619	103461
B2GV55	B2GV55	B2GV55_RAT	Ube2q1	Ubiquitin conjugating enzyme E2 Q1	1	KSEDDGIGKENLAILEK	KSEDDGIGKENLAILEK	4	KSEDDGIGKENLAILEK4	4162.02	9924.33	3816.62
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	KSEDPSAGPDAGLPTGSQGDSK	KSEDPSAGPDAGLPTGSQGDSK	3	KSEDPSAGPDAGLPTGSQGDSK3	78193.5	78521.3	72947.1
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	KSEDSHVFSAVHSTR	KSEDSHVFSAVHSTR	3	KSEDSHVFSAVHSTR3	1325.63		
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	KSEDSHVFSAVHSTR	KSEDSHVFSAVHSTR	4	KSEDSHVFSAVHSTR4	7565.62	9269.49	5519.07
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	KSEEEIDFLR	KSEEEIDFLR	3	KSEEEIDFLR3	15121.4	21180.3	11124.4
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	KSEESQEIQK	KSEESQEIQK	2	KSEESQEIQK2			9157.33
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	KSEIGIAMGSGTAVAK	KSEIGIAMGSGTAVAK	3	KSEIGIAMGSGTAVAK3	37276.9	39944.4	47775.3
D4A1A5	D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	KSELPQDPHTEK	KSELPQDPHTEK	3	KSELPQDPHTEK3	9132.37	8273.44	
Q07266	Q07266	DREB_RAT	Dbn1	Drebrin	1	KSESEVEEAAAIIAQRPDNPR	KSESEVEEAAAIIAQRPDNPR	4	KSESEVEEAAAIIAQRPDNPR4	7215.72	1779.81	3374.08
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	KSFDLISHNR	KSFDLISHNR	3	KSFDLISHNR3	3397.68	6650.33	2672.63
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	KSGLPDLILGK	KSGLPDLILGK	2	KSGLPDLILGK2	1433.71	1520.43	
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	KSGLPDLILGK	KSGLPDLILGK	3	KSGLPDLILGK3	3436.2	7311.07	14137.7
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	KSGQKPVLSDVHAELDR	KSGQKPVLSDVHAELDR	4	KSGQKPVLSDVHAELDR4	4433.07	4586.91	4766.13
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	KSLEDQVETLR	KSLEDQVETLR	2	KSLEDQVETLR2	6582.49	6690.74	6850.29
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	KSLEDQVETLR	KSLEDQVETLR	3	KSLEDQVETLR3	162074	145279	147885
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	KSLLNSLEEAK	KSLLNSLEEAK	3	KSLLNSLEEAK3	34185.2	47463.4	25772.9
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	KSLTPTLPMESTLNK	KSLTPTLPMESTLNK	3	KSLTPTLPMESTLNK3	10656.2	11092.5	6402.54
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	KSMWITK	KSMWITK	2	KSMWITK2	5824.26	6267.52	7320.15
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	KSNAHYNLQNAFNLAEQHLGLTK	KSNAHYNLQNAFNLAEQHLGLTK	3	KSNAHYNLQNAFNLAEQHLGLTK3	4047.96		
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	KSNAHYNLQNAFNLAEQHLGLTK	KSNAHYNLQNAFNLAEQHLGLTK	4	KSNAHYNLQNAFNLAEQHLGLTK4	5555	5679.65	9778.43
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	KSNTLPTSVTVEISDSAPSAPLVK	KSNTLPTSVTVEISDSAPSAPLVK	3	KSNTLPTSVTVEISDSAPSAPLVK3	11519.8	12847.9	9094.06
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	KSPAENGGNTAEVLNVK	KSPAENGGNTAEVLNVK	3	KSPAENGGNTAEVLNVK3	14597.7	11981	16543.2
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	KSPDSDVAVTLK	KSPDSDVAVTLK	2	KSPDSDVAVTLK2	6817.26	8561.71	9678.13
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	KSPDSDVAVTLK	KSPDSDVAVTLK	3	KSPDSDVAVTLK3	87202.6	91761.6	83754
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	KSPDSDVAVTLKK	KSPDSDVAVTLKK	3	KSPDSDVAVTLKK3	17080.2	31813.7	17580.1
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	KSPECDKETSICTDLDGVALCQCK	KSPEC(UniMod:4)DKETSIC(UniMod:4)TDLDGVALC(UniMod:4)QC(UniMod:4)K	3	KSPEC(UniMod:4)DKETSIC(UniMod:4)TDLDGVALC(UniMod:4)QC(UniMod:4)K3	2148.31	2943.53	3945.45
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	KSPECDKETSICTDLDGVALCQCK	KSPEC(UniMod:4)DKETSIC(UniMod:4)TDLDGVALC(UniMod:4)QC(UniMod:4)K	4	KSPEC(UniMod:4)DKETSIC(UniMod:4)TDLDGVALC(UniMod:4)QC(UniMod:4)K4	12357.8	15189.6	18852.4
P63031	A0A8I5ZRY9;P63031	MPC1_RAT	Mpc1	Mitochondrial pyruvate carrier 1	0	KSPEIISGR	KSPEIISGR	2	KSPEIISGR2	22415.2	17005.2	25760.7
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	KSPEYVK	KSPEYVK	2	KSPEYVK2			3023.89
F7F785	F7F785	F7F785_RAT	Tspan32	Tetraspanin	1	KSPFGLLASTGPIMCQGQK	KSPFGLLASTGPIMC(UniMod:4)QGQK	3	KSPFGLLASTGPIMC(UniMod:4)QGQK3	12663.5	18231.4	25088.6
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	KSPGLPTGGTQDQTSK	KSPGLPTGGTQDQTSK	3	KSPGLPTGGTQDQTSK3	15740.4	16158.3	14621.5
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	KSPIGYLPFVEICMK	KSPIGYLPFVEIC(UniMod:4)MK	3	KSPIGYLPFVEIC(UniMod:4)MK3	3877.67	3162.44	4558.08
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	KSPLIESTANMENNQPQK	KSPLIESTANMENNQPQK	3	KSPLIESTANMENNQPQK3	76494.6	97856.1	71619.4
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	KSPLITAWPEELISK	KSPLITAWPEELISK	2	KSPLITAWPEELISK2	2897.64		
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	KSPLITAWPEELISK	KSPLITAWPEELISK	3	KSPLITAWPEELISK3	18309.4	17990.4	30924.3
Q63433	Q63433	PKN1_RAT	Pkn1	Serine/threonine-protein kinase N1	1	KSPLTLEDFK	KSPLTLEDFK	3	KSPLTLEDFK3	5633.5	3686.29	
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	KSPNELVDDLFK	KSPNELVDDLFK	2	KSPNELVDDLFK2	21359.1	28289.4	27212.6
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	KSPNELVDDLFK	KSPNELVDDLFK	3	KSPNELVDDLFK3	84660.7	77594.3	91129.1
P18292	P18292	THRB_RAT	F2	Prothrombin	1	KSPQELLCGASLISDR	KSPQELLC(UniMod:4)GASLISDR	2	KSPQELLC(UniMod:4)GASLISDR2	5.7404e+06	5.70818e+06	5.60606e+06
P18292	P18292	THRB_RAT	F2	Prothrombin	1	KSPQELLCGASLISDR	KSPQELLC(UniMod:4)GASLISDR	3	KSPQELLC(UniMod:4)GASLISDR3	146715	130463	122815
P18292	P18292	THRB_RAT	F2	Prothrombin	1	KSPQELLCGASLISDR	KSPQELLC(UniMod:4)GASLISDR	4	KSPQELLC(UniMod:4)GASLISDR4	17350.8	26782.8	23348.9
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	KSPSADNIHTLTGFAK	KSPSADNIHTLTGFAK	3	KSPSADNIHTLTGFAK3	16630	20907.2	16935.8
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	KSPSRPVSDCQTEPCLEADMGK	KSPSRPVSDC(UniMod:4)QTEPC(UniMod:4)LEADMGK	3	KSPSRPVSDC(UniMod:4)QTEPC(UniMod:4)LEADMGK3	7956.67	9977.4	9989.66
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	KSPSRPVSDCQTEPCLEADMGK	KSPSRPVSDC(UniMod:4)QTEPC(UniMod:4)LEADMGK	4	KSPSRPVSDC(UniMod:4)QTEPC(UniMod:4)LEADMGK4	50841.7	35757.2	39978.8
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	KSPSVADFSTQIR	KSPSVADFSTQIR	3	KSPSVADFSTQIR3	34880.8	36522.1	27733.6
P83888	P83888;A0A8I6A5N2	TBG1_RAT	Tubg1	Tubulin gamma-1 chain	0	KSPYLPSAHR	KSPYLPSAHR	3	KSPYLPSAHR3	26639.9	28454.6	15300.2
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	KSQIFSTASDNQPTVTIK	KSQIFSTASDNQPTVTIK	3	KSQIFSTASDNQPTVTIK3	19380	16233.1	19471
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	KSQNEQDTVLDGDFTVR	KSQNEQDTVLDGDFTVR	3	KSQNEQDTVLDGDFTVR3	81132.1	85791.3	61893.4
F7F8Z1	F7F8Z1	F7F8Z1_RAT	Tbc1d25	TBC1 domain family, member 25	1	KSREYEQLK	KSREYEQLK	2	KSREYEQLK2			46981.9
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	KSSPPEETSYAFLTPR	KSSPPEETSYAFLTPR	3	KSSPPEETSYAFLTPR3	22542.2	21255.2	20415
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	KSTVLQQQYNR	KSTVLQQQYNR	3	KSTVLQQQYNR3	8769.1	9843.57	6343.99
Q6NX65	Q6NX65	PDC10_RAT	Pdcd10	Programmed cell death protein 10	1	KSVEVNFTESLLR	KSVEVNFTESLLR	3	KSVEVNFTESLLR3	6974.75	8220.33	6136.67
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	KSVTDSIRDEYAFLQK	KSVTDSIRDEYAFLQK	4	KSVTDSIRDEYAFLQK4	4411.79	6569.47	6342.17
P02767	P02767	TTHY_RAT	Ttr	Transthyretin	1	KTADGSWEPFASGK	KTADGSWEPFASGK	2	KTADGSWEPFASGK2	14254.4	18044.9	17435.4
P02767	P02767	TTHY_RAT	Ttr	Transthyretin	1	KTADGSWEPFASGK	KTADGSWEPFASGK	3	KTADGSWEPFASGK3	44696.8	51936.5	57777.1
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	KTCEEHQLCVVAVLPHILDTGATGR	KTC(UniMod:4)EEHQLC(UniMod:4)VVAVLPHILDTGATGR	3	KTC(UniMod:4)EEHQLC(UniMod:4)VVAVLPHILDTGATGR3	32215.8		77182.3
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	KTCEEHQLCVVAVLPHILDTGATGR	KTC(UniMod:4)EEHQLC(UniMod:4)VVAVLPHILDTGATGR	4	KTC(UniMod:4)EEHQLC(UniMod:4)VVAVLPHILDTGATGR4	80519.9	110734	84621.9
Q02445	Q02445	TFPI1_RAT	Tfpi	Tissue factor pathway inhibitor	1	KTCIPGYK	KTC(UniMod:4)IPGYK	2	KTC(UniMod:4)IPGYK2	10258.1	17819.5	
P35565	P35565	CALX_RAT	Canx	Calnexin	1	KTDAPQPDVK	KTDAPQPDVK	2	KTDAPQPDVK2	19775.2	12116.4	9870.9
P35565	P35565	CALX_RAT	Canx	Calnexin	1	KTDAPQPDVKDEEGK	KTDAPQPDVKDEEGK	3	KTDAPQPDVKDEEGK3	12843.4	8471.68	8904.16
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	KTDEGTYR	KTDEGTYR	2	KTDEGTYR2			2786.73
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	KTDELPQLVTLPHPNLHGPEILDVPSTVQK	KTDELPQLVTLPHPNLHGPEILDVPSTVQK	4	KTDELPQLVTLPHPNLHGPEILDVPSTVQK4	2.72911e+06	3.17259e+06	2.72571e+06
Q2LC84	Q2LC84	NUMB_RAT	Numb	Protein numb homolog	1	KTDFPIK	KTDFPIK	2	KTDFPIK2	5322.64	3402.01	4016.26
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	KTDNSEIFWNPTPDIK	KTDNSEIFWNPTPDIK	3	KTDNSEIFWNPTPDIK3	12426.3	12123.3	6438.95
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	KTDSFFLEVQK	KTDSFFLEVQK	3	KTDSFFLEVQK3	20958.6	13739	
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	KTDTLLYSVLPPSVANELR	KTDTLLYSVLPPSVANELR	3	KTDTLLYSVLPPSVANELR3	41294.2	45194.7	37618
P01048	P08932;A0A0G2KA54;P01048	KNT1_RAT	Map1	T-kininogen 1	0	KTEEDLCVGCFQPIPMDSSDLKPVLK	KTEEDLC(UniMod:4)VGC(UniMod:4)FQPIPMDSSDLKPVLK	4	KTEEDLC(UniMod:4)VGC(UniMod:4)FQPIPMDSSDLKPVLK4	287579	261070	299877
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	KTEQFEVSVNVAPGSK	KTEQFEVSVNVAPGSK	3	KTEQFEVSVNVAPGSK3	27805.3	27574.1	36364.4
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	KTESHEQTFR	KTESHEQTFR	2	KTESHEQTFR2			6547.59
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	KTESHEQTFR	KTESHEQTFR	3	KTESHEQTFR3			117095
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	KTESHEQTFRVEK	KTESHEQTFRVEK	3	KTESHEQTFRVEK3		6512.05	8692.79
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	KTESHEQTFRVEK	KTESHEQTFRVEK	4	KTESHEQTFRVEK4	8823.49	7859.42	11756.6
P62329	P62329	TYB4_RAT	Tmsb4x	Thymosin beta-4	1	KTETQEKNPLPSK	KTETQEKNPLPSK	3	KTETQEKNPLPSK3	104706	120600	93314.5
P60123	A0A0G2K0H9;P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	0	KTEVLMENFR	KTEVLMENFR	3	KTEVLMENFR3	6978.47	14227.7	7668.08
Q99NA5	Q99NA5	IDH3A_RAT	Idh3a	Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial	1	KTFDLYANVRPCVSIEGYK	KTFDLYANVRPC(UniMod:4)VSIEGYK	4	KTFDLYANVRPC(UniMod:4)VSIEGYK4	20350.8	23117.2	26680.4
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	KTFEINPR	KTFEINPR	2	KTFEINPR2	28252.7	36617.4	33610.6
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	KTGCNVLLIQK	KTGC(UniMod:4)NVLLIQK	3	KTGC(UniMod:4)NVLLIQK3	4408.71	6061.04	8183.35
Q9WVK7	Q9WVK7	HCDH_RAT	Hadh	Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial	1	KTGEGFYK	KTGEGFYK	2	KTGEGFYK2	5757.24	5197.77	3061.21
P62898	D4A5L9;P62898	CYC_RAT	Cycs	Cytochrome c, somatic	0	KTGQAAGFSYTDANK	KTGQAAGFSYTDANK	3	KTGQAAGFSYTDANK3	2615.21	6371.81	6038.82
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	KTGSPGSPSAGGVQSTAK	KTGSPGSPSAGGVQSTAK	3	KTGSPGSPSAGGVQSTAK3	2066.65		3963.93
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	KTHIQDNHDGTYTVAYVPDVTGR	KTHIQDNHDGTYTVAYVPDVTGR	3	KTHIQDNHDGTYTVAYVPDVTGR3	107764	98961.7	124246
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	KTHIQDNHDGTYTVAYVPDVTGR	KTHIQDNHDGTYTVAYVPDVTGR	4	KTHIQDNHDGTYTVAYVPDVTGR4	1.29875e+06	1.52852e+06	1.61294e+06
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	KTIQGDEEDLR	KTIQGDEEDLR	3	KTIQGDEEDLR3	7749.15	9069.32	8308.61
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	KTIYLVSFFEGLQR	KTIYLVSFFEGLQR	3	KTIYLVSFFEGLQR3	4488.92	3435.25	3652.09
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	KTKPYIQVDIGGGQTK	KTKPYIQVDIGGGQTK	2	KTKPYIQVDIGGGQTK2	2887.16	5459.35	3037.88
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	KTKPYIQVDIGGGQTK	KTKPYIQVDIGGGQTK	3	KTKPYIQVDIGGGQTK3	91020.7	110656	80703.7
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	KTKPYIQVDIGGGQTK	KTKPYIQVDIGGGQTK	4	KTKPYIQVDIGGGQTK4	101407	120258	78606.3
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	KTLDGELDEK	KTLDGELDEK	3	KTLDGELDEK3	8563.63	6642.15	8374.63
Q64542	Q64542	AT2B4_RAT	Atp2b4	Plasma membrane calcium-transporting ATPase 4	1	KTLDKDPMLLSGTHVMEGSGR	KTLDKDPMLLSGTHVMEGSGR	4	KTLDKDPMLLSGTHVMEGSGR4	4759.54	4051.87	1805.75
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	KTLDMIK	KTLDMIK	2	KTLDMIK2	168540	189510	147613
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	KTLDMIKK	KTLDMIKK	2	KTLDMIKK2	2100.85	5758.75	6295.31
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	KTLDNVAIAEEEK	KTLDNVAIAEEEK	3	KTLDNVAIAEEEK3	30240.6	38333.6	31521.1
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KTLEDEAK	KTLEDEAK	1	KTLEDEAK1	56406.1		48984.7
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KTLEDEAK	KTLEDEAK	2	KTLEDEAK2	625788		1.10994e+06
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	KTLEQHDNIVTHYK	KTLEQHDNIVTHYK	4	KTLEQHDNIVTHYK4	17698.8	19346.2	3739.74
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	KTLFSVLPGLK	KTLFSVLPGLK	2	KTLFSVLPGLK2	4418.65	6895.65	6933
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	KTLFSVLPGLK	KTLFSVLPGLK	3	KTLFSVLPGLK3	40124.7	41084.6	43179.3
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	KTLIDVLQPLIAEHQAR	KTLIDVLQPLIAEHQAR	4	KTLIDVLQPLIAEHQAR4	5338.19	1190.4	7207.84
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	KTLNPHYNHTFVYNGVR	KTLNPHYNHTFVYNGVR	4	KTLNPHYNHTFVYNGVR4	6842.39	7238.29	12278.5
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	KTMEALEFHTVPLK	KTMEALEFHTVPLK	4	KTMEALEFHTVPLK4	598.494	2027.43	1676.78
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	KTNNPQFDEVFYFEVTRPCSYSK	KTNNPQFDEVFYFEVTRPC(UniMod:4)SYSK	3	KTNNPQFDEVFYFEVTRPC(UniMod:4)SYSK3	11752.7	10473.5	8450.12
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	KTNNPQFDEVFYFEVTRPCSYSK	KTNNPQFDEVFYFEVTRPC(UniMod:4)SYSK	4	KTNNPQFDEVFYFEVTRPC(UniMod:4)SYSK4	25717	27318.8	25455.4
Q66H59	Q66H59	NPL_RAT	Npl	N-acetylneuraminate lyase	1	KTNQMLEAFEQK	KTNQMLEAFEQK	3	KTNQMLEAFEQK3	14600.9	8333.9	15675.9
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	KTPDTSLLASHMLAR	KTPDTSLLASHMLAR	4	KTPDTSLLASHMLAR4	7724.15	8336.85	2466.57
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	KTPEYDYQWPRDDQDEVDCEK	KTPEYDYQWPRDDQDEVDC(UniMod:4)EK	4	KTPEYDYQWPRDDQDEVDC(UniMod:4)EK4	4759.11	5259.63	4916.13
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	KTPFIDMFNSVPLR	KTPFIDMFNSVPLR	3	KTPFIDMFNSVPLR3	21319.6	25631.5	29111.2
Q9ES40	Q9ES40	PRAF3_RAT	Arl6ip5	PRA1 family protein 3	1	KTPMGIILDALEQQEDSINK	KTPMGIILDALEQQEDSINK	3	KTPMGIILDALEQQEDSINK3	150505	176276	179344
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	KTPPVNAK	KTPPVNAK	2	KTPPVNAK2			52695.9
Q5XIM5	A0A8I6A6V4;Q5XIM5	CDV3_RAT	Cdv3	Protein CDV3 homolog	0	KTPQGPPEIYSDTQFPSLQSTAK	KTPQGPPEIYSDTQFPSLQSTAK	3	KTPQGPPEIYSDTQFPSLQSTAK3	4363.35	4597.37	
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	KTPQQLESK	KTPQQLESK	2	KTPQQLESK2			34864.1
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	KTPSNSLVMTTTVSHNIVK	KTPSNSLVMTTTVSHNIVK	3	KTPSNSLVMTTTVSHNIVK3	4791.66	6430.6	3774.63
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	KTPSNSLVMTTTVSHNIVK	KTPSNSLVMTTTVSHNIVK	4	KTPSNSLVMTTTVSHNIVK4	6133.21	9197.95	2774.67
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	KTPSNSLVMTTTVSHNIVKPFR	KTPSNSLVMTTTVSHNIVKPFR	3	KTPSNSLVMTTTVSHNIVKPFR3	31737.2	26336.6	29209
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	KTPSNSLVMTTTVSHNIVKPFR	KTPSNSLVMTTTVSHNIVKPFR	4	KTPSNSLVMTTTVSHNIVKPFR4	530058	555194	520967
A0A140UHX9	A0A140UHX9	A0A140UHX9_RAT	Ccz1	CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated	1	KTPSVSLTSVHPDLMK	KTPSVSLTSVHPDLMK	4	KTPSVSLTSVHPDLMK4	13473.5	11069.1	6407.5
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	KTPTEAPADCR	KTPTEAPADC(UniMod:4)R	2	KTPTEAPADC(UniMod:4)R2			12178.2
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	KTPTEAPADCR	KTPTEAPADC(UniMod:4)R	3	KTPTEAPADC(UniMod:4)R3			27623.7
P80431	P80431	COX7B_RAT	Cox7b	Cytochrome c oxidase subunit 7B, mitochondrial	1	KTPTFHDK	KTPTFHDK	2	KTPTFHDK2	44452.9		42588.4
P35281	P35281	RAB10_RAT	Rab10	Ras-related protein Rab-10	1	KTPVKEPNSENVDISSGGGVTGWK	KTPVKEPNSENVDISSGGGVTGWK	3	KTPVKEPNSENVDISSGGGVTGWK3	36982.3	25568.7	38813.6
P35281	P35281	RAB10_RAT	Rab10	Ras-related protein Rab-10	1	KTPVKEPNSENVDISSGGGVTGWK	KTPVKEPNSENVDISSGGGVTGWK	4	KTPVKEPNSENVDISSGGGVTGWK4	72356.8	70556.5	69028.1
Q62636	Q62636	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	1	KTPVPGK	KTPVPGK	1	KTPVPGK1			37076.9
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	KTPVTVTLK	KTPVTVTLK	2	KTPVTVTLK2	109535	79296.8	91178.1
Q99MZ8	Q99MZ8	LASP1_RAT	Lasp1	LIM and SH3 domain protein 1	1	KTQDQISNIK	KTQDQISNIK	2	KTQDQISNIK2	10651.1	11672.1	9392.35
Q99MZ8	Q99MZ8	LASP1_RAT	Lasp1	LIM and SH3 domain protein 1	1	KTQDQISNIK	KTQDQISNIK	3	KTQDQISNIK3	76262.2	49373.5	60825.3
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	KTQELAFATHQDPADPK	KTQELAFATHQDPADPK	3	KTQELAFATHQDPADPK3	3173.63	7950.08	5707.74
O35763	O35763	MOES_RAT	Msn	Moesin	1	KTQEQLASEMAELTAR	KTQEQLASEMAELTAR	2	KTQEQLASEMAELTAR2	2447.5		
O35763	O35763	MOES_RAT	Msn	Moesin	1	KTQEQLASEMAELTAR	KTQEQLASEMAELTAR	3	KTQEQLASEMAELTAR3	38292.2	27993.8	45850.5
Q08850	Q08850	STX4_RAT	Stx4	Syntaxin-4	1	KTQHGVLSQQFVELINK	KTQHGVLSQQFVELINK	3	KTQHGVLSQQFVELINK3	2569.31		10136.5
Q08850	Q08850	STX4_RAT	Stx4	Syntaxin-4	1	KTQHGVLSQQFVELINK	KTQHGVLSQQFVELINK	4	KTQHGVLSQQFVELINK4	11943	12788.9	10181
Q5PQK5	Q5PQK5	Q5PQK5_RAT	Rdx	Radixin	1	KTQNDVLHAENVK	KTQNDVLHAENVK	3	KTQNDVLHAENVK3	3618.01	3709.52	
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	KTQPPVLQAAHR	KTQPPVLQAAHR	3	KTQPPVLQAAHR3	2802.54		3424.46
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	KTQVALIQYANDPR	KTQVALIQYANDPR	3	KTQVALIQYANDPR3	6912.88	3001.51	6720.71
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	KTSFGSLKDEDR	KTSFGSLKDEDR	3	KTSFGSLKDEDR3	10031.7	7561.13	10762.7
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	KTSHLECIR	KTSHLEC(UniMod:4)IR	3	KTSHLEC(UniMod:4)IR3	4427.12	8001.15	13361.2
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	KTSTSGAISELTESR	KTSTSGAISELTESR	3	KTSTSGAISELTESR3	4687.41	5733.48	3405.3
B0LT89	B0LT89;A0A8I6GBQ0	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	0	KTSYLTELIDR	KTSYLTELIDR	3	KTSYLTELIDR3	44836.2	54073.7	32977.6
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	KTSYQDCIK	KTSYQDC(UniMod:4)IK	2	KTSYQDC(UniMod:4)IK2	50066.6	50776.4	34186.8
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	KTSYQDCIK	KTSYQDC(UniMod:4)IK	3	KTSYQDC(UniMod:4)IK3	114598	160700	160772
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	KTTDTASVQNEAK	KTTDTASVQNEAK	2	KTTDTASVQNEAK2			1788.14
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	KTTDTASVQNEAK	KTTDTASVQNEAK	3	KTTDTASVQNEAK3	17977.8		60956.6
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	KTTEELNEALSAK	KTTEELNEALSAK	3	KTTEELNEALSAK3	6429.78	2222.45	6638.13
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	KTTFQLELPVK	KTTFQLELPVK	3	KTTFQLELPVK3	6727.34	7625.02	
P05426	P05426;F1LUE9	RL7_RAT	Rpl7	Large ribosomal subunit protein uL30	0	KTTHFVEGGDAGNREDQINR	KTTHFVEGGDAGNREDQINR	4	KTTHFVEGGDAGNREDQINR4	4788.74	3611.15	3308.82
O35763	O35763	MOES_RAT	Msn	Moesin	1	KTTNDMIHAENMR	KTTNDMIHAENMR	2	KTTNDMIHAENMR2	2286.02	1062.1	
O35763	O35763	MOES_RAT	Msn	Moesin	1	KTTNDMIHAENMR	KTTNDMIHAENMR	3	KTTNDMIHAENMR3	27891.4	26125.6	38481
O35763	O35763	MOES_RAT	Msn	Moesin	1	KTTNDMIHAENMR	KTTNDMIHAENMR	4	KTTNDMIHAENMR4	21152	32284.8	35371.4
P10252	P10252	CD48_RAT	Cd48	CD48 antigen	1	KTVFESVFK	KTVFESVFK	2	KTVFESVFK2	49033.8	45708	53641.5
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	KTVLGVPEVLLGILPGAGGTQR	KTVLGVPEVLLGILPGAGGTQR	3	KTVLGVPEVLLGILPGAGGTQR3	5818.19	11351.1	12143.6
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	KTVNNPYVLMVLYK	KTVNNPYVLMVLYK	3	KTVNNPYVLMVLYK3	19478.7	12358	12864.2
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	KTVSWAVTPK	KTVSWAVTPK	2	KTVSWAVTPK2	19819.2	21026.6	21138.9
P20909	P20909	COBA1_RAT	Col11a1	Collagen alpha-1(XI) chain	1	KTVTMIVDCK	KTVTMIVDC(UniMod:4)K	3	KTVTMIVDC(UniMod:4)K3	8389.33	8470.75	
P35281	P35281	RAB10_RAT	Rab10	Ras-related protein Rab-10	1	KTYDLLFK	KTYDLLFK	2	KTYDLLFK2	58042.7	47180.2	50853
P01946	P01946	HBA_RAT	Hba1	Hemoglobin subunit alpha-1/2	1	KVADALAK	KVADALAK	2	KVADALAK2	297944	300612	288714
A0A8I6AIV4	A0A8I5YB95;A0A8I6AIV4	A0A8I6AIV4_RAT	Dctn3l1	Dynactin 3-like 1	0	KVADGLVK	KVADGLVK	2	KVADGLVK2	30825.8	48483.7	43296.4
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	KVAETAVQLFISGDK	KVAETAVQLFISGDK	3	KVAETAVQLFISGDK3	4481.31	2976.45	3072.67
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	KVAGMDVELTVEER	KVAGMDVELTVEER	3	KVAGMDVELTVEER3	2402.33	4180.02	
Q9R1Q2	Q9R1Q2	CCNL1_RAT	Ccnl1	Cyclin-L1	1	KVALQEAK	KVALQEAK	2	KVALQEAK2			932.118
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	KVASNFPVDLSR	KVASNFPVDLSR	3	KVASNFPVDLSR3	7222.82	10422.8	12776.6
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	KVCGDPEVTVDALR	KVC(UniMod:4)GDPEVTVDALR	3	KVC(UniMod:4)GDPEVTVDALR3	35261.6		35388.6
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	KVCGDPEVTVDALRK	KVC(UniMod:4)GDPEVTVDALRK	3	KVC(UniMod:4)GDPEVTVDALRK3	6511.83	10552.6	8987.68
A0A8I5ZNI3	A0A8I5ZNI3	A0A8I5ZNI3_RAT	Glipr1	GLI pathogenesis-related 1	1	KVCGHYTQIVWADSYK	KVC(UniMod:4)GHYTQIVWADSYK	4	KVC(UniMod:4)GHYTQIVWADSYK4	6564.06	3769.89	3727.38
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	KVDDIICDSR	KVDDIIC(UniMod:4)DSR	2	KVDDIIC(UniMod:4)DSR2	4762.75	4980.18	1901.29
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	KVDDIICDSR	KVDDIIC(UniMod:4)DSR	3	KVDDIIC(UniMod:4)DSR3	11253.1	14531.5	14071.8
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	KVDEAIALFQK	KVDEAIALFQK	3	KVDEAIALFQK3	15782.7	14056	6897.8
Q3T1K5	Q3T1K5	CAZA2_RAT	Capza2	F-actin-capping protein subunit alpha-2	1	KVDGQQTIIACIESHQFQAK	KVDGQQTIIAC(UniMod:4)IESHQFQAK	3	KVDGQQTIIAC(UniMod:4)IESHQFQAK3	4121.13	10939.8	11662.6
Q3T1K5	Q3T1K5	CAZA2_RAT	Capza2	F-actin-capping protein subunit alpha-2	1	KVDGQQTIIACIESHQFQAK	KVDGQQTIIAC(UniMod:4)IESHQFQAK	4	KVDGQQTIIAC(UniMod:4)IESHQFQAK4	38961.7	38119.3	37654.2
A0A8I5ZTN5	A0A8I5ZTN5	A0A8I5ZTN5_RAT	Adsl	Adenylosuccinate lyase	1	KVDIEVLSVLASLGASVHK	KVDIEVLSVLASLGASVHK	3	KVDIEVLSVLASLGASVHK3	8230.34	2808.1	
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	KVDQPPEAK	KVDQPPEAK	2	KVDQPPEAK2			7068.74
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	KVDVYGFVSR	KVDVYGFVSR	3	KVDVYGFVSR3	12520.9	18806.9	15680
P68182	P68182;P27791	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	0	KVEAPFIPK	KVEAPFIPK	2	KVEAPFIPK2	278488	100160	203252
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KVEAQLQELQVK	KVEAQLQELQVK	2	KVEAQLQELQVK2	383436	431670	380145
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	KVEAQLQELQVK	KVEAQLQELQVK	3	KVEAQLQELQVK3	2.92424e+06	3.46507e+06	3.76661e+06
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	KVEDLFLTFAK	KVEDLFLTFAK	2	KVEDLFLTFAK2	92924.6	82936.4	83737.2
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	KVEDLFLTFAK	KVEDLFLTFAK	3	KVEDLFLTFAK3	272393	294339	280255
O55156	O55156;Q9JK25	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	0	KVEDLQFR	KVEDLQFR	2	KVEDLQFR2	5803.84	8653.49	
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	KVEDMMK	KVEDMMK	2	KVEDMMK2	41560.3	61401.9	52096
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	KVEEENQGAIDMIK	KVEEENQGAIDMIK	3	KVEEENQGAIDMIK3	10385.9	8509.85	4837.85
E9PT79	E9PT79	E9PT79_RAT	Tsn	Translin	1	KVEEVVYDLSIR	KVEEVVYDLSIR	3	KVEEVVYDLSIR3	3267.67	6081.49	4411.67
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	KVESALIK	KVESALIK	2	KVESALIK2	18174.8	22656.6	23590
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	KVESALIKPINPR	KVESALIKPINPR	2	KVESALIKPINPR2	10153	7138.57	7274.39
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	KVESALIKPINPR	KVESALIKPINPR	3	KVESALIKPINPR3	715964	811845	831690
P31000	P31000	VIME_RAT	Vim	Vimentin	1	KVESLQEEIAFLK	KVESLQEEIAFLK	3	KVESLQEEIAFLK3	1743.35	2703.35	1407.39
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	KVETDHIVTAVGLEPNVELAK	KVETDHIVTAVGLEPNVELAK	3	KVETDHIVTAVGLEPNVELAK3	20706.5	11526	12456
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	KVETDHIVTAVGLEPNVELAK	KVETDHIVTAVGLEPNVELAK	4	KVETDHIVTAVGLEPNVELAK4	21375.6	17471.6	19359.2
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	KVEYSHGDVVEYDCKPR	KVEYSHGDVVEYDC(UniMod:4)KPR	3	KVEYSHGDVVEYDC(UniMod:4)KPR3	7509.83	2341.14	8704.66
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	KVEYSHGDVVEYDCKPR	KVEYSHGDVVEYDC(UniMod:4)KPR	4	KVEYSHGDVVEYDC(UniMod:4)KPR4	66474.8	72112.3	52786.7
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	KVEYTLGEESEAPGQR	KVEYTLGEESEAPGQR	2	KVEYTLGEESEAPGQR2	2499.37	4009.37	4203.92
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	KVEYTLGEESEAPGQR	KVEYTLGEESEAPGQR	3	KVEYTLGEESEAPGQR3	32897.3	38806.4	38213.8
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	KVFASLPQVER	KVFASLPQVER	3	KVFASLPQVER3	37818.3	34202.8	35381.8
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	KVFNHCFTGSGVIDWLVSNK	KVFNHC(UniMod:4)FTGSGVIDWLVSNK	3	KVFNHC(UniMod:4)FTGSGVIDWLVSNK3	29041.7	27316.5	19509.5
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	KVFNHCFTGSGVIDWLVSNK	KVFNHC(UniMod:4)FTGSGVIDWLVSNK	4	KVFNHC(UniMod:4)FTGSGVIDWLVSNK4	59714.4	105563	55760.4
P05544	P05544;P09005	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	KVFSQQADLSR	KVFSQQADLSR	2	KVFSQQADLSR2	12160	15036.8	9312.93
P05544	P05544;P09005	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	KVFSQQADLSR	KVFSQQADLSR	3	KVFSQQADLSR3	122933	145451	153721
P23358	M0R4B6;P23358;A0A8I6A1H0;D3ZJE2;D4A8N3;A0A8I5YBG2	RL12_RAT	Rpl12	Large ribosomal subunit protein uL11	0	KVGDDIAK	KVGDDIAK	2	KVGDDIAK2	23837.7	4245.07	3490.66
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	KVGYTPDWIFLLR	KVGYTPDWIFLLR	2	KVGYTPDWIFLLR2	6006.45	5740.39	5799.22
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	KVGYTPDWIFLLR	KVGYTPDWIFLLR	3	KVGYTPDWIFLLR3	40787.5	78445.6	67750.7
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	KVHVIFNYK	KVHVIFNYK	2	KVHVIFNYK2	17028.6	25204.5	23058.9
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	KVHVIFNYK	KVHVIFNYK	3	KVHVIFNYK3	482967	527655	622902
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	KVIDPVAPR	KVIDPVAPR	2	KVIDPVAPR2	9273.65	10122.9	3907.03
P28075	P28075	PSB5_RAT	Psmb5	Proteasome subunit beta type-5	1	KVIEINPYLLGTMAGGAADCSFWER	KVIEINPYLLGTMAGGAADC(UniMod:4)SFWER	3	KVIEINPYLLGTMAGGAADC(UniMod:4)SFWER3	17957	17666.6	16601.6
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	KVILIPVGIGPHANLK	KVILIPVGIGPHANLK	2	KVILIPVGIGPHANLK2	12878	11166.2	5266.64
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	KVILIPVGIGPHANLK	KVILIPVGIGPHANLK	3	KVILIPVGIGPHANLK3	130001	149029	154159
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	KVILIPVGIGPHANLK	KVILIPVGIGPHANLK	4	KVILIPVGIGPHANLK4	154530	159727	157023
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	KVILPDLAVLR	KVILPDLAVLR	2	KVILPDLAVLR2	2336.9	4785.06	
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	KVILPDLAVLR	KVILPDLAVLR	3	KVILPDLAVLR3	7455.45	8448.6	10495.9
P02091	P11517;P02091	HBB1_RAT	Hbb	Hemoglobin subunit beta-1	0	KVINAFNDGLK	KVINAFNDGLK	2	KVINAFNDGLK2	15461	40503	38277.6
P02091	P11517;P02091	HBB1_RAT	Hbb	Hemoglobin subunit beta-1	0	KVINAFNDGLK	KVINAFNDGLK	3	KVINAFNDGLK3	66881.7	77166.2	78163.5
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	KVINDYVEK	KVINDYVEK	2	KVINDYVEK2	1.38437e+06	915688	1.56676e+06
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	KVIPIISK	KVIPIISK	2	KVIPIISK2	11130.8	16903.2	16501.1
Q62812	Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	KVIQYLAHVASSHK	KVIQYLAHVASSHK	2	KVIQYLAHVASSHK2	3044.1	4639.07	
Q62812	Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	KVIQYLAHVASSHK	KVIQYLAHVASSHK	3	KVIQYLAHVASSHK3	26010.7	24179	22233.5
Q62812	Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	KVIQYLAHVASSHK	KVIQYLAHVASSHK	4	KVIQYLAHVASSHK4	239187	381646	280452
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	KVITFNR	KVITFNR	2	KVITFNR2	26629.6	25373.1	20763.3
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	KVIVGGVDLLAK	KVIVGGVDLLAK	2	KVIVGGVDLLAK2	1636.84	4317.65	2191.04
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	KVIVGGVDLLAK	KVIVGGVDLLAK	3	KVIVGGVDLLAK3	13099.3	20619.4	15663.8
B4F795	B4F795	CTL2_RAT	Slc44a2	Choline transporter-like protein 2	1	KVIYPTDSR	KVIYPTDSR	2	KVIYPTDSR2	34750.9	12584.5	14928.8
Q9JHY1	A0A8I6AER7;Q9JHY1	JAM1_RAT	F11r	Junctional adhesion molecule A	0	KVIYSQPSAR	KVIYSQPSAR	2	KVIYSQPSAR2	19081.8	22378.1	21732.7
Q9JHY1	A0A8I6AER7;Q9JHY1	JAM1_RAT	F11r	Junctional adhesion molecule A	0	KVIYSQPSAR	KVIYSQPSAR	3	KVIYSQPSAR3	74538.5	77895.7	99042.4
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	KVKPQPPLSDAYLSGMPAK	KVKPQPPLSDAYLSGMPAK	3	KVKPQPPLSDAYLSGMPAK3	2108.52		3402.05
P56571	P56571	ES1_RAT		ES1 protein homolog, mitochondrial	1	KVLELTGK	KVLELTGK	2	KVLELTGK2	6673.05	8998.7	13441
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	KVLFHTDLVNPR	KVLFHTDLVNPR	3	KVLFHTDLVNPR3			1958.38
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	KVLFYEEELVR	KVLFYEEELVR	3	KVLFYEEELVR3	6231.42	5943.57	5561.79
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	KVLFYEEELVRR	KVLFYEEELVRR	3	KVLFYEEELVRR3		14033.4	12050.1
P01026	P01026	CO3_RAT	C3	Complement C3	1	KVLMDGVRPSSPEALVGK	KVLMDGVRPSSPEALVGK	2	KVLMDGVRPSSPEALVGK2	2839.84		
P01026	P01026	CO3_RAT	C3	Complement C3	1	KVLMDGVRPSSPEALVGK	KVLMDGVRPSSPEALVGK	3	KVLMDGVRPSSPEALVGK3	42727.2	27962.9	42257.9
P01026	P01026	CO3_RAT	C3	Complement C3	1	KVLMDGVRPSSPEALVGK	KVLMDGVRPSSPEALVGK	4	KVLMDGVRPSSPEALVGK4	34810.5	39964.5	42385.7
D4A1Y5	D4A1Y5	D4A1Y5_RAT	Mthfd2	methenyltetrahydrofolate cyclohydrolase	1	KVLRPEELEVLK	KVLRPEELEVLK	3	KVLRPEELEVLK3	11333.6	18614	12341.8
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	KVLTGVAGEDAECHAAK	KVLTGVAGEDAEC(UniMod:4)HAAK	3	KVLTGVAGEDAEC(UniMod:4)HAAK3	3607.15	8946.7	6194.48
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	KVLTGVAGEDAECHAAK	KVLTGVAGEDAEC(UniMod:4)HAAK	4	KVLTGVAGEDAEC(UniMod:4)HAAK4	8837.31	9936.53	13519.2
Q6P6Q9	Q6P6Q9	MICU1_RAT	Micu1	Calcium uptake protein 1, mitochondrial	1	KVMEYENR	KVMEYENR	2	KVMEYENR2		2087.14	
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	KVMSQEIQEQLHK	KVMSQEIQEQLHK	3	KVMSQEIQEQLHK3	4999.29	6064.45	6525.56
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	KVNAVFEWHITK	KVNAVFEWHITK	3	KVNAVFEWHITK3	3343.02	2199.51	3477.82
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	KVNDKNPHVALYALEVMESVVK	KVNDKNPHVALYALEVMESVVK	4	KVNDKNPHVALYALEVMESVVK4		3270.95	4970.99
Q5XIL4	Q5XIL4	Q5XIL4_RAT	Sorbs3	Sorbin and SH3 domain containing 3	1	KVNEHWYEGR	KVNEHWYEGR	3	KVNEHWYEGR3	14939.7	15276.7	26454.5
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	KVNIDFEPFKPINTSLYLCDNK	KVNIDFEPFKPINTSLYLC(UniMod:4)DNK	3	KVNIDFEPFKPINTSLYLC(UniMod:4)DNK3	12147.6	5465.63	6080.44
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	KVNIDFEPFKPINTSLYLCDNK	KVNIDFEPFKPINTSLYLC(UniMod:4)DNK	4	KVNIDFEPFKPINTSLYLC(UniMod:4)DNK4	35686.8	21602	24343.7
Q9R063	Q9R063	PRDX5_RAT	Prdx5	Peroxiredoxin-5, mitochondrial	1	KVNLAELFK	KVNLAELFK	2	KVNLAELFK2	33398.2	37427	51696.6
D4A1B2	D4A1B2	D4A1B2_RAT	Arpin	Arpin	1	KVNTGFLMSSFK	KVNTGFLMSSFK	3	KVNTGFLMSSFK3	51964.1	49949.6	49112.3
A0A8I5ZXX2	A0A8I5ZXX2	A0A8I5ZXX2_RAT	Kdm3b	Lysine-specific demethylase	1	KVPAESMPTLTPAFPR	KVPAESMPTLTPAFPR	3	KVPAESMPTLTPAFPR3		4635.46	3958.09
P05426	A0A8I5ZP24;P05426	RL7_RAT	Rpl7	Large ribosomal subunit protein uL30	0	KVPAVPETLKK	KVPAVPETLKK	3	KVPAVPETLKK3	19137.7	30080.1	
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	KVPAVTLTANIIWFPDNFLIHK	KVPAVTLTANIIWFPDNFLIHK	4	KVPAVTLTANIIWFPDNFLIHK4	1287.33	5344.15	
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	KVPDNQQFLDLR	KVPDNQQFLDLR	2	KVPDNQQFLDLR2	25184.3	21047.7	36457.3
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	KVPDNQQFLDLR	KVPDNQQFLDLR	3	KVPDNQQFLDLR3	88034.1	101098	103016
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	KVPELMEMFLPATK	KVPELMEMFLPATK	2	KVPELMEMFLPATK2	58704.9	47249.8	46153.6
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	KVPELMEMFLPATK	KVPELMEMFLPATK	3	KVPELMEMFLPATK3	127938	135403	127150
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	KVPEMSSVASR	KVPEMSSVASR	2	KVPEMSSVASR2	12258.2	5706.5	10263.5
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	KVPEMSSVASR	KVPEMSSVASR	3	KVPEMSSVASR3	10204.8		11247.8
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	KVPEQPPVLPQLDSQHL	KVPEQPPVLPQLDSQHL	2	KVPEQPPVLPQLDSQHL2	14574.6	11929.9	10695.5
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	KVPEQPPVLPQLDSQHL	KVPEQPPVLPQLDSQHL	3	KVPEQPPVLPQLDSQHL3	107179	131350	127119
Q80WE1	Q80WE1	FMR1_RAT	Fmr1	Fragile X messenger ribonucleoprotein 1	1	KVPGVTAIDLDEDTCTFHIYGEDQDAVK	KVPGVTAIDLDEDTC(UniMod:4)TFHIYGEDQDAVK	4	KVPGVTAIDLDEDTC(UniMod:4)TFHIYGEDQDAVK4	2263.06	5201.48	
Q5XI81	Q5XI81	FXR1_RAT	Fxr1	RNA-binding protein FXR1	1	KVPGVTAIELDEDTGTFR	KVPGVTAIELDEDTGTFR	3	KVPGVTAIELDEDTGTFR3	21422.3	21950.6	19888.8
A0A8J8YNR6	A0A8J8YNR6	A0A8J8YNR6_RAT	Fxr2	FMR1 autosomal homolog 2	1	KVPGVTAIELGEETCTFR	KVPGVTAIELGEETC(UniMod:4)TFR	3	KVPGVTAIELGEETC(UniMod:4)TFR3	9727.98	7090.04	15271.7
Q9QYF3	Q9QYF3	MYO5A_RAT	Myo5a	Unconventional myosin-Va	1	KVPLDMSLFLK	KVPLDMSLFLK	3	KVPLDMSLFLK3	6115.39	4659.47	
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	KVPLQEGPK	KVPLQEGPK	2	KVPLQEGPK2	149946	169589	120101
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	KVPTIFLSK	KVPTIFLSK	2	KVPTIFLSK2	84274.3	91626.2	57478.9
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	KVPTSNTEGGWSCSLAEYIR	KVPTSNTEGGWSC(UniMod:4)SLAEYIR	3	KVPTSNTEGGWSC(UniMod:4)SLAEYIR3		3165.6	15351.2
Q4KM74	Q4KM74	SC22B_RAT	Sec22b	Vesicle-trafficking protein SEC22b	1	KVPTVSRPYSFIEFDTFIQK	KVPTVSRPYSFIEFDTFIQK	4	KVPTVSRPYSFIEFDTFIQK4	39667.5	46011	56095.8
P21588	P21588	5NTD_RAT	Nt5e	5'-nucleotidase	1	KVPVVQAYAFGK	KVPVVQAYAFGK	3	KVPVVQAYAFGK3		3044.92	5579.28
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	KVQDLTALLSSK	KVQDLTALLSSK	3	KVQDLTALLSSK3	11171.5	10128.4	6258.66
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	KVQFAPETPGPQPSAETTR	KVQFAPETPGPQPSAETTR	3	KVQFAPETPGPQPSAETTR3	53049.4	49308.4	56859.5
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	KVQGGALEESR	KVQGGALEESR	2	KVQGGALEESR2	20545.1	19634.8	11011.5
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	KVQGGALEESR	KVQGGALEESR	3	KVQGGALEESR3	63464.7	83664.9	81760.8
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	KVQLTPGQTEVK	KVQLTPGQTEVK	3	KVQLTPGQTEVK3	19924.8	18235.5	23960.3
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	KVQSGNINAAK	KVQSGNINAAK	2	KVQSGNINAAK2			20518.8
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	KVSCPIMPCSNATVPDGECCPR	KVSC(UniMod:4)PIMPC(UniMod:4)SNATVPDGEC(UniMod:4)C(UniMod:4)PR	3	KVSC(UniMod:4)PIMPC(UniMod:4)SNATVPDGEC(UniMod:4)C(UniMod:4)PR3	5587.92	8086.98	4350.99
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	KVSGLDGIAIQQISAGTSHSLAWTALPR	KVSGLDGIAIQQISAGTSHSLAWTALPR	4	KVSGLDGIAIQQISAGTSHSLAWTALPR4	1367.79		
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	KVSNLENEAR	KVSNLENEAR	3	KVSNLENEAR3		8671.78	14194.4
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	KVSQPIEGHAASFAQFK	KVSQPIEGHAASFAQFK	3	KVSQPIEGHAASFAQFK3	9366.98	11388.1	8975.72
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	KVSQPIEGHAASFAQFK	KVSQPIEGHAASFAQFK	4	KVSQPIEGHAASFAQFK4	11793	15744	5705.55
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	KVSVTVDYIRPASPATETVPAFSER	KVSVTVDYIRPASPATETVPAFSER	4	KVSVTVDYIRPASPATETVPAFSER4	13655.1		16265.3
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	KVTAIVTQGCK	KVTAIVTQGC(UniMod:4)K	2	KVTAIVTQGC(UniMod:4)K2	76378.6	110064	72562.7
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	KVTAIVTQGCK	KVTAIVTQGC(UniMod:4)K	3	KVTAIVTQGC(UniMod:4)K3	139409	244873	190734
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	KVTDPSVAK	KVTDPSVAK	2	KVTDPSVAK2	7479.03		9485.83
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	KVTEDLSK	KVTEDLSK	2	KVTEDLSK2	7237.57		
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	KVTEENR	KVTEENR	2	KVTEENR2		1069.01	22538.6
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	KVTEENRELASELR	KVTEENRELASELR	2	KVTEENRELASELR2	5582.73	5079.93	
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	KVTEENRELASELR	KVTEENRELASELR	3	KVTEENRELASELR3	290153	402806	426272
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	KVTEENRELASELR	KVTEENRELASELR	4	KVTEENRELASELR4	78400.6	136797	116199
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	KVTELLK	KVTELLK	2	KVTELLK2	19138	39420.2	63778.9
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	KVTELTLK	KVTELTLK	2	KVTELTLK2	9997.39	8441.8	15585.2
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	KVTGIITQGAR	KVTGIITQGAR	3	KVTGIITQGAR3	6329.63	3695.54	3495.98
O35806	O35806	LTBP2_RAT	Ltbp2	Latent-transforming growth factor beta-binding protein 2	1	KVTNDVCSQPLR	KVTNDVC(UniMod:4)SQPLR	3	KVTNDVC(UniMod:4)SQPLR3	2666.33	2566.04	3924.47
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	KVTQDMICAGEK	KVTQDMIC(UniMod:4)AGEK	2	KVTQDMIC(UniMod:4)AGEK2	33111.5	49520.3	32713.3
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	KVTQDMICAGEK	KVTQDMIC(UniMod:4)AGEK	3	KVTQDMIC(UniMod:4)AGEK3	971547	751399	705203
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	KVTQDMICAGEKEGGK	KVTQDMIC(UniMod:4)AGEKEGGK	3	KVTQDMIC(UniMod:4)AGEKEGGK3	3645.62	14612	25396.5
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	KVTQDMICAGEKEGGK	KVTQDMIC(UniMod:4)AGEKEGGK	4	KVTQDMIC(UniMod:4)AGEKEGGK4	11003.2	18124.4	21302.8
Q62785	Q62785	HAP28_RAT	Pdap1	28 kDa heat- and acid-stable phosphoprotein	1	KVTQLDLDGPK	KVTQLDLDGPK	2	KVTQLDLDGPK2	12783	19577.9	16157.9
Q62785	Q62785	HAP28_RAT	Pdap1	28 kDa heat- and acid-stable phosphoprotein	1	KVTQLDLDGPK	KVTQLDLDGPK	3	KVTQLDLDGPK3	40253.3	40846.3	45302.6
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	KVTQTLQPTLYQIR	KVTQTLQPTLYQIR	3	KVTQTLQPTLYQIR3	9596.7	13112.6	10879.3
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	KVTTTVHNIIVGK	KVTTTVHNIIVGK	3	KVTTTVHNIIVGK3	3890.89	7313.12	7245.23
P15684	P15684	AMPN_RAT	Anpep	Aminopeptidase N	1	KVVATTQMQAADAR	KVVATTQMQAADAR	3	KVVATTQMQAADAR3			3431.36
Q1HAQ0	Q1HAQ0	PCAT1_RAT	Lpcat1	Lysophosphatidylcholine acyltransferase 1	1	KVVDFLLK	KVVDFLLK	2	KVVDFLLK2	3130.19		
P10536	P10536	RAB1B_RAT	Rab1b	Ras-related protein Rab-1B	1	KVVDNTTAK	KVVDNTTAK	1	KVVDNTTAK1			932.995
Q6NYB7	Q6NYB7	RAB1A_RAT	Rab1A	Ras-related protein Rab-1A	1	KVVDYTTAK	KVVDYTTAK	2	KVVDYTTAK2	341637	363542	295888
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	KVVEHGLFVK	KVVEHGLFVK	3	KVVEHGLFVK3	2730.11	7715.76	
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	KVVEQGMFVK	KVVEQGMFVK	2	KVVEQGMFVK2	5507.57	14978.4	3500.67
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	KVVEQGMFVK	KVVEQGMFVK	3	KVVEQGMFVK3	27298.2	28569.4	35789.1
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	KVVFAPTSIFTDDFVIPDISEPGTWK	KVVFAPTSIFTDDFVIPDISEPGTWK	3	KVVFAPTSIFTDDFVIPDISEPGTWK3	29570.8	39939.1	29581.5
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	KVVFAPTSIFTDDFVIPDISEPGTWK	KVVFAPTSIFTDDFVIPDISEPGTWK	4	KVVFAPTSIFTDDFVIPDISEPGTWK4	9236.74		5895.16
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	KVVGDVAYDEAK	KVVGDVAYDEAK	3	KVVGDVAYDEAK3	8198.25	7170.23	3928.04
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	KVVGDVAYDEAKEK	KVVGDVAYDEAKEK	3	KVVGDVAYDEAKEK3	4691.8	3920.88	2777.8
D4A7F6	D4A7F6	D4A7F6_RAT	Colec10	Collectin subfamily member 10	1	KVVGQLDISVAR	KVVGQLDISVAR	3	KVVGQLDISVAR3	50515.5	56047.6	45752.5
Q63965	Q63965	SFXN1_RAT	Sfxn1	Sideroflexin-1	1	KVVHDYR	KVVHDYR	2	KVVHDYR2			35751.3
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	KVVHLDVR	KVVHLDVR	2	KVVHLDVR2	3096.61	2515.44	3244.12
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	KVVITVQQLSNK	KVVITVQQLSNK	3	KVVITVQQLSNK3	4692.48	7661.26	10987.4
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	KVVNGQVFTLDDEPCTR	KVVNGQVFTLDDEPC(UniMod:4)TR	3	KVVNGQVFTLDDEPC(UniMod:4)TR3		3562.32	
Q9WTQ2	Q9WTQ2	PODXL_RAT	Podxl	Podocalyxin	1	KVVNLNGELGDSWIVPLDNLTK	KVVNLNGELGDSWIVPLDNLTK	3	KVVNLNGELGDSWIVPLDNLTK3	23884.8	17548.6	32835.4
D3ZGW2	D3ZGW2	D3ZGW2_RAT	Ap1g2	AP-1 complex subunit gamma	1	KVVPQLVQILR	KVVPQLVQILR	3	KVVPQLVQILR3	1413.75		2184.77
P63219	A0A8L2QRU2;P63219;F2Z3T8	GBG5_RAT	Gng5	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5	0	KVVQQLR	KVVQQLR	2	KVVQQLR2	30681	24215.5	33254
Q5M7U6	A0A8I6GGR3;Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	0	KVVVCDNGTGFVK	KVVVC(UniMod:4)DNGTGFVK	2	KVVVC(UniMod:4)DNGTGFVK2	9534.58	10103.6	9074.74
Q5M7U6	A0A8I6GGR3;Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	0	KVVVCDNGTGFVK	KVVVC(UniMod:4)DNGTGFVK	3	KVVVC(UniMod:4)DNGTGFVK3	56578.8	60606.4	90669.7
Q68FX1	Q68FX1	MPI_RAT	Mpi	Mannose-6-phosphate isomerase	1	KVVVEQLNLLVK	KVVVEQLNLLVK	3	KVVVEQLNLLVK3	1427.13	1944.47	
P84100	P84100	RL19_RAT	Rpl19	Large ribosomal subunit protein eL19	1	KVWLDPNETNEIANANSR	KVWLDPNETNEIANANSR	3	KVWLDPNETNEIANANSR3	2988.21	5255.93	5385.76
Q3B7D0	Q3B7D0	HEM6_RAT	Cpox	Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial	1	KWCDDYFFIAHR	KWC(UniMod:4)DDYFFIAHR	3	KWC(UniMod:4)DDYFFIAHR3	6625.85	3073.03	3950.8
D4AD37	D4AD37	IMPA3_RAT	Bpnt2	Golgi-resident adenosine 3',5'-bisphosphate 3'-phosphatase	1	KWDICAGNAILK	KWDIC(UniMod:4)AGNAILK	3	KWDIC(UniMod:4)AGNAILK3	8650.83	9660.21	8690.02
P68182	P68182	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	1	KWENPPPSNAGLEDFER	KWENPPPSNAGLEDFER	3	KWENPPPSNAGLEDFER3	32034.5	25653.5	17360.4
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	KWIADLPSMQLNR	KWIADLPSMQLNR	3	KWIADLPSMQLNR3	4616.34	3502.22	
Q02253	Q02253	MMSA_RAT	Aldh6a1	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial	1	KWLPELVER	KWLPELVER	2	KWLPELVER2		11571.5	8239.94
Q02253	Q02253	MMSA_RAT	Aldh6a1	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial	1	KWLPELVER	KWLPELVER	3	KWLPELVER3	7152.66	6745.75	12082.1
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	KWLSDELAGNADSWR	KWLSDELAGNADSWR	3	KWLSDELAGNADSWR3		1172.34	
Q6P7C7	Q6P7C7	GPNMB_RAT	Gpnmb	Transmembrane glycoprotein NMB	1	KWNFVYVFHTLGQYFQK	KWNFVYVFHTLGQYFQK	4	KWNFVYVFHTLGQYFQK4	4004.29		
Q0PMD2	Q0PMD2;A0A8I6A282	ANTR1_RAT	Antxr1	Anthrax toxin receptor 1	0	KWPTVDASYYGGR	KWPTVDASYYGGR	2	KWPTVDASYYGGR2	19178.9	24410.4	20879.6
Q0PMD2	Q0PMD2;A0A8I6A282	ANTR1_RAT	Antxr1	Anthrax toxin receptor 1	0	KWPTVDASYYGGR	KWPTVDASYYGGR	3	KWPTVDASYYGGR3	32549.3	61446.4	32886
Q64537	Q64537	CPNS1_RAT	Capns1	Calpain small subunit 1	1	KWQGIYK	KWQGIYK	1	KWQGIYK1	3021.99	1410.84	3767.12
Q64537	Q64537	CPNS1_RAT	Capns1	Calpain small subunit 1	1	KWQGIYK	KWQGIYK	2	KWQGIYK2	104485	126261	108763
A0A8I6GM04	A0A0G2K988;A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	0	KWQIYCSK	KWQIYC(UniMod:4)SK	2	KWQIYC(UniMod:4)SK2	9186.53	14088.5	12792.6
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	KWRPIASDDIVPGDIVSIGR	KWRPIASDDIVPGDIVSIGR	4	KWRPIASDDIVPGDIVSIGR4		3099.91	4711.87
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	KWTELDTNQHR	KWTELDTNQHR	3	KWTELDTNQHR3	4348.61	7691.29	5460.66
P14630	P14630	APOM_RAT	Apom	Apolipoprotein M	1	KWTYHLTEGK	KWTYHLTEGK	2	KWTYHLTEGK2	43264.4	44847.7	36775.8
P14630	P14630	APOM_RAT	Apom	Apolipoprotein M	1	KWTYHLTEGK	KWTYHLTEGK	3	KWTYHLTEGK3	927896	1.00408e+06	1.05959e+06
P08661	P08661;Q7TMC0	MBL2_RAT	Mbl2	Mannose-binding protein C	0	KWVLLSMSENVGK	KWVLLSMSENVGK	3	KWVLLSMSENVGK3	1940.76		
Q9Z2G8	Q9Z2G8	NP1L1_RAT	Nap1l1	Nucleosome assembly protein 1-like 1	1	KYAVLYQPLFDK	KYAVLYQPLFDK	3	KYAVLYQPLFDK3	3287.25	6718.83	
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	KYCADHFADGR	KYC(UniMod:4)ADHFADGR	3	KYC(UniMod:4)ADHFADGR3	5859.96	9515.19	10165.4
A0A8I6A6W3	A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	1	KYCEHDFQMLFAPCCHQCGEFIIGR	KYC(UniMod:4)EHDFQMLFAPC(UniMod:4)C(UniMod:4)HQC(UniMod:4)GEFIIGR	4	KYC(UniMod:4)EHDFQMLFAPC(UniMod:4)C(UniMod:4)HQC(UniMod:4)GEFIIGR4	33023.2	41175.6	23852
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	KYCGLPGEYWLGNDK	KYC(UniMod:4)GLPGEYWLGNDK	2	KYC(UniMod:4)GLPGEYWLGNDK2	553617	606292	595947
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	KYCGLPGEYWLGNDK	KYC(UniMod:4)GLPGEYWLGNDK	3	KYC(UniMod:4)GLPGEYWLGNDK3	7.50627e+06	7.42938e+06	7.48284e+06
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	KYCGLPGEYWLGNDKISQLTR	KYC(UniMod:4)GLPGEYWLGNDKISQLTR	3	KYC(UniMod:4)GLPGEYWLGNDKISQLTR3	3078.87	6461.58	
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	KYCGLPGEYWLGNDKISQLTR	KYC(UniMod:4)GLPGEYWLGNDKISQLTR	4	KYC(UniMod:4)GLPGEYWLGNDKISQLTR4	7452.16	15840.7	15828.9
P62907	A0A8I6A8X9;P62907;A0A8I5ZRE5	RL10A_RAT	Rpl10a	Large ribosomal subunit protein uL1	0	KYDAFLASESLIK	KYDAFLASESLIK	3	KYDAFLASESLIK3	34090.3	24866.9	27469
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	KYDASLK	KYDASLK	2	KYDASLK2		7207.01	
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	KYDDVTEK	KYDDVTEK	2	KYDDVTEK2	43891		21211.7
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	KYDEVLHMVR	KYDEVLHMVR	3	KYDEVLHMVR3	50687.1	36471.1	53437.2
Q64232	Q64232	TECR_RAT	Tecr	Very-long-chain enoyl-CoA reductase	1	KYDFTSSR	KYDFTSSR	2	KYDFTSSR2	18454.5	13136.2	24053.4
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	KYDGLFLSNGPGDPASYPGVVSTLNR	KYDGLFLSNGPGDPASYPGVVSTLNR	3	KYDGLFLSNGPGDPASYPGVVSTLNR3	8264.12	6008.71	
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	KYDYDPSFAIR	KYDYDPSFAIR	3	KYDYDPSFAIR3	7109.03	3703.09	12910.7
P02770	P02770	ALBU_RAT	Alb	Albumin	1	KYEATLEK	KYEATLEK	2	KYEATLEK2	7.49709e+06	7.48248e+06	7.57729e+06
Q6IG02	Q6IG02	K22E_RAT	Krt2	Keratin, type II cytoskeletal 2 epidermal	1	KYEDEINK	KYEDEINK	2	KYEDEINK2	78583.3	75569.3	59602.2
Q6IG02	Q6IG02	K22E_RAT	Krt2	Keratin, type II cytoskeletal 2 epidermal	1	KYEDEINKR	KYEDEINKR	2	KYEDEINKR2	23380.7		12775.3
Q6IG02	Q6IG02	K22E_RAT	Krt2	Keratin, type II cytoskeletal 2 epidermal	1	KYEDEINKR	KYEDEINKR	3	KYEDEINKR3	83005.6		58054.3
Q3T1J1	Q3T1J1;G3V7J7	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	0	KYEDICPSTHNMDVPNIK	KYEDIC(UniMod:4)PSTHNMDVPNIK	3	KYEDIC(UniMod:4)PSTHNMDVPNIK3	374886	376781	319066
Q3T1J1	Q3T1J1;G3V7J7	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	0	KYEDICPSTHNMDVPNIK	KYEDIC(UniMod:4)PSTHNMDVPNIK	4	KYEDIC(UniMod:4)PSTHNMDVPNIK4	500569	584891	471652
Q3T1J1	Q3T1J1;G3V7J7	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	0	KYEDICPSTHNMDVPNIKR	KYEDIC(UniMod:4)PSTHNMDVPNIKR	4	KYEDIC(UniMod:4)PSTHNMDVPNIKR4	25498.3	37167.1	24782.6
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	KYEEIDNAPEER	KYEEIDNAPEER	3	KYEEIDNAPEER3	5467.15		4633.18
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	KYEETREEVLEMR	KYEETREEVLEMR	3	KYEETREEVLEMR3	31996.6	43985.5	55036.7
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	KYEETREEVLEMR	KYEETREEVLEMR	4	KYEETREEVLEMR4	62776.2	35316.4	33317.8
Q63610	Q63610;P58775;P09495;P04692;A0A8I5YC74	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	0	KYEEVAR	KYEEVAR	2	KYEEVAR2			200110
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	KYEFGESDLR	KYEFGESDLR	2	KYEFGESDLR2	18948.2	21941.4	18838.5
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	KYEFGESDLR	KYEFGESDLR	3	KYEFGESDLR3	71244.5	84873.8	75213.5
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	KYEMFAQTLQQSR	KYEMFAQTLQQSR	2	KYEMFAQTLQQSR2	8057.22	6698.86	2152.57
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	KYEMFAQTLQQSR	KYEMFAQTLQQSR	3	KYEMFAQTLQQSR3	68186.1	75294.7	99554.8
Q9JHU5	Q9JHU5	ARFP1_RAT	Arfip1	Arfaptin-1	1	KYENILK	KYENILK	2	KYENILK2	3250.68		4364.88
F7ESI5	F7ESI5	F7ESI5_RAT	Cfhr1	Complement factor H-related 1	1	KYEPFSPVPGGK	KYEPFSPVPGGK	2	KYEPFSPVPGGK2	13347.5	7926.25	5862.86
F7ESI5	F7ESI5	F7ESI5_RAT	Cfhr1	Complement factor H-related 1	1	KYEPFSPVPGGK	KYEPFSPVPGGK	3	KYEPFSPVPGGK3	21783.1	20087.5	21162.8
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	KYEPPVPTR	KYEPPVPTR	2	KYEPPVPTR2	39811	29203	42457
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	KYEQGFITDPVVLSPK	KYEQGFITDPVVLSPK	2	KYEQGFITDPVVLSPK2	1900.38	1665.94	3529.3
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	KYEQGFITDPVVLSPK	KYEQGFITDPVVLSPK	3	KYEQGFITDPVVLSPK3	26389.4	26805.3	27607.3
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	KYESAYGTQFTPCQLLR	KYESAYGTQFTPC(UniMod:4)QLLR	3	KYESAYGTQFTPC(UniMod:4)QLLR3	12232.3	19378.3	19156.4
D3ZAI6	D3ZAI6	D3ZAI6_RAT	Nt5dc3	5'-nucleotidase domain containing 3	1	KYEYDPNFAIR	KYEYDPNFAIR	3	KYEYDPNFAIR3	6928.81	5519.15	1460.96
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	KYFLPIIEMVPQFLENLTDEELK	KYFLPIIEMVPQFLENLTDEELK	3	KYFLPIIEMVPQFLENLTDEELK3		1640.82	
Q9JJW3	Q9JJW3;A0A8L2QV13	ATPMK_RAT	Atp5mk	ATP synthase membrane subunit K, mitochondrial	0	KYFNSYTLTGR	KYFNSYTLTGR	2	KYFNSYTLTGR2		7214.71	5676.56
Q9JJW3	Q9JJW3;A0A8L2QV13	ATPMK_RAT	Atp5mk	ATP synthase membrane subunit K, mitochondrial	0	KYFNSYTLTGR	KYFNSYTLTGR	3	KYFNSYTLTGR3	18667	19892.7	21507.5
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	KYFTCDEGHGIFVR	KYFTC(UniMod:4)DEGHGIFVR	3	KYFTC(UniMod:4)DEGHGIFVR3	3728.55	4042.83	1922.52
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	KYFTCDEGHGIFVR	KYFTC(UniMod:4)DEGHGIFVR	4	KYFTC(UniMod:4)DEGHGIFVR4	5481.99	13166.6	8043.51
P19511	P19511	AT5F1_RAT	Atp5pb	ATP synthase F(0) complex subunit B1, mitochondrial	1	KYGASIGEFIDK	KYGASIGEFIDK	3	KYGASIGEFIDK3	3613.57	6113.69	
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	KYGVQFILDALR	KYGVQFILDALR	3	KYGVQFILDALR3	6279.14	11823.6	14756
A0A8I6A9R8	A0A8I6A9R8	A0A8I6A9R8_RAT	Cope	Coatomer subunit epsilon	1	KYGVVLDEIKPSSAPELQAVR	KYGVVLDEIKPSSAPELQAVR	4	KYGVVLDEIKPSSAPELQAVR4	4078.15		1376.73
Q924S1	Q924S1	PLCD_RAT	Agpat4	1-acyl-sn-glycerol-3-phosphate acyltransferase delta	1	KYHADCYVR	KYHADC(UniMod:4)YVR	3	KYHADC(UniMod:4)YVR3	2631.48	3592.98	
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	KYHIDGAR	KYHIDGAR	2	KYHIDGAR2	10158.9		7474.26
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	KYHLGHASSELR	KYHLGHASSELR	3	KYHLGHASSELR3	31150.1	33413.1	22291.4
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	KYHLGHASSELRK	KYHLGHASSELRK	2	KYHLGHASSELRK2			2795.99
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	KYHLGHASSELRK	KYHLGHASSELRK	3	KYHLGHASSELRK3	25435.3		
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	KYHLGHASSELRK	KYHLGHASSELRK	4	KYHLGHASSELRK4			7486.33
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	KYIPAAR	KYIPAAR	2	KYIPAAR2	3701.33		
P62898	P10715;D4A5L9;P62898	CYC_RAT	Cycs	Cytochrome c, somatic	0	KYIPGTK	KYIPGTK	2	KYIPGTK2	206343	228277	215368
Q6AXN3	Q6AXN3	TMED5_RAT	Tmed5	Transmembrane emp24 domain-containing protein 5	1	KYITNTDVLEMK	KYITNTDVLEMK	3	KYITNTDVLEMK3	2744.17		
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	KYIVNVYQISEEGK	KYIVNVYQISEEGK	2	KYIVNVYQISEEGK2	83065.1	79513.5	71908.7
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	KYIVNVYQISEEGK	KYIVNVYQISEEGK	3	KYIVNVYQISEEGK3	702340	820253	812326
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	KYKPLFDYFIK	KYKPLFDYFIK	3	KYKPLFDYFIK3	8065.2	5392.74	8893.72
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	KYLDSTFTSR	KYLDSTFTSR	2	KYLDSTFTSR2	66449.1	70565.9	64687.2
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	KYLDSTFTSR	KYLDSTFTSR	3	KYLDSTFTSR3	218561	252046	244768
P08461	A0A8I6B5J2;P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	0	KYLEKPVTMLL	KYLEKPVTMLL	3	KYLEKPVTMLL3	4647.24	4196.5	
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	KYLEVVLNTLQQASQAQVDK	KYLEVVLNTLQQASQAQVDK	3	KYLEVVLNTLQQASQAQVDK3	13075.7	18429.1	8198.58
Q9QZN9	Q9QZN9	CNR2_RAT	Cnr2	Cannabinoid receptor 2	1	KYLQGLGSEGKEEAPK	KYLQGLGSEGKEEAPK	3	KYLQGLGSEGKEEAPK3	8186.62	9062.79	5034.48
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	KYLTASQLVPPDNQDTR	KYLTASQLVPPDNQDTR	3	KYLTASQLVPPDNQDTR3	7383.12		3864.71
Q63678	Q63678	ZA2G_RAT	Azgp1	Zinc-alpha-2-glycoprotein	1	KYLTYSR	KYLTYSR	2	KYLTYSR2	11904.3	4922.74	6727.64
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	KYMEENDQLK	KYMEENDQLK	2	KYMEENDQLK2	56653.6	65507.8	59183.9
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	KYMEENDQLK	KYMEENDQLK	3	KYMEENDQLK3	52915.6	67959.8	81149.1
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	KYMEENDQLKK	KYMEENDQLKK	2	KYMEENDQLKK2		8979.94	2702.58
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	KYMEENDQLKK	KYMEENDQLKK	3	KYMEENDQLKK3		167238	169814
F1M4U9	F1M4U9	F1M4U9_RAT	Baz1a	Bromodomain adjacent to zinc finger domain, 1A	1	KYMEYLK	KYMEYLK	2	KYMEYLK2	103215	94452.8	71923.4
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	KYMLPEASILVTTRPSAIGR	KYMLPEASILVTTRPSAIGR	3	KYMLPEASILVTTRPSAIGR3	32831.6	24556.2	8023.96
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	KYMLPEASILVTTRPSAIGR	KYMLPEASILVTTRPSAIGR	4	KYMLPEASILVTTRPSAIGR4	76933.4	81233.9	79015.7
P39052	P39052;Q08877	DYN2_RAT	Dnm2	Dynamin-2	0	KYMLPLDNLK	KYMLPLDNLK	2	KYMLPLDNLK2	13253.7	8033.31	11695.8
P39052	P39052;Q08877	DYN2_RAT	Dnm2	Dynamin-2	0	KYMLPLDNLK	KYMLPLDNLK	3	KYMLPLDNLK3	13308.3	11555.5	12498.6
A0A0G2KA54	P08932;A0A0G2KA54	A0A0G2KA54_RAT	Kng1	Kininogen 1	0	KYNAELESGNQFLLYR	KYNAELESGNQFLLYR	3	KYNAELESGNQFLLYR3	61547.4	72500.2	72204
P01048	P01048	KNT1_RAT	Map1	T-kininogen 1	1	KYNAELESGNQFVLYR	KYNAELESGNQFVLYR	3	KYNAELESGNQFVLYR3	60701.1	43973.2	44179.5
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	KYNAGLK	KYNAGLK	1	KYNAGLK1	46254.1		117504
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	KYNAGLK	KYNAGLK	2	KYNAGLK2	29854.9		3.92007e+06
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	KYNALVMSAFNNDAGFVAALDK	KYNALVMSAFNNDAGFVAALDK	3	KYNALVMSAFNNDAGFVAALDK3	3607.01	10957.4	10709.9
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	KYNFQYELVQYK	KYNFQYELVQYK	2	KYNFQYELVQYK2	4737.94	2454.5	7268.65
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	KYNFQYELVQYK	KYNFQYELVQYK	3	KYNFQYELVQYK3	58182.7	68661.6	61419.7
Q78P75	P63170;Q78P75	DYL2_RAT	Dynll2	Dynein light chain 2, cytoplasmic	0	KYNPTWHCIVGR	KYNPTWHC(UniMod:4)IVGR	2	KYNPTWHC(UniMod:4)IVGR2	5374.19	10240.2	6026.97
Q78P75	P63170;Q78P75	DYL2_RAT	Dynll2	Dynein light chain 2, cytoplasmic	0	KYNPTWHCIVGR	KYNPTWHC(UniMod:4)IVGR	3	KYNPTWHC(UniMod:4)IVGR3	278404	335086	332038
Q78P75	P63170;Q78P75	DYL2_RAT	Dynll2	Dynein light chain 2, cytoplasmic	0	KYNPTWHCIVGR	KYNPTWHC(UniMod:4)IVGR	4	KYNPTWHC(UniMod:4)IVGR4	108677	163649	157547
A0A8I5ZKD4	A0A8I5ZKD4	A0A8I5ZKD4_RAT	Nhlrc3	NHL repeat containing 3	1	KYNSLGDLVQVLGTPGK	KYNSLGDLVQVLGTPGK	3	KYNSLGDLVQVLGTPGK3	5176.17	8666.46	11404
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	KYPDYESK	KYPDYESK	2	KYPDYESK2	307420	415702	357214
D4A4T0	D4A4T0	D4A4T0_RAT	Stub1	STIP1 homology and U-box containing protein 1	1	KYPEAAACYGR	KYPEAAAC(UniMod:4)YGR	2	KYPEAAAC(UniMod:4)YGR2	6681.38	5420.03	6874.99
D4A4T0	D4A4T0	D4A4T0_RAT	Stub1	STIP1 homology and U-box containing protein 1	1	KYPEAAACYGR	KYPEAAAC(UniMod:4)YGR	3	KYPEAAAC(UniMod:4)YGR3	27541.7	28089.9	26359.1
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	KYPEGNSSWQIK	KYPEGNSSWQIK	2	KYPEGNSSWQIK2	15129.5	24139.5	23026.8
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	KYPEGNSSWQIK	KYPEGNSSWQIK	3	KYPEGNSSWQIK3	27413.7	29367.6	31232.4
G3V9L1	G3V9L1	G3V9L1_RAT	Tex2	Testis expressed 2	1	KYPICIELGR	KYPIC(UniMod:4)IELGR	3	KYPIC(UniMod:4)IELGR3	8151.97	9126.76	3675.35
Q62656	Q62656	PTPRZ_RAT	Ptprz1	Receptor-type tyrosine-protein phosphatase zeta	1	KYPICNSPK	KYPIC(UniMod:4)NSPK	2	KYPIC(UniMod:4)NSPK2	35542.5	20468.1	32348.3
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	KYPLALFNDQTLK	KYPLALFNDQTLK	2	KYPLALFNDQTLK2	1.38219e+06	1.07454e+06	901435
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	KYPLALFNDQTLK	KYPLALFNDQTLK	3	KYPLALFNDQTLK3	5.28627e+06	5.18476e+06	4.87301e+06
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	KYPSLANR	KYPSLANR	2	KYPSLANR2	35916.5	21764.5	22398.5
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	KYPSMEAMLLYLASR	KYPSMEAMLLYLASR	3	KYPSMEAMLLYLASR3	35729.4	54619	48518.5
D3ZHQ1	D3ZHQ1	D3ZHQ1_RAT	Dpp8	Dipeptidylpeptidase 8	1	KYPTVLFIYGGPQVQLVNNR	KYPTVLFIYGGPQVQLVNNR	3	KYPTVLFIYGGPQVQLVNNR3	6988.02	10755.1	17020.2
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	KYPWIQLAGHAGSFK	KYPWIQLAGHAGSFK	4	KYPWIQLAGHAGSFK4	5740.56	7686.25	3583.36
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	KYPYVEVNSILGIDSAYDQNR	KYPYVEVNSILGIDSAYDQNR	3	KYPYVEVNSILGIDSAYDQNR3	10587.8	14256.2	8218.96
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	KYPYVEVNSILGIDSAYDQNRK	KYPYVEVNSILGIDSAYDQNRK	3	KYPYVEVNSILGIDSAYDQNRK3	20836.2	26132.7	17893.3
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	KYPYVEVNSILGIDSAYDQNRK	KYPYVEVNSILGIDSAYDQNRK	4	KYPYVEVNSILGIDSAYDQNRK4	87626.7	110285	100684
P31399	P31399	ATP5H_RAT	Atp5pd	ATP synthase subunit d, mitochondrial	1	KYPYWPHQPIENL	KYPYWPHQPIENL	2	KYPYWPHQPIENL2	42773.9	37252.6	46704.9
P31399	P31399	ATP5H_RAT	Atp5pd	ATP synthase subunit d, mitochondrial	1	KYPYWPHQPIENL	KYPYWPHQPIENL	3	KYPYWPHQPIENL3	142884	144809	170974
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	KYQEHEDVPICIHCSAGCGR	KYQEHEDVPIC(UniMod:4)IHC(UniMod:4)SAGC(UniMod:4)GR	3	KYQEHEDVPIC(UniMod:4)IHC(UniMod:4)SAGC(UniMod:4)GR3	831.484	2550.84	
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	KYQEHEDVPICIHCSAGCGR	KYQEHEDVPIC(UniMod:4)IHC(UniMod:4)SAGC(UniMod:4)GR	4	KYQEHEDVPIC(UniMod:4)IHC(UniMod:4)SAGC(UniMod:4)GR4	57905.5	58186.2	44935.3
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	KYQIFIPMVNK	KYQIFIPMVNK	3	KYQIFIPMVNK3	7407.7	3107.36	14513.4
B0BNM1	B0BNM1	NNRE_RAT	Naxe	NAD(P)H-hydrate epimerase	1	KYQLNLPAYPDTECVYR	KYQLNLPAYPDTEC(UniMod:4)VYR	3	KYQLNLPAYPDTEC(UniMod:4)VYR3	5483.56	7713.74	6627.23
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	KYSDPGPVYDCLVWHDGETWR	KYSDPGPVYDC(UniMod:4)LVWHDGETWR	4	KYSDPGPVYDC(UniMod:4)LVWHDGETWR4	9272.71	12160	12632.8
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	KYSDTDIEPFLK	KYSDTDIEPFLK	2	KYSDTDIEPFLK2	4086.79	4724.89	903.342
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	KYSDTDIEPFLK	KYSDTDIEPFLK	3	KYSDTDIEPFLK3	35196.3	30639.1	37195.3
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	KYSDVEVPASVTGHSFASDGDSGTCSPLR	KYSDVEVPASVTGHSFASDGDSGTC(UniMod:4)SPLR	4	KYSDVEVPASVTGHSFASDGDSGTC(UniMod:4)SPLR4	39069.2	35762.9	47765
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	KYSQFINFPIYVWSSK	KYSQFINFPIYVWSSK	3	KYSQFINFPIYVWSSK3	115642	118607	112147
F7F288	F7F288	F7F288_RAT	Bcap29	B-cell receptor-associated protein	1	KYSSINVVEK	KYSSINVVEK	3	KYSSINVVEK3	8591.41	6238.14	1248.96
Q63362	Q63362	NDUA5_RAT	Ndufa5	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5	1	KYTEQITSEK	KYTEQITSEK	2	KYTEQITSEK2	3572.18	4835.12	4700.58
Q63362	Q63362	NDUA5_RAT	Ndufa5	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5	1	KYTEQITSEK	KYTEQITSEK	3	KYTEQITSEK3	5219.86	4333.95	4967.33
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	KYTEYSFR	KYTEYSFR	2	KYTEYSFR2	8715.66	10837.1	13603.6
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	KYTGEDFDEDLR	KYTGEDFDEDLR	3	KYTGEDFDEDLR3	8545.75	9120.05	14705.5
P62828	P62828	RAN_RAT	Ran	GTP-binding nuclear protein Ran	1	KYVATLGVEVHPLVFHTNR	KYVATLGVEVHPLVFHTNR	4	KYVATLGVEVHPLVFHTNR4			8010.37
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	KYVDLTVSFAPDADGDEDLPGPPVR	KYVDLTVSFAPDADGDEDLPGPPVR	3	KYVDLTVSFAPDADGDEDLPGPPVR3	3494.77	7550.41	8678.06
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	KYVEEQAVK	KYVEEQAVK	2	KYVEEQAVK2	158600	150117	120797
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	KYVFFLDPCNLDLINR	KYVFFLDPC(UniMod:4)NLDLINR	3	KYVFFLDPC(UniMod:4)NLDLINR3	234284	256607	240966
B2RYF7	B2RYF7	WASH1_RAT	Washc1	WASH complex subunit 1	1	KYVFLDPLAGAVTK	KYVFLDPLAGAVTK	3	KYVFLDPLAGAVTK3	5868.56	10828.3	11766.1
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	KYVGFDSWDK	KYVGFDSWDK	3	KYVGFDSWDK3	20796	21382.7	25386.1
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	KYVIVSSK	KYVIVSSK	2	KYVIVSSK2	27881.8	28737.5	34488.8
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	KYVLPNFEVK	KYVLPNFEVK	2	KYVLPNFEVK2	14866.6	26159.6	13729.6
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	KYVLPNFEVK	KYVLPNFEVK	3	KYVLPNFEVK3	1.63864e+07	1.62875e+07	1.53908e+07
P80386	P80386;Q9QZH4	AAKB1_RAT	Prkab1	5'-AMP-activated protein kinase subunit beta-1	0	KYVTTLLYKPI	KYVTTLLYKPI	2	KYVTTLLYKPI2	5501.35	1796.01	3098.62
P80386	P80386;Q9QZH4	AAKB1_RAT	Prkab1	5'-AMP-activated protein kinase subunit beta-1	0	KYVTTLLYKPI	KYVTTLLYKPI	3	KYVTTLLYKPI3	14435.9	8467.25	7243.32
P70541	P70541	EI2BG_RAT	Eif2b3	Translation initiation factor eIF-2B subunit gamma	1	KYVVDFLMENK	KYVVDFLMENK	3	KYVVDFLMENK3	13760.7	8283.3	9210.73
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	KYVVGLIIK	KYVVGLIIK	2	KYVVGLIIK2	1784.38	5585.4	3630.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	KYVYSYEAESSSGVR	KYVYSYEAESSSGVR	2	KYVYSYEAESSSGVR2	35212.3	33252.1	38872.8
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	KYVYSYEAESSSGVR	KYVYSYEAESSSGVR	3	KYVYSYEAESSSGVR3	228095	278868	270977
Q6AXM8	Q6AXM8	PON2_RAT	Pon2	Serum paraoxonase/arylesterase 2	1	KYVYVADILAHEIHVLEK	KYVYVADILAHEIHVLEK	4	KYVYVADILAHEIHVLEK4	3714.68	9341.04	3596.03
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	KYYLGAVELPWDYVSGGASGAQR	KYYLGAVELPWDYVSGGASGAQR	3	KYYLGAVELPWDYVSGGASGAQR3	5958.47	6659.32	6436.25
E9PT20	E9PT20	E9PT20_RAT	Abl1	Tyrosine-protein kinase	1	LAAAEEESGLSSSK	LAAAEEESGLSSSK	2	LAAAEEESGLSSSK2		1563.73	
P50411	P50411	IPP2_RAT	Ppp1r2	Protein phosphatase inhibitor 2	1	LAAAEGSEPK	LAAAEGSEPK	2	LAAAEGSEPK2	83379.8	86280.8	81359.6
D3ZII8	D3ZII8	D3ZII8_RAT	Smyd5	Histone-lysine N-trimethyltransferase SMYD5	1	LAAAEQYHQILCPGPSQDDPR	LAAAEQYHQILC(UniMod:4)PGPSQDDPR	3	LAAAEQYHQILC(UniMod:4)PGPSQDDPR3	15831.6	21440.7	
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	LAAAFAVSR	LAAAFAVSR	2	LAAAFAVSR2	194673	170450	217554
O35757	O35757	VEGFC_RAT	Vegfc	Vascular endothelial growth factor C	1	LAAAHYNTEILK	LAAAHYNTEILK	3	LAAAHYNTEILK3	16410	16269.3	
D4A3V6	D4A3V6	D4A3V6_RAT	Bloc1s3	Biogenesis of lysosome-related organelles complex 1 subunit 3	1	LAAAQAIGLAAAHSVR	LAAAQAIGLAAAHSVR	3	LAAAQAIGLAAAHSVR3	20129.9	21837.5	10366.7
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	LAAAVAGPGGLTGLTLVDGR	LAAAVAGPGGLTGLTLVDGR	2	LAAAVAGPGGLTGLTLVDGR2	8813.4	7982.99	6643.78
Q505J9	Q505J9	ATAD1_RAT	Atad1	Outer mitochondrial transmembrane helix translocase	1	LAAAVFSLAIK	LAAAVFSLAIK	2	LAAAVFSLAIK2	5192.06	3021.84	
A0A8J8XL70	A0A8J8XL70	A0A8J8XL70_RAT	Serpinf1	Serpin family F member 1	1	LAAAVSNFGYDLYR	LAAAVSNFGYDLYR	2	LAAAVSNFGYDLYR2	118231	81840.5	88403.2
A0A8J8XL70	A0A8J8XL70	A0A8J8XL70_RAT	Serpinf1	Serpin family F member 1	1	LAAAVSNFGYDLYR	LAAAVSNFGYDLYR	3	LAAAVSNFGYDLYR3	2964.74	5975.91	2592.95
G3V784	G3V784	G3V784_RAT	Adpgk	ADP-dependent glucokinase	1	LAAAWDALIVQPAR	LAAAWDALIVQPAR	2	LAAAWDALIVQPAR2	22132.4	19833.4	26374.9
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	LAACESLAR	LAAC(UniMod:4)ESLAR	2	LAAC(UniMod:4)ESLAR2	231275	214415	206167
O88422	O88422	GALT5_RAT	Galnt5	Polypeptide N-acetylgalactosaminyltransferase 5	1	LAACNPTEPQQK	LAAC(UniMod:4)NPTEPQQK	2	LAAC(UniMod:4)NPTEPQQK2	5003.57	5662.1	7889.42
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	LAACVGFR	LAAC(UniMod:4)VGFR	2	LAAC(UniMod:4)VGFR2	36646.5	42068.8	37655.4
Q6AYE2	Q6AYE2	SHLB1_RAT	Sh3glb1	Endophilin-B1	1	LAADAGTFLSR	LAADAGTFLSR	2	LAADAGTFLSR2	103338	105428	114010
Q6AXY8	Q6AXY8	Q6AXY8_RAT	Dhrs1	Dehydrogenase/reductase 1	1	LAADCAHELR	LAADC(UniMod:4)AHELR	3	LAADC(UniMod:4)AHELR3	10783.2	12670.3	17900
Q6AXY8	Q6AXY8	Q6AXY8_RAT	Dhrs1	Dehydrogenase/reductase 1	1	LAADCAHELRR	LAADC(UniMod:4)AHELRR	3	LAADC(UniMod:4)AHELRR3	21719.6	9639.63	19801.3
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	LAADCMR	LAADC(UniMod:4)MR	2	LAADC(UniMod:4)MR2	60543.4	61893.1	65202.3
Q6IFU8	A0A8I6A244;Q6IFV1;Q6IFX1;A0A096MJE0;Q6IFV3;Q63279;Q6IFV4;Q6IFW6;Q6IFW0;Q6IFV5;Q6IFU7;Q6IFW2;Q6IFV6;F1MAF7;Q6IFU8;A0A8I6ACU5;Q5BJY9	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	0	LAADDFR	LAADDFR	2	LAADDFR2	2.16811e+06	2.2637e+06	1.74791e+06
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	LAADEEENADSNMK	LAADEEENADSNMK	2	LAADEEENADSNMK2	10777.5	13470.3	15697.7
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	LAADFAQMELAVGPLCR	LAADFAQMELAVGPLC(UniMod:4)R	2	LAADFAQMELAVGPLC(UniMod:4)R2	9215.59	14822.2	12548.7
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	LAADFAQMELAVGPLCR	LAADFAQMELAVGPLC(UniMod:4)R	3	LAADFAQMELAVGPLC(UniMod:4)R3	5263.46	5397.81	7762.5
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	LAADFQR	LAADFQR	2	LAADFQR2	140894	151479	132679
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	LAADFSVPLIIDIK	LAADFSVPLIIDIK	2	LAADFSVPLIIDIK2	5934.21	9286.7	5089.46
Q5M9G9	Q5M9G9	FAKD4_RAT	Tbrg4	FAST kinase domain-containing protein 4	1	LAADLLPFIPSMTPGEVAR	LAADLLPFIPSMTPGEVAR	3	LAADLLPFIPSMTPGEVAR3	2748.45	2998.75	3855.95
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	LAADLYNIK	LAADLYNIK	2	LAADLYNIK2	107147	124190	136588
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	LAADPDPNVK	LAADPDPNVK	2	LAADPDPNVK2	74906.8	78472.8	73900.3
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	LAADTVVSLGR	LAADTVVSLGR	2	LAADTVVSLGR2	269643	303254	290654
Q05962	A0A8I5Y643;A0A8I6A075;Q05962;Q09073	ADT1_RAT	Slc25a4	ADP/ATP translocase 1	0	LAADVGK	LAADVGK	1	LAADVGK1	59127.6	22791.2	34603.2
Q4KLN3	Q4KLN3	Q4KLN3_RAT	Srpk1	SRSF protein kinase 1	1	LAAEATEWQR	LAAEATEWQR	2	LAAEATEWQR2	10992.3	14608.8	10864.9
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	LAAEDNVGQPK	LAAEDNVGQPK	2	LAAEDNVGQPK2	20045.5	24286.7	23999.2
Q6MGB5	Q6MGB5	DHB8_RAT	Hsd17b8	(3R)-3-hydroxyacyl-CoA dehydrogenase	1	LAAEGAAVAACDLDGAAAQDTVR	LAAEGAAVAAC(UniMod:4)DLDGAAAQDTVR	3	LAAEGAAVAAC(UniMod:4)DLDGAAAQDTVR3	4206.22	2000.66	2079.44
Q9ERE6	Q9ERE6	MPRIP_RAT	Mprip	Myosin phosphatase Rho-interacting protein	1	LAAEITR	LAAEITR	2	LAAEITR2	11529.7	17406.5	12921.3
Q03343	Q04400;Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	0	LAAENHCLR	LAAENHC(UniMod:4)LR	2	LAAENHC(UniMod:4)LR2	8418.94	20310.9	18057.3
P30427	P30427	PLEC_RAT	Plec	Plectin	1	LAAEQELIR	LAAEQELIR	2	LAAEQELIR2	8759.72	6106.44	4328.19
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	LAAEVYK	LAAEVYK	2	LAAEVYK2	39048.5	52546.7	51857.4
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	LAAFAQELGGR	LAAFAQELGGR	2	LAAFAQELGGR2	39663.4	49220.3	46486.2
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	LAAFRPSAFTDTQYLQDTMNHVLSCVK	LAAFRPSAFTDTQYLQDTMNHVLSC(UniMod:4)VK	4	LAAFRPSAFTDTQYLQDTMNHVLSC(UniMod:4)VK4	3632.33	5063.85	
Q4G069	Q4G069	RMD1_RAT	Rmdn1	Regulator of microtubule dynamics protein 1	1	LAAFWLVK	LAAFWLVK	2	LAAFWLVK2	21951.7	13353.6	14076.9
D3ZFJ3	D3ZFJ3	3BP1_RAT	Sh3bp1	SH3 domain-binding protein 1	1	LAAGASVLK	LAAGASVLK	2	LAAGASVLK2		28104.4	21809.1
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	LAAGDNNSK	LAAGDNNSK	2	LAAGDNNSK2			15120.7
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	LAAGDQLLSVDGR	LAAGDQLLSVDGR	2	LAAGDQLLSVDGR2	23368.6	33338.3	25257.9
A0A8I5ZYB9	A0A8I5ZYB9	A0A8I5ZYB9_RAT	Lrrc32	Leucine rich repeat containing 32	1	LAAGMALNSGGLGR	LAAGMALNSGGLGR	2	LAAGMALNSGGLGR2	121699	111599	94519.3
A0A8I5ZKH1	A0A8I5ZKH1	A0A8I5ZKH1_RAT	Ythdc2	RNA helicase	1	LAAIAVAER	LAAIAVAER	2	LAAIAVAER2	3025.23	1435	
P28073	P28073;A0A0G2JSL0	PSB6_RAT	Psmb6	Proteasome subunit beta type-6	0	LAAIQQSGVER	LAAIQQSGVER	2	LAAIQQSGVER2	1.73033e+06	1.90523e+06	1.80858e+06
P30427	P30427	PLEC_RAT	Plec	Plectin	1	LAAISEATR	LAAISEATR	2	LAAISEATR2	3936.55	5737.3	4210.49
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LAALADQWQFLVQK	LAALADQWQFLVQK	2	LAALADQWQFLVQK2	89805	142539	99060.6
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LAALADQWQFLVQK	LAALADQWQFLVQK	3	LAALADQWQFLVQK3	12351.9	20009.4	12607.6
B0BNI5	B0BNI5	OLFL3_RAT	Olfml3	Olfactomedin-like protein 3	1	LAALEER	LAALEER	2	LAALEER2	112494	112325	113408
O35217	O35217	MINP1_RAT	Minpp1	Multiple inositol polyphosphate phosphatase 1	1	LAALFPDLFCR	LAALFPDLFC(UniMod:4)R	2	LAALFPDLFC(UniMod:4)R2	72082.2	119406	82621
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	LAALNGK	LAALNGK	1	LAALNGK1	8661.99	8880.89	7087.61
Q6MG61	Q6MG61	CLIC1_RAT	Clic1	Chloride intracellular channel protein 1	1	LAALNPESNTSGLDIFAK	LAALNPESNTSGLDIFAK	2	LAALNPESNTSGLDIFAK2	325214	260762	241303
Q6MG61	Q6MG61	CLIC1_RAT	Clic1	Chloride intracellular channel protein 1	1	LAALNPESNTSGLDIFAK	LAALNPESNTSGLDIFAK	3	LAALNPESNTSGLDIFAK3	32086.8	23521.9	33640.1
A0A0U1RRV5	A0A0U1RRV5	A0A0U1RRV5_RAT	Cluh	Clustered mitochondria protein homolog	1	LAALQLMQQK	LAALQLMQQK	2	LAALQLMQQK2	2032.56	1815.75	4392.62
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	LAALSIEESK	LAALSIEESK	2	LAALSIEESK2	55411.9	36665.7	44033.9
P32198	P32198	CPT1A_RAT	Cpt1a	Carnitine O-palmitoyltransferase 1, liver isoform	1	LAALTAADR	LAALTAADR	2	LAALTAADR2	74687	71295	68395
P32198	P32198	CPT1A_RAT	Cpt1a	Carnitine O-palmitoyltransferase 1, liver isoform	1	LAALTAADRVPWAK	LAALTAADRVPWAK	3	LAALTAADRVPWAK3	34083	46497.2	46827.3
A0A0G2K5L2	A0A0G2K5L2	GHC1_RAT	Slc25a22	Mitochondrial glutamate carrier 1	1	LAANDFFR	LAANDFFR	2	LAANDFFR2	34241.9	31222.5	29342.5
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	LAAQESSEAEDVTIDR	LAAQESSEAEDVTIDR	2	LAAQESSEAEDVTIDR2	1189.46	1671.79	2031.59
M0RBL7	M0RBL7	M0RBL7_RAT	Tcaf2c	Protein FAM115C-like	1	LAAQPFPFERPER	LAAQPFPFERPER	3	LAAQPFPFERPER3	51928	42471.2	43263
A0A8I6ABZ7	A0A8I6ABZ7	A0A8I6ABZ7_RAT	Dhx9	RNA helicase	1	LAAQSCALSLVR	LAAQSC(UniMod:4)ALSLVR	2	LAAQSC(UniMod:4)ALSLVR2	5462.34	3070.05	
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	LAAQSTLTFYQK	LAAQSTLTFYQK	2	LAAQSTLTFYQK2	12334.3	14792.5	9666.1
Q63486	Q63486;Q63487	RRAGA_RAT	Rraga	Ras-related GTP-binding protein A	0	LAASFQSMEVR	LAASFQSMEVR	2	LAASFQSMEVR2	28149	34138.3	19615.8
Q07266	Q07266	DREB_RAT	Dbn1	Drebrin	1	LAASGEGGLQELSGHFENQK	LAASGEGGLQELSGHFENQK	3	LAASGEGGLQELSGHFENQK3	6494.04	1919.74	10630.6
Q6P6S2	Q6P6S2	S39AB_RAT	Slc39a11	Zinc transporter ZIP11	1	LAATDFPEGAAPSGPVHGNSGQPGVSSWR	LAATDFPEGAAPSGPVHGNSGQPGVSSWR	3	LAATDFPEGAAPSGPVHGNSGQPGVSSWR3	5795.18		
O88277	O88277	FAT2_RAT	Fat2	Protocadherin Fat 2	1	LAATDPDTGFHGK	LAATDPDTGFHGK	3	LAATDPDTGFHGK3	3961.34	2951.27	15660.2
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	LAATNALLNSLEFTK	LAATNALLNSLEFTK	2	LAATNALLNSLEFTK2	184759	236977	215513
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	LAATNALLNSLEFTK	LAATNALLNSLEFTK	3	LAATNALLNSLEFTK3	26547.5	44152.8	42697.4
Q5M9G8	Q5M9G8	DCA11_RAT	Dcaf11	DDB1- and CUL4-associated factor 11	1	LAATQQNWDYR	LAATQQNWDYR	2	LAATQQNWDYR2	7953.81	6118.13	7876.7
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	LAATVATMR	LAATVATMR	2	LAATVATMR2	22988.5	21850.3	19509.5
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	LAAVAAINAAIQK	LAAVAAINAAIQK	2	LAAVAAINAAIQK2	24926.1	18449.8	11733.4
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	LAAVACVGAFYEK	LAAVAC(UniMod:4)VGAFYEK	2	LAAVAC(UniMod:4)VGAFYEK2	7676.98	7318.65	
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	LAAVDATVNQVLASR	LAAVDATVNQVLASR	2	LAAVDATVNQVLASR2	1.49749e+06	1.5024e+06	1.60073e+06
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	LAAVDATVNQVLASR	LAAVDATVNQVLASR	3	LAAVDATVNQVLASR3	662246	750746	793692
D3ZGA5	D3ZGA5	D3ZGA5_RAT	Rilp	Rab interacting lysosomal protein	1	LAAVQTQLR	LAAVQTQLR	2	LAAVQTQLR2	12663.4	15105.5	8796.56
Q9WVC0	Q9WVC0;A0A8I6ARI4	SEPT7_RAT	Septin7	Septin-7	0	LAAVTYNGVDNNK	LAAVTYNGVDNNK	2	LAAVTYNGVDNNK2	48032.9	31575.7	45262.6
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	LAAVVCLGSLYK	LAAVVC(UniMod:4)LGSLYK	2	LAAVVC(UniMod:4)LGSLYK2	41745.9	53588	32831.5
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	LAAYEVLVMLADSSPSNLQIITK	LAAYEVLVMLADSSPSNLQIITK	3	LAAYEVLVMLADSSPSNLQIITK3		5714.07	
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LAAYLLLMR	LAAYLLLMR	2	LAAYLLLMR2	1.23755e+06	1.43176e+06	1.14506e+06
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	LAAYPPPEFQWYK	LAAYPPPEFQWYK	2	LAAYPPPEFQWYK2	954370	977823	1.04309e+06
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	LAAYPPPEFQWYK	LAAYPPPEFQWYK	3	LAAYPPPEFQWYK3	29334.8	39981.8	38874.8
Q08420	Q08420	SODE_RAT	Sod3	Extracellular superoxide dismutase [Cu-Zn]	1	LACCVVGTSNSEAWESQTK	LAC(UniMod:4)C(UniMod:4)VVGTSNSEAWESQTK	3	LAC(UniMod:4)C(UniMod:4)VVGTSNSEAWESQTK3	8383.42	5939.06	9915.67
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	LACGGVLIHTSWVLTAAHCLESSK	LAC(UniMod:4)GGVLIHTSWVLTAAHC(UniMod:4)LESSK	3	LAC(UniMod:4)GGVLIHTSWVLTAAHC(UniMod:4)LESSK3	95766.9	85092.8	91292.8
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	LACGGVLIHTSWVLTAAHCLESSK	LAC(UniMod:4)GGVLIHTSWVLTAAHC(UniMod:4)LESSK	4	LAC(UniMod:4)GGVLIHTSWVLTAAHC(UniMod:4)LESSK4	470631	414184	419739
Q9JK72	Q9JK72	CCS_RAT	Ccs	Copper chaperone for superoxide dismutase	1	LACGIIAR	LAC(UniMod:4)GIIAR	2	LAC(UniMod:4)GIIAR2	61849.5	50981.8	61284.2
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	LACGLVK	LAC(UniMod:4)GLVK	2	LAC(UniMod:4)GLVK2	387393	411198	374377
Q5M872	Q5M872	DPEP2_RAT	Dpep2	Dipeptidase 2	1	LACLIGVEGGHSLDNSLAVLR	LAC(UniMod:4)LIGVEGGHSLDNSLAVLR	3	LAC(UniMod:4)LIGVEGGHSLDNSLAVLR3	18528.7	18367.8	11746.1
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	LACMEEFQK	LAC(UniMod:4)MEEFQK	2	LAC(UniMod:4)MEEFQK2	62577.2	43360.2	
D3ZHW0	D3ZHW0	D3ZHW0_RAT	Dhx29	ATP-dependent RNA helicase DHX29	1	LACMVETAQGK	LAC(UniMod:4)MVETAQGK	2	LAC(UniMod:4)MVETAQGK2	5028.98	4188.15	4398.19
P51111	P51111	HD_RAT	Htt	Huntingtin	1	LACTAVR	LAC(UniMod:4)TAVR	2	LAC(UniMod:4)TAVR2	45891.5	62043.9	46195.2
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	LACTHTGIQFYQFSVGNQR	LAC(UniMod:4)THTGIQFYQFSVGNQR	3	LAC(UniMod:4)THTGIQFYQFSVGNQR3	15094.9	16895.5	12018.6
D3ZQI6	D3ZQI6	D3ZQI6_RAT	Xpo4	Exportin 4	1	LADAFNK	LADAFNK	2	LADAFNK2	56250.1	54853.7	52958.8
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	LADALQELR	LADALQELR	2	LADALQELR2	67301.4	61352.8	72087.2
A0A8I6GK77	A0A8I6GK77	A0A8I6GK77_RAT	Bcas3	BCAS3, microtubule associated cell migration factor	1	LADAMAESPSR	LADAMAESPSR	2	LADAMAESPSR2	5608.33	7881.21	3711.09
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	LADDEDYKDVQNLK	LADDEDYKDVQNLK	3	LADDEDYKDVQNLK3	32465.6	24443.9	28270.2
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	LADDLYR	LADDLYR	2	LADDLYR2	141086	120701	127256
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	LADDSEPTVR	LADDSEPTVR	2	LADDSEPTVR2	80538.5	77722.4	80471.2
A2VCX1	A2VCX1	TIPRL_RAT	Tiprl	TIP41-like protein	1	LADELHMPSLPEMMFGDNVLR	LADELHMPSLPEMMFGDNVLR	3	LADELHMPSLPEMMFGDNVLR3	14774.2	14129	8706.02
F7ERH6	F7ERH6	F7ERH6_RAT	Atf6b	Activating transcription factor 6 beta	1	LADELSGWVQR	LADELSGWVQR	2	LADELSGWVQR2	9429.22	5956.3	7831.65
A0A8I6AS56	A0A8I6AS56	A0A8I6AS56_RAT	Abhd11	Abhydrolase domain containing 11	1	LADEQLSSVVK	LADEQLSSVVK	2	LADEQLSSVVK2	10801.4	12753.4	11204.4
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	LADEQYQLLSSAHAVEMFLR	LADEQYQLLSSAHAVEMFLR	3	LADEQYQLLSSAHAVEMFLR3	4360.6		8707.26
Q03114	O35832;M0R7D0;P35426;A0A8I6A7V5;F1MA87;Q3MJK5;Q63699;F1M1X9;Q03114;Q641Z4;O35831;P39951	CDK5_RAT	Cdk5	Cyclin-dependent kinase 5	0	LADFGLAR	LADFGLAR	2	LADFGLAR2	1.59507e+06	1.78997e+06	1.74012e+06
Q64617	Q64617;P09216	KPCL_RAT	Prkch	Protein kinase C eta type	0	LADFGMCK	LADFGMC(UniMod:4)K	2	LADFGMC(UniMod:4)K2	902410	799950	
Q7TT49	Q7TT49;O54874;A0A8I6ANX6	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	0	LADFGSCLK	LADFGSC(UniMod:4)LK	2	LADFGSC(UniMod:4)LK2	212294	217811	190680
Q62868	Q62868;Q63644	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	0	LADFGTCMK	LADFGTC(UniMod:4)MK	2	LADFGTC(UniMod:4)MK2	123589	152087	168530
O54748	O54748;A0A8I6A0F8	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	0	LADFGVAGQLTDTMAK	LADFGVAGQLTDTMAK	2	LADFGVAGQLTDTMAK2	114852	110563	116624
O54748	O54748;A0A8I6A0F8	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	0	LADFGVAGQLTDTMAK	LADFGVAGQLTDTMAK	3	LADFGVAGQLTDTMAK3	14010.7	11738.3	17392.4
B0LT89	Q6V9V9;B0LT89;A0A8I6GBQ0	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	0	LADFGVAGQLTDTQIK	LADFGVAGQLTDTQIK	2	LADFGVAGQLTDTQIK2	416239	388236	359820
B0LT89	Q6V9V9;B0LT89;A0A8I6GBQ0	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	0	LADFGVAGQLTDTQIK	LADFGVAGQLTDTQIK	3	LADFGVAGQLTDTQIK3	56130	63670.5	64002.7
B0LT89	Q6V9V9;B0LT89;A0A8I6GBQ0	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	0	LADFGVAGQLTDTQIKR	LADFGVAGQLTDTQIKR	2	LADFGVAGQLTDTQIKR2		1734.18	884.936
B0LT89	Q6V9V9;B0LT89;A0A8I6GBQ0	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	0	LADFGVAGQLTDTQIKR	LADFGVAGQLTDTQIKR	3	LADFGVAGQLTDTQIKR3	69494.6	98838.8	91733.4
Q5XHY5	Q5XHY5;Q68FW7	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	0	LADFGVLHR	LADFGVLHR	2	LADFGVLHR2	5303.63	4603.7	7269.88
O08815	E9PTG8;O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	0	LADFGVSAK	LADFGVSAK	2	LADFGVSAK2	195214	221910	213693
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	LADFNIYQVSTAEQCR	LADFNIYQVSTAEQC(UniMod:4)R	2	LADFNIYQVSTAEQC(UniMod:4)R2	15116.7	9357.72	9571.3
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	LADFNIYQVSTAEQCR	LADFNIYQVSTAEQC(UniMod:4)R	3	LADFNIYQVSTAEQC(UniMod:4)R3		9130.28	7414.6
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	LADGLQK	LADGLQK	1	LADGLQK1	50667.9	25689.2	31083.2
B3DMA2	B3DMA2	ACD11_RAT	Acad11	Acyl-CoA dehydrogenase family member 11	1	LADGPDEVHLSAIAK	LADGPDEVHLSAIAK	3	LADGPDEVHLSAIAK3	44012.7	31622.9	37690.7
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	LADGPHGCAGR	LADGPHGC(UniMod:4)AGR	2	LADGPHGC(UniMod:4)AGR2			17017.3
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	LADGPPAK	LADGPPAK	2	LADGPPAK2	27657.2	33161.2	33624.3
A0A8I6A2I6	A0A8I6A2I6	A0A8I6A2I6_RAT	Frrs1	Ferric-chelate reductase 1	1	LADGVIQCSFR	LADGVIQC(UniMod:4)SFR	2	LADGVIQC(UniMod:4)SFR2	3402.84	3476.11	
Q8R491	Q8R491	EHD3_RAT	Ehd3	EH domain-containing protein 3	1	LADIDKDGMLDDEEFALANHLIK	LADIDKDGMLDDEEFALANHLIK	3	LADIDKDGMLDDEEFALANHLIK3	23753.3	16977	20659.8
Q8R491	Q8R491	EHD3_RAT	Ehd3	EH domain-containing protein 3	1	LADIDKDGMLDDEEFALANHLIK	LADIDKDGMLDDEEFALANHLIK	4	LADIDKDGMLDDEEFALANHLIK4	110165	97433.3	97608.8
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	LADIIHHWNANR	LADIIHHWNANR	3	LADIIHHWNANR3	5839.4	9513.92	5997.17
Q62865	Q62865;Q63085	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	0	LADINGPAK	LADINGPAK	2	LADINGPAK2	880691	903920	897963
D3ZX38	D3ZX38	D3ZX38_RAT	Pfdn1	Prefoldin subunit 1	1	LADIQIEQLNR	LADIQIEQLNR	2	LADIQIEQLNR2	149504	132497	144463
D3ZM39	D3ZM39	D3ZM39_RAT	Dsg1	Desmoglein 1	1	LADISLGK	LADISLGK	2	LADISLGK2	47852.5	33836.5	24240.9
A0A8I5ZVU1	A0A8I5ZVU1	A0A8I5ZVU1_RAT	Uckl1	Uridine-cytidine kinase	1	LADIVVPR	LADIVVPR	2	LADIVVPR2	14484.7	28416.4	22080.2
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	LADLFGWAHLANTYISVR	LADLFGWAHLANTYISVR	3	LADLFGWAHLANTYISVR3	49082.6	34696.1	33883.1
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	LADLFGWSQLIYNHITTR	LADLFGWSQLIYNHITTR	3	LADLFGWSQLIYNHITTR3	82285.9	87692.1	107750
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	LADLIER	LADLIER	2	LADLIER2	254932	233599	259269
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	LADLPGNYITK	LADLPGNYITK	2	LADLPGNYITK2	61021.1	46981.1	49515
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	LADLPGNYITK	LADLPGNYITK	3	LADLPGNYITK3		1694	
P70567	P70567	TMOD1_RAT	Tmod1	Tropomodulin-1	1	LADLTGPIIPK	LADLTGPIIPK	2	LADLTGPIIPK2	10563.1	15051.4	11357.1
P15651	P15651	ACADS_RAT	Acads	Short-chain specific acyl-CoA dehydrogenase, mitochondrial	1	LADMALALESAR	LADMALALESAR	2	LADMALALESAR2	15095.8	77287.4	87257.2
P15651	P15651	ACADS_RAT	Acads	Short-chain specific acyl-CoA dehydrogenase, mitochondrial	1	LADMALALESAR	LADMALALESAR	3	LADMALALESAR3		2983.95	2126.37
Q6AYT3	Q6AYT3	RTCB_RAT	Rtcb	RNA-splicing ligase RtcB homolog	1	LADMGIAIR	LADMGIAIR	2	LADMGIAIR2	14554.8	17108.2	12843.4
Q923U9	Q923U9	S40A1_RAT	Slc40a1	Solute carrier family 40 member 1	1	LADMNATIR	LADMNATIR	2	LADMNATIR2	142892	127233	146598
Q6QBQ4	Q6QBQ4	PLS3_RAT	Plscr3	Phospholipid scramblase 3	1	LADPGDREVLR	LADPGDREVLR	3	LADPGDREVLR3	54010.9	53080.6	55425.5
F1M171	F1M171	F1M171_RAT	Leg1	Similar to RIKEN cDNA 2310057J18	1	LADPTGMTDCGK	LADPTGMTDC(UniMod:4)GK	2	LADPTGMTDC(UniMod:4)GK2	441265	424789	454014
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	LADQALR	LADQALR	1	LADQALR1	37751.8	39495.7	33696.8
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	LADQALR	LADQALR	2	LADQALR2	1.47731e+07	1.6345e+07	1.74819e+07
D3ZW58	D3ZW58	D3ZW58_RAT	Golm2	Golgi membrane protein 2	1	LADQFLQEQK	LADQFLQEQK	2	LADQFLQEQK2	3587.96	4597.5	5887.71
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	LADQIFAYYK	LADQIFAYYK	2	LADQIFAYYK2	80340.3	97167.8	94498.3
A0A8I6AJ06	A0A8I6AJ06	A0A8I6AJ06_RAT	Ubl7	Ubiquitin-like 7	1	LADQPLAPK	LADQPLAPK	2	LADQPLAPK2	15797.4	13162.7	8385.67
A0A0G2JVT8	A0A8I6ARY9;A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	0	LADSISLK	LADSISLK	2	LADSISLK2	25055.8	24696.5	20593.7
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	LADTLQQCFMNTK	LADTLQQC(UniMod:4)FMNTK	2	LADTLQQC(UniMod:4)FMNTK2	41710	51210.1	47552.1
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	LADTLQQCFMNTK	LADTLQQC(UniMod:4)FMNTK	3	LADTLQQC(UniMod:4)FMNTK3	11259.6	10555.5	7145.86
Q641Z6	Q641Z6	EHD1_RAT	Ehd1	EH domain-containing protein 1	1	LADVDKDGLLDDEEFALANHLIK	LADVDKDGLLDDEEFALANHLIK	4	LADVDKDGLLDDEEFALANHLIK4	18194	12860	14598.7
Q9JKC9	Q9JKC9	SYNRG_RAT	Synrg	Synergin gamma	1	LADVGGDLK	LADVGGDLK	2	LADVGGDLK2	15687.1	17906	11601.7
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	LADYFVLVAFGPHPR	LADYFVLVAFGPHPR	3	LADYFVLVAFGPHPR3	29516.2	26470.6	22701.6
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LADYQSQLEK	LADYQSQLEK	2	LADYQSQLEK2	249128	252699	250370
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	LADYVVPGCQTVLSPTASEPDTTLTK	LADYVVPGC(UniMod:4)QTVLSPTASEPDTTLTK	3	LADYVVPGC(UniMod:4)QTVLSPTASEPDTTLTK3	3945.58	4874.83	3182.18
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	LAEAEDDFKK	LAEAEDDFKK	2	LAEAEDDFKK2	31847.5	22723.1	16519.1
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	LAEAEDDFKK	LAEAEDDFKK	3	LAEAEDDFKK3	162290	141107	151792
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	LAEAEEADK	LAEAEEADK	2	LAEAEEADK2	79736.7	101587	100165
Q811U3	Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	1	LAEAEMHVHHLESLLEQK	LAEAEMHVHHLESLLEQK	3	LAEAEMHVHHLESLLEQK3	4483.68	3620.95	
Q2V057	Q2V057	HYPDH_RAT	Prodh2	Hydroxyproline dehydrogenase	1	LAEAMESGR	LAEAMESGR	2	LAEAMESGR2	4560.2	2247.41	2381.42
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	LAEAYEQIEK	LAEAYEQIEK	2	LAEAYEQIEK2	78789.5	84683.2	69052.1
Q4QQV2	Q4QQV2	DOK1_RAT	Dok1	Docking protein 1	1	LAECVSVVPVTVESPPEPGASAFR	LAEC(UniMod:4)VSVVPVTVESPPEPGASAFR	3	LAEC(UniMod:4)VSVVPVTVESPPEPGASAFR3	60066.1	44264.6	60309.1
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	LAEDAPNFDGPAAEGQPGQK	LAEDAPNFDGPAAEGQPGQK	3	LAEDAPNFDGPAAEGQPGQK3	13909.4	23062.1	24042.3
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	LAEDDKDGVMAHK	LAEDDKDGVMAHK	2	LAEDDKDGVMAHK2	1684.57	1004.76	
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	LAEDDKDGVMAHK	LAEDDKDGVMAHK	3	LAEDDKDGVMAHK3	92838.1	77953.7	35479.5
Q8VID1	Q8VID1	DHRS4_RAT	Dhrs4	Dehydrogenase/reductase SDR family member 4	1	LAEDGAHVVISSR	LAEDGAHVVISSR	3	LAEDGAHVVISSR3	31236.3	23779.4	52895.4
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	LAEDILNTMFDPSYSK	LAEDILNTMFDPSYSK	2	LAEDILNTMFDPSYSK2	109134	116395	108647
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	LAEDILNTMFDPSYSK	LAEDILNTMFDPSYSK	3	LAEDILNTMFDPSYSK3	39492.3	67796.8	59842.1
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	LAEDVQR	LAEDVQR	2	LAEDVQR2	513898	483363	515051
P23377	P23377	FURIN_RAT	Furin	Furin	1	LAEEAFFR	LAEEAFFR	2	LAEEAFFR2	30026.7	30316.3	29754.3
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	LAEEEFGHFYTQDCYVFLCR	LAEEEFGHFYTQDC(UniMod:4)YVFLC(UniMod:4)R	3	LAEEEFGHFYTQDC(UniMod:4)YVFLC(UniMod:4)R3	69509.2	62233.7	48101.4
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	LAEEESCR	LAEEESC(UniMod:4)R	2	LAEEESC(UniMod:4)R2	3022.34		
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	LAEEESCREDVTR	LAEEESC(UniMod:4)REDVTR	2	LAEEESC(UniMod:4)REDVTR2	1558.34	975.179	
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	LAEEESCREDVTR	LAEEESC(UniMod:4)REDVTR	3	LAEEESC(UniMod:4)REDVTR3	18592	27641.1	30790.1
Q68HB8	Q68HB8	Q68HB8_RAT	Pcdh7	Protocadherin 7	1	LAEEGPADVR	LAEEGPADVR	2	LAEEGPADVR2	20689.1	22111.6	17786.9
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	LAEEHGS	LAEEHGS	1	LAEEHGS1			37604.9
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	LAEEKDELLSQIR	LAEEKDELLSQIR	2	LAEEKDELLSQIR2	2974.78	2571.34	3200.8
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	LAEEKDELLSQIR	LAEEKDELLSQIR	3	LAEEKDELLSQIR3	215543	203131	197327
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	LAEEKDELLSQIRK	LAEEKDELLSQIRK	3	LAEEKDELLSQIRK3	5008.56	12246.6	15226.4
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	LAEEKDELLSQIRK	LAEEKDELLSQIRK	4	LAEEKDELLSQIRK4	8919.2	17049.5	17461.2
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	LAEELDTR	LAEELDTR	2	LAEELDTR2	211218	265774	224304
Q9EST6	Q9EST6	AN32B_RAT	Anp32b	Acidic leucine-rich nuclear phosphoprotein 32 family member B	1	LAEELPSLTHLNLSGNNLK	LAEELPSLTHLNLSGNNLK	3	LAEELPSLTHLNLSGNNLK3	16001.6	52643.2	16786
A0A8I6A1D9	A0A8I6A1D9	A0A8I6A1D9_RAT	Use1	Vesicle transport protein USE1	1	LAEEMLGLAR	LAEEMLGLAR	2	LAEEMLGLAR2	14079.1	16044.9	11128.9
Q4V8A2	Q4V8A2	CDC27_RAT	Cdc27	Cell division cycle protein 27 homolog	1	LAEGEQILSGGVFNK	LAEGEQILSGGVFNK	2	LAEGEQILSGGVFNK2	7011.95	5864.01	6853.04
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	LAEGLHQGESDVAR	LAEGLHQGESDVAR	2	LAEGLHQGESDVAR2	2203.7		864.89
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	LAEGLHQGESDVAR	LAEGLHQGESDVAR	3	LAEGLHQGESDVAR3	77692.9	82393.1	64487
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	LAEGVQLLCLIDK	LAEGVQLLC(UniMod:4)LIDK	2	LAEGVQLLC(UniMod:4)LIDK2	12048.3	10023.9	16097.3
A0A8I6A8Y6	A0A8I6A8Y6	A0A8I6A8Y6_RAT	Sf3b2	Splicing factor 3b, subunit 2	1	LAEIGAPIQGSR	LAEIGAPIQGSR	2	LAEIGAPIQGSR2	6612.91	9569.97	9575.67
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	LAEIIWQNR	LAEIIWQNR	2	LAEIIWQNR2	105189	88584.6	104632
Q62868	Q62868;Q63644	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	0	LAEIMNR	LAEIMNR	2	LAEIMNR2	251600	269391	278569
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LAEISDVWEEMK	LAEISDVWEEMK	2	LAEISDVWEEMK2	195515	213800	199781
A0A0G2K3H2	A0A0G2K3H2;A0A8I6ANH8	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	0	LAEISHR	LAEISHR	2	LAEISHR2		35182.1	1244.3
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	LAEKEETGVAMR	LAEKEETGVAMR	3	LAEKEETGVAMR3	11390.1	11297.4	10016.6
D3ZZ38	D3ZZ38	D3ZZ38_RAT	Snx18	Sorting nexin	1	LAEKFPVISVPHLPEK	LAEKFPVISVPHLPEK	4	LAEKFPVISVPHLPEK4		3249.07	
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	LAELEEFINGPNNAHIQQVGDR	LAELEEFINGPNNAHIQQVGDR	3	LAELEEFINGPNNAHIQQVGDR3	523910	582550	536268
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	LAELEEFINGPNNAHIQQVGDR	LAELEEFINGPNNAHIQQVGDR	4	LAELEEFINGPNNAHIQQVGDR4	15280.8	13340	20134.1
A0A0G2JUU7	A0A0G2JUU7	A0A0G2JUU7_RAT	Tubgcp3	Gamma-tubulin complex component	1	LAELGWLHNK	LAELGWLHNK	3	LAELGWLHNK3	6490.4	5891.15	5489.73
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	LAELLLEHDAHPNAAGK	LAELLLEHDAHPNAAGK	3	LAELLLEHDAHPNAAGK3	4722.35		7108.37
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	LAELLLEHDAHPNAAGK	LAELLLEHDAHPNAAGK	4	LAELLLEHDAHPNAAGK4	12836.7	6168.75	3653.15
Q9EQG6	Q9EQG6	KDIS_RAT	Kidins220	Kinase D-interacting substrate of 220 kDa	1	LAELLLR	LAELLLR	2	LAELLLR2	7542.1	10036.3	4228.48
D4ADF5	D4ADF5	D4ADF5_RAT	Pdcd5	Programmed cell death 5	1	LAELQAK	LAELQAK	2	LAELQAK2	131182	132462	123255
A0A0G2K516	A0A0G2K516	A0A0G2K516_RAT	Stx11	Syntaxin 11	1	LAELQELSR	LAELQELSR	2	LAELQELSR2	1.04303e+06	1.15583e+06	1.08385e+06
A0A8I6GBE0	A0A8I6GBE0	A0A8I6GBE0_RAT	Dpp9	Dipeptidyl peptidase 9	1	LAELQTDHQGK	LAELQTDHQGK	3	LAELQTDHQGK3	3478.69	6735.83	5123.83
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	LAELSLHMK	LAELSLHMK	2	LAELSLHMK2	6144.48	7236.02	6730.06
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LAELSQR	LAELSQR	2	LAELSQR2	103328	148891	134369
B2RYM5	B2RYM5	BRCC3_RAT	Brcc3	Lys-63-specific deubiquitinase BRCC36	1	LAELTGRPMR	LAELTGRPMR	3	LAELTGRPMR3	171330	180243	209124
Q5PQN7	Q5PQN7	LZIC_RAT	Lzic	Protein LZIC	1	LAEMDRDLMVGK	LAEMDRDLMVGK	3	LAEMDRDLMVGK3	88076	76485	83620.9
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	LAEMEEIK	LAEMEEIK	2	LAEMEEIK2	68802.4	52461.7	60303.4
A0A8I5ZTB8	A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	LAEMEEPALLPGENIK	LAEMEEPALLPGENIK	2	LAEMEEPALLPGENIK2	27393.7	31929.5	28170.6
A0A8I5ZTB8	A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	LAEMEEPALLPGENIK	LAEMEEPALLPGENIK	3	LAEMEEPALLPGENIK3	7648.98	13578.3	10654.7
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	LAEMETFR	LAEMETFR	2	LAEMETFR2	91921.8	90207.8	104784
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	LAEMLPSVSSILT	LAEMLPSVSSILT	2	LAEMLPSVSSILT2	4983.23		8011.9
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	LAEMPADSGYPAYLGAR	LAEMPADSGYPAYLGAR	2	LAEMPADSGYPAYLGAR2	95266.2	85794.5	94041.1
P29410	A0A8I5ZQQ9;P29410	KAD2_RAT	Ak2	Adenylate kinase 2, mitochondrial	0	LAENFCVCHLATGDMLR	LAENFC(UniMod:4)VC(UniMod:4)HLATGDMLR	3	LAENFC(UniMod:4)VC(UniMod:4)HLATGDMLR3	113331	114496	104561
P17955	P17955	NUP62_RAT	Nup62	Nuclear pore glycoprotein p62	1	LAENIDAQLK	LAENIDAQLK	2	LAENIDAQLK2	5830.84	5979.99	7418.07
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	LAEPGQSCK	LAEPGQSC(UniMod:4)K	2	LAEPGQSC(UniMod:4)K2	93864.4	102494	
D3ZXY2	D3ZXY2	D3ZXY2_RAT	Pdzd8	PDZ domain containing 8	1	LAEPGTDLVEPSPK	LAEPGTDLVEPSPK	2	LAEPGTDLVEPSPK2	11453.2	14019.1	19082.3
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	LAEPQEVPQEAEPAEELMK	LAEPQEVPQEAEPAEELMK	3	LAEPQEVPQEAEPAEELMK3	20253.2	30266.2	26874.7
Q66H39	Q66H39	ABCF3_RAT	Abcf3	ATP-binding cassette sub-family F member 3	1	LAEPQNQGNNQVLLDAPIQLSK	LAEPQNQGNNQVLLDAPIQLSK	3	LAEPQNQGNNQVLLDAPIQLSK3	1454.37	2459.84	3125.43
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	LAEPSQLLK	LAEPSQLLK	2	LAEPSQLLK2	34011.3	23341.3	17842.8
P62260	Q5EBB0;P35213;P62260;P63102;P68255;P61983;P68511;G3V9A3	1433E_RAT	Ywhae	14-3-3 protein epsilon	0	LAEQAER	LAEQAER	1	LAEQAER1			189726
P62260	Q5EBB0;P35213;P62260;P63102;P68255;P61983;P68511;G3V9A3	1433E_RAT	Ywhae	14-3-3 protein epsilon	0	LAEQAER	LAEQAER	2	LAEQAER2			109307
P61983	P35213;P61983	1433G_RAT	Ywhag	14-3-3 protein gamma	0	LAEQAERYDDMAAAMK	LAEQAERYDDMAAAMK	3	LAEQAERYDDMAAAMK3	71928	92753.4	141181
P63102	P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	1	LAEQAERYDDMAACMK	LAEQAERYDDMAAC(UniMod:4)MK	2	LAEQAERYDDMAAC(UniMod:4)MK2	6689.17	4280.84	4111.9
P63102	P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	1	LAEQAERYDDMAACMK	LAEQAERYDDMAAC(UniMod:4)MK	3	LAEQAERYDDMAAC(UniMod:4)MK3	109467	182431	207598
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	LAEQAERYDDMASAMK	LAEQAERYDDMASAMK	2	LAEQAERYDDMASAMK2	1813.56	5627.26	1473.41
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	LAEQAERYDDMASAMK	LAEQAERYDDMASAMK	3	LAEQAERYDDMASAMK3	52187.3	117574	119923
P68255	P68255	1433T_RAT	Ywhaq	14-3-3 protein theta	1	LAEQAERYDDMATCMK	LAEQAERYDDMATC(UniMod:4)MK	3	LAEQAERYDDMATC(UniMod:4)MK3	25673.1	33039.2	37964.6
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	LAEQAERYDEMVESMK	LAEQAERYDEMVESMK	2	LAEQAERYDEMVESMK2	21596.4	20750.6	11287.6
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	LAEQAERYDEMVESMK	LAEQAERYDEMVESMK	3	LAEQAERYDEMVESMK3	853346	880168	908241
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	LAEQAERYDEMVESMKK	LAEQAERYDEMVESMKK	3	LAEQAERYDEMVESMKK3	43181.3	75425.2	93086.1
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	LAEQAERYDEMVESMKK	LAEQAERYDEMVESMKK	4	LAEQAERYDEMVESMKK4	19114.8	19288.6	21091.4
D4A3I4	D4A3I4;A0A0G2K8T5	D4A3I4_RAT	Btf3l4	Transcription factor BTF3	0	LAEQFPR	LAEQFPR	2	LAEQFPR2	65689.3	39826.7	47388.3
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	LAEQIATLCATLK	LAEQIATLC(UniMod:4)ATLK	2	LAEQIATLC(UniMod:4)ATLK2	10738	7922.7	2132.38
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	LAESAEGR	LAESAEGR	2	LAESAEGR2			275502
D4A4P4	D4A4P4	D4A4P4_RAT	Flad1	FAD synthase	1	LAESGSCLGK	LAESGSC(UniMod:4)LGK	2	LAESGSC(UniMod:4)LGK2	13207.4	12452.1	10391.7
A0A8I6A538	A0A8I6A538	A0A8I6A538_RAT	Nin	Ninein	1	LAESSLLEHR	LAESSLLEHR	3	LAESSLLEHR3	8819.53		12953.9
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	LAESSVDLNLK	LAESSVDLNLK	2	LAESSVDLNLK2	16976.2	12872.1	6188.45
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	LAETHQQECCQK	LAETHQQEC(UniMod:4)C(UniMod:4)QK	2	LAETHQQEC(UniMod:4)C(UniMod:4)QK2			15755.6
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	LAETMNNIDR	LAETMNNIDR	2	LAETMNNIDR2	368514	416637	390883
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	LAETTDK	LAETTDK	1	LAETTDK1		714.867	8326.88
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	LAETTDKVK	LAETTDKVK	2	LAETTDKVK2	39009.8		35867.2
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LAETVFNFQEK	LAETVFNFQEK	2	LAETVFNFQEK2	155597	208539	206711
P06214	P06214	HEM2_RAT	Alad	Delta-aminolevulinic acid dehydratase	1	LAEVALAYAK	LAEVALAYAK	2	LAEVALAYAK2	24132.3	42558	32086.1
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	LAEVGQYEQVK	LAEVGQYEQVK	2	LAEVGQYEQVK2	3582.29	6709.11	5274.94
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	LAEVGRDYESSQGEIR	LAEVGRDYESSQGEIR	3	LAEVGRDYESSQGEIR3	6631.37	10125	8215.21
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	LAEVGRVYLFLQPK	LAEVGRVYLFLQPK	3	LAEVGRVYLFLQPK3	6431.21	4442.24	7580.93
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	LAEVLEAVMPHLDQTPSPLVSSVFHR	LAEVLEAVMPHLDQTPSPLVSSVFHR	3	LAEVLEAVMPHLDQTPSPLVSSVFHR3	8123.25	21901.5	14155.4
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	LAEVLEAVMPHLDQTPSPLVSSVFHR	LAEVLEAVMPHLDQTPSPLVSSVFHR	4	LAEVLEAVMPHLDQTPSPLVSSVFHR4	20419.7	27563.4	30102.1
D4A7Z5	D4A7Z5	D4A7Z5_RAT	LOC100360940	Direct IAP-binding protein with low pI	1	LAEVQTQELR	LAEVQTQELR	2	LAEVQTQELR2	24548.1	22761.4	19250
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	LAEVTQNIEK	LAEVTQNIEK	2	LAEVTQNIEK2	71587.4	64842.7	71468.8
Q10473	Q10473;Q6UE39	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	0	LAEVWMDEFK	LAEVWMDEFK	2	LAEVWMDEFK2	52046.7	35432	49205.3
Q6Q0N1	Q6Q0N1	CNDP2_RAT	Cndp2	Cytosolic non-specific dipeptidase	1	LAEWVAIQSVSAWPEK	LAEWVAIQSVSAWPEK	2	LAEWVAIQSVSAWPEK2	4198.04	7163.7	6744.31
Q6Q0N1	Q6Q0N1	CNDP2_RAT	Cndp2	Cytosolic non-specific dipeptidase	1	LAEWVAIQSVSAWPEKR	LAEWVAIQSVSAWPEKR	3	LAEWVAIQSVSAWPEKR3	1518.11		2450.46
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	LAEYLVER	LAEYLVER	2	LAEYLVER2	21625.8	18893.6	16387.2
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	LAEYQNK	LAEYQNK	2	LAEYQNK2		21276.9	
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	LAFAFGDR	LAFAFGDR	2	LAFAFGDR2	23406.2	13977.1	11182.3
Q4KM74	Q4KM74	SC22B_RAT	Sec22b	Vesicle-trafficking protein SEC22b	1	LAFAYLEDLHSEFDEQHGK	LAFAYLEDLHSEFDEQHGK	3	LAFAYLEDLHSEFDEQHGK3	14069.3	15930.1	20590.6
Q4KM74	Q4KM74	SC22B_RAT	Sec22b	Vesicle-trafficking protein SEC22b	1	LAFAYLEDLHSEFDEQHGK	LAFAYLEDLHSEFDEQHGK	4	LAFAYLEDLHSEFDEQHGK4	93815.6	62360.3	75027.1
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	LAFEVAEK	LAFEVAEK	2	LAFEVAEK2	58896.8	58649.9	60706.3
A0A8I6AN39	A0A8I6AN39	A0A8I6AN39_RAT	Eefsec	Eukaryotic elongation factor, selenocysteine-tRNA-specific	1	LAFHGVLVQGLEDK	LAFHGVLVQGLEDK	3	LAFHGVLVQGLEDK3	1517.39	5350.34	2352.16
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	LAFIEDLCGPR	LAFIEDLC(UniMod:4)GPR	2	LAFIEDLC(UniMod:4)GPR2	1.92173e+06	1.56121e+06	1.55717e+06
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	LAFIEDLCGPR	LAFIEDLC(UniMod:4)GPR	3	LAFIEDLC(UniMod:4)GPR3	16685.8	13715	
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	LAFIEDLCGPRR	LAFIEDLC(UniMod:4)GPRR	3	LAFIEDLC(UniMod:4)GPRR3	28008.6	18960.9	25492.5
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	LAFLNVQAAEEALPK	LAFLNVQAAEEALPK	2	LAFLNVQAAEEALPK2	145309	134646	137752
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	LAFLNVQAAEEALPK	LAFLNVQAAEEALPK	3	LAFLNVQAAEEALPK3	4783.15	5183.11	6129.2
Q6AY17	Q6AY17	AB17B_RAT	Abhd17b	Alpha/beta hydrolase domain-containing protein 17B	1	LAFLPPDPTYTLMCDESGSR	LAFLPPDPTYTLMC(UniMod:4)DESGSR	3	LAFLPPDPTYTLMC(UniMod:4)DESGSR3	7540.75	17147.2	8413.31
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	LAFLTNTSGK	LAFLTNTSGK	2	LAFLTNTSGK2	15356.6	14658	8383.02
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	LAFNKPSPVSLLEK	LAFNKPSPVSLLEK	3	LAFNKPSPVSLLEK3	95571.3	100608	99241.7
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LAFPEGK	LAFPEGK	1	LAFPEGK1	135108	101640	83281.8
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LAFPEGK	LAFPEGK	2	LAFPEGK2	6.1304e+06	6.63191e+06	6.33557e+06
Q8K4C0	Q8K4C0	FMO5_RAT	Fmo5	Flavin-containing monooxygenase 5	1	LAFQLLVGPCTPVQYR	LAFQLLVGPC(UniMod:4)TPVQYR	2	LAFQLLVGPC(UniMod:4)TPVQYR2	8000.94		5174.04
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	LAFQNVDPLGENIR	LAFQNVDPLGENIR	2	LAFQNVDPLGENIR2	19753.5	13965.4	14977.6
O08774	O08774	RGS12_RAT	Rgs12	Regulator of G-protein signaling 12	1	LAFSAVCPDDRR	LAFSAVC(UniMod:4)PDDRR	3	LAFSAVC(UniMod:4)PDDRR3	17020.4	21363.2	33612.7
P20069	P20069	MPPA_RAT	Pmpca	Mitochondrial-processing peptidase subunit alpha	1	LAFSSTAR	LAFSSTAR	2	LAFSSTAR2	38665.2		30266.8
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	LAFTLDHETGLPQGCHIYEYR	LAFTLDHETGLPQGC(UniMod:4)HIYEYR	3	LAFTLDHETGLPQGC(UniMod:4)HIYEYR3	2396.79	9005.77	6876.82
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	LAFTLDHETGLPQGCHIYEYR	LAFTLDHETGLPQGC(UniMod:4)HIYEYR	4	LAFTLDHETGLPQGC(UniMod:4)HIYEYR4	35696	40876.8	39894.3
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	LAFTQSR	LAFTQSR	2	LAFTQSR2	60093.1	69165.9	52853
A0A8I6AEI3	A0A8I6AEI3	A0A8I6AEI3_RAT	Wwox	WW domain-containing oxidoreductase	1	LAFTVDDNPTKPTTR	LAFTVDDNPTKPTTR	3	LAFTVDDNPTKPTTR3	33799.6	46787.9	45046.5
Q9Z272	Q66H91;Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	0	LAFYLCGR	LAFYLC(UniMod:4)GR	2	LAFYLC(UniMod:4)GR2	32157.3	22992.8	36024.2
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	LAFYPNQDGDILR	LAFYPNQDGDILR	2	LAFYPNQDGDILR2	169858	188606	184186
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	LAFYYDLDK	LAFYYDLDK	2	LAFYYDLDK2	89891.4	73342.9	72696.4
P15589	P15589	STS_RAT	Sts	Steryl-sulfatase	1	LAGAELPTDR	LAGAELPTDR	2	LAGAELPTDR2	14998.8	15597.1	10802.5
D4A929	D4A929	WDR81_RAT	Wdr81	WD repeat-containing protein 81	1	LAGAPALAPEPPLIPR	LAGAPALAPEPPLIPR	2	LAGAPALAPEPPLIPR2	11625.4	14946.9	6663.1
G3V8Y8	G3V8Y8	G3V8Y8_RAT	Hip1	Huntingtin interacting protein 1	1	LAGAQDSMCQQIK	LAGAQDSMC(UniMod:4)QQIK	2	LAGAQDSMC(UniMod:4)QQIK2	5749.72	4857.48	1328.22
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	LAGASPATVAAAAAGSGSK	LAGASPATVAAAAAGSGSK	2	LAGASPATVAAAAAGSGSK2	98292.9	107104	63260
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	LAGASPATVAAAAAGSGSK	LAGASPATVAAAAAGSGSK	3	LAGASPATVAAAAAGSGSK3	44944.6	46163.3	29394.4
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	LAGASPATVAAAAAGSGSKDPLAR	LAGASPATVAAAAAGSGSKDPLAR	3	LAGASPATVAAAAAGSGSKDPLAR3	56827.2	81794.7	67607.6
O08697	O08697	ARL2_RAT	Arl2	ADP-ribosylation factor-like protein 2	1	LAGATLLIFANK	LAGATLLIFANK	2	LAGATLLIFANK2	15607.3	14826.3	13735.5
Q4V8F9	Q4V8F9	HSDL2_RAT	Hsdl2	Hydroxysteroid dehydrogenase-like protein 2	1	LAGCTVFITGASR	LAGC(UniMod:4)TVFITGASR	2	LAGC(UniMod:4)TVFITGASR2	2120.39	3711.89	4014.23
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	LAGDDMEISVK	LAGDDMEISVK	2	LAGDDMEISVK2	111425	114068	105366
Q63942	Q63942	RAB3D_RAT	Rab3d	GTP-binding protein Rab-3D	1	LAGDLGFEFFEASAK	LAGDLGFEFFEASAK	2	LAGDLGFEFFEASAK2	134161	117977	116360
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	LAGDNALDVFQK	LAGDNALDVFQK	2	LAGDNALDVFQK2	542357	545886	521567
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	LAGDNALDVFQK	LAGDNALDVFQK	3	LAGDNALDVFQK3			11537.9
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	LAGDPAPVVNDIHK	LAGDPAPVVNDIHK	2	LAGDPAPVVNDIHK2	2495.28		1404.52
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	LAGDPAPVVNDIHK	LAGDPAPVVNDIHK	3	LAGDPAPVVNDIHK3	32873	28313.8	36239.4
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	LAGDPAPVVNDIHKK	LAGDPAPVVNDIHKK	3	LAGDPAPVVNDIHKK3	21969.9	23091	27970.7
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	LAGDPAPVVNDIHKK	LAGDPAPVVNDIHKK	4	LAGDPAPVVNDIHKK4	45973.7	30542	42631.9
P19814	P19814	TGON3_RAT	Ttgn1	Trans-Golgi network integral membrane protein TGN38	1	LAGDSDFSLKPEK	LAGDSDFSLKPEK	2	LAGDSDFSLKPEK2	14630.8	6903.76	13170.4
P19814	P19814	TGON3_RAT	Ttgn1	Trans-Golgi network integral membrane protein TGN38	1	LAGDSDFSLKPEK	LAGDSDFSLKPEK	3	LAGDSDFSLKPEK3	226742	277526	254277
P19814	P19814	TGON3_RAT	Ttgn1	Trans-Golgi network integral membrane protein TGN38	1	LAGDSDFSLKPEKGDK	LAGDSDFSLKPEKGDK	3	LAGDSDFSLKPEKGDK3	3363.33		6112.5
P19814	P19814	TGON3_RAT	Ttgn1	Trans-Golgi network integral membrane protein TGN38	1	LAGDSDFSLKPEKGDK	LAGDSDFSLKPEKGDK	4	LAGDSDFSLKPEKGDK4	16513	22836.9	18416.2
P0C2X9	P0C2X9	AL4A1_RAT	Aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1	LAGECGGK	LAGEC(UniMod:4)GGK	2	LAGEC(UniMod:4)GGK2			33134.8
Q62921	Q62921	HOIL1_RAT	Rbck1	RanBP-type and C3HC4-type zinc finger-containing protein 1	1	LAGEEEALR	LAGEEEALR	2	LAGEEEALR2	27537.3	18198.8	17526.3
A0A8I6AE33	A0A8I6AE33	A0A8I6AE33_RAT	Wdr37	WD repeat domain 37	1	LAGEGQAIDGAELSK	LAGEGQAIDGAELSK	2	LAGEGQAIDGAELSK2	17346.4	17801.1	20275.4
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	LAGEITSVIDYVEDIK	LAGEITSVIDYVEDIK	3	LAGEITSVIDYVEDIK3	4805.16	4670.3	8979.59
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	LAGENMTGAAK	LAGENMTGAAK	2	LAGENMTGAAK2	228661	203192	218449
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	LAGESESNLR	LAGESESNLR	2	LAGESESNLR2	1.10975e+06	1.11894e+06	1.12733e+06
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	LAGESESNLRK	LAGESESNLRK	2	LAGESESNLRK2	6054.79	50384.4	35669.4
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	LAGFLDLTEQEFR	LAGFLDLTEQEFR	2	LAGFLDLTEQEFR2	79049.9	92003.7	83130.5
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	LAGFLDLTEQEFR	LAGFLDLTEQEFR	3	LAGFLDLTEQEFR3	2295.52	2333.53	2534
Q4V7E6	Q4V7E6	Q4V7E6_RAT	Wwtr1	WW domain containing transcription regulator 1	1	LAGGAQHVR	LAGGAQHVR	2	LAGGAQHVR2			3616.73
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	LAGGDWFTSR	LAGGDWFTSR	2	LAGGDWFTSR2	203792	211538	207000
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	LAGGMARPCSASGPADAR	LAGGMARPC(UniMod:4)SASGPADAR	3	LAGGMARPC(UniMod:4)SASGPADAR3	73722.4	132759	150318
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	LAGGSPEVWAGSVR	LAGGSPEVWAGSVR	2	LAGGSPEVWAGSVR2	74682.7	83354.9	81471.7
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	LAGGYENVPTVDIHMK	LAGGYENVPTVDIHMK	3	LAGGYENVPTVDIHMK3	44177.3	28709.3	31753.7
D3ZP13	D3ZP13	D3ZP13_RAT	Qsox2	Sulfhydryl oxidase	1	LAGHLSEDPKFPK	LAGHLSEDPKFPK	3	LAGHLSEDPKFPK3	4346.79	7883.49	7679.57
B3DMA2	B3DMA2	ACD11_RAT	Acad11	Acyl-CoA dehydrogenase family member 11	1	LAGIAQGVYSR	LAGIAQGVYSR	2	LAGIAQGVYSR2	12726	11219.1	21435.8
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LAGIEER	LAGIEER	2	LAGIEER2	1.03497e+06	1.17149e+06	1.18221e+06
Q62910	Q62910	SYNJ1_RAT	Synj1	Synaptojanin-1	1	LAGIQEFQDK	LAGIQEFQDK	2	LAGIQEFQDK2	8330.76	15223.6	11436.2
Q62910	Q62910	SYNJ1_RAT	Synj1	Synaptojanin-1	1	LAGIQEFQDKR	LAGIQEFQDKR	3	LAGIQEFQDKR3	343.319	1848.53	2953.18
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	LAGIVLPNDGR	LAGIVLPNDGR	2	LAGIVLPNDGR2	8.07953e+06	8.02101e+06	9.68222e+06
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	LAGKEELK	LAGKEELK	2	LAGKEELK2	17517.4	24016.5	17401.6
D3ZRL3	D3ZRL3	D3ZRL3_RAT	Dusp23	Dual specificity phosphatase 23	1	LAGLALPR	LAGLALPR	2	LAGLALPR2	5185.1	7382.74	
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	LAGLAPFR	LAGLAPFR	2	LAGLAPFR2	28623	36346.8	34049.5
Q704E8	Q704E8	ABCB7_RAT	Abcb7	Iron-sulfur clusters transporter ABCB7, mitochondrial	1	LAGLHDAILR	LAGLHDAILR	2	LAGLHDAILR2	9011.75		3582.35
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	LAGLPGEHQQR	LAGLPGEHQQR	3	LAGLPGEHQQR3	14409.2	15655.6	16233.2
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	LAGMHYLHVTLKPTIEEICQSHK	LAGMHYLHVTLKPTIEEIC(UniMod:4)QSHK	4	LAGMHYLHVTLKPTIEEIC(UniMod:4)QSHK4	53293.9	44412	33287.7
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	LAGPQLVQMFIGDGAK	LAGPQLVQMFIGDGAK	2	LAGPQLVQMFIGDGAK2	90913.6	97098.7	101948
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	LAGPQLVQMFIGDGAK	LAGPQLVQMFIGDGAK	3	LAGPQLVQMFIGDGAK3	18481.2	21071.1	16594.5
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	LAGSALPDK	LAGSALPDK	1	LAGSALPDK1	2578.52		830.83
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	LAGSALPDK	LAGSALPDK	2	LAGSALPDK2	160932	136298	147235
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	LAGSALPDKVSDKS	LAGSALPDKVSDKS	3	LAGSALPDKVSDKS3	40650.7	73922.5	50168.2
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	LAGTEQSGQPCSR	LAGTEQSGQPC(UniMod:4)SR	2	LAGTEQSGQPC(UniMod:4)SR2	12171.9	12135.1	8409.31
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	LAGTGLCSDPEEPGAPAAIMVNLLR	LAGTGLC(UniMod:4)SDPEEPGAPAAIMVNLLR	3	LAGTGLC(UniMod:4)SDPEEPGAPAAIMVNLLR3	38846.7	32078	55758.3
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	LAGTQPLEVLEAVQR	LAGTQPLEVLEAVQR	2	LAGTQPLEVLEAVQR2	173846	106328	134352
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	LAGTQPLEVLEAVQR	LAGTQPLEVLEAVQR	3	LAGTQPLEVLEAVQR3	48879.3	47941.9	47592.4
A0A8I6A6I4	A0A8I6A6I4	A0A8I6A6I4_RAT	Atp11b	Phospholipid-transporting ATPase	1	LAGVFQYIEK	LAGVFQYIEK	2	LAGVFQYIEK2	12417.6	9668.55	9526.53
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	LAGVHALLR	LAGVHALLR	2	LAGVHALLR2	2282.46	4085.07	3037.9
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	LAGVINFQR	LAGVINFQR	2	LAGVINFQR2	52187.4	56365.5	58891.4
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	LAGVINFQRPK	LAGVINFQRPK	2	LAGVINFQRPK2	14387.5	16102.7	12097.1
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	LAGVINFQRPK	LAGVINFQRPK	3	LAGVINFQRPK3	190638	199724	188166
P69478	P69478	CHSTB_RAT	Chst11	Carbohydrate sulfotransferase 11	1	LAGVSGYLK	LAGVSGYLK	2	LAGVSGYLK2	15234.9	13898	20836.3
P70470	P70470	LYPA1_RAT	Lypla1	Acyl-protein thioesterase 1	1	LAGVTALSCWLPLR	LAGVTALSC(UniMod:4)WLPLR	2	LAGVTALSC(UniMod:4)WLPLR2	12107.7	5689.99	18083.6
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	LAGYLHTLVQNLVNNGYVR	LAGYLHTLVQNLVNNGYVR	3	LAGYLHTLVQNLVNNGYVR3	108820	89189	63669.6
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	LAGYLHTLVQNLVNNGYVR	LAGYLHTLVQNLVNNGYVR	4	LAGYLHTLVQNLVNNGYVR4	9554.71	10436.5	3223.09
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	LAGYLHTLVQNLVNNGYVRDETVR	LAGYLHTLVQNLVNNGYVRDETVR	3	LAGYLHTLVQNLVNNGYVRDETVR3	24442.9	45333.2	23766.5
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	LAGYLHTLVQNLVNNGYVRDETVR	LAGYLHTLVQNLVNNGYVRDETVR	4	LAGYLHTLVQNLVNNGYVRDETVR4	53190.8	44675.2	23462.4
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	LAHALFHTQTK	LAHALFHTQTK	3	LAHALFHTQTK3	14104.1	16379.9	15188.6
M0R4M1	M0R4M1	M0R4M1_RAT	Nlrc5	NLR family, CARD domain containing 5	1	LAHCDLGTDHGLLMR	LAHC(UniMod:4)DLGTDHGLLMR	4	LAHC(UniMod:4)DLGTDHGLLMR4	3965.04	5230.48	5736.33
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	LAHCEELR	LAHC(UniMod:4)EELR	2	LAHC(UniMod:4)EELR2	16521.4	15160.5	18919.4
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	LAHDELPGFPQQR	LAHDELPGFPQQR	3	LAHDELPGFPQQR3	38400.3	39488.3	26306.9
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	LAHEFLQNFCAGNQQNQALLHK	LAHEFLQNFC(UniMod:4)AGNQQNQALLHK	3	LAHEFLQNFC(UniMod:4)AGNQQNQALLHK3	2224.12	5598.58	3024.97
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	LAHEFLQNFCAGNQQNQALLHK	LAHEFLQNFC(UniMod:4)AGNQQNQALLHK	4	LAHEFLQNFC(UniMod:4)AGNQQNQALLHK4	8840.24	9651.48	13156.8
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	LAHEIEALK	LAHEIEALK	2	LAHEIEALK2	9944.28	14564.6	10044.8
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	LAHGFSNHR	LAHGFSNHR	2	LAHGFSNHR2			4569.96
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	LAHGGQVNLDMEDHRDEDFVKPK	LAHGGQVNLDMEDHRDEDFVKPK	4	LAHGGQVNLDMEDHRDEDFVKPK4	22451.2	8955.99	17898.8
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	LAHGVNHAAGQVGK	LAHGVNHAAGQVGK	2	LAHGVNHAAGQVGK2			7948.24
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	LAHLGVQVK	LAHLGVQVK	2	LAHLGVQVK2	36878.8	32244.4	25896
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	LAHLSEEK	LAHLSEEK	2	LAHLSEEK2	10235	8792.47	8840.79
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	LAHNAIASLR	LAHNAIASLR	2	LAHNAIASLR2	43382.7	35546	22698.9
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	LAHNAIASLRPR	LAHNAIASLRPR	2	LAHNAIASLRPR2	27890.4	17555.7	16190.6
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	LAHNAIASLRPR	LAHNAIASLRPR	3	LAHNAIASLRPR3	3.47658e+06	3.93833e+06	3.40551e+06
D4A3X3	D4A3X3	D4A3X3_RAT	Isg15	ISG15 ubiquitin-like modifier	1	LAHQSGEMLQDGVALIR	LAHQSGEMLQDGVALIR	3	LAHQSGEMLQDGVALIR3	25871.3	29769.2	35339.5
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	LAHTANAGEWTLTVQEAVTWK	LAHTANAGEWTLTVQEAVTWK	3	LAHTANAGEWTLTVQEAVTWK3	14300.2	19920.6	9749.61
Q8VHI8	Q8VHI8	SEC20_RAT	Bnip1	Vesicle transport protein SEC20	1	LAIDNLEK	LAIDNLEK	2	LAIDNLEK2	22474.3	19275.4	
P70550	P70550	RAB8B_RAT	Rab8b	Ras-related protein Rab-8B	1	LAIDYGIK	LAIDYGIK	2	LAIDYGIK2	699068	688083	775081
Q63372	Q63372	NRX1A_RAT	Nrxn1	Neurexin-1	1	LAIGFSTVQK	LAIGFSTVQK	2	LAIGFSTVQK2	16752.9	15693.8	13966.2
F1LU71	F1LU71	AUHM_RAT	Auh	Methylglutaconyl-CoA hydratase, mitochondrial	1	LAIIPGGGGTQR	LAIIPGGGGTQR	2	LAIIPGGGGTQR2	282975	211662	341146
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	LAIKEPDDKIPK	LAIKEPDDKIPK	2	LAIKEPDDKIPK2	1386.04	4312.02	
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	LAIKEPDDKIPK	LAIKEPDDKIPK	3	LAIKEPDDKIPK3	93304.8	66403	55702.7
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	LAILAEQYDHSINEMLSTQALR	LAILAEQYDHSINEMLSTQALR	3	LAILAEQYDHSINEMLSTQALR3	28249.2	35169.3	36065.4
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	LAILAEQYEQSINEMMASQALR	LAILAEQYEQSINEMMASQALR	3	LAILAEQYEQSINEMMASQALR3	49921.8	31910	61412.6
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	LAILGIHNEVSK	LAILGIHNEVSK	2	LAILGIHNEVSK2	255394	341776	327333
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	LAILGIHNEVSK	LAILGIHNEVSK	3	LAILGIHNEVSK3	5.58326e+06	683411	6.66594e+06
O88563	O88563	MRP3_RAT	Abcc3	ATP-binding cassette sub-family C member 3	1	LAILGYR	LAILGYR	2	LAILGYR2	163395		150527
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LAILKEDMEMK	LAILKEDMEMK	3	LAILKEDMEMK3	9083.72	6568.07	18014.3
A0A8I5Y8A9	A0A8I5Y8A9	A0A8I5Y8A9_RAT	Gltpd2	Glycolipid transfer protein domain containing 2	1	LAILTLPSR	LAILTLPSR	2	LAILTLPSR2	66853.7	67991.4	76067.3
P50503	P50503;A0A8I5ZKD8	F10A1_RAT	St13	Hsc70-interacting protein	0	LAILYAK	LAILYAK	1	LAILYAK1	3100	3880.71	2888.14
P50503	P50503;A0A8I5ZKD8	F10A1_RAT	St13	Hsc70-interacting protein	0	LAILYAK	LAILYAK	2	LAILYAK2	480726	550139	486974
Q7TNJ2	Q7TNJ2;Q9ESR9;D4A7J3	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	0	LAIMVNGR	LAIMVNGR	2	LAIMVNGR2	7724.49	10344.5	7974.25
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	LAIQEIMSLTSPSAPPTSR	LAIQEIMSLTSPSAPPTSR	3	LAIQEIMSLTSPSAPPTSR3	45914.8	52947.8	37312.1
P47853	P47853	PGS1_RAT	Bgn	Biglycan	1	LAIQFGNYK	LAIQFGNYK	2	LAIQFGNYK2	50184.7	51167.1	40727.2
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	LAISEDHVASVK	LAISEDHVASVK	2	LAISEDHVASVK2	7015.33	5821.4	
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	LAISEDHVASVK	LAISEDHVASVK	3	LAISEDHVASVK3	123819	93953	75935.8
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	LAITIGQK	LAITIGQK	2	LAITIGQK2	241609	241865	227485
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	LAITSVSVHSSPSAK	LAITSVSVHSSPSAK	3	LAITSVSVHSSPSAK3	146310	147754	126822
Q5EB77	A0A8I5ZQR4;Q5EB77	RAB18_RAT	Rab18	Ras-related protein Rab-18	0	LAIWDTAGQER	LAIWDTAGQER	2	LAIWDTAGQER2	132785	121533	126709
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	LAKDREAAEGLGSHER	LAKDREAAEGLGSHER	4	LAKDREAAEGLGSHER4		7579.53	10575.1
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	LAKEVQAAQAR	LAKEVQAAQAR	2	LAKEVQAAQAR2		64673.4	
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	LAKEVQAAQAR	LAKEVQAAQAR	3	LAKEVQAAQAR3		170175	
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	LAKHLEVNVWIIEPQGMR	LAKHLEVNVWIIEPQGMR	3	LAKHLEVNVWIIEPQGMR3	9214.91	12046.3	7461.11
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	LAKHLEVNVWIIEPQGMR	LAKHLEVNVWIIEPQGMR	4	LAKHLEVNVWIIEPQGMR4	12923.4	12081.1	10677.8
B1WBU6	B1WBU6;A0A8I5ZYI4	B1WBU6_RAT	Smox	Spermine oxidase	0	LAKPLPYTESSK	LAKPLPYTESSK	3	LAKPLPYTESSK3	4660.97	4637.98	2496.09
Q64303	Q64303;Q62829	PAK2_RAT	Pak2	Serine/threonine-protein kinase PAK 2	0	LAKPLSSLTPLILAAK	LAKPLSSLTPLILAAK	3	LAKPLSSLTPLILAAK3	46381.2	43222.4	31240.6
A0A8J8YGQ6	A0A8J8YGQ6	A0A8J8YGQ6_RAT	Dhrsx	Dehydrogenase/reductase X-linked	1	LALALFSLR	LALALFSLR	2	LALALFSLR2	17120.9	12759.1	10903.3
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	LALAQEDLISNR	LALAQEDLISNR	2	LALAQEDLISNR2	35964.3	27396.2	40566.2
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	LALASLGYEK	LALASLGYEK	2	LALASLGYEK2	50420.4	42913.5	47997.8
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	LALCELGNPMK	LALC(UniMod:4)ELGNPMK	2	LALC(UniMod:4)ELGNPMK2	5.56712e+06	5.39945e+06	5.65897e+06
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	LALCELGNPMKK	LALC(UniMod:4)ELGNPMKK	2	LALC(UniMod:4)ELGNPMKK2	76661	89207.5	81271.7
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	LALCELGNPMKK	LALC(UniMod:4)ELGNPMKK	3	LALC(UniMod:4)ELGNPMKK3	1.51257e+06	1.64487e+06	1.76476e+06
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	LALCSADSVAFPMLTHSTR	LALC(UniMod:4)SADSVAFPMLTHSTR	3	LALC(UniMod:4)SADSVAFPMLTHSTR3	64735.6	74298.4	49131.6
A0A8I6B124	A0A8I6B124	A0A8I6B124_RAT	Zswim8	Zinc finger, SWIM-type containing 8	1	LALCWAR	LALC(UniMod:4)WAR	2	LALC(UniMod:4)WAR2	10326.3	7950.8	6214.95
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	LALDAMK	LALDAMK	2	LALDAMK2	238076	261663	201991
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	LALDAMR	LALDAMR	2	LALDAMR2	91514.4	114359	101334
Q4QQW8	Q4QQW8	PLBL2_RAT	Plbd2	Putative phospholipase B-like 2	1	LALDGATWADVFR	LALDGATWADVFR	2	LALDGATWADVFR2		11738.1	3523.56
Q10758	A0A0G2JVA8;Q10758;Q6IG03;P47819;Q6IG12	K2C8_RAT	Krt8	Keratin, type II cytoskeletal 8	0	LALDIEIATYR	LALDIEIATYR	2	LALDIEIATYR2	879524	768600	528644
Q10758	A0A0G2JVA8;Q10758;Q6IG03;P47819;Q6IG12	K2C8_RAT	Krt8	Keratin, type II cytoskeletal 8	0	LALDIEIATYR	LALDIEIATYR	3	LALDIEIATYR3	7205.07	7215.2	6862.22
Q6P686	Q6P686	OSTF1_RAT	Ostf1	Osteoclast-stimulating factor 1	1	LALDMATNAACASLLK	LALDMATNAAC(UniMod:4)ASLLK	2	LALDMATNAAC(UniMod:4)ASLLK2	74280.4	76428.2	56397.9
Q6P686	Q6P686	OSTF1_RAT	Ostf1	Osteoclast-stimulating factor 1	1	LALDMATNAACASLLK	LALDMATNAAC(UniMod:4)ASLLK	3	LALDMATNAAC(UniMod:4)ASLLK3		15207.5	20137.5
Q6P686	Q6P686	OSTF1_RAT	Ostf1	Osteoclast-stimulating factor 1	1	LALDMATNAACASLLKK	LALDMATNAAC(UniMod:4)ASLLKK	3	LALDMATNAAC(UniMod:4)ASLLKK3	37658.8	36738.1	49218.6
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	LALDMEIHAYR	LALDMEIHAYR	3	LALDMEIHAYR3	15785.5	15719.9	14544.9
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	LALDNGGLAR	LALDNGGLAR	2	LALDNGGLAR2	2.09501e+06	2.03659e+06	2.01872e+06
Q6P6Q2	Q6IG02;Q6IFZ5;A0A8I5ZMI8;Q6IG00;Q6P6Q2;A0A0G2JUG1;A0A8I6G380;Q4FZU2;Q6IG05;A0A8I6AP90	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	0	LALDVEIATYR	LALDVEIATYR	2	LALDVEIATYR2	299621	228724	208911
Q6P6Q2	Q6IG02;Q6IFZ5;Q6IG00;Q6P6Q2;Q6IG05	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	0	LALDVEIATYRK	LALDVEIATYRK	2	LALDVEIATYRK2	3695.57	5453.03	
Q6P6Q2	Q6IG02;Q6IFZ5;Q6IG00;Q6P6Q2;Q6IG05	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	0	LALDVEIATYRK	LALDVEIATYRK	3	LALDVEIATYRK3	83689.4	52292.4	44890.4
P35280	P35280	RAB8A_RAT	Rab8a	Ras-related protein Rab-8A	1	LALDYGIK	LALDYGIK	2	LALDYGIK2	458975	401801	469106
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	LALEEGCGPGPGPPR	LALEEGC(UniMod:4)GPGPGPPR	2	LALEEGC(UniMod:4)GPGPGPPR2	21795.3	22623.1	24270.6
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	LALEGVEK	LALEGVEK	1	LALEGVEK1	8372.63	3303.49	2783.88
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	LALEGVEK	LALEGVEK	2	LALEGVEK2	963787	996166	1.00548e+06
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	LALEGVEKER	LALEGVEKER	2	LALEGVEKER2	16414.1	19914.6	15657.9
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	LALEGVEKER	LALEGVEKER	3	LALEGVEKER3	229237	239579	233058
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	LALENYITALQAVPPRPHHVFNMLK	LALENYITALQAVPPRPHHVFNMLK	4	LALENYITALQAVPPRPHHVFNMLK4	39655.7	28865.4	32267.6
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LALESICLLLGESTTDWK	LALESIC(UniMod:4)LLLGESTTDWK	3	LALESIC(UniMod:4)LLLGESTTDWK3	10221	12285.8	15762
B5DFF4	B5DFF4	B5DFF4_RAT	Vps37c	VPS37C subunit of ESCRT-I	1	LALESPEVQDLQLER	LALESPEVQDLQLER	2	LALESPEVQDLQLER2	8832.07	5698.5	8803.58
B5DFF4	B5DFF4	B5DFF4_RAT	Vps37c	VPS37C subunit of ESCRT-I	1	LALESPEVQDLQLER	LALESPEVQDLQLER	3	LALESPEVQDLQLER3	8917.05	2254.41	9760.65
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	LALETALMYGAK	LALETALMYGAK	2	LALETALMYGAK2	570170	469548	495368
Q5M7U6	Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	1	LALETTVLVESYTLPDGR	LALETTVLVESYTLPDGR	3	LALETTVLVESYTLPDGR3	59621.1	44673.4	56897.9
Q69BT7	Q69BT7	TPPC4_RAT	Trappc4	Trafficking protein particle complex subunit 4	1	LALEVAEK	LALEVAEK	2	LALEVAEK2	64143.9	57074	53776.5
Q3T1I9	Q3T1I9	RPAP1_RAT	Rpap1	RNA polymerase II-associated protein 1	1	LALFGEHVGVLR	LALFGEHVGVLR	3	LALFGEHVGVLR3	11028.1	8322.8	10497.3
B2RZD6	B2RZD6	B2RZD6_RAT	Ndufa4	NDUFA4, mitochondrial complex associated	1	LALFNPDVSWDR	LALFNPDVSWDR	2	LALFNPDVSWDR2	164408	149838	140292
B2RZD6	B2RZD6	B2RZD6_RAT	Ndufa4	NDUFA4, mitochondrial complex associated	1	LALFNPDVSWDRK	LALFNPDVSWDRK	2	LALFNPDVSWDRK2	7690.21	4252.74	5633.55
B2RZD6	B2RZD6	B2RZD6_RAT	Ndufa4	NDUFA4, mitochondrial complex associated	1	LALFNPDVSWDRK	LALFNPDVSWDRK	3	LALFNPDVSWDRK3	75816	77919.2	95083.1
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	LALFNSAILMQESGEVK	LALFNSAILMQESGEVK	2	LALFNSAILMQESGEVK2	4758.33	3669.29	6214.23
Q06880	Q06880	NBL1_RAT	Nbl1	Neuroblastoma suppressor of tumorigenicity 1	1	LALFPDK	LALFPDK	2	LALFPDK2	293706	225942	236446
A0A8I5ZXC8	A0A8I5ZXC8	A0A8I5ZXC8_RAT	Mrps16	Mitochondrial ribosomal protein S16	1	LALGGCTNRPFYR	LALGGC(UniMod:4)TNRPFYR	3	LALGGC(UniMod:4)TNRPFYR3	26578.6	24367.2	39482
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	LALGGLTEDKEK	LALGGLTEDKEK	2	LALGGLTEDKEK2	6756.5	3967.63	
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	LALGGLTEDKEK	LALGGLTEDKEK	3	LALGGLTEDKEK3	35064.8	55861.9	30835.6
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	LALGIPLPELR	LALGIPLPELR	2	LALGIPLPELR2	59705.9	66061.4	74721.4
B2RZ68	B2RZ68	B2RZ68_RAT	Dcaf7	DDB1 and CUL4 associated factor 7	1	LALGSFVEEYNNK	LALGSFVEEYNNK	2	LALGSFVEEYNNK2	6539.16	9633.9	8711.98
P29411	P29411	KAD3_RAT	Ak3	GTP:AMP phosphotransferase AK3, mitochondrial	1	LALHELK	LALHELK	2	LALHELK2	8765.57	3229.13	8045.13
P61972	P61972	NTF2_RAT	Nutf2	Nuclear transport factor 2	1	LALHNFG	LALHNFG	2	LALHNFG2	17105.6	15890	7330.64
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	LALHSGMDYAIMTGGDVAPMGR	LALHSGMDYAIMTGGDVAPMGR	3	LALHSGMDYAIMTGGDVAPMGR3	39279.8	22706.2	33582.8
Q6AYC0	Q6AYC0	Q6AYC0_RAT	Haus4	HAUS augmin-like complex, subunit 4	1	LALHTYEVLGEDFENLVK	LALHTYEVLGEDFENLVK	3	LALHTYEVLGEDFENLVK3	3250.89	3541.82	4107.9
P43527	P43527	CASP1_RAT	Casp1	Caspase-1	1	LALIICNTDFQHLSR	LALIIC(UniMod:4)NTDFQHLSR	3	LALIIC(UniMod:4)NTDFQHLSR3	10578	13001.8	
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	LALINRK	LALINRK	2	LALINRK2	4820.6	10428.7	6848.47
Q497B0	Q497B0	NIT2_RAT	Nit2	Omega-amidase NIT2	1	LALIQLQVSSIK	LALIQLQVSSIK	2	LALIQLQVSSIK2	44139	35214.4	38137.3
Q99P55	Q99P55	SGPP1_RAT	Sgpp1	Sphingosine-1-phosphate phosphatase 1	1	LALLAIR	LALLAIR	2	LALLAIR2	7966.63	10599.8	7735.6
D3ZSQ1	D3ZSQ1	D3ZSQ1_RAT	Pcnx3	Pecanex-like protein	1	LALLALLDR	LALLALLDR	2	LALLALLDR2	3472.08	2838.81	3583.11
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	LALLDNHSSEFNVTR	LALLDNHSSEFNVTR	3	LALLDNHSSEFNVTR3	63552.7	48959.3	69223.3
P97690	P97690	SMC3_RAT	Smc3	Structural maintenance of chromosomes protein 3	1	LALLHEGTGPR	LALLHEGTGPR	3	LALLHEGTGPR3	3545.82		3526.06
Q6QGW5	Q6QGW5	SRA1_RAT	Sra1	Steroid receptor RNA activator 1	1	LALLHEQWDGGK	LALLHEQWDGGK	3	LALLHEQWDGGK3	8227	3968.22	
A0A8I5ZNG4	A0A8I5ZNG4	A0A8I5ZNG4_RAT	Rictor	RPTOR independent companion of MTOR, complex 2	1	LALLNEAK	LALLNEAK	2	LALLNEAK2	6651.04	5545.31	5251.4
F1LTR1	F1LTR1	WDR26_RAT	Wdr26	WD repeat-containing protein 26	1	LALLNVATQGVHLWDLQDR	LALLNVATQGVHLWDLQDR	3	LALLNVATQGVHLWDLQDR3	24095.4	25346	29596.4
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	LALLQEER	LALLQEER	2	LALLQEER2	39972.4	32950.2	33514.4
P05708	M0R3X7;P05708	HXK1_RAT	Hk1	Hexokinase-1	0	LALLQVR	LALLQVR	2	LALLQVR2	535253	482624	522535
D3ZZL9	D3ZZL9	GCC2_RAT	Gcc2	GRIP and coiled-coil domain-containing protein 2	1	LALMFEIQGLK	LALMFEIQGLK	2	LALMFEIQGLK2	4474.82		
Q6QI44	Q6QI44	NAA25_RAT	Naa25	N-alpha-acetyltransferase 25, NatB auxiliary subunit	1	LALPADIR	LALPADIR	2	LALPADIR2	6429.83	7496.03	10782.8
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	LALPADSVNIK	LALPADSVNIK	2	LALPADSVNIK2	37096.8	27644.8	31882.9
Q99P99	Q99P99	HDAC4_RAT	Hdac4	Histone deacetylase 4	1	LALPALQQR	LALPALQQR	2	LALPALQQR2	18209.3	19367.3	17047.3
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	LALPGFSTPR	LALPGFSTPR	2	LALPGFSTPR2	230975	230334	252245
P08689	P08689	SHBG_RAT	Shbg	Sex hormone-binding globulin	1	LALPLAVGLPLQLK	LALPLAVGLPLQLK	2	LALPLAVGLPLQLK2	11251.6	7547.16	8555.54
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	LALQAQPVPDELVTK	LALQAQPVPDELVTK	2	LALQAQPVPDELVTK2	28291.6	26339.7	24879.7
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	LALQDAASGLQEQAVGWEDLATR	LALQDAASGLQEQAVGWEDLATR	3	LALQDAASGLQEQAVGWEDLATR3	33873	37066	47657.2
Q6TUG0	Q6TUG0	DJB11_RAT	Dnajb11	DnaJ homolog subfamily B member 11	1	LALQLHPDRNPDDPQAQEK	LALQLHPDRNPDDPQAQEK	3	LALQLHPDRNPDDPQAQEK3	53899.9	35748.5	33164.1
Q6TUG0	Q6TUG0	DJB11_RAT	Dnajb11	DnaJ homolog subfamily B member 11	1	LALQLHPDRNPDDPQAQEK	LALQLHPDRNPDDPQAQEK	4	LALQLHPDRNPDDPQAQEK4	290282	298307	272796
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	LALQSSSCLSLFR	LALQSSSC(UniMod:4)LSLFR	2	LALQSSSC(UniMod:4)LSLFR2	25331.9	10191.1	14183.7
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	LALQTSDWIR	LALQTSDWIR	2	LALQTSDWIR2	177281	211430	177870
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	LALQWHPDNFQSEEEK	LALQWHPDNFQSEEEK	3	LALQWHPDNFQSEEEK3	80140	70775.5	81797
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	LALQWHPDNFQSEEEKK	LALQWHPDNFQSEEEKK	3	LALQWHPDNFQSEEEKK3	11016.9	5887.59	
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	LALQWHPDNFQSEEEKK	LALQWHPDNFQSEEEKK	4	LALQWHPDNFQSEEEKK4	39458.9	31097.6	39217.7
A0A8I6A9R8	A0A8I6A9R8	A0A8I6A9R8_RAT	Cope	Coatomer subunit epsilon	1	LALQYAPSA	LALQYAPSA	1	LALQYAPSA1	72377	57668.5	64656.5
A0A8I6A9R8	A0A8I6A9R8	A0A8I6A9R8_RAT	Cope	Coatomer subunit epsilon	1	LALQYAPSA	LALQYAPSA	2	LALQYAPSA2	124435	101913	131205
P05544	P09006;A0A0G2JSK1;P05544;P05545	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	LALRNPDK	LALRNPDK	2	LALRNPDK2	14547.6	10251.9	18351.6
M0RCS2	M0RCS2	M0RCS2_RAT	Tbl2	Transducin (beta)-like 2	1	LALSPDTHVLALATGTSIHLFNTR	LALSPDTHVLALATGTSIHLFNTR	4	LALSPDTHVLALATGTSIHLFNTR4	3969.32	2745.91	
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	LALSVPTETFESMK	LALSVPTETFESMK	2	LALSVPTETFESMK2	109411	108485	103650
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	LALTEWLQEFGVPHQYSSR	LALTEWLQEFGVPHQYSSR	3	LALTEWLQEFGVPHQYSSR3	18999.6	16124.1	8921.94
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	LALVLHQLGR	LALVLHQLGR	2	LALVLHQLGR2		4544.99	3708.74
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	LALVNNLQIVDSK	LALVNNLQIVDSK	2	LALVNNLQIVDSK2	26575.9	35468.1	31905.8
D3ZL50	D3ZL50	D3ZL50_RAT	Skic3	Tetratricopeptide repeat domain 37	1	LALVSNTQPK	LALVSNTQPK	2	LALVSNTQPK2	2162.19	3659.62	10003.7
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	LALVTGGEIASTFDHPELVK	LALVTGGEIASTFDHPELVK	3	LALVTGGEIASTFDHPELVK3	317673	284818	314553
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	LALVYCSLIK	LALVYC(UniMod:4)SLIK	2	LALVYC(UniMod:4)SLIK2	41336.7	38818.1	31271.9
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	LAMAALQEK	LAMAALQEK	2	LAMAALQEK2	106481	101288	108482
D3Z8X6	D3Z8X6	D3Z8X6_RAT	Dtx3l	E3 ubiquitin-protein ligase	1	LAMDHETPMEVHR	LAMDHETPMEVHR	3	LAMDHETPMEVHR3	3010.03		2647.35
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	LAMELSAK	LAMELSAK	2	LAMELSAK2	70323.9	66060.6	66424.4
B2GV15	B2GV15	B2GV15_RAT	Dbt	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	LAMENNIK	LAMENNIK	2	LAMENNIK2	29074.3	15629.8	17995.9
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	LAMQEFMEINER	LAMQEFMEINER	2	LAMQEFMEINER2	8005.65	8336.33	2651.61
P04764	M0R5J4;P04764;A0A8I5YC61	ENOA_RAT	Eno1	Alpha-enolase	0	LAMQEFMILPVGASSFR	LAMQEFMILPVGASSFR	2	LAMQEFMILPVGASSFR2	156306	90960.5	458770
P04764	M0R5J4;P04764;A0A8I5YC61	ENOA_RAT	Eno1	Alpha-enolase	0	LAMQEFMILPVGASSFR	LAMQEFMILPVGASSFR	3	LAMQEFMILPVGASSFR3	172244	106847	127795
P32198	Q63704;P32198	CPT1A_RAT	Cpt1a	Carnitine O-palmitoyltransferase 1, liver isoform	0	LAMTGAGIDR	LAMTGAGIDR	2	LAMTGAGIDR2	46740.3	36522	36595.8
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	LAMTPTERPHGSDICTSWPR	LAMTPTERPHGSDIC(UniMod:4)TSWPR	3	LAMTPTERPHGSDIC(UniMod:4)TSWPR3	26285.5	24424.9	22557.5
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	LAMTPTERPHGSDICTSWPR	LAMTPTERPHGSDIC(UniMod:4)TSWPR	4	LAMTPTERPHGSDIC(UniMod:4)TSWPR4	32427.4	55956	36794.4
D3ZYR1	D3ZYR1	FCHO2_RAT	Fcho2	F-BAR domain only protein 2	1	LANCHLDLVR	LANC(UniMod:4)HLDLVR	3	LANC(UniMod:4)HLDLVR3	81496	80165.4	74094
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	LANDIEAAAVQAVR	LANDIEAAAVQAVR	2	LANDIEAAAVQAVR2	21473.5	31927.3	26083.4
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	LANDIEAAAVQAVR	LANDIEAAAVQAVR	3	LANDIEAAAVQAVR3	7543.53	9104.96	
A0A8I6A282	A0A8I6A282	A0A8I6A282_RAT	Antxr2	Anthrax toxin receptor	1	LANEQIQNAGGLK	LANEQIQNAGGLK	2	LANEQIQNAGGLK2	72959.8	70219.9	76049.9
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	LANIDEEMLQR	LANIDEEMLQR	2	LANIDEEMLQR2	52641.3	46785.7	43268
Q6TUD3	Q6TUD3	Q6TUD3_RAT	Rdh11	LRRGT00111	1	LANILFTK	LANILFTK	2	LANILFTK2	97883.3	89738	93855.2
D3ZUY0	D3ZUY0	D3ZUY0_RAT	Rdh14	Retinol dehydrogenase 14	1	LANILFTR	LANILFTR	2	LANILFTR2	11644.8	13762	13252.9
P43527	P43527	CASP1_RAT	Casp1	Caspase-1	1	LANITVMEK	LANITVMEK	2	LANITVMEK2	12494.5	10733.8	5651.49
O88277	O88277	FAT2_RAT	Fat2	Protocadherin Fat 2	1	LANLRFEK	LANLRFEK	2	LANLRFEK2	12754.3	10313.3	12912.9
P19999	P19999	MBL1_RAT	Mbl1	Mannose-binding protein A	1	LANMEAEINTLK	LANMEAEINTLK	2	LANMEAEINTLK2	343511	329540	333743
P19999	P19999	MBL1_RAT	Mbl1	Mannose-binding protein A	1	LANMEAEINTLK	LANMEAEINTLK	3	LANMEAEINTLK3	4145.44	5831.11	4993.84
A0A8I6ACK9	A0A8I6ACK9	A0A8I6ACK9_RAT	Abcg3l3	ATP-binding cassette, subfamily G (WHITE), member 3-like 3	1	LANMYAQSPLHSDTR	LANMYAQSPLHSDTR	3	LANMYAQSPLHSDTR3	5692.07	10796.5	13319.2
A0A8I6A0D0	A0A8I6A0D0	A0A8I6A0D0_RAT	Abcg3	ATP-binding cassette, subfamily G (WHITE), member 3	1	LANMYAQSR	LANMYAQSR	2	LANMYAQSR2	13787.7	8533.39	9571.39
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	LANQAADYFGDAFK	LANQAADYFGDAFK	2	LANQAADYFGDAFK2	55185.5	40322.5	47148.8
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	LANQAADYFGDAFK	LANQAADYFGDAFK	3	LANQAADYFGDAFK3	9975.89	6275.29	7286.43
B1WBW4	B1WBW4	ARM10_RAT	Armc10	Armadillo repeat-containing protein 10	1	LANQLPFAK	LANQLPFAK	2	LANQLPFAK2	49859.4	56479.6	50821.3
B1WBV4	B1WBV4	B1WBV4_RAT	Plekhf2	Pleckstrin homology and FYVE domain containing 2	1	LANSEANTR	LANSEANTR	2	LANSEANTR2			46098.8
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LANSEPVGTQTAK	LANSEPVGTQTAK	2	LANSEPVGTQTAK2	60731.7	53130.6	58752.7
A0A8I5ZTL9	D3ZUM7;A0A8I5ZVS1;A0A8I5ZTL9;F1M0C7;F1M059	A0A8I5ZTL9_RAT	LOC680825	Neurexophilin and PC-esterase domain family, member 5	0	LANTGYK	LANTGYK	2	LANTGYK2		98386.7	
P58366	P58366	ANKH_RAT	Ankh	Progressive ankylosis protein homolog	1	LANTNNTVTSAHIK	LANTNNTVTSAHIK	3	LANTNNTVTSAHIK3	5562.8	4512.03	3074.43
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	LANVMMGPYR	LANVMMGPYR	2	LANVMMGPYR2	1.07632e+06	719217	620716
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	LANVMMGPYR	LANVMMGPYR	3	LANVMMGPYR3	4964.76	4400.84	5005.11
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	LANVMMGPYRQDLLAK	LANVMMGPYRQDLLAK	3	LANVMMGPYRQDLLAK3	47372.2	55285.2	74881.6
A0A8I6AAA9	A0A8I6AAA9	A0A8I6AAA9_RAT	Lrch1	Leucine rich repeats and calponin homology domain containing 1	1	LAPAEGDFQPTPSLLGDSGSSGQER	LAPAEGDFQPTPSLLGDSGSSGQER	3	LAPAEGDFQPTPSLLGDSGSSGQER3	13364.2	20221.2	19628.2
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	LAPAYPAGLR	LAPAYPAGLR	2	LAPAYPAGLR2	60607.7	66664.6	80147.1
D4AAT1	D4AAT1	D4AAT1_RAT	Adamts8	ADAM metallopeptidase with thrombospondin type 1 motif, 8	1	LAPDASFLAPEFK	LAPDASFLAPEFK	2	LAPDASFLAPEFK2	45323.4	36608	39162.5
P56522	P56522	ADRO_RAT	Fdxr	NADPH:adrenodoxin oxidoreductase, mitochondrial	1	LAPDLSCDTAVILGQGNVALDVAR	LAPDLSC(UniMod:4)DTAVILGQGNVALDVAR	3	LAPDLSC(UniMod:4)DTAVILGQGNVALDVAR3	829.964		5684.23
P62752	F1LT35;P62752	RL23A_RAT	Rpl23a	Large ribosomal subunit protein uL23	0	LAPDYDALDVANK	LAPDYDALDVANK	2	LAPDYDALDVANK2	56422.1	59034.6	39582
O35244	A0A8I6ASU0;O35244	PRDX6_RAT	Prdx6	Peroxiredoxin-6	0	LAPEFAK	LAPEFAK	2	LAPEFAK2	80371.5	55682.3	65526.8
G3V8S9	G3V8S9	G3V8S9_RAT	Camp	Cathelicidin antimicrobial peptide	1	LAPEIEQ	LAPEIEQ	1	LAPEIEQ1	51204.8	32655.3	30458.9
G3V8S9	G3V8S9	G3V8S9_RAT	Camp	Cathelicidin antimicrobial peptide	1	LAPEIEQ	LAPEIEQ	2	LAPEIEQ2	13186.7	10360.8	20898.6
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	LAPEIITATQYK	LAPEIITATQYK	2	LAPEIITATQYK2	16293.5	17343.8	8771.65
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	LAPELSQLDR	LAPELSQLDR	2	LAPELSQLDR2	176937	184844	148133
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	LAPEYEAAATR	LAPEYEAAATR	2	LAPEYEAAATR2	855137	738616	936494
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	LAPEYEK	LAPEYEK	1	LAPEYEK1	57436	57157.4	66795.9
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	LAPEYEK	LAPEYEK	2	LAPEYEK2	2.9837e+06	3.27428e+06	3.28313e+06
Q498S0	Q498S0	Q498S0_RAT	Chst12	Carbohydrate sulfotransferase	1	LAPFNEHWR	LAPFNEHWR	2	LAPFNEHWR2	31227.2	31294.7	28481.4
Q498S0	Q498S0	Q498S0_RAT	Chst12	Carbohydrate sulfotransferase	1	LAPFNEHWR	LAPFNEHWR	3	LAPFNEHWR3	123977	113224	120852
Q4KLZ0	Q4KLZ0	Q4KLZ0_RAT	Vnn1	Vanin 1	1	LAPGEFQVLSDGR	LAPGEFQVLSDGR	2	LAPGEFQVLSDGR2	11934.6		7929.64
Q66H94	Q66H94	FKBP9_RAT	Fkbp9	Peptidyl-prolyl cis-trans isomerase FKBP9	1	LAPGFNAEMIVK	LAPGFNAEMIVK	2	LAPGFNAEMIVK2	54257.3	46597.1	27084.2
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	LAPGYDPDTVASPK	LAPGYDPDTVASPK	2	LAPGYDPDTVASPK2	6791.06		5271.13
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	LAPISEEGKPQLVGR	LAPISEEGKPQLVGR	3	LAPISEEGKPQLVGR3	47986.9	58492.2	37508.7
M0RD14	M0RD14	M0RD14_RAT	LOC100362738	Pyruvate kinase	1	LAPITSDPTEAAAVGAVEASFK	LAPITSDPTEAAAVGAVEASFK	3	LAPITSDPTEAAAVGAVEASFK3	170722	152402	165941
A0A8I6A1P8	A0A8I6A1P8	A0A8I6A1P8_RAT	Rac2	Rac family small GTPase 2	1	LAPITYPQGLALAK	LAPITYPQGLALAK	2	LAPITYPQGLALAK2	33098	53233.8	35839.1
A0A8I6A1P8	A0A8I6A1P8	A0A8I6A1P8_RAT	Rac2	Rac family small GTPase 2	1	LAPITYPQGLALAK	LAPITYPQGLALAK	3	LAPITYPQGLALAK3	3993.69	6257.16	7469.03
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	LAPLAEGVQEK	LAPLAEGVQEK	2	LAPLAEGVQEK2	5.53762e+07	5.28795e+07	5.02432e+07
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	LAPLAEGVQEK	LAPLAEGVQEK	3	LAPLAEGVQEK3	112443	109974	127175
P04182	P04182	OAT_RAT	Oat	Ornithine aminotransferase, mitochondrial	1	LAPPLVIKEDEIR	LAPPLVIKEDEIR	3	LAPPLVIKEDEIR3	6681.99		
P62944	P62944	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	1	LAPPLVTLLSGEPEVQYVALR	LAPPLVTLLSGEPEVQYVALR	3	LAPPLVTLLSGEPEVQYVALR3	17275.9	20717.5	11211
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	LAPSEYR	LAPSEYR	2	LAPSEYR2	486941	490025	538582
Q6AYD4	Q6AYD4	ESAM_RAT	Esam	Endothelial cell-selective adhesion molecule	1	LAPSSQVFFGPALDTVR	LAPSSQVFFGPALDTVR	2	LAPSSQVFFGPALDTVR2	349312	342860	347512
Q6AYD4	Q6AYD4	ESAM_RAT	Esam	Endothelial cell-selective adhesion molecule	1	LAPSSQVFFGPALDTVR	LAPSSQVFFGPALDTVR	3	LAPSSQVFFGPALDTVR3	22374.8	30401.6	42304.2
Q9EQS0	Q9EQS0	TALDO_RAT	Taldo1	Transaldolase	1	LAPTLSVK	LAPTLSVK	2	LAPTLSVK2	36587.6	27413	31352.7
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	LAQAAQSSVATITR	LAQAAQSSVATITR	2	LAQAAQSSVATITR2	1.87884e+06	1.87003e+06	2.11991e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	LAQAAQSSVATITR	LAQAAQSSVATITR	3	LAQAAQSSVATITR3	311655	359678	381952
A0A0G2JWA3	A0A0G2JWA3	A0A0G2JWA3_RAT	Xpo7	Exportin 7	1	LAQAGNEK	LAQAGNEK	1	LAQAGNEK1			563314
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	LAQALEPLLQESR	LAQALEPLLQESR	2	LAQALEPLLQESR2	485564	479070	566229
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	LAQALEPLLQESR	LAQALEPLLQESR	3	LAQALEPLLQESR3	90078.4	82675.3	97817.2
Q920F5	Q920F5	DCMC_RAT	Mlycd	Malonyl-CoA decarboxylase, mitochondrial	1	LAQALQGPLMR	LAQALQGPLMR	2	LAQALQGPLMR2	8356.48	4778.19	8353.51
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	LAQAWFNSHR	LAQAWFNSHR	2	LAQAWFNSHR2	15175.8	12057.8	13055.6
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	LAQAWFNSHR	LAQAWFNSHR	3	LAQAWFNSHR3	48757.4	46954.2	43052.6
B0BNI5	B0BNI5	OLFL3_RAT	Olfml3	Olfactomedin-like protein 3	1	LAQCQDQSSR	LAQC(UniMod:4)QDQSSR	2	LAQC(UniMod:4)QDQSSR2			15497.8
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	LAQCSSVTIR	LAQC(UniMod:4)SSVTIR	2	LAQC(UniMod:4)SSVTIR2	19008.3	16785.8	11643.8
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	LAQDFLDSQNLSAYNTR	LAQDFLDSQNLSAYNTR	2	LAQDFLDSQNLSAYNTR2	8503.06	4763.46	4218.81
Q66H12	Q66H12	NAGAB_RAT	Naga	Alpha-N-acetylgalactosaminidase	1	LAQDGWR	LAQDGWR	2	LAQDGWR2	41876.1	46679.9	47072.7
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	LAQDPEGIR	LAQDPEGIR	2	LAQDPEGIR2	187285	174047	201590
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	LAQDPEGIRK	LAQDPEGIRK	2	LAQDPEGIRK2	98488.3	71799	88022.5
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	LAQDPFPLYPGEVLEK	LAQDPFPLYPGEVLEK	2	LAQDPFPLYPGEVLEK2	89929.2	63712.7	87274.4
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	LAQDPFPLYPGEVLEK	LAQDPFPLYPGEVLEK	3	LAQDPFPLYPGEVLEK3	23208	26770.1	41043.4
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	LAQDWFPLLELLAMALNPHCK	LAQDWFPLLELLAMALNPHC(UniMod:4)K	3	LAQDWFPLLELLAMALNPHC(UniMod:4)K3	6747.14		
A0A096MKD1	A0A096MKD1	A0A096MKD1_RAT	Eef1akmt1	EEF1A lysine methyltransferase 1	1	LAQEAINAVGEGGR	LAQEAINAVGEGGR	2	LAQEAINAVGEGGR2	12556.5	12577.4	7167.93
P04762	P04762	CATA_RAT	Cat	Catalase	1	LAQEDPDYGLR	LAQEDPDYGLR	2	LAQEDPDYGLR2	7076.7	1737.28	1791.09
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	LAQEDTPPETDYR	LAQEDTPPETDYR	2	LAQEDTPPETDYR2	3810.33	4773.97	16614.9
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	LAQEQGGSDNSLLVR	LAQEQGGSDNSLLVR	2	LAQEQGGSDNSLLVR2	18261	23258.1	12385.8
P41565	P41565	IDHG1_RAT	Idh3g	Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial	1	LAQESGR	LAQESGR	2	LAQESGR2			18898.6
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	LAQESLK	LAQESLK	2	LAQESLK2	1.0857e+06	1.2217e+06	1.23891e+06
Q29RW1	Q29RW1	MYH4_RAT	Myh4	Myosin-4	1	LAQESTMDIENDK	LAQESTMDIENDK	2	LAQESTMDIENDK2	5298.84	4085.61	5587.26
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	LAQEYSK	LAQEYSK	2	LAQEYSK2	567687	1.51672e+06	1.15418e+06
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LAQFVEHWK	LAQFVEHWK	2	LAQFVEHWK2	132328	133504	132425
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LAQFVEHWK	LAQFVEHWK	3	LAQFVEHWK3	541184	524104	525954
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	LAQFVQHWEK	LAQFVQHWEK	3	LAQFVQHWEK3	25857.7	16185.5	26132.9
P18163	O88813;P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	0	LAQGEYIAPEK	LAQGEYIAPEK	2	LAQGEYIAPEK2	105552	109444	107852
Q920F5	Q920F5	DCMC_RAT	Mlycd	Malonyl-CoA decarboxylase, mitochondrial	1	LAQGFGVDHGQVAEQSAGVLQLR	LAQGFGVDHGQVAEQSAGVLQLR	3	LAQGFGVDHGQVAEQSAGVLQLR3	5445.24	3515.35	1660.35
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	LAQGISQLDK	LAQGISQLDK	2	LAQGISQLDK2	13523.4	15404.6	
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	LAQGISQLDKELHLQVVAR	LAQGISQLDKELHLQVVAR	3	LAQGISQLDKELHLQVVAR3	3661.39	6418.24	4697.55
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	LAQGISQLDKELHLQVVAR	LAQGISQLDKELHLQVVAR	4	LAQGISQLDKELHLQVVAR4	5040.6	5518.41	6807.14
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	LAQGLTHLGK	LAQGLTHLGK	2	LAQGLTHLGK2	24565.8	33624.1	49167.5
Q5PQL3	Q5PQL3	SPP2B_RAT	Sppl2b	Signal peptide peptidase-like 2B	1	LAQGSGAHGLLIVSK	LAQGSGAHGLLIVSK	3	LAQGSGAHGLLIVSK3	15584.3	10406.3	6646.15
A0A8I6AIV4	A0A8I6AIV4	A0A8I6AIV4_RAT	Dctn3l1	Dynactin 3-like 1	1	LAQIHIQQQDQCVEITEESK	LAQIHIQQQDQC(UniMod:4)VEITEESK	3	LAQIHIQQQDQC(UniMod:4)VEITEESK3	24390.9	22754.5	22538.9
Q68SB1	Q68SB1	STAU2_RAT	Stau2	Double-stranded RNA-binding protein Staufen homolog 2	1	LAQIQQAR	LAQIQQAR	2	LAQIQQAR2	4601.36	2554.01	3174.04
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	LAQKVPTANLEDVLPLAEDLTEILSR	LAQKVPTANLEDVLPLAEDLTEILSR	3	LAQKVPTANLEDVLPLAEDLTEILSR3	5347.8		
Q5FWT9	Q5FWT9	SIKE1_RAT	Sike1	Suppressor of IKBKE 1	1	LAQLELENK	LAQLELENK	2	LAQLELENK2	60664.1	53523.6	39826.5
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	LAQLFIK	LAQLFIK	2	LAQLFIK2	191246	176108	176874
Q29RW1	Q29RW1	MYH4_RAT	Myh4	Myosin-4	1	LAQLITR	LAQLITR	2	LAQLITR2	9762.05	8709.23	3538.86
Q6J1Y9	Q6J1Y9	UBP19_RAT	Usp19	Ubiquitin carboxyl-terminal hydrolase 19	1	LAQLLEGYAR	LAQLLEGYAR	2	LAQLLEGYAR2	6764.42	5256.33	7728.13
D3Z9D0	D3Z9D0	D3Z9D0_RAT	RGD1306271	Similar to KIAA1549 protein	1	LAQLLSEVPTR	LAQLLSEVPTR	2	LAQLLSEVPTR2	14117.6	15351.8	15634.6
D3Z9D0	D3Z9D0	D3Z9D0_RAT	RGD1306271	Similar to KIAA1549 protein	1	LAQLLSEVPTRR	LAQLLSEVPTRR	3	LAQLLSEVPTRR3	16519.2	12888.9	11252.2
Q63615	Q63615	VP33A_RAT	Vps33a	Vacuolar protein sorting-associated protein 33A	1	LAQLLSR	LAQLLSR	2	LAQLLSR2	18334.3	12061.3	17772.3
Q6TMG5	Q6TMG5	NEMO_RAT	Ikbkg	NF-kappa-B essential modulator	1	LAQLQAAYHQLFQDYDSHIK	LAQLQAAYHQLFQDYDSHIK	4	LAQLQAAYHQLFQDYDSHIK4	8408.52	3336.02	8533.02
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	LAQLQQSSK	LAQLQQSSK	2	LAQLQQSSK2	15746	29626.3	18596
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	LAQLTTATLTK	LAQLTTATLTK	2	LAQLTTATLTK2	52426.7	75865.4	60394.1
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	LAQLVEK	LAQLVEK	2	LAQLVEK2	55279	42588.1	57870.7
A0A8I5Y1D5	A0A8I5Y1D5	A0A8I5Y1D5_RAT	Mtmr1	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	LAQMEEAPLFPGESIK	LAQMEEAPLFPGESIK	2	LAQMEEAPLFPGESIK2	5190.17	4034.91	
A0A8I6ACU2	A0A8I6ACU2	A0A8I6ACU2_RAT	Ubap2l	Ubiquitin associated protein 2-like	1	LAQMISDHNDADFEEK	LAQMISDHNDADFEEK	3	LAQMISDHNDADFEEK3	5593.29	10746.9	9114.59
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	LAQNIDVK	LAQNIDVK	1	LAQNIDVK1	916.746	1494.13	330.739
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	LAQNIDVK	LAQNIDVK	2	LAQNIDVK2	449215	499537	499896
Q5QJC9	Q5QJC9	BAG5_RAT	Bag5	BAG family molecular chaperone regulator 5	1	LAQNILSYLDMK	LAQNILSYLDMK	2	LAQNILSYLDMK2	12702.4	9474.86	14942.6
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	LAQNYELKPILQR	LAQNYELKPILQR	2	LAQNYELKPILQR2	12006.4	10443.7	8649.33
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	LAQNYELKPILQR	LAQNYELKPILQR	3	LAQNYELKPILQR3	126054	130767	139705
Q5RKJ1	Q5RKJ1	MAEA_RAT	Maea	E3 ubiquitin-protein transferase MAEA	1	LAQPLPMAHCANSR	LAQPLPMAHC(UniMod:4)ANSR	3	LAQPLPMAHC(UniMod:4)ANSR3	9463.97	3715.98	9821.74
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	LAQPPSLVVDSHDAGVYQQPLK	LAQPPSLVVDSHDAGVYQQPLK	3	LAQPPSLVVDSHDAGVYQQPLK3	19752.3		13022.6
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	LAQPYVGVFLK	LAQPYVGVFLK	2	LAQPYVGVFLK2	70428.6	52163.9	59794.5
A0A8I5ZVY6	A0A8I5ZVY6	A0A8I5ZVY6_RAT	Rint1	RAD50 interactor 1	1	LAQQDVEILLNLR	LAQQDVEILLNLR	2	LAQQDVEILLNLR2	3842.85	164.129	2116.05
D3ZNF4	D3ZNF4	D3ZNF4_RAT	Tbl1xr1	TBL1X receptor 1	1	LAQQHAAAAAAAAAATNQQGSAK	LAQQHAAAAAAAAAATNQQGSAK	3	LAQQHAAAAAAAAAATNQQGSAK3	6609.07	3282.1	6768.79
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	LAQQISDEASR	LAQQISDEASR	2	LAQQISDEASR2	219903	269126	226664
A0A8I5ZXD6	D4A5F0;A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	0	LAQQLTAER	LAQQLTAER	2	LAQQLTAER2	49284.3	50872.1	40662.1
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	LAQQNAVTSLSEDCK	LAQQNAVTSLSEDC(UniMod:4)K	2	LAQQNAVTSLSEDC(UniMod:4)K2	5271.84	6529.77	4797.96
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	LAQQNAVTSLSEDCK	LAQQNAVTSLSEDC(UniMod:4)K	3	LAQQNAVTSLSEDC(UniMod:4)K3	7058.67	8542.26	8905.1
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	LAQQNAVTSLSEDCKR	LAQQNAVTSLSEDC(UniMod:4)KR	3	LAQQNAVTSLSEDC(UniMod:4)KR3	23201.5	20796.3	33952.4
A0A8I6A8Y6	A0A8I6A8Y6	A0A8I6A8Y6_RAT	Sf3b2	Splicing factor 3b, subunit 2	1	LAQQQAALLMQQEER	LAQQQAALLMQQEER	2	LAQQQAALLMQQEER2	2445.25	5983.79	4511.74
P17220	P17220	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	1	LAQQYYLVYQEPIPTAQLVQR	LAQQYYLVYQEPIPTAQLVQR	3	LAQQYYLVYQEPIPTAQLVQR3	4.12094e+06	3.98937e+06	3.72643e+06
P17220	P17220	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	1	LAQQYYLVYQEPIPTAQLVQR	LAQQYYLVYQEPIPTAQLVQR	4	LAQQYYLVYQEPIPTAQLVQR4	27908.5	26202.3	30846.6
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	LAQSEYQLLMGIIPEHHQK	LAQSEYQLLMGIIPEHHQK	4	LAQSEYQLLMGIIPEHHQK4	12880.8	11998.8	6961.26
P04764	M0R5J4;P15429;P04764;A0A8I5YC61;F1M9V3	ENOA_RAT	Eno1	Alpha-enolase	0	LAQSNGWGVMVSHR	LAQSNGWGVMVSHR	2	LAQSNGWGVMVSHR2	9036.98	7181.53	7885.1
P04764	M0R5J4;P15429;P04764;A0A8I5YC61;F1M9V3	ENOA_RAT	Eno1	Alpha-enolase	0	LAQSNGWGVMVSHR	LAQSNGWGVMVSHR	3	LAQSNGWGVMVSHR3	45822.7	73696.7	87711.7
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	LAQSPHVK	LAQSPHVK	2	LAQSPHVK2			5345.77
E9PTK4	E9PTK4	E9PTK4_RAT	Thnsl1	Threonine synthase-like 1	1	LAQTFSPSINILK	LAQTFSPSINILK	2	LAQTFSPSINILK2	1968.45		5718.6
Q9JHU5	Q9JHU5	ARFP1_RAT	Arfip1	Arfaptin-1	1	LAQTLSTQLFQMVHTQK	LAQTLSTQLFQMVHTQK	3	LAQTLSTQLFQMVHTQK3	23653	22475.2	19654.9
Q99N37	Q99N37	RHG17_RAT	Arhgap17	Rho GTPase-activating protein 17	1	LAQTSDVNK	LAQTSDVNK	2	LAQTSDVNK2			4128.77
A0A8I6G1H3	A0A8I6G1H3	A0A8I6G1H3_RAT	Irak4	Interleukin-1 receptor-associated kinase 4	1	LAQTVMTSR	LAQTVMTSR	2	LAQTVMTSR2	7732.2		4095.92
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	LAQVFQSK	LAQVFQSK	2	LAQVFQSK2	75413.8	83900.4	83133.6
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	LAQVFSDMISK	LAQVFSDMISK	2	LAQVFSDMISK2	91956	116049	97057.6
Q8CHI9	Q8CHI9	CHSTF_RAT	Chst15	Carbohydrate sulfotransferase 15	1	LAQVLDDEAFAWK	LAQVLDDEAFAWK	2	LAQVLDDEAFAWK2	26676.9	20612	36664.2
A0A8I6AHQ9	A0A8I6AHQ9	A0A8I6AHQ9_RAT	Xpot	Exportin-T	1	LAQVSPELVLASVR	LAQVSPELVLASVR	2	LAQVSPELVLASVR2	15366.8	12100.3	13354
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	LAQVVDDGAFTAGLAQVSFDK	LAQVVDDGAFTAGLAQVSFDK	3	LAQVVDDGAFTAGLAQVSFDK3	10183.8	10615.5	6899.63
P04905	P04905	GSTM1_RAT	Gstm1	Glutathione S-transferase Mu 1	1	LAQWSNK	LAQWSNK	2	LAQWSNK2	27132.9	28599.2	22686.9
B5DEN5	B5DEN5	B5DEN5_RAT	Eef1b2	Elongation factor 1-beta	1	LAQYESK	LAQYESK	1	LAQYESK1	4701.47	16536.8	9675.39
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	LARDEGWLAEHMLILGITNPAGK	LARDEGWLAEHMLILGITNPAGK	4	LARDEGWLAEHMLILGITNPAGK4	6294.61	8954.85	9393.29
D4A731	D4A731	D4A731_RAT	Ankib1	RBR-type E3 ubiquitin transferase	1	LARPVEDDFR	LARPVEDDFR	3	LARPVEDDFR3	14908.3	13037.9	15423
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	LASAAYPDPSK	LASAAYPDPSK	2	LASAAYPDPSK2	9931.33	7859.42	8822.26
Q29RW1	P02563;P02564;P12847;A0A8I6AIQ9;Q29RW1	MYH4_RAT	Myh4	Myosin-4	0	LASADIETYLLEK	LASADIETYLLEK	2	LASADIETYLLEK2	4808.01		1273.03
B2RYN0	B2RYN0	B2RYN0_RAT	Pgm3	Phosphoacetylglucosamine mutase	1	LASAEEQDLPK	LASAEEQDLPK	2	LASAEEQDLPK2	5666.12	4449.91	9624.38
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	LASALDLPLLR	LASALDLPLLR	2	LASALDLPLLR2	66270.5	64352.7	50222.5
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	LASAMLSQSLDLSEKPR	LASAMLSQSLDLSEKPR	3	LASAMLSQSLDLSEKPR3	44890.3	41583.2	27292.2
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	LASAYGATELQGYCGR	LASAYGATELQGYC(UniMod:4)GR	2	LASAYGATELQGYC(UniMod:4)GR2	256329	256808	249847
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	LASAYGATELQGYCGR	LASAYGATELQGYC(UniMod:4)GR	3	LASAYGATELQGYC(UniMod:4)GR3	55693.8	72163.8	96533.9
F1M6V8	F1M6V8	F1M6V8_RAT	Strn4	Striatin 4	1	LASCSADGTIR	LASC(UniMod:4)SADGTIR	2	LASC(UniMod:4)SADGTIR2	21132.4	23166.8	16881.5
Q5M7T1	Q5M7T1	CIAO1_RAT	Ciao1	Probable cytosolic iron-sulfur protein assembly protein CIAO1	1	LASCSDDR	LASC(UniMod:4)SDDR	2	LASC(UniMod:4)SDDR2			14229.6
Q5PPJ9	Q5PPJ9	SHLB2_RAT	Sh3glb2	Endophilin-B2	1	LASDAGIFFTR	LASDAGIFFTR	2	LASDAGIFFTR2	16950.5	36256.3	30388.3
Q9EQT5	Q9EQT5	TINAL_RAT	Tinagl1	Tubulointerstitial nephritis antigen-like	1	LASDEKEIMK	LASDEKEIMK	3	LASDEKEIMK3		3603.87	8470.15
Q9Z1P2	Q9QXQ0;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	LASDLLEWIR	LASDLLEWIR	2	LASDLLEWIR2	3.99903e+06	4.89024e+06	4.95272e+06
Q9Z1P2	Q9QXQ0;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	LASDLLEWIR	LASDLLEWIR	3	LASDLLEWIR3	28761.4	32598.3	11254
Q9Z1P2	Q9QXQ0;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	LASDLLEWIRR	LASDLLEWIRR	3	LASDLLEWIRR3	126772	180498	177956
Q9WTV5	Q9WTV5	PSMD9_RAT	Psmd9	26S proteasome non-ATPase regulatory subunit 9	1	LASDSPALPK	LASDSPALPK	2	LASDSPALPK2	45680.7	45477.9	32721.3
P15589	P15589	STS_RAT	Sts	Steryl-sulfatase	1	LASEAGDFLR	LASEAGDFLR	2	LASEAGDFLR2	5793.01	7832.43	14525
Q641X8	Q641X8;A0A0G2K273	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	0	LASEILMQNWDAAMEDLTR	LASEILMQNWDAAMEDLTR	3	LASEILMQNWDAAMEDLTR3	17692	13132	19022
Q76MX4	Q76MX4	MAFG_RAT	Mafg	Transcription factor MafG	1	LASENASMK	LASENASMK	2	LASENASMK2	9187.63	10987	
A0A8I5ZRG3	A0A8I5ZRG3	A0A8I5ZRG3_RAT	Frmd4b	FERM domain containing 4B	1	LASEPDLCK	LASEPDLC(UniMod:4)K	2	LASEPDLC(UniMod:4)K2	48771.7	46470.6	34644.7
Q80Z70	Q80Z70	SE1L1_RAT	Sel1l	Protein sel-1 homolog 1	1	LASEQQHSAQAMFNLGYMHEK	LASEQQHSAQAMFNLGYMHEK	4	LASEQQHSAQAMFNLGYMHEK4		10809	16160.4
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	LASEYNWGGAEPSDK	LASEYNWGGAEPSDK	2	LASEYNWGGAEPSDK2	28655.1	23342.2	25958.8
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	LASFYEMAIPEIESAIKK	LASFYEMAIPEIESAIKK	3	LASFYEMAIPEIESAIKK3	20747.7	18107.2	14423.5
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	LASFYER	LASFYER	2	LASFYER2	103527	82835.1	93201
Q62825	Q62825	EXOC3_RAT	Exoc3	Exocyst complex component 3	1	LASGFGEDADGHCDTIVAVAEVIK	LASGFGEDADGHC(UniMod:4)DTIVAVAEVIK	3	LASGFGEDADGHC(UniMod:4)DTIVAVAEVIK3	5544.01	14603.6	7231.26
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	LASGGDPTYAFNIR	LASGGDPTYAFNIR	2	LASGGDPTYAFNIR2	13203.7	4082.61	7552.28
P21571	P21571	ATP5J_RAT	Atp5pf	ATP synthase-coupling factor 6, mitochondrial	1	LASGGPVDTGPEYQQEVDR	LASGGPVDTGPEYQQEVDR	3	LASGGPVDTGPEYQQEVDR3	23630.9	27933.3	25725.5
P21571	P21571	ATP5J_RAT	Atp5pf	ATP synthase-coupling factor 6, mitochondrial	1	LASGGPVDTGPEYQQEVDRELFK	LASGGPVDTGPEYQQEVDRELFK	3	LASGGPVDTGPEYQQEVDRELFK3	336882	432361	434795
F7EXP7	F7EXP7	F7EXP7_RAT	Snx7	Sorting nexin 7	1	LASGSSELAVGESPR	LASGSSELAVGESPR	2	LASGSSELAVGESPR2	2113.06	2713.49	
A0A8I5ZNK2	A0A8I5ZNK2	A0A8I5ZNK2_RAT	Oxsr1	non-specific serine/threonine protein kinase	1	LASGVEGSDIPDDGK	LASGVEGSDIPDDGK	2	LASGVEGSDIPDDGK2	34108.1	25038.3	31859.6
A0A8I6GF53	M0R838;A0A8I5ZLW7;A0A8I6GF53;A0A8I6AJM2;A0A8I5ZMT8	A0A8I6GF53_RAT	ENSRNOG00000067934	Ig-like domain-containing protein	0	LASGVPDR	LASGVPDR	2	LASGVPDR2	1.08221e+06	923659	924952
A0A8I5ZM48	A0A8I5ZXJ9;A0A8I6ACW2;A0A8I5ZM48	A0A8I5ZM48_RAT	ENSRNOG00000062392	Ig-like domain-containing protein	0	LASGVPNR	LASGVPNR	2	LASGVPNR2	839280	630281	660002
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	LASHLNLAMCHLK	LASHLNLAMC(UniMod:4)HLK	3	LASHLNLAMC(UniMod:4)HLK3	7524.27	3987.03	5436.96
D3ZAW2	D3ZAW2	PISD_RAT	Pisd	Phosphatidylserine decarboxylase proenzyme, mitochondrial	1	LASHWEVSLYK	LASHWEVSLYK	3	LASHWEVSLYK3		2851.47	
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	LASIDEK	LASIDEK	2	LASIDEK2	200637	223078	232301
O35977	O35977	O35977_RAT	Gfra2	GDNF family receptor alpha-2	1	LASIFSGTGTDPAVSTK	LASIFSGTGTDPAVSTK	2	LASIFSGTGTDPAVSTK2	32397.9	25196.4	31725.8
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	LASIIGVK	LASIIGVK	2	LASIIGVK2	59090.7	63160.7	56624.9
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	LASIVEQVSVLQNQGR	LASIVEQVSVLQNQGR	2	LASIVEQVSVLQNQGR2	15279.9	19421.2	16825.7
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	LASIVEQVSVLQNQGR	LASIVEQVSVLQNQGR	3	LASIVEQVSVLQNQGR3	90936.5	99033.4	
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	LASIYEK	LASIYEK	2	LASIYEK2			35779.6
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	LASIYEKEEDWR	LASIYEKEEDWR	2	LASIYEKEEDWR2	3734.12	3850.5	4184.76
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	LASIYEKEEDWR	LASIYEKEEDWR	3	LASIYEKEEDWR3	146720	118813	160363
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	LASLDAGLHQLHIR	LASLDAGLHQLHIR	4	LASLDAGLHQLHIR4	4668.01	4154.63	2205.1
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	LASLFGLDQASVGHGNEFFQYTAPK	LASLFGLDQASVGHGNEFFQYTAPK	3	LASLFGLDQASVGHGNEFFQYTAPK3	2601.75		
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LASLNQR	LASLNQR	2	LASLNQR2	387366	435262	385312
D4AEK9	D4AEK9	D4AEK9_RAT	Ccdc6	Coiled-coil domain containing 6	1	LASLQQENK	LASLQQENK	2	LASLQQENK2	93866.1	81983.7	79137
P31399	P31399	ATP5H_RAT	Atp5pd	ATP synthase subunit d, mitochondrial	1	LASLSEKPPAIDWAYYR	LASLSEKPPAIDWAYYR	3	LASLSEKPPAIDWAYYR3	365051	329424	334911
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	LASLSSHAAELEEDLDTAR	LASLSSHAAELEEDLDTAR	3	LASLSSHAAELEEDLDTAR3	37303.7	28830.6	26053.6
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	LASLSSHAAELEEDLDTARK	LASLSSHAAELEEDLDTARK	3	LASLSSHAAELEEDLDTARK3	19801.9	10867.3	21277
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	LASLSSHAAELEEDLDTARK	LASLSSHAAELEEDLDTARK	4	LASLSSHAAELEEDLDTARK4	17630.9	22716.1	19313.2
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	LASLTAPVGEK	LASLTAPVGEK	2	LASLTAPVGEK2	52062.6	53182.1	57728.5
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	LASLTLSHNAITHLPENVFR	LASLTLSHNAITHLPENVFR	3	LASLTLSHNAITHLPENVFR3	1.69098e+06	1.23142e+06	1.25905e+06
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	LASLTLSHNAITHLPENVFR	LASLTLSHNAITHLPENVFR	4	LASLTLSHNAITHLPENVFR4	4.21315e+06	3.15678e+06	3.00404e+06
F1LN92	F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	1	LASLTPGFSGADVANVCNEAALIAAR	LASLTPGFSGADVANVC(UniMod:4)NEAALIAAR	3	LASLTPGFSGADVANVC(UniMod:4)NEAALIAAR3	6618.78	7613.68	2983.89
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	LASMQLDYR	LASMQLDYR	2	LASMQLDYR2	21237.8	28220.1	26240.2
Q08851	Q08851	STX5_RAT	Stx5	Syntaxin-5	1	LASMSNDFK	LASMSNDFK	2	LASMSNDFK2	27794.6	24708.1	27310.1
Q9JMK8	Q9JMK8	VPS54_RAT	Vps54	Vacuolar protein sorting-associated protein 54	1	LASNIQELLCNASDVCHDR	LASNIQELLC(UniMod:4)NASDVC(UniMod:4)HDR	3	LASNIQELLC(UniMod:4)NASDVC(UniMod:4)HDR3	2222.34	1889.33	2216.55
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	LASPLNCGAWDK	LASPLNC(UniMod:4)GAWDK	2	LASPLNC(UniMod:4)GAWDK2	6926.53	8363.82	3540.37
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	LASPNLSR	LASPNLSR	2	LASPNLSR2	238245	226347	237227
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	LASQAKPAAVAAENEEIGAHIK	LASQAKPAAVAAENEEIGAHIK	3	LASQAKPAAVAAENEEIGAHIK3	17463.5	22790	30242.2
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	LASQAKPAAVAAENEEIGAHIK	LASQAKPAAVAAENEEIGAHIK	4	LASQAKPAAVAAENEEIGAHIK4	144921	192061	208564
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	LASQALEPMVLR	LASQALEPMVLR	2	LASQALEPMVLR2	10728.5	7487.71	12676.2
P62944	P52303;P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	LASQANIAQVLAELK	LASQANIAQVLAELK	2	LASQANIAQVLAELK2	30936.9	30734.3	34512.1
P62944	P52303;P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	LASQANIAQVLAELK	LASQANIAQVLAELK	3	LASQANIAQVLAELK3	18838.4	17400.6	21810.6
P62944	P52303;P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	LASQANIAQVLAELKEYATEVDVDFVRK	LASQANIAQVLAELKEYATEVDVDFVRK	4	LASQANIAQVLAELKEYATEVDVDFVRK4			6189.18
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	LASQCMALK	LASQC(UniMod:4)MALK	2	LASQC(UniMod:4)MALK2	51223.1	37102.6	38135.5
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	LASQLGVYR	LASQLGVYR	2	LASQLGVYR2	32179.1	33793	34971
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	LASQNVSR	LASQNVSR	2	LASQNVSR2			20924.9
D3ZF26	D3ZF26	D3ZF26_RAT	Tnks1bp1	Tankyrase 1 binding protein 1	1	LASSGPPSEVSK	LASSGPPSEVSK	2	LASSGPPSEVSK2	4311.18	2993.75	1435.32
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	LASTGSGQSFLAR	LASTGSGQSFLAR	2	LASTGSGQSFLAR2	34424.7	30969.6	27727.5
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	LASTLTTK	LASTLTTK	2	LASTLTTK2		610820	777498
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	LASTLVHLGEYQAAVDGAR	LASTLVHLGEYQAAVDGAR	3	LASTLVHLGEYQAAVDGAR3	1.08319e+06	1.11952e+06	1.18616e+06
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	LASTLVHLGEYQAAVDGAR	LASTLVHLGEYQAAVDGAR	4	LASTLVHLGEYQAAVDGAR4	18734.8	33610.3	25200.9
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	LASTSCSQK	LASTSC(UniMod:4)SQK	2	LASTSC(UniMod:4)SQK2			41161.7
Q9ESS6	Q9ESS6	BCAM_RAT	Bcam	Basal cell adhesion molecule	1	LASVEPQGSEFLGTIHNSR	LASVEPQGSEFLGTIHNSR	3	LASVEPQGSEFLGTIHNSR3	16021.4		5934.93
A0A8I6GFC7	A0A8I6GFC7	A0A8I6GFC7_RAT	Ubp1	Upstream binding protein 1	1	LASVFNIPFHQINQVYR	LASVFNIPFHQINQVYR	3	LASVFNIPFHQINQVYR3	21327.1	19040.6	16480.8
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	LASVLNTEPALDSELTSK	LASVLNTEPALDSELTSK	2	LASVLNTEPALDSELTSK2	13365.9	9588.22	4902.73
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	LASVLNTEPALDSELTSK	LASVLNTEPALDSELTSK	3	LASVLNTEPALDSELTSK3	8351.92	8089.45	8190.74
Q6IFU8	A0A8I6A244;Q6IFV3;Q63279;Q6IFU8;Q5BJY9	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	0	LASYLDK	LASYLDK	1	LASYLDK1	137180	138531	91022.8
Q6IFU8	A0A8I6A244;Q6IFV3;Q63279;Q6IFU8;Q5BJY9	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	0	LASYLDK	LASYLDK	2	LASYLDK2	1.0804e+07	1.05204e+07	9.81039e+06
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	LATALALVGDPAVVFLDEPTTGMDPSAR	LATALALVGDPAVVFLDEPTTGMDPSAR	3	LATALALVGDPAVVFLDEPTTGMDPSAR3	4624.79	1915.4	5772.31
Q63610	Q63610;A0A8I5ZZ16;P58775;P09495;P04692	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	0	LATALQK	LATALQK	1	LATALQK1	322487	237614	229052
Q9QYF3	Q9QYF3	MYO5A_RAT	Myo5a	Unconventional myosin-Va	1	LATATETYIKPISK	LATATETYIKPISK	3	LATATETYIKPISK3	4033.05	9219.54	7355.06
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	LATATFAGIENK	LATATFAGIENK	2	LATATFAGIENK2	43384	40852.4	40277.7
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	LATAVEIWR	LATAVEIWR	2	LATAVEIWR2	56370.6	57691.3	49589.4
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LATAVSLTNK	LATAVSLTNK	2	LATAVSLTNK2	1.0881e+06	1.35214e+06	1.15742e+06
Q5XFW8	Q5XFW8	SEC13_RAT	Sec13	Protein SEC13 homolog	1	LATCSSDR	LATC(UniMod:4)SSDR	2	LATC(UniMod:4)SSDR2			16983.6
P02770	P02770	ALBU_RAT	Alb	Albumin	1	LATDVTK	LATDVTK	1	LATDVTK1	310598	245094	235250
A0A8I6AS17	A0A8I6AS17	A0A8I6AS17_RAT	Bsdc1	BSD domain containing 1	1	LATEGSSGATEK	LATEGSSGATEK	2	LATEGSSGATEK2	7443.66		11311.9
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	LATELPDAELRR	LATELPDAELRR	3	LATELPDAELRR3	29399.5	31363.3	25501.1
B5DEY9	B5DEY9	B5DEY9_RAT	Csgalnact1	Hexosyltransferase	1	LATEYAAVPFDSFTLQK	LATEYAAVPFDSFTLQK	2	LATEYAAVPFDSFTLQK2	15003.1	10676.9	17196
Q6PDU7	Q6PDU7	ATP5L_RAT	Atp5mg	ATP synthase subunit g, mitochondrial	1	LATFWHYAR	LATFWHYAR	2	LATFWHYAR2	43701.3	41817	37577.6
Q6PDU7	Q6PDU7	ATP5L_RAT	Atp5mg	ATP synthase subunit g, mitochondrial	1	LATFWHYAR	LATFWHYAR	3	LATFWHYAR3	537286	502909	466093
Q5BJQ2	Q5BJQ2	MINY1_RAT	Mindy1	Ubiquitin carboxyl-terminal hydrolase MINDY-1	1	LATGLDVNVR	LATGLDVNVR	2	LATGLDVNVR2	77011.3	69969.8	58332
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	LATGSDDNCAAFFEGPPFK	LATGSDDNC(UniMod:4)AAFFEGPPFK	3	LATGSDDNC(UniMod:4)AAFFEGPPFK3	40933.4	30814.7	42666
D4ACK7	D4ACK7	D4ACK7_RAT	Cnnm3	Metal transporter	1	LATHHYLYQR	LATHHYLYQR	3	LATHHYLYQR3	9281.13	4369.86	
B5DEI0	B5DEI0	B5DEI0_RAT	Pcyox1l	Pcyox1l protein	1	LATISVNK	LATISVNK	2	LATISVNK2	91486.9	96403.5	100417
A0A8I6ANB2	A0A8I6ANB2	A0A8I6ANB2_RAT	Ppfibp1	PPFIA binding protein 1	1	LATKPETSFEEGDGR	LATKPETSFEEGDGR	3	LATKPETSFEEGDGR3	8623.45	10730.6	10417.4
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	LATLAALDALAQSQGLGLPPPAVR	LATLAALDALAQSQGLGLPPPAVR	3	LATLAALDALAQSQGLGLPPPAVR3	33212.8	24833.3	26473.7
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	LATLAALDALAQSQGLGLPPPAVR	LATLAALDALAQSQGLGLPPPAVR	4	LATLAALDALAQSQGLGLPPPAVR4	10027.8		
A0A8I5ZW56	A0A8I5ZW56	A0A8I5ZW56_RAT	Clec16a	C-type lectin domain containing 16A	1	LATLELSCLLLK	LATLELSC(UniMod:4)LLLK	2	LATLELSC(UniMod:4)LLLK2	12304.4	9199.46	4950.81
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	LATLETEAAQHQAVIDGLTR	LATLETEAAQHQAVIDGLTR	3	LATLETEAAQHQAVIDGLTR3	13321.4	10507.9	6441.11
Q6P6S9	Q6P6S9	ENTP5_RAT	Entpd5	Ectonucleoside triphosphate diphosphohydrolase 5	1	LATLGALEAEGTDGHTFR	LATLGALEAEGTDGHTFR	2	LATLGALEAEGTDGHTFR2	4564.81	842.952	
Q6P6S9	Q6P6S9	ENTP5_RAT	Entpd5	Ectonucleoside triphosphate diphosphohydrolase 5	1	LATLGALEAEGTDGHTFR	LATLGALEAEGTDGHTFR	3	LATLGALEAEGTDGHTFR3	50951.3	48317.4	64606.4
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	LATLGGSQALGLDR	LATLGGSQALGLDR	2	LATLGGSQALGLDR2	37917.4	28005.3	33149.2
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	LATLLGLQAPPTR	LATLLGLQAPPTR	2	LATLLGLQAPPTR2	108742	149251	107957
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	LATLLGLQAPPTR	LATLLGLQAPPTR	3	LATLLGLQAPPTR3	11636.3	11997.4	14593.3
D3ZUP5	D3ZUP5	D3ZUP5_RAT	Brk1	BRICK1 subunit of SCAR/WAVE actin nucleating complex	1	LATLNEK	LATLNEK	1	LATLNEK1	1094.51	793.246	1431.88
D3ZUP5	D3ZUP5	D3ZUP5_RAT	Brk1	BRICK1 subunit of SCAR/WAVE actin nucleating complex	1	LATLNEK	LATLNEK	2	LATLNEK2	400449	456307	391212
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	LATLNIHDYLTK	LATLNIHDYLTK	3	LATLNIHDYLTK3	8804.32	7391.73	11703
Q5XI52	Q5XI52	VEZA_RAT	Vezt	Vezatin	1	LATLYMLK	LATLYMLK	2	LATLYMLK2	4091.55	2315.23	
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	LATMYSSGSPEGGSDSSESR	LATMYSSGSPEGGSDSSESR	3	LATMYSSGSPEGGSDSSESR3	4404.91	5638.38	5819.04
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	LATNAAVTVLR	LATNAAVTVLR	2	LATNAAVTVLR2	136163	107715	102594
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	LATNMAVITNFSAR	LATNMAVITNFSAR	2	LATNMAVITNFSAR2	19467.3	27007.4	16888.1
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	LATNMAVITNFSAR	LATNMAVITNFSAR	3	LATNMAVITNFSAR3	3587.75	5776.23	
Q9JJM9	Q9JJM9	SEPT5_RAT	Septin5	Septin-5	1	LATPEDK	LATPEDK	2	LATPEDK2	14505.7	12243	
A0A0G2JZP9	A0A8I6AJA6;A0A0G2JZP9	A0A0G2JZP9_RAT	Rnf11	Ring finger protein 11-like 1	0	LATQLTEEEQIR	LATQLTEEEQIR	2	LATQLTEEEQIR2	110047	101483	116692
P41123	D3ZD02;F1M2E9;A0A8I5ZNK4;P41123	RL13_RAT	Rpl13	Large ribosomal subunit protein eL13	0	LATQLTGPVMPIR	LATQLTGPVMPIR	2	LATQLTGPVMPIR2	29330.4	26920.1	23834.5
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	LATQVIK	LATQVIK	2	LATQVIK2	21544.3	14970.5	
Q5FVN0	Q5FVN0	MBOA5_RAT	Lpcat3	Lysophospholipid acyltransferase 5	1	LATSLGASEQALR	LATSLGASEQALR	2	LATSLGASEQALR2	26549.3	23779.4	21272.9
Q3MHU5	Q3MHU5	RETR2_RAT	Retreg2	Reticulophagy regulator 2	1	LATSLWLR	LATSLWLR	2	LATSLWLR2	8170.22	6302.43	10334.3
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	LATSPQGLLK	LATSPQGLLK	2	LATSPQGLLK2	18246.8	22938.7	15042.9
F7EUD8	F7EUD8	F7EUD8_RAT	Trpc6	Transient receptor ion channel domain-containing protein	1	LATSPSQSELQQDDFYAYDEDGTR	LATSPSQSELQQDDFYAYDEDGTR	3	LATSPSQSELQQDDFYAYDEDGTR3	35066.2	27976.7	38516.5
P23711	P23711	HMOX2_RAT	Hmox2	Heme oxygenase 2	1	LATTALYFTYSALEEEMDR	LATTALYFTYSALEEEMDR	3	LATTALYFTYSALEEEMDR3	2222.53	1735.64	2168.96
P23711	P23711	HMOX2_RAT	Hmox2	Heme oxygenase 2	1	LATTALYFTYSALEEEMDRNK	LATTALYFTYSALEEEMDRNK	3	LATTALYFTYSALEEEMDRNK3	10486.7	12820.2	12242.1
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	LATTVSAPDLK	LATTVSAPDLK	2	LATTVSAPDLK2	10831.8	10328.5	12566.2
D3ZZL9	D3ZZL9	GCC2_RAT	Gcc2	GRIP and coiled-coil domain-containing protein 2	1	LATVAQGEEESASR	LATVAQGEEESASR	2	LATVAQGEEESASR2	3469.79		4423.84
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	LATVGELHAAWR	LATVGELHAAWR	3	LATVGELHAAWR3	19393.5	22781.2	18289.6
M0RCA3	M0RCA3	M0RCA3_RAT	Zfpl1	Zinc finger protein-like 1	1	LATVNWAR	LATVNWAR	2	LATVNWAR2	51698.4	53603.4	59554
F1M8H2	F1M8H2	F1M8H2_RAT	Wars2	tryptophan--tRNA ligase	1	LATVQITDSPEEIVR	LATVQITDSPEEIVR	2	LATVQITDSPEEIVR2	2793.08		2698.27
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	LATYEEILGAPHASEQR	LATYEEILGAPHASEQR	3	LATYEEILGAPHASEQR3	14406.3	10676.1	11081.2
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	LAVAGEDAR	LAVAGEDAR	2	LAVAGEDAR2	252091	246037	226560
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	LAVAGLPR	LAVAGLPR	2	LAVAGLPR2	293082	308158	295870
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	LAVASLLK	LAVASLLK	2	LAVASLLK2	55211.7	63723.2	55870.5
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	LAVATFAGIENK	LAVATFAGIENK	2	LAVATFAGIENK2	82611	72638.8	72719.3
A0A8I5ZQ72	A0A8I5ZQ72	A0A8I5ZQ72_RAT	Zc3h12c	Zinc finger CCCH type containing 12C	1	LAVDWFLER	LAVDWFLER	2	LAVDWFLER2	6915.28	3074.39	6226.52
P07335	P07335	KCRB_RAT	Ckb	Creatine kinase B-type	1	LAVEALSSLDGDLSGR	LAVEALSSLDGDLSGR	2	LAVEALSSLDGDLSGR2	71295.9	69077.1	62921.6
P07335	P07335	KCRB_RAT	Ckb	Creatine kinase B-type	1	LAVEALSSLDGDLSGR	LAVEALSSLDGDLSGR	3	LAVEALSSLDGDLSGR3	14033.2	7321.69	12190.8
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	LAVEAVLR	LAVEAVLR	2	LAVEAVLR2	503415	523590	382882
F1M1H0	F1M1H0	F1M1H0_RAT	Dera	deoxyribose-phosphate aldolase	1	LAVEDGATEIDVVINR	LAVEDGATEIDVVINR	2	LAVEDGATEIDVVINR2	4035.42	3012.72	5784.72
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	LAVEETK	LAVEETK	2	LAVEETK2	116074	105349	127389
Q63184	Q63184	E2AK2_RAT	Eif2ak2	Interferon-induced, double-stranded RNA-activated protein kinase	1	LAVEILDNENK	LAVEILDNENK	2	LAVEILDNENK2	2579.65	9184.93	3726.17
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	LAVGSEFEFGAK	LAVGSEFEFGAK	2	LAVGSEFEFGAK2	95718	77339.2	103986
Q8R4Z9	Q8R4Z9	MFN1_RAT	Mfn1	Mitofusin-1	1	LAVIGEVLSR	LAVIGEVLSR	2	LAVIGEVLSR2	16617.2	9593.9	11335.4
A0A8I6B124	A0A8I6B124	A0A8I6B124_RAT	Zswim8	Zinc finger, SWIM-type containing 8	1	LAVLDPALSPQR	LAVLDPALSPQR	2	LAVLDPALSPQR2	10209.8	7280.17	3971.47
Q9ERR2	Q9ERR2	COMD5_RAT	Commd5	COMM domain-containing protein 5	1	LAVLLAGTHTLLQQALR	LAVLLAGTHTLLQQALR	3	LAVLLAGTHTLLQQALR3	5797.64		5640.06
B5DEP5	B5DEP5	B5DEP5_RAT	Trip4	Thyroid hormone receptor interactor 4	1	LAVLLPGR	LAVLLPGR	2	LAVLLPGR2	27080.8	22843.3	19809.6
D3ZWS0	D3ZWS0	D3ZWS0_RAT	Scrib	Scribble planar cell polarity protein	1	LAVLPPELAHTAELHVLDVAGNR	LAVLPPELAHTAELHVLDVAGNR	4	LAVLPPELAHTAELHVLDVAGNR4	3345.21	3715.53	4401.05
Q6P791	Q6P791	LTOR1_RAT	Lamtor1	Ragulator complex protein LAMTOR1	1	LAVLSSSLTHWK	LAVLSSSLTHWK	2	LAVLSSSLTHWK2	14307.5	13004.5	18255.8
Q6P791	Q6P791	LTOR1_RAT	Lamtor1	Ragulator complex protein LAMTOR1	1	LAVLSSSLTHWK	LAVLSSSLTHWK	3	LAVLSSSLTHWK3	61605.6	58335.2	56181
F7ETN7	F7ETN7	F7ETN7_RAT	B4galt7	Beta-1,4-galactosyltransferase	1	LAVLVPFR	LAVLVPFR	2	LAVLVPFR2	16244	15083.8	24717.7
P85108	P69897;Q4QRB4;M0R8B6;Q6P9T8;B4F7C2;P85108;Q4QQV0;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	LAVNMVPFPR	LAVNMVPFPR	2	LAVNMVPFPR2	3.13754e+07	3.37184e+07	3.58656e+07
P85108	P69897;Q4QRB4;M0R8B6;Q6P9T8;B4F7C2;P85108;Q4QQV0;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	LAVNMVPFPR	LAVNMVPFPR	3	LAVNMVPFPR3	946631	1.12183e+06	1.14665e+06
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	LAVNMVPFPRLHFFMPGFAPLTAQGSQQYR	LAVNMVPFPRLHFFMPGFAPLTAQGSQQYR	4	LAVNMVPFPRLHFFMPGFAPLTAQGSQQYR4	5714.48	5457.46	15603.1
P85108	P69897;Q6P9T8;B4F7C2;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	LAVNMVPFPRLHFFMPGFAPLTSR	LAVNMVPFPRLHFFMPGFAPLTSR	4	LAVNMVPFPRLHFFMPGFAPLTSR4	29177.7	20924.8	23937.3
D4A3I4	A0A0G2K4W2;D4A3I4	D4A3I4_RAT	Btf3l4	Transcription factor BTF3	0	LAVNNIAGIEEVNMIK	LAVNNIAGIEEVNMIK	2	LAVNNIAGIEEVNMIK2	4828.49		1533.69
D4A3I4	A0A0G2K4W2;D4A3I4	D4A3I4_RAT	Btf3l4	Transcription factor BTF3	0	LAVNNIAGIEEVNMIKDDGTVIHFNNPK	LAVNNIAGIEEVNMIKDDGTVIHFNNPK	4	LAVNNIAGIEEVNMIKDDGTVIHFNNPK4	10459	13314.5	14425.5
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	LAVPGDQKPENAKPNR	LAVPGDQKPENAKPNR	4	LAVPGDQKPENAKPNR4	10834	16641.6	13536.4
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	LAVSQVPR	LAVSQVPR	2	LAVSQVPR2	403826	371540	350976
B5DFC3	B5DFC3	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	1	LAVSSAA	LAVSSAA	1	LAVSSAA1	11662.6	12790.2	12925.7
D3ZKT0	D3ZKT0	TAM41_RAT	Tamm41	Phosphatidate cytidylyltransferase, mitochondrial	1	LAVSSIVRPSSIR	LAVSSIVRPSSIR	3	LAVSSIVRPSSIR3	29591.2	34580.4	28813.3
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	LAVTSYK	LAVTSYK	2	LAVTSYK2	66962.5	57879.3	51821.8
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	LAVVEVQCER	LAVVEVQC(UniMod:4)ER	2	LAVVEVQC(UniMod:4)ER2	8922.72	9889.5	
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	LAVVSATEILK	LAVVSATEILK	2	LAVVSATEILK2	12407.3	22837.6	21442.7
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	LAVYIDR	LAVYIDR	2	LAVYIDR2	74861.4	52071.9	62621.6
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	LAVYKAGAQEGAER	LAVYKAGAQEGAER	2	LAVYKAGAQEGAER2	3070.1		2601.28
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	LAVYKAGAQEGAER	LAVYKAGAQEGAER	3	LAVYKAGAQEGAER3	51772.9	46266.4	52879.2
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	LAWAQQLCLLPR	LAWAQQLC(UniMod:4)LLPR	2	LAWAQQLC(UniMod:4)LLPR2	7648.11	4876.09	2986
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	LAWDFSPEQLDHLFDCFK	LAWDFSPEQLDHLFDC(UniMod:4)FK	3	LAWDFSPEQLDHLFDC(UniMod:4)FK3	9327.55	13339.6	13662.4
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	LAWGQPVGLR	LAWGQPVGLR	2	LAWGQPVGLR2	65882.2	65332.7	61081.1
A0A8I6AI88	A0A8I6AI88	A0A8I6AI88_RAT	Chpf2	Hexosyltransferase	1	LAWLAVR	LAWLAVR	2	LAWLAVR2	10444.9	8001.84	11237.7
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	LAWLEASEIEDEEEK	LAWLEASEIEDEEEK	2	LAWLEASEIEDEEEK2	37680.8	38797.3	37776.7
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	LAWLSSMTK	LAWLSSMTK	2	LAWLSSMTK2	9891.13	19007.1	20698.7
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	LAWTGIQEYLVSTGFNQMR	LAWTGIQEYLVSTGFNQMR	3	LAWTGIQEYLVSTGFNQMR3	33686.9	35965.5	40363.9
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	LAWVGDVFTTTPTDPRPLTSPLR	LAWVGDVFTTTPTDPRPLTSPLR	3	LAWVGDVFTTTPTDPRPLTSPLR3	22750	22422.2	24271.6
Q99PD4	Q99PD4	ARC1A_RAT	Arpc1a	Actin-related protein 2/3 complex subunit 1A	1	LAWVSHDSTVSVADASK	LAWVSHDSTVSVADASK	2	LAWVSHDSTVSVADASK2	2408.39	2141.2	
Q99PD4	Q99PD4	ARC1A_RAT	Arpc1a	Actin-related protein 2/3 complex subunit 1A	1	LAWVSHDSTVSVADASK	LAWVSHDSTVSVADASK	3	LAWVSHDSTVSVADASK3	76724.1	69796.2	75455
O70593	O70593	SGTA_RAT	Sgta	Small glutamine-rich tetratricopeptide repeat-containing protein alpha	1	LAYAIIQFLHGQLR	LAYAIIQFLHGQLR	2	LAYAIIQFLHGQLR2	9396.59		
O70593	O70593	SGTA_RAT	Sgta	Small glutamine-rich tetratricopeptide repeat-containing protein alpha	1	LAYAIIQFLHGQLR	LAYAIIQFLHGQLR	3	LAYAIIQFLHGQLR3	10215.7	7902.76	9110.05
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	LAYEGVSSR	LAYEGVSSR	2	LAYEGVSSR2	338696	365541	362966
Q6AYB5	Q6AYB5	SRP54_RAT	Srp54	Signal recognition particle subunit SRP54	1	LAYFYQR	LAYFYQR	2	LAYFYQR2	14286.1	10492.6	8100.16
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	LAYINPDLALEEK	LAYINPDLALEEK	2	LAYINPDLALEEK2	90804.7	58192.4	58161.7
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	LAYLHSHK	LAYLHSHK	2	LAYLHSHK2	4243.98		4587.58
D4A7D3	D4A7D3	D4A7D3_RAT	Tbk1	TANK-binding kinase 1	1	LAYNEEQIHK	LAYNEEQIHK	3	LAYNEEQIHK3		3660.04	4871.59
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	LAYPETKPEVR	LAYPETKPEVR	2	LAYPETKPEVR2	8100.85	8824.12	
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	LAYPETKPEVR	LAYPETKPEVR	3	LAYPETKPEVR3	98177.5	121471	101456
Q3MID3	Q3MID3	ARFG2_RAT	Arfgap2	ADP-ribosylation factor GTPase-activating protein 2	1	LAYQELQIDR	LAYQELQIDR	2	LAYQELQIDR2	13108.6	10232.5	6248.29
A0A8I6B124	A0A8I6B124	A0A8I6B124_RAT	Zswim8	Zinc finger, SWIM-type containing 8	1	LAYQESEVAALLK	LAYQESEVAALLK	2	LAYQESEVAALLK2		2377.44	3253.42
D3ZFQ8	D3ZFQ8	D3ZFQ8_RAT	Cyc1	Cytochrome c-1	1	LAYRPPK	LAYRPPK	2	LAYRPPK2	60717.4	47549	60339
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	LAYTLLNK	LAYTLLNK	2	LAYTLLNK2	10522.4	12341.4	12975.2
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	LAYVAPTIPR	LAYVAPTIPR	2	LAYVAPTIPR2	333375	314185	333618
Q8R492	Q8R492	Q8R492_RAT	Fap	Fibroblast activation protein, alpha	1	LAYVYQNNIYLK	LAYVYQNNIYLK	2	LAYVYQNNIYLK2	17310.5	16431.8	17774.7
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	LAYYEIR	LAYYEIR	2	LAYYEIR2	6576.65	13403.3	10694.5
Q923S8	Q923S8	PANK4_RAT	Pank4	4'-phosphopantetheine phosphatase	1	LAYYSTVQHK	LAYYSTVQHK	3	LAYYSTVQHK3	5536.72	3431.47	5009.86
P80254	P80254	DOPD_RAT	Ddt	D-dopachrome decarboxylase	1	LCAATATILDKPEDR	LC(UniMod:4)AATATILDKPEDR	3	LC(UniMod:4)AATATILDKPEDR3	39861.1	31241.1	34594.6
Q4V884	Q4V884	Q4V884_RAT	Cdc16	CDC16 cell division cycle 16 homolog (S. cerevisiae)	1	LCAEEQELLR	LC(UniMod:4)AEEQELLR	2	LC(UniMod:4)AEEQELLR2	22945.6	19505.6	24173.1
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	LCAGASEDIR	LC(UniMod:4)AGASEDIR	2	LC(UniMod:4)AGASEDIR2	15312.5	10852.4	8685.58
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	LCAGASEDIREK	LC(UniMod:4)AGASEDIREK	3	LC(UniMod:4)AGASEDIREK3	5070.02	18039.8	9299.29
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	LCAGLDCPWK	LC(UniMod:4)AGLDC(UniMod:4)PWK	2	LC(UniMod:4)AGLDC(UniMod:4)PWK2	10960.4	15665.9	13573.1
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	LCALYGK	LC(UniMod:4)ALYGK	2	LC(UniMod:4)ALYGK2	72153.1	75436.4	82968.1
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	LCAQLEGLQSTVTDHVER	LC(UniMod:4)AQLEGLQSTVTDHVER	3	LC(UniMod:4)AQLEGLQSTVTDHVER3	3180.52	10528.7	9250.79
Q5I0L4	Q5I0L4	NUBP1_RAT	Nubp1	Cytosolic Fe-S cluster assembly factor NUBP1	1	LCASGAGAAPDPAVEEIREK	LC(UniMod:4)ASGAGAAPDPAVEEIREK	3	LC(UniMod:4)ASGAGAAPDPAVEEIREK3	5482.71		7624.66
F1MAR6	F1MAR6	F1MAR6_RAT	Prodh	Proline dehydrogenase	1	LCASPVLLAHHEQLFQVAR	LC(UniMod:4)ASPVLLAHHEQLFQVAR	4	LC(UniMod:4)ASPVLLAHHEQLFQVAR4	6282.2	6865.4	4823.7
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	LCCGLSMFEVILTR	LC(UniMod:4)C(UniMod:4)GLSMFEVILTR	2	LC(UniMod:4)C(UniMod:4)GLSMFEVILTR2	36374.5	22841.8	31721.6
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	LCCGLSMFEVILTR	LC(UniMod:4)C(UniMod:4)GLSMFEVILTR	3	LC(UniMod:4)C(UniMod:4)GLSMFEVILTR3	16565.2	29172.1	16334
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	LCDALIDSIPFAHK	LC(UniMod:4)DALIDSIPFAHK	3	LC(UniMod:4)DALIDSIPFAHK3	13938.6	10462.1	
Q6MG06	Q6MG06	GNL1_RAT	Gnl1	Guanine nucleotide-binding protein-like 1	1	LCDCPGLIFPSLLPR	LC(UniMod:4)DC(UniMod:4)PGLIFPSLLPR	2	LC(UniMod:4)DC(UniMod:4)PGLIFPSLLPR2	17117.8	19260	16122.7
Q6MG06	Q6MG06	GNL1_RAT	Gnl1	Guanine nucleotide-binding protein-like 1	1	LCDCPGLIFPSLLPR	LC(UniMod:4)DC(UniMod:4)PGLIFPSLLPR	3	LC(UniMod:4)DC(UniMod:4)PGLIFPSLLPR3	4009.95	5536.2	7452.62
D3ZNK1	D3ZNK1	D3ZNK1_RAT	Mtx3	Metaxin	1	LCDDILDSYFR	LC(UniMod:4)DDILDSYFR	2	LC(UniMod:4)DDILDSYFR2	2795.26	1127.91	2025.54
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LCDEQLSSQSHYDFGLR	LC(UniMod:4)DEQLSSQSHYDFGLR	3	LC(UniMod:4)DEQLSSQSHYDFGLR3	150526	170975	162666
F1LN87	F1LN87	F1LN87_RAT	Mapkapk5	non-specific serine/threonine protein kinase	1	LCDFGFAK	LC(UniMod:4)DFGFAK	2	LC(UniMod:4)DFGFAK2			14318.3
Q5XIS9	Q66HE7;D4A229;Q5XIS9;Q5XIT0;Q9WTQ1;Q9JM01;A0A8I5ZVL4;A0A8I5Y8C3	KPCD2_RAT	Prkd2	Serine/threonine-protein kinase D2	0	LCDFGFAR	LC(UniMod:4)DFGFAR	2	LC(UniMod:4)DFGFAR2	8675.95	6201.77	11477.7
P18266	P18266;P18265	GSK3B_RAT	Gsk3b	Glycogen synthase kinase-3 beta	0	LCDFGSAK	LC(UniMod:4)DFGSAK	2	LC(UniMod:4)DFGSAK2	34477.4	34136.1	27126
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	LCDFGSATTISHYPDYSWSAQK	LC(UniMod:4)DFGSATTISHYPDYSWSAQK	3	LC(UniMod:4)DFGSATTISHYPDYSWSAQK3	46233.3	62771.4	40696.6
Q01986	Q01986;P36506	MP2K1_RAT	Map2k1	Dual specificity mitogen-activated protein kinase kinase 1	0	LCDFGVSGQLIDSMANSFVGTR	LC(UniMod:4)DFGVSGQLIDSMANSFVGTR	3	LC(UniMod:4)DFGVSGQLIDSMANSFVGTR3	19999.1	14924.8	15670.2
P08081	P08081	CLCA_RAT	Clta	Clathrin light chain A	1	LCDFNPK	LC(UniMod:4)DFNPK	1	LC(UniMod:4)DFNPK1	7129.35	8028.4	3156.95
P08081	P08081	CLCA_RAT	Clta	Clathrin light chain A	1	LCDFNPK	LC(UniMod:4)DFNPK	2	LC(UniMod:4)DFNPK2	1.16822e+06	1.23256e+06	1.23518e+06
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	LCDKDVNECSQK	LC(UniMod:4)DKDVNEC(UniMod:4)SQK	2	LC(UniMod:4)DKDVNEC(UniMod:4)SQK2	15467.9		4521.34
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	LCDKDVNECSQK	LC(UniMod:4)DKDVNEC(UniMod:4)SQK	3	LC(UniMod:4)DKDVNEC(UniMod:4)SQK3	17644.8		16734.5
A0A8I6AAF1	A0A8I6AAF1	A0A8I6AAF1_RAT	Card19	Caspase recruitment domain family, member 19	1	LCDLLSHLQQR	LC(UniMod:4)DLLSHLQQR	2	LC(UniMod:4)DLLSHLQQR2	5369.87		
A0A8I6AAF1	A0A8I6AAF1	A0A8I6AAF1_RAT	Card19	Caspase recruitment domain family, member 19	1	LCDLLSHLQQR	LC(UniMod:4)DLLSHLQQR	3	LC(UniMod:4)DLLSHLQQR3	36004	53650.6	60879.3
Q9JL55	Q9JL55	GDE1_RAT	Gde1	Glycerophosphodiester phosphodiesterase 1	1	LCDLTFEQVR	LC(UniMod:4)DLTFEQVR	2	LC(UniMod:4)DLTFEQVR2	69676.5	55050.1	56544
Q9JL55	Q9JL55	GDE1_RAT	Gde1	Glycerophosphodiester phosphodiesterase 1	1	LCDLTFEQVRK	LC(UniMod:4)DLTFEQVRK	3	LC(UniMod:4)DLTFEQVRK3	22562.1	18531.6	23848.4
B0BNN4	B0BNN4	B0BNN4_RAT	Cfp	Complement factor properdin	1	LCDNPAPK	LC(UniMod:4)DNPAPK	2	LC(UniMod:4)DNPAPK2	176635	160353	149548
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	LCDPNTRPVGEK	LC(UniMod:4)DPNTRPVGEK	2	LC(UniMod:4)DPNTRPVGEK2	3861.34	5822.97	3258.15
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	LCDPNTRPVGEK	LC(UniMod:4)DPNTRPVGEK	3	LC(UniMod:4)DPNTRPVGEK3	194517	190107	147234
O88994	O88994	MARC2_RAT	Mtarc2	Mitochondrial amidoxime reducing component 2	1	LCDPSVK	LC(UniMod:4)DPSVK	2	LC(UniMod:4)DPSVK2	88687.2	90184.5	107876
E9PU15	E9PU15	E9PU15_RAT	Dicer1	Endoribonuclease Dicer	1	LCDSCPSCPR	LC(UniMod:4)DSC(UniMod:4)PSC(UniMod:4)PR	2	LC(UniMod:4)DSC(UniMod:4)PSC(UniMod:4)PR2	4444.82	8605.82	10157.1
P18266	P18266	GSK3B_RAT	Gsk3b	Glycogen synthase kinase-3 beta	1	LCDSGELVAIK	LC(UniMod:4)DSGELVAIK	2	LC(UniMod:4)DSGELVAIK2	10434.5	13859.5	13350.7
P18266	P18266	GSK3B_RAT	Gsk3b	Glycogen synthase kinase-3 beta	1	LCDSGELVAIKK	LC(UniMod:4)DSGELVAIKK	3	LC(UniMod:4)DSGELVAIKK3	14446	15486.9	10246.8
Q5XIE4	Q5XIE4	Q5XIE4_RAT	Rchy1	Ring finger and CHY zinc finger domain containing 1	1	LCDSYNTAQAGGR	LC(UniMod:4)DSYNTAQAGGR	2	LC(UniMod:4)DSYNTAQAGGR2	1250.65	1661.12	2816.79
Q9Z1L0	Q9Z1L0	PK3CB_RAT	Pik3cb	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform	1	LCDVRPFLPVLK	LC(UniMod:4)DVRPFLPVLK	3	LC(UniMod:4)DVRPFLPVLK3	26288.4	28778.6	9872.53
Q5XI83	Q5XI83	VP35L_RAT	Vps35l	VPS35 endosomal protein-sorting factor-like	1	LCEAAMVQILEHLK	LC(UniMod:4)EAAMVQILEHLK	3	LC(UniMod:4)EAAMVQILEHLK3	5034.05	4405.31	3904.41
P02761	M0R8N5;M0R620;P02761	MUP_RAT		Major urinary protein	0	LCEAHGITR	LC(UniMod:4)EAHGITR	2	LC(UniMod:4)EAHGITR2	20628.5	16150.6	8958.2
A0A8I6AL00	A0A8I6AL00	A0A8I6AL00_RAT	Ndufs8	NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial	1	LCEAICPAQAITIEAEPR	LC(UniMod:4)EAIC(UniMod:4)PAQAITIEAEPR	3	LC(UniMod:4)EAIC(UniMod:4)PAQAITIEAEPR3	43002	43843	57035.8
M0R4M1	M0R4M1	M0R4M1_RAT	Nlrc5	NLR family, CARD domain containing 5	1	LCECSFSTEQVSR	LC(UniMod:4)EC(UniMod:4)SFSTEQVSR	2	LC(UniMod:4)EC(UniMod:4)SFSTEQVSR2	2862.23	2728.86	
D3ZHZ3	D3ZHZ3	D3ZHZ3_RAT	Osbpl3	Oxysterol-binding protein	1	LCEELEYSELLDK	LC(UniMod:4)EELEYSELLDK	2	LC(UniMod:4)EELEYSELLDK2	3096.29	2796.82	
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	LCEEPICILPCLNGGR	LC(UniMod:4)EEPIC(UniMod:4)ILPC(UniMod:4)LNGGR	2	LC(UniMod:4)EEPIC(UniMod:4)ILPC(UniMod:4)LNGGR2	40231.8	39816.5	40302.6
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	LCEEPICILPCLNGGR	LC(UniMod:4)EEPIC(UniMod:4)ILPC(UniMod:4)LNGGR	3	LC(UniMod:4)EEPIC(UniMod:4)ILPC(UniMod:4)LNGGR3	8924.69	20233.8	8802.6
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	LCEFNCNIR	LC(UniMod:4)EFNC(UniMod:4)NIR	2	LC(UniMod:4)EFNC(UniMod:4)NIR2	16959.4	18427.2	22569.8
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	LCEFPCTCGPHGK	LC(UniMod:4)EFPC(UniMod:4)TC(UniMod:4)GPHGK	2	LC(UniMod:4)EFPC(UniMod:4)TC(UniMod:4)GPHGK2	14191	7179.9	10063.9
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	LCEFPCTCGPHGK	LC(UniMod:4)EFPC(UniMod:4)TC(UniMod:4)GPHGK	3	LC(UniMod:4)EFPC(UniMod:4)TC(UniMod:4)GPHGK3	153910	135654	106474
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	LCELLSEQF	LC(UniMod:4)ELLSEQF	2	LC(UniMod:4)ELLSEQF2	5834.45	8549.84	
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	LCENGNMNNVVTR	LC(UniMod:4)ENGNMNNVVTR	2	LC(UniMod:4)ENGNMNNVVTR2	30557	36033.7	26866.6
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	LCENGNMNNVVTR	LC(UniMod:4)ENGNMNNVVTR	3	LC(UniMod:4)ENGNMNNVVTR3	3657.49		3628.97
P04762	P04762	CATA_RAT	Cat	Catalase	1	LCENIANHLK	LC(UniMod:4)ENIANHLK	3	LC(UniMod:4)ENIANHLK3	6931.74	3598.44	4869.75
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	LCENSDPTNVLSCHFSK	LC(UniMod:4)ENSDPTNVLSC(UniMod:4)HFSK	3	LC(UniMod:4)ENSDPTNVLSC(UniMod:4)HFSK3	17919.1	11990.5	10476.4
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	LCENYIR	LC(UniMod:4)ENYIR	2	LC(UniMod:4)ENYIR2	19098.2	14323.8	13318.9
A0A8I5ZZ71	A0A8I5ZZ71	A0A8I5ZZ71_RAT	Mzt1	Mitotic spindle organizing protein 1	1	LCEQGINPEALSSVIK	LC(UniMod:4)EQGINPEALSSVIK	2	LC(UniMod:4)EQGINPEALSSVIK2		5519.57	
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	LCESHPDATEDLQK	LC(UniMod:4)ESHPDATEDLQK	3	LC(UniMod:4)ESHPDATEDLQK3	11604.5	21435.7	15953.1
P36953	P36953	AFAM_RAT	Afm	Afamin	1	LCFFYNK	LC(UniMod:4)FFYNK	2	LC(UniMod:4)FFYNK2	90297.5	69461.7	73043.7
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	LCFQHNTPLDAIAQFR	LC(UniMod:4)FQHNTPLDAIAQFR	2	LC(UniMod:4)FQHNTPLDAIAQFR2	2523.45		
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	LCFQHNTPLDAIAQFR	LC(UniMod:4)FQHNTPLDAIAQFR	3	LC(UniMod:4)FQHNTPLDAIAQFR3	9958.84	15127.9	14953.6
A0A8I6A5H5	A0A8I6A5H5	A0A8I6A5H5_RAT	Rela	RELA proto-oncogene, NF-kB subunit	1	LCFQVTVR	LC(UniMod:4)FQVTVR	2	LC(UniMod:4)FQVTVR2	18751.9	20520.1	19815
D3ZF26	D3ZF26	D3ZF26_RAT	Tnks1bp1	Tankyrase 1 binding protein 1	1	LCGAPSEVR	LC(UniMod:4)GAPSEVR	2	LC(UniMod:4)GAPSEVR2	12952.2	11057.9	8454.61
Q9QY17	Q9QY17	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	1	LCGDLMNCLHER	LC(UniMod:4)GDLMNC(UniMod:4)LHER	2	LC(UniMod:4)GDLMNC(UniMod:4)LHER2	16447	12562.8	15304
Q9QY17	Q9QY17	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	1	LCGDLMNCLHER	LC(UniMod:4)GDLMNC(UniMod:4)LHER	3	LC(UniMod:4)GDLMNC(UniMod:4)LHER3	82412.3	77079.7	72927.9
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	LCGDTNLNNMQR	LC(UniMod:4)GDTNLNNMQR	2	LC(UniMod:4)GDTNLNNMQR2	57073.5	57995.4	48102.6
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	LCGEVKPK	LC(UniMod:4)GEVKPK	2	LC(UniMod:4)GEVKPK2			2730.84
Q05511	Q05511	HEPS_RAT	Hpn	Serine protease hepsin	1	LCGIVSWGTGCALAR	LC(UniMod:4)GIVSWGTGC(UniMod:4)ALAR	2	LC(UniMod:4)GIVSWGTGC(UniMod:4)ALAR2	32030.3	29463.4	33779.3
Q05511	Q05511	HEPS_RAT	Hpn	Serine protease hepsin	1	LCGIVSWGTGCALAR	LC(UniMod:4)GIVSWGTGC(UniMod:4)ALAR	3	LC(UniMod:4)GIVSWGTGC(UniMod:4)ALAR3	6523.35	3731.23	
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	LCGPYEK	LC(UniMod:4)GPYEK	2	LC(UniMod:4)GPYEK2	104438	101126	104425
F7EMK2	F7EMK2	F7EMK2_RAT	Dpagt1	UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase	1	LCGQDLNK	LC(UniMod:4)GQDLNK	2	LC(UniMod:4)GQDLNK2	55902.7	61084.5	41921.9
D3ZYT8	D3ZYT8	D3ZYT8_RAT	Pikfyve	1-phosphatidylinositol-3-phosphate 5-kinase	1	LCGQIFCSR	LC(UniMod:4)GQIFC(UniMod:4)SR	2	LC(UniMod:4)GQIFC(UniMod:4)SR2		5967.2	5630.46
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	LCGSGFQSIVSGCQEICSK	LC(UniMod:4)GSGFQSIVSGC(UniMod:4)QEIC(UniMod:4)SK	3	LC(UniMod:4)GSGFQSIVSGC(UniMod:4)QEIC(UniMod:4)SK3	9665.59	5583	
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	LCGVEQDLAMGSDAEGEK	LC(UniMod:4)GVEQDLAMGSDAEGEK	2	LC(UniMod:4)GVEQDLAMGSDAEGEK2	119736	91297.3	104190
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	LCGVEQDLAMGSDAEGEK	LC(UniMod:4)GVEQDLAMGSDAEGEK	3	LC(UniMod:4)GVEQDLAMGSDAEGEK3	74477.7	60609.5	84009.4
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	LCGVEQDLAMGSDAEGEKIKDTMK	LC(UniMod:4)GVEQDLAMGSDAEGEKIKDTMK	4	LC(UniMod:4)GVEQDLAMGSDAEGEKIKDTMK4	18295.2	19922.9	25989.3
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	LCGYVPVHPDILSLK	LC(UniMod:4)GYVPVHPDILSLK	3	LC(UniMod:4)GYVPVHPDILSLK3	10993.1	11745.6	12426.9
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	LCHCPAGYAGPFCDLDLK	LC(UniMod:4)HC(UniMod:4)PAGYAGPFC(UniMod:4)DLDLK	3	LC(UniMod:4)HC(UniMod:4)PAGYAGPFC(UniMod:4)DLDLK3	197338	209557	187069
Q5XIE8	Q5XIE8	ITM2B_RAT	Itm2b	Integral membrane protein 2B	1	LCHDKETYK	LC(UniMod:4)HDKETYK	2	LC(UniMod:4)HDKETYK2			836.14
Q5XIE8	Q5XIE8	ITM2B_RAT	Itm2b	Integral membrane protein 2B	1	LCHDKETYK	LC(UniMod:4)HDKETYK	3	LC(UniMod:4)HDKETYK3			9483.86
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	LCHFPFQYHR	LC(UniMod:4)HFPFQYHR	2	LC(UniMod:4)HFPFQYHR2	21477.3	6903.86	9165.58
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	LCHFPFQYHR	LC(UniMod:4)HFPFQYHR	3	LC(UniMod:4)HFPFQYHR3	67291.5	28201.1	45181.5
Q6IE52	Q6IE52	MUG2_RAT	Mug2	Murinoglobulin-2	1	LCHGNPSFSSETK	LC(UniMod:4)HGNPSFSSETK	2	LC(UniMod:4)HGNPSFSSETK2	52628.5	30288	35527
Q6IE52	Q6IE52	MUG2_RAT	Mug2	Murinoglobulin-2	1	LCHGNPSFSSETK	LC(UniMod:4)HGNPSFSSETK	3	LC(UniMod:4)HGNPSFSSETK3	616490	511917	435789
Q5XIH9	Q5XIH9	HPDL_RAT	Hpdl	4-hydroxyphenylpyruvate dioxygenase-like protein	1	LCHIAFHVPAGQPLAR	LC(UniMod:4)HIAFHVPAGQPLAR	4	LC(UniMod:4)HIAFHVPAGQPLAR4	14678.8	2310.11	
Q9JLT0	Q9JLT0	MYH10_RAT	Myh10	Myosin-10	1	LCHLLGMNVMEFTR	LC(UniMod:4)HLLGMNVMEFTR	3	LC(UniMod:4)HLLGMNVMEFTR3		13961	5301.51
P01026	P01026	CO3_RAT	C3	Complement C3	1	LCHNEMCR	LC(UniMod:4)HNEMC(UniMod:4)R	2	LC(UniMod:4)HNEMC(UniMod:4)R2	18246.6		50367.8
Q498S0	Q498S0	Q498S0_RAT	Chst12	Carbohydrate sulfotransferase	1	LCHPCQIDYDFVGK	LC(UniMod:4)HPC(UniMod:4)QIDYDFVGK	3	LC(UniMod:4)HPC(UniMod:4)QIDYDFVGK3	31137.6	41584	37777.7
A0A0G2K069	A0A0G2K069	A0A0G2K069_RAT	Col11a2	Collagen type XI alpha 2 chain	1	LCHPELPDGEYWVDPNQGCAR	LC(UniMod:4)HPELPDGEYWVDPNQGC(UniMod:4)AR	3	LC(UniMod:4)HPELPDGEYWVDPNQGC(UniMod:4)AR3	22080.5	21952.5	20578.9
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	LCHQPSLCIFTNHTGSLCVCYSPK	LC(UniMod:4)HQPSLC(UniMod:4)IFTNHTGSLC(UniMod:4)VC(UniMod:4)YSPK	4	LC(UniMod:4)HQPSLC(UniMod:4)IFTNHTGSLC(UniMod:4)VC(UniMod:4)YSPK4	5653.84	5690.51	
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	LCIEEEAR	LC(UniMod:4)IEEEAR	2	LC(UniMod:4)IEEEAR2	132033	129723	138727
A0A8I6GEV9	A0A8I6GEV9	A0A8I6GEV9_RAT	Abce1	ATP binding cassette subfamily E member 1	1	LCIEVTPQSK	LC(UniMod:4)IEVTPQSK	2	LC(UniMod:4)IEVTPQSK2	10300.3	8290.68	15125.5
D3ZDR7	D3ZDR7	D3ZDR7_RAT	Themis2	Thymocyte selection associated family member 2	1	LCIYGPASSPWR	LC(UniMod:4)IYGPASSPWR	2	LC(UniMod:4)IYGPASSPWR2	9240.73	14214.1	12350
Q5U2N0	Q5U2N0	PYRG2_RAT	Ctps2	CTP synthase 2	1	LCLADGILVPGGFGIR	LC(UniMod:4)LADGILVPGGFGIR	2	LC(UniMod:4)LADGILVPGGFGIR2	12535.9	12689.8	13232.5
Q5U2N0	Q5U2N0	PYRG2_RAT	Ctps2	CTP synthase 2	1	LCLADGILVPGGFGIR	LC(UniMod:4)LADGILVPGGFGIR	3	LC(UniMod:4)LADGILVPGGFGIR3	5211.58	8314.12	
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	LCLCGNSSSCDPR	LC(UniMod:4)LC(UniMod:4)GNSSSC(UniMod:4)DPR	2	LC(UniMod:4)LC(UniMod:4)GNSSSC(UniMod:4)DPR2	2135.66	1555.78	3211.77
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	LCLELLNVGVESK	LC(UniMod:4)LELLNVGVESK	2	LC(UniMod:4)LELLNVGVESK2	6440.07	8102.82	7011.36
Q8CIN9	Q8CIN9	RFFL_RAT	Rffl	E3 ubiquitin-protein ligase rififylin	1	LCLLCLR	LC(UniMod:4)LLC(UniMod:4)LR	2	LC(UniMod:4)LLC(UniMod:4)LR2	18711.9	23019.1	32334.2
G3V9M3	G3V9M3	G3V9M3_RAT	Wdr47	WD repeat domain 47	1	LCLLLTLPR	LC(UniMod:4)LLLTLPR	2	LC(UniMod:4)LLLTLPR2	9020.91	10099.1	14896.5
O35854	O35854	BCAT2_RAT	Bcat2	Branched-chain-amino-acid aminotransferase, mitochondrial	1	LCLPDFDK	LC(UniMod:4)LPDFDK	2	LC(UniMod:4)LPDFDK2	25101.3	25980.7	15084.3
A0A8I6AAA9	A0A8I6AAA9	A0A8I6AAA9_RAT	Lrch1	Leucine rich repeats and calponin homology domain containing 1	1	LCLPHHILEEK	LC(UniMod:4)LPHHILEEK	3	LC(UniMod:4)LPHHILEEK3	11013.1	20796.2	11845
Q9Z142	Q9Z142	TMM33_RAT	Tmem33	Transmembrane protein 33	1	LCLQSIAFISR	LC(UniMod:4)LQSIAFISR	2	LC(UniMod:4)LQSIAFISR2	11363.3	13670.2	5236.95
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	LCLQVLR	LC(UniMod:4)LQVLR	2	LC(UniMod:4)LQVLR2	14388.7	14603.1	7977.78
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	LCLSDGPLR	LC(UniMod:4)LSDGPLR	2	LC(UniMod:4)LSDGPLR2	9158.82	14292	14179.1
A0A0G2K7Y9	P08723;A0A0G2K7Y9	A0A0G2K7Y9_RAT	Zg16b	Zymogen granule protein 16B	0	LCLTSLSFTTNK	LC(UniMod:4)LTSLSFTTNK	2	LC(UniMod:4)LTSLSFTTNK2	14862.4	11293.2	22979.3
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	LCLYTACAGIQPEK	LC(UniMod:4)LYTAC(UniMod:4)AGIQPEK	2	LC(UniMod:4)LYTAC(UniMod:4)AGIQPEK2	9299.8	10092.2	6199.65
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	LCMAALSHQPQEFPAYVEPTNDEICEAFR	LC(UniMod:4)MAALSHQPQEFPAYVEPTNDEIC(UniMod:4)EAFR	4	LC(UniMod:4)MAALSHQPQEFPAYVEPTNDEIC(UniMod:4)EAFR4	268888	199031	159738
B1WBY5	B1WBY5	B1WBY5_RAT	Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	1	LCMLYHPDK	LC(UniMod:4)MLYHPDK	3	LC(UniMod:4)MLYHPDK3	9037.64	3621.54	7044.07
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	LCMSLMQNK	LC(UniMod:4)MSLMQNK	2	LC(UniMod:4)MSLMQNK2	35695.6	26085.7	18639.3
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	LCNAPQPPSQPLPGTAEEESR	LC(UniMod:4)NAPQPPSQPLPGTAEEESR	3	LC(UniMod:4)NAPQPPSQPLPGTAEEESR3	52842.4	47335.7	58141.4
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	LCNGIQDCMDGSDEGAHCR	LC(UniMod:4)NGIQDC(UniMod:4)MDGSDEGAHC(UniMod:4)R	3	LC(UniMod:4)NGIQDC(UniMod:4)MDGSDEGAHC(UniMod:4)R3	30806	42107.4	36263.5
A0A8I6AEI3	A0A8I6AEI3	A0A8I6AEI3_RAT	Wwox	WW domain-containing oxidoreductase	1	LCNILFSNELHR	LC(UniMod:4)NILFSNELHR	3	LC(UniMod:4)NILFSNELHR3	9274.25	6935.15	7719.6
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	LCNLLVDVEEWGQVVIIHMLTR	LC(UniMod:4)NLLVDVEEWGQVVIIHMLTR	3	LC(UniMod:4)NLLVDVEEWGQVVIIHMLTR3		5386.03	
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	LCNNPTPQFGGK	LC(UniMod:4)NNPTPQFGGK	2	LC(UniMod:4)NNPTPQFGGK2	148886	163786	142269
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	LCNNPTPQFGGK	LC(UniMod:4)NNPTPQFGGK	3	LC(UniMod:4)NNPTPQFGGK3	447098	575555	675754
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	LCNSLEESIR	LC(UniMod:4)NSLEESIR	2	LC(UniMod:4)NSLEESIR2	22483	30191.3	25864.5
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	LCNSPSPQMNGK	LC(UniMod:4)NSPSPQMNGK	2	LC(UniMod:4)NSPSPQMNGK2	344795	301705	303522
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	LCNSPSPQMNGKPCEGEAR	LC(UniMod:4)NSPSPQMNGKPC(UniMod:4)EGEAR	3	LC(UniMod:4)NSPSPQMNGKPC(UniMod:4)EGEAR3	37566.8	1.65229e+07	33383.3
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	LCNSPSPQMNGKPCEGEAR	LC(UniMod:4)NSPSPQMNGKPC(UniMod:4)EGEAR	4	LC(UniMod:4)NSPSPQMNGKPC(UniMod:4)EGEAR4	7012.13	9315.49	9431.46
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	LCNSPSPQMNGKPCEGEARETK	LC(UniMod:4)NSPSPQMNGKPC(UniMod:4)EGEARETK	4	LC(UniMod:4)NSPSPQMNGKPC(UniMod:4)EGEARETK4	9986.7	31891.2	15582.7
D4A2G6	D4A2G6	D4A2G6_RAT	Thbs2	Thrombospondin 2	1	LCNSPVPQMGGK	LC(UniMod:4)NSPVPQMGGK	2	LC(UniMod:4)NSPVPQMGGK2	20056.7	23875.5	16452.7
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	LCNSVFSMAAR	LC(UniMod:4)NSVFSMAAR	2	LC(UniMod:4)NSVFSMAAR2	5512.54	5757.76	4147.83
M0RCA3	M0RCA3	M0RCA3_RAT	Zfpl1	Zinc finger protein-like 1	1	LCNTPLASR	LC(UniMod:4)NTPLASR	2	LC(UniMod:4)NTPLASR2	30166.1	28641.9	42044.1
Q0Z843	Q0Z843	Q0Z843_RAT	Fig4	FIG4 phosphoinositide 5-phosphatase	1	LCNVLDR	LC(UniMod:4)NVLDR	2	LC(UniMod:4)NVLDR2	15308.4		6174.61
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	LCNWVSR	LC(UniMod:4)NWVSR	2	LC(UniMod:4)NWVSR2	11474.7	12434.2	9108.24
A0A0G2JVP5	A0A0G2JVP5	A0A0G2JVP5_RAT	Paip1	Poly(A) binding protein interacting protein 1	1	LCNYLSHHLTISPQSGNFR	LC(UniMod:4)NYLSHHLTISPQSGNFR	3	LC(UniMod:4)NYLSHHLTISPQSGNFR3	8816.75	1882.54	2350.88
A0A0G2JVP5	A0A0G2JVP5	A0A0G2JVP5_RAT	Paip1	Poly(A) binding protein interacting protein 1	1	LCNYLSHHLTISPQSGNFR	LC(UniMod:4)NYLSHHLTISPQSGNFR	4	LC(UniMod:4)NYLSHHLTISPQSGNFR4	51029.2	30165.2	22003.9
A0A0U1RRP3	A0A0U1RRP3	A0A0U1RRP3_RAT	Upf3b	UPF3B, regulator of nonsense mediated mRNA decay	1	LCPADDSIKPGDSPVEK	LC(UniMod:4)PADDSIKPGDSPVEK	3	LC(UniMod:4)PADDSIKPGDSPVEK3	33326.6	27875.6	
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	LCPFLEDHK	LC(UniMod:4)PFLEDHK	3	LC(UniMod:4)PFLEDHK3	7468.68	16626.4	13405.5
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	LCPGDQYEVLMR	LC(UniMod:4)PGDQYEVLMR	2	LC(UniMod:4)PGDQYEVLMR2	103331	87136.6	111834
Q6MG61	Q6MG61	CLIC1_RAT	Clic1	Chloride intracellular channel protein 1	1	LCPGGQLPFLLYGTEVHTDTNK	LC(UniMod:4)PGGQLPFLLYGTEVHTDTNK	3	LC(UniMod:4)PGGQLPFLLYGTEVHTDTNK3	153764	134917	119350
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	LCPHVMPMLEEALR	LC(UniMod:4)PHVMPMLEEALR	3	LC(UniMod:4)PHVMPMLEEALR3	5836.21	11938.8	8015.77
A0A8I5ZQE9	A0A8I5ZQE9	A0A8I5ZQE9_RAT	Irf9	Interferon regulatory factor 9	1	LCPIPISWNAPEAPPGPGPHLLPSNK	LC(UniMod:4)PIPISWNAPEAPPGPGPHLLPSNK	3	LC(UniMod:4)PIPISWNAPEAPPGPGPHLLPSNK3			2237.08
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	LCPNSTGAEIR	LC(UniMod:4)PNSTGAEIR	2	LC(UniMod:4)PNSTGAEIR2	122824	135409	165073
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	LCPPELPIPGSGLPPPR	LC(UniMod:4)PPELPIPGSGLPPPR	3	LC(UniMod:4)PPELPIPGSGLPPPR3	6868.34	6397.61	4273.34
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	LCPSREDFPLIETEDK	LC(UniMod:4)PSREDFPLIETEDK	2	LC(UniMod:4)PSREDFPLIETEDK2	2553.4	2225.94	5466.09
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	LCPSREDFPLIETEDK	LC(UniMod:4)PSREDFPLIETEDK	3	LC(UniMod:4)PSREDFPLIETEDK3	147214	139759	155695
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	LCPTHADSLNNLANIK	LC(UniMod:4)PTHADSLNNLANIK	3	LC(UniMod:4)PTHADSLNNLANIK3	56366.3	49754.2	49850.9
Q9WUD2	Q9WUD2	TRPV2_RAT	Trpv2	Transient receptor potential cation channel subfamily V member 2	1	LCPTVQLEEISNHQGLTPLK	LC(UniMod:4)PTVQLEEISNHQGLTPLK	3	LC(UniMod:4)PTVQLEEISNHQGLTPLK3	54448.8	53568.2	60191.6
B1WBV0	B1WBV0	CTU1_RAT	Ctu1	Cytoplasmic tRNA 2-thiolation protein 1	1	LCQACALLDGLNR	LC(UniMod:4)QAC(UniMod:4)ALLDGLNR	2	LC(UniMod:4)QAC(UniMod:4)ALLDGLNR2		955.399	1339.88
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	LCQAFENGK	LC(UniMod:4)QAFENGK	2	LC(UniMod:4)QAFENGK2	100238	130711	144123
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	LCQAFENGKELVELSQASPHDISNVLK	LC(UniMod:4)QAFENGKELVELSQASPHDISNVLK	4	LC(UniMod:4)QAFENGKELVELSQASPHDISNVLK4		4917.73	
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	LCQDIDECETGAHQCSEAQTCVNFHGGYR	LC(UniMod:4)QDIDEC(UniMod:4)ETGAHQC(UniMod:4)SEAQTC(UniMod:4)VNFHGGYR	4	LC(UniMod:4)QDIDEC(UniMod:4)ETGAHQC(UniMod:4)SEAQTC(UniMod:4)VNFHGGYR4	5720.59	10256.2	5938.45
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	LCQDYDTIGPEGGSLR	LC(UniMod:4)QDYDTIGPEGGSLR	2	LC(UniMod:4)QDYDTIGPEGGSLR2	10240.8	7144.45	6573.75
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	LCQEGHAVVVNILIGR	LC(UniMod:4)QEGHAVVVNILIGR	2	LC(UniMod:4)QEGHAVVVNILIGR2	2079		2463.63
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	LCQEGHAVVVNILIGR	LC(UniMod:4)QEGHAVVVNILIGR	3	LC(UniMod:4)QEGHAVVVNILIGR3	2317.05	2971.28	
P37285	Q5PQM2;P37285	KLC1_RAT	Klc1	Kinesin light chain 1	0	LCQENQWLR	LC(UniMod:4)QENQWLR	2	LC(UniMod:4)QENQWLR2	39287.6	25040.6	20699.8
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	LCQENQWLRDELAGTQQR	LC(UniMod:4)QENQWLRDELAGTQQR	3	LC(UniMod:4)QENQWLRDELAGTQQR3	10423.3	13143.2	4287.64
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	LCQENQWLRDELANTQQK	LC(UniMod:4)QENQWLRDELANTQQK	3	LC(UniMod:4)QENQWLRDELANTQQK3	38131.8	24967.9	34076.4
A0A0G2K2T1	A0A0G2K2T1	A0A0G2K2T1_RAT	Txlnb	Taxilin beta	1	LCQENTELAEK	LC(UniMod:4)QENTELAEK	2	LC(UniMod:4)QENTELAEK2	4128.8	6885.26	
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	LCQEVTNR	LC(UniMod:4)QEVTNR	2	LC(UniMod:4)QEVTNR2	133372	127028	118835
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	LCQFAGVSR	LC(UniMod:4)QFAGVSR	2	LC(UniMod:4)QFAGVSR2	782307	782161	701094
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	LCQGLFFR	LC(UniMod:4)QGLFFR	2	LC(UniMod:4)QGLFFR2	289451	298309	238821
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	LCQIPVLGASMPK	LC(UniMod:4)QIPVLGASMPK	2	LC(UniMod:4)QIPVLGASMPK2	877761	981078	907931
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	LCQIPVLGASMPK	LC(UniMod:4)QIPVLGASMPK	3	LC(UniMod:4)QIPVLGASMPK3	3943.56	6680.93	5080.98
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	LCQLCSGK	LC(UniMod:4)QLC(UniMod:4)SGK	1	LC(UniMod:4)QLC(UniMod:4)SGK1	1545.76	1825.89	1092.95
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	LCQLCSGK	LC(UniMod:4)QLC(UniMod:4)SGK	2	LC(UniMod:4)QLC(UniMod:4)SGK2	224543	189267	154690
Q9R1Z0	Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	1	LCQNNFALGYK	LC(UniMod:4)QNNFALGYK	2	LC(UniMod:4)QNNFALGYK2	736975	666332	865150
Q9R1Z0	Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	1	LCQNNFALGYK	LC(UniMod:4)QNNFALGYK	3	LC(UniMod:4)QNNFALGYK3	5873.13	2730.45	6163.41
D3ZED8	D3ZED8	D3ZED8_RAT	Pmel	Premelanosome protein	1	LCQPVPPSPDCQLVLHQILK	LC(UniMod:4)QPVPPSPDC(UniMod:4)QLVLHQILK	3	LC(UniMod:4)QPVPPSPDC(UniMod:4)QLVLHQILK3	827707	685374	843765
B2GUX8	B2GUX8	B2GUX8_RAT	Sh3bp5l	SH3 domain-binding protein 5	1	LCQQAEAR	LC(UniMod:4)QQAEAR	2	LC(UniMod:4)QQAEAR2			23597.5
Q8R4Z9	Q8R4Z9	MFN1_RAT	Mfn1	Mitofusin-1	1	LCQQVDVTQK	LC(UniMod:4)QQVDVTQK	2	LC(UniMod:4)QQVDVTQK2	7388.13	7396.4	1008.48
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	LCQSLGELCPHLK	LC(UniMod:4)QSLGELC(UniMod:4)PHLK	3	LC(UniMod:4)QSLGELC(UniMod:4)PHLK3	8534.21	4035.39	4676.57
A0A0U5J4Y0	A0A0U5J4Y0	A0A0U5J4Y0_RAT	Tnfsf12	TNF superfamily member 12	1	LCQVSGLLPLRPGSSLR	LC(UniMod:4)QVSGLLPLRPGSSLR	3	LC(UniMod:4)QVSGLLPLRPGSSLR3	15527.7	7248.16	22466
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	LCRPCQCNDNIDPNAVGNCNR	LC(UniMod:4)RPC(UniMod:4)QC(UniMod:4)NDNIDPNAVGNC(UniMod:4)NR	3	LC(UniMod:4)RPC(UniMod:4)QC(UniMod:4)NDNIDPNAVGNC(UniMod:4)NR3	243035	290133	283021
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	LCSAHGVLVPGGFGVR	LC(UniMod:4)SAHGVLVPGGFGVR	2	LC(UniMod:4)SAHGVLVPGGFGVR2	14615.8	17556.7	14475.8
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	LCSAHGVLVPGGFGVR	LC(UniMod:4)SAHGVLVPGGFGVR	3	LC(UniMod:4)SAHGVLVPGGFGVR3	706449	737204	699116
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	LCSDFLK	LC(UniMod:4)SDFLK	2	LC(UniMod:4)SDFLK2	200623	180943	161136
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	LCSDIHDTLGHMLSSLAVEK	LC(UniMod:4)SDIHDTLGHMLSSLAVEK	3	LC(UniMod:4)SDIHDTLGHMLSSLAVEK3	5048.14		
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	LCSDPEGGLSK	LC(UniMod:4)SDPEGGLSK	2	LC(UniMod:4)SDPEGGLSK2	37052.1	33252.7	32117.1
A0A8I6A895	A0A8I6A895	A0A8I6A895_RAT	Zmym3	Zinc finger MYM-type containing 3	1	LCSDSCFSK	LC(UniMod:4)SDSC(UniMod:4)FSK	2	LC(UniMod:4)SDSC(UniMod:4)FSK2	21844.1	16900.4	13376.1
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	LCSFVDK	LC(UniMod:4)SFVDK	2	LC(UniMod:4)SFVDK2	135685	184121	153716
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	LCSGLFER	LC(UniMod:4)SGLFER	2	LC(UniMod:4)SGLFER2	39439.9	29661.4	29916.6
A0A8I6AK45	A0A8I6AK45	A0A8I6AK45_RAT	Mtch2	Mitochondrial carrier 2	1	LCSGVLGTVVHGK	LC(UniMod:4)SGVLGTVVHGK	2	LC(UniMod:4)SGVLGTVVHGK2	15637.7	15343.9	7971.15
A0A8I6AK45	A0A8I6AK45	A0A8I6AK45_RAT	Mtch2	Mitochondrial carrier 2	1	LCSGVLGTVVHGK	LC(UniMod:4)SGVLGTVVHGK	3	LC(UniMod:4)SGVLGTVVHGK3	145440	175957	132020
P97697	P97697	IMPA1_RAT	Impa1	Inositol monophosphatase 1	1	LCSIPIHGIR	LC(UniMod:4)SIPIHGIR	3	LC(UniMod:4)SIPIHGIR3	61079.4	32078.8	29366.5
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	LCSLDNGDCDQFCR	LC(UniMod:4)SLDNGDC(UniMod:4)DQFC(UniMod:4)R	2	LC(UniMod:4)SLDNGDC(UniMod:4)DQFC(UniMod:4)R2	3.08223e+06	2.83026e+06	2.72065e+06
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	LCSLDNGDCDQFCR	LC(UniMod:4)SLDNGDC(UniMod:4)DQFC(UniMod:4)R	3	LC(UniMod:4)SLDNGDC(UniMod:4)DQFC(UniMod:4)R3	837825	818634	786429
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	LCSLDNGDCDQFCREEQNSVVCSCAK	LC(UniMod:4)SLDNGDC(UniMod:4)DQFC(UniMod:4)REEQNSVVC(UniMod:4)SC(UniMod:4)AK	4	LC(UniMod:4)SLDNGDC(UniMod:4)DQFC(UniMod:4)REEQNSVVC(UniMod:4)SC(UniMod:4)AK4	71726.6	75702.3	81033.5
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	LCSLLDSEDYNTCEGAFGALQK	LC(UniMod:4)SLLDSEDYNTC(UniMod:4)EGAFGALQK	3	LC(UniMod:4)SLLDSEDYNTC(UniMod:4)EGAFGALQK3	6463.48	11030.1	10036.8
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	LCSLSQGNLSLNWPR	LC(UniMod:4)SLSQGNLSLNWPR	2	LC(UniMod:4)SLSQGNLSLNWPR2	38509.4	31028.8	39456.1
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	LCSLSQGNLSLNWPR	LC(UniMod:4)SLSQGNLSLNWPR	3	LC(UniMod:4)SLSQGNLSLNWPR3	12205	9695.38	10323.4
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	LCSLSSQTESSSSEK	LC(UniMod:4)SLSSQTESSSSEK	2	LC(UniMod:4)SLSSQTESSSSEK2	6270.21	8916.71	8726.07
P36876	P56932;P36877;P36876	2ABA_RAT	Ppp2r2a	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	0	LCSLYENDCIFDK	LC(UniMod:4)SLYENDC(UniMod:4)IFDK	2	LC(UniMod:4)SLYENDC(UniMod:4)IFDK2	28501.5	22977.8	27343.8
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	LCSQAAEELITR	LC(UniMod:4)SQAAEELITR	2	LC(UniMod:4)SQAAEELITR2	190243	227418	181837
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	LCSQAAEELITR	LC(UniMod:4)SQAAEELITR	3	LC(UniMod:4)SQAAEELITR3	9821.92	13106.7	14057
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	LCSQLEQLELENR	LC(UniMod:4)SQLEQLELENR	3	LC(UniMod:4)SQLEQLELENR3	3222.6	2999.25	5447.84
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	LCSSADVDMIQLQLK	LC(UniMod:4)SSADVDMIQLQLK	2	LC(UniMod:4)SSADVDMIQLQLK2	4836.52	5325.17	
Q03346	Q03346	MPPB_RAT	Pmpcb	Mitochondrial-processing peptidase subunit beta	1	LCTAVSESEVAR	LC(UniMod:4)TAVSESEVAR	2	LC(UniMod:4)TAVSESEVAR2	12215.7	12566.7	15356.5
Q07205	Q07205;A0A8I6ADE0;A0A8I6AVQ3;A0A8I5ZMQ1	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	LCTFILK	LC(UniMod:4)TFILK	2	LC(UniMod:4)TFILK2	70959.9	72426.5	92700.7
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	LCTFTITQK	LC(UniMod:4)TFTITQK	2	LC(UniMod:4)TFTITQK2	29239.8	35984.3	31852.2
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	LCTLDGK	LC(UniMod:4)TLDGK	2	LC(UniMod:4)TLDGK2	17663.3	17719.2	20889.4
A0A8I6A9E8	A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	1	LCTMGPGK	LC(UniMod:4)TMGPGK	2	LC(UniMod:4)TMGPGK2	15879.5	15365.6	14243.5
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LCTMPPVGTDLNTVK	LC(UniMod:4)TMPPVGTDLNTVK	2	LC(UniMod:4)TMPPVGTDLNTVK2	34343.9	42752.7	26891.6
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	LCTNNIHCQFFTYATK	LC(UniMod:4)TNNIHC(UniMod:4)QFFTYATK	3	LC(UniMod:4)TNNIHC(UniMod:4)QFFTYATK3	258072	210826	217580
B0BNN4	B0BNN4	B0BNN4_RAT	Cfp	Complement factor properdin	1	LCTPLLPK	LC(UniMod:4)TPLLPK	2	LC(UniMod:4)TPLLPK2	183774	153395	166494
P58751	P58751	RELN_RAT	Reln	Reelin	1	LCTPYMDTTGYGNLR	LC(UniMod:4)TPYMDTTGYGNLR	2	LC(UniMod:4)TPYMDTTGYGNLR2	127410	142510	128481
P58751	P58751	RELN_RAT	Reln	Reelin	1	LCTPYMDTTGYGNLR	LC(UniMod:4)TPYMDTTGYGNLR	3	LC(UniMod:4)TPYMDTTGYGNLR3	17189.8	18167.2	21706
Q68FY0	Q68FY0	QCR1_RAT	Uqcrc1	Cytochrome b-c1 complex subunit 1, mitochondrial	1	LCTSATESEVTR	LC(UniMod:4)TSATESEVTR	2	LC(UniMod:4)TSATESEVTR2	258567	188642	212903
Q62931	Q62931	GOSR1_RAT	Gosr1	Golgi SNAP receptor complex member 1	1	LCTSYSHSSAR	LC(UniMod:4)TSYSHSSAR	2	LC(UniMod:4)TSYSHSSAR2	5542.23	10334.2	3728.82
Q62931	Q62931	GOSR1_RAT	Gosr1	Golgi SNAP receptor complex member 1	1	LCTSYSHSSAR	LC(UniMod:4)TSYSHSSAR	3	LC(UniMod:4)TSYSHSSAR3	51892.8	41291.4	47121.1
Q78E14	Q78E14	Q78E14_RAT	Obp3	Alpha-2u globulin PGCL4	1	LCVAHGITR	LC(UniMod:4)VAHGITR	2	LC(UniMod:4)VAHGITR2	5311.88	5476.44	
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	LCVFFGR	LC(UniMod:4)VFFGR	2	LC(UniMod:4)VFFGR2	20912.5	15819.5	12881.7
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	LCVGSLHWLEEAEK	LC(UniMod:4)VGSLHWLEEAEK	3	LC(UniMod:4)VGSLHWLEEAEK3	56977.3	46784.9	71580.8
Q6DGG0	M0RB67;Q6DGG0	PPID_RAT	Ppid	Peptidyl-prolyl cis-trans isomerase D	0	LCVIAECGELK	LC(UniMod:4)VIAEC(UniMod:4)GELK	2	LC(UniMod:4)VIAEC(UniMod:4)GELK2	2492.25	11390.7	9230.46
P02770	P02770	ALBU_RAT	Alb	Albumin	1	LCVLHEK	LC(UniMod:4)VLHEK	1	LC(UniMod:4)VLHEK1	37613.7	30608.2	24594
P02770	P02770	ALBU_RAT	Alb	Albumin	1	LCVLHEK	LC(UniMod:4)VLHEK	2	LC(UniMod:4)VLHEK2	2.79131e+06	2.59223e+06	2.26191e+06
B5DFN2	D3ZWL6;B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	0	LCVPAMNVNDSVTK	LC(UniMod:4)VPAMNVNDSVTK	2	LC(UniMod:4)VPAMNVNDSVTK2	201635	238393	226125
B5DFN2	D3ZWL6;B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	0	LCVPAMNVNDSVTK	LC(UniMod:4)VPAMNVNDSVTK	3	LC(UniMod:4)VPAMNVNDSVTK3	3840.39	3634.71	4482.97
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	LCVSDVFK	LC(UniMod:4)VSDVFK	2	LC(UniMod:4)VSDVFK2	20204.4		24636.8
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	LCVSDVFKDQGSGFCVTGK	LC(UniMod:4)VSDVFKDQGSGFC(UniMod:4)VTGK	3	LC(UniMod:4)VSDVFKDQGSGFC(UniMod:4)VTGK3	10185.6	3230.6	8359.34
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	LCWYDYVEVR	LC(UniMod:4)WYDYVEVR	2	LC(UniMod:4)WYDYVEVR2	14005.5	13488	11208.4
P68136	P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	LCYVALDFENEMATAASSSSLEK	LC(UniMod:4)YVALDFENEMATAASSSSLEK	3	LC(UniMod:4)YVALDFENEMATAASSSSLEK3	33405	38967.1	33284.5
P60711	P60711;P63259;A0A8I5Y704	ACTB_RAT	Actb	Actin, cytoplasmic 1	0	LCYVALDFEQEMATAASSSSLEK	LC(UniMod:4)YVALDFEQEMATAASSSSLEK	3	LC(UniMod:4)YVALDFEQEMATAASSSSLEK3	2.13511e+06	2.04339e+06	2.20835e+06
P60711	P60711;P63259;A0A8I5Y704	ACTB_RAT	Actb	Actin, cytoplasmic 1	0	LCYVALDFEQEMATAASSSSLEK	LC(UniMod:4)YVALDFEQEMATAASSSSLEK	4	LC(UniMod:4)YVALDFEQEMATAASSSSLEK4	15286.4	24087.3	21182.4
Q5M7U6	Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	1	LCYVGYNIEQEQK	LC(UniMod:4)YVGYNIEQEQK	2	LC(UniMod:4)YVGYNIEQEQK2	148411	141100	187792
Q5M7U6	Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	1	LCYVGYNIEQEQK	LC(UniMod:4)YVGYNIEQEQK	3	LC(UniMod:4)YVGYNIEQEQK3	55008.8	57773.8	48513.9
P0C5H9	P0C5H9	MANF_RAT	Manf	Mesencephalic astrocyte-derived neurotrophic factor	1	LCYYIGATDDAATK	LC(UniMod:4)YYIGATDDAATK	2	LC(UniMod:4)YYIGATDDAATK2	8944.94	5597.25	3983.09
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	LDACLELLIR	LDAC(UniMod:4)LELLIR	2	LDAC(UniMod:4)LELLIR2	2860.96	2260.24	1614.4
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	LDADAVSPTVSQLSAVFEK	LDADAVSPTVSQLSAVFEK	3	LDADAVSPTVSQLSAVFEK3	7038.21	5535.54	10295.2
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	LDADHLR	LDADHLR	2	LDADHLR2	17563.8	28153.2	26054.3
D4A8B0	D4A8B0	D4A8B0_RAT	Sec14l5	SEC14-like lipid binding 5	1	LDADYIER	LDADYIER	2	LDADYIER2	22263.1	14910.9	23875.5
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	LDAELIQYR	LDAELIQYR	2	LDAELIQYR2	37028.3	36177.7	36758.1
Q4QQV8	Q4QQV8	CHMP5_RAT	Chmp5	Charged multivesicular body protein 5	1	LDAELVK	LDAELVK	2	LDAELVK2	242995	270532	232714
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	LDAESDLQLAQIK	LDAESDLQLAQIK	2	LDAESDLQLAQIK2	7270.69	7957.7	10793.2
D3ZY51	D3ZY51	D3ZY51_RAT	Pkp1	Plakophilin 1	1	LDAEVPTR	LDAEVPTR	2	LDAEVPTR2	17757.8	19059.6	9775.4
Q9WUQ1	Q9WUQ1	ATS1_RAT	Adamts1	A disintegrin and metalloproteinase with thrombospondin motifs 1	1	LDAFGQQLHLK	LDAFGQQLHLK	3	LDAFGQQLHLK3	2906.28	1689.61	4077.74
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	LDAFIEALHQEK	LDAFIEALHQEK	2	LDAFIEALHQEK2	30422.7	21951.5	18618.5
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	LDAFIEALHQEK	LDAFIEALHQEK	3	LDAFIEALHQEK3	75926.9	70337.2	83724.6
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	LDAFVLSYVAALPAAALWHK	LDAFVLSYVAALPAAALWHK	3	LDAFVLSYVAALPAAALWHK3		12730.4	
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	LDAFWLK	LDAFWLK	2	LDAFWLK2	28784.7	35136.2	30040.5
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	LDAGFYR	LDAGFYR	2	LDAGFYR2	16398.2	16970.1	11781.2
Q3ZAU4	Q3ZAU4	Q3ZAU4_RAT	Kazald1	Kazal-type serine peptidase inhibitor domain 1	1	LDAGGDLSR	LDAGGDLSR	2	LDAGGDLSR2	122094	115998	106546
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	LDAGHPVYQVSEVEK	LDAGHPVYQVSEVEK	3	LDAGHPVYQVSEVEK3	3026.4	3894.16	5226.24
Q08603	Q08603	PGTB2_RAT	Rabggtb	Geranylgeranyl transferase type-2 subunit beta	1	LDAINVEK	LDAINVEK	2	LDAINVEK2	7112.88		
F1LXD8	F1LXD8	F1LXD8_RAT	Emilin2	Elastin microfibril interfacer 2	1	LDAISGSLQR	LDAISGSLQR	2	LDAISGSLQR2	11814.5	12991.4	10878.3
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	LDALCNIHENIR	LDALC(UniMod:4)NIHENIR	2	LDALC(UniMod:4)NIHENIR2	12650.7	12686.3	10532.7
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	LDALCNIHENIR	LDALC(UniMod:4)NIHENIR	3	LDALC(UniMod:4)NIHENIR3	197776	244128	247427
A0A8I5ZUE7	A0A8I5ZUE7	A0A8I5ZUE7_RAT	Zc3h7b	Zinc finger CCCH-type containing 7B	1	LDALDSFGSAR	LDALDSFGSAR	2	LDALDSFGSAR2	9309.36	10061.4	12647.3
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	LDALEWESCFNK	LDALEWESC(UniMod:4)FNK	2	LDALEWESC(UniMod:4)FNK2	11401.7	3316.15	9851.05
Q6AY63	Q6AY63	NUDT5_RAT	Nudt5	ADP-sugar pyrophosphatase	1	LDALGAEDR	LDALGAEDR	2	LDALGAEDR2	22238.1	18527.4	18189.6
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	LDALQDTGMNHHLLLK	LDALQDTGMNHHLLLK	2	LDALQDTGMNHHLLLK2	3433.93	3360.99	
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	LDALQDTGMNHHLLLK	LDALQDTGMNHHLLLK	3	LDALQDTGMNHHLLLK3	60392.9	62271.5	62447.5
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	LDALQDTGMNHHLLLK	LDALQDTGMNHHLLLK	4	LDALQDTGMNHHLLLK4	136745	141486	110785
Q6AYD4	Q6AYD4	ESAM_RAT	Esam	Endothelial cell-selective adhesion molecule	1	LDALQEGDSGTYR	LDALQEGDSGTYR	2	LDALQEGDSGTYR2	220622	240937	231545
A0A8I6ATH0	A0A8I6ATH0	A0A8I6ATH0_RAT	Braf	non-specific serine/threonine protein kinase	1	LDALQQR	LDALQQR	2	LDALQQR2	103184	117820	117196
A0A8I6A282	A0A8I6A282	A0A8I6A282_RAT	Antxr2	Anthrax toxin receptor	1	LDALWALILK	LDALWALILK	2	LDALWALILK2	3629.94	3535.05	3034.36
Q0PMD2	Q0PMD2	ANTR1_RAT	Antxr1	Anthrax toxin receptor 1	1	LDALWVLLR	LDALWVLLR	2	LDALWVLLR2	15417.8	25258.3	22420.5
P0C588	Q5U2P1;P0C588	CNNM4_RAT	Cnnm4	Metal transporter CNNM4	0	LDAMLEEFK	LDAMLEEFK	2	LDAMLEEFK2	2622.7	1482.44	5242.74
Q9Z2H4	Q9Z2H4	LGR4_RAT	Lgr4	Leucine-rich repeat-containing G-protein coupled receptor 4	1	LDANHITSVPEDSFEGLVQLR	LDANHITSVPEDSFEGLVQLR	3	LDANHITSVPEDSFEGLVQLR3	5007.61	5377.13	5140.02
Q68HB8	Q68HB8	Q68HB8_RAT	Pcdh7	Protocadherin 7	1	LDAPEGGGGTGPSGR	LDAPEGGGGTGPSGR	2	LDAPEGGGGTGPSGR2	13318.5	9136.04	5200.16
Q63616	Q63616	VP33B_RAT	Vps33b	Vacuolar protein sorting-associated protein 33B	1	LDAPELPDFSMLK	LDAPELPDFSMLK	2	LDAPELPDFSMLK2	12229.5	11688.1	12797.4
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	LDAPSQIEVR	LDAPSQIEVR	2	LDAPSQIEVR2	1.68776e+06	2.03197e+06	1.82783e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	LDAPTNLQFVNETDR	LDAPTNLQFVNETDR	2	LDAPTNLQFVNETDR2	4877.63	7243.23	6712.24
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	LDAQASFLSK	LDAQASFLSK	2	LDAQASFLSK2	1.04777e+06	1.06458e+06	888013
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	LDAQASFLSKELAAQTIK	LDAQASFLSKELAAQTIK	3	LDAQASFLSKELAAQTIK3	8833.18	10564.2	17174.2
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	LDAQASFLSKELAAQTIKK	LDAQASFLSKELAAQTIKK	3	LDAQASFLSKELAAQTIKK3	4233.49	9135.53	10601.6
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	LDAQASFLSKELAAQTIKK	LDAQASFLSKELAAQTIKK	4	LDAQASFLSKELAAQTIKK4	6261.05	9843.87	14745.1
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	LDAQSLNLSQEDFDR	LDAQSLNLSQEDFDR	2	LDAQSLNLSQEDFDR2	12589.6	12403.1	19481.7
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	LDAQSLNLSQEDFDRYMSGQTSPR	LDAQSLNLSQEDFDRYMSGQTSPR	3	LDAQSLNLSQEDFDRYMSGQTSPR3	90836	93285.8	83264.3
Q5RKI8	Q5RKI8	MITOS_RAT	Abcb8	Mitochondrial potassium channel ATP-binding subunit	1	LDASDEEVYTAAR	LDASDEEVYTAAR	2	LDASDEEVYTAAR2	2212.64		3616.11
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	LDASESLR	LDASESLR	2	LDASESLR2	961934	893958	936495
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	LDASESLRK	LDASESLRK	2	LDASESLRK2	73429.9	68781.8	78972.1
D4ACK7	D4ACK7	D4ACK7_RAT	Cnnm3	Metal transporter	1	LDAVLEEFKR	LDAVLEEFKR	3	LDAVLEEFKR3	4873.69	3782.74	
D4A589	D4A589	D4A589_RAT	Smg6	Telomerase-binding protein EST1A	1	LDAVYYYMR	LDAVYYYMR	2	LDAVYYYMR2	2655.01	5624.58	
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	LDCAQLK	LDC(UniMod:4)AQLK	2	LDC(UniMod:4)AQLK2	76541.8	93213.4	103332
Q5XIK5	Q5XIK5	RN146_RAT	Rnf146	E3 ubiquitin-protein ligase RNF146	1	LDCDSNTVNLAR	LDC(UniMod:4)DSNTVNLAR	2	LDC(UniMod:4)DSNTVNLAR2		8835.3	
A0A8I5ZLY6	A0A8I5ZLY6	A0A8I5ZLY6_RAT	RGD1564129	N-terminal Ras-GEF domain-containing protein	1	LDCEEDEQIK	LDC(UniMod:4)EEDEQIK	2	LDC(UniMod:4)EEDEQIK2	2216.22	3852.26	
Q6Q0N0	Q6Q0N0	CSTN1_RAT	Clstn1	Calsyntenin-1	1	LDCELQK	LDC(UniMod:4)ELQK	2	LDC(UniMod:4)ELQK2	21734	17620.2	11318.7
P35284	P35284	RAB12_RAT	Rab12	Ras-related protein Rab-12	1	LDCETDREISR	LDC(UniMod:4)ETDREISR	2	LDC(UniMod:4)ETDREISR2	3576.92	3168.56	
P35284	P35284	RAB12_RAT	Rab12	Ras-related protein Rab-12	1	LDCETDREISR	LDC(UniMod:4)ETDREISR	3	LDC(UniMod:4)ETDREISR3	100886	120085	110192
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	LDCFLVYFQR	LDC(UniMod:4)FLVYFQR	2	LDC(UniMod:4)FLVYFQR2			10814.2
D4ACD2	D4ACD2	D4ACD2_RAT	Bach1	BTB domain and CNC homolog 1	1	LDCIQNLESEIEK	LDC(UniMod:4)IQNLESEIEK	2	LDC(UniMod:4)IQNLESEIEK2	10968.8	7642.07	15419.7
B5DEN9	B5DEN9	VPS28_RAT	Vps28	Vacuolar protein sorting-associated protein 28 homolog	1	LDCPLAMER	LDC(UniMod:4)PLAMER	2	LDC(UniMod:4)PLAMER2	57284.7	40054.4	58054.8
Q05695	Q05695	L1CAM_RAT	L1cam	Neural cell adhesion molecule L1	1	LDCQVQGR	LDC(UniMod:4)QVQGR	2	LDC(UniMod:4)QVQGR2	24008.3	11570.3	16590.9
Q05695	Q05695	L1CAM_RAT	L1cam	Neural cell adhesion molecule L1	1	LDCQVQGRPQPEVTWR	LDC(UniMod:4)QVQGRPQPEVTWR	3	LDC(UniMod:4)QVQGRPQPEVTWR3	8304.45	18680.9	7595.99
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	LDCSPSGHWTGSPPMCEAIK	LDC(UniMod:4)SPSGHWTGSPPMC(UniMod:4)EAIK	3	LDC(UniMod:4)SPSGHWTGSPPMC(UniMod:4)EAIK3	252609	233072	193685
A0A8I6GM43	A0A8I6GM43	A0A8I6GM43_RAT	Pbdc1	Polysaccharide biosynthesis domain containing 1	1	LDCSQGYTEENTIFAPR	LDC(UniMod:4)SQGYTEENTIFAPR	3	LDC(UniMod:4)SQGYTEENTIFAPR3	7820.91	11026.9	14677
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	LDCTQCLQHPWLMK	LDC(UniMod:4)TQC(UniMod:4)LQHPWLMK	2	LDC(UniMod:4)TQC(UniMod:4)LQHPWLMK2	11137.6	6394.86	10662.7
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	LDCTQCLQHPWLMK	LDC(UniMod:4)TQC(UniMod:4)LQHPWLMK	3	LDC(UniMod:4)TQC(UniMod:4)LQHPWLMK3	328750	341266	327641
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	LDDAWDLLR	LDDAWDLLR	2	LDDAWDLLR2	25620.1	34910.6	32026.3
P29315	P29315	RINI_RAT	Rnh1	Ribonuclease inhibitor	1	LDDCGLTEVR	LDDC(UniMod:4)GLTEVR	2	LDDC(UniMod:4)GLTEVR2	48635.8	59404.3	68752.6
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	LDDDETFAK	LDDDETFAK	2	LDDDETFAK2	47729.9	51575.6	58388
O35964	O35964	SH3G1_RAT	Sh3gl1	Endophilin-A2	1	LDDDFREMEK	LDDDFREMEK	2	LDDDFREMEK2	1792.89	2052.24	4588.29
O35964	O35964	SH3G1_RAT	Sh3gl1	Endophilin-A2	1	LDDDFREMEK	LDDDFREMEK	3	LDDDFREMEK3	146561	163668	145981
O35964	O35964	SH3G1_RAT	Sh3gl1	Endophilin-A2	1	LDDDFREMEKK	LDDDFREMEKK	3	LDDDFREMEKK3	18093.2	23343.3	14464.4
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	LDDDSER	LDDDSER	2	LDDDSER2			51255.2
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	LDDFTEDGR	LDDFTEDGR	2	LDDFTEDGR2	13944	14754.3	22943.3
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	LDDGDYLCDDGCHNSCPSCTPGQMQHYK	LDDGDYLC(UniMod:4)DDGC(UniMod:4)HNSC(UniMod:4)PSC(UniMod:4)TPGQMQHYK	4	LDDGDYLC(UniMod:4)DDGC(UniMod:4)HNSC(UniMod:4)PSC(UniMod:4)TPGQMQHYK4	699890	759492	836169
B4F7A3	B4F7A3	B4F7A3_RAT	Lgalsl	Galectin-like	1	LDDGHLNNSLGSPVQADVYFPR	LDDGHLNNSLGSPVQADVYFPR	3	LDDGHLNNSLGSPVQADVYFPR3	70036.5	64565.3	45608.9
Q6YDN7	Q6YDN7	CDC26_RAT	Cdc26	Anaphase-promoting complex subunit CDC26	1	LDDIEEFENIR	LDDIEEFENIR	2	LDDIEEFENIR2	9532.76		6977.76
Q6YDN7	Q6YDN7	CDC26_RAT	Cdc26	Anaphase-promoting complex subunit CDC26	1	LDDIEEFENIRK	LDDIEEFENIRK	3	LDDIEEFENIRK3	28575.7	32684.8	43685.5
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	LDDIFEPVLIPEPK	LDDIFEPVLIPEPK	2	LDDIFEPVLIPEPK2	100646	145910	120308
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	LDDIFEPVLIPEPK	LDDIFEPVLIPEPK	3	LDDIFEPVLIPEPK3	3692.11	5013.95	3403.01
D4A435	D4A435	D4A435_RAT	Icam5	Intercellular adhesion molecule 5	1	LDDLDCPR	LDDLDC(UniMod:4)PR	2	LDDLDC(UniMod:4)PR2	2033.46	2323.1	787.793
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	LDDLFLK	LDDLFLK	2	LDDLFLK2	17033.4	10948.9	17555.1
F7ELE5	F7ELE5	F7ELE5_RAT	Ndufs7	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial	1	LDDLINWAR	LDDLINWAR	2	LDDLINWAR2	73185.2	77027.9	74741.1
P08934	A0A0G2KA54;P08934	KNG1_RAT	Kng1	Kininogen-1	0	LDDLKQQR	LDDLKQQR	2	LDDLKQQR2	9816.89	21951.4	16617.5
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	LDDLLAYLPSSDTPLLK	LDDLLAYLPSSDTPLLK	2	LDDLLAYLPSSDTPLLK2	23067.6	28737	25119.4
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	LDDLLAYLPSSDTPLLK	LDDLLAYLPSSDTPLLK	3	LDDLLAYLPSSDTPLLK3	7555.64	6698.6	5825.93
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	LDDLSVLDLSHNQLTECPR	LDDLSVLDLSHNQLTEC(UniMod:4)PR	3	LDDLSVLDLSHNQLTEC(UniMod:4)PR3	393170	462531	435271
Q5EGY4	Q5EGY4	YKT6_RAT	Ykt6	Synaptobrevin homolog YKT6	1	LDDLVSK	LDDLVSK	2	LDDLVSK2	72978	65113.3	64621.7
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	LDDLVSTGK	LDDLVSTGK	2	LDDLVSTGK2	14388.5	14281.4	17482.8
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	LDDLWEDIAYGLHDQGHSQNNPEGHSG	LDDLWEDIAYGLHDQGHSQNNPEGHSG	4	LDDLWEDIAYGLHDQGHSQNNPEGHSG4	275334	256362	346697
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	LDDMINRPR	LDDMINRPR	2	LDDMINRPR2	26821.4	8312.73	16785.2
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LDDMNQR	LDDMNQR	2	LDDMNQR2		246302	
P81795	P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	1	LDDPSCPRPECYR	LDDPSC(UniMod:4)PRPEC(UniMod:4)YR	2	LDDPSC(UniMod:4)PRPEC(UniMod:4)YR2	29101.6		13930.5
P81795	P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	1	LDDPSCPRPECYR	LDDPSC(UniMod:4)PRPEC(UniMod:4)YR	3	LDDPSC(UniMod:4)PRPEC(UniMod:4)YR3	552229	553724	582343
Q5BK26	Q5BK26	PLPL7_RAT	Pnpla7	Patatin-like phospholipase domain-containing protein 7	1	LDDPSLLDGR	LDDPSLLDGR	2	LDDPSLLDGR2		3753.84	6348.43
P23097	P23097	MMP13_RAT	Mmp13	Collagenase 3 (Fragment)	1	LDDPTLDIMR	LDDPTLDIMR	2	LDDPTLDIMR2	6652.76	4818.88	
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	LDDQIFLNR	LDDQIFLNR	2	LDDQIFLNR2	22431	24083.5	22803
C9WPN6	C9WPN6	IF2H_RAT	Eif2s3y	Eukaryotic translation initiation factor 2 subunit 3, Y-linked	1	LDDSSCPRPECYR	LDDSSC(UniMod:4)PRPEC(UniMod:4)YR	3	LDDSSC(UniMod:4)PRPEC(UniMod:4)YR3	73387.7	61799.8	89026.8
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	LDDSYSEAVR	LDDSYSEAVR	2	LDDSYSEAVR2	6610.15	9172.59	5722.07
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	LDDTSQEFSK	LDDTSQEFSK	2	LDDTSQEFSK2	11842.6	7208.4	8284.62
Q8VII0	Q8VII0	FRMD6_RAT	Frmd6	FERM domain-containing protein 6 (Fragment)	1	LDDVAIHYYR	LDDVAIHYYR	3	LDDVAIHYYR3	6085.24	6949.33	
Q66H09	Q66H09	Q66H09_RAT	Ttc1	Tetratricopeptide repeat domain 1	1	LDEALEDYK	LDEALEDYK	2	LDEALEDYK2	16939.7	16937	26128.4
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	LDEANAALDSASR	LDEANAALDSASR	2	LDEANAALDSASR2	11235.6	15867.3	9714.67
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	LDEAQEAECQALR	LDEAQEAEC(UniMod:4)QALR	2	LDEAQEAEC(UniMod:4)QALR2	123102	123201	118498
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	LDEAQEAECQALR	LDEAQEAEC(UniMod:4)QALR	3	LDEAQEAEC(UniMod:4)QALR3	16184.2	20099.7	17003.1
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	LDEAQEAECQVLK	LDEAQEAEC(UniMod:4)QVLK	2	LDEAQEAEC(UniMod:4)QVLK2	28823.9	24663.6	17280.5
P10760	P10760;A0A8I6A7X9	SAHH_RAT	Ahcy	Adenosylhomocysteinase	0	LDEAVAEAHLGK	LDEAVAEAHLGK	2	LDEAVAEAHLGK2	3243.13	1335.25	884.637
P10760	P10760;A0A8I6A7X9	SAHH_RAT	Ahcy	Adenosylhomocysteinase	0	LDEAVAEAHLGK	LDEAVAEAHLGK	3	LDEAVAEAHLGK3	9641.3	6637.53	6052.22
A0A8I5Y868	A0A8I5Y868	A0A8I5Y868_RAT	Klc2	Kinesin light chain	1	LDEDASPNEEK	LDEDASPNEEK	2	LDEDASPNEEK2	8500.82	13900.1	6205.95
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	LDEDLAGYCR	LDEDLAGYC(UniMod:4)R	2	LDEDLAGYC(UniMod:4)R2	12180.3	9556.53	9771.02
Q63632	G3V6N7;Q63632	S12A4_RAT	Slc12a4	Solute carrier family 12 member 4	0	LDEDLHVK	LDEDLHVK	2	LDEDLHVK2	7095.28	2755.34	
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	LDEDSLTK	LDEDSLTK	2	LDEDSLTK2	94618.4	76549.7	73717
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	LDEDSLTKQPEEVFDVLEK	LDEDSLTKQPEEVFDVLEK	3	LDEDSLTKQPEEVFDVLEK3	40618	45980.5	41066.9
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	LDEELEDAEK	LDEELEDAEK	2	LDEELEDAEK2			1309.46
D3ZG58	D3ZG58	D3ZG58_RAT	Zwilch	Protein zwilch	1	LDEFDDSTK	LDEFDDSTK	2	LDEFDDSTK2		7136.71	1583.54
P11507	Q64578;P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	0	LDEFGEQLSK	LDEFGEQLSK	2	LDEFGEQLSK2	73431.4	64747.6	64842.6
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	LDEFSGILR	LDEFSGILR	2	LDEFSGILR2	12759.4	4712.47	5629.21
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	LDEGTVQWIVDQAAAK	LDEGTVQWIVDQAAAK	2	LDEGTVQWIVDQAAAK2			8423.17
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	LDEGTVQWIVDQAAAK	LDEGTVQWIVDQAAAK	3	LDEGTVQWIVDQAAAK3	9113.18	8207.93	6878.11
Q9JLU4	Q9JLU4	SHAN3_RAT	Shank3	SH3 and multiple ankyrin repeat domains protein 3	1	LDEILAVAAEPTLRPDIADADSR	LDEILAVAAEPTLRPDIADADSR	3	LDEILAVAAEPTLRPDIADADSR3	8428.5	4531.28	3937.86
Q6AXX6	Q6AXX6	PXL2A_RAT	Prxl2a	Peroxiredoxin-like 2A	1	LDELGVPLYAVVK	LDELGVPLYAVVK	2	LDELGVPLYAVVK2	97758.3	95724	120970
Q9Z2X3	Q9Z2X3	PSD10_RAT	Psmd10	26S proteasome non-ATPase regulatory subunit 10	1	LDELKESILADK	LDELKESILADK	3	LDELKESILADK3	24235.3	26095.6	21854.2
P50878	P50878	RL4_RAT	Rpl4	Large ribosomal subunit protein uL4	1	LDELYGTWR	LDELYGTWR	2	LDELYGTWR2	32785.2	68156.7	37028.3
Q5PQS4	Q5PQS4	GULP1_RAT	Gulp1	PTB domain-containing engulfment adapter protein 1	1	LDEMQEGFK	LDEMQEGFK	2	LDEMQEGFK2	7785.23	5853.69	7212.9
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	LDENFEPIPQGHVPLHK	LDENFEPIPQGHVPLHK	3	LDENFEPIPQGHVPLHK3	26956.9	21779.8	34172.4
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	LDENFEPIPQGHVPLHK	LDENFEPIPQGHVPLHK	4	LDENFEPIPQGHVPLHK4	125841	95839.5	103606
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LDENSAFLQFNWK	LDENSAFLQFNWK	2	LDENSAFLQFNWK2	122874	146587	128030
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LDENSAFLQFNWK	LDENSAFLQFNWK	3	LDENSAFLQFNWK3	13494.3	7669.72	12737.5
D3ZUB7	D3ZUB7	D3ZUB7_RAT	Anapc4	Anaphase-promoting complex subunit 4	1	LDEQGSIIPTR	LDEQGSIIPTR	2	LDEQGSIIPTR2	15462.9	6659.32	15918.7
P58405	P58405	STRN3_RAT	Strn3	Striatin-3	1	LDESIYDVAFHPSK	LDESIYDVAFHPSK	2	LDESIYDVAFHPSK2	10087.6	9024.73	8531.9
P58405	P58405	STRN3_RAT	Strn3	Striatin-3	1	LDESIYDVAFHPSK	LDESIYDVAFHPSK	3	LDESIYDVAFHPSK3	46681.4	45777.8	49657.6
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LDETGNLMISEGHFASETIR	LDETGNLMISEGHFASETIR	3	LDETGNLMISEGHFASETIR3	274644	290550	288212
Q68HB8	Q68HB8	Q68HB8_RAT	Pcdh7	Protocadherin 7	1	LDETSGWLSVLHR	LDETSGWLSVLHR	3	LDETSGWLSVLHR3	8288.98	8298.77	5209.77
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	LDETVAYEQK	LDETVAYEQK	2	LDETVAYEQK2	10041.6	7662.47	12230.6
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LDEVVCWLTK	LDEVVC(UniMod:4)WLTK	2	LDEVVC(UniMod:4)WLTK2	6482.02	4309.81	2558.93
B0BNF8	B0BNF8	B0BNF8_RAT	Htatip2	HIV-1 Tat interactive protein 2	1	LDEYAPAFQGHDVGFCCLGTTR	LDEYAPAFQGHDVGFC(UniMod:4)C(UniMod:4)LGTTR	3	LDEYAPAFQGHDVGFC(UniMod:4)C(UniMod:4)LGTTR3	26155.4	26960.6	16404.3
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	LDFDGLPSGIGK	LDFDGLPSGIGK	2	LDFDGLPSGIGK2	592179	639116	579646
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	LDFEEFMK	LDFEEFMK	2	LDFEEFMK2	157345	162884	165518
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	LDFETQSLYK	LDFETQSLYK	2	LDFETQSLYK2	8710.54	12972.9	10352.8
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	LDFGETTVLDR	LDFGETTVLDR	2	LDFGETTVLDR2	12922.9	15537.5	11626.8
Q5FVM3	Q5FVM3	RETR1_RAT	Retreg1	Reticulophagy regulator 1	1	LDFGIGEYINQK	LDFGIGEYINQK	2	LDFGIGEYINQK2	15374.9	16818	20815.2
Q9Z244	Q9Z244;Q5FVP6	GMPR1_RAT	Gmpr	GMP reductase 1	0	LDFKDVLLRPK	LDFKDVLLRPK	3	LDFKDVLLRPK3	1262.88	12529.9	
P19468	P19468	GSH1_RAT	Gclc	Glutamate--cysteine ligase catalytic subunit	1	LDFLIPLSK	LDFLIPLSK	2	LDFLIPLSK2	3646.32		1570.03
Q4KLG9	Q4KLG9	ZFN2B_RAT	Zfand2b	AN1-type zinc finger protein 2B	1	LDFLPLK	LDFLPLK	2	LDFLPLK2	12925.3	12982.7	7314.43
Q9JHW0	Q9JHW0	PSB7_RAT	Psmb7	Proteasome subunit beta type-7	1	LDFLRPYSVPNK	LDFLRPYSVPNK	2	LDFLRPYSVPNK2	171729	185322	180581
Q9JHW0	Q9JHW0	PSB7_RAT	Psmb7	Proteasome subunit beta type-7	1	LDFLRPYSVPNK	LDFLRPYSVPNK	3	LDFLRPYSVPNK3	2.29463e+06	2.39095e+06	2.49289e+06
Q9JHW0	Q9JHW0	PSB7_RAT	Psmb7	Proteasome subunit beta type-7	1	LDFLRPYSVPNKK	LDFLRPYSVPNKK	3	LDFLRPYSVPNKK3	459912	444965	483178
Q9JHW0	Q9JHW0	PSB7_RAT	Psmb7	Proteasome subunit beta type-7	1	LDFLRPYSVPNKK	LDFLRPYSVPNKK	4	LDFLRPYSVPNKK4	648073	680817	716807
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	LDFMAWLGAIQK	LDFMAWLGAIQK	2	LDFMAWLGAIQK2	10131.2	9038.6	8626.21
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	LDFNLIR	LDFNLIR	2	LDFNLIR2	64181.9	52497.2	54801.1
A0A8I6ANB2	A0A8I6ANB2	A0A8I6ANB2_RAT	Ppfibp1	PPFIA binding protein 1	1	LDFNWVTR	LDFNWVTR	2	LDFNWVTR2	6580.14	4062.49	5981.91
A0A0G2JZC4	A0A0G2JZC4	A0A0G2JZC4_RAT	Sema6d	Semaphorin 6D	1	LDFQLMLK	LDFQLMLK	2	LDFQLMLK2		4322.26	1991.73
P49651	P49651	P2RY1_RAT	P2ry1	P2Y purinoceptor 1	1	LDFQTPEMCDFNDR	LDFQTPEMC(UniMod:4)DFNDR	2	LDFQTPEMC(UniMod:4)DFNDR2	35450.2	29027	32578.1
P49651	P49651	P2RY1_RAT	P2ry1	P2Y purinoceptor 1	1	LDFQTPEMCDFNDR	LDFQTPEMC(UniMod:4)DFNDR	3	LDFQTPEMC(UniMod:4)DFNDR3	8093.65	3788.5	7113.75
M0R9W9	M0R9W9;D4A456	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	0	LDFSCNK	LDFSC(UniMod:4)NK	2	LDFSC(UniMod:4)NK2	27914	35727.9	31161.1
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	LDFSCNR	LDFSC(UniMod:4)NR	2	LDFSC(UniMod:4)NR2	68257.7	61213.3	75289.1
O08874	O08874	PKN2_RAT	Pkn2	Serine/threonine-protein kinase N2	1	LDFSDTIVQQK	LDFSDTIVQQK	2	LDFSDTIVQQK2	3166.92	2775.72	4161.12
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	LDFSGIEPDVKPFEEK	LDFSGIEPDVKPFEEK	2	LDFSGIEPDVKPFEEK2		1989.75	
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	LDFSGIEPDVKPFEEK	LDFSGIEPDVKPFEEK	3	LDFSGIEPDVKPFEEK3	50860.6	74598.9	67718.6
Q5XI41	Q5XI41	TRAM1_RAT	Tram1	Translocating chain-associated membrane protein 1	1	LDFSTGNFNVLAVR	LDFSTGNFNVLAVR	2	LDFSTGNFNVLAVR2	18440.7	14392.3	13412.4
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	LDFTVEHDSLR	LDFTVEHDSLR	3	LDFTVEHDSLR3	38418.3	40537.2	49736.9
Q9JLZ1	Q9JLZ1	GLRX3_RAT	Glrx3	Glutaredoxin-3	1	LDGAHAPELTK	LDGAHAPELTK	3	LDGAHAPELTK3	38631.9	27280.7	37884.6
E9PSX8	E9PSX8	E9PSX8_RAT	Sipa1	Signal-induced proliferation-associated 1	1	LDGAPGQAVGEVVAR	LDGAPGQAVGEVVAR	2	LDGAPGQAVGEVVAR2	8589.66	5084.02	9400.97
Q9EQT5	Q9EQT5	TINAL_RAT	Tinagl1	Tubulointerstitial nephritis antigen-like	1	LDGAWWFLR	LDGAWWFLR	2	LDGAWWFLR2		8544.34	10988.6
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	LDGCIRGWNLMK	LDGC(UniMod:4)IRGWNLMK	3	LDGC(UniMod:4)IRGWNLMK3	16031	7979.32	21617.5
Q66H12	Q66H12	NAGAB_RAT	Naga	Alpha-N-acetylgalactosaminidase	1	LDGCYSTPK	LDGC(UniMod:4)YSTPK	2	LDGC(UniMod:4)YSTPK2	30396.3	29171.1	27732.5
B0BN63	B0BN63	B0BN63_RAT	Ahsa1	Activator of Hsp90 ATPase activity 1	1	LDGEASINNR	LDGEASINNR	2	LDGEASINNR2	11620.3	7916.99	10155.1
F7FHP0	F7FHP0	F7FHP0_RAT	Angptl3	Angiopoietin-like 3	1	LDGEFWLGLEK	LDGEFWLGLEK	2	LDGEFWLGLEK2	8594.47	9201.09	
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	LDGENIYIR	LDGENIYIR	2	LDGENIYIR2	77116.2	60374	69793.7
Q91XU8	Q91XU8	CDS2_RAT	Cds2	Phosphatidate cytidylyltransferase 2	1	LDGETASDSESR	LDGETASDSESR	2	LDGETASDSESR2	118234	109887	113971
D4AEP0	D4AEP0	D4AEP0_RAT	Adss	Adenylosuccinate synthetase isozyme 2	1	LDGETIPHFPANQEVLNK	LDGETIPHFPANQEVLNK	3	LDGETIPHFPANQEVLNK3	14962.3	16326.1	7188.54
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	LDGFPPGRPSPDNLK	LDGFPPGRPSPDNLK	3	LDGFPPGRPSPDNLK3	542587	383111	383366
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	LDGHGTVPLGADQILLR	LDGHGTVPLGADQILLR	2	LDGHGTVPLGADQILLR2	14761.4	13925	9849.74
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	LDGHGTVPLGADQILLR	LDGHGTVPLGADQILLR	3	LDGHGTVPLGADQILLR3	92547.8	77108.7	74105.4
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	LDGHTGCTLWTPFNK	LDGHTGC(UniMod:4)TLWTPFNK	2	LDGHTGC(UniMod:4)TLWTPFNK2	1858.37		3813.24
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	LDGHTGCTLWTPFNK	LDGHTGC(UniMod:4)TLWTPFNK	3	LDGHTGC(UniMod:4)TLWTPFNK3	70560.4	80761.8	48578.8
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	LDGLCIPLR	LDGLC(UniMod:4)IPLR	2	LDGLC(UniMod:4)IPLR2	382229	443051	410040
Q9Z2G8	Q9Z2G8	NP1L1_RAT	Nap1l1	Nucleosome assembly protein 1-like 1	1	LDGLVDTPTGYIESLPK	LDGLVDTPTGYIESLPK	2	LDGLVDTPTGYIESLPK2	71290.8	56358.6	71282.7
Q9Z2G8	Q9Z2G8	NP1L1_RAT	Nap1l1	Nucleosome assembly protein 1-like 1	1	LDGLVDTPTGYIESLPK	LDGLVDTPTGYIESLPK	3	LDGLVDTPTGYIESLPK3	20807.1	23276.3	21482.4
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	LDGLVEFGVR	LDGLVEFGVR	2	LDGLVEFGVR2	439262	383797	394251
A0A8I6A282	A0A8I6A282	A0A8I6A282_RAT	Antxr2	Anthrax toxin receptor	1	LDGLVPSYAEK	LDGLVPSYAEK	2	LDGLVPSYAEK2	137157	152540	149769
Q7TSU1	D4A631;Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	0	LDGNAIVDFVR	LDGNAIVDFVR	2	LDGNAIVDFVR2	12371.4	13544.2	21379.9
Q5RJR8	Q5RJR8	LRC59_RAT	Lrrc59	Leucine-rich repeat-containing protein 59	1	LDGNELDLSLSDLNEVPVK	LDGNELDLSLSDLNEVPVK	3	LDGNELDLSLSDLNEVPVK3	13648.3	7463.99	13295.3
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	LDGNLPTQSGETR	LDGNLPTQSGETR	2	LDGNLPTQSGETR2	43338.8	51256.1	51182.5
P51886	P51886	LUM_RAT	Lum	Lumican	1	LDGNPLTQSSLPPDMYECLR	LDGNPLTQSSLPPDMYEC(UniMod:4)LR	3	LDGNPLTQSSLPPDMYEC(UniMod:4)LR3	9.12352e+06	9.64768e+06	1.05763e+07
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	LDGNQDLIR	LDGNQDLIR	2	LDGNQDLIR2	111773	108523	99529.6
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	LDGPEEVECTK	LDGPEEVEC(UniMod:4)TK	2	LDGPEEVEC(UniMod:4)TK2	3.71847e+06	3.29498e+06	3.50211e+06
A0A8I6A6I4	A0A8I6A6I4	A0A8I6A6I4_RAT	Atp11b	Phospholipid-transporting ATPase	1	LDGSCHVTTASLDGETNLK	LDGSC(UniMod:4)HVTTASLDGETNLK	3	LDGSC(UniMod:4)HVTTASLDGETNLK3	11438.7		11341
Q8VIL3	Q8VIL3	ZWINT_RAT	Zwint	ZW10 interactor	1	LDGSHQELETLK	LDGSHQELETLK	2	LDGSHQELETLK2	7712.66	2937.11	7375.06
Q8VIL3	Q8VIL3	ZWINT_RAT	Zwint	ZW10 interactor	1	LDGSHQELETLK	LDGSHQELETLK	3	LDGSHQELETLK3	167462	182867	195962
D3ZVS2	D3ZVS2	D3ZVS2_RAT	L2hgdh	L-2-hydroxyglutarate dehydrogenase	1	LDGSIWLGPNAVLAFK	LDGSIWLGPNAVLAFK	2	LDGSIWLGPNAVLAFK2	1459.32		1217.66
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	LDGSVDFK	LDGSVDFK	1	LDGSVDFK1	191673	133521	103721
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	LDGSVDFK	LDGSVDFK	2	LDGSVDFK2	659038	517173	526994
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	LDGSVDFKK	LDGSVDFKK	2	LDGSVDFKK2	3.12072e+06	2.60066e+06	2.62101e+06
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	LDGTLEGCAAETPGDSAGDMR	LDGTLEGC(UniMod:4)AAETPGDSAGDMR	3	LDGTLEGC(UniMod:4)AAETPGDSAGDMR3	1831.71	11657.5	2784.26
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	LDGTQDMLSVLPGEFPNLHHMEK	LDGTQDMLSVLPGEFPNLHHMEK	4	LDGTQDMLSVLPGEFPNLHHMEK4	29379.5	39059.6	29417.9
Q8R3Z7	Q8R3Z7	Q8R3Z7_RAT	Ehd4	EH-domain containing 4	1	LDGYELPNSLPPHLVPPSHR	LDGYELPNSLPPHLVPPSHR	3	LDGYELPNSLPPHLVPPSHR3	6309.97		11038
D3ZX06	D3ZX06	D3ZX06_RAT	Ghdc	GH3 domain containing	1	LDHCLQEASPR	LDHC(UniMod:4)LQEASPR	3	LDHC(UniMod:4)LQEASPR3	9798.75	16106.1	15085.2
P18266	P18266;P18265	GSK3B_RAT	Gsk3b	Glycogen synthase kinase-3 beta	0	LDHCNIVR	LDHC(UniMod:4)NIVR	2	LDHC(UniMod:4)NIVR2	5318.14	6253.45	11751.3
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	LDHDGAILDVDEDDVEK	LDHDGAILDVDEDDVEK	3	LDHDGAILDVDEDDVEK3	5426.28	4539.47	
D4A3V6	D4A3V6	D4A3V6_RAT	Bloc1s3	Biogenesis of lysosome-related organelles complex 1 subunit 3	1	LDHDVAAAVSGVYR	LDHDVAAAVSGVYR	3	LDHDVAAAVSGVYR3	18503.7	24410.8	24510.7
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	LDHEAIHQHVLTVMVR	LDHEAIHQHVLTVMVR	3	LDHEAIHQHVLTVMVR3	2851.64	2347.14	
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	LDHEAIHQHVLTVMVR	LDHEAIHQHVLTVMVR	4	LDHEAIHQHVLTVMVR4	90877.3	76827.4	70712
O70367	O70367	CNMD_RAT	Cnmd	Leukocyte cell-derived chemotaxin 1	1	LDHEGICCIECR	LDHEGIC(UniMod:4)C(UniMod:4)IEC(UniMod:4)R	2	LDHEGIC(UniMod:4)C(UniMod:4)IEC(UniMod:4)R2	2883.25	2702.31	
O70367	O70367	CNMD_RAT	Cnmd	Leukocyte cell-derived chemotaxin 1	1	LDHEGICCIECR	LDHEGIC(UniMod:4)C(UniMod:4)IEC(UniMod:4)R	3	LDHEGIC(UniMod:4)C(UniMod:4)IEC(UniMod:4)R3	16149.2	27399.4	12303
D3ZDW3	D3ZDW3	D3ZDW3_RAT	Tsc22d2	TSC22 domain family, member 2	1	LDHGSGEPYR	LDHGSGEPYR	2	LDHGSGEPYR2	1827.39		2866.34
D3ZQ80	D3ZQ80	D3ZQ80_RAT	Smg8	Nonsense-mediated mRNA decay factor SMG8	1	LDHINFPVFEPSTPDPAPAK	LDHINFPVFEPSTPDPAPAK	3	LDHINFPVFEPSTPDPAPAK3	9664.25	8457.52	7396.43
Q5XIF6	P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9;Q6AY56;F1LUM5	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	LDHKFDLMYAK	LDHKFDLMYAK	3	LDHKFDLMYAK3	4572.01	17133.5	8895.06
Q5XIF6	P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9;Q6AY56	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	LDHKFDLMYAKR	LDHKFDLMYAKR	4	LDHKFDLMYAKR4	2872.22	5826.71	5955.32
Q9Z1P2	Q9QXQ0;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	LDHLAEK	LDHLAEK	1	LDHLAEK1	135806	120556	91691.2
Q9Z1P2	Q9QXQ0;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	LDHLAEK	LDHLAEK	2	LDHLAEK2	1.8235e+06	2.12967e+06	2.05275e+06
A0A8I6A538	A0A8I6A538	A0A8I6A538_RAT	Nin	Ninein	1	LDHLMSEEPELLCQESK	LDHLMSEEPELLC(UniMod:4)QESK	3	LDHLMSEEPELLC(UniMod:4)QESK3	4973.68	5884.14	2321.45
Q99P99	Q99P99	HDAC4_RAT	Hdac4	Histone deacetylase 4	1	LDHQFSLPLEPALR	LDHQFSLPLEPALR	3	LDHQFSLPLEPALR3	11189.1	11122.4	9031.97
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LDHTHSLR	LDHTHSLR	2	LDHTHSLR2			319260
D3ZUZ4	D3ZUZ4	D3ZUZ4_RAT	Fam20b	FAM20B, glycosaminoglycan xylosylkinase	1	LDHTLQSPWEIAAQWVVPR	LDHTLQSPWEIAAQWVVPR	3	LDHTLQSPWEIAAQWVVPR3	6191.56	7343.53	11846.9
Q63009	Q63009	ANM1_RAT	Prmt1	Protein arginine N-methyltransferase 1	1	LDHVVTIIK	LDHVVTIIK	2	LDHVVTIIK2	12339.8	12586.8	21003.7
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	LDHYQYLALLR	LDHYQYLALLR	3	LDHYQYLALLR3	9249.37	8967.38	14281.9
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	LDIDPETITWQR	LDIDPETITWQR	2	LDIDPETITWQR2	58732.9	55906	62406.4
P11980	A0A8I6G3S8;M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	LDIDSAPITAR	LDIDSAPITAR	2	LDIDSAPITAR2	535580	430555	505286
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LDIEDSEAECR	LDIEDSEAEC(UniMod:4)R	2	LDIEDSEAEC(UniMod:4)R2	85228.6	95698.6	74253.9
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LDIEDSEAECRK	LDIEDSEAEC(UniMod:4)RK	2	LDIEDSEAEC(UniMod:4)RK2	1908.31	1970.6	3065.13
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LDIEDSEAECRK	LDIEDSEAEC(UniMod:4)RK	3	LDIEDSEAEC(UniMod:4)RK3	76551.5	80731.4	81817.1
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	LDIHTLAHHLK	LDIHTLAHHLK	2	LDIHTLAHHLK2	926.851	2636.97	
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	LDIHTLAHHLK	LDIHTLAHHLK	3	LDIHTLAHHLK3	31341.6	28931.3	21286.2
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	LDIIQPLPETCEEISSDALTVR	LDIIQPLPETC(UniMod:4)EEISSDALTVR	3	LDIIQPLPETC(UniMod:4)EEISSDALTVR3	5861.15	10554.1	11236
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LDILDQER	LDILDQER	2	LDILDQER2	581016	591651	548804
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LDILDQERTDLEK	LDILDQERTDLEK	2	LDILDQERTDLEK2	8137.47	5585.54	
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LDILDQERTDLEK	LDILDQERTDLEK	3	LDILDQERTDLEK3	317328	320884	393754
D3Z8L7	Q5BJU0;D3Z8L7	RRAS_RAT	Rras	Ras-related protein R-Ras	0	LDILDTAGQEEFGAMR	LDILDTAGQEEFGAMR	2	LDILDTAGQEEFGAMR2	184188	187368	197646
D3Z8L7	Q5BJU0;D3Z8L7	RRAS_RAT	Rras	Ras-related protein R-Ras	0	LDILDTAGQEEFGAMR	LDILDTAGQEEFGAMR	3	LDILDTAGQEEFGAMR3	12454.9	15015.1	17325.7
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	LDILEWMCIR	LDILEWMC(UniMod:4)IR	2	LDILEWMC(UniMod:4)IR2	8142.95	4346.59	2173.79
Q4V897	Q4V897	CC90B_RAT	Ccdc90b	Coiled-coil domain-containing protein 90B, mitochondrial	1	LDINLER	LDINLER	2	LDINLER2	31105	25381.9	33446.5
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	LDINTNTYTSQDLK	LDINTNTYTSQDLK	2	LDINTNTYTSQDLK2	6996.78	7560.49	6522.64
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	LDISCPPR	LDISC(UniMod:4)PPR	2	LDISC(UniMod:4)PPR2	35159.9	25142.4	30677.2
Q8R3Z7	Q8R3Z7	Q8R3Z7_RAT	Ehd4	EH-domain containing 4	1	LDISDEFSEAIK	LDISDEFSEAIK	2	LDISDEFSEAIK2	28606.4	29033.2	27813.3
Q8R491	Q8R491;Q641Z6	EHD3_RAT	Ehd3	EH domain-containing protein 3	0	LDISDEFSEVIK	LDISDEFSEVIK	2	LDISDEFSEVIK2	128923	113748	133261
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	LDISSLNRPPSVTEAPPWR	LDISSLNRPPSVTEAPPWR	3	LDISSLNRPPSVTEAPPWR3	40450.8	50161.9	51644.5
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	LDIVFYLLR	LDIVFYLLR	2	LDIVFYLLR2	3115.01	6515.66	5682.36
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	LDKDEIIK	LDKDEIIK	2	LDKDEIIK2	3146.19	2069.19	3590.4
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	LDKDLETQR	LDKDLETQR	2	LDKDLETQR2	5878.42	4827.2	1685.16
Q4FZT2	Q4FZT2	PPME1_RAT	Ppme1	Protein phosphatase methylesterase 1	1	LDKDLTIGQMQGK	LDKDLTIGQMQGK	3	LDKDLTIGQMQGK3	16408.5	12086.7	17215.5
M0RC73	M0RC73	M0RC73_RAT	Naa16	N(alpha)-acetyltransferase 16, NatA auxiliary subunit	1	LDKDNLQILR	LDKDNLQILR	3	LDKDNLQILR3	6332.19	6253.61	
Q5U318	Q5U318	PEA15_RAT	Pea15	Astrocytic phosphoprotein PEA-15	1	LDKDNLSYIEHIFEISR	LDKDNLSYIEHIFEISR	3	LDKDNLSYIEHIFEISR3	7316.63	4889.63	5433.07
Q5U318	Q5U318	PEA15_RAT	Pea15	Astrocytic phosphoprotein PEA-15	1	LDKDNLSYIEHIFEISR	LDKDNLSYIEHIFEISR	4	LDKDNLSYIEHIFEISR4	3453.01	7201.24	3082.61
P58775	P58775	TPM2_RAT	Tpm2	Tropomyosin beta chain	1	LDKENAIDR	LDKENAIDR	2	LDKENAIDR2	236974	254920	
P04692	P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	1	LDKENALDR	LDKENALDR	2	LDKENALDR2	737710	643020	588741
P52555	P52555	ERP29_RAT	Erp29	Endoplasmic reticulum resident protein 29	1	LDKESYPVFYLFR	LDKESYPVFYLFR	3	LDKESYPVFYLFR3	54865.9	51135.6	45983.2
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	LDKGQIQEIVLVGGSTR	LDKGQIQEIVLVGGSTR	3	LDKGQIQEIVLVGGSTR3	11240.3	9571.14	11549.8
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	LDKPNVVNWLCYR	LDKPNVVNWLC(UniMod:4)YR	2	LDKPNVVNWLC(UniMod:4)YR2	161204	163152	110034
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	LDKPNVVNWLCYR	LDKPNVVNWLC(UniMod:4)YR	3	LDKPNVVNWLC(UniMod:4)YR3	91128.8	102990	89865.5
Q6TUD3	Q6TUD3	Q6TUD3_RAT	Rdh11	LRRGT00111	1	LDLADTK	LDLADTK	2	LDLADTK2	75914.8	95442.8	59704.4
P68136	P60711;P63259;D3ZRN3;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	LDLAGRDLTDYLMK	LDLAGRDLTDYLMK	2	LDLAGRDLTDYLMK2	18186.5	10050.7	16034.8
P68136	P60711;P63259;D3ZRN3;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	LDLAGRDLTDYLMK	LDLAGRDLTDYLMK	3	LDLAGRDLTDYLMK3	295493	347656	309401
Q5PPJ9	Q5PPJ9	SHLB2_RAT	Sh3glb2	Endophilin-B2	1	LDLDACK	LDLDAC(UniMod:4)K	2	LDLDAC(UniMod:4)K2	7697.19	25403	
D3ZFJ6	D3ZFJ6	D3ZFJ6_RAT	Lactb	Lactamase, beta	1	LDLDLPVQHYVPEFPEK	LDLDLPVQHYVPEFPEK	3	LDLDLPVQHYVPEFPEK3		6279.31	6042.81
Q6MG51	Q6MG51	CF047_RAT	G4	Uncharacterized protein C6orf47 homolog	1	LDLDPVDSGGMK	LDLDPVDSGGMK	2	LDLDPVDSGGMK2	25425	20755.2	22176
Q6P799	Q6P799	SYSC_RAT	Sars1	Serine--tRNA ligase, cytoplasmic	1	LDLEAWFPGSGAFR	LDLEAWFPGSGAFR	2	LDLEAWFPGSGAFR2	22031.6	23292	27461.1
B0BMY7	B0BMY7	B0BMY7_RAT	Twf2	Twinfilin actin-binding protein 2	1	LDLERETIELVHTEPTNVAQLPSR	LDLERETIELVHTEPTNVAQLPSR	4	LDLERETIELVHTEPTNVAQLPSR4		6719.38	
Q68FX0	Q68FX0	IDH3B_RAT	Idh3B	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	LDLFANVVHVK	LDLFANVVHVK	2	LDLFANVVHVK2	19939.9	16216.3	11929.8
Q68FX0	Q68FX0	IDH3B_RAT	Idh3B	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	LDLFANVVHVK	LDLFANVVHVK	3	LDLFANVVHVK3	32826	36755.1	37459.5
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	LDLGFVYALADLVPK	LDLGFVYALADLVPK	2	LDLGFVYALADLVPK2		2085.79	5907.63
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	LDLGFVYALADLVPK	LDLGFVYALADLVPK	3	LDLGFVYALADLVPK3		1826.89	
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	LDLGSNEFTEVPEVLEQLSGLR	LDLGSNEFTEVPEVLEQLSGLR	3	LDLGSNEFTEVPEVLEQLSGLR3		11172.8	13085.6
A0A8I5ZKD4	A0A8I5ZKD4	A0A8I5ZKD4_RAT	Nhlrc3	NHL repeat containing 3	1	LDLGWPK	LDLGWPK	2	LDLGWPK2	61206.3	55247.9	55657.6
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	LDLHICDDSQSR	LDLHIC(UniMod:4)DDSQSR	3	LDLHIC(UniMod:4)DDSQSR3	3755.78		2812.11
P28840	P28840	NEC1_RAT	Pcsk1	Neuroendocrine convertase 1	1	LDLHVIPVWQK	LDLHVIPVWQK	3	LDLHVIPVWQK3	19583.8	16732.6	9595.56
Q6PCU2	Q6PCU2	VATE1_RAT	Atp6v1e1	V-type proton ATPase subunit E 1	1	LDLIAQQMMPEVR	LDLIAQQMMPEVR	2	LDLIAQQMMPEVR2	34065.6	26293.3	25487.8
Q6PCU2	Q6PCU2	VATE1_RAT	Atp6v1e1	V-type proton ATPase subunit E 1	1	LDLIAQQMMPEVR	LDLIAQQMMPEVR	3	LDLIAQQMMPEVR3	1291	1995.6	3617.76
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	LDLIHESILHK	LDLIHESILHK	3	LDLIHESILHK3	76502.8	75164.8	71072.9
E9PU03	E9PU03	E9PU03_RAT	Smg5	Nonsense-mediated mRNA decay factor	1	LDLILCNK	LDLILC(UniMod:4)NK	2	LDLILC(UniMod:4)NK2	11466.9	12415.8	7379.72
P0CC10	P0CC10	LRC4B_RAT	Lrrc4b	Leucine-rich repeat-containing protein 4B	1	LDLIRPGSFQGLTSLR	LDLIRPGSFQGLTSLR	3	LDLIRPGSFQGLTSLR3	3040.72	4610.66	6058.7
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	LDLISELR	LDLISELR	2	LDLISELR2	57057.3	60799.3	56704.6
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	LDLLEEQVAGAVR	LDLLEEQVAGAVR	2	LDLLEEQVAGAVR2	266663	280056	293820
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	LDLLEEQVAGAVR	LDLLEEQVAGAVR	3	LDLLEEQVAGAVR3	67892.8	75460.8	81146.3
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	LDLLLDDPIHSPTVPR	LDLLLDDPIHSPTVPR	2	LDLLLDDPIHSPTVPR2	6483.19	4949.63	2724.84
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	LDLLLDDPIHSPTVPR	LDLLLDDPIHSPTVPR	3	LDLLLDDPIHSPTVPR3	198961	234909	240618
Q9JLH7	Q9JLH7;D4A1S2	CK5P3_RAT	Cdk5rap3	CDK5 regulatory subunit-associated protein 3	0	LDLLLEK	LDLLLEK	2	LDLLLEK2	84195.6	68462.7	75658.8
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	LDLLPFYAR	LDLLPFYAR	2	LDLLPFYAR2	14494.7	15278.1	11921.1
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	LDLLQQR	LDLLQQR	2	LDLLQQR2	86062.1	77740.7	69618.7
Q641X8	Q641X8;A0A0G2K273	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	0	LDLLSDTNMVDFAMDVYK	LDLLSDTNMVDFAMDVYK	3	LDLLSDTNMVDFAMDVYK3	5453.22	8547.42	5017.24
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	LDLMDAGTDAMDVLMGR	LDLMDAGTDAMDVLMGR	2	LDLMDAGTDAMDVLMGR2	3427.86		2104.59
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	LDLMDAGTDAMDVLMGR	LDLMDAGTDAMDVLMGR	3	LDLMDAGTDAMDVLMGR3	2697.67		5997.6
P39052	P39052;P21575;Q08877	DYN2_RAT	Dnm2	Dynamin-2	0	LDLMDEGTDAR	LDLMDEGTDAR	2	LDLMDEGTDAR2	72386.1	62755.6	72264.7
P39052	P39052;P21575;Q08877	DYN2_RAT	Dnm2	Dynamin-2	0	LDLMDEGTDARDVLENK	LDLMDEGTDARDVLENK	3	LDLMDEGTDARDVLENK3	63582	49381.1	59446.9
A0A8I5ZVX1	A0A8I5ZVX1	A0A8I5ZVX1_RAT	Ppfibp2	PPFIA binding protein 2	1	LDLMTEVSELK	LDLMTEVSELK	2	LDLMTEVSELK2	17586.6	19522	17070.3
Q62867	Q62867	GGH_RAT	Ggh	Gamma-glutamyl hydrolase	1	LDLNDAQYETLFR	LDLNDAQYETLFR	2	LDLNDAQYETLFR2	7226.3	10127.1	17255.1
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	LDLPDLPLSDLLK	LDLPDLPLSDLLK	2	LDLPDLPLSDLLK2	13467.5	11211.3	9241.64
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	LDLPPYESFDELWDK	LDLPPYESFDELWDK	2	LDLPPYESFDELWDK2	432316	427242	397989
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	LDLPPYESFDELWDK	LDLPPYESFDELWDK	3	LDLPPYESFDELWDK3	2750.8		4489.54
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	LDLPSNLPGLILSSEHCNK	LDLPSNLPGLILSSEHC(UniMod:4)NK	3	LDLPSNLPGLILSSEHC(UniMod:4)NK3	11599.7	4759.59	4761.91
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	LDLPVER	LDLPVER	2	LDLPVER2	130120	118630	153165
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	LDLPVTVR	LDLPVTVR	2	LDLPVTVR2	222890	230385	200326
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	LDLQPILAEALPILASFLR	LDLQPILAEALPILASFLR	3	LDLQPILAEALPILASFLR3	5519.16		
Q6RUV5	A0A8I6A1P8;M0R5T4;Q6RUV5	RAC1_RAT	Rac1	Ras-related C3 botulinum toxin substrate 1	0	LDLRDDK	LDLRDDK	2	LDLRDDK2	14937.1	15475.1	21060.9
Q6RUV5	A0A8I6A1P8;Q6RUV5	RAC1_RAT	Rac1	Ras-related C3 botulinum toxin substrate 1	0	LDLRDDKDTIEK	LDLRDDKDTIEK	2	LDLRDDKDTIEK2	16539.7	15671.4	14980.9
Q6RUV5	A0A8I6A1P8;Q6RUV5	RAC1_RAT	Rac1	Ras-related C3 botulinum toxin substrate 1	0	LDLRDDKDTIEK	LDLRDDKDTIEK	3	LDLRDDKDTIEK3	583738	581277	615323
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	LDLRDPNALFETHGAEEIR	LDLRDPNALFETHGAEEIR	4	LDLRDPNALFETHGAEEIR4		11239	4520.26
D4A929	D4A929	WDR81_RAT	Wdr81	WD repeat-containing protein 81	1	LDLSAYEMPSEDENQEVSEEKDR	LDLSAYEMPSEDENQEVSEEKDR	3	LDLSAYEMPSEDENQEVSEEKDR3	5183.31	18400	4587.83
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	LDLSENSLQAVPR	LDLSENSLQAVPR	2	LDLSENSLQAVPR2	4517.81	8153.78	9114.98
F1LYX9	F1LYX9	F1LYX9_RAT	Dsg2	Desmoglein 2	1	LDLSILVTNK	LDLSILVTNK	2	LDLSILVTNK2	23253.8	19266.6	16060.4
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	LDLSPSVSVATSTEQQEDAAR	LDLSPSVSVATSTEQQEDAAR	3	LDLSPSVSVATSTEQQEDAAR3	6918.92	5137.52	4868.87
D4A6U4	D4A6U4	D4A6U4_RAT	Tecpr2	Tectonin beta-propeller repeat containing 2	1	LDLSQLGAVR	LDLSQLGAVR	2	LDLSQLGAVR2	8835.8	9509.76	9075.43
D3ZYW7	D3ZYW7	FRDA_RAT	Fxn	Frataxin, mitochondrial	1	LDLSSLAYSGK	LDLSSLAYSGK	2	LDLSSLAYSGK2	18978.1	21006.1	19197.7
Q6AYD0	Q6AYD0	Q6AYD0_RAT	Lrrc17	Leucine rich repeat containing 17	1	LDLSYNK	LDLSYNK	2	LDLSYNK2	22673.1	19212.6	21325.7
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	LDLVGSSQPIK	LDLVGSSQPIK	2	LDLVGSSQPIK2	58558.4	86968.9	56299.9
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	LDLVGSSQPIKESNSLFPAGIR	LDLVGSSQPIKESNSLFPAGIR	3	LDLVGSSQPIKESNSLFPAGIR3	10851.1	9033.4	13170
O08774	O08774	RGS12_RAT	Rgs12	Regulator of G-protein signaling 12	1	LDLVPINR	LDLVPINR	2	LDLVPINR2	22171.4	13309	17145.2
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	LDLVSYFGK	LDLVSYFGK	2	LDLVSYFGK2	153668	169626	171396
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	LDLWSLPPVLVVHLK	LDLWSLPPVLVVHLK	2	LDLWSLPPVLVVHLK2	8667.57	6675.97	6376.11
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	LDLWSLPPVLVVHLK	LDLWSLPPVLVVHLK	3	LDLWSLPPVLVVHLK3	62218.7	86126.7	60734
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	LDMEEEER	LDMEEEER	2	LDMEEEER2	24799.7	17452.3	27670.3
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LDMEIER	LDMEIER	2	LDMEIER2	156193	192199	166640
Q6P6U0	Q6P6U0	FGR_RAT	Fgr	Tyrosine-protein kinase Fgr	1	LDMGGYYITTR	LDMGGYYITTR	2	LDMGGYYITTR2	5377.31		
A0A8I6A6H8	A0A8I6A6H8	A0A8I6A6H8_RAT	Serpinb6a	Serpin family B member 6A	1	LDMLDEEEVEVFLPR	LDMLDEEEVEVFLPR	2	LDMLDEEEVEVFLPR2	95776.4	88614.9	102432
A0A8I6A6H8	A0A8I6A6H8	A0A8I6A6H8_RAT	Serpinb6a	Serpin family B member 6A	1	LDMLDEEEVEVFLPR	LDMLDEEEVEVFLPR	3	LDMLDEEEVEVFLPR3	25318.4	21063.1	26704.6
Q8R431	Q8R431	MGLL_RAT	Mgll	Monoglyceride lipase	1	LDMLVFAHDHVGHGQSEGER	LDMLVFAHDHVGHGQSEGER	4	LDMLVFAHDHVGHGQSEGER4		3068.35	3772.81
Q9WTT2	Q9WTT2	CLPB_RAT	Clpb	Mitochondrial disaggregase	1	LDMSEFQER	LDMSEFQER	2	LDMSEFQER2	4054.89	7163.76	3867
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LDMTFSK	LDMTFSK	1	LDMTFSK1	64953.1	76852.4	63502.6
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LDMTFSK	LDMTFSK	2	LDMTFSK2	4.38607e+06	4.74102e+06	4.71745e+06
P53676	P53678;P53676	AP3M1_RAT	Ap3m1	AP-3 complex subunit mu-1	0	LDMYGEK	LDMYGEK	2	LDMYGEK2	31443.6	44050.2	48044.2
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	LDMYVLNPVK	LDMYVLNPVK	2	LDMYVLNPVK2	5565.55	1525.95	2286.39
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	LDNCHSTPLHVAEYMLDAAR	LDNC(UniMod:4)HSTPLHVAEYMLDAAR	4	LDNC(UniMod:4)HSTPLHVAEYMLDAAR4	14166.4	18806.3	17270.8
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	LDNCTMFR	LDNC(UniMod:4)TMFR	2	LDNC(UniMod:4)TMFR2	4404.14		
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	LDNDTNATK	LDNDTNATK	2	LDNDTNATK2			16190.2
Q62844	Q62844;F1LM93	FYN_RAT	Fyn	Tyrosine-protein kinase Fyn	0	LDNGGYYITTR	LDNGGYYITTR	2	LDNGGYYITTR2	16039.9	16933.3	19815.4
D3ZMV1	D3ZMV1	D3ZMV1_RAT	Sla2	Src-like-adaptor 2	1	LDNGWLYISPR	LDNGWLYISPR	2	LDNGWLYISPR2	23212.6	22738.1	23166.6
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	LDNILLDR	LDNILLDR	2	LDNILLDR2	93245.5	89633	102416
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	LDNILLDRDGHIK	LDNILLDRDGHIK	4	LDNILLDRDGHIK4	14339.1	22650	32835.3
A0A0G2K089	A0A0G2K089	A0A0G2K089_RAT	Dennd4c	DENN domain containing 4C	1	LDNILSGPK	LDNILSGPK	2	LDNILSGPK2	9080.56	11568.8	7682.95
A0A8I6AVP7	A0A8I6AVP7	A0A8I6AVP7_RAT	Odr4	Protein odr-4 homolog	1	LDNLDEEWATEHANQVSR	LDNLDEEWATEHANQVSR	3	LDNLDEEWATEHANQVSR3	13684.8	15269.2	16438
A0A8I6A8L3	A0A8I6A8L3	A0A8I6A8L3_RAT	Dnpep	Aspartyl aminopeptidase	1	LDNLHSCFCALQALIDSCASPASLAR	LDNLHSC(UniMod:4)FC(UniMod:4)ALQALIDSC(UniMod:4)ASPASLAR	3	LDNLHSC(UniMod:4)FC(UniMod:4)ALQALIDSC(UniMod:4)ASPASLAR3			5316.84
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LDNLLGEVR	LDNLLGEVR	2	LDNLLGEVR2	110065	121580	132873
Q63433	Q63433	PKN1_RAT	Pkn1	Serine/threonine-protein kinase N1	1	LDNLLLDTEGYVK	LDNLLLDTEGYVK	2	LDNLLLDTEGYVK2	6754.81	6734.61	10697.1
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	LDNLVAIFDINR	LDNLVAIFDINR	2	LDNLVAIFDINR2	31454.5	31314.4	30351.5
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	LDNMNVSR	LDNMNVSR	2	LDNMNVSR2	58054.4	65746.5	65406.3
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	LDNNGCSTQEVNITEFQLK	LDNNGC(UniMod:4)STQEVNITEFQLK	3	LDNNGC(UniMod:4)STQEVNITEFQLK3	307010	233797	240072
F1LTR1	F1LTR1	WDR26_RAT	Wdr26	WD repeat-containing protein 26	1	LDNNLDSVSLLIDHVCSR	LDNNLDSVSLLIDHVC(UniMod:4)SR	3	LDNNLDSVSLLIDHVC(UniMod:4)SR3	15180.4	15036.7	15192.8
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	LDNTTAAVQELGR	LDNTTAAVQELGR	2	LDNTTAAVQELGR2	25469.1	15139.3	16797.7
O08874	O08874	PKN2_RAT	Pkn2	Serine/threonine-protein kinase N2	1	LDNTVVGQTIWKPISNQSWDQK	LDNTVVGQTIWKPISNQSWDQK	3	LDNTVVGQTIWKPISNQSWDQK3	1046.47	4859.16	5116.25
F1M7Y5	F1M7Y5	KPCI_RAT	Prkci	Protein kinase C iota type	1	LDNVLLDSEGHIK	LDNVLLDSEGHIK	3	LDNVLLDSEGHIK3	5960.96	7496.42	10698.7
P09215	P09215	KPCD_RAT	Prkcd	Protein kinase C delta type	1	LDNVMLDKDGHIK	LDNVMLDKDGHIK	3	LDNVMLDKDGHIK3	9463.9	7148.56	17536.1
P05696	P68403;P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	0	LDNVMLDSEGHIK	LDNVMLDSEGHIK	2	LDNVMLDSEGHIK2	61419.2	59261.3	60720
P05696	P68403;P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	0	LDNVMLDSEGHIK	LDNVMLDSEGHIK	3	LDNVMLDSEGHIK3	389513	354904	427223
Q5U2Z3	Q5U2Z3	NP1L4_RAT	Nap1l4	Nucleosome assembly protein 1-like 4	1	LDNVSHTPSSYIETLPK	LDNVSHTPSSYIETLPK	2	LDNVSHTPSSYIETLPK2	21376.6	23220	12119.8
Q5U2Z3	Q5U2Z3	NP1L4_RAT	Nap1l4	Nucleosome assembly protein 1-like 4	1	LDNVSHTPSSYIETLPK	LDNVSHTPSSYIETLPK	3	LDNVSHTPSSYIETLPK3	172310	175696	184486
Q5EB77	Q5EB77	RAB18_RAT	Rab18	Ras-related protein Rab-18	1	LDNWLNELETYCTR	LDNWLNELETYC(UniMod:4)TR	2	LDNWLNELETYC(UniMod:4)TR2	42305	34986.4	37215.9
Q5EB77	Q5EB77	RAB18_RAT	Rab18	Ras-related protein Rab-18	1	LDNWLNELETYCTR	LDNWLNELETYC(UniMod:4)TR	3	LDNWLNELETYC(UniMod:4)TR3	20868.8	18231.9	17796.9
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	LDPAAASSPTGESVISVDELISAMK	LDPAAASSPTGESVISVDELISAMK	3	LDPAAASSPTGESVISVDELISAMK3	17453.3	28515.8	19862.9
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	LDPALQDK	LDPALQDK	2	LDPALQDK2	149764	133481	144172
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LDPAQSASR	LDPAQSASR	2	LDPAQSASR2	406246	398373	382946
D3ZYF5	D3ZYF5	D3ZYF5_RAT	Trim58	Tripartite motif-containing 58	1	LDPATAHPSLLLTTDLR	LDPATAHPSLLLTTDLR	3	LDPATAHPSLLLTTDLR3	3868.5	3279.22	2241.27
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	LDPATGALYTSEK	LDPATGALYTSEK	2	LDPATGALYTSEK2	106073	92005.3	119351
Q566R0	Q566R0	THEM4_RAT	Them4	Acyl-coenzyme A thioesterase THEM4	1	LDPDKPLT	LDPDKPLT	2	LDPDKPLT2	21934.5	14423.5	19034.5
A0A8I6ASK1	A0A8I6ASK1	A0A8I6ASK1_RAT	P4ha2	procollagen-proline 4-dioxygenase	1	LDPDMISR	LDPDMISR	2	LDPDMISR2	122914	133238	110430
P97586	P97586	CGRE1_RAT	Cgref1	Cell growth regulator with EF hand domain protein 1	1	LDPEAQQQLTTNPFQPGPEQLR	LDPEAQQQLTTNPFQPGPEQLR	3	LDPEAQQQLTTNPFQPGPEQLR3	419173	442679	535504
P97586	P97586	CGRE1_RAT	Cgref1	Cell growth regulator with EF hand domain protein 1	1	LDPEAQQQLTTNPFQPGPEQLRR	LDPEAQQQLTTNPFQPGPEQLRR	3	LDPEAQQQLTTNPFQPGPEQLRR3	402974	584911	593199
P97586	P97586	CGRE1_RAT	Cgref1	Cell growth regulator with EF hand domain protein 1	1	LDPEAQQQLTTNPFQPGPEQLRR	LDPEAQQQLTTNPFQPGPEQLRR	4	LDPEAQQQLTTNPFQPGPEQLRR4	29252.4	47036	44593.6
Q7TP98	Q7TP98	ILF2_RAT	Ilf2	Interleukin enhancer-binding factor 2	1	LDPELHLDIK	LDPELHLDIK	3	LDPELHLDIK3	5625.96	5401.07	
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	LDPFESSDPFSSSSISSK	LDPFESSDPFSSSSISSK	2	LDPFESSDPFSSSSISSK2	3987.87		5614.29
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	LDPFQELVLESNSVDELR	LDPFQELVLESNSVDELR	3	LDPFQELVLESNSVDELR3			12897.1
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	LDPFQELVLESNSVDELREK	LDPFQELVLESNSVDELREK	3	LDPFQELVLESNSVDELREK3	14102.6	9888.21	16432.3
A0A8I5ZR58	A0A8I5ZR58	A0A8I5ZR58_RAT	Cux1-ps1	Protein CASP	1	LDPFSSFSK	LDPFSSFSK	2	LDPFSSFSK2	43305.3	29717.2	32390.5
P62076	P62076	TIM13_RAT	Timm13	Mitochondrial import inner membrane translocase subunit Tim13	1	LDPGAIMEQVK	LDPGAIMEQVK	2	LDPGAIMEQVK2	104989	92221.4	125259
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	LDPGAVSDVPEAIK	LDPGAVSDVPEAIK	2	LDPGAVSDVPEAIK2	83653.1	72228.8	82900.1
Q5U2R7	Q5U2R7	MESD_RAT	Mesd	LRP chaperone MESD	1	LDPGKPESILK	LDPGKPESILK	3	LDPGKPESILK3	85665.5	74628.9	77198.5
A0A8I6AIW6	A0A8I6AIW6	A0A8I6AIW6_RAT	Tmem222	Transmembrane protein 222	1	LDPGQVYASGPNAWDTAVHDASEEYK	LDPGQVYASGPNAWDTAVHDASEEYK	3	LDPGQVYASGPNAWDTAVHDASEEYK3	7317.46	5429.97	7353.41
Q68FR6	Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	1	LDPGSEETQTLVR	LDPGSEETQTLVR	2	LDPGSEETQTLVR2	3.63188e+06	3.6719e+06	3.6885e+06
Q68FR6	Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	1	LDPGSEETQTLVR	LDPGSEETQTLVR	3	LDPGSEETQTLVR3	17790	18868.3	23839.1
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	LDPGSSELQK	LDPGSSELQK	2	LDPGSSELQK2	155055	151494	164762
Q5RJK8	Q5RJK8	ACBD6_RAT	Acbd6	Acyl-CoA-binding domain-containing protein 6	1	LDPGWNPQVSEK	LDPGWNPQVSEK	2	LDPGWNPQVSEK2	16969.3	14759.4	
Q62812	Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	LDPHLVLDQLR	LDPHLVLDQLR	2	LDPHLVLDQLR2	8.97812e+06	9.63196e+06	9.76062e+06
Q62812	Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	LDPHLVLDQLR	LDPHLVLDQLR	3	LDPHLVLDQLR3	9.75441e+06	1.06931e+07	1.08798e+07
Q5PPG7	Q5PPG7	EIF2D_RAT	Eif2d	Eukaryotic translation initiation factor 2D	1	LDPILCDCILEK	LDPILC(UniMod:4)DC(UniMod:4)ILEK	2	LDPILC(UniMod:4)DC(UniMod:4)ILEK2	10217.6	12441.8	13439.5
Q68FS8	Q68FS8	Q68FS8_RAT	Rtca	RNA 3'-terminal-phosphate cyclase (ATP)	1	LDPINLTDR	LDPINLTDR	2	LDPINLTDR2	20270.3	22603.2	35179.9
Q6AYR2	A0A8I6ASR6;Q6AYR2	NDRG3_RAT	Ndrg3	Protein NDRG3	0	LDPINTTLLK	LDPINTTLLK	2	LDPINTTLLK2	34946.1	36625.6	29500.9
Q4AEG6	Q4AEG6	BMP10_RAT	Bmp10	Bone morphogenetic protein 10	1	LDPISILYLDK	LDPISILYLDK	2	LDPISILYLDK2	7777.69	13213.8	1591.98
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	LDPLESLDEPTR	LDPLESLDEPTR	2	LDPLESLDEPTR2	64278	87471	89097.9
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	LDPLIIAFDR	LDPLIIAFDR	2	LDPLIIAFDR2	16222.2	9519.07	12816.7
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	LDPLIIAFDRPFLMIISDTETAIAPFLAK	LDPLIIAFDRPFLMIISDTETAIAPFLAK	4	LDPLIIAFDRPFLMIISDTETAIAPFLAK4	3325.59	3912.28	
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	LDPQNHVLYSNR	LDPQNHVLYSNR	2	LDPQNHVLYSNR2	1523.71		
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	LDPQNHVLYSNR	LDPQNHVLYSNR	3	LDPQNHVLYSNR3	105783	73637.8	115852
B0BNI5	B0BNI5	OLFL3_RAT	Olfml3	Olfactomedin-like protein 3	1	LDPQTLDTEQQWDTPCPR	LDPQTLDTEQQWDTPC(UniMod:4)PR	3	LDPQTLDTEQQWDTPC(UniMod:4)PR3	12092.2	12946.4	11046.2
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	LDPSAVLDTAK	LDPSAVLDTAK	2	LDPSAVLDTAK2	23204.8	15058.8	18295.2
P60123	A0A0G2K0H9;P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	0	LDPSIFESLQK	LDPSIFESLQK	2	LDPSIFESLQK2	277123	229219	259894
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	LDPSPQTIYK	LDPSPQTIYK	2	LDPSPQTIYK2	201146	203886	238678
Q9JLU4	Q9JLU4	SHAN3_RAT	Shank3	SH3 and multiple ankyrin repeat domains protein 3	1	LDPTAPVWAAK	LDPTAPVWAAK	2	LDPTAPVWAAK2	17285.5	21652	32520.2
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	LDPTFASATLLFQK	LDPTFASATLLFQK	2	LDPTFASATLLFQK2	56324	61331.4	48777.4
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	LDPTFASATLLFQK	LDPTFASATLLFQK	3	LDPTFASATLLFQK3	1865.3	6316.69	3223.77
M0RBQ8	M0RBQ8	M0RBQ8_RAT	Dennd1c	DENN/MADD domain containing 1C	1	LDPTPSQSPCSR	LDPTPSQSPC(UniMod:4)SR	2	LDPTPSQSPC(UniMod:4)SR2	4009.33	13496.2	5330.06
Q8VBU2	Q8VBU2	NDRG2_RAT	Ndrg2	Protein NDRG2	1	LDPTQTSFLK	LDPTQTSFLK	2	LDPTQTSFLK2	16462.3	27519	20453.4
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	LDPTSITLQPMQIR	LDPTSITLQPMQIR	2	LDPTSITLQPMQIR2	17857.8	22876	20672.5
B2GUX8	B2GUX8	B2GUX8_RAT	Sh3bp5l	SH3 domain-binding protein 5	1	LDPTWQEMLNHATCK	LDPTWQEMLNHATC(UniMod:4)K	3	LDPTWQEMLNHATC(UniMod:4)K3	15039.2	9588.89	18147.1
A0A8I6A502	A0A8I6A502	A0A8I6A502_RAT	Tns3	Tensin 3	1	LDPVDGPGR	LDPVDGPGR	2	LDPVDGPGR2	58214.7	48460.9	51072.6
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	LDPVLYR	LDPVLYR	2	LDPVLYR2	90853.3	88111	103162
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LDPYVQR	LDPYVQR	2	LDPYVQR2	512995	543457	539475
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	LDQALVAEHIEK	LDQALVAEHIEK	2	LDQALVAEHIEK2	132073	124314	107068
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	LDQALVAEHIEK	LDQALVAEHIEK	3	LDQALVAEHIEK3	607486	704594	680194
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	LDQAVLDLK	LDQAVLDLK	2	LDQAVLDLK2	31757.3	24278.3	29989.1
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	LDQAVLDLKR	LDQAVLDLKR	2	LDQAVLDLKR2	1190.7		
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	LDQAVLDLKR	LDQAVLDLKR	3	LDQAVLDLKR3	4298.64	3815.09	2602.81
Q62918	Q62918	NELL2_RAT	Nell2	Protein kinase C-binding protein NELL2	1	LDQCYCER	LDQC(UniMod:4)YC(UniMod:4)ER	2	LDQC(UniMod:4)YC(UniMod:4)ER2	2958.26	3271.63	
P97531	P97531	CIP4_RAT	Trip10	Cdc42-interacting protein 4	1	LDQDINATK	LDQDINATK	2	LDQDINATK2	15581.7	8913.23	12848.9
Q1RP74	Q1RP74	Q1RP74_RAT	Tbcb	Tubulin folding cofactor B	1	LDQEDALLGSYPVDDGCR	LDQEDALLGSYPVDDGC(UniMod:4)R	3	LDQEDALLGSYPVDDGC(UniMod:4)R3	95268.3	98817.8	78590.1
Q91XJ1	Q91XJ1	BECN1_RAT	Becn1	Beclin-1	1	LDQEEAQYQR	LDQEEAQYQR	2	LDQEEAQYQR2	2910.67	2260.27	
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	LDQELKEQQK	LDQELKEQQK	2	LDQELKEQQK2		2935.9	
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	LDQELKEQQK	LDQELKEQQK	3	LDQELKEQQK3		22907.1	
Q5BJT7	Q5BJT7	CCD93_RAT	Ccdc93	Coiled-coil domain-containing protein 93	1	LDQEQAALEK	LDQEQAALEK	2	LDQEQAALEK2	10655.5	3778.51	8111.12
F7FLB2	F7FLB2	F7FLB2_RAT	Pgm2	phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	1	LDQETAQWLR	LDQETAQWLR	2	LDQETAQWLR2	8587.18	11392.4	12162.3
Q6IRE4	Q6IRE4	TS101_RAT	Tsg101	Tumor susceptibility gene 101 protein	1	LDQEVAEVDK	LDQEVAEVDK	2	LDQEVAEVDK2	45535.4	54465.4	49852
Q6IRE4	Q6IRE4	TS101_RAT	Tsg101	Tumor susceptibility gene 101 protein	1	LDQEVAEVDKNIELLK	LDQEVAEVDKNIELLK	3	LDQEVAEVDKNIELLK3	9004.81	4087.92	7954.03
Q6IRE4	Q6IRE4	TS101_RAT	Tsg101	Tumor susceptibility gene 101 protein	1	LDQEVAEVDKNIELLKK	LDQEVAEVDKNIELLKK	4	LDQEVAEVDKNIELLKK4	7255.03	7815.25	4600.44
A0A8I5ZK89	A0A8I5ZK89	A0A8I5ZK89_RAT	Dock5	Dedicator of cytokinesis 5	1	LDQEVEGGRGDEQYK	LDQEVEGGRGDEQYK	3	LDQEVEGGRGDEQYK3	5476.57	4558.45	15028.9
P00884	P00884	ALDOB_RAT	Aldob	Fructose-bisphosphate aldolase B	1	LDQGGAPLAGTNK	LDQGGAPLAGTNK	2	LDQGGAPLAGTNK2	4187.69		4689.54
Q8K581	Q8K581	TXND9_RAT	Txndc9	Thioredoxin domain-containing protein 9	1	LDQIGEDELELLK	LDQIGEDELELLK	2	LDQIGEDELELLK2	34269	41580.7	44482.8
Q8K581	Q8K581	TXND9_RAT	Txndc9	Thioredoxin domain-containing protein 9	1	LDQIGEDELELLKEK	LDQIGEDELELLKEK	3	LDQIGEDELELLKEK3	3073.89	5104.5	3816.19
Q498U1	Q498U1;A0A8I5ZW97	Q498U1_RAT	Abcg3l4	ATP-binding cassette, subfamily G (WHITE), member 3-like 4	0	LDQILGQQQLDR	LDQILGQQQLDR	2	LDQILGQQQLDR2	13083.9	12295.2	14137.6
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	LDQIPEHQR	LDQIPEHQR	2	LDQIPEHQR2	9040.66	3685.55	7581.19
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	LDQLIEFYK	LDQLIEFYK	2	LDQLIEFYK2	63265.2	57011.1	59201.7
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	LDQLIYIPLPDEK	LDQLIYIPLPDEK	2	LDQLIYIPLPDEK2	1.34436e+06	1.74315e+06	1.69203e+06
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	LDQLIYIPLPDEK	LDQLIYIPLPDEK	3	LDQLIYIPLPDEK3	36660.9	28647.5	33214.1
A0A8I6ACK9	A0A8I6ACK9	A0A8I6ACK9_RAT	Abcg3l3	ATP-binding cassette, subfamily G (WHITE), member 3-like 3	1	LDQLLGEQK	LDQLLGEQK	2	LDQLLGEQK2	18664.6	12751.2	15493.5
A0A8I6A0D0	A0A8I6A0D0	A0A8I6A0D0_RAT	Abcg3	ATP-binding cassette, subfamily G (WHITE), member 3	1	LDQLLGQQQLDR	LDQLLGQQQLDR	2	LDQLLGQQQLDR2	13083.9	12295.2	14137.6
D3ZRC4	D3ZRC4	PLPL8_RAT	Pnpla8	Calcium-independent phospholipase A2-gamma	1	LDQLQLEGMK	LDQLQLEGMK	2	LDQLQLEGMK2	12160	14295.5	12789.7
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LDQMVFFWEDIK	LDQMVFFWEDIK	2	LDQMVFFWEDIK2	22036.1	22331.7	23106
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	LDQNIQVPGALLARPEEDSQFPER	LDQNIQVPGALLARPEEDSQFPER	3	LDQNIQVPGALLARPEEDSQFPER3	42213.7	31375.1	34193.8
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	LDQPANLLR	LDQPANLLR	2	LDQPANLLR2	18132.2	12421.2	19740.3
Q5U300	Q5U300;A0A8I5ZVX0;A0A8I6A544	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	0	LDQPMTEIVSR	LDQPMTEIVSR	2	LDQPMTEIVSR2	349510	322866	287489
D4AEK9	D4AEK9	D4AEK9_RAT	Ccdc6	Coiled-coil domain containing 6	1	LDQPVSAPPSPR	LDQPVSAPPSPR	2	LDQPVSAPPSPR2	48210.7	53183.1	43868.4
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	LDQTMSALK	LDQTMSALK	2	LDQTMSALK2	97787	88704.4	99824.5
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	LDQTMSALKR	LDQTMSALKR	2	LDQTMSALKR2	3287.58	1614.05	
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	LDQTMSALKR	LDQTMSALKR	3	LDQTMSALKR3	20005.9	19339.6	26693.2
O35568	O35568	FBLN3_RAT	Efemp1	EGF-containing fibulin-like extracellular matrix protein 1	1	LDQVCINLR	LDQVC(UniMod:4)INLR	2	LDQVC(UniMod:4)INLR2	83680.2	90840.1	65910.7
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	LDQVLQWNR	LDQVLQWNR	2	LDQVLQWNR2	413597	371143	428289
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	LDQVLQWNR	LDQVLQWNR	3	LDQVLQWNR3	4321.92	6650.36	5119.8
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	LDQVSQFGCR	LDQVSQFGC(UniMod:4)R	2	LDQVSQFGC(UniMod:4)R2	53202.7	68110.7	44817.2
Q66H59	Q66H59	NPL_RAT	Npl	N-acetylneuraminate lyase	1	LDQVVIHVGALNLK	LDQVVIHVGALNLK	2	LDQVVIHVGALNLK2	1160.57	2139.19	4847.09
Q66H59	Q66H59	NPL_RAT	Npl	N-acetylneuraminate lyase	1	LDQVVIHVGALNLK	LDQVVIHVGALNLK	3	LDQVVIHVGALNLK3	34947	47438	35732.4
P54921	P85969;P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	0	LDQWLTTMLLR	LDQWLTTMLLR	2	LDQWLTTMLLR2	72938.6	61409.8	57471
P54921	P85969;P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	0	LDQWLTTMLLR	LDQWLTTMLLR	3	LDQWLTTMLLR3	11883.5	4061.86	6259.36
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	LDRANEEIAQVR	LDRANEEIAQVR	3	LDRANEEIAQVR3	1855.22	8500.16	13414
A0A8I5ZSB0	A0A8I5ZSB0	A0A8I5ZSB0_RAT	Igtp	Interferon gamma induced GTPase	1	LDRDISTSTFPEPQLLQSIQK	LDRDISTSTFPEPQLLQSIQK	3	LDRDISTSTFPEPQLLQSIQK3	17008.7	13469.1	12973.7
Q6AYC2	Q6AYC2	IRGM_RAT	Irgm	Immunity-related GTPase family M protein	1	LDRDLSTSVLSEVR	LDRDLSTSVLSEVR	3	LDRDLSTSVLSEVR3	9794.44	9225.31	8899.19
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LDRDPASGTALQEISFWLNLER	LDRDPASGTALQEISFWLNLER	3	LDRDPASGTALQEISFWLNLER3	13962.5	20194.1	16350.5
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	LDRDSLVHSSPHVALSHVDTR	LDRDSLVHSSPHVALSHVDTR	4	LDRDSLVHSSPHVALSHVDTR4	2272.82	8871.62	5434.76
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	LDRDVEVEDFQR	LDRDVEVEDFQR	3	LDRDVEVEDFQR3	33455.2	37415.8	46258.9
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	LDREIYNFLK	LDREIYNFLK	3	LDREIYNFLK3	6739.73	7954.12	5644.79
P69736	P69736;A0A8I6APN7	EDF1_RAT	Edf1	Endothelial differentiation-related factor 1	0	LDRETEELHHDR	LDRETEELHHDR	3	LDRETEELHHDR3	6765.79		1294.36
P69736	P69736;A0A8I6APN7	EDF1_RAT	Edf1	Endothelial differentiation-related factor 1	0	LDRETEELHHDR	LDRETEELHHDR	4	LDRETEELHHDR4	20354.4		9862.5
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	LDRLEETVQAK	LDRLEETVQAK	2	LDRLEETVQAK2	13783.1	12682	12155.3
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	LDRLETFLR	LDRLETFLR	3	LDRLETFLR3	24918.8	33904.9	25318.1
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	LDRTEIITFTAMMK	LDRTEIITFTAMMK	3	LDRTEIITFTAMMK3	13761	12623.1	11448.8
D3ZVN7	D3ZVN7	D3ZVN7_RAT	Ppox	Amine oxidase	1	LDSALQFLTAQR	LDSALQFLTAQR	2	LDSALQFLTAQR2	8372.99	5425.38	3769.35
P15650	P15650	ACADL_RAT	Acadl	Long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	LDSASASMAK	LDSASASMAK	2	LDSASASMAK2	30461.4	22703.3	21391.4
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	LDSEACEVLFSK	LDSEAC(UniMod:4)EVLFSK	2	LDSEAC(UniMod:4)EVLFSK2	848.673	2151.36	2600.4
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	LDSELTAR	LDSELTAR	2	LDSELTAR2	311028	352506	294239
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	LDSEPSEPAK	LDSEPSEPAK	2	LDSEPSEPAK2	109580	87193.9	117721
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	LDSEPSEPAKENQESR	LDSEPSEPAKENQESR	3	LDSEPSEPAKENQESR3		99695.8	90994.9
Q5U2R3	Q5U2R3	FRMD8_RAT	Frmd8	FERM domain-containing protein 8	1	LDSFLPAHLCK	LDSFLPAHLC(UniMod:4)K	2	LDSFLPAHLC(UniMod:4)K2	3964.88		
Q5U2R3	Q5U2R3	FRMD8_RAT	Frmd8	FERM domain-containing protein 8	1	LDSFLPAHLCK	LDSFLPAHLC(UniMod:4)K	3	LDSFLPAHLC(UniMod:4)K3	11469.2	11585.5	11944.9
P97535	P97535	PLA1A_RAT	Pla1a	Phospholipase A1 member A	1	LDSGDALFVEAIHTDTDNLGIR	LDSGDALFVEAIHTDTDNLGIR	3	LDSGDALFVEAIHTDTDNLGIR3	63145.8	47956.5	54119.2
Q9WUD9	Q9WUD9	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	1	LDSGGFYITSR	LDSGGFYITSR	2	LDSGGFYITSR2	131255	123954	144726
A0A8I5ZY02	A0A8I5ZY02	A0A8I5ZY02_RAT	ENSRNOG00000070192	Ig-like domain-containing protein	1	LDSGIPDR	LDSGIPDR	2	LDSGIPDR2	108506	87291.4	95250
Q9QY17	Q9QY17	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	1	LDSGQVGLYPANYVEAIQ	LDSGQVGLYPANYVEAIQ	2	LDSGQVGLYPANYVEAIQ2	23939.1	17080.5	22919.8
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	LDSGSFSSTSR	LDSGSFSSTSR	2	LDSGSFSSTSR2	5289.42	10365.7	6208.5
A0A8I5ZTK7	A0A8I6AAM9;A0A8I5ZTK7	A0A8I5ZTK7_RAT	ENSRNOG00000069828	Ig-like domain-containing protein	0	LDSGVPDR	LDSGVPDR	2	LDSGVPDR2	317892	241843	263283
A0A8I5ZTK7	A0A8I5ZTK7	A0A8I5ZTK7_RAT	ENSRNOG00000069828	Ig-like domain-containing protein	1	LDSGVPDRFSGSGSETEFTLK	LDSGVPDRFSGSGSETEFTLK	3	LDSGVPDRFSGSGSETEFTLK3	4493.29	8543.87	
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	LDSHFSGLFNYR	LDSHFSGLFNYR	3	LDSHFSGLFNYR3	28149.1	19340	30673.5
Q4V885	Q4V885	COL12_RAT	Colec12	Collectin-12	1	LDSISLR	LDSISLR	2	LDSISLR2	6388.63	7850.79	7598.74
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	LDSLASDHQK	LDSLASDHQK	2	LDSLASDHQK2	54951.7	52102.8	52327.6
A0A8I6AT07	M0R4Q5;A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	0	LDSLDVESEK	LDSLDVESEK	2	LDSLDVESEK2	10051.9	12224.1	6857.05
B1WBZ6	B1WBZ6	B1WBZ6_RAT	RGD1565685	RGD1565685 protein	1	LDSLHLQHQK	LDSLHLQHQK	3	LDSLHLQHQK3	43351.6	36225.2	30965.1
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	LDSLHPDLIYNVSWNHNGSLFCTACK	LDSLHPDLIYNVSWNHNGSLFC(UniMod:4)TAC(UniMod:4)K	4	LDSLHPDLIYNVSWNHNGSLFC(UniMod:4)TAC(UniMod:4)K4	84928.6	76113.2	96754.6
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LDSLQAR	LDSLQAR	2	LDSLQAR2	113030	127263	122827
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	LDSLQTLNACCAVYGQK	LDSLQTLNAC(UniMod:4)C(UniMod:4)AVYGQK	2	LDSLQTLNAC(UniMod:4)C(UniMod:4)AVYGQK2	8987.93	4299.07	4518.06
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	LDSLQTLNACCAVYGQK	LDSLQTLNAC(UniMod:4)C(UniMod:4)AVYGQK	3	LDSLQTLNAC(UniMod:4)C(UniMod:4)AVYGQK3	8111.54	1893.3	2090.07
Q6AYI5	Q6AYI5	SHOC2_RAT	Shoc2	Leucine-rich repeat protein SHOC-2	1	LDSLTTLYLR	LDSLTTLYLR	2	LDSLTTLYLR2	6305.65	13912.5	11591.7
Q9QZH4	Q9QZH4	AAKB2_RAT	Prkab2	5'-AMP-activated protein kinase subunit beta-2	1	LDSMESSETSCR	LDSMESSETSC(UniMod:4)R	2	LDSMESSETSC(UniMod:4)R2	2748.01	1636.14	3613.19
A0A8I6G3S1	A0A8I6G3S1	A0A8I6G3S1_RAT	Mon1b	Vacuolar fusion protein MON1 homolog	1	LDSMPVCLLLLGTNR	LDSMPVC(UniMod:4)LLLLGTNR	2	LDSMPVC(UniMod:4)LLLLGTNR2	47831	6630.13	
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	LDSMSPQLSPGSSLTTQAAEPLK	LDSMSPQLSPGSSLTTQAAEPLK	3	LDSMSPQLSPGSSLTTQAAEPLK3	9404.8	11641.4	3918.62
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	LDSNALHCDCEILWLADLLK	LDSNALHC(UniMod:4)DC(UniMod:4)EILWLADLLK	3	LDSNALHC(UniMod:4)DC(UniMod:4)EILWLADLLK3	5795.59	7079.99	5565.81
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	LDSNFEVNFDKVPMEMR	LDSNFEVNFDKVPMEMR	3	LDSNFEVNFDKVPMEMR3	11436.4	12008.3	16761.5
A0A096MJF9	A0A096MJF9	A0A096MJF9_RAT	Tmem132e	Transmembrane protein 132E	1	LDSNLMIR	LDSNLMIR	2	LDSNLMIR2	13260.8	19923.4	16692.5
D3ZYT6	D3ZYT6	D3ZYT6_RAT	Treml1	Triggering receptor expressed on myeloid cells-like 1	1	LDSPPSFDSIYTDPSLDPPSR	LDSPPSFDSIYTDPSLDPPSR	3	LDSPPSFDSIYTDPSLDPPSR3	1.77062e+06	1.96615e+06	2.22794e+06
P26431	P26431	SL9A1_RAT	Slc9a1	Sodium/hydrogen exchanger 1	1	LDSPTMSR	LDSPTMSR	2	LDSPTMSR2	26059.5	26283.3	23750.5
Q5RJR2	Q5RJR2	TWF1_RAT	Twf1	Twinfilin-1	1	LDSQNAQGYEWIFIAWSPDHSHVR	LDSQNAQGYEWIFIAWSPDHSHVR	4	LDSQNAQGYEWIFIAWSPDHSHVR4	6311.5	9071.16	8793.84
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	LDSRPFCSGR	LDSRPFC(UniMod:4)SGR	2	LDSRPFC(UniMod:4)SGR2	171215	139958	114141
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	LDSRPFCSGR	LDSRPFC(UniMod:4)SGR	3	LDSRPFC(UniMod:4)SGR3	1.74017e+06	1.80143e+06	2.20352e+06
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	LDSSDPFK	LDSSDPFK	2	LDSSDPFK2	125910	105562	135338
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	LDSSDPFKLNDPFQPFPGNDSPK	LDSSDPFKLNDPFQPFPGNDSPK	3	LDSSDPFKLNDPFQPFPGNDSPK3	12435.7	13888.1	14342
Q4V8A2	Q4V8A2	CDC27_RAT	Cdc27	Cell division cycle protein 27 homolog	1	LDSSIISEGK	LDSSIISEGK	2	LDSSIISEGK2	14043.7	15237.8	15267.5
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	LDSTDIYNELK	LDSTDIYNELK	2	LDSTDIYNELK2	24667.9	26981	27449.8
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	LDSTDIYNELKETYPAYLPLYVAR	LDSTDIYNELKETYPAYLPLYVAR	3	LDSTDIYNELKETYPAYLPLYVAR3	33333.3	29832.2	36970.3
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	LDSTQAGEFLGDNDK	LDSTQAGEFLGDNDK	2	LDSTQAGEFLGDNDK2	11741.1	11145.5	8532.72
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	LDSTQAGEFLGDNDKFNK	LDSTQAGEFLGDNDKFNK	3	LDSTQAGEFLGDNDKFNK3	16856.4	25272.5	23243
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	LDSTQVGEFLGDSTR	LDSTQVGEFLGDSTR	2	LDSTQVGEFLGDSTR2	44404.8	50056.7	39193.9
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	LDSTQVGEFLGDSTR	LDSTQVGEFLGDSTR	3	LDSTQVGEFLGDSTR3	3362.24	5283.28	10323.7
Q66HG5	Q66HG5	TM9S2_RAT	Tm9sf2	Transmembrane 9 superfamily member 2	1	LDSVESVLPYEYTAFDFCQASEGK	LDSVESVLPYEYTAFDFC(UniMod:4)QASEGK	3	LDSVESVLPYEYTAFDFC(UniMod:4)QASEGK3	16822.8	15095.9	18532.8
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	LDSVKPSEK	LDSVKPSEK	2	LDSVKPSEK2	29319.7		13691
D3ZBP3	D3ZBP3	D3ZBP3_RAT	Exosc2	Ribosomal RNA-processing protein 4	1	LDSVLLLSSMNLPGGELR	LDSVLLLSSMNLPGGELR	2	LDSVLLLSSMNLPGGELR2	4149.06	10233.4	2755.78
Q6MG56	Q6MG56	LY66F_RAT	Ly6g6f	Lymphocyte antigen 6 complex locus protein G6f	1	LDSVTWLEGR	LDSVTWLEGR	2	LDSVTWLEGR2	104889	102077	105147
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	LDSVVSGFSLK	LDSVVSGFSLK	2	LDSVVSGFSLK2	22415.9	29305.6	27263.4
Q9Z142	Q9Z142	TMM33_RAT	Tmem33	Transmembrane protein 33	1	LDTAMWLSR	LDTAMWLSR	2	LDTAMWLSR2	9183.79	6202.21	9517.34
B4F7E7	B4F7E7	PALS1_RAT	Pals1	Protein PALS1	1	LDTEPQWVPSTWLR	LDTEPQWVPSTWLR	2	LDTEPQWVPSTWLR2	10649.7	15495.6	15989.6
P51111	P51111	HD_RAT	Htt	Huntingtin	1	LDTESLVK	LDTESLVK	2	LDTESLVK2	61013.5	90347.8	65671.8
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	LDTGIDR	LDTGIDR	2	LDTGIDR2	52858.3	41850.4	52635
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	LDTHPAMVTVLEMGAAR	LDTHPAMVTVLEMGAAR	3	LDTHPAMVTVLEMGAAR3	33872.9	33692.3	40766.2
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LDTHSPSIFQNLDQLK	LDTHSPSIFQNLDQLK	2	LDTHSPSIFQNLDQLK2	19890.1	19764.9	13774.3
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LDTHSPSIFQNLDQLK	LDTHSPSIFQNLDQLK	3	LDTHSPSIFQNLDQLK3	108775	126988	102286
Q1HAQ0	Q1HAQ0	PCAT1_RAT	Lpcat1	Lysophosphatidylcholine acyltransferase 1	1	LDTITWTWQGPGALK	LDTITWTWQGPGALK	2	LDTITWTWQGPGALK2	7180.54	5575.97	
D4A9N5	D4A9N5	D4A9N5_RAT	Trim25	Tripartite motif-containing 25	1	LDTIYQVLLK	LDTIYQVLLK	2	LDTIYQVLLK2	36862.4	43279.5	41291.5
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	LDTLETACEVHEILEVLDGR	LDTLETAC(UniMod:4)EVHEILEVLDGR	3	LDTLETAC(UniMod:4)EVHEILEVLDGR3	8135.97	7340.35	8419.06
Q6P7B4	Q6P7B4	GAK1B_RAT	Gask1b	Golgi-associated kinase 1B	1	LDTNCCGFRPR	LDTNC(UniMod:4)C(UniMod:4)GFRPR	3	LDTNC(UniMod:4)C(UniMod:4)GFRPR3	24667.9	33421.4	33433.9
Q00238	Q00238	ICAM1_RAT	Icam1	Intercellular adhesion molecule 1	1	LDTPDLLEVGTQQK	LDTPDLLEVGTQQK	2	LDTPDLLEVGTQQK2	4483.17	2974.64	3021.36
D3ZDR5	D3ZDR5	D3ZDR5_RAT	Prmt9	Protein arginine methyltransferase 9	1	LDTSGEASHWK	LDTSGEASHWK	3	LDTSGEASHWK3	4227.21	2443.77	
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	LDTVAGGLQGLR	LDTVAGGLQGLR	2	LDTVAGGLQGLR2	244606	261133	240468
D4ACF2	D4ACF2	D4ACF2_RAT	Trim21	RING-type E3 ubiquitin transferase	1	LDTVDVDSPDLTSTCHVPGR	LDTVDVDSPDLTSTC(UniMod:4)HVPGR	3	LDTVDVDSPDLTSTC(UniMod:4)HVPGR3	5137.92	7214.47	4055.23
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	LDTVGSDAYR	LDTVGSDAYR	2	LDTVGSDAYR2	24097.9	21620.1	20548.8
D4A7H9	D4A7H9	D4A7H9_RAT	Chmp7	Charged multivesicular body protein 7	1	LDTVQGILDR	LDTVQGILDR	2	LDTVQGILDR2	18608	24563.2	15489
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	LDTVVEFPVR	LDTVVEFPVR	2	LDTVVEFPVR2	84341.5	84786.6	66297.6
E9PTA5	E9PTA5	E9PTA5_RAT	Pign	GPI ethanolamine phosphate transferase 1	1	LDTWVFDK	LDTWVFDK	2	LDTWVFDK2	16014.8	21465	15095.3
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	LDTYEILIQK	LDTYEILIQK	2	LDTYEILIQK2	37225.3	49999.5	44567.1
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	LDVDWKELNELGSK	LDVDWKELNELGSK	3	LDVDWKELNELGSK3	1111.02	2592.85	7014.29
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	LDVEFKPLEPDGILLFSGGK	LDVEFKPLEPDGILLFSGGK	3	LDVEFKPLEPDGILLFSGGK3	5839.13	5765.83	9408.12
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	LDVETWQQEQPVVLHTWTK	LDVETWQQEQPVVLHTWTK	3	LDVETWQQEQPVVLHTWTK3	17056.4	29189.3	21363.1
P62243	Q6TXJ0;P62243;M0R7Q5	RS8_RAT	Rps8	Small ribosomal subunit protein eS8	0	LDVGNFSWGSECCTR	LDVGNFSWGSEC(UniMod:4)C(UniMod:4)TR	2	LDVGNFSWGSEC(UniMod:4)C(UniMod:4)TR2	7579.95	9175.94	13431.5
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	LDVGSPEMK	LDVGSPEMK	1	LDVGSPEMK1	49256.3	43138	42466.8
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	LDVGSPEMK	LDVGSPEMK	2	LDVGSPEMK2	1.14102e+06	1.20764e+06	1.24554e+06
P05369	P05369	FPPS_RAT	Fdps	Farnesyl pyrophosphate synthase	1	LDVHNQEK	LDVHNQEK	2	LDVHNQEK2			15597.3
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	LDVLAHVFESFLK	LDVLAHVFESFLK	3	LDVLAHVFESFLK3	3736.41	9808.42	10339
D3ZUU6	D3ZUU6	D3ZUU6_RAT	Clec3b	C-type lectin domain family 3, member B	1	LDVLAQEVALLK	LDVLAQEVALLK	2	LDVLAQEVALLK2	23564.5	25924.5	11590.6
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	LDVLETQR	LDVLETQR	2	LDVLETQR2	77293	69012.6	82202.8
Q498D5	Q498D5	RMD2_RAT	Rmdn2	Regulator of microtubule dynamics protein 2	1	LDVLLQK	LDVLLQK	2	LDVLLQK2	7983.41	13732.8	7948.8
Q6AXY8	Q6AXY8	Q6AXY8_RAT	Dhrs1	Dehydrogenase/reductase 1	1	LDVLVNNAYAGVQAILNTTTK	LDVLVNNAYAGVQAILNTTTK	3	LDVLVNNAYAGVQAILNTTTK3	3783.6	3304.21	5952.05
O35112	O35112	CD166_RAT	Alcam	CD166 antigen	1	LDVPQNLMFGK	LDVPQNLMFGK	2	LDVPQNLMFGK2	10567.2	13267.5	20208.6
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	LDVQFSGLAK	LDVQFSGLAK	2	LDVQFSGLAK2	269492	210128	213256
D3ZLN7	D3ZLN7	D3ZLN7_RAT	Commd2	COMM domain containing 2	1	LDVQLASR	LDVQLASR	2	LDVQLASR2	17142.7	15236.9	19964.3
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	LDVSIEMPEELDISQLR	LDVSIEMPEELDISQLR	3	LDVSIEMPEELDISQLR3	16885.5	28997.4	23610.8
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	LDVSSVASDTER	LDVSSVASDTER	2	LDVSSVASDTER2	17696.5	9039.33	11796.3
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	LDVSSVASDTERFELK	LDVSSVASDTERFELK	3	LDVSSVASDTERFELK3	24769.4	27444.6	14033.1
F1LNX8	F1LNX8	F1LNX8_RAT	Cmahp	Cytidine monophosphate-N-acetylneuraminic acid hydroxylase	1	LDVSTMK	LDVSTMK	2	LDVSTMK2	21860.6	10575.7	21954.3
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	LDVSVPR	LDVSVPR	2	LDVSVPR2	81198.6	72202.4	58376.7
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	LDVSYEPMIVK	LDVSYEPMIVK	2	LDVSYEPMIVK2	13436	18227.3	17352
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	LDVTILSPSR	LDVTILSPSR	2	LDVTILSPSR2	4007.46	6402.19	
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	LDVTLCPGDVAGIGWER	LDVTLC(UniMod:4)PGDVAGIGWER	2	LDVTLC(UniMod:4)PGDVAGIGWER2	8163.83	9328.77	11346.7
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	LDVTLGDLTK	LDVTLGDLTK	2	LDVTLGDLTK2	19764.9	16417.8	13993
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	LDVTPIR	LDVTPIR	2	LDVTPIR2	2.62264e+06	2.74143e+06	2.71415e+06
Q5XIF3	Q5XIF3	NDUS4_RAT	Ndufs4	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial	1	LDVTPLTGVPEEHIK	LDVTPLTGVPEEHIK	2	LDVTPLTGVPEEHIK2	2966.83	4226.65	
Q5XIF3	Q5XIF3	NDUS4_RAT	Ndufs4	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial	1	LDVTPLTGVPEEHIK	LDVTPLTGVPEEHIK	3	LDVTPLTGVPEEHIK3	106566	105695	132701
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	LDVTSVEDYK	LDVTSVEDYK	2	LDVTSVEDYK2	355673	339353	333602
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	LDVVAGSVTVLSGR	LDVVAGSVTVLSGR	2	LDVVAGSVTVLSGR2	13708.6	12872	16449.7
Q4V884	Q4V884	Q4V884_RAT	Cdc16	CDC16 cell division cycle 16 homolog (S. cerevisiae)	1	LDVYCFEAFDLLTSHHMLTAQEEK	LDVYC(UniMod:4)FEAFDLLTSHHMLTAQEEK	4	LDVYC(UniMod:4)FEAFDLLTSHHMLTAQEEK4	6330.94		4401.77
Q66H54	Q66H54	FHI1B_RAT	Fhip1b	FHF complex subunit HOOK-interacting protein 1B	1	LDWAEGPTAGPTPR	LDWAEGPTAGPTPR	2	LDWAEGPTAGPTPR2	3899.64	5282.65	
B2GV54	B2GV54	NCEH1_RAT	Nceh1	Neutral cholesterol ester hydrolase 1	1	LDWTSLLPSSIK	LDWTSLLPSSIK	2	LDWTSLLPSSIK2	58443.2	67025.9	50962.6
B2GV54	B2GV54	NCEH1_RAT	Nceh1	Neutral cholesterol ester hydrolase 1	1	LDWTSLLPSSIKK	LDWTSLLPSSIKK	3	LDWTSLLPSSIKK3	4824.19	8078.61	7911.96
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	LDWVYGYR	LDWVYGYR	2	LDWVYGYR2	72038.7	64786.7	66016.9
P50503	P50503	F10A1_RAT	St13	Hsc70-interacting protein	1	LDYDEDASAMLR	LDYDEDASAMLR	2	LDYDEDASAMLR2	102128	97579.8	108875
P70619	P70619	GSHR_RAT	Gsr	Glutathione reductase (Fragment)	1	LDYDNIPTVVFSHPPIGTVGLTEDEAVHK	LDYDNIPTVVFSHPPIGTVGLTEDEAVHK	4	LDYDNIPTVVFSHPPIGTVGLTEDEAVHK4	3819.21	6092.54	3058.45
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	LDYECHIGYENEYK	LDYEC(UniMod:4)HIGYENEYK	2	LDYEC(UniMod:4)HIGYENEYK2	15758.6	11706.6	14919.1
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	LDYECHIGYENEYK	LDYEC(UniMod:4)HIGYENEYK	3	LDYEC(UniMod:4)HIGYENEYK3	218839	206977	221673
A0A0G2K975	A0A0G2K975	A0A0G2K975_RAT	Cfhr4	Similar to complement factor H-related protein	1	LDYECHIGYENK	LDYEC(UniMod:4)HIGYENK	3	LDYEC(UniMod:4)HIGYENK3	14345.6		3653.63
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	LDYECHIGYK	LDYEC(UniMod:4)HIGYK	2	LDYEC(UniMod:4)HIGYK2	100611	73172.7	76265
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	LDYECHIGYK	LDYEC(UniMod:4)HIGYK	3	LDYEC(UniMod:4)HIGYK3	635451	474698	464434
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	LDYEEITPCLK	LDYEEITPC(UniMod:4)LK	2	LDYEEITPC(UniMod:4)LK2	35798.3	32027.6	29869.8
D3ZGN0	D3ZGN0	D3ZGN0_RAT	Tbc1d4	TBC1 domain family, member 4	1	LDYEEVGTCQK	LDYEEVGTC(UniMod:4)QK	2	LDYEEVGTC(UniMod:4)QK2	4834.22	2385.7	2905.71
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	LDYESMER	LDYESMER	2	LDYESMER2	107916	100057	88222.9
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	LDYFHNGNPR	LDYFHNGNPR	3	LDYFHNGNPR3	11880.3	5174.01	6613.54
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	LDYGDVIPMAEAAGIIR	LDYGDVIPMAEAAGIIR	2	LDYGDVIPMAEAAGIIR2	34699.9	31061.9	32037
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	LDYGDVIPMAEAAGIIR	LDYGDVIPMAEAAGIIR	3	LDYGDVIPMAEAAGIIR3	3903.46	4323.06	
P19511	P19511	AT5F1_RAT	Atp5pb	ATP synthase F(0) complex subunit B1, mitochondrial	1	LDYHISVQDMMR	LDYHISVQDMMR	2	LDYHISVQDMMR2	34442.1	16426.9	30095.2
P19511	P19511	AT5F1_RAT	Atp5pb	ATP synthase F(0) complex subunit B1, mitochondrial	1	LDYHISVQDMMR	LDYHISVQDMMR	3	LDYHISVQDMMR3	186228	156534	152484
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	LDYHMSQSEK	LDYHMSQSEK	3	LDYHMSQSEK3	6498.87	5616.12	14381
M0R8P6	M0R8P6	M0R8P6_RAT	Wwc3	Uncharacterized protein	1	LDYHQEQVAEK	LDYHQEQVAEK	3	LDYHQEQVAEK3	7430.41	6039.73	19241.2
P29314	D3ZV50;P29314	RS9_RAT	Rps9	Small ribosomal subunit protein uS4	0	LDYILGLK	LDYILGLK	2	LDYILGLK2	86536.3	86016.9	84419.8
Q6MGC4	Q6MGC4	Q6MGC4_RAT	Pfdn6	Prefoldin subunit 6	1	LDYITAEIK	LDYITAEIK	2	LDYITAEIK2	4816.69	4303.24	6273.14
A0A0G2JYR4	A0A8I6AP41;A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	0	LDYWEDDLR	LDYWEDDLR	2	LDYWEDDLR2	25103.1	25299.9	19298
A0A0G2JYR4	A0A8I6AP41;A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	0	LDYWEDDLRR	LDYWEDDLRR	3	LDYWEDDLRR3	44084.4	25204	31072.8
A0A0G2K8N6	A0A0G2K8N6	A0A0G2K8N6_RAT	Ankmy2	Ankyrin repeat and MYND domain containing 2	1	LDYYTKPQGLDKEPK	LDYYTKPQGLDKEPK	3	LDYYTKPQGLDKEPK3	5237.11	2340.7	
P50878	P50878	RL4_RAT	Rpl4	Large ribosomal subunit protein uL4	1	LEAAAAALAAK	LEAAAAALAAK	2	LEAAAAALAAK2	16580.4	18862.9	15132.4
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	LEAAAQVR	LEAAAQVR	2	LEAAAQVR2	72473.3	51428.4	64138.3
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	LEAADEGSGDMK	LEAADEGSGDMK	2	LEAADEGSGDMK2	141425	129272	137202
P67779	P67779;A0A8I5ZUY9	PHB1_RAT	Phb1	Prohibitin 1	0	LEAAEDIAYQLSR	LEAAEDIAYQLSR	2	LEAAEDIAYQLSR2	93165.8	79521.9	82830.7
P67779	P67779;A0A8I5ZUY9	PHB1_RAT	Phb1	Prohibitin 1	0	LEAAEDIAYQLSR	LEAAEDIAYQLSR	3	LEAAEDIAYQLSR3	29118.4	30993.6	30939.2
Q4QQS7	Q4QQS7	Q4QQS7_RAT	Umps	Uridine 5'-monophosphate synthase	1	LEAAEMYR	LEAAEMYR	2	LEAAEMYR2	8456.68	3350.27	8631.55
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	LEAAETLEECALR	LEAAETLEEC(UniMod:4)ALR	2	LEAAETLEEC(UniMod:4)ALR2	24543.3	14416.8	20603.1
A0A8I5Y868	A0A8I5Y868	A0A8I5Y868_RAT	Klc2	Kinesin light chain	1	LEAAHTLEDCASR	LEAAHTLEDC(UniMod:4)ASR	2	LEAAHTLEDC(UniMod:4)ASR2	2029.62		
A0A8I5Y868	A0A8I5Y868	A0A8I5Y868_RAT	Klc2	Kinesin light chain	1	LEAAHTLEDCASR	LEAAHTLEDC(UniMod:4)ASR	3	LEAAHTLEDC(UniMod:4)ASR3	10496.1	15760	14372.5
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	LEAALGEAK	LEAALGEAK	2	LEAALGEAK2	143993	130493	142611
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	LEAASSALGGPTLTHAVTR	LEAASSALGGPTLTHAVTR	3	LEAASSALGGPTLTHAVTR3	52027.4	65547.2	37797.5
Q6PEC1	Q6PEC1	TBCA_RAT	Tbca	Tubulin-specific chaperone A	1	LEAAYTDLR	LEAAYTDLR	2	LEAAYTDLR2	30809.8	28236.9	21775.2
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	LEADDYLK	LEADDYLK	2	LEADDYLK2		27700.8	26531.3
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	LEADYDKK	LEADYDKK	2	LEADYDKK2	4423.77	2945.25	
Q9JLZ1	Q9JLZ1	GLRX3_RAT	Glrx3	Glutaredoxin-3	1	LEAEAVPEVSEK	LEAEAVPEVSEK	2	LEAEAVPEVSEK2	151284	142753	151845
Q68FT9	Q68FT9	SCLY_RAT	Scly	Selenocysteine lyase	1	LEAEFGK	LEAEFGK	1	LEAEFGK1	2602.85	3437.44	3561.66
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LEAELAAHEPAIQGVLDTGK	LEAELAAHEPAIQGVLDTGK	3	LEAELAAHEPAIQGVLDTGK3	26599.3	13498.2	18242.2
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LEAELAAHEPAIQGVLDTGKK	LEAELAAHEPAIQGVLDTGKK	4	LEAELAAHEPAIQGVLDTGKK4			3683.6
D3ZER2	D3ZER2	BFSP2_RAT	Bfsp2	Phakinin	1	LEAELAEIHSETEQQQQER	LEAELAEIHSETEQQQQER	3	LEAELAEIHSETEQQQQER3	5508.22		5772.96
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	LEAELEAVSR	LEAELEAVSR	2	LEAELEAVSR2	47306.6	38940.2	25162.2
A0A8I6A371	A0A8I6A371	A0A8I6A371_RAT	Nmi	N-myc (and STAT) interactor	1	LEAELQSNAR	LEAELQSNAR	2	LEAELQSNAR2	44821.8	40776.2	34475.2
Q01986	Q01986;P36506	MP2K1_RAT	Map2k1	Dual specificity mitogen-activated protein kinase kinase 1	0	LEAFLTQK	LEAFLTQK	2	LEAFLTQK2	13821.1	10704.9	9646.28
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LEAFNSR	LEAFNSR	2	LEAFNSR2	356626	366194	377781
P16975	P16975	SPRC_RAT	Sparc	SPARC	1	LEAGDHPVELLAR	LEAGDHPVELLAR	2	LEAGDHPVELLAR2	8453.05	9950.63	
P16975	P16975	SPRC_RAT	Sparc	SPARC	1	LEAGDHPVELLAR	LEAGDHPVELLAR	3	LEAGDHPVELLAR3	73064.4	62155.6	44428.8
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	LEAGDYAELVK	LEAGDYAELVK	2	LEAGDYAELVK2	126421	127204	123595
P63219	P63219;F2Z3T8	GBG5_RAT	Gng5	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5	0	LEAGLNR	LEAGLNR	2	LEAGLNR2	1.13306e+06	1.21081e+06	1.10697e+06
Q5XFW8	Q5XFW8	SEC13_RAT	Sec13	Protein SEC13 homolog	1	LEAHSDWVR	LEAHSDWVR	2	LEAHSDWVR2	19378.6	9166.01	11848.8
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	LEAIANSGLDHTHR	LEAIANSGLDHTHR	2	LEAIANSGLDHTHR2	8284.99	8498.14	6925.11
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	LEAIANSGLDHTHR	LEAIANSGLDHTHR	3	LEAIANSGLDHTHR3	264762	258064	211265
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	LEAIANSGLDHTHR	LEAIANSGLDHTHR	4	LEAIANSGLDHTHR4	146549	159296	165559
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	LEAIANSGLDHTHRK	LEAIANSGLDHTHRK	3	LEAIANSGLDHTHRK3	99684.7	156786	128214
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	LEAIANSGLDHTHRK	LEAIANSGLDHTHRK	4	LEAIANSGLDHTHRK4	43443.8	83251.6	61918.9
A0A8I5ZY29	A0A8I5ZY29	A0A8I5ZY29_RAT	Usp14	Ubiquitin carboxyl-terminal hydrolase	1	LEAIEDDSAR	LEAIEDDSAR	2	LEAIEDDSAR2	18447.7	12586.1	15339.3
A0A8I5ZY29	A0A8I5ZY29	A0A8I5ZY29_RAT	Usp14	Ubiquitin carboxyl-terminal hydrolase	1	LEAIEDDSARETESSSASAVTPSK	LEAIEDDSARETESSSASAVTPSK	3	LEAIEDDSARETESSSASAVTPSK3	3350.71	6767.64	5619.48
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	LEAISIMDSK	LEAISIMDSK	2	LEAISIMDSK2	37394.4	50640.8	63313.8
A0A0G2K4G0;A0A8I5YBI4	A0A8I5YBI4;A0A0G2K4G0	A0A0G2K4G0_RAT;A0A8I5YBI4_RAT	Rai1;Tcf20	Retinoic acid induced 1	0	LEAIVQK	LEAIVQK	1	LEAIVQK1	13879.6	13823	9458.94
A0A0G2K4G0;A0A8I5YBI4	A0A8I5YBI4;A0A0G2K4G0	A0A0G2K4G0_RAT;A0A8I5YBI4_RAT	Rai1;Tcf20	Retinoic acid induced 1	0	LEAIVQK	LEAIVQK	2	LEAIVQK2	57691.7	34505.7	69329.7
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	LEAKLDK	LEAKLDK	2	LEAKLDK2	3.13051e+06	2.09419e+06	2.95294e+06
P08081	P08081	CLCA_RAT	Clta	Clathrin light chain A	1	LEALDANSR	LEALDANSR	2	LEALDANSR2	1.27344e+06	1.17633e+06	1.2445e+06
P08081	P08081	CLCA_RAT	Clta	Clathrin light chain A	1	LEALDANSRK	LEALDANSRK	2	LEALDANSRK2	37436.4	42878.7	40982.2
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	LEALEQALCK	LEALEQALC(UniMod:4)K	2	LEALEQALC(UniMod:4)K2	3671.25	8587.41	9081.02
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	LEALFPDLPK	LEALFPDLPK	2	LEALFPDLPK2	394485	395061	378877
Q5BK07	Q5BK07	CCD43_RAT	Ccdc43	Coiled-coil domain-containing protein 43	1	LEALGVDQAVYR	LEALGVDQAVYR	2	LEALGVDQAVYR2	13874	21085.6	7534.74
B2RYI2	B2RYI2	B2RYI2_RAT	Srp68	Signal recognition particle subunit SRP68	1	LEALITQTR	LEALITQTR	2	LEALITQTR2	12357.6	17532.9	6683.98
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	LEALKDLASLSR	LEALKDLASLSR	3	LEALKDLASLSR3	4082.8	10908.6	13449.8
A0A8I6AAR9	A0A0G2K916;A0A8I6AAR9	A0A8I6AAR9_RAT	Ankrd17	Ankyrin repeat domain 17	0	LEALLEAAGIGK	LEALLEAAGIGK	2	LEALLEAAGIGK2	9009.97	16579.7	3551.29
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	LEALNSAHQLDQLR	LEALNSAHQLDQLR	3	LEALNSAHQLDQLR3	33408.3		41713.2
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	LEALQQAQEIDK	LEALQQAQEIDK	2	LEALQQAQEIDK2	4221.81	5388.66	5863.19
A0A8I5ZTU5	A0A8I5ZTU5;F7FNJ2;A0A8I6ATA7	A0A8I5ZTU5_RAT	Ranbp1	RAN binding protein 1	0	LEALSVR	LEALSVR	2	LEALSVR2	109932	116391	121055
B5DEH0	B5DEH0	LIMD1_RAT	Limd1	LIM domain-containing protein 1	1	LEALTQR	LEALTQR	2	LEALTQR2	33707	33465.9	30346.5
A0A8I6A8I7	A0A8I6A8I7	A0A8I6A8I7_RAT	Eif1ax	Eukaryotic translation initiation factor 4C	1	LEAMCFDGVK	LEAMC(UniMod:4)FDGVK	2	LEAMC(UniMod:4)FDGVK2	123229	127454	131684
A0A8I6A8I7	A0A8I6A8I7	A0A8I6A8I7_RAT	Eif1ax	Eukaryotic translation initiation factor 4C	1	LEAMCFDGVKR	LEAMC(UniMod:4)FDGVKR	3	LEAMC(UniMod:4)FDGVKR3	35021.6	45110.9	41385.2
Q6VV72	Q6VV72	IF1A_RAT	Eif1a	Eukaryotic translation initiation factor 1A	1	LEAMCFDGVR	LEAMC(UniMod:4)FDGVR	2	LEAMC(UniMod:4)FDGVR2	95700.1	93996.1	84350.6
Q6VV72	Q6VV72	IF1A_RAT	Eif1a	Eukaryotic translation initiation factor 1A	1	LEAMCFDGVRR	LEAMC(UniMod:4)FDGVRR	3	LEAMC(UniMod:4)FDGVRR3	27239.8	32568.4	24880
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	LEAMTNSK	LEAMTNSK	1	LEAMTNSK1	13160.1	15540.1	17344
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	LEAMTNSK	LEAMTNSK	2	LEAMTNSK2	2.13093e+06	1.24947e+06	2.02201e+06
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	LEANNLEVK	LEANNLEVK	2	LEANNLEVK2	21725.6	19753.1	24157.5
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	LEAPDADELPR	LEAPDADELPR	2	LEAPDADELPR2	374162	316850	327916
G3V8G2	G3V8G2	G3V8G2_RAT	Psmd5	26S proteasome non-ATPase regulatory subunit 5	1	LEAPLEELR	LEAPLEELR	2	LEAPLEELR2	67360.4	46708.1	62878.2
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	LEAQETLNK	LEAQETLNK	2	LEAQETLNK2	108108	108033	98402.3
Q6MGC4	Q6MGC4	Q6MGC4_RAT	Pfdn6	Prefoldin subunit 6	1	LEAQLTENNIVK	LEAQLTENNIVK	2	LEAQLTENNIVK2	34571.4	24822.5	25305.5
Q6MGC4	Q6MGC4	Q6MGC4_RAT	Pfdn6	Prefoldin subunit 6	1	LEAQLTENNIVKEELALLDGSNVVFK	LEAQLTENNIVKEELALLDGSNVVFK	3	LEAQLTENNIVKEELALLDGSNVVFK3	10788.4	4384.93	964.928
A0A8I5ZTW6	A0A8I5ZTW6	A0A8I5ZTW6_RAT	Gopc	Golgi associated PDZ and coiled-coil motif containing	1	LEAQLVDLR	LEAQLVDLR	2	LEAQLVDLR2	29325.8	27178.8	31833.4
Q05096	Q05096	MYO1B_RAT	Myo1b	Unconventional myosin-Ib	1	LEASELFK	LEASELFK	2	LEASELFK2	12694.4	12930.4	13351.9
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	LEASIENLR	LEASIENLR	2	LEASIENLR2	43894.1	28617.6	35565.1
G3V6P8	G3V6P8	G3V6P8_RAT	Gng12	Guanine nucleotide-binding protein subunit gamma	1	LEASIER	LEASIER	2	LEASIER2	460013	496091	517730
Q5XIN4	Q5XIN4	Q5XIN4_RAT	Mtmr9	Myotubularin related protein 9	1	LEASNWLTHIK	LEASNWLTHIK	3	LEASNWLTHIK3	9332.79	6401.82	7613.52
P11232	P11232	THIO_RAT	Txn	Thioredoxin	1	LEATITEFA	LEATITEFA	2	LEATITEFA2	16670.9	23409.3	11153.8
Q9EPB1	Q9EPB1	DPP2_RAT	Dpp7	Dipeptidyl peptidase 2	1	LEATLIR	LEATLIR	2	LEATLIR2	40076.8	37627.4	38396.9
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	LEATLQEEAAIQQEHLEELK	LEATLQEEAAIQQEHLEELK	3	LEATLQEEAAIQQEHLEELK3	25454.3	19585	26319.4
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	LEATLQEEAAIQQEHLEELKR	LEATLQEEAAIQQEHLEELKR	4	LEATLQEEAAIQQEHLEELKR4		7568.97	8521.59
Q6AYD4	Q6AYD4	ESAM_RAT	Esam	Endothelial cell-selective adhesion molecule	1	LEAVEGEEVVLPAWYTMAR	LEAVEGEEVVLPAWYTMAR	3	LEAVEGEEVVLPAWYTMAR3	28306.1	27954.7	20968.2
D3ZDR7	D3ZDR7	D3ZDR7_RAT	Themis2	Thymocyte selection associated family member 2	1	LEAVEVHHGTR	LEAVEVHHGTR	3	LEAVEVHHGTR3	6992.02		
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	LEAVFVAPEK	LEAVFVAPEK	2	LEAVFVAPEK2	82318.6	68644	71040.3
Q03070	Q03070	CHIO_RAT	Chn2	Beta-chimaerin	1	LEAVHEVLMLLPPAHYETLR	LEAVHEVLMLLPPAHYETLR	4	LEAVHEVLMLLPPAHYETLR4	2707.57	3632.71	3508.61
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	LEAVPSEEALVSR	LEAVPSEEALVSR	2	LEAVPSEEALVSR2	35607.9	24590.2	25710.2
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	LEAVSHTSDMHCGYGDSPSK	LEAVSHTSDMHC(UniMod:4)GYGDSPSK	3	LEAVSHTSDMHC(UniMod:4)GYGDSPSK3	218344	181288	212971
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	LEAVSHTSDMHCGYGDSPSK	LEAVSHTSDMHC(UniMod:4)GYGDSPSK	4	LEAVSHTSDMHC(UniMod:4)GYGDSPSK4	131609	152797	140644
P29410	P29410	KAD2_RAT	Ak2	Adenylate kinase 2, mitochondrial	1	LEAYHTQTTPLVEYYR	LEAYHTQTTPLVEYYR	3	LEAYHTQTTPLVEYYR3	163703	129237	143595
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	LEAYQHLFYLLQTNPTYLAK	LEAYQHLFYLLQTNPTYLAK	3	LEAYQHLFYLLQTNPTYLAK3	17857	52110	27145.1
A0A8I5Y4X4	A0A8I5Y4X4	A0A8I5Y4X4_RAT	Nub1	Negative regulator of ubiquitin-like proteins 1	1	LECCENEVENIIEEIR	LEC(UniMod:4)C(UniMod:4)ENEVENIIEEIR	3	LEC(UniMod:4)C(UniMod:4)ENEVENIIEEIR3	7306.41	7247.65	11106.2
P27590	P27590	UROM_RAT	Umod	Uromodulin	1	LECEANEIK	LEC(UniMod:4)EANEIK	2	LEC(UniMod:4)EANEIK2	8183.47	12787.3	12731.9
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	LECEDELTGAEISCLR	LEC(UniMod:4)EDELTGAEISC(UniMod:4)LR	2	LEC(UniMod:4)EDELTGAEISC(UniMod:4)LR2	56848.5	48842.9	50914.3
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	LECEDELTGAEISCLR	LEC(UniMod:4)EDELTGAEISC(UniMod:4)LR	3	LEC(UniMod:4)EDELTGAEISC(UniMod:4)LR3	14374.5	23191.2	11013.1
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	LECELESEDADK	LEC(UniMod:4)ELESEDADK	2	LEC(UniMod:4)ELESEDADK2	5497.9	8956.22	11161.1
B2RZ68	B2RZ68	B2RZ68_RAT	Dcaf7	DDB1 and CUL4 associated factor 7	1	LECLLNNNK	LEC(UniMod:4)LLNNNK	2	LEC(UniMod:4)LLNNNK2	21194.9	16817.7	20072.8
Q4V8I7	Q4V8I7	LRC8A_RAT	Lrrc8a	Volume-regulated anion channel subunit LRRC8A	1	LECLPVELGECPLLK	LEC(UniMod:4)LPVELGEC(UniMod:4)PLLK	2	LEC(UniMod:4)LPVELGEC(UniMod:4)PLLK2	16679.3	16274	14077.2
B2RZ87	B2RZ87	MADL2_RAT	Myadml2	Myeloid-associated differentiation marker-like protein 2	1	LECPPEPAGCMVR	LEC(UniMod:4)PPEPAGC(UniMod:4)MVR	2	LEC(UniMod:4)PPEPAGC(UniMod:4)MVR2	10580.2		
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	LECQPVDCGVPEPIENGK	LEC(UniMod:4)QPVDC(UniMod:4)GVPEPIENGK	3	LEC(UniMod:4)QPVDC(UniMod:4)GVPEPIENGK3	2.3484e+06	2.66687e+06	2.80338e+06
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	LECSEELGDLVK	LEC(UniMod:4)SEELGDLVK	2	LEC(UniMod:4)SEELGDLVK2	425340	526619	474891
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	LECSEELGDLVK	LEC(UniMod:4)SEELGDLVK	3	LEC(UniMod:4)SEELGDLVK3	9496.39	12345.3	9870.01
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	LECTLPDGTGR	LEC(UniMod:4)TLPDGTGR	2	LEC(UniMod:4)TLPDGTGR2	29900.7	36654.4	38167.1
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LECTNLYR	LEC(UniMod:4)TNLYR	2	LEC(UniMod:4)TNLYR2	43354.2	52615.6	54419.3
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	LECVDNDECADEEPACEGGR	LEC(UniMod:4)VDNDEC(UniMod:4)ADEEPAC(UniMod:4)EGGR	3	LEC(UniMod:4)VDNDEC(UniMod:4)ADEEPAC(UniMod:4)EGGR3	84937.3	75639.2	93012.8
P83883	P83883;M0R7E5;A0A8I6A205	RL36A_RAT	Rpl36a	Large ribosomal subunit protein eL42	0	LECVEPNCR	LEC(UniMod:4)VEPNC(UniMod:4)R	2	LEC(UniMod:4)VEPNC(UniMod:4)R2	25029.8	26570.8	13473.2
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	LECWIDPLSMGPQK	LEC(UniMod:4)WIDPLSMGPQK	2	LEC(UniMod:4)WIDPLSMGPQK2	9725.84	18736.7	
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	LEDAADVYR	LEDAADVYR	2	LEDAADVYR2	53382.8	64601.6	48056.8
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	LEDAEAR	LEDAEAR	2	LEDAEAR2	268341		173971
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	LEDAEATLLANSAK	LEDAEATLLANSAK	2	LEDAEATLLANSAK2	39843.4	33289.8	25528.5
A0A0G2K435	A0A0G2K435	A0A0G2K435_RAT	Dnajc7	DnaJ heat shock protein family (Hsp40) member C7	1	LEDAIEDCTNAVK	LEDAIEDC(UniMod:4)TNAVK	2	LEDAIEDC(UniMod:4)TNAVK2	5278.37	2986.92	4350.47
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	LEDASILCLDK	LEDASILC(UniMod:4)LDK	2	LEDASILC(UniMod:4)LDK2	3941.4	6612.68	
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	LEDAVAEASK	LEDAVAEASK	2	LEDAVAEASK2	41356.6	55505	86129.4
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	LEDCALQVSPSGYYLDPELSLEEQR	LEDC(UniMod:4)ALQVSPSGYYLDPELSLEEQR	3	LEDC(UniMod:4)ALQVSPSGYYLDPELSLEEQR3	14474.1	21987.3	21922.2
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LEDDAKDNQQK	LEDDAKDNQQK	2	LEDDAKDNQQK2			1749.77
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LEDDAKDNQQK	LEDDAKDNQQK	3	LEDDAKDNQQK3			4303.29
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	LEDDTSGSFFK	LEDDTSGSFFK	2	LEDDTSGSFFK2	9652.31	4755.63	3838.37
Q29RW1	A0A0G2JY53;P02563;P02564;P12847;Q29RW1	MYH4_RAT	Myh4	Myosin-4	0	LEDECSELK	LEDEC(UniMod:4)SELK	2	LEDEC(UniMod:4)SELK2	15921.3	15155.7	11870.7
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	LEDEILLLEK	LEDEILLLEK	2	LEDEILLLEK2	6144.71	5903.48	4782.78
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	LEDELGGR	LEDELGGR	2	LEDELGGR2	81708.6		
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	LEDELNR	LEDELNR	2	LEDELNR2	89424	90959	75787.7
F1LWX6	F1LWX6	F1LWX6_RAT	Poln	DNA polymerase nu	1	LEDEVQTLQK	LEDEVQTLQK	2	LEDEVQTLQK2	3436.04		
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	LEDFDQIFWGQK	LEDFDQIFWGQK	2	LEDFDQIFWGQK2	219031	192069	192700
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	LEDFDQIFWGQK	LEDFDQIFWGQK	3	LEDFDQIFWGQK3	32512.9	18318.1	29768.7
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	LEDFPIHAITGVLK	LEDFPIHAITGVLK	2	LEDFPIHAITGVLK2	4378.33	5560.5	
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	LEDFPIHAITGVLK	LEDFPIHAITGVLK	3	LEDFPIHAITGVLK3	49265.1	65889.8	47466.5
Q9Z1P2	Q9QXQ0;Q8R4I6;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	LEDFRDYR	LEDFRDYR	2	LEDFRDYR2	119496	150760	175572
Q9Z1P2	Q9QXQ0;Q8R4I6;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	LEDFRDYRR	LEDFRDYRR	3	LEDFRDYRR3	21794.6	26757.6	34585
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	LEDFTGR	LEDFTGR	2	LEDFTGR2	79130	98906.7	82659.5
Q02769	Q02769	FDFT_RAT	Fdft1	Squalene synthase	1	LEDFVKPENVDVAVK	LEDFVKPENVDVAVK	3	LEDFVKPENVDVAVK3	2426.54	4326.98	4140.83
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	LEDGDMEEAAAAAAAGGR	LEDGDMEEAAAAAAAGGR	2	LEDGDMEEAAAAAAAGGR2	128076	145544	135869
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	LEDGDMEEAAAAAAAGGR	LEDGDMEEAAAAAAAGGR	3	LEDGDMEEAAAAAAAGGR3	46537	62369.7	65122.9
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	LEDGYFGGAR	LEDGYFGGAR	2	LEDGYFGGAR2	11127.7	9575.44	6937.98
Q62991	Q62991	SCFD1_RAT	Scfd1	Sec1 family domain-containing protein 1	1	LEDIANAALAANAVTQVAK	LEDIANAALAANAVTQVAK	2	LEDIANAALAANAVTQVAK2	20479.7	20274.8	22174
Q6AXN3	Q6AXN3	TMED5_RAT	Tmed5	Transmembrane emp24 domain-containing protein 5	1	LEDILESINSIK	LEDILESINSIK	2	LEDILESINSIK2	90624.5	76321.2	89230.6
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	LEDILSR	LEDILSR	2	LEDILSR2	60058.4	61546.8	51425.1
Q05096	Q05096	MYO1B_RAT	Myo1b	Unconventional myosin-Ib	1	LEDLATLIQK	LEDLATLIQK	2	LEDLATLIQK2	6298.13	5324.61	3239.85
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LEDLEVIQHR	LEDLEVIQHR	2	LEDLEVIQHR2	87538.8	68658.4	88693.9
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LEDLEVIQHR	LEDLEVIQHR	3	LEDLEVIQHR3	852729	1.00956e+06	916124
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	LEDLGDLR	LEDLGDLR	2	LEDLGDLR2	12223.7	2966.29	11853.4
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	LEDLGDQR	LEDLGDQR	2	LEDLGDQR2	33828	34844	39053.5
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	LEDLIVK	LEDLIVK	1	LEDLIVK1	5546.82	6828.75	4132.03
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	LEDLIVK	LEDLIVK	2	LEDLIVK2	855603	838884	820320
P30427	P30427	PLEC_RAT	Plec	Plectin	1	LEDLLQDAQDEK	LEDLLQDAQDEK	2	LEDLLQDAQDEK2	2832.31	4492.53	6927.11
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LEDLLQDSMDEK	LEDLLQDSMDEK	2	LEDLLQDSMDEK2	8547.3	10779.1	12939.7
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LEDLLQDSMDEKEQLIQSK	LEDLLQDSMDEKEQLIQSK	3	LEDLLQDSMDEKEQLIQSK3	24262.3	22074.1	16000.9
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	LEDLQHMCLELTVWDREPLASNDFLGGVR	LEDLQHMC(UniMod:4)LELTVWDREPLASNDFLGGVR	4	LEDLQHMC(UniMod:4)LELTVWDREPLASNDFLGGVR4	26878.6	24832.8	34853.8
Q63584	Q63584	TMEDA_RAT	Tmed10	Transmembrane emp24 domain-containing protein 10	1	LEDLSESIVNDFAYMK	LEDLSESIVNDFAYMK	2	LEDLSESIVNDFAYMK2	37451.6	62927.6	73211.8
Q63584	Q63584	TMEDA_RAT	Tmed10	Transmembrane emp24 domain-containing protein 10	1	LEDLSESIVNDFAYMK	LEDLSESIVNDFAYMK	3	LEDLSESIVNDFAYMK3	10394.5	7770.98	19287.2
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	LEDLTLR	LEDLTLR	2	LEDLTLR2	1.28343e+06	1.34075e+06	1.16697e+06
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	LEDLTLRDLEK	LEDLTLRDLEK	2	LEDLTLRDLEK2	9788.71	7263.13	9314.2
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	LEDLTLRDLEK	LEDLTLRDLEK	3	LEDLTLRDLEK3	24236.8	36002.5	45598.2
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	LEDLTTPYVR	LEDLTTPYVR	2	LEDLTTPYVR2	105084	64879.5	118939
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	LEDLTTPYVR	LEDLTTPYVR	3	LEDLTTPYVR3	4130.14	5248.4	
D3ZTX0	D3ZTX0	TMED7_RAT	Tmed7	Transmembrane emp24 domain-containing protein 7	1	LEDPDGK	LEDPDGK	1	LEDPDGK1	19150.9	9932.15	14961.7
D3ZTX0	D3ZTX0	TMED7_RAT	Tmed7	Transmembrane emp24 domain-containing protein 7	1	LEDPDGK	LEDPDGK	2	LEDPDGK2	354983	312887	336230
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	LEDPDPGVQSAAVNVICELAR	LEDPDPGVQSAAVNVIC(UniMod:4)ELAR	3	LEDPDPGVQSAAVNVIC(UniMod:4)ELAR3	46760.2	58174.3	48471.8
Q5XIP9	Q5XIP9	TMM43_RAT	Tmem43	Transmembrane protein 43	1	LEDPHVDIIR	LEDPHVDIIR	2	LEDPHVDIIR2	9405.55		5494.82
Q5XIP9	Q5XIP9	TMM43_RAT	Tmem43	Transmembrane protein 43	1	LEDPHVDIIR	LEDPHVDIIR	3	LEDPHVDIIR3	242734	235979	252012
P07808	P07808	NPY_RAT	Npy	Pro-neuropeptide Y	1	LEDPSMW	LEDPSMW	1	LEDPSMW1	25630.4	15379.1	23250.1
F1LRE5	F1LRE5	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	1	LEDQNEYESR	LEDQNEYESR	2	LEDQNEYESR2	18044.5	24913	16271.8
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LEDSSNQVTQAVAK	LEDSSNQVTQAVAK	2	LEDSSNQVTQAVAK2	74976.9	86244.2	81620.7
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LEDSSNQVTQAVAK	LEDSSNQVTQAVAK	3	LEDSSNQVTQAVAK3	25740.4	30179.7	26370.8
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	LEDTENWLYEDGEDQPK	LEDTENWLYEDGEDQPK	3	LEDTENWLYEDGEDQPK3	62093.3	77798	84963.2
O70467	O70467	ANM3_RAT	Prmt3	Protein arginine N-methyltransferase 3	1	LEDTIVLIK	LEDTIVLIK	2	LEDTIVLIK2	10788.4	13215.7	8778.75
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	LEDTLWAGLTDQHVK	LEDTLWAGLTDQHVK	2	LEDTLWAGLTDQHVK2	18096.5	15527.2	20632
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	LEDTLWAGLTDQHVK	LEDTLWAGLTDQHVK	3	LEDTLWAGLTDQHVK3	88209.7	77513.1	72528.5
A0A8I5ZUI2	A0A8I5ZUI2	A0A8I5ZUI2_RAT	Ano10	Anoctamin	1	LEDTWYTR	LEDTWYTR	2	LEDTWYTR2	19618.8	16136.8	23361.3
P17425	P17425	HMCS1_RAT	Hmgcs1	Hydroxymethylglutaryl-CoA synthase, cytoplasmic	1	LEDTYFDRDVEK	LEDTYFDRDVEK	3	LEDTYFDRDVEK3	31343.3	34228.5	19477.2
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	LEDVALVVEAK	LEDVALVVEAK	2	LEDVALVVEAK2	82982.8	105651	89389.5
D3ZIT4	D3ZIT4	D3ZIT4_RAT	Anapc7	Anaphase promoting complex subunit 7	1	LEDVENLGCR	LEDVENLGC(UniMod:4)R	2	LEDVENLGC(UniMod:4)R2	14300.7	8389.34	9396.91
P55146	P55146	TYRO3_RAT	Tyro3	Tyrosine-protein kinase receptor TYRO3	1	LEDVLIPEQQFTLGR	LEDVLIPEQQFTLGR	2	LEDVLIPEQQFTLGR2	11450.7		13940.7
E9PU15	E9PU15	E9PU15_RAT	Dicer1	Endoribonuclease Dicer	1	LEDYQDAVIIPR	LEDYQDAVIIPR	2	LEDYQDAVIIPR2	2591.35	4800.96	
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	LEEAAAPGAR	LEEAAAPGAR	2	LEEAAAPGAR2	14891.4	10189	11294
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	LEEAALR	LEEAALR	2	LEEAALR2	55354.5	44993.4	49703.6
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	LEEADQLYR	LEEADQLYR	2	LEEADQLYR2	23538.7	20108.7	25740.6
Q63610	Q63610;P58775;P09495;P04692	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	0	LEEAEKAADESER	LEEAEKAADESER	3	LEEAEKAADESER3	15733.2	14630	19490.9
Q63610	Q63610;P58775;P09495;P04692	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	0	LEEAEKAADESERGMK	LEEAEKAADESERGMK	4	LEEAEKAADESERGMK4		9554.37	9240.87
F7EXP7	F7EXP7	F7EXP7_RAT	Snx7	Sorting nexin 7	1	LEEAHPTLIIPPLPEK	LEEAHPTLIIPPLPEK	3	LEEAHPTLIIPPLPEK3	17506.9	18235	17328.9
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	LEEAILGSIGAR	LEEAILGSIGAR	2	LEEAILGSIGAR2	76143.5	83642.8	84915.2
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	LEEALLR	LEEALLR	2	LEEALLR2	176800	175746	173274
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	LEEANNALTK	LEEANNALTK	2	LEEANNALTK2	36467.2	28500.8	42114.4
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	LEEAPLVTK	LEEAPLVTK	2	LEEAPLVTK2	7274.89	4501.47	6396.38
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	LEEAREPSPR	LEEAREPSPR	3	LEEAREPSPR3			19591.1
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	LEEAYEK	LEEAYEK	2	LEEAYEK2	13122.6	4958	6976.32
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LEECEQR	LEEC(UniMod:4)EQR	2	LEEC(UniMod:4)EQR2			12475.8
D4ACA1	D4ACA1	D4ACA1_RAT	Nxpe3	Neurexophilin and PC-esterase domain family, member 3	1	LEEDALLAASK	LEEDALLAASK	2	LEEDALLAASK2	4116.46	3365.99	
Q3B7D0	Q3B7D0	HEM6_RAT	Cpox	Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial	1	LEEDGDELAR	LEEDGDELAR	2	LEEDGDELAR2		2464.69	
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	LEEDGGCVIGGDR	LEEDGGC(UniMod:4)VIGGDR	2	LEEDGGC(UniMod:4)VIGGDR2	7882.81	10518.3	3791.89
A0A8I6AH91	A0A8I6AH91	A0A8I6AH91_RAT	Pcbp1	Poly(rC) binding protein 1	1	LEEDINSSMTNSTAASRPPVTLR	LEEDINSSMTNSTAASRPPVTLR	3	LEEDINSSMTNSTAASRPPVTLR3	65593.5	51405.4	61267.1
Q6AYU2	Q6AYU2	Q6AYU2_RAT	Pcbp2	Poly(rC) binding protein 2	1	LEEDISSSMTNSTAASRPPVTLR	LEEDISSSMTNSTAASRPPVTLR	3	LEEDISSSMTNSTAASRPPVTLR3	63745.8	48052.6	50839.4
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	LEEDQEDMNELMK	LEEDQEDMNELMK	2	LEEDQEDMNELMK2	4756.91	1662.18	1980.7
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LEEDQIIMEDQNCK	LEEDQIIMEDQNC(UniMod:4)K	2	LEEDQIIMEDQNC(UniMod:4)K2	20331.1	19863.3	9.53632e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LEEDQIIMEDQNCK	LEEDQIIMEDQNC(UniMod:4)K	3	LEEDQIIMEDQNC(UniMod:4)K3	2.50593e+06	2.83365e+06	2.79461e+06
Q9Z136	Q9Z136	TSC1_RAT	Tsc1	Hamartin	1	LEEDRAEAAEAAEER	LEEDRAEAAEAAEER	3	LEEDRAEAAEAAEER3	4845.11	5684.35	1544.16
Q769K2	Q769K2	NAPEP_RAT	Napepld	N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D	1	LEEDVTK	LEEDVTK	2	LEEDVTK2	79914.1	76442.9	87445.5
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	LEEDYPQFSSPK	LEEDYPQFSSPK	2	LEEDYPQFSSPK2	183113	188770	204034
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	LEEEDEDDEDGER	LEEEDEDDEDGER	2	LEEEDEDDEDGER2		6818.84	147331
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	LEEEDEDDEDGERGCTFLVGLIQK	LEEEDEDDEDGERGC(UniMod:4)TFLVGLIQK	3	LEEEDEDDEDGERGC(UniMod:4)TFLVGLIQK3	211222	229114	264326
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	LEEEDEDDEDGERGCTFLVGLIQK	LEEEDEDDEDGERGC(UniMod:4)TFLVGLIQK	4	LEEEDEDDEDGERGC(UniMod:4)TFLVGLIQK4	30347.3	36449.2	23949.7
Q63616	Q63616	VP33B_RAT	Vps33b	Vacuolar protein sorting-associated protein 33B	1	LEEEEDSETK	LEEEEDSETK	2	LEEEEDSETK2	8846.08		
P11915	P11915	SCP2_RAT	Scp2	Sterol carrier protein 2	1	LEEEGEEFVK	LEEEGEEFVK	2	LEEEGEEFVK2	11414		14564
P11915	P11915	SCP2_RAT	Scp2	Sterol carrier protein 2	1	LEEEGEEFVKK	LEEEGEEFVKK	2	LEEEGEEFVKK2	5862.3	5206.81	6222.69
P11915	P11915	SCP2_RAT	Scp2	Sterol carrier protein 2	1	LEEEGEEFVKK	LEEEGEEFVKK	3	LEEEGEEFVKK3	36613.8	25212.7	32256.2
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	LEEELAK	LEEELAK	2	LEEELAK2	14803.4	19901	22500.2
Q4QQS8	Q4QQS8	NUP85_RAT	Nup85	Nuclear pore complex protein Nup85	1	LEEELSGK	LEEELSGK	2	LEEELSGK2	1.05707e+06	1.01088e+06	970455
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	LEEESAQLK	LEEESAQLK	2	LEEESAQLK2	30308.4	19983.3	67691.8
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	LEEESFR	LEEESFR	2	LEEESFR2	930606	1.00097e+06	1.03235e+06
D4A0J7	D4A0J7;D3ZHK4	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	0	LEEEVSK	LEEEVSK	1	LEEEVSK1	1003.72	1328.89	2233.37
D4A0J7	D4A0J7;D3ZHK4	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	0	LEEEVSK	LEEEVSK	2	LEEEVSK2	157563	156563	175636
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	LEEFEGER	LEEFEGER	2	LEEFEGER2	2824.46		
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	LEEFEGEREQLQK	LEEFEGEREQLQK	3	LEEFEGEREQLQK3	21766.3	17903.2	
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	LEEFFAR	LEEFFAR	2	LEEFFAR2	197704	159491	165767
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	LEEFVQGNLER	LEEFVQGNLER	2	LEEFVQGNLER2	59769.9	45446.5	64908.7
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	LEEGESSSLR	LEEGESSSLR	2	LEEGESSSLR2	19315.2	12234.1	12211.2
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	LEEGESSSLRK	LEEGESSSLRK	3	LEEGESSSLRK3		21241.5	
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	LEEGGPVYSPPAQVVVK	LEEGGPVYSPPAQVVVK	2	LEEGGPVYSPPAQVVVK2	76778.3	76023.4	84827.6
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	LEEGGPVYSPPAQVVVK	LEEGGPVYSPPAQVVVK	3	LEEGGPVYSPPAQVVVK3	8226.62	10011.5	19195.9
Q63632	Q63633;G3V6N7;Q63632	S12A4_RAT	Slc12a4	Solute carrier family 12 member 4	0	LEEGPPHTK	LEEGPPHTK	2	LEEGPPHTK2	6204.63	4593.55	
D4A5G8	D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	LEEGPPVTTVLTR	LEEGPPVTTVLTR	2	LEEGPPVTTVLTR2	71137.5	49387	62947.3
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	LEEHAVEALWK	LEEHAVEALWK	3	LEEHAVEALWK3	1348.49	3153.72	
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	LEEHEEALLGR	LEEHEEALLGR	3	LEEHEEALLGR3	18094.4	14797.4	14741.9
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	LEEHLGR	LEEHLGR	2	LEEHLGR2	70305.9	57041.8	61676.2
Q66H39	Q66H39	ABCF3_RAT	Abcf3	ATP-binding cassette sub-family F member 3	1	LEEIEADKAPAR	LEEIEADKAPAR	3	LEEIEADKAPAR3		5434.04	
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	LEEIPLIK	LEEIPLIK	2	LEEIPLIK2	21381.2	11964.5	18148.6
O35433	O35433	TRPV1_RAT	Trpv1	Transient receptor potential cation channel subfamily V member 1	1	LEEITNR	LEEITNR	2	LEEITNR2	148896	146623	156148
P36506	P36506	MP2K2_RAT	Map2k2	Dual specificity mitogen-activated protein kinase kinase 2	1	LEELDLDEQQR	LEELDLDEQQR	2	LEELDLDEQQR2	8173.61	3709.63	4650.4
P36506	P36506	MP2K2_RAT	Map2k2	Dual specificity mitogen-activated protein kinase kinase 2	1	LEELDLDEQQRK	LEELDLDEQQRK	3	LEELDLDEQQRK3	33655	14496.4	11535.1
Q01986	Q01986	MP2K1_RAT	Map2k1	Dual specificity mitogen-activated protein kinase kinase 1	1	LEELELDEQQR	LEELELDEQQR	2	LEELELDEQQR2	38868.2	32156.3	34297.3
Q01986	Q01986	MP2K1_RAT	Map2k1	Dual specificity mitogen-activated protein kinase kinase 1	1	LEELELDEQQRK	LEELELDEQQRK	2	LEELELDEQQRK2	2682.3		3075.86
Q01986	Q01986	MP2K1_RAT	Map2k1	Dual specificity mitogen-activated protein kinase kinase 1	1	LEELELDEQQRK	LEELELDEQQRK	3	LEELELDEQQRK3	49254.5	49899.2	42317.5
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	LEELEMLVSSLR	LEELEMLVSSLR	3	LEELEMLVSSLR3	38794.4	55270.3	48511.8
D4A234	D4A234	D4A234_RAT	Uri1	URI1, prefoldin-like chaperone	1	LEELERQEELLGELK	LEELERQEELLGELK	3	LEELERQEELLGELK3	4264.75	5787.01	
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	LEELGDQR	LEELGDQR	2	LEELGDQR2	66190.7	69812.2	68533
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	LEELGQEK	LEELGQEK	2	LEELGQEK2	12046.9	4947.5	9398.4
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	LEELHVIDVK	LEELHVIDVK	2	LEELHVIDVK2	9915.96	10733.5	9370.65
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	LEELHVIDVK	LEELHVIDVK	3	LEELHVIDVK3	32750.4	35434	38633.5
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	LEELLLGAAR	LEELLLGAAR	2	LEELLLGAAR2	11943.7	12912.6	16145.6
Q5QJC9	Q5QJC9	BAG5_RAT	Bag5	BAG family molecular chaperone regulator 5	1	LEELLTK	LEELLTK	2	LEELLTK2	13974.9	9989.95	11345.9
Q6AXQ4	Q6AXQ4	MTM1_RAT	Mtm1	Myotubularin	1	LEELQLATPTK	LEELQLATPTK	2	LEELQLATPTK2	4043.23	6468.22	7288.94
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	LEELQQK	LEELQQK	2	LEELQQK2	39661.1	40060.6	40584.6
D4AEK9	D4AEK9	D4AEK9_RAT	Ccdc6	Coiled-coil domain containing 6	1	LEELTNR	LEELTNR	2	LEELTNR2	148896	146623	156148
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	LEELVHFLQVMYPK	LEELVHFLQVMYPK	3	LEELVHFLQVMYPK3	16364.9	14825	3792.23
Q5U2P0	Q5U2P0	DI3L1_RAT	Dis3l	DIS3-like exonuclease 1	1	LEELVWAIGK	LEELVWAIGK	2	LEELVWAIGK2	1624.55	3492.53	3078.05
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	LEELYTK	LEELYTK	2	LEELYTK2	120779	96796.6	107118
B3GNI6	A0A8I6AA08;B3GNI6	SEP11_RAT	Septin11	Septin-11	0	LEEMGFK	LEEMGFK	2	LEEMGFK2	145247	102933	110374
B3GNI6	A0A8I6AA08;B3GNI6	SEP11_RAT	Septin11	Septin-11	0	LEEMGFKDTDPDSK	LEEMGFKDTDPDSK	3	LEEMGFKDTDPDSK3	20716.4	12264.7	16346
B3GNI6	A0A8I6AA08;B3GNI6	SEP11_RAT	Septin11	Septin-11	0	LEEMGFKDTDPDSKPFSLQETYEAK	LEEMGFKDTDPDSKPFSLQETYEAK	3	LEEMGFKDTDPDSKPFSLQETYEAK3	11663.5	11304.9	7009.52
B3GNI6	A0A8I6AA08;B3GNI6	SEP11_RAT	Septin11	Septin-11	0	LEEMGFKDTDPDSKPFSLQETYEAK	LEEMGFKDTDPDSKPFSLQETYEAK	4	LEEMGFKDTDPDSKPFSLQETYEAK4	17852.6	17893.7	18665.1
Q63524	Q63524	TMED2_RAT	Tmed2	Transmembrane emp24 domain-containing protein 2	1	LEEMINELAVAMTAVK	LEEMINELAVAMTAVK	2	LEEMINELAVAMTAVK2	125993	164679	171458
Q63524	Q63524	TMED2_RAT	Tmed2	Transmembrane emp24 domain-containing protein 2	1	LEEMINELAVAMTAVK	LEEMINELAVAMTAVK	3	LEEMINELAVAMTAVK3	60828	50678.5	80523.5
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	LEEMKPLNK	LEEMKPLNK	2	LEEMKPLNK2	9365.34	7148.71	5734.64
F1LXS3	F1LXS3	F1LXS3_RAT	Matn2	Matrilin 2	1	LEEMTQR	LEEMTQR	2	LEEMTQR2	12847.6	15547.4	15381.9
Q6IRE4	Q6IRE4	TS101_RAT	Tsg101	Tumor susceptibility gene 101 protein	1	LEEMVTR	LEEMVTR	2	LEEMVTR2	171996	155429	149014
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	LEEMYEER	LEEMYEER	2	LEEMYEER2		4674.22	4633.27
A0A8I6A3Z5	A0A8I6A3Z5	A0A8I6A3Z5_RAT	Uba2	SUMO-activating enzyme subunit 2	1	LEENEGASTK	LEENEGASTK	2	LEENEGASTK2			6830.08
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	LEENHELFSK	LEENHELFSK	3	LEENHELFSK3	74551.3	81397.8	51087.1
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	LEENVHYFGR	LEENVHYFGR	2	LEENVHYFGR2	5042.48	4029.72	
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	LEENVHYFGR	LEENVHYFGR	3	LEENVHYFGR3	50777.3	54078.5	48236.8
A0A8I6A6H8	A0A8I6A6H8	A0A8I6A6H8_RAT	Serpinb6a	Serpin family B member 6A	1	LEENYDMK	LEENYDMK	2	LEENYDMK2	374526	360938	403781
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	LEEPCQVETGHCQR	LEEPC(UniMod:4)QVETGHC(UniMod:4)QR	3	LEEPC(UniMod:4)QVETGHC(UniMod:4)QR3	21875.3	18544	29684.6
A0JPM9	A0JPM9	EIF3J_RAT	Eif3j	Eukaryotic translation initiation factor 3 subunit J	1	LEEPEESK	LEEPEESK	2	LEEPEESK2	30959.6	28891.6	37712.3
P01026	P01026	CO3_RAT	C3	Complement C3	1	LEEPYLTK	LEEPYLTK	2	LEEPYLTK2	6.82873e+06	7.45722e+06	6.8977e+06
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	LEEQDEFEK	LEEQDEFEK	2	LEEQDEFEK2	414817	403246	415526
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	LEEQLHNEMQLK	LEEQLHNEMQLK	3	LEEQLHNEMQLK3	12899.1	23048.1	11873.4
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	LEEQLKEK	LEEQLKEK	2	LEEQLKEK2	3328.57	6420.71	3690.3
D3ZE26	D3ZE26	D3ZE26_RAT	Tmcc2	Transmembrane and coiled-coil domain family 2	1	LEEQLNDLTELHQNEMTNLK	LEEQLNDLTELHQNEMTNLK	3	LEEQLNDLTELHQNEMTNLK3	26312.1	24442.8	31396.7
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	LEEQSLHDVLFELSK	LEEQSLHDVLFELSK	2	LEEQSLHDVLFELSK2	3913.26		
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	LEEQSLHDVLFELSK	LEEQSLHDVLFELSK	3	LEEQSLHDVLFELSK3	51304.7	34461.7	38969.7
A0A8I5ZVY6	A0A8I5ZVY6	A0A8I5ZVY6_RAT	Rint1	RAD50 interactor 1	1	LEEQVLTISSEIPK	LEEQVLTISSEIPK	2	LEEQVLTISSEIPK2	5544.76	9382.53	7696.05
A0A8I5Y9U2	A0A8I5Y9U2	A0A8I5Y9U2_RAT	Cnot2	CCR4-NOT transcription complex, subunit 2	1	LEERPHLPSTFNYNPAQQAF	LEERPHLPSTFNYNPAQQAF	3	LEERPHLPSTFNYNPAQQAF3	6901.83	12354.6	12499.4
Q5U2R0	Q5U2R0	MAT2B_RAT	Mat2b	Methionine adenosyltransferase 2 subunit beta	1	LEESAVTVMFDK	LEESAVTVMFDK	2	LEESAVTVMFDK2	14493.7	7669.41	12431.1
O35094	O35094	TIM44_RAT	Timm44	Mitochondrial import inner membrane translocase subunit TIM44	1	LEESDALQEAR	LEESDALQEAR	2	LEESDALQEAR2	22761	15011.6	23127.8
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	LEESEILGAQER	LEESEILGAQER	2	LEESEILGAQER2	66247.9	74781.9	79409.9
A0A8I6G7J3	P01805;A0A8I6G7J3	A0A8I6G7J3_RAT	ENSRNOG00000070816	Ig-like domain-containing protein	0	LEESGGGLVQPGMSVK	LEESGGGLVQPGMSVK	2	LEESGGGLVQPGMSVK2	48882.7	45339.7	56692.8
A0A8I6G7J3	P01805;A0A8I6G7J3	A0A8I6G7J3_RAT	ENSRNOG00000070816	Ig-like domain-containing protein	0	LEESGGGLVQPGMSVK	LEESGGGLVQPGMSVK	3	LEESGGGLVQPGMSVK3	15082	12686.8	13577.3
A0A8I6AGR0	A0A8I6AGR0	A0A8I6AGR0_RAT	ENSRNOG00000068059	Ig-like domain-containing protein	1	LEESGGGLVQPGVSLK	LEESGGGLVQPGVSLK	2	LEESGGGLVQPGVSLK2	5674.64	2204.94	2352.64
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	LEESKEQVAAMQAGLLK	LEESKEQVAAMQAGLLK	3	LEESKEQVAAMQAGLLK3	3845.25	1852.57	5296.96
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	LEESLCPR	LEESLC(UniMod:4)PR	2	LEESLC(UniMod:4)PR2		13627.6	15823.1
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LEESLEYQQFVANVEEEEAWINEK	LEESLEYQQFVANVEEEEAWINEK	3	LEESLEYQQFVANVEEEEAWINEK3	42181.6	26821.9	26168.6
A0A0G2JUF2	A0A0G2JUF2	A0A0G2JUF2_RAT	Snx30	Sorting nexin family member 30	1	LEESQPTHLIPPLPEK	LEESQPTHLIPPLPEK	3	LEESQPTHLIPPLPEK3	8587.57	17160.1	10172.6
A0A8I6A5W7	A0A8I6A5W7	A0A8I6A5W7_RAT	Ccdc88a	Coiled coil domain containing 88A	1	LEESTNYNQQLR	LEESTNYNQQLR	2	LEESTNYNQQLR2	1430.16	474.159	1936.84
P63329	P63329	PP2BA_RAT	Ppp3ca	Protein phosphatase 3 catalytic subunit alpha	1	LEESVALR	LEESVALR	2	LEESVALR2	191922	189997	182923
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	LEESYELIEK	LEESYELIEK	2	LEESYELIEK2	50907.1	48625.4	51387.5
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	LEESYHYQVFR	LEESYHYQVFR	3	LEESYHYQVFR3	27256.1	43148.1	39538.8
E9PU02	E9PU02	E9PU02_RAT	Trappc9	Trafficking protein particle complex subunit 9	1	LEETLAQFPLQPGK	LEETLAQFPLQPGK	2	LEETLAQFPLQPGK2	5319.82	9713.03	5086.42
E9PU02	E9PU02	E9PU02_RAT	Trappc9	Trafficking protein particle complex subunit 9	1	LEETLAQFPLQPGK	LEETLAQFPLQPGK	3	LEETLAQFPLQPGK3	5164.87	11476.4	
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	LEETLEQLAK	LEETLEQLAK	2	LEETLEQLAK2	40326.5	35578.2	35852.5
E9PU10	E9PU10	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	1	LEETLLK	LEETLLK	2	LEETLLK2	153893	143677	148084
G3V9T7	G3V9T7	GET3_RAT	Get3	ATPase Get3	1	LEETLPVIR	LEETLPVIR	2	LEETLPVIR2	383119	342644	399290
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	LEETQTLLR	LEETQTLLR	2	LEETQTLLR2	244036	232487	232986
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	LEETQTLLRK	LEETQTLLRK	3	LEETQTLLRK3	12821	19198.5	11918
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	LEETVQAK	LEETVQAK	2	LEETVQAK2	87052.4	77683	101241
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	LEEVDDADDYDSR	LEEVDDADDYDSR	2	LEEVDDADDYDSR2	82450.1	93543.4	99130.7
P53610	P53610	PGTB1_RAT	Pggt1b	Geranylgeranyl transferase type-1 subunit beta	1	LEEVFSEK	LEEVFSEK	2	LEEVFSEK2	27250.4	23691.5	16834.5
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	LEEVGNQAR	LEEVGNQAR	2	LEEVGNQAR2	42706.5	23273.3	51462.9
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	LEEVREQMEEVR	LEEVREQMEEVR	2	LEEVREQMEEVR2	51114.1	66912.9	51944.3
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	LEEVREQMEEVR	LEEVREQMEEVR	3	LEEVREQMEEVR3	6.17384e+06	7.67888e+06	7.07555e+06
Q6U6G5	Q6U6G5;D4AA59	ZC3HF_RAT	Zc3h15	Zinc finger CCCH domain-containing protein 15	0	LEEVVNK	LEEVVNK	2	LEEVVNK2		35975.1	35349.4
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	LEEYLGSMAK	LEEYLGSMAK	2	LEEYLGSMAK2	24840.8	23608.6	16410.2
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	LEFAQDAR	LEFAQDAR	2	LEFAQDAR2	7379.2	14246.8	18222.1
A0A8I5ZUI2	A0A8I5ZUI2	A0A8I5ZUI2_RAT	Ano10	Anoctamin	1	LEFESLEALK	LEFESLEALK	2	LEFESLEALK2	39762.5	34753.1	33167.8
Q4QQV2	Q4QQV2	DOK1_RAT	Dok1	Docking protein 1	1	LEFFDHK	LEFFDHK	2	LEFFDHK2	20643.3	15294.8	18433.3
Q9WUK5	Q9WUK5	INHBC_RAT	Inhbc	Inhibin beta C chain	1	LEFHFSDR	LEFHFSDR	2	LEFHFSDR2	4577.88	6926.17	8030.58
Q63372	Q63372	NRX1A_RAT	Nrxn1	Neurexin-1	1	LEFHNIETGIITER	LEFHNIETGIITER	3	LEFHNIETGIITER3	8346.33	12877.4	12390.8
Q6P7B4	Q6P7B4	GAK1B_RAT	Gask1b	Golgi-associated kinase 1B	1	LEFIQDGRPR	LEFIQDGRPR	3	LEFIQDGRPR3	20265.4	14920.8	16362.3
P11960	P11960	ODBA_RAT	Bckdha	2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment)	1	LEFIQPNVISGIPIYR	LEFIQPNVISGIPIYR	2	LEFIQPNVISGIPIYR2	5135.89	9781.95	11854.4
P11960	P11960	ODBA_RAT	Bckdha	2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment)	1	LEFIQPNVISGIPIYR	LEFIQPNVISGIPIYR	3	LEFIQPNVISGIPIYR3	2988.58		3080.08
P55213	P55213	CASP3_RAT	Casp3	Caspase-3	1	LEFMHILTR	LEFMHILTR	2	LEFMHILTR2	5997.67	5202.18	1995.04
P55213	P55213	CASP3_RAT	Casp3	Caspase-3	1	LEFMHILTR	LEFMHILTR	3	LEFMHILTR3	27261.3	26859.8	31022.7
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	LEFPAPYWDNITDSAK	LEFPAPYWDNITDSAK	2	LEFPAPYWDNITDSAK2	21978.3	34636.6	15369
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	LEFPQVLYLDR	LEFPQVLYLDR	2	LEFPQVLYLDR2	22361.5	26504.2	22032.1
Q07803	Q07803	EFGM_RAT	Gfm1	Elongation factor G, mitochondrial	1	LEFSDETFGANVPK	LEFSDETFGANVPK	2	LEFSDETFGANVPK2	6871.21		6043.4
D3ZMI6	D3ZMI6	D3ZMI6_RAT	Olfm4	Olfactomedin 4	1	LEFTAHTLSQK	LEFTAHTLSQK	2	LEFTAHTLSQK2	16026.8	18737.4	22244.3
D3ZMI6	D3ZMI6	D3ZMI6_RAT	Olfm4	Olfactomedin 4	1	LEFTAHTLSQK	LEFTAHTLSQK	3	LEFTAHTLSQK3	117239	121962	117964
Q62784	Q62784	INP4A_RAT	Inpp4a	Inositol polyphosphate-4-phosphatase type I A	1	LEFVPTNLHIQR	LEFVPTNLHIQR	3	LEFVPTNLHIQR3	22012.9	6896.37	
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	LEGAEINK	LEGAEINK	1	LEGAEINK1	5261.42	10276	10691.9
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	LEGAEINK	LEGAEINK	2	LEGAEINK2	1.26996e+06	997909	1.22801e+06
A0A8I5ZK60	A0A8I5ZK60	A0A8I5ZK60_RAT	Ccer2	Coiled-coil glutamate-rich protein 2	1	LEGAGDLQK	LEGAGDLQK	2	LEGAGDLQK2	16561.1	16242.4	15141.9
B0BN20	B0BN20	B0BN20_RAT	Tspan6	Tetraspanin	1	LEGCYPQR	LEGC(UniMod:4)YPQR	2	LEGC(UniMod:4)YPQR2	18016	17698.6	22271.9
B0BN85	B0BN85	SGT1_RAT	Sugt1	Protein SGT1 homolog	1	LEGDAALNK	LEGDAALNK	2	LEGDAALNK2	20897.3	21804.3	26126.4
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	LEGDNIQDK	LEGDNIQDK	2	LEGDNIQDK2	46321.5	48876.2	49791.9
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	LEGDNVNPESQLIQQNEQSESEK	LEGDNVNPESQLIQQNEQSESEK	3	LEGDNVNPESQLIQQNEQSESEK3	29398.2	32131	31014.4
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LEGDSTDLSDQIAELQAQIAELK	LEGDSTDLSDQIAELQAQIAELK	3	LEGDSTDLSDQIAELQAQIAELK3	306374	472402	315985
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	LEGEAYQFHCTVPGNK	LEGEAYQFHC(UniMod:4)TVPGNK	3	LEGEAYQFHC(UniMod:4)TVPGNK3	16611.3	7210.91	16010.9
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	LEGEDDPDR	LEGEDDPDR	2	LEGEDDPDR2	92633.9	53645.8	
A0A8I6AGS4	A0A8I6AGS4	A0A8I6AGS4_RAT	Abi3bp	ABI family member 3 binding protein	1	LEGFLLGYGSNVSPNQYFPLPTEGK	LEGFLLGYGSNVSPNQYFPLPTEGK	3	LEGFLLGYGSNVSPNQYFPLPTEGK3	3650.11	4049.64	
Q63797	A0A0G2JVP9;Q63797	PSME1_RAT	Psme1	Proteasome activator complex subunit 1	0	LEGFQTQISK	LEGFQTQISK	2	LEGFQTQISK2	62797	68292	72418.6
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	LEGFTLPR	LEGFTLPR	2	LEGFTLPR2	78448	80986.9	85423.4
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	LEGFYGER	LEGFYGER	2	LEGFYGER2	85259.1	78593.4	105836
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	LEGGLPQEPTSR	LEGGLPQEPTSR	2	LEGGLPQEPTSR2	420754	450204	414625
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	LEGGQQVGMHSR	LEGGQQVGMHSR	3	LEGGQQVGMHSR3	26786.6	9628.2	10688.6
Q8R491	Q8R491	EHD3_RAT	Ehd3	EH domain-containing protein 3	1	LEGHELPSELPAHLLPPSK	LEGHELPSELPAHLLPPSK	3	LEGHELPSELPAHLLPPSK3	28048.5	35515.5	24202.7
Q8R491	Q8R491	EHD3_RAT	Ehd3	EH domain-containing protein 3	1	LEGHELPSELPAHLLPPSK	LEGHELPSELPAHLLPPSK	4	LEGHELPSELPAHLLPPSK4	176676	140650	190767
Q8R491	Q8R491	EHD3_RAT	Ehd3	EH domain-containing protein 3	1	LEGHELPSELPAHLLPPSKR	LEGHELPSELPAHLLPPSKR	4	LEGHELPSELPAHLLPPSKR4	5094.14	7334.86	7960.44
Q4V8H8	Q4V8H8	EHD2_RAT	Ehd2	EH domain-containing protein 2	1	LEGHGLPTNLPR	LEGHGLPTNLPR	3	LEGHGLPTNLPR3		6828.87	3183.44
Q9QZK8	Q9QZK8	DNS2A_RAT	Dnase2	Deoxyribonuclease-2-alpha	1	LEGIFAQK	LEGIFAQK	2	LEGIFAQK2	11839.1	12452.1	7172.47
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LEGIGQFHCR	LEGIGQFHC(UniMod:4)R	2	LEGIGQFHC(UniMod:4)R2	10712	7394	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LEGIGQFHCR	LEGIGQFHC(UniMod:4)R	3	LEGIGQFHC(UniMod:4)R3	59461.3	44302.8	52314
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	LEGIVNK	LEGIVNK	2	LEGIVNK2	386468	382730	409705
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	LEGLATAVTPNK	LEGLATAVTPNK	2	LEGLATAVTPNK2	27188	15193.4	24157
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LEGLDTDWDALWR	LEGLDTDWDALWR	2	LEGLDTDWDALWR2	72029.1	42840.6	62213.2
Q4FZU2	A0A8I5ZMI8;A0A0G2JUG1;A0A8I6G380;Q4FZU2;A0A8I6AP90	K2C6A_RAT	Krt6a	Keratin, type II cytoskeletal 6A	0	LEGLEDALQK	LEGLEDALQK	2	LEGLEDALQK2	49793.7	44468.5	38943.3
F1LU71	F1LU71	AUHM_RAT	Auh	Methylglutaconyl-CoA hydratase, mitochondrial	1	LEGLLAFK	LEGLLAFK	2	LEGLLAFK2	25260.8	19781.8	23134.8
D3ZVB7	D3ZVB7	D3ZVB7_RAT	Ogn	Osteoglycin	1	LEGNPIALGK	LEGNPIALGK	2	LEGNPIALGK2	12911.5	13482.6	22315.1
Q9QXY4	Q9QXY4	OGFR_RAT	Ogfr	Opioid growth factor receptor	1	LEGNRQEQVPGEADPQGVSEVEK	LEGNRQEQVPGEADPQGVSEVEK	3	LEGNRQEQVPGEADPQGVSEVEK3	11587.3	11825.1	18159
P35280	P35280	RAB8A_RAT	Rab8a	Ras-related protein Rab-8A	1	LEGNSPQGSSHGVK	LEGNSPQGSSHGVK	2	LEGNSPQGSSHGVK2			7333.82
P35280	P35280	RAB8A_RAT	Rab8a	Ras-related protein Rab-8A	1	LEGNSPQGSSHGVK	LEGNSPQGSSHGVK	3	LEGNSPQGSSHGVK3			42472.8
A0A8I6AMS6	A0A8I6AMS6	A0A8I6AMS6_RAT	Rangap1	RAN GTPase activating protein 1	1	LEGNTVGVEAAR	LEGNTVGVEAAR	2	LEGNTVGVEAAR2	20295	13633.3	18274.7
Q642B0	Q642B0;A0A096MJY1	Q642B0_RAT	Gpc4	Glypican 4	0	LEGPFNIESVMDPIDVK	LEGPFNIESVMDPIDVK	2	LEGPFNIESVMDPIDVK2	12833.1	14316	20913.5
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	LEGPGPAVLYQEVDEAIHQLVR	LEGPGPAVLYQEVDEAIHQLVR	3	LEGPGPAVLYQEVDEAIHQLVR3		27134.2	17765.8
D4ADG2	D4ADG2	D4ADG2_RAT	Iba57	Iron-sulfur cluster assembly factor IBA57	1	LEGPLPASGISPGTLVTVTATGQAAGK	LEGPLPASGISPGTLVTVTATGQAAGK	3	LEGPLPASGISPGTLVTVTATGQAAGK3	3717.96	4837.05	972.075
B0BN85	B0BN85	SGT1_RAT	Sugt1	Protein SGT1 homolog	1	LEGQGDVPAPK	LEGQGDVPAPK	2	LEGQGDVPAPK2		8619.52	13051.2
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	LEGQMGEDGNSIK	LEGQMGEDGNSIK	2	LEGQMGEDGNSIK2	1.43263e+06	1.47572e+06	1.53658e+06
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	LEGQRPENK	LEGQRPENK	2	LEGQRPENK2			8756
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	LEGQVESYK	LEGQVESYK	2	LEGQVESYK2	48547.3	32634.3	15208.6
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	LEGQVESYKK	LEGQVESYKK	2	LEGQVESYKK2	6114.29	6817.15	4680.37
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	LEGQVESYKK	LEGQVESYKK	3	LEGQVESYKK3	24389.5	29548.9	21536.8
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	LEGQVLR	LEGQVLR	2	LEGQVLR2	1.17638e+06	1.26907e+06	1.38549e+06
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	LEGSEVQLVEYEASAAGLIR	LEGSEVQLVEYEASAAGLIR	3	LEGSEVQLVEYEASAAGLIR3	17462.8	17476.4	18002.3
F1M3G7	F1M3G7	AKP13_RAT	Akap13	A-kinase anchor protein 13	1	LEGTDLSCPTSK	LEGTDLSC(UniMod:4)PTSK	2	LEGTDLSC(UniMod:4)PTSK2	3546.11	2927.34	
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	LEGTDPEVLYR	LEGTDPEVLYR	2	LEGTDPEVLYR2	26747.6	23664.5	22748.5
D3ZUY0	D3ZUY0	D3ZUY0_RAT	Rdh14	Retinol dehydrogenase 14	1	LEGTNVTVNVLHPGIVR	LEGTNVTVNVLHPGIVR	3	LEGTNVTVNVLHPGIVR3	17423.1	14386.1	20280.1
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	LEGTVWTEIDDTK	LEGTVWTEIDDTK	2	LEGTVWTEIDDTK2	132310	139516	158171
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	LEGVCER	LEGVC(UniMod:4)ER	2	LEGVC(UniMod:4)ER2	371100	371603	345092
P70531	P70531	EF2K_RAT	Eef2k	Eukaryotic elongation factor 2 kinase	1	LEGVDGGGSSGAGR	LEGVDGGGSSGAGR	2	LEGVDGGGSSGAGR2	3897.31	3494	1355.4
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LEGVEGVAHIIDPK	LEGVEGVAHIIDPK	2	LEGVEGVAHIIDPK2	27706.4	32762.5	22556.4
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LEGVEGVAHIIDPK	LEGVEGVAHIIDPK	3	LEGVEGVAHIIDPK3	105921	112391	112080
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	LEGVGEAVGGGTSAK	LEGVGEAVGGGTSAK	2	LEGVGEAVGGGTSAK2	8200.52	8586.19	6199.66
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	LEGVLPEVAQHYQDTLIR	LEGVLPEVAQHYQDTLIR	3	LEGVLPEVAQHYQDTLIR3	102184	93056.7	88429
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	LEGWCCQMDK	LEGWC(UniMod:4)C(UniMod:4)QMDK	2	LEGWC(UniMod:4)C(UniMod:4)QMDK2	7934	7781.74	12654.8
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	LEGWCCQMDKETK	LEGWC(UniMod:4)C(UniMod:4)QMDKETK	2	LEGWC(UniMod:4)C(UniMod:4)QMDKETK2		1670.94	
Q80W89	Q80W89	NDUAB_RAT	Ndufa11	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11	1	LEGWELFATPK	LEGWELFATPK	2	LEGWELFATPK2	72467	70397.2	81941
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	LEGWLSLPVR	LEGWLSLPVR	2	LEGWLSLPVR2	192218	211088	186452
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	LEGYWGEAQSLCQAVDEHLR	LEGYWGEAQSLC(UniMod:4)QAVDEHLR	3	LEGYWGEAQSLC(UniMod:4)QAVDEHLR3	8805.5	8954.02	8483
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	LEHAAALR	LEHAAALR	2	LEHAAALR2	13975	5235.87	6313.66
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LEHAFSK	LEHAFSK	1	LEHAFSK1	2048.58	1332.7	2943.16
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LEHAFSK	LEHAFSK	2	LEHAFSK2	38577.7	39596.4	34304.2
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	LEHALEK	LEHALEK	2	LEHALEK2	10721.7	7480.88	3748.02
B5DF93	B5DF93	PATL1_RAT	Patl1	Protein PAT1 homolog 1	1	LEHAYKPVQFEGSLGK	LEHAYKPVQFEGSLGK	4	LEHAYKPVQFEGSLGK4	12659.4	13410	11629.1
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	LEHDKEIWESK	LEHDKEIWESK	3	LEHDKEIWESK3	13624	3743.4	20427
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	LEHDVNIQFPDKDDGNQPQDQITITGYEK	LEHDVNIQFPDKDDGNQPQDQITITGYEK	4	LEHDVNIQFPDKDDGNQPQDQITITGYEK4	7650.29	6079.44	5553.1
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	LEHEDPSDPQTPLIFK	LEHEDPSDPQTPLIFK	3	LEHEDPSDPQTPLIFK3	7049.91	5174.04	5949.73
Q63686	O35832;Q63686;O35831	CDK16_RAT	Cdk16	Cyclin-dependent kinase 16	0	LEHEEGAPCTAIR	LEHEEGAPC(UniMod:4)TAIR	3	LEHEEGAPC(UniMod:4)TAIR3	20877.1	24489.1	22568.2
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	LEHEVDLCR	LEHEVDLC(UniMod:4)R	3	LEHEVDLC(UniMod:4)R3	7642.37	7562.81	2824.71
Q3B8Q0	Q3B8Q0;Q5XIT1	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	0	LEHEYIHNFK	LEHEYIHNFK	2	LEHEYIHNFK2	19480.6	17418.4	12292
Q3B8Q0	Q3B8Q0;Q5XIT1	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	0	LEHEYIHNFK	LEHEYIHNFK	3	LEHEYIHNFK3	307780	286699	273370
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	LEHEYIQNFK	LEHEYIQNFK	2	LEHEYIQNFK2	87594.2	75128.9	82515.9
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	LEHEYIQNFK	LEHEYIQNFK	3	LEHEYIQNFK3	936619	1.00474e+06	974248
Q4V8I7	Q4V8I7	LRC8A_RAT	Lrrc8a	Volume-regulated anion channel subunit LRRC8A	1	LEHFVSILLK	LEHFVSILLK	3	LEHFVSILLK3	3063.97	3458.05	2455.48
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LEHIMDLTR	LEHIMDLTR	2	LEHIMDLTR2	61631	54865.2	48323.1
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	LEHLFESR	LEHLFESR	2	LEHLFESR2	41624.5	51748.3	50008.8
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LEHLITELVHQR	LEHLITELVHQR	2	LEHLITELVHQR2	6094.07	5915.1	4174.09
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LEHLITELVHQR	LEHLITELVHQR	3	LEHLITELVHQR3	88526.1	120102	102873
Q5FVQ9	Q5FVQ9	TBCE_RAT	Tbce	Tubulin-specific chaperone E	1	LEHLLLSDIGLSSIHFPDAEIGCK	LEHLLLSDIGLSSIHFPDAEIGC(UniMod:4)K	4	LEHLLLSDIGLSSIHFPDAEIGC(UniMod:4)K4	5182.02	8322.64	5409.93
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	LEHLSVSHNNLTTLHGELSSLPSLR	LEHLSVSHNNLTTLHGELSSLPSLR	3	LEHLSVSHNNLTTLHGELSSLPSLR3	14157.9	14984.3	19110.1
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	LEHLSVSHNNLTTLHGELSSLPSLR	LEHLSVSHNNLTTLHGELSSLPSLR	4	LEHLSVSHNNLTTLHGELSSLPSLR4	93480.6	93205.4	105145
Q9EQP5	Q9EQP5	PRELP_RAT	Prelp	Prolargin	1	LEHLYLNNNSIEK	LEHLYLNNNSIEK	3	LEHLYLNNNSIEK3	5087.81	6588.63	4891.14
Q4KLH3	Q4KLH3	OGRL1_RAT	Ogfrl1	Opioid growth factor receptor-like protein 1	1	LEHNHTYIQWLFPLR	LEHNHTYIQWLFPLR	3	LEHNHTYIQWLFPLR3	6110.67	7765.24	9836.02
Q4KLH3	Q4KLH3	OGRL1_RAT	Ogfrl1	Opioid growth factor receptor-like protein 1	1	LEHNHTYIQWLFPLR	LEHNHTYIQWLFPLR	4	LEHNHTYIQWLFPLR4	33598.6	38248.9	31053.9
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	LEHQFAVK	LEHQFAVK	2	LEHQFAVK2	2084.75		
O70467	O70467	ANM3_RAT	Prmt3	Protein arginine N-methyltransferase 3	1	LEHQFNIDGMVHK	LEHQFNIDGMVHK	4	LEHQFNIDGMVHK4		2161.87	2980.23
Q5HZE4	Q5HZE4	MTNA_RAT	Mri1	Methylthioribose-1-phosphate isomerase	1	LEHTFCTETRPYNQGAR	LEHTFC(UniMod:4)TETRPYNQGAR	4	LEHTFC(UniMod:4)TETRPYNQGAR4	9389.88	13256.8	14291.6
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	LEHTLAR	LEHTLAR	2	LEHTLAR2	7957.96	23794.6	3243.08
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	LEHVDFECLFK	LEHVDFEC(UniMod:4)LFK	3	LEHVDFEC(UniMod:4)LFK3	18483.6	19262.2	13223.2
P23377	P23377	FURIN_RAT	Furin	Furin	1	LEHVQAR	LEHVQAR	2	LEHVQAR2			14675.7
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	LEHWYVTGLR	LEHWYVTGLR	2	LEHWYVTGLR2	1572.17	5442.51	8467.33
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	LEHWYVTGLR	LEHWYVTGLR	3	LEHWYVTGLR3	32634.7	35308.1	43905.5
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	LEIAGTVVGHWAGSR	LEIAGTVVGHWAGSR	3	LEIAGTVVGHWAGSR3	18630.1	11614.5	21478.4
P27274	P27274	CD59_RAT	Cd59	CD59 glycoprotein	1	LEIANVQYR	LEIANVQYR	2	LEIANVQYR2	207371	176160	229911
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	LEICALR	LEIC(UniMod:4)ALR	2	LEIC(UniMod:4)ALR2	41241.8	33979.2	41631.1
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	LEICHEVSEPR	LEIC(UniMod:4)HEVSEPR	2	LEIC(UniMod:4)HEVSEPR2	3811.51		
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	LEICHEVSEPR	LEIC(UniMod:4)HEVSEPR	3	LEIC(UniMod:4)HEVSEPR3	61871.5	57679.3	64224.6
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	LEICNLTPDALK	LEIC(UniMod:4)NLTPDALK	2	LEIC(UniMod:4)NLTPDALK2	210747	203164	193578
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	LEICNLTPDTLTCDSYK	LEIC(UniMod:4)NLTPDTLTC(UniMod:4)DSYK	3	LEIC(UniMod:4)NLTPDTLTC(UniMod:4)DSYK3	190895	208478	204495
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	LEICNLTPDTLTCDSYKK	LEIC(UniMod:4)NLTPDTLTC(UniMod:4)DSYKK	3	LEIC(UniMod:4)NLTPDTLTC(UniMod:4)DSYKK3	337294	386432	402178
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	LEIELFK	LEIELFK	2	LEIELFK2	110885	105911	106494
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	LEIELFKGDR	LEIELFKGDR	3	LEIELFKGDR3	19356.6	19303.3	21794.7
G3V6L9	G3V6L9	G3V6L9_RAT	Fkbp3	peptidylprolyl isomerase	1	LEIEPEWAYGK	LEIEPEWAYGK	2	LEIEPEWAYGK2	8449.85	5535.32	4306.25
Q9JI03	Q9JI03	CO5A1_RAT	Col5a1	Collagen alpha-1(V) chain	1	LEIEQMK	LEIEQMK	2	LEIEQMK2	76625.3	71695.2	61318.2
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	LEIESNICR	LEIESNIC(UniMod:4)R	2	LEIESNIC(UniMod:4)R2	31242.3	23074.4	33621.4
Q5M849	Q5M849	Q5M849_RAT	Ifi35	Interferon-induced protein 35	1	LEIFFGK	LEIFFGK	2	LEIFFGK2	66605.6	53907.3	60579.5
A0A0G2JUC9	A0A0G2JUC9	A0A0G2JUC9_RAT	Herc2	HECT-type E3 ubiquitin transferase	1	LEIFPDVLVHR	LEIFPDVLVHR	3	LEIFPDVLVHR3	1508.72	3689.26	2835.4
A0A8I6A822	A0A8I6A822	A0A8I6A822_RAT	Tm9sf3	Transmembrane 9 superfamily member	1	LEIGFNGNR	LEIGFNGNR	2	LEIGFNGNR2	87355.3	78075.3	109978
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	LEIHGGPPQNYISSHTSEENVSAGPAILR	LEIHGGPPQNYISSHTSEENVSAGPAILR	4	LEIHGGPPQNYISSHTSEENVSAGPAILR4	4450.58	2675.65	3492.73
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	LEIIQSQR	LEIIQSQR	2	LEIIQSQR2	68676	57966	74267.4
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	LEILDSQVSDK	LEILDSQVSDK	2	LEILDSQVSDK2	13728.7	16017.2	15664.4
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	LEILEELVK	LEILEELVK	2	LEILEELVK2	11499.3	13780.7	7401.2
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	LEILGCEAQQLD	LEILGC(UniMod:4)EAQQLD	2	LEILGC(UniMod:4)EAQQLD2	49818.9	44948.7	37664.3
D4A254	D4A254	D4A254_RAT	Phlpp2	PH domain and leucine rich repeat protein phosphatase 2	1	LEILNLGVLTR	LEILNLGVLTR	2	LEILNLGVLTR2	794.02	196.17	
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	LEILQIHTK	LEILQIHTK	2	LEILQIHTK2	432878	403954	342972
Q5RJP5	Q5RJP5	Q5RJP5_RAT	Isg20	Interferon stimulated exonuclease 20	1	LEILQLLK	LEILQLLK	2	LEILQLLK2	16853.2	15719.4	23191.1
O35165	O35165	GOSR2_RAT	Gosr2	Golgi SNAP receptor complex member 2	1	LEILSSK	LEILSSK	2	LEILSSK2	141388	114758	108788
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	LEILTNLANEANISTLLR	LEILTNLANEANISTLLR	3	LEILTNLANEANISTLLR3	14193.3	20191.3	10710.5
D3ZZB2	D3ZZB2	D3ZZB2_RAT	Pex1	Peroxisomal ATPase PEX1	1	LEILTVLSK	LEILTVLSK	2	LEILTVLSK2	5487.13	4653.18	4550.1
Q64165	Q64165	Q64165_RAT	Gcnt1	Glucosaminyl (N-acetyl) transferase 1	1	LEILTVQFK	LEILTVQFK	2	LEILTVQFK2	9465.44	15313.3	19029.5
F1LN92	A0A8I5ZQ14;F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	0	LEIMEFVNFLK	LEIMEFVNFLK	2	LEIMEFVNFLK2	7400.51	1547.58	4914.15
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	LEINMLK	LEINMLK	2	LEINMLK2	46698.5	49181.4	42640.8
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	LEISPSPSQR	LEISPSPSQR	2	LEISPSPSQR2	302718	291385	294566
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	LEISVDQYPTR	LEISVDQYPTR	2	LEISVDQYPTR2	79685.1	98728.6	93351.3
Q9QWJ9	Q9QWJ9	NRP1_RAT	Nrp1	Neuropilin-1	1	LEIWDGFPEVGPHIGR	LEIWDGFPEVGPHIGR	3	LEIWDGFPEVGPHIGR3	7470	11690.4	
Q5RJS3	Q5RJS3	Q5RJS3_RAT	Ciao2a	Cytosolic iron-sulfur assembly component 2A	1	LEIYISEGTHSTEEDINK	LEIYISEGTHSTEEDINK	3	LEIYISEGTHSTEEDINK3	27955.8	21221.4	9303.36
A0A8I5Y9A0	A0A8I5Y9A0	A0A8I5Y9A0_RAT	Tex264	Testis expressed 264	1	LEIYQQDQIHFMCPLAR	LEIYQQDQIHFMC(UniMod:4)PLAR	3	LEIYQQDQIHFMC(UniMod:4)PLAR3	17632	11814.1	13045.3
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	LEIYVVTAEGLRPVK	LEIYVVTAEGLRPVK	3	LEIYVVTAEGLRPVK3	52455.1	55643.5	28555.8
D4AAU6	D4AAU6	D4AAU6_RAT	Ccdc25	Coiled-coil domain-containing protein 25	1	LEKFPDLAAEK	LEKFPDLAAEK	3	LEKFPDLAAEK3	4107.67	2156.23	1581.59
D3ZCD0	D3ZCD0	D3ZCD0_RAT	Tek	receptor protein-tyrosine kinase	1	LEKPLNCDDEVYDLMR	LEKPLNC(UniMod:4)DDEVYDLMR	3	LEKPLNC(UniMod:4)DDEVYDLMR3	7640.39		12060.9
P13839	P13839	SIAL_RAT	Ibsp	Bone sialoprotein 2	1	LELAALQLPK	LELAALQLPK	2	LELAALQLPK2	79470.5	78855.2	79498.4
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	LELADYLCEDPQK	LELADYLC(UniMod:4)EDPQK	2	LELADYLC(UniMod:4)EDPQK2	272429	296697	273857
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	LELADYLCEDPQK	LELADYLC(UniMod:4)EDPQK	3	LELADYLC(UniMod:4)EDPQK3	22078.2	28989.9	20887
A0A8I5ZT87	A0A8I5ZT87	A0A8I5ZT87_RAT	Mycbp	Myc binding protein	1	LELAEMK	LELAEMK	2	LELAEMK2	183446	194069	201300
D3ZZ81	A0A8I6AK94;D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	0	LELAEQK	LELAEQK	2	LELAEQK2	84466.3	98875.7	86384.7
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LELANIQAELVAK	LELANIQAELVAK	2	LELANIQAELVAK2	60355.3	70584.5	60758.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LELANIQAELVAK	LELANIQAELVAK	3	LELANIQAELVAK3	3584.91	2176.78	2958.29
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	LELAQQQTR	LELAQQQTR	2	LELAQQQTR2	31190.7	18873.2	19223.2
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	LELAQYR	LELAQYR	2	LELAQYR2	2.59853e+06	2.75842e+06	2.99724e+06
Q63372	Q63372	NRX1A_RAT	Nrxn1	Neurexin-1	1	LELDAGR	LELDAGR	2	LELDAGR2	24856.4	26770.3	21872.3
Q76MX4	A0A8I6AW56;Q76MX4	MAFG_RAT	Mafg	Transcription factor MafG	0	LELDALR	LELDALR	2	LELDALR2	16042.6	8548.65	10953.6
D3ZEJ9	D3ZEJ9	D3ZEJ9_RAT	RGD1310429	Similar to Protein Njmu-R1	1	LELDKYIQGLK	LELDKYIQGLK	3	LELDKYIQGLK3	13358.8	11086.5	16904.1
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	LELDQLEVR	LELDQLEVR	2	LELDQLEVR2	46823.3	53905.4	60229.6
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	LELEAAQK	LELEAAQK	2	LELEAAQK2	75772.1	64289.7	
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	LELEQLK	LELEQLK	2	LELEQLK2	87960.8	77981	79728.5
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	LELEWQHPSPWAAQETCYQLR	LELEWQHPSPWAAQETC(UniMod:4)YQLR	3	LELEWQHPSPWAAQETC(UniMod:4)YQLR3	49844.9	57012.7	51354.2
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	LELFGCDIY	LELFGC(UniMod:4)DIY	2	LELFGC(UniMod:4)DIY2	302318	304193	262482
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	LELFGCR	LELFGC(UniMod:4)R	2	LELFGC(UniMod:4)R2	37047	27029.9	26362.5
Q63054	Q63054	ICA69_RAT	Ica1	Islet cell autoantigen 1	1	LELFHSIQR	LELFHSIQR	3	LELFHSIQR3	4811.19	5670.64	10928.3
Q9EQX9	Q9EQX9	UBE2N_RAT	Ube2n	Ubiquitin-conjugating enzyme E2 N	1	LELFLPEEYPMAAPK	LELFLPEEYPMAAPK	2	LELFLPEEYPMAAPK2	10891.4	35645.5	41762.9
O35274	O35274;O35867	NEB2_RAT	Ppp1r9b	Neurabin-2	0	LELFPVELEK	LELFPVELEK	2	LELFPVELEK2	45187.7	53340.5	45367
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	LELGTPPEALGPSGHR	LELGTPPEALGPSGHR	3	LELGTPPEALGPSGHR3	53782.5	37659.2	54813.8
D4A1B2	D4A1B2	D4A1B2_RAT	Arpin	Arpin	1	LELGTVTK	LELGTVTK	2	LELGTVTK2	237312	252016	175575
D3ZEJ2	D3ZEJ2	D3ZEJ2_RAT	Mcur1	Mitochondrial calcium uniporter regulator 1	1	LELHQLK	LELHQLK	2	LELHQLK2	2094.04	1300.18	2608.29
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	LELIPEAK	LELIPEAK	2	LELIPEAK2	47970.5	45888.8	41142.8
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	LELLELDHEQTR	LELLELDHEQTR	3	LELLELDHEQTR3	34024.7	35335.2	30999.1
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	LELLELDHEQTRR	LELLELDHEQTRR	3	LELLELDHEQTRR3		10897.2	10928.1
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	LELLELDHEQTRR	LELLELDHEQTRR	4	LELLELDHEQTRR4	16619.7	15236.6	22897
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	LELLGCEVNGCSTPLGLEDGR	LELLGC(UniMod:4)EVNGC(UniMod:4)STPLGLEDGR	3	LELLGC(UniMod:4)EVNGC(UniMod:4)STPLGLEDGR3	1.36319e+06	1.52793e+06	1.49966e+06
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	LELLGCEVNGCSTPLGLEDGRIQNK	LELLGC(UniMod:4)EVNGC(UniMod:4)STPLGLEDGRIQNK	3	LELLGC(UniMod:4)EVNGC(UniMod:4)STPLGLEDGRIQNK3	6166.55	7224.64	7011
Q9JHW5	Q9JHW5	VAMP7_RAT	Vamp7	Vesicle-associated membrane protein 7	1	LELLIDK	LELLIDK	1	LELLIDK1	2563.57		2802.52
Q9JHW5	Q9JHW5	VAMP7_RAT	Vamp7	Vesicle-associated membrane protein 7	1	LELLIDK	LELLIDK	2	LELLIDK2	194883	168753	194746
Q9JHW5	Q9JHW5	VAMP7_RAT	Vamp7	Vesicle-associated membrane protein 7	1	LELLIDKTENLVDSSVTFK	LELLIDKTENLVDSSVTFK	3	LELLIDKTENLVDSSVTFK3	6592.57		
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LELLLQIANK	LELLLQIANK	2	LELLLQIANK2	12354.9	13489.2	13526.4
Q6MG59	Q6MG59	G6B_RAT	Mpig6b	Megakaryocyte and platelet inhibitory receptor G6b	1	LELLLSAGDSGTFFCK	LELLLSAGDSGTFFC(UniMod:4)K	2	LELLLSAGDSGTFFC(UniMod:4)K2	47364.8	25421.1	30463.5
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	LELLSIDTER	LELLSIDTER	2	LELLSIDTER2	4688.95	7776.27	5260.25
Q63615	Q63615	VP33A_RAT	Vps33a	Vacuolar protein sorting-associated protein 33A	1	LELMDMIAENVLSEDR	LELMDMIAENVLSEDR	2	LELMDMIAENVLSEDR2	2660.57		1875.95
Q63615	Q63615	VP33A_RAT	Vps33a	Vacuolar protein sorting-associated protein 33A	1	LELMDMIAENVLSEDRR	LELMDMIAENVLSEDRR	3	LELMDMIAENVLSEDRR3	17602	36028.7	11198.6
Q99M64	Q99M64	P4K2A_RAT	Pi4k2a	Phosphatidylinositol 4-kinase type 2-alpha	1	LELNIVPR	LELNIVPR	2	LELNIVPR2	14806.3	7555.82	14119.2
A0A8I6A1D9	A0A8I6A1D9	A0A8I6A1D9_RAT	Use1	Vesicle transport protein USE1	1	LELNLVR	LELNLVR	2	LELNLVR2	23428	21054	
Q6AXV4	Q6AXV4	SAM50_RAT	Samm50	Sorting and assembly machinery component 50 homolog	1	LELNYCIPMGVQR	LELNYC(UniMod:4)IPMGVQR	2	LELNYC(UniMod:4)IPMGVQR2	39579.8	36296.6	34482.7
Q6AXV4	Q6AXV4	SAM50_RAT	Samm50	Sorting and assembly machinery component 50 homolog	1	LELNYCIPMGVQR	LELNYC(UniMod:4)IPMGVQR	3	LELNYC(UniMod:4)IPMGVQR3	3688.19	6646.07	8203.37
A0A8I6ALT5	A0A8I6ALT5	A0A8I6ALT5_RAT	Dok2	Docking protein 2	1	LELQDGPEK	LELQDGPEK	2	LELQDGPEK2	36002.7	29459.7	49010.3
P13383	P13383	NUCL_RAT	Ncl	Nucleolin	1	LELQGPR	LELQGPR	2	LELQGPR2	13323.9	9272.21	4266.06
O35462	O35462	ANGP2_RAT	Angpt2	Angiopoietin-2	1	LELQLLQHSISTNK	LELQLLQHSISTNK	3	LELQLLQHSISTNK3	14106.5	17929.9	18368.2
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	LELQLRPAR	LELQLRPAR	2	LELQLRPAR2	10967.6	9980.87	4393.42
D3ZE26	D3ZE26	D3ZE26_RAT	Tmcc2	Transmembrane and coiled-coil domain family 2	1	LELQQQQQQVVQLEGVENANAR	LELQQQQQQVVQLEGVENANAR	3	LELQQQQQQVVQLEGVENANAR3	8342.57	8245.05	6987.89
Q7TT49	Q7TT49;D3Z837	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	0	LELQSALEAEIR	LELQSALEAEIR	2	LELQSALEAEIR2	8558.11	13015.7	8398.86
P49911	P49911;Q9EST6	AN32A_RAT	Anp32a	Acidic leucine-rich nuclear phosphoprotein 32 family member A	0	LELSENR	LELSENR	2	LELSENR2	528542	550982	452071
D3ZT64	D3ZT64	D3ZT64_RAT	Atg2a	Autophagy related 2A	1	LELSEPQFR	LELSEPQFR	2	LELSEPQFR2	24552	14692.5	17389
A0A8I6A371	A0A8I6A371	A0A8I6A371_RAT	Nmi	N-myc (and STAT) interactor	1	LELSFYK	LELSFYK	2	LELSFYK2	34693.6	40414.9	37963.2
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	LELSQNQNVK	LELSQNQNVK	2	LELSQNQNVK2	82530.4	75500.1	75809.4
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	LELSSSR	LELSSSR	2	LELSSSR2	112843	108591	99892.9
B2RYG6	B2RYG6	OTUB1_RAT	Otub1	Ubiquitin thioesterase OTUB1	1	LELSVLYK	LELSVLYK	2	LELSVLYK2	122893	113635	93928.9
D3ZT64	D3ZT64	D3ZT64_RAT	Atg2a	Autophagy related 2A	1	LELTCLDLQGIYEDGEKPPVPCLR	LELTC(UniMod:4)LDLQGIYEDGEKPPVPC(UniMod:4)LR	3	LELTC(UniMod:4)LDLQGIYEDGEKPPVPC(UniMod:4)LR3	3596.28	4782.9	3353.28
B5DF57	B5DF57	B5DF57_RAT	Epb42	protein-glutamine gamma-glutamyltransferase	1	LELTNSNR	LELTNSNR	2	LELTNSNR2	17273.9	14656.6	7118.28
O89049	O89049	TRXR1_RAT	Txnrd1	Thioredoxin reductase 1, cytoplasmic	1	LELTPVAIQAGR	LELTPVAIQAGR	2	LELTPVAIQAGR2	10391.3	8474.63	8314.68
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	LELWCTDVK	LELWC(UniMod:4)TDVK	2	LELWC(UniMod:4)TDVK2	68067	40975.8	46571.4
Q4KLL4	Q4KLL4	TM9S4_RAT	Tm9sf4	Transmembrane 9 superfamily member 4	1	LELYSSNR	LELYSSNR	2	LELYSSNR2	128976	127101	132607
D3ZRE7	D3ZRE7	D3ZRE7_RAT	Swap70	Switching B-cell complex subunit SWAP70	1	LEMATNTTK	LEMATNTTK	2	LEMATNTTK2	6102.81	4572.63	6843.71
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	LEMDGHLNK	LEMDGHLNK	2	LEMDGHLNK2	47407.6	39783.3	38224.8
D4ACF2	D4ACF2	D4ACF2_RAT	Trim21	RING-type E3 ubiquitin transferase	1	LEMDLAMQR	LEMDLAMQR	2	LEMDLAMQR2	4507.05	4579.04	9432.63
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LEMDLKDLEAHIDTANK	LEMDLKDLEAHIDTANK	3	LEMDLKDLEAHIDTANK3	106134	135765	126431
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LEMDLKDLEAHIDTANK	LEMDLKDLEAHIDTANK	4	LEMDLKDLEAHIDTANK4	145155	245015	220735
Q6AYH6	Q6AYH6	EMC10_RAT	Emc10	ER membrane protein complex subunit 10	1	LEMEQAQK	LEMEQAQK	2	LEMEQAQK2	75530.9	61383	76840.1
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	LEMIAMENPADLK	LEMIAMENPADLK	2	LEMIAMENPADLK2	3231.02		3671.82
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	LEMIAMENPADLKK	LEMIAMENPADLKK	3	LEMIAMENPADLKK3	3360.19	17990.7	3167.85
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	LEMMPEFQK	LEMMPEFQK	2	LEMMPEFQK2	21126.6	14768.7	17309.2
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LEMNLGLQK	LEMNLGLQK	2	LEMNLGLQK2	555363	594955	458463
F7EMK2	F7EMK2	F7EMK2_RAT	Dpagt1	UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase	1	LEMSYSK	LEMSYSK	2	LEMSYSK2	67789.6	61483.3	71677.1
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	LEMVGFK	LEMVGFK	2	LEMVGFK2	20963.2	31421.5	21886.6
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	LEMVPASR	LEMVPASR	2	LEMVPASR2	89717.3	86904.4	74529.5
E9PSX4	E9PSX4	E9PSX4_RAT	Il3ra	Interleukin 3 receptor subunit alpha	1	LEMVYETEFK	LEMVYETEFK	2	LEMVYETEFK2	4056.75	4029.75	5237.36
P08025	P08025	IGF1_RAT	Igf1	Insulin-like growth factor I	1	LEMYCAPLKPTK	LEMYC(UniMod:4)APLKPTK	3	LEMYC(UniMod:4)APLKPTK3	6818.48	4721.96	2238.46
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	LEMYVLNPVK	LEMYVLNPVK	2	LEMYVLNPVK2	5235.03	3348.48	2630.75
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	LENAGSLK	LENAGSLK	2	LENAGSLK2	63973.4	53403.9	69008.3
P29315	P29315	RINI_RAT	Rnh1	Ribonuclease inhibitor	1	LENCGITSANCK	LENC(UniMod:4)GITSANC(UniMod:4)K	2	LENC(UniMod:4)GITSANC(UniMod:4)K2	46530.2	39024.8	40822.1
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	LENCNYAVDLGK	LENC(UniMod:4)NYAVDLGK	2	LENC(UniMod:4)NYAVDLGK2	8254	12579.5	11703.5
Q63598	Q63598	PLST_RAT	Pls3	Plastin-3	1	LENCNYAVELGK	LENC(UniMod:4)NYAVELGK	2	LENC(UniMod:4)NYAVELGK2	33853.4	18142.9	35295.9
Q68FP9	Q68FP9	COG6_RAT	Cog6	Conserved oligomeric Golgi complex subunit 6	1	LENDKEMLEALK	LENDKEMLEALK	3	LENDKEMLEALK3	12647.7	17455.3	15196.5
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	LENDQIENLR	LENDQIENLR	2	LENDQIENLR2	21991.8	15439.5	14575.7
D4AEK9	D4AEK9	D4AEK9_RAT	Ccdc6	Coiled-coil domain containing 6	1	LENDTISK	LENDTISK	2	LENDTISK2	69660.5	64278.8	73256.1
Q6IFW6	Q6IFW6	K1C10_RAT	Krt10	Keratin, type I cytoskeletal 10	1	LENEIQTYR	LENEIQTYR	2	LENEIQTYR2	1.12547e+06	903772	750843
Q91Z80	A0A8I6AK94;Q91Z80	LIPA4_RAT	Ppfia4	Liprin-alpha-4 (Fragment)	0	LENELANK	LENELANK	2	LENELANK2	100643	89777.4	80115.4
O70593	O70593	SGTA_RAT	Sgta	Small glutamine-rich tetratricopeptide repeat-containing protein alpha	1	LENFEAAVHLYGK	LENFEAAVHLYGK	2	LENFEAAVHLYGK2	12951.7	17817.2	9779.83
O70593	O70593	SGTA_RAT	Sgta	Small glutamine-rich tetratricopeptide repeat-containing protein alpha	1	LENFEAAVHLYGK	LENFEAAVHLYGK	3	LENFEAAVHLYGK3	81467.4	78086.4	79765.9
P09215	P09215	KPCD_RAT	Prkcd	Protein kinase C delta type	1	LENFTFQK	LENFTFQK	2	LENFTFQK2	29912.9	21685.3	21647.7
Q7TP48	Q7TP48	APMAP_RAT	Apmap	Adipocyte plasma membrane-associated protein	1	LENGEIETIAR	LENGEIETIAR	2	LENGEIETIAR2	49872.1	43666.8	50536.2
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	LENGSITQNER	LENGSITQNER	2	LENGSITQNER2	7104.43	3088.97	6625.56
Q8CGU6	Q8CGU6	NICA_RAT	Ncstn	Nicastrin	1	LENIDSFVELGQVALR	LENIDSFVELGQVALR	2	LENIDSFVELGQVALR2	10054	18545.8	8843.08
Q8CGU6	Q8CGU6	NICA_RAT	Ncstn	Nicastrin	1	LENIDSFVELGQVALR	LENIDSFVELGQVALR	3	LENIDSFVELGQVALR3	11451	5025.41	9479.76
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	LENIISDLK	LENIISDLK	2	LENIISDLK2	54304.5	70497.4	50394.2
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	LENIIVTDVDPK	LENIIVTDVDPK	2	LENIIVTDVDPK2	15729.9	20085.7	20657.4
Q9EQP5	Q9EQP5	PRELP_RAT	Prelp	Prolargin	1	LENLLLLDLQHNR	LENLLLLDLQHNR	3	LENLLLLDLQHNR3	3512.58	6247.76	4618.5
Q63362	A0A8I6AIC3;Q63362	NDUA5_RAT	Ndufa5	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5	0	LENLLQGGEVEEVILQAEK	LENLLQGGEVEEVILQAEK	3	LENLLQGGEVEEVILQAEK3	7880.98	7625.7	13210.2
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	LENLLQLSAEDFEKEK	LENLLQLSAEDFEKEK	3	LENLLQLSAEDFEKEK3			18198.6
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	LENLLQLSAEDFEKEKEEAR	LENLLQLSAEDFEKEKEEAR	3	LENLLQLSAEDFEKEKEEAR3	5410.62	9521.08	11305.6
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	LENLLQLSAEDFEKEKEEAR	LENLLQLSAEDFEKEKEEAR	4	LENLLQLSAEDFEKEKEEAR4	24297.2	22791.9	14494.5
Q63484	P47196;P47197;Q63484	AKT3_RAT	Akt3	RAC-gamma serine/threonine-protein kinase	0	LENLMLDKDGHIK	LENLMLDKDGHIK	4	LENLMLDKDGHIK4	9405.34	16500	18696.1
D3ZES2	D3ZES2	D3ZES2_RAT	Trappc6b	Trafficking protein particle complex subunit 6B	1	LENMGFR	LENMGFR	2	LENMGFR2	36559.5	37298.5	39732.7
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LENMYHLFQLK	LENMYHLFQLK	2	LENMYHLFQLK2	4233.25	4401.04	4587.52
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LENMYHLFQLK	LENMYHLFQLK	3	LENMYHLFQLK3	49771.5	52800.5	56689.8
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	LENNHAQLLR	LENNHAQLLR	2	LENNHAQLLR2	36698.4	22925.1	7051.27
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	LENNHAQLLR	LENNHAQLLR	3	LENNHAQLLR3	1.30968e+06	1.3083e+06	1.2574e+06
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	LENPDEACAVSQK	LENPDEAC(UniMod:4)AVSQK	2	LENPDEAC(UniMod:4)AVSQK2	8537.74	17628.1	10085.5
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	LENQQMMK	LENQQMMK	2	LENQQMMK2	36574.8	44402.2	39631.7
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	LENSIIPVHK	LENSIIPVHK	2	LENSIIPVHK2	2215.2	4128.01	
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	LENSIIPVHK	LENSIIPVHK	3	LENSIIPVHK3	24539.3	26912.9	23453.6
Q5XIG4	Q5XIG4	OCAD1_RAT	Ociad1	OCIA domain-containing protein 1	1	LENSPLGEALR	LENSPLGEALR	2	LENSPLGEALR2	28189.4	21079.7	25293
Q6AZ61	Q6AZ61	LMBD1_RAT	Lmbrd1	Lysosomal cobalamin transport escort protein LMBD1	1	LENTEDIEEVEQHIQTIR	LENTEDIEEVEQHIQTIR	3	LENTEDIEEVEQHIQTIR3	27982.8	31200.5	13492
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	LENTMELYR	LENTMELYR	2	LENTMELYR2	17641.2	36063.7	37120.8
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	LENVLNR	LENVLNR	2	LENVLNR2	51593.4	52293.9	40620.6
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	LENVSLSHQLTETQHR	LENVSLSHQLTETQHR	3	LENVSLSHQLTETQHR3	7044.28	5818.79	5259.63
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	LENVSLSHQLTETQHR	LENVSLSHQLTETQHR	4	LENVSLSHQLTETQHR4	7772.93	8079.63	14695.6
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	LENWITSLAESQLQTR	LENWITSLAESQLQTR	2	LENWITSLAESQLQTR2	21939.1	15975.8	25202.9
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	LENWITSLAESQLQTR	LENWITSLAESQLQTR	3	LENWITSLAESQLQTR3	4078.94	7510.29	7574.9
O35462	O35462	ANGP2_RAT	Angpt2	Angiopoietin-2	1	LENYIQDNMK	LENYIQDNMK	2	LENYIQDNMK2	7520.8	13292.9	6643.53
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	LENYIVENMK	LENYIVENMK	2	LENYIVENMK2	312301	291907	340611
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	LEPDILLR	LEPDILLR	2	LEPDILLR2	333024	324452	326727
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	LEPDLYEACK	LEPDLYEAC(UniMod:4)K	2	LEPDLYEAC(UniMod:4)K2	31338.4	32679.2	30719.8
Q63362	A0A8I6AIC3;Q63362	NDUA5_RAT	Ndufa5	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5	0	LEPDVKK	LEPDVKK	2	LEPDVKK2	23505.1	30467.6	39966.3
A0A8I5ZKH1	A0A8I5ZKH1	A0A8I5ZKH1_RAT	Ythdc2	RNA helicase	1	LEPEAASLLLQLR	LEPEAASLLLQLR	2	LEPEAASLLLQLR2	2841.77	5898.2	7860.68
P16446	P16446	PIPNA_RAT	Pitpna	Phosphatidylinositol transfer protein alpha isoform	1	LEPEAWK	LEPEAWK	2	LEPEAWK2	122372	60528.2	
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	LEPEQYEDACR	LEPEQYEDAC(UniMod:4)R	2	LEPEQYEDAC(UniMod:4)R2	17070	24396.6	
B1H257	B1H257	B1H257_RAT	Borcs5	BLOC-1-related complex subunit 5	1	LEPFSMRPER	LEPFSMRPER	3	LEPFSMRPER3	30476.7		48249.1
D3ZHQ1	D3ZHQ1	D3ZHQ1_RAT	Dpp8	Dipeptidylpeptidase 8	1	LEPFYVER	LEPFYVER	2	LEPFYVER2	62531.9	48064.6	59651.1
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	LEPGAATGPK	LEPGAATGPK	2	LEPGAATGPK2	126849	140952	119514
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	LEPGHPR	LEPGHPR	2	LEPGHPR2			120572
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	LEPGQPQLSPGVSTIHLHPQFPVVVEK	LEPGQPQLSPGVSTIHLHPQFPVVVEK	3	LEPGQPQLSPGVSTIHLHPQFPVVVEK3	4546.29	5743.44	
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	LEPGQPQLSPGVSTIHLHPQFPVVVEK	LEPGQPQLSPGVSTIHLHPQFPVVVEK	4	LEPGQPQLSPGVSTIHLHPQFPVVVEK4	40574.9	31776.9	35409.6
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	LEPHVFALADVAYYTMLR	LEPHVFALADVAYYTMLR	3	LEPHVFALADVAYYTMLR3	24902	21728.2	16341.5
M0R402	M0R402	M0R402_RAT	Tmx3	Thioredoxin-related transmembrane protein 3	1	LEPIWNEVGLEMK	LEPIWNEVGLEMK	2	LEPIWNEVGLEMK2	37832.4	44971.3	37202
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	LEPLGSYR	LEPLGSYR	2	LEPLGSYR2	1.0263e+06	944698	1.05245e+06
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	LEPLGTELHK	LEPLGTELHK	2	LEPLGTELHK2	3.44337e+07	3.03145e+07	3.15596e+07
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	LEPLGTELHKNAK	LEPLGTELHKNAK	3	LEPLGTELHKNAK3	11518.9		13309.7
Q5U2N3	Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	1	LEPLLAPK	LEPLLAPK	2	LEPLLAPK2	21470.6	19145	27537.4
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	LEPLLER	LEPLLER	2	LEPLLER2	152259	131544	151120
Q3MHU5	Q3MHU5	RETR2_RAT	Retreg2	Reticulophagy regulator 2	1	LEPLLMQLDYSMK	LEPLLMQLDYSMK	2	LEPLLMQLDYSMK2	14305.4	9472.16	7698.6
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	LEPMIAPDLDLK	LEPMIAPDLDLK	2	LEPMIAPDLDLK2	76872.8	121644	104722
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	LEPNAQAQMYR	LEPNAQAQMYR	2	LEPNAQAQMYR2	82402	80281.3	102297
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	LEPNLQAQMYR	LEPNLQAQMYR	2	LEPNLQAQMYR2	23497.6	21704.9	49683.2
Q6UPR8	Q6UPR8	ERMP1_RAT	Ermp1	Endoplasmic reticulum metallopeptidase 1	1	LEPQDGAK	LEPQDGAK	1	LEPQDGAK1			2326.33
G3V7L1	G3V7L1;P11530	UTRN_RAT	Utrn	Utrophin	0	LEPQSMVWLPVLHR	LEPQSMVWLPVLHR	2	LEPQSMVWLPVLHR2	19643.6	28479	21775.4
G3V7L1	G3V7L1;P11530	UTRN_RAT	Utrn	Utrophin	0	LEPQSMVWLPVLHR	LEPQSMVWLPVLHR	3	LEPQSMVWLPVLHR3	299652	320713	387355
D4A6U4	D4A6U4	D4A6U4_RAT	Tecpr2	Tectonin beta-propeller repeat containing 2	1	LEPSDGGSCSAPEK	LEPSDGGSC(UniMod:4)SAPEK	2	LEPSDGGSC(UniMod:4)SAPEK2	9648.26	9728.13	6144.96
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LEPSKEYLIMGMDGVTSDLK	LEPSKEYLIMGMDGVTSDLK	3	LEPSKEYLIMGMDGVTSDLK3	60912.6	54828.4	53656.2
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	LEPVHNHGELSAI	LEPVHNHGELSAI	2	LEPVHNHGELSAI2	10540.8	13788.6	8240.75
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	LEPVHNHGELSAI	LEPVHNHGELSAI	3	LEPVHNHGELSAI3	41060.2	54492.8	58712.9
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	LEPYMAAK	LEPYMAAK	1	LEPYMAAK1	6281.75	4256.4	
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	LEPYMAAK	LEPYMAAK	2	LEPYMAAK2	889256	947469	851927
F7EYK0	F7EYK0	F7EYK0_RAT	Fkbp5	peptidylprolyl isomerase	1	LEQAAIVK	LEQAAIVK	2	LEQAAIVK2	28350.5	19096.7	25914.4
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	LEQAFSEVSSTETNDK	LEQAFSEVSSTETNDK	2	LEQAFSEVSSTETNDK2	2495.13	1917.18	
B0BNE3	B0BNE3	B0BNE3_RAT	Trappc5	Trafficking protein particle complex subunit 5	1	LEQANDDAR	LEQANDDAR	2	LEQANDDAR2			18803.7
P97924	Q63406;P97924	KALRN_RAT	Kalrn	Kalirin	0	LEQCLQLR	LEQC(UniMod:4)LQLR	2	LEQC(UniMod:4)LQLR2	9456.08	7201.85	11949.9
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	LEQCMASK	LEQC(UniMod:4)MASK	2	LEQC(UniMod:4)MASK2		20725.6	
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	LEQDGTTVQGLLLHHPTPPNPYTMAVAAR	LEQDGTTVQGLLLHHPTPPNPYTMAVAAR	4	LEQDGTTVQGLLLHHPTPPNPYTMAVAAR4	18597.4	9943.59	12698.9
A0A8I5ZR58	A0A8I5ZR58	A0A8I5ZR58_RAT	Cux1-ps1	Protein CASP	1	LEQDLSTIQSIQRPDAEGASEQGLEK	LEQDLSTIQSIQRPDAEGASEQGLEK	3	LEQDLSTIQSIQRPDAEGASEQGLEK3	6894.26	8498.92	11114.2
Q6U6G5	Q6U6G5;D4AA59	ZC3HF_RAT	Zc3h15	Zinc finger CCCH domain-containing protein 15	0	LEQDMER	LEQDMER	2	LEQDMER2	36152	28051.7	31383.3
G3V8E4	G3V8E4	G3V8E4_RAT	Ubfd1	Ubiquitin family domain containing 1	1	LEQDQLWIGTK	LEQDQLWIGTK	2	LEQDQLWIGTK2	2860.46	1227.98	1826.72
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LEQDQTTAQLQVQK	LEQDQTTAQLQVQK	2	LEQDQTTAQLQVQK2	12441.4	7974.56	7161.25
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LEQDQTTAQLQVQK	LEQDQTTAQLQVQK	3	LEQDQTTAQLQVQK3	2853.66	3589.25	2965.43
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	LEQEEAELEEFLCPVK	LEQEEAELEEFLC(UniMod:4)PVK	3	LEQEEAELEEFLC(UniMod:4)PVK3	4048.92	8504.28	2757.33
P31721	P31721	C1QB_RAT	C1qb	Complement C1q subcomponent subunit B	1	LEQEEVVHLQATDK	LEQEEVVHLQATDK	3	LEQEEVVHLQATDK3	15684.2	16625.7	11010.5
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	LEQEEYQGEGISWHNIDYTDNVGCIHLISK	LEQEEYQGEGISWHNIDYTDNVGC(UniMod:4)IHLISK	4	LEQEEYQGEGISWHNIDYTDNVGC(UniMod:4)IHLISK4	4427.98	2891.66	2331.86
Q6IFU8	Q6IFV1;P25030;Q63279;Q6IFV4;D4AC62;Q6IFU7;Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	0	LEQEIATYR	LEQEIATYR	2	LEQEIATYR2	72238	73516.6	38558.5
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	LEQELFSGGNTGINFEK	LEQELFSGGNTGINFEK	2	LEQELFSGGNTGINFEK2	24649.3	27141.2	15431.1
G3V9L1	G3V9L1	G3V9L1_RAT	Tex2	Testis expressed 2	1	LEQELQK	LEQELQK	2	LEQELQK2	8194.64	19798.8	13459
A0A8I5Y656	A0A8I5Y656;A0A8I6G9C0	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	0	LEQENDDLAHELVTSK	LEQENDDLAHELVTSK	2	LEQENDDLAHELVTSK2	10425.8	12524.3	4524.81
A0A8I5Y656	A0A8I5Y656;A0A8I6G9C0	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	0	LEQENDDLAHELVTSK	LEQENDDLAHELVTSK	3	LEQENDDLAHELVTSK3	40497	37437.7	35828
P21263	P21263	NEST_RAT	Nes	Nestin	1	LEQETQQTLR	LEQETQQTLR	2	LEQETQQTLR2	647.104	2488.67	6883.16
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	LEQEVNEHK	LEQEVNEHK	2	LEQEVNEHK2			27760.2
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	LEQFVSILMESIPPR	LEQFVSILMESIPPR	2	LEQFVSILMESIPPR2	7637.75	4526.51	5969.21
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	LEQFVSILMESIPPR	LEQFVSILMESIPPR	3	LEQFVSILMESIPPR3	41748.6	33931.1	33293.6
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	LEQGFELQFR	LEQGFELQFR	2	LEQGFELQFR2	11501.3		
P07335	P07335	KCRB_RAT	Ckb	Creatine kinase B-type	1	LEQGQPIDDLMPAQK	LEQGQPIDDLMPAQK	2	LEQGQPIDDLMPAQK2	273249	218666	250107
P07335	P07335	KCRB_RAT	Ckb	Creatine kinase B-type	1	LEQGQPIDDLMPAQK	LEQGQPIDDLMPAQK	3	LEQGQPIDDLMPAQK3	32835.3	18854.2	28817.1
Q5PQX1	Q5PQX1	TOIP1_RAT	Tor1aip1	Torsin-1A-interacting protein 1	1	LEQHSQQAQQQLSPATSGR	LEQHSQQAQQQLSPATSGR	3	LEQHSQQAQQQLSPATSGR3	15033.4	12641	14100.8
D3ZYR1	D3ZYR1	FCHO2_RAT	Fcho2	F-BAR domain only protein 2	1	LEQILPNSQLVFSDPSQCDSNTK	LEQILPNSQLVFSDPSQC(UniMod:4)DSNTK	3	LEQILPNSQLVFSDPSQC(UniMod:4)DSNTK3	8408.72	5934.86	8519.08
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	LEQLCQAGGQCIDKDHSHYCVCPEGR	LEQLC(UniMod:4)QAGGQC(UniMod:4)IDKDHSHYC(UniMod:4)VC(UniMod:4)PEGR	4	LEQLC(UniMod:4)QAGGQC(UniMod:4)IDKDHSHYC(UniMod:4)VC(UniMod:4)PEGR4	7612.65	5957.05	5812.21
Q5U4F3	Q5U4F3	F107B_RAT	Fam107b	Protein FAM107B	1	LEQLELEK	LEQLELEK	2	LEQLELEK2	34023.4	23034.9	40334.1
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	LEQLGAQR	LEQLGAQR	2	LEQLGAQR2	72866.7	63529.4	73189.9
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	LEQLGIPR	LEQLGIPR	2	LEQLGIPR2	305121	273342	273212
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	LEQLHIMQEQQR	LEQLHIMQEQQR	2	LEQLHIMQEQQR2	2317.57	1627.66	4318.43
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	LEQLHIMQEQQR	LEQLHIMQEQQR	3	LEQLHIMQEQQR3	13745.8	12126.6	8771.75
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	LEQLKPR	LEQLKPR	2	LEQLKPR2	156713	149352	118153
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	LEQLLLDGPWR	LEQLLLDGPWR	2	LEQLLLDGPWR2	25240.6	28487.5	22596.4
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	LEQLLQALHADSQASR	LEQLLQALHADSQASR	2	LEQLLQALHADSQASR2	8814.12	6715.91	
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	LEQLLQALHADSQASR	LEQLLQALHADSQASR	3	LEQLLQALHADSQASR3	238712	245231	255055
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	LEQLNQYPDFNNYLIFVLTK	LEQLNQYPDFNNYLIFVLTK	3	LEQLNQYPDFNNYLIFVLTK3	3899.51		
A0A0G2K1N9	A0A0G2K1N9	A0A0G2K1N9_RAT	Selenoo	Selenoprotein O	1	LEQLSPSELQSK	LEQLSPSELQSK	2	LEQLSPSELQSK2	13404.9	14793.5	12374
A0A8I6AI94	A0A8I6AI94	A0A8I6AI94_RAT	Dcun1d1	DCN1-like protein	1	LEQLYNR	LEQLYNR	2	LEQLYNR2	33516.9	27032.8	29138
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	LEQNLSFEIK	LEQNLSFEIK	2	LEQNLSFEIK2	97686.1	60500.2	79784.9
B2RYM5	B2RYM5	BRCC3_RAT	Brcc3	Lys-63-specific deubiquitinase BRCC36	1	LEQNQQHLR	LEQNQQHLR	3	LEQNQQHLR3			15589.6
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	LEQNQWK	LEQNQWK	1	LEQNQWK1	10180.7	14308.3	10481.7
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	LEQNQWK	LEQNQWK	2	LEQNQWK2	1.16843e+06	1.19438e+06	1.23174e+06
A0A0G2K3L8	A0A0G2K3L8	A0A0G2K3L8_RAT	Wdfy1	WD repeat and FYVE domain containing 1	1	LEQNSCSVITTLK	LEQNSC(UniMod:4)SVITTLK	2	LEQNSC(UniMod:4)SVITTLK2	2513.42	5170.32	4145.48
P29826	P29826	HB2B_RAT	RT1-Bb	Rano class II histocompatibility antigen, B-1 beta chain	1	LEQPNVAISLSR	LEQPNVAISLSR	2	LEQPNVAISLSR2	10443.9	4435.07	9878.08
A0A8I6GDP5	A0A8I6GDP5	A0A8I6GDP5_RAT	Tjap1	Tight junction associated protein 1	1	LEQQEPLTDAER	LEQQEPLTDAER	2	LEQQEPLTDAER2	208099		
D3ZHR2	D3ZHR2	ABCD1_RAT	Abcd1	ATP-binding cassette sub-family D member 1	1	LEQQLAGIPK	LEQQLAGIPK	2	LEQQLAGIPK2	7502.06	5847.8	3574.16
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	LEQQLAK	LEQQLAK	1	LEQQLAK1	10275.8	11869.4	4558.47
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	LEQQLAK	LEQQLAK	2	LEQQLAK2	717855	771715	772817
A0A8I6G4R8	A0A8I6G4R8	A0A8I6G4R8_RAT	Hdac5	Histone deacetylase	1	LEQQLLILR	LEQQLLILR	2	LEQQLLILR2	5795.25	5239.18	2978.57
Q29RW1	P02563;Q29RW1	MYH4_RAT	Myh4	Myosin-4	0	LEQQVDDLEGSLEQEK	LEQQVDDLEGSLEQEK	2	LEQQVDDLEGSLEQEK2	1725.93	3148.72	2359.36
Q29RW1	P02563;Q29RW1	MYH4_RAT	Myh4	Myosin-4	0	LEQQVDDLEGSLEQEKK	LEQQVDDLEGSLEQEKK	3	LEQQVDDLEGSLEQEKK3	2486.49	1921.41	5320
P21531	P21531	RL3_RAT	Rpl3	Large ribosomal subunit protein uL3	1	LEQQVPVNQVFGQDEMIDVIGVTK	LEQQVPVNQVFGQDEMIDVIGVTK	3	LEQQVPVNQVFGQDEMIDVIGVTK3			3527.4
A0A8I5ZUS1	A0A8I5ZUS1	A0A8I5ZUS1_RAT	Map3k4	Mitogen activated protein kinase kinase kinase 4	1	LEQRPAGEPSLLSIK	LEQRPAGEPSLLSIK	3	LEQRPAGEPSLLSIK3	4687.43	8798	6372.7
F7EUU4	F7EUU4	F7EUU4_RAT	Cops5	COP9 signalosome subunit 5	1	LEQSEAQLGR	LEQSEAQLGR	2	LEQSEAQLGR2	136614	128188	139678
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	LEQSNIVK	LEQSNIVK	2	LEQSNIVK2	33742.6	28819.1	34978.6
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	LEQTPMPNMFGNGPLK	LEQTPMPNMFGNGPLK	2	LEQTPMPNMFGNGPLK2	6466.71	7518.55	8657.17
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	LEQTPMPNMFGNGPLKK	LEQTPMPNMFGNGPLKK	3	LEQTPMPNMFGNGPLKK3	14917	11208.8	13507.1
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	LEQVESGLHR	LEQVESGLHR	3	LEQVESGLHR3	4382.12	7510.74	5154.04
Q68FX0	Q68FX0	IDH3B_RAT	Idh3B	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	LEQVLSSMK	LEQVLSSMK	2	LEQVLSSMK2	84603	76748.3	91905.1
Q68FX0	Q68FX0	IDH3B_RAT	Idh3B	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	LEQVLSSMKENK	LEQVLSSMKENK	3	LEQVLSSMKENK3		3289.3	2551.85
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	LEQYTNAIEGTK	LEQYTNAIEGTK	2	LEQYTNAIEGTK2	268118	233192	260597
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	LERENAEVDGDDDAEEMEAK	LERENAEVDGDDDAEEMEAK	3	LERENAEVDGDDDAEEMEAK3	58685.4	61674.6	55163.8
Q9Z1P2	Q9QXQ0;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	LERLDHLAEK	LERLDHLAEK	3	LERLDHLAEK3	2907.46	5642.76	8936.64
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	LERPLDFEQR	LERPLDFEQR	3	LERPLDFEQR3	42923.8	31128.7	29708.8
F7FMS0	F7FMS0	F7FMS0_RAT	Mst1	Macrophage stimulating 1	1	LERPVILNHHVAR	LERPVILNHHVAR	4	LERPVILNHHVAR4	14284	10062.1	17114.7
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	LESAGLGYR	LESAGLGYR	2	LESAGLGYR2	18644.5	25240.6	13109.4
G3V8G1	G3V8G1	G3V8G1_RAT	Agtpbp1	tubulin-glutamate carboxypeptidase	1	LESAHNPQQIYFR	LESAHNPQQIYFR	3	LESAHNPQQIYFR3	2402.77	3413.44	
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	LESDISAQTEYCHTPCTVNCNIPVVSGK	LESDISAQTEYC(UniMod:4)HTPC(UniMod:4)TVNC(UniMod:4)NIPVVSGK	4	LESDISAQTEYC(UniMod:4)HTPC(UniMod:4)TVNC(UniMod:4)NIPVVSGK4	1.54417e+06	1.58787e+06	1.6934e+06
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	LESDYTSFLETK	LESDYTSFLETK	2	LESDYTSFLETK2	120606	106627	119485
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	LESEEDVSQAFLEAVAEEKPHVK	LESEEDVSQAFLEAVAEEKPHVK	4	LESEEDVSQAFLEAVAEEKPHVK4	30077.7	32635.3	27628
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	LESEEDVSQAFLEAVAEEKPHVKPYFSK	LESEEDVSQAFLEAVAEEKPHVKPYFSK	4	LESEEDVSQAFLEAVAEEKPHVKPYFSK4	42029.8	46915.1	52175.7
A0A0G2JU49	A0A0G2JU49	A0A0G2JU49_RAT	Mtx1	Metaxin 1	1	LESEEELEK	LESEEELEK	2	LESEEELEK2	37270.2	31588.6	37135.9
A0A0G2JU49	A0A0G2JU49	A0A0G2JU49_RAT	Mtx1	Metaxin 1	1	LESEEELEKELYQEAR	LESEEELEKELYQEAR	3	LESEEELEKELYQEAR3	14479.9	12433.1	15480.9
P01026	P01026	CO3_RAT	C3	Complement C3	1	LESEETFILEAHDAQGDVPVTVTVQDFLK	LESEETFILEAHDAQGDVPVTVTVQDFLK	4	LESEETFILEAHDAQGDVPVTVTVQDFLK4	29565.5	35209.2	27130.3
P01026	P01026	CO3_RAT	C3	Complement C3	1	LESEETFILEAHDAQGDVPVTVTVQDFLKK	LESEETFILEAHDAQGDVPVTVTVQDFLKK	4	LESEETFILEAHDAQGDVPVTVTVQDFLKK4	71298.9	68849.8	74060.7
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	LESEGDSLLR	LESEGDSLLR	2	LESEGDSLLR2	23401.1	15221.8	19311.6
D4ABI7	D4ABI7	D4ABI7_RAT	Hacd3	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase	1	LESEGSPETLTNLK	LESEGSPETLTNLK	2	LESEGSPETLTNLK2	4838.42	4673.83	5511.57
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LESEHPDQAQAILSR	LESEHPDQAQAILSR	2	LESEHPDQAQAILSR2	113435	109774	96749.8
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LESEHPDQAQAILSR	LESEHPDQAQAILSR	3	LESEHPDQAQAILSR3	985054	1.11481e+06	1.1215e+06
A0A8I6A5W7	A0A8I6A5W7	A0A8I6A5W7_RAT	Ccdc88a	Coiled coil domain containing 88A	1	LESELCR	LESELC(UniMod:4)R	2	LESELC(UniMod:4)R2	9666.67	14204.6	15981.6
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	LESELGHWR	LESELGHWR	2	LESELGHWR2	4232.56		
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	LESEMDILK	LESEMDILK	2	LESEMDILK2	1928.33		1605.73
M0R915	M0R915;A0A8I6GLQ4	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	0	LESFEDWPFYAHGTSPR	LESFEDWPFYAHGTSPR	3	LESFEDWPFYAHGTSPR3	10223.2	16749.6	15933.8
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	LESFESLR	LESFESLR	2	LESFESLR2	255402	274503	257279
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	LESFESLRGER	LESFESLRGER	3	LESFESLRGER3	172663	211998	199123
Q9QZA6	Q9QZA6	CD151_RAT	Cd151	CD151 antigen	1	LESFIQEHLR	LESFIQEHLR	2	LESFIQEHLR2	28259.8	13045.3	6283
Q9QZA6	Q9QZA6	CD151_RAT	Cd151	CD151 antigen	1	LESFIQEHLR	LESFIQEHLR	3	LESFIQEHLR3	63694.3	123097	154810
A0A0U1RS29	A0A0U1RS29	A0A0U1RS29_RAT	Rgl2	Ral guanine nucleotide dissociation stimulator-like 2	1	LESFLLR	LESFLLR	2	LESFLLR2	14430.8	14756.6	14517.8
Q5XIJ6	Q5XIJ6	BABA1_RAT	Babam1	BRISC and BRCA1-A complex member 1	1	LESFNGSR	LESFNGSR	2	LESFNGSR2	70550	77557.3	92823.1
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	LESFSACIWVK	LESFSAC(UniMod:4)IWVK	2	LESFSAC(UniMod:4)IWVK2	55231.2	29709.7	28102.4
Q1H5H1	Q1H5H1	SELT_RAT	Selenot	Thioredoxin reductase-like selenoprotein T	1	LESGHLPSMQQLVQILDNEMK	LESGHLPSMQQLVQILDNEMK	3	LESGHLPSMQQLVQILDNEMK3	9624.53	13528.8	21842.7
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	LESGLTALTPSVK	LESGLTALTPSVK	2	LESGLTALTPSVK2	1876.23	3692.48	2225.39
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	LESGSICK	LESGSIC(UniMod:4)K	2	LESGSIC(UniMod:4)K2	557630	447210	310298
A0A8I5Y9R1	D3ZE08;A0A8I5Y9R1	A0A8I5Y9R1_RAT	ENSRNOG00000066814	Ig-like domain-containing protein	0	LESGVPNR	LESGVPNR	2	LESGVPNR2	386072	316130	344978
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	LESHSVPCSSSTQLDFTDPLLAK	LESHSVPC(UniMod:4)SSSTQLDFTDPLLAK	3	LESHSVPC(UniMod:4)SSSTQLDFTDPLLAK3	15966.2	23832.7	16968.6
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	LESIADMK	LESIADMK	2	LESIADMK2	69096.2	65577.8	63739.3
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	LESIATTLVSYK	LESIATTLVSYK	2	LESIATTLVSYK2	8426.86	7790.09	7439.63
M0R4Z8	M0R4Z8	M0R4Z8_RAT	Gatd1	Glutamine amidotransferase like class 1 domain containing 1	1	LESIDGAR	LESIDGAR	2	LESIDGAR2	24202.8		31627.7
Q5XIC4	Q5XIC4	SPG21_RAT	Spg21	Maspardin	1	LESLGQSELASR	LESLGQSELASR	2	LESLGQSELASR2	10473.5	12844.5	7627.31
F7FHP0	F7FHP0	F7FHP0_RAT	Angptl3	Angiopoietin-like 3	1	LESLLEEK	LESLLEEK	2	LESLLEEK2	336311	266388	303212
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	LESLNIQR	LESLNIQR	2	LESLNIQR2	287806	307867	274000
Q6AYI5	Q6AYI5	SHOC2_RAT	Shoc2	Leucine-rich repeat protein SHOC-2	1	LESLPNEIAYLK	LESLPNEIAYLK	2	LESLPNEIAYLK2	21384.3	30222.7	22910.5
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	LESLPPQMR	LESLPPQMR	2	LESLPPQMR2	17393.1	18173.2	23017.5
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	LESLPVAVFSLQK	LESLPVAVFSLQK	2	LESLPVAVFSLQK2	33160.7	35040.4	43514.2
G3V7P2	G3V7P2	G3V7P2_RAT	Fgl2	Fibrinogen-like 2	1	LESLQLVNMNNIENYVDNK	LESLQLVNMNNIENYVDNK	3	LESLQLVNMNNIENYVDNK3	901733	992647	903413
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	LESMNDVEELTTLLR	LESMNDVEELTTLLR	2	LESMNDVEELTTLLR2	20418.6	36385.8	26790.2
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	LESMNDVEELTTLLR	LESMNDVEELTTLLR	3	LESMNDVEELTTLLR3	5687.84	30419.1	8026.43
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LESPADVK	LESPADVK	2	LESPADVK2	201013	228559	188276
Q6AY23	Q6AY23	P5CR2_RAT	Pycr2	Pyrroline-5-carboxylate reductase 2	1	LESPTVSTLAPPSSGK	LESPTVSTLAPPSSGK	2	LESPTVSTLAPPSSGK2	35182	30480.4	30870.3
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	LESQQLR	LESQQLR	2	LESQQLR2	15481.1	11057.8	11027
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	LESQYLTSSLR	LESQYLTSSLR	2	LESQYLTSSLR2	17610.8	18126.8	13664.4
P83565	A0A8I5ZP13;P83565	RM40_RAT	Mrpl40	Large ribosomal subunit protein mL40	0	LESTELYAEAIK	LESTELYAEAIK	2	LESTELYAEAIK2	2362.41		4833.82
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	LESTLNYGMER	LESTLNYGMER	2	LESTLNYGMER2	81174.8	82602.9	97117.6
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	LESTMSLVK	LESTMSLVK	2	LESTMSLVK2	24367.4	28728	32732.9
A0A8I5Y4X4	A0A8I5Y4X4	A0A8I5Y4X4_RAT	Nub1	Negative regulator of ubiquitin-like proteins 1	1	LESVNTLR	LESVNTLR	2	LESVNTLR2	30620.6	32231.8	43677.6
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	LESVSEDPTQLAEIEK	LESVSEDPTQLAEIEK	2	LESVSEDPTQLAEIEK2	8941.38	15237	
A0A8I5ZU57	A0A8I5ZU57	A0A8I5ZU57_RAT	Ccny	Cyclin Y	1	LESYRPDTDLSR	LESYRPDTDLSR	3	LESYRPDTDLSR3	28439	35482	39608.6
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	LETADLR	LETADLR	2	LETADLR2	34155.3	32422.8	33600.2
D4ABB8	D4ABB8	ATP9B_RAT	Atp9b	Probable phospholipid-transporting ATPase IIB	1	LETATCIAK	LETATC(UniMod:4)IAK	2	LETATC(UniMod:4)IAK2	15646.6	16032.4	11182.5
Q9Z2L0	Q9Z2L0;A0A8I6GHL9	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	0	LETAVNLAWTAGNSNTR	LETAVNLAWTAGNSNTR	2	LETAVNLAWTAGNSNTR2	166545	147025	138710
Q9Z2L0	Q9Z2L0;A0A8I6GHL9	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	0	LETAVNLAWTAGNSNTR	LETAVNLAWTAGNSNTR	3	LETAVNLAWTAGNSNTR3	152886	128709	149707
Q8R553	Q8R553	CSTN3_RAT	Clstn3	Calsyntenin-3	1	LETCDEPLWNIQATIELQTSHVAK	LETC(UniMod:4)DEPLWNIQATIELQTSHVAK	3	LETC(UniMod:4)DEPLWNIQATIELQTSHVAK3	3488.88	4607.13	
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	LETDAHWVPVSWLHS	LETDAHWVPVSWLHS	3	LETDAHWVPVSWLHS3	14659.2	16835.7	23207.9
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	LETEFQR	LETEFQR	2	LETEFQR2	1.97282e+06	1.79781e+06	1.92129e+06
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	LETEIER	LETEIER	2	LETEIER2	72165.9	62576.3	78897.9
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	LETEILNK	LETEILNK	1	LETEILNK1	3117.14	3516.09	2442.31
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	LETEILNK	LETEILNK	2	LETEILNK2	288883	347110	288970
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	LETELGRPSER	LETELGRPSER	3	LETELGRPSER3	38719.1	34433.3	39872.5
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	LETEYVK	LETEYVK	2	LETEYVK2	119333	159626	162368
Q498R3	Q498R3	DJC10_RAT	Dnajc10	DnaJ homolog subfamily C member 10	1	LETFQSQVK	LETFQSQVK	2	LETFQSQVK2	18698.6	10419.6	16474.2
Q32Q06	Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	1	LETGAPRPPATVTNAVSWR	LETGAPRPPATVTNAVSWR	3	LETGAPRPPATVTNAVSWR3	288732	297527	282884
Q6MG51	Q6MG51	CF047_RAT	G4	Uncharacterized protein C6orf47 homolog	1	LETGGAVPK	LETGGAVPK	2	LETGGAVPK2	37306.9	43705.3	39453.1
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	LETGQFLTFR	LETGQFLTFR	2	LETGQFLTFR2	29627.1	34493.3	26703.2
A0A8I6GL10	A0A8I6GL10	A0A8I6GL10_RAT	Uchl5	Ubiquitin carboxyl-terminal hydrolase	1	LETIFFAK	LETIFFAK	2	LETIFFAK2	10831.8	11108.4	16579.4
Q498S0	Q498S0	Q498S0_RAT	Chst12	Carbohydrate sulfotransferase	1	LETLDEDAAQLLR	LETLDEDAAQLLR	2	LETLDEDAAQLLR2	32123.1	42822.2	54802.2
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	LETLDLSHNHLQSLPSLGR	LETLDLSHNHLQSLPSLGR	3	LETLDLSHNHLQSLPSLGR3	2.88486e+06	2.76333e+06	2.64778e+06
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	LETLDLSHNHLQSLPSLGR	LETLDLSHNHLQSLPSLGR	4	LETLDLSHNHLQSLPSLGR4	1.25481e+07	1.39784e+07	1.37458e+07
D3ZMI6	D3ZMI6	D3ZMI6_RAT	Olfm4	Olfactomedin 4	1	LETLDQNNVLSIR	LETLDQNNVLSIR	2	LETLDQNNVLSIR2	63087.1	81060.6	67188.2
D3ZMI6	D3ZMI6	D3ZMI6_RAT	Olfm4	Olfactomedin 4	1	LETLDQNNVLSIRR	LETLDQNNVLSIRR	3	LETLDQNNVLSIRR3		10036.7	6754.63
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	LETLEENSK	LETLEENSK	2	LETLEENSK2	17929.4	22646.1	19412.3
A0A8I6A5W7	A0A8I6A5W7	A0A8I6A5W7_RAT	Ccdc88a	Coiled coil domain containing 88A	1	LETLEQENSELERENR	LETLEQENSELERENR	3	LETLEQENSELERENR3	2839.48	2831.82	4176.34
Q5U2R0	Q5U2R0	MAT2B_RAT	Mat2b	Methionine adenosyltransferase 2 subunit beta	1	LETLGIGQR	LETLGIGQR	2	LETLGIGQR2	53468.6	41795.6	35066.4
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	LETLPEEMGDMQK	LETLPEEMGDMQK	2	LETLPEEMGDMQK2	839801	799941	836208
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	LETLPEEMGDMQK	LETLPEEMGDMQK	3	LETLPEEMGDMQK3	21907.3	28273	29380.6
Q5FVI3	Q5FVI3	LRC57_RAT	Lrrc57	Leucine-rich repeat-containing protein 57	1	LETLSLNNNHLR	LETLSLNNNHLR	3	LETLSLNNNHLR3	28867.1	15022.3	9983.42
A0FKI7	A0FKI7;A0A8I5Y5I3	ACBD5_RAT	Acbd5	Acyl-CoA-binding domain-containing protein 5	0	LETLTASQAK	LETLTASQAK	2	LETLTASQAK2	9374.46	7789.99	14899.7
Q811U3	Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	1	LETLTNQFSDSK	LETLTNQFSDSK	2	LETLTNQFSDSK2	17140.8	5827.34	10673.4
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LETMNQCWESVLQK	LETMNQC(UniMod:4)WESVLQK	2	LETMNQC(UniMod:4)WESVLQK2	8203.81	7210.55	6902.97
E9PU10	E9PU10	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	1	LETPLEDIK	LETPLEDIK	2	LETPLEDIK2	114466	106317	110580
E9PU10	E9PU10	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	1	LETPLEDIKGQLK	LETPLEDIKGQLK	3	LETPLEDIKGQLK3	32492.6	52230.2	44056.1
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LETQYCK	LETQYC(UniMod:4)K	2	LETQYC(UniMod:4)K2	49635.9	62553.9	60218.1
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	LETRPGPGGAPVPELVIAGELDR	LETRPGPGGAPVPELVIAGELDR	3	LETRPGPGGAPVPELVIAGELDR3	12353.9	4659.11	9899.82
Q9WUD2	Q9WUD2	TRPV2_RAT	Trpv2	Transient receptor potential cation channel subfamily V member 2	1	LETSDGDEEGNAEVNK	LETSDGDEEGNAEVNK	2	LETSDGDEEGNAEVNK2	6731.98	5300.1	2566.92
Q9WUD2	Q9WUD2	TRPV2_RAT	Trpv2	Transient receptor potential cation channel subfamily V member 2	1	LETSDGDEEGNAEVNKGK	LETSDGDEEGNAEVNKGK	3	LETSDGDEEGNAEVNKGK3	8358.5	7225.48	7842.58
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	LETSFLVHAWDSSYR	LETSFLVHAWDSSYR	3	LETSFLVHAWDSSYR3	8526.43		5701.39
D3ZQQ1	D3ZQQ1	D3ZQQ1_RAT	Aftph	Aftiphilin	1	LETSTSSLR	LETSTSSLR	2	LETSTSSLR2	23831.7	30465.1	7181.82
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	LETTESQLPIYTPLTHHGEMTGHFR	LETTESQLPIYTPLTHHGEMTGHFR	4	LETTESQLPIYTPLTHHGEMTGHFR4	42152	53368.2	27283.3
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	LETTLLEELPAYK	LETTLLEELPAYK	2	LETTLLEELPAYK2	33495.4	42298.8	33894.3
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	LETTLLEELPAYK	LETTLLEELPAYK	3	LETTLLEELPAYK3	7069.86	12280.5	8743.28
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	LETTLLEELPAYKR	LETTLLEELPAYKR	3	LETTLLEELPAYKR3	8407.54	11321.8	18808.1
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	LETTLLSELPAHK	LETTLLSELPAHK	2	LETTLLSELPAHK2	8871.46	5509.16	10059.1
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	LETTLLSELPAHK	LETTLLSELPAHK	3	LETTLLSELPAHK3	116060	110314	113885
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	LETTLLSELPAHKR	LETTLLSELPAHKR	3	LETTLLSELPAHKR3	3012.79	7270.57	6236.84
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	LETTLLSELPAHKR	LETTLLSELPAHKR	4	LETTLLSELPAHKR4	7615.72	15882.6	14685.2
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	LETTSNQDNLAPITAK	LETTSNQDNLAPITAK	2	LETTSNQDNLAPITAK2	182296	186422	174110
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	LETTSNQDNLAPITAK	LETTSNQDNLAPITAK	3	LETTSNQDNLAPITAK3	6593.96	10873	16168.1
F1M8V2	F1M8V2	F1M8V2_RAT	Ube4b	Ubiquitin conjugation factor E4	1	LETVDPTYIFHPR	LETVDPTYIFHPR	3	LETVDPTYIFHPR3	13484.1	22323.9	29451.7
D3ZIN7	D3ZIN7	D3ZIN7_RAT	Mrps23	Mitochondrial ribosomal protein S23	1	LETVGSVFSR	LETVGSVFSR	2	LETVGSVFSR2	7007.64	5620.64	11903.2
Q5XI83	Q5XI83	VP35L_RAT	Vps35l	VPS35 endosomal protein-sorting factor-like	1	LETVPLECGDYHPLKPITVTESK	LETVPLEC(UniMod:4)GDYHPLKPITVTESK	4	LETVPLEC(UniMod:4)GDYHPLKPITVTESK4	8596.17	6760.74	8714.97
Q7TP21	Q7TP21	Q7TP21_RAT	Rpa1	Replication protein A subunit	1	LETYNDESR	LETYNDESR	2	LETYNDESR2	5114.4	4420.89	7206.54
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	LEVAEVNGR	LEVAEVNGR	2	LEVAEVNGR2	8993.22	4747.98	6715.81
F1MAR6	F1MAR6	F1MAR6_RAT	Prodh	Proline dehydrogenase	1	LEVAVLQESIAK	LEVAVLQESIAK	2	LEVAVLQESIAK2		3416.4	5432.18
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	LEVDIDIK	LEVDIDIK	1	LEVDIDIK1	4663.42	604.897	2763.98
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	LEVDIDIK	LEVDIDIK	2	LEVDIDIK2	854883	481620	481668
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	LEVDIPLVK	LEVDIPLVK	2	LEVDIPLVK2	37270	33124.6	33678.7
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	LEVDLGCALNEK	LEVDLGC(UniMod:4)ALNEK	2	LEVDLGC(UniMod:4)ALNEK2	12978	16496.6	17740.8
A0A8I5ZU93	A0A8I5ZU93	A0A8I5ZU93_RAT	Cops7a	COP9 signalosome subunit 7A	1	LEVDYSIGR	LEVDYSIGR	2	LEVDYSIGR2	55791.6	49593.3	37533.9
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	LEVEANNAFDQYR	LEVEANNAFDQYR	2	LEVEANNAFDQYR2	20377.4	17021	21857.1
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	LEVEANNAFDQYR	LEVEANNAFDQYR	3	LEVEANNAFDQYR3	6617.58		8811.5
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LEVETVIK	LEVETVIK	2	LEVETVIK2	247896	226402	217959
O35254	O35254	GORS1_RAT	Gorasp1	Golgi reassembly-stacking protein 1	1	LEVFNMK	LEVFNMK	2	LEVFNMK2	75387.8	69419.1	45344.1
A0A8I6ASK6	A0A8I6ASK6	A0A8I6ASK6_RAT	Fcrl1	Fc receptor-like 1	1	LEVFYQGQWSTVCK	LEVFYQGQWSTVC(UniMod:4)K	2	LEVFYQGQWSTVC(UniMod:4)K2	538351	495156	555583
A0A8I6ASK6	A0A8I6ASK6	A0A8I6ASK6_RAT	Fcrl1	Fc receptor-like 1	1	LEVFYQGQWSTVCK	LEVFYQGQWSTVC(UniMod:4)K	3	LEVFYQGQWSTVC(UniMod:4)K3	67937.2	64064.3	60745.5
A0A0G2K6T9	A0A0G2K6T9	A0A0G2K6T9_RAT	Pcdh1	Protocadherin 1	1	LEVGAPYLR	LEVGAPYLR	2	LEVGAPYLR2	66740.8	76670.4	58904
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	LEVGEVR	LEVGEVR	2	LEVGEVR2	54047.3	54367.4	33287.4
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	LEVGIQAMEHLIHVLQTDR	LEVGIQAMEHLIHVLQTDR	4	LEVGIQAMEHLIHVLQTDR4	12034.8	4864.6	6172.63
P17425	P22791;P17425	HMCS1_RAT	Hmgcs1	Hydroxymethylglutaryl-CoA synthase, cytoplasmic	0	LEVGTETIIDK	LEVGTETIIDK	2	LEVGTETIIDK2	10576.9	11730.9	11287.7
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	LEVIDETVLVTYSK	LEVIDETVLVTYSK	2	LEVIDETVLVTYSK2	11982.9	9629.87	10035.4
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	LEVIELPHPPQNLLASLSSAR	LEVIELPHPPQNLLASLSSAR	3	LEVIELPHPPQNLLASLSSAR3	9135.99	19853.2	17872
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	LEVLLANVSR	LEVLLANVSR	2	LEVLLANVSR2	10363.7	8917.7	5649.8
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	LEVMGNQLQACSK	LEVMGNQLQAC(UniMod:4)SK	2	LEVMGNQLQAC(UniMod:4)SK2	103998	101116	111338
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	LEVNEAELLR	LEVNEAELLR	2	LEVNEAELLR2	423650	401822	466042
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	LEVNEAELLRR	LEVNEAELLRR	3	LEVNEAELLRR3	70561.3	82078.6	78192.2
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LEVNLQAMK	LEVNLQAMK	2	LEVNLQAMK2	6.79009e+06	7.54917e+06	6.6373e+06
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	LEVNPER	LEVNPER	2	LEVNPER2	43761.7	49286.9	35998.8
F7EWF8	F7EWF8	F7EWF8_RAT	Anapc2	Anaphase-promoting complex subunit 2	1	LEVPEDIR	LEVPEDIR	2	LEVPEDIR2	34012.8	20663.4	18885.5
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	LEVPLEDVR	LEVPLEDVR	2	LEVPLEDVR2	2.20691e+07	2.07169e+07	2.178e+07
P08649	P08649	CO4_RAT	C4	Complement C4	1	LEVPLKDVR	LEVPLKDVR	2	LEVPLKDVR2	8.31696e+06	8.78581e+06	7.66604e+06
F1LW90	F1LW90	F1LW90_RAT	Fam184a	Family with sequence similarity 184, member A	1	LEVQELLR	LEVQELLR	2	LEVQELLR2		5291.64	
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	LEVSTNGEDWMVYR	LEVSTNGEDWMVYR	2	LEVSTNGEDWMVYR2	22601.9	25301.9	22458.1
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	LEVVTDPMTNTGYVK	LEVVTDPMTNTGYVK	2	LEVVTDPMTNTGYVK2	282614	248574	259490
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	LEVWHGGR	LEVWHGGR	2	LEVWHGGR2	12793.7	16873.1	15728.4
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	LEVWYSGR	LEVWYSGR	2	LEVWYSGR2	26592.5	29391.3	21644.5
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	LEWLSLLPDAEK	LEWLSLLPDAEK	2	LEWLSLLPDAEK2	364966	341906	415002
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	LEWLTLMPDAANLDK	LEWLTLMPDAANLDK	2	LEWLTLMPDAANLDK2	30679.2	56637.3	41020.2
Q4V8C3	A0A0G2K2Z0;D3ZQR6;Q6ED65;Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	0	LEWVYGYR	LEWVYGYR	2	LEWVYGYR2	223937	248145	238115
D3ZES7	D3ZWP6;D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	0	LEYATDVLK	LEYATDVLK	2	LEYATDVLK2	13841.6	7266.83	11694.8
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	LEYCEALAMLR	LEYC(UniMod:4)EALAMLR	2	LEYC(UniMod:4)EALAMLR2	61329.5	54067.5	49483.5
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	LEYDSGSLK	LEYDSGSLK	2	LEYDSGSLK2	13270.1	6875.43	
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	LEYEGLHK	LEYEGLHK	2	LEYEGLHK2	6205.26	8580.63	2877.54
F7EMB2	F7EMB2	F7EMB2_RAT	Rtraf	RNA transcription, translation and transport factor protein	1	LEYGDNAEK	LEYGDNAEK	2	LEYGDNAEK2	16890.2	18369.9	20728.1
A0A8I5ZYD8	A0A8I5ZYD8	A0A8I5ZYD8_RAT	Fhl3	Four and a half LIM domains 3	1	LEYGGQTWHEHCFLCSGCEQPLGSR	LEYGGQTWHEHC(UniMod:4)FLC(UniMod:4)SGC(UniMod:4)EQPLGSR	4	LEYGGQTWHEHC(UniMod:4)FLC(UniMod:4)SGC(UniMod:4)EQPLGSR4	354968	373032	318448
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	LEYLLQFDQK	LEYLLQFDQK	2	LEYLLQFDQK2	146516	140015	142758
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	LEYSILSGNDHK	LEYSILSGNDHK	3	LEYSILSGNDHK3	14868.7	6216	6167.02
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	LFACSNR	LFAC(UniMod:4)SNR	2	LFAC(UniMod:4)SNR2	3.01981e+06	2.9214e+06	3.45097e+06
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	LFADAEEEQR	LFADAEEEQR	2	LFADAEEEQR2	19714.3	11944.9	21798.7
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	LFADAEEEQRR	LFADAEEEQRR	3	LFADAEEEQRR3	98710.4	105473	123796
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	LFADEREIQNAGDQAQENR	LFADEREIQNAGDQAQENR	3	LFADEREIQNAGDQAQENR3	15266	16399.1	21236.7
Q5XIG4	Q5XIG4	OCAD1_RAT	Ociad1	OCIA domain-containing protein 1	1	LFAECHEECFWFR	LFAEC(UniMod:4)HEEC(UniMod:4)FWFR	3	LFAEC(UniMod:4)HEEC(UniMod:4)FWFR3	10517.4	12172.6	16422
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	LFAECHVINPSK	LFAEC(UniMod:4)HVINPSK	2	LFAEC(UniMod:4)HVINPSK2	9560.07	4284.38	11490.2
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	LFAECHVINPSK	LFAEC(UniMod:4)HVINPSK	3	LFAEC(UniMod:4)HVINPSK3	120880	170723	144237
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	LFAECHVINPSKK	LFAEC(UniMod:4)HVINPSKK	3	LFAEC(UniMod:4)HVINPSKK3	16903.5	16429.1	23428.8
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	LFAECHVINPSKK	LFAEC(UniMod:4)HVINPSKK	4	LFAEC(UniMod:4)HVINPSKK4	12983.9	22959.5	10290.6
D4A7D3	D4A7D3	D4A7D3_RAT	Tbk1	TANK-binding kinase 1	1	LFAIEEETTTR	LFAIEEETTTR	2	LFAIEEETTTR2	3690.67	6608.24	4684.25
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	LFAIEIYR	LFAIEIYR	2	LFAIEIYR2	194972	165293	160250
B2RYI0	B2RYI0	WDR91_RAT	Wdr91	WD repeat-containing protein 91	1	LFALQAEVHR	LFALQAEVHR	3	LFALQAEVHR3	20044.7	10067.2	8039.77
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	LFAMEFVK	LFAMEFVK	2	LFAMEFVK2	28935	39516.1	40938.4
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	LFAPIFLQGLSDLK	LFAPIFLQGLSDLK	2	LFAPIFLQGLSDLK2	28252.9	29502.5	21693.1
D3ZGS3	D3ZGS3	OCRL_RAT	Ocrl	Inositol polyphosphate 5-phosphatase OCRL	1	LFAPNSQSGQR	LFAPNSQSGQR	2	LFAPNSQSGQR2	10147.6	4156.23	7844.93
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	LFAQLAGEDAEISAFELQTILR	LFAQLAGEDAEISAFELQTILR	3	LFAQLAGEDAEISAFELQTILR3		44934.4	21493.3
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	LFAQLAGEDAEISAFELQTILRR	LFAQLAGEDAEISAFELQTILRR	3	LFAQLAGEDAEISAFELQTILRR3	22094.5	46210.6	28448.1
D3ZES7	D3ZWP6;D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	0	LFAQLINNK	LFAQLINNK	2	LFAQLINNK2	64935.9	79648.5	78211.5
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	LFAQQCK	LFAQQC(UniMod:4)K	2	LFAQQC(UniMod:4)K2	176661	175249	178736
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	LFASSHMSK	LFASSHMSK	2	LFASSHMSK2	23509.9	18514.4	24040.3
F1LNH3	F1LNH3	F1LNH3_RAT	Col6a2	Collagen type VI alpha 2 chain	1	LFAVAPNR	LFAVAPNR	2	LFAVAPNR2	15345.8	8758.97	8822.47
A0A0G2JVT8	A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	1	LFAVLDFDPYSHIK	LFAVLDFDPYSHIK	3	LFAVLDFDPYSHIK3	1298.86	9653.54	4003.05
A0A0G2JUH8	A0A0G2JUH8	A0A0G2JUH8_RAT	Snx13	Sorting nexin 13	1	LFAVMPDELK	LFAVMPDELK	2	LFAVMPDELK2	8481.47		4686.23
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	LFAWADPTGTR	LFAWADPTGTR	2	LFAWADPTGTR2	28278.1	22394.4	19506.4
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	LFAWADPTGTRK	LFAWADPTGTRK	3	LFAWADPTGTRK3	8880.92	9174.11	5193.59
P04762	P04762	CATA_RAT	Cat	Catalase	1	LFAYPDTHR	LFAYPDTHR	2	LFAYPDTHR2	5246.23	5671.74	4009.34
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	LFCMEPAQVDSLHCEVVPK	LFC(UniMod:4)MEPAQVDSLHC(UniMod:4)EVVPK	3	LFC(UniMod:4)MEPAQVDSLHC(UniMod:4)EVVPK3	593105	618077	677977
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	LFCMEPAQVDSLHCEVVPKEPALVLK	LFC(UniMod:4)MEPAQVDSLHC(UniMod:4)EVVPKEPALVLK	4	LFC(UniMod:4)MEPAQVDSLHC(UniMod:4)EVVPKEPALVLK4	90043.4	118696	131357
D3ZJD8	D3ZJD8	D3ZJD8_RAT	Clec1b	C-type lectin domain family 1 member B	1	LFCSEQNATLVK	LFC(UniMod:4)SEQNATLVK	2	LFC(UniMod:4)SEQNATLVK2	4316.46		4002.25
P49242	P49242;A0A8I6ABN0;M0R6L4	RS3A_RAT	Rps3a	Small ribosomal subunit protein eS1	0	LFCVGFTK	LFC(UniMod:4)VGFTK	2	LFC(UniMod:4)VGFTK2	9651.12	13788.6	12143.8
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	LFDAPEVPLPSR	LFDAPEVPLPSR	2	LFDAPEVPLPSR2	35966.3	46510	34956.4
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	LFDAPEVPLPSRK	LFDAPEVPLPSRK	3	LFDAPEVPLPSRK3		8324.72	7583.72
B2RYF7	B2RYF7;A0A8I6AID8	WASH1_RAT	Washc1	WASH complex subunit 1	0	LFDAPLSISK	LFDAPLSISK	2	LFDAPLSISK2	43757.6	45978.8	49240.6
D4A1A5	D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	LFDDCTQQFK	LFDDC(UniMod:4)TQQFK	2	LFDDC(UniMod:4)TQQFK2	69325	73255.5	68443.1
F1LRE5	F1LRE5	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	1	LFDDKLQNCK	LFDDKLQNC(UniMod:4)K	3	LFDDKLQNC(UniMod:4)K3	14630.2	15039.9	15545.4
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	LFDDLAEK	LFDDLAEK	2	LFDDLAEK2	35787.8	52442.1	25937.2
D3ZDI7	A0A8I6A7U3;D3ZDI7	D3ZDI7_RAT	Ppp2r5a	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	0	LFDDLTSSYK	LFDDLTSSYK	2	LFDDLTSSYK2	15068.5	11293.7	4563.3
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	LFDEINPETK	LFDEINPETK	2	LFDEINPETK2	1.60675e+07	1.44495e+07	1.60097e+07
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	LFDEINPETK	LFDEINPETK	3	LFDEINPETK3	14494.1		15388.5
P14046	A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	LFDELVVDK	LFDELVVDK	2	LFDELVVDK2	197765	126694	2.08044e+07
Q03626	A0A8I6AG69;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	LFDELVVDKDLFHCLSFTIPR	LFDELVVDKDLFHC(UniMod:4)LSFTIPR	3	LFDELVVDKDLFHC(UniMod:4)LSFTIPR3	243587	241586	243234
Q03626	A0A8I6AG69;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	LFDELVVDKDLFHCLSFTIPR	LFDELVVDKDLFHC(UniMod:4)LSFTIPR	4	LFDELVVDKDLFHC(UniMod:4)LSFTIPR4	147640	62978.2	43597.8
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	LFDELVVDKDLFHCVSFTIPR	LFDELVVDKDLFHC(UniMod:4)VSFTIPR	3	LFDELVVDKDLFHC(UniMod:4)VSFTIPR3	72455.1	7.97176e+06	40226.8
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	LFDELVVDKDLFHCVSFTIPR	LFDELVVDKDLFHC(UniMod:4)VSFTIPR	4	LFDELVVDKDLFHC(UniMod:4)VSFTIPR4	118583	114015	99572.5
Q6IE52	Q6IE52	MUG2_RAT	Mug2	Murinoglobulin-2	1	LFDEPVVDK	LFDEPVVDK	2	LFDEPVVDK2	52418.5	36394.6	38639.8
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	LFDHSMEGFK	LFDHSMEGFK	2	LFDHSMEGFK2	14157.5	14540.9	12076.7
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	LFDHSMEGFK	LFDHSMEGFK	3	LFDHSMEGFK3	184676	207841	166602
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	LFDIFSQQVATVIQSR	LFDIFSQQVATVIQSR	2	LFDIFSQQVATVIQSR2	5382.82	6508.16	
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	LFDIFSQQVATVIQSR	LFDIFSQQVATVIQSR	3	LFDIFSQQVATVIQSR3	13416.7	15679.6	6172.46
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	LFDLVGEK	LFDLVGEK	2	LFDLVGEK2	102267	82843.4	94050.7
B2RYI0	B2RYI0	WDR91_RAT	Wdr91	WD repeat-containing protein 91	1	LFDMQQHGCAMSWK	LFDMQQHGC(UniMod:4)AMSWK	3	LFDMQQHGC(UniMod:4)AMSWK3	9000.17	2363.69	3218.02
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	LFDMSAFMAGPGNAK	LFDMSAFMAGPGNAK	2	LFDMSAFMAGPGNAK2	5819.53	12113.4	3362.29
A0A8I6AE33	A0A8I6AE33	A0A8I6AE33_RAT	Wdr37	WD repeat domain 37	1	LFDMSGVR	LFDMSGVR	2	LFDMSGVR2	86251.4	105616	82656.8
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	LFDPINLVFPPGGR	LFDPINLVFPPGGR	2	LFDPINLVFPPGGR2	24284.7	21357	22106.6
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	LFDPINLVFPPGGR	LFDPINLVFPPGGR	3	LFDPINLVFPPGGR3	5791.92	5432.13	4741.41
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	LFDPQLK	LFDPQLK	2	LFDPQLK2	52851	44606.9	48972
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	LFDQQLSPGLRPR	LFDQQLSPGLRPR	3	LFDQQLSPGLRPR3	64892.7	61592.8	51264.9
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	LFDSDPITVVLPEEVSK	LFDSDPITVVLPEEVSK	2	LFDSDPITVVLPEEVSK2	8.32465e+06	9.19422e+06	9.31384e+06
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	LFDSDPITVVLPEEVSK	LFDSDPITVVLPEEVSK	3	LFDSDPITVVLPEEVSK3	3.56061e+06	3.75519e+06	4.05155e+06
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	LFDSDPITVVLPEEVSKDNPK	LFDSDPITVVLPEEVSKDNPK	3	LFDSDPITVVLPEEVSKDNPK3	298616	325573	305988
P04897	P10824;P04897;P08753	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	0	LFDSICNNK	LFDSIC(UniMod:4)NNK	2	LFDSIC(UniMod:4)NNK2	1.34371e+06	1.33775e+06	1.45976e+06
Q80W57	Q80W57	ABCG2_RAT	Abcg2	Broad substrate specificity ATP-binding cassette transporter ABCG2	1	LFDSLTLLASGK	LFDSLTLLASGK	2	LFDSLTLLASGK2	1117.69	14272.9	3846.77
A0A0G2K089	A0A0G2K089	A0A0G2K089_RAT	Dennd4c	DENN domain containing 4C	1	LFDSPQEPK	LFDSPQEPK	2	LFDSPQEPK2	13599.6	8500.14	15671.5
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	LFDSTSLEHQK	LFDSTSLEHQK	2	LFDSTSLEHQK2	27913	14833.1	19176.9
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	LFDSTSLEHQK	LFDSTSLEHQK	3	LFDSTSLEHQK3	151144	149494	136959
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	LFDVAEGSTLEEASNNCIR	LFDVAEGSTLEEASNNC(UniMod:4)IR	3	LFDVAEGSTLEEASNNC(UniMod:4)IR3	153256	137952	138353
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	LFDYFNQDVFR	LFDYFNQDVFR	2	LFDYFNQDVFR2	33683.8	41819.1	28551.6
Q8R3Z7	Q8R3Z7	Q8R3Z7_RAT	Ehd4	EH-domain containing 4	1	LFEAEAQDLFR	LFEAEAQDLFR	2	LFEAEAQDLFR2	41520.5	56669	53427.6
Q8R491	Q8R491;Q641Z6	EHD3_RAT	Ehd3	EH domain-containing protein 3	0	LFEAEEQDLFK	LFEAEEQDLFK	2	LFEAEEQDLFK2	206507	182957	218206
Q8R491	Q8R491;Q641Z6	EHD3_RAT	Ehd3	EH domain-containing protein 3	0	LFEAEEQDLFKDIQSLPR	LFEAEEQDLFKDIQSLPR	3	LFEAEEQDLFKDIQSLPR3	18810.7	26209.3	22480.7
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	LFEASVETGDR	LFEASVETGDR	2	LFEASVETGDR2	13899.2	14272.3	14355.4
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	LFEAVDLSIDESSLTGETTPCSK	LFEAVDLSIDESSLTGETTPC(UniMod:4)SK	3	LFEAVDLSIDESSLTGETTPC(UniMod:4)SK3	8109.84	4559.93	11239.8
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	LFECDRDQMYYNLLK	LFEC(UniMod:4)DRDQMYYNLLK	3	LFEC(UniMod:4)DRDQMYYNLLK3	25882.6	16842.4	15998.7
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	LFEDELTLDNLTRPQLVALCK	LFEDELTLDNLTRPQLVALC(UniMod:4)K	3	LFEDELTLDNLTRPQLVALC(UniMod:4)K3	31429.9	36599.2	28458.4
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	LFEDMGLFEAFK	LFEDMGLFEAFK	2	LFEDMGLFEAFK2	13352	14354.7	14002.3
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	LFEDVANK	LFEDVANK	2	LFEDVANK2	44448.1	41339.8	40908.1
Q9Z272	Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	1	LFEELAMDVYDEVDRR	LFEELAMDVYDEVDRR	3	LFEELAMDVYDEVDRR3	17193.9	16020.9	20025.5
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	LFEELGK	LFEELGK	1	LFEELGK1	11494.2	15908.4	12562.1
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	LFEELGK	LFEELGK	2	LFEELGK2	1.32779e+06	1.43446e+06	1.36689e+06
F7FI79	F7FI79	F7FI79_RAT	Fhip2b	FHF complex subunit HOOK interacting protein 2B	1	LFEELLQKPHER	LFEELLQKPHER	3	LFEELLQKPHER3	11762.1	18060.2	
F7FI79	F7FI79	F7FI79_RAT	Fhip2b	FHF complex subunit HOOK interacting protein 2B	1	LFEELLQKPHER	LFEELLQKPHER	4	LFEELLQKPHER4	10946	5113.86	3960.84
P36876	P97888;P36876	2ABA_RAT	Ppp2r2a	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	0	LFEEPEDPSNR	LFEEPEDPSNR	2	LFEEPEDPSNR2	62313.6	57396.4	48157.5
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	LFEEPEKPPPTGRPPAPPR	LFEEPEKPPPTGRPPAPPR	4	LFEEPEKPPPTGRPPAPPR4	19026.5	13790.4	13365.2
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	LFEFAGYNVLR	LFEFAGYNVLR	2	LFEFAGYNVLR2	60721.5	54855.9	77539
Q5U2Y0	Q5U2Y0	WIPI4_RAT	Wdr45	WD repeat domain phosphoinositide-interacting protein 4	1	LFEFDTR	LFEFDTR	2	LFEFDTR2	16420.1	14761	16011
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	LFEGENEHLSSMNNYLSETYQEFR	LFEGENEHLSSMNNYLSETYQEFR	3	LFEGENEHLSSMNNYLSETYQEFR3	15696.1	32841.7	19827.5
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	LFEGENEHLSSMNNYLSETYQEFRK	LFEGENEHLSSMNNYLSETYQEFRK	4	LFEGENEHLSSMNNYLSETYQEFRK4	5610.45	5541.67	6512.85
P29314	D3ZV50;P29314	RS9_RAT	Rps9	Small ribosomal subunit protein uS4	0	LFEGNALLR	LFEGNALLR	2	LFEGNALLR2	107651	107752	99332.9
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	LFEGNMHYDTPDIR	LFEGNMHYDTPDIR	2	LFEGNMHYDTPDIR2	3100.79	4960	3692.89
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	LFEGNMHYDTPDIR	LFEGNMHYDTPDIR	3	LFEGNMHYDTPDIR3	256293	279416	265185
Q66H56	Q66H56	TTI2_RAT	Tti2	TELO2-interacting protein 2	1	LFEGTGGGGSPR	LFEGTGGGGSPR	2	LFEGTGGGGSPR2	7149	8081.45	
B1WBN7	B1WBN7	B1WBN7_RAT	Fam20c	FAM20C	1	LFEHPLYQGAVPPLTEGDVLFNVNSDIR	LFEHPLYQGAVPPLTEGDVLFNVNSDIR	4	LFEHPLYQGAVPPLTEGDVLFNVNSDIR4	16341.3	10582.3	12110.2
Q68HB8	Q68HB8	Q68HB8_RAT	Pcdh7	Protocadherin 7	1	LFEIDSTSGVVSLVGK	LFEIDSTSGVVSLVGK	2	LFEIDSTSGVVSLVGK2		2447.61	
Q68FT7	Q68FT7	Q68FT7_RAT	Farsb	Phenylalanine--tRNA ligase beta subunit	1	LFEISDIVVQDPSK	LFEISDIVVQDPSK	2	LFEISDIVVQDPSK2	12759	17321.3	17229.4
Q68FT7	Q68FT7	Q68FT7_RAT	Farsb	Phenylalanine--tRNA ligase beta subunit	1	LFEISDIVVQDPSKDVGAK	LFEISDIVVQDPSKDVGAK	3	LFEISDIVVQDPSKDVGAK3		8003.27	10903.9
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	LFELDPLTGEWHYK	LFELDPLTGEWHYK	3	LFELDPLTGEWHYK3	13315	22966.6	12546.9
Q4V8H8	Q4V8H8	EHD2_RAT	Ehd2	EH domain-containing protein 2	1	LFELEEQDLFR	LFELEEQDLFR	2	LFELEEQDLFR2	4745.14	10181.1	3564.27
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	LFELLGR	LFELLGR	2	LFELLGR2	80491.3	79825	91217.6
Q9Z2X5	Q9Z2X5	HOME3_RAT	Homer3	Homer protein homolog 3	1	LFELSELR	LFELSELR	2	LFELSELR2	25958.1	14110.7	24016.6
A0A8I6G604	A0A8I6G604	A0A8I6G604_RAT	Lman2l	Lectin, mannose-binding 2-like	1	LFELTGVR	LFELTGVR	2	LFELTGVR2	25846.1	26380.9	26452.5
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	LFEMAYK	LFEMAYK	2	LFEMAYK2	299960	315190	301858
Q66H54	Q66H54	FHI1B_RAT	Fhip1b	FHF complex subunit HOOK-interacting protein 1B	1	LFEMLVSEAR	LFEMLVSEAR	2	LFEMLVSEAR2	5670.81	8237	6676.11
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	LFENFLVDICR	LFENFLVDIC(UniMod:4)R	2	LFENFLVDIC(UniMod:4)R2	41073	23249.8	28631.9
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	LFENFLVDMAR	LFENFLVDMAR	2	LFENFLVDMAR2	14704.2	9343.74	12502.7
D4AE59	D4AE59	STK11_RAT	Stk11	Serine/threonine-protein kinase STK11	1	LFENIGR	LFENIGR	2	LFENIGR2	39989.1	34938.9	25832.2
Q7TP48	Q7TP48	APMAP_RAT	Apmap	Adipocyte plasma membrane-associated protein	1	LFENQLNGPESIVNIGDVLFTGTADGR	LFENQLNGPESIVNIGDVLFTGTADGR	3	LFENQLNGPESIVNIGDVLFTGTADGR3	7892.91	14058.1	11798.4
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	LFENYIELK	LFENYIELK	2	LFENYIELK2	14546	12829.1	21087.2
Q5XIE1	Q5XIE1	THEM6_RAT	Them6	Protein THEM6	1	LFEPFEVHTR	LFEPFEVHTR	3	LFEPFEVHTR3	32089.1	20760.6	31288.6
P51111	P51111	HD_RAT	Htt	Huntingtin	1	LFEPLVIK	LFEPLVIK	2	LFEPLVIK2	114235	117635	103576
Q63450	Q63450;A0A8I6AUH0	KCC1A_RAT	Camk1	Calcium/calmodulin-dependent protein kinase type 1	0	LFEQILK	LFEQILK	2	LFEQILK2	57435.6	47385.6	45525.7
A0A8I5ZYZ8	A0A8I5ZYZ8	A0A8I5ZYZ8_RAT	Ube2m	Ubiquitin-conjugating enzyme E2M	1	LFEQNVQR	LFEQNVQR	2	LFEQNVQR2	46824.3	36663.8	39471.9
P09215	P09215	KPCD_RAT	Prkcd	Protein kinase C delta type	1	LFERDPAK	LFERDPAK	2	LFERDPAK2	9546.71	7808.53	7126.99
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	LFESEFDK	LFESEFDK	2	LFESEFDK2	7025.97	3519.86	5260.08
Q4G050	Q4G050	MKNK1_RAT	Mknk1	MAP kinase-interacting serine/threonine-protein kinase 1	1	LFESIQEGK	LFESIQEGK	2	LFESIQEGK2	20639	27033	17753.7
B2RYI2	B2RYI2	B2RYI2_RAT	Srp68	Signal recognition particle subunit SRP68	1	LFESMLSECR	LFESMLSEC(UniMod:4)R	2	LFESMLSEC(UniMod:4)R2		1768.2	4014.47
D3ZM19	D3ZM19	D3ZM19_RAT	Evi2b	Ecotropic viral integration site 2B	1	LFESSEHINDTNNLK	LFESSEHINDTNNLK	2	LFESSEHINDTNNLK2	8325.38	8539.83	12415
D3ZM19	D3ZM19	D3ZM19_RAT	Evi2b	Ecotropic viral integration site 2B	1	LFESSEHINDTNNLK	LFESSEHINDTNNLK	3	LFESSEHINDTNNLK3	314710	388259	397942
D3ZRI9	D3ZRI9	D3ZRI9_RAT	Gan	Gigaxonin	1	LFESVECYDPR	LFESVEC(UniMod:4)YDPR	2	LFESVEC(UniMod:4)YDPR2	7357.83	5289.25	9279.1
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LFETKITQVLHFTK	LFETKITQVLHFTK	3	LFETKITQVLHFTK3	8497.15	6917.1	
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LFETKITQVLHFTK	LFETKITQVLHFTK	4	LFETKITQVLHFTK4	2359.91	4128.55	1636.97
P63329	P20651;P63329	PP2BA_RAT	Ppp3ca	Protein phosphatase 3 catalytic subunit alpha	0	LFEVGGSPANTR	LFEVGGSPANTR	2	LFEVGGSPANTR2	171199	182928	149097
O08679	Q8VHF0;O08678;O08679;D4A6T9	MARK2_RAT	Mark2	Serine/threonine-protein kinase MARK2	0	LFEVIETEK	LFEVIETEK	2	LFEVIETEK2	18826.4	19303.8	19710.2
D3ZU63	D3ZU63	D3ZU63_RAT	Stard13	StAR-related lipid transfer domain containing 13	1	LFEVPHEMVAQSR	LFEVPHEMVAQSR	3	LFEVPHEMVAQSR3	9380.09		
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	LFEWVVNK	LFEWVVNK	2	LFEWVVNK2	76475.8	73892.5	71278.1
P62138	P62138;P63088	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	0	LFEYGGFPPESNYLFLGDYVDR	LFEYGGFPPESNYLFLGDYVDR	3	LFEYGGFPPESNYLFLGDYVDR3	11345.7	23158.1	8128.73
G3V9A0	G3V9A0	G3V9A0_RAT	Plekhg2	Pleckstrin homology and RhoGEF domain containing G2	1	LFFENHPASIPAK	LFFENHPASIPAK	3	LFFENHPASIPAK3	4149.64		
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	LFFGPQHRPVILR	LFFGPQHRPVILR	3	LFFGPQHRPVILR3	832571	753699	748041
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	LFFGPQHRPVILR	LFFGPQHRPVILR	4	LFFGPQHRPVILR4	1.22506e+06	1.2111e+06	1.17038e+06
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	LFFILLTPANHSVADK	LFFILLTPANHSVADK	3	LFFILLTPANHSVADK3	10357.9	12287.6	
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	LFFILLTPANHSVADKIPLTK	LFFILLTPANHSVADKIPLTK	3	LFFILLTPANHSVADKIPLTK3	14386.2	10126.5	4610.29
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	LFFILLTPANHSVADKIPLTK	LFFILLTPANHSVADKIPLTK	4	LFFILLTPANHSVADKIPLTK4	47477.1	41699.9	64879.9
A0A8I5ZQU7	A0A8I5ZQU7	A0A8I5ZQU7_RAT	Casp7	Caspase 7	1	LFFIQACR	LFFIQAC(UniMod:4)R	2	LFFIQAC(UniMod:4)R2	14784.9	13502.9	13682.5
O35763	O35763;P31977;Q5PQK5	MOES_RAT	Msn	Moesin	0	LFFLQVK	LFFLQVK	2	LFFLQVK2	373444	322788	336339
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	LFFPLHLWVK	LFFPLHLWVK	2	LFFPLHLWVK2	4790.72	9662.83	5069.05
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	LFFPLHLWVK	LFFPLHLWVK	3	LFFPLHLWVK3	55224.7	33608.9	32016.7
Q5M7A4	Q5M7A4	UBA5_RAT	Uba5	Ubiquitin-like modifier-activating enzyme 5	1	LFFQPYQAGMSK	LFFQPYQAGMSK	2	LFFQPYQAGMSK2	165101	180329	157734
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	LFFTTASAHLK	LFFTTASAHLK	3	LFFTTASAHLK3	11428.3	11671.8	5810.4
Q63016	Q63016;D3ZMM8	LAT1_RAT	Slc7a5	Large neutral amino acids transporter small subunit 1	0	LFFVGSR	LFFVGSR	2	LFFVGSR2	50379.9	51965.8	62370.1
Q9JMB5	Q9JMB5	ADRM1_RAT	Adrm1	Proteasomal ubiquitin receptor ADRM1	1	LFFWMQEPK	LFFWMQEPK	2	LFFWMQEPK2	10538.9	14293.6	13262.9
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LFGAAEVQR	LFGAAEVQR	2	LFGAAEVQR2	994378	997564	1.01476e+06
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	LFGAKPVK	LFGAKPVK	2	LFGAKPVK2	109406	112524	95110.6
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	LFGALTPLEPR	LFGALTPLEPR	2	LFGALTPLEPR2	96546	95851.9	93396.2
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	LFGAPEPSTIAR	LFGAPEPSTIAR	2	LFGAPEPSTIAR2	57757.4	55807.4	52212.9
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	LFGATNPK	LFGATNPK	2	LFGATNPK2	76128.3	73583.8	77755.7
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	LFGDISDR	LFGDISDR	2	LFGDISDR2	35999.3	28757.6	44556.5
B5DF86	B5DF86	B5DF86_RAT	Cog8	Conserved oligomeric Golgi complex subunit 8	1	LFGDVEASLGHLLDR	LFGDVEASLGHLLDR	3	LFGDVEASLGHLLDR3	18172.5	15936.5	15347.3
M0R8H7	M0R8H7	M0R8H7_RAT	Ifnar2	Interferon alpha and beta receptor subunit 2	1	LFGESLWK	LFGESLWK	2	LFGESLWK2	39557.9	27687.7	28611.1
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	LFGFVAR	LFGFVAR	2	LFGFVAR2	38952.5	32357.7	28910
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	LFGGDLEK	LFGGDLEK	2	LFGGDLEK2	74337	80490.2	94334.5
Q9WUD9	Q9WUD9	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	1	LFGGFNSSDTVTSPQR	LFGGFNSSDTVTSPQR	2	LFGGFNSSDTVTSPQR2	167948	186216	186088
Q9WUD9	Q9WUD9	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	1	LFGGFNSSDTVTSPQR	LFGGFNSSDTVTSPQR	3	LFGGFNSSDTVTSPQR3	47101.1	36703.7	52362
Q8VHK0	Q8VHK0	ACOT8_RAT	Acot8	Acyl-coenzyme A thioesterase 8	1	LFGGQIVGQALVAAAK	LFGGQIVGQALVAAAK	2	LFGGQIVGQALVAAAK2	19011.8	29092.3	37966.4
Q8VHK0	Q8VHK0	ACOT8_RAT	Acot8	Acyl-coenzyme A thioesterase 8	1	LFGGQIVGQALVAAAK	LFGGQIVGQALVAAAK	3	LFGGQIVGQALVAAAK3	3442.72	6019.52	3525.29
D3ZW49	D3ZW49	D3ZW49_RAT	Tmem9b	TMEM9 domain family, member B	1	LFGHSQLLQSDDDIGDHQPFANAHDVLAR	LFGHSQLLQSDDDIGDHQPFANAHDVLAR	4	LFGHSQLLQSDDDIGDHQPFANAHDVLAR4	9862.91	8238.05	12348.9
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	LFGHSSTSALSAILR	LFGHSSTSALSAILR	3	LFGHSSTSALSAILR3	42752.6	73924.5	67770.3
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	LFGIESSSGTILWK	LFGIESSSGTILWK	2	LFGIESSSGTILWK2	19189.3	10299.3	29320.5
D4A2I4	D4A2I4	D4A2I4_RAT	Ormdl2	ORM1-like protein	1	LFGINKY	LFGINKY	2	LFGINKY2		43039.2	34596.9
Q5U2Z4	Q5U2Z4	Q5U2Z4_RAT	Nfkb2	Nuclear factor kappa B subunit 2	1	LFGLAQR	LFGLAQR	2	LFGLAQR2	12193.2	9036.1	10638.4
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	LFGLASAAVDR	LFGLASAAVDR	2	LFGLASAAVDR2	25539.4	31541.3	18876.1
O88994	O88994	MARC2_RAT	Mtarc2	Mitochondrial amidoxime reducing component 2	1	LFGLDIK	LFGLDIK	2	LFGLDIK2	74631.2	62497.2	69819.6
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	LFGLFEAMSAIEMMDPK	LFGLFEAMSAIEMMDPK	2	LFGLFEAMSAIEMMDPK2		6555.02	8199.54
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	LFGLLVK	LFGLLVK	2	LFGLLVK2	78144.5	62728.6	57810.3
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	LFGLSPFEPWTTK	LFGLSPFEPWTTK	2	LFGLSPFEPWTTK2	22251.4	18057.2	26060.9
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	LFGMVLGSAPYTVPLPK	LFGMVLGSAPYTVPLPK	2	LFGMVLGSAPYTVPLPK2	118931	139065	124695
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	LFGMVLGSAPYTVPLPK	LFGMVLGSAPYTVPLPK	3	LFGMVLGSAPYTVPLPK3	29334.5	13994.3	29978.3
F1M171	F1M171	F1M171_RAT	Leg1	Similar to RIKEN cDNA 2310057J18	1	LFGNTDR	LFGNTDR	2	LFGNTDR2	336965	326224	354375
D3ZAQ0	D3ZAQ0	D3ZAQ0_RAT	Fundc2	FUN14 domain containing 2	1	LFGPESGPSAEK	LFGPESGPSAEK	2	LFGPESGPSAEK2	59716.4	52144	49188.8
A0A8I6AAD8	A0A8I6AAD8	A0A8I6AAD8_RAT	Snx4	Sorting nexin 4	1	LFGQETPEQR	LFGQETPEQR	2	LFGQETPEQR2	22173.5	26179.3	25224.1
Q68G38	Q68G38	TOR1A_RAT	Tor1a	Torsin-1A	1	LFGQHLAK	LFGQHLAK	2	LFGQHLAK2	12466.9	14071.8	11842.3
Q2M2S1	Q2M2S1	Q2M2S1_RAT	Tor1b	Torsin	1	LFGQHLATEVILK	LFGQHLATEVILK	3	LFGQHLATEVILK3	8016.94	14182.6	3347.22
F1LWX9	F1LWX9	F1LWX9_RAT	Tmem117	Transmembrane protein 117	1	LFGQLLR	LFGQLLR	2	LFGQLLR2	42309.4	39327.3	25631.5
Q9EQV6	Q9EQV6	TPP1_RAT	Tpp1	Tripeptidyl-peptidase 1	1	LFGSSFAHQASVAR	LFGSSFAHQASVAR	2	LFGSSFAHQASVAR2	4938.03	3358.44	
Q9EQV6	Q9EQV6	TPP1_RAT	Tpp1	Tripeptidyl-peptidase 1	1	LFGSSFAHQASVAR	LFGSSFAHQASVAR	3	LFGSSFAHQASVAR3	116270	113557	112328
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	LFGTSPAAEATISPPEPAPALEAPVR	LFGTSPAAEATISPPEPAPALEAPVR	3	LFGTSPAAEATISPPEPAPALEAPVR3	34740	38529.3	33704.9
A0A8I5ZSB0	A0A8I5ZSB0	A0A8I5ZSB0_RAT	Igtp	Interferon gamma induced GTPase	1	LFGVDNESLR	LFGVDNESLR	2	LFGVDNESLR2	24868.2	24670.6	19750.1
Q3B7U4	Q3B7U4	CTU2_RAT	Ctu2	Cytoplasmic tRNA 2-thiolation protein 2	1	LFGVPSVFTPAIDTK	LFGVPSVFTPAIDTK	2	LFGVPSVFTPAIDTK2	14013.5	12044.1	11092.4
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	LFGVVCANVDEAQR	LFGVVC(UniMod:4)ANVDEAQR	2	LFGVVC(UniMod:4)ANVDEAQR2	29947.6	24716.2	30817.3
B0BNM1	B0BNM1	NNRE_RAT	Naxe	NAD(P)H-hydrate epimerase	1	LFGYQPTIYYPK	LFGYQPTIYYPK	2	LFGYQPTIYYPK2	79379.3	82233.8	82638.6
P29994	P29994;P29995;Q63269	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	0	LFHAEQEK	LFHAEQEK	2	LFHAEQEK2	44910.8	42849.9	34031
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	LFHECDSHMWR	LFHEC(UniMod:4)DSHMWR	2	LFHEC(UniMod:4)DSHMWR2	8588.67	9847.75	12052.8
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	LFHECDSHMWR	LFHEC(UniMod:4)DSHMWR	3	LFHEC(UniMod:4)DSHMWR3	73886.1	69455.6	55868.3
F1LRE5	F1LRE5	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	1	LFHEDGECWVYDEPLLK	LFHEDGEC(UniMod:4)WVYDEPLLK	3	LFHEDGEC(UniMod:4)WVYDEPLLK3	12739.7	18560.6	8949.16
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	LFHEELALQWVVCSGSVR	LFHEELALQWVVC(UniMod:4)SGSVR	3	LFHEELALQWVVC(UniMod:4)SGSVR3	5841.56		
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	LFHFLGIFLAK	LFHFLGIFLAK	3	LFHFLGIFLAK3	1236.71	4239.8	
Q99ND9	Q99ND9	RWDD1_RAT	Rwdd1	RWD domain-containing protein 1	1	LFHGTPVTIENFLSWK	LFHGTPVTIENFLSWK	2	LFHGTPVTIENFLSWK2	10240.8	8008.16	8643.76
Q99ND9	Q99ND9	RWDD1_RAT	Rwdd1	RWD domain-containing protein 1	1	LFHGTPVTIENFLSWK	LFHGTPVTIENFLSWK	3	LFHGTPVTIENFLSWK3	16080.5	23571.5	18357.3
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	LFHIDFGYILGR	LFHIDFGYILGR	3	LFHIDFGYILGR3	6368.62	2347.06	
M0RCS2	M0RCS2	M0RCS2_RAT	Tbl2	Transducin (beta)-like 2	1	LFHNTPGHR	LFHNTPGHR	2	LFHNTPGHR2	7243.43		
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	LFHPHQEPAKPAQAPWPTTEK	LFHPHQEPAKPAQAPWPTTEK	4	LFHPHQEPAKPAQAPWPTTEK4	27195.5	16511.4	29073.5
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	LFHPLEQSIWAVK	LFHPLEQSIWAVK	3	LFHPLEQSIWAVK3	5628.67	9687.57	9735.85
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	LFHSLEKEYEK	LFHSLEKEYEK	3	LFHSLEKEYEK3	5779.81	6728.63	
D3ZE72	D3ZE72	D3ZE72_RAT	Metap1	Methionine aminopeptidase	1	LFHTAPNVPHYAK	LFHTAPNVPHYAK	3	LFHTAPNVPHYAK3	47112.8		
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	LFHVRPVTQGDVYR	LFHVRPVTQGDVYR	3	LFHVRPVTQGDVYR3	21283.8	23671.6	26367.3
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	LFHVRPVTQGDVYR	LFHVRPVTQGDVYR	4	LFHVRPVTQGDVYR4	11288.3	6105.35	6240.84
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	LFHVRPVTQTDVYR	LFHVRPVTQTDVYR	3	LFHVRPVTQTDVYR3	71621.1	62163.3	34046.2
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	LFHVRPVTQTDVYR	LFHVRPVTQTDVYR	4	LFHVRPVTQTDVYR4	66509.1	73810.2	85377.9
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	LFHVSEDPSDPNEK	LFHVSEDPSDPNEK	3	LFHVSEDPSDPNEK3	3448.56		3898.82
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	LFHVSEDPSDPNEKHPNLVHK	LFHVSEDPSDPNEKHPNLVHK	4	LFHVSEDPSDPNEKHPNLVHK4	2474.18	2233.79	2108.88
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	LFIATAVDGKPEYFPTISSR	LFIATAVDGKPEYFPTISSR	3	LFIATAVDGKPEYFPTISSR3	27186.6	29448.8	24795.3
Q641X8	Q641X8;A0A0G2K273	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	0	LFIFETFCR	LFIFETFC(UniMod:4)R	2	LFIFETFC(UniMod:4)R2	16300.8	13936.6	15047.8
Q6URK4	D4A6A2;F1M6C7;Q6URK4	ROA3_RAT	Hnrnpa3	Heterogeneous nuclear ribonucleoprotein A3	0	LFIGGLSFETTDDSLREHFEK	LFIGGLSFETTDDSLREHFEK	4	LFIGGLSFETTDDSLREHFEK4	11369.1	12423.8	9061.49
Q4QQT3	Q4QQT3	CELF1_RAT	Celf1	CUGBP Elav-like family member 1	1	LFIGMISK	LFIGMISK	2	LFIGMISK2	10554.1	17950.5	12939.1
Q792H5	Q792H5	CELF2_RAT	Celf2	CUGBP Elav-like family member 2	1	LFIGMVSK	LFIGMVSK	2	LFIGMVSK2	30688.9	103326	107664
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	LFILMEAR	LFILMEAR	2	LFILMEAR2	55093.9	40689.3	47149.5
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	LFILSSSSGDFSATEFVYPAR	LFILSSSSGDFSATEFVYPAR	3	LFILSSSSGDFSATEFVYPAR3	2415.03	3654.87	2772.44
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	LFIMLENSQMR	LFIMLENSQMR	2	LFIMLENSQMR2	368372	334436	348148
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	LFISSTFR	LFISSTFR	2	LFISSTFR2	14256.1	15276.5	8453.51
P80385	P80385	AAKG1_RAT	Prkag1	5'-AMP-activated protein kinase subunit gamma-1	1	LFITEFPKPEFMSK	LFITEFPKPEFMSK	3	LFITEFPKPEFMSK3	110331	113805	125868
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	LFIVDAR	LFIVDAR	2	LFIVDAR2	252973	239377	234480
P48508	P48508	GSH0_RAT	Gclm	Glutamate--cysteine ligase regulatory subunit	1	LFIVGSNSSSSTR	LFIVGSNSSSSTR	2	LFIVGSNSSSSTR2	21375.4	21049	15366.6
G3V762	G3V762	G3V762_RAT	Gfus	GDP-L-fucose synthase	1	LFIWVLR	LFIWVLR	2	LFIWVLR2	5403.89	7562.23	4889.46
Q63377	Q63377	AT1B3_RAT	Atp1b3	Sodium/potassium-transporting ATPase subunit beta-3	1	LFIYNPTSGEFLGR	LFIYNPTSGEFLGR	2	LFIYNPTSGEFLGR2	212029	227829	216889
Q63377	Q63377	AT1B3_RAT	Atp1b3	Sodium/potassium-transporting ATPase subunit beta-3	1	LFIYNPTSGEFLGR	LFIYNPTSGEFLGR	3	LFIYNPTSGEFLGR3	4024.67	4405.25	
Q6P9U8	Q6P9U8	EIF3H_RAT	Eif3h	Eukaryotic translation initiation factor 3 subunit H	1	LFKPHQAPAR	LFKPHQAPAR	3	LFKPHQAPAR3		69376.3	77531.4
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	LFLAEFQSIPR	LFLAEFQSIPR	2	LFLAEFQSIPR2	172866	149760	189087
Q6AY86	Q6AY86	VP26A_RAT	Vps26a	Vacuolar protein sorting-associated protein 26A	1	LFLAGYDPTPTMR	LFLAGYDPTPTMR	2	LFLAGYDPTPTMR2	47012.6	43035	41127.6
B1WBS4	B1WBS4	B1WBS4_RAT	Vps26b	VPS26 retromer complex component B	1	LFLAGYELTPTMR	LFLAGYELTPTMR	2	LFLAGYELTPTMR2	19740.9	10418.7	20318.1
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	LFLASLAAAGSGTDAQVALVNEVK	LFLASLAAAGSGTDAQVALVNEVK	3	LFLASLAAAGSGTDAQVALVNEVK3	4900.09		4522.18
Q3ZAU6	Q3ZAU6	Q3ZAU6_RAT	Rnf14	RBR-type E3 ubiquitin transferase	1	LFLCSICFCEK	LFLC(UniMod:4)SIC(UniMod:4)FC(UniMod:4)EK	2	LFLC(UniMod:4)SIC(UniMod:4)FC(UniMod:4)EK2	8703.75	11597.2	7625.09
Q4V892	Q4V892	SIGIR_RAT	Sigirr	Single Ig IL-1-related receptor	1	LFLEDRDLLPR	LFLEDRDLLPR	3	LFLEDRDLLPR3	27425.1		31011.5
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	LFLEGFR	LFLEGFR	2	LFLEGFR2	116041	111887	
Q5XI64	Q5XI64	ABHD6_RAT	Abhd6	Monoacylglycerol lipase ABHD6	1	LFLEIVSEK	LFLEIVSEK	2	LFLEIVSEK2	16933	46505.8	17788.6
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	LFLELEPQVR	LFLELEPQVR	2	LFLELEPQVR2	70193.1	65458.3	58352.9
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	LFLFHTSLPIAEAPGK	LFLFHTSLPIAEAPGK	3	LFLFHTSLPIAEAPGK3	37875.9	26019.3	35480
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	LFLGDLCR	LFLGDLC(UniMod:4)R	2	LFLGDLC(UniMod:4)R2	629374	658119	582943
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	LFLGPYK	LFLGPYK	2	LFLGPYK2	51232.4	41375.8	54358
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	LFLHNNR	LFLHNNR	2	LFLHNNR2	40079	28327.4	24497
P97633	P97633	KC1A_RAT	Csnk1a1	Casein kinase I isoform alpha	1	LFLIDFGLAK	LFLIDFGLAK	2	LFLIDFGLAK2	2778.81	4397.82	2957.1
A0A8I6A896	A0A8I6A896	A0A8I6A896_RAT	Ap4b1	AP complex subunit beta	1	LFLILAK	LFLILAK	2	LFLILAK2	7632.79	6429.46	4426.51
Q5XFW6	Q5XFW6	WDR6_RAT	Wdr6	WD repeat-containing protein 6	1	LFLLQDSGR	LFLLQDSGR	2	LFLLQDSGR2	15691.4	18413.7	17474.4
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	LFLLTVHK	LFLLTVHK	2	LFLLTVHK2	15483	8967.22	16183.6
P13264	P13264	GLSK_RAT	Gls	Glutaminase kidney isoform, mitochondrial	1	LFLNEDDKPHNPMVNAGAIVVTSLIK	LFLNEDDKPHNPMVNAGAIVVTSLIK	3	LFLNEDDKPHNPMVNAGAIVVTSLIK3		946.798	
P13264	P13264	GLSK_RAT	Gls	Glutaminase kidney isoform, mitochondrial	1	LFLNEDDKPHNPMVNAGAIVVTSLIK	LFLNEDDKPHNPMVNAGAIVVTSLIK	4	LFLNEDDKPHNPMVNAGAIVVTSLIK4	17709	22821.9	29854.6
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	LFLNETQTQEITEDIPMK	LFLNETQTQEITEDIPMK	3	LFLNETQTQEITEDIPMK3	12449.6	11236.8	15406.1
A0A8J8Y8E0	A0A8J8Y8E0	A0A8J8Y8E0_RAT	Fibp	FGF1 intracellular binding protein	1	LFLNQYSASVHSLDGFR	LFLNQYSASVHSLDGFR	3	LFLNQYSASVHSLDGFR3	4785.39	2357.25	8409.94
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	LFLPDGMEAR	LFLPDGMEAR	2	LFLPDGMEAR2	22753.9	18295	21659.5
A0A0G2QC02	A0A0G2QC02	A0A0G2QC02_RAT	Skic2	Ski2 like RNA helicase	1	LFLPEGPCEHTVAK	LFLPEGPC(UniMod:4)EHTVAK	3	LFLPEGPC(UniMod:4)EHTVAK3	10798.2	9351.98	7265.87
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	LFLQFTTGTDR	LFLQFTTGTDR	2	LFLQFTTGTDR2	2562.86	5538.37	3693.28
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	LFLQFVTGSPR	LFLQFVTGSPR	2	LFLQFVTGSPR2	3618.27	4586.82	3682.32
P52873	P52873	PYC_RAT	Pc	Pyruvate carboxylase, mitochondrial	1	LFLQGPK	LFLQGPK	2	LFLQGPK2	16367.4	17452.6	10322
Q80WD1	Q80WD1	R4RL2_RAT	Rtn4rl2	Reticulon-4 receptor-like 2	1	LFLQNNLIR	LFLQNNLIR	2	LFLQNNLIR2	47403.3	55348.4	47315.1
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	LFLSHFGFLSLEALKEPANSR	LFLSHFGFLSLEALKEPANSR	4	LFLSHFGFLSLEALKEPANSR4	5116.84	8939.83	4813.6
P31053	P31053	CD37_RAT	Cd37	Leukocyte antigen CD37	1	LFLSQLSR	LFLSQLSR	2	LFLSQLSR2	23189.3	28588.4	26652.2
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	LFLSYDYAVR	LFLSYDYAVR	2	LFLSYDYAVR2	149430	172212	150611
D3ZD62	D3ZD62	D3ZD62_RAT	Ndst2	[heparan sulfate]-glucosamine N-sulfotransferase	1	LFLTDFFR	LFLTDFFR	2	LFLTDFFR2	4102.17		2809.38
Q5M871	Q5M871	FAIM3_RAT	Fcmr	Fas apoptotic inhibitory molecule 3	1	LFLVEMTQLTK	LFLVEMTQLTK	2	LFLVEMTQLTK2	387607	401556	379496
Q5HZV9	Q5HZV9	PP1R7_RAT	Ppp1r7	Protein phosphatase 1 regulatory subunit 7	1	LFLVNNK	LFLVNNK	2	LFLVNNK2	156690	170875	154194
P48548	P48548	KCNJ5_RAT	Kcnj5	G protein-activated inward rectifier potassium channel 4	1	LFLVSPLIISHEINEK	LFLVSPLIISHEINEK	2	LFLVSPLIISHEINEK2	3784.08	3505.1	5284.58
P48548	P48548	KCNJ5_RAT	Kcnj5	G protein-activated inward rectifier potassium channel 4	1	LFLVSPLIISHEINEK	LFLVSPLIISHEINEK	3	LFLVSPLIISHEINEK3	83859.9	78893.4	82952.1
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	LFLYDLPEGK	LFLYDLPEGK	2	LFLYDLPEGK2	120775	131627	136886
Q6P9U8	Q6P9U8	EIF3H_RAT	Eif3h	Eukaryotic translation initiation factor 3 subunit H	1	LFMAQALQEYSN	LFMAQALQEYSN	2	LFMAQALQEYSN2	13958.9	12228.6	19144.8
B0BN56	B0BN56	RT31_RAT	Mrps31	Small ribosomal subunit protein mS31	1	LFMELVTCGLSK	LFMELVTC(UniMod:4)GLSK	2	LFMELVTC(UniMod:4)GLSK2	4947.85		3189.25
Q66H12	Q66H12	NAGAB_RAT	Naga	Alpha-N-acetylgalactosaminidase	1	LFMEMADR	LFMEMADR	2	LFMEMADR2	51759.3	37069.3	39834.1
D4A1A5	A0A8I6A6K6;D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	0	LFMEMNQK	LFMEMNQK	2	LFMEMNQK2	116180	115398	93560.4
A0A8I6A6I4	A0A8I6A6I4	A0A8I6A6I4_RAT	Atp11b	Phospholipid-transporting ATPase	1	LFMEVCR	LFMEVC(UniMod:4)R	2	LFMEVC(UniMod:4)R2	12895.3	7324.74	5383.42
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	LFMLLLEK	LFMLLLEK	2	LFMLLLEK2	14149.8	10372.5	16442
Q6MG61	Q6MG61	CLIC1_RAT	Clic1	Chloride intracellular channel protein 1	1	LFMVLWLK	LFMVLWLK	2	LFMVLWLK2	32520.9	22158.9	18797.9
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	LFMYGPMAGK	LFMYGPMAGK	2	LFMYGPMAGK2	21469.8	19329.7	29643.7
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	LFNDFDVK	LFNDFDVK	2	LFNDFDVK2	35284.1	31291.4	27365.8
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	LFNGCPLQIHSTAAWTHPSTK	LFNGC(UniMod:4)PLQIHSTAAWTHPSTK	4	LFNGC(UniMod:4)PLQIHSTAAWTHPSTK4	18960	11633.2	10978.7
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	LFNGSMEAFIK	LFNGSMEAFIK	2	LFNGSMEAFIK2	33611.9	22892	31213.2
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	LFNIHED	LFNIHED	1	LFNIHED1	1771.49	2910.78	2411.97
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	LFNIHED	LFNIHED	2	LFNIHED2	134490	124923	138152
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	LFNIPAER	LFNIPAER	2	LFNIPAER2	52868.4	45123.6	70593.6
D3ZIT4	D3ZIT4	D3ZIT4_RAT	Anapc7	Anaphase promoting complex subunit 7	1	LFNISDQHAEPWVVSGCHSFYSK	LFNISDQHAEPWVVSGC(UniMod:4)HSFYSK	4	LFNISDQHAEPWVVSGC(UniMod:4)HSFYSK4	1796.2		
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	LFNISGHVNHPCTVEEEMSVPLK	LFNISGHVNHPC(UniMod:4)TVEEEMSVPLK	3	LFNISGHVNHPC(UniMod:4)TVEEEMSVPLK3	1729.5	5809.19	6062.42
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	LFNISGHVNHPCTVEEEMSVPLK	LFNISGHVNHPC(UniMod:4)TVEEEMSVPLK	4	LFNISGHVNHPC(UniMod:4)TVEEEMSVPLK4	30240.5	33534.4	28513
D4A533	D4A533	D4A533_RAT	Tapt1	Transmembrane anterior posterior transformation 1	1	LFNPPPASTPAKPSNK	LFNPPPASTPAKPSNK	3	LFNPPPASTPAKPSNK3	40847.3	62508.5	44993.9
F7EUU4	F7EUU4	F7EUU4_RAT	Cops5	COP9 signalosome subunit 5	1	LFNQINVA	LFNQINVA	1	LFNQINVA1	11444.4	12037.9	12798.8
F7EUU4	F7EUU4	F7EUU4_RAT	Cops5	COP9 signalosome subunit 5	1	LFNQINVA	LFNQINVA	2	LFNQINVA2	23712.9	18358.6	38173.1
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	LFNSVCESK	LFNSVC(UniMod:4)ESK	2	LFNSVC(UniMod:4)ESK2	16088.4	27988.6	18220.2
B5DFI9	B5DFI9;Q63065	B5DFI9_RAT	Pdk3	Protein-serine/threonine kinase	0	LFNYMYSTAPR	LFNYMYSTAPR	2	LFNYMYSTAPR2	10553.1	9256.75	10456.3
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	LFPAVSVPSHSNYSEWLR	LFPAVSVPSHSNYSEWLR	3	LFPAVSVPSHSNYSEWLR3	26251.7	16668.4	23618
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	LFPEASPGALGR	LFPEASPGALGR	2	LFPEASPGALGR2	245550	309014	311276
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	LFPGGLDQK	LFPGGLDQK	2	LFPGGLDQK2	9.19191e+06	9.31488e+06	8.74917e+06
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	LFPGQQYLYVLR	LFPGQQYLYVLR	2	LFPGQQYLYVLR2	5.37569e+06	3.99437e+06	3.59777e+06
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	LFPGQQYLYVLR	LFPGQQYLYVLR	3	LFPGQQYLYVLR3	50762.3	46371.4	34141.3
F7FFW7	F7FFW7	F7FFW7_RAT	Atp6v0d1	ATPase H+ transporting V0 subunit D1	1	LFPHCGR	LFPHC(UniMod:4)GR	2	LFPHC(UniMod:4)GR2	68184.3	49186.7	60767.5
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	LFPHEVADVQPVLDMFTGQNPK	LFPHEVADVQPVLDMFTGQNPK	3	LFPHEVADVQPVLDMFTGQNPK3	4747.43	7791.04	5277.76
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	LFPHVTPK	LFPHVTPK	2	LFPHVTPK2	24536.8	29223.7	16083.7
Q9EPH8	Q9EPH8	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	1	LFPLIQAMHPSLAGK	LFPLIQAMHPSLAGK	3	LFPLIQAMHPSLAGK3	55432	42530	44368.1
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	LFPNADSK	LFPNADSK	2	LFPNADSK2	160486	182261	169510
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	LFPNMLPSTFETQSIK	LFPNMLPSTFETQSIK	2	LFPNMLPSTFETQSIK2	14556.3		16591.7
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	LFPNMLPSTFETQSIKEER	LFPNMLPSTFETQSIKEER	3	LFPNMLPSTFETQSIKEER3	53901.1	47765	49425.6
Q8VHE9	Q8VHE9	RETST_RAT	Retsat	All-trans-retinol 13,14-reductase	1	LFPQLEGK	LFPQLEGK	2	LFPQLEGK2	40429.6	44087.5	33878.7
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	LFPRPVVAFQAGSFLASR	LFPRPVVAFQAGSFLASR	3	LFPRPVVAFQAGSFLASR3	2433.43	7389.76	7630.26
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	LFPSPGLPTR	LFPSPGLPTR	2	LFPSPGLPTR2	20716.6	18502.3	32568.9
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	LFPSTFYSAQLR	LFPSTFYSAQLR	2	LFPSTFYSAQLR2	772765	819480	761251
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	LFPSTFYSAQLR	LFPSTFYSAQLR	3	LFPSTFYSAQLR3	16558.1	22420.5	17247.2
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	LFPYALAFMPPGYEEDMK	LFPYALAFMPPGYEEDMK	3	LFPYALAFMPPGYEEDMK3	12517.4	11349.8	16443.7
Q9JM04	Q9JM04	IPO13_RAT	Ipo13	Importin-13	1	LFQAEDSPVDSQGR	LFQAEDSPVDSQGR	2	LFQAEDSPVDSQGR2	3934.53	9431.16	
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	LFQANEEEEPEK	LFQANEEEEPEK	2	LFQANEEEEPEK2	9669.05	4237.05	6903.94
F1M386	F1M386	RPGF2_RAT	Rapgef2	Rap guanine nucleotide exchange factor 2	1	LFQDLQDLFDPSR	LFQDLQDLFDPSR	2	LFQDLQDLFDPSR2	3969.89	2142.6	6765.16
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LFQDMLHSIDWMDEIK	LFQDMLHSIDWMDEIK	3	LFQDMLHSIDWMDEIK3	15755.5	30419.4	27948.8
P61980	A0A8I5ZZG4;P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	LFQECCPHSTDR	LFQEC(UniMod:4)C(UniMod:4)PHSTDR	2	LFQEC(UniMod:4)C(UniMod:4)PHSTDR2	8113.15	8009.37	11001.5
P61980	A0A8I5ZZG4;P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	LFQECCPHSTDR	LFQEC(UniMod:4)C(UniMod:4)PHSTDR	3	LFQEC(UniMod:4)C(UniMod:4)PHSTDR3	201307	190081	194089
P35171	P35171	CX7A2_RAT	Cox7a2	Cytochrome c oxidase subunit 7A2, mitochondrial	1	LFQEDNGMPVHLK	LFQEDNGMPVHLK	2	LFQEDNGMPVHLK2	9835.1	5375.56	3170.13
P35171	P35171	CX7A2_RAT	Cox7a2	Cytochrome c oxidase subunit 7A2, mitochondrial	1	LFQEDNGMPVHLK	LFQEDNGMPVHLK	3	LFQEDNGMPVHLK3	249936	241445	223414
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	LFQEEFPGIPYPPDAAVECHR	LFQEEFPGIPYPPDAAVEC(UniMod:4)HR	3	LFQEEFPGIPYPPDAAVEC(UniMod:4)HR3	2.03427e+06	2.08222e+06	2.13217e+06
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	LFQEEFPGIPYPPDAAVECHR	LFQEEFPGIPYPPDAAVEC(UniMod:4)HR	4	LFQEEFPGIPYPPDAAVEC(UniMod:4)HR4	33733	31020	50058.1
P07154	P07154	CATL1_RAT	Ctsl	Procathepsin L	1	LFQEPLMLQIPK	LFQEPLMLQIPK	2	LFQEPLMLQIPK2	3115.42		
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	LFQFIGR	LFQFIGR	2	LFQFIGR2	21125	20092.7	24477.3
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	LFQFLQADPHNSLGK	LFQFLQADPHNSLGK	3	LFQFLQADPHNSLGK3	12389.1	22354.2	14048.9
A0A8I5ZS67	A0A8I5ZS67	A0A8I5ZS67_RAT	Gigyf2	GRB10 interacting GYF protein 2	1	LFQGVNK	LFQGVNK	2	LFQGVNK2	9369.23	8889.76	10459.2
Q8R5M3	Q8R5M3	LRC15_RAT	Lrrc15	Leucine-rich repeat-containing protein 15	1	LFQHLGNLQVLR	LFQHLGNLQVLR	3	LFQHLGNLQVLR3	1632.93	4710.37	4811.41
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	LFQHPSMAIVK	LFQHPSMAIVK	3	LFQHPSMAIVK3	21261.1	16966.2	31887.4
Q11205	Q11205	SIA4B_RAT	St3gal2	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2	1	LFQIVPGENPYR	LFQIVPGENPYR	2	LFQIVPGENPYR2	23306.1	19379	26040.1
Q6AXM5	Q6AXM5	CEPT1_RAT	Cept1	Choline/ethanolaminephosphotransferase 1	1	LFQLPTPPLSR	LFQLPTPPLSR	2	LFQLPTPPLSR2	101729	88699	89022
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	LFQLQMCEYLIK	LFQLQMC(UniMod:4)EYLIK	2	LFQLQMC(UniMod:4)EYLIK2	38435.5	25854.6	19496.8
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	LFQLTEK	LFQLTEK	2	LFQLTEK2	54855.3	45545.6	56234.6
F7FPK8	F7FPK8	F7FPK8_RAT	Lman2	Lectin, mannose-binding 2	1	LFQLTVER	LFQLTVER	2	LFQLTVER2	386365	340545	348036
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	LFQPWSSLLR	LFQPWSSLLR	2	LFQPWSSLLR2	35663.9	41995.4	30521.7
Q09137	Q09137	AAPK2_RAT	Prkaa2	5'-AMP-activated protein kinase catalytic subunit alpha-2	1	LFQQILSAVDYCHR	LFQQILSAVDYC(UniMod:4)HR	3	LFQQILSAVDYC(UniMod:4)HR3	3022.3		4505.25
P54645	P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	1	LFQQILSGVDYCHR	LFQQILSGVDYC(UniMod:4)HR	2	LFQQILSGVDYC(UniMod:4)HR2	3076.17		
P54645	P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	1	LFQQILSGVDYCHR	LFQQILSGVDYC(UniMod:4)HR	3	LFQQILSGVDYC(UniMod:4)HR3	17639.9	20472.5	21502.9
B0BN85	B0BN85	SGT1_RAT	Sugt1	Protein SGT1 homolog	1	LFQQIYSDGSDEVK	LFQQIYSDGSDEVK	2	LFQQIYSDGSDEVK2	8507.47	9112.71	4221.42
B0BN85	B0BN85	SGT1_RAT	Sugt1	Protein SGT1 homolog	1	LFQQIYSDGSDEVKR	LFQQIYSDGSDEVKR	3	LFQQIYSDGSDEVKR3	4554.84	729.545	7957.93
D3ZGW2	D3ZGW2	D3ZGW2_RAT	Ap1g2	AP-1 complex subunit gamma	1	LFQQPSPYVR	LFQQPSPYVR	2	LFQQPSPYVR2	8688.62	13502.6	10807
A0A8I6AD67	A0A8I6AD67	A0A8I6AD67_RAT	Parp9	Poly [ADP-ribose] polymerase	1	LFQQVPHQFCNAVCR	LFQQVPHQFC(UniMod:4)NAVC(UniMod:4)R	3	LFQQVPHQFC(UniMod:4)NAVC(UniMod:4)R3	7455.89	5250.34	14740.3
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	LFQSNDPTLR	LFQSNDPTLR	2	LFQSNDPTLR2	139937	148104	118038
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	LFQSNDPTLRR	LFQSNDPTLRR	3	LFQSNDPTLRR3	70089.6	107560	99760
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	LFQSNDQTLR	LFQSNDQTLR	2	LFQSNDQTLR2	149453	164838	118624
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	LFQSNDQTLRR	LFQSNDQTLRR	3	LFQSNDQTLRR3	34573.4	50371	47935.2
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	LFQSVAQCCMGQK	LFQSVAQC(UniMod:4)C(UniMod:4)MGQK	2	LFQSVAQC(UniMod:4)C(UniMod:4)MGQK2	10811.4	5466.53	
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	LFQTALQEEIK	LFQTALQEEIK	2	LFQTALQEEIK2	24062.6	35163.5	19018.4
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	LFQTIQR	LFQTIQR	2	LFQTIQR2	61020.9	66714.2	54240.9
A0A8I5ZV31	A0A8I5ZV31	A0A8I5ZV31_RAT	Atp11c	Phospholipid-transporting ATPase	1	LFQTNTELLELTTK	LFQTNTELLELTTK	2	LFQTNTELLELTTK2	1685.78	2057.99	
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	LFREEFNALPACPIQATCEAASK	LFREEFNALPAC(UniMod:4)PIQATC(UniMod:4)EAASK	3	LFREEFNALPAC(UniMod:4)PIQATC(UniMod:4)EAASK3	40285	46304.4	55943.9
Q3MQ06	Q3MQ06	ATG5_RAT	Atg5	Autophagy protein 5	1	LFRPVAADGQLHTLGDLLR	LFRPVAADGQLHTLGDLLR	4	LFRPVAADGQLHTLGDLLR4	27935.6	18679.3	11617.3
O35854	O35854	BCAT2_RAT	Bcat2	Branched-chain-amino-acid aminotransferase, mitochondrial	1	LFRPWLNMDR	LFRPWLNMDR	3	LFRPWLNMDR3	229921	219837	237365
Q8CGZ2	Q8CGZ2	ADIP_RAT	Ssx2ip	Afadin- and alpha-actinin-binding protein	1	LFSAFSGSSDPDNLIVHPR	LFSAFSGSSDPDNLIVHPR	3	LFSAFSGSSDPDNLIVHPR3	4726	4587.39	6317.16
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	LFSDHEGLEDLLK	LFSDHEGLEDLLK	2	LFSDHEGLEDLLK2	3693.8		6985.69
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	LFSDHEGLEDLLK	LFSDHEGLEDLLK	3	LFSDHEGLEDLLK3	124343	127393	156814
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	LFSDLVHTTESLR	LFSDLVHTTESLR	3	LFSDLVHTTESLR3	15038.5	10054	20241.2
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	LFSEGLFSAK	LFSEGLFSAK	2	LFSEGLFSAK2	16520	22089.3	20795.3
A0A8I5ZRV3	A0A8I5ZRV3	A0A8I5ZRV3_RAT	Fam3a	FAM3 metabolism regulating signaling molecule A	1	LFSELGSR	LFSELGSR	2	LFSELGSR2	27125	20835.4	33037.9
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	LFSEVENK	LFSEVENK	2	LFSEVENK2	36053.9	33829.7	19356.9
D4A415	D4A415	D4A415_RAT	Abraxas2	Abraxas 2, BRISC complex subunit	1	LFSFYDYASK	LFSFYDYASK	2	LFSFYDYASK2	47502.1	112737	54141.7
O89035	O89035	DIC_RAT	Slc25a10	Mitochondrial dicarboxylate carrier	1	LFSGATMASSR	LFSGATMASSR	2	LFSGATMASSR2	31837	27787	19185.7
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LFSGSNTLHLVSTTK	LFSGSNTLHLVSTTK	2	LFSGSNTLHLVSTTK2	58071.8	71244.9	76550.9
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LFSGSNTLHLVSTTK	LFSGSNTLHLVSTTK	3	LFSGSNTLHLVSTTK3	678861	872007	677449
O70595	O70595	ABCB6_RAT	Abcb6	ATP-binding cassette sub-family B member 6	1	LFSHLHELSLR	LFSHLHELSLR	3	LFSHLHELSLR3	10554.4	9818.29	8656.79
Q7TNZ6	Q7TNZ6	STRAA_RAT	Strada	STE20-related kinase adapter protein alpha	1	LFSHPNIVPYR	LFSHPNIVPYR	3	LFSHPNIVPYR3	16460.7	13017	13185.7
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	LFSLTLK	LFSLTLK	2	LFSLTLK2	153627	179825	159933
Q6AYS6	Q6AYS6	SNX17_RAT	Snx17	Sorting nexin-17	1	LFSLTPAEVEQR	LFSLTPAEVEQR	2	LFSLTPAEVEQR2	24114.8	32964.5	23070.8
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	LFSPNIK	LFSPNIK	2	LFSPNIK2	41750.5	41290.8	43596.1
A0A0G2K089	A0A0G2K089	A0A0G2K089_RAT	Dennd4c	DENN domain containing 4C	1	LFSPVISR	LFSPVISR	2	LFSPVISR2	14853.9	13485.4	8530.27
Q7TP48	Q7TP48	APMAP_RAT	Apmap	Adipocyte plasma membrane-associated protein	1	LFSQETVMK	LFSQETVMK	2	LFSQETVMK2	103980	99215.6	89464.2
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	LFSQGIGGEQAQAK	LFSQGIGGEQAQAK	2	LFSQGIGGEQAQAK2	40316.4	32681.7	26947.8
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	LFSQGQDVSDK	LFSQGQDVSDK	2	LFSQGQDVSDK2	11157.3	10035.8	8543.52
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	LFSQGQDVSDKVK	LFSQGQDVSDKVK	3	LFSQGQDVSDKVK3	11177	14519.2	13265
Q5U2V1	Q5U2V1	Q5U2V1_RAT	Fkbp10	peptidylprolyl isomerase	1	LFSSHDYEAPQEITLGANK	LFSSHDYEAPQEITLGANK	3	LFSSHDYEAPQEITLGANK3	8972.76	8498.89	6425.11
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	LFSSSGLK	LFSSSGLK	2	LFSSSGLK2	25309.3	25990.5	25158.9
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	LFSSSSNAAK	LFSSSSNAAK	2	LFSSSSNAAK2	38196	46283.2	38398.5
A1L1J9	A1L1J9	LMF2_RAT	Lmf2	Lipase maturation factor 2	1	LFSSVEHLQLANSYGLFR	LFSSVEHLQLANSYGLFR	3	LFSSVEHLQLANSYGLFR3	77242.8	72993.6	95638.6
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	LFSVPDFVGDACK	LFSVPDFVGDAC(UniMod:4)K	2	LFSVPDFVGDAC(UniMod:4)K2	178066	159940	182320
Q9WUD2	Q9WUD2	TRPV2_RAT	Trpv2	Transient receptor potential cation channel subfamily V member 2	1	LFSVVSR	LFSVVSR	2	LFSVVSR2	50987.2	47859.6	45067
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	LFTAESLIGLK	LFTAESLIGLK	2	LFTAESLIGLK2	134239	129929	135066
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	LFTAESLIGLKNPEK	LFTAESLIGLKNPEK	3	LFTAESLIGLKNPEK3	15095.1	12709.9	14915.4
D3ZTD8	D3ZTD8	SEM5A_RAT	Sema5a	Semaphorin-5A	1	LFTCGTNAFTPVCTIR	LFTC(UniMod:4)GTNAFTPVC(UniMod:4)TIR	2	LFTC(UniMod:4)GTNAFTPVC(UniMod:4)TIR2	2113.9	2286.59	
Q62763	Q62762;Q62763	KC1G3_RAT	Csnk1g3	Casein kinase I isoform gamma-3	0	LFTDLFDR	LFTDLFDR	2	LFTDLFDR2	22906.7	19232.8	19450.9
Q62763	Q62763	KC1G3_RAT	Csnk1g3	Casein kinase I isoform gamma-3	1	LFTDLFDRK	LFTDLFDRK	3	LFTDLFDRK3	23254.7	22552.5	23207
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	LFTDVYGSNTALSSNGR	LFTDVYGSNTALSSNGR	2	LFTDVYGSNTALSSNGR2	29561.9	27218.4	41126.4
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	LFTFQFNNLGNTDINYIK	LFTFQFNNLGNTDINYIK	3	LFTFQFNNLGNTDINYIK3	8268.16	4692.4	10120.1
F1LUQ0	F1LUQ0	F1LUQ0_RAT	Mcub	Calcium uniporter regulatory subunit MCUb	1	LFTILHLEEVQK	LFTILHLEEVQK	3	LFTILHLEEVQK3	19546.5	4698.53	14608.5
Q7TMZ5	Q7TMZ5	Q7TMZ5_RAT	Arl6ip1	ADP-ribosylation factor like GTPase 6 interacting protein 1	1	LFTLKEEKPK	LFTLKEEKPK	3	LFTLKEEKPK3	11791.2	5652.8	10143.9
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	LFTLTALR	LFTLTALR	2	LFTLTALR2	60142.4	60803.6	60074.2
A0A0G2JTJ9	A0A0G2JTJ9	A0A0G2JTJ9_RAT	Tfcp2	Transcription factor CP2	1	LFTNFSGADLLK	LFTNFSGADLLK	2	LFTNFSGADLLK2	7275.23	4199.71	7145.1
P37727	P37727	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	1	LFTPYTEIEAENEQVEKPR	LFTPYTEIEAENEQVEKPR	3	LFTPYTEIEAENEQVEKPR3	37737	67985	38387
D3Z8L7	D3Z8L7	RRAS_RAT	Rras	Ras-related protein R-Ras	1	LFTQILR	LFTQILR	2	LFTQILR2	302074	278661	287369
Q4V8A2	Q4V8A2	CDC27_RAT	Cdc27	Cell division cycle protein 27 homolog	1	LFTSDSSTTK	LFTSDSSTTK	2	LFTSDSSTTK2	5565.04	9973.06	12854.7
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	LFTTMELMR	LFTTMELMR	2	LFTTMELMR2	75729.6	189363	113011
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	LFTTVRPLIQVQLSEEQIR	LFTTVRPLIQVQLSEEQIR	3	LFTTVRPLIQVQLSEEQIR3	6349.77	14924.2	21811.4
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	LFVALQGCMDK	LFVALQGC(UniMod:4)MDK	2	LFVALQGC(UniMod:4)MDK2	20246.8	10964.7	15790.2
P13107	P13107	CP2B3_RAT	Cyp2b3	Cytochrome P450 2B3	1	LFVATMR	LFVATMR	2	LFVATMR2	7034.99	4353.23	
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	LFVDINQGLEVVGK	LFVDINQGLEVVGK	2	LFVDINQGLEVVGK2	425390	421553	434273
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	LFVDINQGLEVVGK	LFVDINQGLEVVGK	3	LFVDINQGLEVVGK3	14092.4	8009.22	14689.5
B5DF24	B5DF24	B5DF24_RAT	Uck1	Uridine-cytidine kinase	1	LFVDTDSDVR	LFVDTDSDVR	2	LFVDTDSDVR2	5187.16		6871.63
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	LFVEALGQIGPAPPLK	LFVEALGQIGPAPPLK	2	LFVEALGQIGPAPPLK2	15740.2	23630.8	20329.6
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	LFVEALGQIGPAPPLK	LFVEALGQIGPAPPLK	3	LFVEALGQIGPAPPLK3	5591.05	6719.26	6591.83
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	LFVEPLEEFMTK	LFVEPLEEFMTK	2	LFVEPLEEFMTK2	36764.6	40111	35238.5
D3ZIN7	D3ZIN7	D3ZIN7_RAT	Mrps23	Mitochondrial ribosomal protein S23	1	LFVETGK	LFVETGK	2	LFVETGK2	14055.1	12606	5874.6
Q7TP47	Q566E4;Q7TP47;A0A8I5ZQ92	HNRPQ_RAT	Syncrip	Heterogeneous nuclear ribonucleoprotein Q	0	LFVGSIPK	LFVGSIPK	2	LFVGSIPK2	46007.9	35957.6	36964.2
D4A565	D4A565	D4A565_RAT	Ndufb5	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial	1	LFVIKPSLYYDAR	LFVIKPSLYYDAR	3	LFVIKPSLYYDAR3	22797.8	13489	26275
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	LFVLDAGASGSK	LFVLDAGASGSK	2	LFVLDAGASGSK2	9514.02	7854.43	11593.1
Q9EQS0	Q9EQS0	TALDO_RAT	Taldo1	Transaldolase	1	LFVLFGAEILK	LFVLFGAEILK	2	LFVLFGAEILK2	1601.26	3289.16	
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	LFVLLPEQSPGSYSK	LFVLLPEQSPGSYSK	2	LFVLLPEQSPGSYSK2	113612	138402	131972
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	LFVLLPEQSPGSYSK	LFVLLPEQSPGSYSK	3	LFVLLPEQSPGSYSK3	10650.8	5725.22	7098.59
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	LFVLLQTSK	LFVLLQTSK	2	LFVLLQTSK2	52456.6	66819.7	43952.7
B5DFD1	B5DFD1	B5DFD1_RAT	Nudcd1	NudC domain-containing protein 1	1	LFVLTTK	LFVLTTK	2	LFVLTTK2	31942.2	37077.8	32466.6
A0A0G2K0G9	A0A0G2K0G9	A0A0G2K0G9_RAT	Rin3	Ras and Rab interactor 3	1	LFVLVDGR	LFVLVDGR	2	LFVLVDGR2	34946.1	29793.3	30598.4
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	LFVNAQR	LFVNAQR	2	LFVNAQR2	97636	114832	128400
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	LFVPEPR	LFVPEPR	2	LFVPEPR2	47842.5	37271.2	40181.1
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	LFVQDEK	LFVQDEK	2	LFVQDEK2	45573.7	48891.1	40657.8
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	LFVQDLATR	LFVQDLATR	2	LFVQDLATR2	195303	171232	171333
Q64537	Q64537	CPNS1_RAT	Capns1	Calpain small subunit 1	1	LFVQLAGDDMEVSATELMNILNK	LFVQLAGDDMEVSATELMNILNK	3	LFVQLAGDDMEVSATELMNILNK3		45675.5	46425.1
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	LFVREPEKR	LFVREPEKR	3	LFVREPEKR3	32775.9	43362.4	39905.2
Q566R0	Q566R0	THEM4_RAT	Them4	Acyl-coenzyme A thioesterase THEM4	1	LFVSCTIQSTDEK	LFVSC(UniMod:4)TIQSTDEK	2	LFVSC(UniMod:4)TIQSTDEK2	3147.54		3187.33
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	LFVSEGSPGSLPVLAAAAR	LFVSEGSPGSLPVLAAAAR	2	LFVSEGSPGSLPVLAAAAR2	31331.9	22391	29967.3
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	LFVSEGSPGSLPVLAAAAR	LFVSEGSPGSLPVLAAAAR	3	LFVSEGSPGSLPVLAAAAR3	13677.7	10116.5	18447.5
P54311	P54311	GBB1_RAT	Gnb1	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1	1	LFVSGACDASAK	LFVSGAC(UniMod:4)DASAK	2	LFVSGAC(UniMod:4)DASAK2	530675	444954	400692
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	LFVTNDAATILR	LFVTNDAATILR	2	LFVTNDAATILR2	351118	308633	373558
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	LFVTNDAATILR	LFVTNDAATILR	3	LFVTNDAATILR3	3634.13	2147.69	6639.94
Q5FVH2	Q5FVH2	PLD3_RAT	Pld3	5'-3' exonuclease PLD3	1	LFVVPADEAQAR	LFVVPADEAQAR	2	LFVVPADEAQAR2	8054.86	9085.48	8722.65
Q6AXM8	Q6AXM8	PON2_RAT	Pon2	Serum paraoxonase/arylesterase 2	1	LFVYDPNHPPSSEVLR	LFVYDPNHPPSSEVLR	3	LFVYDPNHPPSSEVLR3	126224	131741	148667
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	LFVYGTR	LFVYGTR	2	LFVYGTR2	75955.1	59696.3	46175.9
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	LFWADLK	LFWADLK	2	LFWADLK2	122192	126815	141776
P98166	P98166	VLDLR_RAT	Vldlr	Very low-density lipoprotein receptor	1	LFWADLSQK	LFWADLSQK	2	LFWADLSQK2	20069	23411.7	21116
A0A0G2K0H3	A0A0G2K0H3	A0A0G2K0H3_RAT	Lrp6	Low-density lipoprotein receptor-related protein	1	LFWADSDLR	LFWADSDLR	2	LFWADSDLR2	4341.76		
P23764	P23764	GPX3_RAT	Gpx3	Glutathione peroxidase 3	1	LFWEPMK	LFWEPMK	1	LFWEPMK1	166631	156332	141832
P23764	P23764	GPX3_RAT	Gpx3	Glutathione peroxidase 3	1	LFWEPMK	LFWEPMK	2	LFWEPMK2	3.65609e+07	3.61994e+07	3.95334e+07
P23764	P23764	GPX3_RAT	Gpx3	Glutathione peroxidase 3	1	LFWEPMKIHDIR	LFWEPMKIHDIR	3	LFWEPMKIHDIR3	13009.8	6578.24	11247.1
P23764	P23764	GPX3_RAT	Gpx3	Glutathione peroxidase 3	1	LFWEPMKIHDIR	LFWEPMKIHDIR	4	LFWEPMKIHDIR4	13426.3	17963.3	19107.4
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	LFWLMALADSK	LFWLMALADSK	2	LFWLMALADSK2	5057.36	11533.9	6408.7
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	LFWPFSK	LFWPFSK	2	LFWPFSK2	84374.9	134692	112806
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	LFWTGDPHLIK	LFWTGDPHLIK	3	LFWTGDPHLIK3	7230.53	4620.06	9312.15
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	LFYEDGSGEK	LFYEDGSGEK	2	LFYEDGSGEK2	66396.5	60734	69963
Q9Z244	Q9Z244	GMPR1_RAT	Gmpr	GMP reductase 1	1	LFYGMSSDTAMK	LFYGMSSDTAMK	2	LFYGMSSDTAMK2	109708	97665	124288
P97849	G3V7V3;P97849	S27A1_RAT	Slc27a1	Long-chain fatty acid transport protein 1	0	LFYIYTSGTTGLPK	LFYIYTSGTTGLPK	2	LFYIYTSGTTGLPK2	31086.9	34985.2	28836.3
D3ZCD0	D3ZCD0	D3ZCD0_RAT	Tek	receptor protein-tyrosine kinase	1	LFYKPVNQAWK	LFYKPVNQAWK	3	LFYKPVNQAWK3	32557.2	22837	28471
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	LFYLALPPTVYEAVTK	LFYLALPPTVYEAVTK	2	LFYLALPPTVYEAVTK2	153225	130473	100544
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	LFYLALPPTVYEAVTK	LFYLALPPTVYEAVTK	3	LFYLALPPTVYEAVTK3	7932.96	15222.5	14249
A0A8I6AQB7	A0A8I6AQB7	A0A8I6AQB7_RAT	Opa3	Optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)	1	LFYLGIR	LFYLGIR	2	LFYLGIR2	24720.5	28727	22501.6
P14604	P14604	ECHM_RAT	Echs1	Enoyl-CoA hydratase, mitochondrial	1	LFYSTFATDDRR	LFYSTFATDDRR	3	LFYSTFATDDRR3	112781	120566	143106
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	LFYSVLMSNVEK	LFYSVLMSNVEK	2	LFYSVLMSNVEK2	52711.8	53119.1	36745.2
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	LFYVPQRPYMTLGTLR	LFYVPQRPYMTLGTLR	3	LFYVPQRPYMTLGTLR3	122862	152565	151819
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	LGAAPEEESAYVAGER	LGAAPEEESAYVAGER	2	LGAAPEEESAYVAGER2	115252	96277.3	105038
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	LGAAPEEESAYVAGER	LGAAPEEESAYVAGER	3	LGAAPEEESAYVAGER3	12363.9	21900	15734.4
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	LGAASLGAEDPETQVVLINAVK	LGAASLGAEDPETQVVLINAVK	3	LGAASLGAEDPETQVVLINAVK3	843073	813719	804191
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	LGAASLGAEDPETQVVLINAVK	LGAASLGAEDPETQVVLINAVK	4	LGAASLGAEDPETQVVLINAVK4	4354.45	1657.07	
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	LGAASLGAEDPETQVVLINAVKDVAK	LGAASLGAEDPETQVVLINAVKDVAK	3	LGAASLGAEDPETQVVLINAVKDVAK3	6002.82		6101.96
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	LGADDLEGEAFLPLCR	LGADDLEGEAFLPLC(UniMod:4)R	2	LGADDLEGEAFLPLC(UniMod:4)R2	26066	32788.1	26248.5
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	LGADDLEGEAFLPLCR	LGADDLEGEAFLPLC(UniMod:4)R	3	LGADDLEGEAFLPLC(UniMod:4)R3	23740.3	26626.8	36750.2
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	LGADESEEEGR	LGADESEEEGR	2	LGADESEEEGR2	25021.2	18471.9	23873.1
B2GUZ6	B2GUZ6	B2GUZ6_RAT	Rtn4ip1	Reticulon 4 interacting protein 1	1	LGADEVIDYTMGSVEEQLK	LGADEVIDYTMGSVEEQLK	3	LGADEVIDYTMGSVEEQLK3	4072.73		3734.82
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	LGADMEDLR	LGADMEDLR	2	LGADMEDLR2	199002	225949	201740
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	LGADMEDLRNR	LGADMEDLRNR	2	LGADMEDLRNR2	92403.5	52976.6	43058.1
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	LGADMEDLRNR	LGADMEDLRNR	3	LGADMEDLRNR3	2.30701e+06	2.63947e+06	2.09486e+06
D4A731	D4A731	D4A731_RAT	Ankib1	RBR-type E3 ubiquitin transferase	1	LGADSDPFSTDTLSSR	LGADSDPFSTDTLSSR	2	LGADSDPFSTDTLSSR2	3091.88		4550.74
D4A731	D4A731	D4A731_RAT	Ankib1	RBR-type E3 ubiquitin transferase	1	LGADSDPFSTDTLSSRPLSETR	LGADSDPFSTDTLSSRPLSETR	3	LGADSDPFSTDTLSSRPLSETR3	18202.4	18934.2	16842.2
Q6P6R2	Q6P6R2	DLDH_RAT	Dld	Dihydrolipoyl dehydrogenase, mitochondrial	1	LGADVTAVEFLGHVGGIGIDMEISK	LGADVTAVEFLGHVGGIGIDMEISK	3	LGADVTAVEFLGHVGGIGIDMEISK3	14321.5	22718.8	12236
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	LGAEDPWYCPNCK	LGAEDPWYC(UniMod:4)PNC(UniMod:4)K	2	LGAEDPWYC(UniMod:4)PNC(UniMod:4)K2	64648.5	82230.8	76914.5
P97711	P97711	GRK6_RAT	Grk6	G protein-coupled receptor kinase 6	1	LGAGMLEPPFKPDPQAIYCK	LGAGMLEPPFKPDPQAIYC(UniMod:4)K	3	LGAGMLEPPFKPDPQAIYC(UniMod:4)K3	34401.1	40373.4	26627.8
D3Z8E0	D3Z8E0	D3Z8E0_RAT	Rps6ka3	Ribosomal protein S6 kinase	1	LGAGPDGVEEIKR	LGAGPDGVEEIKR	3	LGAGPDGVEEIKR3	17094.9	14989.9	
P67999	P67999	KS6B1_RAT	Rps6kb1	Ribosomal protein S6 kinase beta-1	1	LGAGPGDAGEVQAHPFFR	LGAGPGDAGEVQAHPFFR	3	LGAGPGDAGEVQAHPFFR3	14609.2	11562.4	6679.1
D3ZSB7	D3ZSB7	D3ZSB7_RAT	Rps6ka4	Ribosomal protein S6 kinase	1	LGAGPQGAQEVK	LGAGPQGAQEVK	2	LGAGPQGAQEVK2		3606.9	
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	LGAGPSSCR	LGAGPSSC(UniMod:4)R	2	LGAGPSSC(UniMod:4)R2	235218	284528	246303
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	LGAGQFGEVWMGYYNNSTK	LGAGQFGEVWMGYYNNSTK	3	LGAGQFGEVWMGYYNNSTK3	137352	142740	150943
P97531	P97531	CIP4_RAT	Trip10	Cdc42-interacting protein 4	1	LGAGYGLLSEAELQVVPIIGK	LGAGYGLLSEAELQVVPIIGK	3	LGAGYGLLSEAELQVVPIIGK3	1159.14	4393.16	2212.17
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	LGAIHSLVYK	LGAIHSLVYK	2	LGAIHSLVYK2	9959.07		4298.64
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	LGAILTPNDGR	LGAILTPNDGR	2	LGAILTPNDGR2	360733	345099	401912
O35314	O35314	SCG1_RAT	Chgb	Secretogranin-1	1	LGALFNPYFDPLQWK	LGALFNPYFDPLQWK	2	LGALFNPYFDPLQWK2	22323.4	25076	15417.9
F7FI79	F7FI79	F7FI79_RAT	Fhip2b	FHF complex subunit HOOK interacting protein 2B	1	LGALLQEAVGAR	LGALLQEAVGAR	2	LGALLQEAVGAR2	19594	16706.8	19810.2
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	LGALNSSLLLLEDR	LGALNSSLLLLEDR	2	LGALNSSLLLLEDR2	2851.08	2562.18	
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	LGALPPAFSTR	LGALPPAFSTR	2	LGALPPAFSTR2	298263	288977	291872
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	LGALPPDISTLGSLR	LGALPPDISTLGSLR	2	LGALPPDISTLGSLR2	122628	114559	146311
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	LGALQGDPDALNLYR	LGALQGDPDALNLYR	2	LGALQGDPDALNLYR2	13096.7	11790.3	12959.1
A0A8I6G1H3	A0A8I6G1H3	A0A8I6G1H3_RAT	Irak4	Interleukin-1 receptor-associated kinase 4	1	LGAMVEISTEELK	LGAMVEISTEELK	2	LGAMVEISTEELK2	20809.5	26756.6	
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	LGANSGLHIIIFDEIDAICK	LGANSGLHIIIFDEIDAIC(UniMod:4)K	3	LGANSGLHIIIFDEIDAIC(UniMod:4)K3	8811.55	7466.58	
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	LGANSLLDLVVFGR	LGANSLLDLVVFGR	2	LGANSLLDLVVFGR2	12944.5	13673.2	16664.9
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	LGANSLLDLVVFGR	LGANSLLDLVVFGR	3	LGANSLLDLVVFGR3	1520.43	5098.01	1307.9
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	LGAPALTSR	LGAPALTSR	2	LGAPALTSR2	102947	80878	99834.1
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	LGAPLGTFHASLLHCLLPQLSSPR	LGAPLGTFHASLLHC(UniMod:4)LLPQLSSPR	4	LGAPLGTFHASLLHC(UniMod:4)LLPQLSSPR4	49087.6	28782.1	16085
B0BNL6	B0BNL6	ARRD1_RAT	Arrdc1	Arrestin domain-containing protein 1	1	LGAPLPFR	LGAPLPFR	2	LGAPLPFR2	16908.5	5508.5	16771.5
A0A8I5Y7I2	A0A8I5Y7I2	A0A8I5Y7I2_RAT	Kctd12	Potassium channel tetramerization domain containing 12	1	LGAPQQPGPGPPPPHSR	LGAPQQPGPGPPPPHSR	2	LGAPQQPGPGPPPPHSR2	20573.4	3716.07	9325.93
A0A8I5Y7I2	A0A8I5Y7I2	A0A8I5Y7I2_RAT	Kctd12	Potassium channel tetramerization domain containing 12	1	LGAPQQPGPGPPPPHSR	LGAPQQPGPGPPPPHSR	3	LGAPQQPGPGPPPPHSR3	215293	180530	221135
Q4FZY0	D4A9T5;Q4FZY0	EFHD2_RAT	Efhd2	EF-hand domain-containing protein D2	0	LGAPQTHLGLK	LGAPQTHLGLK	2	LGAPQTHLGLK2	14693.6	11688	9449
B2RYB1	B2RYB1	B2RYB1_RAT	Txndc11	Thioredoxin domain containing 11	1	LGAPSSAPVK	LGAPSSAPVK	2	LGAPSSAPVK2	14414.3	10501.1	8325.92
P52303	P52303	AP1B1_RAT	Ap1b1	AP-1 complex subunit beta-1	1	LGAPVSSGLSDLFDLTSGVGTLSGSYVAPK	LGAPVSSGLSDLFDLTSGVGTLSGSYVAPK	3	LGAPVSSGLSDLFDLTSGVGTLSGSYVAPK3	17538.8	23670.3	20395.3
Q6AY23	Q6AY23;D3ZXI0	P5CR2_RAT	Pycr2	Pyrroline-5-carboxylate reductase 2	0	LGAQALLGAAK	LGAQALLGAAK	2	LGAQALLGAAK2	31602.5	27871.6	33909.3
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	LGAQSIQPTANLDR	LGAQSIQPTANLDR	2	LGAQSIQPTANLDR2	26148.6	22350.8	30160.5
Q6AYS8	Q6AYS8	DHB11_RAT	Hsd17b11	Estradiol 17-beta-dehydrogenase 11	1	LGAQVHPFVVDCSQR	LGAQVHPFVVDC(UniMod:4)SQR	3	LGAQVHPFVVDC(UniMod:4)SQR3	6519.38	4078.66	
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	LGASALDSIQEFR	LGASALDSIQEFR	2	LGASALDSIQEFR2	10157.2	11299.2	17285.1
Q63448	Q63448	ACOX3_RAT	Acox3	Peroxisomal acyl-coenzyme A oxidase 3	1	LGASLGSLSSGR	LGASLGSLSSGR	2	LGASLGSLSSGR2	5942.77	7774.15	11841.4
O54715	O54715	VAS1_RAT	Atp6ap1	V-type proton ATPase subunit S1	1	LGASPLHVDLATLK	LGASPLHVDLATLK	3	LGASPLHVDLATLK3	39017.9	52325.5	49402.4
Q63159	Q63159	COQ3_RAT	Coq3	Ubiquinone biosynthesis O-methyltransferase, mitochondrial	1	LGASVVGIDPVAENIK	LGASVVGIDPVAENIK	2	LGASVVGIDPVAENIK2	12579.4	13739.2	
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	LGATAEK	LGATAEK	1	LGATAEK1			17027
Q63486	Q63486	RRAGA_RAT	Rraga	Ras-related GTP-binding protein A	1	LGATIDVEHSHVR	LGATIDVEHSHVR	3	LGATIDVEHSHVR3	25578.5	7405.89	16690.3
Q8R4A1	Q8R4A1	ERO1A_RAT	Ero1a	ERO1-like protein alpha	1	LGAVDESLSEETQK	LGAVDESLSEETQK	2	LGAVDESLSEETQK2	45397.5	39217	35211.2
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	LGAVGGTGFK	LGAVGGTGFK	2	LGAVGGTGFK2	30671	19313.5	33637.2
A0A8I5YC01	A0A8I5YC01	A0A8I5YC01_RAT	Gimap1	GTPase, IMAP family member 1	1	LGAVPVTR	LGAVPVTR	2	LGAVPVTR2	53131.4	52728.7	34699.6
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	LGAVTVK	LGAVTVK	1	LGAVTVK1	1686.37	4044.43	4031.12
A0A8I5ZP57	A0A8I5ZP57	A0A8I5ZP57_RAT	Pkdcc	Protein kinase domain containing, cytoplasmic	1	LGCAALR	LGC(UniMod:4)AALR	2	LGC(UniMod:4)AALR2	136023	150108	118234
P18297	P18297	SPRE_RAT	Spr	Sepiapterin reductase	1	LGCAVCVLTGASR	LGC(UniMod:4)AVC(UniMod:4)VLTGASR	2	LGC(UniMod:4)AVC(UniMod:4)VLTGASR2	5232.09		5614.6
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	LGCDWVATIFSR	LGC(UniMod:4)DWVATIFSR	2	LGC(UniMod:4)DWVATIFSR2	177611	167303	198580
P35704	P35704	PRDX2_RAT	Prdx2	Peroxiredoxin-2	1	LGCEVLGVSVDSQFTHLAWINTPR	LGC(UniMod:4)EVLGVSVDSQFTHLAWINTPR	3	LGC(UniMod:4)EVLGVSVDSQFTHLAWINTPR3	32179.4	31358.8	24951.4
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	LGCFDHAQR	LGC(UniMod:4)FDHAQR	2	LGC(UniMod:4)FDHAQR2	34264.2	37586.4	41682.5
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	LGCFEIAK	LGC(UniMod:4)FEIAK	2	LGC(UniMod:4)FEIAK2	71328.8	72222	62498.9
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	LGCFNLFSK	LGC(UniMod:4)FNLFSK	2	LGC(UniMod:4)FNLFSK2	22786.5	27255.9	30282.3
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	LGCGEGGCGACTVMISK	LGC(UniMod:4)GEGGC(UniMod:4)GAC(UniMod:4)TVMISK	2	LGC(UniMod:4)GEGGC(UniMod:4)GAC(UniMod:4)TVMISK2	21535.5	26926.2	25403.2
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	LGCGGILVFQDPADAK	LGC(UniMod:4)GGILVFQDPADAK	2	LGC(UniMod:4)GGILVFQDPADAK2	11785.6	15212.1	12993.8
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	LGCGILNYR	LGC(UniMod:4)GILNYR	2	LGC(UniMod:4)GILNYR2	22323.1	18342.9	28927.5
P05696	P68403;P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	0	LGCGPEGER	LGC(UniMod:4)GPEGER	2	LGC(UniMod:4)GPEGER2		419105	448362
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	LGCGPEGERDVR	LGC(UniMod:4)GPEGERDVR	3	LGC(UniMod:4)GPEGERDVR3	225122	284846	414348
F1M7Y5	F1M7Y5	KPCI_RAT	Prkci	Protein kinase C iota type	1	LGCHPQTGFADIQGHPFFR	LGC(UniMod:4)HPQTGFADIQGHPFFR	4	LGC(UniMod:4)HPQTGFADIQGHPFFR4	10565.4	12975.6	2288.67
Q09326	Q09326	MGAT2_RAT	Mgat2	Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	1	LGCINAEYPDSFGHYR	LGC(UniMod:4)INAEYPDSFGHYR	3	LGC(UniMod:4)INAEYPDSFGHYR3	30894.9	26337.1	29488.2
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	LGCKPFK	LGC(UniMod:4)KPFK	2	LGC(UniMod:4)KPFK2	31504.5	35496	25523.7
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	LGCLIWEVFNGSLPR	LGC(UniMod:4)LIWEVFNGSLPR	2	LGC(UniMod:4)LIWEVFNGSLPR2	2090.05	7403.1	3193.43
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	LGCLLAR	LGC(UniMod:4)LLAR	2	LGC(UniMod:4)LLAR2	28006	31326.9	18639.7
M0RDU0	M0RDU0	HAP40_RAT	F8a1	40-kDa huntingtin-associated protein	1	LGCPAAYGEPLQAAASALGAAVR	LGC(UniMod:4)PAAYGEPLQAAASALGAAVR	3	LGC(UniMod:4)PAAYGEPLQAAASALGAAVR3		57381.4	
Q62833	Q62833	GRK5_RAT	Grk5	G protein-coupled receptor kinase 5	1	LGCQEEGAAEVK	LGC(UniMod:4)QEEGAAEVK	2	LGC(UniMod:4)QEEGAAEVK2	4089.45	5331.77	2340.23
P24062	P24062	IGF1R_RAT	Igf1r	Insulin-like growth factor 1 receptor	1	LGCSASNFVFAR	LGC(UniMod:4)SASNFVFAR	2	LGC(UniMod:4)SASNFVFAR2	3560.17	4786.15	3506.64
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	LGCSLNQNSVPDIR	LGC(UniMod:4)SLNQNSVPDIR	2	LGC(UniMod:4)SLNQNSVPDIR2	10053.6	13310.8	7371.67
P63144	P63144	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	1	LGCTLPQLAVAWCLR	LGC(UniMod:4)TLPQLAVAWC(UniMod:4)LR	2	LGC(UniMod:4)TLPQLAVAWC(UniMod:4)LR2	44701.4	31932.2	23918.9
P63144	P63144	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	1	LGCTLPQLAVAWCLR	LGC(UniMod:4)TLPQLAVAWC(UniMod:4)LR	3	LGC(UniMod:4)TLPQLAVAWC(UniMod:4)LR3	5759.02	5229	4772.91
B5DEH0	B5DEH0	LIMD1_RAT	Limd1	LIM domain-containing protein 1	1	LGCVESGTSPK	LGC(UniMod:4)VESGTSPK	2	LGC(UniMod:4)VESGTSPK2	4870.56	723.619	
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	LGCYFCNDVVAPGDSTR	LGC(UniMod:4)YFC(UniMod:4)NDVVAPGDSTR	2	LGC(UniMod:4)YFC(UniMod:4)NDVVAPGDSTR2	35365.1	41777.8	35398.5
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	LGCYFCNDVVAPGDSTR	LGC(UniMod:4)YFC(UniMod:4)NDVVAPGDSTR	3	LGC(UniMod:4)YFC(UniMod:4)NDVVAPGDSTR3	3535.7	5279.47	1493.27
M0RD40	M0RD40	M0RD40_RAT	Sik3	non-specific serine/threonine protein kinase	1	LGDADPNFER	LGDADPNFER	2	LGDADPNFER2	20063.8	24819.7	13524.5
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	LGDASIAAPFTSK	LGDASIAAPFTSK	2	LGDASIAAPFTSK2	14726.3	10703.7	11298.9
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	LGDAVEQGVINNSVLGYFIGR	LGDAVEQGVINNSVLGYFIGR	3	LGDAVEQGVINNSVLGYFIGR3	6188.18	6032.33	9166.95
Q5M9G3	Q5M9G3	CAPR1_RAT	Caprin1	Caprin-1	1	LGDDDVR	LGDDDVR	2	LGDDDVR2	123794		130627
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	LGDDIDLIVR	LGDDIDLIVR	2	LGDDIDLIVR2	181202	166735	134902
Q792S6	Q792S6	BOK_RAT	Bok	Bcl-2-related ovarian killer protein	1	LGDELEQIRPSVYR	LGDELEQIRPSVYR	3	LGDELEQIRPSVYR3	22668.1	21121.7	16240.3
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	LGDEVLK	LGDEVLK	2	LGDEVLK2	18182.9	20609.2	17989.7
F1M9D0	B5DF98;F1M9D0	F1M9D0_RAT	Map3k2	Mitogen activated protein kinase kinase kinase 2	0	LGDFGASK	LGDFGASK	2	LGDFGASK2		17545.6	13419.7
P70600	O35346;P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	0	LGDFGLSR	LGDFGLSR	2	LGDFGLSR2	98861.4	99248.7	90577
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	LGDGEAFFLK	LGDGEAFFLK	2	LGDGEAFFLK2	48267.8	45717.8	44934.5
Q68FX0	Q68FX0	IDH3B_RAT	Idh3B	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	LGDGLFLQCCEEVAELYPK	LGDGLFLQC(UniMod:4)C(UniMod:4)EEVAELYPK	3	LGDGLFLQC(UniMod:4)C(UniMod:4)EEVAELYPK3		4970.41	5381.73
P41565	P41565	IDHG1_RAT	Idh3g	Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial	1	LGDGLFLQCCR	LGDGLFLQC(UniMod:4)C(UniMod:4)R	2	LGDGLFLQC(UniMod:4)C(UniMod:4)R2	31670.5	24623.3	36889.1
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	LGDGLVGSR	LGDGLVGSR	2	LGDGLVGSR2	2.63926e+06	2.53142e+06	2.60375e+06
Q5U2X5	Q5U2X5	ACK1_RAT	Tnk2	Activated CDC42 kinase 1	1	LGDGSFGVVR	LGDGSFGVVR	2	LGDGSFGVVR2	5203.89	6612.32	2939.35
D4A2W1	D4A2W1	D4A2W1_RAT	Enpp4	Ectonucleotide pyrophosphatase/phosphodiesterase 4	1	LGDHGYDNSLPSMHPFLAAHGPAFR	LGDHGYDNSLPSMHPFLAAHGPAFR	4	LGDHGYDNSLPSMHPFLAAHGPAFR4	20409.4	23688.3	27455.6
P47861	P21707;P47861	SYT5_RAT	Syt5	Synaptotagmin-5	0	LGDICFSLR	LGDIC(UniMod:4)FSLR	2	LGDIC(UniMod:4)FSLR2	36851	36185	32055.3
M0RCN2	M0RCN2	M0RCN2_RAT	Tnfsf14	TNF superfamily member 14	1	LGDIVAHLPDGGK	LGDIVAHLPDGGK	3	LGDIVAHLPDGGK3	14681.7	17129.7	16213.5
D3ZBE5	P59895;D3ZBE5	NEK7_RAT	Nek7	Serine/threonine-protein kinase Nek7	0	LGDLGLGR	LGDLGLGR	2	LGDLGLGR2	5952.49	38338.4	22308
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	LGDLLISQFSGSNAEQMR	LGDLLISQFSGSNAEQMR	3	LGDLLISQFSGSNAEQMR3	15148.7	21267.4	21700.8
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	LGDLNYLIYVFPDRPK	LGDLNYLIYVFPDRPK	2	LGDLNYLIYVFPDRPK2	4727.28	11988.8	3965.67
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	LGDLNYLIYVFPDRPK	LGDLNYLIYVFPDRPK	3	LGDLNYLIYVFPDRPK3	61772.1	41817.8	58877.9
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	LGDLQADSDESQR	LGDLQADSDESQR	2	LGDLQADSDESQR2	8087.52	9843.74	12774.9
D3ZGD0	D3ZGD0	D3ZGD0_RAT	Gemin5	Gem (nuclear organelle) associated protein 5	1	LGDLSPTMAAFK	LGDLSPTMAAFK	2	LGDLSPTMAAFK2			3715.13
P31000	P31000	VIME_RAT	Vim	Vimentin	1	LGDLYEEEMR	LGDLYEEEMR	2	LGDLYEEEMR2	22169.9	21583.9	21284.4
O70351	O70351	HCD2_RAT	Hsd17b10	3-hydroxyacyl-CoA dehydrogenase type-2	1	LGDPAEYAHLVQMVIENPFLNGEVIR	LGDPAEYAHLVQMVIENPFLNGEVIR	3	LGDPAEYAHLVQMVIENPFLNGEVIR3		11265.5	
Q6QI44	Q6QI44	NAA25_RAT	Naa25	N-alpha-acetyltransferase 25, NatB auxiliary subunit	1	LGDPEELMFQYFK	LGDPEELMFQYFK	2	LGDPEELMFQYFK2	6164.07	6232.74	6180.64
A0A8I5ZVJ7	A0A8I5ZVJ7	A0A8I5ZVJ7_RAT	ENSRNOG00000066812	Ig-like domain-containing protein	1	LGDQASISCR	LGDQASISC(UniMod:4)R	2	LGDQASISC(UniMod:4)R2	13000.1	6334.9	4579.73
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	LGDQHAGLPALAPIPPAEVSGLEIR	LGDQHAGLPALAPIPPAEVSGLEIR	3	LGDQHAGLPALAPIPPAEVSGLEIR3	79987.1	108988	96836
Q6AY04	Q6AY04	MAIP1_RAT	Maip1	m-AAA protease-interacting protein 1, mitochondrial	1	LGDQSVETK	LGDQSVETK	2	LGDQSVETK2	14483.8	12092.4	8617.01
B2RYI0	B2RYI0	WDR91_RAT	Wdr91	WD repeat-containing protein 91	1	LGDSELALVCSQRPASLSQSPR	LGDSELALVC(UniMod:4)SQRPASLSQSPR	3	LGDSELALVC(UniMod:4)SQRPASLSQSPR3	11032	18885.7	16848.2
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	LGDSESQGPDAEDLGDDPSQR	LGDSESQGPDAEDLGDDPSQR	3	LGDSESQGPDAEDLGDDPSQR3	8827.58	18223.8	14063.5
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LGDSHDLQR	LGDSHDLQR	2	LGDSHDLQR2	88727.9	85577	94996
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	LGDSSSAPLLLTQSEGTDLSSR	LGDSSSAPLLLTQSEGTDLSSR	3	LGDSSSAPLLLTQSEGTDLSSR3	4649.9	3151.87	
Q6P686	Q6P686	OSTF1_RAT	Ostf1	Osteoclast-stimulating factor 1	1	LGDTALHAAAWK	LGDTALHAAAWK	2	LGDTALHAAAWK2	29305.9	29818.4	22666.3
Q6P686	Q6P686	OSTF1_RAT	Ostf1	Osteoclast-stimulating factor 1	1	LGDTALHAAAWK	LGDTALHAAAWK	3	LGDTALHAAAWK3	429336	486618	504476
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	LGDTPGVSYSDIAAR	LGDTPGVSYSDIAAR	2	LGDTPGVSYSDIAAR2	32790.4	37488.5	35044.1
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	LGDVILPPWAK	LGDVILPPWAK	2	LGDVILPPWAK2	9497.03	23498	7066.81
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	LGDVISIQPCPDVK	LGDVISIQPC(UniMod:4)PDVK	2	LGDVISIQPC(UniMod:4)PDVK2	1.3721e+06	1.38219e+06	1.45851e+06
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	LGDVISIQPCPDVK	LGDVISIQPC(UniMod:4)PDVK	3	LGDVISIQPC(UniMod:4)PDVK3	53625	49033	70685.3
D3ZXT7	D3ZXT7	D3ZXT7_RAT	Timd4	T-cell immunoglobulin and mucin domain containing 4	1	LGDVSLTISNTNQDDSGVYCCR	LGDVSLTISNTNQDDSGVYC(UniMod:4)C(UniMod:4)R	3	LGDVSLTISNTNQDDSGVYC(UniMod:4)C(UniMod:4)R3	14270.6	12317.9	15052.5
P16617	Q5XIV1;P16617;M0R6Y8	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	0	LGDVYVNDAFGTAHR	LGDVYVNDAFGTAHR	2	LGDVYVNDAFGTAHR2	11757.4	11250.2	15571.6
P16617	Q5XIV1;P16617;M0R6Y8	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	0	LGDVYVNDAFGTAHR	LGDVYVNDAFGTAHR	3	LGDVYVNDAFGTAHR3	125705	128754	117215
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	LGDYGLAK	LGDYGLAK	2	LGDYGLAK2	50998.1	59634.2	59572.1
Q80Z70	Q80Z70	SE1L1_RAT	Sel1l	Protein sel-1 homolog 1	1	LGDYHFYGFGTDVDYETAFIHYR	LGDYHFYGFGTDVDYETAFIHYR	4	LGDYHFYGFGTDVDYETAFIHYR4	3454.83	3868.05	4204.57
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	LGDYLLESANK	LGDYLLESANK	2	LGDYLLESANK2	171391	156604	174830
D3ZTC4	D3ZTC4	D3ZTC4_RAT	Ccdc88b	Coiled-coil domain containing 88B	1	LGEAHADLDSLR	LGEAHADLDSLR	3	LGEAHADLDSLR3	7984.32	10591.8	15275
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	LGEASDSELADADK	LGEASDSELADADK	2	LGEASDSELADADK2	11834.6	14720.3	11855.7
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	LGEDESLLMK	LGEDESLLMK	2	LGEDESLLMK2	27002.3	23987.7	14981.1
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	LGEDHRSCSPSDK	LGEDHRSC(UniMod:4)SPSDK	3	LGEDHRSC(UniMod:4)SPSDK3			12230.4
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LGEDLSK	LGEDLSK	1	LGEDLSK1	1512.31	622.296	941.22
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LGEDLSK	LGEDLSK	2	LGEDLSK2	321296	424904	371569
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	LGEDPLSR	LGEDPLSR	2	LGEDPLSR2	108490	86415.2	98653.3
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	LGEGAVLSMVDR	LGEGAVLSMVDR	2	LGEGAVLSMVDR2	680731	600712	737281
B1H267	A0A8I5ZS69;B1H267	SNX5_RAT	Snx5	Sorting nexin-5	0	LGEGEGSMTK	LGEGEGSMTK	2	LGEGEGSMTK2	183223	205076	208089
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	LGEGKLPEK	LGEGKLPEK	2	LGEGKLPEK2	20961.2	24464.1	19388.9
F1LU14	F1LU14	F1LU14_RAT	Snx32	Sorting nexin	1	LGEGNSSITR	LGEGNSSITR	2	LGEGNSSITR2	9829.91	7307.83	4139.39
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	LGEGSYGSVFK	LGEGSYGSVFK	2	LGEGSYGSVFK2	68960.2	69143.5	85063.9
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	LGEGSYGSVYK	LGEGSYGSVYK	2	LGEGSYGSVYK2	91457.5	90531.3	43180
Q63686	Q63686;O35831	CDK16_RAT	Cdk16	Cyclin-dependent kinase 16	0	LGEGTYATVYK	LGEGTYATVYK	2	LGEGTYATVYK2	6110.03	10707	7347.88
Q05764	Q05764	ADDB_RAT	Add2	Beta-adducin	1	LGEHEFEALMR	LGEHEFEALMR	3	LGEHEFEALMR3		4014.69	3086.02
P00762	P00762	TRY1_RAT	Prss1	Serine protease 1	1	LGEHNINVLEGDEQFINAAK	LGEHNINVLEGDEQFINAAK	3	LGEHNINVLEGDEQFINAAK3	59567.6	31483	35060.9
P84083	P61206;P84082;P84083;P61751;P84079	ARF5_RAT	Arf5	ADP-ribosylation factor 5	0	LGEIVTTIPTIGFNVETVEYK	LGEIVTTIPTIGFNVETVEYK	3	LGEIVTTIPTIGFNVETVEYK3	33321.1	33495	30578.9
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	LGEKEETIPPDYR	LGEKEETIPPDYR	3	LGEKEETIPPDYR3	13300.3	16861.8	16547.9
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	LGELCVDPR	LGELC(UniMod:4)VDPR	2	LGELC(UniMod:4)VDPR2	13013.1	17323.8	15560
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LGELKEQYAASLAQSEAK	LGELKEQYAASLAQSEAK	3	LGELKEQYAASLAQSEAK3	7943.58	10803.2	11485.1
G3V9M3	G3V9M3	G3V9M3_RAT	Wdr47	WD repeat domain 47	1	LGELNIGMDSLGNEVPVLNQQCLGSK	LGELNIGMDSLGNEVPVLNQQC(UniMod:4)LGSK	3	LGELNIGMDSLGNEVPVLNQQC(UniMod:4)LGSK3	8616.11	7120.51	6762.27
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	LGELQER	LGELQER	2	LGELQER2	109030	126088	152369
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	LGELTDLHGLR	LGELTDLHGLR	2	LGELTDLHGLR2	13094.6	17378	9353.95
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	LGELTDLHGLR	LGELTDLHGLR	3	LGELTDLHGLR3	271193	240711	234603
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	LGELTDLHGLRR	LGELTDLHGLRR	3	LGELTDLHGLRR3	106208	150511	169103
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	LGELTLHLMASAGK	LGELTLHLMASAGK	3	LGELTLHLMASAGK3	1541.3		8758.55
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	LGELTVTGVTPDSLR	LGELTVTGVTPDSLR	2	LGELTVTGVTPDSLR2	27608.5	27452.3	25582.7
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	LGELVDGLVVPSALVTAILEAPVTEPR	LGELVDGLVVPSALVTAILEAPVTEPR	3	LGELVDGLVVPSALVTAILEAPVTEPR3	2288.57		
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	LGELWVTEPTTDSLR	LGELWVTEPTTDSLR	2	LGELWVTEPTTDSLR2	9318.54	10735.3	12266.9
P63159	A0A8I6GBU6;A0A8I6GKR4;P63159;A0A8I6GJ73;A0A8I5Y7D7;A0A0G2K6P4	HMGB1_RAT	Hmgb1	High mobility group protein B1	0	LGEMWNNTAADDKQPYEK	LGEMWNNTAADDKQPYEK	3	LGEMWNNTAADDKQPYEK3	19434.8	29105.6	22584.2
P52925	P52925;D3ZN59;D3ZS25	HMGB2_RAT	Hmgb2	High mobility group protein B2	0	LGEMWSEQSAK	LGEMWSEQSAK	2	LGEMWSEQSAK2	3681.28	3419.92	2912.72
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	LGEPSALPSTYR	LGEPSALPSTYR	2	LGEPSALPSTYR2	4872.8	8897.92	7730.77
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	LGEPSEIDQR	LGEPSEIDQR	2	LGEPSEIDQR2	19791.3	25913.2	26501.2
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LGEQLAAVHEK	LGEQLAAVHEK	2	LGEQLAAVHEK2	22631	11222.7	12555.7
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LGEQLAAVHEK	LGEQLAAVHEK	3	LGEQLAAVHEK3	173542	194297	188356
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LGEQLAAVHEKQPDVILEASGPEAIQIR	LGEQLAAVHEKQPDVILEASGPEAIQIR	4	LGEQLAAVHEKQPDVILEASGPEAIQIR4	10085.5	17526.4	16074.7
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	LGERDDTIPPEYR	LGERDDTIPPEYR	3	LGERDDTIPPEYR3	26085.3	31005.5	33877.4
A0A0G2JWV6	A0A0G2JWV6	A0A0G2JWV6_RAT	Fam219b	Family with sequence similarity 219, member B	1	LGERPLPATEK	LGERPLPATEK	3	LGERPLPATEK3	10345.6	12665.7	17600.3
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	LGESCINTVGSFR	LGESC(UniMod:4)INTVGSFR	2	LGESC(UniMod:4)INTVGSFR2	163507	102999	96587.5
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	LGESQTLLAAAVER	LGESQTLLAAAVER	2	LGESQTLLAAAVER2	7599.51	3341.38	3637.74
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LGESQTLQQFSR	LGESQTLQQFSR	2	LGESQTLQQFSR2	449063	501356	473584
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LGESQTLQQFSR	LGESQTLQQFSR	3	LGESQTLQQFSR3	12034	19658.9	14160.3
A0A8I6GK59	A0A8I6GK59	A0A8I6GK59_RAT	Bmp2k	BMP-2 inducible kinase	1	LGESTPSDK	LGESTPSDK	2	LGESTPSDK2	6940.34	13400.4	14068.8
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	LGETLQGTLCGAGPSCGLPSPSYR	LGETLQGTLC(UniMod:4)GAGPSC(UniMod:4)GLPSPSYR	3	LGETLQGTLC(UniMod:4)GAGPSC(UniMod:4)GLPSPSYR3	24538.8	30424.6	20894.8
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	LGEVALLQGNHQIVEMCYQR	LGEVALLQGNHQIVEMC(UniMod:4)YQR	3	LGEVALLQGNHQIVEMC(UniMod:4)YQR3	81912.6	85949	81991.2
D3ZQG3	D3ZQG3	D3ZQG3_RAT	Rhbdd2	Rhomboid domain containing 2	1	LGEVEDAR	LGEVEDAR	2	LGEVEDAR2	5876.57		5261.96
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	LGEVSPNLVR	LGEVSPNLVR	2	LGEVSPNLVR2	63329.6	62731.1	48868.6
Q6P7R8	Q6P7R8	DHB12_RAT	Hsd17b12	Very-long-chain 3-oxoacyl-CoA reductase	1	LGEWAVVTGGTDGIGK	LGEWAVVTGGTDGIGK	2	LGEWAVVTGGTDGIGK2	37022.4	48239.4	41047.3
Q6P7R8	Q6P7R8	DHB12_RAT	Hsd17b12	Very-long-chain 3-oxoacyl-CoA reductase	1	LGEWAVVTGGTDGIGK	LGEWAVVTGGTDGIGK	3	LGEWAVVTGGTDGIGK3	8489.14	13542.8	8127.7
Q6PCT3	Q6PCT3	TPD54_RAT	Tpd52l2	Tumor protein D54	1	LGEWNEK	LGEWNEK	2	LGEWNEK2	6645.49		9316.8
P63324	A0A8I6GKR8;A0A8I6AWW2;A0A8I5ZX29;A0A8I6G807;D3ZHB3;P63324;D3ZEB8;D3ZV36;A0A8I6AKK1;D3ZG05	RS12_RAT	Rps12	Small ribosomal subunit protein eS12	0	LGEWVGLCK	LGEWVGLC(UniMod:4)K	2	LGEWVGLC(UniMod:4)K2	79497.4	79167.1	61108.2
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	LGEYDLR	LGEYDLR	1	LGEYDLR1	23054.8	17750.5	26405.1
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	LGEYDLR	LGEYDLR	2	LGEYDLR2	1.04843e+07	6.18891e+06	1.03303e+07
Q1RP74	Q1RP74	Q1RP74_RAT	Tbcb	Tubulin folding cofactor B	1	LGEYEDVSK	LGEYEDVSK	2	LGEYEDVSK2	201114	220844	174054
P02770	P02770	ALBU_RAT	Alb	Albumin	1	LGEYGFQNAVLVR	LGEYGFQNAVLVR	2	LGEYGFQNAVLVR2	1.06027e+06	1.10134e+06	906889
P02770	P02770	ALBU_RAT	Alb	Albumin	1	LGEYGFQNAVLVR	LGEYGFQNAVLVR	3	LGEYGFQNAVLVR3	420345	432484	477551
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	LGFAGDGYECSPIDPCR	LGFAGDGYEC(UniMod:4)SPIDPC(UniMod:4)R	2	LGFAGDGYEC(UniMod:4)SPIDPC(UniMod:4)R2	4687.42	4362.83	4330.84
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	LGFAGVVR	LGFAGVVR	2	LGFAGVVR2	664373	624489	591636
D4A254	D4A254	D4A254_RAT	Phlpp2	PH domain and leucine rich repeat protein phosphatase 2	1	LGFEDPVR	LGFEDPVR	2	LGFEDPVR2	3331.62	5323.05	5195.47
Q64537	Q64537	CPNS1_RAT	Capns1	Calpain small subunit 1	1	LGFEEFK	LGFEEFK	1	LGFEEFK1	18408.1	25448.7	25917.4
Q64537	Q64537	CPNS1_RAT	Capns1	Calpain small subunit 1	1	LGFEEFK	LGFEEFK	2	LGFEEFK2	3.54474e+06	3.50373e+06	3.60243e+06
Q63707	Q63707	PYRD_RAT	Dhodh	Dihydroorotate dehydrogenase (quinone), mitochondrial	1	LGFGFVEVGSVTPQPQEGNPRPR	LGFGFVEVGSVTPQPQEGNPRPR	3	LGFGFVEVGSVTPQPQEGNPRPR3	5972.06	8174.69	4685.77
B5DEH2	B5DEH2	ERLN2_RAT	Erlin2	Erlin-2	1	LGFGLEDEPLETATK	LGFGLEDEPLETATK	2	LGFGLEDEPLETATK2	22556.7	22875.1	29500.6
A0A8I6AQL1	A0A8I6AQL1	A0A8I6AQL1_RAT	Itgb5	Integrin beta	1	LGFGSFVDK	LGFGSFVDK	2	LGFGSFVDK2	349824	327261	317410
Q6AYF4	Q6AYF4	ITB6_RAT	Itgb6	Integrin beta-6	1	LGFGSFVEK	LGFGSFVEK	2	LGFGSFVEK2			375588
Q66H59	Q66H59	NPL_RAT	Npl	N-acetylneuraminate lyase	1	LGFGVSQTK	LGFGVSQTK	2	LGFGVSQTK2	48678.3	48413.9	31032.3
P30427	P30427	PLEC_RAT	Plec	Plectin	1	LGFHLPLEVAYQR	LGFHLPLEVAYQR	3	LGFHLPLEVAYQR3	12644.9	9376.23	3902.95
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	LGFLGNQSQGCTPAR	LGFLGNQSQGC(UniMod:4)TPAR	2	LGFLGNQSQGC(UniMod:4)TPAR2	10593.2	7474.76	10108.3
Q01205	Q01205	ODO2_RAT	Dlst	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial	1	LGFMSAFVK	LGFMSAFVK	2	LGFMSAFVK2	111918	102390	122680
D3ZN06	D3ZN06	D3ZN06_RAT	Cd248	CD248 molecule	1	LGFRPAEDEPHR	LGFRPAEDEPHR	2	LGFRPAEDEPHR2	6085.12	10969.5	8474.34
D3ZN06	D3ZN06	D3ZN06_RAT	Cd248	CD248 molecule	1	LGFRPAEDEPHR	LGFRPAEDEPHR	3	LGFRPAEDEPHR3	412383	453000	364449
P07335	P07335	KCRB_RAT	Ckb	Creatine kinase B-type	1	LGFSEVELVQMVVDGVK	LGFSEVELVQMVVDGVK	2	LGFSEVELVQMVVDGVK2	21197.3	16200.5	32921.8
P07335	P07335	KCRB_RAT	Ckb	Creatine kinase B-type	1	LGFSEVELVQMVVDGVK	LGFSEVELVQMVVDGVK	3	LGFSEVELVQMVVDGVK3	15798.2	17421.1	19058.9
A0A8I6B3N0	A0A8I6B3N0;E9PSK7	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	0	LGFSFVR	LGFSFVR	2	LGFSFVR2	20804.9	19194.1	11295.4
A0A8I5ZVX1	A0A8I5ZVX1	A0A8I5ZVX1_RAT	Ppfibp2	PPFIA binding protein 2	1	LGFSHFGNMR	LGFSHFGNMR	3	LGFSHFGNMR3	17492.9	19383.9	19677.2
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	LGFSSPYEGVR	LGFSSPYEGVR	2	LGFSSPYEGVR2	79801.4	95717.9	69430.3
Q4KLL4	Q4KLL4	TM9S4_RAT	Tm9sf4	Transmembrane 9 superfamily member 4	1	LGFTDVNK	LGFTDVNK	2	LGFTDVNK2	78780	63300.9	62762.2
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	LGFTSDTDRVEMK	LGFTSDTDRVEMK	3	LGFTSDTDRVEMK3	14363.5	8009.87	
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	LGFTVTVGNNR	LGFTVTVGNNR	2	LGFTVTVGNNR2	45735.9	49698.7	43774.3
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	LGFTYLR	LGFTYLR	2	LGFTYLR2	105042	109559	101334
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	LGFVAGVINR	LGFVAGVINR	2	LGFVAGVINR2	168720	166698	167242
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	LGFVSCK	LGFVSC(UniMod:4)K	2	LGFVSC(UniMod:4)K2	14935	7716.8	10248.3
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	LGFVSCKSLK	LGFVSC(UniMod:4)KSLK	2	LGFVSC(UniMod:4)KSLK2	13175.9	7381.51	11540.7
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	LGFYFQK	LGFYFQK	2	LGFYFQK2	39055.8	32118.8	36653.7
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	LGFYGLHESDLDK	LGFYGLHESDLDK	2	LGFYGLHESDLDK2	9984.93	7731.77	6023.37
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	LGFYGLHESDLDK	LGFYGLHESDLDK	3	LGFYGLHESDLDK3	115387	105742	129590
A0A096MJF9	A0A096MJF9	A0A096MJF9_RAT	Tmem132e	Transmembrane protein 132E	1	LGGALATCLVR	LGGALATC(UniMod:4)LVR	2	LGGALATC(UniMod:4)LVR2	8476.12	3764.78	4829.5
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	LGGAVLSFSEATSSVQK	LGGAVLSFSEATSSVQK	2	LGGAVLSFSEATSSVQK2	17874.5	10396.4	14669.5
D3ZYW7	D3ZYW7	FRDA_RAT	Fxn	Frataxin, mitochondrial	1	LGGDLGTYVINK	LGGDLGTYVINK	2	LGGDLGTYVINK2	10855.8	9514.02	14265.1
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	LGGDLLQALNEITESGR	LGGDLLQALNEITESGR	2	LGGDLLQALNEITESGR2	27620.6	34896.5	22816.4
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	LGGDLLQALNEITESGR	LGGDLLQALNEITESGR	3	LGGDLLQALNEITESGR3	7125.84		13788.4
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	LGGDREDLWAGSK	LGGDREDLWAGSK	3	LGGDREDLWAGSK3	73910.5	89715.1	71992.6
A0A8I5YCH6	A0A8I5YCH6	A0A8I5YCH6_RAT	Aaas	Aladin WD repeat nucleoporin	1	LGGEAHAMVWDPSGER	LGGEAHAMVWDPSGER	3	LGGEAHAMVWDPSGER3		6844.68	9277.05
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	LGGEEVSVACK	LGGEEVSVAC(UniMod:4)K	2	LGGEEVSVAC(UniMod:4)K2	204274	1.53371e+07	208193
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	LGGEEVSVACK	LGGEEVSVAC(UniMod:4)K	3	LGGEEVSVAC(UniMod:4)K3	36786	24461.1	19700.2
P13803	P13803	ETFA_RAT	Etfa	Electron transfer flavoprotein subunit alpha, mitochondrial	1	LGGEVSCLVAGTK	LGGEVSC(UniMod:4)LVAGTK	2	LGGEVSC(UniMod:4)LVAGTK2	126895	124767	134912
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	LGGGTYGEVFK	LGGGTYGEVFK	2	LGGGTYGEVFK2	25884.9	37160.2	32479.5
Q32KK0	Q32KK0	Q32KK0_RAT	Arsl	Arylsulfatase E	1	LGGGVLPSDREIDGR	LGGGVLPSDREIDGR	3	LGGGVLPSDREIDGR3	15331.9	22504	21886.8
A0A8I6ABZ7	A0A8I6ABZ7	A0A8I6ABZ7_RAT	Dhx9	RNA helicase	1	LGGIGQFLAK	LGGIGQFLAK	2	LGGIGQFLAK2	4134.96	5194.88	3073.65
A0A8I5ZP12	F1LUS2;A0A8I5ZP12	A0A8I5ZP12_RAT	Ago1	Argonaute RISC component 1	0	LGGINNILVPHQR	LGGINNILVPHQR	3	LGGINNILVPHQR3	2753.24		2866.49
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	LGGIPVGVVAVETR	LGGIPVGVVAVETR	2	LGGIPVGVVAVETR2	23178.3	31802.1	17402.4
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	LGGLDTRPHYITR	LGGLDTRPHYITR	3	LGGLDTRPHYITR3	22182.8	16116.7	
A0A8I5ZU99	A0A8I5ZU99	A0A8I5ZU99_RAT	Ppm1l	Protein phosphatase, Mg2+/Mn2+ dependent, 1L	1	LGGLDVLEAEFSK	LGGLDVLEAEFSK	2	LGGLDVLEAEFSK2	51971.4	37429.6	39817.7
D3ZXK7	D3ZXK7	RN123_RAT	Rnf123	E3 ubiquitin-protein ligase RNF123	1	LGGLLSHLR	LGGLLSHLR	2	LGGLLSHLR2	5483.31	16258.1	8631.07
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	LGGLQFDK	LGGLQFDK	2	LGGLQFDK2	28187.4	21717.8	
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	LGGLQVLR	LGGLQVLR	2	LGGLQVLR2	246518	273058	234574
D3ZK09	D3ZK09	D3ZK09_RAT	Scyl3	SCY1 like pseudokinase 3	1	LGGMETVCK	LGGMETVC(UniMod:4)K	2	LGGMETVC(UniMod:4)K2	15553.2	21806.3	3965.17
O70351	O70351	HCD2_RAT	Hsd17b10	3-hydroxyacyl-CoA dehydrogenase type-2	1	LGGNCIFAPANVTSEK	LGGNC(UniMod:4)IFAPANVTSEK	2	LGGNC(UniMod:4)IFAPANVTSEK2	174023	160595	169570
O70351	O70351	HCD2_RAT	Hsd17b10	3-hydroxyacyl-CoA dehydrogenase type-2	1	LGGNCIFAPANVTSEKEVQAALTLAK	LGGNC(UniMod:4)IFAPANVTSEKEVQAALTLAK	3	LGGNC(UniMod:4)IFAPANVTSEKEVQAALTLAK3	10235.7	16701.4	15239.7
M0RAK0	M0RAK0	M0RAK0_RAT	Proser2	Proline and serine rich 2	1	LGGNEALSPTSPSK	LGGNEALSPTSPSK	2	LGGNEALSPTSPSK2	58594.4	61368.6	46715.1
D4A8N1	D4A8N1	D4A8N1_RAT	Dpm1	Dolichol-phosphate mannosyltransferase subunit 1	1	LGGNEIVSFLK	LGGNEIVSFLK	2	LGGNEIVSFLK2	29510.2	41248.9	34937.9
O35854	O35854	BCAT2_RAT	Bcat2	Branched-chain-amino-acid aminotransferase, mitochondrial	1	LGGNYGPTVAVQQEAQK	LGGNYGPTVAVQQEAQK	2	LGGNYGPTVAVQQEAQK2	38290.2	38704.1	25190.2
O35854	O35854	BCAT2_RAT	Bcat2	Branched-chain-amino-acid aminotransferase, mitochondrial	1	LGGNYGPTVAVQQEAQK	LGGNYGPTVAVQQEAQK	3	LGGNYGPTVAVQQEAQK3	38516.4	38063.4	47970.8
O35854	O35854	BCAT2_RAT	Bcat2	Branched-chain-amino-acid aminotransferase, mitochondrial	1	LGGNYGPTVAVQQEAQKK	LGGNYGPTVAVQQEAQKK	3	LGGNYGPTVAVQQEAQKK3	12991.8	10802.8	13075.7
A0A8I5Y8A9	A0A8I5Y8A9	A0A8I5Y8A9_RAT	Gltpd2	Glycolipid transfer protein domain containing 2	1	LGGPEAGAQCR	LGGPEAGAQC(UniMod:4)R	2	LGGPEAGAQC(UniMod:4)R2	32028.1	25359.3	31664.4
Q9EQS0	Q9EQS0	TALDO_RAT	Taldo1	Transaldolase	1	LGGPQEEQIK	LGGPQEEQIK	2	LGGPQEEQIK2	8443.62	6468.9	10043.9
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	LGGPSVSLR	LGGPSVSLR	2	LGGPSVSLR2	105683	102911	93695.3
Q923S8	Q923S8	PANK4_RAT	Pank4	4'-phosphopantetheine phosphatase	1	LGGQLFSVIFK	LGGQLFSVIFK	2	LGGQLFSVIFK2	4457.36	3951.39	2690.65
P24268	P24268	CATD_RAT	Ctsd	Cathepsin D	1	LGGQNYELHPEK	LGGQNYELHPEK	2	LGGQNYELHPEK2	7559.53	4727.36	8161.79
P24268	P24268	CATD_RAT	Ctsd	Cathepsin D	1	LGGQNYELHPEK	LGGQNYELHPEK	3	LGGQNYELHPEK3	61597.1	75915.1	55676.9
A0A0G2JUC9	A0A0G2JUC9	A0A0G2JUC9_RAT	Herc2	HECT-type E3 ubiquitin transferase	1	LGGQVMHDEFGEGTVTR	LGGQVMHDEFGEGTVTR	3	LGGQVMHDEFGEGTVTR3	2968.7		2878.69
A0A096MK89	A0A096MK89	A0A096MK89_RAT	Adgrv1	Adhesion G protein-coupled receptor V1	1	LGGSKGDLK	LGGSKGDLK	2	LGGSKGDLK2		10909.2	
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	LGGSLADSYLDEGFLLDK	LGGSLADSYLDEGFLLDK	2	LGGSLADSYLDEGFLLDK2	14027.9	23113.6	24818.5
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	LGGSLADSYLDEGFLLDK	LGGSLADSYLDEGFLLDK	3	LGGSLADSYLDEGFLLDK3	2476.13	2216.28	
Q7M0E3	Q7M0E3	DEST_RAT	Dstn	Destrin	1	LGGSLIVAFEGSPV	LGGSLIVAFEGSPV	2	LGGSLIVAFEGSPV2	14548.6	16673.7	11304.4
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LGGSPFGPAGTGK	LGGSPFGPAGTGK	2	LGGSPFGPAGTGK2	271447	338147	296178
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	LGGSPVERPLPK	LGGSPVERPLPK	3	LGGSPVERPLPK3	33624.5	32081.4	35982.5
D4AAT1	D4AAT1	D4AAT1_RAT	Adamts8	ADAM metallopeptidase with thrombospondin type 1 motif, 8	1	LGGSSAAAGGEPGLR	LGGSSAAAGGEPGLR	2	LGGSSAAAGGEPGLR2	21777.8	19375.9	15322.4
Q6Q0N1	Q6Q0N1	CNDP2_RAT	Cndp2	Cytosolic non-specific dipeptidase	1	LGGSVELVDIGK	LGGSVELVDIGK	2	LGGSVELVDIGK2	11031.9	9456.02	11484.6
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	LGGTIDDCELVEGLVLTQK	LGGTIDDC(UniMod:4)ELVEGLVLTQK	3	LGGTIDDC(UniMod:4)ELVEGLVLTQK3	30908.4	26862.2	38717.2
Q9WUC4	Q9WUC4	ATOX1_RAT	Atox1	Copper transport protein ATOX1	1	LGGVEFNIDLPNKK	LGGVEFNIDLPNKK	3	LGGVEFNIDLPNKK3	10420.3	12863.9	22306.2
Q6MG51	Q6MG51	CF047_RAT	G4	Uncharacterized protein C6orf47 homolog	1	LGGWLPRPWGR	LGGWLPRPWGR	3	LGGWLPRPWGR3	22708.2	26567.1	48847.4
P05508	P05508	NU4M_RAT	Mtnd4	NADH-ubiquinone oxidoreductase chain 4	1	LGGYGMMR	LGGYGMMR	2	LGGYGMMR2	10322.9	12574.6	14916.7
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	LGGYLPEDQATPENPTVR	LGGYLPEDQATPENPTVR	2	LGGYLPEDQATPENPTVR2	13986.5	18946	12619
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	LGGYLPEDQATPENPTVR	LGGYLPEDQATPENPTVR	3	LGGYLPEDQATPENPTVR3	13688.3	17101.6	12806.1
D4AC65	D4AC65	D4AC65_RAT	Coa7	Cytochrome c oxidase assembly factor 7	1	LGGYYVTGK	LGGYYVTGK	2	LGGYYVTGK2	6266.32	4451.08	
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	LGHAETDEQLQNIISK	LGHAETDEQLQNIISK	3	LGHAETDEQLQNIISK3	5771.01	8236.41	5464.96
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	LGHDLMLCAPDDQDLLMGR	LGHDLMLC(UniMod:4)APDDQDLLMGR	3	LGHDLMLC(UniMod:4)APDDQDLLMGR3	62147.1	51823.9	55942.9
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	LGHEATVGK	LGHEATVGK	2	LGHEATVGK2			58774.6
G3V619	G3V619	G3V619_RAT	Ascc1	Activating signal cointegrator 1 complex subunit 1	1	LGHEGEIVITGHHR	LGHEGEIVITGHHR	3	LGHEGEIVITGHHR3	7571.48	3882.29	3095.65
G3V619	G3V619	G3V619_RAT	Ascc1	Activating signal cointegrator 1 complex subunit 1	1	LGHEGEIVITGHHR	LGHEGEIVITGHHR	4	LGHEGEIVITGHHR4	22825.5	14841.7	16189.9
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	LGHGLLAFFK	LGHGLLAFFK	2	LGHGLLAFFK2	46963.3	47897.9	55887.9
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	LGHGLLSGEYSK	LGHGLLSGEYSK	2	LGHGLLSGEYSK2	32310.3	27707.1	28465.6
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	LGHGLLSGEYSK	LGHGLLSGEYSK	3	LGHGLLSGEYSK3	248514	298442	307653
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	LGHGLLSGEYSKPALESGDGEQVPEQK	LGHGLLSGEYSKPALESGDGEQVPEQK	3	LGHGLLSGEYSKPALESGDGEQVPEQK3	2740.73		
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	LGHGLLSGEYSKPALESGDGEQVPEQK	LGHGLLSGEYSKPALESGDGEQVPEQK	4	LGHGLLSGEYSKPALESGDGEQVPEQK4	81601.3	85713.5	64817.8
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	LGHILEEFATLQDEAEK	LGHILEEFATLQDEAEK	3	LGHILEEFATLQDEAEK3	2962.42	4558.43	7108.97
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	LGHILVVDEADKAPTNVTCILK	LGHILVVDEADKAPTNVTC(UniMod:4)ILK	3	LGHILVVDEADKAPTNVTC(UniMod:4)ILK3	1206	4017.6	3205.44
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	LGHILVVDEADKAPTNVTCILK	LGHILVVDEADKAPTNVTC(UniMod:4)ILK	4	LGHILVVDEADKAPTNVTC(UniMod:4)ILK4	4672.11	8968.95	5133.81
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LGHIQYMSSIIR	LGHIQYMSSIIR	2	LGHIQYMSSIIR2	5987.78	12771	10397.3
D3Z8U5	D3Z8U5	D3Z8U5_RAT	Tll1	Metalloendopeptidase	1	LGHITGGFGDHGMPK	LGHITGGFGDHGMPK	4	LGHITGGFGDHGMPK4	1652.72	3273.57	
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	LGHLPYSLLFR	LGHLPYSLLFR	3	LGHLPYSLLFR3	3010.66	2644.92	
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LGHLQSSWDTLR	LGHLQSSWDTLR	2	LGHLQSSWDTLR2	21419.5	18224.5	9535.15
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LGHLQSSWDTLR	LGHLQSSWDTLR	3	LGHLQSSWDTLR3	98000.2	125354	118933
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	LGHNNWLR	LGHNNWLR	2	LGHNNWLR2	17606.7	12042.7	9807.51
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	LGHSPPHVQFTYQQPQPLSVEPR	LGHSPPHVQFTYQQPQPLSVEPR	3	LGHSPPHVQFTYQQPQPLSVEPR3	25840.7	15712.5	22831.3
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	LGHSPPHVQFTYQQPQPLSVEPR	LGHSPPHVQFTYQQPQPLSVEPR	4	LGHSPPHVQFTYQQPQPLSVEPR4	160969	153474	164777
G3V6K3	G3V6K3	G3V6K3_RAT	Exosc7	Exosome component 7	1	LGHTDILVGVK	LGHTDILVGVK	3	LGHTDILVGVK3	10924.1	11740.1	12393.8
Q641X8	Q641X8;A0A0G2K273	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	0	LGHVVMGNNAVSPYQQVIEK	LGHVVMGNNAVSPYQQVIEK	3	LGHVVMGNNAVSPYQQVIEK3	116228	94726	141754
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	LGHYATQLQNTYDR	LGHYATQLQNTYDR	2	LGHYATQLQNTYDR2	3190.71	1302.99	2431.93
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	LGHYATQLQNTYDR	LGHYATQLQNTYDR	3	LGHYATQLQNTYDR3	70612.5	77692	67302.8
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	LGIANAWMDFR	LGIANAWMDFR	2	LGIANAWMDFR2	304378	286178	282947
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	LGIAPQIQDLLGK	LGIAPQIQDLLGK	2	LGIAPQIQDLLGK2	76223.8	39418.7	66181.1
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	LGIDSILLDSGSSR	LGIDSILLDSGSSR	2	LGIDSILLDSGSSR2	12425.5	12148.7	12578.6
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	LGIEGLSLHNILK	LGIEGLSLHNILK	2	LGIEGLSLHNILK2	23564.8	13195.4	17178.2
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	LGIEGLSLHNILK	LGIEGLSLHNILK	3	LGIEGLSLHNILK3	161263	156492	172552
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	LGIESTLER	LGIESTLER	2	LGIESTLER2	148601	155556	129075
Q561Q9	Q561Q9	Q561Q9_RAT	Ctsw	Cathepsin W	1	LGIFAHNLAQAQR	LGIFAHNLAQAQR	3	LGIFAHNLAQAQR3	127054	117505	113366
A0A8I5Y1D5	A0A8I5Y1D5	A0A8I5Y1D5_RAT	Mtmr1	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	LGIFENLNK	LGIFENLNK	2	LGIFENLNK2	16756.7	23018.3	12279.9
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	LGIFGDTEDVLGK	LGIFGDTEDVLGK	2	LGIFGDTEDVLGK2	799183	778644	765889
A0A8I6GJC3	A0A8I6GJC3;A0A8I6GKS7	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	0	LGIGQSQEMNTLFR	LGIGQSQEMNTLFR	2	LGIGQSQEMNTLFR2	4771.4	9799.74	6883.39
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	LGIHEDSQNR	LGIHEDSQNR	2	LGIHEDSQNR2	63212.4	67833.7	63496.9
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	LGIHEDSQNR	LGIHEDSQNR	3	LGIHEDSQNR3	1.40587e+06	1.97099e+06	2.09734e+06
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	LGIHEDSQNRK	LGIHEDSQNRK	2	LGIHEDSQNRK2	35256.5		31954.8
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	LGIHEDSQNRK	LGIHEDSQNRK	3	LGIHEDSQNRK3	482337		547983
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	LGIHEDSTNR	LGIHEDSTNR	2	LGIHEDSTNR2	443169	404971	347006
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	LGIHEDSTNR	LGIHEDSTNR	3	LGIHEDSTNR3	3.51712e+06	4.56824e+06	4.1434e+06
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	LGIHEDSTNRR	LGIHEDSTNRR	2	LGIHEDSTNRR2	3268.45	1799.26	
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	LGIHEDSTNRR	LGIHEDSTNRR	3	LGIHEDSTNRR3	242702	250993	290265
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	LGIIGVVNR	LGIIGVVNR	2	LGIIGVVNR2	143197	144725	124135
P56522	P56522	ADRO_RAT	Fdxr	NADPH:adrenodoxin oxidoreductase, mitochondrial	1	LGIIPNTEGR	LGIIPNTEGR	2	LGIIPNTEGR2	41031.1	31826.8	41531.7
Q9QYF3	Q9QYF3	MYO5A_RAT	Myo5a	Unconventional myosin-Va	1	LGILDLLDEECKMPK	LGILDLLDEEC(UniMod:4)KMPK	3	LGILDLLDEEC(UniMod:4)KMPK3	2093.22	8097.57	6650.81
P70569	P70569	MYO5B_RAT	Myo5b	Unconventional myosin-Vb	1	LGILDLLDEECKVPK	LGILDLLDEEC(UniMod:4)KVPK	3	LGILDLLDEEC(UniMod:4)KVPK3	10408.9	9627.09	6482.43
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	LGILDMFLGCIAK	LGILDMFLGC(UniMod:4)IAK	2	LGILDMFLGC(UniMod:4)IAK2		13366.1	11286.5
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	LGILFQPDSFVHGNSGAGNNWAK	LGILFQPDSFVHGNSGAGNNWAK	3	LGILFQPDSFVHGNSGAGNNWAK3	1.66807e+07	1.70952e+07	1.89132e+07
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	LGILFQPDSFVHGNSGAGNNWAK	LGILFQPDSFVHGNSGAGNNWAK	4	LGILFQPDSFVHGNSGAGNNWAK4	33184.1	55193.5	46175.1
Q924S1	Q924S1	PLCD_RAT	Agpat4	1-acyl-sn-glycerol-3-phosphate acyltransferase delta	1	LGILGNSK	LGILGNSK	2	LGILGNSK2	22762.5	25403.2	17129.2
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	LGINLLGGPLGGK	LGINLLGGPLGGK	2	LGINLLGGPLGGK2	52922.1	47980	54405.2
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	LGIPDAVNYIK	LGIPDAVNYIK	2	LGIPDAVNYIK2	136957	163215	134885
Q5XIP2	Q5XIP2	Q5XIP2_RAT	Pigk	GPI-anchor transamidase	1	LGIPDSHIVLMLADDMACNAR	LGIPDSHIVLMLADDMAC(UniMod:4)NAR	3	LGIPDSHIVLMLADDMAC(UniMod:4)NAR3		4189.67	3607.24
Q9EP80	Q9EP80	PICK1_RAT	Pick1	PRKCA-binding protein	1	LGIPTVPGK	LGIPTVPGK	2	LGIPTVPGK2	16768.5	12574.2	16404.8
Q63210	Q63210	GNA12_RAT	Gna12	Guanine nucleotide-binding protein subunit alpha-12	1	LGIPWQHSENEK	LGIPWQHSENEK	3	LGIPWQHSENEK3	5436.6	13140.9	
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	LGIQAEPLYR	LGIQAEPLYR	2	LGIQAEPLYR2	6253.45	8376.28	6379.08
B1PLB1	B1PLB1	B1PLB1_RAT	Cd34	CD34 molecule	1	LGIQSFNK	LGIQSFNK	2	LGIQSFNK2	454108	413607	488847
P70619	P70619	GSHR_RAT	Gsr	Glutathione reductase (Fragment)	1	LGIQTDDK	LGIQTDDK	2	LGIQTDDK2	42304.5	41780.9	53394.3
A0A8I6G9X6	A0A8I6G9X6	A0A8I6G9X6_RAT	Kntc1	Kinetochore associated 1	1	LGISFQPAFR	LGISFQPAFR	2	LGISFQPAFR2	5936.36	6121.84	
B5DEL8	B5DEL8	B5DEL8_RAT	Ndufs5	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5	1	LGISLDR	LGISLDR	2	LGISLDR2	47607.1	46241.9	62410.7
A0A8I5ZMC4	A0A8I5ZMC4	A0A8I5ZMC4_RAT	Fgd5	FYVE, RhoGEF and PH domain containing 5	1	LGISLGER	LGISLGER	2	LGISLGER2	36008.5	37925.5	25203.6
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	LGISSLIR	LGISSLIR	2	LGISSLIR2	27429.6	32171.7	28762.6
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	LGISTIK	LGISTIK	1	LGISTIK1	1041.02		
A0A8I6AF61	A0A8I6AF61	A0A8I6AF61_RAT	Dusp3	Dual specificity protein phosphatase	1	LGITHVLNAAEGR	LGITHVLNAAEGR	3	LGITHVLNAAEGR3	10209	8692	3993.88
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	LGITNLCVIGGDGSLTGANLFR	LGITNLC(UniMod:4)VIGGDGSLTGANLFR	3	LGITNLC(UniMod:4)VIGGDGSLTGANLFR3	31032.1	31018.9	37609.8
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	LGITPEGQSYLDQFR	LGITPEGQSYLDQFR	2	LGITPEGQSYLDQFR2	33179.3	24536.4	24676.3
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	LGITPEGQSYLDQFR	LGITPEGQSYLDQFR	3	LGITPEGQSYLDQFR3	5611.63	6036.86	6478.7
Q505J8	Q505J8	SYFA_RAT	Farsa	Phenylalanine--tRNA ligase alpha subunit	1	LGITQLR	LGITQLR	2	LGITQLR2	29361.5	25680.4	27899.3
Q6AYF8	Q6AYF8	Q6AYF8_RAT	Serpinb9	Serpin family B member 9	1	LGIVDVFQEAK	LGIVDVFQEAK	2	LGIVDVFQEAK2	80282.3	77695.1	76739.3
F1M784	F1M784	F1M784_RAT	Pik3ap1	Phosphoinositide-3-kinase adaptor protein 1	1	LGIVNVDEAVLHFK	LGIVNVDEAVLHFK	3	LGIVNVDEAVLHFK3		5407.6	6714.06
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	LGIVWQDVLPVNIYCK	LGIVWQDVLPVNIYC(UniMod:4)K	2	LGIVWQDVLPVNIYC(UniMod:4)K2	11118.1		7598.63
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	LGIWGGNVALDNLQIK	LGIWGGNVALDNLQIK	2	LGIWGGNVALDNLQIK2	124502	128456	138013
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	LGIWGLFSTGDEHSR	LGIWGLFSTGDEHSR	3	LGIWGLFSTGDEHSR3	4692.51	6842.03	8938.59
D3ZJF9	D3ZJF9	D3ZJF9_RAT	Gla	Alpha-galactosidase	1	LGIYADVGK	LGIYADVGK	2	LGIYADVGK2	21291.2	19126.1	20975.7
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	LGIYEAMK	LGIYEAMK	2	LGIYEAMK2	61983.3	48559.4	64965.6
Q66H12	Q66H12	NAGAB_RAT	Naga	Alpha-N-acetylgalactosaminidase	1	LGIYEDMGK	LGIYEDMGK	2	LGIYEDMGK2	36404	35620.8	38899
P97700	P97700	M2OM_RAT	Slc25a11	Mitochondrial 2-oxoglutarate/malate carrier protein	1	LGIYTVLFER	LGIYTVLFER	2	LGIYTVLFER2	81350	70822.2	52064.7
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	LGKDPNTYFIVGTAMVYPEEAEPK	LGKDPNTYFIVGTAMVYPEEAEPK	3	LGKDPNTYFIVGTAMVYPEEAEPK3	26323.2	18788.9	18618.4
G3V9L1	G3V9L1	G3V9L1_RAT	Tex2	Testis expressed 2	1	LGKEPLVEALK	LGKEPLVEALK	3	LGKEPLVEALK3	11218	10967.9	12258.6
Q63042	Q63042	ALR_RAT	Gfer	FAD-linked sulfhydryl oxidase ALR	1	LGKPDFDCSR	LGKPDFDC(UniMod:4)SR	3	LGKPDFDC(UniMod:4)SR3	6257.41	6779.99	7559.59
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	LGLAFQTPEAYCQQR	LGLAFQTPEAYC(UniMod:4)QQR	2	LGLAFQTPEAYC(UniMod:4)QQR2	53690	43427.8	42928.2
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	LGLAFQTPEAYCQQR	LGLAFQTPEAYC(UniMod:4)QQR	3	LGLAFQTPEAYC(UniMod:4)QQR3			6520.52
P81155	P81155	VDAC2_RAT	Vdac2	Voltage-dependent anion-selective channel protein 2	1	LGLALELEA	LGLALELEA	1	LGLALELEA1	18130.6	35548.4	22464.8
P81155	P81155	VDAC2_RAT	Vdac2	Voltage-dependent anion-selective channel protein 2	1	LGLALELEA	LGLALELEA	2	LGLALELEA2		3215.93	3051.69
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	LGLALNFSVFYYEILNSPDR	LGLALNFSVFYYEILNSPDR	3	LGLALNFSVFYYEILNSPDR3	9060.48		
P61983	P61983	1433G_RAT	Ywhag	14-3-3 protein gamma	1	LGLALNYSVFYYEIQNAPEQACHLAK	LGLALNYSVFYYEIQNAPEQAC(UniMod:4)HLAK	4	LGLALNYSVFYYEIQNAPEQAC(UniMod:4)HLAK4	21858.5	25084.6	34373.7
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	LGLAPQIQDLYGK	LGLAPQIQDLYGK	2	LGLAPQIQDLYGK2	80748.6	75616	80523.5
A4GW50	A4GW50	A4GW50_RAT	Stk38l	Serine/threonine kinase 38 like	1	LGLDDFESLK	LGLDDFESLK	2	LGLDDFESLK2	8527.79	9249.57	5737.57
P08010;Q5BK56	P08010;P08009;Q5BK56	GSTM2_RAT;GSTM4_RAT	Gstm2;Gstm4	Glutathione S-transferase Mu 2	0	LGLDFPNLPYLIDGSHK	LGLDFPNLPYLIDGSHK	3	LGLDFPNLPYLIDGSHK3	5286.74	3354.24	
P04905	P04905	GSTM1_RAT	Gstm1	Glutathione S-transferase Mu 1	1	LGLDFPNLPYLIDGSR	LGLDFPNLPYLIDGSR	2	LGLDFPNLPYLIDGSR2	8827.28	12252.4	8180.83
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	LGLDSEEDYYTPQR	LGLDSEEDYYTPQR	2	LGLDSEEDYYTPQR2	16813.1	20033.6	21001.3
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	LGLDSEEDYYTPQRVDVPK	LGLDSEEDYYTPQRVDVPK	3	LGLDSEEDYYTPQRVDVPK3	7065.98	7067.45	8760.57
Q5XIH7	Q5XIH7	PHB2_RAT	Phb2	Prohibitin-2	1	LGLDYEER	LGLDYEER	2	LGLDYEER2	253431	244210	235580
Q6IE70	Q6IE70	PAN2_RAT	Pan2	PAN2-PAN3 deadenylation complex catalytic subunit Pan2	1	LGLEDFDFK	LGLEDFDFK	2	LGLEDFDFK2	4246.2	3761.52	5721.9
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	LGLEEGTNPFIK	LGLEEGTNPFIK	2	LGLEEGTNPFIK2	14613.7	7137.05	6418.34
D3ZW38	D3ZW38	D3ZW38_RAT	Exosc6	Exosome component 6	1	LGLEGCQR	LGLEGC(UniMod:4)QR	2	LGLEGC(UniMod:4)QR2	9163.65	2614.57	5784.46
D3ZRN5	D3ZRN5	D3ZRN5_RAT	Ro60	Ro60, Y RNA binding protein	1	LGLENAEALIR	LGLENAEALIR	2	LGLENAEALIR2	22771	18800.9	16880.2
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	LGLEVGRPEGR	LGLEVGRPEGR	3	LGLEVGRPEGR3	278198	338245	287729
F1LRS8	F1LRS8	CD2AP_RAT	Cd2ap	CD2-associated protein	1	LGLFPSNFVK	LGLFPSNFVK	2	LGLFPSNFVK2	3660.85	9562.44	8631.94
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	LGLFVFSQEMVFFSDMKYECRDS	LGLFVFSQEMVFFSDMKYEC(UniMod:4)RDS	3	LGLFVFSQEMVFFSDMKYEC(UniMod:4)RDS3	10069	11117.1	18355.2
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	LGLFYQLMHK	LGLFYQLMHK	3	LGLFYQLMHK3	2822.41		0
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	LGLGDSNNQSTLK	LGLGDSNNQSTLK	2	LGLGDSNNQSTLK2	967.679	1875.43	3588.77
P47853	P47853	PGS1_RAT	Bgn	Biglycan	1	LGLGHNQIR	LGLGHNQIR	2	LGLGHNQIR2	15020.6	18131.8	6435.64
Q9Z2L0	A0A8I5ZUF9;Q9Z2L0	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	0	LGLGLEFQA	LGLGLEFQA	1	LGLGLEFQA1	16367.2	31152.6	12520.9
Q9Z2L0	A0A8I5ZUF9;Q9Z2L0	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	0	LGLGLEFQA	LGLGLEFQA	2	LGLGLEFQA2	14481.3	21064.1	20007.8
A0A0G2JUC9	A0A0G2JUC9	A0A0G2JUC9_RAT	Herc2	HECT-type E3 ubiquitin transferase	1	LGLGMSSGTVPIPR	LGLGMSSGTVPIPR	2	LGLGMSSGTVPIPR2	1134.31	1655.17	2797.7
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	LGLGNSTAK	LGLGNSTAK	2	LGLGNSTAK2	5803.09	14072.4	7239.3
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	LGLGNTSNK	LGLGNTSNK	2	LGLGNTSNK2	6269.49	9857.7	6505.58
P50282	P50282	MMP9_RAT	Mmp9	Matrix metalloproteinase-9	1	LGLGSEVTLVTGLLPR	LGLGSEVTLVTGLLPR	2	LGLGSEVTLVTGLLPR2	4787.95	3938	1496.86
D4A8N1	D4A8N1	D4A8N1_RAT	Dpm1	Dolichol-phosphate mannosyltransferase subunit 1	1	LGLGTAYIHGIK	LGLGTAYIHGIK	2	LGLGTAYIHGIK2	7145.72	6694.6	2964.11
D4A8N1	D4A8N1	D4A8N1_RAT	Dpm1	Dolichol-phosphate mannosyltransferase subunit 1	1	LGLGTAYIHGIK	LGLGTAYIHGIK	3	LGLGTAYIHGIK3	32683.1	33737	25236.8
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	LGLGTLSSSLSR	LGLGTLSSSLSR	2	LGLGTLSSSLSR2	16459.2	12343.3	14852.5
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	LGLHQVLQELR	LGLHQVLQELR	2	LGLHQVLQELR2	16535.7	14120.1	16078.3
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	LGLHQVLQELR	LGLHQVLQELR	3	LGLHQVLQELR3	71907.6	57546.7	66201.7
P84079	P61206;P84082;A0A8I5ZU96;P84079	ARF1_RAT	Arf1	ADP-ribosylation factor 1	0	LGLHSLR	LGLHSLR	2	LGLHSLR2	93297.3	75324.8	92048.4
P86172	P86172	NMRL1_RAT	Nmral1	NmrA-like family domain-containing protein 1	1	LGLHYVVYSGLENIK	LGLHYVVYSGLENIK	3	LGLHYVVYSGLENIK3	2112.92	1462.14	
A0A8I6A2Y2	A0A8I6A2Y2	A0A8I6A2Y2_RAT	Srrm2	Serine/arginine repetitive matrix 2	1	LGLIEEDVASSCVLR	LGLIEEDVASSC(UniMod:4)VLR	2	LGLIEEDVASSC(UniMod:4)VLR2	3573.61	2481.63	
P19511	P19511	AT5F1_RAT	Atp5pb	ATP synthase F(0) complex subunit B1, mitochondrial	1	LGLIPEEFFQFLYPK	LGLIPEEFFQFLYPK	2	LGLIPEEFFQFLYPK2	70137.5	314189	269930
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	LGLKEFYILWTK	LGLKEFYILWTK	2	LGLKEFYILWTK2		5944.25	2691.62
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	LGLKEFYILWTK	LGLKEFYILWTK	3	LGLKEFYILWTK3	7588.17	13559	11808
D3ZQ65	D3ZQ65	D3ZQ65_RAT	Emilin3	Elastin microfibril interfacer 3	1	LGLLAAHLNSLPTEQLR	LGLLAAHLNSLPTEQLR	3	LGLLAAHLNSLPTEQLR3	9078.13	2917.86	
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	LGLLGLANTLVIEGR	LGLLGLANTLVIEGR	2	LGLLGLANTLVIEGR2	44679	36849	40255.7
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	LGLLGLANTLVIEGR	LGLLGLANTLVIEGR	3	LGLLGLANTLVIEGR3	11857.4	14751.6	11266.9
Q6UK00	Q6UK00	LDAF1_RAT	Ldaf1	Lipid droplet assembly factor 1	1	LGLLLESFQNNSK	LGLLLESFQNNSK	2	LGLLLESFQNNSK2	13632.9	8510.07	9886.7
Q9EPI1	Q9EPI1	XYLT1_RAT	Xylt1	Xylosyltransferase 1 (Fragment)	1	LGLLMPEK	LGLLMPEK	2	LGLLMPEK2	2477.46	3711.51	1999.18
Q6IRK9	Q6IRK9	CBPQ_RAT	Cpq	Carboxypeptidase Q	1	LGLLVDTVGPR	LGLLVDTVGPR	2	LGLLVDTVGPR2	90780.2	82405.5	68581.9
B0BMV4	B0BMV4	B0BMV4_RAT	Yif1a	Protein YIF1	1	LGLLVFPYTHQNWK	LGLLVFPYTHQNWK	3	LGLLVFPYTHQNWK3	31482.5	22284.4	31059.9
B2RYS2	F7FFF0;B2RYS2	B2RYS2_RAT	Uqcrb	Cytochrome b-c1 complex subunit 7	0	LGLMRDDTMHETEDVK	LGLMRDDTMHETEDVK	3	LGLMRDDTMHETEDVK3	9471.24	11015.8	9575.49
B2RYS2	F7FFF0;B2RYS2	B2RYS2_RAT	Uqcrb	Cytochrome b-c1 complex subunit 7	0	LGLMRDDTMHETEDVK	LGLMRDDTMHETEDVK	4	LGLMRDDTMHETEDVK4	3922.03		8261.87
B2RYS2	F7FFF0;B2RYS2	B2RYS2_RAT	Uqcrb	Cytochrome b-c1 complex subunit 7	0	LGLMRDDTMHETEDVKEAIR	LGLMRDDTMHETEDVKEAIR	4	LGLMRDDTMHETEDVKEAIR4	12055.2	11468	17334.1
A0A0G2JTX7	A0A0G2JTX7	A0A0G2JTX7_RAT	Col6a5	Collagen type VI alpha 5 chain	1	LGLMSFSDK	LGLMSFSDK	2	LGLMSFSDK2	17007.6	7493.15	12202
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	LGLNDILIK	LGLNDILIK	2	LGLNDILIK2	55611.1	49384	49772.3
Q68FT7	Q68FT7	Q68FT7_RAT	Farsb	Phenylalanine--tRNA ligase beta subunit	1	LGLNISATK	LGLNISATK	2	LGLNISATK2	19693.8	10184.3	8386.79
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	LGLNQCMSGIINHEAYHEVPYTTSFTLAK	LGLNQC(UniMod:4)MSGIINHEAYHEVPYTTSFTLAK	4	LGLNQC(UniMod:4)MSGIINHEAYHEVPYTTSFTLAK4	16058.3	15074	15012.2
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	LGLNSQLFPPTAPEVELGPSR	LGLNSQLFPPTAPEVELGPSR	3	LGLNSQLFPPTAPEVELGPSR3	106390	146300	112417
O88994	O88994	MARC2_RAT	Mtarc2	Mitochondrial amidoxime reducing component 2	1	LGLPGQPR	LGLPGQPR	2	LGLPGQPR2	147288	149696	135626
A0A8I5ZSU2	A0A8I5ZSU2	A0A8I5ZSU2_RAT	Ccm2l	CCM2 like scaffold protein	1	LGLPIQDYCAGLQK	LGLPIQDYC(UniMod:4)AGLQK	2	LGLPIQDYC(UniMod:4)AGLQK2	10246.9	8622.92	
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	LGLPSYADRPAGTYSGGNK	LGLPSYADRPAGTYSGGNK	3	LGLPSYADRPAGTYSGGNK3	24212.9	22879	35543.1
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	LGLPTSPLSSTLR	LGLPTSPLSSTLR	2	LGLPTSPLSSTLR2	25450.9	21524.7	31116.5
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	LGLQDLFQSPDLR	LGLQDLFQSPDLR	2	LGLQDLFQSPDLR2	741501	774342	720529
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	LGLQDLFQSPDLR	LGLQDLFQSPDLR	3	LGLQDLFQSPDLR3	50358.1	38345.9	44163.6
P84083	P84083	ARF5_RAT	Arf5	ADP-ribosylation factor 5	1	LGLQHLR	LGLQHLR	2	LGLQHLR2	55612.8	45787.1	52904.5
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	LGLQLNNLGPEACR	LGLQLNNLGPEAC(UniMod:4)R	2	LGLQLNNLGPEAC(UniMod:4)R2	113615	111966	93881.8
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	LGLQLNNLGPEACR	LGLQLNNLGPEAC(UniMod:4)R	3	LGLQLNNLGPEAC(UniMod:4)R3	13538.6	18192.4	29166.6
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	LGLQNDLFSLAR	LGLQNDLFSLAR	2	LGLQNDLFSLAR2	28691	30668.4	22871.3
P61751	P61751	ARF4_RAT	Arf4	ADP-ribosylation factor 4	1	LGLQSLR	LGLQSLR	2	LGLQSLR2	335466	321140	320235
Q63186	Q63186	EI2BD_RAT	Eif2b4	Translation initiation factor eIF-2B subunit delta	1	LGLQYSQGLVSGSNAR	LGLQYSQGLVSGSNAR	2	LGLQYSQGLVSGSNAR2	13189.3	6894.46	12679.8
Q3B7U1	Q3B7U1	Q3B7U1_RAT	Maged2	MAGE family member D2	1	LGLRPGIHHSLFGDVK	LGLRPGIHHSLFGDVK	3	LGLRPGIHHSLFGDVK3	8186.44	5635.22	2180.89
Q3B7U1	Q3B7U1	Q3B7U1_RAT	Maged2	MAGE family member D2	1	LGLRPGIHHSLFGDVK	LGLRPGIHHSLFGDVK	4	LGLRPGIHHSLFGDVK4	11818.5	8484.15	10644.3
P70645	P70645	BLMH_RAT	Blmh	Bleomycin hydrolase	1	LGLSDMNVYDHELVFGVSLK	LGLSDMNVYDHELVFGVSLK	3	LGLSDMNVYDHELVFGVSLK3	6607.64	6989.59	9513.5
G3V6R4	D3ZWS0;G3V6R4	G3V6R4_RAT	Lrrc1	Leucine rich repeat containing 1	0	LGLSDNEIQR	LGLSDNEIQR	2	LGLSDNEIQR2	18763	20490.8	11179.5
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	LGLSESDENCK	LGLSESDENC(UniMod:4)K	2	LGLSESDENC(UniMod:4)K2	13591	16533.2	13955.3
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	LGLSESDENCKR	LGLSESDENC(UniMod:4)KR	3	LGLSESDENC(UniMod:4)KR3	16223.1	11080.8	11992.6
A1L1L9	A1L1L9	A1L1L9_RAT	Tmem65	RGD1563224 protein	1	LGLSIPDLTPK	LGLSIPDLTPK	2	LGLSIPDLTPK2	13211	8184.85	7456.42
F1LUU1	F1LUU1	F1LUU1_RAT	Itga11	Integrin subunit alpha 11	1	LGLSLATNPK	LGLSLATNPK	2	LGLSLATNPK2	16340.3	13614.7	9190.87
A0A0G2K350	A0A0G2K350	A0A0G2K350_RAT	Napg	NSF attachment protein gamma	1	LGLSLVVPGGGIK	LGLSLVVPGGGIK	2	LGLSLVVPGGGIK2	99393.5	98899.6	94475.7
A0A0G2K350	A0A0G2K350	A0A0G2K350_RAT	Napg	NSF attachment protein gamma	1	LGLSLVVPGGGIKK	LGLSLVVPGGGIKK	3	LGLSLVVPGGGIKK3	8669.31	12051.2	12696.6
Q6PCT3	Q6PCT3	TPD54_RAT	Tpd52l2	Tumor protein D54	1	LGLSTLGELK	LGLSTLGELK	2	LGLSTLGELK2	20317.8	13713.7	3562.35
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	LGLTAIQTQNPGFYYQQAAYYAQER	LGLTAIQTQNPGFYYQQAAYYAQER	3	LGLTAIQTQNPGFYYQQAAYYAQER3	10863.1	10093.2	4990.93
A0A0G2QC33	A0A0G2QC33	ATG4B_RAT	Atg4b	Cysteine protease ATG4B	1	LGLTDINEAYVETLK	LGLTDINEAYVETLK	2	LGLTDINEAYVETLK2	26336.8	32192.9	30107.6
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	LGLTFLKPK	LGLTFLKPK	2	LGLTFLKPK2	7878.12	3104.29	6166.21
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	LGLTQGSFAFIHK	LGLTQGSFAFIHK	2	LGLTQGSFAFIHK2	2.40491e+06	2.08626e+06	2.39766e+06
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	LGLTQGSFAFIHK	LGLTQGSFAFIHK	3	LGLTQGSFAFIHK3	1.81585e+07	1.75987e+07	2.05856e+07
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	LGLVEFNILWNR	LGLVEFNILWNR	2	LGLVEFNILWNR2	32509.8	26095.5	23933.6
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	LGLVFDDVVGIVEIINSR	LGLVFDDVVGIVEIINSR	2	LGLVFDDVVGIVEIINSR2	11337.9	5440.33	4157.08
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	LGLVFDDVVGIVEIINSR	LGLVFDDVVGIVEIINSR	3	LGLVFDDVVGIVEIINSR3	152856	4414.68	9783.43
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	LGLVGVNLSLDGVK	LGLVGVNLSLDGVK	2	LGLVGVNLSLDGVK2	14405	24173.9	21863.1
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	LGLVPCGAVGVLLHETQEQK	LGLVPC(UniMod:4)GAVGVLLHETQEQK	3	LGLVPC(UniMod:4)GAVGVLLHETQEQK3	10489.6	16958.9	25631.3
D4A8E7	D4A8E7	D4A8E7_RAT	Commd6	COMM domain containing 6	1	LGMAVSSDSCR	LGMAVSSDSC(UniMod:4)R	2	LGMAVSSDSC(UniMod:4)R2	17765.4	9891.29	14652.3
F1LRE5	F1LRE5;F1LWM8	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	0	LGMDLTK	LGMDLTK	2	LGMDLTK2	72570.6	33169.7	33996.1
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	LGMDLTR	LGMDLTR	2	LGMDLTR2	35412.3	28704.6	35688.4
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	LGMETSAWQEIR	LGMETSAWQEIR	2	LGMETSAWQEIR2	36991.2	31043	48469.1
Q4KLN7	Q4KLN7	ARFG3_RAT	Arfgap3	ADP-ribosylation factor GTPase-activating protein 3	1	LGMGFGSCR	LGMGFGSC(UniMod:4)R	2	LGMGFGSC(UniMod:4)R2	10069.5	8327.76	13194.6
Q3MID3	Q3MID3	ARFG2_RAT	Arfgap2	ADP-ribosylation factor GTPase-activating protein 2	1	LGMGLVSR	LGMGLVSR	2	LGMGLVSR2	18006.6	18772	10759.2
Q5EB81	Q5EB81	NB5R1_RAT	Cyb5r1	NADH-cytochrome b5 reductase 1	1	LGMIAGGTGITPMLQLIR	LGMIAGGTGITPMLQLIR	2	LGMIAGGTGITPMLQLIR2	6474.13	7162.75	
O35783	O35783	CALU_RAT	Calu	Calumenin	1	LGMIVDK	LGMIVDK	1	LGMIVDK1	2661.5		
O35783	O35783	CALU_RAT	Calu	Calumenin	1	LGMIVDK	LGMIVDK	2	LGMIVDK2	723941	718819	590161
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	LGMLKPHCTVSFGLLSR	LGMLKPHC(UniMod:4)TVSFGLLSR	3	LGMLKPHC(UniMod:4)TVSFGLLSR3	1980.77	5179.64	3893.43
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	LGMLKPHCTVSFGLLSR	LGMLKPHC(UniMod:4)TVSFGLLSR	4	LGMLKPHC(UniMod:4)TVSFGLLSR4	12351.3	10981.1	8023.04
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	LGMLSPDGTCR	LGMLSPDGTC(UniMod:4)R	2	LGMLSPDGTC(UniMod:4)R2	75865.4	78925.9	83768.4
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	LGMLSWLLDEEDMK	LGMLSWLLDEEDMK	2	LGMLSWLLDEEDMK2	5689.09	3200.53	1531.08
Q5M872	Q5M872	DPEP2_RAT	Dpep2	Dipeptidase 2	1	LGMMIDLSHVSDATAR	LGMMIDLSHVSDATAR	3	LGMMIDLSHVSDATAR3	24218.9	22636	30284.5
F7FE56	F7FE56	F7FE56_RAT	Tpd52l1	TPD52 like 1	1	LGMNLMNELK	LGMNLMNELK	2	LGMNLMNELK2	68647.3	52544.7	64064.1
D3Z8E0	D3Z8E0	D3Z8E0_RAT	Rps6ka3	Ribosomal protein S6 kinase	1	LGMPQFLSPEAQSLLR	LGMPQFLSPEAQSLLR	2	LGMPQFLSPEAQSLLR2	16984	10980.3	15028.7
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LGMSQIPQK	LGMSQIPQK	2	LGMSQIPQK2	283293	318766	296732
A0A8I6A6H8	A0A8I6A6H8	A0A8I6A6H8_RAT	Serpinb6a	Serpin family B member 6A	1	LGMTDAFMEGR	LGMTDAFMEGR	2	LGMTDAFMEGR2	130882	145444	173192
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	LGMVQAIVAAR	LGMVQAIVAAR	2	LGMVQAIVAAR2	5980.94	9079.91	11215.5
D3ZQ30	D3ZQ30	D3ZQ30_RAT	Telo2	Telomere length regulation protein TEL2 homolog	1	LGMVVAEVISSR	LGMVVAEVISSR	2	LGMVVAEVISSR2	4353.09	9584.83	3511.27
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	LGMYELLLK	LGMYELLLK	2	LGMYELLLK2	975947	878425	785832
Q9QYF3	Q9QYF3	MYO5A_RAT	Myo5a	Unconventional myosin-Va	1	LGNADSFHYTK	LGNADSFHYTK	3	LGNADSFHYTK3	1350.09	3525.37	
P04644	P04644;D3ZKG6;D3ZHU9;D3ZFA8	RS17_RAT	Rps17	Small ribosomal subunit protein eS17	0	LGNDFHTNK	LGNDFHTNK	2	LGNDFHTNK2	5027.74	3634.03	471.767
Q9JHX4	Q9JHX4	CASP8_RAT	Casp8	Caspase-8	1	LGNEELAALK	LGNEELAALK	2	LGNEELAALK2	4245.11	4773.62	3789.7
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	LGNFFSPK	LGNFFSPK	2	LGNFFSPK2	81250.1	94304.4	75766.6
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	LGNFSLK	LGNFSLK	2	LGNFSLK2	30880.8	37433.9	32352
Q05096	Q05096	MYO1B_RAT	Myo1b	Unconventional myosin-Ib	1	LGNIEFKPESR	LGNIEFKPESR	3	LGNIEFKPESR3	12721.2	18058.9	11659.3
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	LGNINTYADDLQNK	LGNINTYADDLQNK	2	LGNINTYADDLQNK2	1.3703e+07	1.41558e+07	1.41975e+07
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	LGNINTYADDLQNK	LGNINTYADDLQNK	3	LGNINTYADDLQNK3	1.3177e+06	1.47629e+06	1.47788e+06
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	LGNINTYADDLQNKLVPFAVQLSGHLTK	LGNINTYADDLQNKLVPFAVQLSGHLTK	4	LGNINTYADDLQNKLVPFAVQLSGHLTK4	22919.1	14970	14089.5
D3ZDE4	D3ZDE4	D3ZDE4_RAT	Dguok	Deoxyguanosine kinase	1	LGNLLDMMYQEPAR	LGNLLDMMYQEPAR	2	LGNLLDMMYQEPAR2	10247	9322.5	12709.8
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	LGNQDLGDHATLK	LGNQDLGDHATLK	2	LGNQDLGDHATLK2	213664	168708	134424
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	LGNQDLGDHATLK	LGNQDLGDHATLK	3	LGNQDLGDHATLK3	880110	871028	782891
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	LGNQDLGDHATLKR	LGNQDLGDHATLKR	2	LGNQDLGDHATLKR2	3400.6		2751.48
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	LGNQDLGDHATLKR	LGNQDLGDHATLKR	3	LGNQDLGDHATLKR3	133058	111521	135268
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	LGNQDLGDHATLKR	LGNQDLGDHATLKR	4	LGNQDLGDHATLKR4	37046.3	50802.5	56613.4
Q6GQP4	Q6GQP4	RAB31_RAT	Rab31	Ras-related protein Rab-31	1	LGNQSLQAGR	LGNQSLQAGR	2	LGNQSLQAGR2	18385.1	14729.2	27977.6
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	LGNREDPLPQDSFEGVDEDEWD	LGNREDPLPQDSFEGVDEDEWD	3	LGNREDPLPQDSFEGVDEDEWD3	5512.38	5083.18	
F7FA09	F7FA09	F7FA09_RAT	Pex11b	Peroxisomal biogenesis factor 11 beta	1	LGNSADALESAK	LGNSADALESAK	2	LGNSADALESAK2	13344.7	6413.58	8599.94
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	LGNTEACSPCHCSPVGSLSTQCDSYGR	LGNTEAC(UniMod:4)SPC(UniMod:4)HC(UniMod:4)SPVGSLSTQC(UniMod:4)DSYGR	4	LGNTEAC(UniMod:4)SPC(UniMod:4)HC(UniMod:4)SPVGSLSTQC(UniMod:4)DSYGR4	12189.6	8536.34	9607.19
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	LGNTISSLFGGGTSSDAK	LGNTISSLFGGGTSSDAK	2	LGNTISSLFGGGTSSDAK2	114209	114362	125316
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	LGNTISSLFGGGTSSDAK	LGNTISSLFGGGTSSDAK	3	LGNTISSLFGGGTSSDAK3	3881.1	7433.65	11351
Q06647	Q06647	ATPO_RAT	Atp5po	ATP synthase subunit O, mitochondrial	1	LGNTQGVISAFSTIMSVHR	LGNTQGVISAFSTIMSVHR	3	LGNTQGVISAFSTIMSVHR3	212747	227823	244312
Q06647	Q06647	ATPO_RAT	Atp5po	ATP synthase subunit O, mitochondrial	1	LGNTQGVISAFSTIMSVHR	LGNTQGVISAFSTIMSVHR	4	LGNTQGVISAFSTIMSVHR4		2305.01	4351.62
D4AE98	D4AE98	D4AE98_RAT	Exosc8	Exosome component 8	1	LGNTTVICGVK	LGNTTVIC(UniMod:4)GVK	2	LGNTTVIC(UniMod:4)GVK2	5003.03	2269.5	5072.76
Q9QYM2	Q9QYM2	PARG_RAT	Parg	Poly(ADP-ribose) glycohydrolase	1	LGNVPQLNLDK	LGNVPQLNLDK	2	LGNVPQLNLDK2	4935.99		5871.95
O70593	O70593	SGTA_RAT	Sgta	Small glutamine-rich tetratricopeptide repeat-containing protein alpha	1	LGNYVGAVQDCER	LGNYVGAVQDC(UniMod:4)ER	2	LGNYVGAVQDC(UniMod:4)ER2	158433	136544	178482
O70593	O70593	SGTA_RAT	Sgta	Small glutamine-rich tetratricopeptide repeat-containing protein alpha	1	LGNYVGAVQDCER	LGNYVGAVQDC(UniMod:4)ER	3	LGNYVGAVQDC(UniMod:4)ER3	5623.25	5004.81	7876.07
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	LGPALATGNVVVMK	LGPALATGNVVVMK	2	LGPALATGNVVVMK2	601133	547108	554616
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	LGPALATGNVVVMK	LGPALATGNVVVMK	3	LGPALATGNVVVMK3	2279.27	3528.49	4567.92
P51607	P51607	RENBP_RAT	Renbp	N-acylglucosamine 2-epimerase	1	LGPAPLGSLPAVPTR	LGPAPLGSLPAVPTR	2	LGPAPLGSLPAVPTR2	12739.4	14479.7	19659.8
G3V784	G3V784	G3V784_RAT	Adpgk	ADP-dependent glucokinase	1	LGPAPVPPGSLSPESR	LGPAPVPPGSLSPESR	2	LGPAPVPPGSLSPESR2	12683.1	15516.2	10002.5
Q499T2	Q499T2	GILT_RAT	Ifi30	Gamma-interferon-inducible lysosomal thiol reductase	1	LGPCLQLYVPEVSPESIMECATGK	LGPC(UniMod:4)LQLYVPEVSPESIMEC(UniMod:4)ATGK	3	LGPC(UniMod:4)LQLYVPEVSPESIMEC(UniMod:4)ATGK3	19576.1	15983.8	12055.8
P37285	A0A8I5Y868;P37285	KLC1_RAT	Klc1	Kinesin light chain 1	0	LGPDDPNVAK	LGPDDPNVAK	2	LGPDDPNVAK2	376284	435757	397445
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	LGPDDVTVDIDAIR	LGPDDVTVDIDAIR	2	LGPDDVTVDIDAIR2	13736.5	11839.9	12592
D4ADT7	D4ADT7	D4ADT7_RAT	Nod1	Nucleotide-binding oligomerization domain containing 1	1	LGPDPFK	LGPDPFK	2	LGPDPFK2	23586.3	18139.9	28479.7
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	LGPDSSVR	LGPDSSVR	2	LGPDSSVR2	53797	72286.1	60728.4
E9PSX8	E9PSX8	E9PSX8_RAT	Sipa1	Signal-induced proliferation-associated 1	1	LGPEAAAQMLR	LGPEAAAQMLR	2	LGPEAAAQMLR2	5696.08	7248.99	
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	LGPEAFR	LGPEAFR	2	LGPEAFR2	205170	213075	213272
Q66H43	Q66H43	BORC6_RAT	Borcs6	BLOC-1-related complex subunit 6	1	LGPEQDLSTGADHQAVTFSGR	LGPEQDLSTGADHQAVTFSGR	3	LGPEQDLSTGADHQAVTFSGR3	4560.07	2571.63	5898.81
D3ZVN7	D3ZVN7	D3ZVN7_RAT	Ppox	Amine oxidase	1	LGPEVASLAMDSLCR	LGPEVASLAMDSLC(UniMod:4)R	2	LGPEVASLAMDSLC(UniMod:4)R2	3142.41	2993.05	4062.65
Q63692	Q63692	CDC37_RAT	Cdc37	Hsp90 co-chaperone Cdc37	1	LGPGGLDPVEVYESLPEELQK	LGPGGLDPVEVYESLPEELQK	3	LGPGGLDPVEVYESLPEELQK3	160121	163959	162346
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	LGPGVSDICK	LGPGVSDIC(UniMod:4)K	2	LGPGVSDIC(UniMod:4)K2	218304	174611	112918
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	LGPHDLITVVDAITFSPK	LGPHDLITVVDAITFSPK	3	LGPHDLITVVDAITFSPK3	6016.44	7607.1	6225.62
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	LGPHIDHPCLPLAEAVR	LGPHIDHPC(UniMod:4)LPLAEAVR	3	LGPHIDHPC(UniMod:4)LPLAEAVR3	3629.14	5302.98	
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	LGPHIDHPCLPLAEAVR	LGPHIDHPC(UniMod:4)LPLAEAVR	4	LGPHIDHPC(UniMod:4)LPLAEAVR4	34548.1	31566.3	24482.3
P97700	P97700	M2OM_RAT	Slc25a11	Mitochondrial 2-oxoglutarate/malate carrier protein	1	LGPHTVLTFIFLEQMNK	LGPHTVLTFIFLEQMNK	3	LGPHTVLTFIFLEQMNK3	27310.9	44055.9	30963.1
F1M3J7	F1M3J7	F1M3J7_RAT	Cntnap4	Contactin associated protein family member 4	1	LGPLLCR	LGPLLC(UniMod:4)R	2	LGPLLC(UniMod:4)R2		6249.76	
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	LGPLLDVLADSR	LGPLLDVLADSR	2	LGPLLDVLADSR2	60174.2	65547.5	51775.9
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	LGPLREPGKEPPR	LGPLREPGKEPPR	3	LGPLREPGKEPPR3	84291.4	106570	81349
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	LGPLVEQGR	LGPLVEQGR	1	LGPLVEQGR1	91530.4	115687	105206
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	LGPLVEQGR	LGPLVEQGR	2	LGPLVEQGR2	1.49824e+06	1.69059e+06	1.41219e+06
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	LGPLVEQGRQR	LGPLVEQGRQR	2	LGPLVEQGRQR2	878.822	1570.89	1966.07
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	LGPLVEQGRQR	LGPLVEQGRQR	3	LGPLVEQGRQR3	1.29804e+06	1.71071e+06	2.14746e+06
B2RZD6	B2RZD6	B2RZD6_RAT	Ndufa4	NDUFA4, mitochondrial complex associated	1	LGPNEQYK	LGPNEQYK	1	LGPNEQYK1	2940.28	1981.93	5800.93
B2RZD6	B2RZD6	B2RZD6_RAT	Ndufa4	NDUFA4, mitochondrial complex associated	1	LGPNEQYK	LGPNEQYK	2	LGPNEQYK2	1.21906e+06	1.13642e+06	1.1089e+06
P04762	P04762	CATA_RAT	Cat	Catalase	1	LGPNYLQIPVNCPYR	LGPNYLQIPVNC(UniMod:4)PYR	2	LGPNYLQIPVNC(UniMod:4)PYR2	16313.7	11974.7	16467
P04762	P04762	CATA_RAT	Cat	Catalase	1	LGPNYLQIPVNCPYR	LGPNYLQIPVNC(UniMod:4)PYR	3	LGPNYLQIPVNC(UniMod:4)PYR3	8657.47	9851.55	5845.35
A0A8I5ZSU2	A0A8I5ZSU2	A0A8I5ZSU2_RAT	Ccm2l	CCM2 like scaffold protein	1	LGPPEIQQFAMLLR	LGPPEIQQFAMLLR	2	LGPPEIQQFAMLLR2		7442.54	15902.2
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	LGPPSSPSAADKEENPAVLAESCFR	LGPPSSPSAADKEENPAVLAESC(UniMod:4)FR	3	LGPPSSPSAADKEENPAVLAESC(UniMod:4)FR3	32134	44937.6	42086
O89035	O89035	DIC_RAT	Slc25a10	Mitochondrial dicarboxylate carrier	1	LGPQAFFK	LGPQAFFK	2	LGPQAFFK2	19801.1	26183.5	28876.2
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	LGPQDSDPTEANLESAEPELCIR	LGPQDSDPTEANLESAEPELC(UniMod:4)IR	3	LGPQDSDPTEANLESAEPELC(UniMod:4)IR3	230656	273730	227034
P09456	P09456	KAP0_RAT	Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit	1	LGPSDYFGEIALLMNRPR	LGPSDYFGEIALLMNRPR	3	LGPSDYFGEIALLMNRPR3	143558	126255	158831
M0RCP2	M0RCP2	M0RCP2_RAT	Sh3pxd2b	SH3 and PX domains 2B	1	LGPSSSAHSGALDLDGVSR	LGPSSSAHSGALDLDGVSR	3	LGPSSSAHSGALDLDGVSR3	8856.8	8591.24	15579.9
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	LGPTLMCLLSTQFR	LGPTLMC(UniMod:4)LLSTQFR	2	LGPTLMC(UniMod:4)LLSTQFR2	27216.5	34896.8	21370.7
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	LGPTLMCLLSTQFR	LGPTLMC(UniMod:4)LLSTQFR	3	LGPTLMC(UniMod:4)LLSTQFR3	9550.15	5290.57	2614.01
A0A8I6AMK1	A0A8I6AMK1	A0A8I6AMK1_RAT	Kdsr	3-dehydrosphinganine reductase	1	LGPVDMLVNCAGTSK	LGPVDMLVNC(UniMod:4)AGTSK	2	LGPVDMLVNC(UniMod:4)AGTSK2	7441.73	7704.56	7489.52
P36972	P36972	APT_RAT	Aprt	Adenine phosphoribosyltransferase	1	LGPVPFFSLLQYE	LGPVPFFSLLQYE	2	LGPVPFFSLLQYE2		5426.59	10385.7
G3V985	G3V985	G3V985_RAT	Sco1	Synthesis of cytochrome C oxidase 1	1	LGPVSWK	LGPVSWK	2	LGPVSWK2	21947.9	16127.4	12808.8
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	LGPVTLTLSGGDPR	LGPVTLTLSGGDPR	2	LGPVTLTLSGGDPR2	14363.6	8392.07	6407
M0R6Q0	M0R6Q0	M0R6Q0_RAT	Casd1	CAS1 domain containing 1	1	LGPVTPEPR	LGPVTPEPR	2	LGPVTPEPR2	2380.81	1366.58	
F7FGS9	F7FGS9	F7FGS9_RAT	Marchf5	Membrane associated ring-CH-type finger 5	1	LGPVVYVLDLADR	LGPVVYVLDLADR	2	LGPVVYVLDLADR2	10652.1	8271.84	19325.6
Q1RP74	Q1RP74	Q1RP74_RAT	Tbcb	Tubulin folding cofactor B	1	LGPYNEELR	LGPYNEELR	2	LGPYNEELR2	109579	89839.1	93305.5
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	LGQALELGYGLQVGTVWINAHGLR	LGQALELGYGLQVGTVWINAHGLR	3	LGQALELGYGLQVGTVWINAHGLR3	6581.84	3369.85	
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	LGQALTEVYAK	LGQALTEVYAK	2	LGQALTEVYAK2	21989.6	11306.4	17690.1
Q4QQT4	Q4QQT4	2AAB_RAT	Ppp2r1b	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	1	LGQDEDMDVK	LGQDEDMDVK	2	LGQDEDMDVK2		4623.96	8357.46
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	LGQEESFSQR	LGQEESFSQR	2	LGQEESFSQR2	11846.2	11388.1	5250.64
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	LGQELCGMLHR	LGQELC(UniMod:4)GMLHR	2	LGQELC(UniMod:4)GMLHR2	4435.81	3663.21	2577.6
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	LGQELCGMLHR	LGQELC(UniMod:4)GMLHR	3	LGQELC(UniMod:4)GMLHR3	11131.7	9214.28	13077
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	LGQELCGMLHRPR	LGQELC(UniMod:4)GMLHRPR	3	LGQELC(UniMod:4)GMLHRPR3	315529	327767	258318
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	LGQELCGMLHRPR	LGQELC(UniMod:4)GMLHRPR	4	LGQELC(UniMod:4)GMLHRPR4	380056	528625	389122
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	LGQGAHHAFGQGGSEAEK	LGQGAHHAFGQGGSEAEK	2	LGQGAHHAFGQGGSEAEK2	854.357		
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	LGQGAHHAFGQGGSEAEK	LGQGAHHAFGQGGSEAEK	3	LGQGAHHAFGQGGSEAEK3	13096.3	20622.1	
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	LGQGAHHAFGQGGSEAEK	LGQGAHHAFGQGGSEAEK	4	LGQGAHHAFGQGGSEAEK4	19258	17441.9	
D3ZBP3	D3ZBP3	D3ZBP3_RAT	Exosc2	Ribosomal RNA-processing protein 4	1	LGQGALVQVSPALVK	LGQGALVQVSPALVK	2	LGQGALVQVSPALVK2	173.024	5037.59	3652.01
Q9WUD9	Q9WUD9	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	1	LGQGCFGEVWMGTWNGTTR	LGQGC(UniMod:4)FGEVWMGTWNGTTR	3	LGQGC(UniMod:4)FGEVWMGTWNGTTR3	42583.1	24557.6	31741.7
D3ZSN4	D3ZSN4	D3ZSN4_RAT	Zfp330	Zinc finger protein 330	1	LGQHSCLR	LGQHSC(UniMod:4)LR	2	LGQHSC(UniMod:4)LR2	4594.38		5889.31
Q9QYU2	Q9QYU2	EFTS_RAT	Tsfm	Elongation factor Ts, mitochondrial	1	LGQHVVGMAPLSVGSLDDEPGGETETR	LGQHVVGMAPLSVGSLDDEPGGETETR	3	LGQHVVGMAPLSVGSLDDEPGGETETR3	26514.3	13244.1	22019
A0A8I6AUQ7	A0A8I6AUQ7	A0A8I6AUQ7_RAT	Zpr1	ZPR1 zinc finger	1	LGQIIEGK	LGQIIEGK	2	LGQIIEGK2	16325.4	18049.7	17650.2
Q498C8	Q498C8	RER1_RAT	Rer1	Protein RER1	1	LGQIYQSWLDK	LGQIYQSWLDK	2	LGQIYQSWLDK2	51985.7	56353.2	55283.7
Q63060	Q63060	GLPK_RAT	Gk	Glycerol kinase	1	LGQLNIDISNIK	LGQLNIDISNIK	2	LGQLNIDISNIK2	31554.2	15977.3	15947.2
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	LGQLWQDVEDQLHAQR	LGQLWQDVEDQLHAQR	3	LGQLWQDVEDQLHAQR3	40055	52930.5	37130.2
D4A8B0	A0A8I5ZQG0;D4A8B0	D4A8B0_RAT	Sec14l5	SEC14-like lipid binding 5	0	LGQMDTK	LGQMDTK	2	LGQMDTK2	19542.7	17818.2	10450.9
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	LGQMIVDYEHPLK	LGQMIVDYEHPLK	2	LGQMIVDYEHPLK2	10672	5335.39	8092.49
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	LGQMIVDYEHPLK	LGQMIVDYEHPLK	3	LGQMIVDYEHPLK3	42029.1	41237.8	41281.4
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	LGQMIVDYEHPLKK	LGQMIVDYEHPLKK	2	LGQMIVDYEHPLKK2	7463.92	3762.06	3726.63
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	LGQMIVDYEHPLKK	LGQMIVDYEHPLKK	3	LGQMIVDYEHPLKK3	41478	58389	44373.3
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	LGQMIVDYEHPLKK	LGQMIVDYEHPLKK	4	LGQMIVDYEHPLKK4	234760	239062	294317
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	LGQMVLEYDHPLKK	LGQMVLEYDHPLKK	3	LGQMVLEYDHPLKK3	20541.7	24659.5	10645.4
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	LGQMVLEYDHPLKK	LGQMVLEYDHPLKK	4	LGQMVLEYDHPLKK4	22006.6	32787.7	28285.4
Q7TT49	Q7TT49;O54874	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	0	LGQNGIEDFK	LGQNGIEDFK	2	LGQNGIEDFK2	28039.6	27058.2	19079.2
Q7TT49	Q7TT49;O54874	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	0	LGQNGIEDFKK	LGQNGIEDFKK	3	LGQNGIEDFKK3	58975.4	62843.4	53227.4
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	LGQPEPNHVK	LGQPEPNHVK	2	LGQPEPNHVK2	111930	130318	106406
D4AEL8	D4AEL8	D4AEL8_RAT	Cep131	Centrosomal protein 131	1	LGQQAAR	LGQQAAR	1	LGQQAAR1			4998.4
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	LGQSDPAPLQHQVDVYQK	LGQSDPAPLQHQVDVYQK	3	LGQSDPAPLQHQVDVYQK3	113375	110251	121368
D3ZUB7	D3ZUB7	D3ZUB7_RAT	Anapc4	Anaphase-promoting complex subunit 4	1	LGQSIESSYSSIQK	LGQSIESSYSSIQK	2	LGQSIESSYSSIQK2	6755.57	8598.01	7591.82
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	LGQSLNCNANVYMR	LGQSLNC(UniMod:4)NANVYMR	2	LGQSLNC(UniMod:4)NANVYMR2	494655	353510	354163
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	LGQSLNCNANVYMR	LGQSLNC(UniMod:4)NANVYMR	3	LGQSLNC(UniMod:4)NANVYMR3	90755	94648	83295.2
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	LGQSLNCNANVYMRPWENK	LGQSLNC(UniMod:4)NANVYMRPWENK	3	LGQSLNC(UniMod:4)NANVYMRPWENK3	3.02697e+06	2.25244e+06	2.84239e+06
P62332	P62332	ARF6_RAT	Arf6	ADP-ribosylation factor 6	1	LGQSVTTIPTVGFNVETVTYK	LGQSVTTIPTVGFNVETVTYK	3	LGQSVTTIPTVGFNVETVTYK3	16064.7	16371.5	22665.6
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	LGQSVVADQLK	LGQSVVADQLK	2	LGQSVVADQLK2	24403.4	31452.7	26098.6
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	LGQTISR	LGQTISR	2	LGQTISR2	14814.1	11095.8	8371.29
D3ZX06	D3ZX06	D3ZX06_RAT	Ghdc	GH3 domain containing	1	LGQTLSVR	LGQTLSVR	2	LGQTLSVR2	9252.46	8819.07	2071.19
Q9QWE9	Q9QWE9	GGT5_RAT	Ggt5	Glutathione hydrolase 5 proenzyme	1	LGQTLVEDIAWQGSQLTVQDLAAFRPK	LGQTLVEDIAWQGSQLTVQDLAAFRPK	4	LGQTLVEDIAWQGSQLTVQDLAAFRPK4	21363.8	17614.6	18662.7
Q2KJ09	Q2KJ09	UBP16_RAT	Usp16	Ubiquitin carboxyl-terminal hydrolase 16	1	LGQVVDYVR	LGQVVDYVR	2	LGQVVDYVR2	19135.6	21691.9	7434.29
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	LGQWLPAAPGQLEK	LGQWLPAAPGQLEK	2	LGQWLPAAPGQLEK2	402917	444317	441076
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	LGQWLPAAPGQLEK	LGQWLPAAPGQLEK	3	LGQWLPAAPGQLEK3	34038.2	32663.8	25325.4
Q66H84	Q66H84	MAPK3_RAT	Mapkapk3	MAP kinase-activated protein kinase 3	1	LGQYGFPKPEWADVSEDAK	LGQYGFPKPEWADVSEDAK	3	LGQYGFPKPEWADVSEDAK3	28317.1	32467.4	24882.4
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	LGQYRNEVNTMLGQSTEELR	LGQYRNEVNTMLGQSTEELR	3	LGQYRNEVNTMLGQSTEELR3	586716	27750.2	12028.6
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	LGQYRNEVNTMLGQSTEELRSR	LGQYRNEVNTMLGQSTEELRSR	4	LGQYRNEVNTMLGQSTEELRSR4	67212.1	51608.5	96442.1
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LGQYSSPDTK	LGQYSSPDTK	2	LGQYSSPDTK2	92112.5	91062.8	92119.2
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LGQYSSPDTKR	LGQYSSPDTKR	2	LGQYSSPDTKR2	722690	669452	745971
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LGQYSSPDTKR	LGQYSSPDTKR	3	LGQYSSPDTKR3	4.75981e+06	6.58803e+06	6.91471e+06
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	LGREEPAMSMDANGK	LGREEPAMSMDANGK	3	LGREEPAMSMDANGK3	66420.4	65687.2	59309.8
Q5BK26	Q5BK26	PLPL7_RAT	Pnpla7	Patatin-like phospholipase domain-containing protein 7	1	LGSAALDSIHEYR	LGSAALDSIHEYR	3	LGSAALDSIHEYR3		4779.23	2892.33
D4A3X7	D4A3X7	D4A3X7_RAT	Snx33	Sorting nexin	1	LGSAFQAISHAFQMDPPFR	LGSAFQAISHAFQMDPPFR	3	LGSAFQAISHAFQMDPPFR3	17191.7	14229.5	
B1WC43	B1WC43	B1WC43_RAT	Tmem41a	Transmembrane protein 41a	1	LGSAGEPEGR	LGSAGEPEGR	2	LGSAGEPEGR2	45113.9	30810.6	35427.4
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	LGSAGGTDFSMK	LGSAGGTDFSMK	2	LGSAGGTDFSMK2	16137.4	17069.1	14277.9
D3ZUN5	D3ZUN5	D3ZUN5_RAT	Pofut2	GDP-fucose protein O-fucosyltransferase 2	1	LGSALGGPYLGVHLR	LGSALGGPYLGVHLR	3	LGSALGGPYLGVHLR3	1496.22	2450.4	6289.67
E9PSX8	E9PSX8	E9PSX8_RAT	Sipa1	Signal-induced proliferation-associated 1	1	LGSASPK	LGSASPK	1	LGSASPK1			1310.62
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	LGSAVVTR	LGSAVVTR	2	LGSAVVTR2	44601.6	55745.5	44705
Q3ZAU6	Q3ZAU6	Q3ZAU6_RAT	Rnf14	RBR-type E3 ubiquitin transferase	1	LGSDCMYFLECR	LGSDC(UniMod:4)MYFLEC(UniMod:4)R	2	LGSDC(UniMod:4)MYFLEC(UniMod:4)R2	10440.7	16707.1	15131.3
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	LGSDLTSAQK	LGSDLTSAQK	2	LGSDLTSAQK2	3919.37	10888.2	12047.7
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	LGSDVACSLAYTDYHK	LGSDVAC(UniMod:4)SLAYTDYHK	2	LGSDVAC(UniMod:4)SLAYTDYHK2	3131.17	946.356	1528.81
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	LGSDVACSLAYTDYHK	LGSDVAC(UniMod:4)SLAYTDYHK	3	LGSDVAC(UniMod:4)SLAYTDYHK3	63754.1	70594.4	78287.7
D3ZRC4	D3ZRC4	PLPL8_RAT	Pnpla8	Calcium-independent phospholipase A2-gamma	1	LGSDVFTQNVIVGTVK	LGSDVFTQNVIVGTVK	2	LGSDVFTQNVIVGTVK2	4842.88	4845.19	7125.46
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	LGSEADVESQDPDSTNLLESEAPR	LGSEADVESQDPDSTNLLESEAPR	3	LGSEADVESQDPDSTNLLESEAPR3	7676.78	5039.13	7970.12
A0A8I6ALW9	A0A8I6ALW9	A0A8I6ALW9_RAT	ENSRNOG00000065952	Ig-like domain-containing protein	1	LGSEDTAIYYCAR	LGSEDTAIYYC(UniMod:4)AR	2	LGSEDTAIYYC(UniMod:4)AR2	351906	316000	362808
A0A8I6ALW9	A0A8I6ALW9	A0A8I6ALW9_RAT	ENSRNOG00000065952	Ig-like domain-containing protein	1	LGSEDTAIYYCAR	LGSEDTAIYYC(UniMod:4)AR	3	LGSEDTAIYYC(UniMod:4)AR3	41833.9	33694.3	48486.4
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	LGSFHELLLEPPK	LGSFHELLLEPPK	3	LGSFHELLLEPPK3	69586.8	71596.3	88055.5
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	LGSFHELLLEPPKK	LGSFHELLLEPPKK	3	LGSFHELLLEPPKK3	47256.4	43064.7	41468.1
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	LGSFHELLLEPPKK	LGSFHELLLEPPKK	4	LGSFHELLLEPPKK4	158382	207244	188776
A0A8I5Y5Z6	A0A8I5Y5Z6	A0A8I5Y5Z6_RAT	Xrcc4	X-ray repair cross complementing 4	1	LGSFNLDK	LGSFNLDK	2	LGSFNLDK2	2565.7		4131.15
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	LGSGSADPLSSQPFSFHR	LGSGSADPLSSQPFSFHR	2	LGSGSADPLSSQPFSFHR2	9609.89	5216.88	5636.1
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	LGSGSADPLSSQPFSFHR	LGSGSADPLSSQPFSFHR	3	LGSGSADPLSSQPFSFHR3	175254	160631	161308
A0A8I6AHB9	A0A8I6AHB9	A0A8I6AHB9_RAT	ENSRNOG00000067679	Ig-like domain-containing protein	1	LGSGVPNR	LGSGVPNR	2	LGSGVPNR2	40563.6	27590.8	25478.8
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	LGSIFGLGLAYAGSNR	LGSIFGLGLAYAGSNR	2	LGSIFGLGLAYAGSNR2	10406.5	20656.6	4877.67
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	LGSIFGLGLAYAGSNR	LGSIFGLGLAYAGSNR	3	LGSIFGLGLAYAGSNR3	8439.85	5041.91	3238.69
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	LGSLFKPTDGFLDTK	LGSLFKPTDGFLDTK	2	LGSLFKPTDGFLDTK2	764735	822697	730222
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	LGSLFKPTDGFLDTK	LGSLFKPTDGFLDTK	3	LGSLFKPTDGFLDTK3	175590	8.22369e+06	200717
A0A8I6AAA9	A0A8I6AAA9	A0A8I6AAA9_RAT	Lrch1	Leucine rich repeats and calponin homology domain containing 1	1	LGSLPEEIGQLK	LGSLPEEIGQLK	2	LGSLPEEIGQLK2	46097.2	58172.1	43938.9
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	LGSLSPGALEGLGQLEELYLQNNDLK	LGSLSPGALEGLGQLEELYLQNNDLK	3	LGSLSPGALEGLGQLEELYLQNNDLK3	113536	115112	144597
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	LGSLSPGALEGLGQLEELYLQNNDLK	LGSLSPGALEGLGQLEELYLQNNDLK	4	LGSLSPGALEGLGQLEELYLQNNDLK4	35794	36186	39028.6
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	LGSLVENNER	LGSLVENNER	2	LGSLVENNER2	201230	198989	209433
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	LGSPATSVPGMGLHPPGPPLAR	LGSPATSVPGMGLHPPGPPLAR	3	LGSPATSVPGMGLHPPGPPLAR3	570021	512692	526279
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	LGSPATSVPGMGLHPPGPPLARPVLPR	LGSPATSVPGMGLHPPGPPLARPVLPR	4	LGSPATSVPGMGLHPPGPPLARPVLPR4	23117.4	60898.3	34428.1
D4A748	D4A748	D4A748_RAT	Wdfy4	WDFY family member 4	1	LGSQAIEPDVLR	LGSQAIEPDVLR	2	LGSQAIEPDVLR2	1143.78	5852.88	9573.01
O08775	O08775	VGFR2_RAT	Kdr	Vascular endothelial growth factor receptor 2	1	LGSQATSVHMGESLTPVCK	LGSQATSVHMGESLTPVC(UniMod:4)K	3	LGSQATSVHMGESLTPVC(UniMod:4)K3	41258.1	37303.8	39107.7
Q9QZM5	Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	1	LGSQHSPGR	LGSQHSPGR	2	LGSQHSPGR2			17511.1
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	LGSQPIR	LGSQPIR	2	LGSQPIR2	201382	187618	222867
Q4V8B7	Q4V8B7	HSDL1_RAT	Hsdl1	Inactive hydroxysteroid dehydrogenase-like protein 1	1	LGSRPDLIK	LGSRPDLIK	2	LGSRPDLIK2	14841.1	15822.2	15006.1
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	LGSRPQPAEAYTEAVQR	LGSRPQPAEAYTEAVQR	3	LGSRPQPAEAYTEAVQR3	47501.5	46038.6	49542.3
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	LGSSAMNAQNIQMLLEK	LGSSAMNAQNIQMLLEK	2	LGSSAMNAQNIQMLLEK2	3586.5	9185.12	4496.39
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	LGSSAMNAQNIQMLLEK	LGSSAMNAQNIQMLLEK	3	LGSSAMNAQNIQMLLEK3		4838.64	
P00564	P00564	KCRM_RAT	Ckm	Creatine kinase M-type	1	LGSSEVEQVQLVVDGVK	LGSSEVEQVQLVVDGVK	2	LGSSEVEQVQLVVDGVK2	937.123	3657.01	2031.34
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	LGSSGLGSASSIQAAVR	LGSSGLGSASSIQAAVR	2	LGSSGLGSASSIQAAVR2	29313.3	26573.9	38220.6
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	LGSSLDWDR	LGSSLDWDR	2	LGSSLDWDR2	90114	97450.4	108065
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	LGSSPTSSCNPTPTK	LGSSPTSSC(UniMod:4)NPTPTK	2	LGSSPTSSC(UniMod:4)NPTPTK2	147274	129666	120772
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	LGSSSLTSIPEEVR	LGSSSLTSIPEEVR	2	LGSSSLTSIPEEVR2	47144.4	46188.5	33898
P34064	P34064	PSA5_RAT	Psma5	Proteasome subunit alpha type-5	1	LGSTAIGIQTSEGVCLAVEK	LGSTAIGIQTSEGVC(UniMod:4)LAVEK	3	LGSTAIGIQTSEGVC(UniMod:4)LAVEK3	8949.71	9217.98	
P34064	P34064	PSA5_RAT	Psma5	Proteasome subunit alpha type-5	1	LGSTAIGIQTSEGVCLAVEKR	LGSTAIGIQTSEGVC(UniMod:4)LAVEKR	3	LGSTAIGIQTSEGVC(UniMod:4)LAVEKR3	17095.1	28813.4	11179.5
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	LGSTAPQVLNTSSPAQQAENEAK	LGSTAPQVLNTSSPAQQAENEAK	3	LGSTAPQVLNTSSPAQQAENEAK3	66629.2	51853.9	71331.5
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	LGSTDLCYIAAVK	LGSTDLC(UniMod:4)YIAAVK	2	LGSTDLC(UniMod:4)YIAAVK2	10928.6	5561.5	9625.2
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	LGSTSDIEEK	LGSTSDIEEK	2	LGSTSDIEEK2	35035.8	25575.4	38792.5
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	LGSTSDIEEKENR	LGSTSDIEEKENR	3	LGSTSDIEEKENR3	48282.3	51638.9	58451.3
P10683	P10683	GALA_RAT	Gal	Galanin peptides	1	LGSVAVPLPESNIVR	LGSVAVPLPESNIVR	2	LGSVAVPLPESNIVR2	72333.5	93891	80774.2
P70473	P70473	AMACR_RAT	Amacr	Alpha-methylacyl-CoA racemase	1	LGSVNHPSHLAR	LGSVNHPSHLAR	3	LGSVNHPSHLAR3		6065.99	
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	LGSVTHVTTFSHASPGNR	LGSVTHVTTFSHASPGNR	3	LGSVTHVTTFSHASPGNR3	24258.8	16248.3	12437.8
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	LGSVTHVTTFSHASPGNR	LGSVTHVTTFSHASPGNR	4	LGSVTHVTTFSHASPGNR4	58213.1	64531.6	64488.3
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	LGSYEHK	LGSYEHK	1	LGSYEHK1			646214
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	LGSYEHK	LGSYEHK	2	LGSYEHK2			3.65708e+07
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	LGSYEHKIHLQPGK	LGSYEHKIHLQPGK	4	LGSYEHKIHLQPGK4	6830.47	8219.8	4826.82
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	LGTAISEEIEFIVPGVPK	LGTAISEEIEFIVPGVPK	2	LGTAISEEIEFIVPGVPK2	11523.7	7566	7389.06
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	LGTAISEEIEFIVPGVPK	LGTAISEEIEFIVPGVPK	3	LGTAISEEIEFIVPGVPK3	4334.63	3403.59	
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	LGTAPPPTK	LGTAPPPTK	2	LGTAPPPTK2	17553.5	16954.9	24061.4
Q6IRJ7	Q6IRJ7	Q6IRJ7_RAT	Anxa7	Annexin	1	LGTDESCFNMILATR	LGTDESC(UniMod:4)FNMILATR	2	LGTDESC(UniMod:4)FNMILATR2	16625.9	12108.4	16156.3
Q6IRJ7	Q6IRJ7	Q6IRJ7_RAT	Anxa7	Annexin	1	LGTDESCFNMILATR	LGTDESC(UniMod:4)FNMILATR	3	LGTDESC(UniMod:4)FNMILATR3	10346.1	7196.73	7435.61
Q5XIS7	Q5XIS7	UBAP1_RAT	Ubap1	Ubiquitin-associated protein 1	1	LGTDFHGTFSYLDDVPFK	LGTDFHGTFSYLDDVPFK	3	LGTDFHGTFSYLDDVPFK3			2295.59
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	LGTDLEYLK	LGTDLEYLK	2	LGTDLEYLK2	4615.62	5262.09	5111.3
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	LGTDLEYLKK	LGTDLEYLKK	3	LGTDLEYLKK3	14723.7	9069.07	8922.84
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	LGTDPTHVMGLYPDLLPTDYR	LGTDPTHVMGLYPDLLPTDYR	3	LGTDPTHVMGLYPDLLPTDYR3	7786.51	4367.57	13830.3
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	LGTECFLAQMR	LGTEC(UniMod:4)FLAQMR	2	LGTEC(UniMod:4)FLAQMR2	9236.99	5037.34	9096.44
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	LGTEEISPR	LGTEEISPR	2	LGTEEISPR2	233805	289543	214987
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	LGTGANMEK	LGTGANMEK	2	LGTGANMEK2	7687.05	9349.11	8301.15
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	LGTGFNPNTLDK	LGTGFNPNTLDK	2	LGTGFNPNTLDK2	55186.4	56446.5	66007.3
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	LGTGGFGNVIR	LGTGGFGNVIR	2	LGTGGFGNVIR2	15194.5	16663.7	13847.7
A0A8I6ANR6	A0A8I6ANR6	A0A8I6ANR6_RAT	Chuk	IkappaB kinase	1	LGTGGFGNVSLYQHR	LGTGGFGNVSLYQHR	3	LGTGGFGNVSLYQHR3	7965.54		6670.87
D4A4T0	D4A4T0	D4A4T0_RAT	Stub1	STIP1 homology and U-box containing protein 1	1	LGTGGGGSPDKSPSAQELK	LGTGGGGSPDKSPSAQELK	3	LGTGGGGSPDKSPSAQELK3	22097.8	11533.5	19650.4
G3V996	G3V996	G3V996_RAT	Letmd1	LETM1 domain containing 1	1	LGTGHLTPQEVR	LGTGHLTPQEVR	3	LGTGHLTPQEVR3	30765.5	25656.2	16206.4
F1MAG1	F1MAG1	F1MAG1_RAT	Agrp	Agouti related neuropeptide	1	LGTGTTNLCSRP	LGTGTTNLC(UniMod:4)SRP	2	LGTGTTNLC(UniMod:4)SRP2	6767.38	8045.06	3712.22
D3ZED8	D3ZED8	D3ZED8_RAT	Pmel	Premelanosome protein	1	LGTHTMEVTVYHR	LGTHTMEVTVYHR	2	LGTHTMEVTVYHR2	2740.81	6711.68	3312.81
D3ZED8	D3ZED8	D3ZED8_RAT	Pmel	Premelanosome protein	1	LGTHTMEVTVYHR	LGTHTMEVTVYHR	3	LGTHTMEVTVYHR3	192176	196699	149349
D3ZED8	D3ZED8	D3ZED8_RAT	Pmel	Premelanosome protein	1	LGTHTMEVTVYHR	LGTHTMEVTVYHR	4	LGTHTMEVTVYHR4	557594	581403	612592
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	LGTHVLQALGDGDFIK	LGTHVLQALGDGDFIK	2	LGTHVLQALGDGDFIK2	6773.64	4698.37	7114.63
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	LGTHVLQALGDGDFIK	LGTHVLQALGDGDFIK	3	LGTHVLQALGDGDFIK3	113424	203662	176751
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	LGTIAIQGAIEK	LGTIAIQGAIEK	2	LGTIAIQGAIEK2	520179	443324	456889
D4ADM2	D4ADM2	D4ADM2_RAT	Pan3	PAN2-PAN3 deadenylation complex subunit PAN3	1	LGTINERPEFQK	LGTINERPEFQK	3	LGTINERPEFQK3	8334.77		4240.01
D4ADM2	D4ADM2	D4ADM2_RAT	Pan3	PAN2-PAN3 deadenylation complex subunit PAN3	1	LGTINERPEFQKDPTWSETGDR	LGTINERPEFQKDPTWSETGDR	4	LGTINERPEFQKDPTWSETGDR4	1833.68	5001.48	3417.66
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	LGTLSALDILIK	LGTLSALDILIK	2	LGTLSALDILIK2	122585	150159	110160
F1LXA0	A0A8I6A2J9;F1LXA0	F1LXA0_RAT	Ndufa12	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	0	LGTLVGEDK	LGTLVGEDK	2	LGTLVGEDK2	52371.6	48818.3	51782.7
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	LGTMDMSITR	LGTMDMSITR	2	LGTMDMSITR2	7831.72	7325.81	1880.59
A0A0G2JYA7	A0A0G2JYA7	A0A0G2JYA7_RAT	Tarbp1	TAR (HIV-1) RNA binding protein 1	1	LGTNAYMPLLR	LGTNAYMPLLR	2	LGTNAYMPLLR2	2411.9		5243.91
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	LGTPELSPTER	LGTPELSPTER	2	LGTPELSPTER2	5362.48	17337	6383.13
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	LGTPLLVR	LGTPLLVR	2	LGTPLLVR2	13368.6	10450.5	9696.04
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	LGTPQQIAIAR	LGTPQQIAIAR	2	LGTPQQIAIAR2	200928	254169	197968
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	LGTQEYLQQLDSHMK	LGTQEYLQQLDSHMK	2	LGTQEYLQQLDSHMK2		897.465	3322.16
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	LGTQEYLQQLDSHMK	LGTQEYLQQLDSHMK	3	LGTQEYLQQLDSHMK3	20144.2	10213.7	15645.8
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	LGTQGYALSGDGAGETFR	LGTQGYALSGDGAGETFR	2	LGTQGYALSGDGAGETFR2	5329.74	9721.86	6141.74
Q5XIT9	Q5XIT9	MCCB_RAT	Mccc2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	1	LGTQPDSGSSTYQENYEQMK	LGTQPDSGSSTYQENYEQMK	3	LGTQPDSGSSTYQENYEQMK3	5407.9	6172.08	3675.11
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	LGTQSPSTSVR	LGTQSPSTSVR	2	LGTQSPSTSVR2	88249.6	92854.2	94278.1
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	LGTSAEGAHLR	LGTSAEGAHLR	2	LGTSAEGAHLR2	2291.38	2132.93	5919.82
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	LGTSELLLAK	LGTSELLLAK	2	LGTSELLLAK2	74585.1	69449.4	78263.9
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	LGTSGLNQPTFQQSK	LGTSGLNQPTFQQSK	2	LGTSGLNQPTFQQSK2	9960.71	6766.31	4747.64
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	LGTSLSSGYVR	LGTSLSSGYVR	2	LGTSLSSGYVR2	15966.4	14401.9	1.94358e+06
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	LGTSVSER	LGTSVSER	2	LGTSVSER2	17902.8	22372.7	13479.3
Q6MG51	Q6MG51	CF047_RAT	G4	Uncharacterized protein C6orf47 homolog	1	LGTTGPEALLEKPGR	LGTTGPEALLEKPGR	3	LGTTGPEALLEKPGR3	20282.9	11219.4	20574.9
Q6MG51	Q6MG51	CF047_RAT	G4	Uncharacterized protein C6orf47 homolog	1	LGTTGPEALLEKPGRR	LGTTGPEALLEKPGRR	4	LGTTGPEALLEKPGRR4	3746.02	16156.4	7927.24
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	LGTTNYDDFLSFIHAVQDR	LGTTNYDDFLSFIHAVQDR	3	LGTTNYDDFLSFIHAVQDR3	7976.55	16725.8	7964.56
P51650	P51650	SSDH_RAT	Aldh5a1	Succinate-semialdehyde dehydrogenase, mitochondrial	1	LGTVADCGVPEAR	LGTVADC(UniMod:4)GVPEAR	2	LGTVADC(UniMod:4)GVPEAR2	5340.37	3232.09	5562.46
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	LGTVISFR	LGTVISFR	2	LGTVISFR2	16467.9	21609.4	9688.98
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	LGTVPQFPR	LGTVPQFPR	2	LGTVPQFPR2	621365	600863	624741
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	LGTYESDK	LGTYESDK	2	LGTYESDK2	4913.7	6810.93	5023.42
B0BNI6	B0BNI6	B0BNI6_RAT	Slc25a35	Solute carrier family 25, member 35	1	LGTYGLAESGGYLR	LGTYGLAESGGYLR	2	LGTYGLAESGGYLR2	6854.95	5774.01	6281.36
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	LGTYMGHTGAVWCVDADWDTK	LGTYMGHTGAVWC(UniMod:4)VDADWDTK	3	LGTYMGHTGAVWC(UniMod:4)VDADWDTK3	24049.4	19035.3	22990.8
D3ZYT6	D3ZYT6	D3ZYT6_RAT	Treml1	Triggering receptor expressed on myeloid cells-like 1	1	LGVCGPSQNTGNSGMDPSSAAHHR	LGVC(UniMod:4)GPSQNTGNSGMDPSSAAHHR	3	LGVC(UniMod:4)GPSQNTGNSGMDPSSAAHHR3	648110	509483	472989
D3ZYT6	D3ZYT6	D3ZYT6_RAT	Treml1	Triggering receptor expressed on myeloid cells-like 1	1	LGVCGPSQNTGNSGMDPSSAAHHR	LGVC(UniMod:4)GPSQNTGNSGMDPSSAAHHR	4	LGVC(UniMod:4)GPSQNTGNSGMDPSSAAHHR4	1.5834e+06	1.62472e+06	1.80958e+06
M0RBL7	M0RBL7	M0RBL7_RAT	Tcaf2c	Protein FAM115C-like	1	LGVDGAGFLQIPAK	LGVDGAGFLQIPAK	2	LGVDGAGFLQIPAK2	7039.46	4440.28	4946.96
A0A0G2K012	A0A0G2K012	A0A0G2K012_RAT	Ubxn6	UBX domain protein 6	1	LGVDTIAK	LGVDTIAK	2	LGVDTIAK2	21838.1	12401.1	16506.8
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	LGVEAALINTNLR	LGVEAALINTNLR	2	LGVEAALINTNLR2	11251.4	10816.4	11731.3
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	LGVEAALINTNLRR	LGVEAALINTNLRR	3	LGVEAALINTNLRR3			8153.42
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	LGVENCYFPIFVSQGALEK	LGVENC(UniMod:4)YFPIFVSQGALEK	3	LGVENC(UniMod:4)YFPIFVSQGALEK3	14190.4	11582.9	7576.74
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	LGVEPSDVDCVSVQHICTIVSFR	LGVEPSDVDC(UniMod:4)VSVQHIC(UniMod:4)TIVSFR	3	LGVEPSDVDC(UniMod:4)VSVQHIC(UniMod:4)TIVSFR3	133927	120921	121092
D3ZWG9	D3ZWG9	D3ZWG9_RAT	Ptar1	Protein prenyltransferase alpha subunit repeat containing 1	1	LGVESWCVK	LGVESWC(UniMod:4)VK	2	LGVESWC(UniMod:4)VK2	5090.92	5066.28	
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	LGVFCFSQENIIWANLR	LGVFC(UniMod:4)FSQENIIWANLR	3	LGVFC(UniMod:4)FSQENIIWANLR3	22345.1	15583.1	11547.7
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	LGVFCFSQENIIWSNLK	LGVFC(UniMod:4)FSQENIIWSNLK	3	LGVFC(UniMod:4)FSQENIIWSNLK3	97574.7	94277.8	121002
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	LGVFCFSQENIIWSNLQYR	LGVFC(UniMod:4)FSQENIIWSNLQYR	3	LGVFC(UniMod:4)FSQENIIWSNLQYR3	3389.84	5940.11	2564.09
A0A8J8Y8E0	A0A8J8Y8E0	A0A8J8Y8E0_RAT	Fibp	FGF1 intracellular binding protein	1	LGVFSEMETNFK	LGVFSEMETNFK	2	LGVFSEMETNFK2	10390.2		4304.51
Q64380	Q64380	SARDH_RAT	Sardh	Sarcosine dehydrogenase, mitochondrial	1	LGVGGVVLLER	LGVGGVVLLER	2	LGVGGVVLLER2	3244.79	1780.2	4608.31
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	LGVGVYPIK	LGVGVYPIK	2	LGVGVYPIK2	39918.5	39556.6	33137.9
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	LGVIEDHSNR	LGVIEDHSNR	2	LGVIEDHSNR2	461598	472491	421595
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	LGVIEDHSNR	LGVIEDHSNR	3	LGVIEDHSNR3	5.22405e+06	6.84181e+06	6.65767e+06
Q566Q8	Q566Q8	CK068_RAT	Bles03	UPF0696 protein C11orf68 homolog	1	LGVLEADSAIR	LGVLEADSAIR	2	LGVLEADSAIR2	6226.73	5098.01	5000.72
D3ZTC4	D3ZTC4	D3ZTC4_RAT	Ccdc88b	Coiled-coil domain containing 88B	1	LGVLEEEVR	LGVLEEEVR	2	LGVLEEEVR2	4626.38	3605.63	5739.12
Q8CGU4	Q8CGU4	AGAP2_RAT	Agap2	Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2	1	LGVLGDVR	LGVLGDVR	2	LGVLGDVR2	9484.17	7961.71	8897.04
Q68FT7	Q68FT7	Q68FT7_RAT	Farsb	Phenylalanine--tRNA ligase beta subunit	1	LGVLHPDVITK	LGVLHPDVITK	3	LGVLHPDVITK3	43140.6	49217.9	45797.8
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	LGVLHVGQK	LGVLHVGQK	2	LGVLHVGQK2	65111.2	49700.8	45532.6
P36372	P36372	TAP2_RAT	Tap2	Antigen peptide transporter 2	1	LGVLWGLLK	LGVLWGLLK	2	LGVLWGLLK2	4986.07	6850.71	3192.94
Q7TP54	Q7TP54	RIPR2_RAT	Ripor2	Rho family-interacting cell polarization regulator 2	1	LGVLYDLDK	LGVLYDLDK	2	LGVLYDLDK2	6544.03	9917.5	13038.8
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	LGVMPPEQPLPVK	LGVMPPEQPLPVK	2	LGVMPPEQPLPVK2	208587	284833	225595
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	LGVMTLLPASR	LGVMTLLPASR	2	LGVMTLLPASR2	91027.1	94049.9	91491.7
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	LGVNNNQGVNIFNYQVATK	LGVNNNQGVNIFNYQVATK	3	LGVNNNQGVNIFNYQVATK3	7560.92	8374.16	8273.96
Q68FT3	Q68FT3	PYRD2_RAT	Pyroxd2	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2	1	LGVNTAVFER	LGVNTAVFER	2	LGVNTAVFER2	23405.5	14558.2	29667.1
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	LGVPDYIPSQQDILLAR	LGVPDYIPSQQDILLAR	2	LGVPDYIPSQQDILLAR2	231474	246904	279783
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	LGVPDYIPSQQDILLAR	LGVPDYIPSQQDILLAR	3	LGVPDYIPSQQDILLAR3	41341.1	40968.1	39632.2
A0A8I6AAA9	A0A8I6AAA9	A0A8I6AAA9_RAT	Lrch1	Leucine rich repeats and calponin homology domain containing 1	1	LGVPEEK	LGVPEEK	2	LGVPEEK2	30520.1	39942.1	21047.1
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	LGVPIREELLR	LGVPIREELLR	3	LGVPIREELLR3	683427	698882	641205
D3ZUX7	D3ZUX7	D3ZUX7_RAT	Acsf3	Acyl-CoA synthetase family member 3	1	LGVPLLPLTPAVYHGAAEKPIEQPIQER	LGVPLLPLTPAVYHGAAEKPIEQPIQER	4	LGVPLLPLTPAVYHGAAEKPIEQPIQER4	4813.03	2328.81	11887.3
B2GV22	B2GV22	PTSS2_RAT	Ptdss2	Phosphatidylserine synthase 2	1	LGVPLPER	LGVPLPER	2	LGVPLPER2	13077.3	13743.1	27732.3
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	LGVQGLSISGYLR	LGVQGLSISGYLR	2	LGVQGLSISGYLR2	7610.6	6369.58	4784.16
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	LGVQGLSISGYLRPAR	LGVQGLSISGYLRPAR	3	LGVQGLSISGYLRPAR3	70323.3	56639.7	48693.5
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	LGVQVVITDPEK	LGVQVVITDPEK	2	LGVQVVITDPEK2	134315	114628	96441.3
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	LGVRPSQGGEAPR	LGVRPSQGGEAPR	2	LGVRPSQGGEAPR2	650851	719720	541078
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	LGVRPSQGGEAPR	LGVRPSQGGEAPR	3	LGVRPSQGGEAPR3	28072.4	36329.5	24778.5
P35738	P35738	ODBB_RAT	Bckdhb	2-oxoisovalerate dehydrogenase subunit beta, mitochondrial	1	LGVSCEVIDLR	LGVSC(UniMod:4)EVIDLR	2	LGVSC(UniMod:4)EVIDLR2	10147.6	10452.6	6881.61
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	LGVSEKK	LGVSEKK	2	LGVSEKK2			21001.4
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	LGVSGYLVSR	LGVSGYLVSR	2	LGVSGYLVSR2		8355.51	9897.94
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	LGVSHIIPEPK	LGVSHIIPEPK	3	LGVSHIIPEPK3	11672	6606.85	8937.33
D4A9V7	D4A9V7	D4A9V7_RAT	Mars2	Methionine--tRNA ligase, mitochondrial	1	LGVSTTER	LGVSTTER	2	LGVSTTER2	9562.89		13130.9
O88989	O88989	MDHC_RAT	Mdh1	Malate dehydrogenase, cytoplasmic	1	LGVTADDVK	LGVTADDVK	2	LGVTADDVK2	121307	112212	120845
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	LGVTGAEEQALGSK	LGVTGAEEQALGSK	2	LGVTGAEEQALGSK2	103533	113678	103113
P09215	P09215	KPCD_RAT	Prkcd	Protein kinase C delta type	1	LGVTGNIR	LGVTGNIR	2	LGVTGNIR2	30224	28326.3	36005.8
D4A3L3	D4A3L3	D4A3L3_RAT	Megf9	Multiple EGF-like-domains 9	1	LGVTGSMCDQCQDGHYGFGK	LGVTGSMC(UniMod:4)DQC(UniMod:4)QDGHYGFGK	3	LGVTGSMC(UniMod:4)DQC(UniMod:4)QDGHYGFGK3	60815.8	60060.4	51300.3
B5DEH4	D3ZF39;B5DEH4	B5DEH4_RAT	Uap1l1	UDP-N-acetylglucosamine pyrophosphorylase 1 like 1	0	LGVTYPK	LGVTYPK	1	LGVTYPK1	7266.36	5787.2	
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	LGVVFEK	LGVVFEK	2	LGVVFEK2	17444	19086.5	16941.3
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	LGVVTFQAFIDFMSR	LGVVTFQAFIDFMSR	3	LGVVTFQAFIDFMSR3	15902.3		
Q6AXX6	Q6AXX6	PXL2A_RAT	Prxl2a	Peroxiredoxin-like 2A	1	LGVWYNSFR	LGVWYNSFR	2	LGVWYNSFR2	45232.4	54347.4	61158.5
A0A096MKE0	A0A096MKE0	A0A096MKE0_RAT	Asph	Aspartate-beta-hydroxylase	1	LGVYDADGDGDFDVDDAK	LGVYDADGDGDFDVDDAK	2	LGVYDADGDGDFDVDDAK2	3118.02	1909.5	
Q8R492	Q8R492	Q8R492_RAT	Fap	Fibroblast activation protein, alpha	1	LGVYEVEDQLTAVR	LGVYEVEDQLTAVR	2	LGVYEVEDQLTAVR2	6558.9	4008.45	9270.64
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	LGWDPKPGEGHLDALLR	LGWDPKPGEGHLDALLR	3	LGWDPKPGEGHLDALLR3	7157.87	4633.16	12776.1
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	LGWDPKPGEGHLDALLR	LGWDPKPGEGHLDALLR	4	LGWDPKPGEGHLDALLR4	28292.7	31971.1	25369.3
A0A0G2JWA3	A0A0G2JWA3	A0A0G2JWA3_RAT	Xpo7	Exportin 7	1	LGWFDCQK	LGWFDC(UniMod:4)QK	2	LGWFDC(UniMod:4)QK2	5325.84	7319.48	
P51111	P51111	HD_RAT	Htt	Huntingtin	1	LGWSPKPGGDFGTVFPEIPVEFLQEK	LGWSPKPGGDFGTVFPEIPVEFLQEK	3	LGWSPKPGGDFGTVFPEIPVEFLQEK3	9997.93	10022.4	10952.8
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	LGWTSGR	LGWTSGR	2	LGWTSGR2	34967.5	27330.9	24902.1
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	LGWVMASADLNQDGHGDLVVGAPGYSHPGR	LGWVMASADLNQDGHGDLVVGAPGYSHPGR	4	LGWVMASADLNQDGHGDLVVGAPGYSHPGR4	2.09345e+06	2.37078e+06	1.97018e+06
A0A0G2JVL6	A0A0G2JVL6	A0A0G2JVL6_RAT	Ndufa8	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8	1	LGWVRPDLGELSK	LGWVRPDLGELSK	3	LGWVRPDLGELSK3	197953	188053	234138
Q5FWS5	Q5FWS5	Q5FWS5_RAT	Loxl1	Lysyl oxidase homolog	1	LGWYPPYAANVPPEAYVPPR	LGWYPPYAANVPPEAYVPPR	3	LGWYPPYAANVPPEAYVPPR3	76538.9	54535.6	89203.3
Q4V7C7	Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	1	LGYAGNTEPQFIIPSCIAIK	LGYAGNTEPQFIIPSC(UniMod:4)IAIK	3	LGYAGNTEPQFIIPSC(UniMod:4)IAIK3	368275	310457	424844
P81795	C9WPN6;P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	0	LGYANAK	LGYANAK	1	LGYANAK1	2095.98		2012.42
A2RUW1	A2RUW1	TOLIP_RAT	Tollip	Toll-interacting protein	1	LGYAVYETPTAHNGAK	LGYAVYETPTAHNGAK	2	LGYAVYETPTAHNGAK2	1754.47	3278.59	
A2RUW1	A2RUW1	TOLIP_RAT	Tollip	Toll-interacting protein	1	LGYAVYETPTAHNGAK	LGYAVYETPTAHNGAK	3	LGYAVYETPTAHNGAK3	14109.8	13475.7	14520.1
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	LGYDGSR	LGYDGSR	2	LGYDGSR2	19555.6	29933	24203.1
A0A0U1RRV5	A0A0U1RRV5	A0A0U1RRV5_RAT	Cluh	Clustered mitochondria protein homolog	1	LGYEEHIPGQTR	LGYEEHIPGQTR	3	LGYEEHIPGQTR3	6370.68	7037.61	7937.06
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	LGYFLALTGFR	LGYFLALTGFR	2	LGYFLALTGFR2	37077.5	19615.3	29334.3
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	LGYFSVDPDSHQGQVVFNR	LGYFSVDPDSHQGQVVFNR	3	LGYFSVDPDSHQGQVVFNR3	30521.4	35532.7	41120.7
P25809	P25809;P09605	KCRU_RAT	Ckmt1	Creatine kinase U-type, mitochondrial	0	LGYILTCPSNLGTGLR	LGYILTC(UniMod:4)PSNLGTGLR	2	LGYILTC(UniMod:4)PSNLGTGLR2	12990.2	6338.39	9494.69
A0A0G2K0I6	A0A0G2K0I6	A0A0G2K0I6_RAT	Cdh5	Cadherin 5	1	LGYLSSTAGK	LGYLSSTAGK	2	LGYLSSTAGK2	88984.7	51337.8	78042.7
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	LGYPVLVR	LGYPVLVR	2	LGYPVLVR2	75269.6	84663.5	80400.3
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	LGYQFTQQGPR	LGYQFTQQGPR	2	LGYQFTQQGPR2	357741	366434	383624
A8WCF8	A8WCF8	TPRGL_RAT	Tprg1l	Tumor protein p63-regulated gene 1-like protein	1	LGYSMTR	LGYSMTR	2	LGYSMTR2	89772.1	109935	114678
Q641Y0	Q641Y0	OST48_RAT	Ddost	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit	1	LGYTHLYSSTQVSVRPLQHTQYER	LGYTHLYSSTQVSVRPLQHTQYER	4	LGYTHLYSSTQVSVRPLQHTQYER4	25496.3	17845.7	
F1LQP9	F1LQP9;D3ZER6	F1LQP9_RAT	Tnpo1	Transportin 1	0	LGYVCPQEVAPMLQQFIR	LGYVC(UniMod:4)PQEVAPMLQQFIR	3	LGYVC(UniMod:4)PQEVAPMLQQFIR3	27316.1	31179.2	34429.1
A0A8I5ZQE4	A0A8I5ZQE4	A0A8I5ZQE4_RAT	Supt5h	Transcription elongation factor SPT5	1	LGYWNQQMVPIK	LGYWNQQMVPIK	2	LGYWNQQMVPIK2	9618.46	8493.94	5772.48
B2GV39	B2GV39	B2GV39_RAT	Mgat4b	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B	1	LHAAEQESLKR	LHAAEQESLKR	3	LHAAEQESLKR3	18369.9	10515	20327.3
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	LHADQQYVLQVSLQR	LHADQQYVLQVSLQR	3	LHADQQYVLQVSLQR3	3533.67	4619.04	2203.35
P19999	P19999	MBL1_RAT	Mbl1	Mannose-binding protein A	1	LHAFSMGK	LHAFSMGK	2	LHAFSMGK2	134090	127359	108973
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	LHALSQIETSIGTVQEK	LHALSQIETSIGTVQEK	3	LHALSQIETSIGTVQEK3		3014.81	5138.68
D4AAT7	D4AAT7	NNRD_RAT	Naxd	ATP-dependent (S)-NAD(P)H-hydrate dehydratase	1	LHALVVGPGLGR	LHALVVGPGLGR	3	LHALVVGPGLGR3	7315.52	7393.62	10474.7
D4AAT7	D4AAT7	NNRD_RAT	Naxd	ATP-dependent (S)-NAD(P)H-hydrate dehydratase	1	LHALVVGPGLGRDDLLLNNVR	LHALVVGPGLGRDDLLLNNVR	4	LHALVVGPGLGRDDLLLNNVR4	4913.26	2891.75	762.844
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	LHATTGALSVVRPLDR	LHATTGALSVVRPLDR	4	LHATTGALSVVRPLDR4	10254.1		
G3V619	G3V619	G3V619_RAT	Ascc1	Activating signal cointegrator 1 complex subunit 1	1	LHATVMNTLLR	LHATVMNTLLR	3	LHATVMNTLLR3	7456.25	5348.08	4333.8
Q5XIC0	Q5XIC0	ECI2_RAT	Eci2	Enoyl-CoA delta isomerase 2	1	LHAVNEEECTTLR	LHAVNEEEC(UniMod:4)TTLR	2	LHAVNEEEC(UniMod:4)TTLR2	2815.42	3730.99	1517.99
Q5XIC0	Q5XIC0	ECI2_RAT	Eci2	Enoyl-CoA delta isomerase 2	1	LHAVNEEECTTLR	LHAVNEEEC(UniMod:4)TTLR	3	LHAVNEEEC(UniMod:4)TTLR3	50532.7	42201	38928.7
Q04589	Q04589;A0A8I6A1Z2	FGFR1_RAT	Fgfr1	Fibroblast growth factor receptor 1	0	LHAVPAAK	LHAVPAAK	1	LHAVPAAK1	1760.83	2234.21	
Q04589	Q04589;A0A8I6A1Z2	FGFR1_RAT	Fgfr1	Fibroblast growth factor receptor 1	0	LHAVPAAK	LHAVPAAK	2	LHAVPAAK2	68977	105734	63935.6
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	LHAVVETLVNHR	LHAVVETLVNHR	2	LHAVVETLVNHR2	1562.05	2162.76	2286.87
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	LHAVVETLVNHR	LHAVVETLVNHR	3	LHAVVETLVNHR3	106540	90803.3	74673.9
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	LHAWFSWLHQSQAGPVPLSYR	LHAWFSWLHQSQAGPVPLSYR	4	LHAWFSWLHQSQAGPVPLSYR4	33345.7	18357.2	24707.1
Q5U203	Q5U203	UBE2F_RAT	Ube2f	NEDD8-conjugating enzyme UBE2F	1	LHCFQLTVSPDEGYYQGGK	LHC(UniMod:4)FQLTVSPDEGYYQGGK	3	LHC(UniMod:4)FQLTVSPDEGYYQGGK3	8192.05	9015.58	11151.8
Q69BT7	Q69BT7	TPPC4_RAT	Trappc4	Trafficking protein particle complex subunit 4	1	LHCFQTLTGIK	LHC(UniMod:4)FQTLTGIK	3	LHC(UniMod:4)FQTLTGIK3	9952.74	5048.38	5719.52
A0A8I6B3Q2	A0A8I6B3Q2	A0A8I6B3Q2_RAT	Plpp5	Phospholipid phosphatase 5	1	LHCFTPQGR	LHC(UniMod:4)FTPQGR	2	LHC(UniMod:4)FTPQGR2		2263.16	
E9PU15	E9PU15	E9PU15_RAT	Dicer1	Endoribonuclease Dicer	1	LHCLLTAEELR	LHC(UniMod:4)LLTAEELR	3	LHC(UniMod:4)LLTAEELR3	3348.54		2877.57
B2RZ79	B2RZ79	B2RZ79_RAT	Iscu	Iron-sulfur cluster assembly enzyme	1	LHCSMLAEDAIK	LHC(UniMod:4)SMLAEDAIK	3	LHC(UniMod:4)SMLAEDAIK3	10250.5	9324.02	10141.3
F7FBG3	F7FBG3	F7FBG3_RAT	Commd7	COMM domain containing 7	1	LHCTQDPVPEAVR	LHC(UniMod:4)TQDPVPEAVR	3	LHC(UniMod:4)TQDPVPEAVR3	20014	23730.5	26116.4
O08730	O08730	GLYG_RAT	Gyg1	Glycogenin-1	1	LHCWSLTQYSK	LHC(UniMod:4)WSLTQYSK	2	LHC(UniMod:4)WSLTQYSK2	5487.55	3817.53	9781.67
O08730	O08730	GLYG_RAT	Gyg1	Glycogenin-1	1	LHCWSLTQYSK	LHC(UniMod:4)WSLTQYSK	3	LHC(UniMod:4)WSLTQYSK3	32519.1	26823.9	37136.5
Q9Z2P6	Q9Z2P6	SNP29_RAT	Snap29	Synaptosomal-associated protein 29	1	LHDAELDSVPASTVNTEVYPK	LHDAELDSVPASTVNTEVYPK	3	LHDAELDSVPASTVNTEVYPK3	31283.6	37501.4	34093.4
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	LHDAIVEVVTCLLR	LHDAIVEVVTC(UniMod:4)LLR	2	LHDAIVEVVTC(UniMod:4)LLR2	18339.7	9191.13	9601.1
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	LHDAIVEVVTCLLR	LHDAIVEVVTC(UniMod:4)LLR	3	LHDAIVEVVTC(UniMod:4)LLR3	14068.7	19658.7	12899.7
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LHDALMELQK	LHDALMELQK	2	LHDALMELQK2	70487.7	76813.6	61856
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LHDALMELQK	LHDALMELQK	3	LHDALMELQK3	168238	167134	183822
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LHDALMELQKK	LHDALMELQKK	3	LHDALMELQKK3		8998.27	13504.5
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	LHDALSAK	LHDALSAK	2	LHDALSAK2	87738.9	66961.1	80553.4
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LHDCGLQGLVASLPEGIASPQLCQGLYK	LHDC(UniMod:4)GLQGLVASLPEGIASPQLC(UniMod:4)QGLYK	4	LHDC(UniMod:4)GLQGLVASLPEGIASPQLC(UniMod:4)QGLYK4	16486.2	12082.5	15920
G3V9C4	G3V9C4	G3V9C4_RAT	St6galnac1	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	1	LHDEGIIQLYQR	LHDEGIIQLYQR	3	LHDEGIIQLYQR3	26301.6	20963.9	30258.5
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	LHDEINVK	LHDEINVK	2	LHDEINVK2		11464.2	9153.09
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	LHDEKEETSGNYDSR	LHDEKEETSGNYDSR	2	LHDEKEETSGNYDSR2			2565.42
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	LHDEKEETSGNYDSR	LHDEKEETSGNYDSR	3	LHDEKEETSGNYDSR3			2239.15
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	LHDEKEETSGNYDSR	LHDEKEETSGNYDSR	4	LHDEKEETSGNYDSR4			7230.08
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	LHDELEEAKDK	LHDELEEAKDK	3	LHDELEEAKDK3	2716.72	3750.37	3538.4
A0A8I6GFC7	A0A0G2JTJ9;A0A8I6GFC7	A0A8I6GFC7_RAT	Ubp1	Upstream binding protein 1	0	LHDETLTYLNQGQSYEIR	LHDETLTYLNQGQSYEIR	3	LHDETLTYLNQGQSYEIR3	16754.5	11030.2	15029.4
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	LHDGEPQGELEQEPK	LHDGEPQGELEQEPK	3	LHDGEPQGELEQEPK3	10769.8	12178.7	5415.92
P53565	P53565;A0A8I5ZR58	CUX1_RAT	Cux1	Homeobox protein cut-like 1	0	LHDIETENQK	LHDIETENQK	3	LHDIETENQK3		9308.59	
P52303	P52303	AP1B1_RAT	Ap1b1	AP-1 complex subunit beta-1	1	LHDINAQLVEDQGFLDTLK	LHDINAQLVEDQGFLDTLK	3	LHDINAQLVEDQGFLDTLK3	18571.7	26560.5	20914.5
Q63313	Q63313	LBP_RAT	Lbp	Lipopolysaccharide-binding protein	1	LHDLDFQIHK	LHDLDFQIHK	2	LHDLDFQIHK2	6001.27		
Q63313	Q63313	LBP_RAT	Lbp	Lipopolysaccharide-binding protein	1	LHDLDFQIHK	LHDLDFQIHK	3	LHDLDFQIHK3	27572.3	19571.5	26732.6
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	LHDLMYFNTLNNIDVIK	LHDLMYFNTLNNIDVIK	3	LHDLMYFNTLNNIDVIK3	5023.21	15679.2	13506.6
D3ZE20	D3ZE20	D3ZE20_RAT	Nfatc1	Nuclear factor of activated T-cells 1	1	LHDLSSPAYAK	LHDLSSPAYAK	2	LHDLSSPAYAK2	6759.76		5713.37
D3ZE20	D3ZE20	D3ZE20_RAT	Nfatc1	Nuclear factor of activated T-cells 1	1	LHDLSSPAYAK	LHDLSSPAYAK	3	LHDLSSPAYAK3	11773.3	13291.6	9391.93
Q01129	Q01129	PGS2_RAT	Dcn	Decorin	1	LHDNEITK	LHDNEITK	2	LHDNEITK2	36440.2	39883.4	35479.7
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	LHDNYELMK	LHDNYELMK	3	LHDNYELMK3		5090.86	4039.88
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	LHDPEGMGIIPR	LHDPEGMGIIPR	2	LHDPEGMGIIPR2	36000.9	30637.6	20346.9
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	LHDPEGMGIIPR	LHDPEGMGIIPR	3	LHDPEGMGIIPR3	84262.5	74987.1	95697.5
P31044	P31044	PEBP1_RAT	Pebp1	Phosphatidylethanolamine-binding protein 1	1	LHDQLAGK	LHDQLAGK	2	LHDQLAGK2	15739.8	7855.81	
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	LHDQMVK	LHDQMVK	2	LHDQMVK2	48350.3	46021.4	44094.8
D3ZD11	D3ZD11	D3ZD11_RAT	Spcs2	Signal peptidase complex subunit 2	1	LHDSLATER	LHDSLATER	2	LHDSLATER2	169427	138424	121052
Q4KM45	Q4KM45	ADSSP_RAT	Adissp	Adipose-secreted signaling protein	1	LHDSVVMVTQESDNSFLVK	LHDSVVMVTQESDNSFLVK	3	LHDSVVMVTQESDNSFLVK3	7036.92	5313.02	4414.15
F7FF81	F7FF81	F7FF81_RAT	Pfdn5	Prefoldin subunit 5	1	LHDVEHVLIDVGTGYYVEK	LHDVEHVLIDVGTGYYVEK	3	LHDVEHVLIDVGTGYYVEK3	25872.1	33408.4	25427.1
F7FF81	F7FF81	F7FF81_RAT	Pfdn5	Prefoldin subunit 5	1	LHDVEHVLIDVGTGYYVEK	LHDVEHVLIDVGTGYYVEK	4	LHDVEHVLIDVGTGYYVEK4	12798.2	11921	6516.02
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	LHDVNNDGFLDEQELEALFTK	LHDVNNDGFLDEQELEALFTK	3	LHDVNNDGFLDEQELEALFTK3	42864.8	41694	49512.1
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	LHEANNELQK	LHEANNELQK	2	LHEANNELQK2	29233.7	22489.1	24683
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	LHEANNELQK	LHEANNELQK	3	LHEANNELQK3	24515.1	21671.6	25162.7
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	LHEATDYPWR	LHEATDYPWR	3	LHEATDYPWR3	12114.1	9232.07	8420.61
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	LHEATDYPWRPALSPFEFQK	LHEATDYPWRPALSPFEFQK	3	LHEATDYPWRPALSPFEFQK3	84048	79556.8	59629
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	LHEATDYPWRPALSPFEFQK	LHEATDYPWRPALSPFEFQK	4	LHEATDYPWRPALSPFEFQK4	151604	180605	172448
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	LHEDDKEQDIADK	LHEDDKEQDIADK	3	LHEDDKEQDIADK3	23595.8	14620.4	28505.3
P21807	P21807	PERI_RAT	Prph	Peripherin	1	LHEEELR	LHEEELR	2	LHEEELR2			4983.54
D3ZUV3	D3ZUV3	D3ZUV3_RAT	Eif2a	Eukaryotic translation initiation factor 2A	1	LHEEEPPQNMK	LHEEEPPQNMK	3	LHEEEPPQNMK3	3461.44		3491.06
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	LHEEGVIYR	LHEEGVIYR	2	LHEEGVIYR2	30595.2	29195.3	27389.5
Q9Z158	Q9Z158	STX17_RAT	Stx17	Syntaxin-17	1	LHEEHINAGR	LHEEHINAGR	3	LHEEHINAGR3	7294.62		5423.26
A0A8I5ZQ33;Q4VBH2	A0A8I5ZQ33;Q4VBH2	A0A8I5ZQ33_RAT;Q4VBH2_RAT	LOC100911093;Trnt1	CCA tRNA nucleotidyltransferase 1, mitochondrial-like	0	LHEENFEVTTLR	LHEENFEVTTLR	3	LHEENFEVTTLR3	5156.1		1626.3
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	LHEFTISGTTYTPEGEVR	LHEFTISGTTYTPEGEVR	3	LHEFTISGTTYTPEGEVR3	1.44656e+06	1.47708e+06	1.61321e+06
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	LHEFTISGTTYTPEGEVR	LHEFTISGTTYTPEGEVR	4	LHEFTISGTTYTPEGEVR4	3161.3		
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	LHEGAAVTMTCASEGLPAPEIFWSK	LHEGAAVTMTC(UniMod:4)ASEGLPAPEIFWSK	3	LHEGAAVTMTC(UniMod:4)ASEGLPAPEIFWSK3	150118	158450	166842
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	LHEGFSSK	LHEGFSSK	1	LHEGFSSK1	696.648		1495.48
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	LHEGFSSK	LHEGFSSK	2	LHEGFSSK2	106785	101442	91369.3
Q80Z30	Q80Z30	PPM1E_RAT	Ppm1e	Protein phosphatase 1E	1	LHEICCNWVK	LHEIC(UniMod:4)C(UniMod:4)NWVK	3	LHEIC(UniMod:4)C(UniMod:4)NWVK3	13077	13502.8	6346.86
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	LHELIITR	LHELIITR	2	LHELIITR2	67366.7	32814.9	54723.5
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	LHELTVMQDR	LHELTVMQDR	2	LHELTVMQDR2	37792	59054.3	62359.7
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	LHELTVMQDR	LHELTVMQDR	3	LHELTVMQDR3	137401	75472.5	124959
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	LHEQALDFGLSWK	LHEQALDFGLSWK	3	LHEQALDFGLSWK3	5870.15	4521.44	6019.26
A0A8I6ANL9	A0A8I6ANL9	A0A8I6ANL9_RAT	Cdc23	Cell division cycle 23	1	LHEQLTESEQAAQCYIK	LHEQLTESEQAAQC(UniMod:4)YIK	3	LHEQLTESEQAAQC(UniMod:4)YIK3	10644.6	10298	10313.9
F1MAG1	F1MAG1	F1MAG1_RAT	Agrp	Agouti related neuropeptide	1	LHESCLGQQVPCCDLCATCYCR	LHESC(UniMod:4)LGQQVPC(UniMod:4)C(UniMod:4)DLC(UniMod:4)ATC(UniMod:4)YC(UniMod:4)R	3	LHESC(UniMod:4)LGQQVPC(UniMod:4)C(UniMod:4)DLC(UniMod:4)ATC(UniMod:4)YC(UniMod:4)R3	2175.83	2624.65	
D3ZBW5	D3ZBW5	D3ZBW5_RAT	LOC685203	Small membrane A-kinase anchor protein	1	LHESEEAFMPGDTCQYR	LHESEEAFMPGDTC(UniMod:4)QYR	3	LHESEEAFMPGDTC(UniMod:4)QYR3	54872	47511.6	53952.9
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	LHEWEDALVAYDK	LHEWEDALVAYDK	3	LHEWEDALVAYDK3	5479.79	7064.55	2599.45
Q63787	Q63787	P85A_RAT	Pik3r1	Phosphatidylinositol 3-kinase regulatory subunit alpha	1	LHEYNTQFQEK	LHEYNTQFQEK	3	LHEYNTQFQEK3	10196	7774.8	11884.6
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	LHFFMPGFAPLTAQGSQQYR	LHFFMPGFAPLTAQGSQQYR	3	LHFFMPGFAPLTAQGSQQYR3	632775	717011	580902
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	LHFFMPGFAPLTAQGSQQYR	LHFFMPGFAPLTAQGSQQYR	4	LHFFMPGFAPLTAQGSQQYR4	89047.5	117654	104643
Q4QRB4	Q4QRB4;Q4QQV0	TBB3_RAT	Tubb3	Tubulin beta-3 chain	0	LHFFMPGFAPLTAR	LHFFMPGFAPLTAR	2	LHFFMPGFAPLTAR2	24038.3	51154	41790.2
Q4QRB4	Q4QRB4;Q4QQV0	TBB3_RAT	Tubb3	Tubulin beta-3 chain	0	LHFFMPGFAPLTAR	LHFFMPGFAPLTAR	3	LHFFMPGFAPLTAR3	147968	153545	137913
P85108	P69897;Q6P9T8;B4F7C2;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	LHFFMPGFAPLTSR	LHFFMPGFAPLTSR	2	LHFFMPGFAPLTSR2	3.83428e+06	7.77221e+06	3.761e+06
P85108	P69897;Q6P9T8;B4F7C2;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	LHFFMPGFAPLTSR	LHFFMPGFAPLTSR	3	LHFFMPGFAPLTSR3	5.04187e+06	9.47992e+06	8.37989e+06
P85108	P69897;Q6P9T8;B4F7C2;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	LHFFMPGFAPLTSR	LHFFMPGFAPLTSR	4	LHFFMPGFAPLTSR4	2853.13	5730.2	7878.29
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	LHFGHNR	LHFGHNR	2	LHFGHNR2	40476.8		41877.6
P83888	P83888;A0A8I6A5N2	TBG1_RAT	Tubg1	Tubulin gamma-1 chain	0	LHFLMTGYTPLTTDQSVASVR	LHFLMTGYTPLTTDQSVASVR	3	LHFLMTGYTPLTTDQSVASVR3	9155.82	10047.4	6193
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	LHFSCSSYLITTPCYSDAFAK	LHFSC(UniMod:4)SSYLITTPC(UniMod:4)YSDAFAK	3	LHFSC(UniMod:4)SSYLITTPC(UniMod:4)YSDAFAK3	24118.6	25127	22853.8
A0A8I5ZXJ1	A0A8I5ZXJ1	A0A8I5ZXJ1_RAT	Ermap	Erythroblast membrane associated protein (Scianna blood group)	1	LHFVAVTLDPDTAHPK	LHFVAVTLDPDTAHPK	4	LHFVAVTLDPDTAHPK4	5593.46		2484.46
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	LHGDDNGWTPNVDSNK	LHGDDNGWTPNVDSNK	2	LHGDDNGWTPNVDSNK2	8201.21	3913.26	5720.19
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	LHGDDNGWTPNVDSNK	LHGDDNGWTPNVDSNK	3	LHGDDNGWTPNVDSNK3	37231.5	37976.2	25369.4
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	LHGDGELQDVGPLAQQPAGK	LHGDGELQDVGPLAQQPAGK	3	LHGDGELQDVGPLAQQPAGK3	25373.1	20605	21180.5
Q5XIS9	D4A229;Q5XIS9;Q9WTQ1	KPCD2_RAT	Prkd2	Serine/threonine-protein kinase D2	0	LHGDMLEMILSSEK	LHGDMLEMILSSEK	3	LHGDMLEMILSSEK3	5047.01	2140.32	2236.23
Q62784	Q62784	INP4A_RAT	Inpp4a	Inositol polyphosphate-4-phosphatase type I A	1	LHGEGGEDVFPCSSTCSSK	LHGEGGEDVFPC(UniMod:4)SSTC(UniMod:4)SSK	3	LHGEGGEDVFPC(UniMod:4)SSTC(UniMod:4)SSK3	19220.7	11438.2	15575.8
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	LHGEQMASYFGHSVAVTDVNGDGR	LHGEQMASYFGHSVAVTDVNGDGR	3	LHGEQMASYFGHSVAVTDVNGDGR3	36853.8	26648.1	20785.7
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	LHGEQMASYFGHSVAVTDVNGDGR	LHGEQMASYFGHSVAVTDVNGDGR	4	LHGEQMASYFGHSVAVTDVNGDGR4	875411	847137	864027
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	LHGEVLR	LHGEVLR	2	LHGEVLR2	18288.5	10619	10218.5
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	LHGEVPHIEVTR	LHGEVPHIEVTR	3	LHGEVPHIEVTR3	19701.7	35697	13868.5
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	LHGFAAVLAIGSSR	LHGFAAVLAIGSSR	3	LHGFAAVLAIGSSR3	26612	25225.2	27649.3
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	LHGGFDSDCSEDGEALNGEPELDLTSK	LHGGFDSDC(UniMod:4)SEDGEALNGEPELDLTSK	3	LHGGFDSDC(UniMod:4)SEDGEALNGEPELDLTSK3	5391.77	5655.21	4854.83
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	LHGGTPANFLDVGGGATVHQVTEAFK	LHGGTPANFLDVGGGATVHQVTEAFK	3	LHGGTPANFLDVGGGATVHQVTEAFK3	10377.7	23235	10241.8
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	LHGGTPANFLDVGGGATVHQVTEAFK	LHGGTPANFLDVGGGATVHQVTEAFK	4	LHGGTPANFLDVGGGATVHQVTEAFK4	73048.1	52771.2	55521.9
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	LHGPTTTLQGSGISAPTR	LHGPTTTLQGSGISAPTR	2	LHGPTTTLQGSGISAPTR2	1543.71		
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	LHGPTTTLQGSGISAPTR	LHGPTTTLQGSGISAPTR	3	LHGPTTTLQGSGISAPTR3	30012	36342.9	40889
Q5M936	Q5M936	TOR3A_RAT	Tor3a	Torsin-3A	1	LHGQHLASK	LHGQHLASK	2	LHGQHLASK2			9905.65
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	LHGQLLR	LHGQLLR	2	LHGQLLR2	54234.1	71453.8	63211
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	LHGSGDLEAWEK	LHGSGDLEAWEK	3	LHGSGDLEAWEK3	23628.6	21410.8	25824
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	LHHAADLEK	LHHAADLEK	2	LHHAADLEK2			33828.8
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	LHHGILWLFLDPFQTR	LHHGILWLFLDPFQTR	3	LHHGILWLFLDPFQTR3	19483	13896.4	8345.38
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	LHHGILWLFLDPFQTR	LHHGILWLFLDPFQTR	4	LHHGILWLFLDPFQTR4	5849.23	6419.37	4831.5
D4AD29	D4AD29	D4AD29_RAT	Lamtor4	Ragulator complex protein LAMTOR4	1	LHHGTNIPFK	LHHGTNIPFK	3	LHHGTNIPFK3	12703.1	14773.5	10320.7
G3V6R4	G3V6R4	G3V6R4_RAT	Lrrc1	Leucine rich repeat containing 1	1	LHHLPLSLTTLK	LHHLPLSLTTLK	3	LHHLPLSLTTLK3	18160.5	11975.2	28362.3
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	LHHQGDAEDIFFDSHSVNAHAPQFR	LHHQGDAEDIFFDSHSVNAHAPQFR	4	LHHQGDAEDIFFDSHSVNAHAPQFR4	11536.4	12088.8	16278
P58366	P58366	ANKH_RAT	Ankh	Progressive ankylosis protein homolog	1	LHHVDESVGSK	LHHVDESVGSK	3	LHHVDESVGSK3			3971.46
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	LHHVSSLAWLDEHTLVTTSHDASVK	LHHVSSLAWLDEHTLVTTSHDASVK	3	LHHVSSLAWLDEHTLVTTSHDASVK3	10029.7	1776.81	4197.13
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	LHHVSSLAWLDEHTLVTTSHDASVK	LHHVSSLAWLDEHTLVTTSHDASVK	4	LHHVSSLAWLDEHTLVTTSHDASVK4	13971.9	28258	38716.6
Q5XIR9	Q5XIR9	UBAC1_RAT	Ubac1	Ubiquitin-associated domain-containing protein 1	1	LHICAADGSEWLEEATEDTSVEK	LHIC(UniMod:4)AADGSEWLEEATEDTSVEK	3	LHIC(UniMod:4)AADGSEWLEEATEDTSVEK3		3154.62	1376.12
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	LHICEHFTR	LHIC(UniMod:4)EHFTR	3	LHIC(UniMod:4)EHFTR3	12271.9	14592.6	16735
F1LP44	F1LP44	F1LP44_RAT	Itgal	Integrin subunit alpha L	1	LHIFASKPVEEFVK	LHIFASKPVEEFVK	4	LHIFASKPVEEFVK4	3706.13	2033.98	4547.19
G3V965	G3V965	G3V965_RAT	Agpat5	1-acylglycerol-3-phosphate O-acyltransferase 5	1	LHIHFDR	LHIHFDR	2	LHIHFDR2	20911.5	18859.3	17387.4
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	LHIIEVGTPPTGNQPFPK	LHIIEVGTPPTGNQPFPK	2	LHIIEVGTPPTGNQPFPK2	178749	158366	144465
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	LHIIEVGTPPTGNQPFPK	LHIIEVGTPPTGNQPFPK	3	LHIIEVGTPPTGNQPFPK3	2.69324e+06	2.79569e+06	2.9813e+06
P51886	P51886	LUM_RAT	Lum	Lumican	1	LHINYNNLTESVGPLPK	LHINYNNLTESVGPLPK	2	LHINYNNLTESVGPLPK2	2739.65	4049.12	
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	LHIPGQMFISYNYICFASK	LHIPGQMFISYNYIC(UniMod:4)FASK	3	LHIPGQMFISYNYIC(UniMod:4)FASK3	10567	10768.2	9382.62
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	LHIPWGDNK	LHIPWGDNK	2	LHIPWGDNK2	50269.3	51565.9	41414.6
Q6P7Q1	Q6P7Q1	BABA2_RAT	Babam2	BRISC and BRCA1-A complex member 2	1	LHIPYAGETLK	LHIPYAGETLK	3	LHIPYAGETLK3	37977.1	39211.4	47607.7
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	LHIQFFEADEHHK	LHIQFFEADEHHK	4	LHIQFFEADEHHK4	3659.1	1769.67	2498.5
Q5EB62	Q5EB62	S2546_RAT	Slc25a46	Mitochondrial outer membrane protein SLC25A46	1	LHIQGTR	LHIQGTR	2	LHIQGTR2	8943.64	7174.85	13360.1
P30904	D4A3P7;D3ZE63;P30904	MIF_RAT	Mif	Macrophage migration inhibitory factor	0	LHISPDR	LHISPDR	2	LHISPDR2	49895.7	29185.2	29485.6
Q4QQW4	Q4QQW4;D3ZVU7;A0A8I6A1Y8	HDAC1_RAT	Hdac1	Histone deacetylase 1	0	LHISPSNMTNQNTNEYLEK	LHISPSNMTNQNTNEYLEK	3	LHISPSNMTNQNTNEYLEK3	3699.67	3331.5	3695.31
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	LHISQLQHENSILR	LHISQLQHENSILR	2	LHISQLQHENSILR2	726.909		
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	LHISQLQHENSILR	LHISQLQHENSILR	3	LHISQLQHENSILR3	77354.6	76265.8	80974.5
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	LHISQLQHENSILR	LHISQLQHENSILR	4	LHISQLQHENSILR4	39096.1	40111.6	28315.5
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	LHITPEK	LHITPEK	1	LHITPEK1	1950.17	7162.9	6478.23
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	LHITPEK	LHITPEK	2	LHITPEK2	54784.6	101045	89943.5
Q0D2L6	Q0D2L6	Q0D2L6_RAT	Rragc	Ras-related GTP-binding protein	1	LHITVSK	LHITVSK	2	LHITVSK2	11340.5	15907.2	
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	LHIVALIAQK	LHIVALIAQK	2	LHIVALIAQK2	33209.7	30265	28513.9
Q5XFW6	Q5XFW6	WDR6_RAT	Wdr6	WD repeat-containing protein 6	1	LHIVNCGGGHR	LHIVNC(UniMod:4)GGGHR	2	LHIVNC(UniMod:4)GGGHR2	4788.91		
Q5XFW6	Q5XFW6	WDR6_RAT	Wdr6	WD repeat-containing protein 6	1	LHIVNCGGGHR	LHIVNC(UniMod:4)GGGHR	3	LHIVNC(UniMod:4)GGGHR3	13310.3	23287.3	4127.31
Q6MG61	Q6MG61	CLIC1_RAT	Clic1	Chloride intracellular channel protein 1	1	LHIVQVVCK	LHIVQVVC(UniMod:4)K	2	LHIVQVVC(UniMod:4)K2	22323.9	18369.9	13869.6
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	LHIYVWYCQNKPR	LHIYVWYC(UniMod:4)QNKPR	3	LHIYVWYC(UniMod:4)QNKPR3	17142.2	14469.9	9852.18
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	LHIYVWYCQNKPR	LHIYVWYC(UniMod:4)QNKPR	4	LHIYVWYC(UniMod:4)QNKPR4	50127.6	43249.7	51583.4
P58751	P58751	RELN_RAT	Reln	Reelin	1	LHLCGSVR	LHLC(UniMod:4)GSVR	2	LHLC(UniMod:4)GSVR2	54951.5	43208.9	42189.5
G3V728	G3V728	G3V728_RAT	Nipsnap1	Nipsnap homolog 1	1	LHLDEDYPCSLVGNWNTWYGEQDQAVHLWR	LHLDEDYPC(UniMod:4)SLVGNWNTWYGEQDQAVHLWR	4	LHLDEDYPC(UniMod:4)SLVGNWNTWYGEQDQAVHLWR4	5758.44	2590.18	2690.66
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	LHLDLLQNVLR	LHLDLLQNVLR	2	LHLDLLQNVLR2	2524.89	3074.66	3023.81
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	LHLDLLQNVLR	LHLDLLQNVLR	3	LHLDLLQNVLR3	17474	16077.6	23336.5
P16975	P16975	SPRC_RAT	Sparc	SPARC	1	LHLDYIGPCK	LHLDYIGPC(UniMod:4)K	2	LHLDYIGPC(UniMod:4)K2	135441	147851	126252
P16975	P16975	SPRC_RAT	Sparc	SPARC	1	LHLDYIGPCK	LHLDYIGPC(UniMod:4)K	3	LHLDYIGPC(UniMod:4)K3	729350	789925	769742
M0R8H5	M0R8H5	M0R8H5_RAT	Lrg1	Leucine-rich alpha-2-glycoprotein 1	1	LHLEGNR	LHLEGNR	2	LHLEGNR2	26343.1	12046.5	15830.9
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	LHLEGQQVR	LHLEGQQVR	2	LHLEGQQVR2		3409.73	4198.07
Q6AYB9	Q6AYB9	Q6AYB9_RAT	Prmt2	Protein arginine methyltransferase 2	1	LHLEMLADQPR	LHLEMLADQPR	3	LHLEMLADQPR3	16245.6	11671.4	11813.5
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	LHLEQHLDLVATLSK	LHLEQHLDLVATLSK	2	LHLEQHLDLVATLSK2		3146.2	5141.32
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	LHLEQHLDLVATLSK	LHLEQHLDLVATLSK	3	LHLEQHLDLVATLSK3	75887.5	66774.8	86196.1
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	LHLEQHLDLVATLSK	LHLEQHLDLVATLSK	4	LHLEQHLDLVATLSK4	112828	97462.1	121053
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	LHLGGYHGTAGDSMSYHSGSVFSAR	LHLGGYHGTAGDSMSYHSGSVFSAR	3	LHLGGYHGTAGDSMSYHSGSVFSAR3	5102.89	10836.2	6905.54
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	LHLGGYHGTAGDSMSYHSGSVFSAR	LHLGGYHGTAGDSMSYHSGSVFSAR	4	LHLGGYHGTAGDSMSYHSGSVFSAR4	51329	75504.3	63403
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	LHLGHTFSLSK	LHLGHTFSLSK	3	LHLGHTFSLSK3	15243.8	11099.6	8562.81
Q793F9	Q793F9	VPS4A_RAT	Vps4a	Vacuolar protein sorting-associated protein 4A	1	LHLGSTPHNLTDANIHELAR	LHLGSTPHNLTDANIHELAR	3	LHLGSTPHNLTDANIHELAR3	5111.46	3314.51	
Q793F9	Q793F9	VPS4A_RAT	Vps4a	Vacuolar protein sorting-associated protein 4A	1	LHLGSTPHNLTDANIHELAR	LHLGSTPHNLTDANIHELAR	4	LHLGSTPHNLTDANIHELAR4	50527	93266.5	105786
A0A8I6GH80	A0A8I6GH80	A0A8I6GH80_RAT	Vps4b	vesicle-fusing ATPase	1	LHLGSTQNSLTEADFQELGR	LHLGSTQNSLTEADFQELGR	3	LHLGSTQNSLTEADFQELGR3	9876.03	10112.6	
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	LHLIAQELPFDR	LHLIAQELPFDR	2	LHLIAQELPFDR2		1911.17	3211.48
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	LHLIAQELPFDR	LHLIAQELPFDR	3	LHLIAQELPFDR3	45068.8	41364.7	45000.4
A0A0G2JZA7	A0A0G2JZA7	A0A0G2JZA7_RAT	Cemip2	hyaluronoglucosaminidase	1	LHLLDDVSSWGAGDR	LHLLDDVSSWGAGDR	3	LHLLDDVSSWGAGDR3	2360.68	4094.53	6937.82
A0A8I6AL39	A0A8I6AL39	A0A8I6AL39_RAT	Fgd3	FYVE, RhoGEF and PH domain containing 3	1	LHLLDQVFCAK	LHLLDQVFC(UniMod:4)AK	3	LHLLDQVFC(UniMod:4)AK3	3241.95	1416.85	1202.79
Q3B7D1	Q3B7D1	UBE2Z_RAT	Ube2z	Ubiquitin-conjugating enzyme E2 Z	1	LHLQGQTMQDPFGEK	LHLQGQTMQDPFGEK	2	LHLQGQTMQDPFGEK2	7686.9	11692.6	6545.15
Q3B7D1	Q3B7D1	UBE2Z_RAT	Ube2z	Ubiquitin-conjugating enzyme E2 Z	1	LHLQGQTMQDPFGEK	LHLQGQTMQDPFGEK	3	LHLQGQTMQDPFGEK3	70264.9	66911.1	73050.1
Q3B7D1	Q3B7D1	UBE2Z_RAT	Ube2z	Ubiquitin-conjugating enzyme E2 Z	1	LHLQGQTMQDPFGEKR	LHLQGQTMQDPFGEKR	3	LHLQGQTMQDPFGEKR3	7702.84	5729.31	
Q3B7D1	Q3B7D1	UBE2Z_RAT	Ube2z	Ubiquitin-conjugating enzyme E2 Z	1	LHLQGQTMQDPFGEKR	LHLQGQTMQDPFGEKR	4	LHLQGQTMQDPFGEKR4	15966.4	12432.7	12880.5
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	LHLQHENR	LHLQHENR	2	LHLQHENR2			16780.7
F7FFW7	F7FFW7	F7FFW7_RAT	Atp6v0d1	ATPase H+ transporting V0 subunit D1	1	LHLQSTDYGNFLANEASPLTVSVIDDKLK	LHLQSTDYGNFLANEASPLTVSVIDDKLK	4	LHLQSTDYGNFLANEASPLTVSVIDDKLK4	18919.2	16226.2	10972.7
Q9WUK5	Q9WUK5	INHBC_RAT	Inhbc	Inhibin beta C chain	1	LHLSQRPILSR	LHLSQRPILSR	3	LHLSQRPILSR3		32716.5	30243.9
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	LHLSSPDNFR	LHLSSPDNFR	2	LHLSSPDNFR2	15677.7	9767.56	9534.91
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	LHLSSPDNFR	LHLSSPDNFR	3	LHLSSPDNFR3	47812.7	47591.3	59195
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	LHLSVSLSSGRDEAK	LHLSVSLSSGRDEAK	4	LHLSVSLSSGRDEAK4	4268.54	6877.04	8963.83
F1LQZ3	E9PSJ3;E9PSL8;F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	0	LHLVDLAGSER	LHLVDLAGSER	2	LHLVDLAGSER2	14214.3		14024
F1LQZ3	E9PSJ3;E9PSL8;F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	0	LHLVDLAGSER	LHLVDLAGSER	3	LHLVDLAGSER3	25514.7	25444.1	31044.6
F1M7L9	F1M7L9	PKP2_RAT	Pkp2	Plakophilin-2	1	LHLVENDFVGR	LHLVENDFVGR	3	LHLVENDFVGR3	8493.71	7744.68	4901.01
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	LHLVESLLNR	LHLVESLLNR	2	LHLVESLLNR2	5955.55	9805.08	9238.42
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	LHLVESLLNR	LHLVESLLNR	3	LHLVESLLNR3	2017.28		5541.25
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	LHLVWQQHCIIEEIAR	LHLVWQQHC(UniMod:4)IIEEIAR	4	LHLVWQQHC(UniMod:4)IIEEIAR4	14460.9	18275.3	16950.5
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	LHMATPPTFGVELINELVENFGR	LHMATPPTFGVELINELVENFGR	3	LHMATPPTFGVELINELVENFGR3		6483.65	
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	LHMDMENLQEEK	LHMDMENLQEEK	2	LHMDMENLQEEK2	20127.1	18644.2	26227.2
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	LHMDMENLQEEK	LHMDMENLQEEK	3	LHMDMENLQEEK3	56283	51306.3	59783.2
P09760	P09760	FER_RAT	Fer	Tyrosine-protein kinase Fer	1	LHMLHNQYVLALK	LHMLHNQYVLALK	3	LHMLHNQYVLALK3	2183.06	2411.5	
P09760	P09760	FER_RAT	Fer	Tyrosine-protein kinase Fer	1	LHMLHNQYVLALK	LHMLHNQYVLALK	4	LHMLHNQYVLALK4	5717.54	7422.21	4982.66
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LHMLLEVCQFSR	LHMLLEVC(UniMod:4)QFSR	3	LHMLLEVC(UniMod:4)QFSR3	18317.5	23841.8	15915.5
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	LHNAGSVNAWSAK	LHNAGSVNAWSAK	2	LHNAGSVNAWSAK2	27346.2	24103.1	16317.5
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	LHNAGSVNAWSAK	LHNAGSVNAWSAK	3	LHNAGSVNAWSAK3	68447.9	102958	71102.7
Q9JMA8	Q9JMA8	Q9JMA8_RAT	Extl3	Exostosin-like glycosyltransferase 3	1	LHNCFDYSR	LHNC(UniMod:4)FDYSR	3	LHNC(UniMod:4)FDYSR3	6481.02	13493.9	
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	LHNFHQLSAPQPCFTFSHPNR	LHNFHQLSAPQPC(UniMod:4)FTFSHPNR	4	LHNFHQLSAPQPC(UniMod:4)FTFSHPNR4	2253.86	2604.41	
Q63470	Q63470	DYR1A_RAT	Dyrk1a	Dual specificity tyrosine-phosphorylation-regulated kinase 1A	1	LHNILGVETGGPGGR	LHNILGVETGGPGGR	2	LHNILGVETGGPGGR2	4106.79	4434.51	2491.62
Q63470	Q63470	DYR1A_RAT	Dyrk1a	Dual specificity tyrosine-phosphorylation-regulated kinase 1A	1	LHNILGVETGGPGGR	LHNILGVETGGPGGR	3	LHNILGVETGGPGGR3	49920.9	65160.4	50732.3
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	LHNLNAGPSR	LHNLNAGPSR	2	LHNLNAGPSR2	70134.6	57681.4	45217.5
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	LHNLNQESDLK	LHNLNQESDLK	2	LHNLNQESDLK2	64240	63482	43741.8
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	LHNLNQESDLK	LHNLNQESDLK	3	LHNLNQESDLK3	1.22851e+06	1.78512e+06	580472
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	LHNNQLISELESSVVK	LHNNQLISELESSVVK	2	LHNNQLISELESSVVK2	14532.1	14152.5	7659.2
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	LHNNQLISELESSVVK	LHNNQLISELESSVVK	3	LHNNQLISELESSVVK3	83700.3	81232.3	77064
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	LHNSLIGTK	LHNSLIGTK	2	LHNSLIGTK2	7495.68	7841.9	13531.7
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	LHNSLNEK	LHNSLNEK	2	LHNSLNEK2	3788.14		43282.8
B2RYU6	B2RYU6	TPC2L_RAT	Trappc2l	Trafficking protein particle complex subunit 2-like protein	1	LHNSYTDVMCNPFYNPGDR	LHNSYTDVMC(UniMod:4)NPFYNPGDR	3	LHNSYTDVMC(UniMod:4)NPFYNPGDR3	35646.3	36379.4	34365.7
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	LHNVFNDFLMLSNTQFIENR	LHNVFNDFLMLSNTQFIENR	3	LHNVFNDFLMLSNTQFIENR3	15948.2	10759.3	14442.4
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	LHPAGATIHFSCAPGYVLK	LHPAGATIHFSC(UniMod:4)APGYVLK	3	LHPAGATIHFSC(UniMod:4)APGYVLK3	19478.3	12319.1	14105.7
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	LHPAGATIHFSCAPGYVLK	LHPAGATIHFSC(UniMod:4)APGYVLK	4	LHPAGATIHFSC(UniMod:4)APGYVLK4	10558.1	21155.2	11085.5
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	LHPDDVAGIQALYGK	LHPDDVAGIQALYGK	2	LHPDDVAGIQALYGK2	57211.2	48691.8	59078.1
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	LHPDDVAGIQALYGK	LHPDDVAGIQALYGK	3	LHPDDVAGIQALYGK3	82149.1	87219.9	133961
Q498R3	Q498R3	DJC10_RAT	Dnajc10	DnaJ homolog subfamily C member 10	1	LHPDKNPNNPNAHGDFLK	LHPDKNPNNPNAHGDFLK	4	LHPDKNPNNPNAHGDFLK4	6222.58	10263	8691.32
Q5PQZ9	Q5PQZ9;A0A8I6GJJ7	Q5PQZ9_RAT	Ndufc2	NADH dehydrogenase [ubiquinone] 1 subunit C2	0	LHPEDFPEKEK	LHPEDFPEKEK	3	LHPEDFPEKEK3	46127.4	40534.6	49300
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	LHPETLLWSQCLR	LHPETLLWSQC(UniMod:4)LR	3	LHPETLLWSQC(UniMod:4)LR3		18177	9289.23
Q6PDV7	A0A8I6G4V0;Q6PDV7	RL10_RAT	Rpl10	Large ribosomal subunit protein uL16	0	LHPFHVIR	LHPFHVIR	2	LHPFHVIR2	35072.5	7660.85	
Q5M936	Q5M936	TOR3A_RAT	Tor3a	Torsin-3A	1	LHPGLLELLEPYLEPR	LHPGLLELLEPYLEPR	3	LHPGLLELLEPYLEPR3	14623	18506.2	11550
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	LHPHEVYLDPADATDPR	LHPHEVYLDPADATDPR	3	LHPHEVYLDPADATDPR3			2020.48
P05708	P27926;M0R3X7;P05708	HXK1_RAT	Hk1	Hexokinase-1	0	LHPHFSR	LHPHFSR	2	LHPHFSR2		65859.1	
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	LHPNYISQEELQR	LHPNYISQEELQR	3	LHPNYISQEELQR3	25654.4	29959.2	22471.2
P23097	P23097	MMP13_RAT	Mmp13	Collagenase 3 (Fragment)	1	LHPQQVEPELFLTK	LHPQQVEPELFLTK	3	LHPQQVEPELFLTK3	4814.66	3679.86	7624.6
D4AC36	D4AC36	D4AC36_RAT	Eif3f	Eukaryotic translation initiation factor 3 subunit F	1	LHPVILASIVDSYER	LHPVILASIVDSYER	3	LHPVILASIVDSYER3	195135	152260	188675
D4AC36	D4AC36	D4AC36_RAT	Eif3f	Eukaryotic translation initiation factor 3 subunit F	1	LHPVILASIVDSYERR	LHPVILASIVDSYERR	4	LHPVILASIVDSYERR4	2765.43		5389.61
G3V8R8	G3V8R8	G3V8R8_RAT	Kcnk6	Potassium channel subfamily K member	1	LHQDEDDQVDILDAR	LHQDEDDQVDILDAR	2	LHQDEDDQVDILDAR2	1908.55	2023.68	2765.08
G3V8R8	G3V8R8	G3V8R8_RAT	Kcnk6	Potassium channel subfamily K member	1	LHQDEDDQVDILDAR	LHQDEDDQVDILDAR	3	LHQDEDDQVDILDAR3	85440.1	86010.5	81905.8
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	LHQDPGQPLYILWNAHSQNR	LHQDPGQPLYILWNAHSQNR	4	LHQDPGQPLYILWNAHSQNR4	15068.4	14624.7	16420.7
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	LHQEDNDYINASLIK	LHQEDNDYINASLIK	2	LHQEDNDYINASLIK2	15005.5	4599.66	8036.48
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	LHQEDNDYINASLIK	LHQEDNDYINASLIK	3	LHQEDNDYINASLIK3	137281	149395	160143
Q920H8	Q920H8	HEPH_RAT	Heph	Hephaestin	1	LHQEEETHLGILGPVIR	LHQEEETHLGILGPVIR	4	LHQEEETHLGILGPVIR4	3937.99	2599.13	4523.95
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	LHQELGAK	LHQELGAK	2	LHQELGAK2	8070.43	10227.3	7213.53
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	LHQEPVPTDLALK	LHQEPVPTDLALK	2	LHQEPVPTDLALK2	50020	34901	34215.5
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	LHQEPVPTDLALK	LHQEPVPTDLALK	3	LHQEPVPTDLALK3	344044	402012	399285
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LHQFFRDMDDEESWIK	LHQFFRDMDDEESWIK	3	LHQFFRDMDDEESWIK3	9136.21	17821	13876.6
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LHQFFRDMDDEESWIK	LHQFFRDMDDEESWIK	4	LHQFFRDMDDEESWIK4	13668.2	13758.3	13394.2
A0A8I6AL39	A0A8I6AL39	A0A8I6AL39_RAT	Fgd3	FYVE, RhoGEF and PH domain containing 3	1	LHQGSQTWWLSAPSTK	LHQGSQTWWLSAPSTK	3	LHQGSQTWWLSAPSTK3	6797.19	5738.41	
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	LHQLDAEK	LHQLDAEK	2	LHQLDAEK2		9819.92	
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	LHQLDAEKER	LHQLDAEKER	2	LHQLDAEKER2	13769.2	6848.85	8358.14
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	LHQLDAEKER	LHQLDAEKER	3	LHQLDAEKER3	59986.8	34202.3	78997
F1LXF5	F1LXF5	F1LXF5_RAT	Get4	Guided entry of tail-anchored proteins factor 4	1	LHQLLALTLWK	LHQLLALTLWK	2	LHQLLALTLWK2	9658.79	7243.73	9990.93
F1LXF5	F1LXF5	F1LXF5_RAT	Get4	Guided entry of tail-anchored proteins factor 4	1	LHQLLALTLWK	LHQLLALTLWK	3	LHQLLALTLWK3	39536.4	43662.6	38773.9
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	LHQLSGSEQLEATAHSR	LHQLSGSEQLEATAHSR	3	LHQLSGSEQLEATAHSR3	4322.7		4255.24
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	LHQLSGSEQLEATAHSR	LHQLSGSEQLEATAHSR	4	LHQLSGSEQLEATAHSR4	3703.4	9920.69	12168.1
Q3ZU82	Q3ZU82	GOGA5_RAT	Golga5	Golgin subfamily A member 5	1	LHQLTETLIQK	LHQLTETLIQK	3	LHQLTETLIQK3	5160.94		3552.61
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	LHQMSVADSGEYVCR	LHQMSVADSGEYVC(UniMod:4)R	2	LHQMSVADSGEYVC(UniMod:4)R2		2910.59	1431.7
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	LHQMSVADSGEYVCR	LHQMSVADSGEYVC(UniMod:4)R	3	LHQMSVADSGEYVC(UniMod:4)R3	26866.8	45749.4	39249.9
Q6P6S9	Q6P6S9	ENTP5_RAT	Entpd5	Ectonucleoside triphosphate diphosphohydrolase 5	1	LHQPEEIR	LHQPEEIR	2	LHQPEEIR2	32643	25299.6	19709.4
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	LHQVSPVDSGEYVCR	LHQVSPVDSGEYVC(UniMod:4)R	2	LHQVSPVDSGEYVC(UniMod:4)R2	10073.6	6342.39	6084.86
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	LHQVSPVDSGEYVCR	LHQVSPVDSGEYVC(UniMod:4)R	3	LHQVSPVDSGEYVC(UniMod:4)R3	54450.6	50389.1	72555
A0A8I6ACK9	A0A8I6ACK9	A0A8I6ACK9_RAT	Abcg3l3	ATP-binding cassette, subfamily G (WHITE), member 3-like 3	1	LHQVTEK	LHQVTEK	2	LHQVTEK2			7915.21
Q01460	Q01460	DIAC_RAT	Ctbs	Di-N-acetylchitobiase	1	LHQVWYDNPR	LHQVWYDNPR	3	LHQVWYDNPR3	23738.3	16216.3	16090.9
P07825	P07825	SYPH_RAT	Syp	Synaptophysin	1	LHQVYFDAPSCVK	LHQVYFDAPSC(UniMod:4)VK	3	LHQVYFDAPSC(UniMod:4)VK3	4043.93	5210.9	5009.25
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	LHREDFEILK	LHREDFEILK	3	LHREDFEILK3	31460.3	42941.7	36237.2
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	LHRPQALVLSTSGVIATNTR	LHRPQALVLSTSGVIATNTR	3	LHRPQALVLSTSGVIATNTR3	3104.33		
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	LHRPQALVLSTSGVIATNTR	LHRPQALVLSTSGVIATNTR	4	LHRPQALVLSTSGVIATNTR4	8320.68	5345.28	8586.2
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	LHRPVTFTDYVVPLCLPER	LHRPVTFTDYVVPLC(UniMod:4)LPER	3	LHRPVTFTDYVVPLC(UniMod:4)LPER3	1.80166e+06	2.16776e+06	1.90874e+06
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	LHRPVTFTDYVVPLCLPER	LHRPVTFTDYVVPLC(UniMod:4)LPER	4	LHRPVTFTDYVVPLC(UniMod:4)LPER4	626637	820393	772224
A0A0G2K4S7	A0A0G2K4S7	A0A0G2K4S7_RAT	Usp45	Ubiquitin carboxyl-terminal hydrolase	1	LHSAQNAFQTLSQSYVTTSK	LHSAQNAFQTLSQSYVTTSK	3	LHSAQNAFQTLSQSYVTTSK3	2249.51	2023.22	4053.02
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	LHSAQNCLPFQK	LHSAQNC(UniMod:4)LPFQK	3	LHSAQNC(UniMod:4)LPFQK3	22300.5	29332	17119.2
G3V8Y8	F1LML7;G3V8Y8	G3V8Y8_RAT	Hip1	Huntingtin interacting protein 1	0	LHSCLPADTLQGHR	LHSC(UniMod:4)LPADTLQGHR	3	LHSC(UniMod:4)LPADTLQGHR3	3104.82		
F1MAH6	F1MAH6	F1MAH6_RAT	Cdh11	Cadherin 11	1	LHSDIDSGDGNIK	LHSDIDSGDGNIK	2	LHSDIDSGDGNIK2	5264.55		
F1MAH6	F1MAH6	F1MAH6_RAT	Cdh11	Cadherin 11	1	LHSDIDSGDGNIK	LHSDIDSGDGNIK	3	LHSDIDSGDGNIK3	14098.1	9759.75	16637.6
F1LM81	F1LM81	TM1L1_RAT	Tom1l1	TOM1-like protein 1	1	LHSELDMVK	LHSELDMVK	2	LHSELDMVK2	3615.32		3287.24
P05504	P05504	ATP6_RAT	Mt-atp6	ATP synthase subunit a	1	LHSFQHWLIK	LHSFQHWLIK	3	LHSFQHWLIK3	17629	17180.7	10305.8
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	LHSFVGDDIFLR	LHSFVGDDIFLR	2	LHSFVGDDIFLR2	28929.8	19416.5	19292.8
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	LHSFVGDDIFLR	LHSFVGDDIFLR	3	LHSFVGDDIFLR3	128976	142479	146103
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	LHSISSIDVNGGGR	LHSISSIDVNGGGR	2	LHSISSIDVNGGGR2	1693.06	2363.31	2406.84
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	LHSISSIDVNGGGR	LHSISSIDVNGGGR	3	LHSISSIDVNGGGR3	31872.4	42393	31091.7
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	LHSLFMSR	LHSLFMSR	2	LHSLFMSR2	23389.3	18005.7	20488.5
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	LHSLHLEHSCLGHVR	LHSLHLEHSC(UniMod:4)LGHVR	2	LHSLHLEHSC(UniMod:4)LGHVR2	15778.8	14915.6	4542.88
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	LHSLHLEHSCLGHVR	LHSLHLEHSC(UniMod:4)LGHVR	3	LHSLHLEHSC(UniMod:4)LGHVR3	31476.5	28907.7	48171.9
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	LHSLHLEHSCLGHVR	LHSLHLEHSC(UniMod:4)LGHVR	4	LHSLHLEHSC(UniMod:4)LGHVR4	231316	327460	251596
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	LHSLLGDYYQAIK	LHSLLGDYYQAIK	2	LHSLLGDYYQAIK2	17183.8	11960.3	9556.69
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	LHSLLGDYYQAIK	LHSLLGDYYQAIK	3	LHSLLGDYYQAIK3	81222.6	68659.7	66905
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LHSLQPHACFR	LHSLQPHAC(UniMod:4)FR	3	LHSLQPHAC(UniMod:4)FR3	48491.1	51038.8	57069.9
Q9QX69	Q9QX69	LANC1_RAT	Lancl1	Glutathione S-transferase LANCL1	1	LHSLVKPSVDFVCQLK	LHSLVKPSVDFVC(UniMod:4)QLK	4	LHSLVKPSVDFVC(UniMod:4)QLK4	17211.5	28536.6	21933.3
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	LHSMIVDLDSVVK	LHSMIVDLDSVVK	2	LHSMIVDLDSVVK2	13198.5	7020.49	15102.6
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	LHSMIVDLDSVVK	LHSMIVDLDSVVK	3	LHSMIVDLDSVVK3	89821.8	92966.8	107414
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	LHSMIVDLDSVVKK	LHSMIVDLDSVVKK	3	LHSMIVDLDSVVKK3	9056.01	13047.1	10677.5
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	LHSMIVDLDSVVKK	LHSMIVDLDSVVKK	4	LHSMIVDLDSVVKK4	19574.5	20633.9	21140
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	LHSNHLFCDCHLAWLSQWLR	LHSNHLFC(UniMod:4)DC(UniMod:4)HLAWLSQWLR	4	LHSNHLFC(UniMod:4)DC(UniMod:4)HLAWLSQWLR4	2803.28	6263.3	4659.83
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	LHSNPSAFNIYCNVR	LHSNPSAFNIYC(UniMod:4)NVR	2	LHSNPSAFNIYC(UniMod:4)NVR2	911.476	1389.25	
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	LHSNPSAFNIYCNVR	LHSNPSAFNIYC(UniMod:4)NVR	3	LHSNPSAFNIYC(UniMod:4)NVR3	24075.2	24564.1	29775.2
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	LHSQDHILNR	LHSQDHILNR	2	LHSQDHILNR2	23705.9	6250.5	9538.69
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	LHSQDHILNR	LHSQDHILNR	3	LHSQDHILNR3	71826.3	130556	121512
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	LHSQEEDFR	LHSQEEDFR	3	LHSQEEDFR3	11419.2	10495.3	9782.28
A0A0G2JUU7	A0A0G2JUU7	A0A0G2JUU7_RAT	Tubgcp3	Gamma-tubulin complex component	1	LHSQGVLK	LHSQGVLK	2	LHSQGVLK2	3813.54		
O08776	O08776	NDUF3_RAT	Ndufaf3	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3	1	LHSQVLQAMR	LHSQVLQAMR	3	LHSQVLQAMR3		3116.42	8630.98
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	LHSSQMESEPK	LHSSQMESEPK	2	LHSSQMESEPK2	163915		138949
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	LHSSQMESEPK	LHSSQMESEPK	3	LHSSQMESEPK3	298333		303009
D4A0J7	D4A0J7	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	1	LHSVTTK	LHSVTTK	1	LHSVTTK1			562.282
D4A0J7	D4A0J7	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	1	LHSVTTK	LHSVTTK	2	LHSVTTK2			131029
A0A0G2JT44	A0A0G2JT44	A0A0G2JT44_RAT	Tmc6	Transmembrane channel-like protein	1	LHSVYEEEGMSRPGR	LHSVYEEEGMSRPGR	3	LHSVYEEEGMSRPGR3	49522.8	60132.6	57649.1
A0A0G2JT44	A0A0G2JT44	A0A0G2JT44_RAT	Tmc6	Transmembrane channel-like protein	1	LHSVYEEEGMSRPGR	LHSVYEEEGMSRPGR	4	LHSVYEEEGMSRPGR4	80314	102416	72542.2
P35000	P35000	VIPR2_RAT	Vipr2	Vasoactive intestinal polypeptide receptor 2	1	LHSWSMSR	LHSWSMSR	2	LHSWSMSR2	6469.96	6089.05	
P41565	P41565	IDHG1_RAT	Idh3g	Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial	1	LHSYATSIR	LHSYATSIR	2	LHSYATSIR2	25624.4	19503.1	20001.4
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	LHTALSELCFSINYVPNMAVWEHTFTPR	LHTALSELC(UniMod:4)FSINYVPNMAVWEHTFTPR	4	LHTALSELC(UniMod:4)FSINYVPNMAVWEHTFTPR4	27951.5	23399.9	21606.7
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	LHTDDELNWLDHGR	LHTDDELNWLDHGR	2	LHTDDELNWLDHGR2	98413.8	100112	67265.3
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	LHTDDELNWLDHGR	LHTDDELNWLDHGR	3	LHTDDELNWLDHGR3	890011	856566	815598
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	LHTDDELNWLDHGR	LHTDDELNWLDHGR	4	LHTDDELNWLDHGR4	1.60263e+06	1.50068e+06	1.68918e+06
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	LHTEEAIR	LHTEEAIR	2	LHTEEAIR2	30389.1	21907	30620.1
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	LHTFAGLSGLR	LHTFAGLSGLR	2	LHTFAGLSGLR2	181182	164790	194734
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	LHTFAGLSGLR	LHTFAGLSGLR	3	LHTFAGLSGLR3	5.8684e+06	6.76917e+06	6.77096e+06
Q71UF4	Q71UF4	RBBP7_RAT	Rbbp7	Histone-binding protein RBBP7	1	LHTFESHK	LHTFESHK	2	LHTFESHK2	41060.3		
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	LHTFLTTSLPAYR	LHTFLTTSLPAYR	3	LHTFLTTSLPAYR3	22086	23216.6	19090.8
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	LHTLGDNLLDSR	LHTLGDNLLDSR	2	LHTLGDNLLDSR2	14128.9	13729.4	12862.8
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	LHTLGDNLLDSR	LHTLGDNLLDSR	3	LHTLGDNLLDSR3	149224	149910	158627
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LHTLLQTAVPTR	LHTLLQTAVPTR	2	LHTLLQTAVPTR2	17500.1	19128.8	7232.58
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LHTLLQTAVPTR	LHTLLQTAVPTR	3	LHTLLQTAVPTR3	143081	145543	143379
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LHTLLQTAVPTRR	LHTLLQTAVPTRR	3	LHTLLQTAVPTRR3	43840	36737.6	56998.5
F1LLW8	F1LLW8	F1LLW8_RAT	Ids	Iduronate 2-sulfatase	1	LHTNLLCPVDVADVPEGTLPDK	LHTNLLC(UniMod:4)PVDVADVPEGTLPDK	3	LHTNLLC(UniMod:4)PVDVADVPEGTLPDK3	6483.65	11219.4	10052.9
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	LHTPLLTR	LHTPLLTR	2	LHTPLLTR2	81026.2	58828.5	52271.7
Q5I0C3	Q5I0C3	MCCA_RAT	Mccc1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	1	LHTQDQFSPFSFSSGR	LHTQDQFSPFSFSSGR	3	LHTQDQFSPFSFSSGR3	20070.2	13428.7	15354.2
Q8VD48	Q8VD48	DHRS9_RAT	Dhrs9	Dehydrogenase/reductase SDR family member 9	1	LHTVLLDVTNPENVK	LHTVLLDVTNPENVK	3	LHTVLLDVTNPENVK3	4284.04	2554.83	5951.54
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	LHTVNVLVPPTIK	LHTVNVLVPPTIK	3	LHTVNVLVPPTIK3	17371.4	13000.9	9194.44
P36372	P36372	TAP2_RAT	Tap2	Antigen peptide transporter 2	1	LHTVQNADQVLVLK	LHTVQNADQVLVLK	2	LHTVQNADQVLVLK2	5522.91	8070.81	4264.89
P36372	P36372	TAP2_RAT	Tap2	Antigen peptide transporter 2	1	LHTVQNADQVLVLK	LHTVQNADQVLVLK	3	LHTVQNADQVLVLK3	34592.4	55581.2	48249.7
O88321	O88321	O88321_RAT	Psmd4	26S proteasome non-ATPase regulatory subunit 4	1	LHTVQPK	LHTVQPK	2	LHTVQPK2			167321
P15651	P15651	ACADS_RAT	Acads	Short-chain specific acyl-CoA dehydrogenase, mitochondrial	1	LHTVYQSVELPETHQMLR	LHTVYQSVELPETHQMLR	3	LHTVYQSVELPETHQMLR3	3481.67	2377.16	3064.25
P15651	P15651	ACADS_RAT	Acads	Short-chain specific acyl-CoA dehydrogenase, mitochondrial	1	LHTVYQSVELPETHQMLR	LHTVYQSVELPETHQMLR	4	LHTVYQSVELPETHQMLR4	49376.8	44907.1	46446.5
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	LHTYLAGDAPTLADLAAVTALLLPFR	LHTYLAGDAPTLADLAAVTALLLPFR	3	LHTYLAGDAPTLADLAAVTALLLPFR3	4626.16		
P02091	P11517;P02091	HBB1_RAT	Hbb	Hemoglobin subunit beta-1	0	LHVDPENFR	LHVDPENFR	2	LHVDPENFR2	588414	516211	494860
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	LHVEGER	LHVEGER	2	LHVEGER2	46880.6	88451.7	98118.6
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	LHVENEDK	LHVENEDK	2	LHVENEDK2			19085.4
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	LHVENEDKK	LHVENEDKK	2	LHVENEDKK2			2514.23
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	LHVLCQGWR	LHVLC(UniMod:4)QGWR	2	LHVLC(UniMod:4)QGWR2	3585.39		7082.96
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	LHVLCQGWR	LHVLC(UniMod:4)QGWR	3	LHVLC(UniMod:4)QGWR3	3805.19	7094.84	2176.01
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	LHVLDTR	LHVLDTR	2	LHVLDTR2	1.78432e+06	1.72966e+06	1.64448e+06
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	LHVLEEELLALK	LHVLEEELLALK	2	LHVLEEELLALK2	9562.81		7348.8
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	LHVLEEELLALK	LHVLEEELLALK	3	LHVLEEELLALK3	20714.8	16787.4	14001.9
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	LHVLLNK	LHVLLNK	2	LHVLLNK2	4234.97	4870.9	
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LHVNWVVSELTLGQIWDVDLQK	LHVNWVVSELTLGQIWDVDLQK	3	LHVNWVVSELTLGQIWDVDLQK3	1290.26	4350.97	1999.74
Q5XIA1	Q5XIA1	NCLN_RAT	Ncln	BOS complex subunit NCLN	1	LHVSKPPR	LHVSKPPR	2	LHVSKPPR2			2301.77
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	LHVSTINLQK	LHVSTINLQK	2	LHVSTINLQK2	6431.43	9634.03	
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	LHVSTINLQK	LHVSTINLQK	3	LHVSTINLQK3	23775.4	22333.7	24409.5
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	LHVVVSK	LHVVVSK	2	LHVVVSK2	15245.8	12270.7	12966.7
P62856	D3Z8D7;P62856;A0A0G2K5P4;A0A0G2JY64;D3ZJ54;A0A8I5ZY57;A0A0G2K743	RS26_RAT	Rps26	Small ribosomal subunit protein eS26	0	LHYCVSCAIHSK	LHYC(UniMod:4)VSC(UniMod:4)AIHSK	3	LHYC(UniMod:4)VSC(UniMod:4)AIHSK3	3114		1718.89
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	LHYDPAELK	LHYDPAELK	2	LHYDPAELK2	10175.4	8280.53	10135.7
Q3MHS7	Q3MHS7	Q3MHS7_RAT	Gmds	GDP-mannose 4,6-dehydratase	1	LHYGDLTDSTCLVK	LHYGDLTDSTC(UniMod:4)LVK	3	LHYGDLTDSTC(UniMod:4)LVK3	25182.8	16833.5	24964.9
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	LHYHGDVEADLHR	LHYHGDVEADLHR	4	LHYHGDVEADLHR4	2973.79	2135.51	3372.14
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	LHYMFSALR	LHYMFSALR	2	LHYMFSALR2	9268.79	13147.3	6550.95
P50411	A0A8I6AM35;P50411	IPP2_RAT	Ppp1r2	Protein phosphatase inhibitor 2	0	LHYNEGLNIK	LHYNEGLNIK	2	LHYNEGLNIK2	14378	10295.6	9495.84
P50411	A0A8I6AM35;P50411	IPP2_RAT	Ppp1r2	Protein phosphatase inhibitor 2	0	LHYNEGLNIK	LHYNEGLNIK	3	LHYNEGLNIK3	27438.5	38271.7	37239.4
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LHYPMVEYCIPTTSGEDVR	LHYPMVEYC(UniMod:4)IPTTSGEDVR	3	LHYPMVEYC(UniMod:4)IPTTSGEDVR3	30265.5	18773.5	33672.9
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LHYPMVEYCIPTTSGEDVRDFTK	LHYPMVEYC(UniMod:4)IPTTSGEDVRDFTK	3	LHYPMVEYC(UniMod:4)IPTTSGEDVRDFTK3	15839.2	24057.1	15311.8
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LHYPMVEYCIPTTSGEDVRDFTK	LHYPMVEYC(UniMod:4)IPTTSGEDVRDFTK	4	LHYPMVEYC(UniMod:4)IPTTSGEDVRDFTK4	42623.7	53267.3	68534.7
Q2KMM2	Q2KMM2	TPPC1_RAT	Trappc1	Trafficking protein particle complex subunit 1	1	LHYYETPTGIK	LHYYETPTGIK	3	LHYYETPTGIK3	22469.9	17193	18547.6
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	LIAAYCSVGDIEGASK	LIAAYC(UniMod:4)SVGDIEGASK	2	LIAAYC(UniMod:4)SVGDIEGASK2	3125.94		2243.21
Q99N37	Q99N37	RHG17_RAT	Arhgap17	Rho GTPase-activating protein 17	1	LIACFQGQHGTDAER	LIAC(UniMod:4)FQGQHGTDAER	3	LIAC(UniMod:4)FQGQHGTDAER3	1327.29		
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	LIACGSLYQGICK	LIAC(UniMod:4)GSLYQGIC(UniMod:4)K	2	LIAC(UniMod:4)GSLYQGIC(UniMod:4)K2	20510.5	30674.3	14717.1
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	LIADESVSLLAAALR	LIADESVSLLAAALR	2	LIADESVSLLAAALR2	10485	9064.71	17070.8
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	LIADESVSLLAAALR	LIADESVSLLAAALR	3	LIADESVSLLAAALR3	7726.37	4093.6	6063.41
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	LIADLQPNTEYSFVLMNR	LIADLQPNTEYSFVLMNR	3	LIADLQPNTEYSFVLMNR3	9520.77	12280.5	
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	LIADSVLMLR	LIADSVLMLR	2	LIADSVLMLR2	360149	380034	400057
Q5XIP6	Q5XIP6	FEN1_RAT	Fen1	Flap endonuclease 1	1	LIADVAPSAIR	LIADVAPSAIR	2	LIADVAPSAIR2	2559.11		
M0RD40	M0RD40	M0RD40_RAT	Sik3	non-specific serine/threonine protein kinase	1	LIAECQQLK	LIAEC(UniMod:4)QQLK	2	LIAEC(UniMod:4)QQLK2	9514.91		
M0RD40	M0RD40	M0RD40_RAT	Sik3	non-specific serine/threonine protein kinase	1	LIAECQQLKEER	LIAEC(UniMod:4)QQLKEER	3	LIAEC(UniMod:4)QQLKEER3	9437.84	15290.9	9509.67
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	LIAEGTAPR	LIAEGTAPR	2	LIAEGTAPR2	18735.8	19764.5	24225.5
D4ABM5	D4ABM5	D4ABM5_RAT	Mrps34	Mitochondrial ribosomal protein S34	1	LIAELAR	LIAELAR	2	LIAELAR2	27584.6	26892.5	18285.8
Q9QXU2	Q9QXU2	SURF1_RAT	Surf1	Surfeit locus protein 1	1	LIAELESR	LIAELESR	2	LIAELESR2	36533.6	36475.7	38559.8
Q810F4	Q810F4	FAM3C_RAT	Fam3c	Protein FAM3C	1	LIAELGSTSITSLGFR	LIAELGSTSITSLGFR	2	LIAELGSTSITSLGFR2	15852.6	9102.3	16394.5
A0A0G2K8D1	A0A0G2K8D1	A0A0G2K8D1_RAT	Mospd2	Motile sperm domain containing 2	1	LIAFWLER	LIAFWLER	2	LIAFWLER2	14163.5	20909.7	13417.7
D3ZXY2	D3ZXY2	D3ZXY2_RAT	Pdzd8	PDZ domain containing 8	1	LIAIGGVK	LIAIGGVK	2	LIAIGGVK2	9861.71	12964.4	11905.7
D3ZHA0	D3ZHA0;A0A0G2JXT8;A0A8I5ZV49	FLNC_RAT	Flnc	Filamin-C	0	LIALLEVLSQK	LIALLEVLSQK	2	LIALLEVLSQK2	9087.87	18451.2	17996.8
D3ZHA0	D3ZHA0;A0A0G2JXT8;A0A8I5ZV49	FLNC_RAT	Flnc	Filamin-C	0	LIALLEVLSQK	LIALLEVLSQK	3	LIALLEVLSQK3	340373	349777	348718
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	LIALLEVLSQKK	LIALLEVLSQKK	2	LIALLEVLSQKK2	19718.6	19296	12887.6
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	LIALLEVLSQKK	LIALLEVLSQKK	3	LIALLEVLSQKK3	424547	461867	490597
D3ZHA0	D3ZHA0;A0A0G2JXT8	FLNC_RAT	Flnc	Filamin-C	0	LIALLEVLSQKR	LIALLEVLSQKR	3	LIALLEVLSQKR3	7396.98	7445.62	10715
O35244	O35244	PRDX6_RAT	Prdx6	Peroxiredoxin-6	1	LIALSIDSVEDHFAWSK	LIALSIDSVEDHFAWSK	3	LIALSIDSVEDHFAWSK3	18921.3	14665.5	9639.48
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	LIAMYTDGAEVWDTK	LIAMYTDGAEVWDTK	2	LIAMYTDGAEVWDTK2	11697.2	12212.8	11602.3
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	LIANALCNSR	LIANALC(UniMod:4)NSR	2	LIANALC(UniMod:4)NSR2	2.04481e+06	2.32515e+06	2.12987e+06
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	LIANDDMAELLLGESK	LIANDDMAELLLGESK	2	LIANDDMAELLLGESK2	10272.6		18248.7
Q8R4A1	Q8R4A1	ERO1A_RAT	Ero1a	ERO1-like protein alpha	1	LIANMPESGPSYEFQLTR	LIANMPESGPSYEFQLTR	3	LIANMPESGPSYEFQLTR3	6727.72	9804.03	13243.6
P42123	P42123	LDHB_RAT	Ldhb	L-lactate dehydrogenase B chain	1	LIAPVADDETAVPNNK	LIAPVADDETAVPNNK	2	LIAPVADDETAVPNNK2	32394.9	24071.7	29222
M0R6Q0	M0R6Q0	M0R6Q0_RAT	Casd1	CAS1 domain containing 1	1	LIAQETIMESLDGLHLPESSR	LIAQETIMESLDGLHLPESSR	3	LIAQETIMESLDGLHLPESSR3	37554.5	19239.4	21704.2
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	LIASSLVAGEK	LIASSLVAGEK	2	LIASSLVAGEK2	102727	90733.6	91170.7
D3ZBP3	D3ZBP3	D3ZBP3_RAT	Exosc2	Ribosomal RNA-processing protein 4	1	LIASVAGSVER	LIASVAGSVER	2	LIASVAGSVER2	7318.52	8643.4	7564.12
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	LIATFPDTLTYSAYR	LIATFPDTLTYSAYR	2	LIATFPDTLTYSAYR2	796554	734369	786164
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	LIATFPDTLTYSAYR	LIATFPDTLTYSAYR	3	LIATFPDTLTYSAYR3	72052	82594.7	87938.1
B5DFF2	B5DFF2	B5DFF2_RAT	Rbpms2	RNA binding protein, mRNA processing factor 2	1	LIATPNPTSVHPALGAHLIAR	LIATPNPTSVHPALGAHLIAR	3	LIATPNPTSVHPALGAHLIAR3	19527.8	16648.3	3437.93
B5DFF2	B5DFF2	B5DFF2_RAT	Rbpms2	RNA binding protein, mRNA processing factor 2	1	LIATPNPTSVHPALGAHLIAR	LIATPNPTSVHPALGAHLIAR	4	LIATPNPTSVHPALGAHLIAR4	95068.3	91701.7	103593
Q7TPL3	Q7TPL3	BACD3_RAT	Kctd10	BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3	1	LIATSDKPAVK	LIATSDKPAVK	3	LIATSDKPAVK3	17141.2	10262.6	13965.6
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	LIATTAHEK	LIATTAHEK	2	LIATTAHEK2	66052.3	61927.7	56685.2
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	LIAVFDEQEPLQK	LIAVFDEQEPLQK	2	LIAVFDEQEPLQK2	7774.27	8615.07	7195.68
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	LIAVLESIER	LIAVLESIER	2	LIAVLESIER2	27611.4	35231.4	26374.7
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	LIAYGHITGNAPDSGAPGK	LIAYGHITGNAPDSGAPGK	3	LIAYGHITGNAPDSGAPGK3		38740.6	38750.3
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	LIAYGHITGNAPDSGAPGKR	LIAYGHITGNAPDSGAPGKR	3	LIAYGHITGNAPDSGAPGKR3	2823.12		
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	LIAYGHITGNAPDSGAPGKR	LIAYGHITGNAPDSGAPGKR	4	LIAYGHITGNAPDSGAPGKR4	16260	10004.7	12603.2
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	LIAYGHLTGSAPDSTTPGK	LIAYGHLTGSAPDSTTPGK	3	LIAYGHLTGSAPDSTTPGK3	8970.99	12989	8960.36
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	LIAYGHLTGSAPDSTTPGKK	LIAYGHLTGSAPDSTTPGKK	3	LIAYGHLTGSAPDSTTPGKK3	3252.02		
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	LIAYGHLTGSAPDSTTPGKK	LIAYGHLTGSAPDSTTPGKK	4	LIAYGHLTGSAPDSTTPGKK4	4163.45	8568.32	6683.23
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	LICCDILDVLDK	LIC(UniMod:4)C(UniMod:4)DILDVLDK	2	LIC(UniMod:4)C(UniMod:4)DILDVLDK2	98006.6	88141.3	89395.6
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	LICCDILDVLDK	LIC(UniMod:4)C(UniMod:4)DILDVLDK	3	LIC(UniMod:4)C(UniMod:4)DILDVLDK3		6908.38	
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	LICCDILDVLDKHLIPAANTGESK	LIC(UniMod:4)C(UniMod:4)DILDVLDKHLIPAANTGESK	3	LIC(UniMod:4)C(UniMod:4)DILDVLDKHLIPAANTGESK3	70277.6	72858.9	83189.1
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	LICCDILDVLDKHLIPAANTGESK	LIC(UniMod:4)C(UniMod:4)DILDVLDKHLIPAANTGESK	4	LIC(UniMod:4)C(UniMod:4)DILDVLDKHLIPAANTGESK4	640422	725567	649208
Q68FS6	Q68FS6	PYRD1_RAT	Pyroxd1	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1	1	LICEGNPYVLGIR	LIC(UniMod:4)EGNPYVLGIR	2	LIC(UniMod:4)EGNPYVLGIR2	3019.68	2968.22	
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	LICGFMDDCK	LIC(UniMod:4)GFMDDC(UniMod:4)K	2	LIC(UniMod:4)GFMDDC(UniMod:4)K2	22225.7	25560.5	22857.7
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	LICPAILNPR	LIC(UniMod:4)PAILNPR	2	LIC(UniMod:4)PAILNPR2	15397.4	13083.3	10513.1
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	LICTHEGTWSHPAPYCK	LIC(UniMod:4)THEGTWSHPAPYC(UniMod:4)K	3	LIC(UniMod:4)THEGTWSHPAPYC(UniMod:4)K3	7126.48	4149.26	3389.79
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	LICTHEGTWSHPAPYCK	LIC(UniMod:4)THEGTWSHPAPYC(UniMod:4)K	4	LIC(UniMod:4)THEGTWSHPAPYC(UniMod:4)K4	36450.3	40771.8	54203.7
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	LIDAEDEK	LIDAEDEK	2	LIDAEDEK2	181782	209938	241557
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	LIDAEDEKR	LIDAEDEKR	2	LIDAEDEKR2	7131.65	9455.63	4259.17
Q4KLZ6	Q4KLZ6	TKFC_RAT	Tkfc	Triokinase/FMN cyclase	1	LIDAETNAK	LIDAETNAK	2	LIDAETNAK2	19640.5	20050.6	22647.2
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	LIDALESHR	LIDALESHR	2	LIDALESHR2	10594.7	8216.31	7258.23
P41562	P41562	IDHC_RAT	Idh1	Isocitrate dehydrogenase [NADP] cytoplasmic	1	LIDDMVAQAMK	LIDDMVAQAMK	2	LIDDMVAQAMK2	32833	26520.1	27956.5
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	LIDDMVAQVLK	LIDDMVAQVLK	2	LIDDMVAQVLK2	351173	355683	366721
P86252	P86252	PURA_RAT	Pura	Transcriptional activator protein Pur-alpha	1	LIDDYGVEEEPAELPEGTSLTVDNK	LIDDYGVEEEPAELPEGTSLTVDNK	3	LIDDYGVEEEPAELPEGTSLTVDNK3	99717.5	93781.5	117221
P86252	P86252	PURA_RAT	Pura	Transcriptional activator protein Pur-alpha	1	LIDDYGVEEEPAELPEGTSLTVDNKR	LIDDYGVEEEPAELPEGTSLTVDNKR	3	LIDDYGVEEEPAELPEGTSLTVDNKR3	35637.7	36003	33603.5
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	LIDELENSQK	LIDELENSQK	2	LIDELENSQK2	27196.2	43051.4	39285.2
D3ZTJ0	D3ZTJ0	D3ZTJ0_RAT	Rp2	Protein XRP2	1	LIDEMVGK	LIDEMVGK	2	LIDEMVGK2	26960.2	30001	40575.1
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	LIDFGLAR	LIDFGLAR	2	LIDFGLAR2	1.13791e+06	1.31885e+06	1.16785e+06
P11661	P11661	NU5M_RAT	Mtnd5	NADH-ubiquinone oxidoreductase chain 5	1	LIDFPSYATSSIK	LIDFPSYATSSIK	2	LIDFPSYATSSIK2	12069.4	6467.71	5644.85
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	LIDFSAQIAEGMAYIER	LIDFSAQIAEGMAYIER	2	LIDFSAQIAEGMAYIER2	63714.9	56708.3	60282.9
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	LIDFSAQIAEGMAYIER	LIDFSAQIAEGMAYIER	3	LIDFSAQIAEGMAYIER3	36522.2	48201.5	40473.9
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	LIDGIVLTK	LIDGIVLTK	2	LIDGIVLTK2	71020.8	68271.2	55845.5
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	LIDIFYPGDQQSVTFGTK	LIDIFYPGDQQSVTFGTK	3	LIDIFYPGDQQSVTFGTK3	14105.4	15887	16921
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	LIDIGNSCR	LIDIGNSC(UniMod:4)R	2	LIDIGNSC(UniMod:4)R2	701968	686422	775999
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	LIDILLR	LIDILLR	2	LIDILLR2	11700.3	14224.7	11799.3
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	LIDISIGSLR	LIDISIGSLR	2	LIDISIGSLR2	42031.8	56368.5	40186.7
P20070	P20070	NB5R3_RAT	Cyb5r3	NADH-cytochrome b5 reductase 3	1	LIDKEIISHDTR	LIDKEIISHDTR	3	LIDKEIISHDTR3	51107.9	42826.7	49273.9
P20070	P20070	NB5R3_RAT	Cyb5r3	NADH-cytochrome b5 reductase 3	1	LIDKEIISHDTRR	LIDKEIISHDTRR	3	LIDKEIISHDTRR3	14220.4	15239.8	17137.9
P20070	P20070	NB5R3_RAT	Cyb5r3	NADH-cytochrome b5 reductase 3	1	LIDKEIISHDTRR	LIDKEIISHDTRR	4	LIDKEIISHDTRR4	30330.4	52792.6	58063.7
P60868	D3ZZK1;A0A8I6AG52;A0A0G2K6L6;M0R5V6;P60868;M0R987;M0R566;M0RB28	RS20_RAT	Rps20	Small ribosomal subunit protein uS10	0	LIDLHSPSEIVK	LIDLHSPSEIVK	3	LIDLHSPSEIVK3	74868.5	57513.5	68039.8
Q62991	Q62991	SCFD1_RAT	Scfd1	Sec1 family domain-containing protein 1	1	LIDLHTNVATAVLEHIK	LIDLHTNVATAVLEHIK	3	LIDLHTNVATAVLEHIK3	5717.9	4104.84	3828.9
Q62991	Q62991	SCFD1_RAT	Scfd1	Sec1 family domain-containing protein 1	1	LIDLHTNVATAVLEHIK	LIDLHTNVATAVLEHIK	4	LIDLHTNVATAVLEHIK4	13154.5	12899	11506.9
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	LIDLPEDYSSLINQASNFSCPK	LIDLPEDYSSLINQASNFSC(UniMod:4)PK	3	LIDLPEDYSSLINQASNFSC(UniMod:4)PK3	5812.43		13997.6
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LIDLSIQNYHMFLR	LIDLSIQNYHMFLR	3	LIDLSIQNYHMFLR3	34531.7	27811.2	29256.3
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LIDMSVK	LIDMSVK	2	LIDMSVK2	164931	155691	147823
P31325	P31325	PHKG2_RAT	Phkg2	Phosphorylase b kinase gamma catalytic chain, liver/testis isoform	1	LIDNCAFR	LIDNC(UniMod:4)AFR	2	LIDNC(UniMod:4)AFR2	27998.2	17855.1	26963.6
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	LIDNDHYDSENIAAIR	LIDNDHYDSENIAAIR	3	LIDNDHYDSENIAAIR3	15731.9	11326.1	18063.2
B4F779	B4F779	DP13B_RAT	Appl2	DCC-interacting protein 13-beta	1	LIDPQTQVSR	LIDPQTQVSR	2	LIDPQTQVSR2	11353.3	13182.5	10100.1
D3ZWA8	D3ZWA8	D3ZWA8_RAT	Appl1	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1	1	LIDPQTQVTR	LIDPQTQVTR	2	LIDPQTQVTR2	19174	20488.7	16987.9
F1LRE5	F1LRE5	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	1	LIDSSGSASVLTHSSSGNSLK	LIDSSGSASVLTHSSSGNSLK	3	LIDSSGSASVLTHSSSGNSLK3	18291.2	12977	8314.94
F7FH41	F7FH41	F7FH41_RAT	Csnk2a2	Casein kinase 2 alpha 2	1	LIDTVKDPVSK	LIDTVKDPVSK	2	LIDTVKDPVSK2	2538.58	2590.04	
F7FH41	F7FH41	F7FH41_RAT	Csnk2a2	Casein kinase 2 alpha 2	1	LIDTVKDPVSK	LIDTVKDPVSK	3	LIDTVKDPVSK3	123867	97549.3	96906.3
Q6P7B4	Q6P7B4	GAK1B_RAT	Gask1b	Golgi-associated kinase 1B	1	LIDVIER	LIDVIER	2	LIDVIER2	28028.5	28147.4	24204
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LIDVNHYAK	LIDVNHYAK	2	LIDVNHYAK2	159573	135505	101738
P53565	P53565;A0A8I5ZR58	CUX1_RAT	Cux1	Homeobox protein cut-like 1	0	LIDVPDPVPALDLGQQLEIK	LIDVPDPVPALDLGQQLEIK	3	LIDVPDPVPALDLGQQLEIK3	1999.59		1233.7
F7FH41	F7FH41	F7FH41_RAT	Csnk2a2	Casein kinase 2 alpha 2	1	LIDWGLAEFYHPAQEYNVR	LIDWGLAEFYHPAQEYNVR	3	LIDWGLAEFYHPAQEYNVR3	32899.7	17613.7	14154.9
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	LIDWGLAEFYHPGQEYNVR	LIDWGLAEFYHPGQEYNVR	3	LIDWGLAEFYHPGQEYNVR3	111912	116591	127904
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LIDWLEDAESHLDSELEISNDPDKIK	LIDWLEDAESHLDSELEISNDPDKIK	4	LIDWLEDAESHLDSELEISNDPDKIK4	9407.19	9067.07	4163.65
Q9JLH7	Q9JLH7	CK5P3_RAT	Cdk5rap3	CDK5 regulatory subunit-associated protein 3	1	LIEADISK	LIEADISK	2	LIEADISK2	103469	90078.2	86368
A0A0G2JUG7	A0A8I6GKX8;Q76M68;A0A0G2JUG7	IQEC1_RAT	Iqsec1	IQ motif and SEC7 domain-containing protein 1	0	LIEAFSQR	LIEAFSQR	2	LIEAFSQR2	9184.36	10852.9	10362.6
A0A0G2JSI4	A0A0G2JSI4	A0A0G2JSI4_RAT	Adgre5	Adhesion G protein-coupled receptor E5	1	LIEAVDK	LIEAVDK	2	LIEAVDK2	39376.7	35975.9	29037.2
Q8R3Z7	Q8R3Z7	Q8R3Z7_RAT	Ehd4	EH-domain containing 4	1	LIEAVDNMLTNK	LIEAVDNMLTNK	2	LIEAVDNMLTNK2	72367.4	52402.4	64375.5
Q5U1Z2	Q5U1Z2	TPPC3_RAT	Trappc3	Trafficking protein particle complex subunit 3	1	LIEDFLAR	LIEDFLAR	2	LIEDFLAR2	223289	202599	228044
Q9WUD9	Q9WUD9;Q62844;F1LM93;Q01621	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	0	LIEDNEYTAR	LIEDNEYTAR	2	LIEDNEYTAR2	538251	496887	558137
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	LIEDSTLSK	LIEDSTLSK	2	LIEDSTLSK2	106902	105138	94237.8
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	LIEDTEDWRPR	LIEDTEDWRPR	2	LIEDTEDWRPR2	12301.8	6631.56	13936.9
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	LIEDTEDWRPR	LIEDTEDWRPR	3	LIEDTEDWRPR3	227204	246449	224063
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	LIEECVSQIVLHK	LIEEC(UniMod:4)VSQIVLHK	2	LIEEC(UniMod:4)VSQIVLHK2	2649.57		2723.91
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	LIEECVSQIVLHK	LIEEC(UniMod:4)VSQIVLHK	3	LIEEC(UniMod:4)VSQIVLHK3	71329.7	84117.9	62918.2
P23097	P23097	MMP13_RAT	Mmp13	Collagenase 3 (Fragment)	1	LIEEEFPGIGDK	LIEEEFPGIGDK	2	LIEEEFPGIGDK2	639.027	3235.29	
A0A8I6GK03	A0A8I6GK03	A0A8I6GK03_RAT	Tubgcp4	Gamma-tubulin complex component	1	LIEEENMLAPSLK	LIEEENMLAPSLK	2	LIEEENMLAPSLK2	3306.2	3118.24	3708.1
Q63663	Q63663	GBP2_RAT	Gbp2	Guanylate-binding protein 2	1	LIEEQDNIIALK	LIEEQDNIIALK	2	LIEEQDNIIALK2	32922.1	20838.9	25907
A1L1K3	A1L1K3	APC5_RAT	Anapc5	Anaphase-promoting complex subunit 5	1	LIEESCPQLANSVQIR	LIEESC(UniMod:4)PQLANSVQIR	2	LIEESC(UniMod:4)PQLANSVQIR2	2506.2	3055.22	3024.07
A1L1K3	A1L1K3	APC5_RAT	Anapc5	Anaphase-promoting complex subunit 5	1	LIEESCPQLANSVQIR	LIEESC(UniMod:4)PQLANSVQIR	3	LIEESC(UniMod:4)PQLANSVQIR3	5152.29	1374.98	1167.46
Q63468	Q63468	KPRA_RAT	Prpsap1	Phosphoribosyl pyrophosphate synthase-associated protein 1	1	LIEESPIDEVVVTNTVPHELQK	LIEESPIDEVVVTNTVPHELQK	3	LIEESPIDEVVVTNTVPHELQK3	4081.42	4711.67	8220.44
P62744	P62744	AP2S1_RAT	Ap2s1	AP-2 complex subunit sigma	1	LIEEVHAVVTVR	LIEEVHAVVTVR	3	LIEEVHAVVTVR3	13701.4	16581.5	10455
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	LIEEVMIGEDK	LIEEVMIGEDK	2	LIEEVMIGEDK2	144917	144181	146864
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	LIEFLLK	LIEFLLK	2	LIEFLLK2	156415	179126	159996
A0A0G2JZH0	A0A0G2JZH0	A0A0G2JZH0_RAT	Cab39	Calcium binding protein 39	1	LIEFLSK	LIEFLSK	2	LIEFLSK2	80786.5	61226.6	64649.2
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	LIEFLTTR	LIEFLTTR	2	LIEFLTTR2	107546	133186	120076
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	LIEGVHPGSLVEK	LIEGVHPGSLVEK	2	LIEGVHPGSLVEK2	24990.3	25678.3	22178.4
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	LIEGVHPGSLVEK	LIEGVHPGSLVEK	3	LIEGVHPGSLVEK3	1.08154e+06	936635	976441
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	LIEGVHPGSLVEKLPDSPALAK	LIEGVHPGSLVEKLPDSPALAK	3	LIEGVHPGSLVEKLPDSPALAK3	16808.3	15748.8	20097.9
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	LIEGVHPGSLVEKLPDSPALAK	LIEGVHPGSLVEKLPDSPALAK	4	LIEGVHPGSLVEKLPDSPALAK4	50535.7	47556.1	53534.6
Q704S8	Q704S8	CACP_RAT	Crat	Carnitine O-acetyltransferase	1	LIEGVLDFK	LIEGVLDFK	2	LIEGVLDFK2	10378.5	11147.9	8501.71
D4A3I5	D4A3I5	D4A3I5_RAT	Fhip2a	FHF complex subunit HOOK interacting protein 2A	1	LIEHCDHISDEISIMTLR	LIEHC(UniMod:4)DHISDEISIMTLR	4	LIEHC(UniMod:4)DHISDEISIMTLR4		9917.79	7202.2
A0A8I6AEZ7	A0A8I6AEZ7	A0A8I6AEZ7_RAT	Crlf3	Cytokine receptor-like factor 3	1	LIEHGVNTADDLVR	LIEHGVNTADDLVR	2	LIEHGVNTADDLVR2	26664.1	20141.8	9251.67
A0A8I6AEZ7	A0A8I6AEZ7	A0A8I6AEZ7_RAT	Crlf3	Cytokine receptor-like factor 3	1	LIEHGVNTADDLVR	LIEHGVNTADDLVR	3	LIEHGVNTADDLVR3	377616	405173	416199
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	LIEIHGK	LIEIHGK	2	LIEIHGK2	20770.6	14205.8	17640.1
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	LIEILSEK	LIEILSEK	2	LIEILSEK2	101414	130736	123186
G3V7E6	G3V7E6	G3V7E6_RAT	Pcm1	Pericentriolar material 1	1	LIEIQEK	LIEIQEK	2	LIEIQEK2	294131	274789	295303
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	LIEKGETDLIQK	LIEKGETDLIQK	3	LIEKGETDLIQK3		2255.85	
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	LIELDASFK	LIELDASFK	2	LIELDASFK2	15053.2	12796.6	9883.81
A0A0G2K089	A0A0G2K089	A0A0G2K089_RAT	Dennd4c	DENN domain containing 4C	1	LIELDDSQK	LIELDDSQK	2	LIELDDSQK2	16234.5	24626	22193.4
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	LIENGYFHPVK	LIENGYFHPVK	2	LIENGYFHPVK2	1511.69	1841.94	
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	LIENGYFHPVK	LIENGYFHPVK	3	LIENGYFHPVK3	21275	20993.4	16919.9
A0A0G2K350	A0A0G2K350	A0A0G2K350_RAT	Napg	NSF attachment protein gamma	1	LIENVDPEK	LIENVDPEK	2	LIENVDPEK2	103134	106972	106140
Q5XI52	Q5XI52	VEZA_RAT	Vezt	Vezatin	1	LIEPHVQASNSCWEEAISQVDR	LIEPHVQASNSC(UniMod:4)WEEAISQVDR	3	LIEPHVQASNSC(UniMod:4)WEEAISQVDR3	2678.76		5273.51
P82458	P82458	TRI18_RAT	Mid1	E3 ubiquitin-protein ligase Midline-1	1	LIEPIPDSHIR	LIEPIPDSHIR	3	LIEPIPDSHIR3	12391.9	9809.53	5670.54
O88902	O88902	PTN23_RAT	Ptpn23	Tyrosine-protein phosphatase non-receptor type 23 (Fragment)	1	LIEQDPYEHPER	LIEQDPYEHPER	3	LIEQDPYEHPER3	16173.6	21611	9139.46
A0A8I5ZVY6	A0A8I5ZVY6	A0A8I5ZVY6_RAT	Rint1	RAD50 interactor 1	1	LIEQMTESK	LIEQMTESK	2	LIEQMTESK2	23628.4	26298.4	17710.6
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	LIEQTAEYACTR	LIEQTAEYAC(UniMod:4)TR	2	LIEQTAEYAC(UniMod:4)TR2	23284.1	21599.1	19624.4
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	LIESSLGSVATK	LIESSLGSVATK	2	LIESSLGSVATK2	12239.9	11841.1	9545.97
P60203	P60203	MYPR_RAT	Plp1	Myelin proteolipid protein	1	LIETYFSK	LIETYFSK	2	LIETYFSK2	439778	427733	457798
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	LIEVAEMHGELIEFNER	LIEVAEMHGELIEFNER	3	LIEVAEMHGELIEFNER3	10608	8981.54	12630.3
P62755	P62755	RS6_RAT	Rps6	Small ribosomal subunit protein eS6	1	LIEVDDER	LIEVDDER	2	LIEVDDER2	89216.9	82700.7	62044.2
P62755	P62755	RS6_RAT	Rps6	Small ribosomal subunit protein eS6	1	LIEVDDERK	LIEVDDERK	2	LIEVDDERK2	3876.37	3078.03	3117.18
Q9QUR2	Q9QUR2	DCTN4_RAT	Dctn4	Dynactin subunit 4	1	LIEYYQQLAQK	LIEYYQQLAQK	2	LIEYYQQLAQK2	48811.2	55576.5	56163.9
Q9QUR2	Q9QUR2	DCTN4_RAT	Dctn4	Dynactin subunit 4	1	LIEYYQQLAQK	LIEYYQQLAQK	3	LIEYYQQLAQK3	2400.47	2938.03	
P38652	P38652	PGM1_RAT	Pgm1	Phosphoglucomutase-1	1	LIFADGSR	LIFADGSR	2	LIFADGSR2	21631.1	17115	
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	LIFDGNEETLK	LIFDGNEETLK	2	LIFDGNEETLK2	24752.1	22959.5	28184.7
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	LIFDGNEETLKK	LIFDGNEETLKK	3	LIFDGNEETLKK3	85999.8	80380.1	114598
P06685	P54708;P09626;Q64541;P06687;P06685;P06686	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	0	LIFDNLK	LIFDNLK	2	LIFDNLK2	121370	98692.3	93643.2
P06685	P54708;P09626;Q64541;P06687;P06685;P06686	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	0	LIFDNLKK	LIFDNLKK	2	LIFDNLKK2	53603.1	36845.9	28109.1
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	LIFHLVK	LIFHLVK	2	LIFHLVK2	10308.6	11304.6	7588.51
Q4KM31	Q4KM31	LIMD2_RAT	Limd2	LIM domain-containing protein 2	1	LIFHNSCFCCK	LIFHNSC(UniMod:4)FC(UniMod:4)C(UniMod:4)K	3	LIFHNSC(UniMod:4)FC(UniMod:4)C(UniMod:4)K3	5709.11	8684.04	12095.8
M0R8A3	M0R8A3	M0R8A3_RAT	Gp6	Glycoprotein 6 (platelet)	1	LIFIDQDFLFIPIMEINNAGR	LIFIDQDFLFIPIMEINNAGR	3	LIFIDQDFLFIPIMEINNAGR3		10906.5	10341.1
Q6AYT7	Q6AYT7	ABD12_RAT	Abhd12	Lysophosphatidylserine lipase ABHD12	1	LIFLNFVR	LIFLNFVR	2	LIFLNFVR2	17995.4	34453.7	34571.6
D4A5Z0	A0A8I6AML2;D4A5Z0	D4A5Z0_RAT	Csgalnact2	Hexosyltransferase	0	LIFNENDFIEGYYR	LIFNENDFIEGYYR	2	LIFNENDFIEGYYR2	1096.98		3008.1
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	LIFPEFER	LIFPEFER	2	LIFPEFER2	560642	591727	594451
O08623	O08623	SQSTM_RAT	Sqstm1	Sequestosome-1	1	LIFPNPFGHLSDSFSHSR	LIFPNPFGHLSDSFSHSR	3	LIFPNPFGHLSDSFSHSR3	27274.5	20099.4	31763.6
O08623	O08623	SQSTM_RAT	Sqstm1	Sequestosome-1	1	LIFPNPFGHLSDSFSHSR	LIFPNPFGHLSDSFSHSR	4	LIFPNPFGHLSDSFSHSR4	56535.4	63077.3	43068.7
A0A8I6AM38	A0A8I6AM38;D3ZCS4;G3V7Q7	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	0	LIFQMPQNK	LIFQMPQNK	2	LIFQMPQNK2	199629	229480	226500
Q63450	Q63450	KCC1A_RAT	Camk1	Calcium/calmodulin-dependent protein kinase type 1	1	LIFQVLDAVK	LIFQVLDAVK	2	LIFQVLDAVK2	24259.9	19893.1	18349.9
A0A8I6AVP7	A0A8I6AVP7	A0A8I6AVP7_RAT	Odr4	Protein odr-4 homolog	1	LIFSMEK	LIFSMEK	2	LIFSMEK2		4097.98	7131.58
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	LIFSTITSK	LIFSTITSK	2	LIFSTITSK2	138151	121648	152810
D3Z8X6	D3Z8X6	D3Z8X6_RAT	Dtx3l	E3 ubiquitin-protein ligase	1	LIFTVGESR	LIFTVGESR	2	LIFTVGESR2	9274.79	20271	8123.74
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	LIFYDLR	LIFYDLR	2	LIFYDLR2	76131.7	54082.2	64707.7
P06761	P06761;P0DMW0;P0DMW1;P55063;P14659;P63018;M0RCB1	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	0	LIGDAAK	LIGDAAK	1	LIGDAAK1	56100.3	38409	44732.6
A0A0G2K4B1;A0A8I6GCA6;D3Z8G6;D3ZTT6	A0A0G2K4B1;D3ZTT6;D3Z8G6;A0A8I6GCA6	A0A0G2K4B1_RAT;A0A8I6GCA6_RAT;D3Z8G6_RAT;D3ZTT6_RAT	Olr623;Or4p20;Or4p22d;Or4p22e	Olfactory receptor	0	LIGDLLVR	LIGDLLVR	2	LIGDLLVR2	157899	205458	128369
O35815	O35815	ATX3_RAT	Atxn3	Ataxin-3	1	LIGEELAHLK	LIGEELAHLK	2	LIGEELAHLK2	4607.04		
Q68FW4	Q68FW4	STX18_RAT	Stx18	Syntaxin-18	1	LIGEMNSLFDEVR	LIGEMNSLFDEVR	2	LIGEMNSLFDEVR2	5894.29	8557.66	9783.63
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	LIGEQTIHCTSDSR	LIGEQTIHC(UniMod:4)TSDSR	2	LIGEQTIHC(UniMod:4)TSDSR2	4163.7	3732.17	1288
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	LIGEQTIHCTSDSR	LIGEQTIHC(UniMod:4)TSDSR	3	LIGEQTIHC(UniMod:4)TSDSR3	146055	141420	119462
P29314	M0RB65;D3ZV50;A0A8I5ZK66;P29314	RS9_RAT	Rps9	Small ribosomal subunit protein uS4	0	LIGEYGLR	LIGEYGLR	2	LIGEYGLR2	140087	154395	154621
P51794	P51794	CLCN4_RAT	Clcn4	H(+)/Cl(-) exchange transporter 4	1	LIGFAQR	LIGFAQR	2	LIGFAQR2	80726	81954.6	80947.7
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	LIGGWEDNPFK	LIGGWEDNPFK	2	LIGGWEDNPFK2	107145	106782	127396
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	LIGGWEDNPFKGELQIVLR	LIGGWEDNPFKGELQIVLR	3	LIGGWEDNPFKGELQIVLR3	6447.41	6028.48	4619.46
A0A8I5ZSB0	A0A8I5ZSB0	A0A8I5ZSB0_RAT	Igtp	Interferon gamma induced GTPase	1	LIGHEEEDSAPTGVVR	LIGHEEEDSAPTGVVR	2	LIGHEEEDSAPTGVVR2	1633.71		2046.21
A0A8I5ZSB0	A0A8I5ZSB0	A0A8I5ZSB0_RAT	Igtp	Interferon gamma induced GTPase	1	LIGHEEEDSAPTGVVR	LIGHEEEDSAPTGVVR	3	LIGHEEEDSAPTGVVR3	28398.7	32814	36710.7
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	LIGISLPK	LIGISLPK	2	LIGISLPK2	1.26202e+06	1.16153e+06	1.1795e+06
B1WBX5	B1WBX5	B1WBX5_RAT	Slc43a1	Solute carrier family 43 member 1	1	LIGLALDHK	LIGLALDHK	2	LIGLALDHK2	6613.3	6230.07	
Q5FVN0	Q5FVN0	MBOA5_RAT	Lpcat3	Lysophospholipid acyltransferase 5	1	LIGLSIDYYDGGK	LIGLSIDYYDGGK	2	LIGLSIDYYDGGK2	7513.99	7957.96	4654.37
Q5FVN0	Q5FVN0	MBOA5_RAT	Lpcat3	Lysophospholipid acyltransferase 5	1	LIGLSIDYYDGGKDR	LIGLSIDYYDGGKDR	3	LIGLSIDYYDGGKDR3	36556.1	36049.1	21547.1
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	LIGNLSEK	LIGNLSEK	2	LIGNLSEK2	296494	298546	275001
B2GV73	B2GV73	B2GV73_RAT	Arpc3	Actin-related protein 2/3 complex subunit 3	1	LIGNMALLPIR	LIGNMALLPIR	2	LIGNMALLPIR2	686566	853068	759636
P13086	P13086	SUCA_RAT	Suclg1	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial	1	LIGPNCPGIINPGECK	LIGPNC(UniMod:4)PGIINPGEC(UniMod:4)K	2	LIGPNC(UniMod:4)PGIINPGEC(UniMod:4)K2	200939	207471	227804
P13086	P13086	SUCA_RAT	Suclg1	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial	1	LIGPNCPGIINPGECK	LIGPNC(UniMod:4)PGIINPGEC(UniMod:4)K	3	LIGPNC(UniMod:4)PGIINPGEC(UniMod:4)K3	30515.9	34891.6	27730.3
P68370;Q68FR8	P68370;Q68FR8	TBA1A_RAT;TBA3_RAT	Tuba1a;Tuba3b	Tubulin alpha-1A chain	0	LIGQIVSSITASLR	LIGQIVSSITASLR	2	LIGQIVSSITASLR2	930570	679905	649950
P68370;Q68FR8	P68370;Q68FR8	TBA1A_RAT;TBA3_RAT	Tuba1a;Tuba3b	Tubulin alpha-1A chain	0	LIGQIVSSITASLR	LIGQIVSSITASLR	3	LIGQIVSSITASLR3	365392	462720	424051
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	LIGQLNLK	LIGQLNLK	2	LIGQLNLK2	404741	433580	371258
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	LIGQVHEVSSVPELLNMSR	LIGQVHEVSSVPELLNMSR	3	LIGQVHEVSSVPELLNMSR3	26565.2	27319.2	29164.2
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	LIGSAEELIR	LIGSAEELIR	2	LIGSAEELIR2	230854	201002	204287
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	LIGSHTISK	LIGSHTISK	2	LIGSHTISK2	41708.5	15802	16722.4
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	LIGSVDDLLPSLPASSR	LIGSVDDLLPSLPASSR	2	LIGSVDDLLPSLPASSR2	60240.8	49235.3	36812.7
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	LIGSVDDLLPSLPASSR	LIGSVDDLLPSLPASSR	3	LIGSVDDLLPSLPASSR3	26146.1	23521	39916.9
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	LIGTNCIIYPVNSK	LIGTNC(UniMod:4)IIYPVNSK	2	LIGTNC(UniMod:4)IIYPVNSK2	325710	317577	304978
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	LIGTNCIIYPVNSK	LIGTNC(UniMod:4)IIYPVNSK	3	LIGTNC(UniMod:4)IIYPVNSK3	32271.3	36103.3	40398.6
P09760	P09760	FER_RAT	Fer	Tyrosine-protein kinase Fer	1	LIGVCTQR	LIGVC(UniMod:4)TQR	2	LIGVC(UniMod:4)TQR2	33470.8	44311.1	
P81795	C9WPN6;P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	0	LIGWGQIR	LIGWGQIR	2	LIGWGQIR2	463741	496584	446400
F1M9Q3	F1M9Q3	F1M9Q3_RAT	Ltn1	E3 ubiquitin-protein ligase listerin	1	LIGWLNDSQK	LIGWLNDSQK	2	LIGWLNDSQK2	7333.34	9217.21	14393.7
Q5PPL3	Q5PPL3	NSDHL_RAT	Nsdhl	Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating	1	LIGYRPLVTMDDAVER	LIGYRPLVTMDDAVER	3	LIGYRPLVTMDDAVER3	95314.8	81033.7	91339.5
Q5XIR9	Q5XIR9	UBAC1_RAT	Ubac1	Ubiquitin-associated domain-containing protein 1	1	LIHAASER	LIHAASER	2	LIHAASER2	7379.97		8851.45
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	LIHDGCLLWK	LIHDGC(UniMod:4)LLWK	2	LIHDGC(UniMod:4)LLWK2	34493.6	34834	28710.1
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	LIHDGCLLWK	LIHDGC(UniMod:4)LLWK	3	LIHDGC(UniMod:4)LLWK3	155267	196822	171280
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	LIHEDGIIRPYDR	LIHEDGIIRPYDR	3	LIHEDGIIRPYDR3	18490.8	13005	23113.7
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	LIHEDGIIRPYDR	LIHEDGIIRPYDR	4	LIHEDGIIRPYDR4	26832	22397.9	20495.9
A0A8I5ZS17	A0A8I5ZS17	A0A8I5ZS17_RAT	Snx25	Sorting nexin 25	1	LIHEEEEETPDSQLASGK	LIHEEEEETPDSQLASGK	3	LIHEEEEETPDSQLASGK3	8087.92	11204.5	
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	LIHEGGAHIYVCGDAR	LIHEGGAHIYVC(UniMod:4)GDAR	3	LIHEGGAHIYVC(UniMod:4)GDAR3		3347.8	2190.06
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	LIHEGGAHIYVCGDAR	LIHEGGAHIYVC(UniMod:4)GDAR	4	LIHEGGAHIYVC(UniMod:4)GDAR4	23171.9	20213.3	35612.1
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	LIHENQGQCCGLIDLVR	LIHENQGQC(UniMod:4)C(UniMod:4)GLIDLVR	3	LIHENQGQC(UniMod:4)C(UniMod:4)GLIDLVR3	1366.73	1230.5	
Q6AYB4	Q6AYB4	HSP7E_RAT	Hspa14	Heat shock 70 kDa protein 14	1	LIHEPSAALLAYGIGQDCPTGK	LIHEPSAALLAYGIGQDC(UniMod:4)PTGK	3	LIHEPSAALLAYGIGQDC(UniMod:4)PTGK3	1433.62	3691.91	1667.29
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	LIHFSGVALGEACTIVLR	LIHFSGVALGEAC(UniMod:4)TIVLR	3	LIHFSGVALGEAC(UniMod:4)TIVLR3	18284.3	23808.2	18279.5
A0A0G2K7E7;A0A8J8XD56	A0A0G2K7E7;A0A8J8XD56	A0A0G2K7E7_RAT;A0A8J8XD56_RAT	LOC108348617;Sec61g	Protein transport protein Sec61 subunit gamma	0	LIHIPINNIIVGG	LIHIPINNIIVGG	2	LIHIPINNIIVGG2	6192.88	6582.74	4187.41
P86182	P86182	CCD22_RAT	Ccdc22	Coiled-coil domain-containing protein 22	1	LIHLASQWEK	LIHLASQWEK	2	LIHLASQWEK2	5163.89		9114.17
P86182	P86182	CCD22_RAT	Ccdc22	Coiled-coil domain-containing protein 22	1	LIHLASQWEK	LIHLASQWEK	3	LIHLASQWEK3	15992.5	11287.6	4420.83
Q01986	Q01986	MP2K1_RAT	Map2k1	Dual specificity mitogen-activated protein kinase kinase 1	1	LIHLEIKPAIR	LIHLEIKPAIR	3	LIHLEIKPAIR3	45476.7	46908.5	28265.9
P36506	P36506	MP2K2_RAT	Map2k2	Dual specificity mitogen-activated protein kinase kinase 2	1	LIHLEIKPAVR	LIHLEIKPAVR	3	LIHLEIKPAVR3	11223.5	3475.78	
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LIHLFGAVLAGGK	LIHLFGAVLAGGK	2	LIHLFGAVLAGGK2	6014.81	2272.88	
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LIHLFGAVLAGGK	LIHLFGAVLAGGK	3	LIHLFGAVLAGGK3	43017.2	40531.3	30401.2
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	LIHLLSQK	LIHLLSQK	2	LIHLLSQK2	4935.04	3648.92	
A0A8I6B124	A0A8I6B124	A0A8I6B124_RAT	Zswim8	Zinc finger, SWIM-type containing 8	1	LIHLTPADYDDFVNAIR	LIHLTPADYDDFVNAIR	3	LIHLTPADYDDFVNAIR3		1729.59	5445.62
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	LIHNSQDPSYFACLIK	LIHNSQDPSYFAC(UniMod:4)LIK	2	LIHNSQDPSYFAC(UniMod:4)LIK2	1681.41	2614.58	2184.27
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	LIHNSQDPSYFACLIK	LIHNSQDPSYFAC(UniMod:4)LIK	3	LIHNSQDPSYFAC(UniMod:4)LIK3	12642.9	15063.9	12605.4
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	LIHQLLTDIGR	LIHQLLTDIGR	2	LIHQLLTDIGR2	16614.7	12680.2	7774.79
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	LIHQLLTDIGR	LIHQLLTDIGR	3	LIHQLLTDIGR3	19885.3	22462.1	20979.7
G3V8G1	G3V8G1	G3V8G1_RAT	Agtpbp1	tubulin-glutamate carboxypeptidase	1	LIHQNDIIDR	LIHQNDIIDR	3	LIHQNDIIDR3	15422	7578.41	6464.06
Q6NX65	Q6NX65	PDC10_RAT	Pdcd10	Programmed cell death protein 10	1	LIHQTNLILQTFK	LIHQTNLILQTFK	2	LIHQTNLILQTFK2	42269.6	37652	34798
Q6NX65	Q6NX65	PDC10_RAT	Pdcd10	Programmed cell death protein 10	1	LIHQTNLILQTFK	LIHQTNLILQTFK	3	LIHQTNLILQTFK3	507706	568679	578720
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	LIIAGTSAYAR	LIIAGTSAYAR	2	LIIAGTSAYAR2	62164.7	52585.6	76692.3
A0A8I5ZKU9	A0A8I5ZKU9	A0A8I5ZKU9_RAT	Shmt1	Serine hydroxymethyltransferase	1	LIIAGTSCYSR	LIIAGTSC(UniMod:4)YSR	2	LIIAGTSC(UniMod:4)YSR2	5996.29	16172.1	5425.97
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	LIIDKLPTQLAWEALEQR	LIIDKLPTQLAWEALEQR	3	LIIDKLPTQLAWEALEQR3	171062	136040	163431
Q8CHI9	Q8CHI9	CHSTF_RAT	Chst15	Carbohydrate sulfotransferase 15	1	LIIDSIAAR	LIIDSIAAR	2	LIIDSIAAR2	50459.8	59124.4	54504.1
A0A0G2K2M3	A0A0G2K2M3	A0A0G2K2M3_RAT	Stat6	Signal transducer and activator of transcription	1	LIIGFISK	LIIGFISK	2	LIIGFISK2	9033.88	6276.44	4685.11
P97535	P97535	PLA1A_RAT	Pla1a	Phospholipase A1 member A	1	LIIHGFR	LIIHGFR	2	LIIHGFR2	39014.9	31379.1	21200.2
Q5PQM0	Q5PQM0	TM168_RAT	Tmem168	Transmembrane protein 168	1	LIIILDSENSTPWVK	LIIILDSENSTPWVK	2	LIIILDSENSTPWVK2	3601.17	1394.19	3844.64
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	LIILAVNR	LIILAVNR	2	LIILAVNR2	19721.7	19847.1	25220.5
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	LIINELSNVMEANAAR	LIINELSNVMEANAAR	2	LIINELSNVMEANAAR2	37970	38878.9	31066
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	LIINELSNVMEANAAR	LIINELSNVMEANAAR	3	LIINELSNVMEANAAR3	31782.2	27000.6	35649.2
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	LIINSLYK	LIINSLYK	1	LIINSLYK1	14894.6	12587.1	12878
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	LIINSLYK	LIINSLYK	2	LIINSLYK2	3.30103e+06	3.78603e+06	3.41819e+06
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	LIIPIYEK	LIIPIYEK	2	LIIPIYEK2	30509.4	28211.4	36645.3
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	LIISMTLHDR	LIISMTLHDR	2	LIISMTLHDR2	9438.88	5150.14	3334.36
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	LIISMTLHDR	LIISMTLHDR	3	LIISMTLHDR3	14748.8	24431.4	17333.2
Q68FT7	Q68FT7	Q68FT7_RAT	Farsb	Phenylalanine--tRNA ligase beta subunit	1	LIITEETAK	LIITEETAK	2	LIITEETAK2	33682.1	29819.7	31502.3
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	LIITSAEASPAECCQHAK	LIITSAEASPAEC(UniMod:4)C(UniMod:4)QHAK	3	LIITSAEASPAEC(UniMod:4)C(UniMod:4)QHAK3	102229	96699	93230.9
P06685	P54708;Q64541;P06687;P06685;P06686	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	0	LIIVEGCQR	LIIVEGC(UniMod:4)QR	2	LIIVEGC(UniMod:4)QR2	183039	178946	229397
P54313	P54311;O35353;A0A8I6A9K0;P54313	GBB2_RAT	Gnb2	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2	0	LIIWDSYTTNK	LIIWDSYTTNK	2	LIIWDSYTTNK2	690182	1.43544e+06	1.07923e+06
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	LIIWGVLEMEDK	LIIWGVLEMEDK	2	LIIWGVLEMEDK2	24749.7	31546.1	24806.8
D3ZZJ7	D3ZZJ7	D3ZZJ7_RAT	Dcp1b	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	LIKPVPVRPSSSQR	LIKPVPVRPSSSQR	4	LIKPVPVRPSSSQR4	27987.7	38695.9	24279.4
D3ZY86	D3ZY86	D3ZY86_RAT	Tango2	Transport and golgi organization 2 homolog	1	LILAANR	LILAANR	2	LILAANR2	86935.4	56087.7	71791.4
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	LILADALCYAHTFNPK	LILADALC(UniMod:4)YAHTFNPK	3	LILADALC(UniMod:4)YAHTFNPK3	43620.9	46922.8	54985.8
A0A8I5ZTB8	A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	LILAGALR	LILAGALR	2	LILAGALR2	36572.3	32070.4	24204
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	LILDCAR	LILDC(UniMod:4)AR	2	LILDC(UniMod:4)AR2	193750	158896	162307
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LILDIQNK	LILDIQNK	1	LILDIQNK1	7556.84	6194.68	4145.94
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LILDIQNK	LILDIQNK	2	LILDIQNK2	3.86742e+06	4.14278e+06	3.82649e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LILDIQNKK	LILDIQNKK	2	LILDIQNKK2	140161	142179	150346
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	LILDVFCGSQMHFVR	LILDVFC(UniMod:4)GSQMHFVR	2	LILDVFC(UniMod:4)GSQMHFVR2	5759.55	6286.44	5489.91
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	LILDVFCGSQMHFVR	LILDVFC(UniMod:4)GSQMHFVR	3	LILDVFC(UniMod:4)GSQMHFVR3	97241.8	73980.6	93608
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	LILEFFSSR	LILEFFSSR	2	LILEFFSSR2		7432.35	5885.61
Q8CJ99	Q8CJ99	SCLT1_RAT	Sclt1	Sodium channel and clathrin linker 1	1	LILEHQEK	LILEHQEK	2	LILEHQEK2		32452.3	28213.1
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	LILENLKPHLLAALK	LILENLKPHLLAALK	4	LILENLKPHLLAALK4	2506.68		
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	LILEQMQK	LILEQMQK	2	LILEQMQK2	119771	103617	116905
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	LILEQMQKDPQALSEHLK	LILEQMQKDPQALSEHLK	4	LILEQMQKDPQALSEHLK4		2074.66	7577.64
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LILEVHQFSR	LILEVHQFSR	2	LILEVHQFSR2	77392.8	80547.9	51129
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LILEVHQFSR	LILEVHQFSR	3	LILEVHQFSR3	958767	1.07162e+06	960391
A0A8I5YBR2	A0A8I5YBR2	A0A8I5YBR2_RAT	Cops6	COP9 signalosome complex subunit 6	1	LILEYVK	LILEYVK	2	LILEYVK2	260261	236211	237373
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	LILFLNK	LILFLNK	2	LILFLNK2	34629.6	45534.6	30873.7
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	LILFSTK	LILFSTK	1	LILFSTK1	8951.31	2352.74	841.203
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	LILFSTK	LILFSTK	2	LILFSTK2	962500	790579	849446
A0A096MK24	A0A096MK24	A0A096MK24_RAT	Morc4	Microrchidia 4	1	LILGEEPAEK	LILGEEPAEK	2	LILGEEPAEK2	15627.7	9843.81	
O35547	O35547	ACSL4_RAT	Acsl4	Long-chain-fatty-acid--CoA ligase 4	1	LILGNYK	LILGNYK	2	LILGNYK2	25266.4	20363.5	22104.2
P62278	P62278;M0RCY2	RS13_RAT	Rps13	Small ribosomal subunit protein uS15	0	LILIESR	LILIESR	2	LILIESR2	74709.4	79869	64045.6
Q63921	P35355;Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	0	LILIGETIK	LILIGETIK	2	LILIGETIK2	21319.9	11755.3	19366
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	LILLLCGR	LILLLC(UniMod:4)GR	2	LILLLC(UniMod:4)GR2	74026.6	96859.4	86220.1
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	LILPELGPVFK	LILPELGPVFK	2	LILPELGPVFK2	32111.2	41546.5	42797.6
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	LILPHVDVQLK	LILPHVDVQLK	2	LILPHVDVQLK2	29019	17729.3	12075
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	LILPHVDVQLK	LILPHVDVQLK	3	LILPHVDVQLK3	591084	524295	478065
P22062	P22062	PIMT_RAT	Pcmt1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase	1	LILPVGPAGGNQMLEQYDK	LILPVGPAGGNQMLEQYDK	3	LILPVGPAGGNQMLEQYDK3	25705	35868.9	31892.3
P22062	P22062	PIMT_RAT	Pcmt1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase	1	LILPVGPAGGNQMLEQYDKLQDGSVK	LILPVGPAGGNQMLEQYDKLQDGSVK	3	LILPVGPAGGNQMLEQYDKLQDGSVK3	21981.4	16549.1	19988.1
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	LILPYSLSEAITAR	LILPYSLSEAITAR	2	LILPYSLSEAITAR2	16678.3	29081.8	13811.7
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	LILPYSLSEAITAR	LILPYSLSEAITAR	3	LILPYSLSEAITAR3	3603.22	3090.32	3372.33
P41562	P41562	IDHC_RAT	Idh1	Isocitrate dehydrogenase [NADP] cytoplasmic	1	LILPYVELDLHSYDLGIENR	LILPYVELDLHSYDLGIENR	3	LILPYVELDLHSYDLGIENR3	9270.88		5061.74
Q66H63	Q66H63	GDAP2_RAT	Gdap2	Ganglioside-induced differentiation-associated-protein 2	1	LILQGQLSEAALQK	LILQGQLSEAALQK	2	LILQGQLSEAALQK2	9469.8	13227.8	9350.82
Q66H63	Q66H63	GDAP2_RAT	Gdap2	Ganglioside-induced differentiation-associated-protein 2	1	LILQGQLSEAALQK	LILQGQLSEAALQK	3	LILQGQLSEAALQK3	3635.02	4456.11	
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	LILQLPK	LILQLPK	1	LILQLPK1	25344.7	17370.7	24029.3
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	LILQLPK	LILQLPK	2	LILQLPK2	4.16646e+06	4.41913e+06	4.37278e+06
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	LILQMPR	LILQMPR	2	LILQMPR2	28224.8	31933.2	32082.9
O08561	O08561	PI4KB_RAT	Pi4kb	Phosphatidylinositol 4-kinase beta	1	LILSDELKPAHR	LILSDELKPAHR	3	LILSDELKPAHR3	13559.2	8203.07	5507.92
B1WBY5	B1WBY5	B1WBY5_RAT	Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	1	LILTEASK	LILTEASK	2	LILTEASK2	52329	61777	49038.7
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	LILVDYILFK	LILVDYILFK	2	LILVDYILFK2	25605	47924.6	31814.3
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	LILVDYILFK	LILVDYILFK	3	LILVDYILFK3	2132.4		2247.53
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	LILVDYILFKGK	LILVDYILFKGK	3	LILVDYILFKGK3	14038.1	4605.66	7429.79
Q9QZG1	Q9QZG1	S22AN_RAT	Slc22a23	Solute carrier family 22 member 23	1	LILYLTQK	LILYLTQK	2	LILYLTQK2	31462.7	25590.1	40513.6
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	LILYQSAVESAR	LILYQSAVESAR	2	LILYQSAVESAR2	43676.4	35677.5	54855.6
Q9Z2Q4	Q9Z2Q4	METH_RAT	Mtr	Methionine synthase	1	LIMAGNYEEALSVAK	LIMAGNYEEALSVAK	2	LIMAGNYEEALSVAK2	1956.94		
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	LIMDSLHIAAQEQR	LIMDSLHIAAQEQR	3	LIMDSLHIAAQEQR3	34902.9	27261.6	28225.6
A0A8I6AM23	A0A8I6AM23	A0A8I6AM23_RAT	Jak1	Tyrosine-protein kinase	1	LIMEFLPSGSLK	LIMEFLPSGSLK	2	LIMEFLPSGSLK2		4891.99	8592.5
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	LIMEYLPYGSLR	LIMEYLPYGSLR	2	LIMEYLPYGSLR2	102361	113631	129494
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	LIMEYLPYGSLR	LIMEYLPYGSLR	3	LIMEYLPYGSLR3	13883.4	8392.33	15918.2
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	LIMGIGHR	LIMGIGHR	2	LIMGIGHR2	15118.5	9267.91	15535
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	LIMLFPQK	LIMLFPQK	2	LIMLFPQK2	6846.2	8548.12	6735.86
Q6YDN8	Q6YDN8	Q6YDN8_RAT	Gid8	GID complex subunit 8 homolog	1	LIMNYLVTEGFK	LIMNYLVTEGFK	2	LIMNYLVTEGFK2			11692.8
B1WBN7	B1WBN7	B1WBN7_RAT	Fam20c	FAM20C	1	LIMTFQNYGQALFK	LIMTFQNYGQALFK	2	LIMTFQNYGQALFK2	3221.26	6224.56	5262.91
B1WBN7	B1WBN7	B1WBN7_RAT	Fam20c	FAM20C	1	LIMTFQNYGQALFKPMK	LIMTFQNYGQALFKPMK	3	LIMTFQNYGQALFKPMK3	94285	86166.8	90645.7
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	LINAIELK	LINAIELK	2	LINAIELK2	61300.9	63085.9	75105.6
Q4V8E2	Q4V8E2	Q4V8E2_RAT	Psmd14	Proteasome 26S subunit, non-ATPase 14	1	LINANMMVLGHEPR	LINANMMVLGHEPR	2	LINANMMVLGHEPR2	3797.26	2269.25	3866.3
Q4V8E2	Q4V8E2	Q4V8E2_RAT	Psmd14	Proteasome 26S subunit, non-ATPase 14	1	LINANMMVLGHEPR	LINANMMVLGHEPR	3	LINANMMVLGHEPR3	86425.6	82890.8	90111.8
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	LINDYVSK	LINDYVSK	1	LINDYVSK1	6154.61	5256.59	6973.03
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	LINDYVSK	LINDYVSK	2	LINDYVSK2	964751	909261	932046
P05544	P05544	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	1	LINDYVSNQTQGK	LINDYVSNQTQGK	2	LINDYVSNQTQGK2	5106.31	4873.63	6761.94
O70196	O70196	PPCE_RAT	Prep	Prolyl endopeptidase	1	LINIDFTDPDESK	LINIDFTDPDESK	2	LINIDFTDPDESK2	8040.18	7492.55	9440.08
Q6P7R8	Q6P7R8	DHB12_RAT	Hsd17b12	Very-long-chain 3-oxoacyl-CoA reductase	1	LININVLSICK	LININVLSIC(UniMod:4)K	2	LININVLSIC(UniMod:4)K2	66011.9	46872.2	50555.5
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	LINLLQER	LINLLQER	2	LINLLQER2	328903	311804	324352
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	LINLVGESLR	LINLVGESLR	2	LINLVGESLR2	198923	187065	188854
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	LINMTYCPK	LINMTYC(UniMod:4)PK	2	LINMTYC(UniMod:4)PK2	15583.3	17416.5	18601.8
P18484	P18484;A0A8I6A4J2	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	0	LINNAIK	LINNAIK	2	LINNAIK2	127667	120693	94501.4
B5DEP5	B5DEP5	B5DEP5_RAT	Trip4	Thyroid hormone receptor interactor 4	1	LINNCLVCGR	LINNC(UniMod:4)LVC(UniMod:4)GR	2	LINNC(UniMod:4)LVC(UniMod:4)GR2	19558.8	16721	20240.2
Q5RJZ6	Q5RJZ6	SCOC_RAT	Scoc	Short coiled-coil protein	1	LINQVLELQHTLEDLSAR	LINQVLELQHTLEDLSAR	3	LINQVLELQHTLEDLSAR3	90043.6	163392	48297.6
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	LINQVNAIK	LINQVNAIK	2	LINQVNAIK2	37934.6	35837.6	43488.9
P85845	P85845	FSCN1_RAT	Fscn1	Fascin	1	LINRPIIVFR	LINRPIIVFR	3	LINRPIIVFR3	16463.9	9284.1	
A0A8I5ZS17	A0A8I5ZS17	A0A8I5ZS17_RAT	Snx25	Sorting nexin 25	1	LINSNSDVEFLK	LINSNSDVEFLK	2	LINSNSDVEFLK2	6512.77	5110.67	1687.52
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	LINSSDDLQDNSR	LINSSDDLQDNSR	2	LINSSDDLQDNSR2	11755	15581.4	13269.7
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	LINTSYLSIHK	LINTSYLSIHK	2	LINTSYLSIHK2	26097.3	19056.6	22542.1
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	LINTSYLSIHK	LINTSYLSIHK	3	LINTSYLSIHK3	171564	149190	172877
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	LINTWVAENTNHK	LINTWVAENTNHK	2	LINTWVAENTNHK2	1.01898e+06	671469	585292
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	LINTWVAENTNHK	LINTWVAENTNHK	3	LINTWVAENTNHK3	40287.9	26539	21444
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	LINTWVAENTNHK	LINTWVAENTNHK	4	LINTWVAENTNHK4	10293.7	11681.3	9803.08
P63031	P63031	MPC1_RAT	Mpc1	Mitochondrial pyruvate carrier 1	1	LINYEMSK	LINYEMSK	2	LINYEMSK2	191828	163086	193280
P08461	A0A8I6B5J2;P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	0	LIPADNEK	LIPADNEK	2	LIPADNEK2	89741.1	72374.4	79020
A0A8I5ZQF6	A0A8I6G4V0;A0A8I5ZQF6;Q6PDV7;A0A8I5ZXK4	A0A8I5ZQF6_RAT	RGD1563861	Similar to ribosomal protein L10	0	LIPDGCGVK	LIPDGC(UniMod:4)GVK	2	LIPDGC(UniMod:4)GVK2	40945.4	50856.1	33282.8
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	LIPDGMSR	LIPDGMSR	2	LIPDGMSR2	28326.2	30515	26142.4
P49242	P49242	RS3A_RAT	Rps3a	Small ribosomal subunit protein eS1	1	LIPDSIGK	LIPDSIGK	2	LIPDSIGK2	66729.1	55270.2	52162.8
P49242	P49242	RS3A_RAT	Rps3a	Small ribosomal subunit protein eS1	1	LIPDSIGKDIEK	LIPDSIGKDIEK	3	LIPDSIGKDIEK3	24274.3	34206.9	45591.5
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	LIPEMDQIFTDVEMTTLEK	LIPEMDQIFTDVEMTTLEK	3	LIPEMDQIFTDVEMTTLEK3	63556.3	88190.8	77549
A0A0G2K089	A0A0G2K089	A0A0G2K089_RAT	Dennd4c	DENN domain containing 4C	1	LIPGCEVIQATPYGR	LIPGC(UniMod:4)EVIQATPYGR	2	LIPGC(UniMod:4)EVIQATPYGR2	21251.8	24354.4	12536.3
M0RCP2	M0RCP2	M0RCP2_RAT	Sh3pxd2b	SH3 and PX domains 2B	1	LIPIDEYCK	LIPIDEYC(UniMod:4)K	2	LIPIDEYC(UniMod:4)K2	21907.3	13180.5	
A0A8I6AGS4	A0A8I6AGS4	A0A8I6AGS4_RAT	Abi3bp	ABI family member 3 binding protein	1	LIPITIIK	LIPITIIK	2	LIPITIIK2	35767.7	48396.9	32020.6
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	LIPLLQEEDR	LIPLLQEEDR	2	LIPLLQEEDR2	162850	140784	159221
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	LIPLLQEEDRHQR	LIPLLQEEDRHQR	4	LIPLLQEEDRHQR4	16660	9092.44	21131.4
Q63433	Q63433	PKN1_RAT	Pkn1	Serine/threonine-protein kinase N1	1	LIPNAVATGSFSPNASPGSEIR	LIPNAVATGSFSPNASPGSEIR	3	LIPNAVATGSFSPNASPGSEIR3	6342.72	7039.22	7312.03
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	LIPPQDILR	LIPPQDILR	2	LIPPQDILR2	134018	127391	133111
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	LIPQAGTVMR	LIPQAGTVMR	2	LIPQAGTVMR2	38630.3	36033.6	34101.5
O35394	O35394	PRAF1_RAT	Rabac1	Prenylated Rab acceptor protein 1	1	LIPSGAGR	LIPSGAGR	2	LIPSGAGR2	53290	47623.6	53014.2
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	LIPTGAPGK	LIPTGAPGK	1	LIPTGAPGK1	9340.18		
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	LIPTGAPGK	LIPTGAPGK	2	LIPTGAPGK2	980899	1.06173e+06	960975
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	LIPTLVSIMQAPADK	LIPTLVSIMQAPADK	2	LIPTLVSIMQAPADK2	13379.9	14304.2	10362.8
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	LIPVITSNCTSK	LIPVITSNC(UniMod:4)TSK	2	LIPVITSNC(UniMod:4)TSK2	66056.9	53074.1	44588.7
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	LIPVLVNGMK	LIPVLVNGMK	2	LIPVLVNGMK2	131087	118152	129242
A0A8I6ACP7	A0A8I6ACP7	A0A8I6ACP7_RAT	Slc35b3	Solute carrier family 35 member B3	1	LIPVMLGGVFIQGK	LIPVMLGGVFIQGK	2	LIPVMLGGVFIQGK2	8230.74	9820.1	7191.53
A0A0G2QC19	A0A0G2QC19	A0A0G2QC19_RAT	Dnajc21	DnaJ heat shock protein family (Hsp40) member C21	1	LIQAAYDVLSDPQER	LIQAAYDVLSDPQER	2	LIQAAYDVLSDPQER2	6108.01	3658.75	6203.9
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	LIQAIDHNEGFSLI	LIQAIDHNEGFSLI	2	LIQAIDHNEGFSLI2	9609.51	5678.51	3326.58
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	LIQALALQGDVK	LIQALALQGDVK	2	LIQALALQGDVK2	4096.14	6626.36	2876.77
A0A0U1RRS5	A0A0U1RRS5	A0A0U1RRS5_RAT	Smg7	Nonsense-mediated mRNA decay factor	1	LIQCENEVGK	LIQC(UniMod:4)ENEVGK	2	LIQC(UniMod:4)ENEVGK2	6836.66	8277.61	9918.85
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	LIQDVWGIEGPIDAAFTR	LIQDVWGIEGPIDAAFTR	3	LIQDVWGIEGPIDAAFTR3	103711	146364	139718
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	LIQDVWGIEGPIDAAFTR	LIQDVWGIEGPIDAAFTR	4	LIQDVWGIEGPIDAAFTR4	18941.3	5965.27	2199.16
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	LIQDVWGIEGPIDAAFTRINCQGK	LIQDVWGIEGPIDAAFTRINC(UniMod:4)QGK	3	LIQDVWGIEGPIDAAFTRINC(UniMod:4)QGK3	81444	73951.1	94274.4
Q5XIS7	Q5XIS7	UBAP1_RAT	Ubap1	Ubiquitin-associated protein 1	1	LIQEAQQEAER	LIQEAQQEAER	2	LIQEAQQEAER2	2202.5	1186.58	2182.93
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	LIQEEKENTEQR	LIQEEKENTEQR	2	LIQEEKENTEQR2	2854.29	4969.57	5058.28
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	LIQEEKENTEQR	LIQEEKENTEQR	3	LIQEEKENTEQR3	36421.2	39578.4	40529.2
Q80WE1	Q80WE1	FMR1_RAT	Fmr1	Fragile X messenger ribonucleoprotein 1	1	LIQEIVDK	LIQEIVDK	2	LIQEIVDK2	20080.1	20447.7	12278
G3V9T7	G3V9T7	GET3_RAT	Get3	ATPase Get3	1	LIQELAK	LIQELAK	2	LIQELAK2	211668	178307	210543
Q91XJ1	Q91XJ1	BECN1_RAT	Becn1	Beclin-1	1	LIQELEDVEK	LIQELEDVEK	2	LIQELEDVEK2	19553.3	23111.8	14006.6
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	LIQEMTVTWEEK	LIQEMTVTWEEK	2	LIQEMTVTWEEK2	5462.96	5876.68	8720.79
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LIQEQHPEEELIK	LIQEQHPEEELIK	2	LIQEQHPEEELIK2	56156	38661.2	42159.4
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LIQEQHPEEELIK	LIQEQHPEEELIK	3	LIQEQHPEEELIK3	1.43005e+06	1.61914e+06	1.70981e+06
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	LIQGPLQGK	LIQGPLQGK	2	LIQGPLQGK2	4042.41	5928.34	6900.57
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	LIQHANVQSYSNLIR	LIQHANVQSYSNLIR	2	LIQHANVQSYSNLIR2	7063.65	5865.58	12008
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	LIQHANVQSYSNLIR	LIQHANVQSYSNLIR	3	LIQHANVQSYSNLIR3	78479.6	77341.7	87833
G3V8Y8	G3V8Y8	G3V8Y8_RAT	Hip1	Huntingtin interacting protein 1	1	LIQIPQLPENPPNFLR	LIQIPQLPENPPNFLR	3	LIQIPQLPENPPNFLR3		7053.3	
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	LIQLNQEK	LIQLNQEK	2	LIQLNQEK2	35415.8	36410	31086.1
Q6AYC2	Q6AYC2	IRGM_RAT	Irgm	Immunity-related GTPase family M protein	1	LIQNIQENIR	LIQNIQENIR	2	LIQNIQENIR2	14891.2	23400.3	15851.1
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LIQNNHYAMEDVATR	LIQNNHYAMEDVATR	2	LIQNNHYAMEDVATR2	4577.64	5785.77	8387.32
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LIQNNHYAMEDVATR	LIQNNHYAMEDVATR	3	LIQNNHYAMEDVATR3	336426	286871	281185
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LIQNNHYAMEDVATRR	LIQNNHYAMEDVATRR	3	LIQNNHYAMEDVATRR3	37641.9	54882.1	49279.9
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LIQNNHYAMEDVATRR	LIQNNHYAMEDVATRR	4	LIQNNHYAMEDVATRR4	78319.8	90717.1	81611.7
A1L1J9	A1L1J9	LMF2_RAT	Lmf2	Lipase maturation factor 2	1	LIQNQVANYPFR	LIQNQVANYPFR	2	LIQNQVANYPFR2	153307	172820	155331
A1L1J9	A1L1J9	LMF2_RAT	Lmf2	Lipase maturation factor 2	1	LIQNQVANYPFR	LIQNQVANYPFR	3	LIQNQVANYPFR3	10743.1	18128.1	10530.5
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	LIQNSPNLHDFHLK	LIQNSPNLHDFHLK	4	LIQNSPNLHDFHLK4	8311.82	15931.1	8901.1
A0A8I6GLQ4	A0A8I6GLQ4	A0A8I6GLQ4_RAT	Naip5	NLR family, apoptosis inhibitory protein 5	1	LIQNSPNLHDIHLK	LIQNSPNLHDIHLK	4	LIQNSPNLHDIHLK4	7406.74	9809.23	8104.01
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	LIQNVFEVK	LIQNVFEVK	2	LIQNVFEVK2	17700.2	17443.3	15204.8
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	LIQPDHPQISQQVAASLEK	LIQPDHPQISQQVAASLEK	3	LIQPDHPQISQQVAASLEK3	26464.2	36085.7	23953.2
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	LIQPMGMSPR	LIQPMGMSPR	2	LIQPMGMSPR2	79368.8	80538.8	69538.6
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	LIQPNQDGE	LIQPNQDGE	2	LIQPNQDGE2	9355.85	6069.68	12682.9
D3ZX21	D3ZX21	D3ZX21_RAT	Ap4e1	AP-4 complex subunit epsilon	1	LIQQELSSLK	LIQQELSSLK	2	LIQQELSSLK2	4929.36		5096.5
Q91XU8	Q91XU8	CDS2_RAT	Cds2	Phosphatidate cytidylyltransferase 2	1	LIQQFLTLRPDQQLHIFNTLK	LIQQFLTLRPDQQLHIFNTLK	3	LIQQFLTLRPDQQLHIFNTLK3	40300.4	41823.7	22452.8
Q91XU8	Q91XU8	CDS2_RAT	Cds2	Phosphatidate cytidylyltransferase 2	1	LIQQFLTLRPDQQLHIFNTLK	LIQQFLTLRPDQQLHIFNTLK	4	LIQQFLTLRPDQQLHIFNTLK4	117479	97277	73064.9
Q4FZX7	Q4FZX7	SRPRB_RAT	Srprb	Signal recognition particle receptor subunit beta	1	LIQQQLEK	LIQQQLEK	2	LIQQQLEK2	97324.4	72901	106582
O35346	O35346	FAK1_RAT	Ptk2	Focal adhesion kinase 1	1	LIQQTFR	LIQQTFR	2	LIQQTFR2		18766.4	13426.6
Q7TSN4	Q7TSN4	PIGW_RAT	Pigw	Phosphatidylinositol-glycan biosynthesis class W protein	1	LIQSATTNR	LIQSATTNR	2	LIQSATTNR2	12321.3	10305.2	12328.8
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LIQSHPESAEDLK	LIQSHPESAEDLK	2	LIQSHPESAEDLK2	1748.79	3961.03	1848.57
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LIQSHPESAEDLK	LIQSHPESAEDLK	3	LIQSHPESAEDLK3	90874.5	54341	102765
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LIQSHPESAEDLKEK	LIQSHPESAEDLKEK	2	LIQSHPESAEDLKEK2	6086.41	5333.52	4121.5
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LIQSHPESAEDLKEK	LIQSHPESAEDLKEK	3	LIQSHPESAEDLKEK3	256494	245139	213842
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LIQSHPESAEDLKEK	LIQSHPESAEDLKEK	4	LIQSHPESAEDLKEK4	383634	419343	407421
Q5RJK6	Q5RJK6	Q5RJK6_RAT	Inpp1	Inositol polyphosphate-1-phosphatase	1	LIQSLGPLK	LIQSLGPLK	2	LIQSLGPLK2	23163	20750.9	13552.1
A0A096MKE0	A0A096MKE0	A0A096MKE0_RAT	Asph	Aspartate-beta-hydroxylase	1	LIRDEGLMVMDK	LIRDEGLMVMDK	3	LIRDEGLMVMDK3	23467.8	15806.9	20239.8
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	LIRPYMEPILK	LIRPYMEPILK	3	LIRPYMEPILK3	13491.4	17240.1	20009.5
Q6QI44	Q6QI44	NAA25_RAT	Naa25	N-alpha-acetyltransferase 25, NatB auxiliary subunit	1	LISALPSLTHPVEPR	LISALPSLTHPVEPR	3	LISALPSLTHPVEPR3	3796.97	9494.67	7562.76
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	LISCIEEGSLETEGLLR	LISC(UniMod:4)IEEGSLETEGLLR	2	LISC(UniMod:4)IEEGSLETEGLLR2	3905.05	5097.34	6785.67
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	LISCIEEGSLETEGLLR	LISC(UniMod:4)IEEGSLETEGLLR	3	LISC(UniMod:4)IEEGSLETEGLLR3	4142.22	4380.97	
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	LISDFPEATSHK	LISDFPEATSHK	2	LISDFPEATSHK2	4.43606e+06	3.32802e+06	3.02944e+06
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	LISDFPEATSHK	LISDFPEATSHK	3	LISDFPEATSHK3	2.59555e+07	2.1949e+07	2.09619e+07
D3ZAP9	A0A8I6ALX9;D3ZAP9	D3ZAP9_RAT	Gpd1l1	Glycerol-3-phosphate dehydrogenase [NAD(+)]	0	LISDIIR	LISDIIR	2	LISDIIR2	49774.9	41750.1	43295.4
G3V6S0	Q9QWN8;G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	0	LISDINK	LISDINK	1	LISDINK1	5972.79	5113.35	1499.92
G3V6S0	Q9QWN8;G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	0	LISDINK	LISDINK	2	LISDINK2	1.86902e+06	2.04776e+06	2.0282e+06
F7F0H6	F7F0H6	F7F0H6_RAT	Ifgga2l1	Similar to interferon-inducible GTPase	1	LISDLPVYK	LISDLPVYK	2	LISDLPVYK2	26266.4	18346.4	46989.6
A0A8I6AVZ7	A0A8I6AVZ7	A0A8I6AVZ7_RAT	Mtcl1	Microtubule crosslinking factor 1	1	LISDTDGFIR	LISDTDGFIR	2	LISDTDGFIR2	7947.31	6145.93	5944.51
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	LISEEGVDSLTVK	LISEEGVDSLTVK	2	LISEEGVDSLTVK2	56926.8	47354.1	67232.9
P0C5E3	P0C5E3	PALLD_RAT	Palld	Palladin (Fragment)	1	LISEIEYR	LISEIEYR	2	LISEIEYR2	19922.7	17692.7	21922.8
O08561	O08561	PI4KB_RAT	Pi4kb	Phosphatidylinositol 4-kinase beta	1	LISELSLLNHK	LISELSLLNHK	3	LISELSLLNHK3	15645.8	9423.96	12517.8
A0A8J8YFS5	A0A8I6ALV4;A0A8J8YFS5	A0A8J8YFS5_RAT	Hars1	Histidine--tRNA ligase, cytoplasmic	0	LISELWDAGIK	LISELWDAGIK	2	LISELWDAGIK2	26821	31468.4	23246.7
A0A8I6AMK1	A0A8I6AMK1	A0A8I6AMK1_RAT	Kdsr	3-dehydrosphinganine reductase	1	LISETTAVCKPEQVAK	LISETTAVC(UniMod:4)KPEQVAK	3	LISETTAVC(UniMod:4)KPEQVAK3	24556.7	19616.4	37490
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	LISFSPTVNTSVSTMASAVAPTYAGDLR	LISFSPTVNTSVSTMASAVAPTYAGDLR	3	LISFSPTVNTSVSTMASAVAPTYAGDLR3	29104.3	34665.4	32789.9
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	LISGDAEPTPEQEEK	LISGDAEPTPEQEEK	2	LISGDAEPTPEQEEK2	29568.8	24952.8	28038.2
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	LISGPLSPMSR	LISGPLSPMSR	2	LISGPLSPMSR2	29245.8	18334.1	40754.6
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	LISGVMTSK	LISGVMTSK	2	LISGVMTSK2	37289	36581.7	38052.9
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	LISGWVSR	LISGWVSR	2	LISGWVSR2	74695.7	84589.2	72206.9
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	LISIIHSCR	LISIIHSC(UniMod:4)R	2	LISIIHSC(UniMod:4)R2	40514.8	32300.8	18006.3
F1M3J7	F1M3J7	F1M3J7_RAT	Cntnap4	Contactin associated protein family member 4	1	LISIQDK	LISIQDK	2	LISIQDK2	62801.3	65583.4	38937.4
A0A0G2JVT8	A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	1	LISLEYGTEAK	LISLEYGTEAK	2	LISLEYGTEAK2	8544.14	7523.87	
A0A0G2K543	A0A0G2K543	A0A0G2K543_RAT	C2cd5	C2 calcium-dependent domain containing 5	1	LISLMSGELQR	LISLMSGELQR	2	LISLMSGELQR2	19943.6	20584.4	19028.6
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	LISLTDENALAGNEELTVK	LISLTDENALAGNEELTVK	3	LISLTDENALAGNEELTVK3	354270	414335	380874
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	LISLTSALDENK	LISLTSALDENK	2	LISLTSALDENK2	61699.5	55660.9	77640.5
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	LISLTSALDENKDGNINIDDLVK	LISLTSALDENKDGNINIDDLVK	3	LISLTSALDENKDGNINIDDLVK3	43922	57355.3	45523.8
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	LISNGFFECER	LISNGFFEC(UniMod:4)ER	2	LISNGFFEC(UniMod:4)ER2	11935.6	12327.9	18847
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	LISNLQAQLDQAQSEQASQLDK	LISNLQAQLDQAQSEQASQLDK	3	LISNLQAQLDQAQSEQASQLDK3	12199.3	11714	13361.7
Q5M890	Q5M890	Q5M890_RAT	Apon	Apolipoprotein N	1	LISNPEIENATIPIEDR	LISNPEIENATIPIEDR	2	LISNPEIENATIPIEDR2	371047	287798	296082
Q5M890	Q5M890	Q5M890_RAT	Apon	Apolipoprotein N	1	LISNPEIENATIPIEDR	LISNPEIENATIPIEDR	3	LISNPEIENATIPIEDR3	328459	289833	353932
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	LISNPTNFNHIAHMGPGDGIQILK	LISNPTNFNHIAHMGPGDGIQILK	4	LISNPTNFNHIAHMGPGDGIQILK4	20063.6	25284.7	26735
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	LISPPVHLPR	LISPPVHLPR	2	LISPPVHLPR2	15502.7	12223.5	10349.2
D3ZZA8	D3ZZA8	D3ZZA8_RAT	Sec24a	SEC24 homolog A, COPII coat complex component	1	LISPTGGR	LISPTGGR	2	LISPTGGR2	22955.9	16442.4	16108
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	LISQACVSIFPDSGNFNVDNIR	LISQAC(UniMod:4)VSIFPDSGNFNVDNIR	3	LISQAC(UniMod:4)VSIFPDSGNFNVDNIR3	79526.3	68253.3	84461.2
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	LISQAYEVLSDPK	LISQAYEVLSDPK	2	LISQAYEVLSDPK2	58416.6	45851	44789.8
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	LISQAYEVLSDPKK	LISQAYEVLSDPKK	2	LISQAYEVLSDPKK2	2416.96	997.049	2266.6
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	LISQAYEVLSDPKK	LISQAYEVLSDPKK	3	LISQAYEVLSDPKK3	98013.7	98558.4	106485
Q5XIF6	Q5XIF6;Q6AYZ1;Q6P9V9;Q6AY56	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	LISQIVSSITASLR	LISQIVSSITASLR	2	LISQIVSSITASLR2	55818.5	56989.6	60437.4
Q5XIF6	Q5XIF6;Q6AYZ1;Q6P9V9;Q6AY56	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	LISQIVSSITASLR	LISQIVSSITASLR	3	LISQIVSSITASLR3	833993	591054	573880
P83941	A0A0G2K2A0;P83941;A0A096MIY6;A0A8I6AKW3	ELOC_RAT	Eloc	Elongin-C	0	LISSDGHEFIVK	LISSDGHEFIVK	2	LISSDGHEFIVK2	54644	41596.2	23828
P83941	A0A0G2K2A0;P83941;A0A096MIY6;A0A8I6AKW3	ELOC_RAT	Eloc	Elongin-C	0	LISSDGHEFIVK	LISSDGHEFIVK	3	LISSDGHEFIVK3	451945	462013	450132
A0A0G2JVT8	A0A8I6ARY9;A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	0	LISSPEGHNQDSR	LISSPEGHNQDSR	3	LISSPEGHNQDSR3	32271.6	29891.5	35050.6
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	LISSTESELQQSYAK	LISSTESELQQSYAK	2	LISSTESELQQSYAK2	21510.3	15521.2	6137.7
P31652	P31652	SC6A4_RAT	Slc6a4	Sodium-dependent serotonin transporter	1	LISTPGTLK	LISTPGTLK	2	LISTPGTLK2	435805	478583	379679
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	LISVEDLWK	LISVEDLWK	2	LISVEDLWK2	655978	664196	712074
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	LISVEPRPEQTEPDFQCSR	LISVEPRPEQTEPDFQC(UniMod:4)SR	3	LISVEPRPEQTEPDFQC(UniMod:4)SR3	146713	150365	170893
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	LISVETDIVVDHYKEEK	LISVETDIVVDHYKEEK	3	LISVETDIVVDHYKEEK3	9789.32		3924.1
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	LISVETDIVVDHYKEEK	LISVETDIVVDHYKEEK	4	LISVETDIVVDHYKEEK4	28110.5	17128.1	15256.6
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	LISVIDPSR	LISVIDPSR	2	LISVIDPSR2	65259.3	63204	62906.3
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	LISVLNK	LISVLNK	2	LISVLNK2	43998.1	31050.2	59632.7
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	LISWNGNYQK	LISWNGNYQK	2	LISWNGNYQK2	107881	107488	100997
A0A8I6AD02	Q498M9;F1LUV3;M0R660;D3ZEN2;E9PTN6;D3ZME3;M0R7H7;A0A0G2K8S2;D3ZGY4;E9PTV9;A0A8I6AD02;F1M2N4;P04797;F1M4G6	A0A8I6AD02_RAT	ENSRNOG00000069655	Glyceraldehyde 3-phosphate dehydrogenase NAD(P) binding domain-containing protein	0	LISWYDNEYGYSNR	LISWYDNEYGYSNR	2	LISWYDNEYGYSNR2	1.04369e+06	1.06619e+06	1.13404e+06
A0A8I6AD02	Q498M9;F1LUV3;M0R660;D3ZEN2;E9PTN6;D3ZME3;M0R7H7;A0A0G2K8S2;D3ZGY4;E9PTV9;A0A8I6AD02;F1M2N4;P04797;F1M4G6	A0A8I6AD02_RAT	ENSRNOG00000069655	Glyceraldehyde 3-phosphate dehydrogenase NAD(P) binding domain-containing protein	0	LISWYDNEYGYSNR	LISWYDNEYGYSNR	3	LISWYDNEYGYSNR3	440002	460907	501108
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	LISYSYMER	LISYSYMER	2	LISYSYMER2	89738.7	98378.7	92540.1
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	LITAANFCQNGK	LITAANFC(UniMod:4)QNGK	2	LITAANFC(UniMod:4)QNGK2	38651.1	36481.6	51958.2
A0A8I6G3S1	A0A8I6G3S1	A0A8I6G3S1_RAT	Mon1b	Vacuolar fusion protein MON1 homolog	1	LITAAQER	LITAAQER	2	LITAAQER2	21442.8	33679.4	22536
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	LITAEQR	LITAEQR	2	LITAEQR2			218499
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	LITAIGDVVNHDPAVGDR	LITAIGDVVNHDPAVGDR	3	LITAIGDVVNHDPAVGDR3	52681.1	63735.9	55653.8
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	LITAIYTDYAR	LITAIYTDYAR	2	LITAIYTDYAR2	20787.5	27638.6	28185.1
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	LITAVVMK	LITAVVMK	2	LITAVVMK2	92093.8	92320.1	63013.9
D4A0G9	D4A0G9	D4A0G9_RAT	Ercc6l	ERCC excision repair 6 like, spindle assembly checkpoint helicase	1	LITCGTVEEK	LITC(UniMod:4)GTVEEK	2	LITC(UniMod:4)GTVEEK2	13334.8	11839.4	13288.6
Q3B7U1	Q3B7U1;A0A8I6G9D7	Q3B7U1_RAT	Maged2	MAGE family member D2	0	LITDEFVK	LITDEFVK	2	LITDEFVK2	105000	110564	114690
Q62818	Q62818	EI2BB_RAT	Eif2b2	Translation initiation factor eIF-2B subunit beta	1	LITDHHWNNAGDLMDLIR	LITDHHWNNAGDLMDLIR	3	LITDHHWNNAGDLMDLIR3		9955.66	6257.3
Q62818	Q62818	EI2BB_RAT	Eif2b2	Translation initiation factor eIF-2B subunit beta	1	LITDHHWNNAGDLMDLIR	LITDHHWNNAGDLMDLIR	4	LITDHHWNNAGDLMDLIR4	9928.17	14826.5	13413.3
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	LITDLQDQNQK	LITDLQDQNQK	2	LITDLQDQNQK2	147764	146799	157600
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	LITDPTFKPCQMK	LITDPTFKPC(UniMod:4)QMK	3	LITDPTFKPC(UniMod:4)QMK3	73360.9	53481.3	63932.4
P49242	P49242;A0A8I6ABN0;M0R6L4	RS3A_RAT	Rps3a	Small ribosomal subunit protein eS1	0	LITEDVQGK	LITEDVQGK	2	LITEDVQGK2	82054.5	71398.4	62886.4
Q99NA5	Q99NA5	IDH3A_RAT	Idh3a	Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial	1	LITEGASK	LITEGASK	2	LITEGASK2	342319	367118	374892
D4A5S9	D4A5S9	D4A5S9_RAT	Prpf39	Pre-mRNA processing factor 39	1	LITEIENMR	LITEIENMR	2	LITEIENMR2	16670.9	19713.3	16711.3
P05508	P05508	NU4M_RAT	Mtnd4	NADH-ubiquinone oxidoreductase chain 4	1	LITGLTM	LITGLTM	1	LITGLTM1	23596.3	21993.8	21639
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	LITITTTLFPK	LITITTTLFPK	2	LITITTTLFPK2	24005.5	24974.9	14874.3
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	LITLEEEMTK	LITLEEEMTK	2	LITLEEEMTK2	2.1309e+06	2.55524e+06	2.60061e+06
Q02253	Q02253	MMSA_RAT	Aldh6a1	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial	1	LITLEQGK	LITLEQGK	2	LITLEQGK2	122354	106727	159134
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	LITLHDMESVDSEYYSSLR	LITLHDMESVDSEYYSSLR	3	LITLHDMESVDSEYYSSLR3	120818	152467	134906
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	LITNQSK	LITNQSK	2	LITNQSK2		30126.4	33519.7
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	LITNSEEIAFYNGNK	LITNSEEIAFYNGNK	2	LITNSEEIAFYNGNK2	5202.07	1884.98	2714.4
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	LITNSEEIAFYNGNKR	LITNSEEIAFYNGNKR	3	LITNSEEIAFYNGNKR3	9346.49	7820.43	17968.7
P62853	M0R763;F1M6F4;P62853	RS25_RAT	Rps25	Small ribosomal subunit protein eS25	0	LITPAVVSER	LITPAVVSER	2	LITPAVVSER2	55075.7	38080.2	56603.8
B5DF93	B5DF93	PATL1_RAT	Patl1	Protein PAT1 homolog 1	1	LITPQVAR	LITPQVAR	2	LITPQVAR2	55236.2	47901.3	51519.5
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	LITQDTESELK	LITQDTESELK	2	LITQDTESELK2	40719.4	37913.3	28323.8
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	LITQDTESELKK	LITQDTESELKK	2	LITQDTESELKK2	15094.4	9367.91	6023.66
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	LITQDTESELKK	LITQDTESELKK	3	LITQDTESELKK3	15438.1	13025.6	9507.49
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	LITQFHFTSWPDFGVPFTPIGMLK	LITQFHFTSWPDFGVPFTPIGMLK	3	LITQFHFTSWPDFGVPFTPIGMLK3		1867.5	2214.78
P01026	P01026	CO3_RAT	C3	Complement C3	1	LITQGESCLK	LITQGESC(UniMod:4)LK	2	LITQGESC(UniMod:4)LK2	2.15119e+06	2.10612e+06	1.92943e+06
Q63525	Q63525	NUDC_RAT	Nudc	Nuclear migration protein nudC	1	LITQTFNHHNQLAQK	LITQTFNHHNQLAQK	3	LITQTFNHHNQLAQK3	15683.9	26559.3	20671.4
Q63525	Q63525	NUDC_RAT	Nudc	Nuclear migration protein nudC	1	LITQTFNHHNQLAQK	LITQTFNHHNQLAQK	4	LITQTFNHHNQLAQK4	29546.5	26576.2	19546.1
Q6AYA6	Q6AYA6	CYBC1_RAT	Cybc1	Cytochrome b-245 chaperone 1	1	LITSFLELHR	LITSFLELHR	2	LITSFLELHR2	13363.3	7628.55	1597.98
Q6AYA6	Q6AYA6	CYBC1_RAT	Cybc1	Cytochrome b-245 chaperone 1	1	LITSFLELHR	LITSFLELHR	3	LITSFLELHR3	41175.1	35600.4	32284.9
Q499T5	Q499T5	Q499T5_RAT	Capn7	Calpain 7	1	LITSIIYPQNK	LITSIIYPQNK	2	LITSIIYPQNK2	11628.1	7534.82	3348.02
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	LITSQVFGK	LITSQVFGK	2	LITSQVFGK2	60192.4	54272.7	48250.2
Q99PW3	Q99PW3	NEUR1_RAT	Neu1	Sialidase-1	1	LIVCGHGTLER	LIVC(UniMod:4)GHGTLER	3	LIVC(UniMod:4)GHGTLER3	10014.9	10523.3	
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	LIVDAFLQQLPNCVNR	LIVDAFLQQLPNC(UniMod:4)VNR	2	LIVDAFLQQLPNC(UniMod:4)VNR2	4089.84	15704.6	2174.28
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	LIVDAFLQQLPNCVNR	LIVDAFLQQLPNC(UniMod:4)VNR	3	LIVDAFLQQLPNC(UniMod:4)VNR3	12700.4	11460.1	11967.8
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	LIVDEAINEDNSVVSLSQPK	LIVDEAINEDNSVVSLSQPK	3	LIVDEAINEDNSVVSLSQPK3	700367	702895	766626
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LIVDHLNGLSELNLPK	LIVDHLNGLSELNLPK	3	LIVDHLNGLSELNLPK3	6796.12	2234.8	3899.09
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	LIVDVIR	LIVDVIR	2	LIVDVIR2	47275.9	45727.5	46665.3
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LIVEMLER	LIVEMLER	2	LIVEMLER2	60879.8	107493	88600.3
G3V6S8	G3V798;G3V6S8;Q09167	SRSF6_RAT	Srsf6	Serine/arginine-rich splicing factor 6	0	LIVENLSSR	LIVENLSSR	2	LIVENLSSR2	42969.9	32274.9	48451.9
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	LIVISMMESGLSEEEAQRK	LIVISMMESGLSEEEAQRK	3	LIVISMMESGLSEEEAQRK3	27171.9	26868.7	27778.1
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	LIVISNR	LIVISNR	2	LIVISNR2	94986.9	116095	95466.4
Q4V8I7	Q4V8I7	LRC8A_RAT	Lrrc8a	Volume-regulated anion channel subunit LRRC8A	1	LIVLNSLK	LIVLNSLK	2	LIVLNSLK2		9479.36	8309.88
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	LIVMTYLCQIR	LIVMTYLC(UniMod:4)QIR	2	LIVMTYLC(UniMod:4)QIR2	31857.5	40020	28764.7
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	LIVMTYLCQIR	LIVMTYLC(UniMod:4)QIR	3	LIVMTYLC(UniMod:4)QIR3	5317.05	7858.12	2605.54
B4F7A3	B4F7A3	B4F7A3_RAT	Lgalsl	Galectin-like	1	LIVPFCGHIK	LIVPFC(UniMod:4)GHIK	3	LIVPFC(UniMod:4)GHIK3	90642	91528.3	114065
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	LIVPVLLDASVPPYDK	LIVPVLLDASVPPYDK	2	LIVPVLLDASVPPYDK2	51890.4	59102.4	52484
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	LIVPVLLDASVPPYDK	LIVPVLLDASVPPYDK	3	LIVPVLLDASVPPYDK3	18322.4	14669.1	14521.2
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	LIVPVLLDASVPPYDKIR	LIVPVLLDASVPPYDKIR	3	LIVPVLLDASVPPYDKIR3	33723.1	24735.5	53331
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	LIVQPNTR	LIVQPNTR	2	LIVQPNTR2	62862.4	55673.9	51626.7
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	LIVSNFSQAK	LIVSNFSQAK	2	LIVSNFSQAK2	27384	23202.5	38817
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LIVVGAGQPSEVR	LIVVGAGQPSEVR	2	LIVVGAGQPSEVR2	556980	564718	470151
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	LIVVVHSCR	LIVVVHSC(UniMod:4)R	2	LIVVVHSC(UniMod:4)R2	2443.72		1173.15
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	LIVYIVGGVAMSEMR	LIVYIVGGVAMSEMR	2	LIVYIVGGVAMSEMR2	21935.9	26969.4	22790.1
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	LIVYIVGGVAMSEMR	LIVYIVGGVAMSEMR	3	LIVYIVGGVAMSEMR3	5404.87	2867.81	8309.7
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	LIVYTILPNEELIADVQK	LIVYTILPNEELIADVQK	3	LIVYTILPNEELIADVQK3	205769	106433	128107
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	LIVYTILPNEELIADVQK	LIVYTILPNEELIADVQK	4	LIVYTILPNEELIADVQK4	7087.85	10755.8	3555.6
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	LIWGPHK	LIWGPHK	2	LIWGPHK2	34308.8	28709.3	12367.5
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	LIWLYQNLIK	LIWLYQNLIK	2	LIWLYQNLIK2	14764	13959.5	4441.82
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	LIWTSNR	LIWTSNR	2	LIWTSNR2	38924.1	48896.9	34704.5
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	LIYDFIEDQGGLEAVR	LIYDFIEDQGGLEAVR	2	LIYDFIEDQGGLEAVR2	145402	146721	161606
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	LIYDFIEDQGGLEAVR	LIYDFIEDQGGLEAVR	3	LIYDFIEDQGGLEAVR3	32420.5	27990	34230.2
F1M3Y4	F1M3Y4	F1M3Y4_RAT	LOC100361052	Ig-like domain-containing protein	1	LIYLATNR	LIYLATNR	2	LIYLATNR2	28830.8	21631.1	17402.5
M0RBP3	M0RBP3	M0RBP3_RAT	Nxpe1	Neurexophilin and PC-esterase domain family, member 1	1	LIYLLGDSTLR	LIYLLGDSTLR	2	LIYLLGDSTLR2	1614.97	5362.89	5369.55
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	LIYLVPEK	LIYLVPEK	2	LIYLVPEK2	20298	28868.6	23121.2
A0A8I5ZY02	A0A8I5ZY02;A0A8I5ZTK7	A0A8I5ZY02_RAT	ENSRNOG00000070192	Ig-like domain-containing protein	0	LIYLVSK	LIYLVSK	2	LIYLVSK2	111761	85872.2	89209.1
M0RDZ5	M0RDZ5	M0RDZ5_RAT	ENSRNOG00000066431	Ig-like domain-containing protein	1	LIYLVSNLGSGVPNR	LIYLVSNLGSGVPNR	2	LIYLVSNLGSGVPNR2	615087	558310	566471
M0RDZ5	M0RDZ5	M0RDZ5_RAT	ENSRNOG00000066431	Ig-like domain-containing protein	1	LIYLVSNLGSGVPNR	LIYLVSNLGSGVPNR	3	LIYLVSNLGSGVPNR3	132747	117761	115625
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	LIYQIENENTVDVYGIVYDLR	LIYQIENENTVDVYGIVYDLR	3	LIYQIENENTVDVYGIVYDLR3	12229.5	10622.5	13339.1
A0A8I6GC23	A0A8I6GC23;A0A8I6AAM9	A0A8I6GC23_RAT	ENSRNOG00000071049	Ig-like domain-containing protein	0	LIYQVSK	LIYQVSK	2	LIYQVSK2	43866.3	28954.1	34152.2
A0A0G2JY98	F1LYF1;A0A0G2JY98	A0A0G2JY98_RAT	ENSRNOG00000067883	Ig-like domain-containing protein	0	LIYQVSNLGSGVPDR	LIYQVSNLGSGVPDR	2	LIYQVSNLGSGVPDR2	57726.4	53661.3	59838.4
A0A0G2JY98	F1LYF1;A0A0G2JY98	A0A0G2JY98_RAT	ENSRNOG00000067883	Ig-like domain-containing protein	0	LIYQVSNLGSGVPDR	LIYQVSNLGSGVPDR	3	LIYQVSNLGSGVPDR3	5555.95	4216.51	5933.54
P0C0A1	P0C0A1	VPS25_RAT	Vps25	Vacuolar protein-sorting-associated protein 25	1	LIYQWVSR	LIYQWVSR	2	LIYQWVSR2	26930.7	30751.8	26864
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	LIYSTHMADEK	LIYSTHMADEK	3	LIYSTHMADEK3	14552.3	18619.7	14934.4
A0A8I6GLU1	A0A8I6GLU1	A0A8I6GLU1_RAT	ENSRNOG00000070189	Ig-like domain-containing protein	1	LIYSTSTLESGVPSR	LIYSTSTLESGVPSR	2	LIYSTSTLESGVPSR2	365520	302252	298142
A0A8I6GLU1	A0A8I6GLU1	A0A8I6GLU1_RAT	ENSRNOG00000070189	Ig-like domain-containing protein	1	LIYSTSTLESGVPSR	LIYSTSTLESGVPSR	3	LIYSTSTLESGVPSR3	35186.1	40835.3	27384.9
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	LIYTLQSSIDPASLK	LIYTLQSSIDPASLK	2	LIYTLQSSIDPASLK2	45502.5	36472.9	39627.3
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	LIYTLQSSIDPASLKK	LIYTLQSSIDPASLKK	3	LIYTLQSSIDPASLKK3	9528.94	15613.3	21682
P37136	P37136	ACES_RAT	Ache	Acetylcholinesterase	1	LKAPGGPVSAFLGIPFAEPPVGSR	LKAPGGPVSAFLGIPFAEPPVGSR	3	LKAPGGPVSAFLGIPFAEPPVGSR3	151256	156060	182205
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	LKCNGENDCGDNSDER	LKC(UniMod:4)NGENDC(UniMod:4)GDNSDER	2	LKC(UniMod:4)NGENDC(UniMod:4)GDNSDER2	985.349	1159.48	
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	LKDCIELFTTK	LKDC(UniMod:4)IELFTTK	2	LKDC(UniMod:4)IELFTTK2	12041.8		3308.05
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	LKDCIELFTTK	LKDC(UniMod:4)IELFTTK	3	LKDC(UniMod:4)IELFTTK3	28491	37717.2	22113.7
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	LKDCNVIATK	LKDC(UniMod:4)NVIATK	3	LKDC(UniMod:4)NVIATK3	10034.3	11380.5	5817.86
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	LKDEEISAAAIK	LKDEEISAAAIK	2	LKDEEISAAAIK2	8103.78		5347.69
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	LKDEEISAAAIK	LKDEEISAAAIK	3	LKDEEISAAAIK3	81413.7	95170.8	92053.6
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	LKDEETNEESGR	LKDEETNEESGR	3	LKDEETNEESGR3			5825.75
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	LKDEETNEESGRDLK	LKDEETNEESGRDLK	3	LKDEETNEESGRDLK3	7885.03	6568.09	8994.49
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	LKDEGWFLILGEVDK	LKDEGWFLILGEVDK	3	LKDEGWFLILGEVDK3	2843.14	2589.89	2679.72
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	LKDELASTK	LKDELASTK	2	LKDELASTK2	78414	72411.6	76563.9
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	LKDELASTKK	LKDELASTKK	2	LKDELASTKK2	5068.72		3302.2
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	LKDENAALIR	LKDENAALIR	2	LKDENAALIR2	10062.1	8360.62	10782.6
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	LKDENAALIR	LKDENAALIR	3	LKDENAALIR3	92790.4	95123.8	99408.2
Q10728	A0A8I6A6B6;Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	0	LKDENGALIR	LKDENGALIR	2	LKDENGALIR2	16933.2	18239.8	8829.31
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	LKDEVLK	LKDEVLK	2	LKDEVLK2	50564.1	38640.7	40180.6
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	LKDGENLENNMESLR	LKDGENLENNMESLR	3	LKDGENLENNMESLR3	46629.5	40357.9	51810.2
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	LKDGSLFWQSPK	LKDGSLFWQSPK	3	LKDGSLFWQSPK3	7970.23	14947.6	8543.83
A0A8I6AAR9	A0A0G2K916;A0A8I6AAR9	A0A8I6AAR9_RAT	Ankrd17	Ankyrin repeat domain 17	0	LKDGSTMLIEAAK	LKDGSTMLIEAAK	3	LKDGSTMLIEAAK3		9474.95	4290.64
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	LKDHHLVVPSVLQGLR	LKDHHLVVPSVLQGLR	4	LKDHHLVVPSVLQGLR4	4419.44	11758.7	12663.4
F1LQ09	F1LQ09	F1LQ09_RAT	Atl2	Atlastin GTPase 2	1	LKDIDEDFKR	LKDIDEDFKR	2	LKDIDEDFKR2	5186.97	2231.89	1270.52
F1LQ09	F1LQ09	F1LQ09_RAT	Atl2	Atlastin GTPase 2	1	LKDIDEDFKR	LKDIDEDFKR	3	LKDIDEDFKR3	44449.3	48705.8	33876.7
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	LKDINEFFTR	LKDINEFFTR	3	LKDINEFFTR3	11645.2	16921.4	14697.1
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	LKDLEALLNSK	LKDLEALLNSK	3	LKDLEALLNSK3	18323.7	29177.1	26180.5
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LKDLNSQADSLMTSSAFDTSQVK	LKDLNSQADSLMTSSAFDTSQVK	3	LKDLNSQADSLMTSSAFDTSQVK3	125655	167125	131150
P63144	P63144	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	1	LKDLSPIAER	LKDLSPIAER	2	LKDLSPIAER2	20730.5	14524.5	12744.1
P63144	P63144	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	1	LKDLSPIAER	LKDLSPIAER	3	LKDLSPIAER3	96157.7	102300	111936
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	LKDNYMEILNR	LKDNYMEILNR	3	LKDNYMEILNR3	19632.8	18017.4	20625.5
D3ZH22	D3ZH22	SWET1_RAT	Slc50a1	Sugar transporter SWEET1	1	LKDPYITVPNLPGILTGFIR	LKDPYITVPNLPGILTGFIR	3	LKDPYITVPNLPGILTGFIR3	7645.05		10622.9
Q9WVC0	Q9WVC0;A0A0G2JV25;A0A8I6ARI4	SEPT7_RAT	Septin7	Septin-7	0	LKDSEAELQR	LKDSEAELQR	2	LKDSEAELQR2	6978.65	5453.88	5816.86
Q9WVC0	Q9WVC0;A0A0G2JV25;A0A8I6ARI4	SEPT7_RAT	Septin7	Septin-7	0	LKDSEAELQR	LKDSEAELQR	3	LKDSEAELQR3	43685.3	43481	41799
P31211	P31211	CBG_RAT	Serpina6	Corticosteroid-binding globulin	1	LKDSFLADVK	LKDSFLADVK	2	LKDSFLADVK2	24461.8	19181.7	17813.6
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	LKDTENAIENMIGPDWK	LKDTENAIENMIGPDWK	3	LKDTENAIENMIGPDWK3	28537.1	27409.2	29841.3
A0A0G2KAU4	A0A0G2KAU4	A0A0G2KAU4_RAT	Rasgrp3	RAS guanyl releasing protein 3	1	LKDTHSHLSSEVTK	LKDTHSHLSSEVTK	3	LKDTHSHLSSEVTK3	7971.05		
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	LKDTQEQLSK	LKDTQEQLSK	2	LKDTQEQLSK2	14735.6	27472	12196.7
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	LKDTQEQLSK	LKDTQEQLSK	3	LKDTQEQLSK3	35822.4	41054.1	39282.5
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LKDVLLQVEDER	LKDVLLQVEDER	2	LKDVLLQVEDER2	20173.5	33474.3	26422.4
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LKDVLLQVEDER	LKDVLLQVEDER	3	LKDVLLQVEDER3	236636	291803	240237
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LKDVLLQVEDERR	LKDVLLQVEDERR	2	LKDVLLQVEDERR2	13548.3	17505.7	8309.52
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LKDVLLQVEDERR	LKDVLLQVEDERR	3	LKDVLLQVEDERR3	2.69045e+06	3.08325e+06	2.64706e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LKDVLLQVEDERR	LKDVLLQVEDERR	4	LKDVLLQVEDERR4	3.51873e+06	4.31699e+06	4.43079e+06
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	LKEAELLEPLMPAIR	LKEAELLEPLMPAIR	2	LKEAELLEPLMPAIR2	29554.7	38099.1	29145.1
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	LKEAELLEPLMPAIR	LKEAELLEPLMPAIR	3	LKEAELLEPLMPAIR3	192039	247305	225878
Q63610	Q63610;P58775;P09495;P04692;A0A8I5YC74	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	0	LKEAETR	LKEAETR	2	LKEAETR2			42841.3
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	LKEALQPLINR	LKEALQPLINR	3	LKEALQPLINR3	15418.2	22333.7	22188.2
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	LKEAQLPVIENK	LKEAQLPVIENK	2	LKEAQLPVIENK2	19359.7	15234.7	26467.7
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	LKEAQLPVIENK	LKEAQLPVIENK	3	LKEAQLPVIENK3	425553	390881	390377
P13264	P13264	GLSK_RAT	Gls	Glutaminase kidney isoform, mitochondrial	1	LKECMDMLR	LKEC(UniMod:4)MDMLR	3	LKEC(UniMod:4)MDMLR3	17476.4	15049.1	10723
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	LKECVAPVLSVLTECAR	LKEC(UniMod:4)VAPVLSVLTEC(UniMod:4)AR	3	LKEC(UniMod:4)VAPVLSVLTEC(UniMod:4)AR3	18155.7	12114.6	19817.9
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	LKEECELSSAELK	LKEEC(UniMod:4)ELSSAELK	3	LKEEC(UniMod:4)ELSSAELK3	16622.3	22423.1	17688.3
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	LKEECELSSAELKR	LKEEC(UniMod:4)ELSSAELKR	3	LKEEC(UniMod:4)ELSSAELKR3	5111.08	3129.12	3900.34
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	LKEECELSSAELKR	LKEEC(UniMod:4)ELSSAELKR	4	LKEEC(UniMod:4)ELSSAELKR4	5452.71	6450.49	7167.46
D4A3V5	D4A3V5	D4A3V5_RAT	Cgnl1	Cingulin-like 1	1	LKEEELR	LKEEELR	2	LKEEELR2	394150	335780	315935
Q66H09	Q66H09	Q66H09_RAT	Ttc1	Tetratricopeptide repeat domain 1	1	LKEEGNEQFK	LKEEGNEQFK	2	LKEEGNEQFK2	8824.08	6497.24	5847.56
Q66H09	Q66H09	Q66H09_RAT	Ttc1	Tetratricopeptide repeat domain 1	1	LKEEGNEQFK	LKEEGNEQFK	3	LKEEGNEQFK3	20723	33767.4	26123.4
Q4QQV2	Q4QQV2	DOK1_RAT	Dok1	Docking protein 1	1	LKEEGYELPYNPATDDYAVPPPR	LKEEGYELPYNPATDDYAVPPPR	3	LKEEGYELPYNPATDDYAVPPPR3	53381.9	51193.6	56858.4
P97694	P97694	CYH1_RAT	Cyth1	Cytohesin-1	1	LKEEIAEVANEIESLGSTEERK	LKEEIAEVANEIESLGSTEERK	4	LKEEIAEVANEIESLGSTEERK4	4159.29	3498.72	778.008
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	LKEEIER	LKEEIER	2	LKEEIER2		274540	
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	LKEEISK	LKEEISK	2	LKEEISK2	67741.4	89708.2	74203.9
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	LKEELEEAR	LKEELEEAR	2	LKEELEEAR2	46939.6	64895.2	38721.9
A0A8I5ZRV0	A0A8I5ZRV0	A0A8I5ZRV0_RAT	MGC94891	Translin-associated factor X-interacting protein 1 N-terminal domain-containing protein	1	LKEELQK	LKEELQK	2	LKEELQK2		11807.9	17319.2
Q8CGZ2	Q8CGZ2	ADIP_RAT	Ssx2ip	Afadin- and alpha-actinin-binding protein	1	LKEEWSLFK	LKEEWSLFK	3	LKEEWSLFK3	5508.43	1860.6	5545.63
Q6BBI8	Q6BBI8	UFC1_RAT	Ufc1	Ubiquitin-fold modifier-conjugating enzyme 1	1	LKEEYQSLIR	LKEEYQSLIR	3	LKEEYQSLIR3	22985.1	18458.3	26456
P19939	P19939	APOC1_RAT	Apoc1	Apolipoprotein C-I	1	LKEFGNTLEDK	LKEFGNTLEDK	2	LKEFGNTLEDK2	3.37729e+06	3.80551e+06	3.37922e+06
P19939	P19939	APOC1_RAT	Apoc1	Apolipoprotein C-I	1	LKEFGNTLEDK	LKEFGNTLEDK	3	LKEFGNTLEDK3	7.0815e+06	9.20735e+06	9.72836e+06
P19939	P19939	APOC1_RAT	Apoc1	Apolipoprotein C-I	1	LKEFGNTLEDKAR	LKEFGNTLEDKAR	4	LKEFGNTLEDKAR4	3273.57	7608.23	5964.61
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	LKEFLALASSSLLK	LKEFLALASSSLLK	3	LKEFLALASSSLLK3	19418.8	20017.3	26108.3
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LKEFQESFK	LKEFQESFK	3	LKEFQESFK3	16413.3	14559.4	9005.8
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	LKEFVLR	LKEFVLR	2	LKEFVLR2	54022.8	51686.2	31330
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	LKEFVLRDDLLEAR	LKEFVLRDDLLEAR	3	LKEFVLRDDLLEAR3	171398	215435	224598
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	LKEFVLRDDLLEAR	LKEFVLRDDLLEAR	4	LKEFVLRDDLLEAR4	150567	179978	197432
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	LKEGDTIIVPGVEGPIVTQIR	LKEGDTIIVPGVEGPIVTQIR	3	LKEGDTIIVPGVEGPIVTQIR3	59726.9	65884.2	50486.6
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	LKEGLDISHLQGQEELLSSQEK	LKEGLDISHLQGQEELLSSQEK	4	LKEGLDISHLQGQEELLSSQEK4	2820.01		11319.2
A0A8I6AEI1	A0A8I6AEI1	A0A8I6AEI1_RAT	Hps1	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1	1	LKEGQEAGSALR	LKEGQEAGSALR	3	LKEGQEAGSALR3	9753.16	9137.33	12341.9
D3ZE26	D3ZE26	D3ZE26_RAT	Tmcc2	Transmembrane and coiled-coil domain family 2	1	LKEIEQNGPSR	LKEIEQNGPSR	3	LKEIEQNGPSR3	9247.6	14233.3	9896.66
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	LKEIICEQAAIK	LKEIIC(UniMod:4)EQAAIK	3	LKEIIC(UniMod:4)EQAAIK3	4882.44	4002.25	
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	LKEISER	LKEISER	2	LKEISER2	14251.2	13875.7	
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	LKEIVADSDVMLK	LKEIVADSDVMLK	2	LKEIVADSDVMLK2	8406.39	6302.75	12170.6
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	LKEIVADSDVMLK	LKEIVADSDVMLK	3	LKEIVADSDVMLK3	41755.1	49998.2	35072.7
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	LKEIVTNFLAGFEP	LKEIVTNFLAGFEP	2	LKEIVTNFLAGFEP2	72066.9	77903.1	60286.1
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	LKEIYENMAPGENK	LKEIYENMAPGENK	2	LKEIYENMAPGENK2	18684.6	7438.53	10125.4
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	LKEIYENMAPGENK	LKEIYENMAPGENK	3	LKEIYENMAPGENK3	135972	162035	141085
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	LKELDEEHSQELK	LKELDEEHSQELK	3	LKELDEEHSQELK3	58394.6	50055.5	63621
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	LKELDEEHSQELK	LKELDEEHSQELK	4	LKELDEEHSQELK4	21470.7	41488.5	31877.4
Q5XI64	Q5XI64	ABHD6_RAT	Abhd6	Monoacylglycerol lipase ABHD6	1	LKELEDSAATQK	LKELEDSAATQK	2	LKELEDSAATQK2	8174.48	3178.89	5755.83
Q5XI64	Q5XI64	ABHD6_RAT	Abhd6	Monoacylglycerol lipase ABHD6	1	LKELEDSAATQK	LKELEDSAATQK	3	LKELEDSAATQK3	28177.8	37049.4	29931.7
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	LKELGATMDGFHR	LKELGATMDGFHR	3	LKELGATMDGFHR3	3031.76		4061.74
Q32Q07	Q32Q07	LRRN1_RAT	Lrrn1	Leucine-rich repeat neuronal protein 1	1	LKELGINNMGELVSVDR	LKELGINNMGELVSVDR	3	LKELGINNMGELVSVDR3	5296.03	4765.64	3317.55
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	LKELIFEETAR	LKELIFEETAR	2	LKELIFEETAR2	41938.4	39251	15787
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	LKELIFEETAR	LKELIFEETAR	3	LKELIFEETAR3	62985.6	123004	104986
P21708	P21708	MK03_RAT	Mapk3	Mitogen-activated protein kinase 3	1	LKELIFQETAR	LKELIFQETAR	3	LKELIFQETAR3	6970.83	3460.87	8384.8
P62483	P62483	KCAB2_RAT	Kcnab2	Voltage-gated potassium channel subunit beta-2	1	LKELQAIAER	LKELQAIAER	2	LKELQAIAER2	5661.22	7077.26	6379.12
P62483	P62483	KCAB2_RAT	Kcnab2	Voltage-gated potassium channel subunit beta-2	1	LKELQAIAER	LKELQAIAER	3	LKELQAIAER3	28244.3	36410.2	41812.2
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	LKENLYPYLGPSTLR	LKENLYPYLGPSTLR	3	LKENLYPYLGPSTLR3	43426.2	39382.8	38555.1
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	LKENWDYLLER	LKENWDYLLER	3	LKENWDYLLER3	24041.1	18864.6	26837.8
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	LKENYLK	LKENYLK	1	LKENYLK1	4164.43		6825.14
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	LKENYLK	LKENYLK	2	LKENYLK2	184619	194495	167835
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	LKEPCLK	LKEPC(UniMod:4)LK	2	LKEPC(UniMod:4)LK2	13516.2	9686.06	11036.8
Q9Z1S7	Q9Z1S7	OMD_RAT	Omd	Osteomodulin	1	LKEPISSYIFFCFPR	LKEPISSYIFFC(UniMod:4)FPR	2	LKEPISSYIFFC(UniMod:4)FPR2	4491.11	2013.1	5017.08
Q9Z1S7	Q9Z1S7	OMD_RAT	Omd	Osteomodulin	1	LKEPISSYIFFCFPR	LKEPISSYIFFC(UniMod:4)FPR	3	LKEPISSYIFFC(UniMod:4)FPR3	116865	110666	86920.7
Q32PX6	Q32PX6	Q32PX6_RAT	Rhog	Ras homolog family member G	1	LKEQGQAPITPQQGQALAK	LKEQGQAPITPQQGQALAK	3	LKEQGQAPITPQQGQALAK3	371627	356097	372149
O54923	O54923	EXOC6_RAT	Exoc6	Exocyst complex component 6	1	LKEQMSMQR	LKEQMSMQR	3	LKEQMSMQR3	15299.8		12868.2
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	LKESLPIEVDQLSGR	LKESLPIEVDQLSGR	3	LKESLPIEVDQLSGR3	95117.7	85539.7	93831.4
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	LKESQTQDNITVR	LKESQTQDNITVR	3	LKESQTQDNITVR3	3167.49	6843.15	8984.91
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	LKETAESVLK	LKETAESVLK	2	LKETAESVLK2	159893	202795	151608
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	LKETDQILAINGQVLDQTITHQQAISILQK	LKETDQILAINGQVLDQTITHQQAISILQK	4	LKETDQILAINGQVLDQTITHQQAISILQK4	6834.76	5581.68	6454.37
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	LKETEPGEAYVIQK	LKETEPGEAYVIQK	2	LKETEPGEAYVIQK2	2803.78	5007.26	1431.91
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	LKETEPGEAYVIQK	LKETEPGEAYVIQK	3	LKETEPGEAYVIQK3	6245.19	14303	17665.8
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	LKETHSHVSPDTIK	LKETHSHVSPDTIK	2	LKETHSHVSPDTIK2	2560.5	3769.11	
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	LKETHSHVSPDTIK	LKETHSHVSPDTIK	3	LKETHSHVSPDTIK3	218385	195020	131074
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	LKETHSHVSPDTIK	LKETHSHVSPDTIK	4	LKETHSHVSPDTIK4		404570	
Q641X8	Q641X8;A0A0G2K273	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	0	LKETIDNNSVSSPLQSLQQR	LKETIDNNSVSSPLQSLQQR	3	LKETIDNNSVSSPLQSLQQR3	50974.8	53024.3	58192.6
P19814	P19814	TGON3_RAT	Ttgn1	Trans-Golgi network integral membrane protein TGN38	1	LKETLQQLLPVDPK	LKETLQQLLPVDPK	2	LKETLQQLLPVDPK2	30915.3	28883.2	23947.8
P19814	P19814	TGON3_RAT	Ttgn1	Trans-Golgi network integral membrane protein TGN38	1	LKETLQQLLPVDPK	LKETLQQLLPVDPK	3	LKETLQQLLPVDPK3	151792	177656	177421
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	LKETVYNLR	LKETVYNLR	2	LKETVYNLR2	9946.69	4145.74	6074.02
A0A8I6AT07	A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	1	LKEVECYSVQR	LKEVEC(UniMod:4)YSVQR	3	LKEVEC(UniMod:4)YSVQR3	12852.1	15076.6	20031.6
A0A8I5ZVV7	A0A8I5ZVV7	A0A8I5ZVV7_RAT	ENSRNOG00000068286	Uncharacterized protein	1	LKEVLEYNTVGGK	LKEVLEYNTVGGK	2	LKEVLEYNTVGGK2	7635.62		
A0A8I5ZVV7	A0A8I5ZVV7	A0A8I5ZVV7_RAT	ENSRNOG00000068286	Uncharacterized protein	1	LKEVLEYNTVGGK	LKEVLEYNTVGGK	3	LKEVLEYNTVGGK3	28622.4	26991.4	27425.5
Q6P7R8	Q6P7R8	DHB12_RAT	Hsd17b12	Very-long-chain 3-oxoacyl-CoA reductase	1	LKEVSNNIK	LKEVSNNIK	2	LKEVSNNIK2	21706.1	22538.3	20485.4
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	LKEYEAAVEQLK	LKEYEAAVEQLK	2	LKEYEAAVEQLK2	9349.75	8025.78	6248.21
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	LKEYEAAVEQLK	LKEYEAAVEQLK	3	LKEYEAAVEQLK3	22586.6	26231.1	19942
D4A453	D4A453	D4A453_RAT	Cdc34	Cell division cycle 34, ubiqiutin conjugating enzyme	1	LKFPIDYPYSPPAFR	LKFPIDYPYSPPAFR	3	LKFPIDYPYSPPAFR3	3399.28	8690.2	13543.2
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	LKGNTEGLQK	LKGNTEGLQK	2	LKGNTEGLQK2	1.33418e+06		1.46774e+06
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	LKGSAPSDMLDSLTTIPELK	LKGSAPSDMLDSLTTIPELK	3	LKGSAPSDMLDSLTTIPELK3	19322.2	33670.9	26572.6
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	LKGVIDLIFEK	LKGVIDLIFEK	3	LKGVIDLIFEK3	8064.08	5526.48	5988.35
P18292	P18292	THRB_RAT	F2	Prothrombin	1	LKKPVPFSDYIHPVCLPDK	LKKPVPFSDYIHPVC(UniMod:4)LPDK	3	LKKPVPFSDYIHPVC(UniMod:4)LPDK3	7.67234e+06	8.02799e+06	7.45055e+06
P18292	P18292	THRB_RAT	F2	Prothrombin	1	LKKPVPFSDYIHPVCLPDK	LKKPVPFSDYIHPVC(UniMod:4)LPDK	4	LKKPVPFSDYIHPVC(UniMod:4)LPDK4	20577.8	19777.6	20613.8
Q68FU3	Q68FU3	ETFB_RAT	Etfb	Electron transfer flavoprotein subunit beta	1	LKLPAVVTADLR	LKLPAVVTADLR	3	LKLPAVVTADLR3	112334	95664.1	94302.4
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	LKNSLFDFQK	LKNSLFDFQK	3	LKNSLFDFQK3	5301.26	6299.57	
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	LKPAEDKEVLEQAQIK	LKPAEDKEVLEQAQIK	3	LKPAEDKEVLEQAQIK3	29870.2	37622.9	
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	LKPAEDKEVLEQAQIK	LKPAEDKEVLEQAQIK	4	LKPAEDKEVLEQAQIK4	10548.6	13417.3	
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	LKPAFFLESVDAHLQIGPLK	LKPAFFLESVDAHLQIGPLK	4	LKPAFFLESVDAHLQIGPLK4	5005.9	3765.84	6914.35
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	LKPATGSEVR	LKPATGSEVR	2	LKPATGSEVR2	16090.7	9994.08	15032.7
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	LKPCEDSPRK	LKPC(UniMod:4)EDSPRK	3	LKPC(UniMod:4)EDSPRK3			18892.3
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	LKPCPAGIIDQLSVIPNSNEPLK	LKPC(UniMod:4)PAGIIDQLSVIPNSNEPLK	3	LKPC(UniMod:4)PAGIIDQLSVIPNSNEPLK3	33742.7	32461.5	30238.5
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	LKPDDATIPLLAAK	LKPDDATIPLLAAK	3	LKPDDATIPLLAAK3	65760.3	67996.1	75420.4
A0A8I6GEV9	A0A8I6GEV9	A0A8I6GEV9_RAT	Abce1	ATP binding cassette subfamily E member 1	1	LKPDEGGEVPVLNVSYKPQK	LKPDEGGEVPVLNVSYKPQK	3	LKPDEGGEVPVLNVSYKPQK3	5357.21		
A0A8I6GEV9	A0A8I6GEV9	A0A8I6GEV9_RAT	Abce1	ATP binding cassette subfamily E member 1	1	LKPDEGGEVPVLNVSYKPQK	LKPDEGGEVPVLNVSYKPQK	4	LKPDEGGEVPVLNVSYKPQK4	21596.5	14674.5	10381.9
P70541	P70541	EI2BG_RAT	Eif2b3	Translation initiation factor eIF-2B subunit gamma	1	LKPDIVCIPDEADMGTADSLR	LKPDIVC(UniMod:4)IPDEADMGTADSLR	3	LKPDIVC(UniMod:4)IPDEADMGTADSLR3	20597.2	11084.2	9800.26
P21775	P21775	THIKA_RAT	Acaa1a	3-ketoacyl-CoA thiolase A, peroxisomal	1	LKPECLGDISVGNVLEPGAGAVMAR	LKPEC(UniMod:4)LGDISVGNVLEPGAGAVMAR	3	LKPEC(UniMod:4)LGDISVGNVLEPGAGAVMAR3	66630.2	61460.4	67539.6
M0RBQ8	M0RBQ8	M0RBQ8_RAT	Dennd1c	DENN/MADD domain containing 1C	1	LKPEGGPSEPLQER	LKPEGGPSEPLQER	3	LKPEGGPSEPLQER3	11998	12245.8	
D3ZW55	D3ZW55	ITPA_RAT	Itpa	Inosine triphosphate pyrophosphatase	1	LKPEGLYQLLAGFEDK	LKPEGLYQLLAGFEDK	3	LKPEGLYQLLAGFEDK3	7389.32	7407.62	6423.92
A0JPJ7	A0JPJ7	OLA1_RAT	Ola1	Obg-like ATPase 1	1	LKPEYDIMCK	LKPEYDIMC(UniMod:4)K	3	LKPEYDIMC(UniMod:4)K3	15473.1	12461.4	13996.2
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	LKPFFEGMSQSSSQTEIGSLNSK	LKPFFEGMSQSSSQTEIGSLNSK	3	LKPFFEGMSQSSSQTEIGSLNSK3	57833.1	65806.1	65447.7
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	LKPFLGSSDYVNQISGK	LKPFLGSSDYVNQISGK	3	LKPFLGSSDYVNQISGK3	9485.71	8190.93	11978.8
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	LKPGAPLRPK	LKPGAPLRPK	2	LKPGAPLRPK2	870950	583108	518839
G3V728	G3V728	G3V728_RAT	Nipsnap1	Nipsnap homolog 1	1	LKPGTMIEWGNNWAR	LKPGTMIEWGNNWAR	2	LKPGTMIEWGNNWAR2	11039	5428.49	7697.33
G3V728	G3V728	G3V728_RAT	Nipsnap1	Nipsnap homolog 1	1	LKPGTMIEWGNNWAR	LKPGTMIEWGNNWAR	3	LKPGTMIEWGNNWAR3	21241.2	21703.1	18184.1
F7EPH4	F7EPH4	F7EPH4_RAT	Ppa1	inorganic diphosphatase	1	LKPGYLEATVDWFR	LKPGYLEATVDWFR	3	LKPGYLEATVDWFR3	6500.74	4978.6	5234.5
A9CMA6	A9CMA6	TM163_RAT	Tmem163	Transmembrane protein 163	1	LKPHEAQNYR	LKPHEAQNYR	3	LKPHEAQNYR3			16376.4
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	LKPIISDPEYLLDQHILISIK	LKPIISDPEYLLDQHILISIK	3	LKPIISDPEYLLDQHILISIK3	35896.2	13739.3	10378.1
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	LKPIISDPEYLLDQHILISIK	LKPIISDPEYLLDQHILISIK	4	LKPIISDPEYLLDQHILISIK4	9960.88	12257.4	7686.08
Q63584	Q63584	TMEDA_RAT	Tmed10	Transmembrane emp24 domain-containing protein 10	1	LKPLEVELR	LKPLEVELR	2	LKPLEVELR2	325514	225332	215381
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	LKPLPGETMEK	LKPLPGETMEK	2	LKPLPGETMEK2	1.22896e+06	991237	1.02268e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	LKPLPGETMEK	LKPLPGETMEK	3	LKPLPGETMEK3	2.312e+06	2.3486e+06	2.46414e+06
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	LKPMQVALSQDDLTVLMK	LKPMQVALSQDDLTVLMK	3	LKPMQVALSQDDLTVLMK3	12440.5	9531.94	11372.6
Q63525	Q63525	NUDC_RAT	Nudc	Nuclear migration protein nudC	1	LKPNLGNGADLPNYR	LKPNLGNGADLPNYR	3	LKPNLGNGADLPNYR3	46526.7	30162.7	31005.1
P11960	P11960	ODBA_RAT	Bckdha	2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment)	1	LKPNPSLLFSDVYQEMPAQLR	LKPNPSLLFSDVYQEMPAQLR	3	LKPNPSLLFSDVYQEMPAQLR3	9552.23	8002.36	5070.89
A0A8I6GAE6	A0A8I6GAE6	A0A8I6GAE6_RAT	Ddx19b	RNA helicase	1	LKPQLLQGVYAMGFNRPSK	LKPQLLQGVYAMGFNRPSK	4	LKPQLLQGVYAMGFNRPSK4	5619.01	6931.98	3619.47
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	LKPSASFGSPVHSEALAPESVSHQR	LKPSASFGSPVHSEALAPESVSHQR	4	LKPSASFGSPVHSEALAPESVSHQR4	12698.1	9770.13	
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	LKPSSELHLTPK	LKPSSELHLTPK	3	LKPSSELHLTPK3	14466.7	14328.2	21700.5
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	LKPSVIIGVAGAGPLFTPGVIK	LKPSVIIGVAGAGPLFTPGVIK	3	LKPSVIIGVAGAGPLFTPGVIK3	8523.75	15293.5	17549.5
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	LKPTQFDLLTHMQK	LKPTQFDLLTHMQK	3	LKPTQFDLLTHMQK3	4.0252e+06	3.53053e+06	3.58394e+06
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	LKPTQFDLLTHMQK	LKPTQFDLLTHMQK	4	LKPTQFDLLTHMQK4	45429.3	35733.4	66163.5
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	LKPVGGHCALESK	LKPVGGHC(UniMod:4)ALESK	2	LKPVGGHC(UniMod:4)ALESK2	701558	570660	570780
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	LKPVGGHCALESK	LKPVGGHC(UniMod:4)ALESK	3	LKPVGGHC(UniMod:4)ALESK3	4.47551e+06	4.61466e+06	5.18829e+06
A0A8I6GL10	A0A8I6GL10	A0A8I6GL10_RAT	Uchl5	Ubiquitin carboxyl-terminal hydrolase	1	LKPVHGLIFLFK	LKPVHGLIFLFK	3	LKPVHGLIFLFK3	11226.9	12890.5	9987.9
Q4KLN3	Q4KLN3	Q4KLN3_RAT	Srpk1	SRSF protein kinase 1	1	LKPWGLLEVLVEK	LKPWGLLEVLVEK	3	LKPWGLLEVLVEK3	6551.65	5670.56	6257.75
B1WBT4	B1WBT4	B1WBT4_RAT	Srpk2	SRSF protein kinase 2	1	LKPWSLFDVLVEK	LKPWSLFDVLVEK	2	LKPWSLFDVLVEK2	7232.93	5397.6	12545.7
B1WBT4	B1WBT4	B1WBT4_RAT	Srpk2	SRSF protein kinase 2	1	LKPWSLFDVLVEK	LKPWSLFDVLVEK	3	LKPWSLFDVLVEK3	8837.6	6573.75	11170.3
Q63186	Q63186	EI2BD_RAT	Eif2b4	Translation initiation factor eIF-2B subunit delta	1	LKPYISFLTQCR	LKPYISFLTQC(UniMod:4)R	3	LKPYISFLTQC(UniMod:4)R3	5144.87		4937.27
P01015	P01015	ANGT_RAT	Agt	Angiotensinogen	1	LKQPFVESLGPFTPAIFPR	LKQPFVESLGPFTPAIFPR	3	LKQPFVESLGPFTPAIFPR3	326404	351554	330499
Q63515	Q63515	C4BPB_RAT	C4bpb	C4b-binding protein beta chain	1	LKSDILLNYHS	LKSDILLNYHS	3	LKSDILLNYHS3	4312.92	8457.1	10351.5
Q9JHU5	Q9JHU5	ARFP1_RAT	Arfip1	Arfaptin-1	1	LKTPGVDAPSWLEEQ	LKTPGVDAPSWLEEQ	2	LKTPGVDAPSWLEEQ2	9812.52	7530.46	15305.9
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	LKTPITFR	LKTPITFR	2	LKTPITFR2	4.21319e+06	3.74789e+06	3.94287e+06
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	LKTPITFRENVAPACLPQK	LKTPITFRENVAPAC(UniMod:4)LPQK	3	LKTPITFRENVAPAC(UniMod:4)LPQK3	9977.65	10468.1	20272.9
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	LKTPITFRENVAPACLPQK	LKTPITFRENVAPAC(UniMod:4)LPQK	4	LKTPITFRENVAPAC(UniMod:4)LPQK4	60889.3	54870.3	65762.9
P17074	F1M764;D3ZSH6;D3ZUD7;A0A8I6AHY3;D3ZGN8;P17074;A0A8I6ARG7	RS19_RAT	Rps19	Small ribosomal subunit protein eS19	0	LKVPEWVDTVK	LKVPEWVDTVK	3	LKVPEWVDTVK3	10288.7	5436.68	6060.21
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	LKYPVSK	LKYPVSK	2	LKYPVSK2	42349.3	46046.2	42835.8
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	LLAAALGYSEQPDVEPDALQK	LLAAALGYSEQPDVEPDALQK	3	LLAAALGYSEQPDVEPDALQK3	48128.7	43852.1	45137.5
O08654	O08654	PHAF1_RAT	Phaf1	Phagosome assembly factor 1	1	LLAAGCGPGVLADAK	LLAAGC(UniMod:4)GPGVLADAK	2	LLAAGC(UniMod:4)GPGVLADAK2			4647.15
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	LLAAGQLADALSQFHAAVDGDPDNYIAYYR	LLAAGQLADALSQFHAAVDGDPDNYIAYYR	4	LLAAGQLADALSQFHAAVDGDPDNYIAYYR4	4020.25	5057.16	7376.24
D3ZR63	D3ZR63	D3ZR63_RAT	Gfod1	Glucose-fructose oxidoreductase domain containing 1	1	LLAAGTDLYGQR	LLAAGTDLYGQR	2	LLAAGTDLYGQR2	16424.1	13732.9	27332.9
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	LLAAGVVSAMTCMVK	LLAAGVVSAMTC(UniMod:4)MVK	2	LLAAGVVSAMTC(UniMod:4)MVK2	11516.7	8627.2	8466.88
A0A8I6GAD6	A0A8I6GAD6	A0A8I6GAD6_RAT	Nrbp1	Nuclear receptor binding protein 1	1	LLAAHCIVGHQHMIPENALEEITK	LLAAHC(UniMod:4)IVGHQHMIPENALEEITK	3	LLAAHC(UniMod:4)IVGHQHMIPENALEEITK3	9221.03	8613.77	10954.3
A0A8I6GAD6	A0A8I6GAD6	A0A8I6GAD6_RAT	Nrbp1	Nuclear receptor binding protein 1	1	LLAAHCIVGHQHMIPENALEEITK	LLAAHC(UniMod:4)IVGHQHMIPENALEEITK	4	LLAAHC(UniMod:4)IVGHQHMIPENALEEITK4	76553.9	87766.7	75923.4
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	LLAAIDDIDRPK	LLAAIDDIDRPK	3	LLAAIDDIDRPK3	37506.7	46831.6	32411.6
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	LLAAIDDIDRPKR	LLAAIDDIDRPKR	3	LLAAIDDIDRPKR3	25425.3	16283.7	17882.3
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	LLAALLEDEGGNGR	LLAALLEDEGGNGR	2	LLAALLEDEGGNGR2	31587.4	22899.2	30404.5
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	LLAALLEDEGGNGRPLLQAAK	LLAALLEDEGGNGRPLLQAAK	3	LLAALLEDEGGNGRPLLQAAK3	2.74039e+06	2.56348e+06	2.93809e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	LLAALLEDEGGNGRPLLQAAK	LLAALLEDEGGNGRPLLQAAK	4	LLAALLEDEGGNGRPLLQAAK4	23154.4	21368.5	40299.5
A0A8I5ZKK5	A0A8I5ZKK5	A0A8I5ZKK5_RAT	Ncbp2as2	NCBP2 antisense 2 (head to head)	1	LLAALLNNPHLVER	LLAALLNNPHLVER	3	LLAALLNNPHLVER3	3074.26		1368.35
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	LLAATMEK	LLAATMEK	2	LLAATMEK2	67372.3	76468.9	65032.6
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	LLAAVMSALCHTSVK	LLAAVMSALC(UniMod:4)HTSVK	3	LLAAVMSALC(UniMod:4)HTSVK3	7133.18	6324.46	9251.57
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	LLAAVQDQCVEIR	LLAAVQDQC(UniMod:4)VEIR	2	LLAAVQDQC(UniMod:4)VEIR2	11209.6	7364.04	12077.2
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	LLACDGNEIDTMFVDR	LLAC(UniMod:4)DGNEIDTMFVDR	2	LLAC(UniMod:4)DGNEIDTMFVDR2	17807.7	16927.8	21477.4
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	LLACDGNEIDTMFVDRR	LLAC(UniMod:4)DGNEIDTMFVDRR	3	LLAC(UniMod:4)DGNEIDTMFVDRR3	187437	198209	181876
P62243	Q6TXJ0;D3ZIE1;P62243;M0R7Q5	RS8_RAT	Rps8	Small ribosomal subunit protein eS8	0	LLACIASR	LLAC(UniMod:4)IASR	2	LLAC(UniMod:4)IASR2	16832.8	22523.1	26628.5
P51111	P51111	HD_RAT	Htt	Huntingtin	1	LLACLQNVHK	LLAC(UniMod:4)LQNVHK	3	LLAC(UniMod:4)LQNVHK3	24280.6	37971.5	36480.2
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	LLADAHTVLGGHSTQDMLAALGK	LLADAHTVLGGHSTQDMLAALGK	3	LLADAHTVLGGHSTQDMLAALGK3	2921.91	948.565	3035.19
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	LLADAHTVLGGHSTQDMLAALGK	LLADAHTVLGGHSTQDMLAALGK	4	LLADAHTVLGGHSTQDMLAALGK4	2822.76	2093.5	
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	LLADELISPK	LLADELISPK	2	LLADELISPK2	51802	58313	56971.1
Q6P7B4	Q6P7B4	GAK1B_RAT	Gask1b	Golgi-associated kinase 1B	1	LLADGEVASILPTIFEGGTR	LLADGEVASILPTIFEGGTR	3	LLADGEVASILPTIFEGGTR3	4711.15	6939.26	2644.25
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	LLADMLSTGK	LLADMLSTGK	2	LLADMLSTGK2	623796	546975	566752
P84100	F1M5A9;P84100	RL19_RAT	Rpl19	Large ribosomal subunit protein eL19	0	LLADQAEAR	LLADQAEAR	2	LLADQAEAR2	67173.2	72506.7	57309.5
A0A8I6AVZ7	A0A8I6AVZ7	A0A8I6AVZ7_RAT	Mtcl1	Microtubule crosslinking factor 1	1	LLADSHGLVMDLR	LLADSHGLVMDLR	3	LLADSHGLVMDLR3	3062.25	8038.75	4275.29
F7EZQ4	F7EZQ4	F7EZQ4_RAT	Fcgbpl1	Fc fragment of IgG binding protein-like 1	1	LLADVQPCLDNDK	LLADVQPC(UniMod:4)LDNDK	2	LLADVQPC(UniMod:4)LDNDK2	65634.8	85876.1	82815.8
F7EZQ4	F7EZQ4	F7EZQ4_RAT	Fcgbpl1	Fc fragment of IgG binding protein-like 1	1	LLADVQPCLDNDKIVSK	LLADVQPC(UniMod:4)LDNDKIVSK	3	LLADVQPC(UniMod:4)LDNDKIVSK3	16522.3	16880.3	20176.4
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	LLADVQPCLNNDK	LLADVQPC(UniMod:4)LNNDK	2	LLADVQPC(UniMod:4)LNNDK2	1.80542e+06	1.99679e+06	1.84602e+06
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	LLADVQPCLNNDK	LLADVQPC(UniMod:4)LNNDK	3	LLADVQPC(UniMod:4)LNNDK3	28592.4	43957.2	29453
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	LLADVQPCLNNDKIVSK	LLADVQPC(UniMod:4)LNNDKIVSK	3	LLADVQPC(UniMod:4)LNNDKIVSK3	22603.3	23508.3	18467.5
P09215	P09215	KPCD_RAT	Prkcd	Protein kinase C delta type	1	LLAEALNQVTQK	LLAEALNQVTQK	2	LLAEALNQVTQK2	9574.11	14877.1	12792.1
P30427	P30427	PLEC_RAT	Plec	Plectin	1	LLAEENQR	LLAEENQR	2	LLAEENQR2	13086.9	12537.6	10923.3
D4A7F0	D4A7F0	D4A7F0_RAT	Ubr3	E3 ubiquitin-protein ligase	1	LLAEFASR	LLAEFASR	2	LLAEFASR2	21704.3	21103.6	31029
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	LLAEFDFR	LLAEFDFR	2	LLAEFDFR2	125921	115344	97722.6
Q3ZAU4	Q3ZAU4	Q3ZAU4_RAT	Kazald1	Kazal-type serine peptidase inhibitor domain 1	1	LLAEGEGCAPCRPEECAAPR	LLAEGEGC(UniMod:4)APC(UniMod:4)RPEEC(UniMod:4)AAPR	3	LLAEGEGC(UniMod:4)APC(UniMod:4)RPEEC(UniMod:4)AAPR3	80355.7	65860.3	75080.4
Q5M819	Q5M819	SERB_RAT	Psph	Phosphoserine phosphatase	1	LLAEHPPHLTPGIR	LLAEHPPHLTPGIR	4	LLAEHPPHLTPGIR4	4557.02	4024.01	
A0A8I6ACK9	A0A8I6A0D0;A0A8I6ACK9	A0A8I6ACK9_RAT	Abcg3l3	ATP-binding cassette, subfamily G (WHITE), member 3-like 3	0	LLAELIPR	LLAELIPR	2	LLAELIPR2	33995.5	29045.2	24124.8
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	LLAELPASVHALTGVDLSK	LLAELPASVHALTGVDLSK	3	LLAELPASVHALTGVDLSK3	59169.1	71162.1	76408.2
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	LLAENDKLTK	LLAENDKLTK	2	LLAENDKLTK2	4427.23	1879.66	2441.97
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	LLAENDKLTK	LLAENDKLTK	3	LLAENDKLTK3	32935.7	37375.8	32737
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	LLAENNEIISNIR	LLAENNEIISNIR	2	LLAENNEIISNIR2	25382.2	25378.8	20621.5
Q9EQX9	A0A8I6A248;Q9EQX9	UBE2N_RAT	Ube2n	Ubiquitin-conjugating enzyme E2 N	0	LLAEPVPGIK	LLAEPVPGIK	2	LLAEPVPGIK2	150693	116296	116212
D3ZRE7	D3ZRE7	D3ZRE7_RAT	Swap70	Switching B-cell complex subunit SWAP70	1	LLAEQEELER	LLAEQEELER	2	LLAEQEELER2	1956.36	1402.76	
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	LLAEQEVLAPQVVLAHGGSSPYHSQAPK	LLAEQEVLAPQVVLAHGGSSPYHSQAPK	4	LLAEQEVLAPQVVLAHGGSSPYHSQAPK4	3673.82	4093.52	5908.41
E9PSX8	E9PSX8	E9PSX8_RAT	Sipa1	Signal-induced proliferation-associated 1	1	LLAESESAATR	LLAESESAATR	2	LLAESESAATR2	9386.85	7770.47	10098.4
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LLAESVTEVEIFGK	LLAESVTEVEIFGK	2	LLAESVTEVEIFGK2	23833.7	32257.9	35210.6
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	LLAETVAPAVR	LLAETVAPAVR	2	LLAETVAPAVR2	250874	237940	286669
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	LLAETVAPAVR	LLAETVAPAVR	3	LLAETVAPAVR3	7394.59	8205.27	5575.85
D3ZUB7	D3ZUB7	D3ZUB7_RAT	Anapc4	Anaphase-promoting complex subunit 4	1	LLAFALADTK	LLAFALADTK	2	LLAFALADTK2	5458.28	14295.4	9550.08
D3ZUB7	D3ZUB7	D3ZUB7_RAT	Anapc4	Anaphase-promoting complex subunit 4	1	LLAFALADTKK	LLAFALADTKK	3	LLAFALADTKK3	8859.11	4106.44	4955.49
A0A0G2JV05	A0A0G2JV05	A0A0G2JV05_RAT	Mroh1	Maestro heat-like repeat family member 1	1	LLAFLLPR	LLAFLLPR	2	LLAFLLPR2	4334.5	6434.85	3141.84
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	LLAGDHPIELLLR	LLAGDHPIELLLR	2	LLAGDHPIELLLR2	37359.4	37966.4	26401
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	LLAGDHPIELLLR	LLAGDHPIELLLR	3	LLAGDHPIELLLR3	2.13684e+06	2.40388e+06	1.7948e+06
Q5XFW6	Q5XFW6	WDR6_RAT	Wdr6	WD repeat-containing protein 6	1	LLAGEGPDLLVYNLDFGGHLR	LLAGEGPDLLVYNLDFGGHLR	3	LLAGEGPDLLVYNLDFGGHLR3	10335.5	7892.25	8063.81
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	LLAGLHVLLSK	LLAGLHVLLSK	3	LLAGLHVLLSK3	3804.91	8263.18	1779.2
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	LLAGQQQVLQQLVEEEPK	LLAGQQQVLQQLVEEEPK	3	LLAGQQQVLQQLVEEEPK3	17745.1	17519.5	15040.6
D3ZXK7	D3ZXK7	RN123_RAT	Rnf123	E3 ubiquitin-protein ligase RNF123	1	LLAHGPSSETEQATSVLLADPCFQLR	LLAHGPSSETEQATSVLLADPC(UniMod:4)FQLR	3	LLAHGPSSETEQATSVLLADPC(UniMod:4)FQLR3	14596.4	11634.7	6530.89
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	LLAHILSPTHTVQER	LLAHILSPTHTVQER	4	LLAHILSPTHTVQER4	10012.5	14595.7	12448.2
P47858	P47858	PFKAM_RAT	Pfkm	ATP-dependent 6-phosphofructokinase, muscle type	1	LLAHVRPPVSK	LLAHVRPPVSK	3	LLAHVRPPVSK3	20376.7	19015.2	19594.4
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	LLAITELLQQK	LLAITELLQQK	2	LLAITELLQQK2	32820.7	44471.8	47693
D3ZX08	D3ZX08	SYAM_RAT	Aars2	Alanine--tRNA ligase, mitochondrial	1	LLAITGEQAQQAR	LLAITGEQAQQAR	2	LLAITGEQAQQAR2	3804.62	1513.03	2854.85
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	LLAITQEASDTSWQALIDEDR	LLAITQEASDTSWQALIDEDR	3	LLAITQEASDTSWQALIDEDR3	20465.5	20941.1	19737.4
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	LLAITQEASDTSWQALIDEDRLLSR	LLAITQEASDTSWQALIDEDRLLSR	3	LLAITQEASDTSWQALIDEDRLLSR3	41540.9	50165.5	74573
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	LLAIVAGLYEQEQYSDLK	LLAIVAGLYEQEQYSDLK	3	LLAIVAGLYEQEQYSDLK3	5709.85	7502.34	8144.97
Q99P74	Q99P74	RB27B_RAT	Rab27b	Ras-related protein Rab-27B	1	LLALGDSGVGK	LLALGDSGVGK	2	LLALGDSGVGK2	4.36156e+06	4.95986e+06	4.87718e+06
Q63798	Q63798	PSME2_RAT	Psme2	Proteasome activator complex subunit 2	1	LLALLALVKPEVWTLK	LLALLALVKPEVWTLK	3	LLALLALVKPEVWTLK3	5576.06	6489.76	
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	LLALLSLGEVGHHIDLSGQLELK	LLALLSLGEVGHHIDLSGQLELK	3	LLALLSLGEVGHHIDLSGQLELK3	23235.3	12358	8237.37
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	LLALLSLGEVGHHIDLSGQLELK	LLALLSLGEVGHHIDLSGQLELK	4	LLALLSLGEVGHHIDLSGQLELK4	16849.1	28518.3	20891.2
Q5XIR9	Q5XIR9	UBAC1_RAT	Ubac1	Ubiquitin-associated domain-containing protein 1	1	LLALNPDAVELFK	LLALNPDAVELFK	2	LLALNPDAVELFK2		4840.62	
B1WC18	B1WC18	B1WC18_RAT	Podxl2	Podocalyxin-like 2	1	LLALVEEVLPR	LLALVEEVLPR	2	LLALVEEVLPR2	7729.95	15714.8	13048.2
A0A8I6ACX1	A0A8I6ACX1	A0A8I6ACX1_RAT	LOC690000	Similar to CG3740-PA	1	LLAMLTTYVTK	LLAMLTTYVTK	2	LLAMLTTYVTK2	9158.5	6978.16	
G3V8V4	G3V8V4	G3V8V4_RAT	Cers2	Ceramide synthase 2	1	LLANGHPILNNNHPK	LLANGHPILNNNHPK	4	LLANGHPILNNNHPK4	2925.22	4561	3470.04
P28075	P28075	PSB5_RAT	Psmb5	Proteasome subunit beta type-5	1	LLANMVYQYK	LLANMVYQYK	2	LLANMVYQYK2	1.29297e+06	1.34335e+06	1.44026e+06
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	LLANQQVFHISCFR	LLANQQVFHISC(UniMod:4)FR	2	LLANQQVFHISC(UniMod:4)FR2	6705.47	5282.82	4315.99
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	LLANQQVFHISCFR	LLANQQVFHISC(UniMod:4)FR	3	LLANQQVFHISC(UniMod:4)FR3	131872	128292	96967.8
D3ZT51	D3ZT51	D3ZT51_RAT	Exosc3	Ribosomal RNA-processing protein 40	1	LLAPDCEIVQELGK	LLAPDC(UniMod:4)EIVQELGK	2	LLAPDC(UniMod:4)EIVQELGK2	1317.69		
Q4V7F5	Q4V7F5	PIHD1_RAT	Pih1d1	PIH1 domain-containing protein 1	1	LLAPELSDAESMGEETVR	LLAPELSDAESMGEETVR	2	LLAPELSDAESMGEETVR2	3059.8		2630.42
A0A8I5ZKH1	A0A8I5ZKH1	A0A8I5ZKH1_RAT	Ythdc2	RNA helicase	1	LLAPVNCTIADFLMK	LLAPVNC(UniMod:4)TIADFLMK	2	LLAPVNC(UniMod:4)TIADFLMK2	1344.74	2548.86	
B5DF45	B5DF45	TRAF6_RAT	Traf6	TNF receptor-associated factor 6	1	LLAQAVHNVNLSLRPCDASSPSR	LLAQAVHNVNLSLRPC(UniMod:4)DASSPSR	4	LLAQAVHNVNLSLRPC(UniMod:4)DASSPSR4	8317		7274.42
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	LLAQCSEVQLGK	LLAQC(UniMod:4)SEVQLGK	2	LLAQC(UniMod:4)SEVQLGK2	2039.51	4332.2	1197.81
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	LLAQDIR	LLAQDIR	2	LLAQDIR2	134148	133218	123583
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	LLAQECAVCGWALPR	LLAQEC(UniMod:4)AVC(UniMod:4)GWALPR	2	LLAQEC(UniMod:4)AVC(UniMod:4)GWALPR2	2253.91	3899.6	
A0A8I6G6W8	A0A8I5Y276;A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	LLAQQHPPPPDR	LLAQQHPPPPDR	3	LLAQQHPPPPDR3	87191.5	78565.6	74546
A0A8I5ZV26	A0A8I5ZV26	A0A8I5ZV26_RAT	Stom	Stomatin	1	LLAQTTLR	LLAQTTLR	2	LLAQTTLR2	4.5289e+06	4.40638e+06	4.70946e+06
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	LLASAGQDNIVR	LLASAGQDNIVR	2	LLASAGQDNIVR2	159255	152928	146858
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	LLASAGSNKEEK	LLASAGSNKEEK	2	LLASAGSNKEEK2	7132.39	7206.27	4026.88
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	LLASAGSNKEEK	LLASAGSNKEEK	3	LLASAGSNKEEK3	26138.1	26923.1	34323.3
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	LLASCSADMTIK	LLASC(UniMod:4)SADMTIK	2	LLASC(UniMod:4)SADMTIK2	19522.5	11543	12163.4
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	LLASIAEDYR	LLASIAEDYR	2	LLASIAEDYR2	29166.5	20329.5	22417.7
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	LLASIAEDYRK	LLASIAEDYRK	2	LLASIAEDYRK2	5299.75	8851.48	5086.02
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	LLASIAEDYRK	LLASIAEDYRK	3	LLASIAEDYRK3	23509.2	41031.7	26941.2
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	LLASINSTVR	LLASINSTVR	2	LLASINSTVR2	108276	79896.3	87922
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LLASLEELIK	LLASLEELIK	2	LLASLEELIK2	252313	259279	250445
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	LLASLLIK	LLASLLIK	2	LLASLLIK2	21297.6	22300.3	16581.5
Q63468	Q63468	KPRA_RAT	Prpsap1	Phosphoribosyl pyrophosphate synthase-associated protein 1	1	LLASMLAK	LLASMLAK	2	LLASMLAK2	21152.1	22066.8	21065.6
O08618	O08618	KPRB_RAT	Prpsap2	Phosphoribosyl pyrophosphate synthase-associated protein 2	1	LLASMMCK	LLASMMC(UniMod:4)K	2	LLASMMC(UniMod:4)K2	24759.4	34148.9	15575.9
A0A0G2JUT7	A0A0G2JUT7	A0A0G2JUT7_RAT	B3glct	Beta 3-glucosyltransferase	1	LLASNCR	LLASNC(UniMod:4)R	2	LLASNC(UniMod:4)R2	10151.9	8196.92	7013.34
Q9QZR8	Q9QZR8	PDZD2_RAT	Pdzd2	PDZ domain-containing protein 2	1	LLASVGNQQR	LLASVGNQQR	2	LLASVGNQQR2	6576.36	10557.8	7291.32
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	LLATEQEDAAVAK	LLATEQEDAAVAK	2	LLATEQEDAAVAK2	57576.9	49552	57684.4
A0A0G2JX20	A0A0G2JX20	A0A0G2JX20_RAT	Katnb1	Katanin p80 WD40 repeat-containing subunit B1	1	LLATGGDDCR	LLATGGDDC(UniMod:4)R	2	LLATGGDDC(UniMod:4)R2	10930.3	11612.5	10907.3
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	LLAVAATAPPDAPNR	LLAVAATAPPDAPNR	2	LLAVAATAPPDAPNR2	28962.9	19420.5	20466.9
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	LLAVAATAPPDAPNREEVFDER	LLAVAATAPPDAPNREEVFDER	3	LLAVAATAPPDAPNREEVFDER3	641187	556210	646243
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	LLAVAATAPPDAPNREEVFDER	LLAVAATAPPDAPNREEVFDER	4	LLAVAATAPPDAPNREEVFDER4	65950.1	39727.3	58616
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	LLAVIEEQHK	LLAVIEEQHK	3	LLAVIEEQHK3	37555.6	30007.3	45114.2
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	LLAVNSVCLEEVTHEEAVTALK	LLAVNSVC(UniMod:4)LEEVTHEEAVTALK	3	LLAVNSVC(UniMod:4)LEEVTHEEAVTALK3	18777.5	16183.7	7182.33
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	LLAVSGPFHYWGPVVDGQYLR	LLAVSGPFHYWGPVVDGQYLR	3	LLAVSGPFHYWGPVVDGQYLR3	18525.8	29322.9	30816.2
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	LLAVTLAGDLGLTFLHR	LLAVTLAGDLGLTFLHR	3	LLAVTLAGDLGLTFLHR3	1251.4	2371.15	3087.27
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	LLAVYTLPSWGR	LLAVYTLPSWGR	2	LLAVYTLPSWGR2	6458.59	7816.93	
D3ZUQ1	D3ZUQ1	D3ZUQ1_RAT	Lipo1	Lipase	1	LLAYFSPEAFK	LLAYFSPEAFK	2	LLAYFSPEAFK2	540109	538321	569814
P0CE43	P0CE43	GRB10_RAT	Grb10	Growth factor receptor-bound protein 10	1	LLCAEDEQIR	LLC(UniMod:4)AEDEQIR	2	LLC(UniMod:4)AEDEQIR2	22619.8	26429.6	27238.5
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	LLCDNGLCR	LLC(UniMod:4)DNGLC(UniMod:4)R	2	LLC(UniMod:4)DNGLC(UniMod:4)R2	10848.1	7964.96	8593.62
A0A0G2K4S7	A0A0G2K4S7	A0A0G2K4S7_RAT	Usp45	Ubiquitin carboxyl-terminal hydrolase	1	LLCEDCTEK	LLC(UniMod:4)EDC(UniMod:4)TEK	2	LLC(UniMod:4)EDC(UniMod:4)TEK2	5156.7		3706.15
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	LLCEELCSLNPMTDK	LLC(UniMod:4)EELC(UniMod:4)SLNPMTDK	2	LLC(UniMod:4)EELC(UniMod:4)SLNPMTDK2	14370	22070.9	20091.2
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	LLCEELCSLNPMTDK	LLC(UniMod:4)EELC(UniMod:4)SLNPMTDK	3	LLC(UniMod:4)EELC(UniMod:4)SLNPMTDK3	6726.12	5621.34	7484.4
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	LLCEELK	LLC(UniMod:4)EELK	2	LLC(UniMod:4)EELK2	9376.95	10695.6	
P29315	P29315	RINI_RAT	Rnh1	Ribonuclease inhibitor	1	LLCEGLR	LLC(UniMod:4)EGLR	2	LLC(UniMod:4)EGLR2	49346.9	11050.2	45897.3
P29315	P29315	RINI_RAT	Rnh1	Ribonuclease inhibitor	1	LLCEGLRDPQCR	LLC(UniMod:4)EGLRDPQC(UniMod:4)R	3	LLC(UniMod:4)EGLRDPQC(UniMod:4)R3	83227.8	72440.3	78089.1
A0A8I6A460	A0A8I6A460	A0A8I6A460_RAT	ENSRNOG00000069666	Uncharacterized protein	1	LLCESLK	LLC(UniMod:4)ESLK	2	LLC(UniMod:4)ESLK2	26515.4	19582.4	
Q2KJ09	Q2KJ09	UBP16_RAT	Usp16	Ubiquitin carboxyl-terminal hydrolase 16	1	LLCEVCTR	LLC(UniMod:4)EVC(UniMod:4)TR	2	LLC(UniMod:4)EVC(UniMod:4)TR2	8681.99	8125.49	9748.07
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	LLCGADVLK	LLC(UniMod:4)GADVLK	2	LLC(UniMod:4)GADVLK2	458545	423810	404668
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	LLCGGGAAADR	LLC(UniMod:4)GGGAAADR	2	LLC(UniMod:4)GGGAAADR2	795534	762998	837748
P30904	D4A3P7;D3ZE63;F1LTZ6;P30904	MIF_RAT	Mif	Macrophage migration inhibitory factor	0	LLCGLLSDR	LLC(UniMod:4)GLLSDR	2	LLC(UniMod:4)GLLSDR2	216409	159292	119888
A0A0G2KAF4	A0A0G2KAF4	A0A0G2KAF4_RAT	Nfxl1	Nuclear transcription factor, X-box binding-like 1	1	LLCGQHSCENPCHAGNCQPCPR	LLC(UniMod:4)GQHSC(UniMod:4)ENPC(UniMod:4)HAGNC(UniMod:4)QPC(UniMod:4)PR	4	LLC(UniMod:4)GQHSC(UniMod:4)ENPC(UniMod:4)HAGNC(UniMod:4)QPC(UniMod:4)PR4	5057.64	7458.25	5595.1
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	LLCMCPVDFHGIFQLDER	LLC(UniMod:4)MC(UniMod:4)PVDFHGIFQLDER	3	LLC(UniMod:4)MC(UniMod:4)PVDFHGIFQLDER3	10431.2	4743.84	
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	LLCNFMR	LLC(UniMod:4)NFMR	2	LLC(UniMod:4)NFMR2	3.7438e+06	3.82615e+06	3.76259e+06
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	LLCNGDNDCGDFSDESDCESDPR	LLC(UniMod:4)NGDNDC(UniMod:4)GDFSDESDC(UniMod:4)ESDPR	3	LLC(UniMod:4)NGDNDC(UniMod:4)GDFSDESDC(UniMod:4)ESDPR3	80189.2	42603.4	54310.8
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	LLCNGDNDCGDFSDESDCESDPRLPCR	LLC(UniMod:4)NGDNDC(UniMod:4)GDFSDESDC(UniMod:4)ESDPRLPC(UniMod:4)R	4	LLC(UniMod:4)NGDNDC(UniMod:4)GDFSDESDC(UniMod:4)ESDPRLPC(UniMod:4)R4	7820.09	10656.7	9912.56
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	LLCNGDNDCGDFSDESDCESDPRLPCRDR	LLC(UniMod:4)NGDNDC(UniMod:4)GDFSDESDC(UniMod:4)ESDPRLPC(UniMod:4)RDR	4	LLC(UniMod:4)NGDNDC(UniMod:4)GDFSDESDC(UniMod:4)ESDPRLPC(UniMod:4)RDR4	33858.5	43786.3	28987.7
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	LLCNGDNDCGDQSDEANCR	LLC(UniMod:4)NGDNDC(UniMod:4)GDQSDEANC(UniMod:4)R	3	LLC(UniMod:4)NGDNDC(UniMod:4)GDQSDEANC(UniMod:4)R3	4116.18	9119.35	7218.9
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	LLCNGDNDCGDQSDEANCRR	LLC(UniMod:4)NGDNDC(UniMod:4)GDQSDEANC(UniMod:4)RR	3	LLC(UniMod:4)NGDNDC(UniMod:4)GDQSDEANC(UniMod:4)RR3	33049.7	59573.1	42829.8
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	LLCPFER	LLC(UniMod:4)PFER	2	LLC(UniMod:4)PFER2	346023	338369	348475
D3ZL95	D3ZL95	D3ZL95_RAT	Usp40	ubiquitinyl hydrolase 1	1	LLCPVPDTSTLEEAEVK	LLC(UniMod:4)PVPDTSTLEEAEVK	2	LLC(UniMod:4)PVPDTSTLEEAEVK2	8298.03	2677.83	
P55797	P55797	APOC4_RAT	Apoc4	Apolipoprotein C-IV	1	LLCRDWTQG	LLC(UniMod:4)RDWTQG	2	LLC(UniMod:4)RDWTQG2	45765.7	46383	53482.9
A0A8I6ACX1	A0A8I6ACX1	A0A8I6ACX1_RAT	LOC690000	Similar to CG3740-PA	1	LLCSICQEK	LLC(UniMod:4)SIC(UniMod:4)QEK	2	LLC(UniMod:4)SIC(UniMod:4)QEK2	8135.76	12601.6	11183.2
D3ZQQ1	D3ZQQ1	D3ZQQ1_RAT	Aftph	Aftiphilin	1	LLCSLGIDTR	LLC(UniMod:4)SLGIDTR	2	LLC(UniMod:4)SLGIDTR2	10988	12560.2	10064.6
Q9Z1A5	Q9Z1A5	ULA1_RAT	Nae1	NEDD8-activating enzyme E1 regulatory subunit	1	LLCSNSAFLR	LLC(UniMod:4)SNSAFLR	2	LLC(UniMod:4)SNSAFLR2	11654.5	11569.1	12383.4
A0A0G2K6N9	A0A0G2K6N9	A0A0G2K6N9_RAT	Commd4	COMM domain containing 4	1	LLCSQVLK	LLC(UniMod:4)SQVLK	2	LLC(UniMod:4)SQVLK2	13551.1	9462.46	10557.8
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	LLCWADAGTK	LLC(UniMod:4)WADAGTK	2	LLC(UniMod:4)WADAGTK2	31368.1	33104.7	49631.4
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	LLCWADAGTKK	LLC(UniMod:4)WADAGTKK	3	LLC(UniMod:4)WADAGTKK3	17393.4	17480.1	15505.7
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LLDAEDVDVPSPDEK	LLDAEDVDVPSPDEK	2	LLDAEDVDVPSPDEK2	65452.6	64107.8	69442.8
P97532	P97532	THTM_RAT	Mpst	3-mercaptopyruvate sulfurtransferase	1	LLDASWYLPK	LLDASWYLPK	2	LLDASWYLPK2	68812.5	54111.2	77283.9
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	LLDAVDTYIPVPTR	LLDAVDTYIPVPTR	2	LLDAVDTYIPVPTR2	186953	197176	205244
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	LLDAVDTYIPVPTR	LLDAVDTYIPVPTR	3	LLDAVDTYIPVPTR3	46325.6	42166	50555
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	LLDCLLESHR	LLDC(UniMod:4)LLESHR	2	LLDC(UniMod:4)LLESHR2	5516.08	1705.51	
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	LLDCLLESHR	LLDC(UniMod:4)LLESHR	3	LLDC(UniMod:4)LLESHR3	45672	59665.5	56700
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	LLDCLQESHSFSK	LLDC(UniMod:4)LQESHSFSK	3	LLDC(UniMod:4)LQESHSFSK3	35526.6	50326.5	39242.1
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	LLDCSTEIK	LLDC(UniMod:4)STEIK	2	LLDC(UniMod:4)STEIK2	14737.9	22275.2	11992.7
Q5I0D1	Q5I0D1	GLOD4_RAT	Glod4	Glyoxalase domain-containing protein 4	1	LLDDAMAADK	LLDDAMAADK	2	LLDDAMAADK2	36921.2	41596.8	45616.9
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	LLDDLVTCASR	LLDDLVTC(UniMod:4)ASR	2	LLDDLVTC(UniMod:4)ASR2	885779	986901	939124
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	LLDDLVTCASR	LLDDLVTC(UniMod:4)ASR	3	LLDDLVTC(UniMod:4)ASR3		2806.45	
Q923V8	Q923V8	SEP15_RAT	Selenof	Selenoprotein F	1	LLDDNGNIAEELSILK	LLDDNGNIAEELSILK	2	LLDDNGNIAEELSILK2	16545.7	14025.1	15389.9
D3ZED8	D3ZED8	D3ZED8_RAT	Pmel	Premelanosome protein	1	LLDDTDTIMLVK	LLDDTDTIMLVK	2	LLDDTDTIMLVK2	11310.6	15357.8	20348.8
P53676	P53676	AP3M1_RAT	Ap3m1	AP-3 complex subunit mu-1	1	LLDDVSFHPCIR	LLDDVSFHPC(UniMod:4)IR	2	LLDDVSFHPC(UniMod:4)IR2	4093.59	756.263	6052.62
P53676	P53676	AP3M1_RAT	Ap3m1	AP-3 complex subunit mu-1	1	LLDDVSFHPCIR	LLDDVSFHPC(UniMod:4)IR	3	LLDDVSFHPC(UniMod:4)IR3	168640	178945	180363
P53678	P53678	AP3M2_RAT	Ap3m2	AP-3 complex subunit mu-2	1	LLDDVSFHPCVR	LLDDVSFHPC(UniMod:4)VR	3	LLDDVSFHPC(UniMod:4)VR3	12705.2	19228.1	8464.69
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	LLDEAIQAVK	LLDEAIQAVK	2	LLDEAIQAVK2	163262	130511	117936
P06760	P06760	BGLR_RAT	Gusb	Beta-glucuronidase	1	LLDEDGK	LLDEDGK	2	LLDEDGK2	18780.4	16153.9	22936.2
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	LLDEEEATDNDLR	LLDEEEATDNDLR	2	LLDEEEATDNDLR2	24206.5	30920.3	24602.4
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	LLDEFVSLHGPALR	LLDEFVSLHGPALR	3	LLDEFVSLHGPALR3	19175.5	22748.7	20319.6
O35314	O35314	SCG1_RAT	Chgb	Secretogranin-1	1	LLDEGHDPVHESPVDTAK	LLDEGHDPVHESPVDTAK	3	LLDEGHDPVHESPVDTAK3	2149.78		4578.36
O35314	O35314	SCG1_RAT	Chgb	Secretogranin-1	1	LLDEGHDPVHESPVDTAK	LLDEGHDPVHESPVDTAK	4	LLDEGHDPVHESPVDTAK4	4431.07	2929.91	4773.9
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	LLDELAGK	LLDELAGK	2	LLDELAGK2	199507	198658	167936
Q5RJQ4	Q5RJQ4	SIR2_RAT	Sirt2	NAD-dependent protein deacetylase sirtuin-2	1	LLDELTLEGVTR	LLDELTLEGVTR	2	LLDELTLEGVTR2	21063.2	14439.1	14139.5
Q9JM80	Q9JM80	PHAG1_RAT	Pag1	Phosphoprotein associated with glycosphingolipid-enriched microdomains 1	1	LLDENANLPEK	LLDENANLPEK	2	LLDENANLPEK2		16403.6	11987.7
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	LLDEQEQEDEEASTGSHLK	LLDEQEQEDEEASTGSHLK	3	LLDEQEQEDEEASTGSHLK3	19852.7	14322.5	18070.4
P21670	P21670	PSA4_RAT	Psma4	Proteasome subunit alpha type-4	1	LLDEVFFSEK	LLDEVFFSEK	2	LLDEVFFSEK2	3.17198e+06	3.25644e+06	3.54889e+06
D4AE98	D4AE98	D4AE98_RAT	Exosc8	Exosome component 8	1	LLDEVIQSMK	LLDEVIQSMK	2	LLDEVIQSMK2	4887.11	8599.81	9328.42
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	LLDEWFTLDEVPK	LLDEWFTLDEVPK	2	LLDEWFTLDEVPK2	20711.1	34813.7	19172.9
P04644	P04644;F1M5B1;M0R8M8;D3ZFA8	RS17_RAT	Rps17	Small ribosomal subunit protein eS17	0	LLDFGSLSNLQVTQPTVGMNFK	LLDFGSLSNLQVTQPTVGMNFK	3	LLDFGSLSNLQVTQPTVGMNFK3	32862.1	33466.6	16424.7
D4A7R3	D4A7R3	D4A7R3_RAT	Nup205	Nucleoporin 205	1	LLDFILK	LLDFILK	1	LLDFILK1	232189	235089	164178
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	LLDFLCR	LLDFLC(UniMod:4)R	2	LLDFLC(UniMod:4)R2	58700	60078.7	60837.3
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	LLDFLSR	LLDFLSR	2	LLDFLSR2	12044.6	7980.94	8949.8
Q5XIA1	Q5XIA1	NCLN_RAT	Ncln	BOS complex subunit NCLN	1	LLDFSYEHYQK	LLDFSYEHYQK	2	LLDFSYEHYQK2	1518.56	5187.53	4742.57
Q5XIA1	Q5XIA1	NCLN_RAT	Ncln	BOS complex subunit NCLN	1	LLDFSYEHYQK	LLDFSYEHYQK	3	LLDFSYEHYQK3	62244.8	51770.3	62513.8
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	LLDFTQAQLLQGLR	LLDFTQAQLLQGLR	2	LLDFTQAQLLQGLR2	6192.8	2562.35	4013.14
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	LLDFTQAQLLQGLR	LLDFTQAQLLQGLR	3	LLDFTQAQLLQGLR3	3264.8	3178.19	1939.98
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	LLDFVNQLR	LLDFVNQLR	2	LLDFVNQLR2	299682	273659	318375
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	LLDGAFK	LLDGAFK	2	LLDGAFK2	1.61308e+06	1.98303e+06	1.78074e+06
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	LLDGDRGPNTGGMGAYCPAPQVPK	LLDGDRGPNTGGMGAYC(UniMod:4)PAPQVPK	3	LLDGDRGPNTGGMGAYC(UniMod:4)PAPQVPK3	3634.95	2409.76	5708.33
Q62940	Q62940;A0A8I6AEH7	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	0	LLDGFFIR	LLDGFFIR	2	LLDGFFIR2	23685.8	23759.2	17967
Q62940	Q62940;A0A8I6AEH7	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	0	LLDGFFIRPFYK	LLDGFFIRPFYK	2	LLDGFFIRPFYK2	6280.84	6793.79	9442.57
Q62940	Q62940;A0A8I6AEH7	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	0	LLDGFFIRPFYK	LLDGFFIRPFYK	3	LLDGFFIRPFYK3	187616	166469	219162
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	LLDGLAQAR	LLDGLAQAR	2	LLDGLAQAR2	39967.5	39135.1	33055.8
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	LLDGLEVTAR	LLDGLEVTAR	2	LLDGLEVTAR2	98571.7	96640.4	61587.3
P0C5W1	P0C5W1	MAP1S_RAT	Map1s	Microtubule-associated protein 1S	1	LLDGLQR	LLDGLQR	2	LLDGLQR2	90915.2	78389.9	76118.4
A0A0G2JVT8	A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	1	LLDGQAEGK	LLDGQAEGK	2	LLDGQAEGK2	21000	15583.2	19953.1
B2GV52	B2GV52	BL1S5_RAT	Bloc1s5	Biogenesis of lysosome-related organelles complex 1 subunit 5	1	LLDHRPVTQGEIR	LLDHRPVTQGEIR	3	LLDHRPVTQGEIR3	11525.6	14262.9	12801.1
P24268	P24268	CATD_RAT	Ctsd	Cathepsin D	1	LLDIACWVHHK	LLDIAC(UniMod:4)WVHHK	3	LLDIAC(UniMod:4)WVHHK3	21165.3	25822.4	17896.8
D4A7R3	D4A7R3	D4A7R3_RAT	Nup205	Nucleoporin 205	1	LLDIEGLYSK	LLDIEGLYSK	2	LLDIEGLYSK2	8712.19	8633.94	12002.9
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	LLDIVAR	LLDIVAR	2	LLDIVAR2	32288.1	30662.6	37497.3
A0A8I6AS90	A0A8I6AS90	A0A8I6AS90_RAT	Arl10	ADP-ribosylation factor like GTPase 10	1	LLDKDPDLPVVIVANK	LLDKDPDLPVVIVANK	3	LLDKDPDLPVVIVANK3	10445.1	7240.94	4531.34
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	LLDKEHVTLQELMDEDDILQECK	LLDKEHVTLQELMDEDDILQEC(UniMod:4)K	3	LLDKEHVTLQELMDEDDILQEC(UniMod:4)K3	5580.84	3067.77	9282.56
A0A8I6GFC7	A0A8I6GFC7	A0A8I6GFC7_RAT	Ubp1	Upstream binding protein 1	1	LLDLDIPMSVGIIDTR	LLDLDIPMSVGIIDTR	2	LLDLDIPMSVGIIDTR2	6148.01		8882.49
G3V8S9	G3V8S9	G3V8S9_RAT	Camp	Cathelicidin antimicrobial peptide	1	LLDLDSEPQGDEDPDTPK	LLDLDSEPQGDEDPDTPK	3	LLDLDSEPQGDEDPDTPK3	9594.1	8069.53	11615.8
Q5HZY0	Q5HZY0	UBXN4_RAT	Ubxn4	UBX domain-containing protein 4	1	LLDLELAPSASVVLLPAGR	LLDLELAPSASVVLLPAGR	2	LLDLELAPSASVVLLPAGR2	12636.8	7391.69	12127.9
Q5HZY0	Q5HZY0	UBXN4_RAT	Ubxn4	UBX domain-containing protein 4	1	LLDLELAPSASVVLLPAGR	LLDLELAPSASVVLLPAGR	3	LLDLELAPSASVVLLPAGR3	5575.18		5025.33
D3ZGW2	D3ZGW2	D3ZGW2_RAT	Ap1g2	AP-1 complex subunit gamma	1	LLDLLDLLDDTSGHAQR	LLDLLDLLDDTSGHAQR	3	LLDLLDLLDDTSGHAQR3	5592.15		
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LLDLLEGLTGTSLPK	LLDLLEGLTGTSLPK	2	LLDLLEGLTGTSLPK2	138651	130395	170352
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LLDLLEGLTGTSLPK	LLDLLEGLTGTSLPK	3	LLDLLEGLTGTSLPK3	12004	12249.5	15113.7
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	LLDLVFLLDGSYR	LLDLVFLLDGSYR	3	LLDLVFLLDGSYR3	6762.33		
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	LLDMDGIIVEK	LLDMDGIIVEK	2	LLDMDGIIVEK2	217659	228997	215533
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	LLDMLSK	LLDMLSK	2	LLDMLSK2	140187	127068	127900
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	LLDMMQSLATGCSSSSSLK	LLDMMQSLATGC(UniMod:4)SSSSSLK	3	LLDMMQSLATGC(UniMod:4)SSSSSLK3	8636.4	11324.3	9485.81
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	LLDMMQSLATGCSSSSSLKEHLEGATEK	LLDMMQSLATGC(UniMod:4)SSSSSLKEHLEGATEK	4	LLDMMQSLATGC(UniMod:4)SSSSSLKEHLEGATEK4	5039.26		7192.1
Q62639	Q62639	RHEB_RAT	Rheb	GTP-binding protein Rheb	1	LLDMVGK	LLDMVGK	2	LLDMVGK2	142524	127477	160609
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LLDPEDISVDHPDEK	LLDPEDISVDHPDEK	2	LLDPEDISVDHPDEK2	40766.1	53801.1	30961.8
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LLDPEDISVDHPDEK	LLDPEDISVDHPDEK	3	LLDPEDISVDHPDEK3	540561	664360	622445
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LLDPEDVAVQLPDK	LLDPEDVAVQLPDK	2	LLDPEDVAVQLPDK2	17593.5	19416.9	16200.5
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LLDPEDVAVQLPDKK	LLDPEDVAVQLPDKK	2	LLDPEDVAVQLPDKK2	6201.28	19928.3	10878.1
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LLDPEDVAVQLPDKK	LLDPEDVAVQLPDKK	3	LLDPEDVAVQLPDKK3	317782	323198	310975
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	LLDPEPYVGEMSTATLAR	LLDPEPYVGEMSTATLAR	3	LLDPEPYVGEMSTATLAR3	12736.1	11452.1	18128.5
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	LLDPQEFTLSGTQR	LLDPQEFTLSGTQR	2	LLDPQEFTLSGTQR2	177393	261587	178159
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	LLDPQEFTLSGTQR	LLDPQEFTLSGTQR	3	LLDPQEFTLSGTQR3	46763.9	68875.4	55818.2
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	LLDPQGPLK	LLDPQGPLK	2	LLDPQGPLK2	2.36909e+06	2.31318e+06	2.11869e+06
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	LLDPQINTEIANYPIYK	LLDPQINTEIANYPIYK	3	LLDPQINTEIANYPIYK3	25647.4	28303.2	29638.2
E9PT91	E9PT91	E9PT91_RAT	Alg8	Alpha-1,3-glucosyltransferase	1	LLDPSQIPR	LLDPSQIPR	2	LLDPSQIPR2	25277.5	13229.5	18548.9
Q9QWE9	Q9QWE9	GGT5_RAT	Ggt5	Glutathione hydrolase 5 proenzyme	1	LLDQCTNALPLCTGAQWIGVPGELR	LLDQC(UniMod:4)TNALPLC(UniMod:4)TGAQWIGVPGELR	3	LLDQC(UniMod:4)TNALPLC(UniMod:4)TGAQWIGVPGELR3	38599.6	47030	27915
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	LLDQNKDSLINFK	LLDQNKDSLINFK	3	LLDQNKDSLINFK3	13552	18041.4	
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	LLDQYQEFDSLHWFQSVR	LLDQYQEFDSLHWFQSVR	3	LLDQYQEFDSLHWFQSVR3	13778.8	11207.4	24623.5
Q6IMX7	Q6IMX7	HPBP1_RAT	Hspbp1	Hsp70-binding protein 1	1	LLDRDSCDTVR	LLDRDSC(UniMod:4)DTVR	3	LLDRDSC(UniMod:4)DTVR3	8046.91	8980.3	
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	LLDSEIK	LLDSEIK	2	LLDSEIK2	286334	311640	322512
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	LLDSFIYEDQIRPQDRDELLR	LLDSFIYEDQIRPQDRDELLR	3	LLDSFIYEDQIRPQDRDELLR3	6304.69		7262.1
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	LLDSFIYEDQIRPQDRDELLR	LLDSFIYEDQIRPQDRDELLR	4	LLDSFIYEDQIRPQDRDELLR4	15271.3	11848.2	13153.7
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	LLDSITVPVAR	LLDSITVPVAR	2	LLDSITVPVAR2	106203	113033	109965
A0A0G2K9K4	A0A0G2K9K4	A0A0G2K9K4_RAT	Tfg	Trafficking from ER to golgi regulator	1	LLDSLEPPGEPGPSTSIPENDTVDGR	LLDSLEPPGEPGPSTSIPENDTVDGR	3	LLDSLEPPGEPGPSTSIPENDTVDGR3	24438	15825.5	7273.19
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	LLDSSTVTHLFK	LLDSSTVTHLFK	2	LLDSSTVTHLFK2	692165	636282	805648
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	LLDSSTVTHLFK	LLDSSTVTHLFK	3	LLDSSTVTHLFK3	8639.33	8659.24	12863
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	LLDSSTVTHLFKITENIGCVMTGMTADSR	LLDSSTVTHLFKITENIGC(UniMod:4)VMTGMTADSR	4	LLDSSTVTHLFKITENIGC(UniMod:4)VMTGMTADSR4	2792.41	625.527	3280.03
B0BMY7	B0BMY7	B0BMY7_RAT	Twf2	Twinfilin actin-binding protein 2	1	LLDSVEQDFQLEIAK	LLDSVEQDFQLEIAK	3	LLDSVEQDFQLEIAK3	4355.77	5099.52	3435.64
A0A8I6G3S1	A0A8I6G3S1	A0A8I6G3S1_RAT	Mon1b	Vacuolar fusion protein MON1 homolog	1	LLDSVEQDPGALLLGAVR	LLDSVEQDPGALLLGAVR	2	LLDSVEQDPGALLLGAVR2	3783.09	4349.28	2929.04
Q4KM64	Q4KM64	JAGN1_RAT	Jagn1	Protein jagunal homolog 1	1	LLDSWFTSTQEK	LLDSWFTSTQEK	2	LLDSWFTSTQEK2	59412.3	53935.8	51990.3
Q4KM64	Q4KM64	JAGN1_RAT	Jagn1	Protein jagunal homolog 1	1	LLDSWFTSTQEKK	LLDSWFTSTQEKK	3	LLDSWFTSTQEKK3		6781.84	
D3ZQ30	D3ZQ30	D3ZQ30_RAT	Telo2	Telomere length regulation protein TEL2 homolog	1	LLDTFLHAGR	LLDTFLHAGR	3	LLDTFLHAGR3	3187.51	4437.7	6643.08
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	LLDTGETDLMLAALR	LLDTGETDLMLAALR	2	LLDTGETDLMLAALR2	7990.47	8564.52	7468.23
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	LLDTIGISQPQWR	LLDTIGISQPQWR	2	LLDTIGISQPQWR2	57707.8	61166.4	79451.9
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	LLDTLKK	LLDTLKK	2	LLDTLKK2	20535.3	25768.5	27207.4
Q9WTN5	Q9WTN5	TPC1_RAT	Tpcn1	Two pore calcium channel protein 1	1	LLDTLSQMEK	LLDTLSQMEK	2	LLDTLSQMEK2	45026.7	41530.6	33966.4
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	LLDTNPEINQSDSQDSR	LLDTNPEINQSDSQDSR	3	LLDTNPEINQSDSQDSR3	1758.62	5616.98	7809.77
Q641Z6	Q641Z6	EHD1_RAT	Ehd1	EH domain-containing protein 1	1	LLDTVDDMLANDIAR	LLDTVDDMLANDIAR	2	LLDTVDDMLANDIAR2	10973.6	6954.29	14393.5
Q641Z6	Q641Z6	EHD1_RAT	Ehd1	EH domain-containing protein 1	1	LLDTVDDMLANDIAR	LLDTVDDMLANDIAR	3	LLDTVDDMLANDIAR3	7248.46	6707.3	
Q923V4	Q923V4	FBX6_RAT	Fbxo6	F-box only protein 6	1	LLDTVRPDIVVK	LLDTVRPDIVVK	3	LLDTVRPDIVVK3	251340	278435	247677
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	LLDVEGTGWQQQTPK	LLDVEGTGWQQQTPK	2	LLDVEGTGWQQQTPK2	12529.1	9596.21	16386.6
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	LLDVVHPAAK	LLDVVHPAAK	2	LLDVVHPAAK2	70809.8	62283	57383.8
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	LLDVVNQR	LLDVVNQR	2	LLDVVNQR2	39481.5	38346.2	39267.7
P08541	F1M3E3;P08541	UD2B2_RAT	Ugt2b	UDP-glucuronosyltransferase 2B2	0	LLDVWTYELPR	LLDVWTYELPR	2	LLDVWTYELPR2	4844.36	9776.53	
Q568Z3	Q568Z3	Q568Z3_RAT	Paqr4	Progestin and adipoQ receptor family member 4	1	LLDWASSPPHLQFNK	LLDWASSPPHLQFNK	3	LLDWASSPPHLQFNK3	24890.4	37139.4	40467.4
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	LLDWIEGK	LLDWIEGK	2	LLDWIEGK2	62655.6	66173.6	69892.8
Q9JLH7	Q9JLH7	CK5P3_RAT	Cdk5rap3	CDK5 regulatory subunit-associated protein 3	1	LLDWLVDR	LLDWLVDR	2	LLDWLVDR2	28355.5	27463.1	20249.7
Q9JLH7	Q9JLH7	CK5P3_RAT	Cdk5rap3	CDK5 regulatory subunit-associated protein 3	1	LLDWLVDRR	LLDWLVDRR	3	LLDWLVDRR3	70407.4	73077.6	82773.7
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	LLDYLNHDWK	LLDYLNHDWK	3	LLDYLNHDWK3	41976.4	49445	47449.6
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	LLDYLVIVGAR	LLDYLVIVGAR	2	LLDYLVIVGAR2	19492	10514.4	19469.8
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	LLDYVPIGPR	LLDYVPIGPR	2	LLDYVPIGPR2	103650	94571.3	100280
P30427	P30427	PLEC_RAT	Plec	Plectin	1	LLEAAAQSSK	LLEAAAQSSK	2	LLEAAAQSSK2	10829.5	5715.48	10471.5
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	LLEACTFHK	LLEAC(UniMod:4)TFHK	2	LLEAC(UniMod:4)TFHK2	686594	541018	439324
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	LLEACTFHKS	LLEAC(UniMod:4)TFHKS	2	LLEAC(UniMod:4)TFHKS2	10661.6	11936.2	8781.23
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	LLEACTFHKS	LLEAC(UniMod:4)TFHKS	3	LLEAC(UniMod:4)TFHKS3	49217.1	76648.6	91319.3
E9PU37	E9PU37	E9PU37_RAT	Zdhhc13	Palmitoyltransferase	1	LLEAGSSLDLR	LLEAGSSLDLR	2	LLEAGSSLDLR2	31156.5	23500.9	17463.3
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	LLEAHEEQNVDSYTESVK	LLEAHEEQNVDSYTESVK	3	LLEAHEEQNVDSYTESVK3	160371	141226	127991
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	LLEAHEEQNVDSYTESVKEYDSISR	LLEAHEEQNVDSYTESVKEYDSISR	4	LLEAHEEQNVDSYTESVKEYDSISR4	57466.2	63495.9	81439.2
Q4V8H8	Q4V8H8	EHD2_RAT	Ehd2	EH domain-containing protein 2	1	LLEALDEMLTHDIAK	LLEALDEMLTHDIAK	3	LLEALDEMLTHDIAK3	1224.36	4645.87	4470.95
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	LLEALLGEAGLQDPSVQGK	LLEALLGEAGLQDPSVQGK	2	LLEALLGEAGLQDPSVQGK2	7057.19	3801.89	6528.33
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	LLEALLGEAGLQDPSVQGK	LLEALLGEAGLQDPSVQGK	3	LLEALLGEAGLQDPSVQGK3	14336.8	9425.88	12957.1
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	LLEALQLSLPAEAQNK	LLEALQLSLPAEAQNK	2	LLEALQLSLPAEAQNK2	201983	209538	189964
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	LLEALQLSLPAEAQNK	LLEALQLSLPAEAQNK	3	LLEALQLSLPAEAQNK3	89310.1	101535	102121
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	LLEALQLSLPAEAQNKK	LLEALQLSLPAEAQNKK	2	LLEALQLSLPAEAQNKK2		1340.78	
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	LLEALQLSLPAEAQNKK	LLEALQLSLPAEAQNKK	3	LLEALQLSLPAEAQNKK3	7325.39	16576.8	15438.8
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	LLEAMETCNHSLK	LLEAMETC(UniMod:4)NHSLK	3	LLEAMETC(UniMod:4)NHSLK3	3982.84		4757.92
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	LLEAQIATGGIIDPK	LLEAQIATGGIIDPK	2	LLEAQIATGGIIDPK2	10584.5	4778.88	10488.1
P30427	A0A8I6AHY5;P30427	PLEC_RAT	Plec	Plectin	0	LLEAQIATGGIIDPVHSHR	LLEAQIATGGIIDPVHSHR	3	LLEAQIATGGIIDPVHSHR3	4469.57		
P30427	A0A8I6AHY5;P30427	PLEC_RAT	Plec	Plectin	0	LLEAQIATGGIIDPVHSHR	LLEAQIATGGIIDPVHSHR	4	LLEAQIATGGIIDPVHSHR4	13298.9	3545.36	3036.62
A0A8I6AHY5	A0A8I6AHY5	A0A8I6AHY5_RAT	Eppk1	Epiplakin 1	1	LLEAQIATGGVIDPVHSHR	LLEAQIATGGVIDPVHSHR	4	LLEAQIATGGVIDPVHSHR4	8702.73		
D3ZZL9	D3ZZL9	GCC2_RAT	Gcc2	GRIP and coiled-coil domain-containing protein 2	1	LLEAQILEVQR	LLEAQILEVQR	2	LLEAQILEVQR2		1890.5	2437.16
P70569	P70569	MYO5B_RAT	Myo5b	Unconventional myosin-Vb	1	LLEAQLQAQNLK	LLEAQLQAQNLK	2	LLEAQLQAQNLK2	6540.52	1885.99	6824.95
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LLEAQSHFR	LLEAQSHFR	2	LLEAQSHFR2	170921	131108	126050
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LLEAQSHFRK	LLEAQSHFRK	3	LLEAQSHFRK3	14490.2	13846.8	19519.2
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	LLEASHAFEVSDSGNLIVSGK	LLEASHAFEVSDSGNLIVSGK	3	LLEASHAFEVSDSGNLIVSGK3	7864.81	11483.7	6975.71
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	LLEASTQFQK	LLEASTQFQK	2	LLEASTQFQK2	60731.1	64471.1	70118.5
Q5M871	Q5M871	FAIM3_RAT	Fcmr	Fas apoptotic inhibitory molecule 3	1	LLEASYSHHTR	LLEASYSHHTR	2	LLEASYSHHTR2	1385.15	2939.03	2370.55
Q5M871	Q5M871	FAIM3_RAT	Fcmr	Fas apoptotic inhibitory molecule 3	1	LLEASYSHHTR	LLEASYSHHTR	3	LLEASYSHHTR3	285114	102822	237550
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LLEATELK	LLEATELK	2	LLEATELK2	1.31346e+06	1.37171e+06	1.34492e+06
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	LLEATPTDSCGYFR	LLEATPTDSC(UniMod:4)GYFR	2	LLEATPTDSC(UniMod:4)GYFR2	31365.8	34625.1	33311.9
D4A731	D4A731	D4A731_RAT	Ankib1	RBR-type E3 ubiquitin transferase	1	LLEAWMSNPENCCQR	LLEAWMSNPENC(UniMod:4)C(UniMod:4)QR	3	LLEAWMSNPENC(UniMod:4)C(UniMod:4)QR3	4154.9		
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	LLECPHMNVR	LLEC(UniMod:4)PHMNVR	3	LLEC(UniMod:4)PHMNVR3	24651.6	28422.6	25473.1
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	LLECYFTR	LLEC(UniMod:4)YFTR	2	LLEC(UniMod:4)YFTR2	37515.3	46431.9	28504.4
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	LLEDIAVLHR	LLEDIAVLHR	2	LLEDIAVLHR2	49533.4	45831.1	52104.1
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	LLEDIAVLHR	LLEDIAVLHR	3	LLEDIAVLHR3	220057	212934	225922
Q6MG88	Q6MG88	GPSM3_RAT	Gpsm3	G-protein-signaling modulator 3	1	LLEDKEQLYSTILSHQCQR	LLEDKEQLYSTILSHQC(UniMod:4)QR	3	LLEDKEQLYSTILSHQC(UniMod:4)QR3	31805.7	21239.7	21441.2
Q6MG88	Q6MG88	GPSM3_RAT	Gpsm3	G-protein-signaling modulator 3	1	LLEDKEQLYSTILSHQCQR	LLEDKEQLYSTILSHQC(UniMod:4)QR	4	LLEDKEQLYSTILSHQC(UniMod:4)QR4	90911.8	106402	110398
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	LLEDKNGEVQNLAVK	LLEDKNGEVQNLAVK	3	LLEDKNGEVQNLAVK3	13921.1	14653.8	22520.6
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	LLEDLETSPTK	LLEDLETSPTK	2	LLEDLETSPTK2	28211.6	32497.4	35230.8
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	LLEDVAAVR	LLEDVAAVR	2	LLEDVAAVR2	36974	42936.7	54756.2
P24155	P24155	THOP1_RAT	Thop1	Thimet oligopeptidase	1	LLEEAFNCR	LLEEAFNC(UniMod:4)R	2	LLEEAFNC(UniMod:4)R2	7547.99	7410.09	6838
B4F766	B4F766	DYM_RAT	Dym	Dymeclin	1	LLEEATISVCK	LLEEATISVC(UniMod:4)K	2	LLEEATISVC(UniMod:4)K2	3247.81	4432.83	3409.18
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	LLEEDTPR	LLEEDTPR	2	LLEEDTPR2	87170.5	91640.5	90899.7
A0A0G2K5D7	A0A0G2K5D7;M0RCY0	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	0	LLEEEEK	LLEEEEK	2	LLEEEEK2	227835	193485	236664
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	LLEEERDQR	LLEEERDQR	3	LLEEERDQR3	51327.5	28102.5	64627.2
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	LLEEEVAK	LLEEEVAK	2	LLEEEVAK2	75160.4	86827.8	79524.1
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	LLEEFVNHIQELQIMDER	LLEEFVNHIQELQIMDER	3	LLEEFVNHIQELQIMDER3	6773.39	21563.2	19174.3
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	LLEEGAVPMDSVSPTLR	LLEEGAVPMDSVSPTLR	2	LLEEGAVPMDSVSPTLR2	13318.3	19106	20938.5
D3ZHZ3	D3ZHZ3	D3ZHZ3_RAT	Osbpl3	Oxysterol-binding protein	1	LLEEGNIEEAEVQK	LLEEGNIEEAEVQK	2	LLEEGNIEEAEVQK2	1545.91	4823.55	5132.02
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	LLEEGVLR	LLEEGVLR	2	LLEEGVLR2	130793	176739	175437
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	LLEEHAK	LLEEHAK	1	LLEEHAK1	18559.8	26662.1	15303.7
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	LLEEHAK	LLEEHAK	2	LLEEHAK2	1.25546e+06	1.29603e+06	1.26703e+06
P0C2X9	P0C2X9	AL4A1_RAT	Aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1	LLEEHSR	LLEEHSR	2	LLEEHSR2	38748.2	50158.2	46678.2
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	LLEEICNLGR	LLEEIC(UniMod:4)NLGR	2	LLEEIC(UniMod:4)NLGR2	56438	64667.6	59051.3
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	LLEEIEFLEGAEGVDHPSR	LLEEIEFLEGAEGVDHPSR	3	LLEEIEFLEGAEGVDHPSR3	6381.95	3888.34	
D3ZJY1	D3ZJY1	D3ZJY1_RAT	Mrpl28	39S ribosomal protein L28, mitochondrial	1	LLEEKDPVPLFK	LLEEKDPVPLFK	3	LLEEKDPVPLFK3	2988.02	7125.06	4633.95
Q7M767	A0A8I6A3Q1;A0A8I6AT35;F1M227;Q7M767	UB2V2_RAT	Ube2v2	Ubiquitin-conjugating enzyme E2 variant 2	0	LLEELEEGQK	LLEELEEGQK	2	LLEELEEGQK2	52991.2	48304.3	48737.5
O08836	O08836	IGBP1_RAT	Igbp1	Immunoglobulin-binding protein 1	1	LLEELEVATEPTGSR	LLEELEVATEPTGSR	3	LLEELEVATEPTGSR3	4240.61		
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	LLEELLK	LLEELLK	2	LLEELLK2	123560	128990	107483
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	LLEELLNK	LLEELLNK	2	LLEELLNK2	24393.4	25862.5	19594.2
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	LLEELVR	LLEELVR	2	LLEELVR2	41627.2	39533.7	38015.4
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	LLEEQGIFLR	LLEEQGIFLR	2	LLEEQGIFLR2	40202.5	33080.4	39162.6
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	LLEEQLQR	LLEEQLQR	2	LLEEQLQR2	34027.1	33686.8	27666.6
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	LLEESNMELEER	LLEESNMELEER	2	LLEESNMELEER2	6262.47	5606.78	7711.84
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LLEEYSSDDTR	LLEEYSSDDTR	2	LLEEYSSDDTR2	115072	125610	110567
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LLEEYSSDDTRNVEETTEYLK	LLEEYSSDDTRNVEETTEYLK	3	LLEEYSSDDTRNVEETTEYLK3	10407.5	14911.6	11250.2
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	LLEFELAQLTK	LLEFELAQLTK	2	LLEFELAQLTK2	11569.4	9849.3	8381.42
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	LLEFNQGK	LLEFNQGK	2	LLEFNQGK2	56435.3	47085.6	35397.8
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	LLEFQLALK	LLEFQLALK	2	LLEFQLALK2	37510.4	21955.1	31842.6
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	LLEFVPHHCR	LLEFVPHHC(UniMod:4)R	3	LLEFVPHHC(UniMod:4)R3	35720.6	31331.8	30147.6
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	LLEFYDTTAHFAK	LLEFYDTTAHFAK	3	LLEFYDTTAHFAK3	12995	13312.8	10647.6
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	LLEFYQNYFEIQYPLKK	LLEFYQNYFEIQYPLKK	3	LLEFYQNYFEIQYPLKK3	3308.82	2092.73	1766.03
Q6IFU8	Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	1	LLEGEDAHLTQYK	LLEGEDAHLTQYK	3	LLEGEDAHLTQYK3	19014.2	18236.8	10884.8
Q6P6Q2	Q6IG02;A0A0G2JVA8;Q6IFZ5;Q6IG00;Q6IG03;Q6P6Q2;P16884;Q6IG05	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	0	LLEGEECR	LLEGEEC(UniMod:4)R	2	LLEGEEC(UniMod:4)R2	622475	341356	410390
P48679	P48679;P70615;D3ZLC1	LMNA_RAT	Lmna	Prelamin-A/C	0	LLEGEEER	LLEGEEER	2	LLEGEEER2	110307	104798	112837
P31000	Q10758;P48675;P31000;Q6IG12;P21807	VIME_RAT	Vim	Vimentin	0	LLEGEESR	LLEGEESR	2	LLEGEESR2	103729	35068.3	41877.8
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	LLEGIGLESLDSPAATK	LLEGIGLESLDSPAATK	2	LLEGIGLESLDSPAATK2	20049.8	15658	27753.2
D3ZXY2	D3ZXY2	D3ZXY2_RAT	Pdzd8	PDZ domain containing 8	1	LLEGLSLR	LLEGLSLR	2	LLEGLSLR2	32699.3	23327.9	
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	LLEHVEMHGLYTEGLYR	LLEHVEMHGLYTEGLYR	3	LLEHVEMHGLYTEGLYR3	7148.9	8940.64	7506.36
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	LLEHVEMHGLYTEGLYR	LLEHVEMHGLYTEGLYR	4	LLEHVEMHGLYTEGLYR4	14966.1	32886.2	28314.5
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	LLEHVGQLDK	LLEHVGQLDK	3	LLEHVGQLDK3	3391.3	6884	4064.09
P58751	P58751	RELN_RAT	Reln	Reelin	1	LLEHYSYLNYHEPR	LLEHYSYLNYHEPR	2	LLEHYSYLNYHEPR2	3506.94	7953.36	8839.7
P58751	P58751	RELN_RAT	Reln	Reelin	1	LLEHYSYLNYHEPR	LLEHYSYLNYHEPR	3	LLEHYSYLNYHEPR3	10791.5	12905.4	13350
P58751	P58751	RELN_RAT	Reln	Reelin	1	LLEHYSYLNYHEPR	LLEHYSYLNYHEPR	4	LLEHYSYLNYHEPR4	113761	139028	125057
A0A0G2JTB2	A0A0G2JTB2	A0A0G2JTB2_RAT	Gbe1	1,4-alpha-glucan branching enzyme	1	LLEIDPYLKPYAADFQR	LLEIDPYLKPYAADFQR	3	LLEIDPYLKPYAADFQR3	7616.3	11618.2	14707
D4A4L5	D4A4L5;A0A8I5ZSL2	D4A4L5_RAT	Isca2	Iron-sulfur cluster assembly 2	0	LLEITEGSEFLR	LLEITEGSEFLR	2	LLEITEGSEFLR2	5243.77		1914.45
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	LLEIVSYK	LLEIVSYK	2	LLEIVSYK2	14184.2	19597.3	21511.2
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	LLEKESGIDLADSNQR	LLEKESGIDLADSNQR	3	LLEKESGIDLADSNQR3		8938.98	12973
F7FL28	F7FL28	F7FL28_RAT	Napsa	Napsin A aspartic peptidase	1	LLEKPVFSFYLNR	LLEKPVFSFYLNR	3	LLEKPVFSFYLNR3	13285.8	14814	17009.6
F1LVX1	F1LVX1	F1LVX1_RAT	Dnajc1	DnaJ heat shock protein family (Hsp40) member C1	1	LLELALQQYPK	LLELALQQYPK	2	LLELALQQYPK2	2889.69	9538.91	6976.95
P54001	P54001	P4HA1_RAT	P4ha1	Prolyl 4-hydroxylase subunit alpha-1	1	LLELDPEHQR	LLELDPEHQR	2	LLELDPEHQR2	6355.44	3059.47	5420.23
P54001	P54001	P4HA1_RAT	P4ha1	Prolyl 4-hydroxylase subunit alpha-1	1	LLELDPEHQR	LLELDPEHQR	3	LLELDPEHQR3	54280.8	51757.9	63947.5
Q9WTT7	Q9WTT7	5MP1_RAT	Bzw2	eIF5-mimic protein 1	1	LLELFPVNR	LLELFPVNR	2	LLELFPVNR2	45274.9	40200.1	22775.2
Q4V8K5	Q4V8K5	BROX_RAT	Brox	BRO1 domain-containing protein BROX	1	LLELFTDLSCNPETMK	LLELFTDLSC(UniMod:4)NPETMK	2	LLELFTDLSC(UniMod:4)NPETMK2	7400.27	7070.14	5852.54
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	LLELGPKPEVAQQTR	LLELGPKPEVAQQTR	2	LLELGPKPEVAQQTR2	6901.71	3889.92	
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	LLELGPKPEVAQQTR	LLELGPKPEVAQQTR	3	LLELGPKPEVAQQTR3	639130	602615	561228
F7EUU4	F7EUU4	F7EUU4_RAT	Cops5	COP9 signalosome subunit 5	1	LLELLWNK	LLELLWNK	2	LLELLWNK2	118568	94143	97935.5
Q63470	Q63470	DYR1A_RAT	Dyrk1a	Dual specificity tyrosine-phosphorylation-regulated kinase 1A	1	LLELMNK	LLELMNK	2	LLELMNK2	22956.5	25400.4	25629.6
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	LLELQAGK	LLELQAGK	2	LLELQAGK2	616925	549888	665988
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	LLELQAGKK	LLELQAGKK	2	LLELQAGKK2	28131.6	40105.3	23673.6
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	LLELQELVLR	LLELQELVLR	2	LLELQELVLR2	67206.6	57153.2	87074.4
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	LLELQSIGTNNFLR	LLELQSIGTNNFLR	2	LLELQSIGTNNFLR2	67950.9	62195.5	73490.8
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	LLELQYFISR	LLELQYFISR	2	LLELQYFISR2	43985	27788	31920
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	LLEMDGHNQDHLK	LLEMDGHNQDHLK	3	LLEMDGHNQDHLK3	44942.3	29372.1	36706.6
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	LLEMDGHNQDHLK	LLEMDGHNQDHLK	4	LLEMDGHNQDHLK4	34177.8	31197.3	26808.9
Q811U3	Q8K3M6;Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	0	LLEMLQSK	LLEMLQSK	2	LLEMLQSK2	32403.4	28979.7	24537.7
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	LLEMMEEVQSLQEK	LLEMMEEVQSLQEK	2	LLEMMEEVQSLQEK2	5790.71	10114.4	7101.77
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	LLEMMEEVQSLQEK	LLEMMEEVQSLQEK	3	LLEMMEEVQSLQEK3	9991.4	9098.44	11874
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	LLEMNLMHAPQVADAILGNQMFTHYDR	LLEMNLMHAPQVADAILGNQMFTHYDR	4	LLEMNLMHAPQVADAILGNQMFTHYDR4	357384	366817	325217
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	LLEMTQK	LLEMTQK	2	LLEMTQK2		20136.9	25463.1
A0A8I5ZS17	A0A8I5ZS17	A0A8I5ZS17_RAT	Snx25	Sorting nexin 25	1	LLENIPDTLQSLVGQQNAR	LLENIPDTLQSLVGQQNAR	3	LLENIPDTLQSLVGQQNAR3	11904.1	6543.94	11770.3
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	LLENISPADVGGMEETR	LLENISPADVGGMEETR	2	LLENISPADVGGMEETR2	20850.9	14859.2	18002.6
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	LLENMQSDLR	LLENMQSDLR	2	LLENMQSDLR2	21444	34742	31579.4
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	LLENMTEVVR	LLENMTEVVR	2	LLENMTEVVR2	83711.6	81313.4	73287.8
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	LLENMTEVVRK	LLENMTEVVRK	3	LLENMTEVVRK3	11967.9		22147.6
D3ZE05	D3ZE05	D3ZE05_RAT	Cilp2	Cartilage intermediate layer protein 2	1	LLENPASALGDIR	LLENPASALGDIR	2	LLENPASALGDIR2	41032.4	52502.9	28159.4
D3ZE05	D3ZE05	D3ZE05_RAT	Cilp2	Cartilage intermediate layer protein 2	1	LLENPASALGDIRR	LLENPASALGDIRR	3	LLENPASALGDIRR3	50453.7	56508	55434.3
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	LLEPADMVLLSVPDK	LLEPADMVLLSVPDK	2	LLEPADMVLLSVPDK2	118864	104766	109477
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	LLEPADMVLLSVPDK	LLEPADMVLLSVPDK	3	LLEPADMVLLSVPDK3	9459.51	4644.98	9596.46
Q9JKW1	Q9JKW1	TIM22_RAT	Timm22	Mitochondrial import inner membrane translocase subunit Tim22	1	LLEPGSLGGIPSPAK	LLEPGSLGGIPSPAK	2	LLEPGSLGGIPSPAK2	5295.19	9007.43	6248.14
P62250	A0A8I5XVG9;P62250;M0R4I3;A0A8I5YCD9;A0A8I6AIA7	RS16_RAT	Rps16	Small ribosomal subunit protein uS9	0	LLEPVLLLGK	LLEPVLLLGK	2	LLEPVLLLGK2	59751.9	43616.7	64909.5
Q793F9	Q793F9	VPS4A_RAT	Vps4a	Vacuolar protein sorting-associated protein 4A	1	LLEPVVCMSDMLR	LLEPVVC(UniMod:4)MSDMLR	2	LLEPVVC(UniMod:4)MSDMLR2	37122.2	32412.5	27486.3
Q793F9	Q793F9	VPS4A_RAT	Vps4a	Vacuolar protein sorting-associated protein 4A	1	LLEPVVCMSDMLR	LLEPVVC(UniMod:4)MSDMLR	3	LLEPVVC(UniMod:4)MSDMLR3	2136.43	2040.97	1780.54
Q7TQ20	Q7TQ20	DNJC2_RAT	Dnajc2	DnaJ homolog subfamily C member 2	1	LLEQALK	LLEQALK	2	LLEQALK2	14159	8054.01	5780.74
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	LLEQLQEMGQEK	LLEQLQEMGQEK	2	LLEQLQEMGQEK2	23833.6	20722.2	9886.79
D3ZZJ7	D3ZZJ7	D3ZZJ7_RAT	Dcp1b	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	LLEQLQGAPAAVHK	LLEQLQGAPAAVHK	3	LLEQLQGAPAAVHK3	9263.42	13201.7	15374.6
Q5U2R7	Q5U2R7	MESD_RAT	Mesd	LRP chaperone MESD	1	LLEQWEK	LLEQWEK	2	LLEQWEK2	20172.2	17264.8	19626.4
Q5U2R7	Q5U2R7	MESD_RAT	Mesd	LRP chaperone MESD	1	LLEQWEKDDDIEEGDLPEHK	LLEQWEKDDDIEEGDLPEHK	3	LLEQWEKDDDIEEGDLPEHK3	8569.59	3458.55	3367.74
Q5U2R7	Q5U2R7	MESD_RAT	Mesd	LRP chaperone MESD	1	LLEQWEKDDDIEEGDLPEHK	LLEQWEKDDDIEEGDLPEHK	4	LLEQWEKDDDIEEGDLPEHK4	6017.9	5946.93	4094.5
Q8R4A1	Q8R4A1	ERO1A_RAT	Ero1a	ERO1-like protein alpha	1	LLESDYFR	LLESDYFR	2	LLESDYFR2	90683.3	82548.1	96839.9
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	LLESEAVNENLR	LLESEAVNENLR	2	LLESEAVNENLR2	13777.8	9560.65	7845.18
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	LLESEAVNENLRK	LLESEAVNENLRK	3	LLESEAVNENLRK3	20504.4	10563.7	19897
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	LLESGDLSMNSIK	LLESGDLSMNSIK	2	LLESGDLSMNSIK2	67371.1	75629.6	61751
F1LWD0	F1LWD0	F1LWD0_RAT	AABR07065782.1	Ig-like domain-containing protein	1	LLESGGGLVQPGGSLR	LLESGGGLVQPGGSLR	2	LLESGGGLVQPGGSLR2	589781	581011	553301
F1LWD0	F1LWD0	F1LWD0_RAT	AABR07065782.1	Ig-like domain-containing protein	1	LLESGGGLVQPGGSLR	LLESGGGLVQPGGSLR	3	LLESGGGLVQPGGSLR3	88542.8	77754.4	67973.1
A0A0G2K828	A0A0G2K828	A0A0G2K828_RAT	ENSRNOG00000066380	Ig-like domain-containing protein	1	LLESGGGLVQPGGSMR	LLESGGGLVQPGGSMR	2	LLESGGGLVQPGGSMR2	674332	573824	561132
A0A0G2K828	A0A0G2K828	A0A0G2K828_RAT	ENSRNOG00000066380	Ig-like domain-containing protein	1	LLESGGGLVQPGGSMR	LLESGGGLVQPGGSMR	3	LLESGGGLVQPGGSMR3	46518.7	37624.5	42624.6
F1M0U4	F1M0U4	F1M0U4_RAT	ENSRNOG00000066892	Ig-like domain-containing protein	1	LLESGGGLVQSGASLR	LLESGGGLVQSGASLR	2	LLESGGGLVQSGASLR2	377693	453579	391408
F1M0U4	F1M0U4	F1M0U4_RAT	ENSRNOG00000066892	Ig-like domain-containing protein	1	LLESGGGLVQSGASLR	LLESGGGLVQSGASLR	3	LLESGGGLVQSGASLR3	1.69099e+06	2.65289e+06	2.15986e+06
B2GV55	B2GV55	B2GV55_RAT	Ube2q1	Ubiquitin conjugating enzyme E2 Q1	1	LLESIFHR	LLESIFHR	2	LLESIFHR2	24361.8	22292.8	10371
Q6TUD4	Q6TUD4	YIPF3_RAT	Yipf3	Protein YIPF3	1	LLESMIPIK	LLESMIPIK	2	LLESMIPIK2	72750.8	69576.1	64276.2
A0A0G2K1N9	A0A0G2K1N9	A0A0G2K1N9_RAT	Selenoo	Selenoprotein O	1	LLESPYHSEEEATGPEAVAR	LLESPYHSEEEATGPEAVAR	3	LLESPYHSEEEATGPEAVAR3	6016.97	5745.57	6524.04
Q4V8E4	Q4V8E4	CFA36_RAT	Cfap36	Cilia- and flagella-associated protein 36	1	LLESYLK	LLESYLK	2	LLESYLK2	26793.2	27532.2	21185.3
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	LLETAEAGSK	LLETAEAGSK	2	LLETAEAGSK2	260229	214356	269736
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	LLETCSIALVGK	LLETC(UniMod:4)SIALVGK	2	LLETC(UniMod:4)SIALVGK2	96504.6	91205.6	82404.9
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	LLETGLVNMHR	LLETGLVNMHR	3	LLETGLVNMHR3	10282.8	16145.7	13607.3
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	LLETHIHNQGLAAIEK	LLETHIHNQGLAAIEK	3	LLETHIHNQGLAAIEK3	37023.4	41916.3	39330
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	LLETHIHNQGLAAIEK	LLETHIHNQGLAAIEK	4	LLETHIHNQGLAAIEK4	32315.2	31994.2	28056.5
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	LLETIDQLYLEYAK	LLETIDQLYLEYAK	2	LLETIDQLYLEYAK2	376444	443965	302381
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	LLETIDQLYLEYAK	LLETIDQLYLEYAK	3	LLETIDQLYLEYAK3	627720	807511	728564
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	LLETIDQLYLEYAKR	LLETIDQLYLEYAKR	3	LLETIDQLYLEYAKR3	8293.41	17724.9	15724.4
Q05030	Q05030	PGFRB_RAT	Pdgfrb	Platelet-derived growth factor receptor beta	1	LLETLEDVQIAELHR	LLETLEDVQIAELHR	3	LLETLEDVQIAELHR3	23940.8	14844.9	20813.6
Q64232	Q64232	TECR_RAT	Tecr	Very-long-chain enoyl-CoA reductase	1	LLETLFVHR	LLETLFVHR	2	LLETLFVHR2	24131.2	22648.3	12017.7
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	LLETPSTLHDQK	LLETPSTLHDQK	3	LLETPSTLHDQK3	21192.7	18214.9	33947.4
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	LLETQEQEIEDGR	LLETQEQEIEDGR	2	LLETQEQEIEDGR2	4628.53	1463.46	
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	LLETTDRPDGHQNNLR	LLETTDRPDGHQNNLR	3	LLETTDRPDGHQNNLR3	33021.6	22528.6	44002
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	LLETTDRPDGHQNNLR	LLETTDRPDGHQNNLR	4	LLETTDRPDGHQNNLR4	248356	281838	263621
Q4KLK8	Q4KLK8	PXDC1_RAT	Pxdc1	PX domain-containing protein 1	1	LLETVISMPCK	LLETVISMPC(UniMod:4)K	2	LLETVISMPC(UniMod:4)K2	1945.86	5507.94	7299.45
P00406	P00406	COX2_RAT	Mtco2	Cytochrome c oxidase subunit 2	1	LLEVDNR	LLEVDNR	2	LLEVDNR2	1.20446e+06	1.23735e+06	1.30342e+06
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	LLEVEHPAAK	LLEVEHPAAK	2	LLEVEHPAAK2	76899	58178	36415.2
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	LLEVFTEHWR	LLEVFTEHWR	3	LLEVFTEHWR3	8930.13	6313.9	8710.85
D4AE96	D4AE96;A0A0G2K6J6	D4AE96_RAT	Ipo7	Importin 7	0	LLEVIILQCK	LLEVIILQC(UniMod:4)K	2	LLEVIILQC(UniMod:4)K2	32863.2	32710.4	25874.7
A0A8I6AHY5	A0A8I6AHY5	A0A8I6AHY5_RAT	Eppk1	Epiplakin 1	1	LLEVITSTVEDTEK	LLEVITSTVEDTEK	2	LLEVITSTVEDTEK2		1784.3	
Q6AY97	Q6AY97	CCD91_RAT	Ccdc91	Coiled-coil domain-containing protein 91	1	LLEVLDTEKELLK	LLEVLDTEKELLK	3	LLEVLDTEKELLK3	6262.87	9715.92	
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LLEVLSGEMLPR	LLEVLSGEMLPR	2	LLEVLSGEMLPR2	18279.3	16592.6	15025.4
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LLEVLSGEMLPRPTK	LLEVLSGEMLPRPTK	3	LLEVLSGEMLPRPTK3	86249	96477	84751.3
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LLEVLSGER	LLEVLSGER	2	LLEVLSGER2	924398	971999	960465
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LLEVLSGERLPKPTK	LLEVLSGERLPKPTK	4	LLEVLSGERLPKPTK4	9353.06	25040.9	17741.1
D3ZWS0	D3ZWS0	D3ZWS0_RAT	Scrib	Scribble planar cell polarity protein	1	LLEVNQQSLLGLTHAEAVQLLR	LLEVNQQSLLGLTHAEAVQLLR	3	LLEVNQQSLLGLTHAEAVQLLR3	6593.05	2559.94	7225.58
P62138	P62138	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	1	LLEVQGSR	LLEVQGSR	2	LLEVQGSR2	38879.6	19657.5	29408.2
P62138	P62138	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	1	LLEVQGSRPGK	LLEVQGSRPGK	2	LLEVQGSRPGK2	21098.7	13496.4	9969.05
P62138	P62138	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	1	LLEVQGSRPGK	LLEVQGSRPGK	3	LLEVQGSRPGK3	275787	205435	215190
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	LLEVQSQVEELQK	LLEVQSQVEELQK	2	LLEVQSQVEELQK2	32988.1	27753.3	33519.7
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	LLEVQSQVEELQK	LLEVQSQVEELQK	3	LLEVQSQVEELQK3	7456.03	587.018	8212.01
A0A8I5ZQ24	A0A8I5ZQ24	A0A8I5ZQ24_RAT	Atp6v1h	V-type proton ATPase subunit H	1	LLEVSDDPQVLAVAAHDVGEYVR	LLEVSDDPQVLAVAAHDVGEYVR	3	LLEVSDDPQVLAVAAHDVGEYVR3	10770.1	8225.17	18437.7
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	LLEVTADLAER	LLEVTADLAER	2	LLEVTADLAER2	63566.2	51342.2	50932.8
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	LLEVVQPCLQAAK	LLEVVQPC(UniMod:4)LQAAK	2	LLEVVQPC(UniMod:4)LQAAK2	7164.63	5941.89	5971.03
G3V784	G3V784	G3V784_RAT	Adpgk	ADP-dependent glucokinase	1	LLEVVTSISDIPTGIPVHLELASMTNR	LLEVVTSISDIPTGIPVHLELASMTNR	3	LLEVVTSISDIPTGIPVHLELASMTNR3	4656.52	3354.36	6247.22
F1M386	F1M386	RPGF2_RAT	Rapgef2	Rap guanine nucleotide exchange factor 2	1	LLEWFNDPSLR	LLEWFNDPSLR	2	LLEWFNDPSLR2	3523.95	2499.79	4158.24
Q7TP48	Q7TP48	APMAP_RAT	Apmap	Adipocyte plasma membrane-associated protein	1	LLEYDTVTK	LLEYDTVTK	2	LLEYDTVTK2	98188.7	95105.2	85020.5
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	LLEYEPR	LLEYEPR	2	LLEYEPR2	29647.6	31112.6	29658.7
P18266	P18266	GSK3B_RAT	Gsk3b	Glycogen synthase kinase-3 beta	1	LLEYTPTAR	LLEYTPTAR	2	LLEYTPTAR2	38920.8	36290.2	28003.5
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	LLFAYSAIDPR	LLFAYSAIDPR	2	LLFAYSAIDPR2	2507.02	1355.41	8789.51
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	LLFCTGK	LLFC(UniMod:4)TGK	2	LLFC(UniMod:4)TGK2	207029	177448	197198
D3Z841	D3Z841	D3Z841_RAT	Btnl10	Butyrophilin like 10	1	LLFDLDVSPNSR	LLFDLDVSPNSR	2	LLFDLDVSPNSR2			2687.87
Q566R0	Q566R0	THEM4_RAT	Them4	Acyl-coenzyme A thioesterase THEM4	1	LLFDQFMK	LLFDQFMK	2	LLFDQFMK2	12288.6	7808.07	10376.1
P11980	P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	1	LLFEELAR	LLFEELAR	2	LLFEELAR2	31212.3	31440.4	34112
F7FFW7	F7FFW7	F7FFW7_RAT	Atp6v0d1	ATPase H+ transporting V0 subunit D1	1	LLFEGAGSNPGDK	LLFEGAGSNPGDK	2	LLFEGAGSNPGDK2	129482	132092	127729
Q5XIK7	Q6E0V2;Q5XIK7	KATL1_RAT	Katnal1	Katanin p60 ATPase-containing subunit A-like 1	0	LLFEMAR	LLFEMAR	2	LLFEMAR2	12202.4	6790.95	7167.4
A0A8I5ZLR7	A0A8I5ZLR7	A0A8I5ZLR7_RAT	Tsr2	Pre-rRNA-processing protein TSR2 homolog	1	LLFGAGVR	LLFGAGVR	2	LLFGAGVR2	30204	36955.6	21200.5
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	LLFLGSDGK	LLFLGSDGK	2	LLFLGSDGK2	18398.1	19079.8	20503.3
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	LLFLLGADGGCITR	LLFLLGADGGC(UniMod:4)ITR	2	LLFLLGADGGC(UniMod:4)ITR2	106213	107671	127841
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	LLFLLTALR	LLFLLTALR	2	LLFLLTALR2	4808.03	6920.74	6063.8
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	LLFPSSFLPSFPSR	LLFPSSFLPSFPSR	2	LLFPSSFLPSFPSR2		14174.4	10763.8
A0A8I6ATH0	A0A8I6ATH0	A0A8I6ATH0_RAT	Braf	non-specific serine/threonine protein kinase	1	LLFQGFR	LLFQGFR	2	LLFQGFR2	45941.7	46149.8	41486.9
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LLFQMDSSATAYGSTISK	LLFQMDSSATAYGSTISK	2	LLFQMDSSATAYGSTISK2	227526	229103	259146
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LLFQMDSSATAYGSTISK	LLFQMDSSATAYGSTISK	3	LLFQMDSSATAYGSTISK3	106694	110871	126257
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LLFQMDSSATAYGSTISKR	LLFQMDSSATAYGSTISKR	3	LLFQMDSSATAYGSTISKR3	22101.3	32824.6	27167.9
A0A8I6A3B1	A0A8I6A3B1	A0A8I6A3B1_RAT	Ncoa4	Nuclear receptor coactivator 4	1	LLFQVFR	LLFQVFR	2	LLFQVFR2	10162.6	7612.88	10501
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LLFSGGHWDGSLR	LLFSGGHWDGSLR	2	LLFSGGHWDGSLR2	15244.1	9848.69	22369.7
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LLFSGGHWDGSLR	LLFSGGHWDGSLR	3	LLFSGGHWDGSLR3	69313.5	70946.6	62559.1
D3ZZ46	D3ZZ46	D3ZZ46_RAT	Cln6	CLN6, transmembrane ER protein	1	LLFSGYQHHLSVR	LLFSGYQHHLSVR	4	LLFSGYQHHLSVR4	16818.3	18648.6	5333.21
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	LLFSHDLVSGR	LLFSHDLVSGR	2	LLFSHDLVSGR2	48916.2	55193.6	27347.6
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	LLFSHDLVSGR	LLFSHDLVSGR	3	LLFSHDLVSGR3	1.31757e+06	1.32369e+06	1.38759e+06
Q5XI59	Q5XI59	RNF10_RAT	Rnf10	E3 ubiquitin-protein ligase RNF10	1	LLFSTSVVHTK	LLFSTSVVHTK	3	LLFSTSVVHTK3			2098.2
A0A8I6AEI3	A0A8I6AEI3	A0A8I6AEI3_RAT	Wwox	WW domain-containing oxidoreductase	1	LLFTLAR	LLFTLAR	2	LLFTLAR2	14196.3	16940.5	17375.8
A0A0G2JWH3	A0A0G2JWH3	A0A0G2JWH3_RAT	Ncapd2	Condensin complex subunit 1	1	LLFTMLEK	LLFTMLEK	2	LLFTMLEK2			3897.16
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	LLFVLHGLER	LLFVLHGLER	2	LLFVLHGLER2	25036.4	14783.6	35302
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	LLFVLHGLER	LLFVLHGLER	3	LLFVLHGLER3	281841	253954	242169
Q9R0C5	Q9R0C5	GALT7_RAT	Galnt7	N-acetylgalactosaminyltransferase 7	1	LLFVPCSR	LLFVPC(UniMod:4)SR	2	LLFVPC(UniMod:4)SR2	4614.25	10984.9	6443.67
Q99NA5	Q99NA5	IDH3A_RAT	Idh3a	Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial	1	LLGAFHNTK	LLGAFHNTK	2	LLGAFHNTK2	18229.5	19109.4	6781.04
Q9EQL9	Q9EQL9	SHRPN_RAT	Sharpin	Sharpin	1	LLGAGHEDEAQLR	LLGAGHEDEAQLR	3	LLGAGHEDEAQLR3	10798.7	8159.44	14699.7
P14841	P14841	CYTC_RAT	Cst3	Cystatin-C	1	LLGAPQEADASEEGVQR	LLGAPQEADASEEGVQR	2	LLGAPQEADASEEGVQR2	86039.5	87266.8	82380.6
P14841	P14841	CYTC_RAT	Cst3	Cystatin-C	1	LLGAPQEADASEEGVQR	LLGAPQEADASEEGVQR	3	LLGAPQEADASEEGVQR3	2231.26	5985.68	14853.9
D4A020	D4A020	D4A020_RAT	Med14	Mediator of RNA polymerase II transcription subunit 14	1	LLGAPTHILRDCVHIMK	LLGAPTHILRDC(UniMod:4)VHIMK	3	LLGAPTHILRDC(UniMod:4)VHIMK3		3499.18	1351.69
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	LLGDMWQR	LLGDMWQR	2	LLGDMWQR2	46262	44221.2	45175.4
Q5BJM5	Q5BJM5	PKHO1_RAT	Plekho1	Pleckstrin homology domain-containing family O member 1	1	LLGEASSNWSQAK	LLGEASSNWSQAK	2	LLGEASSNWSQAK2	8009.09	7608.41	10404.6
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	LLGECSGSIDSVR	LLGEC(UniMod:4)SGSIDSVR	2	LLGEC(UniMod:4)SGSIDSVR2	1975.86		2359.86
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	LLGEIAQGNENYAGIAAR	LLGEIAQGNENYAGIAAR	2	LLGEIAQGNENYAGIAAR2	884699	839644	845012
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	LLGEIAQGNENYAGIAAR	LLGEIAQGNENYAGIAAR	3	LLGEIAQGNENYAGIAAR3	996584	1.13746e+06	1.12978e+06
D4ADQ1	D4ADQ1	D4ADQ1_RAT	Rrm2b	Ribonucleotide reductase regulatory TP53 inducible subunit M2B	1	LLGELGFSK	LLGELGFSK	2	LLGELGFSK2	35885.4	30066.2	32899.3
Q5XIJ7	Q5XIJ7	Q5XIJ7_RAT	Cab39l	Calcium binding protein 39-like	1	LLGELILDR	LLGELILDR	2	LLGELILDR2	74821	79796	72168
Q9EQS0	Q9EQS0	TALDO_RAT	Taldo1	Transaldolase	1	LLGELLK	LLGELLK	2	LLGELLK2	32344.5	33246.3	24434.4
A0A0G2JZH0	A0A0G2JZH0	A0A0G2JZH0_RAT	Cab39	Calcium binding protein 39	1	LLGELLLDR	LLGELLLDR	2	LLGELLLDR2	74821	79796	72168
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	LLGFGSALLDNVDPNPENFVGAGIIQTK	LLGFGSALLDNVDPNPENFVGAGIIQTK	3	LLGFGSALLDNVDPNPENFVGAGIIQTK3	11305.3	7391.19	11514
P62909	D3ZVH2;P62909	RS3_RAT	Rps3	Small ribosomal subunit protein uS3	0	LLGGLAVR	LLGGLAVR	2	LLGGLAVR2	46810	41305.2	41410.3
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	LLGGQAGLGR	LLGGQAGLGR	2	LLGGQAGLGR2	595770	540452	510380
Q498D9	Q498D9	GIPC2_RAT	Gipc2	PDZ domain-containing protein GIPC2	1	LLGGQLGLEDFIFAHVK	LLGGQLGLEDFIFAHVK	3	LLGGQLGLEDFIFAHVK3	23747.7	7792.24	17169.3
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	LLGGQTSYQSAGDPK	LLGGQTSYQSAGDPK	2	LLGGQTSYQSAGDPK2	31161.1	23592.7	23904.3
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	LLGHEVEDVVIK	LLGHEVEDVVIK	2	LLGHEVEDVVIK2		4618.36	
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	LLGHEVEDVVIK	LLGHEVEDVVIK	3	LLGHEVEDVVIK3	47667.2	48645.2	53009
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	LLGHQQSDMELEIQQK	LLGHQQSDMELEIQQK	3	LLGHQQSDMELEIQQK3	12104.5	11594.6	13479.5
P50503	P50503	F10A1_RAT	St13	Hsc70-interacting protein	1	LLGHWEEAAR	LLGHWEEAAR	2	LLGHWEEAAR2	39507.9	50721.2	34692.7
P50503	P50503	F10A1_RAT	St13	Hsc70-interacting protein	1	LLGHWEEAAR	LLGHWEEAAR	3	LLGHWEEAAR3	525613	559686	524498
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	LLGLAELLR	LLGLAELLR	2	LLGLAELLR2	26681	25611.1	36012.5
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	LLGLDEQLR	LLGLDEQLR	2	LLGLDEQLR2	56960.6	51019.8	51198.2
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	LLGLLLPLLAR	LLGLLLPLLAR	2	LLGLLLPLLAR2	12121.1		
O88483	O88483	PDP1_RAT	Pdp1	[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial	1	LLGLLMPFR	LLGLLMPFR	2	LLGLLMPFR2	5451.17		
D3ZL11	D3ZL11	D3ZL11_RAT	Rbsn	Rabenosyn, RAB effector	1	LLGLMSLPTK	LLGLMSLPTK	2	LLGLMSLPTK2	13559.6	18021.9	9253.37
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	LLGLTLVGLVLALYK	LLGLTLVGLVLALYK	2	LLGLTLVGLVLALYK2	46901.2	360415	275532
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	LLGLTLVGLVLALYK	LLGLTLVGLVLALYK	3	LLGLTLVGLVLALYK3	152532	29255.1	6538.02
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	LLGLTLVGLVLALYKNHR	LLGLTLVGLVLALYKNHR	3	LLGLTLVGLVLALYKNHR3			4938.01
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	LLGLTLVGLVLALYKNHR	LLGLTLVGLVLALYKNHR	4	LLGLTLVGLVLALYKNHR4	821121	8511.86	7419.09
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	LLGLTLVGLVLALYKNHRSSYQTR	LLGLTLVGLVLALYKNHRSSYQTR	4	LLGLTLVGLVLALYKNHRSSYQTR4	16026.9	16704.6	12705.1
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	LLGLWPATQENSSAR	LLGLWPATQENSSAR	2	LLGLWPATQENSSAR2	15758.7	20256.5	17832.1
Q6QI44	Q6QI44	NAA25_RAT	Naa25	N-alpha-acetyltransferase 25, NatB auxiliary subunit	1	LLGLYHSMDK	LLGLYHSMDK	3	LLGLYHSMDK3	4353.06	5409.32	
B1WC06	B1WC06	B1WC06_RAT	Mon1a	Vacuolar fusion protein MON1 homolog	1	LLGLYQYLHSR	LLGLYQYLHSR	3	LLGLYQYLHSR3	4965.7	3549.92	4220.02
Q6AYB5	Q6AYB5	SRP54_RAT	Srp54	Signal recognition particle subunit SRP54	1	LLGMGDIEGLIDK	LLGMGDIEGLIDK	2	LLGMGDIEGLIDK2	26097.3	23537.7	23739.4
Q6AYB5	Q6AYB5	SRP54_RAT	Srp54	Signal recognition particle subunit SRP54	1	LLGMGDIEGLIDKVNELK	LLGMGDIEGLIDKVNELK	3	LLGMGDIEGLIDKVNELK3	8842.82	1525.85	
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	LLGMSFMNR	LLGMSFMNR	2	LLGMSFMNR2	74061.3	54854.4	62322.9
P02091	P11517;P02091	HBB1_RAT	Hbb	Hemoglobin subunit beta-1	0	LLGNMIVIVLGHHLGK	LLGNMIVIVLGHHLGK	2	LLGNMIVIVLGHHLGK2	39971.4	22047.2	13579.5
P02091	P11517;P02091	HBB1_RAT	Hbb	Hemoglobin subunit beta-1	0	LLGNMIVIVLGHHLGK	LLGNMIVIVLGHHLGK	3	LLGNMIVIVLGHHLGK3	92428.5	90187.4	78194.7
P02091	P11517;P02091	HBB1_RAT	Hbb	Hemoglobin subunit beta-1	0	LLGNMIVIVLGHHLGK	LLGNMIVIVLGHHLGK	4	LLGNMIVIVLGHHLGK4	374075	325556	244554
Q6MGB5	Q6MGB5	DHB8_RAT	Hsd17b8	(3R)-3-hydroxyacyl-CoA dehydrogenase	1	LLGNPGSEDREPR	LLGNPGSEDREPR	3	LLGNPGSEDREPR3	30607.4	18118	28978.8
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	LLGNQATFSPIVTVEPR	LLGNQATFSPIVTVEPR	2	LLGNQATFSPIVTVEPR2	7179.22		3685
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	LLGNTFVALSDLR	LLGNTFVALSDLR	2	LLGNTFVALSDLR2	112412	63706.5	90184.4
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	LLGNTFVALSDLR	LLGNTFVALSDLR	3	LLGNTFVALSDLR3	7824.33	8010	10684.5
A0A0G2K8I5	A0A0G2K8I5	A0A0G2K8I5_RAT	Pcdh19	Protocadherin 19	1	LLGNVPFR	LLGNVPFR	2	LLGNVPFR2	11741.1		8806.85
P12368	P12368	KAP2_RAT	Prkar2a	cAMP-dependent protein kinase type II-alpha regulatory subunit	1	LLGPCMDIMK	LLGPC(UniMod:4)MDIMK	2	LLGPC(UniMod:4)MDIMK2	31503.9	18234	18210.3
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	LLGPCMEIMK	LLGPC(UniMod:4)MEIMK	2	LLGPC(UniMod:4)MEIMK2	973467	979781	940322
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	LLGPCMEIMKR	LLGPC(UniMod:4)MEIMKR	3	LLGPC(UniMod:4)MEIMKR3	27705.2	45333.8	43132.3
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	LLGPDAAINLADPDGALAK	LLGPDAAINLADPDGALAK	2	LLGPDAAINLADPDGALAK2	171384	170182	184793
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	LLGPDAAINLADPDGALAK	LLGPDAAINLADPDGALAK	3	LLGPDAAINLADPDGALAK3	55096.4	50020.1	61864.2
D3ZZL3	D3ZZL3	D3ZZL3_RAT	Naglu	N-acetyl-alpha-glucosaminidase	1	LLGPGPAADFLVSVER	LLGPGPAADFLVSVER	2	LLGPGPAADFLVSVER2	39809.4	27043.8	53566.9
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	LLGPGVNYSGCQITWAK	LLGPGVNYSGC(UniMod:4)QITWAK	2	LLGPGVNYSGC(UniMod:4)QITWAK2	13531.3	16243.1	15846.2
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	LLGPGVNYSGCQITWAK	LLGPGVNYSGC(UniMod:4)QITWAK	3	LLGPGVNYSGC(UniMod:4)QITWAK3	1904.77	4906.8	3108.93
Q9WTV0	Q9WTV0	PREB_RAT	Preb	Prolactin regulatory element-binding protein	1	LLGPHETALFSVAVDSR	LLGPHETALFSVAVDSR	3	LLGPHETALFSVAVDSR3	15624.4	12673.9	8773.43
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	LLGPLGMK	LLGPLGMK	2	LLGPLGMK2	30559.7	31425	27665.9
A0A8I6ACU6	A0A8I6ACU6	A0A8I6ACU6_RAT	Glcci1	Glucocorticoid induced 1	1	LLGPLLPASDLMLK	LLGPLLPASDLMLK	2	LLGPLLPASDLMLK2	39229.6	31342.8	40645.6
F1M9D6	F1M9D6	F1M9D6_RAT	Stat1	Signal transducer and activator of transcription	1	LLGPNAGPDGLIPWTR	LLGPNAGPDGLIPWTR	2	LLGPNAGPDGLIPWTR2	27322.4	21004.8	18904.3
Q642G4	Q642G4	PEX14_RAT	Pex14	Peroxisomal membrane protein PEX14	1	LLGPQEEGEGVVDVK	LLGPQEEGEGVVDVK	2	LLGPQEEGEGVVDVK2	28403.2	21562.1	33056.8
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	LLGPSAAADILQLSSSLPLQSR	LLGPSAAADILQLSSSLPLQSR	3	LLGPSAAADILQLSSSLPLQSR3	22961.4	24454.5	23123.1
Q6MGC4	Q6MGC4;A0A8I6GI92	Q6MGC4_RAT	Pfdn6	Prefoldin subunit 6	0	LLGPVLVK	LLGPVLVK	2	LLGPVLVK2	217312	175857	195851
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	LLGQFTLIGIPPAPR	LLGQFTLIGIPPAPR	2	LLGQFTLIGIPPAPR2	219019	187836	203420
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	LLGQFTLIGIPPAPR	LLGQFTLIGIPPAPR	3	LLGQFTLIGIPPAPR3	59176.1	42466.9	65139.9
F1M9D0	B5DF98;F1M9D0	F1M9D0_RAT	Map3k2	Mitogen activated protein kinase kinase kinase 2	0	LLGQGAFGR	LLGQGAFGR	2	LLGQGAFGR2	72908.6	76573.1	75077.6
G3V829	G3V829	G3V829_RAT	Fubp3	Far upstream element binding protein 3	1	LLGQIVDR	LLGQIVDR	2	LLGQIVDR2	14805.3	17593	13118.5
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	LLGSGYGGLAGGSSR	LLGSGYGGLAGGSSR	2	LLGSGYGGLAGGSSR2	10707.3	14590.9	18561.5
P32198	P32198	CPT1A_RAT	Cpt1a	Carnitine O-palmitoyltransferase 1, liver isoform	1	LLGSTIPLCSAQWER	LLGSTIPLC(UniMod:4)SAQWER	2	LLGSTIPLC(UniMod:4)SAQWER2	58358.6	64836.1	68010.7
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	LLGTAGTDVDLR	LLGTAGTDVDLR	2	LLGTAGTDVDLR2	292944	361171	327539
P58200	P58200	VTI1B_RAT	Vti1b	Vesicle transport through interaction with t-SNAREs homolog 1B	1	LLGTAGTEEK	LLGTAGTEEK	2	LLGTAGTEEK2	82614.3	78881.3	77797
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	LLGTFFR	LLGTFFR	2	LLGTFFR2	22810	22259.3	
Q4V8F9	Q4V8F9	HSDL2_RAT	Hsdl2	Hydroxysteroid dehydrogenase-like protein 2	1	LLGTIYTAAEEIEAAGGK	LLGTIYTAAEEIEAAGGK	2	LLGTIYTAAEEIEAAGGK2	10007.5	9543.04	7740.81
P51111	P51111	HD_RAT	Htt	Huntingtin	1	LLGTPFR	LLGTPFR	2	LLGTPFR2	46373.9	50441.7	39764.1
Q03114	Q03114	CDK5_RAT	Cdk5	Cyclin-dependent kinase 5	1	LLGTPTEEQWPAMTK	LLGTPTEEQWPAMTK	2	LLGTPTEEQWPAMTK2	15401.3	18680.5	10552.9
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	LLGTSADVDIHHLASLDPEVYK	LLGTSADVDIHHLASLDPEVYK	3	LLGTSADVDIHHLASLDPEVYK3	9795.89	12967	7982.75
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	LLGTSADVDIHHLASLDPEVYK	LLGTSADVDIHHLASLDPEVYK	4	LLGTSADVDIHHLASLDPEVYK4	24567.8	20855.8	26795
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	LLGTVIQYGNVIQLLHLK	LLGTVIQYGNVIQLLHLK	3	LLGTVIQYGNVIQLLHLK3	11976.7	24880.3	23419.8
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	LLGTVLAK	LLGTVLAK	2	LLGTVLAK2	99284	100743	87869.9
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	LLGTVMATALMPK	LLGTVMATALMPK	2	LLGTVMATALMPK2	12089.8	10150	8232.84
A0A8I6AEI1	A0A8I6AEI1	A0A8I6AEI1_RAT	Hps1	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1	1	LLGTYSR	LLGTYSR	2	LLGTYSR2	97045.9	111911	116078
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	LLGVEGTTLR	LLGVEGTTLR	2	LLGVEGTTLR2	542560	642318	540634
Q68FW7	Q68FW7	SYTM_RAT	Tars2	Threonine--tRNA ligase, mitochondrial	1	LLGVLAESCGGR	LLGVLAESC(UniMod:4)GGR	2	LLGVLAESC(UniMod:4)GGR2	2599.44	6863.28	
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	LLGWCQR	LLGWC(UniMod:4)QR	2	LLGWC(UniMod:4)QR2	13690.5	13262.2	11720.9
Q5XIE1	Q5XIE1	THEM6_RAT	Them6	Protein THEM6	1	LLGWDDR	LLGWDDR	2	LLGWDDR2	23228.3	21978.5	31938
D3ZHA0	D3ZHA0;A0A0G2JXT8;A0A8I5ZV49	FLNC_RAT	Flnc	Filamin-C	0	LLGWIQNK	LLGWIQNK	1	LLGWIQNK1	109815	106823	105718
D3ZHA0	D3ZHA0;A0A0G2JXT8;A0A8I5ZV49	FLNC_RAT	Flnc	Filamin-C	0	LLGWIQNK	LLGWIQNK	2	LLGWIQNK2	7.88972e+06	7.95362e+06	8.58403e+06
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	LLHDQVGVVQFGPYK	LLHDQVGVVQFGPYK	2	LLHDQVGVVQFGPYK2	81121	74210.9	78617.2
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	LLHDQVGVVQFGPYK	LLHDQVGVVQFGPYK	3	LLHDQVGVVQFGPYK3	371585	421564	388510
A0A8I5ZMX5	D3ZGN0;A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	0	LLHDYHR	LLHDYHR	2	LLHDYHR2	6485.85	6475	
E9PU02	E9PU02	E9PU02_RAT	Trappc9	Trafficking protein particle complex subunit 9	1	LLHELVYASR	LLHELVYASR	2	LLHELVYASR2	25970	19530.8	20713.8
E9PU02	E9PU02	E9PU02_RAT	Trappc9	Trafficking protein particle complex subunit 9	1	LLHELVYASR	LLHELVYASR	3	LLHELVYASR3	19271.1	14616.4	18180.3
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	LLHEMILVCDAYR	LLHEMILVC(UniMod:4)DAYR	2	LLHEMILVC(UniMod:4)DAYR2	8693.71	8982.3	5713.08
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	LLHEMILVCDAYR	LLHEMILVC(UniMod:4)DAYR	3	LLHEMILVC(UniMod:4)DAYR3	92708.9	98701.2	69744.2
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	LLHEMILVCDAYRK	LLHEMILVC(UniMod:4)DAYRK	4	LLHEMILVC(UniMod:4)DAYRK4	12946.1	20454.5	8553.66
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	LLHESHLK	LLHESHLK	2	LLHESHLK2	79887.1	85665.2	87673.7
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	LLHEVQELTTEVEK	LLHEVQELTTEVEK	2	LLHEVQELTTEVEK2	75660	63869.1	66510.6
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	LLHEVQELTTEVEK	LLHEVQELTTEVEK	3	LLHEVQELTTEVEK3	297266	240332	346640
A0A8I5ZYB9	A0A8I5ZYB9	A0A8I5ZYB9_RAT	Lrrc32	Leucine rich repeat containing 32	1	LLHFPDLAMFPR	LLHFPDLAMFPR	2	LLHFPDLAMFPR2	46039.4	61770.5	50233.6
A0A8I5ZYB9	A0A8I5ZYB9	A0A8I5ZYB9_RAT	Lrrc32	Leucine rich repeat containing 32	1	LLHFPDLAMFPR	LLHFPDLAMFPR	3	LLHFPDLAMFPR3	161535	139859	168851
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	LLHFYQQSR	LLHFYQQSR	2	LLHFYQQSR2	64362.6	64526	63672.2
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	LLHFYQQSR	LLHFYQQSR	3	LLHFYQQSR3	412273	378978	437206
A1L1J7	A1L1J7	A1L1J7_RAT	Pbk	PDZ binding kinase	1	LLHGDIK	LLHGDIK	2	LLHGDIK2	23632.4	14634.5	22303.4
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	LLHGSFAALLEDALR	LLHGSFAALLEDALR	2	LLHGSFAALLEDALR2		2645.56	3268.3
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	LLHGSFAALLEDALR	LLHGSFAALLEDALR	3	LLHGSFAALLEDALR3	16959.6	17973.6	8505.43
F7EMB2	F7EMB2	F7EMB2_RAT	Rtraf	RNA transcription, translation and transport factor protein	1	LLHIEELR	LLHIEELR	2	LLHIEELR2	5932.21	8377.64	
A0A8I6A6I4	A0A8I6A6I4	A0A8I6A6I4_RAT	Atp11b	Phospholipid-transporting ATPase	1	LLHILEFDSDR	LLHILEFDSDR	2	LLHILEFDSDR2	3610.72	1968.88	4805.05
A0A8I6A6I4	A0A8I6A6I4	A0A8I6A6I4_RAT	Atp11b	Phospholipid-transporting ATPase	1	LLHILEFDSDR	LLHILEFDSDR	3	LLHILEFDSDR3	17415.2	9432.06	19968.2
Q5GFD9	Q5GFD9	IMPCT_RAT	Impact	Protein IMPACT	1	LLHLMEILNVK	LLHLMEILNVK	3	LLHLMEILNVK3	5774.87	2953.16	3540.14
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	LLHNFLATSQK	LLHNFLATSQK	2	LLHNFLATSQK2	9897.34	10610.9	15641.8
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	LLHNFLATSQK	LLHNFLATSQK	3	LLHNFLATSQK3	30464.4	44317	42044.6
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	LLHNHLK	LLHNHLK	2	LLHNHLK2			2708.12
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	LLHNHLR	LLHNHLR	2	LLHNHLR2	16135.3		29301.1
Q03343	Q04400;Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	0	LLHNILPK	LLHNILPK	2	LLHNILPK2	21302.5	22759.5	18319
F1LNS2	F1LNS2	F1LNS2_RAT	Dennd10	DENN domain containing 10	1	LLHPFVFGQYR	LLHPFVFGQYR	3	LLHPFVFGQYR3	12137.5	15168.9	11267.9
B0BN85	B0BN85	SGT1_RAT	Sugt1	Protein SGT1 homolog	1	LLHPIIPEQSTFK	LLHPIIPEQSTFK	3	LLHPIIPEQSTFK3	7944.63	12145	14639
A0A8I6A9M1	A0A8I6A9M1	A0A8I6A9M1_RAT	Cmip	C-Maf-inducing protein	1	LLHPSPDLVSQEATLSEPR	LLHPSPDLVSQEATLSEPR	3	LLHPSPDLVSQEATLSEPR3	4619.26	4588.73	2349.76
F7EWF8	F7EWF8	F7EWF8_RAT	Anapc2	Anaphase-promoting complex subunit 2	1	LLHQFSFSPER	LLHQFSFSPER	3	LLHQFSFSPER3	9522.67	10499.2	
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	LLHQLGFSDEQVLTVK	LLHQLGFSDEQVLTVK	3	LLHQLGFSDEQVLTVK3	25371.4	26249.5	22546.7
A0A8J8Y8E0	A0A8J8Y8E0	A0A8J8Y8E0_RAT	Fibp	FGF1 intracellular binding protein	1	LLHQLIFQIPPSR	LLHQLIFQIPPSR	3	LLHQLIFQIPPSR3	4930.59	5571.21	5732.4
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	LLHRPQVGYIR	LLHRPQVGYIR	3	LLHRPQVGYIR3	4.43674e+06	4.24307e+06	4.02318e+06
A0A0G2JZH0	A0A0G2JZH0	A0A0G2JZH0_RAT	Cab39	Calcium binding protein 39	1	LLHSENYVTK	LLHSENYVTK	2	LLHSENYVTK2	12056.4	10944.2	6838.45
A0A0G2JZH0	A0A0G2JZH0	A0A0G2JZH0_RAT	Cab39	Calcium binding protein 39	1	LLHSENYVTK	LLHSENYVTK	3	LLHSENYVTK3	11354.2	12493	9717.37
F7FQB8	A0A8I5ZWC6;F7FQB8	F7FQB8_RAT	Kpna4	Karyopherin subunit alpha 4	0	LLHSPHQNVCEQAVWALGNIIGDGPQCR	LLHSPHQNVC(UniMod:4)EQAVWALGNIIGDGPQC(UniMod:4)R	4	LLHSPHQNVC(UniMod:4)EQAVWALGNIIGDGPQC(UniMod:4)R4	149353	131102	148814
Q68FV6	Q68FV6	GLMP_RAT	Glmp	Glycosylated lysosomal membrane protein	1	LLHTADVCQVEVALVGASPR	LLHTADVC(UniMod:4)QVEVALVGASPR	3	LLHTADVC(UniMod:4)QVEVALVGASPR3	6721.12	5905.34	8118.16
G3V6R9	G3V6R9	G3V6R9_RAT	Bloc1s4	Biogenesis of lysosomal organelles complex 1 subunit 4	1	LLHTISVPALFK	LLHTISVPALFK	3	LLHTISVPALFK3	20672	21128.9	35945.5
Q4V7A0	Q4V7A0	SKI8_RAT	Skic8	Superkiller complex protein 8	1	LLHTLEGHAMPIR	LLHTLEGHAMPIR	3	LLHTLEGHAMPIR3	2448.27		
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	LLHVAVSDVNDDVR	LLHVAVSDVNDDVR	2	LLHVAVSDVNDDVR2	5256.12	3391.83	6230.06
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	LLHVAVSDVNDDVR	LLHVAVSDVNDDVR	3	LLHVAVSDVNDDVR3	57237.1	49352.9	62513.6
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	LLHVAVSDVNDDVRR	LLHVAVSDVNDDVRR	3	LLHVAVSDVNDDVRR3		27916.9	25912.8
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	LLHVAVSDVNDDVRR	LLHVAVSDVNDDVRR	4	LLHVAVSDVNDDVRR4	128126	110352	105269
A0A0G2K881	A0A0G2K881	A0A0G2K881_RAT	RT1-N3	RT1 class Ib, locus N3	1	LLHWYDQLAFDGIDHPTLNK	LLHWYDQLAFDGIDHPTLNK	4	LLHWYDQLAFDGIDHPTLNK4	4849.58		
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	LLHYAGEVTYSVTGFLDK	LLHYAGEVTYSVTGFLDK	3	LLHYAGEVTYSVTGFLDK3	16000	10214.2	5765.64
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	LLHYAGEVTYSVTGFLDKNNDLLFR	LLHYAGEVTYSVTGFLDKNNDLLFR	4	LLHYAGEVTYSVTGFLDKNNDLLFR4	14927.9	13697.1	14320.2
A0A8I5ZP57	A0A8I5ZP57	A0A8I5ZP57_RAT	Pkdcc	Protein kinase domain containing, cytoplasmic	1	LLHYLAHSPLGSVTLLDFRPR	LLHYLAHSPLGSVTLLDFRPR	4	LLHYLAHSPLGSVTLLDFRPR4	11105.1	18209.9	16575.2
D3ZVM5	D3ZVM5	D3ZVM5_RAT	Hspa12b	Heat shock protein family A (Hsp70) member 12B	1	LLIALEPEAASVYCR	LLIALEPEAASVYC(UniMod:4)R	2	LLIALEPEAASVYC(UniMod:4)R2	4051.15	3875.13	3181.9
A0A8I5ZYV4;A0A8I6AFR0	A0A8I5ZYV4;A0A8I6AFR0	A0A8I5ZYV4_RAT;A0A8I6AFR0_RAT	ENSRNOG00000066203;ENSRNOG00000068847	Ig-like domain-containing protein	0	LLICLRESY	LLIC(UniMod:4)LRESY	2	LLIC(UniMod:4)LRESY2	11630.2	8856.66	
A9CMA6	A9CMA6	TM163_RAT	Tmem163	Transmembrane protein 163	1	LLIDMVPR	LLIDMVPR	2	LLIDMVPR2	17668.1	12162.4	15761.3
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	LLIDPASIR	LLIDPASIR	2	LLIDPASIR2	75284.5	65310.7	53032.1
D3ZE15	D3ZE15;A0A8I6A382;F1LZC5	D3ZE15_RAT	Ndufa13	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13	0	LLIEDLEAR	LLIEDLEAR	2	LLIEDLEAR2	87392.8	98595.6	94849.1
P07335	P07335	KCRB_RAT	Ckb	Creatine kinase B-type	1	LLIEMEQR	LLIEMEQR	2	LLIEMEQR2	324896	256750	253952
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	LLIESLATMETDNRPELQEK	LLIESLATMETDNRPELQEK	3	LLIESLATMETDNRPELQEK3	5726.96	6319.6	18588.2
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	LLIESLGK	LLIESLGK	2	LLIESLGK2	119806	118125	170127
D3ZXY2	D3ZXY2	D3ZXY2_RAT	Pdzd8	PDZ domain containing 8	1	LLIFGSYER	LLIFGSYER	2	LLIFGSYER2	4920.69	6742.28	6436.69
Q68FU7	Q68FU7	COQ6_RAT	Coq6	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial	1	LLIGADGHNSGVR	LLIGADGHNSGVR	3	LLIGADGHNSGVR3	28110.4	29976.9	27913.7
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	LLIGTVFHR	LLIGTVFHR	2	LLIGTVFHR2	100358	102829	66570.5
P61980	A0A8I5ZZG4;P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	LLIHQSLAGGIIGVK	LLIHQSLAGGIIGVK	2	LLIHQSLAGGIIGVK2	18553.8	10028	5910.55
P61980	A0A8I5ZZG4;P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	LLIHQSLAGGIIGVK	LLIHQSLAGGIIGVK	3	LLIHQSLAGGIIGVK3	126531	102156	102930
A0A0G2JW41	A0A0G2JW41	A0A0G2JW41_RAT	ENSRNOG00000065855	Ig-like domain-containing protein	1	LLIHSGSTLQSGTPSR	LLIHSGSTLQSGTPSR	2	LLIHSGSTLQSGTPSR2	12496.6	2719.94	8967.93
A0A0G2JW41	A0A0G2JW41	A0A0G2JW41_RAT	ENSRNOG00000065855	Ig-like domain-containing protein	1	LLIHSGSTLQSGTPSR	LLIHSGSTLQSGTPSR	3	LLIHSGSTLQSGTPSR3	238301	226818	234139
P62824;Q63941	P62824;Q63941	RAB3B_RAT;RAB3C_RAT	Rab3b;Rab3c	Ras-related protein Rab-3C	0	LLIIGNSSVGK	LLIIGNSSVGK	2	LLIIGNSSVGK2	466092	354969	466158
Q02353	Q02353	NDST1_RAT	Ndst1	Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1	1	LLIIGPQK	LLIIGPQK	2	LLIIGPQK2	18263.9	23998.4	19377.4
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	LLIIGTTSR	LLIIGTTSR	2	LLIIGTTSR2	116272	117512	122119
Q5PQT2	Q5PQT2;D3ZW40	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	0	LLILDAR	LLILDAR	2	LLILDAR2	53883.9	60418	49381.1
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	LLILDDATSALDAGNQLR	LLILDDATSALDAGNQLR	2	LLILDDATSALDAGNQLR2	22186.4	13935.4	19785.2
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	LLILDDATSALDAGNQLR	LLILDDATSALDAGNQLR	3	LLILDDATSALDAGNQLR3	28292.6	21401.6	24516.5
M0R3L8	M0R3L8	M0R3L8_RAT	Gba	Glucosylceramidase	1	LLILDDQR	LLILDDQR	2	LLILDDQR2	84342.8	86098.4	85326.5
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	LLILDEVHLLHEDR	LLILDEVHLLHEDR	3	LLILDEVHLLHEDR3	9864.97		6820.86
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	LLILDEVHLLHEDR	LLILDEVHLLHEDR	4	LLILDEVHLLHEDR4		2899.73	4259.58
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	LLILEYSR	LLILEYSR	2	LLILEYSR2	17562.3	22722.7	29708.2
A0A8I5ZZK5	A0A8I5ZZK5	A0A8I5ZZK5_RAT	Bank1	B-cell scaffold protein with ankyrin repeats 1	1	LLILSNNLLK	LLILSNNLLK	2	LLILSNNLLK2	11491.7	7382.69	5251.23
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	LLILTHEDPPEELCGFQGAELLSEK	LLILTHEDPPEELC(UniMod:4)GFQGAELLSEK	3	LLILTHEDPPEELC(UniMod:4)GFQGAELLSEK3	9919.7	4294.12	
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	LLINAHEQQTQQLK	LLINAHEQQTQQLK	3	LLINAHEQQTQQLK3	28550.3	30188	22192.7
G3V6W5	G3V6W5	G3V6W5_RAT	Ifih1	RNA helicase	1	LLINDVLDTCSEK	LLINDVLDTC(UniMod:4)SEK	2	LLINDVLDTC(UniMod:4)SEK2	5602.2	8598.8	3158.89
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	LLINLLK	LLINLLK	2	LLINLLK2	18806	19657.3	9843.48
Q8R4G8	Q8R4G8	KCTD1_RAT	Kctd1	BTB/POZ domain-containing protein KCTD1	1	LLIPDDFKDYTLLYEEAK	LLIPDDFKDYTLLYEEAK	3	LLIPDDFKDYTLLYEEAK3	3894.06		7237.19
Q6V0K7	Q6V0K7	OIT3_RAT	Oit3	Oncoprotein-induced transcript 3 protein	1	LLIPVTCEFPR	LLIPVTC(UniMod:4)EFPR	2	LLIPVTC(UniMod:4)EFPR2	251207	251120	300201
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	LLIQAAIVR	LLIQAAIVR	2	LLIQAAIVR2	191516	191826	155808
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	LLIQESVWDEAMK	LLIQESVWDEAMK	2	LLIQESVWDEAMK2	3732.6		30578.8
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	LLIQESVWDEAMKR	LLIQESVWDEAMKR	3	LLIQESVWDEAMKR3	3716.55	5502.26	
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	LLIQGDSSGR	LLIQGDSSGR	2	LLIQGDSSGR2	34366.9	36109	33935.5
D3ZES2	D3ZES2	D3ZES2_RAT	Trappc6b	Trafficking protein particle complex subunit 6B	1	LLIQLSAGK	LLIQLSAGK	2	LLIQLSAGK2	27872.6	20079.2	16990.2
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	LLIQTWEAER	LLIQTWEAER	2	LLIQTWEAER2	68329.6	65757.9	60999.7
B0BN30	B0BN30	B0BN30_RAT	Mtch1	Mitochondrial carrier 1	1	LLIQVGHEPMPPTLGTNVLGR	LLIQVGHEPMPPTLGTNVLGR	3	LLIQVGHEPMPPTLGTNVLGR3		4032.68	
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	LLIQYHEPELCSFLDTK	LLIQYHEPELC(UniMod:4)SFLDTK	3	LLIQYHEPELC(UniMod:4)SFLDTK3	33354.2	29204.6	22771.2
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	LLIQYHEPELCSFLDTKK	LLIQYHEPELC(UniMod:4)SFLDTKK	4	LLIQYHEPELC(UniMod:4)SFLDTKK4	12627.8	17133.3	18396.7
A0A8I6AQD7	A0A8I6AQD7	A0A8I6AQD7_RAT	ENSRNOG00000064041	Ig-like domain-containing protein	1	LLISEGNTLRPGVPSR	LLISEGNTLRPGVPSR	3	LLISEGNTLRPGVPSR3	1.94953e+06	1.89108e+06	2.18997e+06
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	LLISELHLR	LLISELHLR	2	LLISELHLR2	11906.7	11067.1	4051.57
D3ZFJ6	D3ZFJ6	D3ZFJ6_RAT	Lactb	Lactamase, beta	1	LLISHLSGIR	LLISHLSGIR	2	LLISHLSGIR2	3233.61	1833.13	3791.96
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	LLISLSQGNR	LLISLSQGNR	2	LLISLSQGNR2	16909.6	33813.7	24919
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	LLISLSQGNRDESTNVDMSLVQR	LLISLSQGNRDESTNVDMSLVQR	3	LLISLSQGNRDESTNVDMSLVQR3	32614.4	31162.7	20090.2
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	LLITGTEQFNQKPK	LLITGTEQFNQKPK	3	LLITGTEQFNQKPK3	31691.5	49227.8	46299
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	LLITIHDR	LLITIHDR	2	LLITIHDR2	16388.5	7802	5265.26
P04642	P04642;A0A8I6ASS6;A0A8I6GK09	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	LLIVSNPVDILTYVAWK	LLIVSNPVDILTYVAWK	2	LLIVSNPVDILTYVAWK2	64337.2		
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	LLIVSTSPYSEK	LLIVSTSPYSEK	2	LLIVSTSPYSEK2	89459	76828.1	90866.6
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	LLIVSTSPYSEKDTK	LLIVSTSPYSEKDTK	2	LLIVSTSPYSEKDTK2	2770.55	4143.88	3139.81
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	LLIVSTSPYSEKDTK	LLIVSTSPYSEKDTK	3	LLIVSTSPYSEKDTK3	29535.8	40311.3	35849.5
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	LLIVVELLLGEIPDR	LLIVVELLLGEIPDR	3	LLIVVELLLGEIPDR3		4944.4	1954.54
D3ZYE2	D3ZYE2	D3ZYE2_RAT	RGD1565617	Similar to Ig variable region, light chain	1	LLIYGASNLESGVPAR	LLIYGASNLESGVPAR	2	LLIYGASNLESGVPAR2	83510.6	67028.6	67600.2
F1LTN6	F1LTN6	F1LTN6_RAT	AABR07060872.1	Ig-like domain-containing protein	1	LLIYGASNR	LLIYGASNR	2	LLIYGASNR2	6.69421e+06	7.12736e+06	7.37324e+06
F1M5J8	F1M5J8	F1M5J8_RAT	ENSRNOG00000067894	Ig-like domain-containing protein	1	LLIYLASTR	LLIYLASTR	2	LLIYLASTR2	180270	149483	147234
A0A8I6AA60;A0A8I6ANN1	A0A8I6ANN1;A0A8I6AA60	A0A8I6AA60_RAT;A0A8I6ANN1_RAT	ENSRNOG00000065237;ENSRNOG00000067233	Ig-like domain-containing protein	0	LLIYNANSLQTGIPSR	LLIYNANSLQTGIPSR	2	LLIYNANSLQTGIPSR2	194596	148616	148035
A0A8I6AA60;A0A8I6ANN1	A0A8I6ANN1;A0A8I6AA60	A0A8I6AA60_RAT;A0A8I6ANN1_RAT	ENSRNOG00000065237;ENSRNOG00000067233	Ig-like domain-containing protein	0	LLIYNANSLQTGIPSR	LLIYNANSLQTGIPSR	3	LLIYNANSLQTGIPSR3	222705	199415	219280
Q68FP2	Q68FP2	PON3_RAT	Pon3	Serum paraoxonase/lactonase 3	1	LLIYNPEDPPGSEVLR	LLIYNPEDPPGSEVLR	2	LLIYNPEDPPGSEVLR2	75097.7	57610.5	68049.1
Q68FP2	Q68FP2	PON3_RAT	Pon3	Serum paraoxonase/lactonase 3	1	LLIYNPEDPPGSEVLR	LLIYNPEDPPGSEVLR	3	LLIYNPEDPPGSEVLR3	13394.3	13082.9	10314.7
A0A8I5ZN60;A0A8I6AHQ4;A0A8I6AHX0	A0A8I6AHX0;A0A8I5ZN60;A0A8I6AHQ4	A0A8I5ZN60_RAT;A0A8I6AHQ4_RAT;A0A8I6AHX0_RAT	ENSRNOG00000066072;ENSRNOG00000066922;ENSRNOG00000069193	Ig-like domain-containing protein	0	LLIYNTNNLQTGIPSR	LLIYNTNNLQTGIPSR	2	LLIYNTNNLQTGIPSR2	219292	179376	170145
A0A8I5ZN60;A0A8I6AHQ4;A0A8I6AHX0	A0A8I6AHX0;A0A8I5ZN60;A0A8I6AHQ4	A0A8I5ZN60_RAT;A0A8I6AHQ4_RAT;A0A8I6AHX0_RAT	ENSRNOG00000066072;ENSRNOG00000066922;ENSRNOG00000069193	Ig-like domain-containing protein	0	LLIYNTNNLQTGIPSR	LLIYNTNNLQTGIPSR	3	LLIYNTNNLQTGIPSR3	44039.6	42510	46606.6
A0A8I5Y7P7	A0A8I5Y7P7	A0A8I5Y7P7_RAT	Igkvl-ps6	Immunoglobulin V-set domain-containing protein	1	LLIYNTNSLHTGIPSR	LLIYNTNSLHTGIPSR	3	LLIYNTNSLHTGIPSR3		4364.24	2055.35
A0A0G2K9Z5	A0A0G2K9Z5	A0A0G2K9Z5_RAT	AABR07060971.1	Ig-like domain-containing protein	1	LLIYQVSNLGSGVPDR	LLIYQVSNLGSGVPDR	2	LLIYQVSNLGSGVPDR2	37677.3	36264.8	40489.3
A0A0G2K9Z5	A0A0G2K9Z5	A0A0G2K9Z5_RAT	AABR07060971.1	Ig-like domain-containing protein	1	LLIYQVSNLGSGVPDR	LLIYQVSNLGSGVPDR	3	LLIYQVSNLGSGVPDR3	11107.7	10367.2	14908.4
A0A8I5ZX10	A0A8I5ZX10	A0A8I5ZX10_RAT	ENSRNOG00000063329	Ig-like domain-containing protein	1	LLIYSGSTLQSGTPSR	LLIYSGSTLQSGTPSR	2	LLIYSGSTLQSGTPSR2	299393	206634	152529
A0A8I5ZX10	A0A8I5ZX10	A0A8I5ZX10_RAT	ENSRNOG00000063329	Ig-like domain-containing protein	1	LLIYSGSTLQSGTPSR	LLIYSGSTLQSGTPSR	3	LLIYSGSTLQSGTPSR3	4567.64	2656.25	
D3ZMS7	D3ZMS7	D3ZMS7_RAT	ENSRNOG00000070810	Ig-like domain-containing protein	1	LLIYYTNNLQTGISSR	LLIYYTNNLQTGISSR	2	LLIYYTNNLQTGISSR2	3389.6		2596.86
A0A8I5ZMM5	A0A8I5ZMM5	A0A8I5ZMM5_RAT	ENSRNOG00000070091	Ig-like domain-containing protein	1	LLIYYTNSLQTGIPSR	LLIYYTNSLQTGIPSR	2	LLIYYTNSLQTGIPSR2	19369.3	19587.2	14208.9
A0A8I5ZMM5	A0A8I5ZMM5	A0A8I5ZMM5_RAT	ENSRNOG00000070091	Ig-like domain-containing protein	1	LLIYYTNSLQTGIPSR	LLIYYTNSLQTGIPSR	3	LLIYYTNSLQTGIPSR3	7525.98	5622.01	7862.27
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	LLKLETLDLSHNHLQSLPSLGR	LLKLETLDLSHNHLQSLPSLGR	4	LLKLETLDLSHNHLQSLPSLGR4	7692.11	8599.03	6253.74
Q5XIU9	Q5XIU9	PGRC2_RAT	Pgrmc2	Membrane-associated progesterone receptor component 2	1	LLKPGEEPSEYTDEEDTK	LLKPGEEPSEYTDEEDTK	3	LLKPGEEPSEYTDEEDTK3	7811.43	6695.47	6320.36
P10868	P10868	GAMT_RAT	Gamt	Guanidinoacetate N-methyltransferase	1	LLKPGGILTYCNLTSWGELMK	LLKPGGILTYC(UniMod:4)NLTSWGELMK	3	LLKPGGILTYC(UniMod:4)NLTSWGELMK3	5776.23	6520.52	3925.94
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	LLKPHESPSECAQR	LLKPHESPSEC(UniMod:4)AQR	2	LLKPHESPSEC(UniMod:4)AQR2	7791.63	5175.45	
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	LLKPHESPSECAQR	LLKPHESPSEC(UniMod:4)AQR	3	LLKPHESPSEC(UniMod:4)AQR3	131384	156558	134766
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	LLKPHESPSECAQR	LLKPHESPSEC(UniMod:4)AQR	4	LLKPHESPSEC(UniMod:4)AQR4	199188	203720	185488
Q5U2R9	Q5U2R9	Q5U2R9_RAT	Scfd2	Sec1 family domain containing 2	1	LLKPLNIPELLFATDR	LLKPLNIPELLFATDR	3	LLKPLNIPELLFATDR3	9764.11	11130.8	2713.75
P54313	P54313	GBB2_RAT	Gnb2	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2	1	LLLAGYDDFNCNIWDAMK	LLLAGYDDFNC(UniMod:4)NIWDAMK	3	LLLAGYDDFNC(UniMod:4)NIWDAMK3	24875.9	9715.57	12022.9
P54311	P54311	GBB1_RAT	Gnb1	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1	1	LLLAGYDDFNCNVWDALK	LLLAGYDDFNC(UniMod:4)NVWDALK	3	LLLAGYDDFNC(UniMod:4)NVWDALK3		8831.06	
O35353	O35353	GBB4_RAT	Gnb4	Guanine nucleotide-binding protein subunit beta-4	1	LLLAGYDDFNCSVWDALK	LLLAGYDDFNC(UniMod:4)SVWDALK	3	LLLAGYDDFNC(UniMod:4)SVWDALK3	16107.7	15111	15851.5
A0A8I6A9K0	A0A8I6A9K0	A0A8I6A9K0_RAT	ENSRNOG00000069813	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1	1	LLLAGYNDFNCNVWDALK	LLLAGYNDFNC(UniMod:4)NVWDALK	3	LLLAGYNDFNC(UniMod:4)NVWDALK3	8300.98		13597.7
P29994	P29994;P29995	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	0	LLLAIMESR	LLLAIMESR	2	LLLAIMESR2			62938.3
Q6IRJ7	Q6IRJ7	Q6IRJ7_RAT	Anxa7	Annexin	1	LLLAIVGQ	LLLAIVGQ	1	LLLAIVGQ1	11370	18533.7	17125
Q6IRJ7	Q6IRJ7	Q6IRJ7_RAT	Anxa7	Annexin	1	LLLAIVGQ	LLLAIVGQ	2	LLLAIVGQ2	9164.68	9733.57	12881.6
Q63269	Q63269	ITPR3_RAT	Itpr3	Inositol 1,4,5-trisphosphate receptor type 3	1	LLLALMESR	LLLALMESR	2	LLLALMESR2	103453	92270.4	
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	LLLASEGR	LLLASEGR	2	LLLASEGR2	44396.8	31306.1	47984
Q9Z2Q7	Q9Z2Q7	STX8_RAT	Stx8	Syntaxin-8	1	LLLASFK	LLLASFK	2	LLLASFK2	65582	71318.9	58027.6
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	LLLATNR	LLLATNR	2	LLLATNR2	25450.2	34452.4	24368.3
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	LLLATNRDDVR	LLLATNRDDVR	3	LLLATNRDDVR3	57496.1	52531.7	56793.5
D3ZYQ7	D3ZYQ7	D3ZYQ7_RAT	Klhl14	Kelch-like family member 14	1	LLLDAMNYHLMPFR	LLLDAMNYHLMPFR	3	LLLDAMNYHLMPFR3	6641.71	2683.33	9729.11
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	LLLDPEFTLLQR	LLLDPEFTLLQR	2	LLLDPEFTLLQR2	20381.8	28344	26727.9
Q6P791	Q6P791	LTOR1_RAT	Lamtor1	Ragulator complex protein LAMTOR1	1	LLLDPSNTPTK	LLLDPSNTPTK	2	LLLDPSNTPTK2	156032	192204	185045
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	LLLDPYYR	LLLDPYYR	2	LLLDPYYR2		26231.6	18490.4
O88959	O88959	INHBE_RAT	Inhbe	Inhibin beta E chain	1	LLLDTAGQQRPFLELK	LLLDTAGQQRPFLELK	3	LLLDTAGQQRPFLELK3	153457	142180	136563
A0A0U1RS29	A0A0U1RS29	A0A0U1RS29_RAT	Rgl2	Ral guanine nucleotide dissociation stimulator-like 2	1	LLLDTNPPGGVVLSSFR	LLLDTNPPGGVVLSSFR	2	LLLDTNPPGGVVLSSFR2	13719.3	24212.3	22590
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	LLLEDLVK	LLLEDLVK	2	LLLEDLVK2	22763.4	16508.5	16635.8
B4F779	B4F779	DP13B_RAT	Appl2	DCC-interacting protein 13-beta	1	LLLEEALQDSPQTR	LLLEEALQDSPQTR	2	LLLEEALQDSPQTR2	3349.48	3820.99	5102.35
Q62784	Q62784	INP4A_RAT	Inpp4a	Inositol polyphosphate-4-phosphatase type I A	1	LLLEEDAAR	LLLEEDAAR	2	LLLEEDAAR2	10978.3	9426.64	13320.1
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	LLLEEDENEESGSIK	LLLEEDENEESGSIK	2	LLLEEDENEESGSIK2	3782.12	4152.83	2532.07
F1LP42	F1LP42	F1LP42_RAT	Ihh	Hedgehog protein	1	LLLEESTFHPLGMSGAGS	LLLEESTFHPLGMSGAGS	2	LLLEESTFHPLGMSGAGS2	8575.84	6756.8	9188.32
Q5PPJ9	Q5PPJ9	SHLB2_RAT	Sh3glb2	Endophilin-B2	1	LLLEGISSAHVNHLR	LLLEGISSAHVNHLR	3	LLLEGISSAHVNHLR3	28050.3	23632.5	29319.9
Q5PPJ9	Q5PPJ9	SHLB2_RAT	Sh3glb2	Endophilin-B2	1	LLLEGISSAHVNHLR	LLLEGISSAHVNHLR	4	LLLEGISSAHVNHLR4	39612.8	41210	39367.4
Q6AYE2	Q6AYE2	SHLB1_RAT	Sh3glb1	Endophilin-B1	1	LLLEGISSTHAHHLR	LLLEGISSTHAHHLR	3	LLLEGISSTHAHHLR3	26192.7	12212.8	12933.3
Q6AYE2	Q6AYE2	SHLB1_RAT	Sh3glb1	Endophilin-B1	1	LLLEGISSTHAHHLR	LLLEGISSTHAHHLR	4	LLLEGISSTHAHHLR4	90923.6	102799	70033.6
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	LLLEGVENK	LLLEGVENK	2	LLLEGVENK2	81901	47167.2	64998
D3ZZ81	A0A8I6AK94;Q91Z79;D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	0	LLLEHLECLVSR	LLLEHLEC(UniMod:4)LVSR	2	LLLEHLEC(UniMod:4)LVSR2	15267.3	6417.08	7739.36
D3ZZ81	A0A8I6AK94;Q91Z79;D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	0	LLLEHLECLVSR	LLLEHLEC(UniMod:4)LVSR	3	LLLEHLEC(UniMod:4)LVSR3	74153.3	87668	87177.1
A0A8I6AGL0	A0A8I6AGL0	A0A8I6AGL0_RAT	Ankrd44	Ankyrin repeat domain 44	1	LLLEIADNPEVVDVK	LLLEIADNPEVVDVK	2	LLLEIADNPEVVDVK2	2923.82	3315.19	
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	LLLEIPEK	LLLEIPEK	2	LLLEIPEK2	13731.7	7581.98	5569.39
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	LLLENDASPNLATTAGHTPLHTAAR	LLLENDASPNLATTAGHTPLHTAAR	4	LLLENDASPNLATTAGHTPLHTAAR4	18933.3	9750.5	11058.3
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	LLLEQSANEIWEAIK	LLLEQSANEIWEAIK	2	LLLEQSANEIWEAIK2	15305.7	13781.8	17136.3
P04905	P04905;P08009;Q5BK56	GSTM1_RAT	Gstm1	Glutathione S-transferase Mu 1	0	LLLEYTDSSYEEK	LLLEYTDSSYEEK	2	LLLEYTDSSYEEK2	6812.29	7127.16	7446.11
P04905	P04905;P08009;Q5BK56	GSTM1_RAT	Gstm1	Glutathione S-transferase Mu 1	0	LLLEYTDSSYEEKR	LLLEYTDSSYEEKR	3	LLLEYTDSSYEEKR3	5140.71	6528.33	1855.87
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	LLLFAIQR	LLLFAIQR	2	LLLFAIQR2	48530.2	51011.9	47662.4
Q5M7A4	Q5M7A4	UBA5_RAT	Uba5	Ubiquitin-like modifier-activating enzyme 5	1	LLLFDYDK	LLLFDYDK	2	LLLFDYDK2	206270	197976	209426
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	LLLFICGSK	LLLFIC(UniMod:4)GSK	2	LLLFIC(UniMod:4)GSK2	54616.6	49426.4	45004.2
A0A8I5ZUI2	A0A8I5ZUI2	A0A8I5ZUI2_RAT	Ano10	Anoctamin	1	LLLGAEAVGLVK	LLLGAEAVGLVK	2	LLLGAEAVGLVK2	33084.2	22786.2	20573
Q5XIH7	Q5XIH7	PHB2_RAT	Phb2	Prohibitin-2	1	LLLGAGAVAYGVR	LLLGAGAVAYGVR	2	LLLGAGAVAYGVR2	137429	159516	162216
Q5XIH7	Q5XIH7	PHB2_RAT	Phb2	Prohibitin-2	1	LLLGAGAVAYGVR	LLLGAGAVAYGVR	3	LLLGAGAVAYGVR3	5821.86	7542.29	6520.05
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	LLLGLTSLVDGK	LLLGLTSLVDGK	2	LLLGLTSLVDGK2	30386.3	36518	26432.2
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	LLLGTEK	LLLGTEK	1	LLLGTEK1	7019.96	4558.96	
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	LLLGTEK	LLLGTEK	2	LLLGTEK2	1.67159e+06	2.0581e+06	1.78028e+06
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	LLLHEVPTGEVWVR	LLLHEVPTGEVWVR	3	LLLHEVPTGEVWVR3		4082.03	
Q80WD1	Q80WD1	R4RL2_RAT	Rtn4rl2	Reticulon-4 receptor-like 2	1	LLLHGNR	LLLHGNR	2	LLLHGNR2	6475.18	5283.84	4284.1
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	LLLHYGR	LLLHYGR	2	LLLHYGR2	119776	115732	105120
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LLLHYSPQACK	LLLHYSPQAC(UniMod:4)K	2	LLLHYSPQAC(UniMod:4)K2	26263.2	31012.2	31043.1
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LLLHYSPQACK	LLLHYSPQAC(UniMod:4)K	3	LLLHYSPQAC(UniMod:4)K3	126699	171527	157017
P10536	P35281;A0A8I6A3I5;P70550;A0A8I6ARI7;A0A8I6A3Z4;Q6NYB7;P10536;P35280;A0A8I6ATH8;A0A8I6AT03;P35286;P35289	RAB1B_RAT	Rab1b	Ras-related protein Rab-1B	0	LLLIGDSGVGK	LLLIGDSGVGK	2	LLLIGDSGVGK2	123253	125060	114439
P18297	P18297	SPRE_RAT	Spr	Sepiapterin reductase	1	LLLINNAGTLGDVSK	LLLINNAGTLGDVSK	2	LLLINNAGTLGDVSK2		22681.6	21785.2
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LLLIQAFRPDR	LLLIQAFRPDR	3	LLLIQAFRPDR3	92567.8	94265.9	70117.9
A0A8I6AT07	A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	1	LLLITSTTPQWK	LLLITSTTPQWK	2	LLLITSTTPQWK2	27059.9	18354.4	18549.3
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	LLLIWQHK	LLLIWQHK	2	LLLIWQHK2	4973.14	3822.24	2889.33
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	LLLLAER	LLLLAER	2	LLLLAER2	34955.5	43240.1	33561.2
Q4FZT2	Q4FZT2	PPME1_RAT	Ppme1	Protein phosphatase methylesterase 1	1	LLLLAGVDR	LLLLAGVDR	2	LLLLAGVDR2	32207.5	13445.8	22269.1
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	LLLLDTVTMQVTAR	LLLLDTVTMQVTAR	2	LLLLDTVTMQVTAR2	44398.4	39893.3	20847.6
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	LLLLDTVTMQVTAR	LLLLDTVTMQVTAR	3	LLLLDTVTMQVTAR3	19058.1	14641.6	11326.8
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	LLLLDYPPDR	LLLLDYPPDR	2	LLLLDYPPDR2	7084.64	4843.58	5108.62
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	LLLLEGGPGSPSCLLGGK	LLLLEGGPGSPSC(UniMod:4)LLGGK	2	LLLLEGGPGSPSC(UniMod:4)LLGGK2	6781.17	1907.02	2054.87
P04897	P59215;P38406;P10824;D4AA42;P04897;D3ZSS5;P08753;P29348;Q63803	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	0	LLLLGAGESGK	LLLLGAGESGK	2	LLLLGAGESGK2	351593	412765	422126
B2RYI0	B2RYI0	WDR91_RAT	Wdr91	WD repeat-containing protein 91	1	LLLLGSGVGTVR	LLLLGSGVGTVR	2	LLLLGSGVGTVR2	31749.5	15604	27556.7
P82471	Q9JID2;P82471;A0A8J8XRQ3	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	0	LLLLGTGESGK	LLLLGTGESGK	2	LLLLGTGESGK2	459401	455322	561651
P82471	Q9JID2;P82471;A0A8J8XRQ3	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	0	LLLLGTGESGKSTFIK	LLLLGTGESGKSTFIK	3	LLLLGTGESGKSTFIK3	9634.52		
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	LLLLGTSNSGK	LLLLGTSNSGK	2	LLLLGTSNSGK2	529651	639944	680774
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	LLLLIPTDPAIQEALDQLDSLGR	LLLLIPTDPAIQEALDQLDSLGR	3	LLLLIPTDPAIQEALDQLDSLGR3	2882.88	4168.5	1557.03
P55146	P55146	TYRO3_RAT	Tyro3	Tyrosine-protein kinase receptor TYRO3	1	LLLLQQGLLPHSSC	LLLLQQGLLPHSSC(UniMod:4)	2	LLLLQQGLLPHSSC(UniMod:4)2	7815.86	2035.6	
Q6AYB2	Q6AYB2	Q6AYB2_RAT	Sphk2	Sphingosine kinase 2	1	LLLLVNPFGGR	LLLLVNPFGGR	2	LLLLVNPFGGR2	25267.3	22955.2	24670.8
Q62881	Q62881	NOL3_RAT	Nol3	Nucleolar protein 3	1	LLLLVQSK	LLLLVQSK	2	LLLLVQSK2	10763.8	13803.9	13848.2
Q9WUD9	Q9WUD9	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	1	LLLNAENPR	LLLNAENPR	2	LLLNAENPR2	453143	487756	500700
A0A8I5ZZ05	A0A8I5ZZ05	A0A8I5ZZ05_RAT	Soga1	Suppressor of glucose, autophagy associated 1	1	LLLNELAK	LLLNELAK	2	LLLNELAK2	9586.6	9533.65	12748.4
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LLLNGAQTFR	LLLNGAQTFR	2	LLLNGAQTFR2	1.49821e+06	1.74845e+06	1.98942e+06
Q3T1K5	B2GUZ5;Q3T1K5	CAZA2_RAT	Capza2	F-actin-capping protein subunit alpha-2	0	LLLNNDNLLR	LLLNNDNLLR	2	LLLNNDNLLR2	781677	753081	802383
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	LLLNVTPTVRPDADQMTK	LLLNVTPTVRPDADQMTK	3	LLLNVTPTVRPDADQMTK3	95124.1	82263.5	97146.2
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	LLLPEDPLISGLLNSQALK	LLLPEDPLISGLLNSQALK	3	LLLPEDPLISGLLNSQALK3	2260.93		1580.1
Q00715	Q00715;A0A8I6A2W1;A0A8I6AGQ8;D3ZNZ9;A0A8I5ZLH6;A0A8I6A7P3;M0RBQ5;A0A8I5ZSA8;A0A8I6AFW8;Q00729;G3V9C7	H2B1_RAT		Histone H2B type 1	0	LLLPGELAK	LLLPGELAK	2	LLLPGELAK2	356380	170836	166668
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	LLLPGSSPSSPEDEVK	LLLPGSSPSSPEDEVK	2	LLLPGSSPSSPEDEVK2	8995.89	8420.91	4805.68
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	LLLPGSSPSSPEDEVKDR	LLLPGSSPSSPEDEVKDR	3	LLLPGSSPSSPEDEVKDR3	56684.4	48013.1	54274.3
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	LLLPGTYSVTAK	LLLPGTYSVTAK	2	LLLPGTYSVTAK2	5.73613e+06	4.78803e+06	4.03036e+06
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	LLLPLIFR	LLLPLIFR	2	LLLPLIFR2	11588.2	10607.4	10878.5
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	LLLPQQAGFGECDR	LLLPQQAGFGEC(UniMod:4)DR	2	LLLPQQAGFGEC(UniMod:4)DR2	122517	130904	114123
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	LLLPQQAGFGECDR	LLLPQQAGFGEC(UniMod:4)DR	3	LLLPQQAGFGEC(UniMod:4)DR3	40288.3	38026.2	44159.9
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	LLLPWLEAR	LLLPWLEAR	2	LLLPWLEAR2	1.78224e+06	1.86445e+06	1.77322e+06
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	LLLQAIQSFEK	LLLQAIQSFEK	2	LLLQAIQSFEK2	13010.9	8206	
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	LLLQCQVTSDPPATVTWTLNGK	LLLQC(UniMod:4)QVTSDPPATVTWTLNGK	3	LLLQC(UniMod:4)QVTSDPPATVTWTLNGK3	31097.4	27919.9	24645.4
P43527	P43527	CASP1_RAT	Casp1	Caspase-1	1	LLLQDLGYTVK	LLLQDLGYTVK	2	LLLQDLGYTVK2	2624.04	3240.59	5639.21
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	LLLQEVR	LLLQEVR	2	LLLQEVR2	2.6586e+07	2.13884e+07	2.38629e+07
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	LLLQEVRLADLPGNYITK	LLLQEVRLADLPGNYITK	3	LLLQEVRLADLPGNYITK3	2112.23		3368.24
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	LLLQGLMDSVEAK	LLLQGLMDSVEAK	2	LLLQGLMDSVEAK2	8437.04	7620.52	10412.6
P51111	P51111	HD_RAT	Htt	Huntingtin	1	LLLQINSEREPGNMSYK	LLLQINSEREPGNMSYK	3	LLLQINSEREPGNMSYK3	39625.7	54719.9	55997.8
G3V901	G3V901	G3V901_RAT	Ext1	Exostosin glycosyltransferase 1	1	LLLQIPSTIR	LLLQIPSTIR	2	LLLQIPSTIR2	4267.48	11270.3	10298.9
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	LLLQLEATK	LLLQLEATK	2	LLLQLEATK2	241760	192856	201963
D3ZLN7	D3ZLN7	D3ZLN7_RAT	Commd2	COMM domain containing 2	1	LLLQLYLDNRK	LLLQLYLDNRK	3	LLLQLYLDNRK3	4318.89	2548.81	1828.33
Q05962	Q05962;A0A8I6A2W7;Q09073	ADT1_RAT	Slc25a4	ADP/ATP translocase 1	0	LLLQVQHASK	LLLQVQHASK	2	LLLQVQHASK2	427607	616516	424093
D3ZBX9	D3ZBX9	D3ZBX9_RAT	Ccdc92	Coiled-coil domain containing 92	1	LLLREPVDAMPDPTPFLLAR	LLLREPVDAMPDPTPFLLAR	3	LLLREPVDAMPDPTPFLLAR3	7380.03	9732.14	11670.9
A0A0G2K2G7	A0A0G2K2G7	A0A0G2K2G7_RAT	Anks1a	Ankyrin repeat and sterile alpha motif domain containing 1A	1	LLLSAHPNLLSCSTR	LLLSAHPNLLSC(UniMod:4)STR	3	LLLSAHPNLLSC(UniMod:4)STR3	9527.11	13578.9	9434.25
P51111	P51111	HD_RAT	Htt	Huntingtin	1	LLLSEQLSR	LLLSEQLSR	2	LLLSEQLSR2	63223.1	72735.3	56351.6
A0A8I6AAR9	A0A8I6AAR9	A0A8I6AAR9_RAT	Ankrd17	Ankyrin repeat domain 17	1	LLLSGTADGADLR	LLLSGTADGADLR	2	LLLSGTADGADLR2			3328.62
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	LLLSILGMNSWDK	LLLSILGMNSWDK	2	LLLSILGMNSWDK2	2556.74		
Q7TP48	Q7TP48	APMAP_RAT	Apmap	Adipocyte plasma membrane-associated protein	1	LLLSSETPIEGK	LLLSSETPIEGK	2	LLLSSETPIEGK2	91370.9	73203.3	70492.5
Q7TP48	Q7TP48	APMAP_RAT	Apmap	Adipocyte plasma membrane-associated protein	1	LLLSSETPIEGKK	LLLSSETPIEGKK	3	LLLSSETPIEGKK3	15549.2	10573.2	9109.16
B1H249	B1H249	B1H249_RAT	Gnpnat1	Glucosamine 6-phosphate N-acetyltransferase	1	LLLSTLTLLSK	LLLSTLTLLSK	2	LLLSTLTLLSK2	3771.28	3643.63	9010.61
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	LLLSVLPQHVAMEMK	LLLSVLPQHVAMEMK	2	LLLSVLPQHVAMEMK2	8094.27	6067.96	8501.06
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	LLLSVLPQHVAMEMK	LLLSVLPQHVAMEMK	3	LLLSVLPQHVAMEMK3	88327.1	84855.3	74106.3
Q04400	Q04400	ADCY5_RAT	Adcy5	Adenylate cyclase type 5	1	LLLSVLPR	LLLSVLPR	2	LLLSVLPR2	39947.4	37065.7	35023.7
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	LLLTAIGYGHVR	LLLTAIGYGHVR	2	LLLTAIGYGHVR2	5874.25	9115.59	2762.74
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	LLLTAIGYGHVR	LLLTAIGYGHVR	3	LLLTAIGYGHVR3	83249.3	68674.4	62468.5
Q63433	Q63433	PKN1_RAT	Pkn1	Serine/threonine-protein kinase N1	1	LLLTAQQMLQDSK	LLLTAQQMLQDSK	2	LLLTAQQMLQDSK2	5380.2	4394.73	4297.86
Q5PQN2	Q5PQN2	BFAR_RAT	Bfar	Bifunctional apoptosis regulator	1	LLLTLTEEEFSR	LLLTLTEEEFSR	2	LLLTLTEEEFSR2	2890.25	6120.3	1435.45
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	LLLTPWVK	LLLTPWVK	2	LLLTPWVK2	110538	119555	116569
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	LLLTTPAK	LLLTTPAK	2	LLLTTPAK2	44790.1	32174	27133.8
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	LLLTVDTTDDNFMPK	LLLTVDTTDDNFMPK	2	LLLTVDTTDDNFMPK2	17177	8090.44	14391.9
Q5XI55	Q5XI55	NGLY1_RAT	Ngly1	Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase	1	LLLTYADNILR	LLLTYADNILR	2	LLLTYADNILR2		4858.29	11485.2
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	LLLVFWEIVPK	LLLVFWEIVPK	2	LLLVFWEIVPK2		5660.1	9600.75
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	LLLVGAPR	LLLVGAPR	2	LLLVGAPR2	829892	902682	850196
A0A8I6A896	A0A8I6A896	A0A8I6A896_RAT	Ap4b1	AP complex subunit beta	1	LLLVGIDK	LLLVGIDK	2	LLLVGIDK2	8620.12	3577.19	7294.49
D3ZGA5	D3ZGA5	D3ZGA5_RAT	Rilp	Rab interacting lysosomal protein	1	LLLVNSELR	LLLVNSELR	2	LLLVNSELR2	48031.1		39903.6
A0A8I6AB58	A0A8I6AB58	A0A8I6AB58_RAT	Stard3nl	STARD3 N-terminal like	1	LLLVQDASER	LLLVQDASER	2	LLLVQDASER2	11974.3	20008	12064.1
Q6YDN8	Q6YDN8	Q6YDN8_RAT	Gid8	GID complex subunit 8 homolog	1	LLLWAQNELDQK	LLLWAQNELDQK	2	LLLWAQNELDQK2	12858.6	10661.6	8633.24
B2RYI0	B2RYI0	WDR91_RAT	Wdr91	WD repeat-containing protein 91	1	LLLWDTK	LLLWDTK	2	LLLWDTK2	50299.8		37745.2
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LLLWTQK	LLLWTQK	2	LLLWTQK2	105185	82788.9	112705
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	LLLYDGK	LLLYDGK	2	LLLYDGK2	56816.9	61041.2	54577
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	LLLYGLR	LLLYGLR	2	LLLYGLR2	22376.5	14473.4	13272.5
O08770	O08770	GPV_RAT	Gp5	Platelet glycoprotein V	1	LLLYSNR	LLLYSNR	2	LLLYSNR2	8670.47	13166.3	7629.48
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	LLLYYYDDVR	LLLYYYDDVR	2	LLLYYYDDVR2	37860.5	34842.2	37575.2
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	LLMDDLK	LLMDDLK	2	LLMDDLK2	42837.4	38936.4	36423.7
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	LLMDIDLK	LLMDIDLK	2	LLMDIDLK2	21433	10460.6	21125.1
M0R7E7	M0R7E7	M0R7E7_RAT	Map2k3	Mitogen activated protein kinase kinase 3	1	LLMDLDINMR	LLMDLDINMR	2	LLMDLDINMR2	7224.91	4104.45	2379.61
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	LLMFPESR	LLMFPESR	2	LLMFPESR2	81070.2	71880.4	73042.2
Q66H39	Q66H39	ABCF3_RAT	Abcf3	ATP-binding cassette sub-family F member 3	1	LLMGDLAPVR	LLMGDLAPVR	2	LLMGDLAPVR2	8056.71	13689.4	14456
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	LLMGLMVSELR	LLMGLMVSELR	2	LLMGLMVSELR2	54957	46705.1	65176.7
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	LLMGLMVSELRDHLLR	LLMGLMVSELRDHLLR	4	LLMGLMVSELRDHLLR4	4204.31	10138.4	10285.2
P51111	P51111	HD_RAT	Htt	Huntingtin	1	LLMHETQPPSHFSVSTITR	LLMHETQPPSHFSVSTITR	3	LLMHETQPPSHFSVSTITR3	2265.59	7215.24	5093.83
P51111	P51111	HD_RAT	Htt	Huntingtin	1	LLMHETQPPSHFSVSTITR	LLMHETQPPSHFSVSTITR	4	LLMHETQPPSHFSVSTITR4	36473.6	42919.9	39197.2
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	LLMHHIR	LLMHHIR	2	LLMHHIR2	5441.92	3634.11	
O08697	O08697	ARL2_RAT	Arl2	ADP-ribosylation factor-like protein 2	1	LLMLGLDNAGK	LLMLGLDNAGK	2	LLMLGLDNAGK2	89226.8	58394.6	69226.6
P27952	A0A8I5ZR18;A0A0U1RVI9;D3ZIY7;D3ZT78;P27952;A0A8I5ZSA5;A0A8I6A3D4;D3ZQW7	RS2_RAT	Rps2	Small ribosomal subunit protein uS5	0	LLMMAGIDDCYTSAR	LLMMAGIDDC(UniMod:4)YTSAR	2	LLMMAGIDDC(UniMod:4)YTSAR2	43080.2	59595.7	29637.4
F1LSX7	F1LSX7	F1LSX7_RAT	Exosc5	Exosome component 5	1	LLMSATK	LLMSATK	2	LLMSATK2	1968.82		5718.77
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	LLMSDTQHYGVTVPHTTR	LLMSDTQHYGVTVPHTTR	3	LLMSDTQHYGVTVPHTTR3	6139.6	11495.1	6430.34
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	LLMSDTQHYGVTVPHTTR	LLMSDTQHYGVTVPHTTR	4	LLMSDTQHYGVTVPHTTR4	29783.6	28609.2	18122.6
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	LLMTEVAWTK	LLMTEVAWTK	2	LLMTEVAWTK2	16787.3	16341.8	14543.3
P97943	P97943	SCRB1_RAT	Scarb1	Scavenger receptor class B member 1	1	LLMTLGLVTMGQR	LLMTLGLVTMGQR	2	LLMTLGLVTMGQR2	11551.7	8437.28	8687.5
G3V6U9	G3V6U9	SETD3_RAT	Setd3	Actin-histidine N-methyltransferase	1	LLMTVESAK	LLMTVESAK	2	LLMTVESAK2	30829.5	30692.9	32241.6
A0A8I5ZQ72	A0A8I5ZQ72;A0JPN4;D4ACQ4	A0A8I5ZQ72_RAT	Zc3h12c	Zinc finger CCCH type containing 12C	0	LLMYSFVNDK	LLMYSFVNDK	2	LLMYSFVNDK2	14109.6	7628.09	14501.1
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	LLNAFFDPK	LLNAFFDPK	2	LLNAFFDPK2	76495.2	70407.4	74763.1
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	LLNALSLNMIR	LLNALSLNMIR	2	LLNALSLNMIR2	43413.8	33214.7	37965
Q9Z272	Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	1	LLNASAYR	LLNASAYR	2	LLNASAYR2	15908.1	22805.9	38695.1
D4A5S9	D4A5S9	D4A5S9_RAT	Prpf39	Pre-mRNA processing factor 39	1	LLNAYDEHQTLLK	LLNAYDEHQTLLK	3	LLNAYDEHQTLLK3	9042.46	3432.18	18052.5
Q63616	Q63616	VP33B_RAT	Vps33b	Vacuolar protein sorting-associated protein 33B	1	LLNCSDFAFTDMAK	LLNC(UniMod:4)SDFAFTDMAK	2	LLNC(UniMod:4)SDFAFTDMAK2	5526.16	3496.65	2170.5
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	LLNDEDPVVVTK	LLNDEDPVVVTK	2	LLNDEDPVVVTK2	38466.2	31126.8	28590.2
D3Z921	D3Z921	D3Z921_RAT	Tal1	TAL bHLH transcription factor 1, erythroid differentiation factor	1	LLNDQEEEGTQR	LLNDQEEEGTQR	2	LLNDQEEEGTQR2	1367.01		1494.99
D3ZWU9	D3ZWU9	D3ZWU9_RAT	Rmnd5a	RING-type E3 ubiquitin transferase	1	LLNEVMVEHFFR	LLNEVMVEHFFR	3	LLNEVMVEHFFR3	5155.41	3210.88	7432.12
G3V9T7	G3V9T7	GET3_RAT	Get3	ATPase Get3	1	LLNFPTIVER	LLNFPTIVER	2	LLNFPTIVER2	368233	378479	409359
Q8R431	Q8R431	MGLL_RAT	Mgll	Monoglyceride lipase	1	LLNFVLPNISLGR	LLNFVLPNISLGR	2	LLNFVLPNISLGR2	19972.9	16692.6	14605
Q4V899	Q4V899	TM165_RAT	Tmem165	Transmembrane protein 165	1	LLNGPDVETGTSTAIPQK	LLNGPDVETGTSTAIPQK	2	LLNGPDVETGTSTAIPQK2	27361.9	27923.9	35279.6
Q4V899	Q4V899	TM165_RAT	Tmem165	Transmembrane protein 165	1	LLNGPDVETGTSTAIPQKK	LLNGPDVETGTSTAIPQKK	3	LLNGPDVETGTSTAIPQKK3	41919.8	36126.7	36465.9
Q9EQV6	Q9EQV6	TPP1_RAT	Tpp1	Tripeptidyl-peptidase 1	1	LLNGRPPLGFLNPR	LLNGRPPLGFLNPR	3	LLNGRPPLGFLNPR3	62518.5		65051.1
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	LLNHHPLLEEFLQEGLEGR	LLNHHPLLEEFLQEGLEGR	3	LLNHHPLLEEFLQEGLEGR3	38418.9	26380.4	11781.9
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	LLNHHPLLEEFLQEGLEGR	LLNHHPLLEEFLQEGLEGR	4	LLNHHPLLEEFLQEGLEGR4	27253.6	24752.9	27846.7
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	LLNHSLLLHK	LLNHSLLLHK	2	LLNHSLLLHK2	9018.59	5387.58	4098.71
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	LLNHSLLLHK	LLNHSLLLHK	3	LLNHSLLLHK3	338193	373368	292640
F1M386	F1M386;A0A8I5YCN5	RPGF2_RAT	Rapgef2	Rap guanine nucleotide exchange factor 2	0	LLNIACAAK	LLNIAC(UniMod:4)AAK	2	LLNIAC(UniMod:4)AAK2	24948.5	24249.6	17961.1
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	LLNIQQQLTCSLR	LLNIQQQLTC(UniMod:4)SLR	2	LLNIQQQLTC(UniMod:4)SLR2	82469.1	84396.4	75492.1
A0A8I6ANR6	A0A8I6ANR6	A0A8I6ANR6_RAT	Chuk	IkappaB kinase	1	LLNKPENCCGLK	LLNKPENC(UniMod:4)C(UniMod:4)GLK	3	LLNKPENC(UniMod:4)C(UniMod:4)GLK3	30703	14429.8	22569.8
Q99JD4	Q99JD4;F1LNQ9	CLAP2_RAT	Clasp2	CLIP-associating protein 2	0	LLNLYIK	LLNLYIK	2	LLNLYIK2	64365.9	65609.9	53207.4
A0A8I6AL00	A0A8I6AL00	A0A8I6AL00_RAT	Ndufs8	NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial	1	LLNNGDK	LLNNGDK	2	LLNNGDK2	52878.2	84995.6	
A0A8I6AC38	A0A8I6AC38	A0A8I6AC38_RAT	Wnk2	non-specific serine/threonine protein kinase	1	LLNPLVQQLK	LLNPLVQQLK	2	LLNPLVQQLK2	4016.1	5385.96	5144.65
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	LLNPQGAIR	LLNPQGAIR	2	LLNPQGAIR2	3.47927e+06	3.1259e+06	3.27806e+06
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	LLNQEEGEYYNVPIPEGDEEGNVELR	LLNQEEGEYYNVPIPEGDEEGNVELR	4	LLNQEEGEYYNVPIPEGDEEGNVELR4		5308.59	3033.45
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	LLNQPNQWPLVK	LLNQPNQWPLVK	2	LLNQPNQWPLVK2	46573.2	35044.5	45555.3
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	LLNQQVHSLTVEMK	LLNQQVHSLTVEMK	3	LLNQQVHSLTVEMK3	73265	56419.3	79775.2
P01048	P08932;P01048	KNT1_RAT	Map1	T-kininogen 1	0	LLNSCEYK	LLNSC(UniMod:4)EYK	2	LLNSC(UniMod:4)EYK2	1.62198e+06	1.5829e+06	1.56029e+06
O35346	O35346	FAK1_RAT	Ptk2	Focal adhesion kinase 1	1	LLNSDLGELISK	LLNSDLGELISK	2	LLNSDLGELISK2	13950.1	10311.6	11924
Q5XIA4	Q5XIA4	CNO10_RAT	Cnot10	CCR4-NOT transcription complex subunit 10	1	LLNSSNIAEHPGFMK	LLNSSNIAEHPGFMK	3	LLNSSNIAEHPGFMK3	4523.83	5232.11	5720.7
A0A8I6GJ42	A0A8I6GJ42	A0A8I6GJ42_RAT	Helz	Helicase with zinc finger	1	LLNTAITR	LLNTAITR	2	LLNTAITR2	4220.26	2580.84	3719.17
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LLNTFLER	LLNTFLER	2	LLNTFLER2	514513	619897	543846
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	LLNTLCR	LLNTLC(UniMod:4)R	2	LLNTLC(UniMod:4)R2	8153.78	10165.3	10609.6
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	LLNVESMK	LLNVESMK	2	LLNVESMK2	127004	132746	123441
D3ZUZ4	D3ZUZ4	D3ZUZ4_RAT	Fam20b	FAM20B, glycosaminoglycan xylosylkinase	1	LLNVLATIK	LLNVLATIK	2	LLNVLATIK2	13728.9	6969.09	12901.7
Q6AXR1	Q6AXR1	Q6AXR1_RAT	Tbc1d20	TBC1 domain family, member 20	1	LLNVNTDEPPPMSR	LLNVNTDEPPPMSR	2	LLNVNTDEPPPMSR2	3033.82	6598.57	5849.82
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	LLNWYGCVEGQQPIVR	LLNWYGC(UniMod:4)VEGQQPIVR	2	LLNWYGC(UniMod:4)VEGQQPIVR2	9550.05	5499.48	10193.7
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	LLNYVDWIK	LLNYVDWIK	2	LLNYVDWIK2	1.69657e+06	1.28039e+06	1.22284e+06
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	LLNYVDWIKK	LLNYVDWIKK	2	LLNYVDWIKK2	11215.5	7058.54	5701.03
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	LLNYVDWIKK	LLNYVDWIKK	3	LLNYVDWIKK3	103131	67272.9	48470.2
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	LLPAFHSPSGIPWALLNMK	LLPAFHSPSGIPWALLNMK	3	LLPAFHSPSGIPWALLNMK3	96162.1	86657.4	81910.1
D3ZV30	D3ZV30	D3ZV30_RAT	Polr3b	DNA-directed RNA polymerase subunit beta	1	LLPAFLK	LLPAFLK	1	LLPAFLK1	9486.32		1273
D3ZV30	D3ZV30	D3ZV30_RAT	Polr3b	DNA-directed RNA polymerase subunit beta	1	LLPAFLK	LLPAFLK	2	LLPAFLK2	505870	445282	445156
Q5XIC1	Q5XIC1	GMPPA_RAT	Gmppa	Mannose-1-phosphate guanyltransferase alpha	1	LLPAITILGCR	LLPAITILGC(UniMod:4)R	2	LLPAITILGC(UniMod:4)R2	28577	27107.3	31898.5
A0A0G2JYA7	A0A0G2JYA7	A0A0G2JYA7_RAT	Tarbp1	TAR (HIV-1) RNA binding protein 1	1	LLPALAQSAEPALR	LLPALAQSAEPALR	2	LLPALAQSAEPALR2	9962.89	8204.89	9563.29
A0A0G2JV05	A0A0G2JV05	A0A0G2JV05_RAT	Mroh1	Maestro heat-like repeat family member 1	1	LLPAVLGLYK	LLPAVLGLYK	2	LLPAVLGLYK2	7785.86	5989.72	20892.3
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	LLPAVLR	LLPAVLR	2	LLPAVLR2	23379.6	27656.1	34537.5
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	LLPDDMK	LLPDDMK	2	LLPDDMK2	62270.2	63490.5	95780.2
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	LLPDGVSK	LLPDGVSK	2	LLPDGVSK2	77680	79469.6	67722.2
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	LLPDTINSINLDR	LLPDTINSINLDR	2	LLPDTINSINLDR2	15160.9	5840.99	19991.9
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	LLPEDQWK	LLPEDQWK	2	LLPEDQWK2	142564	131278	164587
B2RYB1	B2RYB1	B2RYB1_RAT	Txndc11	Thioredoxin domain containing 11	1	LLPEDTFTVAR	LLPEDTFTVAR	2	LLPEDTFTVAR2	10046.9	14886.7	
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	LLPEFDDSDYDDVPEEGPGAPASVMTK	LLPEFDDSDYDDVPEEGPGAPASVMTK	3	LLPEFDDSDYDDVPEEGPGAPASVMTK3	16750.6	18236.7	24332.5
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	LLPEGDDESSAAVK	LLPEGDDESSAAVK	2	LLPEGDDESSAAVK2	206550	247107	212382
M0RDU0	M0RDU0	HAP40_RAT	F8a1	40-kDa huntingtin-associated protein	1	LLPEHAQTLEK	LLPEHAQTLEK	2	LLPEHAQTLEK2	11920.4	18052.1	14065.9
M0RDU0	M0RDU0	HAP40_RAT	F8a1	40-kDa huntingtin-associated protein	1	LLPEHAQTLEK	LLPEHAQTLEK	3	LLPEHAQTLEK3	95339.7	89009.8	83957.9
Q5XIA5	Q5XIA5	Q5XIA5_RAT	Coasy	Coenzyme A synthase	1	LLPELLQPYSER	LLPELLQPYSER	2	LLPELLQPYSER2	16903.8	34032.2	18846.8
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	LLPELSPEPESPHFR	LLPELSPEPESPHFR	3	LLPELSPEPESPHFR3	29019.3	46297.5	31477.7
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	LLPGEECVLDGLR	LLPGEEC(UniMod:4)VLDGLR	2	LLPGEEC(UniMod:4)VLDGLR2	10749.9	14441.1	13363.4
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	LLPGIEVLWTGPK	LLPGIEVLWTGPK	2	LLPGIEVLWTGPK2	73998.3	107131	95055.7
B1WBV3	B1WBV3	B1WBV3_RAT	Gfod2	Glucose-fructose oxidoreductase domain containing 2	1	LLPGVGVFGTGSSAR	LLPGVGVFGTGSSAR	2	LLPGVGVFGTGSSAR2	20733.2	26229.8	13006.4
Q5I6B8	Q5CZZ9;Q5I6B8;D3ZSI8	PI51C_RAT	Pip5k1c	Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma	0	LLPGYYMNLNQNPR	LLPGYYMNLNQNPR	2	LLPGYYMNLNQNPR2	59067.6	56844.5	52879.5
Q5I6B8	Q5CZZ9;Q5I6B8;D3ZSI8	PI51C_RAT	Pip5k1c	Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma	0	LLPGYYMNLNQNPR	LLPGYYMNLNQNPR	3	LLPGYYMNLNQNPR3	11225.3	8650.57	10834.3
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	LLPHMHNIVEYMLQR	LLPHMHNIVEYMLQR	3	LLPHMHNIVEYMLQR3	7187.07	11406.2	16965.5
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	LLPHMHNIVEYMLQR	LLPHMHNIVEYMLQR	4	LLPHMHNIVEYMLQR4	4419.26	9206.51	9828.53
E9PSY0	E9PSY0	E9PSY0_RAT	Axl	receptor protein-tyrosine kinase	1	LLPHTPYHIR	LLPHTPYHIR	3	LLPHTPYHIR3	10917.1	10002.3	17984.2
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	LLPIDGANDLFFQPPPLTPTSK	LLPIDGANDLFFQPPPLTPTSK	3	LLPIDGANDLFFQPPPLTPTSK3	21513	26290.1	19978.8
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	LLPIMCAYK	LLPIMC(UniMod:4)AYK	2	LLPIMC(UniMod:4)AYK2	74471.8	78289.7	72490.7
A0A0G2K687	A0A0G2K687	A0A0G2K687_RAT	Rubcn	Rubicon autophagy regulator	1	LLPIPDSLPISPDDGQHADIYK	LLPIPDSLPISPDDGQHADIYK	3	LLPIPDSLPISPDDGQHADIYK3	14798.7	15137.8	18827.4
A0A0G2K5N0	D4ABZ4;A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	0	LLPLATTGDGNCLLHAASLGMWGFHDR	LLPLATTGDGNC(UniMod:4)LLHAASLGMWGFHDR	4	LLPLATTGDGNC(UniMod:4)LLHAASLGMWGFHDR4	5038.08	4442.54	7775.6
Q641Z6	Q641Z6;Q4V8H8	EHD1_RAT	Ehd1	EH domain-containing protein 1	0	LLPLEEHYR	LLPLEEHYR	2	LLPLEEHYR2	29114.4		13238.2
Q641Z6	Q641Z6;Q4V8H8	EHD1_RAT	Ehd1	EH domain-containing protein 1	0	LLPLEEHYR	LLPLEEHYR	3	LLPLEEHYR3	73314.4	77226.7	78602.8
Q8R491	Q8R491	EHD3_RAT	Ehd3	EH domain-containing protein 3	1	LLPLEEYYR	LLPLEEYYR	2	LLPLEEYYR2	841364	763696	891472
A0A0G2K5N0	D4ABZ4;A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	0	LLPLHFAVDPGK	LLPLHFAVDPGK	3	LLPLHFAVDPGK3	48866.5	35045.7	57466.2
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	LLPLPLGVR	LLPLPLGVR	2	LLPLPLGVR2	14411.1	20749.4	11367
Q6AXW1	Q6AXW1	GLRX2_RAT	Glrx2	Glutaredoxin-2, mitochondrial	1	LLPLVHQCYLNK	LLPLVHQC(UniMod:4)YLNK	3	LLPLVHQC(UniMod:4)YLNK3	29457.4	22442.8	16628.7
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	LLPLVIAFR	LLPLVIAFR	2	LLPLVIAFR2	4394.51	6287.08	6693.74
Q66H63	Q66H63	GDAP2_RAT	Gdap2	Ganglioside-induced differentiation-associated-protein 2	1	LLPLYFPR	LLPLYFPR	2	LLPLYFPR2	84228.9	90299.1	73097.4
A0A0G2JU49	A0A0G2JU49	A0A0G2JU49_RAT	Mtx1	Metaxin 1	1	LLPMLIHTFWIDAK	LLPMLIHTFWIDAK	3	LLPMLIHTFWIDAK3	19674.5	9572.72	22478.5
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	LLPMQVDGEPWMQPPCMIK	LLPMQVDGEPWMQPPC(UniMod:4)MIK	3	LLPMQVDGEPWMQPPC(UniMod:4)MIK3	31060.1	24293.1	31275.6
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	LLPNMLSPDPR	LLPNMLSPDPR	2	LLPNMLSPDPR2	531804	538603	496855
D3ZM21	D3ZM21	D3ZM21_RAT	Comtd1	Catechol-O-methyltransferase domain containing 1	1	LLPPQDNPLWQYLLSR	LLPPQDNPLWQYLLSR	2	LLPPQDNPLWQYLLSR2	35506.8	47242.6	38982.3
D3ZM21	D3ZM21	D3ZM21_RAT	Comtd1	Catechol-O-methyltransferase domain containing 1	1	LLPPQDNPLWQYLLSR	LLPPQDNPLWQYLLSR	3	LLPPQDNPLWQYLLSR3	6242.29	3493.89	5899.65
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LLPQAETFEQLSSK	LLPQAETFEQLSSK	2	LLPQAETFEQLSSK2	145199	198654	178766
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LLPQAETFEQLSSK	LLPQAETFEQLSSK	3	LLPQAETFEQLSSK3	4988.61	7017.91	13699.1
P57113	P57113	MAAI_RAT	Gstz1	Maleylacetoacetate isomerase	1	LLPQDPQK	LLPQDPQK	2	LLPQDPQK2	34655.1	37894.4	27143.4
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	LLPQTTPENVSK	LLPQTTPENVSK	2	LLPQTTPENVSK2	39808.9	40099.1	25844.4
P49911	P49911	AN32A_RAT	Anp32a	Acidic leucine-rich nuclear phosphoprotein 32 family member A	1	LLPQVMYLDGYDR	LLPQVMYLDGYDR	2	LLPQVMYLDGYDR2	88123.1	62915	77761.6
P49911	P49911	AN32A_RAT	Anp32a	Acidic leucine-rich nuclear phosphoprotein 32 family member A	1	LLPQVMYLDGYDRDNK	LLPQVMYLDGYDRDNK	2	LLPQVMYLDGYDRDNK2	13209.2	15114.7	18795.5
P49911	P49911	AN32A_RAT	Anp32a	Acidic leucine-rich nuclear phosphoprotein 32 family member A	1	LLPQVMYLDGYDRDNK	LLPQVMYLDGYDRDNK	3	LLPQVMYLDGYDRDNK3	164495	232741	198787
Q5RJM1	Q5RJM1	PORED_RAT	Srd5a3	Polyprenol reductase	1	LLPSCALFQDLIR	LLPSC(UniMod:4)ALFQDLIR	2	LLPSC(UniMod:4)ALFQDLIR2	6929.56	6813.4	9309.33
Q925Q9	Q925Q9	SH3K1_RAT	Sh3kbp1	SH3 domain-containing kinase-binding protein 1	1	LLPSDFDKEGNRPK	LLPSDFDKEGNRPK	4	LLPSDFDKEGNRPK4	6381.13	3761.36	2782.28
A0A8I6AKB0	A0A8I6AKB0	A0A8I6AKB0_RAT	Asmtl	Acetylserotonin O-methyltransferase-like	1	LLPSGPGQEVESQT	LLPSGPGQEVESQT	2	LLPSGPGQEVESQT2	5144.06	2081.44	1146.83
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	LLPSGSQK	LLPSGSQK	2	LLPSGSQK2	378671	393280	399880
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	LLPSSGPSAAEVSTAEEPSSPSTPTR	LLPSSGPSAAEVSTAEEPSSPSTPTR	3	LLPSSGPSAAEVSTAEEPSSPSTPTR3	19546.5	28445.6	30285.7
A0A096MK24	A0A096MK24	A0A096MK24_RAT	Morc4	Microrchidia 4	1	LLPSVGEESR	LLPSVGEESR	2	LLPSVGEESR2	19487.5	12542.5	18963.5
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	LLPVFAQTFQHTMLPSIR	LLPVFAQTFQHTMLPSIR	3	LLPVFAQTFQHTMLPSIR3	16150.9	12680	18098.5
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	LLPVLQEALSAYLDSMR	LLPVLQEALSAYLDSMR	2	LLPVLQEALSAYLDSMR2	85210.5	96315.5	59839.5
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	LLPVLQEALSAYLDSMR	LLPVLQEALSAYLDSMR	3	LLPVLQEALSAYLDSMR3	2529.13	1305.34	1301.5
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	LLPVYLNCVLK	LLPVYLNC(UniMod:4)VLK	2	LLPVYLNC(UniMod:4)VLK2	39165.9	28804	37578.3
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	LLPWEDPNAPEK	LLPWEDPNAPEK	2	LLPWEDPNAPEK2	35193.4	33434.4	37538.8
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	LLPYAER	LLPYAER	2	LLPYAER2	70995.8	91619.7	
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	LLPYEQSSLLELIK	LLPYEQSSLLELIK	2	LLPYEQSSLLELIK2	39885.6	46126.8	52096.7
Q63448	Q63448	ACOX3_RAT	Acox3	Peroxisomal acyl-coenzyme A oxidase 3	1	LLPYLAAAYALDHFSK	LLPYLAAAYALDHFSK	3	LLPYLAAAYALDHFSK3	4863.74	6315.25	12465.6
Q6QMY6	Q6QMY6	TSK_RAT	Tsku	Tsukushi	1	LLPYPAR	LLPYPAR	2	LLPYPAR2	355369	292515	291181
Q9JJM7	Q9JJM7	GP1BB_RAT	Gp1bb	Platelet glycoprotein Ib beta chain	1	LLPYVAEDELR	LLPYVAEDELR	2	LLPYVAEDELR2	1.2277e+07	1.25928e+07	1.36211e+07
Q9JJM7	Q9JJM7	GP1BB_RAT	Gp1bb	Platelet glycoprotein Ib beta chain	1	LLPYVAEDELR	LLPYVAEDELR	3	LLPYVAEDELR3	59970.7	53502.6	55780.2
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	LLQAAAGASAR	LLQAAAGASAR	2	LLQAAAGASAR2	18569.6	18621.9	14807.3
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	LLQAAYLSK	LLQAAYLSK	2	LLQAAYLSK2	87572	96908.4	94814.9
D3ZDE4	D3ZDE4	D3ZDE4_RAT	Dguok	Deoxyguanosine kinase	1	LLQADTSVR	LLQADTSVR	2	LLQADTSVR2	36094	24704.8	31075.6
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	LLQAETER	LLQAETER	2	LLQAETER2	95067.5	94576.8	97785.9
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	LLQAETERLEGWCCQMDK	LLQAETERLEGWC(UniMod:4)C(UniMod:4)QMDK	3	LLQAETERLEGWC(UniMod:4)C(UniMod:4)QMDK3	18970.1	13305.8	12833.1
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	LLQAETERLEGWCCQMDKETK	LLQAETERLEGWC(UniMod:4)C(UniMod:4)QMDKETK	3	LLQAETERLEGWC(UniMod:4)C(UniMod:4)QMDKETK3	4601.11	3785.67	
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	LLQAFLER	LLQAFLER	2	LLQAFLER2	35134.5	30041.5	36772.1
G3V784	G3V784	G3V784_RAT	Adpgk	ADP-dependent glucokinase	1	LLQALGLSPGSGR	LLQALGLSPGSGR	2	LLQALGLSPGSGR2	43666.5	37802.8	49897.3
P28840	P28840	NEC1_RAT	Pcsk1	Neuroendocrine convertase 1	1	LLQALMDILNEKN	LLQALMDILNEKN	2	LLQALMDILNEKN2	8228.48	8870.69	8848.18
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	LLQAPFTDCGDGPMLR	LLQAPFTDC(UniMod:4)GDGPMLR	2	LLQAPFTDC(UniMod:4)GDGPMLR2	84669.7	79644.6	82762.1
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	LLQASFK	LLQASFK	1	LLQASFK1	5044.93	2112.32	2598.25
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	LLQASFK	LLQASFK	2	LLQASFK2	933017	1.21548e+06	1.01875e+06
G3V8G2	G3V8G2	G3V8G2_RAT	Psmd5	26S proteasome non-ATPase regulatory subunit 5	1	LLQAVEPIHLAR	LLQAVEPIHLAR	2	LLQAVEPIHLAR2	2929.12	1423.83	799.847
G3V8G2	G3V8G2	G3V8G2_RAT	Psmd5	26S proteasome non-ATPase regulatory subunit 5	1	LLQAVEPIHLAR	LLQAVEPIHLAR	3	LLQAVEPIHLAR3	38105.6	47355.1	33374.3
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	LLQAYINR	LLQAYINR	2	LLQAYINR2	22965.4	13391.4	12487.4
P62749	P84076;P62749	HPCL1_RAT	Hpcal1	Hippocalcin-like protein 1	0	LLQCDPSSASQF	LLQC(UniMod:4)DPSSASQF	2	LLQC(UniMod:4)DPSSASQF2	13196.5	10556	11574.4
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	LLQCYPPPEDAAVK	LLQC(UniMod:4)YPPPEDAAVK	2	LLQC(UniMod:4)YPPPEDAAVK2	53480.2	60573.3	39436.1
A0A8I6A5W7	A0A8I6A5W7	A0A8I6A5W7_RAT	Ccdc88a	Coiled coil domain containing 88A	1	LLQDEQSTDDSR	LLQDEQSTDDSR	2	LLQDEQSTDDSR2	3242.32	1526.21	3683.23
P14659	P14659;P63018;M0RCB1	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	0	LLQDFFNGK	LLQDFFNGK	2	LLQDFFNGK2	1.25419e+06	1.37874e+06	1.38474e+06
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	LLQDMDINR	LLQDMDINR	2	LLQDMDINR2	54814.4	59579.5	57834.7
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	LLQDNNVMFNTEPPAGTR	LLQDNNVMFNTEPPAGTR	3	LLQDNNVMFNTEPPAGTR3	8926.65	10348	10163.7
O08774	O08774	RGS12_RAT	Rgs12	Regulator of G-protein signaling 12	1	LLQDPVGVR	LLQDPVGVR	2	LLQDPVGVR2	14353.1	11503.9	16805.8
D3ZI07	O55165;D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	0	LLQDSLGGNAK	LLQDSLGGNAK	2	LLQDSLGGNAK2	19368.9	17960.3	22066.6
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	LLQDSLGGNSK	LLQDSLGGNSK	2	LLQDSLGGNSK2	23713.9	17248	24827.7
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	LLQDTVQQLMLPHGR	LLQDTVQQLMLPHGR	3	LLQDTVQQLMLPHGR3	10887.2	4199.45	8397.97
D4AEG7	D4AEG7	D4AEG7_RAT	Tbc1d13	TBC1 domain family, member 13	1	LLQDYPISDVCK	LLQDYPISDVC(UniMod:4)K	2	LLQDYPISDVC(UniMod:4)K2	6850.8	8933.39	6092.23
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	LLQEAEQR	LLQEAEQR	2	LLQEAEQR2	31929.5	34839	41557.9
A0A0G2JYJ5	A0A0G2JYJ5	A0A0G2JYJ5_RAT	Ap5z1	Adaptor related protein complex 5 subunit zeta 1	1	LLQEAPGPATVDALQR	LLQEAPGPATVDALQR	2	LLQEAPGPATVDALQR2	7604.74	5895.48	
A0A8I5ZXL6	A0A8I5ZXL6	A0A8I5ZXL6_RAT	Plekha7	Pleckstrin homology domain containing A7	1	LLQEDLVHIR	LLQEDLVHIR	3	LLQEDLVHIR3	5503.81	1786.61	5006.28
D3ZCK4	D3ZCK4	D3ZCK4_RAT	Def6	DEF6 guanine nucleotide exchange factor	1	LLQEEEER	LLQEEEER	2	LLQEEEER2	26693.6	10732.5	17485.3
P14270	P14270	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	1	LLQEENCDIFQNLTK	LLQEENC(UniMod:4)DIFQNLTK	2	LLQEENC(UniMod:4)DIFQNLTK2	15949.6	10126.3	16364.7
P14270	P14270	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	1	LLQEENCDIFQNLTK	LLQEENC(UniMod:4)DIFQNLTK	3	LLQEENC(UniMod:4)DIFQNLTK3	2782.28		
D4A2H2	D4A2H2	SPTC1_RAT	Sptlc1	Serine palmitoyltransferase 1	1	LLQEIVEQCMNK	LLQEIVEQC(UniMod:4)MNK	2	LLQEIVEQC(UniMod:4)MNK2	987.93		1912.86
D3ZBX9	D3ZBX9	D3ZBX9_RAT	Ccdc92	Coiled-coil domain containing 92	1	LLQELEQK	LLQELEQK	2	LLQELEQK2	47947	48620.8	55636
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	LLQELLLDWK	LLQELLLDWK	2	LLQELLLDWK2	1909.35	3363.94	1775.72
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LLQELLNMAVEGDHSMHPPPPIR	LLQELLNMAVEGDHSMHPPPPIR	3	LLQELLNMAVEGDHSMHPPPPIR3	27425.5	18134.8	20407.6
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LLQELLNMAVEGDHSMHPPPPIR	LLQELLNMAVEGDHSMHPPPPIR	4	LLQELLNMAVEGDHSMHPPPPIR4	82167.6	81736.5	98782.4
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	LLQELNATQFNITDEIMSQFPSSK	LLQELNATQFNITDEIMSQFPSSK	3	LLQELNATQFNITDEIMSQFPSSK3	164616	161842	173766
M0R9J2	M0R9J2	M0R9J2_RAT	Pigg	GPI ethanolamine phosphate transferase 2	1	LLQENIPAYEKDPGFEQFK	LLQENIPAYEKDPGFEQFK	3	LLQENIPAYEKDPGFEQFK3	9757.93	6750.75	3765.18
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	LLQEQQEQAAK	LLQEQQEQAAK	2	LLQEQQEQAAK2	21031.6	23277.1	24169.2
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	LLQEYCAETGAK	LLQEYC(UniMod:4)AETGAK	2	LLQEYC(UniMod:4)AETGAK2	37048.6	52433.1	48592.6
Q63686	Q63686	CDK16_RAT	Cdk16	Cyclin-dependent kinase 16	1	LLQFEGR	LLQFEGR	2	LLQFEGR2	45478.8	20001.8	15988
F1M086	F1M7K9;F1M086	F1M086_RAT	Elp4	Elongator complex protein 4	0	LLQFFQNIIYTEGFDGANPQK	LLQFFQNIIYTEGFDGANPQK	3	LLQFFQNIIYTEGFDGANPQK3	6892.78	3993.39	9017.47
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	LLQFLSIVAR	LLQFLSIVAR	2	LLQFLSIVAR2	5257.32	3634.92	9463.32
A0A0G2K612	A0A0G2K612	A0A0G2K612_RAT	Smurf1	E3 ubiquitin-protein ligase	1	LLQFVTGSTR	LLQFVTGSTR	2	LLQFVTGSTR2	372146	420513	391131
A0A0G2K9T1	B4F767;F7FIK1;A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	0	LLQFVTGTCR	LLQFVTGTC(UniMod:4)R	2	LLQFVTGTC(UniMod:4)R2	93472.1	99269.5	100562
Q62940	Q62940;A0A8I6AEH7	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	0	LLQFVTGTSR	LLQFVTGTSR	2	LLQFVTGTSR2	372146	420513	391131
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	LLQFWEPLGETR	LLQFWEPLGETR	2	LLQFWEPLGETR2	156796	158364	152904
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	LLQFWEPLGETR	LLQFWEPLGETR	3	LLQFWEPLGETR3	2077.55	6387.75	4212.37
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	LLQFYAETCPAPER	LLQFYAETC(UniMod:4)PAPER	2	LLQFYAETC(UniMod:4)PAPER2	73090.6	89757.5	62147.7
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	LLQFYAETCPAPER	LLQFYAETC(UniMod:4)PAPER	3	LLQFYAETC(UniMod:4)PAPER3	39000	48099.5	18413.5
A1L1J9	A1L1J9	LMF2_RAT	Lmf2	Lipase maturation factor 2	1	LLQGKEPVIR	LLQGKEPVIR	3	LLQGKEPVIR3	9499.51	17627.9	7940.92
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	LLQGRPPLDFYPPGVHPSGLVPR	LLQGRPPLDFYPPGVHPSGLVPR	4	LLQGRPPLDFYPPGVHPSGLVPR4	40884.1	32478.2	32029.2
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	LLQGVAGLK	LLQGVAGLK	2	LLQGVAGLK2	106808	89978.7	97617.2
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	LLQHGINADDK	LLQHGINADDK	2	LLQHGINADDK2	4081.35	9204.09	
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	LLQHGINADDK	LLQHGINADDK	3	LLQHGINADDK3	45619.2	54444.7	53688.4
D3ZXB1	D3ZXB1	D3ZXB1_RAT	Map4k2	Mitogen-activated protein kinase kinase kinase kinase 2	1	LLQHPFTTQPLPPALLTQLLDK	LLQHPFTTQPLPPALLTQLLDK	3	LLQHPFTTQPLPPALLTQLLDK3	18599.1	24088	30455.5
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	LLQIIDTTLLK	LLQIIDTTLLK	2	LLQIIDTTLLK2	21456.9	12098.8	6032.54
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	LLQISSFNGK	LLQISSFNGK	2	LLQISSFNGK2	64549.8	63216.8	70818.5
A0A8I5Y8A9	A0A8I5Y8A9	A0A8I5Y8A9_RAT	Gltpd2	Glycolipid transfer protein domain containing 2	1	LLQLACPGTGEADAR	LLQLAC(UniMod:4)PGTGEADAR	2	LLQLAC(UniMod:4)PGTGEADAR2	48585.2	46693.4	45829.2
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	LLQLCQR	LLQLC(UniMod:4)QR	2	LLQLC(UniMod:4)QR2	17294.7	8123.28	6964.61
Q641X7	Q641X7	FBX25_RAT	Fbxo25	F-box only protein 25	1	LLQLIAK	LLQLIAK	2	LLQLIAK2	9356.27	12390.5	6782.18
D4ABM5	D4ABM5	D4ABM5_RAT	Mrps34	Mitochondrial ribosomal protein S34	1	LLQLLAR	LLQLLAR	2	LLQLLAR2	19382.9	17817.8	13895.6
A0A0G2JYI7	A0A0G2JYI7	A0A0G2JYI7_RAT	Ubap2	Ubiquitin-associated protein 2	1	LLQLPTMAVENIVSAHQPQPK	LLQLPTMAVENIVSAHQPQPK	3	LLQLPTMAVENIVSAHQPQPK3		13183.2	7505.5
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	LLQLQEQMR	LLQLQEQMR	2	LLQLQEQMR2	30832.9	7135.1	16408
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	LLQLQNFNTLMAVVGGLSHSSISR	LLQLQNFNTLMAVVGGLSHSSISR	3	LLQLQNFNTLMAVVGGLSHSSISR3	22055.8	44369.6	23203.6
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	LLQLSCNGNVK	LLQLSC(UniMod:4)NGNVK	2	LLQLSC(UniMod:4)NGNVK2	11193.3	13421.9	10310.1
A0A8I6AQN7	A0A8I6AQN7	A0A8I6AQN7_RAT	Fcamr	Fc fragment of IgA and IgM receptor	1	LLQLSLGDTGLYR	LLQLSLGDTGLYR	2	LLQLSLGDTGLYR2	6737.67	4686.57	7811.42
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LLQLTEK	LLQLTEK	1	LLQLTEK1	3297.74	3190.22	1697.84
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LLQLTEK	LLQLTEK	2	LLQLTEK2	932771	895931	916667
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	LLQMADVAVYGVEVPGAEGR	LLQMADVAVYGVEVPGAEGR	3	LLQMADVAVYGVEVPGAEGR3	14196.6	9399.08	10975.7
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	LLQMPSVVNYSGLR	LLQMPSVVNYSGLR	2	LLQMPSVVNYSGLR2	716752	540184	590664
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	LLQMPSVVNYSGLR	LLQMPSVVNYSGLR	3	LLQMPSVVNYSGLR3	24047.8	25572.9	37383.2
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	LLQMPSVVNYSGLRK	LLQMPSVVNYSGLRK	2	LLQMPSVVNYSGLRK2	11876.5	8946.59	6576.45
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	LLQMPSVVNYSGLRK	LLQMPSVVNYSGLRK	3	LLQMPSVVNYSGLRK3	138328	182295	187806
F1LU27	F1LU27	F1LU27_RAT	Focad	Focadhesin	1	LLQMQASR	LLQMQASR	2	LLQMQASR2	12404.1	16642.1	16467.8
A0A8I6ABN1	A0A8I6ABN1	A0A8I6ABN1_RAT	Snx19	Sorting nexin 19	1	LLQMQPAEVPDKEPQQVPK	LLQMQPAEVPDKEPQQVPK	3	LLQMQPAEVPDKEPQQVPK3	13460.9	15704.4	9500.25
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	LLQMQPAQHGEIIK	LLQMQPAQHGEIIK	2	LLQMQPAQHGEIIK2	15633.1	18065.3	20966.1
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	LLQMQPAQHGEIIK	LLQMQPAQHGEIIK	3	LLQMQPAQHGEIIK3	107333	157734	143347
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	LLQNCSDDSLNVALPMR	LLQNC(UniMod:4)SDDSLNVALPMR	2	LLQNC(UniMod:4)SDDSLNVALPMR2	16583.6	14216.9	11042.9
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	LLQNCSDDSLNVALPMR	LLQNC(UniMod:4)SDDSLNVALPMR	3	LLQNC(UniMod:4)SDDSLNVALPMR3	10889.5	13387.6	12639.7
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	LLQNQIQQQTWTDEGTPSMR	LLQNQIQQQTWTDEGTPSMR	3	LLQNQIQQQTWTDEGTPSMR3	9009.16	8496.03	11254.8
Q9QUR2	Q9QUR2	DCTN4_RAT	Dctn4	Dynactin subunit 4	1	LLQPDLQPVSASQLYPR	LLQPDLQPVSASQLYPR	2	LLQPDLQPVSASQLYPR2	75199.8	76220.1	82596.4
Q9QUR2	Q9QUR2	DCTN4_RAT	Dctn4	Dynactin subunit 4	1	LLQPDLQPVSASQLYPR	LLQPDLQPVSASQLYPR	3	LLQPDLQPVSASQLYPR3	20523.6	25589	25630
Q4V896	Q4V896	SNX15_RAT	Snx15	Sorting nexin-15	1	LLQPLPAER	LLQPLPAER	2	LLQPLPAER2	5925.68		7707.13
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	LLQPPAPIMPLDTNWPLLTVSK	LLQPPAPIMPLDTNWPLLTVSK	3	LLQPPAPIMPLDTNWPLLTVSK3	35296.1	48448	41063.3
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	LLQPVIVSPSGTILR	LLQPVIVSPSGTILR	2	LLQPVIVSPSGTILR2	111039	101306	99406.4
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	LLQPVIVSPSGTILR	LLQPVIVSPSGTILR	3	LLQPVIVSPSGTILR3	11088.6	12520.5	17070.8
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	LLQQDTFYVIELDAGMQSR	LLQQDTFYVIELDAGMQSR	3	LLQQDTFYVIELDAGMQSR3	34329	30584.2	23137.1
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	LLQQLAMTGTEEGDPR	LLQQLAMTGTEEGDPR	2	LLQQLAMTGTEEGDPR2	14889.6	16308.1	8198
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	LLQQLAMTGTEEGDPR	LLQQLAMTGTEEGDPR	3	LLQQLAMTGTEEGDPR3		4007.44	2182.98
D4ADT7	D4ADT7	D4ADT7_RAT	Nod1	Nucleotide-binding oligomerization domain containing 1	1	LLQQLVPK	LLQQLVPK	2	LLQQLVPK2	15229.4	10389.9	11838.2
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	LLQQMLKPGSDPEEGDEALK	LLQQMLKPGSDPEEGDEALK	3	LLQQMLKPGSDPEEGDEALK3	18899.2	21822.3	14691.1
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LLQQNGLSAGLAPK	LLQQNGLSAGLAPK	2	LLQQNGLSAGLAPK2	8904.27	13164.9	7041.61
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	LLQQQSLPQTGEQELESLVLK	LLQQQSLPQTGEQELESLVLK	3	LLQQQSLPQTGEQELESLVLK3		8987.97	4874.29
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	LLQQQSNQSSQFLQSVER	LLQQQSNQSSQFLQSVER	3	LLQQQSNQSSQFLQSVER3	60290.4	54316.2	59129.3
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	LLQQVAQIYQSIEFSR	LLQQVAQIYQSIEFSR	2	LLQQVAQIYQSIEFSR2	13838	18301.4	26474.6
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	LLQQVAQIYQSIEFSR	LLQQVAQIYQSIEFSR	3	LLQQVAQIYQSIEFSR3	15384.2	16278.5	19408.7
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	LLQSAQPVR	LLQSAQPVR	2	LLQSAQPVR2	9804.79	12947.4	10615.5
D3ZC54	D3ZC54	D3ZC54_RAT	AABR07065823.2	Ig-like domain-containing protein	1	LLQSGAALVK	LLQSGAALVK	2	LLQSGAALVK2	51909.7	42903.6	41760.4
D3ZC54	D3ZC54	D3ZC54_RAT	AABR07065823.2	Ig-like domain-containing protein	1	LLQSGAALVKPGASVK	LLQSGAALVKPGASVK	2	LLQSGAALVKPGASVK2	26961	14428.5	16617.5
D3ZC54	D3ZC54	D3ZC54_RAT	AABR07065823.2	Ig-like domain-containing protein	1	LLQSGAALVKPGASVK	LLQSGAALVKPGASVK	3	LLQSGAALVKPGASVK3	533859	617965	495105
M0R692	M0R692	M0R692_RAT	ENSRNOG00000069250	Ig-like domain-containing protein	1	LLQSGAELVKPGASVK	LLQSGAELVKPGASVK	2	LLQSGAELVKPGASVK2	14587.5	7818.16	7326.23
M0R692	M0R692	M0R692_RAT	ENSRNOG00000069250	Ig-like domain-containing protein	1	LLQSGAELVKPGASVK	LLQSGAELVKPGASVK	3	LLQSGAELVKPGASVK3	452930	434183	449822
D3ZY51	D3ZY51	D3ZY51_RAT	Pkp1	Plakophilin 1	1	LLQSGNSDVVR	LLQSGNSDVVR	2	LLQSGNSDVVR2	12093.3	5374.75	7627.54
Q6P7B4	Q6P7B4	GAK1B_RAT	Gask1b	Golgi-associated kinase 1B	1	LLQSLFLDQVYWESQGGR	LLQSLFLDQVYWESQGGR	3	LLQSLFLDQVYWESQGGR3	4838.87	5028.56	5156.17
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	LLQSLGLK	LLQSLGLK	2	LLQSLGLK2	273519	318105	295791
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	LLQSLLDTR	LLQSLLDTR	2	LLQSLLDTR2	325257	392592	293382
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	LLQSLSR	LLQSLSR	2	LLQSLSR2	124390	166328	132521
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	LLQSNPVLEAFGNAK	LLQSNPVLEAFGNAK	2	LLQSNPVLEAFGNAK2	247267	275767	218869
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	LLQSNPVLEAFGNAK	LLQSNPVLEAFGNAK	3	LLQSNPVLEAFGNAK3	10475.7	7104.46	13220.6
F7EWF8	F7EWF8	F7EWF8_RAT	Anapc2	Anaphase-promoting complex subunit 2	1	LLQSPLCAGCGSDK	LLQSPLC(UniMod:4)AGC(UniMod:4)GSDK	2	LLQSPLC(UniMod:4)AGC(UniMod:4)GSDK2	14775.4	9567.68	12568.7
A0A8I6AGL0	A0A8I6AGL0	A0A8I6AGL0_RAT	Ankrd44	Ankyrin repeat domain 44	1	LLQSSGADFHK	LLQSSGADFHK	3	LLQSSGADFHK3	2600.51	3728.23	
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	LLQSSLPCDIHLVNLR	LLQSSLPC(UniMod:4)DIHLVNLR	3	LLQSSLPC(UniMod:4)DIHLVNLR3	32957.5	45318	41608.1
Q7M733	Q7M733	HPS6_RAT	Hps6	BLOC-2 complex member HPS6	1	LLQSTELCPDGGAR	LLQSTELC(UniMod:4)PDGGAR	2	LLQSTELC(UniMod:4)PDGGAR2	2331.38		4616.11
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	LLQTAATAAQQGGQANHPTAAVVTEK	LLQTAATAAQQGGQANHPTAAVVTEK	3	LLQTAATAAQQGGQANHPTAAVVTEK3	43481	53918.7	31595.9
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	LLQTAATAAQQGGQANHPTAAVVTEK	LLQTAATAAQQGGQANHPTAAVVTEK	4	LLQTAATAAQQGGQANHPTAAVVTEK4	10349.2	11418.9	12795.9
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	LLQTDDEEEAGLLELLK	LLQTDDEEEAGLLELLK	2	LLQTDDEEEAGLLELLK2	8080.77	10543.1	3789.06
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	LLQTDDEEEAGLLELLK	LLQTDDEEEAGLLELLK	3	LLQTDDEEEAGLLELLK3	19511	11544.6	
D3ZG57	D3ZG57	D3ZG57_RAT	Tor4a	Torsin family 4, member A	1	LLQTGTEPSVGTGTLGSSASLGTLR	LLQTGTEPSVGTGTLGSSASLGTLR	3	LLQTGTEPSVGTGTLGSSASLGTLR3	14337.7	16471.1	21359.5
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	LLQTHFK	LLQTHFK	2	LLQTHFK2	22676.2	20546.2	20130.8
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	LLQTIGK	LLQTIGK	2	LLQTIGK2	149098	136484	147701
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	LLQTILK	LLQTILK	2	LLQTILK2	28449.2	25256.5	24568.4
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	LLQTLPQLR	LLQTLPQLR	2	LLQTLPQLR2	108679	125154	106800
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	LLQTMNLTQK	LLQTMNLTQK	2	LLQTMNLTQK2	38861.6	39673.1	43337.7
Q7TP54	Q7TP54	RIPR2_RAT	Ripor2	Rho family-interacting cell polarization regulator 2	1	LLQTMSDLAPSNLPAQQEVLR	LLQTMSDLAPSNLPAQQEVLR	3	LLQTMSDLAPSNLPAQQEVLR3	3310	3405.32	9612.85
Q64303	Q64303;Q62829;P35465	PAK2_RAT	Pak2	Serine/threonine-protein kinase PAK 2	0	LLQTSNITK	LLQTSNITK	2	LLQTSNITK2	102280	79090.8	75427.9
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	LLQTTNNSPMNSK	LLQTTNNSPMNSK	2	LLQTTNNSPMNSK2		3725.21	4869.3
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	LLQTTNNSPMNSKPQQIK	LLQTTNNSPMNSKPQQIK	3	LLQTTNNSPMNSKPQQIK3	51394.9	59888.9	52199.8
D3ZPA1	D3ZPA1	D3ZPA1_RAT	Gcc1	GRIP and coiled-coil domain containing 1	1	LLQVAAR	LLQVAAR	2	LLQVAAR2	13748	9911.42	11646.5
P31325	P31325	PHKG2_RAT	Phkg2	Phosphorylase b kinase gamma catalytic chain, liver/testis isoform	1	LLQVDPNAR	LLQVDPNAR	2	LLQVDPNAR2	19137.8	29074.8	29805.3
Q5QE80	Q5QE80	AOXC_RAT	Aox3	Aldehyde oxidase 3	1	LLQVLEDFPLTMPHGTQSFK	LLQVLEDFPLTMPHGTQSFK	3	LLQVLEDFPLTMPHGTQSFK3	5930.17		5887.63
D4A0C3	D4A0C3	D4A0C3_RAT	Hid1	HID1 domain containing	1	LLQVLVPQVEK	LLQVLVPQVEK	2	LLQVLVPQVEK2	4621.17	3939.14	
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LLQVSVEDR	LLQVSVEDR	2	LLQVSVEDR2	169409	150880	186815
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	LLQVTPADSGEYVCR	LLQVTPADSGEYVC(UniMod:4)R	2	LLQVTPADSGEYVC(UniMod:4)R2	46179.4	53008	71904.1
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	LLQVTPADSGEYVCR	LLQVTPADSGEYVC(UniMod:4)R	3	LLQVTPADSGEYVC(UniMod:4)R3	8466.44	9410.13	10006.4
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LLQWEQSEQVK	LLQWEQSEQVK	2	LLQWEQSEQVK2	83387.7	91014.7	75358.3
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LLQWEQSEQVK	LLQWEQSEQVK	3	LLQWEQSEQVK3	9454.7	14168.5	12283.4
D3ZMA2	D3ZMA2	D3ZMA2_RAT	Mtmr14	Myotubularin related protein 14	1	LLQYLSVK	LLQYLSVK	2	LLQYLSVK2	28429.8	26293.4	22950.5
O35162	O35162	HSP13_RAT	Hspa13	Heat shock 70 kDa protein 13	1	LLQYLYK	LLQYLYK	2	LLQYLYK2	24131.3	32306.9	22367.3
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	LLQYNCPTEHVDLQGR	LLQYNC(UniMod:4)PTEHVDLQGR	3	LLQYNC(UniMod:4)PTEHVDLQGR3	35913.8	26491.1	28207.9
Q561S0	A0A1W2Q6F8;Q561S0	NDUAA_RAT	Ndufa10	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial	0	LLQYSDALEHLLSTGQGVVLER	LLQYSDALEHLLSTGQGVVLER	3	LLQYSDALEHLLSTGQGVVLER3		24642.8	20142.7
Q561S0	A0A1W2Q6F8;Q561S0	NDUAA_RAT	Ndufa10	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial	0	LLQYSDALEHLLSTGQGVVLER	LLQYSDALEHLLSTGQGVVLER	4	LLQYSDALEHLLSTGQGVVLER4	6028.97	4608.04	7208.14
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	LLQYTSQICK	LLQYTSQIC(UniMod:4)K	2	LLQYTSQIC(UniMod:4)K2	54020.7	58662.7	41542.5
Q561Q9	Q561Q9	Q561Q9_RAT	Ctsw	Cathepsin W	1	LLQYYQK	LLQYYQK	2	LLQYYQK2	50470.6	41904.7	51107.9
O35314	O35314	SCG1_RAT	Chgb	Secretogranin-1	1	LLRDPSDASVGR	LLRDPSDASVGR	3	LLRDPSDASVGR3	65060.7	92157.7	94057.8
Q6IMF3	Q6IMF3	K2C1_RAT	Krt1	Keratin, type II cytoskeletal 1	1	LLRDYQELMNTK	LLRDYQELMNTK	2	LLRDYQELMNTK2	2486.79	1917.52	3470.11
Q6IMF3	Q6IMF3	K2C1_RAT	Krt1	Keratin, type II cytoskeletal 1	1	LLRDYQELMNTK	LLRDYQELMNTK	3	LLRDYQELMNTK3	128485	125853	141786
Q6IG02	Q6IG02	K22E_RAT	Krt2	Keratin, type II cytoskeletal 2 epidermal	1	LLRDYQELMNVK	LLRDYQELMNVK	3	LLRDYQELMNVK3	35337.5	29355.8	20156.8
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	LLREELQLLQEQGSYVGEVVR	LLREELQLLQEQGSYVGEVVR	3	LLREELQLLQEQGSYVGEVVR3	50846.1	52126.2	41919.2
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	LLREELQLLQEQGSYVGEVVR	LLREELQLLQEQGSYVGEVVR	4	LLREELQLLQEQGSYVGEVVR4	6101.88	5622.62	
D3ZE20	D3ZE20	D3ZE20_RAT	Nfatc1	Nuclear factor of activated T-cells 1	1	LLRPHAFYQVHR	LLRPHAFYQVHR	3	LLRPHAFYQVHR3			2916.55
D3ZE20	D3ZE20	D3ZE20_RAT	Nfatc1	Nuclear factor of activated T-cells 1	1	LLRPHAFYQVHR	LLRPHAFYQVHR	4	LLRPHAFYQVHR4	6119.8	5868.04	11467
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LLRPPPGLDSESCGTESQK	LLRPPPGLDSESC(UniMod:4)GTESQK	3	LLRPPPGLDSESC(UniMod:4)GTESQK3	264405	260998	254997
Q9JJM9	Q9JJM9	SEPT5_RAT	Septin5	Septin-5	1	LLSAEER	LLSAEER	2	LLSAEER2	219116	193216	187865
A0A0G2JZH0	A0A0G2JZH0	A0A0G2JZH0_RAT	Cab39	Calcium binding protein 39	1	LLSAEFLEQHYDR	LLSAEFLEQHYDR	3	LLSAEFLEQHYDR3	23174.3	11724.4	13263.8
A0A0G2JZH0	A0A0G2JZH0	A0A0G2JZH0_RAT	Cab39	Calcium binding protein 39	1	LLSAEFLEQHYDRFFSEYEK	LLSAEFLEQHYDRFFSEYEK	4	LLSAEFLEQHYDRFFSEYEK4	9503.08	2429.24	18224
P60892	A0A0G2JSV3;P60892	PRPS1_RAT	Prps1	Ribose-phosphate pyrophosphokinase 1	0	LLSAGATR	LLSAGATR	2	LLSAGATR2	158844	97574.7	121289
D3ZT64	D3ZT64	D3ZT64_RAT	Atg2a	Autophagy related 2A	1	LLSAINLADPGGLADK	LLSAINLADPGGLADK	2	LLSAINLADPGGLADK2	4591.5	3625.04	4444.75
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	LLSALCILPQPEDMNER	LLSALC(UniMod:4)ILPQPEDMNER	3	LLSALC(UniMod:4)ILPQPEDMNER3	68107.7	76953.4	75608.2
A0A0G2K1D2	A0A0G2K1D2	A0A0G2K1D2_RAT	Rap1gds1	Rap1 GTPase-GDP dissociation stimulator 1	1	LLSALIR	LLSALIR	2	LLSALIR2	19320.1	17176.8	19721.2
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	LLSAQDEILLLHQAAAK	LLSAQDEILLLHQAAAK	2	LLSAQDEILLLHQAAAK2	7709.25	8804.66	6952.76
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	LLSAQDEILLLHQAAAK	LLSAQDEILLLHQAAAK	3	LLSAQDEILLLHQAAAK3	179677	215311	213880
P51111	P51111	HD_RAT	Htt	Huntingtin	1	LLSASFLLTGEK	LLSASFLLTGEK	2	LLSASFLLTGEK2	35595.5	39048.6	23653.5
P51111	P51111	HD_RAT	Htt	Huntingtin	1	LLSASFLLTGEKK	LLSASFLLTGEKK	3	LLSASFLLTGEKK3	2420.68	4087.12	5556.88
G3V965	G3V965	G3V965_RAT	Agpat5	1-acylglycerol-3-phosphate O-acyltransferase 5	1	LLSASQAFAAQR	LLSASQAFAAQR	2	LLSASQAFAAQR2	85834.6	90869.1	90774.3
G3V965	G3V965	G3V965_RAT	Agpat5	1-acylglycerol-3-phosphate O-acyltransferase 5	1	LLSASQAFAAQR	LLSASQAFAAQR	3	LLSASQAFAAQR3	8180.72	11214.8	
P10888	P10888	COX41_RAT	Cox4i1	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial	1	LLSASQK	LLSASQK	1	LLSASQK1	6791.33	2480.83	4921.53
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	LLSASTGGLKPSK	LLSASTGGLKPSK	2	LLSASTGGLKPSK2	1067.89		3501.83
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	LLSASTGGLKPSK	LLSASTGGLKPSK	3	LLSASTGGLKPSK3	14136	13449.8	11647.3
P37136	P37136	ACES_RAT	Ache	Acetylcholinesterase	1	LLSATDTLDEAER	LLSATDTLDEAER	2	LLSATDTLDEAER2	8781.51	9909.31	10024.5
D3ZQI6	D3ZQI6	D3ZQI6_RAT	Xpo4	Exportin 4	1	LLSAVLR	LLSAVLR	2	LLSAVLR2	21274.9	29692.2	13381.5
A0A8I6GKX8	A0A8I6GKX8	A0A8I6GKX8_RAT	Iqsec2	IQ motif and Sec7 domain ArfGEF 2	1	LLSAVPGGER	LLSAVPGGER	2	LLSAVPGGER2	9190.03		6227.05
D4A6U4	D4A6U4	D4A6U4_RAT	Tecpr2	Tectonin beta-propeller repeat containing 2	1	LLSCFDDLVAVGTASGR	LLSC(UniMod:4)FDDLVAVGTASGR	2	LLSC(UniMod:4)FDDLVAVGTASGR2		3619.99	
P70483	P70483	STRN_RAT	Strn	Striatin	1	LLSCSADGTLR	LLSC(UniMod:4)SADGTLR	2	LLSC(UniMod:4)SADGTLR2	241074	248535	284231
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	LLSCVLGPR	LLSC(UniMod:4)VLGPR	2	LLSC(UniMod:4)VLGPR2	323583	367217	343653
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	LLSDFPVVSTATR	LLSDFPVVSTATR	2	LLSDFPVVSTATR2	193506	190220	198699
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	LLSDFPVVSTATR	LLSDFPVVSTATR	3	LLSDFPVVSTATR3	6923.44		
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	LLSDHIEQMATE	LLSDHIEQMATE	2	LLSDHIEQMATE2	176310	172551	171652
B1H274	B1H274	B1H274_RAT	Atg4a	Cysteine protease	1	LLSDISAR	LLSDISAR	2	LLSDISAR2	28321.5		30277.3
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	LLSDKLK	LLSDKLK	2	LLSDKLK2	43813.5	84120	61953.1
Q9JID1	Q9JID1	PDCD4_RAT	Pdcd4	Programmed cell death protein 4	1	LLSDLCGTVMSTNDVEK	LLSDLC(UniMod:4)GTVMSTNDVEK	2	LLSDLC(UniMod:4)GTVMSTNDVEK2	1891.81	2323.1	376.012
Q5XIP9	Q5XIP9	TMM43_RAT	Tmem43	Transmembrane protein 43	1	LLSDPNYGVHLPAVK	LLSDPNYGVHLPAVK	3	LLSDPNYGVHLPAVK3	137189	124096	119379
F1M943	F1M943	F1M943_RAT	Armc8	Armadillo repeat-containing protein 8	1	LLSDSDMNVLMK	LLSDSDMNVLMK	2	LLSDSDMNVLMK2	12278.4	10075.3	13078.9
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	LLSDSLPPSTGTFQEAQSR	LLSDSLPPSTGTFQEAQSR	3	LLSDSLPPSTGTFQEAQSR3	266525	227591	262371
E9PTA5	E9PTA5	E9PTA5_RAT	Pign	GPI ethanolamine phosphate transferase 1	1	LLSDSQQLDILR	LLSDSQQLDILR	2	LLSDSQQLDILR2	12045.2	14363.9	16540
Q5XI83	Q5XI83	VP35L_RAT	Vps35l	VPS35 endosomal protein-sorting factor-like	1	LLSDTSVIQFYPSK	LLSDTSVIQFYPSK	2	LLSDTSVIQFYPSK2	6434.55		4993.19
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LLSDTVASDPGILQQQLATTK	LLSDTVASDPGILQQQLATTK	3	LLSDTVASDPGILQQQLATTK3	30829.1	31068.7	30197.2
A0A8I5ZT10	A0A8I5ZT10	A0A8I5ZT10_RAT	Ccm2	CCM2 scaffold protein	1	LLSDYIEK	LLSDYIEK	2	LLSDYIEK2	34192.1	44273.5	36150
D3ZXK7	D3ZXK7	RN123_RAT	Rnf123	E3 ubiquitin-protein ligase RNF123	1	LLSDYLYR	LLSDYLYR	2	LLSDYLYR2	26702.8	32304.2	26766
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	LLSEEVFDFSSGQITQVK	LLSEEVFDFSSGQITQVK	3	LLSEEVFDFSSGQITQVK3		2960.77	4519.89
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	LLSEIEFLVNHMDLAK	LLSEIEFLVNHMDLAK	3	LLSEIEFLVNHMDLAK3	27384.2	16458.6	17551.9
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	LLSELRDEIR	LLSELRDEIR	3	LLSELRDEIR3	20073.3	27900.8	31305.6
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LLSELSDASIQVENVR	LLSELSDASIQVENVR	2	LLSELSDASIQVENVR2	58312.7	64676	52578.9
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LLSELSDASIQVENVR	LLSELSDASIQVENVR	3	LLSELSDASIQVENVR3	61112.2	69007.2	51291.3
D3ZZ81	Q91Z80;Q91Z79;D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	0	LLSESNER	LLSESNER	2	LLSESNER2	95179.4	94167.5	103051
O55158	O55158	O55158_RAT	Tspan8	Tetraspanin	1	LLSETSNEAK	LLSETSNEAK	2	LLSETSNEAK2	7499.82	7586.86	9409.19
P85515	F7F067;P85515	ACTZ_RAT	Actr1a	Alpha-centractin	0	LLSEVKK	LLSEVKK	2	LLSEVKK2	152767	186963	153267
A0A0G2JSI4	A0A0G2JSI4	A0A0G2JSI4_RAT	Adgre5	Adhesion G protein-coupled receptor E5	1	LLSGAESFTNK	LLSGAESFTNK	2	LLSGAESFTNK2	6258.66	6669.84	
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LLSGEDVGQDEGATR	LLSGEDVGQDEGATR	2	LLSGEDVGQDEGATR2	77773.4	95387	85764.3
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	LLSGFGVDR	LLSGFGVDR	2	LLSGFGVDR2	25184.9	30915.9	29190.8
A0A8I5ZNK2	A0A8I5ZNK2	A0A8I5ZNK2_RAT	Oxsr1	non-specific serine/threonine protein kinase	1	LLSGGSVLDIIK	LLSGGSVLDIIK	2	LLSGGSVLDIIK2	9883.11	6820.17	
O88902	O88902	PTN23_RAT	Ptpn23	Tyrosine-protein phosphatase non-receptor type 23 (Fragment)	1	LLSGPLDQVR	LLSGPLDQVR	2	LLSGPLDQVR2	18825.8	18055.7	17668.2
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LLSGPWAPGSGVR	LLSGPWAPGSGVR	2	LLSGPWAPGSGVR2	563233	654426	654557
A0A8I5ZPV1	A0A8I5ZPV1	A0A8I5ZPV1_RAT	Tbc1d22a	TBC1 domain family, member 22a	1	LLSGYLPANVDR	LLSGYLPANVDR	2	LLSGYLPANVDR2	34476.4	31312.2	25762
O70595	O70595	ABCB6_RAT	Abcb6	ATP-binding cassette sub-family B member 6	1	LLSGYLWPR	LLSGYLWPR	2	LLSGYLWPR2	33140.4	24014.8	33036
Q5BJY6	Q5BJY6	NAGA_RAT	Amdhd2	N-acetylglucosamine-6-phosphate deacetylase	1	LLSHGVTSFCPTLVTSPPEVYHK	LLSHGVTSFC(UniMod:4)PTLVTSPPEVYHK	4	LLSHGVTSFC(UniMod:4)PTLVTSPPEVYHK4	5858.24	3047.05	4829.21
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	LLSHLEEMQHTISTDEEK	LLSHLEEMQHTISTDEEK	3	LLSHLEEMQHTISTDEEK3	6430.71	8404.88	5076.34
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	LLSHLEEMQHTISTDEEK	LLSHLEEMQHTISTDEEK	4	LLSHLEEMQHTISTDEEK4	7749.99	14122.2	20157.8
F1M086	F1M7K9;F1M086	F1M086_RAT	Elp4	Elongator complex protein 4	0	LLSIAGTR	LLSIAGTR	2	LLSIAGTR2	88869.4	66472.2	114963
F1M086	F1M7K9;F1M086	F1M086_RAT	Elp4	Elongator complex protein 4	0	LLSIAGTRPSVR	LLSIAGTRPSVR	3	LLSIAGTRPSVR3	87255.5	84491.1	83019.4
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	LLSIVNVCK	LLSIVNVC(UniMod:4)K	2	LLSIVNVC(UniMod:4)K2	50873.5	38729	51562.9
P83953	P83953	IMA5_RAT	Kpna1	Importin subunit alpha-5	1	LLSKEPNPPIDEVINTPGVVAR	LLSKEPNPPIDEVINTPGVVAR	3	LLSKEPNPPIDEVINTPGVVAR3	32410.6	44022.5	44766.3
A0A8I6ASK1	A0A8I6ASK1	A0A8I6ASK1_RAT	P4ha2	procollagen-proline 4-dioxygenase	1	LLSLDPSHER	LLSLDPSHER	3	LLSLDPSHER3	54164.3	41310.7	47196.8
Q9Z272	Q66H91;Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	0	LLSLGAQANFFHPEK	LLSLGAQANFFHPEK	3	LLSLGAQANFFHPEK3	20279.9	17225.9	19441.3
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	LLSLGDR	LLSLGDR	2	LLSLGDR2	16687.4		15654.3
Q63616	Q63616	VP33B_RAT	Vps33b	Vacuolar protein sorting-associated protein 33B	1	LLSLHIGACESIMK	LLSLHIGAC(UniMod:4)ESIMK	3	LLSLHIGAC(UniMod:4)ESIMK3	3203.6	4345.85	
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	LLSLIGR	LLSLIGR	2	LLSLIGR2	59342.2	77074.2	62273.2
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	LLSLISIALPENK	LLSLISIALPENK	2	LLSLISIALPENK2	24109.2	38952.4	22939.2
P61131	P61131	SIA4C_RAT	St3gal4	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4	1	LLSLPIQQPR	LLSLPIQQPR	2	LLSLPIQQPR2	27286.6	21552.4	21796
E9PU02	E9PU02	E9PU02_RAT	Trappc9	Trafficking protein particle complex subunit 9	1	LLSLPTSLRPQK	LLSLPTSLRPQK	3	LLSLPTSLRPQK3	28264	27033.9	34849.9
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	LLSLQPPGMTPVSQAPR	LLSLQPPGMTPVSQAPR	2	LLSLQPPGMTPVSQAPR2	125587	102168	105048
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	LLSLQPPGMTPVSQAPR	LLSLQPPGMTPVSQAPR	3	LLSLQPPGMTPVSQAPR3	77180.7	98929.2	104993
F1LU27	F1LU27	F1LU27_RAT	Focad	Focadhesin	1	LLSLTEGQR	LLSLTEGQR	2	LLSLTEGQR2	11745.9	16169.4	13000.5
P53534	P53534	PYGB_RAT	Pygb	Glycogen phosphorylase, brain form (Fragment)	1	LLSLVDDEAFIR	LLSLVDDEAFIR	2	LLSLVDDEAFIR2	13450.4	17328.8	15482.2
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	LLSMAYSAVGK	LLSMAYSAVGK	2	LLSMAYSAVGK2	5886.75	5704.36	
D4A7Z0	D4A7Z0	D4A7Z0_RAT	Wdtc1	WD and tetratricopeptide repeats 1	1	LLSMHTGHTANIFSVK	LLSMHTGHTANIFSVK	4	LLSMHTGHTANIFSVK4	2535.64		3498.75
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	LLSMLMDVK	LLSMLMDVK	2	LLSMLMDVK2	84587.3	86103.6	80893.3
A0A0G2K9K4	A0A0G2K9K4	A0A0G2K9K4_RAT	Tfg	Trafficking from ER to golgi regulator	1	LLSNDEVTIK	LLSNDEVTIK	2	LLSNDEVTIK2	116527	119443	98291.8
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	LLSNEEEKNR	LLSNEEEKNR	3	LLSNEEEKNR3	87490.9	68868.2	67186.4
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	LLSNLVK	LLSNLVK	1	LLSNLVK1	3334.97	1107.37	2983.74
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	LLSNLVK	LLSNLVK	2	LLSNLVK2	853144	914909	942163
P28064	P28064	PSB8_RAT	Psmb8	Proteasome subunit beta type-8	1	LLSNMMLQYR	LLSNMMLQYR	2	LLSNMMLQYR2	2.07775e+06	2.02843e+06	2.26324e+06
P0C5W1	P0C5W1	MAP1S_RAT	Map1s	Microtubule-associated protein 1S	1	LLSPALGVVFLNAR	LLSPALGVVFLNAR	2	LLSPALGVVFLNAR2	24557.1	33355.8	27485.8
P0C5W1	P0C5W1	MAP1S_RAT	Map1s	Microtubule-associated protein 1S	1	LLSPALGVVFLNAR	LLSPALGVVFLNAR	3	LLSPALGVVFLNAR3	7493.59	7851.16	8103.46
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	LLSPFMPFVTEELFQR	LLSPFMPFVTEELFQR	2	LLSPFMPFVTEELFQR2		45316.8	47997.4
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	LLSPGTSK	LLSPGTSK	2	LLSPGTSK2	119571	128650	
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	LLSPILAR	LLSPILAR	2	LLSPILAR2	23381.7	20615.6	20221
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	LLSPTER	LLSPTER	2	LLSPTER2	49396.9	41971.6	39727.8
Q66HC5	Q66HC5	NUP93_RAT	Nup93	Nuclear pore complex protein Nup93	1	LLSPVVPQISAPQSNK	LLSPVVPQISAPQSNK	2	LLSPVVPQISAPQSNK2	23530.7	15507.5	15643
Q66HC5	Q66HC5	NUP93_RAT	Nup93	Nuclear pore complex protein Nup93	1	LLSPVVPQISAPQSNK	LLSPVVPQISAPQSNK	3	LLSPVVPQISAPQSNK3	9082.5	10406.8	
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	LLSQCMEYFDLR	LLSQC(UniMod:4)MEYFDLR	2	LLSQC(UniMod:4)MEYFDLR2	14293	14670.9	22903.8
A0A0G2K7U7	A0A0G2K7U7	A0A0G2K7U7_RAT	Ankrd27	Ankyrin repeat domain 27	1	LLSQDDQDKDAMQK	LLSQDDQDKDAMQK	3	LLSQDDQDKDAMQK3	10096.1	11452.2	14419.8
D3ZZL9	D3ZZL9	GCC2_RAT	Gcc2	GRIP and coiled-coil domain-containing protein 2	1	LLSQELVSELESTMK	LLSQELVSELESTMK	3	LLSQELVSELESTMK3	2473.01	3240.28	4261.65
A0A8I6G251	A0A8I6G251	A0A8I6G251_RAT	Tnpo3	Transportin 3	1	LLSQEPSNGISSDPTVFLDR	LLSQEPSNGISSDPTVFLDR	3	LLSQEPSNGISSDPTVFLDR3	4670.94		
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	LLSQGMTEEEEDK	LLSQGMTEEEEDK	2	LLSQGMTEEEEDK2	5461.63	14420	8844.86
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LLSQLSR	LLSQLSR	2	LLSQLSR2	385889	416773	344926
A0A8I6A0R8	A0A8I6A0R8	A0A8I6A0R8_RAT	Srl	Sarcalumenin	1	LLSQQCSYMGGCFLEK	LLSQQC(UniMod:4)SYMGGC(UniMod:4)FLEK	2	LLSQQC(UniMod:4)SYMGGC(UniMod:4)FLEK2	1567.02	1092.1	3191.37
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	LLSQTMK	LLSQTMK	2	LLSQTMK2	60609.2	86371.6	84747.7
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	LLSSAFDEVYPALPSDVQTAIK	LLSSAFDEVYPALPSDVQTAIK	3	LLSSAFDEVYPALPSDVQTAIK3	93771.1	93601.2	90812.2
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	LLSSCCK	LLSSC(UniMod:4)C(UniMod:4)K	2	LLSSC(UniMod:4)C(UniMod:4)K2	58341.2	59750	69692.2
F7FQB8	A0A8I5ZWC6;F7FQB8	F7FQB8_RAT	Kpna4	Karyopherin subunit alpha 4	0	LLSSDRNPPIDDLIK	LLSSDRNPPIDDLIK	3	LLSSDRNPPIDDLIK3	395300	403831	454852
D3ZE72	D3ZE72	D3ZE72_RAT	Metap1	Methionine aminopeptidase	1	LLSSEDIEGMR	LLSSEDIEGMR	2	LLSSEDIEGMR2	36051.2	29101.4	39080.8
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	LLSSFLK	LLSSFLK	2	LLSSFLK2	55152.8	60134.1	43460.8
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	LLSSGFDIDTPDDFGR	LLSSGFDIDTPDDFGR	2	LLSSGFDIDTPDDFGR2	6484.87	6222.58	7487.77
F1LRI5	F1LRI5	F1LRI5_RAT	Gcn1	GCN1 activator of EIF2AK4	1	LLSSLGGIK	LLSSLGGIK	2	LLSSLGGIK2		4810.05	4126.73
D3ZIT4	D3ZIT4	D3ZIT4_RAT	Anapc7	Anaphase promoting complex subunit 7	1	LLSSLLLTMSNNNPELFSPSQK	LLSSLLLTMSNNNPELFSPSQK	3	LLSSLLLTMSNNNPELFSPSQK3	6305.03		2911.3
D3ZBX9	D3ZBX9	D3ZBX9_RAT	Ccdc92	Coiled-coil domain containing 92	1	LLSSSGTSDASPAGSPALASYKPTPPK	LLSSSGTSDASPAGSPALASYKPTPPK	3	LLSSSGTSDASPAGSPALASYKPTPPK3	7622.03	1466.36	5008.06
D3ZWS6	D3ZWS6	D3ZWS6_RAT	Naa30	N(alpha)-acetyltransferase 30, NatC catalytic subunit	1	LLSSSLTTGCSLSSSLGR	LLSSSLTTGC(UniMod:4)SLSSSLGR	2	LLSSSLTTGC(UniMod:4)SLSSSLGR2	2928.02		1727.9
A0A8I6AFQ3	A0A8I6AFQ3	A0A8I6AFQ3_RAT	Dtymk	dTMP kinase	1	LLSSYLEK	LLSSYLEK	2	LLSSYLEK2	13511.7	6997.19	
P52303	P52303	AP1B1_RAT	Ap1b1	AP-1 complex subunit beta-1	1	LLSTDPVAAK	LLSTDPVAAK	2	LLSTDPVAAK2	276830	276189	232224
P62944	A0A8I5ZZX8;P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	LLSTDPVTAK	LLSTDPVTAK	2	LLSTDPVTAK2	172762	152388	148548
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	LLSTFPR	LLSTFPR	2	LLSTFPR2	124504	151938	137584
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	LLSTGDDFGK	LLSTGDDFGK	2	LLSTGDDFGK2	268162	270819	258351
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LLSTLCSADVCQCAEGK	LLSTLC(UniMod:4)SADVC(UniMod:4)QC(UniMod:4)AEGK	2	LLSTLC(UniMod:4)SADVC(UniMod:4)QC(UniMod:4)AEGK2	14800.2	22574.8	21034.1
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LLSTLCSADVCQCAEGK	LLSTLC(UniMod:4)SADVC(UniMod:4)QC(UniMod:4)AEGK	3	LLSTLC(UniMod:4)SADVC(UniMod:4)QC(UniMod:4)AEGK3	8.56559e+06	8.34817e+06	9.20422e+06
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LLSTLCSADVCQCAEGKCPR	LLSTLC(UniMod:4)SADVC(UniMod:4)QC(UniMod:4)AEGKC(UniMod:4)PR	3	LLSTLC(UniMod:4)SADVC(UniMod:4)QC(UniMod:4)AEGKC(UniMod:4)PR3	286325	428396	365062
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LLSTLCSADVCQCAEGKCPR	LLSTLC(UniMod:4)SADVC(UniMod:4)QC(UniMod:4)AEGKC(UniMod:4)PR	4	LLSTLC(UniMod:4)SADVC(UniMod:4)QC(UniMod:4)AEGKC(UniMod:4)PR4	4849.15	6037.26	2351.22
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LLSTLCSADVCQCAEGKCPRQR	LLSTLC(UniMod:4)SADVC(UniMod:4)QC(UniMod:4)AEGKC(UniMod:4)PRQR	4	LLSTLC(UniMod:4)SADVC(UniMod:4)QC(UniMod:4)AEGKC(UniMod:4)PRQR4	6742.74	13381.5	13264
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	LLSTSIVVR	LLSTSIVVR	2	LLSTSIVVR2	14239	11438.1	14999.6
Q5I0H9	Q5I0H9	PDIA5_RAT	Pdia5	Protein disulfide-isomerase A5	1	LLSTVAQAVK	LLSTVAQAVK	2	LLSTVAQAVK2	46011.5	36732	40118.5
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	LLSTVPAASSCLR	LLSTVPAASSC(UniMod:4)LR	2	LLSTVPAASSC(UniMod:4)LR2	10099.5	4696.89	
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	LLSTYICK	LLSTYIC(UniMod:4)K	2	LLSTYIC(UniMod:4)K2	20780.7	16888.6	12377.4
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	LLSVETPR	LLSVETPR	2	LLSVETPR2	41242.3	31114.8	33902.2
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	LLSVFMSR	LLSVFMSR	2	LLSVFMSR2	22032.1	18142.9	22675
O08561	O08561	PI4KB_RAT	Pi4kb	Phosphatidylinositol 4-kinase beta	1	LLSVIVK	LLSVIVK	2	LLSVIVK2	15718.6	10838.8	6748.27
P70541	P70541	EI2BG_RAT	Eif2b3	Translation initiation factor eIF-2B subunit gamma	1	LLSVLCPEESMIHPSAQIANK	LLSVLC(UniMod:4)PEESMIHPSAQIANK	3	LLSVLC(UniMod:4)PEESMIHPSAQIANK3	42344.3	36508.4	36352
P85971	P85971	6PGL_RAT	Pgls	6-phosphogluconolactonase	1	LLSVPFEK	LLSVPFEK	2	LLSVPFEK2	77324.6	78349.7	64294.1
Q5M834	Q5M834	DTBP1_RAT	Dtnbp1	Dysbindin	1	LLSVQQDFTSGLK	LLSVQQDFTSGLK	2	LLSVQQDFTSGLK2	9034.82	8718.5	5917.9
A0A0G2K069	A0A0G2K069	A0A0G2K069_RAT	Col11a2	Collagen type XI alpha 2 chain	1	LLSVSAHQDVSYPCSGVSQDGPLK	LLSVSAHQDVSYPC(UniMod:4)SGVSQDGPLK	3	LLSVSAHQDVSYPC(UniMod:4)SGVSQDGPLK3	40440.7	32088.5	21887.4
Q4KM45	Q4KM45	ADSSP_RAT	Adissp	Adipose-secreted signaling protein	1	LLSVTPIPEGYSIK	LLSVTPIPEGYSIK	2	LLSVTPIPEGYSIK2	20415.9	20881.8	13447.6
D3ZWR1	D3ZWR1	D3ZWR1_RAT	Nt5c	5', 3'-nucleotidase, cytosolic	1	LLSWSDDWR	LLSWSDDWR	2	LLSWSDDWR2	17239	19427.2	24106.7
P53678	P53678	AP3M2_RAT	Ap3m2	AP-3 complex subunit mu-2	1	LLSYHVSAQNLVAIPVYVK	LLSYHVSAQNLVAIPVYVK	3	LLSYHVSAQNLVAIPVYVK3	5502.84	4311.13	
Q9JI03	Q9JI03	CO5A1_RAT	Col5a1	Collagen alpha-1(V) chain	1	LLSYVDAEGNPVGVVQMTFLR	LLSYVDAEGNPVGVVQMTFLR	3	LLSYVDAEGNPVGVVQMTFLR3	3196.64	7339.64	4272.9
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	LLTAHGQGYGK	LLTAHGQGYGK	2	LLTAHGQGYGK2	6082.5	1847.13	3540.04
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	LLTAHGQGYGK	LLTAHGQGYGK	3	LLTAHGQGYGK3	56033.6	69825.8	35304
G3V8L1	G3V8L1	G3V8L1_RAT	Pycard	PYD and CARD domain containing	1	LLTAPVR	LLTAPVR	2	LLTAPVR2	35204.8	35558.5	27655.9
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	LLTASELTLDQWFQLSSSGPNSR	LLTASELTLDQWFQLSSSGPNSR	3	LLTASELTLDQWFQLSSSGPNSR3	26587.1	33027.6	32452.5
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	LLTCIEPPQPR	LLTC(UniMod:4)IEPPQPR	2	LLTC(UniMod:4)IEPPQPR2	20622.6	19752.6	9440.58
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	LLTCIEPPQPR	LLTC(UniMod:4)IEPPQPR	3	LLTC(UniMod:4)IEPPQPR3	2272.42	2701.15	
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	LLTDALELTLGVAPK	LLTDALELTLGVAPK	2	LLTDALELTLGVAPK2	9783.9	15475.2	11938.4
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	LLTDCNTETFQK	LLTDC(UniMod:4)NTETFQK	2	LLTDC(UniMod:4)NTETFQK2	18043.3	27637.4	18797.8
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	LLTDDGNK	LLTDDGNK	1	LLTDDGNK1	2148.19	1036.33	1849.28
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	LLTDDGNK	LLTDDGNK	2	LLTDDGNK2	193170	187317	222942
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	LLTDDGNKWLYK	LLTDDGNKWLYK	3	LLTDDGNKWLYK3	37126.1	41073	47255
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	LLTECPAMMDTEYTK	LLTEC(UniMod:4)PAMMDTEYTK	2	LLTEC(UniMod:4)PAMMDTEYTK2	13570.3	15957.8	4381.12
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	LLTEEGQK	LLTEEGQK	1	LLTEEGQK1			834.59
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	LLTEEGQK	LLTEEGQK	2	LLTEEGQK2	478793	442096	493924
Q80WD1	Q80WD1	R4RL2_RAT	Rtn4rl2	Reticulon-4 receptor-like 2	1	LLTEHVFR	LLTEHVFR	2	LLTEHVFR2	3297.47	4964.85	1540.49
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LLTEPDVQK	LLTEPDVQK	2	LLTEPDVQK2	503609	532501	484790
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	LLTESPKEDHFVAK	LLTESPKEDHFVAK	3	LLTESPKEDHFVAK3	2884.7		4901.67
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	LLTESPKEDHFVAK	LLTESPKEDHFVAK	4	LLTESPKEDHFVAK4	6100.74	4229.82	7064.2
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	LLTETEDWLYEEGEDQAK	LLTETEDWLYEEGEDQAK	3	LLTETEDWLYEEGEDQAK3	37136.3	35530.5	32892.8
Q505J8	Q505J8	SYFA_RAT	Farsa	Phenylalanine--tRNA ligase alpha subunit	1	LLTEVILK	LLTEVILK	2	LLTEVILK2	25460	11453	17995.2
Q63632	G3V6N7;Q63632	S12A4_RAT	Slc12a4	Solute carrier family 12 member 4	0	LLTFASQLK	LLTFASQLK	2	LLTFASQLK2	40277.8	31576.8	37876.5
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	LLTFGCNK	LLTFGC(UniMod:4)NK	2	LLTFGC(UniMod:4)NK2	80629.9	75766.9	76225
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	LLTFLDR	LLTFLDR	2	LLTFLDR2	14219.8	21123.5	23408.7
D3ZAZ0	D3ZAZ0	D3ZAZ0_RAT	Eif3m	Eukaryotic translation initiation factor 3 subunit M	1	LLTFMGMAVENK	LLTFMGMAVENK	2	LLTFMGMAVENK2	113293	119801	130639
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	LLTFNPTYCVLK	LLTFNPTYC(UniMod:4)VLK	2	LLTFNPTYC(UniMod:4)VLK2	129600	146483	126357
A0A0G2K762	A0A0G2K762	A0A0G2K762_RAT	Abcf2	ATP binding cassette subfamily F member 2	1	LLTGELLPTDGMIR	LLTGELLPTDGMIR	2	LLTGELLPTDGMIR2	24671.4	14393.7	17408
Q4FZX7	Q4FZX7	SRPRB_RAT	Srprb	Signal recognition particle receptor subunit beta	1	LLTGQYR	LLTGQYR	2	LLTGQYR2	69615.5	78135.2	74651.2
Q6QI25	Q6QI25	ORML3_RAT	Ormdl3	ORM1-like protein 3	1	LLTHWEQMDYGVQFTASR	LLTHWEQMDYGVQFTASR	3	LLTHWEQMDYGVQFTASR3	10529.4	11758.4	
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	LLTHYVK	LLTHYVK	2	LLTHYVK2	19704.1		10888.4
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	LLTIDKDLMVAQFSTPSLPPSLK	LLTIDKDLMVAQFSTPSLPPSLK	3	LLTIDKDLMVAQFSTPSLPPSLK3	125794	123100	109150
Q4AE70	Q4AE70	CARM1_RAT	Carm1	Histone-arginine methyltransferase CARM1	1	LLTIGDANGEIQR	LLTIGDANGEIQR	2	LLTIGDANGEIQR2	3385.58		3253.07
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	LLTLEDNELGSGNFGTVK	LLTLEDNELGSGNFGTVK	2	LLTLEDNELGSGNFGTVK2	29301.4	22238.8	26974.1
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	LLTLEDNELGSGNFGTVK	LLTLEDNELGSGNFGTVK	3	LLTLEDNELGSGNFGTVK3	8829	10273.4	
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	LLTLEDNELGSGNFGTVKK	LLTLEDNELGSGNFGTVKK	3	LLTLEDNELGSGNFGTVKK3	8978.03	10699.1	11919.2
D3ZM21	D3ZM21	D3ZM21_RAT	Comtd1	Catechol-O-methyltransferase domain containing 1	1	LLTLEQPQGDSMMTCEQAQLLANLAR	LLTLEQPQGDSMMTC(UniMod:4)EQAQLLANLAR	3	LLTLEQPQGDSMMTC(UniMod:4)EQAQLLANLAR3	9734.19	15298.8	12255.6
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	LLTLGLSLLHADVVPNATIR	LLTLGLSLLHADVVPNATIR	3	LLTLGLSLLHADVVPNATIR3	25680.5	7100.24	28347.7
Q4QQS7	Q4QQS7	Q4QQS7_RAT	Umps	Uridine 5'-monophosphate synthase	1	LLTLMQK	LLTLMQK	2	LLTLMQK2	12491.4		3665.96
B0BN68	B0BN68	B0BN68_RAT	Mrps9	Mitochondrial ribosomal protein S9	1	LLTLPCGPAEEDFVQR	LLTLPC(UniMod:4)GPAEEDFVQR	2	LLTLPC(UniMod:4)GPAEEDFVQR2	7458.15	7702.73	11104.4
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LLTLPNGER	LLTLPNGER	2	LLTLPNGER2	368715	414554	375626
G3V6R4	G3V6R4	G3V6R4_RAT	Lrrc1	Leucine rich repeat containing 1	1	LLTLPTSIGK	LLTLPTSIGK	2	LLTLPTSIGK2	40705.3	31388.5	39225.3
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	LLTMMPTEEER	LLTMMPTEEER	2	LLTMMPTEEER2	631112	690417	626723
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	LLTMMPTEEERQK	LLTMMPTEEERQK	3	LLTMMPTEEERQK3	7822.03	14896.1	14367.3
A0A1W2Q626	A0A1W2Q626	A0A1W2Q626_RAT	Slc39a10	Solute carrier family 39 member 10	1	LLTNLGLGEIK	LLTNLGLGEIK	2	LLTNLGLGEIK2	12360.8	11489.2	9214.62
A0A8I5Y8A9	A0A8I5Y8A9	A0A8I5Y8A9_RAT	Gltpd2	Glycolipid transfer protein domain containing 2	1	LLTPLGSVFAFATSEASNK	LLTPLGSVFAFATSEASNK	3	LLTPLGSVFAFATSEASNK3	5775.96	3879.81	
A0A0G2K6T9	A0A0G2K6T9	A0A0G2K6T9_RAT	Pcdh1	Protocadherin 1	1	LLTPQTR	LLTPQTR	2	LLTPQTR2	49695.6	63486.2	61287.8
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	LLTPTDTPEWLSFDVTGVVR	LLTPTDTPEWLSFDVTGVVR	3	LLTPTDTPEWLSFDVTGVVR3	44849	47147.1	29080.7
A0A8I6GKH8	A0A8I6GKH8	A0A8I6GKH8_RAT	Map7	Microtubule-associated protein 7	1	LLTPTHSFLAR	LLTPTHSFLAR	3	LLTPTHSFLAR3	19656	16881.8	18781.6
D4ADG2	D4ADG2	D4ADG2_RAT	Iba57	Iron-sulfur cluster assembly factor IBA57	1	LLTQDGGPAVVPR	LLTQDGGPAVVPR	2	LLTQDGGPAVVPR2	10336.1	4579.21	11293.3
A0A8I6A180	A0A8I6A180	A0A8I6A180_RAT	Tenm4	Teneurin transmembrane protein 4	1	LLTQEAR	LLTQEAR	2	LLTQEAR2	232223	258827	211186
A0A8I5ZK89	A0A8I5ZK89	A0A8I5ZK89_RAT	Dock5	Dedicator of cytokinesis 5	1	LLTQFPNAEK	LLTQFPNAEK	2	LLTQFPNAEK2	34947	22222.1	26963.4
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LLTQHENIK	LLTQHENIK	2	LLTQHENIK2	73638.6	60371.4	48271.2
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	LLTQYILNLGK	LLTQYILNLGK	2	LLTQYILNLGK2	88520.8	105113	110728
D4A929	D4A929	WDR81_RAT	Wdr81	WD repeat-containing protein 81	1	LLTSCYVGPTR	LLTSC(UniMod:4)YVGPTR	2	LLTSC(UniMod:4)YVGPTR2	2054.47	7092.88	3997.67
A0A8I6AIH6	A0A8I6AIH6	A0A8I6AIH6_RAT	Suclg2	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial	1	LLTSDPK	LLTSDPK	2	LLTSDPK2	77995.9	80867.4	71345.2
A0A0G2K0A0	A0A0G2K0A0	A0A0G2K0A0_RAT	Cyth4	Cytohesin 4	1	LLTSDVQDIAQFLYK	LLTSDVQDIAQFLYK	2	LLTSDVQDIAQFLYK2	7627.8	6303.66	
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	LLTSESK	LLTSESK	2	LLTSESK2	85928.5	99271.1	68216.8
A0A8I5ZUI2	A0A8I5ZUI2	A0A8I5ZUI2_RAT	Ano10	Anoctamin	1	LLTSGIVTQVFPLHDTEALK	LLTSGIVTQVFPLHDTEALK	3	LLTSGIVTQVFPLHDTEALK3		6575.02	
A0A8I5ZUI2	A0A8I5ZUI2	A0A8I5ZUI2_RAT	Ano10	Anoctamin	1	LLTSGIVTQVFPLHDTEALKK	LLTSGIVTQVFPLHDTEALKK	4	LLTSGIVTQVFPLHDTEALKK4	4836.16		3965.32
B2RYG6	A0A8I6A324;B2RYG6	OTUB1_RAT	Otub1	Ubiquitin thioesterase OTUB1	0	LLTSGYLQR	LLTSGYLQR	2	LLTSGYLQR2	58068.9	50355.4	51780.5
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	LLTSHDCDVLESELR	LLTSHDC(UniMod:4)DVLESELR	3	LLTSHDC(UniMod:4)DVLESELR3	3324.87	4465.96	4505.75
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	LLTSLFQDLQVEALHK	LLTSLFQDLQVEALHK	3	LLTSLFQDLQVEALHK3	9550.71	19243.4	14694.3
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	LLTSLLK	LLTSLLK	2	LLTSLLK2	229995	202880	203205
F1LU27	F1LU27	F1LU27_RAT	Focad	Focadhesin	1	LLTSLWEK	LLTSLWEK	2	LLTSLWEK2		15405.9	
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LLTSPDISYDEAR	LLTSPDISYDEAR	2	LLTSPDISYDEAR2	100128	124760	103251
D4A7H1	D4A7H1	SL9A9_RAT	Slc9a9	Sodium/hydrogen exchanger 9	1	LLTSPQAYGEQLK	LLTSPQAYGEQLK	2	LLTSPQAYGEQLK2	5960.07	7625.88	3176.1
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	LLTSQVCR	LLTSQVC(UniMod:4)R	2	LLTSQVC(UniMod:4)R2	627187	581683	575180
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	LLTSSAVHK	LLTSSAVHK	2	LLTSSAVHK2			2981.99
P18395	P18395	CSDE1_RAT	Csde1	Cold shock domain-containing protein E1	1	LLTSYGFIQCSER	LLTSYGFIQC(UniMod:4)SER	2	LLTSYGFIQC(UniMod:4)SER2	30271.1	34670.4	31387.2
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	LLTTDDVAFSDADSGFSDAQLVLTR	LLTTDDVAFSDADSGFSDAQLVLTR	3	LLTTDDVAFSDADSGFSDAQLVLTR3	8230	7278.2	
A0A8I6A5Y0	A0A8I6A5Y0	A0A8I6A5Y0_RAT	Vta1	Vesicle trafficking 1	1	LLTTGRE	LLTTGRE	2	LLTTGRE2	50608.8		44234.8
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	LLTTIGKDLDFAK	LLTTIGKDLDFAK	3	LLTTIGKDLDFAK3	6602.78	13840.2	10963.3
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	LLTVQHPLEESR	LLTVQHPLEESR	3	LLTVQHPLEESR3	44858.9	32842.7	32237.4
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LLTVWLPDSLTTWEIHGVSLSK	LLTVWLPDSLTTWEIHGVSLSK	3	LLTVWLPDSLTTWEIHGVSLSK3	120657	160756	109630
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LLTVWLPDSLTTWEIHGVSLSK	LLTVWLPDSLTTWEIHGVSLSK	4	LLTVWLPDSLTTWEIHGVSLSK4	34873.6	46907.3	28517
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LLTVWLPDSLTTWEIHGVSLSKSK	LLTVWLPDSLTTWEIHGVSLSKSK	3	LLTVWLPDSLTTWEIHGVSLSKSK3	23059.7	29960.2	21859.6
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LLTVWLPDSLTTWEIHGVSLSKSK	LLTVWLPDSLTTWEIHGVSLSKSK	4	LLTVWLPDSLTTWEIHGVSLSKSK4	39425.1	65914.7	44417.6
P70584	P70584	ACDSB_RAT	Acadsb	Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial	1	LLTYNAAR	LLTYNAAR	2	LLTYNAAR2	14202.3	10655.7	11297.6
F1M8H2	F1M8H2	F1M8H2_RAT	Wars2	tryptophan--tRNA ligase	1	LLVADAVIEK	LLVADAVIEK	2	LLVADAVIEK2	10898.6		11039.1
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	LLVAESCGALAPYLPK	LLVAESC(UniMod:4)GALAPYLPK	2	LLVAESC(UniMod:4)GALAPYLPK2	25779.6	34577.8	25424.9
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	LLVAPASGGK	LLVAPASGGK	2	LLVAPASGGK2	90743.7	79994.7	84520.2
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	LLVASHAR	LLVASHAR	2	LLVASHAR2	24390.3	20282.8	9656.17
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	LLVASTFTHSYPFCWR	LLVASTFTHSYPFC(UniMod:4)WR	3	LLVASTFTHSYPFC(UniMod:4)WR3	34275.5	36608.7	42353.7
A0A8I6AI88	A0A8I6AI88	A0A8I6AI88_RAT	Chpf2	Hexosyltransferase	1	LLVAVLTSR	LLVAVLTSR	2	LLVAVLTSR2	2493.31		3378.34
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	LLVCEDIDECQNGPVCQR	LLVC(UniMod:4)EDIDEC(UniMod:4)QNGPVC(UniMod:4)QR	3	LLVC(UniMod:4)EDIDEC(UniMod:4)QNGPVC(UniMod:4)QR3	14083.8	14056.1	13551.8
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	LLVCQMCIK	LLVC(UniMod:4)QMC(UniMod:4)IK	2	LLVC(UniMod:4)QMC(UniMod:4)IK2	213322	207970	202418
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	LLVDADNCLHR	LLVDADNC(UniMod:4)LHR	2	LLVDADNC(UniMod:4)LHR2	4781.1	9015.01	6521.21
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	LLVDADNCLHR	LLVDADNC(UniMod:4)LHR	3	LLVDADNC(UniMod:4)LHR3	84571.4	82656.1	73482.5
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	LLVDDER	LLVDDER	2	LLVDDER2	7434.7	19110.7	6219.36
Q6P799	Q6P799	SYSC_RAT	Sars1	Serine--tRNA ligase, cytoplasmic	1	LLVDEAIQK	LLVDEAIQK	2	LLVDEAIQK2	58568.8	60326.5	59299.6
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	LLVDSQLLQQLYQDSDDLK	LLVDSQLLQQLYQDSDDLK	3	LLVDSQLLQQLYQDSDDLK3	4258.55	4945.42	2115.5
G3V965	G3V965	G3V965_RAT	Agpat5	1-acylglycerol-3-phosphate O-acyltransferase 5	1	LLVEFYDSPDPER	LLVEFYDSPDPER	2	LLVEFYDSPDPER2	9860.92	10519.7	3521.87
G3V965	G3V965	G3V965_RAT	Agpat5	1-acylglycerol-3-phosphate O-acyltransferase 5	1	LLVEFYDSPDPERR	LLVEFYDSPDPERR	3	LLVEFYDSPDPERR3	275426	247187	211266
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	LLVEHQGVSFLLAEMAMK	LLVEHQGVSFLLAEMAMK	3	LLVEHQGVSFLLAEMAMK3	17692.2	22380.5	37698.5
F1LVX1	F1LVX1	F1LVX1_RAT	Dnajc1	DnaJ heat shock protein family (Hsp40) member C1	1	LLVELVQK	LLVELVQK	2	LLVELVQK2	22806.2	13859.1	
Q9WUD2	Q9WUD2	TRPV2_RAT	Trpv2	Transient receptor potential cation channel subfamily V member 2	1	LLVENGADVHLR	LLVENGADVHLR	3	LLVENGADVHLR3	7506.01	3978.74	9082.53
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	LLVENVR	LLVENVR	2	LLVENVR2	481147	480192	501064
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	LLVENVRK	LLVENVRK	2	LLVENVRK2	5494.6	9728.55	8130.97
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	LLVEQAK	LLVEQAK	2	LLVEQAK2	67642.5	65775.5	48992.8
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	LLVFATDDGFHFAGDGK	LLVFATDDGFHFAGDGK	2	LLVFATDDGFHFAGDGK2	4055.65		
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	LLVFATDDGFHFAGDGK	LLVFATDDGFHFAGDGK	3	LLVFATDDGFHFAGDGK3	93041.6	61256	71262.3
Q568Z3	Q568Z3	Q568Z3_RAT	Paqr4	Progestin and adipoQ receptor family member 4	1	LLVFGAR	LLVFGAR	2	LLVFGAR2	22679.8	32229.2	25432.5
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	LLVFSTDAGFHFAGDGK	LLVFSTDAGFHFAGDGK	2	LLVFSTDAGFHFAGDGK2	4835.12	5242.83	4354.26
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	LLVFSTDAGFHFAGDGK	LLVFSTDAGFHFAGDGK	3	LLVFSTDAGFHFAGDGK3	39788.9	23887.4	96312.1
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	LLVGNDDVHIIAR	LLVGNDDVHIIAR	3	LLVGNDDVHIIAR3	95310.8	78254.4	82218.9
Q6AXM8	Q6AXM8	PON2_RAT	Pon2	Serum paraoxonase/arylesterase 2	1	LLVGTLYQR	LLVGTLYQR	2	LLVGTLYQR2	93675.9	82433.1	69076.9
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	LLVGVDEK	LLVGVDEK	2	LLVGVDEK2	36448.5	32460.1	39619.6
Q63483	Q63483	Q63483_RAT	Rab38	Ras-related protein Rab	1	LLVIGDLGVGK	LLVIGDLGVGK	2	LLVIGDLGVGK2	82870	59442.5	75197.8
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	LLVILATEQPLPAK	LLVILATEQPLPAK	2	LLVILATEQPLPAK2	108104	91209	78480.4
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	LLVILATEQPLPAK	LLVILATEQPLPAK	3	LLVILATEQPLPAK3	22031.1	20832.6	19365.4
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	LLVILATEQPLPAKK	LLVILATEQPLPAKK	3	LLVILATEQPLPAKK3	16644.5	15100.1	14325.6
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	LLVISGIPTHLDEAVVR	LLVISGIPTHLDEAVVR	3	LLVISGIPTHLDEAVVR3	17319.1	19494.2	11181.5
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	LLVITVATAETEGYRR	LLVITVATAETEGYRR	3	LLVITVATAETEGYRR3	24219.8	23350.1	20344
O55173	O55173	PDPK1_RAT	Pdpk1	3-phosphoinositide-dependent protein kinase 1	1	LLVLDATK	LLVLDATK	2	LLVLDATK2	12053	17238.3	10974.8
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	LLVLEDENANVDEVELKPDTLIK	LLVLEDENANVDEVELKPDTLIK	3	LLVLEDENANVDEVELKPDTLIK3		21141.1	16758.3
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	LLVLITGGK	LLVLITGGK	2	LLVLITGGK2	29046.8	28993.2	22494.4
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	LLVLNSLK	LLVLNSLK	2	LLVLNSLK2	22241.2	15505.1	18324.1
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	LLVLYSGEDDELLRR	LLVLYSGEDDELLRR	3	LLVLYSGEDDELLRR3	44112.9	29305.9	37819.3
A0A8I6AML4	A0A8I6AML4	A0A8I6AML4_RAT	Galc	Galactocerebrosidase	1	LLVNYPEPYR	LLVNYPEPYR	2	LLVNYPEPYR2	5563.12	6604.09	
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	LLVPHIR	LLVPHIR	2	LLVPHIR2	49274.2	30876.7	36325.4
D4A0T9	D4A0T9	D4A0T9_RAT	Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	1	LLVPLLDGTECGVEK	LLVPLLDGTEC(UniMod:4)GVEK	2	LLVPLLDGTEC(UniMod:4)GVEK2	44511.8	33615.8	32074.2
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	LLVPLVPDLQDVAQLR	LLVPLVPDLQDVAQLR	2	LLVPLVPDLQDVAQLR2	46451.4	25700.8	40449.2
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	LLVPLVPDLQDVAQLR	LLVPLVPDLQDVAQLR	3	LLVPLVPDLQDVAQLR3	60609.4	45368.2	61293.6
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	LLVPSPEGMSEIYLR	LLVPSPEGMSEIYLR	2	LLVPSPEGMSEIYLR2	1.4835e+06	1.35051e+06	1.38936e+06
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	LLVPSPEGMSEIYLR	LLVPSPEGMSEIYLR	3	LLVPSPEGMSEIYLR3	58107.8	74159	83943.9
Q9WVK7	Q9WVK7	HCDH_RAT	Hadh	Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial	1	LLVPYLIEAIR	LLVPYLIEAIR	2	LLVPYLIEAIR2	13181.4	9130.96	12584.4
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	LLVQSIELQR	LLVQSIELQR	2	LLVQSIELQR2		3486.29	
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	LLVQSIELQRPR	LLVQSIELQRPR	3	LLVQSIELQRPR3	55188.6	34032.7	65041.6
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LLVSAGSLYPAVAK	LLVSAGSLYPAVAK	2	LLVSAGSLYPAVAK2	143167	197215	130562
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LLVSAGSLYPAVAK	LLVSAGSLYPAVAK	3	LLVSAGSLYPAVAK3	3.42687e+06	4.21263e+06	3.78889e+06
P54313	P54311;O35353;A0A8I6A9K0;P54313;P52287	GBB2_RAT	Gnb2	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2	0	LLVSASQDGK	LLVSASQDGK	2	LLVSASQDGK2	2.80653e+06	3.08472e+06	3.04825e+06
Q9JKC9	Q9JKC9	SYNRG_RAT	Synrg	Synergin gamma	1	LLVSCDISASGQEHIK	LLVSC(UniMod:4)DISASGQEHIK	3	LLVSC(UniMod:4)DISASGQEHIK3	3573.78	1165.38	
Q9Z2Z8	Q9Z2Z8	DHCR7_RAT	Dhcr7	7-dehydrocholesterol reductase	1	LLVSGFWGVAR	LLVSGFWGVAR	2	LLVSGFWGVAR2	41247.6	23325.1	22052.2
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	LLVSHGAEVTCK	LLVSHGAEVTC(UniMod:4)K	2	LLVSHGAEVTC(UniMod:4)K2	1352.68		
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	LLVSHGAEVTCK	LLVSHGAEVTC(UniMod:4)K	3	LLVSHGAEVTC(UniMod:4)K3	40786.3	50659.3	42121.8
Q6IRJ7	Q6IRJ7	Q6IRJ7_RAT	Anxa7	Annexin	1	LLVSMCQGNR	LLVSMC(UniMod:4)QGNR	2	LLVSMC(UniMod:4)QGNR2	51035.3	30598.9	38216.8
Q6IRJ7	Q6IRJ7	Q6IRJ7_RAT	Anxa7	Annexin	1	LLVSMCQGNRDESPSINHQMAQEDAQR	LLVSMC(UniMod:4)QGNRDESPSINHQMAQEDAQR	4	LLVSMC(UniMod:4)QGNRDESPSINHQMAQEDAQR4	14784.8	17969.4	19442.7
F1LZ05	F1LZ05	F1LZ05_RAT	Parp14	Poly [ADP-ribose] polymerase	1	LLVSPEGLNIR	LLVSPEGLNIR	2	LLVSPEGLNIR2		4714.29	6810.15
Q5XIK5	Q5XIK5	RN146_RAT	Rnf146	E3 ubiquitin-protein ligase RNF146	1	LLVSSANQTVAER	LLVSSANQTVAER	2	LLVSSANQTVAER2	3543.08	3089.1	3594.42
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LLVSSEDYGR	LLVSSEDYGR	2	LLVSSEDYGR2	1.27672e+06	1.24493e+06	1.33658e+06
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LLVSSEDYGRDLTGVQNLR	LLVSSEDYGRDLTGVQNLR	3	LLVSSEDYGRDLTGVQNLR3	2941.09	17169.1	15686.9
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	LLVSVLEQGLSPK	LLVSVLEQGLSPK	2	LLVSVLEQGLSPK2	23587.7	23228.5	21880.9
Q9Z2X3	Q9Z2X3	PSD10_RAT	Psmd10	26S proteasome non-ATPase regulatory subunit 10	1	LLVTQGASIYIENKEEK	LLVTQGASIYIENKEEK	3	LLVTQGASIYIENKEEK3	8986.61	6961.58	9540.29
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	LLVVDKETDEFFK	LLVVDKETDEFFK	2	LLVVDKETDEFFK2	23548.2	12892.2	10495.2
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	LLVVDKETDEFFK	LLVVDKETDEFFK	3	LLVVDKETDEFFK3	205981	220890	239052
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	LLVVDKETDEFFKK	LLVVDKETDEFFKK	3	LLVVDKETDEFFKK3	80349.9	85647	82613.1
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	LLVVDKETDEFFKK	LLVVDKETDEFFKK	4	LLVVDKETDEFFKK4	52405.3	63875.9	62698.1
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	LLVVDPETDEQLK	LLVVDPETDEQLK	2	LLVVDPETDEQLK2	122752	110789	125176
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	LLVVDPETDEQLKK	LLVVDPETDEQLKK	2	LLVVDPETDEQLKK2	42670.5	23280.7	14735.1
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	LLVVDPETDEQLKK	LLVVDPETDEQLKK	3	LLVVDPETDEQLKK3	182967	172898	192118
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	LLVVGITDPDPDIR	LLVVGITDPDPDIR	2	LLVVGITDPDPDIR2	19224.5	16569.8	8699.05
A0A0G2JV05	A0A0G2JV05	A0A0G2JV05_RAT	Mroh1	Maestro heat-like repeat family member 1	1	LLVVSSNPYLGDGR	LLVVSSNPYLGDGR	2	LLVVSSNPYLGDGR2	2877.35	4799.66	4163.09
P38983	A0A8I5ZZE2;P38983	RSSA_RAT	Rpsa	Small ribosomal subunit protein uS2	0	LLVVTDPR	LLVVTDPR	2	LLVVTDPR2	240562	161222	169055
P02091	P11517;P02091;O88752;A0A8I5ZV52	HBB1_RAT	Hbb	Hemoglobin subunit beta-1	0	LLVVYPWTQR	LLVVYPWTQR	2	LLVVYPWTQR2	3.63049e+06	3.84377e+06	4.06392e+06
P02091	P11517;P02091;O88752;A0A8I5ZV52	HBB1_RAT	Hbb	Hemoglobin subunit beta-1	0	LLVVYPWTQR	LLVVYPWTQR	3	LLVVYPWTQR3	18986.5	19297.7	14456.3
G3V6Q3	G3V6Q3	G3V6Q3_RAT	Wdr13	Uncharacterized protein	1	LLWAGDDR	LLWAGDDR	2	LLWAGDDR2	14735.4	15407.3	9398.16
P37727	P37727;A0A8I6AAJ7	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	0	LLWALYFNMR	LLWALYFNMR	2	LLWALYFNMR2	1868.89	1313.9	
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	LLWANKPDK	LLWANKPDK	2	LLWANKPDK2	67406.8	48743.3	61485.8
P01026	P01026	CO3_RAT	C3	Complement C3	1	LLWESGSLLR	LLWESGSLLR	2	LLWESGSLLR2	2.14451e+06	2.23286e+06	2.19983e+06
Q68FV6	Q68FV6	GLMP_RAT	Glmp	Glycosylated lysosomal membrane protein	1	LLWGSSPSGFMQWR	LLWGSSPSGFMQWR	2	LLWGSSPSGFMQWR2	2803.14	4240.01	
Q68FV6	Q68FV6	GLMP_RAT	Glmp	Glycosylated lysosomal membrane protein	1	LLWGSSPSGFMQWRPVAFSQEQR	LLWGSSPSGFMQWRPVAFSQEQR	3	LLWGSSPSGFMQWRPVAFSQEQR3	1632.59	2137.67	3774.87
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	LLWIDTK	LLWIDTK	2	LLWIDTK2	61951	51751.9	
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	LLWKDPR	LLWKDPR	2	LLWKDPR2	103735	117921	108835
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	LLWTDPR	LLWTDPR	2	LLWTDPR2	124031	106183	121097
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	LLWTIPK	LLWTIPK	2	LLWTIPK2	106590	88504	102724
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	LLWTLESLVTGR	LLWTLESLVTGR	2	LLWTLESLVTGR2	11332.6	15430.3	11178.6
Q6P0K8	Q6P0K8;Q9WU82	PLAK_RAT	Jup	Junction plakoglobin	0	LLWTTSR	LLWTTSR	2	LLWTTSR2	45758	30101.7	50097.7
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	LLWVIREDQGSEWK	LLWVIREDQGSEWK	3	LLWVIREDQGSEWK3		7106.09	
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	LLWVYMIR	LLWVYMIR	2	LLWVYMIR2	12938.1	22249.3	22668.1
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	LLWVYVIR	LLWVYVIR	2	LLWVYVIR2	31251.1	34694.9	22738.2
P07633	P07633	PCCB_RAT	Pccb	Propionyl-CoA carboxylase beta chain, mitochondrial	1	LLYAFAEATVPK	LLYAFAEATVPK	2	LLYAFAEATVPK2	14927.7	9501.56	8965.71
P57790	P57790	KEAP1_RAT	Keap1	Kelch-like ECH-associated protein 1	1	LLYAVGGFDGTNR	LLYAVGGFDGTNR	2	LLYAVGGFDGTNR2			2185.55
B0BNJ4	B0BNJ4	B0BNJ4_RAT	Ethe1	ETHE1, persulfide dioxygenase	1	LLYAVNTHCHADHITGSGVLR	LLYAVNTHC(UniMod:4)HADHITGSGVLR	4	LLYAVNTHC(UniMod:4)HADHITGSGVLR4	5691.75	6590.26	8697.6
D3ZHW0	A0A0G2JZH9;D3ZHW0	D3ZHW0_RAT	Dhx29	ATP-dependent RNA helicase DHX29	0	LLYCTTGVLLR	LLYC(UniMod:4)TTGVLLR	2	LLYC(UniMod:4)TTGVLLR2	4849.22	2629.85	4855.65
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	LLYDIWGDTVNIASR	LLYDIWGDTVNIASR	2	LLYDIWGDTVNIASR2	4254.53	12148	
P13803	P13803	ETFA_RAT	Etfa	Electron transfer flavoprotein subunit alpha, mitochondrial	1	LLYDLADQLHAAVGASR	LLYDLADQLHAAVGASR	2	LLYDLADQLHAAVGASR2	3138.08	1869.06	3004.86
P13803	P13803	ETFA_RAT	Etfa	Electron transfer flavoprotein subunit alpha, mitochondrial	1	LLYDLADQLHAAVGASR	LLYDLADQLHAAVGASR	3	LLYDLADQLHAAVGASR3	40751.1	30912.9	32918.7
Q66H84	Q66H84	MAPK3_RAT	Mapkapk3	MAP kinase-activated protein kinase 3	1	LLYDSPK	LLYDSPK	2	LLYDSPK2		54932.7	62109
D3ZAZ0	D3ZAZ0	D3ZAZ0_RAT	Eif3m	Eukaryotic translation initiation factor 3 subunit M	1	LLYEALVDCK	LLYEALVDC(UniMod:4)K	2	LLYEALVDC(UniMod:4)K2	58431.1	52218.7	65118.8
D3ZAZ0	D3ZAZ0	D3ZAZ0_RAT	Eif3m	Eukaryotic translation initiation factor 3 subunit M	1	LLYEALVDCKK	LLYEALVDC(UniMod:4)KK	2	LLYEALVDC(UniMod:4)KK2	5088.22	4684.42	5449.69
D3ZAZ0	D3ZAZ0	D3ZAZ0_RAT	Eif3m	Eukaryotic translation initiation factor 3 subunit M	1	LLYEALVDCKK	LLYEALVDC(UniMod:4)KK	3	LLYEALVDC(UniMod:4)KK3	131294	123477	132783
A0A8I6AHW7	A0A8I6AHW7	A0A8I6AHW7_RAT	Smap1	Small ArfGAP 1	1	LLYEANLPENFR	LLYEANLPENFR	2	LLYEANLPENFR2	42313	42896.2	59076.3
A0A8I6AHW7	A0A8I6AHW7	A0A8I6AHW7_RAT	Smap1	Small ArfGAP 1	1	LLYEANLPENFR	LLYEANLPENFR	3	LLYEANLPENFR3	3319.15	2989.95	
F1M7Q7	F1M7Q7	F1M7Q7_RAT	Otud4	ubiquitinyl hydrolase 1	1	LLYEIQNR	LLYEIQNR	2	LLYEIQNR2	16856	14099.2	10459.6
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	LLYELSNPEISK	LLYELSNPEISK	2	LLYELSNPEISK2	11731.7	18452.4	19149
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	LLYELVSIPK	LLYELVSIPK	2	LLYELVSIPK2	6250.76	11553	11572.4
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	LLYESPEWASR	LLYESPEWASR	2	LLYESPEWASR2	80186.1	79087	84480
A0A8I6AI88	A0A8I6AI88	A0A8I6AI88_RAT	Chpf2	Hexosyltransferase	1	LLYFTGQR	LLYFTGQR	2	LLYFTGQR2	13409.9	11555.6	8545.86
Q8CGU6	Q8CGU6	NICA_RAT	Ncstn	Nicastrin	1	LLYGFLVR	LLYGFLVR	2	LLYGFLVR2	80832.5	70169.7	84595.5
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	LLYGLASVK	LLYGLASVK	2	LLYGLASVK2	13660.1	1465.4	7118.45
B1WBW4	B1WBW4	ARM10_RAT	Armc10	Armadillo repeat-containing protein 10	1	LLYLLESTDDPIITEK	LLYLLESTDDPIITEK	2	LLYLLESTDDPIITEK2	32409.7	22300.8	29126
B1WBW4	B1WBW4	ARM10_RAT	Armc10	Armadillo repeat-containing protein 10	1	LLYLLESTDDPIITEK	LLYLLESTDDPIITEK	3	LLYLLESTDDPIITEK3	4066.31	6210.31	4702.29
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	LLYMHMLGYPAHFGQLECLK	LLYMHMLGYPAHFGQLEC(UniMod:4)LK	3	LLYMHMLGYPAHFGQLEC(UniMod:4)LK3	12074.8	11896.4	11765.4
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	LLYMHMLGYPAHFGQLECLK	LLYMHMLGYPAHFGQLEC(UniMod:4)LK	4	LLYMHMLGYPAHFGQLEC(UniMod:4)LK4	37410.6	35440.6	39122.1
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	LLYNLEMEQMAK	LLYNLEMEQMAK	2	LLYNLEMEQMAK2	26866.6	31815.3	27560.8
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	LLYNNVSNFGR	LLYNNVSNFGR	2	LLYNNVSNFGR2	1.38753e+06	1.43205e+06	1.472e+06
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	LLYNSMDPTLR	LLYNSMDPTLR	2	LLYNSMDPTLR2	43807.6	63582.3	47676.4
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	LLYNVEMEQMAK	LLYNVEMEQMAK	2	LLYNVEMEQMAK2	33050.6	33475.7	35083.9
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	LLYPADIPVGNDQLLELLNK	LLYPADIPVGNDQLLELLNK	3	LLYPADIPVGNDQLLELLNK3	6253.11	7008.37	2568.95
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	LLYPGYK	LLYPGYK	2	LLYPGYK2	156543	155098	146895
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	LLYPLLQIVCK	LLYPLLQIVC(UniMod:4)K	2	LLYPLLQIVC(UniMod:4)K2	7777.12	9086.14	8468.65
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	LLYPPETGLFLVR	LLYPPETGLFLVR	2	LLYPPETGLFLVR2	266835	234413	167115
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	LLYPPETGLFLVR	LLYPPETGLFLVR	3	LLYPPETGLFLVR3	3921.81	4003.72	4494.36
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	LLYPVAPPEPVEDR	LLYPVAPPEPVEDR	2	LLYPVAPPEPVEDR2	42346	34331.9	20831.3
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	LLYPVAPPEPVEDR	LLYPVAPPEPVEDR	3	LLYPVAPPEPVEDR3		1033.31	
M0R6S5	M0R6S5	M0R6S5_RAT	Chsy3	Hexosyltransferase	1	LLYSAAENQPPR	LLYSAAENQPPR	2	LLYSAAENQPPR2	2724.38	5033.78	3072.38
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	LLYSQGSLIDLLIK	LLYSQGSLIDLLIK	2	LLYSQGSLIDLLIK2	2562.95	3032.27	
P08650	P08650	CO5_RAT	C5	Complement C5	1	LLYSSYQNINIPVTQDMVPSAR	LLYSSYQNINIPVTQDMVPSAR	3	LLYSSYQNINIPVTQDMVPSAR3	402318	294468	293917
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	LLYSVGANVSAEK	LLYSVGANVSAEK	2	LLYSVGANVSAEK2	1790.85		3820.51
D3ZLM5	D3ZLM5	D3ZLM5_RAT	Nhlrc2	NHL repeat containing 2	1	LLYVADTNNHQIK	LLYVADTNNHQIK	3	LLYVADTNNHQIK3	7675.33	5884.58	7204.63
D3ZSC2	D3ZSC2	D3ZSC2_RAT	Pdcd2l	Programmed cell death 2-like	1	LLYVFACAR	LLYVFAC(UniMod:4)AR	2	LLYVFAC(UniMod:4)AR2	17209.7	16695.8	14295.8
A0A0G2JXD9	A0A0G2JXD9	A0A0G2JXD9_RAT	Dop1b	DOP1 leucine zipper like protein B	1	LLYYVFPYLR	LLYYVFPYLR	2	LLYYVFPYLR2	1224.21	2248.22	6494.11
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	LMAALLHTNTPSINQELCR	LMAALLHTNTPSINQELC(UniMod:4)R	3	LMAALLHTNTPSINQELC(UniMod:4)R3	9246.55	10033.8	10254.6
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	LMAAMEIFSAQQQEDIKDEDEREAR	LMAAMEIFSAQQQEDIKDEDEREAR	4	LMAAMEIFSAQQQEDIKDEDEREAR4	14756.5	12539.2	10622.3
A0A8I5ZYV2	A0A8I5ZYV2	A0A8I5ZYV2_RAT	Rgp1	RGP1 homolog, RAB6A GEF complex partner 1	1	LMAATSCR	LMAATSC(UniMod:4)R	2	LMAATSC(UniMod:4)R2		4896.19	4495.28
Q9R1B1	Q9R1B1	T10B_RAT	Timm10b	Mitochondrial import inner membrane translocase subunit Tim10 B	1	LMAAYVHLMPALVQR	LMAAYVHLMPALVQR	3	LMAAYVHLMPALVQR3	7639.19	4979.52	6158.12
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	LMADELER	LMADELER	2	LMADELER2	12277.2	15352.4	18500.7
Q811U3	Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	1	LMADNYEDDHFR	LMADNYEDDHFR	3	LMADNYEDDHFR3	7890.05	12197.3	17103.6
P42335	P17105;P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	0	LMADVLR	LMADVLR	2	LMADVLR2	16287.9	18039.1	7319.43
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	LMADVLRPFVPAYHGDVVK	LMADVLRPFVPAYHGDVVK	3	LMADVLRPFVPAYHGDVVK3	25655.8	20799.6	26962.6
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	LMADVLRPFVPAYHGDVVK	LMADVLRPFVPAYHGDVVK	4	LMADVLRPFVPAYHGDVVK4	52399.5	42132	47587.8
D4AE80	D4AE80	D4AE80_RAT	Dcp1a	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	LMADVVEEEAR	LMADVVEEEAR	2	LMADVVEEEAR2	6649.72	5247.61	11905.1
D4AE80	D4AE80	D4AE80_RAT	Dcp1a	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	LMADVVEEEARR	LMADVVEEEARR	3	LMADVVEEEARR3	63082.1	38452	43999.8
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	LMAEALAMIESTQQAR	LMAEALAMIESTQQAR	2	LMAEALAMIESTQQAR2	32282.1	16800.6	33718.7
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	LMAEALAMIESTQQAR	LMAEALAMIESTQQAR	3	LMAEALAMIESTQQAR3	30573.4	25274.5	33908.2
A0A8I6ATH0	A0A8I6ATH0	A0A8I6ATH0_RAT	Braf	non-specific serine/threonine protein kinase	1	LMAECLK	LMAEC(UniMod:4)LK	2	LMAEC(UniMod:4)LK2	24117.8	18105.5	26833.5
F1M9Q3	F1M9Q3	F1M9Q3_RAT	Ltn1	E3 ubiquitin-protein ligase listerin	1	LMAELPQHDQDNLK	LMAELPQHDQDNLK	3	LMAELPQHDQDNLK3	13995	16097.6	24563.9
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	LMAFDTR	LMAFDTR	2	LMAFDTR2	295750	314729	312840
Q6AY23	Q6AY23	P5CR2_RAT	Pycr2	Pyrroline-5-carboxylate reductase 2	1	LMAFQPAPK	LMAFQPAPK	2	LMAFQPAPK2	41936.1	34796.1	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LMALGPIR	LMALGPIR	2	LMALGPIR2	79326.3	84314.5	75777.1
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LMALGPIRLEQDQTTAQLQVQK	LMALGPIRLEQDQTTAQLQVQK	3	LMALGPIRLEQDQTTAQLQVQK3	1818.22	4374.3	5254.78
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	LMAQVLCELFQTAPQR	LMAQVLC(UniMod:4)ELFQTAPQR	2	LMAQVLC(UniMod:4)ELFQTAPQR2	3790.15	7492.96	7154.25
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	LMAQVLCELFQTAPQR	LMAQVLC(UniMod:4)ELFQTAPQR	3	LMAQVLC(UniMod:4)ELFQTAPQR3	15052.3	11400	9649.96
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	LMASLSDFR	LMASLSDFR	2	LMASLSDFR2	677946	697083	730866
Q5FVC7	Q5FVC7	ACAP2_RAT	Acap2	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2	1	LMCELGNDVINR	LMC(UniMod:4)ELGNDVINR	2	LMC(UniMod:4)ELGNDVINR2	12617.2	13621	10288.8
P81795	C9WPN6;P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	0	LMCKPIFSK	LMC(UniMod:4)KPIFSK	2	LMC(UniMod:4)KPIFSK2	5082.53	5916.58	5107.42
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	LMCMGDIK	LMC(UniMod:4)MGDIK	2	LMC(UniMod:4)MGDIK2	24217.6	23985.4	27570.9
D3ZF13	D3ZF13	D3ZF13_RAT	Ndufab1	Acyl carrier protein	1	LMCPQEIVDYIADK	LMC(UniMod:4)PQEIVDYIADK	2	LMC(UniMod:4)PQEIVDYIADK2	207930	276032	236032
D3ZF13	D3ZF13	D3ZF13_RAT	Ndufab1	Acyl carrier protein	1	LMCPQEIVDYIADK	LMC(UniMod:4)PQEIVDYIADK	3	LMC(UniMod:4)PQEIVDYIADK3		10100.3	11284.8
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	LMCSSLR	LMC(UniMod:4)SSLR	2	LMC(UniMod:4)SSLR2	150982	155796	141653
Q4V7D2	Q4V7D2	ROGDI_RAT	Rogdi	Protein rogdi homolog	1	LMDAVMLQLTR	LMDAVMLQLTR	2	LMDAVMLQLTR2	3638.77	5765.13	4245.86
G3V7L4	G3V7L4	G3V7L4_RAT	Cdh16	Cadherin 16	1	LMDFAIEEGDPTGIFDLSR	LMDFAIEEGDPTGIFDLSR	3	LMDFAIEEGDPTGIFDLSR3	10585.7	4959.03	
Q5PPI8	Q5PPI8	Q5PPI8_RAT	Rmc1	Regulator of MON1-CCZ1	1	LMDFLLQR	LMDFLLQR	2	LMDFLLQR2	8320.04	12469.5	12684.4
A0A8J8YNE4	A0A8J8YNE4	A0A8J8YNE4_RAT	Apool	MICOS complex subunit	1	LMDHGQSHPDDKDMYSTR	LMDHGQSHPDDKDMYSTR	3	LMDHGQSHPDDKDMYSTR3	6733.28	2463.85	1881.36
A0A8J8YNE4	A0A8J8YNE4	A0A8J8YNE4_RAT	Apool	MICOS complex subunit	1	LMDHGQSHPDDKDMYSTR	LMDHGQSHPDDKDMYSTR	4	LMDHGQSHPDDKDMYSTR4	27395.7	39757.8	40122.1
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	LMDHICAACGQVQHLQK	LMDHIC(UniMod:4)AAC(UniMod:4)GQVQHLQK	4	LMDHIC(UniMod:4)AAC(UniMod:4)GQVQHLQK4	5208.85	7544.47	7810.47
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	LMDHVGTEPSIK	LMDHVGTEPSIK	2	LMDHVGTEPSIK2	6662.01	5634.07	1067.07
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	LMDHVGTEPSIK	LMDHVGTEPSIK	3	LMDHVGTEPSIK3	127392	97747	100313
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	LMDHVGTEPSIKEDQVIQLMNTIFSK	LMDHVGTEPSIKEDQVIQLMNTIFSK	4	LMDHVGTEPSIKEDQVIQLMNTIFSK4	17206.2	28809.3	16138.2
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	LMDKEQQVADLQLK	LMDKEQQVADLQLK	3	LMDKEQQVADLQLK3	30413.6	27672.6	24449.5
A0A8I5ZP57	A0A8I5ZP57	A0A8I5ZP57_RAT	Pkdcc	Protein kinase domain containing, cytoplasmic	1	LMDLAPGGPGLQR	LMDLAPGGPGLQR	2	LMDLAPGGPGLQR2	62187.4	65725.9	57500
Q62825	Q62825	EXOC3_RAT	Exoc3	Exocyst complex component 3	1	LMDLECSR	LMDLEC(UniMod:4)SR	2	LMDLEC(UniMod:4)SR2	25498.1	23620.6	23829.8
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	LMDLLADSR	LMDLLADSR	2	LMDLLADSR2	617859	654237	617496
A0A0G2K1D2	A0A0G2K1D2	A0A0G2K1D2_RAT	Rap1gds1	Rap1 GTPase-GDP dissociation stimulator 1	1	LMDLLDR	LMDLLDR	2	LMDLLDR2	20233	16998.5	23775.5
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	LMDLLEEGLR	LMDLLEEGLR	2	LMDLLEEGLR2	36719.7	27419.5	27044.6
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	LMDLLEEGLRR	LMDLLEEGLRR	3	LMDLLEEGLRR3	162105	166528	179054
Q9Z1L0	Q9Z1L0	PK3CB_RAT	Pik3cb	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform	1	LMDLLWK	LMDLLWK	2	LMDLLWK2	9943.33	14391.5	
Q4V8K3	Q4V8K3;A0A8I6A9B2;A0A0G2K7P4	NAA11_RAT	Naa11	N-alpha-acetyltransferase 11	0	LMDQASR	LMDQASR	2	LMDQASR2	102440	96103	106095
A0A8I6A5Y0	A0A8I6A5Y0	A0A8I6A5Y0_RAT	Vta1	Vesicle trafficking 1	1	LMDQLEALK	LMDQLEALK	2	LMDQLEALK2	26205.2	12150.9	18571.5
A0A8I6A5Y0	A0A8I6A5Y0	A0A8I6A5Y0_RAT	Vta1	Vesicle trafficking 1	1	LMDQLEALKK	LMDQLEALKK	3	LMDQLEALKK3	25517.3	19475.9	29877.4
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	LMDQNLK	LMDQNLK	1	LMDQNLK1	63937.2	57829.2	64041.7
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	LMDQNLK	LMDQNLK	2	LMDQNLK2	1.11469e+07	1.16855e+07	1.30192e+07
Q498R7	Q498R7	CZIB_RAT	Czib	CXXC motif containing zinc binding protein	1	LMDSVALK	LMDSVALK	2	LMDSVALK2	15874.6	9301.82	15530
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	LMDTNAK	LMDTNAK	2	LMDTNAK2		67772.8	
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	LMDVGLIAIR	LMDVGLIAIR	2	LMDVGLIAIR2	115549	82282.1	108428
A0A8I6AVZ7	A0A8I6AVZ7	A0A8I6AVZ7_RAT	Mtcl1	Microtubule crosslinking factor 1	1	LMDVSPFLPEK	LMDVSPFLPEK	2	LMDVSPFLPEK2	5579.13	2381.15	5961.04
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	LMDYSLLVGIHDVER	LMDYSLLVGIHDVER	2	LMDYSLLVGIHDVER2	7096.45		
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	LMDYSLLVGIHDVER	LMDYSLLVGIHDVER	3	LMDYSLLVGIHDVER3	76023.3	98362.5	87339.4
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LMEADIAIQGDK	LMEADIAIQGDK	2	LMEADIAIQGDK2	30089.4	31816.9	38393.4
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LMEADIAIQGDKVK	LMEADIAIQGDKVK	3	LMEADIAIQGDKVK3	17043	23381	18930.3
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	LMEAFFK	LMEAFFK	2	LMEAFFK2	27946.7	33724.3	29063
Q3B7U4	Q3B7U4	CTU2_RAT	Ctu2	Cytoplasmic tRNA 2-thiolation protein 2	1	LMEAFILK	LMEAFILK	2	LMEAFILK2	7445.52	6811.47	
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	LMEALFPEGPER	LMEALFPEGPER	2	LMEALFPEGPER2	422084	465102	440734
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	LMEALFPEGPER	LMEALFPEGPER	3	LMEALFPEGPER3	8255.68	13919.5	13464.8
Q63616	Q63616	VP33B_RAT	Vps33b	Vacuolar protein sorting-associated protein 33B	1	LMEAMSEVKS	LMEAMSEVKS	2	LMEAMSEVKS2	5971.86	4492.69	
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	LMEECKR	LMEEC(UniMod:4)KR	2	LMEEC(UniMod:4)KR2			15139.1
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	LMEFNLGTDK	LMEFNLGTDK	2	LMEFNLGTDK2	15166.8	11345	7806.22
A0A0G2JV35	A0A0G2JV35	A0A0G2JV35_RAT	Naa80	N(alpha)-acetyltransferase 80, NatH catalytic subunit	1	LMEGLEAFAR	LMEGLEAFAR	2	LMEGLEAFAR2	2926.07	3724.52	
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	LMEIDQK	LMEIDQK	2	LMEIDQK2	57856.6	48022.8	49992.1
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	LMEIITVENPK	LMEIITVENPK	2	LMEIITVENPK2	4209.23	3375.27	873.289
Q4V7C6	Q4V7C6	GUAA_RAT	Gmps	GMP synthase [glutamine-hydrolyzing]	1	LMEITSQHSLNAFLLPIK	LMEITSQHSLNAFLLPIK	3	LMEITSQHSLNAFLLPIK3	1173.32	1516.55	2961.24
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	LMELACNTK	LMELAC(UniMod:4)NTK	2	LMELAC(UniMod:4)NTK2	36661.3	51226.4	18411.6
Q6P7P5	Q6P7P5	5MP2_RAT	Bzw1	eIF5-mimic protein 2	1	LMELFPANK	LMELFPANK	2	LMELFPANK2	308785	270762	282575
P49242	P49242;M0R6L4	RS3A_RAT	Rps3a	Small ribosomal subunit protein eS1	0	LMELHGEGGSSGK	LMELHGEGGSSGK	2	LMELHGEGGSSGK2	3352.6	3157.28	
P49242	P49242;M0R6L4	RS3A_RAT	Rps3a	Small ribosomal subunit protein eS1	0	LMELHGEGGSSGK	LMELHGEGGSSGK	3	LMELHGEGGSSGK3	72188	81994.9	50754.2
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	LMELNLEIR	LMELNLEIR	2	LMELNLEIR2	10155.6	16705.4	14776.9
A0A8I6B3N0	A0A8I6B3N0;E9PSK7	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	0	LMELQEAVR	LMELQEAVR	2	LMELQEAVR2	22823.8	43813	18602.1
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	LMELSATR	LMELSATR	2	LMELSATR2	83819.5	88634.4	80709.9
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	LMEMYNNVFCPPMK	LMEMYNNVFC(UniMod:4)PPMK	2	LMEMYNNVFC(UniMod:4)PPMK2	29918	24577.5	15268.2
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	LMENTEDWRPR	LMENTEDWRPR	3	LMENTEDWRPR3	141572	154465	142997
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	LMEQACNIK	LMEQAC(UniMod:4)NIK	2	LMEQAC(UniMod:4)NIK2	15972.2	14971.6	10219
A0A8I5ZNC8	A0A8I5ZNC8	A0A8I5ZNC8_RAT	Tbc1d9	TBC1 domain family member 9	1	LMEQLANIAMR	LMEQLANIAMR	2	LMEQLANIAMR2	6694.84	7661.04	9165.91
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	LMESYCETWR	LMESYC(UniMod:4)ETWR	2	LMESYC(UniMod:4)ETWR2	4079.27		2010.02
Q3T1I9	Q3T1I9	RPAP1_RAT	Rpap1	RNA polymerase II-associated protein 1	1	LMETIVR	LMETIVR	2	LMETIVR2	10495.3	9955.66	
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	LMEVLQGLQEQLTK	LMEVLQGLQEQLTK	2	LMEVLQGLQEQLTK2	27997.3	18731.8	19370.7
A1L1J9	A1L1J9	LMF2_RAT	Lmf2	Lipase maturation factor 2	1	LMFASGVVK	LMFASGVVK	2	LMFASGVVK2	28623.9	33105.1	26049.6
Q6AYT3	Q6AYT3	RTCB_RAT	Rtcb	RNA-splicing ligase RtcB homolog	1	LMFEELR	LMFEELR	2	LMFEELR2	59145.9	33774.9	44919.6
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	LMFEQQK	LMFEQQK	2	LMFEQQK2	49575	62211.6	61456.7
Q6P7Q1	Q6P7Q1	BABA2_RAT	Babam2	BRISC and BRCA1-A complex member 2	1	LMFEYQTLLEEPQYGENMEIYAGK	LMFEYQTLLEEPQYGENMEIYAGK	3	LMFEYQTLLEEPQYGENMEIYAGK3	10325.9	6815.74	7462.42
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	LMFHVDNGAGR	LMFHVDNGAGR	3	LMFHVDNGAGR3	11182.3	12924.3	21015.4
D4A105	D4A105	D4A105_RAT	Tmem63b	Transmembrane protein 63B	1	LMFLDAER	LMFLDAER	2	LMFLDAER2	11579.9	19285.9	12183.1
E9PU03	E9PU03	E9PU03_RAT	Smg5	Nonsense-mediated mRNA decay factor	1	LMFLHPVDYGR	LMFLHPVDYGR	3	LMFLHPVDYGR3	22248.6	23580.8	16621.8
G3V8G2	G3V8G2	G3V8G2_RAT	Psmd5	26S proteasome non-ATPase regulatory subunit 5	1	LMFNSPGFVEFVMDR	LMFNSPGFVEFVMDR	2	LMFNSPGFVEFVMDR2		20185.2	
Q63369	Q63369	NFKB1_RAT	Nfkb1	Nuclear factor NF-kappa-B p105 subunit	1	LMFTAFLPDSTGSFTR	LMFTAFLPDSTGSFTR	2	LMFTAFLPDSTGSFTR2	18204.8	16123.7	14044.3
Q6P6S0	Q6P6S0	SNP47_RAT	Snap47	Synaptosomal-associated protein 47	1	LMGCTTHQELPTGGQEGQQSQLQK	LMGC(UniMod:4)TTHQELPTGGQEGQQSQLQK	3	LMGC(UniMod:4)TTHQELPTGGQEGQQSQLQK3	1158.23	743.359	1426.6
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	LMGDEPDLDPDINK	LMGDEPDLDPDINK	2	LMGDEPDLDPDINK2	84700	100207	86299.6
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	LMGDLGQLIFLEWDAR	LMGDLGQLIFLEWDAR	2	LMGDLGQLIFLEWDAR2		4043.36	7103.99
D3ZG88	D3ZG88	D3ZG88_RAT	Znrd2	Zinc ribbon domain containing 2	1	LMGDYLLR	LMGDYLLR	2	LMGDYLLR2	83111.4	86451.1	76930.4
B0BN18	B0BN18	PFD2_RAT	Pfdn2	Prefoldin subunit 2	1	LMGEDEKPAAK	LMGEDEKPAAK	2	LMGEDEKPAAK2	23025.4	15832.8	19175.8
B0BN18	B0BN18	PFD2_RAT	Pfdn2	Prefoldin subunit 2	1	LMGEDEKPAAK	LMGEDEKPAAK	3	LMGEDEKPAAK3	87321.9	85210	103816
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	LMGKPHPLVTSTDIVLTITK	LMGKPHPLVTSTDIVLTITK	4	LMGKPHPLVTSTDIVLTITK4	8526.22	9126.39	15383.4
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	LMGLEALK	LMGLEALK	2	LMGLEALK2	839964	812689	771242
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	LMGPLGPPGGPPHELEVEAQDGGSPPR	LMGPLGPPGGPPHELEVEAQDGGSPPR	3	LMGPLGPPGGPPHELEVEAQDGGSPPR3	15413	26674.8	12189.4
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	LMGSILGVK	LMGSILGVK	2	LMGSILGVK2	42101.5	35531.1	32967.5
P13941	P13941	CO3A1_RAT	Col3a1	Collagen alpha-1(III) chain	1	LMGSNEGEFK	LMGSNEGEFK	2	LMGSNEGEFK2	25990	36621.1	31211.4
Q9ESC1	Q9ESC1	AGRL4_RAT	Adgrl4	Adhesion G protein-coupled receptor L4	1	LMHAAEHVTLQISQNIQK	LMHAAEHVTLQISQNIQK	3	LMHAAEHVTLQISQNIQK3	4906.94	4948.8	
Q9ESC1	Q9ESC1	AGRL4_RAT	Adgrl4	Adhesion G protein-coupled receptor L4	1	LMHAAEHVTLQISQNIQK	LMHAAEHVTLQISQNIQK	4	LMHAAEHVTLQISQNIQK4	4140.73	5026.81	10289.5
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	LMHGSGKEETNIEAK	LMHGSGKEETNIEAK	3	LMHGSGKEETNIEAK3	33242.5	31000.8	17985.1
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	LMHGSGKEETNIEAK	LMHGSGKEETNIEAK	4	LMHGSGKEETNIEAK4	13728.8	10383.5	7299.27
D3ZS41	D3ZS41	D3ZS41_RAT	Ecm2	Extracellular matrix protein 2	1	LMHLNMDGNNLVHIPSELPSTLEELK	LMHLNMDGNNLVHIPSELPSTLEELK	4	LMHLNMDGNNLVHIPSELPSTLEELK4		13473.7	5728.62
Q9Z0J5	Q9Z0J5	TRXR2_RAT	Txnrd2	Thioredoxin reductase 2, mitochondrial	1	LMHQAALLGGMIR	LMHQAALLGGMIR	3	LMHQAALLGGMIR3	33611.5	29114.7	55209.9
O89049	O89049	TRXR1_RAT	Txnrd1	Thioredoxin reductase 1, cytoplasmic	1	LMHQAALLGQALK	LMHQAALLGQALK	3	LMHQAALLGQALK3	5420.92	8746.29	6397.97
P14270	P14270	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	1	LMHSSSLTNSCIPR	LMHSSSLTNSC(UniMod:4)IPR	2	LMHSSSLTNSC(UniMod:4)IPR2	3835.41	3827.38	3683.5
P14270	P14270	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	1	LMHSSSLTNSCIPR	LMHSSSLTNSC(UniMod:4)IPR	3	LMHSSSLTNSC(UniMod:4)IPR3	42918.9	47759.2	40283.9
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LMHVAYEEFEK	LMHVAYEEFEK	2	LMHVAYEEFEK2	15198.9	14905.8	16207.4
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LMHVAYEEFEK	LMHVAYEEFEK	3	LMHVAYEEFEK3	49392.4	56420.4	57387.1
F1MAR6	F1MAR6	F1MAR6_RAT	Prodh	Proline dehydrogenase	1	LMIDAEQSYFQPAISR	LMIDAEQSYFQPAISR	2	LMIDAEQSYFQPAISR2	6333.03	6216.77	2566.57
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	LMITDAAR	LMITDAAR	2	LMITDAAR2	91461.3	80267.4	81864.8
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	LMITGAAPISTPVLTFFR	LMITGAAPISTPVLTFFR	2	LMITGAAPISTPVLTFFR2	16135.2	14121	25540.1
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	LMITGAAPISTPVLTFFR	LMITGAAPISTPVLTFFR	3	LMITGAAPISTPVLTFFR3	5944.57	2399.85	5596.5
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	LMITGAAPVSATVLTFLR	LMITGAAPVSATVLTFLR	2	LMITGAAPVSATVLTFLR2	9186.9	6636.8	7332.56
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	LMITGAAPVSATVLTFLR	LMITGAAPVSATVLTFLR	3	LMITGAAPVSATVLTFLR3	7716.73	4604.17	4030.32
D3ZHM9	D3ZHM9	D3ZHM9_RAT	ENSRNOG00000068649	Ig-like domain-containing protein	1	LMIYGATNLAAGVPSR	LMIYGATNLAAGVPSR	2	LMIYGATNLAAGVPSR2	64652.2	42554	43693.9
D3ZHM9	D3ZHM9	D3ZHM9_RAT	ENSRNOG00000068649	Ig-like domain-containing protein	1	LMIYGATNLAAGVPSR	LMIYGATNLAAGVPSR	3	LMIYGATNLAAGVPSR3	11107.8	13801.8	17741.9
A0A8J8XVI1	A0A8J8XVI1	A0A8J8XVI1_RAT	ENSRNOG00000070169	Ig-like domain-containing protein	1	LMIYGATNLANGVPSR	LMIYGATNLANGVPSR	2	LMIYGATNLANGVPSR2	43084.1	34824.2	30426.7
A0A8J8XVH8	A0A8J8XVH8;A0A8I5ZTT6	A0A8J8XVH8_RAT	ENSRNOG00000068221	Ig-like domain-containing protein	0	LMIYGATNLEDGVPSR	LMIYGATNLEDGVPSR	2	LMIYGATNLEDGVPSR2	83888.9	65314.5	64941.2
A0A8J8XVH8	A0A8J8XVH8;A0A8I5ZTT6	A0A8J8XVH8_RAT	ENSRNOG00000068221	Ig-like domain-containing protein	0	LMIYGATNLEDGVPSR	LMIYGATNLEDGVPSR	3	LMIYGATNLEDGVPSR3	47119.8	35087.4	38010.8
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	LMLCAENR	LMLC(UniMod:4)AENR	2	LMLC(UniMod:4)AENR2	189207	188630	172417
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	LMLCAENRK	LMLC(UniMod:4)AENRK	2	LMLC(UniMod:4)AENRK2	8155.34	13211.3	2474.89
Q63598	Q63598	PLST_RAT	Pls3	Plastin-3	1	LMLDGDR	LMLDGDR	2	LMLDGDR2	19373.1	26246.3	28925.4
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	LMLDTWNESIFSNIK	LMLDTWNESIFSNIK	2	LMLDTWNESIFSNIK2		7718.81	
Q6AXM6	Q6AXM6	Q6AXM6_RAT	Icam2	Intercellular adhesion molecule 2	1	LMLEEDPHGK	LMLEEDPHGK	2	LMLEEDPHGK2	6143	4962.44	
Q6AXM6	Q6AXM6	Q6AXM6_RAT	Icam2	Intercellular adhesion molecule 2	1	LMLEEDPHGK	LMLEEDPHGK	3	LMLEEDPHGK3	19200.9	9206.04	14975.9
Q7TP01	Q7TP01	Q7TP01_RAT	Saal1	Bq135360	1	LMLEWIR	LMLEWIR	2	LMLEWIR2	8710.46	4811.1	8846.9
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	LMLEWQFQK	LMLEWQFQK	2	LMLEWQFQK2	14538.3	27442.6	11351
Q5PQX0	Q5PQX0	UXS1_RAT	Uxs1	UDP-glucuronic acid decarboxylase 1	1	LMLGWEPVVPLEEGLNK	LMLGWEPVVPLEEGLNK	2	LMLGWEPVVPLEEGLNK2	25179.3	16660.4	22533.8
Q5PQX0	Q5PQX0	UXS1_RAT	Uxs1	UDP-glucuronic acid decarboxylase 1	1	LMLGWEPVVPLEEGLNK	LMLGWEPVVPLEEGLNK	3	LMLGWEPVVPLEEGLNK3	15320.4	12740.2	14333.2
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	LMLHMHVDRDPQEQVTPVK	LMLHMHVDRDPQEQVTPVK	4	LMLHMHVDRDPQEQVTPVK4	15529.8	13029.8	9388.54
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	LMLHMHVDRDPQESVVPVR	LMLHMHVDRDPQESVVPVR	4	LMLHMHVDRDPQESVVPVR4	8530.16	9019.03	7025.11
B2GV54	B2GV54	NCEH1_RAT	Nceh1	Neutral cholesterol ester hydrolase 1	1	LMLLDATFR	LMLLDATFR	2	LMLLDATFR2	28709.6	28853.4	34371.5
Q9Z1P2	Q9QXQ0;Q8R4I6;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	LMLLLEVISGER	LMLLLEVISGER	2	LMLLLEVISGER2	729779	795486	695453
Q9Z1P2	Q9QXQ0;Q8R4I6;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	LMLLLEVISGER	LMLLLEVISGER	3	LMLLLEVISGER3	40643.7	38159.3	35692.2
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	LMLLLEVISGERLPKPER	LMLLLEVISGERLPKPER	4	LMLLLEVISGERLPKPER4	14465	11535.7	22125.6
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	LMLLQIK	LMLLQIK	2	LMLLQIK2	69012.9	59664.3	50366.3
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	LMLMSGR	LMLMSGR	2	LMLMSGR2	16765.9	8234.39	
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	LMLPEEPPSAPPK	LMLPEEPPSAPPK	2	LMLPEEPPSAPPK2	6568.03	3610.96	9820.36
O08770	O08770	GPV_RAT	Gp5	Platelet glycoprotein V	1	LMLSDSHISAIDPGTFNDLVK	LMLSDSHISAIDPGTFNDLVK	3	LMLSDSHISAIDPGTFNDLVK3	1.60598e+06	1.65786e+06	1.71045e+06
F1M842	F1M842	F1M842_RAT	Tp53bp1	Tumor protein p53 binding protein 1	1	LMLSTSECSQSSK	LMLSTSEC(UniMod:4)SQSSK	2	LMLSTSEC(UniMod:4)SQSSK2	7460.43	3342.32	5684.93
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	LMLWDAK	LMLWDAK	2	LMLWDAK2	52333.6	36503.4	57864.7
Q32PY2	Q32PY2	LIPH_RAT	Liph	Lipase member H	1	LMLYTQR	LMLYTQR	2	LMLYTQR2	19736.2	10681.2	25817.6
A0A8I6AHQ9	A0A8I6AHQ9	A0A8I6AHQ9_RAT	Xpot	Exportin-T	1	LMMAQDEER	LMMAQDEER	2	LMMAQDEER2	13782.9	11069	9189.65
Q5PQX0	Q5PQX0	UXS1_RAT	Uxs1	UDP-glucuronic acid decarboxylase 1	1	LMMDGHEVTVVDNFFTGR	LMMDGHEVTVVDNFFTGR	3	LMMDGHEVTVVDNFFTGR3	14768.4	9641.35	24056.9
Q7TP47	Q7TP47	HNRPQ_RAT	Syncrip	Heterogeneous nuclear ribonucleoprotein Q	1	LMMDPLTGLNR	LMMDPLTGLNR	2	LMMDPLTGLNR2	37288.4	33865.1	47463.3
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	LMMLQHK	LMMLQHK	2	LMMLQHK2	8991.65	4407.71	4460.61
Q32KJ5	Q32KJ5	Q32KJ5_RAT	Gns	N-acetylglucosamine-6-sulfatase	1	LMMLQSCSGPTCR	LMMLQSC(UniMod:4)SGPTC(UniMod:4)R	2	LMMLQSC(UniMod:4)SGPTC(UniMod:4)R2	23475.5	22003.3	29681.5
A0A0G2JZH0	Q5XIJ7;A0A0G2JZH0	A0A0G2JZH0_RAT	Cab39	Calcium binding protein 39	0	LMMNLLR	LMMNLLR	2	LMMNLLR2	65701.1	58343.5	72173.5
P69478	P69478	CHSTB_RAT	Chst11	Carbohydrate sulfotransferase 11	1	LMMVLSGR	LMMVLSGR	2	LMMVLSGR2		8534.04	15305.5
G3V7P1	G3V7P1	STX12_RAT	Stx12	Syntaxin-12	1	LMNDFSSALNNFQVVQR	LMNDFSSALNNFQVVQR	3	LMNDFSSALNNFQVVQR3	40581.6	43568.6	57155.8
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	LMNDMTAVALNYGIYK	LMNDMTAVALNYGIYK	2	LMNDMTAVALNYGIYK2	22367.1	14580.3	15787
B5DF55	B5DF55	B5DF55_RAT	Stam	Signal transducing adaptor molecule	1	LMNEDPVYSVYAK	LMNEDPVYSVYAK	2	LMNEDPVYSVYAK2	29453	34263.3	29315.6
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	LMNESLMLVTALNPHIGYDK	LMNESLMLVTALNPHIGYDK	3	LMNESLMLVTALNPHIGYDK3	57376.6	71023.5	69731
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	LMNESLMLVTALNPHIGYDK	LMNESLMLVTALNPHIGYDK	4	LMNESLMLVTALNPHIGYDK4		2736.07	5709.59
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	LMNETTAVALAYGIYK	LMNETTAVALAYGIYK	2	LMNETTAVALAYGIYK2	46715.2	29190	33750.2
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	LMNETTAVALAYGIYK	LMNETTAVALAYGIYK	3	LMNETTAVALAYGIYK3	114873	135828	140577
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	LMNETTAVALAYGIYKQDLPALEEKPR	LMNETTAVALAYGIYKQDLPALEEKPR	4	LMNETTAVALAYGIYKQDLPALEEKPR4		6615.75	12964.3
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	LMNFMYFQR	LMNFMYFQR	2	LMNFMYFQR2	113332	129807	146639
D4A6B3	D4A6B3	D4A6B3_RAT	Slamf6	SLAM family member 6	1	LMNGILGESIVLPLELPAGK	LMNGILGESIVLPLELPAGK	3	LMNGILGESIVLPLELPAGK3	9241.93		
B1H282	B1H282	B1H282_RAT	Colgalt1	Collagen beta(1-O)galactosyltransferase 1	1	LMNLMQDVER	LMNLMQDVER	2	LMNLMQDVER2	10956.8	6719.49	4667.22
P05942	P05942	S10A4_RAT	S100a4	Protein S100-A4	1	LMNNLDSNR	LMNNLDSNR	2	LMNNLDSNR2	124521	114510	128965
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	LMNQLAELNGSIGNYYQDVTDAQIK	LMNQLAELNGSIGNYYQDVTDAQIK	3	LMNQLAELNGSIGNYYQDVTDAQIK3		8830.75	4817.33
Q6AYB4	Q6AYB4	HSP7E_RAT	Hspa14	Heat shock 70 kDa protein 14	1	LMNSAEVAK	LMNSAEVAK	2	LMNSAEVAK2	12630.8	16089.6	
P13721	P13721	SIAT1_RAT	St6gal1	Beta-galactoside alpha-2,6-sialyltransferase 1	1	LMNSQLVTTEK	LMNSQLVTTEK	2	LMNSQLVTTEK2	2463.35		3603.52
Q5U2V1	Q5U2V1	Q5U2V1_RAT	Fkbp10	peptidylprolyl isomerase	1	LMPGQDPDK	LMPGQDPDK	2	LMPGQDPDK2	7979.43	8656.7	
Q63072	Q63072	BST1_RAT	Bst1	ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 2	1	LMPLCDVLYGK	LMPLC(UniMod:4)DVLYGK	2	LMPLC(UniMod:4)DVLYGK2	51196.7	44477.3	56438.5
Q6P777	Q6P777	MB12A_RAT	Mvb12a	Multivesicular body subunit 12A	1	LMPLGTADVVVSDVK	LMPLGTADVVVSDVK	2	LMPLGTADVVVSDVK2	38584.4	26579.6	
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	LMPPDSTTIEK	LMPPDSTTIEK	2	LMPPDSTTIEK2	402224	472069	385119
D3ZER6	D3ZER6	D3ZER6_RAT	Tnpo2	Transportin 2	1	LMPPLIQK	LMPPLIQK	2	LMPPLIQK2	181273	184255	231315
Q6MG12	Q6MG12	CF136_RAT		Uncharacterized protein C6orf136 homolog	1	LMPSHSPSTPVK	LMPSHSPSTPVK	3	LMPSHSPSTPVK3	10593.5	7656.64	12859
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	LMPTADDDMAR	LMPTADDDMAR	2	LMPTADDDMAR2	92337.3	89442.6	85485.5
Q6P6Q9	Q6P6Q9	MICU1_RAT	Micu1	Calcium uptake protein 1, mitochondrial	1	LMQAMWK	LMQAMWK	2	LMQAMWK2	18551.5	26348	25694.5
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	LMQCLPNSNDVK	LMQC(UniMod:4)LPNSNDVK	2	LMQC(UniMod:4)LPNSNDVK2	84176.9	72835.4	77359.6
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	LMQCLPNSNDVK	LMQC(UniMod:4)LPNSNDVK	3	LMQC(UniMod:4)LPNSNDVK3	381038	432086	478333
G3V7E6	G3V7E6	G3V7E6_RAT	Pcm1	Pericentriolar material 1	1	LMQDLDNNSIAVK	LMQDLDNNSIAVK	2	LMQDLDNNSIAVK2	926.108	3160.9	1977.8
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	LMQELLK	LMQELLK	2	LMQELLK2	20529.2	26268.6	15185.7
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	LMQEWFK	LMQEWFK	2	LMQEWFK2	16671.8	8898.66	
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	LMQGDEICLR	LMQGDEIC(UniMod:4)LR	2	LMQGDEIC(UniMod:4)LR2	14939.7	23219.9	14614.9
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	LMQGDQILMVNGEDVR	LMQGDQILMVNGEDVR	2	LMQGDQILMVNGEDVR2	2992.75	1423.63	
Q9Z1S7	Q9Z1S7	OMD_RAT	Omd	Osteomodulin	1	LMQLNLCNNR	LMQLNLC(UniMod:4)NNR	2	LMQLNLC(UniMod:4)NNR2	422364	392614	407625
Q9Z1S7	Q9Z1S7	OMD_RAT	Omd	Osteomodulin	1	LMQLNLCNNR	LMQLNLC(UniMod:4)NNR	3	LMQLNLC(UniMod:4)NNR3	6129.25	10915.8	5218.26
D4AEK9	D4AEK9	D4AEK9_RAT	Ccdc6	Coiled-coil domain containing 6	1	LMQLQHEK	LMQLQHEK	2	LMQLQHEK2	9606.4	13186.2	5036.64
P97711	P97711	GRK6_RAT	Grk6	G protein-coupled receptor kinase 6	1	LMQNFLSHTGPDLIPEVPR	LMQNFLSHTGPDLIPEVPR	3	LMQNFLSHTGPDLIPEVPR3	37773.8	41307.7	48007.8
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	LMQNSTSPPLK	LMQNSTSPPLK	2	LMQNSTSPPLK2	101028	81338.8	82793.3
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	LMQSSQSTSK	LMQSSQSTSK	2	LMQSSQSTSK2			9593.72
D4A3J9	D4A3J9	D4A3J9_RAT	Ccp110	Centriolar coiled-coil protein 110	1	LMQTDKLK	LMQTDKLK	2	LMQTDKLK2	34156.3	36240.2	32766.2
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	LMQVEFGR	LMQVEFGR	2	LMQVEFGR2	6699.25		
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	LMQVGEEFCGSK	LMQVGEEFC(UniMod:4)GSK	2	LMQVGEEFC(UniMod:4)GSK2	9052.66	5682.08	9011.64
Q63016	Q63016	LAT1_RAT	Slc7a5	Large neutral amino acids transporter small subunit 1	1	LMQVVPQET	LMQVVPQET	2	LMQVVPQET2	26700.2	23041.4	26371.7
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	LMRDADDLQK	LMRDADDLQK	2	LMRDADDLQK2	10751.6	9053.44	10825.8
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	LMRDADDLQK	LMRDADDLQK	3	LMRDADDLQK3	120454	131795	178960
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	LMRDADDLQKR	LMRDADDLQKR	3	LMRDADDLQKR3			13361
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	LMSALLSGLTDR	LMSALLSGLTDR	2	LMSALLSGLTDR2	22461	15184.1	18616.3
A0A8I6AIH6	A0A8I6AIH6	A0A8I6AIH6_RAT	Suclg2	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial	1	LMSEHGVR	LMSEHGVR	2	LMSEHGVR2	14548.8	33300.6	
Q62818	Q62818	EI2BB_RAT	Eif2b2	Translation initiation factor eIF-2B subunit beta	1	LMSELYHPDDHVL	LMSELYHPDDHVL	3	LMSELYHPDDHVL3	14636.5	18223	17338.2
B5DEP5	B5DEP5	B5DEP5_RAT	Trip4	Thyroid hormone receptor interactor 4	1	LMSGAENSGK	LMSGAENSGK	2	LMSGAENSGK2	27108.5	25075.5	23004.6
A0A8I6AMK1	A0A8I6AMK1	A0A8I6AMK1_RAT	Kdsr	3-dehydrosphinganine reductase	1	LMSINYLGSVYPSR	LMSINYLGSVYPSR	2	LMSINYLGSVYPSR2	2179.48		
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	LMSIVSALFPK	LMSIVSALFPK	2	LMSIVSALFPK2	46759.2	43967.4	54541.1
O08770	O08770	GPV_RAT	Gp5	Platelet glycoprotein V	1	LMSLDSGLLANLGALTELR	LMSLDSGLLANLGALTELR	3	LMSLDSGLLANLGALTELR3		193679	260789
O08770	O08770	GPV_RAT	Gp5	Platelet glycoprotein V	1	LMSLDSGLLANLGALTELRLER	LMSLDSGLLANLGALTELRLER	3	LMSLDSGLLANLGALTELRLER3	486.858	7537.79	17235.8
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	LMSLVNSTEGK	LMSLVNSTEGK	2	LMSLVNSTEGK2	31383.6	23309.7	33132.5
B0BN30	B0BN30	B0BN30_RAT	Mtch1	Mitochondrial carrier 1	1	LMSNALSTVTR	LMSNALSTVTR	2	LMSNALSTVTR2	37056.4	38999.4	30881.8
P04638	P04638	APOA2_RAT	Apoa2	Apolipoprotein A-II	1	LMSPEEK	LMSPEEK	2	LMSPEEK2	398680	310801	394704
P04638	P04638	APOA2_RAT	Apoa2	Apolipoprotein A-II	1	LMSPEEKPAPAAK	LMSPEEKPAPAAK	3	LMSPEEKPAPAAK3	9075.75	7459.05	
D3ZW15	D3ZW15	D3ZW15_RAT	Sec24b	SEC24 homolog B, COPII coat complex component	1	LMSPTGGR	LMSPTGGR	2	LMSPTGGR2	25798	29245.4	30594.7
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	LMSQGYSYQDIQK	LMSQGYSYQDIQK	2	LMSQGYSYQDIQK2	33907.5	36522.7	47398.9
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	LMSSMEER	LMSSMEER	2	LMSSMEER2	394419	414304	447821
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	LMSSNSTDLPLNIECFMNDKDVSAK	LMSSNSTDLPLNIEC(UniMod:4)FMNDKDVSAK	3	LMSSNSTDLPLNIEC(UniMod:4)FMNDKDVSAK3	49534.2	52854.8	50884.7
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	LMSSSVVVR	LMSSSVVVR	2	LMSSSVVVR2	52506.1	57810	54370.5
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	LMSVLSLCGPESGLPK	LMSVLSLC(UniMod:4)GPESGLPK	2	LMSVLSLC(UniMod:4)GPESGLPK2	11210.3	16560	17353.6
Q80Z70	Q80Z70	SE1L1_RAT	Sel1l	Protein sel-1 homolog 1	1	LMTAYNSYK	LMTAYNSYK	2	LMTAYNSYK2	10485.1	15639.8	15413.6
F1LPV0	F1LPV0	F1LPV0_RAT	Nars1	asparagine--tRNA ligase	1	LMTDTINEPILLCR	LMTDTINEPILLC(UniMod:4)R	2	LMTDTINEPILLC(UniMod:4)R2	36425.3	24260.4	29182.9
Q6AYG5	Q6AYG5	ECHD1_RAT	Echdc1	Ethylmalonyl-CoA decarboxylase	1	LMTEESVIR	LMTEESVIR	2	LMTEESVIR2	47934.1	39332.4	39755.7
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	LMTGEDGYYFTNLCCAVAFIEK	LMTGEDGYYFTNLC(UniMod:4)C(UniMod:4)AVAFIEK	3	LMTGEDGYYFTNLC(UniMod:4)C(UniMod:4)AVAFIEK3	3055.51	3483.77	
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	LMTHLDTDVK	LMTHLDTDVK	3	LMTHLDTDVK3	21282.6	12566.7	14293.1
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	LMTHLDTDVKR	LMTHLDTDVKR	3	LMTHLDTDVKR3	5922.11	8823.13	11387.2
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	LMTHVDK	LMTHVDK	2	LMTHVDK2		54730	
P63144	P63144	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	1	LMTIAYESGVNLFDTAEVYAAGK	LMTIAYESGVNLFDTAEVYAAGK	3	LMTIAYESGVNLFDTAEVYAAGK3		7049.24	
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	LMTIYLSTK	LMTIYLSTK	2	LMTIYLSTK2	40270.3	51648.1	42362.2
Q0D2L2	Q0D2L2	Q0D2L2_RAT	Mrps22	Mitochondrial ribosomal protein S22	1	LMTQAQLEEATR	LMTQAQLEEATR	2	LMTQAQLEEATR2	3515.3	5985.03	7848.45
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	LMTQDCLEHAK	LMTQDC(UniMod:4)LEHAK	2	LMTQDC(UniMod:4)LEHAK2	298192	270237	273439
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	LMTQDCLEHAK	LMTQDC(UniMod:4)LEHAK	3	LMTQDC(UniMod:4)LEHAK3	2.8451e+06	3.0563e+06	2.97797e+06
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	LMTSSTNNWVLIK	LMTSSTNNWVLIK	2	LMTSSTNNWVLIK2	32590.8	32866.7	20748.1
Q3B7D1	Q3B7D1	UBE2Z_RAT	Ube2z	Ubiquitin-conjugating enzyme E2 Z	1	LMTTGNNTVR	LMTTGNNTVR	2	LMTTGNNTVR2	195758	204842	222887
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	LMTVVAGPDPVNTTFLNFMAVQDDTVK	LMTVVAGPDPVNTTFLNFMAVQDDTVK	3	LMTVVAGPDPVNTTFLNFMAVQDDTVK3	7071.98	6245.03	9718.12
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	LMVELSK	LMVELSK	1	LMVELSK1	1290.33		
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	LMVELSK	LMVELSK	2	LMVELSK2	493013	464289	477544
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	LMVEPLQNILIR	LMVEPLQNILIR	2	LMVEPLQNILIR2	26162.3	13920.4	13916.2
A0A8I5ZQ24	A0A8I5ZQ24	A0A8I5ZQ24_RAT	Atp6v1h	V-type proton ATPase subunit H	1	LMVHNWEYLGK	LMVHNWEYLGK	3	LMVHNWEYLGK3	18839.8	16718.2	15552.3
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LMVHTVATFNSIK	LMVHTVATFNSIK	2	LMVHTVATFNSIK2	27103.7	25094.9	21360.4
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LMVHTVATFNSIK	LMVHTVATFNSIK	3	LMVHTVATFNSIK3	258945	279620	265576
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	LMVHYQPITGSDEWGSTSTEQGRPR	LMVHYQPITGSDEWGSTSTEQGRPR	3	LMVHYQPITGSDEWGSTSTEQGRPR3	7277.7	4823.85	
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	LMVHYQPITGSDEWGSTSTEQGRPR	LMVHYQPITGSDEWGSTSTEQGRPR	4	LMVHYQPITGSDEWGSTSTEQGRPR4	93059.4	107371	97507.4
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	LMVIFSK	LMVIFSK	2	LMVIFSK2	254129	280024	243886
A0A8I6GH74	A0A8I6GH74	A0A8I6GH74_RAT	Fam172a	Family with sequence similarity 172, member A	1	LMVLIHGSGVVR	LMVLIHGSGVVR	3	LMVLIHGSGVVR3	2285.46		2798.18
Q63797	Q63797	PSME1_RAT	Psme1	Proteasome activator complex subunit 1	1	LMVMEIR	LMVMEIR	2	LMVMEIR2	32712	32412.7	20208.1
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	LMVPLLK	LMVPLLK	2	LMVPLLK2	206163	210258	192229
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	LMVQGHLTK	LMVQGHLTK	2	LMVQGHLTK2	31373.4	31082.9	27272.9
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	LMVSANQSQSDALLGEVDGHPSER	LMVSANQSQSDALLGEVDGHPSER	3	LMVSANQSQSDALLGEVDGHPSER3	4896.4	4954.43	7013.14
D3Z841	D3Z841	D3Z841_RAT	Btnl10	Butyrophilin like 10	1	LMVSEDQK	LMVSEDQK	2	LMVSEDQK2	24912.8	23809.6	19415.8
D3ZUX7	D3ZUX7	D3ZUX7_RAT	Acsf3	Acyl-CoA synthetase family member 3	1	LMVSGSAALPVPLLEK	LMVSGSAALPVPLLEK	2	LMVSGSAALPVPLLEK2	5965.63		7105.28
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	LMVSHSADAPQIQQMK	LMVSHSADAPQIQQMK	3	LMVSHSADAPQIQQMK3	38388.3	27520.5	29263
A0A8I5Y9M9	A0A8I5Y9M9	A0A8I5Y9M9_RAT	Sri	Sorcin	1	LMVSMLDR	LMVSMLDR	2	LMVSMLDR2	150322	131937	129881
A0A8I5Y9M9	A0A8I5Y9M9	A0A8I5Y9M9_RAT	Sri	Sorcin	1	LMVSMLDRDMSGTMGFSEFR	LMVSMLDRDMSGTMGFSEFR	3	LMVSMLDRDMSGTMGFSEFR3	8393.8	12843.1	6771.02
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	LMVTAESVFQK	LMVTAESVFQK	2	LMVTAESVFQK2	4437.18	3234.72	1425.84
A0A8I5ZT44	A0A8I5ZT44	A0A8I5ZT44_RAT	Tlcd3a	TLC domain containing 3A	1	LMVTHHAVILFFLVPISQK	LMVTHHAVILFFLVPISQK	4	LMVTHHAVILFFLVPISQK4		17041.5	17130.1
O35254	O35254	GORS1_RAT	Gorasp1	Golgi reassembly-stacking protein 1	1	LMVYNSESDSCR	LMVYNSESDSC(UniMod:4)R	2	LMVYNSESDSC(UniMod:4)R2	28347.8	28078.7	32820.6
B2RZ68	B2RZ68	B2RZ68_RAT	Dcaf7	DDB1 and CUL4 associated factor 7	1	LMWIPDTK	LMWIPDTK	2	LMWIPDTK2	14333.7	23608.9	14036.3
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	LMWIPVYGGK	LMWIPVYGGK	2	LMWIPVYGGK2	97057.4	88651.4	96072.5
Q6PEB9	Q6PEB9	CC127_RAT	Ccdc127	Coiled-coil domain-containing protein 127	1	LMWMYLK	LMWMYLK	2	LMWMYLK2	7104.06	8715.9	8929.64
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	LMYAIGGDDYVR	LMYAIGGDDYVR	2	LMYAIGGDDYVR2	165145	140760	163910
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	LMYDNTSEITGK	LMYDNTSEITGK	2	LMYDNTSEITGK2	38482	46742.4	33105.9
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	LMYEHELEQLR	LMYEHELEQLR	3	LMYEHELEQLR3	35114.2	25179.4	39714.4
O54857	O54857	PTEN_RAT	Pten	Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN	1	LMYFEFPQPLPVCGDIK	LMYFEFPQPLPVC(UniMod:4)GDIK	3	LMYFEFPQPLPVC(UniMod:4)GDIK3	4228.34	4966.09	6693.36
Q641X7	Q641X7	FBX25_RAT	Fbxo25	F-box only protein 25	1	LMYFTLQK	LMYFTLQK	2	LMYFTLQK2		2938.64	3163.79
Q2KMM2	Q2KMM2	TPPC1_RAT	Trappc1	Trafficking protein particle complex subunit 1	1	LMYGMLFSIR	LMYGMLFSIR	2	LMYGMLFSIR2	24109	16769.2	11338.8
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LNADIEGLASSVDVTTSYSSDPLHFNNVFR	LNADIEGLASSVDVTTSYSSDPLHFNNVFR	4	LNADIEGLASSVDVTTSYSSDPLHFNNVFR4	22893.2	25922.1	17250.7
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	LNADVLK	LNADVLK	2	LNADVLK2	63717	71497.3	84196.6
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	LNAEDIK	LNAEDIK	2	LNAEDIK2		8048.96	4837.79
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	LNAEDIKR	LNAEDIKR	2	LNAEDIKR2	7304.15	6968.22	6271.67
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	LNAFCVTVCDEK	LNAFC(UniMod:4)VTVC(UniMod:4)DEK	2	LNAFC(UniMod:4)VTVC(UniMod:4)DEK2	2722.53	1891.88	3465.84
Q8R491	Q8R491;Q641Z6	EHD3_RAT	Ehd3	EH domain-containing protein 3	0	LNAFGNAFLNR	LNAFGNAFLNR	2	LNAFGNAFLNR2	220501	194075	194088
Q8R491	Q8R491;Q641Z6	EHD3_RAT	Ehd3	EH domain-containing protein 3	0	LNAFGNAFLNR	LNAFGNAFLNR	3	LNAFGNAFLNR3	4098.13	6681.41	5714.52
D3Z9K9	D3Z9K9	D3Z9K9_RAT	Gdpd2	Glycerophosphodiester phosphodiesterase domain containing 2	1	LNAGTWFLER	LNAGTWFLER	2	LNAGTWFLER2	142738	171926	354586
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	LNAILFK	LNAILFK	1	LNAILFK1	1570.92		
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	LNAILFK	LNAILFK	2	LNAILFK2	144193	183793	161803
A0A8I5ZZR5	A0A8I5ZZR5	A0A8I5ZZR5_RAT	Nbeal1	Neurobeachin-like 1	1	LNALLQTK	LNALLQTK	2	LNALLQTK2	4623.15	3474.24	5661.61
Q80WD1	Q80WD1	R4RL2_RAT	Rtn4rl2	Reticulon-4 receptor-like 2	1	LNANPWACDCR	LNANPWAC(UniMod:4)DC(UniMod:4)R	2	LNANPWAC(UniMod:4)DC(UniMod:4)R2	23251.4	12282.3	6569.93
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	LNANVMHGK	LNANVMHGK	2	LNANVMHGK2	5686.39	7028.14	6343.31
D3ZU48	D3ZU48	D3ZU48_RAT	Klhdc4	Kelch domain containing 4	1	LNASLSAHPEK	LNASLSAHPEK	2	LNASLSAHPEK2	4827.04	3085.68	4865.17
D3ZU48	D3ZU48	D3ZU48_RAT	Klhdc4	Kelch domain containing 4	1	LNASLSAHPEK	LNASLSAHPEK	3	LNASLSAHPEK3	21640.7	19586.4	34349.9
A0A8I6ANB2	A0A8I6ANB2	A0A8I6ANB2_RAT	Ppfibp1	PPFIA binding protein 1	1	LNATEEMLQQELLSR	LNATEEMLQQELLSR	2	LNATEEMLQQELLSR2	986.711	2555.99	1465.9
P34064	P34064	PSA5_RAT	Psma5	Proteasome subunit alpha type-5	1	LNATNIELATVQPGQNFHMFTK	LNATNIELATVQPGQNFHMFTK	3	LNATNIELATVQPGQNFHMFTK3	2.24283e+06	2.29558e+06	2.46389e+06
P34064	P34064	PSA5_RAT	Psma5	Proteasome subunit alpha type-5	1	LNATNIELATVQPGQNFHMFTK	LNATNIELATVQPGQNFHMFTK	4	LNATNIELATVQPGQNFHMFTK4	22579.8	30814.2	25404.6
D4A0J7	D4A0J7	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	1	LNAVDLSTQK	LNAVDLSTQK	2	LNAVDLSTQK2	35670	27023.2	28017.6
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	LNAVVNDFWAEISESVDK	LNAVVNDFWAEISESVDK	3	LNAVVNDFWAEISESVDK3	16207.6	10908.6	12397.4
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	LNAYTGVVSLQR	LNAYTGVVSLQR	2	LNAYTGVVSLQR2	150048	142384	132626
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	LNAYTGVVSLQR	LNAYTGVVSLQR	3	LNAYTGVVSLQR3	20984.7	24832.5	19586.2
B1WBZ6	B1WBZ6	B1WBZ6_RAT	RGD1565685	RGD1565685 protein	1	LNCAEYK	LNC(UniMod:4)AEYK	2	LNC(UniMod:4)AEYK2	18038.3	14251.5	21821.3
O35568	O35568	FBLN3_RAT	Efemp1	EGF-containing fibulin-like extracellular matrix protein 1	1	LNCEDIDECR	LNC(UniMod:4)EDIDEC(UniMod:4)R	2	LNC(UniMod:4)EDIDEC(UniMod:4)R2	21617	16729.5	17090.3
D3ZZA8	D3ZZA8	D3ZZA8_RAT	Sec24a	SEC24 homolog A, COPII coat complex component	1	LNCNPELFR	LNC(UniMod:4)NPELFR	2	LNC(UniMod:4)NPELFR2	9901.62	4506.11	
Q63716	Q63716;A0A0G2K3Z9	PRDX1_RAT	Prdx1	Peroxiredoxin-1	0	LNCQVIGASVDSHFCHLAWINTPK	LNC(UniMod:4)QVIGASVDSHFC(UniMod:4)HLAWINTPK	3	LNC(UniMod:4)QVIGASVDSHFC(UniMod:4)HLAWINTPK3	11343.9	16245.4	13497.1
Q63716	Q63716;A0A0G2K3Z9	PRDX1_RAT	Prdx1	Peroxiredoxin-1	0	LNCQVIGASVDSHFCHLAWINTPK	LNC(UniMod:4)QVIGASVDSHFC(UniMod:4)HLAWINTPK	4	LNC(UniMod:4)QVIGASVDSHFC(UniMod:4)HLAWINTPK4	39241.9	41176.1	40907.8
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	LNCTGSHLAECQATLLR	LNC(UniMod:4)TGSHLAEC(UniMod:4)QATLLR	2	LNC(UniMod:4)TGSHLAEC(UniMod:4)QATLLR2	1242.38	5586	3590.57
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	LNCTGSHLAECQATLLR	LNC(UniMod:4)TGSHLAEC(UniMod:4)QATLLR	3	LNC(UniMod:4)TGSHLAEC(UniMod:4)QATLLR3	99669	115446	73423.9
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	LNCTGSHLAECQATLLRK	LNC(UniMod:4)TGSHLAEC(UniMod:4)QATLLRK	4	LNC(UniMod:4)TGSHLAEC(UniMod:4)QATLLRK4	1232.23		2164.9
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LNDALDRLEELK	LNDALDRLEELK	3	LNDALDRLEELK3	35285.4	39430.6	36962.9
P11240	P11240;A0A8I6A0L0	COX5A_RAT	Cox5a	Cytochrome c oxidase subunit 5A, mitochondrial	0	LNDFASAVR	LNDFASAVR	2	LNDFASAVR2	445967	438632	402697
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LNDFSGIK	LNDFSGIK	1	LNDFSGIK1	6810.85	8322.24	8594.64
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LNDFSGIK	LNDFSGIK	2	LNDFSGIK2	630240	705097	700093
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	LNDFVMPVCLPEHPSTEGTMVIVSGWGK	LNDFVMPVC(UniMod:4)LPEHPSTEGTMVIVSGWGK	4	LNDFVMPVC(UniMod:4)LPEHPSTEGTMVIVSGWGK4	165220	190748	125980
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	LNDGSQITFEK	LNDGSQITFEK	2	LNDGSQITFEK2	63942.8	67234.7	63342.5
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	LNDHFPLVVWQTGSGTQTNMNVNEVISNR	LNDHFPLVVWQTGSGTQTNMNVNEVISNR	4	LNDHFPLVVWQTGSGTQTNMNVNEVISNR4		2960.29	2105.09
P51111	P51111	HD_RAT	Htt	Huntingtin	1	LNDLFGDTTSYQSLTTLAR	LNDLFGDTTSYQSLTTLAR	3	LNDLFGDTTSYQSLTTLAR3	6788.84	5778.95	6311.64
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	LNDLIQR	LNDLIQR	2	LNDLIQR2	201995	190678	163773
A0A8I5ZVI9	A0A8I5ZVI9	A0A8I5ZVI9_RAT	Ranbp3	RAN binding protein 3	1	LNDMASADDGTLQSR	LNDMASADDGTLQSR	2	LNDMASADDGTLQSR2	28461.8	20803.9	22419.2
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	LNDMEPSK	LNDMEPSK	1	LNDMEPSK1	8336.01	6165.33	9118.1
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	LNDMEPSK	LNDMEPSK	2	LNDMEPSK2	134733	128795	144435
P53987	P53987	MOT1_RAT	Slc16a1	Monocarboxylate transporter 1	1	LNDMYGDYK	LNDMYGDYK	2	LNDMYGDYK2	6578.7	9269.14	11553.7
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	LNDPFQPFPGNDSPK	LNDPFQPFPGNDSPK	2	LNDPFQPFPGNDSPK2	108999	119512	102431
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	LNDSILQATEQR	LNDSILQATEQR	2	LNDSILQATEQR2	10198.6	9856.7	
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	LNDVTDVQILAR	LNDVTDVQILAR	2	LNDVTDVQILAR2	184204	182995	175109
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	LNDVTDVQILAR	LNDVTDVQILAR	3	LNDVTDVQILAR3	3310.81		3251.38
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	LNDYVFSFDK	LNDYVFSFDK	2	LNDYVFSFDK2	28370.6	33763.4	31634.1
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	LNEAAAGLNQAATELVQASR	LNEAAAGLNQAATELVQASR	3	LNEAAAGLNQAATELVQASR3	658099	611776	652270
Q3KRD8	A0A8I6AC66;Q3KRD8	IF6_RAT	Eif6	Eukaryotic translation initiation factor 6	0	LNEAKPSTIATSMR	LNEAKPSTIATSMR	3	LNEAKPSTIATSMR3	17851.4	14162.2	15993.9
Q769K2	Q769K2	NAPEP_RAT	Napepld	N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D	1	LNEALER	LNEALER	2	LNEALER2	78805.8	96742.3	67791.3
P0C548	P0C548	PLPL2_RAT	Pnpla2	Patatin-like phospholipase domain-containing protein 2	1	LNEALLEACVEPK	LNEALLEAC(UniMod:4)VEPK	2	LNEALLEAC(UniMod:4)VEPK2		7211.01	
A0A8I5ZVI9	A0A8I5ZVI9	A0A8I5ZVI9_RAT	Ranbp3	RAN binding protein 3	1	LNEANSDTSR	LNEANSDTSR	2	LNEANSDTSR2			10962.4
P21670	P21670	PSA4_RAT	Psma4	Proteasome subunit alpha type-4	1	LNEDMACSVAGITSDANVLTNELR	LNEDMAC(UniMod:4)SVAGITSDANVLTNELR	3	LNEDMAC(UniMod:4)SVAGITSDANVLTNELR3	97037.3	76855.1	78740.9
Q7TT49	D3ZGL1;Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	0	LNEELER	LNEELER	2	LNEELER2		66052	54037.4
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	LNEETIR	LNEETIR	2	LNEETIR2	19920.4	14715.8	13221.1
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	LNEHFLNTTDFLDTIK	LNEHFLNTTDFLDTIK	2	LNEHFLNTTDFLDTIK2	24975.1	22982	20391.4
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	LNEHFLNTTDFLDTIK	LNEHFLNTTDFLDTIK	3	LNEHFLNTTDFLDTIK3	223805	191416	233652
Q05701	Q05701	BPIB3_RAT	Bpifb3	BPI fold-containing family B member 3	1	LNEHLEVGIPLPK	LNEHLEVGIPLPK	3	LNEHLEVGIPLPK3	5915.5	8819.87	9470.68
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	LNEIEAAMR	LNEIEAAMR	2	LNEIEAAMR2	16391.2	10067	17780.3
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	LNEIEGSLNK	LNEIEGSLNK	2	LNEIEGSLNK2	253477	280159	264006
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	LNEILFPFYDAK	LNEILFPFYDAK	2	LNEILFPFYDAK2	38698.1	38461.1	27983.9
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	LNEILQVR	LNEILQVR	2	LNEILQVR2	94785.5	88372.5	94907.6
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	LNEIVDAANAVISHIDQTALAVYIAMK	LNEIVDAANAVISHIDQTALAVYIAMK	3	LNEIVDAANAVISHIDQTALAVYIAMK3		6443.9	4791.05
Q99ND9	Q99ND9	RWDD1_RAT	Rwdd1	RWD domain-containing protein 1	1	LNEIVDQIK	LNEIVDQIK	2	LNEIVDQIK2	14950.6	14510.2	12103.4
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	LNELESDLTFK	LNELESDLTFK	2	LNELESDLTFK2	246118		183457
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	LNELLEAIK	LNELLEAIK	2	LNELLEAIK2	66722.5	66697.8	50377.2
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	LNEMTPLISQACELLLSHLK	LNEMTPLISQAC(UniMod:4)ELLLSHLK	3	LNEMTPLISQAC(UniMod:4)ELLLSHLK3	32009.1	24185	25116.2
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	LNENHSGELWK	LNENHSGELWK	2	LNENHSGELWK2	38833.2	34666.8	41127.3
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	LNENHSGELWK	LNENHSGELWK	3	LNENHSGELWK3	964994	965178	1.03186e+06
Q63945	Q63945;Q6QI56	SET_RAT	Set	Protein SET	0	LNEQASEEILK	LNEQASEEILK	2	LNEQASEEILK2	5862.99		
A0A8I6AHW7	A0A8I6AHW7	A0A8I6AHW7_RAT	Smap1	Small ArfGAP 1	1	LNEQHQLILSK	LNEQHQLILSK	2	LNEQHQLILSK2	2260.24	3325.52	
A0A8I6AHW7	A0A8I6AHW7	A0A8I6AHW7_RAT	Smap1	Small ArfGAP 1	1	LNEQHQLILSK	LNEQHQLILSK	3	LNEQHQLILSK3	40630.8	36341	41570
Q4KM74	Q4KM74	SC22B_RAT	Sec22b	Vesicle-trafficking protein SEC22b	1	LNEQSPTR	LNEQSPTR	2	LNEQSPTR2	55757.7		58263.1
Q5M9G3	Q5M9G3	CAPR1_RAT	Caprin1	Caprin-1	1	LNEQYEHASIHLWDLLEGK	LNEQYEHASIHLWDLLEGK	4	LNEQYEHASIHLWDLLEGK4	11465.8	10211.3	13662.7
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	LNEREVVK	LNEREVVK	2	LNEREVVK2	28547.6	35643.1	34956.1
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	LNETDHNGDLALDLALSR	LNETDHNGDLALDLALSR	3	LNETDHNGDLALDLALSR3	11624.4	12566.7	10526.2
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	LNETLSSFSDDNK	LNETLSSFSDDNK	2	LNETLSSFSDDNK2	26712.2	31438.5	24542.8
A0A8I5ZXB9	A0A8I5ZXB9	A0A8I5ZXB9_RAT	Kifap3	Kinesin-associated protein 3	1	LNEVEQLLYYLQNR	LNEVEQLLYYLQNR	3	LNEVEQLLYYLQNR3	3744.65	10910.8	4457.25
G3V6N7	Q63633;G3V6N7	G3V6N7_RAT	Slc12a6	Solute carrier family 12, member 6	0	LNEVIVNK	LNEVIVNK	2	LNEVIVNK2	21346.2	21634.8	9853.68
Q63632	Q63632	S12A4_RAT	Slc12a4	Solute carrier family 12 member 4	1	LNEVIVTR	LNEVIVTR	2	LNEVIVTR2	6880.2	8678.69	5096.71
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	LNEVLYPPLR	LNEVLYPPLR	2	LNEVLYPPLR2	69398	95552.5	74310.7
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	LNFAVASR	LNFAVASR	2	LNFAVASR2	502173	493856	594194
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	LNFFIHNLAQMK	LNFFIHNLAQMK	3	LNFFIHNLAQMK3	9786.62	2196.59	
D4A4T0	D4A4T0	D4A4T0_RAT	Stub1	STIP1 homology and U-box containing protein 1	1	LNFGDDIPSALR	LNFGDDIPSALR	2	LNFGDDIPSALR2	31092.2	41214.6	36329.1
Q5M9G9	Q5M9G9	FAKD4_RAT	Tbrg4	FAST kinase domain-containing protein 4	1	LNFHPEQEDQFFNLVHEK	LNFHPEQEDQFFNLVHEK	4	LNFHPEQEDQFFNLVHEK4	1096.95		1597.38
A0A8I6AEI1	A0A8I6AEI1	A0A8I6AEI1_RAT	Hps1	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1	1	LNFLATAPSR	LNFLATAPSR	2	LNFLATAPSR2	71796.3	80095.6	88767.1
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	LNFLSPELPAVAEFSTNETMGHSADR	LNFLSPELPAVAEFSTNETMGHSADR	3	LNFLSPELPAVAEFSTNETMGHSADR3	178007	155923	181986
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	LNFNGETLDSTDPSNLSLMSYAAR	LNFNGETLDSTDPSNLSLMSYAAR	3	LNFNGETLDSTDPSNLSLMSYAAR3	12852.3	13374.2	9649.78
D3ZEJ2	D3ZEJ2	D3ZEJ2_RAT	Mcur1	Mitochondrial calcium uniporter regulator 1	1	LNFNLEK	LNFNLEK	2	LNFNLEK2	22480.7	26055.6	27317
P27139	P27139	CAH2_RAT	Ca2	Carbonic anhydrase 2	1	LNFNSEGEAEELMVDNWRPAQPLK	LNFNSEGEAEELMVDNWRPAQPLK	3	LNFNSEGEAEELMVDNWRPAQPLK3	13607.7	6892.18	12687.3
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	LNFQVELLLDK	LNFQVELLLDK	2	LNFQVELLLDK2	9882.79	10885.7	9780.93
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	LNFQVELLLDKLK	LNFQVELLLDKLK	3	LNFQVELLLDKLK3	2583.59	3815.59	
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	LNFSDQPDLAQWTR	LNFSDQPDLAQWTR	2	LNFSDQPDLAQWTR2	4408.17		4307.87
P11980	A0A8I6AKN1;M0RD14;A0A8I6A7K2;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	LNFSHGTHEYHAETIK	LNFSHGTHEYHAETIK	2	LNFSHGTHEYHAETIK2	5213.3	3241.21	
P11980	A0A8I6AKN1;M0RD14;A0A8I6A7K2;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	LNFSHGTHEYHAETIK	LNFSHGTHEYHAETIK	3	LNFSHGTHEYHAETIK3	229553	79104.3	41626.8
P11980	A0A8I6AKN1;M0RD14;A0A8I6A7K2;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	LNFSHGTHEYHAETIK	LNFSHGTHEYHAETIK	4	LNFSHGTHEYHAETIK4	416303	215738	175120
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	LNFVPLER	LNFVPLER	2	LNFVPLER2	50996.2	38212.9	34506.3
Q9Z1Y3	Q9Z1Y3	CADH2_RAT	Cdh2	Cadherin-2	1	LNGDFAQLNLK	LNGDFAQLNLK	2	LNGDFAQLNLK2	9104.16	9378.29	7340.6
Q78E14	M0R8N5;Q78E14	Q78E14_RAT	Obp3	Alpha-2u globulin PGCL4	0	LNGDWFSIVVASDK	LNGDWFSIVVASDK	2	LNGDWFSIVVASDK2	4685.57		3000.8
P02761	P02761	MUP_RAT		Major urinary protein	1	LNGDWFSIVVASNK	LNGDWFSIVVASNK	2	LNGDWFSIVVASNK2	28248.5	29736	30490.7
P02761	P02761	MUP_RAT		Major urinary protein	1	LNGDWFSIVVASNKR	LNGDWFSIVVASNKR	3	LNGDWFSIVVASNKR3	17192.4	16049.2	14771.7
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	LNGELLLK	LNGELLLK	2	LNGELLLK2	7050.53		6297.24
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	LNGFEVFAR	LNGFEVFAR	2	LNGFEVFAR2	166232	151136	166602
A0A0G2K542	A0A0G2K542	A0A0G2K542_RAT	Ugp2	UTP--glucose-1-phosphate uridylyltransferase	1	LNGGLGTSMGCK	LNGGLGTSMGC(UniMod:4)K	2	LNGGLGTSMGC(UniMod:4)K2	7569.8	3027.51	3731.52
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	LNGHVVVK	LNGHVVVK	2	LNGHVVVK2	40106	27967.1	18006
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	LNGLYPFR	LNGLYPFR	2	LNGLYPFR2	20603.9	8111.26	12185.6
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	LNGPQDHNHLLYSTIPR	LNGPQDHNHLLYSTIPR	3	LNGPQDHNHLLYSTIPR3	2464.63	1178.62	
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	LNGPQDHNHLLYSTIPR	LNGPQDHNHLLYSTIPR	4	LNGPQDHNHLLYSTIPR4	5408.25	7569.51	7341.66
Q10473	Q10473	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	1	LNGPVTMLK	LNGPVTMLK	2	LNGPVTMLK2	60753.6	52783.6	60598.4
P13832	P13832;Q64122;P18666	MRLCA_RAT	Rlc-a	Myosin regulatory light chain RLC-A	0	LNGTDPEDVIR	LNGTDPEDVIR	2	LNGTDPEDVIR2	3.23393e+06	3.34608e+06	3.79407e+06
P51792	P51792	CLCN3_RAT	Clcn3	H(+)/Cl(-) exchange transporter 3	1	LNGYPFLDAK	LNGYPFLDAK	2	LNGYPFLDAK2	33296.2	20648	29135.1
Q8CG09	A0A0G2K5H6;Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	0	LNHECAEGGENLSVGQR	LNHEC(UniMod:4)AEGGENLSVGQR	3	LNHEC(UniMod:4)AEGGENLSVGQR3	15653.8	11979.9	7865.52
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	LNHFFEGVEAR	LNHFFEGVEAR	3	LNHFFEGVEAR3	32526.9	43924.1	
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	LNHLSFAELLKPFSR	LNHLSFAELLKPFSR	3	LNHLSFAELLKPFSR3	9911.5		9578.62
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	LNHLSFAELLKPFSR	LNHLSFAELLKPFSR	4	LNHLSFAELLKPFSR4	16464	17145	23049.8
Q07803	Q07803	EFGM_RAT	Gfm1	Elongation factor G, mitochondrial	1	LNHNAAFVQIPIGLEGDFK	LNHNAAFVQIPIGLEGDFK	3	LNHNAAFVQIPIGLEGDFK3	7907.36	4702.52	11680.4
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LNHQEFK	LNHQEFK	1	LNHQEFK1	17577.5	21647.4	16533.1
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LNHQEFK	LNHQEFK	2	LNHQEFK2	155320	121095	126507
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LNHQGELMLK	LNHQGELMLK	2	LNHQGELMLK2	5288.91	2182.14	1752.02
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LNHQGELMLK	LNHQGELMLK	3	LNHQGELMLK3	45645.2	51127.8	54893.1
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	LNHQMEGLAFQMK	LNHQMEGLAFQMK	2	LNHQMEGLAFQMK2	1.74729e+06	1.72435e+06	1.79356e+06
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	LNHQMEGLAFQMK	LNHQMEGLAFQMK	3	LNHQMEGLAFQMK3	171537	223420	180377
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	LNHQMEGLAFQMKK	LNHQMEGLAFQMKK	3	LNHQMEGLAFQMKK3	7781.84	8262.62	5602.2
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	LNHQMEGLAFQMKK	LNHQMEGLAFQMKK	4	LNHQMEGLAFQMKK4	10613.4	6804.18	14516.6
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	LNHSLYEVMSK	LNHSLYEVMSK	2	LNHSLYEVMSK2	874005	11314.6	11223.3
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	LNHSLYEVMSK	LNHSLYEVMSK	3	LNHSLYEVMSK3	85538.5	56886.1	53390.3
A0A8I5YC26	A0A8I5YC26	A0A8I5YC26_RAT	Mcee	Methylmalonyl CoA epimerase	1	LNHVAIAVPDLEK	LNHVAIAVPDLEK	3	LNHVAIAVPDLEK3	30280.3	26089.3	24710.2
Q68FT1	Q68FT1	COQ9_RAT	Coq9	Ubiquinone biosynthesis protein COQ9, mitochondrial	1	LNHVLEEEQK	LNHVLEEEQK	3	LNHVLEEEQK3		3351.71	5298.13
P97523	P97523	MET_RAT	Met	Hepatocyte growth factor receptor	1	LNHVLLTSISTFIK	LNHVLLTSISTFIK	3	LNHVLLTSISTFIK3	3216.86	3279.73	
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	LNHYVLYK	LNHYVLYK	2	LNHYVLYK2	20767.3	10462.9	11132.8
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	LNIDPSTITWQR	LNIDPSTITWQR	2	LNIDPSTITWQR2	30957.9	23885.3	23958.3
P63088	P63088	PP1G_RAT	Ppp1cc	Serine/threonine-protein phosphatase PP1-gamma catalytic subunit	1	LNIDSIIQR	LNIDSIIQR	2	LNIDSIIQR2	42199.8	38362.3	32215.5
F7FHP0	F7FHP0	F7FHP0_RAT	Angptl3	Angiopoietin-like 3	1	LNIFDQCFYDLSLQTNEIKEEEKELR	LNIFDQC(UniMod:4)FYDLSLQTNEIKEEEKELR	4	LNIFDQC(UniMod:4)FYDLSLQTNEIKEEEKELR4	17198.2	21422	7507.46
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	LNIGDLQATK	LNIGDLQATK	2	LNIGDLQATK2	102650	107977	110152
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	LNIGYIK	LNIGYIK	2	LNIGYIK2	141114	135559	147323
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	LNIIIIAEGAIDR	LNIIIIAEGAIDR	2	LNIIIIAEGAIDR2	13499	7165.81	6040.56
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	LNIIIIAEGAIDR	LNIIIIAEGAIDR	3	LNIIIIAEGAIDR3	3545.25		
P47858	P47858	PFKAM_RAT	Pfkm	ATP-dependent 6-phosphofructokinase, muscle type	1	LNIIIVAEGAIDK	LNIIIVAEGAIDK	2	LNIIIVAEGAIDK2	13016.6	9561.27	6433.62
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	LNIIIVSEGAIDTQNKPITSEK	LNIIIVSEGAIDTQNKPITSEK	3	LNIIIVSEGAIDTQNKPITSEK3	50289.5	31659.5	38015.1
Q4QQT4	Q4QQT4;Q5XI34	2AAB_RAT	Ppp2r1b	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	0	LNIISNLDCVNEVIGIR	LNIISNLDC(UniMod:4)VNEVIGIR	2	LNIISNLDC(UniMod:4)VNEVIGIR2	49789.6	225492	80828.9
Q4QQT4	Q4QQT4;Q5XI34	2AAB_RAT	Ppp2r1b	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	0	LNIISNLDCVNEVIGIR	LNIISNLDC(UniMod:4)VNEVIGIR	3	LNIISNLDC(UniMod:4)VNEVIGIR3	11768.8	8173.81	9805.38
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	LNILDTLSK	LNILDTLSK	2	LNILDTLSK2	185987	181492	202198
D3ZUQ1	D3ZUQ1	D3ZUQ1_RAT	Lipo1	Lipase	1	LNILIAPVR	LNILIAPVR	2	LNILIAPVR2	593579	587607	550464
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	LNILNAK	LNILNAK	1	LNILNAK1	392094	341472	271516
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	LNILNAK	LNILNAK	2	LNILNAK2	3.02177e+07	2.74986e+07	2.62077e+07
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	LNILNAKFAFNLYRVLK	LNILNAKFAFNLYRVLK	4	LNILNAKFAFNLYRVLK4	4446.08		2588.86
Q566C8	Q566C8	ANR54_RAT	Ankrd54	Ankyrin repeat domain-containing protein 54	1	LNILQEGHSQCLEAVR	LNILQEGHSQC(UniMod:4)LEAVR	3	LNILQEGHSQC(UniMod:4)LEAVR3	10438.4	9957.39	11396.8
P04762	P04762	CATA_RAT	Cat	Catalase	1	LNIMTAGPR	LNIMTAGPR	2	LNIMTAGPR2	34684.3	32110.6	25458.5
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	LNIPVNQVNPR	LNIPVNQVNPR	2	LNIPVNQVNPR2	279476	293438	297658
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	LNIPVNQVNPR	LNIPVNQVNPR	3	LNIPVNQVNPR3	9112.8	8177.46	
B2RYJ4	B2RYJ4	ADPPT_RAT	Aasdhppt	L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	1	LNIPWDHIR	LNIPWDHIR	3	LNIPWDHIR3	7756.08	1890.34	
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	LNIQPSETDYAVDIR	LNIQPSETDYAVDIR	2	LNIQPSETDYAVDIR2	332777	326344	330801
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	LNIQPSETDYAVDIR	LNIQPSETDYAVDIR	3	LNIQPSETDYAVDIR3	14680.3	17908.6	14066.4
P62755	P62755	RS6_RAT	Rps6	Small ribosomal subunit protein eS6	1	LNISFPATGCQK	LNISFPATGC(UniMod:4)QK	2	LNISFPATGC(UniMod:4)QK2	49812.8	50422.7	53035.6
Q5I0C3	Q5I0C3	MCCA_RAT	Mccc1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	1	LNISYTR	LNISYTR	2	LNISYTR2	5000.08	5361.57	5734.64
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	LNITEEQQAVLNR	LNITEEQQAVLNR	2	LNITEEQQAVLNR2	31214.5	30203.4	19281.3
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	LNITEEQQAVLNR	LNITEEQQAVLNR	3	LNITEEQQAVLNR3	24477.4	12687.9	20606.2
Q9ES53	Q9ES53	UFD1_RAT	Ufd1	Ubiquitin recognition factor in ER-associated degradation protein 1	1	LNITYPMLFK	LNITYPMLFK	2	LNITYPMLFK2	14367.6	13386.7	12700.1
A0A8I6AT08	A0A8I6AT08	A0A8I6AT08_RAT	Plac9	Placenta associated 9	1	LNIVEETVEK	LNIVEETVEK	2	LNIVEETVEK2	27653.2	42896	39363.1
O08697	O08697	ARL2_RAT	Arl2	ADP-ribosylation factor-like protein 2	1	LNIWDVGGQK	LNIWDVGGQK	2	LNIWDVGGQK2	61793.5	42450.6	57870.6
Q9R064	Q9R064	GORS2_RAT	Gorasp2	Golgi reassembly-stacking protein 2	1	LNKDNDTLKDLLK	LNKDNDTLKDLLK	3	LNKDNDTLKDLLK3	10078.1	7657.2	3562.51
Q9R064	Q9R064	GORS2_RAT	Gorasp2	Golgi reassembly-stacking protein 2	1	LNKDNDTLKDLLK	LNKDNDTLKDLLK	4	LNKDNDTLKDLLK4	4714.45	6729.85	9500.23
P35565	P35565	CALX_RAT	Canx	Calnexin	1	LNKPFLFDTK	LNKPFLFDTK	2	LNKPFLFDTK2	20042.7	8580.29	10327.5
P35565	P35565	CALX_RAT	Canx	Calnexin	1	LNKPFLFDTK	LNKPFLFDTK	3	LNKPFLFDTK3	55831.1	43955	53823.9
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	LNKPGVYTR	LNKPGVYTR	2	LNKPGVYTR2	81031.7	61131	62572.1
A0A8I5ZYB9	A0A8I5ZYB9	A0A8I5ZYB9_RAT	Lrrc32	Leucine rich repeat containing 32	1	LNLAENR	LNLAENR	2	LNLAENR2	171240	160949	174462
Q63598	Q63598	PLST_RAT	Pls3	Plastin-3	1	LNLAFVANLFNK	LNLAFVANLFNK	2	LNLAFVANLFNK2	957.273	2983.15	2747.83
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	LNLALQR	LNLALQR	2	LNLALQR2	313861	319243	306499
A0A0G2K1A2	A0A0G2K1A2	A0A0G2K1A2_RAT	Mpo	Myeloperoxidase	1	LNLASWK	LNLASWK	2	LNLASWK2	43312.5	19470.6	20103.8
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	LNLCVDK	LNLC(UniMod:4)VDK	2	LNLC(UniMod:4)VDK2	13442.4	12260.2	11298.2
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	LNLDGSNYTLLK	LNLDGSNYTLLK	2	LNLDGSNYTLLK2	13994.4	8997.59	6649.48
P62138	P62138	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	1	LNLDSIIGR	LNLDSIIGR	2	LNLDSIIGR2	244710	217801	231655
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	LNLEHIATSSAVSK	LNLEHIATSSAVSK	2	LNLEHIATSSAVSK2	7298.35	6197	
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	LNLEHIATSSAVSK	LNLEHIATSSAVSK	3	LNLEHIATSSAVSK3	58717.8	64625.2	64527.2
Q63433	Q63433	PKN1_RAT	Pkn1	Serine/threonine-protein kinase N1	1	LNLGADSDSSSQK	LNLGADSDSSSQK	2	LNLGADSDSSSQK2	16440.1	10592.4	16932.5
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	LNLGTVGFYR	LNLGTVGFYR	2	LNLGTVGFYR2	29717.5	16678.5	16781.3
Q5M7T4	Q5M7T4	YIPF4_RAT	Yipf4	Protein YIPF4	1	LNLGVSGDFIK	LNLGVSGDFIK	2	LNLGVSGDFIK2	67855.3	55875.6	64337.6
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	LNLHYAVVSK	LNLHYAVVSK	3	LNLHYAVVSK3	20363.2	19293.8	25546.6
D4A1B6	D4A1B6	D4A1B6_RAT	Abhd13	Abhydrolase domain containing 13	1	LNLILVR	LNLILVR	2	LNLILVR2	5284.18	6686.05	5189.07
B5DF93	B5DF93	PATL1_RAT	Patl1	Protein PAT1 homolog 1	1	LNLLETK	LNLLETK	2	LNLLETK2	19654.4	29789.8	16848.2
Q1AAU6	Q1AAU6;A0A8I5ZRL8	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	0	LNLLTCQVK	LNLLTC(UniMod:4)QVK	2	LNLLTC(UniMod:4)QVK2	72384.7	65284.8	59856.6
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	LNLLTCQVKPNAEDK	LNLLTC(UniMod:4)QVKPNAEDK	3	LNLLTC(UniMod:4)QVKPNAEDK3	88437.7	87354.1	92613.3
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	LNLLTCQVKPNAEDKK	LNLLTC(UniMod:4)QVKPNAEDKK	4	LNLLTC(UniMod:4)QVKPNAEDKK4	23514.7	42224.4	27663.2
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	LNLNNTVLSK	LNLNNTVLSK	2	LNLNNTVLSK2	33872.9	31707.3	35397.4
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	LNLPINIIGLAPLCENMPSGK	LNLPINIIGLAPLC(UniMod:4)ENMPSGK	3	LNLPINIIGLAPLC(UniMod:4)ENMPSGK3	10190.3	12058.1	8236.17
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	LNLQSPGTPR	LNLQSPGTPR	2	LNLQSPGTPR2	82394.8	82251.1	85894.1
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	LNLSESK	LNLSESK	2	LNLSESK2	22025.5	24764.6	20462.1
A0A0G2K6C7	A0A0G2K6C7	A0A0G2K6C7_RAT	Trim5	Tripartite motif-containing 5	1	LNLSNDSHSR	LNLSNDSHSR	2	LNLSNDSHSR2	7515.17	5437.76	2439.75
A0A0G2K6C7	A0A0G2K6C7	A0A0G2K6C7_RAT	Trim5	Tripartite motif-containing 5	1	LNLSNDSHSR	LNLSNDSHSR	3	LNLSNDSHSR3	16253.2	21787.1	27117.8
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	LNLSTLHDAQGNPLLLDCK	LNLSTLHDAQGNPLLLDC(UniMod:4)K	3	LNLSTLHDAQGNPLLLDC(UniMod:4)K3	81346.3	88063.6	90450.7
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	LNLTAAQLSQLEGLLQAR	LNLTAAQLSQLEGLLQAR	3	LNLTAAQLSQLEGLLQAR3	1111.56	1461.5	2618.68
D4ABM5	D4ABM5	D4ABM5_RAT	Mrps34	Mitochondrial ribosomal protein S34	1	LNLVPYPPLLR	LNLVPYPPLLR	2	LNLVPYPPLLR2	23309.7	23120.9	18934.5
B2GV38	B2GV38	UBL4A_RAT	Ubl4a	Ubiquitin-like protein 4A	1	LNLVVKPLEK	LNLVVKPLEK	2	LNLVVKPLEK2	18015.6	27812.8	11324.9
B2GV38	B2GV38	UBL4A_RAT	Ubl4a	Ubiquitin-like protein 4A	1	LNLVVKPLEK	LNLVVKPLEK	3	LNLVVKPLEK3	105694	119269	124009
P40112	A0A8I5ZRG0;P40112;A0A8I6A926;D3Z8J0	PSB3_RAT	Psmb3	Proteasome subunit beta type-3	0	LNLYELK	LNLYELK	1	LNLYELK1	23894.1	27578.3	16906.9
P40112	A0A8I5ZRG0;P40112;A0A8I6A926;D3Z8J0	PSB3_RAT	Psmb3	Proteasome subunit beta type-3	0	LNLYELK	LNLYELK	2	LNLYELK2	6782.86	7018.54	2.68586e+06
B5DEY9	B5DEY9	B5DEY9_RAT	Csgalnact1	Hexosyltransferase	1	LNMANTLINVIVPLAR	LNMANTLINVIVPLAR	3	LNMANTLINVIVPLAR3	3151.26		4309.47
P52555	P52555	ERP29_RAT	Erp29	Endoplasmic reticulum resident protein 29	1	LNMELSEK	LNMELSEK	2	LNMELSEK2	37910.1	25283	36587
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	LNMHMNVQNGK	LNMHMNVQNGK	2	LNMHMNVQNGK2	4892.86	2449.89	3554.7
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	LNMHMNVQNGK	LNMHMNVQNGK	3	LNMHMNVQNGK3	36383.4	41396.4	39201.3
D4AE80	D4AE80	D4AE80_RAT	Dcp1a	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	LNMHNLVEPVNK	LNMHNLVEPVNK	3	LNMHNLVEPVNK3	11223.2	7297.03	7633.39
P15943	P15943	APLP2_RAT	Aplp2	Amyloid beta precursor like protein 2	1	LNMHVNIQTGK	LNMHVNIQTGK	2	LNMHVNIQTGK2	2320.47		
P15943	P15943	APLP2_RAT	Aplp2	Amyloid beta precursor like protein 2	1	LNMHVNIQTGK	LNMHVNIQTGK	3	LNMHVNIQTGK3	48007.2	38262.8	26045
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	LNMILVQILK	LNMILVQILK	2	LNMILVQILK2	11803	15960.5	10431.5
Q641X8	Q641X8;A0A0G2K273	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	0	LNMTPEEAER	LNMTPEEAER	2	LNMTPEEAER2	55369.6	41422.9	39811.3
P61131	P61131	SIA4C_RAT	St3gal4	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4	1	LNNAPVAGYEGDVGSK	LNNAPVAGYEGDVGSK	2	LNNAPVAGYEGDVGSK2	8377.68	9880.3	8218.58
A0A8I6AMS6	A0A8I6AMS6	A0A8I6AMS6_RAT	Rangap1	RAN GTPase activating protein 1	1	LNNCGMGIGGGK	LNNC(UniMod:4)GMGIGGGK	2	LNNC(UniMod:4)GMGIGGGK2	14772	11912.8	8612.3
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	LNNGGSYNAWSIEK	LNNGGSYNAWSIEK	2	LNNGGSYNAWSIEK2	1.46014e+06	1.65438e+06	1.55882e+06
P70619	P70619	GSHR_RAT	Gsr	Glutathione reductase (Fragment)	1	LNNIYQNNLTK	LNNIYQNNLTK	2	LNNIYQNNLTK2	24978.7	23904.6	17959.3
G3V6R4	G3V6R4	G3V6R4_RAT	Lrrc1	Leucine rich repeat containing 1	1	LNNLNADR	LNNLNADR	2	LNNLNADR2	15362.8	13260.5	15945
A0A8I5ZK89	A0A8I5ZK89	A0A8I5ZK89_RAT	Dock5	Dedicator of cytokinesis 5	1	LNNLQAVFTDLSSTDLIRPR	LNNLQAVFTDLSSTDLIRPR	3	LNNLQAVFTDLSSTDLIRPR3	6454.38	9371.76	
F1M086	F1M7K9;F1M086	F1M086_RAT	Elp4	Elongator complex protein 4	0	LNNLTCDESDVK	LNNLTC(UniMod:4)DESDVK	2	LNNLTC(UniMod:4)DESDVK2	2543.86	10471.6	3401.96
P62853	D3ZCH5;F1M6F4;P62853	RS25_RAT	Rps25	Small ribosomal subunit protein eS25	0	LNNLVLFDK	LNNLVLFDK	2	LNNLVLFDK2	21728.6	9669.29	16691.6
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	LNNNEISILEATGLFK	LNNNEISILEATGLFK	2	LNNNEISILEATGLFK2	3872.48	6509.59	5341.93
Q6QI44	Q6QI44	NAA25_RAT	Naa25	N-alpha-acetyltransferase 25, NatB auxiliary subunit	1	LNNSLHFAQVR	LNNSLHFAQVR	3	LNNSLHFAQVR3	4491.18	6484.19	4139.67
Q0D2L6	Q0D2L6;B2RZ38	Q0D2L6_RAT	Rragc	Ras-related GTP-binding protein	0	LNNTTVLYLK	LNNTTVLYLK	2	LNNTTVLYLK2	5775.12	7027.53	5588.05
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	LNPAALQPVLTDPTLHELYVISTFK	LNPAALQPVLTDPTLHELYVISTFK	3	LNPAALQPVLTDPTLHELYVISTFK3	50526.7	52275.7	66078.4
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	LNPAALQPVLTDPTLHELYVISTFK	LNPAALQPVLTDPTLHELYVISTFK	4	LNPAALQPVLTDPTLHELYVISTFK4	1421.67	4353.48	3943.56
Q9JL55	Q9JL55	GDE1_RAT	Gde1	Glycerophosphodiester phosphodiesterase 1	1	LNPAANHR	LNPAANHR	2	LNPAANHR2			63216.4
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	LNPAVPCVGK	LNPAVPC(UniMod:4)VGK	2	LNPAVPC(UniMod:4)VGK2	101767	98575.2	127251
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	LNPDTGELR	LNPDTGELR	2	LNPDTGELR2	83919.1	70476.9	105259
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	LNPGDIVELTK	LNPGDIVELTK	2	LNPGDIVELTK2	122088	146273	142299
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	LNPGINIHPMFSDETNICNGK	LNPGINIHPMFSDETNIC(UniMod:4)NGK	3	LNPGINIHPMFSDETNIC(UniMod:4)NGK3	24814.1	19419.6	15612.1
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	LNPGINIHPMFSDETNICNGKPVDGLTTLR	LNPGINIHPMFSDETNIC(UniMod:4)NGKPVDGLTTLR	4	LNPGINIHPMFSDETNIC(UniMod:4)NGKPVDGLTTLR4	173472	200100	190824
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	LNPHWDGDTVYHETR	LNPHWDGDTVYHETR	3	LNPHWDGDTVYHETR3	11455.4	14170.1	10780.1
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	LNPHWDGDTVYHETR	LNPHWDGDTVYHETR	4	LNPHWDGDTVYHETR4	30377	29557.1	19888.2
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	LNPHWDGDTVYHETRK	LNPHWDGDTVYHETRK	4	LNPHWDGDTVYHETRK4	6894.41	6415.56	4753.63
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	LNPLPAAAK	LNPLPAAAK	2	LNPLPAAAK2	79446.5	105037	90874.3
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	LNPNLYDNGK	LNPNLYDNGK	2	LNPNLYDNGK2	144867	194608	180523
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	LNPQASWEFEAEILVLHHPTTISPR	LNPQASWEFEAEILVLHHPTTISPR	4	LNPQASWEFEAEILVLHHPTTISPR4	14607.6	10331.6	16567
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	LNPQNAFFSGR	LNPQNAFFSGR	2	LNPQNAFFSGR2	172231	169485	170271
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	LNPQTGLIDYDQLALTAR	LNPQTGLIDYDQLALTAR	3	LNPQTGLIDYDQLALTAR3	14435.2	15203.9	17500.5
D3ZEE4	D3ZEE4	D3ZEE4_RAT	Plxdc1	Plexin domain containing 1	1	LNPYAEGDGLPDNSSPK	LNPYAEGDGLPDNSSPK	2	LNPYAEGDGLPDNSSPK2	9722.46	13303.6	11295.5
A0A0G2KA82	A0A0G2KA82	A0A0G2KA82_RAT	Sypl1	Synaptophysin-like 1	1	LNQASFHSAPNVNVCK	LNQASFHSAPNVNVC(UniMod:4)K	2	LNQASFHSAPNVNVC(UniMod:4)K2	4175.23	5625.44	3107.35
A0A0G2KA82	A0A0G2KA82	A0A0G2KA82_RAT	Sypl1	Synaptophysin-like 1	1	LNQASFHSAPNVNVCK	LNQASFHSAPNVNVC(UniMod:4)K	3	LNQASFHSAPNVNVC(UniMod:4)K3	63673.2	76364.2	75230.5
P00406	P00406	COX2_RAT	Mtco2	Cytochrome c oxidase subunit 2	1	LNQATVTSNR	LNQATVTSNR	2	LNQATVTSNR2		9061.11	10671.6
Q5M9G3	Q5M9G3	CAPR1_RAT	Caprin1	Caprin-1	1	LNQDQLDAVSK	LNQDQLDAVSK	2	LNQDQLDAVSK2	18465.4	28425.8	35498.6
A0A8I5ZJ62	A0A8I5ZJ62	A0A8I5ZJ62_RAT	Glipr2	GLI pathogenesis-related 2	1	LNQEAQQYSEALASTR	LNQEAQQYSEALASTR	2	LNQEAQQYSEALASTR2	38128.3	35559.8	34667.3
A0A8I5ZJ62	A0A8I5ZJ62	A0A8I5ZJ62_RAT	Glipr2	GLI pathogenesis-related 2	1	LNQEAQQYSEALASTR	LNQEAQQYSEALASTR	3	LNQEAQQYSEALASTR3	23003.2	28622.5	20271.9
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	LNQEEPAR	LNQEEPAR	1	LNQEEPAR1	6442.57		2198.49
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	LNQEEPAR	LNQEEPAR	2	LNQEEPAR2	413429		632252
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	LNQEEPARFPK	LNQEEPARFPK	2	LNQEEPARFPK2	26816.6	32786.5	21614.8
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	LNQEEPARFPK	LNQEEPARFPK	3	LNQEEPARFPK3	731154	947693	914078
Q811A2	Q811A2	BST2_RAT	Bst2	Bone marrow stromal antigen 2	1	LNQELENLR	LNQELENLR	2	LNQELENLR2	15960.1	13044.2	15599.9
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	LNQELQR	LNQELQR	2	LNQELQR2	23084.5	28503.3	
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	LNQENEHIYNLWCSGR	LNQENEHIYNLWC(UniMod:4)SGR	3	LNQENEHIYNLWC(UniMod:4)SGR3	19560.3	21734.8	36076.6
Q6AY30	Q6AY30	SCPDL_RAT	Sccpdh	Saccharopine dehydrogenase-like oxidoreductase	1	LNQHGIQFSVISSSEV	LNQHGIQFSVISSSEV	2	LNQHGIQFSVISSSEV2	18813.3	14298.2	9134.44
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	LNQISPQFIK	LNQISPQFIK	2	LNQISPQFIK2	6657.58	7455.43	6209.71
Q5XI83	Q5XI83	VP35L_RAT	Vps35l	VPS35 endosomal protein-sorting factor-like	1	LNQLSVNLWHLAQR	LNQLSVNLWHLAQR	3	LNQLSVNLWHLAQR3	9825.66	10366.8	6961.03
A0A8I6ANL9	A0A8I6ANL9	A0A8I6ANL9_RAT	Cdc23	Cell division cycle 23	1	LNQLVEAK	LNQLVEAK	2	LNQLVEAK2	14868.9	13263.8	17476.3
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	LNQPDCGYGAGGTGVSVTPAQR	LNQPDC(UniMod:4)GYGAGGTGVSVTPAQR	3	LNQPDC(UniMod:4)GYGAGGTGVSVTPAQR3	121390	146903	155375
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	LNQQAHQLAFDSVFLR	LNQQAHQLAFDSVFLR	3	LNQQAHQLAFDSVFLR3	3647.68	10999.3	
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	LNQQEQEDLELAIALSK	LNQQEQEDLELAIALSK	2	LNQQEQEDLELAIALSK2	18285.1	12682.2	11439.9
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	LNQQEQEDLELAIALSK	LNQQEQEDLELAIALSK	3	LNQQEQEDLELAIALSK3	18338.5	24978.9	13217
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	LNQQLTSK	LNQQLTSK	2	LNQQLTSK2	16132.6	12012.5	12772.5
Q6MG06	Q6MG06	GNL1_RAT	Gnl1	Guanine nucleotide-binding protein-like 1	1	LNQQPSQGLGPR	LNQQPSQGLGPR	2	LNQQPSQGLGPR2	11933.6	9267.23	13748.6
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	LNQRYEMHELLK	LNQRYEMHELLK	3	LNQRYEMHELLK3	15420.5	18799.9	17477.9
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	LNQRYEMHELLK	LNQRYEMHELLK	4	LNQRYEMHELLK4	6702.3	10351.2	5056.12
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	LNQSDSIEDPNSPAGR	LNQSDSIEDPNSPAGR	2	LNQSDSIEDPNSPAGR2	22205.2	22620.3	19465.9
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	LNQSDSIEDPNSPAGRR	LNQSDSIEDPNSPAGRR	3	LNQSDSIEDPNSPAGRR3	6609.39	13783.7	7488.47
B4F779	B4F779	DP13B_RAT	Appl2	DCC-interacting protein 13-beta	1	LNQTALQAVTPITSFGK	LNQTALQAVTPITSFGK	2	LNQTALQAVTPITSFGK2	2569.54	3597.28	4475.48
Q05096	Q05096	MYO1B_RAT	Myo1b	Unconventional myosin-Ib	1	LNQVCATHQHFESR	LNQVC(UniMod:4)ATHQHFESR	3	LNQVC(UniMod:4)ATHQHFESR3	3931.05		
Q05096	Q05096	MYO1B_RAT	Myo1b	Unconventional myosin-Ib	1	LNQVCATHQHFESR	LNQVC(UniMod:4)ATHQHFESR	4	LNQVC(UniMod:4)ATHQHFESR4	7613.68		3794.93
Q66HC5	Q66HC5	NUP93_RAT	Nup93	Nuclear pore complex protein Nup93	1	LNQVCFDDDGTSSPQDR	LNQVC(UniMod:4)FDDDGTSSPQDR	2	LNQVC(UniMod:4)FDDDGTSSPQDR2	2820.92	4784.41	2734.26
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	LNQWCNVVR	LNQWC(UniMod:4)NVVR	2	LNQWC(UniMod:4)NVVR2	71695.7	66412.9	71990.1
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	LNRPLTLSEK	LNRPLTLSEK	3	LNRPLTLSEK3	101126	65770.4	98040.1
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	LNRVEPNLDAALYWPVNQK	LNRVEPNLDAALYWPVNQK	3	LNRVEPNLDAALYWPVNQK3	13185.1	21751.7	33898.4
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	LNSCFIK	LNSC(UniMod:4)FIK	2	LNSC(UniMod:4)FIK2	178141	174820	178518
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	LNSDFDR	LNSDFDR	2	LNSDFDR2	45855.7	40276.4	43051.5
Q6P6G4	Q6P6G4	Q6P6G4_RAT	Bpgm	Phosphoglycerate mutase	1	LNSDGLEEAR	LNSDGLEEAR	2	LNSDGLEEAR2	3726.33	3095.41	5118.99
P70645	P70645	BLMH_RAT	Blmh	Bleomycin hydrolase	1	LNSDPQFVLAQNVGTTHDLLDICLK	LNSDPQFVLAQNVGTTHDLLDIC(UniMod:4)LK	3	LNSDPQFVLAQNVGTTHDLLDIC(UniMod:4)LK3	21319.1	16203.7	18691.8
P70645	P70645	BLMH_RAT	Blmh	Bleomycin hydrolase	1	LNSDPQFVLAQNVGTTHDLLDICLKR	LNSDPQFVLAQNVGTTHDLLDIC(UniMod:4)LKR	4	LNSDPQFVLAQNVGTTHDLLDIC(UniMod:4)LKR4	8082.05	1773.72	4915.11
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	LNSEECADVLK	LNSEEC(UniMod:4)ADVLK	2	LNSEEC(UniMod:4)ADVLK2	11275.6	8698.35	
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	LNSEECADVLKR	LNSEEC(UniMod:4)ADVLKR	3	LNSEEC(UniMod:4)ADVLKR3	5287.33	4012.38	1951.15
P18297	D3ZT59;P18297	SPRE_RAT	Spr	Sepiapterin reductase	0	LNSEGELVDCGTSAQK	LNSEGELVDC(UniMod:4)GTSAQK	2	LNSEGELVDC(UniMod:4)GTSAQK2	1628.71		6015.71
A0A8I6GJC5	A0A8I6AED1;A0A8I6GJC5	A0A8I6GJC5_RAT	Reps1	RALBP1 associated Eps domain containing 1	0	LNSELQQQLK	LNSELQQQLK	2	LNSELQQQLK2	19287	26267.7	32681
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	LNSGDYK	LNSGDYK	2	LNSGDYK2	83065.9	90373.5	97611.8
A0A8I5Y6A1	A0A8I5Y6A1	A0A8I5Y6A1_RAT	Ablim1	Actin-binding LIM protein 1	1	LNSGLGQLILK	LNSGLGQLILK	2	LNSGLGQLILK2	9107.39	4185.2	4897.64
D3ZG07	D3ZG07	D3ZG07_RAT	Lsm6	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated	1	LNSGVDYR	LNSGVDYR	2	LNSGVDYR2	32602.4	29617.9	18973.2
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	LNSIEFTDIIK	LNSIEFTDIIK	2	LNSIEFTDIIK2	55835.2	59855.7	59711.5
Q5BQE6	Q5BQE6	DHC24_RAT	Dhcr24	Delta(24)-sterol reductase	1	LNSIGSYYK	LNSIGSYYK	2	LNSIGSYYK2		10730.5	
Q5BQE6	Q5BQE6	DHC24_RAT	Dhcr24	Delta(24)-sterol reductase	1	LNSIGSYYKPWFFK	LNSIGSYYKPWFFK	3	LNSIGSYYKPWFFK3	17109.6	16714	21112.4
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	LNSLAIGLR	LNSLAIGLR	2	LNSLAIGLR2	35796.8	27978.9	30487.7
Q4QQT4	Q4QQT4;Q5XI34	2AAB_RAT	Ppp2r1b	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	0	LNSLCMAWLVDHVYAIR	LNSLC(UniMod:4)MAWLVDHVYAIR	3	LNSLC(UniMod:4)MAWLVDHVYAIR3	15908.6	2874.25	5848.61
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	LNSLMSLVNK	LNSLMSLVNK	2	LNSLMSLVNK2	139073	148729	157853
B1H257	B1H257	B1H257_RAT	Borcs5	BLOC-1-related complex subunit 5	1	LNSMLPEAER	LNSMLPEAER	2	LNSMLPEAER2	17401.4	14279	19257.6
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	LNSNLEYIK	LNSNLEYIK	2	LNSNLEYIK2	42526.3	50485.2	38282.3
Q6P3V8	A0A8I6GF11;Q6P3V8	Q6P3V8_RAT	Eif4a1	ATP-dependent RNA helicase	0	LNSNTQVVLLSATMPSDVLEVTK	LNSNTQVVLLSATMPSDVLEVTK	3	LNSNTQVVLLSATMPSDVLEVTK3	8760.19	8837.57	10239.7
Q6P3V8	A0A8I6GF11;Q6P3V8	Q6P3V8_RAT	Eif4a1	ATP-dependent RNA helicase	0	LNSNTQVVLLSATMPSDVLEVTKK	LNSNTQVVLLSATMPSDVLEVTKK	3	LNSNTQVVLLSATMPSDVLEVTKK3	38011.6	36254	32378.4
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	LNSSQTADLLK	LNSSQTADLLK	2	LNSSQTADLLK2	11727.1	7679.22	7855.41
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	LNSSSGSGGGSSSSNSSSSSGVGSPSWAGR	LNSSSGSGGGSSSSNSSSSSGVGSPSWAGR	3	LNSSSGSGGGSSSSNSSSSSGVGSPSWAGR3	7472.98	6220.17	6352.21
Q5XID7	Q5XID7	ARMX3_RAT	Armcx3	Armadillo repeat-containing X-linked protein 3	1	LNSSVQLAGLR	LNSSVQLAGLR	2	LNSSVQLAGLR2	5643.44	2949.32	2493.03
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	LNSTGMYVANTK	LNSTGMYVANTK	2	LNSTGMYVANTK2			3130.63
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	LNSVQSSERPLFLVHPIEGSITVFHSLAAK	LNSVQSSERPLFLVHPIEGSITVFHSLAAK	4	LNSVQSSERPLFLVHPIEGSITVFHSLAAK4	3704.93	3454.66	6782.9
Q0H8B9	Q0H8B9	CL2DB_RAT	Clec2d11	C-type lectin domain family 2 member D11	1	LNSYSLQCK	LNSYSLQC(UniMod:4)K	2	LNSYSLQC(UniMod:4)K2	52419.5	50609.9	63291.1
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	LNTDPMLLQFFK	LNTDPMLLQFFK	2	LNTDPMLLQFFK2	37449.5	37503.7	29505.3
P54001	P54001	P4HA1_RAT	P4ha1	Prolyl 4-hydroxylase subunit alpha-1	1	LNTEWSELENLILK	LNTEWSELENLILK	2	LNTEWSELENLILK2	5534.11	8476.64	8059.97
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	LNTFGDEVFNDPK	LNTFGDEVFNDPK	2	LNTFGDEVFNDPK2	86776.8	111095	102686
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	LNTFGDEVFNDPK	LNTFGDEVFNDPK	3	LNTFGDEVFNDPK3	15945.2	18972.3	20350.5
P23785	P23785	GRN_RAT	Grn	Progranulin	1	LNTGAWGCCPFTK	LNTGAWGC(UniMod:4)C(UniMod:4)PFTK	2	LNTGAWGC(UniMod:4)C(UniMod:4)PFTK2	480932	613153	537802
P23785	P23785	GRN_RAT	Grn	Progranulin	1	LNTGAWGCCPFTK	LNTGAWGC(UniMod:4)C(UniMod:4)PFTK	3	LNTGAWGC(UniMod:4)C(UniMod:4)PFTK3	2270.18	9048.11	7886.61
Q32Q06	Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	1	LNTHVKPLIWIESVIEK	LNTHVKPLIWIESVIEK	3	LNTHVKPLIWIESVIEK3	10992.3	20198.4	24444.4
Q32Q06	Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	1	LNTHVKPLIWIESVIEK	LNTHVKPLIWIESVIEK	4	LNTHVKPLIWIESVIEK4	46565.8	51638.3	37811.2
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	LNTIIDSDK	LNTIIDSDK	2	LNTIIDSDK2	45209.1	56298.3	49536.2
Q8CG09	A0A0G2K5H6;Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	0	LNTIMDYTR	LNTIMDYTR	2	LNTIMDYTR2	28063.9	30384	32770.6
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	LNTIPLFVQLLYSSVENIQR	LNTIPLFVQLLYSSVENIQR	3	LNTIPLFVQLLYSSVENIQR3			6461.37
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	LNTLPTLISMR	LNTLPTLISMR	2	LNTLPTLISMR2	72342.5	71366.1	64928.6
Q01992	Q01992	MIPEP_RAT	Mipep	Mitochondrial intermediate peptidase	1	LNTNVELYQSLQK	LNTNVELYQSLQK	2	LNTNVELYQSLQK2	1015.56	936.983	
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LNTQEIFDDWAR	LNTQEIFDDWAR	2	LNTQEIFDDWAR2	67470.2	93452	73206.5
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LNTQEIFDDWAR	LNTQEIFDDWAR	3	LNTQEIFDDWAR3	10323.2	10614.8	6565.92
B2GUX8	B2GUX8	B2GUX8_RAT	Sh3bp5l	SH3 domain-binding protein 5	1	LNTQGSHLGSCIEK	LNTQGSHLGSC(UniMod:4)IEK	3	LNTQGSHLGSC(UniMod:4)IEK3	25511.6	32812.8	31834.9
P51792	P51792	CLCN3_RAT	Clcn3	H(+)/Cl(-) exchange transporter 3	1	LNTSELIK	LNTSELIK	2	LNTSELIK2	57387.6	80649.6	70758
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	LNTVAHYQVPDGSLVALVSK	LNTVAHYQVPDGSLVALVSK	3	LNTVAHYQVPDGSLVALVSK3	32531.1	43984.3	35713.1
P51583	P51583;A0A0G2K5S4	PUR6_RAT	Paics	Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase	0	LNTWISLK	LNTWISLK	2	LNTWISLK2	37624.4	39568.4	24341
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	LNVAEVTQSEIGQK	LNVAEVTQSEIGQK	2	LNVAEVTQSEIGQK2	470353	453917	451712
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	LNVAEVTQSEIGQK	LNVAEVTQSEIGQK	3	LNVAEVTQSEIGQK3	149829	143918	147672
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	LNVAFMESK	LNVAFMESK	2	LNVAFMESK2	49753.7	45898.5	64657.9
Q66H50	Q66H50	FACR1_RAT	Far1	Fatty acyl-CoA reductase 1	1	LNVAIVRPSIVGASWK	LNVAIVRPSIVGASWK	3	LNVAIVRPSIVGASWK3	7409.37	5923.58	4146.34
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	LNVALTR	LNVALTR	2	LNVALTR2	23804.6		
P13803	P13803	ETFA_RAT	Etfa	Electron transfer flavoprotein subunit alpha, mitochondrial	1	LNVAPVSDIIEIK	LNVAPVSDIIEIK	2	LNVAPVSDIIEIK2	178668	199917	193782
A0A8I6AHX5	A0A8I6AHX5	A0A8I6AHX5_RAT	Aven	Apoptosis and caspase activation inhibitor	1	LNVASELIQTAVPLELPQAK	LNVASELIQTAVPLELPQAK	3	LNVASELIQTAVPLELPQAK3		5965.48	7578.23
P47868	P47868	SCG3_RAT	Scg3	Secretogranin-3	1	LNVDDADSTK	LNVDDADSTK	2	LNVDDADSTK2	10617.4	13229.1	11798.4
D3Z8L7	D3Z8L7	RRAS_RAT	Rras	Ras-related protein R-Ras	1	LNVDEAFEQLVR	LNVDEAFEQLVR	2	LNVDEAFEQLVR2	103746	128122	139205
D3Z8L7	D3Z8L7	RRAS_RAT	Rras	Ras-related protein R-Ras	1	LNVDEAFEQLVR	LNVDEAFEQLVR	3	LNVDEAFEQLVR3	5560.55	4240.63	5094.58
P60892	A0A0G2JSV3;P60892	PRPS1_RAT	Prps1	Ribose-phosphate pyrophosphokinase 1	0	LNVDFALIHK	LNVDFALIHK	3	LNVDFALIHK3	20397.4	10102.4	14783.3
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	LNVDGVEIYVIVTR	LNVDGVEIYVIVTR	2	LNVDGVEIYVIVTR2	6952.56	8298.38	5695.26
P09330	P09330	PRPS2_RAT	Prps2	Ribose-phosphate pyrophosphokinase 2	1	LNVEFALIHK	LNVEFALIHK	3	LNVEFALIHK3	8756.07	6005.16	9249.04
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LNVGGNFK	LNVGGNFK	1	LNVGGNFK1	19705.5	19907.2	14432.6
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LNVGGNFK	LNVGGNFK	2	LNVGGNFK2	3.85686e+06	4.41751e+06	4.64885e+06
D3ZRI9	D3ZRI9	D3ZRI9_RAT	Gan	Gigaxonin	1	LNVGNER	LNVGNER	2	LNVGNER2	28378.4	27778.9	35415.7
Q1H5H1	Q1H5H1	SELT_RAT	Selenot	Thioredoxin reductase-like selenoprotein T	1	LNVHMDSIPHHR	LNVHMDSIPHHR	3	LNVHMDSIPHHR3	22167.6	10595	4929.9
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	LNVHMNPPQVK	LNVHMNPPQVK	3	LNVHMNPPQVK3	39380.4	38384.9	46241.4
Q0Z843	Q0Z843	Q0Z843_RAT	Fig4	FIG4 phosphoinositide 5-phosphatase	1	LNVIAESVVK	LNVIAESVVK	2	LNVIAESVVK2	4808.5	5785.46	4408.39
D3ZPV8	D3ZPV8	D3ZPV8_RAT	Ggct	Gamma-glutamyl cyclotransferase	1	LNVIEPNDYK	LNVIEPNDYK	2	LNVIEPNDYK2	7793.3	4692.35	3531.07
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	LNVIFTK	LNVIFTK	2	LNVIFTK2	31423	33585.1	21458.5
Q5XI78	Q5XI78;D3ZQD3	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	0	LNVLANVIR	LNVLANVIR	2	LNVLANVIR2	130201	137247	124668
A0A0G2JWD0	A0A0G2JWD0	A0A0G2JWD0_RAT	Prom1	Prominin 1	1	LNVNIDSIELLDK	LNVNIDSIELLDK	2	LNVNIDSIELLDK2	11144.5	15593	12977.9
D3ZLN7	D3ZLN7	D3ZLN7_RAT	Commd2	COMM domain containing 2	1	LNVSSDTIQHGVEGLTYLLTESSK	LNVSSDTIQHGVEGLTYLLTESSK	3	LNVSSDTIQHGVEGLTYLLTESSK3	2287.75	7294.18	
P14882	P14882	PCCA_RAT	Pcca	Propionyl-CoA carboxylase alpha chain, mitochondrial	1	LNVTSTWNLASPLLSVNVDGTQR	LNVTSTWNLASPLLSVNVDGTQR	3	LNVTSTWNLASPLLSVNVDGTQR3			2014.74
P04764	M0R5J4;A0A8I6GJ97;A0A8I6ASH7;P04764;A0A8I5YC61	ENOA_RAT	Eno1	Alpha-enolase	0	LNVVEQEK	LNVVEQEK	1	LNVVEQEK1	1079.16	616.137	
P04764	M0R5J4;A0A8I6GJ97;A0A8I6ASH7;P04764;A0A8I5YC61	ENOA_RAT	Eno1	Alpha-enolase	0	LNVVEQEK	LNVVEQEK	2	LNVVEQEK2	178758	156393	178347
A0A8I5ZQQ3	A0A8I5ZQQ3	A0A8I5ZQQ3_RAT	Pdpr	Pyruvate dehydrogenase phosphatase regulatory subunit	1	LNVVGIPSEIISPK	LNVVGIPSEIISPK	2	LNVVGIPSEIISPK2	5811.46	3944.01	10853.6
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	LNVVYTEDHVFSSEYYSPLR	LNVVYTEDHVFSSEYYSPLR	3	LNVVYTEDHVFSSEYYSPLR3	567432	580342	587033
P37996	P37996	ARL3_RAT	Arl3	ADP-ribosylation factor-like protein 3	1	LNVWDIGGQR	LNVWDIGGQR	2	LNVWDIGGQR2	3220.97	5841.76	6835.05
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LNVYFRPQSPPDNK	LNVYFRPQSPPDNK	2	LNVYFRPQSPPDNK2	19862.7	34778.1	28282
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LNVYFRPQSPPDNK	LNVYFRPQSPPDNK	3	LNVYFRPQSPPDNK3	1.00713e+06	1.42112e+06	1.292e+06
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	LNWEAPLGSFDSFLLR	LNWEAPLGSFDSFLLR	2	LNWEAPLGSFDSFLLR2	7052.11	42607.8	62788
F7F9K9	F7F9K9	F7F9K9_RAT	Ndufb8	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial	1	LNWGEPIHWDLDMYIR	LNWGEPIHWDLDMYIR	3	LNWGEPIHWDLDMYIR3	4763.56	5331.35	4164.14
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	LNWGHIPVNPR	LNWGHIPVNPR	2	LNWGHIPVNPR2	12012.5	6402.49	5402.08
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	LNWGHIPVNPR	LNWGHIPVNPR	3	LNWGHIPVNPR3	173758	159657	156423
P83868	P83868;Q5PQL9	TEBP_RAT	Ptges3	Prostaglandin E synthase 3	0	LNWLSVDFNNWK	LNWLSVDFNNWK	2	LNWLSVDFNNWK2	67626.9	82370.9	61980.5
D3ZRD3	D3ZRD3	D3ZRD3_RAT	Pde6d	Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta	1	LNWMNLR	LNWMNLR	2	LNWMNLR2	15460.9	9094.74	12958.7
M0R8P6	M0R8P6	M0R8P6_RAT	Wwc3	Uncharacterized protein	1	LNWQYEEAR	LNWQYEEAR	2	LNWQYEEAR2		4686.09	
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	LNWWVSVDSTCQR	LNWWVSVDSTC(UniMod:4)QR	2	LNWWVSVDSTC(UniMod:4)QR2	24648.7	19464.2	17259.8
A0A8I5XWT0	A0A8I5XWT0	A0A8I5XWT0_RAT	Cd55	CD55 molecule (Cromer blood group)	1	LNYASLK	LNYASLK	1	LNYASLK1	2939.29	4432.98	3840.6
A0A8I5XWT0	A0A8I5XWT0	A0A8I5XWT0_RAT	Cd55	CD55 molecule (Cromer blood group)	1	LNYASLK	LNYASLK	2	LNYASLK2	910508	1.02663e+06	994700
A0A8I5XWT0	A0A8I5XWT0	A0A8I5XWT0_RAT	Cd55	CD55 molecule (Cromer blood group)	1	LNYASLKK	LNYASLKK	2	LNYASLKK2	37089.9	38115.7	35766.8
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	LNYGIPAIVK	LNYGIPAIVK	2	LNYGIPAIVK2	43767	27410.6	32988.6
Q6Q0N1	Q6Q0N1	CNDP2_RAT	Cndp2	Cytosolic non-specific dipeptidase	1	LNYIEGTK	LNYIEGTK	2	LNYIEGTK2	35435.4	42216.6	48034.7
Q5M860	Q5M860	Q5M860_RAT	Arhgdib	Rho GDP dissociation inhibitor beta	1	LNYKPPPQK	LNYKPPPQK	2	LNYKPPPQK2	10418.4	1911.95	4336.76
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	LNYLDILVR	LNYLDILVR	2	LNYLDILVR2	403186	396805	401591
D3ZRI9	D3ZRI9	D3ZRI9_RAT	Gan	Gigaxonin	1	LNYNPPKDDGSTYK	LNYNPPKDDGSTYK	3	LNYNPPKDDGSTYK3	9607.79	4803.21	9294.17
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	LNYSDHDVIK	LNYSDHDVIK	2	LNYSDHDVIK2	8215.51	6393.57	7462.29
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	LNYSDHDVIK	LNYSDHDVIK	3	LNYSDHDVIK3	39436.4	46619.9	34076.5
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	LNYSLPTGQSIEIQLPK	LNYSLPTGQSIEIQLPK	2	LNYSLPTGQSIEIQLPK2	56459.5	29255.5	27055.2
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	LNYSLPTGQSIEIQLPK	LNYSLPTGQSIEIQLPK	3	LNYSLPTGQSIEIQLPK3	1298.49	2899.2	1912.54
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	LNYVEGDYK	LNYVEGDYK	2	LNYVEGDYK2	20268	21346.9	26273.3
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	LNYYVGGEIVTIAHLDR	LNYYVGGEIVTIAHLDR	3	LNYYVGGEIVTIAHLDR3	3742.57	6554.17	11577.9
Q9Z254	Q9Z254	GIPC1_RAT	Gipc1	PDZ domain-containing protein GIPC1	1	LPAAEVMFCTLNTHK	LPAAEVMFC(UniMod:4)TLNTHK	3	LPAAEVMFC(UniMod:4)TLNTHK3	13405.8	16319.4	8652.07
P62832	P62832	RL23_RAT	Rpl23	Large ribosomal subunit protein uL14	1	LPAAGVGDMVMATVK	LPAAGVGDMVMATVK	2	LPAAGVGDMVMATVK2	9051.98	7556.75	5507.48
P62832	P62832	RL23_RAT	Rpl23	Large ribosomal subunit protein uL14	1	LPAAGVGDMVMATVK	LPAAGVGDMVMATVK	3	LPAAGVGDMVMATVK3	7364.45	3209.82	6400.42
Q4V7C7	Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	1	LPACVVDCGTGYTK	LPAC(UniMod:4)VVDC(UniMod:4)GTGYTK	2	LPAC(UniMod:4)VVDC(UniMod:4)GTGYTK2	522693	535306	530117
Q1HAQ0	Q1HAQ0	PCAT1_RAT	Lpcat1	Lysophosphatidylcholine acyltransferase 1	1	LPADTCLLEFAR	LPADTC(UniMod:4)LLEFAR	2	LPADTC(UniMod:4)LLEFAR2	64799.7	59303.2	73484.6
P48500	P48500	TPIS_RAT	Tpi1	Triosephosphate isomerase	1	LPADTEVVCAPPTAYIDFAR	LPADTEVVC(UniMod:4)APPTAYIDFAR	3	LPADTEVVC(UniMod:4)APPTAYIDFAR3	162545	163989	185019
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	LPAEHQAEEACQPAER	LPAEHQAEEAC(UniMod:4)QPAER	3	LPAEHQAEEAC(UniMod:4)QPAER3	68434.1	86904.5	78456.4
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	LPAESNEK	LPAESNEK	2	LPAESNEK2	58621.7		64337.4
Q5XIA1	Q5XIA1	NCLN_RAT	Ncln	BOS complex subunit NCLN	1	LPAFTLSHLENHR	LPAFTLSHLENHR	4	LPAFTLSHLENHR4	5930.83	4388.35	4970.16
P51886	P51886	LUM_RAT	Lum	Lumican	1	LPAGLPTSLLTLYLDNNK	LPAGLPTSLLTLYLDNNK	2	LPAGLPTSLLTLYLDNNK2	5.50751e+06	5.61928e+06	5.51957e+06
P51886	P51886	LUM_RAT	Lum	Lumican	1	LPAGLPTSLLTLYLDNNK	LPAGLPTSLLTLYLDNNK	3	LPAGLPTSLLTLYLDNNK3	2.00969e+06	1.87445e+06	1.96066e+06
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	LPAIEPSDQGQYLCR	LPAIEPSDQGQYLC(UniMod:4)R	2	LPAIEPSDQGQYLC(UniMod:4)R2	62917.9	60819.3	49912.2
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	LPAIEPSDQGQYLCR	LPAIEPSDQGQYLC(UniMod:4)R	3	LPAIEPSDQGQYLC(UniMod:4)R3	39447.3	22462.7	30447.2
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	LPAKPEVSSDEDIQYR	LPAKPEVSSDEDIQYR	3	LPAKPEVSSDEDIQYR3	36917.3	35175	28145.1
A0A8I6ANU2	A0A8I6ANU2	A0A8I6ANU2_RAT	Ptcd3	Pentatricopeptide repeat domain 3	1	LPALQILR	LPALQILR	2	LPALQILR2	8850.67	3665.85	3168.44
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	LPALVPPPPPALR	LPALVPPPPPALR	2	LPALVPPPPPALR2	35245	37323.1	45288
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	LPALVPPPPPALR	LPALVPPPPPALR	3	LPALVPPPPPALR3	1184.79	1464.22	
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	LPANHPLLTGQR	LPANHPLLTGQR	2	LPANHPLLTGQR2	2770.76		4534.49
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	LPANHPLLTGQR	LPANHPLLTGQR	3	LPANHPLLTGQR3	142881	137481	123656
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	LPANQYTWSSR	LPANQYTWSSR	2	LPANQYTWSSR2	48078.6	39240.3	34219.5
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	LPANTADISQR	LPANTADISQR	2	LPANTADISQR2	3791.55		
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	LPAPPSGTESSSTLSLMAPTPEQESSR	LPAPPSGTESSSTLSLMAPTPEQESSR	3	LPAPPSGTESSSTLSLMAPTPEQESSR3	10741.6	12539	4399.53
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	LPAPSIDR	LPAPSIDR	2	LPAPSIDR2	1.14714e+06	1.02011e+06	1.22158e+06
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	LPAQLGQCR	LPAQLGQC(UniMod:4)R	2	LPAQLGQC(UniMod:4)R2	20667.9	24866.4	24233.8
P15650	P15650	ACADL_RAT	Acadl	Long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	LPASALLGEENK	LPASALLGEENK	2	LPASALLGEENK2	80836.9	74425.4	72387.5
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	LPASCLPASDSFR	LPASC(UniMod:4)LPASDSFR	2	LPASC(UniMod:4)LPASDSFR2	25721.3	5135.46	15433
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	LPASLSEGR	LPASLSEGR	2	LPASLSEGR2	1.52006e+06	1.39252e+06	1.31852e+06
Q5I0D7	Q5I0D7	PEPD_RAT	Pepd	Xaa-Pro dipeptidase	1	LPASYATWMGK	LPASYATWMGK	2	LPASYATWMGK2	11531.1	13443	10732.1
A0A8I5ZRQ9	A0A8I5ZRQ9	A0A8I5ZRQ9_RAT	Akt1s1	AKT1 substrate 1	1	LPATALPTQQYAK	LPATALPTQQYAK	2	LPATALPTQQYAK2	25292.1	29948.8	24485
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	LPATEKPVLLSK	LPATEKPVLLSK	2	LPATEKPVLLSK2	10342	11574.3	8413.34
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	LPATEKPVLLSK	LPATEKPVLLSK	3	LPATEKPVLLSK3	1.41818e+06	1.51905e+06	1.5218e+06
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	LPATLTDHHHLLFTFYHVSCQQK	LPATLTDHHHLLFTFYHVSC(UniMod:4)QQK	4	LPATLTDHHHLLFTFYHVSC(UniMod:4)QQK4	9902.04	8554.51	6209.82
Q9QWG5	Q9QWG5	INP4B_RAT	Inpp4b	Type II inositol 3,4-bisphosphate 4-phosphatase	1	LPATVFESLPLQIK	LPATVFESLPLQIK	2	LPATVFESLPLQIK2	6622.65	5553.39	3365.93
Q68FU3	Q68FU3	ETFB_RAT	Etfb	Electron transfer flavoprotein subunit beta	1	LPAVVTADLR	LPAVVTADLR	2	LPAVVTADLR2	31030.5	35381.1	26041.3
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	LPAYFVVPTPLLEDDVKR	LPAYFVVPTPLLEDDVKR	3	LPAYFVVPTPLLEDDVKR3	31353.4	38459.1	32469
A0A8I5ZY29	A0A8I5ZY29	A0A8I5ZY29_RAT	Usp14	Ubiquitin carboxyl-terminal hydrolase	1	LPAYLTIQMVR	LPAYLTIQMVR	2	LPAYLTIQMVR2	16162.3	18085.5	15798.1
Q99P99	Q99P99	HDAC4_RAT	Hdac4	Histone deacetylase 4	1	LPCGGVGVDSDTIWNEVHSSGAAR	LPC(UniMod:4)GGVGVDSDTIWNEVHSSGAAR	3	LPC(UniMod:4)GGVGVDSDTIWNEVHSSGAAR3	3735.19		5945.24
D4A5G8	D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	LPCIFICENNR	LPC(UniMod:4)IFIC(UniMod:4)ENNR	2	LPC(UniMod:4)IFIC(UniMod:4)ENNR2	24685.5	25675.9	19702
Q5XIT9	Q5XIT9	MCCB_RAT	Mccc2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	1	LPCIYLVDSGGANLPR	LPC(UniMod:4)IYLVDSGGANLPR	2	LPC(UniMod:4)IYLVDSGGANLPR2	8189.97	9089.9	8538.8
Q9JHY1	Q9JHY1	JAM1_RAT	F11r	Junctional adhesion molecule A	1	LPCIYSGFSSPR	LPC(UniMod:4)IYSGFSSPR	2	LPC(UniMod:4)IYSGFSSPR2	515243	467563	587741
Q9JHY1	Q9JHY1	JAM1_RAT	F11r	Junctional adhesion molecule A	1	LPCIYSGFSSPR	LPC(UniMod:4)IYSGFSSPR	3	LPC(UniMod:4)IYSGFSSPR3	12454.8	5998.69	11293.4
F7FG68	F7FG68	F7FG68_RAT	Syvn1	Synoviolin 1	1	LPCNHIFHTSCLR	LPC(UniMod:4)NHIFHTSC(UniMod:4)LR	4	LPC(UniMod:4)NHIFHTSC(UniMod:4)LR4	7260.65		1424.93
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	LPCPQGLDPDIEDASPVCR	LPC(UniMod:4)PQGLDPDIEDASPVC(UniMod:4)R	3	LPC(UniMod:4)PQGLDPDIEDASPVC(UniMod:4)R3	7697.23	9383.51	14987.2
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	LPCQLHQVIVAR	LPC(UniMod:4)QLHQVIVAR	2	LPC(UniMod:4)QLHQVIVAR2	95133.3	81370.5	69880.7
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	LPCQLHQVIVAR	LPC(UniMod:4)QLHQVIVAR	3	LPC(UniMod:4)QLHQVIVAR3	1.84029e+06	2.0667e+06	1.94215e+06
B5DEH0	B5DEH0	LIMD1_RAT	Limd1	LIM domain-containing protein 1	1	LPCQTLTPGPELGPSTAELK	LPC(UniMod:4)QTLTPGPELGPSTAELK	3	LPC(UniMod:4)QTLTPGPELGPSTAELK3	7416.11	9305.97	
Q9Z272	Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	1	LPCRDDDGVTAK	LPC(UniMod:4)RDDDGVTAK	3	LPC(UniMod:4)RDDDGVTAK3	28384	41621.3	34525.9
Q66H91	Q66H91	GIT2_RAT	Git2	ARF GTPase-activating protein GIT2	1	LPCRDDDSVTAK	LPC(UniMod:4)RDDDSVTAK	3	LPC(UniMod:4)RDDDSVTAK3	37749.1	37238.4	34975.2
P02770	P02770	ALBU_RAT	Alb	Albumin	1	LPCVEDYLSAILNR	LPC(UniMod:4)VEDYLSAILNR	2	LPC(UniMod:4)VEDYLSAILNR2	2.16661e+06	1.96861e+06	1.83032e+06
P02770	P02770	ALBU_RAT	Alb	Albumin	1	LPCVEDYLSAILNR	LPC(UniMod:4)VEDYLSAILNR	3	LPC(UniMod:4)VEDYLSAILNR3	3.57032e+06	3.29975e+06	3.3356e+06
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	LPDAYER	LPDAYER	2	LPDAYER2	294334	268184	292342
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	LPDEGDPAGR	LPDEGDPAGR	2	LPDEGDPAGR2	52192.9	38977.6	39636.3
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	LPDFIAK	LPDFIAK	2	LPDFIAK2	108679	82976.1	99266.9
Q03346	Q03346	MPPB_RAT	Pmpcb	Mitochondrial-processing peptidase subunit beta	1	LPDFNQICSNMR	LPDFNQIC(UniMod:4)SNMR	2	LPDFNQIC(UniMod:4)SNMR2	11384.3	9425.33	12949.1
D3ZWS0	D3ZWS0	D3ZWS0_RAT	Scrib	Scribble planar cell polarity protein	1	LPDGFTQLR	LPDGFTQLR	2	LPDGFTQLR2	6330.34	8423.59	14078.6
Q6Q0N1	Q6Q0N1	CNDP2_RAT	Cndp2	Cytosolic non-specific dipeptidase	1	LPDGSEIPLPPILLGK	LPDGSEIPLPPILLGK	2	LPDGSEIPLPPILLGK2		7021.27	5583.82
Q5HZY0	Q5HZY0	UBXN4_RAT	Ubxn4	UBX domain-containing protein 4	1	LPDGSSFTNQFPSDAPLEEAR	LPDGSSFTNQFPSDAPLEEAR	3	LPDGSSFTNQFPSDAPLEEAR3	43899.8	45393.8	58858.7
Q499N6	Q499N6;A0A8I6AKJ0	UBXN1_RAT	Ubxn1	UBX domain-containing protein 1	0	LPDGTSLTQTFR	LPDGTSLTQTFR	2	LPDGTSLTQTFR2	26450.5	18862.5	20192.4
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	LPDGVTINYK	LPDGVTINYK	2	LPDGVTINYK2	112198	130682	175713
Q9QZK8	Q9QZK8	DNS2A_RAT	Dnase2	Deoxyribonuclease-2-alpha	1	LPDLEEVTK	LPDLEEVTK	2	LPDLEEVTK2		4696.13	
Q64194	Q64194	LICH_RAT	Lipa	Lysosomal acid lipase/cholesteryl ester hydrolase	1	LPDLLLEDLFGQK	LPDLLLEDLFGQK	2	LPDLLLEDLFGQK2	5085.66	8671.7	
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	LPDLSLDNMIGQSAIAGEEHPK	LPDLSLDNMIGQSAIAGEEHPK	3	LPDLSLDNMIGQSAIAGEEHPK3	34503.8	18779.2	30597.7
A0A8I6G6W8	A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	LPDLSLVENK	LPDLSLVENK	2	LPDLSLVENK2	24271.8	21280.1	24220.2
D3ZAE6	D3ZAE6	D3ZAE6_RAT	Vasn	Vasorin	1	LPDNELR	LPDNELR	2	LPDNELR2	39808.7	53802.9	48517.9
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	LPDPFTPNLK	LPDPFTPNLK	2	LPDPFTPNLK2	18923.1	18690.3	12404.2
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	LPDQEMGDGK	LPDQEMGDGK	2	LPDQEMGDGK2	67095.2	64895.2	78276.1
A0A8I6APP3	A0A8I6APP3	A0A8I6APP3_RAT	Plekho2	Pleckstrin homology domain containing O2	1	LPDSALSEK	LPDSALSEK	2	LPDSALSEK2	29011.6	18526.5	16025.2
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	LPDSPALAK	LPDSPALAK	1	LPDSPALAK1		2993.99	3118.13
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	LPDSPALAK	LPDSPALAK	2	LPDSPALAK2	638283	561342	603950
Q63686	Q63686	CDK16_RAT	Cdk16	Cyclin-dependent kinase 16	1	LPDTTSIFALK	LPDTTSIFALK	2	LPDTTSIFALK2	28306.9	30473.8	14549.2
Q641Y0	Q641Y0	OST48_RAT	Ddost	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit	1	LPDVYGVFQFK	LPDVYGVFQFK	2	LPDVYGVFQFK2	77321.2	72933.8	74162.4
Q499Q1	Q499Q1	Q499Q1_RAT	Rnf126	RING-type E3 ubiquitin transferase	1	LPDYICPR	LPDYIC(UniMod:4)PR	2	LPDYIC(UniMod:4)PR2	16998.2	21537	
Q03114	Q03114	CDK5_RAT	Cdk5	Cyclin-dependent kinase 5	1	LPDYKPYPMYPATTSLVNVVPK	LPDYKPYPMYPATTSLVNVVPK	3	LPDYKPYPMYPATTSLVNVVPK3	8603.09	14252	17576.1
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	LPDYSSIEIMR	LPDYSSIEIMR	2	LPDYSSIEIMR2	8067.54	5356.9	11509
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	LPEAAFLAR	LPEAAFLAR	2	LPEAAFLAR2	133245	114535	118249
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	LPEADVAVFHNFLK	LPEADVAVFHNFLK	3	LPEADVAVFHNFLK3			7350.33
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	LPEAQLYELLETAGPDR	LPEAQLYELLETAGPDR	3	LPEAQLYELLETAGPDR3	11717.5	7089.37	
A0A0G2K350	A0A0G2K350	A0A0G2K350_RAT	Napg	NSF attachment protein gamma	1	LPEAVQLIEK	LPEAVQLIEK	2	LPEAVQLIEK2	67035.6	66879.8	64908.7
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	LPECLINR	LPEC(UniMod:4)LINR	2	LPEC(UniMod:4)LINR2	29503.5	15614.9	11490.4
Q641X9	Q641X9	RM09_RAT	Mrpl9	Large ribosomal subunit protein bL9m	1	LPEDPITR	LPEDPITR	2	LPEDPITR2	17109.7	12395.7	13990.7
Q63707	Q63707	PYRD_RAT	Dhodh	Dihydroorotate dehydrogenase (quinone), mitochondrial	1	LPEDQAVINR	LPEDQAVINR	2	LPEDQAVINR2	15989.6	12890	
O35162	O35162	HSP13_RAT	Hspa13	Heat shock 70 kDa protein 13	1	LPEDQLTPGDGHHVNR	LPEDQLTPGDGHHVNR	4	LPEDQLTPGDGHHVNR4			3805.61
D4A529	D4A529	D4A529_RAT	She	Src homology 2 domain containing E	1	LPEEDDRPAAEYEQPWEWK	LPEEDDRPAAEYEQPWEWK	3	LPEEDDRPAAEYEQPWEWK3	13456	2554.84	8876.16
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	LPEEIQR	LPEEIQR	2	LPEEIQR2	309988	276648	303077
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	LPEELAEVPLIR	LPEELAEVPLIR	2	LPEELAEVPLIR2	16923.4	14253.1	26435.5
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	LPEELAEVPLIR	LPEELAEVPLIR	3	LPEELAEVPLIR3	1717.27	6530.15	5229.66
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LPEELGR	LPEELGR	2	LPEELGR2	209625	144981	188895
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LPEELGRDQNTVETLQR	LPEELGRDQNTVETLQR	3	LPEELGRDQNTVETLQR3	17974.3	15300	9773.12
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	LPEEPSSEDEQQVEK	LPEEPSSEDEQQVEK	2	LPEEPSSEDEQQVEK2	916.6	3025.94	2689.66
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	LPEFSFEK	LPEFSFEK	2	LPEFSFEK2	565170	559102	598233
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	LPEFYDEALLR	LPEFYDEALLR	2	LPEFYDEALLR2	55314.7	72335.7	67335.6
Q3T1J1	Q3T1J1	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	1	LPEGDLGK	LPEGDLGK	1	LPEGDLGK1	3730.07	1807.12	1201.39
Q3T1J1	Q3T1J1	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	1	LPEGDLGK	LPEGDLGK	2	LPEGDLGK2	996770	970286	956631
Q3T1J1	Q3T1J1	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	1	LPEGDLGKEIEQK	LPEGDLGKEIEQK	3	LPEGDLGKEIEQK3	56098.8	53126	71338.3
D3ZWS0	D3ZWS0	D3ZWS0_RAT	Scrib	Scribble planar cell polarity protein	1	LPEGIGQLK	LPEGIGQLK	2	LPEGIGQLK2	13011.7	6596.66	9125.92
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	LPEGTTYEEYLGAEYLQAVGNIR	LPEGTTYEEYLGAEYLQAVGNIR	3	LPEGTTYEEYLGAEYLQAVGNIR3	220174	267427	231967
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	LPEGTTYEEYLGAEYLQAVGNIRK	LPEGTTYEEYLGAEYLQAVGNIRK	3	LPEGTTYEEYLGAEYLQAVGNIRK3	33496.9	44686.4	72866.5
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	LPEGTTYEEYLGAEYLQAVGNIRK	LPEGTTYEEYLGAEYLQAVGNIRK	4	LPEGTTYEEYLGAEYLQAVGNIRK4	13681.5	14604.1	23885.1
D3ZP82	D3ZP82	D3ZP82_RAT	Loxl3	Lysyl oxidase homolog	1	LPEGWSQVCDK	LPEGWSQVC(UniMod:4)DK	2	LPEGWSQVC(UniMod:4)DK2	13390.6		7345.84
Q63686	Q63686	CDK16_RAT	Cdk16	Cyclin-dependent kinase 16	1	LPEGYLEK	LPEGYLEK	2	LPEGYLEK2	42814.6	51072.1	35330.5
Q99MI7	Q99MI7	UBA3_RAT	Uba3	NEDD8-activating enzyme E1 catalytic subunit	1	LPEHCIEYVR	LPEHC(UniMod:4)IEYVR	3	LPEHC(UniMod:4)IEYVR3	205378	220093	208085
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	LPEISHR	LPEISHR	2	LPEISHR2	41024.6	38656.7	31353
Q8R3Z7	Q8R3Z7	Q8R3Z7_RAT	Ehd4	EH-domain containing 4	1	LPEIYVQLQR	LPEIYVQLQR	2	LPEIYVQLQR2	70607.1	48188.8	66139.9
O08836	O08836	IGBP1_RAT	Igbp1	Immunoglobulin-binding protein 1	1	LPELFETSK	LPELFETSK	2	LPELFETSK2		8574.21	6769.42
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	LPELLLK	LPELLLK	2	LPELLLK2	36539.2	25031.7	25304
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	LPELSEAAEQDK	LPELSEAAEQDK	2	LPELSEAAEQDK2	201644	166825	180759
F1LTX4	F1LTX4	F1LTX4_RAT	Lrrn4	Leucine rich repeat neuronal 4	1	LPELSVLTLHHNR	LPELSVLTLHHNR	2	LPELSVLTLHHNR2	17271.2		21158.7
P43424	P43424	GALT_RAT	Galt	Galactose-1-phosphate uridylyltransferase	1	LPELTPAERDDLASTMK	LPELTPAERDDLASTMK	3	LPELTPAERDDLASTMK3	3226.32	8885.18	4845.64
Q6AYC2	Q6AYC2	IRGM_RAT	Irgm	Immunity-related GTPase family M protein	1	LPELVYGVK	LPELVYGVK	2	LPELVYGVK2	30377.4	13393.3	23959.7
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	LPEMAFSPDCPK	LPEMAFSPDC(UniMod:4)PK	2	LPEMAFSPDC(UniMod:4)PK2	22610.6	30834.1	34635.2
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	LPENLMEIEIPIVNYHTCQEAYTPLGK	LPENLMEIEIPIVNYHTC(UniMod:4)QEAYTPLGK	4	LPENLMEIEIPIVNYHTC(UniMod:4)QEAYTPLGK4	119195	138872	107688
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	LPENLMEIEIPIVNYHTCQEAYTPLGKK	LPENLMEIEIPIVNYHTC(UniMod:4)QEAYTPLGKK	4	LPENLMEIEIPIVNYHTC(UniMod:4)QEAYTPLGKK4	24206.1	26778	26022.2
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	LPENVLLK	LPENVLLK	2	LPENVLLK2	53440.2	54196.7	41538.1
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	LPEPIVSTDSR	LPEPIVSTDSR	2	LPEPIVSTDSR2	19523.2	25170.6	17351.6
P70483	P70483	STRN_RAT	Strn	Striatin	1	LPEQDISR	LPEQDISR	2	LPEQDISR2	494394	430396	492579
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	LPEQFEGK	LPEQFEGK	2	LPEQFEGK2	33908.5	39908.7	25805
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	LPESSHTLLR	LPESSHTLLR	2	LPESSHTLLR2	17119.8	15178.4	6373.74
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	LPESSHTLLR	LPESSHTLLR	3	LPESSHTLLR3	111821	117061	
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	LPESVER	LPESVER	2	LPESVER2	174161	165222	194918
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	LPETIDLGALYLSMK	LPETIDLGALYLSMK	2	LPETIDLGALYLSMK2	93825.9	56959	37971.8
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	LPETIDLGALYLSMK	LPETIDLGALYLSMK	3	LPETIDLGALYLSMK3	25050.4	20614.4	12575.1
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	LPETIDLGALYLSMKDPEK	LPETIDLGALYLSMKDPEK	3	LPETIDLGALYLSMKDPEK3	1.07451e+06	1.23313e+06	1.1049e+06
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	LPETSLFETEETRK	LPETSLFETEETRK	3	LPETSLFETEETRK3	68839	64807.8	50759.7
D3ZYT8	D3ZYT8	D3ZYT8_RAT	Pikfyve	1-phosphatidylinositol-3-phosphate 5-kinase	1	LPEVSGGQTNR	LPEVSGGQTNR	2	LPEVSGGQTNR2	9575.16	14141.8	6302
E9PST5	E9PST5	E9PST5_RAT	Acin1	Apoptotic chromatin condensation inducer 1	1	LPEYSQAAEEEEDQETPSR	LPEYSQAAEEEEDQETPSR	3	LPEYSQAAEEEEDQETPSR3		1767.84	1475.36
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	LPEYSSEEIMR	LPEYSSEEIMR	2	LPEYSSEEIMR2	15646.4	17902.9	19484.3
Q4V8C7	Q4V8C7	PRKRA_RAT	Prkra	Interferon-inducible double-stranded RNA-dependent protein kinase activator A	1	LPEYTLSQEGGPAHK	LPEYTLSQEGGPAHK	3	LPEYTLSQEGGPAHK3	17338.9	19418.6	15089.2
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	LPFAAAQIGNSFR	LPFAAAQIGNSFR	2	LPFAAAQIGNSFR2	3723.32	11952	5168.56
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	LPFEQAESNMK	LPFEQAESNMK	2	LPFEQAESNMK2	5998.81	5480.86	6205.8
Q5FVL8	Q5FVL8	Q5FVL8_RAT	Abcb10	ATP binding cassette subfamily B member 10	1	LPFNEGIVLDEK	LPFNEGIVLDEK	2	LPFNEGIVLDEK2	14015.5	14323.4	8837.52
O35244	O35244	PRDX6_RAT	Prdx6	Peroxiredoxin-6	1	LPFPIIDDKDR	LPFPIIDDKDR	3	LPFPIIDDKDR3	6289.21		
Q4KM35	Q4KM35	PSB10_RAT	Psmb10	Proteasome subunit beta type-10	1	LPFTALGSGQDAAVALLEDR	LPFTALGSGQDAAVALLEDR	3	LPFTALGSGQDAAVALLEDR3	179169	231469	202685
Q3B7D0	Q3B7D0	HEM6_RAT	Cpox	Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial	1	LPFTAMGISSVIHPK	LPFTAMGISSVIHPK	3	LPFTAMGISSVIHPK3	8719.57	8362.03	10260.6
Q5I0H4	Q5I0H4	TMCO1_RAT	Tmco1	Calcium load-activated calcium channel	1	LPFTPLSYIQGLSHR	LPFTPLSYIQGLSHR	3	LPFTPLSYIQGLSHR3	40297.9	24104.1	26475.1
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	LPGDHEVCK	LPGDHEVC(UniMod:4)K	2	LPGDHEVC(UniMod:4)K2	36058.5	41202	44701.4
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	LPGDIQVVPIGVGSR	LPGDIQVVPIGVGSR	2	LPGDIQVVPIGVGSR2	831238	874616	849474
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	LPGDIQVVPIGVGSR	LPGDIQVVPIGVGSR	3	LPGDIQVVPIGVGSR3	163968	159418	208541
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	LPGDPGSVGPEK	LPGDPGSVGPEK	2	LPGDPGSVGPEK2	138376	137583	129392
A0A8I5ZZN7	A0A8I5ZZN7	A0A8I5ZZN7_RAT	Tusc1	Tumor suppressor candidate 1	1	LPGDSGER	LPGDSGER	2	LPGDSGER2		39652	
Q5M9G8	Q5M9G8	DCA11_RAT	Dcaf11	DDB1- and CUL4-associated factor 11	1	LPGDSSLMTYR	LPGDSSLMTYR	2	LPGDSSLMTYR2	17146.2	15838.4	14333.7
Q5RK09	Q5RK09	EIF3G_RAT	Eif3g	Eukaryotic translation initiation factor 3 subunit G	1	LPGELEPVQAAQNK	LPGELEPVQAAQNK	2	LPGELEPVQAAQNK2	59534	60917.8	51995.4
Q5RK09	Q5RK09	EIF3G_RAT	Eif3g	Eukaryotic translation initiation factor 3 subunit G	1	LPGELEPVQAAQNK	LPGELEPVQAAQNK	3	LPGELEPVQAAQNK3		6196.57	4385.76
D3ZP82	D3ZP82	D3ZP82_RAT	Loxl3	Lysyl oxidase homolog	1	LPGFSDSNVIEVDHQLQVEEVR	LPGFSDSNVIEVDHQLQVEEVR	3	LPGFSDSNVIEVDHQLQVEEVR3			1046.46
A0A8I5ZP57	A0A8I5ZP57	A0A8I5ZP57_RAT	Pkdcc	Protein kinase domain containing, cytoplasmic	1	LPGGAAVALK	LPGGAAVALK	2	LPGGAAVALK2	84429.6	69705	64401.5
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	LPGGQLSSTVTASLHALK	LPGGQLSSTVTASLHALK	3	LPGGQLSSTVTASLHALK3	6244.61	4639.86	
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	LPGGVQSFPQFSALR	LPGGVQSFPQFSALR	3	LPGGVQSFPQFSALR3	5837.59	1662.61	
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	LPGGVVFHYR	LPGGVVFHYR	3	LPGGVVFHYR3	37643.5	37129.6	25565.9
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	LPGGVVFHYRPGSTR	LPGGVVFHYRPGSTR	3	LPGGVVFHYRPGSTR3	42304.9	51740.2	46110.6
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	LPGGVVFHYRPGSTR	LPGGVVFHYRPGSTR	4	LPGGVVFHYRPGSTR4	137724	130440	127465
D4A944	D4A944	D4A944_RAT	Snrnp40	Small nuclear ribonucleoprotein U5 subunit 40	1	LPGHAGSINEVAFHPDEPIILSASSDK	LPGHAGSINEVAFHPDEPIILSASSDK	4	LPGHAGSINEVAFHPDEPIILSASSDK4	13487.5		
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	LPGINCGPDFTPSFANLGR	LPGINC(UniMod:4)GPDFTPSFANLGR	3	LPGINC(UniMod:4)GPDFTPSFANLGR3	13493.7	9256.15	9412.25
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	LPGINCGPDFTPSFANLGRPTLSSR	LPGINC(UniMod:4)GPDFTPSFANLGRPTLSSR	3	LPGINC(UniMod:4)GPDFTPSFANLGRPTLSSR3	76040	91872.6	104656
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	LPGISDHSLIK	LPGISDHSLIK	3	LPGISDHSLIK3	26316.1	14672.6	14826.6
Q9EQP5	Q9EQP5	PRELP_RAT	Prelp	Prolargin	1	LPGLAFLYMDK	LPGLAFLYMDK	2	LPGLAFLYMDK2	2383.48	6471.28	8933.98
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	LPGLIDVHVHLR	LPGLIDVHVHLR	3	LPGLIDVHVHLR3	13498.8	7915.91	10162.1
Q6P7S1	Q6P7S1	ASAH1_RAT	Asah1	Acid ceramidase	1	LPGLIGSIPGPFGEEMR	LPGLIGSIPGPFGEEMR	2	LPGLIGSIPGPFGEEMR2		7359.48	9825.89
A0A0G2JVY4	A0A0G2JVY4	A0A0G2JVY4_RAT	Tmem63a	Transmembrane protein 63a	1	LPGLILYTFR	LPGLILYTFR	2	LPGLILYTFR2	3877.15		4758.04
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	LPGLLMTIIR	LPGLLMTIIR	2	LPGLLMTIIR2	6133.23	6200.61	6124.2
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	LPGQDNLVK	LPGQDNLVK	2	LPGQDNLVK2	49976.4	44963	53594.9
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	LPGQPPASMGR	LPGQPPASMGR	2	LPGQPPASMGR2	67391.8	55842	65823.3
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	LPGQPTIEGYLYTQEK	LPGQPTIEGYLYTQEK	2	LPGQPTIEGYLYTQEK2	43640.8	25818.4	35096.9
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	LPGQPTIEGYLYTQEK	LPGQPTIEGYLYTQEK	3	LPGQPTIEGYLYTQEK3	21915.6	26511.2	20894
Q6AYS6	Q6AYS6	SNX17_RAT	Snx17	Sorting nexin-17	1	LPGQQLR	LPGQQLR	2	LPGQQLR2	35840.5	36761.1	27271
D4A1B2	D4A1B2	D4A1B2_RAT	Arpin	Arpin	1	LPGTWDPTTHQGGSGVLLEGELVDVSR	LPGTWDPTTHQGGSGVLLEGELVDVSR	3	LPGTWDPTTHQGGSGVLLEGELVDVSR3	41986.6	26478.8	23232.6
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	LPGTYVVVLMEETQR	LPGTYVVVLMEETQR	2	LPGTYVVVLMEETQR2	121162	96896.7	82731.9
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	LPGTYVVVLMEETQR	LPGTYVVVLMEETQR	3	LPGTYVVVLMEETQR3	158063	123182	146675
Q9R0E0	Q9R0E0	CEGT_RAT	Ugcg	Ceramide glucosyltransferase	1	LPGVSLLKPLK	LPGVSLLKPLK	3	LPGVSLLKPLK3	8391.09	7097.27	2669.04
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	LPGYAEVLLK	LPGYAEVLLK	2	LPGYAEVLLK2	71280.4	89322.9	61975.8
B0K025	F1M0N4;B0K025	OSTC_RAT	Ostc	Oligosaccharyltransferase complex subunit OSTC	0	LPGYLMG	LPGYLMG	1	LPGYLMG1	31572.2	18482.7	37121.8
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	LPHAGTQVR	LPHAGTQVR	2	LPHAGTQVR2	243531	143012	212385
A0A0G2K0W3	A0A0G2K0W3	A0A0G2K0W3_RAT	Ttyh3	Protein tweety homolog	1	LPHFDLR	LPHFDLR	2	LPHFDLR2	11930.2	14800.5	19879.5
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	LPHYLQK	LPHYLQK	2	LPHYLQK2	145827	136745	107339
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	LPIADREACQR	LPIADREAC(UniMod:4)QR	3	LPIADREAC(UniMod:4)QR3	136811	113572	142321
D3ZSN4	D3ZSN4	D3ZSN4_RAT	Zfp330	Zinc finger protein 330	1	LPICAQCGK	LPIC(UniMod:4)AQC(UniMod:4)GK	2	LPIC(UniMod:4)AQC(UniMod:4)GK2	33904.1	34725.8	37331.4
Q9NQR8	Q9NQR8	NDUF4_RAT	Ndufaf4	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4	1	LPIGDQFDK	LPIGDQFDK	2	LPIGDQFDK2	14662.7	18213.8	9076.23
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	LPIGDVATQYFADR	LPIGDVATQYFADR	2	LPIGDVATQYFADR2	115215	145862	129539
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	LPIGDVATQYFADR	LPIGDVATQYFADR	3	LPIGDVATQYFADR3	33916.2	29877.3	27357.2
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	LPIGDVATQYFADRDMFCAGR	LPIGDVATQYFADRDMFC(UniMod:4)AGR	3	LPIGDVATQYFADRDMFC(UniMod:4)AGR3	762810	776322	777074
Q7TSA0	Q7TSA0	MIRO2_RAT	Rhot2	Mitochondrial Rho GTPase 2	1	LPIILVGNK	LPIILVGNK	2	LPIILVGNK2	23603.3	20118.7	26531.4
A0A8I5ZM79	A0A8I5ZM79	A0A8I5ZM79_RAT	Psmd7	Proteasome 26S subunit, non-ATPase 7	1	LPINHHIIYQLQDVFNLLPDASLQEFVK	LPINHHIIYQLQDVFNLLPDASLQEFVK	4	LPINHHIIYQLQDVFNLLPDASLQEFVK4	30134.2	21239.5	20366.1
Q66HG9	Q66HG9	MAVS_RAT	Mavs	Mitochondrial antiviral-signaling protein	1	LPINSVYTGIVPSK	LPINSVYTGIVPSK	2	LPINSVYTGIVPSK2	42774.2	45778.5	36871.8
Q66HG9	Q66HG9	MAVS_RAT	Mavs	Mitochondrial antiviral-signaling protein	1	LPINSVYTGIVPSK	LPINSVYTGIVPSK	3	LPINSVYTGIVPSK3	4246.31	5809.89	5090.06
P85971	P85971	6PGL_RAT	Pgls	6-phosphogluconolactonase	1	LPIPDSQVLTIDPALPVEDAAEDYAR	LPIPDSQVLTIDPALPVEDAAEDYAR	3	LPIPDSQVLTIDPALPVEDAAEDYAR3	9697.01	27810.4	21975.5
Q8K3V3	Q8K3V3	AGRG1_RAT	Adgrg1	Adhesion G-protein coupled receptor G1	1	LPISSGSTSSSR	LPISSGSTSSSR	2	LPISSGSTSSSR2	48695.2	52019.8	28136
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LPISVRR	LPISVRR	2	LPISVRR2	12878.8	19793.3	11047.7
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	LPITLNK	LPITLNK	2	LPITLNK2	80155.8		77695.9
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	LPITSLEK	LPITSLEK	1	LPITSLEK1	51327.4	36270.1	32004.7
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	LPITSLEK	LPITSLEK	2	LPITSLEK2	31272.5	26588.4	25220.3
Q6AY61	Q6AY61	PRS23_RAT	Prss23	Serine protease 23	1	LPIVLPQSTLK	LPIVLPQSTLK	2	LPIVLPQSTLK2	3068.79	3546.46	
D3ZLZ7	D3ZLZ7	IMDH1_RAT	Impdh1	Inosine-5'-monophosphate dehydrogenase 1	1	LPIVNDQDELVAIIAR	LPIVNDQDELVAIIAR	2	LPIVNDQDELVAIIAR2	1454.59		5633.08
D3ZLZ7	D3ZLZ7	IMDH1_RAT	Impdh1	Inosine-5'-monophosphate dehydrogenase 1	1	LPIVNDQDELVAIIAR	LPIVNDQDELVAIIAR	3	LPIVNDQDELVAIIAR3	3651.89	3089.7	4170.92
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	LPIVNESDELVAIIAR	LPIVNESDELVAIIAR	2	LPIVNESDELVAIIAR2	5410.8	6385.23	4026.07
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	LPIVNESDELVAIIAR	LPIVNESDELVAIIAR	3	LPIVNESDELVAIIAR3	26260.3	35524.3	19163.3
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	LPIVPSLQR	LPIVPSLQR	2	LPIVPSLQR2	24111.7	29146.8	18969.2
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	LPKPELCPPVLYTLMTR	LPKPELC(UniMod:4)PPVLYTLMTR	3	LPKPELC(UniMod:4)PPVLYTLMTR3	36954.5	25256.2	29321.9
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	LPKPWDPDDAETVVWLAQDLEPLK	LPKPWDPDDAETVVWLAQDLEPLK	3	LPKPWDPDDAETVVWLAQDLEPLK3	14957.9	19300.4	17768.9
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	LPLAAQGK	LPLAAQGK	2	LPLAAQGK2	85198.4	86899.2	68920.2
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	LPLAEEEK	LPLAEEEK	2	LPLAEEEK2	460475	431660	466992
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LPLAQSADYGTNLQTVQLFMK	LPLAQSADYGTNLQTVQLFMK	3	LPLAQSADYGTNLQTVQLFMK3	16848.1	22456.3	16829.1
Q9WVC0	Q9WVC0	SEPT7_RAT	Septin7	Septin-7	1	LPLAVVGSNTIIEVNGK	LPLAVVGSNTIIEVNGK	2	LPLAVVGSNTIIEVNGK2	5045.05	3624.48	4711.36
A0A8I6GJ42	A0A8I6GJ42	A0A8I6GJ42_RAT	Helz	Helicase with zinc finger	1	LPLCEMHYALDR	LPLC(UniMod:4)EMHYALDR	3	LPLC(UniMod:4)EMHYALDR3		4107.55	3674.48
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	LPLDSVK	LPLDSVK	2	LPLDSVK2	100148	98294.4	108379
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	LPLDVLGR	LPLDVLGR	2	LPLDVLGR2	24911.8	17457.2	20916
D4ABM5	D4ABM5	D4ABM5_RAT	Mrps34	Mitochondrial ribosomal protein S34	1	LPLFGLGR	LPLFGLGR	2	LPLFGLGR2	20709.9	27780.3	22709.3
Q5FWU3	Q5FWU3	ATG9A_RAT	Atg9a	Autophagy-related protein 9A	1	LPLGGWAEDGQPASR	LPLGGWAEDGQPASR	2	LPLGGWAEDGQPASR2		4154.69	5089.66
D3ZZA8	D3ZZA8	D3ZZA8_RAT	Sec24a	SEC24 homolog A, COPII coat complex component	1	LPLGLLLHPFK	LPLGLLLHPFK	3	LPLGLLLHPFK3	914.327		3420.42
D3ZW15	D3ZW15	D3ZW15_RAT	Sec24b	SEC24 homolog B, COPII coat complex component	1	LPLGLLLHPFR	LPLGLLLHPFR	2	LPLGLLLHPFR2	4611.31	2477.01	
D3ZW15	D3ZW15	D3ZW15_RAT	Sec24b	SEC24 homolog B, COPII coat complex component	1	LPLGLLLHPFR	LPLGLLLHPFR	3	LPLGLLLHPFR3	10360.4	5295.68	3146.77
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	LPLGLLYVHHTYVPAPPCTTFQSCAADMR	LPLGLLYVHHTYVPAPPC(UniMod:4)TTFQSC(UniMod:4)AADMR	4	LPLGLLYVHHTYVPAPPC(UniMod:4)TTFQSC(UniMod:4)AADMR4	114423	145505	121326
A0A096MJF9	A0A096MJF9	A0A096MJF9_RAT	Tmem132e	Transmembrane protein 132E	1	LPLHIELSDAR	LPLHIELSDAR	3	LPLHIELSDAR3	24440.8	28994.2	20761
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	LPLHLYDTPGSTYNLQILTR	LPLHLYDTPGSTYNLQILTR	3	LPLHLYDTPGSTYNLQILTR3	4873.73	8880.96	7705.58
B0BN86	B0BN86	TMM11_RAT	Tmem11	Transmembrane protein 11, mitochondrial	1	LPLHTLTSSTPVVLVR	LPLHTLTSSTPVVLVR	2	LPLHTLTSSTPVVLVR2	2389.23	2663.72	3811.09
B0BN86	B0BN86	TMM11_RAT	Tmem11	Transmembrane protein 11, mitochondrial	1	LPLHTLTSSTPVVLVR	LPLHTLTSSTPVVLVR	3	LPLHTLTSSTPVVLVR3	54690.9	42914	53441.4
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	LPLKPNDLK	LPLKPNDLK	2	LPLKPNDLK2	13575.2	21915.3	14669.1
A0A8I6GIL4	A0A8I6GIL4	A0A8I6GIL4_RAT	Tmem87a	Transmembrane protein 87A	1	LPLLGEK	LPLLGEK	2	LPLLGEK2	68317.5	81913.3	62515
A0A8I6G4R8	A0A8I6G4R8	A0A8I6G4R8_RAT	Hdac5	Histone deacetylase	1	LPLLGPYDSR	LPLLGPYDSR	2	LPLLGPYDSR2	7375.15	3878.64	
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	LPLLLSR	LPLLLSR	2	LPLLLSR2	227878	211148	194967
Q3MIB4	Q3MIB4	LONP2_RAT	Lonp2	Lon protease homolog 2, peroxisomal	1	LPLLLTHESVLLPGSTMR	LPLLLTHESVLLPGSTMR	3	LPLLLTHESVLLPGSTMR3	8661.89	21202.7	17259.6
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	LPLLLVANAGTAAVGHTDK	LPLLLVANAGTAAVGHTDK	3	LPLLLVANAGTAAVGHTDK3	10998.8	5435.71	4510.2
G3V9T7	G3V9T7	GET3_RAT	Get3	ATPase Get3	1	LPLLPHEVR	LPLLPHEVR	2	LPLLPHEVR2	72220.3	34001.1	30383.9
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	LPLMECVQMTQDVQK	LPLMEC(UniMod:4)VQMTQDVQK	2	LPLMEC(UniMod:4)VQMTQDVQK2	17398.7	15335.1	16721.7
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	LPLMECVQMTQDVQK	LPLMEC(UniMod:4)VQMTQDVQK	3	LPLMEC(UniMod:4)VQMTQDVQK3	97315.1	94745.2	116556
P30835	P47858;P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	0	LPLMECVQVTK	LPLMEC(UniMod:4)VQVTK	2	LPLMEC(UniMod:4)VQVTK2	91618.1	95592.7	80839.4
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	LPLNFLSGEK	LPLNFLSGEK	2	LPLNFLSGEK2	12860.2	9289.8	9581.08
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	LPLNIEEAK	LPLNIEEAK	2	LPLNIEEAK2	7160.86	7695.95	5368.32
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	LPLNIEEAKDR	LPLNIEEAKDR	3	LPLNIEEAKDR3	14452.1	17516.9	14516.7
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	LPLNKFPGFAK	LPLNKFPGFAK	3	LPLNKFPGFAK3	8166.59	9825.91	11975.9
D4ADV8	D4ADV8	D4ADV8_RAT	Dvl3	Dishevelled segment polarity protein 3	1	LPLPAER	LPLPAER	2	LPLPAER2	14517.1	14645.6	5681.97
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	LPLPQNEVIADTSSTK	LPLPQNEVIADTSSTK	2	LPLPQNEVIADTSSTK2	28597.6	32169.6	21328.6
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	LPLPQNEVIADTSSTK	LPLPQNEVIADTSSTK	3	LPLPQNEVIADTSSTK3	24224.6	24775	23617.7
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	LPLQANVYPMSTMAYIQDAAHR	LPLQANVYPMSTMAYIQDAAHR	3	LPLQANVYPMSTMAYIQDAAHR3	23495.5	28702.4	38586.9
P62630	P62632;P62630;F1M6C2;M0R757;A0A8I6AQI9	EF1A1_RAT	Eef1a1	Elongation factor 1-alpha 1	0	LPLQDVYK	LPLQDVYK	2	LPLQDVYK2	337730	285373	273728
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	LPLQLDDAIRPEVEGEEDGR	LPLQLDDAIRPEVEGEEDGR	3	LPLQLDDAIRPEVEGEEDGR3	45538.5	35337	45452.5
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	LPLSPSLLVK	LPLSPSLLVK	2	LPLSPSLLVK2	9829.59	12039.1	7057.32
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	LPLTISPVAR	LPLTISPVAR	2	LPLTISPVAR2	40735.6	17201.6	14884.5
F1LNX8	F1LNX8	F1LNX8_RAT	Cmahp	Cytidine monophosphate-N-acetylneuraminic acid hydroxylase	1	LPLTPPNWK	LPLTPPNWK	2	LPLTPPNWK2	19611.2	19176.4	14404.9
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	LPLTVEEIASFGEGNR	LPLTVEEIASFGEGNR	2	LPLTVEEIASFGEGNR2	37517.7	40939	47077.2
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	LPLTVEEIASFGEGNR	LPLTVEEIASFGEGNR	3	LPLTVEEIASFGEGNR3	37892.5	28273.5	45852.4
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	LPLTYPAPNGDPILR	LPLTYPAPNGDPILR	2	LPLTYPAPNGDPILR2	141942	150182	141519
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	LPLTYPAPNGDPILR	LPLTYPAPNGDPILR	3	LPLTYPAPNGDPILR3	4273.47	6577.48	6849.34
P51111	P51111	HD_RAT	Htt	Huntingtin	1	LPLVNSYTR	LPLVNSYTR	2	LPLVNSYTR2	59605.3	53527.6	67114.6
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	LPLVSLR	LPLVSLR	2	LPLVSLR2	90883.3	77068.6	84449.3
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	LPLVTPHTQCR	LPLVTPHTQC(UniMod:4)R	2	LPLVTPHTQC(UniMod:4)R2	14060.6	4697.59	8387.69
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	LPLVTPHTQCR	LPLVTPHTQC(UniMod:4)R	3	LPLVTPHTQC(UniMod:4)R3	146298	105489	135370
A0A8I5ZYB9	A0A8I5ZYB9	A0A8I5ZYB9_RAT	Lrrc32	Leucine rich repeat containing 32	1	LPLVVSLDLSGNSLHGSLVER	LPLVVSLDLSGNSLHGSLVER	3	LPLVVSLDLSGNSLHGSLVER3	23965.7	41806.9	24315.8
A0A8I5ZNY0	A0A8I5ZNY0	A0A8I5ZNY0_RAT	Avl9	AVL9 cell migration associated	1	LPLYGLLQAK	LPLYGLLQAK	2	LPLYGLLQAK2	6523.33	7026.96	
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	LPMGMTAENLAAK	LPMGMTAENLAAK	2	LPMGMTAENLAAK2	73611.8	60506	89401.6
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	LPMGSQCSVDLESTSGEK	LPMGSQC(UniMod:4)SVDLESTSGEK	2	LPMGSQC(UniMod:4)SVDLESTSGEK2	49653.4	37726.9	59111.7
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	LPMGSQCSVDLESTSGEK	LPMGSQC(UniMod:4)SVDLESTSGEK	3	LPMGSQC(UniMod:4)SVDLESTSGEK3	18945	20938.2	21622.5
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	LPMLYPEVIQQVSAPVVASTTQEKPK	LPMLYPEVIQQVSAPVVASTTQEKPK	3	LPMLYPEVIQQVSAPVVASTTQEKPK3	9879.48	13891.3	10749
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	LPMNLLPK	LPMNLLPK	2	LPMNLLPK2	23944.8	26445	25292.8
A0A8I6ACK9	A0A8I6A0D0;A0A8I6ACK9;A0A8I5ZW97	A0A8I6ACK9_RAT	Abcg3l3	ATP-binding cassette, subfamily G (WHITE), member 3-like 3	0	LPMTITR	LPMTITR	2	LPMTITR2	43576.1	43073.9	41706.2
D3ZYS7	D3ZYS7	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	1	LPNFGFVVFDDSEPVQK	LPNFGFVVFDDSEPVQK	2	LPNFGFVVFDDSEPVQK2	23845.3	28261.5	34483.7
D3ZYS7	D3ZYS7	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	1	LPNFGFVVFDDSEPVQK	LPNFGFVVFDDSEPVQK	3	LPNFGFVVFDDSEPVQK3	23681.7	17202.8	28827.8
F7F5P9	F7F5P9	F7F5P9_RAT	G3bp2	G3BP stress granule assembly factor 2	1	LPNFGFVVFDDSEPVQR	LPNFGFVVFDDSEPVQR	3	LPNFGFVVFDDSEPVQR3	35033.6	33364.7	34403.7
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	LPNFGSHVLTAAEMEAFR	LPNFGSHVLTAAEMEAFR	3	LPNFGSHVLTAAEMEAFR3	17622	20621.7	22003.5
Q3B8N7	Q3B8N7	T22D4_RAT	Tsc22d4	TSC22 domain family protein 4	1	LPNGEPNPDPGGR	LPNGEPNPDPGGR	2	LPNGEPNPDPGGR2	30048.3	21782.3	18810.3
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	LPNGLVIASLENYAPLSR	LPNGLVIASLENYAPLSR	2	LPNGLVIASLENYAPLSR2	61367.5	36154.4	57104.6
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	LPNGLVIASLENYAPLSR	LPNGLVIASLENYAPLSR	3	LPNGLVIASLENYAPLSR3	34393.8	35476.7	25193.4
F7EYC4	F7EYC4	F7EYC4_RAT	Tom1	Target of myb1 membrane trafficking protein	1	LPNLASPSAEGPPRPCPGAAPR	LPNLASPSAEGPPRPC(UniMod:4)PGAAPR	3	LPNLASPSAEGPPRPC(UniMod:4)PGAAPR3	13661.7	13007	14124.7
Q6AXV4	Q6AXV4	SAM50_RAT	Samm50	Sorting and assembly machinery component 50 homolog	1	LPNLLGR	LPNLLGR	2	LPNLLGR2	137743	113971	108385
Q62844	Q62844	FYN_RAT	Fyn	Tyrosine-protein kinase Fyn	1	LPNLVDMAAQVAAGMAYIER	LPNLVDMAAQVAAGMAYIER	3	LPNLVDMAAQVAAGMAYIER3	2272.41		780.492
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	LPNNHIGISFIPR	LPNNHIGISFIPR	3	LPNNHIGISFIPR3	14031.2		3150.17
P59622	P59622	SLAP1_RAT	Sla	Src-like-adapter	1	LPNNWYYISPR	LPNNWYYISPR	2	LPNNWYYISPR2	6254.46	6321.56	6329.82
F7EKI5	F7EKI5	F7EKI5_RAT	Pcdh18	Protocadherin 18	1	LPNPSAIR	LPNPSAIR	2	LPNPSAIR2	35667.3	21564.3	27390.3
D3ZM09	D3ZM09	D3ZM09_RAT	Sars2	serine--tRNA ligase	1	LPNQTHPDTPVGDESQAR	LPNQTHPDTPVGDESQAR	3	LPNQTHPDTPVGDESQAR3	2803.63	3617.38	5372.19
D3ZKE1	D3ZKE1	D3ZKE1_RAT	Uvrag	UV radiation resistance associated	1	LPNSEDFQAK	LPNSEDFQAK	2	LPNSEDFQAK2	16956.3		5867.74
A0A8I6GFX3	A0A8I6GFX3	A0A8I6GFX3_RAT	Tut4	RNA uridylyltransferase	1	LPNSPMK	LPNSPMK	2	LPNSPMK2			5296.59
Q8R491	Q8R491;Q8R3Z7	EHD3_RAT	Ehd3	EH domain-containing protein 3	0	LPNSVLGK	LPNSVLGK	2	LPNSVLGK2	118223	96785.2	111547
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	LPNSVVR	LPNSVVR	2	LPNSVVR2	53223.6	42981.7	41916
Q641Z6	Q641Z6	EHD1_RAT	Ehd1	EH domain-containing protein 1	1	LPNTVLGK	LPNTVLGK	2	LPNTVLGK2	11044.5	12804.5	12628.3
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	LPNTYPNSPSPGPGGLGGSVHYATMAR	LPNTYPNSPSPGPGGLGGSVHYATMAR	3	LPNTYPNSPSPGPGGLGGSVHYATMAR3	17373.9	19030.1	21754
Q32PX2	Q32PX2	AIMP2_RAT	Aimp2	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2	1	LPNVHSK	LPNVHSK	2	LPNVHSK2	29151.6	19463.7	
B1WBN7	B1WBN7	B1WBN7_RAT	Fam20c	FAM20C	1	LPPAAEPVDHAPR	LPPAAEPVDHAPR	3	LPPAAEPVDHAPR3	154842	115805	104356
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	LPPEEGSLAVITK	LPPEEGSLAVITK	2	LPPEEGSLAVITK2	60152	56372	60151.6
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	LPPEFSPLIIK	LPPEFSPLIIK	2	LPPEFSPLIIK2	98620.8	111222	91865.9
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	LPPGEYIVVPSTFEPNK	LPPGEYIVVPSTFEPNK	2	LPPGEYIVVPSTFEPNK2	11979.9	11508.1	17905.6
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	LPPGEYIVVPSTFEPNK	LPPGEYIVVPSTFEPNK	3	LPPGEYIVVPSTFEPNK3	29344	21425	33676.6
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	LPPGEYIVVPSTFEPNKEGDFLLR	LPPGEYIVVPSTFEPNKEGDFLLR	3	LPPGEYIVVPSTFEPNKEGDFLLR3	113539	82209.8	104454
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	LPPGEYIVVPSTFEPNKEGDFLLR	LPPGEYIVVPSTFEPNKEGDFLLR	4	LPPGEYIVVPSTFEPNKEGDFLLR4	12347.8	14628.5	25825.1
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	LPPGEYVLVPSTFEPHK	LPPGEYVLVPSTFEPHK	2	LPPGEYVLVPSTFEPHK2	69899	52958.6	45680.9
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	LPPGEYVLVPSTFEPHK	LPPGEYVLVPSTFEPHK	3	LPPGEYVLVPSTFEPHK3	1.09089e+06	1.00505e+06	1.04133e+06
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	LPPGEYVLVPSTFEPHK	LPPGEYVLVPSTFEPHK	4	LPPGEYVLVPSTFEPHK4	11114.9	9717.15	11814
Q3KRD5	Q3KRD5	TOM34_RAT	Tomm34	Mitochondrial import receptor subunit TOM34	1	LPPIPVVPVSAQK	LPPIPVVPVSAQK	2	LPPIPVVPVSAQK2	3106.74	3456.26	3912.61
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	LPPKPQFLQR	LPPKPQFLQR	3	LPPKPQFLQR3	38136.9	47705.6	36405.6
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	LPPLALLK	LPPLALLK	1	LPPLALLK1	8593.99	11643.9	8009.05
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	LPPLALLK	LPPLALLK	2	LPPLALLK2	5.81847e+06	5.10716e+06	5.47396e+06
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	LPPLIGQK	LPPLIGQK	2	LPPLIGQK2	98459.1	119131	68536
F1LM81	F1LM81	TM1L1_RAT	Tom1l1	TOM1-like protein 1	1	LPPLPSNHPVLK	LPPLPSNHPVLK	3	LPPLPSNHPVLK3	23902.9	24225.8	16606.9
Q3MIE4	Q3MIE4	VAT1_RAT	Vat1	Synaptic vesicle membrane protein VAT-1 homolog	1	LPPLPVTPGMEGAGVVVAVGEGVSDR	LPPLPVTPGMEGAGVVVAVGEGVSDR	3	LPPLPVTPGMEGAGVVVAVGEGVSDR3	28993.2	32490.6	45751.3
Q3MIE4	Q3MIE4	VAT1_RAT	Vat1	Synaptic vesicle membrane protein VAT-1 homolog	1	LPPLPVTPGMEGAGVVVAVGEGVSDRK	LPPLPVTPGMEGAGVVVAVGEGVSDRK	3	LPPLPVTPGMEGAGVVVAVGEGVSDRK3	44634.6	45234.6	33969.4
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	LPPNYSIHSAEK	LPPNYSIHSAEK	3	LPPNYSIHSAEK3	18881.9	30502.4	22461.1
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	LPPPKPLPGTLK	LPPPKPLPGTLK	3	LPPPKPLPGTLK3	192194	170065	180988
Q71RP1	Q71RP1	HPSE_RAT	Hpse	Heparanase	1	LPPPMFSRPVDK	LPPPMFSRPVDK	3	LPPPMFSRPVDK3	166038	179506	210004
Q5XI81	Q5XI81	FXR1_RAT	Fxr1	RNA-binding protein FXR1	1	LPPPPDIK	LPPPPDIK	2	LPPPPDIK2	48945	37260.9	39331.2
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	LPPQEWEK	LPPQEWEK	2	LPPQEWEK2	15128.1	51825.1	
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	LPPQQIEK	LPPQQIEK	2	LPPQQIEK2	213316	148753	219843
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	LPPTLCTWLK	LPPTLC(UniMod:4)TWLK	2	LPPTLC(UniMod:4)TWLK2	147754	171887	155422
A1L134	A1L134	AUP1_RAT	Aup1	Lipid droplet-regulating VLDL assembly factor AUP1	1	LPPTPLLLFPEEEATNGR	LPPTPLLLFPEEEATNGR	3	LPPTPLLLFPEEEATNGR3	24341.2	12860.5	25105.9
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	LPPVLAIQLK	LPPVLAIQLK	2	LPPVLAIQLK2	17957.3	11216.9	15750.2
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	LPPVLNLQELEEYRDK	LPPVLNLQELEEYRDK	3	LPPVLNLQELEEYRDK3	26107.5	43860.5	33345.2
B2RYI0	B2RYI0	WDR91_RAT	Wdr91	WD repeat-containing protein 91	1	LPPYVSSMDR	LPPYVSSMDR	2	LPPYVSSMDR2	28110.7	23423.9	15649.2
A0A8I6ACY9	A0A8I6ACY9	A0A8I6ACY9_RAT	Vps37b	VPS37B subunit of ESCRT-I	1	LPQAGVPLPPR	LPQAGVPLPPR	2	LPQAGVPLPPR2	9729.78	6580.65	
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	LPQDMSGFQK	LPQDMSGFQK	2	LPQDMSGFQK2	1.40084e+06	1.42755e+06	1.44099e+06
D3ZFJ3	D3ZFJ3	3BP1_RAT	Sh3bp1	SH3 domain-binding protein 1	1	LPQENFNNLR	LPQENFNNLR	2	LPQENFNNLR2	31230	32179.4	31930.9
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	LPQFPFSIDQEGNIYVTQPLDR	LPQFPFSIDQEGNIYVTQPLDR	3	LPQFPFSIDQEGNIYVTQPLDR3	4337	5430.86	8783.49
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	LPQFPFSIDQEGNIYVTQPLDREEK	LPQFPFSIDQEGNIYVTQPLDREEK	4	LPQFPFSIDQEGNIYVTQPLDREEK4	9759.45	9001.76	6379.07
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	LPQFVQSADLEVQER	LPQFVQSADLEVQER	2	LPQFVQSADLEVQER2	17269.3	21060.7	13804.6
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	LPQFVQSADLEVQER	LPQFVQSADLEVQER	3	LPQFVQSADLEVQER3	37434.3	48702.9	44901.7
Q3B8N7	Q3B8N7	T22D4_RAT	Tsc22d4	TSC22 domain family protein 4	1	LPQGLGEPYR	LPQGLGEPYR	2	LPQGLGEPYR2	40450.4	60325	39436.7
Q3B8N7	Q3B8N7	T22D4_RAT	Tsc22d4	TSC22 domain family protein 4	1	LPQGLGEPYRR	LPQGLGEPYRR	3	LPQGLGEPYRR3	114839	104322	157458
D4A4P4	D4A4P4	D4A4P4_RAT	Flad1	FAD synthase	1	LPQGSLIPYLPDAVEK	LPQGSLIPYLPDAVEK	2	LPQGSLIPYLPDAVEK2	8256.58	10120	6513.53
D4A4P4	D4A4P4	D4A4P4_RAT	Flad1	FAD synthase	1	LPQGSLIPYLPDAVEK	LPQGSLIPYLPDAVEK	3	LPQGSLIPYLPDAVEK3		31133.5	29208.3
M0R4M1	M0R4M1	M0R4M1_RAT	Nlrc5	NLR family, CARD domain containing 5	1	LPQIPQLSQLR	LPQIPQLSQLR	2	LPQIPQLSQLR2	27694	20433.3	34734.6
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	LPQLEALLPPR	LPQLEALLPPR	2	LPQLEALLPPR2	27041.8	25852.2	38511.5
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	LPQLPITNFSR	LPQLPITNFSR	2	LPQLPITNFSR2	8.08152e+06	7.02703e+06	9.14939e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	LPQLPITNFSR	LPQLPITNFSR	3	LPQLPITNFSR3	6151.78	8668.82	8880.36
Q9WUD9	Q9WUD9	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	1	LPQLVDMSAQIASGMAYVER	LPQLVDMSAQIASGMAYVER	3	LPQLVDMSAQIASGMAYVER3	95834.3	94257.6	117138
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	LPQMETEGAEEGKEPQK	LPQMETEGAEEGKEPQK	3	LPQMETEGAEEGKEPQK3	25047.7	18585.4	11495.1
A0A8I6A3Q1;A0A8I6AT35	A0A8I6A3Q1;A0A8I6AT35	A0A8I6A3Q1_RAT;A0A8I6AT35_RAT	ENSRNOG00000067007;LOC679539	UBC core domain-containing protein	0	LPQPPEGQCYSN	LPQPPEGQC(UniMod:4)YSN	2	LPQPPEGQC(UniMod:4)YSN2	4406.28	3887.61	2763.99
Q6PCU8	Q6PCU8	NDUV3_RAT	Ndufv3	NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial	1	LPQPSSGR	LPQPSSGR	2	LPQPSSGR2	73225.5	68605.2	70828.2
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	LPQPVQVDPVTHCK	LPQPVQVDPVTHC(UniMod:4)K	2	LPQPVQVDPVTHC(UniMod:4)K2	1819.18	3985.75	4654.59
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	LPQPVQVDPVTHCK	LPQPVQVDPVTHC(UniMod:4)K	3	LPQPVQVDPVTHC(UniMod:4)K3	87206.3	69774	85267.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LPQQIHDYLNASDWER	LPQQIHDYLNASDWER	3	LPQQIHDYLNASDWER3	931751	1.15209e+06	1.15459e+06
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	LPQVSPADSGEYVCR	LPQVSPADSGEYVC(UniMod:4)R	2	LPQVSPADSGEYVC(UniMod:4)R2	33355.4	30813.1	22238.3
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	LPQVSPADSGEYVCR	LPQVSPADSGEYVC(UniMod:4)R	3	LPQVSPADSGEYVC(UniMod:4)R3	6609.47		
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	LPRPEGCPDEIYVIMTECWNNNVNQRPSFR	LPRPEGC(UniMod:4)PDEIYVIMTEC(UniMod:4)WNNNVNQRPSFR	4	LPRPEGC(UniMod:4)PDEIYVIMTEC(UniMod:4)WNNNVNQRPSFR4	9141.96	8457.29	6869.11
P16036	P16036	S25A3_RAT	Slc25a3	Solute carrier family 25 member 3	1	LPRPPPPEMPESLK	LPRPPPPEMPESLK	3	LPRPPPPEMPESLK3	87893.3	84362.8	62107.6
P16036	P16036	S25A3_RAT	Slc25a3	Solute carrier family 25 member 3	1	LPRPPPPEMPESLKK	LPRPPPPEMPESLKK	3	LPRPPPPEMPESLKK3	19372.6	14651.9	6510.31
P16036	P16036	S25A3_RAT	Slc25a3	Solute carrier family 25 member 3	1	LPRPPPPEMPESLKK	LPRPPPPEMPESLKK	4	LPRPPPPEMPESLKK4	41859.8	67735.3	55946.6
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	LPRPSSLLDK	LPRPSSLLDK	2	LPRPSSLLDK2	27197.4	19111.4	14081.4
A0A0G2JUC9	A0A0G2JUC9	A0A0G2JUC9_RAT	Herc2	HECT-type E3 ubiquitin transferase	1	LPRYSCK	LPRYSC(UniMod:4)K	2	LPRYSC(UniMod:4)K2	8213.25		
D4A3T0	D4A3T0	D4A3T0_RAT	Sos1	SOS Ras/Rac guanine nucleotide exchange factor 1	1	LPSADVYR	LPSADVYR	2	LPSADVYR2	5904.98	9659.88	6525.69
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	LPSAEPHQASFSSAEPR	LPSAEPHQASFSSAEPR	3	LPSAEPHQASFSSAEPR3	4368.01	3484.09	8585.19
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	LPSATDMQSSCCILSPELALPTGSR	LPSATDMQSSC(UniMod:4)C(UniMod:4)ILSPELALPTGSR	3	LPSATDMQSSC(UniMod:4)C(UniMod:4)ILSPELALPTGSR3	15832.3	16415	25402.3
F1LTX4	F1LTX4	F1LTX4_RAT	Lrrn4	Leucine rich repeat neuronal 4	1	LPSCLPR	LPSC(UniMod:4)LPR	2	LPSC(UniMod:4)LPR2	114281	122792	113938
E9PU15	E9PU15	E9PU15_RAT	Dicer1	Endoribonuclease Dicer	1	LPSDPFTHLAPK	LPSDPFTHLAPK	3	LPSDPFTHLAPK3	4216.51	2429.76	8430.01
Q09325	Q09325	MGAT1_RAT	Mgat1	Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	1	LPSDSALGDDPASLTR	LPSDSALGDDPASLTR	2	LPSDSALGDDPASLTR2	1837.43	1967.79	
Q00438	Q00438	PTBP1_RAT	Ptbp1	Polypyrimidine tract-binding protein 1	1	LPSDVTEGEVISLGLPFGK	LPSDVTEGEVISLGLPFGK	3	LPSDVTEGEVISLGLPFGK3	4132.39	2970.57	5451.9
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	LPSDVVEESAR	LPSDVVEESAR	2	LPSDVVEESAR2	22203.7	22222	14969.4
P04182	P04182	OAT_RAT	Oat	Ornithine aminotransferase, mitochondrial	1	LPSDVVTAVR	LPSDVVTAVR	2	LPSDVVTAVR2	5001.89	11641.9	
A0A8I5ZTB8	A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	LPSEDSLSSASTSHSENSVHTK	LPSEDSLSSASTSHSENSVHTK	4	LPSEDSLSSASTSHSENSVHTK4	3520.72	6513.3	6020.15
B5DF65	B5DF65	B5DF65_RAT	Blvrb	Biliverdin reductase B	1	LPSEGPQPAHVVVGDVLQAGDVDK	LPSEGPQPAHVVVGDVLQAGDVDK	3	LPSEGPQPAHVVVGDVLQAGDVDK3	15451.7	14634.9	14935.2
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	LPSEMNAQGDK	LPSEMNAQGDK	2	LPSEMNAQGDK2	269796	208487	217334
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	LPSFELLHK	LPSFELLHK	2	LPSFELLHK2	15655.3	6615.08	9472.62
B5DF86	B5DF86	B5DF86_RAT	Cog8	Conserved oligomeric Golgi complex subunit 8	1	LPSFQQSCR	LPSFQQSC(UniMod:4)R	2	LPSFQQSC(UniMod:4)R2	35813.4	18574.5	24269.1
B0BNB9	B0BNB9	B0BNB9_RAT	Htra2	HtrA serine peptidase 2	1	LPSGDTYEAMVTAVDPVADIATLR	LPSGDTYEAMVTAVDPVADIATLR	3	LPSGDTYEAMVTAVDPVADIATLR3	20711.3	20682.4	20271.1
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	LPSGSDHVMLK	LPSGSDHVMLK	2	LPSGSDHVMLK2	161631	104140	117355
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	LPSGSDHVMLK	LPSGSDHVMLK	3	LPSGSDHVMLK3	862653	1.0792e+06	1.17361e+06
F1M8V2	F1M8V2	F1M8V2_RAT	Ube4b	Ubiquitin conjugation factor E4	1	LPSGTIMDR	LPSGTIMDR	2	LPSGTIMDR2	20985.2	14414.1	
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	LPSHTESVTSNR	LPSHTESVTSNR	3	LPSHTESVTSNR3	19112.6	19330.1	19718.6
Q5M890	Q5M890	Q5M890_RAT	Apon	Apolipoprotein N	1	LPSIDLVR	LPSIDLVR	1	LPSIDLVR1	3971.17	4179.92	
Q5M890	Q5M890	Q5M890_RAT	Apon	Apolipoprotein N	1	LPSIDLVR	LPSIDLVR	2	LPSIDLVR2	1.05429e+07	1.02712e+07	1.01661e+07
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	LPSKPSSPGSPSPMFR	LPSKPSSPGSPSPMFR	3	LPSKPSSPGSPSPMFR3	3494.48		8897.19
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	LPSLFNPGDPDAFHQK	LPSLFNPGDPDAFHQK	3	LPSLFNPGDPDAFHQK3	22806.1	23209.1	19690.2
P86182	P86182	CCD22_RAT	Ccdc22	Coiled-coil domain-containing protein 22	1	LPSQEDPR	LPSQEDPR	2	LPSQEDPR2	22449	15568.2	19732.5
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	LPSSEEEESLDINIEGAK	LPSSEEEESLDINIEGAK	3	LPSSEEEESLDINIEGAK3	54070.1	53110.4	1.64884e+07
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	LPSSEEEESLDINIEGAKHK	LPSSEEEESLDINIEGAKHK	3	LPSSEEEESLDINIEGAKHK3	5247.38	3966.81	3304.34
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	LPSSEEEESLDINIEGAKHK	LPSSEEEESLDINIEGAKHK	4	LPSSEEEESLDINIEGAKHK4		28757.8	17285.7
P0C5W1	P0C5W1	MAP1S_RAT	Map1s	Microtubule-associated protein 1S	1	LPSSEGLR	LPSSEGLR	2	LPSSEGLR2	105289	117349	119997
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	LPSSIEYSDLSR	LPSSIEYSDLSR	2	LPSSIEYSDLSR2	17060.5	17560.6	16566
A0A8I6AGS4	A0A8I6AGS4	A0A8I6AGS4_RAT	Abi3bp	ABI family member 3 binding protein	1	LPSSIMLEISDALK	LPSSIMLEISDALK	2	LPSSIMLEISDALK2	11216.9		9339.56
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	LPSSSEQVILDLK	LPSSSEQVILDLK	2	LPSSSEQVILDLK2	7778.13	16478.9	7362.17
B0BN19	B0BN19	B0BN19_RAT	Rab22a	RAB22A, member RAS oncogene family	1	LPSTDASPASGGK	LPSTDASPASGGK	2	LPSTDASPASGGK2	4525.21		
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	LPSVPAVGSVPQDPVTHMSITER	LPSVPAVGSVPQDPVTHMSITER	3	LPSVPAVGSVPQDPVTHMSITER3	11468.7	13173	9120.13
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	LPSVSDENENQLAGDGPALLTTSDGAMGR	LPSVSDENENQLAGDGPALLTTSDGAMGR	3	LPSVSDENENQLAGDGPALLTTSDGAMGR3	16844.6	31665.2	24034
A0A8I6ACP7	A0A8I6ACP7	A0A8I6ACP7_RAT	Slc35b3	Solute carrier family 35 member B3	1	LPSVYSVIK	LPSVYSVIK	2	LPSVYSVIK2	28445.1	35955.1	26974.3
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	LPSYGLCER	LPSYGLC(UniMod:4)ER	2	LPSYGLC(UniMod:4)ER2	24553.1	44429.2	28080.4
D3ZLN7	D3ZLN7	D3ZLN7_RAT	Commd2	COMM domain containing 2	1	LPSYHSLEWR	LPSYHSLEWR	3	LPSYHSLEWR3	14032.1	11891.6	5786.48
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	LPTAIIPQR	LPTAIIPQR	2	LPTAIIPQR2	50645	45968.1	48743.1
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	LPTASTCMNLLK	LPTASTC(UniMod:4)MNLLK	2	LPTASTC(UniMod:4)MNLLK2	61006.5	59159.1	47729.3
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	LPTCDGSTSK	LPTC(UniMod:4)DGSTSK	2	LPTC(UniMod:4)DGSTSK2	61489.3	59154.7	45210.1
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	LPTDLPADTGILHLSK	LPTDLPADTGILHLSK	2	LPTDLPADTGILHLSK2	123314	94493.9	96521.7
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	LPTDLPADTGILHLSK	LPTDLPADTGILHLSK	3	LPTDLPADTGILHLSK3	603498	541066	631131
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	LPTDPSSDEPVFHISHIDR	LPTDPSSDEPVFHISHIDR	4	LPTDPSSDEPVFHISHIDR4	5526.81	5933.27	6069.72
B5DFD1	B5DFD1	B5DFD1_RAT	Nudcd1	NudC domain-containing protein 1	1	LPTDVTACDNR	LPTDVTAC(UniMod:4)DNR	2	LPTDVTAC(UniMod:4)DNR2	32083.1	14194.7	17898.6
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	LPTFDLASHHHVK	LPTFDLASHHHVK	3	LPTFDLASHHHVK3	1371.51	1656.79	5557.14
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	LPTGCAEQTMVLLAPTLTASR	LPTGC(UniMod:4)AEQTMVLLAPTLTASR	3	LPTGC(UniMod:4)AEQTMVLLAPTLTASR3	17227.3	12787.1	12580.1
D3ZMQ3	D3ZMQ3	D3ZMQ3_RAT	Itga4	Integrin subunit alpha 4	1	LPTGVCYGMPSDLR	LPTGVC(UniMod:4)YGMPSDLR	2	LPTGVC(UniMod:4)YGMPSDLR2	3446.71	660.286	981.562
F7FPK8	F7FPK8	F7FPK8_RAT	Lman2	Lectin, mannose-binding 2	1	LPTGYYFGASAGTGDLSDNHDLISIK	LPTGYYFGASAGTGDLSDNHDLISIK	3	LPTGYYFGASAGTGDLSDNHDLISIK3	55542.3	53368	27112.9
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LPTIMDFR	LPTIMDFR	2	LPTIMDFR2	1.55151e+06	2.2609e+06	1.98119e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LPTIMDFRK	LPTIMDFRK	2	LPTIMDFRK2	53349.3	76859.9	57242.9
Q62760	Q62760;A0A8I5ZZX1	TOM20_RAT	Tomm20	Mitochondrial import receptor subunit TOM20 homolog	0	LPTISQR	LPTISQR	2	LPTISQR2	120853	99997.7	98267.4
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	LPTQLAWEALEQR	LPTQLAWEALEQR	2	LPTQLAWEALEQR2	65212.1	65462.5	48707.2
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	LPTQLAWEALEQR	LPTQLAWEALEQR	3	LPTQLAWEALEQR3	125403	101532	107077
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	LPTSALVNLSHGSR	LPTSALVNLSHGSR	3	LPTSALVNLSHGSR3	8536.1	12913.7	5361.11
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	LPTSHTCFNVLLLPEYSSK	LPTSHTC(UniMod:4)FNVLLLPEYSSK	3	LPTSHTC(UniMod:4)FNVLLLPEYSSK3	13120.9	5983.72	10168.7
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	LPTSVLLPFK	LPTSVLLPFK	2	LPTSVLLPFK2	33734.3	40859.5	25356.3
O55043	O55043	ARHG7_RAT	Arhgef7	Rho guanine nucleotide exchange factor 7	1	LPTTGMTITK	LPTTGMTITK	2	LPTTGMTITK2	22229.3	19245.3	16524
F1M171	F1M171	F1M171_RAT	Leg1	Similar to RIKEN cDNA 2310057J18	1	LPTTLNR	LPTTLNR	2	LPTTLNR2	1.03843e+06	1.02461e+06	966859
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	LPTVNNQLIYCHSNSK	LPTVNNQLIYC(UniMod:4)HSNSK	3	LPTVNNQLIYC(UniMod:4)HSNSK3	15569.8	15974.8	13560.4
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	LPTYCNTDYDMVPLAVPAVALDSSTDR	LPTYC(UniMod:4)NTDYDMVPLAVPAVALDSSTDR	4	LPTYC(UniMod:4)NTDYDMVPLAVPAVALDSSTDR4	135018	127253	134902
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	LPTYHFCR	LPTYHFC(UniMod:4)R	2	LPTYHFC(UniMod:4)R2	12607	10735.8	15338
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	LPVALDPGSK	LPVALDPGSK	2	LPVALDPGSK2	479108	446079	408276
P01883	P01883	IGHD_RAT		Ig delta chain C region (Fragment)	1	LPVALSPSLDTYTCVVEHEASQTK	LPVALSPSLDTYTC(UniMod:4)VVEHEASQTK	3	LPVALSPSLDTYTC(UniMod:4)VVEHEASQTK3	12609.1	2340.19	7125.63
A2RRU1	A2RRU1	GYS1_RAT	Gys1	Glycogen [starch] synthase, muscle	1	LPVATIFTTHATLLGR	LPVATIFTTHATLLGR	3	LPVATIFTTHATLLGR3	7812.57	4835.52	12076.2
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	LPVDEEAFVIDFKPR	LPVDEEAFVIDFKPR	3	LPVDEEAFVIDFKPR3	55467.6	44053.1	58796.7
Q6P7Q1	Q6P7Q1	BABA2_RAT	Babam2	BRISC and BRCA1-A complex member 2	1	LPVDFSNIPTYLLK	LPVDFSNIPTYLLK	2	LPVDFSNIPTYLLK2	17017.6	9576.5	12567.4
P30427	P30427	PLEC_RAT	Plec	Plectin	1	LPVDVAYQR	LPVDVAYQR	2	LPVDVAYQR2	5798	6296.59	
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	LPVEEAYK	LPVEEAYK	2	LPVEEAYK2	54349.6	42248.5	37317.7
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	LPVEILGR	LPVEILGR	2	LPVEILGR2	274356	270523	294650
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	LPVESSMGQGVVSR	LPVESSMGQGVVSR	2	LPVESSMGQGVVSR2		3399.49	
P30427	P30427	PLEC_RAT	Plec	Plectin	1	LPVEVAYK	LPVEVAYK	2	LPVEVAYK2	12731.2		
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	LPVFCQLILK	LPVFC(UniMod:4)QLILK	2	LPVFC(UniMod:4)QLILK2	131382	123242	107730
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	LPVGFTFSFPCR	LPVGFTFSFPC(UniMod:4)R	2	LPVGFTFSFPC(UniMod:4)R2	13465.3	11651.7	18457
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	LPVGGDRK	LPVGGDRK	2	LPVGGDRK2	261151	295416	240666
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	LPVGGFADLMGSNGPQK	LPVGGFADLMGSNGPQK	2	LPVGGFADLMGSNGPQK2	4874.39	5450.21	9794.84
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	LPVGGFADLMGSNGPQK	LPVGGFADLMGSNGPQK	3	LPVGGFADLMGSNGPQK3	5138.38	5162.64	10420.2
B4F767	B4F767	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	1	LPVGGFAELIGSNGPQK	LPVGGFAELIGSNGPQK	2	LPVGGFAELIGSNGPQK2	3922.3	4547.19	
B4F767	B4F767	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	1	LPVGGFAELIGSNGPQK	LPVGGFAELIGSNGPQK	3	LPVGGFAELIGSNGPQK3	14685.2	17690.2	11063
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	LPVGQALPK	LPVGQALPK	2	LPVGQALPK2	38144.7	37120.7	32156.1
Q64232	Q64232	TECR_RAT	Tecr	Very-long-chain enoyl-CoA reductase	1	LPVGTTATLYFR	LPVGTTATLYFR	2	LPVGTTATLYFR2	97568.5	112795	96415.2
P80385	P80385	AAKG1_RAT	Prkag1	5'-AMP-activated protein kinase subunit gamma-1	1	LPVIDPESGNTLYILTHK	LPVIDPESGNTLYILTHK	3	LPVIDPESGNTLYILTHK3	42675.5	49213.1	39714.9
Q4V8H8	Q4V8H8	EHD2_RAT	Ehd2	EH domain-containing protein 2	1	LPVIFAK	LPVIFAK	2	LPVIFAK2	10500.6	22440.1	24810
D3ZDP7	D3ZDP7	D3ZDP7_RAT	Nyap1	Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1	1	LPVLCHSK	LPVLC(UniMod:4)HSK	2	LPVLC(UniMod:4)HSK2	82372.2	87967.8	91659.5
Q9QZK5	Q9QZK5	HTRA1_RAT	Htra1	Serine protease HTRA1	1	LPVLLLGR	LPVLLLGR	2	LPVLLLGR2	23558.7	14590.7	25760
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	LPVLTCTLQLR	LPVLTC(UniMod:4)TLQLR	2	LPVLTC(UniMod:4)TLQLR2	59690.7	54550.6	54329.2
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	LPVPASAPIPFFHR	LPVPASAPIPFFHR	2	LPVPASAPIPFFHR2	73336.5	79035	72396
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	LPVPASAPIPFFHR	LPVPASAPIPFFHR	3	LPVPASAPIPFFHR3	966468	1.11459e+06	1.11277e+06
Q704S8	Q704S8	CACP_RAT	Crat	Carnitine O-acetyltransferase	1	LPVPPLQQSLDHYLK	LPVPPLQQSLDHYLK	3	LPVPPLQQSLDHYLK3	32636.1	27067.9	25077
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	LPVQECLSYATCAQCR	LPVQEC(UniMod:4)LSYATC(UniMod:4)AQC(UniMod:4)R	2	LPVQEC(UniMod:4)LSYATC(UniMod:4)AQC(UniMod:4)R2	1338.41		
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	LPVQECLSYATCAQCR	LPVQEC(UniMod:4)LSYATC(UniMod:4)AQC(UniMod:4)R	3	LPVQEC(UniMod:4)LSYATC(UniMod:4)AQC(UniMod:4)R3	15300.8	16107.7	11751.7
A0A8I5ZV26	A0A8I5ZV26	A0A8I5ZV26_RAT	Stom	Stomatin	1	LPVQLQR	LPVQLQR	2	LPVQLQR2	6.59905e+06	6.07999e+06	6.82518e+06
Q9WVJ4	Q9WVJ4	SYJ2B_RAT	Synj2bp	Synaptojanin-2-binding protein	1	LPVQNGPIVHR	LPVQNGPIVHR	3	LPVQNGPIVHR3	5009.78	6621.48	5201.11
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	LPVSEGIFLVK	LPVSEGIFLVK	2	LPVSEGIFLVK2	35047.9	34400.6	24914.1
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	LPVSEGIFLVKDPNDRR	LPVSEGIFLVKDPNDRR	4	LPVSEGIFLVKDPNDRR4	7472.31	12862.1	10381.8
A0A8I5ZUS1	A0A8I5ZUS1	A0A8I5ZUS1_RAT	Map3k4	Mitogen activated protein kinase kinase kinase 4	1	LPVSMPMPIAR	LPVSMPMPIAR	2	LPVSMPMPIAR2	11363.4	9233.51	5194.63
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	LPVSSSTSNLHVDREQDVITCYEK	LPVSSSTSNLHVDREQDVITC(UniMod:4)YEK	4	LPVSSSTSNLHVDREQDVITC(UniMod:4)YEK4	2534.32	3637.88	2972.97
P83006	P83006	PAFA2_RAT	Pafah2	Platelet-activating factor acetylhydrolase 2, cytoplasmic	1	LPVSWNGPFK	LPVSWNGPFK	2	LPVSWNGPFK2	3578.32	7142.83	6978.63
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	LPVTINK	LPVTINK	2	LPVTINK2	56137.8	51217	57413.6
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	LPVTNEMVHNLVAIELAYINTK	LPVTNEMVHNLVAIELAYINTK	3	LPVTNEMVHNLVAIELAYINTK3	4095.32	4602.53	4797.15
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	LPVVIGGLLDVDCSEDVIK	LPVVIGGLLDVDC(UniMod:4)SEDVIK	3	LPVVIGGLLDVDC(UniMod:4)SEDVIK3	90177.5	80449.6	74082.3
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	LPVVLDGGK	LPVVLDGGK	1	LPVVLDGGK1	7121.63	5505.17	8705.34
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	LPVVLDGGK	LPVVLDGGK	2	LPVVLDGGK2	46268.8	38670.3	3.32837e+06
Q5FWY5	Q5FWY5	AIP_RAT	Aip	AH receptor-interacting protein	1	LPVWETIVR	LPVWETIVR	2	LPVWETIVR2		5158.25	4873.7
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	LPWAELVCPR	LPWAELVC(UniMod:4)PR	2	LPWAELVC(UniMod:4)PR2	16964.8	30772.9	32314
Q9QWE9	Q9QWE9	GGT5_RAT	Ggt5	Glutathione hydrolase 5 proenzyme	1	LPWAQLFQPTIALLR	LPWAQLFQPTIALLR	2	LPWAQLFQPTIALLR2	6136.97		
Q6AY30	Q6AY30	SCPDL_RAT	Sccpdh	Saccharopine dehydrogenase-like oxidoreductase	1	LPWAVAGR	LPWAVAGR	2	LPWAVAGR2	350064	323863	334567
Q5PPG7	Q5PPG7	EIF2D_RAT	Eif2d	Eukaryotic translation initiation factor 2D	1	LPWDSLLTR	LPWDSLLTR	2	LPWDSLLTR2	14216.5	12653.2	
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	LPYDVTPEQALSHEEVK	LPYDVTPEQALSHEEVK	2	LPYDVTPEQALSHEEVK2	3794.45	4776.03	1852.99
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	LPYDVTPEQALSHEEVK	LPYDVTPEQALSHEEVK	3	LPYDVTPEQALSHEEVK3	39248	40531.6	32586.5
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	LPYDVTTEQALTYPEVK	LPYDVTTEQALTYPEVK	3	LPYDVTTEQALTYPEVK3	5671.49	11624.8	10302.7
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	LPYGGQCRPCPCPEGPGSQR	LPYGGQC(UniMod:4)RPC(UniMod:4)PC(UniMod:4)PEGPGSQR	3	LPYGGQC(UniMod:4)RPC(UniMod:4)PC(UniMod:4)PEGPGSQR3	10846.7	14323.7	8958.03
Q99372	Q99372	ELN_RAT	Eln	Elastin	1	LPYGVAGAGGK	LPYGVAGAGGK	2	LPYGVAGAGGK2	11099.3	5242.85	3178.27
D3ZQL1	D3ZQL1	D3ZQL1_RAT	Emc7	ER membrane protein complex subunit 7	1	LPYPLQMK	LPYPLQMK	2	LPYPLQMK2	55328.4	78884.6	79741.3
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	LPYQCPK	LPYQC(UniMod:4)PK	1	LPYQC(UniMod:4)PK1	4449.01	2509.07	3789.74
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	LPYQCPK	LPYQC(UniMod:4)PK	2	LPYQC(UniMod:4)PK2	1.40757e+06	1.15098e+06	1.00497e+06
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	LPYQGNATMLVVLMEK	LPYQGNATMLVVLMEK	3	LPYQGNATMLVVLMEK3	2424.72	6950.04	5612.76
A0A0G2K931	A0A0G2K931	A0A0G2K931_RAT	Psat1	Phosphoserine aminotransferase	1	LPYSVLLEIQK	LPYSVLLEIQK	2	LPYSVLLEIQK2	3911.03	5903.18	3266.07
P01026	P01026	CO3_RAT	C3	Complement C3	1	LPYSVVR	LPYSVVR	2	LPYSVVR2	4.25947e+06	4.15482e+06	3.67471e+06
O54715	O54715	VAS1_RAT	Atp6ap1	V-type proton ATPase subunit S1	1	LPYTASSGLMAPR	LPYTASSGLMAPR	2	LPYTASSGLMAPR2	19898.8	9189.17	12369.6
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	LQAAGNAVK	LQAAGNAVK	1	LQAAGNAVK1	7237.64	5367.05	7594.37
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	LQAAGNAVK	LQAAGNAVK	2	LQAAGNAVK2	2.45072e+06	2.19493e+06	2.29101e+06
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	LQAAGNAVKR	LQAAGNAVKR	2	LQAAGNAVKR2	7352.08		
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	LQAALISR	LQAALISR	2	LQAALISR2	115538	104243	116264
A0A0G2K6C7	A0A0G2K6C7	A0A0G2K6C7_RAT	Trim5	Tripartite motif-containing 5	1	LQAALQK	LQAALQK	2	LQAALQK2	44078.2	44146.4	43276.1
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	LQAALVQILEER	LQAALVQILEER	2	LQAALVQILEER2	6901.15	2243.98	7209.13
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	LQAALVQILEERDEVLAQER	LQAALVQILEERDEVLAQER	3	LQAALVQILEERDEVLAQER3	39206.1	67747.3	79447.7
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	LQAANAEDIK	LQAANAEDIK	2	LQAANAEDIK2	284838	266341	219959
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LQAAYAGDK	LQAAYAGDK	1	LQAAYAGDK1	7558.74	7288.3	5385.25
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LQAAYAGDK	LQAAYAGDK	2	LQAAYAGDK2	1.25319e+06	1.37412e+06	1.47301e+06
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LQAAYAGDKADDIQK	LQAAYAGDKADDIQK	2	LQAAYAGDKADDIQK2	2093.51		
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LQAAYAGDKADDIQK	LQAAYAGDKADDIQK	3	LQAAYAGDKADDIQK3	15473	14478.4	
P02770	P02770	ALBU_RAT	Alb	Albumin	1	LQACCDK	LQAC(UniMod:4)C(UniMod:4)DK	2	LQAC(UniMod:4)C(UniMod:4)DK2			24525.6
P02770	P02770	ALBU_RAT	Alb	Albumin	1	LQACCDKPVLQK	LQAC(UniMod:4)C(UniMod:4)DKPVLQK	2	LQAC(UniMod:4)C(UniMod:4)DKPVLQK2	1.20082e+06	1.12057e+06	929072
P02770	P02770	ALBU_RAT	Alb	Albumin	1	LQACCDKPVLQK	LQAC(UniMod:4)C(UniMod:4)DKPVLQK	3	LQAC(UniMod:4)C(UniMod:4)DKPVLQK3	3.0653e+07	3.20751e+07	2.99902e+07
G3V7P2	G3V7P2	G3V7P2_RAT	Fgl2	Fibrinogen-like 2	1	LQADEHPDPGGNGAETAEDNR	LQADEHPDPGGNGAETAEDNR	3	LQADEHPDPGGNGAETAEDNR3	144384	129096	113883
B0BNL6	B0BNL6	ARRD1_RAT	Arrdc1	Arrestin domain-containing protein 1	1	LQADIENQSGK	LQADIENQSGK	2	LQADIENQSGK2	8444.41	12241.2	5580.01
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	LQADLLELR	LQADLLELR	2	LQADLLELR2	36626.8	36559.6	32178.6
Q5XIL2	Q5XIL2	P4K2B_RAT	Pi4k2b	Phosphatidylinositol 4-kinase type 2-beta	1	LQADQGAAVLR	LQADQGAAVLR	2	LQADQGAAVLR2	5531.06	5535.2	
Q5RKI1	Q5RKI1	IF4A2_RAT	Eif4a2	Eukaryotic initiation factor 4A-II	1	LQAEAPHIVVGTPGR	LQAEAPHIVVGTPGR	3	LQAEAPHIVVGTPGR3	19962.1	11578.8	12242.6
P30427	P30427	PLEC_RAT	Plec	Plectin	1	LQAEEVAQQK	LQAEEVAQQK	2	LQAEEVAQQK2	6302.89	5205.03	3274.56
Q10758	Q10758	K2C8_RAT	Krt8	Keratin, type II cytoskeletal 8	1	LQAEIDALK	LQAEIDALK	2	LQAEIDALK2	29410.8		5942.94
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	LQAEIFQAR	LQAEIFQAR	2	LQAEIFQAR2	57673.3	70999.3	69686
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	LQAEIFQARIKGWFEPLVEDMQR	LQAEIFQARIKGWFEPLVEDMQR	4	LQAEIFQARIKGWFEPLVEDMQR4	14313.6	21449.9	15896.6
Q2M2R8	Q2M2R8	PEX5_RAT	Pex5	Peroxisomal targeting signal 1 receptor	1	LQAELEEMAK	LQAELEEMAK	2	LQAELEEMAK2	4229.93		3765.62
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	LQAENDASK	LQAENDASK	1	LQAENDASK1			4110.07
Q9Z272	Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	1	LQAENLQLR	LQAENLQLR	2	LQAENLQLR2	22336.9	31688.9	19513.3
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	LQAENTALQK	LQAENTALQK	2	LQAENTALQK2	29814.1	32946.2	25699.7
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	LQAESFCQR	LQAESFC(UniMod:4)QR	2	LQAESFC(UniMod:4)QR2	108324	96729.8	84553
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	LQAETELINR	LQAETELINR	2	LQAETELINR2	119536	145925	136109
Q6IE70	Q6IE70	PAN2_RAT	Pan2	PAN2-PAN3 deadenylation complex catalytic subunit Pan2	1	LQAEVAFK	LQAEVAFK	2	LQAEVAFK2	6388.43	10156.8	4336.19
Q64194	Q64194	LICH_RAT	Lipa	Lysosomal acid lipase/cholesteryl ester hydrolase	1	LQAFDWGSSDK	LQAFDWGSSDK	2	LQAFDWGSSDK2	28535.9	21369.9	31543.3
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LQAFLQDLDDFK	LQAFLQDLDDFK	2	LQAFLQDLDDFK2	72224.4	76728.4	70675.5
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	LQAFSAAIESCNK	LQAFSAAIESC(UniMod:4)NK	2	LQAFSAAIESC(UniMod:4)NK2		6380.05	11829.9
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	LQAGDAPSVGGSCR	LQAGDAPSVGGSC(UniMod:4)R	2	LQAGDAPSVGGSC(UniMod:4)R2	34229.9	27895.6	27485.6
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	LQAGTVFINTYNK	LQAGTVFINTYNK	2	LQAGTVFINTYNK2	3777.54	4912.82	4557.65
E9PSP1	E9PSP1	E9PSP1_RAT	Pltp	Phospholipid transfer protein	1	LQAISSPR	LQAISSPR	2	LQAISSPR2	2.22829e+06	2.36232e+06	2.19288e+06
Q5U2N0	Q5U2N0	PYRG2_RAT	Ctps2	CTP synthase 2	1	LQAISWAR	LQAISWAR	2	LQAISWAR2	16889.5	31597.3	25368.2
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LQALDTGWNELHK	LQALDTGWNELHK	2	LQALDTGWNELHK2	63278.7	55942.3	58952.1
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LQALDTGWNELHK	LQALDTGWNELHK	3	LQALDTGWNELHK3	536424	618097	582302
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	LQALLEAR	LQALLEAR	2	LQALLEAR2	17441.2	27845.9	17004.6
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	LQALLGDNEK	LQALLGDNEK	2	LQALLGDNEK2	14053.8	15120.1	
Q9Z1K9	Q9Z1K9	ADA17_RAT	Adam17	Disintegrin and metalloproteinase domain-containing protein 17	1	LQALQPAAMMPPVSAAPK	LQALQPAAMMPPVSAAPK	2	LQALQPAAMMPPVSAAPK2	11346.8	6344.31	7277.46
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	LQALQTDYK	LQALQTDYK	2	LQALQTDYK2	42191.4	56532.2	56089.9
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	LQALSTADGGDYSCTAR	LQALSTADGGDYSC(UniMod:4)TAR	2	LQALSTADGGDYSC(UniMod:4)TAR2	3434.68	3346.09	3455.58
D3ZXY2	D3ZXY2	D3ZXY2_RAT	Pdzd8	PDZ domain containing 8	1	LQALTLLMIHYK	LQALTLLMIHYK	3	LQALTLLMIHYK3		5020.56	
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	LQAMLSK	LQAMLSK	2	LQAMLSK2	47074.5	43846.9	36112.4
A0A0G2K2T1	A0A0G2K2T1	A0A0G2K2T1_RAT	Txlnb	Taxilin beta	1	LQAPEEK	LQAPEEK	2	LQAPEEK2	1569.46		
Q4QQS7	Q4QQS7	Q4QQS7_RAT	Umps	Uridine 5'-monophosphate synthase	1	LQAQGIR	LQAQGIR	2	LQAQGIR2	12158.5	14659.5	9029.94
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	LQAQLESEK	LQAQLESEK	2	LQAQLESEK2	17619.4	10293.4	27805.3
O88321	O88321	O88321_RAT	Psmd4	26S proteasome non-ATPase regulatory subunit 4	1	LQAQQDAVNIVCHSK	LQAQQDAVNIVC(UniMod:4)HSK	2	LQAQQDAVNIVC(UniMod:4)HSK2	1309.84	3755.37	7976.96
O88321	O88321	O88321_RAT	Psmd4	26S proteasome non-ATPase regulatory subunit 4	1	LQAQQDAVNIVCHSK	LQAQQDAVNIVC(UniMod:4)HSK	3	LQAQQDAVNIVC(UniMod:4)HSK3	109706	114967	107483
D4A584	D4A584	D4A584_RAT	Fes	Tyrosine-protein kinase	1	LQAQQELLQSK	LQAQQELLQSK	2	LQAQQELLQSK2	6406.16		7775.02
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	LQAQVEHSHSSQQK	LQAQVEHSHSSQQK	4	LQAQVEHSHSSQQK4			9133.56
A0A8I5ZVY6	A0A8I5ZVY6	A0A8I5ZVY6_RAT	Rint1	RAD50 interactor 1	1	LQASDELLTESK	LQASDELLTESK	2	LQASDELLTESK2	15328.7	8629.81	14821.5
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	LQASENDLLNK	LQASENDLLNK	2	LQASENDLLNK2	35072.7	40362.3	36826
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	LQASENDLLNKR	LQASENDLLNKR	3	LQASENDLLNKR3	39141.3	25850	32789.9
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	LQASIEASR	LQASIEASR	2	LQASIEASR2	171456	171337	200932
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	LQASQAEITSLQQAR	LQASQAEITSLQQAR	2	LQASQAEITSLQQAR2	2735.46	2707.97	5267.08
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	LQASQAEITSLQQAR	LQASQAEITSLQQAR	3	LQASQAEITSLQQAR3	4837.06	4332.02	2095.84
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	LQATGEKEEMEELQAYNR	LQATGEKEEMEELQAYNR	3	LQATGEKEEMEELQAYNR3	11013.6	10203	17086
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	LQATLDMQSGIIHAAEEK	LQATLDMQSGIIHAAEEK	3	LQATLDMQSGIIHAAEEK3	28720.4	28590.1	36738.2
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	LQATLDMQSGIIHAAEEKDWK	LQATLDMQSGIIHAAEEKDWK	3	LQATLDMQSGIIHAAEEKDWK3	20644.3	17537.4	9583.15
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	LQATLDMQSGIIHAAEEKDWK	LQATLDMQSGIIHAAEEKDWK	4	LQATLDMQSGIIHAAEEKDWK4	39995	41803.6	27516.3
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	LQATVETDDHIR	LQATVETDDHIR	3	LQATVETDDHIR3	10993	8153.05	12918.5
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	LQAVESLCSAQHSHVIESNDLSEEK	LQAVESLC(UniMod:4)SAQHSHVIESNDLSEEK	3	LQAVESLC(UniMod:4)SAQHSHVIESNDLSEEK3	13854.7	7618.49	5168.55
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	LQAVESLCSAQHSHVIESNDLSEEK	LQAVESLC(UniMod:4)SAQHSHVIESNDLSEEK	4	LQAVESLC(UniMod:4)SAQHSHVIESNDLSEEK4	24840.8	22064.5	19963.8
Q9WU49	Q9WU49	CHSP1_RAT	Carhsp1	Calcium-regulated heat stable protein 1	1	LQAVEVVITHLAPGTK	LQAVEVVITHLAPGTK	3	LQAVEVVITHLAPGTK3	4288.12	13500.1	7185.95
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	LQAVQAR	LQAVQAR	2	LQAVQAR2	24107.7	13356.2	21984.4
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	LQAVVSEQPNKDVVEQMK	LQAVVSEQPNKDVVEQMK	3	LQAVVSEQPNKDVVEQMK3	43657.2	27857.9	33771.5
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	LQAWLTR	LQAWLTR	2	LQAWLTR2	68342.6	70342.8	36618.4
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	LQAWMTR	LQAWMTR	2	LQAWMTR2	132954	176381	158618
Q64244	Q64244	CD38_RAT	Cd38	ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1	1	LQAWVMHDIK	LQAWVMHDIK	2	LQAWVMHDIK2	58498	48383.8	52200.3
Q64244	Q64244	CD38_RAT	Cd38	ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1	1	LQAWVMHDIK	LQAWVMHDIK	3	LQAWVMHDIK3	140799	133154	143656
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	LQAYTSVAK	LQAYTSVAK	2	LQAYTSVAK2	47845.7	52496.8	49024.8
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	LQAYTSVSK	LQAYTSVSK	2	LQAYTSVSK2	127082	152483	130252
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	LQCELYSSR	LQC(UniMod:4)ELYSSR	2	LQC(UniMod:4)ELYSSR2	9542.42	6360.83	8516.2
A0A8I5Y224	A0A8I5Y224	A0A8I5Y224_RAT	Adam9	ADAM metallopeptidase domain 9	1	LQCENVQEMPVFGIVPAIIQTPSR	LQC(UniMod:4)ENVQEMPVFGIVPAIIQTPSR	3	LQC(UniMod:4)ENVQEMPVFGIVPAIIQTPSR3	11469.5		12291.3
Q10473	Q10473	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	1	LQCKPFSWYLENIYPDSQIPR	LQC(UniMod:4)KPFSWYLENIYPDSQIPR	3	LQC(UniMod:4)KPFSWYLENIYPDSQIPR3	76080.3	79690.4	82398.5
D4A758	D4A758	D4A758_RAT	Lrrc8b	Leucine rich repeat containing 8 VRAC subunit B	1	LQCLLLGR	LQC(UniMod:4)LLLGR	2	LQC(UniMod:4)LLLGR2	12884.8	16393.9	7679.78
D3ZE72	D3ZE72	D3ZE72_RAT	Metap1	Methionine aminopeptidase	1	LQCPTCIK	LQC(UniMod:4)PTC(UniMod:4)IK	2	LQC(UniMod:4)PTC(UniMod:4)IK2	14746.8	21201.6	17888.8
Q29RW1	Q29RW1	MYH4_RAT	Myh4	Myosin-4	1	LQDAEEHVEAVNSK	LQDAEEHVEAVNSK	3	LQDAEEHVEAVNSK3	5468.92		
P05964	P05964	S10A6_RAT	S100a6	Protein S100-A6	1	LQDAEIAR	LQDAEIAR	2	LQDAEIAR2	83799.8	47764.5	48586.7
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	LQDAFSSIGQSCHLDLPQIAVVGGQSAGK	LQDAFSSIGQSC(UniMod:4)HLDLPQIAVVGGQSAGK	4	LQDAFSSIGQSC(UniMod:4)HLDLPQIAVVGGQSAGK4	26794.2	26996	23114.5
A0A0G2JYE1	A0A0G2JYE1	A0A0G2JYE1_RAT	Trim30c	Tripartite motif-containing 30C	1	LQDALQK	LQDALQK	1	LQDALQK1	24301.2		
A0A0G2JYE1	A0A0G2JYE1	A0A0G2JYE1_RAT	Trim30c	Tripartite motif-containing 30C	1	LQDALQK	LQDALQK	2	LQDALQK2	49399.8	48236.4	47101.1
Q4V892	Q4V892	SIGIR_RAT	Sigirr	Single Ig IL-1-related receptor	1	LQDDKDPMLIVR	LQDDKDPMLIVR	3	LQDDKDPMLIVR3	3416.09	2042.49	
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	LQDEFENR	LQDEFENR	2	LQDEFENR2	128612	131350	128949
Q6AYY8	Q6AYY8	ACATN_RAT	Slc33a1	Acetyl-coenzyme A transporter 1	1	LQDEGPSSWK	LQDEGPSSWK	2	LQDEGPSSWK2	35256.6	33403.4	32583.6
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	LQDEGTPFQMDPETGLITVR	LQDEGTPFQMDPETGLITVR	3	LQDEGTPFQMDPETGLITVR3	6764.98	8149.41	10924.9
P31000	P31000	VIME_RAT	Vim	Vimentin	1	LQDEIQNMK	LQDEIQNMK	2	LQDEIQNMK2	23164.8	23926	23969.8
P47824	P47824	P2RX1_RAT	P2rx1	P2X purinoceptor 1	1	LQDELSAFFFEYDTPR	LQDELSAFFFEYDTPR	3	LQDELSAFFFEYDTPR3	6007.7		6967
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	LQDELTTTK	LQDELTTTK	2	LQDELTTTK2	13591.1	11966.1	10802.7
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LQDELVTLR	LQDELVTLR	2	LQDELVTLR2	40955.2	44110.6	38516.4
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	LQDETVPLK	LQDETVPLK	2	LQDETVPLK2	18796.9	10714.3	8662.06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LQDFSDQLSGYYEK	LQDFSDQLSGYYEK	2	LQDFSDQLSGYYEK2	261668	295704	274478
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LQDFSDQLSGYYEK	LQDFSDQLSGYYEK	3	LQDFSDQLSGYYEK3	25110.3	26324.4	27488.3
D3ZKT8	D3ZKT8	D3ZKT8_RAT	Hddc2	5'-deoxynucleotidase HDDC2	1	LQDFYDSTAGK	LQDFYDSTAGK	2	LQDFYDSTAGK2	7474.87	8226.31	12844.9
A0A8I5ZM80	A0A8I5ZM80	A0A8I5ZM80_RAT	Armh3	Armadillo-like helical domain containing 3	1	LQDGLDQYER	LQDGLDQYER	2	LQDGLDQYER2	12005.9	7449.63	7974.29
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	LQDGPPR	LQDGPPR	2	LQDGPPR2	170654	167334	167803
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	LQDGQAFISHSPGSPEDPGMDSIVR	LQDGQAFISHSPGSPEDPGMDSIVR	3	LQDGQAFISHSPGSPEDPGMDSIVR3	18999.7	13870.4	20048.2
A0A8I6AQ74	A0A8I6AAJ5;A0A8I6AQ74	A0A8I6AQ74_RAT	ENSRNOG00000064086	Ig-like domain-containing protein	0	LQDGVPSR	LQDGVPSR	2	LQDGVPSR2	373042	284164	337534
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	LQDIVSALEDR	LQDIVSALEDR	2	LQDIVSALEDR2	11653.4	12559.9	13729.6
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	LQDLELK	LQDLELK	2	LQDLELK2	22877.9	16266.1	36930.8
D3ZFK6	D3ZFK6	D3ZFK6_RAT	Atg16l1	Autophagy related 16-like 1	1	LQDLEVANQTLK	LQDLEVANQTLK	2	LQDLEVANQTLK2	9533.67	3992.58	
D3ZYT8	D3ZYT8	D3ZYT8_RAT	Pikfyve	1-phosphatidylinositol-3-phosphate 5-kinase	1	LQDLFQQEK	LQDLFQQEK	2	LQDLFQQEK2	9114.49	3689.14	4136.17
D3ZGW2	D3ZGW2	D3ZGW2_RAT	Ap1g2	AP-1 complex subunit gamma	1	LQDLIEEIR	LQDLIEEIR	2	LQDLIEEIR2	10649.4	14332	11448.1
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	LQDLQGEK	LQDLQGEK	1	LQDLQGEK1			1243.14
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	LQDLQGEK	LQDLQGEK	2	LQDLQGEK2	144723	123223	123657
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	LQDLQGEKDALDSEK	LQDLQGEKDALDSEK	3	LQDLQGEKDALDSEK3	43886.4	35744.9	37135.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LQDLQVLGK	LQDLQVLGK	2	LQDLQVLGK2	3.31536e+06	4.13535e+06	3.72595e+06
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	LQDLYSIVR	LQDLYSIVR	2	LQDLYSIVR2	13670.1	10251.7	17970.4
P97531	P97531	CIP4_RAT	Trip10	Cdc42-interacting protein 4	1	LQDMDER	LQDMDER	2	LQDMDER2	12975.3	10467.6	16401.1
P70483	P70483	STRN_RAT	Strn	Striatin	1	LQDMLANLR	LQDMLANLR	2	LQDMLANLR2	399766	400893	401554
Q07205	Q07205;A0A8I6ADE0;A0A8I6AVQ3	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	LQDMLDGFIK	LQDMLDGFIK	2	LQDMLDGFIK2	89366.3	101109	95309.1
Q07205	Q07205;A0A8I6ADE0;A0A8I6AVQ3	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	LQDMLDGFIKK	LQDMLDGFIKK	3	LQDMLDGFIKK3	9117.03	12286.8	17961.3
Q5HZE2	Q5HZE2	TACAN_RAT	Tmem120a	Ion channel TACAN	1	LQDNCTNSITR	LQDNC(UniMod:4)TNSITR	2	LQDNC(UniMod:4)TNSITR2	14584.2	14605.8	13933.7
P21913	P21913	SDHB_RAT	Sdhb	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial	1	LQDPFSLYR	LQDPFSLYR	2	LQDPFSLYR2	211909	185304	212132
A0A8I5ZV31	A0A8I5ZV31	A0A8I5ZV31_RAT	Atp11c	Phospholipid-transporting ATPase	1	LQDQAAETIEALHAAGLK	LQDQAAETIEALHAAGLK	3	LQDQAAETIEALHAAGLK3	2275.09	6433.86	3220.48
G3V8S6	G3V8S6	G3V8S6_RAT	Hrc	Histidine rich calcium binding protein	1	LQDQDEWTR	LQDQDEWTR	2	LQDQDEWTR2	52044.1	76862.5	54127.5
B2GV53	B2GV53	B2GV53_RAT	Slc25a32	Solute carrier family 25 member 32	1	LQDQHVSYGGVTDVITK	LQDQHVSYGGVTDVITK	3	LQDQHVSYGGVTDVITK3	791.494	1796.28	2711.38
P49806	P49806	RGS10_RAT	Rgs10	Regulator of G-protein signaling 10	1	LQDQIFNLMK	LQDQIFNLMK	2	LQDQIFNLMK2	67589.8	60605	79200.2
Q5M848	Q5M848	CRCM1_RAT	Orai1	Calcium release-activated calcium channel protein 1	1	LQDQLDHR	LQDQLDHR	2	LQDQLDHR2	44731.3	31914.1	32770.8
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	LQDQSNIQR	LQDQSNIQR	2	LQDQSNIQR2	61863.2	1.11386e+07	1.14792e+07
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	LQDQVPETIETLMK	LQDQVPETIETLMK	2	LQDQVPETIETLMK2	102932	103325	111826
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	LQDQVPETIETLMK	LQDQVPETIETLMK	3	LQDQVPETIETLMK3	9041.51	6934.16	5194.96
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	LQDREWLTELFQQSK	LQDREWLTELFQQSK	2	LQDREWLTELFQQSK2		1237.2	3617.95
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	LQDREWLTELFQQSK	LQDREWLTELFQQSK	3	LQDREWLTELFQQSK3	23746.2	23185.6	28068.7
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	LQDSFCSR	LQDSFC(UniMod:4)SR	2	LQDSFC(UniMod:4)SR2	66915.6	60216.7	62345.8
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	LQDSSDPDTCSEEEVSSR	LQDSSDPDTC(UniMod:4)SEEEVSSR	3	LQDSSDPDTC(UniMod:4)SEEEVSSR3	3585.45	8352.95	5928.04
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	LQDTLEQIEEQLDVALSK	LQDTLEQIEEQLDVALSK	3	LQDTLEQIEEQLDVALSK3	2250.36	2715.74	
P54001	P54001	P4HA1_RAT	P4ha1	Prolyl 4-hydroxylase subunit alpha-1	1	LQDTYNLDTNTISK	LQDTYNLDTNTISK	2	LQDTYNLDTNTISK2	9441.95	8816.82	9769.11
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	LQDVFNTVGADIIQLPQIVVVGTQSSGK	LQDVFNTVGADIIQLPQIVVVGTQSSGK	3	LQDVFNTVGADIIQLPQIVVVGTQSSGK3		3567.27	10982.7
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	LQDVHVAEGEK	LQDVHVAEGEK	2	LQDVHVAEGEK2	21647.3	11171.8	20388.3
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	LQDVHVAEGEK	LQDVHVAEGEK	3	LQDVHVAEGEK3	46113.1	41110.2	35779.6
B5DF65	B5DF65	B5DF65_RAT	Blvrb	Biliverdin reductase B	1	LQDVTDDHIR	LQDVTDDHIR	3	LQDVTDDHIR3	11511.2	11315.6	13741
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	LQDYNVGGK	LQDYNVGGK	2	LQDYNVGGK2	106077	90295.6	107104
P12369	P12369;P12368	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	0	LQEACKDILLFK	LQEAC(UniMod:4)KDILLFK	2	LQEAC(UniMod:4)KDILLFK2	3591.61	7515.81	5863.82
P12369	P12369;P12368	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	0	LQEACKDILLFK	LQEAC(UniMod:4)KDILLFK	3	LQEAC(UniMod:4)KDILLFK3	131928	182384	199156
Q3ZU82	Q3ZU82	GOGA5_RAT	Golga5	Golgin subfamily A member 5	1	LQEADQVLSSR	LQEADQVLSSR	2	LQEADQVLSSR2	32613.9	33304.7	31992.7
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	LQEAEANLR	LQEAEANLR	2	LQEAEANLR2	601758	608727	668540
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	LQEAEANLRK	LQEAEANLRK	2	LQEAEANLRK2	27536.8	27058	20590.7
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	LQEAEANLRK	LQEAEANLRK	3	LQEAEANLRK3	118169	150019	133576
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	LQEAFSK	LQEAFSK	2	LQEAFSK2	62514.5	62609.8	56664.1
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	LQEAIQR	LQEAIQR	2	LQEAIQR2	97995.7	72261.7	73025.9
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	LQEALANK	LQEALANK	2	LQEALANK2	9305.99	8822.79	16362.1
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	LQEALER	LQEALER	2	LQEALER2	466298	416328	394968
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	LQEALISR	LQEALISR	2	LQEALISR2	40721.8	45025.4	40770.2
Q63803	Q63803	GNAS1_RAT	Gnas	Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas	1	LQEALNLFK	LQEALNLFK	2	LQEALNLFK2	38510.9	33609.2	31073
O08773	O08773	RGS14_RAT	Rgs14	Regulator of G-protein signaling 14	1	LQEALQPILAK	LQEALQPILAK	2	LQEALQPILAK2	10717.8	6173.61	10270.9
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	LQEALSSVEAFEK	LQEALSSVEAFEK	2	LQEALSSVEAFEK2	5768.57	5931.09	11799.1
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	LQEANMR	LQEANMR	2	LQEANMR2	91831.5	112796	87168.1
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	LQEAQEELAGLQQHWR	LQEAQEELAGLQQHWR	2	LQEAQEELAGLQQHWR2	1997.22	3080.05	4179.33
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	LQEAQEELAGLQQHWR	LQEAQEELAGLQQHWR	3	LQEAQEELAGLQQHWR3	211733	223814	223478
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	LQEASMR	LQEASMR	2	LQEASMR2	13965	23249.2	44531.6
A0A8I6A9R8	A0A8I6A9R8	A0A8I6A9R8_RAT	Cope	Coatomer subunit epsilon	1	LQEAYYIFQELADK	LQEAYYIFQELADK	2	LQEAYYIFQELADK2	60157	40737.3	49843.6
A0A8I6A9R8	A0A8I6A9R8	A0A8I6A9R8_RAT	Cope	Coatomer subunit epsilon	1	LQEAYYIFQELADK	LQEAYYIFQELADK	3	LQEAYYIFQELADK3	42568.3	10408.5	22348.5
D3ZHW0	D3ZHW0	D3ZHW0_RAT	Dhx29	ATP-dependent RNA helicase DHX29	1	LQEDGLLADVSHVIVDEVHER	LQEDGLLADVSHVIVDEVHER	4	LQEDGLLADVSHVIVDEVHER4	11822.9	17743.5	7755.84
E9PSX8	E9PSX8	E9PSX8_RAT	Sipa1	Signal-induced proliferation-associated 1	1	LQEDLQR	LQEDLQR	2	LQEDLQR2	240133	227899	
A0FKI7	A0FKI7;A0A8I5Y5I3	ACBD5_RAT	Acbd5	Acyl-CoA-binding domain-containing protein 5	0	LQEDMQNVLQR	LQEDMQNVLQR	2	LQEDMQNVLQR2	18623.8	12508.8	10263.4
A0A8I6GJ51	A0A8I6GJ51	A0A8I6GJ51_RAT	Ccdc85a	Coiled-coil domain containing 85A	1	LQEDNQELR	LQEDNQELR	2	LQEDNQELR2	8079.07	9396.71	7934.91
D4A7R3	D4A7R3	D4A7R3_RAT	Nup205	Nucleoporin 205	1	LQEDNVEGDR	LQEDNVEGDR	2	LQEDNVEGDR2	6081.04	4954.46	7483.67
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	LQEDPNYSPQR	LQEDPNYSPQR	2	LQEDPNYSPQR2	79252.6	60995.8	84402.9
Q6AYF8	Q6AYF8	Q6AYF8_RAT	Serpinb9	Serpin family B member 9	1	LQEDYDMESVFQR	LQEDYDMESVFQR	2	LQEDYDMESVFQR2	9813.28	14714.4	5989.35
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	LQEDYWR	LQEDYWR	2	LQEDYWR2	106784	83632.3	89168.4
P0CE43	P0CE43	GRB10_RAT	Grb10	Growth factor receptor-bound protein 10	1	LQEEDQQLR	LQEEDQQLR	2	LQEEDQQLR2	37218.8	43938.8	43920.2
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	LQEEEAELQQVLQLSLTEK	LQEEEAELQQVLQLSLTEK	3	LQEEEAELQQVLQLSLTEK3		5791.88	11717.8
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	LQEEEDAR	LQEEEDAR	2	LQEEEDAR2	29643.5		36834.9
D3ZUL1	D3ZUL1	D3ZUL1_RAT	Ccdc124	Coiled-coil domain containing 124	1	LQEEGSVEAR	LQEEGSVEAR	2	LQEEGSVEAR2	11777.3	6186.12	
A0A0G2JYN4	A0A0G2JYN4	A0A0G2JYN4_RAT	Ergic2	Endoplasmic reticulum-Golgi intermediate compartment protein	1	LQEEHSLQDVIFK	LQEEHSLQDVIFK	3	LQEEHSLQDVIFK3	12331.7	7921.03	13478.7
Q704E8	Q704E8	ABCB7_RAT	Abcb7	Iron-sulfur clusters transporter ABCB7, mitochondrial	1	LQEEIVNSVK	LQEEIVNSVK	2	LQEEIVNSVK2	27052	31724.5	18663.3
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	LQEELEK	LQEELEK	2	LQEELEK2	130698	121309	116584
A0A8I5ZM01	A0A8I5ZM01	A0A8I5ZM01_RAT	Evi5	Ecotropic viral integration site 5	1	LQEELIAVK	LQEELIAVK	2	LQEELIAVK2	6864.6	6930.21	2939.07
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	LQEELLIQEWFTLVNKK	LQEELLIQEWFTLVNKK	3	LQEELLIQEWFTLVNKK3	18551	20725.4	22219.2
F1LR42	F1LR42	F1LR42_RAT	Rufy1	RUN and FYVE domain containing 1	1	LQEELSAATDR	LQEELSAATDR	2	LQEELSAATDR2	12214.9	11755.6	12142.3
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	LQEELSQAESTIDELK	LQEELSQAESTIDELK	2	LQEELSQAESTIDELK2	5777.79	4227.35	2818.09
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	LQEELSQAESTIDELK	LQEELSQAESTIDELK	3	LQEELSQAESTIDELK3	3276.11		2849.52
P31000	P31000	VIME_RAT	Vim	Vimentin	1	LQEEMLQR	LQEEMLQR	2	LQEEMLQR2	27031.9	24381.3	18251.3
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	LQEENKELMSQLEEAGQLYHDSK	LQEENKELMSQLEEAGQLYHDSK	3	LQEENKELMSQLEEAGQLYHDSK3	2937.18		
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	LQEENKELMSQLEEAGQLYHDSK	LQEENKELMSQLEEAGQLYHDSK	4	LQEENKELMSQLEEAGQLYHDSK4		6599.51	5876.66
Q5U4F3	Q5U4F3	F107B_RAT	Fam107b	Protein FAM107B	1	LQEEQENAPEFVK	LQEEQENAPEFVK	2	LQEEQENAPEFVK2	47649.4	29966.6	34216.2
Q5U4F3	Q5U4F3	F107B_RAT	Fam107b	Protein FAM107B	1	LQEEQENAPEFVK	LQEEQENAPEFVK	3	LQEEQENAPEFVK3	2740.39		10010
A0JPM9	A0JPM9	EIF3J_RAT	Eif3j	Eukaryotic translation initiation factor 3 subunit J	1	LQEESDLELAK	LQEESDLELAK	2	LQEESDLELAK2	213011	183784	196928
G3V7K5	G3V7K5	G3V7K5_RAT	Npc1	NPC intracellular cholesterol transporter 1	1	LQEETLDQQLGR	LQEETLDQQLGR	2	LQEETLDQQLGR2	2032.7	3413.36	4089
Q6AYS6	Q6AYS6	SNX17_RAT	Snx17	Sorting nexin-17	1	LQEFELPYVSVTSLR	LQEFELPYVSVTSLR	2	LQEFELPYVSVTSLR2	12076.1	12716.9	15401.4
A0A8I6G4R8	E5RQ38;A0A8I6G4R8	A0A8I6G4R8_RAT	Hdac5	Histone deacetylase	0	LQEFLLSK	LQEFLLSK	2	LQEFLLSK2	7583.9	4934.4	7985.6
A0A8I6AUQ7	A0A8I6AUQ7	A0A8I6AUQ7_RAT	Zpr1	ZPR1 zinc finger	1	LQEFSQK	LQEFSQK	2	LQEFSQK2	13293.2	10630.8	12547.4
Q6J1Y9	Q6J1Y9	UBP19_RAT	Usp19	Ubiquitin carboxyl-terminal hydrolase 19	1	LQEFVLVASK	LQEFVLVASK	2	LQEFVLVASK2	3506.1	836.642	9656.5
D4ADT7	D4ADT7	D4ADT7_RAT	Nod1	Nucleotide-binding oligomerization domain containing 1	1	LQEGDLQLGFLR	LQEGDLQLGFLR	2	LQEGDLQLGFLR2	19232.9	19059.2	19794.4
B0BNE5	B0BNE5	ESTD_RAT	Esd	S-formylglutathione hydrolase	1	LQEGYDHSYYFIATFITDHIR	LQEGYDHSYYFIATFITDHIR	4	LQEGYDHSYYFIATFITDHIR4	5352.28	4377.02	4247.38
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	LQEHLRPYATDLQAQINAQTQDMK	LQEHLRPYATDLQAQINAQTQDMK	3	LQEHLRPYATDLQAQINAQTQDMK3	2.96799e+06	2.84789e+06	2.74011e+06
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	LQEHLRPYATDLQAQINAQTQDMK	LQEHLRPYATDLQAQINAQTQDMK	4	LQEHLRPYATDLQAQINAQTQDMK4	44253	47700.8	38958.1
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	LQEHLRPYATDLQAQINAQTQDMKR	LQEHLRPYATDLQAQINAQTQDMKR	4	LQEHLRPYATDLQAQINAQTQDMKR4	9640.33	9067.81	15504.5
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	LQEIDVFNNQLK	LQEIDVFNNQLK	2	LQEIDVFNNQLK2	146593	158239	137117
B1WBT4	B1WBT4	B1WBT4_RAT	Srpk2	SRSF protein kinase 2	1	LQEIEELER	LQEIEELER	2	LQEIEELER2	14661	11134.9	15609.2
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	LQEIEGPSVSIMQK	LQEIEGPSVSIMQK	2	LQEIEGPSVSIMQK2	32492.3	41925.3	43882.9
A0A0G2K2R0	A0A0G2K2R0	A0A0G2K2R0_RAT	Frmd4a	FERM domain containing 4A	1	LQEIENAINENR	LQEIENAINENR	2	LQEIENAINENR2	3430.71	2527.44	
A0A8I5ZRG3	A0A8I5ZRG3	A0A8I5ZRG3_RAT	Frmd4b	FERM domain containing 4B	1	LQEIENSINEYR	LQEIENSINEYR	2	LQEIENSINEYR2	7720.38	11220.8	10932.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LQEIFNTAK	LQEIFNTAK	2	LQEIFNTAK2	2.52962e+06	3.12278e+06	3.18161e+06
Q68FW4	Q68FW4	STX18_RAT	Stx18	Syntaxin-18	1	LQEIFTEK	LQEIFTEK	2	LQEIFTEK2	10345.2	14756.6	
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	LQEIGLGAFER	LQEIGLGAFER	2	LQEIGLGAFER2	32480.2	40254.5	36664.7
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	LQEILTNSK	LQEILTNSK	2	LQEILTNSK2	41539	24883.9	38252.5
B1H257	B1H257	B1H257_RAT	Borcs5	BLOC-1-related complex subunit 5	1	LQEIPTFQPLLK	LQEIPTFQPLLK	2	LQEIPTFQPLLK2	67486	69964.2	63271.1
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	LQEIQER	LQEIQER	2	LQEIQER2	92285.4	68698.1	80753.1
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	LQEIYNR	LQEIYNR	2	LQEIYNR2	301792	325175	282920
Q5HZE2	Q5HZE2	TACAN_RAT	Tmem120a	Ion channel TACAN	1	LQELALVLK	LQELALVLK	2	LQELALVLK2	3541.85	5662.6	
P08082	P08082	CLCB_RAT	Cltb	Clathrin light chain B	1	LQELDAASK	LQELDAASK	2	LQELDAASK2	40417.6	47493.5	45062.9
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	LQELEGTYEENERELEVK	LQELEGTYEENERELEVK	3	LQELEGTYEENERELEVK3	15125.3	7572.54	7442.83
D3ZCK4	D3ZCK4	D3ZCK4_RAT	Def6	DEF6 guanine nucleotide exchange factor	1	LQELELLQEAQR	LQELELLQEAQR	3	LQELELLQEAQR3		2932.66	1094.76
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	LQELESCSGLGSTSDDTDVR	LQELESC(UniMod:4)SGLGSTSDDTDVR	3	LQELESC(UniMod:4)SGLGSTSDDTDVR3	9828.09	14903.5	26175.4
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	LQELESLIANLGTGDETVTDQAFEDR	LQELESLIANLGTGDETVTDQAFEDR	3	LQELESLIANLGTGDETVTDQAFEDR3	17341.6	24067.6	26359.4
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	LQELFGCAIK	LQELFGC(UniMod:4)AIK	2	LQELFGC(UniMod:4)AIK2	76075.5	88228.8	83905
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	LQELIQK	LQELIQK	2	LQELIQK2	52549.9	51889.9	35030.2
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	LQELLLCNNR	LQELLLC(UniMod:4)NNR	2	LQELLLC(UniMod:4)NNR2	30875.4	24954.6	27113.8
D4A3E8	D4A3E8	D4A3E8_RAT	Mrps27	Mitochondrial ribosomal protein S27	1	LQELNRVESESLLTLTTQLVK	LQELNRVESESLLTLTTQLVK	3	LQELNRVESESLLTLTTQLVK3	2905.35		
D3ZPA1	D3ZPA1	D3ZPA1_RAT	Gcc1	GRIP and coiled-coil domain containing 1	1	LQELQQEAAR	LQELQQEAAR	2	LQELQQEAAR2	17044.2	18332.4	15910
Q5M849	Q5M849	Q5M849_RAT	Ifi35	Interferon-induced protein 35	1	LQELQQLK	LQELQQLK	2	LQELQQLK2	34713.5	25821.1	40593.2
A0JPJ7	A0JPJ7	OLA1_RAT	Ola1	Obg-like ATPase 1	1	LQELSAEER	LQELSAEER	2	LQELSAEER2	40335.2	18714.4	36754.5
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	LQELSMK	LQELSMK	2	LQELSMK2	249765	214172	200745
M0R8H5	M0R8H5	M0R8H5_RAT	Lrg1	Leucine-rich alpha-2-glycoprotein 1	1	LQELSPGLLAPVPR	LQELSPGLLAPVPR	2	LQELSPGLLAPVPR2	50847.6	43633.3	48512.4
M0R8H5	M0R8H5	M0R8H5_RAT	Lrg1	Leucine-rich alpha-2-glycoprotein 1	1	LQELSPGLLAPVPR	LQELSPGLLAPVPR	3	LQELSPGLLAPVPR3	8848.89	3275.01	8012.05
G3V619	G3V619	G3V619_RAT	Ascc1	Activating signal cointegrator 1 complex subunit 1	1	LQELVDR	LQELVDR	2	LQELVDR2	25220.6	10193.2	20111.4
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	LQELVKK	LQELVKK	2	LQELVKK2		8094.31	3711.73
D3ZLS5	D3ZLS5;A0A8I6ACY9	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	0	LQELVLK	LQELVLK	2	LQELVLK2	41284.5	40863.3	35146.9
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LQEMESAVK	LQEMESAVK	2	LQEMESAVK2	17892.2	25773.8	20183.7
Q9WVS2	Q9WVS2	OSGEP_RAT	Osgep	tRNA N6-adenosine threonylcarbamoyltransferase	1	LQEMMATMCQER	LQEMMATMC(UniMod:4)QER	2	LQEMMATMC(UniMod:4)QER2	4259	7091.02	928.754
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	LQEMSSK	LQEMSSK	2	LQEMSSK2	55696.9	46732	42139.4
G3V7P1	G3V7P1	STX12_RAT	Stx12	Syntaxin-12	1	LQENLQQFQHSTNQLAK	LQENLQQFQHSTNQLAK	3	LQENLQQFQHSTNQLAK3	141631	150656	141906
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	LQENPCAR	LQENPC(UniMod:4)AR	2	LQENPC(UniMod:4)AR2	40047.5	41413.1	51187.2
Q6AYC0	Q6AYC0	Q6AYC0_RAT	Haus4	HAUS augmin-like complex, subunit 4	1	LQEQDMEK	LQEQDMEK	2	LQEQDMEK2		4206.26	
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	LQEQEVFFK	LQEQEVFFK	2	LQEQEVFFK2	65373.6	86985.9	82522.5
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	LQEQLGK	LQEQLGK	2	LQEQLGK2	60370.3	54691.4	70301.4
F7F1X7	F7F1X7	F7F1X7_RAT	Pmm2	Phosphomannomutase	1	LQEQLGNDVVEK	LQEQLGNDVVEK	2	LQEQLGNDVVEK2	10040.3	6936.23	11095.3
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	LQEQLGPVTQEFWANLEK	LQEQLGPVTQEFWANLEK	3	LQEQLGPVTQEFWANLEK3	8964.07	1.69732e+07	1.83985e+07
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	LQEQLGPVTQEFWANLEKETDWLR	LQEQLGPVTQEFWANLEKETDWLR	3	LQEQLGPVTQEFWANLEKETDWLR3	1.95571e+06	2.15106e+06	2.01212e+06
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	LQEQLGPVTQEFWANLEKETDWLR	LQEQLGPVTQEFWANLEKETDWLR	4	LQEQLGPVTQEFWANLEKETDWLR4	24765.1	20641.2	33119.1
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	LQEQLGPVTQEFWANLEKETDWLRNEMNK	LQEQLGPVTQEFWANLEKETDWLRNEMNK	4	LQEQLGPVTQEFWANLEKETDWLRNEMNK4	11614.8	4803.5	6774.63
Q793F9	Q793F9	VPS4A_RAT	Vps4a	Vacuolar protein sorting-associated protein 4A	1	LQEQLMGAVVMEKPNIR	LQEQLMGAVVMEKPNIR	3	LQEQLMGAVVMEKPNIR3	7761.82	8394.22	20827.2
Q923S8	Q923S8	PANK4_RAT	Pank4	4'-phosphopantetheine phosphatase	1	LQERPWLVDSYTK	LQERPWLVDSYTK	3	LQERPWLVDSYTK3	4443.1		2524.2
D4A5S6	D4A5S6	D4A5S6_RAT	Alg1	ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase	1	LQESEQLR	LQESEQLR	2	LQESEQLR2	7453.54		8264.77
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	LQESGQVTVSELCK	LQESGQVTVSELC(UniMod:4)K	2	LQESGQVTVSELC(UniMod:4)K2	14995.7	16196.5	10816.6
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	LQESLKK	LQESLKK	2	LQESLKK2	20431	17639.3	11392.9
Q5RKH6	Q5RKH6	OS9_RAT	Os9	Protein OS-9	1	LQESQSPELVQK	LQESQSPELVQK	2	LQESQSPELVQK2	3421.31	4508.35	4441.89
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	LQESTQTVQALQYSTVDGPLTASK	LQESTQTVQALQYSTVDGPLTASK	3	LQESTQTVQALQYSTVDGPLTASK3	5446.17	4281.24	5655.82
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	LQESTQTVQSLHGSTR	LQESTQTVQSLHGSTR	2	LQESTQTVQSLHGSTR2	2770.45		1066.71
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	LQESTQTVQSLHGSTR	LQESTQTVQSLHGSTR	3	LQESTQTVQSLHGSTR3	98079.8	129996	98136.6
P08649	P08649	CO4_RAT	C4	Complement C4	1	LQETAGWLLGQQLDDGSFHDPCPVIHR	LQETAGWLLGQQLDDGSFHDPC(UniMod:4)PVIHR	4	LQETAGWLLGQQLDDGSFHDPC(UniMod:4)PVIHR4	544990	600404	504997
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	LQETEMMDPELDYTLMR	LQETEMMDPELDYTLMR	3	LQETEMMDPELDYTLMR3	8733.08	15400.2	10160.3
O88902	O88902	PTN23_RAT	Ptpn23	Tyrosine-protein phosphatase non-receptor type 23 (Fragment)	1	LQETLGQAGAGPGPSVTK	LQETLGQAGAGPGPSVTK	2	LQETLGQAGAGPGPSVTK2	6123.69	2360.03	2523.21
P53565	P53565;A0A8I5ZR58	CUX1_RAT	Cux1	Homeobox protein cut-like 1	0	LQETQMSTTSK	LQETQMSTTSK	2	LQETQMSTTSK2	8670.18	12848.8	12662.5
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	LQETWDSLDGFEPGHPVTEFNEIK	LQETWDSLDGFEPGHPVTEFNEIK	3	LQETWDSLDGFEPGHPVTEFNEIK3	6543.32	10700.4	9234.26
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	LQEVAFYQLQQDCDLGCQITIPK	LQEVAFYQLQQDC(UniMod:4)DLGC(UniMod:4)QITIPK	3	LQEVAFYQLQQDC(UniMod:4)DLGC(UniMod:4)QITIPK3	18504	22299.1	16500.7
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	LQEVECEEQR	LQEVEC(UniMod:4)EEQR	2	LQEVEC(UniMod:4)EEQR2	170472	196886	152678
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	LQEVGQVSVSLQR	LQEVGQVSVSLQR	2	LQEVGQVSVSLQR2	74948.2	67183.1	52063.6
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	LQEVIETLLSLEK	LQEVIETLLSLEK	2	LQEVIETLLSLEK2	87063.8	85811.4	86937.4
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	LQEVIETLLSLEK	LQEVIETLLSLEK	3	LQEVIETLLSLEK3	14134.9	17539.6	17715
P62716	A0A0G2JYA4;P63331;P62716	PP2AB_RAT	Ppp2cb	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	0	LQEVPHEGPMCDLLWSDPDDR	LQEVPHEGPMC(UniMod:4)DLLWSDPDDR	3	LQEVPHEGPMC(UniMod:4)DLLWSDPDDR3	184409	171060	186217
P62716	A0A0G2JYA4;P63331;P62716	PP2AB_RAT	Ppp2cb	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	0	LQEVPHEGPMCDLLWSDPDDRGGWGISPR	LQEVPHEGPMC(UniMod:4)DLLWSDPDDRGGWGISPR	4	LQEVPHEGPMC(UniMod:4)DLLWSDPDDRGGWGISPR4	44400.8	63289.1	50111.8
D4A9N5	D4A9N5	D4A9N5_RAT	Trim25	Tripartite motif-containing 25	1	LQEVSTKPVYIPK	LQEVSTKPVYIPK	3	LQEVSTKPVYIPK3	6395.01	8222.84	14902.9
A0A0G2K6J6	A0A0G2K6J6	A0A0G2K6J6_RAT	Ipo8	Importin 8	1	LQEVYTLAEHR	LQEVYTLAEHR	3	LQEVYTLAEHR3	3712.36	1555.68	
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	LQEWLPDLLETVR	LQEWLPDLLETVR	2	LQEWLPDLLETVR2	19088.4	13526.7	12082.7
D3ZW55	D3ZW55	ITPA_RAT	Itpa	Inosine triphosphate pyrophosphatase	1	LQEYFGVTDGAGDH	LQEYFGVTDGAGDH	2	LQEYFGVTDGAGDH2	2930.97	2812.47	3540.41
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	LQEYLGK	LQEYLGK	2	LQEYLGK2	14273.1	15747.1	15043.2
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	LQEYLSGR	LQEYLSGR	2	LQEYLSGR2	70206.8	70754.9	74167.1
Q91XU8	Q91XU8	CDS2_RAT	Cds2	Phosphatidate cytidylyltransferase 2	1	LQEYNIPGVIQSLVGWK	LQEYNIPGVIQSLVGWK	2	LQEYNIPGVIQSLVGWK2	24295.3	27634.9	31969
Q91XU8	Q91XU8	CDS2_RAT	Cds2	Phosphatidate cytidylyltransferase 2	1	LQEYNIPGVIQSLVGWK	LQEYNIPGVIQSLVGWK	3	LQEYNIPGVIQSLVGWK3	2405.05	6706.72	4428.44
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	LQFAPFNSALDVGFWHELTQK	LQFAPFNSALDVGFWHELTQK	3	LQFAPFNSALDVGFWHELTQK3	14779.1	17259.6	14367.2
Q5M962	Q5M962	TM204_RAT	Tmem204	Transmembrane protein 204	1	LQFDMMR	LQFDMMR	2	LQFDMMR2	10261.5	10501.3	10132.8
D3ZKE1	D3ZKE1	D3ZKE1_RAT	Uvrag	UV radiation resistance associated	1	LQFDYGVYLLNK	LQFDYGVYLLNK	2	LQFDYGVYLLNK2	2440.26	663.212	7201.18
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	LQFEELEVDYEAIR	LQFEELEVDYEAIR	2	LQFEELEVDYEAIR2	9528.75	9550.16	
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	LQFEELEVDYEAIRSEMEQLK	LQFEELEVDYEAIRSEMEQLK	3	LQFEELEVDYEAIRSEMEQLK3	3672.84	3300.63	
D3Z9L0	D3Z9L0	D3Z9L0_RAT	Agk	Acylglycerol kinase, mitochondrial	1	LQFFCDPR	LQFFC(UniMod:4)DPR	2	LQFFC(UniMod:4)DPR2	14786.2	11731.9	11800.9
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	LQFGTSHVFK	LQFGTSHVFK	3	LQFGTSHVFK3	8091.02	5971.33	6407.06
Q5RK08	Q5RK08	Q5RK08_RAT	Nipsnap2	Glioblastoma amplified sequence	1	LQFHNVKPECLDAYNK	LQFHNVKPEC(UniMod:4)LDAYNK	3	LQFHNVKPEC(UniMod:4)LDAYNK3	19033.8	9186.82	6923.14
Q5RK08	Q5RK08	Q5RK08_RAT	Nipsnap2	Glioblastoma amplified sequence	1	LQFHNVKPECLDAYNK	LQFHNVKPEC(UniMod:4)LDAYNK	4	LQFHNVKPEC(UniMod:4)LDAYNK4	59692.1	74516.5	52579
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	LQFIADR	LQFIADR	2	LQFIADR2	186269	195553	161824
A0A8I5ZVY6	A0A8I5ZVY6	A0A8I5ZVY6_RAT	Rint1	RAD50 interactor 1	1	LQFLELQK	LQFLELQK	2	LQFLELQK2	22376.7	17730.2	12270.8
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	LQFLFELPSR	LQFLFELPSR	2	LQFLFELPSR2	24834.8	18378.9	16730
Q5FVQ9	Q5FVQ9	TBCE_RAT	Tbce	Tubulin-specific chaperone E	1	LQFPSDSPTLTR	LQFPSDSPTLTR	2	LQFPSDSPTLTR2	17769.9	17201.6	17109.2
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	LQFSEQVENIKPEIVSVTAACEELR	LQFSEQVENIKPEIVSVTAAC(UniMod:4)EELR	3	LQFSEQVENIKPEIVSVTAAC(UniMod:4)EELR3	18686.8	28254.6	20638.7
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	LQFSEQVENIKPEIVSVTAACEELRK	LQFSEQVENIKPEIVSVTAAC(UniMod:4)EELRK	4	LQFSEQVENIKPEIVSVTAAC(UniMod:4)EELRK4	22093.5	24725.2	30310.6
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	LQFYEDK	LQFYEDK	2	LQFYEDK2	28939.4	19011.6	32479
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	LQFYEDKHQLPAPK	LQFYEDKHQLPAPK	3	LQFYEDKHQLPAPK3	15336.7	10288.7	10729.3
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	LQFYEDKHQLPAPK	LQFYEDKHQLPAPK	4	LQFYEDKHQLPAPK4	19393.7	24115.5	14792.1
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	LQGAHLTSILSHEEQMFVNR	LQGAHLTSILSHEEQMFVNR	3	LQGAHLTSILSHEEQMFVNR3	3783.31	6656.36	6267.38
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	LQGAHLTSILSHEEQMFVNR	LQGAHLTSILSHEEQMFVNR	4	LQGAHLTSILSHEEQMFVNR4	8159.03	6154.81	4266.14
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LQGASNFAGIWNFEVGENFAGEATLR	LQGASNFAGIWNFEVGENFAGEATLR	3	LQGASNFAGIWNFEVGENFAGEATLR3	7463.82	11875.5	11692.1
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LQGEFQLR	LQGEFQLR	2	LQGEFQLR2	339722	397890	390519
P0C2C4	P0C2C4	RM10_RAT	Mrpl10	Large ribosomal subunit protein uL10m	1	LQGELVGGLTHLTAQTR	LQGELVGGLTHLTAQTR	3	LQGELVGGLTHLTAQTR3	20342.9	19214	19282.1
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	LQGEMAHIQVGQMTQAGLLEHLK	LQGEMAHIQVGQMTQAGLLEHLK	4	LQGEMAHIQVGQMTQAGLLEHLK4	3583.92	2763.65	5036.84
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	LQGEMMK	LQGEMMK	2	LQGEMMK2	385239	337678	391744
Q6MGC4	Q6MGC4	Q6MGC4_RAT	Pfdn6	Prefoldin subunit 6	1	LQGEVEK	LQGEVEK	2	LQGEVEK2	32493.8	59170.7	65319.7
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	LQGEVEQLQK	LQGEVEQLQK	2	LQGEVEQLQK2	76644.6	94364.8	92446.8
Q9Z269	Q9Z269	VAPB_RAT	Vapb	Vesicle-associated membrane protein-associated protein B	1	LQGEVQR	LQGEVQR	2	LQGEVQR2	174196	310723	390774
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	LQGFEGTLTAQGK	LQGFEGTLTAQGK	2	LQGFEGTLTAQGK2	241828	240812	249367
Q4G050	Q4G050	MKNK1_RAT	Mknk1	MAP kinase-interacting serine/threonine-protein kinase 1	1	LQGGSILAHIQK	LQGGSILAHIQK	3	LQGGSILAHIQK3	10193.7	6818.55	17494
P20611	P20611	PPAL_RAT	Acp2	Lysosomal acid phosphatase	1	LQGGVLLAQILK	LQGGVLLAQILK	2	LQGGVLLAQILK2	36923.3	36098.5	32657.5
O35370	O35370	O35370_RAT	Thbd	Thrombomodulin	1	LQGHLMTVR	LQGHLMTVR	2	LQGHLMTVR2	28981.6	28415.6	15982.9
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	LQGHQDQIFSLAWSPDGK	LQGHQDQIFSLAWSPDGK	3	LQGHQDQIFSLAWSPDGK3	38991.8	24988	35173.9
D3ZME7	D3ZME7	D3ZME7_RAT	Hscb	HscB mitochondrial iron-sulfur cluster co-chaperone	1	LQGIEIPEGTDYR	LQGIEIPEGTDYR	2	LQGIEIPEGTDYR2	5889.49	8449.47	14015.3
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	LQGIESK	LQGIESK	1	LQGIESK1	20392.2	18526.2	15200.7
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	LQGIESK	LQGIESK	2	LQGIESK2	3.10837e+06	3.25622e+06	3.50203e+06
F1M6V8	F1M6V8	F1M6V8_RAT	Strn4	Striatin 4	1	LQGILADLR	LQGILADLR	2	LQGILADLR2	29542.7	22451.7	28970.2
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	LQGILSQSQDK	LQGILSQSQDK	2	LQGILSQSQDK2	8695.75	10959.3	21437.6
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	LQGIMELLESIPKPEPVTDVSAPAR	LQGIMELLESIPKPEPVTDVSAPAR	3	LQGIMELLESIPKPEPVTDVSAPAR3	18569.4	15660.6	25095.8
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	LQGLVLK	LQGLVLK	2	LQGLVLK2	78349.8	93816.6	84214.7
D3ZRJ7	D3ZRJ7	D3ZRJ7_RAT	Lrrk1	non-specific serine/threonine protein kinase	1	LQGNLLLSLPHHEK	LQGNLLLSLPHHEK	4	LQGNLLLSLPHHEK4	1118.25	2039.22	3966.32
F1M471	F1M471	F1M471_RAT	Epm2aip1	EPM2A interacting protein 1	1	LQGNTDLWNEYR	LQGNTDLWNEYR	2	LQGNTDLWNEYR2	8889.95	2107.63	3510.75
D3ZE05	D3ZE05	D3ZE05_RAT	Cilp2	Cartilage intermediate layer protein 2	1	LQGPQEYMVR	LQGPQEYMVR	2	LQGPQEYMVR2	46469.8	50184.1	44219.1
D3ZAP9	D3ZAP9	D3ZAP9_RAT	Gpd1l1	Glycerol-3-phosphate dehydrogenase [NAD(+)]	1	LQGPQTSAEVYR	LQGPQTSAEVYR	2	LQGPQTSAEVYR2	16285.4	11285.2	14943.8
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	LQGQLEQGDDTAAEK	LQGQLEQGDDTAAEK	2	LQGQLEQGDDTAAEK2	23172.9	24006.9	23588.2
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	LQGQLQGGSR	LQGQLQGGSR	2	LQGQLQGGSR2	8643.98	11234.3	21033
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	LQGQQLPVVLPPIMK	LQGQQLPVVLPPIMK	2	LQGQQLPVVLPPIMK2	6944.56	5972.51	7408.26
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LQGQVDK	LQGQVDK	1	LQGQVDK1			1576.08
P86182	P86182	CCD22_RAT	Ccdc22	Coiled-coil domain-containing protein 22	1	LQGSALQQAFHSSR	LQGSALQQAFHSSR	3	LQGSALQQAFHSSR3	11908.3	16764.9	19327.5
D3ZA85	D3ZA85	D3ZA85_RAT	Nfu1	NFU1 iron-sulfur cluster scaffold homolog, mitochondrial	1	LQGSCTSCPSSIITLK	LQGSC(UniMod:4)TSC(UniMod:4)PSSIITLK	2	LQGSC(UniMod:4)TSC(UniMod:4)PSSIITLK2	3412.52		2045.7
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	LQGSVLTFVGGLPDVQVTSTPVTAFYR	LQGSVLTFVGGLPDVQVTSTPVTAFYR	3	LQGSVLTFVGGLPDVQVTSTPVTAFYR3	36918.7	39096.3	38047.4
P08650	P08650	CO5_RAT	C5	Complement C5	1	LQGTLPAEAQENTLYLTAFSVIGIR	LQGTLPAEAQENTLYLTAFSVIGIR	3	LQGTLPAEAQENTLYLTAFSVIGIR3	19302.5	11167.2	8695.16
P08650	P08650	CO5_RAT	C5	Complement C5	1	LQGTLPAEAQENTLYLTAFSVIGIRK	LQGTLPAEAQENTLYLTAFSVIGIRK	3	LQGTLPAEAQENTLYLTAFSVIGIRK3	9205.01	12270.2	
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	LQHAAELEQK	LQHAAELEQK	2	LQHAAELEQK2	11338.7	4272.42	8121.12
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	LQHAAELEQK	LQHAAELEQK	3	LQHAAELEQK3	8952.3	10569.5	7859.91
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	LQHAAELIK	LQHAAELIK	2	LQHAAELIK2	20615.2	14249.8	10315.3
D3ZQ80	D3ZQ80	D3ZQ80_RAT	Smg8	Nonsense-mediated mRNA decay factor SMG8	1	LQHALEDQIYR	LQHALEDQIYR	3	LQHALEDQIYR3	4482.99	2944.54	5624.67
D3ZSM9	D3ZSM9	D3ZSM9_RAT	Brat1	BRCA1-associated ATM activator 1	1	LQHCPQELR	LQHC(UniMod:4)PQELR	3	LQHC(UniMod:4)PQELR3		1891.01	
Q6P6Q9	Q6P6Q9	MICU1_RAT	Micu1	Calcium uptake protein 1, mitochondrial	1	LQHDVLK	LQHDVLK	2	LQHDVLK2	9555.14	9588.67	5560.66
P30427	P30427	PLEC_RAT	Plec	Plectin	1	LQHEATAATQK	LQHEATAATQK	3	LQHEATAATQK3			5355.69
P97612	P97612	FAAH1_RAT	Faah	Fatty-acid amide hydrolase 1	1	LQHEIEMYR	LQHEIEMYR	3	LQHEIEMYR3	21953.4	28926.6	25652.4
Q5U2M6	Q5U2M6	DCAF8_RAT	Dcaf8	DDB1- and CUL4-associated factor 8	1	LQHGLEGHTGCVNTLHFNQR	LQHGLEGHTGC(UniMod:4)VNTLHFNQR	4	LQHGLEGHTGC(UniMod:4)VNTLHFNQR4	3766.61		
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	LQHGSILGFPK	LQHGSILGFPK	3	LQHGSILGFPK3	100463	78706.7	101688
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	LQHGSTETASPSIK	LQHGSTETASPSIK	3	LQHGSTETASPSIK3	18135.8	14993.6	10308.8
P45479	P45479	PPT1_RAT	Ppt1	Palmitoyl-protein thioesterase 1	1	LQHGYNAIGFSQGGQFLR	LQHGYNAIGFSQGGQFLR	3	LQHGYNAIGFSQGGQFLR3	19888.8	19547.7	23553.3
Q3KRE2	Q3KRE2	Q3KRE2_RAT	Mettl7a	Methyltransferase like 7A	1	LQHIQAPLSWALVR	LQHIQAPLSWALVR	2	LQHIQAPLSWALVR2	1260.03	3406.71	
Q3KRE2	Q3KRE2	Q3KRE2_RAT	Mettl7a	Methyltransferase like 7A	1	LQHIQAPLSWALVR	LQHIQAPLSWALVR	3	LQHIQAPLSWALVR3	17429.6	15254.5	20076.3
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	LQHLAESWGGK	LQHLAESWGGK	2	LQHLAESWGGK2	6183.65	9733.46	10304.9
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	LQHLAESWGGK	LQHLAESWGGK	3	LQHLAESWGGK3	32725.4	30825.2	29917.6
Q63493	Q63493	CD1D_RAT	Cd1d	Antigen-presenting glycoprotein CD1d	1	LQHMFQVYR	LQHMFQVYR	2	LQHMFQVYR2	21610.6	14087.7	15073.1
Q63493	Q63493	CD1D_RAT	Cd1d	Antigen-presenting glycoprotein CD1d	1	LQHMFQVYR	LQHMFQVYR	3	LQHMFQVYR3	43589	51018.2	53852.2
D3ZD83	D3ZD83	D3ZD83_RAT	Mfsd10	Major facilitator superfamily domain containing 10	1	LQHPAQTLKEE	LQHPAQTLKEE	2	LQHPAQTLKEE2	4951.63	2640.66	3748.84
D3ZD83	D3ZD83	D3ZD83_RAT	Mfsd10	Major facilitator superfamily domain containing 10	1	LQHPAQTLKEE	LQHPAQTLKEE	3	LQHPAQTLKEE3	8758.77	7149.8	11554.6
D3ZLM5	D3ZLM5	D3ZLM5_RAT	Nhlrc2	NHL repeat containing 2	1	LQHPLGVAWDEK	LQHPLGVAWDEK	3	LQHPLGVAWDEK3	3672.89	2521.46	
D3ZXB1	D3ZXB1	D3ZXB1_RAT	Map4k2	Mitogen-activated protein kinase kinase kinase kinase 2	1	LQHQAPLSIPTNR	LQHQAPLSIPTNR	3	LQHQAPLSIPTNR3	7978.46	11555.8	7733.28
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	LQHQTELENQLEYNK	LQHQTELENQLEYNK	2	LQHQTELENQLEYNK2	22056.8	15523.8	15881.8
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	LQHQTELENQLEYNK	LQHQTELENQLEYNK	3	LQHQTELENQLEYNK3	66913.6	86132.3	96131.2
Q9JLS3	Q9JLS3	TAOK2_RAT	Taok2	Serine/threonine-protein kinase TAO2	1	LQHQTELGNQLEYNK	LQHQTELGNQLEYNK	3	LQHQTELGNQLEYNK3	1625.14	4402.41	5136.85
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	LQHQTELTNQLEYNK	LQHQTELTNQLEYNK	3	LQHQTELTNQLEYNK3	10748.7		6811.32
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	LQHSTEEHLR	LQHSTEEHLR	2	LQHSTEEHLR2			3061.68
Q5EB73	Q5EB73	PGAP4_RAT	Pgap4	Post-GPI attachment to proteins factor 4	1	LQHYINPEPMR	LQHYINPEPMR	3	LQHYINPEPMR3	7270.26	9743.21	11842.2
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	LQIAQLYPISIFIKPK	LQIAQLYPISIFIKPK	3	LQIAQLYPISIFIKPK3	2279.71	2165.11	2964.54
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	LQICTQHHTEAIGK	LQIC(UniMod:4)TQHHTEAIGK	3	LQIC(UniMod:4)TQHHTEAIGK3	10276.1	16444.9	15345.8
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	LQICTQHHTEAIGK	LQIC(UniMod:4)TQHHTEAIGK	4	LQIC(UniMod:4)TQHHTEAIGK4	11290.9	9785.45	21787
Q5XI81	Q80WE1;Q5XI81;A0A8J8YNR6	FXR1_RAT	Fxr1	RNA-binding protein FXR1	0	LQIDEQLR	LQIDEQLR	2	LQIDEQLR2	72110.9	81219.3	73296.5
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	LQIIPGAK	LQIIPGAK	2	LQIIPGAK2	23358	26648	20313.2
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	LQILELR	LQILELR	2	LQILELR2	1.04665e+06	1.11823e+06	1.0806e+06
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	LQILHIHTAR	LQILHIHTAR	3	LQILHIHTAR3	37432.3	23048.2	41562.4
D4A8F2	D4A8F2	D4A8F2_RAT	Rsu1	Ras suppressor protein 1	1	LQILSLR	LQILSLR	2	LQILSLR2	1.24161e+06	1.00699e+06	1.1972e+06
D4A8F2	D4A8F2	D4A8F2_RAT	Rsu1	Ras suppressor protein 1	1	LQILSLRDNDLISLPK	LQILSLRDNDLISLPK	3	LQILSLRDNDLISLPK3	13273.9	15601.9	15334.7
O88588	D3ZJG4;O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	0	LQIMLQR	LQIMLQR	2	LQIMLQR2	233164	232877	232756
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	LQINAQNCVHCK	LQINAQNC(UniMod:4)VHC(UniMod:4)K	2	LQINAQNC(UniMod:4)VHC(UniMod:4)K2	6313.64	1809.27	5652.95
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	LQINAQNCVHCK	LQINAQNC(UniMod:4)VHC(UniMod:4)K	3	LQINAQNC(UniMod:4)VHC(UniMod:4)K3	61709.6	51188.6	55266.9
Q68FR9	Q68FR9;B5DEN5	EF1D_RAT	Eef1d	Elongation factor 1-delta	0	LQIQCVVEDDK	LQIQC(UniMod:4)VVEDDK	2	LQIQC(UniMod:4)VVEDDK2	1.52192e+06	1.64116e+06	1.73179e+06
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	LQIQCVVEDDKVGTDLLEEEITK	LQIQC(UniMod:4)VVEDDKVGTDLLEEEITK	3	LQIQC(UniMod:4)VVEDDKVGTDLLEEEITK3	51446.7	48762.8	64750.2
E9PU02	E9PU02	E9PU02_RAT	Trappc9	Trafficking protein particle complex subunit 9	1	LQISTSLPR	LQISTSLPR	2	LQISTSLPR2	19998	20704.6	15766.6
F7EYK0	F7EYK0	F7EYK0_RAT	Fkbp5	peptidylprolyl isomerase	1	LQISVCQR	LQISVC(UniMod:4)QR	2	LQISVC(UniMod:4)QR2	26319.8	20369.5	23007.3
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	LQIVFDFVASK	LQIVFDFVASK	2	LQIVFDFVASK2	10740.2	6149.61	8957.65
P61107	P35281;P35284;P62824;P51156;Q63941;P70550;P63012;Q53B90;Q6NYB7;P10536;P51146;Q63942;P35280;D4A0G7;Q5U316;P05714;P61107;A0A0G2JTT4	RAB14_RAT	Rab14	Ras-related protein Rab-14	0	LQIWDTAGQER	LQIWDTAGQER	2	LQIWDTAGQER2		3.99722e+06	
P61107	P35281;P35284;P62824;P51156;Q63941;P70550;P63012;Q53B90;Q6NYB7;P10536;P51146;Q63942;P35280;D4A0G7;Q5U316;P05714;P61107;A0A0G2JTT4	RAB14_RAT	Rab14	Ras-related protein Rab-14	0	LQIWDTAGQER	LQIWDTAGQER	3	LQIWDTAGQER3	50318.3	51692.4	70786.5
P05712	Q3B7V5;P05712	RAB2A_RAT	Rab2a	Ras-related protein Rab-2A	0	LQIWDTAGQESFR	LQIWDTAGQESFR	2	LQIWDTAGQESFR2	275252	262174	316679
P05712	Q3B7V5;P05712	RAB2A_RAT	Rab2a	Ras-related protein Rab-2A	0	LQIWDTAGQESFR	LQIWDTAGQESFR	3	LQIWDTAGQESFR3	10081	11626.8	10374.1
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	LQLALDVEHLGEQIQK	LQLALDVEHLGEQIQK	3	LQLALDVEHLGEQIQK3	21928	22648.8	17859.5
O54923	O54923	EXOC6_RAT	Exoc6	Exocyst complex component 6	1	LQLCLPVLEMYSK	LQLC(UniMod:4)LPVLEMYSK	2	LQLC(UniMod:4)LPVLEMYSK2	5507.86	9930.86	7954.03
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	LQLCYQLSTVGK	LQLC(UniMod:4)YQLSTVGK	2	LQLC(UniMod:4)YQLSTVGK2	94977.2	92121.1	64629.9
A0A0G2JUF2	A0A0G2JUF2	A0A0G2JUF2_RAT	Snx30	Sorting nexin family member 30	1	LQLDDDIDGETR	LQLDDDIDGETR	2	LQLDDDIDGETR2	5310.93	2526.19	2291.76
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	LQLDGPPR	LQLDGPPR	2	LQLDGPPR2	162079	139870	174899
Q5XIR2	Q5XIR2	Q5XIR2_RAT	Ift74	Intraflagellar transport 74	1	LQLDLQK	LQLDLQK	1	LQLDLQK1	24505.6	21404.6	29078.4
Q5XIR2	Q5XIR2	Q5XIR2_RAT	Ift74	Intraflagellar transport 74	1	LQLDLQK	LQLDLQK	2	LQLDLQK2	44949.1	61247.1	54154.7
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	LQLDSPEDAEFIVAK	LQLDSPEDAEFIVAK	2	LQLDSPEDAEFIVAK2	133513	155949	133334
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	LQLDSPEDAEFIVAK	LQLDSPEDAEFIVAK	3	LQLDSPEDAEFIVAK3	6734.06	6195.15	8103.39
Q9ERE4	Q9ERE4	GOLP3_RAT	Golph3	Golgi phosphoprotein 3	1	LQLEACGMR	LQLEAC(UniMod:4)GMR	2	LQLEAC(UniMod:4)GMR2	23792.6	21008	15296.6
Q9JIA3	Q9JIA3	IKBB_RAT	Nfkbib	NF-kappa-B inhibitor beta	1	LQLEAENYDGHTPLHVAVIHK	LQLEAENYDGHTPLHVAVIHK	4	LQLEAENYDGHTPLHVAVIHK4	3961.02	2072.23	
Q9EPJ3	Q9EPJ3	RT26_RAT	Mrps26	Small ribosomal subunit protein mS26	1	LQLEAQAQELR	LQLEAQAQELR	2	LQLEAQAQELR2	7469.1	7222.77	4668.4
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	LQLEDISVGSLPNLHSIER	LQLEDISVGSLPNLHSIER	3	LQLEDISVGSLPNLHSIER3	24552.1	34174.3	45496.7
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	LQLEDQVTELR	LQLEDQVTELR	2	LQLEDQVTELR2	37201	44899	46901.7
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	LQLEEER	LQLEEER	2	LQLEEER2	764314	820333	915098
Q62812	F1LNF0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	LQLEKVTTEAK	LQLEKVTTEAK	3	LQLEKVTTEAK3	13910.3	17548	22495.2
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	LQLELLWNPLDSECR	LQLELLWNPLDSEC(UniMod:4)R	2	LQLELLWNPLDSEC(UniMod:4)R2	6417.61	8329.89	12757
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	LQLELNQER	LQLELNQER	2	LQLELNQER2	26209.1	37636.5	48970.4
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	LQLELSK	LQLELSK	2	LQLELSK2	54233.2	40873.5	46333.6
P51111	P51111	HD_RAT	Htt	Huntingtin	1	LQLELYK	LQLELYK	2	LQLELYK2	74566.9	67176.2	58772
Q5BJY9	A0A8I6A244;Q5BJY9	K1C18_RAT	Krt18	Keratin, type I cytoskeletal 18	0	LQLETEIEALK	LQLETEIEALK	2	LQLETEIEALK2	15089.8	1840.54	2414.17
E9PU03	E9PU03	E9PU03_RAT	Smg5	Nonsense-mediated mRNA decay factor	1	LQLEVSQLEGSLQQPK	LQLEVSQLEGSLQQPK	2	LQLEVSQLEGSLQQPK2	7247.97	3627.18	10461.1
P29315	P29315	RINI_RAT	Rnh1	Ribonuclease inhibitor	1	LQLEYCNLTATSCEPLASVLR	LQLEYC(UniMod:4)NLTATSC(UniMod:4)EPLASVLR	3	LQLEYC(UniMod:4)NLTATSC(UniMod:4)EPLASVLR3	7164.88	5341.87	17291.9
P62483	P62483	KCAB2_RAT	Kcnab2	Voltage-gated potassium channel subunit beta-2	1	LQLEYVDVVFANRPDPNTPMEETVR	LQLEYVDVVFANRPDPNTPMEETVR	3	LQLEYVDVVFANRPDPNTPMEETVR3	32963.8	23320.2	35171.3
P63144	P63144	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	1	LQLEYVDVVFANRPDSNTPMEEIVR	LQLEYVDVVFANRPDSNTPMEEIVR	3	LQLEYVDVVFANRPDSNTPMEEIVR3	35909.8	22196.7	25546.6
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	LQLFGQDFSQAAHSTPDGVPFIIK	LQLFGQDFSQAAHSTPDGVPFIIK	3	LQLFGQDFSQAAHSTPDGVPFIIK3	399924	575250	570794
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	LQLFGQDFSQAAHSTPDGVPFIIK	LQLFGQDFSQAAHSTPDGVPFIIK	4	LQLFGQDFSQAAHSTPDGVPFIIK4	17191.5	16672.2	16902.3
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	LQLFGQDFSQAAHSTPDGVPFIIKK	LQLFGQDFSQAAHSTPDGVPFIIKK	3	LQLFGQDFSQAAHSTPDGVPFIIKK3	14357	13859.8	19576.5
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	LQLFGQDFSQAAHSTPDGVPFIIKK	LQLFGQDFSQAAHSTPDGVPFIIKK	4	LQLFGQDFSQAAHSTPDGVPFIIKK4	26477	29203	34715.8
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	LQLFIQEVNHAVEETSLQALQNMPK	LQLFIQEVNHAVEETSLQALQNMPK	3	LQLFIQEVNHAVEETSLQALQNMPK3	5859.27	3181.17	2908.6
Q5XIL2	Q5XIL2	P4K2B_RAT	Pi4k2b	Phosphatidylinositol 4-kinase type 2-beta	1	LQLGIVPK	LQLGIVPK	2	LQLGIVPK2	7465.94	9544.46	7589.91
D4A2W1	D4A2W1	D4A2W1_RAT	Enpp4	Ectonucleotide pyrophosphatase/phosphodiesterase 4	1	LQLHEDDDDDPLIE	LQLHEDDDDDPLIE	2	LQLHEDDDDDPLIE2	26728.1	24326.1	32529.3
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	LQLHESQK	LQLHESQK	2	LQLHESQK2		214744	
A0A0G2JU49	A0A0G2JU49	A0A0G2JU49_RAT	Mtx1	Metaxin 1	1	LQLLCGEHR	LQLLC(UniMod:4)GEHR	2	LQLLC(UniMod:4)GEHR2	15799.7	9238.85	11913.2
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	LQLLDLSR	LQLLDLSR	1	LQLLDLSR1	29975.7	14422.2	
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	LQLLDLSR	LQLLDLSR	2	LQLLDLSR2	5.64168e+06	4.37069e+06	3.87612e+06
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	LQLLDVK	LQLLDVK	2	LQLLDVK2	13344.4	17389.1	20615
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	LQLLEDLER	LQLLEDLER	2	LQLLEDLER2	97996.8	47897.2	56327.2
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	LQLLEDLERK	LQLLEDLERK	3	LQLLEDLERK3	11541.1	15955.2	16462.7
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	LQLLEPFDK	LQLLEPFDK	2	LQLLEPFDK2	122811	103201	282896
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	LQLLEPFDKWDGK	LQLLEPFDKWDGK	3	LQLLEPFDKWDGK3	62504.2	46605.7	60378.1
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LQLLLLHTR	LQLLLLHTR	2	LQLLLLHTR2	87746.5	11537	51407.8
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	LQLLLLNPLK	LQLLLLNPLK	2	LQLLLLNPLK2	32861.8	52151.2	36474.2
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	LQLLQEDYNR	LQLLQEDYNR	2	LQLLQEDYNR2	108283	118249	109986
D3ZAZ0	D3ZAZ0	D3ZAZ0_RAT	Eif3m	Eukaryotic translation initiation factor 3 subunit M	1	LQLLSNLFHGMDK	LQLLSNLFHGMDK	2	LQLLSNLFHGMDK2	15257.6	11241.8	11443.7
D3ZAZ0	D3ZAZ0	D3ZAZ0_RAT	Eif3m	Eukaryotic translation initiation factor 3 subunit M	1	LQLLSNLFHGMDK	LQLLSNLFHGMDK	3	LQLLSNLFHGMDK3	84502.7	86271.9	89788.8
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	LQLLSPQVDINSPINAK	LQLLSPQVDINSPINAK	2	LQLLSPQVDINSPINAK2	22988.2	26627.4	24944.8
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	LQLLSPQVDINSPINAK	LQLLSPQVDINSPINAK	3	LQLLSPQVDINSPINAK3	5600.03	5441.16	3816.58
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	LQLMEQK	LQLMEQK	2	LQLMEQK2	6472.61	13568.8	
A0A8I6ANG1	A0A8I6ANG1	A0A8I6ANG1_RAT	Asb6	Ankyrin repeat and SOCS box-containing 6	1	LQLPENFNIHPVGGLAGK	LQLPENFNIHPVGGLAGK	3	LQLPENFNIHPVGGLAGK3	10241	5680.66	7273.6
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	LQLQLNQEK	LQLQLNQEK	2	LQLQLNQEK2	18995	20611.3	11377.9
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	LQLQQEMELLNAYQSK	LQLQQEMELLNAYQSK	2	LQLQQEMELLNAYQSK2	20816	33075.6	22157.1
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	LQLQQEMELLNAYQSK	LQLQQEMELLNAYQSK	3	LQLQQEMELLNAYQSK3	54428.5	52999.3	52375.4
D3ZRI9	D3ZRI9	D3ZRI9_RAT	Gan	Gigaxonin	1	LQLQQGLFR	LQLQQGLFR	2	LQLQQGLFR2	30238	23988.9	29372.9
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LQLQQQEK	LQLQQQEK	2	LQLQQQEK2	99455.9	87389.6	77745.9
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LQLQTDSEALVALGAVDTALYAVGGR	LQLQTDSEALVALGAVDTALYAVGGR	3	LQLQTDSEALVALGAVDTALYAVGGR3	324736	437965	419622
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LQLQTDSEALVALGAVDTALYAVGGR	LQLQTDSEALVALGAVDTALYAVGGR	4	LQLQTDSEALVALGAVDTALYAVGGR4	12488.1		
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	LQLSEFVTVFEK	LQLSEFVTVFEK	2	LQLSEFVTVFEK2	10892.4	9820.09	8505.86
Q9EQX6	Q9EQX6	PDGFC_RAT	Pdgfc	Platelet-derived growth factor C	1	LQLSSDKEQNGVQDPR	LQLSSDKEQNGVQDPR	3	LQLSSDKEQNGVQDPR3	38364	25591.7	29293.2
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	LQLSVTEVGTEK	LQLSVTEVGTEK	2	LQLSVTEVGTEK2	7097.22	8441.42	6816.01
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	LQLTDEQLQNR	LQLTDEQLQNR	2	LQLTDEQLQNR2	17329.1	10933.1	12859
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	LQLTGHAMPR	LQLTGHAMPR	2	LQLTGHAMPR2	47172.9	27608.3	19997.6
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	LQLVEAECK	LQLVEAEC(UniMod:4)K	2	LQLVEAEC(UniMod:4)K2	232754	244160	236395
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	LQLVEAK	LQLVEAK	2	LQLVEAK2	54797.5	65691.2	63079.3
B5DF93	B5DF93	PATL1_RAT	Patl1	Protein PAT1 homolog 1	1	LQLVQGMR	LQLVQGMR	2	LQLVQGMR2	11882.6	10862.2	9709.35
P86182	P86182	CCD22_RAT	Ccdc22	Coiled-coil domain-containing protein 22	1	LQLVVESSAQR	LQLVVESSAQR	2	LQLVVESSAQR2	10773.7	11337.1	12201
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	LQLWAFK	LQLWAFK	2	LQLWAFK2	199412	202398	201440
Q63481	Q63483;Q63481	RAB7L_RAT	Rab29	Ras-related protein Rab-7L1	0	LQLWDIAGQER	LQLWDIAGQER	2	LQLWDIAGQER2	118503	110930	122609
Q9WVB1	A0A0G2JT78;A0A8I6A0V2;Q9WVB1;D3ZZP2	RAB6A_RAT	Rab6a	Ras-related protein Rab-6A	0	LQLWDTAGQER	LQLWDTAGQER	2	LQLWDTAGQER2	639701	587640	710447
Q9WVB1	A0A0G2JT78;A0A8I6A0V2;Q9WVB1;D3ZZP2	RAB6A_RAT	Rab6a	Ras-related protein Rab-6A	0	LQLWDTAGQER	LQLWDTAGQER	3	LQLWDTAGQER3		50258	67964.9
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	LQLYEPEWSDDMAK	LQLYEPEWSDDMAK	2	LQLYEPEWSDDMAK2	13677.8	12146.6	9200.35
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	LQLYFWK	LQLYFWK	2	LQLYFWK2	10198.3	6744.2	13353.5
O88339	O88339	EPN1_RAT	Epn1	Epsin-1	1	LQMAIEESK	LQMAIEESK	2	LQMAIEESK2	45964.2	41186.1	37432
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	LQMAIENTQGFDGVD	LQMAIENTQGFDGVD	2	LQMAIENTQGFDGVD2	14414.8	20579.3	15808.3
F1MAF5	F1MAF5	F1MAF5_RAT	Pcid2	PCI domain-containing protein 2	1	LQMASPEEK	LQMASPEEK	2	LQMASPEEK2	9405.37	7819.06	2507.5
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	LQMCVQTLEK	LQMC(UniMod:4)VQTLEK	2	LQMC(UniMod:4)VQTLEK2	8586.83	16206.8	9851.92
B4F785	B4F785	EGFLA_RAT	Egflam	Pikachurin	1	LQMDSMVIK	LQMDSMVIK	2	LQMDSMVIK2	4639.41	8407.68	
Q6P3V8	Q6P3V8	Q6P3V8_RAT	Eif4a1	ATP-dependent RNA helicase	1	LQMEAPHIIVGTPGR	LQMEAPHIIVGTPGR	2	LQMEAPHIIVGTPGR2	7955.67	3125.68	5172.85
Q6P3V8	Q6P3V8	Q6P3V8_RAT	Eif4a1	ATP-dependent RNA helicase	1	LQMEAPHIIVGTPGR	LQMEAPHIIVGTPGR	3	LQMEAPHIIVGTPGR3	182173	137675	125929
D3ZCG2	D3ZCG2;F1M5N7	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	0	LQMELMEYK	LQMELMEYK	2	LQMELMEYK2	17953.7	16901.7	17296.8
Q75Q41	Q75Q41	TOM22_RAT	Tomm22	Mitochondrial import receptor subunit TOM22 homolog	1	LQMEQQQQLQQR	LQMEQQQQLQQR	2	LQMEQQQQLQQR2	23593.2	20934.4	15741.9
Q75Q41	Q75Q41	TOM22_RAT	Tomm22	Mitochondrial import receptor subunit TOM22 homolog	1	LQMEQQQQLQQR	LQMEQQQQLQQR	3	LQMEQQQQLQQR3	15644.6	14554	16285.6
Q925Q9	Q925Q9	SH3K1_RAT	Sh3kbp1	SH3 domain-containing kinase-binding protein 1	1	LQMEVNDIKK	LQMEVNDIKK	3	LQMEVNDIKK3	7208.15	11413.7	7990.64
A0A8I6AEI1	A0A8I6AEI1	A0A8I6AEI1_RAT	Hps1	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1	1	LQMIEVPVLSDDSVPIGVLGGDYYR	LQMIEVPVLSDDSVPIGVLGGDYYR	3	LQMIEVPVLSDDSVPIGVLGGDYYR3	5783.52	5544.04	
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	LQMLDHFAECVK	LQMLDHFAEC(UniMod:4)VK	3	LQMLDHFAEC(UniMod:4)VK3	10679.7	10202.7	10495.7
D3ZKN1	D3ZKN1	D3ZKN1_RAT	Bpifa6	BPI fold containing family A, member 6	1	LQMLLLGGK	LQMLLLGGK	2	LQMLLLGGK2	15708.4	18722.8	14043.2
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	LQMLNCCIER	LQMLNC(UniMod:4)C(UniMod:4)IER	2	LQMLNC(UniMod:4)C(UniMod:4)IER2	92295.6	86887.8	94243
D3ZES7	D3ZWP6;D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	0	LQMQMDNLESR	LQMQMDNLESR	2	LQMQMDNLESR2	40818.6	22451.7	36331.8
A0A0G2JXD9	A0A0G2JXD9	A0A0G2JXD9_RAT	Dop1b	DOP1 leucine zipper like protein B	1	LQMVTVPPIAPGILK	LQMVTVPPIAPGILK	2	LQMVTVPPIAPGILK2	5018.35	6091.08	7045.94
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	LQNAADVPANMDK	LQNAADVPANMDK	2	LQNAADVPANMDK2	170608	200440	161836
B2RZ57	B2RZ57	B2RZ57_RAT	Mrpl18	Mitochondrial ribosomal protein L18	1	LQNAMTESGVMLR	LQNAMTESGVMLR	2	LQNAMTESGVMLR2	2283.12	3747.09	3596.61
P53565	P53565;A0A8I5ZR58	CUX1_RAT	Cux1	Homeobox protein cut-like 1	0	LQNDFAEK	LQNDFAEK	2	LQNDFAEK2	15308.6	15494	16140.9
D3ZXY2	D3ZXY2	D3ZXY2_RAT	Pdzd8	PDZ domain containing 8	1	LQNEIDQELEHNNSLVR	LQNEIDQELEHNNSLVR	3	LQNEIDQELEHNNSLVR3	9609.38	6433.14	
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	LQNELAHK	LQNELAHK	2	LQNELAHK2		12032	
A0A8I6A9E8	A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	1	LQNELDKYR	LQNELDKYR	3	LQNELDKYR3	18802.8	12094.3	6035.97
Q9JLT0	Q9JLT0	MYH10_RAT	Myh10	Myosin-10	1	LQNELDNVSTLLEEAEK	LQNELDNVSTLLEEAEK	3	LQNELDNVSTLLEEAEK3		3245.47	
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	LQNEVVDLQAK	LQNEVVDLQAK	2	LQNEVVDLQAK2	107941	120351	91027.4
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	LQNGLQALLISDLSNVEGK	LQNGLQALLISDLSNVEGK	3	LQNGLQALLISDLSNVEGK3	5488.67	4621.6	6170.45
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	LQNIADASPEK	LQNIADASPEK	2	LQNIADASPEK2	35642.9	28804.2	32850.6
P15651	P15651	ACADS_RAT	Acads	Short-chain specific acyl-CoA dehydrogenase, mitochondrial	1	LQNIQFK	LQNIQFK	2	LQNIQFK2	58972.3	62678.8	
Q5HZV9	Q5HZV9	PP1R7_RAT	Ppp1r7	Protein phosphatase 1 regulatory subunit 7	1	LQNLDALSNLTVLSMQSNR	LQNLDALSNLTVLSMQSNR	3	LQNLDALSNLTVLSMQSNR3	16570.9	35346.2	28198.6
P04916	P04916	RET4_RAT	Rbp4	Retinol-binding protein 4	1	LQNLDGTCADSYSFVFSR	LQNLDGTC(UniMod:4)ADSYSFVFSR	3	LQNLDGTC(UniMod:4)ADSYSFVFSR3	16292.8	17477.3	17882.3
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	LQNLNIFLVGCGAIGCEMLK	LQNLNIFLVGC(UniMod:4)GAIGC(UniMod:4)EMLK	3	LQNLNIFLVGC(UniMod:4)GAIGC(UniMod:4)EMLK3			2313.67
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	LQNLSQQHQAAVEELR	LQNLSQQHQAAVEELR	3	LQNLSQQHQAAVEELR3	14287.8	16430.5	13917.9
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	LQNLSQQHQAAVEELREK	LQNLSQQHQAAVEELREK	3	LQNLSQQHQAAVEELREK3	2648.92		
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	LQNLSYTEILK	LQNLSYTEILK	2	LQNLSYTEILK2	41471	50579.3	43648.3
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	LQNMLEEQLTK	LQNMLEEQLTK	2	LQNMLEEQLTK2	12996.8	20498.8	17185.8
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	LQNMSQK	LQNMSQK	1	LQNMSQK1			1235.48
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	LQNMSQK	LQNMSQK	2	LQNMSQK2	117928		70045.2
P62944	P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	LQNNNVYTIAK	LQNNNVYTIAK	2	LQNNNVYTIAK2	77168.6	59187	47688.3
P97612	P97612	FAAH1_RAT	Faah	Fatty-acid amide hydrolase 1	1	LQNPDLDSEALLTLPLLQLVQK	LQNPDLDSEALLTLPLLQLVQK	3	LQNPDLDSEALLTLPLLQLVQK3	9649.04		
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	LQNPSDR	LQNPSDR	2	LQNPSDR2	236681		144785
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	LQNPSDRK	LQNPSDRK	2	LQNPSDRK2			60400.6
A0A8I6A865	A0A8I6A865	A0A8I6A865_RAT	Rtl5	Retrotransposon Gag like 5	1	LQNQFLK	LQNQFLK	2	LQNQFLK2			44729.8
A0A8I6GH80	A0A8I6GH80	A0A8I6GH80_RAT	Vps4b	vesicle-fusing ATPase	1	LQNQLQGAIVIERPNVK	LQNQLQGAIVIERPNVK	3	LQNQLQGAIVIERPNVK3	8637.5	13168.6	8392.45
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	LQNQVNGTEWSWK	LQNQVNGTEWSWK	2	LQNQVNGTEWSWK2	5052.97	5284.6	
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	LQNSTLMAEFSK	LQNSTLMAEFSK	2	LQNSTLMAEFSK2	10829	6849.75	8036.92
P0C5E3	P0C5E3	PALLD_RAT	Palld	Palladin (Fragment)	1	LQNTGVADGYPVR	LQNTGVADGYPVR	2	LQNTGVADGYPVR2	9923.47	7401.22	7116.36
Q5FVN1	Q5FVN1	STBD1_RAT	Stbd1	Starch-binding domain-containing protein 1	1	LQNVGNAR	LQNVGNAR	2	LQNVGNAR2	32376.2	26688.4	31869.5
B1H264	B1H264	B1H264_RAT	Tbc1d17	TBC1 domain family, member 17	1	LQNVPELK	LQNVPELK	2	LQNVPELK2	62692.3	77115.2	65166.4
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LQNVQIALDFLK	LQNVQIALDFLK	2	LQNVQIALDFLK2	11880.2	23565.7	21113
P10868	P10868	GAMT_RAT	Gamt	Guanidinoacetate N-methyltransferase	1	LQNWALK	LQNWALK	2	LQNWALK2	20426.8	5451.73	12084
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	LQNYDENGR	LQNYDENGR	2	LQNYDENGR2	32151.2	37368.2	32894.9
D3ZZB2	D3ZZB2	D3ZZB2_RAT	Pex1	Peroxisomal ATPase PEX1	1	LQPAENLPR	LQPAENLPR	2	LQPAENLPR2	20344.5	16683.6	24395.5
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	LQPAEVDAAVMK	LQPAEVDAAVMK	2	LQPAEVDAAVMK2	17245.1	12407.1	11222.1
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	LQPDMVPLGHHK	LQPDMVPLGHHK	2	LQPDMVPLGHHK2	67224.2	48029.8	36481.7
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	LQPDMVPLGHHK	LQPDMVPLGHHK	3	LQPDMVPLGHHK3	656318	593012	580163
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	LQPDQQVVINCAIIR	LQPDQQVVINC(UniMod:4)AIIR	2	LQPDQQVVINC(UniMod:4)AIIR2	172437	139006	155247
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	LQPDQQVVINCAIIR	LQPDQQVVINC(UniMod:4)AIIR	3	LQPDQQVVINC(UniMod:4)AIIR3	96095.4	73393.9	97436.1
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	LQPECEFLSGK	LQPEC(UniMod:4)EFLSGK	2	LQPEC(UniMod:4)EFLSGK2	49561.8	54384	53866.8
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	LQPFLQR	LQPFLQR	2	LQPFLQR2	285248	252061	157276
A0A8I6ACU9	A0A8I6ACU9	A0A8I6ACU9_RAT	Timm50	Mitochondrial import inner membrane translocase subunit TIM50	1	LQPFNGVALRPWDGNSDDR	LQPFNGVALRPWDGNSDDR	3	LQPFNGVALRPWDGNSDDR3	35072.3	47977.9	47941
Q66H91	Q66H91	GIT2_RAT	Git2	ARF GTPase-activating protein GIT2	1	LQPFPTHIGR	LQPFPTHIGR	3	LQPFPTHIGR3	28396.2	32291.5	33478.5
F1LWW1	F1LWW1	F1LWW1_RAT	AABR07061136.1	Ig-like domain-containing protein	1	LQPGAPSR	LQPGAPSR	2	LQPGAPSR2	44066.6	41025.3	30866.9
A0A0G2K1L5	A0A0G2K1L5	A0A0G2K1L5_RAT	Reep2	Receptor expression-enhancing protein	1	LQPGPVGLLDTIEDLGDEPALSLR	LQPGPVGLLDTIEDLGDEPALSLR	3	LQPGPVGLLDTIEDLGDEPALSLR3		12805.5	13363.4
D3ZRX9	D3ZRX9	D3ZRX9_RAT	Cnn2	Calponin	1	LQPGSVPK	LQPGSVPK	1	LQPGSVPK1	63780.8	42503.8	34407.2
D3ZRX9	D3ZRX9	D3ZRX9_RAT	Cnn2	Calponin	1	LQPGSVPK	LQPGSVPK	2	LQPGSVPK2	2.63403e+06	2.64129e+06	2.75359e+06
P08461	A0A8I6B5J2;P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	0	LQPHEFQGGTFTISNLGMFGIK	LQPHEFQGGTFTISNLGMFGIK	3	LQPHEFQGGTFTISNLGMFGIK3	8006.05		13269.7
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	LQPHPGLEK	LQPHPGLEK	2	LQPHPGLEK2	181106	144411	153979
Q6DGG0	M0RB67;Q6DGG0	PPID_RAT	Ppid	Peptidyl-prolyl cis-trans isomerase D	0	LQPIALSCVLNIGACK	LQPIALSC(UniMod:4)VLNIGAC(UniMod:4)K	2	LQPIALSC(UniMod:4)VLNIGAC(UniMod:4)K2	3378.54	6130.49	
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	LQPLDFK	LQPLDFK	1	LQPLDFK1	19376.2	15337.6	12022.7
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	LQPLDFK	LQPLDFK	2	LQPLDFK2	1.9481e+06	1.72931e+06	1.75633e+06
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	LQPLDFKENPEQSR	LQPLDFKENPEQSR	2	LQPLDFKENPEQSR2	8119.95	14244.6	6555.65
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	LQPLSPVPSDIEISR	LQPLSPVPSDIEISR	2	LQPLSPVPSDIEISR2	53554.2	71353.7	51606.9
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	LQPPVYGK	LQPPVYGK	1	LQPPVYGK1	316844	288799	270914
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	LQPPVYGK	LQPPVYGK	2	LQPPVYGK2	7.43113e+06	7.78964e+06	8.86522e+06
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	LQPQITMIPPSAQPPR	LQPQITMIPPSAQPPR	2	LQPQITMIPPSAQPPR2	38284.6	34391.3	33606.2
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	LQPQITMIPPSAQPPR	LQPQITMIPPSAQPPR	3	LQPQITMIPPSAQPPR3	49434.5	56657	54334.8
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	LQPQNLVGTSTVNSDSPASDPTVFHK	LQPQNLVGTSTVNSDSPASDPTVFHK	3	LQPQNLVGTSTVNSDSPASDPTVFHK3	7533.13	8685.53	11222.3
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LQPSFEALK	LQPSFEALK	2	LQPSFEALK2	53072.3	83480.3	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LQPSFEALKR	LQPSFEALKR	3	LQPSFEALKR3	81691	62176.1	62042.3
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	LQPSQLSSNLYTK	LQPSQLSSNLYTK	2	LQPSQLSSNLYTK2	8343.12	9471.38	7964.94
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	LQPSSSSETGLDPFPSR	LQPSSSSETGLDPFPSR	2	LQPSSSSETGLDPFPSR2	27077.1	14743.5	11741.4
P54777	P54777	PEX6_RAT	Pex6	Peroxisomal ATPase PEX6	1	LQPSVSEQELLR	LQPSVSEQELLR	2	LQPSVSEQELLR2	7822.94	8482.35	14309.6
D3ZZC1	D3ZZC1	D3ZZC1_RAT	Txndc5	protein disulfide-isomerase	1	LQPTWNDLGDK	LQPTWNDLGDK	2	LQPTWNDLGDK2	67820.5	47100.3	40338.1
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	LQPVTEVK	LQPVTEVK	2	LQPVTEVK2	53104.8	40739.7	37924.4
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	LQPYTGK	LQPYTGK	2	LQPYTGK2	101830	113202	112901
D4A415	D4A415	D4A415_RAT	Abraxas2	Abraxas 2, BRISC complex subunit	1	LQQALLSR	LQQALLSR	2	LQQALLSR2	33860.3	58247.6	49958.1
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	LQQALTCLR	LQQALTC(UniMod:4)LR	2	LQQALTC(UniMod:4)LR2	38270.9	31525.4	34166.6
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	LQQALTDAENEVK	LQQALTDAENEVK	2	LQQALTDAENEVK2	11314.8	11911.3	7203.68
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	LQQALTDAENEVKR	LQQALTDAENEVKR	3	LQQALTDAENEVKR3	5439.29	11981.1	5724.8
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	LQQAMEMVGFLPATK	LQQAMEMVGFLPATK	2	LQQAMEMVGFLPATK2	11513.6	10027.7	14165.9
B2GV14	B2GV14	B2GV14_RAT	Txlna	Taxilin alpha	1	LQQAQEMLK	LQQAQEMLK	2	LQQAQEMLK2	7856.28	8401.14	9602.5
A0A0G2K8D1	A0A0G2K8D1	A0A0G2K8D1_RAT	Mospd2	Motile sperm domain containing 2	1	LQQDDNWVESYLHWR	LQQDDNWVESYLHWR	3	LQQDDNWVESYLHWR3	8396.97	8964.8	7384.87
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	LQQDIFQFQK	LQQDIFQFQK	2	LQQDIFQFQK2	124922	128461	106040
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	LQQDVHNGVNQASK	LQQDVHNGVNQASK	2	LQQDVHNGVNQASK2	1491.69		988.486
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	LQQDVHNGVNQASK	LQQDVHNGVNQASK	3	LQQDVHNGVNQASK3	8710.39	6726.34	14450
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	LQQEATEHITEIEER	LQQEATEHITEIEER	2	LQQEATEHITEIEER2	6786.74	8796.45	9468.29
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	LQQEATEHITEIEER	LQQEATEHITEIEER	3	LQQEATEHITEIEER3	139323	113487	134226
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	LQQEDKFQSNWK	LQQEDKFQSNWK	3	LQQEDKFQSNWK3	2962.42	16583.9	15143.7
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	LQQEETQLEQSIQAGR	LQQEETQLEQSIQAGR	2	LQQEETQLEQSIQAGR2	6622.25	6684.05	5163.69
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	LQQEETQLEQSIQAGR	LQQEETQLEQSIQAGR	3	LQQEETQLEQSIQAGR3	4039.66	6852.12	1913.21
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	LQQEGVQK	LQQEGVQK	2	LQQEGVQK2			10392.9
Q5BJT7	Q5BJT7	CCD93_RAT	Ccdc93	Coiled-coil domain-containing protein 93	1	LQQEIEILK	LQQEIEILK	2	LQQEIEILK2	14742.4	13442.1	
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LQQELDDLLVDLDHQR	LQQELDDLLVDLDHQR	2	LQQELDDLLVDLDHQR2	1.19186e+06	490721	502604
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LQQELDDLLVDLDHQR	LQQELDDLLVDLDHQR	3	LQQELDDLLVDLDHQR3	8.225e+06	9.75154e+06	8.7886e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LQQELDDLLVDLDHQR	LQQELDDLLVDLDHQR	4	LQQELDDLLVDLDHQR4	2956.84		
Q9JLT0	Q9JLT0	MYH10_RAT	Myh10	Myosin-10	1	LQQELDDLTVDLDHQR	LQQELDDLTVDLDHQR	3	LQQELDDLTVDLDHQR3	2445.53	5101.05	2334.71
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	LQQELEAANQSLAELR	LQQELEAANQSLAELR	2	LQQELEAANQSLAELR2	12832.4	6926.26	10989.4
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	LQQELEAANQSLAELR	LQQELEAANQSLAELR	3	LQQELEAANQSLAELR3	9352.17	20710.6	9416.86
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	LQQELEFLEVQEEYIK	LQQELEFLEVQEEYIK	3	LQQELEFLEVQEEYIK3	22040.3	11217.9	16061.4
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	LQQELEFLEVQEEYIKDEQK	LQQELEFLEVQEEYIKDEQK	3	LQQELEFLEVQEEYIKDEQK3	11613.1	7945.94	12109.7
O88902	O88902	PTN23_RAT	Ptpn23	Tyrosine-protein phosphatase non-receptor type 23 (Fragment)	1	LQQELESFR	LQQELESFR	2	LQQELESFR2	10786	11559.2	5067.95
F1LR42	F1LR42	F1LR42_RAT	Rufy1	RUN and FYVE domain containing 1	1	LQQELSGR	LQQELSGR	2	LQQELSGR2	22073.5	20095.9	19872.9
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	LQQEMDSLTFR	LQQEMDSLTFR	2	LQQEMDSLTFR2	7461.38	11451.5	4251.08
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	LQQENER	LQQENER	2	LQQENER2			21571.5
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	LQQENLQIVTQLQK	LQQENLQIVTQLQK	2	LQQENLQIVTQLQK2	13694.2	15186	21787.2
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	LQQENLQIVTQLQK	LQQENLQIVTQLQK	3	LQQENLQIVTQLQK3	11339.9	15870.8	16793
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	LQQENSILR	LQQENSILR	2	LQQENSILR2	71233	64464.7	85715.9
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	LQQETAQLEESVESGK	LQQETAQLEESVESGK	2	LQQETAQLEESVESGK2	7791.47	7365.58	10405.8
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	LQQETAQLEESVESGK	LQQETAQLEESVESGK	3	LQQETAQLEESVESGK3	24530.5	21889.5	25250.7
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	LQQFFNER	LQQFFNER	2	LQQFFNER2	47547.8	30700.5	32648
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LQQFLRDLDDFQSWLSR	LQQFLRDLDDFQSWLSR	3	LQQFLRDLDDFQSWLSR3	6844.25	4425.4	8785.4
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LQQFVEHK	LQQFVEHK	2	LQQFVEHK2	11205.9	15704.7	8301.71
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	LQQGSESPMMIGELR	LQQGSESPMMIGELR	2	LQQGSESPMMIGELR2	4652.15	3868.54	9745.22
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	LQQGSESPMMIGELR	LQQGSESPMMIGELR	3	LQQGSESPMMIGELR3	4021.61	4984.32	11411.2
D4A7R3	D4A7R3	D4A7R3_RAT	Nup205	Nucleoporin 205	1	LQQGSLELLR	LQQGSLELLR	2	LQQGSLELLR2		8072.03	5179.29
D3ZBX9	D3ZBX9	D3ZBX9_RAT	Ccdc92	Coiled-coil domain containing 92	1	LQQHCTDLTYELTLK	LQQHC(UniMod:4)TDLTYELTLK	3	LQQHC(UniMod:4)TDLTYELTLK3	16327.6	9908.24	9778.12
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	LQQHGIPVFIFSAGIGDVLEEVIR	LQQHGIPVFIFSAGIGDVLEEVIR	3	LQQHGIPVFIFSAGIGDVLEEVIR3		4031.73	
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	LQQIAAALENK	LQQIAAALENK	2	LQQIAAALENK2	9129.23	8730.86	4566.63
Q63356	D4A7X9;Q05096;Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	0	LQQIFIELTLK	LQQIFIELTLK	2	LQQIFIELTLK2	15840.2		
Q4V7D2	Q4V7D2	ROGDI_RAT	Rogdi	Protein rogdi homolog	1	LQQIQDAR	LQQIQDAR	2	LQQIQDAR2	9264.52	14700.9	14330.2
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	LQQKPFTYLPFGAGPR	LQQKPFTYLPFGAGPR	2	LQQKPFTYLPFGAGPR2	11643.7	9987.43	15559.3
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	LQQKPFTYLPFGAGPR	LQQKPFTYLPFGAGPR	3	LQQKPFTYLPFGAGPR3	386685	414949	408983
B1WBR8	B1WBR8	B1WBR8_RAT	Fbxl4	F-box and leucine-rich repeat protein 4	1	LQQLDILGTR	LQQLDILGTR	2	LQQLDILGTR2	3438.37	3091.93	3382.97
P30839	P30839	AL3A2_RAT	Aldh3a2	Aldehyde dehydrogenase family 3 member A2	1	LQQLEALR	LQQLEALR	2	LQQLEALR2	38105.3	33184.8	32962.9
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	LQQLEEQLR	LQQLEEQLR	2	LQQLEEQLR2	301967	329483	486294
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	LQQLEEQLREHAQLMSQHSSLLGR	LQQLEEQLREHAQLMSQHSSLLGR	4	LQQLEEQLREHAQLMSQHSSLLGR4	17225.5	29856.3	33500.3
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	LQQLFIELTLK	LQQLFIELTLK	2	LQQLFIELTLK2		25820.5	22127.8
Q62812	Q63862;Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	LQQLFNHTMFILEQEEYQR	LQQLFNHTMFILEQEEYQR	3	LQQLFNHTMFILEQEEYQR3	39837.3	65435.7	51048.6
Q62812	Q63862;Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	LQQLFNHTMFILEQEEYQR	LQQLFNHTMFILEQEEYQR	4	LQQLFNHTMFILEQEEYQR4	10568.8	20206.7	12630.5
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LQQLFRDVEDEETWIR	LQQLFRDVEDEETWIR	3	LQQLFRDVEDEETWIR3	43211.6	52388	51864.7
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	LQQLGER	LQQLGER	2	LQQLGER2	67587.1	70981.6	73696.9
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	LQQLGTVYDVSHYNALLK	LQQLGTVYDVSHYNALLK	3	LQQLGTVYDVSHYNALLK3	24297.3	13058.6	17438.2
D3ZPA1	D3ZPA1	D3ZPA1_RAT	Gcc1	GRIP and coiled-coil domain containing 1	1	LQQLHQQELER	LQQLHQQELER	3	LQQLHQQELER3	6994.07	7042.51	9609.4
Q5RJR8	Q5RJR8	LRC59_RAT	Lrrc59	Leucine-rich repeat-containing protein 59	1	LQQLPADFGR	LQQLPADFGR	2	LQQLPADFGR2	258573	262426	274882
D3ZCK4	D3ZCK4	D3ZCK4_RAT	Def6	DEF6 guanine nucleotide exchange factor	1	LQQLQEEK	LQQLQEEK	2	LQQLQEEK2			26523.5
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	LQQLSLK	LQQLSLK	2	LQQLSLK2	501513	488094	458598
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	LQQLTAMWLSDNQSK	LQQLTAMWLSDNQSK	2	LQQLTAMWLSDNQSK2	19290.5	12941.9	15749.5
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	LQQLTAMWLSDNQSKPLIPLQK	LQQLTAMWLSDNQSKPLIPLQK	3	LQQLTAMWLSDNQSKPLIPLQK3	163828	186882	219827
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	LQQLTAMWLSDNQSKPLIPLQK	LQQLTAMWLSDNQSKPLIPLQK	4	LQQLTAMWLSDNQSKPLIPLQK4	14094.6	17547.6	12463.5
Q5M853	Q5M853	KXDL1_RAT	Kxd1	KxDL motif-containing protein 1	1	LQQMSER	LQQMSER	2	LQQMSER2		22588.3	
Q04753	Q04753	ICLN_RAT	Clns1a	Methylosome subunit pICln	1	LQQPDTEAVLNGK	LQQPDTEAVLNGK	2	LQQPDTEAVLNGK2	62264.3	35751.1	53379
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	LQQPEAASGVLEYAMK	LQQPEAASGVLEYAMK	2	LQQPEAASGVLEYAMK2	11739.3	12820.2	12178.1
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	LQQQAAQAAQELAVEK	LQQQAAQAAQELAVEK	2	LQQQAAQAAQELAVEK2	9820	7819.39	11749
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	LQQQAAQAAQELAVEK	LQQQAAQAAQELAVEK	3	LQQQAAQAAQELAVEK3	15761.5	7926.65	
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	LQQQCQFITDGYAAHLAQLK	LQQQC(UniMod:4)QFITDGYAAHLAQLK	3	LQQQC(UniMod:4)QFITDGYAAHLAQLK3	8268.41	13540	3885.4
Q9WV63	Q9WV63;A0A8I6A456	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	0	LQQQELR	LQQQELR	2	LQQQELR2	884604	1.00899e+06	901177
M0RCS2	M0RCS2	M0RCS2_RAT	Tbl2	Transducin (beta)-like 2	1	LQQQLTQAQEALK	LQQQLTQAQEALK	2	LQQQLTQAQEALK2	13623.1	15838.4	12305.9
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	LQQQSGAWGPSK	LQQQSGAWGPSK	2	LQQQSGAWGPSK2	23749.1	21777.3	23991.7
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	LQQSAAIQPLVSCPR	LQQSAAIQPLVSC(UniMod:4)PR	2	LQQSAAIQPLVSC(UniMod:4)PR2	7473.83	6562.88	5649.77
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	LQQSAAIQPLVSCPR	LQQSAAIQPLVSC(UniMod:4)PR	3	LQQSAAIQPLVSC(UniMod:4)PR3	7067.14	3322.78	9629.23
A0A8I6GB90	A0A8I6GB90	A0A8I6GB90_RAT	ENSRNOG00000069751	Ig-like domain-containing protein	1	LQQSGAELVKPGASVK	LQQSGAELVKPGASVK	3	LQQSGAELVKPGASVK3	53092.6	42494.2	38535.7
A0A8I6AI27;A0A8I6AJQ0	A0A8I6AI27;A0A8I6AJQ0;A0A8I6G2R9	A0A8I6AI27_RAT;A0A8I6AJQ0_RAT	ENSRNOG00000063171;ENSRNOG00000065115	Ig-like domain-containing protein	0	LQQSGDELVR	LQQSGDELVR	2	LQQSGDELVR2			6868.33
A0A8I6AI27;A0A8I6AJQ0	A0A8I6AI27;A0A8I6AJQ0;A0A8I6G2R9	A0A8I6AI27_RAT;A0A8I6AJQ0_RAT	ENSRNOG00000063171;ENSRNOG00000065115	Ig-like domain-containing protein	0	LQQSGDELVRPGASVK	LQQSGDELVRPGASVK	3	LQQSGDELVRPGASVK3	118558	111510	128674
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LQQSHPLSANQIQVK	LQQSHPLSANQIQVK	2	LQQSHPLSANQIQVK2	30718.6	27683.1	21246.4
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LQQSHPLSANQIQVK	LQQSHPLSANQIQVK	3	LQQSHPLSANQIQVK3	245678	223429	219220
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	LQQSLMEWR	LQQSLMEWR	2	LQQSLMEWR2	6815.84	9836.12	10880.6
A0A8I5ZXL6	A0A8I5ZXL6	A0A8I5ZXL6_RAT	Plekha7	Pleckstrin homology domain containing A7	1	LQQSSTIAPYVTLR	LQQSSTIAPYVTLR	2	LQQSSTIAPYVTLR2	3052.13	9704.43	7631.89
Q4KLJ8	Q4KLJ8	PDCL3_RAT	Pdcl3	Phosducin-like protein 3	1	LQQSVVK	LQQSVVK	2	LQQSVVK2	196337	250818	221412
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	LQQTEAELR	LQQTEAELR	2	LQQTEAELR2	52582.6	54229.6	47888.4
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	LQQTEAELRK	LQQTEAELRK	2	LQQTEAELRK2		1807.23	6697.43
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	LQQTEAELRK	LQQTEAELRK	3	LQQTEAELRK3	20260.3	25899.5	17104.2
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	LQQTLNALNK	LQQTLNALNK	2	LQQTLNALNK2	46271	47057.1	48843.5
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	LQQTLNALNKK	LQQTLNALNKK	2	LQQTLNALNKK2	1303.37		
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	LQQTLNALNKK	LQQTLNALNKK	3	LQQTLNALNKK3	7018.35	15569	11864.3
P63045	P63045	VAMP2_RAT	Vamp2	Vesicle-associated membrane protein 2	1	LQQTQAQVDEVVDIMR	LQQTQAQVDEVVDIMR	2	LQQTQAQVDEVVDIMR2	5192.64	3924.24	7379.51
P63045	P63045	VAMP2_RAT	Vamp2	Vesicle-associated membrane protein 2	1	LQQTQAQVDEVVDIMR	LQQTQAQVDEVVDIMR	3	LQQTQAQVDEVVDIMR3	16246.3	21600.5	17797.4
P63025	P63025	VAMP3_RAT	Vamp3	Vesicle-associated membrane protein 3	1	LQQTQNQVDEVVDIMR	LQQTQNQVDEVVDIMR	2	LQQTQNQVDEVVDIMR2	40024.7	33090.8	32203.5
P63025	P63025	VAMP3_RAT	Vamp3	Vesicle-associated membrane protein 3	1	LQQTQNQVDEVVDIMR	LQQTQNQVDEVVDIMR	3	LQQTQNQVDEVVDIMR3	165328	163012	192805
A0A8I6AUZ6	A0A8I6AUZ6	A0A8I6AUZ6_RAT	Rarres2	Retinoic acid receptor responder protein 2	1	LQQTSCLK	LQQTSC(UniMod:4)LK	2	LQQTSC(UniMod:4)LK2	42659.7	36193.9	31756
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	LQQTYSALNSK	LQQTYSALNSK	2	LQQTYSALNSK2	66741.6	77094.8	57721.8
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LQQVHQYMK	LQQVHQYMK	2	LQQVHQYMK2	96045.5	98906	80654
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LQQVHQYMK	LQQVHQYMK	3	LQQVHQYMK3	149532	212748	136344
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LQQVISR	LQQVISR	2	LQQVISR2	24816.8	19036.1	29872.2
Q6AY30	Q6AY30	SCPDL_RAT	Sccpdh	Saccharopine dehydrogenase-like oxidoreductase	1	LQQVLEK	LQQVLEK	2	LQQVLEK2	152724	147429	160908
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	LQQVLQMESHIQSTSDR	LQQVLQMESHIQSTSDR	3	LQQVLQMESHIQSTSDR3	154722	211669	155670
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LQQVNGLGQGLIQSAGK	LQQVNGLGQGLIQSAGK	2	LQQVNGLGQGLIQSAGK2	10220.8	15228.3	7580.64
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LQQVNGLGQGLIQSAGK	LQQVNGLGQGLIQSAGK	3	LQQVNGLGQGLIQSAGK3	17640.3	15505.2	22944.4
Q505J8	Q505J8	SYFA_RAT	Farsa	Phenylalanine--tRNA ligase alpha subunit	1	LQQVQAGQAEK	LQQVQAGQAEK	2	LQQVQAGQAEK2	8524.81	7772.37	6502.53
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	LQQVSRPTFFAR	LQQVSRPTFFAR	3	LQQVSRPTFFAR3	238942	406084	283445
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	LQQYEEIIQSTEEFEK	LQQYEEIIQSTEEFEK	3	LQQYEEIIQSTEEFEK3	2986.03	4794.28	4022.04
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	LQQYSQNSQGAFGTR	LQQYSQNSQGAFGTR	2	LQQYSQNSQGAFGTR2	6459.11	3966.93	5337.64
A0A8I5ZYW3	A0A8I5ZYW3	A0A8I5ZYW3_RAT	Lsp1	Lymphocyte-specific protein 1	1	LQQYTQATESAGR	LQQYTQATESAGR	2	LQQYTQATESAGR2	53001.6	51470.3	42282.9
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	LQREEEEAFASSQSSQGAQSLTFSK	LQREEEEAFASSQSSQGAQSLTFSK	3	LQREEEEAFASSQSSQGAQSLTFSK3	8703.11	10962.7	14222.7
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LQRELEDATETADAMNR	LQRELEDATETADAMNR	3	LQRELEDATETADAMNR3	11808.4	11538.6	20629.4
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LQRELEDATETADAMNREVSSLK	LQRELEDATETADAMNREVSSLK	4	LQRELEDATETADAMNREVSSLK4		8743.29	10765.3
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	LQRPETWER	LQRPETWER	3	LQRPETWER3	24920.4	14194	22116.7
B2GV87	B2GV87	PTPRE_RAT	Ptpre	Receptor-type tyrosine-protein phosphatase epsilon	1	LQRPHMVQTLEQYEFCYK	LQRPHMVQTLEQYEFC(UniMod:4)YK	3	LQRPHMVQTLEQYEFC(UniMod:4)YK3	6490.2		2343.32
B2GV87	B2GV87	PTPRE_RAT	Ptpre	Receptor-type tyrosine-protein phosphatase epsilon	1	LQRPHMVQTLEQYEFCYK	LQRPHMVQTLEQYEFC(UniMod:4)YK	4	LQRPHMVQTLEQYEFC(UniMod:4)YK4	6496.7	19788.1	29012.4
Q66HA4	Q66HA4	TAXB1_RAT	Tax1bp1	Tax1-binding protein 1 homolog	1	LQSCLADKENLHR	LQSC(UniMod:4)LADKENLHR	4	LQSC(UniMod:4)LADKENLHR4	4769.59	3745.95	
Q9QYW3	Q9QYW3	PHOCN_RAT	Mob4	MOB-like protein phocein	1	LQSECHPDTCTQMTATEQWIFLCAAHK	LQSEC(UniMod:4)HPDTC(UniMod:4)TQMTATEQWIFLC(UniMod:4)AAHK	4	LQSEC(UniMod:4)HPDTC(UniMod:4)TQMTATEQWIFLC(UniMod:4)AAHK4	16177.1	10479	19667.5
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	LQSEHANSEATINQLR	LQSEHANSEATINQLR	3	LQSEHANSEATINQLR3	17675.9	17399	24393.5
P08081	P08081	CLCA_RAT	Clta	Clathrin light chain A	1	LQSEPESIR	LQSEPESIR	2	LQSEPESIR2	248062	237446	223659
P08081	P08081	CLCA_RAT	Clta	Clathrin light chain A	1	LQSEPESIRK	LQSEPESIRK	2	LQSEPESIRK2	121839	89282.3	97374.5
P08081	P08081	CLCA_RAT	Clta	Clathrin light chain A	1	LQSEPESIRK	LQSEPESIRK	3	LQSEPESIRK3	709908	690630	806243
Q568Z6	Q568Z6	IST1_RAT	Ist1	IST1 homolog	1	LQSEVAELK	LQSEVAELK	2	LQSEVAELK2	38193	27599.1	40770.8
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	LQSFAVTER	LQSFAVTER	2	LQSFAVTER2	13506.5	8256.26	14913.9
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	LQSFNEYR	LQSFNEYR	2	LQSFNEYR2	550617	597515	642823
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	LQSFNEYRK	LQSFNEYRK	2	LQSFNEYRK2	35909.2	29558.4	30255.7
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	LQSFNEYRK	LQSFNEYRK	3	LQSFNEYRK3	226519	258586	255374
P05065	Q6AY07;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	LQSIGTENTEENR	LQSIGTENTEENR	2	LQSIGTENTEENR2	165260	123853	120144
P05065	Q6AY07;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	LQSIGTENTEENRR	LQSIGTENTEENRR	3	LQSIGTENTEENRR3	505667	425578	443421
A0A8I5ZYB9	A0A8I5ZYB9	A0A8I5ZYB9_RAT	Lrrc32	Leucine rich repeat containing 32	1	LQSILVSPLSFYTALR	LQSILVSPLSFYTALR	2	LQSILVSPLSFYTALR2	25950.5	15205.5	16136.1
A0A8I5ZYB9	A0A8I5ZYB9	A0A8I5ZYB9_RAT	Lrrc32	Leucine rich repeat containing 32	1	LQSILVSPLSFYTALR	LQSILVSPLSFYTALR	3	LQSILVSPLSFYTALR3	5605.27	2537.49	6425.19
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	LQSLEQEK	LQSLEQEK	2	LQSLEQEK2	57227.3	63560.7	69541.7
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	LQSLEVGTEWDPK	LQSLEVGTEWDPK	2	LQSLEVGTEWDPK2	144962	153855	113090
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	LQSLEVGTEWDPKER	LQSLEVGTEWDPKER	3	LQSLEVGTEWDPKER3	17227.4	14417.4	20067.5
A0A8J8XL70	A0A8J8XL70	A0A8J8XL70_RAT	Serpinf1	Serpin family F member 1	1	LQSLFESPDFSK	LQSLFESPDFSK	2	LQSLFESPDFSK2	190059	162847	147360
Q80WD1	Q80WD1	R4RL2_RAT	Rtn4rl2	Reticulon-4 receptor-like 2	1	LQSLHLYR	LQSLHLYR	2	LQSLHLYR2	5969.49		
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	LQSLLAK	LQSLLAK	2	LQSLLAK2	95891.2	77814.7	101018
Q5FVQ9	Q5FVQ9	TBCE_RAT	Tbce	Tubulin-specific chaperone E	1	LQSLQALSCAR	LQSLQALSC(UniMod:4)AR	2	LQSLQALSC(UniMod:4)AR2	8858.98	10497.1	11175.9
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	LQSLQHEYK	LQSLQHEYK	2	LQSLQHEYK2	12374.1	8318.89	12597.6
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	LQSLQHEYK	LQSLQHEYK	3	LQSLQHEYK3	42270	53316.9	42608.3
P11915	P11915	SCP2_RAT	Scp2	Sterol carrier protein 2	1	LQSLQLQPDK	LQSLQLQPDK	2	LQSLQLQPDK2	162870	160764	148265
Q66H91	Q66H91	GIT2_RAT	Git2	ARF GTPase-activating protein GIT2	1	LQSLSNHLFEELAMDVYDEVDRR	LQSLSNHLFEELAMDVYDEVDRR	4	LQSLSNHLFEELAMDVYDEVDRR4	7985	5545.57	3765.34
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	LQSLTENLTK	LQSLTENLTK	2	LQSLTENLTK2	26910.2	30321.1	30514.2
D4ADT7	D4ADT7	D4ADT7_RAT	Nod1	Nucleotide-binding oligomerization domain containing 1	1	LQSLWASGR	LQSLWASGR	2	LQSLWASGR2	20905.5	18263.3	27888.1
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	LQSLYFK	LQSLYFK	2	LQSLYFK2	210203	200455	227005
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	LQSMDTSGLPEEHLK	LQSMDTSGLPEEHLK	2	LQSMDTSGLPEEHLK2	1101.87		2425.43
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	LQSMDTSGLPEEHLK	LQSMDTSGLPEEHLK	3	LQSMDTSGLPEEHLK3	97160.8	91084.6	104123
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	LQSNIQYITR	LQSNIQYITR	2	LQSNIQYITR2	40046.6	47283.5	51702.3
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	LQSQLGVAEAVLGEHK	LQSQLGVAEAVLGEHK	2	LQSQLGVAEAVLGEHK2	10740.8	12116.9	6714.23
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	LQSQLGVAEAVLGEHK	LQSQLGVAEAVLGEHK	3	LQSQLGVAEAVLGEHK3	146117	189630	158781
P21575	P21575	DYN1_RAT	Dnm1	Dynamin-1	1	LQSQLLSIEK	LQSQLLSIEK	2	LQSQLLSIEK2	167345	152367	159256
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	LQSQLLSLEK	LQSQLLSLEK	2	LQSQLLSLEK2	167345	152367	159256
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	LQSQLLSLEKEVEEYK	LQSQLLSLEKEVEEYK	3	LQSQLLSLEKEVEEYK3	19603.3	4971.26	17431
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LQSQLQENEEFQK	LQSQLQENEEFQK	2	LQSQLQENEEFQK2	15963.9	11441.6	7556.24
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	LQSQQTDTDGGR	LQSQQTDTDGGR	2	LQSQQTDTDGGR2			11229.2
Q3MIE4	Q3MIE4	VAT1_RAT	Vat1	Synaptic vesicle membrane protein VAT-1 homolog	1	LQSRPAVPPAPGPGQVTLR	LQSRPAVPPAPGPGQVTLR	3	LQSRPAVPPAPGPGQVTLR3	31504.5	45946.4	55070.1
Q6PEC4	Q6PEC4	SKP1_RAT	Skp1	S-phase kinase-associated protein 1	1	LQSSDGEIFEVDVEIAK	LQSSDGEIFEVDVEIAK	2	LQSSDGEIFEVDVEIAK2	9282.91	2233.41	3970.43
Q5FVJ0	Q5FVJ0	RUFY3_RAT	Rufy3	Protein RUFY3	1	LQSSDLGVK	LQSSDLGVK	2	LQSSDLGVK2	15149.5	27039.8	9649.78
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	LQSSEVEVK	LQSSEVEVK	2	LQSSEVEVK2	68343.2	66039	174342
P52303	P52303	AP1B1_RAT	Ap1b1	AP-1 complex subunit beta-1	1	LQSSNIFTVAK	LQSSNIFTVAK	2	LQSSNIFTVAK2	68953.5	78452.5	61193.4
Q3B7U1	Q3B7U1	Q3B7U1_RAT	Maged2	MAGE family member D2	1	LQSSQEPEAPPPR	LQSSQEPEAPPPR	2	LQSSQEPEAPPPR2	29524.2	17658.5	45046.3
Q3B7U1	Q3B7U1	Q3B7U1_RAT	Maged2	MAGE family member D2	1	LQSSQEPEAPPPR	LQSSQEPEAPPPR	3	LQSSQEPEAPPPR3	16285.9	18410.7	18622.6
A0A0G2JUH8	A0A0G2JUH8	A0A0G2JUH8_RAT	Snx13	Sorting nexin 13	1	LQSTQAPSLQK	LQSTQAPSLQK	2	LQSTQAPSLQK2	7603.92	3881.44	
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	LQSVLGK	LQSVLGK	1	LQSVLGK1	1772.94	3076.03	4445.52
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	LQSVMPLVDPNSPVNAK	LQSVMPLVDPNSPVNAK	2	LQSVMPLVDPNSPVNAK2	40338.5	50081.7	28088.9
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	LQSVMPLVDPNSPVNAK	LQSVMPLVDPNSPVNAK	3	LQSVMPLVDPNSPVNAK3	16997.7	20885	17486.2
Q5M7T7	Q5M7T7	Q5M7T7_RAT	Pla2g7	Phospholipase A2 group VII	1	LQSVMSAVSAGR	LQSVMSAVSAGR	2	LQSVMSAVSAGR2	160427	153973	154942
A0A0G2K098	A0A0G2K098	A0A0G2K098_RAT	Mcc	MCC regulator of WNT signaling pathway	1	LQSVQATGPSSPGR	LQSVQATGPSSPGR	2	LQSVQATGPSSPGR2	4924.57	4085.67	2827.7
Q561S0	A0A1W2Q6F8;Q561S0	NDUAA_RAT	Ndufa10	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial	0	LQSWLYASR	LQSWLYASR	2	LQSWLYASR2	61230.5	50722.1	72114.1
G3V965	G3V965	G3V965_RAT	Agpat5	1-acylglycerol-3-phosphate O-acyltransferase 5	1	LQSYVNAGTPMYLVIFPEGTR	LQSYVNAGTPMYLVIFPEGTR	3	LQSYVNAGTPMYLVIFPEGTR3	29456.6	33759.6	33262.8
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LQTASDESYKDPTNIQSK	LQTASDESYKDPTNIQSK	3	LQTASDESYKDPTNIQSK3	1.00717e+06	1.17175e+06	1.09891e+06
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LQTAYAGEK	LQTAYAGEK	2	LQTAYAGEK2	102235	123182	116338
D4A758	D4A758	D4A758_RAT	Lrrc8b	Leucine rich repeat containing 8 VRAC subunit B	1	LQTCLDKC	LQTC(UniMod:4)LDKC(UniMod:4)	2	LQTC(UniMod:4)LDKC(UniMod:4)2	8975.18	5099.42	4735.33
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	LQTCLQALELAVDQK	LQTC(UniMod:4)LQALELAVDQK	2	LQTC(UniMod:4)LQALELAVDQK2	11950.6	7189.63	9013.57
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	LQTCLQALELAVDQK	LQTC(UniMod:4)LQALELAVDQK	3	LQTC(UniMod:4)LQALELAVDQK3	11968.1	14097.1	10269.9
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	LQTDSNSWDEHVFELVLPK	LQTDSNSWDEHVFELVLPK	3	LQTDSNSWDEHVFELVLPK3	8726.74	9569.97	14548.2
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	LQTEGDGIYTLNSEK	LQTEGDGIYTLNSEK	2	LQTEGDGIYTLNSEK2	324796	228875	248510
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	LQTEGDGIYTLNSEK	LQTEGDGIYTLNSEK	3	LQTEGDGIYTLNSEK3	76015.7	62063.3	52539.6
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	LQTELDVSEQVQR	LQTELDVSEQVQR	2	LQTELDVSEQVQR2	4623.87	3843.95	3278.6
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	LQTENSELQQR	LQTENSELQQR	2	LQTENSELQQR2	415027	560929	466803
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	LQTENSELQQR	LQTENSELQQR	3	LQTENSELQQR3	24558.6	32917.1	20774.4
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	LQTEVQNTK	LQTEVQNTK	2	LQTEVQNTK2	83388.5	76112.6	101319
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	LQTGFTENEVLQIFCDTCEAVAR	LQTGFTENEVLQIFC(UniMod:4)DTC(UniMod:4)EAVAR	3	LQTGFTENEVLQIFC(UniMod:4)DTC(UniMod:4)EAVAR3	9106.99	20406.4	2580.94
D3ZWA1	D3ZWA1	D3ZWA1_RAT	Mindy2	Ubiquitin carboxyl-terminal hydrolase	1	LQTGLDVNVR	LQTGLDVNVR	2	LQTGLDVNVR2	37753	32951.3	24532.9
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	LQTGSYCLPVALEK	LQTGSYC(UniMod:4)LPVALEK	2	LQTGSYC(UniMod:4)LPVALEK2	75021.4	66538.3	61440.8
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	LQTGSYCLPVALEK	LQTGSYC(UniMod:4)LPVALEK	3	LQTGSYC(UniMod:4)LPVALEK3			4926.89
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LQTHADLSK	LQTHADLSK	2	LQTHADLSK2	76117.3	62047.3	41223.3
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	LQTHDIIEVPTR	LQTHDIIEVPTR	3	LQTHDIIEVPTR3	45354	35230.4	35869.1
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	LQTLATNLLASEASDK	LQTLATNLLASEASDK	2	LQTLATNLLASEASDK2	4956.84	8011.73	2615.56
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	LQTLATNLLASEASDKGNLPK	LQTLATNLLASEASDKGNLPK	3	LQTLATNLLASEASDKGNLPK3	12464.2	18804.1	12270.7
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	LQTLEGENTK	LQTLEGENTK	2	LQTLEGENTK2	254112	274773	289772
Q3B7U4	Q3B7U4	CTU2_RAT	Ctu2	Cytoplasmic tRNA 2-thiolation protein 2	1	LQTLFPSTVSTVYR	LQTLFPSTVSTVYR	2	LQTLFPSTVSTVYR2		7033.66	10162.3
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	LQTLGGYR	LQTLGGYR	2	LQTLGGYR2	84788.6	107054	113893
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	LQTLISGAVVEQLDFLR	LQTLISGAVVEQLDFLR	3	LQTLISGAVVEQLDFLR3	3687.12	2885.64	
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	LQTLKEELDFQK	LQTLKEELDFQK	3	LQTLKEELDFQK3	19343	20222.4	17844.1
Q66H91	Q66H91	GIT2_RAT	Git2	ARF GTPase-activating protein GIT2	1	LQTLQSENSSLR	LQTLQSENSSLR	2	LQTLQSENSSLR2	3519.94	3107.81	4388.92
Q66H91	Q66H91	GIT2_RAT	Git2	ARF GTPase-activating protein GIT2	1	LQTLQSENSSLRR	LQTLQSENSSLRR	3	LQTLQSENSSLRR3	9999.36	7822.41	7318.65
P53565	P53565;A0A8I5ZR58	CUX1_RAT	Cux1	Homeobox protein cut-like 1	0	LQTLQTALEK	LQTLQTALEK	2	LQTLQTALEK2	25945	32168.3	29879
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	LQTNHITMLLR	LQTNHITMLLR	3	LQTNHITMLLR3	22133.4	21878	27880.2
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	LQTQASATVPIPK	LQTQASATVPIPK	2	LQTQASATVPIPK2	13992.7	19222.3	14717.6
Q8R4A1	Q8R4A1;A0A8I6A3H1	ERO1A_RAT	Ero1a	ERO1-like protein alpha	0	LQTQGLGTALK	LQTQGLGTALK	2	LQTQGLGTALK2	70305.4	58736.6	42471.3
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	LQTQMDQDEGTK	LQTQMDQDEGTK	2	LQTQMDQDEGTK2	23548.6	21063.2	18559.4
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	LQTQMDQDEGTKYR	LQTQMDQDEGTKYR	3	LQTQMDQDEGTKYR3	3332.08		
P97521	P97521	MCAT_RAT	Slc25a20	Mitochondrial carnitine/acylcarnitine carrier protein	1	LQTQPPSLPGQPPMYSGTIDCFR	LQTQPPSLPGQPPMYSGTIDC(UniMod:4)FR	3	LQTQPPSLPGQPPMYSGTIDC(UniMod:4)FR3	92287.3	64288.6	97093.8
P97521	P97521	MCAT_RAT	Slc25a20	Mitochondrial carnitine/acylcarnitine carrier protein	1	LQTQPPSLPGQPPMYSGTIDCFRK	LQTQPPSLPGQPPMYSGTIDC(UniMod:4)FRK	3	LQTQPPSLPGQPPMYSGTIDC(UniMod:4)FRK3	36630.8	53669.4	68473.9
P29314	M0RB65;D3ZV50;P29314	RS9_RAT	Rps9	Small ribosomal subunit protein uS4	0	LQTQVFK	LQTQVFK	2	LQTQVFK2	28702.9	33064.3	20720
Q5M887	Q5M887	TPC13_RAT	Trappc13	Trafficking protein particle complex subunit 13	1	LQTSQLQR	LQTSQLQR	2	LQTSQLQR2	83108.9	67522.5	96912.5
D4A7V9	D4A7V9	E2AK4_RAT	Eif2ak4	eIF-2-alpha kinase GCN2	1	LQTTLANLHQK	LQTTLANLHQK	3	LQTTLANLHQK3	1744.31	2433.64	1629.19
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	LQTVAEK	LQTVAEK	2	LQTVAEK2	91774.3	101452	77581.1
D3ZJI7	D3ZJI7	D3ZJI7_RAT	Serpinb11	Serpin family B member 11	1	LQTVDFELSAEETRK	LQTVDFELSAEETRK	3	LQTVDFELSAEETRK3	8034.42	7464.54	7717.4
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	LQTVIQQCNDDEILR	LQTVIQQC(UniMod:4)NDDEILR	2	LQTVIQQC(UniMod:4)NDDEILR2	92645.7	102544	72542.7
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	LQTVIQQCNDDEILR	LQTVIQQC(UniMod:4)NDDEILR	3	LQTVIQQC(UniMod:4)NDDEILR3	30519.7	32150.5	29191.8
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	LQTVLEAVQDLLR	LQTVLEAVQDLLR	2	LQTVLEAVQDLLR2	11788.7		
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	LQTVLEAVQDLLRPHGWPLR	LQTVLEAVQDLLRPHGWPLR	3	LQTVLEAVQDLLRPHGWPLR3	45017.5	35341.6	36922.3
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	LQTVLEAVQDLLRPHGWPLR	LQTVLEAVQDLLRPHGWPLR	4	LQTVLEAVQDLLRPHGWPLR4	190961	127976	155185
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	LQTWAAR	LQTWAAR	2	LQTWAAR2	592222	466829	462893
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	LQTWATR	LQTWATR	2	LQTWATR2	29652.7	20515.6	20189.2
F1LZW6	F1LX07;F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	0	LQVAGEITTGPR	LQVAGEITTGPR	2	LQVAGEITTGPR2	210210	202320	205108
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	LQVALGDR	LQVALGDR	2	LQVALGDR2	45410.6	42582.4	41458
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	LQVALGDRDK	LQVALGDRDK	2	LQVALGDRDK2	26741.8	28042.4	18458.6
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LQVASDENYKDPTNLQGK	LQVASDENYKDPTNLQGK	3	LQVASDENYKDPTNLQGK3	975884	947638	1.0552e+06
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	LQVDMNELEEK	LQVDMNELEEK	2	LQVDMNELEEK2	8858.15	7505.03	6947.18
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	LQVEAQELK	LQVEAQELK	2	LQVEAQELK2	54001	55605.1	61254.9
A0A8I6AE55	A0A8I6AE55	A0A8I6AE55_RAT	ENSRNOG00000063193	Ig-like domain-containing protein	1	LQVEDTGIYYCLQR	LQVEDTGIYYC(UniMod:4)LQR	2	LQVEDTGIYYC(UniMod:4)LQR2	14872.1	12658.8	11728.5
A0A8I6AE55	A0A8I6AE55	A0A8I6AE55_RAT	ENSRNOG00000063193	Ig-like domain-containing protein	1	LQVEDTGIYYCLQR	LQVEDTGIYYC(UniMod:4)LQR	3	LQVEDTGIYYC(UniMod:4)LQR3	9349.68	10978.3	9702.16
Q5I0C3	Q5I0C3	MCCA_RAT	Mccc1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	1	LQVEHPVTEMITGTDLVEWQLR	LQVEHPVTEMITGTDLVEWQLR	3	LQVEHPVTEMITGTDLVEWQLR3	5454.16	10658	6966.46
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LQVELDSVTGLLNQSDSK	LQVELDSVTGLLNQSDSK	2	LQVELDSVTGLLNQSDSK2	233633		
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LQVELDSVTGLLNQSDSK	LQVELDSVTGLLNQSDSK	3	LQVELDSVTGLLNQSDSK3	2.18907e+06	2.62813e+06	2.57555e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	LQVEPAVDTSGVQCYGPGIEGQGVFR	LQVEPAVDTSGVQC(UniMod:4)YGPGIEGQGVFR	3	LQVEPAVDTSGVQC(UniMod:4)YGPGIEGQGVFR3	2.21101e+06	2.35368e+06	2.55363e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	LQVEPAVDTSGVQCYGPGIEGQGVFR	LQVEPAVDTSGVQC(UniMod:4)YGPGIEGQGVFR	4	LQVEPAVDTSGVQC(UniMod:4)YGPGIEGQGVFR4	14153.2	20718.5	22041
Q63321	Q63321	PLOD1_RAT	Plod1	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1	1	LQVEQFLAEHGGEYQSVK	LQVEQFLAEHGGEYQSVK	3	LQVEQFLAEHGGEYQSVK3	13188.8		5800.16
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	LQVEQTAHR	LQVEQTAHR	2	LQVEQTAHR2	161743	127101	110878
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	LQVFGLYSGEEFHETFDCPIK	LQVFGLYSGEEFHETFDC(UniMod:4)PIK	3	LQVFGLYSGEEFHETFDC(UniMod:4)PIK3		8634.73	6381.11
P61212	P61212	ARL1_RAT	Arl1	ADP-ribosylation factor-like protein 1	1	LQVGEVVTTIPTIGFNVETVTYK	LQVGEVVTTIPTIGFNVETVTYK	3	LQVGEVVTTIPTIGFNVETVTYK3	15662.4	11472.6	5647.65
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	LQVGQELIDYFSDK	LQVGQELIDYFSDK	2	LQVGQELIDYFSDK2		6916.84	
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	LQVHHSETSPHDPPLFEEQK	LQVHHSETSPHDPPLFEEQK	3	LQVHHSETSPHDPPLFEEQK3	71275.8	39247.7	26068.1
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	LQVHHSETSPHDPPLFEEQK	LQVHHSETSPHDPPLFEEQK	4	LQVHHSETSPHDPPLFEEQK4	584484	420746	365077
P35284	P35284	RAB12_RAT	Rab12	Ras-related protein Rab-12	1	LQVIIIGSR	LQVIIIGSR	2	LQVIIIGSR2	51418.9	48673.7	55795.6
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	LQVLAEFQEK	LQVLAEFQEK	2	LQVLAEFQEK2	804217	683559	623074
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	LQVLGTNSFVK	LQVLGTNSFVK	2	LQVLGTNSFVK2	59623.5	90504.1	89054.8
Q5XI23	Q5XI23	Q5XI23_RAT	Mkrn2	RING-type E3 ubiquitin transferase	1	LQVLHPFDPEQR	LQVLHPFDPEQR	3	LQVLHPFDPEQR3	11832.6	5604.26	4640.27
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	LQVMANSR	LQVMANSR	2	LQVMANSR2	58258.4	58666.4	72019.6
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	LQVNQDGR	LQVNQDGR	2	LQVNQDGR2	146604	113756	85867.1
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	LQVNQVVIHEDFIQSCFDR	LQVNQVVIHEDFIQSC(UniMod:4)FDR	3	LQVNQVVIHEDFIQSC(UniMod:4)FDR3	7019.69		11702.9
Q05030	Q05030	PGFRB_RAT	Pdgfrb	Platelet-derived growth factor receptor beta	1	LQVNVPVR	LQVNVPVR	2	LQVNVPVR2	74194.8	73160.2	71288.8
Q63321	Q63321	PLOD1_RAT	Plod1	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1	1	LQVNYLGNYIPR	LQVNYLGNYIPR	2	LQVNYLGNYIPR2	2053.62	4078.52	4878.69
D3ZW49	D3ZW49;B5DFJ7	D3ZW49_RAT	Tmem9b	TMEM9 domain family, member B	0	LQVQEQR	LQVQEQR	2	LQVQEQR2	82488.9	149561	170083
B0K034	B0K034	B0K034_RAT	Dtd2	D-aminoacyl-tRNA deacylase	1	LQVRPADGDAEAQWVEIR	LQVRPADGDAEAQWVEIR	3	LQVRPADGDAEAQWVEIR3	7301.09	3219.03	
Q5RJS6	Q5RJS6	MSPD1_RAT	Mospd1	Motile sperm domain-containing protein 1	1	LQVSEQSQR	LQVSEQSQR	2	LQVSEQSQR2	51806.5	50323.2	68265.3
P97535	P97535	PLA1A_RAT	Pla1a	Phospholipase A1 member A	1	LQVSMAVLR	LQVSMAVLR	2	LQVSMAVLR2	229576	235832	222616
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	LQVSSVLSQPLAQAAVK	LQVSSVLSQPLAQAAVK	2	LQVSSVLSQPLAQAAVK2	206588	181963	191170
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	LQVSSVLSQPLAQAAVK	LQVSSVLSQPLAQAAVK	3	LQVSSVLSQPLAQAAVK3	80753.6	75149.7	79999.6
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	LQVVDRPLPVR	LQVVDRPLPVR	3	LQVVDRPLPVR3	153494	126216	136534
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	LQVVFTSDFSNEER	LQVVFTSDFSNEER	2	LQVVFTSDFSNEER2	196254	189691	193308
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	LQVVLEHMPVGPDAILR	LQVVLEHMPVGPDAILR	2	LQVVLEHMPVGPDAILR2	18230.9	14934.9	11864.9
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	LQVVLEHMPVGPDAILR	LQVVLEHMPVGPDAILR	3	LQVVLEHMPVGPDAILR3	77802.2	93388.7	64316
D3ZZJ7	D3ZZJ7	D3ZZJ7_RAT	Dcp1b	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	LQVVQQEQQAAPR	LQVVQQEQQAAPR	2	LQVVQQEQQAAPR2	4348.81	2010.58	5943.66
P35286	P35286	RAB13_RAT	Rab13	Ras-related protein Rab-13	1	LQVWDTAGQER	LQVWDTAGQER	2	LQVWDTAGQER2	60556.8	75856	72635.3
A0A8J8YPH6	A0A8J8YPH6	A0A8J8YPH6_RAT	Hps4	HPS4, biogenesis of lysosomal organelles complex 3 subunit 2	1	LQWDTFITQVLR	LQWDTFITQVLR	2	LQWDTFITQVLR2	5244.46	8614.45	8129.87
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	LQWFCDR	LQWFC(UniMod:4)DR	2	LQWFC(UniMod:4)DR2	25006.6	20208.3	14164.1
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	LQWLLDQSFK	LQWLLDQSFK	2	LQWLLDQSFK2	20299.2	21744.5	30730.7
F7FNG5	F7FNG5	F7FNG5_RAT	Cul4a	Cullin 4A	1	LQWQTTLGHAVLK	LQWQTTLGHAVLK	3	LQWQTTLGHAVLK3	1243.74		6034.23
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	LQWVPGSDGASPIR	LQWVPGSDGASPIR	2	LQWVPGSDGASPIR2	24976.6	33134.9	26609.3
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	LQYDPTCER	LQYDPTC(UniMod:4)ER	2	LQYDPTC(UniMod:4)ER2	275165	253776	264623
Q6AYB4	Q6AYB4	HSP7E_RAT	Hspa14	Heat shock 70 kDa protein 14	1	LQYEIDTGEETK	LQYEIDTGEETK	2	LQYEIDTGEETK2	2209.45		
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	LQYFEDHENEIVK	LQYFEDHENEIVK	3	LQYFEDHENEIVK3	75094	83659.4	77633.2
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	LQYFGQSLSGGQDLTGDGLVDLAVGSK	LQYFGQSLSGGQDLTGDGLVDLAVGSK	3	LQYFGQSLSGGQDLTGDGLVDLAVGSK3	22755.2	28326.3	29036.7
A0A0G2K1A4	A0A0G2K1A4	A0A0G2K1A4_RAT	Evi5l	Ecotropic viral integration site 5-like	1	LQYLAAQNK	LQYLAAQNK	2	LQYLAAQNK2	13821.3	21284.8	18170.9
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	LQYLSSK	LQYLSSK	2	LQYLSSK2	82842.1	121731	119045
Q99N37	Q99N37	RHG17_RAT	Arhgap17	Rho GTPase-activating protein 17	1	LQYLWTTCQK	LQYLWTTC(UniMod:4)QK	2	LQYLWTTC(UniMod:4)QK2	13417.8	14719.6	8716.14
Q8R553	Q8R553	CSTN3_RAT	Clstn3	Calsyntenin-3	1	LQYSGEK	LQYSGEK	2	LQYSGEK2	29858.1	24655.7	
A0A0G2JTJ9	A0A0G2JTJ9	A0A0G2JTJ9_RAT	Tfcp2	Transcription factor CP2	1	LQYTEHQQLEGWR	LQYTEHQQLEGWR	3	LQYTEHQQLEGWR3	6173.79		5515.86
Q68FS3	Q68FS3	FBX7_RAT	Fbxo7	F-box only protein 7	1	LQYTHPLCEGGSAVLTCVPLGK	LQYTHPLC(UniMod:4)EGGSAVLTC(UniMod:4)VPLGK	3	LQYTHPLC(UniMod:4)EGGSAVLTC(UniMod:4)VPLGK3	22359.8	23486.1	26290.7
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	LQYYVPENFWK	LQYYVPENFWK	2	LQYYVPENFWK2	14186.1	13356.8	14757.9
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	LQYYVPR	LQYYVPR	2	LQYYVPR2	167519	210329	266913
Q63692	Q63692	CDC37_RAT	Cdc37	Hsp90 co-chaperone Cdc37	1	LRAEAQQLR	LRAEAQQLR	2	LRAEAQQLR2	2276.07	2686.28	2359.02
Q62796	Q62796	RBP1_RAT	Ralbp1	RalA-binding protein 1	1	LRAEIAEIQSR	LRAEIAEIQSR	3	LRAEIAEIQSR3	5289.6	5925.02	6001.85
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	LRAELAGALAEMETMK	LRAELAGALAEMETMK	3	LRAELAGALAEMETMK3	13182.5	15291.6	
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	LRAEPDHMVLGK	LRAEPDHMVLGK	3	LRAEPDHMVLGK3	7163.03	18037.9	10641.5
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	LRAESEVPIVK	LRAESEVPIVK	3	LRAESEVPIVK3	38128.7	30572.6	51358.5
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	LRAPGALLAAAGLSESATEIVER	LRAPGALLAAAGLSESATEIVER	3	LRAPGALLAAAGLSESATEIVER3	2535.25		1469.48
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	LRAPIICVLGHVDTGK	LRAPIIC(UniMod:4)VLGHVDTGK	3	LRAPIIC(UniMod:4)VLGHVDTGK3	10343.3	12515.8	12202
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	LRAPIICVLGHVDTGK	LRAPIIC(UniMod:4)VLGHVDTGK	4	LRAPIIC(UniMod:4)VLGHVDTGK4	25303.5	30625.3	34280.5
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	LRAPLPWQHR	LRAPLPWQHR	3	LRAPLPWQHR3	5759.56	1915.93	6675.6
G3V8V4	G3V8V4	G3V8V4_RAT	Cers2	Ceramide synthase 2	1	LRAPPNATLEHFYLTVGK	LRAPPNATLEHFYLTVGK	3	LRAPPNATLEHFYLTVGK3		29381.8	31608
G3V8V4	G3V8V4	G3V8V4_RAT	Cers2	Ceramide synthase 2	1	LRAPPNATLEHFYLTVGK	LRAPPNATLEHFYLTVGK	4	LRAPPNATLEHFYLTVGK4	17154.7	14795.7	31664.2
Q56AP7	Q56AP7	CRBN_RAT	Crbn	Protein cereblon	1	LRCELDIMNK	LRC(UniMod:4)ELDIMNK	3	LRC(UniMod:4)ELDIMNK3	3379.91	5327.55	7559.81
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	LRDAASDTR	LRDAASDTR	2	LRDAASDTR2			50182.5
D3ZE05	D3ZE05	D3ZE05_RAT	Cilp2	Cartilage intermediate layer protein 2	1	LRDCEDAPVTDSHFR	LRDC(UniMod:4)EDAPVTDSHFR	3	LRDC(UniMod:4)EDAPVTDSHFR3	26033.4	21667.7	32617
D3ZE05	D3ZE05	D3ZE05_RAT	Cilp2	Cartilage intermediate layer protein 2	1	LRDCEDAPVTDSHFR	LRDC(UniMod:4)EDAPVTDSHFR	4	LRDC(UniMod:4)EDAPVTDSHFR4	54209.6	66946	54816.3
Q04589	Q04589	FGFR1_RAT	Fgfr1	Fibroblast growth factor receptor 1	1	LRDDVQSINWLR	LRDDVQSINWLR	3	LRDDVQSINWLR3	163652	182668	142176
D3ZZC5	D3ZZC5	D3ZZC5_RAT	Tradd	Tumor necrosis factor receptor type 1-associated DEATH domain protein	1	LRDEELAELEDEFCK	LRDEELAELEDEFC(UniMod:4)K	3	LRDEELAELEDEFC(UniMod:4)K3	6456.02	7174.4	3496.83
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	LRDEINLAK	LRDEINLAK	2	LRDEINLAK2	11577.7	13462.2	5242.86
Q66H50	Q66H50	FACR1_RAT	Far1	Fatty acyl-CoA reductase 1	1	LRDENPDFR	LRDENPDFR	3	LRDENPDFR3	9015.6	8989.35	14321.8
Q68FW4	Q68FW4	STX18_RAT	Stx18	Syntaxin-18	1	LRDFLLEHR	LRDFLLEHR	3	LRDFLLEHR3	8266.7	5487.26	5279.6
B0BNI5	B0BNI5	OLFL3_RAT	Olfml3	Olfactomedin-like protein 3	1	LRDFTLTMAAR	LRDFTLTMAAR	3	LRDFTLTMAAR3	15409.6	15495.5	18795.6
B5DFG7	B5DFG7	B5DFG7_RAT	Cytl1	Cytl1 protein	1	LRDFVASPQCWK	LRDFVASPQC(UniMod:4)WK	3	LRDFVASPQC(UniMod:4)WK3	8788.17	2785.92	3976.7
P51111	P51111	HD_RAT	Htt	Huntingtin	1	LRDGDSNPTLGER	LRDGDSNPTLGER	3	LRDGDSNPTLGER3	43937.9	51499.3	50037.5
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	LRDGTGNQMLQVMENGR	LRDGTGNQMLQVMENGR	3	LRDGTGNQMLQVMENGR3	2593.96	2809.46	7082.71
Q6TA25	Q6TA25	FGOP2_RAT	Fgfr1op2	FGFR1 oncogene partner 2 homolog	1	LRDHDDAAESLIEQTTALSK	LRDHDDAAESLIEQTTALSK	3	LRDHDDAAESLIEQTTALSK3	26985.3	21768.9	30467.2
Q6TA25	Q6TA25	FGOP2_RAT	Fgfr1op2	FGFR1 oncogene partner 2 homolog	1	LRDHDDAAESLIEQTTALSK	LRDHDDAAESLIEQTTALSK	4	LRDHDDAAESLIEQTTALSK4	53497.3	39408.9	64149.5
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	LRDHLLESEDSHTR	LRDHLLESEDSHTR	3	LRDHLLESEDSHTR3	2805.86	1662.51	
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	LRDHLLESEDSHTR	LRDHLLESEDSHTR	4	LRDHLLESEDSHTR4	20610.8	7656.27	9192.42
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	LRDLEDADLLIQLEAFEEAK	LRDLEDADLLIQLEAFEEAK	3	LRDLEDADLLIQLEAFEEAK3	108075	160999	99221.2
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	LRDLEDSLAR	LRDLEDSLAR	3	LRDLEDSLAR3	41377.2	40358.6	30833.5
P53610	P53610	PGTB1_RAT	Pggt1b	Geranylgeranyl transferase type-1 subunit beta	1	LRDLHQSWK	LRDLHQSWK	3	LRDLHQSWK3	4317.23	9141.67	8068.08
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LRDLQGAVDDLDADMK	LRDLQGAVDDLDADMK	2	LRDLQGAVDDLDADMK2		4927.86	2405.05
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LRDLQGAVDDLDADMK	LRDLQGAVDDLDADMK	3	LRDLQGAVDDLDADMK3	42066.7	55030.6	52598.6
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LRDLQGAVDDLDADMKEVEAVR	LRDLQGAVDDLDADMKEVEAVR	4	LRDLQGAVDDLDADMKEVEAVR4	19874.2	15969.5	9016.93
Q68G38	Q68G38	TOR1A_RAT	Tor1a	Torsin-1A	1	LRDMEHALAVSVFNNK	LRDMEHALAVSVFNNK	3	LRDMEHALAVSVFNNK3	5495.4	5478.79	9141.28
G3V8D4	G3V8D4	APOC2_RAT	Apoc2	Apolipoprotein C-II	1	LRDMYSK	LRDMYSK	1	LRDMYSK1	4979.56	4682.69	4304.1
G3V8D4	G3V8D4	APOC2_RAT	Apoc2	Apolipoprotein C-II	1	LRDMYSK	LRDMYSK	2	LRDMYSK2	3.9631e+06	5.3673e+06	4.36246e+06
P02770	P02770	ALBU_RAT	Alb	Albumin	1	LRDNYGELADCCAK	LRDNYGELADC(UniMod:4)C(UniMod:4)AK	2	LRDNYGELADC(UniMod:4)C(UniMod:4)AK2	147641	138839	83422.5
P02770	P02770	ALBU_RAT	Alb	Albumin	1	LRDNYGELADCCAK	LRDNYGELADC(UniMod:4)C(UniMod:4)AK	3	LRDNYGELADC(UniMod:4)C(UniMod:4)AK3	2.68904e+06	2.72707e+06	1.90379e+06
P32362	P32362	DCUP_RAT	Urod	Uroporphyrinogen decarboxylase (Fragment)	1	LRDPAAVASELGYVFQAITLTR	LRDPAAVASELGYVFQAITLTR	3	LRDPAAVASELGYVFQAITLTR3	3812.97	603.615	
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	LRDQGPDVLLAK	LRDQGPDVLLAK	2	LRDQGPDVLLAK2	119387	72798.5	77711.2
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	LRDQGPDVLLAK	LRDQGPDVLLAK	3	LRDQGPDVLLAK3	884692	893793	1.09622e+06
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LRDQLGTAK	LRDQLGTAK	2	LRDQLGTAK2	7772.63	3658.56	6293.36
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	LRDQPSLVQAIFNGDPDEVR	LRDQPSLVQAIFNGDPDEVR	3	LRDQPSLVQAIFNGDPDEVR3		2177.01	1759.21
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	LRDQTLSPTIISGLHSIAR	LRDQTLSPTIISGLHSIAR	4	LRDQTLSPTIISGLHSIAR4	3620.24	3166.8	
Q63787	Q63787	P85A_RAT	Pik3r1	Phosphatidylinositol 3-kinase regulatory subunit alpha	1	LRDTADGTFLVR	LRDTADGTFLVR	3	LRDTADGTFLVR3	7610.97		8957.41
A0A8I5ZP83	D4A9Z8;A0A8I5ZP83	A0A8I5ZP83_RAT	Chmp4b	Charged multivesicular body protein 4B	0	LRDTEEMLSK	LRDTEEMLSK	2	LRDTEEMLSK2	7502.19	8265.55	7738.06
A0A8I5ZP83	D4A9Z8;A0A8I5ZP83	A0A8I5ZP83_RAT	Chmp4b	Charged multivesicular body protein 4B	0	LRDTEEMLSK	LRDTEEMLSK	3	LRDTEEMLSK3	193542	231145	201271
A0A8I5ZP83	D4A9Z8;A0A8I5ZP83	A0A8I5ZP83_RAT	Chmp4b	Charged multivesicular body protein 4B	0	LRDTEEMLSKK	LRDTEEMLSKK	3	LRDTEEMLSKK3	5476.71	11248.2	6531.65
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	LRDYAQLGPR	LRDYAQLGPR	3	LRDYAQLGPR3	8172.02	10010.4	6578.58
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	LRDYFSNPGNFER	LRDYFSNPGNFER	3	LRDYFSNPGNFER3	23864.9	26360	25628.7
Q8VHF5	Q8VHF5	CISY_RAT	Cs	Citrate synthase, mitochondrial	1	LRDYIWNTLNSGR	LRDYIWNTLNSGR	3	LRDYIWNTLNSGR3	115675	116845	140586
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	LREAAEGLR	LREAAEGLR	2	LREAAEGLR2	12972	11254	10591.4
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	LREAEETQNSLQAECDQYR	LREAEETQNSLQAEC(UniMod:4)DQYR	3	LREAEETQNSLQAEC(UniMod:4)DQYR3	9813.42	21122.3	33930.4
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	LREALDEETAAK	LREALDEETAAK	3	LREALDEETAAK3	40310.2	37132.6	23107.2
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	LREALTETTLR	LREALTETTLR	3	LREALTETTLR3	16450.4	13731.5	17180.7
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LREANQQQQFNR	LREANQQQQFNR	3	LREANQQQQFNR3	38029	61398.3	59546.8
P62703	P62703	RS4X_RAT	Rps4x	Small ribosomal subunit protein eS4	1	LRECLPLIIFLR	LREC(UniMod:4)LPLIIFLR	3	LREC(UniMod:4)LPLIIFLR3	10422.8	10961.7	8254.76
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	LREDAAQLQR	LREDAAQLQR	3	LREDAAQLQR3	24217.6	28115.4	22918.3
Q07266	Q07266	DREB_RAT	Dbn1	Drebrin	1	LREDENAEPVGTTYQK	LREDENAEPVGTTYQK	3	LREDENAEPVGTTYQK3	7309.17	10875.9	13230.5
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	LREDISIMIK	LREDISIMIK	3	LREDISIMIK3	2260.18	3546.51	3223.92
B2GUV7	B2GUV7;D4A4L4	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	0	LREEEER	LREEEER	2	LREEEER2			8843.5
Q6TUD4	Q6TUD4	YIPF3_RAT	Yipf3	Protein YIPF3	1	LREEEVDADAAAAEEEDGEFLGMK	LREEEVDADAAAAEEEDGEFLGMK	3	LREEEVDADAAAAEEEDGEFLGMK3	9092.73	7858.93	11707.6
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	LREEHILMR	LREEHILMR	3	LREEHILMR3	183205	183043	168698
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	LREEIEELR	LREEIEELR	2	LREEIEELR2	30466.3	22255.1	27272
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	LREEIEELR	LREEIEELR	3	LREEIEELR3	567867	623631	606049
B2GV15	B2GV15	B2GV15_RAT	Dbt	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	LREELKPVALAR	LREELKPVALAR	3	LREELKPVALAR3	18560	12556.7	23952.2
P63035	P63035	CYH2_RAT	Cyth2	Cytohesin-2	1	LREELSEAMSEVEGLEANEGSK	LREELSEAMSEVEGLEANEGSK	3	LREELSEAMSEVEGLEANEGSK3	5804.33	3555.63	2747.86
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	LREEMEEITQQQLVHDK	LREEMEEITQQQLVHDK	3	LREEMEEITQQQLVHDK3	7509.73	12062.7	8674.75
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	LREEMEEITQQQLVHDK	LREEMEEITQQQLVHDK	4	LREEMEEITQQQLVHDK4	6683.91	13285.1	12644.7
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	LREENEVLR	LREENEVLR	3	LREENEVLR3	16165.2	30929.1	15389.1
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	LREEVPLGQSIAR	LREEVPLGQSIAR	3	LREEVPLGQSIAR3	14741.8	17517.1	18265
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	LREEVVTK	LREEVVTK	2	LREEVVTK2	11956.3	7799.25	14609.5
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	LREGQEVEFLVTSLPR	LREGQEVEFLVTSLPR	3	LREGQEVEFLVTSLPR3	7792.46	10758.3	12705.2
Q5FWT9	Q5FWT9	SIKE1_RAT	Sike1	Suppressor of IKBKE 1	1	LREHDAAAESLVDQSAALHR	LREHDAAAESLVDQSAALHR	4	LREHDAAAESLVDQSAALHR4	19847.2	19316.7	19151
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	LREHENSTLDR	LREHENSTLDR	3	LREHENSTLDR3	32181.9		33590.8
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	LREHGAEASTEPK	LREHGAEASTEPK	2	LREHGAEASTEPK2			2692.36
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	LREHGAEASTEPK	LREHGAEASTEPK	3	LREHGAEASTEPK3			20888.7
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	LREHLAK	LREHLAK	2	LREHLAK2			80706.6
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	LREHQEALHQQR	LREHQEALHQQR	3	LREHQEALHQQR3			6934.73
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	LREHSESFSK	LREHSESFSK	3	LREHSESFSK3			11189.2
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	LREIELLCQEHGQENDDLVQR	LREIELLC(UniMod:4)QEHGQENDDLVQR	3	LREIELLC(UniMod:4)QEHGQENDDLVQR3	15534.8	13911.5	9689.99
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	LREIELLCQEHGQENDDLVQR	LREIELLC(UniMod:4)QEHGQENDDLVQR	4	LREIELLC(UniMod:4)QEHGQENDDLVQR4	279263	340761	342061
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	LREIVLPMEQEIAELK	LREIVLPMEQEIAELK	3	LREIVLPMEQEIAELK3	14100.4	15408.6	20602.4
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	LRELDLAQEK	LRELDLAQEK	3	LRELDLAQEK3	8422.74		13855.6
Q6AYI5	Q6AYI5	SHOC2_RAT	Shoc2	Leucine-rich repeat protein SHOC-2	1	LRELDLEENK	LRELDLEENK	3	LRELDLEENK3	3863.35	5491.48	8624.95
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	LRELDRNELFEK	LRELDRNELFEK	3	LRELDRNELFEK3	20556.7	16642.6	23870.2
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	LRELDRNELFEK	LRELDRNELFEK	4	LRELDRNELFEK4	58322.4	53976	65541.5
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	LRELFEADPER	LRELFEADPER	3	LRELFEADPER3	76501.6	87145.6	76506.6
D3ZAF6	D3ZAF6	ATPK_RAT	Atp5mf	ATP synthase subunit f, mitochondrial	1	LRELPSWILMR	LRELPSWILMR	3	LRELPSWILMR3	54661.8	79037.4	99697.6
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	LRELYPSLEGQLK	LRELYPSLEGQLK	2	LRELYPSLEGQLK2	4882.17	4667.22	2496.34
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	LRELYPSLEGQLK	LRELYPSLEGQLK	3	LRELYPSLEGQLK3	131063	139136	122426
Q5HZY2	Q5HZY2	SAR1B_RAT	Sar1b	GTP-binding protein SAR1b	1	LREMFGLYGQTTGK	LREMFGLYGQTTGK	3	LREMFGLYGQTTGK3		8091.72	7501.59
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	LREMLNISGPPLK	LREMLNISGPPLK	3	LREMLNISGPPLK3	14181.8	11932.4	18098.2
Q5RK08	Q5RK08	Q5RK08_RAT	Nipsnap2	Glioblastoma amplified sequence	1	LRENQEFVSFR	LRENQEFVSFR	3	LRENQEFVSFR3	82179.5	70177.2	113402
P53565	P53565;A0A8I5ZR58	CUX1_RAT	Cux1	Homeobox protein cut-like 1	0	LRENSASQISQLEQQLNAK	LRENSASQISQLEQQLNAK	3	LRENSASQISQLEQQLNAK3	7336.08	7458.93	4101.3
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	LRENVFQEHQTLK	LRENVFQEHQTLK	2	LRENVFQEHQTLK2	4991.59		
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	LRENVFQEHQTLK	LRENVFQEHQTLK	3	LRENVFQEHQTLK3	121105	108440	110784
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	LRENVFQEHQTLK	LRENVFQEHQTLK	4	LRENVFQEHQTLK4	685498	816628	850046
D3ZW92	D3ZW92	D3ZW92_RAT	Fam78a	Family with sequence similarity 78, member A	1	LREPIAQDQPK	LREPIAQDQPK	3	LREPIAQDQPK3	11903.8	17298.9	16668.5
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	LREPLSSQDVQMVTENWLVLEPR	LREPLSSQDVQMVTENWLVLEPR	3	LREPLSSQDVQMVTENWLVLEPR3	38545.7	29360.6	29701.3
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	LREQEEDQMLESMIQNLGLQR	LREQEEDQMLESMIQNLGLQR	3	LREQEEDQMLESMIQNLGLQR3	2331.22	4527.14	1278.44
A0A8I6AEI1	A0A8I6AEI1	A0A8I6AEI1_RAT	Hps1	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1	1	LREQEQSFAVEAVER	LREQEQSFAVEAVER	3	LREQEQSFAVEAVER3	20869.6	20021	16986.5
B5DEZ3	B5DEZ3	B5DEZ3_RAT	Ccdc126	Coiled-coil domain containing 126	1	LREQILDLSK	LREQILDLSK	3	LREQILDLSK3	46091.4	51243.1	56048.2
Q3MID3	Q3MID3	ARFG2_RAT	Arfgap2	ADP-ribosylation factor GTPase-activating protein 2	1	LREQQAADAK	LREQQAADAK	2	LREQQAADAK2			5866.3
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	LREQQLVGEK	LREQQLVGEK	3	LREQQLVGEK3	116535	111622	128467
B2GV52	B2GV52	BL1S5_RAT	Bloc1s5	Biogenesis of lysosome-related organelles complex 1 subunit 5	1	LREQYAAMEK	LREQYAAMEK	3	LREQYAAMEK3	11355.4	18840	20030.2
Q9JI51	Q9JI51	VTI1A_RAT	Vti1a	Vesicle transport through interaction with t-SNAREs homolog 1A	1	LRETDANLGK	LRETDANLGK	2	LRETDANLGK2	1200.25	4050.46	1916.74
A0A0G2K1A4	A0A0G2K1A4	A0A0G2K1A4_RAT	Evi5l	Ecotropic viral integration site 5-like	1	LRETETLGALR	LRETETLGALR	3	LRETETLGALR3	7795.89	8632.39	14682.2
P53565	P53565;A0A8I5ZR58	CUX1_RAT	Cux1	Homeobox protein cut-like 1	0	LRETLEEYNK	LRETLEEYNK	3	LRETLEEYNK3	13878.3	11004.8	11525.2
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LREVSTK	LREVSTK	2	LREVSTK2			4646.91
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	LREVVETPLLHPER	LREVVETPLLHPER	3	LREVVETPLLHPER3	31759.7	19235.3	36402.1
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	LREVVETPLLHPER	LREVVETPLLHPER	4	LREVVETPLLHPER4	135708	120080	96117.5
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	LREVVLDAHTTQFK	LREVVLDAHTTQFK	3	LREVVLDAHTTQFK3	5184.23	6978.6	4939.16
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	LREVVLDAHTTQFK	LREVVLDAHTTQFK	4	LREVVLDAHTTQFK4	23679.1	28493.7	34063.9
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	LREYDEPYVLLQNPESLFYK	LREYDEPYVLLQNPESLFYK	3	LREYDEPYVLLQNPESLFYK3	31039.6	25043.7	28731.6
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	LRFESENTDSEIHCDR	LRFESENTDSEIHC(UniMod:4)DR	3	LRFESENTDSEIHC(UniMod:4)DR3	39768.9	21537.7	31793.2
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	LRFESENTDSEIHCDR	LRFESENTDSEIHC(UniMod:4)DR	4	LRFESENTDSEIHC(UniMod:4)DR4	110623	117127	121123
P07335	P07335	KCRB_RAT	Ckb	Creatine kinase B-type	1	LRFPAEDEFPDLSSHNNHMAK	LRFPAEDEFPDLSSHNNHMAK	3	LRFPAEDEFPDLSSHNNHMAK3	6540.65		6491.19
P07335	P07335	KCRB_RAT	Ckb	Creatine kinase B-type	1	LRFPAEDEFPDLSSHNNHMAK	LRFPAEDEFPDLSSHNNHMAK	4	LRFPAEDEFPDLSSHNNHMAK4	71937.5	79572.9	96471.3
P08689	P08689	SHBG_RAT	Shbg	Sex hormone-binding globulin	1	LRFPLVPALDGCIR	LRFPLVPALDGC(UniMod:4)IR	3	LRFPLVPALDGC(UniMod:4)IR3	6424.69	8759.82	7343.31
A0A0G2K069	A0A0G2K069	A0A0G2K069_RAT	Col11a2	Collagen type XI alpha 2 chain	1	LRGANEDELSPETSPYVK	LRGANEDELSPETSPYVK	3	LRGANEDELSPETSPYVK3	23173.6	20648.8	25370.5
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	LRGDAQQVVATR	LRGDAQQVVATR	3	LRGDAQQVVATR3	48604.6	50806.5	50334.1
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	LRGDPSIA	LRGDPSIA	2	LRGDPSIA2	355824	319721	355082
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	LRGEAPQNAPR	LRGEAPQNAPR	3	LRGEAPQNAPR3	57330.7		63086.6
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	LRGEDDESECVINYVEK	LRGEDDESEC(UniMod:4)VINYVEK	3	LRGEDDESEC(UniMod:4)VINYVEK3	4081.49		5495.93
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	LRGELESSDQVR	LRGELESSDQVR	3	LRGELESSDQVR3	59105.5	73728.6	59977.2
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	LRGGANEGSEDDMLVDWFK	LRGGANEGSEDDMLVDWFK	3	LRGGANEGSEDDMLVDWFK3	7311.12	12122.2	9579.38
P0C5W1	P0C5W1	MAP1S_RAT	Map1s	Microtubule-associated protein 1S	1	LRGGEDEAVCAR	LRGGEDEAVC(UniMod:4)AR	3	LRGGEDEAVC(UniMod:4)AR3	41133.6	52123.6	30629.9
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	LRGIEQAVQSHAVAEEEAR	LRGIEQAVQSHAVAEEEAR	4	LRGIEQAVQSHAVAEEEAR4		3729.03	4336.56
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	LRGPSRPSPGLQLYVDCK	LRGPSRPSPGLQLYVDC(UniMod:4)K	4	LRGPSRPSPGLQLYVDC(UniMod:4)K4	40198.2	43682.1	48722.2
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	LRGSSTITCNR	LRGSSTITC(UniMod:4)NR	3	LRGSSTITC(UniMod:4)NR3		16228.3	
Q3MHU5	Q3MHU5	RETR2_RAT	Retreg2	Reticulophagy regulator 2	1	LRGWEAVLAAAQR	LRGWEAVLAAAQR	3	LRGWEAVLAAAQR3	6423.68	9576.1	6213.93
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	LRHEILLSQSVR	LRHEILLSQSVR	3	LRHEILLSQSVR3	11887.2	8837.61	8706.83
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LRIEEEVEACK	LRIEEEVEAC(UniMod:4)K	3	LRIEEEVEAC(UniMod:4)K3	9004.78		5703.56
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LRLEECEQR	LRLEEC(UniMod:4)EQR	3	LRLEEC(UniMod:4)EQR3	36998.8	49938.7	37492.9
F1M9P0	F1M9P0	F1M9P0_RAT	Ap1ar	Adaptor-related protein complex 1 associated regulatory protein	1	LRLEEEALYAAQR	LRLEEEALYAAQR	3	LRLEEEALYAAQR3	7716.03	3909.21	9225.93
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	LRLEMEMER	LRLEMEMER	3	LRLEMEMER3	17087.5	8998.9	
B2GV14	B2GV14	B2GV14_RAT	Txlna	Taxilin alpha	1	LRLENVELAER	LRLENVELAER	3	LRLENVELAER3	7626	12698.7	8349.74
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LRLEPLK	LRLEPLK	2	LRLEPLK2	306093	240634	296220
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LRLEPSK	LRLEPSK	2	LRLEPSK2	5.2681e+06	5.15165e+06	4.80685e+06
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LRLEPSKEYLIMGMDGVTSDLK	LRLEPSKEYLIMGMDGVTSDLK	3	LRLEPSKEYLIMGMDGVTSDLK3	7287.58	10869.9	9516.01
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LRLEPSKEYLIMGMDGVTSDLK	LRLEPSKEYLIMGMDGVTSDLK	4	LRLEPSKEYLIMGMDGVTSDLK4	89853.6	146115	66332.5
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	LRLEQQK	LRLEQQK	2	LRLEQQK2	3383.03	2967.06	2793.84
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LRLEVNLQAMK	LRLEVNLQAMK	2	LRLEVNLQAMK2	143505	122979	135034
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LRLEVNLQAMK	LRLEVNLQAMK	3	LRLEVNLQAMK3	1.9657e+06	2.14581e+06	2.20402e+06
D3Z8L7	D3Z8L7	RRAS_RAT	Rras	Ras-related protein R-Ras	1	LRLNVDEAFEQLVR	LRLNVDEAFEQLVR	3	LRLNVDEAFEQLVR3	3339.21	5864.87	10384.3
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	LRLPQVSPADSGEYVCR	LRLPQVSPADSGEYVC(UniMod:4)R	3	LRLPQVSPADSGEYVC(UniMod:4)R3	26040.3	24069.6	26700.4
Q3B8N7	Q3B8N7	T22D4_RAT	Tsc22d4	TSC22 domain family protein 4	1	LRMELVAPEETGK	LRMELVAPEETGK	3	LRMELVAPEETGK3	43255.3	34988.1	26923.6
P04904	P04904	GSTA3_RAT	Gsta3	Glutathione S-transferase alpha-3	1	LRNDGSLMFQQVPMVEIDGMK	LRNDGSLMFQQVPMVEIDGMK	3	LRNDGSLMFQQVPMVEIDGMK3	12616.3	16776.2	16128.3
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	LRNDSVIVDTFHGLFK	LRNDSVIVDTFHGLFK	3	LRNDSVIVDTFHGLFK3	28151.5	34209.1	37629
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	LRNDSVIVDTFHGLFK	LRNDSVIVDTFHGLFK	4	LRNDSVIVDTFHGLFK4	15651.6	30680.8	25479.5
Q9JL55	Q9JL55	GDE1_RAT	Gde1	Glycerophosphodiester phosphodiesterase 1	1	LRNEFPDER	LRNEFPDER	3	LRNEFPDER3	81868.3	84176.2	82512.2
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	LRNLAVGLFTHTPSLASLSLSSNLLGR	LRNLAVGLFTHTPSLASLSLSSNLLGR	4	LRNLAVGLFTHTPSLASLSLSSNLLGR4	39880.5	55710.4	11740.1
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	LRNPCPNK	LRNPC(UniMod:4)PNK	2	LRNPC(UniMod:4)PNK2			11800.1
Q62812	F1LNF0;Q63862;Q62812	MYH9_RAT	Myh9	Myosin-9	0	LRNWQWWR	LRNWQWWR	3	LRNWQWWR3	348986	627096	529596
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	LRNYYYDVVN	LRNYYYDVVN	2	LRNYYYDVVN2	3354.28		2011.21
P24473	P24473	GSTK1_RAT	Gstk1	Glutathione S-transferase kappa 1	1	LRPALLAGIMK	LRPALLAGIMK	2	LRPALLAGIMK2	2637.11	3879.43	1108.63
P24473	P24473	GSTK1_RAT	Gstk1	Glutathione S-transferase kappa 1	1	LRPALLAGIMK	LRPALLAGIMK	3	LRPALLAGIMK3	94983.6	77874.1	90660.9
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LRPAVPPLPMK	LRPAVPPLPMK	2	LRPAVPPLPMK2	7332.36	11664.1	7179.66
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LRPAVPPLPMK	LRPAVPPLPMK	3	LRPAVPPLPMK3	248616	298708	262489
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	LRPEDITQIQPQQLLLK	LRPEDITQIQPQQLLLK	3	LRPEDITQIQPQQLLLK3	1.11987e+06	1.04768e+06	1.18451e+06
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	LRPEDQAFWLQPK	LRPEDQAFWLQPK	3	LRPEDQAFWLQPK3	8556.49	4473.17	7568.41
P62749	P62749	HPCL1_RAT	Hpcal1	Hippocalcin-like protein 1	1	LRPEVLQDLR	LRPEVLQDLR	3	LRPEVLQDLR3	159353	144990	142816
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	LRPFLSQLGEILSPNLAAPER	LRPFLSQLGEILSPNLAAPER	3	LRPFLSQLGEILSPNLAAPER3	20283.6	16653	22645
A0A8I5ZT44	A0A8I5ZT44	A0A8I5ZT44_RAT	Tlcd3a	TLC domain containing 3A	1	LRPGWTDDDCLTVGTR	LRPGWTDDDC(UniMod:4)LTVGTR	3	LRPGWTDDDC(UniMod:4)LTVGTR3	66194.7	77657.5	66411.4
D3ZZ26	D3ZZ26	D3ZZ26_RAT	Ppp1r3d	Protein phosphatase 1, regulatory subunit 3D	1	LRPIIQR	LRPIIQR	2	LRPIIQR2	13665.9	14902.9	13345.4
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	LRPIPITASVEIQEPSSR	LRPIPITASVEIQEPSSR	3	LRPIPITASVEIQEPSSR3	445496	396752	467715
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	LRPIPITASVEIQEPSSR	LRPIPITASVEIQEPSSR	4	LRPIPITASVEIQEPSSR4	3813.72	2480.05	7234.42
G3V8G2	G3V8G2	G3V8G2_RAT	Psmd5	26S proteasome non-ATPase regulatory subunit 5	1	LRPLFSLLNQNNR	LRPLFSLLNQNNR	3	LRPLFSLLNQNNR3	47340.7	43281.7	44551
P61589	P61589;A0A8I6AN62	RHOA_RAT	Rhoa	Transforming protein RhoA	0	LRPLSYPDTDVILMCFSIDSPDSLENIPEK	LRPLSYPDTDVILMC(UniMod:4)FSIDSPDSLENIPEK	4	LRPLSYPDTDVILMC(UniMod:4)FSIDSPDSLENIPEK4	34499.3	24180.6	30925.4
D3ZRB3	D3ZRB3	D3ZRB3_RAT	Rhof	Ras homolog family member F, filopodia associated	1	LRPLSYQNTHLVLICYDVMNPTSYDNVLIK	LRPLSYQNTHLVLIC(UniMod:4)YDVMNPTSYDNVLIK	4	LRPLSYQNTHLVLIC(UniMod:4)YDVMNPTSYDNVLIK4	18846.3	11797	13590.7
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	LRPLYDIPYMFEAR	LRPLYDIPYMFEAR	3	LRPLYDIPYMFEAR3	152719	158541	119960
P38718	P38718	MPC2_RAT	Mpc2	Mitochondrial pyruvate carrier 2	1	LRPLYNHPAGPR	LRPLYNHPAGPR	3	LRPLYNHPAGPR3	78530.2	49312.3	49126.6
D3ZWA1	D3ZWA1	D3ZWA1_RAT	Mindy2	Ubiquitin carboxyl-terminal hydrolase	1	LRPPSDPETVYK	LRPPSDPETVYK	3	LRPPSDPETVYK3	61199.8	72585.4	65969.1
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	LRPPTCWGFTVVHETEK	LRPPTC(UniMod:4)WGFTVVHETEK	4	LRPPTC(UniMod:4)WGFTVVHETEK4	13674	6882.95	13156.4
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LRPPTQGYLSSR	LRPPTQGYLSSR	3	LRPPTQGYLSSR3	230287	203966	226965
A0A8I6GLQ4	A0A8I6GLQ4	A0A8I6GLQ4_RAT	Naip5	NLR family, apoptosis inhibitory protein 5	1	LRPQCEFLSGK	LRPQC(UniMod:4)EFLSGK	3	LRPQC(UniMod:4)EFLSGK3	7374.3	3832.15	2050.19
B0BNF1	B0BNF1	SEPT8_RAT	Septin8	Septin-8	1	LRPQTYDLQESNVHLK	LRPQTYDLQESNVHLK	3	LRPQTYDLQESNVHLK3	2121.11	968.35	2620.72
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	LRPRPYLPNVDEEVQIGHVPR	LRPRPYLPNVDEEVQIGHVPR	3	LRPRPYLPNVDEEVQIGHVPR3	47336	43945.7	31603.8
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	LRPRPYLPNVDEEVQIGHVPR	LRPRPYLPNVDEEVQIGHVPR	4	LRPRPYLPNVDEEVQIGHVPR4	5.00659e+06	6.91274e+06	6.95037e+06
F1M9D0	F1M9D0	F1M9D0_RAT	Map3k2	Mitogen activated protein kinase kinase kinase 2	1	LRPSAEELLR	LRPSAEELLR	3	LRPSAEELLR3	12412.4	11059.2	2596.92
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LRPSDASFLK	LRPSDASFLK	2	LRPSDASFLK2	33695.9	21527.9	19888.9
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	LRPSDASFLKDK	LRPSDASFLKDK	3	LRPSDASFLKDK3		16612.1	
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	LRPSGDDVELIGEEEDVSVYDIADHPDFR	LRPSGDDVELIGEEEDVSVYDIADHPDFR	4	LRPSGDDVELIGEEEDVSVYDIADHPDFR4	168490	174063	143997
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	LRPSNFR	LRPSNFR	2	LRPSNFR2	72551.2	66173.3	58408.9
Q924C3	Q924C3	ENPP1_RAT	Enpp1	Ectonucleotide pyrophosphatase/phosphodiesterase family member 1	1	LRPTEVPETYYSFNYEALAK	LRPTEVPETYYSFNYEALAK	3	LRPTEVPETYYSFNYEALAK3	6343.65	3933.44	4659.89
A0A8J8YNR6	A0A8J8YNR6	A0A8J8YNR6_RAT	Fxr2	FMR1 autosomal homolog 2	1	LRPVNPNPLATK	LRPVNPNPLATK	3	LRPVNPNPLATK3	17097.6	16919.2	26318
A0A8I6AEV8;D4A9P7	A0A8I6AEV8;A0A8I6ASA1;D4A9P7	A0A8I6AEV8_RAT;D4A9P7_RAT	Bola2;Bola2-ps1	BolA family member 2, pseudogene 1	0	LRQDLEAEHVEVEDTTLNR	LRQDLEAEHVEVEDTTLNR	3	LRQDLEAEHVEVEDTTLNR3	3814.76	5594.88	5418.46
A0A8I6AEV8;D4A9P7	A0A8I6AEV8;A0A8I6ASA1;D4A9P7	A0A8I6AEV8_RAT;D4A9P7_RAT	Bola2;Bola2-ps1	BolA family member 2, pseudogene 1	0	LRQDLEAEHVEVEDTTLNR	LRQDLEAEHVEVEDTTLNR	4	LRQDLEAEHVEVEDTTLNR4	45380.7	30653.7	45565.4
A0A8I5ZKY1	A0A8I5ZKY1	A0A8I5ZKY1_RAT	Rnf170	E3 ubiquitin-protein ligase RNF170	1	LRQDVNDYNR	LRQDVNDYNR	3	LRQDVNDYNR3	9875.6	8202.69	11524.1
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LRQEFAQHANAFHQWIQETR	LRQEFAQHANAFHQWIQETR	4	LRQEFAQHANAFHQWIQETR4	22511.3	34609.4	43204
D3ZV40	D3ZV40	D3ZV40_RAT	Unk	Unk zinc finger	1	LRQELDEANGTIK	LRQELDEANGTIK	3	LRQELDEANGTIK3	1517.41		5642.8
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	LRQELGICPAVK	LRQELGIC(UniMod:4)PAVK	3	LRQELGIC(UniMod:4)PAVK3	22678.4	15143.1	18950.5
D3ZGA5	D3ZGA5	D3ZGA5_RAT	Rilp	Rab interacting lysosomal protein	1	LRQELGSEPQEER	LRQELGSEPQEER	3	LRQELGSEPQEER3	15551.8	10662.8	12487
Q6MG12	Q6MG12	CF136_RAT		Uncharacterized protein C6orf136 homolog	1	LRQELPTLFLR	LRQELPTLFLR	3	LRQELPTLFLR3	12710.4	10278.8	7444.26
D3ZTC4	D3ZTC4	D3ZTC4_RAT	Ccdc88b	Coiled-coil domain containing 88B	1	LRQETQALSGQAK	LRQETQALSGQAK	3	LRQETQALSGQAK3	4361.19	4897.12	3190.49
Q3KRD5	Q3KRD5	TOM34_RAT	Tomm34	Mitochondrial import receptor subunit TOM34	1	LRQEVNQNMN	LRQEVNQNMN	2	LRQEVNQNMN2	5064.53	3898.07	4407.16
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	LRQHEAERQEEELR	LRQHEAERQEEELR	4	LRQHEAERQEEELR4	5375.42		9494.34
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LRQNLDGLLNQLK	LRQNLDGLLNQLK	3	LRQNLDGLLNQLK3	13160.2	15442.5	18117
Q9QZK5	Q9QZK5	HTRA1_RAT	Htra1	Serine protease HTRA1	1	LRQPPVIVLQR	LRQPPVIVLQR	3	LRQPPVIVLQR3	12195.3	25295	16004.8
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	LRQWNTLYLCGTDEYGTATETK	LRQWNTLYLC(UniMod:4)GTDEYGTATETK	3	LRQWNTLYLC(UniMod:4)GTDEYGTATETK3			4965.19
P63142	P63142	KCNA2_RAT	Kcna2	Potassium voltage-gated channel subfamily A member 2	1	LRRPVNVPLDIFSEEIR	LRRPVNVPLDIFSEEIR	4	LRRPVNVPLDIFSEEIR4	41193.2	50649.3	45360.6
B1H219	B1H219	B1H219_RAT	Dkk3	Dickkopf WNT signaling pathway inhibitor 3	1	LRSAVEEMEAEEAAAR	LRSAVEEMEAEEAAAR	3	LRSAVEEMEAEEAAAR3	2625.76		2287.95
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	LRSDDIYNQVSAYPLPEHR	LRSDDIYNQVSAYPLPEHR	3	LRSDDIYNQVSAYPLPEHR3	2568.13	2153.72	2572.09
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	LRSDDIYNQVSAYPLPEHR	LRSDDIYNQVSAYPLPEHR	4	LRSDDIYNQVSAYPLPEHR4	29744.7	32859.1	37629.6
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	LRSEGDNIVVGDK	LRSEGDNIVVGDK	3	LRSEGDNIVVGDK3	6870.62	20507.1	23259.1
Q6P6Q2	Q6P6Q2	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	1	LRSEIDNVK	LRSEIDNVK	2	LRSEIDNVK2	115846	106179	98537.6
Q6P6Q2	Q6P6Q2	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	1	LRSEIDNVKK	LRSEIDNVKK	2	LRSEIDNVKK2	31561.6	4903.56	11387.6
Q6P6Q2	Q6P6Q2	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	1	LRSEIDNVKK	LRSEIDNVKK	3	LRSEIDNVKK3	867254	384652	651195
A0A0G2K516	A0A0G2K516	A0A0G2K516_RAT	Stx11	Syntaxin 11	1	LRSMKEMSEQAEAQHGAHSAVAR	LRSMKEMSEQAEAQHGAHSAVAR	4	LRSMKEMSEQAEAQHGAHSAVAR4	10813.4	12071.5	
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	LRTEAQAQELR	LRTEAQAQELR	3	LRTEAQAQELR3	117300	151240	158749
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	LRTEECQLQLK	LRTEEC(UniMod:4)QLQLK	3	LRTEEC(UniMod:4)QLQLK3	5132.3	5244.55	
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	LRTEMEMGLR	LRTEMEMGLR	3	LRTEMEMGLR3	52711.2	49313.4	50798.1
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	LRTETGTPWK	LRTETGTPWK	3	LRTETGTPWK3	9913.86	6620.33	5099.15
P01946	P01946	HBA_RAT	Hba1	Hemoglobin subunit alpha-1/2	1	LRVDPVNFK	LRVDPVNFK	2	LRVDPVNFK2	52065.8	67719.5	50749.2
O35165	O35165	GOSR2_RAT	Gosr2	Golgi SNAP receptor complex member 2	1	LRVDQLK	LRVDQLK	2	LRVDQLK2	7170.71	7611.61	8480.85
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	LRVPAAYAGSLCGLCGNYNK	LRVPAAYAGSLC(UniMod:4)GLC(UniMod:4)GNYNK	3	LRVPAAYAGSLC(UniMod:4)GLC(UniMod:4)GNYNK3	251680	276470	285350
F7EZQ4	F7EZQ4	F7EZQ4_RAT	Fcgbpl1	Fc fragment of IgG binding protein-like 1	1	LRVPAAYAGTLCGLCGNYNK	LRVPAAYAGTLC(UniMod:4)GLC(UniMod:4)GNYNK	3	LRVPAAYAGTLC(UniMod:4)GLC(UniMod:4)GNYNK3	8199.74	6203.21	10920.6
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	LRVQEEEMELVK	LRVQEEEMELVK	3	LRVQEEEMELVK3	3123	7144.82	4628.38
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	LRYHGDPIPCPK	LRYHGDPIPC(UniMod:4)PK	3	LRYHGDPIPC(UniMod:4)PK3	58745.2	117954	122194
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	LRYPVTPELLER	LRYPVTPELLER	3	LRYPVTPELLER3	67732.2	86613.8	78829.1
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	LSAAEAQHR	LSAAEAQHR	2	LSAAEAQHR2			11200.6
Q4G050	Q4G050	MKNK1_RAT	Mknk1	MAP kinase-interacting serine/threonine-protein kinase 1	1	LSAAQVLQHPWVQGQAPER	LSAAQVLQHPWVQGQAPER	3	LSAAQVLQHPWVQGQAPER3	21271.7	22388.2	23450.1
Q62609	Q62609	NOE1_RAT	Olfm1	Noelin	1	LSAASGGTLDR	LSAASGGTLDR	2	LSAASGGTLDR2	7073.36	16166.1	11865
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	LSAAVSETVSQVPAPSNHTAAPPPGTER	LSAAVSETVSQVPAPSNHTAAPPPGTER	3	LSAAVSETVSQVPAPSNHTAAPPPGTER3	23847.8	31179.6	20354.7
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	LSAAVSETVSQVPAPSNHTAAPPPGTER	LSAAVSETVSQVPAPSNHTAAPPPGTER	4	LSAAVSETVSQVPAPSNHTAAPPPGTER4	16011.3	13617.9	10941.2
A0A8I6AAD8	A0A8I6AAD8	A0A8I6AAD8_RAT	Snx4	Sorting nexin 4	1	LSADNMDPDFVER	LSADNMDPDFVER	2	LSADNMDPDFVER2	21249.3	26804.5	22635
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	LSADYEK	LSADYEK	2	LSADYEK2	57739.3	62292.2	53557.5
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	LSAEAVFEK	LSAEAVFEK	2	LSAEAVFEK2	198757	203126	211492
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	LSAEDLVLEGAGLR	LSAEDLVLEGAGLR	2	LSAEDLVLEGAGLR2	248265	290054	287126
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	LSAEDLVLEGAGLR	LSAEDLVLEGAGLR	3	LSAEDLVLEGAGLR3	73541.4	80653.6	84721.9
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LSAEEAAIR	LSAEEAAIR	2	LSAEEAAIR2	271281	301426	277740
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	LSAEEMDER	LSAEEMDER	2	LSAEEMDER2	28645.5	36486.4	29007.6
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	LSAEILR	LSAEILR	2	LSAEILR2	97091.1	84267.5	57581.3
Q9QZL2	Q9QZL2	CHST3_RAT	Chst3	Carbohydrate sulfotransferase 3	1	LSAELGLR	LSAELGLR	2	LSAELGLR2	84437.2	75144.3	64992.4
A0A0U1RRU5	A0A0U1RRU5	A0A0U1RRU5_RAT	Tab1	TGF-beta activated kinase 1/MAP3K7 binding protein 1	1	LSAELLLGQLNTEHTDADVRR	LSAELLLGQLNTEHTDADVRR	4	LSAELLLGQLNTEHTDADVRR4	5322.69	9057.28	
D3ZG43	D3ZG43	D3ZG43_RAT	Ndufs3	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial	1	LSAFGEYVAEILPK	LSAFGEYVAEILPK	2	LSAFGEYVAEILPK2	25786.8	26325.4	28257.3
Q5XI39	Q5XI39	Q5XI39_RAT	Cryzl1	Crystallin zeta like 1	1	LSAGVFRPLLDEPIPLYEAK	LSAGVFRPLLDEPIPLYEAK	3	LSAGVFRPLLDEPIPLYEAK3	2570.67		3005.48
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	LSAIPNDTAAK	LSAIPNDTAAK	2	LSAIPNDTAAK2	59644.8	55570.9	62475.7
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	LSAIYGGTYMLNKPIEEIIVQNGK	LSAIYGGTYMLNKPIEEIIVQNGK	3	LSAIYGGTYMLNKPIEEIIVQNGK3	18696.2	14267	10541.3
P50398	P50398	GDIA_RAT	Gdi1	Rab GDP dissociation inhibitor alpha	1	LSAIYGGTYMLNKPVDDIIMENGK	LSAIYGGTYMLNKPVDDIIMENGK	3	LSAIYGGTYMLNKPVDDIIMENGK3	60738	56455.5	73788.5
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	LSALADLEEWEELEK	LSALADLEEWEELEK	2	LSALADLEEWEELEK2	11669.6	8461.68	6134.14
D3ZQV2	D3ZQV2	D3ZQV2_RAT	Lrig2	Leucine-rich repeats and immunoglobulin-like domains 2	1	LSALDLSYNQLTR	LSALDLSYNQLTR	2	LSALDLSYNQLTR2		2068.8	5274.09
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	LSALDPMMEQEMEEIR	LSALDPMMEQEMEEIR	2	LSALDPMMEQEMEEIR2	72485.8	63861.4	65250.4
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	LSALDPMMEQEMEEIR	LSALDPMMEQEMEEIR	3	LSALDPMMEQEMEEIR3	23727.8	13559.9	21946.5
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	LSALFINLISDPSR	LSALFINLISDPSR	2	LSALFINLISDPSR2	22976.8	16272.4	22529.7
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	LSALLQETK	LSALLQETK	2	LSALLQETK2	371723	403636	417229
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	LSALQSTYDK	LSALQSTYDK	2	LSALQSTYDK2	50766.8	62854.3	65863.2
D4AD75	D4AD75	D4AD75_RAT	Dpy19l1	Dpy-19 like C-mannosyltransferase 1	1	LSALRPVVNHPHYEDAGLR	LSALRPVVNHPHYEDAGLR	3	LSALRPVVNHPHYEDAGLR3	3972.63		2107.44
D4AD75	D4AD75	D4AD75_RAT	Dpy19l1	Dpy-19 like C-mannosyltransferase 1	1	LSALRPVVNHPHYEDAGLR	LSALRPVVNHPHYEDAGLR	4	LSALRPVVNHPHYEDAGLR4	6719.52		6752.39
A0A8I5ZU29	A0A8I5ZU29;B4F777	A0A8I5ZU29_RAT	LOC120097335	High mobility group nucleosome-binding domain-containing protein 5-like	0	LSAMPVPFTPELKPK	LSAMPVPFTPELKPK	3	LSAMPVPFTPELKPK3	9706.05	6936.64	19768.7
A4V8B4	A4V8B4	SAV1_RAT	Sav1	Protein salvador homolog 1	1	LSAPSSYLVR	LSAPSSYLVR	2	LSAPSSYLVR2	143307	141061	130490
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	LSAQAQVAEDILDK	LSAQAQVAEDILDK	2	LSAQAQVAEDILDK2	25038.9	12372.2	9165.76
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	LSAQAQVAEDILDKYR	LSAQAQVAEDILDKYR	3	LSAQAQVAEDILDKYR3	97129.9	92723.9	89961.5
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	LSAQSNSNNIEPAR	LSAQSNSNNIEPAR	2	LSAQSNSNNIEPAR2	6438.61	11210.7	10133.1
A0A8I6AA52	A0A8I6AA52	A0A8I6AA52_RAT	Wdr48	WD repeat-containing protein 48	1	LSASDMLQVR	LSASDMLQVR	2	LSASDMLQVR2	7777.13	7423.64	8148.4
A0A8I5ZV77	A0A8I5ZV77	A0A8I5ZV77_RAT	Mrps36	Mitochondrial ribosomal protein S36	1	LSASDTLR	LSASDTLR	2	LSASDTLR2	93925.7	100699	110668
P48450	P48450	LSS_RAT	Lss	Lanosterol synthase	1	LSASEDPLVQSLR	LSASEDPLVQSLR	2	LSASEDPLVQSLR2	6934.42	6339.72	9296.43
Q9R010	Q9R010	CIB1_RAT	Cib1	Calcium and integrin-binding protein 1	1	LSASEMK	LSASEMK	2	LSASEMK2	164166	166022	127702
Q68FV8	Q68FV8	UBTD1_RAT	Ubtd1	Ubiquitin domain-containing protein 1	1	LSASLPDTVGQLK	LSASLPDTVGQLK	2	LSASLPDTVGQLK2	30124.9	17750.2	26753.1
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	LSASPQELGKPYLESFQPNLHSTK	LSASPQELGKPYLESFQPNLHSTK	4	LSASPQELGKPYLESFQPNLHSTK4	30984.4	17450.8	24834.5
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	LSATLLDTPNPVPQQSTADTLK	LSATLLDTPNPVPQQSTADTLK	3	LSATLLDTPNPVPQQSTADTLK3	29153.6	36995.5	31748.3
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	LSATSTWLEDEGFGATTVMLK	LSATSTWLEDEGFGATTVMLK	3	LSATSTWLEDEGFGATTVMLK3	102094	114222	107582
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	LSATVTEAFVR	LSATVTEAFVR	2	LSATVTEAFVR2	57141.6	58019.2	51806.3
P04041	P04041	GPX1_RAT	Gpx1	Glutathione peroxidase 1	1	LSAVAQSTVYAFSAR	LSAVAQSTVYAFSAR	2	LSAVAQSTVYAFSAR2	37186.3	30663.5	32909.9
P04041	P04041	GPX1_RAT	Gpx1	Glutathione peroxidase 1	1	LSAVAQSTVYAFSAR	LSAVAQSTVYAFSAR	3	LSAVAQSTVYAFSAR3	12736.7	13998.7	12832.9
P04041	P04041	GPX1_RAT	Gpx1	Glutathione peroxidase 1	1	LSAVAQSTVYAFSARPLAGGEPVSLGSLR	LSAVAQSTVYAFSARPLAGGEPVSLGSLR	3	LSAVAQSTVYAFSARPLAGGEPVSLGSLR3		8244.65	9117.92
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LSAVFVK	LSAVFVK	2	LSAVFVK2	46952.1	39066.3	37942.9
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	LSAYAYDIEDGK	LSAYAYDIEDGK	2	LSAYAYDIEDGK2	4633.92	5574.61	5549.65
F1LU27	F1LU27	F1LU27_RAT	Focad	Focadhesin	1	LSAYLDESGSQSR	LSAYLDESGSQSR	2	LSAYLDESGSQSR2	43734.1	38353.4	33614.9
A0A8I6ALW9	A0A8I6ALW9	A0A8I6ALW9_RAT	ENSRNOG00000065952	Ig-like domain-containing protein	1	LSCAASGFNFNDYWMGWVR	LSC(UniMod:4)AASGFNFNDYWMGWVR	3	LSC(UniMod:4)AASGFNFNDYWMGWVR3	14713.7	18367.2	11532.7
A0A8I6AP25	A0A8I6AD89;A0A8I6AP25	A0A8I6AP25_RAT	ENSRNOG00000065181	Ig-like domain-containing protein	0	LSCAASGFTFSDYYMAWVR	LSC(UniMod:4)AASGFTFSDYYMAWVR	3	LSC(UniMod:4)AASGFTFSDYYMAWVR3	17197.7	19685.1	12967.3
A0A8I6AEB7	A0A8I6AEB7	A0A8I6AEB7_RAT	ENSRNOG00000062762	Ig-like domain-containing protein	1	LSCAASGFTFSNYDMAWVR	LSC(UniMod:4)AASGFTFSNYDMAWVR	3	LSC(UniMod:4)AASGFTFSNYDMAWVR3	47803.2	54349.5	57263.9
A0A8I6AEV5	A0A8I6AEV5	A0A8I6AEV5_RAT	ENSRNOG00000063148	Ig-like domain-containing protein	1	LSCAASGFTFSNYGMAWVR	LSC(UniMod:4)AASGFTFSNYGMAWVR	3	LSC(UniMod:4)AASGFTFSNYGMAWVR3	34287.1	26120.9	57302.3
F1LYU3	F1LYU3	F1LYU3_RAT	ENSRNOG00000062976	Ig-like domain-containing protein	1	LSCAASGFTFSNYGMHWIR	LSC(UniMod:4)AASGFTFSNYGMHWIR	3	LSC(UniMod:4)AASGFTFSNYGMHWIR3	20203.2	29484.6	22722.5
A0A8I6AM09	A0A8I6AM09;A0A8I6AH36	A0A8I6AM09_RAT	ENSRNOG00000063791	Ig-like domain-containing protein	0	LSCAASGFTFSSFPMAWVR	LSC(UniMod:4)AASGFTFSSFPMAWVR	3	LSC(UniMod:4)AASGFTFSSFPMAWVR3	21557	20208.2	14156.4
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	LSCDCQGIPFPK	LSC(UniMod:4)DC(UniMod:4)QGIPFPK	2	LSC(UniMod:4)DC(UniMod:4)QGIPFPK2	39879	48828.5	37759.7
A0A8I6A7R6	A0A8I6A7R6	A0A8I6A7R6_RAT	ENSRNOG00000065040	Ig-like domain-containing protein	1	LSCEASGFTFSDFYMEWIR	LSC(UniMod:4)EASGFTFSDFYMEWIR	3	LSC(UniMod:4)EASGFTFSDFYMEWIR3	25003.1	20393.8	18674.6
D3ZPA1	D3ZPA1	D3ZPA1_RAT	Gcc1	GRIP and coiled-coil domain containing 1	1	LSCEELENQHQQEAEDWK	LSC(UniMod:4)EELENQHQQEAEDWK	3	LSC(UniMod:4)EELENQHQQEAEDWK3	4267		6846.67
Q0VGK8	Q0VGK8	Q0VGK8_RAT	Cdc42ep3	CDC42 effector protein 3	1	LSCEPVMEEK	LSC(UniMod:4)EPVMEEK	2	LSC(UniMod:4)EPVMEEK2	9762.21	4592.73	1914.39
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LSCLPAFK	LSC(UniMod:4)LPAFK	2	LSC(UniMod:4)LPAFK2	171434	209634	202906
Q5FVF9	Q5FVF9	BTD_RAT	Btd	Biotinidase	1	LSCMAIK	LSC(UniMod:4)MAIK	2	LSC(UniMod:4)MAIK2	222235	181599	177696
A0A8I6AJW1	A0A8I6AJW1	A0A8I6AJW1_RAT	Rnf121	Ring finger protein 121	1	LSCNHVFHEFCIR	LSC(UniMod:4)NHVFHEFC(UniMod:4)IR	3	LSC(UniMod:4)NHVFHEFC(UniMod:4)IR3	5041.21	5115.47	1636.46
A0A8I6AJW1	A0A8I6AJW1	A0A8I6AJW1_RAT	Rnf121	Ring finger protein 121	1	LSCNHVFHEFCIR	LSC(UniMod:4)NHVFHEFC(UniMod:4)IR	4	LSC(UniMod:4)NHVFHEFC(UniMod:4)IR4	4353.25	4558.73	1920.37
A0A8I6GL55	A0A8I6GL55	A0A8I6GL55_RAT	ENSRNOG00000065406	Ig-like domain-containing protein	1	LSCSASGFTFSSYGMHWIR	LSC(UniMod:4)SASGFTFSSYGMHWIR	3	LSC(UniMod:4)SASGFTFSSYGMHWIR3	17987.5	20746.6	15819.4
Q8R553	Q8R553	CSTN3_RAT	Clstn3	Calsyntenin-3	1	LSCSEMNGR	LSC(UniMod:4)SEMNGR	2	LSC(UniMod:4)SEMNGR2	1718.45	1415.99	1807.51
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	LSCSLPGHELDVR	LSC(UniMod:4)SLPGHELDVR	3	LSC(UniMod:4)SLPGHELDVR3	18112.5	16719.6	14794.1
E9PSU8	E9PSU8	E9PSU8_RAT	AABR07034730.3	Ig-like domain-containing protein	1	LSCTLSSGNIENNYVHWYQQYEGR	LSC(UniMod:4)TLSSGNIENNYVHWYQQYEGR	3	LSC(UniMod:4)TLSSGNIENNYVHWYQQYEGR3	58277.8	47883.9	60273.3
F1M0U4	F1M0U4	F1M0U4_RAT	ENSRNOG00000066892	Ig-like domain-containing protein	1	LSCVASGFTFSDFFMDWVR	LSC(UniMod:4)VASGFTFSDFFMDWVR	3	LSC(UniMod:4)VASGFTFSDFFMDWVR3	20432.8		
A0A8I6A938	A0A8I6A938	A0A8I6A938_RAT	ENSRNOG00000062915	Ig-like domain-containing protein	1	LSCVASGFTFSNYGMNWIR	LSC(UniMod:4)VASGFTFSNYGMNWIR	3	LSC(UniMod:4)VASGFTFSNYGMNWIR3	12713.1	13935.8	20203.2
A0A8I6A6C3	A0A8I6A6C3	A0A8I6A6C3_RAT	ENSRNOG00000067603	Ig-like domain-containing protein	1	LSCVASGFTFSSYNMHWIR	LSC(UniMod:4)VASGFTFSSYNMHWIR	3	LSC(UniMod:4)VASGFTFSSYNMHWIR3	28456.6	31360	17859.7
M0RCL7	M0RCL7	M0RCL7_RAT	ENSRNOG00000069838	Ig-like domain-containing protein	1	LSCVASGYTFSNYWMDWVR	LSC(UniMod:4)VASGYTFSNYWMDWVR	3	LSC(UniMod:4)VASGYTFSNYWMDWVR3	10329.1	6949.39	8574.48
P37996	P37996	ARL3_RAT	Arl3	ADP-ribosylation factor-like protein 3	1	LSCVPVLVFANK	LSC(UniMod:4)VPVLVFANK	2	LSC(UniMod:4)VPVLVFANK2	7121.91	9415.6	
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	LSDASPVEDEQFVPAPLSVAETSSSVR	LSDASPVEDEQFVPAPLSVAETSSSVR	3	LSDASPVEDEQFVPAPLSVAETSSSVR3	6056.11	4167.27	8061.81
A0A8I6G9X6	A0A8I6G9X6	A0A8I6G9X6_RAT	Kntc1	Kinetochore associated 1	1	LSDDEIYSLR	LSDDEIYSLR	2	LSDDEIYSLR2	8628.3	5279.54	
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LSDDNTIGQEEIQQR	LSDDNTIGQEEIQQR	2	LSDDNTIGQEEIQQR2	378267	362196	413688
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LSDDNTIGQEEIQQR	LSDDNTIGQEEIQQR	3	LSDDNTIGQEEIQQR3	63068.7	67272.3	88526.8
A0A8I6A829	A0A8I6A829;A0A8I6ANH8	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	0	LSDEDLFK	LSDEDLFK	2	LSDEDLFK2	64662	63893.8	56002.4
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	LSDEDLYK	LSDEDLYK	2	LSDEDLYK2	26511	34509.4	33019.3
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	LSDEILIDILTR	LSDEILIDILTR	2	LSDEILIDILTR2	73693.3	82644.6	59051.9
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	LSDEILIDILTR	LSDEILIDILTR	3	LSDEILIDILTR3	9416.51	5737.59	7530.38
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	LSDEKDLGK	LSDEKDLGK	2	LSDEKDLGK2	10910.4	4531.02	
A0A8I6AKB0	A0A8I6AKB0	A0A8I6AKB0_RAT	Asmtl	Acetylserotonin O-methyltransferase-like	1	LSDELVQEHVEGGEPWDK	LSDELVQEHVEGGEPWDK	3	LSDELVQEHVEGGEPWDK3	12500.3	16190.2	17046.1
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	LSDESLDSFLIELEK	LSDESLDSFLIELEK	2	LSDESLDSFLIELEK2	13417.7	3402.81	1898.14
P31325	P31325	PHKG2_RAT	Phkg2	Phosphorylase b kinase gamma catalytic chain, liver/testis isoform	1	LSDFGFSCHLEPGEK	LSDFGFSC(UniMod:4)HLEPGEK	3	LSDFGFSC(UniMod:4)HLEPGEK3	24325.5	21987.5	26046
A4GW50	A4GW50;A0A8I5ZLY4	A4GW50_RAT	Stk38l	Serine/threonine kinase 38 like	0	LSDFGLCTGLK	LSDFGLC(UniMod:4)TGLK	2	LSDFGLC(UniMod:4)TGLK2	7078.21	7522.35	5245.25
A0A8I5ZKJ9;A0A8I6AJD2;A0A8I6G980	A0A8I6G980;A0A8I5ZKJ9;A0A8I6AJD2	A0A8I5ZKJ9_RAT;A0A8I6AJD2_RAT;A0A8I6G980_RAT	ENSRNOG00000070867;LOC100911984;LOC103690174	Uncharacterized protein	0	LSDFGLSK	LSDFGLSK	2	LSDFGLSK2	172863	160292	151427
A0A8I6A9E8	A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	1	LSDFNIIDTLGVGGFGR	LSDFNIIDTLGVGGFGR	2	LSDFNIIDTLGVGGFGR2	15088.3	13743.5	9786.28
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	LSDFWQQSK	LSDFWQQSK	2	LSDFWQQSK2	346225	366349	405730
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	LSDGFNGADLR	LSDGFNGADLR	2	LSDGFNGADLR2	100471	94617.4	126613
A0A8I5ZNG4	A0A8I5ZNG4	A0A8I5ZNG4_RAT	Rictor	RPTOR independent companion of MTOR, complex 2	1	LSDGFVAAEAK	LSDGFVAAEAK	2	LSDGFVAAEAK2	3854.86	2794.65	
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LSDGNEYLFQAK	LSDGNEYLFQAK	2	LSDGNEYLFQAK2	370551	405910	376114
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LSDGNEYLFQAK	LSDGNEYLFQAK	3	LSDGNEYLFQAK3	9347.85		
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	LSDGQSFSQSDLQAGR	LSDGQSFSQSDLQAGR	2	LSDGQSFSQSDLQAGR2	53688.2	45662.3	36668.4
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	LSDGQSFSQSDLQAGR	LSDGQSFSQSDLQAGR	3	LSDGQSFSQSDLQAGR3	10686.5	12686.2	14842.6
P63039	P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	1	LSDGVAVLK	LSDGVAVLK	1	LSDGVAVLK1	9985.97	10977.4	19148.7
P63039	P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	1	LSDGVAVLK	LSDGVAVLK	2	LSDGVAVLK2	664902	723311	1.03038e+06
B2GV15	B2GV15	B2GV15_RAT	Dbt	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	LSDIGEGIR	LSDIGEGIR	2	LSDIGEGIR2	15991.6	16650.9	10890.8
P20788	P20788	UCRI_RAT	Uqcrfs1	Cytochrome b-c1 complex subunit Rieske, mitochondrial	1	LSDIPEGK	LSDIPEGK	2	LSDIPEGK2	383258	374611	301903
O88658	O88658	KIF1B_RAT	Kif1b	Kinesin-like protein KIF1B	1	LSDISPIGR	LSDISPIGR	2	LSDISPIGR2	16471.4	8708.19	13754.9
Q63525	Q63525	NUDC_RAT	Nudc	Nuclear migration protein nudC	1	LSDLDSETR	LSDLDSETR	2	LSDLDSETR2	31428.4	29644	25032.5
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	LSDLLAPISEQIQEVITFR	LSDLLAPISEQIQEVITFR	3	LSDLLAPISEQIQEVITFR3	104084	1092.3	2462.35
A2RRU1	A2RRU1	GYS1_RAT	Gys1	Glycogen [starch] synthase, muscle	1	LSDLLDWK	LSDLLDWK	2	LSDLLDWK2	59583.9	61287.9	68338.3
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	LSDLQESINQALDHVR	LSDLQESINQALDHVR	2	LSDLQESINQALDHVR2	1835.66		
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	LSDLQESINQALDHVR	LSDLQESINQALDHVR	3	LSDLQESINQALDHVR3	33154.7	37076.5	24183.5
A0A8I6ADN8	A0A8I6ADN8	A0A8I6ADN8_RAT	Dock10	Dedicator of cytokinesis 10	1	LSDLYYDIHR	LSDLYYDIHR	3	LSDLYYDIHR3		3477.66	
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	LSDMPLK	LSDMPLK	2	LSDMPLK2	195769	169538	196522
F1LU27	F1LU27	F1LU27_RAT	Focad	Focadhesin	1	LSDMSGQQMSLLLMK	LSDMSGQQMSLLLMK	2	LSDMSGQQMSLLLMK2		6376.28	
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	LSDNMFAR	LSDNMFAR	1	LSDNMFAR1	38421.5	19172.7	
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	LSDNMFAR	LSDNMFAR	2	LSDNMFAR2	4.98835e+06	3.91728e+06	3.77996e+06
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	LSDNQNK	LSDNQNK	2	LSDNQNK2		14180.9	49589.8
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	LSDNQNKDQVTTLEVHVCDCEGTVNNCMK	LSDNQNKDQVTTLEVHVC(UniMod:4)DC(UniMod:4)EGTVNNC(UniMod:4)MK	4	LSDNQNKDQVTTLEVHVC(UniMod:4)DC(UniMod:4)EGTVNNC(UniMod:4)MK4	21469.7	17166	12540.3
A0A8I6AM23	A0A8I6AM23	A0A8I6AM23_RAT	Jak1	Tyrosine-protein kinase	1	LSDPGIPVSVLTR	LSDPGIPVSVLTR	2	LSDPGIPVSVLTR2	10747.9	8994.01	16972.5
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	LSDPGISITVLPK	LSDPGISITVLPK	2	LSDPGISITVLPK2	67091.7	69868	54490.4
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	LSDPGVGQGALSR	LSDPGVGQGALSR	2	LSDPGVGQGALSR2	16790.4	16429.3	8132.44
D4A471	D4A471	D4A471_RAT	Cmc2	COX assembly mitochondrial protein	1	LSDPPEETGR	LSDPPEETGR	2	LSDPPEETGR2	35548.4	32208.9	29213.4
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	LSDPSDLPR	LSDPSDLPR	2	LSDPSDLPR2	11722.6	20466.6	15141.4
B0BN68	B0BN68	B0BN68_RAT	Mrps9	Mitochondrial ribosomal protein S9	1	LSDQDYTQFIR	LSDQDYTQFIR	2	LSDQDYTQFIR2	5536.66	3101.12	2312.96
G3V7W1	G3V7W1	PDCD6_RAT	Pdcd6	Programmed cell death protein 6	1	LSDQFHDILIR	LSDQFHDILIR	2	LSDQFHDILIR2	2812.75	3187.01	
G3V7W1	G3V7W1	PDCD6_RAT	Pdcd6	Programmed cell death protein 6	1	LSDQFHDILIR	LSDQFHDILIR	3	LSDQFHDILIR3	44000.4	31973.8	31273.3
Q66HA4	Q66HA4	TAXB1_RAT	Tax1bp1	Tax1-binding protein 1 homolog	1	LSDQSASSNGVFTK	LSDQSASSNGVFTK	2	LSDQSASSNGVFTK2	1512.28	3735.59	
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	LSDQTVLFQGAGEAALGIAHLIVMAMEK	LSDQTVLFQGAGEAALGIAHLIVMAMEK	3	LSDQTVLFQGAGEAALGIAHLIVMAMEK3	4265.56		
D3ZCT7	D3ZCT7	D3ZCT7_RAT	Sec23b	Protein transport protein SEC23	1	LSDSFSLYPQFMFHLR	LSDSFSLYPQFMFHLR	3	LSDSFSLYPQFMFHLR3	6256.91	7278.04	2811.19
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	LSDSGFK	LSDSGFK	1	LSDSGFK1	1.34964e+06	1.24993e+06	1.39266e+06
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	LSDSMAASSEGER	LSDSMAASSEGER	2	LSDSMAASSEGER2	4810.36	3525.21	4617.62
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	LSDSMAASSEGERK	LSDSMAASSEGERK	3	LSDSMAASSEGERK3	7843.58	8858.91	8489.45
Q4V8H8	Q4V8H8	EHD2_RAT	Ehd2	EH domain-containing protein 2	1	LSDVDRDGMLDDEEFALASHLIEAK	LSDVDRDGMLDDEEFALASHLIEAK	4	LSDVDRDGMLDDEEFALASHLIEAK4	3340.35	2476	2114.02
D4A6K4	D4A6K4	D4A6K4_RAT	Golga1	Golgin A1	1	LSDYAEQVR	LSDYAEQVR	2	LSDYAEQVR2	3354.24	4033.45	4185.67
D3ZFQ8	D3ZFQ8	D3ZFQ8_RAT	Cyc1	Cytochrome c-1	1	LSDYFPK	LSDYFPK	2	LSDYFPK2	65626.6	46579.7	61989.8
D3ZFQ8	D3ZFQ8	D3ZFQ8_RAT	Cyc1	Cytochrome c-1	1	LSDYFPKPYPNPEAAR	LSDYFPKPYPNPEAAR	2	LSDYFPKPYPNPEAAR2	8886.04	13833.8	16486.6
D3ZFQ8	D3ZFQ8	D3ZFQ8_RAT	Cyc1	Cytochrome c-1	1	LSDYFPKPYPNPEAAR	LSDYFPKPYPNPEAAR	3	LSDYFPKPYPNPEAAR3	177150	173539	167728
D3ZRJ7	D3ZRJ7	D3ZRJ7_RAT	Lrrk1	non-specific serine/threonine protein kinase	1	LSDYGISR	LSDYGISR	2	LSDYGISR2	4847.9	2779.7	4247.2
B2GV38	B2GV38	UBL4A_RAT	Ubl4a	Ubiquitin-like protein 4A	1	LSDYNIGPNSK	LSDYNIGPNSK	2	LSDYNIGPNSK2	45088.3	47187.1	41708.3
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	LSEAEFEVLK	LSEAEFEVLK	2	LSEAEFEVLK2	1.76546e+06	1.76428e+06	1.7266e+06
Q6U6G5	Q6U6G5;D4AA59	ZC3HF_RAT	Zc3h15	Zinc finger CCCH domain-containing protein 15	0	LSEASGGLAENGER	LSEASGGLAENGER	2	LSEASGGLAENGER2	1003.75	2395.58	3372.11
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	LSECEEQAK	LSEC(UniMod:4)EEQAK	2	LSEC(UniMod:4)EEQAK2	6332.24		31251.4
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	LSECLQK	LSEC(UniMod:4)LQK	2	LSEC(UniMod:4)LQK2	40742.5	38713.7	35305.6
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	LSECNKENTLHGYGTQK	LSEC(UniMod:4)NKENTLHGYGTQK	4	LSEC(UniMod:4)NKENTLHGYGTQK4	4673.82	5627.07	13625.2
A0A0G2JWD0	A0A0G2JWD0	A0A0G2JWD0_RAT	Prom1	Prominin 1	1	LSEDIVK	LSEDIVK	2	LSEDIVK2	24810.8	27273.8	27136.2
A0A0G2JWD0	A0A0G2JWD0	A0A0G2JWD0_RAT	Prom1	Prominin 1	1	LSEDIVKELEK	LSEDIVKELEK	3	LSEDIVKELEK3	11719.7	12749.6	13773
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	LSEDSLTK	LSEDSLTK	2	LSEDSLTK2	163333	160204	152001
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	LSEDSLTKQPEEVFDVLEK	LSEDSLTKQPEEVFDVLEK	3	LSEDSLTKQPEEVFDVLEK3	23566.4	16459.1	19978.6
F7EKI5	F7EKI5	F7EKI5_RAT	Pcdh18	Protocadherin 18	1	LSEDVADVLLK	LSEDVADVLLK	2	LSEDVADVLLK2	39530.6	27002.2	45396.9
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	LSEEAETRPTTPNR	LSEEAETRPTTPNR	3	LSEEAETRPTTPNR3	92440.8	62321.7	85788.1
Q1RP74	Q1RP74	Q1RP74_RAT	Tbcb	Tubulin folding cofactor B	1	LSEEEAQASAISVGSR	LSEEEAQASAISVGSR	2	LSEEEAQASAISVGSR2	107766	98801.3	82199.2
Q1RP74	Q1RP74	Q1RP74_RAT	Tbcb	Tubulin folding cofactor B	1	LSEEEAQASAISVGSR	LSEEEAQASAISVGSR	3	LSEEEAQASAISVGSR3	12649.1	8794.24	11447.3
Q62703	Q62703	RCN2_RAT	Rcn2	Reticulocalbin-2	1	LSEEEILENQDLFLTSEATDYGR	LSEEEILENQDLFLTSEATDYGR	3	LSEEEILENQDLFLTSEATDYGR3	12787.3	13102.4	5163.9
Q5M849	Q5M849	Q5M849_RAT	Ifi35	Interferon-induced protein 35	1	LSEEELLDK	LSEEELLDK	2	LSEEELLDK2	35581.9	22802	29397.3
D3ZFJ3	D3ZFJ3	3BP1_RAT	Sh3bp1	SH3 domain-binding protein 1	1	LSEEELPAILK	LSEEELPAILK	2	LSEEELPAILK2	15453.2	11480.1	18387.1
A0A8I5ZZZ6	A0A8I5ZZZ6	A0A8I5ZZZ6_RAT	Riok3	Serine/threonine-protein kinase RIO3	1	LSEEEMK	LSEEEMK	2	LSEEEMK2	66444.7	56852.6	63303.4
A0A0G2K1P8	A0A0G2K1P8;Q91Z80	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	0	LSEEIEK	LSEEIEK	2	LSEEIEK2	66321.7	56552	62953.1
Q4V7C7	Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	1	LSEELSGGR	LSEELSGGR	2	LSEELSGGR2	311135	293047	352583
P0C0A2	P0C0A2	VPS36_RAT	Vps36	Vacuolar protein-sorting-associated protein 36	1	LSEEMTQR	LSEEMTQR	2	LSEEMTQR2	6437.77	3814.27	3371.98
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	LSEENIDSSAGNGVLTK	LSEENIDSSAGNGVLTK	2	LSEENIDSSAGNGVLTK2	9939.26	10659.2	8537.11
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	LSEEPTFLAVAENQPPGTSVGR	LSEEPTFLAVAENQPPGTSVGR	3	LSEEPTFLAVAENQPPGTSVGR3		12114.5	7902.75
P25236	P25236	SEPP1_RAT	Selenop	Selenoprotein P	1	LSEESGAATSSCCCHCR	LSEESGAATSSC(UniMod:4)C(UniMod:4)C(UniMod:4)HC(UniMod:4)R	3	LSEESGAATSSC(UniMod:4)C(UniMod:4)C(UniMod:4)HC(UniMod:4)R3	50023.4	41021.9	49427.5
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	LSEEVNDK	LSEEVNDK	2	LSEEVNDK2	44138.1	44327.3	46487.5
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	LSEFIPAVFLLK	LSEFIPAVFLLK	2	LSEFIPAVFLLK2	8158.84	4806.64	6804.39
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	LSEFVVTK	LSEFVVTK	2	LSEFVVTK2	5895.13		
P18421	P18421	PSB1_RAT	Psmb1	Proteasome subunit beta type-1	1	LSEGFSIHTR	LSEGFSIHTR	2	LSEGFSIHTR2	269105	239924	297618
P18421	P18421	PSB1_RAT	Psmb1	Proteasome subunit beta type-1	1	LSEGFSIHTR	LSEGFSIHTR	3	LSEGFSIHTR3	1.99692e+06	2.11232e+06	2.12356e+06
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	LSEGQEEENLENEMK	LSEGQEEENLENEMK	2	LSEGQEEENLENEMK2	3315.68	2991.85	3446.38
Q4FZY0	Q4FZY0	EFHD2_RAT	Efhd2	EF-hand domain-containing protein D2	1	LSEIDVSTEGVK	LSEIDVSTEGVK	2	LSEIDVSTEGVK2	86739.7	70177.8	76094.8
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	LSEISGIPLEDIEFAK	LSEISGIPLEDIEFAK	2	LSEISGIPLEDIEFAK2	14650.2	33440.3	13313.1
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	LSEITDLK	LSEITDLK	2	LSEITDLK2	15394.8	16496.8	21195.6
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	LSEITDLKDELLAAEHSQSK	LSEITDLKDELLAAEHSQSK	3	LSEITDLKDELLAAEHSQSK3	2829.99		
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	LSEIVTLAK	LSEIVTLAK	2	LSEIVTLAK2	137476	154644	156553
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	LSEKETEELMAWMR	LSEKETEELMAWMR	3	LSEKETEELMAWMR3	5189.55	8379.65	8017.6
P63025	P63045;P63025;Q63666	VAMP3_RAT	Vamp3	Vesicle-associated membrane protein 3	0	LSELDDR	LSELDDR	2	LSELDDR2	235645	195847	208893
P63025	P63045;P63025	VAMP3_RAT	Vamp3	Vesicle-associated membrane protein 3	0	LSELDDRADALQAGASQFETSAAK	LSELDDRADALQAGASQFETSAAK	3	LSELDDRADALQAGASQFETSAAK3	112301	128176	113316
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LSELNQK	LSELNQK	1	LSELNQK1	6848.04	8121.89	10537.9
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LSELNQK	LSELNQK	2	LSELNQK2	664568	596824	730246
Q5I0E7	Q5I0E7	TMED9_RAT	Tmed9	Transmembrane emp24 domain-containing protein 9	1	LSELQLR	LSELQLR	2	LSELQLR2	646772	500820	661940
Q9Z2J5	Q9Z2J5	VAMP5_RAT	Vamp5	Vesicle-associated membrane protein 5	1	LSELQQR	LSELQQR	2	LSELQQR2	131911	123570	120442
D3ZYB4	D3ZYB4	D3ZYB4_RAT	Lpin2	phosphatidate phosphatase	1	LSELVEHVFPLLNK	LSELVEHVFPLLNK	3	LSELVEHVFPLLNK3	12960.1	12126.8	14935.4
Q9EQV6	Q9EQV6	TPP1_RAT	Tpp1	Tripeptidyl-peptidase 1	1	LSELVQAVSDPSSPR	LSELVQAVSDPSSPR	2	LSELVQAVSDPSSPR2		2960.3	
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	LSEMDSFNNQLK	LSEMDSFNNQLK	2	LSEMDSFNNQLK2	6361.42	7507.85	6342.51
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	LSENNIQTIFAVTEEFQPVYK	LSENNIQTIFAVTEEFQPVYK	3	LSENNIQTIFAVTEEFQPVYK3	92230	147169	134270
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	LSENSCSLDDLEIGAGHLSSSAFNSEK	LSENSC(UniMod:4)SLDDLEIGAGHLSSSAFNSEK	3	LSENSC(UniMod:4)SLDDLEIGAGHLSSSAFNSEK3	8969.71	9432.31	6586.58
A0A8I6AGG9	A0A8I6AGG9	A0A8I6AGG9_RAT	Chchd3	Coiled-coil-helix-coiled-coil-helix domain containing 3	1	LSENVIDR	LSENVIDR	2	LSENVIDR2	197082	175677	181911
F7FPL2	F7FPL2	F7FPL2_RAT	Smoc2	SPARC related modular calcium binding 2	1	LSEPDPSHTLEER	LSEPDPSHTLEER	3	LSEPDPSHTLEER3	17850.8	20068.7	14125
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	LSEQELEFHR	LSEQELEFHR	2	LSEQELEFHR2	5889.56	3929.7	3185.42
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	LSEQELEFHR	LSEQELEFHR	3	LSEQELEFHR3	81095.7	64696	63817.8
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	LSEQELEFHRR	LSEQELEFHRR	3	LSEQELEFHRR3	83382.3	87591.4	102224
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	LSEQESLLLLMSPSMAFR	LSEQESLLLLMSPSMAFR	3	LSEQESLLLLMSPSMAFR3	4409.51	4467.54	3096.26
O08561	O08561	PI4KB_RAT	Pi4kb	Phosphatidylinositol 4-kinase beta	1	LSEQLAHTPTAFK	LSEQLAHTPTAFK	3	LSEQLAHTPTAFK3	10497	13868.4	8587.38
D3ZYR1	D3ZYR1	FCHO2_RAT	Fcho2	F-BAR domain only protein 2	1	LSEQNPAASYYNVDVLK	LSEQNPAASYYNVDVLK	2	LSEQNPAASYYNVDVLK2	22808.4	28330.5	14021.3
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	LSEQQELQR	LSEQQELQR	2	LSEQQELQR2	2362.58	3355.93	3452.73
A0A8I6AAF1	A0A8I6AAF1	A0A8I6AAF1_RAT	Card19	Caspase recruitment domain family, member 19	1	LSEQQVDR	LSEQQVDR	2	LSEQQVDR2	30803.9	25380	30359.7
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	LSESELK	LSESELK	1	LSESELK1	6710.56	5290.21	6848.58
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	LSESELK	LSESELK	2	LSESELK2	440281	515090	536387
Q4KLJ8	Q4KLJ8	PDCL3_RAT	Pdcl3	Phosducin-like protein 3	1	LSESGAIK	LSESGAIK	2	LSESGAIK2	278989	272162	270012
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	LSESLQPGR	LSESLQPGR	2	LSESLQPGR2	7183.78	6711.8	4571.13
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	LSESNIQPIFAVTK	LSESNIQPIFAVTK	2	LSESNIQPIFAVTK2	196872	181074	204695
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	LSESNIQPIFAVTK	LSESNIQPIFAVTK	3	LSESNIQPIFAVTK3	13064.6	10546.4	12891.7
D3ZT64	D3ZT64	D3ZT64_RAT	Atg2a	Autophagy related 2A	1	LSESPASLPSCLPVETALINQR	LSESPASLPSC(UniMod:4)LPVETALINQR	3	LSESPASLPSC(UniMod:4)LPVETALINQR3	3325.3	2875.32	3896.78
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	LSESVLSPPCFVR	LSESVLSPPC(UniMod:4)FVR	2	LSESVLSPPC(UniMod:4)FVR2	50315.5	50716.9	43283.1
D4A7N1	D4A7N1	MIC25_RAT	Chchd6	MICOS complex subunit Mic25	1	LSESVVNR	LSESVVNR	2	LSESVVNR2	23154.3	27727.7	
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	LSETNLNVELLK	LSETNLNVELLK	2	LSETNLNVELLK2	35866.5	27970.1	33627.1
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	LSETSIK	LSETSIK	2	LSETSIK2	115647	99925.1	109526
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	LSETSIKDR	LSETSIKDR	2	LSETSIKDR2	3268.79	14542.1	7157.01
Q68FU7	Q68FU7	COQ6_RAT	Coq6	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial	1	LSETYSNR	LSETYSNR	2	LSETYSNR2	10065.9	9039.4	9806.4
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	LSEVITDTGVVCHK	LSEVITDTGVVC(UniMod:4)HK	2	LSEVITDTGVVC(UniMod:4)HK2	78208	61404.1	54228
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	LSEVITDTGVVCHK	LSEVITDTGVVC(UniMod:4)HK	3	LSEVITDTGVVC(UniMod:4)HK3	189809	249291	216847
G3V9L1	G3V9L1	G3V9L1_RAT	Tex2	Testis expressed 2	1	LSEVIYEPFQLLSK	LSEVIYEPFQLLSK	2	LSEVIYEPFQLLSK2	14562.4		12172.9
D3ZDR7	D3ZDR7	D3ZDR7_RAT	Themis2	Thymocyte selection associated family member 2	1	LSEVLAR	LSEVLAR	2	LSEVLAR2	17285.1	28597	12876.1
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	LSEVLQAVTDHDIPQQLVER	LSEVLQAVTDHDIPQQLVER	3	LSEVLQAVTDHDIPQQLVER3	23952.8	33942.8	39923.5
F7F4L4	F7F4L4	F7F4L4_RAT	Dnajb12	DnaJ heat shock protein family (Hsp40) member B12	1	LSEVQASLHG	LSEVQASLHG	2	LSEVQASLHG2	9168.89	6506.99	7635.88
B2GV15	B2GV15	B2GV15_RAT	Dbt	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	LSEVVGSGK	LSEVVGSGK	2	LSEVVGSGK2	15918.8	23668.2	24975.4
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	LSEVVTVILK	LSEVVTVILK	2	LSEVVTVILK2	35602	34641.8	25272.7
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	LSEYPNVDELR	LSEYPNVDELR	2	LSEYPNVDELR2	133345	162124	224734
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	LSEYSHHFVSAFVR	LSEYSHHFVSAFVR	3	LSEYSHHFVSAFVR3	16127.7	16914	12259.4
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	LSEYSHHFVSAFVR	LSEYSHHFVSAFVR	4	LSEYSHHFVSAFVR4	11481.4	15858.8	17901.5
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	LSFEAVR	LSFEAVR	2	LSFEAVR2	726694	696425	747243
Q641Z8	Q641Z8	PEF1_RAT	Pef1	Peflin	1	LSFEDFVTMTASR	LSFEDFVTMTASR	2	LSFEDFVTMTASR2	6120.84	7202.78	6335.91
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	LSFEEPR	LSFEEPR	2	LSFEEPR2	23984	44930.9	37271.4
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	LSFFCLAGYATESGK	LSFFC(UniMod:4)LAGYATESGK	2	LSFFC(UniMod:4)LAGYATESGK2	49614.8	50166.1	45304
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	LSFFCLAGYATESGK	LSFFC(UniMod:4)LAGYATESGK	3	LSFFC(UniMod:4)LAGYATESGK3	6129.9	2154.57	2505.7
A0A1W2Q626	A0A1W2Q626	A0A1W2Q626_RAT	Slc39a10	Solute carrier family 39 member 10	1	LSFFGLEK	LSFFGLEK	2	LSFFGLEK2	5144.85	6045.67	8847.13
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	LSFGDAAQTLWAR	LSFGDAAQTLWAR	2	LSFGDAAQTLWAR2	3549.13	2043.44	
F1LU48	F1LU48	F1LU48_RAT	Ergic1	Endoplasmic reticulum-Golgi intermediate compartment protein	1	LSFGDTLQVQNVHGAFNALGGADR	LSFGDTLQVQNVHGAFNALGGADR	3	LSFGDTLQVQNVHGAFNALGGADR3	14821.6	14679.2	22085.6
Q5M9G9	Q5M9G9	FAKD4_RAT	Tbrg4	FAST kinase domain-containing protein 4	1	LSFHQTQVAQR	LSFHQTQVAQR	3	LSFHQTQVAQR3	5.49398e+06	4.28851e+06	5.46685e+06
Q32PY2	Q32PY2	LIPH_RAT	Liph	Lipase member H	1	LSFHSAVVGTGLSVR	LSFHSAVVGTGLSVR	3	LSFHSAVVGTGLSVR3	4215.73	5584.35	
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	LSFISVGNK	LSFISVGNK	2	LSFISVGNK2	76055.1	71036.1	64944.4
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	LSFLTQLR	LSFLTQLR	2	LSFLTQLR2	14051.6	6793.56	12300.1
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	LSFLVGYIANK	LSFLVGYIANK	2	LSFLVGYIANK2	4749.14	8570.48	5873.11
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	LSFLYLITGNLEK	LSFLYLITGNLEK	2	LSFLYLITGNLEK2	49683.4	56792	47101.6
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	LSFLYLITGNLEK	LSFLYLITGNLEK	3	LSFLYLITGNLEK3	4359.07	5392.6	5311
B2GV15	B2GV15	B2GV15_RAT	Dbt	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	LSFMPFFLK	LSFMPFFLK	2	LSFMPFFLK2	3704.85	7990.49	3692.19
Q63257	Q63257	IL4RA_RAT	Il4r	Interleukin-4 receptor subunit alpha	1	LSFPVNTLTSGVR	LSFPVNTLTSGVR	2	LSFPVNTLTSGVR2	20601.4	11754.6	20315.2
Q62632	Q62632	FSTL1_RAT	Fstl1	Follistatin-related protein 1	1	LSFQEFLK	LSFQEFLK	2	LSFQEFLK2	70674.3	56032.9	58685.3
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	LSFQHDPETSVLTLR	LSFQHDPETSVLTLR	2	LSFQHDPETSVLTLR2	85384.6	77049.2	63143.7
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	LSFQHDPETSVLTLR	LSFQHDPETSVLTLR	3	LSFQHDPETSVLTLR3	1.26166e+06	1.40912e+06	1.45485e+06
O88422	O88422	GALT5_RAT	Galnt5	Polypeptide N-acetylgalactosaminyltransferase 5	1	LSFSEINTGILK	LSFSEINTGILK	2	LSFSEINTGILK2	7227.79	5628.93	7610.09
D3ZUC2	D3ZUC2	D3ZUC2_RAT	Mov10	RNA helicase	1	LSFSPSLLSR	LSFSPSLLSR	2	LSFSPSLLSR2	3459.36	4889.35	
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	LSFTESTHVEFK	LSFTESTHVEFK	3	LSFTESTHVEFK3	22255.9	14561.9	14573
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	LSFVNVDSHFR	LSFVNVDSHFR	3	LSFVNVDSHFR3	18349.7	14933.5	12840.6
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	LSFVTPR	LSFVTPR	2	LSFVTPR2	50534.7	73317.3	44170.3
Q62715;Q62716	Q62716;Q62715	DEF1_RAT;DEF2_RAT	Defa	Neutrophil antibiotic peptide NP-2	0	LSGACGYR	LSGAC(UniMod:4)GYR	2	LSGAC(UniMod:4)GYR2	16840.7	19832	16645.1
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	LSGAIGER	LSGAIGER	2	LSGAIGER2	40848.2	49827	68292.5
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	LSGALHVYSFSSD	LSGALHVYSFSSD	2	LSGALHVYSFSSD2	439437	520151	414900
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	LSGALSEDPQFPK	LSGALSEDPQFPK	2	LSGALSEDPQFPK2	91257.5	103842	81889.1
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	LSGAPPPPEGVGGGHCSEISTELIR	LSGAPPPPEGVGGGHC(UniMod:4)SEISTELIR	3	LSGAPPPPEGVGGGHC(UniMod:4)SEISTELIR3	37388.9	26972	31817.5
B0BNJ4	B0BNJ4	B0BNJ4_RAT	Ethe1	ETHE1, persulfide dioxygenase	1	LSGAQADLHIGEGDSIPFGR	LSGAQADLHIGEGDSIPFGR	3	LSGAQADLHIGEGDSIPFGR3	20775.3	16296.7	16534.8
Q9QYH7	Q9QYH7	GHRL_RAT	Ghrl	Appetite-regulating hormone	1	LSGAQYQQHGR	LSGAQYQQHGR	3	LSGAQYQQHGR3			8872.21
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	LSGCSQDCEDLK	LSGC(UniMod:4)SQDC(UniMod:4)EDLK	2	LSGC(UniMod:4)SQDC(UniMod:4)EDLK2	104457	161627	152029
D3ZRH1	D3ZRH1	D3ZRH1_RAT	Oxa1l	OXA1L, mitochondrial inner membrane protein	1	LSGDQAEFYK	LSGDQAEFYK	2	LSGDQAEFYK2	15261.9	19115.5	22290.2
O08774	O08774	RGS12_RAT	Rgs12	Regulator of G-protein signaling 12	1	LSGEKEPLDLGAPISSLDGQR	LSGEKEPLDLGAPISSLDGQR	3	LSGEKEPLDLGAPISSLDGQR3	12204.5	15057.5	7412.12
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	LSGEYEK	LSGEYEK	1	LSGEYEK1	8827.42	6249.46	4781.94
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	LSGEYEK	LSGEYEK	2	LSGEYEK2	1.00163e+06	1.33719e+06	1.32218e+06
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	LSGFLEHER	LSGFLEHER	2	LSGFLEHER2	14220.7	9616.68	7161.63
P30009	P30009	MARCS_RAT	Marcks	Myristoylated alanine-rich C-kinase substrate	1	LSGFSFK	LSGFSFK	2	LSGFSFK2	121559	128909	126154
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	LSGHPNIVQFCSAASIGK	LSGHPNIVQFC(UniMod:4)SAASIGK	3	LSGHPNIVQFC(UniMod:4)SAASIGK3	6488.33	9339.9	6772.17
Q5I0C3	Q5I0C3	MCCA_RAT	Mccc1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	1	LSGHSEFEAGNVHTDFIPQHHK	LSGHSEFEAGNVHTDFIPQHHK	4	LSGHSEFEAGNVHTDFIPQHHK4	6994.83		
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	LSGIAAENMVVTDVYNHR	LSGIAAENMVVTDVYNHR	3	LSGIAAENMVVTDVYNHR3	25378.5	39125.6	38447.8
Q9ER24	Q9ER24	ATX10_RAT	Atxn10	Ataxin-10	1	LSGIMVPAPIQDLEALR	LSGIMVPAPIQDLEALR	2	LSGIMVPAPIQDLEALR2	37084.1	44860.7	51273.7
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	LSGISMDVAVPENTGQDPAR	LSGISMDVAVPENTGQDPAR	3	LSGISMDVAVPENTGQDPAR3	18207.1	28108.8	29775.1
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	LSGLDTLLVVIR	LSGLDTLLVVIR	2	LSGLDTLLVVIR2	5804.74	9660.83	6678.68
A0A8I5ZU41	A0A8I5ZU41	A0A8I5ZU41_RAT	Amy1	Alpha-amylase	1	LSGLLDLALEK	LSGLLDLALEK	2	LSGLLDLALEK2	8735.01	8296.06	9949.43
Q6P752	Q6P752	TOIP2_RAT	Tor1aip2	Torsin-1A-interacting protein 2	1	LSGLWSR	LSGLWSR	2	LSGLWSR2	48992.8	46659.2	49097.8
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	LSGMKTLEAQLTPQVVER	LSGMKTLEAQLTPQVVER	4	LSGMKTLEAQLTPQVVER4	14822	20498.7	27360.5
P53676	P53676	AP3M1_RAT	Ap3m1	AP-3 complex subunit mu-1	1	LSGMPDLSLSFMNPR	LSGMPDLSLSFMNPR	2	LSGMPDLSLSFMNPR2	90633.8	75899.4	87423.6
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	LSGPAELR	LSGPAELR	2	LSGPAELR2	14646.7	13876.5	14653.3
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	LSGPLAVEEALK	LSGPLAVEEALK	2	LSGPLAVEEALK2	13045.9	7988.73	5921.26
Q5XI78	Q5XI78;D3ZQD3	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	0	LSGQDVER	LSGQDVER	2	LSGQDVER2	149099	83510.1	84574.3
P28064	P28064	PSB8_RAT	Psmb8	Proteasome subunit beta type-8	1	LSGQMFSTGSGNTYAYGVMDSGYR	LSGQMFSTGSGNTYAYGVMDSGYR	3	LSGQMFSTGSGNTYAYGVMDSGYR3	102462	121989	110113
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LSGQSAISTQPDAVK	LSGQSAISTQPDAVK	2	LSGQSAISTQPDAVK2	56802	61286.1	61437.4
F1M171	F1M171	F1M171_RAT	Leg1	Similar to RIKEN cDNA 2310057J18	1	LSGSLSLTIWESLMSTK	LSGSLSLTIWESLMSTK	2	LSGSLSLTIWESLMSTK2		1793.98	1717.18
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	LSGSNPYTSVTPQIINSK	LSGSNPYTSVTPQIINSK	2	LSGSNPYTSVTPQIINSK2	408200	442226	417019
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	LSGSNPYTSVTPQIINSK	LSGSNPYTSVTPQIINSK	3	LSGSNPYTSVTPQIINSK3	196342	196815	204074
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	LSGSSLGSFAANR	LSGSSLGSFAANR	2	LSGSSLGSFAANR2	5592.66	5485.2	5906.23
A0A8I6G9X6	A0A8I6G9X6	A0A8I6G9X6_RAT	Kntc1	Kinetochore associated 1	1	LSGTEAVLIAHK	LSGTEAVLIAHK	3	LSGTEAVLIAHK3	1138.1	2021.32	1934.89
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	LSGTNQDGADK	LSGTNQDGADK	2	LSGTNQDGADK2			15675.7
Q66HC1	Q66HC1	TDRD3_RAT	Tdrd3	Tudor domain-containing protein 3	1	LSGTVDIK	LSGTVDIK	2	LSGTVDIK2	4464.08	5302.46	
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	LSGVEDHVK	LSGVEDHVK	2	LSGVEDHVK2	7978.88	12350.4	8539.7
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	LSGVSVSSDAFFPFR	LSGVSVSSDAFFPFR	2	LSGVSVSSDAFFPFR2	19079.9	22526	22017.6
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	LSGWEEEEESWLYSSPK	LSGWEEEEESWLYSSPK	3	LSGWEEEEESWLYSSPK3	7838.33	11420	11618.9
A0A8I5ZS67	A0A8I5ZS67	A0A8I5ZS67_RAT	Gigyf2	GRB10 interacting GYF protein 2	1	LSGWGNVSK	LSGWGNVSK	2	LSGWGNVSK2	104014	85263.9	141237
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	LSGWLAQQEDAHR	LSGWLAQQEDAHR	3	LSGWLAQQEDAHR3	5537.99	4870.81	6380.39
F1MAA4	F1MAA4	F1MAA4_RAT	Atp13a2	ATPase cation transporting 13A2	1	LSGYCGSPWR	LSGYC(UniMod:4)GSPWR	2	LSGYC(UniMod:4)GSPWR2	4348.19	6584.28	4242.78
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	LSGYEEALK	LSGYEEALK	2	LSGYEEALK2	190497	179216	193926
P62944	P52303;P62944	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	LSHANSAVVLSAVK	LSHANSAVVLSAVK	2	LSHANSAVVLSAVK2	3991.64	8110.5	4111.06
P62944	P52303;P62944	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	LSHANSAVVLSAVK	LSHANSAVVLSAVK	3	LSHANSAVVLSAVK3	52941.6	62310.3	49844
Q2LC84	A1L1I3;Q2LC84	NUMB_RAT	Numb	Protein numb homolog	0	LSHAVGCAFAACLER	LSHAVGC(UniMod:4)AFAAC(UniMod:4)LER	3	LSHAVGC(UniMod:4)AFAAC(UniMod:4)LER3	16907.7	4564.04	11736.7
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	LSHDNTGAR	LSHDNTGAR	2	LSHDNTGAR2	1061.75		
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	LSHDWLCYLAPEIVR	LSHDWLC(UniMod:4)YLAPEIVR	2	LSHDWLC(UniMod:4)YLAPEIVR2		3125.36	4104.61
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	LSHDWLCYLAPEIVR	LSHDWLC(UniMod:4)YLAPEIVR	3	LSHDWLC(UniMod:4)YLAPEIVR3	56551.5	61129.8	57348.1
P32198	P32198	CPT1A_RAT	Cpt1a	Carnitine O-palmitoyltransferase 1, liver isoform	1	LSHEALK	LSHEALK	2	LSHEALK2	8694.37		5309.4
A2RRT9	A2RRT9	CP4V2_RAT	Cyp4v2	Cytochrome P450 4V2	1	LSHEDIR	LSHEDIR	2	LSHEDIR2	19338.8	22255.8	31230.9
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	LSHELAETTR	LSHELAETTR	2	LSHELAETTR2	4379.78	1131.96	1449.07
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	LSHELAETTR	LSHELAETTR	3	LSHELAETTR3	9880.82	9619.57	7521.82
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	LSHEYEVIK	LSHEYEVIK	2	LSHEYEVIK2	31645.3	34075.8	20934.5
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	LSHIAEDVGR	LSHIAEDVGR	2	LSHIAEDVGR2	17684.2	9698.74	9780.94
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	LSHLEDR	LSHLEDR	2	LSHLEDR2	6185.27		
D3ZRN5	D3ZRN5	D3ZRN5_RAT	Ro60	Ro60, Y RNA binding protein	1	LSHLKPNSEGLAIVTK	LSHLKPNSEGLAIVTK	4	LSHLKPNSEGLAIVTK4	4488.55	6698.85	8260.95
A0A8I5ZYB9	A0A8I5ZYB9	A0A8I5ZYB9_RAT	Lrrc32	Leucine rich repeat containing 32	1	LSHLPAWTR	LSHLPAWTR	2	LSHLPAWTR2	80118.8	49158.6	58217.8
O70210	O70210	CHAD_RAT	Chad	Chondroadherin	1	LSHNPLK	LSHNPLK	2	LSHNPLK2	24411.4	31303.5	23720.4
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	LSHPGHLMSQPSSACDSLPDSDK	LSHPGHLMSQPSSAC(UniMod:4)DSLPDSDK	4	LSHPGHLMSQPSSAC(UniMod:4)DSLPDSDK4	7731.2	6194.26	2601.8
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	LSHPGHLMSQPSSACDSLPDSDKK	LSHPGHLMSQPSSAC(UniMod:4)DSLPDSDKK	4	LSHPGHLMSQPSSAC(UniMod:4)DSLPDSDKK4	10007.5	10649	10569
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	LSHSTTQAFSPTPK	LSHSTTQAFSPTPK	3	LSHSTTQAFSPTPK3	17038.5	5154.25	17323.5
Q80VJ4	Q80VJ4	GPCP1_RAT	Gpcpd1	Glycerophosphocholine phosphodiesterase GPCPD1	1	LSHVTALK	LSHVTALK	2	LSHVTALK2	7255	7202.92	3948.05
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	LSHWLTLCK	LSHWLTLC(UniMod:4)K	3	LSHWLTLC(UniMod:4)K3	2791.18	1924.01	
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	LSIAEVVR	LSIAEVVR	2	LSIAEVVR2	63341.2	95701.4	74472.1
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	LSIDAIAAQLLR	LSIDAIAAQLLR	2	LSIDAIAAQLLR2	14402.8	20938.5	13784.6
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	LSIDAIAAQLLR	LSIDAIAAQLLR	3	LSIDAIAAQLLR3	2489.14	2663.91	
O54715	O54715	VAS1_RAT	Atp6ap1	V-type proton ATPase subunit S1	1	LSIEDFTAYGGVFGNK	LSIEDFTAYGGVFGNK	2	LSIEDFTAYGGVFGNK2	9937.41	8919.53	9854.35
A0A8I5ZXL6	A0A8I5ZXL6	A0A8I5ZXL6_RAT	Plekha7	Pleckstrin homology domain containing A7	1	LSIFCEQDR	LSIFC(UniMod:4)EQDR	2	LSIFC(UniMod:4)EQDR2	5064.19	6338.88	6883.48
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	LSIFIHK	LSIFIHK	2	LSIFIHK2	7681.01	2642.41	2714.67
A0A8I5ZXB9	A0A8I5ZXB9	A0A8I5ZXB9_RAT	Kifap3	Kinesin-associated protein 3	1	LSIFMENK	LSIFMENK	2	LSIFMENK2	11145.8	8416	8425.62
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	LSIGDGQQHHMGGSK	LSIGDGQQHHMGGSK	2	LSIGDGQQHHMGGSK2	209524	220589	161745
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	LSIGDGQQHHMGGSK	LSIGDGQQHHMGGSK	3	LSIGDGQQHHMGGSK3	267171	189831	182023
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	LSIGDGQQHHMGGSK	LSIGDGQQHHMGGSK	4	LSIGDGQQHHMGGSK4	77636.4	69955.5	59397.1
A0A8I6A9K0	A0A8I6A9K0	A0A8I6A9K0_RAT	ENSRNOG00000069813	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1	1	LSIGINIK	LSIGINIK	2	LSIGINIK2	4584.86	7837.08	5691.45
A0A8I6A502	A0A8I6A502	A0A8I6A502_RAT	Tns3	Tensin 3	1	LSIGQYDNDAGSQVTFSK	LSIGQYDNDAGSQVTFSK	2	LSIGQYDNDAGSQVTFSK2		4800.86	2399.3
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	LSIHMDDELR	LSIHMDDELR	3	LSIHMDDELR3	13055.1	13150.9	14747.1
A0A8I6GLQ4	A0A8I6GLQ4	A0A8I6GLQ4_RAT	Naip5	NLR family, apoptosis inhibitory protein 5	1	LSIHTFTESDLSK	LSIHTFTESDLSK	3	LSIHTFTESDLSK3	4272.88	8167.65	
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	LSIHTSTESDLSK	LSIHTSTESDLSK	3	LSIHTSTESDLSK3	7558.47	13703.5	7312.72
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	LSIIATDHTYR	LSIIATDHTYR	2	LSIIATDHTYR2	1755.56	1516.6	3923.93
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	LSIIATDHTYR	LSIIATDHTYR	3	LSIIATDHTYR3	18535.7	18864.5	20427.1
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	LSIICLNSSR	LSIIC(UniMod:4)LNSSR	2	LSIIC(UniMod:4)LNSSR2	11228.4	6659.8	3653.18
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	LSILSEER	LSILSEER	2	LSILSEER2	974361	908486	871181
Q9Z136	Q9Z136	TSC1_RAT	Tsc1	Hamartin	1	LSILSLLGHVVR	LSILSLLGHVVR	3	LSILSLLGHVVR3	569.237	4040.74	5256.44
O35244	O35244	PRDX6_RAT	Prdx6	Peroxiredoxin-6	1	LSILYPATTGR	LSILYPATTGR	2	LSILYPATTGR2	33803.9	36791.8	35368.5
Q5XI83	Q5XI83	VP35L_RAT	Vps35l	VPS35 endosomal protein-sorting factor-like	1	LSINLFMGSEK	LSINLFMGSEK	2	LSINLFMGSEK2	8026.83	2998.42	5628.66
D3ZED8	D3ZED8	D3ZED8_RAT	Pmel	Premelanosome protein	1	LSIPTGHAR	LSIPTGHAR	2	LSIPTGHAR2	100880	76080.9	99958.4
P17425	P17425	HMCS1_RAT	Hmgcs1	Hydroxymethylglutaryl-CoA synthase, cytoplasmic	1	LSIQCYLSALDR	LSIQC(UniMod:4)YLSALDR	2	LSIQC(UniMod:4)YLSALDR2	4756.43	2519.51	3021.94
A0A8I6AP98	A0A0G2K8S3;A0A8I6AP98	A0A8I6AP98_RAT	Mettl27	Methyltransferase like 27	0	LSIQPLIDH	LSIQPLIDH	2	LSIQPLIDH2	11122.2	7826.46	9940.65
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	LSISALFVTPK	LSISALFVTPK	2	LSISALFVTPK2	52547.2	34438	51814.8
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	LSISEAQCLRPQINR	LSISEAQC(UniMod:4)LRPQINR	3	LSISEAQC(UniMod:4)LRPQINR3	176469	164487	174418
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LSISEQNAQR	LSISEQNAQR	2	LSISEQNAQR2	4.17134e+06	4.91899e+06	4.86877e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LSISEQNAQR	LSISEQNAQR	3	LSISEQNAQR3	9938.61	12987.4	6817.13
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	LSISGTYNLK	LSISGTYNLK	2	LSISGTYNLK2	209809	200826	147447
Q63556	Q63556	SPA3M_RAT	Serpina3m	Serine protease inhibitor A3M (Fragment)	1	LSISTDYSLEEVLPELGIR	LSISTDYSLEEVLPELGIR	3	LSISTDYSLEEVLPELGIR3	26324.2	30814.2	23110.8
A0A8I6GEF9	A0A8I6GEF9	A0A8I6GEF9_RAT	Mrpl58	Mitochondrial ribosomal protein L58	1	LSISYCR	LSISYC(UniMod:4)R	2	LSISYC(UniMod:4)R2	5497.25		
A2RUW1	A2RUW1	TOLIP_RAT	Tollip	Toll-interacting protein	1	LSITVVQAK	LSITVVQAK	2	LSITVVQAK2	66948.9	69933.9	66056.4
P27952	A0A0G2K8H4;A0A0U1RVI9;D3ZT78;P27952;A0A8I5ZSA5	RS2_RAT	Rps2	Small ribosomal subunit protein uS5	0	LSIVPVR	LSIVPVR	2	LSIVPVR2	52125.9	52874	53827.9
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	LSIWAIPSLK	LSIWAIPSLK	2	LSIWAIPSLK2	14864.8	9667.76	8813.06
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	LSIWNIADIADK	LSIWNIADIADK	2	LSIWNIADIADK2	12540.5	9816.27	15061
P30427	P30427	PLEC_RAT	Plec	Plectin	1	LSIYEALR	LSIYEALR	2	LSIYEALR2	3484.29	3451.69	
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	LSKDPNIVIAK	LSKDPNIVIAK	2	LSKDPNIVIAK2	51398	40467	35982.1
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	LSKDPNIVIAK	LSKDPNIVIAK	3	LSKDPNIVIAK3	435675	416144	426922
P34926	P34926;P15205	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	0	LSKPCCYIFPGGR	LSKPC(UniMod:4)C(UniMod:4)YIFPGGR	3	LSKPC(UniMod:4)C(UniMod:4)YIFPGGR3	27109.7	22181.3	21046.8
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	LSLANNK	LSLANNK	1	LSLANNK1	111764	155946	143412
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	LSLAPTDVK	LSLAPTDVK	2	LSLAPTDVK2	19486.1	25111.3	22564.9
Q6MG06	Q6MG06	GNL1_RAT	Gnl1	Guanine nucleotide-binding protein-like 1	1	LSLCFHPPGYSEQR	LSLC(UniMod:4)FHPPGYSEQR	3	LSLC(UniMod:4)FHPPGYSEQR3	8841.39	17272.7	10803.2
P97578	P97578	FEZ2_RAT	Fez2	Fasciculation and elongation protein zeta-2	1	LSLCFRPTSDADPPR	LSLC(UniMod:4)FRPTSDADPPR	3	LSLC(UniMod:4)FRPTSDADPPR3	61103.4	110109	69515.2
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	LSLDDLLQR	LSLDDLLQR	2	LSLDDLLQR2	30226.2	28269.2	36470.7
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	LSLDELHR	LSLDELHR	2	LSLDELHR2	37270.2	18655.6	28062.5
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	LSLDELTK	LSLDELTK	2	LSLDELTK2	37284.2	59929.7	40683
Q00438	Q00438	PTBP1_RAT	Ptbp1	Polypyrimidine tract-binding protein 1	1	LSLDGQNIYNACCTLR	LSLDGQNIYNAC(UniMod:4)C(UniMod:4)TLR	2	LSLDGQNIYNAC(UniMod:4)C(UniMod:4)TLR2		7024.78	11226.8
Q00438	Q00438	PTBP1_RAT	Ptbp1	Polypyrimidine tract-binding protein 1	1	LSLDGQNIYNACCTLR	LSLDGQNIYNAC(UniMod:4)C(UniMod:4)TLR	3	LSLDGQNIYNAC(UniMod:4)C(UniMod:4)TLR3		5558.58	
D4A758	D4A758	D4A758_RAT	Lrrc8b	Leucine rich repeat containing 8 VRAC subunit B	1	LSLDNEGSK	LSLDNEGSK	2	LSLDNEGSK2	12932.6	12134.1	21662.5
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	LSLDSNNLTVLHPTLFHNLSK	LSLDSNNLTVLHPTLFHNLSK	4	LSLDSNNLTVLHPTLFHNLSK4	7631.6	11949.3	12272.7
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	LSLDSYLLKPVQR	LSLDSYLLKPVQR	3	LSLDSYLLKPVQR3	72579	83383.8	67851.4
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	LSLDVCSAHDGSK	LSLDVC(UniMod:4)SAHDGSK	3	LSLDVC(UniMod:4)SAHDGSK3	26176.4	11892.9	5663.62
Q6AY56	Q6AY56	TBA8_RAT	Tuba8	Tubulin alpha-8 chain	1	LSLDYGK	LSLDYGK	1	LSLDYGK1	10751.1	16206.2	10379.6
Q6AY56	Q6AY56	TBA8_RAT	Tuba8	Tubulin alpha-8 chain	1	LSLDYGK	LSLDYGK	2	LSLDYGK2	700000	752519	768945
Q6AY56	Q6AY56	TBA8_RAT	Tuba8	Tubulin alpha-8 chain	1	LSLDYGKK	LSLDYGKK	2	LSLDYGKK2	41934.8	30815.2	23972.3
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	LSLEADR	LSLEADR	2	LSLEADR2	71066	74875.6	66959.4
Q5M887	Q5M887	TPC13_RAT	Trappc13	Trafficking protein particle complex subunit 13	1	LSLEAIPDTVNLEEPFHITCK	LSLEAIPDTVNLEEPFHITC(UniMod:4)K	3	LSLEAIPDTVNLEEPFHITC(UniMod:4)K3	55183.9	46898.3	65217.2
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	LSLEDTFSTMK	LSLEDTFSTMK	2	LSLEDTFSTMK2	299699	351327	305120
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LSLEDTPK	LSLEDTPK	1	LSLEDTPK1	14456.6	16007.2	11941.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LSLEDTPK	LSLEDTPK	2	LSLEDTPK2	4.92116e+06	5.89579e+06	5.66417e+06
P62749	P62749	HPCL1_RAT	Hpcal1	Hippocalcin-like protein 1	1	LSLEEFIK	LSLEEFIK	2	LSLEEFIK2	104529	81213.1	100423
Q07936	Q07936	ANXA2_RAT	Anxa2	Annexin A2	1	LSLEGDHSTPPSAYGSVK	LSLEGDHSTPPSAYGSVK	3	LSLEGDHSTPPSAYGSVK3	8277.1		
P97535	P97535	PLA1A_RAT	Pla1a	Phospholipase A1 member A	1	LSLEISR	LSLEISR	2	LSLEISR2	30707.1	14086	18571.2
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	LSLELLK	LSLELLK	2	LSLELLK2	15770.5	15470.9	14570.8
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	LSLENVVLPSPECLHHAADIWSMCR	LSLENVVLPSPEC(UniMod:4)LHHAADIWSMC(UniMod:4)R	4	LSLENVVLPSPEC(UniMod:4)LHHAADIWSMC(UniMod:4)R4	6256.14	4324.49	
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	LSLEQALPPEPEEENAEPVSK	LSLEQALPPEPEEENAEPVSK	3	LSLEQALPPEPEEENAEPVSK3	38460	67976.1	33690.9
P31325	P31325	PHKG2_RAT	Phkg2	Phosphorylase b kinase gamma catalytic chain, liver/testis isoform	1	LSLEQLEEVR	LSLEQLEEVR	2	LSLEQLEEVR2	6490.63	12496.5	12345.8
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	LSLFGSSK	LSLFGSSK	2	LSLFGSSK2	22590	30379.1	38685.8
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	LSLFSEMVYSK	LSLFSEMVYSK	2	LSLFSEMVYSK2	6171.52	9463.28	
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	LSLGTYASLHGR	LSLGTYASLHGR	2	LSLGTYASLHGR2	9868.95	9256.26	4398.4
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	LSLGTYASLHGR	LSLGTYASLHGR	3	LSLGTYASLHGR3	72949.3	69054.3	82575.8
Q9EPF2	Q9EPF2	MUC18_RAT	Mcam	Cell surface glycoprotein MUC18	1	LSLHGPGATLALSQVTPHDDR	LSLHGPGATLALSQVTPHDDR	3	LSLHGPGATLALSQVTPHDDR3	4476	5526.34	9621.61
Q9EPF2	Q9EPF2	MUC18_RAT	Mcam	Cell surface glycoprotein MUC18	1	LSLHGPGATLALSQVTPHDDR	LSLHGPGATLALSQVTPHDDR	4	LSLHGPGATLALSQVTPHDDR4	39406.6	16939.7	24421.2
Q8K4S7	Q8K4S7	CBLB_RAT	Cblb	E3 ubiquitin-protein ligase CBL-B	1	LSLIFSHMLAEIK	LSLIFSHMLAEIK	2	LSLIFSHMLAEIK2	7383.64	9158.73	
Q8K4S7	Q8K4S7	CBLB_RAT	Cblb	E3 ubiquitin-protein ligase CBL-B	1	LSLIFSHMLAEIK	LSLIFSHMLAEIK	3	LSLIFSHMLAEIK3	31218.8	37423.2	30147.3
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	LSLIFSHMLAELK	LSLIFSHMLAELK	2	LSLIFSHMLAELK2	6021.09		4663.09
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	LSLIFSHMLAELK	LSLIFSHMLAELK	3	LSLIFSHMLAELK3	31218.8	37423.2	30147.3
M0R4Z8	M0R4Z8	M0R4Z8_RAT	Gatd1	Glutamine amidotransferase like class 1 domain containing 1	1	LSLIVEDFVK	LSLIVEDFVK	2	LSLIVEDFVK2	12870.3	16262.6	6569.68
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	LSLLALPPPSPTTQGPR	LSLLALPPPSPTTQGPR	2	LSLLALPPPSPTTQGPR2	18080	5378.34	13252
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	LSLLDSVVGQR	LSLLDSVVGQR	2	LSLLDSVVGQR2	3759.3	6204.98	11034.9
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	LSLLEEDAQSCR	LSLLEEDAQSC(UniMod:4)R	2	LSLLEEDAQSC(UniMod:4)R2	19341.3	20831.6	16156.4
Q3KRE2	Q3KRE2	Q3KRE2_RAT	Mettl7a	Methyltransferase like 7A	1	LSLLEVGCGTGANFK	LSLLEVGC(UniMod:4)GTGANFK	2	LSLLEVGC(UniMod:4)GTGANFK2	24341.4	33252.5	31128.5
Q9JMK8	Q9JMK8	VPS54_RAT	Vps54	Vacuolar protein sorting-associated protein 54	1	LSLLLDNER	LSLLLDNER	2	LSLLLDNER2	3396.46	2680.57	7823.29
A0A8I6AM66	A0A8I6AM66	A0A8I6AM66_RAT	Cdh15	Cadherin 15	1	LSLLLQDSGEPPQQR	LSLLLQDSGEPPQQR	2	LSLLLQDSGEPPQQR2	5583.84		1534.79
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	LSLLLQR	LSLLLQR	2	LSLLLQR2	27010.8	15080.8	11299.3
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	LSLLLQRPDFHGETHTSR	LSLLLQRPDFHGETHTSR	3	LSLLLQRPDFHGETHTSR3	12084.9	12211.9	12141.4
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	LSLLLQRPDFHGETHTSR	LSLLLQRPDFHGETHTSR	4	LSLLLQRPDFHGETHTSR4	67369.9	66555.2	61532
Q5XHZ9	Q5XHZ9	PCH2_RAT	Trip13	Pachytene checkpoint protein 2 homolog	1	LSLLLSEISR	LSLLLSEISR	2	LSLLLSEISR2	7762.68	8759.22	10113.4
G3V8R8	G3V8R8	G3V8R8_RAT	Kcnk6	Potassium channel subfamily K member	1	LSLLLTHAPLSWLSLR	LSLLLTHAPLSWLSLR	3	LSLLLTHAPLSWLSLR3	8217.9	7725.04	11025.2
B1WBN7	B1WBN7	B1WBN7_RAT	Fam20c	FAM20C	1	LSLLMAESLQHDK	LSLLMAESLQHDK	3	LSLLMAESLQHDK3	42335.6	28885.3	32639.6
P32577	P41243;P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	0	LSLMPWFHGK	LSLMPWFHGK	2	LSLMPWFHGK2	29846.6	39566.4	22516.2
P32577	P41243;P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	0	LSLMPWFHGK	LSLMPWFHGK	3	LSLMPWFHGK3	206802	176748	207938
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	LSLNPIYR	LSLNPIYR	2	LSLNPIYR2	297657	324960	289403
Q5FVN1	Q5FVN1	STBD1_RAT	Stbd1	Starch-binding domain-containing protein 1	1	LSLNQGMDESR	LSLNQGMDESR	2	LSLNQGMDESR2	16486.7	18389.5	17897.1
F1M9Q3	F1M9Q3	F1M9Q3_RAT	Ltn1	E3 ubiquitin-protein ligase listerin	1	LSLNYECFK	LSLNYEC(UniMod:4)FK	2	LSLNYEC(UniMod:4)FK2	5846.86	7878.35	13750.7
O35831	O35831	CDK17_RAT	Cdk17	Cyclin-dependent kinase 17	1	LSLPADIR	LSLPADIR	2	LSLPADIR2	25294.6	23193.4	24762.4
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LSLPDFHVPEITIPEFTIPNVNLK	LSLPDFHVPEITIPEFTIPNVNLK	3	LSLPDFHVPEITIPEFTIPNVNLK3	158050	152747	138598
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LSLPDFHVPEITIPEFTIPNVNLK	LSLPDFHVPEITIPEFTIPNVNLK	4	LSLPDFHVPEITIPEFTIPNVNLK4	27829.8	42339.3	18773.8
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	LSLPDNDLTTLPASIANLINLR	LSLPDNDLTTLPASIANLINLR	3	LSLPDNDLTTLPASIANLINLR3	21971.7	2818.15	
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	LSLPDVVDHLYYPCYEK	LSLPDVVDHLYYPC(UniMod:4)YEK	3	LSLPDVVDHLYYPC(UniMod:4)YEK3	4029.05	1499.23	
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	LSLPEIHEGFR	LSLPEIHEGFR	2	LSLPEIHEGFR2	854615	782929	683061
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	LSLPEIHEGFR	LSLPEIHEGFR	3	LSLPEIHEGFR3	5.17905e+06	5.17646e+06	5.31946e+06
D4A1T9	D4A1T9	D4A1T9_RAT	Slc35d2	Solute carrier family 35 member D2	1	LSLPMFTVLR	LSLPMFTVLR	2	LSLPMFTVLR2	5590.13	5221.03	6048.19
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	LSLPTDLKPDLDVK	LSLPTDLKPDLDVK	3	LSLPTDLKPDLDVK3	48828.6	56283.8	39028.8
Q6P6V6	Q6P6V6	GP108_RAT	Gpr108	Protein GPR108	1	LSLQETEDKFPK	LSLQETEDKFPK	3	LSLQETEDKFPK3	59308.4	52493.4	35113.2
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	LSLQFEEDKENSSK	LSLQFEEDKENSSK	3	LSLQFEEDKENSSK3	5342.3	14971.9	12736.7
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	LSLQGHPTDLQTSNVK	LSLQGHPTDLQTSNVK	2	LSLQGHPTDLQTSNVK2	18284.3	17032.3	12170.7
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	LSLQGHPTDLQTSNVK	LSLQGHPTDLQTSNVK	3	LSLQGHPTDLQTSNVK3	227742	345854	331279
P29315	P29315	RINI_RAT	Rnh1	Ribonuclease inhibitor	1	LSLQNCSLTEAGCGVLPDVLR	LSLQNC(UniMod:4)SLTEAGC(UniMod:4)GVLPDVLR	3	LSLQNC(UniMod:4)SLTEAGC(UniMod:4)GVLPDVLR3	18228.4	16364.8	14432
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	LSLQTFQTFK	LSLQTFQTFK	2	LSLQTFQTFK2	6.32049e+06	6.74196e+06	7.69238e+06
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	LSLQTFQTFK	LSLQTFQTFK	3	LSLQTFQTFK3		1668.3	
Q99N02	Q99N02	SO3A1_RAT	Slco3a1	Solute carrier organic anion transporter family member 3A1	1	LSLSALGAIR	LSLSALGAIR	2	LSLSALGAIR2	2369.62	3980.89	
D4A7H9	D4A7H9	D4A7H9_RAT	Chmp7	Charged multivesicular body protein 7	1	LSLSEGGLVPSSK	LSLSEGGLVPSSK	2	LSLSEGGLVPSSK2	17812.5	20186	19270.9
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	LSLSETLFQR	LSLSETLFQR	2	LSLSETLFQR2	37433.6	53887.2	41245.8
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LSLSNAISTVLPLTQLR	LSLSNAISTVLPLTQLR	2	LSLSNAISTVLPLTQLR2	45207.6	33953.9	56746.1
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LSLSNAISTVLPLTQLR	LSLSNAISTVLPLTQLR	3	LSLSNAISTVLPLTQLR3	102504	111225	102910
A0A0G2K6C7	A0A0G2K6C7	A0A0G2K6C7_RAT	Trim5	Tripartite motif-containing 5	1	LSLSNDSHYQPK	LSLSNDSHYQPK	3	LSLSNDSHYQPK3	6616.9		16330.7
P97526	P97526	NF1_RAT	Nf1	Neurofibromin	1	LSLTEFSLPK	LSLTEFSLPK	2	LSLTEFSLPK2		4008.38	
Q9ET64	Q9ET64	NSMA_RAT	Smpd2	Sphingomyelin phosphodiesterase 2	1	LSLTYPDAHYFR	LSLTYPDAHYFR	3	LSLTYPDAHYFR3	57543.3	61444.8	75595.4
Q5M860	Q5M860	Q5M860_RAT	Arhgdib	Rho GDP dissociation inhibitor beta	1	LSLVCDSAPGPITMDLTGDLK	LSLVC(UniMod:4)DSAPGPITMDLTGDLK	3	LSLVC(UniMod:4)DSAPGPITMDLTGDLK3	26638.2	22607.2	15558.1
Q4FZT8	Q4FZT8	SPRY4_RAT	Spryd4	SPRY domain-containing protein 4	1	LSLVDVNR	LSLVDVNR	2	LSLVDVNR2	4823.58	4711.82	10905.2
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	LSLVIGQAGQGK	LSLVIGQAGQGK	2	LSLVIGQAGQGK2	4969.7	6524.71	2992.79
A0A0G2KAU4	A0A0G2KAU4	A0A0G2KAU4_RAT	Rasgrp3	RAS guanyl releasing protein 3	1	LSLVLEPR	LSLVLEPR	2	LSLVLEPR2	26892.2	40468	19945.5
Q5FVM7	Q5FVM7	DJC16_RAT	Dnajc16	DnaJ homolog subfamily C member 16	1	LSLWMER	LSLWMER	2	LSLWMER2	8186.33	16979	12794.3
Q5U303	Q5U303	TAB2_RAT	Tab2	TGF-beta-activated kinase 1 and MAP3K7-binding protein 2	1	LSMGSDDAAYTQALLVHQK	LSMGSDDAAYTQALLVHQK	3	LSMGSDDAAYTQALLVHQK3	2216.6	3051.43	1937.53
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	LSMKPEPLFR	LSMKPEPLFR	3	LSMKPEPLFR3	10099.1	10210.1	9267.65
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	LSMKPLGEGPPDPK	LSMKPLGEGPPDPK	3	LSMKPLGEGPPDPK3	9716.51	12729	8996.6
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	LSMKPLSDGPPDPK	LSMKPLSDGPPDPK	3	LSMKPLSDGPPDPK3	8105.85	4932.4	7011.6
D3ZBX9	D3ZBX9	D3ZBX9_RAT	Ccdc92	Coiled-coil domain containing 92	1	LSMLSGELEQR	LSMLSGELEQR	2	LSMLSGELEQR2	48105.9	33504	46383.3
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	LSMTDDSK	LSMTDDSK	2	LSMTDDSK2	26507.6	31722.7	26384.1
D4A4P4	D4A4P4	D4A4P4_RAT	Flad1	FAD synthase	1	LSMVPSSAR	LSMVPSSAR	2	LSMVPSSAR2	19970.6	22419.2	15010
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	LSMVQVWPVR	LSMVQVWPVR	2	LSMVQVWPVR2	61626.3	61572.8	72319.8
A0A0G2K162	Q9JMB3;Q9WTP0;A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	0	LSMYGVDLHHAK	LSMYGVDLHHAK	3	LSMYGVDLHHAK3	9302.92	11395.4	8286.88
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	LSMYGVDLHK	LSMYGVDLHK	2	LSMYGVDLHK2	42663.1	37706.1	29615.4
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	LSMYGVDLHK	LSMYGVDLHK	3	LSMYGVDLHK3	112706	114956	125034
P33436	P33436	MMP2_RAT	Mmp2	72 kDa type IV collagenase	1	LSNDDIK	LSNDDIK	2	LSNDDIK2	23905.4	18066.1	20232
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	LSNDEIK	LSNDEIK	2	LSNDEIK2	88709.4	113472	96375.6
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	LSNDEIKR	LSNDEIKR	2	LSNDEIKR2	12120.9	29066.6	24907.2
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LSNDMMGSYAEMK	LSNDMMGSYAEMK	2	LSNDMMGSYAEMK2	2.03666e+06	2.1966e+06	2.22076e+06
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	LSNEDILK	LSNEDILK	2	LSNEDILK2	17775	17722.2	17046.7
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LSNGSEWLFHGK	LSNGSEWLFHGK	3	LSNGSEWLFHGK3	9368.33	10206.6	12394.9
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	LSNGVTEILQK	LSNGVTEILQK	2	LSNGVTEILQK2	8636.76	8945.43	5860.14
A0A8I5ZZZ6	A0A8I5ZZZ6	A0A8I5ZZZ6_RAT	Riok3	Serine/threonine-protein kinase RIO3	1	LSNHVFNALK	LSNHVFNALK	2	LSNHVFNALK2	7249.31	9743.86	1782.88
A0A8I5ZZZ6	A0A8I5ZZZ6	A0A8I5ZZZ6_RAT	Riok3	Serine/threonine-protein kinase RIO3	1	LSNHVFNALK	LSNHVFNALK	3	LSNHVFNALK3	72731.9	81259	90079.6
P62703	D3ZX01;P62703	RS4X_RAT	Rps4x	Small ribosomal subunit protein eS4	0	LSNIFVIGK	LSNIFVIGK	2	LSNIFVIGK2	41329.3	37731.9	44302.3
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	LSNLAHVMTLYK	LSNLAHVMTLYK	2	LSNLAHVMTLYK2	6035.11	1364.17	4473.62
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	LSNLAHVMTLYK	LSNLAHVMTLYK	3	LSNLAHVMTLYK3	40806.7	39688.2	33353.6
D4ADF5	D4ADF5	D4ADF5_RAT	Pdcd5	Programmed cell death 5	1	LSNLALVKPEK	LSNLALVKPEK	2	LSNLALVKPEK2	6928.82	5867.18	4876.74
D4ADF5	D4ADF5	D4ADF5_RAT	Pdcd5	Programmed cell death 5	1	LSNLALVKPEK	LSNLALVKPEK	3	LSNLALVKPEK3	87089.1	97077.5	88549
A0A8I6AI88	A0A8I6AI88	A0A8I6AI88_RAT	Chpf2	Hexosyltransferase	1	LSNLEGLGAR	LSNLEGLGAR	2	LSNLEGLGAR2	14379.9	17287.4	17426
Q9Z1S7	Q9Z1S7	OMD_RAT	Omd	Osteomodulin	1	LSNLQQLHLDHNNLEEFPFPLPK	LSNLQQLHLDHNNLEEFPFPLPK	3	LSNLQQLHLDHNNLEEFPFPLPK3	77781.3	75075.3	72519.3
Q9Z1S7	Q9Z1S7	OMD_RAT	Omd	Osteomodulin	1	LSNLQQLHLDHNNLEEFPFPLPK	LSNLQQLHLDHNNLEEFPFPLPK	4	LSNLQQLHLDHNNLEEFPFPLPK4	724388	731115	717376
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	LSNQVSTIVSLLSTLCR	LSNQVSTIVSLLSTLC(UniMod:4)R	2	LSNQVSTIVSLLSTLC(UniMod:4)R2	6232.86	1767.89	
Q9Z1P2	Q9QXQ0;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	LSNRPAFMPSEGR	LSNRPAFMPSEGR	2	LSNRPAFMPSEGR2	152618	134662	110517
Q9Z1P2	Q9QXQ0;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	LSNRPAFMPSEGR	LSNRPAFMPSEGR	3	LSNRPAFMPSEGR3	4.96648e+06	5.26109e+06	5.42982e+06
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	LSNSAMGK	LSNSAMGK	1	LSNSAMGK1	533.852		
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	LSNTLSLDIHENHSLALLGK	LSNTLSLDIHENHSLALLGK	3	LSNTLSLDIHENHSLALLGK3	10976.6	8330.7	8537.94
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	LSNTLSLDIHENHSLALLGK	LSNTLSLDIHENHSLALLGK	4	LSNTLSLDIHENHSLALLGK4	2608.68		
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	LSNTSPEFQEMSLLER	LSNTSPEFQEMSLLER	2	LSNTSPEFQEMSLLER2	315765	337042	334960
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	LSNTSPEFQEMSLLER	LSNTSPEFQEMSLLER	3	LSNTSPEFQEMSLLER3	63143.2	78511	76036.2
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LSNVLQQIEIK	LSNVLQQIEIK	2	LSNVLQQIEIK2	80228.3	87621.1	85113.4
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LSNVLQQIEIKDYYDK	LSNVLQQIEIKDYYDK	3	LSNVLQQIEIKDYYDK3	12123.1		21469.8
O08776	O08776	NDUF3_RAT	Ndufaf3	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3	1	LSPADDELYQR	LSPADDELYQR	2	LSPADDELYQR2	15627.6	9271.36	17849.8
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	LSPAFHQALLSFCR	LSPAFHQALLSFC(UniMod:4)R	3	LSPAFHQALLSFC(UniMod:4)R3	49518	64061.1	62666.5
A0A8I5ZVT2	A0A8I5ZVT2	A0A8I5ZVT2_RAT	Fndc3a	Fibronectin type III domain containing 3a	1	LSPAMGCK	LSPAMGC(UniMod:4)K	2	LSPAMGC(UniMod:4)K2	11275.8	11296.8	13291.1
B2RYI0	B2RYI0	WDR91_RAT	Wdr91	WD repeat-containing protein 91	1	LSPAQGPPQAQSSAK	LSPAQGPPQAQSSAK	2	LSPAQGPPQAQSSAK2	21896.5	27137.3	42677.5
Q6AY97	Q6AY97	CCD91_RAT	Ccdc91	Coiled-coil domain-containing protein 91	1	LSPASPELILDHDR	LSPASPELILDHDR	3	LSPASPELILDHDR3	5381.77	19063.3	7210.25
Q66HC5	Q66HC5	NUP93_RAT	Nup93	Nuclear pore complex protein Nup93	1	LSPATENK	LSPATENK	2	LSPATENK2	11283.9		16105.6
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	LSPDAIPGK	LSPDAIPGK	2	LSPDAIPGK2	49555.1	40580.9	53026.7
Q06000	Q06000	LIPL_RAT	Lpl	Lipoprotein lipase	1	LSPDDADFVDVLHTFTR	LSPDDADFVDVLHTFTR	2	LSPDDADFVDVLHTFTR2	15887.8	7455.32	21988.6
Q06000	Q06000	LIPL_RAT	Lpl	Lipoprotein lipase	1	LSPDDADFVDVLHTFTR	LSPDDADFVDVLHTFTR	3	LSPDDADFVDVLHTFTR3	47195.3	51843.2	64693.1
P07867	P07867	LIPC_RAT	Lipc	Hepatic triacylglycerol lipase	1	LSPDDANFVDAIHTFTR	LSPDDANFVDAIHTFTR	2	LSPDDANFVDAIHTFTR2	21313.7	20179.7	12991.1
P07867	P07867	LIPC_RAT	Lipc	Hepatic triacylglycerol lipase	1	LSPDDANFVDAIHTFTR	LSPDDANFVDAIHTFTR	3	LSPDDANFVDAIHTFTR3	52551	56108.6	56995.2
A0A8I5ZM01	A0A8I5ZM01	A0A8I5ZM01_RAT	Evi5	Ecotropic viral integration site 5	1	LSPDDLELLAK	LSPDDLELLAK	2	LSPDDLELLAK2	16205.3	13192.2	
Q9ES54	Q9ES54	NPL4_RAT	Nploc4	Nuclear protein localization protein 4 homolog	1	LSPDGHFGSK	LSPDGHFGSK	2	LSPDGHFGSK2	13896.8	20773.5	17498.9
P05982	P05982	NQO1_RAT	Nqo1	NAD(P)H dehydrogenase [quinone] 1	1	LSPDIVAEQK	LSPDIVAEQK	2	LSPDIVAEQK2		4907.51	2532.79
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	LSPDMDTCEDILPCVPFSMAK	LSPDMDTC(UniMod:4)EDILPC(UniMod:4)VPFSMAK	3	LSPDMDTC(UniMod:4)EDILPC(UniMod:4)VPFSMAK3	60712.8	73378.6	71892.1
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	LSPDQCR	LSPDQC(UniMod:4)R	2	LSPDQC(UniMod:4)R2	213670	243199	259093
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	LSPEDKETMEK	LSPEDKETMEK	2	LSPEDKETMEK2	28035	21820	21807.2
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	LSPEDKETMEK	LSPEDKETMEK	3	LSPEDKETMEK3	201739	176784	167546
Q63598	A0A0G2QC04;Q63598;Q5XI38	PLST_RAT	Pls3	Plastin-3	0	LSPEELLLR	LSPEELLLR	2	LSPEELLLR2	54548.7	48396.6	57386.5
D3ZZV1	D3ZZV1	D3ZZV1_RAT	Pam16	Presequence translocase associated motor 16	1	LSPEEVQK	LSPEEVQK	2	LSPEEVQK2	66575.5	91546.8	69513.1
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	LSPENEPDLK	LSPENEPDLK	2	LSPENEPDLK2	64197.5	54289.5	33061.5
Q925S8	Q925S8	YMEL1_RAT	Yme1l1	ATP-dependent zinc metalloprotease YME1L1	1	LSPETQSAIEQEIR	LSPETQSAIEQEIR	2	LSPETQSAIEQEIR2	4392.77	5692.53	
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	LSPFMADIR	LSPFMADIR	2	LSPFMADIR2	5.16033e+06	5.70581e+06	6.59702e+06
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	LSPFNITHR	LSPFNITHR	2	LSPFNITHR2	11068.7	15503.3	17689.9
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	LSPGFPMK	LSPGFPMK	2	LSPGFPMK2	237716	240260	242427
A0A8I6A2H6	A0A8I6A2H6	A0A8I6A2H6_RAT	Micu3	Mitochondrial calcium uptake family, member 3	1	LSPHLVNTVFK	LSPHLVNTVFK	3	LSPHLVNTVFK3	4291.18		3539.85
Q8K4K5	Q8K4K5	L2GL1_RAT	Llgl1	Lethal(2) giant larvae protein homolog 1	1	LSPHTGPLPWPAGFQPR	LSPHTGPLPWPAGFQPR	3	LSPHTGPLPWPAGFQPR3	5117.32	4020.45	6742.88
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	LSPIYNLIPLTMK	LSPIYNLIPLTMK	2	LSPIYNLIPLTMK2	2.29185e+06	1.81865e+06	1.60954e+06
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	LSPIYNLIPLTMK	LSPIYNLIPLTMK	3	LSPIYNLIPLTMK3	313756	164511	228383
P18265	P18265	GSK3A_RAT	Gsk3a	Glycogen synthase kinase-3 alpha	1	LSPLEACAHSFFDELR	LSPLEAC(UniMod:4)AHSFFDELR	3	LSPLEAC(UniMod:4)AHSFFDELR3		3886.98	
A0A8I6GK77	A0A8I6GK77	A0A8I6GK77_RAT	Bcas3	BCAS3, microtubule associated cell migration factor	1	LSPLPSLMVVTPLAQIK	LSPLPSLMVVTPLAQIK	2	LSPLPSLMVVTPLAQIK2	4452.26		
O88277	O88277	FAT2_RAT	Fat2	Protocadherin Fat 2	1	LSPLSPEPVYR	LSPLSPEPVYR	2	LSPLSPEPVYR2	7478.51	13359.8	9063.04
A0A8I6ASC6	A0A8I6ASC6	A0A8I6ASC6_RAT	Igdcc4	Immunoglobulin superfamily, DCC subclass, member 4	1	LSPLTPSTVR	LSPLTPSTVR	2	LSPLTPSTVR2	4485.08	4212.93	2427.26
P58751	P58751	RELN_RAT	Reln	Reelin	1	LSPLWYK	LSPLWYK	1	LSPLWYK1	7314.27	6951.4	5639.3
P58751	P58751	RELN_RAT	Reln	Reelin	1	LSPLWYK	LSPLWYK	2	LSPLWYK2	656353	791681	734003
D4A264	D4A264	D4A264_RAT	Ptgr3	Zinc binding alcohol dehydrogenase, domain containing 2	1	LSPNFHEAVTLR	LSPNFHEAVTLR	3	LSPNFHEAVTLR3	27545.9	16478.8	28255.2
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	LSPNQQR	LSPNQQR	2	LSPNQQR2			1.3956e+06
D4AEK4	D4AEK4	D4AEK4_RAT	Tceanc	Transcription elongation factor A N-terminal and central domain containing	1	LSPQDAAK	LSPQDAAK	1	LSPQDAAK1	10165.2	15605.8	6856.37
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LSPQELTALR	LSPQELTALR	2	LSPQELTALR2	148785	215682	168052
Q62818	Q62818	EI2BB_RAT	Eif2b2	Translation initiation factor eIF-2B subunit beta	1	LSPQFPSEEDSFHK	LSPQFPSEEDSFHK	3	LSPQFPSEEDSFHK3	17554.6	8774.75	17058.3
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	LSPQSIYNLLPQK	LSPQSIYNLLPQK	2	LSPQSIYNLLPQK2	4.9826e+06	4.28245e+06	4.03975e+06
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	LSPQSIYNLLPQK	LSPQSIYNLLPQK	3	LSPQSIYNLLPQK3	2.63366e+06	2.60315e+06	2.59845e+06
D3ZYI0	D3ZYI0	D3ZYI0_RAT	Gca	Grancalcin	1	LSPQTLAAIVR	LSPQTLAAIVR	2	LSPQTLAAIVR2	169487	165733	164993
A0A8I5Y9M9	A0A8I5Y9M9	A0A8I5Y9M9_RAT	Sri	Sorcin	1	LSPQTVNSVAK	LSPQTVNSVAK	2	LSPQTVNSVAK2	397165	407660	440130
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	LSPRPTAAELEEVLQVNSLIQTQK	LSPRPTAAELEEVLQVNSLIQTQK	3	LSPRPTAAELEEVLQVNSLIQTQK3	28836.8	28686.5	29546.6
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	LSPRPTAAELEEVLQVNSLIQTQK	LSPRPTAAELEEVLQVNSLIQTQK	4	LSPRPTAAELEEVLQVNSLIQTQK4	18592	15828.6	20185.2
D3ZU48	D3ZU48	D3ZU48_RAT	Klhdc4	Kelch domain containing 4	1	LSPSGPGPTPR	LSPSGPGPTPR	2	LSPSGPGPTPR2	27436.3	22246.4	26696.5
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	LSPSPTSQR	LSPSPTSQR	2	LSPSPTSQR2	73184.3	59571.9	73665.2
F1M2D4	F1M2D4	F1M2D4_RAT	Arhgap23	Rho GTPase activating protein 23	1	LSPSTAPDERPAADTR	LSPSTAPDERPAADTR	3	LSPSTAPDERPAADTR3	2982.56	4856.49	
D3ZSM9	D3ZSM9	D3ZSM9_RAT	Brat1	BRCA1-associated ATM activator 1	1	LSPTQAGPLALGTLK	LSPTQAGPLALGTLK	2	LSPTQAGPLALGTLK2	12405.5	8410.77	9881.8
Q99P99	Q99P99	HDAC4_RAT	Hdac4	Histone deacetylase 4	1	LSPTVGHSLIEAQK	LSPTVGHSLIEAQK	3	LSPTVGHSLIEAQK3	9181.38		12546
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	LSPTVILDTHGSNVNSGR	LSPTVILDTHGSNVNSGR	2	LSPTVILDTHGSNVNSGR2	29199.3	24462.5	25256.5
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	LSPTVILDTHGSNVNSGR	LSPTVILDTHGSNVNSGR	3	LSPTVILDTHGSNVNSGR3	2.50126e+06	2.32893e+06	2.47569e+06
Q5BK49	Q5BK49	TACT_RAT	Cd96	T-cell surface protein tactile	1	LSPVQIQDDGR	LSPVQIQDDGR	2	LSPVQIQDDGR2	14667.1	28775.7	32399.8
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	LSPWIHPDSK	LSPWIHPDSK	2	LSPWIHPDSK2	4863.21	4609.79	
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	LSPWIHPDSK	LSPWIHPDSK	3	LSPWIHPDSK3	81300.4	101314	78884.6
G3V9M3	G3V9M3	G3V9M3_RAT	Wdr47	WD repeat domain 47	1	LSPYPSSPMR	LSPYPSSPMR	2	LSPYPSSPMR2	10597.7	11350.5	14257.5
Q05695	Q05695	L1CAM_RAT	L1cam	Neural cell adhesion molecule L1	1	LSPYVHYTFR	LSPYVHYTFR	2	LSPYVHYTFR2	7254.07	5938.15	8307.76
Q05695	Q05695	L1CAM_RAT	L1cam	Neural cell adhesion molecule L1	1	LSPYVHYTFR	LSPYVHYTFR	3	LSPYVHYTFR3	26488.7	36667.5	29097.2
Q6F596	Q6F596	GGPPS_RAT	Ggps1	Geranylgeranyl pyrophosphate synthase	1	LSQAFNHWLK	LSQAFNHWLK	3	LSQAFNHWLK3	13700.7	7469.54	7354.35
D4AAT7	D4AAT7	NNRD_RAT	Naxd	ATP-dependent (S)-NAD(P)H-hydrate dehydratase	1	LSQALGNITIVQK	LSQALGNITIVQK	2	LSQALGNITIVQK2	4629.6	5989.11	5122.51
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	LSQALQVR	LSQALQVR	2	LSQALQVR2	57068.4	68528.3	67528.1
Q9Z136	Q9Z136	TSC1_RAT	Tsc1	Hamartin	1	LSQAPLLPSLLK	LSQAPLLPSLLK	2	LSQAPLLPSLLK2	9608.91	7986.22	8651.79
P17475	A0A8I5ZRU6;P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	0	LSQAVHK	LSQAVHK	1	LSQAVHK1			17176.7
P17475	A0A8I5ZRU6;P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	0	LSQAVHK	LSQAVHK	2	LSQAVHK2			835543
A0A8I6GM11	A0A8I6GM11	A0A8I6GM11_RAT	Lsm12	LSM12 homolog	1	LSQAYAISAGVSLEGQQLFQTIHK	LSQAYAISAGVSLEGQQLFQTIHK	3	LSQAYAISAGVSLEGQQLFQTIHK3	4026.64	4893.62	7255.57
A0A8I5Y868	A0A8I5Y868	A0A8I5Y868_RAT	Klc2	Kinesin light chain	1	LSQDEIVLGTK	LSQDEIVLGTK	2	LSQDEIVLGTK2	5675.57	8206.84	
A0A8I5ZKD4	A0A8I5ZKD4	A0A8I5ZKD4_RAT	Nhlrc3	NHL repeat containing 3	1	LSQDFMILWLR	LSQDFMILWLR	2	LSQDFMILWLR2	10909.2	4922.48	1868.2
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	LSQDINK	LSQDINK	1	LSQDINK1		9175.39	
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	LSQDINK	LSQDINK	2	LSQDINK2	29078.2	25303.8	
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	LSQDINKNEER	LSQDINKNEER	2	LSQDINKNEER2	4325.2	6909.63	7783.1
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	LSQDINKNEER	LSQDINKNEER	3	LSQDINKNEER3	87154	86537.3	95255.1
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	LSQDINKNEERR	LSQDINKNEERR	3	LSQDINKNEERR3			19115.9
B1WC12	B1WC12	B1WC12_RAT	Mfsd5	Molybdate-anion transporter	1	LSQDYFVLLVGR	LSQDYFVLLVGR	2	LSQDYFVLLVGR2	2906.69		3896.59
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	LSQECEK	LSQEC(UniMod:4)EK	1	LSQEC(UniMod:4)EK1			25982.4
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	LSQECEK	LSQEC(UniMod:4)EK	2	LSQEC(UniMod:4)EK2			89234.9
Q9WTT7	Q9WTT7	5MP1_RAT	Bzw2	eIF5-mimic protein 1	1	LSQECPIK	LSQEC(UniMod:4)PIK	2	LSQEC(UniMod:4)PIK2	16357.5	27043.7	10908.3
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LSQEEAVPADLSALESHR	LSQEEAVPADLSALESHR	2	LSQEEAVPADLSALESHR2	3545.76	5712.8	4889.71
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LSQEEAVPADLSALESHR	LSQEEAVPADLSALESHR	3	LSQEEAVPADLSALESHR3	89414.8	95531.9	96435.1
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	LSQEEILGSTR	LSQEEILGSTR	2	LSQEEILGSTR2	44622.6	49715.3	33929.5
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	LSQEEYER	LSQEEYER	2	LSQEEYER2	14620.7	13830.2	8715.75
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	LSQELDFVSHNVR	LSQELDFVSHNVR	2	LSQELDFVSHNVR2	3761.63	7020.94	5670.8
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	LSQELDFVSHNVR	LSQELDFVSHNVR	3	LSQELDFVSHNVR3	49636.5	46872.6	59875.3
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	LSQELDLVSHK	LSQELDLVSHK	2	LSQELDLVSHK2	19695.2	15505.5	11468.2
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	LSQELDLVSHK	LSQELDLVSHK	3	LSQELDLVSHK3	96761.3	111262	92043.7
F1MA46	F1MA46	F1MA46_RAT	Pcdh12	Protocadherin 12	1	LSQEPGVEER	LSQEPGVEER	2	LSQEPGVEER2	204144	229080	221641
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	LSQESPQVLLNQFPCENLLTVK	LSQESPQVLLNQFPC(UniMod:4)ENLLTVK	3	LSQESPQVLLNQFPC(UniMod:4)ENLLTVK3	9446.84	12842.5	23392.2
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	LSQETEALGR	LSQETEALGR	2	LSQETEALGR2	84810.6	92716	83717.2
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	LSQEVVLDVGCPYVR	LSQEVVLDVGC(UniMod:4)PYVR	2	LSQEVVLDVGC(UniMod:4)PYVR2	9675.61	11785.1	9188.55
D3ZQ30	D3ZQ30	D3ZQ30_RAT	Telo2	Telomere length regulation protein TEL2 homolog	1	LSQHSSPASGTSR	LSQHSSPASGTSR	2	LSQHSSPASGTSR2			3875.75
P09117	P09117	ALDOC_RAT	Aldoc	Fructose-bisphosphate aldolase C	1	LSQIGVENTEENRR	LSQIGVENTEENRR	3	LSQIGVENTEENRR3	16318.8	18268.6	11898
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	LSQISEDVIR	LSQISEDVIR	2	LSQISEDVIR2	27650.4	31257.6	20399.8
A0A8I6AAQ5	A0A8I6AAQ5	A0A8I6AAQ5_RAT	Gask1a	Golgi associated kinase 1A	1	LSQLCSQGLCGLIK	LSQLC(UniMod:4)SQGLC(UniMod:4)GLIK	2	LSQLC(UniMod:4)SQGLC(UniMod:4)GLIK2	2560.55	4392.33	4638.77
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	LSQLEGVNVER	LSQLEGVNVER	2	LSQLEGVNVER2	74361.2	65059.1	59736
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LSQLETYAIQFDQYIR	LSQLETYAIQFDQYIR	3	LSQLETYAIQFDQYIR3	18552.6	28576.6	34617.3
A0A0U1RRU5	A0A0U1RRU5	A0A0U1RRU5_RAT	Tab1	TGF-beta activated kinase 1/MAP3K7 binding protein 1	1	LSQLGLDAGK	LSQLGLDAGK	2	LSQLGLDAGK2	24346.3	18709.4	23523
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	LSQLNFQK	LSQLNFQK	1	LSQLNFQK1	30683.8	32203.1	33363.6
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	LSQLNFQK	LSQLNFQK	2	LSQLNFQK2	1.98151e+06	2.20053e+06	2.09684e+06
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	LSQLPPEEYVVVVK	LSQLPPEEYVVVVK	2	LSQLPPEEYVVVVK2	51120.4	60368.2	31819
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	LSQLQESHLEAHR	LSQLQESHLEAHR	3	LSQLQESHLEAHR3	14452.8		5012.84
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	LSQLQESHLEAHR	LSQLQESHLEAHR	4	LSQLQESHLEAHR4	9390.51	5140.55	4608.17
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	LSQLQPLPQTLQAWAR	LSQLQPLPQTLQAWAR	2	LSQLQPLPQTLQAWAR2	61220	70113.4	48901.9
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	LSQLQPLPQTLQAWAR	LSQLQPLPQTLQAWAR	3	LSQLQPLPQTLQAWAR3	46400	51251.8	45163.1
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	LSQLSVSDVTTSSLR	LSQLSVSDVTTSSLR	2	LSQLSVSDVTTSSLR2	311354	408288	337276
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	LSQLSVSDVTTSSLR	LSQLSVSDVTTSSLR	3	LSQLSVSDVTTSSLR3	7725.19	5043.43	3501.93
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	LSQLTSLLSSIEDK	LSQLTSLLSSIEDK	2	LSQLTSLLSSIEDK2	28402.9	24355.8	39825.8
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	LSQLTSLLSSIEDKVK	LSQLTSLLSSIEDKVK	3	LSQLTSLLSSIEDKVK3	2249.63		3926.61
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	LSQMATILNLER	LSQMATILNLER	2	LSQMATILNLER2	13217.6	13933.2	13880.4
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	LSQMAVQGLQQFK	LSQMAVQGLQQFK	2	LSQMAVQGLQQFK2	11000.8	8650.79	
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	LSQMILDK	LSQMILDK	1	LSQMILDK1	1882.53		
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	LSQMILDK	LSQMILDK	2	LSQMILDK2	75841.7	83810.9	79057.5
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	LSQMILDKK	LSQMILDKK	2	LSQMILDKK2	5011.93		
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	LSQNACILESVSER	LSQNAC(UniMod:4)ILESVSER	2	LSQNAC(UniMod:4)ILESVSER2	39069	50387.2	46488.3
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	LSQNACILESVSER	LSQNAC(UniMod:4)ILESVSER	3	LSQNAC(UniMod:4)ILESVSER3		6889.43	5729.51
Q9EQP5	Q9EQP5	PRELP_RAT	Prelp	Prolargin	1	LSQNLISR	LSQNLISR	2	LSQNLISR2	7602.6	4887.03	5657.57
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	LSQPATLSK	LSQPATLSK	1	LSQPATLSK1	165645	140593	152011
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	LSQPATLSK	LSQPATLSK	2	LSQPATLSK2	1.2547e+07	1.24437e+07	1.28747e+07
P05545	A0A0G2JSK1;P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	0	LSQPEDQAEINTGSALFIDK	LSQPEDQAEINTGSALFIDK	3	LSQPEDQAEINTGSALFIDK3	136363	136063	136721
P05544	P05544	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	1	LSQPEDQVEINTGSALFIDK	LSQPEDQVEINTGSALFIDK	3	LSQPEDQVEINTGSALFIDK3	69575.9	52320.8	72455.4
Q63556	Q63556	SPA3M_RAT	Serpina3m	Serine protease inhibitor A3M (Fragment)	1	LSQPGDQVK	LSQPGDQVK	1	LSQPGDQVK1	9959.17	4755.21	6107.05
Q63556	Q63556	SPA3M_RAT	Serpina3m	Serine protease inhibitor A3M (Fragment)	1	LSQPGDQVK	LSQPGDQVK	2	LSQPGDQVK2	746250	633896	765688
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	LSQPKPQ	LSQPKPQ	2	LSQPKPQ2	19103.6	17216.9	
D3ZT64	D3ZT64	D3ZT64_RAT	Atg2a	Autophagy related 2A	1	LSQPLFELR	LSQPLFELR	2	LSQPLFELR2	7516.79	18608	
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	LSQPRDEIQISTGNALFIEK	LSQPRDEIQISTGNALFIEK	3	LSQPRDEIQISTGNALFIEK3	5544.82	7856.28	5752.66
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	LSQQAEELRDQHEK	LSQQAEELRDQHEK	3	LSQQAEELRDQHEK3	2617.4	6095.32	
P57790	P57790	KEAP1_RAT	Keap1	Kelch-like ECH-associated protein 1	1	LSQQLCDVTLQVK	LSQQLC(UniMod:4)DVTLQVK	2	LSQQLC(UniMod:4)DVTLQVK2		1744.65	
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	LSQQLDGR	LSQQLDGR	2	LSQQLDGR2	19791	22565.6	20472.4
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	LSQQVTQLGR	LSQQVTQLGR	2	LSQQVTQLGR2	4577.15	2608.3	2498.89
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LSQQYSTTVK	LSQQYSTTVK	2	LSQQYSTTVK2	36816.6	32676.3	43236.7
A0A8I6AJP4	A0A8I6AJP4;P62024	A0A8I6AJP4_RAT	Phactr4	Phosphatase and actin regulator 4	0	LSQRPTAEELEQR	LSQRPTAEELEQR	3	LSQRPTAEELEQR3	20633.8	22474.7	24203.8
P62025	P62025	PHAR2_RAT	Phactr2	Phosphatase and actin regulator 2	1	LSQRPTTEELEQR	LSQRPTTEELEQR	3	LSQRPTTEELEQR3	24386	23258.2	8886.57
A0A8I6AJP4	A0A8I6AJP4	A0A8I6AJP4_RAT	Phactr4	Phosphatase and actin regulator 4	1	LSQRPTVAELLAR	LSQRPTVAELLAR	3	LSQRPTVAELLAR3	12081.7	13344.6	9468.09
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	LSQSEENISGMTSFR	LSQSEENISGMTSFR	2	LSQSEENISGMTSFR2	8927.21	10632.9	11795
A0A8I5ZKH1	A0A8I5ZKH1	A0A8I5ZKH1_RAT	Ythdc2	RNA helicase	1	LSQSLGLVSK	LSQSLGLVSK	2	LSQSLGLVSK2	1397.75	1472.03	
Q5BJS0	Q5BJS0	DHX30_RAT	Dhx30	ATP-dependent RNA helicase DHX30	1	LSQSLLELWR	LSQSLLELWR	2	LSQSLLELWR2		5395.83	
F1M9C9	F1M9C9	F1M9C9_RAT	Hars2	histidine--tRNA ligase	1	LSQSQLALQGLGDLK	LSQSQLALQGLGDLK	2	LSQSQLALQGLGDLK2	1358.62	1947.93	
F1M943	F1M943	F1M943_RAT	Armc8	Armadillo repeat-containing protein 8	1	LSQSTDSNLCDK	LSQSTDSNLC(UniMod:4)DK	2	LSQSTDSNLC(UniMod:4)DK2	5028.95		10268.3
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	LSQTEDR	LSQTEDR	2	LSQTEDR2			38744.8
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	LSQTLQVQLER	LSQTLQVQLER	2	LSQTLQVQLER2	10244.3	14890	17096
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	LSQTPESLDFLK	LSQTPESLDFLK	2	LSQTPESLDFLK2	67419.9	59019.5	65001.4
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	LSQTPESLDFLKVPDQGAAGVR	LSQTPESLDFLKVPDQGAAGVR	3	LSQTPESLDFLKVPDQGAAGVR3	9339.85	10656.3	16387
P48450	P48450	LSS_RAT	Lss	Lanosterol synthase	1	LSQVPDNNPDYQK	LSQVPDNNPDYQK	2	LSQVPDNNPDYQK2	19257.5	22576.5	21499.9
A0A8I5ZQZ1	A0A8I5ZQZ1	A0A8I5ZQZ1_RAT	Nufip2	Nuclear FMR1 interacting protein 2	1	LSQVPMSALK	LSQVPMSALK	2	LSQVPMSALK2	13418.4	10630.3	17089.9
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	LSQYPSENLHDAITK	LSQYPSENLHDAITK	3	LSQYPSENLHDAITK3	15969	18849	10517.9
P14882	P14882	PCCA_RAT	Pcca	Propionyl-CoA carboxylase alpha chain, mitochondrial	1	LSQYQEPIHLPGVR	LSQYQEPIHLPGVR	3	LSQYQEPIHLPGVR3	8934.36	14020.4	5130.34
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	LSRGEAEDMLMR	LSRGEAEDMLMR	3	LSRGEAEDMLMR3	1596.65	3848.54	2826
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	LSRPATITDNVIPACLPSPNYVVADR	LSRPATITDNVIPAC(UniMod:4)LPSPNYVVADR	3	LSRPATITDNVIPAC(UniMod:4)LPSPNYVVADR3	1.33185e+06	1.22443e+06	1.32312e+06
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	LSRPATITDNVIPACLPSPNYVVADR	LSRPATITDNVIPAC(UniMod:4)LPSPNYVVADR	4	LSRPATITDNVIPAC(UniMod:4)LPSPNYVVADR4	44554.4	30062.3	34293.2
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	LSRPFQSIIHAK	LSRPFQSIIHAK	2	LSRPFQSIIHAK2	5717.08	4665.04	1483.74
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	LSRPFQSIIHAK	LSRPFQSIIHAK	3	LSRPFQSIIHAK3	125837	128370	125967
A0A0G2K4E8	A0A0G2K4E8	A0A0G2K4E8_RAT	R3hdm2	R3H domain containing 2	1	LSRPGMTLGAPEVCNQVTSPQSVR	LSRPGMTLGAPEVC(UniMod:4)NQVTSPQSVR	3	LSRPGMTLGAPEVC(UniMod:4)NQVTSPQSVR3	2920.04	6078	3570.09
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	LSRPHIVELLTR	LSRPHIVELLTR	3	LSRPHIVELLTR3	103031	242076	204604
Q63486	Q63486	RRAGA_RAT	Rraga	Ras-related GTP-binding protein A	1	LSRPLECACFR	LSRPLEC(UniMod:4)AC(UniMod:4)FR	3	LSRPLEC(UniMod:4)AC(UniMod:4)FR3	71226.8	60952.1	52706.7
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	LSRPNIFILNNR	LSRPNIFILNNR	3	LSRPNIFILNNR3	21531	23132.6	30067.4
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LSSAETYSR	LSSAETYSR	2	LSSAETYSR2	348454	398013	355469
O88989	O88989	MDHC_RAT	Mdh1	Malate dehydrogenase, cytoplasmic	1	LSSAMSAAK	LSSAMSAAK	2	LSSAMSAAK2	102534	101673	123043
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	LSSASVLGVR	LSSASVLGVR	2	LSSASVLGVR2	46469.1	51005.8	37842.3
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	LSSAYSLSASEQDK	LSSAYSLSASEQDK	2	LSSAYSLSASEQDK2	40931.9	41680	42473.5
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	LSSCAYNIR	LSSC(UniMod:4)AYNIR	2	LSSC(UniMod:4)AYNIR2	823259	962015	925408
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	LSSCDMCELAR	LSSC(UniMod:4)DMC(UniMod:4)ELAR	2	LSSC(UniMod:4)DMC(UniMod:4)ELAR2	57596.1	74719	74313.5
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	LSSCDVLTSAIK	LSSC(UniMod:4)DVLTSAIK	2	LSSC(UniMod:4)DVLTSAIK2	39400.4	25206	33952.2
Q5XIB4	Q5XIB4	UFSP2_RAT	Ufsp2	Ufm1-specific protease 2	1	LSSDALVFR	LSSDALVFR	2	LSSDALVFR2	13919.6	11841.6	13165.2
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	LSSDCEDQIR	LSSDC(UniMod:4)EDQIR	2	LSSDC(UniMod:4)EDQIR2	46582	45201.1	45155.3
D3ZYB4	D3ZYB4	D3ZYB4_RAT	Lpin2	phosphatidate phosphatase	1	LSSDQIAK	LSSDQIAK	2	LSSDQIAK2	24652.9	29541.7	26719.7
Q5FVL8	Q5FVL8	Q5FVL8_RAT	Abcb10	ATP binding cassette subfamily B member 10	1	LSSDTALLGHSVTENLSDGLR	LSSDTALLGHSVTENLSDGLR	3	LSSDTALLGHSVTENLSDGLR3	6098.41	11435.7	5581.43
A0A8I6AD67	A0A8I6AD67	A0A8I6AD67_RAT	Parp9	Poly [ADP-ribose] polymerase	1	LSSDYQVVQVTK	LSSDYQVVQVTK	2	LSSDYQVVQVTK2	1094.1	1325.64	1124.44
Q80W96	Q80W96	ISCA1_RAT	Isca1	Iron-sulfur cluster assembly 1 homolog, mitochondrial	1	LSSEFVFNNPNIK	LSSEFVFNNPNIK	2	LSSEFVFNNPNIK2	7939.7	3898.99	6239.34
P70615	P70615	LMNB1_RAT	Lmnb1	Lamin-B1	1	LSSEMNTSTVNSAR	LSSEMNTSTVNSAR	2	LSSEMNTSTVNSAR2	2621.4	3285.49	3630.15
Q6AYU2	Q6AYU2	Q6AYU2_RAT	Pcbp2	Poly(rC) binding protein 2	1	LSSETGGMGSS	LSSETGGMGSS	2	LSSETGGMGSS2	1698.61	3746.62	
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	LSSFATSVAEDQSVASLTAPQTEETGK	LSSFATSVAEDQSVASLTAPQTEETGK	3	LSSFATSVAEDQSVASLTAPQTEETGK3	7416.47		6387.87
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	LSSFESMTDVK	LSSFESMTDVK	2	LSSFESMTDVK2	5632.68		8634.93
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	LSSFIGAIAIGDLVK	LSSFIGAIAIGDLVK	2	LSSFIGAIAIGDLVK2	23232.4	29696.6	18908.6
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	LSSFIGAIAIGDLVK	LSSFIGAIAIGDLVK	3	LSSFIGAIAIGDLVK3	12803.7	8686.78	8917.42
P11661	P11661	NU5M_RAT	Mtnd5	NADH-ubiquinone oxidoreductase chain 5	1	LSSFSTSLGYYPPIMHR	LSSFSTSLGYYPPIMHR	2	LSSFSTSLGYYPPIMHR2	3254.14	3146.2	2960.48
P11661	P11661	NU5M_RAT	Mtnd5	NADH-ubiquinone oxidoreductase chain 5	1	LSSFSTSLGYYPPIMHR	LSSFSTSLGYYPPIMHR	3	LSSFSTSLGYYPPIMHR3	100288	126563	109631
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	LSSGAAPPEK	LSSGAAPPEK	2	LSSGAAPPEK2	83018.7	85220.8	80385
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	LSSGEHIAAFCLTEPASGSDAASIQTR	LSSGEHIAAFC(UniMod:4)LTEPASGSDAASIQTR	3	LSSGEHIAAFC(UniMod:4)LTEPASGSDAASIQTR3	41826.3	38301	37397.8
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	LSSGILGAIGLGR	LSSGILGAIGLGR	2	LSSGILGAIGLGR2	21651.3	28442.7	15304
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LSSGNDFVLLR	LSSGNDFVLLR	2	LSSGNDFVLLR2	314095	332973	268797
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LSSGNDFVLLR	LSSGNDFVLLR	3	LSSGNDFVLLR3	249560	293654	249065
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	LSSGNDFVLLRLEVPLEDVR	LSSGNDFVLLRLEVPLEDVR	3	LSSGNDFVLLRLEVPLEDVR3	16732.1	12874.7	4345.12
P08649	P08649	CO4_RAT	C4	Complement C4	1	LSSGNDFVLLRLEVPLKDVR	LSSGNDFVLLRLEVPLKDVR	3	LSSGNDFVLLRLEVPLKDVR3	55339.3	27416.3	34729.2
P08649	P08649	CO4_RAT	C4	Complement C4	1	LSSGNDFVLLRLEVPLKDVR	LSSGNDFVLLRLEVPLKDVR	4	LSSGNDFVLLRLEVPLKDVR4	66030.8	66839.3	47899.1
F1LTE0	F1LTE0	TANC2_RAT	Tanc2	Protein TANC2	1	LSSHLKTLSQGSYLYLK	LSSHLKTLSQGSYLYLK	4	LSSHLKTLSQGSYLYLK4	1386.01	3633.37	
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	LSSHPVLSK	LSSHPVLSK	2	LSSHPVLSK2	11013.5	5152.37	9748.23
Q6AXV4	Q6AXV4	SAM50_RAT	Samm50	Sorting and assembly machinery component 50 homolog	1	LSSIADR	LSSIADR	2	LSSIADR2	128156	139236	146906
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	LSSIGIQVDCIQPVPK	LSSIGIQVDC(UniMod:4)IQPVPK	2	LSSIGIQVDC(UniMod:4)IQPVPK2	32279.7	32145.7	21772.9
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	LSSIIDCTGTASYHGFLPVLVR	LSSIIDC(UniMod:4)TGTASYHGFLPVLVR	3	LSSIIDC(UniMod:4)TGTASYHGFLPVLVR3	15304	15833	12378.8
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	LSSIQCICHVIK	LSSIQC(UniMod:4)IC(UniMod:4)HVIK	3	LSSIQC(UniMod:4)IC(UniMod:4)HVIK3	8721.46	6979.99	4199.51
A0A8I6ACK9	A0A8I6A0D0;A0A8I6ACK9;Q498U1;A0A8I5ZW97	A0A8I6ACK9_RAT	Abcg3l3	ATP-binding cassette, subfamily G (WHITE), member 3-like 3	0	LSSISGIMGPGLNAIMGPQDGSR	LSSISGIMGPGLNAIMGPQDGSR	3	LSSISGIMGPGLNAIMGPQDGSR3	29575.6	35324.9	27375.9
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	LSSLFPFAMHQR	LSSLFPFAMHQR	3	LSSLFPFAMHQR3	40502.3	46261.6	46341.3
D3ZF45	D3ZF45	D3ZF45_RAT	Larp4b	La ribonucleoprotein 4B	1	LSSLIIGSSK	LSSLIIGSSK	2	LSSLIIGSSK2	2124.99	3240.47	5601.58
P29457	P29457	SERPH_RAT	Serpinh1	Serpin H1	1	LSSLIILMPHHVEPLER	LSSLIILMPHHVEPLER	4	LSSLIILMPHHVEPLER4	4099.68		
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	LSSLNIIPDSGVEPPPKPPR	LSSLNIIPDSGVEPPPKPPR	3	LSSLNIIPDSGVEPPPKPPR3	15113.7	29296.3	32680.4
A0A0G2K543	A0A0G2K543	A0A0G2K543_RAT	C2cd5	C2 calcium-dependent domain containing 5	1	LSSLNLTNQALNK	LSSLNLTNQALNK	2	LSSLNLTNQALNK2	2215.09	4659.8	6670.71
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	LSSLNQDTNLAEDNQK	LSSLNQDTNLAEDNQK	2	LSSLNQDTNLAEDNQK2	4060.9	3729	3777.12
P61972	P61972;A0A8I6ABF4	NTF2_RAT	Nutf2	Nuclear transport factor 2	0	LSSLPFQK	LSSLPFQK	2	LSSLPFQK2	27730.5	33571.2	21077.9
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	LSSLVTQHDAK	LSSLVTQHDAK	2	LSSLVTQHDAK2			4307.86
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	LSSLVTQHDAK	LSSLVTQHDAK	3	LSSLVTQHDAK3	9527.41	8092.82	
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	LSSMAMISGLSGR	LSSMAMISGLSGR	2	LSSMAMISGLSGR2	116579		
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	LSSMAMISGLSGR	LSSMAMISGLSGR	3	LSSMAMISGLSGR3	5432.27	6622.57	7053.6
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	LSSMNPAFVMPFLR	LSSMNPAFVMPFLR	2	LSSMNPAFVMPFLR2	7601.95	6554.48	8347.74
Q9R0D6	Q9R0D6	TCO2_RAT	Tcn2	Transcobalamin-2	1	LSSMQAGTK	LSSMQAGTK	2	LSSMQAGTK2	5967.54	9835.84	7694
D3ZHQ1	D3ZHQ1	D3ZHQ1_RAT	Dpp8	Dipeptidylpeptidase 8	1	LSSPDDDPVHK	LSSPDDDPVHK	2	LSSPDDDPVHK2	7101.58	4800.82	6092.01
D3ZHQ1	D3ZHQ1	D3ZHQ1_RAT	Dpp8	Dipeptidylpeptidase 8	1	LSSPDDDPVHK	LSSPDDDPVHK	3	LSSPDDDPVHK3	25779.9	24566	21734.3
Q08850	Q08850	STX4_RAT	Stx4	Syntaxin-4	1	LSSPDDEFFQK	LSSPDDEFFQK	2	LSSPDDEFFQK2	100827	78101.4	99015
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	LSSPVPTQR	LSSPVPTQR	2	LSSPVPTQR2	23778.4	23851.8	36092.3
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	LSSQEPCSATCTTGVMSAYAMCVR	LSSQEPC(UniMod:4)SATC(UniMod:4)TTGVMSAYAMC(UniMod:4)VR	3	LSSQEPC(UniMod:4)SATC(UniMod:4)TTGVMSAYAMC(UniMod:4)VR3	2990.08	5201.6	4605.79
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	LSSQLILLQAWTSHLWK	LSSQLILLQAWTSHLWK	3	LSSQLILLQAWTSHLWK3	4859.15	1955.03	1479.85
Q9Z1W6	Q9Z1W6	LYRIC_RAT	Mtdh	Protein LYRIC	1	LSSQLSAGEEK	LSSQLSAGEEK	2	LSSQLSAGEEK2	44123	42994.7	55339.5
A0A8I6AJP4	A0A8I6AJP4	A0A8I6AJP4_RAT	Phactr4	Phosphatase and actin regulator 4	1	LSSRPSEPETSLSSWPCK	LSSRPSEPETSLSSWPC(UniMod:4)K	3	LSSRPSEPETSLSSWPC(UniMod:4)K3	5509.75		4295.69
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	LSSSAEVEDLLQSLVLVSLCSR	LSSSAEVEDLLQSLVLVSLC(UniMod:4)SR	3	LSSSAEVEDLLQSLVLVSLC(UniMod:4)SR3		2757.81	
Q642B4	Q642B4	Q642B4_RAT	Clec14a	C-type lectin domain containing 14A	1	LSSSALDFSPPGTEVSAMCPR	LSSSALDFSPPGTEVSAMC(UniMod:4)PR	3	LSSSALDFSPPGTEVSAMC(UniMod:4)PR3	25346	18264.1	25333.1
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	LSSSGSNCSSSSEGEPAALHAGICVR	LSSSGSNC(UniMod:4)SSSSEGEPAALHAGIC(UniMod:4)VR	3	LSSSGSNC(UniMod:4)SSSSEGEPAALHAGIC(UniMod:4)VR3	7334.72	5732.54	3433.48
P62483	P62483	KCAB2_RAT	Kcnab2	Voltage-gated potassium channel subunit beta-2	1	LSSSIVHEIDSILGNKPYSK	LSSSIVHEIDSILGNKPYSK	3	LSSSIVHEIDSILGNKPYSK3	8028.21	6137.1	5794.26
P62483	P62483	KCAB2_RAT	Kcnab2	Voltage-gated potassium channel subunit beta-2	1	LSSSIVHEIDSILGNKPYSK	LSSSIVHEIDSILGNKPYSK	4	LSSSIVHEIDSILGNKPYSK4	21867.7	11441.8	11055.6
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	LSSSLDNK	LSSSLDNK	2	LSSSLDNK2	127655	118684	137062
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	LSSSLDNKEK	LSSSLDNKEK	2	LSSSLDNKEK2	13942.2	11444	11543.8
D4A7D3	D4A7D3	D4A7D3_RAT	Tbk1	TANK-binding kinase 1	1	LSSSQGTIESSLQDINSR	LSSSQGTIESSLQDINSR	2	LSSSQGTIESSLQDINSR2	3044.79		
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	LSSSSLGTPSASVPASR	LSSSSLGTPSASVPASR	2	LSSSSLGTPSASVPASR2	33025.8	38282.8	34204.3
D3ZRC4	D3ZRC4	PLPL8_RAT	Pnpla8	Calcium-independent phospholipase A2-gamma	1	LSSSTQLPEALPVSTK	LSSSTQLPEALPVSTK	2	LSSSTQLPEALPVSTK2	16886.9	14981	10941.9
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	LSSSVSAMR	LSSSVSAMR	2	LSSSVSAMR2	42574.1	62085.1	54835.2
A0A096MJ11	A0A096MJ11	A0A096MJ11_RAT	Gsdmd	Gasdermin D	1	LSSSWFWKPR	LSSSWFWKPR	2	LSSSWFWKPR2	4709.23	4682.25	
A0A096MJ11	A0A096MJ11	A0A096MJ11_RAT	Gsdmd	Gasdermin D	1	LSSSWFWKPR	LSSSWFWKPR	3	LSSSWFWKPR3	110638	77293.6	82629.6
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	LSSTGLICIDSLK	LSSTGLIC(UniMod:4)IDSLK	2	LSSTGLIC(UniMod:4)IDSLK2	8132.46	7962.3	8973.18
A0A8I5ZSD3	A0A8I5ZSD3	A0A8I5ZSD3_RAT	Or1e25	Olfactory receptor	1	LSSTQGIR	LSSTQGIR	2	LSSTQGIR2	89525.5	57233.4	26014.6
Q811U3	Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	1	LSSTQQSLAEK	LSSTQQSLAEK	2	LSSTQQSLAEK2	4889.98	5564.27	1993.55
Q9EQS0	Q9EQS0	TALDO_RAT	Taldo1	Transaldolase	1	LSSTWEGIQAGK	LSSTWEGIQAGK	2	LSSTWEGIQAGK2	2948.08	3802.63	
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	LSSVDSVLK	LSSVDSVLK	2	LSSVDSVLK2	97211.7	86162.4	72266.3
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	LSSVNLESAVPYPTDR	LSSVNLESAVPYPTDR	2	LSSVNLESAVPYPTDR2	5372.75	9996.41	6265.29
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	LSSVSSHDSGFISQDAFQSK	LSSVSSHDSGFISQDAFQSK	3	LSSVSSHDSGFISQDAFQSK3	64841.1	56029.8	84469.7
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	LSSYEEMLQSVK	LSSYEEMLQSVK	2	LSSYEEMLQSVK2	14974.8	15532.3	8755.54
P58751	P58751	RELN_RAT	Reln	Reelin	1	LSSYHNFYSIR	LSSYHNFYSIR	2	LSSYHNFYSIR2	12062.9	20279.2	17995.4
P58751	P58751	RELN_RAT	Reln	Reelin	1	LSSYHNFYSIR	LSSYHNFYSIR	3	LSSYHNFYSIR3	333778	430199	362986
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	LSSYLSQTK	LSSYLSQTK	2	LSSYLSQTK2	3.40046e+06	2.5167e+06	2.7342e+06
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	LSSYLSQTKK	LSSYLSQTKK	2	LSSYLSQTKK2	19452.1	18502.7	14478
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	LSSYLSQTKK	LSSYLSQTKK	3	LSSYLSQTKK3	196533	181347	194253
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	LSTACPGR	LSTAC(UniMod:4)PGR	2	LSTAC(UniMod:4)PGR2	27684.5	28659.7	20040.2
Q5PPI8	Q5PPI8	Q5PPI8_RAT	Rmc1	Regulator of MON1-CCZ1	1	LSTANDEIVEVLLSK	LSTANDEIVEVLLSK	2	LSTANDEIVEVLLSK2	5047.48		5997.16
P38718	P38718	MPC2_RAT	Mpc2	Mitochondrial pyruvate carrier 2	1	LSTAQSTVLMATGFIWSR	LSTAQSTVLMATGFIWSR	3	LSTAQSTVLMATGFIWSR3	8326.53	2212.86	4259.11
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	LSTCLLSAPSGIQR	LSTC(UniMod:4)LLSAPSGIQR	2	LSTC(UniMod:4)LLSAPSGIQR2	10802.3	5375.25	9560.88
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	LSTDGSPTR	LSTDGSPTR	2	LSTDGSPTR2	6212.98	333523	351216
P82808	P82808	GFPT1_RAT	Gfpt1	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1	1	LSTDHIPILYR	LSTDHIPILYR	3	LSTDHIPILYR3	4499.37	2215.6	7799.44
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	LSTEDCLIPLFSDALR	LSTEDC(UniMod:4)LIPLFSDALR	2	LSTEDC(UniMod:4)LIPLFSDALR2	3781.54	10599.5	10100.2
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	LSTEPSPDFSNYSEIAK	LSTEPSPDFSNYSEIAK	2	LSTEPSPDFSNYSEIAK2	45235.3	46023.9	50084
Q6AY61	Q6AY61	PRS23_RAT	Prss23	Serine protease 23	1	LSTGCTGTLVAEK	LSTGC(UniMod:4)TGTLVAEK	2	LSTGC(UniMod:4)TGTLVAEK2	5142.96	4506.24	3179.13
D3ZBM7	D3ZBM7	HACE1_RAT	Hace1	E3 ubiquitin-protein ligase HACE1	1	LSTGPGESKPDVLAGK	LSTGPGESKPDVLAGK	3	LSTGPGESKPDVLAGK3		20881.7	
Q9ERE6	Q9ERE6	MPRIP_RAT	Mprip	Myosin phosphatase Rho-interacting protein	1	LSTHELTSLLEK	LSTHELTSLLEK	3	LSTHELTSLLEK3	16976.9	2609.21	8267.46
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	LSTHLRK	LSTHLRK	2	LSTHLRK2			1.01067e+06
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	LSTHSPFR	LSTHSPFR	2	LSTHSPFR2	15650.8	12413.9	23660.9
Q4QQT4	Q4QQT4;Q5XI34	2AAB_RAT	Ppp2r1b	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	0	LSTIALALGVER	LSTIALALGVER	2	LSTIALALGVER2	209515	222935	180580
Q4QQT4	Q4QQT4;Q5XI34	2AAB_RAT	Ppp2r1b	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	0	LSTIALALGVER	LSTIALALGVER	3	LSTIALALGVER3	10207.7	5820.25	5583.57
D4A0J7	D4A0J7	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	1	LSTIIDMLEGAFYGLDLLK	LSTIIDMLEGAFYGLDLLK	3	LSTIIDMLEGAFYGLDLLK3		3795.16	3533.47
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	LSTLCPSAVLQR	LSTLC(UniMod:4)PSAVLQR	2	LSTLC(UniMod:4)PSAVLQR2	75451.3	74219.3	73045.2
A0A0G2JZC4	A0A0G2JZC4	A0A0G2JZC4_RAT	Sema6d	Semaphorin 6D	1	LSTLEYDGEEISGLAR	LSTLEYDGEEISGLAR	2	LSTLEYDGEEISGLAR2	3640.2	3524.53	5032.24
Q5XIU9	Q5XIU9	PGRC2_RAT	Pgrmc2	Membrane-associated progesterone receptor component 2	1	LSTLGSGGER	LSTLGSGGER	2	LSTLGSGGER2	195814	194424	197389
P01015	P01015	ANGT_RAT	Agt	Angiotensinogen	1	LSTLLGAEANLGK	LSTLLGAEANLGK	2	LSTLLGAEANLGK2	127498	118821	127659
D3ZY16	D3ZY16	D3ZY16_RAT	Trim65	Tripartite motif-containing 65	1	LSTLLQGLPAAIQR	LSTLLQGLPAAIQR	2	LSTLLQGLPAAIQR2	9834.71	4717.57	17495.1
Q5RJR8	Q5RJR8	LRC59_RAT	Lrrc59	Leucine-rich repeat-containing protein 59	1	LSTLPSDFCGLTHLVK	LSTLPSDFC(UniMod:4)GLTHLVK	3	LSTLPSDFC(UniMod:4)GLTHLVK3	277965	241327	300247
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	LSTLSDQVNQR	LSTLSDQVNQR	2	LSTLSDQVNQR2	18207.2	23521.2	12927.3
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	LSTMETGTGLIR	LSTMETGTGLIR	2	LSTMETGTGLIR2	56827.2	53037.4	63237.8
Q9Z142	Q9Z142	TMM33_RAT	Tmem33	Transmembrane protein 33	1	LSTNQQNILK	LSTNQQNILK	2	LSTNQQNILK2	32281.1	22462.9	31895.6
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	LSTPLVAVGNAK	LSTPLVAVGNAK	2	LSTPLVAVGNAK2	43328.9	55468.4	48376.3
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	LSTPPPLAEEEGLASR	LSTPPPLAEEEGLASR	2	LSTPPPLAEEEGLASR2	16606.7	7771.44	
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	LSTPSYEEKPLSAVFATK	LSTPSYEEKPLSAVFATK	3	LSTPSYEEKPLSAVFATK3	22670	23513.6	33708.6
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	LSTQGQVDEK	LSTQGQVDEK	2	LSTQGQVDEK2	6702.36	9769.75	7024.66
Q3SWT5	Q3SWT5	S41A3_RAT	Slc41a3	Solute carrier family 41 member 3	1	LSTSANTGQIDDR	LSTSANTGQIDDR	2	LSTSANTGQIDDR2	2767.16	4262.1	5236.17
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	LSTSFSITQNMFCAGYDAK	LSTSFSITQNMFC(UniMod:4)AGYDAK	3	LSTSFSITQNMFC(UniMod:4)AGYDAK3	1.02088e+06	1.10504e+06	1.20341e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LSTSPFALNLTMLPK	LSTSPFALNLTMLPK	2	LSTSPFALNLTMLPK2	22177.8		14954
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	LSTSQDAACK	LSTSQDAAC(UniMod:4)K	2	LSTSQDAAC(UniMod:4)K2	67477		62835.3
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	LSTSSYSQVR	LSTSSYSQVR	2	LSTSSYSQVR2	10367.4	10018.2	5882.86
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	LSTTECVDDSGESHGSNTK	LSTTEC(UniMod:4)VDDSGESHGSNTK	3	LSTTEC(UniMod:4)VDDSGESHGSNTK3	20967.9	18000.6	24347.6
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	LSTVASTDILATVLEEMPPFPER	LSTVASTDILATVLEEMPPFPER	3	LSTVASTDILATVLEEMPPFPER3		9183.03	17839.4
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	LSTVLVR	LSTVLVR	2	LSTVLVR2	64217.8	88065.5	89338.8
Q704E8	Q704E8	ABCB7_RAT	Abcb7	Iron-sulfur clusters transporter ABCB7, mitochondrial	1	LSTVVDADEIIVLSQGK	LSTVVDADEIIVLSQGK	2	LSTVVDADEIIVLSQGK2	2806.57	2017.48	673.648
O70595	O70595	ABCB6_RAT	Abcb6	ATP-binding cassette sub-family B member 6	1	LSTVVNADQILVIK	LSTVVNADQILVIK	2	LSTVVNADQILVIK2	6130.87	7859.69	4584.96
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	LSTYFGK	LSTYFGK	2	LSTYFGK2	14458.7	27468.6	25883.4
F1LRI5	F1LRI5	F1LRI5_RAT	Gcn1	GCN1 activator of EIF2AK4	1	LSVADSQAEAK	LSVADSQAEAK	2	LSVADSQAEAK2	4273.27	1975.1	3845.54
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	LSVAGNCR	LSVAGNC(UniMod:4)R	2	LSVAGNC(UniMod:4)R2	100897	107744	111290
P0C1S9	P0C1S9	DGLB_RAT	Daglb	Diacylglycerol lipase-beta	1	LSVANMEDLK	LSVANMEDLK	2	LSVANMEDLK2	35426.4	39665.2	43966.6
P0C1S9	P0C1S9	DGLB_RAT	Daglb	Diacylglycerol lipase-beta	1	LSVANMEDLKR	LSVANMEDLKR	3	LSVANMEDLKR3	71267.8	88942.9	67853.7
B0BMY6	B0BMY6	B0BMY6_RAT	Otulin	ubiquitinyl hydrolase 1	1	LSVAPEMDIMDYCK	LSVAPEMDIMDYC(UniMod:4)K	2	LSVAPEMDIMDYC(UniMod:4)K2		8434.03	
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	LSVASSDSR	LSVASSDSR	2	LSVASSDSR2	268964	303606	310911
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	LSVAVDGGR	LSVAVDGGR	2	LSVAVDGGR2	6817.02	3883.53	13321.3
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	LSVCTPDK	LSVC(UniMod:4)TPDK	2	LSVC(UniMod:4)TPDK2	34802.8	41386.9	48977.4
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	LSVCTPDKGKEDSSAPVMK	LSVC(UniMod:4)TPDKGKEDSSAPVMK	4	LSVC(UniMod:4)TPDKGKEDSSAPVMK4	10962.3	19325.8	14955
Q63470	A0A8I5ZP97;Q63470	DYR1A_RAT	Dyrk1a	Dual specificity tyrosine-phosphorylation-regulated kinase 1A	0	LSVDLIK	LSVDLIK	2	LSVDLIK2	33264.7	22195.7	35592.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LSVDQFVR	LSVDQFVR	1	LSVDQFVR1	20763.7		28544.6
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LSVDQFVR	LSVDQFVR	2	LSVDQFVR2	3.08724e+06	3.30176e+06	3.3492e+06
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	LSVDTDSWMR	LSVDTDSWMR	2	LSVDTDSWMR2	131763	157847	97882.2
Q5XIF6	A0A8I6AF82;P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	LSVDYGK	LSVDYGK	1	LSVDYGK1	518854	573265	600295
Q5XIF6	A0A8I6AF82;P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	LSVDYGK	LSVDYGK	2	LSVDYGK2	24533.7	28493.1	24796.2
Q5XIF6	A0A8I6AF82;P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	LSVDYGKK	LSVDYGKK	1	LSVDYGKK1	15728.3	26823.4	26969.4
Q5XIF6	A0A8I6AF82;P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	LSVDYGKK	LSVDYGKK	2	LSVDYGKK2	2.30818e+06	2.48724e+06	2.42633e+06
Q568Z6	Q568Z6	IST1_RAT	Ist1	IST1 homolog	1	LSVEAPPK	LSVEAPPK	2	LSVEAPPK2	28057.2	25241.5	27857.1
B1H264	B1H264	B1H264_RAT	Tbc1d17	TBC1 domain family, member 17	1	LSVEDVLTR	LSVEDVLTR	2	LSVEDVLTR2	17207.9	21644.1	16612.7
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	LSVEEFFMDLHNFR	LSVEEFFMDLHNFR	2	LSVEEFFMDLHNFR2	6747.39		6029.73
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	LSVEEFFMDLHNFR	LSVEEFFMDLHNFR	3	LSVEEFFMDLHNFR3	53593.1	21833.3	38347.7
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	LSVEGFAVDK	LSVEGFAVDK	2	LSVEGFAVDK2	26664.8	26885.7	21649.5
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	LSVEILLDR	LSVEILLDR	2	LSVEILLDR2	3354.65	3052.13	
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	LSVEIWDWDR	LSVEIWDWDR	2	LSVEIWDWDR2	94973.5	117080	122662
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	LSVELEASDSQK	LSVELEASDSQK	2	LSVELEASDSQK2	4293.01		2540.01
P53987	P53987	MOT1_RAT	Slc16a1	Monocarboxylate transporter 1	1	LSVFQTVNK	LSVFQTVNK	2	LSVFQTVNK2	134149	142426	115385
B0BNF8	B0BNF8	B0BNF8_RAT	Htatip2	HIV-1 Tat interactive protein 2	1	LSVFRPGVLLCDR	LSVFRPGVLLC(UniMod:4)DR	3	LSVFRPGVLLC(UniMod:4)DR3	37954	29162.1	26253.2
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	LSVFSAVDSPVAPSDK	LSVFSAVDSPVAPSDK	2	LSVFSAVDSPVAPSDK2	18515	19654.4	15015.2
Q99P63	Q99P63	MICU2_RAT	Micu2	Calcium uptake protein 2, mitochondrial	1	LSVGESISLDEFK	LSVGESISLDEFK	2	LSVGESISLDEFK2	19068.9	12589.1	21797.4
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	LSVGNQQVR	LSVGNQQVR	2	LSVGNQQVR2	10070.6	10434.4	13197
Q5FWS5	Q5FWS5	Q5FWS5_RAT	Loxl1	Lysyl oxidase homolog	1	LSVGSVYRPNQNGR	LSVGSVYRPNQNGR	3	LSVGSVYRPNQNGR3	28920.3	40077.2	53907.2
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	LSVHTHLK	LSVHTHLK	2	LSVHTHLK2	2250.92	6270.76	4612.69
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	LSVIGSIR	LSVIGSIR	2	LSVIGSIR2	127137	133741	122535
Q63691	Q63691	CD14_RAT	Cd14	Monocyte differentiation antigen CD14	1	LSVLDLSYNR	LSVLDLSYNR	2	LSVLDLSYNR2	29092.1	10489.4	13100.4
A0A0G2K012	A0A0G2K012	A0A0G2K012_RAT	Ubxn6	UBX domain protein 6	1	LSVLFQFVR	LSVLFQFVR	2	LSVLFQFVR2	3851.86	4427.67	1894.41
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	LSVLGAITSVQQR	LSVLGAITSVQQR	2	LSVLGAITSVQQR2	166049	174333	166079
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	LSVLGAITSVQQR	LSVLGAITSVQQR	3	LSVLGAITSVQQR3	70494.2	79174.2	69246.5
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	LSVLGEGR	LSVLGEGR	2	LSVLGEGR2	90669.7	85090.1	82182
Q4KLZ6	Q4KLZ6	TKFC_RAT	Tkfc	Triokinase/FMN cyclase	1	LSVLLLEK	LSVLLLEK	2	LSVLLLEK2	7148.02	11081.9	6249.16
Q765A7	Q765A7	PGAP1_RAT	Pgap1	GPI inositol-deacylase	1	LSVLNHHFIR	LSVLNHHFIR	3	LSVLNHHFIR3	4903.73	4597.9	
A0A8I5ZZ05	A0A8I5ZZ05	A0A8I5ZZ05_RAT	Soga1	Suppressor of glucose, autophagy associated 1	1	LSVLQQELNAFTR	LSVLQQELNAFTR	2	LSVLQQELNAFTR2	2008.11		4782.08
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	LSVLVDEYQMDFHPSPVVLK	LSVLVDEYQMDFHPSPVVLK	3	LSVLVDEYQMDFHPSPVVLK3	31554.3	37520.7	20151
D3ZF13	D3ZF13	D3ZF13_RAT	Ndufab1	Acyl carrier protein	1	LSVNSHFMK	LSVNSHFMK	2	LSVNSHFMK2	35831.4	31930.4	18797.8
E9PT79	E9PT79	E9PT79_RAT	Tsn	Translin	1	LSVNSVTAGDYSR	LSVNSVTAGDYSR	2	LSVNSVTAGDYSR2	53093.9	46957.1	39168.8
P01026	P01026	CO3_RAT	C3	Complement C3	1	LSVNTPNNR	LSVNTPNNR	2	LSVNTPNNR2	3.71842e+06	3.71247e+06	3.30216e+06
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	LSVPATFMLVSLDEGPGPPIK	LSVPATFMLVSLDEGPGPPIK	3	LSVPATFMLVSLDEGPGPPIK3	14763.8	21478.1	14706.4
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	LSVPDGLK	LSVPDGLK	2	LSVPDGLK2	173859	196206	171471
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	LSVPDVPK	LSVPDVPK	2	LSVPDVPK2	99754.7	73853.3	71389.8
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	LSVPDVPKEHFGQR	LSVPDVPKEHFGQR	4	LSVPDVPKEHFGQR4	8649.53	8370.12	18361.6
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	LSVPEGWR	LSVPEGWR	2	LSVPEGWR2	83916.8	91353.4	77323.6
P08721	P08721	OSTP_RAT	Spp1	Osteopontin	1	LSVPSDQDSNGK	LSVPSDQDSNGK	2	LSVPSDQDSNGK2	1.03907e+06	1.13676e+06	1.05638e+06
P28840	P28840	NEC1_RAT	Pcsk1	Neuroendocrine convertase 1	1	LSVPYEGLYEALEK	LSVPYEGLYEALEK	2	LSVPYEGLYEALEK2	26014.6	18150.2	10953.3
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	LSVPYVPQVTDEDR	LSVPYVPQVTDEDR	2	LSVPYVPQVTDEDR2	87645.1	89586.7	76015.6
D3ZJR7	D3ZJR7	D3ZJR7_RAT	Dsc2	Desmocollin 2	1	LSVQDKDLVNSPNWR	LSVQDKDLVNSPNWR	2	LSVQDKDLVNSPNWR2	4009.04	1694.07	1824.43
D3ZJR7	D3ZJR7	D3ZJR7_RAT	Dsc2	Desmocollin 2	1	LSVQDKDLVNSPNWR	LSVQDKDLVNSPNWR	3	LSVQDKDLVNSPNWR3	91975.2	85534.6	98053.9
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	LSVQDPVVVMAEDSQEK	LSVQDPVVVMAEDSQEK	2	LSVQDPVVVMAEDSQEK2	7102.39	6828.02	6877.49
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	LSVQDPVVVMAEDSQEK	LSVQDPVVVMAEDSQEK	3	LSVQDPVVVMAEDSQEK3	30204.1	33011.1	19068.3
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	LSVQGEVSTFTGK	LSVQGEVSTFTGK	2	LSVQGEVSTFTGK2	107169	101958	130822
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	LSVQSSGSR	LSVQSSGSR	2	LSVQSSGSR2	50164.8	55309.6	46884.3
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	LSVQSSPECIVGK	LSVQSSPEC(UniMod:4)IVGK	2	LSVQSSPEC(UniMod:4)IVGK2	391007	353341	347563
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	LSVQTHSTDDYINANYMPGYHSK	LSVQTHSTDDYINANYMPGYHSK	3	LSVQTHSTDDYINANYMPGYHSK3	50619.8	42238.8	41998.8
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	LSVQTHSTDDYINANYMPGYHSK	LSVQTHSTDDYINANYMPGYHSK	4	LSVQTHSTDDYINANYMPGYHSK4	587163	514203	574549
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	LSVSNMVHTAK	LSVSNMVHTAK	2	LSVSNMVHTAK2	7579.03	7378.86	8609.7
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	LSVSNMVHTAK	LSVSNMVHTAK	3	LSVSNMVHTAK3	31481.3	32319.4	25864.6
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	LSVSPLPTLAK	LSVSPLPTLAK	2	LSVSPLPTLAK2	164988	174865	198843
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	LSVSSNDTQESGNSSGPSPGAK	LSVSSNDTQESGNSSGPSPGAK	3	LSVSSNDTQESGNSSGPSPGAK3	1934.83		1496.48
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	LSVTPSDR	LSVTPSDR	2	LSVTPSDR2	82143.3	80189.3	81149.1
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	LSVTVDPK	LSVTVDPK	2	LSVTVDPK2	17393.4	11034.9	10338.7
D4AD29	D4AD29	D4AD29_RAT	Lamtor4	Ragulator complex protein LAMTOR4	1	LSVVFGEHTLLVTVSGQR	LSVVFGEHTLLVTVSGQR	3	LSVVFGEHTLLVTVSGQR3	3320.64	7274.45	
F1M9D0	F1M9D0	F1M9D0_RAT	Map3k2	Mitogen activated protein kinase kinase kinase 2	1	LSVVGPPNR	LSVVGPPNR	2	LSVVGPPNR2	6242.63	7060.38	4921.07
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	LSVVSLLVNSPR	LSVVSLLVNSPR	2	LSVVSLLVNSPR2	28907.4	24859.2	20515.5
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	LSVVSLLVNSPR	LSVVSLLVNSPR	3	LSVVSLLVNSPR3	1226.53	2049.67	7558.46
Q3ZBA0	Q3ZBA0	TCPR1_RAT	Tecpr1	Tectonin beta-propeller repeat-containing protein 1	1	LSVWAVSLQGK	LSVWAVSLQGK	2	LSVWAVSLQGK2		3629.66	
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	LSWAAAAGR	LSWAAAAGR	2	LSWAAAAGR2	41557.9	49506	30986.9
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	LSWEAGDDHNSK	LSWEAGDDHNSK	2	LSWEAGDDHNSK2	1841.47	3346.16	
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	LSWEAGDDHNSK	LSWEAGDDHNSK	3	LSWEAGDDHNSK3	25909.4	36119.2	25701.5
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	LSWGVAR	LSWGVAR	2	LSWGVAR2	542464	643646	569470
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	LSWSDTAR	LSWSDTAR	2	LSWSDTAR2	25405.1	28031	20853.2
A0A8I5ZPV1	A0A8I5ZPV1	A0A8I5ZPV1_RAT	Tbc1d22a	TBC1 domain family, member 22a	1	LSWSGIPKPVRPMTWK	LSWSGIPKPVRPMTWK	4	LSWSGIPKPVRPMTWK4	11165.9	17180.7	13288.1
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	LSYDHAQSMIENPTEK	LSYDHAQSMIENPTEK	2	LSYDHAQSMIENPTEK2		4439.98	
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	LSYDHAQSMIENPTEK	LSYDHAQSMIENPTEK	3	LSYDHAQSMIENPTEK3	38109.5	57807.6	42687.7
A0A8J8XL70	A0A8J8XL70	A0A8J8XL70_RAT	Serpinf1	Serpin family F member 1	1	LSYEGDVTNSLQDMK	LSYEGDVTNSLQDMK	2	LSYEGDVTNSLQDMK2	53647.4	45244.4	32284.4
A0A8J8XL70	A0A8J8XL70	A0A8J8XL70_RAT	Serpinf1	Serpin family F member 1	1	LSYEGDVTNSLQDMK	LSYEGDVTNSLQDMK	3	LSYEGDVTNSLQDMK3	33150.7	30440.3	41624.2
Q6MG06	Q6MG06	GNL1_RAT	Gnl1	Guanine nucleotide-binding protein-like 1	1	LSYFEHNLETWR	LSYFEHNLETWR	3	LSYFEHNLETWR3	8602.88	9080	4623.08
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	LSYFNELETINTK	LSYFNELETINTK	2	LSYFNELETINTK2		11613	12734.4
Q924C3	Q924C3	ENPP1_RAT	Enpp1	Ectonucleotide pyrophosphatase/phosphodiesterase family member 1	1	LSYGFLTPPR	LSYGFLTPPR	2	LSYGFLTPPR2	7199.13	3367.75	
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	LSYLEEAVMHLDHSDPITR	LSYLEEAVMHLDHSDPITR	3	LSYLEEAVMHLDHSDPITR3	1102.89		2426.55
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	LSYLEEAVMHLDHSDPITR	LSYLEEAVMHLDHSDPITR	4	LSYLEEAVMHLDHSDPITR4	29641.3	25286.1	28400.2
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	LSYLLPSARPELGVGPGR	LSYLLPSARPELGVGPGR	3	LSYLLPSARPELGVGPGR3	52171.6	53272.8	66920.9
Q5M9G9	Q5M9G9	FAKD4_RAT	Tbrg4	FAST kinase domain-containing protein 4	1	LSYLLSEKPK	LSYLLSEKPK	3	LSYLLSEKPK3	19744	24349.7	14152.7
Q6AYB2	Q6AYB2	Q6AYB2_RAT	Sphk2	Sphingosine kinase 2	1	LSYLPATTEPALPIPGHGLPR	LSYLPATTEPALPIPGHGLPR	3	LSYLPATTEPALPIPGHGLPR3	26096.1	23572.7	37554
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	LSYLTSWLR	LSYLTSWLR	2	LSYLTSWLR2	4.39045e+06	3.7993e+06	3.39021e+06
Q5BJQ2	Q5BJQ2	MINY1_RAT	Mindy1	Ubiquitin carboxyl-terminal hydrolase MINDY-1	1	LSYNQLVEK	LSYNQLVEK	2	LSYNQLVEK2	94316.9	84579.3	99972.3
D4A4W9	P11250;D4A4W9	D4A4W9_RAT	Rpl34-ps1	60S ribosomal protein L34	0	LSYNTASNK	LSYNTASNK	2	LSYNTASNK2	22561.1	23883.8	18389.6
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	LSYQDGFPGTEISCWTVK	LSYQDGFPGTEISC(UniMod:4)WTVK	3	LSYQDGFPGTEISC(UniMod:4)WTVK3	142895	189336	131475
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	LSYQDGFPGTEISCWTVKI	LSYQDGFPGTEISC(UniMod:4)WTVKI	3	LSYQDGFPGTEISC(UniMod:4)WTVKI3		3902.68	13903.2
P30427	P30427	PLEC_RAT	Plec	Plectin	1	LSYTQLLK	LSYTQLLK	2	LSYTQLLK2	3045.65	5782.84	3457.98
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	LSYYEYDFER	LSYYEYDFER	2	LSYYEYDFER2	40131.1	37825.5	55128.6
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	LTAALSSSQK	LTAALSSSQK	2	LTAALSSSQK2	35830.6	42763.5	39314.6
D3Z8E0	D3Z8E0	D3Z8E0_RAT	Rps6ka3	Ribosomal protein S6 kinase	1	LTAALVLR	LTAALVLR	2	LTAALVLR2	10581.5	9988.27	3581.37
Q9WVK3	Q9WVK3	PECR_RAT	Pecr	Peroxisomal trans-2-enoyl-CoA reductase	1	LTAAVDELR	LTAAVDELR	2	LTAAVDELR2	21980.1	23741.8	22125.8
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	LTADGCCTLPAR	LTADGC(UniMod:4)C(UniMod:4)TLPAR	2	LTADGC(UniMod:4)C(UniMod:4)TLPAR2	137867	140519	129441
A0A0G2KAH7	A0A0G2KAH7	A0A0G2KAH7_RAT	Ext2	Exostosin glycosyltransferase 2	1	LTADSPIPER	LTADSPIPER	2	LTADSPIPER2	5205.29	2668.85	9383.54
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	LTADSSHYLCHEVAPPR	LTADSSHYLC(UniMod:4)HEVAPPR	4	LTADSSHYLC(UniMod:4)HEVAPPR4		4730.09	3805.87
P30427	P30427	PLEC_RAT	Plec	Plectin	1	LTAEDLYEAR	LTAEDLYEAR	2	LTAEDLYEAR2	2742.86	3435.79	4997.14
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	LTAEELLNK	LTAEELLNK	2	LTAEELLNK2	178062	221213	212664
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	LTAEELLNKDFAK	LTAEELLNKDFAK	3	LTAEELLNKDFAK3	64264.6	61317	85741.7
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	LTAEEMDER	LTAEEMDER	2	LTAEEMDER2	88230.9	97133.6	88548.5
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	LTAEFEEAQSTACR	LTAEFEEAQSTAC(UniMod:4)R	2	LTAEFEEAQSTAC(UniMod:4)R2	24772.2	19231.8	31799.5
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	LTAELQDTK	LTAELQDTK	2	LTAELQDTK2	30002.7	39510	33788.3
P31325	P31325	PHKG2_RAT	Phkg2	Phosphorylase b kinase gamma catalytic chain, liver/testis isoform	1	LTAEQALQHPFFER	LTAEQALQHPFFER	3	LTAEQALQHPFFER3	26251.5	26664.7	32502.1
A0A8I6A4U0	P20767;A0A8I6A4U0;A0A8I5ZZL6	A0A8I6A4U0_RAT	ENSRNOG00000064589	Ig-like domain-containing protein	0	LTAEQWR	LTAEQWR	2	LTAEQWR2	4.38921e+06	4.60324e+06	4.7559e+06
A0A8I6A8L3	A0A8I6A8L3	A0A8I6A8L3_RAT	Dnpep	Aspartyl aminopeptidase	1	LTAFEEAIPK	LTAFEEAIPK	2	LTAFEEAIPK2	36832.1	43150.4	47338
Q5HZE4	Q5HZE4	MTNA_RAT	Mri1	Methylthioribose-1-phosphate isomerase	1	LTAFELVYEK	LTAFELVYEK	2	LTAFELVYEK2	16774.8	13152.2	11540.5
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	LTAGTPWGQSQEK	LTAGTPWGQSQEK	2	LTAGTPWGQSQEK2	2.67052e+06	3.03334e+06	2.99813e+06
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	LTAGTPWGQSQEK	LTAGTPWGQSQEK	3	LTAGTPWGQSQEK3	9357.43	9724.82	7337.01
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	LTAGTPWGQSQEKEGDK	LTAGTPWGQSQEKEGDK	3	LTAGTPWGQSQEKEGDK3	8557.56	9698.68	5031.64
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	LTAGTPWGQSQEKEGDKDSATPK	LTAGTPWGQSQEKEGDKDSATPK	3	LTAGTPWGQSQEKEGDKDSATPK3	62169.8	74600.5	69670.5
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	LTAGTPWGQSQEKEGDKDSATPK	LTAGTPWGQSQEKEGDKDSATPK	4	LTAGTPWGQSQEKEGDKDSATPK4	125359	179482	200769
Q6IE52	Q6IE52	MUG2_RAT	Mug2	Murinoglobulin-2	1	LTAHPAPSPEDLALSTGTIK	LTAHPAPSPEDLALSTGTIK	3	LTAHPAPSPEDLALSTGTIK3	508424	364773	386922
Q6IE52	Q6IE52	MUG2_RAT	Mug2	Murinoglobulin-2	1	LTAHPAPSPEDLALSTGTIK	LTAHPAPSPEDLALSTGTIK	4	LTAHPAPSPEDLALSTGTIK4	1207.82		
A0A0G2JZC4	A0A0G2JZC4	A0A0G2JZC4_RAT	Sema6d	Semaphorin 6D	1	LTAIEVDR	LTAIEVDR	2	LTAIEVDR2	18213.1	10850.3	11842.9
F7EMB2	F7EMB2	F7EMB2_RAT	Rtraf	RNA transcription, translation and transport factor protein	1	LTALDYHNPTGFNCK	LTALDYHNPTGFNC(UniMod:4)K	3	LTALDYHNPTGFNC(UniMod:4)K3	14829.8	14199.7	20776
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	LTALHPPEK	LTALHPPEK	2	LTALHPPEK2	1073.72	2368.36	
A0A8I5ZXB9	A0A8I5ZXB9	A0A8I5ZXB9_RAT	Kifap3	Kinesin-associated protein 3	1	LTALLGNENYK	LTALLGNENYK	2	LTALLGNENYK2	18153.4	22299.5	26526.1
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	LTALVPSESAIR	LTALVPSESAIR	2	LTALVPSESAIR2	30430.5	29250.9	29844.6
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	LTAMLISSK	LTAMLISSK	2	LTAMLISSK2	7978.95	13191.5	15189.3
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	LTANETQSASSTLQK	LTANETQSASSTLQK	2	LTANETQSASSTLQK2	3286.02	2740.51	1194.68
D4A7R3	D4A7R3	D4A7R3_RAT	Nup205	Nucleoporin 205	1	LTAPEDVFSK	LTAPEDVFSK	2	LTAPEDVFSK2	9865.02	11252.4	15699.4
Q5M9F6	Q5M9F6	Q5M9F6_RAT	Mthfs	5-formyltetrahydrofolate cyclo-ligase	1	LTAPEEVALLPK	LTAPEEVALLPK	2	LTAPEEVALLPK2	22025.4	17815.2	21412.3
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	LTAQPAPSPEDLALSMGTIK	LTAQPAPSPEDLALSMGTIK	3	LTAQPAPSPEDLALSMGTIK3	245006	189250	214956
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	LTAQPAPSPEDLALSMGTIK	LTAQPAPSPEDLALSMGTIK	4	LTAQPAPSPEDLALSMGTIK4	98510.2	65962.9	71077.3
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	LTAQPAPSPEDLALSMGTIKWLTK	LTAQPAPSPEDLALSMGTIKWLTK	3	LTAQPAPSPEDLALSMGTIKWLTK3	339456	356413	357977
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	LTAQSAPSPK	LTAQSAPSPK	2	LTAQSAPSPK2	1.19165e+06	1.28933e+06	1.23238e+06
P15087	P15087	CBPE_RAT	Cpe	Carboxypeptidase E	1	LTASAPGYLAITK	LTASAPGYLAITK	2	LTASAPGYLAITK2	10890.8	5604.12	11132.5
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	LTASEGSLQR	LTASEGSLQR	2	LTASEGSLQR2	86167.9	90455.1	81867
D3ZQI6	D3ZQI6	D3ZQI6_RAT	Xpo4	Exportin 4	1	LTASSTPPTLDR	LTASSTPPTLDR	2	LTASSTPPTLDR2	9439.72	12918.9	13717.2
D3ZQI6	D3ZQI6	D3ZQI6_RAT	Xpo4	Exportin 4	1	LTASSTPPTLDRK	LTASSTPPTLDRK	3	LTASSTPPTLDRK3	12168.4	13750.5	19105.2
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	LTATPSDLVLR	LTATPSDLVLR	2	LTATPSDLVLR2	262048	251141	230140
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	LTAVEGSMK	LTAVEGSMK	2	LTAVEGSMK2	39668.4	43676.6	45814.3
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	LTAVLNSPLWK	LTAVLNSPLWK	2	LTAVLNSPLWK2	14110.1	7984.63	8558.82
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	LTAVLNSPLWKPVFR	LTAVLNSPLWKPVFR	2	LTAVLNSPLWKPVFR2	4738.72	2239.37	
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	LTAVLNSPLWKPVFR	LTAVLNSPLWKPVFR	3	LTAVLNSPLWKPVFR3	37864.2	50794.7	63966.3
P07895	P07895	SODM_RAT	Sod2	Superoxide dismutase [Mn], mitochondrial	1	LTAVSVGVQGSGWGWLGFNK	LTAVSVGVQGSGWGWLGFNK	3	LTAVSVGVQGSGWGWLGFNK3	13224.8	11621.5	6944.36
Q6AYF8	Q6AYF8	Q6AYF8_RAT	Serpinb9	Serpin family B member 9	1	LTAWTNPDFMK	LTAWTNPDFMK	2	LTAWTNPDFMK2	25719.5	32337.9	26345.2
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	LTAWYMEK	LTAWYMEK	2	LTAWYMEK2	10355.8	11785.8	8257.8
Q5XIE8	Q5XIE8	ITM2B_RAT	Itm2b	Integral membrane protein 2B	1	LTAYLDLNLDK	LTAYLDLNLDK	2	LTAYLDLNLDK2	53330.8	46314.9	37587
Q76LD0	Q76LD0	CRDL1_RAT	Chrdl1	Chordin-like protein 1	1	LTCAFPVSVPDSCCR	LTC(UniMod:4)AFPVSVPDSC(UniMod:4)C(UniMod:4)R	2	LTC(UniMod:4)AFPVSVPDSC(UniMod:4)C(UniMod:4)R2	126278	136817	150275
Q76LD0	Q76LD0	CRDL1_RAT	Chrdl1	Chordin-like protein 1	1	LTCAFPVSVPDSCCR	LTC(UniMod:4)AFPVSVPDSC(UniMod:4)C(UniMod:4)R	3	LTC(UniMod:4)AFPVSVPDSC(UniMod:4)C(UniMod:4)R3	8189.61	12659.7	15924.8
D3ZZC5	D3ZZC5	D3ZZC5_RAT	Tradd	Tumor necrosis factor receptor type 1-associated DEATH domain protein	1	LTCDSTGQGGATQVAPAGSK	LTC(UniMod:4)DSTGQGGATQVAPAGSK	2	LTC(UniMod:4)DSTGQGGATQVAPAGSK2	7278.13	9126.21	4180.64
D3ZZC5	D3ZZC5	D3ZZC5_RAT	Tradd	Tumor necrosis factor receptor type 1-associated DEATH domain protein	1	LTCDSTGQGGATQVAPAGSK	LTC(UniMod:4)DSTGQGGATQVAPAGSK	3	LTC(UniMod:4)DSTGQGGATQVAPAGSK3	6559.22	4335.68	5763.56
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	LTCLFQLK	LTC(UniMod:4)LFQLK	2	LTC(UniMod:4)LFQLK2	35285.2	35656.7	20828.3
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	LTCQCLGFGSGHFR	LTC(UniMod:4)QC(UniMod:4)LGFGSGHFR	2	LTC(UniMod:4)QC(UniMod:4)LGFGSGHFR2	4.01724e+06	4.45793e+06	3.97544e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	LTCQCLGFGSGHFR	LTC(UniMod:4)QC(UniMod:4)LGFGSGHFR	3	LTC(UniMod:4)QC(UniMod:4)LGFGSGHFR3	56758	78676.5	46865.5
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	LTCQCLGFGSGHFR	LTC(UniMod:4)QC(UniMod:4)LGFGSGHFR	4	LTC(UniMod:4)QC(UniMod:4)LGFGSGHFR4	9944.21	6489.5	6386.01
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	LTCQCLGFGSGHFRCDSSK	LTC(UniMod:4)QC(UniMod:4)LGFGSGHFRC(UniMod:4)DSSK	3	LTC(UniMod:4)QC(UniMod:4)LGFGSGHFRC(UniMod:4)DSSK3	6974.85	6695	16100.7
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	LTCQCLGFGSGHFRCDSSK	LTC(UniMod:4)QC(UniMod:4)LGFGSGHFRC(UniMod:4)DSSK	4	LTC(UniMod:4)QC(UniMod:4)LGFGSGHFRC(UniMod:4)DSSK4	61808.1	65797.5	92993.3
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	LTCQGNAQWDGTEPR	LTC(UniMod:4)QGNAQWDGTEPR	2	LTC(UniMod:4)QGNAQWDGTEPR2	31713.8	33206.9	36729.1
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	LTDADAMK	LTDADAMK	1	LTDADAMK1	4168.35	2141.81	4183.09
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	LTDADAMK	LTDADAMK	2	LTDADAMK2	1.47097e+06	1.40406e+06	1.5679e+06
A0A0G2K528	A0A0G2K528	A0A0G2K528_RAT	Stx16	Syntaxin 16	1	LTDAFLLLR	LTDAFLLLR	2	LTDAFLLLR2	17846	20806.2	19203.8
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	LTDDHVQFLIYQILR	LTDDHVQFLIYQILR	2	LTDDHVQFLIYQILR2	26229.9	19277.4	17484.8
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	LTDDHVQFLIYQILR	LTDDHVQFLIYQILR	3	LTDDHVQFLIYQILR3	156806	140470	145347
P20069	P20069	MPPA_RAT	Pmpca	Mitochondrial-processing peptidase subunit alpha	1	LTDEEIEMTR	LTDEEIEMTR	2	LTDEEIEMTR2	24440.1	22311.5	37933.2
P0DP29;P0DP30;P0DP31	P0DP30;P0DP29;P0DP31	CALM1_RAT;CALM2_RAT;CALM3_RAT	Calm1;Calm2;Calm3	Calmodulin-1	0	LTDEEVDEMIR	LTDEEVDEMIR	2	LTDEEVDEMIR2	36378.9	29438.3	27536
D3ZW15	D3ZW15	D3ZW15_RAT	Sec24b	SEC24 homolog B, COPII coat complex component	1	LTDEGAIHVNDR	LTDEGAIHVNDR	3	LTDEGAIHVNDR3	20455	33886	24354.3
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	LTDELAPPKPPLPEGEVPPPRPPPPEEK	LTDELAPPKPPLPEGEVPPPRPPPPEEK	4	LTDELAPPKPPLPEGEVPPPRPPPPEEK4	90383.2	73734.9	72864.3
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	LTDEMVMIMGGK	LTDEMVMIMGGK	2	LTDEMVMIMGGK2	16384	16305.2	16477.8
Q66H84	Q5BK52;Q66H84;Q6V9Y3;Q80ZF4	MAPK3_RAT	Mapkapk3	MAP kinase-activated protein kinase 3	0	LTDFGFAK	LTDFGFAK	2	LTDFGFAK2	125727	110984	114988
Q64303	Q64303;Q62829;P35465	PAK2_RAT	Pak2	Serine/threonine-protein kinase PAK 2	0	LTDFGFCAQITPEQSK	LTDFGFC(UniMod:4)AQITPEQSK	2	LTDFGFC(UniMod:4)AQITPEQSK2	25853.8	20225.1	18775.3
P67999	P67999;D4AE24	KS6B1_RAT	Rps6kb1	Ribosomal protein S6 kinase beta-1	0	LTDFGLCK	LTDFGLC(UniMod:4)K	2	LTDFGLC(UniMod:4)K2		18153.5	
D3Z8E0	Q63531;A0A8I6AUJ4;A0A8I6AQN6;D3Z8E0;A0A8I6ATY6;Q810W7;D4A355;A0A0G2JVL3	D3Z8E0_RAT	Rps6ka3	Ribosomal protein S6 kinase	0	LTDFGLSK	LTDFGLSK	2	LTDFGLSK2	29391.8	21078.9	30389.3
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	LTDFLPK	LTDFLPK	2	LTDFLPK2	24431.5	19867.9	28322.7
P05696	P68403;P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	0	LTDFNFLMVLGK	LTDFNFLMVLGK	2	LTDFNFLMVLGK2	106812	102156	86221.6
P15650	P15650	ACADL_RAT	Acadl	Long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	LTDIGIR	LTDIGIR	2	LTDIGIR2	86486.8	84422.8	87237.9
D3ZAP9	D3ZAP9	D3ZAP9_RAT	Gpd1l1	Glycerol-3-phosphate dehydrogenase [NAD(+)]	1	LTDIINNDHENVK	LTDIINNDHENVK	3	LTDIINNDHENVK3	14899.7	9458.42	12051.2
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	LTDINQLPET	LTDINQLPET	2	LTDINQLPET2	7227.57	6360.36	
P54690	P54690	BCAT1_RAT	Bcat1	Branched-chain-amino-acid aminotransferase, cytosolic	1	LTDIQYGR	LTDIQYGR	2	LTDIQYGR2	25696.7	23528.5	25784.9
A0A0G2K8Q7	A0A0G2K375;A0A0G2K8Q7	A0A0G2K8Q7_RAT	Lsm2	U6 snRNA-associated Sm-like protein LSm2	0	LTDISVTDPEK	LTDISVTDPEK	2	LTDISVTDPEK2	8341.06	3684.94	
A0A0G2K8Q7	A0A0G2K375;A0A0G2K8Q7	A0A0G2K8Q7_RAT	Lsm2	U6 snRNA-associated Sm-like protein LSm2	0	LTDISVTDPEKYPHMLSVK	LTDISVTDPEKYPHMLSVK	3	LTDISVTDPEKYPHMLSVK3	7242.84	6345.44	15462
A0A0G2K8Q7	A0A0G2K375;A0A0G2K8Q7	A0A0G2K8Q7_RAT	Lsm2	U6 snRNA-associated Sm-like protein LSm2	0	LTDISVTDPEKYPHMLSVK	LTDISVTDPEKYPHMLSVK	4	LTDISVTDPEKYPHMLSVK4	20341.5	12852.3	20956.1
P18421	P18421	PSB1_RAT	Psmb1	Proteasome subunit beta type-1	1	LTDKTVIGCSGFHGDCLTLTK	LTDKTVIGC(UniMod:4)SGFHGDC(UniMod:4)LTLTK	4	LTDKTVIGC(UniMod:4)SGFHGDC(UniMod:4)LTLTK4	4749.56	11990.4	5484.06
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	LTDLEKEK	LTDLEKEK	2	LTDLEKEK2	9470.14	9755.91	5047.57
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	LTDLETLALLIAALSHDLDHR	LTDLETLALLIAALSHDLDHR	3	LTDLETLALLIAALSHDLDHR3		15543	18836.2
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	LTDLETLALLIAALSHDLDHR	LTDLETLALLIAALSHDLDHR	4	LTDLETLALLIAALSHDLDHR4	3866.76	13828	5236.36
Q63686	Q63686	CDK16_RAT	Cdk16	Cyclin-dependent kinase 16	1	LTDNLVALK	LTDNLVALK	2	LTDNLVALK2	26059	19859.6	28969.5
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	LTDNSNQFQTEVGK	LTDNSNQFQTEVGK	2	LTDNSNQFQTEVGK2	69863.7	76167.9	76623.5
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	LTDPIPTTETSIAPR	LTDPIPTTETSIAPR	2	LTDPIPTTETSIAPR2	117818	112534	109198
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	LTDPIPTTETSIAPR	LTDPIPTTETSIAPR	3	LTDPIPTTETSIAPR3	7013.91	8763.41	6272.01
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	LTDPPQDVTVELGK	LTDPPQDVTVELGK	2	LTDPPQDVTVELGK2	17556.2	26541.7	15113.8
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	LTDQLPLIIVCDR	LTDQLPLIIVC(UniMod:4)DR	2	LTDQLPLIIVC(UniMod:4)DR2	17206.8	34009.6	30504.1
Q5U2Z3	Q5U2Z3	NP1L4_RAT	Nap1l4	Nucleosome assembly protein 1-like 4	1	LTDQVMQNPQVLAALQER	LTDQVMQNPQVLAALQER	3	LTDQVMQNPQVLAALQER3	215249	209730	270587
D4A4L5	D4A4L5;A0A8I5ZSL2	D4A4L5_RAT	Isca2	Iron-sulfur cluster assembly 2	0	LTDSCVQR	LTDSC(UniMod:4)VQR	2	LTDSC(UniMod:4)VQR2	17015.7	10908.2	11125.2
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	LTDSGYLQLYYEQGLEKPFR	LTDSGYLQLYYEQGLEKPFR	3	LTDSGYLQLYYEQGLEKPFR3	15042.7	19654.8	17776.8
Q5M887	Q5M887	TPC13_RAT	Trappc13	Trafficking protein particle complex subunit 13	1	LTDTFLK	LTDTFLK	2	LTDTFLK2	56503.8	58393.1	57371.8
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	LTDTLVSK	LTDTLVSK	2	LTDTLVSK2	34728.3	31908.8	42166.5
O08874	O08874	PKN2_RAT	Pkn2	Serine/threonine-protein kinase N2	1	LTDWSALLDKK	LTDWSALLDKK	3	LTDWSALLDKK3	1578.09	4707.35	4413.56
F1M7Y5	F1M7Y5;P09217	KPCI_RAT	Prkci	Protein kinase C iota type	0	LTDYGMCK	LTDYGMC(UniMod:4)K	2	LTDYGMC(UniMod:4)K2	6996.5	11792.7	13270.9
Q6P4Z9	Q6P4Z9	CSN8_RAT	Cops8	COP9 signalosome complex subunit 8	1	LTDYVAFLEN	LTDYVAFLEN	2	LTDYVAFLEN2	10268.2	10287.7	9530.9
D3ZXF9	D3ZXF9	D3ZXF9_RAT	Mrpl12	Mitochondrial ribosomal protein L12	1	LTEAKPVDK	LTEAKPVDK	2	LTEAKPVDK2	9058.52		2751.42
D3ZZL9	D3ZZL9	GCC2_RAT	Gcc2	GRIP and coiled-coil domain-containing protein 2	1	LTEASLWHTEFTK	LTEASLWHTEFTK	3	LTEASLWHTEFTK3	3000.74	4457.14	2938.85
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	LTEAVLMR	LTEAVLMR	2	LTEAVLMR2	14388	8729.06	11407.2
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	LTEAVVTEYLNSGNANDAVSGVR	LTEAVVTEYLNSGNANDAVSGVR	3	LTEAVVTEYLNSGNANDAVSGVR3	45450.2	34093.2	45980.4
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	LTEAYEVQDASTSSMYTALTR	LTEAYEVQDASTSSMYTALTR	3	LTEAYEVQDASTSSMYTALTR3	49970	59360.3	72602.3
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	LTECLETILNK	LTEC(UniMod:4)LETILNK	2	LTEC(UniMod:4)LETILNK2	18504.2	23255.3	11803.5
A0A0G2JZH8	A0A0G2JZH8	A0A0G2JZH8_RAT	Pdhx	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	LTEDEEGNPQVR	LTEDEEGNPQVR	2	LTEDEEGNPQVR2	23948	18408	29515.5
A0A0G2K1A4	A0A0G2K1A4	A0A0G2K1A4_RAT	Evi5l	Ecotropic viral integration site 5-like	1	LTEDFVSHLETELEQSR	LTEDFVSHLETELEQSR	3	LTEDFVSHLETELEQSR3	14669.8	10345.7	14933.5
B2RYP8	B2RYP8	B2RYP8_RAT	Tubgcp2	Gamma-tubulin complex component	1	LTEDKETLQYLQQNAK	LTEDKETLQYLQQNAK	3	LTEDKETLQYLQQNAK3	6736.61		
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	LTEDLEYHELLDR	LTEDLEYHELLDR	2	LTEDLEYHELLDR2	8044.15	6852.09	3830.41
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	LTEDLEYHELLDR	LTEDLEYHELLDR	3	LTEDLEYHELLDR3	150659	144652	129566
Q0PMD2	Q0PMD2	ANTR1_RAT	Antxr1	Anthrax toxin receptor 1	1	LTEDREQIR	LTEDREQIR	3	LTEDREQIR3	281008	323831	338767
A0A8I6GK59	A0A8I6GK59	A0A8I6GK59_RAT	Bmp2k	BMP-2 inducible kinase	1	LTEEELLDREFDLLR	LTEEELLDREFDLLR	3	LTEEELLDREFDLLR3	16184.5	20403.4	17614.1
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	LTEEFGPHTK	LTEEFGPHTK	3	LTEEFGPHTK3	22327.6	32186.8	28973
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	LTEEGDAPK	LTEEGDAPK	2	LTEEGDAPK2	39022.7	48863	33621.3
Q80Z70	Q80Z70	SE1L1_RAT	Sel1l	Protein sel-1 homolog 1	1	LTEEGSPK	LTEEGSPK	2	LTEEGSPK2			21137.1
Q5FVJ0	Q5FVJ0	RUFY3_RAT	Rufy3	Protein RUFY3	1	LTEELAVANNR	LTEELAVANNR	2	LTEELAVANNR2	6496.67	12813.3	8760.23
Q9WTQ2	Q9WTQ2	PODXL_RAT	Podxl	Podocalyxin	1	LTEELQTVENGYHDNPTLEVMETPSEMQEK	LTEELQTVENGYHDNPTLEVMETPSEMQEK	4	LTEELQTVENGYHDNPTLEVMETPSEMQEK4	64888.2	63756.6	70696.1
P50298	P50298;P50297	ARY2_RAT	Nat2	Arylamine N-acetyltransferase 2	0	LTEENGTWYLDQIR	LTEENGTWYLDQIR	2	LTEENGTWYLDQIR2	1393.07		
P50298	P50298;P50297	ARY2_RAT	Nat2	Arylamine N-acetyltransferase 2	0	LTEENGTWYLDQIR	LTEENGTWYLDQIR	3	LTEENGTWYLDQIR3		2054.14	
D3ZLM5	D3ZLM5	D3ZLM5_RAT	Nhlrc2	NHL repeat containing 2	1	LTEGAPSGWFLK	LTEGAPSGWFLK	2	LTEGAPSGWFLK2	14883.2	15663.3	8796.91
Q71TY3	A0A8I6A2I7;M0RA26;A0A8L2QXZ3;P24051;Q71TY3;A0A8I5Y7E5	RS27_RAT	Rps27	Small ribosomal subunit protein eS27	0	LTEGCSFR	LTEGC(UniMod:4)SFR	2	LTEGC(UniMod:4)SFR2	46547.8	46547.8	46598.3
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	LTEHLGDGEGAELFTENGYGFPSIR	LTEHLGDGEGAELFTENGYGFPSIR	3	LTEHLGDGEGAELFTENGYGFPSIR3	9572.67	31177.9	23736.8
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	LTEIIPK	LTEIIPK	1	LTEIIPK1	9673.67	5097.01	7937.59
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	LTEIIPK	LTEIIPK	2	LTEIIPK2	48223.2	51683	47041.2
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	LTEIKNHPTLIEYHTK	LTEIKNHPTLIEYHTK	4	LTEIKNHPTLIEYHTK4	7828.83	11856.4	3899.18
A0A0G2K1G4	A0A0G2K1G4	A0A0G2K1G4_RAT	Rspry1	Ring finger and SPRY domain containing 1	1	LTEILNLNGEVACQDSGHPAK	LTEILNLNGEVAC(UniMod:4)QDSGHPAK	3	LTEILNLNGEVAC(UniMod:4)QDSGHPAK3	3729.6	4418.36	2697.35
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	LTEIPWLYYILRPNEDEEPPMDCTK	LTEIPWLYYILRPNEDEEPPMDC(UniMod:4)TK	4	LTEIPWLYYILRPNEDEEPPMDC(UniMod:4)TK4	11081.7	18606.4	9868.19
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	LTELEATVR	LTELEATVR	2	LTELEATVR2	121877	121114	128491
Q6P6Q2	Q6P6Q2	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	1	LTELEEALQK	LTELEEALQK	2	LTELEEALQK2	1934.35	2020.9	
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	LTELGTVDPK	LTELGTVDPK	2	LTELGTVDPK2	99464.2	90853.4	86449
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	LTELHTQK	LTELHTQK	2	LTELHTQK2		8387.36	2231.23
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	LTELLER	LTELLER	2	LTELLER2		12276.3	10326.9
A0A8I5ZUD8	A0A8I5ZUD8	A0A8I5ZUD8_RAT	Slc30a9	Proton-coupled zinc antiporter SLC30A9, mitochondrial	1	LTELLESDPSVR	LTELLESDPSVR	2	LTELLESDPSVR2	12067.1	11201	16059.8
P56522	P56522	ADRO_RAT	Fdxr	NADPH:adrenodoxin oxidoreductase, mitochondrial	1	LTELLLR	LTELLLR	2	LTELLLR2	11406.1	10747.5	17493.5
D3ZRJ7	D3ZRJ7	D3ZRJ7_RAT	Lrrk1	non-specific serine/threonine protein kinase	1	LTELPVQFMHSFK	LTELPVQFMHSFK	3	LTELPVQFMHSFK3	5378.85	3507.15	2964.38
G3V6N2	G3V6N2	G3V6N2_RAT	Tmed4	Transmembrane p24 trafficking protein 4	1	LTELQLR	LTELQLR	2	LTELQLR2	126388	138892	151620
P62074	P62074	TIM10_RAT	Timm10	Mitochondrial import inner membrane translocase subunit Tim10	1	LTELSMQDEELMK	LTELSMQDEELMK	2	LTELSMQDEELMK2	13040.3	28029.5	20585.3
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	LTELYQQTIR	LTELYQQTIR	2	LTELYQQTIR2	1503.16	4611.86	3776.91
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LTEMETMQSQLMAEK	LTEMETMQSQLMAEK	2	LTEMETMQSQLMAEK2	6.22594e+06	262664	252874
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LTEMETMQSQLMAEK	LTEMETMQSQLMAEK	3	LTEMETMQSQLMAEK3	3.12049e+06	3.82013e+06	3.8416e+06
A0A0G2K7W5	A0A0G2K7W5	A0A0G2K7W5_RAT	Ahsa2	Activator of HSP90 ATPase homolog 2	1	LTENALQASPVALGVR	LTENALQASPVALGVR	2	LTENALQASPVALGVR2	4552.47	5063.16	6198.64
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	LTENLSALR	LTENLSALR	2	LTENLSALR2	39081.2	42156.2	36022.9
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	LTEPAPVPIHK	LTEPAPVPIHK	2	LTEPAPVPIHK2	15860.4	9948.83	14495.7
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	LTEPAPVPIHK	LTEPAPVPIHK	3	LTEPAPVPIHK3	138227	117854	106106
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	LTEPHIDENHVLSALLPFLEK	LTEPHIDENHVLSALLPFLEK	4	LTEPHIDENHVLSALLPFLEK4	6171.64	12358.2	10293
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	LTEPMVR	LTEPMVR	2	LTEPMVR2	177180	175055	208019
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	LTEPQHGLGSQR	LTEPQHGLGSQR	2	LTEPQHGLGSQR2	95320.2	73773.1	67077.2
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	LTEPQHGLGSQR	LTEPQHGLGSQR	3	LTEPQHGLGSQR3	1.33923e+06	1.31733e+06	1.47857e+06
P20611	P20611	PPAL_RAT	Acp2	Lysosomal acid phosphatase	1	LTEPVIPK	LTEPVIPK	2	LTEPVIPK2	58196.7	52366.3	59962.5
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	LTESLDFTDYASR	LTESLDFTDYASR	2	LTESLDFTDYASR2	12760.8	9223.33	4026.02
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	LTESPCALVASQYGWSGNMER	LTESPC(UniMod:4)ALVASQYGWSGNMER	3	LTESPC(UniMod:4)ALVASQYGWSGNMER3	817845	968395	915142
F1LPV0	F1LPV0	F1LPV0_RAT	Nars1	asparagine--tRNA ligase	1	LTESVDVLMPNVGEIVGGSMR	LTESVDVLMPNVGEIVGGSMR	3	LTESVDVLMPNVGEIVGGSMR3	9637.46	7946.09	
Q9WV97	Q9WV97	TIM9_RAT	Timm9	Mitochondrial import inner membrane translocase subunit Tim9	1	LTETCFLDCVK	LTETC(UniMod:4)FLDC(UniMod:4)VK	2	LTETC(UniMod:4)FLDC(UniMod:4)VK2	7916.68	5812.43	8389.07
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	LTEVADFHYAASK	LTEVADFHYAASK	3	LTEVADFHYAASK3	6447.16	4375.13	9012.54
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	LTEVIAR	LTEVIAR	2	LTEVIAR2	57674	53022.7	50240.8
F1LRI5	F1LRI5	F1LRI5_RAT	Gcn1	GCN1 activator of EIF2AK4	1	LTEVLTDSHVK	LTEVLTDSHVK	3	LTEVLTDSHVK3	4410.93	6807.4	
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	LTEYMEHTYLIHK	LTEYMEHTYLIHK	3	LTEYMEHTYLIHK3	19893.3	14713.9	12333.2
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	LTEYMEHTYLIHK	LTEYMEHTYLIHK	4	LTEYMEHTYLIHK4	23911.7	17375.1	15922.1
D4AD75	D4AD75	D4AD75_RAT	Dpy19l1	Dpy-19 like C-mannosyltransferase 1	1	LTEYPLVINTLK	LTEYPLVINTLK	2	LTEYPLVINTLK2	6015.13	4545.1	
Q9Z2L0	Q9Z2L0	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	1	LTFDSSFSPNTGK	LTFDSSFSPNTGK	2	LTFDSSFSPNTGK2	528746	417853	564013
Q9Z2L0	Q9Z2L0	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	1	LTFDSSFSPNTGKK	LTFDSSFSPNTGKK	2	LTFDSSFSPNTGKK2	12355	17872.6	16076.9
Q9Z2L0	Q9Z2L0	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	1	LTFDSSFSPNTGKK	LTFDSSFSPNTGKK	3	LTFDSSFSPNTGKK3	159678	184961	203671
P81155	P81155	VDAC2_RAT	Vdac2	Voltage-dependent anion-selective channel protein 2	1	LTFDTTFSPNTGK	LTFDTTFSPNTGK	2	LTFDTTFSPNTGK2	344470	316913	375231
P81155	P81155	VDAC2_RAT	Vdac2	Voltage-dependent anion-selective channel protein 2	1	LTFDTTFSPNTGKK	LTFDTTFSPNTGKK	2	LTFDTTFSPNTGKK2	13795.4	12519.2	10338.7
P81155	P81155	VDAC2_RAT	Vdac2	Voltage-dependent anion-selective channel protein 2	1	LTFDTTFSPNTGKK	LTFDTTFSPNTGKK	3	LTFDTTFSPNTGKK3	88080.4	134369	120952
Q6UPR8	Q6UPR8	ERMP1_RAT	Ermp1	Endoplasmic reticulum metallopeptidase 1	1	LTFEATGPSHMSFYVR	LTFEATGPSHMSFYVR	3	LTFEATGPSHMSFYVR3	12169.2		7624.1
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	LTFENGLLK	LTFENGLLK	2	LTFENGLLK2	37718.8	31776.2	35204.4
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	LTFEVVHLAR	LTFEVVHLAR	3	LTFEVVHLAR3	12090.5	18554.9	21084.8
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	LTFEVVNLAR	LTFEVVNLAR	2	LTFEVVNLAR2	51347.4	37618.5	39645.8
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	LTFGAVTGPDPSEEAGTK	LTFGAVTGPDPSEEAGTK	2	LTFGAVTGPDPSEEAGTK2	24143.7	31990.1	26777
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	LTFGDLLPGR	LTFGDLLPGR	2	LTFGDLLPGR2	53957.6	39508.8	41671.1
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	LTFGDLLPGRR	LTFGDLLPGRR	3	LTFGDLLPGRR3	49235.6	56445.4	36176.4
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	LTFIPGFIGSLR	LTFIPGFIGSLR	2	LTFIPGFIGSLR2	907401	986318	1.11445e+06
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	LTFIPGFIGSLR	LTFIPGFIGSLR	3	LTFIPGFIGSLR3	29086	34659	25414.5
D3ZD11	A0A8I5ZKX9;D3ZD11	D3ZD11_RAT	Spcs2	Signal peptidase complex subunit 2	0	LTFISGR	LTFISGR	2	LTFISGR2	387784	387765	362432
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	LTFLNSFK	LTFLNSFK	2	LTFLNSFK2	49163.8	29491.3	24861
P36372	P36372	TAP2_RAT	Tap2	Antigen peptide transporter 2	1	LTFLSLLDLPLTIAAEK	LTFLSLLDLPLTIAAEK	2	LTFLSLLDLPLTIAAEK2	20214.6		
P36372	P36372	TAP2_RAT	Tap2	Antigen peptide transporter 2	1	LTFLSLLDLPLTIAAEK	LTFLSLLDLPLTIAAEK	3	LTFLSLLDLPLTIAAEK3		10639.6	8088.53
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	LTFLVAQK	LTFLVAQK	2	LTFLVAQK2	3437.74	5765.12	8350.22
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	LTFMEEEDKDLYIR	LTFMEEEDKDLYIR	3	LTFMEEEDKDLYIR3	44474.6	49026.8	36925
A0A8I6AE91	A0A8I6AE91	A0A8I6AE91_RAT	Gga2	Golgi associated, gamma adaptin ear containing, ARF binding protein 2	1	LTFNQGGQPFSEVGEVK	LTFNQGGQPFSEVGEVK	2	LTFNQGGQPFSEVGEVK2	15582.2	17322.1	16092.8
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	LTFPGGLLIGCSPGFMNVPK	LTFPGGLLIGC(UniMod:4)SPGFMNVPK	3	LTFPGGLLIGC(UniMod:4)SPGFMNVPK3	9545.42	13618.1	12442.5
A0A8J8XL70	A0A8J8XL70	A0A8J8XL70_RAT	Serpinf1	Serpin family F member 1	1	LTFPLDYHLNRPFIFVLR	LTFPLDYHLNRPFIFVLR	4	LTFPLDYHLNRPFIFVLR4	16998.6	21796.1	10409
D3ZMV1	D3ZMV1	D3ZMV1_RAT	Sla2	Src-like-adaptor 2	1	LTFPSLHALVEHYSELADGICCALR	LTFPSLHALVEHYSELADGIC(UniMod:4)C(UniMod:4)ALR	4	LTFPSLHALVEHYSELADGIC(UniMod:4)C(UniMod:4)ALR4	4903.11	4918.88	4830.09
Q4QQW8	Q4QQW8	PLBL2_RAT	Plbd2	Putative phospholipase B-like 2	1	LTFPTGR	LTFPTGR	2	LTFPTGR2	28385.8	19868.4	24317.5
Q5U2N3	Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	1	LTFPVPSER	LTFPVPSER	2	LTFPVPSER2	9473.91	15677.7	
P83868	P83868	TEBP_RAT	Ptges3	Prostaglandin E synthase 3	1	LTFSCLGGSDNFK	LTFSC(UniMod:4)LGGSDNFK	2	LTFSC(UniMod:4)LGGSDNFK2	645948	678410	728209
A0A8I6ANB2	A0A8I6ANB2	A0A8I6ANB2_RAT	Ppfibp1	PPFIA binding protein 1	1	LTFSNFGNLR	LTFSNFGNLR	2	LTFSNFGNLR2		4692.07	12640.6
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	LTFSPFQVR	LTFSPFQVR	2	LTFSPFQVR2	43210.7	34997.7	44911.5
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	LTFSVIWK	LTFSVIWK	2	LTFSVIWK2	29173.2	36010.1	17056.2
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	LTFSVTLK	LTFSVTLK	2	LTFSVTLK2	78371.6	56934.9	40057.8
B2GUY0	B2GUY0	MA1B1_RAT	Man1b1	Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase	1	LTFVGELAHGR	LTFVGELAHGR	3	LTFVGELAHGR3	8893.35	14508.8	8894.52
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	LTFYAVSAPEK	LTFYAVSAPEK	2	LTFYAVSAPEK2	39196.4	43199.3	36929.5
Q5HZX7	Q5HZX7	LDAH_RAT	Ldah	Lipid droplet-associated hydrolase	1	LTFYYGK	LTFYYGK	2	LTFYYGK2	7378.18	18003	20306.8
Q62714	Q62714	DEF4_RAT	Np4	Defensin alpha 4	1	LTGACGLNGR	LTGAC(UniMod:4)GLNGR	2	LTGAC(UniMod:4)GLNGR2	19256.3		4659.71
P97700	P97700	M2OM_RAT	Slc25a11	Mitochondrial 2-oxoglutarate/malate carrier protein	1	LTGADGTPPGFLLK	LTGADGTPPGFLLK	2	LTGADGTPPGFLLK2	67730.9	89443.9	89965.7
Q29RW1	P12847;A0A8I6AIQ9;Q29RW1	MYH4_RAT	Myh4	Myosin-4	0	LTGAVMHYGNMK	LTGAVMHYGNMK	3	LTGAVMHYGNMK3	3991.05	2150.49	
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	LTGDLIVWSDEMNPAQVIR	LTGDLIVWSDEMNPAQVIR	3	LTGDLIVWSDEMNPAQVIR3	11913		
Q5U305	Q5U305	ERD22_RAT	Kdelr2	ER lumen protein-retaining receptor 2	1	LTGDLSHLAAIVILLLK	LTGDLSHLAAIVILLLK	3	LTGDLSHLAAIVILLLK3		4972.09	2144.11
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	LTGECLK	LTGEC(UniMod:4)LK	2	LTGEC(UniMod:4)LK2	347275	444940	374166
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	LTGELQEGQQNHDAMPR	LTGELQEGQQNHDAMPR	3	LTGELQEGQQNHDAMPR3	79398.5	63382	74033.8
Q63060	Q63060	GLPK_RAT	Gk	Glycerol kinase	1	LTGEPLYNAVVWLDLR	LTGEPLYNAVVWLDLR	2	LTGEPLYNAVVWLDLR2	2705.28	3538.16	496.119
P09606	P09606	GLNA_RAT	Glul	Glutamine synthetase	1	LTGFHETSNINDFSAGVANR	LTGFHETSNINDFSAGVANR	3	LTGFHETSNINDFSAGVANR3	3387.19	9056.41	5712.5
O55012	O55012	PICAL_RAT	Picalm	Phosphatidylinositol-binding clathrin assembly protein	1	LTGGSNWQPK	LTGGSNWQPK	2	LTGGSNWQPK2	13645.9	10425.5	16250.8
Q62609	Q62609	NOE1_RAT	Olfm1	Noelin	1	LTGISDPVTVK	LTGISDPVTVK	2	LTGISDPVTVK2	27039.2	15570.2	28972.7
D3ZII8	D3ZII8	D3ZII8_RAT	Smyd5	Histone-lysine N-trimethyltransferase SMYD5	1	LTGKPGQVLPHPELCSVR	LTGKPGQVLPHPELC(UniMod:4)SVR	3	LTGKPGQVLPHPELC(UniMod:4)SVR3	10756.3		6152.69
D3ZII8	D3ZII8	D3ZII8_RAT	Smyd5	Histone-lysine N-trimethyltransferase SMYD5	1	LTGKPGQVLPHPELCSVR	LTGKPGQVLPHPELC(UniMod:4)SVR	4	LTGKPGQVLPHPELC(UniMod:4)SVR4	42565	30527.2	28351.1
Q6IE70	Q6IE70	PAN2_RAT	Pan2	PAN2-PAN3 deadenylation complex catalytic subunit Pan2	1	LTGLACDR	LTGLAC(UniMod:4)DR	2	LTGLAC(UniMod:4)DR2	8850.68	14671.4	9559.94
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	LTGLDKEK	LTGLDKEK	2	LTGLDKEK2	48166.4	56410.2	52524.7
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	LTGLGQSNAALR	LTGLGQSNAALR	2	LTGLGQSNAALR2	16148.9	14614	17443.4
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	LTGLQCSGSPLPQSDIPR	LTGLQC(UniMod:4)SGSPLPQSDIPR	2	LTGLQC(UniMod:4)SGSPLPQSDIPR2	22596.9	25480.7	23273.3
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	LTGLQCSGSPLPQSDIPR	LTGLQC(UniMod:4)SGSPLPQSDIPR	3	LTGLQC(UniMod:4)SGSPLPQSDIPR3	31814.7	38019.4	31608.6
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	LTGLSEISFR	LTGLSEISFR	2	LTGLSEISFR2	21919.3	25073.7	14368.6
A0A8I6AD02	F1LUV3;F1LUI2;Q9ESV6;M0R660;E9PTN6;A0A0G2JWC0;M0R7H7;A0A0G2K8S2;A0A8I6AD02;A0A8I5ZWK4;F1M2N4;A0A8I6AKY4;A0A8I6B4A1;P04797	A0A8I6AD02_RAT	ENSRNOG00000069655	Glyceraldehyde 3-phosphate dehydrogenase NAD(P) binding domain-containing protein	0	LTGMAFR	LTGMAFR	2	LTGMAFR2	4.82509e+06	4.98129e+06	5.24104e+06
P53678	P53678	AP3M2_RAT	Ap3m2	AP-3 complex subunit mu-2	1	LTGMPDLTLSFMNPR	LTGMPDLTLSFMNPR	2	LTGMPDLTLSFMNPR2	14398.4		
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	LTGMQSSLMMLVDTPDYSEK	LTGMQSSLMMLVDTPDYSEK	3	LTGMQSSLMMLVDTPDYSEK3	4007.97	3899.76	
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	LTGPIQVIHHAK	LTGPIQVIHHAK	2	LTGPIQVIHHAK2	97534.2	64266	51529.8
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	LTGPIQVIHHAK	LTGPIQVIHHAK	3	LTGPIQVIHHAK3	850226	731061	715190
Q9QYM2	Q9QYM2	PARG_RAT	Parg	Poly(ADP-ribose) glycohydrolase	1	LTGQESGLGDSPPFEK	LTGQESGLGDSPPFEK	2	LTGQESGLGDSPPFEK2	1507.7	6285.21	3317.48
P0C865	P0C865	MK07_RAT	Mapk7	Mitogen-activated protein kinase 7	1	LTGQQVAIK	LTGQQVAIK	2	LTGQQVAIK2	4926.4	7528.56	3147.09
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	LTGRQEEDLMNINK	LTGRQEEDLMNINK	3	LTGRQEEDLMNINK3	49199.6	53347.3	56516.3
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	LTGSDVNLVAK	LTGSDVNLVAK	2	LTGSDVNLVAK2	150750	157338	153627
A0A8I6A8Q1	A0A8I6A8Q1	A0A8I6A8Q1_RAT	A2ml1	Alpha-2-macroglobulin-like 1	1	LTGSNPQNTITLSTEESEEVFHINR	LTGSNPQNTITLSTEESEEVFHINR	3	LTGSNPQNTITLSTEESEEVFHINR3	16609	9023.83	9621.83
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	LTGSSGFVTDGPGNYK	LTGSSGFVTDGPGNYK	2	LTGSSGFVTDGPGNYK2	26442.9	27115.7	33631.8
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	LTGSTSSLNK	LTGSTSSLNK	2	LTGSTSSLNK2	36589.4	25250	38798.6
A0A0G2JVP5	A0A0G2JVP5;A0A8I5ZUB7	A0A0G2JVP5_RAT	Paip1	Poly(A) binding protein interacting protein 1	0	LTGSVLEDTWK	LTGSVLEDTWK	2	LTGSVLEDTWK2	19245.1	25160.6	26643.1
A0A0G2JVP5	A0A0G2JVP5	A0A0G2JVP5_RAT	Paip1	Poly(A) binding protein interacting protein 1	1	LTGSVLEDTWKEK	LTGSVLEDTWKEK	3	LTGSVLEDTWKEK3	8391.51	13254.6	9183.49
Q6AXV4	Q6AXV4	SAM50_RAT	Samm50	Sorting and assembly machinery component 50 homolog	1	LTGSYNTMVGNNEGSMVLGLK	LTGSYNTMVGNNEGSMVLGLK	3	LTGSYNTMVGNNEGSMVLGLK3		17906.8	6337.39
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	LTGTLSGWTSPK	LTGTLSGWTSPK	2	LTGTLSGWTSPK2	50847.9	47129.5	50608.1
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	LTGTVGVAAVTAGPGLTNTVTAVK	LTGTVGVAAVTAGPGLTNTVTAVK	3	LTGTVGVAAVTAGPGLTNTVTAVK3	33860.4	41444.8	42176.6
P62703	D3ZX01;P62703	RS4X_RAT	Rps4x	Small ribosomal subunit protein eS4	0	LTGVFAPR	LTGVFAPR	2	LTGVFAPR2	75906.3	72415.2	72548.3
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	LTGVSISQVNHNKPLR	LTGVSISQVNHNKPLR	3	LTGVSISQVNHNKPLR3	19609.3	22266.4	13551.3
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	LTGVSISQVNHNKPLR	LTGVSISQVNHNKPLR	4	LTGVSISQVNHNKPLR4	60003.8	84595.5	59598.8
P19357	P19357	GLUT4_RAT	Slc2a4	Solute carrier family 2, facilitated glucose transporter member 4	1	LTGWADVSDALAELKDEK	LTGWADVSDALAELKDEK	3	LTGWADVSDALAELKDEK3	12777.2	5161.05	19656.1
Q66HF6	Q66HF6	Q66HF6_RAT	Tinag	Tubulointerstitial nephritis antigen	1	LTGWGTLR	LTGWGTLR	2	LTGWGTLR2	17731.2	19817.7	21578.8
Q9JLZ1	Q9JLZ1	GLRX3_RAT	Glrx3	Glutaredoxin-3	1	LTHAAPCMLFMK	LTHAAPC(UniMod:4)MLFMK	2	LTHAAPC(UniMod:4)MLFMK2	5541.07		
Q9JLZ1	Q9JLZ1	GLRX3_RAT	Glrx3	Glutaredoxin-3	1	LTHAAPCMLFMK	LTHAAPC(UniMod:4)MLFMK	3	LTHAAPC(UniMod:4)MLFMK3	35894.8	70752.1	45774.7
P97711	P97711	GRK6_RAT	Grk6	G protein-coupled receptor kinase 6	1	LTHEYLSMAPFADYLDSIYFNR	LTHEYLSMAPFADYLDSIYFNR	3	LTHEYLSMAPFADYLDSIYFNR3	6842.23	4598.58	2647.38
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	LTHFLAQCTR	LTHFLAQC(UniMod:4)TR	2	LTHFLAQC(UniMod:4)TR2	21407.1	18881.8	10924.5
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	LTHFLAQCTR	LTHFLAQC(UniMod:4)TR	3	LTHFLAQC(UniMod:4)TR3	48284.4	62946.5	39746.7
A0A8I6A6G8	A0A8I6A6G8	A0A8I6A6G8_RAT	Hm13	Histocompatibility minor 13	1	LTHFPTVSGSPASLADSMQQK	LTHFPTVSGSPASLADSMQQK	3	LTHFPTVSGSPASLADSMQQK3			8077.64
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	LTHGDSPSEALIGPLGQVK	LTHGDSPSEALIGPLGQVK	2	LTHGDSPSEALIGPLGQVK2	30307.4	26277.4	16546.5
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	LTHGDSPSEALIGPLGQVK	LTHGDSPSEALIGPLGQVK	3	LTHGDSPSEALIGPLGQVK3	349657	338353	375701
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	LTHMSGWMALIPNANHINWYFK	LTHMSGWMALIPNANHINWYFK	4	LTHMSGWMALIPNANHINWYFK4	4946.89	14035.6	5221.95
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	LTHQIQELTLDTPYYFK	LTHQIQELTLDTPYYFK	3	LTHQIQELTLDTPYYFK3	41860.4	34439.3	33140.6
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	LTHSEAYPHFMSILHHCLQMPYK	LTHSEAYPHFMSILHHC(UniMod:4)LQMPYK	4	LTHSEAYPHFMSILHHC(UniMod:4)LQMPYK4	5152.77		
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	LTHSEQVLSDLQLTK	LTHSEQVLSDLQLTK	3	LTHSEQVLSDLQLTK3	33287.6	35028.3	42661.1
D4A9Y0	D4A9Y0	D4A9Y0_RAT	Sdf2l1	Stromal cell-derived factor 2-like 1	1	LTHVLTGK	LTHVLTGK	2	LTHVLTGK2	68599.4	39770.9	51560.3
Q62724	Q62724	MCM6_RAT	Mcm6	DNA replication licensing factor MCM6 (Fragment)	1	LTHYDHVLIELTQAGLK	LTHYDHVLIELTQAGLK	3	LTHYDHVLIELTQAGLK3	12910.5	5688.76	
Q62724	Q62724	MCM6_RAT	Mcm6	DNA replication licensing factor MCM6 (Fragment)	1	LTHYDHVLIELTQAGLK	LTHYDHVLIELTQAGLK	4	LTHYDHVLIELTQAGLK4	2923.11	1640.93	
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	LTHYHEGLPTTR	LTHYHEGLPTTR	2	LTHYHEGLPTTR2	3214.87		
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	LTHYHEGLPTTR	LTHYHEGLPTTR	3	LTHYHEGLPTTR3	46478	33733.3	22359.7
P62703	D3ZX01;P62703	RS4X_RAT	Rps4x	Small ribosomal subunit protein eS4	0	LTIAEER	LTIAEER	2	LTIAEER2	47814.8	44177.8	38352.9
P18395	P18395	CSDE1_RAT	Csde1	Cold shock domain-containing protein E1	1	LTIAFQAK	LTIAFQAK	2	LTIAFQAK2	7324.19		7245.35
A0A0G2K4Y6	A0A0G2K4Y6	A0A0G2K4Y6_RAT	Haus6	Family with sequence similarity 29, member A	1	LTIDLHYLEK	LTIDLHYLEK	3	LTIDLHYLEK3	1168.79	1275.25	
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	LTIHYDNGFSISTEPQDGAFPK	LTIHYDNGFSISTEPQDGAFPK	3	LTIHYDNGFSISTEPQDGAFPK3	13463.5	28667.9	29310.3
B5DF45	B5DF45	TRAF6_RAT	Traf6	TNF receptor-associated factor 6	1	LTILDQSEAVIR	LTILDQSEAVIR	2	LTILDQSEAVIR2	3876.71	4444.21	1741.37
P55161	A0A0G2JUF9;P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	0	LTILNDR	LTILNDR	2	LTILNDR2	277478	362622	311478
A0A8I6AC38	A0A8I6AC38	A0A8I6AC38_RAT	Wnk2	non-specific serine/threonine protein kinase	1	LTILNVCNTGDK	LTILNVC(UniMod:4)NTGDK	2	LTILNVC(UniMod:4)NTGDK2	1715.93	2779.33	
Q63362	A0A8I6AIC3;Q63362	NDUA5_RAT	Ndufa5	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5	0	LTILYTK	LTILYTK	2	LTILYTK2	73954	91785.8	84845.4
Q66H84	Q66H84	MAPK3_RAT	Mapkapk3	MAP kinase-activated protein kinase 3	1	LTIMQFMNHPWINQSMEVPQTPLHTAR	LTIMQFMNHPWINQSMEVPQTPLHTAR	4	LTIMQFMNHPWINQSMEVPQTPLHTAR4	52840.8	52271.7	56188.9
A0A096MK24	A0A096MK24	A0A096MK24_RAT	Morc4	Microrchidia 4	1	LTINALAQK	LTINALAQK	2	LTINALAQK2	8089.86	7169.7	4127.05
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	LTINPYEISGCPK	LTINPYEISGC(UniMod:4)PK	2	LTINPYEISGC(UniMod:4)PK2	18966.4	27139.2	9570.42
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	LTIQGLK	LTIQGLK	2	LTIQGLK2	390722	344403	390779
A0A0G2K1G4	A0A0G2K1G4	A0A0G2K1G4_RAT	Rspry1	Ring finger and SPRY domain containing 1	1	LTISESSISDR	LTISESSISDR	2	LTISESSISDR2	7810.81		8018.16
M0RBD5	A0A8I6GE36;A0A8I5ZLU0;M0RBD5	M0RBD5_RAT	ENSRNOG00000070933	Ig-like domain-containing protein	0	LTISKDTSNNQAFLK	LTISKDTSNNQAFLK	3	LTISKDTSNNQAFLK3	5539.72		4558.48
E9PT66	E9PT66	E9PT66_RAT	Sf3b3	Splicing factor 3b, subunit 3	1	LTISSPLEAHK	LTISSPLEAHK	3	LTISSPLEAHK3	5126.96	1343.48	2683.48
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	LTITSNPEMTFPGER	LTITSNPEMTFPGER	2	LTITSNPEMTFPGER2	18554.4	21076.6	13644.5
B3GNI6	B3GNI6	SEP11_RAT	Septin11	Septin-11	1	LTIVDTVGFGDQINK	LTIVDTVGFGDQINK	2	LTIVDTVGFGDQINK2	35457.4	30746.4	38683.2
B3GNI6	B3GNI6	SEP11_RAT	Septin11	Septin-11	1	LTIVDTVGFGDQINK	LTIVDTVGFGDQINK	3	LTIVDTVGFGDQINK3	4819.76	4241.85	
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LTKDFSALESQLQDTQELLQEENRQK	LTKDFSALESQLQDTQELLQEENRQK	4	LTKDFSALESQLQDTQELLQEENRQK4	13888.4	21487.7	18703.4
Q5M887	Q5M887	TPC13_RAT	Trappc13	Trafficking protein particle complex subunit 13	1	LTKPTLFTNIPVTCEEK	LTKPTLFTNIPVTC(UniMod:4)EEK	3	LTKPTLFTNIPVTC(UniMod:4)EEK3	20585.5	14278.2	20860.5
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	LTKYPLLLDNIAK	LTKYPLLLDNIAK	3	LTKYPLLLDNIAK3	7925.04	10070.6	9597.04
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	LTLADIER	LTLADIER	2	LTLADIER2	145868	146118	138084
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	LTLAELNQVLYR	LTLAELNQVLYR	2	LTLAELNQVLYR2	11602.5	13889.5	12654.9
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	LTLAFSAQTK	LTLAFSAQTK	2	LTLAFSAQTK2	66316.3	83247.1	54656.8
B2GV38	B2GV38	UBL4A_RAT	Ubl4a	Ubiquitin-like protein 4A	1	LTLDDIER	LTLDDIER	2	LTLDDIER2	187562	184632	176688
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	LTLDFNR	LTLDFNR	2	LTLDFNR2	8.45251e+06	7.14672e+06	6.55052e+06
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	LTLDINER	LTLDINER	2	LTLDINER2	14919.3	29914.3	23883.6
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	LTLDLMKPK	LTLDLMKPK	2	LTLDLMKPK2	4916.56	13499.7	10621.4
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	LTLEDQATFIK	LTLEDQATFIK	2	LTLEDQATFIK2	83483.1	51570.2	64167
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	LTLEDQATFIKK	LTLEDQATFIKK	3	LTLEDQATFIKK3	8562.47	12694.5	12220.4
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	LTLEEESDLEK	LTLEEESDLEK	2	LTLEEESDLEK2	7023.6	8315.11	8421.47
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	LTLEELDEIIK	LTLEELDEIIK	2	LTLEELDEIIK2	9358.48	6289.7	5068.99
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	LTLEFSAFDMSAPTPAR	LTLEFSAFDMSAPTPAR	2	LTLEFSAFDMSAPTPAR2	19442.9	13819.2	11292.6
Q80VJ4	Q80VJ4	GPCP1_RAT	Gpcpd1	Glycerophosphocholine phosphodiesterase GPCPD1	1	LTLEGLEEDDDDDDK	LTLEGLEEDDDDDDK	2	LTLEGLEEDDDDDDK2	1457.7	4795.11	
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	LTLEIKQLQLQIDK	LTLEIKQLQLQIDK	3	LTLEIKQLQLQIDK3		4975.34	5447.4
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	LTLELQATGVPPAVALLDFATEPYHAAK	LTLELQATGVPPAVALLDFATEPYHAAK	3	LTLELQATGVPPAVALLDFATEPYHAAK3	6833.37		
A4GW50	A4GW50	A4GW50_RAT	Stk38l	Serine/threonine kinase 38 like	1	LTLENFYSNLILQHEER	LTLENFYSNLILQHEER	3	LTLENFYSNLILQHEER3	3374.46	7289.91	
Q5M872	Q5M872	DPEP2_RAT	Dpep2	Dipeptidase 2	1	LTLEQIDLIR	LTLEQIDLIR	2	LTLEQIDLIR2	9890.28	20546.2	14104.6
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	LTLESLYQAVCER	LTLESLYQAVC(UniMod:4)ER	2	LTLESLYQAVC(UniMod:4)ER2	20927.7	16036.9	10731.3
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	LTLESLYQAVCER	LTLESLYQAVC(UniMod:4)ER	3	LTLESLYQAVC(UniMod:4)ER3	3986.37	9067.6	3250.31
D4A1B2	D4A1B2	D4A1B2_RAT	Arpin	Arpin	1	LTLEVLK	LTLEVLK	2	LTLEVLK2	117288	120586	108962
O08770	O08770	GPV_RAT	Gp5	Platelet glycoprotein V	1	LTLFENPLEELPEVLFGEMAGLR	LTLFENPLEELPEVLFGEMAGLR	3	LTLFENPLEELPEVLFGEMAGLR3		66889.8	65413.5
Q8R5M3	Q8R5M3	LRC15_RAT	Lrrc15	Leucine-rich repeat-containing protein 15	1	LTLFGNSLR	LTLFGNSLR	2	LTLFGNSLR2	7849.13	10957	8072.25
A0A0G2K9K4	A0A0G2K9K4	A0A0G2K9K4_RAT	Tfg	Trafficking from ER to golgi regulator	1	LTLFVNGQPR	LTLFVNGQPR	2	LTLFVNGQPR2	38573.6	34847.8	25485.4
A0A0G2K9K4	A0A0G2K9K4	A0A0G2K9K4_RAT	Tfg	Trafficking from ER to golgi regulator	1	LTLFVNGQPRPLESSQVK	LTLFVNGQPRPLESSQVK	3	LTLFVNGQPRPLESSQVK3	31124.4	20749.4	20925.9
Q9WTS8	Q9WTS8	FCN1_RAT	Fcn1	Ficolin-1	1	LTLGQFLEGTAGDSLTK	LTLGQFLEGTAGDSLTK	2	LTLGQFLEGTAGDSLTK2	30002.8	30494.2	34902.6
Q9WTS8	Q9WTS8	FCN1_RAT	Fcn1	Ficolin-1	1	LTLGQFLEGTAGDSLTK	LTLGQFLEGTAGDSLTK	3	LTLGQFLEGTAGDSLTK3	22959.4	10519	16791.6
Q63413	Q5U216;Q63413	DX39B_RAT	Ddx39b	Spliceosome RNA helicase Ddx39b	0	LTLHGLQQYYVK	LTLHGLQQYYVK	3	LTLHGLQQYYVK3	13248.8		
Q99MI5	Q99MI5;A0A8I6GI39	Q99MI5_RAT	Srm	Spermidine synthase	0	LTLHVGDGFEFMK	LTLHVGDGFEFMK	3	LTLHVGDGFEFMK3	10602.1	4414.1	5376.72
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	LTLIDPETLLPR	LTLIDPETLLPR	2	LTLIDPETLLPR2	419039	507982	429524
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	LTLIDPETLLPR	LTLIDPETLLPR	3	LTLIDPETLLPR3	14078.8	18731.5	17667.3
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	LTLISEDVK	LTLISEDVK	2	LTLISEDVK2	242087	305117	219590
O35547	O35547	ACSL4_RAT	Acsl4	Long-chain-fatty-acid--CoA ligase 4	1	LTLLAQQK	LTLLAQQK	2	LTLLAQQK2	33299.5		25913
B2RYG8	B2RYG8	ELP6_RAT	Elp6	Elongator complex protein 6	1	LTLLCDAK	LTLLC(UniMod:4)DAK	2	LTLLC(UniMod:4)DAK2	21540.5	22110.9	26827.3
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	LTLLNPK	LTLLNPK	2	LTLLNPK2	67773.4	58474.1	50699
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	LTLLPPTTPGDTVPK	LTLLPPTTPGDTVPK	2	LTLLPPTTPGDTVPK2	55527.8	54627.1	61303.2
Q4QQW8	Q4QQW8	PLBL2_RAT	Plbd2	Putative phospholipase B-like 2	1	LTLLQLK	LTLLQLK	2	LTLLQLK2	9608.49	4815.99	6097.44
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	LTLLQVLHK	LTLLQVLHK	2	LTLLQVLHK2	13402.6	8679.57	14174.1
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	LTLLTDPPTAR	LTLLTDPPTAR	2	LTLLTDPPTAR2	21990.9	19652.6	8145.59
Q5XIC4	Q5XIC4	SPG21_RAT	Spg21	Maspardin	1	LTLNCQNSYVEPHK	LTLNC(UniMod:4)QNSYVEPHK	3	LTLNC(UniMod:4)QNSYVEPHK3	8687.41	9005.77	10985.2
Q8R431	Q8R431	MGLL_RAT	Mgll	Monoglyceride lipase	1	LTLPFLLLQGSADR	LTLPFLLLQGSADR	2	LTLPFLLLQGSADR2	27613.6	24742.7	19287.7
Q8R431	Q8R431	MGLL_RAT	Mgll	Monoglyceride lipase	1	LTLPFLLLQGSADR	LTLPFLLLQGSADR	3	LTLPFLLLQGSADR3	3794.12	5825.61	10536.5
Q63483	Q63483	Q63483_RAT	Rab38	Ras-related protein Rab	1	LTLPNGKPVSVVLLANK	LTLPNGKPVSVVLLANK	3	LTLPNGKPVSVVLLANK3	19105.1	25888.5	23339.6
P01015	P01015	ANGT_RAT	Agt	Angiotensinogen	1	LTLPQLEIR	LTLPQLEIR	2	LTLPQLEIR2	748907	674418	658595
Q63481	Q63481	RAB7L_RAT	Rab29	Ras-related protein Rab-7L1	1	LTLPSGEPVPCLLLANK	LTLPSGEPVPC(UniMod:4)LLLANK	2	LTLPSGEPVPC(UniMod:4)LLLANK2	10084.6	10557	13170
Q63481	Q63481	RAB7L_RAT	Rab29	Ras-related protein Rab-7L1	1	LTLPSGEPVPCLLLANK	LTLPSGEPVPC(UniMod:4)LLLANK	3	LTLPSGEPVPC(UniMod:4)LLLANK3	9344.02	7551.4	6491.37
Q10473	Q10473	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	1	LTLQHVNSNQCLDK	LTLQHVNSNQC(UniMod:4)LDK	2	LTLQHVNSNQC(UniMod:4)LDK2	4631.43	5662.55	3289.48
Q10473	Q10473	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	1	LTLQHVNSNQCLDK	LTLQHVNSNQC(UniMod:4)LDK	3	LTLQHVNSNQC(UniMod:4)LDK3	156448	162471	193934
P37397	P37397	CNN3_RAT	Cnn3	Calponin-3	1	LTLQPVDNSTISLQMGTNK	LTLQPVDNSTISLQMGTNK	3	LTLQPVDNSTISLQMGTNK3	6497.63		
P13264	P13264	GLSK_RAT	Gls	Glutaminase kidney isoform, mitochondrial	1	LTLQTTSDGVMLDKDLFKK	LTLQTTSDGVMLDKDLFKK	4	LTLQTTSDGVMLDKDLFKK4	7105.52		9323.25
Q9Z2L0	A0A8I5ZUF9;Q9Z2L0	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	0	LTLSALLDGK	LTLSALLDGK	2	LTLSALLDGK2	844358	717996	769759
Q9R1Z0	Q9R1Z0;P81155	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	0	LTLSALVDGK	LTLSALVDGK	2	LTLSALVDGK2	1.58776e+06	1.12594e+06	1.36852e+06
B0BNJ4	B0BNJ4	B0BNJ4_RAT	Ethe1	ETHE1, persulfide dioxygenase	1	LTLSCEEFIK	LTLSC(UniMod:4)EEFIK	2	LTLSC(UniMod:4)EEFIK2	22276.6	22148	21975.1
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	LTLSDFLIK	LTLSDFLIK	2	LTLSDFLIK2	30421.6	29815.2	35946.4
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	LTLSDFLIKPIQR	LTLSDFLIKPIQR	2	LTLSDFLIKPIQR2	12210.8	8258.87	7288.73
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	LTLSDFLIKPIQR	LTLSDFLIKPIQR	3	LTLSDFLIKPIQR3	107073	101604	102415
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	LTLSFAPR	LTLSFAPR	2	LTLSFAPR2	21539.9	13888.5	19316
G3V8D0	G3V8D0	G3V8D0_RAT	St8sia3	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	1	LTLSHCA	LTLSHC(UniMod:4)A	2	LTLSHC(UniMod:4)A2	4367.2	3244.02	
Q66HC5	Q66HC5	NUP93_RAT	Nup93	Nuclear pore complex protein Nup93	1	LTLSQFQK	LTLSQFQK	2	LTLSQFQK2	29094.5	18421.6	14841.7
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	LTLTEER	LTLTEER	2	LTLTEER2	43127.2	65063.3	58232.1
P35435	P35435	ATPG_RAT	Atp5f1c	ATP synthase subunit gamma, mitochondrial	1	LTLTFNR	LTLTFNR	2	LTLTFNR2	467787	446889	460147
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	LTLTPWVGLR	LTLTPWVGLR	2	LTLTPWVGLR2	8331.59	58958.3	25212.9
A0A8I5ZKS4	A0A8I5ZKS4	A0A8I5ZKS4_RAT	Hycc1	Family with sequence similarity 126, member A	1	LTLTSSQSLPK	LTLTSSQSLPK	2	LTLTSSQSLPK2	3979.87	7485.06	2404.24
Q5XI73	Q5XI73	GDIR1_RAT	Arhgdia	Rho GDP-dissociation inhibitor 1	1	LTLVCSTAPGPLELDLTGDLESFK	LTLVC(UniMod:4)STAPGPLELDLTGDLESFK	3	LTLVC(UniMod:4)STAPGPLELDLTGDLESFK3	5581.54		3768.58
Q5XI73	Q5XI73	GDIR1_RAT	Arhgdia	Rho GDP-dissociation inhibitor 1	1	LTLVCSTAPGPLELDLTGDLESFKK	LTLVC(UniMod:4)STAPGPLELDLTGDLESFKK	3	LTLVC(UniMod:4)STAPGPLELDLTGDLESFKK3	178508	185512	142980
Q5XI73	Q5XI73	GDIR1_RAT	Arhgdia	Rho GDP-dissociation inhibitor 1	1	LTLVCSTAPGPLELDLTGDLESFKK	LTLVC(UniMod:4)STAPGPLELDLTGDLESFKK	4	LTLVC(UniMod:4)STAPGPLELDLTGDLESFKK4	19185	20381.3	
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	LTLYDIAHTPGVAADLSHIETR	LTLYDIAHTPGVAADLSHIETR	3	LTLYDIAHTPGVAADLSHIETR3	69888.8	54628.6	81080.2
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	LTLYDIAHTPGVAADLSHIETR	LTLYDIAHTPGVAADLSHIETR	4	LTLYDIAHTPGVAADLSHIETR4	283911	274840	324185
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	LTMAFLNGALDGALLGAHLSR	LTMAFLNGALDGALLGAHLSR	3	LTMAFLNGALDGALLGAHLSR3	19142.1	23934.3	26316.9
Q5HZV9	Q5HZV9	PP1R7_RAT	Ppp1r7	Protein phosphatase 1 regulatory subunit 7	1	LTMLDIASNR	LTMLDIASNR	2	LTMLDIASNR2	249399	263476	225116
O35964	O35964	SH3G1_RAT	Sh3gl1	Endophilin-A2	1	LTMLNTVSK	LTMLNTVSK	2	LTMLNTVSK2	193611	202706	212456
Q04807	Q04807	GLCM1_RAT	Glycam1	Glycosylation-dependent cell adhesion molecule 1	1	LTMLSQAVQK	LTMLSQAVQK	2	LTMLSQAVQK2	2.20655e+06	2.20925e+06	2.43925e+06
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	LTMQVTTLNENLGTVK	LTMQVTTLNENLGTVK	2	LTMQVTTLNENLGTVK2	16921.4	12066.4	15119.2
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	LTMYGNPATSQPVTSSNHSSR	LTMYGNPATSQPVTSSNHSSR	3	LTMYGNPATSQPVTSSNHSSR3	399177	423471	385165
Q9R1J8	Q9R1J8	P3H1_RAT	P3h1	Prolyl 3-hydroxylase 1	1	LTNAAATSGDGYR	LTNAAATSGDGYR	2	LTNAAATSGDGYR2	5634.4	2995.7	1864.96
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	LTNENMEITSALQSEQHVK	LTNENMEITSALQSEQHVK	3	LTNENMEITSALQSEQHVK3	15530.4	25334.4	25359.8
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	LTNFPEMMNR	LTNFPEMMNR	2	LTNFPEMMNR2	155867	144909	156539
P62944	A0A8I5ZZX8;P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	LTNGIWILAELR	LTNGIWILAELR	2	LTNGIWILAELR2	15429.2	9921.58	11190.1
P52303	P52303	AP1B1_RAT	Ap1b1	AP-1 complex subunit beta-1	1	LTNGIWVLAELR	LTNGIWVLAELR	2	LTNGIWVLAELR2	42961.1	35640.2	40794.9
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	LTNHEFTYQK	LTNHEFTYQK	2	LTNHEFTYQK2	35286.1	27753.7	27392.5
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	LTNHEFTYQK	LTNHEFTYQK	3	LTNHEFTYQK3	652885	739531	760866
Q9QYF3	Q9QYF3	MYO5A_RAT	Myo5a	Unconventional myosin-Va	1	LTNLEGVYNSETEK	LTNLEGVYNSETEK	2	LTNLEGVYNSETEK2	4784.48		5036.7
Q501W1	Q501W1	Q501W1_RAT	Txk	Tyrosine-protein kinase	1	LTNLETYEWYHK	LTNLETYEWYHK	3	LTNLETYEWYHK3	2085.4	2620.44	2532.31
Q5BK48	Q5BK48	TTC5_RAT	Ttc5	Tetratricopeptide repeat protein 5	1	LTNLLASK	LTNLLASK	2	LTNLLASK2	4711.77		6749.25
D3ZWS0	D3ZWS0	D3ZWS0_RAT	Scrib	Scribble planar cell polarity protein	1	LTNLNVDR	LTNLNVDR	2	LTNLNVDR2	3457.33	1673.94	2444.86
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	LTNQNDELEEK	LTNQNDELEEK	2	LTNQNDELEEK2		3634.89	3432.53
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	LTNQTMGFSFAVEQDIPVK	LTNQTMGFSFAVEQDIPVK	3	LTNQTMGFSFAVEQDIPVK3	127732	80333.5	108059
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	LTNSEGEDFCAGVLLQENFVLTTAK	LTNSEGEDFC(UniMod:4)AGVLLQENFVLTTAK	3	LTNSEGEDFC(UniMod:4)AGVLLQENFVLTTAK3	397704	391671	406932
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	LTNSEGEDFCAGVLLQENFVLTTAK	LTNSEGEDFC(UniMod:4)AGVLLQENFVLTTAK	4	LTNSEGEDFC(UniMod:4)AGVLLQENFVLTTAK4	3702.48	2479.57	1569.49
P24050	P24050	RS5_RAT	Rps5	Small ribosomal subunit protein uS7	1	LTNSMMMHGR	LTNSMMMHGR	3	LTNSMMMHGR3	22890.4	12812.4	18790.3
Q4V8E4	Q4V8E4	CFA36_RAT	Cfap36	Cilia- and flagella-associated protein 36	1	LTNSQGDGEHFVQPSSEVK	LTNSQGDGEHFVQPSSEVK	3	LTNSQGDGEHFVQPSSEVK3			8588.22
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	LTNSQTSLCEILQEK	LTNSQTSLC(UniMod:4)EILQEK	2	LTNSQTSLC(UniMod:4)EILQEK2	3647.05		
Q64165	Q64165	Q64165_RAT	Gcnt1	Glucosaminyl (N-acetyl) transferase 1	1	LTNTGVVK	LTNTGVVK	2	LTNTGVVK2	40211.7	43086.3	46383.5
A0A0G2K098	A0A0G2K098	A0A0G2K098_RAT	Mcc	MCC regulator of WNT signaling pathway	1	LTPANRPINPSTGELSTSSSSNDIPIAK	LTPANRPINPSTGELSTSSSSNDIPIAK	3	LTPANRPINPSTGELSTSSSSNDIPIAK3	3029.21	4379.7	
D3Z9I1	D3Z9I1	D3Z9I1_RAT	Coa3	Cytochrome c oxidase assembly factor 3	1	LTPAQLQFMR	LTPAQLQFMR	2	LTPAQLQFMR2	62344.2	59815.6	58997.9
D3ZCG1	D3ZCG1	D3ZCG1_RAT	Dipk2b	Divergent protein kinase domain 2B	1	LTPDLVQGLPSPFLHCPSQR	LTPDLVQGLPSPFLHC(UniMod:4)PSQR	3	LTPDLVQGLPSPFLHC(UniMod:4)PSQR3	22794.1	9520.04	12014.4
A0A8I6A5Y0	A0A8I6A5Y0	A0A8I6A5Y0_RAT	Vta1	Vesicle trafficking 1	1	LTPEDFAR	LTPEDFAR	2	LTPEDFAR2	91578.9	58360.7	80560.6
P62243	Q6TXJ0;D3ZIE1;P62243;M0R7Q5	RS8_RAT	Rps8	Small ribosomal subunit protein eS8	0	LTPEEEEILNK	LTPEEEEILNK	2	LTPEEEEILNK2	102408	114196	69924.4
P62243	Q6TXJ0;D3ZIE1;P62243;M0R7Q5	RS8_RAT	Rps8	Small ribosomal subunit protein eS8	0	LTPEEEEILNKK	LTPEEEEILNKK	3	LTPEEEEILNKK3	34007	47310	60797.6
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	LTPEEIER	LTPEEIER	2	LTPEEIER2	7.07354e+06	7.07407e+06	7.6168e+06
Q9QX69	Q9QX69	LANC1_RAT	Lancl1	Glutathione S-transferase LANCL1	1	LTPEFSHR	LTPEFSHR	2	LTPEFSHR2	8990.3	3314.77	2728.6
D4ACD2	D4ACD2	D4ACD2_RAT	Bach1	BTB domain and CNC homolog 1	1	LTPEQLDCIHDIR	LTPEQLDC(UniMod:4)IHDIR	3	LTPEQLDC(UniMod:4)IHDIR3	9488.38	9112.62	6029.01
B1WBY7	B1WBY7	B1WBY7_RAT	Erlin1	Erlin	1	LTPEYLELK	LTPEYLELK	2	LTPEYLELK2	41293.3	46621.6	42811
B1WBY7	B1WBY7	B1WBY7_RAT	Erlin1	Erlin	1	LTPEYLELKK	LTPEYLELKK	3	LTPEYLELKK3	21820.7	25373	13944.7
B5DEH2	B5DEH2	ERLN2_RAT	Erlin2	Erlin-2	1	LTPEYLQLMK	LTPEYLQLMK	2	LTPEYLQLMK2	210107	193796	204813
P04638	P04638	APOA2_RAT	Apoa2	Apolipoprotein A-II	1	LTPFVQR	LTPFVQR	2	LTPFVQR2	1.85137e+07	2.66524e+07	2.17493e+07
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	LTPGCEAEAEAEAICFFIK	LTPGC(UniMod:4)EAEAEAEAIC(UniMod:4)FFIK	3	LTPGC(UniMod:4)EAEAEAEAIC(UniMod:4)FFIK3	8475.79	20049.3	23328.1
A0A8I5ZVT2	A0A8I5ZVT2	A0A8I5ZVT2_RAT	Fndc3a	Fibronectin type III domain containing 3a	1	LTPGCYYR	LTPGC(UniMod:4)YYR	2	LTPGC(UniMod:4)YYR2	19996.8	19586.9	24199.9
D4AE71	D4AE71	D4AE71_RAT	Cspg4b	Chondroitin sulfate proteoglycan 4B	1	LTPGLMQVLDPDTDAQHLR	LTPGLMQVLDPDTDAQHLR	3	LTPGLMQVLDPDTDAQHLR3	2663.37	2944.8	7361.38
F1M4J1	F1M4J1	F1M4J1_RAT	LOC100294508	Dyslexia susceptibility 2-like	1	LTPGLYEFK	LTPGLYEFK	2	LTPGLYEFK2	37855.9	33588	30925.1
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	LTPGVEYHVSVIAMK	LTPGVEYHVSVIAMK	2	LTPGVEYHVSVIAMK2	130764	123256	111038
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	LTPGVEYHVSVIAMK	LTPGVEYHVSVIAMK	3	LTPGVEYHVSVIAMK3	429210	472454	429527
P28073	P28073;A0A0G2JSL0	PSB6_RAT	Psmb6	Proteasome subunit beta type-6	0	LTPIHDHIFCCR	LTPIHDHIFC(UniMod:4)C(UniMod:4)R	2	LTPIHDHIFC(UniMod:4)C(UniMod:4)R2	138528	129627	117244
P28073	P28073;A0A0G2JSL0	PSB6_RAT	Psmb6	Proteasome subunit beta type-6	0	LTPIHDHIFCCR	LTPIHDHIFC(UniMod:4)C(UniMod:4)R	3	LTPIHDHIFC(UniMod:4)C(UniMod:4)R3	705269	551836	657762
P28073	P28073;A0A0G2JSL0	PSB6_RAT	Psmb6	Proteasome subunit beta type-6	0	LTPIHDHIFCCR	LTPIHDHIFC(UniMod:4)C(UniMod:4)R	4	LTPIHDHIFC(UniMod:4)C(UniMod:4)R4	1.44504e+06	1.60857e+06	1.60154e+06
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	LTPILCDGTTTFVDLVPGFR	LTPILC(UniMod:4)DGTTTFVDLVPGFR	3	LTPILC(UniMod:4)DGTTTFVDLVPGFR3	3806.51	8434.09	10499.2
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	LTPIPSISAHLQAYLQGNTQVSR	LTPIPSISAHLQAYLQGNTQVSR	3	LTPIPSISAHLQAYLQGNTQVSR3	117684	114500	106212
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	LTPITIFMEYR	LTPITIFMEYR	2	LTPITIFMEYR2	218951	239767	247900
Q6RUV5	Q6RUV5	RAC1_RAT	Rac1	Ras-related C3 botulinum toxin substrate 1	1	LTPITYPQGLAMAK	LTPITYPQGLAMAK	2	LTPITYPQGLAMAK2	2.09535e+06	1.82002e+06	2.15122e+06
Q6RUV5	Q6RUV5	RAC1_RAT	Rac1	Ras-related C3 botulinum toxin substrate 1	1	LTPITYPQGLAMAK	LTPITYPQGLAMAK	3	LTPITYPQGLAMAK3	73443.1	62910.2	67558.8
P18266	P18266	GSK3B_RAT	Gsk3b	Glycogen synthase kinase-3 beta	1	LTPLEACAHSFFDELRDPNVK	LTPLEAC(UniMod:4)AHSFFDELRDPNVK	4	LTPLEAC(UniMod:4)AHSFFDELRDPNVK4	16950.6	13912.2	18578.9
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	LTPLEALLQTR	LTPLEALLQTR	2	LTPLEALLQTR2	12273	18537.1	21929.8
A0A8I6AD03	A0A8I6AD03	A0A8I6AD03_RAT	Aplp1	Amyloid beta precursor like protein 1	1	LTPLEQYEQK	LTPLEQYEQK	2	LTPLEQYEQK2	100558	86285.5	85869.1
D3ZHW0	D3ZHW0	D3ZHW0_RAT	Dhx29	ATP-dependent RNA helicase DHX29	1	LTPLGQHLAALPVNVK	LTPLGQHLAALPVNVK	3	LTPLGQHLAALPVNVK3	8590.52	2901.88	2982.38
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	LTPLHLAVQAGSEIIVR	LTPLHLAVQAGSEIIVR	3	LTPLHLAVQAGSEIIVR3	10175.1	15287.3	5207.95
C9WPN6	C9WPN6	IF2H_RAT	Eif2s3y	Eukaryotic translation initiation factor 2 subunit 3, Y-linked	1	LTPLSHEIISR	LTPLSHEIISR	3	LTPLSHEIISR3	53494.5	42899.2	73196.1
P81795	P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	1	LTPLSHEVISR	LTPLSHEVISR	2	LTPLSHEVISR2	48820.3	35322.9	25621.7
P81795	P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	1	LTPLSHEVISR	LTPLSHEVISR	3	LTPLSHEVISR3	335634	351167	355773
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	LTPPVLEEMGHCDSVYLSEVGDTQVVVFK	LTPPVLEEMGHC(UniMod:4)DSVYLSEVGDTQVVVFK	4	LTPPVLEEMGHC(UniMod:4)DSVYLSEVGDTQVVVFK4	9939.24	8143.46	13881.9
D4AE80	D4AE80	D4AE80_RAT	Dcp1a	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	LTPQHDQIQAQPLGK	LTPQHDQIQAQPLGK	3	LTPQHDQIQAQPLGK3	36099.5	23623	17958.1
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	LTPQMFNQLMK	LTPQMFNQLMK	2	LTPQMFNQLMK2	27009	11162.3	22869.8
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	LTPQMFQQLMK	LTPQMFQQLMK	2	LTPQMFQQLMK2	151158	162465	138544
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	LTPSGSISVIK	LTPSGSISVIK	2	LTPSGSISVIK2	65135.6	76093.3	68485.3
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	LTPSKPFTGCIR	LTPSKPFTGC(UniMod:4)IR	3	LTPSKPFTGC(UniMod:4)IR3	58886.2	44248.1	57530.1
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	LTPSLEAGLQR	LTPSLEAGLQR	2	LTPSLEAGLQR2	50891	46264.3	54844.6
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	LTPSQVK	LTPSQVK	2	LTPSQVK2	94878.1	90634.1	69810.9
P17220	P17220;A0A8I6AGN7	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	0	LTPTEVR	LTPTEVR	2	LTPTEVR2	4.97671e+06	5.06535e+06	5.97482e+06
P17220	P17220	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	1	LTPTEVRDYLAAIA	LTPTEVRDYLAAIA	2	LTPTEVRDYLAAIA2	20965.8	18064.9	14845.6
D4A3X7	D4A3X7	D4A3X7_RAT	Snx33	Sorting nexin	1	LTPTHAGSPVYR	LTPTHAGSPVYR	3	LTPTHAGSPVYR3	18683.8	23439.8	18350.8
Q00972	Q00972	BCKD_RAT	Bckdk	[3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial	1	LTPTMMLYSGR	LTPTMMLYSGR	2	LTPTMMLYSGR2	5868.51	4947.4	4714.79
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	LTPTNGEMR	LTPTNGEMR	2	LTPTNGEMR2	153958	160656	128771
O08623	O08623	SQSTM_RAT	Sqstm1	Sequestosome-1	1	LTPTSAESSSTGTEDK	LTPTSAESSSTGTEDK	2	LTPTSAESSSTGTEDK2	102118	97716	103157
A0A8I6AXD4	A0A8I6AXD4	A0A8I6AXD4_RAT	Usp6nl	USP6 N-terminal like	1	LTPVLPSSR	LTPVLPSSR	2	LTPVLPSSR2		1538.1	
A0A8I6A5H5	A0A8I6A5H5	A0A8I6A5H5_RAT	Rela	RELA proto-oncogene, NF-kB subunit	1	LTPVLSHPIFDNR	LTPVLSHPIFDNR	3	LTPVLSHPIFDNR3	64398.2	50223.5	54364.3
Q6P7D4	Q6P7D4	CP20A_RAT	Cyp20a1	Cytochrome P450 20A1	1	LTPVSAQLQDIEGK	LTPVSAQLQDIEGK	2	LTPVSAQLQDIEGK2	24510.2	23721.8	23945.1
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	LTPVVLAK	LTPVVLAK	2	LTPVVLAK2	847721	910954	836249
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LTPWKPYILTVPSYR	LTPWKPYILTVPSYR	2	LTPWKPYILTVPSYR2	7.17225e+06	7.75448e+06	7.11787e+06
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LTPWKPYILTVPSYR	LTPWKPYILTVPSYR	3	LTPWKPYILTVPSYR3	3.4676e+07	3.66238e+07	3.55762e+07
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LTPWKPYILTVPSYR	LTPWKPYILTVPSYR	4	LTPWKPYILTVPSYR4	104186	130635	133132
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	LTPWKPYILTVPSYREEIQLDIQAR	LTPWKPYILTVPSYREEIQLDIQAR	4	LTPWKPYILTVPSYREEIQLDIQAR4	1.42859e+06	1.8725e+06	1.63489e+06
P08649	P08649	CO4_RAT	C4	Complement C4	1	LTPWKPYILTVPSYREEIQLDVQAR	LTPWKPYILTVPSYREEIQLDVQAR	4	LTPWKPYILTVPSYREEIQLDVQAR4	6.66869e+06	8.1283e+06	7.80141e+06
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	LTPYLEDVSGGMWPVVHIQK	LTPYLEDVSGGMWPVVHIQK	3	LTPYLEDVSGGMWPVVHIQK3	15227.6	8798.14	14005.4
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	LTQACMEGHDFHEGVR	LTQAC(UniMod:4)MEGHDFHEGVR	3	LTQAC(UniMod:4)MEGHDFHEGVR3	13224.3	7517.37	13241.6
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	LTQACMEGHDFHEGVR	LTQAC(UniMod:4)MEGHDFHEGVR	4	LTQAC(UniMod:4)MEGHDFHEGVR4	13573.5	8047.48	21671.4
F6Q5K7	F6Q5K7	F6Q5K7_RAT	Mrps18b	28S ribosomal protein S18b, mitochondrial	1	LTQAIQK	LTQAIQK	2	LTQAIQK2	9450.48	13277.8	
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	LTQDEIISK	LTQDEIISK	2	LTQDEIISK2	148795	178932	172779
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	LTQDQDVDVK	LTQDQDVDVK	2	LTQDQDVDVK2	507129	495290	471824
A0A8I6ATH0	A0A8I6ATH0	A0A8I6ATH0_RAT	Braf	non-specific serine/threonine protein kinase	1	LTQEHIEALLDK	LTQEHIEALLDK	2	LTQEHIEALLDK2	3737.61	1413.51	993
A0A8I6ATH0	A0A8I6ATH0	A0A8I6ATH0_RAT	Braf	non-specific serine/threonine protein kinase	1	LTQEHIEALLDK	LTQEHIEALLDK	3	LTQEHIEALLDK3	38912.5	41553.5	44484
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	LTQELEILTDR	LTQELEILTDR	2	LTQELEILTDR2	153491	159632	150582
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	LTQELEILTDR	LTQELEILTDR	3	LTQELEILTDR3	1495.45	3562.38	2713.86
P08082	P08082	CLCB_RAT	Cltb	Clathrin light chain B	1	LTQEPESIR	LTQEPESIR	2	LTQEPESIR2	28878.1	13193.8	39341.7
P08082	P08082	CLCB_RAT	Cltb	Clathrin light chain B	1	LTQEPESIRK	LTQEPESIRK	2	LTQEPESIRK2	22665.1	14905.4	18384.1
P08082	P08082	CLCB_RAT	Cltb	Clathrin light chain B	1	LTQEPESIRK	LTQEPESIRK	3	LTQEPESIRK3	132670	142546	119397
Q5U2V8	Q5U2V8	EMC3_RAT	Emc3	ER membrane protein complex subunit 3	1	LTQEQVSDSQVLIR	LTQEQVSDSQVLIR	2	LTQEQVSDSQVLIR2	26383.3	28325.4	28952.1
Q5BQE6	Q5BQE6	DHC24_RAT	Dhcr24	Delta(24)-sterol reductase	1	LTQGETLR	LTQGETLR	2	LTQGETLR2	32605.3	35989	21833.4
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	LTQGEVYK	LTQGEVYK	2	LTQGEVYK2	69216.2	76973.5	68810.5
P30427	P30427	PLEC_RAT	Plec	Plectin	1	LTQGHTTVAELTQR	LTQGHTTVAELTQR	3	LTQGHTTVAELTQR3	4817.47	5532.25	5413.77
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	LTQIIQQK	LTQIIQQK	2	LTQIIQQK2	17057	13929.4	10462.6
G3V6K6	G3V6K6	G3V6K6_RAT	Egfr	Receptor protein-tyrosine kinase	1	LTQLGTFEDHFLSLQR	LTQLGTFEDHFLSLQR	3	LTQLGTFEDHFLSLQR3	28264.1	21686	18322
F1LTX4	F1LTX4	F1LTX4_RAT	Lrrn4	Leucine rich repeat neuronal 4	1	LTQLGVWDSHDR	LTQLGVWDSHDR	2	LTQLGVWDSHDR2	3341.48	3165.97	
F1LTX4	F1LTX4	F1LTX4_RAT	Lrrn4	Leucine rich repeat neuronal 4	1	LTQLGVWDSHDR	LTQLGVWDSHDR	3	LTQLGVWDSHDR3	7372.34	7919.26	8344.58
G3V6R4	G3V6R4	G3V6R4_RAT	Lrrc1	Leucine rich repeat containing 1	1	LTQLPEAIGDCENLTELVLTENR	LTQLPEAIGDC(UniMod:4)ENLTELVLTENR	3	LTQLPEAIGDC(UniMod:4)ENLTELVLTENR3	1200.21	2250.2	
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	LTQLYEQAR	LTQLYEQAR	2	LTQLYEQAR2	897429	799099	1.01912e+06
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	LTQPQAFDYNEIPNFPQSTVQGHAGR	LTQPQAFDYNEIPNFPQSTVQGHAGR	3	LTQPQAFDYNEIPNFPQSTVQGHAGR3	54493.7	55501.1	64173.9
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	LTQPQAFDYNEIPNFPQSTVQGHAGR	LTQPQAFDYNEIPNFPQSTVQGHAGR	4	LTQPQAFDYNEIPNFPQSTVQGHAGR4	19931.6	7366.12	15529.8
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	LTQQYNELLHSLQSK	LTQQYNELLHSLQSK	2	LTQQYNELLHSLQSK2	1.30609e+06	1.26087e+06	1.20821e+06
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	LTQQYNELLHSLQSK	LTQQYNELLHSLQSK	3	LTQQYNELLHSLQSK3	28417.6	27400.4	25606.4
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	LTQSEEIK	LTQSEEIK	2	LTQSEEIK2	156207	157376	145930
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	LTQSEEIKDIHIQTMDLVSQETGEK	LTQSEEIKDIHIQTMDLVSQETGEK	4	LTQSEEIKDIHIQTMDLVSQETGEK4	37797.2	39949.8	28912.9
P08649	P08649	CO4_RAT	C4	Complement C4	1	LTQTKENLSCPK	LTQTKENLSC(UniMod:4)PK	3	LTQTKENLSC(UniMod:4)PK3	6485.61	6692.04	
A0A8J8XL70	A0A8J8XL70	A0A8J8XL70_RAT	Serpinf1	Serpin family F member 1	1	LTQVEHR	LTQVEHR	2	LTQVEHR2			311070
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	LTQYDIVIK	LTQYDIVIK	2	LTQYDIVIK2	405323	400471	290899
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	LTQYDIVIKVRPK	LTQYDIVIKVRPK	3	LTQYDIVIKVRPK3	17227.6	5637.53	8490.93
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	LTQYDIVIKVRPK	LTQYDIVIKVRPK	4	LTQYDIVIKVRPK4	13274.6	21052.1	6355.12
P11730	P08413;P11730	KCC2G_RAT	Camk2g	Calcium/calmodulin-dependent protein kinase type II subunit gamma	0	LTQYIDGQGR	LTQYIDGQGR	2	LTQYIDGQGR2	10631.6	6030.65	13924.8
P11730	P08413;P11730	KCC2G_RAT	Camk2g	Calcium/calmodulin-dependent protein kinase type II subunit gamma	0	LTQYIDGQGRPR	LTQYIDGQGRPR	3	LTQYIDGQGRPR3	90812.2	102356	106450
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	LTRDDFLGQVDVPLYPLPTENPR	LTRDDFLGQVDVPLYPLPTENPR	3	LTRDDFLGQVDVPLYPLPTENPR3	14885	13361.8	12630.8
Q7TP54	Q7TP54	RIPR2_RAT	Ripor2	Rho family-interacting cell polarization regulator 2	1	LTSAEGPITTNK	LTSAEGPITTNK	2	LTSAEGPITTNK2	4912.51	1482.57	3126.43
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	LTSAIAK	LTSAIAK	1	LTSAIAK1	5010.56	3393.2	1487.59
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	LTSAMTR	LTSAMTR	2	LTSAMTR2	59671.7	52706.1	47340.6
Q4V884	Q4V884	Q4V884_RAT	Cdc16	CDC16 cell division cycle 16 homolog (S. cerevisiae)	1	LTSAVMEK	LTSAVMEK	2	LTSAVMEK2	9932.29	8816.61	9513.48
Q62991	Q62991	SCFD1_RAT	Scfd1	Sec1 family domain-containing protein 1	1	LTSAVSSLPELLEK	LTSAVSSLPELLEK	2	LTSAVSSLPELLEK2	58063.6	49102.7	61344.6
F1LYM5	F1LYM5	F1LYM5_RAT	ENSRNOG00000070949	Ig-like domain-containing protein	1	LTSDDSVVYYCAR	LTSDDSVVYYC(UniMod:4)AR	2	LTSDDSVVYYC(UniMod:4)AR2	92385.9	84728.3	97451.9
F1LYM5	F1LYM5	F1LYM5_RAT	ENSRNOG00000070949	Ig-like domain-containing protein	1	LTSDDSVVYYCAR	LTSDDSVVYYC(UniMod:4)AR	3	LTSDDSVVYYC(UniMod:4)AR3	29231.9	33633.8	30041.4
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	LTSDKPCCEAGDAVYYTASYAK	LTSDKPC(UniMod:4)C(UniMod:4)EAGDAVYYTASYAK	3	LTSDKPC(UniMod:4)C(UniMod:4)EAGDAVYYTASYAK3	9759.44	13362.3	10073.9
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	LTSDLGR	LTSDLGR	2	LTSDLGR2	87328.5	89081.3	88432.9
D3ZZL9	D3ZZL9	GCC2_RAT	Gcc2	GRIP and coiled-coil domain-containing protein 2	1	LTSDNEDLLAR	LTSDNEDLLAR	2	LTSDNEDLLAR2	4620.19	2691.98	4921.36
D3ZF11	D3ZF11	D3ZF11_RAT	Lamtor5	Ragulator complex protein LAMTOR5	1	LTSDPTDIPVVCLESDNGNVMIQK	LTSDPTDIPVVC(UniMod:4)LESDNGNVMIQK	3	LTSDPTDIPVVC(UniMod:4)LESDNGNVMIQK3	6370.43	2783.23	
P03994	P03994	HPLN1_RAT	Hapln1	Hyaluronan and proteoglycan link protein 1	1	LTSDYLR	LTSDYLR	2	LTSDYLR2	24626.4	28801.1	28293.8
D3ZC54	D3ZC54	D3ZC54_RAT	AABR07065823.2	Ig-like domain-containing protein	1	LTSEDSAIYYCTR	LTSEDSAIYYC(UniMod:4)TR	2	LTSEDSAIYYC(UniMod:4)TR2	201832	180495	189219
D3ZC54	D3ZC54	D3ZC54_RAT	AABR07065823.2	Ig-like domain-containing protein	1	LTSEDSAIYYCTR	LTSEDSAIYYC(UniMod:4)TR	3	LTSEDSAIYYC(UniMod:4)TR3	68532.8	76737.5	72998.9
A0A8I6AIU4	A0A8I6AIU4	A0A8I6AIU4_RAT	ENSRNOG00000067551	Ig-like domain-containing protein	1	LTSEDSATYYCTR	LTSEDSATYYC(UniMod:4)TR	2	LTSEDSATYYC(UniMod:4)TR2	67067	56733.4	52913.9
A0A8I6AIU4	A0A8I6AIU4	A0A8I6AIU4_RAT	ENSRNOG00000067551	Ig-like domain-containing protein	1	LTSEDSATYYCTR	LTSEDSATYYC(UniMod:4)TR	3	LTSEDSATYYC(UniMod:4)TR3	8692.16	4818.36	7583.37
A0A8I6AI27;A0A8I6AJQ0	A0A8I6AI27;A0A8I6AJQ0;A0A8I6G2R9;A0A8I6AP43	A0A8I6AI27_RAT;A0A8I6AJQ0_RAT	ENSRNOG00000063171;ENSRNOG00000065115	Ig-like domain-containing protein	0	LTSEDSAVYYCAR	LTSEDSAVYYC(UniMod:4)AR	2	LTSEDSAVYYC(UniMod:4)AR2	15233.7	17692.3	8920.02
A0A8I6AI27;A0A8I6AJQ0	A0A8I6AI27;A0A8I6AJQ0;A0A8I6G2R9;A0A8I6AP43	A0A8I6AI27_RAT;A0A8I6AJQ0_RAT	ENSRNOG00000063171;ENSRNOG00000065115	Ig-like domain-containing protein	0	LTSEDSAVYYCAR	LTSEDSAVYYC(UniMod:4)AR	3	LTSEDSAVYYC(UniMod:4)AR3		2996.46	
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	LTSEEIEAK	LTSEEIEAK	2	LTSEEIEAK2	8674.98	15196.2	12566.3
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	LTSELDK	LTSELDK	2	LTSELDK2	63445.5	61137	64062
P53817	P53817	PLAT3_RAT	Plaat3	Phospholipase A and acyltransferase 3	1	LTSENCEHFVNELR	LTSENC(UniMod:4)EHFVNELR	3	LTSENC(UniMod:4)EHFVNELR3	9531.26	7311.24	7170.55
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	LTSEPQPQR	LTSEPQPQR	2	LTSEPQPQR2		30399.9	53099.8
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	LTSEVHMR	LTSEVHMR	2	LTSEVHMR2	11325	8429.37	17313.7
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	LTSFITVFK	LTSFITVFK	2	LTSFITVFK2			14056.9
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LTSFMENYR	LTSFMENYR	2	LTSFMENYR2	4.39755e+06	4.93215e+06	5.06074e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LTSFMENYR	LTSFMENYR	3	LTSFMENYR3	2812	2666.67	6527.79
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	LTSGLTASPR	LTSGLTASPR	2	LTSGLTASPR2	136945	116436	109838
P05508	P05508	NU4M_RAT	Mtnd4	NADH-ubiquinone oxidoreductase chain 4	1	LTSHMNNLQPSHTR	LTSHMNNLQPSHTR	3	LTSHMNNLQPSHTR3	15642.2	17873.4	12775.6
P05508	P05508	NU4M_RAT	Mtnd4	NADH-ubiquinone oxidoreductase chain 4	1	LTSHMNNLQPSHTR	LTSHMNNLQPSHTR	4	LTSHMNNLQPSHTR4	40748.2	43066.9	24847.8
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	LTSIAFNDMNPFPMK	LTSIAFNDMNPFPMK	2	LTSIAFNDMNPFPMK2	13393.4	12384.4	13982.2
G3V6N7	G3V6N7	G3V6N7_RAT	Slc12a6	Solute carrier family 12, member 6	1	LTSIGSDEDEETETYQEK	LTSIGSDEDEETETYQEK	3	LTSIGSDEDEETETYQEK3	21389.5	15801.6	22787.6
D4A3I5	D4A3I5	D4A3I5_RAT	Fhip2a	FHF complex subunit HOOK interacting protein 2A	1	LTSILQHAVEALAPSLPLQEDFVYHWK	LTSILQHAVEALAPSLPLQEDFVYHWK	4	LTSILQHAVEALAPSLPLQEDFVYHWK4	8618.68	4061.77	6954.41
D4A6U4	D4A6U4	D4A6U4_RAT	Tecpr2	Tectonin beta-propeller repeat containing 2	1	LTSLACGNEHIWACDSK	LTSLAC(UniMod:4)GNEHIWAC(UniMod:4)DSK	3	LTSLAC(UniMod:4)GNEHIWAC(UniMod:4)DSK3	7088.52	4271.51	6754.49
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	LTSLEEFMAANNNLELIPESLCR	LTSLEEFMAANNNLELIPESLC(UniMod:4)R	3	LTSLEEFMAANNNLELIPESLC(UniMod:4)R3	114958	163999	138876
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	LTSLFPIAYDGEVLLR	LTSLFPIAYDGEVLLR	2	LTSLFPIAYDGEVLLR2	12530.6	6133.13	13052.8
Q5PQL2	Q5PQL2	CNOT9_RAT	Cnot9	CCR4-NOT transcription complex subunit 9	1	LTSLGVIGALVK	LTSLGVIGALVK	2	LTSLGVIGALVK2	4670.79	4119.99	7820.23
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	LTSLLCK	LTSLLC(UniMod:4)K	2	LTSLLC(UniMod:4)K2	86847.5	81977.6	101843
A0A8I6GAD6	A0A8I6GAD6	A0A8I6GAD6_RAT	Nrbp1	Nuclear receptor binding protein 1	1	LTSLLEETLNK	LTSLLEETLNK	2	LTSLLEETLNK2	119057	118909	91725.2
Q00438	Q00438;Q9Z118	PTBP1_RAT	Ptbp1	Polypyrimidine tract-binding protein 1	0	LTSLNVK	LTSLNVK	2	LTSLNVK2	92251.4	113350	96375.5
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LTSLSDR	LTSLSDR	1	LTSLSDR1	14898.2	14122.1	13514.4
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LTSLSDR	LTSLSDR	2	LTSLSDR2	108847	111066	102111
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LTSLSDRYVSHFETDGPHVLLYFDSVPTTR	LTSLSDRYVSHFETDGPHVLLYFDSVPTTR	4	LTSLSDRYVSHFETDGPHVLLYFDSVPTTR4	299515	309189	263763
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	LTSLVAEHK	LTSLVAEHK	2	LTSLVAEHK2	5060.49	8019.48	5508.75
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	LTSLVPFVDAFQLER	LTSLVPFVDAFQLER	2	LTSLVPFVDAFQLER2	114819	98959.7	132928
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	LTSLVPFVDAFQLER	LTSLVPFVDAFQLER	3	LTSLVPFVDAFQLER3	5322.37	5086.02	5675.22
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	LTSLYESLSLR	LTSLYESLSLR	2	LTSLYESLSLR2	23068.9	16413.5	17523
A0A8I5ZKH1	A0A8I5ZKH1	A0A8I5ZKH1_RAT	Ythdc2	RNA helicase	1	LTSNALQEPSSFR	LTSNALQEPSSFR	2	LTSNALQEPSSFR2	4033.42	6736.6	4921.4
F1LU48	F1LU48	F1LU48_RAT	Ergic1	Endoplasmic reticulum-Golgi intermediate compartment protein	1	LTSNPLASHDYILK	LTSNPLASHDYILK	2	LTSNPLASHDYILK2	3055.84		
F1LU48	F1LU48	F1LU48_RAT	Ergic1	Endoplasmic reticulum-Golgi intermediate compartment protein	1	LTSNPLASHDYILK	LTSNPLASHDYILK	3	LTSNPLASHDYILK3	45443.3	70744.2	50277
P35000	P35000	VIPR2_RAT	Vipr2	Vasoactive intestinal polypeptide receptor 2	1	LTSPDVGGNDQSQYK	LTSPDVGGNDQSQYK	2	LTSPDVGGNDQSQYK2	11170.9	12902.6	6701.32
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	LTSPVINTSLDTK	LTSPVINTSLDTK	2	LTSPVINTSLDTK2	51932.6	52959.6	36798.8
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	LTSQQHAILIDLGR	LTSQQHAILIDLGR	2	LTSQQHAILIDLGR2		6602.43	
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	LTSQQHAILIDLGR	LTSQQHAILIDLGR	3	LTSQQHAILIDLGR3	30721.7	21179.4	22535.2
A0A8I6AWZ3	A0A8I6AWZ3	A0A8I6AWZ3_RAT	Agap1	ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	1	LTSQSEAMALQSIR	LTSQSEAMALQSIR	2	LTSQSEAMALQSIR2	3725.55	7805.97	3639.59
Q9Z158	Q9Z158	STX17_RAT	Stx17	Syntaxin-17	1	LTSSCPDLPSQSDKK	LTSSC(UniMod:4)PDLPSQSDKK	3	LTSSC(UniMod:4)PDLPSQSDKK3	12267.5	14796.4	23231.2
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	LTSSLPDVEALR	LTSSLPDVEALR	2	LTSSLPDVEALR2	38375.4	40047.6	37687.2
A0A8I6AAY1	A0A8I6AAY1	A0A8I6AAY1_RAT	Cox7a2l	Cytochrome c oxidase subunit 7A2 like	1	LTSSVTAYDYAGK	LTSSVTAYDYAGK	2	LTSSVTAYDYAGK2	30615.7	28762.9	22029.1
P54001	P54001	P4HA1_RAT	P4ha1	Prolyl 4-hydroxylase subunit alpha-1	1	LTSTATKDPEGFVGHPVNAFK	LTSTATKDPEGFVGHPVNAFK	4	LTSTATKDPEGFVGHPVNAFK4	5455.24	6690.96	9717.35
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	LTSTDTLPK	LTSTDTLPK	2	LTSTDTLPK2	272661	218859	231147
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	LTSTSAITR	LTSTSAITR	2	LTSTSAITR2	299792	301410	243233
D3ZKE1	D3ZKE1	D3ZKE1_RAT	Uvrag	UV radiation resistance associated	1	LTSTSNELK	LTSTSNELK	2	LTSTSNELK2	18353.4	18650.2	
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	LTSTVMLWLQTNK	LTSTVMLWLQTNK	2	LTSTVMLWLQTNK2	142490	149199	136968
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	LTSTVMLWLQTNK	LTSTVMLWLQTNK	3	LTSTVMLWLQTNK3	34945.1	22789.1	25653.7
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	LTSVAQELK	LTSVAQELK	2	LTSVAQELK2	41433.8	37066.5	40231.1
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	LTSVVTAR	LTSVVTAR	2	LTSVVTAR2	9354.94	7634.52	7447.42
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	LTSWSSLSPDPK	LTSWSSLSPDPK	2	LTSWSSLSPDPK2	179405	190714	177643
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	LTSYAMTIPFVR	LTSYAMTIPFVR	2	LTSYAMTIPFVR2	89764.8	79501.7	71119.9
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	LTSYAMTIPFVR	LTSYAMTIPFVR	3	LTSYAMTIPFVR3	18781.8	23239.6	23659.8
M0R8P6	M0R8P6	M0R8P6_RAT	Wwc3	Uncharacterized protein	1	LTSYLQSQLK	LTSYLQSQLK	2	LTSYLQSQLK2	1240.82	5294.67	
A0A8I5ZXD6	A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	1	LTTAMCNEVASLSK	LTTAMC(UniMod:4)NEVASLSK	2	LTTAMC(UniMod:4)NEVASLSK2	16112.5	15924.6	20276.4
P54001	P54001	P4HA1_RAT	P4ha1	Prolyl 4-hydroxylase subunit alpha-1	1	LTTAQYR	LTTAQYR	2	LTTAQYR2	24585	25875.6	26047.9
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	LTTDFHNAEK	LTTDFHNAEK	2	LTTDFHNAEK2	11039.3	7993.81	15354.9
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	LTTDFHNAEK	LTTDFHNAEK	3	LTTDFHNAEK3	62224.3	106389	27141.4
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	LTTEFVK	LTTEFVK	2	LTTEFVK2	52197.5	61322.1	52108.5
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	LTTEQPTAK	LTTEQPTAK	2	LTTEQPTAK2	44848.7	39000.2	41143.8
P01026	P01026	CO3_RAT	C3	Complement C3	1	LTTIELSDDFDEYIMTIEQVIK	LTTIELSDDFDEYIMTIEQVIK	3	LTTIELSDDFDEYIMTIEQVIK3		47521.6	33272.5
M0R9B9	M0R9B9	M0R9B9_RAT	AABR07034438.1	UBX domain protein 7	1	LTTLADLFRPPIDLMHK	LTTLADLFRPPIDLMHK	4	LTTLADLFRPPIDLMHK4	4110.68	6945.64	
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LTTLELLEVR	LTTLELLEVR	2	LTTLELLEVR2	523390	568735	531202
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LTTLELLEVR	LTTLELLEVR	3	LTTLELLEVR3	6499.87	3491.4	9031.68
Q6AYD0	Q6AYD0	Q6AYD0_RAT	Lrrc17	Leucine rich repeat containing 17	1	LTTLLLQHNQIK	LTTLLLQHNQIK	3	LTTLLLQHNQIK3	7159.32	3135.46	6556.02
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	LTTLSGPGGAEYPTESLASAPLNVWTR	LTTLSGPGGAEYPTESLASAPLNVWTR	3	LTTLSGPGGAEYPTESLASAPLNVWTR3	12561.4		2632.08
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	LTTLVDLLLPK	LTTLVDLLLPK	2	LTTLVDLLLPK2	17146.1	13542.2	12737.9
P16310	P16310	GHR_RAT	Ghr	Growth hormone receptor	1	LTTNGDLLDEK	LTTNGDLLDEK	2	LTTNGDLLDEK2	1889.94		3860.01
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	LTTPSPSSIR	LTTPSPSSIR	2	LTTPSPSSIR2	20495.1	18601.6	21952.4
P85108	P69897;B4F7C2;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	LTTPTYGDLNHLVSATMSGVTTCLR	LTTPTYGDLNHLVSATMSGVTTC(UniMod:4)LR	3	LTTPTYGDLNHLVSATMSGVTTC(UniMod:4)LR3	7672.76	89017.9	7615.87
P85108	P69897;B4F7C2;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	LTTPTYGDLNHLVSATMSGVTTCLR	LTTPTYGDLNHLVSATMSGVTTC(UniMod:4)LR	4	LTTPTYGDLNHLVSATMSGVTTC(UniMod:4)LR4	51415	47695.5	61478.1
Q4QQV0	Q4QQV0	Q4QQV0_RAT	Tubb6	Tubulin beta chain	1	LTTPTYGDLNHLVSATMSGVTTSLR	LTTPTYGDLNHLVSATMSGVTTSLR	3	LTTPTYGDLNHLVSATMSGVTTSLR3	56503.1	33820.7	21794.9
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	LTTPTYGDLNHLVSLTMSGITTSLR	LTTPTYGDLNHLVSLTMSGITTSLR	3	LTTPTYGDLNHLVSLTMSGITTSLR3	18995.9	24497.6	20263
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	LTTPTYGDLNHLVSLTMSGITTSLR	LTTPTYGDLNHLVSLTMSGITTSLR	4	LTTPTYGDLNHLVSLTMSGITTSLR4	459874	522589	466138
Q5FVL2	Q5FVL2	EMC8_RAT	Emc8	ER membrane protein complex subunit 8	1	LTTQAYCK	LTTQAYC(UniMod:4)K	2	LTTQAYC(UniMod:4)K2	31081	40174.2	33495.4
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	LTTSPAQNAQQLHER	LTTSPAQNAQQLHER	3	LTTSPAQNAQQLHER3	68500.5	48824.3	82560
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	LTTSTTIENIEITIK	LTTSTTIENIEITIK	2	LTTSTTIENIEITIK2	72687.4	57430.6	49865.4
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	LTTSTTIENIEITIK	LTTSTTIENIEITIK	3	LTTSTTIENIEITIK3	4831.72	3774.76	6613.66
Q9WUD9	Q9WUD9	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	1	LTTVCPTSK	LTTVC(UniMod:4)PTSK	2	LTTVC(UniMod:4)PTSK2	24614.7	14900.2	22342.3
Q9WUD9	Q9WUD9	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	1	LTTVCPTSKPQTQGLAK	LTTVC(UniMod:4)PTSKPQTQGLAK	2	LTTVC(UniMod:4)PTSKPQTQGLAK2	8557	7914.41	10691.8
Q9WUD9	Q9WUD9	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	1	LTTVCPTSKPQTQGLAK	LTTVC(UniMod:4)PTSKPQTQGLAK	3	LTTVC(UniMod:4)PTSKPQTQGLAK3	702540	717341	724736
A0A8I5ZQE4	A0A8I5ZQE4	A0A8I5ZQE4_RAT	Supt5h	Transcription elongation factor SPT5	1	LTTVDSQRPGGMTSTYGR	LTTVDSQRPGGMTSTYGR	3	LTTVDSQRPGGMTSTYGR3	21359.2	22361	21905.5
D4A8F2	D4A8F2	D4A8F2_RAT	Rsu1	Ras suppressor protein 1	1	LTTVPPNVAELK	LTTVPPNVAELK	2	LTTVPPNVAELK2	479855	370455	439366
P0CC10	P0CC10	LRC4B_RAT	Lrrc4b	Leucine-rich repeat-containing protein 4B	1	LTTVPTQAFEYLSK	LTTVPTQAFEYLSK	2	LTTVPTQAFEYLSK2	23908.7	19626.5	23243.7
P09456	P09456	KAP0_RAT	Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit	1	LTVADALEPVQFEDGQK	LTVADALEPVQFEDGQK	2	LTVADALEPVQFEDGQK2	76331	68978.6	80725.4
P09456	P09456	KAP0_RAT	Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit	1	LTVADALEPVQFEDGQK	LTVADALEPVQFEDGQK	3	LTVADALEPVQFEDGQK3	35667.6	35900.4	29108.4
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	LTVCPESVQPLSSQSLSASSSTGSDPR	LTVC(UniMod:4)PESVQPLSSQSLSASSSTGSDPR	3	LTVC(UniMod:4)PESVQPLSSQSLSASSSTGSDPR3	5459.58	7076.03	6988.7
G3V7E6	G3V7E6	G3V7E6_RAT	Pcm1	Pericentriolar material 1	1	LTVCSEAELR	LTVC(UniMod:4)SEAELR	2	LTVC(UniMod:4)SEAELR2	3918.78	17585.6	4182.14
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	LTVDDIR	LTVDDIR	2	LTVDDIR2	102451	74285.9	72981.4
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	LTVDDIRK	LTVDDIRK	2	LTVDDIRK2	16521.1	6616.5	10090.3
Q63372	Q63372	NRX1A_RAT	Nrxn1	Neurexin-1	1	LTVDDQQAMTGQMAGDHTR	LTVDDQQAMTGQMAGDHTR	3	LTVDDQQAMTGQMAGDHTR3	6778.07	6227.34	3736.27
O88377	O88377	PI42B_RAT	Pip4k2b	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta	1	LTVDGVETYMVVTR	LTVDGVETYMVVTR	2	LTVDGVETYMVVTR2	20261.8	26005.2	26473.4
Q9R1Z0	Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	1	LTVDTIFVPNTGK	LTVDTIFVPNTGK	2	LTVDTIFVPNTGK2	1.08709e+06	952643	1.05551e+06
Q9R1Z0	Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	1	LTVDTIFVPNTGK	LTVDTIFVPNTGK	3	LTVDTIFVPNTGK3	36576	20324.6	34202.3
Q9R1Z0	Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	1	LTVDTIFVPNTGKK	LTVDTIFVPNTGKK	2	LTVDTIFVPNTGKK2	47562	59150.4	52132.7
Q9R1Z0	Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	1	LTVDTIFVPNTGKK	LTVDTIFVPNTGKK	3	LTVDTIFVPNTGKK3	201482	243995	272438
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	LTVEDLEK	LTVEDLEK	2	LTVEDLEK2	723295	553297	663362
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	LTVEDLEKER	LTVEDLEKER	2	LTVEDLEKER2	79482.7	66221.3	77054.9
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	LTVEDLEKER	LTVEDLEKER	3	LTVEDLEKER3	2.5255e+06	2.302e+06	2.55796e+06
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	LTVEDLEKERDFYFGK	LTVEDLEKERDFYFGK	3	LTVEDLEKERDFYFGK3	36162.2	69208.2	53135.9
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	LTVEDLEKERDFYFGK	LTVEDLEKERDFYFGK	4	LTVEDLEKERDFYFGK4	31741.8	41639.3	62065.4
F1M6I7	F1M6I7	F1M6I7_RAT	Psma8	Proteasome subunit alpha type	1	LTVEDPVTVEYITR	LTVEDPVTVEYITR	2	LTVEDPVTVEYITR2	3.22952e+06	3.13362e+06	3.542e+06
F1M6I7	F1M6I7	F1M6I7_RAT	Psma8	Proteasome subunit alpha type	1	LTVEDPVTVEYITR	LTVEDPVTVEYITR	3	LTVEDPVTVEYITR3	281598	247916	283057
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	LTVFHPSAYLNGHWLCCR	LTVFHPSAYLNGHWLC(UniMod:4)C(UniMod:4)R	3	LTVFHPSAYLNGHWLC(UniMod:4)C(UniMod:4)R3	44978.4	41311.5	43830.2
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	LTVFHPSAYLNGHWLCCR	LTVFHPSAYLNGHWLC(UniMod:4)C(UniMod:4)R	4	LTVFHPSAYLNGHWLC(UniMod:4)C(UniMod:4)R4	202876	176595	176599
P84060	P84060	DTNB_RAT	Dtnb	Dystrobrevin beta	1	LTVFSVK	LTVFSVK	1	LTVFSVK1	11599.9		4888.47
Q6P7S1	Q6P7S1	ASAH1_RAT	Asah1	Acid ceramidase	1	LTVFTTLIDVTK	LTVFTTLIDVTK	2	LTVFTTLIDVTK2	20376.9	13473.6	20231.9
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	LTVGAENPGCQAVPSAAVTASGER	LTVGAENPGC(UniMod:4)QAVPSAAVTASGER	3	LTVGAENPGC(UniMod:4)QAVPSAAVTASGER3	7307.11	6755.8	10586
P08689	P08689	SHBG_RAT	Shbg	Sex hormone-binding globulin	1	LTVGFGPR	LTVGFGPR	2	LTVGFGPR2	23859	12485.5	22014.4
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	LTVGLTR	LTVGLTR	1	LTVGLTR1	30576.3	43143.3	20265.6
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	LTVGNWSLTCLK	LTVGNWSLTC(UniMod:4)LK	2	LTVGNWSLTC(UniMod:4)LK2	16848.2	24156.1	17345.8
A0A140TAA1	A0A140TAA1	A0A140TAA1_RAT	Igsf8	Immunoglobulin superfamily, member 8	1	LTVHEGQELALGCLAQTK	LTVHEGQELALGC(UniMod:4)LAQTK	3	LTVHEGQELALGC(UniMod:4)LAQTK3		1904.28	6282.16
Q9QZR6	Q9QZR6	SEPT9_RAT	Septin9	Septin-9	1	LTVIDTPGFGDHINNENCWQPIMK	LTVIDTPGFGDHINNENC(UniMod:4)WQPIMK	3	LTVIDTPGFGDHINNENC(UniMod:4)WQPIMK3	14187.7		4029.96
P47861	P47861	SYT5_RAT	Syt5	Synaptotagmin-5	1	LTVIVLEAK	LTVIVLEAK	2	LTVIVLEAK2	54860.6	52590.1	41202.8
A0A0G2K8K8	A0A0G2K8K8	A0A0G2K8K8_RAT	Iglc1	Lambda-chain C1-region-like	1	LTVLDQPK	LTVLDQPK	2	LTVLDQPK2	81586.6	75957.3	54767.7
A0A0G2JXT6	A0A0G2JXT6	MTMR6_RAT	Mtmr6	Myotubularin-related protein 6	1	LTVLEPNTASFNFK	LTVLEPNTASFNFK	2	LTVLEPNTASFNFK2	9785.15	14444.4	11994.6
A0A8I6A4U0	A0A8I6A4U0	A0A8I6A4U0_RAT	ENSRNOG00000064589	Ig-like domain-containing protein	1	LTVLGQPK	LTVLGQPK	1	LTVLGQPK1	28806.5	19441.2	16087.3
A0A8I6A4U0	A0A8I6A4U0	A0A8I6A4U0_RAT	ENSRNOG00000064589	Ig-like domain-containing protein	1	LTVLGQPK	LTVLGQPK	2	LTVLGQPK2	2.42122e+06	2.3477e+06	2.18247e+06
A0A8I6ARU6	A0A8I6ARU6	A0A8I6ARU6_RAT	Galk1	Galactokinase 1	1	LTVLITNSNVR	LTVLITNSNVR	2	LTVLITNSNVR2	18631.8	21112.4	23609.9
Q5FVI3	A0A8I6AP35;Q5FVI3	LRC57_RAT	Lrrc57	Leucine-rich repeat-containing protein 57	0	LTVLPDELCNLK	LTVLPDELC(UniMod:4)NLK	2	LTVLPDELC(UniMod:4)NLK2	22357.3	16192.7	28952.5
Q5FVI3	A0A8I6AP35;Q5FVI3	LRC57_RAT	Lrrc57	Leucine-rich repeat-containing protein 57	0	LTVLPDELCNLKK	LTVLPDELC(UniMod:4)NLKK	3	LTVLPDELC(UniMod:4)NLKK3	20455.6	26478.8	13479.7
D4A8F2	D4A8F2	D4A8F2_RAT	Rsu1	Ras suppressor protein 1	1	LTVLPPELGNLDLTGQK	LTVLPPELGNLDLTGQK	2	LTVLPPELGNLDLTGQK2	423013	451993	410937
D4A8F2	D4A8F2	D4A8F2_RAT	Rsu1	Ras suppressor protein 1	1	LTVLPPELGNLDLTGQK	LTVLPPELGNLDLTGQK	3	LTVLPPELGNLDLTGQK3	169755	142072	176335
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	LTVLYTK	LTVLYTK	1	LTVLYTK1	5819.82	5736.49	4313.04
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	LTVLYTK	LTVLYTK	2	LTVLYTK2	762225	887698	868848
F7FPK8	F7FPK8	F7FPK8_RAT	Lman2	Lectin, mannose-binding 2	1	LTVMTDLEDK	LTVMTDLEDK	2	LTVMTDLEDK2	42877.9	33898.2	32937.8
F7FPK8	F7FPK8	F7FPK8_RAT	Lman2	Lectin, mannose-binding 2	1	LTVMTDLEDKNEWK	LTVMTDLEDKNEWK	3	LTVMTDLEDKNEWK3	79422.3	64608.4	84084.3
F1LZW6	F1LX07;F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	0	LTVNDFVR	LTVNDFVR	2	LTVNDFVR2	228399	262567	264837
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	LTVNHHLLFTFYHISCQQK	LTVNHHLLFTFYHISC(UniMod:4)QQK	4	LTVNHHLLFTFYHISC(UniMod:4)QQK4	3012.08	6521.09	5759.88
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	LTVNSLK	LTVNSLK	2	LTVNSLK2	62502	54076.8	60439.4
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	LTVPAGQPER	LTVPAGQPER	2	LTVPAGQPER2	107595	121166	98864.4
Q6P6V6	Q6P6V6	GP108_RAT	Gpr108	Protein GPR108	1	LTVPQVSGDK	LTVPQVSGDK	2	LTVPQVSGDK2	21719.3	26673.5	30577.3
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LTVQAPPSR	LTVQAPPSR	2	LTVQAPPSR2	4.98156e+07	5.61982e+07	4.57405e+07
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LTVQAPPSRGPGFLSIEPLDLR	LTVQAPPSRGPGFLSIEPLDLR	3	LTVQAPPSRGPGFLSIEPLDLR3	452236	490115	469735
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LTVQAPPSRGPGFLSIEPLDLR	LTVQAPPSRGPGFLSIEPLDLR	4	LTVQAPPSRGPGFLSIEPLDLR4	12473.7	16144.9	11148
D3ZQ30	D3ZQ30	D3ZQ30_RAT	Telo2	Telomere length regulation protein TEL2 homolog	1	LTVQEAIHTLSSSEDAGHILSTLGTLK	LTVQEAIHTLSSSEDAGHILSTLGTLK	4	LTVQEAIHTLSSSEDAGHILSTLGTLK4		3528.34	
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	LTVSQGSAPVQQDK	LTVSQGSAPVQQDK	2	LTVSQGSAPVQQDK2	8345.2	9121.98	12013.4
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	LTVSSLQESGLK	LTVSSLQESGLK	2	LTVSSLQESGLK2	1.62782e+06	1.5346e+06	1.60869e+06
B5DF93	B5DF93	PATL1_RAT	Patl1	Protein PAT1 homolog 1	1	LTVSSVNNPR	LTVSSVNNPR	2	LTVSSVNNPR2	32840.6	18324	10847.5
F1LMI3	F1LMI3	F1LMI3_RAT	Cdh3	Cadherin 3	1	LTVTDLDSPNSPAWR	LTVTDLDSPNSPAWR	2	LTVTDLDSPNSPAWR2	4612.91	10260.5	4401.93
Q91Y81	Q91Y81	SEPT2_RAT	Septin2	Septin-2	1	LTVVDTPGYGDAINSR	LTVVDTPGYGDAINSR	2	LTVVDTPGYGDAINSR2	93837.7	80008.2	99131.8
Q91Y81	Q91Y81	SEPT2_RAT	Septin2	Septin-2	1	LTVVDTPGYGDAINSR	LTVVDTPGYGDAINSR	3	LTVVDTPGYGDAINSR3	4009.78	4342.09	5419.35
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	LTVWYHSDEQK	LTVWYHSDEQK	2	LTVWYHSDEQK2	39233.9	31570.2	48827.1
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	LTVWYHSDEQK	LTVWYHSDEQK	3	LTVWYHSDEQK3	309344	318340	320240
Q9QWG5	Q9QWG5	INP4B_RAT	Inpp4b	Type II inositol 3,4-bisphosphate 4-phosphatase	1	LTVYDVK	LTVYDVK	2	LTVYDVK2	9078.9	8406.58	10063
P29067	P29067;A0A8I6A2I4;P29066	ARRB2_RAT	Arrb2	Beta-arrestin-2	0	LTVYLGK	LTVYLGK	2	LTVYLGK2	262699	248974	239511
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	LTWDPTSGK	LTWDPTSGK	2	LTWDPTSGK2	35627.7	31622.6	43617.3
E9PSX4	E9PSX4	E9PSX4_RAT	Il3ra	Interleukin 3 receptor subunit alpha	1	LTWEWGGGGTR	LTWEWGGGGTR	2	LTWEWGGGGTR2	7471.65	7514.14	9359.99
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	LTWFVNEGLVDGWDDPRFPTVR	LTWFVNEGLVDGWDDPRFPTVR	3	LTWFVNEGLVDGWDDPRFPTVR3	17885	18439	25618.9
P10252	P10252	CD48_RAT	Cd48	CD48 antigen	1	LTWLHTTNQK	LTWLHTTNQK	2	LTWLHTTNQK2	87732.7	79458.6	59176.1
P10252	P10252	CD48_RAT	Cd48	CD48 antigen	1	LTWLHTTNQK	LTWLHTTNQK	3	LTWLHTTNQK3	1.18401e+06	1.23388e+06	1.02484e+06
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	LTWLQNMAEK	LTWLQNMAEK	2	LTWLQNMAEK2	114977	129507	127796
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	LTWLQNMAGK	LTWLQNMAGK	2	LTWLQNMAGK2	44823.7	56674	67768.9
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	LTWLYQLSK	LTWLYQLSK	2	LTWLYQLSK2	46111.5	48165.8	45866.1
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	LTYAYFIGGDAGDAFDGYDFGDDPSDK	LTYAYFIGGDAGDAFDGYDFGDDPSDK	3	LTYAYFIGGDAGDAFDGYDFGDDPSDK3	1.81429e+06	1.75592e+06	2.01671e+06
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	LTYEIEDEKR	LTYEIEDEKR	3	LTYEIEDEKR3	15712.9	2002.79	6855.53
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	LTYEIEDEKRR	LTYEIEDEKRR	3	LTYEIEDEKRR3	8197.82	11888.5	
P07872	P07872	ACOX1_RAT	Acox1	Peroxisomal acyl-coenzyme A oxidase 1	1	LTYGTMVFVR	LTYGTMVFVR	2	LTYGTMVFVR2	9743.15	15768.8	23764.8
Q3ZAU6	Q3ZAU6	Q3ZAU6_RAT	Rnf14	RBR-type E3 ubiquitin transferase	1	LTYHGVSPCK	LTYHGVSPC(UniMod:4)K	3	LTYHGVSPC(UniMod:4)K3	31076.9	40917.9	17579.6
D4A3T0	D4A3T0;F1MAI3	D4A3T0_RAT	Sos1	SOS Ras/Rac guanine nucleotide exchange factor 1	0	LTYHMYADPNFVR	LTYHMYADPNFVR	3	LTYHMYADPNFVR3	1939.89		5202.07
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	LTYIPENTPIDTVVFK	LTYIPENTPIDTVVFK	2	LTYIPENTPIDTVVFK2	34351	41641.2	36074.5
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	LTYIPENTPIDTVVFK	LTYIPENTPIDTVVFK	3	LTYIPENTPIDTVVFK3	8229.83	6536.04	7113.49
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	LTYLGCASVNAPR	LTYLGC(UniMod:4)ASVNAPR	2	LTYLGC(UniMod:4)ASVNAPR2	118423	175265	157400
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	LTYLGCASVNAPR	LTYLGC(UniMod:4)ASVNAPR	3	LTYLGC(UniMod:4)ASVNAPR3	8451.55	16585.8	4631.91
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	LTYLGCMK	LTYLGC(UniMod:4)MK	2	LTYLGC(UniMod:4)MK2	23542.1	46303.5	31705.6
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	LTYLQPALFCGLGELR	LTYLQPALFC(UniMod:4)GLGELR	2	LTYLQPALFC(UniMod:4)GLGELR2	3.36079e+06	3.95909e+06	3.19482e+06
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	LTYLQPALFCGLGELR	LTYLQPALFC(UniMod:4)GLGELR	3	LTYLQPALFC(UniMod:4)GLGELR3	289449	287226	319275
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	LTYLQPALFCGLGELRELDLSR	LTYLQPALFC(UniMod:4)GLGELRELDLSR	3	LTYLQPALFC(UniMod:4)GLGELRELDLSR3	5078.43	9286.92	5143.56
P97943	P97943	SCRB1_RAT	Scarb1	Scavenger receptor class B member 1	1	LTYQESR	LTYQESR	2	LTYQESR2	34078.9	30852	43000.3
Q9JHW5	Q9JHW5	VAMP7_RAT	Vamp7	Vesicle-associated membrane protein 7	1	LTYSHGNYLFHYICQDR	LTYSHGNYLFHYIC(UniMod:4)QDR	3	LTYSHGNYLFHYIC(UniMod:4)QDR3	2631.42	4803.27	5187.69
Q9JHW5	Q9JHW5	VAMP7_RAT	Vamp7	Vesicle-associated membrane protein 7	1	LTYSHGNYLFHYICQDR	LTYSHGNYLFHYIC(UniMod:4)QDR	4	LTYSHGNYLFHYIC(UniMod:4)QDR4	13692.4	17099.7	19662.8
P19999	P19999	MBL1_RAT	Mbl1	Mannose-binding protein A	1	LTYSNWK	LTYSNWK	1	LTYSNWK1		1922.31	
P19999	P19999	MBL1_RAT	Mbl1	Mannose-binding protein A	1	LTYSNWK	LTYSNWK	2	LTYSNWK2	305359	314354	350365
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	LTYSVPYGR	LTYSVPYGR	2	LTYSVPYGR2	446369	555364	481797
Q4V8E4	Q4V8E4	CFA36_RAT	Cfap36	Cilia- and flagella-associated protein 36	1	LTYTEIHQEYK	LTYTEIHQEYK	3	LTYTEIHQEYK3	13716.9	12701.1	18289.2
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	LTYVSFDFHEHCR	LTYVSFDFHEHC(UniMod:4)R	2	LTYVSFDFHEHC(UniMod:4)R2	1902.93		
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	LTYVSFDFHEHCR	LTYVSFDFHEHC(UniMod:4)R	3	LTYVSFDFHEHC(UniMod:4)R3	17321.5	15818.7	24897
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	LTYVSFDFHEHCR	LTYVSFDFHEHC(UniMod:4)R	4	LTYVSFDFHEHC(UniMod:4)R4	23618.1	36204.6	28886.7
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	LTYYDGMIQLSYR	LTYYDGMIQLSYR	2	LTYYDGMIQLSYR2	7691.45		4496.45
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	LTYYDGMIQLSYR	LTYYDGMIQLSYR	3	LTYYDGMIQLSYR3			2221.15
Q06000	Q06000	LIPL_RAT	Lpl	Lipoprotein lipase	1	LVAALYK	LVAALYK	2	LVAALYK2	182524	140455	159133
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	LVAAMEEVFMDK	LVAAMEEVFMDK	2	LVAAMEEVFMDK2	10268.9	8703.23	4010.26
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	LVACAQNGLEVSLSSLNLAVPPPR	LVAC(UniMod:4)AQNGLEVSLSSLNLAVPPPR	3	LVAC(UniMod:4)AQNGLEVSLSSLNLAVPPPR3	21100.6	17635.8	13971
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	LVACWTK	LVAC(UniMod:4)WTK	2	LVAC(UniMod:4)WTK2	65541.2	80727.4	59210.9
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	LVADSHESTQR	LVADSHESTQR	3	LVADSHESTQR3			34211.3
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LVAEDIPLLFSLLSDVFPGVQYHR	LVAEDIPLLFSLLSDVFPGVQYHR	3	LVAEDIPLLFSLLSDVFPGVQYHR3	10876.7		
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LVAEDIPLLFSLLSDVFPGVQYHR	LVAEDIPLLFSLLSDVFPGVQYHR	4	LVAEDIPLLFSLLSDVFPGVQYHR4		1917.45	
O70257	O70257	STX7_RAT	Stx7	Syntaxin-7	1	LVAEFTTALTNFQK	LVAEFTTALTNFQK	2	LVAEFTTALTNFQK2	64324.5	62411.5	53753
Q6AXM8	Q6AXM8	PON2_RAT	Pon2	Serum paraoxonase/arylesterase 2	1	LVAEGFDSANGINISPDK	LVAEGFDSANGINISPDK	2	LVAEGFDSANGINISPDK2	5914.29	6522.5	6483.5
Q6AXM8	Q6AXM8	PON2_RAT	Pon2	Serum paraoxonase/arylesterase 2	1	LVAEGFDSANGINISPDKK	LVAEGFDSANGINISPDKK	3	LVAEGFDSANGINISPDKK3	24740.7	17601.4	12435.5
A0A8I5ZUI2	A0A8I5ZUI2	A0A8I5ZUI2_RAT	Ano10	Anoctamin	1	LVAESLKEESQEEEK	LVAESLKEESQEEEK	3	LVAESLKEESQEEEK3	24784.8	26917	23330.2
A0A8I5Y153	A0A8I5Y153	A0A8I5Y153_RAT	Llgl2	LLGL scribble cell polarity complex component 2	1	LVAFGTSHGFGLFDHQQR	LVAFGTSHGFGLFDHQQR	4	LVAFGTSHGFGLFDHQQR4	3947.98		5538.93
Q6P6S5	Q6P6S5	GET1_RAT	Get1	Guided entry of tail-anchored proteins factor 1	1	LVAFPTR	LVAFPTR	2	LVAFPTR2	15293.3		19119.2
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	LVAGEHGLIIR	LVAGEHGLIIR	3	LVAGEHGLIIR3	62113.4	63376.7	58203.9
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	LVAGVAFK	LVAGVAFK	2	LVAGVAFK2	558803	560995	517287
O70351	O70351	HCD2_RAT	Hsd17b10	3-hydroxyacyl-CoA dehydrogenase type-2	1	LVAGVMGQNEPDQGGQR	LVAGVMGQNEPDQGGQR	2	LVAGVMGQNEPDQGGQR2	55113.2	44472.3	32279.7
O70351	O70351	HCD2_RAT	Hsd17b10	3-hydroxyacyl-CoA dehydrogenase type-2	1	LVAGVMGQNEPDQGGQR	LVAGVMGQNEPDQGGQR	3	LVAGVMGQNEPDQGGQR3	47357.3	62651.5	61247.4
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	LVAHVSWELQR	LVAHVSWELQR	3	LVAHVSWELQR3	2368.31	3144.13	9167.28
M0R402	M0R402	M0R402_RAT	Tmx3	Thioredoxin-related transmembrane protein 3	1	LVAIAVIDEK	LVAIAVIDEK	2	LVAIAVIDEK2	21031.1	18650.1	18109.4
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	LVAIVDPHIK	LVAIVDPHIK	2	LVAIVDPHIK2	154419	163888	118337
Q63507	Q6TUH8;A0A8I6AL87;A0A8I6G5N0;Q63507	RL14_RAT	Rpl14	Large ribosomal subunit protein eL14	0	LVAIVDVIDQNR	LVAIVDVIDQNR	2	LVAIVDVIDQNR2	52906.7	52536.1	48180.2
A0A8I5ZPZ9	A0A8I5ZPZ9	A0A8I5ZPZ9_RAT	Ptpa	Serine/threonine-protein phosphatase 2A activator	1	LVALLDTLDR	LVALLDTLDR	2	LVALLDTLDR2	77974.7	60031.7	60574.5
A0A8I5ZXC8	A0A8I5ZXC8	A0A8I5ZXC8_RAT	Mrps16	Mitochondrial ribosomal protein S16	1	LVALNLDR	LVALNLDR	2	LVALNLDR2	24901.2	19581.7	22007.5
P31211	P31211	CBG_RAT	Serpina6	Corticosteroid-binding globulin	1	LVALNPDK	LVALNPDK	2	LVALNPDK2	674479	513574	437823
Q80Z70	Q80Z70	SE1L1_RAT	Sel1l	Protein sel-1 homolog 1	1	LVANHVASDISLTGGSVVQR	LVANHVASDISLTGGSVVQR	3	LVANHVASDISLTGGSVVQR3	26250.5	19986.2	24303.4
Q5FWY5	Q5FWY5	AIP_RAT	Aip	AH receptor-interacting protein	1	LVAQEYYEVLDHCSSILNK	LVAQEYYEVLDHC(UniMod:4)SSILNK	3	LVAQEYYEVLDHC(UniMod:4)SSILNK3	15205.9	6404.42	5131.82
F1M9C9	F1M9C9	F1M9C9_RAT	Hars2	histidine--tRNA ligase	1	LVAQFDPK	LVAQFDPK	2	LVAQFDPK2		5500.93	
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	LVAQIEAAK	LVAQIEAAK	2	LVAQIEAAK2	14127.4	15332.5	10125.1
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	LVAQLTQECQEQR	LVAQLTQEC(UniMod:4)QEQR	2	LVAQLTQEC(UniMod:4)QEQR2	51977.5	38768	33833.9
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	LVAQLTQECQEQR	LVAQLTQEC(UniMod:4)QEQR	3	LVAQLTQEC(UniMod:4)QEQR3	10385.8	10470.3	19905.5
Q8VHF5	Q8VHF5	CISY_RAT	Cs	Citrate synthase, mitochondrial	1	LVAQLYK	LVAQLYK	2	LVAQLYK2	1.47264e+06	1.34839e+06	1.48043e+06
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	LVASAEQLLK	LVASAEQLLK	2	LVASAEQLLK2	34339	39927.6	40414.8
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	LVATLHPCMSDVAEDLCSMLR	LVATLHPC(UniMod:4)MSDVAEDLC(UniMod:4)SMLR	3	LVATLHPC(UniMod:4)MSDVAEDLC(UniMod:4)SMLR3	15147.5	14436.2	11795.5
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	LVATNMIANGK	LVATNMIANGK	2	LVATNMIANGK2	6061.3	7308.29	19303.6
Q9EQX6	Q9EQX6	PDGFC_RAT	Pdgfc	Platelet-derived growth factor C	1	LVAVDENVR	LVAVDENVR	2	LVAVDENVR2	79843.9	89754.1	108037
P01026	P01026	CO3_RAT	C3	Complement C3	1	LVAYYTLIGANGQR	LVAYYTLIGANGQR	2	LVAYYTLIGANGQR2	546567	615741	521341
P01026	P01026	CO3_RAT	C3	Complement C3	1	LVAYYTLIGANGQR	LVAYYTLIGANGQR	3	LVAYYTLIGANGQR3	232654	265493	214870
Q32KJ5	Q32KJ5	Q32KJ5_RAT	Gns	N-acetylglucosamine-6-sulfatase	1	LVCGYQTFFAGK	LVC(UniMod:4)GYQTFFAGK	2	LVC(UniMod:4)GYQTFFAGK2	16461.3	12664.5	19367.6
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	LVCLNTK	LVC(UniMod:4)LNTK	1	LVC(UniMod:4)LNTK1	6307.21	6550.39	2284.73
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	LVCLNTK	LVC(UniMod:4)LNTK	2	LVC(UniMod:4)LNTK2	792850	737209	884801
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	LVCNINK	LVC(UniMod:4)NINK	1	LVC(UniMod:4)NINK1		2410.07	
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	LVCNINK	LVC(UniMod:4)NINK	2	LVC(UniMod:4)NINK2	43238.4	53340.3	52774
Q6J1Y9	Q6J1Y9	UBP19_RAT	Usp19	Ubiquitin carboxyl-terminal hydrolase 19	1	LVCPVCAK	LVC(UniMod:4)PVC(UniMod:4)AK	2	LVC(UniMod:4)PVC(UniMod:4)AK2	10200.1	10975.2	7495.76
B5DEI0	B5DEI0	B5DEI0_RAT	Pcyox1l	Pcyox1l protein	1	LVCSGLLK	LVC(UniMod:4)SGLLK	2	LVC(UniMod:4)SGLLK2	84634	75148.3	81907.5
Q923V4	Q923V4	FBX6_RAT	Fbxo6	F-box only protein 6	1	LVCSLWR	LVC(UniMod:4)SLWR	2	LVC(UniMod:4)SLWR2	179131	173810	150154
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	LVCTDFR	LVC(UniMod:4)TDFR	2	LVC(UniMod:4)TDFR2	41549.7	58539.4	62471.6
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	LVCTILDTCGQYFDR	LVC(UniMod:4)TILDTC(UniMod:4)GQYFDR	2	LVC(UniMod:4)TILDTC(UniMod:4)GQYFDR2	4553.05	3313.65	312.63
M0RCA3	M0RCA3	M0RCA3_RAT	Zfpl1	Zinc finger protein-like 1	1	LVCYDLFHWACINER	LVC(UniMod:4)YDLFHWAC(UniMod:4)INER	3	LVC(UniMod:4)YDLFHWAC(UniMod:4)INER3	36213.8	30099.5	22188.3
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	LVDADGPLAR	LVDADGPLAR	2	LVDADGPLAR2	193191	214280	194543
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	LVDAVMGAEIR	LVDAVMGAEIR	2	LVDAVMGAEIR2	38430.1	32266.5	34062.8
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	LVDCCSER	LVDC(UniMod:4)C(UniMod:4)SER	2	LVDC(UniMod:4)C(UniMod:4)SER2	7441.96	9803.29	
P35284	P35284	RAB12_RAT	Rab12	Ras-related protein Rab-12	1	LVDDILK	LVDDILK	2	LVDDILK2	45198	55160.2	51395.2
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	LVDEPGHCADFHPSGTVVAIGTHSGR	LVDEPGHC(UniMod:4)ADFHPSGTVVAIGTHSGR	4	LVDEPGHC(UniMod:4)ADFHPSGTVVAIGTHSGR4	10095.6	8868.46	11767.1
A0A8I6A9E8	Q64595;A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	0	LVDFGFAK	LVDFGFAK	2	LVDFGFAK2	57874	40403.1	46902.7
F1LP90	A0A0G2K490;A0A8I5ZLV4;F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	0	LVDFGVSAQLDR	LVDFGVSAQLDR	2	LVDFGVSAQLDR2	113679	97294.1	72089.8
Q02293	Q02293	FNTB_RAT	Fntb	Protein farnesyltransferase subunit beta	1	LVDGCYSFWQAGLLPLLHR	LVDGC(UniMod:4)YSFWQAGLLPLLHR	3	LVDGC(UniMod:4)YSFWQAGLLPLLHR3			6994.74
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	LVDGGDSCR	LVDGGDSC(UniMod:4)R	1	LVDGGDSC(UniMod:4)R1	579368	975027	893703
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	LVDGGDSCR	LVDGGDSC(UniMod:4)R	2	LVDGGDSC(UniMod:4)R2	12591.8	14172.5	20886.5
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	LVDGLATSWVNSSNYK	LVDGLATSWVNSSNYK	2	LVDGLATSWVNSSNYK2	10372		4002.39
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	LVDHNGQLISDWIPK	LVDHNGQLISDWIPK	3	LVDHNGQLISDWIPK3		19810.6	4913.49
Q63942	P62824;Q63942	RAB3D_RAT	Rab3d	GTP-binding protein Rab-3D	0	LVDIICDK	LVDIIC(UniMod:4)DK	2	LVDIIC(UniMod:4)DK2	285401	283808	264680
Q03626	Q6IE52;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	LVDIKGDPIPNEQVFIK	LVDIKGDPIPNEQVFIK	2	LVDIKGDPIPNEQVFIK2	39772	23604.4	24245.5
Q03626	Q6IE52;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	LVDIKGDPIPNEQVFIK	LVDIKGDPIPNEQVFIK	3	LVDIKGDPIPNEQVFIK3	1.3946e+06	1.05215e+06	1.03329e+06
Q03626	Q6IE52;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	LVDIKGDPIPNEQVFIK	LVDIKGDPIPNEQVFIK	4	LVDIKGDPIPNEQVFIK4	1924.7		
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	LVDIKGDPIPNEQVLIK	LVDIKGDPIPNEQVLIK	2	LVDIKGDPIPNEQVLIK2	3.35272e+06	2.99611e+06	2.65243e+06
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	LVDIKGDPIPNEQVLIK	LVDIKGDPIPNEQVLIK	3	LVDIKGDPIPNEQVLIK3	143629	178026	131836
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	LVDIKGDPIPNEQVLIK	LVDIKGDPIPNEQVLIK	4	LVDIKGDPIPNEQVLIK4	132055	131718	105510
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	LVDIKGDPIPNEQVLIKAR	LVDIKGDPIPNEQVLIKAR	3	LVDIKGDPIPNEQVLIKAR3	12252	29820.8	17785.6
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	LVDIKGDPIPNEQVLIKAR	LVDIKGDPIPNEQVLIKAR	4	LVDIKGDPIPNEQVLIKAR4	66681.8	83579.9	88481.9
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	LVDLPISKPFFK	LVDLPISKPFFK	3	LVDLPISKPFFK3	26462.6	21411.1	24576.2
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	LVDLPLGLPFYK	LVDLPLGLPFYK	2	LVDLPLGLPFYK2	11857.5	16674.3	16953.5
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	LVDMMER	LVDMMER	2	LVDMMER2	133361	149194	124073
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	LVDNFQHEENLLQQVASK	LVDNFQHEENLLQQVASK	3	LVDNFQHEENLLQQVASK3	18616.6	22872.8	9528.44
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	LVDNIFPEDPK	LVDNIFPEDPK	2	LVDNIFPEDPK2	31679.7	19594	22321
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	LVDNIFPEDPKDGLVK	LVDNIFPEDPKDGLVK	3	LVDNIFPEDPKDGLVK3	11525.3	16539.3	15377.7
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	LVDNWAR	LVDNWAR	2	LVDNWAR2	36810.1	39133.5	34164.9
Q5M9G3	Q5M9G3	CAPR1_RAT	Caprin1	Caprin-1	1	LVDPERDMSLR	LVDPERDMSLR	3	LVDPERDMSLR3	113732	156996	122839
A0A8I5Y224	A0A8I5Y224	A0A8I5Y224_RAT	Adam9	ADAM metallopeptidase domain 9	1	LVDPGEECDCGTPK	LVDPGEEC(UniMod:4)DC(UniMod:4)GTPK	2	LVDPGEEC(UniMod:4)DC(UniMod:4)GTPK2	18804.1	16642.8	11682.7
B5DEZ6	B5DEZ6	B5DEZ6_RAT	Gnpda2	Glucosamine-6-phosphate isomerase	1	LVDPLCSMK	LVDPLC(UniMod:4)SMK	2	LVDPLC(UniMod:4)SMK2	12576.3	12970.2	10776.5
B2RYN0	B2RYN0	B2RYN0_RAT	Pgm3	Phosphoacetylglucosamine mutase	1	LVDPLGEMLAPSWEEHATR	LVDPLGEMLAPSWEEHATR	3	LVDPLGEMLAPSWEEHATR3	5534.12	9435.3	5256.95
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	LVDQEFLADPLVPPQLTIK	LVDQEFLADPLVPPQLTIK	3	LVDQEFLADPLVPPQLTIK3	63340.1	59956.7	70705.2
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	LVDQTPK	LVDQTPK	1	LVDQTPK1	3361.62	1843.37	
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	LVDQTPK	LVDQTPK	2	LVDQTPK2	1.35665e+06	1.22026e+06	1.13504e+06
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	LVDRNVDNFK	LVDRNVDNFK	2	LVDRNVDNFK2	31496.4	30368.5	30470.5
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	LVDRNVDNFK	LVDRNVDNFK	3	LVDRNVDNFK3	1.93574e+06	2.46306e+06	2.86792e+06
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	LVDRNVDNFKADVK	LVDRNVDNFKADVK	3	LVDRNVDNFKADVK3	69431.1	93151.3	87337.9
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	LVDRNVDNFKADVK	LVDRNVDNFKADVK	4	LVDRNVDNFKADVK4	16245.7	9873.58	14631.3
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	LVDSCCQHLEK	LVDSC(UniMod:4)C(UniMod:4)QHLEK	2	LVDSC(UniMod:4)C(UniMod:4)QHLEK2	25545.6	11669.1	16078.5
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	LVDSCCQHLEK	LVDSC(UniMod:4)C(UniMod:4)QHLEK	3	LVDSC(UniMod:4)C(UniMod:4)QHLEK3	102729	122714	71929.2
B2GV38	B2GV38	UBL4A_RAT	Ubl4a	Ubiquitin-like protein 4A	1	LVDSSATPIWQLISK	LVDSSATPIWQLISK	2	LVDSSATPIWQLISK2	48680.8	28895.7	46968.9
B2GV38	B2GV38	UBL4A_RAT	Ubl4a	Ubiquitin-like protein 4A	1	LVDSSATPIWQLISK	LVDSSATPIWQLISK	3	LVDSSATPIWQLISK3	11814.4	15083.3	18871.5
Q5XIP1	Q5XIP1	PELO_RAT	Pelo	Protein pelota homolog	1	LVDSVKENAGTVR	LVDSVKENAGTVR	3	LVDSVKENAGTVR3	6015.36	3735.36	8373.55
D4AC45	D4AC45	D4AC45_RAT	Agpat2	1-acyl-sn-glycerol-3-phosphate acyltransferase	1	LVDTCYQSMR	LVDTC(UniMod:4)YQSMR	2	LVDTC(UniMod:4)YQSMR2	4350.72	7186.73	6268.18
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LVDTGDK	LVDTGDK	1	LVDTGDK1	10325.5	4665.7	9220.63
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LVDTGDKFR	LVDTGDKFR	2	LVDTGDKFR2	74086.2	69719.5	54428.8
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	LVDTLCSETQER	LVDTLC(UniMod:4)SETQER	2	LVDTLC(UniMod:4)SETQER2	35378.2	21684.8	26095.8
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	LVDTLCSETQERDER	LVDTLC(UniMod:4)SETQERDER	3	LVDTLC(UniMod:4)SETQERDER3	290924	208956	247177
Q9QZR6	Q9QZR6	SEPT9_RAT	Septin9	Septin-9	1	LVDTLSQR	LVDTLSQR	2	LVDTLSQR2		11863	10285
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	LVDVEDMNYQAAK	LVDVEDMNYQAAK	2	LVDVEDMNYQAAK2	27919.7	25122.5	28138.7
Q68FR2	O08838;O08839;Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	0	LVDYDSAR	LVDYDSAR	2	LVDYDSAR2	1.09847e+07	1.0234e+07	1.17877e+07
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	LVDYFLNLASSQK	LVDYFLNLASSQK	2	LVDYFLNLASSQK2	17073	23074.5	16083.8
D4AC65	D4AC65	D4AC65_RAT	Coa7	Cytochrome c oxidase assembly factor 7	1	LVDYLEGIQK	LVDYLEGIQK	2	LVDYLEGIQK2	3810.2	3271.48	1327.14
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	LVEAAQGLGQLSETVK	LVEAAQGLGQLSETVK	2	LVEAAQGLGQLSETVK2	8320.78	10262.4	13812.4
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	LVEAAQGLGQLSETVK	LVEAAQGLGQLSETVK	3	LVEAAQGLGQLSETVK3	3759.72	4260.43	
Q5XIN4	Q5XIN4	Q5XIN4_RAT	Mtmr9	Myotubularin related protein 9	1	LVEACNEQTHSMDR	LVEAC(UniMod:4)NEQTHSMDR	3	LVEAC(UniMod:4)NEQTHSMDR3	58035.4	64070.3	67315
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	LVEAELR	LVEAELR	2	LVEAELR2	33259.2	28373.2	35882.6
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LVEAISR	LVEAISR	2	LVEAISR2	349433	379406	298043
A0A8I6G807	A0A8I6GKR8;A0A8I6AWW2;A0A8I5ZX29;A0A8I6G807;D3ZHB3;A0A8I6AKK1	A0A8I6G807_RAT	LOC103692210	40S ribosomal protein S12	0	LVEALCAEHQINLIK	LVEALC(UniMod:4)AEHQINLIK	2	LVEALC(UniMod:4)AEHQINLIK2	2273.78		
A0A8I6G807	A0A8I6GKR8;A0A8I6AWW2;A0A8I5ZX29;A0A8I6G807;D3ZHB3;A0A8I6AKK1	A0A8I6G807_RAT	LOC103692210	40S ribosomal protein S12	0	LVEALCAEHQINLIK	LVEALC(UniMod:4)AEHQINLIK	3	LVEALC(UniMod:4)AEHQINLIK3	52588.2	77423.8	42046.8
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	LVEATEGLR	LVEATEGLR	2	LVEATEGLR2	14896.7	16604.4	16435.9
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	LVECLETVLNK	LVEC(UniMod:4)LETVLNK	2	LVEC(UniMod:4)LETVLNK2	28990.2	24065.1	18175.4
Q9Z272	Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	1	LVECQYELTDR	LVEC(UniMod:4)QYELTDR	2	LVEC(UniMod:4)QYELTDR2	10946.4	9352.46	5012.09
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	LVECSGR	LVEC(UniMod:4)SGR	2	LVEC(UniMod:4)SGR2	238611		291178
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LVEDEER	LVEDEER	2	LVEDEER2	63151.3	87791.7	
A0A8I6G3S1	A0A8I6G3S1	A0A8I6G3S1_RAT	Mon1b	Vacuolar fusion protein MON1 homolog	1	LVEDGMHNLGALR	LVEDGMHNLGALR	3	LVEDGMHNLGALR3	18997.3	23811.3	20561.5
Q5XI78	Q5XI78;D3ZQD3	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	0	LVEDHLAVQSLIR	LVEDHLAVQSLIR	2	LVEDHLAVQSLIR2	3391.33	5304.39	5041.42
Q5XI78	Q5XI78;D3ZQD3	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	0	LVEDHLAVQSLIR	LVEDHLAVQSLIR	3	LVEDHLAVQSLIR3	97250	79530.1	84659.8
F7F288	F7F288	F7F288_RAT	Bcap29	B-cell receptor-associated protein	1	LVEDKER	LVEDKER	2	LVEDKER2			28705.7
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	LVEDMENK	LVEDMENK	1	LVEDMENK1	1745.11	1875.69	5029.14
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	LVEDMENK	LVEDMENK	2	LVEDMENK2	1.73389e+06	1.73143e+06	1.82423e+06
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	LVEECNGR	LVEEC(UniMod:4)NGR	2	LVEEC(UniMod:4)NGR2	149854	146169	148772
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	LVEEFMLLANMAVAHK	LVEEFMLLANMAVAHK	3	LVEEFMLLANMAVAHK3	27093.5	23042.8	24476.4
Q6AYY8	Q6AYY8	ACATN_RAT	Slc33a1	Acetyl-coenzyme A transporter 1	1	LVEEGVPK	LVEEGVPK	2	LVEEGVPK2	42796.3	47516.1	46308.1
Q62656	Q62656	PTPRZ_RAT	Ptprz1	Receptor-type tyrosine-protein phosphatase zeta	1	LVEEIGWSYTGALNQK	LVEEIGWSYTGALNQK	2	LVEEIGWSYTGALNQK2	7469.53	10752.5	13570.4
Q62656	Q62656	PTPRZ_RAT	Ptprz1	Receptor-type tyrosine-protein phosphatase zeta	1	LVEEIGWSYTGALNQK	LVEEIGWSYTGALNQK	3	LVEEIGWSYTGALNQK3	8184.12	7035.56	3629.65
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	LVEEKPTK	LVEEKPTK	2	LVEEKPTK2	14695.6		26267
A0A0G2QC19	A0A0G2QC19	A0A0G2QC19_RAT	Dnajc21	DnaJ heat shock protein family (Hsp40) member C21	1	LVEEQNAEK	LVEEQNAEK	2	LVEEQNAEK2	9151.53	7918.13	7137.23
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	LVEGCLVGGR	LVEGC(UniMod:4)LVGGR	2	LVEGC(UniMod:4)LVGGR2	79166.6	106252	134372
A0A8I6GLU8	A0A8I6GLU8	A0A8I6GLU8_RAT	Tardbp	TAR DNA-binding protein 43	1	LVEGILHAPDAGWGNLVYVVNYPK	LVEGILHAPDAGWGNLVYVVNYPK	3	LVEGILHAPDAGWGNLVYVVNYPK3	27374.9	39389.7	15811.6
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	LVEGLQGQTWSSDWVEELRK	LVEGLQGQTWSSDWVEELRK	3	LVEGLQGQTWSSDWVEELRK3	71053.2	72345.1	77199.1
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LVEGQTHISISR	LVEGQTHISISR	2	LVEGQTHISISR2	1.58294e+06	1.69057e+06	1.31737e+06
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LVEGQTHISISR	LVEGQTHISISR	3	LVEGQTHISISR3	45349.1	41304.2	67981.3
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LVEGQTHISISRDQFQAALGK	LVEGQTHISISRDQFQAALGK	3	LVEGQTHISISRDQFQAALGK3	32761.2	16364.7	17245.7
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	LVEGQTHISISRDQFQAALGK	LVEGQTHISISRDQFQAALGK	4	LVEGQTHISISRDQFQAALGK4	67891.6	66526.3	71871.7
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	LVEGTCFR	LVEGTC(UniMod:4)FR	2	LVEGTC(UniMod:4)FR2	61468	63670.4	65085.9
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	LVEHFCAEFK	LVEHFC(UniMod:4)AEFK	2	LVEHFC(UniMod:4)AEFK2	4097.51	1542	
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	LVEHFCAEFK	LVEHFC(UniMod:4)AEFK	3	LVEHFC(UniMod:4)AEFK3	69952.1	63337.8	54425.9
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	LVEHLHNFIFFR	LVEHLHNFIFFR	3	LVEHLHNFIFFR3	7648.21	4894.58	3084.69
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	LVEHLHNFIFFR	LVEHLHNFIFFR	4	LVEHLHNFIFFR4	20643.8	24520.1	18177.8
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	LVEHVPGQPVR	LVEHVPGQPVR	2	LVEHVPGQPVR2	8653.08		9460.85
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	LVEHVPGQPVR	LVEHVPGQPVR	3	LVEHVPGQPVR3	90698	107398	91039.8
A0A0G2K542	A0A0G2K542	A0A0G2K542_RAT	Ugp2	UTP--glucose-1-phosphate uridylyltransferase	1	LVEIAQVPK	LVEIAQVPK	2	LVEIAQVPK2	59698.4	63786.1	56079.6
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	LVEIDNGK	LVEIDNGK	2	LVEIDNGK2	38417.7	45235.8	38890.8
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	LVEIGAQK	LVEIGAQK	2	LVEIGAQK2	171910	160051	165411
Q6AYG5	Q6AYG5	ECHD1_RAT	Echdc1	Ethylmalonyl-CoA decarboxylase	1	LVEIIGSR	LVEIIGSR	2	LVEIIGSR2	54641.9	67147.4	57602.9
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	LVEINGQNVENK	LVEINGQNVENK	2	LVEINGQNVENK2	8104.23	5837.85	8282.29
P86182	P86182	CCD22_RAT	Ccdc22	Coiled-coil domain-containing protein 22	1	LVEIQELHQSVR	LVEIQELHQSVR	3	LVEIQELHQSVR3	12421.6	11207.7	6526.46
Q66H91	Q66H91	GIT2_RAT	Git2	ARF GTPase-activating protein GIT2	1	LVEIQYELTDR	LVEIQYELTDR	2	LVEIQYELTDR2	8594.12	8928.07	7295
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	LVEIVHPSQEEDR	LVEIVHPSQEEDR	3	LVEIVHPSQEEDR3	104240	96180.9	90315.8
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	LVEIVHPSQEEDRHSNASQSLCEIVR	LVEIVHPSQEEDRHSNASQSLC(UniMod:4)EIVR	4	LVEIVHPSQEEDRHSNASQSLC(UniMod:4)EIVR4	24450.8	30171.2	29414.8
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	LVEKLPLPQNEVIADTSSTK	LVEKLPLPQNEVIADTSSTK	3	LVEKLPLPQNEVIADTSSTK3	4874.74	6873.05	7098.2
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	LVEKPSPLTLAPHDFANIK	LVEKPSPLTLAPHDFANIK	3	LVEKPSPLTLAPHDFANIK3	72043.2	83051	59271.2
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	LVEKPSPLTLAPHDFANIK	LVEKPSPLTLAPHDFANIK	4	LVEKPSPLTLAPHDFANIK4	311792	416239	385535
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	LVELCVAK	LVELC(UniMod:4)VAK	2	LVELC(UniMod:4)VAK2	72774.8	70536.4	63700.8
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	LVELIHPHQDEDR	LVELIHPHQDEDR	4	LVELIHPHQDEDR4	8837.43	7697.34	8366.73
P83953	Q56R16;P83953;A0A0G2JZS1	IMA5_RAT	Kpna1	Importin subunit alpha-5	0	LVELLMHNDYK	LVELLMHNDYK	2	LVELLMHNDYK2	9808.64	8573.17	11580
P83953	Q56R16;P83953;A0A0G2JZS1	IMA5_RAT	Kpna1	Importin subunit alpha-5	0	LVELLMHNDYK	LVELLMHNDYK	3	LVELLMHNDYK3	44113.2	53083.6	46830.8
Q9WVS2	Q9WVS2	OSGEP_RAT	Osgep	tRNA N6-adenosine threonylcarbamoyltransferase	1	LVELPYTVK	LVELPYTVK	2	LVELPYTVK2	7803.84		
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	LVENCVCLLR	LVENC(UniMod:4)VC(UniMod:4)LLR	2	LVENC(UniMod:4)VC(UniMod:4)LLR2	5021.6	5364.73	7703.14
Q8K581	Q8K581	TXND9_RAT	Txndc9	Thioredoxin domain-containing protein 9	1	LVENHLDSEIQK	LVENHLDSEIQK	2	LVENHLDSEIQK2	2696.91		
Q8K581	Q8K581	TXND9_RAT	Txndc9	Thioredoxin domain-containing protein 9	1	LVENHLDSEIQK	LVENHLDSEIQK	3	LVENHLDSEIQK3	22241.9	19209.8	13482.3
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	LVEPGSPAEK	LVEPGSPAEK	2	LVEPGSPAEK2	661035	590469	546121
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	LVEPLDYENVITQR	LVEPLDYENVITQR	2	LVEPLDYENVITQR2	18778	22002.3	22309.5
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	LVEPLDYENVITQR	LVEPLDYENVITQR	3	LVEPLDYENVITQR3	7401.6	7591.39	5734.15
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	LVEPVGRPSILK	LVEPVGRPSILK	3	LVEPVGRPSILK3	12050.2	4114.8	6453.29
Q05030	Q05030	PGFRB_RAT	Pdgfrb	Platelet-derived growth factor receptor beta	1	LVEPVTDYLFGVPSR	LVEPVTDYLFGVPSR	2	LVEPVTDYLFGVPSR2	14797.9	22501.1	26167.1
Q05030	Q05030	PGFRB_RAT	Pdgfrb	Platelet-derived growth factor receptor beta	1	LVEPVTDYLFGVPSR	LVEPVTDYLFGVPSR	3	LVEPVTDYLFGVPSR3	11998.6	16560.7	15910.9
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	LVEQHGSDVWWTLPAEK	LVEQHGSDVWWTLPAEK	3	LVEQHGSDVWWTLPAEK3	43461.9	31409.6	43430.6
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	LVEQLHIHEPAQHVQALLGYR	LVEQLHIHEPAQHVQALLGYR	4	LVEQLHIHEPAQHVQALLGYR4	2822.24	2130.57	
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	LVEQLTGLISSSPGPPTR	LVEQLTGLISSSPGPPTR	3	LVEQLTGLISSSPGPPTR3	8418.82	12200.6	7271.04
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	LVEQVIMPNK	LVEQVIMPNK	2	LVEQVIMPNK2	3.2955e+06	3.42261e+06	3.50447e+06
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	LVEQVIMPNK	LVEQVIMPNK	3	LVEQVIMPNK3	6266.1	5617.32	6217.83
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	LVEQVIMPNKYTR	LVEQVIMPNKYTR	3	LVEQVIMPNKYTR3	9378.88	11682.4	14082.8
D3ZQ30	D3ZQ30	D3ZQ30_RAT	Telo2	Telomere length regulation protein TEL2 homolog	1	LVEQVPDR	LVEQVPDR	2	LVEQVPDR2	8817.69	6712.46	13001.3
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	LVESDSDVNANK	LVESDSDVNANK	2	LVESDSDVNANK2	9112.66	7523.64	7768.71
M0R7Q2	M0R7Q2	M0R7Q2_RAT	ENSRNOG00000065283	Ig-like domain-containing protein	1	LVESGGGLVLPGASLK	LVESGGGLVLPGASLK	2	LVESGGGLVLPGASLK2	13987.6	14288.7	16442.4
A0A8I6ALW9	A0A8I6ALW9;A0A8I6GIW0	A0A8I6ALW9_RAT	ENSRNOG00000065952	Ig-like domain-containing protein	0	LVESGGGLVQPGR	LVESGGGLVQPGR	2	LVESGGGLVQPGR2	1.76587e+06	1.61539e+06	1.60012e+06
A0A8I6ALW9	A0A8I6ALW9;A0A8I6GIW0	A0A8I6ALW9_RAT	ENSRNOG00000065952	Ig-like domain-containing protein	0	LVESGGGLVQPGR	LVESGGGLVQPGR	3	LVESGGGLVQPGR3	24865.2	28756	35757.3
P55053	P55053	FABP5_RAT	Fabp5	Fatty acid-binding protein 5	1	LVESHGFEDYMK	LVESHGFEDYMK	2	LVESHGFEDYMK2	1025.31	5009.18	5090.08
P55053	P55053	FABP5_RAT	Fabp5	Fatty acid-binding protein 5	1	LVESHGFEDYMK	LVESHGFEDYMK	3	LVESHGFEDYMK3	107952	79930.4	81398.8
D3ZXF9	D3ZXF9	D3ZXF9_RAT	Mrpl12	Mitochondrial ribosomal protein L12	1	LVESLPQEIK	LVESLPQEIK	2	LVESLPQEIK2	34006.5	32643	23125.4
F7F115	F7F115	F7F115_RAT	Upf3a	UPF3A, regulator of nonsense mediated mRNA decay	1	LVESQPETPGER	LVESQPETPGER	2	LVESQPETPGER2	10916.9	5272.11	
A0A0G2KAU4	A0A0G2KAU4	A0A0G2KAU4_RAT	Rasgrp3	RAS guanyl releasing protein 3	1	LVESVFR	LVESVFR	2	LVESVFR2	39708.9	47504.2	53015.6
A0A8I6AD03	A0A8I6AD03	A0A8I6AD03_RAT	Aplp1	Amyloid beta precursor like protein 1	1	LVETHATR	LVETHATR	2	LVETHATR2			28070.9
Q4V7F2	Q4V7F2	CREL1_RAT	Creld1	Protein disulfide isomerase Creld1	1	LVEVLEGVCSK	LVEVLEGVC(UniMod:4)SK	2	LVEVLEGVC(UniMod:4)SK2	8012.79	6965.94	6585.56
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	LVEVNGENVEK	LVEVNGENVEK	2	LVEVNGENVEK2	123495	107378	93727.1
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	LVEVNGENVEKETHQQVVSR	LVEVNGENVEKETHQQVVSR	3	LVEVNGENVEKETHQQVVSR3	21599.2	14296.7	8543.35
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	LVEVNGENVEKETHQQVVSR	LVEVNGENVEKETHQQVVSR	4	LVEVNGENVEKETHQQVVSR4	26924.7	36389.9	32579.3
A0A0G2K1D2	A0A0G2K1D2	A0A0G2K1D2_RAT	Rap1gds1	Rap1 GTPase-GDP dissociation stimulator 1	1	LVEWCEAK	LVEWC(UniMod:4)EAK	2	LVEWC(UniMod:4)EAK2	2914.26	6481.09	
A0A8I6A7R6	A0A8I6A7R6	A0A8I6A7R6_RAT	ENSRNOG00000065040	Ig-like domain-containing protein	1	LVEYGGGLVQPGASLR	LVEYGGGLVQPGASLR	2	LVEYGGGLVQPGASLR2	2.7071e+06	2.94622e+06	3.11766e+06
A0A8I6A7R6	A0A8I6A7R6	A0A8I6A7R6_RAT	ENSRNOG00000065040	Ig-like domain-containing protein	1	LVEYGGGLVQPGASLR	LVEYGGGLVQPGASLR	3	LVEYGGGLVQPGASLR3	1.0142e+06	976565	1.23331e+06
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	LVEYLDIGFDTTR	LVEYLDIGFDTTR	2	LVEYLDIGFDTTR2			5515.29
P09606	P09606	GLNA_RAT	Glul	Glutamine synthetase	1	LVFCEVFK	LVFC(UniMod:4)EVFK	2	LVFC(UniMod:4)EVFK2	8570.37	44305.2	8310.43
P48037	P48037	ANXA6_RAT	Anxa6	Annexin A6	1	LVFDEYLK	LVFDEYLK	2	LVFDEYLK2	9316.62	6589.34	4608.03
D3ZQI6	D3ZQI6	D3ZQI6_RAT	Xpo4	Exportin 4	1	LVFDMLVLQK	LVFDMLVLQK	2	LVFDMLVLQK2	6454.03	6896.96	10529.1
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	LVFGFLNGR	LVFGFLNGR	2	LVFGFLNGR2	73698.4	58592.5	67824.6
Q9Z254	Q9Z254	GIPC1_RAT	Gipc1	PDZ domain-containing protein GIPC1	1	LVFHTQLAHGSPTGR	LVFHTQLAHGSPTGR	3	LVFHTQLAHGSPTGR3	13439.5	15083.9	6217.21
Q9Z254	Q9Z254	GIPC1_RAT	Gipc1	PDZ domain-containing protein GIPC1	1	LVFHTQLAHGSPTGR	LVFHTQLAHGSPTGR	4	LVFHTQLAHGSPTGR4	27941.1	13370.7	16613.8
Q9WVB1	A0A0G2JT78;Q9WVB1	RAB6A_RAT	Rab6a	Ras-related protein Rab-6A	0	LVFLGEQSVGK	LVFLGEQSVGK	2	LVFLGEQSVGK2	677810	598401	725692
Q5HZY2	Q5HZY2	SAR1B_RAT	Sar1b	GTP-binding protein SAR1b	1	LVFLGLDNAGK	LVFLGLDNAGK	2	LVFLGLDNAGK2	566524	588498	675364
D4A2G6	D4A2G6	D4A2G6_RAT	Thbs2	Thrombospondin 2	1	LVFNPDQEDSDGDGRGDICK	LVFNPDQEDSDGDGRGDIC(UniMod:4)K	3	LVFNPDQEDSDGDGRGDIC(UniMod:4)K3	46242.5	37589.5	40395.6
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	LVFPAATSGR	LVFPAATSGR	2	LVFPAATSGR2	212306	272812	240546
A0A8I6A6G8	A0A8I6A6G8	A0A8I6A6G8_RAT	Hm13	Histocompatibility minor 13	1	LVFPQDLLEK	LVFPQDLLEK	2	LVFPQDLLEK2	53967.9	67099.7	81041.9
G3V8W9	G3V8W9	G3V8W9_RAT	Tstd3	Thiosulfate sulfurtransferase like domain containing 3	1	LVFSCLAGVR	LVFSC(UniMod:4)LAGVR	2	LVFSC(UniMod:4)LAGVR2	18346.4	12821.1	8335.83
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	LVFSMVSR	LVFSMVSR	2	LVFSMVSR2	38551.7	35878.3	47808.2
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	LVFSNVNLK	LVFSNVNLK	2	LVFSNVNLK2	123098	121567	127732
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	LVFTSVSK	LVFTSVSK	2	LVFTSVSK2	155186	199028	221306
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	LVFVHSAQGNEFWSALLEK	LVFVHSAQGNEFWSALLEK	3	LVFVHSAQGNEFWSALLEK3	69862.4	72498.3	79573.7
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	LVFVNPPFLLPR	LVFVNPPFLLPR	2	LVFVNPPFLLPR2	13125.4	23065	17579.6
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	LVFWQFDVEPSEGCFYDYVK	LVFWQFDVEPSEGC(UniMod:4)FYDYVK	3	LVFWQFDVEPSEGC(UniMod:4)FYDYVK3	75119.7	43388.1	47352.6
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	LVGAIVYYDGQHNDAR	LVGAIVYYDGQHNDAR	2	LVGAIVYYDGQHNDAR2	20598.2	13677.3	26780.4
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	LVGAIVYYDGQHNDAR	LVGAIVYYDGQHNDAR	3	LVGAIVYYDGQHNDAR3	155988	156685	183723
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	LVGAIVYYDGQHNDAR	LVGAIVYYDGQHNDAR	4	LVGAIVYYDGQHNDAR4			3696.53
Q63488	Q63488	S20A2_RAT	Slc20a2	Sodium-dependent phosphate transporter 2	1	LVGDTVSYSK	LVGDTVSYSK	2	LVGDTVSYSK2	22097.1	31071.8	31319.8
D4A1Y5	D4A1Y5	D4A1Y5_RAT	Mthfd2	methenyltetrahydrofolate cyclohydrolase	1	LVGDVDFEGVK	LVGDVDFEGVK	2	LVGDVDFEGVK2	64602.7	67480.7	60223.9
D4A1Y5	D4A1Y5	D4A1Y5_RAT	Mthfd2	methenyltetrahydrofolate cyclohydrolase	1	LVGDVDFEGVKK	LVGDVDFEGVKK	3	LVGDVDFEGVKK3	38681.5	27121.2	40274.3
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	LVGEALLESNTVIDHVYCSPSLR	LVGEALLESNTVIDHVYC(UniMod:4)SPSLR	3	LVGEALLESNTVIDHVYC(UniMod:4)SPSLR3	326045	367836	350044
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	LVGEALLESNTVIDHVYCSPSLR	LVGEALLESNTVIDHVYC(UniMod:4)SPSLR	4	LVGEALLESNTVIDHVYC(UniMod:4)SPSLR4	5103.56	6013.63	4690.88
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	LVGEATISCWYSQWTPAAPQCK	LVGEATISC(UniMod:4)WYSQWTPAAPQC(UniMod:4)K	3	LVGEATISC(UniMod:4)WYSQWTPAAPQC(UniMod:4)K3	45267.7	58381.7	58925.8
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	LVGEATISCWYSQWTPAAPQCK	LVGEATISC(UniMod:4)WYSQWTPAAPQC(UniMod:4)K	4	LVGEATISC(UniMod:4)WYSQWTPAAPQC(UniMod:4)K4	116329	121389	137377
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	LVGEFLEVTCISPTFICDHPQIMSPLAK	LVGEFLEVTC(UniMod:4)ISPTFIC(UniMod:4)DHPQIMSPLAK	4	LVGEFLEVTC(UniMod:4)ISPTFIC(UniMod:4)DHPQIMSPLAK4	21723.1	9589.91	11430.2
B0BN85	B0BN85	SGT1_RAT	Sugt1	Protein SGT1 homolog	1	LVGEIKEEEKNEK	LVGEIKEEEKNEK	3	LVGEIKEEEKNEK3	17718	12726.2	
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	LVGEIMQETGTR	LVGEIMQETGTR	2	LVGEIMQETGTR2	39274.3	33150.8	37298.4
P51792	P51792	CLCN3_RAT	Clcn3	H(+)/Cl(-) exchange transporter 3	1	LVGFALR	LVGFALR	2	LVGFALR2	33540.2	90852.6	57865.8
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LVGFIDDTVEWIK	LVGFIDDTVEWIK	2	LVGFIDDTVEWIK2	65359.8	56363.4	43624.6
Q8K1Q0	Q8K1Q0	NMT1_RAT	Nmt1	Glycylpeptide N-tetradecanoyltransferase 1	1	LVGFISAIPANIHIYDTEKK	LVGFISAIPANIHIYDTEKK	3	LVGFISAIPANIHIYDTEKK3	2264.73		
A0A8I5ZWZ4	A0A8I5ZWZ4	A0A8I5ZWZ4_RAT	Nmt2	Glycylpeptide N-tetradecanoyltransferase	1	LVGFISAIPANIR	LVGFISAIPANIR	2	LVGFISAIPANIR2	8519.14	3821.79	8454.61
A0A8I5ZWZ4	A0A8I5ZWZ4	A0A8I5ZWZ4_RAT	Nmt2	Glycylpeptide N-tetradecanoyltransferase	1	LVGFISAIPANIR	LVGFISAIPANIR	3	LVGFISAIPANIR3	3708.04	5575.67	
A0A8I6ASK6	A0A8I6ASK6	A0A8I6ASK6_RAT	Fcrl1	Fc receptor-like 1	1	LVGGDTTCSGR	LVGGDTTC(UniMod:4)SGR	2	LVGGDTTC(UniMod:4)SGR2	4.62004e+06	4.17173e+06	4.50269e+06
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	LVGGKDFEQPLAISR	LVGGKDFEQPLAISR	3	LVGGKDFEQPLAISR3	2610.13	5907.32	2412.98
P07872	P07872	ACOX1_RAT	Acox1	Peroxisomal acyl-coenzyme A oxidase 1	1	LVGGMVSYLNDLPSQR	LVGGMVSYLNDLPSQR	2	LVGGMVSYLNDLPSQR2	7284.07	6921.95	7915.49
P07872	P07872	ACOX1_RAT	Acox1	Peroxisomal acyl-coenzyme A oxidase 1	1	LVGGMVSYLNDLPSQR	LVGGMVSYLNDLPSQR	3	LVGGMVSYLNDLPSQR3	7466.51	12201.9	8845.13
P13086	P13086	SUCA_RAT	Suclg1	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial	1	LVGGTTPGK	LVGGTTPGK	2	LVGGTTPGK2	500617	480945	536726
Q566C7	Q566C7	NUDT3_RAT	Nudt3	Diphosphoinositol polyphosphate phosphohydrolase 1	1	LVGIFENQER	LVGIFENQER	2	LVGIFENQER2	26674.6	7525.48	16692.8
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	LVGIISSR	LVGIISSR	2	LVGIISSR2	154156	92836.3	140333
A0A8I6AEY8	A0A8I6AEY8	A0A8I6AEY8_RAT	Vps8	VPS8 subunit of CORVET complex	1	LVGITPQVMK	LVGITPQVMK	2	LVGITPQVMK2	7013.32		
D3ZLZ7	D3ZLZ7	IMDH1_RAT	Impdh1	Inosine-5'-monophosphate dehydrogenase 1	1	LVGIVTSR	LVGIVTSR	2	LVGIVTSR2	33733.9	30799.2	26283.1
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	LVGLDGTVIHMLPPPPVQR	LVGLDGTVIHMLPPPPVQR	3	LVGLDGTVIHMLPPPPVQR3	24544.7	24052	13472
A0A8I6AR22	A0A8I6AR22	A0A8I6AR22_RAT	Zdhhc20	Palmitoyltransferase	1	LVGMDPEQASIANQGEYIR	LVGMDPEQASIANQGEYIR	3	LVGMDPEQASIANQGEYIR3	17511.1	22080.1	21353.5
Q06000	Q06000	LIPL_RAT	Lpl	Lipoprotein lipase	1	LVGNDVAR	LVGNDVAR	2	LVGNDVAR2	141010	171119	149795
Q9JHW1	Q9JHW1	CBPD_RAT	Cpd	Carboxypeptidase D	1	LVGNMHGDETVSR	LVGNMHGDETVSR	3	LVGNMHGDETVSR3	17722.8	19422.4	10396.8
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	LVGPEEALSSGEAR	LVGPEEALSSGEAR	2	LVGPEEALSSGEAR2	43113.2	51467.9	16393.9
O70351	O70351	HCD2_RAT	Hsd17b10	3-hydroxyacyl-CoA dehydrogenase type-2	1	LVGQGATAVLLDVPNSEGETEAK	LVGQGATAVLLDVPNSEGETEAK	3	LVGQGATAVLLDVPNSEGETEAK3	50420.2	47907.6	42946.9
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	LVGQSIIAYLQK	LVGQSIIAYLQK	2	LVGQSIIAYLQK2	375613	423740	384007
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	LVGQSIIAYLQK	LVGQSIIAYLQK	3	LVGQSIIAYLQK3	76191.3	88121.6	80852.6
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	LVGSEQAPGR	LVGSEQAPGR	2	LVGSEQAPGR2	72704.9	70239.5	60847.6
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	LVGSGLHK	LVGSGLHK	2	LVGSGLHK2	209289	213906	188820
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	LVGSQEELASWGHEYVR	LVGSQEELASWGHEYVR	3	LVGSQEELASWGHEYVR3	293171	279104	293973
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	LVGTAHLK	LVGTAHLK	2	LVGTAHLK2	35719.4	43460.3	33987.2
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	LVGTPGAELLK	LVGTPGAELLK	2	LVGTPGAELLK2	606634	577988	563043
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	LVGTPGAELLKK	LVGTPGAELLKK	3	LVGTPGAELLKK3	435341	477368	428962
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	LVGTVLNGYLCLR	LVGTVLNGYLC(UniMod:4)LR	2	LVGTVLNGYLC(UniMod:4)LR2	10248.4		7478.09
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	LVGVLVHSGQASGGHYYSYIIQR	LVGVLVHSGQASGGHYYSYIIQR	4	LVGVLVHSGQASGGHYYSYIIQR4	54006	71384.8	45888.5
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	LVHANFGTK	LVHANFGTK	2	LVHANFGTK2	16657.3	9780.58	
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	LVHDKELAAEDEQVFLMK	LVHDKELAAEDEQVFLMK	3	LVHDKELAAEDEQVFLMK3	2912.75	5475.57	10296.7
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	LVHDKELAAEDEQVFLMK	LVHDKELAAEDEQVFLMK	4	LVHDKELAAEDEQVFLMK4	20077.9	19134	16434.3
B1WC42	B1WC42	B1WC42_RAT	Trip6	Thyroid hormone receptor interactor 6	1	LVHDMNHPPSGEYFGR	LVHDMNHPPSGEYFGR	4	LVHDMNHPPSGEYFGR4	4893.31	5660.69	10410.1
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	LVHEAGLR	LVHEAGLR	2	LVHEAGLR2	10857.3	8970.68	6789.92
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	LVHEGPLTWR	LVHEGPLTWR	2	LVHEGPLTWR2	1415.41	3858.78	
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	LVHEGPLTWR	LVHEGPLTWR	3	LVHEGPLTWR3	68519.8	76082.3	81827.5
Q66HG5	Q66HG5	TM9S2_RAT	Tm9sf2	Transmembrane 9 superfamily member 2	1	LVHGDIFRPPR	LVHGDIFRPPR	3	LVHGDIFRPPR3	20432.7	17303.9	
D3ZPP3	D3ZPP3	D3ZPP3_RAT	Psd4	Pleckstrin and Sec7 domain containing 4	1	LVHGEASQAPASSR	LVHGEASQAPASSR	3	LVHGEASQAPASSR3			1854.56
Q5XIP9	Q5XIP9	TMM43_RAT	Tmem43	Transmembrane protein 43	1	LVHIIGALR	LVHIIGALR	2	LVHIIGALR2	10594.1	8734.8	8158.86
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	LVHILNMVTGTIHTYPVMEDESLQSLK	LVHILNMVTGTIHTYPVMEDESLQSLK	4	LVHILNMVTGTIHTYPVMEDESLQSLK4		7797.87	2102.07
Q5M9G9	Q5M9G9	FAKD4_RAT	Tbrg4	FAST kinase domain-containing protein 4	1	LVHINSTALLEYPEYK	LVHINSTALLEYPEYK	3	LVHINSTALLEYPEYK3	9594.42	8843.67	15888.1
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	LVHLQTLVLNGNPLLHAQLR	LVHLQTLVLNGNPLLHAQLR	3	LVHLQTLVLNGNPLLHAQLR3	8701.75	16650.5	7262.91
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	LVHLQTLVLNGNPLLHAQLR	LVHLQTLVLNGNPLLHAQLR	4	LVHLQTLVLNGNPLLHAQLR4	86851.4	123981	103581
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	LVHLWSSETHQPVWSR	LVHLWSSETHQPVWSR	3	LVHLWSSETHQPVWSR3	26472.6	10822.8	8820.96
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	LVHLWSSETHQPVWSR	LVHLWSSETHQPVWSR	4	LVHLWSSETHQPVWSR4	93944.9	103063	103560
D3ZME7	D3ZME7	D3ZME7_RAT	Hscb	HscB mitochondrial iron-sulfur cluster co-chaperone	1	LVHPDFFSQK	LVHPDFFSQK	3	LVHPDFFSQK3	8883.87	8035.22	6924.27
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	LVHPTDK	LVHPTDK	1	LVHPTDK1			1668.81
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	LVHPTDK	LVHPTDK	2	LVHPTDK2			58263.4
D3ZCQ2	D3ZCQ2	D3ZCQ2_RAT	Alg11	GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase	1	LVHPVQFVFLR	LVHPVQFVFLR	2	LVHPVQFVFLR2	4655.03	6110.34	6223.86
D3ZCQ2	D3ZCQ2	D3ZCQ2_RAT	Alg11	GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase	1	LVHPVQFVFLR	LVHPVQFVFLR	3	LVHPVQFVFLR3	7826.72		8243.95
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	LVHQNSASDDAEASMISK	LVHQNSASDDAEASMISK	2	LVHQNSASDDAEASMISK2	6166.18		
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	LVHQNSASDDAEASMISK	LVHQNSASDDAEASMISK	3	LVHQNSASDDAEASMISK3	24842.8	29680.8	22761.5
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	LVHSGPGK	LVHSGPGK	1	LVHSGPGK1			2951.36
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	LVHSGPGK	LVHSGPGK	2	LVHSGPGK2			12625.6
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	LVHSNDGTQTAR	LVHSNDGTQTAR	2	LVHSNDGTQTAR2			21031.2
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	LVHSNDGTQTAR	LVHSNDGTQTAR	3	LVHSNDGTQTAR3			12661.4
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	LVHTYEEHSEQVNCCHFTNK	LVHTYEEHSEQVNC(UniMod:4)C(UniMod:4)HFTNK	4	LVHTYEEHSEQVNC(UniMod:4)C(UniMod:4)HFTNK4	843.477	2413.55	3661.62
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	LVHVLSLCGQEVGLSK	LVHVLSLC(UniMod:4)GQEVGLSK	3	LVHVLSLC(UniMod:4)GQEVGLSK3	16311.4	17882.6	18842.6
Q68FQ9	Q68FQ9	Q68FQ9_RAT	Lancl2	LanC lantibiotic synthetase component C-like 2 (Bacterial)	1	LVHWCHGAPGVIHMLLR	LVHWC(UniMod:4)HGAPGVIHMLLR	4	LVHWC(UniMod:4)HGAPGVIHMLLR4	11041.6	12447.4	14379.6
P15651	P15651	ACADS_RAT	Acads	Short-chain specific acyl-CoA dehydrogenase, mitochondrial	1	LVIAGHLLR	LVIAGHLLR	2	LVIAGHLLR2	1608.73	2559.92	
A0A8I5ZYZ8	A0A8I5ZYZ8	A0A8I5ZYZ8_RAT	Ube2m	Ubiquitin-conjugating enzyme E2M	1	LVICPDEGFYK	LVIC(UniMod:4)PDEGFYK	2	LVIC(UniMod:4)PDEGFYK2	50608.9	50272	56139.2
Q8VHK7	Q8VHK7	HDGF_RAT	Hdgf	Hepatoma-derived growth factor	1	LVIDEPAKEK	LVIDEPAKEK	3	LVIDEPAKEK3	13530.1	28107.3	20432.9
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	LVIDGLR	LVIDGLR	2	LVIDGLR2	54524.2	65922.2	57717.9
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	LVIDQIDNGFFSPNQPDLFK	LVIDQIDNGFFSPNQPDLFK	3	LVIDQIDNGFFSPNQPDLFK3	2424.3	4350.73	1217.67
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	LVIEEAER	LVIEEAER	2	LVIEEAER2	776142	737854	738129
Q9QWE9	Q9QWE9	GGT5_RAT	Ggt5	Glutathione hydrolase 5 proenzyme	1	LVIGGAGGELIISAVTQAIVNK	LVIGGAGGELIISAVTQAIVNK	3	LVIGGAGGELIISAVTQAIVNK3	3683.37		
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	LVIHNDGTK	LVIHNDGTK	2	LVIHNDGTK2	8761.96	4321.17	
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	LVIIEGDLER	LVIIEGDLER	2	LVIIEGDLER2	529486	434942	381461
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	LVIIEGDLERTEER	LVIIEGDLERTEER	3	LVIIEGDLERTEER3	687827	752012	794546
P04692	P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	1	LVIIESDLER	LVIIESDLER	2	LVIIESDLER2	101186	95413.5	4.82722e+06
P04692	P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	1	LVIIESDLERAEER	LVIIESDLERAEER	2	LVIIESDLERAEER2	2894.1	2405.66	1128.56
P04692	P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	1	LVIIESDLERAEER	LVIIESDLERAEER	3	LVIIESDLERAEER3	1.3977e+06	1.0085e+06	1.152e+06
P04642	P04642;A0A8I6ASS6;P19629;A0A8I6GK09	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	LVIITAGAR	LVIITAGAR	2	LVIITAGAR2	1.94444e+06	1.50539e+06	1.80534e+06
P62890	P62890	RL30_RAT	Rpl30	Large ribosomal subunit protein eL30	1	LVILANNCPALR	LVILANNC(UniMod:4)PALR	2	LVILANNC(UniMod:4)PALR2	28653	22469.3	23135
B5DEZ6	B5DEZ6	B5DEZ6_RAT	Gnpda2	Glucosamine-6-phosphate isomerase	1	LVILDNYDLASEWAAK	LVILDNYDLASEWAAK	2	LVILDNYDLASEWAAK2	4156.24		
Q5XIL2	Q5XIL2	P4K2B_RAT	Pi4k2b	Phosphatidylinositol 4-kinase type 2-beta	1	LVILDYIIR	LVILDYIIR	2	LVILDYIIR2	12347.2	11748.1	11291.7
P09495	P58775;P09495;A0A8I5YC74	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	0	LVILEGELER	LVILEGELER	2	LVILEGELER2	686060	616290	588548
P09495	P58775;P09495;A0A8I5YC74	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	0	LVILEGELER	LVILEGELER	3	LVILEGELER3	4648.22	6983.02	5926.47
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	LVILEGELERAEER	LVILEGELERAEER	2	LVILEGELERAEER2	17517.1	14308.3	9201.96
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	LVILEGELERAEER	LVILEGELERAEER	3	LVILEGELERAEER3	8.91785e+06	8.10176e+06	7.99264e+06
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	LVILEGELERAEERAEVSELK	LVILEGELERAEERAEVSELK	3	LVILEGELERAEERAEVSELK3	5659.11	2603.94	6455.25
P58775	P58775;A0A8I5YC74	TPM2_RAT	Tpm2	Tropomyosin beta chain	0	LVILEGELERSEER	LVILEGELERSEER	3	LVILEGELERSEER3	36808.7	27418.7	
D3ZW19	D3ZW19	D3ZW19_RAT	Lingo3	Leucine rich repeat and Ig domain containing 3	1	LVILLDFSFQDLR	LVILLDFSFQDLR	2	LVILLDFSFQDLR2	15062.8	6351.33	4328.46
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	LVILVETEK	LVILVETEK	2	LVILVETEK2	10486.2		2198.17
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	LVILVETEKEK	LVILVETEKEK	2	LVILVETEKEK2	6697.53		6521.71
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	LVILVETEKEK	LVILVETEKEK	3	LVILVETEKEK3	18865.9	12876.6	16556.7
A0A0G2K059	A0A0G2K059	A0A0G2K059_RAT	Mcu	Calcium uniporter protein	1	LVINDLTYHVRPPK	LVINDLTYHVRPPK	3	LVINDLTYHVRPPK3	161858	159828	145345
A0A0G2K059	A0A0G2K059	A0A0G2K059_RAT	Mcu	Calcium uniporter protein	1	LVINDLTYHVRPPK	LVINDLTYHVRPPK	4	LVINDLTYHVRPPK4	193760	145000	222604
P04797	E9PTV9;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	LVINGKPITIFQER	LVINGKPITIFQER	2	LVINGKPITIFQER2	37789.7	41101.8	37676.9
P04797	E9PTV9;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	LVINGKPITIFQER	LVINGKPITIFQER	3	LVINGKPITIFQER3	1.01209e+06	840527	848142
P04797	E9PTV9;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	LVINGKPITIFQERDPANIK	LVINGKPITIFQERDPANIK	3	LVINGKPITIFQERDPANIK3	80583.5	81130.9	101330
P04797	E9PTV9;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	LVINGKPITIFQERDPANIK	LVINGKPITIFQERDPANIK	4	LVINGKPITIFQERDPANIK4	326087	400323	446721
F1LUQ0	F1LUQ0	F1LUQ0_RAT	Mcub	Calcium uniporter regulatory subunit MCUb	1	LVINNLPYDIR	LVINNLPYDIR	2	LVINNLPYDIR2	15666.8	12201.7	14751.7
P26051	P26051	CD44_RAT	Cd44	CD44 antigen	1	LVINSGNGTVEDR	LVINSGNGTVEDR	2	LVINSGNGTVEDR2	342429	351497	344885
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	LVIPILEAHR	LVIPILEAHR	3	LVIPILEAHR3	27172.5	28076.8	19894.4
A0A8I6GH88	A0A8I6GH88	A0A8I6GH88_RAT	Fkbp2	peptidylprolyl isomerase	1	LVIPSELGYGER	LVIPSELGYGER	2	LVIPSELGYGER2	118033	100054	124241
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	LVIPSRDPTDESK	LVIPSRDPTDESK	3	LVIPSRDPTDESK3	41015.9	29945	27129
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	LVIQDANVSAMYK	LVIQDANVSAMYK	2	LVIQDANVSAMYK2	240456	244637	254163
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	LVIQDANVSAMYK	LVIQDANVSAMYK	3	LVIQDANVSAMYK3	6321.31	12967.9	17816.3
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	LVIQTQGR	LVIQTQGR	2	LVIQTQGR2	21648.2	20227.3	9310.44
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	LVISASWAK	LVISASWAK	2	LVISASWAK2	23784.9	37309.9	38289.6
Q8VIL3	Q8VIL3	ZWINT_RAT	Zwint	ZW10 interactor	1	LVISESK	LVISESK	2	LVISESK2	48478.8	66936.3	84449.3
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	LVISESYDTYINR	LVISESYDTYINR	2	LVISESYDTYINR2	102963	106087	73798.5
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	LVISESYDTYINR	LVISESYDTYINR	3	LVISESYDTYINR3	18964.2	24939	25311.5
D3ZUB7	D3ZUB7	D3ZUB7_RAT	Anapc4	Anaphase-promoting complex subunit 4	1	LVISHLQSGSESLLYHLSELK	LVISHLQSGSESLLYHLSELK	4	LVISHLQSGSESLLYHLSELK4			1092.31
P61589	P61589;Q5XIM3;A0A8I6AN62	RHOA_RAT	Rhoa	Transforming protein RhoA	0	LVIVGDGACGK	LVIVGDGAC(UniMod:4)GK	2	LVIVGDGAC(UniMod:4)GK2	1.67984e+06	1.6009e+06	1.79721e+06
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	LVIYAGPNTNSR	LVIYAGPNTNSR	2	LVIYAGPNTNSR2	5289.09	4555.48	8987.05
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	LVIYLEHNLEK	LVIYLEHNLEK	2	LVIYLEHNLEK2	7177.57	5283.1	5648.27
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	LVIYLEHNLEK	LVIYLEHNLEK	3	LVIYLEHNLEK3	41467.6	38600.3	29733.6
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	LVKEEVFWR	LVKEEVFWR	3	LVKEEVFWR3	3023.18	10647.4	13166.8
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	LVKGQDLSSPAFR	LVKGQDLSSPAFR	3	LVKGQDLSSPAFR3	7847.87	8301.92	15287.1
Q6AYD3	Q6AYD3	PA2G4_RAT	Pa2g4	Proliferation-associated protein 2G4	1	LVKPGNQNTQVTEAWNK	LVKPGNQNTQVTEAWNK	3	LVKPGNQNTQVTEAWNK3	29985.5	22479.3	17055.6
D4A3E2	D4A3E2	D4A3E2_RAT	Npepl1	Aminopeptidase-like 1	1	LVLADGVSYACK	LVLADGVSYAC(UniMod:4)K	2	LVLADGVSYAC(UniMod:4)K2	13996.4	15985.1	14858.5
Q68FT3	Q68FT3	PYRD2_RAT	Pyroxd2	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2	1	LVLAIDPLLDAAPVDIAALQHGSLLQR	LVLAIDPLLDAAPVDIAALQHGSLLQR	3	LVLAIDPLLDAAPVDIAALQHGSLLQR3	9036.22	7490.42	6398.46
P01015	P01015	ANGT_RAT	Agt	Angiotensinogen	1	LVLATEK	LVLATEK	1	LVLATEK1	4251.5	2150.99	1394.7
P01015	P01015	ANGT_RAT	Agt	Angiotensinogen	1	LVLATEK	LVLATEK	2	LVLATEK2	547864	559666	537051
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	LVLCMELANGKPQMR	LVLC(UniMod:4)MELANGKPQMR	3	LVLC(UniMod:4)MELANGKPQMR3	170432	154423	120293
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	LVLCQSPPLIPFGVPASSGALHFGSTVK	LVLC(UniMod:4)QSPPLIPFGVPASSGALHFGSTVK	3	LVLC(UniMod:4)QSPPLIPFGVPASSGALHFGSTVK3	6250.36	12580.3	2041.94
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	LVLCQSPPLIPFGVPASSGALHFGSTVK	LVLC(UniMod:4)QSPPLIPFGVPASSGALHFGSTVK	4	LVLC(UniMod:4)QSPPLIPFGVPASSGALHFGSTVK4	3469.67	1983.71	
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	LVLCYEIQR	LVLC(UniMod:4)YEIQR	2	LVLC(UniMod:4)YEIQR2	18828.1	33603.5	26428
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	LVLDAALALQEYGCQVK	LVLDAALALQEYGC(UniMod:4)QVK	2	LVLDAALALQEYGC(UniMod:4)QVK2	10425	15837.3	13984.8
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	LVLDAALALQEYGCQVK	LVLDAALALQEYGC(UniMod:4)QVK	3	LVLDAALALQEYGC(UniMod:4)QVK3	3562.23	10052.2	9298.81
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	LVLDEVHTASGTAPGALK	LVLDEVHTASGTAPGALK	3	LVLDEVHTASGTAPGALK3	74926.6	51959.6	61750.7
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	LVLDPQAPK	LVLDPQAPK	2	LVLDPQAPK2	43503.5	33004.7	42167.7
D3ZTR1	D3ZTR1	D3ZTR1_RAT	Mrps17	Mitochondrial ribosomal protein S17	1	LVLDPYLLK	LVLDPYLLK	2	LVLDPYLLK2		6546.48	15155.5
F1LNF0	F1LNF0	F1LNF0_RAT	Myh14	Myosin heavy chain 14	1	LVLDQLR	LVLDQLR	2	LVLDQLR2	951756	908644	826569
Q99N37	Q99N37	RHG17_RAT	Arhgap17	Rho GTPase-activating protein 17	1	LVLDWDSVR	LVLDWDSVR	2	LVLDWDSVR2	41134.3	36867.3	
Q5U2Y0	Q5U2Y0	WIPI4_RAT	Wdr45	WD repeat domain phosphoinositide-interacting protein 4	1	LVLEFTFTKPVLAVR	LVLEFTFTKPVLAVR	3	LVLEFTFTKPVLAVR3	6682.29	7582.76	1325.58
Q641Y2	Q641Y2	NDUS2_RAT	Ndufs2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	1	LVLELSGEMVR	LVLELSGEMVR	2	LVLELSGEMVR2	44443.1	33266.7	49034.2
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	LVLEPNDADIALLK	LVLEPNDADIALLK	2	LVLEPNDADIALLK2	953157	869137	1.03834e+06
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	LVLEPNDADIALLK	LVLEPNDADIALLK	3	LVLEPNDADIALLK3	77971.8	62830.8	62693.5
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	LVLEQVVTSIASVADTAEEK	LVLEQVVTSIASVADTAEEK	3	LVLEQVVTSIASVADTAEEK3	50302.4	39925.3	50984.5
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	LVLEVAQHLGESTVR	LVLEVAQHLGESTVR	2	LVLEVAQHLGESTVR2	54255.1	40969.6	36514.6
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	LVLEVAQHLGESTVR	LVLEVAQHLGESTVR	3	LVLEVAQHLGESTVR3	1.89632e+06	1.80713e+06	1.96979e+06
B5DEY9	B5DEY9	B5DEY9_RAT	Csgalnact1	Hexosyltransferase	1	LVLFRPFGPIMK	LVLFRPFGPIMK	3	LVLFRPFGPIMK3	30105.1	31078.1	30426
E9PTA5	E9PTA5	E9PTA5_RAT	Pign	GPI ethanolamine phosphate transferase 1	1	LVLFVADGLR	LVLFVADGLR	2	LVLFVADGLR2	23096.2	17166.2	25315.7
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LVLGYILLEDPQLHAQAYVK	LVLGYILLEDPQLHAQAYVK	3	LVLGYILLEDPQLHAQAYVK3		7250.77	
D3ZCQ2	D3ZCQ2	D3ZCQ2_RAT	Alg11	GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase	1	LVLIGGCR	LVLIGGC(UniMod:4)R	2	LVLIGGC(UniMod:4)R2	19163.1	22231.7	24559.4
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	LVLIGSNHSLPFLK	LVLIGSNHSLPFLK	3	LVLIGSNHSLPFLK3	49674.8	47756.6	47463.8
F1LZJ4	F1LZJ4	F1LZJ4_RAT	Hyi	Putative hydroxypyruvate isomerase	1	LVLINTPR	LVLINTPR	2	LVLINTPR2	15760.9	13929.1	19689.8
F1LMQ3	F1LMQ3;A0A8I6ADL0	F1LMQ3_RAT	Psmd8	26S proteasome non-ATPase regulatory subunit 8	0	LVLLELNFLPTTGTK	LVLLELNFLPTTGTK	2	LVLLELNFLPTTGTK2	24935.7	21804.7	17943.6
F1LMQ3	F1LMQ3;A0A8I6ADL0	F1LMQ3_RAT	Psmd8	26S proteasome non-ATPase regulatory subunit 8	0	LVLLELNFLPTTGTK	LVLLELNFLPTTGTK	3	LVLLELNFLPTTGTK3	12838.8	9864.75	16378.5
M0RC99	A1L1J8;M0RC99;B0BNK1	RAB5A_RAT	Rab5a	Ras-related protein Rab-5A	0	LVLLGESAVGK	LVLLGESAVGK	2	LVLLGESAVGK2	552125	541485	568212
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	LVLLNAVYLSAK	LVLLNAVYLSAK	2	LVLLNAVYLSAK2	3.10203e+06	2.6797e+06	2.20336e+06
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	LVLLNAVYLSAK	LVLLNAVYLSAK	3	LVLLNAVYLSAK3	43659.5	45340.4	42036.9
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	LVLLNLQGNSLCQEEGIQER	LVLLNLQGNSLC(UniMod:4)QEEGIQER	3	LVLLNLQGNSLC(UniMod:4)QEEGIQER3	4670.99		8418.27
Q63632	Q63632	S12A4_RAT	Slc12a4	Solute carrier family 12 member 4	1	LVLLNMPGPPK	LVLLNMPGPPK	2	LVLLNMPGPPK2	14571.5	17333.6	7287
G3V6N7	Q63633;G3V6N7	G3V6N7_RAT	Slc12a6	Solute carrier family 12, member 6	0	LVLLNMPGPPR	LVLLNMPGPPR	2	LVLLNMPGPPR2	17227	23496.8	23494.4
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	LVLLSVLK	LVLLSVLK	2	LVLLSVLK2	12613.4	8460.71	8373.23
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	LVLLSVLKEPVSR	LVLLSVLKEPVSR	3	LVLLSVLKEPVSR3	13510.6	9780.71	16519.4
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	LVLMQPEK	LVLMQPEK	2	LVLMQPEK2	2.29432e+06	2.34494e+06	1.96861e+06
Q5BJS0	Q5BJS0	DHX30_RAT	Dhx30	ATP-dependent RNA helicase DHX30	1	LVLMSATGDNER	LVLMSATGDNER	2	LVLMSATGDNER2	2584.13		4336.66
P31430	P31430	DPEP1_RAT	Dpep1	Dipeptidase 1	1	LVLNEMNR	LVLNEMNR	2	LVLNEMNR2	8708.55	12685.8	9906.85
G3V8G1	G3V8G1	G3V8G1_RAT	Agtpbp1	tubulin-glutamate carboxypeptidase	1	LVLPCLQLLR	LVLPC(UniMod:4)LQLLR	2	LVLPC(UniMod:4)LQLLR2	2722.33		
P86182	P86182	CCD22_RAT	Ccdc22	Coiled-coil domain-containing protein 22	1	LVLPELNCR	LVLPELNC(UniMod:4)R	2	LVLPELNC(UniMod:4)R2	28002.4	35604.3	27768.1
Q6P7R8	Q6P7R8	DHB12_RAT	Hsd17b12	Very-long-chain 3-oxoacyl-CoA reductase	1	LVLPGMVER	LVLPGMVER	2	LVLPGMVER2	205274	181144	192297
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	LVLPMIK	LVLPMIK	2	LVLPMIK2	199071	227138	262832
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	LVLPPGTEELQAQLEK	LVLPPGTEELQAQLEK	2	LVLPPGTEELQAQLEK2	1.97014e+06	1.96915e+06	1.83743e+06
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	LVLPPGTEELQAQLEK	LVLPPGTEELQAQLEK	3	LVLPPGTEELQAQLEK3	139054	156727	145323
D4AE24	D4AE24	D4AE24_RAT	Rps6kb2	Ribosomal protein S6 kinase	1	LVLPPYLTPDAR	LVLPPYLTPDAR	2	LVLPPYLTPDAR2	16856.1	26269.3	18720.8
A0A8J8XQI9	A0A8J8XQI9	A0A8J8XQI9_RAT	Bche	Carboxylic ester hydrolase	1	LVLPSDSIR	LVLPSDSIR	2	LVLPSDSIR2	22490.9	15936.6	17171.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LVLPSLQLPVFHIPR	LVLPSLQLPVFHIPR	2	LVLPSLQLPVFHIPR2	17295.3	16022.3	15831
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LVLPSLQLPVFHIPR	LVLPSLQLPVFHIPR	3	LVLPSLQLPVFHIPR3	1.40843e+06	1.87879e+06	1.82246e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LVLPSLQLPVFHIPR	LVLPSLQLPVFHIPR	4	LVLPSLQLPVFHIPR4	20954.8	48392.2	29052
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	LVLPTEESTSK	LVLPTEESTSK	2	LVLPTEESTSK2	9836.37	6995.25	10207.7
D3ZTC4	D3ZTC4	D3ZTC4_RAT	Ccdc88b	Coiled-coil domain containing 88B	1	LVLQKPQQTSEGPPDAWSR	LVLQKPQQTSEGPPDAWSR	3	LVLQKPQQTSEGPPDAWSR3	4054.4	4058.39	1269
O54923	O54923	EXOC6_RAT	Exoc6	Exocyst complex component 6	1	LVLQPQSSVHETVDGYR	LVLQPQSSVHETVDGYR	3	LVLQPQSSVHETVDGYR3	7531.4		13383.8
O54923	O54923	EXOC6_RAT	Exoc6	Exocyst complex component 6	1	LVLQPQSSVHETVDGYRR	LVLQPQSSVHETVDGYRR	3	LVLQPQSSVHETVDGYRR3		11147.2	
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	LVLTEGER	LVLTEGER	2	LVLTEGER2	8890.88	14340.1	13539
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	LVLTLVLGALESPNPLLR	LVLTLVLGALESPNPLLR	3	LVLTLVLGALESPNPLLR3		4060.07	
Q6AYI5	Q6AYI5	SHOC2_RAT	Shoc2	Leucine-rich repeat protein SHOC-2	1	LVLTNNQLTTLPR	LVLTNNQLTTLPR	2	LVLTNNQLTTLPR2	6880.44	4545.17	5966.28
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	LVLTQEQLHQLHGR	LVLTQEQLHQLHGR	3	LVLTQEQLHQLHGR3	101131	98753.3	92737
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	LVLTQEQLHQLHGR	LVLTQEQLHQLHGR	4	LVLTQEQLHQLHGR4	166381	167700	136230
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	LVLTYVK	LVLTYVK	2	LVLTYVK2	60861.2	59096.2	35180.4
P62828	Q8K586;P62828;Q66H11	RAN_RAT	Ran	GTP-binding nuclear protein Ran	0	LVLVGDGGTGK	LVLVGDGGTGK	2	LVLVGDGGTGK2	175564	163415	143233
B2RZ78	B2RZ78	VPS29_RAT	Vps29	Vacuolar protein sorting-associated protein 29	1	LVLVLGDLHIPHR	LVLVLGDLHIPHR	3	LVLVLGDLHIPHR3	2909.75	3099.59	1490.44
Q6AYF8	Q6AYF8	Q6AYF8_RAT	Serpinb9	Serpin family B member 9	1	LVLVNALYFK	LVLVNALYFK	2	LVLVNALYFK2	28054.7	32493.6	26304
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	LVLVNAVYFK	LVLVNAVYFK	2	LVLVNAVYFK2	281805	211417	194127
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	LVLVSPTSEQYDSLLR	LVLVSPTSEQYDSLLR	2	LVLVSPTSEQYDSLLR2	60301	75841.6	66649
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	LVLVSPTSEQYDSLLR	LVLVSPTSEQYDSLLR	3	LVLVSPTSEQYDSLLR3	28343.2	24667.5	26619.7
A8WCF8	A8WCF8	TPRGL_RAT	Tprg1l	Tumor protein p63-regulated gene 1-like protein	1	LVLVTDQSLLICK	LVLVTDQSLLIC(UniMod:4)K	2	LVLVTDQSLLIC(UniMod:4)K2	49337.1	40163.1	49048.8
Q6IRK9	Q6IRK9	CBPQ_RAT	Cpq	Carboxypeptidase Q	1	LVLWTAEEQGGVGASQYYELHK	LVLWTAEEQGGVGASQYYELHK	3	LVLWTAEEQGGVGASQYYELHK3	36368.6	22646.3	27611
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	LVLYAILPNGEVVGDTAK	LVLYAILPNGEVVGDTAK	2	LVLYAILPNGEVVGDTAK2		8486.99	6790.5
Q0Z843	Q0Z843	Q0Z843_RAT	Fig4	FIG4 phosphoinositide 5-phosphatase	1	LVLYETR	LVLYETR	2	LVLYETR2	22182	24354.4	26927.2
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	LVMAQHMIR	LVMAQHMIR	2	LVMAQHMIR2	18351.2	12804	9892.54
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	LVMEAQPEWLR	LVMEAQPEWLR	2	LVMEAQPEWLR2	23891.6	22330	15698.1
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	LVMEDGK	LVMEDGK	2	LVMEDGK2	56285.5	63074.4	68274.2
Q6AYT3	Q6AYT3;A0A8I5YBA4	RTCB_RAT	Rtcb	RNA-splicing ligase RtcB homolog	0	LVMEEAPESYK	LVMEEAPESYK	2	LVMEEAPESYK2	23599.7	15403.1	28325.3
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	LVMEELLPTLQTDLLPK	LVMEELLPTLQTDLLPK	2	LVMEELLPTLQTDLLPK2	32242.4	14973.3	26924.8
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	LVMEELLPTLQTDLLPK	LVMEELLPTLQTDLLPK	3	LVMEELLPTLQTDLLPK3	2913.63	4356.17	3505.44
A0A8I6ABM0	A0A8I6ABM0	A0A8I6ABM0_RAT	Rit1	Ras-like without CAAX 1	1	LVMLGAGGVGK	LVMLGAGGVGK	2	LVMLGAGGVGK2	24294.5	15739.8	21924.9
Q498T9	Q498T9	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	1	LVMLNNLK	LVMLNNLK	2	LVMLNNLK2	43940.1	38531.1	43172.3
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	LVMLYALHYER	LVMLYALHYER	3	LVMLYALHYER3	19073.4	14896.9	17402.5
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	LVMMEQIAQSLK	LVMMEQIAQSLK	2	LVMMEQIAQSLK2	5580.96	4483.02	4009.75
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	LVMMEQIAQSLKDEQK	LVMMEQIAQSLKDEQK	3	LVMMEQIAQSLKDEQK3	37852.8	36986.6	28617.3
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	LVMQVSATDADIR	LVMQVSATDADIR	2	LVMQVSATDADIR2	51442	44803.7	43708.5
A1A5P5	A1A5P5	ARMC9_RAT	Armc9	LisH domain-containing protein ARMC9	1	LVNALASLAEGR	LVNALASLAEGR	2	LVNALASLAEGR2	3467.51	1985.32	1102.63
P04762	P04762	CATA_RAT	Cat	Catalase	1	LVNANGEAVYCK	LVNANGEAVYC(UniMod:4)K	2	LVNANGEAVYC(UniMod:4)K2	9660.85	13627.7	8240.69
Q9R010	Q9R010	CIB1_RAT	Cib1	Calcium and integrin-binding protein 1	1	LVNCLTGEGEDTR	LVNC(UniMod:4)LTGEGEDTR	2	LVNC(UniMod:4)LTGEGEDTR2	52152.8	53416.5	41774.5
A0A8I5ZQQ3	A0A8I5ZQQ3	A0A8I5ZQQ3_RAT	Pdpr	Pyruvate dehydrogenase phosphatase regulatory subunit	1	LVNCPETFTADMK	LVNC(UniMod:4)PETFTADMK	2	LVNC(UniMod:4)PETFTADMK2	3996.35	8276.97	6501.22
P0C1S9	P0C1S9	DGLB_RAT	Daglb	Diacylglycerol lipase-beta	1	LVNDGILSQAFSVAPEYR	LVNDGILSQAFSVAPEYR	3	LVNDGILSQAFSVAPEYR3	10935.1	3955.86	8810.69
Q7TSU1	D4A631;Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	0	LVNDLSK	LVNDLSK	2	LVNDLSK2	190561	224166	196951
Q5XHY7	Q5XHY7	STAM2_RAT	Stam2	Signal transducing adapter molecule 2	1	LVNEAPMYSVYSK	LVNEAPMYSVYSK	2	LVNEAPMYSVYSK2	28919.6	17600.6	21674.6
A0A8I6ACX1	A0A8I6ACX1	A0A8I6ACX1_RAT	LOC690000	Similar to CG3740-PA	1	LVNEATAIIR	LVNEATAIIR	2	LVNEATAIIR2	4766.39	3207.15	
A0A8I6AEV8;D4A9P7	A0A8I6AEV8;A0A8I6ASA1;D4A9P7	A0A8I6AEV8_RAT;D4A9P7_RAT	Bola2;Bola2-ps1	BolA family member 2, pseudogene 1	0	LVNECLAEELPHIHAFEQK	LVNEC(UniMod:4)LAEELPHIHAFEQK	3	LVNEC(UniMod:4)LAEELPHIHAFEQK3	10240.8	15261.2	11870.6
A0A8I6AEV8;D4A9P7	A0A8I6AEV8;A0A8I6ASA1;D4A9P7	A0A8I6AEV8_RAT;D4A9P7_RAT	Bola2;Bola2-ps1	BolA family member 2, pseudogene 1	0	LVNECLAEELPHIHAFEQK	LVNEC(UniMod:4)LAEELPHIHAFEQK	4	LVNEC(UniMod:4)LAEELPHIHAFEQK4	52380.7	55962.9	40324.8
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	LVNFGYDYR	LVNFGYDYR	2	LVNFGYDYR2	45390.5	60991.6	49508.9
F1LXR9	F1LXR9	F1LXR9_RAT	Irag2	Inositol 1,4,5-triphosphate receptor associated 2	1	LVNFQQSEPTSANEK	LVNFQQSEPTSANEK	2	LVNFQQSEPTSANEK2	3104.78	2231.82	
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	LVNGASASEGR	LVNGASASEGR	2	LVNGASASEGR2	184187	373304	173472
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	LVNGASASEGRVEIFYR	LVNGASASEGRVEIFYR	3	LVNGASASEGRVEIFYR3	16391.3		18450.7
A0A0G2JVL6	A0A0G2JVL6	A0A0G2JVL6_RAT	Ndufa8	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8	1	LVNGCALNFFR	LVNGC(UniMod:4)ALNFFR	2	LVNGC(UniMod:4)ALNFFR2	18970.7	18051.2	30367.1
Q8CIZ5	F1LVL9;Q8CIZ5	DMBT1_RAT	Dmbt1	Deleted in malignant brain tumors 1 protein	0	LVNGGDR	LVNGGDR	1	LVNGGDR1			6523.74
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	LVNGGDTCR	LVNGGDTC(UniMod:4)R	2	LVNGGDTC(UniMod:4)R2	7.09962e+06		6.9395e+06
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	LVNGGNSCR	LVNGGNSC(UniMod:4)R	2	LVNGGNSC(UniMod:4)R2			156321
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	LVNHSPLPQNVVFDVQIPK	LVNHSPLPQNVVFDVQIPK	3	LVNHSPLPQNVVFDVQIPK3	94753.8	101258	64830.4
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	LVNHSPLPQNVVFDVQIPK	LVNHSPLPQNVVFDVQIPK	4	LVNHSPLPQNVVFDVQIPK4	1.25252e+06	1.37532e+06	1.22296e+06
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	LVNIKGDPIPNQQVFIK	LVNIKGDPIPNQQVFIK	3	LVNIKGDPIPNQQVFIK3	6834.52	8390.24	7249.38
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	LVNILVQLPLSSNR	LVNILVQLPLSSNR	2	LVNILVQLPLSSNR2	21417	19766.3	13692.3
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	LVNILVQLPLSSNR	LVNILVQLPLSSNR	3	LVNILVQLPLSSNR3	5989.65	7535.56	
Q5RJR8	Q5RJR8	LRC59_RAT	Lrrc59	Leucine-rich repeat-containing protein 59	1	LVNLQHLDLLNNR	LVNLQHLDLLNNR	2	LVNLQHLDLLNNR2	10847.3	9444.29	10234.2
Q5RJR8	Q5RJR8	LRC59_RAT	Lrrc59	Leucine-rich repeat-containing protein 59	1	LVNLQHLDLLNNR	LVNLQHLDLLNNR	3	LVNLQHLDLLNNR3	244987	235412	255482
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	LVNMFDK	LVNMFDK	2	LVNMFDK2	70803.6	64586.8	58113.6
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	LVNMLDAVR	LVNMLDAVR	2	LVNMLDAVR2	5.19425e+06	5.48094e+06	5.7354e+06
Q498U1	Q498U1;A0A8I5ZW97	Q498U1_RAT	Abcg3l4	ATP-binding cassette, subfamily G (WHITE), member 3-like 4	0	LVNMYAQSR	LVNMYAQSR	2	LVNMYAQSR2	6410.61	3483.17	9902.87
Q8VHK0	Q8VHK0	ACOT8_RAT	Acot8	Acyl-coenzyme A thioesterase 8	1	LVNPPALNQLQTLEPK	LVNPPALNQLQTLEPK	2	LVNPPALNQLQTLEPK2	47162.8	53004.9	46088.5
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	LVNPSQYR	LVNPSQYR	2	LVNPSQYR2	102343	94590.4	110231
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	LVNRIESWLETHVVLER	LVNRIESWLETHVVLER	4	LVNRIESWLETHVVLER4	2003.76	4780.72	2655.89
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	LVNTGLLTLR	LVNTGLLTLR	2	LVNTGLLTLR2	29205.9	19660.4	21183.2
P58200	P58200	VTI1B_RAT	Vti1b	Vesicle transport through interaction with t-SNAREs homolog 1B	1	LVNTNENLSK	LVNTNENLSK	2	LVNTNENLSK2	40859.2	46982.7	36912.6
D3ZFJ6	D3ZFJ6	D3ZFJ6_RAT	Lactb	Lactamase, beta	1	LVNTPYVDNSYK	LVNTPYVDNSYK	2	LVNTPYVDNSYK2	26499.5	26804.4	18768.7
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	LVNTVNPGAR	LVNTVNPGAR	2	LVNTVNPGAR2	35758.6	22317.1	27291.1
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	LVNWSCTLNSAISDIEVDK	LVNWSC(UniMod:4)TLNSAISDIEVDK	3	LVNWSC(UniMod:4)TLNSAISDIEVDK3	6088.49		
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	LVNWSCTLNSAISDIEVDKK	LVNWSC(UniMod:4)TLNSAISDIEVDKK	3	LVNWSC(UniMod:4)TLNSAISDIEVDKK3	13871.1	20228.2	28688.9
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	LVNYYSCSFWK	LVNYYSC(UniMod:4)SFWK	2	LVNYYSC(UniMod:4)SFWK2	30624.6	34943.9	24385.4
P20786	P20786	PGFRA_RAT	Pdgfra	Platelet-derived growth factor receptor alpha	1	LVPASYDSR	LVPASYDSR	2	LVPASYDSR2	137696	138903	105142
F1LQ27	F1LQ27	F1LQ27_RAT	Fam98c	Family with sequence similarity 98, member C	1	LVPATSVAAR	LVPATSVAAR	2	LVPATSVAAR2	18069	13078	14056.8
F1M784	F1M784	F1M784_RAT	Pik3ap1	Phosphoinositide-3-kinase adaptor protein 1	1	LVPDACFSSQDLSVFR	LVPDAC(UniMod:4)FSSQDLSVFR	2	LVPDAC(UniMod:4)FSSQDLSVFR2	29044.8	24205.3	27153.8
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	LVPDDDYWGK	LVPDDDYWGK	2	LVPDDDYWGK2	54385	53301.1	57907
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	LVPDSDVR	LVPDSDVR	2	LVPDSDVR2	534880	518542	502764
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	LVPEIYFAEMDPDLEK	LVPEIYFAEMDPDLEK	2	LVPEIYFAEMDPDLEK2	29222.5	31711.7	17351.8
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	LVPEIYFAEMDPDLEK	LVPEIYFAEMDPDLEK	3	LVPEIYFAEMDPDLEK3	10186	9249.63	7480.36
P07633	P07633	PCCB_RAT	Pccb	Propionyl-CoA carboxylase beta chain, mitochondrial	1	LVPELDTVVPLESSK	LVPELDTVVPLESSK	2	LVPELDTVVPLESSK2	18609.7	16815.7	18903.1
P07633	P07633	PCCB_RAT	Pccb	Propionyl-CoA carboxylase beta chain, mitochondrial	1	LVPELDTVVPLESSK	LVPELDTVVPLESSK	3	LVPELDTVVPLESSK3	3691.37	4028.14	5974.84
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	LVPFAVQLSGHLTK	LVPFAVQLSGHLTK	2	LVPFAVQLSGHLTK2	4.42529e+06	3.53958e+06	4.13188e+06
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	LVPFAVQLSGHLTK	LVPFAVQLSGHLTK	3	LVPFAVQLSGHLTK3	450751	434282	392206
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	LVPFAVQLSGHLTKETER	LVPFAVQLSGHLTKETER	3	LVPFAVQLSGHLTKETER3		11955.8	11369.6
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	LVPFAVQLSGHLTKETER	LVPFAVQLSGHLTKETER	4	LVPFAVQLSGHLTKETER4	21500.7	9012.67	10439.2
P85971	P85971	6PGL_RAT	Pgls	6-phosphogluconolactonase	1	LVPFDHAESTYGLYR	LVPFDHAESTYGLYR	3	LVPFDHAESTYGLYR3	26608.8	29405.8	38946.2
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	LVPGDLEPVHKPDPAEVPK	LVPGDLEPVHKPDPAEVPK	4	LVPGDLEPVHKPDPAEVPK4	4066.63	1983.41	
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	LVPGGGATEIELAK	LVPGGGATEIELAK	2	LVPGGGATEIELAK2	1.05581e+06	1.02821e+06	1.15852e+06
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	LVPGGGATEIELAK	LVPGGGATEIELAK	3	LVPGGGATEIELAK3	9167.12	4859.08	6329
A0A1W2Q5Z7	A0A1W2Q5Z7	A0A1W2Q5Z7_RAT	St3gal1	ST3 beta-galactoside alpha-2,3-sialyltransferase 1	1	LVPGNVDPMLNK	LVPGNVDPMLNK	2	LVPGNVDPMLNK2	66509.5	48234.5	55830.1
A0A1W2Q5Z7	A0A1W2Q5Z7	A0A1W2Q5Z7_RAT	St3gal1	ST3 beta-galactoside alpha-2,3-sialyltransferase 1	1	LVPGNVDPMLNKR	LVPGNVDPMLNKR	3	LVPGNVDPMLNKR3	27467	29870	31716.4
F7FPK8	F7FPK8	F7FPK8_RAT	Lman2	Lectin, mannose-binding 2	1	LVPGPVFGSK	LVPGPVFGSK	2	LVPGPVFGSK2	713759	622937	636298
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	LVPGWTK	LVPGWTK	2	LVPGWTK2	21004.3	6662.67	34102.2
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	LVPGWTKPITIGR	LVPGWTKPITIGR	2	LVPGWTKPITIGR2	87083.1	50954.5	79582.3
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	LVPGWTKPITIGR	LVPGWTKPITIGR	3	LVPGWTKPITIGR3	343616	353872	345370
Q11205	Q11205	SIA4B_RAT	St3gal2	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2	1	LVPGYTGQQR	LVPGYTGQQR	2	LVPGYTGQQR2	38578.1	26840	33203.7
Q04631	Q04631	FNTA_RAT	Fnta	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha	1	LVPHNESAWNYLK	LVPHNESAWNYLK	3	LVPHNESAWNYLK3	24276.6	26804	19643.3
O89035	O89035	DIC_RAT	Slc25a10	Mitochondrial dicarboxylate carrier	1	LVPHTVLTFMFLEQLR	LVPHTVLTFMFLEQLR	3	LVPHTVLTFMFLEQLR3	4093.06	2092.55	7230.22
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	LVPIDTPDHLQR	LVPIDTPDHLQR	3	LVPIDTPDHLQR3	64992.5	59987.9	49180.1
Q6P777	Q6P777	MB12A_RAT	Mvb12a	Multivesicular body subunit 12A	1	LVPKPGTLSQDMR	LVPKPGTLSQDMR	3	LVPKPGTLSQDMR3	33613.3	19101.4	27241.8
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	LVPLKETIK	LVPLKETIK	2	LVPLKETIK2	169526	173440	209358
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	LVPLLDTGDIIIDGGNSEYR	LVPLLDTGDIIIDGGNSEYR	3	LVPLLDTGDIIIDGGNSEYR3	44264.2	28144.8	28997.1
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LVPLLLEDGGDAPAALEAALEEK	LVPLLLEDGGDAPAALEAALEEK	3	LVPLLLEDGGDAPAALEAALEEK3	17850.6	18031.8	21913.6
Q66HC5	Q66HC5	NUP93_RAT	Nup93	Nuclear pore complex protein Nup93	1	LVPLNQESMEER	LVPLNQESMEER	2	LVPLNQESMEER2	31219.9	23952.2	
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	LVPLNTQSQQLIHSK	LVPLNTQSQQLIHSK	3	LVPLNTQSQQLIHSK3	15423.1	12788.5	
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	LVPLVNGVR	LVPLVNGVR	2	LVPLVNGVR2	22781.7	24214.8	21295.9
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	LVPLVQATFPENAVTK	LVPLVQATFPENAVTK	2	LVPLVQATFPENAVTK2	13857	18846.9	10099.3
O88902	O88902	PTN23_RAT	Ptpn23	Tyrosine-protein phosphatase non-receptor type 23 (Fragment)	1	LVPMAAHEASSLYSEEK	LVPMAAHEASSLYSEEK	3	LVPMAAHEASSLYSEEK3	13904	13982.1	7500.33
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LVPNHHFDPHLEASALR	LVPNHHFDPHLEASALR	3	LVPNHHFDPHLEASALR3	40426.3	29298.4	34732.3
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LVPNHHFDPHLEASALR	LVPNHHFDPHLEASALR	4	LVPNHHFDPHLEASALR4	389102	418366	318114
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	LVPNPAQEDSNNDGVGDICEADFDQDK	LVPNPAQEDSNNDGVGDIC(UniMod:4)EADFDQDK	4	LVPNPAQEDSNNDGVGDIC(UniMod:4)EADFDQDK4	15320.3	14569	24134.7
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	LVPNPDQK	LVPNPDQK	1	LVPNPDQK1	584748	476330	443993
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	LVPNPDQK	LVPNPDQK	2	LVPNPDQK2	154005	163658	137111
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	LVPNPDQKDSDGDGR	LVPNPDQKDSDGDGR	3	LVPNPDQKDSDGDGR3	25472.7	29032.2	40318.1
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	LVPNPDQKDSDGDGRGDACK	LVPNPDQKDSDGDGRGDAC(UniMod:4)K	3	LVPNPDQKDSDGDGRGDAC(UniMod:4)K3	69546.1	93905.1	95374.2
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	LVPNPDQKDSDGDGRGDACK	LVPNPDQKDSDGDGRGDAC(UniMod:4)K	4	LVPNPDQKDSDGDGRGDAC(UniMod:4)K4	101138	172913	229488
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	LVPNPGQEDNDR	LVPNPGQEDNDR	2	LVPNPGQEDNDR2	69052.6	45117.5	48978.1
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	LVPNPGQEDNDRDGVGDACQGDFDADK	LVPNPGQEDNDRDGVGDAC(UniMod:4)QGDFDADK	3	LVPNPGQEDNDRDGVGDAC(UniMod:4)QGDFDADK3	827307	819156	840803
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	LVPNPGQEDNDRDGVGDACQGDFDADK	LVPNPGQEDNDRDGVGDAC(UniMod:4)QGDFDADK	4	LVPNPGQEDNDRDGVGDAC(UniMod:4)QGDFDADK4	35983.2	46779.3	51848.9
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	LVPNPNQK	LVPNPNQK	2	LVPNPNQK2	393821	401391	362506
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	LVPPECHCVR	LVPPEC(UniMod:4)HC(UniMod:4)VR	3	LVPPEC(UniMod:4)HC(UniMod:4)VR3	314637	325831	298289
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	LVPQLVR	LVPQLVR	2	LVPQLVR2	131476	108805	120492
B2GV54	B2GV54	NCEH1_RAT	Nceh1	Neutral cholesterol ester hydrolase 1	1	LVPQVYFPEQIHDVIR	LVPQVYFPEQIHDVIR	2	LVPQVYFPEQIHDVIR2	5934.59	5470.31	6122.34
B2GV54	B2GV54	NCEH1_RAT	Nceh1	Neutral cholesterol ester hydrolase 1	1	LVPQVYFPEQIHDVIR	LVPQVYFPEQIHDVIR	3	LVPQVYFPEQIHDVIR3	28900.1	26777.5	27262
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	LVPTLDLDK	LVPTLDLDK	2	LVPTLDLDK2	90526.2	107907	84041.9
D4AB06	D4AB06	D4AB06_RAT	Haus5	HAUS augmin-like complex, subunit 5	1	LVPTSEAVAPQSQELLR	LVPTSEAVAPQSQELLR	3	LVPTSEAVAPQSQELLR3	2961.41		5689.25
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	LVPVDETDR	LVPVDETDR	2	LVPVDETDR2	53665.4	55154.5	45992.8
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	LVPVDETDRLQPLDR	LVPVDETDRLQPLDR	3	LVPVDETDRLQPLDR3	51244.7	32653.4	28960.5
B5DEN5	B5DEN5	B5DEN5_RAT	Eef1b2	Elongation factor 1-beta	1	LVPVGYGIK	LVPVGYGIK	1	LVPVGYGIK1	10922.1	4520.78	7059.15
B5DEN5	B5DEN5	B5DEN5_RAT	Eef1b2	Elongation factor 1-beta	1	LVPVGYGIK	LVPVGYGIK	2	LVPVGYGIK2	3.38712e+06	3.49695e+06	3.3039e+06
B5DEN5	B5DEN5	B5DEN5_RAT	Eef1b2	Elongation factor 1-beta	1	LVPVGYGIKK	LVPVGYGIKK	2	LVPVGYGIKK2			2339.51
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	LVPVGYGIR	LVPVGYGIR	2	LVPVGYGIR2	2.95942e+06	2.74184e+06	3.09922e+06
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	LVPVSGAR	LVPVSGAR	2	LVPVSGAR2	82010.6	89207.4	62830.5
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	LVPVVNNR	LVPVVNNR	2	LVPVVNNR2	42942.2	48508.6	75294.2
Q91XJ1	Q91XJ1	BECN1_RAT	Becn1	Beclin-1	1	LVPYGNHSYLESLTDK	LVPYGNHSYLESLTDK	3	LVPYGNHSYLESLTDK3	10908.7	20167.1	
P12075	P12075	COX5B_RAT	Cox5b	Cytochrome c oxidase subunit 5B, mitochondrial	1	LVPYQMVH	LVPYQMVH	2	LVPYQMVH2	1.34792e+06	1.33761e+06	1.53223e+06
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	LVQAAQMLQSDPYSVPAR	LVQAAQMLQSDPYSVPAR	3	LVQAAQMLQSDPYSVPAR3	840280	790987	865294
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	LVQAAQMLQSDPYSVPARDYLIDGSR	LVQAAQMLQSDPYSVPARDYLIDGSR	3	LVQAAQMLQSDPYSVPARDYLIDGSR3	6945.16	7215.66	5023.11
A0A8I5Y2B8	A0A8I6AAF3;A0A8I5Y2B8;Q63716;A0A0G2K3Z9	A0A8I5Y2B8_RAT	ENSRNOG00000062500	Peroxiredoxin C-terminal domain-containing protein	0	LVQAFQFTDK	LVQAFQFTDK	2	LVQAFQFTDK2	177335	192679	175112
P35704	P35704	PRDX2_RAT	Prdx2	Peroxiredoxin-2	1	LVQAFQYTDEHGEVCPAGWK	LVQAFQYTDEHGEVC(UniMod:4)PAGWK	3	LVQAFQYTDEHGEVC(UniMod:4)PAGWK3	15655.3	16616.7	10933.1
Q9Z0V5	Q9Z0V5	PRDX4_RAT	Prdx4	Peroxiredoxin-4	1	LVQAFQYTDK	LVQAFQYTDK	2	LVQAFQYTDK2	186296	181679	199909
G3V816	G3V816	G3V816_RAT	Nme3	Nucleoside diphosphate kinase	1	LVQASEELLR	LVQASEELLR	2	LVQASEELLR2	5882.3	12075.4	13141.4
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	LVQCVDAFEEK	LVQC(UniMod:4)VDAFEEK	2	LVQC(UniMod:4)VDAFEEK2	228946	214987	207598
A0A8I6AAF1	A0A8I6AAF1	A0A8I6AAF1_RAT	Card19	Caspase recruitment domain family, member 19	1	LVQDTPFLTGQGR	LVQDTPFLTGQGR	2	LVQDTPFLTGQGR2	33317.8	33231.1	48060.2
P63039	A0A8I5ZVK6;A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	LVQDVANNTNEEAGDGTTTATVLAR	LVQDVANNTNEEAGDGTTTATVLAR	3	LVQDVANNTNEEAGDGTTTATVLAR3	159200	153600	218021
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	LVQDYGLESEVAQHLAK	LVQDYGLESEVAQHLAK	2	LVQDYGLESEVAQHLAK2	3735.54	6500.47	7788.47
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	LVQDYGLESEVAQHLAK	LVQDYGLESEVAQHLAK	3	LVQDYGLESEVAQHLAK3	150140	132287	163853
P02770	P02770	ALBU_RAT	Alb	Albumin	1	LVQEVTDFAK	LVQEVTDFAK	2	LVQEVTDFAK2	3.94253e+07	4.25404e+07	3.87354e+07
O88994	O88994	MARC2_RAT	Mtarc2	Mitochondrial amidoxime reducing component 2	1	LVQFDTK	LVQFDTK	2	LVQFDTK2	63674	59713.7	70127.8
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	LVQFEQEIER	LVQFEQEIER	2	LVQFEQEIER2	99498.9	106960	110392
P58751	P58751	RELN_RAT	Reln	Reelin	1	LVQFYIQIGSK	LVQFYIQIGSK	2	LVQFYIQIGSK2	3164.18		3239.99
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	LVQGANQGLSHAAK	LVQGANQGLSHAAK	2	LVQGANQGLSHAAK2	9011.36	10694.2	6573.73
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	LVQGANQGLSHAAK	LVQGANQGLSHAAK	3	LVQGANQGLSHAAK3	46363	33502.7	31463.1
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	LVQGVIFSCGGK	LVQGVIFSC(UniMod:4)GGK	2	LVQGVIFSC(UniMod:4)GGK2	58259.4	59346.3	45405.1
Q9R0Z7	Q9R0Z7	AAGAB_RAT	Aagab	Alpha- and gamma-adaptin-binding protein p34	1	LVQHILGTEDAVVEATSSDAVR	LVQHILGTEDAVVEATSSDAVR	3	LVQHILGTEDAVVEATSSDAVR3	8098.1	7242.9	10813
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	LVQHTYSCLFGTFLCNNAK	LVQHTYSC(UniMod:4)LFGTFLC(UniMod:4)NNAK	3	LVQHTYSC(UniMod:4)LFGTFLC(UniMod:4)NNAK3			6870.25
Q80T18	Q80T18	GMFG_RAT	Gmfg	Glia maturation factor gamma	1	LVQIAELTK	LVQIAELTK	2	LVQIAELTK2	102673	93144.3	73851.2
P17220	P17220	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	1	LVQIEYALAAVAGGAPSVGIK	LVQIEYALAAVAGGAPSVGIK	3	LVQIEYALAAVAGGAPSVGIK3	94008.8	118252	88940.9
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	LVQLDSAISMELWQEAFK	LVQLDSAISMELWQEAFK	3	LVQLDSAISMELWQEAFK3	7058.68		9020.93
A0A096MKE0	A0A096MKE0	A0A096MKE0_RAT	Asph	Aspartate-beta-hydroxylase	1	LVQLFPSDTTLK	LVQLFPSDTTLK	2	LVQLFPSDTTLK2	59718.7	47184.6	54474
Q68FT1	Q68FT1	COQ9_RAT	Coq9	Ubiquinone biosynthesis protein COQ9, mitochondrial	1	LVQLGQAEK	LVQLGQAEK	2	LVQLGQAEK2	29959.8	18882.7	19345.9
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	LVQLILHEYK	LVQLILHEYK	2	LVQLILHEYK2	12726.5	12135.1	11493.5
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	LVQLILHEYK	LVQLILHEYK	3	LVQLILHEYK3	19758.6	26162.3	18073.9
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	LVQLLVK	LVQLLVK	2	LVQLLVK2	83226.7	60700.4	55618.5
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	LVQLQCLAHGTPPLTYQWSR	LVQLQC(UniMod:4)LAHGTPPLTYQWSR	3	LVQLQC(UniMod:4)LAHGTPPLTYQWSR3	17118.7	28031.8	20533.9
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	LVQLYGVCTK	LVQLYGVC(UniMod:4)TK	2	LVQLYGVC(UniMod:4)TK2	111397	112118	107813
Q6AYF8	Q6AYF8	Q6AYF8_RAT	Serpinb9	Serpin family B member 9	1	LVQMMCCEDTYNLAHVK	LVQMMC(UniMod:4)C(UniMod:4)EDTYNLAHVK	3	LVQMMC(UniMod:4)C(UniMod:4)EDTYNLAHVK3	36031.1	43973.4	
P18292	P18292	THRB_RAT	F2	Prothrombin	1	LVQNFCR	LVQNFC(UniMod:4)R	1	LVQNFC(UniMod:4)R1	52507	35534.6	42433.3
P18292	P18292	THRB_RAT	F2	Prothrombin	1	LVQNFCR	LVQNFC(UniMod:4)R	2	LVQNFC(UniMod:4)R2	661564	687819	705701
A0A8I5ZUE7	A0A8I5ZUE7	A0A8I5ZUE7_RAT	Zc3h7b	Zinc finger CCCH-type containing 7B	1	LVQNLFAEGNDLFR	LVQNLFAEGNDLFR	2	LVQNLFAEGNDLFR2	7462.46	3263.89	3396.68
P32362	P32362	DCUP_RAT	Urod	Uroporphyrinogen decarboxylase (Fragment)	1	LVQQMLNDFGPQR	LVQQMLNDFGPQR	2	LVQQMLNDFGPQR2	1736.33	3573.58	7378.82
A0A8I6GKB1	A0A8I6GKB1	A0A8I6GKB1_RAT	Mocs1	Molybdenum cofactor synthesis 1	1	LVQQNQLK	LVQQNQLK	2	LVQQNQLK2	7890.18	10036.2	9592.6
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	LVQQTILCYQNPVTGLLSASHDQK	LVQQTILC(UniMod:4)YQNPVTGLLSASHDQK	3	LVQQTILC(UniMod:4)YQNPVTGLLSASHDQK3	12049	6430.19	6349.04
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	LVQSFAVVLFECHQMDDFGPAK	LVQSFAVVLFEC(UniMod:4)HQMDDFGPAK	3	LVQSFAVVLFEC(UniMod:4)HQMDDFGPAK3	8164.73	7700.63	
P06760	P06760	BGLR_RAT	Gusb	Beta-glucuronidase	1	LVQSGPLTTFR	LVQSGPLTTFR	2	LVQSGPLTTFR2	13513.7	8879.91	10409.2
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	LVQSNLMR	LVQSNLMR	2	LVQSNLMR2	56742.2	52850.5	56169.3
Q71TY3	M0RA26;P24051;Q71TY3	RS27_RAT	Rps27	Small ribosomal subunit protein eS27	0	LVQSPNSYFMDVK	LVQSPNSYFMDVK	2	LVQSPNSYFMDVK2	13126.7	19782.8	16544.9
Q63228	Q63228	GMFB_RAT	Gmfb	Glia maturation factor beta	1	LVQTAELTK	LVQTAELTK	2	LVQTAELTK2	63181.1	53635.1	57822.2
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LVQTPLTDR	LVQTPLTDR	2	LVQTPLTDR2	336049	406145	331063
D3ZE72	D3ZE72	D3ZE72_RAT	Metap1	Methionine aminopeptidase	1	LVQTTYECLMQAVDAVKPGVR	LVQTTYEC(UniMod:4)LMQAVDAVKPGVR	3	LVQTTYEC(UniMod:4)LMQAVDAVKPGVR3	6276.6	5330.96	
A0A0G2KA54	P08932;A0A0G2KA54	A0A0G2KA54_RAT	Kng1	Kininogen 1	0	LVQVQETK	LVQVQETK	2	LVQVQETK2	356027	273943	278001
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	LVQWGPGLVALQEAEIPEHFGAVR	LVQWGPGLVALQEAEIPEHFGAVR	3	LVQWGPGLVALQEAEIPEHFGAVR3	17397.6	23746.2	29098.4
A0A8I5ZT87	A0A8I5ZT87	A0A8I5ZT87_RAT	Mycbp	Myc binding protein	1	LVQYEPPQEEK	LVQYEPPQEEK	2	LVQYEPPQEEK2	50985.8	66492	65631.8
P26342	P26342	TGBR3_RAT	Tgfbr3	Transforming growth factor beta receptor type 3	1	LVRDDIPSTQENLMK	LVRDDIPSTQENLMK	3	LVRDDIPSTQENLMK3	7517.63	7668.82	8509.52
Q06647	Q06647	ATPO_RAT	Atp5po	ATP synthase subunit O, mitochondrial	1	LVRPPVQVYGIEGR	LVRPPVQVYGIEGR	3	LVRPPVQVYGIEGR3	538260	474684	565025
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	LVSAIQQK	LVSAIQQK	2	LVSAIQQK2	32933.8	31201.5	
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	LVSAVVEYGGK	LVSAVVEYGGK	2	LVSAVVEYGGK2	47449.6	45695	46974.8
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	LVSCVEPVVLR	LVSC(UniMod:4)VEPVVLR	2	LVSC(UniMod:4)VEPVVLR2		4190.76	1932.81
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LVSDANEQYK	LVSDANEQYK	2	LVSDANEQYK2	115163	117535	113847
P29410	A0A8I5ZQQ9;P29410	KAD2_RAT	Ak2	Adenylate kinase 2, mitochondrial	0	LVSDEMVVELIEK	LVSDEMVVELIEK	2	LVSDEMVVELIEK2	132407	120665	134206
P29410	A0A8I5ZQQ9;P29410	KAD2_RAT	Ak2	Adenylate kinase 2, mitochondrial	0	LVSDEMVVELIEK	LVSDEMVVELIEK	3	LVSDEMVVELIEK3	11268.3	8752.69	8426.7
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LVSDGNINSDR	LVSDGNINSDR	2	LVSDGNINSDR2	922739	937732	915478
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LVSDGNINSDRIQEK	LVSDGNINSDRIQEK	3	LVSDGNINSDRIQEK3	139395	197729	173556
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LVSDINR	LVSDINR	2	LVSDINR2	316975	353499	316107
Q80W57	Q80W57	ABCG2_RAT	Abcg2	Broad substrate specificity ATP-binding cassette transporter ABCG2	1	LVSDLLPMR	LVSDLLPMR	2	LVSDLLPMR2	3765.14		4590.8
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	LVSDSLANIVK	LVSDSLANIVK	2	LVSDSLANIVK2	40178	26681	21339.6
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	LVSDSLANIVKPQK	LVSDSLANIVKPQK	2	LVSDSLANIVKPQK2	102015	101114	94705.2
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	LVSDSLANIVKPQK	LVSDSLANIVKPQK	3	LVSDSLANIVKPQK3	3.91482e+06	4.12425e+06	4.18367e+06
Q562A2	Q562A2	ZFR_RAT	Zfr	Zinc finger RNA-binding protein	1	LVSDSLSEHEK	LVSDSLSEHEK	3	LVSDSLSEHEK3	11679.9	16630.7	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	LVSDTVGQR	LVSDTVGQR	2	LVSDTVGQR2	146355	159865	153109
D3ZFJ3	D3ZFJ3	3BP1_RAT	Sh3bp1	SH3 domain-binding protein 1	1	LVSDWNTLK	LVSDWNTLK	2	LVSDWNTLK2	37927.8	23131.4	30789.1
Q9JHW0	Q9JHW0	PSB7_RAT	Psmb7	Proteasome subunit beta type-7	1	LVSEAIAAGIFNDLGSGSNIDLCVISK	LVSEAIAAGIFNDLGSGSNIDLC(UniMod:4)VISK	3	LVSEAIAAGIFNDLGSGSNIDLC(UniMod:4)VISK3	79414.4	71259.4	76614.9
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	LVSEFPYIEAEVK	LVSEFPYIEAEVK	2	LVSEFPYIEAEVK2	170528	159999	182128
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	LVSEFPYIEAEVK	LVSEFPYIEAEVK	3	LVSEFPYIEAEVK3	23653.5	18342.2	19890.2
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	LVSELNEK	LVSELNEK	2	LVSELNEK2		23969.3	34206
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	LVSETEWNLLQK	LVSETEWNLLQK	2	LVSETEWNLLQK2	16934.1	14169.3	18153.4
Q4FZV0	Q4FZV0	MANBA_RAT	Manba	Beta-mannosidase	1	LVSEYGYQSWPSFSTLQK	LVSEYGYQSWPSFSTLQK	3	LVSEYGYQSWPSFSTLQK3	23720.5	19298.1	16399.7
P12711	P12711	ADHX_RAT	Adh5	Alcohol dehydrogenase class-3	1	LVSEYMSK	LVSEYMSK	2	LVSEYMSK2	33945.3	39018.8	37335.4
P51111	P51111	HD_RAT	Htt	Huntingtin	1	LVSFLEAK	LVSFLEAK	2	LVSFLEAK2	25257.1	22472.8	24198.4
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	LVSGPHGCAGR	LVSGPHGC(UniMod:4)AGR	2	LVSGPHGC(UniMod:4)AGR2	4461.49		6711.16
Q62902	Q62902	LMAN1_RAT	Lman1	Protein ERGIC-53	1	LVSGVQHPGSAGVYETTQHFMDIK	LVSGVQHPGSAGVYETTQHFMDIK	3	LVSGVQHPGSAGVYETTQHFMDIK3	17084.9	7486.24	7703.81
Q62902	Q62902	LMAN1_RAT	Lman1	Protein ERGIC-53	1	LVSGVQHPGSAGVYETTQHFMDIK	LVSGVQHPGSAGVYETTQHFMDIK	4	LVSGVQHPGSAGVYETTQHFMDIK4	51476.5	54749.4	51508.5
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	LVSGYDSYGNICGQR	LVSGYDSYGNIC(UniMod:4)GQR	2	LVSGYDSYGNIC(UniMod:4)GQR2	204952	237901	240022
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	LVSGYDSYGNICGQR	LVSGYDSYGNIC(UniMod:4)GQR	3	LVSGYDSYGNIC(UniMod:4)GQR3	33719	41157.4	49940.1
A0A8I6AHI1	A0A8I6AHI1	A0A8I6AHI1_RAT	Cd40	Tumor necrosis factor receptor superfamily member 5	1	LVSHCTALEK	LVSHC(UniMod:4)TALEK	3	LVSHC(UniMod:4)TALEK3	9460.14	11239.7	8749.37
D3ZHA0	D3ZHA0;A0A0G2JXT8;A0A8I5ZV49	FLNC_RAT	Flnc	Filamin-C	0	LVSIDSK	LVSIDSK	1	LVSIDSK1	48276.6	39309.2	37346.5
D3ZHA0	D3ZHA0;A0A0G2JXT8;A0A8I5ZV49	FLNC_RAT	Flnc	Filamin-C	0	LVSIDSK	LVSIDSK	2	LVSIDSK2	8.41931e+06	8.47056e+06	9.1092e+06
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	LVSIGAEEIVDGNAK	LVSIGAEEIVDGNAK	2	LVSIGAEEIVDGNAK2	190729	181971	199405
Q9Z1P2	A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	LVSIGAEEIVDGNVK	LVSIGAEEIVDGNVK	2	LVSIGAEEIVDGNVK2	536467	151859	69109.3
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	LVSIGYPQELLNFAYDSTFPTR	LVSIGYPQELLNFAYDSTFPTR	3	LVSIGYPQELLNFAYDSTFPTR3	3886.82	1212.42	3685.21
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	LVSIVAEQLEK	LVSIVAEQLEK	2	LVSIVAEQLEK2	26075.5	15027.1	25186.5
G3V7N6	G3V7N6	G3V7N6_RAT	Mboat7	Membrane bound O-acyltransferase domain containing 7-like 1	1	LVSLASEVQDLHLAQR	LVSLASEVQDLHLAQR	3	LVSLASEVQDLHLAQR3	20534	33442.3	25692.7
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	LVSLIGSK	LVSLIGSK	1	LVSLIGSK1	12681.5	9119.3	7887.25
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	LVSLIGSK	LVSLIGSK	2	LVSLIGSK2	7.98339e+06	6.92528e+06	7.93365e+06
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	LVSLPEEIGQLR	LVSLPEEIGQLR	2	LVSLPEEIGQLR2	91288.6	77061.7	80622
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	LVSLYFDTK	LVSLYFDTK	2	LVSLYFDTK2	181411	169990	168792
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	LVSNHSLHETSSVFVDSLTK	LVSNHSLHETSSVFVDSLTK	3	LVSNHSLHETSSVFVDSLTK3	908569	1.01322e+06	812777
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	LVSNHSLHETSSVFVDSLTK	LVSNHSLHETSSVFVDSLTK	4	LVSNHSLHETSSVFVDSLTK4	1.23788e+06	1.07701e+06	1.32074e+06
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	LVSPEQPPK	LVSPEQPPK	2	LVSPEQPPK2	18303.9	15606.1	20022.6
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	LVSPSPTGR	LVSPSPTGR	2	LVSPSPTGR2	215576	213104	209291
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LVSQDNFGFDLPAVEAATK	LVSQDNFGFDLPAVEAATK	3	LVSQDNFGFDLPAVEAATK3	267224	365248	367896
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LVSQDNFGFDLPAVEAATKK	LVSQDNFGFDLPAVEAATKK	3	LVSQDNFGFDLPAVEAATKK3	28303	39502.1	47198.9
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	LVSQEPK	LVSQEPK	2	LVSQEPK2	121171	114698	103774
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	LVSQKPK	LVSQKPK	1	LVSQKPK1			41969.9
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	LVSQNHMCGGSIIGR	LVSQNHMC(UniMod:4)GGSIIGR	2	LVSQNHMC(UniMod:4)GGSIIGR2	9395.4	3989.58	8769.18
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	LVSQNHMCGGSIIGR	LVSQNHMC(UniMod:4)GGSIIGR	3	LVSQNHMC(UniMod:4)GGSIIGR3	411142	418989	389120
Q5BK57	Q5BK57	HAUS8_RAT	Haus8	HAUS augmin-like complex subunit 8	1	LVSQVVELSSQASK	LVSQVVELSSQASK	2	LVSQVVELSSQASK2	26797.8	22391.4	18160.1
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	LVSRPQDALEGVILSPSLEAR	LVSRPQDALEGVILSPSLEAR	3	LVSRPQDALEGVILSPSLEAR3	87251.3	89775.8	97797.4
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	LVSSGIYK	LVSSGIYK	1	LVSSGIYK1	2704.78	2684.29	3075.31
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	LVSSPCCIVTSTYGWTANMER	LVSSPC(UniMod:4)C(UniMod:4)IVTSTYGWTANMER	3	LVSSPC(UniMod:4)C(UniMod:4)IVTSTYGWTANMER3	731832	877315	918071
G3V6D1	G3V6D1	G3V6D1_RAT	Nagpa	N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase	1	LVSSSGGLQNAQFGIR	LVSSSGGLQNAQFGIR	2	LVSSSGGLQNAQFGIR2	1826.05	2428.9	3599.44
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	LVSTLISK	LVSTLISK	2	LVSTLISK2	32367.7	47824.2	67788.8
Q5BK06	Q5BK06	CCDB1_RAT	Ccndbp1	Cyclin-D1-binding protein 1	1	LVSVLIK	LVSVLIK	2	LVSVLIK2	12618.1	15684.2	8032.65
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	LVSVLQNK	LVSVLQNK	2	LVSVLQNK2	34955.8	39147.6	36791.2
Q5FVF9	Q5FVF9	BTD_RAT	Btd	Biotinidase	1	LVSWNPCLEPFR	LVSWNPC(UniMod:4)LEPFR	2	LVSWNPC(UniMod:4)LEPFR2	81961.3	75743.4	44660.2
Q5FVF9	Q5FVF9	BTD_RAT	Btd	Biotinidase	1	LVSWNPCLEPFR	LVSWNPC(UniMod:4)LEPFR	3	LVSWNPC(UniMod:4)LEPFR3	2816.74		
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	LVSWYTLMEGQEPIAR	LVSWYTLMEGQEPIAR	2	LVSWYTLMEGQEPIAR2	43358.6	41570.2	43143.5
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	LVSWYTLMEGQEPIAR	LVSWYTLMEGQEPIAR	3	LVSWYTLMEGQEPIAR3	35953.4	31625.3	34667.5
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	LVSYPYDMAR	LVSYPYDMAR	2	LVSYPYDMAR2	60665.1	61524	80159.6
Q63632	Q63632	S12A4_RAT	Slc12a4	Solute carrier family 12 member 4	1	LVSYTNLTQGAK	LVSYTNLTQGAK	2	LVSYTNLTQGAK2	17004.5	21509.9	
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	LVSYTVR	LVSYTVR	2	LVSYTVR2	146723	161441	144035
G3V7N0	G3V7N0	G3V7N0_RAT	Hs2st1	Heparan sulfate 2-O-sulfotransferase 1	1	LVSYYYFLR	LVSYYYFLR	2	LVSYYYFLR2	13112.5	18870.5	24990.2
Q8VHT6	Q8VHT6	AS3MT_RAT	As3mt	Arsenite methyltransferase	1	LVTANIITVGNK	LVTANIITVGNK	2	LVTANIITVGNK2	20032.5		21428.4
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	LVTDECR	LVTDEC(UniMod:4)R	2	LVTDEC(UniMod:4)R2	201883	183515	165730
D3ZLX3	D3ZLX3	D3ZLX3_RAT	Mob2	MOB kinase activator 2	1	LVTDEDVFPTK	LVTDEDVFPTK	2	LVTDEDVFPTK2	10659.9	12222.7	8702.6
P41498	P41498	PPAC_RAT	Acp1	Low molecular weight phosphotyrosine protein phosphatase	1	LVTDENVSDNWR	LVTDENVSDNWR	2	LVTDENVSDNWR2	10426.2	5930.48	12155.1
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	LVTDIQTAVR	LVTDIQTAVR	2	LVTDIQTAVR2	414746	380143	311984
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	LVTDPDSGLCSHYWGAIIR	LVTDPDSGLC(UniMod:4)SHYWGAIIR	3	LVTDPDSGLC(UniMod:4)SHYWGAIIR3	7679.32	7229.5	
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	LVTDYLDEK	LVTDYLDEK	2	LVTDYLDEK2	44012.7	55427.8	42201.1
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	LVTEELPLPLMK	LVTEELPLPLMK	2	LVTEELPLPLMK2	69054.1	65709.6	78967.4
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	LVTEELPLPLMK	LVTEELPLPLMK	3	LVTEELPLPLMK3	2672.2	1999.48	
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	LVTEMGTYATQSALSSSR	LVTEMGTYATQSALSSSR	2	LVTEMGTYATQSALSSSR2	18400.3	16193.2	15746.9
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	LVTEMGTYATQSALSSSR	LVTEMGTYATQSALSSSR	3	LVTEMGTYATQSALSSSR3	45842.2	39793	26407.6
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	LVTEMGTYATQSALSSSRPTK	LVTEMGTYATQSALSSSRPTK	3	LVTEMGTYATQSALSSSRPTK3	539283	653009	584399
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	LVTEMGTYATQSALSSSRPTK	LVTEMGTYATQSALSSSRPTK	4	LVTEMGTYATQSALSSSRPTK4	6010.87	8671.64	7879.46
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	LVTETYSPVMLIK	LVTETYSPVMLIK	2	LVTETYSPVMLIK2	166768	195423	188584
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	LVTETYSPVMLIK	LVTETYSPVMLIK	3	LVTETYSPVMLIK3	4352.98	4488.49	6020.71
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	LVTFENVTGQPQQGAEQPR	LVTFENVTGQPQQGAEQPR	3	LVTFENVTGQPQQGAEQPR3	51356.4	54433.7	41809.1
Q5M929	Q5M929	RN135_RAT	Rnf135	E3 ubiquitin-protein ligase RNF135	1	LVTFSASQK	LVTFSASQK	2	LVTFSASQK2	9944.73	5501.6	9419.07
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	LVTGDGCDR	LVTGDGC(UniMod:4)DR	2	LVTGDGC(UniMod:4)DR2	6564.9	18092.4	347043
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	LVTGIGHHVQELHR	LVTGIGHHVQELHR	2	LVTGIGHHVQELHR2	1002.52	915.249	1025.41
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	LVTGIGHHVQELHR	LVTGIGHHVQELHR	3	LVTGIGHHVQELHR3	268657	271184	238783
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	LVTGIGHHVQELHR	LVTGIGHHVQELHR	4	LVTGIGHHVQELHR4	145050	157832	156580
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	LVTGSLLACHR	LVTGSLLAC(UniMod:4)HR	3	LVTGSLLAC(UniMod:4)HR3	21179.7	25983.8	25265.6
P41562	P41562	IDHC_RAT	Idh1	Isocitrate dehydrogenase [NADP] cytoplasmic	1	LVTGWVKPIIIGR	LVTGWVKPIIIGR	3	LVTGWVKPIIIGR3	47626.3	37231.5	38596.6
F1M7Y5	F1M7Y5	KPCI_RAT	Prkci	Protein kinase C iota type	1	LVTIECGR	LVTIEC(UniMod:4)GR	2	LVTIEC(UniMod:4)GR2	13869.8	9604.94	11446.4
A0A8I5ZRG3	A0A8I5ZRG3	A0A8I5ZRG3_RAT	Frmd4b	FERM domain containing 4B	1	LVTLEAK	LVTLEAK	2	LVTLEAK2	56702.7	70978.9	78861
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	LVTLEEFLASTQR	LVTLEEFLASTQR	2	LVTLEEFLASTQR2	69390.5	70430.6	71752.3
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	LVTLEEFLASTQR	LVTLEEFLASTQR	3	LVTLEEFLASTQR3	48253.5	46889	50719.3
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	LVTLEEFLR	LVTLEEFLR	2	LVTLEEFLR2	288795	257889	271957
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	LVTLISQQATLLASNEAFK	LVTLISQQATLLASNEAFK	3	LVTLISQQATLLASNEAFK3	9290.55	15077.6	19078
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	LVTLISQQATLLASNEAFKK	LVTLISQQATLLASNEAFKK	3	LVTLISQQATLLASNEAFKK3	26677	29187.5	18161.3
A0A8I6AEZ7	A0A8I6AEZ7	A0A8I6AEZ7_RAT	Crlf3	Cytokine receptor-like factor 3	1	LVTLLQEVDTIEQETIKPLDDCQK	LVTLLQEVDTIEQETIKPLDDC(UniMod:4)QK	3	LVTLLQEVDTIEQETIKPLDDC(UniMod:4)QK3	95180.9	81946.5	76026.2
A0A8I6AEZ7	A0A8I6AEZ7	A0A8I6AEZ7_RAT	Crlf3	Cytokine receptor-like factor 3	1	LVTLLQEVDTIEQETIKPLDDCQK	LVTLLQEVDTIEQETIKPLDDC(UniMod:4)QK	4	LVTLLQEVDTIEQETIKPLDDC(UniMod:4)QK4	18217.8	20992.4	13568.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LVTLLSGSLTSQGVELNADILGTDK	LVTLLSGSLTSQGVELNADILGTDK	3	LVTLLSGSLTSQGVELNADILGTDK3	41222	74812.2	59213.8
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	LVTLPEAIHFLTEIEVLDVR	LVTLPEAIHFLTEIEVLDVR	3	LVTLPEAIHFLTEIEVLDVR3		29978.2	28769.5
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	LVTLPEAIHFLTEIEVLDVR	LVTLPEAIHFLTEIEVLDVR	4	LVTLPEAIHFLTEIEVLDVR4		2371.89	
Q5RJR8	Q5RJR8	LRC59_RAT	Lrrc59	Leucine-rich repeat-containing protein 59	1	LVTLPVSFAQLK	LVTLPVSFAQLK	2	LVTLPVSFAQLK2	175516	146843	189675
Q5RJR8	Q5RJR8	LRC59_RAT	Lrrc59	Leucine-rich repeat-containing protein 59	1	LVTLPVSFAQLK	LVTLPVSFAQLK	3	LVTLPVSFAQLK3	5612.63	5222.68	2041.33
P09527	P09527	RAB7A_RAT	Rab7a	Ras-related protein Rab-7a	1	LVTMQIWDTAGQER	LVTMQIWDTAGQER	2	LVTMQIWDTAGQER2	196380	163176	158945
P09527	P09527	RAB7A_RAT	Rab7a	Ras-related protein Rab-7a	1	LVTMQIWDTAGQER	LVTMQIWDTAGQER	3	LVTMQIWDTAGQER3	81104.8	87348.6	58047.5
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	LVTNLSGQLSELK	LVTNLSGQLSELK	2	LVTNLSGQLSELK2	48280.9	44332	40693.5
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	LVTNLSGQLSELKDQMTEQR	LVTNLSGQLSELKDQMTEQR	3	LVTNLSGQLSELKDQMTEQR3	17677.2	25752.8	24256.4
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	LVTNNIFQPEIMER	LVTNNIFQPEIMER	2	LVTNNIFQPEIMER2	4524.35	3362.64	
Q63663	Q63663	GBP2_RAT	Gbp2	Guanylate-binding protein 2	1	LVTPDEYLEHSLTLK	LVTPDEYLEHSLTLK	2	LVTPDEYLEHSLTLK2	7955.93		5523.64
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	LVTPEDDEPDEPK	LVTPEDDEPDEPK	2	LVTPEDDEPDEPK2	87038.4	106290	91689.5
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	LVTPEGAPAPGLR	LVTPEGAPAPGLR	2	LVTPEGAPAPGLR2	61494.6	64980.4	80871.4
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	LVTPGSANETSSILVESVTR	LVTPGSANETSSILVESVTR	3	LVTPGSANETSSILVESVTR3	3875.55	3930.39	4818.79
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LVTQDNFGYDLAAVEAAK	LVTQDNFGYDLAAVEAAK	2	LVTQDNFGYDLAAVEAAK2	25895.8	20364.1	28282.8
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LVTQDNFGYDLAAVEAAK	LVTQDNFGYDLAAVEAAK	3	LVTQDNFGYDLAAVEAAK3	14187.5	13689.8	20068
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LVTQDNFGYDLAAVEAAKK	LVTQDNFGYDLAAVEAAKK	3	LVTQDNFGYDLAAVEAAKK3	6871.86	12476.6	11667.9
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	LVTQIIK	LVTQIIK	2	LVTQIIK2	82363.8	73653.5	72491.9
D3ZSQ1	D3ZSQ1	D3ZSQ1_RAT	Pcnx3	Pecanex-like protein	1	LVTQLDR	LVTQLDR	2	LVTQLDR2	49585.4	23427.2	49596.1
Q63525	Q63525	NUDC_RAT	Nudc	Nuclear migration protein nudC	1	LVTSDPEINTK	LVTSDPEINTK	2	LVTSDPEINTK2	49671.9	46435.4	46057.3
P53534	P53534	PYGB_RAT	Pygb	Glycogen phosphorylase, brain form (Fragment)	1	LVTSIGDVVNHDPVVGDR	LVTSIGDVVNHDPVVGDR	3	LVTSIGDVVNHDPVVGDR3	40841.5	46099.2	22946.4
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	LVTSKGDKELLIGNEK	LVTSKGDKELLIGNEK	3	LVTSKGDKELLIGNEK3		2464.76	2829.23
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	LVTSKGDKELLIGNEK	LVTSKGDKELLIGNEK	4	LVTSKGDKELLIGNEK4	16928.7	23518.4	18402.9
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	LVTSPCCIVTSTYGWTANMER	LVTSPC(UniMod:4)C(UniMod:4)IVTSTYGWTANMER	3	LVTSPC(UniMod:4)C(UniMod:4)IVTSTYGWTANMER3	391344	562497	568323
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	LVTSVAEVVNNDPMVGSK	LVTSVAEVVNNDPMVGSK	2	LVTSVAEVVNNDPMVGSK2	37830.8	35809.6	30517.5
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	LVTSVAEVVNNDPMVGSK	LVTSVAEVVNNDPMVGSK	3	LVTSVAEVVNNDPMVGSK3	28538.4	23538.3	22631.9
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	LVTTGIPVVKPR	LVTTGIPVVKPR	3	LVTTGIPVVKPR3	27460.6	40529.1	29018.3
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	LVTTVTEIAG	LVTTVTEIAG	2	LVTTVTEIAG2	62705.7	62047.7	26576.2
Q9WTV0	Q9WTV0	PREB_RAT	Preb	Prolactin regulatory element-binding protein	1	LVTVGWDFK	LVTVGWDFK	2	LVTVGWDFK2	17998.4	28033.9	24523.1
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	LVTVMLTR	LVTVMLTR	2	LVTVMLTR2	14323	10001.9	10506.8
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	LVTVTTSVGTGTR	LVTVTTSVGTGTR	2	LVTVTTSVGTGTR2		5567.84	3753.27
Q64620	Q64620	PPP6_RAT	Ppp6c	Serine/threonine-protein phosphatase 6 catalytic subunit	1	LVTVWSAPNYCYR	LVTVWSAPNYC(UniMod:4)YR	2	LVTVWSAPNYC(UniMod:4)YR2	285582	307023	268596
Q64620	Q64620	PPP6_RAT	Ppp6c	Serine/threonine-protein phosphatase 6 catalytic subunit	1	LVTVWSAPNYCYR	LVTVWSAPNYC(UniMod:4)YR	3	LVTVWSAPNYC(UniMod:4)YR3	13262	16796.8	19606
P14882	P14882	PCCA_RAT	Pcca	Propionyl-CoA carboxylase alpha chain, mitochondrial	1	LVTYGSDR	LVTYGSDR	2	LVTYGSDR2	42155.3		48164.5
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	LVVACEDVR	LVVAC(UniMod:4)EDVR	2	LVVAC(UniMod:4)EDVR2	28239.8	18884.2	19322.9
Q5U300	Q5U300;A0A8I5ZVX0;A0A8I6A544	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	0	LVVADTR	LVVADTR	2	LVVADTR2	429711	443252	344063
Q5BJM8	Q5BJM8	ZNT7_RAT	Slc30a7	Zinc transporter 7	1	LVVAPDADAR	LVVAPDADAR	2	LVVAPDADAR2	54334.9	64348.1	58315
A0A8I6G3Q5	A0A8I6G3Q5	A0A8I6G3Q5_RAT	Uprt	Uracil phosphoribosyltransferase homolog	1	LVVEEGLNQLPYK	LVVEEGLNQLPYK	2	LVVEEGLNQLPYK2	3742.78	1543.73	4970.79
D4A264	D4A264	D4A264_RAT	Ptgr3	Zinc binding alcohol dehydrogenase, domain containing 2	1	LVVELPHPVSSK	LVVELPHPVSSK	3	LVVELPHPVSSK3	18500.6	14017.3	17086.3
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	LVVENVDVLTQMR	LVVENVDVLTQMR	2	LVVENVDVLTQMR2	64812.8	60785.2	55684.5
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	LVVENVDVLTQMR	LVVENVDVLTQMR	3	LVVENVDVLTQMR3	21906.3	13814.5	16469.3
P80385	P80385	AAKG1_RAT	Prkag1	5'-AMP-activated protein kinase subunit gamma-1	1	LVVFDTSLQVK	LVVFDTSLQVK	2	LVVFDTSLQVK2	34809.1	34604.9	31440.5
Q05695	Q05695	L1CAM_RAT	L1cam	Neural cell adhesion molecule L1	1	LVVFPTDDISLK	LVVFPTDDISLK	2	LVVFPTDDISLK2	28343	35331.8	29876.6
Q5RJP5	Q5RJP5	Q5RJP5_RAT	Isg20	Interferon stimulated exonuclease 20	1	LVVGHDLK	LVVGHDLK	2	LVVGHDLK2	8494.17		
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	LVVGNTEIGIEMK	LVVGNTEIGIEMK	2	LVVGNTEIGIEMK2	21919.5	20749.5	26890.6
G3V6Q3	G3V6Q3	G3V6Q3_RAT	Wdr13	Uncharacterized protein	1	LVVHEGSPVTSISAR	LVVHEGSPVTSISAR	3	LVVHEGSPVTSISAR3	21298.7	30024.4	30328
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	LVVHGLLEDQFGGK	LVVHGLLEDQFGGK	3	LVVHGLLEDQFGGK3	3738.74	1732.86	4944.13
Q63228	Q63228	GMFB_RAT	Gmfb	Glia maturation factor beta	1	LVVLDEELEGVSPDELKDELPER	LVVLDEELEGVSPDELKDELPER	3	LVVLDEELEGVSPDELKDELPER3	11383.5	4793.64	14636.9
Q99M64	Q99M64	P4K2A_RAT	Pi4k2a	Phosphatidylinositol 4-kinase type 2-alpha	1	LVVLDYIIR	LVVLDYIIR	2	LVVLDYIIR2	5857.84	6165.67	4355.58
Q62636	Q62636;P62836	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	0	LVVLGSGGVGK	LVVLGSGGVGK	2	LVVLGSGGVGK2	552217	501648	485003
D4A758	D4A758	D4A758_RAT	Lrrc8b	Leucine rich repeat containing 8 VRAC subunit B	1	LVVLNNLK	LVVLNNLK	2	LVVLNNLK2	8947.11	9823.61	10237.1
Q9QX79	Q9QX79	FETUB_RAT	Fetub	Fetuin-B	1	LVVLPFPGK	LVVLPFPGK	1	LVVLPFPGK1	28398.6	22510.4	16205.8
Q9QX79	Q9QX79	FETUB_RAT	Fetub	Fetuin-B	1	LVVLPFPGK	LVVLPFPGK	2	LVVLPFPGK2	2.47305e+06	2.16506e+06	2.28973e+06
Q9QX79	Q9QX79	FETUB_RAT	Fetub	Fetuin-B	1	LVVLPFPGKEQR	LVVLPFPGKEQR	3	LVVLPFPGKEQR3	8097.81	7788.69	
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	LVVLVGPVGVGLNELK	LVVLVGPVGVGLNELK	2	LVVLVGPVGVGLNELK2	37090.3	47125.1	27708.9
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	LVVLVGPVGVGLNELKR	LVVLVGPVGVGLNELKR	3	LVVLVGPVGVGLNELKR3	4786.29	3215.64	
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	LVVNFQCDK	LVVNFQC(UniMod:4)DK	2	LVVNFQC(UniMod:4)DK2	20006.1	29299.3	18629.6
Q6AYU2	A0A8I5ZWT0;Q6AYU2	Q6AYU2_RAT	Pcbp2	Poly(rC) binding protein 2	0	LVVPASQCGSLIGK	LVVPASQC(UniMod:4)GSLIGK	2	LVVPASQC(UniMod:4)GSLIGK2	229138	209743	239866
A0A8I6AH91	A0A8I6AH91	A0A8I6AH91_RAT	Pcbp1	Poly(rC) binding protein 1	1	LVVPATQCGSLIGK	LVVPATQC(UniMod:4)GSLIGK	2	LVVPATQC(UniMod:4)GSLIGK2	475158	421592	439046
Q62844	Q62844	FYN_RAT	Fyn	Tyrosine-protein kinase Fyn	1	LVVPCHK	LVVPC(UniMod:4)HK	2	LVVPC(UniMod:4)HK2	8206.63	2066.9	2535.27
D4ABP9	D4ABP9	FBX3_RAT	Fbxo3	F-box only protein 3	1	LVVPGLLGSMALSNHYR	LVVPGLLGSMALSNHYR	3	LVVPGLLGSMALSNHYR3	7561.62	13230.2	9569.59
A0A0G2K0I6	A0A0G2K0I6	A0A0G2K0I6_RAT	Cdh5	Cadherin 5	1	LVVQISATDKDVVPVNTK	LVVQISATDKDVVPVNTK	3	LVVQISATDKDVVPVNTK3	9356.02	5384.21	8178.73
Q6P7D4	Q6P7D4	CP20A_RAT	Cyp20a1	Cytochrome P450 20A1	1	LVVSLGTADALK	LVVSLGTADALK	2	LVVSLGTADALK2	16858.4	10094.4	14004.9
O88917	O88917	AGRL1_RAT	Adgrl1	Adhesion G protein-coupled receptor L1	1	LVVSQLNPYTLR	LVVSQLNPYTLR	2	LVVSQLNPYTLR2	4962.95	2255.2	
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	LVVSSLEALESCFAVGPIIEK	LVVSSLEALESC(UniMod:4)FAVGPIIEK	3	LVVSSLEALESC(UniMod:4)FAVGPIIEK3		7590.85	7249.05
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	LVVTNLDK	LVVTNLDK	2	LVVTNLDK2	436327	516276	420821
A0A8I6AE33	A0A8I6AE33	A0A8I6AE33_RAT	Wdr37	WD repeat domain 37	1	LVVTSSR	LVVTSSR	2	LVVTSSR2	88748.3	75783.5	98159.9
A0A0G2K9Q0	A0A0G2K9Q0	A0A0G2K9Q0_RAT	Tbck	TBC1 domain containing kinase	1	LVVVAEHCER	LVVVAEHC(UniMod:4)ER	3	LVVVAEHC(UniMod:4)ER3	9760.1	3114.73	4272.31
P80385	P80385	AAKG1_RAT	Prkag1	5'-AMP-activated protein kinase subunit gamma-1	1	LVVVDEHDVVK	LVVVDEHDVVK	2	LVVVDEHDVVK2	4117.58	4341.05	1684.42
P80385	P80385	AAKG1_RAT	Prkag1	5'-AMP-activated protein kinase subunit gamma-1	1	LVVVDEHDVVK	LVVVDEHDVVK	3	LVVVDEHDVVK3	37619.6	35397.1	37430.9
P11232	P11232	THIO_RAT	Txn	Thioredoxin	1	LVVVDFSATWCGPCK	LVVVDFSATWC(UniMod:4)GPC(UniMod:4)K	2	LVVVDFSATWC(UniMod:4)GPC(UniMod:4)K2	22558.7	16641.6	12074.7
P08644	Q04970;P08644;A0A8I6AHV4;P20171;A0A8L2Q693	RASK_RAT	Kras	GTPase KRas	0	LVVVGAGGVGK	LVVVGAGGVGK	2	LVVVGAGGVGK2	21688.5	14529.1	10957
P62747	P62747	RHOB_RAT	Rhob	Rho-related GTP-binding protein RhoB	1	LVVVGDGACGK	LVVVGDGAC(UniMod:4)GK	2	LVVVGDGAC(UniMod:4)GK2	43422.4	41833.3	55583.6
D3Z8L7	Q5BJU0;D3Z8L7	RRAS_RAT	Rras	Ras-related protein R-Ras	0	LVVVGGGGVGK	LVVVGGGGVGK	2	LVVVGGGGVGK2	521346	532280	519795
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	LVVVLCNLKPQK	LVVVLC(UniMod:4)NLKPQK	3	LVVVLC(UniMod:4)NLKPQK3	26544	15946.3	16358.6
Q5BK18	Q5BK18	CIAO3_RAT	Ciao3	Cytosolic iron-sulfur assembly component 3	1	LVVVSVSPQSR	LVVVSVSPQSR	2	LVVVSVSPQSR2		1575.25	3214
A0A8I5ZY32	F1LVX2;A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	0	LVVVWTR	LVVVWTR	2	LVVVWTR2	319318	319479	310593
Q5I0C3	Q5I0C3	MCCA_RAT	Mccc1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	1	LVVWASDR	LVVWASDR	2	LVVWASDR2	35650	35944.4	39921.9
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	LVVYVPPSIR	LVVYVPPSIR	2	LVVYVPPSIR2	9326.03	23428.3	15680.1
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	LVWEDAMTQFCEAEFSVK	LVWEDAMTQFC(UniMod:4)EAEFSVK	3	LVWEDAMTQFC(UniMod:4)EAEFSVK3	104372	103217	90379
Q9JLT0	Q9JLT0	MYH10_RAT	Myh10	Myosin-10	1	LVWIPSER	LVWIPSER	2	LVWIPSER2	4199.15	7159.12	6121.72
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LVWVPSTK	LVWVPSTK	1	LVWVPSTK1	255530	229095	175764
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	LVWVPSTK	LVWVPSTK	2	LVWVPSTK2	99744.9	104270	75513.1
D3ZHQ1	D3ZHQ1	D3ZHQ1_RAT	Dpp8	Dipeptidylpeptidase 8	1	LVYFEGTK	LVYFEGTK	2	LVYFEGTK2	38504.8	40641.9	37102.2
Q6IUP3	Q6IUP3	ELP5_RAT	Elp5	Elongator complex protein 5	1	LVYHDLFRDPLNWSQPGEAAPEGPLK	LVYHDLFRDPLNWSQPGEAAPEGPLK	4	LVYHDLFRDPLNWSQPGEAAPEGPLK4	4297.09	8713.21	5927.34
B0BNA9	B0BNA9	CNO11_RAT	Cnot11	CCR4-NOT transcription complex subunit 11	1	LVYHIGLTPAK	LVYHIGLTPAK	3	LVYHIGLTPAK3	2586.21	1310.13	1919.52
P25236	P25236	SEPP1_RAT	Selenop	Selenoprotein P	1	LVYHLGLPYSFLTFPYVEEAIK	LVYHLGLPYSFLTFPYVEEAIK	3	LVYHLGLPYSFLTFPYVEEAIK3	270935	197876	230745
A0A8I6AAQ5	A0A8I6AAQ5	A0A8I6AAQ5_RAT	Gask1a	Golgi associated kinase 1A	1	LVYIDNAGNLQHPEDK	LVYIDNAGNLQHPEDK	3	LVYIDNAGNLQHPEDK3	8664.38		4138.25
E9PT66	E9PT66	E9PT66_RAT	Sf3b3	Splicing factor 3b, subunit 3	1	LVYILNR	LVYILNR	2	LVYILNR2	24540.7	24269.7	25452.3
Q6TEK3	Q6TEK3	VKORL_RAT	Vkorc1l1	Vitamin K epoxide reductase complex subunit 1-like protein 1	1	LVYLNEAWK	LVYLNEAWK	2	LVYLNEAWK2	98053.2	76051.4	94758.9
Q6TEK3	Q6TEK3	VKORL_RAT	Vkorc1l1	Vitamin K epoxide reductase complex subunit 1-like protein 1	1	LVYLNEAWKR	LVYLNEAWKR	3	LVYLNEAWKR3	9803.36	12523.5	
P62944	P52303;P62944	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	LVYLYLMNYAK	LVYLYLMNYAK	2	LVYLYLMNYAK2	121382	122951	112174
Q62773	Q62773;Q62674;F1LXN6	S28A2_RAT	Slc28a2	Sodium/nucleoside cotransporter 2	0	LVYPEVEESK	LVYPEVEESK	2	LVYPEVEESK2	24259.4	15897	25502.6
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	LVYQHDDSETIEDDIPFVATR	LVYQHDDSETIEDDIPFVATR	3	LVYQHDDSETIEDDIPFVATR3	109937	129251	106407
Q9Z1N3	Q9Z1N3	MYO9A_RAT	Myo9a	Unconventional myosin-IXa	1	LVYSSQPITCK	LVYSSQPITC(UniMod:4)K	2	LVYSSQPITC(UniMod:4)K2	2060.23		
P20786	P20786	PGFRA_RAT	Pdgfra	Platelet-derived growth factor receptor alpha	1	LVYTLTVPK	LVYTLTVPK	2	LVYTLTVPK2	49970.3	38393.3	51516.9
P07633	P07633	PCCB_RAT	Pccb	Propionyl-CoA carboxylase beta chain, mitochondrial	1	LVYVFSQDFTVFGGSLSGAHAQK	LVYVFSQDFTVFGGSLSGAHAQK	3	LVYVFSQDFTVFGGSLSGAHAQK3	15127.3	14634.8	6395.17
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	LVYVYLVR	LVYVYLVR	2	LVYVYLVR2	141865	160216	126365
Q8VII0	Q8VII0	FRMD6_RAT	Frmd6	FERM domain-containing protein 6 (Fragment)	1	LVYYTGCPTR	LVYYTGC(UniMod:4)PTR	2	LVYYTGC(UniMod:4)PTR2		6932.86	3825.03
D3ZCT7	D3ZCT7	D3ZCT7_RAT	Sec23b	Protein transport protein SEC23	1	LWACNFCFQR	LWAC(UniMod:4)NFC(UniMod:4)FQR	2	LWAC(UniMod:4)NFC(UniMod:4)FQR2	6432.17	2834.3	3805.11
B5DFC3	B5DFC3	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	1	LWACNFCYQR	LWAC(UniMod:4)NFC(UniMod:4)YQR	2	LWAC(UniMod:4)NFC(UniMod:4)YQR2	20080.2	7333.4	14419.2
P04897	P04897	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	1	LWADHGVQACFGR	LWADHGVQAC(UniMod:4)FGR	2	LWADHGVQAC(UniMod:4)FGR2	70420.8	54654.5	39220.1
P04897	P04897	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	1	LWADHGVQACFGR	LWADHGVQAC(UniMod:4)FGR	3	LWADHGVQAC(UniMod:4)FGR3	634624	680690	757956
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	LWADPGAQACFGR	LWADPGAQAC(UniMod:4)FGR	2	LWADPGAQAC(UniMod:4)FGR2	536381	532993	541685
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	LWADPGAQACFGR	LWADPGAQAC(UniMod:4)FGR	3	LWADPGAQAC(UniMod:4)FGR3	8300.92	4155.79	4877.18
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	LWAEDSTEK	LWAEDSTEK	2	LWAEDSTEK2	26116.4	39315.5	68349.8
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	LWAEDSTEKEK	LWAEDSTEKEK	2	LWAEDSTEKEK2	9594.45	3560.6	2912.38
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	LWAEDSTEKEK	LWAEDSTEKEK	3	LWAEDSTEKEK3	41007.8	53471.2	38980.7
A0A8I6A356	A0A8I6A356	A0A8I6A356_RAT	Ube2k	E2 ubiquitin-conjugating enzyme	1	LWAHVYAGAPVSSPEYTK	LWAHVYAGAPVSSPEYTK	3	LWAHVYAGAPVSSPEYTK3	14481.4	4391.42	14028.5
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	LWALLTIQQQLEQR	LWALLTIQQQLEQR	2	LWALLTIQQQLEQR2	87867.9	59479.3	58691.7
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	LWALLTIQQQLEQR	LWALLTIQQQLEQR	3	LWALLTIQQQLEQR3	220988	280658	206580
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	LWAPDSPNR	LWAPDSPNR	2	LWAPDSPNR2	22030.7	16456.9	20405.1
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	LWAYLTIEQLLEK	LWAYLTIEQLLEK	2	LWAYLTIEQLLEK2	5.09868e+06	202795	167733
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	LWAYLTIEQLLEK	LWAYLTIEQLLEK	3	LWAYLTIEQLLEK3	4.10013e+06	4.12386e+06	4.13227e+06
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	LWAYLTIEQLLEKR	LWAYLTIEQLLEKR	2	LWAYLTIEQLLEKR2	21171.6	9104.27	8763.73
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	LWAYLTIEQLLEKR	LWAYLTIEQLLEKR	3	LWAYLTIEQLLEKR3	941822	780273	725266
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	LWAYLTIEQLLEKRK	LWAYLTIEQLLEKRK	3	LWAYLTIEQLLEKRK3		13081.1	19083.1
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	LWAYLTIEQLLEKRK	LWAYLTIEQLLEKRK	4	LWAYLTIEQLLEKRK4	24315.1	27331.8	33178.7
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	LWAYLTIQELLAK	LWAYLTIQELLAK	2	LWAYLTIQELLAK2	8483.43	16558	14209.9
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	LWAYLTIQELLAK	LWAYLTIQELLAK	3	LWAYLTIQELLAK3	1.2028e+06	1.32267e+06	1.25476e+06
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	LWAYLTIQELLAKR	LWAYLTIQELLAKR	2	LWAYLTIQELLAKR2	33073.2	37093.9	16844.8
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	LWAYLTIQELLAKR	LWAYLTIQELLAKR	3	LWAYLTIQELLAKR3	156201	168667	118233
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	LWAYLTVNQLLTER	LWAYLTVNQLLTER	2	LWAYLTVNQLLTER2	478596	700476	580132
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	LWAYLTVNQLLTER	LWAYLTVNQLLTER	3	LWAYLTVNQLLTER3	378970	559178	423742
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	LWAYLTVNQLLTERSLAPTAASK	LWAYLTVNQLLTERSLAPTAASK	3	LWAYLTVNQLLTERSLAPTAASK3	15252.8		18816.4
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	LWCAVGVNLSGGK	LWC(UniMod:4)AVGVNLSGGK	2	LWC(UniMod:4)AVGVNLSGGK2	41644.3	40160	29511.2
P07943	P07943;A0A8I6A068	ALDR_RAT	Akr1b1	Aldo-keto reductase family 1 member B1	0	LWCTFHDQSMVK	LWC(UniMod:4)TFHDQSMVK	3	LWC(UniMod:4)TFHDQSMVK3	15370.4	18739.5	26240.3
A0A0G2JXN8	A0A0G2JXN8;A0A8I5ZU98	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	0	LWCVLKPGVLLIYK	LWC(UniMod:4)VLKPGVLLIYK	3	LWC(UniMod:4)VLKPGVLLIYK3	18419.9	12668.1	15440.7
F1M171	F1M171	F1M171_RAT	Leg1	Similar to RIKEN cDNA 2310057J18	1	LWDAHTSSLEYPTR	LWDAHTSSLEYPTR	2	LWDAHTSSLEYPTR2	23181.3	13988.3	8867.77
F1M171	F1M171	F1M171_RAT	Leg1	Similar to RIKEN cDNA 2310057J18	1	LWDAHTSSLEYPTR	LWDAHTSSLEYPTR	3	LWDAHTSSLEYPTR3	283959	323142	390126
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	LWDCETGK	LWDC(UniMod:4)ETGK	2	LWDC(UniMod:4)ETGK2	157938	145569	178560
Q5XIT9	Q5XIT9	MCCB_RAT	Mccc2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	1	LWDDGIIDPVDTR	LWDDGIIDPVDTR	2	LWDDGIIDPVDTR2	10304	14872.9	20260.3
A0A8I6ANL9	A0A8I6ANL9	A0A8I6ANL9_RAT	Cdc23	Cell division cycle 23	1	LWDEASTCAQK	LWDEASTC(UniMod:4)AQK	2	LWDEASTC(UniMod:4)AQK2	22361.7	25356.6	22073.4
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LWDELQTTTK	LWDELQTTTK	2	LWDELQTTTK2	119373	114412	136562
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	LWDFQGFECIR	LWDFQGFEC(UniMod:4)IR	2	LWDFQGFEC(UniMod:4)IR2	26072.1	26344.7	36898
Q5XIG8	Q5XIG8	STRAP_RAT	Strap	Serine-threonine kinase receptor-associated protein	1	LWDHATMTEVK	LWDHATMTEVK	3	LWDHATMTEVK3	79692.2	69055.8	59729.8
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	LWDHPMSSNIISR	LWDHPMSSNIISR	3	LWDHPMSSNIISR3	66052.2	93824.4	77646.5
Q6ED65	Q6ED65	EMAL5_RAT	Eml5	Echinoderm microtubule-associated protein-like 5	1	LWDIADK	LWDIADK	2	LWDIADK2	58575.5	55324.7	
D3ZPP2	D3ZPP2	D3ZPP2_RAT	Arl8a	ADP-ribosylation factor like GTPase 8A	1	LWDIGGQPR	LWDIGGQPR	2	LWDIGGQPR2			267335
D3ZUY0	D3ZUY0	D3ZUY0_RAT	Rdh14	Retinol dehydrogenase 14	1	LWDISEVMVGILK	LWDISEVMVGILK	2	LWDISEVMVGILK2	7612.65		
P63245	P63245	RACK1_RAT	Rack1	Small ribosomal subunit protein RACK1	1	LWDLTTGTTTR	LWDLTTGTTTR	2	LWDLTTGTTTR2	39707.2	36915.6	32711.9
Q04631	Q04631	FNTA_RAT	Fnta	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha	1	LWDNELQYVDQLLK	LWDNELQYVDQLLK	2	LWDNELQYVDQLLK2		2221.93	4267.86
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	LWDWDKK	LWDWDKK	2	LWDWDKK2	25222.4	26639	27052
D3ZFK6	D3ZFK6	D3ZFK6_RAT	Atg16l1	Autophagy related 16-like 1	1	LWEAFGDK	LWEAFGDK	2	LWEAFGDK2	16827.5	6904.47	12510.2
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	LWEEQQAAAK	LWEEQQAAAK	2	LWEEQQAAAK2	1.00617e+06	1.0842e+06	1.106e+06
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	LWEESLR	LWEESLR	2	LWEESLR2	85400.4	81895.7	67700.9
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	LWEGLTELVTATGNYSNYR	LWEGLTELVTATGNYSNYR	3	LWEGLTELVTATGNYSNYR3	58635.2	48381.4	36262.7
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	LWEGLTELVTATGNYSNYRR	LWEGLTELVTATGNYSNYRR	3	LWEGLTELVTATGNYSNYRR3	9788.84	6706.06	17068.2
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	LWELLCPLLR	LWELLC(UniMod:4)PLLR	2	LWELLC(UniMod:4)PLLR2	5569.91	2848.94	4319.13
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	LWERPSMQLLGLFR	LWERPSMQLLGLFR	3	LWERPSMQLLGLFR3	3695.85	5239.98	6800.89
D3ZCK2	D3ZCK2	D3ZCK2_RAT	Nkiras2	NFKB inhibitor interacting Ras-like 2	1	LWEVSVADRR	LWEVSVADRR	3	LWEVSVADRR3	9745.13	13517.4	17588.8
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	LWEYLLELLR	LWEYLLELLR	2	LWEYLLELLR2	4447.25	43451.6	18075.7
A0A0G2JY11	A0A0G2JY11	A0A0G2JY11_RAT	Tspan9	Tetraspanin	1	LWFDDNK	LWFDDNK	2	LWFDDNK2	81034.4	65981.4	83364.9
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	LWGEPVNLR	LWGEPVNLR	2	LWGEPVNLR2	60048.9	60934.8	58902.6
Q75Q41	Q75Q41	TOM22_RAT	Tomm22	Mitochondrial import receptor subunit TOM22 homolog	1	LWGLTEMFPER	LWGLTEMFPER	2	LWGLTEMFPER2	80911.1	70333.9	70752.6
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	LWGRDPEPTPCWDGLDR	LWGRDPEPTPC(UniMod:4)WDGLDR	3	LWGRDPEPTPC(UniMod:4)WDGLDR3	8528.27	5633.48	12219.7
Q07647	Q07647	GTR3_RAT	Slc2a3	Solute carrier family 2, facilitated glucose transporter member 3	1	LWGTPDVIQEIQEMK	LWGTPDVIQEIQEMK	2	LWGTPDVIQEIQEMK2	1.23586e+06	1.21349e+06	1.3609e+06
Q07647	Q07647	GTR3_RAT	Slc2a3	Solute carrier family 2, facilitated glucose transporter member 3	1	LWGTPDVIQEIQEMK	LWGTPDVIQEIQEMK	3	LWGTPDVIQEIQEMK3	45419.6	36524.5	36735.9
Q07647	Q07647	GTR3_RAT	Slc2a3	Solute carrier family 2, facilitated glucose transporter member 3	1	LWGTPDVIQEIQEMKDESIR	LWGTPDVIQEIQEMKDESIR	3	LWGTPDVIQEIQEMKDESIR3	37575	30315.8	23453.6
D4A4T9	D4A4T9	CHRD1_RAT	Chordc1	Cysteine and histidine-rich domain-containing protein 1	1	LWGVIDVK	LWGVIDVK	2	LWGVIDVK2	20851.5	15617.2	15664.9
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	LWGWASPLR	LWGWASPLR	2	LWGWASPLR2	16808.5	17224	30112.2
A0A8I6ASK6	A0A8I6ASK6	A0A8I6ASK6_RAT	Fcrl1	Fc receptor-like 1	1	LWGYHDCTHK	LWGYHDC(UniMod:4)THK	2	LWGYHDC(UniMod:4)THK2	133207	128461	108883
A0A8I6ASK6	A0A8I6ASK6	A0A8I6ASK6_RAT	Fcrl1	Fc receptor-like 1	1	LWGYHDCTHK	LWGYHDC(UniMod:4)THK	3	LWGYHDC(UniMod:4)THK3	2.51239e+06	2.25645e+06	2.46067e+06
A0A8J8XMU1	A0A8J8XMU1	A0A8J8XMU1_RAT	Ptprk	Receptor-type tyrosine-protein phosphatase kappa	1	LWHLDPDTEYEIR	LWHLDPDTEYEIR	3	LWHLDPDTEYEIR3	7173.14	5788.37	9042.06
B5DEP5	B5DEP5	B5DEP5_RAT	Trip4	Thyroid hormone receptor interactor 4	1	LWIAATGK	LWIAATGK	2	LWIAATGK2	23354.2	21377.5	18289
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	LWIDQSGEIDIVNHK	LWIDQSGEIDIVNHK	3	LWIDQSGEIDIVNHK3	29082.4	16465.4	26713.8
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	LWIEFDGEK	LWIEFDGEK	2	LWIEFDGEK2	128550	135956	106916
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	LWIEGIEHK	LWIEGIEHK	2	LWIEGIEHK2	16014.2	11300.3	8809.66
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	LWIEQYGNVEIINHK	LWIEQYGNVEIINHK	3	LWIEQYGNVEIINHK3	23396.3	23261.3	17506.9
A0A8I5ZM48	M0R838;A0A8I5ZLW7;A0A8I5ZXJ9;A0A8I6AJM2;A0A8I5ZM48	A0A8I5ZM48_RAT	ENSRNOG00000062392	Ig-like domain-containing protein	0	LWIYDTSK	LWIYDTSK	2	LWIYDTSK2	1.15113e+06	977809	1.01749e+06
A0A8I6AIR7	A0A8I6AIR7	A0A8I6AIR7_RAT	ENSRNOG00000063615	Ig-like domain-containing protein	1	LWIYDTSNR	LWIYDTSNR	2	LWIYDTSNR2	10624	9731.3	10518.7
A0A8I6ACW2	A0A8I6ACW2	A0A8I6ACW2_RAT	ENSRNOG00000069088	Ig-like domain-containing protein	1	LWIYETSK	LWIYETSK	2	LWIYETSK2	97566.5	77808.2	67554.4
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	LWLAALK	LWLAALK	2	LWLAALK2	19142.1	26796.9	30015.8
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	LWLDANPWDCSCPLK	LWLDANPWDC(UniMod:4)SC(UniMod:4)PLK	2	LWLDANPWDC(UniMod:4)SC(UniMod:4)PLK2	2.12432e+06	2.60119e+06	2.30747e+06
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	LWLDANPWDCSCPLK	LWLDANPWDC(UniMod:4)SC(UniMod:4)PLK	3	LWLDANPWDC(UniMod:4)SC(UniMod:4)PLK3	272253	469887	363085
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	LWLDNTENDLNQGDDHGFSPLHWACR	LWLDNTENDLNQGDDHGFSPLHWAC(UniMod:4)R	4	LWLDNTENDLNQGDDHGFSPLHWAC(UniMod:4)R4	123520	126119	136641
Q4AEG0	Q4AEG0	Q4AEG0_RAT	Gp9	Glycoprotein 9	1	LWLEDHMPEALSHVYCASPDLATQR	LWLEDHMPEALSHVYC(UniMod:4)ASPDLATQR	4	LWLEDHMPEALSHVYC(UniMod:4)ASPDLATQR4	35464	39958.6	36691.9
Q6AZ50	Q6AZ50	ATG3_RAT	Atg3	Ubiquitin-like-conjugating enzyme ATG3	1	LWLFGYDEQR	LWLFGYDEQR	2	LWLFGYDEQR2	119811	116643	110704
O88959	O88959	INHBE_RAT	Inhbe	Inhibin beta E chain	1	LWLHVPPSFPATLYLR	LWLHVPPSFPATLYLR	3	LWLHVPPSFPATLYLR3	5898.13	8909.06	9218.61
D4A3M8	B2RZ33;D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	0	LWLLDDSK	LWLLDDSK	2	LWLLDDSK2	245526	207024	193698
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	LWLQHNAISLLPVSAFSSLR	LWLQHNAISLLPVSAFSSLR	3	LWLQHNAISLLPVSAFSSLR3	877215	712066	474203
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	LWLQHNAISLLPVSAFSSLR	LWLQHNAISLLPVSAFSSLR	4	LWLQHNAISLLPVSAFSSLR4	2375.59	2001.8	
M0R4M1	M0R4M1	M0R4M1_RAT	Nlrc5	NLR family, CARD domain containing 5	1	LWLQLEFPR	LWLQLEFPR	2	LWLQLEFPR2	1804.28	6916.12	2413.96
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	LWLVGAHR	LWLVGAHR	2	LWLVGAHR2	89885.8	72586.6	75858.6
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	LWMEAMDGKEPIYHSPITK	LWMEAMDGKEPIYHSPITK	3	LWMEAMDGKEPIYHSPITK3	18093.6	21181.6	11082.1
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	LWMEAMDGKEPIYHSPITK	LWMEAMDGKEPIYHSPITK	4	LWMEAMDGKEPIYHSPITK4	8372.98	6467.97	8832
A7E3N2	A7E3N2	NCF2_RAT	Ncf2	Neutrophil cytosol factor 2	1	LWNEGVQAADK	LWNEGVQAADK	2	LWNEGVQAADK2	3571.74	2353.54	2282.25
Q9R0C5	Q9R0C5	GALT7_RAT	Galnt7	N-acetylgalactosaminyltransferase 7	1	LWNGLVK	LWNGLVK	2	LWNGLVK2	16012.2	19787.9	12232.2
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	LWNIPDK	LWNIPDK	2	LWNIPDK2	53491	44503.5	32624.5
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	LWNIPDKK	LWNIPDKK	2	LWNIPDKK2	39353	48842.8	52285.5
P58405	P58405	STRN3_RAT	Strn3	Striatin-3	1	LWNLDSK	LWNLDSK	2	LWNLDSK2	72983.9	72178.8	85861.6
P70483	P70483	STRN_RAT	Strn	Striatin	1	LWNLESK	LWNLESK	1	LWNLESK1	1201.11	2228.51	577.847
P70483	P70483	STRN_RAT	Strn	Striatin	1	LWNLESK	LWNLESK	2	LWNLESK2	217510	178552	271005
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	LWNNVGHALENEK	LWNNVGHALENEK	2	LWNNVGHALENEK2	2462.25	2202.51	4109.02
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	LWNNVGHALENEK	LWNNVGHALENEK	3	LWNNVGHALENEK3	58265.1	61658.5	53992.4
P58405	P58405	STRN3_RAT	Strn3	Striatin-3	1	LWNPQEK	LWNPQEK	2	LWNPQEK2	132995	103095	134742
D4A7Z0	D4A7Z0	D4A7Z0_RAT	Wdtc1	WD and tetratricopeptide repeats 1	1	LWNPRPESEDLTGR	LWNPRPESEDLTGR	3	LWNPRPESEDLTGR3	43320.1	49861.6	34743.8
A0A8I5ZTW6	A0A8I5ZTW6	A0A8I5ZTW6_RAT	Gopc	Golgi associated PDZ and coiled-coil motif containing	1	LWNQLEAEIHLHR	LWNQLEAEIHLHR	4	LWNQLEAEIHLHR4	9763.29	11692.7	8131.08
P63245	P63245	RACK1_RAT	Rack1	Small ribosomal subunit protein RACK1	1	LWNTLGVCK	LWNTLGVC(UniMod:4)K	2	LWNTLGVC(UniMod:4)K2	31941.7	22725.8	25687.7
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	LWNVDTFVPVGEMR	LWNVDTFVPVGEMR	2	LWNVDTFVPVGEMR2	10504.3	13587.1	10014
A0A8I6AVP7	A0A8I6AVP7	A0A8I6AVP7_RAT	Odr4	Protein odr-4 homolog	1	LWNVTEDEVSER	LWNVTEDEVSER	2	LWNVTEDEVSER2	8482.05		
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	LWPTLSR	LWPTLSR	2	LWPTLSR2	18880.9	23878.6	20645.7
P58751	P58751	RELN_RAT	Reln	Reelin	1	LWQPYNNGK	LWQPYNNGK	2	LWQPYNNGK2	64721.7	77099.3	80107.7
Q5XIG8	Q5XIG8	STRAP_RAT	Strap	Serine-threonine kinase receptor-associated protein	1	LWQTVVGK	LWQTVVGK	2	LWQTVVGK2	129097	141585	122969
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	LWQYLVK	LWQYLVK	2	LWQYLVK2	7172.31	9755.67	10328.8
Q5XFW8	Q5XFW8	SEC13_RAT	Sec13	Protein SEC13 homolog	1	LWREEEDGQWK	LWREEEDGQWK	3	LWREEEDGQWK3	60306.3	46569.8	28252.2
A0A8I6A6I4	A0A8I6A6I4	A0A8I6A6I4_RAT	Atp11b	Phospholipid-transporting ATPase	1	LWSASDPFYTNDR	LWSASDPFYTNDR	2	LWSASDPFYTNDR2	9117.43	9051.3	5633.41
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	LWSEIPSEIAIDDYDSSGASK	LWSEIPSEIAIDDYDSSGASK	3	LWSEIPSEIAIDDYDSSGASK3	7828.67		10534.3
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	LWSLALK	LWSLALK	2	LWSLALK2	38516.7	33605.8	42945.1
F1M6V8	F1M6V8	F1M6V8_RAT	Strn4	Striatin 4	1	LWSLDNK	LWSLDNK	2	LWSLDNK2			72624.2
A0A8I6AA52	A0A8I6AA52	A0A8I6AA52_RAT	Wdr48	WD repeat-containing protein 48	1	LWSLGQQR	LWSLGQQR	2	LWSLGQQR2	18278.9	21585.3	33299.8
D3ZNV6	D3ZNV6	D3ZNV6_RAT	Elmod2	ELMO domain containing 2	1	LWSLLMPTK	LWSLLMPTK	2	LWSLLMPTK2	13527.2	13214.9	13989.9
D3ZNV6	D3ZNV6	D3ZNV6_RAT	Elmod2	ELMO domain containing 2	1	LWSLLMPTKK	LWSLLMPTKK	3	LWSLLMPTKK3	4418.7	8068.22	8814.1
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	LWSSPAFSPTCPFR	LWSSPAFSPTC(UniMod:4)PFR	2	LWSSPAFSPTC(UniMod:4)PFR2	31346.2	29672.3	39247.5
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	LWSTWDLKPVR	LWSTWDLKPVR	3	LWSTWDLKPVR3	20677.8	31135.6	22851.2
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LWSYLQELLR	LWSYLQELLR	2	LWSYLQELLR2	67517.6	57625.3	34450.2
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	LWTEIPTK	LWTEIPTK	2	LWTEIPTK2	36376.1	26806.7	31400.7
G3V6U9	G3V6U9	SETD3_RAT	Setd3	Actin-histidine N-methyltransferase	1	LWTFLEDR	LWTFLEDR	2	LWTFLEDR2	25453.5	20200	14714
Q6AXN4	Q6AXN4	NDC1_RAT	Ndc1	Nucleoporin NDC1	1	LWTHTSDQQVSAVSNPSPCASVTAEGK	LWTHTSDQQVSAVSNPSPC(UniMod:4)ASVTAEGK	3	LWTHTSDQQVSAVSNPSPC(UniMod:4)ASVTAEGK3	2527.04	3539.47	4565.35
P18445	D3ZF07;A0A0G2K8K4;D4AAY6;P18445	RL27A_RAT	Rpl27a	Large ribosomal subunit protein uL15	0	LWTLVSEQTR	LWTLVSEQTR	2	LWTLVSEQTR2	37484.7	36414.5	46129.9
A0A8I6ARV9	A0A8I6ARV9	A0A8I6ARV9_RAT	Ctsa	Carboxypeptidase	1	LWTSLQTHCCSQNK	LWTSLQTHC(UniMod:4)C(UniMod:4)SQNK	3	LWTSLQTHC(UniMod:4)C(UniMod:4)SQNK3	8756.29	12335.1	5857.83
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	LWTVNGDLVGHVHCR	LWTVNGDLVGHVHC(UniMod:4)R	4	LWTVNGDLVGHVHC(UniMod:4)R4		4897	
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LWVEDFK	LWVEDFK	1	LWVEDFK1	7598.82	6433.87	5835.84
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	LWVEDFK	LWVEDFK	2	LWVEDFK2	1.65503e+06	2.03786e+06	1.87143e+06
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	LWVSGCR	LWVSGC(UniMod:4)R	2	LWVSGC(UniMod:4)R2	20104.5	23715.6	24916.2
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	LWVSPSGLR	LWVSPSGLR	2	LWVSPSGLR2	57204.4	86385.1	59727.7
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	LWWAAWNTWHR	LWWAAWNTWHR	3	LWWAAWNTWHR3	12360.8	14343.9	6213.31
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	LWWADQVSEK	LWWADQVSEK	2	LWWADQVSEK2	353215	450546	407144
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LWWLCDSCPASR	LWWLC(UniMod:4)DSC(UniMod:4)PASR	2	LWWLC(UniMod:4)DSC(UniMod:4)PASR2	62486.7	83172.8	68265.4
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	LWWLDLK	LWWLDLK	1	LWWLDLK1	27511.5	8248.57	14750.6
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	LWWLDLK	LWWLDLK	2	LWWLDLK2	1.14929e+06	960525	1.06279e+06
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	LWYENPGVFSPAQLTQLK	LWYENPGVFSPAQLTQLK	3	LWYENPGVFSPAQLTQLK3	19851.9	15679.6	17556.3
Q4V8I7	Q4V8I7	LRC8A_RAT	Lrrc8a	Volume-regulated anion channel subunit LRRC8A	1	LWYNHIAYIPIQIGNLTNLER	LWYNHIAYIPIQIGNLTNLER	3	LWYNHIAYIPIQIGNLTNLER3	8113.99	9671.61	4542.27
Q498T9	Q498T9	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	1	LWYNSIAYIPEHIK	LWYNSIAYIPEHIK	3	LWYNSIAYIPEHIK3	11378.7	8071.99	10897.2
Q498T9	Q498T9	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	1	LWYNSIAYIPEHIKK	LWYNSIAYIPEHIKK	4	LWYNSIAYIPEHIKK4	7744.39		
P20070	P20070	NB5R3_RAT	Cyb5r3	NADH-cytochrome b5 reductase 3	1	LWYTVDK	LWYTVDK	2	LWYTVDK2	116021	98534.1	
Q3B8R7	Q3B8R7	Q3B8R7_RAT	Mrpl47	Mitochondrial ribosomal protein L47	1	LWYVLLK	LWYVLLK	2	LWYVLLK2	10906.5	8382.48	4275.41
Q4V8K5	Q4V8K5	BROX_RAT	Brox	BRO1 domain-containing protein BROX	1	LYAEAEALCK	LYAEAEALC(UniMod:4)K	2	LYAEAEALC(UniMod:4)K2	19505.7	18338.8	20325.4
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	LYAHHLSR	LYAHHLSR	2	LYAHHLSR2	5141.82		3141.25
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	LYALEEHLSSEVQAK	LYALEEHLSSEVQAK	2	LYALEEHLSSEVQAK2	7411.99	2714.78	5812.76
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	LYALEEHLSSEVQAK	LYALEEHLSSEVQAK	3	LYALEEHLSSEVQAK3	56253.3	103209	91515.5
A0A8I6A5Y0	A0A8I6A5Y0	A0A8I6A5Y0_RAT	Vta1	Vesicle trafficking 1	1	LYAMQTGMK	LYAMQTGMK	2	LYAMQTGMK2	46591	43596	43240.2
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	LYANMFER	LYANMFER	2	LYANMFER2	18673.7	22668.9	17452.8
Q5XIG0	Q5XIG0	NUDT9_RAT	Nudt9	ADP-ribose pyrophosphatase, mitochondrial	1	LYASHSQFIK	LYASHSQFIK	3	LYASHSQFIK3	10271	14198.3	10408.7
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	LYASILQQK	LYASILQQK	2	LYASILQQK2	185842	229260	182058
F1M943	F1M943	F1M943_RAT	Armc8	Armadillo repeat-containing protein 8	1	LYASLGANDEDIR	LYASLGANDEDIR	2	LYASLGANDEDIR2	5577.65	7556.66	4515.74
F1M943	F1M943	F1M943_RAT	Armc8	Armadillo repeat-containing protein 8	1	LYASLGANDEDIRK	LYASLGANDEDIRK	3	LYASLGANDEDIRK3	8061.63	2151.04	10344.4
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	LYATVYCIPFSEK	LYATVYC(UniMod:4)IPFSEK	2	LYATVYC(UniMod:4)IPFSEK2	8681.26	22050.9	5399.81
G3V6G7	G3V6G7	G3V6G7_RAT	Pnpt1	polyribonucleotide nucleotidyltransferase	1	LYAVFTDYEHDK	LYAVFTDYEHDK	3	LYAVFTDYEHDK3	2180.22		8724.13
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	LYAVVTK	LYAVVTK	1	LYAVVTK1	20991	7091.03	6266.19
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	LYAVVTK	LYAVVTK	2	LYAVVTK2	1.65845e+06	1.691e+06	1.89916e+06
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	LYAWELAFQDK	LYAWELAFQDK	2	LYAWELAFQDK2	19363.5	18382.7	20264.3
A0A0G2JXD9	A0A0G2JXD9	A0A0G2JXD9_RAT	Dop1b	DOP1 leucine zipper like protein B	1	LYAWLLGSDIK	LYAWLLGSDIK	2	LYAWLLGSDIK2	6287.96		4975.35
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	LYAWNPK	LYAWNPK	2	LYAWNPK2	24585.8	21694.9	18666.1
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	LYCAQAEGGSEEPSPSGILK	LYC(UniMod:4)AQAEGGSEEPSPSGILK	3	LYC(UniMod:4)AQAEGGSEEPSPSGILK3	11445.4	12569.2	12644.2
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	LYCESETDPK	LYC(UniMod:4)ESETDPK	2	LYC(UniMod:4)ESETDPK2	27215.4	20828.7	29436.6
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	LYCIYVAIGQK	LYC(UniMod:4)IYVAIGQK	2	LYC(UniMod:4)IYVAIGQK2	223168	215919	216070
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	LYCIYVAIGQK	LYC(UniMod:4)IYVAIGQK	3	LYC(UniMod:4)IYVAIGQK3	14110.5	18405	8792.08
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	LYCIYVAIGQKR	LYC(UniMod:4)IYVAIGQKR	3	LYC(UniMod:4)IYVAIGQKR3	12628.4	3136.58	11782
Q68G38	Q68G38	TOR1A_RAT	Tor1a	Torsin-1A	1	LYCLFAECCGQK	LYC(UniMod:4)LFAEC(UniMod:4)C(UniMod:4)GQK	2	LYC(UniMod:4)LFAEC(UniMod:4)C(UniMod:4)GQK2	11100	14628.4	5824.1
Q4V892	Q4V892	SIGIR_RAT	Sigirr	Single Ig IL-1-related receptor	1	LYDAYVSYSDRPEDR	LYDAYVSYSDRPEDR	3	LYDAYVSYSDRPEDR3	7335.74		13544.8
Q5M7W7	Q5M7W7	SYPM_RAT	Pars2	Probable proline--tRNA ligase, mitochondrial	1	LYDDVTEALPQLR	LYDDVTEALPQLR	2	LYDDVTEALPQLR2	4915.99	3094.21	4908.83
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	LYDGLFK	LYDGLFK	2	LYDGLFK2	102746	97986.8	84663.3
Q02527	Q02527	MGAT3_RAT	Mgat3	Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase	1	LYDGWTEPFAFHMR	LYDGWTEPFAFHMR	3	LYDGWTEPFAFHMR3	6839.31	3496.14	14515.9
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	LYDILALLPPK	LYDILALLPPK	2	LYDILALLPPK2		2302.05	2405.66
O35824	O35824	DNJA2_RAT	Dnaja2	DnaJ homolog subfamily A member 2	1	LYDILGVPPGASENELKK	LYDILGVPPGASENELKK	3	LYDILGVPPGASENELKK3	82911.4	105901	90254
A0A0G2JT44	A0A0G2JT44	A0A0G2JT44_RAT	Tmc6	Transmembrane channel-like protein	1	LYDLELDPTILEEDEK	LYDLELDPTILEEDEK	2	LYDLELDPTILEEDEK2	17209.9	14776.8	9385.53
A0A0G2JT44	A0A0G2JT44	A0A0G2JT44_RAT	Tmc6	Transmembrane channel-like protein	1	LYDLELDPTILEEDEKR	LYDLELDPTILEEDEKR	3	LYDLELDPTILEEDEKR3	93886.8	87459.3	106686
B2RZ33	B2RZ33	B2RZ33_RAT	Nck1	Cytoplasmic protein	1	LYDLNMPAFVK	LYDLNMPAFVK	2	LYDLNMPAFVK2	16832.7	25148.2	19955.9
D3Z9C0	D3Z9C0	D3Z9C0_RAT	Mios	Meiosis regulator for oocyte development	1	LYDMQHTPTPIGDETEPTIIER	LYDMQHTPTPIGDETEPTIIER	3	LYDMQHTPTPIGDETEPTIIER3	7104.15	4102.6	4256.78
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	LYDNLLEQNLIR	LYDNLLEQNLIR	2	LYDNLLEQNLIR2	78249.2	70015	78280.5
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	LYDNLLEQNLIR	LYDNLLEQNLIR	3	LYDNLLEQNLIR3	3220.36	6725.74	7490.18
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	LYDPGQQYASHVR	LYDPGQQYASHVR	2	LYDPGQQYASHVR2	224683	218260	168168
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	LYDPGQQYASHVR	LYDPGQQYASHVR	3	LYDPGQQYASHVR3	1.15786e+06	1.23248e+06	1.20991e+06
A0A8I5ZTB8	A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	LYDPLLEYR	LYDPLLEYR	2	LYDPLLEYR2	52662.5	46285.3	57446.2
Q5FVL8	Q5FVL8	Q5FVL8_RAT	Abcb10	ATP binding cassette subfamily B member 10	1	LYDPSSGTVSLDGHDIR	LYDPSSGTVSLDGHDIR	3	LYDPSSGTVSLDGHDIR3	17175.7	21732.7	19775.1
D3ZMI6	D3ZMI6	D3ZMI6_RAT	Olfm4	Olfactomedin 4	1	LYDSLDNLLLYSHSR	LYDSLDNLLLYSHSR	2	LYDSLDNLLLYSHSR2	19395.2	18414.6	23924.2
D3ZMI6	D3ZMI6	D3ZMI6_RAT	Olfm4	Olfactomedin 4	1	LYDSLDNLLLYSHSR	LYDSLDNLLLYSHSR	3	LYDSLDNLLLYSHSR3	129576	157357	147704
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	LYDVETK	LYDVETK	2	LYDVETK2	38328	39525.9	44034.3
D3ZTX4	D3ZTX4	D3ZTX4_RAT	Mgam	Maltase-glucoamylase	1	LYDVFIK	LYDVFIK	2	LYDVFIK2	11187.9	3947.38	9317.05
Q66H63	Q66H63	GDAP2_RAT	Gdap2	Ganglioside-induced differentiation-associated-protein 2	1	LYDVVDIK	LYDVVDIK	2	LYDVVDIK2	33910.7	34712.9	40931.2
M0R7V3	B5DEK5;M0R7V3	M0R7V3_RAT	Apoo	MICOS complex subunit	0	LYDWGLR	LYDWGLR	2	LYDWGLR2	9699.28	10332.3	5394.51
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	LYDYCNIPLCASLSSFECGKPQVEPK	LYDYC(UniMod:4)NIPLC(UniMod:4)ASLSSFEC(UniMod:4)GKPQVEPK	4	LYDYC(UniMod:4)NIPLC(UniMod:4)ASLSSFEC(UniMod:4)GKPQVEPK4	25366.5	12160.6	16832
Q498S0	Q498S0	Q498S0_RAT	Chst12	Carbohydrate sulfotransferase	1	LYEADFVLFGYPKPENLLRD	LYEADFVLFGYPKPENLLRD	3	LYEADFVLFGYPKPENLLRD3	39788.6	21638	33717.9
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	LYEAVIDAK	LYEAVIDAK	2	LYEAVIDAK2	19777.1	22936.2	47693.9
A0A8J8XM71	A0A8J8XM71	A0A8J8XM71_RAT	Smap2	Small ArfGAP2	1	LYEAYLPETFR	LYEAYLPETFR	2	LYEAYLPETFR2	22654.1	28365.5	
F1M386	F1M386;A0A8I5YCN5	RPGF2_RAT	Rapgef2	Rap guanine nucleotide exchange factor 2	0	LYEDAQMAR	LYEDAQMAR	2	LYEDAQMAR2	10201.5	8077.27	8149.22
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	LYEDNQTSR	LYEDNQTSR	2	LYEDNQTSR2			3054.48
A0A8I6ANB2	A0A8I6ANB2	A0A8I6ANB2_RAT	Ppfibp1	PPFIA binding protein 1	1	LYEEDDLDRLEQMEDSEGTVR	LYEEDDLDRLEQMEDSEGTVR	3	LYEEDDLDRLEQMEDSEGTVR3	4779.41	2244.39	
P18422	P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	1	LYEEGSNK	LYEEGSNK	1	LYEEGSNK1	35697.9	74147	45391.1
P18422	P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	1	LYEEGSNK	LYEEGSNK	2	LYEEGSNK2	1.56672e+06	1.26006e+06	1.56428e+06
P18422	P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	1	LYEEGSNKR	LYEEGSNKR	2	LYEEGSNKR2			230248
Q63787	Q63789;Q63787	P85A_RAT	Pik3r1	Phosphatidylinositol 3-kinase regulatory subunit alpha	0	LYEEYTR	LYEEYTR	2	LYEEYTR2	22830.6	25083.4	29345.6
P12007	P12007	IVD_RAT	Ivd	Isovaleryl-CoA dehydrogenase, mitochondrial	1	LYEIGGGTSEVR	LYEIGGGTSEVR	2	LYEIGGGTSEVR2	19566.9	18386.7	20750.1
P12007	P12007	IVD_RAT	Ivd	Isovaleryl-CoA dehydrogenase, mitochondrial	1	LYEIGGGTSEVRR	LYEIGGGTSEVRR	3	LYEIGGGTSEVRR3	4637.52	5056.65	11285
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	LYENFISEFEHR	LYENFISEFEHR	3	LYENFISEFEHR3	24771.8	21479.9	10301
D3ZWS6	D3ZWS6	D3ZWS6_RAT	Naa30	N(alpha)-acetyltransferase 30, NatC catalytic subunit	1	LYENLGFVR	LYENLGFVR	2	LYENLGFVR2	12627.8	8381.89	16169.9
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	LYEPDQLQELK	LYEPDQLQELK	2	LYEPDQLQELK2	93900.4	96766	87574.5
Q5BQE6	Q5BQE6	DHC24_RAT	Dhcr24	Delta(24)-sterol reductase	1	LYEQHHVVQDMLVPMK	LYEQHHVVQDMLVPMK	3	LYEQHHVVQDMLVPMK3	6447.91	9329.29	7760.99
Q5BQE6	Q5BQE6	DHC24_RAT	Dhcr24	Delta(24)-sterol reductase	1	LYEQHHVVQDMLVPMK	LYEQHHVVQDMLVPMK	4	LYEQHHVVQDMLVPMK4	33010.2	38278.8	35404
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	LYEQILAENEK	LYEQILAENEK	2	LYEQILAENEK2	113089	117930	130700
A2RRU1	A2RRU1	GYS1_RAT	Gys1	Glycogen [starch] synthase, muscle	1	LYESLLVGSLPDMNK	LYESLLVGSLPDMNK	2	LYESLLVGSLPDMNK2	9698.19	19035.6	15316.6
A2RRU1	A2RRU1	GYS1_RAT	Gys1	Glycogen [starch] synthase, muscle	1	LYESLLVGSLPDMNK	LYESLLVGSLPDMNK	3	LYESLLVGSLPDMNK3	6282.6	5961.56	5097.73
A0A8I6ARV9	A0A8I6ARV9	A0A8I6ARV9_RAT	Ctsa	Carboxypeptidase	1	LYESMNSQYLK	LYESMNSQYLK	2	LYESMNSQYLK2	34645.6	43991	44700.9
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	LYEWISIDKDDTGAK	LYEWISIDKDDTGAK	3	LYEWISIDKDDTGAK3	15458.4	22446	28617.4
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	LYEWTTEK	LYEWTTEK	2	LYEWTTEK2	74782.5	69650.2	66136.9
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	LYFEELGK	LYFEELGK	2	LYFEELGK2	197490	205861	197494
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	LYFETPGYFSPQDLLSSEDR	LYFETPGYFSPQDLLSSEDR	3	LYFETPGYFSPQDLLSSEDR3		6699.25	
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	LYFGALFK	LYFGALFK	2	LYFGALFK2	241413	223222	214348
Q99P39	Q99P39	NFS1_RAT	Nfs1	Cysteine desulfurase	1	LYFHTDAAQAVGK	LYFHTDAAQAVGK	3	LYFHTDAAQAVGK3		3345.86	9670.34
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	LYFLQCETCHSR	LYFLQC(UniMod:4)ETC(UniMod:4)HSR	2	LYFLQC(UniMod:4)ETC(UniMod:4)HSR2	9984.69	15970.8	16934.7
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	LYFLQCETCHSR	LYFLQC(UniMod:4)ETC(UniMod:4)HSR	3	LYFLQC(UniMod:4)ETC(UniMod:4)HSR3	109119	76090.9	70290
P46101	P46101	DPP6_RAT	Dpp6	Dipeptidyl aminopeptidase-like protein 6	1	LYFLSTEDLPR	LYFLSTEDLPR	2	LYFLSTEDLPR2		2025.37	6315.83
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	LYFSDATLDK	LYFSDATLDK	2	LYFSDATLDK2	459608	581172	520323
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	LYFTHFNLELSYR	LYFTHFNLELSYR	3	LYFTHFNLELSYR3	65986.7	57026.8	51641.8
D4A105	D4A105	D4A105_RAT	Tmem63b	Transmembrane protein 63B	1	LYFTNLQSK	LYFTNLQSK	2	LYFTNLQSK2	7009.45	8516.9	12658.6
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	LYFVCEFPF	LYFVC(UniMod:4)EFPF	2	LYFVC(UniMod:4)EFPF2		37508.8	47976.5
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	LYFVMEYVNGGDLMYHIQQVGK	LYFVMEYVNGGDLMYHIQQVGK	3	LYFVMEYVNGGDLMYHIQQVGK3	22956.9	6939.84	20180.8
E9PU02	E9PU02	E9PU02_RAT	Trappc9	Trafficking protein particle complex subunit 9	1	LYGDFLSWK	LYGDFLSWK	2	LYGDFLSWK2		3032.53	
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	LYGDTDYLEER	LYGDTDYLEER	2	LYGDTDYLEER2	471578	499470	504026
Q5U2N0	Q5U2N0	PYRG2_RAT	Ctps2	CTP synthase 2	1	LYGDVPYIEER	LYGDVPYIEER	2	LYGDVPYIEER2	15083.5	22540.9	16568.4
Q5XIT9	Q5XIT9	MCCB_RAT	Mccc2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	1	LYGEEEVPAGGIITGIGR	LYGEEEVPAGGIITGIGR	2	LYGEEEVPAGGIITGIGR2	38736	36744.1	42363.3
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	LYGEVTSPLYPK	LYGEVTSPLYPK	2	LYGEVTSPLYPK2	374719	159390	150293
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	LYGFPYK	LYGFPYK	2	LYGFPYK2	102688	100572	92772
O89049	O89049	TRXR1_RAT	Txnrd1	Thioredoxin reductase 1, cytoplasmic	1	LYGGSTVK	LYGGSTVK	2	LYGGSTVK2	14767.9	9811.76	10869.3
P97576	P97576	GRPE1_RAT	Grpel1	GrpE protein homolog 1, mitochondrial	1	LYGIQGFCK	LYGIQGFC(UniMod:4)K	2	LYGIQGFC(UniMod:4)K2	10354.5	8263.68	11731.2
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	LYGLQAGR	LYGLQAGR	2	LYGLQAGR2	273583	251083	328506
O54923	O54923	EXOC6_RAT	Exoc6	Exocyst complex component 6	1	LYGLSTFK	LYGLSTFK	2	LYGLSTFK2	27304	29373.4	22404.6
Q71RP1	Q71RP1	HPSE_RAT	Hpse	Heparanase	1	LYGPDIGQPR	LYGPDIGQPR	2	LYGPDIGQPR2	193682	223387	234923
D4A1R8	D4A1R8	CPNE1_RAT	Cpne1	Copine-1	1	LYGPTNFAPIINHVAR	LYGPTNFAPIINHVAR	3	LYGPTNFAPIINHVAR3	24150.5	23964.9	22540
D3ZLA3	D3ZLA3	D3ZLA3_RAT	Cpne3	Copine 3	1	LYGPTNFSPIINHVAR	LYGPTNFSPIINHVAR	3	LYGPTNFSPIINHVAR3	19676.6	23611.2	29862
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	LYGRDNEDYDPQTVR	LYGRDNEDYDPQTVR	2	LYGRDNEDYDPQTVR2		7740.72	5739.08
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	LYGRDNEDYDPQTVR	LYGRDNEDYDPQTVR	3	LYGRDNEDYDPQTVR3	34265.1	51561.9	46596.1
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	LYGSGGPPPTGEEDTSEK	LYGSGGPPPTGEEDTSEK	2	LYGSGGPPPTGEEDTSEK2	40652.1	41903.3	21024.8
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	LYGSGGPPPTGEEDTSEKDEL	LYGSGGPPPTGEEDTSEKDEL	3	LYGSGGPPPTGEEDTSEKDEL3	65012.6	47242.6	63940.4
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	LYGSSCSR	LYGSSC(UniMod:4)SR	2	LYGSSC(UniMod:4)SR2		28020	
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	LYGSSGPELR	LYGSSGPELR	2	LYGSSGPELR2	217291	382679	433495
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	LYGSSGPELRR	LYGSSGPELRR	3	LYGSSGPELRR3	27168	41779.1	39742
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	LYGSSGVSSLAK	LYGSSGVSSLAK	2	LYGSSGVSSLAK2	140127	124404	137074
P03994	P03994	HPLN1_RAT	Hapln1	Hyaluronan and proteoglycan link protein 1	1	LYGVYCFR	LYGVYC(UniMod:4)FR	2	LYGVYC(UniMod:4)FR2	12888.3	15451.7	16048.5
Q5FVF4	Q5FVF4	TM7S3_RAT	Tm7sf3	Transmembrane 7 superfamily member 3	1	LYGWVAR	LYGWVAR	2	LYGWVAR2	39113.8	97972	48504.2
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	LYHAHTYQHLQDVDIEPYVSK	LYHAHTYQHLQDVDIEPYVSK	4	LYHAHTYQHLQDVDIEPYVSK4	34039.7	36446.1	27267.7
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	LYHDIAQQAFK	LYHDIAQQAFK	2	LYHDIAQQAFK2	39521.8	34151.7	36525.1
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	LYHDIAQQAFK	LYHDIAQQAFK	3	LYHDIAQQAFK3	60076.1	69387.5	57645
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	LYHEQLLANLSAIQEQWETK	LYHEQLLANLSAIQEQWETK	3	LYHEQLLANLSAIQEQWETK3	68900	36687.9	59840.7
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	LYHIQGIEGQSMEVSNIVDIR	LYHIQGIEGQSMEVSNIVDIR	3	LYHIQGIEGQSMEVSNIVDIR3	13613.3	10436.2	14364.6
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	LYHISPADSGEYVCQVAGSSHPEHEASFK	LYHISPADSGEYVC(UniMod:4)QVAGSSHPEHEASFK	4	LYHISPADSGEYVC(UniMod:4)QVAGSSHPEHEASFK4	24785.1	23447.6	23732.7
A0A8I6AIH6	A0A8I6AIH6	A0A8I6AIH6_RAT	Suclg2	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial	1	LYHLFLK	LYHLFLK	2	LYHLFLK2	21368.8	19387.8	19914.5
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	LYHLIASQNSEK	LYHLIASQNSEK	2	LYHLIASQNSEK2	186002	162122	149872
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	LYHLIASQNSEK	LYHLIASQNSEK	3	LYHLIASQNSEK3	275933	261891	243635
Q6AYE5	Q6AYE5	OAF_RAT	Oaf	Out at first protein homolog	1	LYHNEIIPSEAMAK	LYHNEIIPSEAMAK	3	LYHNEIIPSEAMAK3	12921.2	25437.6	13578.3
A0A8I5ZQQ3	A0A8I5ZQQ3	A0A8I5ZQQ3_RAT	Pdpr	Pyruvate dehydrogenase phosphatase regulatory subunit	1	LYHQLEQETGIQTGYLR	LYHQLEQETGIQTGYLR	3	LYHQLEQETGIQTGYLR3	6755.84	6923.33	
D3ZUN5	D3ZUN5	D3ZUN5_RAT	Pofut2	GDP-fucose protein O-fucosyltransferase 2	1	LYHWQSPDIHQVR	LYHWQSPDIHQVR	4	LYHWQSPDIHQVR4	8293.64	7145.95	8679.21
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	LYIDETVNDNIPLNLR	LYIDETVNDNIPLNLR	2	LYIDETVNDNIPLNLR2	107719	113021	77428.2
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	LYIDETVNDNIPLNLR	LYIDETVNDNIPLNLR	3	LYIDETVNDNIPLNLR3	1.9548e+07	1.71649e+07	1.75094e+07
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	LYIDETVNDNIPLNLRVLR	LYIDETVNDNIPLNLRVLR	3	LYIDETVNDNIPLNLRVLR3		10926.4	
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	LYIDQTDSIPK	LYIDQTDSIPK	2	LYIDQTDSIPK2	438667	434918	427983
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	LYIEFVK	LYIEFVK	1	LYIEFVK1	1382.67	3302.91	3526.32
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	LYIEFVK	LYIEFVK	2	LYIEFVK2	244513	210122	270494
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	LYIFQASPADAGEYVCR	LYIFQASPADAGEYVC(UniMod:4)R	3	LYIFQASPADAGEYVC(UniMod:4)R3	15876.9	12206.5	11626
P40112	P40112	PSB3_RAT	Psmb3	Proteasome subunit beta type-3	1	LYIGLAGLATDVQTVAQR	LYIGLAGLATDVQTVAQR	2	LYIGLAGLATDVQTVAQR2	275107	230252	199306
P40112	P40112	PSB3_RAT	Psmb3	Proteasome subunit beta type-3	1	LYIGLAGLATDVQTVAQR	LYIGLAGLATDVQTVAQR	3	LYIGLAGLATDVQTVAQR3	395754	299207	352492
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	LYIQQIVQR	LYIQQIVQR	2	LYIQQIVQR2	5242.4	3981.06	7266.95
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	LYISQESDKDAHLIPDHTIR	LYISQESDKDAHLIPDHTIR	4	LYISQESDKDAHLIPDHTIR4	14552.1	12768.8	7619.58
Q6AXQ4	Q6AXQ4	MTM1_RAT	Mtm1	Myotubularin	1	LYITNYR	LYITNYR	2	LYITNYR2	13837.1	9947.5	21346.6
A0A0G2K427	A0A0G2K427	A0A0G2K427_RAT	Ivns1abp	Influenza virus NS1A binding protein	1	LYIVGGSDPYGQK	LYIVGGSDPYGQK	2	LYIVGGSDPYGQK2	10654.8	8249.14	13997.1
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	LYIYHITGQGPPSLLLSK	LYIYHITGQGPPSLLLSK	3	LYIYHITGQGPPSLLLSK3	8166.71	4043.32	10421.5
Q62985	Q62985	SH2B1_RAT	Sh2b1	SH2B adapter protein 1	1	LYLASHPQYAEPGAEAAFSGR	LYLASHPQYAEPGAEAAFSGR	3	LYLASHPQYAEPGAEAAFSGR3	5798.69	12619.3	8157.3
A0A8I5ZTW6	A0A8I5ZTW6	A0A8I5ZTW6_RAT	Gopc	Golgi associated PDZ and coiled-coil motif containing	1	LYLDELEGGGNSGASCK	LYLDELEGGGNSGASC(UniMod:4)K	2	LYLDELEGGGNSGASC(UniMod:4)K2	14717.2		5795.97
B5DFG7	B5DFG7	B5DFG7_RAT	Cytl1	Cytl1 protein	1	LYLDIHNYCVLTK	LYLDIHNYC(UniMod:4)VLTK	3	LYLDIHNYC(UniMod:4)VLTK3	27164.3	14966	16239.8
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	LYLEDDDPVQAEAYINR	LYLEDDDPVQAEAYINR	3	LYLEDDDPVQAEAYINR3	25007.1	21535.2	
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	LYLEGSAPASQVSAK	LYLEGSAPASQVSAK	2	LYLEGSAPASQVSAK2	18940.8	17384.9	18808.6
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	LYLEREEYGK	LYLEREEYGK	3	LYLEREEYGK3	168261	215484	216034
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	LYLEVTDSK	LYLEVTDSK	2	LYLEVTDSK2	329048	416924	323929
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	LYLEVTDSKK	LYLEVTDSKK	3	LYLEVTDSKK3	4930.4	6963.78	9739.57
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	LYLEWINK	LYLEWINK	2	LYLEWINK2	5037.27	7788.28	5701.83
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	LYLEWINKK	LYLEWINKK	3	LYLEWINKK3	11108.6	6575.75	13927.6
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	LYLFGLENAELAHEWVK	LYLFGLENAELAHEWVK	3	LYLFGLENAELAHEWVK3	27923.3	31305.5	40182.6
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	LYLGHSYVTAIR	LYLGHSYVTAIR	2	LYLGHSYVTAIR2	231406	268739	217714
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	LYLGHSYVTAIR	LYLGHSYVTAIR	3	LYLGHSYVTAIR3	6.06691e+06	6.85165e+06	6.74671e+06
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	LYLINSPVVR	LYLINSPVVR	2	LYLINSPVVR2	77202.1	87112.7	99657.6
A0A8I6ALT5	A0A8I6ALT5	A0A8I6ALT5_RAT	Dok2	Docking protein 2	1	LYLLAAPSTER	LYLLAAPSTER	2	LYLLAAPSTER2	59468.1	56612.6	59206.2
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	LYLLNMGGPQDIHVVHFHGQILLDNR	LYLLNMGGPQDIHVVHFHGQILLDNR	4	LYLLNMGGPQDIHVVHFHGQILLDNR4	30520.6	48625.2	38544.9
A0A8I5Y4X4	A0A8I5Y4X4	A0A8I5Y4X4_RAT	Nub1	Negative regulator of ubiquitin-like proteins 1	1	LYLLQGIR	LYLLQGIR	2	LYLLQGIR2	51524	51234.6	50605.7
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	LYLNETFSELR	LYLNETFSELR	2	LYLNETFSELR2	7325.96	7944.7	6480.76
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	LYLNSNK	LYLNSNK	1	LYLNSNK1	5410.5	10572.8	7075.13
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	LYLNSNK	LYLNSNK	2	LYLNSNK2	493510	678412	584584
P20069	P20069	MPPA_RAT	Pmpca	Mitochondrial-processing peptidase subunit alpha	1	LYLNVLNR	LYLNVLNR	2	LYLNVLNR2	16329.1	11722.4	18950.4
A0A8I5ZYB9	A0A8I5ZYB9	A0A8I5ZYB9_RAT	Lrrc32	Leucine rich repeat containing 32	1	LYLQGNPLSCCGNGWLAAQLHQGR	LYLQGNPLSC(UniMod:4)C(UniMod:4)GNGWLAAQLHQGR	3	LYLQGNPLSC(UniMod:4)C(UniMod:4)GNGWLAAQLHQGR3	62719.7	46573.4	40749.1
M0R5F1	M0R5F1	M0R5F1_RAT	Aspn	Asporin	1	LYLSHNQLSEIPLNLPR	LYLSHNQLSEIPLNLPR	3	LYLSHNQLSEIPLNLPR3	302102	333016	297791
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	LYLTNSK	LYLTNSK	2	LYLTNSK2	232761	285539	257612
Q9Z1K9	Q9Z1K9	ADA17_RAT	Adam17	Disintegrin and metalloproteinase domain-containing protein 17	1	LYLTSSTER	LYLTSSTER	2	LYLTSSTER2	11865.9	8399.65	9422.48
Q2PQA9	P56536;Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	0	LYLVDLAGSEK	LYLVDLAGSEK	2	LYLVDLAGSEK2	163373	159464	166503
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	LYLVSPEGEVQWR	LYLVSPEGEVQWR	2	LYLVSPEGEVQWR2	14687.7	14882.1	14653.8
Q496Z0	Q496Z0	ELP2_RAT	Elp2	Elongator complex protein 2	1	LYMKPTSLETEDGSIR	LYMKPTSLETEDGSIR	3	LYMKPTSLETEDGSIR3	17992	11090.9	11968.9
Q8VII0	Q8VII0	FRMD6_RAT	Frmd6	FERM domain-containing protein 6 (Fragment)	1	LYMNLQPVLR	LYMNLQPVLR	2	LYMNLQPVLR2	10460.6	10287.8	14080.5
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	LYMNPGAESEFK	LYMNPGAESEFK	2	LYMNPGAESEFK2	40072.5	46597.8	64497.1
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	LYMVLITTK	LYMVLITTK	2	LYMVLITTK2	213942	195412	216098
E9PU64	E9PU64	E9PU64_RAT	Scin	Scinderin	1	LYMVSDASGSMK	LYMVSDASGSMK	2	LYMVSDASGSMK2	1276.81		
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	LYMYCTEPFR	LYMYC(UniMod:4)TEPFR	2	LYMYC(UniMod:4)TEPFR2	5297.68	1513.43	
P18266	P18266	GSK3B_RAT	Gsk3b	Glycogen synthase kinase-3 beta	1	LYMYQLFR	LYMYQLFR	2	LYMYQLFR2	19415.7	10768.1	9162.79
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	LYNDLWK	LYNDLWK	2	LYNDLWK2	28032.3	23887.2	21792.2
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	LYNDRIFNTHTFCAGPAYLK	LYNDRIFNTHTFC(UniMod:4)AGPAYLK	4	LYNDRIFNTHTFC(UniMod:4)AGPAYLK4	2941.71	5301.1	3380.18
Q64194	Q64194	LICH_RAT	Lipa	Lysosomal acid lipase/cholesteryl ester hydrolase	1	LYNEVVSLMK	LYNEVVSLMK	2	LYNEVVSLMK2	16285.2	24634.9	25838
Q6AYT7	Q6AYT7	ABD12_RAT	Abhd12	Lysophosphatidylserine lipase ABHD12	1	LYNIAAPSR	LYNIAAPSR	2	LYNIAAPSR2	42132.5	78565.1	65992.1
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	LYNLFLK	LYNLFLK	2	LYNLFLK2	173001	123975	164490
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	LYNLLLLR	LYNLLLLR	2	LYNLLLLR2	129691	164436	175960
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	LYNNITFEELGALLEIPAAK	LYNNITFEELGALLEIPAAK	3	LYNNITFEELGALLEIPAAK3	2923.1		
B0BNI6	B0BNI6	B0BNI6_RAT	Slc25a35	Solute carrier family 25, member 35	1	LYNQPTDTR	LYNQPTDTR	2	LYNQPTDTR2	15507.3	13626.6	14491.5
Q497B0	Q497B0	NIT2_RAT	Nit2	Omega-amidase NIT2	1	LYNTCAVFGPDGNLLVK	LYNTC(UniMod:4)AVFGPDGNLLVK	2	LYNTC(UniMod:4)AVFGPDGNLLVK2	17467.4	16229	21438
Q497B0	Q497B0	NIT2_RAT	Nit2	Omega-amidase NIT2	1	LYNTCAVFGPDGNLLVK	LYNTC(UniMod:4)AVFGPDGNLLVK	3	LYNTC(UniMod:4)AVFGPDGNLLVK3	8627.73	7596.77	5881.85
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	LYNYIFNPVLQR	LYNYIFNPVLQR	2	LYNYIFNPVLQR2	6656.62	9196.6	6006.41
A0A8I5Y176	A0A8I5Y176	A0A8I5Y176_RAT	Ranbp9	RAN binding protein 9	1	LYPAVDEQETPLPR	LYPAVDEQETPLPR	2	LYPAVDEQETPLPR2	17155	12187.4	6312.07
D3Z7Z5	D3Z7Z5	D3Z7Z5_RAT	Ranbp10	RAN binding protein 10	1	LYPAVNQHETPLPR	LYPAVNQHETPLPR	3	LYPAVNQHETPLPR3	13791.5	12886.4	17409.5
D4A3W2	D4A3W2	D4A3W2_RAT	Crb2	Crumbs cell polarity complex component 2	1	LYPDDTQPWGGPFR	LYPDDTQPWGGPFR	2	LYPDDTQPWGGPFR2	24468.6	25975.8	31593.7
F7FFW7	F7FFW7	F7FFW7_RAT	Atp6v0d1	ATPase H+ transporting V0 subunit D1	1	LYPEGLAQLAR	LYPEGLAQLAR	2	LYPEGLAQLAR2	362524	333013	342909
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	LYPELPAEIAEVPSLVAVKPLLR	LYPELPAEIAEVPSLVAVKPLLR	3	LYPELPAEIAEVPSLVAVKPLLR3	20172.7	15706.4	9427.75
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	LYPELPSQPELAPFTK	LYPELPSQPELAPFTK	2	LYPELPSQPELAPFTK2	17122.6	15695.5	13471.3
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	LYPELPSQPELAPFTK	LYPELPSQPELAPFTK	3	LYPELPSQPELAPFTK3	4845.54	4048.34	6013.96
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	LYPEVHYLDNIR	LYPEVHYLDNIR	3	LYPEVHYLDNIR3	24880.7	20714.3	12782.5
A0A0G2JTM9	A0A0G2JTM9	A0A0G2JTM9_RAT	Dnajb14	DnaJ heat shock protein family (Hsp40) member B14	1	LYPLPAAR	LYPLPAAR	2	LYPLPAAR2	16054.5	19463.6	17540.4
P20673	P20673	ARLY_RAT	Asl	Argininosuccinate lyase	1	LYPNDEDIHTANER	LYPNDEDIHTANER	3	LYPNDEDIHTANER3	8999.6	19325.9	
G3V6G7	G3V6G7	G3V6G7_RAT	Pnpt1	polyribonucleotide nucleotidyltransferase	1	LYPNMTAVLLHNSQLDQR	LYPNMTAVLLHNSQLDQR	3	LYPNMTAVLLHNSQLDQR3	2017.11		11361.3
A0A8I5ZZ89	A0A8I5ZZ89	A0A8I5ZZ89_RAT	Elp3	Elongator complex protein 3	1	LYPTLVIR	LYPTLVIR	2	LYPTLVIR2	20409.8	14465.2	10717.4
A0A8I5ZQQ3	A0A8I5ZQQ3	A0A8I5ZQQ3_RAT	Pdpr	Pyruvate dehydrogenase phosphatase regulatory subunit	1	LYPVTSFFTHK	LYPVTSFFTHK	2	LYPVTSFFTHK2	3328.48		
A0A8I5ZQQ3	A0A8I5ZQQ3	A0A8I5ZQQ3_RAT	Pdpr	Pyruvate dehydrogenase phosphatase regulatory subunit	1	LYPVTSFFTHK	LYPVTSFFTHK	3	LYPVTSFFTHK3	8230.26	8682.71	3593.25
Q9JJM9	Q9JJM9	SEPT5_RAT	Septin5	Septin-5	1	LYPWGIVEVENQAHCDFVK	LYPWGIVEVENQAHC(UniMod:4)DFVK	3	LYPWGIVEVENQAHC(UniMod:4)DFVK3	55160.3	43436.4	55264.4
Q91Y81	Q91Y81	SEPT2_RAT	Septin2	Septin-2	1	LYPWGVVEVENPEHNDFLK	LYPWGVVEVENPEHNDFLK	3	LYPWGVVEVENPEHNDFLK3	37841.5	31356.9	46666.4
Q6IRJ7	Q6IRJ7;A0A8I5ZY79	Q6IRJ7_RAT	Anxa7	Annexin	0	LYQAGEGR	LYQAGEGR	2	LYQAGEGR2	179437	194930	193469
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	LYQAIQR	LYQAIQR	2	LYQAIQR2	31007.9	24443.3	32457.2
A0A8I6A502	A0A8I6A502	A0A8I6A502_RAT	Tns3	Tensin 3	1	LYQAMQPVYTSGIYNVGSENPSR	LYQAMQPVYTSGIYNVGSENPSR	3	LYQAMQPVYTSGIYNVGSENPSR3	8770.43	8856.06	11421.9
P97521	P97521	MCAT_RAT	Slc25a20	Mitochondrial carnitine/acylcarnitine carrier protein	1	LYQEFGIR	LYQEFGIR	2	LYQEFGIR2	184159	186032	225029
A0A8I5ZK89	A0A8I5ZK89	A0A8I5ZK89_RAT	Dock5	Dedicator of cytokinesis 5	1	LYQEIISYFDK	LYQEIISYFDK	2	LYQEIISYFDK2		1182.67	
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	LYQEMFAWK	LYQEMFAWK	2	LYQEMFAWK2	63884.6	97863.9	65519.6
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	LYQEVEIASVDAFQGR	LYQEVEIASVDAFQGR	2	LYQEVEIASVDAFQGR2	2848.87		2363.27
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	LYQGGPGGGGSSGGPTIEEVD	LYQGGPGGGGSSGGPTIEEVD	2	LYQGGPGGGGSSGGPTIEEVD2	9351	9266.24	7702.1
P18292	P18292	THRB_RAT	F2	Prothrombin	1	LYQGNLAVTTLGSPCLAWDSLPTK	LYQGNLAVTTLGSPC(UniMod:4)LAWDSLPTK	3	LYQGNLAVTTLGSPC(UniMod:4)LAWDSLPTK3	226021	265319	205239
P18292	P18292	THRB_RAT	F2	Prothrombin	1	LYQGNLAVTTLGSPCLAWDSLPTK	LYQGNLAVTTLGSPC(UniMod:4)LAWDSLPTK	4	LYQGNLAVTTLGSPC(UniMod:4)LAWDSLPTK4	222971	318432	372214
P18292	P18292	THRB_RAT	F2	Prothrombin	1	LYQGNLAVTTLGSPCLAWDSLPTKTLSK	LYQGNLAVTTLGSPC(UniMod:4)LAWDSLPTKTLSK	4	LYQGNLAVTTLGSPC(UniMod:4)LAWDSLPTKTLSK4	9550.9	13313	21594
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	LYQHAQQPGK	LYQHAQQPGK	2	LYQHAQQPGK2			141400
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	LYQHAQQPGK	LYQHAQQPGK	3	LYQHAQQPGK3	642626		101470
Q793F9	Q793F9	VPS4A_RAT	Vps4a	Vacuolar protein sorting-associated protein 4A	1	LYQHAVEYFLHAIK	LYQHAVEYFLHAIK	4	LYQHAVEYFLHAIK4	3538.6	1652.87	3103.06
Q4G069	Q4G069	RMD1_RAT	Rmdn1	Regulator of microtubule dynamics protein 1	1	LYQLLTQYK	LYQLLTQYK	2	LYQLLTQYK2	19783.4	14234.5	27569.2
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	LYQPEYQEVSTEEQR	LYQPEYQEVSTEEQR	2	LYQPEYQEVSTEEQR2	83960.8	109604	94758.8
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	LYQPEYQEVSTEEQR	LYQPEYQEVSTEEQR	3	LYQPEYQEVSTEEQR3	46670.3	69903.1	86560.7
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	LYQPEYQEVSTEEQREEISGK	LYQPEYQEVSTEEQREEISGK	3	LYQPEYQEVSTEEQREEISGK3	864930	981921	880022
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	LYQQVMAQAELR	LYQQVMAQAELR	2	LYQQVMAQAELR2	19941.1	25527.3	21820.9
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	LYQSATQAVFQK	LYQSATQAVFQK	2	LYQSATQAVFQK2	7894.48	8545.22	5660.23
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	LYQSDPSK	LYQSDPSK	2	LYQSDPSK2	64316.7	71730.9	67681
P48004	F1M6I7;P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	0	LYQTDPSGTYHAWK	LYQTDPSGTYHAWK	2	LYQTDPSGTYHAWK2	600817	464812	484408
P48004	F1M6I7;P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	0	LYQTDPSGTYHAWK	LYQTDPSGTYHAWK	3	LYQTDPSGTYHAWK3	2.07595e+06	2.40389e+06	2.7371e+06
P60901	A0A8I6A6W6;P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	0	LYQVEYAFK	LYQVEYAFK	2	LYQVEYAFK2	2.04982e+06	2.09624e+06	2.48818e+06
M0RD40	M0RD40	M0RD40_RAT	Sik3	non-specific serine/threonine protein kinase	1	LYQVMETER	LYQVMETER	2	LYQVMETER2	15054.6	11897.6	4560.29
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	LYQVSPADSGEYVCR	LYQVSPADSGEYVC(UniMod:4)R	2	LYQVSPADSGEYVC(UniMod:4)R2	33744.4	33201.8	26492.5
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	LYQVSPADSGEYVCR	LYQVSPADSGEYVC(UniMod:4)R	3	LYQVSPADSGEYVC(UniMod:4)R3	1858.79	5540.04	3513.59
D3ZUV3	D3ZUV3	D3ZUV3_RAT	Eif2a	Eukaryotic translation initiation factor 2A	1	LYQYPNFAGPQAALANK	LYQYPNFAGPQAALANK	2	LYQYPNFAGPQAALANK2	4799.99	4675.73	3428.36
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	LYRPGSVAYVSR	LYRPGSVAYVSR	3	LYRPGSVAYVSR3	62151.3	67791.8	70439.9
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	LYRPHLASDR	LYRPHLASDR	3	LYRPHLASDR3	52784.6	68087.8	61646.6
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	LYSCLDHMR	LYSC(UniMod:4)LDHMR	2	LYSC(UniMod:4)LDHMR2	3489.37	6093.84	6963.2
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	LYSCLDHMR	LYSC(UniMod:4)LDHMR	3	LYSC(UniMod:4)LDHMR3	16765.7	26940.5	17492.8
P04905	P08010;P04905;F1LXL7;P08009	GSTM1_RAT	Gstm1	Glutathione S-transferase Mu 1	0	LYSEFLGK	LYSEFLGK	2	LYSEFLGK2	62592.1	67261.1	54375.8
P50399	P50398;P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	0	LYSESLAR	LYSESLAR	2	LYSESLAR2	337288	324059	340922
A0A8I6GC23	A0A8I6GC23	A0A8I6GC23_RAT	ENSRNOG00000071049	Ig-like domain-containing protein	1	LYSEVPDR	LYSEVPDR	2	LYSEVPDR2	493226	370681	397244
A0A8I6GC23	A0A8I6GC23	A0A8I6GC23_RAT	ENSRNOG00000071049	Ig-like domain-containing protein	1	LYSEVPDRFSGSGSETEFTLK	LYSEVPDRFSGSGSETEFTLK	3	LYSEVPDRFSGSGSETEFTLK3	16471.9	27230.6	29288.8
D4A746	D4A746	D4A746_RAT	Gmppb	GDP-mannose pyrophosphorylase B	1	LYSGPGVVGNVLVDPSAR	LYSGPGVVGNVLVDPSAR	2	LYSGPGVVGNVLVDPSAR2	5430.63	7604.91	6226.95
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	LYSLDPEQK	LYSLDPEQK	2	LYSLDPEQK2	179333	183953	168158
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	LYSLFNDIHK	LYSLFNDIHK	2	LYSLFNDIHK2	20660	14331.1	13023.4
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	LYSLFNDIHK	LYSLFNDIHK	3	LYSLFNDIHK3	56535.4	55402.8	66131
P51111	P51111	HD_RAT	Htt	Huntingtin	1	LYSLLDR	LYSLLDR	2	LYSLLDR2	87276.8	86980.7	82758
B2RYX1	B2RYX1	B2RYX1_RAT	Uqcr10	Complex III subunit 9	1	LYSLLFR	LYSLLFR	2	LYSLLFR2	129884	113749	117911
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	LYSLLSDPIPEVR	LYSLLSDPIPEVR	2	LYSLLSDPIPEVR2	8559.54	16127.6	18261.5
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	LYSLPNPSVLVSLR	LYSLPNPSVLVSLR	2	LYSLPNPSVLVSLR2	17227.7	20297	15084.3
D3Z8M3	D3Z8M3	D3Z8M3_RAT	Khnyn	KH and NYN domain containing	1	LYSLSLLSLTPSR	LYSLSLLSLTPSR	2	LYSLSLLSLTPSR2	4605.02	3500.6	3869.46
Q5EGY4	Q5EGY4	YKT6_RAT	Ykt6	Synaptobrevin homolog YKT6	1	LYSLSVFYK	LYSLSVFYK	2	LYSLSVFYK2	29238.2	35226.1	45391.1
A0A0G2JZC4	A0A0G2JZC4	A0A0G2JZC4_RAT	Sema6d	Semaphorin 6D	1	LYSNLLTSR	LYSNLLTSR	2	LYSNLLTSR2	19452.7	13652.7	14580.2
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	LYSPSQIGAFVLMK	LYSPSQIGAFVLMK	2	LYSPSQIGAFVLMK2	48517.8	37417.4	45095.1
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	LYSPSQIGAFVLMK	LYSPSQIGAFVLMK	3	LYSPSQIGAFVLMK3	10321.5	7978.22	15234
B5DFD1	B5DFD1	B5DFD1_RAT	Nudcd1	NudC domain-containing protein 1	1	LYSSIDHEGSTWTIK	LYSSIDHEGSTWTIK	3	LYSSIDHEGSTWTIK3	9645.52	11910.2	12810.3
D3ZS41	D3ZS41	D3ZS41_RAT	Ecm2	Extracellular matrix protein 2	1	LYSSVVLKPQR	LYSSVVLKPQR	3	LYSSVVLKPQR3	11391.5	10656.3	4609.22
A0A8I6AD67	A0A8I6AD67	A0A8I6AD67_RAT	Parp9	Poly [ADP-ribose] polymerase	1	LYSTHNDPVYGAGIYFTK	LYSTHNDPVYGAGIYFTK	3	LYSTHNDPVYGAGIYFTK3	2446.46	10042.5	9930.58
Q68FU7	Q68FU7	COQ6_RAT	Coq6	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial	1	LYSTSTTPLVLLR	LYSTSTTPLVLLR	2	LYSTSTTPLVLLR2	2674.84	3538.21	5700.14
P85515	P85515	ACTZ_RAT	Actr1a	Alpha-centractin	1	LYSTWIGGSILASLDTFKK	LYSTWIGGSILASLDTFKK	3	LYSTWIGGSILASLDTFKK3	83257	67810.2	82472.7
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	LYSTYSTK	LYSTYSTK	1	LYSTYSTK1	32174.1	32359.4	28130.8
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	LYSTYSTK	LYSTYSTK	2	LYSTYSTK2	4.56918e+06	5.14366e+06	5.2209e+06
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	LYSVGEEVEISCLTGFK	LYSVGEEVEISC(UniMod:4)LTGFK	2	LYSVGEEVEISC(UniMod:4)LTGFK2	14854.5	13751.3	8733.82
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	LYSVHQEGNK	LYSVHQEGNK	2	LYSVHQEGNK2	44856	14689.5	12949.6
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	LYSVHQEGNK	LYSVHQEGNK	3	LYSVHQEGNK3	85800	221031	176607
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	LYSVSYLLK	LYSVSYLLK	2	LYSVSYLLK2	4.58259e+06	4.75371e+06	4.80616e+06
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	LYSVVSQLIR	LYSVVSQLIR	2	LYSVVSQLIR2	94835.3	54963.2	50186.4
D3ZTJ0	D3ZTJ0	D3ZTJ0_RAT	Rp2	Protein XRP2	1	LYSWDQR	LYSWDQR	2	LYSWDQR2	33001.9	25479.6	24378.5
D3ZP13	D3ZP13	D3ZP13_RAT	Qsox2	Sulfhydryl oxidase	1	LYTADLESGLHYLLR	LYTADLESGLHYLLR	3	LYTADLESGLHYLLR3	13899	8343.78	7379.23
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	LYTDFDEIRQEIENETER	LYTDFDEIRQEIENETER	3	LYTDFDEIRQEIENETER3	109234	104638	111055
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	LYTDLEEK	LYTDLEEK	2	LYTDLEEK2	23666.2	16811.7	
Q641Y2	Q641Y2	NDUS2_RAT	Ndufs2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	1	LYTEGYQVPPGATYTAIEAPK	LYTEGYQVPPGATYTAIEAPK	3	LYTEGYQVPPGATYTAIEAPK3	17537.8	22528.3	16879.4
D3ZBN4	D3ZBN4	D3ZBN4_RAT	Erg28	Ergosterol biosynthesis 28 homolog	1	LYTGKPNLVNGLQAR	LYTGKPNLVNGLQAR	3	LYTGKPNLVNGLQAR3	16984.7	13410.3	13436
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	LYTGLEHDLSK	LYTGLEHDLSK	3	LYTGLEHDLSK3			8425.92
Q6P6S9	Q6P6S9	ENTP5_RAT	Entpd5	Ectonucleoside triphosphate diphosphohydrolase 5	1	LYTHSYLGFGLK	LYTHSYLGFGLK	3	LYTHSYLGFGLK3	13706.9	16346	16791
Q6V0K7	Q6V0K7	OIT3_RAT	Oit3	Oncoprotein-induced transcript 3 protein	1	LYTISEGYVPNLR	LYTISEGYVPNLR	2	LYTISEGYVPNLR2	96284.1	93872.4	118881
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	LYTLPASHATR	LYTLPASHATR	3	LYTLPASHATR3	9490.65	15698.2	5893.68
P31044	P31044	PEBP1_RAT	Pebp1	Phosphatidylethanolamine-binding protein 1	1	LYTLVLTDPDAPSR	LYTLVLTDPDAPSR	2	LYTLVLTDPDAPSR2	28294.2	17777.9	9508.16
Q4AEG6	Q4AEG6	BMP10_RAT	Bmp10	Bone morphogenetic protein 10	1	LYTLVQR	LYTLVQR	2	LYTLVQR2	16586.6	9129.34	14041.2
P62902	P62902;D4ACQ2;D3ZU04;D3ZK34;D3ZZ60;D3ZX87;D3ZKU5;D4ABZ9;D3Z8W1;D3ZVF5	RL31_RAT	Rpl31	Large ribosomal subunit protein eL31	0	LYTLVTYVPVTTFK	LYTLVTYVPVTTFK	2	LYTLVTYVPVTTFK2	16392.6	11394.8	8842.71
P62902	P62902;D4ACQ2;D3ZU04;D3ZK34;D3ZZ60;D3ZX87;D3ZKU5;D4ABZ9;D3Z8W1;D3ZVF5	RL31_RAT	Rpl31	Large ribosomal subunit protein eL31	0	LYTLVTYVPVTTFK	LYTLVTYVPVTTFK	3	LYTLVTYVPVTTFK3	3276.05	1368.15	3296.64
A0A8I5XWV4	A0A8I5XWV4	A0A8I5XWV4_RAT	Tm6sf1	Transmembrane 6 superfamily member 1	1	LYTQFQEPYLKDPAAYPK	LYTQFQEPYLKDPAAYPK	3	LYTQFQEPYLKDPAAYPK3	19335.9	16728.9	27110
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	LYTSSTWSSLLMAGAWSTQSYK	LYTSSTWSSLLMAGAWSTQSYK	3	LYTSSTWSSLLMAGAWSTQSYK3	45718.3	40124.3	64874.5
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	LYTTMPVAK	LYTTMPVAK	2	LYTTMPVAK2	204591	214852	218063
P70645	P70645	BLMH_RAT	Blmh	Bleomycin hydrolase	1	LYTVDYLSNMVGGR	LYTVDYLSNMVGGR	2	LYTVDYLSNMVGGR2	18858.4	33005	22057.7
P70645	P70645	BLMH_RAT	Blmh	Bleomycin hydrolase	1	LYTVDYLSNMVGGR	LYTVDYLSNMVGGR	3	LYTVDYLSNMVGGR3	9988.17	19744.6	10369.3
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	LYTWVEWVK	LYTWVEWVK	2	LYTWVEWVK2	10765.7	8386	13246.5
Q5M821	Q5M821;A0A8I5ZKD9	PPM1H_RAT	Ppm1h	Protein phosphatase 1H	0	LYVANAGDSR	LYVANAGDSR	2	LYVANAGDSR2	1607.79	3688.77	
A0A0U1RRU5	A0A0U1RRU5	A0A0U1RRU5_RAT	Tab1	TGF-beta activated kinase 1/MAP3K7 binding protein 1	1	LYVANVGTNR	LYVANVGTNR	2	LYVANVGTNR2	20176.2	19417.6	16113.8
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	LYVAVAGDK	LYVAVAGDK	2	LYVAVAGDK2	51782.7	64805.2	59043.1
A0A0G2K2M3	A0A0G2K2M3	A0A0G2K2M3_RAT	Stat6	Signal transducer and activator of transcription	1	LYVDFPQHLR	LYVDFPQHLR	3	LYVDFPQHLR3		3365.25	4558.1
B5DFD1	B5DFD1	B5DFD1_RAT	Nudcd1	NudC domain-containing protein 1	1	LYVIGTGDR	LYVIGTGDR	2	LYVIGTGDR2	19069.6	14118.9	15918.6
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LYVLEATATDSGPPR	LYVLEATATDSGPPR	2	LYVLEATATDSGPPR2	122044	141554	113253
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	LYVLEATATDSGPPR	LYVLEATATDSGPPR	3	LYVLEATATDSGPPR3	15637.8	25470.3	16694.1
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	LYVLQGGLAQQEWR	LYVLQGGLAQQEWR	2	LYVLQGGLAQQEWR2	4235.89	6175.35	3204.16
P0C2X9	P0C2X9	AL4A1_RAT	Aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1	LYVPQSLWPQIK	LYVPQSLWPQIK	2	LYVPQSLWPQIK2	86805.3	81223.5	79241.2
P0C2X9	P0C2X9	AL4A1_RAT	Aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1	LYVPQSLWPQIK	LYVPQSLWPQIK	3	LYVPQSLWPQIK3	14235.7	18630.5	15660.1
P35433	P35433	PUR1_RAT	Ppat	Amidophosphoribosyltransferase	1	LYVSNLGIGHTR	LYVSNLGIGHTR	3	LYVSNLGIGHTR3	10497.5	9549.38	7172.27
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	LYVSSEK	LYVSSEK	2	LYVSSEK2	200898	230070	184995
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	LYVTSGR	LYVTSGR	2	LYVTSGR2	4.04795e+06	4.26791e+06	4.19924e+06
D3ZMI6	D3ZMI6	D3ZMI6_RAT	Olfm4	Olfactomedin 4	1	LYVYNDGYLLNYDLVFLQTPK	LYVYNDGYLLNYDLVFLQTPK	3	LYVYNDGYLLNYDLVFLQTPK3	8571.76	9122.92	18445
Q9R064	Q9R064	GORS2_RAT	Gorasp2	Golgi reassembly-stacking protein 2	1	LYVYNTDTDNCR	LYVYNTDTDNC(UniMod:4)R	2	LYVYNTDTDNC(UniMod:4)R2	54476	63112.3	49446.7
G3V928	A0A8I6G721;A0A0G2K0H3;G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	0	LYWADAK	LYWADAK	2	LYWADAK2	77386.6	97117.3	120092
G3V928	G3V928;A0A8I6AQY2	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	0	LYWCDAR	LYWC(UniMod:4)DAR	2	LYWC(UniMod:4)DAR2	87400.4	133243	106187
D3ZQC1	D3ZQC1	D3ZQC1_RAT	B3galt6	Hexosyltransferase	1	LYWGFFSGR	LYWGFFSGR	2	LYWGFFSGR2	16647.8	15523.6	9129.53
P98166	P98166	VLDLR_RAT	Vldlr	Very low-density lipoprotein receptor	1	LYWLDSK	LYWLDSK	2	LYWLDSK2	28041.9	29257.5	20748.1
A0A0G2K0H3	A0A8I6G721;A0A0G2K0H3	A0A0G2K0H3_RAT	Lrp6	Low-density lipoprotein receptor-related protein	0	LYWTDSETNR	LYWTDSETNR	2	LYWTDSETNR2		3752.72	3775.55
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	LYWVDAFYDR	LYWVDAFYDR	2	LYWVDAFYDR2	61390.3	77078.3	76939.4
P35952	A0A8I5ZTA7;P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	0	LYWVDSK	LYWVDSK	2	LYWVDSK2	167402	222696	170755
G3V9R2	Q5FVP9;G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	0	LYYEESR	LYYEESR	2	LYYEESR2	355708	296393	323157
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	LYYEGLQDK	LYYEGLQDK	2	LYYEGLQDK2	44475.5	35884.2	30758.5
Q64649	Q64649	KPB1_RAT	Phka1	Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform	1	LYYEPAELK	LYYEPAELK	2	LYYEPAELK2	7275.76	6801.81	10568.1
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	LYYFEVSEAAPR	LYYFEVSEAAPR	2	LYYFEVSEAAPR2	10421.5	15230.7	13959.6
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	LYYGEDEK	LYYGEDEK	2	LYYGEDEK2	225772	206705	226369
A0A0G2JTG3	A0A0G2JTG3	A0A0G2JTG3_RAT	Susd1	Sushi domain containing 1	1	LYYGEYYNAPLK	LYYGEYYNAPLK	2	LYYGEYYNAPLK2	17913.4		16476.3
A0A8I6GBE0	A0A8I6GBE0	A0A8I6GBE0_RAT	Dpp9	Dipeptidyl peptidase 9	1	LYYLGMPYGSR	LYYLGMPYGSR	2	LYYLGMPYGSR2	7050.65	7212.12	10598.8
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	LYYQQLK	LYYQQLK	2	LYYQQLK2	42918.6	52730.4	43683.9
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	LYYQSGEMQEFK	LYYQSGEMQEFK	2	LYYQSGEMQEFK2	545559	375971	368718
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	LYYSLPVLPGTVVR	LYYSLPVLPGTVVR	2	LYYSLPVLPGTVVR2	27313.6	16603.3	24724.2
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	LYYSLPVLPGTVVR	LYYSLPVLPGTVVR	3	LYYSLPVLPGTVVR3	2163.57	8438.49	5178.96
D4A8G9	D4A8G9	ZFY26_RAT	Zfyve26	Zinc finger FYVE domain-containing protein 26	1	MAAADVSR	MAAADVSR	2	MAAADVSR2	14465.1		14713
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	MAAAGGTVSGPSSACK	MAAAGGTVSGPSSAC(UniMod:4)K	2	MAAAGGTVSGPSSAC(UniMod:4)K2	1695.91	3162.9	4312.36
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	MAAAGGTVSGPSSACKPGR	MAAAGGTVSGPSSAC(UniMod:4)KPGR	3	MAAAGGTVSGPSSAC(UniMod:4)KPGR3	40358.3	65444.6	47064.1
D3ZAP9	D3ZAP9	D3ZAP9_RAT	Gpd1l1	Glycerol-3-phosphate dehydrogenase [NAD(+)]	1	MAAAPLK	MAAAPLK	1	MAAAPLK1	165931	140331	70752.5
Q6TMA8	Q6TMA8	ANGL4_RAT	Angptl4	Angiopoietin-related protein 4	1	MAACGNACQGPK	MAAC(UniMod:4)GNAC(UniMod:4)QGPK	2	MAAC(UniMod:4)GNAC(UniMod:4)QGPK2		1535.34	1401.68
Q6NX65	Q6NX65	PDC10_RAT	Pdcd10	Programmed cell death protein 10	1	MAADDVEEYMIERPEPEFQDLNEK	MAADDVEEYMIERPEPEFQDLNEK	3	MAADDVEEYMIERPEPEFQDLNEK3	164985	169739	186440
Q6NX65	Q6NX65	PDC10_RAT	Pdcd10	Programmed cell death protein 10	1	MAADDVEEYMIERPEPEFQDLNEK	MAADDVEEYMIERPEPEFQDLNEK	4	MAADDVEEYMIERPEPEFQDLNEK4	7415.54	7568.13	10761.5
A0A096MJT6	A0A096MJT6	A0A096MJT6_RAT	Bltp1	Similar to RIKEN cDNA D630029K19	1	MAAEAGVPAECQSGQK	MAAEAGVPAEC(UniMod:4)QSGQK	2	MAAEAGVPAEC(UniMod:4)QSGQK2	7088.93	2896.22	7212.85
B1WBT4	B1WBT4	B1WBT4_RAT	Srpk2	SRSF protein kinase 2	1	MAAEATEWQK	MAAEATEWQK	2	MAAEATEWQK2	31674	25402.5	37000.6
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	MAAEMAR	MAAEMAR	2	MAAEMAR2	70308.9	62486.7	83050.2
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	MAAETDPHK	MAAETDPHK	2	MAAETDPHK2			20551.9
P06760	P06760	BGLR_RAT	Gusb	Beta-glucuronidase	1	MAAFILR	MAAFILR	2	MAAFILR2	19014	16711.5	20299.7
Q920A6	Q920A6	RISC_RAT	Scpep1	Retinoid-inducible serine carboxypeptidase	1	MAAGISLELHK	MAAGISLELHK	3	MAAGISLELHK3	9665.5	8003.05	13712.7
Q642B0	Q642B0	Q642B0_RAT	Gpc4	Glypican 4	1	MAAGNENEDDCWNGK	MAAGNENEDDC(UniMod:4)WNGK	2	MAAGNENEDDC(UniMod:4)WNGK2	1962.76	713.751	4633.08
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	MAALEVYVR	MAALEVYVR	2	MAALEVYVR2	3222.74	3734.49	9423.09
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	MAALVYYGFR	MAALVYYGFR	2	MAALVYYGFR2	18805.6	17456	20989.6
Q62826	Q62826	HNRPM_RAT	Hnrnpm	Heterogeneous nuclear ribonucleoprotein M	1	MAAPIDR	MAAPIDR	2	MAAPIDR2	5993.23		
Q6TEK3	Q6TEK3;Q6TUH2	VKORL_RAT	Vkorc1l1	Vitamin K epoxide reductase complex subunit 1-like protein 1	0	MAAPVLLR	MAAPVLLR	2	MAAPVLLR2	83471.9	65665.8	73942.1
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	MAAQMVR	MAAQMVR	2	MAAQMVR2	19986.2	21495.3	31719
D3ZL11	D3ZL11	D3ZL11_RAT	Rbsn	Rabenosyn, RAB effector	1	MAASLNAGETTYSLEHANDLR	MAASLNAGETTYSLEHANDLR	3	MAASLNAGETTYSLEHANDLR3	7316.13		
D3ZTJ3	D3ZTJ3	D3ZTJ3_RAT	Adamts12	ADAM metallopeptidase with thrombospondin type 1 motif, 12	1	MAASSGQPCHLR	MAASSGQPC(UniMod:4)HLR	3	MAASSGQPC(UniMod:4)HLR3	10933.5	6729.19	
B4F7C2	B4F7C2	B4F7C2_RAT	Tubb4a	Tubulin beta chain	1	MAATFIGNSTAIQELFK	MAATFIGNSTAIQELFK	2	MAATFIGNSTAIQELFK2	6792.17		7708.46
Q498D5	Q498D5	RMD2_RAT	Rmdn2	Regulator of microtubule dynamics protein 2	1	MAATLFGEIPSSTVHEALHNFLK	MAATLFGEIPSSTVHEALHNFLK	4	MAATLFGEIPSSTVHEALHNFLK4		1515.91	5560.63
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	MAAVDHINAVLR	MAAVDHINAVLR	2	MAAVDHINAVLR2	6104.3	12697.4	5277.74
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	MAAVDHINAVLR	MAAVDHINAVLR	3	MAAVDHINAVLR3	69754.8	90270.6	105934
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	MACGLGGK	MAC(UniMod:4)GLGGK	1	MAC(UniMod:4)GLGGK1	4848.81	4250.22	3519.4
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	MACGLGGK	MAC(UniMod:4)GLGGK	2	MAC(UniMod:4)GLGGK2	354472	364426	347133
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	MACKPPDIPNGIYSPQR	MAC(UniMod:4)KPPDIPNGIYSPQR	3	MAC(UniMod:4)KPPDIPNGIYSPQR3	1.06869e+06	978873	858042
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	MACLSNVPIESLR	MAC(UniMod:4)LSNVPIESLR	2	MAC(UniMod:4)LSNVPIESLR2	13407	14326.6	14539.6
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	MADAIILAIAGGQELLAQTQK	MADAIILAIAGGQELLAQTQK	3	MADAIILAIAGGQELLAQTQK3		11290.8	7953.3
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	MADAWIQAIK	MADAWIQAIK	2	MADAWIQAIK2	1.0731e+06	868174	940611
Q6AYR2	A0A8I6ASR6;Q6AYR2	NDRG3_RAT	Ndrg3	Protein NDRG3	0	MADCGGLPQVVQPGK	MADC(UniMod:4)GGLPQVVQPGK	2	MADC(UniMod:4)GGLPQVVQPGK2	11857.3	12069.4	7341.06
Q80ZG6	Q80ZG6	BBC3_RAT	Bbc3	Bcl-2-binding component 3	1	MADDLNAQYER	MADDLNAQYER	2	MADDLNAQYER2	1104.2	2849.63	2491.13
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	MADEAASEAHQEGDTR	MADEAASEAHQEGDTR	2	MADEAASEAHQEGDTR2	1.54421e+06	1.44648e+06	1.32536e+06
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	MADEAASEAHQEGDTR	MADEAASEAHQEGDTR	3	MADEAASEAHQEGDTR3	3.20259e+07	3.01342e+07	2.84188e+07
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	MADEAASEAHQEGDTRTTK	MADEAASEAHQEGDTRTTK	3	MADEAASEAHQEGDTRTTK3	30143.8	54867.9	44921.6
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	MADEAASEAHQEGDTRTTK	MADEAASEAHQEGDTRTTK	4	MADEAASEAHQEGDTRTTK4	56278.8	89388.4	73003.4
P14882	P14882	PCCA_RAT	Pcca	Propionyl-CoA carboxylase alpha chain, mitochondrial	1	MADEAVCVGPAPTSK	MADEAVC(UniMod:4)VGPAPTSK	2	MADEAVC(UniMod:4)VGPAPTSK2	36601.9	25778.6	28865.8
Q02563	Q02563	SV2A_RAT	Sv2a	Synaptic vesicle glycoprotein 2A	1	MADGAPLAGVR	MADGAPLAGVR	2	MADGAPLAGVR2	47909.4	39078.6	42756.6
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	MADGVANVEHILK	MADGVANVEHILK	2	MADGVANVEHILK2	12712.9	10528.5	7617.5
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	MADGVANVEHILK	MADGVANVEHILK	3	MADGVANVEHILK3	82975.6	68978.9	92296
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	MADINFK	MADINFK	2	MADINFK2	12548.6		
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	MADLCFLVQHYDLAYSCYHTAK	MADLC(UniMod:4)FLVQHYDLAYSC(UniMod:4)YHTAK	4	MADLC(UniMod:4)FLVQHYDLAYSC(UniMod:4)YHTAK4	7762.36	11873.5	8900.25
P23711	P23711	HMOX2_RAT	Hmox2	Heme oxygenase 2	1	MADLSELLK	MADLSELLK	2	MADLSELLK2	38720.3	35717.5	33470.1
P12007	P12007	IVD_RAT	Ivd	Isovaleryl-CoA dehydrogenase, mitochondrial	1	MADMYTR	MADMYTR	2	MADMYTR2	62307	70391.5	81423.6
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	MADPQSIQESQNLSMFLANHNK	MADPQSIQESQNLSMFLANHNK	3	MADPQSIQESQNLSMFLANHNK3	98724.4	138519	110328
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	MADPQSIQESQNLSMFLANHNR	MADPQSIQESQNLSMFLANHNR	3	MADPQSIQESQNLSMFLANHNR3	6374.08	7338.36	4408.25
A0A8I6A1D9	A0A8I6A1D9	A0A8I6A1D9_RAT	Use1	Vesicle transport protein USE1	1	MADQNLEK	MADQNLEK	2	MADQNLEK2	24701.8		25035.3
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	MADRLEALIDPFDLDVFTPHLNSNLNR	MADRLEALIDPFDLDVFTPHLNSNLNR	4	MADRLEALIDPFDLDVFTPHLNSNLNR4		2058.55	3579.29
Q8VBU2	Q8VBU2	NDRG2_RAT	Ndrg2	Protein NDRG2	1	MADSGGQPQLTQPGK	MADSGGQPQLTQPGK	2	MADSGGQPQLTQPGK2	3187.75	6023.56	
O35152	O35152	BET1L_RAT	Bet1l	BET1-like protein	1	MADSLASK	MADSLASK	2	MADSLASK2	15735.4	15564.8	14220.6
Q5PQJ6	Q5PQJ6	P5CR3_RAT	Pycr3	Pyrroline-5-carboxylate reductase 3	1	MAEAIAQGLIR	MAEAIAQGLIR	2	MAEAIAQGLIR2	16343.5	16125.9	7289.21
P20673	P20673	ARLY_RAT	Asl	Argininosuccinate lyase	1	MAEDLILYGTK	MAEDLILYGTK	2	MAEDLILYGTK2	5273.5		1943.9
F7FQB8	F7FQB8	F7FQB8_RAT	Kpna4	Karyopherin subunit alpha 4	1	MAEDQAETIANLIEECGGLEK	MAEDQAETIANLIEEC(UniMod:4)GGLEK	3	MAEDQAETIANLIEEC(UniMod:4)GGLEK3	3786.15	9116.77	6497.67
Q5QE80	Q5QE80	AOXC_RAT	Aox3	Aldehyde oxidase 3	1	MAEDSPNTVLTFR	MAEDSPNTVLTFR	2	MAEDSPNTVLTFR2	6553	5286.1	7476.96
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	MAEELKPMDTDK	MAEELKPMDTDK	3	MAEELKPMDTDK3	4151.1		6076.42
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	MAEELKPMDTDKESIAESK	MAEELKPMDTDKESIAESK	3	MAEELKPMDTDKESIAESK3	4771.54		
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	MAEELKPMDTDKESIAESK	MAEELKPMDTDKESIAESK	4	MAEELKPMDTDKESIAESK4	23407.1	21223.6	19544.9
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	MAEGDELVVPETSDNSR	MAEGDELVVPETSDNSR	2	MAEGDELVVPETSDNSR2	34496.6	28941	31174.5
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	MAEGDELVVPETSDNSR	MAEGDELVVPETSDNSR	3	MAEGDELVVPETSDNSR3	7512.48	5899.05	3278.05
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	MAEGDELVVPETSDNSRK	MAEGDELVVPETSDNSRK	3	MAEGDELVVPETSDNSRK3	5041.38	5556.34	11606
Q5XID7	Q5XID7	ARMX3_RAT	Armcx3	Armadillo repeat-containing X-linked protein 3	1	MAEGGPGDVEDAGDCSGAR	MAEGGPGDVEDAGDC(UniMod:4)SGAR	2	MAEGGPGDVEDAGDC(UniMod:4)SGAR2	1294.13	755.64	1946.45
O35815	O35815	ATX3_RAT	Atxn3	Ataxin-3	1	MAEGGVTSEDYR	MAEGGVTSEDYR	2	MAEGGVTSEDYR2	9979.05	6104.34	9893.99
D4A6K4	D4A6K4	D4A6K4_RAT	Golga1	Golgin A1	1	MAEGLALALAR	MAEGLALALAR	2	MAEGLALALAR2	1754.67	2595.38	395.609
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	MAEGLPQQTLVGQR	MAEGLPQQTLVGQR	2	MAEGLPQQTLVGQR2	16301	13323.9	16875
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	MAEIGEHVAPSEAANSLEQAQAAAER	MAEIGEHVAPSEAANSLEQAQAAAER	3	MAEIGEHVAPSEAANSLEQAQAAAER3	11837.3	18471.5	22085.1
Q6QGW5	Q6QGW5	SRA1_RAT	Sra1	Steroid receptor RNA activator 1	1	MAELYVK	MAELYVK	1	MAELYVK1	643725		
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	MAEMRPPLIETSINQPK	MAEMRPPLIETSINQPK	2	MAEMRPPLIETSINQPK2	6953.32	5625.81	
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	MAEMRPPLIETSINQPK	MAEMRPPLIETSINQPK	3	MAEMRPPLIETSINQPK3	236935	299748	307663
A0A8I6AIH6	A0A8I6AIH6	A0A8I6AIH6_RAT	Suclg2	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial	1	MAENLGFLGSLK	MAENLGFLGSLK	2	MAENLGFLGSLK2	77769.7	51909.3	68999
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	MAEQHDLETDDDLLPEQEEVIR	MAEQHDLETDDDLLPEQEEVIR	3	MAEQHDLETDDDLLPEQEEVIR3	18637.5	18997.4	12357.9
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	MAEQLSQQER	MAEQLSQQER	2	MAEQLSQQER2	1.58774e+06	1.69905e+06	1.83874e+06
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	MAEQLSQQER	MAEQLSQQER	3	MAEQLSQQER3	8355.58	19138.2	18379.7
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	MAEQLSQQERK	MAEQLSQQERK	3	MAEQLSQQERK3	6348.77	7561.82	
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	MAESGPDEAPAGEAAAR	MAESGPDEAPAGEAAAR	2	MAESGPDEAPAGEAAAR2	115404	121198	111516
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	MAESGPDEAPAGEAAAR	MAESGPDEAPAGEAAAR	3	MAESGPDEAPAGEAAAR3	12427.3	17185.4	18565.5
Q66HF2	Q66HF2	TM9S1_RAT	Tm9sf1	Transmembrane 9 superfamily member 1	1	MAESLYEIR	MAESLYEIR	2	MAESLYEIR2	14625.2	9358.28	11589.9
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	MAESMLAILCHILR	MAESMLAILC(UniMod:4)HILR	3	MAESMLAILC(UniMod:4)HILR3	4132.75	3774.2	3438.71
P27590	P27590	UROM_RAT	Umod	Uromodulin	1	MAETCVPVLR	MAETC(UniMod:4)VPVLR	2	MAETC(UniMod:4)VPVLR2	8037.79	9280.71	5389.98
P51146	P51146	RAB4B_RAT	Rab4b	Ras-related protein Rab-4B	1	MAETYDFLFK	MAETYDFLFK	2	MAETYDFLFK2	5967.18	9309.86	8464.13
A0A8I6AIW6	A0A8I6AIW6	A0A8I6AIW6_RAT	Tmem222	Transmembrane protein 222	1	MAEVETPTAAETDMK	MAEVETPTAAETDMK	2	MAEVETPTAAETDMK2	3601.39		6660.33
F1M8Y4	F1M8Y4	F1M8Y4_RAT	Deptor	DEP domain containing MTOR-interacting protein	1	MAEVLVTGEQLR	MAEVLVTGEQLR	2	MAEVLVTGEQLR2	2740.61	3687.91	5734.68
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	MAEWIQQNNILSIVLR	MAEWIQQNNILSIVLR	3	MAEWIQQNNILSIVLR3	7760.14	8842.24	6140.92
Q62931	Q62931	GOSR1_RAT	Gosr1	Golgi SNAP receptor complex member 1	1	MAEYTHSAGVPSLNAALMHTLQR	MAEYTHSAGVPSLNAALMHTLQR	3	MAEYTHSAGVPSLNAALMHTLQR3	3078.63		3293.9
Q62931	Q62931	GOSR1_RAT	Gosr1	Golgi SNAP receptor complex member 1	1	MAEYTHSAGVPSLNAALMHTLQR	MAEYTHSAGVPSLNAALMHTLQR	4	MAEYTHSAGVPSLNAALMHTLQR4	24004.3	22417.6	24484.6
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	MAFDYYPFHR	MAFDYYPFHR	2	MAFDYYPFHR2	3284.51		
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	MAFDYYPFHR	MAFDYYPFHR	3	MAFDYYPFHR3	31326.5	26426.9	29725.3
A0A8I5ZYN9	A0A8I5ZYN9	A0A8I5ZYN9_RAT	Ipo11-ps1	Similar to importin 11	1	MAFFTYPTLTEICR	MAFFTYPTLTEIC(UniMod:4)R	2	MAFFTYPTLTEIC(UniMod:4)R2	7778.06	4070.9	3205.19
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	MAFLDAAGCLMPPAYEPWTEHNVPEEKDEK	MAFLDAAGC(UniMod:4)LMPPAYEPWTEHNVPEEKDEK	4	MAFLDAAGC(UniMod:4)LMPPAYEPWTEHNVPEEKDEK4	6897.35	11983.7	10004.9
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	MAFMAATDHSDQLR	MAFMAATDHSDQLR	3	MAFMAATDHSDQLR3	10945.9		9485.02
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	MAFPCFDEPALK	MAFPC(UniMod:4)FDEPALK	2	MAFPC(UniMod:4)FDEPALK2	53788.8	41102.3	51315.8
F1M8B7	F1M8B7	F1M8B7_RAT	Chmp2b	Charged multivesicular body protein 2B	1	MAGAMSTTAK	MAGAMSTTAK	2	MAGAMSTTAK2	22131.4	21159.8	14010.8
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	MAGDPVANVR	MAGDPVANVR	2	MAGDPVANVR2	1.16724e+06	1.1346e+06	1.14893e+06
Q4QQT4	Q4QQT4	2AAB_RAT	Ppp2r1b	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	1	MAGDQVANVR	MAGDQVANVR	2	MAGDQVANVR2	11593.9	12821.9	7704.86
Q63690	A0A8I6GCB5;Q63690	BAX_RAT	Bax	Apoptosis regulator BAX	0	MAGETPELTLEQPPQDASTK	MAGETPELTLEQPPQDASTK	3	MAGETPELTLEQPPQDASTK3	17694.2	17009	13123
Q63690	A0A8I6GCB5;Q63690	BAX_RAT	Bax	Apoptosis regulator BAX	0	MAGETPELTLEQPPQDASTKK	MAGETPELTLEQPPQDASTKK	3	MAGETPELTLEQPPQDASTKK3	8532.88	11683.9	17392.6
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	MAGLQALEDIIK	MAGLQALEDIIK	2	MAGLQALEDIIK2	10664.1	7403.2	4760.03
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	MAGLQALEDIIKK	MAGLQALEDIIKK	3	MAGLQALEDIIKK3	10041	13789	12038.2
P13264	P13264	GLSK_RAT	Gls	Glutaminase kidney isoform, mitochondrial	1	MAGNEYVGFSNATFQSER	MAGNEYVGFSNATFQSER	3	MAGNEYVGFSNATFQSER3		2747.86	
P50398	P50398	GDIA_RAT	Gdi1	Rab GDP dissociation inhibitor alpha	1	MAGSAFDFENMK	MAGSAFDFENMK	2	MAGSAFDFENMK2	57901.9	44109.9	38629.5
P50398	P50398	GDIA_RAT	Gdi1	Rab GDP dissociation inhibitor alpha	1	MAGSAFDFENMKR	MAGSAFDFENMKR	3	MAGSAFDFENMKR3	18796.9	25509.3	20125.1
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	MAGTEQSLNSASER	MAGTEQSLNSASER	2	MAGTEQSLNSASER2	9436.29	3802.99	9593.37
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	MAGTMETSEMVNGAAEQR	MAGTMETSEMVNGAAEQR	2	MAGTMETSEMVNGAAEQR2	244379	262358	247062
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	MAGTMETSEMVNGAAEQR	MAGTMETSEMVNGAAEQR	3	MAGTMETSEMVNGAAEQR3	12235.4	12794.5	19615.1
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	MAGVMAQCGGLQCMLNR	MAGVMAQC(UniMod:4)GGLQC(UniMod:4)MLNR	2	MAGVMAQC(UniMod:4)GGLQC(UniMod:4)MLNR2	23226.3	14207.6	21166.2
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	MAGVMAQCGGLQCMLNR	MAGVMAQC(UniMod:4)GGLQC(UniMod:4)MLNR	3	MAGVMAQC(UniMod:4)GGLQC(UniMod:4)MLNR3	15273.1	15953.7	9959.79
A0A0G2K6C7	A0A0G2K6C7	A0A0G2K6C7_RAT	Trim5	Tripartite motif-containing 5	1	MAICWLCER	MAIC(UniMod:4)WLC(UniMod:4)ER	2	MAIC(UniMod:4)WLC(UniMod:4)ER2	46204.3	42302.7	41793.1
P14270	P14270	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	1	MAIDIVLATDMSK	MAIDIVLATDMSK	2	MAIDIVLATDMSK2	4936.29	6390.51	10082.1
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	MAIEAAGFK	MAIEAAGFK	2	MAIEAAGFK2	464445	416515	390636
A0A8I5ZM67	A0A8I5ZM67	A0A8I5ZM67_RAT	Borcs7	BLOC-1-related complex subunit 7	1	MAIITTHLQYQQEAIQK	MAIITTHLQYQQEAIQK	3	MAIITTHLQYQQEAIQK3	6937.41	8376.11	11028.9
Q01827	Q01827	VMAT2_RAT	Slc18a2	Synaptic vesicular amine transporter	1	MAILMDHNCPIK	MAILMDHNC(UniMod:4)PIK	2	MAILMDHNC(UniMod:4)PIK2	9888.21	4666.52	4525.89
Q01827	Q01827	VMAT2_RAT	Slc18a2	Synaptic vesicular amine transporter	1	MAILMDHNCPIK	MAILMDHNC(UniMod:4)PIK	3	MAILMDHNC(UniMod:4)PIK3	137911	138505	147604
Q6QI44	Q6QI44	NAA25_RAT	Naa25	N-alpha-acetyltransferase 25, NatB auxiliary subunit	1	MAIQQADK	MAIQQADK	2	MAIQQADK2	8931.77	4004.71	4185.4
Q75Q40	Q75Q40	TOM40_RAT	Tomm40	Mitochondrial import receptor subunit TOM40 homolog	1	MAIQTQQSK	MAIQTQQSK	2	MAIQTQQSK2	84198.3	102471	88760.6
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	MAISAVAGILK	MAISAVAGILK	2	MAISAVAGILK2	21928	25815.3	26953.2
Q6AXR1	Q6AXR1	Q6AXR1_RAT	Tbc1d20	TBC1 domain family, member 20	1	MAISEGGLLTDEIR	MAISEGGLLTDEIR	2	MAISEGGLLTDEIR2	1439.43	3967.99	1917.52
Q64573	Q64573	EST1F_RAT	Ces1f	Liver carboxylesterase 1F	1	MAITLLEK	MAITLLEK	2	MAITLLEK2	8347.72	6456.64	3889.27
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	MAKPEEVLVVENDQGEVVR	MAKPEEVLVVENDQGEVVR	3	MAKPEEVLVVENDQGEVVR3	2862.26	5422.7	3231.44
F7EM42	F7EM42	F7EM42_RAT	Sash3	SAM and SH3 domain containing 3	1	MALAFSEPEER	MALAFSEPEER	2	MALAFSEPEER2	41510.9	37665.8	31282
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	MALDDMVSTLK	MALDDMVSTLK	2	MALDDMVSTLK2	139868	134222	111841
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	MALDDMVSTLKK	MALDDMVSTLKK	2	MALDDMVSTLKK2	14275.2	17421.5	12370.2
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	MALDDMVSTLKK	MALDDMVSTLKK	3	MALDDMVSTLKK3	73428.3	82656.5	66266.4
Q9Z118	Q9Z118	PTBP3_RAT	Ptbp3	Polypyrimidine tract-binding protein 3	1	MALDGQNIYNACCTLR	MALDGQNIYNAC(UniMod:4)C(UniMod:4)TLR	2	MALDGQNIYNAC(UniMod:4)C(UniMod:4)TLR2	7026.43		
Q9Z118	Q9Z118	PTBP3_RAT	Ptbp3	Polypyrimidine tract-binding protein 3	1	MALDGQNIYNACCTLR	MALDGQNIYNAC(UniMod:4)C(UniMod:4)TLR	3	MALDGQNIYNAC(UniMod:4)C(UniMod:4)TLR3	2742.61	3828.61	3599.44
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	MALDNLLANLPQAK	MALDNLLANLPQAK	2	MALDNLLANLPQAK2	40404.9	31094.6	31956.3
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	MALDNLLANLPQAK	MALDNLLANLPQAK	3	MALDNLLANLPQAK3	7532.07	14459.9	16251
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	MALDNLLANLPQAKPGK	MALDNLLANLPQAKPGK	3	MALDNLLANLPQAKPGK3	23110.6	24062.4	24409.4
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	MALELLTQEFGIPVER	MALELLTQEFGIPVER	2	MALELLTQEFGIPVER2	6568.95		2988.9
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	MALEMVFLAR	MALEMVFLAR	2	MALEMVFLAR2	11021.6	12096.8	5622.27
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	MALEVYK	MALEVYK	1	MALEVYK1	764502	835693	743903
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	MALEVYK	MALEVYK	2	MALEVYK2	3.79773e+07	4.44448e+07	4.34433e+07
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	MALEVYKLTLEIKQLQLQIDK	MALEVYKLTLEIKQLQLQIDK	4	MALEVYKLTLEIKQLQLQIDK4	7264.29	8804.44	3354.71
G3V6N2	G3V6N2	G3V6N2_RAT	Tmed4	Transmembrane p24 trafficking protein 4	1	MALFAGGK	MALFAGGK	2	MALFAGGK2	124492	119651	125780
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	MALGNGLR	MALGNGLR	2	MALGNGLR2	31433.1	22508.3	25579.9
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	MALLATVLGR	MALLATVLGR	2	MALLATVLGR2	34783.5	30415	39139.3
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	MALLHVDEYLFR	MALLHVDEYLFR	3	MALLHVDEYLFR3	3204.64	5538.06	3446.16
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	MALLMAEMSR	MALLMAEMSR	2	MALLMAEMSR2	1.20938e+06	1.00306e+06	1.09432e+06
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	MALLNIFAPK	MALLNIFAPK	2	MALLNIFAPK2	8445.06	10757.5	10793.4
Q6P6G4	Q6P6G4	Q6P6G4_RAT	Bpgm	Phosphoglycerate mutase	1	MALNHGEEQVR	MALNHGEEQVR	3	MALNHGEEQVR3	2925.53	5316.18	2078.55
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	MALNSPQPGPAEMELGR	MALNSPQPGPAEMELGR	2	MALNSPQPGPAEMELGR2	87358.1	81074.9	91035.2
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	MALNSPQPGPAEMELGR	MALNSPQPGPAEMELGR	3	MALNSPQPGPAEMELGR3	41098.9	43769.7	38084.9
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	MALNYQSK	MALNYQSK	2	MALNYQSK2	95986.6	99224.9	104594
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	MALPMPTK	MALPMPTK	2	MALPMPTK2	28318.9	25100.6	26079.2
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	MALSECR	MALSEC(UniMod:4)R	2	MALSEC(UniMod:4)R2	21132.3	24228.6	31209
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	MALSFVQR	MALSFVQR	2	MALSFVQR2	109031	121328	132693
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	MALSVLLK	MALSVLLK	2	MALSVLLK2	17449.8	23149.7	14021.4
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	MALVGLGVSHSILK	MALVGLGVSHSILK	2	MALVGLGVSHSILK2	33868.6	34478.9	31006.5
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	MALVGLGVSHSILK	MALVGLGVSHSILK	3	MALVGLGVSHSILK3	190579	149970	186854
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	MALVLEALPQIAAK	MALVLEALPQIAAK	2	MALVLEALPQIAAK2	17998.9	20823.3	15923.7
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	MALVLEALPQIAAK	MALVLEALPQIAAK	3	MALVLEALPQIAAK3	6481.66	7533.15	4747.64
A0A0G2K528	A0A0G2K528	A0A0G2K528_RAT	Stx16	Syntaxin 16	1	MALVSGISLDPEAAIGVTK	MALVSGISLDPEAAIGVTK	2	MALVSGISLDPEAAIGVTK2	5529.8	4830.59	6846.17
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	MAMGVSALTHSPSSSSISSVSSVASSVGGR	MAMGVSALTHSPSSSSISSVSSVASSVGGR	3	MAMGVSALTHSPSSSSISSVSSVASSVGGR3	4496.41	3200.26	153.153
P35053	P35053	GPC1_RAT	Gpc1	Glypican-1	1	MAMSPASDDR	MAMSPASDDR	2	MAMSPASDDR2	69905.2	58931.8	54331.8
A0A8I5Y652	A0A8I5Y652	A0A8I5Y652_RAT	Tacc3	Transforming, acidic coiled-coil containing protein 3	1	MANEEIAQVR	MANEEIAQVR	2	MANEEIAQVR2	7022.76	9287.27	10232.3
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	MANGVTDLR	MANGVTDLR	2	MANGVTDLR2	13753.9		
Q6AY55	Q6AY55	DCAKD_RAT	Dcakd	Dephospho-CoA kinase domain-containing protein	1	MANHVLDNSGEWSLTR	MANHVLDNSGEWSLTR	3	MANHVLDNSGEWSLTR3	3036.36	7206.69	4573.75
G3V6N7	G3V6N7	G3V6N7_RAT	Slc12a6	Solute carrier family 12, member 6	1	MANYTNLTQGAK	MANYTNLTQGAK	2	MANYTNLTQGAK2	12130.3	18312.6	8724.1
D3ZMQ3	D3ZMQ3	D3ZMQ3_RAT	Itga4	Integrin subunit alpha 4	1	MAPCYQDFVR	MAPC(UniMod:4)YQDFVR	2	MAPC(UniMod:4)YQDFVR2	20778.9	14644.9	14459
Q5M887	Q5M887	TPC13_RAT	Trappc13	Trafficking protein particle complex subunit 13	1	MAPGYGDVR	MAPGYGDVR	2	MAPGYGDVR2	107577	98231.7	92407.7
A0A8I6ACY9	A0A8I6ACY9	A0A8I6ACY9_RAT	Vps37b	VPS37B subunit of ESCRT-I	1	MAPHQPGFILQ	MAPHQPGFILQ	2	MAPHQPGFILQ2	9755.32	3010.45	4811.4
Q9JI92	Q9JI92	SDCB1_RAT	Sdcbp	Syntenin-1	1	MAPSIMK	MAPSIMK	2	MAPSIMK2	577851	465585	526408
B5DF51	B5DF51	EMC5_RAT	Mmgt1	ER membrane protein complex subunit 5	1	MAPSLWK	MAPSLWK	2	MAPSLWK2	24660.2	36171.6	30213
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	MAPSTCASTGSLQWNK	MAPSTC(UniMod:4)ASTGSLQWNK	2	MAPSTC(UniMod:4)ASTGSLQWNK2	17870.1	21468.2	24360.6
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	MAPSTCASTGSLQWNK	MAPSTC(UniMod:4)ASTGSLQWNK	3	MAPSTC(UniMod:4)ASTGSLQWNK3	2966.32		
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	MAPSVEK	MAPSVEK	2	MAPSVEK2	577816	586496	557948
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	MAPSVEKK	MAPSVEKK	2	MAPSVEKK2			12438.3
Q07266	Q07266	DREB_RAT	Dbn1	Drebrin	1	MAPTPIPTR	MAPTPIPTR	2	MAPTPIPTR2	13363.8	14084.6	6395.33
Q4QQV2	Q4QQV2	DOK1_RAT	Dok1	Docking protein 1	1	MAPTPVPQEPLGSPPALYAEPLDSLR	MAPTPVPQEPLGSPPALYAEPLDSLR	3	MAPTPVPQEPLGSPPALYAEPLDSLR3	42556	42874.8	42435.7
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	MAPVGVEK	MAPVGVEK	2	MAPVGVEK2	53846.3	75543.4	68451.3
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	MAPVVLTCHSTGSPAPAVSWSK	MAPVVLTC(UniMod:4)HSTGSPAPAVSWSK	3	MAPVVLTC(UniMod:4)HSTGSPAPAVSWSK3	7026.43	4745.48	3826.31
P0C1S9	P0C1S9	DGLB_RAT	Daglb	Diacylglycerol lipase-beta	1	MAPYPPCIPEHLDSNSSNHLLTGLR	MAPYPPC(UniMod:4)IPEHLDSNSSNHLLTGLR	4	MAPYPPC(UniMod:4)IPEHLDSNSSNHLLTGLR4	19891.5	25466.9	11894.5
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	MAPYQGPDAAPGALDYK	MAPYQGPDAAPGALDYK	2	MAPYQGPDAAPGALDYK2	1.18287e+06	1.24758e+06	1.24375e+06
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	MAPYQGPDAAPGALDYK	MAPYQGPDAAPGALDYK	3	MAPYQGPDAAPGALDYK3	193803	220921	223963
D3ZCD0	D3ZCD0	D3ZCD0_RAT	Tek	receptor protein-tyrosine kinase	1	MAQAFQNVR	MAQAFQNVR	2	MAQAFQNVR2	17064.1	15860.6	16788
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	MAQASAVLK	MAQASAVLK	2	MAQASAVLK2	4794.5	6511.12	8629.55
D4A3X7	D4A3X7	D4A3X7_RAT	Snx33	Sorting nexin	1	MAQEEADGIR	MAQEEADGIR	2	MAQEEADGIR2	6251.86	3675.82	7189.24
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	MAQELYMK	MAQELYMK	2	MAQELYMK2	149808	174005	164140
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	MAQEVLTHLK	MAQEVLTHLK	2	MAQEVLTHLK2	3958.36	3468.95	3177.68
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	MAQEVLTHLK	MAQEVLTHLK	3	MAQEVLTHLK3	27282.2	21788.3	18741
P0C8E4	P0C8E4	M3K7_RAT	Map3k7	Mitogen-activated protein kinase kinase kinase 7	1	MAQEYMK	MAQEYMK	2	MAQEYMK2	17875.5	26269.8	22389.4
Q68FR6	Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	1	MAQFDAK	MAQFDAK	1	MAQFDAK1	27517.7	17523.6	25100.7
Q68FR6	Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	1	MAQFDAK	MAQFDAK	2	MAQFDAK2	1.99532e+06	2.20838e+06	2.33053e+06
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	MAQFSEEGPSELSK	MAQFSEEGPSELSK	2	MAQFSEEGPSELSK2	24504.9	24198.5	24238.4
A0A8I5ZR58	A0A8I5ZR58	A0A8I5ZR58_RAT	Cux1-ps1	Protein CASP	1	MAQHTIQALQSELDSLR	MAQHTIQALQSELDSLR	3	MAQHTIQALQSELDSLR3		5619.82	13251
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	MAQLLDLSVDESEAFLSNLVVNK	MAQLLDLSVDESEAFLSNLVVNK	3	MAQLLDLSVDESEAFLSNLVVNK3	7566.32		
A0A8I6A5W7	A0A8I6A5W7	A0A8I6A5W7_RAT	Ccdc88a	Coiled coil domain containing 88A	1	MAQLQLENK	MAQLQLENK	2	MAQLQLENK2	1138	3708.16	
Q6P503	Q6P503	Q6P503_RAT	Atp6v1d	V-type proton ATPase subunit D	1	MAQTIMK	MAQTIMK	2	MAQTIMK2	26331.3	19367.5	28453.4
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	MAQVEVK	MAQVEVK	2	MAQVEVK2	171939	190662	186812
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	MAQVVGEASFIAR	MAQVVGEASFIAR	2	MAQVVGEASFIAR2	11782.2	10774	10789.6
Q5FVF4	Q5FVF4	TM7S3_RAT	Tm7sf3	Transmembrane 7 superfamily member 3	1	MAQVVQVMASAVK	MAQVVQVMASAVK	2	MAQVVQVMASAVK2	11151.5	20590.2	21671.8
D4AEK9	D4AEK9	D4AEK9_RAT	Ccdc6	Coiled-coil domain containing 6	1	MAQYLEEER	MAQYLEEER	2	MAQYLEEER2	52523.7	58233.5	55294.6
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	MAQYSFDK	MAQYSFDK	2	MAQYSFDK2	15308.9	13117.3	12410.1
Q6AYK6	Q6AYK6	CYBP_RAT	Cacybp	Calcyclin-binding protein	1	MASALEELQKDLEEVK	MASALEELQKDLEEVK	3	MASALEELQKDLEEVK3	9088.42		10402.4
D3ZYL0	D3ZYL0	D3ZYL0_RAT	Ripk1	Receptor interacting serine/threonine kinase 1	1	MASDDLLER	MASDDLLER	2	MASDDLLER2	10439.8		4408.16
Q810F4	Q810F4	FAM3C_RAT	Fam3c	Protein FAM3C	1	MASGAANVVGPK	MASGAANVVGPK	2	MASGAANVVGPK2	62027.4	60223	54688
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	MASGLEPK	MASGLEPK	2	MASGLEPK2	476420	418316	504561
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	MASGSWRPFVTVAPLGSPLR	MASGSWRPFVTVAPLGSPLR	3	MASGSWRPFVTVAPLGSPLR3	6363.93	4499.59	9958.42
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	MASICHTLMVQHR	MASIC(UniMod:4)HTLMVQHR	4	MASIC(UniMod:4)HTLMVQHR4	8376.09	6569.59	6742.05
A0A0G2JTX7	A0A0G2JTX7	A0A0G2JTX7_RAT	Col6a5	Collagen type VI alpha 5 chain	1	MASLTSEHENHSR	MASLTSEHENHSR	3	MASLTSEHENHSR3	17340.9	40523.8	
A0A8I5ZVX1	A0A8I5ZVX1	A0A8I5ZVX1_RAT	Ppfibp2	PPFIA binding protein 2	1	MASPAYTPLTTTAK	MASPAYTPLTTTAK	2	MASPAYTPLTTTAK2	11764.6	12731.5	12505.3
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	MASSFLK	MASSFLK	2	MASSFLK2	274503	320669	264018
Q62991	Q62991	SCFD1_RAT	Scfd1	Sec1 family domain-containing protein 1	1	MASTPASYGNTTTKPMGLLSR	MASTPASYGNTTTKPMGLLSR	3	MASTPASYGNTTTKPMGLLSR3	51316.1	47094.2	50776.9
F1M386	F1M386	RPGF2_RAT	Rapgef2	Rap guanine nucleotide exchange factor 2	1	MASVNMDPALMFR	MASVNMDPALMFR	2	MASVNMDPALMFR2	8352.28	6408.96	10608.1
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	MASVTGK	MASVTGK	1	MASVTGK1	6713.47	5662.69	
P62755	A0A8I6A7W5;P62755	RS6_RAT	Rps6	Small ribosomal subunit protein eS6	0	MATEVAADALGEEWK	MATEVAADALGEEWK	2	MATEVAADALGEEWK2	25656	32736.6	19664.4
P62755	A0A8I6A7W5;P62755	RS6_RAT	Rps6	Small ribosomal subunit protein eS6	0	MATEVAADALGEEWK	MATEVAADALGEEWK	3	MATEVAADALGEEWK3	9403.17	6654.08	14880.2
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	MATFGSAGSINYPDKK	MATFGSAGSINYPDKK	3	MATFGSAGSINYPDKK3	21419.5	13223.9	16301.3
A0A8I6A3R6	A0A8I6A3R6	A0A8I6A3R6_RAT	Arl9	ADP-ribosylation factor like GTPase 9	1	MATGIER	MATGIER	2	MATGIER2	10034.8	5136.78	
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	MATGQIAGVDK	MATGQIAGVDK	2	MATGQIAGVDK2	14026.7	5584.68	7631.41
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	MATHTLITGLEEYVR	MATHTLITGLEEYVR	2	MATHTLITGLEEYVR2		15372.7	13869.5
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	MATHTLITGLEEYVR	MATHTLITGLEEYVR	3	MATHTLITGLEEYVR3	36308.3	38487.9	34511.2
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	MATNAAAQNAIK	MATNAAAQNAIK	2	MATNAAAQNAIK2	1.75072e+06	1.66423e+06	1.78615e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	MATNAAAQNAIK	MATNAAAQNAIK	3	MATNAAAQNAIK3	10659.5	8481.81	18108.2
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	MATNAAAQNAIKK	MATNAAAQNAIKK	2	MATNAAAQNAIKK2	30014	22252.7	27564
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	MATNAAAQNAIKK	MATNAAAQNAIKK	3	MATNAAAQNAIKK3	558789	574308	633841
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	MATQASTLYSNNITK	MATQASTLYSNNITK	2	MATQASTLYSNNITK2	61473.7	62718.7	61420.8
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	MATQASTLYSNNITK	MATQASTLYSNNITK	3	MATQASTLYSNNITK3	3653.79	5233.33	7190.14
Q5RJQ0	Q5RJQ0	CHST1_RAT	Chst1	Carbohydrate sulfotransferase 1	1	MATSEEELKNPAISLVEER	MATSEEELKNPAISLVEER	3	MATSEEELKNPAISLVEER3	25496.3	32944.2	21638.8
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	MATTTIQSK	MATTTIQSK	2	MATTTIQSK2	62788.8	60602.5	54834.7
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	MATVWDEAEQDGIGEEVLK	MATVWDEAEQDGIGEEVLK	3	MATVWDEAEQDGIGEEVLK3	14074.7	14291.3	11450.9
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	MATVYPEPQNK	MATVYPEPQNK	2	MATVYPEPQNK2	55887.9	69165.8	69172.6
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	MAVEGVLK	MAVEGVLK	2	MAVEGVLK2	16709.3	21049.4	12035.5
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	MAVFGFEMSEDTGPDGTLLPK	MAVFGFEMSEDTGPDGTLLPK	3	MAVFGFEMSEDTGPDGTLLPK3	3583.65	3310.67	3491.93
A0A8I5ZU41	A0A8I5YBI0;A0A8I6AIH1;P00689;A0A8I5ZU41	A0A8I5ZU41_RAT	Amy1	Alpha-amylase	0	MAVGFMLAHPYGFTR	MAVGFMLAHPYGFTR	3	MAVGFMLAHPYGFTR3	4394.6	1398.25	3206.11
Q66HD3	Q66HD3	NASP_RAT	Nasp	Nuclear autoantigenic sperm protein	1	MAVLLEQMK	MAVLLEQMK	2	MAVLLEQMK2	7103.71	9481.04	
Q3MIE7	Q3MIE7	Q3MIE7_RAT	Commd9	COMM domain containing 9	1	MAVPTCLLQMK	MAVPTC(UniMod:4)LLQMK	2	MAVPTC(UniMod:4)LLQMK2	13949.5	8971.11	14892
D4A0G0	D4A0G0	D4A0G0_RAT	Osbpl7	Oxysterol-binding protein	1	MAVSEAPDGQR	MAVSEAPDGQR	2	MAVSEAPDGQR2	7506.4	7540.53	9418.29
P69897	P69897	TBB5_RAT	Tubb5	Tubulin beta-5 chain	1	MAVTFIGNSTAIQELFK	MAVTFIGNSTAIQELFK	2	MAVTFIGNSTAIQELFK2	223033	240698	196591
P69897	P69897	TBB5_RAT	Tubb5	Tubulin beta-5 chain	1	MAVTFIGNSTAIQELFK	MAVTFIGNSTAIQELFK	3	MAVTFIGNSTAIQELFK3	67087.7	58062.3	54080.7
P69897	P69897	TBB5_RAT	Tubb5	Tubulin beta-5 chain	1	MAVTFIGNSTAIQELFKR	MAVTFIGNSTAIQELFKR	3	MAVTFIGNSTAIQELFKR3	121012	106465	145982
A0A8I6GK63	A0A8I6GK63	A0A8I6GK63_RAT	Smc4	Structural maintenance of chromosomes protein	1	MAVWAQK	MAVWAQK	2	MAVWAQK2	3423.03		3796.73
A0A8I5ZNL8	A0A8I5ZNL8	A0A8I5ZNL8_RAT	ENSRNOG00000067025	Ig-like domain-containing protein	1	MAWYQQKPGEVPQLLIYYASTLQSGTPSR	MAWYQQKPGEVPQLLIYYASTLQSGTPSR	4	MAWYQQKPGEVPQLLIYYASTLQSGTPSR4	5037.7		2605.15
Q5PQX1	Q5PQX1	TOIP1_RAT	Tor1aip1	Torsin-1A-interacting protein 1	1	MAYNNIQK	MAYNNIQK	2	MAYNNIQK2	13840.4	14106.2	7530.79
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	MCALEFFK	MC(UniMod:4)ALEFFK	2	MC(UniMod:4)ALEFFK2	112079	111969	113582
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	MCALEFFKK	MC(UniMod:4)ALEFFKK	3	MC(UniMod:4)ALEFFKK3	4270.17		5836.78
P37727	P37727	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	1	MCAVFGGIYCLR	MC(UniMod:4)AVFGGIYC(UniMod:4)LR	2	MC(UniMod:4)AVFGGIYC(UniMod:4)LR2	14424.8	8734.68	16500.5
M0R7E7	M0R7E7;Q925D6	M0R7E7_RAT	Map2k3	Mitogen activated protein kinase kinase 3	0	MCDFGISGYLVDSVAK	MC(UniMod:4)DFGISGYLVDSVAK	2	MC(UniMod:4)DFGISGYLVDSVAK2	18275.7	17158.9	20324
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	MCDIGDASR	MC(UniMod:4)DIGDASR	2	MC(UniMod:4)DIGDASR2	5718.6	9478.33	10131.9
D4AEP0	D4AEP0	D4AEP0_RAT	Adss	Adenylosuccinate synthetase isozyme 2	1	MCDLVSDFDGFSER	MC(UniMod:4)DLVSDFDGFSER	2	MC(UniMod:4)DLVSDFDGFSER2	23228.4	14472.9	20032.2
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	MCDPDASGTFR	MC(UniMod:4)DPDASGTFR	2	MC(UniMod:4)DPDASGTFR2	10613.6	6205.25	10230.8
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	MCDVMAAYFGK	MC(UniMod:4)DVMAAYFGK	2	MC(UniMod:4)DVMAAYFGK2	5826.09	3206.43	12721.2
P00787	P00787	CATB_RAT	Ctsb	Cathepsin B	1	MCEAGYSTSYK	MC(UniMod:4)EAGYSTSYK	2	MC(UniMod:4)EAGYSTSYK2	22112.1	24720.9	24238.5
P00787	P00787	CATB_RAT	Ctsb	Cathepsin B	1	MCEAGYSTSYKEDK	MC(UniMod:4)EAGYSTSYKEDK	2	MC(UniMod:4)EAGYSTSYKEDK2	2240.35	4767.18	
P00787	P00787	CATB_RAT	Ctsb	Cathepsin B	1	MCEAGYSTSYKEDK	MC(UniMod:4)EAGYSTSYKEDK	3	MC(UniMod:4)EAGYSTSYKEDK3	34996.9	27305.3	13638.3
P18645	P18645	GALE_RAT	Gale	UDP-glucose 4-epimerase	1	MCEDLWR	MC(UniMod:4)EDLWR	2	MC(UniMod:4)EDLWR2	12051.6	14345	9282.37
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	MCEIVFEDPK	MC(UniMod:4)EIVFEDPK	2	MC(UniMod:4)EIVFEDPK2	12787	9190.46	15718.7
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	MCEIVFEDPKTPGEK	MC(UniMod:4)EIVFEDPKTPGEK	3	MC(UniMod:4)EIVFEDPKTPGEK3	27862.2	28423.1	43295.9
A0A0G2K2M3	A0A0G2K2M3	A0A0G2K2M3_RAT	Stat6	Signal transducer and activator of transcription	1	MCETLNLK	MC(UniMod:4)ETLNLK	2	MC(UniMod:4)ETLNLK2	10006.7	8854.64	9096.44
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	MCEVVLGEFLK	MC(UniMod:4)EVVLGEFLK	2	MC(UniMod:4)EVVLGEFLK2	7085.92	9636.24	6375.11
A0A0G2K7U7	A0A0G2K7U7	A0A0G2K7U7_RAT	Ankrd27	Ankyrin repeat domain 27	1	MCHPLCSCEDCEK	MC(UniMod:4)HPLC(UniMod:4)SC(UniMod:4)EDC(UniMod:4)EK	3	MC(UniMod:4)HPLC(UniMod:4)SC(UniMod:4)EDC(UniMod:4)EK3	1779.79	4094.7	3301.91
Q498T9	Q498T9	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	1	MCIHNDGTK	MC(UniMod:4)IHNDGTK	2	MC(UniMod:4)IHNDGTK2	3424.85		4856.02
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	MCINTEWGAFGDDGSLEDIR	MC(UniMod:4)INTEWGAFGDDGSLEDIR	3	MC(UniMod:4)INTEWGAFGDDGSLEDIR3	16525.3	12802.7	17714.9
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	MCINTEWGAFGDDGSLEDIRTEFDR	MC(UniMod:4)INTEWGAFGDDGSLEDIRTEFDR	3	MC(UniMod:4)INTEWGAFGDDGSLEDIRTEFDR3	14947.1	10433.4	8586.54
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	MCLAHSAGVVPTSQSLADMQDHAPAIGR	MC(UniMod:4)LAHSAGVVPTSQSLADMQDHAPAIGR	4	MC(UniMod:4)LAHSAGVVPTSQSLADMQDHAPAIGR4	4439.72	4695.13	
P13107	P13107	CP2B3_RAT	Cyp2b3	Cytochrome P450 2B3	1	MCLGEGIAR	MC(UniMod:4)LGEGIAR	2	MC(UniMod:4)LGEGIAR2	4923.2		3366.86
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	MCLVEIEK	MC(UniMod:4)LVEIEK	2	MC(UniMod:4)LVEIEK2	121360	97671.2	111551
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	MCLVPGK	MC(UniMod:4)LVPGK	2	MC(UniMod:4)LVPGK2	58703.5	54599.3	56656.9
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	MCLVYPASK	MC(UniMod:4)LVYPASK	2	MC(UniMod:4)LVYPASK2	123805	150454	117354
F1LN92	F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	1	MCMTLGGR	MC(UniMod:4)MTLGGR	2	MC(UniMod:4)MTLGGR2	18123.1	13790.8	11458.6
A0A8I5ZMX2	A0A8I5ZMX2	A0A8I5ZMX2_RAT	Adamts3	ADAM metallopeptidase with thrombospondin type 1, motif 3	1	MCNIQECTHPLWAAEAWEHCSR	MC(UniMod:4)NIQEC(UniMod:4)THPLWAAEAWEHC(UniMod:4)SR	4	MC(UniMod:4)NIQEC(UniMod:4)THPLWAAEAWEHC(UniMod:4)SR4	3655.92	5772.36	4187.81
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	MCPIFQISNVTGENLDLLK	MC(UniMod:4)PIFQISNVTGENLDLLK	3	MC(UniMod:4)PIFQISNVTGENLDLLK3	15272.5	20178.4	20031.4
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	MCPPLTTK	MC(UniMod:4)PPLTTK	2	MC(UniMod:4)PPLTTK2	41521.6	40798.3	40337.4
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	MCSLMLSK	MC(UniMod:4)SLMLSK	2	MC(UniMod:4)SLMLSK2	55914	57112.3	61540.4
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	MCSPSHSNSPASQQPLANHPR	MC(UniMod:4)SPSHSNSPASQQPLANHPR	4	MC(UniMod:4)SPSHSNSPASQQPLANHPR4	8849.94	8255.31	12894.3
F1M8V2	F1M8V2	F1M8V2_RAT	Ube4b	Ubiquitin conjugation factor E4	1	MCSQPAVSQLLSNIR	MC(UniMod:4)SQPAVSQLLSNIR	2	MC(UniMod:4)SQPAVSQLLSNIR2	5459.32	6747.28	7125.84
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	MCTFHPR	MC(UniMod:4)TFHPR	2	MC(UniMod:4)TFHPR2	68965.4	52048.3	51169.1
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	MCTLIDK	MC(UniMod:4)TLIDK	1	MC(UniMod:4)TLIDK1	3142.06		
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	MCTLIDK	MC(UniMod:4)TLIDK	2	MC(UniMod:4)TLIDK2	309132	328279	293669
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	MCTLIDKFDEHDGPVR	MC(UniMod:4)TLIDKFDEHDGPVR	3	MC(UniMod:4)TLIDKFDEHDGPVR3	5797.98	11453.7	4752.01
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	MCTLIDKFDEHDGPVR	MC(UniMod:4)TLIDKFDEHDGPVR	4	MC(UniMod:4)TLIDKFDEHDGPVR4	8337.41	15580.8	6697.99
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	MCWCVDAQGIEIPGTR	MC(UniMod:4)WC(UniMod:4)VDAQGIEIPGTR	2	MC(UniMod:4)WC(UniMod:4)VDAQGIEIPGTR2	12488.5	18198.4	11181.4
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	MCWCVDAQGIEIPGTR	MC(UniMod:4)WC(UniMod:4)VDAQGIEIPGTR	3	MC(UniMod:4)WC(UniMod:4)VDAQGIEIPGTR3		4515.73	
Q4AEF8	Q4AEF8;D4ABY2	COPG1_RAT	Copg1	Coatomer subunit gamma-1	0	MCYLTIK	MC(UniMod:4)YLTIK	2	MC(UniMod:4)YLTIK2	220368	344225	291978
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	MDAAIGNQNK	MDAAIGNQNK	2	MDAAIGNQNK2	8201.54	10577.7	12734.5
Q7M6Z5	Q7M6Z5	KIF27_RAT	Kif27	Kinesin-like protein KIF27	1	MDAAKLR	MDAAKLR	2	MDAAKLR2	11234.5	7903.25	11313.1
Q1EHB3	Q1EHB3	ATS7_RAT	Adamts7	A disintegrin and metalloproteinase with thrombospondin motifs 7	1	MDAAVDGTSCGK	MDAAVDGTSC(UniMod:4)GK	2	MDAAVDGTSC(UniMod:4)GK2	1593.77	3021.63	
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	MDADGFLPITLIASFHR	MDADGFLPITLIASFHR	3	MDADGFLPITLIASFHR3	2194.2	5356.39	5690.14
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	MDADINVTK	MDADINVTK	2	MDADINVTK2	46402	46417.6	60742.2
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	MDAEFGHDSGFEVR	MDAEFGHDSGFEVR	2	MDAEFGHDSGFEVR2	2865.14	2859.68	
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	MDAEFGHDSGFEVR	MDAEFGHDSGFEVR	3	MDAEFGHDSGFEVR3	50876	56285.7	83126.2
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	MDAGMIGNQVNR	MDAGMIGNQVNR	2	MDAGMIGNQVNR2	28275.2	16928.3	16709.1
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	MDAGMIGNQVNRK	MDAGMIGNQVNRK	3	MDAGMIGNQVNRK3	12073.4	4463.4	11761.4
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	MDAHPPR	MDAHPPR	2	MDAHPPR2	475969		210304
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	MDAPDGCPPAVYDVMK	MDAPDGC(UniMod:4)PPAVYDVMK	2	MDAPDGC(UniMod:4)PPAVYDVMK2	80608.8	78061.4	80735.4
Q8CG45	Q8CG45	ARK72_RAT	Akr7a2	Aflatoxin B1 aldehyde reductase member 2	1	MDASASAATVR	MDASASAATVR	2	MDASASAATVR2	6366.39	5555.17	12013.6
Q810F4	Q810F4	FAM3C_RAT	Fam3c	Protein FAM3C	1	MDASLGSLFAR	MDASLGSLFAR	2	MDASLGSLFAR2	4852.7	4670.21	5446
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	MDATANDITNDR	MDATANDITNDR	2	MDATANDITNDR2	636669	597191	568815
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	MDATANDITNDR	MDATANDITNDR	3	MDATANDITNDR3	5539.08	8007.78	
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	MDATANDITNDRYK	MDATANDITNDRYK	2	MDATANDITNDRYK2	3631.03	5791.46	3512.12
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	MDATANDITNDRYK	MDATANDITNDRYK	3	MDATANDITNDRYK3	210133	231139	328089
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	MDATANDVPSPYEVK	MDATANDVPSPYEVK	2	MDATANDVPSPYEVK2	190954	158706	163750
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	MDATANDVPSPYEVK	MDATANDVPSPYEVK	3	MDATANDVPSPYEVK3	26316.8	32467.2	30883.6
M0R402	M0R402	M0R402_RAT	Tmx3	Thioredoxin-related transmembrane protein 3	1	MDATSYSSIASEFGVR	MDATSYSSIASEFGVR	2	MDATSYSSIASEFGVR2	41733.2	39765.9	42736
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	MDCQECPEGYR	MDC(UniMod:4)QEC(UniMod:4)PEGYR	2	MDC(UniMod:4)QEC(UniMod:4)PEGYR2	4.01732e+06	4.13898e+06	4.82146e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	MDCQECPEGYR	MDC(UniMod:4)QEC(UniMod:4)PEGYR	3	MDC(UniMod:4)QEC(UniMod:4)PEGYR3	44000.5	53658.1	68749.8
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	MDCQEIPEGYK	MDC(UniMod:4)QEIPEGYK	2	MDC(UniMod:4)QEIPEGYK2	4436.55	5834.42	4668.82
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	MDDDEEMK	MDDDEEMK	2	MDDDEEMK2	102848	143043	117174
A0A0G2K3K5	A0A0G2K3K5	A0A0G2K3K5_RAT	B4galt5	Beta-1,4-galactosyltransferase	1	MDDIHELFSR	MDDIHELFSR	2	MDDIHELFSR2	4356.97	3630.06	
A0A0G2K3K5	A0A0G2K3K5	A0A0G2K3K5_RAT	B4galt5	Beta-1,4-galactosyltransferase	1	MDDIHELFSR	MDDIHELFSR	3	MDDIHELFSR3	12310.9	18394	15186
A0A0G2K3K5	A0A0G2K3K5	A0A0G2K3K5_RAT	B4galt5	Beta-1,4-galactosyltransferase	1	MDDIHELFSRDPAIR	MDDIHELFSRDPAIR	3	MDDIHELFSRDPAIR3	2236.59		
B1H257	B1H257	B1H257_RAT	Borcs5	BLOC-1-related complex subunit 5	1	MDDIVVVAQGSQASR	MDDIVVVAQGSQASR	2	MDDIVVVAQGSQASR2	3490.2	1463.37	3986.75
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	MDDPTVNWSNER	MDDPTVNWSNER	2	MDDPTVNWSNER2	90945.1	80993.2	70767.4
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	MDDPTVNWSNER	MDDPTVNWSNER	3	MDDPTVNWSNER3	3202.58	3830.46	
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	MDDPTVNWSNERYEECK	MDDPTVNWSNERYEEC(UniMod:4)K	3	MDDPTVNWSNERYEEC(UniMod:4)K3	23167.2	29688.7	20658.3
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	MDDPTVNWSNERYEECKEK	MDDPTVNWSNERYEEC(UniMod:4)KEK	3	MDDPTVNWSNERYEEC(UniMod:4)KEK3	6953.61	4455.2	10169.7
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	MDDPTVNWSNERYEECKEK	MDDPTVNWSNERYEEC(UniMod:4)KEK	4	MDDPTVNWSNERYEEC(UniMod:4)KEK4	22065.7	46073.2	36185
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	MDDREDLVYQAK	MDDREDLVYQAK	3	MDDREDLVYQAK3	5726.76		
A0A8I6GLU8	A0A8I6GLU8	A0A8I6GLU8_RAT	Tardbp	TAR DNA-binding protein 43	1	MDEADASSAVK	MDEADASSAVK	2	MDEADASSAVK2	29676	32423.7	49419
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	MDEEEEDNEGGEWER	MDEEEEDNEGGEWER	2	MDEEEEDNEGGEWER2	3930.98	3170.97	4359.6
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	MDEEFTK	MDEEFTK	2	MDEEFTK2	117646	122538	130783
Q07205	Q07205;A0A8I6ADE0;A0A8I5ZMQ1	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	MDEISDHAK	MDEISDHAK	2	MDEISDHAK2	22835.1	26335.1	22208.5
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	MDELGAGIAQSR	MDELGAGIAQSR	2	MDELGAGIAQSR2	18658.4	17757.8	23392.9
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	MDELKEGLR	MDELKEGLR	2	MDELKEGLR2	4027.01	3679.4	3649.57
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	MDELQLFR	MDELQLFR	2	MDELQLFR2	1.50993e+06	1.52123e+06	1.73104e+06
Q62609	Q62609	NOE1_RAT	Olfm1	Noelin	1	MDELRPLIPVLEEYK	MDELRPLIPVLEEYK	3	MDELRPLIPVLEEYK3	18598.7	19221.8	29115.4
P47942	P47942;Q62950;Q62952	DPYL2_RAT	Dpysl2	Dihydropyrimidinase-related protein 2	0	MDENQFVAVTSTNAAK	MDENQFVAVTSTNAAK	2	MDENQFVAVTSTNAAK2	11150.5	12481.7	12783.5
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	MDEQELVEPVWCPYLLVPR	MDEQELVEPVWC(UniMod:4)PYLLVPR	3	MDEQELVEPVWC(UniMod:4)PYLLVPR3	6944.15	3883.41	9304.73
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	MDETGMVHCDTAVGTPDYISPEVLK	MDETGMVHC(UniMod:4)DTAVGTPDYISPEVLK	3	MDETGMVHC(UniMod:4)DTAVGTPDYISPEVLK3	12808	22779	19177.6
D3ZL11	D3ZL11	D3ZL11_RAT	Rbsn	Rabenosyn, RAB effector	1	MDEVEVLTENLR	MDEVEVLTENLR	2	MDEVEVLTENLR2	4806.72	6634.73	5948.86
B5DFN2	B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	1	MDEYVASLHLPSFDAHLTELTDDQAK	MDEYVASLHLPSFDAHLTELTDDQAK	4	MDEYVASLHLPSFDAHLTELTDDQAK4	24382.4	28840.5	21493.9
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	MDFILSHALYCR	MDFILSHALYC(UniMod:4)R	3	MDFILSHALYC(UniMod:4)R3	80016.9	95775.1	92918.1
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	MDFTAAR	MDFTAAR	2	MDFTAAR2	126712	113793	143643
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	MDGLLMVSGR	MDGLLMVSGR	2	MDGLLMVSGR2	6536.09	10970.6	3373.26
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	MDGMGIEMIDEK	MDGMGIEMIDEK	2	MDGMGIEMIDEK2	20697.4	23450.9	26409.8
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	MDGQTDFWR	MDGQTDFWR	2	MDGQTDFWR2	28899.7	26604.7	18257
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	MDGSDIVTCVNTK	MDGSDIVTC(UniMod:4)VNTK	2	MDGSDIVTC(UniMod:4)VNTK2	178314	156866	151445
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	MDGSDIVTCVNTK	MDGSDIVTC(UniMod:4)VNTK	3	MDGSDIVTC(UniMod:4)VNTK3	2392.14		1799.78
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	MDGTYVCSYTPVK	MDGTYVC(UniMod:4)SYTPVK	2	MDGTYVC(UniMod:4)SYTPVK2	6514.3	4357.03	7976.03
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	MDHTFFPGYR	MDHTFFPGYR	2	MDHTFFPGYR2	9745.87	16048.1	5526
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	MDHTFFPGYR	MDHTFFPGYR	3	MDHTFFPGYR3	89474.3	87086.4	92801.1
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	MDHVYGLSIVCLNK	MDHVYGLSIVC(UniMod:4)LNK	2	MDHVYGLSIVC(UniMod:4)LNK2	6837.51	5208.49	12171.8
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	MDHVYGLSIVCLNK	MDHVYGLSIVC(UniMod:4)LNK	3	MDHVYGLSIVC(UniMod:4)LNK3	10042.9	8038.96	7102.44
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	MDIDDVTR	MDIDDVTR	2	MDIDDVTR2	20021.2	24911.2	24703.5
P23764	P23764	GPX3_RAT	Gpx3	Glutathione peroxidase 3	1	MDILSYMR	MDILSYMR	2	MDILSYMR2	2.08524e+07	2.05274e+07	2.15887e+07
P23764	P23764	GPX3_RAT	Gpx3	Glutathione peroxidase 3	1	MDILSYMRR	MDILSYMRR	3	MDILSYMRR3	39298.1	36707.4	49201.5
A0A8I6AL39	A0A8I6AL39	A0A8I6AL39_RAT	Fgd3	FYVE, RhoGEF and PH domain containing 3	1	MDISDLQVQDVVKPNAAR	MDISDLQVQDVVKPNAAR	3	MDISDLQVQDVVKPNAAR3	5314.25	12469.2	8016.68
O35783	O35783	CALU_RAT	Calu	Calumenin	1	MDKEETK	MDKEETK	1	MDKEETK1	332.328		3462.87
O35783	O35783	CALU_RAT	Calu	Calumenin	1	MDKEETK	MDKEETK	2	MDKEETK2	7555.54	3403.03	5302.83
Q5XIK7	Q5XIK7	KATL1_RAT	Katnal1	Katanin p60 ATPase-containing subunit A-like 1	1	MDKPPDFPVSCR	MDKPPDFPVSC(UniMod:4)R	3	MDKPPDFPVSC(UniMod:4)R3			6967.21
I6L9G5	I6L9G5	RCN3_RAT	Rcn3	Reticulocalbin-3	1	MDLAGDSDGWVSLAELR	MDLAGDSDGWVSLAELR	2	MDLAGDSDGWVSLAELR2	28164.1	29591.8	27096.5
I6L9G5	I6L9G5	RCN3_RAT	Rcn3	Reticulocalbin-3	1	MDLAGDSDGWVSLAELR	MDLAGDSDGWVSLAELR	3	MDLAGDSDGWVSLAELR3		1640.93	
A0A8I5ZQE4	A0A8I5ZQE4	A0A8I5ZQE4_RAT	Supt5h	Transcription elongation factor SPT5	1	MDLEDQQIK	MDLEDQQIK	2	MDLEDQQIK2	2534.83	5528.72	
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	MDLEKPNYIVPDYMPVVYDK	MDLEKPNYIVPDYMPVVYDK	3	MDLEKPNYIVPDYMPVVYDK3	64658.1	56249	55601.8
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	MDLEKPNYIVPDYMPVVYDKLPQPPTHR	MDLEKPNYIVPDYMPVVYDKLPQPPTHR	4	MDLEKPNYIVPDYMPVVYDKLPQPPTHR4	21000	30847.4	30739.3
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	MDLFSALIK	MDLFSALIK	2	MDLFSALIK2	173687	273817	211804
Q924S1	Q924S1	PLCD_RAT	Agpat4	1-acyl-sn-glycerol-3-phosphate acyltransferase delta	1	MDLIGLLK	MDLIGLLK	2	MDLIGLLK2	7411.74	5942.9	7979.75
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	MDLLLTK	MDLLLTK	2	MDLLLTK2	26808.6	22217.2	27253.6
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	MDLVLELK	MDLVLELK	2	MDLVLELK2	11590.6		8035.75
Q63486	Q63486;Q63487	RRAGA_RAT	Rraga	Ras-related GTP-binding protein A	0	MDLVQEDQR	MDLVQEDQR	2	MDLVQEDQR2	83452.9	79525.7	81891.6
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	MDLVSNWELIR	MDLVSNWELIR	2	MDLVSNWELIR2	7425.09	3860.86	
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	MDNIYSGDK	MDNIYSGDK	2	MDNIYSGDK2	1.54416e+06	1.87033e+06	1.82511e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	MDNIYSGDKFYK	MDNIYSGDKFYK	2	MDNIYSGDKFYK2	49257.9	66447.1	54212.8
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	MDNIYSGDKFYK	MDNIYSGDKFYK	3	MDNIYSGDKFYK3	236303	324149	281629
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	MDNPFYPR	MDNPFYPR	2	MDNPFYPR2	63059.1	62765.3	59059.2
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	MDNSVLVLIVGLSTIGAGAYAYK	MDNSVLVLIVGLSTIGAGAYAYK	3	MDNSVLVLIVGLSTIGAGAYAYK3	1249.95		
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	MDNVCTTK	MDNVC(UniMod:4)TTK	2	MDNVC(UniMod:4)TTK2	51408	45092.8	41035.2
A0A0G2JZA7	A0A0G2JZA7	A0A0G2JZA7_RAT	Cemip2	hyaluronoglucosaminidase	1	MDNYLIR	MDNYLIR	2	MDNYLIR2	5664.72	4624.1	7443.05
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	MDPASTLGLSTESIHGYSLSHVK	MDPASTLGLSTESIHGYSLSHVK	4	MDPASTLGLSTESIHGYSLSHVK4	7802.82	5592.6	8120.95
P01883	P01883	IGHD_RAT		Ig delta chain C region (Fragment)	1	MDPINFVTAQPVR	MDPINFVTAQPVR	2	MDPINFVTAQPVR2	14512.1	8918.46	9357.37
P01883	P01883	IGHD_RAT		Ig delta chain C region (Fragment)	1	MDPINFVTAQPVR	MDPINFVTAQPVR	3	MDPINFVTAQPVR3	2714.95	4902.96	2415.67
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	MDPLAKPMQYK	MDPLAKPMQYK	2	MDPLAKPMQYK2	28617.5	23728	17790.8
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	MDPLAKPMQYK	MDPLAKPMQYK	3	MDPLAKPMQYK3	124553	152485	147684
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	MDPPDEVCYR	MDPPDEVC(UniMod:4)YR	2	MDPPDEVC(UniMod:4)YR2	27783	17331.9	
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	MDPQDQAQR	MDPQDQAQR	2	MDPQDQAQR2	25049	17962	18026.1
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	MDPSLFPPVPLFSGVPSR	MDPSLFPPVPLFSGVPSR	2	MDPSLFPPVPLFSGVPSR2	21353.2	22066.6	26264
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	MDPSLFPPVPLFSGVPSR	MDPSLFPPVPLFSGVPSR	3	MDPSLFPPVPLFSGVPSR3	4414.58	4223.74	
Q63692	Q63692	CDC37_RAT	Cdc37	Hsp90 co-chaperone Cdc37	1	MDPTDAK	MDPTDAK	1	MDPTDAK1	28031.6	22235.4	28382.7
Q63692	Q63692	CDC37_RAT	Cdc37	Hsp90 co-chaperone Cdc37	1	MDPTDAK	MDPTDAK	2	MDPTDAK2	455861	484436	424350
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	MDPVAYR	MDPVAYR	2	MDPVAYR2	15730.6	11906.5	19167.4
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	MDPVNNINVDKDKPYLYCFR	MDPVNNINVDKDKPYLYC(UniMod:4)FR	4	MDPVNNINVDKDKPYLYC(UniMod:4)FR4	5369.6	10667.9	5354.01
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	MDQAIIFCR	MDQAIIFC(UniMod:4)R	2	MDQAIIFC(UniMod:4)R2	9441.03	7635.17	6986.51
A0A8I6AD03	A0A8I6AD03	A0A8I6AD03_RAT	Aplp1	Amyloid beta precursor like protein 1	1	MDQCESSTR	MDQC(UniMod:4)ESSTR	2	MDQC(UniMod:4)ESSTR2			11529.9
Q6IUP3	Q6IUP3	ELP5_RAT	Elp5	Elongator complex protein 5	1	MDQTSASILCR	MDQTSASILC(UniMod:4)R	2	MDQTSASILC(UniMod:4)R2	10969.7	10513	12284.4
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	MDQVNWQQER	MDQVNWQQER	2	MDQVNWQQER2	16902	13979.7	21344.2
M0RD03	M0RD03;A0A8I6AMY8	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	0	MDQYFNQMEK	MDQYFNQMEK	2	MDQYFNQMEK2	154806	186864	175051
O08770	O08770	GPV_RAT	Gp5	Platelet glycoprotein V	1	MDRGVLQSHSFSGMTVLQR	MDRGVLQSHSFSGMTVLQR	4	MDRGVLQSHSFSGMTVLQR4	5574.24	4971.26	5493.86
A0A0G2JWD0	A0A0G2JWD0	A0A0G2JWD0_RAT	Prom1	Prominin 1	1	MDSEDVYDDVETVPMK	MDSEDVYDDVETVPMK	2	MDSEDVYDDVETVPMK2	3343.24	5139.16	
Q5XIC1	Q5XIC1	GMPPA_RAT	Gmppa	Mannose-1-phosphate guanyltransferase alpha	1	MDSESLFK	MDSESLFK	2	MDSESLFK2	16778.9	16154.4	17858
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	MDSTANEVEAVK	MDSTANEVEAVK	2	MDSTANEVEAVK2	1.20682e+06	1.50794e+06	1.42754e+06
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	MDSTANEVEAVK	MDSTANEVEAVK	3	MDSTANEVEAVK3	10321.7	10447.7	9720.53
P62630	P62630;F1M6C2;M0R757;A0A8I6AQI9	EF1A1_RAT	Eef1a1	Elongation factor 1-alpha 1	0	MDSTEPPYSQK	MDSTEPPYSQK	2	MDSTEPPYSQK2	121212	115859	111674
Q03343	Q04400;Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	0	MDSTGVPDR	MDSTGVPDR	2	MDSTGVPDR2	117029	109287	120158
M0R4P9	M0R4P9	M0R4P9_RAT	Ube2h	Ubiquitin-conjugating enzyme E2H	1	MDTDVVK	MDTDVVK	2	MDTDVVK2	95201.4	102947	102842
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	MDTELAESGSNFSVGQR	MDTELAESGSNFSVGQR	2	MDTELAESGSNFSVGQR2	14469.5	18184.1	17691.3
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	MDTELAESGSNFSVGQR	MDTELAESGSNFSVGQR	3	MDTELAESGSNFSVGQR3	16983	19430.6	19305.9
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	MDTELLNVAK	MDTELLNVAK	2	MDTELLNVAK2	4874.48	6210.75	2563.07
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	MDTIDHDDEVIR	MDTIDHDDEVIR	3	MDTIDHDDEVIR3	33016.5	42541	33379.1
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	MDTNKDDPELMLGR	MDTNKDDPELMLGR	3	MDTNKDDPELMLGR3	16021.8	19952	12203.3
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	MDTQEETAAELSLR	MDTQEETAAELSLR	2	MDTQEETAAELSLR2	32424.1	41286.1	20908.5
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	MDTTGVECR	MDTTGVEC(UniMod:4)R	2	MDTTGVEC(UniMod:4)R2	27787.3	28532.6	33514.5
A0A8I5ZQE9	A0A8I5ZQE9	A0A8I5ZQE9_RAT	Irf9	Interferon regulatory factor 9	1	MDVAEPYK	MDVAEPYK	2	MDVAEPYK2	9310.23	8965.4	4679.94
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	MDVCETHLHWHTVAK	MDVC(UniMod:4)ETHLHWHTVAK	3	MDVC(UniMod:4)ETHLHWHTVAK3	13139.6	10943	17051.9
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	MDVCETHLHWHTVAK	MDVC(UniMod:4)ETHLHWHTVAK	4	MDVC(UniMod:4)ETHLHWHTVAK4	44325.2	49315.2	41422.7
Q62904	Q62904	DHB7_RAT	Hsd17b7	3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7	1	MDVDEDTAEK	MDVDEDTAEK	2	MDVDEDTAEK2	7365.19	6339.23	7924.56
Q5Y4N8	Q5Y4N8	AGRE1_RAT	Adgre1	Adhesion G protein-coupled receptor E2	1	MDVGCFIIK	MDVGC(UniMod:4)FIIK	2	MDVGC(UniMod:4)FIIK2	26199.2	35156.7	33790.2
P47861	P29101;P21707;P47861	SYT5_RAT	Syt5	Synaptotagmin-5	0	MDVGGLSDPYVK	MDVGGLSDPYVK	2	MDVGGLSDPYVK2	39231.9	42832	42046
D3Z8Q7	D3Z8Q7	D3Z8Q7_RAT	Ciao2b	Cytosolic iron-sulfur assembly component 2B	1	MDVHITPGTHASEHAVNK	MDVHITPGTHASEHAVNK	4	MDVHITPGTHASEHAVNK4	10854.5	14915	6984.23
P60570	P60570	PANX1_RAT	Panx1	Pannexin-1	1	MDVIDGK	MDVIDGK	2	MDVIDGK2	151311	141261	148582
P60570	P60570	PANX1_RAT	Panx1	Pannexin-1	1	MDVIDGKVPMSLQTK	MDVIDGKVPMSLQTK	3	MDVIDGKVPMSLQTK3	8822.22	16717.2	19165.7
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	MDVVFGK	MDVVFGK	1	MDVVFGK1	11260.7	9082.76	13731
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	MDVVFGK	MDVVFGK	2	MDVVFGK2	425435	494541	476251
P55213	P55213	CASP3_RAT	Casp3	Caspase-3	1	MDYPEMGLCIIINNK	MDYPEMGLC(UniMod:4)IIINNK	2	MDYPEMGLC(UniMod:4)IIINNK2	10831.5	7606.51	15538.3
E9PTK4	E9PTK4	E9PTK4_RAT	Thnsl1	Threonine synthase-like 1	1	MDYQACVADVDVLK	MDYQAC(UniMod:4)VADVDVLK	2	MDYQAC(UniMod:4)VADVDVLK2			2494
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	MDYRGDAVAFFILPDQGK	MDYRGDAVAFFILPDQGK	3	MDYRGDAVAFFILPDQGK3	15989.8	17031.1	22504.1
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	MDYVEINIDHK	MDYVEINIDHK	3	MDYVEINIDHK3	6942.65	6602.25	3118.98
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	MEADLEK	MEADLEK	2	MEADLEK2	53810.4	50624.8	55813.5
Q4G002	A0A0G2KA93;Q4G002	Q4G002_RAT	RT1-T24-4	Histocompatibility 2, T region locus 24	0	MEAEPCADWLR	MEAEPC(UniMod:4)ADWLR	2	MEAEPC(UniMod:4)ADWLR2	91076.5	64644.3	69633.3
F1LXS3	F1LXS3	F1LXS3_RAT	Matn2	Matrilin 2	1	MEALENR	MEALENR	2	MEALENR2	10777.8	11481.4	9569.71
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	MEAVPDTER	MEAVPDTER	2	MEAVPDTER2	527379	520234	514027
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	MEAVPDTERK	MEAVPDTERK	2	MEAVPDTERK2	43736.7	47624.2	39952.8
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	MEAVPDTERK	MEAVPDTERK	3	MEAVPDTERK3	121521	144947	168441
A0A8I6GK63	A0A8I6GK63	A0A8I6GK63_RAT	Smc4	Structural maintenance of chromosomes protein	1	MECQLER	MEC(UniMod:4)QLER	2	MEC(UniMod:4)QLER2	35589.9	38827.5	28607.4
P14882	P14882	PCCA_RAT	Pcca	Propionyl-CoA carboxylase alpha chain, mitochondrial	1	MEDALDSYVIR	MEDALDSYVIR	2	MEDALDSYVIR2	11479.3	8098.17	11118.8
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	MEDEMDR	MEDEMDR	2	MEDEMDR2	26641.5	32160.6	34574.4
G3V6Q3	G3V6Q3	G3V6Q3_RAT	Wdr13	Uncharacterized protein	1	MEDFEDDPR	MEDFEDDPR	2	MEDFEDDPR2	9323.33	4763.4	4895.68
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	MEDGEFWMSFR	MEDGEFWMSFR	2	MEDGEFWMSFR2	113367	90265.6	98093.1
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	MEDGVGCLETAEEAK	MEDGVGC(UniMod:4)LETAEEAK	2	MEDGVGC(UniMod:4)LETAEEAK2	6812.76	12573.3	10587.2
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	MEDGVGCLETAEEAK	MEDGVGC(UniMod:4)LETAEEAK	3	MEDGVGC(UniMod:4)LETAEEAK3	667657	921237	865995
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	MEDGVGCLETAEEAKR	MEDGVGC(UniMod:4)LETAEEAKR	2	MEDGVGC(UniMod:4)LETAEEAKR2	24957.4	40082.4	27426.1
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	MEDGVGCLETAEEAKR	MEDGVGC(UniMod:4)LETAEEAKR	3	MEDGVGC(UniMod:4)LETAEEAKR3	640041	815238	691722
D3ZYT8	D3ZYT8	D3ZYT8_RAT	Pikfyve	1-phosphatidylinositol-3-phosphate 5-kinase	1	MEDIFAQK	MEDIFAQK	2	MEDIFAQK2	11638	8818.03	8972.24
P97689	P97689	UT1_RAT	Slc14a1	Urea transporter 1	1	MEDIPTMVK	MEDIPTMVK	2	MEDIPTMVK2	3065.58	2485.55	2741.13
A0A8I5ZKD4	A0A8I5ZKD4	A0A8I5ZKD4_RAT	Nhlrc3	NHL repeat containing 3	1	MEDPLFR	MEDPLFR	2	MEDPLFR2	13320.1	6518.87	6281.18
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	MEDSGIYVCEGINEAGISK	MEDSGIYVC(UniMod:4)EGINEAGISK	3	MEDSGIYVC(UniMod:4)EGINEAGISK3	17191.2	8320.76	16642.3
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	MEDSGIYVCEGINEAGISKK	MEDSGIYVC(UniMod:4)EGINEAGISKK	3	MEDSGIYVC(UniMod:4)EGINEAGISKK3	5905.33	7481.8	9530.28
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	MEDSGIYVCEGVNLVGR	MEDSGIYVC(UniMod:4)EGVNLVGR	2	MEDSGIYVC(UniMod:4)EGVNLVGR2	39702.3	41701.7	40363.1
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	MEDSGIYVCEGVNLVGR	MEDSGIYVC(UniMod:4)EGVNLVGR	3	MEDSGIYVC(UniMod:4)EGVNLVGR3	9116.84	5825.25	5211.77
A0A8I6G6W8	A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	1	MEDTLVNNVPLPSSLPLPK	MEDTLVNNVPLPSSLPLPK	3	MEDTLVNNVPLPSSLPLPK3	4188.13	5391.84	1724.41
A0A0G2K2B7	A0A0G2K2B7	A0A0G2K2B7_RAT	Wdr20	WD repeat domain 20	1	MEDVPLLEPLICK	MEDVPLLEPLIC(UniMod:4)K	2	MEDVPLLEPLIC(UniMod:4)K2	12539.6	14666.1	12456.3
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	MEEADALIESLCR	MEEADALIESLC(UniMod:4)R	2	MEEADALIESLC(UniMod:4)R2	63856.4	57792.1	61941.9
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	MEEADALIESLCR	MEEADALIESLC(UniMod:4)R	3	MEEADALIESLC(UniMod:4)R3	20247.3	22397.8	25821.7
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	MEEAHLLSAADVLR	MEEAHLLSAADVLR	3	MEEAHLLSAADVLR3	7398.17		3707.62
Q4V8K3	Q4V8K3;A0A8I6A9B2;A0A0G2K7P4	NAA11_RAT	Naa11	N-alpha-acetyltransferase 11	0	MEEDPDDVPHGHITSLAVK	MEEDPDDVPHGHITSLAVK	3	MEEDPDDVPHGHITSLAVK3	7797.42	15309.3	13676.2
Q4V8K3	Q4V8K3;A0A8I6A9B2;A0A0G2K7P4	NAA11_RAT	Naa11	N-alpha-acetyltransferase 11	0	MEEDPDDVPHGHITSLAVK	MEEDPDDVPHGHITSLAVK	4	MEEDPDDVPHGHITSLAVK4	32193	33447.9	38532.1
P97586	P97586	CGRE1_RAT	Cgref1	Cell growth regulator with EF hand domain protein 1	1	MEEDPEQMNR	MEEDPEQMNR	2	MEEDPEQMNR2	23565	20809.3	11593.6
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	MEEEELTVHGLLETSSEK	MEEEELTVHGLLETSSEK	3	MEEEELTVHGLLETSSEK3	22568.7	11266.7	21228.5
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	MEEFKDQLPADECNK	MEEFKDQLPADEC(UniMod:4)NK	2	MEEFKDQLPADEC(UniMod:4)NK2	11339.9	10257.5	17555.7
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	MEEFKDQLPADECNK	MEEFKDQLPADEC(UniMod:4)NK	3	MEEFKDQLPADEC(UniMod:4)NK3	164648	157713	171441
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	MEEFQIYEK	MEEFQIYEK	2	MEEFQIYEK2	16085.7	18099.2	13630.8
D3ZJZ0	D3ZJZ0	D3ZJZ0_RAT	Tmem205	Transmembrane protein 205	1	MEEGEDPGSLIK	MEEGEDPGSLIK	2	MEEGEDPGSLIK2	29647.5	28415.5	30854.6
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	MEEINHLEAAESIAFR	MEEINHLEAAESIAFR	3	MEEINHLEAAESIAFR3	9417.15	14106.4	11862.1
D3ZVB7	D3ZVB7	D3ZVB7_RAT	Ogn	Osteoglycin	1	MEEIRLEGNPIALGK	MEEIRLEGNPIALGK	3	MEEIRLEGNPIALGK3	4925.01	3742.48	3979.31
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	MEEKPLSSMQK	MEEKPLSSMQK	3	MEEKPLSSMQK3	6648.08	9175.31	5495.7
A0A8I6ARU6	A0A8I6ARU6	A0A8I6ARU6_RAT	Galk1	Galactokinase 1	1	MEELEAGR	MEELEAGR	2	MEELEAGR2	31476.3	33253.9	25888.2
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	MEEMQQHNMSWIEVQFLK	MEEMQQHNMSWIEVQFLK	3	MEEMQQHNMSWIEVQFLK3	7652.56	2424.73	
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	MEENEKELAACQLR	MEENEKELAAC(UniMod:4)QLR	2	MEENEKELAAC(UniMod:4)QLR2	4292.28	1256.9	4252.3
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	MEENEKELAACQLR	MEENEKELAAC(UniMod:4)QLR	3	MEENEKELAAC(UniMod:4)QLR3	60995.4	70054.8	32289
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	MEENPPVK	MEENPPVK	2	MEENPPVK2	13019.8	16285.7	17498.9
Q4V8E4	Q4V8E4	CFA36_RAT	Cfap36	Cilia- and flagella-associated protein 36	1	MEEPPIYTSETAK	MEEPPIYTSETAK	2	MEEPPIYTSETAK2	9898.68	8921.49	5853.35
Q9ER24	Q9ER24	ATX10_RAT	Atxn10	Ataxin-10	1	MEEQGLADASLLK	MEEQGLADASLLK	2	MEEQGLADASLLK2	4785.35	7658.56	2505.51
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	MEEQTQQIR	MEEQTQQIR	2	MEEQTQQIR2	192367	226390	195100
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	MEEQTQQIR	MEEQTQQIR	3	MEEQTQQIR3	593990	743329	841814
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	MEEQTQQIRLQAEIFQAR	MEEQTQQIRLQAEIFQAR	3	MEEQTQQIRLQAEIFQAR3	9516.34	14108.9	16894.7
G3V6R9	G3V6R9	G3V6R9_RAT	Bloc1s4	Biogenesis of lysosomal organelles complex 1 subunit 4	1	MEEQVTK	MEEQVTK	2	MEEQVTK2	23770.2	19852.1	26839.5
Q62733	Q62733	LAP2_RAT	Tmpo	Lamina-associated polypeptide 2, isoform beta	1	MEESFSSK	MEESFSSK	2	MEESFSSK2	6874.84	6256.2	7089.18
A0A140UHX9	A0A140UHX9	A0A140UHX9_RAT	Ccz1	CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated	1	MEESLSVVK	MEESLSVVK	2	MEESLSVVK2	5020.26		
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	MEESTAVPAQK	MEESTAVPAQK	2	MEESTAVPAQK2	27592.9	28990.4	20707
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	MEESYDLQSALR	MEESYDLQSALR	2	MEESYDLQSALR2	178643	159392	186498
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	MEESYDLQSALR	MEESYDLQSALR	3	MEESYDLQSALR3	17770.9	22899.3	24664.2
A0A8I6A538	A0A8I6A538	A0A8I6A538_RAT	Nin	Ninein	1	MEEVLER	MEEVLER	2	MEEVLER2	4822.96	3148.88	4491.91
P15127	P15127	INSR_RAT	Insr	Insulin receptor	1	MEEVSGTK	MEEVSGTK	2	MEEVSGTK2	10145.1	16152.6	18435
P24062	P24062	IGF1R_RAT	Igf1r	Insulin-like growth factor 1 receptor	1	MEEVTGTK	MEEVTGTK	2	MEEVTGTK2	3109.51	5638.91	3215.38
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	MEFDEKDLR	MEFDEKDLR	2	MEFDEKDLR2	4265.79		3792.96
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	MEFDEKDLR	MEFDEKDLR	3	MEFDEKDLR3	14732.9	22032.9	25948.5
F7FLB2	F7FLB2	F7FLB2_RAT	Pgm2	phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	1	MEFGTAGLR	MEFGTAGLR	2	MEFGTAGLR2	29735.8	38634.9	34988.5
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	MEFPLNAHFSK	MEFPLNAHFSK	2	MEFPLNAHFSK2	3422.84	3339.25	
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	MEFPLNAHFSK	MEFPLNAHFSK	3	MEFPLNAHFSK3	19232.7	24257.1	23859.8
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	MEGALASLAQELQDSK	MEGALASLAQELQDSK	2	MEGALASLAQELQDSK2	134055	142276	140147
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	MEGALASLAQELQDSK	MEGALASLAQELQDSK	3	MEGALASLAQELQDSK3	12330.5	19853.1	16363.3
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	MEGANIQPNR	MEGANIQPNR	2	MEGANIQPNR2	17167.3	19197	13260.4
Q9ES40	Q9ES40	PRAF3_RAT	Arl6ip5	PRA1 family protein 3	1	MEGIGLK	MEGIGLK	1	MEGIGLK1	11075.3	19514.6	8544.66
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	MEGNAEESTLFCFAVR	MEGNAEESTLFC(UniMod:4)FAVR	2	MEGNAEESTLFC(UniMod:4)FAVR2	56577.8	34281	40759.7
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	MEGNAEESTLFCFAVR	MEGNAEESTLFC(UniMod:4)FAVR	3	MEGNAEESTLFC(UniMod:4)FAVR3	47194.6	45465.7	37982.4
Q66HA4	Q66HA4	TAXB1_RAT	Tax1bp1	Tax1-binding protein 1 homolog	1	MEGQSPQQVSR	MEGQSPQQVSR	2	MEGQSPQQVSR2	8222.5	13640.8	8749.99
A0A0G2K1P3	A0A0G2K1P3	A0A0G2K1P3_RAT	Bnip2	BCL2 interacting protein 2	1	MEGVELK	MEGVELK	2	MEGVELK2	37359.2	44687.3	60481.5
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	MEHQLELGNLQAK	MEHQLELGNLQAK	2	MEHQLELGNLQAK2	25672.7	25243	25658.4
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	MEHQLELGNLQAK	MEHQLELGNLQAK	3	MEHQLELGNLQAK3	209335	208967	199522
D4A830	D4A830	D4A830_RAT	Ppa2	inorganic diphosphatase	1	MEIATEEPLNPIK	MEIATEEPLNPIK	2	MEIATEEPLNPIK2	20077.9	14192.1	25025
F7EPH4	F7EPH4	F7EPH4_RAT	Ppa1	inorganic diphosphatase	1	MEIATKDPLNPIK	MEIATKDPLNPIK	3	MEIATKDPLNPIK3	5843.23	3229.52	5096.83
Q29RW1	Q29RW1	MYH4_RAT	Myh4	Myosin-4	1	MEIDDLASNMETVSK	MEIDDLASNMETVSK	2	MEIDDLASNMETVSK2	3367.91		
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	MEIGLPDEK	MEIGLPDEK	2	MEIGLPDEK2	45338.4	52518.3	46588
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	MEIPVAWR	MEIPVAWR	2	MEIPVAWR2	4281.49		6666.94
P04692	P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	1	MEIQEIQLK	MEIQEIQLK	2	MEIQEIQLK2	2.57173e+06	2.55169e+06	2.76632e+06
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	MEIQEMQLKEAK	MEIQEMQLKEAK	3	MEIQEMQLKEAK3		12846.4	19297.2
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	MEIVDHALHALTDEVIIPHSGWER	MEIVDHALHALTDEVIIPHSGWER	4	MEIVDHALHALTDEVIIPHSGWER4		7048.54	
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	MEIVELEDHPFFVGVQYHPEFLSR	MEIVELEDHPFFVGVQYHPEFLSR	3	MEIVELEDHPFFVGVQYHPEFLSR3	7295.45	14850.7	4699.02
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	MEIVELEDHPFFVGVQYHPEFLSR	MEIVELEDHPFFVGVQYHPEFLSR	4	MEIVELEDHPFFVGVQYHPEFLSR4	18610.7	22907.7	14017.4
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	MEIVLTSEQLR	MEIVLTSEQLR	2	MEIVLTSEQLR2	24033.9	26062.6	17793.8
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	MELAEAHSAR	MELAEAHSAR	2	MELAEAHSAR2	6247.08	5079.74	7126.02
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	MELAEAHSARDELLHQMK	MELAEAHSARDELLHQMK	3	MELAEAHSARDELLHQMK3	2999.34	1464.43	
D3ZS52	D3ZS52	D3ZS52_RAT	Tmem258b	Transmembrane protein 258	1	MELEAMSR	MELEAMSR	2	MELEAMSR2	47657.2	44789.4	33065.6
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	MELERPGK	MELERPGK	1	MELERPGK1	34215.6	27439	21583.5
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	MELERPGK	MELERPGK	2	MELERPGK2	44369.8	7.57805e+06	7.68762e+06
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	MELERPGKDGASR	MELERPGKDGASR	2	MELERPGKDGASR2	39021.3	27958.5	22426.5
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	MELERPGKDGASR	MELERPGKDGASR	3	MELERPGKDGASR3	1.33384e+06	1.1195e+06	1.13182e+06
P35053	P35053	GPC1_RAT	Gpc1	Glypican-1	1	MELETALHDSSR	MELETALHDSSR	2	MELETALHDSSR2		3611.39	1545.21
P35053	P35053	GPC1_RAT	Gpc1	Glypican-1	1	MELETALHDSSR	MELETALHDSSR	3	MELETALHDSSR3	33538.1	36210.7	35020.2
A0A8I6GIM3	A0A8I6GIM3	A0A8I6GIM3_RAT	Ntpcr	Nucleoside-triphosphatase, cancer-related	1	MELFSQPFIQAVR	MELFSQPFIQAVR	2	MELFSQPFIQAVR2	4130.29	6597.86	8978.56
Q4KM35	Q4KM35	PSB10_RAT	Psmb10	Proteasome subunit beta type-10	1	MELHALSTGR	MELHALSTGR	2	MELHALSTGR2	37045.4	39436.5	34918.9
Q4KM35	Q4KM35	PSB10_RAT	Psmb10	Proteasome subunit beta type-10	1	MELHALSTGREPR	MELHALSTGREPR	3	MELHALSTGREPR3	247159	255769	244436
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	MELITILEK	MELITILEK	2	MELITILEK2	10606.3	15270	9264.56
P24473	P24473	GSTK1_RAT	Gstk1	Glutathione S-transferase kappa 1	1	MELLAYLLGEK	MELLAYLLGEK	2	MELLAYLLGEK2	27176.8	20410.5	21930.2
A0A8I5YC26	A0A8I5YC26	A0A8I5YC26_RAT	Mcee	Methylmalonyl CoA epimerase	1	MELLHPLGSDSPIAGFLQK	MELLHPLGSDSPIAGFLQK	3	MELLHPLGSDSPIAGFLQK3	18183.9	15475.2	16160.6
Q4V8E4	Q4V8E4	CFA36_RAT	Cfap36	Cilia- and flagella-associated protein 36	1	MELLPETSSLTQK	MELLPETSSLTQK	2	MELLPETSSLTQK2	31383.3	26466.4	30200.4
A0A8I6A896	A0A8I6A896	A0A8I6A896_RAT	Ap4b1	AP complex subunit beta	1	MELLTALMR	MELLTALMR	2	MELLTALMR2	3998.33	2058.84	3718.25
A0A8I5Y9A4	A0A8I5Y9A4;M0RA24;A0A8I6A1W0	A0A8I5Y9A4_RAT	Ndufb3	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3	0	MELPDYR	MELPDYR	2	MELPDYR2	123481	99065	85269.3
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	MELQDLELQLEER	MELQDLELQLEER	2	MELQDLELQLEER2	5299.78	16794.7	6414.29
B3DMA2	B3DMA2	ACD11_RAT	Acad11	Acyl-CoA dehydrogenase family member 11	1	MELQDQAR	MELQDQAR	2	MELQDQAR2	40208	35566.8	38849.9
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	MELQEIQLK	MELQEIQLK	2	MELQEIQLK2	3.47224e+06	3.73156e+06	3.82023e+06
P58775	P58775	TPM2_RAT	Tpm2	Tropomyosin beta chain	1	MELQEMQLK	MELQEMQLK	2	MELQEMQLK2	1.96603e+06	1.93094e+06	2.11709e+06
P58775	P58775	TPM2_RAT	Tpm2	Tropomyosin beta chain	1	MELQEMQLKEAK	MELQEMQLKEAK	3	MELQEMQLKEAK3	13512.1		
D4A3V2	D4A3V2	D4A3V2_RAT	Ndufa6	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6	1	MELQETIK	MELQETIK	2	MELQETIK2	60867	48141.9	45286.7
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	MELSVFSPYWLINK	MELSVFSPYWLINK	2	MELSVFSPYWLINK2	4578.88	4085.11	1207.08
Q3B8N7	Q3B8N7	T22D4_RAT	Tsc22d4	TSC22 domain family protein 4	1	MELVAPEETGK	MELVAPEETGK	2	MELVAPEETGK2	85228	81582.1	68517.4
Q9WVC0	Q9WVC0;A0A8I6ARI4	SEPT7_RAT	Septin7	Septin-7	0	MEMEMEQVFEMK	MEMEMEQVFEMK	2	MEMEMEQVFEMK2	20858.4	7196.94	28195.7
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	MEMGDEVR	MEMGDEVR	1	MEMGDEVR1	9280.31	15748	9468.61
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	MEMGDEVR	MEMGDEVR	2	MEMGDEVR2	4.31608e+06	4.98502e+06	5.34862e+06
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	MEMINVSGYVAQEK	MEMINVSGYVAQEK	2	MEMINVSGYVAQEK2	20273.5	24501.1	17025.1
D4A2N2	D4A2N2	D4A2N2_RAT	Inpp5b	phosphoinositide 5-phosphatase	1	MENANIPSVTLSK	MENANIPSVTLSK	2	MENANIPSVTLSK2	6219.48	13934.9	13904.4
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	MENCPDELYDIMK	MENC(UniMod:4)PDELYDIMK	2	MENC(UniMod:4)PDELYDIMK2	588797	648701	706781
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	MENCPDELYDIMK	MENC(UniMod:4)PDELYDIMK	3	MENC(UniMod:4)PDELYDIMK3	9600.71	9624.96	13729.1
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	MENDFEQK	MENDFEQK	2	MENDFEQK2	102870	110408	135954
D3ZUB7	D3ZUB7	D3ZUB7_RAT	Anapc4	Anaphase-promoting complex subunit 4	1	MENIIDQCLQKPADVIGR	MENIIDQC(UniMod:4)LQKPADVIGR	3	MENIIDQC(UniMod:4)LQKPADVIGR3	16572.4	11850.4	13033.6
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	MENLYTALR	MENLYTALR	2	MENLYTALR2	13419.3	11115.9	10669.6
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	MENPEPEESQDSLYHQSGSEFR	MENPEPEESQDSLYHQSGSEFR	3	MENPEPEESQDSLYHQSGSEFR3	63649.1	67635.4	66460.6
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	MENQALQEAK	MENQALQEAK	2	MENQALQEAK2	30481.2	27612.8	17872.2
Q6IRE4	Q6IRE4	TS101_RAT	Tsg101	Tumor susceptibility gene 101 protein	1	MENQSENNDIDEVIIPTAPLYK	MENQSENNDIDEVIIPTAPLYK	3	MENQSENNDIDEVIIPTAPLYK3	19031.7	19907	31862.9
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	MENQVLQEAR	MENQVLQEAR	2	MENQVLQEAR2	19950.7	18323.4	21674.5
Q704S8	Q704S8	CACP_RAT	Crat	Carnitine O-acetyltransferase	1	MENWLSEWWLK	MENWLSEWWLK	2	MENWLSEWWLK2	1168.44	3807.23	4026.87
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	MEPATPLAVR	MEPATPLAVR	2	MEPATPLAVR2	184436	172156	178266
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	MEPCYTK	MEPC(UniMod:4)YTK	2	MEPC(UniMod:4)YTK2	57757.1	61793.1	49680.1
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	MEPDDDVSTLQK	MEPDDDVSTLQK	2	MEPDDDVSTLQK2	67518.2	62878.4	53175.5
F7FJT3	F7FJT3	F7FJT3_RAT	Rad23a	UV excision repair protein RAD23	1	MEPDETVK	MEPDETVK	2	MEPDETVK2	108679	99865.9	95839.4
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	MEPDPAEPPSATVEAANGTEQTLDK	MEPDPAEPPSATVEAANGTEQTLDK	3	MEPDPAEPPSATVEAANGTEQTLDK3	1260.21		2638.86
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	MEPLATVESLEQYLLK	MEPLATVESLEQYLLK	3	MEPLATVESLEQYLLK3			4610.79
P62944	P52303;P62944	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	MEPLNNLQVAVK	MEPLNNLQVAVK	2	MEPLNNLQVAVK2	236035	228489	183508
P41243	P41243	MATK_RAT	Matk	Megakaryocyte-associated tyrosine-protein kinase	1	MEPPDSCPGPVHTLMGSCWEAEPSR	MEPPDSC(UniMod:4)PGPVHTLMGSC(UniMod:4)WEAEPSR	3	MEPPDSC(UniMod:4)PGPVHTLMGSC(UniMod:4)WEAEPSR3	10535	13377	6346.93
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	MEPTYQLSR	MEPTYQLSR	2	MEPTYQLSR2	806642	703680	788216
A0A8J8XM71	A0A8J8XM71	A0A8J8XM71_RAT	Smap2	Small ArfGAP2	1	MEPVVFEK	MEPVVFEK	2	MEPVVFEK2	16442.2	16124.4	
A0A8I5ZQE9	A0A8I5ZQE9	A0A8I5ZQE9_RAT	Irf9	Interferon regulatory factor 9	1	MEQAFAR	MEQAFAR	2	MEQAFAR2	20356.8	17490.1	22422.9
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	MEQDHSVR	MEQDHSVR	2	MEQDHSVR2			7386.97
A0A0G2JVX9	A0A0G2JVX9	A0A0G2JVX9_RAT	Arpp21	cAMP regulated phosphoprotein 21	1	MEQEMIDFIADSNNHYK	MEQEMIDFIADSNNHYK	3	MEQEMIDFIADSNNHYK3	2490.74	1869.13	2997.34
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	MEQHWGFGLEELYGLALR	MEQHWGFGLEELYGLALR	3	MEQHWGFGLEELYGLALR3	22862.2	30626.3	21784.2
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	MEQVEILR	MEQVEILR	2	MEQVEILR2	33644.3	29039.9	34057.4
F1M086	F1M7K9;F1M086	F1M086_RAT	Elp4	Elongator complex protein 4	0	MEQVGPVLSSR	MEQVGPVLSSR	2	MEQVGPVLSSR2	2755.35	6529.06	3338.32
Q6AYK3	Q6AYK3	INO1_RAT	Isyna1	Inositol-3-phosphate synthase 1	1	MERPFPGIKPEEVK	MERPFPGIKPEEVK	4	MERPFPGIKPEEVK4	4531.12	14570.3	8265.77
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	MERPYTFK	MERPYTFK	2	MERPYTFK2	22989.5	23996.5	15211
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	MESAELDVPIQSIFTR	MESAELDVPIQSIFTR	2	MESAELDVPIQSIFTR2	5.67554e+06	5.12838e+06	5.47205e+06
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	MESAELDVPIQSIFTR	MESAELDVPIQSIFTR	3	MESAELDVPIQSIFTR3	2.3276e+06	2.40018e+06	2.46126e+06
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	MESCLAQVLQK	MESC(UniMod:4)LAQVLQK	2	MESC(UniMod:4)LAQVLQK2	9370.95	12220.3	6692.44
F1M842	F1M842	F1M842_RAT	Tp53bp1	Tumor protein p53 binding protein 1	1	MESLGSPR	MESLGSPR	2	MESLGSPR2	8161.53	8687.07	5025.6
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	MESLPVGDDLPSLQNLLEEHK	MESLPVGDDLPSLQNLLEEHK	3	MESLPVGDDLPSLQNLLEEHK3	167930	199844	197497
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	MESMLSK	MESMLSK	2	MESMLSK2	36909.9	29684.6	28332.6
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	MESQLSASKPTGGLPETAR	MESQLSASKPTGGLPETAR	3	MESQLSASKPTGGLPETAR3	65301.2	64553.3	69130.9
Q9QZM5	A0A8I5ZLD3;Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	0	MESSINHISQTVDIHK	MESSINHISQTVDIHK	3	MESSINHISQTVDIHK3	68323.2	39883.6	60180
Q9QZM5	A0A8I5ZLD3;Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	0	MESSINHISQTVDIHK	MESSINHISQTVDIHK	4	MESSINHISQTVDIHK4	63021.4	64812.2	61332.2
Q9QZM5	A0A8I5ZLD3;Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	0	MESSINHISQTVDIHKEK	MESSINHISQTVDIHKEK	4	MESSINHISQTVDIHKEK4		3881.87	4481.38
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	MESVFNHAIR	MESVFNHAIR	2	MESVFNHAIR2	26643.7	27466.6	23959.4
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	MESVFNHAIR	MESVFNHAIR	3	MESVFNHAIR3	95665.2	103336	94922.9
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	MESVFNQAIR	MESVFNQAIR	2	MESVFNQAIR2	30374.2	38339.6	22153.2
A0A0G2QC02	A0A0G2QC02	A0A0G2QC02_RAT	Skic2	Ski2 like RNA helicase	1	METAATLLR	METAATLLR	2	METAATLLR2	8144.79	14768.7	6507.99
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	METASATCYACK	METASATC(UniMod:4)YAC(UniMod:4)K	2	METASATC(UniMod:4)YAC(UniMod:4)K2	35516.8	41823.5	33926.4
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	METLGENEYFR	METLGENEYFR	2	METLGENEYFR2	71614.9	60483.3	74820.9
B5DF45	B5DF45	TRAF6_RAT	Traf6	TNF receptor-associated factor 6	1	METQSMHVSELKR	METQSMHVSELKR	3	METQSMHVSELKR3	4492.13	2134.79	4210.32
B5DF45	B5DF45	TRAF6_RAT	Traf6	TNF receptor-associated factor 6	1	METQSMHVSELKR	METQSMHVSELKR	4	METQSMHVSELKR4	9196.88	6987.6	7500.77
Q9JK25	Q9JK25	CLIP1_RAT	Clip1	CAP-Gly domain-containing linker protein 1	1	METSHYQCQDLK	METSHYQC(UniMod:4)QDLK	3	METSHYQC(UniMod:4)QDLK3		3144.08	
Q5XI07	Q5XI07	LPP_RAT	Lpp	Lipoma-preferred partner homolog	1	METTHSFGTPSISVSTQQPPK	METTHSFGTPSISVSTQQPPK	3	METTHSFGTPSISVSTQQPPK3	9021.11	6618.35	6279.27
Q5XI07	Q5XI07	LPP_RAT	Lpp	Lipoma-preferred partner homolog	1	METTHSFGTPSISVSTQQPPKK	METTHSFGTPSISVSTQQPPKK	4	METTHSFGTPSISVSTQQPPKK4	12836.7	12397	8647.79
E9PU10	E9PU10	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	1	METVNIA	METVNIA	1	METVNIA1	28400.7	29033.2	31929.2
E9PU10	E9PU10	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	1	METVNIA	METVNIA	2	METVNIA2	15724.9	17927.1	16759.8
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	MEVDEAEK	MEVDEAEK	2	MEVDEAEK2	238575	251100	254893
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	MEVDEAEKK	MEVDEAEKK	2	MEVDEAEKK2	1508.82	1178.43	
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	MEVENPNYALTSR	MEVENPNYALTSR	2	MEVENPNYALTSR2	12489.7	16961	10192.3
P61954	P61954	GBG11_RAT	Gng11	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11	1	MEVEQLR	MEVEQLR	2	MEVEQLR2	51340.3	51323	39691.5
P61954	P61954	GBG11_RAT	Gng11	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11	1	MEVEQLRK	MEVEQLRK	2	MEVEQLRK2	45865.6	35071.3	41697.6
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	MEVEQQNR	MEVEQQNR	2	MEVEQQNR2	12084.6	17054.1	6722.75
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	MEVFFPK	MEVFFPK	1	MEVFFPK1	848435	729038	795948
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	MEVFFPK	MEVFFPK	2	MEVFFPK2	3.60569e+07	3.78616e+07	3.80247e+07
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	MEVFFPKFK	MEVFFPKFK	3	MEVFFPKFK3	8099.55	2850.85	7522.95
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	MEVLGLLK	MEVLGLLK	2	MEVLGLLK2	41099.5	33710.8	28844
P08689	P08689	SHBG_RAT	Shbg	Sex hormone-binding globulin	1	MEVLSTSLLR	MEVLSTSLLR	2	MEVLSTSLLR2	35511	29741	19631.2
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	MEVQEVESLGETYDFDSIMHYAR	MEVQEVESLGETYDFDSIMHYAR	3	MEVQEVESLGETYDFDSIMHYAR3	6647.39	7895.21	1814.34
Q642G4	Q642G4	PEX14_RAT	Pex14	Peroxisomal membrane protein PEX14	1	MEVQGEEEK	MEVQGEEEK	2	MEVQGEEEK2	41237.8	34188.6	23408.3
D4ADK9	D4ADK9	D4ADK9_RAT	AABR07065781.1	Igh protein-like	1	MEWIGHISYSGSTSYNPSLK	MEWIGHISYSGSTSYNPSLK	3	MEWIGHISYSGSTSYNPSLK3	12219.8	10932.1	6315.29
A0A8I6GKC8	A0A8I6GKC8	A0A8I6GKC8_RAT	ENSRNOG00000069444	Ig-like domain-containing protein	1	MEWMGYISNSGSTNYNPSLK	MEWMGYISNSGSTNYNPSLK	3	MEWMGYISNSGSTNYNPSLK3	1355.14	3792.01	
D4A0G9	D4A0G9	D4A0G9_RAT	Ercc6l	ERCC excision repair 6 like, spindle assembly checkpoint helicase	1	MEYENPIIR	MEYENPIIR	2	MEYENPIIR2	11556.8	11730.3	8155.86
P01946	P01946	HBA_RAT	Hba1	Hemoglobin subunit alpha-1/2	1	MFAAFPTTK	MFAAFPTTK	2	MFAAFPTTK2	2.46675e+06	2.52689e+06	2.35282e+06
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	MFAEEEAELTQESSPEK	MFAEEEAELTQESSPEK	2	MFAEEEAELTQESSPEK2	26434.9	31519.2	25706
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	MFAEEEAELTQESSPEK	MFAEEEAELTQESSPEK	3	MFAEEEAELTQESSPEK3	7558.92	12243.7	5293.51
A0A8I6A9R8	A0A8I6A9R8	A0A8I6A9R8_RAT	Cope	Coatomer subunit epsilon	1	MFAEYLASENR	MFAEYLASENR	2	MFAEYLASENR2	35278.2	19625.7	20163.5
A0A8I6A9R8	A0A8I6A9R8	A0A8I6A9R8_RAT	Cope	Coatomer subunit epsilon	1	MFAEYLASENRR	MFAEYLASENRR	2	MFAEYLASENRR2	2377.88	2364.28	
A0A8I6A9R8	A0A8I6A9R8	A0A8I6A9R8_RAT	Cope	Coatomer subunit epsilon	1	MFAEYLASENRR	MFAEYLASENRR	3	MFAEYLASENRR3	447210	421985	537503
A0A0G2K3D9	A0A0G2K3D9	A0A0G2K3D9_RAT	Tmem132b	Transmembrane protein 132B	1	MFAFPEAR	MFAFPEAR	2	MFAFPEAR2	12809.2	15773.3	14716
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	MFAIYDGFDGLANGQIK	MFAIYDGFDGLANGQIK	2	MFAIYDGFDGLANGQIK2	34300.8	37551.1	27772.9
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	MFAIYDGFDGLANGQIK	MFAIYDGFDGLANGQIK	3	MFAIYDGFDGLANGQIK3	7068.17	7484.44	9670.72
P86411	P86411	RGPA2_RAT	Ralgapa2	Ral GTPase-activating protein subunit alpha-2	1	MFASWLFK	MFASWLFK	2	MFASWLFK2			1515.47
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	MFATTLEEPTMLR	MFATTLEEPTMLR	2	MFATTLEEPTMLR2	15732.2	23097	21924.5
D3ZXJ5	D3ZXJ5	D3ZXJ5_RAT	Efl1	Elongation factor like GTPase 1	1	MFAVDVK	MFAVDVK	2	MFAVDVK2	8859.62	11763.8	7068.61
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	MFDKQHVLLFAVFDESK	MFDKQHVLLFAVFDESK	4	MFDKQHVLLFAVFDESK4	5291.52	7512.8	7369.23
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	MFDQQEIQVLISGAQVPVSLEDLK	MFDQQEIQVLISGAQVPVSLEDLK	3	MFDQQEIQVLISGAQVPVSLEDLK3	3307.43		
F1M3G7	F1M3G7	AKP13_RAT	Akap13	A-kinase anchor protein 13	1	MFDQQTCYR	MFDQQTC(UniMod:4)YR	2	MFDQQTC(UniMod:4)YR2	1434.54	2090.53	1465.62
D3ZCI9	D3ZCI9	D3ZCI9_RAT	Myl10	Myosin light chain 10	1	MFDQSQIQEFK	MFDQSQIQEFK	2	MFDQSQIQEFK2	4387.02	2417.1	2963.92
P04897	P10824;D4AA42;P04897;D3ZSS5;P08753;P29348	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	0	MFDVGGQR	MFDVGGQR	1	MFDVGGQR1	15249.7	13088.1	
P04897	P10824;D4AA42;P04897;D3ZSS5;P08753;P29348	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	0	MFDVGGQR	MFDVGGQR	2	MFDVGGQR2	2.76998e+06	2.71051e+06	2.92293e+06
Q641X8	Q641X8;A0A0G2K273	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	0	MFEDPETTR	MFEDPETTR	2	MFEDPETTR2	325786	385193	346347
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	MFEFQNFER	MFEFQNFER	2	MFEFQNFER2	22665.1	30659.8	39214.7
Q641Y2	Q641Y2	NDUS2_RAT	Ndufs2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	1	MFEFYER	MFEFYER	2	MFEFYER2	100192	81501.1	97008.9
A0A0G2JYA7	A0A0G2JYA7	A0A0G2JYA7_RAT	Tarbp1	TAR (HIV-1) RNA binding protein 1	1	MFEGENK	MFEGENK	2	MFEGENK2	4821.45	8094.46	
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	MFEHDFR	MFEHDFR	2	MFEHDFR2	4851.65	4256.69	7227.26
D4A3I5	D4A3I5	D4A3I5_RAT	Fhip2a	FHF complex subunit HOOK interacting protein 2A	1	MFEHLLQKPNEHILYNLVLR	MFEHLLQKPNEHILYNLVLR	4	MFEHLLQKPNEHILYNLVLR4	18413.6	9032.09	9033.24
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	MFELLVK	MFELLVK	2	MFELLVK2	9423.7	6681.82	
B1H274	B1H274	B1H274_RAT	Atg4a	Cysteine protease	1	MFELVQK	MFELVQK	2	MFELVQK2	26471.9	25298.7	15183.2
P12368	P12368	KAP2_RAT	Prkar2a	cAMP-dependent protein kinase type II-alpha regulatory subunit	1	MFESFIESVPLFK	MFESFIESVPLFK	2	MFESFIESVPLFK2	11348.7	10644.5	6858.05
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	MFESILK	MFESILK	2	MFESILK2	38915.2	37529.4	56727.2
Q62931	Q62931	GOSR1_RAT	Gosr1	Golgi SNAP receptor complex member 1	1	MFETMAIEIEQLLAR	MFETMAIEIEQLLAR	2	MFETMAIEIEQLLAR2	10461.4		
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	MFEWGHSQQITCFR	MFEWGHSQQITC(UniMod:4)FR	3	MFEWGHSQQITC(UniMod:4)FR3	9186.47	14066.7	5259.44
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	MFFDALYDEDVVK	MFFDALYDEDVVK	2	MFFDALYDEDVVK2	61844.5	57574.9	53945.5
Q5M808	Q5M808	HIKES_RAT	Hikeshi	Protein Hikeshi	1	MFGCLVAGR	MFGC(UniMod:4)LVAGR	2	MFGC(UniMod:4)LVAGR2	10515	8517.29	3842
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	MFGIDKDAIVQAVK	MFGIDKDAIVQAVK	2	MFGIDKDAIVQAVK2	10327.4	4187.02	5515.94
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	MFGIDKDAIVQAVK	MFGIDKDAIVQAVK	3	MFGIDKDAIVQAVK3	122324	93278.6	117527
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	MFGLMNSHAMLK	MFGLMNSHAMLK	3	MFGLMNSHAMLK3	4054.32	5590.18	3994.21
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	MFGMVLEK	MFGMVLEK	2	MFGMVLEK2	45821.1	28388.1	27831.9
P12368	P12368	KAP2_RAT	Prkar2a	cAMP-dependent protein kinase type II-alpha regulatory subunit	1	MFGSNLDLLDPGQ	MFGSNLDLLDPGQ	2	MFGSNLDLLDPGQ2	7172.61	8160.45	11901.3
A0A8I6A829	A0A8I6A829;A0A0G2K3H2	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	0	MFGTYFR	MFGTYFR	2	MFGTYFR2	213676	192719	220820
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	MFGVPVVVAMNAFK	MFGVPVVVAMNAFK	2	MFGVPVVVAMNAFK2	55184	60615.5	67956.6
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	MFGVPVVVAMNAFK	MFGVPVVVAMNAFK	3	MFGVPVVVAMNAFK3	1596.64	985.086	1330.61
O54857	O54857	PTEN_RAT	Pten	Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN	1	MFHFWVNTFFIPGPEETSEK	MFHFWVNTFFIPGPEETSEK	3	MFHFWVNTFFIPGPEETSEK3	13064.5	20165.6	10089.1
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	MFIFYGNK	MFIFYGNK	2	MFIFYGNK2	20735.2	27877.2	21430.2
Q3SWU3	Q3SWU3	HNRDL_RAT	Hnrnpdl	Heterogeneous nuclear ribonucleoprotein D-like	1	MFIGGLSWDTSK	MFIGGLSWDTSK	2	MFIGGLSWDTSK2	7573.89		3244.19
A0A8I6AQW7	A0A8I6AQW7	A0A8I6AQW7_RAT	Msi2	Musashi RNA-binding protein 2	1	MFIGGLSWQTSPDSLR	MFIGGLSWQTSPDSLR	2	MFIGGLSWQTSPDSLR2	9595.4	6010.65	4279.56
D3ZX38	D3ZX38	D3ZX38_RAT	Pfdn1	Prefoldin subunit 1	1	MFILQSK	MFILQSK	2	MFILQSK2	120775	101169	93565.8
A0A0G2JTG3	A0A0G2JTG3	A0A0G2JTG3_RAT	Susd1	Sushi domain containing 1	1	MFIPNDGTFCADVDECEDSGLCR	MFIPNDGTFC(UniMod:4)ADVDEC(UniMod:4)EDSGLC(UniMod:4)R	3	MFIPNDGTFC(UniMod:4)ADVDEC(UniMod:4)EDSGLC(UniMod:4)R3	1166.19	922.005	2312.12
Q5M936	Q5M936	TOR3A_RAT	Tor3a	Torsin-3A	1	MFISTFHFPHPK	MFISTFHFPHPK	3	MFISTFHFPHPK3	17218.2	13372.5	8166.11
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	MFLAYQDQSFDIPDR	MFLAYQDQSFDIPDR	2	MFLAYQDQSFDIPDR2	11103.5	7634.97	10690.4
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	MFLEAMPYK	MFLEAMPYK	2	MFLEAMPYK2	48422.3	58435.9	47323.5
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	MFLEAMPYKR	MFLEAMPYKR	3	MFLEAMPYKR3	15155.7	6365.51	7336.41
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	MFLENETWELCPVK	MFLENETWELC(UniMod:4)PVK	2	MFLENETWELC(UniMod:4)PVK2	2230.32	1185.58	7397.85
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	MFLGDNAHLSIINEYLSQSYQK	MFLGDNAHLSIINEYLSQSYQK	3	MFLGDNAHLSIINEYLSQSYQK3	3140.16	3842.52	1868.57
D3ZAI6	D3ZAI6	D3ZAI6_RAT	Nt5dc3	5'-nucleotidase domain containing 3	1	MFLITNSPSSFVDK	MFLITNSPSSFVDK	2	MFLITNSPSSFVDK2	31041.1	29501.9	39197.8
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	MFLMMHPWYIPSSQLASK	MFLMMHPWYIPSSQLASK	3	MFLMMHPWYIPSSQLASK3	526626	516321	563542
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	MFLNLLSPR	MFLNLLSPR	2	MFLNLLSPR2	125990	128543	108778
Q9Z2Q4	Q9Z2Q4	METH_RAT	Mtr	Methionine synthase	1	MFLPQVIK	MFLPQVIK	2	MFLPQVIK2	1710.94	4434.2	2652.01
A0A0G2JZA7	A0A0G2JZA7	A0A0G2JZA7_RAT	Cemip2	hyaluronoglucosaminidase	1	MFLSADISHLEEYLK	MFLSADISHLEEYLK	3	MFLSADISHLEEYLK3	4236.17	5341.88	
O08775	O08775	VGFR2_RAT	Kdr	Vascular endothelial growth factor receptor 2	1	MFLSTLTIDSVTK	MFLSTLTIDSVTK	2	MFLSTLTIDSVTK2	13256.6	14310	16011.5
Q5FVF9	Q5FVF9	BTD_RAT	Btd	Biotinidase	1	MFLVANLGTK	MFLVANLGTK	2	MFLVANLGTK2	276233	178069	175080
A0A8I6A5Y0	A0A8I6A5Y0	A0A8I6A5Y0_RAT	Vta1	Vesicle trafficking 1	1	MFLYADNEDR	MFLYADNEDR	2	MFLYADNEDR2	22786.2	18239	11932.2
E9PT66	E9PT66	E9PT66_RAT	Sf3b3	Splicing factor 3b, subunit 3	1	MFLYNLTLQR	MFLYNLTLQR	2	MFLYNLTLQR2	8507.38	4766.86	6545.73
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	MFMSELSGNIIDICPVGALTSK	MFMSELSGNIIDIC(UniMod:4)PVGALTSK	3	MFMSELSGNIIDIC(UniMod:4)PVGALTSK3	3402.14	2351.28	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	MFNALIHR	MFNALIHR	2	MFNALIHR2	9603.3	6859.08	3875.98
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	MFNIISDSPSPIAAR	MFNIISDSPSPIAAR	2	MFNIISDSPSPIAAR2	23602.1	20124.3	26793.8
G3V8V4	G3V8V4	G3V8V4_RAT	Cers2	Ceramide synthase 2	1	MFNYAGWK	MFNYAGWK	2	MFNYAGWK2	52870.6	52935	48908
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	MFPFIMEGTK	MFPFIMEGTK	2	MFPFIMEGTK2	51531.9	90219.9	76557.9
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	MFQDIGVSK	MFQDIGVSK	2	MFQDIGVSK2	191606	200559	189269
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	MFQIQFHTGFVPR	MFQIQFHTGFVPR	3	MFQIQFHTGFVPR3	11215.4	19038	9698.94
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	MFQLSQAK	MFQLSQAK	2	MFQLSQAK2	44492.4	39837.8	34442.1
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	MFQMFESSHK	MFQMFESSHK	2	MFQMFESSHK2	31125.4	22617.9	16386.7
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	MFQMFESSHK	MFQMFESSHK	3	MFQMFESSHK3	116039	129077	123725
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	MFQQCLELPSQSR	MFQQC(UniMod:4)LELPSQSR	2	MFQQC(UniMod:4)LELPSQSR2	54429.6	71912.2	66176.5
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	MFQQCLELPSQSR	MFQQC(UniMod:4)LELPSQSR	3	MFQQC(UniMod:4)LELPSQSR3	35407.8	43756.3	59365.3
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	MFSEADACELWIDEK	MFSEADAC(UniMod:4)ELWIDEK	2	MFSEADAC(UniMod:4)ELWIDEK2	17402	13759.7	25231.3
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	MFSEADACELWIDEKEQWLNNMQIPEK	MFSEADAC(UniMod:4)ELWIDEKEQWLNNMQIPEK	4	MFSEADAC(UniMod:4)ELWIDEKEQWLNNMQIPEK4	48914	43737	63580.4
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	MFSGTPVIR	MFSGTPVIR	2	MFSGTPVIR2	193616	254801	197478
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	MFTDLNLVQNFQMK	MFTDLNLVQNFQMK	2	MFTDLNLVQNFQMK2	153448	132392	145390
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	MFTDLNLVQNFQMK	MFTDLNLVQNFQMK	3	MFTDLNLVQNFQMK3	28694.4	19662.2	22112.5
Q64244	Q64244	CD38_RAT	Cd38	ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1	1	MFTLEDTLLGYIADDLR	MFTLEDTLLGYIADDLR	3	MFTLEDTLLGYIADDLR3	1823.64		
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	MFTLLDVVNR	MFTLLDVVNR	2	MFTLLDVVNR2	60683.2	63972.2	74638.6
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	MFTLLDVVNRK	MFTLLDVVNRK	2	MFTLLDVVNRK2	1408.59	4891.27	8890.56
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	MFTLLDVVNRK	MFTLLDVVNRK	3	MFTLLDVVNRK3	54634.9	76697.7	62344.9
A0A8I5Y7I2	A0A8I5Y7I2	A0A8I5Y7I2_RAT	Kctd12	Potassium channel tetramerization domain containing 12	1	MFTQQQPQELAR	MFTQQQPQELAR	2	MFTQQQPQELAR2	330267	282218	348628
A0A8I5Y7I2	A0A8I5Y7I2	A0A8I5Y7I2_RAT	Kctd12	Potassium channel tetramerization domain containing 12	1	MFTQQQPQELAR	MFTQQQPQELAR	3	MFTQQQPQELAR3	7603.82	12541.1	11024.3
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	MFTTAPENVDK	MFTTAPENVDK	2	MFTTAPENVDK2	192845	116624	113500
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	MFTTAPENVDKEDEDFQESNK	MFTTAPENVDKEDEDFQESNK	3	MFTTAPENVDKEDEDFQESNK3	3.40544e+06	2.1837e+06	2.22263e+06
P82471	Q9JID2;P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	0	MFVDLNPDSDK	MFVDLNPDSDK	2	MFVDLNPDSDK2	107262	117653	127654
P82471	Q9JID2;P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	0	MFVDLNPDSDKIIYSHFTCATDTENIR	MFVDLNPDSDKIIYSHFTC(UniMod:4)ATDTENIR	4	MFVDLNPDSDKIIYSHFTC(UniMod:4)ATDTENIR4			11474.1
Q792H5	Q792H5	CELF2_RAT	Celf2	CUGBP Elav-like family member 2	1	MFVGQIPR	MFVGQIPR	2	MFVGQIPR2	37758.1	27578	32247.3
Q4QQT3	Q4QQT3	CELF1_RAT	Celf1	CUGBP Elav-like family member 1	1	MFVGQVPR	MFVGQVPR	2	MFVGQVPR2	22436.1	16937.2	15757.6
Q5RKI1	Q5RKI1;A0A8I6GF11;Q6P3V8	IF4A2_RAT	Eif4a2	Eukaryotic initiation factor 4A-II	0	MFVLDEADEMLSR	MFVLDEADEMLSR	2	MFVLDEADEMLSR2	93164.4	62958.7	82149
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	MFVLNELVQTEK	MFVLNELVQTEK	2	MFVLNELVQTEK2	250270	284387	318073
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	MFVLNELVQTEKDYVK	MFVLNELVQTEKDYVK	2	MFVLNELVQTEKDYVK2	4785.83	3481.83	
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	MFVLNELVQTEKDYVK	MFVLNELVQTEKDYVK	3	MFVLNELVQTEKDYVK3	37706.1	48104	32999.8
Q9Z1Y3	Q9Z1Y3	CADH2_RAT	Cdh2	Cadherin-2	1	MFVLTVAAENQVPLAK	MFVLTVAAENQVPLAK	2	MFVLTVAAENQVPLAK2	9644.66	13672.4	6630.51
Q9Z1Y3	Q9Z1Y3	CADH2_RAT	Cdh2	Cadherin-2	1	MFVLTVAAENQVPLAK	MFVLTVAAENQVPLAK	3	MFVLTVAAENQVPLAK3	7825.47	7151.63	7400.99
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	MFVNNEHDLQVCK	MFVNNEHDLQVC(UniMod:4)K	2	MFVNNEHDLQVC(UniMod:4)K2	4810.89	4424.6	1731.41
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	MFVNNEHDLQVCK	MFVNNEHDLQVC(UniMod:4)K	3	MFVNNEHDLQVC(UniMod:4)K3	123276	162653	122559
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	MFVVAEAEAGACR	MFVVAEAEAGAC(UniMod:4)R	2	MFVVAEAEAGAC(UniMod:4)R2	153147	156391	138429
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	MFVVAEAEAGACR	MFVVAEAEAGAC(UniMod:4)R	3	MFVVAEAEAGAC(UniMod:4)R3	56558.1	66905.8	68569.8
P52632	P52632	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	1	MFWNLMPFTTR	MFWNLMPFTTR	2	MFWNLMPFTTR2	12013.7	13140	16553.8
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	MFYEFMLNNVNSWDR	MFYEFMLNNVNSWDR	3	MFYEFMLNNVNSWDR3	44892.5	43737.1	38537.9
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	MFYEFMLNNVNSWDRK	MFYEFMLNNVNSWDRK	3	MFYEFMLNNVNSWDRK3	36062.7	49072.3	49398
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	MFYGSFHK	MFYGSFHK	2	MFYGSFHK2		16527.5	8742.38
D3ZHR2	D3ZHR2	ABCD1_RAT	Abcd1	ATP-binding cassette sub-family D member 1	1	MFYIPQRPYMSVGSLR	MFYIPQRPYMSVGSLR	3	MFYIPQRPYMSVGSLR3	26716.2	31552.8	42581.5
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	MFYSSTGAPISVMFLTPGVTPWK	MFYSSTGAPISVMFLTPGVTPWK	3	MFYSSTGAPISVMFLTPGVTPWK3	24312.5	25850.9	28437.6
Q99JD4	Q99JD4;F1LNQ9	CLAP2_RAT	Clasp2	CLIP-associating protein 2	0	MGADLLGSVQAK	MGADLLGSVQAK	2	MGADLLGSVQAK2	12069.2	11617.2	8655.01
Q62826	Q62826	HNRPM_RAT	Hnrnpm	Heterogeneous nuclear ribonucleoprotein M	1	MGAGMGFGLER	MGAGMGFGLER	2	MGAGMGFGLER2	2014.13		
O88618	O88618	FTCD_RAT	Ftcd	Formimidoyltransferase-cyclodeaminase	1	MGALDVCPFIPVR	MGALDVC(UniMod:4)PFIPVR	2	MGALDVC(UniMod:4)PFIPVR2	7380.93	6771.04	4276.38
A0A8I6A427	A0A8I6A427;A0A0G2K999	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	0	MGALLQR	MGALLQR	2	MGALLQR2	11237.6	14625	19118.2
P55053	P55053	FABP5_RAT	Fabp5	Fatty acid-binding protein 5	1	MGAMAKPDCIITLDGNNLTVK	MGAMAKPDC(UniMod:4)IITLDGNNLTVK	3	MGAMAKPDC(UniMod:4)IITLDGNNLTVK3	8239.4	6366.68	8868.15
P19132	A0A8I5ZU81;P19132	FRIH_RAT	Fth1	Ferritin heavy chain	0	MGAPESGMAEYLFDK	MGAPESGMAEYLFDK	2	MGAPESGMAEYLFDK2	13947.4	10547.2	17496.1
D3Z8I2	D3Z8I2	D3Z8I2_RAT	Susd3	Sushi domain containing 3	1	MGAPSPGGSSNSPR	MGAPSPGGSSNSPR	2	MGAPSPGGSSNSPR2	17774	6984.64	19854.3
D4AB01	D4AB01	D4AB01_RAT	Hint2	Histidine triad nucleotide binding protein 2	1	MGAQSVYHLHIHVLGGR	MGAQSVYHLHIHVLGGR	4	MGAQSVYHLHIHVLGGR4	6379.29	13090	4225.51
P29266	P29266	3HIDH_RAT	Hibadh	3-hydroxyisobutyrate dehydrogenase, mitochondrial	1	MGAVFMDAPVSGGVGAAR	MGAVFMDAPVSGGVGAAR	2	MGAVFMDAPVSGGVGAAR2	72917.6	76355.4	83243.1
P29266	P29266	3HIDH_RAT	Hibadh	3-hydroxyisobutyrate dehydrogenase, mitochondrial	1	MGAVFMDAPVSGGVGAAR	MGAVFMDAPVSGGVGAAR	3	MGAVFMDAPVSGGVGAAR3	5890.46	7627.71	8194.32
Q5XIP1	Q5XIP1	PELO_RAT	Pelo	Protein pelota homolog	1	MGAYHTIELEPNR	MGAYHTIELEPNR	2	MGAYHTIELEPNR2	3700.4	3601.55	4320.24
Q5XIP1	Q5XIP1	PELO_RAT	Pelo	Protein pelota homolog	1	MGAYHTIELEPNR	MGAYHTIELEPNR	3	MGAYHTIELEPNR3	57052.5	48081.4	34129.6
Q02769	Q02769	FDFT_RAT	Fdft1	Squalene synthase	1	MGCGMAEFLNK	MGC(UniMod:4)GMAEFLNK	2	MGC(UniMod:4)GMAEFLNK2	2135.68		3012.09
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	MGCPPGCPR	MGC(UniMod:4)PPGC(UniMod:4)PR	2	MGC(UniMod:4)PPGC(UniMod:4)PR2	78078	63096.3	45823.1
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	MGCQATQLTSR	MGC(UniMod:4)QATQLTSR	2	MGC(UniMod:4)QATQLTSR2	2901.97	1728.69	4133.18
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	MGDADAGFELLPHEEEAQGR	MGDADAGFELLPHEEEAQGR	3	MGDADAGFELLPHEEEAQGR3	20690.5	17524.9	18009.5
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	MGDADYLATWHR	MGDADYLATWHR	2	MGDADYLATWHR2	7557.81		
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	MGDADYLATWHR	MGDADYLATWHR	3	MGDADYLATWHR3	42844.6	45326.8	39403.9
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	MGDEGGESELLGEDLPLEPSVTK	MGDEGGESELLGEDLPLEPSVTK	3	MGDEGGESELLGEDLPLEPSVTK3	13939.8	7830.74	11357.9
D4ADD8	D4ADD8	D4ADD8_RAT	Dctn6	Dynactin subunit 6	1	MGDNNVIESK	MGDNNVIESK	2	MGDNNVIESK2	33757.6	29334.4	21382.6
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	MGDSSQGDNNVQK	MGDSSQGDNNVQK	2	MGDSSQGDNNVQK2			1784.43
O88775	O88775	EMB_RAT	Emb	Embigin	1	MGDTLYSQYR	MGDTLYSQYR	2	MGDTLYSQYR2	25860.7	28863.8	33435.8
P01015	P01015	ANGT_RAT	Agt	Angiotensinogen	1	MGDTNPR	MGDTNPR	2	MGDTNPR2			53910.2
D4ACF2	D4ACF2	D4ACF2_RAT	Trim21	RING-type E3 ubiquitin transferase	1	MGDTYQNVSENAER	MGDTYQNVSENAER	2	MGDTYQNVSENAER2	3695.98	2759.52	
A0A8I6GFC7	A0A8I6GFC7	A0A8I6GFC7_RAT	Ubp1	Upstream binding protein 1	1	MGDVPEISGK	MGDVPEISGK	2	MGDVPEISGK2	12462.7	13603.7	8938.46
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	MGEDMHTIGFGIYEVPEELTGQTNIHLSK	MGEDMHTIGFGIYEVPEELTGQTNIHLSK	4	MGEDMHTIGFGIYEVPEELTGQTNIHLSK4	888968	802539	730989
Q499N5	Q499N5	ACSF2_RAT	Acsf2	Medium-chain acyl-CoA ligase ACSF2, mitochondrial	1	MGEEICACIR	MGEEIC(UniMod:4)AC(UniMod:4)IR	2	MGEEIC(UniMod:4)AC(UniMod:4)IR2		3052	
Q9QWG5	Q9QWG5	INP4B_RAT	Inpp4b	Type II inositol 3,4-bisphosphate 4-phosphatase	1	MGEIEDGDTDHITTDVQGQK	MGEIEDGDTDHITTDVQGQK	3	MGEIEDGDTDHITTDVQGQK3	2253.26	4393.19	3687.35
E9PU34	E9PU34	E9PU34_RAT	Rmnd1	Required for meiotic nuclear division 1 homolog	1	MGELFALR	MGELFALR	2	MGELFALR2	8825.64	7863.26	6878.92
Q925N6	Q925N6	IGSF1_RAT	Igsf1	Immunoglobulin superfamily member 1	1	MGEQEPVQQLGAVGR	MGEQEPVQQLGAVGR	2	MGEQEPVQQLGAVGR2	25920.3	15870.7	9402.63
P05765	P05765;D3ZSE0;A0A8I6A7I3	RS21_RAT	Rps21	Small ribosomal subunit protein eS21	0	MGESDDSILR	MGESDDSILR	2	MGESDDSILR2	23816.8	36440.8	38648.3
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	MGEVAGGAAPGPPR	MGEVAGGAAPGPPR	3	MGEVAGGAAPGPPR3		3421.39	
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	MGFAVLLVNYR	MGFAVLLVNYR	2	MGFAVLLVNYR2	25328.7	31108.9	17706.5
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	MGFDMNNAWR	MGFDMNNAWR	2	MGFDMNNAWR2	18909.4	28507.9	28182.1
A0A0G2K736	A0A0G2K736	A0A0G2K736_RAT	Kdm1a	Lysine-specific histone demethylase	1	MGFGNLNK	MGFGNLNK	2	MGFGNLNK2	60181.2	25340	39415.8
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	MGFGNLVTLDFPK	MGFGNLVTLDFPK	2	MGFGNLVTLDFPK2	51023	53759.8	39028
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	MGFGNLVTLDFPKEDYR	MGFGNLVTLDFPKEDYR	3	MGFGNLVTLDFPKEDYR3	39369.3	59757.3	57776.3
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	MGFGPDPTFSSCVPDPPMISEEK	MGFGPDPTFSSC(UniMod:4)VPDPPMISEEK	3	MGFGPDPTFSSC(UniMod:4)VPDPPMISEEK3	71585.1	60377.5	74194.8
B2RYK9	B2RYK9	B2RYK9_RAT	Dmkn	Dermokine	1	MGFINWDAINK	MGFINWDAINK	2	MGFINWDAINK2	42035.4	28806.6	38689.1
D3ZYI0	D3ZYI0	D3ZYI0_RAT	Gca	Grancalcin	1	MGFNEFK	MGFNEFK	2	MGFNEFK2	8773.59		
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	MGFPSNIVDSAAENMIK	MGFPSNIVDSAAENMIK	2	MGFPSNIVDSAAENMIK2		7117.46	5766.32
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	MGFPSNIVDSAAENMIK	MGFPSNIVDSAAENMIK	3	MGFPSNIVDSAAENMIK3	10935.6	15533.1	11337.2
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	MGFTILR	MGFTILR	2	MGFTILR2	90058.7	92645.9	103567
D4A7H9	D4A7H9	D4A7H9_RAT	Chmp7	Charged multivesicular body protein 7	1	MGFWAPLVLSHSR	MGFWAPLVLSHSR	3	MGFWAPLVLSHSR3	12128.6	5414.8	12255
F1LQ09	F1LQ09	F1LQ09_RAT	Atl2	Atlastin GTPase 2	1	MGGDEFCR	MGGDEFC(UniMod:4)R	2	MGGDEFC(UniMod:4)R2	56260.3	61054.2	49397.7
Q6AYD3	Q6AYD3	PA2G4_RAT	Pa2g4	Proliferation-associated protein 2G4	1	MGGDIANR	MGGDIANR	2	MGGDIANR2	80284.3	56220.9	59229
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	MGGMVSFR	MGGMVSFR	2	MGGMVSFR2	10551.8	20426.4	5191.24
A0A0G2JSI4	A0A0G2JSI4	A0A0G2JSI4_RAT	Adgre5	Adhesion G protein-coupled receptor E5	1	MGGYSCICR	MGGYSC(UniMod:4)IC(UniMod:4)R	2	MGGYSC(UniMod:4)IC(UniMod:4)R2	144441	137721	151051
P13086	P13086	SUCA_RAT	Suclg1	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial	1	MGHAGAIIAGGK	MGHAGAIIAGGK	2	MGHAGAIIAGGK2	15791.6	20138.1	24376.4
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	MGHLTCFAGGMFALGADGAPEAR	MGHLTC(UniMod:4)FAGGMFALGADGAPEAR	3	MGHLTC(UniMod:4)FAGGMFALGADGAPEAR3	16648.4	14242.5	16757.9
Q5GF25	Q5GF25	MANEA_RAT	Manea	Glycoprotein endo-alpha-1,2-mannosidase	1	MGHSLPMFYIYDSYITKPK	MGHSLPMFYIYDSYITKPK	4	MGHSLPMFYIYDSYITKPK4	2229.1	5158.09	3312.47
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	MGIAEYNK	MGIAEYNK	2	MGIAEYNK2	51380.2	52520.7	53217.7
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	MGIASIEEETQAVMK	MGIASIEEETQAVMK	2	MGIASIEEETQAVMK2	6471.17	9081.96	8087.87
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	MGIEILSFTIK	MGIEILSFTIK	2	MGIEILSFTIK2	8717.29	6022.63	5756.27
D3ZAN4	D3ZAN4	D3ZAN4_RAT	Slc35b4	Solute carrier family 35 member B4	1	MGIFQETLYR	MGIFQETLYR	2	MGIFQETLYR2	31040.1	19695.4	15962.1
A0A0G2QC33	A0A0G2QC33	ATG4B_RAT	Atg4b	Cysteine protease ATG4B	1	MGIGELDPSIAVGFFCK	MGIGELDPSIAVGFFC(UniMod:4)K	2	MGIGELDPSIAVGFFC(UniMod:4)K2	50124.1	47784.2	47148.3
A0A0G2QC33	A0A0G2QC33	ATG4B_RAT	Atg4b	Cysteine protease ATG4B	1	MGIGELDPSIAVGFFCK	MGIGELDPSIAVGFFC(UniMod:4)K	3	MGIGELDPSIAVGFFC(UniMod:4)K3	2223.35	4551.84	2123.58
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	MGIGGLDK	MGIGGLDK	2	MGIGGLDK2	28937.3	22192.9	18994.8
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	MGIGGLDKEFSDIFR	MGIGGLDKEFSDIFR	3	MGIGGLDKEFSDIFR3	45125.5	43197.7	29520.7
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	MGIGGLDKEFSDIFRR	MGIGGLDKEFSDIFRR	4	MGIGGLDKEFSDIFRR4			8557.64
P30427	P30427	PLEC_RAT	Plec	Plectin	1	MGIVGPEFK	MGIVGPEFK	2	MGIVGPEFK2	9794.06	6264.8	9577.27
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	MGIYILDPSWEIR	MGIYILDPSWEIR	2	MGIYILDPSWEIR2	61682.7	102451	87057.1
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	MGIYTGAK	MGIYTGAK	2	MGIYTGAK2	197962	224896	248637
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	MGIYVGAK	MGIYVGAK	2	MGIYVGAK2	21883	15077	21578.6
O70593	O70593	SGTA_RAT	Sgta	Small glutamine-rich tetratricopeptide repeat-containing protein alpha	1	MGLALSSLNK	MGLALSSLNK	2	MGLALSSLNK2	303857	219923	263320
Q08420	Q08420	SODE_RAT	Sod3	Extracellular superoxide dismutase [Cu-Zn]	1	MGLATSLAGPHSILGR	MGLATSLAGPHSILGR	2	MGLATSLAGPHSILGR2	11702.8	11835.4	14739.8
Q08420	Q08420	SODE_RAT	Sod3	Extracellular superoxide dismutase [Cu-Zn]	1	MGLATSLAGPHSILGR	MGLATSLAGPHSILGR	3	MGLATSLAGPHSILGR3	197399	168159	183235
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	MGLDGLQQDYIR	MGLDGLQQDYIR	2	MGLDGLQQDYIR2	84352	83537.3	84119.2
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	MGLGHEQGFGAPCLK	MGLGHEQGFGAPC(UniMod:4)LK	2	MGLGHEQGFGAPC(UniMod:4)LK2	10536.2	10026.9	
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	MGLGHEQGFGAPCLK	MGLGHEQGFGAPC(UniMod:4)LK	3	MGLGHEQGFGAPC(UniMod:4)LK3	254148	234450	265313
B1WBY5	B1WBY5	B1WBY5_RAT	Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	1	MGLIIVNAWYGK	MGLIIVNAWYGK	2	MGLIIVNAWYGK2	15086.6	19549	16563.2
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	MGLIQTADQLR	MGLIQTADQLR	2	MGLIQTADQLR2	149915	160749	141679
B2RYN0	B2RYN0	B2RYN0_RAT	Pgm3	Phosphoacetylglucosamine mutase	1	MGLLAVLR	MGLLAVLR	2	MGLLAVLR2	13455.5	8507.39	13563.6
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	MGLPDNYWQLSDVNR	MGLPDNYWQLSDVNR	2	MGLPDNYWQLSDVNR2	28549.9	29925.4	39914.8
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	MGLPDNYWQLSDVNR	MGLPDNYWQLSDVNR	3	MGLPDNYWQLSDVNR3	7738.35	20997	11646.2
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	MGLQTSDIK	MGLQTSDIK	2	MGLQTSDIK2	12372.1	18380.1	14156.7
D3ZUL5	D3ZUL5	D3ZUL5_RAT	Myct1	Myc target 1	1	MGLSTPPPPAYESIIK	MGLSTPPPPAYESIIK	2	MGLSTPPPPAYESIIK2	334747	384576	342686
D3ZUL5	D3ZUL5	D3ZUL5_RAT	Myct1	Myc target 1	1	MGLSTPPPPAYESIIK	MGLSTPPPPAYESIIK	3	MGLSTPPPPAYESIIK3	23597.8	24440.9	30657.6
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	MGLVDQLVDPLGPGIK	MGLVDQLVDPLGPGIK	2	MGLVDQLVDPLGPGIK2	92394.7	87701.4	98718.4
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	MGLVDQLVDPLGPGIK	MGLVDQLVDPLGPGIK	3	MGLVDQLVDPLGPGIK3	24781.1	26486.2	24512.9
F1LU71	F1LU71	AUHM_RAT	Auh	Methylglutaconyl-CoA hydratase, mitochondrial	1	MGLVETK	MGLVETK	2	MGLVETK2	279569	244828	300493
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	MGMEDAFNK	MGMEDAFNK	2	MGMEDAFNK2	77301.3	79463.7	98866.7
Q5PQJ6	Q5PQJ6	P5CR3_RAT	Pycr3	Pyrroline-5-carboxylate reductase 3	1	MGMPSDLAHR	MGMPSDLAHR	2	MGMPSDLAHR2	16452.3	3707.48	
B1WC91	B1WC91	B1WC91_RAT	C1qtnf3	C1q and TNF related 3	1	MGNGALHGDHQR	MGNGALHGDHQR	2	MGNGALHGDHQR2			151755
B1WC91	B1WC91	B1WC91_RAT	C1qtnf3	C1q and TNF related 3	1	MGNGALHGDHQR	MGNGALHGDHQR	3	MGNGALHGDHQR3			243473
B1WC91	B1WC91	B1WC91_RAT	C1qtnf3	C1q and TNF related 3	1	MGNGALHGDHQRFSTFAGFLLFETK	MGNGALHGDHQRFSTFAGFLLFETK	4	MGNGALHGDHQRFSTFAGFLLFETK4	5267.84	12528.5	6981.66
Q7TP54	P02793;A0A8I6GIG4;D4ADM5;A0A8I5ZY31;M0RCS3;M0R597;M0R5T8;Q7TP54;F1M5T1;M0R6L9;A0A8L2QVZ0	RIPR2_RAT	Ripor2	Rho family-interacting cell polarization regulator 2	0	MGNHLTNLR	MGNHLTNLR	2	MGNHLTNLR2	3371.44		1494.93
D3ZZL3	D3ZZL3	D3ZZL3_RAT	Naglu	N-acetyl-alpha-glucosaminidase	1	MGNLHTWDGPLPR	MGNLHTWDGPLPR	2	MGNLHTWDGPLPR2	2346.46		
D3ZZL3	D3ZZL3	D3ZZL3_RAT	Naglu	N-acetyl-alpha-glucosaminidase	1	MGNLHTWDGPLPR	MGNLHTWDGPLPR	3	MGNLHTWDGPLPR3	30011.5	30348.9	38502.4
E9PU02	E9PU02	E9PU02_RAT	Trappc9	Trafficking protein particle complex subunit 9	1	MGNPALSVR	MGNPALSVR	2	MGNPALSVR2	16119.3	14521.8	7203.5
M0R6S5	M0R6S5	M0R6S5_RAT	Chsy3	Hexosyltransferase	1	MGNSPTEGDFVFSK	MGNSPTEGDFVFSK	2	MGNSPTEGDFVFSK2		1598.68	
Q4V8H8	Q4V8H8	EHD2_RAT	Ehd2	EH domain-containing protein 2	1	MGPFVER	MGPFVER	2	MGPFVER2	6154.13	9519.35	7189.7
P10536	P10536	RAB1B_RAT	Rab1b	Ras-related protein Rab-1B	1	MGPGAASGGER	MGPGAASGGER	2	MGPGAASGGER2	24693	16747.8	12279
P10536	P10536	RAB1B_RAT	Rab1b	Ras-related protein Rab-1B	1	MGPGAASGGERPNLK	MGPGAASGGERPNLK	2	MGPGAASGGERPNLK2	79961.4	49025.8	38146
P10536	P10536	RAB1B_RAT	Rab1b	Ras-related protein Rab-1B	1	MGPGAASGGERPNLK	MGPGAASGGERPNLK	3	MGPGAASGGERPNLK3	2.41499e+06	2.32643e+06	2.40984e+06
Q6NYB7	Q6NYB7;A0A8I6AT03	RAB1A_RAT	Rab1A	Ras-related protein Rab-1A	0	MGPGATAGGAEK	MGPGATAGGAEK	2	MGPGATAGGAEK2	264044	181620	259364
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	MGPGFTK	MGPGFTK	1	MGPGFTK1	19100.4	11520.3	15402.7
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	MGPLINAPHLER	MGPLINAPHLER	2	MGPLINAPHLER2	7533.18	3554.83	3457.8
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	MGPLINAPHLER	MGPLINAPHLER	3	MGPLINAPHLER3	125123	112216	89095.7
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	MGPNLQLIEGDAK	MGPNLQLIEGDAK	2	MGPNLQLIEGDAK2	24558.4	28745.6	22458.3
Q99MZ8	Q99MZ8	LASP1_RAT	Lasp1	LIM and SH3 domain protein 1	1	MGPSGGEGIEPER	MGPSGGEGIEPER	2	MGPSGGEGIEPER2	42296.5	12014.3	22686.3
Q99MZ8	Q99MZ8	LASP1_RAT	Lasp1	LIM and SH3 domain protein 1	1	MGPSGGEGIEPERR	MGPSGGEGIEPERR	3	MGPSGGEGIEPERR3	300586	266018	161466
A0A8I6AU59	A0A8I6AU59	A0A8I6AU59_RAT	Hacd4	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase	1	MGPSVLPAWLQPR	MGPSVLPAWLQPR	2	MGPSVLPAWLQPR2	44146.2	58615.2	43394.1
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	MGPYPQR	MGPYPQR	2	MGPYPQR2	1.54287e+06	1.67516e+06	1.49588e+06
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	MGPYPQRK	MGPYPQRK	2	MGPYPQRK2		13530.8	
O70248	O70248	APBA3_RAT	Apba3	Amyloid-beta A4 precursor protein-binding family A member 3	1	MGQAQEAMDR	MGQAQEAMDR	2	MGQAQEAMDR2	1628.76	4141.62	7458.05
Q5FWU0	Q5FWU0	Q5FWU0_RAT	Wasf2	Wiskott-Aldrich syndrome protein family member	1	MGQEFVESK	MGQEFVESK	2	MGQEFVESK2	133567	147707	150409
D3ZP82	D3ZP82	D3ZP82_RAT	Loxl3	Lysyl oxidase homolog	1	MGQGMGAIHLSEVR	MGQGMGAIHLSEVR	3	MGQGMGAIHLSEVR3	4926.75	3480.05	5455.17
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	MGQLTTSGAMLANVFQR	MGQLTTSGAMLANVFQR	2	MGQLTTSGAMLANVFQR2	11276.6	15067.1	19713.3
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	MGQLTTSGAMLANVFQR	MGQLTTSGAMLANVFQR	3	MGQLTTSGAMLANVFQR3	9964.14	17768.7	7690.08
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	MGQNLNR	MGQNLNR	2	MGQNLNR2		1.37594e+06	
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	MGQNPDETDETTELNS	MGQNPDETDETTELNS	2	MGQNPDETDETTELNS2	30918.2	35961.9	22084.4
A0A8I6ATU9	A0A8I6ATU9	A0A8I6ATU9_RAT	Atxn2	Ataxin 2	1	MGQPGPGSMPSR	MGQPGPGSMPSR	2	MGQPGPGSMPSR2	13275	10847.6	11273.9
Q02353	Q02353	NDST1_RAT	Ndst1	Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1	1	MGQTLPTWLR	MGQTLPTWLR	2	MGQTLPTWLR2		13137.8	9790.23
P05714	P05714	RAB4A_RAT	Rab4a	Ras-related protein Rab-4A	1	MGSGIQYGDAALR	MGSGIQYGDAALR	2	MGSGIQYGDAALR2	10896.7	8933.49	12829.4
P51146	P51146	RAB4B_RAT	Rab4b	Ras-related protein Rab-4B	1	MGSGIQYGDISLR	MGSGIQYGDISLR	2	MGSGIQYGDISLR2	45983.8	57448	67244.6
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	MGSGTPYVGFHGGLWR	MGSGTPYVGFHGGLWR	3	MGSGTPYVGFHGGLWR3	3402.54	11286.9	9474.27
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	MGSIFDR	MGSIFDR	2	MGSIFDR2	25617.7	18099.8	36018.1
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	MGSIFDREDQTSSR	MGSIFDREDQTSSR	2	MGSIFDREDQTSSR2	2168.79		2144.42
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	MGSIFDREDQTSSR	MGSIFDREDQTSSR	3	MGSIFDREDQTSSR3	96551.6	122552	129558
A0A0G2K6R0	A0A0G2K6R0	A0A0G2K6R0_RAT	Tnrc6b	Trinucleotide repeat containing adaptor 6B	1	MGSPAPLLPGDLLGGGSDSI	MGSPAPLLPGDLLGGGSDSI	2	MGSPAPLLPGDLLGGGSDSI2		2021.2	1938.68
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	MGSQVIIPYR	MGSQVIIPYR	2	MGSQVIIPYR2	54554.4	73861.3	64075.2
D3ZMA2	D3ZMA2	D3ZMA2_RAT	Mtmr14	Myotubularin related protein 14	1	MGSSPLEVPKPR	MGSSPLEVPKPR	3	MGSSPLEVPKPR3	60622	65032.7	53981.9
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	MGSVALYTCDPGFSLSVLSHMR	MGSVALYTC(UniMod:4)DPGFSLSVLSHMR	3	MGSVALYTC(UniMod:4)DPGFSLSVLSHMR3	19190.8	16290.3	8017.13
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	MGSVSLIPLR	MGSVSLIPLR	2	MGSVSLIPLR2	123826	133581	113036
Q66HC1	Q66HC1	TDRD3_RAT	Tdrd3	Tudor domain-containing protein 3	1	MGTLNMEEPR	MGTLNMEEPR	2	MGTLNMEEPR2	2766.06	4056.82	
P39052	P39052;Q08877	DYN2_RAT	Dnm2	Dynamin-2	0	MGTPHLQK	MGTPHLQK	2	MGTPHLQK2		11513	14989.5
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	MGTVEWFHLMQQHHQPMVQGILEAGK	MGTVEWFHLMQQHHQPMVQGILEAGK	4	MGTVEWFHLMQQHHQPMVQGILEAGK4	11125.8	9460.99	5884.71
Q4QQS6	Q4QQS6	Q4QQS6_RAT	Alg5	dolichyl-phosphate beta-glucosyltransferase	1	MGVFSSR	MGVFSSR	2	MGVFSSR2	35293.7	32379.8	46656.4
A0A8J8YNE4	A0A8J8YNE4	A0A8J8YNE4_RAT	Apool	MICOS complex subunit	1	MGVITASGLAGLLSAR	MGVITASGLAGLLSAR	2	MGVITASGLAGLLSAR2	23480.7	23592.1	26933.3
A0A8J8YNE4	A0A8J8YNE4	A0A8J8YNE4_RAT	Apool	MICOS complex subunit	1	MGVITASGLAGLLSAR	MGVITASGLAGLLSAR	3	MGVITASGLAGLLSAR3	2066.15	5322.28	4200.95
Q6AY23	Q6AY23	P5CR2_RAT	Pycr2	Pyrroline-5-carboxylate reductase 2	1	MGVNLTR	MGVNLTR	2	MGVNLTR2	36056.9	37977.8	37518.4
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	MGVPEADLCSPSDLLR	MGVPEADLC(UniMod:4)SPSDLLR	2	MGVPEADLC(UniMod:4)SPSDLLR2	12577.2	17609.7	19803.7
A0A8I6A6W3	A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	1	MGVPICGACR	MGVPIC(UniMod:4)GAC(UniMod:4)R	2	MGVPIC(UniMod:4)GAC(UniMod:4)R2	2.08614e+06	1.75448e+06	1.96441e+06
P62425	P62425;A0A8I6AUG1;M0R3M3;D3ZU22;D4A8X2;D3ZJH5;A0A8I6B5R5;F1M2Q3;A0A8I5ZPC7;D4A6B9	RL7A_RAT	Rpl7a	Large ribosomal subunit protein eL8	0	MGVPYCIIK	MGVPYC(UniMod:4)IIK	2	MGVPYC(UniMod:4)IIK2	50954.5	62637	72297.9
Q5I0C3	Q5I0C3	MCCA_RAT	Mccc1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	1	MGVQSVAVYSEADR	MGVQSVAVYSEADR	2	MGVQSVAVYSEADR2	6895.59	6896.79	12027.3
Q6AYD3	Q6AYD3	PA2G4_RAT	Pa2g4	Proliferation-associated protein 2G4	1	MGVVECAK	MGVVEC(UniMod:4)AK	2	MGVVEC(UniMod:4)AK2	67290.9	63015.4	57399.8
Q5M7A4	Q5M7A4	UBA5_RAT	Uba5	Ubiquitin-like modifier-activating enzyme 5	1	MGVVSDYEK	MGVVSDYEK	2	MGVVSDYEK2	145548	131894	144570
Q5U1Z2	Q5U1Z2	TPPC3_RAT	Trappc3	Trafficking protein particle complex subunit 3	1	MGYNIGVR	MGYNIGVR	2	MGYNIGVR2	103224	116058	112119
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	MGYTPLHVASHYGNIK	MGYTPLHVASHYGNIK	3	MGYTPLHVASHYGNIK3	8611.79		
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	MGYTPLHVASHYGNIK	MGYTPLHVASHYGNIK	4	MGYTPLHVASHYGNIK4	10592.2	14998.7	11448.4
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	MGYVSGWGR	MGYVSGWGR	2	MGYVSGWGR2	492977	342004	297934
Q68G38	Q68G38	TOR1A_RAT	Tor1a	Torsin-1A	1	MHAGLIDAIKPFLDYYDVVDEVSYQK	MHAGLIDAIKPFLDYYDVVDEVSYQK	4	MHAGLIDAIKPFLDYYDVVDEVSYQK4	4575.3	8241.57	4609.44
P13635	Q920H8;P13635;A0A0G2K8Q3	CERU_RAT	Cp	Ceruloplasmin	0	MHAINGK	MHAINGK	1	MHAINGK1			29397.3
P13635	Q920H8;P13635;A0A0G2K8Q3	CERU_RAT	Cp	Ceruloplasmin	0	MHAINGK	MHAINGK	2	MHAINGK2			238004
O35353	O35353	GBB4_RAT	Gnb4	Guanine nucleotide-binding protein subunit beta-4	1	MHAIPLR	MHAIPLR	2	MHAIPLR2	184642	158818	131856
Q8K5B3	Q8K5B3	MCFD2_RAT	Mcfd2	Multiple coagulation factor deficiency protein 2 homolog	1	MHDYDGNSLLDGLELSTAITHVHK	MHDYDGNSLLDGLELSTAITHVHK	3	MHDYDGNSLLDGLELSTAITHVHK3	573.196	2522.15	
Q8K5B3	Q8K5B3	MCFD2_RAT	Mcfd2	Multiple coagulation factor deficiency protein 2 homolog	1	MHDYDGNSLLDGLELSTAITHVHK	MHDYDGNSLLDGLELSTAITHVHK	4	MHDYDGNSLLDGLELSTAITHVHK4	16884.1	21206.6	22780.2
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	MHEDINEEWISDK	MHEDINEEWISDK	2	MHEDINEEWISDK2	5441.45	4943.41	5333.09
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	MHEDINEEWISDK	MHEDINEEWISDK	3	MHEDINEEWISDK3	62902.9	49669.9	57902.5
Q6P6G2	Q6P6G2	CF089_RAT		Bombesin receptor-activated protein C6orf89 homolog	1	MHEVHDLFTIGSGEAMLQLIPPFQCR	MHEVHDLFTIGSGEAMLQLIPPFQC(UniMod:4)R	4	MHEVHDLFTIGSGEAMLQLIPPFQC(UniMod:4)R4	6051.16	9590.67	6243.35
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	MHFVHCFLPVAEGWPGEPR	MHFVHC(UniMod:4)FLPVAEGWPGEPR	4	MHFVHC(UniMod:4)FLPVAEGWPGEPR4	16518.7	14456.5	13811.4
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	MHGGGPSVTAGVPLK	MHGGGPSVTAGVPLK	3	MHGGGPSVTAGVPLK3	10329.8	13867.4	10098.9
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	MHGGGPSVTAGVPLKK	MHGGGPSVTAGVPLKK	3	MHGGGPSVTAGVPLKK3	5883.02	4563.82	5934.36
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	MHGGGPSVTAGVPLKK	MHGGGPSVTAGVPLKK	4	MHGGGPSVTAGVPLKK4	16206.2	18277.4	16903.1
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	MHGGGPTVTAGLPLPK	MHGGGPTVTAGLPLPK	3	MHGGGPTVTAGLPLPK3	15383.6	15086.9	21060.9
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	MHGLPGSQSQTALR	MHGLPGSQSQTALR	2	MHGLPGSQSQTALR2	11161.7	12632.5	11161.3
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	MHGLPGSQSQTALR	MHGLPGSQSQTALR	3	MHGLPGSQSQTALR3	54943.7	59725.8	39648.6
G3V6W5	G3V6W5	G3V6W5_RAT	Ifih1	RNA helicase	1	MHHVNMTPEFK	MHHVNMTPEFK	3	MHHVNMTPEFK3	5803.15		8980.39
P30121	P30121	TIMP2_RAT	Timp2	Metalloproteinase inhibitor 2	1	MHITLCDFIVPWDTLSITQK	MHITLC(UniMod:4)DFIVPWDTLSITQK	3	MHITLC(UniMod:4)DFIVPWDTLSITQK3	6863.24	13178.9	10110.6
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	MHLLEETTVR	MHLLEETTVR	2	MHLLEETTVR2	3434.22	3063.53	7621.26
D3ZTP3	D3ZTP3	D3ZTP3_RAT	Tmem59	Transmembrane protein 59	1	MHLLFPLTLVR	MHLLFPLTLVR	3	MHLLFPLTLVR3	22464.5	20055.6	17727.7
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	MHLQEGR	MHLQEGR	2	MHLQEGR2	233233	233345	
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	MHLSQIQR	MHLSQIQR	2	MHLSQIQR2	71977.1	61580.8	59759.9
Q5CZZ9	Q5CZZ9	PI51B_RAT	Pip5k1b	Phosphatidylinositol 4-phosphate 5-kinase type-1 beta	1	MHLTYDLK	MHLTYDLK	2	MHLTYDLK2	3111.47	5102.16	2418.63
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	MHMFIAR	MHMFIAR	2	MHMFIAR2	14450.3	8630.29	6566.26
Q5PQX0	Q5PQX0	UXS1_RAT	Uxs1	UDP-glucuronic acid decarboxylase 1	1	MHMNDGR	MHMNDGR	2	MHMNDGR2			6194.85
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	MHMNEFNTMSALSEIFSYVGK	MHMNEFNTMSALSEIFSYVGK	3	MHMNEFNTMSALSEIFSYVGK3	1888.98		3040.41
D4A183	D4A183	D4A183_RAT	Vnn3	Vanin 3	1	MHMTGSGIYSPDAVR	MHMTGSGIYSPDAVR	3	MHMTGSGIYSPDAVR3	7842.35	3074.31	5306.23
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	MHMWVEDLLDK	MHMWVEDLLDK	2	MHMWVEDLLDK2	18284.4	21929.3	17504.3
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	MHMWVEDLLDK	MHMWVEDLLDK	3	MHMWVEDLLDK3	31415.5	30559.8	29901.8
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	MHNQIPQITSDGK	MHNQIPQITSDGK	3	MHNQIPQITSDGK3	4426.66	6500.29	7357.45
B5DF57	B5DF57	B5DF57_RAT	Epb42	protein-glutamine gamma-glutamyltransferase	1	MHNSLDAPMQNCIISIFGR	MHNSLDAPMQNC(UniMod:4)IISIFGR	3	MHNSLDAPMQNC(UniMod:4)IISIFGR3	6172.36		10806
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	MHPALSAFPSNIFYEGSLQNGVTAADR	MHPALSAFPSNIFYEGSLQNGVTAADR	3	MHPALSAFPSNIFYEGSLQNGVTAADR3	4563.93		6111.4
D4A471	D4A471	D4A471_RAT	Cmc2	COX assembly mitochondrial protein	1	MHPDLSPHLHTEECNVLINLLK	MHPDLSPHLHTEEC(UniMod:4)NVLINLLK	4	MHPDLSPHLHTEEC(UniMod:4)NVLINLLK4	7535.11	11589.9	
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	MHPELGSFYDSR	MHPELGSFYDSR	2	MHPELGSFYDSR2	1.7466e+06	1.49113e+06	1.42058e+06
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	MHPELGSFYDSR	MHPELGSFYDSR	3	MHPELGSFYDSR3	311605	2.10892e+07	308376
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	MHPELGSFYDSRFGSLTSNFK	MHPELGSFYDSRFGSLTSNFK	4	MHPELGSFYDSRFGSLTSNFK4	21056.5	23582.6	18706.6
Q4G064	Q4G064	COQ5_RAT	Coq5	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial	1	MHPLPGTQLLDVAGGTGDIAFR	MHPLPGTQLLDVAGGTGDIAFR	3	MHPLPGTQLLDVAGGTGDIAFR3	7709.21	9232.73	8249.8
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	MHPQYSR	MHPQYSR	2	MHPQYSR2			119234
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	MHQAFHVNATVTEEGTGSEFSGSGR	MHQAFHVNATVTEEGTGSEFSGSGR	3	MHQAFHVNATVTEEGTGSEFSGSGR3	47152.9	34943.8	41591.1
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	MHQAFHVNATVTEEGTGSEFSGSGR	MHQAFHVNATVTEEGTGSEFSGSGR	4	MHQAFHVNATVTEEGTGSEFSGSGR4		3452.4	
D3ZKT0	D3ZKT0	TAM41_RAT	Tamm41	Phosphatidate cytidylyltransferase, mitochondrial	1	MHQGQLEIDKSPEGQFTQLMTLPR	MHQGQLEIDKSPEGQFTQLMTLPR	4	MHQGQLEIDKSPEGQFTQLMTLPR4	7991.35	13333.4	13184.9
D3ZDR2	D3ZDR2	D3ZDR2_RAT	Chmp6	Charged multivesicular body protein 6	1	MHQVMSIEEVER	MHQVMSIEEVER	2	MHQVMSIEEVER2	2444.19		
D3ZDR2	D3ZDR2	D3ZDR2_RAT	Chmp6	Charged multivesicular body protein 6	1	MHQVMSIEEVER	MHQVMSIEEVER	3	MHQVMSIEEVER3	12579.3	14957.3	10919.3
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	MHRPLMVQTEDQYVFLNQCVLDIIR	MHRPLMVQTEDQYVFLNQC(UniMod:4)VLDIIR	4	MHRPLMVQTEDQYVFLNQC(UniMod:4)VLDIIR4	54871.7	40877.9	57809.9
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	MHSLLIK	MHSLLIK	1	MHSLLIK1	2439.3	2837.77	3017.41
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	MHSLLIK	MHSLLIK	2	MHSLLIK2	52508.1	65259.4	69397.3
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	MHSLSYYLK	MHSLSYYLK	2	MHSLSYYLK2	119332	166472	50469.8
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	MHSLSYYLK	MHSLSYYLK	3	MHSLSYYLK3	68184.8	378982	268667
F1LU71	F1LU71	AUHM_RAT	Auh	Methylglutaconyl-CoA hydratase, mitochondrial	1	MHSSEVGPFVSK	MHSSEVGPFVSK	2	MHSSEVGPFVSK2	19738.2	6217.23	20725.5
F1LU71	F1LU71	AUHM_RAT	Auh	Methylglutaconyl-CoA hydratase, mitochondrial	1	MHSSEVGPFVSK	MHSSEVGPFVSK	3	MHSSEVGPFVSK3	102629	107513	116977
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	MHTISVPYSVMK	MHTISVPYSVMK	3	MHTISVPYSVMK3	20887.5	30887.4	26580.9
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	MHTSTGGGFCDCGDTEAWK	MHTSTGGGFC(UniMod:4)DC(UniMod:4)GDTEAWK	3	MHTSTGGGFC(UniMod:4)DC(UniMod:4)GDTEAWK3	3540.25	10828.5	12159.4
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	MHTTFEHDIQALGTQVR	MHTTFEHDIQALGTQVR	3	MHTTFEHDIQALGTQVR3	243695	353787	292061
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	MHTTFEHDIQALGTQVR	MHTTFEHDIQALGTQVR	4	MHTTFEHDIQALGTQVR4	577644	848420	677137
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	MHVMDVQGSTEASAIK	MHVMDVQGSTEASAIK	2	MHVMDVQGSTEASAIK2	62465.9	55722.2	48518.2
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	MHVMDVQGSTEASAIK	MHVMDVQGSTEASAIK	3	MHVMDVQGSTEASAIK3	704153	842322	881485
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	MHVMDVQGSTEASAIKDYVVK	MHVMDVQGSTEASAIKDYVVK	3	MHVMDVQGSTEASAIKDYVVK3	8466.33	8748.12	7345.9
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	MHVMDVQGSTEASAIKDYVVK	MHVMDVQGSTEASAIKDYVVK	4	MHVMDVQGSTEASAIKDYVVK4	17207.7	40990.6	27472.5
Q3B7D0	Q3B7D0	HEM6_RAT	Cpox	Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial	1	MHWWFGGGCDLTPTYLNR	MHWWFGGGC(UniMod:4)DLTPTYLNR	3	MHWWFGGGC(UniMod:4)DLTPTYLNR3		7387.44	6172.48
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	MIAEAIPELK	MIAEAIPELK	2	MIAEAIPELK2	1.19066e+06	1.20088e+06	1.25822e+06
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	MIAEAYATK	MIAEAYATK	2	MIAEAYATK2	81573.8	80557.4	64396.1
G3V9R8	G3V9R8	HNRPC_RAT	Hnrnpc	Heterogeneous nuclear ribonucleoprotein C	1	MIAGQVLDINLAAEPK	MIAGQVLDINLAAEPK	2	MIAGQVLDINLAAEPK2	5544.29	2503.68	3092.32
Q5XHY5	Q5XHY5	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	1	MIAILTENYGGK	MIAILTENYGGK	2	MIAILTENYGGK2		30221.8	22514.4
P97885	P97885	CXCL5_RAT	Cxcl5	C-X-C motif chemokine 5	1	MIANLEVIPAGPHCPK	MIANLEVIPAGPHC(UniMod:4)PK	2	MIANLEVIPAGPHC(UniMod:4)PK2	4584.93		
P97885	P97885	CXCL5_RAT	Cxcl5	C-X-C motif chemokine 5	1	MIANLEVIPAGPHCPK	MIANLEVIPAGPHC(UniMod:4)PK	3	MIANLEVIPAGPHC(UniMod:4)PK3	6785.06	1626.87	7339.42
P53812	P53812	PIPNB_RAT	Pitpnb	Phosphatidylinositol transfer protein beta isoform	1	MIAPEGSLVFHEK	MIAPEGSLVFHEK	3	MIAPEGSLVFHEK3	15220.3	13184.4	10723.4
Q4V8I7	Q4V8I7	LRC8A_RAT	Lrrc8a	Volume-regulated anion channel subunit LRRC8A	1	MICLPCK	MIC(UniMod:4)LPC(UniMod:4)K	2	MIC(UniMod:4)LPC(UniMod:4)K2	37197.6	21730	32169.7
B5DF93	B5DF93	PATL1_RAT	Patl1	Protein PAT1 homolog 1	1	MIDAVVTSR	MIDAVVTSR	2	MIDAVVTSR2	15647.1	39513.1	22469.2
F1LN92	F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	1	MIDDEVR	MIDDEVR	2	MIDDEVR2	60889.9	47106.6	34779
Q9ESM0	Q9ESM0	IP6K1_RAT	Ip6k1	Inositol hexakisphosphate kinase 1	1	MIDFAHSTFK	MIDFAHSTFK	3	MIDFAHSTFK3	11768.3	7970.63	4465.14
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	MIDILSAK	MIDILSAK	2	MIDILSAK2	47068.4	38216.5	43131.4
P70500	P70500	CDIPT_RAT	Cdipt	CDP-diacylglycerol--inositol 3-phosphatidyltransferase	1	MIDLSGNPVLR	MIDLSGNPVLR	2	MIDLSGNPVLR2	205364	183823	164435
A0A0G2K8F9	A0A0G2K8F9	A0A0G2K8F9_RAT	Pum2	Pumilio RNA-binding family member 2	1	MIDMAEPAQR	MIDMAEPAQR	2	MIDMAEPAQR2	16620.7	9408.84	9742.33
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	MIDVDALTDKECDWLNSYHQTCR	MIDVDALTDKEC(UniMod:4)DWLNSYHQTC(UniMod:4)R	3	MIDVDALTDKEC(UniMod:4)DWLNSYHQTC(UniMod:4)R3	6146.06	5975.11	
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	MIDVDALTDKECDWLNSYHQTCR	MIDVDALTDKEC(UniMod:4)DWLNSYHQTC(UniMod:4)R	4	MIDVDALTDKEC(UniMod:4)DWLNSYHQTC(UniMod:4)R4	14123.4	13238.4	12163.6
G3V762	G3V762	G3V762_RAT	Gfus	GDP-L-fucose synthase	1	MIDVQNR	MIDVQNR	2	MIDVQNR2	31024.7	32091.2	27392.9
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	MIEDQNQNK	MIEDQNQNK	2	MIEDQNQNK2	10798.5		18571.3
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	MIEDSGPGMK	MIEDSGPGMK	2	MIEDSGPGMK2	71707.5	55051.9	67172.1
A0A8I6AA62	A0A8I6AA62	A0A8I6AA62_RAT	Ofd1	OFD1, centriole and centriolar satellite protein	1	MIEESLK	MIEESLK	2	MIEESLK2	25565.6	16142.5	14001.4
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	MIELADVFSGVKPLTR	MIELADVFSGVKPLTR	3	MIELADVFSGVKPLTR3	35362.9	34778.4	34281.5
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	MIESLTK	MIESLTK	2	MIESLTK2	280581	228430	237932
Q6AXT5	Q6AXT5	RAB21_RAT	Rab21	Ras-related protein Rab-21	1	MIETAQVDER	MIETAQVDER	2	MIETAQVDER2	210435	202030	195354
Q9Z2V2	Q9Z2V2	CD40L_RAT	Cd40lg	CD40 ligand	1	MIETYSQPSPR	MIETYSQPSPR	2	MIETYSQPSPR2	5256.18	1088.77	3059.49
D4A8B0	D4A8B0	D4A8B0_RAT	Sec14l5	SEC14-like lipid binding 5	1	MIEVVEDNYPETLGR	MIEVVEDNYPETLGR	2	MIEVVEDNYPETLGR2	15353.4	17548	8344.02
D4A8B0	D4A8B0	D4A8B0_RAT	Sec14l5	SEC14-like lipid binding 5	1	MIEVVEDNYPETLGR	MIEVVEDNYPETLGR	3	MIEVVEDNYPETLGR3	4870.09		8172.79
P62898	P10715;D4A5L9;P62898	CYC_RAT	Cycs	Cytochrome c, somatic	0	MIFAGIK	MIFAGIK	1	MIFAGIK1	3548.34	11054.6	4499.08
P62898	P10715;D4A5L9;P62898	CYC_RAT	Cycs	Cytochrome c, somatic	0	MIFAGIK	MIFAGIK	2	MIFAGIK2	751757	664033	738045
P62898	P10715;D4A5L9;P62898	CYC_RAT	Cycs	Cytochrome c, somatic	0	MIFAGIKK	MIFAGIKK	2	MIFAGIKK2	57460.4	13452.2	12566.1
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	MIFEDEKPALLSQIDAEFQK	MIFEDEKPALLSQIDAEFQK	3	MIFEDEKPALLSQIDAEFQK3	59938.8	49827.6	51794.3
D4A0G9	D4A0G9	D4A0G9_RAT	Ercc6l	ERCC excision repair 6 like, spindle assembly checkpoint helicase	1	MIFLMALLER	MIFLMALLER	2	MIFLMALLER2			2782.82
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	MIGEFVSDR	MIGEFVSDR	2	MIGEFVSDR2	14807	12721.4	14321.6
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	MIGEFVSDRK	MIGEFVSDRK	3	MIGEFVSDRK3	14792.5	20957.1	24787.3
F1M471	F1M471	F1M471_RAT	Epm2aip1	EPM2A interacting protein 1	1	MIGENSGLVSYMR	MIGENSGLVSYMR	2	MIGENSGLVSYMR2	4973.81	1614.07	1353.26
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	MIGFSETAK	MIGFSETAK	2	MIGFSETAK2	81357.8	64872.1	67051.3
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	MIGGLFIYNHK	MIGGLFIYNHK	2	MIGGLFIYNHK2	12809.9		
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	MIGGLFIYNHK	MIGGLFIYNHK	3	MIGGLFIYNHK3	84158.8	60552.9	59605.8
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	MIGLESLR	MIGLESLR	2	MIGLESLR2	35267.1	41969.8	47933.4
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	MIGLTVGFDK	MIGLTVGFDK	2	MIGLTVGFDK2	61011.6	71279.1	57657.6
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	MIGMSLYYSQVR	MIGMSLYYSQVR	2	MIGMSLYYSQVR2	20350.3	25228.2	13854.1
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	MIGMSLYYSQVR	MIGMSLYYSQVR	3	MIGMSLYYSQVR3		3735.45	
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	MIHEGPLVWK	MIHEGPLVWK	2	MIHEGPLVWK2	35419.6	38686.5	16237.2
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	MIHEGPLVWK	MIHEGPLVWK	3	MIHEGPLVWK3	58653.7	77901.6	65972.2
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	MIHLESNFVQFK	MIHLESNFVQFK	3	MIHLESNFVQFK3	5345.41	3346.94	
P53676	P53676	AP3M1_RAT	Ap3m1	AP-3 complex subunit mu-1	1	MIHSLFLINCSGDIFLEK	MIHSLFLINC(UniMod:4)SGDIFLEK	3	MIHSLFLINC(UniMod:4)SGDIFLEK3	44049.4	38772.5	37174.9
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	MIIEEAK	MIIEEAK	2	MIIEEAK2	332672	305435	336078
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	MIIEEAKR	MIIEEAKR	2	MIIEEAKR2	60875.4	63425.3	42671.3
D3ZJI7	D3ZJI7	D3ZJI7_RAT	Serpinb11	Serpin family B member 11	1	MIILLPVGTASVNQIEK	MIILLPVGTASVNQIEK	2	MIILLPVGTASVNQIEK2	24746.3	16949.9	23642.3
D3ZJI7	D3ZJI7	D3ZJI7_RAT	Serpinb11	Serpin family B member 11	1	MIILLPVGTASVNQIEK	MIILLPVGTASVNQIEK	3	MIILLPVGTASVNQIEK3	9820.89	7007.88	9833.48
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	MIINEELMASLDQPTQTVVMHR	MIINEELMASLDQPTQTVVMHR	3	MIINEELMASLDQPTQTVVMHR3	34019.4	26880.2	19392.9
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	MIINEELMASLDQPTQTVVMHR	MIINEELMASLDQPTQTVVMHR	4	MIINEELMASLDQPTQTVVMHR4	10910.2		
A0A8I6A6I4	A0A8I6A6I4	A0A8I6A6I4_RAT	Atp11b	Phospholipid-transporting ATPase	1	MIITQQMEEIVRPLGPESLLLR	MIITQQMEEIVRPLGPESLLLR	3	MIITQQMEEIVRPLGPESLLLR3	21850.5	17738.6	12286.5
P11232	P11232	THIO_RAT	Txn	Thioredoxin	1	MIKPFFHSLCDK	MIKPFFHSLC(UniMod:4)DK	3	MIKPFFHSLC(UniMod:4)DK3	63455.6	60159.3	50962.9
P11232	P11232	THIO_RAT	Txn	Thioredoxin	1	MIKPFFHSLCDK	MIKPFFHSLC(UniMod:4)DK	4	MIKPFFHSLC(UniMod:4)DK4	162204	126777	147854
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	MILESIPNADR	MILESIPNADR	2	MILESIPNADR2	29614.8	18942	14959.6
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	MILESIPNADREVSR	MILESIPNADREVSR	3	MILESIPNADREVSR3	20887.3	30449.4	32813.1
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	MILLEVNNR	MILLEVNNR	2	MILLEVNNR2	648770	572729	570948
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	MILLEVNNRIIEETLALK	MILLEVNNRIIEETLALK	3	MILLEVNNRIIEETLALK3	3593.5		
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	MILPEGIQR	MILPEGIQR	2	MILPEGIQR2	82688.1	85065.4	72959.6
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	MILQDEDITTK	MILQDEDITTK	2	MILQDEDITTK2	61480.6	68076.5	73054.6
Q6AY41	Q6AY41	CC50A_RAT	Tmem30a	Cell cycle control protein 50A	1	MILSTISWMGGK	MILSTISWMGGK	2	MILSTISWMGGK2	25260.4	10105.4	22766.9
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	MILVVDR	MILVVDR	2	MILVVDR2	29084.9	25180.1	23898
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	MIMATNRPDTLDPALLR	MIMATNRPDTLDPALLR	3	MIMATNRPDTLDPALLR3	14012.7	16907.8	21813.6
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	MIMATNRPDTLDPALLRPGR	MIMATNRPDTLDPALLRPGR	3	MIMATNRPDTLDPALLRPGR3	55191.7	64212.3	47354.2
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	MIMATNRPDTLDPALLRPGR	MIMATNRPDTLDPALLRPGR	4	MIMATNRPDTLDPALLRPGR4	151373	147989	135155
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	MIMEELHDVDK	MIMEELHDVDK	3	MIMEELHDVDK3	24653.2	19866.8	16055.3
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	MIMFLDELGNVPELPDTTEHSR	MIMFLDELGNVPELPDTTEHSR	3	MIMFLDELGNVPELPDTTEHSR3	17018.5	27021.9	20783.7
O88600	O88600;Q66HA8	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	0	MIMQDKLEK	MIMQDKLEK	2	MIMQDKLEK2	6542.91	8489.69	3785.85
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	MINLSEPDTIDER	MINLSEPDTIDER	2	MINLSEPDTIDER2	179934	122739	124076
Q63598	Q63598	PLST_RAT	Pls3	Plastin-3	1	MINLSVPDTIDER	MINLSVPDTIDER	2	MINLSVPDTIDER2	49726.9	38742.5	39042.4
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	MIPCDFLIPVQTQHPIR	MIPC(UniMod:4)DFLIPVQTQHPIR	3	MIPC(UniMod:4)DFLIPVQTQHPIR3	73487.2	62422.4	69422.3
A0A8I5ZUI2	A0A8I5ZUI2	A0A8I5ZUI2_RAT	Ano10	Anoctamin	1	MIPGYPQAK	MIPGYPQAK	2	MIPGYPQAK2	77757.2	58572.3	81775.2
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	MIPSLCTHGK	MIPSLC(UniMod:4)THGK	2	MIPSLC(UniMod:4)THGK2	38604.9	27253.9	29798.7
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	MIPSLCTHGK	MIPSLC(UniMod:4)THGK	3	MIPSLC(UniMod:4)THGK3	120211	200886	159040
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	MIQDGKGDVTITNDGATILK	MIQDGKGDVTITNDGATILK	3	MIQDGKGDVTITNDGATILK3	4696.95	3399.68	6195.57
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	MIQEGTVAR	MIQEGTVAR	2	MIQEGTVAR2	86635.3	83432.4	93328.3
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	MIQEVMHSLVK	MIQEVMHSLVK	3	MIQEVMHSLVK3	11952.3	9301.25	11711
B0BNB9	B0BNB9	B0BNB9_RAT	Htra2	HtrA serine peptidase 2	1	MIQNAEDVYEAVR	MIQNAEDVYEAVR	2	MIQNAEDVYEAVR2	23991	19204.6	20690.1
B0BNB9	B0BNB9	B0BNB9_RAT	Htra2	HtrA serine peptidase 2	1	MIQNAEDVYEAVR	MIQNAEDVYEAVR	3	MIQNAEDVYEAVR3	18024.6	13511.6	16747.5
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	MIQQTFQQYASLR	MIQQTFQQYASLR	2	MIQQTFQQYASLR2	6294.03	3465.76	
Q5QE80	Q5QE79;Q5QE80	AOXC_RAT	Aox3	Aldehyde oxidase 3	0	MIQVASR	MIQVASR	2	MIQVASR2			10702.5
D3ZDI7	D3ZDI7	D3ZDI7_RAT	Ppp2r5a	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	MISANIFR	MISANIFR	2	MISANIFR2	18853.4	21468.4	19711
D3ZKX1	D3ZKX1	D3ZKX1_RAT	Washc3	WASH complex subunit 3	1	MISEGLDPELLEKPDAPVPSGESEK	MISEGLDPELLEKPDAPVPSGESEK	3	MISEGLDPELLEKPDAPVPSGESEK3	18887.3	25718.3	22145.4
G3V9W0	G3V9W0	G3V9W0_RAT	Cetn2	Centrin 2	1	MISEIDKEGTGK	MISEIDKEGTGK	3	MISEIDKEGTGK3	11768.7	12423	11335
P05708	P27926;P27881;P05708	HXK1_RAT	Hk1	Hexokinase-1	0	MISGMYLGEIVR	MISGMYLGEIVR	2	MISGMYLGEIVR2	390329	358360	341696
P05708	P27926;P27881;P05708	HXK1_RAT	Hk1	Hexokinase-1	0	MISGMYLGEIVR	MISGMYLGEIVR	3	MISGMYLGEIVR3	4371.46	3173.01	5985.91
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	MISLSYSR	MISLSYSR	2	MISLSYSR2	128673	204604	201629
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	MISQQLEDLGR	MISQQLEDLGR	2	MISQQLEDLGR2	137312	153487	152624
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	MISQQLEDLGRK	MISQQLEDLGRK	2	MISQQLEDLGRK2	12977	8568.21	8703.11
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	MISQQLEDLGRK	MISQQLEDLGRK	3	MISQQLEDLGRK3	199781	274565	238509
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	MISSSDAITQEFMDLR	MISSSDAITQEFMDLR	2	MISSSDAITQEFMDLR2	8535.63	12745	20103.4
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	MISSSDAITQEFMDLR	MISSSDAITQEFMDLR	3	MISSSDAITQEFMDLR3	2921.57	4267.67	
B2GV06	B2GV06	SCOT1_RAT	Oxct1	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial	1	MISSYVGENAEFER	MISSYVGENAEFER	2	MISSYVGENAEFER2	39397.6	44959.3	54640.8
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	MITETEK	MITETEK	1	MITETEK1	2508.41	2415.05	
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	MITETEK	MITETEK	2	MITETEK2	340459	339421	356885
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	MITFIDLAGHHK	MITFIDLAGHHK	3	MITFIDLAGHHK3	39864.2	39165.7	34858.8
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	MITGDSQETAIAIASR	MITGDSQETAIAIASR	2	MITGDSQETAIAIASR2	21244.1	11683.2	12391.6
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	MITGDSQETAIAIASR	MITGDSQETAIAIASR	3	MITGDSQETAIAIASR3	16323	19458.8	13878.8
P05712	P05712	RAB2A_RAT	Rab2a	Ras-related protein Rab-2A	1	MITIDGK	MITIDGK	2	MITIDGK2	111339	139534	133720
A0A0G2JWA3	A0A0G2JWA3	A0A0G2JWA3_RAT	Xpo7	Exportin 7	1	MITMYGNR	MITMYGNR	2	MITMYGNR2	15597.9	8365.35	16325.4
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	MITSAAGIISLLDEEEPQLK	MITSAAGIISLLDEEEPQLK	3	MITSAAGIISLLDEEEPQLK3	17821.5	16390	31094
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	MITSEIHCAVEIAK	MITSEIHC(UniMod:4)AVEIAK	2	MITSEIHC(UniMod:4)AVEIAK2	4279.02	1909.44	2819.38
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	MITSEIHCAVEIAK	MITSEIHC(UniMod:4)AVEIAK	3	MITSEIHC(UniMod:4)AVEIAK3	94315.7	127320	103338
P0C8E4	P0C8E4	M3K7_RAT	Map3k7	Mitogen-activated protein kinase kinase kinase 7	1	MITTSGPTSEKPAR	MITTSGPTSEKPAR	3	MITTSGPTSEKPAR3	49063	48041.4	37572.1
Q01129	Q01129	PGS2_RAT	Dcn	Decorin	1	MIVIELGGNPLK	MIVIELGGNPLK	2	MIVIELGGNPLK2	18760.1	15925.5	21431.4
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	MIVLSLPR	MIVLSLPR	2	MIVLSLPR2	386964	468833	373951
B2RYL4	B2RYL4	B2RYL4_RAT	Armc6	Armadillo repeat containing 6	1	MIVQENR	MIVQENR	2	MIVQENR2	55508.3	42493.6	52323.7
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	MIVSDVMQQAHHDQPLEK	MIVSDVMQQAHHDQPLEK	3	MIVSDVMQQAHHDQPLEK3	12494.8	15049.3	10982.6
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	MIVSDVMQQAHHDQPLEK	MIVSDVMQQAHHDQPLEK	4	MIVSDVMQQAHHDQPLEK4	31072.9	26778.7	25931.2
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	MIVTDIYNHR	MIVTDIYNHR	2	MIVTDIYNHR2	38427.4	31415.5	36730.8
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	MIVTDIYNHR	MIVTDIYNHR	3	MIVTDIYNHR3	124976	134296	133328
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	MIVTGHR	MIVTGHR	2	MIVTGHR2	24691.2	23371.1	19291.7
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	MIVVLGEIGGTEEYK	MIVVLGEIGGTEEYK	2	MIVVLGEIGGTEEYK2	10374.3	2707.02	3885.29
D3Z9C0	D3Z9C0	D3Z9C0_RAT	Mios	Meiosis regulator for oocyte development	1	MIVVTPNR	MIVVTPNR	2	MIVVTPNR2	10726.1	13608.6	18089.1
P45592	D4A315;A0A8I6A6K2;M0RC65;P45592;Q7M0E3;A0A8I6G734	COF1_RAT	Cfl1	Cofilin-1	0	MIYASSK	MIYASSK	1	MIYASSK1	68263.4	56430.3	61648.8
P45592	D4A315;A0A8I6A6K2;M0RC65;P45592;Q7M0E3;A0A8I6G734	COF1_RAT	Cfl1	Cofilin-1	0	MIYASSK	MIYASSK	2	MIYASSK2	3.05393e+06	2.90728e+06	3.22976e+06
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	MIYCIHALSLYLFK	MIYC(UniMod:4)IHALSLYLFK	3	MIYC(UniMod:4)IHALSLYLFK3	9198.55	21010.1	2129.59
Q642B0	Q642B0	Q642B0_RAT	Gpc4	Glypican 4	1	MIYCSHCR	MIYC(UniMod:4)SHC(UniMod:4)R	2	MIYC(UniMod:4)SHC(UniMod:4)R2	6087.16	8628.16	1980.49
A0A8I6AMS5	A0A8I6AMS5;A0A8I6G5W0;A0A8I6A0Y4	A0A8I6AMS5_RAT	ENSRNOG00000068441	Ig-like domain-containing protein	0	MIYGATNLAAGVPSR	MIYGATNLAAGVPSR	2	MIYGATNLAAGVPSR2	12480.2	18472.6	19532.1
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	MIYLQTLLAK	MIYLQTLLAK	2	MIYLQTLLAK2	38576.6	20112.4	31051.3
M0RD40	M0RD40	M0RD40_RAT	Sik3	non-specific serine/threonine protein kinase	1	MIYLVTEYASGGEIFDHLVAHGR	MIYLVTEYASGGEIFDHLVAHGR	4	MIYLVTEYASGGEIFDHLVAHGR4		10257	
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	MIYYLDSSSQK	MIYYLDSSSQK	2	MIYYLDSSSQK2	33600.8	24128	37356.1
P0DP29;P0DP30;P0DP31	P0DP30;Q5U206;P0DP29;P0DP31	CALM1_RAT;CALM2_RAT;CALM3_RAT	Calm1;Calm2;Calm3	Calmodulin-1	0	MKDTDSEEEIR	MKDTDSEEEIR	2	MKDTDSEEEIR2	77439.5	58827.8	83639.6
P0DP29;P0DP30;P0DP31	P0DP30;Q5U206;P0DP29;P0DP31	CALM1_RAT;CALM2_RAT;CALM3_RAT	Calm1;Calm2;Calm3	Calmodulin-1	0	MKDTDSEEEIR	MKDTDSEEEIR	3	MKDTDSEEEIR3	424203	428214	392654
P0DP29;P0DP30;P0DP31	P0DP30;Q5U206;P0DP29;P0DP31	CALM1_RAT;CALM2_RAT;CALM3_RAT	Calm1;Calm2;Calm3	Calmodulin-1	0	MKDTDSEEEIREAFR	MKDTDSEEEIREAFR	2	MKDTDSEEEIREAFR2	8011.32	4526.89	5030.97
P0DP29;P0DP30;P0DP31	P0DP30;Q5U206;P0DP29;P0DP31	CALM1_RAT;CALM2_RAT;CALM3_RAT	Calm1;Calm2;Calm3	Calmodulin-1	0	MKDTDSEEEIREAFR	MKDTDSEEEIREAFR	3	MKDTDSEEEIREAFR3	526772	514053	612931
P0DP29;P0DP30;P0DP31	P0DP30;Q5U206;P0DP29;P0DP31	CALM1_RAT;CALM2_RAT;CALM3_RAT	Calm1;Calm2;Calm3	Calmodulin-1	0	MKDTDSEEEIREAFR	MKDTDSEEEIREAFR	4	MKDTDSEEEIREAFR4	491188	741592	789512
Q2HWF0	P97531;Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	0	MKDVYEK	MKDVYEK	2	MKDVYEK2	73581.6	83252.6	
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	MKDVYEKNPQMGDPGSLQPK	MKDVYEKNPQMGDPGSLQPK	4	MKDVYEKNPQMGDPGSLQPK4	9251.22	9717.69	20886.8
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	MKDVYLK	MKDVYLK	2	MKDVYLK2	8286.86	11725.3	
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	MKEALSSWLQDGVDGFQVR	MKEALSSWLQDGVDGFQVR	3	MKEALSSWLQDGVDGFQVR3	4440.83	2604.01	1773.99
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	MKEEIIEVFVQELR	MKEEIIEVFVQELR	2	MKEEIIEVFVQELR2	27139.7	15840.8	16059.6
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	MKEEIIEVFVQELR	MKEEIIEVFVQELR	3	MKEEIIEVFVQELR3	111143	88747.2	96563.1
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	MKEEIIEVFVQELRK	MKEEIIEVFVQELRK	3	MKEEIIEVFVQELRK3	3067.58	10199.7	8677.91
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	MKEEIIEVFVQELRK	MKEEIIEVFVQELRK	4	MKEEIIEVFVQELRK4	17420.2	9927.91	11334.3
Q6IRE4	Q6IRE4	TS101_RAT	Tsg101	Tumor susceptibility gene 101 protein	1	MKEEMDGAQAELNALK	MKEEMDGAQAELNALK	3	MKEEMDGAQAELNALK3	33765.2	34708.5	41866.7
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	MKEESWNIHFFEYGR	MKEESWNIHFFEYGR	4	MKEESWNIHFFEYGR4	1945.03	6951.07	7849.36
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	MKEIAEAYLGGK	MKEIAEAYLGGK	3	MKEIAEAYLGGK3	16684.5	19085.8	24154.7
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	MKEIAEAYLGK	MKEIAEAYLGK	2	MKEIAEAYLGK2	59901.1	73652.5	68922.6
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	MKEIAEAYLGK	MKEIAEAYLGK	3	MKEIAEAYLGK3	52937.7	69805.4	78873.1
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	MKELELLCSMK	MKELELLC(UniMod:4)SMK	3	MKELELLC(UniMod:4)SMK3	1225.1	1126.41	3738.78
A0A0G2K9M5	A0A0G2K9M5	A0A0G2K9M5_RAT	Tbc1d8b	TBC1 domain family member 8B	1	MKEQSWNILFSECGR	MKEQSWNILFSEC(UniMod:4)GR	3	MKEQSWNILFSEC(UniMod:4)GR3	1422.89		2055.16
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	MKETAEAYLGK	MKETAEAYLGK	2	MKETAEAYLGK2	126788	115372	123701
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	MKETAEAYLGK	MKETAEAYLGK	3	MKETAEAYLGK3	342265	362799	376252
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	MKETAEAYLGKK	MKETAEAYLGKK	2	MKETAEAYLGKK2	6593.31	7773.9	7655.72
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	MKETAEAYLGKK	MKETAEAYLGKK	3	MKETAEAYLGKK3	71560.4	85979.4	90111.5
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	MKETAENYLGHTAK	MKETAENYLGHTAK	3	MKETAENYLGHTAK3	32886.9	26425.5	24947
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	MKETAENYLGHTAK	MKETAENYLGHTAK	4	MKETAENYLGHTAK4	18747.1	17898.6	49271.2
E9PT90	E9PT90	E9PT90_RAT	Spart	Spartin	1	MKETLQNVR	MKETLQNVR	2	MKETLQNVR2	2635.47	2063.24	
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	MKETVEGLQDK	MKETVEGLQDK	2	MKETVEGLQDK2	31259.9	30018.6	26391.7
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	MKETVEGLQDK	MKETVEGLQDK	3	MKETVEGLQDK3	112309	132991	147041
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	MKGLIDEANQDFTNR	MKGLIDEANQDFTNR	3	MKGLIDEANQDFTNR3	12175.5	10117.4	7033.06
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	MKIPETLEEDQQFMLK	MKIPETLEEDQQFMLK	3	MKIPETLEEDQQFMLK3	194.8	2355.71	3131.59
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	MKIPSNMWVEAWETAKPVPAR	MKIPSNMWVEAWETAKPVPAR	4	MKIPSNMWVEAWETAKPVPAR4	4220.89	8835.38	5063.2
B0K025	F1M0N4;B0K025	OSTC_RAT	Ostc	Oligosaccharyltransferase complex subunit OSTC	0	MKLPGYLMG	MKLPGYLMG	2	MKLPGYLMG2	15795.5	22082	14701.8
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	MKNPFAHLAEPLDPAQPGKK	MKNPFAHLAEPLDPAQPGKK	4	MKNPFAHLAEPLDPAQPGKK4		3943.67	7750.48
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	MKPILLQGHER	MKPILLQGHER	2	MKPILLQGHER2	5823.24	6339.57	
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	MKPILLQGHER	MKPILLQGHER	3	MKPILLQGHER3	174552	147294	156235
P22062	P22062	PIMT_RAT	Pcmt1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase	1	MKPLMGVIYVPLTDK	MKPLMGVIYVPLTDK	3	MKPLMGVIYVPLTDK3	21993.2	16220.8	22377.6
P22062	P22062	PIMT_RAT	Pcmt1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase	1	MKPLMGVIYVPLTDKEK	MKPLMGVIYVPLTDKEK	3	MKPLMGVIYVPLTDKEK3	51970.4	51128.8	50708.2
P22062	P22062	PIMT_RAT	Pcmt1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase	1	MKPLMGVIYVPLTDKEK	MKPLMGVIYVPLTDKEK	4	MKPLMGVIYVPLTDKEK4	90353	83542.2	92883.5
Q4KM73	Q4KM73	KCY_RAT	Cmpk1	UMP-CMP kinase	1	MKPLVVFVLGGPGAGK	MKPLVVFVLGGPGAGK	2	MKPLVVFVLGGPGAGK2	4270.9	4656.35	2574.15
Q4KM73	Q4KM73	KCY_RAT	Cmpk1	UMP-CMP kinase	1	MKPLVVFVLGGPGAGK	MKPLVVFVLGGPGAGK	3	MKPLVVFVLGGPGAGK3	38262	42567.8	47811.4
Q9Z1L0	Q9Z1L0	PK3CB_RAT	Pik3cb	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform	1	MKPLWLVYSNR	MKPLWLVYSNR	3	MKPLWLVYSNR3	18092.5	13796.5	9940.55
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	MKPNTLVLGFK	MKPNTLVLGFK	2	MKPNTLVLGFK2	6351.35	11950.2	11334.6
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	MKPNTLVLGFK	MKPNTLVLGFK	3	MKPNTLVLGFK3	55632	55455	52801.2
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	MKQTVEAMK	MKQTVEAMK	2	MKQTVEAMK2	7352.98	12499.3	17500.9
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	MKVPDVLFYDNVQHMVVMEDMLK	MKVPDVLFYDNVQHMVVMEDMLK	4	MKVPDVLFYDNVQHMVVMEDMLK4	1176.64	5579.2	
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	MKVPVMMLSSVPELHGYIDK	MKVPVMMLSSVPELHGYIDK	4	MKVPVMMLSSVPELHGYIDK4	6539.83	11855.4	9588.83
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	MLADLDDLNR	MLADLDDLNR	2	MLADLDDLNR2	249811	283896	226594
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	MLADSPPQDHSCCSGALYYGTK	MLADSPPQDHSC(UniMod:4)C(UniMod:4)SGALYYGTK	3	MLADSPPQDHSC(UniMod:4)C(UniMod:4)SGALYYGTK3	24352.7	31972.5	30379.9
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	MLADSPPQDHSCCSGALYYGTK	MLADSPPQDHSC(UniMod:4)C(UniMod:4)SGALYYGTK	4	MLADSPPQDHSC(UniMod:4)C(UniMod:4)SGALYYGTK4	199714	277765	268653
P84079	P61206;P84082;P84079	ARF1_RAT	Arf1	ADP-ribosylation factor 1	0	MLAEDELR	MLAEDELR	2	MLAEDELR2	621899	529906	566255
P84079	P61206;P84079	ARF1_RAT	Arf1	ADP-ribosylation factor 1	0	MLAEDELRDAVLLVFANK	MLAEDELRDAVLLVFANK	3	MLAEDELRDAVLLVFANK3	33651.7	16085.3	22612.9
A0A8I6AS90	A0A8I6AS90	A0A8I6AS90_RAT	Arl10	ADP-ribosylation factor like GTPase 10	1	MLAGKPPVEGHVPTWGFNSVR	MLAGKPPVEGHVPTWGFNSVR	4	MLAGKPPVEGHVPTWGFNSVR4	5576.32	5309.04	10901.2
B0BN30	B0BN30	B0BN30_RAT	Mtch1	Mitochondrial carrier 1	1	MLAHPLHVISMR	MLAHPLHVISMR	3	MLAHPLHVISMR3	6093.12	8735.85	6856.31
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	MLAITANTLR	MLAITANTLR	2	MLAITANTLR2	36228.3	50332.6	53078
A0A8I6APG6	A0A8I6APG6	A0A8I6APG6_RAT	ENSRNOG00000062438	Importin 11	1	MLALKDPVHTVSLQQFIYEK	MLALKDPVHTVSLQQFIYEK	4	MLALKDPVHTVSLQQFIYEK4	11852.1	17946.7	15219.7
P16446	P16446	PIPNA_RAT	Pitpna	Phosphatidylinositol transfer protein alpha isoform	1	MLAPEGALNIHEK	MLAPEGALNIHEK	2	MLAPEGALNIHEK2	10267.2	4072.92	5175.62
P16446	P16446	PIPNA_RAT	Pitpna	Phosphatidylinositol transfer protein alpha isoform	1	MLAPEGALNIHEK	MLAPEGALNIHEK	3	MLAPEGALNIHEK3	84647.6	78968.2	91110.4
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	MLAQESQSIPEK	MLAQESQSIPEK	2	MLAQESQSIPEK2	1.42075e+06	1.69779e+06	1.37337e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	MLAQESQSIPEKLK	MLAQESQSIPEKLK	3	MLAQESQSIPEKLK3	18638.8	16467.1	15954.8
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	MLAQQAVK	MLAQQAVK	2	MLAQQAVK2	720105	664572	689512
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	MLATLEPEQR	MLATLEPEQR	2	MLATLEPEQR2	26307	18523.3	28438.6
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	MLATLFK	MLATLFK	2	MLATLFK2	92987.9	84147.4	82147.3
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	MLATLFKDER	MLATLFKDER	3	MLATLFKDER3	69230.9	122814	115079
P17105	P17105	IP3KA_RAT	Itpka	Inositol-trisphosphate 3-kinase A	1	MLAVDPEAPTEEEHAQR	MLAVDPEAPTEEEHAQR	3	MLAVDPEAPTEEEHAQR3	15057.7	12573.7	12636.8
Q9EQN5	Q9EQN5	SMBP2_RAT	Ighmbp2	DNA-binding protein SMUBP-2	1	MLAVQYR	MLAVQYR	2	MLAVQYR2			6026.3
P29598	P29598	UROK_RAT	Plau	Urokinase-type plasminogen activator	1	MLCAADPEWK	MLC(UniMod:4)AADPEWK	2	MLC(UniMod:4)AADPEWK2	3889.07	3025.29	4256.09
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	MLCDSWCIEAATR	MLC(UniMod:4)DSWC(UniMod:4)IEAATR	2	MLC(UniMod:4)DSWC(UniMod:4)IEAATR2	7102.88	6131.08	5246.37
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	MLCEILK	MLC(UniMod:4)EILK	2	MLC(UniMod:4)EILK2	34112.1	27257.8	31402.6
M0RD40	M0RD40	M0RD40_RAT	Sik3	non-specific serine/threonine protein kinase	1	MLCHPHIIR	MLC(UniMod:4)HPHIIR	3	MLC(UniMod:4)HPHIIR3	6752.79		
A0A8I6AT07	A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	1	MLCYDPSHNMWLNCASLK	MLC(UniMod:4)YDPSHNMWLNC(UniMod:4)ASLK	3	MLC(UniMod:4)YDPSHNMWLNC(UniMod:4)ASLK3	9941.32	15503.7	13164
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	MLDAEDIVGTAR	MLDAEDIVGTAR	2	MLDAEDIVGTAR2	32248.1	29315.3	29193.4
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	MLDAEDIVGTARPDEK	MLDAEDIVGTARPDEK	2	MLDAEDIVGTARPDEK2	134006	140158	132483
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	MLDAEDIVGTARPDEK	MLDAEDIVGTARPDEK	3	MLDAEDIVGTARPDEK3	7.18198e+06	7.49065e+06	7.77598e+06
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	MLDAEDIVNTARPDEK	MLDAEDIVNTARPDEK	2	MLDAEDIVNTARPDEK2	23045.4	22401.1	19671.8
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	MLDAEDIVNTARPDEK	MLDAEDIVNTARPDEK	3	MLDAEDIVNTARPDEK3	801911	954215	1.01376e+06
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	MLDEAVFQVFK	MLDEAVFQVFK	2	MLDEAVFQVFK2	10388.3	12645	14622.8
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	MLDEMKDNLLLDMYLAPHVR	MLDEMKDNLLLDMYLAPHVR	3	MLDEMKDNLLLDMYLAPHVR3		8319.11	
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	MLDEMKDNLLLDMYLAPHVR	MLDEMKDNLLLDMYLAPHVR	4	MLDEMKDNLLLDMYLAPHVR4	36300.3	25384.4	28264.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	MLDEQYHIR	MLDEQYHIR	2	MLDEQYHIR2	25034.8	24652.2	17493.7
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	MLDEQYHIR	MLDEQYHIR	3	MLDEQYHIR3	96065.5	118012	145078
A0A0G2K8D1	A0A0G2K8D1	A0A0G2K8D1_RAT	Mospd2	Motile sperm domain containing 2	1	MLDESFQWR	MLDESFQWR	2	MLDESFQWR2	17603.6	14329.8	21114.2
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	MLDFFTIFSK	MLDFFTIFSK	2	MLDFFTIFSK2	8748.23	3899.97	
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	MLDGDVTDMVEAK	MLDGDVTDMVEAK	2	MLDGDVTDMVEAK2	126526	155323	133786
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	MLDGTVK	MLDGTVK	1	MLDGTVK1	52227.8	48476.1	38391.3
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	MLDGTVK	MLDGTVK	2	MLDGTVK2	2.30013e+06	2.40166e+06	2.48882e+06
D3ZZ81	A0A8I6AK94;Q91Z80;D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	0	MLDHLTK	MLDHLTK	2	MLDHLTK2	10931.7	13771.2	24643
A2RRU1	A2RRU1	GYS1_RAT	Gys1	Glycogen [starch] synthase, muscle	1	MLDKEDFTMMK	MLDKEDFTMMK	2	MLDKEDFTMMK2	4150.84	5694.27	4666.98
A2RRU1	A2RRU1	GYS1_RAT	Gys1	Glycogen [starch] synthase, muscle	1	MLDKEDFTMMK	MLDKEDFTMMK	3	MLDKEDFTMMK3	53368.6	72894	84611.3
O08654	O08654	PHAF1_RAT	Phaf1	Phagosome assembly factor 1	1	MLDLEVVPER	MLDLEVVPER	2	MLDLEVVPER2	13558.2	11891.2	7793.19
D4ADE8	E9PT29;D4ADE8;A0A8I6A7A4;A0A8I5ZKV9;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	MLDMGFEPQIR	MLDMGFEPQIR	2	MLDMGFEPQIR2	100668	113241	121126
D3ZUV9	D3ZUV9	D3ZUV9_RAT	Cnot3	CCR4-NOT transcription complex, subunit 3	1	MLDNDSILVDAIR	MLDNDSILVDAIR	2	MLDNDSILVDAIR2	6271.28	4483.96	
D3ZUV9	D3ZUV9	D3ZUV9_RAT	Cnot3	CCR4-NOT transcription complex, subunit 3	1	MLDNDSILVDAIRK	MLDNDSILVDAIRK	3	MLDNDSILVDAIRK3		4962.24	4378.43
Q63028	Q05764;Q63028	ADDA_RAT	Add1	Alpha-adducin	0	MLDNLGYR	MLDNLGYR	2	MLDNLGYR2	340704	341737	316990
Q5U2R0	Q5U2R0	MAT2B_RAT	Mat2b	Methionine adenosyltransferase 2 subunit beta	1	MLDPSIK	MLDPSIK	2	MLDPSIK2	19850.4	11838.6	6507.77
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	MLDQATNFEER	MLDQATNFEER	2	MLDQATNFEER2	91308.3	95655.6	89348.5
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	MLDQATNFEERK	MLDQATNFEERK	3	MLDQATNFEERK3	2841.28		10651.3
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	MLDQCLELQLFR	MLDQC(UniMod:4)LELQLFR	2	MLDQC(UniMod:4)LELQLFR2	2188.07		
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	MLDQTLLDLNEM	MLDQTLLDLNEM	2	MLDQTLLDLNEM2	248467	265094	264562
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	MLDTPVSK	MLDTPVSK	2	MLDTPVSK2	82575	83205.1	95196.5
Q63470	Q63470	DYR1A_RAT	Dyrk1a	Dual specificity tyrosine-phosphorylation-regulated kinase 1A	1	MLDYDPK	MLDYDPK	2	MLDYDPK2	19627.7	23824.1	25867.9
A0A8I6AML4	A0A8I6AML4	A0A8I6AML4_RAT	Galc	Galactocerebrosidase	1	MLDYEGLQR	MLDYEGLQR	2	MLDYEGLQR2	10057.6	9224.23	
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	MLDYEMLQR	MLDYEMLQR	2	MLDYEMLQR2	267899	270841	235247
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	MLDYLQGSGETPQTDIR	MLDYLQGSGETPQTDIR	2	MLDYLQGSGETPQTDIR2	295660	332365	271206
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	MLDYLQGSGETPQTDIR	MLDYLQGSGETPQTDIR	3	MLDYLQGSGETPQTDIR3	133483	152781	152966
Q62921	Q62921	HOIL1_RAT	Rbck1	RanBP-type and C3HC4-type zinc finger-containing protein 1	1	MLEDLGFK	MLEDLGFK	2	MLEDLGFK2	20138.8	19668.6	17519.7
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	MLEDRDLFVMR	MLEDRDLFVMR	3	MLEDRDLFVMR3	177767	207627	295070
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	MLEEEGTLDLLGLK	MLEEEGTLDLLGLK	2	MLEEEGTLDLLGLK2	13073	33053.6	8207.23
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	MLEEKEEPGFLTGLK	MLEEKEEPGFLTGLK	3	MLEEKEEPGFLTGLK3	10907.4	6944.47	4644.98
A0A8I5ZPV1	A0A8I5ZPV1	A0A8I5ZPV1_RAT	Tbc1d22a	TBC1 domain family, member 22a	1	MLEELVSR	MLEELVSR	2	MLEELVSR2	19319.7	23719.7	17352.1
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	MLEENTNILK	MLEENTNILK	2	MLEENTNILK2	919862	950743	950702
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	MLEIDPQK	MLEIDPQK	1	MLEIDPQK1	5208.4	7394.43	
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	MLEIDPQK	MLEIDPQK	2	MLEIDPQK2	616781	566327	583910
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	MLEILEGK	MLEILEGK	2	MLEILEGK2	90103.2	91505.2	69524.7
Q499N6	Q499N6	UBXN1_RAT	Ubxn1	UBX domain-containing protein 1	1	MLELVAQK	MLELVAQK	2	MLELVAQK2	18282.2	17188.1	14524.6
P61131	P61131	SIA4C_RAT	St3gal4	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4	1	MLEMGAVK	MLEMGAVK	2	MLEMGAVK2	6642.3	13253	9400.05
A0A8I6G9X6	A0A8I6G9X6	A0A8I6G9X6_RAT	Kntc1	Kinetochore associated 1	1	MLENLLNSISTQIPVEK	MLENLLNSISTQIPVEK	2	MLENLLNSISTQIPVEK2	7369.02	6417.74	7278.69
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	MLENSPR	MLENSPR	2	MLENSPR2	109626	143568	124714
Q6DGG0	M0RB67;Q6DGG0;A0A8I5ZR77	PPID_RAT	Ppid	Peptidyl-prolyl cis-trans isomerase D	0	MLENVEVNGEKPAK	MLENVEVNGEKPAK	3	MLENVEVNGEKPAK3	15601.5	9215.89	6098.08
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	MLEPLPPGEVTTNLK	MLEPLPPGEVTTNLK	2	MLEPLPPGEVTTNLK2	13479.4	11872.7	7826.52
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	MLEPLPPGEVTTNLKEPQCLPGDR	MLEPLPPGEVTTNLKEPQC(UniMod:4)LPGDR	3	MLEPLPPGEVTTNLKEPQC(UniMod:4)LPGDR3	67936	60504.6	66164.9
Q63413	Q5U216;Q63413	DX39B_RAT	Ddx39b	Spliceosome RNA helicase Ddx39b	0	MLEQLDMR	MLEQLDMR	2	MLEQLDMR2		7737.04	12033
D3ZUV9	D3ZUV9	D3ZUV9_RAT	Cnot3	CCR4-NOT transcription complex, subunit 3	1	MLETILR	MLETILR	2	MLETILR2	14974.3	15384	20255.4
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	MLETMIK	MLETMIK	2	MLETMIK2	124814	125370	117640
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	MLEVCELK	MLEVC(UniMod:4)ELK	2	MLEVC(UniMod:4)ELK2	123989	132718	133899
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	MLEVFHAIK	MLEVFHAIK	2	MLEVFHAIK2	1532.59	2254.87	
P70483	P58405;P70483;F1M6V8	STRN_RAT	Strn	Striatin	0	MLEYALK	MLEYALK	1	MLEYALK1	6233.75	7285.69	2227.9
P70483	P58405;P70483;F1M6V8	STRN_RAT	Strn	Striatin	0	MLEYALK	MLEYALK	2	MLEYALK2	508597	365645	395435
O35977	O35977	O35977_RAT	Gfra2	GDNF family receptor alpha-2	1	MLFCSCQDQACAER	MLFC(UniMod:4)SC(UniMod:4)QDQAC(UniMod:4)AER	2	MLFC(UniMod:4)SC(UniMod:4)QDQAC(UniMod:4)AER2	7906.72	9483.91	12742.1
O35977	O35977	O35977_RAT	Gfra2	GDNF family receptor alpha-2	1	MLFCSCQDQACAER	MLFC(UniMod:4)SC(UniMod:4)QDQAC(UniMod:4)AER	3	MLFC(UniMod:4)SC(UniMod:4)QDQAC(UniMod:4)AER3	5502.18	7937.12	5750.54
F1M4J1	F1M4J1	F1M4J1_RAT	LOC100294508	Dyslexia susceptibility 2-like	1	MLFFVQNDPPHQFFK	MLFFVQNDPPHQFFK	3	MLFFVQNDPPHQFFK3	2840.66	3323.01	3584.91
P63281	A0A8I6ATN6;P63281	UBC9_RAT	Ube2i	SUMO-conjugating enzyme UBC9	0	MLFKDDYPSSPPK	MLFKDDYPSSPPK	3	MLFKDDYPSSPPK3	5833.51		11734.3
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	MLFNQQELFGR	MLFNQQELFGR	2	MLFNQQELFGR2	151839	144610	157455
Q5BK32	Q5BK32	FAF2_RAT	Faf2	FAS-associated factor 2	1	MLFWACSTNKPEGYR	MLFWAC(UniMod:4)STNKPEGYR	3	MLFWAC(UniMod:4)STNKPEGYR3	37341.4	43531.6	44642.1
A0A0G2K8Q7	A0A0G2K8Q7	A0A0G2K8Q7_RAT	Lsm2	U6 snRNA-associated Sm-like protein LSm2	1	MLFYSFFK	MLFYSFFK	2	MLFYSFFK2	24420.9	24717	31146.3
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	MLGADAVGMSTVPEVIVAR	MLGADAVGMSTVPEVIVAR	2	MLGADAVGMSTVPEVIVAR2	19565	19685.1	21972.9
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	MLGADAVGMSTVPEVIVAR	MLGADAVGMSTVPEVIVAR	3	MLGADAVGMSTVPEVIVAR3	78386.5	72219.4	66285.8
D3ZG88	D3ZG88	D3ZG88_RAT	Znrd2	Zinc ribbon domain containing 2	1	MLGDTCADCGTILLQDK	MLGDTC(UniMod:4)ADC(UniMod:4)GTILLQDK	2	MLGDTC(UniMod:4)ADC(UniMod:4)GTILLQDK2	6895.99	5879.23	6561.63
D3ZG88	D3ZG88	D3ZG88_RAT	Znrd2	Zinc ribbon domain containing 2	1	MLGDTCADCGTILLQDK	MLGDTC(UniMod:4)ADC(UniMod:4)GTILLQDK	3	MLGDTC(UniMod:4)ADC(UniMod:4)GTILLQDK3	8329.82	3098.27	8633.64
Q5XIH7	Q5XIH7	PHB2_RAT	Phb2	Prohibitin-2	1	MLGEALSK	MLGEALSK	2	MLGEALSK2	465923	439420	498246
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	MLGFLDSK	MLGFLDSK	2	MLGFLDSK2	22661.3	10336.4	19603.6
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	MLGHLVSNAPR	MLGHLVSNAPR	2	MLGHLVSNAPR2	3856.28	2815.45	2051.49
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	MLGHLVSNAPR	MLGHLVSNAPR	3	MLGHLVSNAPR3	27334	29885.8	19144.8
Q6AXT5	Q6AXT5	RAB21_RAT	Rab21	Ras-related protein Rab-21	1	MLGNEICLCIVGNK	MLGNEIC(UniMod:4)LC(UniMod:4)IVGNK	2	MLGNEIC(UniMod:4)LC(UniMod:4)IVGNK2	81250.5	77903.1	87559.9
Q6AXT5	Q6AXT5	RAB21_RAT	Rab21	Ras-related protein Rab-21	1	MLGNEICLCIVGNK	MLGNEIC(UniMod:4)LC(UniMod:4)IVGNK	3	MLGNEIC(UniMod:4)LC(UniMod:4)IVGNK3	10174	8355.87	7011.22
Q3B7U9	Q3B7U9	FKBP8_RAT	Fkbp8	Peptidyl-prolyl cis-trans isomerase FKBP8	1	MLGNPSR	MLGNPSR	2	MLGNPSR2	70999.3	53939.3	61969.1
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	MLGQMTDQVADLR	MLGQMTDQVADLR	2	MLGQMTDQVADLR2	1.42964e+06	1.29731e+06	1.38383e+06
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	MLGQMTDQVADLR	MLGQMTDQVADLR	3	MLGQMTDQVADLR3	59584.1	45481.5	39317.2
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	MLGSAFPETVNNLLK	MLGSAFPETVNNLLK	2	MLGSAFPETVNNLLK2	19357.3	19785.7	20849.8
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	MLGVPDNR	MLGVPDNR	2	MLGVPDNR2	233792	250138	186150
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	MLGYFSLVGLLR	MLGYFSLVGLLR	2	MLGYFSLVGLLR2	7538.25	10146.8	11013.3
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	MLHAQYGELIQPR	MLHAQYGELIQPR	3	MLHAQYGELIQPR3	8451.2	9299.51	6349.63
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	MLHDYIGDKDFK	MLHDYIGDKDFK	3	MLHDYIGDKDFK3	9658.57	11168.9	4927.88
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	MLHDYIGDKDFKK	MLHDYIGDKDFKK	4	MLHDYIGDKDFKK4	8898.37		6126.48
P10252	P10252	CD48_RAT	Cd48	CD48 antigen	1	MLHETEDQWK	MLHETEDQWK	2	MLHETEDQWK2	93886.6	70824.5	85563.2
P10252	P10252	CD48_RAT	Cd48	CD48 antigen	1	MLHETEDQWK	MLHETEDQWK	3	MLHETEDQWK3	589793	613470	641707
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	MLHFLTAVVGSTCDVK	MLHFLTAVVGSTC(UniMod:4)DVK	2	MLHFLTAVVGSTC(UniMod:4)DVK2			7366.1
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	MLHFLTAVVGSTCDVK	MLHFLTAVVGSTC(UniMod:4)DVK	3	MLHFLTAVVGSTC(UniMod:4)DVK3	38513.2	32585.8	33055.7
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	MLHSCSSEGSAYR	MLHSC(UniMod:4)SSEGSAYR	2	MLHSC(UniMod:4)SSEGSAYR2	75076	68889.8	44923.9
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	MLHSCSSEGSAYR	MLHSC(UniMod:4)SSEGSAYR	3	MLHSC(UniMod:4)SSEGSAYR3	422973	434958	464483
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	MLHSCSSEGSAYRK	MLHSC(UniMod:4)SSEGSAYRK	2	MLHSC(UniMod:4)SSEGSAYRK2			9541.61
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	MLHSCSSEGSAYRK	MLHSC(UniMod:4)SSEGSAYRK	3	MLHSC(UniMod:4)SSEGSAYRK3			7887.73
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	MLHSCSSEGSAYRK	MLHSC(UniMod:4)SSEGSAYRK	4	MLHSC(UniMod:4)SSEGSAYRK4			11003.1
Q4FZV0	Q4FZV0	MANBA_RAT	Manba	Beta-mannosidase	1	MLHYFAQR	MLHYFAQR	2	MLHYFAQR2	10319.5	8614.21	8185.37
A0A8I6ANB2	A0A8I6ANB2	A0A8I6ANB2_RAT	Ppfibp1	PPFIA binding protein 1	1	MLHYMTVDDLLSLK	MLHYMTVDDLLSLK	3	MLHYMTVDDLLSLK3	3528.43	8052.51	1286.96
G3V8Z6	G3V8Z6	G3V8Z6_RAT	Krit1	KRIT1, ankyrin repeat containing	1	MLIALDK	MLIALDK	2	MLIALDK2	14280.1	14887.6	13841.3
P0C1S9	P0C1S9	DGLB_RAT	Daglb	Diacylglycerol lipase-beta	1	MLIDHMPDVMIR	MLIDHMPDVMIR	2	MLIDHMPDVMIR2	17463.3	13183.9	
P0C1S9	P0C1S9	DGLB_RAT	Daglb	Diacylglycerol lipase-beta	1	MLIDHMPDVMIR	MLIDHMPDVMIR	3	MLIDHMPDVMIR3	186505	197678	187323
Q68FP2	Q68FP2	PON3_RAT	Pon3	Serum paraoxonase/lactonase 3	1	MLIGTIFHK	MLIGTIFHK	2	MLIGTIFHK2		4927.7	
Q68FT1	Q68FT1	COQ9_RAT	Coq9	Ubiquinone biosynthesis protein COQ9, mitochondrial	1	MLIPYIEHWPR	MLIPYIEHWPR	3	MLIPYIEHWPR3	19962.1	15333.8	17072.4
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	MLIQILTELEHSGIGR	MLIQILTELEHSGIGR	3	MLIQILTELEHSGIGR3	14529	6613.54	9147.4
Q9R064	Q9R064	GORS2_RAT	Gorasp2	Golgi reassembly-stacking protein 2	1	MLIYSSK	MLIYSSK	2	MLIYSSK2	138446	110074	96138.1
P14046	Q6IE52;A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	MLIYTILPDGEVIADSVK	MLIYTILPDGEVIADSVK	3	MLIYTILPDGEVIADSVK3	1.32194e+06	75110.8	1.09173e+06
P14046	Q6IE52;A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	MLIYTILPDGEVIADSVK	MLIYTILPDGEVIADSVK	4	MLIYTILPDGEVIADSVK4	20113.1	4140.73	5258
P14046	Q6IE52;A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	MLIYTILPDGEVIADSVKFQVEK	MLIYTILPDGEVIADSVKFQVEK	3	MLIYTILPDGEVIADSVKFQVEK3	52854.1	36289.3	41305.9
P14046	Q6IE52;A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	MLIYTILPDGEVIADSVKFQVEKCLR	MLIYTILPDGEVIADSVKFQVEKC(UniMod:4)LR	4	MLIYTILPDGEVIADSVKFQVEKC(UniMod:4)LR4	31642.6	33155.6	23490.9
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	MLIYTILPDGEVIADSVTFQVEK	MLIYTILPDGEVIADSVTFQVEK	3	MLIYTILPDGEVIADSVTFQVEK3	321381	152049	98160.7
P04906	A0A8I6A0V1;A0A0G2K4Q5;P04906;A0A8I6G5W8	GSTP1_RAT	Gstp1	Glutathione S-transferase P	0	MLLADQGQSWK	MLLADQGQSWK	2	MLLADQGQSWK2	254519	194395	227625
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	MLLCEAVAAVMAK	MLLC(UniMod:4)EAVAAVMAK	2	MLLC(UniMod:4)EAVAAVMAK2	30148.7	26897.5	22790.3
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	MLLCEAVAAVMAK	MLLC(UniMod:4)EAVAAVMAK	3	MLLC(UniMod:4)EAVAAVMAK3	11158.6	5881.82	8739.2
A0A8I5ZU57	A0A8I5ZU57	A0A8I5ZU57_RAT	Ccny	Cyclin Y	1	MLLDIFDENLHPLSK	MLLDIFDENLHPLSK	2	MLLDIFDENLHPLSK2			15867.5
A0A8I5ZU57	A0A8I5ZU57	A0A8I5ZU57_RAT	Ccny	Cyclin Y	1	MLLDIFDENLHPLSK	MLLDIFDENLHPLSK	3	MLLDIFDENLHPLSK3	23919.2	25042.1	29276.3
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	MLLDPMGGIVMTNDGNAILR	MLLDPMGGIVMTNDGNAILR	3	MLLDPMGGIVMTNDGNAILR3	67664.8	91307.5	75158.8
Q6AY23	Q6AY23	P5CR2_RAT	Pycr2	Pyrroline-5-carboxylate reductase 2	1	MLLDSEDHPGQLK	MLLDSEDHPGQLK	3	MLLDSEDHPGQLK3	51988.9	32915.3	46297
P61751	P61751	ARF4_RAT	Arf4	ADP-ribosylation factor 4	1	MLLEDELQDAVLLLFANK	MLLEDELQDAVLLLFANK	3	MLLEDELQDAVLLLFANK3			3507.23
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	MLLESLK	MLLESLK	2	MLLESLK2	256870	305637	254735
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	MLLFTEVTR	MLLFTEVTR	2	MLLFTEVTR2	63368.8	88379.9	45588.3
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	MLLHDQALLYSSGWPFEK	MLLHDQALLYSSGWPFEK	3	MLLHDQALLYSSGWPFEK3	18586.8	19120.6	14772.6
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	MLLIDYK	MLLIDYK	2	MLLIDYK2	51985.9	57831.4	60038.4
Q4V8E2	Q4V8E2	Q4V8E2_RAT	Psmd14	Proteasome 26S subunit, non-ATPase 14	1	MLLNLHK	MLLNLHK	2	MLLNLHK2	49897.8	33482.6	41372.4
Q63065	Q63065	PDK1_RAT	Pdk1	[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial	1	MLLNQHSLLFGGK	MLLNQHSLLFGGK	3	MLLNQHSLLFGGK3	13326.3	1422.23	10747.3
Q66H86	Q66H86	OLFL1_RAT	Olfml1	Olfactomedin-like protein 1	1	MLLPGGAGR	MLLPGGAGR	2	MLLPGGAGR2	94734.1	82889.5	75704.9
G3V965	G3V965	G3V965_RAT	Agpat5	1-acylglycerol-3-phosphate O-acyltransferase 5	1	MLLSLVLHTYSMR	MLLSLVLHTYSMR	3	MLLSLVLHTYSMR3	5570.09	2040.41	6911.72
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	MLLSWDGGESR	MLLSWDGGESR	2	MLLSWDGGESR2	39209.6	33594.9	37058.8
P50398	P50398	GDIA_RAT	Gdi1	Rab GDP dissociation inhibitor alpha	1	MLLYTEVTR	MLLYTEVTR	2	MLLYTEVTR2	106600	98173.2	82773.1
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	MLMALVSDSALFNTR	MLMALVSDSALFNTR	2	MLMALVSDSALFNTR2	71609.3	85001.3	83926.5
Q6P503	Q6P503	Q6P503_RAT	Atp6v1d	V-type proton ATPase subunit D	1	MLMGEVMR	MLMGEVMR	2	MLMGEVMR2	34884.9	23929.5	32398.3
O08561	O08561	PI4KB_RAT	Pi4kb	Phosphatidylinositol 4-kinase beta	1	MLMLQGLIAAR	MLMLQGLIAAR	2	MLMLQGLIAAR2		2166.43	3205.53
P97697	P97697	IMPA1_RAT	Impa1	Inositol monophosphatase 1	1	MLMSSIK	MLMSSIK	2	MLMSSIK2	92214.4	75363	33656.5
Q63493	Q63493	CD1D_RAT	Cd1d	Antigen-presenting glycoprotein CD1d	1	MLNADEGTR	MLNADEGTR	2	MLNADEGTR2	94054.2	85457.6	107896
Q62991	Q62991	SCFD1_RAT	Scfd1	Sec1 family domain-containing protein 1	1	MLNFNVPHVK	MLNFNVPHVK	2	MLNFNVPHVK2	5945.52	3126.59	4760.65
Q62991	Q62991	SCFD1_RAT	Scfd1	Sec1 family domain-containing protein 1	1	MLNFNVPHVK	MLNFNVPHVK	3	MLNFNVPHVK3	13702.1	17790.3	18576
A0A8I5ZQ10	A0A8I5ZQ10	A0A8I5ZQ10_RAT	Naa50	N(alpha)-acetyltransferase 50, NatE catalytic subunit	1	MLNHVLNICEK	MLNHVLNIC(UniMod:4)EK	3	MLNHVLNIC(UniMod:4)EK3	705.44		2896.91
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	MLNIHPSLLPSFK	MLNIHPSLLPSFK	3	MLNIHPSLLPSFK3	21784.1	13813.2	19831
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	MLNSNTENPYLMWNNSTR	MLNSNTENPYLMWNNSTR	3	MLNSNTENPYLMWNNSTR3	12730	12790.3	13951.6
A0A8I6ATH0	A0A8I6ATH0	A0A8I6ATH0_RAT	Braf	non-specific serine/threonine protein kinase	1	MLNVTAPTPQQLQAFK	MLNVTAPTPQQLQAFK	2	MLNVTAPTPQQLQAFK2	35375.9	22218.4	26783.3
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	MLPAEDTLPAADAALILHR	MLPAEDTLPAADAALILHR	3	MLPAEDTLPAADAALILHR3	29372.3	37064.6	37863.6
P45592	P45592	COF1_RAT	Cfl1	Cofilin-1	1	MLPDKDCR	MLPDKDC(UniMod:4)R	2	MLPDKDC(UniMod:4)R2	47663.3	616498	
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	MLPEIDQNKDR	MLPEIDQNKDR	2	MLPEIDQNKDR2	59668.4	42736.6	53327.3
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	MLPEIDQNKDR	MLPEIDQNKDR	3	MLPEIDQNKDR3	54680	51857.4	70412.9
D3ZR63	D3ZR63	D3ZR63_RAT	Gfod1	Glucose-fructose oxidoreductase domain containing 1	1	MLPGVGVFGTSLTAR	MLPGVGVFGTSLTAR	2	MLPGVGVFGTSLTAR2	19428.8	17818.3	29011.5
B0BNI5	B0BNI5	OLFL3_RAT	Olfml3	Olfactomedin-like protein 3	1	MLPLLEVAEK	MLPLLEVAEK	2	MLPLLEVAEK2	113121	103943	112018
B0BNI5	B0BNI5	OLFL3_RAT	Olfml3	Olfactomedin-like protein 3	1	MLPLLEVAEKER	MLPLLEVAEKER	3	MLPLLEVAEKER3	35391	43357.1	30026.3
D4A2C6	D4A2C6	D4A2C6_RAT	Lsm4	U6 snRNA-associated Sm-like protein LSm4	1	MLPLSLLK	MLPLSLLK	2	MLPLSLLK2	36274.2	19537.7	29077.6
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	MLPSFVR	MLPSFVR	2	MLPSFVR2	921604	812542	819808
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	MLPSTSR	MLPSTSR	2	MLPSTSR2	275768	365174	356744
P05708	P27881;M0R3X7;P05708	HXK1_RAT	Hk1	Hexokinase-1	0	MLPTFVR	MLPTFVR	2	MLPTFVR2	442675	482588	524384
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	MLPTIIADNAGYDSADLVAQLR	MLPTIIADNAGYDSADLVAQLR	3	MLPTIIADNAGYDSADLVAQLR3	206523	215183	204612
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	MLPYAMADKR	MLPYAMADKR	3	MLPYAMADKR3	14901	26791.5	17836.3
Q9Z1L0	Q9Z1L0	PK3CB_RAT	Pik3cb	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform	1	MLPYGCLATGDR	MLPYGC(UniMod:4)LATGDR	2	MLPYGC(UniMod:4)LATGDR2	27992.7	23334.5	30503.5
Q6AYT3	Q6AYT3;A0A8I5YBA4	RTCB_RAT	Rtcb	RNA-splicing ligase RtcB homolog	0	MLQADPNK	MLQADPNK	2	MLQADPNK2	41797.7	40730.1	44864.6
Q80ZF4	Q80ZF4	Q80ZF4_RAT	Mapkapk2	non-specific serine/threonine protein kinase	1	MLQDCPK	MLQDC(UniMod:4)PK	2	MLQDC(UniMod:4)PK2	10717.3	18506.8	21690.9
A0A8I6B543	A0A8I6B543	A0A8I6B543_RAT	Serac1	Serine active site containing 1	1	MLQDEFLELVK	MLQDEFLELVK	2	MLQDEFLELVK2		2211.4	
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	MLQDWITPEK	MLQDWITPEK	2	MLQDWITPEK2	42274	73538.7	70967.9
P84083	P84083	ARF5_RAT	Arf5	ADP-ribosylation factor 5	1	MLQEDELR	MLQEDELR	2	MLQEDELR2	130499	129862	151464
P84083	P84083	ARF5_RAT	Arf5	ADP-ribosylation factor 5	1	MLQEDELRDAVLLVFANK	MLQEDELRDAVLLVFANK	3	MLQEDELRDAVLLVFANK3	33343.6	33247.7	36182.9
P84083	P84083	ARF5_RAT	Arf5	ADP-ribosylation factor 5	1	MLQEDELRDAVLLVFANK	MLQEDELRDAVLLVFANK	4	MLQEDELRDAVLLVFANK4	5179.16	2279.35	6658.34
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	MLQEEEEAK	MLQEEEEAK	2	MLQEEEEAK2	175127	141866	170839
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	MLQHAASNK	MLQHAASNK	2	MLQHAASNK2			8359.8
Q5XIP1	Q5XIP1	PELO_RAT	Pelo	Protein pelota homolog	1	MLQHEPDR	MLQHEPDR	2	MLQHEPDR2	13265		6835.2
A0A0G2JYN4	A0A0G2JYN4	A0A0G2JYN4_RAT	Ergic2	Endoplasmic reticulum-Golgi intermediate compartment protein	1	MLQLIQSR	MLQLIQSR	2	MLQLIQSR2	19328.7	27153.4	19884.4
G3V7E6	G3V7E6	G3V7E6_RAT	Pcm1	Pericentriolar material 1	1	MLQQQEQLR	MLQQQEQLR	2	MLQQQEQLR2	5853.17	9863.58	6965.76
D3Z9R8	D3Z9R8;A0A8I6AEQ6	ATP68_RAT	Atp5mpl	ATP synthase subunit ATP5MPL, mitochondrial	0	MLQSFIK	MLQSFIK	1	MLQSFIK1	2107.21	2060.63	
D3Z9R8	D3Z9R8;A0A8I6AEQ6	ATP68_RAT	Atp5mpl	ATP synthase subunit ATP5MPL, mitochondrial	0	MLQSFIK	MLQSFIK	2	MLQSFIK2	376569	452068	389985
A1L1K6	A1L1K6	A1L1K6_RAT	Gtf3c5	General transcription factor IIIC subunit 5	1	MLQTLGGEEGVSR	MLQTLGGEEGVSR	2	MLQTLGGEEGVSR2	3829.71	5141.03	3282.29
G3V8V4	G3V8V4	G3V8V4_RAT	Cers2	Ceramide synthase 2	1	MLQTLYDYFWWER	MLQTLYDYFWWER	2	MLQTLYDYFWWER2	964.284	6617.32	4594.11
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	MLQTSSVLVSGLR	MLQTSSVLVSGLR	2	MLQTSSVLVSGLR2	87379.6	69667.2	52202.1
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	MLQTSSVLVSGLR	MLQTSSVLVSGLR	3	MLQTSSVLVSGLR3	6773.69	3663.13	5702.84
D3ZYF5	D3ZYF5	D3ZYF5_RAT	Trim58	Tripartite motif-containing 58	1	MLQVALELVK	MLQVALELVK	2	MLQVALELVK2	9660.61	6740.92	4305.45
Q9JHB5	Q9JHB5	TSNAX_RAT	Tsnax	Translin-associated protein X	1	MLQVAQELSGEDMHQFHR	MLQVAQELSGEDMHQFHR	4	MLQVAQELSGEDMHQFHR4	16315.8	14024.2	13260
B2GV52	B2GV52	BL1S5_RAT	Bloc1s5	Biogenesis of lysosome-related organelles complex 1 subunit 5	1	MLQWEEFLR	MLQWEEFLR	2	MLQWEEFLR2	19036.2	35728.7	17213.7
Q63362	Q63362	NDUA5_RAT	Ndufa5	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5	1	MLQWKPWEPLVEEPPANQWK	MLQWKPWEPLVEEPPANQWK	3	MLQWKPWEPLVEEPPANQWK3	45401.6	55437.6	40809.2
A0A0G2K1D2	A0A0G2K1D2	A0A0G2K1D2_RAT	Rap1gds1	Rap1 GTPase-GDP dissociation stimulator 1	1	MLSAGVTETVLK	MLSAGVTETVLK	2	MLSAGVTETVLK2	10580.6		
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	MLSAVSQQVQCIQEALR	MLSAVSQQVQC(UniMod:4)IQEALR	3	MLSAVSQQVQC(UniMod:4)IQEALR3	56996.9	58910.3	32124.6
Q6PDV7	A0A8I6G4V0;A0A8I5ZR88;Q6PDV7	RL10_RAT	Rpl10	Large ribosomal subunit protein uL16	0	MLSCAGADR	MLSC(UniMod:4)AGADR	2	MLSC(UniMod:4)AGADR2	56678.2	72005.7	65756.7
Q6TUD3	Q6TUD3	Q6TUD3_RAT	Rdh11	LRRGT00111	1	MLSCGVCTSNVQLSGK	MLSC(UniMod:4)GVC(UniMod:4)TSNVQLSGK	2	MLSC(UniMod:4)GVC(UniMod:4)TSNVQLSGK2	36598.4	39434.7	32626.8
Q6TUD3	Q6TUD3	Q6TUD3_RAT	Rdh11	LRRGT00111	1	MLSCGVCTSNVQLSGK	MLSC(UniMod:4)GVC(UniMod:4)TSNVQLSGK	3	MLSC(UniMod:4)GVC(UniMod:4)TSNVQLSGK3	5010.41	574.245	1234.18
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	MLSDLVEFCDQMGLPMDVSSAGALNK	MLSDLVEFC(UniMod:4)DQMGLPMDVSSAGALNK	3	MLSDLVEFC(UniMod:4)DQMGLPMDVSSAGALNK3	15119.4	11536.9	20462
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	MLSESEK	MLSESEK	2	MLSESEK2		321517	
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	MLSGFIPLK	MLSGFIPLK	2	MLSGFIPLK2	395297	215182	252504
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	MLSGFIPLKPTVK	MLSGFIPLKPTVK	2	MLSGFIPLKPTVK2	3.57847e+07	2.5635e+07	2.51686e+07
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	MLSGFIPLKPTVK	MLSGFIPLKPTVK	3	MLSGFIPLKPTVK3	389584	435524	448009
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	MLSGFIPLKPTVKK	MLSGFIPLKPTVKK	2	MLSGFIPLKPTVKK2	29340.4	29514	17979.5
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	MLSGFIPLKPTVKK	MLSGFIPLKPTVKK	3	MLSGFIPLKPTVKK3	370282	278818	332783
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	MLSGFIPLKPTVKK	MLSGFIPLKPTVKK	4	MLSGFIPLKPTVKK4	627565	641099	727154
A0A8I6A8Q1	A0A8I6A8Q1	A0A8I6A8Q1_RAT	A2ml1	Alpha-2-macroglobulin-like 1	1	MLSGFTPVFSSIEELK	MLSGFTPVFSSIEELK	2	MLSGFTPVFSSIEELK2	9481.93	8264.06	13588.1
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	MLSGMVR	MLSGMVR	2	MLSGMVR2	79285.1	73533.2	73409.1
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	MLSHQLVSQPGLNR	MLSHQLVSQPGLNR	2	MLSHQLVSQPGLNR2		1835.17	1159.42
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	MLSHQLVSQPGLNR	MLSHQLVSQPGLNR	3	MLSHQLVSQPGLNR3	55232.1	81776.4	66272.8
P42667	P42667	SC11A_RAT	Sec11a	Signal peptidase complex catalytic subunit SEC11A	1	MLSLDFLDDVR	MLSLDFLDDVR	2	MLSLDFLDDVR2	35453.1	25955.6	19056.9
P42667	P42667	SC11A_RAT	Sec11a	Signal peptidase complex catalytic subunit SEC11A	1	MLSLDFLDDVRR	MLSLDFLDDVRR	3	MLSLDFLDDVRR3	40251.2	30694.7	35027.9
O88483	O88483	PDP1_RAT	Pdp1	[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial	1	MLSLPEELAR	MLSLPEELAR	2	MLSLPEELAR2	18254.4	9193.1	17215.7
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	MLSLVLMHKPLR	MLSLVLMHKPLR	3	MLSLVLMHKPLR3	10492.9	13077.3	5069.6
F1M332	F1M332	F1M332_RAT	Arhgap28	Rho GTPase activating protein 28	1	MLSNESLHPPTFSR	MLSNESLHPPTFSR	3	MLSNESLHPPTFSR3	17642.1	22891.5	19407.7
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	MLSPGFDSSVYSDLCEATEAVRPEER	MLSPGFDSSVYSDLC(UniMod:4)EATEAVRPEER	4	MLSPGFDSSVYSDLC(UniMod:4)EATEAVRPEER4	30930.3	33740.6	43893.6
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	MLSSCCK	MLSSC(UniMod:4)C(UniMod:4)K	2	MLSSC(UniMod:4)C(UniMod:4)K2		37263.7	
P15684	P15684	AMPN_RAT	Anpep	Aminopeptidase N	1	MLSSFLTEDLFK	MLSSFLTEDLFK	2	MLSSFLTEDLFK2	8463.59	12692.7	15477.9
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	MLSTPGR	MLSTPGR	2	MLSTPGR2	87730.3	96662.7	85817.9
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	MLSVHVVGYGK	MLSVHVVGYGK	3	MLSVHVVGYGK3	39202.4	32569.6	47263.1
P53678	P53678	AP3M2_RAT	Ap3m2	AP-3 complex subunit mu-2	1	MLSWDVGK	MLSWDVGK	2	MLSWDVGK2	7741.52	5543.33	
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	MLTAQDMSYDEAR	MLTAQDMSYDEAR	2	MLTAQDMSYDEAR2	686201	716994	733865
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	MLTAQDMSYDEAR	MLTAQDMSYDEAR	3	MLTAQDMSYDEAR3	21666.7	24310.2	28815.8
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	MLTATAMPTVATSVQSPYR	MLTATAMPTVATSVQSPYR	3	MLTATAMPTVATSVQSPYR3	6269.57	6978.93	10220.7
F7EUH5	F7EUH5	F7EUH5_RAT	Plxdc2	Plexin domain containing 2	1	MLTATQYIAPLMANFDPSVSR	MLTATQYIAPLMANFDPSVSR	3	MLTATQYIAPLMANFDPSVSR3		11197.1	7444.21
Q5XIA5	Q5XIA5	Q5XIA5_RAT	Coasy	Coenzyme A synthase	1	MLTDIVWPVIAK	MLTDIVWPVIAK	2	MLTDIVWPVIAK2		1969.22	4406.44
M0RD03	M0RD03;A0A8I6AMY8	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	0	MLTEAIMHDCVVK	MLTEAIMHDC(UniMod:4)VVK	2	MLTEAIMHDC(UniMod:4)VVK2	15420.5	14140.6	9013.79
M0RD03	M0RD03;A0A8I6AMY8	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	0	MLTEAIMHDCVVK	MLTEAIMHDC(UniMod:4)VVK	3	MLTEAIMHDC(UniMod:4)VVK3	81151.9	63057.3	69558.6
A0A8J8YP33	A0A8J8YP33	A0A8J8YP33_RAT	Haus2	Similar to Centrosomal protein of 27 kDa (Cep27 protein)	1	MLTEENHLHELDIVPPLPFLSK	MLTEENHLHELDIVPPLPFLSK	4	MLTEENHLHELDIVPPLPFLSK4	5772.71	7275.04	
A0A8I5ZXD6	D4A5F0;A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	0	MLTELLFELHVAATPDK	MLTELLFELHVAATPDK	3	MLTELLFELHVAATPDK3	5269.95	4656.8	
A0A8I5ZXD6	D4A5F0;A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	0	MLTELLFELHVAATPDKLNK	MLTELLFELHVAATPDKLNK	4	MLTELLFELHVAATPDKLNK4	9674.72	9777.36	
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	MLTEQGK	MLTEQGK	2	MLTEQGK2		153762	
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	MLTEQGKK	MLTEQGKK	2	MLTEQGKK2			9799.41
P04917	P04917	SRGN_RAT	Srgn	Serglycin	1	MLTEQNQEQPGDFII	MLTEQNQEQPGDFII	2	MLTEQNQEQPGDFII2	477106	549851	544001
P04917	P04917	SRGN_RAT	Srgn	Serglycin	1	MLTEQNQEQPGDFII	MLTEQNQEQPGDFII	3	MLTEQNQEQPGDFII3	4986.99	4699.78	4180.6
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	MLTFLMLVR	MLTFLMLVR	2	MLTFLMLVR2	2626.19	3896.04	5928.06
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	MLTFNPHKR	MLTFNPHKR	3	MLTFNPHKR3	10692.9	12576.5	14591.9
P21708	P21708	MK03_RAT	Mapk3	Mitogen-activated protein kinase 3	1	MLTFNPNK	MLTFNPNK	2	MLTFNPNK2	23089.7	28566.8	18599.6
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	MLTGPVYSQSTALTHK	MLTGPVYSQSTALTHK	2	MLTGPVYSQSTALTHK2	13325.6	14900.6	7176.38
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	MLTGPVYSQSTALTHK	MLTGPVYSQSTALTHK	3	MLTGPVYSQSTALTHK3	191121	212039	196787
Q5M9I5	Q5M9I5	QCR6_RAT	Uqcrh	Cytochrome b-c1 complex subunit 6, mitochondrial	1	MLTGSGDPK	MLTGSGDPK	2	MLTGSGDPK2	11494.4	9503.9	
Q5M9I5	Q5M9I5	QCR6_RAT	Uqcrh	Cytochrome b-c1 complex subunit 6, mitochondrial	1	MLTGSGDPKEEEEEELVDPLTTVR	MLTGSGDPKEEEEEELVDPLTTVR	3	MLTGSGDPKEEEEEELVDPLTTVR3	4711.83	3616.46	2830.57
D3Z8X6	D3Z8X6	D3Z8X6_RAT	Dtx3l	E3 ubiquitin-protein ligase	1	MLTLLGSAADIAAAAEK	MLTLLGSAADIAAAAEK	2	MLTLLGSAADIAAAAEK2		7208.53	
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	MLTNAMEVTGLDGNYR	MLTNAMEVTGLDGNYR	2	MLTNAMEVTGLDGNYR2	6016.3	4000.14	13011.4
A0A8I6AD67	A0A8I6AD67	A0A8I6AD67_RAT	Parp9	Poly [ADP-ribose] polymerase	1	MLTPGIELSVWK	MLTPGIELSVWK	2	MLTPGIELSVWK2	8274.55	7587.41	4108.82
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	MLTPPMGTVMDVLK	MLTPPMGTVMDVLK	2	MLTPPMGTVMDVLK2	303854	263565	276732
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	MLTPPMGTVMDVLK	MLTPPMGTVMDVLK	3	MLTPPMGTVMDVLK3	9187.93	8557.75	15896.9
A0A8I5ZKU9	A0A8I5ZKU9	A0A8I5ZKU9_RAT	Shmt1	Serine hydroxymethyltransferase	1	MLTQPLKESDAEVYSIIK	MLTQPLKESDAEVYSIIK	3	MLTQPLKESDAEVYSIIK3		4175.9	3521.36
A0A8I6ANL9	A0A8I6ANL9	A0A8I6ANL9_RAT	Cdc23	Cell division cycle 23	1	MLVALGECYEK	MLVALGEC(UniMod:4)YEK	2	MLVALGEC(UniMod:4)YEK2	18162	10907.9	15086.6
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	MLVDDIGDVTITNDGATILK	MLVDDIGDVTITNDGATILK	3	MLVDDIGDVTITNDGATILK3	31812.1	33851.2	41914.3
Q5M936	Q5M936	TOR3A_RAT	Tor3a	Torsin-3A	1	MLVDNLYR	MLVDNLYR	2	MLVDNLYR2	59144	54856.6	49209.7
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	MLVDVFAPEFR	MLVDVFAPEFR	2	MLVDVFAPEFR2	27121.4	25673.5	26029.2
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	MLVELSK	MLVELSK	1	MLVELSK1	2005.06	3653.86	2325.66
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	MLVELSK	MLVELSK	2	MLVELSK2	610237	597748	594552
P97887	O88777;P97887	PSN1_RAT	Psen1	Presenilin-1	0	MLVETAQER	MLVETAQER	2	MLVETAQER2	54563	47396.5	48161.1
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	MLVETSDLSTFCFHLR	MLVETSDLSTFC(UniMod:4)FHLR	3	MLVETSDLSTFC(UniMod:4)FHLR3	4554.59	3963.61	5972.02
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	MLVIEQCK	MLVIEQC(UniMod:4)K	2	MLVIEQC(UniMod:4)K2	661781	263419	474007
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	MLVIVVLPVR	MLVIVVLPVR	2	MLVIVVLPVR2	9341.66	11457.7	9194.4
Q5BK65	Q5BK65	LRC33_RAT	Nrros	Transforming growth factor beta activator LRRC33	1	MLVLDANPLR	MLVLDANPLR	2	MLVLDANPLR2	8755	2750.73	3517.61
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	MLVLDSDK	MLVLDSDK	2	MLVLDSDK2	591966	645246	653266
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	MLVLDSDKR	MLVLDSDKR	2	MLVLDSDKR2	60452.1	55718.7	52545.1
B2RZ78	B2RZ78	VPS29_RAT	Vps29	Vacuolar protein sorting-associated protein 29	1	MLVLVLGDLHIPHR	MLVLVLGDLHIPHR	3	MLVLVLGDLHIPHR3			5443.26
B2RZ78	B2RZ78	VPS29_RAT	Vps29	Vacuolar protein sorting-associated protein 29	1	MLVLVLGDLHIPHR	MLVLVLGDLHIPHR	4	MLVLVLGDLHIPHR4	41080.6	31531.1	30427.2
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	MLVNENEVK	MLVNENEVK	2	MLVNENEVK2	185978	162752	207314
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	MLVQCMQDQEHPSIR	MLVQC(UniMod:4)MQDQEHPSIR	3	MLVQC(UniMod:4)MQDQEHPSIR3	68220.4	68984.2	52225.8
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	MLVQLINQWK	MLVQLINQWK	2	MLVQLINQWK2	12032.2	3583.5	4058.6
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	MLVSAGGYLK	MLVSAGGYLK	2	MLVSAGGYLK2	14778	14310.9	18084.4
F7ELS2	A0A8I6AGL9;F7ELS2;Q6AYJ7;A0A8I6GM53	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	0	MLVSGAGDIK	MLVSGAGDIK	2	MLVSGAGDIK2	333204	368464	347631
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	MLVSYYR	MLVSYYR	2	MLVSYYR2		26188	33564.1
A0A0U1RRS5	A0A0U1RRS5	A0A0U1RRS5_RAT	Smg7	Nonsense-mediated mRNA decay factor	1	MLVTDLEYALDK	MLVTDLEYALDK	2	MLVTDLEYALDK2	7525.08		7871.6
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	MLVTFDEELRPLPVSVR	MLVTFDEELRPLPVSVR	3	MLVTFDEELRPLPVSVR3	305022	274846	254390
Q5HZY0	Q5HZY0	UBXN4_RAT	Ubxn4	UBX domain-containing protein 4	1	MLWFQGAIPAAIASAK	MLWFQGAIPAAIASAK	2	MLWFQGAIPAAIASAK2	17252.6	22483.2	26882.6
Q5HZY0	Q5HZY0	UBXN4_RAT	Ubxn4	UBX domain-containing protein 4	1	MLWFQGAIPAAIASAK	MLWFQGAIPAAIASAK	3	MLWFQGAIPAAIASAK3	10763.9	6399.79	10540
Q5RJR2	Q5RJR2;B0BMY7	TWF1_RAT	Twf1	Twinfilin-1	0	MLYAATR	MLYAATR	2	MLYAATR2	504601	396731	457493
D4ACS3	D4ACS3	D4ACS3_RAT	Mb21d2	Mab-21 domain containing 2	1	MLYDIVPVVSFK	MLYDIVPVVSFK	2	MLYDIVPVVSFK2	2466.31	3879.23	3597.55
Q5XI07	Q5XI07	LPP_RAT	Lpp	Lipoma-preferred partner homolog	1	MLYDMENPPADDYFGR	MLYDMENPPADDYFGR	2	MLYDMENPPADDYFGR2	28501.7	26383.4	25812.5
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	MLYLDFGGK	MLYLDFGGK	2	MLYLDFGGK2	86268.5	72343.7	54857.4
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	MLYPGSVYLLQK	MLYPGSVYLLQK	2	MLYPGSVYLLQK2	125572	117762	131462
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	MLYPGSVYLLQK	MLYPGSVYLLQK	3	MLYPGSVYLLQK3	4770.92	3064.57	2625.82
Q5RJR2	Q5RJR2;B0BMY7;A0A8I6GGS8	TWF1_RAT	Twf1	Twinfilin-1	0	MLYSSCK	MLYSSC(UniMod:4)K	2	MLYSSC(UniMod:4)K2	315432	246498	305636
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	MLYVPVMPGHAK	MLYVPVMPGHAK	2	MLYVPVMPGHAK2	10042.4	12542.7	4889.77
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	MLYVPVMPGHAK	MLYVPVMPGHAK	3	MLYVPVMPGHAK3	44367.7	39071.5	36877.2
O35094	O35094	TIM44_RAT	Timm44	Mitochondrial import inner membrane translocase subunit TIM44	1	MLYVWALCR	MLYVWALC(UniMod:4)R	2	MLYVWALC(UniMod:4)R2	13282.4	6414.07	9422.23
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	MLYYGENQELGPEEIAEK	MLYYGENQELGPEEIAEK	3	MLYYGENQELGPEEIAEK3	15373.3	20840.6	9832.04
Q62651	Q62651	ECH1_RAT	Ech1	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial	1	MMADEALDSGLVSR	MMADEALDSGLVSR	2	MMADEALDSGLVSR2	14650.3	14785	20491.8
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	MMALQTDIVDLQR	MMALQTDIVDLQR	2	MMALQTDIVDLQR2	12511.6	19079.5	22290.2
P10760	P10760	SAHH_RAT	Ahcy	Adenosylhomocysteinase	1	MMANGILK	MMANGILK	2	MMANGILK2	13976.4	7943.31	9248.65
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	MMASFLYK	MMASFLYK	2	MMASFLYK2	159042	126721	101212
A0A0G2K762	A0A0G2K762	A0A0G2K762_RAT	Abcf2	ATP binding cassette subfamily F member 2	1	MMASGLTER	MMASGLTER	2	MMASGLTER2	9157.48		10268
A0A8I6A6S4	A0A8I6A6S4	A0A8I6A6S4_RAT	Stim2	Stromal interaction molecule 2	1	MMDEINYAK	MMDEINYAK	2	MMDEINYAK2	18707.5	12588.1	13003.9
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	MMDLEDVIPLDCCR	MMDLEDVIPLDC(UniMod:4)C(UniMod:4)R	2	MMDLEDVIPLDC(UniMod:4)C(UniMod:4)R2	35643.4	25958.4	35597.1
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	MMDLEDVIPLDCCR	MMDLEDVIPLDC(UniMod:4)C(UniMod:4)R	3	MMDLEDVIPLDC(UniMod:4)C(UniMod:4)R3	4604	1878.34	3837.85
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	MMDQIEK	MMDQIEK	2	MMDQIEK2	57370.4	73668.6	89420.2
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	MMDVTVTIK	MMDVTVTIK	2	MMDVTVTIK2	21980.7	12805.7	12900.3
P97694	P63035;P97694	CYH1_RAT	Cyth1	Cytohesin-1	0	MMEAFAQR	MMEAFAQR	2	MMEAFAQR2	24796.4	26724.2	35831.6
P97696	P97696	CYH3_RAT	Cyth3	Cytohesin-3	1	MMEAFASR	MMEAFASR	2	MMEAFASR2	10001.8		18143.6
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	MMEEFVPHSK	MMEEFVPHSK	2	MMEEFVPHSK2	45344.3	51889.3	51526.8
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	MMEEFVPHSK	MMEEFVPHSK	3	MMEEFVPHSK3	144370	190450	181735
P49242	P49242;M0R6L4	RS3A_RAT	Rps3a	Small ribosomal subunit protein eS1	0	MMEIMTR	MMEIMTR	2	MMEIMTR2	41170.6	45339.7	45069.6
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	MMELSNEVMSPHGEPIK	MMELSNEVMSPHGEPIK	2	MMELSNEVMSPHGEPIK2	10863.2	13749.6	4890.54
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	MMELSNEVMSPHGEPIK	MMELSNEVMSPHGEPIK	3	MMELSNEVMSPHGEPIK3	80695.1	90313.6	83817.5
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	MMEMFGLVEK	MMEMFGLVEK	2	MMEMFGLVEK2	35089.6	34146	23904.5
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	MMEMQAK	MMEMQAK	2	MMEMQAK2	41511.8	40682.3	39815.1
F1LNS2	F1LNS2	F1LNS2_RAT	Dennd10	DENN domain containing 10	1	MMESYIAVLTK	MMESYIAVLTK	2	MMESYIAVLTK2	2313.48	5132.25	
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	MMETFQQLITYK	MMETFQQLITYK	2	MMETFQQLITYK2	12937	11112.9	10762.9
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	MMEVPYVDR	MMEVPYVDR	2	MMEVPYVDR2	2.8e+07	2.69445e+07	3.05889e+07
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	MMEVPYVDR	MMEVPYVDR	3	MMEVPYVDR3	57643	50568.8	41338.1
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	MMEVPYVDRNTCR	MMEVPYVDRNTC(UniMod:4)R	3	MMEVPYVDRNTC(UniMod:4)R3	200362	309397	304998
O54857	O54857	PTEN_RAT	Pten	Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN	1	MMFETIPMFSGGTCNPQFVVCQLK	MMFETIPMFSGGTC(UniMod:4)NPQFVVC(UniMod:4)QLK	3	MMFETIPMFSGGTC(UniMod:4)NPQFVVC(UniMod:4)QLK3	10191.3	11539	
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	MMFTGNSQTALK	MMFTGNSQTALK	2	MMFTGNSQTALK2	225057	274284	190162
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	MMGFFFPGR	MMGFFFPGR	2	MMGFFFPGR2	5316.44	12726.7	6274.6
A0A0G2K427	A0A0G2K427	A0A0G2K427_RAT	Ivns1abp	Influenza virus NS1A binding protein	1	MMGNMTSPR	MMGNMTSPR	2	MMGNMTSPR2	4993.12	10199.7	6544.47
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	MMHSNMETLYK	MMHSNMETLYK	2	MMHSNMETLYK2	29449.2	25121.7	32216.3
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	MMHSNMETLYK	MMHSNMETLYK	3	MMHSNMETLYK3	70363.4	67468.9	75490.3
Q6PEC1	Q6PEC1	TBCA_RAT	Tbca	Tubulin-specific chaperone A	1	MMIPDCQR	MMIPDC(UniMod:4)QR	2	MMIPDC(UniMod:4)QR2	119896	87918.4	102851
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	MMLDHCLELQLFHR	MMLDHC(UniMod:4)LELQLFHR	2	MMLDHC(UniMod:4)LELQLFHR2	1772.9	4928.27	1060.25
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	MMLDHCLELQLFHR	MMLDHC(UniMod:4)LELQLFHR	3	MMLDHC(UniMod:4)LELQLFHR3	80133.4	71291.4	46539
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	MMLDHCLELQLFHR	MMLDHC(UniMod:4)LELQLFHR	4	MMLDHC(UniMod:4)LELQLFHR4	91535.8	107039	105951
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	MMLDLNK	MMLDLNK	2	MMLDLNK2	63755.3	58382.5	58054.6
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	MMLENLQQR	MMLENLQQR	2	MMLENLQQR2	78499.1	84853.3	86024.8
Q6AXX6	Q6AXX6	PXL2A_RAT	Prxl2a	Peroxiredoxin-like 2A	1	MMLMGLVR	MMLMGLVR	2	MMLMGLVR2	57397.4	47044.4	43650.4
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	MMMVQNASDLLIKPLETFR	MMMVQNASDLLIKPLETFR	3	MMMVQNASDLLIKPLETFR3	24398.8	26972.2	24181.4
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	MMMVQNASDLLIKPLETFRK	MMMVQNASDLLIKPLETFRK	4	MMMVQNASDLLIKPLETFRK4	8207.66	8460.89	9091.06
O88767	O88767	PARK7_RAT	Park7	Parkinson disease protein 7 homolog	1	MMNGSHYSYSESR	MMNGSHYSYSESR	3	MMNGSHYSYSESR3	8579.41	11301.4	8885.08
P50878	A0A8I6AL38;A0A8I6ASF5;P50878	RL4_RAT	Rpl4	Large ribosomal subunit protein uL4	0	MMNTDLSR	MMNTDLSR	2	MMNTDLSR2	29349.2	34049.3	46437.8
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	MMNTIIFHTK	MMNTIIFHTK	2	MMNTIIFHTK2	13420.7	14435.1	10794.7
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	MMNTIIFHTK	MMNTIIFHTK	3	MMNTIIFHTK3	69342.9	63163.3	74488.1
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	MMPASQFFK	MMPASQFFK	2	MMPASQFFK2	25145.8	26803.5	18839.5
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	MMPECQCPPHMTGPR	MMPEC(UniMod:4)QC(UniMod:4)PPHMTGPR	3	MMPEC(UniMod:4)QC(UniMod:4)PPHMTGPR3	22338	21456.4	17502.1
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	MMQAEEAPK	MMQAEEAPK	2	MMQAEEAPK2	132289	143011	132464
G3V9T7	G3V9T7	GET3_RAT	Get3	ATPase Get3	1	MMQEAMSAFPGIDEAMSYAEVMR	MMQEAMSAFPGIDEAMSYAEVMR	3	MMQEAMSAFPGIDEAMSYAEVMR3	22248.2	25598.3	19447.6
Q5U2V8	Q5U2V8	EMC3_RAT	Emc3	ER membrane protein complex subunit 3	1	MMQEQMTGAAMAMPADTNK	MMQEQMTGAAMAMPADTNK	3	MMQEQMTGAAMAMPADTNK3	18603.3	18251.4	13162.6
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	MMRPVSDQVQIK	MMRPVSDQVQIK	2	MMRPVSDQVQIK2	2021.92	1667.29	
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	MMRPVSDQVQIK	MMRPVSDQVQIK	3	MMRPVSDQVQIK3	31049.6	31356.8	26228.8
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	MMSHCNLWDNHHPETPQR	MMSHC(UniMod:4)NLWDNHHPETPQR	4	MMSHC(UniMod:4)NLWDNHHPETPQR4	28247.3	21826.8	17561.9
G3V783	G3V783	G3V783_RAT	Ripk2	Receptor-interacting serine/threonine-protein kinase 2	1	MMSLSQSR	MMSLSQSR	2	MMSLSQSR2	7258.16	8641.43	10497
Q9QZK5	Q9QZK5	HTRA1_RAT	Htra1	Serine protease HTRA1	1	MMSLTSSK	MMSLTSSK	2	MMSLTSSK2	29917.6	29006.3	26607.8
Q8VHI8	Q8VHI8	SEC20_RAT	Bnip1	Vesicle transport protein SEC20	1	MMSQQVQQSEEAMQTLVSSSR	MMSQQVQQSEEAMQTLVSSSR	3	MMSQQVQQSEEAMQTLVSSSR3	14642.6	10541.8	11383.9
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	MMSVAALVVNFSQPVAGRPSLLR	MMSVAALVVNFSQPVAGRPSLLR	3	MMSVAALVVNFSQPVAGRPSLLR3	9821.57	2469.89	3409.94
Q5M936	Q5M936	TOR3A_RAT	Tor3a	Torsin-3A	1	MMTYVPEEEQLFSSQGCK	MMTYVPEEEQLFSSQGC(UniMod:4)K	3	MMTYVPEEEQLFSSQGC(UniMod:4)K3	11319.2	9765.47	14582.7
Q6IMY8	Q6IMY8	HNRPU_RAT	Hnrnpu	Heterogeneous nuclear ribonucleoprotein U	1	MMVAGFK	MMVAGFK	2	MMVAGFK2	3451.48		
A0A8I6A678	A0A8I6A678	A0A8I6A678_RAT	Snx2	Sorting nexin-2	1	MMVANKPDK	MMVANKPDK	2	MMVANKPDK2		8263.88	
Q08406	Q08406	CNTFR_RAT	Cntfr	Ciliary neurotrophic factor receptor subunit alpha	1	MMVCEKDPALK	MMVC(UniMod:4)EKDPALK	3	MMVC(UniMod:4)EKDPALK3	8635.18	5059.39	7838.92
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	MMVDKDGDVTVTNDGATILSMMDVDHQIAK	MMVDKDGDVTVTNDGATILSMMDVDHQIAK	4	MMVDKDGDVTVTNDGATILSMMDVDHQIAK4	67105.7	87302.4	47875
P63100	P28470;P63100	CANB1_RAT	Ppp3r1	Calcineurin subunit B type 1	0	MMVGNNLK	MMVGNNLK	2	MMVGNNLK2	263580	246378	212528
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	MMVMVTASGK	MMVMVTASGK	2	MMVMVTASGK2	32622.7	16029.3	22798.4
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	MMVQDLITALDHSHPQHYTQAMFK	MMVQDLITALDHSHPQHYTQAMFK	4	MMVQDLITALDHSHPQHYTQAMFK4	3656.92	4800.06	4064.61
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	MMYGVSPWGDAPIDFENSAHVPCPR	MMYGVSPWGDAPIDFENSAHVPC(UniMod:4)PR	3	MMYGVSPWGDAPIDFENSAHVPC(UniMod:4)PR3	11027.1	15677.9	
P23711	P23711	HMOX2_RAT	Hmox2	Heme oxygenase 2	1	MNALDLSMK	MNALDLSMK	2	MNALDLSMK2	41155.2	29537.1	53387.4
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	MNALNEVNK	MNALNEVNK	2	MNALNEVNK2	118195	111107	125404
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	MNALSEVR	MNALSEVR	2	MNALSEVR2		65000.2	54382.4
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	MNCNVCDDFDLCYGCYAAK	MNC(UniMod:4)NVC(UniMod:4)DDFDLC(UniMod:4)YGC(UniMod:4)YAAK	3	MNC(UniMod:4)NVC(UniMod:4)DDFDLC(UniMod:4)YGC(UniMod:4)YAAK3	5095.67	4491.4	5971.52
Q63484	Q63484	AKT3_RAT	Akt3	RAC-gamma serine/threonine-protein kinase	1	MNCSPTSQIDNIGEEEMDASTTHHK	MNC(UniMod:4)SPTSQIDNIGEEEMDASTTHHK	4	MNC(UniMod:4)SPTSQIDNIGEEEMDASTTHHK4	3863.88	6698.24	
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	MNDFYILDR	MNDFYILDR	2	MNDFYILDR2	170912	174931	167661
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	MNDFYILDRDSFFNPATR	MNDFYILDRDSFFNPATR	3	MNDFYILDRDSFFNPATR3	61738.2	72205.4	68555.7
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	MNDHPDGPSFNR	MNDHPDGPSFNR	2	MNDHPDGPSFNR2	8980.4	11906.5	5443.9
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	MNDHPDGPSFNR	MNDHPDGPSFNR	3	MNDHPDGPSFNR3	113079	103950	113000
P70645	P70645	BLMH_RAT	Blmh	Bleomycin hydrolase	1	MNDILNHK	MNDILNHK	2	MNDILNHK2	9111.01	6052.96	7106.1
Q64573	Q64573;Q63010	EST1F_RAT	Ces1f	Liver carboxylesterase 1F	0	MNDLLTNR	MNDLLTNR	2	MNDLLTNR2	6977.5	6009.46	4751.18
F7FLB2	F7FLB2	F7FLB2_RAT	Pgm2	phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	1	MNDLTIIQTTQGFCR	MNDLTIIQTTQGFC(UniMod:4)R	2	MNDLTIIQTTQGFC(UniMod:4)R2	5259.65	4019.6	2235.47
A0A0G2JVY4	A0A0G2JVY4	A0A0G2JVY4_RAT	Tmem63a	Transmembrane protein 63a	1	MNDSLTER	MNDSLTER	2	MNDSLTER2	10990.5	11935.9	17195.4
P70550	P70550	RAB8B_RAT	Rab8b	Ras-related protein Rab-8B	1	MNDSNSSGAGGPVK	MNDSNSSGAGGPVK	2	MNDSNSSGAGGPVK2	100362	88167.2	91304.6
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	MNDVYGPMSQILETLSK	MNDVYGPMSQILETLSK	2	MNDVYGPMSQILETLSK2	8445.61	9056.44	7887.34
F1M332	F1M332	F1M332_RAT	Arhgap28	Rho GTPase activating protein 28	1	MNEATMLLK	MNEATMLLK	2	MNEATMLLK2	12504.4	10638.8	10701.5
Q8CIN9	Q8CIN9	RFFL_RAT	Rffl	E3 ubiquitin-protein ligase rififylin	1	MNECPICR	MNEC(UniMod:4)PIC(UniMod:4)R	2	MNEC(UniMod:4)PIC(UniMod:4)R2	12782.2	10881.5	8303.24
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	MNEPPTSLGLVPHQIR	MNEPPTSLGLVPHQIR	3	MNEPPTSLGLVPHQIR3	32744.5	42113.8	34138.3
A0A8I6A678	A0A8I6A678	A0A8I6A678_RAT	Snx2	Sorting nexin-2	1	MNESDAWFEEK	MNESDAWFEEK	2	MNESDAWFEEK2	17285.1	13189	10235.5
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	MNESDIWFEEK	MNESDIWFEEK	2	MNESDIWFEEK2	59345.2	62505.2	57710.8
Q63942	Q63942	RAB3D_RAT	Rab3d	GTP-binding protein Rab-3D	1	MNESLEPSSSPGSNGK	MNESLEPSSSPGSNGK	2	MNESLEPSSSPGSNGK2	51889.2	44602.2	43847.2
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	MNEVEQVLSPGMLLR	MNEVEQVLSPGMLLR	2	MNEVEQVLSPGMLLR2	65282.3	48972.5	82127.8
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	MNEVEQVLSPGMLLR	MNEVEQVLSPGMLLR	3	MNEVEQVLSPGMLLR3	260394	303697	211316
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	MNEVISLWK	MNEVISLWK	2	MNEVISLWK2	343332	369157	392681
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	MNEVMDLAHTFLQNFCR	MNEVMDLAHTFLQNFC(UniMod:4)R	3	MNEVMDLAHTFLQNFC(UniMod:4)R3		8569.29	8135.96
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	MNFAEEEPSK	MNFAEEEPSK	2	MNFAEEEPSK2	1778.54	2870.49	
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	MNFAEEEPSKK	MNFAEEEPSKK	3	MNFAEEEPSKK3	2118.08		
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	MNFANVFIGANPLAVDLLEK	MNFANVFIGANPLAVDLLEK	3	MNFANVFIGANPLAVDLLEK3	4388.51		
G3V9W0	G3V9W0	G3V9W0_RAT	Cetn2	Centrin 2	1	MNFSDFLTVMTQK	MNFSDFLTVMTQK	2	MNFSDFLTVMTQK2	2774.52	3774.82	2617.68
G3V9W0	G3V9W0	G3V9W0_RAT	Cetn2	Centrin 2	1	MNFSDFLTVMTQK	MNFSDFLTVMTQK	3	MNFSDFLTVMTQK3	934.335	3402.34	
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	MNGFIDQIDGIVHFETR	MNGFIDQIDGIVHFETR	3	MNGFIDQIDGIVHFETR3	18277.3	16351.7	13299.7
Q9EPH8	D4A233;D3ZSR2;Q9EPH8;G3V9N0	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	0	MNGMLLNDR	MNGMLLNDR	2	MNGMLLNDR2	19285.9	7650.13	6932.75
Q9EPH8	D4A233;D3ZSR2;Q9EPH8;G3V9N0	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	0	MNGMLLNDRK	MNGMLLNDRK	3	MNGMLLNDRK3	7620.91	10279	18702.7
P20760	P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	1	MNGQPQENYK	MNGQPQENYK	2	MNGQPQENYK2	1.19297e+06	1.04898e+06	1.10382e+06
D4AD37	D4AD37	IMPA3_RAT	Bpnt2	Golgi-resident adenosine 3',5'-bisphosphate 3'-phosphatase	1	MNHQALVR	MNHQALVR	2	MNHQALVR2	19422.1	13898.2	21115.8
P0CE43	P0CE43	GRB10_RAT	Grb10	Growth factor receptor-bound protein 10	1	MNILSSQSPLHPSTLNSVIHR	MNILSSQSPLHPSTLNSVIHR	3	MNILSSQSPLHPSTLNSVIHR3	17605.7	7386.48	11753.9
P0CE43	P0CE43	GRB10_RAT	Grb10	Growth factor receptor-bound protein 10	1	MNILSSQSPLHPSTLNSVIHR	MNILSSQSPLHPSTLNSVIHR	4	MNILSSQSPLHPSTLNSVIHR4	10771.8	7945.15	7056.41
Q08603	Q08603	PGTB2_RAT	Rabggtb	Geranylgeranyl transferase type-2 subunit beta	1	MNKEEILVFIK	MNKEEILVFIK	3	MNKEEILVFIK3	1779.13	3374.67	3626.89
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	MNLAIALTAAR	MNLAIALTAAR	2	MNLAIALTAAR2	175268	173669	154321
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	MNLASEPQEVLHIGSAHNR	MNLASEPQEVLHIGSAHNR	3	MNLASEPQEVLHIGSAHNR3	229861	188962	165584
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	MNLASEPQEVLHIGSAHNR	MNLASEPQEVLHIGSAHNR	4	MNLASEPQEVLHIGSAHNR4	708316	658126	633517
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	MNLASSFVNGFVNAAFGQDK	MNLASSFVNGFVNAAFGQDK	3	MNLASSFVNGFVNAAFGQDK3	11306.7		
P00507	P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	1	MNLGVGAYR	MNLGVGAYR	2	MNLGVGAYR2	250368	247643	274271
P00507	P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	1	MNLGVGAYRDDNGKPYVLPSVR	MNLGVGAYRDDNGKPYVLPSVR	4	MNLGVGAYRDDNGKPYVLPSVR4	4526.57	10600.1	16242.6
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	MNLHLVLIEELHR	MNLHLVLIEELHR	3	MNLHLVLIEELHR3		1540.71	3528.27
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	MNLHLVLIEELHR	MNLHLVLIEELHR	4	MNLHLVLIEELHR4	6297.42	10393	4998.35
Q5FVJ0	Q5FVJ0	RUFY3_RAT	Rufy3	Protein RUFY3	1	MNLMNMAK	MNLMNMAK	2	MNLMNMAK2	4973.16	8368.87	7651.54
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	MNLMTPEALGK	MNLMTPEALGK	2	MNLMTPEALGK2	17125.6	14640.5	22788.8
P97690	P97690	SMC3_RAT	Smc3	Structural maintenance of chromosomes protein 3	1	MNLPGEVTFLPLNK	MNLPGEVTFLPLNK	2	MNLPGEVTFLPLNK2	4035.82		2083.76
P01015	P01015	ANGT_RAT	Agt	Angiotensinogen	1	MNLPLEGVSTDSTLFFNTYVHFQGK	MNLPLEGVSTDSTLFFNTYVHFQGK	3	MNLPLEGVSTDSTLFFNTYVHFQGK3	23954.7	27807.5	20261.5
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	MNLPTGPDTLCFDK	MNLPTGPDTLC(UniMod:4)FDK	2	MNLPTGPDTLC(UniMod:4)FDK2		1461.9	
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	MNLPTGPDTLCFDKDEFMK	MNLPTGPDTLC(UniMod:4)FDKDEFMK	3	MNLPTGPDTLC(UniMod:4)FDKDEFMK3	29507.7	36402.9	26937.6
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	MNLQTGVNEVK	MNLQTGVNEVK	2	MNLQTGVNEVK2	116165	117564	106269
Q66HA6	D3ZPP2;Q66HA6	ARL8B_RAT	Arl8b	ADP-ribosylation factor-like protein 8B	0	MNLSAIQDR	MNLSAIQDR	2	MNLSAIQDR2	249115	228652	388355
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	MNLSDVELIPLPLEPQVK	MNLSDVELIPLPLEPQVK	3	MNLSDVELIPLPLEPQVK3	8292.93	9743.67	6987.3
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	MNLSEEVDLEDYVARPDK	MNLSEEVDLEDYVARPDK	3	MNLSEEVDLEDYVARPDK3	83356.6	75732.9	69514.8
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	MNLYGFHEGR	MNLYGFHEGR	2	MNLYGFHEGR2	37836.9	51897.2	43481.4
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	MNLYGFHEGR	MNLYGFHEGR	3	MNLYGFHEGR3	247294	259259	222004
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	MNLYGFHEGRR	MNLYGFHEGRR	3	MNLYGFHEGRR3	47533.5	149514	95982.3
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	MNLYGIHSGQR	MNLYGIHSGQR	2	MNLYGIHSGQR2	31547.5	48841.3	34888.3
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	MNLYGIHSGQR	MNLYGIHSGQR	3	MNLYGIHSGQR3	168488	245555	210886
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	MNLYGLR	MNLYGLR	2	MNLYGLR2	19952	21467.1	18983.6
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	MNLYGLYGR	MNLYGLYGR	2	MNLYGLYGR2	17379.6	29337.5	14733.7
D3ZBE5	D3ZBE5	NEK7_RAT	Nek7	Serine/threonine-protein kinase Nek7	1	MNLYSLCK	MNLYSLC(UniMod:4)K	2	MNLYSLC(UniMod:4)K2	2287.36	3179.37	2166.56
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	MNMANQSLK	MNMANQSLK	2	MNMANQSLK2	50264.3	47301	58348.6
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	MNNCLSQMEQFPVK	MNNC(UniMod:4)LSQMEQFPVK	2	MNNC(UniMod:4)LSQMEQFPVK2	6005.63	5401.91	3679.21
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	MNNTLRK	MNNTLRK	2	MNNTLRK2			21735.5
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	MNNTNLAVVFGPNLLWAK	MNNTNLAVVFGPNLLWAK	3	MNNTNLAVVFGPNLLWAK3	21781.5	14679.4	13440.3
P10536	A0A8I6ARI7;A0A8I6A3Z4;P10536;A0A8I6ATH8;A0A8I6AT03	RAB1B_RAT	Rab1b	Ras-related protein Rab-1B	0	MNPEYDYLFK	MNPEYDYLFK	2	MNPEYDYLFK2	9626.53	6038.7	6252.32
Q99MZ8	Q99MZ8	LASP1_RAT	Lasp1	LIM and SH3 domain protein 1	1	MNPNCAR	MNPNC(UniMod:4)AR	2	MNPNC(UniMod:4)AR2			10554.2
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	MNPPHPETGNVQDSQVCFSR	MNPPHPETGNVQDSQVC(UniMod:4)FSR	3	MNPPHPETGNVQDSQVC(UniMod:4)FSR3	25897.2	23707.8	22069.1
Q62812	Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	MNPPKFSKVEDMAELTCLNEASVLHNLK	MNPPKFSKVEDMAELTC(UniMod:4)LNEASVLHNLK	4	MNPPKFSKVEDMAELTC(UniMod:4)LNEASVLHNLK4	96970	186781	154032
P11915	P11915	SCP2_RAT	Scp2	Sterol carrier protein 2	1	MNPQSAFFQGK	MNPQSAFFQGK	2	MNPQSAFFQGK2	290221	267412	262129
Q11205	Q11205	SIA4B_RAT	St3gal2	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2	1	MNQAPTVGFEK	MNQAPTVGFEK	2	MNQAPTVGFEK2	20232.3	14450.3	26029.5
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	MNQEDFQSR	MNQEDFQSR	2	MNQEDFQSR2	5590.68		3459
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	MNQEDFQSRPILELK	MNQEDFQSRPILELK	3	MNQEDFQSRPILELK3	18413.1	18658.1	28300.5
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	MNSDSEELTQR	MNSDSEELTQR	2	MNSDSEELTQR2	119831	106058	128993
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	MNSDSEELTQR	MNSDSEELTQR	3	MNSDSEELTQR3	3054.23	4765.17	6346.75
Q5Y4N8	Q5Y4N8	AGRE1_RAT	Adgre1	Adhesion G protein-coupled receptor E2	1	MNSHVVGGTVTGER	MNSHVVGGTVTGER	3	MNSHVVGGTVTGER3	17914.2	16079.3	20283.1
Q63787	Q63789;Q63787	P85A_RAT	Pik3r1	Phosphatidylinositol 3-kinase regulatory subunit alpha	0	MNSIKPDLIQLR	MNSIKPDLIQLR	3	MNSIKPDLIQLR3	20611.9	27651.5	26672.4
A0A8I6G6W8	A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	1	MNSIVYQK	MNSIVYQK	2	MNSIVYQK2	5709.77	9464.12	4077.02
Q8K1Q0	Q8K1Q0	NMT1_RAT	Nmt1	Glycylpeptide N-tetradecanoyltransferase 1	1	MNSLPAER	MNSLPAER	2	MNSLPAER2	34430.4	28141.8	17888.7
A0A8I6AC29	A0A8I6AC29	A0A8I6AC29_RAT	ENSRNOG00000066281	Ig-like domain-containing protein	1	MNSLQPEDTGTYYCAR	MNSLQPEDTGTYYC(UniMod:4)AR	2	MNSLQPEDTGTYYC(UniMod:4)AR2	108223	103875	108027
A0A8I6AC29	A0A8I6AC29	A0A8I6AC29_RAT	ENSRNOG00000066281	Ig-like domain-containing protein	1	MNSLQPEDTGTYYCAR	MNSLQPEDTGTYYC(UniMod:4)AR	3	MNSLQPEDTGTYYC(UniMod:4)AR3	5431.09	4467.28	3919.41
A0A8I5ZMX9	A0A8I5ZMX9;A0A8I6ARZ2	A0A8I5ZMX9_RAT	ENSRNOG00000063638	Ig-like domain-containing protein	0	MNSLQTDDTAIYYCTR	MNSLQTDDTAIYYC(UniMod:4)TR	2	MNSLQTDDTAIYYC(UniMod:4)TR2	3310.27	3498.94	4415.9
A0A8I6A6J2	A0A8I6A6J2	A0A8I6A6J2_RAT	LOC100359793	Ig-like domain-containing protein	1	MNSLQTEDTAIYLCAR	MNSLQTEDTAIYLC(UniMod:4)AR	2	MNSLQTEDTAIYLC(UniMod:4)AR2	7764.26	10118.7	9392.88
A0A8I6A6J2	A0A8I6A6J2	A0A8I6A6J2_RAT	LOC100359793	Ig-like domain-containing protein	1	MNSLQTEDTAIYLCAR	MNSLQTEDTAIYLC(UniMod:4)AR	3	MNSLQTEDTAIYLC(UniMod:4)AR3	5203.74		3684.58
A0A8I6AFC6;A0A8I6ANM0	A0A8I6AFC6;A0A8I6ANM0	A0A8I6AFC6_RAT;A0A8I6ANM0_RAT	ENSRNOG00000068022;ENSRNOG00000070406	Ig-like domain-containing protein	0	MNSLQTEDTAIYYCTR	MNSLQTEDTAIYYC(UniMod:4)TR	3	MNSLQTEDTAIYYC(UniMod:4)TR3	6682.13	9223.92	3988.53
A0A8I5ZPC5	A0A8I5ZPC5	A0A8I5ZPC5_RAT	ENSRNOG00000065156	Ig-like domain-containing protein	1	MNSLQTEDTAMYFCAR	MNSLQTEDTAMYFC(UniMod:4)AR	2	MNSLQTEDTAMYFC(UniMod:4)AR2	109485	94531.6	104930
A0A8I5ZPC5	A0A8I5ZPC5	A0A8I5ZPC5_RAT	ENSRNOG00000065156	Ig-like domain-containing protein	1	MNSLQTEDTAMYFCAR	MNSLQTEDTAMYFC(UniMod:4)AR	3	MNSLQTEDTAMYFC(UniMod:4)AR3	122783	94156.8	108561
A0A8I5ZWC4	A0A8I5ZS25;A0A8I5ZWC4	A0A8I5ZWC4_RAT	ENSRNOG00000062609	Ig-like domain-containing protein	0	MNSLQTEDTATYYCAR	MNSLQTEDTATYYC(UniMod:4)AR	2	MNSLQTEDTATYYC(UniMod:4)AR2	10719.1	7030.56	14338.9
A0A8I5ZWC4	A0A8I5ZS25;A0A8I5ZWC4	A0A8I5ZWC4_RAT	ENSRNOG00000062609	Ig-like domain-containing protein	0	MNSLQTEDTATYYCAR	MNSLQTEDTATYYC(UniMod:4)AR	3	MNSLQTEDTATYYC(UniMod:4)AR3	11458.6	18542.3	9358.19
A0A8I6AI98	A0A8I6AI98	A0A8I6AI98_RAT	ENSRNOG00000070565	Ig-like domain-containing protein	1	MNSLQTEDTGTYYCAR	MNSLQTEDTGTYYC(UniMod:4)AR	2	MNSLQTEDTGTYYC(UniMod:4)AR2	40248.9	37561.8	55825.7
A0A8I6AI98	A0A8I6AI98	A0A8I6AI98_RAT	ENSRNOG00000070565	Ig-like domain-containing protein	1	MNSLQTEDTGTYYCAR	MNSLQTEDTGTYYC(UniMod:4)AR	3	MNSLQTEDTGTYYC(UniMod:4)AR3	20221.6	17490.5	21335.8
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	MNSLTFK	MNSLTFK	2	MNSLTFK2	42829.6	51936.5	31147.9
D4A7Z5	F7F5S4;D4A7Z5	D4A7Z5_RAT	LOC100360940	Direct IAP-binding protein with low pI	0	MNSQEEDEVWQVIIGAR	MNSQEEDEVWQVIIGAR	3	MNSQEEDEVWQVIIGAR3		8411.04	
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	MNSSFSVKPSEK	MNSSFSVKPSEK	3	MNSSFSVKPSEK3	13091.7	19447.1	18336
A0A8I6GIE0	A0A8I6GIE0	A0A8I6GIE0_RAT	Armh4	Armadillo-like helical domain containing 4	1	MNTDDQENISFAPK	MNTDDQENISFAPK	2	MNTDDQENISFAPK2	1337.32		2826.05
B5DF86	B5DF86	B5DF86_RAT	Cog8	Conserved oligomeric Golgi complex subunit 8	1	MNTLTLNR	MNTLTLNR	2	MNTLTLNR2	21967.1	19621.7	20298.6
A0A8I5ZRT6	A0A8I5ZRT6	A0A8I5ZRT6_RAT	Dock2	Dedicator of cytokinesis 2	1	MNTTSAPGDDVK	MNTTSAPGDDVK	2	MNTTSAPGDDVK2	2044.46	2796.18	
D3ZF12	D3ZF12	D3ZF12_RAT	Spcs3	Signal peptidase complex subunit 3	1	MNTVLSR	MNTVLSR	2	MNTVLSR2	273307	236654	255910
Q5BJU0	Q5BJU0	Q5BJU0_RAT	Rras2	RAS related 2	1	MNVDQAFHELVR	MNVDQAFHELVR	3	MNVDQAFHELVR3	26615.8	22806.7	24572.6
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	MNVFDTDLK	MNVFDTDLK	2	MNVFDTDLK2	1.30787e+06	1.37862e+06	1.41367e+06
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	MNVFDTELK	MNVFDTELK	2	MNVFDTELK2	264687	247189	219831
A0A0G2K2F6	A0A0G2K2F6	A0A0G2K2F6_RAT	Rps15a-ps3	40S ribosomal protein S15a	1	MNVLADAIK	MNVLADAIK	2	MNVLADAIK2	63057.9		47297.6
P62246	D3ZLL8;A0A0G2K6I0;P62246;M0R8U6;D3ZZC7	RS15A_RAT	Rps15a	Small ribosomal subunit protein uS8	0	MNVLADALK	MNVLADALK	2	MNVLADALK2		29067.7	
D3ZUM4	D3ZUM4	D3ZUM4_RAT	Glb1	Beta-galactosidase	1	MNVLNIR	MNVLNIR	2	MNVLNIR2	27765.7	31786.6	30162
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	MNVSPDVNYEELAR	MNVSPDVNYEELAR	2	MNVSPDVNYEELAR2	221578	185154	221330
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	MNVVFAVK	MNVVFAVK	2	MNVVFAVK2	3195.56		
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	MNYFQVAK	MNYFQVAK	2	MNYFQVAK2	38010.6	38747.6	44736.6
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	MNYLVLEEDVDDDPCK	MNYLVLEEDVDDDPC(UniMod:4)K	2	MNYLVLEEDVDDDPC(UniMod:4)K2	51564.2	50537.6	49729.1
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	MNYLVLEEDVDDDPCK	MNYLVLEEDVDDDPC(UniMod:4)K	3	MNYLVLEEDVDDDPC(UniMod:4)K3		3039.18	3931.17
F1LPV0	F1LPV0	F1LPV0_RAT	Nars1	asparagine--tRNA ligase	1	MNYSDAIEWLR	MNYSDAIEWLR	2	MNYSDAIEWLR2	22898	18908.9	13454.7
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	MNYSGDQGQTIR	MNYSGDQGQTIR	2	MNYSGDQGQTIR2	27023.3	32667.2	27847.7
P97584	P97584	PTGR1_RAT	Ptgr1	Prostaglandin reductase 1	1	MPAAFMGMLK	MPAAFMGMLK	2	MPAAFMGMLK2	9237.16	2161.48	2063.37
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	MPAASTCCGDEK	MPAASTC(UniMod:4)C(UniMod:4)GDEK	2	MPAASTC(UniMod:4)C(UniMod:4)GDEK2	24404.2	26691.7	23576
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	MPAISDQDMNAYLAEQSR	MPAISDQDMNAYLAEQSR	3	MPAISDQDMNAYLAEQSR3	34157.7	40455.7	43537.2
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	MPASGWYK	MPASGWYK	1	MPASGWYK1	7144.39	6767.37	7569.37
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	MPASGWYK	MPASGWYK	2	MPASGWYK2	638204	734580	742229
A0A8I5ZUI2	A0A8I5ZUI2	A0A8I5ZUI2_RAT	Ano10	Anoctamin	1	MPATLPQPELR	MPATLPQPELR	2	MPATLPQPELR2	38838.6	43475.9	34530.7
Q3L7M0	Q3L7M0	GGTA1_RAT	Ggta1	N-acetyllactosaminide alpha-1,3-galactosyltransferase	1	MPAVHLSPLHSLQVFEIR	MPAVHLSPLHSLQVFEIR	4	MPAVHLSPLHSLQVFEIR4	9921.75	5418.9	11505.9
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	MPCLYLQTLAR	MPC(UniMod:4)LYLQTLAR	2	MPC(UniMod:4)LYLQTLAR2	12360.9	22099.3	20683.1
Q9WUD9	Q9WUD9	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	1	MPCPPECPESLHDLMCQCWR	MPC(UniMod:4)PPEC(UniMod:4)PESLHDLMC(UniMod:4)QC(UniMod:4)WR	3	MPC(UniMod:4)PPEC(UniMod:4)PESLHDLMC(UniMod:4)QC(UniMod:4)WR3	313279	269190	264743
Q62844	Q62844	FYN_RAT	Fyn	Tyrosine-protein kinase Fyn	1	MPCPQDCPISLHELMIHCWK	MPC(UniMod:4)PQDC(UniMod:4)PISLHELMIHC(UniMod:4)WK	3	MPC(UniMod:4)PQDC(UniMod:4)PISLHELMIHC(UniMod:4)WK3	7064.79	5421.19	
Q62844	Q62844	FYN_RAT	Fyn	Tyrosine-protein kinase Fyn	1	MPCPQDCPISLHELMIHCWK	MPC(UniMod:4)PQDC(UniMod:4)PISLHELMIHC(UniMod:4)WK	4	MPC(UniMod:4)PQDC(UniMod:4)PISLHELMIHC(UniMod:4)WK4	27546.1	26324.1	28242.3
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	MPDDVWLVDLDSNR	MPDDVWLVDLDSNR	2	MPDDVWLVDLDSNR2	7882.46	13382.6	9953.6
D3ZJF8	D3ZJF8;F7EZQ4	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	0	MPDGSMFVHQK	MPDGSMFVHQK	2	MPDGSMFVHQK2	54037.4	82663.1	19882.3
D3ZJF8	D3ZJF8;F7EZQ4	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	0	MPDGSMFVHQK	MPDGSMFVHQK	3	MPDGSMFVHQK3	232695	173365	207262
Q8R431	Q8R431	MGLL_RAT	Mgll	Monoglyceride lipase	1	MPEASSPR	MPEASSPR	2	MPEASSPR2	19375.9	22688.1	20751.6
D4A2C6	D4A2C6	D4A2C6_RAT	Lsm4	U6 snRNA-associated Sm-like protein LSm4	1	MPECYIR	MPEC(UniMod:4)YIR	2	MPEC(UniMod:4)YIR2	80155.6	65783.5	87338
P62749	P84076;Q5PQN0;P62749	HPCL1_RAT	Hpcal1	Hippocalcin-like protein 1	0	MPEDESTPEK	MPEDESTPEK	2	MPEDESTPEK2	10585.3	14869.2	9273.07
P62749	P84076;Q5PQN0;P62749	HPCL1_RAT	Hpcal1	Hippocalcin-like protein 1	0	MPEDESTPEKR	MPEDESTPEKR	3	MPEDESTPEKR3	21241.3		15666.4
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	MPEDGLSEDK	MPEDGLSEDK	2	MPEDGLSEDK2	106275	77248.3	78050.8
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	MPEDGLSEDKKPFK	MPEDGLSEDKKPFK	2	MPEDGLSEDKKPFK2	13316.1	7775.62	11363
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	MPEDGLSEDKKPFK	MPEDGLSEDKKPFK	3	MPEDGLSEDKKPFK3	557049	447515	460729
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	MPEDGLSEDKKPFK	MPEDGLSEDKKPFK	4	MPEDGLSEDKKPFK4	473263	515031	500129
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	MPELIDIR	MPELIDIR	2	MPELIDIR2	41397	51000.8	32867.6
A0A0G2JUA5	A0A0G2JUA5	A0A0G2JUA5_RAT	Ahnak	AHNAK nucleoprotein	1	MPEMNIK	MPEMNIK	2	MPEMNIK2	15621.7	11764.6	4830.77
Q0PMD2	Q0PMD2	ANTR1_RAT	Antxr1	Anthrax toxin receptor 1	1	MPEQEYEFPEPR	MPEQEYEFPEPR	2	MPEQEYEFPEPR2	12131.2	13044	10062.7
Q0PMD2	Q0PMD2	ANTR1_RAT	Antxr1	Anthrax toxin receptor 1	1	MPEQEYEFPEPR	MPEQEYEFPEPR	3	MPEQEYEFPEPR3	6600.37	8345.2	18703.1
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	MPESVNVMQIVK	MPESVNVMQIVK	2	MPESVNVMQIVK2	17782.6	15412.1	12293.4
Q6P6S0	Q6P6S0	SNP47_RAT	Snap47	Synaptosomal-associated protein 47	1	MPEVIPILEVQFSK	MPEVIPILEVQFSK	2	MPEVIPILEVQFSK2	1643.57	2498.5	3101.48
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	MPEVPGLQSAPSCWTTLCHER	MPEVPGLQSAPSC(UniMod:4)WTTLC(UniMod:4)HER	3	MPEVPGLQSAPSC(UniMod:4)WTTLC(UniMod:4)HER3	10933.1	18942.5	
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	MPFAWAAR	MPFAWAAR	2	MPFAWAAR2	20686	17889.1	20272.9
A0A8I6ADN8	A0A8I6ADN8	A0A8I6ADN8_RAT	Dock10	Dedicator of cytokinesis 10	1	MPFAWAVR	MPFAWAVR	2	MPFAWAVR2	13533	7932.89	8533.94
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	MPFAWTAIHLMNIVSSAGSLER	MPFAWTAIHLMNIVSSAGSLER	3	MPFAWTAIHLMNIVSSAGSLER3	4096.49		
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	MPFSLVGDVFELNFK	MPFSLVGDVFELNFK	2	MPFSLVGDVFELNFK2		17194.2	17599.9
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	MPFSLVGDVFELNFK	MPFSLVGDVFELNFK	3	MPFSLVGDVFELNFK3		1230.86	1769.33
A0A8I6ANL9	A0A8I6ANL9	A0A8I6ANL9_RAT	Cdc23	Cell division cycle 23	1	MPFYCLYYYR	MPFYC(UniMod:4)LYYYR	2	MPFYC(UniMod:4)LYYYR2	3351.05	4344.86	
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	MPGHPPPPEIPSEVGACDPEKPESTR	MPGHPPPPEIPSEVGAC(UniMod:4)DPEKPESTR	4	MPGHPPPPEIPSEVGAC(UniMod:4)DPEKPESTR4	34586	25777.6	26560.5
Q5BJR4	Q5BJR4	PRUN2_RAT	Prune2	Protein prune homolog 2	1	MPGLGWMK	MPGLGWMK	2	MPGLGWMK2	57122	74872.4	56224
P0C1S9	P0C1S9	DGLB_RAT	Daglb	Diacylglycerol lipase-beta	1	MPGMVLFGR	MPGMVLFGR	2	MPGMVLFGR2	1362.37	7114.55	1776.51
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	MPGNPYSSNEPGIGPLMR	MPGNPYSSNEPGIGPLMR	2	MPGNPYSSNEPGIGPLMR2	19441.2	28128.4	22830.6
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	MPGNPYSSNEPGIGPLMR	MPGNPYSSNEPGIGPLMR	3	MPGNPYSSNEPGIGPLMR3	12205.1	19315.8	
P50609	P50609	FMOD_RAT	Fmod	Fibromodulin	1	MPGPLPR	MPGPLPR	2	MPGPLPR2	94552.4	70812.1	71721.1
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	MPGTDAPGIPAALAFGSQVSDTLLDCR	MPGTDAPGIPAALAFGSQVSDTLLDC(UniMod:4)R	3	MPGTDAPGIPAALAFGSQVSDTLLDC(UniMod:4)R3	12038.3	15538.2	21872.8
Q704E8	Q704E8	ABCB7_RAT	Abcb7	Iron-sulfur clusters transporter ABCB7, mitochondrial	1	MPHGYDTQVGER	MPHGYDTQVGER	2	MPHGYDTQVGER2	16086	16854.5	10960.6
Q704E8	Q704E8	ABCB7_RAT	Abcb7	Iron-sulfur clusters transporter ABCB7, mitochondrial	1	MPHGYDTQVGER	MPHGYDTQVGER	3	MPHGYDTQVGER3	48672.5	43843.7	60518.3
P48032	P48032	TIMP3_RAT	Timp3	Metalloproteinase inhibitor 3	1	MPHVQYIHTEASESLCGLK	MPHVQYIHTEASESLC(UniMod:4)GLK	3	MPHVQYIHTEASESLC(UniMod:4)GLK3	50354.3	53056.3	32429.5
P48032	P48032	TIMP3_RAT	Timp3	Metalloproteinase inhibitor 3	1	MPHVQYIHTEASESLCGLK	MPHVQYIHTEASESLC(UniMod:4)GLK	4	MPHVQYIHTEASESLC(UniMod:4)GLK4	496323	418439	399770
Q64232	Q64232	TECR_RAT	Tecr	Very-long-chain enoyl-CoA reductase	1	MPIIPFLL	MPIIPFLL	1	MPIIPFLL1	117283	278880	313743
Q64232	Q64232	TECR_RAT	Tecr	Very-long-chain enoyl-CoA reductase	1	MPIIPFLL	MPIIPFLL	2	MPIIPFLL2	5073.61	142030	171595
D3ZWC6	D3ZWC6;A0A8J8Y1B9;D3ZMX6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	0	MPILISK	MPILISK	2	MPILISK2	262690	232426	248716
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	MPIPVIK	MPIPVIK	2	MPIPVIK2	305338	205381	336709
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	MPITADLVAPILR	MPITADLVAPILR	2	MPITADLVAPILR2	13082.7	9784.98	8456.11
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	MPLATSTDHGHNLQTVQLLIK	MPLATSTDHGHNLQTVQLLIK	3	MPLATSTDHGHNLQTVQLLIK3	122437	150860	119238
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	MPLATSTDHGHNLQTVQLLIK	MPLATSTDHGHNLQTVQLLIK	4	MPLATSTDHGHNLQTVQLLIK4	211511	251320	232279
P51635	P51635	AK1A1_RAT	Akr1a1	Aldo-keto reductase family 1 member A1	1	MPLIGLGTWK	MPLIGLGTWK	2	MPLIGLGTWK2	24042.2	23376.7	25769.8
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	MPLLLIDGK	MPLLLIDGK	2	MPLLLIDGK2	84682.3	105842	84441
A0A8I5ZKH1	A0A8I5ZKH1	A0A8I5ZKH1_RAT	Ythdc2	RNA helicase	1	MPLQELCLHTK	MPLQELC(UniMod:4)LHTK	3	MPLQELC(UniMod:4)LHTK3		5463.72	
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	MPLTEPLR	MPLTEPLR	2	MPLTEPLR2	7089.49	7850.78	6516.56
P05508	P05508	NU4M_RAT	Mtnd4	NADH-ubiquinone oxidoreductase chain 4	1	MPLYGVHLWLPK	MPLYGVHLWLPK	3	MPLYGVHLWLPK3	3771.64		7072.1
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	MPMGLSTGAISDSQIK	MPMGLSTGAISDSQIK	2	MPMGLSTGAISDSQIK2	3.68762e+06	4.38096e+06	4.25312e+06
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	MPMGLSTGAISDSQIK	MPMGLSTGAISDSQIK	3	MPMGLSTGAISDSQIK3	964749	1.24695e+06	1.11149e+06
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	MPNASPEELADMVAK	MPNASPEELADMVAK	2	MPNASPEELADMVAK2	2.24114e+06	1.48619e+06	1.44122e+06
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	MPNASPEELADMVAK	MPNASPEELADMVAK	3	MPNASPEELADMVAK3	145056	93405.8	80232.6
Q5FVN0	Q5FVN0	MBOA5_RAT	Lpcat3	Lysophospholipid acyltransferase 5	1	MPNSTIPALK	MPNSTIPALK	2	MPNSTIPALK2	95656.1	83761.8	90079.6
Q5FVN0	Q5FVN0	MBOA5_RAT	Lpcat3	Lysophospholipid acyltransferase 5	1	MPNSTIPALKR	MPNSTIPALKR	3	MPNSTIPALKR3	19449.7	20412.7	18112
P82450	P82450	SIAE_RAT	Siae	Sialate O-acetylesterase	1	MPNTFMAVAMDLCDRDSPFGSIHPR	MPNTFMAVAMDLC(UniMod:4)DRDSPFGSIHPR	4	MPNTFMAVAMDLC(UniMod:4)DRDSPFGSIHPR4	10892.8	7667.84	6063.68
P56603	P56603	SCAM1_RAT	Scamp1	Secretory carrier-associated membrane protein 1	1	MPNVPNTQPAIMKPTEEHPAYTQITK	MPNVPNTQPAIMKPTEEHPAYTQITK	3	MPNVPNTQPAIMKPTEEHPAYTQITK3	37098.7	30817.6	29221
P56603	P56603	SCAM1_RAT	Scamp1	Secretory carrier-associated membrane protein 1	1	MPNVPNTQPAIMKPTEEHPAYTQITK	MPNVPNTQPAIMKPTEEHPAYTQITK	4	MPNVPNTQPAIMKPTEEHPAYTQITK4	265202	277929	275986
Q9EPJ3	Q9EPJ3	RT26_RAT	Mrps26	Small ribosomal subunit protein mS26	1	MPPAVDPAELFVLTER	MPPAVDPAELFVLTER	2	MPPAVDPAELFVLTER2	5180.12		
Q641Y2	Q641Y2	NDUS2_RAT	Ndufs2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	1	MPPGEIK	MPPGEIK	2	MPPGEIK2	38300.6	44311	35543.1
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	MPPHFVLLFAVFDEGR	MPPHFVLLFAVFDEGR	3	MPPHFVLLFAVFDEGR3	32506.9	23509.5	19116.3
Q09137	Q09137	AAPK2_RAT	Prkaa2	5'-AMP-activated protein kinase catalytic subunit alpha-2	1	MPPLIADSPK	MPPLIADSPK	2	MPPLIADSPK2	35602.4	39760.3	27233.1
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	MPPLIPAEVDK	MPPLIPAEVDK	2	MPPLIPAEVDK2	82588.1	90287.8	80212.6
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	MPPLIPAEVDKIR	MPPLIPAEVDKIR	3	MPPLIPAEVDKIR3	31827.7	53526.4	36405.2
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	MPPSHQLDHSK	MPPSHQLDHSK	2	MPPSHQLDHSK2	30042.3		29461.9
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	MPPSHQLDHSK	MPPSHQLDHSK	3	MPPSHQLDHSK3			58268.4
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	MPPYDEETQAIIDAAQEAR	MPPYDEETQAIIDAAQEAR	3	MPPYDEETQAIIDAAQEAR3	170892	151097	152817
P04906	P04906	GSTP1_RAT	Gstp1	Glutathione S-transferase P	1	MPPYTIVYFPVR	MPPYTIVYFPVR	2	MPPYTIVYFPVR2	6997.55	7573.32	
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	MPQLLAYYYK	MPQLLAYYYK	2	MPQLLAYYYK2	7746.68		5781.23
A4V8B4	A4V8B4	SAV1_RAT	Sav1	Protein salvador homolog 1	1	MPQNQGR	MPQNQGR	2	MPQNQGR2			29339.6
A0A0G2K1P3	A0A0G2K1P3	A0A0G2K1P3_RAT	Bnip2	BCL2 interacting protein 2	1	MPSLGWLR	MPSLGWLR	2	MPSLGWLR2	41725.7	62689.8	46633.8
Q05096	Q05096	MYO1B_RAT	Myo1b	Unconventional myosin-Ib	1	MPSLSPIDK	MPSLSPIDK	2	MPSLSPIDK2	4659.43	4774.54	8124.49
Q9EQH1	Q9EQH1	GAB2_RAT	Gab2	GRB2-associated-binding protein 2	1	MPSNTLCR	MPSNTLC(UniMod:4)R	2	MPSNTLC(UniMod:4)R2	28816.2	24371.3	30679.1
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	MPSSVWDFVASR	MPSSVWDFVASR	2	MPSSVWDFVASR2	52383.3	43136.9	49378.5
P58405	P58405	STRN3_RAT	Strn3	Striatin-3	1	MPTFESEETK	MPTFESEETK	2	MPTFESEETK2	25002.5	26363.8	31053.6
P07943	P07943;A0A8I6A068	ALDR_RAT	Akr1b1	Aldo-keto reductase family 1 member B1	0	MPTLGLGTWK	MPTLGLGTWK	2	MPTLGLGTWK2	17956.4	19520.7	24324.1
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	MPTPPNYK	MPTPPNYK	2	MPTPPNYK2	79552.8	82421.6	75941.9
A1L1J9	A1L1J9	LMF2_RAT	Lmf2	Lipase maturation factor 2	1	MPTSWPK	MPTSWPK	2	MPTSWPK2	47210.6	39539	50881.7
D3ZYT8	D3ZYT8	D3ZYT8_RAT	Pikfyve	1-phosphatidylinositol-3-phosphate 5-kinase	1	MPTVVSPELYR	MPTVVSPELYR	2	MPTVVSPELYR2	9395.57		7251.13
P58751	P58751	RELN_RAT	Reln	Reelin	1	MPVCGSTGDALVFIEK	MPVC(UniMod:4)GSTGDALVFIEK	2	MPVC(UniMod:4)GSTGDALVFIEK2	27812.3	39051.3	41196.8
D4A0T9	D4A0T9	D4A0T9_RAT	Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	1	MPVQEELCGLASKPPSR	MPVQEELC(UniMod:4)GLASKPPSR	3	MPVQEELC(UniMod:4)GLASKPPSR3		6003.44	2587.71
Q6UPR8	Q6UPR8	ERMP1_RAT	Ermp1	Endoplasmic reticulum metallopeptidase 1	1	MPWDSIK	MPWDSIK	2	MPWDSIK2	27551.7	19698.3	18772.4
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	MPWFHGNISR	MPWFHGNISR	2	MPWFHGNISR2	9437.13		6215.69
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	MPWFHGNISR	MPWFHGNISR	3	MPWFHGNISR3	106230	159901	144537
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	MPWQNVEHVGDQSPYVTSVILHIK	MPWQNVEHVGDQSPYVTSVILHIK	4	MPWQNVEHVGDQSPYVTSVILHIK4	21930.2	38105.1	30012.4
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	MPYQEIK	MPYQEIK	2	MPYQEIK2	368090	352558	341944
A0A8I5YCC9	A0A8I5YCC9	A0A8I5YCC9_RAT	Itga5	Integrin subunit alpha 5	1	MPYQILPR	MPYQILPR	2	MPYQILPR2	13729.3	11156.6	13852.2
D4A415	D4A415	D4A415_RAT	Abraxas2	Abraxas 2, BRISC complex subunit	1	MPYSGFSAEGR	MPYSGFSAEGR	2	MPYSGFSAEGR2	50285.6	73754.5	59932.8
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	MQAAITELMVMTAQK	MQAAITELMVMTAQK	2	MQAAITELMVMTAQK2	11052.2	8133.8	12965.2
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	MQAAITELMVMTAQK	MQAAITELMVMTAQK	3	MQAAITELMVMTAQK3	6058.06	5275.07	8482.9
D3ZF26	D3ZF26	D3ZF26_RAT	Tnks1bp1	Tankyrase 1 binding protein 1	1	MQAESQNPTNAELEDR	MQAESQNPTNAELEDR	2	MQAESQNPTNAELEDR2	1257.83		2530.51
O08651	O08651	SERA_RAT	Phgdh	D-3-phosphoglycerate dehydrogenase	1	MQAFGMK	MQAFGMK	2	MQAFGMK2	18302.2	6967.98	21121.8
Q9JLT0	Q9JLT0	MYH10_RAT	Myh10	Myosin-10	1	MQAHIQDLEEQLDEEEGAR	MQAHIQDLEEQLDEEEGAR	3	MQAHIQDLEEQLDEEEGAR3	1262.52	4960.87	2232.84
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	MQALTYLQR	MQALTYLQR	2	MQALTYLQR2	19055	19339	27274.1
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	MQAQATTEGAPQLSMVGLFQR	MQAQATTEGAPQLSMVGLFQR	3	MQAQATTEGAPQLSMVGLFQR3	125293	101189	114659
Q91Y81	Q91Y81	SEPT2_RAT	Septin2	Septin-2	1	MQAQMQMQMQGGDTDSSTLGHHV	MQAQMQMQMQGGDTDSSTLGHHV	3	MQAQMQMQMQGGDTDSSTLGHHV3	8149.72	7646.98	9277.04
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	MQASYQDHVK	MQASYQDHVK	2	MQASYQDHVK2	21160.4	14352.3	11388.6
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	MQASYQDHVK	MQASYQDHVK	3	MQASYQDHVK3	24216.7	18644	34684.2
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	MQCCCDVGR	MQC(UniMod:4)C(UniMod:4)C(UniMod:4)DVGR	2	MQC(UniMod:4)C(UniMod:4)C(UniMod:4)DVGR2	40071.3	69429.7	47115.8
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	MQCFSVTER	MQC(UniMod:4)FSVTER	2	MQC(UniMod:4)FSVTER2	111811	115883	96780.4
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	MQCVAAFAVSAVASQWER	MQC(UniMod:4)VAAFAVSAVASQWER	3	MQC(UniMod:4)VAAFAVSAVASQWER3	9755.59	14682.8	12558.8
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	MQDEPYQVLVAELHR	MQDEPYQVLVAELHR	3	MQDEPYQVLVAELHR3	20814.4	15835.6	20140.6
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	MQDIPEETESR	MQDIPEETESR	2	MQDIPEETESR2	268227	298661	281411
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	MQDIPEETESRDGEPTASES	MQDIPEETESRDGEPTASES	3	MQDIPEETESRDGEPTASES3	11402.4	14429.2	13307.8
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	MQDLALSEGALPR	MQDLALSEGALPR	2	MQDLALSEGALPR2	28134.5	29866.1	26459.9
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	MQDNAPLMTALAK	MQDNAPLMTALAK	2	MQDNAPLMTALAK2	33305	35569.8	33083.3
Q8R491	Q8R491	EHD3_RAT	Ehd3	EH domain-containing protein 3	1	MQDQLQAQDFSK	MQDQLQAQDFSK	2	MQDQLQAQDFSK2	168087	144540	146597
Q75Q40	Q75Q40	TOM40_RAT	Tomm40	Mitochondrial import receptor subunit TOM40 homolog	1	MQDTSASFGYQLDLPK	MQDTSASFGYQLDLPK	2	MQDTSASFGYQLDLPK2	9654.92	5128.75	9276.24
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	MQEACGSK	MQEAC(UniMod:4)GSK	2	MQEAC(UniMod:4)GSK2			7632.75
D3ZHZ3	D3ZHZ3	D3ZHZ3_RAT	Osbpl3	Oxysterol-binding protein	1	MQEDLCHVAHK	MQEDLC(UniMod:4)HVAHK	3	MQEDLC(UniMod:4)HVAHK3	3645.73	5180.81	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	MQEDLNSR	MQEDLNSR	2	MQEDLNSR2	53725.1	63858.9	78212.9
P09760	P09760	FER_RAT	Fer	Tyrosine-protein kinase Fer	1	MQEEMIK	MQEEMIK	2	MQEEMIK2	9878.61	6803.43	4435.9
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	MQEENLIPR	MQEENLIPR	2	MQEENLIPR2	16090.6	16374.5	10241.8
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	MQEESLR	MQEESLR	2	MQEESLR2	106566	113057	105268
Q4KLN3	Q4KLN3	Q4KLN3_RAT	Srpk1	SRSF protein kinase 1	1	MQEIEEMEK	MQEIEEMEK	2	MQEIEEMEK2	6785.4	2358.65	4217.81
Q4KLN3	Q4KLN3	Q4KLN3_RAT	Srpk1	SRSF protein kinase 1	1	MQEIEEMEKESGPGQK	MQEIEEMEKESGPGQK	3	MQEIEEMEKESGPGQK3	17409.5	11801.6	7725.1
Q641Z6	Q641Z6	EHD1_RAT	Ehd1	EH domain-containing protein 1	1	MQELLQTQDFSK	MQELLQTQDFSK	2	MQELLQTQDFSK2	13627.9	8955.76	12373.2
Q91Y81	Q91Y81	SEPT2_RAT	Septin2	Septin-2	1	MQEMIAR	MQEMIAR	2	MQEMIAR2	71937.8	59638.7	84108.1
Q9JJM9	Q9JJM9	SEPT5_RAT	Septin5	Septin-5	1	MQEMLQK	MQEMLQK	2	MQEMLQK2	52135.9	36653.4	37884.9
A0A8I6A9R8	A0A8I6A9R8	A0A8I6A9R8_RAT	Cope	Coatomer subunit epsilon	1	MQEQDEDATLTQLATAWVNLAMGGEK	MQEQDEDATLTQLATAWVNLAMGGEK	3	MQEQDEDATLTQLATAWVNLAMGGEK3	14435.9		
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	MQEQQADLQR	MQEQQADLQR	2	MQEQQADLQR2	85736.6	66089.7	81320.6
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	MQEVVANLQYDDGSGMK	MQEVVANLQYDDGSGMK	2	MQEVVANLQYDDGSGMK2	27136.9	16797.8	26160.9
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	MQEVVANLQYDDGSGMK	MQEVVANLQYDDGSGMK	3	MQEVVANLQYDDGSGMK3	6248.87		12942.6
P30349	P30349	LKHA4_RAT	Lta4h	Leukotriene A-4 hydrolase	1	MQEVYNFNAINNSEIR	MQEVYNFNAINNSEIR	2	MQEVYNFNAINNSEIR2	3680.36		
O88422	O88422	GALT5_RAT	Galnt5	Polypeptide N-acetylgalactosaminyltransferase 5	1	MQFLLGR	MQFLLGR	2	MQFLLGR2	32248.6	32472.1	35174.5
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	MQFSALR	MQFSALR	2	MQFSALR2	49213.6	49894	44467.8
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	MQGAPPAVK	MQGAPPAVK	2	MQGAPPAVK2	7132.11	10017.9	14861.8
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	MQGFVESMK	MQGFVESMK	2	MQGFVESMK2	58627	52941.2	54072.2
Q03555	Q03555	GEPH_RAT	Gphn	Gephyrin	1	MQGILDPRPTIIK	MQGILDPRPTIIK	3	MQGILDPRPTIIK3	9373.63	19038.6	
P32089	P32089	TXTP_RAT	Slc25a1	Tricarboxylate transport protein, mitochondrial	1	MQGLEAHK	MQGLEAHK	2	MQGLEAHK2	22842.7	24208.7	41212.7
A0A0G2K2Z2	A0A0G2K2Z2	A0A0G2K2Z2_RAT	Inpp5k	Inositol polyphosphate-5-phosphatase K	1	MQGLLLLVFAK	MQGLLLLVFAK	2	MQGLLLLVFAK2	3745.17	4917.1	5671.03
B0BN94	B0BN94	F136A_RAT	Fam136a	Protein FAM136A	1	MQGLMFR	MQGLMFR	2	MQGLMFR2	33335.5	21923.2	23185.4
E9PT66	E9PT66	E9PT66_RAT	Sf3b3	Splicing factor 3b, subunit 3	1	MQGQEAVLAMSSR	MQGQEAVLAMSSR	2	MQGQEAVLAMSSR2		6216.49	4157.5
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	MQGQSPPAPTR	MQGQSPPAPTR	2	MQGQSPPAPTR2	174761	207966	204740
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	MQGSITTPGSIALAQAQAQAQVPAK	MQGSITTPGSIALAQAQAQAQVPAK	3	MQGSITTPGSIALAQAQAQAQVPAK3	8921.73	8446.9	7162.26
A0A8I6ASK1	A0A8I6ASK1	A0A8I6ASK1_RAT	P4ha2	procollagen-proline 4-dioxygenase	1	MQHITGLTVK	MQHITGLTVK	2	MQHITGLTVK2	4261.3	2796.66	1948.45
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	MQHLEQTLTK	MQHLEQTLTK	2	MQHLEQTLTK2	1.95784e+06	1.84353e+06	1.85961e+06
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	MQHLEQTLTK	MQHLEQTLTK	3	MQHLEQTLTK3	4.09679e+06	4.1118e+06	4.55102e+06
P11980	A0A8I6AKN1;M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	MQHLIAR	MQHLIAR	2	MQHLIAR2	77014	56136.9	51862.1
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	MQHNLEQQIQAK	MQHNLEQQIQAK	3	MQHNLEQQIQAK3	9981.74	10713.8	9178.1
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	MQHNLEQQIQAR	MQHNLEQQIQAR	2	MQHNLEQQIQAR2	84254.7	73952.8	71137.4
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	MQHNLEQQIQAR	MQHNLEQQIQAR	3	MQHNLEQQIQAR3	583925	616432	631288
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	MQHNVLVAEVTQQLK	MQHNVLVAEVTQQLK	2	MQHNVLVAEVTQQLK2	4434.89	1487.89	716.672
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	MQHNVLVAEVTQQLK	MQHNVLVAEVTQQLK	3	MQHNVLVAEVTQQLK3	29394.5	20452.8	21774.4
P62986	A0A8I6AN99;P62986;P0CG51;Q63429;A0A8I5ZTA8;P62982	RL40_RAT	Uba52	Ubiquitin-ribosomal protein eL40 fusion protein	0	MQIFVKTLTGKTITLEVEPSDTIENVK	MQIFVKTLTGKTITLEVEPSDTIENVK	4	MQIFVKTLTGKTITLEVEPSDTIENVK4	8288.38	3468.61	13773.7
G3V7L1	G3V7L1;P11530;Q9EPA0	UTRN_RAT	Utrn	Utrophin	0	MQILEDHNK	MQILEDHNK	2	MQILEDHNK2	34561.6	42424	32990.2
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	MQILVER	MQILVER	2	MQILVER2	116728	107525	98690.5
P68136	P60711;P63259;A0A8I5Y704;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	MQKEITALAPSTMK	MQKEITALAPSTMK	2	MQKEITALAPSTMK2	4010.63	7651.68	6996.73
P68136	P60711;P63259;A0A8I5Y704;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	MQKEITALAPSTMK	MQKEITALAPSTMK	3	MQKEITALAPSTMK3	60006	73108.6	116900
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	MQLAAESLQEADK	MQLAAESLQEADK	2	MQLAAESLQEADK2	19276.8	26147.9	16740.7
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	MQLASFLEDPQYQDQHSLHTEVIR	MQLASFLEDPQYQDQHSLHTEVIR	4	MQLASFLEDPQYQDQHSLHTEVIR4	41862.2	37713.5	46857.9
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	MQLCELNK	MQLC(UniMod:4)ELNK	2	MQLC(UniMod:4)ELNK2	20396.1		16604
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	MQLDNPSK	MQLDNPSK	2	MQLDNPSK2	15606.4	23958.3	11182.3
P04905	P04905	GSTM1_RAT	Gstm1	Glutathione S-transferase Mu 1	1	MQLIMLCYNPDFEK	MQLIMLC(UniMod:4)YNPDFEK	2	MQLIMLC(UniMod:4)YNPDFEK2	15608.8	9990.88	13258
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	MQLLEIITTDK	MQLLEIITTDK	2	MQLLEIITTDK2	204549	212526	189803
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	MQLLQSLQEQK	MQLLQSLQEQK	2	MQLLQSLQEQK2	13662.3	13518.6	12974.2
B0BNI6	B0BNI6	B0BNI6_RAT	Slc25a35	Solute carrier family 25, member 35	1	MQLQGELQAPGTYQR	MQLQGELQAPGTYQR	2	MQLQGELQAPGTYQR2	2333.58	2869.05	1457.08
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	MQLQQELELLNAYQSK	MQLQQELELLNAYQSK	2	MQLQQELELLNAYQSK2	3704.08	3556.44	
P97700	P97700	M2OM_RAT	Slc25a11	Mitochondrial 2-oxoglutarate/malate carrier protein	1	MQLSGEGAK	MQLSGEGAK	2	MQLSGEGAK2	68321.7	58291.6	74109.3
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	MQLVLPK	MQLVLPK	2	MQLVLPK2	155829	128934	142851
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	MQMLEDEDDLAYAETEK	MQMLEDEDDLAYAETEK	3	MQMLEDEDDLAYAETEK3	37748.8	37791.9	26048.6
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	MQMLEDEDDLAYAETEKK	MQMLEDEDDLAYAETEKK	3	MQMLEDEDDLAYAETEKK3	26273.3	27303.6	30996.2
Q68FW9	Q68FW9	CSN3_RAT	Cops3	COP9 signalosome complex subunit 3	1	MQMNTNQLTSVHADLCQLCLLAK	MQMNTNQLTSVHADLC(UniMod:4)QLC(UniMod:4)LLAK	3	MQMNTNQLTSVHADLC(UniMod:4)QLC(UniMod:4)LLAK3	11854.5	15463.2	16373
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	MQNNSAENETAEGEEK	MQNNSAENETAEGEEK	2	MQNNSAENETAEGEEK2	126199	106092	96049.9
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	MQNNSAENETAEGEEK	MQNNSAENETAEGEEK	3	MQNNSAENETAEGEEK3	15883.6	14263.3	15062.4
Q6TMG5	Q6TMG5	NEMO_RAT	Ikbkg	NF-kappa-B essential modulator	1	MQNQSVEAALR	MQNQSVEAALR	2	MQNQSVEAALR2	16420.4	20916.4	24453.2
Q4V7F5	Q4V7F5	PIHD1_RAT	Pih1d1	PIH1 domain-containing protein 1	1	MQNSDFLR	MQNSDFLR	2	MQNSDFLR2	4772.06	3894.74	
Q5RJS8	Q5RJS8	TPST2_RAT	Tpst2	Protein-tyrosine sulfotransferase 2	1	MQPEQEELVMLGADHVEYR	MQPEQEELVMLGADHVEYR	3	MQPEQEELVMLGADHVEYR3	39613.5	54402.8	49283.8
A0A8I6G604	A0A8I6G604	A0A8I6G604_RAT	Lman2l	Lectin, mannose-binding 2-like	1	MQPGPVFGNMDK	MQPGPVFGNMDK	2	MQPGPVFGNMDK2	30188.3	26150	28974.9
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	MQPHLDEFQEK	MQPHLDEFQEK	2	MQPHLDEFQEK2	7.31508e+06	6.17953e+06	6.09638e+06
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	MQPHLDEFQEK	MQPHLDEFQEK	3	MQPHLDEFQEK3	3.71625e+07	3.31749e+07	3.64195e+07
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	MQPHLDEFQEKWNEEVEAYR	MQPHLDEFQEKWNEEVEAYR	4	MQPHLDEFQEKWNEEVEAYR4	17824.2	10728.8	
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	MQPHLDEFQEKWNEEVEAYRQK	MQPHLDEFQEKWNEEVEAYRQK	4	MQPHLDEFQEKWNEEVEAYRQK4	15629	15480.1	16825.5
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	MQPQASATASQR	MQPQASATASQR	2	MQPQASATASQR2	99242.1	95082.4	19878.4
Q6QI44	Q6QI44	NAA25_RAT	Naa25	N-alpha-acetyltransferase 25, NatB auxiliary subunit	1	MQQAGMALYK	MQQAGMALYK	2	MQQAGMALYK2	7203.32	2871.15	2459.02
A0A8I5ZVW2	A0A8I5ZVW2	A0A8I5ZVW2_RAT	Kif16b	Kinesin family member 16B	1	MQQEVETR	MQQEVETR	2	MQQEVETR2	2313.28		
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	MQQIEEVSILFADIVGFTK	MQQIEEVSILFADIVGFTK	3	MQQIEEVSILFADIVGFTK3		2389.15	6213.84
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	MQQLEQMLTALDQMR	MQQLEQMLTALDQMR	2	MQQLEQMLTALDQMR2	3530.47	1116.53	5733.5
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	MQQLEQMLTALDQMR	MQQLEQMLTALDQMR	3	MQQLEQMLTALDQMR3	14729.5	4355.01	28150.8
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	MQQNIQELEEQLEEEESAR	MQQNIQELEEQLEEEESAR	3	MQQNIQELEEQLEEEESAR3	4.15243e+06	4.29388e+06	4.52876e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	MQQNIQELEEQLEEEESARQK	MQQNIQELEEQLEEEESARQK	3	MQQNIQELEEQLEEEESARQK3	20426.7	28201	27634.4
D4A4T0	D4A4T0	D4A4T0_RAT	Stub1	STIP1 homology and U-box containing protein 1	1	MQQPEQALADCR	MQQPEQALADC(UniMod:4)R	2	MQQPEQALADC(UniMod:4)R2	16226.5	6376.83	9124.85
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	MQQQLDEYQELLDIK	MQQQLDEYQELLDIK	2	MQQQLDEYQELLDIK2	12962.3	9489.03	9954.01
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	MQQQLDEYQELLDIK	MQQQLDEYQELLDIK	3	MQQQLDEYQELLDIK3	1442.8	4325.86	
Q7TPA5	Q7TPA5	SPA11_RAT	Serpina11	Serpin A11	1	MQQVEAALQPETLR	MQQVEAALQPETLR	2	MQQVEAALQPETLR2	8066.21	5223.79	4637.43
Q63556	Q63556	SPA3M_RAT	Serpina3m	Serine protease inhibitor A3M (Fragment)	1	MQQVEASLQPETLK	MQQVEASLQPETLK	2	MQQVEASLQPETLK2	306511	273306	235854
Q63556	Q63556	SPA3M_RAT	Serpina3m	Serine protease inhibitor A3M (Fragment)	1	MQQVEASLQPETLK	MQQVEASLQPETLK	3	MQQVEASLQPETLK3	56456.3	60167.3	49848.2
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	MQQVEASLQPETLR	MQQVEASLQPETLR	2	MQQVEASLQPETLR2	1.23531e+06	1.1988e+06	1.22757e+06
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	MQQVEASLQPETLR	MQQVEASLQPETLR	3	MQQVEASLQPETLR3	508457	462404	494218
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	MQQVEASLQPETLRR	MQQVEASLQPETLRR	3	MQQVEASLQPETLRR3	508454	667772	625227
P05544	A0A0G2JSK1;P05544;P09005;P05545	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	MQQVESSLQPETLK	MQQVESSLQPETLK	2	MQQVESSLQPETLK2	6.57354e+06	6.16257e+06	6.3105e+06
P05544	A0A0G2JSK1;P05544;P09005;P05545	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	MQQVESSLQPETLK	MQQVESSLQPETLK	3	MQQVESSLQPETLK3	859380	904270	953074
P05544	A0A0G2JSK1;P05544;P09005;P05545	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	MQQVESSLQPETLKK	MQQVESSLQPETLKK	2	MQQVESSLQPETLKK2	100639	101415	99935
P05544	A0A0G2JSK1;P05544;P09005;P05545	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	MQQVESSLQPETLKK	MQQVESSLQPETLKK	3	MQQVESSLQPETLKK3	3.55825e+06	3.65791e+06	3.60223e+06
P05544	A0A0G2JSK1;P05544;P09005;P05545	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	MQQVESSLQPETLKK	MQQVESSLQPETLKK	4	MQQVESSLQPETLKK4	20823.6	10434.8	14119.4
Q5XIA1	Q5XIA1	NCLN_RAT	Ncln	BOS complex subunit NCLN	1	MQQYDLQGQPYGTR	MQQYDLQGQPYGTR	2	MQQYDLQGQPYGTR2	16087	12025.9	13939.4
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	MQSACLLSDMESFK	MQSAC(UniMod:4)LLSDMESFK	2	MQSAC(UniMod:4)LLSDMESFK2	52792.1	49570.8	46714.7
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	MQSFSEVELNNMK	MQSFSEVELNNMK	2	MQSFSEVELNNMK2	2662.36	9399.83	11057
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	MQSSGIPDGGHIR	MQSSGIPDGGHIR	2	MQSSGIPDGGHIR2	9082.33	8173.4	4577.68
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	MQSSGIPDGGHIR	MQSSGIPDGGHIR	3	MQSSGIPDGGHIR3	77268.8	109100	87674.9
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	MQSTEALPER	MQSTEALPER	2	MQSTEALPER2	94273.4	89257.1	88237.6
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	MQSTEALPERAEAVHDALESLESVLR	MQSTEALPERAEAVHDALESLESVLR	3	MQSTEALPERAEAVHDALESLESVLR3	1221.7	7416	2952.79
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	MQSTEALPERAEAVHDALESLESVLR	MQSTEALPERAEAVHDALESLESVLR	4	MQSTEALPERAEAVHDALESLESVLR4	17820.1	27552.7	12849.8
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	MQSTGSAMPASSSFK	MQSTGSAMPASSSFK	2	MQSTGSAMPASSSFK2	33391.1	33165.2	36077.5
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	MQSVIELGR	MQSVIELGR	2	MQSVIELGR2	96140.2	67119.2	83519.6
P0C546	P0C546	S2542_RAT	Slc25a42	Mitochondrial coenzyme A transporter SLC25A42	1	MQTAGVTGHQHGSILSTLR	MQTAGVTGHQHGSILSTLR	4	MQTAGVTGHQHGSILSTLR4	3067.81	3075.95	1544.76
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	MQTEAQHER	MQTEAQHER	2	MQTEAQHER2			14659.5
A0A0G2JTM9	A0A0G2JTM9	A0A0G2JTM9_RAT	Dnajb14	DnaJ heat shock protein family (Hsp40) member B14	1	MQTENLGVVYYVNK	MQTENLGVVYYVNK	2	MQTENLGVVYYVNK2	7252.56	6482.63	6920.53
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	MQTINEDLKDILQAAK	MQTINEDLKDILQAAK	3	MQTINEDLKDILQAAK3	20482.6	19255.1	10856.1
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	MQTNQTPPTYNK	MQTNQTPPTYNK	2	MQTNQTPPTYNK2	81345.3	78076.2	72851.8
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	MQTQLLELR	MQTQLLELR	2	MQTQLLELR2	72369	61200.7	93585.4
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	MQTQQVNTLK	MQTQQVNTLK	2	MQTQQVNTLK2	117282	114396	119868
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	MQTSEFIR	MQTSEFIR	2	MQTSEFIR2	38468.3	26493.6	33163.3
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	MQTTIQDNVENLQSSMVPFANELK	MQTTIQDNVENLQSSMVPFANELK	3	MQTTIQDNVENLQSSMVPFANELK3	7.3611e+06	7.58714e+06	8.10748e+06
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	MQTTIQDNVENLQSSMVPFANELK	MQTTIQDNVENLQSSMVPFANELK	4	MQTTIQDNVENLQSSMVPFANELK4	89282.2	96810.9	92210.3
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	MQTTIQDNVENLQSSMVPFANELKEK	MQTTIQDNVENLQSSMVPFANELKEK	4	MQTTIQDNVENLQSSMVPFANELKEK4	153931	185500	244242
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	MQTYQDAESR	MQTYQDAESR	2	MQTYQDAESR2	54894.3	49040.5	59384.1
P16036	P16036	S25A3_RAT	Slc25a3	Solute carrier family 25 member 3	1	MQVDPQK	MQVDPQK	1	MQVDPQK1	65227.4	51442	59508.3
P16036	P16036	S25A3_RAT	Slc25a3	Solute carrier family 25 member 3	1	MQVDPQK	MQVDPQK	2	MQVDPQK2	1.02604e+06	1.11825e+06	1.09446e+06
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	MQVDQEEPHTEEQQPQTPAENK	MQVDQEEPHTEEQQPQTPAENK	3	MQVDQEEPHTEEQQPQTPAENK3	799296	939044	878342
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	MQVDQEEPHTEEQQPQTPAENK	MQVDQEEPHTEEQQPQTPAENK	4	MQVDQEEPHTEEQQPQTPAENK4	20644.6	19599.2	21080.3
P29147	P29147	BDH_RAT	Bdh1	D-beta-hydroxybutyrate dehydrogenase, mitochondrial	1	MQVMTHFPGAISDK	MQVMTHFPGAISDK	3	MQVMTHFPGAISDK3	21792.8	19677.8	37798.7
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	MQVTMALASLVGK	MQVTMALASLVGK	2	MQVTMALASLVGK2	22438.5	18182.8	11961.1
Q5XIJ4	Q5XIJ4	F210A_RAT	Fam210a	Protein FAM210A	1	MQWNVPRTMSR	MQWNVPRTMSR	2	MQWNVPRTMSR2			22556.1
Q1H5H1	Q1H5H1	SELT_RAT	Selenot	Thioredoxin reductase-like selenoprotein T	1	MQYATGPLLK	MQYATGPLLK	2	MQYATGPLLK2	47371.4	56051	48159.7
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	MQYSLEYFQFMK	MQYSLEYFQFMK	2	MQYSLEYFQFMK2	35668.7	52421.2	31019.4
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	MRAELGEYIR	MRAELGEYIR	3	MRAELGEYIR3		13697.1	15054.2
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	MRDCYCTVNLDQEEVFR	MRDC(UniMod:4)YC(UniMod:4)TVNLDQEEVFR	3	MRDC(UniMod:4)YC(UniMod:4)TVNLDQEEVFR3	75252.4	99453.8	116058
A0A8I6B124	A0A8I6B124	A0A8I6B124_RAT	Zswim8	Zinc finger, SWIM-type containing 8	1	MRDGLVIPLVELSAK	MRDGLVIPLVELSAK	3	MRDGLVIPLVELSAK3	4886.06	5310.26	7020.29
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	MRDLSSSEK	MRDLSSSEK	2	MRDLSSSEK2	4437.62		7515.63
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	MRDMGEMVTQGQTDAQYMFLR	MRDMGEMVTQGQTDAQYMFLR	3	MRDMGEMVTQGQTDAQYMFLR3	10149.6	10237.5	8044.56
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	MRDVILFEK	MRDVILFEK	2	MRDVILFEK2	117212	93940.6	104499
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	MRDVILFEK	MRDVILFEK	3	MRDVILFEK3	1.66629e+06	1.54896e+06	1.61945e+06
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	MRDVILFEKR	MRDVILFEKR	3	MRDVILFEKR3	5588.04	3650.46	3284.53
Q27W01	Q27W01	RBM8A_RAT	Rbm8a	RNA-binding protein 8A	1	MREDYDSVEQDGDEPGPQR	MREDYDSVEQDGDEPGPQR	3	MREDYDSVEQDGDEPGPQR3	10298	15694.4	10706.5
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	MREEENEGIVQLR	MREEENEGIVQLR	3	MREEENEGIVQLR3	15950	20453.8	14274.5
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	MREEVITLIR	MREEVITLIR	3	MREEVITLIR3	128572	118302	115473
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	MREFQEDPEMLMDLMYR	MREFQEDPEMLMDLMYR	3	MREFQEDPEMLMDLMYR3	19877.5	34726.3	24657.2
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	MREHLELFWSR	MREHLELFWSR	3	MREHLELFWSR3	271266	283744	275040
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	MREHVMK	MREHVMK	2	MREHVMK2			7151.03
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	MREHVMNEIDNNK	MREHVMNEIDNNK	3	MREHVMNEIDNNK3	5766.81	1088.07	3806.95
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	MREHVMNEIDNNKDR	MREHVMNEIDNNKDR	3	MREHVMNEIDNNKDR3	6441.39	7669.4	7921.35
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	MREIVHIQIGQCGNQIGAK	MREIVHIQIGQC(UniMod:4)GNQIGAK	3	MREIVHIQIGQC(UniMod:4)GNQIGAK3	67094.1	86385.7	87645.4
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	MREIVHIQIGQCGNQIGAK	MREIVHIQIGQC(UniMod:4)GNQIGAK	4	MREIVHIQIGQC(UniMod:4)GNQIGAK4	392343	880210	710864
Q6P9T8	Q6P9T8;B4F7C2	TBB4B_RAT	Tubb4b	Tubulin beta-4B chain	0	MREIVHLQAGQCGNQIGAK	MREIVHLQAGQC(UniMod:4)GNQIGAK	3	MREIVHLQAGQC(UniMod:4)GNQIGAK3	135595	164260	176835
Q6P9T8	Q6P9T8;B4F7C2	TBB4B_RAT	Tubb4b	Tubulin beta-4B chain	0	MREIVHLQAGQCGNQIGAK	MREIVHLQAGQC(UniMod:4)GNQIGAK	4	MREIVHLQAGQC(UniMod:4)GNQIGAK4	401480	627710	738728
A0A0G2K528	A0A0G2K528	A0A0G2K528_RAT	Stx16	Syntaxin 16	1	MRELASLHDK	MRELASLHDK	3	MRELASLHDK3		6091.95	3646.4
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	MREVCDEVK	MREVC(UniMod:4)DEVK	3	MREVC(UniMod:4)DEVK3	43037.8	51755.9	49850.7
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	MREWGAEALTSLIK	MREWGAEALTSLIK	3	MREWGAEALTSLIK3	6238.69	4109.66	8744.03
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	MRFDEIFLK	MRFDEIFLK	3	MRFDEIFLK3	3184.12	2774.48	
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	MRGEAEAFAVGAR	MRGEAEAFAVGAR	3	MRGEAEAFAVGAR3	14098.5	28586.5	24587.1
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	MRGETTLWNPGCDHAGIATQVVVEK	MRGETTLWNPGC(UniMod:4)DHAGIATQVVVEK	3	MRGETTLWNPGC(UniMod:4)DHAGIATQVVVEK3	2010.88		4569.32
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	MRGETTLWNPGCDHAGIATQVVVEK	MRGETTLWNPGC(UniMod:4)DHAGIATQVVVEK	4	MRGETTLWNPGC(UniMod:4)DHAGIATQVVVEK4	53751	72306.3	84552.6
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	MRNGYELSPTAAANFTR	MRNGYELSPTAAANFTR	3	MRNGYELSPTAAANFTR3	5081.72	4900.5	4914.58
B0BN65	B0BN65	B0BN65_RAT	Cyria	CYFIP related Rac1 interactor A	1	MRNPAIQNDFSYYR	MRNPAIQNDFSYYR	3	MRNPAIQNDFSYYR3	4673.65	4670.57	6936.49
A0A8I6GHP9	A0A8I6GHP9	A0A8I6GHP9_RAT	Vps13d	Vacuolar protein sorting 13 homolog D	1	MRPGSGMLSVR	MRPGSGMLSVR	3	MRPGSGMLSVR3		4708.49	4791.08
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	MRPSTDTLTVTVENSHGLR	MRPSTDTLTVTVENSHGLR	3	MRPSTDTLTVTVENSHGLR3	33695.6	28796.7	20175.1
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	MRPSTDTLTVTVENSHGLR	MRPSTDTLTVTVENSHGLR	4	MRPSTDTLTVTVENSHGLR4	83775.2	102854	73277.1
P15127	P15127	INSR_RAT	Insr	Insulin receptor	1	MRPTFLEIVNLLK	MRPTFLEIVNLLK	3	MRPTFLEIVNLLK3	2784.28	3979.07	1733.06
P97881	P97881	MUC13_RAT	Muc13	Mucin-13	1	MRPTGFSNFGADTSIFPK	MRPTGFSNFGADTSIFPK	3	MRPTGFSNFGADTSIFPK3	2117.08	3705.95	6435.08
D4ABM5	D4ABM5	D4ABM5_RAT	Mrps34	Mitochondrial ribosomal protein S34	1	MRPWDYPAK	MRPWDYPAK	3	MRPWDYPAK3	5824.64	6425.29	10584.1
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	MSACSKPIVPGGIINPGSRPPFK	MSAC(UniMod:4)SKPIVPGGIINPGSRPPFK	4	MSAC(UniMod:4)SKPIVPGGIINPGSRPPFK4	30641.4	30193.8	31176.5
P0C8E4	P0C8E4	M3K7_RAT	Map3k7	Mitogen-activated protein kinase kinase kinase 7	1	MSADMSEIEAR	MSADMSEIEAR	2	MSADMSEIEAR2	5021.33	4834.99	7115.94
Q4G009	Q4G009	MCTS1_RAT	Mcts1	Malignant T-cell-amplified sequence 1	1	MSAEDIEK	MSAEDIEK	2	MSAEDIEK2		11261.2	10714.4
A0A8I5ZXL6	A0A8I5ZXL6	A0A8I5ZXL6_RAT	Plekha7	Pleckstrin homology domain containing A7	1	MSAEEQLER	MSAEEQLER	2	MSAEEQLER2	9414.3	3409.13	10935.5
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	MSAEINEIIR	MSAEINEIIR	2	MSAEINEIIR2	545212	483164	522944
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	MSAIIFTCDENEDIGRPEVFSEDR	MSAIIFTC(UniMod:4)DENEDIGRPEVFSEDR	3	MSAIIFTC(UniMod:4)DENEDIGRPEVFSEDR3	11428.2	21837.2	12756.8
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	MSALEQVDHWSNK	MSALEQVDHWSNK	3	MSALEQVDHWSNK3	18330.6	22099.3	18091.4
Q6MG59	Q6MG59	G6B_RAT	Mpig6b	Megakaryocyte and platelet inhibitory receptor G6b	1	MSALVPGDASTVYAVVV	MSALVPGDASTVYAVVV	2	MSALVPGDASTVYAVVV2	46155.6	33028	49076.4
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	MSANGWWR	MSANGWWR	2	MSANGWWR2	24173.3	25304.3	22045.5
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	MSAQELSNGIPDSGHLYAALR	MSAQELSNGIPDSGHLYAALR	3	MSAQELSNGIPDSGHLYAALR3	15735.2	12938.7	18775.4
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	MSAQTHGLLGQFFQPFDFK	MSAQTHGLLGQFFQPFDFK	3	MSAQTHGLLGQFFQPFDFK3	741085	909746	766244
Q63965	Q63965	SFXN1_RAT	Sfxn1	Sideroflexin-1	1	MSAQVPMNMTITGCMMTFYR	MSAQVPMNMTITGC(UniMod:4)MMTFYR	3	MSAQVPMNMTITGC(UniMod:4)MMTFYR3	8434.5	5506.18	8368.81
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	MSASDPNSSIFLTDTAK	MSASDPNSSIFLTDTAK	2	MSASDPNSSIFLTDTAK2	29531.2	26783.8	25119.3
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	MSASILLSK	MSASILLSK	2	MSASILLSK2	24594.7	30385.8	35326.3
P85108	Q6P9T8;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	MSATFIGNSTAIQELFK	MSATFIGNSTAIQELFK	2	MSATFIGNSTAIQELFK2	5.44759e+06	3.56235e+06	5.37042e+06
P85108	Q6P9T8;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	MSATFIGNSTAIQELFK	MSATFIGNSTAIQELFK	3	MSATFIGNSTAIQELFK3	49718.1	58464.8	55186.3
P85108	Q6P9T8;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	MSATFIGNSTAIQELFKR	MSATFIGNSTAIQELFKR	3	MSATFIGNSTAIQELFKR3	212443	290370	321248
P08650	P08650	CO5_RAT	C5	Complement C5	1	MSAVEGICTPGSSAASPQTSR	MSAVEGIC(UniMod:4)TPGSSAASPQTSR	3	MSAVEGIC(UniMod:4)TPGSSAASPQTSR3	285999	230104	234194
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	MSCMDNK	MSC(UniMod:4)MDNK	1	MSC(UniMod:4)MDNK1	159645		69042.1
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	MSCMDNK	MSC(UniMod:4)MDNK	2	MSC(UniMod:4)MDNK2	2.06045e+06		736648
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	MSCTCLGNGK	MSC(UniMod:4)TC(UniMod:4)LGNGK	2	MSC(UniMod:4)TC(UniMod:4)LGNGK2	76881.1	73496.3	76447.5
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	MSCTCLGNGKGEFK	MSC(UniMod:4)TC(UniMod:4)LGNGKGEFK	2	MSC(UniMod:4)TC(UniMod:4)LGNGKGEFK2	3053.15	2925.47	1312.45
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	MSCTCLGNGKGEFK	MSC(UniMod:4)TC(UniMod:4)LGNGKGEFK	3	MSC(UniMod:4)TC(UniMod:4)LGNGKGEFK3	47361.4	56017.8	56363.8
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	MSCVDINECDEAEATSPLCVNAR	MSC(UniMod:4)VDINEC(UniMod:4)DEAEATSPLC(UniMod:4)VNAR	3	MSC(UniMod:4)VDINEC(UniMod:4)DEAEATSPLC(UniMod:4)VNAR3	8308.95	6392.48	8554.61
F1M9Z5	F1M9Z5	F1M9Z5_RAT	Cd300le	Cd300 molecule-like family member E	1	MSDADVYWCGITK	MSDADVYWC(UniMod:4)GITK	2	MSDADVYWC(UniMod:4)GITK2	226931	237336	215113
F1M9Z5	F1M9Z5	F1M9Z5_RAT	Cd300le	Cd300 molecule-like family member E	1	MSDADVYWCGITK	MSDADVYWC(UniMod:4)GITK	3	MSDADVYWC(UniMod:4)GITK3	14668.4	14650.8	10500.2
Q5M7A4	Q5M7A4	UBA5_RAT	Uba5	Ubiquitin-like modifier-activating enzyme 5	1	MSDEVVDSNPYSR	MSDEVVDSNPYSR	2	MSDEVVDSNPYSR2	164249	159787	189220
Q32KK2	Q32KK2	Q32KK2_RAT	Arsa	Arylsulfatase A	1	MSDGGCSGLLR	MSDGGC(UniMod:4)SGLLR	2	MSDGGC(UniMod:4)SGLLR2	5287.22	5813.29	3024.85
Q99NA5	Q99NA5	IDH3A_RAT	Idh3a	Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial	1	MSDGLFLQK	MSDGLFLQK	2	MSDGLFLQK2	141205	136744	160476
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	MSDILAEGITIVEDINK	MSDILAEGITIVEDINK	2	MSDILAEGITIVEDINK2	6258.27	13997.4	32121.3
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	MSDILAEGITIVEDINK	MSDILAEGITIVEDINK	3	MSDILAEGITIVEDINK3	15059.5	2155.53	14104.6
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	MSDILAEGITIVEDINKR	MSDILAEGITIVEDINKR	3	MSDILAEGITIVEDINKR3	67650.2	64877.8	77314.3
A0A8I5ZQH9	A0A8I5ZQH9	A0A8I5ZQH9_RAT	Dcaf6	DDB1 and CUL4 associated factor 6	1	MSDMLSR	MSDMLSR	2	MSDMLSR2	8767.81		7633.62
A0A8I5ZS67	A0A8I5ZS67	A0A8I5ZS67_RAT	Gigyf2	GRB10 interacting GYF protein 2	1	MSDQNIIPSVTR	MSDQNIIPSVTR	2	MSDQNIIPSVTR2	13040.5	13947	11372.3
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	MSDSPSHVATK	MSDSPSHVATK	3	MSDSPSHVATK3	8695.71		9542.06
F1M332	F1M332	F1M332_RAT	Arhgap28	Rho GTPase activating protein 28	1	MSDVPEGVIR	MSDVPEGVIR	2	MSDVPEGVIR2	20235.4	32506.5	15159.3
D3ZUV2	Q6AYH3;D3ZUV2	D3ZUV2_RAT	Mib1	RING-type E3 ubiquitin transferase	0	MSECPICR	MSEC(UniMod:4)PIC(UniMod:4)R	2	MSEC(UniMod:4)PIC(UniMod:4)R2	6889.63	7708.7	8102.7
A0A8I5Y661	A0A8I5Y661	A0A8I5Y661_RAT	Fam177a1	Family with sequence similarity 177, member A1	1	MSEEAER	MSEEAER	2	MSEEAER2			14697
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	MSEEQLVELR	MSEEQLVELR	2	MSEEQLVELR2	36196.4	39012.6	37039.9
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	MSEGSYDIALIK	MSEGSYDIALIK	2	MSEGSYDIALIK2	151815	169217	142519
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	MSEHYWTPQSNVSNETSTGK	MSEHYWTPQSNVSNETSTGK	3	MSEHYWTPQSNVSNETSTGK3	31527.6	29215.8	38717.7
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	MSELCIDFNK	MSELC(UniMod:4)IDFNK	2	MSELC(UniMod:4)IDFNK2	4544.49	1698.34	1503.73
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	MSELQVTLDPVQLESSLLR	MSELQVTLDPVQLESSLLR	3	MSELQVTLDPVQLESSLLR3	3659.13	4663.71	10283.4
D4A0G9	D4A0G9	D4A0G9_RAT	Ercc6l	ERCC excision repair 6 like, spindle assembly checkpoint helicase	1	MSENLMEIIKPYFLR	MSENLMEIIKPYFLR	3	MSENLMEIIKPYFLR3	6445.8	9192.27	4370.65
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	MSEQLNDLTYDMEILQPLLEQR	MSEQLNDLTYDMEILQPLLEQR	3	MSEQLNDLTYDMEILQPLLEQR3	49747	37580.9	35848.3
P63012	P63012	RAB3A_RAT	Rab3a	Ras-related protein Rab-3A	1	MSESLDTADPAVTGAK	MSESLDTADPAVTGAK	2	MSESLDTADPAVTGAK2	11026	2703.97	5308.22
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	MSEVANLWK	MSEVANLWK	2	MSEVANLWK2	23597.6	19286.9	22744.7
A0A8I6ASM9	A0A8I6ASM9	A0A8I6ASM9_RAT	Smdt1	Essential MCU regulator, mitochondrial	1	MSFGLLR	MSFGLLR	2	MSFGLLR2	71684.1	56719.5	49521.6
Q0PMD2	Q0PMD2	ANTR1_RAT	Antxr1	Anthrax toxin receptor 1	1	MSFIVFSTR	MSFIVFSTR	2	MSFIVFSTR2	54379.4	36495.2	38009.8
D4A7H9	D4A7H9	D4A7H9_RAT	Chmp7	Charged multivesicular body protein 7	1	MSFLFSAFK	MSFLFSAFK	2	MSFLFSAFK2	7855.52	11653.6	9913.89
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	MSFQKPK	MSFQKPK	2	MSFQKPK2	19306.8	14763.9	15963.3
Q7TP48	Q7TP48	APMAP_RAT	Apmap	Adipocyte plasma membrane-associated protein	1	MSFVNDLTITR	MSFVNDLTITR	2	MSFVNDLTITR2	59316.1	67366.8	67185.1
D3ZRJ7	D3ZRJ7	D3ZRJ7_RAT	Lrrk1	non-specific serine/threonine protein kinase	1	MSFVPVGFWQR	MSFVPVGFWQR	2	MSFVPVGFWQR2			10515.2
Q9EQH1	Q9EQH1	GAB2_RAT	Gab2	GRB2-associated-binding protein 2	1	MSGDPDVLEYYK	MSGDPDVLEYYK	2	MSGDPDVLEYYK2	13118.4	21855.6	3596.11
Q66HG9	Q66HG9	MAVS_RAT	Mavs	Mitochondrial antiviral-signaling protein	1	MSGDSLISSPNPPALSPQPSR	MSGDSLISSPNPPALSPQPSR	3	MSGDSLISSPNPPALSPQPSR3	83670.2	105076	112557
Q9JK66	Q9JK66	PRKN_RAT	Prkn	E3 ubiquitin-protein ligase parkin	1	MSGECQSPDCPGTR	MSGEC(UniMod:4)QSPDC(UniMod:4)PGTR	2	MSGEC(UniMod:4)QSPDC(UniMod:4)PGTR2	4257.73	2888.35	8282.73
A0A8I6ABZ7	A0A8I6ABZ7	A0A8I6ABZ7_RAT	Dhx9	RNA helicase	1	MSGEEAEIR	MSGEEAEIR	2	MSGEEAEIR2	8496.01	7118.65	3627.53
O55043	O55043	ARHG7_RAT	Arhgef7	Rho guanine nucleotide exchange factor 7	1	MSGFIYQGK	MSGFIYQGK	2	MSGFIYQGK2	7160.12	14685.3	5239.03
D3ZGG8	D3ZGG8	D3ZGG8_RAT	Hps3	Hermansky-Pudlak syndrome 3 protein homolog	1	MSGLSLAEVLAR	MSGLSLAEVLAR	2	MSGLSLAEVLAR2	6352.13	4028.4	2796.62
D3ZTW9	D3ZTW9	D3ZTW9_RAT	Exog	Exo/endonuclease G	1	MSGLVFFPHLDR	MSGLVFFPHLDR	3	MSGLVFFPHLDR3	12667.6	3724.98	21204.9
Q9QZR8	Q9QZR8	PDZD2_RAT	Pdzd2	PDZ domain-containing protein 2	1	MSHASSPSGPVATER	MSHASSPSGPVATER	3	MSHASSPSGPVATER3	6226.67	6204.35	3436.94
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	MSHHVWTAQNVDPASFLSTTLGNVLVTVK	MSHHVWTAQNVDPASFLSTTLGNVLVTVK	4	MSHHVWTAQNVDPASFLSTTLGNVLVTVK4	4076.84	2766.73	4879.51
B5DEN9	B5DEN9	VPS28_RAT	Vps28	Vacuolar protein sorting-associated protein 28 homolog	1	MSHLPPDFEGR	MSHLPPDFEGR	3	MSHLPPDFEGR3	7404.44	4778.99	4585.4
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	MSHSSSEAPENPSLLSETSAEWR	MSHSSSEAPENPSLLSETSAEWR	3	MSHSSSEAPENPSLLSETSAEWR3	2667.72	3853.93	2740.88
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	MSIIPQEPVLFTGTMR	MSIIPQEPVLFTGTMR	2	MSIIPQEPVLFTGTMR2	45228.3	66786.1	74069.4
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	MSIIPQEPVLFTGTMR	MSIIPQEPVLFTGTMR	3	MSIIPQEPVLFTGTMR3	7641.69	12659.5	8063.5
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	MSINAEDVVVGDLVEVK	MSINAEDVVVGDLVEVK	2	MSINAEDVVVGDLVEVK2	19368.4	15009.7	27609.6
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	MSINAEDVVVGDLVEVK	MSINAEDVVVGDLVEVK	3	MSINAEDVVVGDLVEVK3	8440.97	9930.63	7950
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	MSISEGTVSDK	MSISEGTVSDK	2	MSISEGTVSDK2	20869.2	18196.2	15255.2
A0A8I6ABN1	A0A8I6ABN1	A0A8I6ABN1_RAT	Snx19	Sorting nexin 19	1	MSIVDSHALTQR	MSIVDSHALTQR	3	MSIVDSHALTQR3	9256.97	12318.7	15148.2
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	MSLDAQAISNTFR	MSLDAQAISNTFR	2	MSLDAQAISNTFR2	221841	228207	229134
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	MSLDAQAISNTFR	MSLDAQAISNTFR	3	MSLDAQAISNTFR3	19650.5	21537	21761.3
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	MSLDYHFVTPLTSMTIR	MSLDYHFVTPLTSMTIR	3	MSLDYHFVTPLTSMTIR3	185019	200330	210748
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	MSLDYHFVTPLTSMTIR	MSLDYHFVTPLTSMTIR	4	MSLDYHFVTPLTSMTIR4	117051	158627	113932
Q66H62	Q66H62	CYLD_RAT	Cyld	Ubiquitin carboxyl-terminal hydrolase CYLD	1	MSLEDLHSLDSR	MSLEDLHSLDSR	3	MSLEDLHSLDSR3	6115.71	4716.16	9246.74
D3ZHW0	D3ZHW0	D3ZHW0_RAT	Dhx29	ATP-dependent RNA helicase DHX29	1	MSLENDK	MSLENDK	2	MSLENDK2	8499.12	8370.18	4288.09
B0BN65	B0BN65;A0A0G2JXI6	B0BN65_RAT	Cyria	CYFIP related Rac1 interactor A	0	MSLFYAEATPMLK	MSLFYAEATPMLK	2	MSLFYAEATPMLK2	81662.9	79229.5	87054.3
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	MSLHNLATVFGPTLLRPSEK	MSLHNLATVFGPTLLRPSEK	4	MSLHNLATVFGPTLLRPSEK4	30435.5	30110	21311.2
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	MSLIEEEGGK	MSLIEEEGGK	2	MSLIEEEGGK2	128350	108573	104821
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	MSLIEEEGGKR	MSLIEEEGGKR	2	MSLIEEEGGKR2	3414.34	4616.78	2007.96
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	MSLIEEEGGKR	MSLIEEEGGKR	3	MSLIEEEGGKR3	40437.7	32713.5	34179.9
Q9Z244	Q9Z244	GMPR1_RAT	Gmpr	GMP reductase 1	1	MSLILEAVPQVK	MSLILEAVPQVK	2	MSLILEAVPQVK2	80221.1	81239.4	94720.2
Q9Z244	Q9Z244	GMPR1_RAT	Gmpr	GMP reductase 1	1	MSLILEAVPQVK	MSLILEAVPQVK	3	MSLILEAVPQVK3	9601.76	11161.1	1659.5
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	MSLLFDHLEPMELAEHLTYLEYR	MSLLFDHLEPMELAEHLTYLEYR	3	MSLLFDHLEPMELAEHLTYLEYR3	3603.53	7052.33	1085.22
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	MSLLFDHLEPMELAEHLTYLEYR	MSLLFDHLEPMELAEHLTYLEYR	4	MSLLFDHLEPMELAEHLTYLEYR4	18726.7	26297.4	12225.1
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	MSLLLPEAGR	MSLLLPEAGR	2	MSLLLPEAGR2	48699.8	55633.8	38571
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	MSLLQLVEILR	MSLLQLVEILR	2	MSLLQLVEILR2		2624.21	28892.4
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	MSLLQLVEILR	MSLLQLVEILR	3	MSLLQLVEILR3		2285.6	1271.08
P54645	P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	1	MSLQLYQVDSR	MSLQLYQVDSR	2	MSLQLYQVDSR2	30400.5	33047.4	28960.3
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	MSLSLPLINR	MSLSLPLINR	2	MSLSLPLINR2	30109	33413.3	20408.4
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	MSLVEEGAVK	MSLVEEGAVK	2	MSLVEEGAVK2	11805.8	16208.3	8212.05
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	MSLVEEGAVKR	MSLVEEGAVKR	3	MSLVEEGAVKR3	2186.09		3557.88
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	MSLWGEHTGQMYSK	MSLWGEHTGQMYSK	2	MSLWGEHTGQMYSK2	130384	151885	146244
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	MSLWGEHTGQMYSK	MSLWGEHTGQMYSK	3	MSLWGEHTGQMYSK3	1.57359e+06	1.86208e+06	1.8474e+06
P85108	P69897;Q6P9T8;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	MSMKEVDEQMLNVQNK	MSMKEVDEQMLNVQNK	3	MSMKEVDEQMLNVQNK3	34091.2	33091.9	37230.5
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	MSMKIRPVFPQQ	MSMKIRPVFPQQ	3	MSMKIRPVFPQQ3		11743.9	9228.38
A0A0G2K098	A0A0G2K098	A0A0G2K098_RAT	Mcc	MCC regulator of WNT signaling pathway	1	MSMLVGK	MSMLVGK	2	MSMLVGK2	4601.17		
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	MSMMIRPEPR	MSMMIRPEPR	3	MSMMIRPEPR3	45349.9	58465.5	60944.8
P16636	P16636	LYOX_RAT	Lox	Protein-lysine 6-oxidase	1	MSMYNLR	MSMYNLR	2	MSMYNLR2	82977.5	61694.5	71285
Q7TP54	Q7TP54	RIPR2_RAT	Ripor2	Rho family-interacting cell polarization regulator 2	1	MSMYSQGTPETPTFK	MSMYSQGTPETPTFK	2	MSMYSQGTPETPTFK2	9755.17	10613.5	8735.35
Q2TGI9	Q2TGI9	Q2TGI9_RAT	Zdhhc21	Palmitoyltransferase	1	MSNCCEEISRPR	MSNC(UniMod:4)C(UniMod:4)EEISRPR	3	MSNC(UniMod:4)C(UniMod:4)EEISRPR3	82198.4	85779.7	80382.2
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	MSNGDGSESTVSADPVVK	MSNGDGSESTVSADPVVK	2	MSNGDGSESTVSADPVVK2	2431.22	986.059	1946.97
A0A8I6AI41	A0A8I6ASD7;A0A8I6GHG7;A0A8I6AI41	A0A8I6AI41_RAT	ENSRNOG00000066406	Ig-like domain-containing protein	0	MSNLASGVPDR	MSNLASGVPDR	2	MSNLASGVPDR2	251179	204952	210975
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	MSNYDTDLFVPYFEAIQK	MSNYDTDLFVPYFEAIQK	3	MSNYDTDLFVPYFEAIQK3		6321.66	7407.17
Q4V899	Q4V899	TM165_RAT	Tmem165	Transmembrane protein 165	1	MSPDEGQEELEEVQAELKK	MSPDEGQEELEEVQAELKK	3	MSPDEGQEELEEVQAELKK3	30851.7	34381	26705.4
A0A8I5ZPV1	A0A8I5ZPV1	A0A8I5ZPV1_RAT	Tbc1d22a	TBC1 domain family, member 22a	1	MSPEALILQPK	MSPEALILQPK	2	MSPEALILQPK2	11736.4	20960.2	16884.1
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	MSPFPLSPAASIVDK	MSPFPLSPAASIVDK	2	MSPFPLSPAASIVDK2	9301.1	13184.4	16906.6
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	MSPFPLSPAASIVDKLPECLINR	MSPFPLSPAASIVDKLPEC(UniMod:4)LINR	3	MSPFPLSPAASIVDKLPEC(UniMod:4)LINR3	38287.2	42801.1	52723.4
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	MSPFPLSPAASIVDKLPECLINRK	MSPFPLSPAASIVDKLPEC(UniMod:4)LINRK	4	MSPFPLSPAASIVDKLPEC(UniMod:4)LINRK4	3680.15	5942.33	5407.8
Q03555	Q03555	GEPH_RAT	Gphn	Gephyrin	1	MSPFPLTSMDK	MSPFPLTSMDK	2	MSPFPLTSMDK2	14164.3	14245.7	9742.84
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	MSPGALAIIFAPCLLR	MSPGALAIIFAPC(UniMod:4)LLR	2	MSPGALAIIFAPC(UniMod:4)LLR2		8541.98	18603
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	MSPGFSSNR	MSPGFSSNR	2	MSPGFSSNR2	26234.7	18332	21427.1
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	MSPGFSSNRDPLTQVPCENVMVR	MSPGFSSNRDPLTQVPC(UniMod:4)ENVMVR	3	MSPGFSSNRDPLTQVPC(UniMod:4)ENVMVR3	34410.5	49732.7	43657.4
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	MSPGNYGNTPR	MSPGNYGNTPR	2	MSPGNYGNTPR2	39949.6	32412	39118.2
A0A8I6GJS5	A0A8I6GJS5	A0A8I6GJS5_RAT	LOC100362814	RIKEN cDNA D430041D05 gene	1	MSPLIMTALR	MSPLIMTALR	2	MSPLIMTALR2	12595.5	12535.3	7527.59
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	MSPLSIVTVLVDK	MSPLSIVTVLVDK	2	MSPLSIVTVLVDK2	16839.8	24034.6	24705.2
Q0D2L6	Q0D2L6	Q0D2L6_RAT	Rragc	Ras-related GTP-binding protein	1	MSPNETLFLESTNK	MSPNETLFLESTNK	2	MSPNETLFLESTNK2	18475.9	16430.3	23990.6
Q0D2L6	Q0D2L6	Q0D2L6_RAT	Rragc	Ras-related GTP-binding protein	1	MSPNETLFLESTNK	MSPNETLFLESTNK	3	MSPNETLFLESTNK3	3453.99	3258.12	2197.15
A0A1W2Q642	A0A1W2Q642	A0A1W2Q642_RAT	Pi16	Peptidase inhibitor 16	1	MSPTETGESPPQIQEEAEPK	MSPTETGESPPQIQEEAEPK	3	MSPTETGESPPQIQEEAEPK3	1.38715e+06	1.50946e+06	1.58127e+06
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	MSPVPDLVPGSFK	MSPVPDLVPGSFK	2	MSPVPDLVPGSFK2	2.87726e+07	2.73017e+07	2.58951e+07
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	MSPVPDLVPGSFK	MSPVPDLVPGSFK	3	MSPVPDLVPGSFK3	334771	195787	271903
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	MSQALGR	MSQALGR	2	MSQALGR2	82884.7	86734.9	97389.1
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	MSQEHPSQASEAELAQR	MSQEHPSQASEAELAQR	3	MSQEHPSQASEAELAQR3	9661.06	11928.4	16102.7
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	MSQGFQFERDPSTLK	MSQGFQFERDPSTLK	3	MSQGFQFERDPSTLK3	6580.15	9493.28	14697
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	MSQLEVK	MSQLEVK	2	MSQLEVK2	34871.9	18214.9	29644.8
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	MSQNFHTSYVETLGK	MSQNFHTSYVETLGK	3	MSQNFHTSYVETLGK3	31182.3	40198	38768.9
P02770	P02770	ALBU_RAT	Alb	Albumin	1	MSQRFPNAEFAEITK	MSQRFPNAEFAEITK	3	MSQRFPNAEFAEITK3	21385.9	28801.8	23033.3
F1LTR1	F1LTR1	WDR26_RAT	Wdr26	WD repeat-containing protein 26	1	MSQSHEDSLTSVAWNPDGK	MSQSHEDSLTSVAWNPDGK	3	MSQSHEDSLTSVAWNPDGK3	20826.7	17064	12412.7
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	MSQSIIVSGESGAGK	MSQSIIVSGESGAGK	2	MSQSIIVSGESGAGK2	21384.6	22759.2	23051.5
Q5BJW9	Q5BJW9	DJC25_RAT	Dnajc25	DnaJ homolog subfamily C member 25	1	MSQSQFDSLEDHQK	MSQSQFDSLEDHQK	3	MSQSQFDSLEDHQK3		2265.43	4805.24
Q5EB81	Q5EB81	NB5R1_RAT	Cyb5r1	NADH-cytochrome b5 reductase 1	1	MSQYLDSLK	MSQYLDSLK	2	MSQYLDSLK2	15537.3	16938.5	18557.4
P20070	P20070	NB5R3_RAT	Cyb5r3	NADH-cytochrome b5 reductase 3	1	MSQYLENMNIGDTIEFR	MSQYLENMNIGDTIEFR	3	MSQYLENMNIGDTIEFR3	31868.8	33948.8	44380.6
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	MSSDDGIR	MSSDDGIR	2	MSSDDGIR2	243695	214044	235122
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	MSSDLLGLALK	MSSDLLGLALK	2	MSSDLLGLALK2	96315.3	71936.7	78469.9
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	MSSEDLTLLLR	MSSEDLTLLLR	2	MSSEDLTLLLR2		3688.38	4372.92
Q5U1Z2	Q5U1Z2	TPPC3_RAT	Trappc3	Trafficking protein particle complex subunit 3	1	MSSELFTLTYGALVTQLCK	MSSELFTLTYGALVTQLC(UniMod:4)K	3	MSSELFTLTYGALVTQLC(UniMod:4)K3	6724.48	6165.29	3472.12
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	MSSEMETNIVAVER	MSSEMETNIVAVER	2	MSSEMETNIVAVER2	3336.36	795.985	3069.7
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	MSSFNLSR	MSSFNLSR	2	MSSFNLSR2	31618.6	20751.4	35296.5
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	MSSHTETSSFLQTLTGR	MSSHTETSSFLQTLTGR	2	MSSHTETSSFLQTLTGR2	2730.72	916.756	
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	MSSHTETSSFLQTLTGR	MSSHTETSSFLQTLTGR	3	MSSHTETSSFLQTLTGR3	18265.2	21183.9	10038.3
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	MSSNSNFSEVTLAGLASR	MSSNSNFSEVTLAGLASR	2	MSSNSNFSEVTLAGLASR2	13291.3	12223.7	13273.4
Q4QRB4	Q4QRB4	TBB3_RAT	Tubb3	Tubulin beta-3 chain	1	MSSTFIGNSTAIQELFK	MSSTFIGNSTAIQELFK	2	MSSTFIGNSTAIQELFK2	44317.7	44002.5	53371.6
Q4QRB4	Q4QRB4	TBB3_RAT	Tubb3	Tubulin beta-3 chain	1	MSSTFIGNSTAIQELFK	MSSTFIGNSTAIQELFK	3	MSSTFIGNSTAIQELFK3	18135.9	23514.5	32640.3
Q64303	Q64303	PAK2_RAT	Pak2	Serine/threonine-protein kinase PAK 2	1	MSSTIFSTGGK	MSSTIFSTGGK	2	MSSTIFSTGGK2	9892.16	5996.75	10719.8
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	MSSTIQFTPTEISR	MSSTIQFTPTEISR	2	MSSTIQFTPTEISR2	211986	192176	215479
O88483	O88483	PDP1_RAT	Pdp1	[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial	1	MSSVFEDQNAATHLIR	MSSVFEDQNAATHLIR	3	MSSVFEDQNAATHLIR3	2768.94	4388.85	
A0A0G2K089	A0A0G2K089	A0A0G2K089_RAT	Dennd4c	DENN domain containing 4C	1	MSSVPNSLSK	MSSVPNSLSK	2	MSSVPNSLSK2	9617.78	10712	7334.58
P63159	P52925;A0A8I6GBU6;A0A8I6GKR4;D3ZIU9;D3ZN59;P63159;D3ZC69;A0A8I6GJ73;A0A8I6A2H1;A0A8I5Y7D7;A0A0G2K6P4	HMGB1_RAT	Hmgb1	High mobility group protein B1	0	MSSYAFFVQTCR	MSSYAFFVQTC(UniMod:4)R	2	MSSYAFFVQTC(UniMod:4)R2	5063.31	6044.45	2888.87
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	MSTEEIVQR	MSTEEIVQR	2	MSTEEIVQR2	163539	154188	175254
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	MSTETEETDGPLR	MSTETEETDGPLR	2	MSTETEETDGPLR2	87012.8	84780	69019.2
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	MSTGPDIHHFIMGSEGTLGVITEATIK	MSTGPDIHHFIMGSEGTLGVITEATIK	4	MSTGPDIHHFIMGSEGTLGVITEATIK4	23589.1	13320.2	19523.7
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	MSTGTFVVSQPLNYR	MSTGTFVVSQPLNYR	2	MSTGTFVVSQPLNYR2	22525	13594.6	32045.2
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	MSTGTFVVSQPLNYR	MSTGTFVVSQPLNYR	3	MSTGTFVVSQPLNYR3	6701.62	4180.93	7846.69
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	MSTKEVDQQLLSIQTR	MSTKEVDQQLLSIQTR	3	MSTKEVDQQLLSIQTR3	5266.69	14157	10710.1
Q63524	Q63524	TMED2_RAT	Tmed2	Transmembrane emp24 domain-containing protein 2	1	MSTMTPK	MSTMTPK	1	MSTMTPK1	4008.37	3137.86	5241.31
Q63524	Q63524	TMED2_RAT	Tmed2	Transmembrane emp24 domain-containing protein 2	1	MSTMTPK	MSTMTPK	2	MSTMTPK2	453852	462853	459671
Q06486	Q06486;Q9JJ76	KC1D_RAT	Csnk1d	Casein kinase I isoform delta	0	MSTPIEVLCK	MSTPIEVLC(UniMod:4)K	2	MSTPIEVLC(UniMod:4)K2	25091.3	21336.9	18987
F7F4L4	F7F4L4	F7F4L4_RAT	Dnajb12	DnaJ heat shock protein family (Hsp40) member B12	1	MSTPSCSR	MSTPSC(UniMod:4)SR	2	MSTPSC(UniMod:4)SR2	16415.4	14998.3	18530.1
P97633	P97633	KC1A_RAT	Csnk1a1	Casein kinase I isoform alpha	1	MSTPVEVLCK	MSTPVEVLC(UniMod:4)K	2	MSTPVEVLC(UniMod:4)K2	4961	2004.87	
B2RYP8	B2RYP8	B2RYP8_RAT	Tubgcp2	Gamma-tubulin complex component	1	MSTQELEELRK	MSTQELEELRK	3	MSTQELEELRK3	14836.9	16581.4	11640.2
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	MSTQVEQFVSR	MSTQVEQFVSR	2	MSTQVEQFVSR2	505933	607937	569086
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	MSTQVEQFVSR	MSTQVEQFVSR	3	MSTQVEQFVSR3	3490.13	10679.8	25595.4
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	MSTSYEER	MSTSYEER	2	MSTSYEER2	11466.8	16279.3	14438.9
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	MSTTLSSLK	MSTTLSSLK	2	MSTTLSSLK2	113751	111769	116960
F1LVL2	F1LVL2	F1LVL2_RAT	Icoslg	Inducible T-cell co-stimulator ligand	1	MSTVLGK	MSTVLGK	1	MSTVLGK1	27026.8	20358.2	16423.8
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	MSVDNLATVIGVNLIR	MSVDNLATVIGVNLIR	2	MSVDNLATVIGVNLIR2	2818.38	671.283	3083.67
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	MSVDNLATVIGVNLIR	MSVDNLATVIGVNLIR	3	MSVDNLATVIGVNLIR3	2504.7	6468.71	1803.57
Q6IFU8	Q63279;Q6IFU7;Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	0	MSVEADINGLR	MSVEADINGLR	2	MSVEADINGLR2	13489.7	4713.84	7534.81
Q6IFU8	Q63279;Q6IFU7;Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	0	MSVEADINGLRR	MSVEADINGLRR	3	MSVEADINGLRR3	23923.7	34643.9	30235
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	MSVFIVGIDPTGAAGR	MSVFIVGIDPTGAAGR	2	MSVFIVGIDPTGAAGR2	7403.6	14997.6	12624.7
Q4KM64	Q4KM64	JAGN1_RAT	Jagn1	Protein jagunal homolog 1	1	MSVGHLR	MSVGHLR	2	MSVGHLR2	5404.68	3564.91	
P53534	P53534	PYGB_RAT	Pygb	Glycogen phosphorylase, brain form (Fragment)	1	MSVIEEGDCK	MSVIEEGDC(UniMod:4)K	2	MSVIEEGDC(UniMod:4)K2	4923.25	4415.42	9040.72
P53534	P53534	PYGB_RAT	Pygb	Glycogen phosphorylase, brain form (Fragment)	1	MSVIEEGDCKR	MSVIEEGDC(UniMod:4)KR	3	MSVIEEGDC(UniMod:4)KR3	4194.79	5371.49	3715.75
A0A8I6A6I4	A0A8I6A6I4	A0A8I6A6I4_RAT	Atp11b	Phospholipid-transporting ATPase	1	MSVIVQAPSGEK	MSVIVQAPSGEK	2	MSVIVQAPSGEK2	14247.1	12693.2	16642.3
P47942	P47942;Q62952	DPYL2_RAT	Dpysl2	Dihydropyrimidinase-related protein 2	0	MSVIWDK	MSVIWDK	2	MSVIWDK2	34941.5	29960.2	28352.4
M0R5F1	M0R5F1	M0R5F1_RAT	Aspn	Asporin	1	MSVQLGNVGK	MSVQLGNVGK	2	MSVQLGNVGK2	1637.05	1624.06	
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	MSVQLTQLK	MSVQLTQLK	2	MSVQLTQLK2	11938.1	15732.8	8709.93
P13084	D3ZXI2;A0A8I6ANY4;P13084	NPM_RAT	Npm1	Nucleophosmin	0	MSVQPTVSLGGFEITPPVVLR	MSVQPTVSLGGFEITPPVVLR	3	MSVQPTVSLGGFEITPPVVLR3	85373.5	82551.6	
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	MSVSTLVLQEGATEAEISVTSTQWR	MSVSTLVLQEGATEAEISVTSTQWR	3	MSVSTLVLQEGATEAEISVTSTQWR3	98854.4	119141	115244
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	MSVSTLVLQEGATEAEISVTSTQWR	MSVSTLVLQEGATEAEISVTSTQWR	4	MSVSTLVLQEGATEAEISVTSTQWR4	20774.3	10687.8	5805.49
Q5PQM0	Q5PQM0	TM168_RAT	Tmem168	Transmembrane protein 168	1	MSWFLPTVLDTGQGFK	MSWFLPTVLDTGQGFK	2	MSWFLPTVLDTGQGFK2	17782	12443.9	24467.6
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	MSYCYAK	MSYC(UniMod:4)YAK	2	MSYC(UniMod:4)YAK2	30916	37789.4	36465.7
Q63616	Q63616	VP33B_RAT	Vps33b	Vacuolar protein sorting-associated protein 33B	1	MSYDLWR	MSYDLWR	2	MSYDLWR2	22787.9	17610.5	12370.6
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	MSYETQITPR	MSYETQITPR	2	MSYETQITPR2	6946.47	8720.33	3406.05
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	MSYETQITPRPQPESVSCVLQEPK	MSYETQITPRPQPESVSC(UniMod:4)VLQEPK	3	MSYETQITPRPQPESVSC(UniMod:4)VLQEPK3	6659.91	10005.3	6658.24
M0R7E7	M0R7E7	M0R7E7_RAT	Map2k3	Mitogen activated protein kinase kinase 3	1	MSYLELMEHPFFTLHK	MSYLELMEHPFFTLHK	3	MSYLELMEHPFFTLHK3	7584.91	6905.53	8445.86
M0R7E7	M0R7E7	M0R7E7_RAT	Map2k3	Mitogen activated protein kinase kinase 3	1	MSYLELMEHPFFTLHK	MSYLELMEHPFFTLHK	4	MSYLELMEHPFFTLHK4	8326.25	18071.6	11473.6
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	MSYLLLPLDSSK	MSYLLLPLDSSK	2	MSYLLLPLDSSK2	16618.1	15904.5	16238.2
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	MSYYCSGNSDVPGSTAAPRPVSK	MSYYC(UniMod:4)SGNSDVPGSTAAPRPVSK	3	MSYYC(UniMod:4)SGNSDVPGSTAAPRPVSK3	47533.3	41195.3	55405.3
D3ZZA8	D3ZZA8	D3ZZA8_RAT	Sec24a	SEC24 homolog A, COPII coat complex component	1	MTAFISWLR	MTAFISWLR	2	MTAFISWLR2	1429.96		2256.04
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	MTAFIVER	MTAFIVER	2	MTAFIVER2	37573.1	36220.1	46251
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	MTAIIFSDYR	MTAIIFSDYR	2	MTAIIFSDYR2	48810.9	46303.9	45702.5
P32198	P32198	CPT1A_RAT	Cpt1a	Carnitine O-palmitoyltransferase 1, liver isoform	1	MTALAQDFAVNLGPK	MTALAQDFAVNLGPK	2	MTALAQDFAVNLGPK2	5098.91	5870.19	3088.01
Q5BJT7	Q5BJT7	CCD93_RAT	Ccdc93	Coiled-coil domain-containing protein 93	1	MTAMANEESR	MTAMANEESR	2	MTAMANEESR2	13338.2	14309.8	6767.05
P35435	P35435	ATPG_RAT	Atp5f1c	ATP synthase subunit gamma, mitochondrial	1	MTAMDNASK	MTAMDNASK	1	MTAMDNASK1	3633.8	2220.72	1253.37
P35435	P35435	ATPG_RAT	Atp5f1c	ATP synthase subunit gamma, mitochondrial	1	MTAMDNASK	MTAMDNASK	2	MTAMDNASK2	870260	894575	902403
D3ZRN5	D3ZRN5	D3ZRN5_RAT	Ro60	Ro60, Y RNA binding protein	1	MTANSVLEPGSSEVSLVCEK	MTANSVLEPGSSEVSLVC(UniMod:4)EK	3	MTANSVLEPGSSEVSLVC(UniMod:4)EK3	3257.87	2557.72	
A0A8I5YBR2	A0A8I5YBR2	A0A8I5YBR2_RAT	Cops6	COP9 signalosome complex subunit 6	1	MTATGSGENSTVAEHLIAQHSAIK	MTATGSGENSTVAEHLIAQHSAIK	3	MTATGSGENSTVAEHLIAQHSAIK3	15819.2	13899.6	10428.1
A0A8I5YBR2	A0A8I5YBR2	A0A8I5YBR2_RAT	Cops6	COP9 signalosome complex subunit 6	1	MTATGSGENSTVAEHLIAQHSAIK	MTATGSGENSTVAEHLIAQHSAIK	4	MTATGSGENSTVAEHLIAQHSAIK4	57935.3	50427.5	42742.4
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	MTAVFEK	MTAVFEK	2	MTAVFEK2	8251.66	14889.1	7149.24
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	MTAVNVAMVMAPNLFMCHALGLK	MTAVNVAMVMAPNLFMC(UniMod:4)HALGLK	3	MTAVNVAMVMAPNLFMC(UniMod:4)HALGLK3		2408.17	3967.22
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	MTCDSYPIR	MTC(UniMod:4)DSYPIR	2	MTC(UniMod:4)DSYPIR2	16637.2	10244.8	18777.2
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	MTCDSYPIRR	MTC(UniMod:4)DSYPIRR	3	MTC(UniMod:4)DSYPIRR3	34785.8	53563.4	49928.6
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	MTCEYTWPNHLLGSDR	MTC(UniMod:4)EYTWPNHLLGSDR	3	MTC(UniMod:4)EYTWPNHLLGSDR3	31257.7	42437.5	27890.3
Q66H12	Q66H12	NAGAB_RAT	Naga	Alpha-N-acetylgalactosaminidase	1	MTCMGYPGTTLDK	MTC(UniMod:4)MGYPGTTLDK	2	MTC(UniMod:4)MGYPGTTLDK2	43067	34828.4	39528.5
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	MTCVDVNECSELNNR	MTC(UniMod:4)VDVNEC(UniMod:4)SELNNR	2	MTC(UniMod:4)VDVNEC(UniMod:4)SELNNR2	87944.3	70679.4	72398.8
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	MTCVDVNECSELNNR	MTC(UniMod:4)VDVNEC(UniMod:4)SELNNR	3	MTC(UniMod:4)VDVNEC(UniMod:4)SELNNR3	4539.12	10033.6	11152.8
Q64303	Q64303	PAK2_RAT	Pak2	Serine/threonine-protein kinase PAK 2	1	MTDEEIMEK	MTDEEIMEK	2	MTDEEIMEK2	54200.2	44181.2	64449
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	MTDIMTEGITIVEDINK	MTDIMTEGITIVEDINK	2	MTDIMTEGITIVEDINK2	4120.58	2453	3609.79
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	MTDIMTEGITIVEDINK	MTDIMTEGITIVEDINK	3	MTDIMTEGITIVEDINK3	5122.41	5969.53	4639.12
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	MTDIMTEGITIVEDINKR	MTDIMTEGITIVEDINKR	3	MTDIMTEGITIVEDINKR3	30528.9	39049.3	39454.2
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	MTDLLEEGVTVIENIYK	MTDLLEEGVTVIENIYK	3	MTDLLEEGVTVIENIYK3			3324.95
P70541	P70541	EI2BG_RAT	Eif2b3	Translation initiation factor eIF-2B subunit gamma	1	MTDLTSSIPK	MTDLTSSIPK	2	MTDLTSSIPK2	4646.11	13400.6	3936.68
P70541	P70541	EI2BG_RAT	Eif2b3	Translation initiation factor eIF-2B subunit gamma	1	MTDLTSSIPKPLLPVGNKPLIWYPLNLLER	MTDLTSSIPKPLLPVGNKPLIWYPLNLLER	4	MTDLTSSIPKPLLPVGNKPLIWYPLNLLER4	12472.9	3313.77	10967.4
P11348	P11348	DHPR_RAT	Qdpr	Dihydropteridine reductase	1	MTDSFTEQADQVTAEVGK	MTDSFTEQADQVTAEVGK	2	MTDSFTEQADQVTAEVGK2	6787.56	3952.04	5811.78
P11348	P11348	DHPR_RAT	Qdpr	Dihydropteridine reductase	1	MTDSFTEQADQVTAEVGK	MTDSFTEQADQVTAEVGK	3	MTDSFTEQADQVTAEVGK3	12831.6	16360.8	15056.5
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	MTDSHISHAHVTIR	MTDSHISHAHVTIR	4	MTDSHISHAHVTIR4	23052.3	23922.7	37641.9
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	MTDVAVR	MTDVAVR	2	MTDVAVR2	73875.5	68921.8	75705.6
B2RZ77	B2RZ77	B2RZ77_RAT	Dpt	Dermatopontin	1	MTDYDCEFENV	MTDYDC(UniMod:4)EFENV	2	MTDYDC(UniMod:4)EFENV2	224514	233267	255555
Q6Q0N1	Q6Q0N1	CNDP2_RAT	Cndp2	Cytosolic non-specific dipeptidase	1	MTEAAAADVQR	MTEAAAADVQR	2	MTEAAAADVQR2	24022.6	14092.4	11150.4
Q63369	Q63369	NFKB1_RAT	Nfkb1	Nuclear factor NF-kappa-B p105 subunit	1	MTEACIR	MTEAC(UniMod:4)IR	2	MTEAC(UniMod:4)IR2	18472.6	28188.4	21771.8
D3ZUB7	D3ZUB7	D3ZUB7_RAT	Anapc4	Anaphase-promoting complex subunit 4	1	MTEDHVLPELNK	MTEDHVLPELNK	3	MTEDHVLPELNK3	4705.37	4559.21	3914.84
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	MTEELEALR	MTEELEALR	2	MTEELEALR2	20832.1	18510.2	23802.5
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	MTEELETLR	MTEELETLR	2	MTEELETLR2	100537	108781	103012
Q9R1B1	Q9R1B1	T10B_RAT	Timm10b	Mitochondrial import inner membrane translocase subunit Tim10 B	1	MTELCFQR	MTELC(UniMod:4)FQR	2	MTELC(UniMod:4)FQR2	24744.5	37206.8	35829.7
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	MTELFQSLGDLNNVR	MTELFQSLGDLNNVR	2	MTELFQSLGDLNNVR2	119169	106824	128605
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	MTELFQSLGDLNNVR	MTELFQSLGDLNNVR	3	MTELFQSLGDLNNVR3	53955.3	48264.6	55249.9
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	MTEQPMMCAYCVTEPSAGSDVAGIK	MTEQPMMC(UniMod:4)AYC(UniMod:4)VTEPSAGSDVAGIK	3	MTEQPMMC(UniMod:4)AYC(UniMod:4)VTEPSAGSDVAGIK3	44972.9	51536.1	49888.6
D3ZWA8	D3ZWA8	D3ZWA8_RAT	Appl1	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1	1	MTESHLLVTCDCLK	MTESHLLVTC(UniMod:4)DC(UniMod:4)LK	3	MTESHLLVTC(UniMod:4)DC(UniMod:4)LK3	5631.43	3602.76	6195.68
Q63862	Q63862	MYH11_RAT	Myh11	Myosin-11	1	MTESSLPSASK	MTESSLPSASK	2	MTESSLPSASK2	5518.38	6735.28	3290.49
D3Z7Z5	D3Z7Z5	D3Z7Z5_RAT	Ranbp10	RAN binding protein 10	1	MTETPIQEEQASIK	MTETPIQEEQASIK	2	MTETPIQEEQASIK2	6056.01		3761.53
P63031	P63031	MPC1_RAT	Mpc1	Mitochondrial pyruvate carrier 1	1	MTFALCCYSLTFMR	MTFALC(UniMod:4)C(UniMod:4)YSLTFMR	2	MTFALC(UniMod:4)C(UniMod:4)YSLTFMR2	8801.2	5596.03	2582.25
P07867	P07867	LIPC_RAT	Lipc	Hepatic triacylglycerol lipase	1	MTFCPDNVDDLQLHPTQEK	MTFC(UniMod:4)PDNVDDLQLHPTQEK	3	MTFC(UniMod:4)PDNVDDLQLHPTQEK3	198296	209636	228652
D3Z955	D3Z955	D3Z955_RAT	Pgm2l1	Phosphoglucomutase 2-like 1	1	MTFGTAGLR	MTFGTAGLR	2	MTFGTAGLR2	9227.84	9268.19	
Q62656	Q62656	PTPRZ_RAT	Ptprz1	Receptor-type tyrosine-protein phosphatase zeta	1	MTFHWGK	MTFHWGK	2	MTFHWGK2	8037.11	9841.14	4195.94
F1LRL4	F1LRL4;A0A8I5ZNC8	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	0	MTFLFANLK	MTFLFANLK	2	MTFLFANLK2	52882.6	70385.7	56453.9
A0A8I6GMM8	A0A8I6GMM8	A0A8I6GMM8_RAT	Nipal3	NIPA-like domain containing 3	1	MTGENIAR	MTGENIAR	2	MTGENIAR2	52623.3	60107.8	48800.7
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	MTGESECLNPSAQSR	MTGESEC(UniMod:4)LNPSAQSR	2	MTGESEC(UniMod:4)LNPSAQSR2	93433.2	93170.9	97941.9
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	MTGESECLNPSAQSR	MTGESEC(UniMod:4)LNPSAQSR	3	MTGESEC(UniMod:4)LNPSAQSR3	5402.03	6797.17	7233.9
Q0D2L2	Q0D2L2	Q0D2L2_RAT	Mrps22	Mitochondrial ribosomal protein S22	1	MTGLDLQK	MTGLDLQK	2	MTGLDLQK2	12190.5	15041.9	
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	MTGLVDEAIDTK	MTGLVDEAIDTK	2	MTGLVDEAIDTK2	750815	736356	759694
O89035	O89035	DIC_RAT	Slc25a10	Mitochondrial dicarboxylate carrier	1	MTGMALQVVR	MTGMALQVVR	2	MTGMALQVVR2	15234.8	25801.3	23957.8
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	MTGQIYVSGLLDR	MTGQIYVSGLLDR	2	MTGQIYVSGLLDR2	4695.83	10042	4143.64
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	MTGSEFDFEEMK	MTGSEFDFEEMK	2	MTGSEFDFEEMK2	14544.4	13193	13315.9
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	MTGSEFDFEEMKR	MTGSEFDFEEMKR	3	MTGSEFDFEEMKR3	26065.3	37473.5	35962.4
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	MTGVPAEETDSR	MTGVPAEETDSR	2	MTGVPAEETDSR2	352780	314892	330208
D3ZW15	D3ZW15	D3ZW15_RAT	Sec24b	SEC24 homolog B, COPII coat complex component	1	MTHLPELDTLPSER	MTHLPELDTLPSER	3	MTHLPELDTLPSER3	20543.2	25433.7	21947.2
D3ZH14	D3ZH14	D3ZH14_RAT	Tmcc1	Transmembrane and coiled-coil domain family 1	1	MTHNALENINVIGQGLK	MTHNALENINVIGQGLK	3	MTHNALENINVIGQGLK3	1814.57	1880.84	2913.62
Q4QQW4	Q4QQW4;D3ZVU7;F7ENH8	HDAC1_RAT	Hdac1	Histone deacetylase 1	0	MTHNLLLNYGLYR	MTHNLLLNYGLYR	3	MTHNLLLNYGLYR3	2983.28	6693.72	6786.92
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	MTICGVLEQSTSPALK	MTIC(UniMod:4)GVLEQSTSPALK	2	MTIC(UniMod:4)GVLEQSTSPALK2	53853.8	50123.7	54120.5
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	MTICGVLEQSTSPALK	MTIC(UniMod:4)GVLEQSTSPALK	3	MTIC(UniMod:4)GVLEQSTSPALK3	33707.2	30523.8	34003.5
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	MTILAHDWAALR	MTILAHDWAALR	3	MTILAHDWAALR3	14775.2	10061.4	6366.43
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	MTIQDSLQHPWIKPK	MTIQDSLQHPWIKPK	3	MTIQDSLQHPWIKPK3	10184.6	3910.66	
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	MTIQDSLQHPWIKPK	MTIQDSLQHPWIKPK	4	MTIQDSLQHPWIKPK4	2970.15	4453.08	5121.85
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	MTISNMEADMNR	MTISNMEADMNR	2	MTISNMEADMNR2	22486.7	17549.5	18384.1
O88321	O88321	O88321_RAT	Psmd4	26S proteasome non-ATPase regulatory subunit 4	1	MTISQQEFGR	MTISQQEFGR	2	MTISQQEFGR2	203680	201543	196618
Q80ZF4	Q80ZF4	Q80ZF4_RAT	Mapkapk2	non-specific serine/threonine protein kinase	1	MTITEFMNHPWIMQSTK	MTITEFMNHPWIMQSTK	3	MTITEFMNHPWIMQSTK3	18429.7	20840.5	15740.1
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	MTLADDVTLDDLIMAK	MTLADDVTLDDLIMAK	2	MTLADDVTLDDLIMAK2	14866.3	8269.37	14611.7
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	MTLADIER	MTLADIER	2	MTLADIER2	277298	287637	295464
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	MTLDTLSIYETPSMGLLDK	MTLDTLSIYETPSMGLLDK	3	MTLDTLSIYETPSMGLLDK3	11789.1	10750.7	11342.1
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	MTLDTLSIYETPSMGLLDKK	MTLDTLSIYETPSMGLLDKK	3	MTLDTLSIYETPSMGLLDKK3	52417.2	46757.1	42369.1
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	MTLEELLGEIR	MTLEELLGEIR	2	MTLEELLGEIR2	7215.44		
Q9Z1P2	Q9QXQ0;Q8R4I6;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	MTLGMIWTIILR	MTLGMIWTIILR	2	MTLGMIWTIILR2			7650.47
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	MTLLHFLAELCETDHPDVLK	MTLLHFLAELC(UniMod:4)ETDHPDVLK	3	MTLLHFLAELC(UniMod:4)ETDHPDVLK3	7562.42	4296.28	3198.63
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	MTLLHFLAELCETDHPDVLK	MTLLHFLAELC(UniMod:4)ETDHPDVLK	4	MTLLHFLAELC(UniMod:4)ETDHPDVLK4	6283.39		6089.42
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	MTLLHFLAELCETDHPDVLKFPDELAHVEK	MTLLHFLAELC(UniMod:4)ETDHPDVLKFPDELAHVEK	4	MTLLHFLAELC(UniMod:4)ETDHPDVLKFPDELAHVEK4	7007.31	7130.95	11831
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	MTLVASEDYGDTLAAIQGLLK	MTLVASEDYGDTLAAIQGLLK	3	MTLVASEDYGDTLAAIQGLLK3	40239	37752.1	40653.8
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	MTLVASEDYGDTLAAIQGLLKK	MTLVASEDYGDTLAAIQGLLKK	3	MTLVASEDYGDTLAAIQGLLKK3	16592.9	23658.2	33928.5
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	MTMQSEETHAMK	MTMQSEETHAMK	3	MTMQSEETHAMK3	5686.08	4380.71	2698.77
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	MTMSSLVER	MTMSSLVER	2	MTMSSLVER2	13625.2	10088.2	10417.4
A0A8I6GE00	A0A8I6GFX3;A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	0	MTNFIMK	MTNFIMK	2	MTNFIMK2	17311.9	26355.4	16791
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	MTNGETSSYWQSDGSAR	MTNGETSSYWQSDGSAR	2	MTNGETSSYWQSDGSAR2	7135.07	9851.55	4413.88
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	MTNGFSGADLTEICQR	MTNGFSGADLTEIC(UniMod:4)QR	2	MTNGFSGADLTEIC(UniMod:4)QR2	50197.5	42279.3	39371.8
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	MTNGFSGADLTEICQR	MTNGFSGADLTEIC(UniMod:4)QR	3	MTNGFSGADLTEIC(UniMod:4)QR3	49101.8	42471.2	52055.8
Q9WTT7	Q9WTT7	5MP1_RAT	Bzw2	eIF5-mimic protein 1	1	MTNHCVFSANEDHETIR	MTNHC(UniMod:4)VFSANEDHETIR	4	MTNHC(UniMod:4)VFSANEDHETIR4	27663.3	30000.1	32741.3
Q498T9	Q498T9	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	1	MTNLTELELVHCDLER	MTNLTELELVHC(UniMod:4)DLER	3	MTNLTELELVHC(UniMod:4)DLER3	8241	5465.43	2943.66
A0A0G2JXI6	A0A0G2JXI6	A0A0G2JXI6_RAT	Cyrib	CYFIP related Rac1 interactor B	1	MTNPAIQNDFSYYR	MTNPAIQNDFSYYR	2	MTNPAIQNDFSYYR2	26020.6	11050.7	14526.7
Q4V8E2	Q4V8E2	Q4V8E2_RAT	Psmd14	Proteasome 26S subunit, non-ATPase 14	1	MTPEQLAIK	MTPEQLAIK	2	MTPEQLAIK2	394364	365003	408466
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	MTPGNLGIVFGPTLLR	MTPGNLGIVFGPTLLR	2	MTPGNLGIVFGPTLLR2	58078.2	67431.8	56040.2
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	MTPGNLGIVFGPTLLR	MTPGNLGIVFGPTLLR	3	MTPGNLGIVFGPTLLR3	15928.5	11945.4	12996.9
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	MTPGNLGIVFGPTLLRPR	MTPGNLGIVFGPTLLRPR	3	MTPGNLGIVFGPTLLRPR3	1.26947e+06	1.37033e+06	1.29957e+06
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	MTPGNLGIVFGPTLLRPR	MTPGNLGIVFGPTLLRPR	4	MTPGNLGIVFGPTLLRPR4	11448.3	14818.7	8169.6
A0A0G2K543	A0A0G2K543	A0A0G2K543_RAT	C2cd5	C2 calcium-dependent domain containing 5	1	MTPLSFIPGAK	MTPLSFIPGAK	2	MTPLSFIPGAK2	30796.5	32225.7	26053.4
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	MTPNDIR	MTPNDIR	2	MTPNDIR2	174307	184573	207436
D3ZCD0	D3ZCD0	D3ZCD0_RAT	Tek	receptor protein-tyrosine kinase	1	MTPQIEDLPDHIEVNSGK	MTPQIEDLPDHIEVNSGK	3	MTPQIEDLPDHIEVNSGK3	12084	6631.69	17156.7
Q0H8B9	Q0H8B9	CL2DB_RAT	Clec2d11	C-type lectin domain family 2 member D11	1	MTPQISTINTYAACPR	MTPQISTINTYAAC(UniMod:4)PR	2	MTPQISTINTYAAC(UniMod:4)PR2	21187	21950.5	16442.3
Q0H8B9	Q0H8B9	CL2DB_RAT	Clec2d11	C-type lectin domain family 2 member D11	1	MTPQISTINTYAACPR	MTPQISTINTYAAC(UniMod:4)PR	3	MTPQISTINTYAAC(UniMod:4)PR3	4520.95	13347.8	16645.8
Q99N37	Q99N37	RHG17_RAT	Arhgap17	Rho GTPase-activating protein 17	1	MTPSNIAIVLGPNLLWAK	MTPSNIAIVLGPNLLWAK	2	MTPSNIAIVLGPNLLWAK2	1013.23	764.21	750.036
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	MTQDLQNK	MTQDLQNK	2	MTQDLQNK2	49940	45705.9	
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	MTQFFGHNFEEER	MTQFFGHNFEEER	3	MTQFFGHNFEEER3	16977.2	12648.9	7481.2
P16232	P16232	DHI1_RAT	Hsd11b1	11-beta-hydroxysteroid dehydrogenase 1	1	MTQPLIASYSASK	MTQPLIASYSASK	2	MTQPLIASYSASK2	18111.4	13037.4	26177.5
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	MTQQQENPK	MTQQQENPK	2	MTQQQENPK2			59260.7
A0A8I6ASA2	A0A8I6ASA2	A0A8I6ASA2_RAT	ENSRNOG00000063876	Ig-like domain-containing protein	1	MTQSPSSLSASLGER	MTQSPSSLSASLGER	2	MTQSPSSLSASLGER2	10231	10278.5	9278.64
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	MTSDPDEYLLR	MTSDPDEYLLR	2	MTSDPDEYLLR2	25533.1	30223.7	25200.9
D4AD37	D4AD37	IMPA3_RAT	Bpnt2	Golgi-resident adenosine 3',5'-bisphosphate 3'-phosphatase	1	MTSGDVLSNR	MTSGDVLSNR	2	MTSGDVLSNR2	44883.1	31258.7	32378.2
D4AD37	D4AD37	IMPA3_RAT	Bpnt2	Golgi-resident adenosine 3',5'-bisphosphate 3'-phosphatase	1	MTSGDVLSNRK	MTSGDVLSNRK	3	MTSGDVLSNRK3	73688.1	71250.7	84839.7
A0A0G2K6R0	A0A0G2K6R0	A0A0G2K6R0_RAT	Tnrc6b	Trinucleotide repeat containing adaptor 6B	1	MTSGVSQGEWK	MTSGVSQGEWK	2	MTSGVSQGEWK2	6050.81	5630.25	9169.96
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	MTSHPTLPYYLTGAQDGSVR	MTSHPTLPYYLTGAQDGSVR	3	MTSHPTLPYYLTGAQDGSVR3	12921.8	19360.3	19194.7
P63144	P63144	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	1	MTSHVVNEIDNILR	MTSHVVNEIDNILR	2	MTSHVVNEIDNILR2	12167.8	17782.4	15863.5
P63144	P63144	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	1	MTSHVVNEIDNILR	MTSHVVNEIDNILR	3	MTSHVVNEIDNILR3	225067	266164	247650
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	MTSIPKEELPHCPAGPK	MTSIPKEELPHC(UniMod:4)PAGPK	4	MTSIPKEELPHC(UniMod:4)PAGPK4	3471.21	7204.58	10757.4
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	MTSLNLATIFGPNLLHK	MTSLNLATIFGPNLLHK	2	MTSLNLATIFGPNLLHK2	5429.36	7769.85	13358.2
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	MTSLNLATIFGPNLLHK	MTSLNLATIFGPNLLHK	3	MTSLNLATIFGPNLLHK3	79131.6	61797.1	111449
A0A8I5ZTW6	A0A8I5ZTW6	A0A8I5ZTW6_RAT	Gopc	Golgi associated PDZ and coiled-coil motif containing	1	MTSLSSCFAQLCHK	MTSLSSC(UniMod:4)FAQLC(UniMod:4)HK	3	MTSLSSC(UniMod:4)FAQLC(UniMod:4)HK3	10446.1	18576.4	12260
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	MTSPLEK	MTSPLEK	2	MTSPLEK2	57327.3	60599.1	56133.6
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	MTSSDKDFR	MTSSDKDFR	2	MTSSDKDFR2	61442.4	77124.1	53613.6
A0A0U1RRP3	A0A0U1RRP3	A0A0U1RRP3_RAT	Upf3b	UPF3B, regulator of nonsense mediated mRNA decay	1	MTSTPETLLEEIEAK	MTSTPETLLEEIEAK	2	MTSTPETLLEEIEAK2	8584.41	6811.46	13565.8
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	MTSVGLSDIVMDTTVTYTTIHGR	MTSVGLSDIVMDTTVTYTTIHGR	3	MTSVGLSDIVMDTTVTYTTIHGR3	25079	11694.6	23420.9
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	MTSVIAYVYK	MTSVIAYVYK	2	MTSVIAYVYK2	10452.4	17899	21797
O08628	O08628	PCOC1_RAT	Pcolce	Procollagen C-endopeptidase enhancer 1	1	MTTDEGTGGR	MTTDEGTGGR	2	MTTDEGTGGR2			22347.9
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	MTTLFCINVLSEVCGQDITTK	MTTLFC(UniMod:4)INVLSEVC(UniMod:4)GQDITTK	3	MTTLFC(UniMod:4)INVLSEVC(UniMod:4)GQDITTK3	11050.5	7314.83	12518.8
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	MTTQGEELR	MTTQGEELR	2	MTTQGEELR2	13719.6	9724.32	15277.9
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	MTVAHMWFDNQIHEADTTENQSGVSFDK	MTVAHMWFDNQIHEADTTENQSGVSFDK	4	MTVAHMWFDNQIHEADTTENQSGVSFDK4	10043	23066.1	16312.5
Q4KSH7	Q4KSH7	MP2K7_RAT	Map2k7	Dual specificity mitogen-activated protein kinase kinase 7	1	MTVAIVK	MTVAIVK	2	MTVAIVK2	8524.09	11728.7	
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	MTVDESGQLVSCSMDDTVR	MTVDESGQLVSC(UniMod:4)SMDDTVR	3	MTVDESGQLVSC(UniMod:4)SMDDTVR3	105789	121183	117719
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	MTVPGLEDLPQHGLPR	MTVPGLEDLPQHGLPR	3	MTVPGLEDLPQHGLPR3	92217.2	99752.6	93492.7
P46844	P46844	BIEA_RAT	Blvra	Biliverdin reductase A	1	MTVQLETQNK	MTVQLETQNK	2	MTVQLETQNK2		4366.68	4800.92
P55146	P55146	TYRO3_RAT	Tyro3	Tyrosine-protein kinase receptor TYRO3	1	MTVSQGQPVK	MTVSQGQPVK	2	MTVSQGQPVK2	18152.1	15015.1	17414
Q64542	Q64542	AT2B4_RAT	Atp2b4	Plasma membrane calcium-transporting ATPase 4	1	MTVVQAYIGGTHYR	MTVVQAYIGGTHYR	3	MTVVQAYIGGTHYR3	5036.54	10779.9	3549.45
P11505	P11505	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	1	MTVVQAYINEK	MTVVQAYINEK	2	MTVVQAYINEK2	9891.51	11914	8703.36
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	MTWHVPCFTCAACK	MTWHVPC(UniMod:4)FTC(UniMod:4)AAC(UniMod:4)K	2	MTWHVPC(UniMod:4)FTC(UniMod:4)AAC(UniMod:4)K2	41557.6	34868	41982.8
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	MTWHVPCFTCAACK	MTWHVPC(UniMod:4)FTC(UniMod:4)AAC(UniMod:4)K	3	MTWHVPC(UniMod:4)FTC(UniMod:4)AAC(UniMod:4)K3	52098.9	62618	59888.3
A0A8I6A6H8	A0A8I6A6H8	A0A8I6A6H8_RAT	Serpinb6a	Serpin family B member 6A	1	MTYIGEIFTK	MTYIGEIFTK	2	MTYIGEIFTK2	112438	113964	122986
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	MVAAATNNLCEAANAAVQGHASQEK	MVAAATNNLC(UniMod:4)EAANAAVQGHASQEK	3	MVAAATNNLC(UniMod:4)EAANAAVQGHASQEK3	1.39846e+06	1.26223e+06	1.25145e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	MVAAATNNLCEAANAAVQGHASQEK	MVAAATNNLC(UniMod:4)EAANAAVQGHASQEK	4	MVAAATNNLC(UniMod:4)EAANAAVQGHASQEK4	71238	74506.3	52074
Q5XIT9	Q5XIT9	MCCB_RAT	Mccc2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	1	MVAAVSCAK	MVAAVSC(UniMod:4)AK	2	MVAAVSC(UniMod:4)AK2	61843	58094	50188
P51111	P51111	HD_RAT	Htt	Huntingtin	1	MVADECLNK	MVADEC(UniMod:4)LNK	2	MVADEC(UniMod:4)LNK2	49623.8	50289.5	38386.4
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	MVADHLQFLHSECHSIIR	MVADHLQFLHSEC(UniMod:4)HSIIR	4	MVADHLQFLHSEC(UniMod:4)HSIIR4	7261.78	4932.76	6537.64
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	MVADMCR	MVADMC(UniMod:4)R	2	MVADMC(UniMod:4)R2	17450.5	26771.9	16668.7
Q29RW1	Q29RW1	MYH4_RAT	Myh4	Myosin-4	1	MVALMQEK	MVALMQEK	2	MVALMQEK2	24404.4	16705.2	22348.5
P06757	P06757	ADH1_RAT	Adh1	Alcohol dehydrogenase 1	1	MVATGVCR	MVATGVC(UniMod:4)R	2	MVATGVC(UniMod:4)R2	6956.6	6427.65	7597.15
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	MVATPQMTASTILDGVNVGR	MVATPQMTASTILDGVNVGR	3	MVATPQMTASTILDGVNVGR3		15724.7	19554.3
Q6TUD4	Q6TUD4	YIPF3_RAT	Yipf3	Protein YIPF3	1	MVAVLVSR	MVAVLVSR	2	MVAVLVSR2	15878.9	12902.2	16510.9
A0A8I5ZS67	A0A8I5ZS67	A0A8I5ZS67_RAT	Gigyf2	GRB10 interacting GYF protein 2	1	MVAYLQDSALDDER	MVAYLQDSALDDER	2	MVAYLQDSALDDER2	6522.09	3230.97	4233.94
D3ZM09	D3ZM09	D3ZM09_RAT	Sars2	serine--tRNA ligase	1	MVCASTCYR	MVC(UniMod:4)ASTC(UniMod:4)YR	2	MVC(UniMod:4)ASTC(UniMod:4)YR2	5846.85	3117.93	4378.86
A0A8I6AE33	A0A8I6AE33	A0A8I6AE33_RAT	Wdr37	WD repeat domain 37	1	MVCCSAWSEDHPICNLFTCGFDR	MVC(UniMod:4)C(UniMod:4)SAWSEDHPIC(UniMod:4)NLFTC(UniMod:4)GFDR	3	MVC(UniMod:4)C(UniMod:4)SAWSEDHPIC(UniMod:4)NLFTC(UniMod:4)GFDR3	17897.1	16802.3	10744.4
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	MVCSDSPFAGALR	MVC(UniMod:4)SDSPFAGALR	2	MVC(UniMod:4)SDSPFAGALR2	3003.56	2239.08	4655.89
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	MVCSQQYR	MVC(UniMod:4)SQQYR	2	MVC(UniMod:4)SQQYR2	194557	207268	211136
A0A0G2JZH8	A0A0G2JZH8	A0A0G2JZH8_RAT	Pdhx	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	MVDDELATK	MVDDELATK	2	MVDDELATK2	24723.4	26636	37287.8
A0A0G2JUH8	A0A0G2JUH8	A0A0G2JUH8_RAT	Snx13	Sorting nexin 13	1	MVDDFGTHLR	MVDDFGTHLR	3	MVDDFGTHLR3	4096.56	5553.48	8849.3
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	MVDEMNVNAQR	MVDEMNVNAQR	2	MVDEMNVNAQR2	1.10964e+06	1.33181e+06	1.11366e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	MVDEMNVNAQR	MVDEMNVNAQR	3	MVDEMNVNAQR3	8233.53	13695.9	6086.55
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	MVDGVGVCTVCAK	MVDGVGVC(UniMod:4)TVC(UniMod:4)AK	2	MVDGVGVC(UniMod:4)TVC(UniMod:4)AK2	18767.6	16451.7	13742.9
M0R5F1	M0R5F1	M0R5F1_RAT	Aspn	Asporin	1	MVDLQNNK	MVDLQNNK	2	MVDLQNNK2	325128	354777	372868
P61983	P61983	1433G_RAT	Ywhag	14-3-3 protein gamma	1	MVDREQLVQK	MVDREQLVQK	3	MVDREQLVQK3	75041.5	97034.2	85650.9
D3ZZ81	A0A8I6AK94;Q91Z80;Q91Z79;D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	0	MVDSFHR	MVDSFHR	2	MVDSFHR2	12618.9	9161.09	12639.5
P51111	P51111	HD_RAT	Htt	Huntingtin	1	MVDTLACR	MVDTLAC(UniMod:4)R	2	MVDTLAC(UniMod:4)R2	78472.1	91444.5	64702.9
Q6Q7Y5	Q9JID2;Q6Q7Y5;Q63210;P19627;P82471;A0A8J8XRQ3	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	0	MVDVGGQR	MVDVGGQR	2	MVDVGGQR2	1.93676e+06	1.93565e+06	2.28846e+06
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	MVDVIPPSEILK	MVDVIPPSEILK	2	MVDVIPPSEILK2	110294	106257	111183
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	MVDVIPPSEILKDTAPVLEGLK	MVDVIPPSEILKDTAPVLEGLK	3	MVDVIPPSEILKDTAPVLEGLK3	64441.8	66965.4	86014.8
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	MVEEIGVELAVLDLPDLPEDELAHSVQK	MVEEIGVELAVLDLPDLPEDELAHSVQK	4	MVEEIGVELAVLDLPDLPEDELAHSVQK4	12501.6	22363.3	15729.3
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	MVEEILK	MVEEILK	1	MVEEILK1	1.30027e+06	973703	1.04227e+06
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	MVEEILK	MVEEILK	2	MVEEILK2	135338	108152	120553
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	MVEEILKYEALLLTHESSIR	MVEEILKYEALLLTHESSIR	3	MVEEILKYEALLLTHESSIR3	19029.2	4492.47	12895.8
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	MVEEILKYEALLLTHESSIR	MVEEILKYEALLLTHESSIR	4	MVEEILKYEALLLTHESSIR4	8430.97	9300.38	12926.3
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	MVEEILKYEALLLTHESSIRYLQDIYTSNK	MVEEILKYEALLLTHESSIRYLQDIYTSNK	4	MVEEILKYEALLLTHESSIRYLQDIYTSNK4	44717.6	38382.7	40319.8
A0A0G2K0W3	A0A0G2K0W3	A0A0G2K0W3_RAT	Ttyh3	Protein tweety homolog	1	MVEEYSVLSGDILQYYLACSPR	MVEEYSVLSGDILQYYLAC(UniMod:4)SPR	3	MVEEYSVLSGDILQYYLAC(UniMod:4)SPR3	6614.03	6482.76	8250.31
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	MVEGFFDR	MVEGFFDR	2	MVEGFFDR2	440520	434988	476481
Q8K1Q0	A0A8I5ZWZ4;Q8K1Q0	NMT1_RAT	Nmt1	Glycylpeptide N-tetradecanoyltransferase 1	0	MVEINFLCVHK	MVEINFLC(UniMod:4)VHK	3	MVEINFLC(UniMod:4)VHK3	5842.36	3608.42	4607.3
Q5XIJ6	Q5XIJ6	BABA1_RAT	Babam1	BRISC and BRCA1-A complex member 1	1	MVEMFVR	MVEMFVR	2	MVEMFVR2	124881	152708	124697
D3ZWS0	D3ZWS0	D3ZWS0_RAT	Scrib	Scribble planar cell polarity protein	1	MVEPENAVTITPLRPEDDYSPR	MVEPENAVTITPLRPEDDYSPR	3	MVEPENAVTITPLRPEDDYSPR3	7764.98	7826.9	8470.73
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	MVESAVIFR	MVESAVIFR	2	MVESAVIFR2	13428.4	8653.81	11427
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	MVESVFR	MVESVFR	2	MVESVFR2	1.16862e+06	1.26898e+06	1.12466e+06
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	MVEVDPEAPTEEEK	MVEVDPEAPTEEEK	2	MVEVDPEAPTEEEK2	51475.4	48619.3	51163.4
A1L1J8	A1L1J8	A1L1J8_RAT	Rab5b	RAB5B, member RAS oncogene family	1	MVEYEEAQAYADDNSLLFMETSAK	MVEYEEAQAYADDNSLLFMETSAK	3	MVEYEEAQAYADDNSLLFMETSAK3		3001.21	
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	MVFINNIALAQMK	MVFINNIALAQMK	2	MVFINNIALAQMK2	12494.7	16620	10811.8
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	MVFQENSR	MVFQENSR	2	MVFQENSR2	317464	299431	334988
P16636	P16636	LYOX_RAT	Lox	Protein-lysine 6-oxidase	1	MVGDDPYNPYK	MVGDDPYNPYK	2	MVGDDPYNPYK2		2692.69	8150.49
D4A7R3	D4A7R3	D4A7R3_RAT	Nup205	Nucleoporin 205	1	MVGDFTHDQNVSQK	MVGDFTHDQNVSQK	3	MVGDFTHDQNVSQK3	13255.8	8633.26	10692.5
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	MVGGGLQSAQASVPTEEELSPTEEEQK	MVGGGLQSAQASVPTEEELSPTEEEQK	3	MVGGGLQSAQASVPTEEELSPTEEEQK3	54459.9	51471.3	52084.5
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	MVGGIAQIIAAQEEMLR	MVGGIAQIIAAQEEMLR	2	MVGGIAQIIAAQEEMLR2	149011	153553	145143
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	MVGGIAQIIAAQEEMLR	MVGGIAQIIAAQEEMLR	3	MVGGIAQIIAAQEEMLR3	77053.8	75309.1	84753.6
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	MVGGIAQIIAAQEEMLRK	MVGGIAQIIAAQEEMLRK	2	MVGGIAQIIAAQEEMLRK2	25658.9	32070.8	48055.2
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	MVGGIAQIIAAQEEMLRK	MVGGIAQIIAAQEEMLRK	3	MVGGIAQIIAAQEEMLRK3	963621	1.41945e+06	1.39314e+06
B0BN18	B0BN18	PFD2_RAT	Pfdn2	Prefoldin subunit 2	1	MVGGVLVER	MVGGVLVER	2	MVGGVLVER2	119190	84999.9	103982
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	MVGVPAAFDMMLTGR	MVGVPAAFDMMLTGR	2	MVGVPAAFDMMLTGR2	141856	135902	159500
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	MVGVPAAFDMMLTGR	MVGVPAAFDMMLTGR	3	MVGVPAAFDMMLTGR3	13184.2	13785.9	18200
D3ZXK7	D3ZXK7	RN123_RAT	Rnf123	E3 ubiquitin-protein ligase RNF123	1	MVGVSDDVNEYAMALR	MVGVSDDVNEYAMALR	2	MVGVSDDVNEYAMALR2	11250.9	6808.05	5670.56
P11915	P11915	SCP2_RAT	Scp2	Sterol carrier protein 2	1	MVGYDMSK	MVGYDMSK	2	MVGYDMSK2	11339.3	6336.78	6298.15
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	MVHEYANGLLDHR	MVHEYANGLLDHR	2	MVHEYANGLLDHR2	30699.3	41265.2	43680.4
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	MVHEYANGLLDHR	MVHEYANGLLDHR	3	MVHEYANGLLDHR3	461093	434560	468187
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	MVHEYANGLLDHR	MVHEYANGLLDHR	4	MVHEYANGLLDHR4	205121	256199	226058
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	MVHEYANGLLDHRVPQTDMTFR	MVHEYANGLLDHRVPQTDMTFR	4	MVHEYANGLLDHRVPQTDMTFR4	5316.44	10913.5	13562.5
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	MVHFLTHYADK	MVHFLTHYADK	2	MVHFLTHYADK2	10490.7	3113.5	3990.23
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	MVHFLTHYADK	MVHFLTHYADK	3	MVHFLTHYADK3	20246	22971.3	11911.3
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	MVHGNVTPENIILNK	MVHGNVTPENIILNK	2	MVHGNVTPENIILNK2	4582.41	3663.7	
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	MVHGNVTPENIILNK	MVHGNVTPENIILNK	3	MVHGNVTPENIILNK3	26956.9	31743.9	21630.4
Q9Z2X3	Q9Z2X3	PSD10_RAT	Psmd10	26S proteasome non-ATPase regulatory subunit 10	1	MVHILLFYK	MVHILLFYK	3	MVHILLFYK3	10429.4	12146.2	5885.23
A0A8I6ATU9	A0A8I6ATU9	A0A8I6ATU9_RAT	Atxn2	Ataxin 2	1	MVHILTSVVGSK	MVHILTSVVGSK	3	MVHILTSVVGSK3	2213.15	2625.15	3948.58
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	MVHNGIEYGDMQLICEAYHLMK	MVHNGIEYGDMQLIC(UniMod:4)EAYHLMK	4	MVHNGIEYGDMQLIC(UniMod:4)EAYHLMK4	8900.86	9936.86	7325.04
A0A0G2K0H3	A0A0G2K0H3	A0A0G2K0H3_RAT	Lrp6	Low-density lipoprotein receptor-related protein	1	MVIDEQQSPDIILPIHSLR	MVIDEQQSPDIILPIHSLR	3	MVIDEQQSPDIILPIHSLR3	3750.75		3320.37
B5DF93	B5DF93	PATL1_RAT	Patl1	Protein PAT1 homolog 1	1	MVIENELEDPAVMR	MVIENELEDPAVMR	2	MVIENELEDPAVMR2	23158.8	21234.6	11654.1
B5DF93	B5DF93	PATL1_RAT	Patl1	Protein PAT1 homolog 1	1	MVIENELEDPAVMR	MVIENELEDPAVMR	3	MVIENELEDPAVMR3	3612.12	3138.58	7039.15
D3ZKT0	D3ZKT0	TAM41_RAT	Tamm41	Phosphatidate cytidylyltransferase, mitochondrial	1	MVIGEEK	MVIGEEK	2	MVIGEEK2	33599.5	21948.8	14181.6
P47942	P47942	DPYL2_RAT	Dpysl2	Dihydropyrimidinase-related protein 2	1	MVIPGGIDVHTR	MVIPGGIDVHTR	3	MVIPGGIDVHTR3	55961.4	36243.9	36882.7
Q5XI07	Q5XI07	LPP_RAT	Lpp	Lipoma-preferred partner homolog	1	MVIPQQPPLTATK	MVIPQQPPLTATK	2	MVIPQQPPLTATK2	13503.2	16668.2	12556.9
O08774	O08774	RGS12_RAT	Rgs12	Regulator of G-protein signaling 12	1	MVISEGSSHVEPSSSDEEGGLCEGK	MVISEGSSHVEPSSSDEEGGLC(UniMod:4)EGK	3	MVISEGSSHVEPSSSDEEGGLC(UniMod:4)EGK3		1829.88	
A0A0G2K8N6	A0A0G2K8N6	A0A0G2K8N6_RAT	Ankmy2	Ankyrin repeat and MYND domain containing 2	1	MVIYCDQICQK	MVIYC(UniMod:4)DQIC(UniMod:4)QK	2	MVIYC(UniMod:4)DQIC(UniMod:4)QK2	11182.6	8688.43	12068.3
Q68FY0	Q68FY0	QCR1_RAT	Uqcrc1	Cytochrome b-c1 complex subunit 1, mitochondrial	1	MVLAAAGGVK	MVLAAAGGVK	2	MVLAAAGGVK2	398260	280227	317584
P20069	P20069	MPPA_RAT	Pmpca	Mitochondrial-processing peptidase subunit alpha	1	MVLAGVGVEHEHLVECAR	MVLAGVGVEHEHLVEC(UniMod:4)AR	3	MVLAGVGVEHEHLVEC(UniMod:4)AR3	10672.8	9513.33	
P20069	P20069	MPPA_RAT	Pmpca	Mitochondrial-processing peptidase subunit alpha	1	MVLAGVGVEHEHLVECAR	MVLAGVGVEHEHLVEC(UniMod:4)AR	4	MVLAGVGVEHEHLVEC(UniMod:4)AR4	13586.8	11237.9	16503.7
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	MVLDWCYGR	MVLDWC(UniMod:4)YGR	2	MVLDWC(UniMod:4)YGR2	57774.3	59751.7	44856.5
D3ZUN5	D3ZUN5	D3ZUN5_RAT	Pofut2	GDP-fucose protein O-fucosyltransferase 2	1	MVLEEDWTR	MVLEEDWTR	2	MVLEEDWTR2	8801.88	20062.1	10968.6
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	MVLEQER	MVLEQER	2	MVLEQER2	391985	419541	396848
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	MVLGSLVR	MVLGSLVR	2	MVLGSLVR2	1.19781e+06	1.40851e+06	1.3486e+06
P17945	P17945	HGF_RAT	Hgf	Hepatocyte growth factor	1	MVLGVIVPGR	MVLGVIVPGR	2	MVLGVIVPGR2	9902.64	7539.76	4389.51
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	MVLLDLPSIGSQVVR	MVLLDLPSIGSQVVR	2	MVLLDLPSIGSQVVR2	42100.7	41986.4	36982.8
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	MVLLDLPSIGSQVVR	MVLLDLPSIGSQVVR	3	MVLLDLPSIGSQVVR3	4197.38	6345.88	3130.25
O08770	O08770	GPV_RAT	Gp5	Platelet glycoprotein V	1	MVLLEQLFLDHNALR	MVLLEQLFLDHNALR	2	MVLLEQLFLDHNALR2	91279.3	84641.4	50423.4
O08770	O08770	GPV_RAT	Gp5	Platelet glycoprotein V	1	MVLLEQLFLDHNALR	MVLLEQLFLDHNALR	3	MVLLEQLFLDHNALR3	1.98413e+06	2.46976e+06	1.80234e+06
Q5M880	Q5M880	S66A2_RAT	Slc66a2	Solute carrier family 66 member 2	1	MVLMWTSGDTFK	MVLMWTSGDTFK	2	MVLMWTSGDTFK2	5167.57	4906.63	5267.98
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	MVLNETYR	MVLNETYR	2	MVLNETYR2	18112.9	19334.8	15319.7
Q62784	Q62784	INP4A_RAT	Inpp4a	Inositol polyphosphate-4-phosphatase type I A	1	MVLPVDESLTEALGIR	MVLPVDESLTEALGIR	2	MVLPVDESLTEALGIR2	8874.59	7042.42	
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	MVLSGCAIIVR	MVLSGC(UniMod:4)AIIVR	2	MVLSGC(UniMod:4)AIIVR2	50377.2	41800	27891.8
D3ZE20	D3ZE20	D3ZE20_RAT	Nfatc1	Nuclear factor of activated T-cells 1	1	MVLSGHNFLQDSK	MVLSGHNFLQDSK	3	MVLSGHNFLQDSK3	8788.35	8893.56	
G3V7E6	G3V7E6	G3V7E6_RAT	Pcm1	Pericentriolar material 1	1	MVLTLTQQNDESKEFVK	MVLTLTQQNDESKEFVK	3	MVLTLTQQNDESKEFVK3	3795.9	5431.65	
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	MVLTNYMFPQQPR	MVLTNYMFPQQPR	2	MVLTNYMFPQQPR2	545721	550587	595039
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	MVLTNYMFPQQPR	MVLTNYMFPQQPR	3	MVLTNYMFPQQPR3	66053.1	74980.3	79268.1
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	MVLVDLPGVINTVTSGMAPDTK	MVLVDLPGVINTVTSGMAPDTK	3	MVLVDLPGVINTVTSGMAPDTK3	35924.5	37069.7	51131
P09330	P09330;A0A0G2JSV3;M0RBK1;P60892	PRPS2_RAT	Prps2	Ribose-phosphate pyrophosphokinase 2	0	MVLVGDVK	MVLVGDVK	2	MVLVGDVK2	93260.6	76766	72360.3
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	MVLVNTIYFK	MVLVNTIYFK	2	MVLVNTIYFK2	108352	86766.7	82073.3
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	MVLVNYIFFQGLWKKPFPSSR	MVLVNYIFFQGLWKKPFPSSR	4	MVLVNYIFFQGLWKKPFPSSR4	23273.3	10485.9	18789.7
G3V829	G3V829	G3V829_RAT	Fubp3	Far upstream element binding protein 3	1	MVMIQDGPLPTGADKPLR	MVMIQDGPLPTGADKPLR	3	MVMIQDGPLPTGADKPLR3	6799.67		5551.25
Q9QYL8	Q9QYL8	LYPA2_RAT	Lypla2	Acyl-protein thioesterase 2	1	MVMPSWFDLMGLSPDAPEDEAGIKK	MVMPSWFDLMGLSPDAPEDEAGIKK	3	MVMPSWFDLMGLSPDAPEDEAGIKK3		5755.14	
A0A0G2QC04	A0A0G2QC04;Q5XI38	A0A0G2QC04_RAT	Pls1	Plastin 1	0	MVMTVFACLMGK	MVMTVFAC(UniMod:4)LMGK	2	MVMTVFAC(UniMod:4)LMGK2	18701.2	17795.4	11966.9
Q8K4V4	Q8K4V4	SNX27_RAT	Snx27	Sorting nexin-27	1	MVMYLNMLR	MVMYLNMLR	2	MVMYLNMLR2	11401.3	4479.59	12228.8
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	MVNAFLPTMPEDLLVHAK	MVNAFLPTMPEDLLVHAK	3	MVNAFLPTMPEDLLVHAK3	4001.82	10251.5	
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	MVNDAEK	MVNDAEK	1	MVNDAEK1			39140.3
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	MVNDAEK	MVNDAEK	2	MVNDAEK2			351971
Q6TUD4	Q6TUD4	YIPF3_RAT	Yipf3	Protein YIPF3	1	MVNFPQK	MVNFPQK	2	MVNFPQK2	36097.7	40663.6	30547.6
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	MVNHFIAEFK	MVNHFIAEFK	2	MVNHFIAEFK2	119940	88479.9	82253.8
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	MVNHFIAEFK	MVNHFIAEFK	3	MVNHFIAEFK3	1.41071e+06	1.48732e+06	1.51918e+06
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	MVNHFIAEFKR	MVNHFIAEFKR	3	MVNHFIAEFKR3	10621.3	12040.9	11362.8
Q3B7V5	Q3B7V5	Q3B7V5_RAT	Rab2b	RAB2B, member RAS oncogene family	1	MVNIDGK	MVNIDGK	2	MVNIDGK2	41913.6	35481.5	24331.1
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	MVNLSGCMDPK	MVNLSGC(UniMod:4)MDPK	2	MVNLSGC(UniMod:4)MDPK2	14123.5	27021.8	14840.2
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	MVNLSVPDTIDER	MVNLSVPDTIDER	2	MVNLSVPDTIDER2	144198	142874	121836
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	MVNLSVPDTIDER	MVNLSVPDTIDER	3	MVNLSVPDTIDER3		2144.77	2927.62
Q4V8I7	Q4V8I7	LRC8A_RAT	Lrrc8a	Volume-regulated anion channel subunit LRRC8A	1	MVNLTELELIR	MVNLTELELIR	2	MVNLTELELIR2	4124.66	17900.5	17196.1
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	MVNPTTVLESPHSLPAK	MVNPTTVLESPHSLPAK	3	MVNPTTVLESPHSLPAK3	23236.4	17434.7	20334.2
A0A8I5ZZZ6	A0A8I5ZZZ6	A0A8I5ZZZ6_RAT	Riok3	Serine/threonine-protein kinase RIO3	1	MVNSGMLETITGCISTGK	MVNSGMLETITGC(UniMod:4)ISTGK	2	MVNSGMLETITGC(UniMod:4)ISTGK2	22163.6	1466.21	1840.55
A0A8I5ZZZ6	A0A8I5ZZZ6	A0A8I5ZZZ6_RAT	Riok3	Serine/threonine-protein kinase RIO3	1	MVNSGMLETITGCISTGK	MVNSGMLETITGC(UniMod:4)ISTGK	3	MVNSGMLETITGC(UniMod:4)ISTGK3	9014.95	12166.9	9322.43
D4A5G8	D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	MVNSNLASVEELK	MVNSNLASVEELK	2	MVNSNLASVEELK2	9552.19	6726.65	6584.46
D4A5G8	D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	MVNSNLASVEELKEIDVEVR	MVNSNLASVEELKEIDVEVR	3	MVNSNLASVEELKEIDVEVR3	51612.5	52612.4	24775.9
D4A5G8	D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	MVNSNLASVEELKEIDVEVRK	MVNSNLASVEELKEIDVEVRK	3	MVNSNLASVEELKEIDVEVRK3	8982.08	12368.5	5069.57
D4A5G8	D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	MVNSNLASVEELKEIDVEVRK	MVNSNLASVEELKEIDVEVRK	4	MVNSNLASVEELKEIDVEVRK4	21115.3	16122.4	18642.9
B0K034	B0K034	B0K034_RAT	Dtd2	D-aminoacyl-tRNA deacylase	1	MVNTLLNVK	MVNTLLNVK	2	MVNTLLNVK2	7608.65	3307.74	5770.86
A0A8I6AS17	A0A8I6AS17	A0A8I6AS17_RAT	Bsdc1	BSD domain containing 1	1	MVPAAVSHSEFWHR	MVPAAVSHSEFWHR	3	MVPAAVSHSEFWHR3	27424.5	19877.1	13243.7
A0A8I6AS17	A0A8I6AS17	A0A8I6AS17_RAT	Bsdc1	BSD domain containing 1	1	MVPAAVSHSEFWHR	MVPAAVSHSEFWHR	4	MVPAAVSHSEFWHR4	33634.2	41123.6	32381.2
P08650	P08650	CO5_RAT	C5	Complement C5	1	MVPDAEVYIFFGLR	MVPDAEVYIFFGLR	2	MVPDAEVYIFFGLR2	15273.1	6996.42	6917.06
P08650	P08650	CO5_RAT	C5	Complement C5	1	MVPDAEVYIFFGLR	MVPDAEVYIFFGLR	3	MVPDAEVYIFFGLR3	6928.44	7188.2	4207.08
P08650	P08650	CO5_RAT	C5	Complement C5	1	MVPDAEVYIFFGLREDIKEDEK	MVPDAEVYIFFGLREDIKEDEK	4	MVPDAEVYIFFGLREDIKEDEK4	94326.8	106097	100002
Q5BJS0	Q5BJS0	DHX30_RAT	Dhx30	ATP-dependent RNA helicase DHX30	1	MVPFQVPEILR	MVPFQVPEILR	2	MVPFQVPEILR2	2447.5		
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	MVPIIPGGNSIPLTFSNR	MVPIIPGGNSIPLTFSNR	2	MVPIIPGGNSIPLTFSNR2	7552.07	8016	
P29419	P29419	ATP5I_RAT	Atp5me	ATP synthase subunit e, mitochondrial	1	MVPPVQVSPLIK	MVPPVQVSPLIK	2	MVPPVQVSPLIK2	100632	90891.3	91525.5
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	MVPSFCSDADDIDCR	MVPSFC(UniMod:4)SDADDIDC(UniMod:4)R	2	MVPSFC(UniMod:4)SDADDIDC(UniMod:4)R2	61384.5	46428.2	57647.4
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	MVPSFCSDADDIDCRLEDLTK	MVPSFC(UniMod:4)SDADDIDC(UniMod:4)RLEDLTK	3	MVPSFC(UniMod:4)SDADDIDC(UniMod:4)RLEDLTK3	20739.7	17561	15289.9
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	MVPVSVQQSLAVFSQR	MVPVSVQQSLAVFSQR	2	MVPVSVQQSLAVFSQR2	23140	16324.1	15460.9
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	MVPVSVQQSLAVFSQR	MVPVSVQQSLAVFSQR	3	MVPVSVQQSLAVFSQR3	21357.6	29556.2	13668.2
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	MVQDCLLEEAVQQR	MVQDC(UniMod:4)LLEEAVQQR	2	MVQDC(UniMod:4)LLEEAVQQR2	33203.8	35628.3	31407.8
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	MVQDCLLEEAVQQR	MVQDC(UniMod:4)LLEEAVQQR	3	MVQDC(UniMod:4)LLEEAVQQR3	90165.5	95088.1	85846.8
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	MVQEAEK	MVQEAEK	1	MVQEAEK1			19564.6
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	MVQEAEK	MVQEAEK	2	MVQEAEK2			420344
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	MVQEAEKYK	MVQEAEKYK	2	MVQEAEKYK2	13188.7	14560.6	17125.7
P14659	P0DMW0;P0DMW1;P55063;P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	0	MVQEAER	MVQEAER	2	MVQEAER2	68452.4		46818.8
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	MVQLEGSK	MVQLEGSK	2	MVQLEGSK2	98084	111162	107090
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	MVQLNEEK	MVQLNEEK	2	MVQLNEEK2	44809.9	45062.2	48296.6
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	MVQLSVLVPPSFK	MVQLSVLVPPSFK	2	MVQLSVLVPPSFK2	15320.3	8180.62	10323
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	MVQQCCTYVEEITDLPVK	MVQQC(UniMod:4)C(UniMod:4)TYVEEITDLPVK	3	MVQQC(UniMod:4)C(UniMod:4)TYVEEITDLPVK3	5907.36	13224.5	10777.4
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	MVQQLGK	MVQQLGK	2	MVQQLGK2	44269.3	55923.2	50560.9
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	MVQSHPLLAQAK	MVQSHPLLAQAK	3	MVQSHPLLAQAK3	27596	21097	28115.5
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	MVQSHPLLAQAKPVGK	MVQSHPLLAQAKPVGK	3	MVQSHPLLAQAKPVGK3	2594.76	4969.19	2964.15
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	MVQSHPLLAQAKPVGK	MVQSHPLLAQAKPVGK	4	MVQSHPLLAQAKPVGK4	16807.9	13371	22196.1
G3V6G1	G3V6G1	G3V6G1_RAT	Jchain	Joining chain of multimeric IgA and IgM	1	MVQTALTPDSCYPD	MVQTALTPDSC(UniMod:4)YPD	2	MVQTALTPDSC(UniMod:4)YPD2	1.29033e+06	1.20922e+06	1.23499e+06
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	MVQVASR	MVQVASR	2	MVQVASR2	199339	185193	188088
A0A8I5ZXB9	A0A8I5ZXB9	A0A8I5ZXB9_RAT	Kifap3	Kinesin-associated protein 3	1	MVQVGLLPK	MVQVGLLPK	2	MVQVGLLPK2	45481.1	48233.8	37647
D3ZKX1	D3ZKX1	D3ZKX1_RAT	Washc3	WASH complex subunit 3	1	MVQVGVPVMAIR	MVQVGVPVMAIR	2	MVQVGVPVMAIR2	24043.8	18797.2	24687.5
B5DFC3	B5DFC3	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	1	MVQVHELGCEGISK	MVQVHELGC(UniMod:4)EGISK	3	MVQVHELGC(UniMod:4)EGISK3	20632.5	20108	8803.75
D3ZCT7	D3ZCT7	D3ZCT7_RAT	Sec23b	Protein transport protein SEC23	1	MVQVHELSCEGISK	MVQVHELSC(UniMod:4)EGISK	3	MVQVHELSC(UniMod:4)EGISK3	3973.16	9556.62	4013.76
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	MVRPNQDGTLIASCSNDQTVR	MVRPNQDGTLIASC(UniMod:4)SNDQTVR	3	MVRPNQDGTLIASC(UniMod:4)SNDQTVR3	39265	44968.1	26503.3
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	MVSADAYK	MVSADAYK	2	MVSADAYK2	216939	187680	200646
A0A8I5ZMG6	A0A8I5ZMG6	A0A8I5ZMG6_RAT	Ppp2r5e	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	MVSCNIFR	MVSC(UniMod:4)NIFR	2	MVSC(UniMod:4)NIFR2	49231.1	48493	43529.2
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	MVSDINNAWGCLEQAEK	MVSDINNAWGC(UniMod:4)LEQAEK	3	MVSDINNAWGC(UniMod:4)LEQAEK3	1.23738e+06	1.48658e+06	1.50195e+06
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	MVSDINNGWQHLEQAEK	MVSDINNGWQHLEQAEK	3	MVSDINNGWQHLEQAEK3	150078	120136	154307
Q9QYV0	Q9QYV0	ADA15_RAT	Adam15	Disintegrin and metalloproteinase domain-containing protein 15	1	MVSEGHSLENCCYR	MVSEGHSLENC(UniMod:4)C(UniMod:4)YR	3	MVSEGHSLENC(UniMod:4)C(UniMod:4)YR3	9926.12	9248.28	9857.6
D3ZES7	D3ZPX4;A0A8I6AGW9;D3ZWP6;D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	0	MVSEIYLTR	MVSEIYLTR	2	MVSEIYLTR2	86933.3	69188.8	86829.1
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	MVSESPQMNEFETLTAK	MVSESPQMNEFETLTAK	2	MVSESPQMNEFETLTAK2	13104.2	11151.1	14006.7
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	MVSGFIPLKPTVK	MVSGFIPLKPTVK	3	MVSGFIPLKPTVK3	35850.4	34730.3	25545.3
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	MVSGFIPVK	MVSGFIPVK	2	MVSGFIPVK2	75276.7	49083.8	66802.6
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	MVSGFIPVKPSVK	MVSGFIPVKPSVK	2	MVSGFIPVKPSVK2	1.20302e+06	935274	815309
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	MVSGFIPVKPSVK	MVSGFIPVKPSVK	3	MVSGFIPVKPSVK3	1.52747e+07	1.31409e+07	1.37873e+07
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	MVSGMYMGELVR	MVSGMYMGELVR	2	MVSGMYMGELVR2	356200	345174	307600
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	MVSGTFLLR	MVSGTFLLR	2	MVSGTFLLR2	34992.2	34527.2	32045.8
D3ZF97	D3ZF97	D3ZF97_RAT	Erlec1	Endoplasmic reticulum lectin	1	MVSHFYGNGDICDITDKPR	MVSHFYGNGDIC(UniMod:4)DITDKPR	4	MVSHFYGNGDIC(UniMod:4)DITDKPR4	6323.71	5800.96	7631.92
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	MVSHLAEEFK	MVSHLAEEFK	2	MVSHLAEEFK2	5850.03		5958.88
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	MVSHLAEEFK	MVSHLAEEFK	3	MVSHLAEEFK3	47232.3	53611.4	71913.2
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	MVSHLAEEFKR	MVSHLAEEFKR	3	MVSHLAEEFKR3	38176.7	41228.5	62010.7
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	MVSQSQPGSR	MVSQSQPGSR	2	MVSQSQPGSR2			18754.1
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	MVSSLGSGMIR	MVSSLGSGMIR	2	MVSSLGSGMIR2	727211	743312	829827
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	MVSVQITLTNTSDGK	MVSVQITLTNTSDGK	2	MVSVQITLTNTSDGK2	6234.79	8189.64	7354.95
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	MVSYIQCK	MVSYIQC(UniMod:4)K	2	MVSYIQC(UniMod:4)K2	42244.8	47014.1	40687.8
Q5U2X5	Q5U2X5	ACK1_RAT	Tnk2	Activated CDC42 kinase 1	1	MVTELAPLGSLLDR	MVTELAPLGSLLDR	2	MVTELAPLGSLLDR2	3326.14		9390.86
P11505	Q64568;P11505;P11506	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	0	MVTGDNINTAR	MVTGDNINTAR	2	MVTGDNINTAR2	28891.1	21149.8	35739.5
Q64542	Q64542	AT2B4_RAT	Atp2b4	Plasma membrane calcium-transporting ATPase 4	1	MVTGDNVNTAR	MVTGDNVNTAR	2	MVTGDNVNTAR2	34145.9	38111.7	36783.5
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	MVTGDTLPSSGEAVLAGHNVAQEPSAAHR	MVTGDTLPSSGEAVLAGHNVAQEPSAAHR	4	MVTGDTLPSSGEAVLAGHNVAQEPSAAHR4	4869.74		5754.22
A0A096MJ11	A0A096MJ11	A0A096MJ11_RAT	Gsdmd	Gasdermin D	1	MVTIPAGSILAFR	MVTIPAGSILAFR	2	MVTIPAGSILAFR2	54238.1	27288.6	76448.9
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	MVTIWGGASLLR	MVTIWGGASLLR	2	MVTIWGGASLLR2	26258.5	38042.3	26023.4
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	MVTQFQR	MVTQFQR	2	MVTQFQR2	28792.3	30439.7	34166.6
A0A8I5ZRG0	A0A8I5ZRG0	A0A8I5ZRG0_RAT	ENSRNOG00000070269	Proteasome subunit beta type-3	1	MVTTDFQK	MVTTDFQK	2	MVTTDFQK2	619912	513649	476424
P50115	P50115	S10A8_RAT	S100a8	Protein S100-A8	1	MVTTECPQFVQNK	MVTTEC(UniMod:4)PQFVQNK	2	MVTTEC(UniMod:4)PQFVQNK2	9385.65	12344.7	8853.01
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	MVVAQQLASALSYLEDK	MVVAQQLASALSYLEDK	3	MVVAQQLASALSYLEDK3	2019.26	2824.27	
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	MVVASDKDGQPVTAEDLGVTGALTVLMK	MVVASDKDGQPVTAEDLGVTGALTVLMK	3	MVVASDKDGQPVTAEDLGVTGALTVLMK3	11398.6	4702.97	10787.9
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	MVVDAVMMLDELLQLK	MVVDAVMMLDELLQLK	2	MVVDAVMMLDELLQLK2		18936.4	16405.1
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	MVVDAVMMLDELLQLK	MVVDAVMMLDELLQLK	3	MVVDAVMMLDELLQLK3	16671.6		
Q6AYA0	Q6AYA0	RIPL2_RAT	Rilpl2	RILP-like protein 2	1	MVVDLTDPNRPR	MVVDLTDPNRPR	3	MVVDLTDPNRPR3	16590.5	20078.3	15640.4
P42123	P42123	LDHB_RAT	Ldhb	L-lactate dehydrogenase B chain	1	MVVDSAYEVIK	MVVDSAYEVIK	2	MVVDSAYEVIK2	19147.5	16134.1	12911.7
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	MVVDVSK	MVVDVSK	2	MVVDVSK2	20591.7	25256.8	31524.7
P55053	P55053	FABP5_RAT	Fabp5	Fatty acid-binding protein 5	1	MVVECVMNNAICTR	MVVEC(UniMod:4)VMNNAIC(UniMod:4)TR	2	MVVEC(UniMod:4)VMNNAIC(UniMod:4)TR2	30886.4	18217.2	26142.9
P55053	P55053	FABP5_RAT	Fabp5	Fatty acid-binding protein 5	1	MVVECVMNNAICTR	MVVEC(UniMod:4)VMNNAIC(UniMod:4)TR	3	MVVEC(UniMod:4)VMNNAIC(UniMod:4)TR3	10454.7	8265.28	8055.12
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	MVVELLHK	MVVELLHK	2	MVVELLHK2	4914.06	5444.73	4016.92
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	MVVEPGLQDDSEFLYAAQPELLQYR	MVVEPGLQDDSEFLYAAQPELLQYR	3	MVVEPGLQDDSEFLYAAQPELLQYR3		11504.4	
Q9WUD2	Q9WUD2	TRPV2_RAT	Trpv2	Transient receptor potential cation channel subfamily V member 2	1	MVVLEPLNK	MVVLEPLNK	2	MVVLEPLNK2	20173.6	21204.4	19547.8
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	MVVLGYINEAIDEGNPLK	MVVLGYINEAIDEGNPLK	3	MVVLGYINEAIDEGNPLK3	9515.03	12462	5604.37
A0A8I6A263	A0A8I6A263	A0A8I6A263_RAT	Aimp1	Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	1	MVVLLCNLKPAK	MVVLLC(UniMod:4)NLKPAK	2	MVVLLC(UniMod:4)NLKPAK2	3060.71	3057.97	2887.31
A0A8I6A263	A0A8I6A263	A0A8I6A263_RAT	Aimp1	Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	1	MVVLLCNLKPAK	MVVLLC(UniMod:4)NLKPAK	3	MVVLLC(UniMod:4)NLKPAK3	50286.4	61546.2	63753.7
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	MVVMHPMPR	MVVMHPMPR	2	MVVMHPMPR2	5758.63		5500.45
P62959	P62959	HINT1_RAT	Hint1	Adenosine 5'-monophosphoramidase HINT1	1	MVVNEGADGGQSVYHIHLHVLGGR	MVVNEGADGGQSVYHIHLHVLGGR	4	MVVNEGADGGQSVYHIHLHVLGGR4	1104.88		1802.02
P35427	P35427;A0A8I5ZNZ4	RL13A_RAT	Rpl13a	Large ribosomal subunit protein uL13	0	MVVPAALK	MVVPAALK	2	MVVPAALK2	63881.6	71024.7	62888.2
D3ZCT7	D3ZCT7	D3ZCT7_RAT	Sec23b	Protein transport protein SEC23	1	MVVPLACLLTPLK	MVVPLAC(UniMod:4)LLTPLK	2	MVVPLAC(UniMod:4)LLTPLK2	6950.16	12462.5	10613.8
B5DFC3	B5DFC3	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	1	MVVPVAALFTPLK	MVVPVAALFTPLK	2	MVVPVAALFTPLK2	26008.3	30079.6	40551
Q8R431	Q8R431	MGLL_RAT	Mgll	Monoglyceride lipase	1	MVVSDFQVFVR	MVVSDFQVFVR	2	MVVSDFQVFVR2	43881.4	21925.3	29497
A0A8I6AM38	A0A8I6AM38;G3V7Q7	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	0	MVVSFNR	MVVSFNR	2	MVVSFNR2	293204	305359	269711
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	MVVSIAEDLLR	MVVSIAEDLLR	2	MVVSIAEDLLR2	8386.11	21678.3	9517.19
Q6Y1S1	Q6Y1S1	MYD88_RAT	Myd88	Myeloid differentiation primary response protein MyD88	1	MVVVVSDDYLQSK	MVVVVSDDYLQSK	2	MVVVVSDDYLQSK2	8458.53	4417.84	13794.5
Q8CGU6	Q8CGU6	NICA_RAT	Ncstn	Nicastrin	1	MVYDMENGKFPVR	MVYDMENGKFPVR	3	MVYDMENGKFPVR3	60651.1	43429.4	51969.6
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	MVYSLVSVPEGNDISSIFELDPTTLR	MVYSLVSVPEGNDISSIFELDPTTLR	3	MVYSLVSVPEGNDISSIFELDPTTLR3	4759.02		6512.02
A0A8I6AA52	A0A8I6AA52	A0A8I6AA52_RAT	Wdr48	WD repeat-containing protein 48	1	MVYVPNWFSVDLK	MVYVPNWFSVDLK	2	MVYVPNWFSVDLK2	20785.6	16977.4	
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	MVYWTDVAGR	MVYWTDVAGR	2	MVYWTDVAGR2	51588.6	63917.9	60003.7
D4A0G0	D4A0G0	D4A0G0_RAT	Osbpl7	Oxysterol-binding protein	1	MWCTQGFAK	MWC(UniMod:4)TQGFAK	2	MWC(UniMod:4)TQGFAK2	6602.41	8788.81	4669.29
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	MWCTVSWTCLQTIR	MWC(UniMod:4)TVSWTC(UniMod:4)LQTIR	2	MWC(UniMod:4)TVSWTC(UniMod:4)LQTIR2	5492.08		10693
P29147	P29147	BDH_RAT	Bdh1	D-beta-hydroxybutyrate dehydrogenase, mitochondrial	1	MWDELPEVVR	MWDELPEVVR	2	MWDELPEVVR2	47745.9	50351.9	56911.9
Q3SWS8	Q3SWS8	RAE1L_RAT	Rae1	mRNA export factor	1	MWDLNSNQAIQIAQHDAPVK	MWDLNSNQAIQIAQHDAPVK	3	MWDLNSNQAIQIAQHDAPVK3	13221.1	3111.56	11164.1
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	MWDVSTGMCLMTLVGHDNWVR	MWDVSTGMC(UniMod:4)LMTLVGHDNWVR	3	MWDVSTGMC(UniMod:4)LMTLVGHDNWVR3	7741.9	8412.54	15354.6
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	MWEVLESTTQTK	MWEVLESTTQTK	2	MWEVLESTTQTK2	758011	808063	818058
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	MWEVLESTTQTK	MWEVLESTTQTK	3	MWEVLESTTQTK3	26204.4	35479.7	42654.5
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	MWEVQTGYCVK	MWEVQTGYC(UniMod:4)VK	2	MWEVQTGYC(UniMod:4)VK2	37697.4	20035.9	24532.6
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	MWEVQTGYCVK	MWEVQTGYC(UniMod:4)VK	3	MWEVQTGYC(UniMod:4)VK3			2107.07
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	MWFLEESNETEK	MWFLEESNETEK	2	MWFLEESNETEK2	30520	28602.9	36585.4
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	MWITNGGK	MWITNGGK	2	MWITNGGK2	92056.6	72012.8	88238.8
A0A0G2K9M5	A0A0G2K9M5;F1LWZ7	A0A0G2K9M5_RAT	Tbc1d8b	TBC1 domain family member 8B	0	MWLKPEEVLLK	MWLKPEEVLLK	3	MWLKPEEVLLK3	6669.37	12789.9	6635.37
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	MWSAVFGGGAHVPSK	MWSAVFGGGAHVPSK	3	MWSAVFGGGAHVPSK3	21838.6	14646.9	29068.6
A0A8I6AI98	A0A8I6AI98	A0A8I6AI98_RAT	ENSRNOG00000070565	Ig-like domain-containing protein	1	MWSDGDTSYNSAFTSR	MWSDGDTSYNSAFTSR	2	MWSDGDTSYNSAFTSR2	138848	126765	123443
A0A8I6AI98	A0A8I6AI98	A0A8I6AI98_RAT	ENSRNOG00000070565	Ig-like domain-containing protein	1	MWSDGDTSYNSAFTSR	MWSDGDTSYNSAFTSR	3	MWSDGDTSYNSAFTSR3	5433.58		6245.2
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	MWSQCVELAR	MWSQC(UniMod:4)VELAR	2	MWSQC(UniMod:4)VELAR2	22890.6	47504.9	23136.9
A0A8I6AS77	A0A8I6AS77	A0A8I6AS77_RAT	Ly6g6c	Lymphocyte antigen 6 family member G6C	1	MWVFSNLR	MWVFSNLR	2	MWVFSNLR2	24626.9	21180.4	21808.4
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	MYAPAWVAPEALQK	MYAPAWVAPEALQK	2	MYAPAWVAPEALQK2	1.07803e+06	1.10791e+06	1.10349e+06
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	MYAPAWVAPEALQK	MYAPAWVAPEALQK	3	MYAPAWVAPEALQK3	276689	267708	262684
A0A0G2K5L2	A0A0G2K5L2	GHC1_RAT	Slc25a22	Mitochondrial glutamate carrier 1	1	MYASMSDCLIK	MYASMSDC(UniMod:4)LIK	2	MYASMSDC(UniMod:4)LIK2	10836.2	21013.4	14394.6
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	MYDAQQQQVGTNK	MYDAQQQQVGTNK	2	MYDAQQQQVGTNK2	180333	209411	189567
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	MYDAQQQQVGTNK	MYDAQQQQVGTNK	3	MYDAQQQQVGTNK3	25306.4	40270.2	35752.7
Q9Z2K5	Q9Z2K5	LST8_RAT	Mlst8	Target of rapamycin complex subunit LST8	1	MYDLNSNNPNPIISYDGVSK	MYDLNSNNPNPIISYDGVSK	3	MYDLNSNNPNPIISYDGVSK3	5552.02		7979.55
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	MYDLVAGSHCLK	MYDLVAGSHC(UniMod:4)LK	2	MYDLVAGSHC(UniMod:4)LK2	33527	34423.2	35706.6
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	MYDLVAGSHCLK	MYDLVAGSHC(UniMod:4)LK	3	MYDLVAGSHC(UniMod:4)LK3	55321.8	45641.9	62344.4
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	MYEENSQPR	MYEENSQPR	2	MYEENSQPR2	58404.2	46712.5	52120.5
D3ZVC4	D3ZVC4	D3ZVC4_RAT	Arel1	Apoptosis resistant E3 ubiquitin protein ligase 1	1	MYEFAGR	MYEFAGR	2	MYEFAGR2	5806.45	9608.41	7723.07
Q8R431	Q8R431	MGLL_RAT	Mgll	Monoglyceride lipase	1	MYEGAYHVLHK	MYEGAYHVLHK	3	MYEGAYHVLHK3	33985.1	27303.2	33139.5
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	MYELAPEK	MYELAPEK	2	MYELAPEK2	4.62916e+06	5.16978e+06	5.32877e+06
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	MYENQQLGK	MYENQQLGK	2	MYENQQLGK2	93458.6	127239	80633.1
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	MYEQEWVR	MYEQEWVR	2	MYEQEWVR2	6.39095e+06	8.33857e+06	8.32778e+06
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	MYEQEWVR	MYEQEWVR	3	MYEQEWVR3	10710.2	14624.3	14364.4
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	MYESFIESLPFLK	MYESFIESLPFLK	2	MYESFIESLPFLK2	220172	249193	249735
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	MYESFIESLPFLK	MYESFIESLPFLK	3	MYESFIESLPFLK3	62117.6	51356	52002.5
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	MYEVVYK	MYEVVYK	1	MYEVVYK1	6164.85	3657.67	2784.48
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	MYEVVYK	MYEVVYK	2	MYEVVYK2	162466	170780	176250
P24062	P24062	IGF1R_RAT	Igf1r	Insulin-like growth factor 1 receptor	1	MYFAFNPK	MYFAFNPK	2	MYFAFNPK2		6501.19	3465.11
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	MYFDAVQAIETHLIR	MYFDAVQAIETHLIR	2	MYFDAVQAIETHLIR2	2710.32	6178.27	8174.03
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	MYFDAVQAIETHLIR	MYFDAVQAIETHLIR	3	MYFDAVQAIETHLIR3	38136.7	38486.5	31444.6
D4A224	D4A224	D4A224_RAT	Ric1	Protein RIC1 homolog	1	MYFLSGWPK	MYFLSGWPK	2	MYFLSGWPK2	4038.1	4328.61	8201.62
P15978	P15978	HA11_RAT	RT1-Aw2	Class I histocompatibility antigen, Non-RT1.A alpha-1 chain	1	MYGCDVGSDGSLLR	MYGC(UniMod:4)DVGSDGSLLR	2	MYGC(UniMod:4)DVGSDGSLLR2	84617.1	66712	77064.8
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	MYGFVNHALELLVIR	MYGFVNHALELLVIR	2	MYGFVNHALELLVIR2	3778.88	1879.28	826.818
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	MYGFVNHALELLVIR	MYGFVNHALELLVIR	3	MYGFVNHALELLVIR3	96826.1	72879.6	95315
M0RD40	M0RD40	M0RD40_RAT	Sik3	non-specific serine/threonine protein kinase	1	MYGGQVDER	MYGGQVDER	2	MYGGQVDER2	11769.9	9339.9	13244.3
P60203	P60203	MYPR_RAT	Plp1	Myelin proteolipid protein	1	MYGVLPWNAFPGK	MYGVLPWNAFPGK	2	MYGVLPWNAFPGK2	94860.7	115367	101636
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	MYIFFTTVAP	MYIFFTTVAP	2	MYIFFTTVAP2	1243.36	1449.12	2705.67
A0A0G2K9S8	A0A0G2K9S8	A0A0G2K9S8_RAT	Mfap5	Microfibril associated protein 5	1	MYIINNEICSR	MYIINNEIC(UniMod:4)SR	2	MYIINNEIC(UniMod:4)SR2	5231.16	9435.4	5591.94
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	MYIVISDPDMIK	MYIVISDPDMIK	2	MYIVISDPDMIK2	97333.9	85528.5	73247.6
P16036	P16036	S25A3_RAT	Slc25a3	Solute carrier family 25 member 3	1	MYKEEGLNAFYK	MYKEEGLNAFYK	2	MYKEEGLNAFYK2	10774.2	8852.02	5771.09
P16036	P16036	S25A3_RAT	Slc25a3	Solute carrier family 25 member 3	1	MYKEEGLNAFYK	MYKEEGLNAFYK	3	MYKEEGLNAFYK3	32602.4	49935.6	60246.2
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	MYLEVVR	MYLEVVR	2	MYLEVVR2	118637	145582	114360
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	MYLFYGNK	MYLFYGNK	2	MYLFYGNK2	22550.5	31195.6	19848.4
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	MYLLPDK	MYLLPDK	2	MYLLPDK2	25908.4	38929.3	26050.3
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	MYLQAAIVR	MYLQAAIVR	2	MYLQAAIVR2	17639.3	12336.1	16416.5
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	MYLSPPSIHCLGPIK	MYLSPPSIHC(UniMod:4)LGPIK	3	MYLSPPSIHC(UniMod:4)LGPIK3	34940.8	41003.8	29999
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	MYLTPSEK	MYLTPSEK	1	MYLTPSEK1	3953.98		
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	MYLTPSEK	MYLTPSEK	2	MYLTPSEK2	197480	190657	217842
Q6AYA6	Q6AYA6	CYBC1_RAT	Cybc1	Cytochrome b-245 chaperone 1	1	MYMQVETR	MYMQVETR	2	MYMQVETR2	63517	43085.6	36350
E9PSP1	E9PSP1	E9PSP1_RAT	Pltp	Phospholipid transfer protein	1	MYNFFSTFITSGMR	MYNFFSTFITSGMR	2	MYNFFSTFITSGMR2	55466.5	52684.1	47156.3
E9PSP1	E9PSP1	E9PSP1_RAT	Pltp	Phospholipid transfer protein	1	MYNFFSTFITSGMR	MYNFFSTFITSGMR	3	MYNFFSTFITSGMR3	25738.1	20624.6	14564.1
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	MYNIEPADR	MYNIEPADR	2	MYNIEPADR2	50150.7	43168	54641.8
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	MYNLVSR	MYNLVSR	2	MYNLVSR2	87810.9	93767.6	88055.7
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	MYPELTLPLFSEVSQR	MYPELTLPLFSEVSQR	2	MYPELTLPLFSEVSQR2	34758.8	33420	43062.8
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	MYPELTLPLFSEVSQR	MYPELTLPLFSEVSQR	3	MYPELTLPLFSEVSQR3	7309.81	11165.8	10832.1
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	MYPIDFEK	MYPIDFEK	2	MYPIDFEK2	62236.1	69547.5	74105.5
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	MYPIDFEKDDDSNFHMDFIVAASNLR	MYPIDFEKDDDSNFHMDFIVAASNLR	4	MYPIDFEKDDDSNFHMDFIVAASNLR4	52735.6	37716.7	30982.7
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	MYPMHVFAYR	MYPMHVFAYR	2	MYPMHVFAYR2	16947.2	16916.6	14827.5
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	MYPMHVFAYR	MYPMHVFAYR	3	MYPMHVFAYR3	91946.7	95308.3	79266.5
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	MYPPAFR	MYPPAFR	2	MYPPAFR2	529306	438349	445681
Q9WTN5	Q9WTN5	TPC1_RAT	Tpcn1	Two pore calcium channel protein 1	1	MYQEEIQEWYEEHAR	MYQEEIQEWYEEHAR	3	MYQEEIQEWYEEHAR3	3909.17	4447.63	5745.21
P06760	P06760	BGLR_RAT	Gusb	Beta-glucuronidase	1	MYQKPIIQSEYGADAVSGLHEDPPR	MYQKPIIQSEYGADAVSGLHEDPPR	4	MYQKPIIQSEYGADAVSGLHEDPPR4	14524.5		12123.7
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	MYQPLLAVGTSNGSVLVYHLTSGLLHK	MYQPLLAVGTSNGSVLVYHLTSGLLHK	4	MYQPLLAVGTSNGSVLVYHLTSGLLHK4	4988.86	5172.87	5556.72
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	MYQTQVSDAGLYR	MYQTQVSDAGLYR	2	MYQTQVSDAGLYR2	4230.66	6005.02	5760.36
A0A8I6A5W7	A0A8I6A5W7	A0A8I6A5W7_RAT	Ccdc88a	Coiled coil domain containing 88A	1	MYRDELDALR	MYRDELDALR	3	MYRDELDALR3	10014.2	6070.45	
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	MYSGHGSHVTSVR	MYSGHGSHVTSVR	3	MYSGHGSHVTSVR3	32200.8		22208
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	MYSINGYTFGSLPGLSMCAEDR	MYSINGYTFGSLPGLSMC(UniMod:4)AEDR	3	MYSINGYTFGSLPGLSMC(UniMod:4)AEDR3	266677	217939	158637
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	MYSINGYTFGSLPGLSMCAEDRVK	MYSINGYTFGSLPGLSMC(UniMod:4)AEDRVK	3	MYSINGYTFGSLPGLSMC(UniMod:4)AEDRVK3	18336.8	18793.4	8630.55
Q6AXN4	Q6AXN4	NDC1_RAT	Ndc1	Nucleoporin NDC1	1	MYSSYSVEPK	MYSSYSVEPK	2	MYSSYSVEPK2	8643.13	6965.15	6378.33
Q9JM04	Q9JM04	IPO13_RAT	Ipo13	Importin-13	1	MYSTVPQASALDLTR	MYSTVPQASALDLTR	2	MYSTVPQASALDLTR2	7052.2	2532	5565.86
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	MYSVLTK	MYSVLTK	2	MYSVLTK2	92627	99287.1	107773
B0BNE5	B0BNE5	ESTD_RAT	Esd	S-formylglutathione hydrolase	1	MYSYVTEELPQLINANFPVDPQR	MYSYVTEELPQLINANFPVDPQR	3	MYSYVTEELPQLINANFPVDPQR3	12213.6	5507.7	9489.34
P48032	P48032	TIMP3_RAT	Timp3	Metalloproteinase inhibitor 3	1	MYTGLCNFVER	MYTGLC(UniMod:4)NFVER	2	MYTGLC(UniMod:4)NFVER2	1.18337e+06	1.1431e+06	1.14848e+06
P48032	P48032	TIMP3_RAT	Timp3	Metalloproteinase inhibitor 3	1	MYTGLCNFVER	MYTGLC(UniMod:4)NFVER	3	MYTGLC(UniMod:4)NFVER3	3938.29	3332.16	7222.96
Q5U2X1	Q5U2X1	FBX9_RAT	Fbxo9	F-box only protein 9	1	MYTPLFFAR	MYTPLFFAR	2	MYTPLFFAR2	1855.19	4536.37	6432.39
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	MYVAVWTPYGILR	MYVAVWTPYGILR	2	MYVAVWTPYGILR2	275398	225716	196205
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	MYVAVWTPYGILR	MYVAVWTPYGILR	3	MYVAVWTPYGILR3	10488.9	7828.47	7218.77
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	MYVDPSEINPSMPQR	MYVDPSEINPSMPQR	2	MYVDPSEINPSMPQR2	38489.2	33956.2	31310.1
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	MYVDPSEINPSMPQR	MYVDPSEINPSMPQR	3	MYVDPSEINPSMPQR3	30726.4	36452.6	27236
A0A8I6GK59	A0A8I6GK59	A0A8I6GK59_RAT	Bmp2k	BMP-2 inducible kinase	1	MYVNNTPDLNICK	MYVNNTPDLNIC(UniMod:4)K	2	MYVNNTPDLNIC(UniMod:4)K2	6109.33	5703.94	6561.76
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	MYVQTVLDVHK	MYVQTVLDVHK	2	MYVQTVLDVHK2	3181.47	1715.28	2360.71
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	MYVQTVLDVHK	MYVQTVLDVHK	3	MYVQTVLDVHK3	44662.9	51351.6	41924.3
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	MYVQTVLDVHKK	MYVQTVLDVHKK	3	MYVQTVLDVHKK3	8091.83	11049.1	9341.31
Q9QYP1	Q9QYP1	LRP4_RAT	Lrp4	Low-density lipoprotein receptor-related protein 4	1	MYWVDAK	MYWVDAK	2	MYWVDAK2	4421.33	4117.56	4548.68
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	MYYSGVDLTK	MYYSGVDLTK	2	MYYSGVDLTK2	2.9375e+06	2.15237e+06	1.88086e+06
P0C2X9	P0C2X9	AL4A1_RAT	Aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1	NAAGNFYINDK	NAAGNFYINDK	2	NAAGNFYINDK2	43935.4	47617.3	45377
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	NAAHAIQK	NAAHAIQK	2	NAAHAIQK2			22511.4
Q68FT3	Q68FT3	PYRD2_RAT	Pyroxd2	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2	1	NAAHIVFR	NAAHIVFR	2	NAAHIVFR2	2738.92	5006.59	6153.62
D3ZBX9	D3ZBX9	D3ZBX9_RAT	Ccdc92	Coiled-coil domain containing 92	1	NAAIAVLENTVR	NAAIAVLENTVR	2	NAAIAVLENTVR2	61546	66840.9	57340.8
D3ZBX9	D3ZBX9	D3ZBX9_RAT	Ccdc92	Coiled-coil domain containing 92	1	NAAIAVLENTVR	NAAIAVLENTVR	3	NAAIAVLENTVR3		5331.49	1882.63
F1M6V8	F1M6V8	F1M6V8_RAT	Strn4	Striatin 4	1	NAALDVEPIHAFR	NAALDVEPIHAFR	2	NAALDVEPIHAFR2	3781.53	2762.48	1450.03
F1M6V8	F1M6V8	F1M6V8_RAT	Strn4	Striatin 4	1	NAALDVEPIHAFR	NAALDVEPIHAFR	3	NAALDVEPIHAFR3	17702	12980.5	15992.8
Q3B8N7	Q3B8N7	T22D4_RAT	Tsc22d4	TSC22 domain family protein 4	1	NAALEQENGLLR	NAALEQENGLLR	2	NAALEQENGLLR2	92030.5	85647.8	80309
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	NAALNTIVTVYNVHGDQVFK	NAALNTIVTVYNVHGDQVFK	3	NAALNTIVTVYNVHGDQVFK3	28022	44047.1	25365
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	NAALNTIVTVYNVHGDQVFK	NAALNTIVTVYNVHGDQVFK	4	NAALNTIVTVYNVHGDQVFK4	10435	3434.33	8008.79
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	NAALSTQLR	NAALSTQLR	2	NAALSTQLR2	48397	42176.2	67042.4
B2RYL4	B2RYL4	B2RYL4_RAT	Armc6	Armadillo repeat containing 6	1	NAANTELTCCGIR	NAANTELTC(UniMod:4)C(UniMod:4)GIR	2	NAANTELTC(UniMod:4)C(UniMod:4)GIR2	9109.55	5149.81	7616.43
B1H282	B1H282	B1H282_RAT	Colgalt1	Collagen beta(1-O)galactosyltransferase 1	1	NAAPALPATLGALER	NAAPALPATLGALER	2	NAAPALPATLGALER2	10530.9	16907.8	11896.2
D3Z9L0	D3Z9L0	D3Z9L0_RAT	Agk	Acylglycerol kinase, mitochondrial	1	NAAPILHLSGMDVTVVK	NAAPILHLSGMDVTVVK	3	NAAPILHLSGMDVTVVK3	23545.4	24673	17606
P36876	P36876	2ABA_RAT	Ppp2r2a	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	1	NAAQFLLSTNDK	NAAQFLLSTNDK	2	NAAQFLLSTNDK2	30303.5	43095.7	28504
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	NAAQVLVGIPLETGQK	NAAQVLVGIPLETGQK	2	NAAQVLVGIPLETGQK2	65055.7	70759.5	59710.5
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	NAAQVLVGIPLETGQK	NAAQVLVGIPLETGQK	3	NAAQVLVGIPLETGQK3	43662.9	49934	48818.1
F1M3G7	F1M3G7	AKP13_RAT	Akap13	A-kinase anchor protein 13	1	NAASDAEMNQR	NAASDAEMNQR	2	NAASDAEMNQR2	3080.98	4317.45	
F7FA09	F7FA09	F7FA09_RAT	Pex11b	Peroxisomal biogenesis factor 11 beta	1	NACDLFIPLDK	NAC(UniMod:4)DLFIPLDK	2	NAC(UniMod:4)DLFIPLDK2	4321.98	3903.05	5549.88
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	NACDSDYDFDVFVVR	NAC(UniMod:4)DSDYDFDVFVVR	2	NAC(UniMod:4)DSDYDFDVFVVR2	14055.4	9670.36	11898.6
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	NACDSDYDFDVFVVR	NAC(UniMod:4)DSDYDFDVFVVR	3	NAC(UniMod:4)DSDYDFDVFVVR3	4407.02	3297.56	
G3V8Z6	G3V8Z6	G3V8Z6_RAT	Krit1	KRIT1, ankyrin repeat containing	1	NACEGDSELLSHLLDK	NAC(UniMod:4)EGDSELLSHLLDK	3	NAC(UniMod:4)EGDSELLSHLLDK3	12288.5	6774.33	
Q9ER24	Q9ER24	ATX10_RAT	Atxn10	Ataxin-10	1	NACIECSVNQNSIR	NAC(UniMod:4)IEC(UniMod:4)SVNQNSIR	2	NAC(UniMod:4)IEC(UniMod:4)SVNQNSIR2	2060.79		3048.73
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	NACLQTSSLAVR	NAC(UniMod:4)LQTSSLAVR	2	NAC(UniMod:4)LQTSSLAVR2	15684.3	14387.6	14354.7
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	NACPATVAPVCGSDASTYSNECELQR	NAC(UniMod:4)PATVAPVC(UniMod:4)GSDASTYSNEC(UniMod:4)ELQR	3	NAC(UniMod:4)PATVAPVC(UniMod:4)GSDASTYSNEC(UniMod:4)ELQR3	2931.38	1870.36	1474.04
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	NACQMLMILGLEGR	NAC(UniMod:4)QMLMILGLEGR	2	NAC(UniMod:4)QMLMILGLEGR2	5160.58		2070.78
F1LUF8	F1LUF8	F1LUF8_RAT	Bnc1	Basonuclin 1	1	NACSMKTHEK	NAC(UniMod:4)SMKTHEK	2	NAC(UniMod:4)SMKTHEK2			4503.67
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	NACVDQFTTLCVTGVPENCK	NAC(UniMod:4)VDQFTTLC(UniMod:4)VTGVPENC(UniMod:4)K	3	NAC(UniMod:4)VDQFTTLC(UniMod:4)VTGVPENC(UniMod:4)K3	15752.9	7243.8	10300.1
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	NADAAFLR	NADAAFLR	2	NADAAFLR2	28211.6	43871.1	33821.3
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	NADDDRPPRR	NADDDRPPRR	3	NADDDRPPRR3			3036.71
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	NADDEHLVQSVAK	NADDEHLVQSVAK	2	NADDEHLVQSVAK2	768.747		
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	NADDEHLVQSVAK	NADDEHLVQSVAK	3	NADDEHLVQSVAK3	23447.9	29203.4	14143.6
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	NADELVK	NADELVK	1	NADELVK1	9158.08	5584.37	2005.87
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	NADELVK	NADELVK	2	NADELVK2	219189	235644	269202
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	NADETVLQK	NADETVLQK	2	NADETVLQK2	11394.1	4614.88	2614.33
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	NADGSIQYLHVQLLAQPTAACR	NADGSIQYLHVQLLAQPTAAC(UniMod:4)R	3	NADGSIQYLHVQLLAQPTAAC(UniMod:4)R3	28159.2	25486.5	22062.2
Q304F3	Q304F3	Q304F3_RAT	Tnnc2	Troponin C2, fast skeletal type	1	NADGYIDAEELAEIFR	NADGYIDAEELAEIFR	2	NADGYIDAEELAEIFR2	10240.6	16620.3	
B4F795	B4F795	CTL2_RAT	Slc44a2	Choline transporter-like protein 2	1	NADKPFLFYFNIVK	NADKPFLFYFNIVK	2	NADKPFLFYFNIVK2	24867.3	21506.4	19977.6
B4F795	B4F795	CTL2_RAT	Slc44a2	Choline transporter-like protein 2	1	NADKPFLFYFNIVK	NADKPFLFYFNIVK	3	NADKPFLFYFNIVK3	217422	238123	196954
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	NADLSTFYQNR	NADLSTFYQNR	2	NADLSTFYQNR2	141691	147011	150379
Q78P75	Q78P75	DYL2_RAT	Dynll2	Dynein light chain 2, cytoplasmic	1	NADMSEDMQQDAVDCATQAMEK	NADMSEDMQQDAVDC(UniMod:4)ATQAMEK	3	NADMSEDMQQDAVDC(UniMod:4)ATQAMEK3	51529	49821.4	55724.1
P63170	P63170	DYL1_RAT	Dynll1	Dynein light chain 1, cytoplasmic	1	NADMSEEMQQDSVECATQALEK	NADMSEEMQQDSVEC(UniMod:4)ATQALEK	3	NADMSEEMQQDSVEC(UniMod:4)ATQALEK3	164276	194729	176513
A0A8I6G6W8	A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	NADMSSQAVVK	NADMSSQAVVK	2	NADMSSQAVVK2	18456.5	8994.91	14374.7
Q6BBI8	Q6BBI8	UFC1_RAT	Ufc1	Ubiquitin-fold modifier-conjugating enzyme 1	1	NADNDWFR	NADNDWFR	2	NADNDWFR2	17685.9		12706.4
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	NADPETTLLVYLR	NADPETTLLVYLR	2	NADPETTLLVYLR2	50694.6	55308.4	47112.5
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	NADPETTLLVYLR	NADPETTLLVYLR	3	NADPETTLLVYLR3		3362.36	1924.9
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	NADPILISLK	NADPILISLK	2	NADPILISLK2	472722	494321	493599
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	NADQSLIR	NADQSLIR	2	NADQSLIR2	33201.1	37263.8	40609.3
P18484	P18484;A0A8I6A4J2	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	0	NADVELQQR	NADVELQQR	2	NADVELQQR2	73642.7	84088.7	65327.6
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	NADYNITTR	NADYNITTR	2	NADYNITTR2	2966.27	2203.47	
P08650	P08650	CO5_RAT	C5	Complement C5	1	NADYSYSMWK	NADYSYSMWK	2	NADYSYSMWK2	382730	254668	267986
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	NAEAVLQGPGISGK	NAEAVLQGPGISGK	2	NAEAVLQGPGISGK2	391453	445830	389164
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	NAEAVLQGPGISGK	NAEAVLQGPGISGK	3	NAEAVLQGPGISGK3	17596.8	21024.7	29407.7
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	NAECINTAGSYR	NAEC(UniMod:4)INTAGSYR	2	NAEC(UniMod:4)INTAGSYR2	2930.66	4304.11	2705.26
D3Z8W5	D3Z8W5	D3Z8W5_RAT	Ube2l3	Ube2l3 protein	1	NAEEFTK	NAEEFTK	1	NAEEFTK1	2437.41	1626.43	932.042
D3Z8W5	D3Z8W5	D3Z8W5_RAT	Ube2l3	Ube2l3 protein	1	NAEEFTK	NAEEFTK	2	NAEEFTK2	70577.8	66110.8	59936.7
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	NAEELQTK	NAEELQTK	2	NAEELQTK2	12724.8	1.47887e+07	142742
Q63621	Q63621	IL1AP_RAT	Il1rap	Interleukin-1 receptor accessory protein	1	NAEGEAEQAAK	NAEGEAEQAAK	2	NAEGEAEQAAK2	136002	124816	
B2RYD7	B2RYD7	B2RYD7_RAT	Stt3b	dolichyl-diphosphooligosaccharide--protein glycotransferase	1	NAEIGNK	NAEIGNK	1	NAEIGNK1			10624.5
A0A8I6AC50	A0A8I6AC50	A0A8I6AC50_RAT	Ttc13	Tetratricopeptide repeat domain 13	1	NAELALFELSR	NAELALFELSR	2	NAELALFELSR2		2533.03	
Q9Z2X5	Q9Z2X5	HOME3_RAT	Homer3	Homer protein homolog 3	1	NAELEQQLR	NAELEQQLR	2	NAELEQQLR2	22800.5	18731	23950.7
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	NAEMAQVSEISSVPSSDR	NAEMAQVSEISSVPSSDR	2	NAEMAQVSEISSVPSSDR2	2843.86		
P11507	Q64578;P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	0	NAENAIEALK	NAENAIEALK	2	NAENAIEALK2	95848.4	85627.3	77728.3
P11507	Q64578;P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	0	NAENAIEALKEYEPEMGK	NAENAIEALKEYEPEMGK	3	NAENAIEALKEYEPEMGK3	99500.8	100854	109281
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	NAEQAAAQLK	NAEQAAAQLK	2	NAEQAAAQLK2	7494.65	9985	13529.4
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	NAEQFKDQADK	NAEQFKDQADK	2	NAEQFKDQADK2	859714	1.07008e+06	966800
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	NAEQFKDQADK	NAEQFKDQADK	3	NAEQFKDQADK3	2.39574e+06	3.65003e+06	11456.5
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	NAESAIEALK	NAESAIEALK	2	NAESAIEALK2	135425	126968	136835
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	NAESAIEALKEYEPEMGK	NAESAIEALKEYEPEMGK	3	NAESAIEALKEYEPEMGK3	86484.1	80848.6	85561.6
P24049	D3Z9G9;A0A8I5ZRW8;A0A8I6A6U8;P24049;A0A8I5ZUD0	RL17_RAT	Rpl17	Large ribosomal subunit protein uL22	0	NAESNAELK	NAESNAELK	2	NAESNAELK2		32004.2	
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	NAEVLYSIESGNIGNSFTIDPILGSIK	NAEVLYSIESGNIGNSFTIDPILGSIK	3	NAEVLYSIESGNIGNSFTIDPILGSIK3	4218.93	6875.36	6194.41
P13832	P13832	MRLCA_RAT	Rlc-a	Myosin regulatory light chain RLC-A	1	NAFACFDEEAIGTIQEDYLR	NAFAC(UniMod:4)FDEEAIGTIQEDYLR	3	NAFAC(UniMod:4)FDEEAIGTIQEDYLR3	217573	252637	266185
Q64122	Q64122	MYL9_RAT	Myl9	Myosin regulatory light polypeptide 9	1	NAFACFDEEASGFIHEDHLR	NAFAC(UniMod:4)FDEEASGFIHEDHLR	3	NAFAC(UniMod:4)FDEEASGFIHEDHLR3	44278.9	505240	37655.2
Q64122	Q64122	MYL9_RAT	Myl9	Myosin regulatory light polypeptide 9	1	NAFACFDEEASGFIHEDHLR	NAFAC(UniMod:4)FDEEASGFIHEDHLR	4	NAFAC(UniMod:4)FDEEASGFIHEDHLR4	1.78066e+06	1.86872e+06	2.02216e+06
A0A8I5ZTN5	A0A8I5ZTN5	A0A8I5ZTN5_RAT	Adsl	Adenylosuccinate lyase	1	NAFDLLLPK	NAFDLLLPK	2	NAFDLLLPK2	23355.3	18541.6	18655.7
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	NAFDYFNNMR	NAFDYFNNMR	2	NAFDYFNNMR2	140198	162056	135420
O55043	O55043	ARHG7_RAT	Arhgef7	Rho guanine nucleotide exchange factor 7	1	NAFEISGSMIER	NAFEISGSMIER	2	NAFEISGSMIER2	22371.7	33961.5	26912.8
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	NAFERGEDPLAGDQNDHDMDSIAGVLK	NAFERGEDPLAGDQNDHDMDSIAGVLK	4	NAFERGEDPLAGDQNDHDMDSIAGVLK4	5721.23	2539.25	6132.87
B4F795	B4F795	CTL2_RAT	Slc44a2	Choline transporter-like protein 2	1	NAFFLLMR	NAFFLLMR	2	NAFFLLMR2	45899.4	48523.6	42991.8
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	NAFISCTWK	NAFISC(UniMod:4)TWK	2	NAFISC(UniMod:4)TWK2	46740.5	36688.9	44550.4
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	NAFMMLIHADQDR	NAFMMLIHADQDR	3	NAFMMLIHADQDR3	25974.3	24421.1	20543.1
A0A8I5ZU67	A0A8I5ZMW1;A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	0	NAFSLLGK	NAFSLLGK	2	NAFSLLGK2	19149.6	19367.4	18469.2
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	NAFVTGIAR	NAFVTGIAR	2	NAFVTGIAR2	265889	318137	260621
A0A8I6A9R8	A0A8I6A9R8	A0A8I6A9R8_RAT	Cope	Coatomer subunit epsilon	1	NAFYIGSYQQCINEAQR	NAFYIGSYQQC(UniMod:4)INEAQR	3	NAFYIGSYQQC(UniMod:4)INEAQR3	22690.4	20225.2	39489.2
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	NAGAFGFNISFLCK	NAGAFGFNISFLC(UniMod:4)K	2	NAGAFGFNISFLC(UniMod:4)K2	44422.6	45246.7	38828.1
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	NAGATCYMNSVIQQLYMIPSIR	NAGATC(UniMod:4)YMNSVIQQLYMIPSIR	3	NAGATC(UniMod:4)YMNSVIQQLYMIPSIR3	13883.3	10864.2	11999.2
P61980	A0A8I5ZZG4;P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	NAGAVIGK	NAGAVIGK	1	NAGAVIGK1	9525.37	6113.72	6938.11
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	NAGDKEISGGNVSPFAPGVSSR	NAGDKEISGGNVSPFAPGVSSR	3	NAGDKEISGGNVSPFAPGVSSR3	17426.6	20698.5	25543.4
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	NAGLAFIELVNEGR	NAGLAFIELVNEGR	2	NAGLAFIELVNEGR2	22491.8	30847.4	24331.6
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	NAGLAFIELVNEGR	NAGLAFIELVNEGR	3	NAGLAFIELVNEGR3	1790.63	4096.1	
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	NAGLKPFEQVK	NAGLKPFEQVK	2	NAGLKPFEQVK2	6433.78	3555.77	424.729
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	NAGLKPFEQVK	NAGLKPFEQVK	3	NAGLKPFEQVK3	39143.6	25692.2	38222
Q63691	Q63691	CD14_RAT	Cd14	Monocyte differentiation antigen CD14	1	NAGMETTSGVCSALAAAR	NAGMETTSGVC(UniMod:4)SALAAAR	2	NAGMETTSGVC(UniMod:4)SALAAAR2	4896.16	6167.66	5589.17
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	NAGPQIDR	NAGPQIDR	2	NAGPQIDR2	31581.9	22919.3	34391
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	NAGQAVTIVAQYRPEEYSR	NAGQAVTIVAQYRPEEYSR	3	NAGQAVTIVAQYRPEEYSR3	40530	26046.9	24942.9
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	NAGSALYYTQSEDNIYEDIIYPAK	NAGSALYYTQSEDNIYEDIIYPAK	3	NAGSALYYTQSEDNIYEDIIYPAK3	3587.25	2083.83	4300.69
O08651	O08651	SERA_RAT	Phgdh	D-3-phosphoglycerate dehydrogenase	1	NAGTCLSPAVIVGLLR	NAGTC(UniMod:4)LSPAVIVGLLR	2	NAGTC(UniMod:4)LSPAVIVGLLR2	12618	6495.97	7837.51
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	NAGVEGSLIVEK	NAGVEGSLIVEK	2	NAGVEGSLIVEK2	258363	216936	58599.1
Q9WVJ4	Q9WVJ4	SYJ2B_RAT	Synj2bp	Synaptojanin-2-binding protein	1	NAGYAVSLR	NAGYAVSLR	2	NAGYAVSLR2	19303.4	4356.46	29582.7
F1M0B5	F1M0B5	F1M0B5_RAT	Cd84	CD84 molecule	1	NAHLTESR	NAHLTESR	2	NAHLTESR2			59318.4
D4A3V2	D4A3V2	D4A3V2_RAT	Ndufa6	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6	1	NAHVTDPR	NAHVTDPR	2	NAHVTDPR2			16947.5
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	NAIAETIIALTK	NAIAETIIALTK	2	NAIAETIIALTK2	53076.8	38291.7	70984.6
F7ELS2	F7ELS2	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	1	NAIDDGCVVPGAGAVEVALAEALIK	NAIDDGC(UniMod:4)VVPGAGAVEVALAEALIK	3	NAIDDGC(UniMod:4)VVPGAGAVEVALAEALIK3		6409.16	
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	NAIEASHK	NAIEASHK	1	NAIEASHK1			1258.05
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	NAIEASHK	NAIEASHK	2	NAIEASHK2			212852
Q66HG5	Q66HG5	TM9S2_RAT	Tm9sf2	Transmembrane 9 superfamily member 2	1	NAIEHPVR	NAIEHPVR	2	NAIEHPVR2	39686.9	39619.9	27708.4
P51111	P51111	HD_RAT	Htt	Huntingtin	1	NAIHNHIR	NAIHNHIR	2	NAIHNHIR2			17033.9
A0A0G2JXD9	A0A0G2JXD9	A0A0G2JXD9_RAT	Dop1b	DOP1 leucine zipper like protein B	1	NAILEELPR	NAILEELPR	2	NAILEELPR2	11837.4	3631.37	7816.9
Q8K4B7	Q8K4B7;Q9EQ76	FMO4_RAT	Fmo4	Dimethylaniline monooxygenase [N-oxide-forming] 4	0	NAILTQWDR	NAILTQWDR	2	NAILTQWDR2	5033.83	5341.79	8520.76
P41565	P41565	IDHG1_RAT	Idh3g	Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial	1	NAIMAIR	NAIMAIR	2	NAIMAIR2	132509	112742	133702
Q6GQP4	Q6GQP4	RAB31_RAT	Rab31	Ras-related protein Rab-31	1	NAINIEELFQGISR	NAINIEELFQGISR	2	NAINIEELFQGISR2	10827.7	13896.9	28814.7
Q6GQP4	Q6GQP4	RAB31_RAT	Rab31	Ras-related protein Rab-31	1	NAINIEELFQGISR	NAINIEELFQGISR	3	NAINIEELFQGISR3	4574.92	10547.4	2099.66
B0BN19	B0BN19	B0BN19_RAT	Rab22a	RAB22A, member RAS oncogene family	1	NAININELFIEISR	NAININELFIEISR	2	NAININELFIEISR2	8078.78	4622.51	6970.76
B0BN19	B0BN19	B0BN19_RAT	Rab22a	RAB22A, member RAS oncogene family	1	NAININELFIEISR	NAININELFIEISR	3	NAININELFIEISR3	2017.25		
Q80ZF4	Q80ZF4	Q80ZF4_RAT	Mapkapk2	non-specific serine/threonine protein kinase	1	NAITDDYK	NAITDDYK	2	NAITDDYK2	14299	15144.5	13413.5
A0A0G2JWA3	A0A0G2JWA3	A0A0G2JWA3_RAT	Xpo7	Exportin 7	1	NAITDVTR	NAITDVTR	2	NAITDVTR2	15812	7701.53	14580.8
Q68A21	Q68A21	PURB_RAT	Purb	Transcriptional activator protein Pur-beta	1	NAITVPFK	NAITVPFK	1	NAITVPFK1	15096.4	14541.4	
Q68A21	Q68A21	PURB_RAT	Purb	Transcriptional activator protein Pur-beta	1	NAITVPFK	NAITVPFK	2	NAITVPFK2	543680	558753	529213
Q9EQV9	Q9EQV9	CBPB2_RAT	Cpb2	Carboxypeptidase B2	1	NAIWIDCGIHAR	NAIWIDC(UniMod:4)GIHAR	3	NAIWIDC(UniMod:4)GIHAR3	10475.8	8789.59	8747.21
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	NAKPVSILR	NAKPVSILR	2	NAKPVSILR2	52270	34131.7	36864.4
Q9ES71	Q9ES71	GNPAT_RAT	Gnpat	Dihydroxyacetone phosphate acyltransferase	1	NALAAFVR	NALAAFVR	2	NALAAFVR2	17087.3	22820.7	18609.9
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	NALAEATVQAAGMAADGVK	NALAEATVQAAGMAADGVK	2	NALAEATVQAAGMAADGVK2	6071.6	3231.32	7628.27
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	NALAEATVQAAGMAADGVK	NALAEATVQAAGMAADGVK	3	NALAEATVQAAGMAADGVK3	21014.9	32474	25234.8
Q29RW1	P02563;P02564;Q29RW1	MYH4_RAT	Myh4	Myosin-4	0	NALAHALQSAR	NALAHALQSAR	3	NALAHALQSAR3	6329.01	5269.72	3777.05
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	NALANPLYCPDYR	NALANPLYC(UniMod:4)PDYR	2	NALANPLYC(UniMod:4)PDYR2	279018	279493	306978
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	NALANPLYCPDYR	NALANPLYC(UniMod:4)PDYR	3	NALANPLYC(UniMod:4)PDYR3	24098.5	11353.1	20728.8
D3ZIT4	D3ZIT4	D3ZIT4_RAT	Anapc7	Anaphase promoting complex subunit 7	1	NALANQSDCVLHR	NALANQSDC(UniMod:4)VLHR	3	NALANQSDC(UniMod:4)VLHR3	14011.7	6383.91	14628.8
A1L1J9	A1L1J9	LMF2_RAT	Lmf2	Lipase maturation factor 2	1	NALAQTLNWVR	NALAQTLNWVR	2	NALAQTLNWVR2	132696	119296	127962
A1L1J9	A1L1J9	LMF2_RAT	Lmf2	Lipase maturation factor 2	1	NALAQTLNWVR	NALAQTLNWVR	3	NALAQTLNWVR3	7136.36	4557.12	3193
Q5BK32	Q5BK32	FAF2_RAT	Faf2	FAS-associated factor 2	1	NALCAPEVISLINSR	NALC(UniMod:4)APEVISLINSR	2	NALC(UniMod:4)APEVISLINSR2	50934.9	46892.4	58072.2
Q5BK32	Q5BK32	FAF2_RAT	Faf2	FAS-associated factor 2	1	NALCAPEVISLINSR	NALC(UniMod:4)APEVISLINSR	3	NALC(UniMod:4)APEVISLINSR3	14506.5	12819.8	17164
D3ZRJ7	D3ZRJ7	D3ZRJ7_RAT	Lrrk1	non-specific serine/threonine protein kinase	1	NALESLPDK	NALESLPDK	2	NALESLPDK2	2978.4	4236.32	
P0DMW0;P0DMW1	P0DMW0;P0DMW1;P55063	HS71A_RAT;HS71B_RAT	Hspa1a;Hspa1b	Heat shock 70 kDa protein 1A	0	NALESYAFNMK	NALESYAFNMK	2	NALESYAFNMK2	10482.2	7134.82	10334.5
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	NALFCLETAWASISNSQESHVYTK	NALFC(UniMod:4)LETAWASISNSQESHVYTK	3	NALFC(UniMod:4)LETAWASISNSQESHVYTK3	340703	220207	220963
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	NALFCLETAWASISNSQESHVYTK	NALFC(UniMod:4)LETAWASISNSQESHVYTK	4	NALFC(UniMod:4)LETAWASISNSQESHVYTK4	21158.7	27743.5	22245.3
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	NALGHIDK	NALGHIDK	2	NALGHIDK2	13175.5	9815.31	9762.45
F1LT49	F1LT49	F1LT49_RAT	Lrrc47	Leucine rich repeat containing 47	1	NALGPGLSPELGPLPALR	NALGPGLSPELGPLPALR	2	NALGPGLSPELGPLPALR2	4556.56	5329.7	5554.04
F1LT49	F1LT49	F1LT49_RAT	Lrrc47	Leucine rich repeat containing 47	1	NALGPGLSPELGPLPALR	NALGPGLSPELGPLPALR	3	NALGPGLSPELGPLPALR3	3292.72	2940.55	7803.66
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	NALHLAAK	NALHLAAK	2	NALHLAAK2	9239.68	10118.6	14766.1
Q68FY0	Q68FY0	QCR1_RAT	Uqcrc1	Cytochrome b-c1 complex subunit 1, mitochondrial	1	NALISHLDGTTPVCEDIGR	NALISHLDGTTPVC(UniMod:4)EDIGR	3	NALISHLDGTTPVC(UniMod:4)EDIGR3	359480	376166	387474
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	NALLGVTGAPK	NALLGVTGAPK	2	NALLGVTGAPK2	19688.8	20556.7	19813.9
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	NALLQNWLDIK	NALLQNWLDIK	2	NALLQNWLDIK2	3166.49	5965.4	5625.29
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	NALLQNWLDIKR	NALLQNWLDIKR	3	NALLQNWLDIKR3	3149.74	4478.09	3261.01
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	NALLTQISAK	NALLTQISAK	2	NALLTQISAK2	44908.4	41637.6	46320.1
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	NALNVLQR	NALNVLQR	2	NALNVLQR2	29622.9	32400.8	38161
Q63737	A0A8I6A6H0;Q63737	PHLP_RAT	Pdcl	Phosducin-like protein	0	NALPALLIYK	NALPALLIYK	2	NALPALLIYK2	49848.5	50656.3	44202.4
P04041	P04041	GPX1_RAT	Gpx1	Glutathione peroxidase 1	1	NALPAPSDDPTALMTDPK	NALPAPSDDPTALMTDPK	2	NALPAPSDDPTALMTDPK2	146872	127894	136556
P04041	P04041	GPX1_RAT	Gpx1	Glutathione peroxidase 1	1	NALPAPSDDPTALMTDPK	NALPAPSDDPTALMTDPK	3	NALPAPSDDPTALMTDPK3	7380.21	10156.2	8128.4
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	NALQNIILYHLTPGVYIGK	NALQNIILYHLTPGVYIGK	3	NALQNIILYHLTPGVYIGK3	42279.8	35116.6	55577.9
Q641X8	Q641X8;A0A0G2K273	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	0	NALSSLWGK	NALSSLWGK	2	NALSSLWGK2	140529	132204	133944
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	NALTPSSK	NALTPSSK	2	NALTPSSK2	59372.8	59709.6	62800.9
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	NALVNSR	NALVNSR	2	NALVNSR2	4.86118e+06	5.8316e+06	5.83674e+06
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	NALWHTGDTASQVR	NALWHTGDTASQVR	2	NALWHTGDTASQVR2	151287	136845	117118
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	NALWHTGDTASQVR	NALWHTGDTASQVR	3	NALWHTGDTASQVR3	1.42941e+06	1.66303e+06	1.68358e+06
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	NALWHTGHTPDQVR	NALWHTGHTPDQVR	3	NALWHTGHTPDQVR3	34846.1	39940.3	26212.1
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	NALWHTGHTPDQVR	NALWHTGHTPDQVR	4	NALWHTGHTPDQVR4	39727.1	73813.5	67043.2
D4A2G6	D4A2G6	D4A2G6_RAT	Thbs2	Thrombospondin 2	1	NALWHTGNTEGQVR	NALWHTGNTEGQVR	2	NALWHTGNTEGQVR2		1507.44	
D4A2G6	D4A2G6	D4A2G6_RAT	Thbs2	Thrombospondin 2	1	NALWHTGNTEGQVR	NALWHTGNTEGQVR	3	NALWHTGNTEGQVR3		5556.96	14146.3
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	NALWHTGNTPGQVR	NALWHTGNTPGQVR	2	NALWHTGNTPGQVR2	2.96383e+06	3.00865e+06	3.17339e+06
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	NALWHTGNTPGQVR	NALWHTGNTPGQVR	3	NALWHTGNTPGQVR3	2.83153e+07	3.16885e+07	3.38269e+07
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	NALWHTGNTPGQVR	NALWHTGNTPGQVR	4	NALWHTGNTPGQVR4	21832	15757.2	10470.6
A0A8I6GD86	A0A8I6GD86	A0A8I6GD86_RAT	Tmem181	Transmembrane protein 181	1	NALYESQLK	NALYESQLK	2	NALYESQLK2	18324.3	16141.5	22428.6
Q9ESM0	Q9ESM0	IP6K1_RAT	Ip6k1	Inositol hexakisphosphate kinase 1	1	NALYQYLHNGLDLR	NALYQYLHNGLDLR	3	NALYQYLHNGLDLR3	12944.7	8099.39	
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	NAMASTAQQLK	NAMASTAQQLK	2	NAMASTAQQLK2	26852.7	25161	30616.1
A0A8I6AVZ7	A0A8I6AVZ7	A0A8I6AVZ7_RAT	Mtcl1	Microtubule crosslinking factor 1	1	NAMCSGPAEPQVR	NAMC(UniMod:4)SGPAEPQVR	2	NAMC(UniMod:4)SGPAEPQVR2	1567.57	2748.94	889.795
O88321	O88321	O88321_RAT	Psmd4	26S proteasome non-ATPase regulatory subunit 4	1	NAMGSLASQATK	NAMGSLASQATK	2	NAMGSLASQATK2	194738	215385	220023
P48548	P48548	KCNJ5_RAT	Kcnj5	G protein-activated inward rectifier potassium channel 4	1	NAMNQDMEIGVTSQDHK	NAMNQDMEIGVTSQDHK	2	NAMNQDMEIGVTSQDHK2	3025.1	2789.33	2968.43
P48548	P48548	KCNJ5_RAT	Kcnj5	G protein-activated inward rectifier potassium channel 4	1	NAMNQDMEIGVTSQDHK	NAMNQDMEIGVTSQDHK	3	NAMNQDMEIGVTSQDHK3	36489.4	39839.7	50602.9
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	NANEMFR	NANEMFR	2	NANEMFR2	191300	240207	214517
A0A140UHX9	A0A140UHX9	A0A140UHX9_RAT	Ccz1	CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated	1	NANLIEVNEEVKK	NANLIEVNEEVKK	3	NANLIEVNEEVKK3	3274.82	4246.84	1581.17
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	NANNSFTIITPFR	NANNSFTIITPFR	2	NANNSFTIITPFR2	78305.9	83356.5	79310.8
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	NANPSELEQIVPSPAFILAAESLPK	NANPSELEQIVPSPAFILAAESLPK	3	NANPSELEQIVPSPAFILAAESLPK3	1538.91	4151.14	
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	NANSLGGGFHCWTCDVR	NANSLGGGFHC(UniMod:4)WTC(UniMod:4)DVR	2	NANSLGGGFHC(UniMod:4)WTC(UniMod:4)DVR2	4617.17	7589.72	6470.08
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	NANSLGGGFHCWTCDVR	NANSLGGGFHC(UniMod:4)WTC(UniMod:4)DVR	3	NANSLGGGFHC(UniMod:4)WTC(UniMod:4)DVR3	113667	116824	146752
P08494	P08494	MGP_RAT	Mgp	Matrix Gla protein	1	NANTFISPQQR	NANTFISPQQR	2	NANTFISPQQR2	2.07372e+06	2.41342e+06	2.14468e+06
P08494	P08494	MGP_RAT	Mgp	Matrix Gla protein	1	NANTFISPQQR	NANTFISPQQR	3	NANTFISPQQR3	102994	109814	86101.4
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	NANTYFSSSTQK	NANTYFSSSTQK	2	NANTYFSSSTQK2	37122.3	37344	62065.3
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	NAPAIIFIDELDAIAPK	NAPAIIFIDELDAIAPK	2	NAPAIIFIDELDAIAPK2	74491.5	75830.7	85457.7
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	NAPAIIFIDELDAIAPK	NAPAIIFIDELDAIAPK	3	NAPAIIFIDELDAIAPK3	23327.8	4826.45	8247.61
F1LN92	F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	1	NAPCILFIDEIDAVGR	NAPC(UniMod:4)ILFIDEIDAVGR	2	NAPC(UniMod:4)ILFIDEIDAVGR2	9144.17	6928.58	16648.9
Q6V0K7	Q6V0K7	OIT3_RAT	Oit3	Oncoprotein-induced transcript 3 protein	1	NAPLEIR	NAPLEIR	2	NAPLEIR2	186973	212534	226279
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	NAPNLNSTYNNVLQLIK	NAPNLNSTYNNVLQLIK	2	NAPNLNSTYNNVLQLIK2	6645.26	15883.3	10705.8
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	NAPNLNSTYNNVLQLIK	NAPNLNSTYNNVLQLIK	3	NAPNLNSTYNNVLQLIK3	3478.44	5376.71	5481.5
A0A8J8XD91	A0A8J8XD91	A0A8J8XD91_RAT	Timm17b	Translocase of inner mitochondrial membrane 17b	1	NAPPFLEDPNQLTPK	NAPPFLEDPNQLTPK	2	NAPPFLEDPNQLTPK2	49480	43012.6	42312.5
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	NAPSTAGLGYGSWEIDPK	NAPSTAGLGYGSWEIDPK	2	NAPSTAGLGYGSWEIDPK2	10928.8	19156.8	28701
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	NAPSTAGLGYGSWEIDPK	NAPSTAGLGYGSWEIDPK	3	NAPSTAGLGYGSWEIDPK3	5218.6	2990.83	9976.18
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	NAPTPQEFK	NAPTPQEFK	2	NAPTPQEFK2	2.11578e+06	2.20856e+06	2.04549e+06
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	NAQAPLALTESHLATLASSSQSPEAIK	NAQAPLALTESHLATLASSSQSPEAIK	3	NAQAPLALTESHLATLASSSQSPEAIK3	13539.2	16026.7	27983.8
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	NAQDYQWIGLNDR	NAQDYQWIGLNDR	2	NAQDYQWIGLNDR2	11414.4	13298.7	12777.6
Q5XHY5	Q5XHY5;A0A8I6AAW1	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	0	NAQLAQYNFILVVGEK	NAQLAQYNFILVVGEK	2	NAQLAQYNFILVVGEK2	2129.97	4826.19	3195.36
Q5U2R0	Q5U2R0	MAT2B_RAT	Mat2b	Methionine adenosyltransferase 2 subunit beta	1	NAQLDCSK	NAQLDC(UniMod:4)SK	1	NAQLDC(UniMod:4)SK1			950.507
Q80Z29	Q80Z29	NAMPT_RAT	Nampt	Nicotinamide phosphoribosyltransferase	1	NAQLNMEQDVAPH	NAQLNMEQDVAPH	2	NAQLNMEQDVAPH2	3814.75	2063.39	1097.33
A0A8I6GJS5	A0A8I6GJS5	A0A8I6GJS5_RAT	LOC100362814	RIKEN cDNA D430041D05 gene	1	NAQTFIGIPR	NAQTFIGIPR	2	NAQTFIGIPR2	9149.55		16072.5
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	NAQVALTIWDVYGPGR	NAQVALTIWDVYGPGR	2	NAQVALTIWDVYGPGR2	2248.69	3908.62	
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	NAQVALTIWDVYGPGR	NAQVALTIWDVYGPGR	3	NAQVALTIWDVYGPGR3	2716.56		1164.35
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	NAQVAQSPVLLLGGAASTLLQK	NAQVAQSPVLLLGGAASTLLQK	3	NAQVAQSPVLLLGGAASTLLQK3	61140.2	62326.5	62971.2
Q6P7S1	Q6P7S1	ASAH1_RAT	Asah1	Acid ceramidase	1	NAQWVGFITR	NAQWVGFITR	2	NAQWVGFITR2	8439.26	8358.72	12087.8
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	NARGDEKENITAEALELSLK	NARGDEKENITAEALELSLK	4	NARGDEKENITAEALELSLK4	10391.5	20000.2	15459
Q4V8K3	Q4V8K3	NAA11_RAT	Naa11	N-alpha-acetyltransferase 11	1	NARPEDLMNMQHCNLLCLPENYQMK	NARPEDLMNMQHC(UniMod:4)NLLC(UniMod:4)LPENYQMK	4	NARPEDLMNMQHC(UniMod:4)NLLC(UniMod:4)LPENYQMK4	24497.3	14286.2	25816.2
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	NASAYCLMYINDK	NASAYC(UniMod:4)LMYINDK	2	NASAYC(UniMod:4)LMYINDK2	3901.4	1566.22	1534.07
Q4QR85	Q4QR85	MEP50_RAT	Wdr77	Methylosome protein WDR77	1	NASCTLSSAVHSQCVTR	NASC(UniMod:4)TLSSAVHSQC(UniMod:4)VTR	2	NASC(UniMod:4)TLSSAVHSQC(UniMod:4)VTR2	3254.54	2345.62	
Q4QR85	Q4QR85	MEP50_RAT	Wdr77	Methylosome protein WDR77	1	NASCTLSSAVHSQCVTR	NASC(UniMod:4)TLSSAVHSQC(UniMod:4)VTR	3	NASC(UniMod:4)TLSSAVHSQC(UniMod:4)VTR3	11954.2	18169.8	18018.8
P35435	P35435	ATPG_RAT	Atp5f1c	ATP synthase subunit gamma, mitochondrial	1	NASDMIDK	NASDMIDK	1	NASDMIDK1	4833.2	1568.64	4549.99
P35435	P35435	ATPG_RAT	Atp5f1c	ATP synthase subunit gamma, mitochondrial	1	NASDMIDK	NASDMIDK	2	NASDMIDK2	414229	451695	447533
P35435	P35435	ATPG_RAT	Atp5f1c	ATP synthase subunit gamma, mitochondrial	1	NASDMIDKLTLTFNR	NASDMIDKLTLTFNR	2	NASDMIDKLTLTFNR2	1699.06	6108.18	
P35435	P35435	ATPG_RAT	Atp5f1c	ATP synthase subunit gamma, mitochondrial	1	NASDMIDKLTLTFNR	NASDMIDKLTLTFNR	3	NASDMIDKLTLTFNR3		2755.02	8523.32
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	NASELFPAVVK	NASELFPAVVK	2	NASELFPAVVK2	164112	260777	213355
A0A8I6AAR9	A0A8I6AAR9	A0A8I6AAR9_RAT	Ankrd17	Ankyrin repeat domain 17	1	NASILLEELDLEK	NASILLEELDLEK	2	NASILLEELDLEK2	3777.54		2644.29
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	NASLASSNNDLQVAEEQYQR	NASLASSNNDLQVAEEQYQR	3	NASLASSNNDLQVAEEQYQR3		20108.5	23749.3
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	NASLIRPLGEGGK	NASLIRPLGEGGK	3	NASLIRPLGEGGK3	23681.2	18309.5	35716.3
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	NASLWEYEVYK	NASLWEYEVYK	2	NASLWEYEVYK2	10826.2	11181.2	12886.6
A0A8I5ZQU7	A0A8I5ZQU7	A0A8I5ZQU7_RAT	Casp7	Caspase 7	1	NASMCPVSTTR	NASMC(UniMod:4)PVSTTR	2	NASMC(UniMod:4)PVSTTR2	5103.48	14377	5655.31
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	NASMTSFTK	NASMTSFTK	2	NASMTSFTK2	160420	190588	164670
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	NASMVQSQEAPK	NASMVQSQEAPK	2	NASMVQSQEAPK2	52099	44043.4	64533.8
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	NASMVQSQEAPKQEAPAK	NASMVQSQEAPKQEAPAK	3	NASMVQSQEAPKQEAPAK3	2293.68		1997.48
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	NASNDIVR	NASNDIVR	2	NASNDIVR2	147053	168970	156433
A0A8J8YPH6	A0A8J8YPH6	A0A8J8YPH6_RAT	Hps4	HPS4, biogenesis of lysosomal organelles complex 3 subunit 2	1	NASTAVYACSNPAQETYFQQLAPTAR	NASTAVYAC(UniMod:4)SNPAQETYFQQLAPTAR	3	NASTAVYAC(UniMod:4)SNPAQETYFQQLAPTAR3	24987.3	24868.4	21528.9
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	NASTFEEVVQVPSAYQK	NASTFEEVVQVPSAYQK	2	NASTFEEVVQVPSAYQK2	595518	592388	615376
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	NASTFEEVVQVPSAYQK	NASTFEEVVQVPSAYQK	3	NASTFEEVVQVPSAYQK3	176369	186553	187258
A0A0G2K264	A0A0G2K264	A0A0G2K264_RAT	Dap3	Death associated protein 3	1	NATDAVGVVLK	NATDAVGVVLK	2	NATDAVGVVLK2	2519.7		2188.8
A0A8I6AE36	A0A8I6AE36	A0A8I6AE36_RAT	ENSRNOG00000067472	Peroxisomal biogenesis factor 19	1	NATDLQNAGMSEEELTK	NATDLQNAGMSEEELTK	2	NATDLQNAGMSEEELTK2	14252.6	15062.4	6003.6
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	NATFTWAR	NATFTWAR	2	NATFTWAR2	14440.1	39101.5	36690.7
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	NATGPRPALFVPEVSFELLVK	NATGPRPALFVPEVSFELLVK	3	NATGPRPALFVPEVSFELLVK3	10428.8	11883.1	11071.2
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	NATLLFPESIR	NATLLFPESIR	2	NATLLFPESIR2	53200.5	51549.3	43882.5
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	NATLSHMSDNR	NATLSHMSDNR	2	NATLSHMSDNR2	1853.68	4819.59	5163.09
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	NATLSHMSDNR	NATLSHMSDNR	3	NATLSHMSDNR3	13461.2	9435.68	27229.6
P10536	P10536	RAB1B_RAT	Rab1b	Ras-related protein Rab-1B	1	NATNVEQAFMTMAAEIK	NATNVEQAFMTMAAEIK	2	NATNVEQAFMTMAAEIK2	234986	215127	301881
P10536	P10536	RAB1B_RAT	Rab1b	Ras-related protein Rab-1B	1	NATNVEQAFMTMAAEIK	NATNVEQAFMTMAAEIK	3	NATNVEQAFMTMAAEIK3	180296	198061	236530
P10536	P10536	RAB1B_RAT	Rab1b	Ras-related protein Rab-1B	1	NATNVEQAFMTMAAEIKK	NATNVEQAFMTMAAEIKK	3	NATNVEQAFMTMAAEIKK3	33289.7	33507.9	52760
Q6NYB7	Q6NYB7	RAB1A_RAT	Rab1A	Ras-related protein Rab-1A	1	NATNVEQSFMTMAAEIK	NATNVEQSFMTMAAEIK	2	NATNVEQSFMTMAAEIK2	134412	131053	163759
Q6NYB7	Q6NYB7	RAB1A_RAT	Rab1A	Ras-related protein Rab-1A	1	NATNVEQSFMTMAAEIK	NATNVEQSFMTMAAEIK	3	NATNVEQSFMTMAAEIK3	69674.1	84303	73930.6
Q6NYB7	Q6NYB7	RAB1A_RAT	Rab1A	Ras-related protein Rab-1A	1	NATNVEQSFMTMAAEIKK	NATNVEQSFMTMAAEIKK	3	NATNVEQSFMTMAAEIKK3	85088.2	75080.1	78731.8
P69478	P69478	CHSTB_RAT	Chst11	Carbohydrate sulfotransferase 11	1	NATQEALR	NATQEALR	2	NATQEALR2	3855.28		
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	NATQEAVAALLK	NATQEAVAALLK	2	NATQEAVAALLK2	10817.9	7786.37	9766.11
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	NATSPQVQR	NATSPQVQR	2	NATSPQVQR2	24232.5		15851.4
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	NATSPQVQRPSFMDYFDK	NATSPQVQRPSFMDYFDK	3	NATSPQVQRPSFMDYFDK3	84856.2	73869.6	78698.5
Q63468	Q63468	KPRA_RAT	Prpsap1	Phosphoribosyl pyrophosphate synthase-associated protein 1	1	NATVHPGLELPLMMAK	NATVHPGLELPLMMAK	3	NATVHPGLELPLMMAK3	16841.7	6179.45	11048.4
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	NAVAAFLLMLR	NAVAAFLLMLR	2	NAVAAFLLMLR2	46859.1	43426.8	31396.3
Q8VIL3	Q8VIL3	ZWINT_RAT	Zwint	ZW10 interactor	1	NAVAEENAVAEENAVADK	NAVAEENAVAEENAVADK	2	NAVAEENAVAEENAVADK2	6952.94	18158	11575.3
Q8VIL3	Q8VIL3	ZWINT_RAT	Zwint	ZW10 interactor	1	NAVAEENAVAEENAVADK	NAVAEENAVAEENAVADK	3	NAVAEENAVAEENAVADK3	7990.32	9947.45	11738.2
P84092	A0A8I6AUZ2;P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	0	NAVDAFR	NAVDAFR	2	NAVDAFR2	125437	117024	110681
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	NAVEECVYEFR	NAVEEC(UniMod:4)VYEFR	2	NAVEEC(UniMod:4)VYEFR2	64394.8	55569.6	58773.4
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	NAVEECVYEFR	NAVEEC(UniMod:4)VYEFR	3	NAVEEC(UniMod:4)VYEFR3	6289.32	5897.38	8204.35
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	NAVEEYVYEMR	NAVEEYVYEMR	2	NAVEEYVYEMR2	637576	712256	710035
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	NAVEEYVYEMR	NAVEEYVYEMR	3	NAVEEYVYEMR3	76564.2	95071.3	85143
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	NAVEIYAWAPK	NAVEIYAWAPK	2	NAVEIYAWAPK2	37082	24479.9	25186.3
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	NAVEIYAWAPKPYHK	NAVEIYAWAPKPYHK	3	NAVEIYAWAPKPYHK3	8354.27	7768.04	9073.5
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	NAVEIYAWAPKPYHK	NAVEIYAWAPKPYHK	4	NAVEIYAWAPKPYHK4	21394	24399.5	17399.8
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	NAVESYTYNIK	NAVESYTYNIK	2	NAVESYTYNIK2	61264.3	89741.6	101274
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	NAVFQLEK	NAVFQLEK	2	NAVFQLEK2	41341.7	63185.2	61900.2
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	NAVFTQVYEGLKPSDK	NAVFTQVYEGLKPSDK	3	NAVFTQVYEGLKPSDK3	64213.1	59883.8	65439.7
F1M943	F1M943	F1M943_RAT	Armc8	Armadillo repeat-containing protein 8	1	NAVIGNNK	NAVIGNNK	2	NAVIGNNK2		15997.8	
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	NAVIIQSFIR	NAVIIQSFIR	2	NAVIIQSFIR2	87948.2	103860	84398
Q5U2U0	Q5U2U0	CLPX_RAT	Clpx	ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial	1	NAVIPQYQALFSMDK	NAVIPQYQALFSMDK	2	NAVIPQYQALFSMDK2	8333.88	8300.55	6830.75
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	NAVIQYPSPSALGLLQSELEK	NAVIQYPSPSALGLLQSELEK	3	NAVIQYPSPSALGLLQSELEK3	48070.1	58235.9	85793.3
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	NAVITVPAYFNDSQR	NAVITVPAYFNDSQR	2	NAVITVPAYFNDSQR2	209540	171704	185674
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	NAVITVPAYFNDSQR	NAVITVPAYFNDSQR	3	NAVITVPAYFNDSQR3	11736.6	8758.03	16401
A0A8I6A356	A0A8I6A356	A0A8I6A356_RAT	Ube2k	E2 ubiquitin-conjugating enzyme	1	NAVIVALSSK	NAVIVALSSK	2	NAVIVALSSK2	18062.7	21369.4	18325.5
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	NAVLAIYTIYR	NAVLAIYTIYR	2	NAVLAIYTIYR2	166933	183099	175150
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	NAVLFEAISLIIHHDSEPNLLVR	NAVLFEAISLIIHHDSEPNLLVR	4	NAVLFEAISLIIHHDSEPNLLVR4	5151.53		
Q5XIA1	Q5XIA1	NCLN_RAT	Ncln	BOS complex subunit NCLN	1	NAVLNTEAR	NAVLNTEAR	2	NAVLNTEAR2	88415.8	87796	82451.8
D3ZF19	D3ZF19	D3ZF19_RAT	Tmem68	Transmembrane protein 68	1	NAVQALIDK	NAVQALIDK	2	NAVQALIDK2	15062.1	7761.97	14459.2
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	NAVSMYCR	NAVSMYC(UniMod:4)R	2	NAVSMYC(UniMod:4)R2	26706.3	15400.2	19943.4
A0A8I6G419	A0A8I6G419	A0A8I6G419_RAT	Sfxn2	Sidoreflexin	1	NAVSPTSVR	NAVSPTSVR	2	NAVSPTSVR2	3999.99	4042.64	4494.41
P20788	P20788	UCRI_RAT	Uqcrfs1	Cytochrome b-c1 complex subunit Rieske, mitochondrial	1	NAVSQFVSSMSASADVLAMSK	NAVSQFVSSMSASADVLAMSK	3	NAVSQFVSSMSASADVLAMSK3	35001.5	44977	49232.6
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	NAVTQEFGPVPDTAR	NAVTQEFGPVPDTAR	2	NAVTQEFGPVPDTAR2	217776	211107	250135
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	NAVTQEFGPVPDTAR	NAVTQEFGPVPDTAR	3	NAVTQEFGPVPDTAR3	61768.8	56203.5	65033.8
A0A8I5ZKS4	A0A8I5ZKS4	A0A8I5ZKS4_RAT	Hycc1	Family with sequence similarity 126, member A	1	NAVTSMSIR	NAVTSMSIR	2	NAVTSMSIR2	43413.9	35425.9	27634.4
A0A8I6A282	A0A8I6A282	A0A8I6A282_RAT	Antxr2	Anthrax toxin receptor	1	NAVVMIPEEEIPVPSRPPR	NAVVMIPEEEIPVPSRPPR	3	NAVVMIPEEEIPVPSRPPR3	29088.8	36312	25667.4
A0A8I6A282	A0A8I6A282	A0A8I6A282_RAT	Antxr2	Anthrax toxin receptor	1	NAVVMIPEEEIPVPSRPPRPK	NAVVMIPEEEIPVPSRPPRPK	3	NAVVMIPEEEIPVPSRPPRPK3	13930.9	10159.3	15793.5
A0A8I6A282	A0A8I6A282	A0A8I6A282_RAT	Antxr2	Anthrax toxin receptor	1	NAVVMIPEEEIPVPSRPPRPK	NAVVMIPEEEIPVPSRPPRPK	4	NAVVMIPEEEIPVPSRPPRPK4	31907.7	36806.9	25571.8
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	NAVVQGLEQPHGLVVHPLR	NAVVQGLEQPHGLVVHPLR	3	NAVVQGLEQPHGLVVHPLR3	102476	125092	96517.3
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	NAVVQGLEQPHGLVVHPLR	NAVVQGLEQPHGLVVHPLR	4	NAVVQGLEQPHGLVVHPLR4	315038	392310	343806
P83953	Q56R16;P83953;A0A0G2JZS1	IMA5_RAT	Kpna1	Importin subunit alpha-5	0	NAVWALSNLCR	NAVWALSNLC(UniMod:4)R	2	NAVWALSNLC(UniMod:4)R2	212875	207785	209786
A0A8I6AAD8	A0A8I6AAD8	A0A8I6AAD8_RAT	Snx4	Sorting nexin 4	1	NAWADIER	NAWADIER	2	NAWADIER2	19696.6	13637.4	22176.4
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	NAWADNANACAK	NAWADNANAC(UniMod:4)AK	2	NAWADNANAC(UniMod:4)AK2	183818	223489	242647
A0A0G2JY11	A0A0G2JY11	A0A0G2JY11_RAT	Tspan9	Tetraspanin	1	NAWNIIQAEMR	NAWNIIQAEMR	2	NAWNIIQAEMR2	495929	525189	514262
A0A0G2JY11	A0A0G2JY11	A0A0G2JY11_RAT	Tspan9	Tetraspanin	1	NAWNIIQAEMR	NAWNIIQAEMR	3	NAWNIIQAEMR3	39782.9	43020.7	46575.3
D3ZA88	D3ZA88	D3ZA88_RAT	Trim34	Tripartite motif-containing 34	1	NAWTLGVYSR	NAWTLGVYSR	2	NAWTLGVYSR2	3766.82	5506.93	1722.2
Q63797	Q63797	PSME1_RAT	Psme1	Proteasome activator complex subunit 1	1	NAYAVLYDIILK	NAYAVLYDIILK	2	NAYAVLYDIILK2	5995.27	2611.85	5890.12
A0A0G2K0J8	A0A0G2K0J8;A0A8I6AP01	A0A0G2K0J8_RAT	Ints6l	Integrator complex subunit 6 like	0	NAYDIPR	NAYDIPR	2	NAYDIPR2	44757.8	27945	54131.8
Q29RW1	Q29RW1	MYH4_RAT	Myh4	Myosin-4	1	NAYEESLDQLETLK	NAYEESLDQLETLK	2	NAYEESLDQLETLK2	3359.51	3549.44	4940.87
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	NAYHAVYK	NAYHAVYK	1	NAYHAVYK1	3219.97	6718.32	4543.77
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	NAYHAVYK	NAYHAVYK	2	NAYHAVYK2	25239.1	43677.2	36023.2
G3V6N7	G3V6N7	G3V6N7_RAT	Slc12a6	Solute carrier family 12, member 6	1	NAYLNNSNYEEGDEYFDK	NAYLNNSNYEEGDEYFDK	3	NAYLNNSNYEEGDEYFDK3	1075.03		4135.45
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	NAYLSLEEK	NAYLSLEEK	2	NAYLSLEEK2	1.72063e+06	1.7337e+06	1.8469e+06
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	NAYNQGLECNHGDEEGGDDGVSPK	NAYNQGLEC(UniMod:4)NHGDEEGGDDGVSPK	3	NAYNQGLEC(UniMod:4)NHGDEEGGDDGVSPK3	13658.8	16836.2	17867.2
A0A8I5ZRG3	A0A8I5ZRG3	A0A8I5ZRG3_RAT	Frmd4b	FERM domain containing 4B	1	NAYSSSHLEPDSSSQHCR	NAYSSSHLEPDSSSQHC(UniMod:4)R	3	NAYSSSHLEPDSSSQHC(UniMod:4)R3	3990.2	4882.72	7089.76
A0A8I5ZRG3	A0A8I5ZRG3	A0A8I5ZRG3_RAT	Frmd4b	FERM domain containing 4B	1	NAYSSSHLEPDSSSQHCR	NAYSSSHLEPDSSSQHC(UniMod:4)R	4	NAYSSSHLEPDSSSQHC(UniMod:4)R4		8370.93	6066.57
D4A533	D4A533	D4A533_RAT	Tapt1	Transmembrane anterior posterior transformation 1	1	NAYTDYSDSVAR	NAYTDYSDSVAR	2	NAYTDYSDSVAR2	17371.4	33232	23615.5
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	NAYTMVLHK	NAYTMVLHK	2	NAYTMVLHK2	5654.79	10809.4	11930.8
Q32KJ6	Q32KJ6	GALNS_RAT	Galns	N-acetylgalactosamine-6-sulfatase	1	NAYTPQEIMGGIPNSEHLLPELLK	NAYTPQEIMGGIPNSEHLLPELLK	3	NAYTPQEIMGGIPNSEHLLPELLK3	24583.9	21101	27233.2
Q32KJ6	Q32KJ6	GALNS_RAT	Galns	N-acetylgalactosamine-6-sulfatase	1	NAYTPQEIMGGIPNSEHLLPELLKK	NAYTPQEIMGGIPNSEHLLPELLKK	4	NAYTPQEIMGGIPNSEHLLPELLKK4	45301	29283.2	21622.1
Q99PD4	Q99PD4	ARC1A_RAT	Arpc1a	Actin-related protein 2/3 complex subunit 1A	1	NAYVWSQK	NAYVWSQK	2	NAYVWSQK2	49540.9	66184.8	61430.7
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	NAYVWTLK	NAYVWTLK	2	NAYVWTLK2	508002	482453	492900
Q9WTS8	Q9WTS8	FCN1_RAT	Fcn1	Ficolin-1	1	NCAALFHGAWWYHDCHQSNLNGR	NC(UniMod:4)AALFHGAWWYHDC(UniMod:4)HQSNLNGR	4	NC(UniMod:4)AALFHGAWWYHDC(UniMod:4)HQSNLNGR4	5455.32	2284.24	976.484
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	NCAASGSDPTDLNSPLLFGR	NC(UniMod:4)AASGSDPTDLNSPLLFGR	3	NC(UniMod:4)AASGSDPTDLNSPLLFGR3	3746.81	3785.69	
Q9JLT0	F1LNF0;Q63862;Q9JLT0	MYH10_RAT	Myh10	Myosin-10	0	NCAAYLK	NC(UniMod:4)AAYLK	2	NC(UniMod:4)AAYLK2	3031.43	3784.38	4040.18
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	NCAAYLR	NC(UniMod:4)AAYLR	1	NC(UniMod:4)AAYLR1	25162.1	23352.1	23883.6
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	NCAAYLR	NC(UniMod:4)AAYLR	2	NC(UniMod:4)AAYLR2	8.79341e+06	1.11749e+07	1.04193e+07
P31399	P31399	ATP5H_RAT	Atp5pd	ATP synthase subunit d, mitochondrial	1	NCAQFVTGSQAR	NC(UniMod:4)AQFVTGSQAR	2	NC(UniMod:4)AQFVTGSQAR2	437559	416748	441795
P31399	P31399	ATP5H_RAT	Atp5pd	ATP synthase subunit d, mitochondrial	1	NCAQFVTGSQAR	NC(UniMod:4)AQFVTGSQAR	3	NC(UniMod:4)AQFVTGSQAR3	52077.7	48279.4	81834.8
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	NCAQGEGSMAK	NC(UniMod:4)AQGEGSMAK	2	NC(UniMod:4)AQGEGSMAK2	286643		151708
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	NCAQYFSLFNTFVQK	NC(UniMod:4)AQYFSLFNTFVQK	2	NC(UniMod:4)AQYFSLFNTFVQK2	1460.12	6412.38	11756.3
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	NCAQYFSLFNTFVQK	NC(UniMod:4)AQYFSLFNTFVQK	3	NC(UniMod:4)AQYFSLFNTFVQK3	4563.98	5040.97	11528.4
A0A8I6ANI3	A0A8I6ANI3	A0A8I6ANI3_RAT	Ctla2a	Cytotoxic T lymphocyte-associated protein 2 alpha	1	NCCGSLMCR	NC(UniMod:4)C(UniMod:4)GSLMC(UniMod:4)R	2	NC(UniMod:4)C(UniMod:4)GSLMC(UniMod:4)R2	122991	125111	111186
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	NCDGVPALVR	NC(UniMod:4)DGVPALVR	2	NC(UniMod:4)DGVPALVR2	16586.6	26671.4	25005.6
P11348	P11348	DHPR_RAT	Qdpr	Dihydropteridine reductase	1	NCDLMWK	NC(UniMod:4)DLMWK	2	NC(UniMod:4)DLMWK2	17207.4	14701.1	16310
A0A0G2K427	A0A0G2K427	A0A0G2K427_RAT	Ivns1abp	Influenza virus NS1A binding protein	1	NCDVFDPVTK	NC(UniMod:4)DVFDPVTK	2	NC(UniMod:4)DVFDPVTK2	8415.06	6917.84	5688.01
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	NCECQTQGR	NC(UniMod:4)EC(UniMod:4)QTQGR	2	NC(UniMod:4)EC(UniMod:4)QTQGR2			9329.35
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	NCEDMDECSIR	NC(UniMod:4)EDMDEC(UniMod:4)SIR	2	NC(UniMod:4)EDMDEC(UniMod:4)SIR2	52152.5	55232.3	53410.5
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	NCEENDYTTWLAHSTDPGDYK	NC(UniMod:4)EENDYTTWLAHSTDPGDYK	3	NC(UniMod:4)EENDYTTWLAHSTDPGDYK3	66689.9	82779.5	52016
A0A8I5XVA3	A0A8I5XVA3	A0A8I5XVA3_RAT	Tnn	Tenascin N	1	NCELADSVQDLLAR	NC(UniMod:4)ELADSVQDLLAR	2	NC(UniMod:4)ELADSVQDLLAR2	2300.44		
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	NCELDATCSIK	NC(UniMod:4)ELDATC(UniMod:4)SIK	2	NC(UniMod:4)ELDATC(UniMod:4)SIK2	68078.6	59697.6	66005
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	NCELDATCSIK	NC(UniMod:4)ELDATC(UniMod:4)SIK	3	NC(UniMod:4)ELDATC(UniMod:4)SIK3		3796.33	2587.63
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	NCELDATCSIKNGR	NC(UniMod:4)ELDATC(UniMod:4)SIKNGR	2	NC(UniMod:4)ELDATC(UniMod:4)SIKNGR2		1689.8	3240.37
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	NCELDATCSIKNGR	NC(UniMod:4)ELDATC(UniMod:4)SIKNGR	3	NC(UniMod:4)ELDATC(UniMod:4)SIKNGR3	42536.3	89904.3	39109.4
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	NCELFVR	NC(UniMod:4)ELFVR	1	NC(UniMod:4)ELFVR1	63330.7	63924.2	65109.8
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	NCELFVR	NC(UniMod:4)ELFVR	2	NC(UniMod:4)ELFVR2	112096	151481	121241
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	NCELFVRK	NC(UniMod:4)ELFVRK	2	NC(UniMod:4)ELFVRK2	26351.2	21133.2	28920.4
Q5I0K8	Q5I0K8	RT07_RAT	Mrps7	Small ribosomal subunit protein uS7m	1	NCEPVIGLVPILK	NC(UniMod:4)EPVIGLVPILK	2	NC(UniMod:4)EPVIGLVPILK2	2828.5	3301.21	3336.17
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	NCEQCKPFYFQHPER	NC(UniMod:4)EQC(UniMod:4)KPFYFQHPER	3	NC(UniMod:4)EQC(UniMod:4)KPFYFQHPER3	16350.4	9339.63	6327.37
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	NCEQCKPFYFQHPER	NC(UniMod:4)EQC(UniMod:4)KPFYFQHPER	4	NC(UniMod:4)EQC(UniMod:4)KPFYFQHPER4	68883.6	98611.8	59664.8
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	NCESVCCADSSLASFQDPEPK	NC(UniMod:4)ESVC(UniMod:4)C(UniMod:4)ADSSLASFQDPEPK	3	NC(UniMod:4)ESVC(UniMod:4)C(UniMod:4)ADSSLASFQDPEPK3	14728.5	14462.1	26473.5
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	NCETDTLINYMAK	NC(UniMod:4)ETDTLINYMAK	2	NC(UniMod:4)ETDTLINYMAK2	5643.57	4597.42	2649.5
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	NCFASVFEK	NC(UniMod:4)FASVFEK	2	NC(UniMod:4)FASVFEK2	264040	247624	246570
Q8CHM7	Q8CHM7	HACL1_RAT	Hacl1	2-hydroxyacyl-CoA lyase 1	1	NCFIVSEGANTMDIGR	NC(UniMod:4)FIVSEGANTMDIGR	2	NC(UniMod:4)FIVSEGANTMDIGR2	5378.72	3294.01	5558.82
Q8CHM7	Q8CHM7	HACL1_RAT	Hacl1	2-hydroxyacyl-CoA lyase 1	1	NCFIVSEGANTMDIGR	NC(UniMod:4)FIVSEGANTMDIGR	3	NC(UniMod:4)FIVSEGANTMDIGR3		3708.81	
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	NCFLCATVTTERPVQVK	NC(UniMod:4)FLC(UniMod:4)ATVTTERPVQVK	3	NC(UniMod:4)FLC(UniMod:4)ATVTTERPVQVK3	45439	34963.6	43015.5
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	NCGADHICQDDLGIIFGFPDLK	NC(UniMod:4)GADHIC(UniMod:4)QDDLGIIFGFPDLK	3	NC(UniMod:4)GADHIC(UniMod:4)QDDLGIIFGFPDLK3	30411.1	37783.1	31532.4
A0A0G2K264	A0A0G2K264	A0A0G2K264_RAT	Dap3	Death associated protein 3	1	NCGELLQSTYNK	NC(UniMod:4)GELLQSTYNK	2	NC(UniMod:4)GELLQSTYNK2	2670.03	3245.02	4411.21
P20759	P20759	IGHG1_RAT		Ig gamma-1 chain C region	1	NCGGDCKPCICTGSEVSSVFIFPPKPK	NC(UniMod:4)GGDC(UniMod:4)KPC(UniMod:4)IC(UniMod:4)TGSEVSSVFIFPPKPK	4	NC(UniMod:4)GGDC(UniMod:4)KPC(UniMod:4)IC(UniMod:4)TGSEVSSVFIFPPKPK4	305173	270060	253370
F1LR42	F1LR42	F1LR42_RAT	Rufy1	RUN and FYVE domain containing 1	1	NCGHIFCNTCSSNELALPSYPKPVR	NC(UniMod:4)GHIFC(UniMod:4)NTC(UniMod:4)SSNELALPSYPKPVR	4	NC(UniMod:4)GHIFC(UniMod:4)NTC(UniMod:4)SSNELALPSYPKPVR4	9094.7	6292.69	9718.44
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	NCGLFDLR	NC(UniMod:4)GLFDLR	2	NC(UniMod:4)GLFDLR2	27399.3	5.29344e+06	4.7273e+06
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	NCGLFDLRR	NC(UniMod:4)GLFDLRR	2	NC(UniMod:4)GLFDLRR2	7276.57	5070.47	2573.03
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	NCGLFDLRR	NC(UniMod:4)GLFDLRR	3	NC(UniMod:4)GLFDLRR3	47823.4	132127	140076
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	NCGNVFCSSCCNQK	NC(UniMod:4)GNVFC(UniMod:4)SSC(UniMod:4)C(UniMod:4)NQK	2	NC(UniMod:4)GNVFC(UniMod:4)SSC(UniMod:4)C(UniMod:4)NQK2	10493.9	4190.62	6629.36
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	NCGPELQVTNIDK	NC(UniMod:4)GPELQVTNIDK	2	NC(UniMod:4)GPELQVTNIDK2	7743.54	5281.91	13137.3
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	NCGQMSEIEAK	NC(UniMod:4)GQMSEIEAK	2	NC(UniMod:4)GQMSEIEAK2	2.3079e+06	2.3923e+06	2.47182e+06
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	NCGQTVHDEVANK	NC(UniMod:4)GQTVHDEVANK	2	NC(UniMod:4)GQTVHDEVANK2	1794.18		3626.24
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	NCGQTVHDEVANK	NC(UniMod:4)GQTVHDEVANK	3	NC(UniMod:4)GQTVHDEVANK3	36954.4	21574.6	36162.7
D3ZEJ9	D3ZEJ9	D3ZEJ9_RAT	RGD1310429	Similar to Protein Njmu-R1	1	NCGSGDILLK	NC(UniMod:4)GSGDILLK	2	NC(UniMod:4)GSGDILLK2	9170.61	10048	14195.5
O35760	O35760	IDI1_RAT	Idi1	Isopentenyl-diphosphate Delta-isomerase 1	1	NCHLNENIDK	NC(UniMod:4)HLNENIDK	3	NC(UniMod:4)HLNENIDK3	350.224	1458.51	2591.49
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	NCHYANLNGLYGSTVDHQGVSWYHWK	NC(UniMod:4)HYANLNGLYGSTVDHQGVSWYHWK	4	NC(UniMod:4)HYANLNGLYGSTVDHQGVSWYHWK4	14068	14491.1	9420.08
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	NCIDIDECLVNR	NC(UniMod:4)IDIDEC(UniMod:4)LVNR	2	NC(UniMod:4)IDIDEC(UniMod:4)LVNR2	5455.12	9648.46	3877.7
F7FPK8	F7FPK8	F7FPK8_RAT	Lman2	Lectin, mannose-binding 2	1	NCIDVTGVR	NC(UniMod:4)IDVTGVR	2	NC(UniMod:4)IDVTGVR2	136038	115745	111583
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	NCIEIVNK	NC(UniMod:4)IEIVNK	2	NC(UniMod:4)IEIVNK2	32787.1	40641.4	25876.7
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	NCIGDFLK	NC(UniMod:4)IGDFLK	2	NC(UniMod:4)IGDFLK2	354246	413775	337113
P09330	P09330	PRPS2_RAT	Prps2	Ribose-phosphate pyrophosphokinase 2	1	NCIIVSPDAGGAK	NC(UniMod:4)IIVSPDAGGAK	2	NC(UniMod:4)IIVSPDAGGAK2	10176.9	8201.49	7479.71
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	NCILDDK	NC(UniMod:4)ILDDK	2	NC(UniMod:4)ILDDK2			28828.5
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	NCILDDKRPHVMK	NC(UniMod:4)ILDDKRPHVMK	4	NC(UniMod:4)ILDDKRPHVMK4	14124.2	16057.1	21270.4
D3ZVN7	D3ZVN7	D3ZVN7_RAT	Ppox	Amine oxidase	1	NCIPQYTLGHWQK	NC(UniMod:4)IPQYTLGHWQK	3	NC(UniMod:4)IPQYTLGHWQK3	11320.3		8506.56
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	NCIQLMK	NC(UniMod:4)IQLMK	2	NC(UniMod:4)IQLMK2	39493.6	39933.2	44976
P62243	Q6TXJ0;P62243;M0R7Q5	RS8_RAT	Rps8	Small ribosomal subunit protein eS8	0	NCIVLIDSTPYR	NC(UniMod:4)IVLIDSTPYR	2	NC(UniMod:4)IVLIDSTPYR2	20651	19145.9	16215.5
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	NCIWQLVAPTQYR	NC(UniMod:4)IWQLVAPTQYR	2	NC(UniMod:4)IWQLVAPTQYR2	37909	32294.8	37238.1
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	NCIWQLVAPTQYR	NC(UniMod:4)IWQLVAPTQYR	3	NC(UniMod:4)IWQLVAPTQYR3	5519.42	10240.3	9404.14
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	NCLECQQHSQLK	NC(UniMod:4)LEC(UniMod:4)QQHSQLK	3	NC(UniMod:4)LEC(UniMod:4)QQHSQLK3	17065.9	24276.4	21319.5
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	NCLIELVNCQMVLR	NC(UniMod:4)LIELVNC(UniMod:4)QMVLR	2	NC(UniMod:4)LIELVNC(UniMod:4)QMVLR2	4892.86	6159.23	6417.18
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	NCLLASYVHYVFR	NC(UniMod:4)LLASYVHYVFR	2	NC(UniMod:4)LLASYVHYVFR2	15992.9	19005.5	15514.9
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	NCLLASYVHYVFR	NC(UniMod:4)LLASYVHYVFR	3	NC(UniMod:4)LLASYVHYVFR3	27201.1	36793.2	38397.5
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	NCLLETAK	NC(UniMod:4)LLETAK	1	NC(UniMod:4)LLETAK1	1687.2		1775.97
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	NCLLETAK	NC(UniMod:4)LLETAK	2	NC(UniMod:4)LLETAK2	151537	177221	197952
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	NCLLQHK	NC(UniMod:4)LLQHK	2	NC(UniMod:4)LLQHK2	3632.9		
E9PU02	E9PU02	E9PU02_RAT	Trappc9	Trafficking protein particle complex subunit 9	1	NCLSPEDIIDKYK	NC(UniMod:4)LSPEDIIDKYK	3	NC(UniMod:4)LSPEDIIDKYK3	8791.59	7147.23	
P49242	P49242;A0A8I6ABN0;M0R6L4	RS3A_RAT	Rps3a	Small ribosomal subunit protein eS1	0	NCLTNFHGMDLTR	NC(UniMod:4)LTNFHGMDLTR	3	NC(UniMod:4)LTNFHGMDLTR3	29430.4	29546.2	26018.9
P09760	P09760	FER_RAT	Fer	Tyrosine-protein kinase Fer	1	NCLVGENNTLK	NC(UniMod:4)LVGENNTLK	2	NC(UniMod:4)LVGENNTLK2	11532.8	13165.5	14631.2
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	NCLVNDQGVVK	NC(UniMod:4)LVNDQGVVK	2	NC(UniMod:4)LVNDQGVVK2	100488	81492.5	86035.1
D4A584	D4A584	D4A584_RAT	Fes	Tyrosine-protein kinase	1	NCLVTEK	NC(UniMod:4)LVTEK	2	NC(UniMod:4)LVTEK2	4993.38	7830.95	
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	NCLVYSIPTNSSK	NC(UniMod:4)LVYSIPTNSSK	2	NC(UniMod:4)LVYSIPTNSSK2	8156.19	8626.71	4699.47
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	NCMDIDECQR	NC(UniMod:4)MDIDEC(UniMod:4)QR	2	NC(UniMod:4)MDIDEC(UniMod:4)QR2	2483.77	5741.74	3435.78
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	NCMDIDECQRDPLLCR	NC(UniMod:4)MDIDEC(UniMod:4)QRDPLLC(UniMod:4)R	3	NC(UniMod:4)MDIDEC(UniMod:4)QRDPLLC(UniMod:4)R3	105556	136437	115511
B2RZ37	B2RZ37	REEP5_RAT	Reep5	Receptor expression-enhancing protein 5	1	NCMTDLLAK	NC(UniMod:4)MTDLLAK	2	NC(UniMod:4)MTDLLAK2	271460	289264	247493
P24062	P24062	IGF1R_RAT	Igf1r	Insulin-like growth factor 1 receptor	1	NCMVAEDFTVK	NC(UniMod:4)MVAEDFTVK	2	NC(UniMod:4)MVAEDFTVK2	5370.27	8201.41	
P15127	P15127	INSR_RAT	Insr	Insulin receptor	1	NCMVAHDFTVK	NC(UniMod:4)MVAHDFTVK	3	NC(UniMod:4)MVAHDFTVK3	5298.34	3865.11	6123.04
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	NCNDFQYESK	NC(UniMod:4)NDFQYESK	2	NC(UniMod:4)NDFQYESK2	1.45068e+06	1.41292e+06	1.52505e+06
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	NCNGVVMMFDITK	NC(UniMod:4)NGVVMMFDITK	2	NC(UniMod:4)NGVVMMFDITK2		5316.97	5452.76
Q5XIT6	Q5XIT6	DESI2_RAT	Desi2	Deubiquitinase DESI2	1	NCNHFSSALSEILCGK	NC(UniMod:4)NHFSSALSEILC(UniMod:4)GK	3	NC(UniMod:4)NHFSSALSEILC(UniMod:4)GK3	2586.33	2045.98	3689.26
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	NCPAHWLAQDWER	NC(UniMod:4)PAHWLAQDWER	2	NC(UniMod:4)PAHWLAQDWER2	32165.3	52894.3	58404.5
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	NCPAHWLAQDWER	NC(UniMod:4)PAHWLAQDWER	3	NC(UniMod:4)PAHWLAQDWER3	141147	182170	114189
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	NCPEGAAVCAVDK	NC(UniMod:4)PEGAAVC(UniMod:4)AVDK	2	NC(UniMod:4)PEGAAVC(UniMod:4)AVDK2	79644.9	95830.2	85301.3
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	NCPISAK	NC(UniMod:4)PISAK	2	NC(UniMod:4)PISAK2		114397	
Q5PQQ8	Q5PQQ8	ITGBL_RAT	Itgbl1	Integrin beta-like protein 1	1	NCPLSAEESTR	NC(UniMod:4)PLSAEESTR	2	NC(UniMod:4)PLSAEESTR2	38970.4	50572.1	39691.8
Q5PQQ8	Q5PQQ8	ITGBL_RAT	Itgbl1	Integrin beta-like protein 1	1	NCPLSAEESTRK	NC(UniMod:4)PLSAEESTRK	3	NC(UniMod:4)PLSAEESTRK3	49408.5	29217.5	51433.2
Q9Z1K9	Q9Z1K9	ADA17_RAT	Adam17	Disintegrin and metalloproteinase domain-containing protein 17	1	NCQFETAQK	NC(UniMod:4)QFETAQK	2	NC(UniMod:4)QFETAQK2	4942.82	3228.71	5247.06
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	NCQTLVNLCSPSPCK	NC(UniMod:4)QTLVNLC(UniMod:4)SPSPC(UniMod:4)K	2	NC(UniMod:4)QTLVNLC(UniMod:4)SPSPC(UniMod:4)K2	32561.7	43141.4	26419.4
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	NCQTVLAPCSPNPCENAAVCK	NC(UniMod:4)QTVLAPC(UniMod:4)SPNPC(UniMod:4)ENAAVC(UniMod:4)K	3	NC(UniMod:4)QTVLAPC(UniMod:4)SPNPC(UniMod:4)ENAAVC(UniMod:4)K3	25796.1	33646.7	28529.9
A0A8I5ZTL7	A0A8I5ZTL7;A0A8I6A6I4	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	0	NCSAVLCCR	NC(UniMod:4)SAVLC(UniMod:4)C(UniMod:4)R	2	NC(UniMod:4)SAVLC(UniMod:4)C(UniMod:4)R2	14277.7	12320.3	12867.2
P61983	P61983	1433G_RAT	Ywhag	14-3-3 protein gamma	1	NCSETQYESK	NC(UniMod:4)SETQYESK	2	NC(UniMod:4)SETQYESK2	11706.4		17290.8
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	NCSQLIAAYK	NC(UniMod:4)SQLIAAYK	2	NC(UniMod:4)SQLIAAYK2	6267.04	7151.92	12522.2
D3ZEI0	P17702;D3ZEI0;A0A0G2K8E0	D3ZEI0_RAT	AABR07016623.1	60S ribosomal protein L28	0	NCSSFLIK	NC(UniMod:4)SSFLIK	2	NC(UniMod:4)SSFLIK2	10813.9	12824	8727.29
D4A1R8	D4A1R8	CPNE1_RAT	Cpne1	Copine-1	1	NCSSPAFSK	NC(UniMod:4)SSPAFSK	2	NC(UniMod:4)SSPAFSK2	20161.5	19906.2	26318.9
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	NCSYLEASPSLEQLR	NC(UniMod:4)SYLEASPSLEQLR	2	NC(UniMod:4)SYLEASPSLEQLR2	5301.41	4835.23	990.887
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	NCSYLEASPSLEQLREENLK	NC(UniMod:4)SYLEASPSLEQLREENLK	3	NC(UniMod:4)SYLEASPSLEQLREENLK3	50962.3	58436.7	55307.4
P60892	A0A0G2JSV3;M0RBK1;P60892	PRPS1_RAT	Prps1	Ribose-phosphate pyrophosphokinase 1	0	NCTIVSPDAGGAK	NC(UniMod:4)TIVSPDAGGAK	2	NC(UniMod:4)TIVSPDAGGAK2	54249.9	35097.8	53488.8
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	NCTVMFDTPK	NC(UniMod:4)TVMFDTPK	2	NC(UniMod:4)TVMFDTPK2	35902.5	42077.9	38857.6
P40112	P40112;A0A8I6A926;D3Z8J0	PSB3_RAT	Psmb3	Proteasome subunit beta type-3	0	NCVAIAADR	NC(UniMod:4)VAIAADR	2	NC(UniMod:4)VAIAADR2	422853	493929	513862
P40112	P40112;A0A8I6A926	PSB3_RAT	Psmb3	Proteasome subunit beta type-3	0	NCVAIAADRR	NC(UniMod:4)VAIAADRR	2	NC(UniMod:4)VAIAADRR2	61395.7	68682.1	47801.9
P40112	P40112;A0A8I6A926	PSB3_RAT	Psmb3	Proteasome subunit beta type-3	0	NCVAIAADRR	NC(UniMod:4)VAIAADRR	3	NC(UniMod:4)VAIAADRR3	3.59805e+06	3.78007e+06	3.87964e+06
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	NCVDINECVLNSLLCDNGQCR	NC(UniMod:4)VDINEC(UniMod:4)VLNSLLC(UniMod:4)DNGQC(UniMod:4)R	3	NC(UniMod:4)VDINEC(UniMod:4)VLNSLLC(UniMod:4)DNGQC(UniMod:4)R3	8362	7618.56	4930.7
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	NCVLEQTK	NC(UniMod:4)VLEQTK	2	NC(UniMod:4)VLEQTK2	4.25516e+06	4.10333e+06	4.29535e+06
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	NCVLEQTKTPVSCFNVQMCVGATGHNIPQK	NC(UniMod:4)VLEQTKTPVSC(UniMod:4)FNVQMC(UniMod:4)VGATGHNIPQK	4	NC(UniMod:4)VLEQTKTPVSC(UniMod:4)FNVQMC(UniMod:4)VGATGHNIPQK4	12066.5	10280.6	8454.09
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	NCVLGLR	NC(UniMod:4)VLGLR	2	NC(UniMod:4)VLGLR2	92892.6	95122.6	172293
G3V9S9	G3V9S9	G3V9S9_RAT	Sec24d	SEC24 homolog D, COPII coat complex component	1	NCVLLSRPEISPDER	NC(UniMod:4)VLLSRPEISPDER	3	NC(UniMod:4)VLLSRPEISPDER3			5722.52
Q9QZG1	Q9QZG1	S22AN_RAT	Slc22a23	Solute carrier family 22 member 23	1	NCVSPESDIK	NC(UniMod:4)VSPESDIK	2	NC(UniMod:4)VSPESDIK2	67654.8	60855	71032.9
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	NCWHLDAATRPTFLQLR	NC(UniMod:4)WHLDAATRPTFLQLR	3	NC(UniMod:4)WHLDAATRPTFLQLR3	4250.41	5454.87	3191.09
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	NCWHLDAATRPTFLQLR	NC(UniMod:4)WHLDAATRPTFLQLR	4	NC(UniMod:4)WHLDAATRPTFLQLR4	49557.5	50989.9	55827.1
D3ZN39	D3ZN39	D3ZN39_RAT	Usp8	ubiquitinyl hydrolase 1	1	NCYQDDINR	NC(UniMod:4)YQDDINR	2	NC(UniMod:4)YQDDINR2	3388.18		1793.01
Q9ET64	Q9ET64	NSMA_RAT	Smpd2	Sphingomyelin phosphodiesterase 2	1	NCYVSQQDLGPFPFGVR	NC(UniMod:4)YVSQQDLGPFPFGVR	3	NC(UniMod:4)YVSQQDLGPFPFGVR3	12581.4	6291.85	5332.51
A0A8I6AEZ7	A0A8I6AEZ7	A0A8I6AEZ7_RAT	Crlf3	Cytokine receptor-like factor 3	1	NDAESAGVLYSSAPTYFCGQTLTFR	NDAESAGVLYSSAPTYFC(UniMod:4)GQTLTFR	3	NDAESAGVLYSSAPTYFC(UniMod:4)GQTLTFR3	50957.5	44910.1	54029
P47861	P47861	SYT5_RAT	Syt5	Synaptotagmin-5	1	NDAIGEVR	NDAIGEVR	2	NDAIGEVR2	63691.6	51495.4	66702
A0A0G2JZU8	A0A0G2JZU8	A0A0G2JZU8_RAT	Usp9y	ubiquitinyl hydrolase 1	1	NDAISMIIK	NDAISMIIK	2	NDAISMIIK2	113221		153926
Q09326	Q09326	MGAT2_RAT	Mgat2	Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	1	NDALAPPLLDSEPLR	NDALAPPLLDSEPLR	2	NDALAPPLLDSEPLR2	41138.7	47993.9	48087.7
A0A8I5ZUS1	A0A8I5ZUS1	A0A8I5ZUS1_RAT	Map3k4	Mitogen activated protein kinase kinase kinase 4	1	NDALELCNR	NDALELC(UniMod:4)NR	2	NDALELC(UniMod:4)NR2	3432.87		5069.68
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	NDALSMIIK	NDALSMIIK	2	NDALSMIIK2		131293	
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	NDANPETHAFVTSPEIVTALAIAGTLK	NDANPETHAFVTSPEIVTALAIAGTLK	3	NDANPETHAFVTSPEIVTALAIAGTLK3	54173	46942.9	64435.3
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	NDANPETHAFVTSPEIVTALAIAGTLK	NDANPETHAFVTSPEIVTALAIAGTLK	4	NDANPETHAFVTSPEIVTALAIAGTLK4	4494.6	3641.84	1741.08
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	NDANPGIR	NDANPGIR	2	NDANPGIR2		33042.7	25000.8
Q642B0	Q642B0	Q642B0_RAT	Gpc4	Glypican 4	1	NDAPLYEINGDHLK	NDAPLYEINGDHLK	3	NDAPLYEINGDHLK3	8730.02	13532.5	20098.1
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	NDASHLLVFTTDAK	NDASHLLVFTTDAK	2	NDASHLLVFTTDAK2	457210	201801	494829
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	NDASHLLVFTTDAK	NDASHLLVFTTDAK	3	NDASHLLVFTTDAK3	2.70967e+06	2.72339e+06	3.76939e+06
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	NDATAQAFLAEASVMTQLR	NDATAQAFLAEASVMTQLR	3	NDATAQAFLAEASVMTQLR3	14212.6	15474	16514.6
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	NDAVGGHPAQMQQKPSK	NDAVGGHPAQMQQKPSK	3	NDAVGGHPAQMQQKPSK3			9230.85
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	NDAWLPSQATR	NDAWLPSQATR	2	NDAWLPSQATR2	64153.8	65330.2	60923.9
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	NDCMQVMNNVVSENMLCAGIIGDTR	NDC(UniMod:4)MQVMNNVVSENMLC(UniMod:4)AGIIGDTR	3	NDC(UniMod:4)MQVMNNVVSENMLC(UniMod:4)AGIIGDTR3	32202.2	43827.2	38505.1
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	NDDDDEDSYEIYQPLEPTSMTTR	NDDDDEDSYEIYQPLEPTSMTTR	3	NDDDDEDSYEIYQPLEPTSMTTR3	7715.83	15182.2	6261.48
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	NDDDEEEAAR	NDDDEEEAAR	2	NDDDEEEAAR2			301344
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	NDDDEEEAARER	NDDDEEEAARER	2	NDDDEEEAARER2			1761.77
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	NDDDEEEAARER	NDDDEEEAARER	3	NDDDEEEAARER3			3948.37
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	NDDDSSEAMNDILAQVATNTETSK	NDDDSSEAMNDILAQVATNTETSK	3	NDDDSSEAMNDILAQVATNTETSK3		12262.2	
Q9QZM5	Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	1	NDDGWFEGVCNR	NDDGWFEGVC(UniMod:4)NR	2	NDDGWFEGVC(UniMod:4)NR2	56894.3	49598.5	54944.3
D3ZHV2	D3ZHV2;A0A8I5ZQD4	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	0	NDDITDGNPK	NDDITDGNPK	2	NDDITDGNPK2	21922.3	11710.6	20220.5
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	NDEAEYVCIAENK	NDEAEYVC(UniMod:4)IAENK	2	NDEAEYVC(UniMod:4)IAENK2	1.13145e+06	1.0991e+06	1.16192e+06
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	NDEAEYVCIAENK	NDEAEYVC(UniMod:4)IAENK	3	NDEAEYVC(UniMod:4)IAENK3	169387	178695	168287
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	NDECVLEDNSQR	NDEC(UniMod:4)VLEDNSQR	2	NDEC(UniMod:4)VLEDNSQR2	41404.3	47691.8	40462.9
A9UMV8;P02262;P0C169;P0C170;P0CC09;Q00728;Q4FZT6;Q64598	Q00728;Q64598;D3ZVK7;Q4FZT6;P0C169;P0C170;A9UMV8;A0A8I6AWT3;P02262;D3ZXP3;G3V9C0;A0A8I5ZYY0;M0RDM4;Q6I8Q6;P0CC09;A0A8I6ARS7;A0A8L2QLK6	H2A1C_RAT;H2A1E_RAT;H2A1F_RAT;H2A1_RAT;H2A2A_RAT;H2A3_RAT;H2A4_RAT;H2AJ_RAT	H2ac18;H2ac25;H2aj	Histone H2A.J	0	NDEELNK	NDEELNK	1	NDEELNK1	8865.52		2650.85
D3ZPP3	D3ZPP3	D3ZPP3_RAT	Psd4	Pleckstrin and Sec7 domain containing 4	1	NDEGAWNLALR	NDEGAWNLALR	2	NDEGAWNLALR2	2307.56		3941.41
P35704	P35704	PRDX2_RAT	Prdx2	Peroxiredoxin-2	1	NDEGIAYR	NDEGIAYR	2	NDEGIAYR2	95796.5	98983.7	88247
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	NDEIEPAAFTYEK	NDEIEPAAFTYEK	2	NDEIEPAAFTYEK2	14342.6	14813.8	12375.6
A0A8I5ZPV1	A0A8I5ZPV1	A0A8I5ZPV1_RAT	Tbc1d22a	TBC1 domain family, member 22a	1	NDEVHQDTYR	NDEVHQDTYR	2	NDEVHQDTYR2	3997.04		
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	NDFAGLK	NDFAGLK	2	NDFAGLK2	12181.7	8770.93	12806.7
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	NDFASGTSSR	NDFASGTSSR	2	NDFASGTSSR2	413962	491250	471501
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	NDFAVESYENK	NDFAVESYENK	2	NDFAVESYENK2	22868.5	31575.3	35236.1
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	NDFDPEKEQK	NDFDPEKEQK	3	NDFDPEKEQK3	15479.4	15993.4	14039
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	NDFEQGSQGQEGDSNAEGEDK	NDFEQGSQGQEGDSNAEGEDK	3	NDFEQGSQGQEGDSNAEGEDK3	116732	148640	134441
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	NDFFLEGPFMPPR	NDFFLEGPFMPPR	2	NDFFLEGPFMPPR2	83153.1	88977.1	91710.5
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	NDFFLEGPFMPPR	NDFFLEGPFMPPR	3	NDFFLEGPFMPPR3		8801.55	4385.22
Q5PPG6	Q5PPG6	NP1L5_RAT	Nap1l5	Nucleosome assembly protein 1-like 5	1	NDFIESLPNPVK	NDFIESLPNPVK	2	NDFIESLPNPVK2	23469	13430.6	26011
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	NDFLVLHLADLIR	NDFLVLHLADLIR	3	NDFLVLHLADLIR3	6550.32	4139.86	7856.99
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	NDFMGSLSFGVSELMK	NDFMGSLSFGVSELMK	2	NDFMGSLSFGVSELMK2	92225.5	68007.2	91235.4
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	NDFMGSLSFGVSELMK	NDFMGSLSFGVSELMK	3	NDFMGSLSFGVSELMK3	2332.05	2586.49	5823.7
Q3T1J1	Q3T1J1	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	1	NDFQLIGIQDGYLSLLQDSGEVR	NDFQLIGIQDGYLSLLQDSGEVR	3	NDFQLIGIQDGYLSLLQDSGEVR3	43433.5	29634.7	43293.7
Q4V885	Q4V885	COL12_RAT	Colec12	Collectin-12	1	NDFQNLQQVFLQAK	NDFQNLQQVFLQAK	2	NDFQNLQQVFLQAK2	4688.32	6506.07	720.594
Q4V885	Q4V885	COL12_RAT	Colec12	Collectin-12	1	NDFQNLQQVFLQAK	NDFQNLQQVFLQAK	3	NDFQNLQQVFLQAK3	2391.36	1681.1	1211.27
D4ACD2	D4ACD2	D4ACD2_RAT	Bach1	BTB domain and CNC homolog 1	1	NDFQSLLK	NDFQSLLK	2	NDFQSLLK2		9548.63	9858.66
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	NDFSIWSILR	NDFSIWSILR	2	NDFSIWSILR2	11458.8	13940.6	16383.5
Q6PEC4	Q6PEC4	SKP1_RAT	Skp1	S-phase kinase-associated protein 1	1	NDFTEEEEAQVR	NDFTEEEEAQVR	2	NDFTEEEEAQVR2	56445.8	57883.7	17510.4
Q6PEC4	Q6PEC4	SKP1_RAT	Skp1	S-phase kinase-associated protein 1	1	NDFTEEEEAQVR	NDFTEEEEAQVR	3	NDFTEEEEAQVR3	9631.94	8728.29	8493.83
Q6PEC4	Q6PEC4	SKP1_RAT	Skp1	S-phase kinase-associated protein 1	1	NDFTEEEEAQVRK	NDFTEEEEAQVRK	2	NDFTEEEEAQVRK2	8445.51	5187.87	8117.72
Q6PEC4	Q6PEC4	SKP1_RAT	Skp1	S-phase kinase-associated protein 1	1	NDFTEEEEAQVRK	NDFTEEEEAQVRK	3	NDFTEEEEAQVRK3	65013	53921.5	55718.4
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	NDFWEGIK	NDFWEGIK	2	NDFWEGIK2	26332.1	21720.5	17937.8
O55156	O55156;Q9JK25	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	0	NDGAVAGTR	NDGAVAGTR	2	NDGAVAGTR2			66299.2
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	NDGGNELDGK	NDGGNELDGK	2	NDGGNELDGK2	18346.2	22213.7	
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	NDGMSGDLAGLQNGSDLQFIEMQR	NDGMSGDLAGLQNGSDLQFIEMQR	3	NDGMSGDLAGLQNGSDLQFIEMQR3	62343.2	67631.8	70779
A0A0G2K1D2	A0A0G2K1D2	A0A0G2K1D2_RAT	Rap1gds1	Rap1 GTPase-GDP dissociation stimulator 1	1	NDGNCIHMVDNGIVEK	NDGNC(UniMod:4)IHMVDNGIVEK	3	NDGNC(UniMod:4)IHMVDNGIVEK3		2361.01	4561.05
B4F795	B4F795	CTL2_RAT	Slc44a2	Choline transporter-like protein 2	1	NDGSAERPYFMSSTLK	NDGSAERPYFMSSTLK	3	NDGSAERPYFMSSTLK3	71437.6	76338.8	80395.8
B4F795	B4F795	CTL2_RAT	Slc44a2	Choline transporter-like protein 2	1	NDGSAERPYFMSSTLKK	NDGSAERPYFMSSTLKK	3	NDGSAERPYFMSSTLKK3	4916.38	4327.97	3867.71
B4F795	B4F795	CTL2_RAT	Slc44a2	Choline transporter-like protein 2	1	NDGSAERPYFMSSTLKK	NDGSAERPYFMSSTLKK	4	NDGSAERPYFMSSTLKK4	3222.41	4145.79	8267.32
P47196	P47196	AKT1_RAT	Akt1	RAC-alpha serine/threonine-protein kinase	1	NDGTFIGYK	NDGTFIGYK	2	NDGTFIGYK2	14496.3	15057	17557.7
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	NDGTVQGR	NDGTVQGR	2	NDGTVQGR2			4435.95
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	NDGVLLLQALTR	NDGVLLLQALTR	2	NDGVLLLQALTR2	175038	181288	155839
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	NDGVLLLQALTR	NDGVLLLQALTR	3	NDGVLLLQALTR3	7112.62	7212.16	6685.22
Q3B7U1	Q3B7U1	Q3B7U1_RAT	Maged2	MAGE family member D2	1	NDHLYILLSTLEPTDAGILGTTK	NDHLYILLSTLEPTDAGILGTTK	3	NDHLYILLSTLEPTDAGILGTTK3	13630.8	12289.4	36828
A0A8I5ZM79	A0A8I5ZM79	A0A8I5ZM79_RAT	Psmd7	Proteasome 26S subunit, non-ATPase 7	1	NDIAINELMK	NDIAINELMK	2	NDIAINELMK2	206990	208330	196632
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	NDIENILNWSIMQHK	NDIENILNWSIMQHK	2	NDIENILNWSIMQHK2	5545.54	7560.26	5043.13
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	NDIENILNWSIMQHK	NDIENILNWSIMQHK	3	NDIENILNWSIMQHK3			10255.5
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	NDIFEDAAILCQR	NDIFEDAAILC(UniMod:4)QR	2	NDIFEDAAILC(UniMod:4)QR2	13806.4	14601.4	9515.47
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	NDINLLK	NDINLLK	2	NDINLLK2	12156.2	12931.4	16870.3
G3V6R4	G3V6R4	G3V6R4_RAT	Lrrc1	Leucine rich repeat containing 1	1	NDIPEIPESISFCK	NDIPEIPESISFC(UniMod:4)K	2	NDIPEIPESISFC(UniMod:4)K2	30394.6	15319.1	21673.4
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	NDIQIVSLQPSEPHSHLDVLLFVEK	NDIQIVSLQPSEPHSHLDVLLFVEK	3	NDIQIVSLQPSEPHSHLDVLLFVEK3	5761.22	9264.17	10116.7
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	NDIQIVSLQPSEPHSHLDVLLFVEK	NDIQIVSLQPSEPHSHLDVLLFVEK	4	NDIQIVSLQPSEPHSHLDVLLFVEK4	19635.9	21044.2	15308.1
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	NDISRPAALLTR	NDISRPAALLTR	3	NDISRPAALLTR3	98831	92384	96721.3
P04041	P04041	GPX1_RAT	Gpx1	Glutathione peroxidase 1	1	NDISWNFEK	NDISWNFEK	2	NDISWNFEK2	52228.2	56714.8	66925.8
Q5EB77	A0A8I5ZQR4;Q5EB77	RAB18_RAT	Rab18	Ras-related protein Rab-18	0	NDIVNMLVGNK	NDIVNMLVGNK	2	NDIVNMLVGNK2	143203	117146	138545
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	NDKESLTLDEADWK	NDKESLTLDEADWK	2	NDKESLTLDEADWK2	7798.03	7579.31	9444.9
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	NDKESLTLDEADWK	NDKESLTLDEADWK	3	NDKESLTLDEADWK3	173851	159155	164750
D3ZUV3	D3ZUV3	D3ZUV3_RAT	Eif2a	Eukaryotic translation initiation factor 2A	1	NDLAPTPVPQSAPR	NDLAPTPVPQSAPR	2	NDLAPTPVPQSAPR2	16342.6	5271.58	3910.2
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	NDLDQAEDK	NDLDQAEDK	2	NDLDQAEDK2	24065.8	22376.1	23147.4
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	NDLDTLLSMEIK	NDLDTLLSMEIK	2	NDLDTLLSMEIK2	7949.38	5078.06	4147.83
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	NDLETQISNLNDK	NDLETQISNLNDK	2	NDLETQISNLNDK2	19726.2	23624	15197.2
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	NDLGHPFCENLR	NDLGHPFC(UniMod:4)ENLR	3	NDLGHPFC(UniMod:4)ENLR3	17381.8	18785.8	16519.4
P20786	P20786	PGFRA_RAT	Pdgfra	Platelet-derived growth factor receptor alpha	1	NDLGIGNR	NDLGIGNR	2	NDLGIGNR2	35335.4	23958.4	34571.2
A0A096MKE0	A0A096MKE0	A0A096MKE0_RAT	Asph	Aspartate-beta-hydroxylase	1	NDLGVGYLLMGDNDSAK	NDLGVGYLLMGDNDSAK	2	NDLGVGYLLMGDNDSAK2	2704.02	5589.08	8439.11
A0A8I5ZXD6	D4A5F0;A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	0	NDLISIK	NDLISIK	2	NDLISIK2	50381.8	64885.5	61324.9
Q8R4E1	Q8R4E1	TIP_RAT	Itfg1	T-cell immunomodulatory protein	1	NDLIVFLADQSAPYFKPK	NDLIVFLADQSAPYFKPK	3	NDLIVFLADQSAPYFKPK3	6090.83	8855.79	8734.23
D4A0G9	D4A0G9	D4A0G9_RAT	Ercc6l	ERCC excision repair 6 like, spindle assembly checkpoint helicase	1	NDLIVWIR	NDLIVWIR	2	NDLIVWIR2	5436.86	8099.21	6490.05
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	NDLLVLHLSDLIR	NDLLVLHLSDLIR	2	NDLLVLHLSDLIR2	4252	10353.5	13095.8
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	NDLLVLHLSDLIR	NDLLVLHLSDLIR	3	NDLLVLHLSDLIR3	10183.3	12315.5	15337.3
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	NDLMQLK	NDLMQLK	2	NDLMQLK2	25477.4	22132.3	19707.9
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	NDLNHSTQFVQGLALCTLGCMGSSEMCR	NDLNHSTQFVQGLALC(UniMod:4)TLGC(UniMod:4)MGSSEMC(UniMod:4)R	4	NDLNHSTQFVQGLALC(UniMod:4)TLGC(UniMod:4)MGSSEMC(UniMod:4)R4	10270.7	2885.66	6869.08
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	NDLNPMFLDQVAK	NDLNPMFLDQVAK	2	NDLNPMFLDQVAK2	32304.5	29543.5	22099.1
E9PT90	E9PT90	E9PT90_RAT	Spart	Spartin	1	NDLQDVPK	NDLQDVPK	2	NDLQDVPK2	14343.3	16799.7	27066.9
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	NDLQSPTEHISDYGFGGVMGR	NDLQSPTEHISDYGFGGVMGR	3	NDLQSPTEHISDYGFGGVMGR3	80968.6	87830.6	74713.3
A0A0G2K8Q7	A0A0G2K8Q7	A0A0G2K8Q7_RAT	Lsm2	U6 snRNA-associated Sm-like protein LSm2	1	NDLSICGTLHSVDQYLNIK	NDLSIC(UniMod:4)GTLHSVDQYLNIK	3	NDLSIC(UniMod:4)GTLHSVDQYLNIK3	12971.6	11949.3	13688.3
P55213	P55213	CASP3_RAT	Casp3	Caspase-3	1	NDLTREEIMELMDSVSK	NDLTREEIMELMDSVSK	3	NDLTREEIMELMDSVSK3	25656.9	26220	21144.2
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	NDLVEALK	NDLVEALK	1	NDLVEALK1	7383.8	8402.15	3912.75
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	NDLVEALK	NDLVEALK	2	NDLVEALK2	425417	347008	417995
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	NDLVEALKR	NDLVEALKR	2	NDLVEALKR2	67107.2	69830.2	55754.2
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	NDLVSATK	NDLVSATK	1	NDLVSATK1	2.79346e+06	3.11664e+06	2.77262e+06
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	NDLVSATK	NDLVSATK	2	NDLVSATK2	187429	167098	138553
P35435	P35435	ATPG_RAT	Atp5f1c	ATP synthase subunit gamma, mitochondrial	1	NDMAALTAAGK	NDMAALTAAGK	2	NDMAALTAAGK2	461600	406761	463586
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	NDMANMYVLLR	NDMANMYVLLR	2	NDMANMYVLLR2	6106.68	4095.68	4666.7
F1LN92	F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	1	NDMVELLGPR	NDMVELLGPR	2	NDMVELLGPR2	4830.16	6216.56	5970
F1LN92	F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	1	NDMVELLGPRPFTEK	NDMVELLGPRPFTEK	3	NDMVELLGPRPFTEK3	14233.5	29368.3	16994.4
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	NDNDNIFLSPLSISTAFAMTK	NDNDNIFLSPLSISTAFAMTK	3	NDNDNIFLSPLSISTAFAMTK3	22724.9	15558.7	19256.3
D3ZHA0	D3ZHA0;A0A8I5ZV49	FLNC_RAT	Flnc	Filamin-C	0	NDNDTFTVK	NDNDTFTVK	2	NDNDTFTVK2	2.25333e+06	2.30487e+06	2.4887e+06
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	NDNLVYVYNLGTK	NDNLVYVYNLGTK	2	NDNLVYVYNLGTK2	22372.7	17702.1	22241.3
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	NDNTEAFYK	NDNTEAFYK	2	NDNTEAFYK2	28879.4	32751.9	32095.4
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	NDPAEAAK	NDPAEAAK	1	NDPAEAAK1			5202.67
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	NDPAEAAK	NDPAEAAK	2	NDPAEAAK2			42095.5
O88775	O88775	EMB_RAT	Emb	Embigin	1	NDPDDGKEFEQIEQLK	NDPDDGKEFEQIEQLK	3	NDPDDGKEFEQIEQLK3	14229.8	8563.54	7981.01
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	NDPDKEYNMPK	NDPDKEYNMPK	3	NDPDKEYNMPK3	23529.9	27581.9	18260.9
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	NDPEILAMTNLVSAYQNNDITEFEK	NDPEILAMTNLVSAYQNNDITEFEK	3	NDPEILAMTNLVSAYQNNDITEFEK3	16856.8	12100.8	18642
P19132	A0A8I5ZU81;P19132	FRIH_RAT	Fth1	Ferritin heavy chain	0	NDPHLCDFIETHYLNEQVK	NDPHLC(UniMod:4)DFIETHYLNEQVK	3	NDPHLC(UniMod:4)DFIETHYLNEQVK3	6692.58		
P19132	A0A8I5ZU81;P19132	FRIH_RAT	Fth1	Ferritin heavy chain	0	NDPHLCDFIETHYLNEQVK	NDPHLC(UniMod:4)DFIETHYLNEQVK	4	NDPHLC(UniMod:4)DFIETHYLNEQVK4	14914.4	5791.12	15883.9
Q5XIM0	Q5XIM0	Q5XIM0_RAT	Bcs1l	Mitochondrial chaperone BCS1	1	NDPMGAIHNVESLR	NDPMGAIHNVESLR	3	NDPMGAIHNVESLR3	21974.2	20316.6	31684.5
F1LNX8	F1LNX8	F1LNX8_RAT	Cmahp	Cytidine monophosphate-N-acetylneuraminic acid hydroxylase	1	NDPNQLNNLIK	NDPNQLNNLIK	2	NDPNQLNNLIK2	14037.9	17492.9	24239.4
B5DF55	B5DF55	B5DF55_RAT	Stam	Signal transducing adaptor molecule	1	NDPQLSLISAMIK	NDPQLSLISAMIK	2	NDPQLSLISAMIK2	33201.6	28678.4	30200.6
F1LPV0	F1LPV0	F1LPV0_RAT	Nars1	asparagine--tRNA ligase	1	NDPSLPEPACVK	NDPSLPEPAC(UniMod:4)VK	2	NDPSLPEPAC(UniMod:4)VK2	43739.7	34092.7	20526.8
A0A8I6A6W3	A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	1	NDPYHPDHFNCANCGK	NDPYHPDHFNC(UniMod:4)ANC(UniMod:4)GK	2	NDPYHPDHFNC(UniMod:4)ANC(UniMod:4)GK2	4162.83	4583.67	1927.71
A0A8I6A6W3	A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	1	NDPYHPDHFNCANCGK	NDPYHPDHFNC(UniMod:4)ANC(UniMod:4)GK	3	NDPYHPDHFNC(UniMod:4)ANC(UniMod:4)GK3	278530	238964	279564
A0A8I6A6W3	A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	1	NDPYHPDHFNCANCGK	NDPYHPDHFNC(UniMod:4)ANC(UniMod:4)GK	4	NDPYHPDHFNC(UniMod:4)ANC(UniMod:4)GK4	194896	192325	207165
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	NDQCYDDIR	NDQC(UniMod:4)YDDIR	2	NDQC(UniMod:4)YDDIR2	392760	371459	372371
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	NDQCYEDIR	NDQC(UniMod:4)YEDIR	2	NDQC(UniMod:4)YEDIR2	716426	660131	792761
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	NDQEATLEMIFPGR	NDQEATLEMIFPGR	2	NDQEATLEMIFPGR2	10067.7	7119.38	6300.86
D4A7F0	D4A7F0	D4A7F0_RAT	Ubr3	E3 ubiquitin-protein ligase	1	NDQVLQGFSVDK	NDQVLQGFSVDK	2	NDQVLQGFSVDK2	4181.43	5763.81	1841.59
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	NDQWAWETLR	NDQWAWETLR	2	NDQWAWETLR2	6975.87	7179.17	6122.95
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	NDQWNWDNIR	NDQWNWDNIR	2	NDQWNWDNIR2	117718	117196	120792
A0A0G2JYI7	A0A0G2JYI7	A0A0G2JYI7_RAT	Ubap2	Ubiquitin-associated protein 2	1	NDSDFEAK	NDSDFEAK	2	NDSDFEAK2	3272.37		
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	NDSFTACIELGK	NDSFTAC(UniMod:4)IELGK	2	NDSFTAC(UniMod:4)IELGK2	16511.5	14137.9	7570.98
D4AE80	D4AE80	D4AE80_RAT	Dcp1a	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	NDSGFLSTLHEVYLQVLTK	NDSGFLSTLHEVYLQVLTK	3	NDSGFLSTLHEVYLQVLTK3	1737.72	2557.45	
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	NDSLESTGLGLSSSR	NDSLESTGLGLSSSR	2	NDSLESTGLGLSSSR2	1212.52		700.833
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	NDSMSTTR	NDSMSTTR	2	NDSMSTTR2			52240.3
D4A6B3	D4A6B3	D4A6B3_RAT	Slamf6	SLAM family member 6	1	NDSMTIYSIVNHSR	NDSMTIYSIVNHSR	2	NDSMTIYSIVNHSR2	5608.94	2769.22	1802.01
A0A8I6A8L3	A0A8I6A8L3	A0A8I6A8L3_RAT	Dnpep	Aspartyl aminopeptidase	1	NDSPCGTTIGPILASR	NDSPC(UniMod:4)GTTIGPILASR	2	NDSPC(UniMod:4)GTTIGPILASR2	43490.2	29723.4	44393
A0A8I6A8L3	A0A8I6A8L3	A0A8I6A8L3_RAT	Dnpep	Aspartyl aminopeptidase	1	NDSPCGTTIGPILASR	NDSPC(UniMod:4)GTTIGPILASR	3	NDSPC(UniMod:4)GTTIGPILASR3	6121.03	818.442	5811.17
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	NDSQLVVEAYK	NDSQLVVEAYK	2	NDSQLVVEAYK2	44113	35691.1	40507.4
B2GUZ1	Q5D006;B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	0	NDSVIVDTFHGLFK	NDSVIVDTFHGLFK	3	NDSVIVDTFHGLFK3	20232.2	20440.7	10051
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	NDSVLDMAR	NDSVLDMAR	2	NDSVLDMAR2	18412.7	18602.1	9831.75
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	NDSVVAGGGAIEMELSK	NDSVVAGGGAIEMELSK	2	NDSVVAGGGAIEMELSK2	34212.5	22335.3	28326
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	NDSYTLESR	NDSYTLESR	2	NDSYTLESR2	208113	189998	201370
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	NDSYTLHK	NDSYTLHK	2	NDSYTLHK2	93917.9	40923.6	77112.6
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	NDTLHCLK	NDTLHC(UniMod:4)LK	2	NDTLHC(UniMod:4)LK2	7219.98	4805.21	2523.34
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	NDTVTPAELNELR	NDTVTPAELNELR	2	NDTVTPAELNELR2	24656.9	27181.2	15473.8
Q62921	Q62921	HOIL1_RAT	Rbck1	RanBP-type and C3HC4-type zinc finger-containing protein 1	1	NDVAAQQTTEMLR	NDVAAQQTTEMLR	2	NDVAAQQTTEMLR2	11523.2	4333.41	9265.46
Q66H62	A0A8I6A0L1;Q66H62	CYLD_RAT	Cyld	Ubiquitin carboxyl-terminal hydrolase CYLD	0	NDVEYYSETQELLR	NDVEYYSETQELLR	2	NDVEYYSETQELLR2	1645.7	3218.6	1668.43
D4ADM2	D4ADM2	D4ADM2_RAT	Pan3	PAN2-PAN3 deadenylation complex subunit PAN3	1	NDVIEEDLAK	NDVIEEDLAK	2	NDVIEEDLAK2	15935.6		24646.6
Q01205	Q01205	ODO2_RAT	Dlst	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial	1	NDVITVQTPAFAESVTEGDVR	NDVITVQTPAFAESVTEGDVR	3	NDVITVQTPAFAESVTEGDVR3	50806.2	33185.5	46289.8
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	NDVLAHQATVETVNK	NDVLAHQATVETVNK	2	NDVLAHQATVETVNK2	2650.64		2914.74
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	NDVLAHQATVETVNK	NDVLAHQATVETVNK	3	NDVLAHQATVETVNK3	31346.9	35280.7	38781.6
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	NDVLTLLSSINK	NDVLTLLSSINK	2	NDVLTLLSSINK2	29735.1	37468.6	21241
P97690	P97690	SMC3_RAT	Smc3	Structural maintenance of chromosomes protein 3	1	NDVMNLLESAGFSR	NDVMNLLESAGFSR	3	NDVMNLLESAGFSR3		8297.22	
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	NDVNIYPEYILPGIAHLAQDDATIVR	NDVNIYPEYILPGIAHLAQDDATIVR	3	NDVNIYPEYILPGIAHLAQDDATIVR3	4584.14	3361.09	
Q68FQ2	Q68FQ2	JAM3_RAT	Jam3	Junctional adhesion molecule C	1	NDVPLPTDSR	NDVPLPTDSR	2	NDVPLPTDSR2	15109.6	13168.1	
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	NDWETTIENFHVVETLADNAIIIYQTHK	NDWETTIENFHVVETLADNAIIIYQTHK	4	NDWETTIENFHVVETLADNAIIIYQTHK4	4675.73	1659.79	
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	NDYCCFAAFPK	NDYC(UniMod:4)C(UniMod:4)FAAFPK	2	NDYC(UniMod:4)C(UniMod:4)FAAFPK2	14679.6	17760.8	20431.2
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	NDYDQLQK	NDYDQLQK	2	NDYDQLQK2	19048.9	21606.9	23895.9
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	NDYEARPQYYK	NDYEARPQYYK	2	NDYEARPQYYK2	9187.42	7047.99	7593.21
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	NDYEARPQYYK	NDYEARPQYYK	3	NDYEARPQYYK3	97511.3	108776	103886
Q62902	Q62902	LMAN1_RAT	Lman1	Protein ERGIC-53	1	NDYEFCAK	NDYEFC(UniMod:4)AK	2	NDYEFC(UniMod:4)AK2	44425	45899.8	40337.5
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	NDYLDIYAIGVGK	NDYLDIYAIGVGK	2	NDYLDIYAIGVGK2	12598.8	9357.83	12515.7
Q62740	Q62740	SPP24_RAT	Spp2	Secreted phosphoprotein 24	1	NDYLLGFLYDEPK	NDYLLGFLYDEPK	2	NDYLLGFLYDEPK2	57606.6	69330.6	77089.9
Q62740	Q62740	SPP24_RAT	Spp2	Secreted phosphoprotein 24	1	NDYLLGFLYDEPK	NDYLLGFLYDEPK	3	NDYLLGFLYDEPK3	11266.1	4580.89	6691.98
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	NDYLLNLAATNAAISK	NDYLLNLAATNAAISK	2	NDYLLNLAATNAAISK2	11599.1	13318.9	19130.8
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	NDYLLNLAATNAAISK	NDYLLNLAATNAAISK	3	NDYLLNLAATNAAISK3	5165.27	2598.23	5772.17
Q8K3V3	Q8K3V3	AGRG1_RAT	Adgrg1	Adhesion G-protein coupled receptor G1	1	NDYLLSSR	NDYLLSSR	2	NDYLLSSR2	8716.67	8386.76	7984.29
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	NDYSGEILNNCCVMEYHQATGTLSAHFR	NDYSGEILNNC(UniMod:4)C(UniMod:4)VMEYHQATGTLSAHFR	4	NDYSGEILNNC(UniMod:4)C(UniMod:4)VMEYHQATGTLSAHFR4	2382.13	5368.19	1763.53
A0A0G2K350	A0A0G2K350	A0A0G2K350_RAT	Napg	NSF attachment protein gamma	1	NDYVAAER	NDYVAAER	2	NDYVAAER2	74697.9	90050.8	93364.9
Q5XI07	Q5XI07	LPP_RAT	Lpp	Lipoma-preferred partner homolog	1	NEADPAYGQQVQPNTWK	NEADPAYGQQVQPNTWK	2	NEADPAYGQQVQPNTWK2	13559.2	5797.87	11807.4
Q5XI07	Q5XI07	LPP_RAT	Lpp	Lipoma-preferred partner homolog	1	NEADPAYGQQVQPNTWK	NEADPAYGQQVQPNTWK	3	NEADPAYGQQVQPNTWK3	5234.53	7244.49	10054.3
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	NEAEVINMSEELTQLEGILK	NEAEVINMSEELTQLEGILK	3	NEAEVINMSEELTQLEGILK3	2577.08	3271.68	
P0C5E3	P0C5E3;A0A0G2K046	PALLD_RAT	Palld	Palladin (Fragment)	0	NEAGIVSCTAR	NEAGIVSC(UniMod:4)TAR	2	NEAGIVSC(UniMod:4)TAR2	8815.54	8114.41	11743.7
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	NEAISQQVHVLQK	NEAISQQVHVLQK	3	NEAISQQVHVLQK3	17679.3	24860.5	19219.3
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	NEAITGPLPDSPK	NEAITGPLPDSPK	2	NEAITGPLPDSPK2	5995.51	6368.17	8479.29
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	NEANDPALK	NEANDPALK	2	NEANDPALK2	60179.8	52974.7	76679.4
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	NEASALLYLLMR	NEASALLYLLMR	2	NEASALLYLLMR2	3838.32	3380.38	
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	NEAVAMK	NEAVAMK	2	NEAVAMK2	28666.6	32098.3	33072.2
D4A1Y5	D4A1Y5	D4A1Y5_RAT	Mthfd2	methenyltetrahydrofolate cyclohydrolase	1	NEAVVISGR	NEAVVISGR	2	NEAVVISGR2		5607.37	8040.64
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	NEAWLSEVEGK	NEAWLSEVEGK	2	NEAWLSEVEGK2	450697	426726	429498
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	NECDPALALLSDYVLHNSNTMR	NEC(UniMod:4)DPALALLSDYVLHNSNTMR	3	NEC(UniMod:4)DPALALLSDYVLHNSNTMR3	44717.1	129185	112512
P02770	P02770	ALBU_RAT	Alb	Albumin	1	NECFLQHK	NEC(UniMod:4)FLQHK	2	NEC(UniMod:4)FLQHK2	144999	88334.3	70767.3
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	NECHLER	NEC(UniMod:4)HLER	1	NEC(UniMod:4)HLER1			100357
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	NECHLER	NEC(UniMod:4)HLER	2	NEC(UniMod:4)HLER2			831773
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	NECHLERTDGCQHFCHPGQSSYMCSCAK	NEC(UniMod:4)HLERTDGC(UniMod:4)QHFC(UniMod:4)HPGQSSYMC(UniMod:4)SC(UniMod:4)AK	4	NEC(UniMod:4)HLERTDGC(UniMod:4)QHFC(UniMod:4)HPGQSSYMC(UniMod:4)SC(UniMod:4)AK4		4298.32	
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	NECLEAGALFQDPSFPALPSSLGFK	NEC(UniMod:4)LEAGALFQDPSFPALPSSLGFK	3	NEC(UniMod:4)LEAGALFQDPSFPALPSSLGFK3	448439	429163	419898
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	NECLEAGALFQDPSFPALPSSLGFK	NEC(UniMod:4)LEAGALFQDPSFPALPSSLGFK	4	NEC(UniMod:4)LEAGALFQDPSFPALPSSLGFK4	8332.78	10991.9	9251.53
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	NECSLHIHASYSISQK	NEC(UniMod:4)SLHIHASYSISQK	3	NEC(UniMod:4)SLHIHASYSISQK3	5000.2	8261.19	4924.04
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	NECSLHIHASYSISQK	NEC(UniMod:4)SLHIHASYSISQK	4	NEC(UniMod:4)SLHIHASYSISQK4	3363.97		6278.86
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	NECVVVIR	NEC(UniMod:4)VVVIR	2	NEC(UniMod:4)VVVIR2	254140	241094	259864
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	NEDASFPSTPEPVK	NEDASFPSTPEPVK	2	NEDASFPSTPEPVK2	10148.7	8004.22	5481.43
P98105	P98105	LYAM2_RAT	Sele	E-selectin	1	NEDCVEIYIQRPK	NEDC(UniMod:4)VEIYIQRPK	3	NEDC(UniMod:4)VEIYIQRPK3	28340.1	12266.4	23457.3
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	NEDDCVVR	NEDDC(UniMod:4)VVR	2	NEDDC(UniMod:4)VVR2	3.91049e+06	4.18114e+06	5.0016e+06
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	NEDELEFAK	NEDELEFAK	2	NEDELEFAK2	27638.5	34725	38446.7
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	NEDGTWPR	NEDGTWPR	2	NEDGTWPR2	145724	150796	146703
Q4AEG6	Q4AEG6	BMP10_RAT	Bmp10	Bone morphogenetic protein 10	1	NEDLFSQPVSFNGIR	NEDLFSQPVSFNGIR	2	NEDLFSQPVSFNGIR2	5912.56	5197.64	5943.57
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	NEDLIFNESLGQGTFTK	NEDLIFNESLGQGTFTK	2	NEDLIFNESLGQGTFTK2	7266.73		2301.83
A0A8I6AC05	D3ZQM9;A0A8I6AC05	A0A8I6AC05_RAT	ENSRNOG00000070455	Ig-like domain-containing protein	0	NEDMATYFCAR	NEDMATYFC(UniMod:4)AR	2	NEDMATYFC(UniMod:4)AR2	59543.3	56048.3	47100.1
D3ZCD0	D3ZCD0	D3ZCD0_RAT	Tek	receptor protein-tyrosine kinase	1	NEDQHIDVK	NEDQHIDVK	2	NEDQHIDVK2	699.882		3106.5
A0A8I6G1P7	A0A8I6G1P7	A0A8I6G1P7_RAT	ENSRNOG00000062657	Ig-like domain-containing protein	1	NEDTATYFCAR	NEDTATYFC(UniMod:4)AR	2	NEDTATYFC(UniMod:4)AR2	162693	192268	206583
A0A8I6G1P7	A0A8I6G1P7	A0A8I6G1P7_RAT	ENSRNOG00000062657	Ig-like domain-containing protein	1	NEDTATYFCAR	NEDTATYFC(UniMod:4)AR	3	NEDTATYFC(UniMod:4)AR3			11669.8
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	NEDVDPMAASAEYELEK	NEDVDPMAASAEYELEK	2	NEDVDPMAASAEYELEK2	5557.07	6937.79	8375.16
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	NEDVLDTESSGR	NEDVLDTESSGR	2	NEDVLDTESSGR2	130645	129587	134746
Q4QQT4	Q4QQT4;Q5XI34	2AAB_RAT	Ppp2r1b	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	0	NEDVQLR	NEDVQLR	2	NEDVQLR2	399126	386246	363924
P31652	P31652	SC6A4_RAT	Slc6a4	Sodium-dependent serotonin transporter	1	NEDVSEVAK	NEDVSEVAK	2	NEDVSEVAK2	63159.4	48253.1	59244.3
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	NEEALKK	NEEALKK	1	NEEALKK1			3577.84
Q9Z158	Q9Z158	STX17_RAT	Stx17	Syntaxin-17	1	NEEALLQPSLTR	NEEALLQPSLTR	2	NEEALLQPSLTR2	15048.7	18288.2	18952.6
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	NEEDATELVTLAQAVNAR	NEEDATELVTLAQAVNAR	2	NEEDATELVTLAQAVNAR2	28170.9	22393.6	22944.9
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	NEEDATELVTLAQAVNAR	NEEDATELVTLAQAVNAR	3	NEEDATELVTLAQAVNAR3	95914.5	107656	97120.7
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	NEEDDMREMEEER	NEEDDMREMEEER	3	NEEDDMREMEEER3	172214	165481	136347
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	NEEEGEKMPR	NEEEGEKMPR	2	NEEEGEKMPR2	112691	89251.7	64958.7
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	NEEEGEKMPR	NEEEGEKMPR	3	NEEEGEKMPR3	668359	501865	501865
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	NEEHCLPCLHGCDK	NEEHC(UniMod:4)LPC(UniMod:4)LHGC(UniMod:4)DK	3	NEEHC(UniMod:4)LPC(UniMod:4)LHGC(UniMod:4)DK3	2341.8	2870.18	4130.78
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	NEEHCLPCLHGCDK	NEEHC(UniMod:4)LPC(UniMod:4)LHGC(UniMod:4)DK	4	NEEHC(UniMod:4)LPC(UniMod:4)LHGC(UniMod:4)DK4	39355.7	28807	28851.3
P04041	P04041	GPX1_RAT	Gpx1	Glutathione peroxidase 1	1	NEEILNSLK	NEEILNSLK	2	NEEILNSLK2	51816.6	51570.3	57629.7
D4ADF6	D4ADF6	D4ADF6_RAT	Zfyve16	Zinc finger FYVE-type containing 16	1	NEEISPNDPTSK	NEEISPNDPTSK	2	NEEISPNDPTSK2	3847.82	3935.2	8791.71
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	NEEIVMPEEQTGLVR	NEEIVMPEEQTGLVR	2	NEEIVMPEEQTGLVR2	10923	11057.5	7379.14
P04466	P04466	MYL11_RAT	Myl11	Myosin regulatory light chain 11	1	NEELDAMMK	NEELDAMMK	2	NEELDAMMK2	7244.79	9425.93	6166.39
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	NEESLSMDYVR	NEESLSMDYVR	2	NEESLSMDYVR2	52076.2	60039.1	59818.8
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	NEESWHDGCR	NEESWHDGC(UniMod:4)R	2	NEESWHDGC(UniMod:4)R2		14802.6	13624.7
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	NEESWHDGCR	NEESWHDGC(UniMod:4)R	3	NEESWHDGC(UniMod:4)R3		46937.8	65710
D3ZKN4	D3ZKN4	D3ZKN4_RAT	Whamm	WASP homolog associated with actin, golgi membranes and microtubules	1	NEETILVTR	NEETILVTR	2	NEETILVTR2	3661.65	4192.18	
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	NEETNQQEVANSLAK	NEETNQQEVANSLAK	2	NEETNQQEVANSLAK2	8644.22	3588.31	6397.77
D4A5K6	D4A5K6	D4A5K6_RAT	Zmpste24	CAAX prenyl protease	1	NEEVLAVLGHELGHWK	NEEVLAVLGHELGHWK	3	NEEVLAVLGHELGHWK3	22814.8	25458.5	33779
D4A5K6	D4A5K6	D4A5K6_RAT	Zmpste24	CAAX prenyl protease	1	NEEVLAVLGHELGHWK	NEEVLAVLGHELGHWK	4	NEEVLAVLGHELGHWK4	36684.8	39031.4	36531.3
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	NEEVPGYTK	NEEVPGYTK	2	NEEVPGYTK2	8966.3	9077.83	12340.9
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	NEEWACK	NEEWAC(UniMod:4)K	2	NEEWAC(UniMod:4)K2	24418.1	26094.9	20959.5
O88658	O88658	KIF1B_RAT	Kif1b	Kinesin-like protein KIF1B	1	NEFLNLVPDIEEVR	NEFLNLVPDIEEVR	2	NEFLNLVPDIEEVR2	12215	15219.2	9550.14
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	NEFNHNFSVSYR	NEFNHNFSVSYR	3	NEFNHNFSVSYR3	11119.8	8851.59	9019.65
O35509	O35509;P62494	RB11B_RAT	Rab11b	Ras-related protein Rab-11B	0	NEFNLESK	NEFNLESK	2	NEFNLESK2	1.21197e+06	1.08111e+06	1.11835e+06
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	NEFQGELQK	NEFQGELQK	2	NEFQGELQK2	96860.8	120822	93177.2
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	NEFSFEDPLQK	NEFSFEDPLQK	2	NEFSFEDPLQK2	176694	174078	179539
Q8R424	Q8R424	STABP_RAT	Stambp	STAM-binding protein	1	NEFTITHVLIPR	NEFTITHVLIPR	3	NEFTITHVLIPR3	2044.78	1470.88	2059.93
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	NEFVGLWLGMAK	NEFVGLWLGMAK	2	NEFVGLWLGMAK2	11828.6	9359.56	10034.3
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	NEFWSPSSEAK	NEFWSPSSEAK	2	NEFWSPSSEAK2	34315.9	28194	32756.3
D4A0J7	D4A0J7	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	1	NEGAWMKDPLAK	NEGAWMKDPLAK	3	NEGAWMKDPLAK3	10928.7	16086.3	14767.1
A0A0G2K652	A0A0G2K652	A0A0G2K652_RAT	Cul9	Cullin 9	1	NEGCLHMTCAR	NEGC(UniMod:4)LHMTC(UniMod:4)AR	3	NEGC(UniMod:4)LHMTC(UniMod:4)AR3		1697.94	5496.74
D3ZU83	D3ZU83	D3ZU83_RAT	Ergic3	Endoplasmic reticulum-Golgi intermediate compartment protein	1	NEGCQVYGFLEVNK	NEGC(UniMod:4)QVYGFLEVNK	2	NEGC(UniMod:4)QVYGFLEVNK2	16210.6	16423.5	8207.25
D3ZU83	D3ZU83	D3ZU83_RAT	Ergic3	Endoplasmic reticulum-Golgi intermediate compartment protein	1	NEGCQVYGFLEVNK	NEGC(UniMod:4)QVYGFLEVNK	3	NEGC(UniMod:4)QVYGFLEVNK3	2390.46		5359.63
D4A5K6	D4A5K6	D4A5K6_RAT	Zmpste24	CAAX prenyl protease	1	NEGEGDSEEVK	NEGEGDSEEVK	2	NEGEGDSEEVK2			6597.78
D4A9Z6	D4A9Z6	D4A9Z6_RAT	Mrps35	Mitochondrial ribosomal protein S35	1	NEGENEASLAQYK	NEGENEASLAQYK	2	NEGENEASLAQYK2	2320.35	3663.07	1566.38
B5DFD1	B5DFD1	B5DFD1_RAT	Nudcd1	NudC domain-containing protein 1	1	NEGLMWPELVVGDK	NEGLMWPELVVGDK	2	NEGLMWPELVVGDK2	14379.9	4779.58	14132
P58751	P58751	RELN_RAT	Reln	Reelin	1	NEGLVVQYSNDNGILWHLLR	NEGLVVQYSNDNGILWHLLR	3	NEGLVVQYSNDNGILWHLLR3	4115.27	4204.98	2538.25
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	NEGMPIYK	NEGMPIYK	2	NEGMPIYK2	88722.8	112133	103096
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	NEGNKPLSLPTIFCNIVLK	NEGNKPLSLPTIFC(UniMod:4)NIVLK	3	NEGNKPLSLPTIFC(UniMod:4)NIVLK3	9407.97	14828.9	10818.8
P97546	P97546	NPTN_RAT	Nptn	Neuroplastin	1	NEGQDAMMYCK	NEGQDAMMYC(UniMod:4)K	2	NEGQDAMMYC(UniMod:4)K2	13681.6	10034.9	14649.5
Q9Z2Q7	Q9Z2Q7	STX8_RAT	Stx8	Syntaxin-8	1	NEGSEPDLIR	NEGSEPDLIR	2	NEGSEPDLIR2	42606.9	53999.5	39108.4
P62961	A0A8I6GL75;P62961;D3ZEV0;A0A8I6ABQ3	YBOX1_RAT	Ybx1	Y-box-binding protein 1	0	NEGSESAPEGQAQQR	NEGSESAPEGQAQQR	2	NEGSESAPEGQAQQR2	9302.72		10723.5
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	NEGTATYAAAVLFR	NEGTATYAAAVLFR	2	NEGTATYAAAVLFR2	6417.88	5813.33	4244.86
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	NEGTATYAAAVLFR	NEGTATYAAAVLFR	3	NEGTATYAAAVLFR3	4298.06	1853.84	2676.99
Q63616	Q63616	VP33B_RAT	Vps33b	Vacuolar protein sorting-associated protein 33B	1	NEHFSNVFGFLSQK	NEHFSNVFGFLSQK	3	NEHFSNVFGFLSQK3	7359.81	11812	9833.96
Q498R3	Q498R3	DJC10_RAT	Dnajc10	DnaJ homolog subfamily C member 10	1	NEHIQVGR	NEHIQVGR	2	NEHIQVGR2	3567.78	1592.7	2810.01
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	NEHNSILQSLLETLK	NEHNSILQSLLETLK	2	NEHNSILQSLLETLK2	11075.8	11236.7	27356.9
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	NEHNSILQSLLETLK	NEHNSILQSLLETLK	3	NEHNSILQSLLETLK3	29480.4	22735.9	22638.4
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	NEIAHLNDVIPYVNSYYWIGIR	NEIAHLNDVIPYVNSYYWIGIR	3	NEIAHLNDVIPYVNSYYWIGIR3	59175.7	78259.4	63261
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	NEIASVAYR	NEIASVAYR	2	NEIASVAYR2	331496	363518	388113
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	NEIDNYEEDYQK	NEIDNYEEDYQK	2	NEIDNYEEDYQK2	111682	106379	103547
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	NEIDNYEEDYQK	NEIDNYEEDYQK	3	NEIDNYEEDYQK3	7685.55		4784.56
P21913	P21913	SDHB_RAT	Sdhb	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial	1	NEIDSTLTFR	NEIDSTLTFR	2	NEIDSTLTFR2	75879.7	71574.2	80452.1
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	NEILCGSSHLCGLLK	NEILC(UniMod:4)GSSHLC(UniMod:4)GLLK	2	NEILC(UniMod:4)GSSHLC(UniMod:4)GLLK2	5969.99	4801.13	3756.82
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	NEILCGSSHLCGLLK	NEILC(UniMod:4)GSSHLC(UniMod:4)GLLK	3	NEILC(UniMod:4)GSSHLC(UniMod:4)GLLK3	131971	113514	98311.6
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	NEILDEVISLSQVTPK	NEILDEVISLSQVTPK	2	NEILDEVISLSQVTPK2	28973.3	41853.2	39344.6
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	NEILDEVISLSQVTPK	NEILDEVISLSQVTPK	3	NEILDEVISLSQVTPK3	37529.5	33775.4	35569.3
B1WBZ6	B1WBZ6	B1WBZ6_RAT	RGD1565685	RGD1565685 protein	1	NEIMHSSEMK	NEIMHSSEMK	3	NEIMHSSEMK3	6513.91	2050.71	5102.9
P62628	P62628	DLRB1_RAT	Dynlrb1	Dynein light chain roadblock-type 1	1	NEIMVAPDK	NEIMVAPDK	2	NEIMVAPDK2	34270.4	52648.7	33432.7
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	NEINIDTLAR	NEINIDTLAR	2	NEINIDTLAR2	80869.9	81154.7	88535.3
P11505	P11505	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	1	NEIPEEALYK	NEIPEEALYK	2	NEIPEEALYK2	40109.9	39282.9	40084.3
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	NEIQSIDR	NEIQSIDR	2	NEIQSIDR2	37309.3	26725	39291.2
A0A8I6A282	A0A8I6A282	A0A8I6A282_RAT	Antxr2	Anthrax toxin receptor	1	NEKPVSVQPGSILCPAPVLNK	NEKPVSVQPGSILC(UniMod:4)PAPVLNK	3	NEKPVSVQPGSILC(UniMod:4)PAPVLNK3	66474.3	51052.6	58085.1
A0A8I6ABZ7	A0A8I6ABZ7	A0A8I6ABZ7_RAT	Dhx9	RNA helicase	1	NELAYQMEQDHNLQSVLQER	NELAYQMEQDHNLQSVLQER	3	NELAYQMEQDHNLQSVLQER3	14266.6	6632.74	9029.78
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	NELESYAYSLK	NELESYAYSLK	2	NELESYAYSLK2	1.94037e+06	1.71143e+06	2.26917e+06
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	NELESYAYSLK	NELESYAYSLK	3	NELESYAYSLK3	40125.2	55485.6	40112.8
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	NELETENR	NELETENR	2	NELETENR2		48128.1	
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	NELFSNL	NELFSNL	1	NELFSNL1	30823.8	32632.7	39006.2
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	NELFSNL	NELFSNL	2	NELFSNL2		7411.8	7232.43
Q66HA6	D3ZPP2;Q66HA6	ARL8B_RAT	Arl8b	ADP-ribosylation factor-like protein 8B	0	NELHNLLDKPQLQGIPVLVLGNK	NELHNLLDKPQLQGIPVLVLGNK	3	NELHNLLDKPQLQGIPVLVLGNK3	261597	305090	322369
Q66HA6	D3ZPP2;Q66HA6	ARL8B_RAT	Arl8b	ADP-ribosylation factor-like protein 8B	0	NELHNLLDKPQLQGIPVLVLGNK	NELHNLLDKPQLQGIPVLVLGNK	4	NELHNLLDKPQLQGIPVLVLGNK4	164256	158503	160862
Q66HA6	D3ZPP2;Q66HA6	ARL8B_RAT	Arl8b	ADP-ribosylation factor-like protein 8B	0	NELHNLLDKPQLQGIPVLVLGNKR	NELHNLLDKPQLQGIPVLVLGNKR	3	NELHNLLDKPQLQGIPVLVLGNKR3	8908.79	10340.2	12007
Q66HA6	D3ZPP2;Q66HA6	ARL8B_RAT	Arl8b	ADP-ribosylation factor-like protein 8B	0	NELHNLLDKPQLQGIPVLVLGNKR	NELHNLLDKPQLQGIPVLVLGNKR	4	NELHNLLDKPQLQGIPVLVLGNKR4	92302.3	92084.9	98242.9
Q5XI23	Q5XI23	Q5XI23_RAT	Mkrn2	RING-type E3 ubiquitin transferase	1	NELIEAFK	NELIEAFK	2	NELIEAFK2	4634.6	5889.96	
A0A8I6ANU2	A0A8I6ANU2	A0A8I6ANU2_RAT	Ptcd3	Pentatricopeptide repeat domain 3	1	NELLEEFMDTAK	NELLEEFMDTAK	2	NELLEEFMDTAK2		8401.8	6060.09
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	NELLEIK	NELLEIK	1	NELLEIK1	8674.32	18454.5	11569.7
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	NELLEIK	NELLEIK	2	NELLEIK2	691186	704529	745448
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	NELLEIKR	NELLEIKR	2	NELLEIKR2	34899.3	31909.4	30664.1
Q5BJT7	Q5BJT7	CCD93_RAT	Ccdc93	Coiled-coil domain-containing protein 93	1	NELLLSK	NELLLSK	2	NELLLSK2	8642.01	17595.9	13198.4
Q5QJC9	Q5QJC9	BAG5_RAT	Bag5	BAG family molecular chaperone regulator 5	1	NELLQAQSPPELYLR	NELLQAQSPPELYLR	2	NELLQAQSPPELYLR2	7690.15	10747.9	15251
Q5QJC9	Q5QJC9	BAG5_RAT	Bag5	BAG family molecular chaperone regulator 5	1	NELLQAQSPPELYLR	NELLQAQSPPELYLR	3	NELLQAQSPPELYLR3		3325.69	
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	NELLQLLQLK	NELLQLLQLK	2	NELLQLLQLK2	5454.46	9787.29	10129.5
A0A8I5ZQH9	A0A8I5ZQH9	A0A8I5ZQH9_RAT	Dcaf6	DDB1 and CUL4 associated factor 6	1	NELMLEETR	NELMLEETR	2	NELMLEETR2	10324.6	9032.23	5350.83
D4A0G9	D4A0G9	D4A0G9_RAT	Ercc6l	ERCC excision repair 6 like, spindle assembly checkpoint helicase	1	NELQASPGQEALSENLGSFHYLPR	NELQASPGQEALSENLGSFHYLPR	3	NELQASPGQEALSENLGSFHYLPR3	9828.89	14986.9	14434.6
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	NELQLVDLPTGR	NELQLVDLPTGR	2	NELQLVDLPTGR2	22943.7	23946.1	22413.9
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	NELQMQLASK	NELQMQLASK	2	NELQMQLASK2		26597	26463.1
G3V8Y8	G3V8Y8	G3V8Y8_RAT	Hip1	Huntingtin interacting protein 1	1	NELSDMSR	NELSDMSR	2	NELSDMSR2	9502.03	4106.84	5135.01
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	NELSDMTR	NELSDMTR	2	NELSDMTR2	9086.85	12680.2	12507.7
Q5XHY5	Q5XHY5	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	1	NELSGALTGLTR	NELSGALTGLTR	2	NELSGALTGLTR2	20877	15360.6	27474.7
A0A8I6AAW1	A0A8I6AAW1	A0A8I6AAW1_RAT	Tars3	threonine--tRNA ligase	1	NELSGTLTGLTR	NELSGTLTGLTR	2	NELSGTLTGLTR2		4154.22	1771.02
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	NEMNKDLENVK	NEMNKDLENVK	2	NEMNKDLENVK2	9788.79	9253.64	6291.36
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	NEMNKDLENVK	NEMNKDLENVK	3	NEMNKDLENVK3	70329.4	83198.4	62953.1
E9PU15	E9PU15	E9PU15_RAT	Dicer1	Endoribonuclease Dicer	1	NEMQGMDSELR	NEMQGMDSELR	2	NEMQGMDSELR2	2822.29	2557.72	2729.37
D4A9N5	D4A9N5	D4A9N5_RAT	Trim25	Tripartite motif-containing 25	1	NEMQNLK	NEMQNLK	2	NEMQNLK2	7781.15	11400.7	12274.9
P14056	P14056	ARAF_RAT	Araf	Serine/threonine-protein kinase A-Raf	1	NEMQVLR	NEMQVLR	2	NEMQVLR2		39358.2	
A0A8J8YFS5	A0A8I6ALV4;A0A8J8YFS5	A0A8J8YFS5_RAT	Hars1	Histidine--tRNA ligase, cytoplasmic	0	NEMVGEK	NEMVGEK	2	NEMVGEK2	15469.4	20316.2	
Q498R3	Q498R3	DJC10_RAT	Dnajc10	DnaJ homolog subfamily C member 10	1	NENANDPELK	NENANDPELK	2	NENANDPELK2	3637.29		
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	NENCSVNYTTDFIYQLYSEEGK	NENC(UniMod:4)SVNYTTDFIYQLYSEEGK	3	NENC(UniMod:4)SVNYTTDFIYQLYSEEGK3	22112	25902.2	28663.8
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	NENDAIPAK	NENDAIPAK	2	NENDAIPAK2	8572.16		7333.46
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	NENGEYNLSGTK	NENGEYNLSGTK	2	NENGEYNLSGTK2	16333	13171.3	17514.1
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	NENGEYNLSGTKR	NENGEYNLSGTKR	3	NENGEYNLSGTKR3	2197.93	3255.25	
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	NENLLDVNQK	NENLLDVNQK	2	NENLLDVNQK2	8072.58	8140.46	9713.23
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	NENLQAWFR	NENLQAWFR	2	NENLQAWFR2	27586.3	31734	30074.7
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	NENPYPAVAMHK	NENPYPAVAMHK	3	NENPYPAVAMHK3	21820.2	16125.5	16260.4
D3ZM03	D3ZM03	D3ZM03_RAT	Vma21	Vacuolar ATPase assembly integral membrane protein VMA21	1	NENSLAATLK	NENSLAATLK	2	NENSLAATLK2	5488.63	5367.15	7811.92
A0A0G2K542	A0A0G2K542	A0A0G2K542_RAT	Ugp2	UTP--glucose-1-phosphate uridylyltransferase	1	NENTFLDLTVQQIEHLNK	NENTFLDLTVQQIEHLNK	3	NENTFLDLTVQQIEHLNK3	25821.2	9052.67	9749.89
B0BNK1	B0BNK1	B0BNK1_RAT	Rab5c	RAB5C, member RAS oncogene family	1	NEPQNAAGAPGR	NEPQNAAGAPGR	2	NEPQNAAGAPGR2	100340		98260.9
M0RC99	M0RC99	RAB5A_RAT	Rab5a	Ras-related protein Rab-5A	1	NEPQNPGANSAR	NEPQNPGANSAR	2	NEPQNPGANSAR2			26001.8
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	NEQELQSACDALK	NEQELQSAC(UniMod:4)DALK	2	NEQELQSAC(UniMod:4)DALK2	2562.03	1527.26	2821.53
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	NEQELQSACDALKEENSK	NEQELQSAC(UniMod:4)DALKEENSK	3	NEQELQSAC(UniMod:4)DALKEENSK3	7936.56	19096.8	9590.19
F7F0H6	F7F0H6	F7F0H6_RAT	Ifgga2l1	Similar to interferon-inducible GTPase	1	NEQHQDLASSFK	NEQHQDLASSFK	2	NEQHQDLASSFK2	2880.38		
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	NEQLESEMQNLK	NEQLESEMQNLK	2	NEQLESEMQNLK2	12973.4	11488.4	9638.8
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	NEQLESEMQNLKR	NEQLESEMQNLKR	3	NEQLESEMQNLKR3	15915.4	14163.6	4664.68
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	NEQLICANENGDCDQYCR	NEQLIC(UniMod:4)ANENGDC(UniMod:4)DQYC(UniMod:4)R	3	NEQLIC(UniMod:4)ANENGDC(UniMod:4)DQYC(UniMod:4)R3	142323	149088	141995
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	NEQPVLVLTQWLPALPTAELR	NEQPVLVLTQWLPALPTAELR	3	NEQPVLVLTQWLPALPTAELR3	15797.6		1418.98
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	NEQRENELIISFLR	NEQRENELIISFLR	3	NEQRENELIISFLR3	3901.02	8971.79	5442.54
P01026	P01026	CO3_RAT	C3	Complement C3	1	NEQVEIR	NEQVEIR	1	NEQVEIR1	9827.25	6879.23	4994.99
P01026	P01026	CO3_RAT	C3	Complement C3	1	NEQVEIR	NEQVEIR	2	NEQVEIR2	2.03226e+06	2.04071e+06	1.8953e+06
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	NEQYNMGMVGTHGLETSHADTFGGSISR	NEQYNMGMVGTHGLETSHADTFGGSISR	4	NEQYNMGMVGTHGLETSHADTFGGSISR4	54217.3	45464.1	41324.4
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	NESCGGAYGLHGACDR	NESC(UniMod:4)GGAYGLHGAC(UniMod:4)DR	3	NESC(UniMod:4)GGAYGLHGAC(UniMod:4)DR3	15313.1	19169.3	9170.05
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	NESCQDETPSAAAQR	NESC(UniMod:4)QDETPSAAAQR	2	NESC(UniMod:4)QDETPSAAAQR2	18736.4	21428.3	14878.2
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	NESCQDETPSAAAQR	NESC(UniMod:4)QDETPSAAAQR	3	NESC(UniMod:4)QDETPSAAAQR3	5010.8	10425.4	8487.68
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	NESELEAHLCR	NESELEAHLC(UniMod:4)R	2	NESELEAHLC(UniMod:4)R2	11974.4	8137.09	10626.4
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	NESELEAHLCR	NESELEAHLC(UniMod:4)R	3	NESELEAHLC(UniMod:4)R3	56832.5	58187.9	59768.3
Q63787	Q63787	P85A_RAT	Pik3r1	Phosphatidylinositol 3-kinase regulatory subunit alpha	1	NESLAQYNPK	NESLAQYNPK	2	NESLAQYNPK2	4877.56	6558.35	
A0A0G2K0I6	A0A0G2K0I6	A0A0G2K0I6_RAT	Cdh5	Cadherin 5	1	NESLPHYVGK	NESLPHYVGK	3	NESLPHYVGK3	17664.6	18669	19290
Q499P8	Q499P8	RUSF1_RAT	Rusf1	RUS family member 1	1	NESWILVR	NESWILVR	2	NESWILVR2	16658.7	15772.8	17509.9
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	NETDEDGWTTVR	NETDEDGWTTVR	2	NETDEDGWTTVR2	69157.2	67473.8	62792.2
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	NETDEDGWTTVRR	NETDEDGWTTVRR	3	NETDEDGWTTVRR3	22356	16799.2	34574.1
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	NETELSLVLSHCTGTTDGAIADK	NETELSLVLSHC(UniMod:4)TGTTDGAIADK	3	NETELSLVLSHC(UniMod:4)TGTTDGAIADK3	11132.3	11780.3	5054.58
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	NETETAEER	NETETAEER	2	NETETAEER2			3554.96
P16446	P16446	PIPNA_RAT	Pitpna	Phosphatidylinositol transfer protein alpha isoform	1	NETGGGEGVEVLVNEPYEK	NETGGGEGVEVLVNEPYEK	3	NETGGGEGVEVLVNEPYEK3	2841.76		
P16446	P16446	PIPNA_RAT	Pitpna	Phosphatidylinositol transfer protein alpha isoform	1	NETGGGEGVEVLVNEPYEKDDGEK	NETGGGEGVEVLVNEPYEKDDGEK	3	NETGGGEGVEVLVNEPYEKDDGEK3	4370.89	4544.08	
Q5RJR2	Q5RJR2;A0A8I6GGS8	TWF1_RAT	Twf1	Twinfilin-1	0	NETIILANTENTELK	NETIILANTENTELK	2	NETIILANTENTELK2	16788.2	14173.7	12128
Q5RJR2	Q5RJR2;A0A8I6GGS8	TWF1_RAT	Twf1	Twinfilin-1	0	NETIILANTENTELKDLPK	NETIILANTENTELKDLPK	3	NETIILANTENTELKDLPK3	39646.5	36426.4	36884.3
Q6P6R2	Q6P6R2	DLDH_RAT	Dld	Dihydrolipoyl dehydrogenase, mitochondrial	1	NETLGGTCLNVGCIPSK	NETLGGTC(UniMod:4)LNVGC(UniMod:4)IPSK	2	NETLGGTC(UniMod:4)LNVGC(UniMod:4)IPSK2	35457.5	38264.7	40976.7
Q6P6R2	Q6P6R2	DLDH_RAT	Dld	Dihydrolipoyl dehydrogenase, mitochondrial	1	NETLGGTCLNVGCIPSK	NETLGGTC(UniMod:4)LNVGC(UniMod:4)IPSK	3	NETLGGTC(UniMod:4)LNVGC(UniMod:4)IPSK3	26623.7	24234.9	28192.3
Q5XIS9	Q5XIS9	KPCD2_RAT	Prkd2	Serine/threonine-protein kinase D2	1	NEVAILQSLR	NEVAILQSLR	2	NEVAILQSLR2	5511.66	5129.27	4561.33
Q6AY20	Q6AY20;A0A8I6A547	MPRD_RAT	M6pr	Cation-dependent mannose-6-phosphate receptor	0	NEVALLER	NEVALLER	2	NEVALLER2	295688	252471	297891
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	NEVDMQVLHLLGPK	NEVDMQVLHLLGPK	2	NEVDMQVLHLLGPK2	8037.72	8466.48	
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	NEVDMQVLHLLGPK	NEVDMQVLHLLGPK	3	NEVDMQVLHLLGPK3	38507.8	42878.1	45967.5
A0A0G2JTX7	A0A0G2JTX7	A0A0G2JTX7_RAT	Col6a5	Collagen type VI alpha 5 chain	1	NEVEFPVSQYTK	NEVEFPVSQYTK	2	NEVEFPVSQYTK2	5053.25	5912.8	
Q32Q06	Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	1	NEVFLDVIEAVNLLVSANGNVLR	NEVFLDVIEAVNLLVSANGNVLR	3	NEVFLDVIEAVNLLVSANGNVLR3	5316.42		
A0A8I6ATH0	A0A8I6ATH0	A0A8I6ATH0_RAT	Braf	non-specific serine/threonine protein kinase	1	NEVGVLR	NEVGVLR	2	NEVGVLR2	39802.2	24255.2	33572.8
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	NEVLEDHVQNNAEQLGAFAAGVK	NEVLEDHVQNNAEQLGAFAAGVK	3	NEVLEDHVQNNAEQLGAFAAGVK3	7222.71	6831.46	4399.48
P81795	C9WPN6;P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	0	NEVLMVNIGSLSTGGR	NEVLMVNIGSLSTGGR	2	NEVLMVNIGSLSTGGR2	60519.9	68368.3	44413.5
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	NEVNTMLGQSTEELR	NEVNTMLGQSTEELR	2	NEVNTMLGQSTEELR2	341395	337558	321255
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	NEVNTMLGQSTEELR	NEVNTMLGQSTEELR	3	NEVNTMLGQSTEELR3	39851.3	43036.8	41368.4
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	NEVNTMLGQSTEELRSR	NEVNTMLGQSTEELRSR	3	NEVNTMLGQSTEELRSR3	60885.2	81220.7	81066.6
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	NEVNVPCLK	NEVNVPC(UniMod:4)LK	2	NEVNVPC(UniMod:4)LK2	74743.2	57701.9	48740.2
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	NEVNVPCLR	NEVNVPC(UniMod:4)LR	2	NEVNVPC(UniMod:4)LR2	90907.8	99775.8	80074
A4V8B4	A4V8B4	SAV1_RAT	Sav1	Protein salvador homolog 1	1	NEVSKPAEVQGK	NEVSKPAEVQGK	2	NEVSKPAEVQGK2	3.45476e+06		4.07144e+06
A4V8B4	A4V8B4	SAV1_RAT	Sav1	Protein salvador homolog 1	1	NEVSKPAEVQGK	NEVSKPAEVQGK	3	NEVSKPAEVQGK3	65446		87798.8
F7FQB8	F7FQB8	F7FQB8_RAT	Kpna4	Karyopherin subunit alpha 4	1	NEVVVELR	NEVVVELR	2	NEVVVELR2	94482.8	104484	86527.2
F7FQB8	F7FQB8	F7FQB8_RAT	Kpna4	Karyopherin subunit alpha 4	1	NEVVVELRK	NEVVVELRK	2	NEVVVELRK2	3178.27	5598.53	4899.38
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	NEWGSLLEELVK	NEWGSLLEELVK	2	NEWGSLLEELVK2	12847.4	8605.89	8882.49
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	NEWMQALQQAVVEHR	NEWMQALQQAVVEHR	3	NEWMQALQQAVVEHR3	28479.2	28788.9	21572.6
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	NEYAAQLQNFNGEQHK	NEYAAQLQNFNGEQHK	2	NEYAAQLQNFNGEQHK2	14679.1	7143.83	8140.96
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	NEYAAQLQNFNGEQHK	NEYAAQLQNFNGEQHK	3	NEYAAQLQNFNGEQHK3	101103	106581	110924
P97531	P97531	CIP4_RAT	Trip10	Cdc42-interacting protein 4	1	NEYAAQLQR	NEYAAQLQR	2	NEYAAQLQR2	9554.92	10671.6	9503.42
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	NEYGELESNK	NEYGELESNK	2	NEYGELESNK2	24350.9	17616.5	14277.8
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	NEYLLALEATNASVFK	NEYLLALEATNASVFK	2	NEYLLALEATNASVFK2	2741.38		6181.9
Q3ZAU6	Q3ZAU6	Q3ZAU6_RAT	Rnf14	RBR-type E3 ubiquitin transferase	1	NEYLQADEATK	NEYLQADEATK	2	NEYLQADEATK2	29198.5	45644.6	39862.3
Q3ZAU6	Q3ZAU6	Q3ZAU6_RAT	Rnf14	RBR-type E3 ubiquitin transferase	1	NEYLQADEATKR	NEYLQADEATKR	2	NEYLQADEATKR2	2902.91	2497.15	1286.06
Q3ZAU6	Q3ZAU6	Q3ZAU6_RAT	Rnf14	RBR-type E3 ubiquitin transferase	1	NEYLQADEATKR	NEYLQADEATKR	3	NEYLQADEATKR3	14660.8	17371.1	15981.4
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	NEYVFNQLLQCK	NEYVFNQLLQC(UniMod:4)K	2	NEYVFNQLLQC(UniMod:4)K2	22679	35370.8	38714.8
Q9WV75	Q9WV75	SPON2_RAT	Spon2	Spondin-2	1	NEYVSNGLR	NEYVSNGLR	2	NEYVSNGLR2	7009.27	1889.08	3687.39
Q8VID1	Q8VID1	DHRS4_RAT	Dhrs4	Dehydrogenase/reductase SDR family member 4	1	NFAAELAPK	NFAAELAPK	2	NFAAELAPK2	18740.8	17485.1	33831.6
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	NFAATQFEPLAAR	NFAATQFEPLAAR	2	NFAATQFEPLAAR2	25041.6	22143.6	23876.7
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	NFAEPGSNVYLR	NFAEPGSNVYLR	2	NFAEPGSNVYLR2	40965.2	26268.8	17384.6
P13264	P13264	GLSK_RAT	Gls	Glutaminase kidney isoform, mitochondrial	1	NFAIGYYLK	NFAIGYYLK	2	NFAIGYYLK2	26205.5	16168.9	21802.6
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	NFALLGVGTGR	NFALLGVGTGR	2	NFALLGVGTGR2	53871.3	57556.2	56778.7
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	NFAMIGLGCGEGGEVVVTDMDTIEK	NFAMIGLGC(UniMod:4)GEGGEVVVTDMDTIEK	3	NFAMIGLGC(UniMod:4)GEGGEVVVTDMDTIEK3	17130	16113.9	17028.2
A0A0G2K427	A0A0G2K427	A0A0G2K427_RAT	Ivns1abp	Influenza virus NS1A binding protein	1	NFASCMGDSR	NFASC(UniMod:4)MGDSR	2	NFASC(UniMod:4)MGDSR2	6315.41	11286.2	
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	NFASRPYTFHAHGVTYTK	NFASRPYTFHAHGVTYTK	3	NFASRPYTFHAHGVTYTK3	6743.5	3102.88	1320.37
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	NFASRPYTFHAHGVTYTK	NFASRPYTFHAHGVTYTK	4	NFASRPYTFHAHGVTYTK4	31325.7	25986.1	25176.2
P14668	P14668	ANXA5_RAT	Anxa5	Annexin A5	1	NFATSLYSMIK	NFATSLYSMIK	2	NFATSLYSMIK2	5835.69		2775.01
A0A0U1RRV5	A0A0U1RRV5	A0A0U1RRV5_RAT	Cluh	Clustered mitochondria protein homolog	1	NFAVLQK	NFAVLQK	2	NFAVLQK2			4422.54
Q8CIN9	Q8CIN9	RFFL_RAT	Rffl	E3 ubiquitin-protein ligase rififylin	1	NFCMTCSSQEGNGPR	NFC(UniMod:4)MTC(UniMod:4)SSQEGNGPR	2	NFC(UniMod:4)MTC(UniMod:4)SSQEGNGPR2	2782.13	5294.27	3157.69
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	NFCPPNHWLSEQEDIK	NFC(UniMod:4)PPNHWLSEQEDIK	3	NFC(UniMod:4)PPNHWLSEQEDIK3	35638.5	60311.5	40546.7
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	NFDDAFLPVLKPHLER	NFDDAFLPVLKPHLER	3	NFDDAFLPVLKPHLER3	5948	6156.03	2618.58
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	NFDDAFLPVLKPHLER	NFDDAFLPVLKPHLER	4	NFDDAFLPVLKPHLER4	37055.9	31045.5	38450.8
D3ZRX9	D3ZRX9	D3ZRX9_RAT	Cnn2	Calponin	1	NFDDATMK	NFDDATMK	1	NFDDATMK1	11866	11658.6	15349.2
D3ZRX9	D3ZRX9	D3ZRX9_RAT	Cnn2	Calponin	1	NFDDATMK	NFDDATMK	2	NFDDATMK2	830143	875937	868387
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	NFDDEDSVDGNRPSSASSSSSK	NFDDEDSVDGNRPSSASSSSSK	3	NFDDEDSVDGNRPSSASSSSSK3	4031.57	9584.68	
D3ZJF9	D3ZJF9	D3ZJF9_RAT	Gla	Alpha-galactosidase	1	NFDDVYDSWESIK	NFDDVYDSWESIK	2	NFDDVYDSWESIK2	27152.4	26109.9	13431.3
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	NFDEAIVVDAASLDPESLYQR	NFDEAIVVDAASLDPESLYQR	3	NFDEAIVVDAASLDPESLYQR3	7958.82	4012.13	7553.55
O35244	A0A8I6ASU0;O35244	PRDX6_RAT	Prdx6	Peroxiredoxin-6	0	NFDEILR	NFDEILR	2	NFDEILR2	47657.2	42876.8	49462.6
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	NFDFEDVFVNIPR	NFDFEDVFVNIPR	2	NFDFEDVFVNIPR2	17277.9	16992	17130
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	NFDFEDVFVNIPR	NFDFEDVFVNIPR	3	NFDFEDVFVNIPR3	9696.83	15888.7	8350.2
P13444	P13444	METK1_RAT	Mat1a	S-adenosylmethionine synthase isoform type-1	1	NFDLRPGVIVR	NFDLRPGVIVR	3	NFDLRPGVIVR3	8883.96	8632.3	
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	NFDPPIEEFNDPYQQLVTTLIK	NFDPPIEEFNDPYQQLVTTLIK	3	NFDPPIEEFNDPYQQLVTTLIK3	11555.5	7310.15	5197.03
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	NFDVDGDGHISQEEFQIIR	NFDVDGDGHISQEEFQIIR	3	NFDVDGDGHISQEEFQIIR3	232911	231481	260174
P38062	P38062	MAP2_RAT	Metap2	Methionine aminopeptidase 2	1	NFDVGHVPIR	NFDVGHVPIR	2	NFDVGHVPIR2			2801.66
P38062	P38062	MAP2_RAT	Metap2	Methionine aminopeptidase 2	1	NFDVGHVPIR	NFDVGHVPIR	3	NFDVGHVPIR3	48852	41597.9	51734.1
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	NFDYHVLHVAEDVIK	NFDYHVLHVAEDVIK	2	NFDYHVLHVAEDVIK2	13703.3	9941.62	14673.5
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	NFDYHVLHVAEDVIK	NFDYHVLHVAEDVIK	3	NFDYHVLHVAEDVIK3	244230	229867	256021
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	NFDYHVLHVAEDVIK	NFDYHVLHVAEDVIK	4	NFDYHVLHVAEDVIK4	60831.9	65173.5	68521.1
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	NFEASLDWLQEHACSR	NFEASLDWLQEHAC(UniMod:4)SR	3	NFEASLDWLQEHAC(UniMod:4)SR3	6159.7	4393.56	14098
A0A8J8YGQ6	A0A8J8YGQ6	A0A8J8YGQ6_RAT	Dhrsx	Dehydrogenase/reductase X-linked	1	NFEATALPLHLLINNAGVMLDPSGNTK	NFEATALPLHLLINNAGVMLDPSGNTK	3	NFEATALPLHLLINNAGVMLDPSGNTK3	6948.92	7534.19	11489.5
A0A8I5ZYN9	A0A8I5ZYN9	A0A8I5ZYN9_RAT	Ipo11-ps1	Similar to importin 11	1	NFEDSSPETLEAHK	NFEDSSPETLEAHK	3	NFEDSSPETLEAHK3	10118.2	12881.3	16954.9
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	NFEEVAFDEK	NFEEVAFDEK	2	NFEEVAFDEK2	599250	647344	673491
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	NFEEVAFDEKK	NFEEVAFDEKK	2	NFEEVAFDEKK2	118369	122469	114911
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	NFEEVAFDEKK	NFEEVAFDEKK	3	NFEEVAFDEKK3	212596	264865	281436
Q6P6Q9	Q6P6Q9	MICU1_RAT	Micu1	Calcium uptake protein 1, mitochondrial	1	NFEIAFK	NFEIAFK	2	NFEIAFK2	45428.2	50454	56954.5
P08650	P08650	CO5_RAT	C5	Complement C5	1	NFEITVK	NFEITVK	1	NFEITVK1	3726.57	4505.92	
B1WBY7	B1WBY7	B1WBY7_RAT	Erlin1	Erlin	1	NFELMEAEK	NFELMEAEK	2	NFELMEAEK2	23303.7	16839.2	16981
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	NFENLIPDAPELIHDFLVNEK	NFENLIPDAPELIHDFLVNEK	3	NFENLIPDAPELIHDFLVNEK3	43110.2	7336.68	
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	NFESLSEAFSVASAAAALSQNR	NFESLSEAFSVASAAAALSQNR	3	NFESLSEAFSVASAAAALSQNR3	24554.3	27305	34363
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	NFETGVGK	NFETGVGK	2	NFETGVGK2	32806.2	33677.6	40366.3
P51583	P51583;A0A0G2K5S4	PUR6_RAT	Paics	Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase	0	NFEWVADR	NFEWVADR	2	NFEWVADR2	38813.7	27598.8	25803
P51583	P51583;A0A0G2K5S4	PUR6_RAT	Paics	Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase	0	NFEWVADRVELLLK	NFEWVADRVELLLK	3	NFEWVADRVELLLK3	35792.4	20934.2	49230.8
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	NFFLTTR	NFFLTTR	2	NFFLTTR2	4.09372e+06	4.79533e+06	5.19824e+06
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	NFFNPPIISR	NFFNPPIISR	2	NFFNPPIISR2	1.3015e+07	1.50575e+07	1.36112e+07
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	NFFNPPIISR	NFFNPPIISR	3	NFFNPPIISR3	10640.1	11228.3	14340.4
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	NFFQALDNLPNLQNLDISR	NFFQALDNLPNLQNLDISR	3	NFFQALDNLPNLQNLDISR3	10270.5	2024.33	10743.2
Q5M890	Q5M890	Q5M890_RAT	Apon	Apolipoprotein N	1	NFFQTYFG	NFFQTYFG	2	NFFQTYFG2	4597.51	3213.89	2699.86
D3ZVF4	D3ZVF4;Q5BJL8	TPC2B_RAT	Trappc2b	Trafficking protein particle complex subunit 2B	0	NFFTDVYDLYIK	NFFTDVYDLYIK	2	NFFTDVYDLYIK2	6759.13	4970.86	5904.24
Q10473	Q10473	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	1	NFFYIISPGVTK	NFFYIISPGVTK	2	NFFYIISPGVTK2	86912.7	110424	97203.4
Q9EPH8	Q9EPH8	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	1	NFGEDMDDER	NFGEDMDDER	2	NFGEDMDDER2	23194.8	34876.2	31735.8
Q9EPH8	Q9EPH8	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	1	NFGEDMDDERLK	NFGEDMDDERLK	3	NFGEDMDDERLK3	11660.1	10405.8	17902.3
Q4G063	Q4G063	CREL2_RAT	Creld2	Protein disulfide isomerase Creld2	1	NFGGGNTAWEEK	NFGGGNTAWEEK	2	NFGGGNTAWEEK2	120824	119321	104423
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	NFGGLLGPLDEPVAMQR	NFGGLLGPLDEPVAMQR	2	NFGGLLGPLDEPVAMQR2	124390	133864	130009
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	NFGGLLGPLDEPVAMQR	NFGGLLGPLDEPVAMQR	3	NFGGLLGPLDEPVAMQR3	29249.5	46050.6	40806.4
P62425	F1M1M2;P62425;F1M4C7;A0A8I6AUG1;M0R3M3;D3ZU22;D3ZJH5;A0A8I6AMN7;D3ZPL5;D3ZNA3;D4A6B9	RL7A_RAT	Rpl7a	Large ribosomal subunit protein eL8	0	NFGIGQDIQPK	NFGIGQDIQPK	2	NFGIGQDIQPK2	50339.7	43314.2	35068.9
P62718	P62718;F1M0K6	RL18A_RAT	Rpl18a	Large ribosomal subunit protein eL20	0	NFGIWLR	NFGIWLR	2	NFGIWLR2	40889.9	42787.9	40645.9
P13221	P13221	AATC_RAT	Got1	Aspartate aminotransferase, cytoplasmic	1	NFGLYNER	NFGLYNER	2	NFGLYNER2	25761.3	15346.4	20317
Q78P75	P63170;Q78P75	DYL2_RAT	Dynll2	Dynein light chain 2, cytoplasmic	0	NFGSYVTHETK	NFGSYVTHETK	2	NFGSYVTHETK2	20420.5	18425	14781
Q78P75	P63170;Q78P75	DYL2_RAT	Dynll2	Dynein light chain 2, cytoplasmic	0	NFGSYVTHETK	NFGSYVTHETK	3	NFGSYVTHETK3	35141.1	35835.6	48308
Q78P75	P63170;Q78P75	DYL2_RAT	Dynll2	Dynein light chain 2, cytoplasmic	0	NFGSYVTHETKHFIYFYLGQVAILLFK	NFGSYVTHETKHFIYFYLGQVAILLFK	4	NFGSYVTHETKHFIYFYLGQVAILLFK4		779.264	5693.69
Q9JHW1	Q9JHW1	CBPD_RAT	Cpd	Carboxypeptidase D	1	NFGTDPEVTDLVR	NFGTDPEVTDLVR	2	NFGTDPEVTDLVR2	11801.2	8828.88	
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	NFGYTLQSVNDLYIQK	NFGYTLQSVNDLYIQK	2	NFGYTLQSVNDLYIQK2	373240	435271	397764
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	NFGYTLQSVNDLYIQK	NFGYTLQSVNDLYIQK	3	NFGYTLQSVNDLYIQK3	314627	303087	297449
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	NFHAFYQLLR	NFHAFYQLLR	2	NFHAFYQLLR2	9152.82	17872.1	17269.3
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	NFHAFYQLLR	NFHAFYQLLR	3	NFHAFYQLLR3	48754.6	56065.1	46912.9
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	NFHCWDYR	NFHC(UniMod:4)WDYR	3	NFHC(UniMod:4)WDYR3		3575.86	
F7EYC4	F7EYC4	F7EYC4_RAT	Tom1	Target of myb1 membrane trafficking protein	1	NFHEVMLALTVLETCVK	NFHEVMLALTVLETC(UniMod:4)VK	3	NFHEVMLALTVLETC(UniMod:4)VK3	13588.6	13321.4	14096.3
P0C2X9	P0C2X9	AL4A1_RAT	Aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1	NFHFVHSSADVDSVVSGTLR	NFHFVHSSADVDSVVSGTLR	3	NFHFVHSSADVDSVVSGTLR3	25133.9	17711.6	22476.1
P0C2X9	P0C2X9	AL4A1_RAT	Aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1	NFHFVHSSADVDSVVSGTLR	NFHFVHSSADVDSVVSGTLR	4	NFHFVHSSADVDSVVSGTLR4	28029.9	28853.2	32254.2
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	NFHQLLLNPPK	NFHQLLLNPPK	3	NFHQLLLNPPK3	22445.3	25075.2	14079.1
Q02769	Q02769	FDFT_RAT	Fdft1	Squalene synthase	1	NFHTFLYEPEWR	NFHTFLYEPEWR	3	NFHTFLYEPEWR3	15000.1	17631.4	7897.41
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	NFHVFLEYDQDLSVR	NFHVFLEYDQDLSVR	3	NFHVFLEYDQDLSVR3		1773.66	
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	NFHVFYQLLEGGEEEALR	NFHVFYQLLEGGEEEALR	3	NFHVFYQLLEGGEEEALR3	32630.6	36549.6	30877.3
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	NFHVFYQLLEGGEEEALRR	NFHVFYQLLEGGEEEALRR	3	NFHVFYQLLEGGEEEALRR3	48355.8	46953.4	53746.3
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	NFHVFYQLLEGGEEEALRR	NFHVFYQLLEGGEEEALRR	4	NFHVFYQLLEGGEEEALRR4	198885	237328	225089
Q05096	Q05096	MYO1B_RAT	Myo1b	Unconventional myosin-Ib	1	NFHVFYQLLSGASEELLHK	NFHVFYQLLSGASEELLHK	3	NFHVFYQLLSGASEELLHK3	8022.65	3042.66	1217.28
Q05096	Q05096	MYO1B_RAT	Myo1b	Unconventional myosin-Ib	1	NFHVFYQLLSGASEELLHK	NFHVFYQLLSGASEELLHK	4	NFHVFYQLLSGASEELLHK4	4520.1	3795.52	5491.49
Q6AYE2	Q6AYE2	SHLB1_RAT	Sh3glb1	Endophilin-B1	1	NFIEGDYK	NFIEGDYK	2	NFIEGDYK2	62406.1	59953.7	63194.2
D3ZSG2	D3ZSG2	D3ZSG2_RAT	Trank1	Tetratricopeptide repeat and ankyrin repeat containing 1	1	NFIELSK	NFIELSK	2	NFIELSK2	33191.8	294279	
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	NFIETHK	NFIETHK	2	NFIETHK2	77303.3	69518.9	76752.3
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	NFIGDYIGMEEHPELQQFVGK	NFIGDYIGMEEHPELQQFVGK	3	NFIGDYIGMEEHPELQQFVGK3	39406.1	50038.1	38373.6
P06760	P06760	BGLR_RAT	Gusb	Beta-glucuronidase	1	NFIGWVWYER	NFIGWVWYER	2	NFIGWVWYER2	10645.6	5607.08	7806.53
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	NFIQYFHK	NFIQYFHK	2	NFIQYFHK2	60083.4	75604.5	46539.6
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	NFITAEELR	NFITAEELR	2	NFITAEELR2	1.06903e+06	1.15987e+06	1.09633e+06
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	NFITAEELRR	NFITAEELRR	3	NFITAEELRR3	101511	159327	161394
P62815	P62815	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	1	NFITQGPYENR	NFITQGPYENR	2	NFITQGPYENR2	64778.9	53245.3	57536
F7EMB2	F7EMB2	F7EMB2_RAT	Rtraf	RNA transcription, translation and transport factor protein	1	NFIVWLEDQK	NFIVWLEDQK	2	NFIVWLEDQK2	15395.3	13798.9	13790.2
O70351	O70351	HCD2_RAT	Hsd17b10	3-hydroxyacyl-CoA dehydrogenase type-2	1	NFLASQVPFPSR	NFLASQVPFPSR	2	NFLASQVPFPSR2	202137	213273	214277
M0RA86	M0RA86	M0RA86_RAT	Ccdc9	Coiled-coil domain containing 9	1	NFLDDPR	NFLDDPR	2	NFLDDPR2	10127.3	8555.42	6311.05
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	NFLDLISSSGR	NFLDLISSSGR	2	NFLDLISSSGR2	930544	991237	942312
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	NFLDLISSSGR	NFLDLISSSGR	3	NFLDLISSSGR3		2880.24	4985.57
Q6P6Q9	Q6P6Q9	MICU1_RAT	Micu1	Calcium uptake protein 1, mitochondrial	1	NFLEFQR	NFLEFQR	2	NFLEFQR2	97430.5	84380.5	82710.5
Q5PPJ9	Q5PPJ9	SHLB2_RAT	Sh3glb2	Endophilin-B2	1	NFLEGDWK	NFLEGDWK	2	NFLEGDWK2	32873.8	21690.6	34064.1
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	NFLELTELK	NFLELTELK	2	NFLELTELK2	94717.4	87213.7	94560.1
A0A8I5ZT44	A0A8I5ZT44	A0A8I5ZT44_RAT	Tlcd3a	TLC domain containing 3A	1	NFLIENR	NFLIENR	2	NFLIENR2	85287.4	69331.5	70451.7
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	NFLINYYNR	NFLINYYNR	2	NFLINYYNR2	160408	169205	164065
Q63377	A0A8I6AFS5;Q63377	AT1B3_RAT	Atp1b3	Sodium/potassium-transporting ATPase subunit beta-3	0	NFLKPYSVEEQK	NFLKPYSVEEQK	2	NFLKPYSVEEQK2	10337.5	10362.2	6827.27
Q63377	A0A8I6AFS5;Q63377	AT1B3_RAT	Atp1b3	Sodium/potassium-transporting ATPase subunit beta-3	0	NFLKPYSVEEQK	NFLKPYSVEEQK	3	NFLKPYSVEEQK3	28045.9	31987.4	42277.7
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	NFLLAER	NFLLAER	2	NFLLAER2	16020	20820.4	15123.3
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	NFLLLDELPER	NFLLLDELPER	2	NFLLLDELPER2	55155.4	44049.5	55557.1
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	NFLLLDELPERK	NFLLLDELPERK	2	NFLLLDELPERK2	3906.91	1671.99	6595.06
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	NFLLLDELPERK	NFLLLDELPERK	3	NFLLLDELPERK3	13020.1	14712.2	9956.11
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	NFLLSLK	NFLLSLK	2	NFLLSLK2	16440.7	18151.3	12541.9
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	NFLQGHTVNQESLVQCQGPAIIGALLR	NFLQGHTVNQESLVQC(UniMod:4)QGPAIIGALLR	4	NFLQGHTVNQESLVQC(UniMod:4)QGPAIIGALLR4	18164.4	22369.1	22385.5
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	NFLSAVK	NFLSAVK	1	NFLSAVK1	87494.4	90465.3	96774.7
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	NFLSAVK	NFLSAVK	2	NFLSAVK2	8.23456e+06	8.04255e+06	9.39349e+06
Q5RKH9	A0A8I6AKN4;Q5RKH9	Q5RKH9_RAT	Derl1	Derlin	0	NFLSTPQFLYR	NFLSTPQFLYR	2	NFLSTPQFLYR2	179554	213914	179241
Q5PPL3	Q5PPL3	NSDHL_RAT	Nsdhl	Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating	1	NFLTAAIRPHGIFGPR	NFLTAAIRPHGIFGPR	3	NFLTAAIRPHGIFGPR3	33685	36936.9	27235
Q5PPL3	Q5PPL3	NSDHL_RAT	Nsdhl	Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating	1	NFLTAAIRPHGIFGPR	NFLTAAIRPHGIFGPR	4	NFLTAAIRPHGIFGPR4	22074.6	21516.6	38428.1
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	NFLVLAAHR	NFLVLAAHR	2	NFLVLAAHR2	21987.5	18903.1	20084.3
Q63313	Q63313	LBP_RAT	Lbp	Lipopolysaccharide-binding protein	1	NFLYLGANVQYMR	NFLYLGANVQYMR	2	NFLYLGANVQYMR2	25419	12415.6	17823.4
D3ZKE1	D3ZKE1	D3ZKE1_RAT	Uvrag	UV radiation resistance associated	1	NFMEHGLMVR	NFMEHGLMVR	3	NFMEHGLMVR3	17274.1	14549.7	11973
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	NFMESVPEPR	NFMESVPEPR	2	NFMESVPEPR2	64801	61497.6	48012.8
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	NFMESVPEPRPSEWDK	NFMESVPEPRPSEWDK	3	NFMESVPEPRPSEWDK3	48783.9	43105.9	56852.9
Q3T1J9	Q3T1J9;A0A8I6AAQ1;A0A8I5ZK61	MOB1A_RAT	Mob1a	MOB kinase activator 1A	0	NFMSVAK	NFMSVAK	2	NFMSVAK2	25842.4	20297.4	12126.8
Q9R1Z0	Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	1	NFNAGGHK	NFNAGGHK	2	NFNAGGHK2			708702
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	NFNANLEGDK	NFNANLEGDK	2	NFNANLEGDK2	47525.1	39811.2	35932.8
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	NFNANLEGDKKPK	NFNANLEGDKKPK	2	NFNANLEGDKKPK2	1690.02		
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	NFNANLEGDKKPK	NFNANLEGDKKPK	3	NFNANLEGDKKPK3	60486.9	56752.9	52641
Q63615	Q63615	VP33A_RAT	Vps33a	Vacuolar protein sorting-associated protein 33A	1	NFNAVGSVLSK	NFNAVGSVLSK	2	NFNAVGSVLSK2	8463.16	11886.7	7287.88
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	NFNETFLK	NFNETFLK	2	NFNETFLK2	39611.6	40117.6	37829.6
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	NFNIAGTVVK	NFNIAGTVVK	2	NFNIAGTVVK2	330571	393459	401072
B2GV06	B2GV06	SCOT1_RAT	Oxct1	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial	1	NFNLPMCK	NFNLPMC(UniMod:4)K	2	NFNLPMC(UniMod:4)K2	220269	210699	220609
A0A0G2KAU4	A0A0G2KAU4	A0A0G2KAU4_RAT	Rasgrp3	RAS guanyl releasing protein 3	1	NFNTLMAVVGGLSHSSISR	NFNTLMAVVGGLSHSSISR	3	NFNTLMAVVGGLSHSSISR3	12790	9646.18	10733
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	NFPDLNTYFYYNSK	NFPDLNTYFYYNSK	2	NFPDLNTYFYYNSK2	1.23165e+06	803680	679747
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	NFPDLNTYFYYNSK	NFPDLNTYFYYNSK	3	NFPDLNTYFYYNSK3	62266.9	40719.9	36329.9
Q5U300	Q5U300;A0A8I5ZVX0;A0A8I6A544	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	0	NFPNAIEHTLQWAR	NFPNAIEHTLQWAR	2	NFPNAIEHTLQWAR2	39484.7	45255.9	44324.3
Q5U300	Q5U300;A0A8I5ZVX0;A0A8I6A544	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	0	NFPNAIEHTLQWAR	NFPNAIEHTLQWAR	3	NFPNAIEHTLQWAR3	136195	133003	126601
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	NFQAPTR	NFQAPTR	2	NFQAPTR2	964652	1.08554e+06	980060
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	NFQIVQLVIPQER	NFQIVQLVIPQER	2	NFQIVQLVIPQER2	36888.8	37251.7	40017.4
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	NFQIVQLVIPQER	NFQIVQLVIPQER	3	NFQIVQLVIPQER3	17524.2	22044.2	26559.1
D4A2G6	D4A2G6	D4A2G6_RAT	Thbs2	Thrombospondin 2	1	NFQMVPLDPK	NFQMVPLDPK	2	NFQMVPLDPK2	32325.6	25378.5	21102.2
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	NFQQHILNVLSK	NFQQHILNVLSK	3	NFQQHILNVLSK3	1404.46	2037.94	2302.38
E9PU10	E9PU10	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	1	NFQQLAMEFLPQYSALISK	NFQQLAMEFLPQYSALISK	3	NFQQLAMEFLPQYSALISK3	16959.2	7155.38	4816.92
D3ZP72	D3ZP72	D3ZP72_RAT	Mob3c	MOB kinase activator 3C	1	NFQQVCTK	NFQQVC(UniMod:4)TK	2	NFQQVC(UniMod:4)TK2	3221.64	2671.59	2700.1
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	NFRPDDPTRK	NFRPDDPTRK	3	NFRPDDPTRK3	42897.7	29075.7	52658.7
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	NFRPQCLVMTGSPNSR	NFRPQC(UniMod:4)LVMTGSPNSR	3	NFRPQC(UniMod:4)LVMTGSPNSR3	13740.9	12032.4	4839.2
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	NFRTENYEEQFEMFK	NFRTENYEEQFEMFK	3	NFRTENYEEQFEMFK3	11684.6	6062.72	6448.79
P08461	A0A8I6B5J2;P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	0	NFSAIINPPQACILAIGASEDK	NFSAIINPPQAC(UniMod:4)ILAIGASEDK	3	NFSAIINPPQAC(UniMod:4)ILAIGASEDK3	12763.1	16778.9	15645.8
Q5XFX0	Q5XFX0	TAGL2_RAT	Tagln2	Transgelin-2	1	NFSDNQLQEGK	NFSDNQLQEGK	2	NFSDNQLQEGK2	865834	716077	730717
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	NFSGAELEGLVR	NFSGAELEGLVR	2	NFSGAELEGLVR2	25662.2	35658.8	47238.3
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	NFSNYSSWHYR	NFSNYSSWHYR	3	NFSNYSSWHYR3	8871	9024.41	
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	NFSPYYSR	NFSPYYSR	2	NFSPYYSR2	49701	48992.5	58874.6
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	NFSQYSIDPVTR	NFSQYSIDPVTR	2	NFSQYSIDPVTR2	10040.4	11674.4	9612.02
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	NFSSISAALEDSQSALSAHVPALSSR	NFSSISAALEDSQSALSAHVPALSSR	3	NFSSISAALEDSQSALSAHVPALSSR3	7538.67	8810.1	12624.4
A0A0U1RS29	A0A0U1RS29	A0A0U1RS29_RAT	Rgl2	Ral guanine nucleotide dissociation stimulator-like 2	1	NFSSVYAVVSALQSSPIHR	NFSSVYAVVSALQSSPIHR	3	NFSSVYAVVSALQSSPIHR3	7570.24	6775.47	8453.71
A0A0G2JVT8	A0A8I6ARY9;A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	0	NFSTALVWANQAK	NFSTALVWANQAK	2	NFSTALVWANQAK2	6192.74	3963.79	
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	NFSTCLELGESLLQR	NFSTC(UniMod:4)LELGESLLQR	2	NFSTC(UniMod:4)LELGESLLQR2	14349.2	11264	4145.96
Q6AXV4	Q6AXV4	SAM50_RAT	Samm50	Sorting and assembly machinery component 50 homolog	1	NFSVNLYK	NFSVNLYK	2	NFSVNLYK2	90798.1	81259.1	115319
P04762	P04762	CATA_RAT	Cat	Catalase	1	NFTDVHPDYGAR	NFTDVHPDYGAR	3	NFTDVHPDYGAR3	13061.5	12101.2	22246.6
P18292	P18292	THRB_RAT	F2	Prothrombin	1	NFTENDLLVR	NFTENDLLVR	2	NFTENDLLVR2	1.0234e+06	1.15472e+06	1.11331e+06
Q9WVK3	Q9WVK3	PECR_RAT	Pecr	Peroxisomal trans-2-enoyl-CoA reductase	1	NFTIPDHDNWPVGAGDSSFIK	NFTIPDHDNWPVGAGDSSFIK	3	NFTIPDHDNWPVGAGDSSFIK3	11769.2	6293.16	10861.1
Q5GFD9	Q5GFD9	IMPCT_RAT	Impact	Protein IMPACT	1	NFTNSPEESAK	NFTNSPEESAK	2	NFTNSPEESAK2	21855	18678.6	19704.8
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	NFTTEQVTAMLLSK	NFTTEQVTAMLLSK	2	NFTTEQVTAMLLSK2	136143	176478	141017
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	NFTTEQVTAMLLSK	NFTTEQVTAMLLSK	3	NFTTEQVTAMLLSK3	47284.9	53163.5	39613.9
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	NFVASHIANILNSEELYVQDLK	NFVASHIANILNSEELYVQDLK	3	NFVASHIANILNSEELYVQDLK3	1.33675e+06	1.73553e+06	2.01886e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	NFVASHIANILNSEELYVQDLK	NFVASHIANILNSEELYVQDLK	4	NFVASHIANILNSEELYVQDLK4	57844.2	42853.4	47176.8
O88664	O88664;Q9JLS3	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	0	NFVDSCLQK	NFVDSC(UniMod:4)LQK	2	NFVDSC(UniMod:4)LQK2	28577.3	42292.8	23831.7
M0R3L8	M0R3L8	M0R3L8_RAT	Gba	Glucosylceramidase	1	NFVDSPIIVDIPK	NFVDSPIIVDIPK	2	NFVDSPIIVDIPK2	51992	39668	35530
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	NFVEETVYLLSR	NFVEETVYLLSR	2	NFVEETVYLLSR2	17416.8	12148	14120.3
Q496Z0	Q496Z0	ELP2_RAT	Elp2	Elongator complex protein 2	1	NFVENFSVISR	NFVENFSVISR	2	NFVENFSVISR2	10179.4	9050.79	7925.26
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	NFVESLYDTTLELSSR	NFVESLYDTTLELSSR	2	NFVESLYDTTLELSSR2	10956.5	9158.29	9723.87
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	NFVESLYDTTLELSSR	NFVESLYDTTLELSSR	3	NFVESLYDTTLELSSR3	16997.2	14912.3	13673.1
D3ZHZ3	D3ZHZ3	D3ZHZ3_RAT	Osbpl3	Oxysterol-binding protein	1	NFVFWQDVR	NFVFWQDVR	2	NFVFWQDVR2	14728.5	13197.7	13694.5
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	NFVGPPHFQVICR	NFVGPPHFQVIC(UniMod:4)R	2	NFVGPPHFQVIC(UniMod:4)R2	6105.81	7468.1	6943.2
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	NFVGPPHFQVICR	NFVGPPHFQVIC(UniMod:4)R	3	NFVGPPHFQVIC(UniMod:4)R3	187187	230822	180590
F1LNH3	F1LNH3	F1LNH3_RAT	Col6a2	Collagen type VI alpha 2 chain	1	NFVINVVNR	NFVINVVNR	2	NFVINVVNR2	11856.4	11211.6	11340.8
Q63616	Q63616	VP33B_RAT	Vps33b	Vacuolar protein sorting-associated protein 33B	1	NFVSQELK	NFVSQELK	2	NFVSQELK2	27083.2	20939.4	20361.6
Q2M2S1	Q2M2S1	Q2M2S1_RAT	Tor1b	Torsin	1	NFVSQIVAENLYPK	NFVSQIVAENLYPK	2	NFVSQIVAENLYPK2	14168.9	3883.19	5853.81
Q4KMA2	Q4KMA2;F7FJT3	RD23B_RAT	Rad23b	UV excision repair protein RAD23 homolog B	0	NFVVVMVTK	NFVVVMVTK	2	NFVVVMVTK2	74669.2	76439.8	60430.8
Q4KMA2	Q4KMA2	RD23B_RAT	Rad23b	UV excision repair protein RAD23 homolog B	1	NFVVVMVTKPK	NFVVVMVTKPK	2	NFVVVMVTKPK2	26019.9	28850.4	28189.4
Q4KMA2	Q4KMA2	RD23B_RAT	Rad23b	UV excision repair protein RAD23 homolog B	1	NFVVVMVTKPK	NFVVVMVTKPK	3	NFVVVMVTKPK3	12237.6	14129.5	12030.6
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	NFYDSDDEEKK	NFYDSDDEEKK	3	NFYDSDDEEKK3	7010.69	9479.2	7843.02
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	NFYENLIDLK	NFYENLIDLK	2	NFYENLIDLK2	8226.1	7255.25	14636.4
P14882	P14882	PCCA_RAT	Pcca	Propionyl-CoA carboxylase alpha chain, mitochondrial	1	NFYFLEMNTR	NFYFLEMNTR	2	NFYFLEMNTR2	14826.1	16984.9	15279.4
D4A5G8	D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	NFYGGNGIVGAQVPLGAGIALACK	NFYGGNGIVGAQVPLGAGIALAC(UniMod:4)K	3	NFYGGNGIVGAQVPLGAGIALAC(UniMod:4)K3	22500.1	21134.4	14474.7
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	NFYIIVPPLTLNFVEHSISCK	NFYIIVPPLTLNFVEHSISC(UniMod:4)K	3	NFYIIVPPLTLNFVEHSISC(UniMod:4)K3	15550.1	14271.3	18818
Q5M7T7	Q5M7T7	Q5M7T7_RAT	Pla2g7	Phospholipase A2 group VII	1	NFYQPDKER	NFYQPDKER	2	NFYQPDKER2	7977.68	12900.2	14960.5
Q5M7T7	Q5M7T7	Q5M7T7_RAT	Pla2g7	Phospholipase A2 group VII	1	NFYQPDKER	NFYQPDKER	3	NFYQPDKER3	94761.3	91696.9	114639
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	NGAAFFR	NGAAFFR	2	NGAAFFR2	7080.34	7276.63	7884.29
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	NGACVLNSICINTLGSYR	NGAC(UniMod:4)VLNSIC(UniMod:4)INTLGSYR	3	NGAC(UniMod:4)VLNSIC(UniMod:4)INTLGSYR3	7308.19	8606.18	11041.3
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	NGADLTLLDALGHDSSYYAR	NGADLTLLDALGHDSSYYAR	3	NGADLTLLDALGHDSSYYAR3	16122.2	18802.6	17219.5
Q9Z336	Q9Z336	DYLT1_RAT	Dynlt1	Dynein light chain Tctex-type 1	1	NGAGLHTASSCFWDSSTDGSCTVR	NGAGLHTASSC(UniMod:4)FWDSSTDGSC(UniMod:4)TVR	3	NGAGLHTASSC(UniMod:4)FWDSSTDGSC(UniMod:4)TVR3	9265.83	5206.46	6208.29
P28840	P28840	NEC1_RAT	Pcsk1	Neuroendocrine convertase 1	1	NGAGLMVNSR	NGAGLMVNSR	2	NGAGLMVNSR2	2414.4		4415.5
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	NGALVNAATVGAQETPLHLVALYSSK	NGALVNAATVGAQETPLHLVALYSSK	3	NGALVNAATVGAQETPLHLVALYSSK3	37769	47811.7	53928.9
P27615	P27615	SCRB2_RAT	Scarb2	Lysosome membrane protein 2	1	NGAPIIMSFPHFYQADEK	NGAPIIMSFPHFYQADEK	3	NGAPIIMSFPHFYQADEK3	2539.65	3112.82	4658.59
Q6AXX6	Q6AXX6	PXL2A_RAT	Prxl2a	Peroxiredoxin-like 2A	1	NGAVIMAVR	NGAVIMAVR	2	NGAVIMAVR2	44972.2	43004.2	52499.4
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	NGAWEIVHWEK	NGAWEIVHWEK	2	NGAWEIVHWEK2	8763.33	12456.5	10529.6
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	NGAWEIVHWEK	NGAWEIVHWEK	3	NGAWEIVHWEK3	32721.6	22652	22947.7
P31652	P31652	SC6A4_RAT	Slc6a4	Sodium-dependent serotonin transporter	1	NGCISIWR	NGC(UniMod:4)ISIWR	2	NGC(UniMod:4)ISIWR2	101105	111378	103775
Q99MB4	Q99MB4	ZNG1_RAT	Zng1	Zinc-regulated GTPase metalloprotein activator 1	1	NGCLCCSVK	NGC(UniMod:4)LC(UniMod:4)C(UniMod:4)SVK	2	NGC(UniMod:4)LC(UniMod:4)C(UniMod:4)SVK2	2075.07	2391.09	3830.86
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	NGCRPFCEVYVGEER	NGC(UniMod:4)RPFC(UniMod:4)EVYVGEER	3	NGC(UniMod:4)RPFC(UniMod:4)EVYVGEER3	29068.7	33846.8	28551.3
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	NGDFCIR	NGDFC(UniMod:4)IR	2	NGDFC(UniMod:4)IR2	971086	1.07199e+06	1.03041e+06
O88321	O88321	O88321_RAT	Psmd4	26S proteasome non-ATPase regulatory subunit 4	1	NGDFLPTR	NGDFLPTR	2	NGDFLPTR2	66870.7	52495.7	51874.4
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	NGDGKEDLIWEILK	NGDGKEDLIWEILK	3	NGDGKEDLIWEILK3	10022.5	5643.03	10870.3
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	NGDGVVDIGELQQGLQSLGIPLGQAAEEK	NGDGVVDIGELQQGLQSLGIPLGQAAEEK	3	NGDGVVDIGELQQGLQSLGIPLGQAAEEK3	30491.9	40077.3	44671.3
M0RAK0	M0RAK0	M0RAK0_RAT	Proser2	Proline and serine rich 2	1	NGDHVGMWHR	NGDHVGMWHR	3	NGDHVGMWHR3			4541.27
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	NGDIIYTYK	NGDIIYTYK	2	NGDIIYTYK2	11369	9279.5	11995.3
P62775	P62775	MTPN_RAT	Mtpn	Myotrophin	1	NGDLDEVK	NGDLDEVK	2	NGDLDEVK2	25408.7	26025	27693.7
Q920D2	Q920D2	DYR_RAT	Dhfr	Dihydrofolate reductase	1	NGDLPWPLLR	NGDLPWPLLR	2	NGDLPWPLLR2	3723.82	2658.33	2806.1
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	NGDPYVATSIVEAIATVDR	NGDPYVATSIVEAIATVDR	3	NGDPYVATSIVEAIATVDR3		1581.63	
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	NGDTASPK	NGDTASPK	1	NGDTASPK1	1600.24		
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	NGDTASPK	NGDTASPK	2	NGDTASPK2	2205.93	4313.47	3517.42
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	NGDTCVTLLDLELYNPK	NGDTC(UniMod:4)VTLLDLELYNPK	3	NGDTC(UniMod:4)VTLLDLELYNPK3	4572.45	4587.25	5691.84
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	NGDTMEYR	NGDTMEYR	2	NGDTMEYR2	202489	177345	172396
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	NGDTMEYRK	NGDTMEYRK	2	NGDTMEYRK2	1313.78		2625.05
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	NGDVHYYLK	NGDVHYYLK	2	NGDVHYYLK2	4825.14	5071.17	
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	NGDVIELK	NGDVIELK	1	NGDVIELK1	1804.38		2866.44
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	NGDVIELK	NGDVIELK	2	NGDVIELK2	47721.9	45495.8	53273.1
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	NGDVVIPSDYFK	NGDVVIPSDYFK	2	NGDVVIPSDYFK2	81853.5	72770.6	43452.5
A0A8I5Y6A1	A0A8I5Y6A1	A0A8I5Y6A1_RAT	Ablim1	Actin-binding LIM protein 1	1	NGDYLCTLDYQR	NGDYLC(UniMod:4)TLDYQR	2	NGDYLC(UniMod:4)TLDYQR2	1598.96	2852.42	3317.64
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	NGDYLCVK	NGDYLC(UniMod:4)VK	2	NGDYLC(UniMod:4)VK2	47819.1	48032.1	47225.1
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	NGEFFMSPHDFVTR	NGEFFMSPHDFVTR	2	NGEFFMSPHDFVTR2	4972.8	7058.9	12828.4
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	NGEFFMSPHDFVTR	NGEFFMSPHDFVTR	3	NGEFFMSPHDFVTR3	41875.7	49792.7	54956.4
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	NGEIDSDTVK	NGEIDSDTVK	2	NGEIDSDTVK2	46727.3	28577.1	54027.6
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	NGEIDSDTVKK	NGEIDSDTVKK	2	NGEIDSDTVKK2	41339.7	37332.3	28872
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	NGEIDSDTVKK	NGEIDSDTVKK	3	NGEIDSDTVKK3	73033.8	68981	
O35264	O35264	PA1B2_RAT	Pafah1b2	Platelet-activating factor acetylhydrolase IB subunit alpha2	1	NGELENIKPK	NGELENIKPK	2	NGELENIKPK2	1956.26		1367.58
O35264	O35264	PA1B2_RAT	Pafah1b2	Platelet-activating factor acetylhydrolase IB subunit alpha2	1	NGELENIKPK	NGELENIKPK	3	NGELENIKPK3	8885.15	9812.94	10072.3
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	NGELEQDYK	NGELEQDYK	2	NGELEQDYK2	13969.8	4.06889e+06	4.27084e+06
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	NGEMVYIIGHVPPGFFEK	NGEMVYIIGHVPPGFFEK	3	NGEMVYIIGHVPPGFFEK3	135045	139295	169458
Q5I0H9	Q5I0H9	PDIA5_RAT	Pdia5	Protein disulfide-isomerase A5	1	NGEQQAVPALR	NGEQQAVPALR	2	NGEQQAVPALR2	9539.74	11671	13962.9
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	NGESQPLVQTAVTNIDRPK	NGESQPLVQTAVTNIDRPK	3	NGESQPLVQTAVTNIDRPK3	632589	828025	760493
B0BN63	B0BN63	B0BN63_RAT	Ahsa1	Activator of Hsp90 ATPase activity 1	1	NGETELCMEGR	NGETELC(UniMod:4)MEGR	2	NGETELC(UniMod:4)MEGR2	4128.71		3582.48
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	NGETINTR	NGETINTR	2	NGETINTR2	49116.2	44303.1	43843.2
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	NGETVPIDEQFDKEK	NGETVPIDEQFDKEK	2	NGETVPIDEQFDKEK2	5970.66	5533.13	
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	NGETVPIDEQFDKEK	NGETVPIDEQFDKEK	3	NGETVPIDEQFDKEK3	36659.6	43506.1	33820.3
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	NGEVQNLAVK	NGEVQNLAVK	2	NGEVQNLAVK2	145901	179915	138037
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	NGEVWTFGVNNK	NGEVWTFGVNNK	2	NGEVWTFGVNNK2	14114.5	12867.1	14034.2
A0A0G2K975	A0A0G2K975	A0A0G2K975_RAT	Cfhr4	Similar to complement factor H-related protein	1	NGEWEEPPK	NGEWEEPPK	2	NGEWEEPPK2	5160.67	3055.09	4599.68
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	NGEWVPSNPSR	NGEWVPSNPSR	2	NGEWVPSNPSR2	104348	82162.8	72246
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	NGFEPASLK	NGFEPASLK	1	NGFEPASLK1	30752.7	41786.2	27531.3
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	NGFEPASLK	NGFEPASLK	2	NGFEPASLK2	3.66776e+06	4.33379e+06	4.22543e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	NGFEPASLKEEVGEEAIVELVENGK	NGFEPASLKEEVGEEAIVELVENGK	3	NGFEPASLKEEVGEEAIVELVENGK3	37732.1	27865	33792.5
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	NGFEPASLKEEVGEEAIVELVENGKK	NGFEPASLKEEVGEEAIVELVENGKK	3	NGFEPASLKEEVGEEAIVELVENGKK3	16028.2	19432	22184.6
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	NGFEPASLKEEVGEEAIVELVENGKK	NGFEPASLKEEVGEEAIVELVENGKK	4	NGFEPASLKEEVGEEAIVELVENGKK4	63074.9	64917.7	68297.5
Q63356	D4A7X9;Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	0	NGFEQFCINFVNEK	NGFEQFC(UniMod:4)INFVNEK	2	NGFEQFC(UniMod:4)INFVNEK2	4324.28	7430.89	7009.74
P29410	A0A8I5ZQQ9;P29410	KAD2_RAT	Ak2	Adenylate kinase 2, mitochondrial	0	NGFLLDGFPR	NGFLLDGFPR	2	NGFLLDGFPR2	90976.8	91666.1	115044
Q66HC1	Q66HC1	TDRD3_RAT	Tdrd3	Tudor domain-containing protein 3	1	NGFLLLSDSNTTVLGGEVEHLIDK	NGFLLLSDSNTTVLGGEVEHLIDK	3	NGFLLLSDSNTTVLGGEVEHLIDK3	2285.03	2353.7	
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	NGFLTISHGTANRPPAK	NGFLTISHGTANRPPAK	3	NGFLTISHGTANRPPAK3	8341.9	5551.17	14873.8
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	NGFLTISHGTANRPPAK	NGFLTISHGTANRPPAK	4	NGFLTISHGTANRPPAK4	6790.93	13845.9	16792.7
Q6IN36	Q6IN36	WIPF1_RAT	Wipf1	WAS/WASL-interacting protein family member 1	1	NGFQDSSCEDEWESR	NGFQDSSC(UniMod:4)EDEWESR	2	NGFQDSSC(UniMod:4)EDEWESR2	7083.28	5692.97	2566.91
Q3T1J1	A0A8I5ZPE3;Q3T1J1;G3V7J7	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	0	NGFVVLK	NGFVVLK	1	NGFVVLK1	20816.8	18676.5	18471
Q3T1J1	A0A8I5ZPE3;Q3T1J1;G3V7J7	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	0	NGFVVLK	NGFVVLK	2	NGFVVLK2	1.28662e+06	1.27544e+06	1.2926e+06
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	NGFYPATR	NGFYPATR	2	NGFYPATR2	242202	214876	193562
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	NGGACVDGVNTYNCR	NGGAC(UniMod:4)VDGVNTYNC(UniMod:4)R	2	NGGAC(UniMod:4)VDGVNTYNC(UniMod:4)R2	10861.1	7128.65	6808.75
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	NGGCYHYCLEETR	NGGC(UniMod:4)YHYC(UniMod:4)LEETR	2	NGGC(UniMod:4)YHYC(UniMod:4)LEETR2	126320	164051	179195
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	NGGCYHYCLEETR	NGGC(UniMod:4)YHYC(UniMod:4)LEETR	3	NGGC(UniMod:4)YHYC(UniMod:4)LEETR3	1.34976e+06	1.26771e+06	1.24022e+06
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	NGGFCEVCK	NGGFC(UniMod:4)EVC(UniMod:4)K	2	NGGFC(UniMod:4)EVC(UniMod:4)K2	8393.09	4035.91	5787.27
A0A8I6A371	A0A8I6A371	A0A8I6A371_RAT	Nmi	N-myc (and STAT) interactor	1	NGGGEVESVDYDRK	NGGGEVESVDYDRK	3	NGGGEVESVDYDRK3	13670	7484.32	6939.43
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	NGGGVGDVLR	NGGGVGDVLR	2	NGGGVGDVLR2	6382	8380.23	5867.18
Q9Z0V6	Q9Z0V6	PRDX3_RAT	Prdx3	Thioredoxin-dependent peroxide reductase, mitochondrial	1	NGGLGHMNITLLSDLTK	NGGLGHMNITLLSDLTK	2	NGGLGHMNITLLSDLTK2	3987.68	4752.29	3732.08
Q9Z0V6	Q9Z0V6	PRDX3_RAT	Prdx3	Thioredoxin-dependent peroxide reductase, mitochondrial	1	NGGLGHMNITLLSDLTK	NGGLGHMNITLLSDLTK	3	NGGLGHMNITLLSDLTK3	148603	117417	172373
Q5RK19	Q5RK19	SNF8_RAT	Snf8	Vacuolar-sorting protein SNF8	1	NGGLITLEELHQQVLK	NGGLITLEELHQQVLK	3	NGGLITLEELHQQVLK3		3546.6	3846.25
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	NGGLYFPK	NGGLYFPK	1	NGGLYFPK1	2027.23	1166	1585.54
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	NGGLYFPK	NGGLYFPK	2	NGGLYFPK2	52161.1	58624.1	45364.5
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	NGGLYHER	NGGLYHER	2	NGGLYHER2	145290	43994.9	38346.4
Q5XFW8	Q5XFW8	SEC13_RAT	Sec13	Protein SEC13 homolog	1	NGGQILIADLR	NGGQILIADLR	2	NGGQILIADLR2	24064.3	26693.1	30534
P97544	P97544	PLPP3_RAT	Plpp3	Phospholipid phosphatase 3	1	NGGSPALNNNPR	NGGSPALNNNPR	2	NGGSPALNNNPR2	2576.08	923.147	5231.47
A0JN30	A0JN30	A0JN30_RAT	Cnpy2	Canopy FGF signaling regulator 2	1	NGGSSELDLQGIR	NGGSSELDLQGIR	2	NGGSSELDLQGIR2	25770	14263.8	18176.2
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	NGGTCDLLTLTEYK	NGGTC(UniMod:4)DLLTLTEYK	2	NGGTC(UniMod:4)DLLTLTEYK2	5834.82	4864.16	7398.73
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	NGGVCAVASNTAR	NGGVC(UniMod:4)AVASNTAR	2	NGGVC(UniMod:4)AVASNTAR2	23099.8	21850.2	17868
Q09326	Q09326	MGAT2_RAT	Mgat2	Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	1	NGGWGDIRDHELCK	NGGWGDIRDHELC(UniMod:4)K	3	NGGWGDIRDHELC(UniMod:4)K3		4444.53	4842.74
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	NGHFFPEQVLNK	NGHFFPEQVLNK	3	NGHFFPEQVLNK3	2793.25	5286.22	3698.95
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	NGHHLATTQPLITICINGHLNYPVCTK	NGHHLATTQPLITIC(UniMod:4)INGHLNYPVC(UniMod:4)TK	4	NGHHLATTQPLITIC(UniMod:4)INGHLNYPVC(UniMod:4)TK4	17354.9	9629.32	9470.33
A0A8I5XWT0	A0A8I5XWT0	A0A8I5XWT0_RAT	Cd55	CD55 molecule (Cromer blood group)	1	NGHINIPTDILFGSEIIFSCDK	NGHINIPTDILFGSEIIFSC(UniMod:4)DK	3	NGHINIPTDILFGSEIIFSC(UniMod:4)DK3	44392.3	64351.8	60345
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	NGHLAVVAPR	NGHLAVVAPR	2	NGHLAVVAPR2	13859.1	16130.4	18488.6
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	NGHNEMDEPMFTQPLMYK	NGHNEMDEPMFTQPLMYK	3	NGHNEMDEPMFTQPLMYK3	24218.3	19995.6	22537.4
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	NGHVGISFVPK	NGHVGISFVPK	2	NGHVGISFVPK2	54616.5	42843.4	71348.2
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	NGHVGISFVPK	NGHVGISFVPK	3	NGHVGISFVPK3	425325	434324	372796
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	NGIDIYSLTVDSR	NGIDIYSLTVDSR	2	NGIDIYSLTVDSR2	601836	572204	650694
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	NGIDIYSLTVDSR	NGIDIYSLTVDSR	3	NGIDIYSLTVDSR3	3253.35	3612.32	10557.3
A1L108	A1L108	ARP5L_RAT	Arpc5l	Actin-related protein 2/3 complex subunit 5-like protein	1	NGIDLLMK	NGIDLLMK	2	NGIDLLMK2	15401.5	11225.7	7561.8
G3V7P2	G3V7P2	G3V7P2_RAT	Fgl2	Fibrinogen-like 2	1	NGIFWGTWPGVSQAHPGGYK	NGIFWGTWPGVSQAHPGGYK	3	NGIFWGTWPGVSQAHPGGYK3	1.02867e+06	1.14829e+06	1.16229e+06
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	NGIGNLLMYVK	NGIGNLLMYVK	2	NGIGNLLMYVK2	19090.1	12173.3	20486.8
D3ZWS6	D3ZWS6	D3ZWS6_RAT	Naa30	N(alpha)-acetyltransferase 30, NatC catalytic subunit	1	NGIGTNLVK	NGIGTNLVK	2	NGIGTNLVK2	7127.24		6177.05
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	NGILTISHATSNR	NGILTISHATSNR	2	NGILTISHATSNR2	2820.4	4493.55	
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	NGILTISHATSNR	NGILTISHATSNR	3	NGILTISHATSNR3	36174.6	40021.7	40550.8
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	NGIQEFPENIK	NGIQEFPENIK	2	NGIQEFPENIK2	219394	203102	218438
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	NGISFTIWDR	NGISFTIWDR	2	NGISFTIWDR2	20823.5	10730.9	19567.6
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	NGIVNENIIPEGYDFVFRPISANAK	NGIVNENIIPEGYDFVFRPISANAK	3	NGIVNENIIPEGYDFVFRPISANAK3	32314.5	18461.6	9870.34
A0A8I6GAD6	A0A8I6GAD6	A0A8I6GAD6_RAT	Nrbp1	Nuclear receptor binding protein 1	1	NGIYPLTAFGLPR	NGIYPLTAFGLPR	2	NGIYPLTAFGLPR2	21874.8	19347.7	16509.2
Q99ME0	Q99ME0	Q99ME0_RAT	Ppbp	Pro-platelet basic protein	1	NGKEVCLDPTAPMIK	NGKEVC(UniMod:4)LDPTAPMIK	2	NGKEVC(UniMod:4)LDPTAPMIK2	2377.28	3932.76	2114.12
Q99ME0	Q99ME0	Q99ME0_RAT	Ppbp	Pro-platelet basic protein	1	NGKEVCLDPTAPMIK	NGKEVC(UniMod:4)LDPTAPMIK	3	NGKEVC(UniMod:4)LDPTAPMIK3	5018.27	16068	19580.6
D3ZLA3	D3ZLA3	D3ZLA3_RAT	Cpne3	Copine 3	1	NGKPAGQGSITILAEEIKDNR	NGKPAGQGSITILAEEIKDNR	4	NGKPAGQGSITILAEEIKDNR4	15722.4	8328.66	13173.1
P47858	P47858	PFKAM_RAT	Pfkm	ATP-dependent 6-phosphofructokinase, muscle type	1	NGKPITSEDIK	NGKPITSEDIK	3	NGKPITSEDIK3	53297.3	53344.1	41343.5
P15429	P15429	ENOB_RAT	Eno3	Beta-enolase	1	NGKYDLDFKSPDDPAR	NGKYDLDFKSPDDPAR	3	NGKYDLDFKSPDDPAR3			9725.81
Q99P55	Q99P55	SGPP1_RAT	Sgpp1	Sphingosine-1-phosphate phosphatase 1	1	NGLAAEPGPTGPR	NGLAAEPGPTGPR	2	NGLAAEPGPTGPR2	4794.66	5551.32	
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	NGLAFCAILHR	NGLAFC(UniMod:4)AILHR	2	NGLAFC(UniMod:4)AILHR2	4985.88	8800.81	7755.38
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	NGLAFCAILHR	NGLAFC(UniMod:4)AILHR	3	NGLAFC(UniMod:4)AILHR3	40746.8	38273.3	24767.4
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	NGLCVNSR	NGLC(UniMod:4)VNSR	2	NGLC(UniMod:4)VNSR2	18694.7	30246.7	21610.5
P97700	P97700	M2OM_RAT	Slc25a11	Mitochondrial 2-oxoglutarate/malate carrier protein	1	NGLDVLLK	NGLDVLLK	2	NGLDVLLK2	26360	24187.8	24269
F7FMS0	F7FMS0	F7FMS0_RAT	Mst1	Macrophage stimulating 1	1	NGLEENFCR	NGLEENFC(UniMod:4)R	2	NGLEENFC(UniMod:4)R2	2649.41	13721.4	
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	NGLELWTPVR	NGLELWTPVR	2	NGLELWTPVR2	5.40047e+06	6.15222e+06	5.24816e+06
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	NGLELWTPVR	NGLELWTPVR	3	NGLELWTPVR3	8676.25	14346.4	11426.2
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	NGLELWTPVRK	NGLELWTPVRK	2	NGLELWTPVRK2	1.07358e+06	1.29974e+06	1.18984e+06
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	NGLELWTPVRK	NGLELWTPVRK	3	NGLELWTPVRK3	3.45549e+06	4.29463e+06	4.46522e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	NGLGPTK	NGLGPTK	1	NGLGPTK1		708774	
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	NGLLHGYFTLPFLK	NGLLHGYFTLPFLK	3	NGLLHGYFTLPFLK3	4150.3		1482.11
Q9JI92	Q9JI92	SDCB1_RAT	Sdcbp	Syntenin-1	1	NGLLTDHHICEINGQNVIGLK	NGLLTDHHIC(UniMod:4)EINGQNVIGLK	3	NGLLTDHHIC(UniMod:4)EINGQNVIGLK3	12554	9664.69	4900.11
Q9JI92	Q9JI92	SDCB1_RAT	Sdcbp	Syntenin-1	1	NGLLTDHHICEINGQNVIGLK	NGLLTDHHIC(UniMod:4)EINGQNVIGLK	4	NGLLTDHHIC(UniMod:4)EINGQNVIGLK4	50855.3	40306.2	54186.6
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	NGLPEHTDPEDNEIVCFLK	NGLPEHTDPEDNEIVC(UniMod:4)FLK	3	NGLPEHTDPEDNEIVC(UniMod:4)FLK3	2462.49		1775.53
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	NGLPVDIAK	NGLPVDIAK	2	NGLPVDIAK2	45537.5	34592.3	37418.4
B2GV06	B2GV06	SCOT1_RAT	Oxct1	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial	1	NGLTLIELWEGLTVDDIRK	NGLTLIELWEGLTVDDIRK	3	NGLTLIELWEGLTVDDIRK3	7846.2		
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	NGLTMVVQELLGK	NGLTMVVQELLGK	2	NGLTMVVQELLGK2	12622.6		
Q6AYA5	Q6AYA5	T106B_RAT	Tmem106b	Transmembrane protein 106B	1	NGLVSSEVR	NGLVSSEVR	2	NGLVSSEVR2	10362.4	13100.4	5898.66
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	NGLWGHALLLASK	NGLWGHALLLASK	3	NGLWGHALLLASK3	4373.09		3387.13
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	NGLYPAYTGLPGSR	NGLYPAYTGLPGSR	2	NGLYPAYTGLPGSR2	12475.4	12389.8	
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	NGMAVIRPPGHHAQR	NGMAVIRPPGHHAQR	3	NGMAVIRPPGHHAQR3	4569.44	4660.02	2016.09
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	NGMAVIRPPGHHAQR	NGMAVIRPPGHHAQR	4	NGMAVIRPPGHHAQR4	6997.38	9545.74	6184.47
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	NGMLLTGGGK	NGMLLTGGGK	2	NGMLLTGGGK2	11140.1	17515	17100
F7F1X7	F7F1X7	F7F1X7_RAT	Pmm2	Phosphomannomutase	1	NGMLNVSPIGR	NGMLNVSPIGR	2	NGMLNVSPIGR2	8317.13	10362.9	10446.4
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	NGMMHGDK	NGMMHGDK	1	NGMMHGDK1			4903.64
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	NGMMHGDK	NGMMHGDK	2	NGMMHGDK2			7069.66
A0A8I5ZY29	A0A8I5ZY29	A0A8I5ZY29_RAT	Usp14	Ubiquitin carboxyl-terminal hydrolase	1	NGMTVLMMGSADALPEEPSAK	NGMTVLMMGSADALPEEPSAK	3	NGMTVLMMGSADALPEEPSAK3	1637.9	5498.03	7859.16
Q5XIN4	Q5XIN4	Q5XIN4_RAT	Mtmr9	Myotubularin related protein 9	1	NGMVIMR	NGMVIMR	2	NGMVIMR2	17040.6	28893.4	14600.5
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	NGNLGLSGMAIADITLLSGFQALR	NGNLGLSGMAIADITLLSGFQALR	3	NGNLGLSGMAIADITLLSGFQALR3	497947	220645	262616
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	NGNLGLSGMAIADITLLSGFQALR	NGNLGLSGMAIADITLLSGFQALR	4	NGNLGLSGMAIADITLLSGFQALR4	6317.2	17350	27175.5
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	NGNLPEFGDAIATASK	NGNLPEFGDAIATASK	2	NGNLPEFGDAIATASK2	2.58155e+06	2.41802e+06	2.51851e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	NGNLPEFGDAIATASK	NGNLPEFGDAIATASK	3	NGNLPEFGDAIATASK3	54754	64977.7	66051.2
O55004	O55004	RNAS4_RAT	Rnase4	Ribonuclease 4	1	NGNMNCHEGIVR	NGNMNC(UniMod:4)HEGIVR	3	NGNMNC(UniMod:4)HEGIVR3	2147.38	5548.45	
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	NGNMSGISDQR	NGNMSGISDQR	2	NGNMSGISDQR2	5.88541e+06	5.10916e+06	4.5943e+06
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	NGNMSGISDQR	NGNMSGISDQR	3	NGNMSGISDQR3	5095.02	7737.92	
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	NGNPNGEGLPHWPK	NGNPNGEGLPHWPK	2	NGNPNGEGLPHWPK2	2093.77	2134.45	1592.9
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	NGNPNGEGLPHWPK	NGNPNGEGLPHWPK	3	NGNPNGEGLPHWPK3	28547.2	26594.1	25401.9
A0A1B0GWT7	A0A1B0GWT7;A0A8I6ADH7	A0A1B0GWT7_RAT	Lamtor2	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2	0	NGNQAFNEDSLK	NGNQAFNEDSLK	2	NGNQAFNEDSLK2	14142.7	16077.5	9110.64
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	NGNVANYVETEQLIHVHNHTLSFIQTR	NGNVANYVETEQLIHVHNHTLSFIQTR	4	NGNVANYVETEQLIHVHNHTLSFIQTR4	2995.09	6484.94	2208.96
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	NGPALQEAYVR	NGPALQEAYVR	2	NGPALQEAYVR2	398040	403265	442888
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	NGPDTERLPTSHTCFNVLLLPEYSSK	NGPDTERLPTSHTC(UniMod:4)FNVLLLPEYSSK	4	NGPDTERLPTSHTC(UniMod:4)FNVLLLPEYSSK4		2936.89	3047.03
B5DFN2	D3ZWL6;B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	0	NGPFKPNYYR	NGPFKPNYYR	3	NGPFKPNYYR3	88326.8	104290	90845.2
Q4V8F3	Q4V8F3	RHBL4_RAT	Rhbdd1	Rhomboid-related protein 4	1	NGPIPYGFR	NGPIPYGFR	2	NGPIPYGFR2	10549.3	12979.1	
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	NGPLNESQEEEEDSEQGSNLNR	NGPLNESQEEEEDSEQGSNLNR	3	NGPLNESQEEEEDSEQGSNLNR3	6867.39	9066.98	7555.89
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	NGPLPIPSEGSGFTK	NGPLPIPSEGSGFTK	2	NGPLPIPSEGSGFTK2	11638.5	14639.8	13579.2
P97578	P97578	FEZ2_RAT	Fez2	Fasciculation and elongation protein zeta-2	1	NGPPSVEDLQILTK	NGPPSVEDLQILTK	2	NGPPSVEDLQILTK2	28373.1	25539.1	23013.5
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	NGPSFQTTFEK	NGPSFQTTFEK	2	NGPSFQTTFEK2	13948.1	4806.25	19101.9
G3V7L4	G3V7L4	G3V7L4_RAT	Cdh16	Cadherin 16	1	NGPYSFALGPNPTVQR	NGPYSFALGPNPTVQR	2	NGPYSFALGPNPTVQR2	37989.3	22795.6	31895.9
G3V7L4	G3V7L4	G3V7L4_RAT	Cdh16	Cadherin 16	1	NGPYSFALGPNPTVQR	NGPYSFALGPNPTVQR	3	NGPYSFALGPNPTVQR3	9352.4	17097.4	5296.93
P98166	P98166	VLDLR_RAT	Vldlr	Very low-density lipoprotein receptor	1	NGQCVPNR	NGQC(UniMod:4)VPNR	2	NGQC(UniMod:4)VPNR2			19192.2
Q62636	Q62636;P62836	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	0	NGQGFALVYSITAQSTFNDLQDLR	NGQGFALVYSITAQSTFNDLQDLR	3	NGQGFALVYSITAQSTFNDLQDLR3	58397.3	66149	65772.2
Q62636	Q62636;P62836	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	0	NGQGFALVYSITAQSTFNDLQDLREQILR	NGQGFALVYSITAQSTFNDLQDLREQILR	4	NGQGFALVYSITAQSTFNDLQDLREQILR4		6183.73	6101.21
P61227	P61227;A0A0G2JTW1;D3ZK56	RAP2B_RAT	Rap2b	Ras-related protein Rap-2b	0	NGQGFILVYSLVNQQSFQDIKPMR	NGQGFILVYSLVNQQSFQDIKPMR	3	NGQGFILVYSLVNQQSFQDIKPMR3	47608.4	49865.8	73447.1
P61227	P61227;A0A0G2JTW1;D3ZK56	RAP2B_RAT	Rap2b	Ras-related protein Rap-2b	0	NGQGFILVYSLVNQQSFQDIKPMR	NGQGFILVYSLVNQQSFQDIKPMR	4	NGQGFILVYSLVNQQSFQDIKPMR4	12778	3281.62	16420
P04166	P04166	CYB5B_RAT	Cyb5b	Cytochrome b5 type B	1	NGQGSDPAVTYYR	NGQGSDPAVTYYR	2	NGQGSDPAVTYYR2	16003.7	12915.8	16134.4
Q66H91	Q66H91	GIT2_RAT	Git2	ARF GTPase-activating protein GIT2	1	NGQHFIIPQMADSSLDLSELAK	NGQHFIIPQMADSSLDLSELAK	3	NGQHFIIPQMADSSLDLSELAK3		15911.8	16073.9
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	NGQHVASSPIPVVISQSEIGDASR	NGQHVASSPIPVVISQSEIGDASR	3	NGQHVASSPIPVVISQSEIGDASR3	285890	238946	241829
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	NGQSEVSLK	NGQSEVSLK	2	NGQSEVSLK2	2542.34	2419.97	
P35815	P35815	PPM1B_RAT	Ppm1b	Protein phosphatase 1B	1	NGQVCFSTQDHKPCNPMEK	NGQVC(UniMod:4)FSTQDHKPC(UniMod:4)NPMEK	3	NGQVC(UniMod:4)FSTQDHKPC(UniMod:4)NPMEK3	5809.22	2590.6	7188.06
P35815	P35815	PPM1B_RAT	Ppm1b	Protein phosphatase 1B	1	NGQVCFSTQDHKPCNPMEK	NGQVC(UniMod:4)FSTQDHKPC(UniMod:4)NPMEK	4	NGQVC(UniMod:4)FSTQDHKPC(UniMod:4)NPMEK4	5553.18	13852.6	11386.9
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	NGQVELHEFLQLMSAVHTGR	NGQVELHEFLQLMSAVHTGR	4	NGQVELHEFLQLMSAVHTGR4	41343.5	28342.1	46339
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	NGQVTCFVEACQPAACPQPVK	NGQVTC(UniMod:4)FVEAC(UniMod:4)QPAAC(UniMod:4)PQPVK	3	NGQVTC(UniMod:4)FVEAC(UniMod:4)QPAAC(UniMod:4)PQPVK3	11782.4	7154.37	3854.84
A0A096MJF9	A0A096MJF9	A0A096MJF9_RAT	Tmem132e	Transmembrane protein 132E	1	NGQWHVTSELLTGAK	NGQWHVTSELLTGAK	3	NGQWHVTSELLTGAK3			3444.43
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	NGQWTLIGR	NGQWTLIGR	2	NGQWTLIGR2	43954.4	31712.2	43268.8
Q3KRD5	Q3KRD5	TOM34_RAT	Tomm34	Mitochondrial import receptor subunit TOM34	1	NGQYGEASALYER	NGQYGEASALYER	2	NGQYGEASALYER2	1335.85	1054.85	2134.61
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	NGREDFYR	NGREDFYR	2	NGREDFYR2	10042.8	15625.8	10368
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	NGRVEIIANDQGNR	NGRVEIIANDQGNR	3	NGRVEIIANDQGNR3	28484.8	36032.3	32423.9
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	NGSEADIDESLYSR	NGSEADIDESLYSR	2	NGSEADIDESLYSR2	4236.85	712.793	10670.1
P35000	P35000	VIPR2_RAT	Vipr2	Vasoactive intestinal polypeptide receptor 2	1	NGSESALQIHR	NGSESALQIHR	3	NGSESALQIHR3	3394.97	3350.21	
Q62598	Q62598	DSPP_RAT	Dspp	Dentin sialophosphoprotein	1	NGSESIAVGGK	NGSESIAVGGK	2	NGSESIAVGGK2	42549.1	12173.1	17402.3
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	NGSETQLNK	NGSETQLNK	2	NGSETQLNK2			2149.87
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	NGSGEVYQGPAK	NGSGEVYQGPAK	2	NGSGEVYQGPAK2	44689.9	33577.7	38544.9
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	NGSLFAFR	NGSLFAFR	2	NGSLFAFR2	108625	118818	127390
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	NGSLICTASK	NGSLIC(UniMod:4)TASK	2	NGSLIC(UniMod:4)TASK2	188025	204435	217096
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	NGSLLDCPPPEDPAIAQLLK	NGSLLDC(UniMod:4)PPPEDPAIAQLLK	3	NGSLLDC(UniMod:4)PPPEDPAIAQLLK3	2386.16	4280.78	9850.07
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	NGSPPQSAGASVR	NGSPPQSAGASVR	2	NGSPPQSAGASVR2	6040.65	34215.8	27835.1
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	NGSVVAMTGDGVNDAVALK	NGSVVAMTGDGVNDAVALK	2	NGSVVAMTGDGVNDAVALK2	21681	23525.7	19581.2
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	NGSVVAMTGDGVNDAVALK	NGSVVAMTGDGVNDAVALK	3	NGSVVAMTGDGVNDAVALK3	1586.8		
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	NGSYCVLQMDQSYKPDENEVR	NGSYC(UniMod:4)VLQMDQSYKPDENEVR	3	NGSYC(UniMod:4)VLQMDQSYKPDENEVR3	7863.27	6114.3	9635.83
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	NGTDPDFK	NGTDPDFK	1	NGTDPDFK1	4009.66	3068.41	2834.17
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	NGTDPDFK	NGTDPDFK	2	NGTDPDFK2	54007.9	61804.2	70431.3
P55213	P55213	CASP3_RAT	Casp3	Caspase-3	1	NGTDVDAANLR	NGTDVDAANLR	2	NGTDVDAANLR2	78569.4	55981.9	40542.3
Q5PPL3	Q5PPL3	NSDHL_RAT	Nsdhl	Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating	1	NGTEDLPYAMKPIDYYTETK	NGTEDLPYAMKPIDYYTETK	3	NGTEDLPYAMKPIDYYTETK3	131319	148640	110021
P18298	P18298;A0A8I6G8F2	METK2_RAT	Mat2a	S-adenosylmethionine synthase isoform type-2	0	NGTLPWLRPDSK	NGTLPWLRPDSK	3	NGTLPWLRPDSK3	5315.61	15532	12479.6
Q6AYD4	Q6AYD4	ESAM_RAT	Esam	Endothelial cell-selective adhesion molecule	1	NGTLSSVTSAR	NGTLSSVTSAR	2	NGTLSSVTSAR2	36119.2	27714.4	32578.4
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	NGTLYGQGVYFAK	NGTLYGQGVYFAK	2	NGTLYGQGVYFAK2	3472.35	3487.2	5302.97
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	NGTSIIQGALTQLIQLYHR	NGTSIIQGALTQLIQLYHR	3	NGTSIIQGALTQLIQLYHR3	1946	1222.9	4018.39
P13838	P13838	LEUK_RAT	Spn	Leukosialin (Fragment)	1	NGTVDAWAGPAR	NGTVDAWAGPAR	2	NGTVDAWAGPAR2	15523.1	10920.5	7376.25
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	NGVAPGAQILSIK	NGVAPGAQILSIK	2	NGVAPGAQILSIK2	30895.9	31048.8	30202
P18445	D3ZF07;P18445	RL27A_RAT	Rpl27a	Large ribosomal subunit protein uL15	0	NGVAPIIDVVR	NGVAPIIDVVR	2	NGVAPIIDVVR2	17709.4	19693	19716.9
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	NGVAYLYGIISWGDGCGR	NGVAYLYGIISWGDGC(UniMod:4)GR	2	NGVAYLYGIISWGDGC(UniMod:4)GR2	16214.3	14706.2	15697.2
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	NGVAYLYGIISWGDGCGR	NGVAYLYGIISWGDGC(UniMod:4)GR	3	NGVAYLYGIISWGDGC(UniMod:4)GR3	14336.4	14854.1	10529.5
M0RCI5	M0RCI5	M0RCI5_RAT	Pla2g12b	Phospholipase A2, group XIIB	1	NGVCQYR	NGVC(UniMod:4)QYR	2	NGVC(UniMod:4)QYR2	4357.88	5893.99	8379.15
P14630	P14630	APOM_RAT	Apom	Apolipoprotein M	1	NGVCVPR	NGVC(UniMod:4)VPR	2	NGVC(UniMod:4)VPR2	5.62102e+06	5.48348e+06	5.81121e+06
P14630	P14630	APOM_RAT	Apom	Apolipoprotein M	1	NGVCVPRK	NGVC(UniMod:4)VPRK	2	NGVC(UniMod:4)VPRK2		4035.6	
Q4KLF8	Q4KLF8	ARPC5_RAT	Arpc5	Actin-related protein 2/3 complex subunit 5	1	NGVDLLMK	NGVDLLMK	1	NGVDLLMK1	5705.31	3203.69	933.542
Q4KLF8	Q4KLF8	ARPC5_RAT	Arpc5	Actin-related protein 2/3 complex subunit 5	1	NGVDLLMK	NGVDLLMK	2	NGVDLLMK2	236407	181346	235596
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	NGVDPELLVYTVTLINK	NGVDPELLVYTVTLINK	2	NGVDPELLVYTVTLINK2		1089.04	4647.98
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	NGVDPELLVYTVTLINK	NGVDPELLVYTVTLINK	3	NGVDPELLVYTVTLINK3	3239.78		
Q62868	Q62868;Q63644	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	0	NGVEEIK	NGVEEIK	2	NGVEEIK2	40412.9	42935.6	47666
P97546	P97546	NPTN_RAT	Nptn	Neuroplastin	1	NGVELTATR	NGVELTATR	2	NGVELTATR2	29642.4	35316.3	31649
P97546	P97546	NPTN_RAT	Nptn	Neuroplastin	1	NGVELTATRK	NGVELTATRK	2	NGVELTATRK2	3976.97	738.863	2610.46
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	NGVIHLIDEVLIPDSAK	NGVIHLIDEVLIPDSAK	2	NGVIHLIDEVLIPDSAK2	26408		
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	NGVIHLIDEVLIPDSAK	NGVIHLIDEVLIPDSAK	3	NGVIHLIDEVLIPDSAK3	27871.1	19724.9	17886.7
A0A8I6AA52	A0A8I6AA52	A0A8I6AA52_RAT	Wdr48	WD repeat-containing protein 48	1	NGVNALQLDPALNR	NGVNALQLDPALNR	2	NGVNALQLDPALNR2	4628.85	7286.09	4765.31
P27791	P27791	KAPCA_RAT	Prkaca	cAMP-dependent protein kinase catalytic subunit alpha	1	NGVNDIK	NGVNDIK	1	NGVNDIK1	2492.12	4115.4	
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	NGVPAVGLK	NGVPAVGLK	2	NGVPAVGLK2	243622	284378	232543
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	NGVSEENLAK	NGVSEENLAK	2	NGVSEENLAK2	181027	173648	187447
A0A8I6AM38	A0A8I6AM38;G3V7Q7	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	0	NGVYLAK	NGVYLAK	2	NGVYLAK2	33235.9	36672.3	40385
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	NGWKPVGDLLIDSLQDHIEK	NGWKPVGDLLIDSLQDHIEK	3	NGWKPVGDLLIDSLQDHIEK3	9681.41	7207.78	11590.5
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	NGWKPVGDLLIDSLQDHIEK	NGWKPVGDLLIDSLQDHIEK	4	NGWKPVGDLLIDSLQDHIEK4	36355.3	30940.6	29809
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	NGWSLLHK	NGWSLLHK	2	NGWSLLHK2	9127.81	12038.2	7074.94
B2GV55	B2GV55;A0A8I6AE35	B2GV55_RAT	Ube2q1	Ubiquitin conjugating enzyme E2 Q1	0	NGWYTPPKEDG	NGWYTPPKEDG	2	NGWYTPPKEDG2	7124.26	8131.42	5275.51
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	NGYCLNTQPGYECYCK	NGYC(UniMod:4)LNTQPGYEC(UniMod:4)YC(UniMod:4)K	3	NGYC(UniMod:4)LNTQPGYEC(UniMod:4)YC(UniMod:4)K3	54660.9	46578	54491.5
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	NGYDFYPK	NGYDFYPK	2	NGYDFYPK2	9370.85	4826.66	8075.22
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	NGYELSPTAAANFTR	NGYELSPTAAANFTR	2	NGYELSPTAAANFTR2	1.05689e+06	1.07106e+06	1.17521e+06
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	NGYELSPTAAANFTR	NGYELSPTAAANFTR	3	NGYELSPTAAANFTR3	19288.3	17291	25823.1
P62961	A0A8I6GL75;P62961;Q62764;A0A8I6ABQ3;D4A3P0	YBOX1_RAT	Ybx1	Y-box-binding protein 1	0	NGYGFINR	NGYGFINR	2	NGYGFINR2	16243.4	29161.2	19036
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	NGYLYHENIR	NGYLYHENIR	2	NGYLYHENIR2	39241.9	31176.8	29793
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	NGYLYHENIR	NGYLYHENIR	3	NGYLYHENIR3	522200	422516	360971
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	NGYLYHENIRR	NGYLYHENIRR	3	NGYLYHENIRR3	14678.7	11780	12255.8
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	NGYPDLVVGAFGVDR	NGYPDLVVGAFGVDR	2	NGYPDLVVGAFGVDR2	133579	148723	142950
Q9EPF2	Q9EPF2	MUC18_RAT	Mcam	Cell surface glycoprotein MUC18	1	NGYPIPQVIWYK	NGYPIPQVIWYK	2	NGYPIPQVIWYK2	14792.9	24165.1	20766.8
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	NGYSLNHQVIHWFWK	NGYSLNHQVIHWFWK	3	NGYSLNHQVIHWFWK3	11533.3	20554	21420.3
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	NGYSLNHQVIHWFWK	NGYSLNHQVIHWFWK	4	NGYSLNHQVIHWFWK4	5284.98	10851.7	15529.9
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	NGYVSDGK	NGYVSDGK	2	NGYVSDGK2	67520.6	63962	88335.4
O88600	O88600;Q66HA8	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	0	NHAAPFSK	NHAAPFSK	2	NHAAPFSK2		316715	
F1LUU1	F1LUU1	F1LUU1_RAT	Itga11	Integrin subunit alpha 11	1	NHAAYLGYTVTSVVSSK	NHAAYLGYTVTSVVSSK	3	NHAAYLGYTVTSVVSSK3		2930.38	
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	NHALLEAAGPSHVAINAISANMDSFSSSR	NHALLEAAGPSHVAINAISANMDSFSSSR	4	NHALLEAAGPSHVAINAISANMDSFSSSR4	3815.35	9386.95	4956
D3ZCQ2	D3ZCQ2	D3ZCQ2_RAT	Alg11	GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase	1	NHALQIK	NHALQIK	2	NHALQIK2	8969.91	7938.75	7426.68
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	NHALQQQLTQLMEK	NHALQQQLTQLMEK	2	NHALQQQLTQLMEK2	4855.56	4887.04	2530.83
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	NHALQQQLTQLMEK	NHALQQQLTQLMEK	3	NHALQQQLTQLMEK3	41416	44191	20246.2
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	NHALVWFDHK	NHALVWFDHK	3	NHALVWFDHK3	17811.8	12735.8	12930.9
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	NHANTWLTAFVLK	NHANTWLTAFVLK	3	NHANTWLTAFVLK3	2955.48	8977.96	3917.37
A0A0G2JTM9	A0A0G2JTM9	A0A0G2JTM9_RAT	Dnajb14	DnaJ heat shock protein family (Hsp40) member B14	1	NHAPGATDAFK	NHAPGATDAFK	2	NHAPGATDAFK2	1467.83	1968.36	2861.23
A0A0G2JTM9	A0A0G2JTM9	A0A0G2JTM9_RAT	Dnajb14	DnaJ heat shock protein family (Hsp40) member B14	1	NHAPGATDAFKK	NHAPGATDAFKK	3	NHAPGATDAFKK3		1277.16	
F7F4L4	F7F4L4	F7F4L4_RAT	Dnajb12	DnaJ heat shock protein family (Hsp40) member B12	1	NHAPGATEAFK	NHAPGATEAFK	2	NHAPGATEAFK2	2800.85	8309.66	6382.32
F7F4L4	F7F4L4	F7F4L4_RAT	Dnajb12	DnaJ heat shock protein family (Hsp40) member B12	1	NHAPGATEAFK	NHAPGATEAFK	3	NHAPGATEAFK3	2446.45	1525.73	3940.5
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	NHAVVCQGCHNAIDPEVQR	NHAVVC(UniMod:4)QGC(UniMod:4)HNAIDPEVQR	3	NHAVVC(UniMod:4)QGC(UniMod:4)HNAIDPEVQR3	81295.1	56870.3	60457.5
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	NHAVVCQGCHNAIDPEVQR	NHAVVC(UniMod:4)QGC(UniMod:4)HNAIDPEVQR	4	NHAVVC(UniMod:4)QGC(UniMod:4)HNAIDPEVQR4	175679	149751	193831
M0RD03	M0RD03;A0A8I6AMY8	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	0	NHDEESLECLCR	NHDEESLEC(UniMod:4)LC(UniMod:4)R	2	NHDEESLEC(UniMod:4)LC(UniMod:4)R2	25325.8	19508.3	15651.8
M0RD03	M0RD03;A0A8I6AMY8	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	0	NHDEESLECLCR	NHDEESLEC(UniMod:4)LC(UniMod:4)R	3	NHDEESLEC(UniMod:4)LC(UniMod:4)R3	138226	127961	118387
Q6IFU8	Q6IFU7;Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	0	NHEEEMNALR	NHEEEMNALR	2	NHEEEMNALR2	42420.8	22543.6	23078.9
Q6IFU8	Q6IFU7;Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	0	NHEEEMNALR	NHEEEMNALR	3	NHEEEMNALR3	41628.3	41822.5	39281.1
P09215	P09215	KPCD_RAT	Prkcd	Protein kinase C delta type	1	NHEFIATFFGQPTFCSVCK	NHEFIATFFGQPTFC(UniMod:4)SVC(UniMod:4)K	3	NHEFIATFFGQPTFC(UniMod:4)SVC(UniMod:4)K3	14057.6		17431.8
D4A4T0	D4A4T0	D4A4T0_RAT	Stub1	STIP1 homology and U-box containing protein 1	1	NHEGDEDDGHIR	NHEGDEDDGHIR	2	NHEGDEDDGHIR2			1895.97
D4A4T0	D4A4T0	D4A4T0_RAT	Stub1	STIP1 homology and U-box containing protein 1	1	NHEGDEDDGHIR	NHEGDEDDGHIR	3	NHEGDEDDGHIR3			2812.89
D4A731	D4A731	D4A731_RAT	Ankib1	RBR-type E3 ubiquitin transferase	1	NHEHSYQLEQR	NHEHSYQLEQR	3	NHEHSYQLEQR3	12073.1	8597.04	6902.67
Q5XIN7	Q5XIN7	PMGT1_RAT	Pomgnt1	Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1	1	NHFLVVGVPASPYSVK	NHFLVVGVPASPYSVK	3	NHFLVVGVPASPYSVK3	20539.7	10729.9	10904.2
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	NHFNAACGVR	NHFNAAC(UniMod:4)GVR	2	NHFNAAC(UniMod:4)GVR2	44120.1	34620.5	39065.1
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	NHFNAACGVR	NHFNAAC(UniMod:4)GVR	3	NHFNAAC(UniMod:4)GVR3	142957	137437	138897
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	NHFPGEAETLYNSLEPSYQK	NHFPGEAETLYNSLEPSYQK	3	NHFPGEAETLYNSLEPSYQK3	19305.5	18953	17647.3
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	NHFSIAFIIYK	NHFSIAFIIYK	3	NHFSIAFIIYK3	2863.57	1227.32	
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	NHFSSTREEMEELK	NHFSSTREEMEELK	3	NHFSSTREEMEELK3	15959.2	16547.1	28634.8
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	NHFSSTREEMEELKK	NHFSSTREEMEELKK	4	NHFSSTREEMEELKK4	13289.6	16116.9	19348.6
A0A0G2K5L2	A0A0G2K5L2	GHC1_RAT	Slc25a22	Mitochondrial glutamate carrier 1	1	NHGIAGLYK	NHGIAGLYK	2	NHGIAGLYK2	2990.6		2970.42
Q6V0K7	Q6V0K7	OIT3_RAT	Oit3	Oncoprotein-induced transcript 3 protein	1	NHGIFPFTLEIFK	NHGIFPFTLEIFK	2	NHGIFPFTLEIFK2	4728.31	5231.7	2849.53
Q6V0K7	Q6V0K7	OIT3_RAT	Oit3	Oncoprotein-induced transcript 3 protein	1	NHGIFPFTLEIFK	NHGIFPFTLEIFK	3	NHGIFPFTLEIFK3	21113.6	31183.9	24939.3
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	NHGILSGR	NHGILSGR	2	NHGILSGR2	26311.9	24612.2	18948.8
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	NHGLHHCNSFLEELAK	NHGLHHC(UniMod:4)NSFLEELAK	3	NHGLHHC(UniMod:4)NSFLEELAK3	2611.17	7866.49	2723.31
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	NHGLHHCNSFLEELAK	NHGLHHC(UniMod:4)NSFLEELAK	4	NHGLHHC(UniMod:4)NSFLEELAK4	30069.8	63595.1	46808.1
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	NHGLYVK	NHGLYVK	1	NHGLYVK1	5087.64	2313.75	9063.96
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	NHGLYVK	NHGLYVK	2	NHGLYVK2	259739	179115	252662
F1M7Q7	F1M7Q7	F1M7Q7_RAT	Otud4	ubiquitinyl hydrolase 1	1	NHGNSADLPLSR	NHGNSADLPLSR	3	NHGNSADLPLSR3	5429.77	4396.29	4765.51
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	NHGQRPATEQLMK	NHGQRPATEQLMK	2	NHGQRPATEQLMK2	12461.1	12253.5	7334.6
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	NHGQRPATEQLMK	NHGQRPATEQLMK	3	NHGQRPATEQLMK3	378618	335726	321552
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	NHGVLHTSVVLLTEMCER	NHGVLHTSVVLLTEMC(UniMod:4)ER	3	NHGVLHTSVVLLTEMC(UniMod:4)ER3	22123.9	8465.21	22488.8
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	NHGVLHTSVVLLTEMCER	NHGVLHTSVVLLTEMC(UniMod:4)ER	4	NHGVLHTSVVLLTEMC(UniMod:4)ER4	20515.5	14142.8	11486
Q02253	Q02253	MMSA_RAT	Aldh6a1	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial	1	NHGVVMPDANK	NHGVVMPDANK	2	NHGVVMPDANK2	1796.8	1148.76	1551.33
Q02253	Q02253	MMSA_RAT	Aldh6a1	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial	1	NHGVVMPDANK	NHGVVMPDANK	3	NHGVVMPDANK3	10060.4	11069.5	15701.2
Q02253	Q02253	MMSA_RAT	Aldh6a1	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial	1	NHGVVMPDANKENTLNQLVGAAFGAAGQR	NHGVVMPDANKENTLNQLVGAAFGAAGQR	4	NHGVVMPDANKENTLNQLVGAAFGAAGQR4	34409.3	33429.7	51104.3
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	NHHVHLYPWTSFDGAEASNFDIK	NHHVHLYPWTSFDGAEASNFDIK	3	NHHVHLYPWTSFDGAEASNFDIK3	5802.32		1971.15
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	NHHVHLYPWTSFDGAEASNFDIK	NHHVHLYPWTSFDGAEASNFDIK	4	NHHVHLYPWTSFDGAEASNFDIK4	15384.8	8467.96	6508.25
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	NHIADFAPEVAWVTR	NHIADFAPEVAWVTR	2	NHIADFAPEVAWVTR2	19758.3	17653.1	15596.7
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	NHIADFAPEVAWVTR	NHIADFAPEVAWVTR	3	NHIADFAPEVAWVTR3	35673.8	32015.1	47205.4
F7FNG5	F7FNG5	F7FNG5_RAT	Cul4a	Cullin 4A	1	NHIISDR	NHIISDR	2	NHIISDR2	6455.35		
D3Z9C0	D3Z9C0	D3Z9C0_RAT	Mios	Meiosis regulator for oocyte development	1	NHILAGNEDPQLK	NHILAGNEDPQLK	3	NHILAGNEDPQLK3	8749.73	6545.42	6357.65
D3ZRX9	D3ZRX9	D3ZRX9_RAT	Cnn2	Calponin	1	NHILPPMDHCTISLQMGTNK	NHILPPMDHC(UniMod:4)TISLQMGTNK	3	NHILPPMDHC(UniMod:4)TISLQMGTNK3	264301	252637	174807
D3ZRX9	D3ZRX9	D3ZRX9_RAT	Cnn2	Calponin	1	NHILPPMDHCTISLQMGTNK	NHILPPMDHC(UniMod:4)TISLQMGTNK	4	NHILPPMDHC(UniMod:4)TISLQMGTNK4	504335	559605	497507
G3V972	G3V972	G3V972_RAT	Gemin6	Gem (nuclear organelle) associated protein 6	1	NHIPVTEEGDTQR	NHIPVTEEGDTQR	3	NHIPVTEEGDTQR3	3096.4		
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	NHLALSVK	NHLALSVK	2	NHLALSVK2	9836.76	10152.6	7667.69
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	NHLCDLLGVPRPQLVPK	NHLC(UniMod:4)DLLGVPRPQLVPK	3	NHLC(UniMod:4)DLLGVPRPQLVPK3	3861.6	3404.45	3240.88
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	NHLCDLLGVPRPQLVPK	NHLC(UniMod:4)DLLGVPRPQLVPK	4	NHLC(UniMod:4)DLLGVPRPQLVPK4	6851.75	13806.3	11124.6
O54857	O54857	PTEN_RAT	Pten	Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN	1	NHLDYRPVALLFHK	NHLDYRPVALLFHK	4	NHLDYRPVALLFHK4	44241.9	40342.9	67001.9
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	NHLEYLSTLK	NHLEYLSTLK	2	NHLEYLSTLK2	59075.2	48134.4	48334.3
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	NHLEYLSTLK	NHLEYLSTLK	3	NHLEYLSTLK3	30039.8	35664.5	41816.3
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	NHLLETTPK	NHLLETTPK	2	NHLLETTPK2	17769.5	24422.6	15157.9
P55260	P55260	ANXA4_RAT	Anxa4	Annexin A4	1	NHLLHVFDEYK	NHLLHVFDEYK	3	NHLLHVFDEYK3	12869.7		5545.25
P55260	P55260	ANXA4_RAT	Anxa4	Annexin A4	1	NHLLHVFDEYKR	NHLLHVFDEYKR	4	NHLLHVFDEYKR4	3566.83	851.039	6669.21
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	NHLQEIR	NHLQEIR	2	NHLQEIR2	13025.5	23598.9	15053.9
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	NHLTQFSSHFK	NHLTQFSSHFK	3	NHLTQFSSHFK3	6298.95	12543.8	5539.64
P47853	P47853	PGS1_RAT	Bgn	Biglycan	1	NHLVEIPPNLPSSLVELR	NHLVEIPPNLPSSLVELR	3	NHLVEIPPNLPSSLVELR3	51369.2	56382.4	36629.8
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	NHLYVYPLQLK	NHLYVYPLQLK	2	NHLYVYPLQLK2	1938.99	1555.44	3192.99
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	NHLYVYPLQLK	NHLYVYPLQLK	3	NHLYVYPLQLK3	21994.3	17745.8	20368.8
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	NHMDITTPPLPPVAPEVLR	NHMDITTPPLPPVAPEVLR	3	NHMDITTPPLPPVAPEVLR3	105534	126596	122636
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	NHMFSIQIMK	NHMFSIQIMK	2	NHMFSIQIMK2	50882.1	88575.4	25804.5
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	NHMFSIQIMK	NHMFSIQIMK	3	NHMFSIQIMK3	3424.67	3033.24	2593.89
Q5U303	Q5U303	TAB2_RAT	Tab2	TGF-beta-activated kinase 1 and MAP3K7-binding protein 2	1	NHMTSLNLDLQSQNVYHHGR	NHMTSLNLDLQSQNVYHHGR	4	NHMTSLNLDLQSQNVYHHGR4		6970.96	
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	NHNAFLASLTSQK	NHNAFLASLTSQK	3	NHNAFLASLTSQK3	86017.7	78086.6	74466.1
Q5FVH4	Q5FVH4	AKTIP_RAT	Aktip	AKT-interacting protein	1	NHNHIWQVLMYAR	NHNHIWQVLMYAR	3	NHNHIWQVLMYAR3	6838.96	6783.46	6172.48
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	NHNQYVNPSGVATFFESIK	NHNQYVNPSGVATFFESIK	3	NHNQYVNPSGVATFFESIK3	2575.43	4188.62	4253.5
P06760	P06760	BGLR_RAT	Gusb	Beta-glucuronidase	1	NHPAVVMWSVANEPVSSLKPAGYYFK	NHPAVVMWSVANEPVSSLKPAGYYFK	4	NHPAVVMWSVANEPVSSLKPAGYYFK4	16918.4	16068.5	8567.9
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	NHPLHIR	NHPLHIR	2	NHPLHIR2	47545.6		44526.6
B5DF51	B5DF51	EMC5_RAT	Mmgt1	ER membrane protein complex subunit 5	1	NHPSFYVFNHR	NHPSFYVFNHR	2	NHPSFYVFNHR2	8815.65		7581.05
B5DF51	B5DF51	EMC5_RAT	Mmgt1	ER membrane protein complex subunit 5	1	NHPSFYVFNHR	NHPSFYVFNHR	3	NHPSFYVFNHR3	68240.3	56374.6	66100.3
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	NHPTLIEYHTK	NHPTLIEYHTK	2	NHPTLIEYHTK2	6.04015e+06	6.15047e+06	5.35582e+06
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	NHPTLIEYHTK	NHPTLIEYHTK	3	NHPTLIEYHTK3	521033	457233	411641
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	NHPTLIEYHTKASDHLK	NHPTLIEYHTKASDHLK	4	NHPTLIEYHTKASDHLK4	2040.55	5229.27	7221.88
E9PT51	E9PT51	E9PT51_RAT	Poldip2	DNA polymerase delta interacting protein 2	1	NHPWLELSDVHR	NHPWLELSDVHR	3	NHPWLELSDVHR3	174435	140523	130879
P54645	P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	1	NHQDPLAVAYHLIIDNRR	NHQDPLAVAYHLIIDNRR	4	NHQDPLAVAYHLIIDNRR4	8648.14	22967.2	8875.37
A0A8I6AL43	A0A8I6AL43	A0A8I6AL43_RAT	Ate1	Arginyl-tRNA--protein transferase 1	1	NHQEDPSEEAVVLEYANLVGQK	NHQEDPSEEAVVLEYANLVGQK	3	NHQEDPSEEAVVLEYANLVGQK3	5549.87	5629.76	3230.98
G3V828	G3V828	G3V828_RAT	Cnpy3	Canopy FGF signaling regulator 3	1	NHQEEDLTQFLCANHVLK	NHQEEDLTQFLC(UniMod:4)ANHVLK	3	NHQEEDLTQFLC(UniMod:4)ANHVLK3	3186.13	3409.59	3095.41
P52873	P52873	PYC_RAT	Pc	Pyruvate carboxylase, mitochondrial	1	NHQGLLLMDTTFR	NHQGLLLMDTTFR	3	NHQGLLLMDTTFR3	7792.48	6782.82	3663.26
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	NHQLEVTPK	NHQLEVTPK	2	NHQLEVTPK2	40179.9	36045.4	52794.8
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	NHQLYCNDCYLR	NHQLYC(UniMod:4)NDC(UniMod:4)YLR	3	NHQLYC(UniMod:4)NDC(UniMod:4)YLR3	12060.7	7930.72	1892.55
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	NHQNLLDSLEQYVK	NHQNLLDSLEQYVK	2	NHQNLLDSLEQYVK2	10528.2	12668.1	3888.16
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	NHQNLLDSLEQYVK	NHQNLLDSLEQYVK	3	NHQNLLDSLEQYVK3	93322.2	87302.6	102986
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	NHREEVVGVAQAINK	NHREEVVGVAQAINK	2	NHREEVVGVAQAINK2	1589.11		
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	NHREEVVGVAQAINK	NHREEVVGVAQAINK	3	NHREEVVGVAQAINK3	380396	356120	331672
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	NHREEVVGVAQAINK	NHREEVVGVAQAINK	4	NHREEVVGVAQAINK4	240440	226361	260733
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	NHREEVVGVAQAINKK	NHREEVVGVAQAINKK	3	NHREEVVGVAQAINKK3	44149	36370.7	27580
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	NHREEVVGVAQAINKK	NHREEVVGVAQAINKK	4	NHREEVVGVAQAINKK4	637514	746445	725912
G3V7E6	G3V7E6	G3V7E6_RAT	Pcm1	Pericentriolar material 1	1	NHRPVSADGNYRPLAK	NHRPVSADGNYRPLAK	4	NHRPVSADGNYRPLAK4			4005.2
A0A0G2K618	A0A0G2K618;Q6P7A1	A0A0G2K618_RAT	Large1	LARGE xylosyl- and glucuronyltransferase 1	0	NHRPWPALGR	NHRPWPALGR	3	NHRPWPALGR3	7863.51		6650.24
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	NHSPNHEEPSR	NHSPNHEEPSR	3	NHSPNHEEPSR3			8181.09
A0A8I5ZTX9	A0A8I5ZTX9	A0A8I5ZTX9_RAT	C2h1orf162	Hypothetical LOC100363228	1	NHSSGLDPTVYSQIK	NHSSGLDPTVYSQIK	2	NHSSGLDPTVYSQIK2	15380.2	7782.77	8274.01
A0A8I5ZTX9	A0A8I5ZTX9	A0A8I5ZTX9_RAT	C2h1orf162	Hypothetical LOC100363228	1	NHSSGLDPTVYSQIK	NHSSGLDPTVYSQIK	3	NHSSGLDPTVYSQIK3	191070	201808	199264
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	NHSTSFSLSNLTLPTK	NHSTSFSLSNLTLPTK	3	NHSTSFSLSNLTLPTK3		12658.1	14849.1
P52164	P52164	MAX_RAT	Max	Protein max	1	NHTHQQDIDDLKR	NHTHQQDIDDLKR	4	NHTHQQDIDDLKR4		10035.1	7759.9
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	NHTLSELLQLR	NHTLSELLQLR	2	NHTLSELLQLR2	2473.15	2395.29	
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	NHTLSELLQLR	NHTLSELLQLR	3	NHTLSELLQLR3	15741.5	12796	16025.1
Q66H54	Q66H54	FHI1B_RAT	Fhip1b	FHF complex subunit HOOK-interacting protein 1B	1	NHTYQMLTLLAEDR	NHTYQMLTLLAEDR	3	NHTYQMLTLLAEDR3	5385.09	2700.66	3224.26
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	NHVAQLLK	NHVAQLLK	2	NHVAQLLK2	31403.5	35897.5	29629.3
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	NHVELLLR	NHVELLLR	2	NHVELLLR2	18317.4	14583.2	18002.3
D3ZU48	D3ZU48	D3ZU48_RAT	Klhdc4	Kelch domain containing 4	1	NHVGPDAK	NHVGPDAK	1	NHVGPDAK1			1302.64
F1LTR1	F1LTR1	WDR26_RAT	Wdr26	WD repeat-containing protein 26	1	NHVMEGDWDK	NHVMEGDWDK	2	NHVMEGDWDK2	5591.37	5069.88	
F1LTR1	F1LTR1	WDR26_RAT	Wdr26	WD repeat-containing protein 26	1	NHVMEGDWDK	NHVMEGDWDK	3	NHVMEGDWDK3	15626	9460.09	10915.2
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	NHVVEVSDSGLITIAGGK	NHVVEVSDSGLITIAGGK	3	NHVVEVSDSGLITIAGGK3	35887.3	28027.8	28328.1
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	NHYIPLVGIK	NHYIPLVGIK	2	NHYIPLVGIK2	2795.9	2839.65	8023.73
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	NHYIPLVGIK	NHYIPLVGIK	3	NHYIPLVGIK3	5906.85	6094.63	4733.25
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	NHYNEEMSNLR	NHYNEEMSNLR	3	NHYNEEMSNLR3	9130.63	2498.92	8787.75
O35217	O35217	MINP1_RAT	Minpp1	Multiple inositol polyphosphate phosphatase 1	1	NHYQDILQSCQTSK	NHYQDILQSC(UniMod:4)QTSK	2	NHYQDILQSC(UniMod:4)QTSK2	4097.44	3767.04	2497.2
O35217	O35217	MINP1_RAT	Minpp1	Multiple inositol polyphosphate phosphatase 1	1	NHYQDILQSCQTSK	NHYQDILQSC(UniMod:4)QTSK	3	NHYQDILQSC(UniMod:4)QTSK3	67012.2	55404.6	64635.2
Q8K3X8	Q8K3X8	HSBP1_RAT	Hsbp1	Heat shock factor-binding protein 1	1	NIADLMTQAGVEELDAENKIPTAQK	NIADLMTQAGVEELDAENKIPTAQK	3	NIADLMTQAGVEELDAENKIPTAQK3	10487	6132.81	12528.5
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	NIAFFSTNCVEGTAR	NIAFFSTNC(UniMod:4)VEGTAR	2	NIAFFSTNC(UniMod:4)VEGTAR2	69890.5	57594.2	59459.4
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	NIAFVIDVSGSMSGR	NIAFVIDVSGSMSGR	2	NIAFVIDVSGSMSGR2	126503	196619	267245
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	NIAFVIDVSGSMSGR	NIAFVIDVSGSMSGR	3	NIAFVIDVSGSMSGR3	254307	209044	211921
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	NIAFVIDVSGSMSGRK	NIAFVIDVSGSMSGRK	2	NIAFVIDVSGSMSGRK2	97902.6	115938	98496.1
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	NIAFVIDVSGSMSGRK	NIAFVIDVSGSMSGRK	3	NIAFVIDVSGSMSGRK3	909375	1.25035e+06	1.06287e+06
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	NIAFVIDVSGSMSGRKIQQTR	NIAFVIDVSGSMSGRKIQQTR	3	NIAFVIDVSGSMSGRKIQQTR3	6317.42	14582.2	8838.05
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	NIAFVIDVSGSMSGRKIQQTR	NIAFVIDVSGSMSGRKIQQTR	4	NIAFVIDVSGSMSGRKIQQTR4	25616.7	24052.8	14007.8
Q63632	Q63632	S12A4_RAT	Slc12a4	Solute carrier family 12 member 4	1	NIAFYPSNHER	NIAFYPSNHER	3	NIAFYPSNHER3	11141.1	8297.66	8203.17
Q8CGZ2	Q8CGZ2	ADIP_RAT	Ssx2ip	Afadin- and alpha-actinin-binding protein	1	NIAMDVLNYVGR	NIAMDVLNYVGR	2	NIAMDVLNYVGR2	11184.1	11898	9601.58
Q68FX0	Q68FX0	IDH3B_RAT	Idh3B	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	NIANPTAMLLSASNMLR	NIANPTAMLLSASNMLR	2	NIANPTAMLLSASNMLR2	59639.9	60698.8	55413.9
Q68FX0	Q68FX0	IDH3B_RAT	Idh3B	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	NIANPTAMLLSASNMLR	NIANPTAMLLSASNMLR	3	NIANPTAMLLSASNMLR3	8973.15	12931.5	15912
P41565	P41565	IDHG1_RAT	Idh3g	Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial	1	NIANPTATLLASCMMLDHLK	NIANPTATLLASC(UniMod:4)MMLDHLK	3	NIANPTATLLASC(UniMod:4)MMLDHLK3	39006.4	37577.9	40629.5
A0A8I6AM26	A0A8I6AM26	A0A8I6AM26_RAT	Srrt	Arsenite-resistance protein 2	1	NIAPNISR	NIAPNISR	2	NIAPNISR2	129291	62248.1	96835.1
Q9Z2K5	Q9Z2K5	LST8_RAT	Mlst8	Target of rapamycin complex subunit LST8	1	NIASVGFHEDGR	NIASVGFHEDGR	2	NIASVGFHEDGR2	6921.43	6744.32	9606.17
Q9Z2K5	Q9Z2K5	LST8_RAT	Mlst8	Target of rapamycin complex subunit LST8	1	NIASVGFHEDGR	NIASVGFHEDGR	3	NIASVGFHEDGR3	6711.21	10573.7	12203.3
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	NIATQLESSWELHTNR	NIATQLESSWELHTNR	3	NIATQLESSWELHTNR3		10875	7045.97
F1LP90	A0A0G2K490;A0A8I5ZLV4;F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	0	NIATYYGAFIK	NIATYYGAFIK	2	NIATYYGAFIK2	327231	357972	345062
P84083	P84083;P61751	ARF5_RAT	Arf5	ADP-ribosylation factor 5	0	NICFTVWDVGGQDK	NIC(UniMod:4)FTVWDVGGQDK	2	NIC(UniMod:4)FTVWDVGGQDK2	134966	133669	124629
P84083	P84083;P61751	ARF5_RAT	Arf5	ADP-ribosylation factor 5	0	NICFTVWDVGGQDK	NIC(UniMod:4)FTVWDVGGQDK	3	NIC(UniMod:4)FTVWDVGGQDK3	8142.6	3951.95	9786.24
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	NICQQVNIK	NIC(UniMod:4)QQVNIK	2	NIC(UniMod:4)QQVNIK2	114020	98050.9	107502
D3ZTW9	D3ZTW9	D3ZTW9_RAT	Exog	Exo/endonuclease G	1	NICSVDTCK	NIC(UniMod:4)SVDTC(UniMod:4)K	2	NIC(UniMod:4)SVDTC(UniMod:4)K2	9796.91	8040.51	13377.6
D3ZEF9	D3ZEF9	D3ZEF9_RAT	B3gnt2	Hexosyltransferase	1	NICSYIDLMLVHSR	NIC(UniMod:4)SYIDLMLVHSR	3	NIC(UniMod:4)SYIDLMLVHSR3	16638.2	8541.05	
D4A7B6	D4A7B6	D4A7B6_RAT	Tmem87b	Transmembrane protein 87B	1	NIDCWTTK	NIDC(UniMod:4)WTTK	2	NIDC(UniMod:4)WTTK2	10941.2	14897.5	16660.4
G3V7N6	G3V7N6	G3V7N6_RAT	Mboat7	Membrane bound O-acyltransferase domain containing 7-like 1	1	NIDCYGTDFCVR	NIDC(UniMod:4)YGTDFC(UniMod:4)VR	2	NIDC(UniMod:4)YGTDFC(UniMod:4)VR2	26116.1	28565	30206.4
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	NIDDCPNHK	NIDDC(UniMod:4)PNHK	2	NIDDC(UniMod:4)PNHK2			6827.62
P61354	P61354;M0R7P0	RL27_RAT	Rpl27	Large ribosomal subunit protein eL27	0	NIDDGTSDRPYSHALVAGIDR	NIDDGTSDRPYSHALVAGIDR	3	NIDDGTSDRPYSHALVAGIDR3	43341.3	12434.4	5098.38
P61354	P61354;M0R7P0	RL27_RAT	Rpl27	Large ribosomal subunit protein eL27	0	NIDDGTSDRPYSHALVAGIDR	NIDDGTSDRPYSHALVAGIDR	4	NIDDGTSDRPYSHALVAGIDR4	139310	43588.2	23454.4
D4A183	D4A183	D4A183_RAT	Vnn3	Vanin 3	1	NIDILENAIK	NIDILENAIK	2	NIDILENAIK2	8757.9	10826.5	11862.7
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	NIDINDVTPNCR	NIDINDVTPNC(UniMod:4)R	2	NIDINDVTPNC(UniMod:4)R2	97644.3	93248.1	128960
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	NIDINDVTPNCR	NIDINDVTPNC(UniMod:4)R	3	NIDINDVTPNC(UniMod:4)R3	13725.5	5269.77	6036.53
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	NIDKAPLNIAVTGETGAGK	NIDKAPLNIAVTGETGAGK	2	NIDKAPLNIAVTGETGAGK2	7606.96	5679.03	2605.41
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	NIDKAPLNIAVTGETGAGK	NIDKAPLNIAVTGETGAGK	3	NIDKAPLNIAVTGETGAGK3	32328	44509	37937.2
Q9JHW5	Q9JHW5	VAMP7_RAT	Vamp7	Vesicle-associated membrane protein 7	1	NIDLVAQR	NIDLVAQR	2	NIDLVAQR2	357315	311381	363766
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	NIDLVYK	NIDLVYK	2	NIDLVYK2	64186.1	54266.6	54948.2
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	NIDNFLNR	NIDNFLNR	2	NIDNFLNR2	200895	204435	218797
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	NIDNFLSR	NIDNFLSR	2	NIDNFLSR2	44310	34309.7	46386.1
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	NIDNPAVADIYTEHAHQVVVAK	NIDNPAVADIYTEHAHQVVVAK	3	NIDNPAVADIYTEHAHQVVVAK3	89387.3	67333.6	66191.5
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	NIDNPAVADIYTEHAHQVVVAK	NIDNPAVADIYTEHAHQVVVAK	4	NIDNPAVADIYTEHAHQVVVAK4	432173	458869	461098
D3ZGG8	D3ZGG8	D3ZGG8_RAT	Hps3	Hermansky-Pudlak syndrome 3 protein homolog	1	NIDPLIALHYLR	NIDPLIALHYLR	3	NIDPLIALHYLR3	2766.73	6074.22	1922.73
P35281	P35281	RAB10_RAT	Rab10	Ras-related protein Rab-10	1	NIDQHANEDVER	NIDQHANEDVER	3	NIDQHANEDVER3	354663	262194	298502
P07314	P07314	GGT1_RAT	Ggt1	Glutathione hydrolase 1 proenzyme	1	NIDQVVTAGLK	NIDQVVTAGLK	2	NIDQVVTAGLK2	42582.7	30235	10273.7
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	NIDRTDLQTITNDPR	NIDRTDLQTITNDPR	3	NIDRTDLQTITNDPR3		6505.42	
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	NIDSEEVGK	NIDSEEVGK	2	NIDSEEVGK2	7932.3	12836.8	
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	NIDSNPYDTDK	NIDSNPYDTDK	2	NIDSNPYDTDK2	36915.2	33801	34210
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	NIEASASDLPNLGQLR	NIEASASDLPNLGQLR	2	NIEASASDLPNLGQLR2	7797.59	9285.8	5229.5
P02401	P02401;D4A4D5;D3ZN03	RLA2_RAT	Rplp2	Large ribosomal subunit protein P2	0	NIEDVIAQGVGK	NIEDVIAQGVGK	2	NIEDVIAQGVGK2	673076	756296	757969
P02401	P02401;D4A4D5;D3ZN03	RLA2_RAT	Rplp2	Large ribosomal subunit protein P2	0	NIEDVIAQGVGK	NIEDVIAQGVGK	3	NIEDVIAQGVGK3	23102.4	28929.1	24018.8
P35280	P35280	RAB8A_RAT	Rab8a	Ras-related protein Rab-8A	1	NIEEHASADVEK	NIEEHASADVEK	2	NIEEHASADVEK2	11940	13957.7	13130.4
P35280	P35280	RAB8A_RAT	Rab8a	Ras-related protein Rab-8A	1	NIEEHASADVEK	NIEEHASADVEK	3	NIEEHASADVEK3	57890	38921.6	55499.4
P70550	P70550	RAB8B_RAT	Rab8b	Ras-related protein Rab-8B	1	NIEEHASSDVER	NIEEHASSDVER	2	NIEEHASSDVER2	71135.4	63098.2	51932.9
P70550	P70550	RAB8B_RAT	Rab8b	Ras-related protein Rab-8B	1	NIEEHASSDVER	NIEEHASSDVER	3	NIEEHASSDVER3	485654	513633	539705
D3ZBT4	D3ZBT4	D3ZBT4_RAT	Mtf1	Metal-regulatory transcription factor 1	1	NIEGATLTLQSECPETK	NIEGATLTLQSEC(UniMod:4)PETK	2	NIEGATLTLQSEC(UniMod:4)PETK2	2728.54	1471.04	2834.18
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	NIEIYIQR	NIEIYIQR	2	NIEIYIQR2	12036.6	11575.3	
P48004	P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	1	NIELAVMR	NIELAVMR	1	NIELAVMR1	10340	12548.7	10347.5
P48004	P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	1	NIELAVMR	NIELAVMR	2	NIELAVMR2	3.55748e+06	3.50496e+06	3.88691e+06
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	NIELICQENEGENDPVLQR	NIELIC(UniMod:4)QENEGENDPVLQR	3	NIELIC(UniMod:4)QENEGENDPVLQR3	304770	287674	365280
Q4V8E4	Q4V8E4	CFA36_RAT	Cfap36	Cilia- and flagella-associated protein 36	1	NIEMQLQAIR	NIEMQLQAIR	2	NIEMQLQAIR2	19769.9	19517.8	12893.7
F1M386	F1M386;A0A8I5YCN5	RPGF2_RAT	Rapgef2	Rap guanine nucleotide exchange factor 2	0	NIEPTEYIDDLFK	NIEPTEYIDDLFK	2	NIEPTEYIDDLFK2		13212.4	7886.43
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	NIEPTHAPFIEK	NIEPTHAPFIEK	2	NIEPTHAPFIEK2	5391.59	7244.32	5535.89
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	NIEPTHAPFIEK	NIEPTHAPFIEK	3	NIEPTHAPFIEK3	50728.1	58283.1	46693.5
F7FHP0	F7FHP0	F7FHP0_RAT	Angptl3	Angiopoietin-like 3	1	NIEQDDLPADCSAIYNR	NIEQDDLPADC(UniMod:4)SAIYNR	3	NIEQDDLPADC(UniMod:4)SAIYNR3	11234.6	8480.93	7772.51
Q9QZH7	Q9QZH7	FXL20_RAT	Fbxl20	F-box/LRR-repeat protein 20	1	NIEVLSLNGCTK	NIEVLSLNGC(UniMod:4)TK	2	NIEVLSLNGC(UniMod:4)TK2		6971.81	4371.01
A0A8I5YBR2	A0A8I5YBR2	A0A8I5YBR2_RAT	Cops6	COP9 signalosome complex subunit 6	1	NIEVMNSFELLSHTVEK	NIEVMNSFELLSHTVEK	3	NIEVMNSFELLSHTVEK3	48405	60621	40568.1
A0A0G2QC37	A0A0G2QC37	A0A0G2QC37_RAT	Dcp2	Decapping mRNA 2	1	NIEWFSIEK	NIEWFSIEK	2	NIEWFSIEK2	7077.67	7312.54	5733.3
Q3KR59	Q3KR59	UBP10_RAT	Usp10	Ubiquitin carboxyl-terminal hydrolase 10	1	NIEYPVDLEISR	NIEYPVDLEISR	2	NIEYPVDLEISR2	20568	15789.5	15755.6
P38652	P38652	PGM1_RAT	Pgm1	Phosphoglucomutase-1	1	NIFDFNALK	NIFDFNALK	2	NIFDFNALK2	25407.5	21790	26690.4
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	NIFEKPFMAR	NIFEKPFMAR	3	NIFEKPFMAR3	62900	80924.4	57581.7
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	NIFESFVDYVAVEQLDGDNK	NIFESFVDYVAVEQLDGDNK	3	NIFESFVDYVAVEQLDGDNK3	3952.36		3015.14
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	NIFHLFHDVVPTYHK	NIFHLFHDVVPTYHK	4	NIFHLFHDVVPTYHK4	5336.18	8208.93	5177.61
Q68FT7	Q68FT7	Q68FT7_RAT	Farsb	Phenylalanine--tRNA ligase beta subunit	1	NIFIECTGTDLTK	NIFIEC(UniMod:4)TGTDLTK	2	NIFIEC(UniMod:4)TGTDLTK2	9421.19	7600.71	7633.02
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	NIFLNQVLTEINK	NIFLNQVLTEINK	2	NIFLNQVLTEINK2	13167.5	10523.8	10098.8
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	NIFLNQVLTEINKEIEGVTK	NIFLNQVLTEINKEIEGVTK	3	NIFLNQVLTEINKEIEGVTK3	19110.9		
P48450	P48450	LSS_RAT	Lss	Lanosterol synthase	1	NIFPIWALGR	NIFPIWALGR	2	NIFPIWALGR2	15891.7	18022.3	25468.2
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	NIFPYHEVR	NIFPYHEVR	2	NIFPYHEVR2		3264.58	
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	NIFPYHEVR	NIFPYHEVR	3	NIFPYHEVR3	6246.84	3435.88	9043.54
Q5QJC9	Q5QJC9	BAG5_RAT	Bag5	BAG family molecular chaperone regulator 5	1	NIFQEAQALVK	NIFQEAQALVK	2	NIFQEAQALVK2	18411.6	13632.4	11886.5
P24268	P24268	CATD_RAT	Ctsd	Cathepsin D	1	NIFSFYLNR	NIFSFYLNR	2	NIFSFYLNR2	82390.5	96144.1	79898.3
Q62825	Q62825	EXOC3_RAT	Exoc3	Exocyst complex component 3	1	NIFSVPEIVR	NIFSVPEIVR	2	NIFSVPEIVR2	44336.1	55700	41016.7
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	NIFVLQQNLTNITMSR	NIFVLQQNLTNITMSR	2	NIFVLQQNLTNITMSR2	8502.63	3829.8	6902.8
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	NIGDINQDGYPDIAVGAPYDDLGK	NIGDINQDGYPDIAVGAPYDDLGK	3	NIGDINQDGYPDIAVGAPYDDLGK3	250532	231519	357034
Q5GFD9	Q5GFD9	IMPCT_RAT	Impact	Protein IMPACT	1	NIGESILYQWVEK	NIGESILYQWVEK	2	NIGESILYQWVEK2		4999.65	6077.61
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	NIGFSWIEVTILKPHLQVHATPER	NIGFSWIEVTILKPHLQVHATPER	3	NIGFSWIEVTILKPHLQVHATPER3	33905.1	29975.1	32682.6
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	NIGFSWIEVTILKPHLQVHATPER	NIGFSWIEVTILKPHLQVHATPER	4	NIGFSWIEVTILKPHLQVHATPER4	129676	183456	136313
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	NIGGQIQEK	NIGGQIQEK	2	NIGGQIQEK2	36982.7	38882	29769
Q6AYD4	Q6AYD4	ESAM_RAT	Esam	Endothelial cell-selective adhesion molecule	1	NIGHSIK	NIGHSIK	1	NIGHSIK1	7450.93		8338.45
Q6AYD4	Q6AYD4	ESAM_RAT	Esam	Endothelial cell-selective adhesion molecule	1	NIGHSIK	NIGHSIK	2	NIGHSIK2	11786.2		11787.5
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	NIGILFEEAEK	NIGILFEEAEK	2	NIGILFEEAEK2	87472.3	110765	84721.1
Q6DGG0	M0RB67;Q6DGG0	PPID_RAT	Ppid	Peptidyl-prolyl cis-trans isomerase D	0	NIGNTFFK	NIGNTFFK	2	NIGNTFFK2	18465.7	16754.2	
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	NIGTGVMQIETGPANHIFSCGADGTMK	NIGTGVMQIETGPANHIFSC(UniMod:4)GADGTMK	3	NIGTGVMQIETGPANHIFSC(UniMod:4)GADGTMK3	5835.78	3126.04	3734.5
Q3B7D2	Q3B7D2	SPTC2_RAT	Sptlc2	Serine palmitoyltransferase 2	1	NIGVVVVGFPATPIIESR	NIGVVVVGFPATPIIESR	2	NIGVVVVGFPATPIIESR2	7654.85	8069.24	6974.63
P85007	P85007	IR3IP_RAT	Ier3ip1	Immediate early response 3-interacting protein 1	1	NIGWGTDQGIGGFGEEPGIK	NIGWGTDQGIGGFGEEPGIK	3	NIGWGTDQGIGGFGEEPGIK3	14812.4	8104.78	13445.3
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	NIHDTSDLDAIAK	NIHDTSDLDAIAK	2	NIHDTSDLDAIAK2	25578.7	29875.3	11050.7
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	NIHDTSDLDAIAK	NIHDTSDLDAIAK	3	NIHDTSDLDAIAK3	54375.9	93503.5	82040.9
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	NIHIFVSR	NIHIFVSR	2	NIHIFVSR2	3174.43		3739.05
A2VD12	A2VD12	PBIP1_RAT	Pbxip1	Pre-B-cell leukemia transcription factor-interacting protein 1	1	NIHPQNLPSSPR	NIHPQNLPSSPR	3	NIHPQNLPSSPR3	25211.3	19102.8	24193.5
Q63450	Q63450	KCC1A_RAT	Camk1	Calcium/calmodulin-dependent protein kinase type 1	1	NIHQSVSEQIK	NIHQSVSEQIK	2	NIHQSVSEQIK2	1494.35		
Q63450	Q63450	KCC1A_RAT	Camk1	Calcium/calmodulin-dependent protein kinase type 1	1	NIHQSVSEQIK	NIHQSVSEQIK	3	NIHQSVSEQIK3	10953.9	10930.2	5619.09
Q63450	Q63450	KCC1A_RAT	Camk1	Calcium/calmodulin-dependent protein kinase type 1	1	NIHQSVSEQIKK	NIHQSVSEQIKK	3	NIHQSVSEQIKK3	2911.15	11854.3	
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	NIHYNMSSFNESVGLGYLK	NIHYNMSSFNESVGLGYLK	3	NIHYNMSSFNESVGLGYLK3			4789.73
Q63372	Q63372;Q07310	NRX1A_RAT	Nrxn1	Neurexin-1	0	NIIADPVTFK	NIIADPVTFK	2	NIIADPVTFK2	29611.4	28566.8	26120.6
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	NIIEELNR	NIIEELNR	2	NIIEELNR2	143243	143809	132494
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	NIIELVHQVSMGMK	NIIELVHQVSMGMK	2	NIIELVHQVSMGMK2		7243.39	11119.9
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	NIIELVHQVSMGMK	NIIELVHQVSMGMK	3	NIIELVHQVSMGMK3	57068.4	12655.1	24366.7
Q63468	Q63468	KPRA_RAT	Prpsap1	Phosphoribosyl pyrophosphate synthase-associated protein 1	1	NIIGVIPYFPYSK	NIIGVIPYFPYSK	2	NIIGVIPYFPYSK2	4832.83	10273.1	11769.8
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	NIIGYFEQK	NIIGYFEQK	2	NIIGYFEQK2	189591	193096	190964
P19804	Q05982;P19804	NDKB_RAT	Nme2	Nucleoside diphosphate kinase B	0	NIIHGSDSVESAEK	NIIHGSDSVESAEK	2	NIIHGSDSVESAEK2	25738.1	23530.2	11456
P19804	Q05982;P19804	NDKB_RAT	Nme2	Nucleoside diphosphate kinase B	0	NIIHGSDSVESAEK	NIIHGSDSVESAEK	3	NIIHGSDSVESAEK3	194505	161911	166604
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	NIIIALIDR	NIIIALIDR	2	NIIIALIDR2	27575.8	26352.5	21116.7
G3V6W5	G3V6W5	G3V6W5_RAT	Ifih1	RNA helicase	1	NIIICLPTGSGK	NIIIC(UniMod:4)LPTGSGK	2	NIIIC(UniMod:4)LPTGSGK2	37383.6	45305.7	36380.3
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	NIIIGPA	NIIIGPA	1	NIIIGPA1	11050.3	11462.8	15983.5
D3ZW34	D3ZW34	D3ZW34_RAT	Adamdec1	ADAM-like, decysin 1	1	NIIKPTCGNR	NIIKPTC(UniMod:4)GNR	3	NIIKPTC(UniMod:4)GNR3	18599.9	14591.8	13265.3
P45592	P45592;A0A8I6G734	COF1_RAT	Cfl1	Cofilin-1	0	NIILEEGK	NIILEEGK	1	NIILEEGK1	22825.3	18146.1	18513.1
P45592	P45592;A0A8I6G734	COF1_RAT	Cfl1	Cofilin-1	0	NIILEEGK	NIILEEGK	2	NIILEEGK2	1.57003e+06	1.51815e+06	1.6105e+06
P45592	P45592	COF1_RAT	Cfl1	Cofilin-1	1	NIILEEGKEILVGDVGQTVDDPYTTFVK	NIILEEGKEILVGDVGQTVDDPYTTFVK	4	NIILEEGKEILVGDVGQTVDDPYTTFVK4	22717.1	14250.7	20367.6
Q5U300	Q5U300;A0A8I5ZVX0;A0A8I6A544	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	0	NIILGGVK	NIILGGVK	2	NIILGGVK2	310999	261572	189558
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	NIIPYHVAEQLK	NIIPYHVAEQLK	2	NIIPYHVAEQLK2	2437.73	2098.19	3703.48
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	NIIPYHVAEQLK	NIIPYHVAEQLK	3	NIIPYHVAEQLK3	20196.3	27926.4	20189.8
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	NIIQGRPLPAELR	NIIQGRPLPAELR	3	NIIQGRPLPAELR3	46085.2	76465.3	57934.6
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	NIIQLSAQEPR	NIIQLSAQEPR	2	NIIQLSAQEPR2	21413.8	34865.9	18278.5
P49186	P49187;P49186	MK09_RAT	Mapk9	Mitogen-activated protein kinase 9	0	NIISLLNVFTPQK	NIISLLNVFTPQK	2	NIISLLNVFTPQK2	2572.62	2688.02	3422.95
Q4V884	Q4V884	Q4V884_RAT	Cdc16	CDC16 cell division cycle 16 homolog (S. cerevisiae)	1	NIISPPWDFRDFEVEK	NIISPPWDFRDFEVEK	3	NIISPPWDFRDFEVEK3	14776.1	17726.3	21112.7
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	NIIVLDSDK	NIIVLDSDK	2	NIIVLDSDK2	58705	68116.4	68943.5
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	NIIVMNVDSLSIHK	NIIVMNVDSLSIHK	3	NIIVMNVDSLSIHK3	2161.05	3060.87	6366.32
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	NIIVMNVDSLSIHKK	NIIVMNVDSLSIHKK	4	NIIVMNVDSLSIHKK4	4227.07	2287.04	464.069
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	NIIYDIK	NIIYDIK	2	NIIYDIK2	50691.1	56450.2	57140.5
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	NIKPPLDLK	NIKPPLDLK	2	NIKPPLDLK2	249356	243578	236468
D3ZRI9	D3ZRI9	D3ZRI9_RAT	Gan	Gigaxonin	1	NILAAASPYIR	NILAAASPYIR	2	NILAAASPYIR2	36457.6	34755.4	34055.6
D3ZVC4	D3ZVC4	D3ZVC4_RAT	Arel1	Apoptosis resistant E3 ubiquitin protein ligase 1	1	NILAATFIR	NILAATFIR	2	NILAATFIR2		25987.8	26470.4
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	NILALIELPSANTVGEEHPR	NILALIELPSANTVGEEHPR	3	NILALIELPSANTVGEEHPR3	21453.5	13891.1	10177.1
B2RYD7	B2RYD7	B2RYD7_RAT	Stt3b	dolichyl-diphosphooligosaccharide--protein glycotransferase	1	NILDDFR	NILDDFR	2	NILDDFR2	81251.1	65710.5	69744.4
P24155	P24155	THOP1_RAT	Thop1	Thimet oligopeptidase	1	NILDFPQHVSPNK	NILDFPQHVSPNK	2	NILDFPQHVSPNK2	2066.6	1008.82	782.001
P24155	P24155	THOP1_RAT	Thop1	Thimet oligopeptidase	1	NILDFPQHVSPNK	NILDFPQHVSPNK	3	NILDFPQHVSPNK3	6884.27	8913.88	6367.98
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	NILDNAVK	NILDNAVK	2	NILDNAVK2	82883.9	120464	98314.2
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	NILDNCPR	NILDNC(UniMod:4)PR	2	NILDNC(UniMod:4)PR2	8.04477e+06	8.81871e+06	1.00514e+07
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	NILDSKPAANK	NILDSKPAANK	2	NILDSKPAANK2	41699.6	34773	26953.9
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	NILDSKPAANK	NILDSKPAANK	3	NILDSKPAANK3	338395	329599	375088
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	NILDSKPAANKK	NILDSKPAANKK	2	NILDSKPAANKK2	18029	13318.1	3951.1
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	NILDSKPAANKK	NILDSKPAANKK	3	NILDSKPAANKK3	483090	517154	573018
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	NILEEYPSVSDIFK	NILEEYPSVSDIFK	2	NILEEYPSVSDIFK2	3390.74	5182.77	
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	NILEYLEWAK	NILEYLEWAK	2	NILEYLEWAK2	12991.8	7805.3	10620.2
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	NILEYLEWAKPFTSK	NILEYLEWAKPFTSK	3	NILEYLEWAKPFTSK3	31086.4	14199.5	26676.3
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	NILFGNMEEIYHFHNR	NILFGNMEEIYHFHNR	4	NILFGNMEEIYHFHNR4	4575.25	9345.29	9229.61
D3ZQQ1	D3ZQQ1	D3ZQQ1_RAT	Aftph	Aftiphilin	1	NILFTGNK	NILFTGNK	2	NILFTGNK2	23453	16751.2	16937.3
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	NILFVIDVSGSMWGIK	NILFVIDVSGSMWGIK	2	NILFVIDVSGSMWGIK2	1.11346e+06	261736	103544
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	NILFVIDVSGSMWGIK	NILFVIDVSGSMWGIK	3	NILFVIDVSGSMWGIK3	11933.1	119536	128385
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	NILFVIDVSGSMWGIKMKQTVEAMK	NILFVIDVSGSMWGIKMKQTVEAMK	4	NILFVIDVSGSMWGIKMKQTVEAMK4	25129.9	23581.8	21172.8
M0R9L0	M0R9L0	M0R9L0_RAT	Naca	Nascent polypeptide associated complex subunit alpha	1	NILFVITKPDVYK	NILFVITKPDVYK	2	NILFVITKPDVYK2	29930.2	20455.3	24189.9
M0R9L0	M0R9L0	M0R9L0_RAT	Naca	Nascent polypeptide associated complex subunit alpha	1	NILFVITKPDVYK	NILFVITKPDVYK	3	NILFVITKPDVYK3	106432	102640	94246
P56574	P56574;P41562	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	0	NILGGTVFR	NILGGTVFR	2	NILGGTVFR2	386681	316608	330381
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	NILGGTVFREPIICK	NILGGTVFREPIIC(UniMod:4)K	2	NILGGTVFREPIIC(UniMod:4)K2	4478.1	5037.14	6410.39
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	NILGGTVFREPIICK	NILGGTVFREPIIC(UniMod:4)K	3	NILGGTVFREPIIC(UniMod:4)K3	233312	263356	281507
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	NILHSFVQLR	NILHSFVQLR	3	NILHSFVQLR3	26313.8	26674.2	24204.7
P05708	P27881;P05708	HXK1_RAT	Hk1	Hexokinase-1	0	NILIDFTK	NILIDFTK	1	NILIDFTK1	4505.62	3147.54	
P05708	P27881;P05708	HXK1_RAT	Hk1	Hexokinase-1	0	NILIDFTK	NILIDFTK	2	NILIDFTK2	327032	293301	289674
Q66H50	Q66H50	FACR1_RAT	Far1	Fatty acyl-CoA reductase 1	1	NILLTGATGFLGK	NILLTGATGFLGK	2	NILLTGATGFLGK2	9877.43	13800.8	14213.6
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	NILLTIGSYK	NILLTIGSYK	2	NILLTIGSYK2	38293.7	36153.3	47403.3
Q63965	Q63965	SFXN1_RAT	Sfxn1	Sideroflexin-1	1	NILLTNEQLENAR	NILLTNEQLENAR	2	NILLTNEQLENAR2	189199	166065	184451
Q63965	Q63965	SFXN1_RAT	Sfxn1	Sideroflexin-1	1	NILLTNEQLENAR	NILLTNEQLENAR	3	NILLTNEQLENAR3	48438.4	39753.9	46721.3
Q63965	Q63965	SFXN1_RAT	Sfxn1	Sideroflexin-1	1	NILLTNEQLENARK	NILLTNEQLENARK	3	NILLTNEQLENARK3	24737.8	37244.4	42355.8
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	NILMQLYEPNPK	NILMQLYEPNPK	2	NILMQLYEPNPK2	381114	405583	415727
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	NILMQLYEPNPK	NILMQLYEPNPK	3	NILMQLYEPNPK3	40420.9	77950.3	53156.4
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	NILPFDHSR	NILPFDHSR	2	NILPFDHSR2	23472.9	25322.9	22778.6
O70196	O70196	PPCE_RAT	Prep	Prolyl endopeptidase	1	NILQLHDLTTGALLK	NILQLHDLTTGALLK	3	NILQLHDLTTGALLK3	9848.42	8719.06	
Q5QE80	Q5QE80	AOXC_RAT	Aox3	Aldehyde oxidase 3	1	NILSDVVSR	NILSDVVSR	2	NILSDVVSR2	3469.93	8247.73	8461.74
Q08850	Q08850	STX4_RAT	Stx4	Syntaxin-4	1	NILSSADYVER	NILSSADYVER	2	NILSSADYVER2	143432	121469	145232
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	NILSTQLR	NILSTQLR	2	NILSTQLR2	67370.7	38155.1	62275.2
O35509	O35509	RB11B_RAT	Rab11b	Ras-related protein Rab-11B	1	NILTEIYR	NILTEIYR	2	NILTEIYR2	671096	608147	772715
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	NILTSSTGSR	NILTSSTGSR	2	NILTSSTGSR2	23008.5	28909.4	21955.6
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	NILVASPECVK	NILVASPEC(UniMod:4)VK	2	NILVASPEC(UniMod:4)VK2	118240	95966.1	112147
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	NILVENENR	NILVENENR	2	NILVENENR2	94332.7	120652	91338.3
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	NILVFGEDGSGK	NILVFGEDGSGK	2	NILVFGEDGSGK2	72908.2	64901	93112.6
D3ZCD0	D3ZCD0	D3ZCD0_RAT	Tek	receptor protein-tyrosine kinase	1	NILVGENYIAK	NILVGENYIAK	2	NILVGENYIAK2	15865	17046.2	25395.7
P41243	P41243	MATK_RAT	Matk	Megakaryocyte-associated tyrosine-protein kinase	1	NILVSEDLVAK	NILVSEDLVAK	2	NILVSEDLVAK2	19845.8	27562.3	20424.9
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	NIMAACDPR	NIMAAC(UniMod:4)DPR	2	NIMAAC(UniMod:4)DPR2	1.20596e+07	1.34686e+07	1.43914e+07
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	NIMAACDPRR	NIMAAC(UniMod:4)DPRR	3	NIMAAC(UniMod:4)DPRR3	38264.2	48292.6	62026.7
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	NIMEYLR	NIMEYLR	1	NIMEYLR1	116801	101908	113881
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	NIMEYLR	NIMEYLR	2	NIMEYLR2	6.11496e+07	5.75092e+07	6.12403e+07
Q5BQE6	Q5BQE6	DHC24_RAT	Dhcr24	Delta(24)-sterol reductase	1	NIMINLMDILEVDTKK	NIMINLMDILEVDTKK	3	NIMINLMDILEVDTKK3		5155.34	
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	NIMPICLPR	NIMPIC(UniMod:4)LPR	2	NIMPIC(UniMod:4)LPR2	1.90756e+06	1.99081e+06	2.03506e+06
Q9WUF4	Q9WUF4	VAMP8_RAT	Vamp8	Vesicle-associated membrane protein 8	1	NIMTQNVER	NIMTQNVER	2	NIMTQNVER2	520253	468375	513855
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	NIMVQQK	NIMVQQK	2	NIMVQQK2	25109.6	31876.1	30298.9
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	NINADEAAAMGAVYQAAALSK	NINADEAAAMGAVYQAAALSK	3	NINADEAAAMGAVYQAAALSK3	219854	240887	237945
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	NINALLIIGGFEAYLGLLELAAAR	NINALLIIGGFEAYLGLLELAAAR	3	NINALLIIGGFEAYLGLLELAAAR3	1551.12		
P61972	P61972;A0A8I6ABF4	NTF2_RAT	Nutf2	Nuclear transport factor 2	0	NINDAWVCTNDMFR	NINDAWVC(UniMod:4)TNDMFR	2	NINDAWVC(UniMod:4)TNDMFR2	2405.02	6734.48	
Q6P6Q9	Q6P6Q9	MICU1_RAT	Micu1	Calcium uptake protein 1, mitochondrial	1	NINDVDTALSFYHMAGASLDK	NINDVDTALSFYHMAGASLDK	3	NINDVDTALSFYHMAGASLDK3	36419.2	37718.4	48629.3
Q63481	Q63481	RAB7L_RAT	Rab29	Ras-related protein Rab-7L1	1	NINEAMR	NINEAMR	2	NINEAMR2	51937.1	40298.9	52892.7
A0A8I6AKR4	A0A8I6AKR4;A0A8I6GKU5	A0A8I6AKR4_RAT	Ap3s1	Adaptor related protein complex 3 subunit sigma 1	0	NINIGDISIK	NINIGDISIK	2	NINIGDISIK2	124643	164705	241833
P62944	P52303;P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	NINLIVQK	NINLIVQK	1	NINLIVQK1	3490.93	2352.82	4467.62
P62944	P52303;P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	NINLIVQK	NINLIVQK	2	NINLIVQK2	282773	277432	224695
Q5M8C6	Q5M8C6	FGL1_RAT	Fgl1	Fibrinogen-like protein 1	1	NINLLTMQGDYTLK	NINLLTMQGDYTLK	2	NINLLTMQGDYTLK2	17625.3	10321.2	10157
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	NINNYFSFSK	NINNYFSFSK	2	NINNYFSFSK2	161525	171735	149521
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	NINNYFSFSKDPTMGNPK	NINNYFSFSKDPTMGNPK	3	NINNYFSFSKDPTMGNPK3	18163.2	40054.5	39639.7
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	NIPAGLQSMNQALQR	NIPAGLQSMNQALQR	2	NIPAGLQSMNQALQR2	48846.1	59689.5	53951.9
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	NIPCAVTK	NIPC(UniMod:4)AVTK	2	NIPC(UniMod:4)AVTK2	243323	308669	269210
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	NIPDDPCR	NIPDDPC(UniMod:4)R	2	NIPDDPC(UniMod:4)R2	71711.8	67158.2	64682.2
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	NIPEDAADMAR	NIPEDAADMAR	2	NIPEDAADMAR2	91710.6	83231.2	84547.2
Q3T1J9	Q3T1J9;A0A8I6AAQ1;A0A8I5ZK61	MOB1A_RAT	Mob1a	MOB kinase activator 1A	0	NIPEGSHQYELLK	NIPEGSHQYELLK	3	NIPEGSHQYELLK3	72648.8	56777.1	60540.4
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	NIPGDFECECPNGYR	NIPGDFEC(UniMod:4)EC(UniMod:4)PNGYR	2	NIPGDFEC(UniMod:4)EC(UniMod:4)PNGYR2	1.77312e+06	1.59889e+06	1.88303e+06
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	NIPGDFECECPNGYR	NIPGDFEC(UniMod:4)EC(UniMod:4)PNGYR	3	NIPGDFEC(UniMod:4)EC(UniMod:4)PNGYR3	93818.3	132044	125142
P50878	A0A8I6ASF5;P50878	RL4_RAT	Rpl4	Large ribosomal subunit protein uL4	0	NIPGITLLNVSK	NIPGITLLNVSK	2	NIPGITLLNVSK2	89573.9	80546.8	65670.4
A0A0G2JSI4	A0A0G2JSI4	A0A0G2JSI4_RAT	Adgre5	Adhesion G protein-coupled receptor E5	1	NIPGSYK	NIPGSYK	1	NIPGSYK1	16711.5	25025.7	
Q923S8	Q923S8	PANK4_RAT	Pank4	4'-phosphopantetheine phosphatase	1	NIPHEAFMYQK	NIPHEAFMYQK	3	NIPHEAFMYQK3	7830.79	8999.38	2649.33
D4AE71	D4AE71	D4AE71_RAT	Cspg4b	Chondroitin sulfate proteoglycan 4B	1	NIPLEISNINR	NIPLEISNINR	2	NIPLEISNINR2			2097.06
Q5XIT9	Q5XIT9	MCCB_RAT	Mccc2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	1	NIPLLFLQNITGFMVGK	NIPLLFLQNITGFMVGK	2	NIPLLFLQNITGFMVGK2	6009.17		
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	NIPLNEFR	NIPLNEFR	2	NIPLNEFR2	21773.9	24594.1	23215.9
Q05701	Q05701	BPIB3_RAT	Bpifb3	BPI fold-containing family B member 3	1	NIPLTTTDLAALAPEALGK	NIPLTTTDLAALAPEALGK	2	NIPLTTTDLAALAPEALGK2	6699.22	5888.48	5104.93
D4A7U6	D4A7U6	D4A7U6_RAT	Lsm3	U6 snRNA-associated Sm-like protein LSm3	1	NIPMLFVR	NIPMLFVR	2	NIPMLFVR2	38454.2	37385.9	35960.7
Q5XIP0	Q5XIP0	Q5XIP0_RAT	Dnajb4	DnaJ heat shock protein family (Hsp40) member B4	1	NIPMSVTDIVKPGMR	NIPMSVTDIVKPGMR	3	NIPMSVTDIVKPGMR3	14955.6	14746.3	14837.1
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	NIPNGLQEFLDPLCQR	NIPNGLQEFLDPLC(UniMod:4)QR	2	NIPNGLQEFLDPLC(UniMod:4)QR2	14856.4	15077.5	10114.9
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	NIPNGLQEFLDPLCQR	NIPNGLQEFLDPLC(UniMod:4)QR	3	NIPNGLQEFLDPLC(UniMod:4)QR3	17475.4	11875.9	22454
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	NIPSYVK	NIPSYVK	2	NIPSYVK2	77337.9	102673	69204.2
P08934	P08932;A0A0G2KA54;P08934	KNG1_RAT	Kng1	Kininogen-1	0	NIPVDSPELK	NIPVDSPELK	2	NIPVDSPELK2	3.4128e+07	3.00984e+07	3.02105e+07
Q4V8C7	Q4V8C7	PRKRA_RAT	Prkra	Interferon-inducible double-stranded RNA-dependent protein kinase activator A	1	NIPVYECER	NIPVYEC(UniMod:4)ER	2	NIPVYEC(UniMod:4)ER2	16991.6	12006.8	13634
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	NIQDSVPK	NIQDSVPK	2	NIQDSVPK2	63477.2	51267.2	64241.4
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	NIQEICMSQTGWNR	NIQEIC(UniMod:4)MSQTGWNR	2	NIQEIC(UniMod:4)MSQTGWNR2	57347.2	42872.2	67047.8
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	NIQEICMSQTGWNR	NIQEIC(UniMod:4)MSQTGWNR	3	NIQEIC(UniMod:4)MSQTGWNR3	22806.7	23032.9	20551.3
Q9Z272	Q66H91;Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	0	NIQELLR	NIQELLR	2	NIQELLR2	41533.8	44192	34817.1
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	NIQELNVVGK	NIQELNVVGK	2	NIQELNVVGK2	14402.2	16319.1	16344.9
A0A0G2JZH0	A0A0G2JZH0	A0A0G2JZH0_RAT	Cab39	Calcium binding protein 39	1	NIQFEAFHVFK	NIQFEAFHVFK	2	NIQFEAFHVFK2	5002.85	5499.09	4227.64
A0A0G2JZH0	A0A0G2JZH0	A0A0G2JZH0_RAT	Cab39	Calcium binding protein 39	1	NIQFEAFHVFK	NIQFEAFHVFK	3	NIQFEAFHVFK3	6381.98	6040.08	7848.22
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	NIQLLPGTHGLQILNAQK	NIQLLPGTHGLQILNAQK	2	NIQLLPGTHGLQILNAQK2	12375.1	12616.3	18786
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	NIQLLPGTHGLQILNAQK	NIQLLPGTHGLQILNAQK	3	NIQLLPGTHGLQILNAQK3	75541.7	90832	72756.5
Q8R492	Q8R492	Q8R492_RAT	Fap	Fibroblast activation protein, alpha	1	NIQLPAVEIK	NIQLPAVEIK	2	NIQLPAVEIK2	16222.4	12569.1	13629.7
D3Z8W5	D3Z8W5	D3Z8W5_RAT	Ube2l3	Ube2l3 protein	1	NIQVDEANLLTWQGLIVPDNPPYDK	NIQVDEANLLTWQGLIVPDNPPYDK	3	NIQVDEANLLTWQGLIVPDNPPYDK3	12947.5	6922.6	8366.28
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	NIQVDSPYDISR	NIQVDSPYDISR	2	NIQVDSPYDISR2	232871	169037	235693
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	NIQVSHQEFSK	NIQVSHQEFSK	2	NIQVSHQEFSK2	14989.4	8585.12	9161.21
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	NIQVSHQEFSK	NIQVSHQEFSK	3	NIQVSHQEFSK3	25938.7	32623.1	10972.4
F1LQP9	F1LQP9;D3ZER6	F1LQP9_RAT	Tnpo1	Transportin 1	0	NIRDNEEKDSAFR	NIRDNEEKDSAFR	3	NIRDNEEKDSAFR3	3830.85	4101.97	7353.68
F1LQP9	F1LQP9;D3ZER6	F1LQP9_RAT	Tnpo1	Transportin 1	0	NIRDNEEKDSAFR	NIRDNEEKDSAFR	4	NIRDNEEKDSAFR4	2930.51	12028.6	5863.58
B0BNC9	B0BNC9	QORL2_RAT		Quinone oxidoreductase-like protein 2	1	NISAMGLYWGR	NISAMGLYWGR	2	NISAMGLYWGR2	5237.65		3791.37
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	NISEGFSGIPDNVDAALALPAHSYSGR	NISEGFSGIPDNVDAALALPAHSYSGR	3	NISEGFSGIPDNVDAALALPAHSYSGR3	42964.8	37620.4	45812.7
Q7TSA0	Q7TSA0	MIRO2_RAT	Rhot2	Mitochondrial Rho GTPase 2	1	NISELFYYAQK	NISELFYYAQK	2	NISELFYYAQK2	17016.9	28777.2	20038.8
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	NISFMVK	NISFMVK	2	NISFMVK2	74759.2	86262.1	82092
O35763	O35763;P31977;Q5PQK5	MOES_RAT	Msn	Moesin	0	NISFNDK	NISFNDK	1	NISFNDK1	16007.1	12936	12629
O35763	O35763;P31977;Q5PQK5	MOES_RAT	Msn	Moesin	0	NISFNDKK	NISFNDKK	2	NISFNDKK2	44241	37386.2	29351.8
P84079	P61206;P84082;P84079	ARF1_RAT	Arf1	ADP-ribosylation factor 1	0	NISFTVWDVGGQDK	NISFTVWDVGGQDK	2	NISFTVWDVGGQDK2	321055	275099	294338
P84079	P61206;P84082;P84079	ARF1_RAT	Arf1	ADP-ribosylation factor 1	0	NISFTVWDVGGQDK	NISFTVWDVGGQDK	3	NISFTVWDVGGQDK3	3196.54		5098.21
P12368	P12368	KAP2_RAT	Prkar2a	cAMP-dependent protein kinase type II-alpha regulatory subunit	1	NISHYEEQLVK	NISHYEEQLVK	3	NISHYEEQLVK3	15036.8	11378.9	3633.6
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	NITDFAEQYSTQK	NITDFAEQYSTQK	2	NITDFAEQYSTQK2	483335	576024	537140
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	NITDFAEQYSTQK	NITDFAEQYSTQK	3	NITDFAEQYSTQK3	20062.3	34624.4	28882.9
P18395	P18395	CSDE1_RAT	Csde1	Cold shock domain-containing protein E1	1	NITLDDASAPR	NITLDDASAPR	2	NITLDDASAPR2	21684.2	16964.4	20302.7
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	NITLLHYLITIVENK	NITLLHYLITIVENK	3	NITLLHYLITIVENK3	3830.35		
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	NITLLHYLITIVENKYPK	NITLLHYLITIVENKYPK	3	NITLLHYLITIVENKYPK3	7819.94	12111.4	7207.17
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	NITLLHYLITIVENKYPK	NITLLHYLITIVENKYPK	4	NITLLHYLITIVENKYPK4	1705.49	2363.06	1923.08
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	NITLSLVANPSHLEAADPVVMGK	NITLSLVANPSHLEAADPVVMGK	3	NITLSLVANPSHLEAADPVVMGK3	72514.7	78982.9	59964.8
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	NITVIFHPLLR	NITVIFHPLLR	2	NITVIFHPLLR2	7226.24	7780.99	2493.85
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	NITVIFHPLLR	NITVIFHPLLR	3	NITVIFHPLLR3	18170	17276.5	16384.6
P67779	P67779	PHB1_RAT	Phb1	Prohibitin 1	1	NITYLPAGQSVLLQLPQ	NITYLPAGQSVLLQLPQ	2	NITYLPAGQSVLLQLPQ2	9342.41	14644.3	23843.1
P67779	P67779	PHB1_RAT	Phb1	Prohibitin 1	1	NITYLPAGQSVLLQLPQ	NITYLPAGQSVLLQLPQ	3	NITYLPAGQSVLLQLPQ3	8951.95	4286.5	
Q6AYQ8	Q6AYQ8	FAHD1_RAT	Fahd1	Acylpyruvase FAHD1, mitochondrial	1	NIVCVGR	NIVC(UniMod:4)VGR	2	NIVC(UniMod:4)VGR2	58121.4	56881.8	65642.6
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	NIVDHTNEQQK	NIVDHTNEQQK	2	NIVDHTNEQQK2	11753		7420.4
P62856	D3Z8D7;P62856;A0A0G2JY64;A0A0G2JVP7;A0A0G2K743	RS26_RAT	Rps26	Small ribosomal subunit protein eS26	0	NIVEAAAVR	NIVEAAAVR	2	NIVEAAAVR2	78613.5	71351.9	76177.4
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	NIVEEIEDLVAR	NIVEEIEDLVAR	2	NIVEEIEDLVAR2	2741.86	5170.85	2451.91
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	NIVFGLSTESVHSEGVHK	NIVFGLSTESVHSEGVHK	3	NIVFGLSTESVHSEGVHK3	64020.3	53858.2	59943.8
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	NIVFGLSTESVHSEGVHK	NIVFGLSTESVHSEGVHK	4	NIVFGLSTESVHSEGVHK4	13526.9	15228.5	17556.4
A0A8I6GLY6	A0A8I6GLY6	A0A8I6GLY6_RAT	Gga1	Golgi associated, gamma adaptin ear containing, ARF binding protein 1	1	NIVFQSAVPK	NIVFQSAVPK	2	NIVFQSAVPK2	8392.13	7946.38	8578.24
Q9EQG6	Q9EQG6	KDIS_RAT	Kidins220	Kinase D-interacting substrate of 220 kDa	1	NIVHLPVFLNSR	NIVHLPVFLNSR	3	NIVHLPVFLNSR3	1382.85	3838.36	6283.55
A0A8I5ZXB9	A0A8I5ZXB9	A0A8I5ZXB9_RAT	Kifap3	Kinesin-associated protein 3	1	NIVHMLVK	NIVHMLVK	2	NIVHMLVK2	6969.64	10307.5	9747.99
O88339	Q4V882;O88339	EPN1_RAT	Epn1	Epsin-1	0	NIVHNYSEAEIK	NIVHNYSEAEIK	2	NIVHNYSEAEIK2	5276.02	11330.2	10162.5
O88339	Q4V882;O88339	EPN1_RAT	Epn1	Epsin-1	0	NIVHNYSEAEIK	NIVHNYSEAEIK	3	NIVHNYSEAEIK3	21734.9	20009.6	36157.7
P07633	P07633	PCCB_RAT	Pccb	Propionyl-CoA carboxylase beta chain, mitochondrial	1	NIVIGFAR	NIVIGFAR	2	NIVIGFAR2	35538.7	39389.5	42028.8
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	NIVKDQFK	NIVKDQFK	2	NIVKDQFK2	116856	140329	157879
E9PTK4	E9PTK4	E9PTK4_RAT	Thnsl1	Threonine synthase-like 1	1	NIVLMGPPGAGK	NIVLMGPPGAGK	2	NIVLMGPPGAGK2	5450.74	7986.25	6349.94
Q4V7C7	A0A8I6GL35;Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	0	NIVLSGGSTMFR	NIVLSGGSTMFR	2	NIVLSGGSTMFR2	689112	643023	724726
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	NIVVTILDDGIER	NIVVTILDDGIER	2	NIVVTILDDGIER2	150137	154525	171192
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	NIVVTILDDGIER	NIVVTILDDGIER	3	NIVVTILDDGIER3	7248.68	8975.4	7258.92
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	NIVVVEGVR	NIVVVEGVR	2	NIVVVEGVR2	328225	314390	331597
F7FFW7	F7FFW7	F7FFW7_RAT	Atp6v0d1	ATPase H+ transporting V0 subunit D1	1	NIVWIAECIAQR	NIVWIAEC(UniMod:4)IAQR	2	NIVWIAEC(UniMod:4)IAQR2	46693.5	38668.7	37928.2
F7FFW7	F7FFW7	F7FFW7_RAT	Atp6v0d1	ATPase H+ transporting V0 subunit D1	1	NIVWIAECIAQR	NIVWIAEC(UniMod:4)IAQR	3	NIVWIAEC(UniMod:4)IAQR3	25164.7	20153.6	20634.3
Q9Z1K9	Q9Z1K9	ADA17_RAT	Adam17	Disintegrin and metalloproteinase domain-containing protein 17	1	NIYLNSGLTSTK	NIYLNSGLTSTK	2	NIYLNSGLTSTK2	8869.86	9036.07	2190.8
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	NIYQFDFK	NIYQFDFK	2	NIYQFDFK2	107511	128340	128088
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	NIYSEELR	NIYSEELR	2	NIYSEELR2	37241.4	44543.5	40004.4
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	NIYYLCAPNR	NIYYLC(UniMod:4)APNR	2	NIYYLC(UniMod:4)APNR2	29599.1	27953.1	33049.9
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	NKADKPLSIHPQGIR	NKADKPLSIHPQGIR	4	NKADKPLSIHPQGIR4	5063.77	16618.9	12224.5
A0A8I6A7R6	A0A8I6A7R6	A0A8I6A7R6_RAT	ENSRNOG00000065040	Ig-like domain-containing protein	1	NKANDYSTVYSASVK	NKANDYSTVYSASVK	3	NKANDYSTVYSASVK3	11230	6769.86	7452.46
A0A8I6A7R6	A0A8I6A7R6	A0A8I6A7R6_RAT	ENSRNOG00000065040	Ig-like domain-containing protein	1	NKANDYSTVYSASVKDR	NKANDYSTVYSASVKDR	3	NKANDYSTVYSASVKDR3	1254.36	2635.01	4050.16
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	NKAPGEYR	NKAPGEYR	2	NKAPGEYR2			9002.3
P40241	P40241	CD9_RAT	Cd9	CD9 antigen	1	NKDEPQR	NKDEPQR	2	NKDEPQR2		3939	45113.2
P40241	P40241	CD9_RAT	Cd9	CD9 antigen	1	NKDEPQRETLK	NKDEPQRETLK	2	NKDEPQRETLK2			15728.2
P40241	P40241	CD9_RAT	Cd9	CD9 antigen	1	NKDEPQRETLK	NKDEPQRETLK	3	NKDEPQRETLK3			87618.4
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	NKDIVTVANAVFVR	NKDIVTVANAVFVR	2	NKDIVTVANAVFVR2	3791.59	4793.24	2213.23
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	NKDIVTVANAVFVR	NKDIVTVANAVFVR	3	NKDIVTVANAVFVR3	28230.7	24519.5	25575.4
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	NKDKEFIPQAFGMPLSQVIANDR	NKDKEFIPQAFGMPLSQVIANDR	3	NKDKEFIPQAFGMPLSQVIANDR3	11200.3	6647.01	9909.63
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	NKDKEFIPQAFGMPLSQVIANDR	NKDKEFIPQAFGMPLSQVIANDR	4	NKDKEFIPQAFGMPLSQVIANDR4	41390.1	51555	58664.5
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	NKDQEGIVVLK	NKDQEGIVVLK	3	NKDQEGIVVLK3	12746.8	17115.6	18314
Q64119	Q64119	MYL6_RAT	Myl6	Myosin light polypeptide 6	1	NKDQGTYEDYVEGLR	NKDQGTYEDYVEGLR	2	NKDQGTYEDYVEGLR2	16096.1	9799.71	13058.6
Q64119	Q64119	MYL6_RAT	Myl6	Myosin light polypeptide 6	1	NKDQGTYEDYVEGLR	NKDQGTYEDYVEGLR	3	NKDQGTYEDYVEGLR3	416182	476999	556704
A0A8I5ZS69	A0A8I5ZS69	A0A8I5ZS69_RAT	Snx6	Sorting nexin	1	NKDVLQAETSQQLCCQK	NKDVLQAETSQQLC(UniMod:4)C(UniMod:4)QK	3	NKDVLQAETSQQLC(UniMod:4)C(UniMod:4)QK3	5580.02	3662.24	7797.88
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	NKEDMVQATSETR	NKEDMVQATSETR	2	NKEDMVQATSETR2	6841.55	10693.4	10693.7
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	NKEDMVQATSETR	NKEDMVQATSETR	3	NKEDMVQATSETR3	77797	100990	102103
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	NKEDQYEHLDAADMTK	NKEDQYEHLDAADMTK	3	NKEDQYEHLDAADMTK3	60645	58841.8	55738.5
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	NKEDQYEHLDAADMTK	NKEDQYEHLDAADMTK	4	NKEDQYEHLDAADMTK4	19701.6	32307.6	33705.6
D3ZF97	D3ZF97	D3ZF97_RAT	Erlec1	Endoplasmic reticulum lectin	1	NKEEDLSSAK	NKEEDLSSAK	2	NKEEDLSSAK2			6458.56
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	NKEFVSAVAQVK	NKEFVSAVAQVK	2	NKEFVSAVAQVK2		2659.33	
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	NKEFVSAVAQVK	NKEFVSAVAQVK	3	NKEFVSAVAQVK3	9756.66	11025	21670.1
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	NKEIFLR	NKEIFLR	2	NKEIFLR2	307423	313273	302973
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	NKEMLDILVK	NKEMLDILVK	3	NKEMLDILVK3	4218.25	2903.13	7528.91
G3V965	G3V965	G3V965_RAT	Agpat5	1-acylglycerol-3-phosphate O-acyltransferase 5	1	NKENVIYLANHQSTVDWIVADMLAAR	NKENVIYLANHQSTVDWIVADMLAAR	4	NKENVIYLANHQSTVDWIVADMLAAR4	11176.4	24625.8	33277.9
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	NKEQLSDMMMINK	NKEQLSDMMMINK	3	NKEQLSDMMMINK3	3390.93	2690.81	4688.05
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	NKESVVFVQTDK	NKESVVFVQTDK	2	NKESVVFVQTDK2	143591	189852	116640
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	NKESVVFVQTDK	NKESVVFVQTDK	3	NKESVVFVQTDK3	887417	754110	865474
P14046	Q6IE52;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	NKESVVFVQTDKPMYK	NKESVVFVQTDKPMYK	2	NKESVVFVQTDKPMYK2	585505	575212	697565
P14046	Q6IE52;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	NKESVVFVQTDKPMYK	NKESVVFVQTDKPMYK	3	NKESVVFVQTDKPMYK3	4.16775e+06	6617.57	6201.68
P14046	Q6IE52;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	NKESVVFVQTDKPMYK	NKESVVFVQTDKPMYK	4	NKESVVFVQTDKPMYK4	54161.6	45369.2	47393.5
Q03626	A0A8I6AG69;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	NKESVVFVQTDKPVYK	NKESVVFVQTDKPVYK	2	NKESVVFVQTDKPVYK2	1628.03	2422.56	2149
Q03626	A0A8I6AG69;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	NKESVVFVQTDKPVYK	NKESVVFVQTDKPVYK	3	NKESVVFVQTDKPVYK3	70306.8	53674.4	45911.9
Q03626	A0A8I6AG69;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	NKESVVFVQTDKPVYK	NKESVVFVQTDKPVYK	4	NKESVVFVQTDKPVYK4	101466	106793	86241.7
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	NKETCDVIINTLGK	NKETC(UniMod:4)DVIINTLGK	2	NKETC(UniMod:4)DVIINTLGK2	6255.51	3840.3	4820.06
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	NKETCDVIINTLGK	NKETC(UniMod:4)DVIINTLGK	3	NKETC(UniMod:4)DVIINTLGK3	58537.3	65151.3	57653.9
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	NKETGALAAAK	NKETGALAAAK	2	NKETGALAAAK2	10231.4	11859.9	16834.2
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	NKETLIIEPEK	NKETLIIEPEK	2	NKETLIIEPEK2	16404.1	14618.9	19509.9
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	NKETLIIEPEK	NKETLIIEPEK	3	NKETLIIEPEK3	75715.4	84408.4	74085.1
A0A8I6GJC5	A0A8I6GJC5	A0A8I6GJC5_RAT	Reps1	RALBP1 associated Eps domain containing 1	1	NKETNTVLAR	NKETNTVLAR	2	NKETNTVLAR2	6531.3	4233.6	
A0A8I6GJC5	A0A8I6GJC5	A0A8I6GJC5_RAT	Reps1	RALBP1 associated Eps domain containing 1	1	NKETNTVLAR	NKETNTVLAR	3	NKETNTVLAR3	14037.6	16939.5	19857.3
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	NKEVYSWGCGEYGR	NKEVYSWGC(UniMod:4)GEYGR	3	NKEVYSWGC(UniMod:4)GEYGR3	4241.28	7552.06	10175.7
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	NKFLFLK	NKFLFLK	2	NKFLFLK2	25434.1	51063.7	33742.4
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	NKGKYEMYLK	NKGKYEMYLK	3	NKGKYEMYLK3	16965.3	6392.58	8029.26
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	NKHEAMITDLEER	NKHEAMITDLEER	3	NKHEAMITDLEER3	2935.4	1867.04	
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	NKHPANVILDTGK	NKHPANVILDTGK	2	NKHPANVILDTGK2	3175.67	2493.19	4673.93
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	NKHPANVILDTGK	NKHPANVILDTGK	3	NKHPANVILDTGK3	26158	36059.5	31742.1
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	NKHPANVILDTGKK	NKHPANVILDTGKK	3	NKHPANVILDTGKK3	2797.73	3427.25	2844.18
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	NKHPANVILDTGKK	NKHPANVILDTGKK	4	NKHPANVILDTGKK4	29772.4	36614.9	37490.9
Q4KLH3	Q4KLH3	OGRL1_RAT	Ogfrl1	Opioid growth factor receptor-like protein 1	1	NKIPFKPDGVYIEEVLNK	NKIPFKPDGVYIEEVLNK	3	NKIPFKPDGVYIEEVLNK3	21458.9	28962.5	26354
Q4KLH3	Q4KLH3	OGRL1_RAT	Ogfrl1	Opioid growth factor receptor-like protein 1	1	NKIPFKPDGVYIEEVLNK	NKIPFKPDGVYIEEVLNK	4	NKIPFKPDGVYIEEVLNK4	17144.2	25473.8	20195.4
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	NKLPGLITSMETIGAK	NKLPGLITSMETIGAK	3	NKLPGLITSMETIGAK3	21018	13893.1	15510.2
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	NKPEDYQGGR	NKPEDYQGGR	2	NKPEDYQGGR2			749056
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	NKPEDYQGGR	NKPEDYQGGR	3	NKPEDYQGGR3			412143
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	NKPGVYTDVANYLDWIQEHTAF	NKPGVYTDVANYLDWIQEHTAF	3	NKPGVYTDVANYLDWIQEHTAF3	10929	18100.1	13401.9
F7FMG3	F7FMG3	F7FMG3_RAT	Tmprss13	Transmembrane serine protease 13	1	NKPGVYTK	NKPGVYTK	2	NKPGVYTK2			62709.6
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	NKPHTPFR	NKPHTPFR	2	NKPHTPFR2	152149	181522	158185
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	NKPICHTIK	NKPIC(UniMod:4)HTIK	2	NKPIC(UniMod:4)HTIK2			1.16493e+06
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	NKPILHTDLDVK	NKPILHTDLDVK	3	NKPILHTDLDVK3	14456.9	10963.2	12858.1
P11505	Q64542;P11505;P11506	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	0	NKPLISR	NKPLISR	2	NKPLISR2		20586.6	
O88775	O88775	EMB_RAT	Emb	Embigin	1	NKPLITYVGDSTVLK	NKPLITYVGDSTVLK	3	NKPLITYVGDSTVLK3	29645.1	30082	44308.8
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	NKPSVLEDSSFER	NKPSVLEDSSFER	3	NKPSVLEDSSFER3	13823.3	10202.6	11452.7
Q62902	Q62902	LMAN1_RAT	Lman1	Protein ERGIC-53	1	NKPYPVR	NKPYPVR	2	NKPYPVR2	216274	191865	208317
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	NKPYVSWPSSGGSEPGVPVPLR	NKPYVSWPSSGGSEPGVPVPLR	3	NKPYVSWPSSGGSEPGVPVPLR3	140220	172016	164196
B5DEP5	B5DEP5	B5DEP5_RAT	Trip4	Thyroid hormone receptor interactor 4	1	NKQEVPAFPEPDVTVEVK	NKQEVPAFPEPDVTVEVK	3	NKQEVPAFPEPDVTVEVK3	3622.13	2428.52	2521.79
P14046	Q6IE52;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	NKVHLSFSPSQSLPASQTHMR	NKVHLSFSPSQSLPASQTHMR	3	NKVHLSFSPSQSLPASQTHMR3	42513.5	25302.5	13156.3
P14046	Q6IE52;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	NKVHLSFSPSQSLPASQTHMR	NKVHLSFSPSQSLPASQTHMR	4	NKVHLSFSPSQSLPASQTHMR4	210975	186104	161435
A0A8I6AAY1	A0A8I6AAY1	A0A8I6AAY1_RAT	Cox7a2l	Cytochrome c oxidase subunit 7A2 like	1	NKVPELQR	NKVPELQR	2	NKVPELQR2	46366.8	37967	37051.9
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	NKVPWNR	NKVPWNR	2	NKVPWNR2	154008	122555	101251
Q6P6Q2	A0A8I5ZR22;Q6IG01;Q10758;Q6P6Q2	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	0	NKYEDEINK	NKYEDEINK	2	NKYEDEINK2	10094.8	7952.67	17028.8
Q6P6Q2	A0A8I5ZR22;Q6IG01;Q10758;Q6P6Q2	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	0	NKYEDEINK	NKYEDEINK	3	NKYEDEINK3	14244.9	10671.3	6265.74
A0A8I6ANH8	A0A8I6ANH8	A0A8I6ANH8_RAT	Dock6	Dedicator of cytokinesis 6	1	NLAADSLLPTLLER	NLAADSLLPTLLER	2	NLAADSLLPTLLER2	4838.46	3878.86	
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	NLAALYSIGDTYTVFQTLDK	NLAALYSIGDTYTVFQTLDK	3	NLAALYSIGDTYTVFQTLDK3		3421.67	7059.58
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	NLADCLR	NLADC(UniMod:4)LR	2	NLADC(UniMod:4)LR2	3.56796e+06	3.48715e+06	4.01108e+06
Q6PDU7	Q6PDU7	ATP5L_RAT	Atp5mg	ATP synthase subunit g, mitochondrial	1	NLADKAPSMVAAAVTYSK	NLADKAPSMVAAAVTYSK	3	NLADKAPSMVAAAVTYSK3	5900.49	10020	13961.6
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	NLADQGIINYPYSTR	NLADQGIINYPYSTR	2	NLADQGIINYPYSTR2	5969.51	5289.63	9868.24
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	NLAEEIEMYMNNMSSPLTSR	NLAEEIEMYMNNMSSPLTSR	3	NLAEEIEMYMNNMSSPLTSR3	8628.94	4584.21	
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	NLAEKENIIK	NLAEKENIIK	3	NLAEKENIIK3	17840	21469.4	27682.9
P09811	P53534;P09811;P09812	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	0	NLAENISR	NLAENISR	2	NLAENISR2	417077	381098	392817
D3Z9C0	D3Z9C0	D3Z9C0_RAT	Mios	Meiosis regulator for oocyte development	1	NLAIFDLR	NLAIFDLR	2	NLAIFDLR2	5940.3	9095.55	11520.2
A0A0G2K1D2	A0A0G2K1D2	A0A0G2K1D2_RAT	Rap1gds1	Rap1 GTPase-GDP dissociation stimulator 1	1	NLAIPVVNK	NLAIPVVNK	2	NLAIPVVNK2	15415.4	6862	11391.1
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	NLAKPMGAQTDER	NLAKPMGAQTDER	3	NLAKPMGAQTDER3	8478.03	9412.19	4112.76
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	NLALCPANHAPLQEAAVIPR	NLALC(UniMod:4)PANHAPLQEAAVIPR	3	NLALC(UniMod:4)PANHAPLQEAAVIPR3	14597.1	6492.02	15139.1
Q63632	Q63632	S12A4_RAT	Slc12a4	Solute carrier family 12 member 4	1	NLALFEEELDIRPK	NLALFEEELDIRPK	3	NLALFEEELDIRPK3	11987.1	5667.11	4917.86
G3V6N7	G3V6N7	G3V6N7_RAT	Slc12a6	Solute carrier family 12, member 6	1	NLALFEEEMDTRPK	NLALFEEEMDTRPK	3	NLALFEEEMDTRPK3	15812.1	19405.4	30287.5
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	NLALFLK	NLALFLK	2	NLALFLK2	520392	425093	473774
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	NLALGVPYHGEEPLALR	NLALGVPYHGEEPLALR	2	NLALGVPYHGEEPLALR2	6953.67	9149.41	
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	NLALGVPYHGEEPLALR	NLALGVPYHGEEPLALR	3	NLALGVPYHGEEPLALR3	102949	100031	105021
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	NLALLEEAK	NLALLEEAK	2	NLALLEEAK2	196837	208370	211503
F1M2D4	F1M2D4	F1M2D4_RAT	Arhgap23	Rho GTPase activating protein 23	1	NLALVFGPTLVR	NLALVFGPTLVR	2	NLALVFGPTLVR2	5107.82	3390.69	3654.76
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	NLAMEATYINHNFSQQCLR	NLAMEATYINHNFSQQC(UniMod:4)LR	3	NLAMEATYINHNFSQQC(UniMod:4)LR3	115193	119883	147034
Q7TP47	Q7TP47	HNRPQ_RAT	Syncrip	Heterogeneous nuclear ribonucleoprotein Q	1	NLANTVTEEILEK	NLANTVTEEILEK	2	NLANTVTEEILEK2	22509.6	22262.5	19763.9
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	NLAPLVEDVQSK	NLAPLVEDVQSK	2	NLAPLVEDVQSK2	314581	278348	250982
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	NLAPLVEDVQSK	NLAPLVEDVQSK	3	NLAPLVEDVQSK3	113037	136516	144566
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	NLAPLVEDVQSKLK	NLAPLVEDVQSKLK	3	NLAPLVEDVQSKLK3	5127.77	1828.68	8907.06
D3ZZC1	D3ZZC1	D3ZZC1_RAT	Txndc5	protein disulfide-isomerase	1	NLAPTWEELSK	NLAPTWEELSK	2	NLAPTWEELSK2	62081.3	51294.2	52835.1
D3ZZC1	D3ZZC1	D3ZZC1_RAT	Txndc5	protein disulfide-isomerase	1	NLAPTWEELSKK	NLAPTWEELSKK	3	NLAPTWEELSKK3	4824.9	3389.87	
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	NLASGEVGFFPSDAVK	NLASGEVGFFPSDAVK	2	NLASGEVGFFPSDAVK2	5895.94	7459.41	7067.09
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	NLASGEVGFFPSDAVKPSPCVPK	NLASGEVGFFPSDAVKPSPC(UniMod:4)VPK	3	NLASGEVGFFPSDAVKPSPC(UniMod:4)VPK3	10858.5	15379.5	17334.2
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	NLASRPYSLHAHGLSYEK	NLASRPYSLHAHGLSYEK	3	NLASRPYSLHAHGLSYEK3	251216	283256	220952
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	NLASRPYSLHAHGLSYEK	NLASRPYSLHAHGLSYEK	4	NLASRPYSLHAHGLSYEK4	489186	744307	754360
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	NLAVGLFTHTPSLASLSLSSNLLGR	NLAVGLFTHTPSLASLSLSSNLLGR	3	NLAVGLFTHTPSLASLSLSSNLLGR3	337789	377126	390885
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	NLAVGLFTHTPSLASLSLSSNLLGR	NLAVGLFTHTPSLASLSLSSNLLGR	4	NLAVGLFTHTPSLASLSLSSNLLGR4		6273.39	5627.45
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	NLAVMDDKVK	NLAVMDDKVK	2	NLAVMDDKVK2	6362.65		2234.47
A0A0G2K2P3	A0A0G2K2P3	A0A0G2K2P3_RAT	Tnfaip8	TNF alpha induced protein 8	1	NLAVQAQK	NLAVQAQK	2	NLAVQAQK2	37599.1	41105.4	35978.5
Q63321	Q63321	PLOD1_RAT	Plod1	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1	1	NLAYDTLPVVIHGNGPTK	NLAYDTLPVVIHGNGPTK	3	NLAYDTLPVVIHGNGPTK3	1321.45		4176.5
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	NLCAVELPSSVK	NLC(UniMod:4)AVELPSSVK	2	NLC(UniMod:4)AVELPSSVK2	6169.83	4526.8	9407.71
B0BN83	B0BN83	B0BN83_RAT	Armc1	Armadillo repeat-containing protein 1	1	NLCEEALLK	NLC(UniMod:4)EEALLK	2	NLC(UniMod:4)EEALLK2	9010.88	15012.5	
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	NLCQELEAK	NLC(UniMod:4)QELEAK	2	NLC(UniMod:4)QELEAK2	37296.4	31408	26291.9
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	NLCSDDTPMVR	NLC(UniMod:4)SDDTPMVR	2	NLC(UniMod:4)SDDTPMVR2	333853	342403	295604
B2RYM5	B2RYM5	BRCC3_RAT	Brcc3	Lys-63-specific deubiquitinase BRCC36	1	NLCSQMSAVSGPLLQWLEDRLEQNQQHLR	NLC(UniMod:4)SQMSAVSGPLLQWLEDRLEQNQQHLR	4	NLC(UniMod:4)SQMSAVSGPLLQWLEDRLEQNQQHLR4	7225.08	2991.48	3016.61
G3V6K6	G3V6K6	G3V6K6_RAT	Egfr	Receptor protein-tyrosine kinase	1	NLCYANTINWK	NLC(UniMod:4)YANTINWK	2	NLC(UniMod:4)YANTINWK2	8594.63	4053.49	2788.32
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	NLCYHAQTR	NLC(UniMod:4)YHAQTR	2	NLC(UniMod:4)YHAQTR2	4509.43	5775.27	2844.88
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	NLCYHAQTR	NLC(UniMod:4)YHAQTR	3	NLC(UniMod:4)YHAQTR3	7922.64	8450.17	8284.9
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	NLDAASASYSYSVLILK	NLDAASASYSYSVLILK	2	NLDAASASYSYSVLILK2	36830.8	37244.1	50393.7
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	NLDAASASYSYSVLILK	NLDAASASYSYSVLILK	3	NLDAASASYSYSVLILK3	9612.75	9804.14	
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	NLDADIWK	NLDADIWK	2	NLDADIWK2	35665.5	29585.3	39008.3
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	NLDADIWKK	NLDADIWKK	2	NLDADIWKK2	9809.67		
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	NLDALENAQAIK	NLDALENAQAIK	2	NLDALENAQAIK2	167547	168652	182012
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	NLDALENAQAIKK	NLDALENAQAIKK	2	NLDALENAQAIKK2	4102.51	3407.22	8050.8
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	NLDALENAQAIKK	NLDALENAQAIKK	3	NLDALENAQAIKK3	54087	73104.8	72052.3
O08775	O08775	VGFR2_RAT	Kdr	Vascular endothelial growth factor receptor 2	1	NLDALWK	NLDALWK	2	NLDALWK2	47413	28665.2	38865.6
Q63737	A0A8I6A6H0;Q63737	PHLP_RAT	Pdcl	Phosducin-like protein	0	NLDDEEFLQQYR	NLDDEEFLQQYR	2	NLDDEEFLQQYR2	26246.5	35494.2	34991.1
Q9EPH8	D4A233;B5DF80;Q9EPH8	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	0	NLDDGIDDER	NLDDGIDDER	2	NLDDGIDDER2	45728.9	38351.9	42802.6
Q9EPH8	B5DF80;Q9EPH8	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	0	NLDDGIDDERLR	NLDDGIDDERLR	3	NLDDGIDDERLR3	35539.1	23535.6	11894.3
D4A305	D4A305	D4A305_RAT	Mix23	Protein MIX23	1	NLDDLTLLK	NLDDLTLLK	2	NLDDLTLLK2	27948.1	24802.4	24669.8
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	NLDEQLSAPK	NLDEQLSAPK	2	NLDEQLSAPK2	11926.1	14241	10185.6
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	NLDFGIDMDSR	NLDFGIDMDSR	2	NLDFGIDMDSR2	49525.5	54523.8	33362.4
Q6AYT3	Q6AYT3;A0A8I5YBA4	RTCB_RAT	Rtcb	RNA-splicing ligase RtcB homolog	0	NLDFQDVLDK	NLDFQDVLDK	2	NLDFQDVLDK2	20346.5	17543.8	26363.8
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	NLDHPHIVK	NLDHPHIVK	2	NLDHPHIVK2	4232.79	1969.63	3511.21
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	NLDIDPK	NLDIDPK	2	NLDIDPK2	13456.8	12191.6	9064.15
Q5XIF6	P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9;Q6AY56	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	NLDIERPTYTNLNR	NLDIERPTYTNLNR	2	NLDIERPTYTNLNR2	144399	160196	159569
Q5XIF6	P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9;Q6AY56	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	NLDIERPTYTNLNR	NLDIERPTYTNLNR	3	NLDIERPTYTNLNR3	3.68654e+07	3.54751e+07	3.57995e+07
Q5XIF6	Q5XIF6;Q6AYZ1;Q6P9V9;Q6AY56	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	NLDIERPTYTNLNRLISQIVSSITASLR	NLDIERPTYTNLNRLISQIVSSITASLR	4	NLDIERPTYTNLNRLISQIVSSITASLR4		4679.37	6523.43
P00507	P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	1	NLDKEYLPIGGLADFCK	NLDKEYLPIGGLADFC(UniMod:4)K	2	NLDKEYLPIGGLADFC(UniMod:4)K2	43025.5	45591.2	31675.1
P00507	P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	1	NLDKEYLPIGGLADFCK	NLDKEYLPIGGLADFC(UniMod:4)K	3	NLDKEYLPIGGLADFC(UniMod:4)K3	258290	252227	268695
Q6IG03	Q6IG03	K2C73_RAT	Krt73	Keratin, type II cytoskeletal 73	1	NLDLDSIIAEVR	NLDLDSIIAEVR	2	NLDLDSIIAEVR2		17962.9	
Q2TGI9	Q2TGI9	Q2TGI9_RAT	Zdhhc21	Palmitoyltransferase	1	NLDLFVVR	NLDLFVVR	2	NLDLFVVR2	4798.9	2831.89	
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	NLDLLSQLNER	NLDLLSQLNER	2	NLDLLSQLNER2	67293.1	76141.7	58701.8
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	NLDLLYK	NLDLLYK	2	NLDLLYK2	21597.1	28216.5	25816.2
A0A0G2JYR1	A0A0G2JYR1	A0A0G2JYR1_RAT	Exoc6b	Exocyst complex component	1	NLDNIVLQQPR	NLDNIVLQQPR	2	NLDNIVLQQPR2	6372.47	5952.94	
A0A0G2JTY3	A0A0G2JTY3	A0A0G2JTY3_RAT	Slc37a4	Solute carrier family 37 member 4	1	NLDPAPSK	NLDPAPSK	2	NLDPAPSK2	55597.1	34557.6	49178.4
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	NLDPEQMSQVLDAMFEK	NLDPEQMSQVLDAMFEK	3	NLDPEQMSQVLDAMFEK3	81585	80993.2	90496.3
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	NLDPFNEHSDEELWK	NLDPFNEHSDEELWK	2	NLDPFNEHSDEELWK2	16094.4	11806.3	7031.24
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	NLDPFNEHSDEELWK	NLDPFNEHSDEELWK	3	NLDPFNEHSDEELWK3	85861.5	75337.9	80224.2
B2RYP8	B2RYP8	B2RYP8_RAT	Tubgcp2	Gamma-tubulin complex component	1	NLDPLVYLLSK	NLDPLVYLLSK	2	NLDPLVYLLSK2	7543.02	11805.9	11630.8
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	NLDQLRDELSTFIR	NLDQLRDELSTFIR	3	NLDQLRDELSTFIR3	20328	24859	21115.6
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	NLDQMKK	NLDQMKK	2	NLDQMKK2	23828.1	18939.1	13267.8
P47875	P47875	CSRP1_RAT	Csrp1	Cysteine and glycine-rich protein 1	1	NLDSTTVAVHGEEIYCK	NLDSTTVAVHGEEIYC(UniMod:4)K	2	NLDSTTVAVHGEEIYC(UniMod:4)K2	10308.2		2782.65
P47875	P47875	CSRP1_RAT	Csrp1	Cysteine and glycine-rich protein 1	1	NLDSTTVAVHGEEIYCK	NLDSTTVAVHGEEIYC(UniMod:4)K	3	NLDSTTVAVHGEEIYC(UniMod:4)K3	167636	126091	145117
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	NLDTGEEIPLSLAEEK	NLDTGEEIPLSLAEEK	2	NLDTGEEIPLSLAEEK2	158829	147495	154500
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	NLDTGEEIPLSLAEEK	NLDTGEEIPLSLAEEK	3	NLDTGEEIPLSLAEEK3	8535.56	22368.3	11060.6
P29994	P29994;P29995;Q63269	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	0	NLDWFPR	NLDWFPR	2	NLDWFPR2	86329.6	90916.8	85695.4
P13221	P13221	AATC_RAT	Got1	Aspartate aminotransferase, cytoplasmic	1	NLDYVATSINEAVTK	NLDYVATSINEAVTK	2	NLDYVATSINEAVTK2	16576.9	16283.3	17555.2
P13221	P13221	AATC_RAT	Got1	Aspartate aminotransferase, cytoplasmic	1	NLDYVATSINEAVTK	NLDYVATSINEAVTK	3	NLDYVATSINEAVTK3	12135		6019.11
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	NLEAIVQK	NLEAIVQK	2	NLEAIVQK2	66783.1	58486.5	78945.3
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	NLEAMNPPLFLR	NLEAMNPPLFLR	2	NLEAMNPPLFLR2	9377.92	15910.8	6457.1
Q9WVC0	Q9WVC0;A0A8I6ARI4	SEPT7_RAT	Septin7	Septin-7	0	NLEAQHK	NLEAQHK	1	NLEAQHK1	1013.78		3718.56
P06685	Q64541;P06687;P06685;P06686	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	0	NLEAVETLGSTSTICSDK	NLEAVETLGSTSTIC(UniMod:4)SDK	2	NLEAVETLGSTSTIC(UniMod:4)SDK2	38463.7	26819.6	28454.2
Q9WTV0	Q9WTV0	PREB_RAT	Preb	Prolactin regulatory element-binding protein	1	NLEAVQTDFSTEPLQK	NLEAVQTDFSTEPLQK	2	NLEAVQTDFSTEPLQK2	6248.33	5984.13	5314.01
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	NLEEEQK	NLEEEQK	1	NLEEEQK1	5723.21		7214.17
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	NLEEEQK	NLEEEQK	2	NLEEEQK2	78808		75492.6
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	NLEELHLPTGDGIHQVAK	NLEELHLPTGDGIHQVAK	4	NLEELHLPTGDGIHQVAK4	6630.39	4230.23	3691.69
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	NLEELHLPTGDGIHQVAKPIVR	NLEELHLPTGDGIHQVAKPIVR	4	NLEELHLPTGDGIHQVAKPIVR4	12855.4	13053.2	18316.2
Q498T9	Q498T9	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	1	NLEELYLVGSLSHDISK	NLEELYLVGSLSHDISK	3	NLEELYLVGSLSHDISK3	15110.5	16653.7	24789.3
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	NLEENYCR	NLEENYC(UniMod:4)R	2	NLEENYC(UniMod:4)R2	1.88104e+06	1.83575e+06	1.97435e+06
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	NLEFYSQWQK	NLEFYSQWQK	2	NLEFYSQWQK2	6452.31	11493.4	9563
D4A031	D4A031	D4A031_RAT	Ddx42	DEAD-box helicase 42	1	NLEGANQHVSK	NLEGANQHVSK	2	NLEGANQHVSK2	1577.43		2117.84
Q9WVC0	Q9WVC0	SEPT7_RAT	Septin7	Septin-7	1	NLEGYVGFANLPNQVYR	NLEGYVGFANLPNQVYR	2	NLEGYVGFANLPNQVYR2	92390.2	71898.5	83450.5
Q9WVC0	Q9WVC0	SEPT7_RAT	Septin7	Septin-7	1	NLEGYVGFANLPNQVYR	NLEGYVGFANLPNQVYR	3	NLEGYVGFANLPNQVYR3	48902.8	35483.9	57642.1
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	NLEKENYDVWAK	NLEKENYDVWAK	2	NLEKENYDVWAK2	760.962		
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	NLEKENYDVWAK	NLEKENYDVWAK	3	NLEKENYDVWAK3	17932.9	10804.5	
B2RZ57	B2RZ57	B2RZ57_RAT	Mrpl18	Mitochondrial ribosomal protein L18	1	NLELLGVAR	NLELLGVAR	2	NLELLGVAR2	12481.1	12654.8	8249.05
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	NLELLSEIEQLIK	NLELLSEIEQLIK	2	NLELLSEIEQLIK2	6772.88		
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	NLELSQDMK	NLELSQDMK	2	NLELSQDMK2	10893.3	9963.88	7977.84
A0A8I6A9E8	A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	1	NLELSQIQEIVDCMYPVEYGK	NLELSQIQEIVDC(UniMod:4)MYPVEYGK	3	NLELSQIQEIVDC(UniMod:4)MYPVEYGK3	2576.8	6322.24	5089.32
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	NLENDVNSLK	NLENDVNSLK	2	NLENDVNSLK2	66366	61834.9	81571.7
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	NLENDVNSLKDQLEDLKK	NLENDVNSLKDQLEDLKK	3	NLENDVNSLKDQLEDLKK3	9208.32	12340.1	9618.6
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	NLENDVNSLKDQLEDLKK	NLENDVNSLKDQLEDLKK	4	NLENDVNSLKDQLEDLKK4	13541.6	7673.67	7938.88
B0LT89	B0LT89	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	1	NLENGTLQPSDLER	NLENGTLQPSDLER	2	NLENGTLQPSDLER2	228113	225454	234669
A0A8I5ZVY2	A0A8I5ZVY2	A0A8I5ZVY2_RAT	Mrps6	Mitochondrial ribosomal protein S6	1	NLENLGER	NLENLGER	2	NLENLGER2	5582.25		4818.61
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	NLENVQNQMK	NLENVQNQMK	2	NLENVQNQMK2	56394.8	44250.6	48267.2
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	NLEPEWAAAATEVK	NLEPEWAAAATEVK	2	NLEPEWAAAATEVK2	2.99705e+06	3.48645e+06	3.4873e+06
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	NLEPEWAAAATEVK	NLEPEWAAAATEVK	3	NLEPEWAAAATEVK3	87467.8	107211	107779
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	NLEPEWAAAATEVKEQTK	NLEPEWAAAATEVKEQTK	3	NLEPEWAAAATEVKEQTK3	71667.6	103971	122895
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	NLEQEADR	NLEQEADR	2	NLEQEADR2	28826.2	28558.3	27269.8
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	NLEQEADRLIDK	NLEQEADRLIDK	3	NLEQEADRLIDK3		21511.4	14780.2
P58405	P58405	STRN3_RAT	Strn3	Striatin-3	1	NLEQILNGGESPK	NLEQILNGGESPK	2	NLEQILNGGESPK2	11258.7	17946.6	13019.2
P47858	P47858	PFKAM_RAT	Pfkm	ATP-dependent 6-phosphofructokinase, muscle type	1	NLEQISANITK	NLEQISANITK	2	NLEQISANITK2	14897.2	17106.4	9486.83
B2GUX8	B2GUX8	B2GUX8_RAT	Sh3bp5l	SH3 domain-binding protein 5	1	NLEQISEQIHAR	NLEQISEQIHAR	2	NLEQISEQIHAR2	2168.91		4901.28
B2GUX8	B2GUX8	B2GUX8_RAT	Sh3bp5l	SH3 domain-binding protein 5	1	NLEQISEQIHAR	NLEQISEQIHAR	3	NLEQISEQIHAR3	23605	19571.6	17774.5
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	NLEQLGGTVTNSAGSGTSSR	NLEQLGGTVTNSAGSGTSSR	2	NLEQLGGTVTNSAGSGTSSR2	45048.1	49521.1	53213.1
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	NLEQLGGTVTNSAGSGTSSR	NLEQLGGTVTNSAGSGTSSR	3	NLEQLGGTVTNSAGSGTSSR3	129867	71361.8	119206
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	NLEQLVK	NLEQLVK	1	NLEQLVK1	162978	95137.2	90337.2
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	NLEQLVK	NLEQLVK	2	NLEQLVK2	3.73302e+06	3.00458e+06	2.89191e+06
A0A0G2K0I6	A0A0G2K0I6	A0A0G2K0I6_RAT	Cdh5	Cadherin 5	1	NLEQPSSFTVK	NLEQPSSFTVK	2	NLEQPSSFTVK2	98022	93168.8	100795
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	NLESALR	NLESALR	2	NLESALR2	341586	358516	390056
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	NLESAVSQIEK	NLESAVSQIEK	2	NLESAVSQIEK2	35103.3	31101	39266
D4ACF1	D4ACF1	D4ACF1_RAT	Eif4enif1	Eukaryotic translation initiation factor 4E nuclear import factor 1	1	NLESHLLAPAEIPGQPVPK	NLESHLLAPAEIPGQPVPK	3	NLESHLLAPAEIPGQPVPK3	6621.53	6743.69	5499.83
A0A8I6AAA9	A0A8I6AAA9	A0A8I6AAA9_RAT	Lrch1	Leucine rich repeats and calponin homology domain containing 1	1	NLESIDPQFTIR	NLESIDPQFTIR	2	NLESIDPQFTIR2	38168.4	42588.5	44672.3
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	NLESLYFSNNK	NLESLYFSNNK	2	NLESLYFSNNK2	18590.1	22076.2	18023.5
P29410	A0A8I5ZQQ9;P29410	KAD2_RAT	Ak2	Adenylate kinase 2, mitochondrial	0	NLETPSCK	NLETPSC(UniMod:4)K	2	NLETPSC(UniMod:4)K2	266745	275129	302896
Q5PPG7	Q5PPG7	EIF2D_RAT	Eif2d	Eukaryotic translation initiation factor 2D	1	NLETYGLDPCSVAAILQQR	NLETYGLDPC(UniMod:4)SVAAILQQR	3	NLETYGLDPC(UniMod:4)SVAAILQQR3			3702.3
D4A8F2	D4A8F2	D4A8F2_RAT	Rsu1	Ras suppressor protein 1	1	NLEVLNFFNNQIEELPTQISSLQK	NLEVLNFFNNQIEELPTQISSLQK	3	NLEVLNFFNNQIEELPTQISSLQK3	48582.5	39462.4	40014.3
D3ZF26	D3ZF26	D3ZF26_RAT	Tnks1bp1	Tankyrase 1 binding protein 1	1	NLEVSCDLESGGSR	NLEVSC(UniMod:4)DLESGGSR	2	NLEVSC(UniMod:4)DLESGGSR2			2604.24
D3ZMS7	D3ZMS7	D3ZMS7_RAT	ENSRNOG00000070810	Ig-like domain-containing protein	1	NLEWYQQK	NLEWYQQK	2	NLEWYQQK2	77808.4	57935.3	55290.3
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	NLFDNQGNASPPAGPSNMSK	NLFDNQGNASPPAGPSNMSK	3	NLFDNQGNASPPAGPSNMSK3	788596	810143	829282
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	NLFEDQNTLTSICEK	NLFEDQNTLTSIC(UniMod:4)EK	2	NLFEDQNTLTSIC(UniMod:4)EK2	1118.33	3523.38	2592.65
Q793F9	Q793F9	VPS4A_RAT	Vps4a	Vacuolar protein sorting-associated protein 4A	1	NLFELAR	NLFELAR	2	NLFELAR2	41236.5	37723.8	39928.2
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	NLFEMAINLAK	NLFEMAINLAK	2	NLFEMAINLAK2	7873.64	9706.42	9138.72
A0A8I5ZTL7	A0A8I5ZTL7;A0A8I6A6I4;A0A8I5ZV31	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	0	NLFEQFR	NLFEQFR	2	NLFEQFR2	27653.9	29108.2	22591.7
O08769	O08769	O08769_RAT	Cdkn1b	Cyclin dependent kinase inhibitor	1	NLFGPVNHEELTR	NLFGPVNHEELTR	3	NLFGPVNHEELTR3	11477.7	5519.22	4780.51
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	NLFIGHFHTPK	NLFIGHFHTPK	3	NLFIGHFHTPK3	13569.9	24078.4	21242
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	NLFKPSLPAQSWK	NLFKPSLPAQSWK	3	NLFKPSLPAQSWK3	19420.7	25727.6	21548.6
G3V8L1	G3V8L1	G3V8L1_RAT	Pycard	PYD and CARD domain containing	1	NLFLEALR	NLFLEALR	2	NLFLEALR2	21469.1	20393.5	23124.1
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	NLFLSNVFHK	NLFLSNVFHK	2	NLFLSNVFHK2	127606	122982	129542
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	NLFLSNVFHK	NLFLSNVFHK	3	NLFLSNVFHK3	293252	279250	281218
Q9Z142	Q9Z142	TMM33_RAT	Tmem33	Transmembrane protein 33	1	NLFNELR	NLFNELR	2	NLFNELR2	89012.6	74197.6	80519.6
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	NLFNVVDCK	NLFNVVDC(UniMod:4)K	2	NLFNVVDC(UniMod:4)K2	232757	260557	261972
A0A8I5ZVY6	A0A8I5ZVY6	A0A8I5ZVY6_RAT	Rint1	RAD50 interactor 1	1	NLFPLFSHYCK	NLFPLFSHYC(UniMod:4)K	3	NLFPLFSHYC(UniMod:4)K3	10883.8	12427.1	9425.32
A0A8I6GH80	A0A8I6GH80	A0A8I6GH80_RAT	Vps4b	vesicle-fusing ATPase	1	NLFQLAR	NLFQLAR	2	NLFQLAR2	32101.8	29014.1	43004.9
G3V8E2	G3V8E2;A0A8I6G7M4	G3V8E2_RAT	Strip1	Striatin interacting protein 1	0	NLFSCINLLR	NLFSC(UniMod:4)INLLR	2	NLFSC(UniMod:4)INLLR2	132878	103622	98068.9
Q62761	Q62761	KC1G1_RAT	Csnk1g1	Casein kinase I isoform gamma-1	1	NLFTDLFER	NLFTDLFER	2	NLFTDLFER2	9370.96	17230.6	14177.7
Q9Z118	Q9Z118	PTBP3_RAT	Ptbp3	Polypyrimidine tract-binding protein 3	1	NLFTEAGCSVK	NLFTEAGC(UniMod:4)SVK	2	NLFTEAGC(UniMod:4)SVK2	23560.3	19922.4	13664.4
P97521	P97521	MCAT_RAT	Slc25a20	Mitochondrial carnitine/acylcarnitine carrier protein	1	NLFTPQGK	NLFTPQGK	2	NLFTPQGK2	293781	253440	273674
Q5RJQ4	Q5RJQ4	SIR2_RAT	Sirt2	NAD-dependent protein deacetylase sirtuin-2	1	NLFTQTLGLGSQK	NLFTQTLGLGSQK	2	NLFTQTLGLGSQK2	23723.8	19882.1	34904.6
Q5RJQ4	Q5RJQ4	SIR2_RAT	Sirt2	NAD-dependent protein deacetylase sirtuin-2	1	NLFTQTLGLGSQK	NLFTQTLGLGSQK	3	NLFTQTLGLGSQK3	7888.87	10518.5	10738.3
A1EC81	A1EC81	A1EC81_RAT	Mmp28	Matrix metallopeptidase 28	1	NLFVVLAHEIGHTLGLTHSPAPR	NLFVVLAHEIGHTLGLTHSPAPR	4	NLFVVLAHEIGHTLGLTHSPAPR4	7307.29	5648.41	
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	NLFWTSYDTNK	NLFWTSYDTNK	2	NLFWTSYDTNK2	140164	155837	153265
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	NLFWTSYDTNKK	NLFWTSYDTNKK	2	NLFWTSYDTNKK2	65556.9	62100.1	47884.8
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	NLFWTSYDTNKK	NLFWTSYDTNKK	3	NLFWTSYDTNKK3	63234.5	74518.7	67317.7
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	NLFYLPHGLSIDTDGNYWVTDVALHQVFK	NLFYLPHGLSIDTDGNYWVTDVALHQVFK	4	NLFYLPHGLSIDTDGNYWVTDVALHQVFK4	8199.7	8963.4	17904.7
Q9JK72	Q9JK72	CCS_RAT	Ccs	Copper chaperone for superoxide dismutase	1	NLGAAVAIMEGSGTVQGVVR	NLGAAVAIMEGSGTVQGVVR	2	NLGAAVAIMEGSGTVQGVVR2	7155.78	4086.46	5254.35
Q9JK72	Q9JK72	CCS_RAT	Ccs	Copper chaperone for superoxide dismutase	1	NLGAAVAIMEGSGTVQGVVR	NLGAAVAIMEGSGTVQGVVR	3	NLGAAVAIMEGSGTVQGVVR3	11096.3	10131.4	13377.6
P07867	P07867	LIPC_RAT	Lipc	Hepatic triacylglycerol lipase	1	NLGATEER	NLGATEER	2	NLGATEER2		2942	
Q5XIA5	Q5XIA5	Q5XIA5_RAT	Coasy	Coenzyme A synthase	1	NLGAYIIDSDHLGHR	NLGAYIIDSDHLGHR	3	NLGAYIIDSDHLGHR3	3038.92	5321.97	1743.44
Q5XIA5	Q5XIA5	Q5XIA5_RAT	Coasy	Coenzyme A synthase	1	NLGAYIIDSDHLGHR	NLGAYIIDSDHLGHR	4	NLGAYIIDSDHLGHR4	6238.08	12277.4	2933.69
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	NLGESEIR	NLGESEIR	2	NLGESEIR2	217133	188866	253284
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	NLGESEIRDAMMAK	NLGESEIRDAMMAK	3	NLGESEIRDAMMAK3	7622.75	11709.7	11467.1
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	NLGHWLGMITLAK	NLGHWLGMITLAK	2	NLGHWLGMITLAK2			1837.76
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	NLGHWLGMITLAK	NLGHWLGMITLAK	3	NLGHWLGMITLAK3	6268.78	9458.59	7922.65
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	NLGIPILTVLGDSK	NLGIPILTVLGDSK	2	NLGIPILTVLGDSK2	172092	183447	178212
B4F7E7	B4F7E7	PALS1_RAT	Pals1	Protein PALS1	1	NLGLASPEEHPK	NLGLASPEEHPK	2	NLGLASPEEHPK2	1661.72		722.553
B4F7E7	B4F7E7	PALS1_RAT	Pals1	Protein PALS1	1	NLGLASPEEHPK	NLGLASPEEHPK	3	NLGLASPEEHPK3	3876.33	4473.7	6052.27
D3ZMI0	D3ZMI0	D3ZMI0_RAT	Angptl8	Angiopoietin-like 8	1	NLGLFDQALEFLGR	NLGLFDQALEFLGR	2	NLGLFDQALEFLGR2	76461	18974	2002.89
D3ZMI0	D3ZMI0	D3ZMI0_RAT	Angptl8	Angiopoietin-like 8	1	NLGLFDQALEFLGR	NLGLFDQALEFLGR	3	NLGLFDQALEFLGR3		1833.98	2707.85
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	NLGLFQHHDAITGTAK	NLGLFQHHDAITGTAK	3	NLGLFQHHDAITGTAK3	56060.8	64798.5	49993.1
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	NLGLFQHHDAITGTAK	NLGLFQHHDAITGTAK	4	NLGLFQHHDAITGTAK4	15005.4	8645.28	12710.1
A0A8I6AAQ5	A0A8I6AAQ5	A0A8I6AAQ5_RAT	Gask1a	Golgi associated kinase 1A	1	NLGLWTGQALPR	NLGLWTGQALPR	2	NLGLWTGQALPR2	3463.75	10039.2	5708.89
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	NLGLYYDNR	NLGLYYDNR	2	NLGLYYDNR2	12451	9899.9	16349.2
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	NLGMVCR	NLGMVC(UniMod:4)R	2	NLGMVC(UniMod:4)R2	42534	69090.5	66919.3
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	NLGPGMTK	NLGPGMTK	1	NLGPGMTK1	40472.8	31733	22344.8
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	NLGPGMTK	NLGPGMTK	2	NLGPGMTK2	1.85547e+06	1.76383e+06	1.73216e+06
F1LVV4	F1LVV4	F1LVV4_RAT	Rcc2	Regulator of chromosome condensation 2	1	NLGQNLWGPHR	NLGQNLWGPHR	3	NLGQNLWGPHR3	8858.76	10487.1	
Q4KM74	Q4KM74	SC22B_RAT	Sec22b	Vesicle-trafficking protein SEC22b	1	NLGSINTELQDVQR	NLGSINTELQDVQR	2	NLGSINTELQDVQR2	51421.4	35419	46356.6
Q4KM74	Q4KM74	SC22B_RAT	Sec22b	Vesicle-trafficking protein SEC22b	1	NLGSINTELQDVQR	NLGSINTELQDVQR	3	NLGSINTELQDVQR3	18758.3	17191.6	17833.5
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	NLGTALAELR	NLGTALAELR	2	NLGTALAELR2	3.85487e+06	3.74361e+06	4.07026e+06
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	NLGTATLNIQWPK	NLGTATLNIQWPK	2	NLGTATLNIQWPK2	107888	117377	118949
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	NLGTIAK	NLGTIAK	1	NLGTIAK1	54016.2	43585	36867
F7EUW3	F7EUW3	F7EUW3_RAT	C2cd2l	C2CD2-like	1	NLGTPTSSTPR	NLGTPTSSTPR	2	NLGTPTSSTPR2	28194.9	19224.5	21294.2
F7EUW3	F7EUW3	F7EUW3_RAT	C2cd2l	C2CD2-like	1	NLGTPTSSTPRPSITPTK	NLGTPTSSTPRPSITPTK	3	NLGTPTSSTPRPSITPTK3	51776.8	56836.9	38677.4
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	NLGVKPR	NLGVKPR	2	NLGVKPR2	23097.8	32272.6	
Q6MG51	Q6MG51	CF047_RAT	G4	Uncharacterized protein C6orf47 homolog	1	NLGVSPQGR	NLGVSPQGR	2	NLGVSPQGR2	47396.1	50270.9	61111.3
Q641X9	Q641X9	RM09_RAT	Mrpl9	Large ribosomal subunit protein bL9m	1	NLGVVVAPHALR	NLGVVVAPHALR	3	NLGVVVAPHALR3	5128.03	4624.51	8150.22
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	NLHATCCEGNTLACALGR	NLHATC(UniMod:4)C(UniMod:4)EGNTLAC(UniMod:4)ALGR	3	NLHATC(UniMod:4)C(UniMod:4)EGNTLAC(UniMod:4)ALGR3	453613	467146	413059
E9PSX4	E9PSX4	E9PSX4_RAT	Il3ra	Interleukin 3 receptor subunit alpha	1	NLHCWVHDVDWLSCR	NLHC(UniMod:4)WVHDVDWLSC(UniMod:4)R	4	NLHC(UniMod:4)WVHDVDWLSC(UniMod:4)R4	3369.61	5070.84	5275.56
A0A8I5ZZ89	A0A8I5ZZ89	A0A8I5ZZ89_RAT	Elp3	Elongator complex protein 3	1	NLHDALSGHTSNNIYEAIK	NLHDALSGHTSNNIYEAIK	4	NLHDALSGHTSNNIYEAIK4	7715.4	6352.66	
D3ZAE6	D3ZAE6	D3ZAE6_RAT	Vasn	Vasorin	1	NLHDLDVSDNQLGHMPSVIQGLR	NLHDLDVSDNQLGHMPSVIQGLR	4	NLHDLDVSDNQLGHMPSVIQGLR4	9565.27	7917.47	8332.81
F7FPK8	F7FPK8	F7FPK8_RAT	Lman2	Lectin, mannose-binding 2	1	NLHGDGIALWYTR	NLHGDGIALWYTR	2	NLHGDGIALWYTR2	36727.8	27524.8	20422.7
F7FPK8	F7FPK8	F7FPK8_RAT	Lman2	Lectin, mannose-binding 2	1	NLHGDGIALWYTR	NLHGDGIALWYTR	3	NLHGDGIALWYTR3	262530	253453	270151
A0A8I6G604	A0A8I6G604	A0A8I6G604_RAT	Lman2l	Lectin, mannose-binding 2-like	1	NLHGDGLAIWYTK	NLHGDGLAIWYTK	3	NLHGDGLAIWYTK3	27637.3	24269.7	16912.5
Q6AYQ8	Q6AYQ8	FAHD1_RAT	Fahd1	Acylpyruvase FAHD1, mitochondrial	1	NLHHEVELGVLLGR	NLHHEVELGVLLGR	3	NLHHEVELGVLLGR3	11365.6	11628.1	16301.9
Q5XI64	Q5XI64	ABHD6_RAT	Abhd6	Monoacylglycerol lipase ABHD6	1	NLHLVCVDMPGHEGTTR	NLHLVC(UniMod:4)VDMPGHEGTTR	3	NLHLVC(UniMod:4)VDMPGHEGTTR3	7248.42	7181.16	9251.63
Q5XI64	Q5XI64	ABHD6_RAT	Abhd6	Monoacylglycerol lipase ABHD6	1	NLHLVCVDMPGHEGTTR	NLHLVC(UniMod:4)VDMPGHEGTTR	4	NLHLVC(UniMod:4)VDMPGHEGTTR4	55154.9	33620.2	66953.8
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	NLHPLNELFPLAYIEDPK	NLHPLNELFPLAYIEDPK	3	NLHPLNELFPLAYIEDPK3	33305.9	46794.6	57782.2
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	NLHPLNELFPLAYIEDPK	NLHPLNELFPLAYIEDPK	4	NLHPLNELFPLAYIEDPK4	869525	467942	550747
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	NLHPLNELFPLAYIEDPKMNR	NLHPLNELFPLAYIEDPKMNR	3	NLHPLNELFPLAYIEDPKMNR3	138521	118064	117887
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	NLHPLNELFPLAYIEDPKMNR	NLHPLNELFPLAYIEDPKMNR	4	NLHPLNELFPLAYIEDPKMNR4	433113	330164	315625
P47942	P47942	DPYL2_RAT	Dpysl2	Dihydropyrimidinase-related protein 2	1	NLHQSGFSLSGAQIDDNIPR	NLHQSGFSLSGAQIDDNIPR	3	NLHQSGFSLSGAQIDDNIPR3	19078.4	19733.4	20277.1
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	NLHSSDMNGLVQK	NLHSSDMNGLVQK	3	NLHSSDMNGLVQK3	16905.2	12436.3	9345.17
P05545	A0A0G2JSK1;P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	0	NLHVSQVVHK	NLHVSQVVHK	3	NLHVSQVVHK3	2307.36		
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	NLHVVFTMNPSSEGLK	NLHVVFTMNPSSEGLK	2	NLHVVFTMNPSSEGLK2	4091.04	3550.51	5196.11
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	NLHVVFTMNPSSEGLK	NLHVVFTMNPSSEGLK	3	NLHVVFTMNPSSEGLK3	32387.6	36452	35935.9
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	NLHVVFTMNPSSEGLKDR	NLHVVFTMNPSSEGLKDR	3	NLHVVFTMNPSSEGLKDR3	31568.4	29114.3	25527.2
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	NLHVVFTMNPSSEGLKDR	NLHVVFTMNPSSEGLKDR	4	NLHVVFTMNPSSEGLKDR4	118809	137208	123718
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	NLIAFSEDGSDPYVR	NLIAFSEDGSDPYVR	2	NLIAFSEDGSDPYVR2	18294.6	15917	21967.6
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	NLIATEYLNYEDGK	NLIATEYLNYEDGK	2	NLIATEYLNYEDGK2	21386.7	25346.9	10749.3
Q62868	Q62868;Q63644	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	0	NLICAFLTDR	NLIC(UniMod:4)AFLTDR	2	NLIC(UniMod:4)AFLTDR2	161005	172230	168437
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	NLIDAGVDALR	NLIDAGVDALR	2	NLIDAGVDALR2	117955	110663	114202
D3ZLZ7	D3ZLZ7	IMDH1_RAT	Impdh1	Inosine-5'-monophosphate dehydrogenase 1	1	NLIDAGVDGLR	NLIDAGVDGLR	2	NLIDAGVDGLR2	25652.7	26016.5	20369.9
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	NLIDEDGNNQWPEGLK	NLIDEDGNNQWPEGLK	2	NLIDEDGNNQWPEGLK2	98051.7	108181	98631.6
P09215	P09215	KPCD_RAT	Prkcd	Protein kinase C delta type	1	NLIDSMDQTAFK	NLIDSMDQTAFK	2	NLIDSMDQTAFK2	33115.1	31502.5	35944.7
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	NLIDVSLLSPEQLQYLNR	NLIDVSLLSPEQLQYLNR	3	NLIDVSLLSPEQLQYLNR3	23907.4	24414.7	27922.5
F1LU14	F1LU14	F1LU14_RAT	Snx32	Sorting nexin	1	NLIELAELELK	NLIELAELELK	2	NLIELAELELK2	8245.59	17511.7	12736.6
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	NLIEMSELEIK	NLIEMSELEIK	2	NLIEMSELEIK2	41831.9	48625.3	41777.6
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	NLIEQLEQDK	NLIEQLEQDK	2	NLIEQLEQDK2	6875.14	8729.11	9708.09
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	NLIGTYMCICGPGYQR	NLIGTYMC(UniMod:4)IC(UniMod:4)GPGYQR	2	NLIGTYMC(UniMod:4)IC(UniMod:4)GPGYQR2	14158.5	11494.1	13131
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	NLIGTYMCICGPGYQR	NLIGTYMC(UniMod:4)IC(UniMod:4)GPGYQR	3	NLIGTYMC(UniMod:4)IC(UniMod:4)GPGYQR3	24275.8	21192.9	20322.7
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	NLIHTSNSR	NLIHTSNSR	2	NLIHTSNSR2	26078.2	24669.2	23683.8
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	NLILKPGGSLDGMDMLQNFLQR	NLILKPGGSLDGMDMLQNFLQR	3	NLILKPGGSLDGMDMLQNFLQR3	6427.63	4642.97	3695.71
Q5RK00	Q5RK00	RM46_RAT	Mrpl46	Large ribosomal subunit protein mL46	1	NLILLVR	NLILLVR	2	NLILLVR2	5295.86	7737.05	5760.67
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	NLILSAFPR	NLILSAFPR	2	NLILSAFPR2	30095.1	22550.1	27476.5
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	NLILVVR	NLILVVR	2	NLILVVR2	1.14548e+06	1.16997e+06	1.0912e+06
D4ADM2	D4ADM2	D4ADM2_RAT	Pan3	PAN2-PAN3 deadenylation complex subunit PAN3	1	NLILYLLTDQNR	NLILYLLTDQNR	3	NLILYLLTDQNR3	6181.8	2402.78	3032.78
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	NLIMSGYSPEHDVSGISDPFLQVR	NLIMSGYSPEHDVSGISDPFLQVR	3	NLIMSGYSPEHDVSGISDPFLQVR3	67767.4	46201.9	59286.4
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	NLINATNAALQTPLHVAAR	NLINATNAALQTPLHVAAR	3	NLINATNAALQTPLHVAAR3	11420.9	8021.67	12678.3
P11730	P08413;P11730	KCC2G_RAT	Camk2g	Calcium/calmodulin-dependent protein kinase type II subunit gamma	0	NLINQMLTINPAK	NLINQMLTINPAK	2	NLINQMLTINPAK2	60590.1	43805.5	56303.9
P05696	P05696;P63319	KPCA_RAT	Prkca	Protein kinase C alpha type	0	NLIPMDPNGLSDPYVK	NLIPMDPNGLSDPYVK	2	NLIPMDPNGLSDPYVK2	529796	492229	535896
P05696	P05696;P63319	KPCA_RAT	Prkca	Protein kinase C alpha type	0	NLIPMDPNGLSDPYVK	NLIPMDPNGLSDPYVK	3	NLIPMDPNGLSDPYVK3	6834.44	15292.1	6491.54
G3V996	G3V996	G3V996_RAT	Letmd1	LETM1 domain containing 1	1	NLISYVVTK	NLISYVVTK	2	NLISYVVTK2	35432.1	33355	24347.8
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	NLITDICTEQCTLSDQLLPK	NLITDIC(UniMod:4)TEQC(UniMod:4)TLSDQLLPK	3	NLITDIC(UniMod:4)TEQC(UniMod:4)TLSDQLLPK3	57749.4	60776.3	44107.5
Q4V885	Q4V885	COL12_RAT	Colec12	Collectin-12	1	NLITNLQR	NLITNLQR	2	NLITNLQR2	14137.3		26955
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	NLKPAPVK	NLKPAPVK	2	NLKPAPVK2	3.42863e+06		
P25113	P25113	PGAM1_RAT	Pgam1	Phosphoglycerate mutase 1	1	NLKPIKPMQFLGDEETVR	NLKPIKPMQFLGDEETVR	3	NLKPIKPMQFLGDEETVR3	11084.4	9219.31	8557.57
P25113	P25113	PGAM1_RAT	Pgam1	Phosphoglycerate mutase 1	1	NLKPIKPMQFLGDEETVR	NLKPIKPMQFLGDEETVR	4	NLKPIKPMQFLGDEETVR4	12846.4	11051.9	11275.3
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	NLKPLACSSFSK	NLKPLAC(UniMod:4)SSFSK	3	NLKPLAC(UniMod:4)SSFSK3	13406	15403.4	16788.6
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	NLLADVETFVADTLK	NLLADVETFVADTLK	3	NLLADVETFVADTLK3			8007.62
P97521	P97521	MCAT_RAT	Slc25a20	Mitochondrial carnitine/acylcarnitine carrier protein	1	NLLAGGFGGVCLVFVGHPLDTVK	NLLAGGFGGVC(UniMod:4)LVFVGHPLDTVK	3	NLLAGGFGGVC(UniMod:4)LVFVGHPLDTVK3	55706.6	51059.7	45882.7
D3ZXK7	D3ZXK7	RN123_RAT	Rnf123	E3 ubiquitin-protein ligase RNF123	1	NLLAPYEQRPWAQTNWILVR	NLLAPYEQRPWAQTNWILVR	3	NLLAPYEQRPWAQTNWILVR3	18730	23186.5	25144.4
Q8CGZ2	Q8CGZ2	ADIP_RAT	Ssx2ip	Afadin- and alpha-actinin-binding protein	1	NLLAQESVETQNLK	NLLAQESVETQNLK	2	NLLAQESVETQNLK2	6030.65	3496.83	7471.63
G3V6R4	G3V6R4	G3V6R4_RAT	Lrrc1	Leucine rich repeat containing 1	1	NLLCLDVSENRLER	NLLC(UniMod:4)LDVSENRLER	3	NLLC(UniMod:4)LDVSENRLER3	7685.63	11131.7	6457
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	NLLDAVDQAK	NLLDAVDQAK	2	NLLDAVDQAK2	137689	142727	147352
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	NLLDGEMEHSAALR	NLLDGEMEHSAALR	2	NLLDGEMEHSAALR2	1710.19		
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	NLLDGEMEHSAALR	NLLDGEMEHSAALR	3	NLLDGEMEHSAALR3	61125.7	43697.9	56746
P63329	P63329	PP2BA_RAT	Ppp3ca	Protein phosphatase 3 catalytic subunit alpha	1	NLLDIDAPVTVCGDIHGQFFDLMK	NLLDIDAPVTVC(UniMod:4)GDIHGQFFDLMK	3	NLLDIDAPVTVC(UniMod:4)GDIHGQFFDLMK3		27850.6	18060.3
A0A8I6AE91	A0A8I6AE91	A0A8I6AE91_RAT	Gga2	Golgi associated, gamma adaptin ear containing, ARF binding protein 2	1	NLLDLFSPQPSPGPLNYVPQK	NLLDLFSPQPSPGPLNYVPQK	3	NLLDLFSPQPSPGPLNYVPQK3	5648.04	10141.7	11841.1
P35053	P35053	GPC1_RAT	Gpc1	Glypican-1	1	NLLDSMVLITDK	NLLDSMVLITDK	2	NLLDSMVLITDK2	7968.96	4519.94	6525.45
O35346	O35346	FAK1_RAT	Ptk2	Focal adhesion kinase 1	1	NLLDVIDQAR	NLLDVIDQAR	2	NLLDVIDQAR2	23402.8	15143.3	20134.1
B0BN56	B0BN56	RT31_RAT	Mrps31	Small ribosomal subunit protein mS31	1	NLLDVIK	NLLDVIK	1	NLLDVIK1	152965	177882	150591
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	NLLEALEQR	NLLEALEQR	2	NLLEALEQR2	60621.1	64936.4	49721.4
A0A8I5ZUS1	A0A8I5ZUS1	A0A8I5ZUS1_RAT	Map3k4	Mitogen activated protein kinase kinase kinase 4	1	NLLEEEWNFTK	NLLEEEWNFTK	2	NLLEEEWNFTK2	1840.83	4572.68	1671.05
A0A8I5ZP83	D4A9Z8;A0A8I5ZP83	A0A8I5ZP83_RAT	Chmp4b	Charged multivesicular body protein 4B	0	NLLEISGPETVPLPNVPSVALPSK	NLLEISGPETVPLPNVPSVALPSK	3	NLLEISGPETVPLPNVPSVALPSK3		4201.94	
A0A8I5ZP83	D4A9Z8;A0A8I5ZP83	A0A8I5ZP83_RAT	Chmp4b	Charged multivesicular body protein 4B	0	NLLEISGPETVPLPNVPSVALPSKPAK	NLLEISGPETVPLPNVPSVALPSKPAK	3	NLLEISGPETVPLPNVPSVALPSKPAK3	136642	154583	157700
A0A8I5ZP83	D4A9Z8;A0A8I5ZP83	A0A8I5ZP83_RAT	Chmp4b	Charged multivesicular body protein 4B	0	NLLEISGPETVPLPNVPSVALPSKPAK	NLLEISGPETVPLPNVPSVALPSKPAK	4	NLLEISGPETVPLPNVPSVALPSKPAK4	26838.3	25075.3	31340.9
A0A8I5ZP83	D4A9Z8;A0A8I5ZP83	A0A8I5ZP83_RAT	Chmp4b	Charged multivesicular body protein 4B	0	NLLEISGPETVPLPNVPSVALPSKPAKK	NLLEISGPETVPLPNVPSVALPSKPAKK	3	NLLEISGPETVPLPNVPSVALPSKPAKK3	6218.27	11477.4	5434.25
A0A8I5ZP83	D4A9Z8;A0A8I5ZP83	A0A8I5ZP83_RAT	Chmp4b	Charged multivesicular body protein 4B	0	NLLEISGPETVPLPNVPSVALPSKPAKK	NLLEISGPETVPLPNVPSVALPSKPAKK	4	NLLEISGPETVPLPNVPSVALPSKPAKK4	80720.2	74902	89923.7
Q5XIE8	Q5XIE8	ITM2B_RAT	Itm2b	Integral membrane protein 2B	1	NLLELLINIK	NLLELLINIK	2	NLLELLINIK2	10986.9		6687.71
D3ZBX9	D3ZBX9	D3ZBX9_RAT	Ccdc92	Coiled-coil domain containing 92	1	NLLFLQR	NLLFLQR	2	NLLFLQR2	50723.8	11898.9	36383
A0A0G2KB61	A0A0G2KB61;F1M5H6	A0A0G2KB61_RAT	Ppp1r13b	Protein phosphatase 1, regulatory subunit 13B	0	NLLGLYPR	NLLGLYPR	2	NLLGLYPR2	18656.1	18712.8	15981.4
F7FMS0	F7FMS0	F7FMS0_RAT	Mst1	Macrophage stimulating 1	1	NLLHPVVPGPWQEDVADAEECAR	NLLHPVVPGPWQEDVADAEEC(UniMod:4)AR	3	NLLHPVVPGPWQEDVADAEEC(UniMod:4)AR3	15382	9799.36	20265.5
Q9WVJ4	Q9WVJ4	SYJ2B_RAT	Synj2bp	Synaptojanin-2-binding protein	1	NLLHQDAVDLFR	NLLHQDAVDLFR	2	NLLHQDAVDLFR2	2557.2		1621.9
Q9WVJ4	Q9WVJ4	SYJ2B_RAT	Synj2bp	Synaptojanin-2-binding protein	1	NLLHQDAVDLFR	NLLHQDAVDLFR	3	NLLHQDAVDLFR3	26732.8	28939.7	26211.7
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	NLLHVTDTGVGMTR	NLLHVTDTGVGMTR	2	NLLHVTDTGVGMTR2	730835	711029	618511
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	NLLHVTDTGVGMTR	NLLHVTDTGVGMTR	3	NLLHVTDTGVGMTR3	5.29381e+06	6.06476e+06	5.90253e+06
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	NLLHVTDTGVGMTREELVK	NLLHVTDTGVGMTREELVK	3	NLLHVTDTGVGMTREELVK3	125251	182956	186557
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	NLLHVTDTGVGMTREELVK	NLLHVTDTGVGMTREELVK	4	NLLHVTDTGVGMTREELVK4	372150	587885	679716
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	NLLIFEVQQPFLFLLWDQR	NLLIFEVQQPFLFLLWDQR	3	NLLIFEVQQPFLFLLWDQR3		144766	118718
D3ZER6	D3ZER6	D3ZER6_RAT	Tnpo2	Transportin 2	1	NLLILYDAIGTLADSVGHHLNQPEYIQK	NLLILYDAIGTLADSVGHHLNQPEYIQK	4	NLLILYDAIGTLADSVGHHLNQPEYIQK4	9476.4	16518.3	13181.4
F1MAA4	F1MAA4	F1MAA4_RAT	Atp13a2	ATPase cation transporting 13A2	1	NLLKPQTTPVIQTLR	NLLKPQTTPVIQTLR	3	NLLKPQTTPVIQTLR3	9794.76	10162.7	10168
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	NLLLAFR	NLLLAFR	2	NLLLAFR2	6998.99	8711.47	4025.4
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	NLLLAGAK	NLLLAGAK	2	NLLLAGAK2	75074.8	79887.7	78506.1
Q4V794	Q4V794	Q4V794_RAT	Vps37a	VPS37A subunit of ESCRT-I	1	NLLLEHSLETK	NLLLEHSLETK	2	NLLLEHSLETK2	8619.04	5355.06	5549.13
Q4V794	Q4V794	Q4V794_RAT	Vps37a	VPS37A subunit of ESCRT-I	1	NLLLEHSLETK	NLLLEHSLETK	3	NLLLEHSLETK3	10439.9	8280.57	7926.49
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	NLLLLANSTEEQQK	NLLLLANSTEEQQK	2	NLLLLANSTEEQQK2	194503	189535	186266
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	NLLLSER	NLLLSER	2	NLLLSER2	77941.1	63818.8	66694.6
P0C5W1	P0C5W1	MAP1S_RAT	Map1s	Microtubule-associated protein 1S	1	NLLMDPAPHK	NLLMDPAPHK	2	NLLMDPAPHK2	5810.99	1930.43	9182.08
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	NLLMVHGAWNYNR	NLLMVHGAWNYNR	3	NLLMVHGAWNYNR3	48726.4	38714.1	58489.7
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	NLLPDTEYK	NLLPDTEYK	2	NLLPDTEYK2	80347.4	68662.1	78978.6
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	NLLPSSDPVVMEMASK	NLLPSSDPVVMEMASK	2	NLLPSSDPVVMEMASK2	34295	32957.8	38996
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	NLLPYSIR	NLLPYSIR	2	NLLPYSIR2	12529.2	15594.3	32250.2
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	NLLQLSPETK	NLLQLSPETK	2	NLLQLSPETK2	44325.1	47065.9	25351.5
A0A0G2JUH8	A0A0G2JUH8	A0A0G2JUH8_RAT	Snx13	Sorting nexin 13	1	NLLQQLIR	NLLQQLIR	2	NLLQQLIR2	3530.65	4108.31	5799.9
P68182	P68182;P27791	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	0	NLLQVDLTK	NLLQVDLTK	2	NLLQVDLTK2	971329	1.0109e+06	826813
P68182	P68182;P27791	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	0	NLLQVDLTKR	NLLQVDLTKR	2	NLLQVDLTKR2	13137	11125.5	10945.2
P68182	P68182;P27791	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	0	NLLQVDLTKR	NLLQVDLTKR	3	NLLQVDLTKR3	46889	46122.4	43548.9
D3ZKE1	D3ZKE1	D3ZKE1_RAT	Uvrag	UV radiation resistance associated	1	NLLQVDQNCVR	NLLQVDQNC(UniMod:4)VR	2	NLLQVDQNC(UniMod:4)VR2	15018.3	13920.8	21413.5
Q5M890	Q5M890	Q5M890_RAT	Apon	Apolipoprotein N	1	NLLSMAPLPPVAPLSESLSLLALR	NLLSMAPLPPVAPLSESLSLLALR	3	NLLSMAPLPPVAPLSESLSLLALR3		45086.9	52746.9
P62260	Q5EBB0;P35213;P62260;P63102;P68255;P61983;P68511;G3V9A3	1433E_RAT	Ywhae	14-3-3 protein epsilon	0	NLLSVAYK	NLLSVAYK	1	NLLSVAYK1	503550	450978	427882
P62260	Q5EBB0;P35213;P62260;P63102;P68255;P61983;P68511;G3V9A3	1433E_RAT	Ywhae	14-3-3 protein epsilon	0	NLLSVAYK	NLLSVAYK	2	NLLSVAYK2	161861	150532	135511
P63102	P35213;P63102;P61983;P68511	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	0	NLLSVAYKNVVGAR	NLLSVAYKNVVGAR	3	NLLSVAYKNVVGAR3	3358.04	10829.9	12455.4
D3ZHR2	D3ZHR2	ABCD1_RAT	Abcd1	ATP-binding cassette sub-family D member 1	1	NLLTAAADATER	NLLTAAADATER	2	NLLTAAADATER2	15761.6	14154.8	12866.2
B2RYF6	B2RYF6	B2RYF6_RAT	Clptm1	CLPTM1 regulator of GABA type A receptor forward trafficking	1	NLLTGETEADPEMIK	NLLTGETEADPEMIK	2	NLLTGETEADPEMIK2	15520.8	17178.3	17776
Q6AXR4	Q6AXR4	HEXB_RAT	Hexb	Beta-hexosaminidase subunit beta	1	NLLTPCFIQK	NLLTPC(UniMod:4)FIQK	2	NLLTPC(UniMod:4)FIQK2	16402	17492	17812.2
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	NLLVSVQSR	NLLVSVQSR	2	NLLVSVQSR2	35149.9	24660	29030.9
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	NLLYIYPQSLNFANR	NLLYIYPQSLNFANR	2	NLLYIYPQSLNFANR2	56815.7	51756.4	63016.9
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	NLLYIYPQSLNFANR	NLLYIYPQSLNFANR	3	NLLYIYPQSLNFANR3	1724.19	7724.92	6517.35
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	NLLYSSQSEAVLYPVCHVR	NLLYSSQSEAVLYPVC(UniMod:4)HVR	3	NLLYSSQSEAVLYPVC(UniMod:4)HVR3	21924.7	15673.9	19870.7
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	NLLYVYPQR	NLLYVYPQR	2	NLLYVYPQR2	119050	117478	143029
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	NLMEDFQK	NLMEDFQK	2	NLMEDFQK2	41281.6	36372.6	49025.2
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	NLMEIVK	NLMEIVK	2	NLMEIVK2	111049	135107	123394
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	NLMEIVKK	NLMEIVKK	2	NLMEIVKK2	34680.6	31179.1	30896.2
A0A8I6AUH0	A0A8I6AUH0	A0A8I6AUH0_RAT	Camk1d	Calcium/calmodulin-dependent protein kinase ID	1	NLMEKDPNK	NLMEKDPNK	2	NLMEKDPNK2			4152.84
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	NLMESLAQGPEEPK	NLMESLAQGPEEPK	2	NLMESLAQGPEEPK2	13401.6	13371.4	13869
F1LPV0	F1LPV0	F1LPV0_RAT	Nars1	asparagine--tRNA ligase	1	NLMFLVLR	NLMFLVLR	2	NLMFLVLR2	23980.6	14382.3	19228
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	NLMFVDIPIVDHQK	NLMFVDIPIVDHQK	2	NLMFVDIPIVDHQK2	179957	176829	174676
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	NLMFVDIPIVDHQK	NLMFVDIPIVDHQK	3	NLMFVDIPIVDHQK3	1.27328e+06	1.52087e+06	1.56332e+06
Q6AYP5	Q6AYP5	CADM1_RAT	Cadm1	Cell adhesion molecule 1	1	NLMIDIQK	NLMIDIQK	2	NLMIDIQK2	109913	113871	92756.5
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	NLMNTLHNLHQQLAK	NLMNTLHNLHQQLAK	3	NLMNTLHNLHQQLAK3	18809.1	9161.04	12178
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	NLMNVLMNESPDPEPDCDALAVK	NLMNVLMNESPDPEPDC(UniMod:4)DALAVK	3	NLMNVLMNESPDPEPDC(UniMod:4)DALAVK3	16818.2	16481.5	21678.3
A4V8B4	A4V8B4	SAV1_RAT	Sav1	Protein salvador homolog 1	1	NLMPSFIR	NLMPSFIR	2	NLMPSFIR2	84522.2	115736	121845
Q9EQP5	Q9EQP5	PRELP_RAT	Prelp	Prolargin	1	NLMQLNLAHNILR	NLMQLNLAHNILR	3	NLMQLNLAHNILR3	5559.09	6854.45	4115.48
G3V7P1	G3V7P1	STX12_RAT	Stx12	Syntaxin-12	1	NLMSQLGTK	NLMSQLGTK	2	NLMSQLGTK2	116731	115047	142456
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	NLMSSTEYQIAVFAVSAHTASEGLR	NLMSSTEYQIAVFAVSAHTASEGLR	3	NLMSSTEYQIAVFAVSAHTASEGLR3	11756	16181.3	13521.3
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	NLMWYGVLGTR	NLMWYGVLGTR	2	NLMWYGVLGTR2	237553	254941	231681
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	NLNAIVQK	NLNAIVQK	1	NLNAIVQK1	20878.6	17954.7	23194.1
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	NLNAIVQK	NLNAIVQK	2	NLNAIVQK2	1.02853e+06	887278	929113
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	NLNAPVQPFEDPEHMK	NLNAPVQPFEDPEHMK	2	NLNAPVQPFEDPEHMK2	24127.2	30116.1	22659.2
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	NLNAPVQPFEDPEHMK	NLNAPVQPFEDPEHMK	3	NLNAPVQPFEDPEHMK3	125695	181651	104046
Q5FVL6	Q5FVL6	TSN13_RAT	Tspan13	Tetraspanin-13	1	NLNCCGFR	NLNC(UniMod:4)C(UniMod:4)GFR	2	NLNC(UniMod:4)C(UniMod:4)GFR2	94843.9	83729.9	98680.7
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	NLNEDDTSLVFSK	NLNEDDTSLVFSK	2	NLNEDDTSLVFSK2	19908.5	13193.5	10829.7
P24155	P24155	THOP1_RAT	Thop1	Thimet oligopeptidase	1	NLNEDTTFLPFTR	NLNEDTTFLPFTR	2	NLNEDTTFLPFTR2	2479.28	5551.51	6021.8
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	NLNEQLLPK	NLNEQLLPK	2	NLNEQLLPK2	39379.5	29424.9	25476.4
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	NLNGTLHELLR	NLNGTLHELLR	3	NLNGTLHELLR3	13760.7	9649.78	13583.6
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	NLNHVSYGR	NLNHVSYGR	2	NLNHVSYGR2	13960	12687.3	11861.5
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	NLNLEEK	NLNLEEK	1	NLNLEEK1	5491.56	2592.44	
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	NLNLEEK	NLNLEEK	2	NLNLEEK2	133846	125996	131409
A0A0G2JWA3	A0A0G2JWA3	A0A0G2JWA3_RAT	Xpo7	Exportin 7	1	NLNLNDESQHGLLMQLLK	NLNLNDESQHGLLMQLLK	3	NLNLNDESQHGLLMQLLK3	8533.64		5766.96
Q0PMD2	Q0PMD2	ANTR1_RAT	Antxr1	Anthrax toxin receptor 1	1	NLNNNMR	NLNNNMR	2	NLNNNMR2		51648.7	
D3ZN39	D3ZN39	D3ZN39_RAT	Usp8	ubiquitinyl hydrolase 1	1	NLNPVFGGSGPALTGLR	NLNPVFGGSGPALTGLR	2	NLNPVFGGSGPALTGLR2	4030.85		8414
D4ABL6	D4ABL6	MCTP1_RAT	Mctp1	Multiple C2 and transmembrane domain-containing protein 1	1	NLNPVWEEK	NLNPVWEEK	2	NLNPVWEEK2	3874.08	6323.46	8837.16
Q7TP54	P02793;A0A8I6GIG4;A0A8I5ZY31;M0R597;M0R5T8;Q7TP54;F1M5T1;M0R6L9	RIPR2_RAT	Ripor2	Rho family-interacting cell polarization regulator 2	0	NLNQALLDLHALGSAR	NLNQALLDLHALGSAR	3	NLNQALLDLHALGSAR3	38813.7	24209.1	23449.7
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	NLNQHSGSYEVIVAEGESLLLSVPPGEEKK	NLNQHSGSYEVIVAEGESLLLSVPPGEEKK	4	NLNQHSGSYEVIVAEGESLLLSVPPGEEKK4	18547.7	16637	17611.3
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	NLNSCLQQLK	NLNSC(UniMod:4)LQQLK	2	NLNSC(UniMod:4)LQQLK2	9744.65	12137.7	7797.47
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	NLNSEIDNILVNLR	NLNSEIDNILVNLR	2	NLNSEIDNILVNLR2	12102.3	10061.5	14548.5
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	NLNSEIDNILVNLR	NLNSEIDNILVNLR	3	NLNSEIDNILVNLR3	67359.6	23978.6	60106.5
M0RBL7	M0RBL7	M0RBL7_RAT	Tcaf2c	Protein FAM115C-like	1	NLNSLLLK	NLNSLLLK	2	NLNSLLLK2	18785.4	6842.61	14186.1
M0R9J2	M0R9J2	M0R9J2_RAT	Pigg	GPI ethanolamine phosphate transferase 2	1	NLNSPVLLEDNVIR	NLNSPVLLEDNVIR	2	NLNSPVLLEDNVIR2	2817.2	4470.32	1529.86
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	NLNSWDPVR	NLNSWDPVR	2	NLNSWDPVR2	253093	235622	259418
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	NLNTLCWAIGSISGAMHEEDEKR	NLNTLC(UniMod:4)WAIGSISGAMHEEDEKR	4	NLNTLC(UniMod:4)WAIGSISGAMHEEDEKR4	10722.5	12616.6	10760.7
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	NLNTLLLNNNQIK	NLNTLLLNNNQIK	2	NLNTLLLNNNQIK2	30980.3	28452.8	24196.1
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	NLPATDAIQR	NLPATDAIQR	2	NLPATDAIQR2	2.03215e+06	1.61687e+06	1.43843e+06
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	NLPDQCTPNPCDK	NLPDQC(UniMod:4)TPNPC(UniMod:4)DK	2	NLPDQC(UniMod:4)TPNPC(UniMod:4)DK2	199521	189874	233392
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	NLPDQCTPNPCDKK	NLPDQC(UniMod:4)TPNPC(UniMod:4)DKK	3	NLPDQC(UniMod:4)TPNPC(UniMod:4)DKK3	31610.1	45433.7	
B3DMA2	B3DMA2	ACD11_RAT	Acad11	Acyl-CoA dehydrogenase family member 11	1	NLPDSDNEECLVHGDFK	NLPDSDNEEC(UniMod:4)LVHGDFK	3	NLPDSDNEEC(UniMod:4)LVHGDFK3	25221.2	20986.8	28616.6
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	NLPECSQK	NLPEC(UniMod:4)SQK	2	NLPEC(UniMod:4)SQK2	52880.2	65007.6	70219.8
P51111	P51111	HD_RAT	Htt	Huntingtin	1	NLPEDTFSR	NLPEDTFSR	2	NLPEDTFSR2	60486.9	58372.6	41575.7
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	NLPENENNETGLENVINK	NLPENENNETGLENVINK	3	NLPENENNETGLENVINK3	8056.37	9936.47	6332.92
B5DF93	B5DF93	PATL1_RAT	Patl1	Protein PAT1 homolog 1	1	NLPFLIK	NLPFLIK	2	NLPFLIK2	26529.8	36681.6	27138.6
P70587	A0A8I6AE43;P70587	LRRC7_RAT	Lrrc7	Leucine-rich repeat-containing protein 7	0	NLPFSFTK	NLPFSFTK	1	NLPFSFTK1	17699.9	28475	28649.6
P70587	A0A8I6AE43;P70587	LRRC7_RAT	Lrrc7	Leucine-rich repeat-containing protein 7	0	NLPFSFTK	NLPFSFTK	2	NLPFSFTK2	940550	869448	964480
P80432	P80432;A0A8I6ADD5;A0A8I6B572	COX7C_RAT	Cox7c	Cytochrome c oxidase subunit 7C, mitochondrial	0	NLPFSVENK	NLPFSVENK	2	NLPFSVENK2	13495.6	11164.2	11613
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	NLPFTPILASVNR	NLPFTPILASVNR	2	NLPFTPILASVNR2	241249	269265	268475
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	NLPFTPILASVNR	NLPFTPILASVNR	3	NLPFTPILASVNR3	13648.1	15895	22043.2
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	NLPGLVQEGEPFSEEATLFTK	NLPGLVQEGEPFSEEATLFTK	3	NLPGLVQEGEPFSEEATLFTK3	13869.3	12881	13346
O35370	O35370	O35370_RAT	Thbd	Thrombomodulin	1	NLPGSYECICGPDTALAGQISK	NLPGSYEC(UniMod:4)IC(UniMod:4)GPDTALAGQISK	3	NLPGSYEC(UniMod:4)IC(UniMod:4)GPDTALAGQISK3	21311.1	31751.6	38067.5
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	NLPIYSEEIVDMYK	NLPIYSEEIVDMYK	2	NLPIYSEEIVDMYK2	37126.4	28906	32466.1
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	NLPIYSEEIVDMYK	NLPIYSEEIVDMYK	3	NLPIYSEEIVDMYK3	498933	710416	683798
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	NLPIYSEEIVDMYKGK	NLPIYSEEIVDMYKGK	3	NLPIYSEEIVDMYKGK3	25811.4	18772.8	16407.3
P0C8E4	P0C8E4	M3K7_RAT	Map3k7	Mitogen-activated protein kinase kinase kinase 7	1	NLPKPIESLMTR	NLPKPIESLMTR	3	NLPKPIESLMTR3	26119.3	33397.5	32887.8
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	NLPLALSSLVQLR	NLPLALSSLVQLR	2	NLPLALSSLVQLR2	25623.5	34677.3	14976.9
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	NLPLNGATVSLAWVPQTR	NLPLNGATVSLAWVPQTR	2	NLPLNGATVSLAWVPQTR2	7292.99	9729.34	
P61980	P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	NLPLPPPPPPR	NLPLPPPPPPR	2	NLPLPPPPPPR2	74452.6	27175	83811.1
A0A8I5ZU93	A0A8I5ZU93	A0A8I5ZU93_RAT	Cops7a	COP9 signalosome subunit 7A	1	NLPPLTEAQK	NLPPLTEAQK	2	NLPPLTEAQK2	88469.7	80079.5	106078
D3ZYS7	D3ZYS7	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	1	NLPPSGAVPVTGTPPHVVK	NLPPSGAVPVTGTPPHVVK	3	NLPPSGAVPVTGTPPHVVK3	21982.6	20186.3	18657.8
D3ZES7	A0A8I6AGW9;D3ZWP6;D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	0	NLPQPQSGQR	NLPQPQSGQR	2	NLPQPQSGQR2	111382	129008	81624.9
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	NLPSYPGPNK	NLPSYPGPNK	2	NLPSYPGPNK2	918217	999413	930151
Q4KLJ8	Q4KLJ8	PDCL3_RAT	Pdcl3	Phosducin-like protein 3	1	NLPTVFVYR	NLPTVFVYR	2	NLPTVFVYR2	267878	288916	297879
P04762	P04762	CATA_RAT	Cat	Catalase	1	NLPVEEAGR	NLPVEEAGR	2	NLPVEEAGR2	79057.8	67334.8	93551
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	NLPVPVYLRPLDEK	NLPVPVYLRPLDEK	2	NLPVPVYLRPLDEK2	6758.68	16344.3	13270.3
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	NLPVPVYLRPLDEK	NLPVPVYLRPLDEK	3	NLPVPVYLRPLDEK3	75582.2	97041	88656.9
F1M8V2	F1M8V2	F1M8V2_RAT	Ube4b	Ubiquitin conjugation factor E4	1	NLPYGFIQELVR	NLPYGFIQELVR	2	NLPYGFIQELVR2	14513.2	28374.9	19324
A0A8I5Y9E9	A0A8I5Y9E9	A0A8I5Y9E9_RAT	Trem2	Triggering receptor expressed on myeloid cells 2	1	NLQAGDAGLYQCQSLR	NLQAGDAGLYQC(UniMod:4)QSLR	2	NLQAGDAGLYQC(UniMod:4)QSLR2	60893	66270.5	59725.4
A0A8I5Y9E9	A0A8I5Y9E9	A0A8I5Y9E9_RAT	Trem2	Triggering receptor expressed on myeloid cells 2	1	NLQAGDAGLYQCQSLR	NLQAGDAGLYQC(UniMod:4)QSLR	3	NLQAGDAGLYQC(UniMod:4)QSLR3	33432.4	30217.7	34175.3
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	NLQAHYEDFLQDSHDSALFSVADR	NLQAHYEDFLQDSHDSALFSVADR	3	NLQAHYEDFLQDSHDSALFSVADR3	2111.1	2759.13	2961.89
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	NLQAHYEDFLQDSHDSALFSVADR	NLQAHYEDFLQDSHDSALFSVADR	4	NLQAHYEDFLQDSHDSALFSVADR4	35322.7	36954.3	27839.7
Q63616	Q63616	VP33B_RAT	Vps33b	Vacuolar protein sorting-associated protein 33B	1	NLQAQYDR	NLQAQYDR	2	NLQAQYDR2	7428.94	7785.79	7457.77
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	NLQDAMQVCR	NLQDAMQVC(UniMod:4)R	2	NLQDAMQVC(UniMod:4)R2	165635	165664	162288
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	NLQDLVR	NLQDLVR	2	NLQDLVR2	387085	457747	437604
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	NLQDSIK	NLQDSIK	2	NLQDSIK2	34312.3	38100.2	39740.8
P31000	P31000;P21807	VIME_RAT	Vim	Vimentin	0	NLQEAEEWYK	NLQEAEEWYK	2	NLQEAEEWYK2	6154.44		10351.4
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	NLQEALGLPTGVGNK	NLQEALGLPTGVGNK	2	NLQEALGLPTGVGNK2	1.1368e+06	1.08708e+06	1.24513e+06
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	NLQEALGLPTGVGNK	NLQEALGLPTGVGNK	3	NLQEALGLPTGVGNK3	320133	238105	269605
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	NLQEALGLPTGVGNKDNLAENSEGK	NLQEALGLPTGVGNKDNLAENSEGK	3	NLQEALGLPTGVGNKDNLAENSEGK3	18772.9	19044.9	24409.2
Q5PQL2	Q5PQL2	CNOT9_RAT	Cnot9	CCR4-NOT transcription complex subunit 9	1	NLQEGQVTDPR	NLQEGQVTDPR	2	NLQEGQVTDPR2	3217.21	4706.9	
D3ZJF9	D3ZJF9	D3ZJF9_RAT	Gla	Alpha-galactosidase	1	NLQEIGGPR	NLQEIGGPR	2	NLQEIGGPR2	43435	33453.6	41937.8
G3V6K6	G3V6K6	G3V6K6_RAT	Egfr	Receptor protein-tyrosine kinase	1	NLQEILIGAVR	NLQEILIGAVR	2	NLQEILIGAVR2	15562.8	18482	12754.5
Q66HC5	Q66HC5	NUP93_RAT	Nup93	Nuclear pore complex protein Nup93	1	NLQEIQQAGER	NLQEIQQAGER	2	NLQEIQQAGER2	7630.72	12647.6	9419.28
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	NLQELQK	NLQELQK	2	NLQELQK2	33838.1	36193	37602.3
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	NLQEVLGEEK	NLQEVLGEEK	2	NLQEVLGEEK2	9588.5	5287.68	13887.2
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	NLQGFLEQPR	NLQGFLEQPR	2	NLQGFLEQPR2	49630.1	56261.2	55692.5
P01355	P01355	CCKN_RAT	Cck	Cholecystokinin	1	NLQGLDPSHR	NLQGLDPSHR	2	NLQGLDPSHR2	204363	226813	220733
D4A7R3	D4A7R3	D4A7R3_RAT	Nup205	Nucleoporin 205	1	NLQGQTVCNVK	NLQGQTVC(UniMod:4)NVK	2	NLQGQTVC(UniMod:4)NVK2	2761.42	4536.66	4940.32
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	NLQHCDGFQPISTSVSPLALIK	NLQHC(UniMod:4)DGFQPISTSVSPLALIK	3	NLQHC(UniMod:4)DGFQPISTSVSPLALIK3	3.51843e+06	4.13273e+06	4.03472e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	NLQHCDGFQPISTSVSPLALIK	NLQHC(UniMod:4)DGFQPISTSVSPLALIK	4	NLQHC(UniMod:4)DGFQPISTSVSPLALIK4	13233.1	23737.5	20632.2
Q6PCU8	Q6PCU8	NDUV3_RAT	Ndufv3	NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial	1	NLQHHEYNAFTFLDLNLDLSK	NLQHHEYNAFTFLDLNLDLSK	3	NLQHHEYNAFTFLDLNLDLSK3	8967.56	12042	8349.33
Q6PCU8	Q6PCU8	NDUV3_RAT	Ndufv3	NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial	1	NLQHHEYNAFTFLDLNLDLSK	NLQHHEYNAFTFLDLNLDLSK	4	NLQHHEYNAFTFLDLNLDLSK4	6201.97	8791.16	8436.17
A0A8I5Y4X4	A0A8I5Y4X4	A0A8I5Y4X4_RAT	Nub1	Negative regulator of ubiquitin-like proteins 1	1	NLQLEEEEQNEAEQK	NLQLEEEEQNEAEQK	2	NLQLEEEEQNEAEQK2	3025.63	3147.21	2159.88
A0A8I5Y4X4	A0A8I5Y4X4	A0A8I5Y4X4_RAT	Nub1	Negative regulator of ubiquitin-like proteins 1	1	NLQLEEEEQNEAEQKEK	NLQLEEEEQNEAEQKEK	3	NLQLEEEEQNEAEQKEK3	937.882	7460.45	9165.76
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	NLQLLGATAIEDK	NLQLLGATAIEDK	2	NLQLLGATAIEDK2	66447.6	65121.7	51355.5
Q6P9U8	Q6P9U8	EIF3H_RAT	Eif3h	Eukaryotic translation initiation factor 3 subunit H	1	NLQLLMDR	NLQLLMDR	2	NLQLLMDR2	94961.7	60733.5	81173.4
Q6P9U8	Q6P9U8	EIF3H_RAT	Eif3h	Eukaryotic translation initiation factor 3 subunit H	1	NLQLLMDRVDEMSQDIIK	NLQLLMDRVDEMSQDIIK	3	NLQLLMDRVDEMSQDIIK3	94708.2	71538.4	151886
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	NLQMWEEMK	NLQMWEEMK	2	NLQMWEEMK2	32539.8	28287	27282.8
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	NLQMWEEMKR	NLQMWEEMKR	3	NLQMWEEMKR3	11319.8	12324	12237.4
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	NLQNLLILTAIK	NLQNLLILTAIK	2	NLQNLLILTAIK2	88174.7	110077	102959
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	NLQNLLILTAIK	NLQNLLILTAIK	3	NLQNLLILTAIK3	17559.7	22350.1	26580.7
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	NLQPAIVK	NLQPAIVK	1	NLQPAIVK1	5.52872e+06	4.03752e+06	3.94153e+06
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	NLQPAIVK	NLQPAIVK	2	NLQPAIVK2	855221	636204	596453
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	NLQPGSEYTVTLMAVK	NLQPGSEYTVTLMAVK	2	NLQPGSEYTVTLMAVK2	714742	711505	685539
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	NLQPGSEYTVTLMAVK	NLQPGSEYTVTLMAVK	3	NLQPGSEYTVTLMAVK3	2.71587e+06	3.31236e+06	3.17454e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	NLQPGSEYTVTLMAVKGNQQSPK	NLQPGSEYTVTLMAVKGNQQSPK	3	NLQPGSEYTVTLMAVKGNQQSPK3	319243	275542	300932
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	NLQPQGDEDPGK	NLQPQGDEDPGK	2	NLQPQGDEDPGK2	94945.5	91916.4	93266.4
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	NLQPQGDEDPGKFK	NLQPQGDEDPGKFK	2	NLQPQGDEDPGKFK2	5125.62		4331.17
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	NLQPQGDEDPGKFK	NLQPQGDEDPGKFK	3	NLQPQGDEDPGKFK3	40182.6	30273.7	29140.2
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	NLQQQYLQMNQEITELRPLK	NLQQQYLQMNQEITELRPLK	3	NLQQQYLQMNQEITELRPLK3	13045.1	10077.8	9547
Q9WUF4	Q9WUF4	VAMP8_RAT	Vamp8	Vesicle-associated membrane protein 8	1	NLQSEVEGVK	NLQSEVEGVK	2	NLQSEVEGVK2	261588	260304	364030
P26051	P26051	CD44_RAT	Cd44	CD44 antigen	1	NLQSVDMK	NLQSVDMK	1	NLQSVDMK1	19185.8	18496.6	16884.3
P26051	P26051	CD44_RAT	Cd44	CD44 antigen	1	NLQSVDMK	NLQSVDMK	2	NLQSVDMK2	749539	752325	879016
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	NLQVEYEQLK	NLQVEYEQLK	2	NLQVEYEQLK2	113415	116380	117004
Q63556	Q63556	SPA3M_RAT	Serpina3m	Serine protease inhibitor A3M (Fragment)	1	NLQVLAEFQEK	NLQVLAEFQEK	2	NLQVLAEFQEK2	181806	139367	131879
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	NLQVQISSIHVR	NLQVQISSIHVR	2	NLQVQISSIHVR2	5953	3692.58	2371.27
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	NLQVQISSIHVR	NLQVQISSIHVR	3	NLQVQISSIHVR3	30339.1	30621.9	33305.5
P62828	Q8K586;P62828;Q66H11	RAN_RAT	Ran	GTP-binding nuclear protein Ran	0	NLQYYDISAK	NLQYYDISAK	2	NLQYYDISAK2	79001.5	61742	76000.4
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	NLRDDEGFIIR	NLRDDEGFIIR	3	NLRDDEGFIIR3	42702.2	53448.3	46221.9
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	NLRDVDEVSSLLR	NLRDVDEVSSLLR	3	NLRDVDEVSSLLR3	7584.91	9363.16	15779.9
P04897	P10824;P04897;P08753	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	0	NLREDGEK	NLREDGEK	2	NLREDGEK2			21381.2
A0A8I5ZUT2	A0A8I5ZUT2	A0A8I5ZUT2_RAT	Irgq	Immunity-related GTPase Q	1	NLRPGDSQNAAQAR	NLRPGDSQNAAQAR	2	NLRPGDSQNAAQAR2	1717.49		2509.78
A0A8I5ZUT2	A0A8I5ZUT2	A0A8I5ZUT2_RAT	Irgq	Immunity-related GTPase Q	1	NLRPGDSQNAAQAR	NLRPGDSQNAAQAR	3	NLRPGDSQNAAQAR3	8995.24	12423.7	5790.95
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	NLRPYTEYTVSLFAYVIGR	NLRPYTEYTVSLFAYVIGR	3	NLRPYTEYTVSLFAYVIGR3	14327.3	6135.99	5839.87
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	NLSADQWR	NLSADQWR	2	NLSADQWR2	203357	207982	211859
O55043	O55043	ARHG7_RAT	Arhgef7	Rho guanine nucleotide exchange factor 7	1	NLSAQCQEVR	NLSAQC(UniMod:4)QEVR	2	NLSAQC(UniMod:4)QEVR2	38007.3	37241	40818.1
Q66H12	Q66H12	NAGAB_RAT	Naga	Alpha-N-acetylgalactosaminidase	1	NLSDDASALVFFSR	NLSDDASALVFFSR	2	NLSDDASALVFFSR2	8427.96	8584.45	11141.8
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	NLSDLIDLVPSLCEDLLSSVDQPLK	NLSDLIDLVPSLC(UniMod:4)EDLLSSVDQPLK	3	NLSDLIDLVPSLC(UniMod:4)EDLLSSVDQPLK3	3148.47		
F1M086	F1M086	F1M086_RAT	Elp4	Elongator complex protein 4	1	NLSDTVVGLESFIGSER	NLSDTVVGLESFIGSER	2	NLSDTVVGLESFIGSER2	18232	9249.24	7860.32
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	NLSEFGLIQEK	NLSEFGLIQEK	2	NLSEFGLIQEK2	47474.4	53235	41986.8
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	NLSELIDR	NLSELIDR	2	NLSELIDR2	30534.1	33385.1	24458.9
D3ZRJ7	D3ZRJ7	D3ZRJ7_RAT	Lrrk1	non-specific serine/threonine protein kinase	1	NLSELYLGNNPGLR	NLSELYLGNNPGLR	2	NLSELYLGNNPGLR2	2378.66	1696.66	
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	NLSEPVMTYK	NLSEPVMTYK	2	NLSEPVMTYK2	78930.7	94282.1	102758
Q6P7S1	Q6P7S1	ASAH1_RAT	Asah1	Acid ceramidase	1	NLSFATIYDVLSTKPVLNK	NLSFATIYDVLSTKPVLNK	3	NLSFATIYDVLSTKPVLNK3	6345.31		4289.94
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	NLSGGVLMR	NLSGGVLMR	2	NLSGGVLMR2	38076.5	39370.2	37249.8
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	NLSGGYLVLYK	NLSGGYLVLYK	2	NLSGGYLVLYK2	14215	22062.8	15523.2
O08770	O08770	GPV_RAT	Gp5	Platelet glycoprotein V	1	NLSGLQTLGLTR	NLSGLQTLGLTR	2	NLSGLQTLGLTR2	4750.35	5581.49	4740.34
A0A8I6A822	A0A8I6A822	A0A8I6A822_RAT	Tm9sf3	Transmembrane 9 superfamily member	1	NLSGQPNFPCR	NLSGQPNFPC(UniMod:4)R	2	NLSGQPNFPC(UniMod:4)R2	232292	336199	242702
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	NLSHTQDEGNVK	NLSHTQDEGNVK	3	NLSHTQDEGNVK3			6666.51
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	NLSKPIAVQYK	NLSKPIAVQYK	3	NLSKPIAVQYK3	17242.1	23942.5	18609.9
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	NLSLAVSDCFWK	NLSLAVSDC(UniMod:4)FWK	2	NLSLAVSDC(UniMod:4)FWK2	37649.8	32431.6	27194.6
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	NLSLCER	NLSLC(UniMod:4)ER	2	NLSLC(UniMod:4)ER2	157478	169932	169153
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	NLSLEELQMR	NLSLEELQMR	2	NLSLEELQMR2	169172	164038	181014
F1M7L9	F1M7L9	PKP2_RAT	Pkp2	Plakophilin-2	1	NLSLQNEIAK	NLSLQNEIAK	2	NLSLQNEIAK2	14676.4	11309.5	8830.35
B3GNI6	B3GNI6	SEP11_RAT	Septin11	Septin-11	1	NLSLSGHVGFDSLPDQLVNK	NLSLSGHVGFDSLPDQLVNK	3	NLSLSGHVGFDSLPDQLVNK3	495762	442448	493600
Q6IN36	Q6IN36	WIPF1_RAT	Wipf1	WAS/WASL-interacting protein family member 1	1	NLSLTSPTPPLPSPGR	NLSLTSPTPPLPSPGR	2	NLSLTSPTPPLPSPGR2	279203	278586	279244
Q6IN36	Q6IN36	WIPF1_RAT	Wipf1	WAS/WASL-interacting protein family member 1	1	NLSLTSPTPPLPSPGR	NLSLTSPTPPLPSPGR	3	NLSLTSPTPPLPSPGR3	23968.4	18585	30283.5
M0R8V0	A0A8I6A3T8;M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	0	NLSPDKINLSTLK	NLSPDKINLSTLK	3	NLSPDKINLSTLK3	10696	15616.6	14023.2
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	NLSPGAVESDVR	NLSPGAVESDVR	2	NLSPGAVESDVR2	336892	419689	343821
P47824	P47824	P2RX1_RAT	P2rx1	P2X purinoceptor 1	1	NLSPGFNFR	NLSPGFNFR	2	NLSPGFNFR2	302622	300613	324628
A0A8I5ZV26	A0A8I5ZV26	A0A8I5ZV26_RAT	Stom	Stomatin	1	NLSQILSDR	NLSQILSDR	2	NLSQILSDR2	68408	70831.2	90820.2
A0A8I5ZV26	A0A8I5ZV26	A0A8I5ZV26_RAT	Stom	Stomatin	1	NLSQILSDREEIAHHMQSTLDDATDDWGIK	NLSQILSDREEIAHHMQSTLDDATDDWGIK	4	NLSQILSDREEIAHHMQSTLDDATDDWGIK4	117534	91472.7	97261.9
A0A8I5ZQZ1	A0A8I5ZQZ1	A0A8I5ZQZ1_RAT	Nufip2	Nuclear FMR1 interacting protein 2	1	NLSSDEATNPISR	NLSSDEATNPISR	2	NLSSDEATNPISR2	6395.89	4635.75	5138.74
P56571	P56571	ES1_RAT		ES1 protein homolog, mitochondrial	1	NLSTFAVDGK	NLSTFAVDGK	2	NLSTFAVDGK2	109677	106327	99525.1
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	NLSVLNAEAQK	NLSVLNAEAQK	2	NLSVLNAEAQK2	57147.9	65436.5	56180.2
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	NLSWEWYK	NLSWEWYK	2	NLSWEWYK2	45902.4	37820.5	38497.4
G3V7L4	G3V7L4	G3V7L4_RAT	Cdh16	Cadherin 16	1	NLSYEEAPDHK	NLSYEEAPDHK	2	NLSYEEAPDHK2	7355.17	10034.5	1658.49
G3V7L4	G3V7L4	G3V7L4_RAT	Cdh16	Cadherin 16	1	NLSYEEAPDHK	NLSYEEAPDHK	3	NLSYEEAPDHK3	41325.5	31651.2	43959.3
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	NLSYQVHR	NLSYQVHR	2	NLSYQVHR2	17438.6	11504.4	11174.5
F1M784	F1M784	F1M784_RAT	Pik3ap1	Phosphoinositide-3-kinase adaptor protein 1	1	NLTALLLTCPGALQAYSVANK	NLTALLLTC(UniMod:4)PGALQAYSVANK	3	NLTALLLTC(UniMod:4)PGALQAYSVANK3	5102.02	7948.48	11004.7
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	NLTAPPTLEK	NLTAPPTLEK	2	NLTAPPTLEK2	59644.2	68536.6	71107.1
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	NLTDAIAR	NLTDAIAR	2	NLTDAIAR2	84562.8	147838	81265.6
Q9ER24	Q9ER24	ATX10_RAT	Atxn10	Ataxin-10	1	NLTEDNSQNQDFIAK	NLTEDNSQNQDFIAK	2	NLTEDNSQNQDFIAK2	3596.99	3339.93	4131.83
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	NLTEENTEK	NLTEENTEK	2	NLTEENTEK2	126263	112326	
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	NLTEQNSYSNIPHEGK	NLTEQNSYSNIPHEGK	2	NLTEQNSYSNIPHEGK2	5108.36	6498.3	5597.28
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	NLTEQNSYSNIPHEGK	NLTEQNSYSNIPHEGK	3	NLTEQNSYSNIPHEGK3	78648.7	73765.5	86074.2
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	NLTEWFSR	NLTEWFSR	2	NLTEWFSR2	166689	214190	174034
A4GW50	A4GW50	A4GW50_RAT	Stk38l	Serine/threonine kinase 38 like	1	NLTHNPPSDFSFQNMNSK	NLTHNPPSDFSFQNMNSK	3	NLTHNPPSDFSFQNMNSK3	5206.24	5035.93	2622.15
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	NLTLATDK	NLTLATDK	2	NLTLATDK2		43729.1	53242.4
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	NLTNPNTVIILIGNK	NLTNPNTVIILIGNK	2	NLTNPNTVIILIGNK2	144587	109369	115574
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	NLTNPNTVIILIGNK	NLTNPNTVIILIGNK	3	NLTNPNTVIILIGNK3	78125	63598.7	62515.1
D3ZZJ7	D3ZZJ7	D3ZZJ7_RAT	Dcp1b	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	NLTQCEQLK	NLTQC(UniMod:4)EQLK	2	NLTQC(UniMod:4)EQLK2	12584	6217.37	12194
P29411	P29411	KAD3_RAT	Ak3	GTP:AMP phosphotransferase AK3, mitochondrial	1	NLTQCSWLLDGFPR	NLTQC(UniMod:4)SWLLDGFPR	2	NLTQC(UniMod:4)SWLLDGFPR2	18862.6	16301.2	15900.7
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	NLTQDEMQR	NLTQDEMQR	2	NLTQDEMQR2	162650	135917	169704
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	NLTSHDPMR	NLTSHDPMR	2	NLTSHDPMR2	17348.2	12873.7	10878.9
A0A8I6GBT2;M0R766	A0A8I6GBT2;M0R766	A0A8I6GBT2_RAT;M0R766_RAT	AABR07006081.1;Tvp23b	Golgi apparatus membrane protein TVP23 homolog	0	NLTSMATSYLGK	NLTSMATSYLGK	2	NLTSMATSYLGK2	35185	37756.1	34408.8
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	NLTVSNTR	NLTVSNTR	2	NLTVSNTR2	120275	137232	117588
Q5PPL3	Q5PPL3	NSDHL_RAT	Nsdhl	Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating	1	NLVDFTFVENVVHGHILAAEHLSR	NLVDFTFVENVVHGHILAAEHLSR	4	NLVDFTFVENVVHGHILAAEHLSR4	2591.84	7348.93	4342.31
P30427	P30427	PLEC_RAT	Plec	Plectin	1	NLVDNITGQR	NLVDNITGQR	2	NLVDNITGQR2	4744.82	8459.48	4646.82
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	NLVDSYVAIINK	NLVDSYVAIINK	2	NLVDSYVAIINK2	105414	79125.3	80017.5
A0A8I5ZS69	A0A8I5ZS69	A0A8I5ZS69_RAT	Snx6	Sorting nexin	1	NLVELAELELK	NLVELAELELK	2	NLVELAELELK2	94873	80826.1	70432.4
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	NLVENLFSNGHIK	NLVENLFSNGHIK	3	NLVENLFSNGHIK3	6868.15	6052.18	4055.93
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	NLVEQHIQDIVVHYTFNK	NLVEQHIQDIVVHYTFNK	3	NLVEQHIQDIVVHYTFNK3	71913.3	58347.6	43989.4
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	NLVEQHIQDIVVHYTFNK	NLVEQHIQDIVVHYTFNK	4	NLVEQHIQDIVVHYTFNK4	18051.8	21654.4	20465.1
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	NLVESELQR	NLVESELQR	2	NLVESELQR2	45158.5	45940.1	44483.5
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	NLVFVIDISGSMEGQK	NLVFVIDISGSMEGQK	2	NLVFVIDISGSMEGQK2	4.93548e+06	4.76099e+06	4.19648e+06
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	NLVFVIDISGSMEGQK	NLVFVIDISGSMEGQK	3	NLVFVIDISGSMEGQK3	583837	499807	499749
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	NLVFVIDISGSMEGQKVK	NLVFVIDISGSMEGQKVK	3	NLVFVIDISGSMEGQKVK3	12377.6	16097.2	6557.53
Q5PQX0	Q5PQX0	UXS1_RAT	Uxs1	UDP-glucuronic acid decarboxylase 1	1	NLVGSGSEIQFLSEAQDDPQK	NLVGSGSEIQFLSEAQDDPQK	3	NLVGSGSEIQFLSEAQDDPQK3	17295.9	13258.5	14625.4
A0A8I6AE91	A0A8I6AE91	A0A8I6AE91_RAT	Gga2	Golgi associated, gamma adaptin ear containing, ARF binding protein 2	1	NLVKEEQEK	NLVKEEQEK	2	NLVKEEQEK2	2431.78		1623.37
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	NLVLAGIK	NLVLAGIK	2	NLVLAGIK2	39565	54638.9	33763.2
P26342	P26342	TGBR3_RAT	Tgfbr3	Transforming growth factor beta receptor type 3	1	NLVLILK	NLVLILK	2	NLVLILK2	4969.83		2848.55
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	NLVNDDDAIVAASK	NLVNDDDAIVAASK	2	NLVNDDDAIVAASK2	24305.1	32918.9	21500.4
F1LQ09	F1LQ09	F1LQ09_RAT	Atl2	Atlastin GTPase 2	1	NLVPLLLAPENLVEK	NLVPLLLAPENLVEK	2	NLVPLLLAPENLVEK2	80154.5	73642.3	97447.3
F1LQ09	F1LQ09	F1LQ09_RAT	Atl2	Atlastin GTPase 2	1	NLVPLLLAPENLVEK	NLVPLLLAPENLVEK	3	NLVPLLLAPENLVEK3	12271.7	6268.2	12627.9
F1LQ09	F1LQ09	F1LQ09_RAT	Atl2	Atlastin GTPase 2	1	NLVPLLLAPENLVEKEISGSK	NLVPLLLAPENLVEKEISGSK	3	NLVPLLLAPENLVEKEISGSK3	3879.93	10197.6	8327.99
P68403	P68403	KPCB_RAT	Prkcb	Protein kinase C beta type	1	NLVPMDPNGLSDPYVK	NLVPMDPNGLSDPYVK	2	NLVPMDPNGLSDPYVK2	3909.81	4705.79	3686.58
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	NLVQDTR	NLVQDTR	2	NLVQDTR2	58031.9	73156.5	48898.9
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	NLVSDLSPDVK	NLVSDLSPDVK	2	NLVSDLSPDVK2	3.14418e+06	3.27696e+06	3.37038e+06
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	NLVSILHLLVSLAMHFR	NLVSILHLLVSLAMHFR	3	NLVSILHLLVSLAMHFR3		2313.01	
Q5XIB4	Q5XIB4	UFSP2_RAT	Ufsp2	Ufm1-specific protease 2	1	NLVTVLYPSGIPDDQLQAYR	NLVTVLYPSGIPDDQLQAYR	3	NLVTVLYPSGIPDDQLQAYR3	17644.2	10322.7	11138.8
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	NLVVDDEAATSLR	NLVVDDEAATSLR	2	NLVVDDEAATSLR2	89487.2	98493.2	76574.7
P07943	P07943;A0A8I6A068;A0A8I6ASF1	ALDR_RAT	Akr1b1	Aldo-keto reductase family 1 member B1	0	NLVVIPK	NLVVIPK	2	NLVVIPK2	29872.2	31075.6	19954.1
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	NLVVSVDDGATFEIVLHR	NLVVSVDDGATFEIVLHR	3	NLVVSVDDGATFEIVLHR3	10064.4		10683.6
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	NLVWNAGALHYSDEVEIIR	NLVWNAGALHYSDEVEIIR	3	NLVWNAGALHYSDEVEIIR3	15475.3	13179.1	19656.7
Q63448	Q63448	ACOX3_RAT	Acox3	Peroxisomal acyl-coenzyme A oxidase 3	1	NLWAAVLQQSGVLER	NLWAAVLQQSGVLER	2	NLWAAVLQQSGVLER2	6304.35	5185.16	4569.55
Q63448	Q63448	ACOX3_RAT	Acox3	Peroxisomal acyl-coenzyme A oxidase 3	1	NLWAAVLQQSGVLER	NLWAAVLQQSGVLER	3	NLWAAVLQQSGVLER3	2482.44		6870.26
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	NLWLFQDGPR	NLWLFQDGPR	2	NLWLFQDGPR2	20224.8	25738.1	29306.6
Q62771	Q62771	STA5A_RAT	Stat5a	Signal transducer and activator of transcription 5A	1	NLWNLKPFTTR	NLWNLKPFTTR	3	NLWNLKPFTTR3	13486.3	23117.1	16154.6
Q5XIJ5	Q5XIJ5;B5DFK7	AB17A_RAT	Abhd17a	Alpha/beta hydrolase domain-containing protein 17A	0	NLYADIDAAWQALR	NLYADIDAAWQALR	2	NLYADIDAAWQALR2	2311.52		4321.56
Q6AY17	Q6AY17	AB17B_RAT	Abhd17b	Alpha/beta hydrolase domain-containing protein 17B	1	NLYADVEAAWLALR	NLYADVEAAWLALR	2	NLYADVEAAWLALR2	3103.61	2378.87	
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	NLYAFNLFCQK	NLYAFNLFC(UniMod:4)QK	2	NLYAFNLFC(UniMod:4)QK2	9387.34	13588.3	11025.6
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	NLYFLTNK	NLYFLTNK	2	NLYFLTNK2	48549.5	56092.4	43583.8
B4F7E7	B4F7E7	PALS1_RAT	Pals1	Protein PALS1	1	NLYGTSIDSVR	NLYGTSIDSVR	2	NLYGTSIDSVR2	23968.2	28827.8	26406.5
P62832	P62832	RL23_RAT	Rpl23	Large ribosomal subunit protein uL14	1	NLYIISVK	NLYIISVK	2	NLYIISVK2	25325.5	13782.3	17736.3
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	NLYINNELQDFTK	NLYINNELQDFTK	2	NLYINNELQDFTK2	4283.56	3990.04	5015.35
Q5U1Y1	Q5U1Y1	RAB34_RAT	Rab34	Ras-related protein Rab-34	1	NLYLTASK	NLYLTASK	2	NLYLTASK2	8185.56	7214.19	9532.38
Q99MM4	Q99MM4	TRAD1_RAT	Trafd1	TRAF-type zinc finger domain-containing protein 1	1	NLYPENLAPSFPHGSPGR	NLYPENLAPSFPHGSPGR	3	NLYPENLAPSFPHGSPGR3	4948.79		7514.86
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	NLYQLSNLGIPGAWAFHIGSR	NLYQLSNLGIPGAWAFHIGSR	3	NLYQLSNLGIPGAWAFHIGSR3	25501.3	34312.2	22442.3
Q641X8	Q641X8;A0A0G2K273	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	0	NLYSDDIPHALR	NLYSDDIPHALR	2	NLYSDDIPHALR2	46177.8	49063.9	43556.3
Q641X8	Q641X8;A0A0G2K273	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	0	NLYSDDIPHALR	NLYSDDIPHALR	3	NLYSDDIPHALR3	280753	299869	303300
Q8VHE9	Q8VHE9	RETST_RAT	Retsat	All-trans-retinol 13,14-reductase	1	NLYSDLQALGSK	NLYSDLQALGSK	2	NLYSDLQALGSK2	13896.1	23312	10236.6
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	NLYSLDLSDLPLDK	NLYSLDLSDLPLDK	2	NLYSLDLSDLPLDK2	8450.32	8503.7	6982.85
Q62763	Q62762;Q62763;Q62761	KC1G3_RAT	Csnk1g3	Casein kinase I isoform gamma-3	0	NLYTNEYVAIK	NLYTNEYVAIK	2	NLYTNEYVAIK2	23147.6	23448.4	23311.4
A0A0G2K0H3	A0A8I6G721;A0A0G2K0H3	A0A0G2K0H3_RAT	Lrp6	Low-density lipoprotein receptor-related protein	0	NLYWTDTGTDR	NLYWTDTGTDR	2	NLYWTDTGTDR2		6003.71	2550.81
P70500	P70500	CDIPT_RAT	Cdipt	CDP-diacylglycerol--inositol 3-phosphatidyltransferase	1	NMAALDAADR	NMAALDAADR	2	NMAALDAADR2	62933.6	47145.7	54628.5
Q5XFX0	Q5XFX0	TAGL2_RAT	Tagln2	Transgelin-2	1	NMACVQR	NMAC(UniMod:4)VQR	2	NMAC(UniMod:4)VQR2	1.78995e+06	1.78922e+06	1.79479e+06
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	NMADAMK	NMADAMK	2	NMADAMK2	40451.2	32717.9	32371.4
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	NMAEQIIQEIYSQVQSK	NMAEQIIQEIYSQVQSK	3	NMAEQIIQEIYSQVQSK3	12075.9	4225.95	
O70377	O70377	SNP23_RAT	Snap23	Synaptosomal-associated protein 23	1	NMALDMGNEIDAQNQQIQK	NMALDMGNEIDAQNQQIQK	3	NMALDMGNEIDAQNQQIQK3	135189	160305	190182
B5DF91	B5DF91	ELAV1_RAT	Elavl1	ELAV-like protein 1	1	NMALLSQLYHSPAR	NMALLSQLYHSPAR	3	NMALLSQLYHSPAR3	16555.6	16280.6	16253.9
Q66HC5	Q66HC5	NUP93_RAT	Nup93	Nuclear pore complex protein Nup93	1	NMALSIAER	NMALSIAER	2	NMALSIAER2	13414.5	17974.4	19328.3
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	NMAPDLR	NMAPDLR	2	NMAPDLR2	400664	441926	366634
D3ZF26	D3ZF26	D3ZF26_RAT	Tnks1bp1	Tankyrase 1 binding protein 1	1	NMAPGAGCSPGEPR	NMAPGAGC(UniMod:4)SPGEPR	2	NMAPGAGC(UniMod:4)SPGEPR2	11323	13361	5799.58
A0A8I5ZLD3	A0A8I5ZLD3	A0A8I5ZLD3_RAT	Abi2	Abl-interactor 2	1	NMAPSQQSPVR	NMAPSQQSPVR	2	NMAPSQQSPVR2	95206.6	84137.3	87500.6
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	NMASHPVSLHAVGMSFWK	NMASHPVSLHAVGMSFWK	3	NMASHPVSLHAVGMSFWK3	49238.9	61205	31240.7
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	NMASHPVSLHAVGMSFWK	NMASHPVSLHAVGMSFWK	4	NMASHPVSLHAVGMSFWK4	90248.4	96165.6	90793.1
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	NMDDDRVPR	NMDDDRVPR	2	NMDDDRVPR2	5754.21	11582	9011.3
D3ZUP8	D3ZUP8	D3ZUP8_RAT	Lmbrd2	LMBR1 domain containing 2	1	NMDDYEDFDEK	NMDDYEDFDEK	2	NMDDYEDFDEK2	3506.46	5041.16	6945.52
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	NMDPLNDNIATLLHQSSDK	NMDPLNDNIATLLHQSSDK	3	NMDPLNDNIATLLHQSSDK3	6.04005e+06	6.55112e+06	7.19994e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	NMDPLNDNIATLLHQSSDKFVSELWK	NMDPLNDNIATLLHQSSDKFVSELWK	4	NMDPLNDNIATLLHQSSDKFVSELWK4	21093.2	14792.1	16819.4
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	NMDSMPELQK	NMDSMPELQK	2	NMDSMPELQK2	43467.3	20648.1	28820.7
A0A8I6GAD6	A0A8I6GAD6	A0A8I6GAD6_RAT	Nrbp1	Nuclear receptor binding protein 1	1	NMDTSAVLAEIPAGPGR	NMDTSAVLAEIPAGPGR	2	NMDTSAVLAEIPAGPGR2	107105	86949.4	92988
A0A8I6GAD6	A0A8I6GAD6	A0A8I6GAD6_RAT	Nrbp1	Nuclear receptor binding protein 1	1	NMDTSAVLAEIPAGPGR	NMDTSAVLAEIPAGPGR	3	NMDTSAVLAEIPAGPGR3	48980.9	42498.2	34519.1
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	NMDYMRPDIVALLR	NMDYMRPDIVALLR	3	NMDYMRPDIVALLR3	87536.1	83489.6	67180.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	NMEASVK	NMEASVK	1	NMEASVK1	7853.23	10365.5	9907.27
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	NMEASVK	NMEASVK	2	NMEASVK2	743870	969032	1.01207e+06
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	NMEGNCPPSWNIDSSCK	NMEGNC(UniMod:4)PPSWNIDSSC(UniMod:4)K	3	NMEGNC(UniMod:4)PPSWNIDSSC(UniMod:4)K3		12559.5	6839.75
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	NMELNVLDSLNTK	NMELNVLDSLNTK	2	NMELNVLDSLNTK2	80360.8	86414.9	81659.9
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	NMEQFTIHITVGAQSK	NMEQFTIHITVGAQSK	2	NMEQFTIHITVGAQSK2	268098	334995	237337
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	NMEQFTIHITVGAQSK	NMEQFTIHITVGAQSK	3	NMEQFTIHITVGAQSK3	4.63539e+06	5.85795e+06	4.56364e+06
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	NMETFCEESR	NMETFC(UniMod:4)EESR	2	NMETFC(UniMod:4)EESR2	13164.8	8435.63	11202.2
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	NMETFCEESRK	NMETFC(UniMod:4)EESRK	2	NMETFC(UniMod:4)EESRK2	2290.13		
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	NMETFCEESRK	NMETFC(UniMod:4)EESRK	3	NMETFC(UniMod:4)EESRK3	23186.7	29866.4	27194.3
A0A8I5ZYN9	A0A8I5ZYN9	A0A8I5ZYN9_RAT	Ipo11-ps1	Similar to importin 11	1	NMEVMGFLHGIFER	NMEVMGFLHGIFER	3	NMEVMGFLHGIFER3	2782.37	15950	15181.1
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	NMFLPQK	NMFLPQK	2	NMFLPQK2	16310.2	10520.2	9871.64
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	NMFLQAVK	NMFLQAVK	2	NMFLQAVK2	268843	255458	274323
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	NMFQVIQPER	NMFQVIQPER	2	NMFQVIQPER2	709538	704501	798459
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	NMFQVIQPER	NMFQVIQPER	3	NMFQVIQPER3	16389.8	21324.3	27841.3
Q66H94	Q66H94	FKBP9_RAT	Fkbp9	Peptidyl-prolyl cis-trans isomerase FKBP9	1	NMFTNQDR	NMFTNQDR	2	NMFTNQDR2	19380.4	17318.3	20564.7
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	NMFTQCQTR	NMFTQC(UniMod:4)QTR	2	NMFTQC(UniMod:4)QTR2	61631.1	69133.1	67294.8
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	NMFTVNR	NMFTVNR	2	NMFTVNR2	2.22321e+06	2.23379e+06	2.2757e+06
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	NMGAHAVVLELLQIPYEK	NMGAHAVVLELLQIPYEK	3	NMGAHAVVLELLQIPYEK3	57337.1	48886.2	73953.9
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	NMGAHSVVLDLLQIPYEK	NMGAHSVVLDLLQIPYEK	3	NMGAHSVVLDLLQIPYEK3	7585.11	3721.63	10323.6
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	NMGGLMHSK	NMGGLMHSK	2	NMGGLMHSK2	18738.7	17820.8	15690.7
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	NMGLIAER	NMGLIAER	2	NMGLIAER2	842211	503697	416366
P00507	P00507;A0A8I6GJR0	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	0	NMGLYGER	NMGLYGER	2	NMGLYGER2	308456	318467	312902
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	NMGMIVINEGSLDGTR	NMGMIVINEGSLDGTR	2	NMGMIVINEGSLDGTR2	44938.5	34140.8	39129.2
A0A8I5ZP83	D4A9Z8;A0A8I5ZP83	A0A8I5ZP83_RAT	Chmp4b	Charged multivesicular body protein 4B	0	NMGYAAK	NMGYAAK	1	NMGYAAK1	4472.38	7063.02	5276.83
Q5M7T2	Q5M7T2	SPRY7_RAT	Spryd7	SPRY domain-containing protein 7	1	NMHCPASGIR	NMHC(UniMod:4)PASGIR	2	NMHC(UniMod:4)PASGIR2	11618	10068.4	5071.92
Q5M7T2	Q5M7T2	SPRY7_RAT	Spryd7	SPRY domain-containing protein 7	1	NMHCPASGIR	NMHC(UniMod:4)PASGIR	3	NMHC(UniMod:4)PASGIR3	60488.1	61269.4	73206.6
A0A8I6A182	A0A8I6A182	A0A8I6A182_RAT	Pitpnc1	Phosphatidylinositol transfer protein, cytoplasmic 1	1	NMHEQTNIK	NMHEQTNIK	2	NMHEQTNIK2			6501.91
O54923	O54923	EXOC6_RAT	Exoc6	Exocyst complex component 6	1	NMHVNNDR	NMHVNNDR	2	NMHVNNDR2			1021.41
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	NMIDAGDALIYMEPEK	NMIDAGDALIYMEPEK	2	NMIDAGDALIYMEPEK2	15346.3	20984.1	27377.6
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	NMIDAGDALIYMEPEK	NMIDAGDALIYMEPEK	3	NMIDAGDALIYMEPEK3	5308	2473.12	4207.59
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	NMIENSMFEEEPDVVDLAK	NMIENSMFEEEPDVVDLAK	3	NMIENSMFEEEPDVVDLAK3	4989.15	9479.72	5867.3
Q64244	Q64244	CD38_RAT	Cd38	ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1	1	NMIFACQDNYR	NMIFAC(UniMod:4)QDNYR	2	NMIFAC(UniMod:4)QDNYR2	8247.02	6612.37	6213.59
Q64244	Q64244	CD38_RAT	Cd38	ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1	1	NMIFACQDNYRPVR	NMIFAC(UniMod:4)QDNYRPVR	2	NMIFAC(UniMod:4)QDNYRPVR2	10767.2	10306.7	12782
Q64244	Q64244	CD38_RAT	Cd38	ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1	1	NMIFACQDNYRPVR	NMIFAC(UniMod:4)QDNYRPVR	3	NMIFAC(UniMod:4)QDNYRPVR3	359900	357449	463817
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	NMIGQDSDK	NMIGQDSDK	2	NMIGQDSDK2	6396.29	6956.98	
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	NMIIDRENQCVIISGESGAGK	NMIIDRENQC(UniMod:4)VIISGESGAGK	3	NMIIDRENQC(UniMod:4)VIISGESGAGK3	47767.9	52085	49083.8
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	NMININSR	NMININSR	2	NMININSR2	77978	70417.7	77562.5
P31399	P31399	ATP5H_RAT	Atp5pd	ATP synthase subunit d, mitochondrial	1	NMIPFDQMTIDDLNEVFPETK	NMIPFDQMTIDDLNEVFPETK	3	NMIPFDQMTIDDLNEVFPETK3	142089	111869	147050
B2GV52	B2GV52	BL1S5_RAT	Bloc1s5	Biogenesis of lysosome-related organelles complex 1 subunit 5	1	NMIQETNER	NMIQETNER	2	NMIQETNER2	26603	27405.7	32153.1
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	NMITGTAPLDGCILVVAANDGPMPQTR	NMITGTAPLDGC(UniMod:4)ILVVAANDGPMPQTR	3	NMITGTAPLDGC(UniMod:4)ILVVAANDGPMPQTR3	20198.3	17396.3	31353.7
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	NMITQYWPDR	NMITQYWPDR	2	NMITQYWPDR2	12281.4	8497.76	9295.39
P11507	Q64578;P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	0	NMLFSGTNIAAGK	NMLFSGTNIAAGK	2	NMLFSGTNIAAGK2	369184	342879	412974
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	NMLFSGTNIASGK	NMLFSGTNIASGK	2	NMLFSGTNIASGK2	1.1013e+06	1.15393e+06	1.20419e+06
F1LQI6	F1LQI6	F1LQI6_RAT	Zer1	Zyg-11 related, cell cycle regulator	1	NMLGLLGNVAEVK	NMLGLLGNVAEVK	2	NMLGLLGNVAEVK2		3884.61	3281.28
Q3B8R7	Q3B8R7	Q3B8R7_RAT	Mrpl47	Mitochondrial ribosomal protein L47	1	NMLLTLEQEAK	NMLLTLEQEAK	2	NMLLTLEQEAK2	7839.1	13949.1	11853
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	NMLLVMDTAEIFHSADAR	NMLLVMDTAEIFHSADAR	3	NMLLVMDTAEIFHSADAR3	10117.2	10656.6	13177
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	NMLPDVGK	NMLPDVGK	1	NMLPDVGK1	7937.6	5289.86	3927.06
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	NMLPDVGK	NMLPDVGK	2	NMLPDVGK2	343251	312915	312921
D3ZZA8	D3ZZA8	D3ZZA8_RAT	Sec24a	SEC24 homolog A, COPII coat complex component	1	NMLPSTPLQPPVPNLLEDVQK	NMLPSTPLQPPVPNLLEDVQK	3	NMLPSTPLQPPVPNLLEDVQK3	5252.12	7154.2	5603.73
P85108	P69897;Q4QRB4;Q6P9T8;B4F7C2;P85108;Q4QQV0;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	NMMAACDPR	NMMAAC(UniMod:4)DPR	2	NMMAAC(UniMod:4)DPR2	24752.4	25730.3	30125.6
P32038	P32038	CFAD_RAT	Cfd	Complement factor D	1	NMMCAESNR	NMMC(UniMod:4)AESNR	2	NMMC(UniMod:4)AESNR2	76040.7	58354	55914.9
P32038	P32038	CFAD_RAT	Cfd	Complement factor D	1	NMMCAESNRR	NMMC(UniMod:4)AESNRR	3	NMMC(UniMod:4)AESNRR3	371560	378385	
Q63632	Q63632	S12A4_RAT	Slc12a4	Solute carrier family 12 member 4	1	NMMEIEK	NMMEIEK	2	NMMEIEK2	9479.56		12133
A0A8I5Y9U2	A0A8I5Y9U2	A0A8I5Y9U2_RAT	Cnot2	CCR4-NOT transcription complex, subunit 2	1	NMMNHSQVGQGIGIPSR	NMMNHSQVGQGIGIPSR	3	NMMNHSQVGQGIGIPSR3	10382.3	9933.35	5744.98
A0A8I6A9M7	A0A8I6A9M7;A0A8I6GHU4	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	0	NMMPSSFAMK	NMMPSSFAMK	2	NMMPSSFAMK2	27086.1	36643.1	42782
P47853	P47853	PGS1_RAT	Bgn	Biglycan	1	NMNCIEMGGNPLENSGFEPGAFDGLK	NMNC(UniMod:4)IEMGGNPLENSGFEPGAFDGLK	3	NMNC(UniMod:4)IEMGGNPLENSGFEPGAFDGLK3	33591.7	29171.8	28505.9
A0A8I5XWT0	A0A8I5XWT0	A0A8I5XWT0_RAT	Cd55	CD55 molecule (Cromer blood group)	1	NMNFFPIGTTVEFECRPGFQK	NMNFFPIGTTVEFEC(UniMod:4)RPGFQK	3	NMNFFPIGTTVEFEC(UniMod:4)RPGFQK3	537425	627719	582405
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	NMNKEDEGEITK	NMNKEDEGEITK	3	NMNKEDEGEITK3		35977.5	34274.1
A0A8I6AKR4	A0A8I6AKR4	A0A8I6AKR4_RAT	Ap3s1	Adaptor related protein complex 3 subunit sigma 1	1	NMNLPEIPR	NMNLPEIPR	2	NMNLPEIPR2	190987	194490	226764
Q3KR92	Q3KR92	TPST1_RAT	Tpst1	Protein-tyrosine sulfotransferase 1	1	NMPLIFIGGVPR	NMPLIFIGGVPR	2	NMPLIFIGGVPR2	26574.3	21385.9	25408.1
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	NMPLQHLLEQIK	NMPLQHLLEQIK	3	NMPLQHLLEQIK3	15820.2	10844	10942.5
A0A0G2JT44	A0A0G2JT44	A0A0G2JT44_RAT	Tmc6	Transmembrane channel-like protein	1	NMPLSLGEK	NMPLSLGEK	2	NMPLSLGEK2	147378	166922	147183
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	NMPSLSAATLASLGGTSSR	NMPSLSAATLASLGGTSSR	2	NMPSLSAATLASLGGTSSR2	52006.4	59635.5	58296.5
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	NMPSLSAATLASLGGTSSR	NMPSLSAATLASLGGTSSR	3	NMPSLSAATLASLGGTSSR3	9560.41	4735.2	8901.1
Q63692	Q63692	CDC37_RAT	Cdc37	Hsp90 co-chaperone Cdc37	1	NMPWNVDTLSK	NMPWNVDTLSK	2	NMPWNVDTLSK2	1.59668e+06	1.29592e+06	1.40114e+06
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	NMQLSNTPDSGISLLHK	NMQLSNTPDSGISLLHK	3	NMQLSNTPDSGISLLHK3	6322.09	12327.8	6768.08
P18421	P18421	PSB1_RAT	Psmb1	Proteasome subunit beta type-1	1	NMQNVEHVPLTLDR	NMQNVEHVPLTLDR	2	NMQNVEHVPLTLDR2	517347	499970	466405
P18421	P18421	PSB1_RAT	Psmb1	Proteasome subunit beta type-1	1	NMQNVEHVPLTLDR	NMQNVEHVPLTLDR	3	NMQNVEHVPLTLDR3	4.22609e+06	4.61627e+06	4.60796e+06
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	NMQSSESHPLR	NMQSSESHPLR	3	NMQSSESHPLR3		471585	554584
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	NMSPDLR	NMSPDLR	2	NMSPDLR2	513501	580639	550156
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	NMSSGGILR	NMSSGGILR	2	NMSSGGILR2	19474.8	22395.7	15938.7
P62282	P62282;A0A8I6AKU9;A0A8I5Y1A5	RS11_RAT	Rps11	Small ribosomal subunit protein uS17	0	NMSVHLSPCFR	NMSVHLSPC(UniMod:4)FR	2	NMSVHLSPC(UniMod:4)FR2	2391.67	2446.39	2222.73
P62282	P62282;A0A8I6AKU9;A0A8I5Y1A5	RS11_RAT	Rps11	Small ribosomal subunit protein uS17	0	NMSVHLSPCFR	NMSVHLSPC(UniMod:4)FR	3	NMSVHLSPC(UniMod:4)FR3	33141	41981.3	43369.4
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	NMSVIAHVDHGK	NMSVIAHVDHGK	2	NMSVIAHVDHGK2	4154.66	2847.53	4055.45
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	NMSVIAHVDHGK	NMSVIAHVDHGK	3	NMSVIAHVDHGK3	106074	141418	122281
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	NMSYQGFTK	NMSYQGFTK	2	NMSYQGFTK2	21385.7	16271.3	24045.3
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	NMTVEQLLTGSPTSPTVEPEKPTR	NMTVEQLLTGSPTSPTVEPEKPTR	3	NMTVEQLLTGSPTSPTVEPEKPTR3	401613	385729	468224
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	NMTVEQLLTGSPTSPTVEPEKPTR	NMTVEQLLTGSPTSPTVEPEKPTR	4	NMTVEQLLTGSPTSPTVEPEKPTR4	26001.7	20806.7	35248.2
P54748	P54748	PDE4A_RAT	Pde4a	cAMP-specific 3',5'-cyclic phosphodiesterase 4A	1	NMVHCADLSNPTKPLELYR	NMVHC(UniMod:4)ADLSNPTKPLELYR	4	NMVHC(UniMod:4)ADLSNPTKPLELYR4	3908.58	11603.2	5927.86
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	NMVLAER	NMVLAER	2	NMVLAER2	50374.2	56605.7	67303.1
A0A8I5ZM67	A0A8I5ZM67	A0A8I5ZM67_RAT	Borcs7	BLOC-1-related complex subunit 7	1	NMVLQEDAILHSEDSLRK	NMVLQEDAILHSEDSLRK	4	NMVLQEDAILHSEDSLRK4	5367.14	7130.1	2185.31
P06685	P06687;P06685;P06686	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	0	NMVPQQALVIR	NMVPQQALVIR	2	NMVPQQALVIR2	445970	408832	410731
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	NMVQFNLQTLPK	NMVQFNLQTLPK	2	NMVQFNLQTLPK2	113222	127969	133191
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	NMVQWSPFVMSFK	NMVQWSPFVMSFK	2	NMVQWSPFVMSFK2	17851.4	24917.2	28646.6
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	NMVSILSSFESR	NMVSILSSFESR	2	NMVSILSSFESR2	36339.5	21783.5	36944.3
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	NMVVYAGVEEQPK	NMVVYAGVEEQPK	2	NMVVYAGVEEQPK2	11075	9394.55	11090.9
D4AC36	D4AC36	D4AC36_RAT	Eif3f	Eukaryotic translation initiation factor 3 subunit F	1	NMYELHK	NMYELHK	2	NMYELHK2	73445.1	52680.5	57810.4
D4AC36	D4AC36	D4AC36_RAT	Eif3f	Eukaryotic translation initiation factor 3 subunit F	1	NMYELHKK	NMYELHKK	2	NMYELHKK2		3732.69	
B0BN85	B0BN85	SGT1_RAT	Sugt1	Protein SGT1 homolog	1	NMYPSSSHYTR	NMYPSSSHYTR	2	NMYPSSSHYTR2	2563.01	4871.72	1103.85
B0BN85	B0BN85	SGT1_RAT	Sugt1	Protein SGT1 homolog	1	NMYPSSSHYTR	NMYPSSSHYTR	3	NMYPSSSHYTR3	20562.5	17396.7	17370.4
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	NNAASEGVLASFFNSLLSK	NNAASEGVLASFFNSLLSK	3	NNAASEGVLASFFNSLLSK3	4841.63		
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	NNADLQVLEPEPELLYK	NNADLQVLEPEPELLYK	3	NNADLQVLEPEPELLYK3	69781.7	56800.3	67245.8
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	NNADTLYEVVCLESESER	NNADTLYEVVC(UniMod:4)LESESER	3	NNADTLYEVVC(UniMod:4)LESESER3	3437.68		
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	NNADTLYEVVCLESESERER	NNADTLYEVVC(UniMod:4)LESESERER	3	NNADTLYEVVC(UniMod:4)LESESERER3	31280.1	36041.6	34568.1
P85107	P85107	TGS1_RAT	Tgs1	Trimethylguanosine synthase	1	NNAEVYGVADK	NNAEVYGVADK	2	NNAEVYGVADK2	1417.66	1064.59	
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	NNAIYDK	NNAIYDK	1	NNAIYDK1	53348	28265.9	46946.3
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	NNAIYDK	NNAIYDK	2	NNAIYDK2	868548	817808	868736
A0A0G2JZS1	A0A0G2JZS1	A0A0G2JZS1_RAT	Kpna6	Importin subunit alpha	1	NNALNPEEMR	NNALNPEEMR	2	NNALNPEEMR2	38094.5	39401.3	25588.7
A0A0G2JZS1	A0A0G2JZS1	A0A0G2JZS1_RAT	Kpna6	Importin subunit alpha	1	NNALNPEEMRR	NNALNPEEMRR	3	NNALNPEEMRR3	19128.9	27713.6	
D3ZF12	D3ZF12	D3ZF12_RAT	Spcs3	Signal peptidase complex subunit 3	1	NNALNQVVLWDK	NNALNQVVLWDK	2	NNALNQVVLWDK2	169823	154941	166491
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	NNANGVDLNR	NNANGVDLNR	2	NNANGVDLNR2	701072	605127	644050
Q66HF2	Q66HF2	TM9S1_RAT	Tm9sf1	Transmembrane 9 superfamily member 1	1	NNASPFDAPCR	NNASPFDAPC(UniMod:4)R	2	NNASPFDAPC(UniMod:4)R2	11176.1	11535.6	14538.1
P21531	P21531	RL3_RAT	Rpl3	Large ribosomal subunit protein uL3	1	NNASTDYDLSDK	NNASTDYDLSDK	2	NNASTDYDLSDK2	22603	12809.4	15189.6
A0A8I5ZUI2	A0A8I5ZUI2	A0A8I5ZUI2_RAT	Ano10	Anoctamin	1	NNCITPGQGGDASLS	NNC(UniMod:4)ITPGQGGDASLS	2	NNC(UniMod:4)ITPGQGGDASLS2	3959.31	3944.62	7853.7
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	NNDALHMSLESLICESR	NNDALHMSLESLIC(UniMod:4)ESR	3	NNDALHMSLESLIC(UniMod:4)ESR3	12631.3	18183.8	14597.7
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	NNDHPEITYR	NNDHPEITYR	3	NNDHPEITYR3	6098.67	7992.48	3511.69
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	NNDLCYWVPEFVR	NNDLC(UniMod:4)YWVPEFVR	2	NNDLC(UniMod:4)YWVPEFVR2	30702	23470.1	23766.1
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	NNDLCYWVPEFVR	NNDLC(UniMod:4)YWVPEFVR	3	NNDLC(UniMod:4)YWVPEFVR3	5083.68	3748.55	11972.8
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	NNDLILYYFSDAK	NNDLILYYFSDAK	2	NNDLILYYFSDAK2	34082.4	36212.8	44980.7
Q63355	Q62774;Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	0	NNDLLFR	NNDLLFR	2	NNDLLFR2	104719	118028	96609.8
F7F288	F7F288	F7F288_RAT	Bcap29	B-cell receptor-associated protein	1	NNDNTEEHVLETENK	NNDNTEEHVLETENK	2	NNDNTEEHVLETENK2	3047.79	2301.67	1525.95
F7F288	F7F288	F7F288_RAT	Bcap29	B-cell receptor-associated protein	1	NNDNTEEHVLETENK	NNDNTEEHVLETENK	3	NNDNTEEHVLETENK3	16552	20477.6	21713.4
P70567	P70567	TMOD1_RAT	Tmod1	Tropomodulin-1	1	NNDPELEEVNLNNIR	NNDPELEEVNLNNIR	2	NNDPELEEVNLNNIR2	2469.66	4328.13	1521.25
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	NNDVEEQGVPNR	NNDVEEQGVPNR	2	NNDVEEQGVPNR2	51978.9	46475.8	40975.8
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	NNDVEEQGVPNR	NNDVEEQGVPNR	3	NNDVEEQGVPNR3	2951.75	5963.63	4680.27
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	NNEALAR	NNEALAR	2	NNEALAR2	101407	121433	120996
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	NNEALDDLK	NNEALDDLK	2	NNEALDDLK2	98120.1	106074	116822
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	NNEALDDLKSQK	NNEALDDLKSQK	2	NNEALDDLKSQK2	1990.68		
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	NNEALDDLKSQK	NNEALDDLKSQK	3	NNEALDDLKSQK3	7583.65	12015.3	10272.2
Q07984	Q07984	SSRD_RAT	Ssr4	Translocon-associated protein subunit delta	1	NNEDVSIIPPLFTVSVDHR	NNEDVSIIPPLFTVSVDHR	3	NNEDVSIIPPLFTVSVDHR3	76365.6	65828.7	74066.7
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	NNEEWTVDSCTECHCQNSVTICK	NNEEWTVDSC(UniMod:4)TEC(UniMod:4)HC(UniMod:4)QNSVTIC(UniMod:4)K	3	NNEEWTVDSC(UniMod:4)TEC(UniMod:4)HC(UniMod:4)QNSVTIC(UniMod:4)K3	33911.3	37771.7	2.3139e+06
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	NNEEWTVDSCTECHCQNSVTICK	NNEEWTVDSC(UniMod:4)TEC(UniMod:4)HC(UniMod:4)QNSVTIC(UniMod:4)K	4	NNEEWTVDSC(UniMod:4)TEC(UniMod:4)HC(UniMod:4)QNSVTIC(UniMod:4)K4	62213.7	76757.4	53558.6
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	NNEEWTVDSCTECHCQNSVTICKK	NNEEWTVDSC(UniMod:4)TEC(UniMod:4)HC(UniMod:4)QNSVTIC(UniMod:4)KK	4	NNEEWTVDSC(UniMod:4)TEC(UniMod:4)HC(UniMod:4)QNSVTIC(UniMod:4)KK4	173761	243254	264383
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	NNELIAIGK	NNELIAIGK	1	NNELIAIGK1	5877.95	3363.04	2113.36
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	NNELIAIGK	NNELIAIGK	2	NNELIAIGK2	25412.1	30390.2	27389.6
Q924S1	Q924S1	PLCD_RAT	Agpat4	1-acyl-sn-glycerol-3-phosphate acyltransferase delta	1	NNENPTLLGVLNGK	NNENPTLLGVLNGK	2	NNENPTLLGVLNGK2	6374.11	5210.01	4593.51
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	NNESTCVPDHINMFFK	NNESTC(UniMod:4)VPDHINMFFK	2	NNESTC(UniMod:4)VPDHINMFFK2	9721.79	15281.1	10159.8
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	NNESTCVPDHINMFFK	NNESTC(UniMod:4)VPDHINMFFK	3	NNESTC(UniMod:4)VPDHINMFFK3	184373	240192	223375
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	NNEVSFSQIKPK	NNEVSFSQIKPK	2	NNEVSFSQIKPK2	69675.8	54132.5	58091.2
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	NNEVSFSQIKPK	NNEVSFSQIKPK	3	NNEVSFSQIKPK3	273489	229471	283344
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	NNEVSLAALK	NNEVSLAALK	2	NNEVSLAALK2	22371.8	26254.1	39058.8
D3ZHC4	D3ZHC4	D3ZHC4_RAT	Hebp2	Heme binding protein 2	1	NNEVWLIQR	NNEVWLIQR	2	NNEVWLIQR2	16171.2	7585.34	9702.55
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	NNFAAEMEK	NNFAAEMEK	2	NNFAAEMEK2	22100.6	23514.6	24914
P14270	P14270	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	1	NNFAALTNLQDR	NNFAALTNLQDR	2	NNFAALTNLQDR2	42656.4	44945.5	57646.6
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	NNFDIQK	NNFDIQK	2	NNFDIQK2	13241	11150.6	9508.05
P18298	P18298;A0A8I6G8F2	METK2_RAT	Mat2a	S-adenosylmethionine synthase isoform type-2	0	NNFDLRPGVIVR	NNFDLRPGVIVR	3	NNFDLRPGVIVR3	61413.5	62765	72623.1
Q8R4E1	Q8R4E1	TIP_RAT	Itfg1	T-cell immunomodulatory protein	1	NNFEADAYFVK	NNFEADAYFVK	2	NNFEADAYFVK2	3940.89	2685.37	
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	NNFEDLHCK	NNFEDLHC(UniMod:4)K	2	NNFEDLHC(UniMod:4)K2	2703.16	3302.89	2651.57
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	NNFEDLHCK	NNFEDLHC(UniMod:4)K	3	NNFEDLHC(UniMod:4)K3	5107.48	7972.21	
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	NNFEGEITK	NNFEGEITK	2	NNFEGEITK2	1.33218e+06	1.41991e+06	1.46498e+06
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	NNFEGEITKEK	NNFEGEITKEK	3	NNFEGEITKEK3	8303.49	11644.3	17659.7
P15943	P15943	APLP2_RAT	Aplp2	Amyloid beta precursor like protein 2	1	NNFESEDYCMAVCK	NNFESEDYC(UniMod:4)MAVC(UniMod:4)K	2	NNFESEDYC(UniMod:4)MAVC(UniMod:4)K2	11521.9	14145.9	21153
P15943	P15943	APLP2_RAT	Aplp2	Amyloid beta precursor like protein 2	1	NNFESEDYCMAVCK	NNFESEDYC(UniMod:4)MAVC(UniMod:4)K	3	NNFESEDYC(UniMod:4)MAVC(UniMod:4)K3	8343.32	12662.5	12293.6
G3V8D0	G3V8D0	G3V8D0_RAT	St8sia3	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	1	NNFFLSLK	NNFFLSLK	2	NNFFLSLK2	5171.06	1454.18	3482.68
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	NNFLPNADMETR	NNFLPNADMETR	2	NNFLPNADMETR2	283346	304287	288668
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	NNFRPQQALNDR	NNFRPQQALNDR	2	NNFRPQQALNDR2	13334.9	18491.4	16518.2
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	NNFRPQQALNDR	NNFRPQQALNDR	3	NNFRPQQALNDR3	612716	718318	643871
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	NNFSDGFR	NNFSDGFR	2	NNFSDGFR2	114258	112720	137762
Q8K3P7	Q8K3P7	HINT3_RAT	Hint3	Adenosine 5'-monophosphoramidase HINT3	1	NNFTDFTDVR	NNFTDFTDVR	2	NNFTDFTDVR2	32649.2	30974.9	22460.8
Q68FY0	Q68FY0	QCR1_RAT	Uqcrc1	Cytochrome b-c1 complex subunit 1, mitochondrial	1	NNGAGYFLEHLAFK	NNGAGYFLEHLAFK	2	NNGAGYFLEHLAFK2	14994.6	8802.05	7711.59
Q68FY0	Q68FY0	QCR1_RAT	Uqcrc1	Cytochrome b-c1 complex subunit 1, mitochondrial	1	NNGAGYFLEHLAFK	NNGAGYFLEHLAFK	3	NNGAGYFLEHLAFK3	28835.9	34766.2	37935.2
D3ZYR1	D3ZYR1	FCHO2_RAT	Fcho2	F-BAR domain only protein 2	1	NNGFDVLYHNMK	NNGFDVLYHNMK	3	NNGFDVLYHNMK3	8264.06	7447.71	17122.1
A0A8I6A371	A0A8I6A371	A0A8I6A371_RAT	Nmi	N-myc (and STAT) interactor	1	NNGGGEVEVVK	NNGGGEVEVVK	2	NNGGGEVEVVK2	2584.29	5870.16	2489.98
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	NNGPSSFSK	NNGPSSFSK	2	NNGPSSFSK2	209776	169097	200974
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	NNGVLFENQLLQIGLK	NNGVLFENQLLQIGLK	2	NNGVLFENQLLQIGLK2	5347.68		4300.47
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	NNGVPILK	NNGVPILK	2	NNGVPILK2	280246	238282	232158
Q5BJQ2	D3ZWA1;Q5BJQ2	MINY1_RAT	Mindy1	Ubiquitin carboxyl-terminal hydrolase MINDY-1	0	NNHFSTMTK	NNHFSTMTK	2	NNHFSTMTK2	9599.87	5415.22	7418.74
Q62796	Q62796	RBP1_RAT	Ralbp1	RalA-binding protein 1	1	NNHLNQAVHEER	NNHLNQAVHEER	2	NNHLNQAVHEER2	1565.14		
P19511	P19511	AT5F1_RAT	Atp5pb	ATP synthase F(0) complex subunit B1, mitochondrial	1	NNIALALEVTYR	NNIALALEVTYR	2	NNIALALEVTYR2	56538.3	54302.8	51881.3
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	NNICLDLSPGHGLDGR	NNIC(UniMod:4)LDLSPGHGLDGR	2	NNIC(UniMod:4)LDLSPGHGLDGR2	19195.1	23812.5	14125
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	NNICLDLSPGHGLDGR	NNIC(UniMod:4)LDLSPGHGLDGR	3	NNIC(UniMod:4)LDLSPGHGLDGR3	177600	165847	158847
O54857	O54857	PTEN_RAT	Pten	Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN	1	NNIDDVVR	NNIDDVVR	2	NNIDDVVR2	55818.2	53247.8	51307.6
D3ZAI6	D3ZAI6	D3ZAI6_RAT	Nt5dc3	5'-nucleotidase domain containing 3	1	NNIDYEPVHLYK	NNIDYEPVHLYK	2	NNIDYEPVHLYK2	1940.73	5265.2	3120.7
D3ZAI6	D3ZAI6	D3ZAI6_RAT	Nt5dc3	5'-nucleotidase domain containing 3	1	NNIDYEPVHLYK	NNIDYEPVHLYK	3	NNIDYEPVHLYK3	15579.9	16281.6	12429.5
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	NNIEDVR	NNIEDVR	2	NNIEDVR2	39361	48690.8	37281.8
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	NNIEWLK	NNIEWLK	2	NNIEWLK2	32275.1	26735.9	43731.7
O54923	O54923	EXOC6_RAT	Exoc6	Exocyst complex component 6	1	NNIFAQFR	NNIFAQFR	2	NNIFAQFR2	15122.9	6286.94	12741.4
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	NNIHCNTIAPNAGSR	NNIHC(UniMod:4)NTIAPNAGSR	2	NNIHC(UniMod:4)NTIAPNAGSR2	4647.38	1587.94	7399.46
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	NNIHCNTIAPNAGSR	NNIHC(UniMod:4)NTIAPNAGSR	3	NNIHC(UniMod:4)NTIAPNAGSR3	147038	132137	130314
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	NNIIQTWR	NNIIQTWR	2	NNIIQTWR2	19799.1	17109.1	26375.4
P09527	P09527	RAB7A_RAT	Rab7a	Ras-related protein Rab-7a	1	NNIPYFETSAK	NNIPYFETSAK	2	NNIPYFETSAK2	762005	723931	871843
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	NNIQQVFQK	NNIQQVFQK	2	NNIQQVFQK2	13439.4	12277.1	16669.3
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	NNKDSNSLTR	NNKDSNSLTR	2	NNKDSNSLTR2			69892.7
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	NNKDSNSLTR	NNKDSNSLTR	3	NNKDSNSLTR3			52007.2
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	NNLAGAEELFAR	NNLAGAEELFAR	2	NNLAGAEELFAR2	1.05042e+06	1.06967e+06	1.31351e+06
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	NNLAGAEELFAR	NNLAGAEELFAR	3	NNLAGAEELFAR3	4878.9	4181.49	5972.71
P37285	A0A8I5Y868;Q5PQM2;P37285	KLC1_RAT	Klc1	Kinesin light chain 1	0	NNLASCYLK	NNLASC(UniMod:4)YLK	2	NNLASC(UniMod:4)YLK2	108036	126680	130254
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	NNLFERPEGFLQAR	NNLFERPEGFLQAR	3	NNLFERPEGFLQAR3	24624.5	68328.6	74171
D4A533	D4A533	D4A533_RAT	Tapt1	Transmembrane anterior posterior transformation 1	1	NNLFQMSNSDIK	NNLFQMSNSDIK	2	NNLFQMSNSDIK2	5033.37	3577.37	7085.8
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	NNLFTSSAGHR	NNLFTSSAGHR	3	NNLFTSSAGHR3	13450.9	4988.72	13975.3
F2Z3T4	F2Z3T4;A0A0G2JX72;D3ZQV3	MBNL2_RAT	Mbnl2	Muscleblind-like protein 2	0	NNLIQQK	NNLIQQK	2	NNLIQQK2	31990.2	31173.3	19592
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	NNLIYQVDTLK	NNLIYQVDTLK	2	NNLIYQVDTLK2	83990.1	87266.1	81757.1
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	NNLIYQVDTLK	NNLIYQVDTLK	3	NNLIYQVDTLK3	7883.34	8692.88	11514.8
P08753	P08753	GNAI3_RAT	Gnai3	Guanine nucleotide-binding protein G(i) subunit alpha-3	1	NNLKECGLY	NNLKEC(UniMod:4)GLY	2	NNLKEC(UniMod:4)GLY2	611.421	3615.64	2612.9
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	NNLLGSLR	NNLLGSLR	2	NNLLGSLR2	31992.4	40154.3	37712.9
A0A8I5ZM64	A0A8I5ZM64	A0A8I5ZM64_RAT	Rcbtb1	RCC1 and BTB domain containing protein 1	1	NNLLSPTQIMVEK	NNLLSPTQIMVEK	2	NNLLSPTQIMVEK2	7017.95	6389.09	5834.49
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	NNLLTNK	NNLLTNK	2	NNLLTNK2	31528.3	33441.7	37234.1
Q5XI97	Q5XI97	AASD1_RAT	Aarsd1	Alanyl-tRNA editing protein Aarsd1	1	NNLNLLR	NNLNLLR	2	NNLNLLR2	23054	22408.3	23327.3
D3ZLA3	D3ZLA3	D3ZLA3_RAT	Cpne3	Copine 3	1	NNLNPMWKPFK	NNLNPMWKPFK	3	NNLNPMWKPFK3	22705	30533.7	22179.8
D4A1R8	D4A1R8	CPNE1_RAT	Cpne1	Copine-1	1	NNLNPTWK	NNLNPTWK	2	NNLNPTWK2	369985	408081	368826
O35509	O35509	RB11B_RAT	Rab11b	Ras-related protein Rab-11B	1	NNLSFIETSALDSTNVEEAFK	NNLSFIETSALDSTNVEEAFK	3	NNLSFIETSALDSTNVEEAFK3	26887.8	25323.1	29378.2
P0C548	P0C548	PLPL2_RAT	Pnpla2	Patatin-like phospholipase domain-containing protein 2	1	NNLSLGDALAK	NNLSLGDALAK	2	NNLSLGDALAK2	8583.05	6798.88	7628.03
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	NNLTTYK	NNLTTYK	2	NNLTTYK2	143412	136909	83730.1
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	NNLVIFHR	NNLVIFHR	2	NNLVIFHR2	67254.7	59273	75091.8
Q499P8	Q499P8	RUSF1_RAT	Rusf1	RUS family member 1	1	NNMADVSAK	NNMADVSAK	2	NNMADVSAK2	9923.53	13375.8	
Q5FVI6	Q5FVI6	VATC1_RAT	Atp6v1c1	V-type proton ATPase subunit C 1	1	NNNLAVSSK	NNNLAVSSK	2	NNNLAVSSK2	8096.86	4929.02	4910.89
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	NNNQQLAQLQK	NNNQQLAQLQK	2	NNNQQLAQLQK2	55057.6	70314.9	53193.5
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	NNNQQLAQLQK	NNNQQLAQLQK	3	NNNQQLAQLQK3	3525.17	5109.93	804.032
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	NNNSNQNFFK	NNNSNQNFFK	2	NNNSNQNFFK2	41137.6	67169.9	44094.3
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	NNNTDLMILK	NNNTDLMILK	2	NNNTDLMILK2	26043	25465.7	19629.1
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	NNPALFWFSR	NNPALFWFSR	2	NNPALFWFSR2	12246.1	14305.1	6326.94
B2RZD6	B2RZD6	B2RZD6_RAT	Ndufa4	NDUFA4, mitochondrial complex associated	1	NNPEPWNK	NNPEPWNK	2	NNPEPWNK2	482599	504682	509291
P0CC10	Q45R42;P0CC10;D3ZXT1	LRC4B_RAT	Lrrc4b	Leucine-rich repeat-containing protein 4B	0	NNPIESIPSYAFNR	NNPIESIPSYAFNR	2	NNPIESIPSYAFNR2	11633.7		9301.79
Q499T5	Q499T5	Q499T5_RAT	Capn7	Calpain 7	1	NNPIYQFHIDK	NNPIYQFHIDK	3	NNPIYQFHIDK3	7423.54	6239.43	17377
F7EYC4	F7EYC4	F7EYC4_RAT	Tom1	Target of myb1 membrane trafficking protein	1	NNPPTIVHDK	NNPPTIVHDK	2	NNPPTIVHDK2	30711.3	19582.8	17779.2
A0A8I5ZP70	A0A8I5ZP70	A0A8I5ZP70_RAT	Tom1l2	Target of myb1 like 2 membrane trafficking protein	1	NNPPTIVQDK	NNPPTIVQDK	2	NNPPTIVQDK2	197373	189338	201732
B0LT89	B0LT89	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	1	NNPPTLEGSYSR	NNPPTLEGSYSR	2	NNPPTLEGSYSR2	91272.5	58415.3	79613.5
B0LT89	B0LT89	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	1	NNPPTLEGSYSRPLK	NNPPTLEGSYSRPLK	2	NNPPTLEGSYSRPLK2	16555.7	24060.2	14297.4
B0LT89	B0LT89	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	1	NNPPTLEGSYSRPLK	NNPPTLEGSYSRPLK	3	NNPPTLEGSYSRPLK3	144732	189494	171124
A0A8I6GBQ0	A0A8I6GBQ0	A0A8I6GBQ0_RAT	Stk26	Protein kinase domain-containing protein	1	NNPPTLVGDFTK	NNPPTLVGDFTK	2	NNPPTLVGDFTK2	274535	305734	265573
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	NNPSKPLR	NNPSKPLR	2	NNPSKPLR2			73321.2
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	NNPVHLITEEDLK	NNPVHLITEEDLK	2	NNPVHLITEEDLK2	6015.8	1881.69	9220.73
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	NNPVHLITEEDLK	NNPVHLITEEDLK	3	NNPVHLITEEDLK3	33589.4	38764.7	32565.2
G3V7N0	G3V7N0	G3V7N0_RAT	Hs2st1	Heparan sulfate 2-O-sulfotransferase 1	1	NNPVMSLQDQVR	NNPVMSLQDQVR	2	NNPVMSLQDQVR2	29500.2	13576.2	28877
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	NNQDCVEIYIK	NNQDC(UniMod:4)VEIYIK	2	NNQDC(UniMod:4)VEIYIK2	57031.2	41336.8	41363.1
A0A0G2K2P3	A0A0G2K2P3	A0A0G2K2P3_RAT	Tnfaip8	TNF alpha induced protein 8	1	NNQFNQDELALMEK	NNQFNQDELALMEK	2	NNQFNQDELALMEK2	6942.85	7391.92	9136.41
Q9Z118	Q9Z118	PTBP3_RAT	Ptbp3	Polypyrimidine tract-binding protein 3	1	NNQFQALLQYADPVNAQYAK	NNQFQALLQYADPVNAQYAK	3	NNQFQALLQYADPVNAQYAK3	31991		
Q00438	Q00438	PTBP1_RAT	Ptbp1	Polypyrimidine tract-binding protein 1	1	NNQFQALLQYADPVSAQHAK	NNQFQALLQYADPVSAQHAK	3	NNQFQALLQYADPVSAQHAK3	14341.3	11119.7	7838.94
P51886	P51886	LUM_RAT	Lum	Lumican	1	NNQIDHIDEK	NNQIDHIDEK	2	NNQIDHIDEK2	6140.58	3584.66	6638.61
P51886	P51886	LUM_RAT	Lum	Lumican	1	NNQIDHIDEK	NNQIDHIDEK	3	NNQIDHIDEK3	10960.6	11889.1	13286.9
P16617	Q5XIV1;P16617;M0R6Y8	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	0	NNQITNNQR	NNQITNNQR	2	NNQITNNQR2			17612.1
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	NNQKSEPLIGR	NNQKSEPLIGR	3	NNQKSEPLIGR3	10351.8	9404.76	6834.39
Q4V7D2	Q4V7D2	ROGDI_RAT	Rogdi	Protein rogdi homolog	1	NNQLLHFAFR	NNQLLHFAFR	3	NNQLLHFAFR3	4023.51	3812.27	
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	NNQSTEVPR	NNQSTEVPR	2	NNQSTEVPR2		64098.7	
A0A0G2KAE6	A0A0G2KAE6	A0A0G2KAE6_RAT	Miga2	Mitoguardin 2	1	NNQVFFGEVGR	NNQVFFGEVGR	2	NNQVFFGEVGR2	1858.59	4793.45	2721.17
D4A7L6	D4A7L6	D4A7L6_RAT	Rpia	ribose-5-phosphate isomerase	1	NNQVLGIGSGSTIVHAVQR	NNQVLGIGSGSTIVHAVQR	3	NNQVLGIGSGSTIVHAVQR3	3097.42	5548.59	10711.2
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	NNRPSEGPLQTR	NNRPSEGPLQTR	2	NNRPSEGPLQTR2	18804.8	11002.4	9605.48
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	NNRPSEGPLQTR	NNRPSEGPLQTR	3	NNRPSEGPLQTR3	718687	737960	836391
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	NNSELLNNLGNFINR	NNSELLNNLGNFINR	2	NNSELLNNLGNFINR2		6422.26	6483.45
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	NNSGLSFEELYR	NNSGLSFEELYR	2	NNSGLSFEELYR2	17454.4	9318.96	20257.5
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	NNSLQTATENTQAR	NNSLQTATENTQAR	2	NNSLQTATENTQAR2	3894.31	2990.79	4428.47
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	NNSLQTFSPQPGLER	NNSLQTFSPQPGLER	2	NNSLQTFSPQPGLER2	3259.74	6804.26	4719.67
Q04631	Q04631	FNTA_RAT	Fnta	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha	1	NNSVWNQR	NNSVWNQR	2	NNSVWNQR2	19553	8121.51	12723.1
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	NNTALQSVSLR	NNTALQSVSLR	2	NNTALQSVSLR2	90855	106163	98447.3
O88658	O88658	KIF1B_RAT	Kif1b	Kinesin-like protein KIF1B	1	NNTGEVIVTLEPCER	NNTGEVIVTLEPC(UniMod:4)ER	2	NNTGEVIVTLEPC(UniMod:4)ER2	3591.55		3601.98
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	NNTLMGKPTEGALIALAMK	NNTLMGKPTEGALIALAMK	3	NNTLMGKPTEGALIALAMK3	23211.5	29989.3	42381
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	NNTLSYYK	NNTLSYYK	2	NNTLSYYK2	15505.5		15742
Q9EQH1	Q9EQH1	GAB2_RAT	Gab2	GRB2-associated-binding protein 2	1	NNTVIDELPFK	NNTVIDELPFK	2	NNTVIDELPFK2	14438.3	17050.6	7412.55
P53534	P53534	PYGB_RAT	Pygb	Glycogen phosphorylase, brain form (Fragment)	1	NNTVNTMR	NNTVNTMR	2	NNTVNTMR2		25299.1	
P04646	F1M0T2;A0A8L2QNQ0;P04646;A0A8I5ZW32;D3ZZN4;A0A8I6A5U8	RL35A_RAT	Rpl35a	Large ribosomal subunit protein eL33	0	NNTVTPGGKPNK	NNTVTPGGKPNK	2	NNTVTPGGKPNK2			9543.49
P04646	F1M0T2;A0A8L2QNQ0;P04646;A0A8I5ZW32;D3ZZN4;A0A8I6A5U8	RL35A_RAT	Rpl35a	Large ribosomal subunit protein eL33	0	NNTVTPGGKPNK	NNTVTPGGKPNK	3	NNTVTPGGKPNK3			9701.7
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	NNVAFMSYFLQGK	NNVAFMSYFLQGK	2	NNVAFMSYFLQGK2	43410.5	62401.5	48262
G3V719	G3V719	G3V719_RAT	Plscr4	Phospholipid scramblase	1	NNVDQMVYIVTEDTDDFTR	NNVDQMVYIVTEDTDDFTR	3	NNVDQMVYIVTEDTDDFTR3	3053.15		10656.8
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	NNVEQDLK	NNVEQDLK	2	NNVEQDLK2	51810.3	49750.5	53425.2
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	NNVEQDLKEK	NNVEQDLKEK	2	NNVEQDLKEK2	3371.45	2610.68	3559.29
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	NNVEQDLKEK	NNVEQDLKEK	3	NNVEQDLKEK3	3969.45	15946.5	
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	NNVEQVCCTFECQAAR	NNVEQVC(UniMod:4)C(UniMod:4)TFEC(UniMod:4)QAAR	3	NNVEQVC(UniMod:4)C(UniMod:4)TFEC(UniMod:4)QAAR3	6685.69	10614.2	9044.55
D3ZGN7	D4A1F2;D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	0	NNVLHLWPFTIHDLR	NNVLHLWPFTIHDLR	4	NNVLHLWPFTIHDLR4	4069.4	2184.89	2251.53
Q5I0H9	Q5I0H9	PDIA5_RAT	Pdia5	Protein disulfide-isomerase A5	1	NNVLVLYSESEVAAESHLK	NNVLVLYSESEVAAESHLK	3	NNVLVLYSESEVAAESHLK3	7350.05	2242.58	9924.06
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	NNVSLLQSCIDLFK	NNVSLLQSC(UniMod:4)IDLFK	2	NNVSLLQSC(UniMod:4)IDLFK2	17783.9	19831.8	22814.6
P09895	P09895	RL5_RAT	Rpl5	Large ribosomal subunit protein uL18	1	NNVTPDMMEEMYK	NNVTPDMMEEMYK	2	NNVTPDMMEEMYK2	16780	10228.9	24573.4
P09895	P09895	RL5_RAT	Rpl5	Large ribosomal subunit protein uL18	1	NNVTPDMMEEMYKK	NNVTPDMMEEMYKK	3	NNVTPDMMEEMYKK3	15748.1	14488.5	28793.2
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	NNVVNTMR	NNVVNTMR	2	NNVVNTMR2	28089.5	32673.4	31950
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	NNVVSVNK	NNVVSVNK	2	NNVVSVNK2	49694.1	50353.7	42427.9
Q6P7Q1	Q6P7Q1	BABA2_RAT	Babam2	BRISC and BRCA1-A complex member 2	1	NNWTGEFSAR	NNWTGEFSAR	2	NNWTGEFSAR2	40796.8	42598.9	30816.2
Q710E6	Q710E6	SUCO_RAT	Suco	SUN domain-containing ossification factor	1	NNYASVECGAK	NNYASVEC(UniMod:4)GAK	2	NNYASVEC(UniMod:4)GAK2	4706.06	4454.86	2311.75
F1LNH3	F1LNH3	F1LNH3_RAT	Col6a2	Collagen type VI alpha 2 chain	1	NNYATMRPDSTEIDQDTINR	NNYATMRPDSTEIDQDTINR	3	NNYATMRPDSTEIDQDTINR3	7039.88	7513.53	1929.92
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	NNYHSEAFSVNFADSEEAK	NNYHSEAFSVNFADSEEAK	3	NNYHSEAFSVNFADSEEAK3	136740	144214	116337
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	NNYHSEAFSVNFADSEEAKK	NNYHSEAFSVNFADSEEAKK	3	NNYHSEAFSVNFADSEEAKK3	248225	231074	255379
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	NNYHSEAFSVNFADSEEAKK	NNYHSEAFSVNFADSEEAKK	4	NNYHSEAFSVNFADSEEAKK4	502677	595251	575530
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	NNYQCVCR	NNYQC(UniMod:4)VC(UniMod:4)R	2	NNYQC(UniMod:4)VC(UniMod:4)R2	53299.2	46404.6	52722.6
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	NNYYGTSIDSVR	NNYYGTSIDSVR	2	NNYYGTSIDSVR2	38941.2	39223.5	46932.7
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	NPAASDYVEVK	NPAASDYVEVK	2	NPAASDYVEVK2	4486.69	4821.05	7493.63
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	NPACGPQWEMSEWSECTAK	NPAC(UniMod:4)GPQWEMSEWSEC(UniMod:4)TAK	3	NPAC(UniMod:4)GPQWEMSEWSEC(UniMod:4)TAK3	73417.6	87138	71712.1
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	NPADLPK	NPADLPK	1	NPADLPK1	6136.21	10518.2	4216.85
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	NPAFKPVLAVIQAGDDHLMQNVNQNLAK	NPAFKPVLAVIQAGDDHLMQNVNQNLAK	4	NPAFKPVLAVIQAGDDHLMQNVNQNLAK4	6651.65	11884.3	
P23965	P23965	ECI1_RAT	Eci1	Enoyl-CoA delta isomerase 1, mitochondrial	1	NPAHYAEYWK	NPAHYAEYWK	3	NPAHYAEYWK3	9244.95	7173.39	11557.8
B0BN65	B0BN65	B0BN65_RAT	Cyria	CYFIP related Rac1 interactor A	1	NPAIQNDFSYYR	NPAIQNDFSYYR	2	NPAIQNDFSYYR2	13998	15114.8	9719.7
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	NPALWDLGIIQAK	NPALWDLGIIQAK	2	NPALWDLGIIQAK2			4551.59
Q1HAQ0	Q1HAQ0	PCAT1_RAT	Lpcat1	Lysophosphatidylcholine acyltransferase 1	1	NPALYASNVR	NPALYASNVR	2	NPALYASNVR2	11804.3	13046.2	13840
Q9R0I6	Q9R0I6	XIAP_RAT	Xiap	E3 ubiquitin-protein ligase XIAP	1	NPAMCSEEAR	NPAMC(UniMod:4)SEEAR	2	NPAMC(UniMod:4)SEEAR2	4206.63	4488.26	4111.16
Q9JJP9	Q9JJP9;D4A3P1;D4AA63	UBQL1_RAT	Ubqln1	Ubiquilin-1	0	NPAMMQEMMR	NPAMMQEMMR	2	NPAMMQEMMR2	23099.8	19256.2	24483.3
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	NPAQPLLGDAR	NPAQPLLGDAR	2	NPAQPLLGDAR2	27763.1	34462.6	32578.3
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	NPAVLFDSTDVKPNK	NPAVLFDSTDVKPNK	2	NPAVLFDSTDVKPNK2	5315.95	2202.46	2527.69
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	NPAVLFDSTDVKPNK	NPAVLFDSTDVKPNK	3	NPAVLFDSTDVKPNK3	31939.9	30684.1	46480.9
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	NPAVLSAASFDGR	NPAVLSAASFDGR	2	NPAVLSAASFDGR2	77652.9	74711.4	92607.4
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	NPAVYNFTR	NPAVYNFTR	2	NPAVYNFTR2	40099	49122	61922.1
F1MA46	F1MA46	F1MA46_RAT	Pcdh12	Protocadherin 12	1	NPAYEVDVQAR	NPAYEVDVQAR	2	NPAYEVDVQAR2	25216.1	20943.1	22183.9
Q923V4	Q923V4	FBX6_RAT	Fbxo6	F-box only protein 6	1	NPCAEENLR	NPC(UniMod:4)AEENLR	2	NPC(UniMod:4)AEENLR2	50563.5	51551.2	49638.3
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	NPCAMFASGEVK	NPC(UniMod:4)AMFASGEVK	2	NPC(UniMod:4)AMFASGEVK2	22020.3	23421.6	11320.6
P35738	P35738	ODBB_RAT	Bckdhb	2-oxoisovalerate dehydrogenase subunit beta, mitochondrial	1	NPCIFFEPK	NPC(UniMod:4)IFFEPK	2	NPC(UniMod:4)IFFEPK2		3122.42	
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	NPCTDGTHDCNK	NPC(UniMod:4)TDGTHDC(UniMod:4)NK	2	NPC(UniMod:4)TDGTHDC(UniMod:4)NK2			15265.7
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	NPCYTMK	NPC(UniMod:4)YTMK	1	NPC(UniMod:4)YTMK1	189444	224479	237551
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	NPCYTMK	NPC(UniMod:4)YTMK	2	NPC(UniMod:4)YTMK2	4.25201e+06	5.02864e+06	5.62008e+06
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	NPDAIGK	NPDAIGK	1	NPDAIGK1	4161.01	2589.46	
F7FMS0	F7FMS0	F7FMS0_RAT	Mst1	Macrophage stimulating 1	1	NPDASERPWCYTTDPNVER	NPDASERPWC(UniMod:4)YTTDPNVER	3	NPDASERPWC(UniMod:4)YTTDPNVER3	14206.2	12205.8	7175.53
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	NPDDITNEEYGEFYK	NPDDITNEEYGEFYK	2	NPDDITNEEYGEFYK2	830667	852243	853512
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	NPDDITNEEYGEFYK	NPDDITNEEYGEFYK	3	NPDDITNEEYGEFYK3	48546.1	48216.1	45914.7
P34058	A0A8I6GLF3;P34058;A0A8I5ZYT7	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	NPDDITQEEYGEFYK	NPDDITQEEYGEFYK	2	NPDDITQEEYGEFYK2	343374	340117	288424
P34058	A0A8I6GLF3;P34058;A0A8I5ZYT7	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	NPDDITQEEYGEFYK	NPDDITQEEYGEFYK	3	NPDDITQEEYGEFYK3	70305.1	75236.4	88875
Q6TUG0	Q6TUG0	DJB11_RAT	Dnajb11	DnaJ homolog subfamily B member 11	1	NPDDPQAQEK	NPDDPQAQEK	2	NPDDPQAQEK2			3788.85
D4A7L4	D4A7L4	D4A7L4_RAT	Ndufb11	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial	1	NPDFHGYDSDPVVDVWNMR	NPDFHGYDSDPVVDVWNMR	3	NPDFHGYDSDPVVDVWNMR3	9339.83	8831.04	11047.9
P58751	P58751	RELN_RAT	Reln	Reelin	1	NPDFLKDDFEGQLESDR	NPDFLKDDFEGQLESDR	3	NPDFLKDDFEGQLESDR3	2889.06	3342.6	6462.19
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	NPDGDHKPWCFVK	NPDGDHKPWC(UniMod:4)FVK	2	NPDGDHKPWC(UniMod:4)FVK2	103339	67739.4	72494.1
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	NPDGDHKPWCFVK	NPDGDHKPWC(UniMod:4)FVK	3	NPDGDHKPWC(UniMod:4)FVK3	1.21431e+06	1.33583e+06	1.29524e+06
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	NPDGDHKPWCFVK	NPDGDHKPWC(UniMod:4)FVK	4	NPDGDHKPWC(UniMod:4)FVK4	742360	723767	767544
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	NPDGDVNGPWCYTMNPR	NPDGDVNGPWC(UniMod:4)YTMNPR	3	NPDGDVNGPWC(UniMod:4)YTMNPR3	239501	220016	233693
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	NPDGEPRPWCFTTDPNK	NPDGEPRPWC(UniMod:4)FTTDPNK	3	NPDGEPRPWC(UniMod:4)FTTDPNK3	1.06647e+06	858438	933703
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	NPDGEPRPWCFTTDPNKR	NPDGEPRPWC(UniMod:4)FTTDPNKR	3	NPDGEPRPWC(UniMod:4)FTTDPNKR3	86505.8	75362.3	59677.1
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	NPDGEPRPWCFTTDPNKR	NPDGEPRPWC(UniMod:4)FTTDPNKR	4	NPDGEPRPWC(UniMod:4)FTTDPNKR4	310485	292361	279898
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	NPDGETAPWCYTTDSQLR	NPDGETAPWC(UniMod:4)YTTDSQLR	3	NPDGETAPWC(UniMod:4)YTTDSQLR3	289738	242398	237698
F7FMS0	F7FMS0	F7FMS0_RAT	Mst1	Macrophage stimulating 1	1	NPDGSEAPWCFTSR	NPDGSEAPWC(UniMod:4)FTSR	2	NPDGSEAPWC(UniMod:4)FTSR2	7338.29	8673.39	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	NPDHVLK	NPDHVLK	2	NPDHVLK2	4677.76	7565.08	
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	NPDIFTEVANCCIR	NPDIFTEVANC(UniMod:4)C(UniMod:4)IR	2	NPDIFTEVANC(UniMod:4)C(UniMod:4)IR2	19139.5	20662	24756.3
P05545	A0A0G2JSK1;P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	0	NPDKNVVFSPLSISAALAILSLGAK	NPDKNVVFSPLSISAALAILSLGAK	3	NPDKNVVFSPLSISAALAILSLGAK3		2279.7	3726.54
P05545	A0A0G2JSK1;P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	0	NPDKNVVFSPLSISAALAILSLGAK	NPDKNVVFSPLSISAALAILSLGAK	4	NPDKNVVFSPLSISAALAILSLGAK4			2373.62
Q63556	Q63556	SPA3M_RAT	Serpina3m	Serine protease inhibitor A3M (Fragment)	1	NPDKNVVFSPLSISAALAIVSLGAK	NPDKNVVFSPLSISAALAIVSLGAK	3	NPDKNVVFSPLSISAALAIVSLGAK3	5582.02	10656.4	6098.8
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	NPDKNVVFSPLSISAALAVVSLGAK	NPDKNVVFSPLSISAALAVVSLGAK	3	NPDKNVVFSPLSISAALAVVSLGAK3	15872.2		
P05544	P05544	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	1	NPDKNVVFSPLSISAALTILSLGAK	NPDKNVVFSPLSISAALTILSLGAK	3	NPDKNVVFSPLSISAALTILSLGAK3		8234.62	8716.83
G3V6U9	G3V6U9	SETD3_RAT	Setd3	Actin-histidine N-methyltransferase	1	NPDLSVR	NPDLSVR	2	NPDLSVR2	18384.6	9384.61	7658.46
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	NPDMVAGEK	NPDMVAGEK	2	NPDMVAGEK2	14554.7	21423.5	11395.9
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	NPDNDEQGPWCYTTDPDQR	NPDNDEQGPWC(UniMod:4)YTTDPDQR	3	NPDNDEQGPWC(UniMod:4)YTTDPDQR3	211482	176329	185428
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	NPDNDQR	NPDNDQR	2	NPDNDQR2		2611.83	3361.42
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	NPDNDQRGPWCFTTDPSVR	NPDNDQRGPWC(UniMod:4)FTTDPSVR	3	NPDNDQRGPWC(UniMod:4)FTTDPSVR3	46912.9	26228.3	51358.9
A0A8I5ZXB9	A0A8I5ZXB9	A0A8I5ZXB9_RAT	Kifap3	Kinesin-associated protein 3	1	NPDNLEELLLNETALGALAR	NPDNLEELLLNETALGALAR	3	NPDNLEELLLNETALGALAR3	1630.52		2258.43
P20673	P20673	ARLY_RAT	Asl	Argininosuccinate lyase	1	NPDSLELIR	NPDSLELIR	2	NPDSLELIR2	2899.7	8692.36	11340
P18292	P18292	THRB_RAT	F2	Prothrombin	1	NPDSSTSGPWCYTTDPTVR	NPDSSTSGPWC(UniMod:4)YTTDPTVR	3	NPDSSTSGPWC(UniMod:4)YTTDPTVR3	51953.5	52090	60150.3
P18292	P18292	THRB_RAT	F2	Prothrombin	1	NPDSSTSGPWCYTTDPTVR	NPDSSTSGPWC(UniMod:4)YTTDPTVR	4	NPDSSTSGPWC(UniMod:4)YTTDPTVR4	39045.3	47184.8	44714.3
P18292	P18292	THRB_RAT	F2	Prothrombin	1	NPDSSTSGPWCYTTDPTVRR	NPDSSTSGPWC(UniMod:4)YTTDPTVRR	3	NPDSSTSGPWC(UniMod:4)YTTDPTVRR3	286208	557209	702682
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	NPDTIAAWYLR	NPDTIAAWYLR	2	NPDTIAAWYLR2	5.08542e+06	6.2693e+06	6.02038e+06
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	NPDTIAAWYLR	NPDTIAAWYLR	3	NPDTIAAWYLR3	371291	487635	479004
D3ZU83	D3ZU83	D3ZU83_RAT	Ergic3	Endoplasmic reticulum-Golgi intermediate compartment protein	1	NPDTIEQCR	NPDTIEQC(UniMod:4)R	2	NPDTIEQC(UniMod:4)R2	15011.6	11629.8	17446.5
P61314	P61314;A0A8I5ZY58;A0A8I6A471	RL15_RAT	Rpl15	Large ribosomal subunit protein eL15	0	NPDTQWITKPVHK	NPDTQWITKPVHK	3	NPDTQWITKPVHK3	3511.12	3481.44	
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	NPDVEKDCPTIIHFVLANINFR	NPDVEKDC(UniMod:4)PTIIHFVLANINFR	3	NPDVEKDC(UniMod:4)PTIIHFVLANINFR3	8330.37	15140.7	12006.9
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	NPDVEKDCPTIIHFVLANINFR	NPDVEKDC(UniMod:4)PTIIHFVLANINFR	4	NPDVEKDC(UniMod:4)PTIIHFVLANINFR4	53744.1	52368.9	47171.8
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	NPDVGLKPVWYSPK	NPDVGLKPVWYSPK	2	NPDVGLKPVWYSPK2		2775.78	
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	NPDVGLKPVWYSPK	NPDVGLKPVWYSPK	3	NPDVGLKPVWYSPK3	34843	19529.3	34232.9
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	NPDVLYPSLNIGSFDLAVPEK	NPDVLYPSLNIGSFDLAVPEK	3	NPDVLYPSLNIGSFDLAVPEK3	40019	37941	47077.2
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	NPEATFLK	NPEATFLK	2	NPEATFLK2	13241.5	14919.9	17015.4
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	NPEDPVEVPGGFLSDLNPASLQVIK	NPEDPVEVPGGFLSDLNPASLQVIK	3	NPEDPVEVPGGFLSDLNPASLQVIK3	6616.34	9006.74	6126.91
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	NPEEAELEDTLNQVMVVFK	NPEEAELEDTLNQVMVVFK	3	NPEEAELEDTLNQVMVVFK3		7796.34	3057.75
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	NPEEAIGALDFTLSR	NPEEAIGALDFTLSR	2	NPEEAIGALDFTLSR2	16060.8	12328	14435
O08816	O08816	WASL_RAT	Wasl	Actin nucleation-promoting factor WASL	1	NPEITTNR	NPEITTNR	2	NPEITTNR2	4637.36	3324.39	
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	NPEIVFVADMTR	NPEIVFVADMTR	2	NPEIVFVADMTR2	40635.7	46370.8	45450.4
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	NPELQNLLLDDFFK	NPELQNLLLDDFFK	2	NPELQNLLLDDFFK2	7310.93	13808.5	6070.29
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	NPELQNLLLDDFFK	NPELQNLLLDDFFK	3	NPELQNLLLDDFFK3	1093.77		
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	NPELVPQNYIAASPSQSVVQHLR	NPELVPQNYIAASPSQSVVQHLR	3	NPELVPQNYIAASPSQSVVQHLR3	13144.6	13316.8	7623.33
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	NPENWAYYK	NPENWAYYK	2	NPENWAYYK2	31287.9	48820.5	30612
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	NPEPELLVR	NPEPELLVR	2	NPEPELLVR2	427121	436584	449252
D3ZIS7	D3ZIS7	D3ZIS7_RAT	C18h5orf46	Similar to AVLV472	1	NPEPGFPK	NPEPGFPK	2	NPEPGFPK2	9935.09		10529.2
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	NPEQNPCSVHAQCIEER	NPEQNPC(UniMod:4)SVHAQC(UniMod:4)IEER	3	NPEQNPC(UniMod:4)SVHAQC(UniMod:4)IEER3	4.68685e+06	5.46926e+06	5.22365e+06
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	NPEQVDLYQFMAK	NPEQVDLYQFMAK	2	NPEQVDLYQFMAK2	5705.84	7322.74	11846
D3ZE05	D3ZE05	D3ZE05_RAT	Cilp2	Cartilage intermediate layer protein 2	1	NPERPGASAACVEFK	NPERPGASAAC(UniMod:4)VEFK	3	NPERPGASAAC(UniMod:4)VEFK3	25415.3	29390.2	19707.8
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	NPESWAK	NPESWAK	2	NPESWAK2	75354	83557.6	51444.1
P36953	P36953	AFAM_RAT	Afm	Afamin	1	NPFAFAPVLLNVAAR	NPFAFAPVLLNVAAR	2	NPFAFAPVLLNVAAR2	26612	24880.1	28432.7
P36953	P36953	AFAM_RAT	Afm	Afamin	1	NPFAFAPVLLNVAAR	NPFAFAPVLLNVAAR	3	NPFAFAPVLLNVAAR3	5156.64	2774.88	2426.83
P69478	P69478	CHSTB_RAT	Chst11	Carbohydrate sulfotransferase 11	1	NPFGVDICCR	NPFGVDIC(UniMod:4)C(UniMod:4)R	2	NPFGVDIC(UniMod:4)C(UniMod:4)R2	7768.28	4059.97	8762.52
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	NPFLAAVTANR	NPFLAAVTANR	2	NPFLAAVTANR2	76473.9	67803	59315.1
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	NPFPALQTLR	NPFPALQTLR	2	NPFPALQTLR2	11331	23647	15775.7
A0A8I6AUQ7	A0A8I6AUQ7	A0A8I6AUQ7_RAT	Zpr1	ZPR1 zinc finger	1	NPFTLGDSSNPDQSEK	NPFTLGDSSNPDQSEK	2	NPFTLGDSSNPDQSEK2	2276.57	1686.49	
Q1HAQ0	Q1HAQ0	PCAT1_RAT	Lpcat1	Lysophosphatidylcholine acyltransferase 1	1	NPFVHELR	NPFVHELR	2	NPFVHELR2	21822.5	12208.5	12094.2
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	NPFVLGANLNGGER	NPFVLGANLNGGER	2	NPFVLGANLNGGER2	11587	17997.1	10818.3
A0A0G2K7U7	A0A0G2K7U7	A0A0G2K7U7_RAT	Ankrd27	Ankyrin repeat domain 27	1	NPFYLALQK	NPFYLALQK	2	NPFYLALQK2	3681.49	5790.08	3287.61
Q69BT7	Q69BT7	TPPC4_RAT	Trappc4	Trafficking protein particle complex subunit 4	1	NPFYSLEMPIR	NPFYSLEMPIR	2	NPFYSLEMPIR2	37158.3	29027.3	18309.3
Q63530	Q63530	PTER_RAT	Pter	Phosphotriesterase-related protein	1	NPGAPFQIIR	NPGAPFQIIR	2	NPGAPFQIIR2	10741.1	8505.12	11455
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	NPGDLQNGK	NPGDLQNGK	1	NPGDLQNGK1	90238.7	89436.9	83183.5
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	NPGDLQNGK	NPGDLQNGK	2	NPGDLQNGK2	3.89392e+06	3.5651e+06	4.19035e+06
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	NPGMGNGDDEAAELMQQVK	NPGMGNGDDEAAELMQQVK	3	NPGMGNGDDEAAELMQQVK3	6373.3	5115.27	
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	NPGNQAAYEHFETMK	NPGNQAAYEHFETMK	2	NPGNQAAYEHFETMK2	46134.1	53231.2	67403.7
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	NPGNQAAYEHFETMK	NPGNQAAYEHFETMK	3	NPGNQAAYEHFETMK3	220759	204246	215146
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	NPGPGDLFTPVCLQTGEYVR	NPGPGDLFTPVC(UniMod:4)LQTGEYVR	3	NPGPGDLFTPVC(UniMod:4)LQTGEYVR3		19209.2	23763.9
G3V7P1	G3V7P1	STX12_RAT	Stx12	Syntaxin-12	1	NPGPSGPQPR	NPGPSGPQPR	2	NPGPSGPQPR2	155463	141065	182944
O35964	O35964	SH3G1_RAT	Sh3gl1	Endophilin-A2	1	NPGYPQSEGLLGECMVR	NPGYPQSEGLLGEC(UniMod:4)MVR	2	NPGYPQSEGLLGEC(UniMod:4)MVR2	112307	95362	119136
O35964	O35964	SH3G1_RAT	Sh3gl1	Endophilin-A2	1	NPGYPQSEGLLGECMVR	NPGYPQSEGLLGEC(UniMod:4)MVR	3	NPGYPQSEGLLGEC(UniMod:4)MVR3	27627.1	43164	36483.5
D3ZMQ3	D3ZMQ3	D3ZMQ3_RAT	Itga4	Integrin subunit alpha 4	1	NPHTTEVVGGAPQHEQIGK	NPHTTEVVGGAPQHEQIGK	4	NPHTTEVVGGAPQHEQIGK4	7144.63	4341.46	6789.24
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	NPHVALYALEVMESVVK	NPHVALYALEVMESVVK	3	NPHVALYALEVMESVVK3	1362.67	765.683	3330.05
P0CH38	P0CH38	FBSP1_RAT	Fbxo45	F-box/SPRY domain-containing protein 1 (Fragment)	1	NPIAQSTDGAR	NPIAQSTDGAR	2	NPIAQSTDGAR2	26942.8	11752.8	26569.2
Q6IE70	Q6IE70	PAN2_RAT	Pan2	PAN2-PAN3 deadenylation complex catalytic subunit Pan2	1	NPIEASVLLAEASLAR	NPIEASVLLAEASLAR	2	NPIEASVLLAEASLAR2	6966.18	2104.31	4075.83
B2RYW9	B2RYW9	FAHD2_RAT	Fahd2	Fumarylacetoacetate hydrolase domain-containing protein 2	1	NPIIFSK	NPIIFSK	2	NPIIFSK2	58800	51884.5	47806.1
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	NPILWNVADVVIK	NPILWNVADVVIK	2	NPILWNVADVVIK2	3166.82	1871.3	1168.09
Q9WUH4	Q9WUH4;Q4FZR8	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	0	NPITGFGK	NPITGFGK	1	NPITGFGK1	10671.8	4923.19	6527.27
Q9WUH4	Q9WUH4;Q4FZR8	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	0	NPITGFGK	NPITGFGK	2	NPITGFGK2	379892	317289	393875
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	NPITNALVR	NPITNALVR	2	NPITNALVR2	169870	158555	169754
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	NPKEPLISGWLFFR	NPKEPLISGWLFFR	3	NPKEPLISGWLFFR3	3497.77		3452.63
Q5XIP2	Q5XIP2	Q5XIP2_RAT	Pigk	GPI-anchor transamidase	1	NPKPATVFSHK	NPKPATVFSHK	3	NPKPATVFSHK3	3982.32		
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	NPLGCSSCYCFGVTSQCSEAK	NPLGC(UniMod:4)SSC(UniMod:4)YC(UniMod:4)FGVTSQC(UniMod:4)SEAK	3	NPLGC(UniMod:4)SSC(UniMod:4)YC(UniMod:4)FGVTSQC(UniMod:4)SEAK3	7422.37	4339.9	7507.42
A0A8I6AGS4	A0A8I6AGS4	A0A8I6AGS4_RAT	Abi3bp	ABI family member 3 binding protein	1	NPLGEGPASNTVAFSTESADPR	NPLGEGPASNTVAFSTESADPR	3	NPLGEGPASNTVAFSTESADPR3	14036.1	10837.1	9408.19
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	NPLGNVGLLIGEASK	NPLGNVGLLIGEASK	2	NPLGNVGLLIGEASK2	32057.5	32927.2	37106.6
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	NPLGNVGLLIGEASK	NPLGNVGLLIGEASK	3	NPLGNVGLLIGEASK3	6394.48	4569.72	8754.31
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	NPLGSTHPEATLK	NPLGSTHPEATLK	2	NPLGSTHPEATLK2	5293.09	3672.88	4394.09
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	NPLGSTHPEATLK	NPLGSTHPEATLK	3	NPLGSTHPEATLK3	77513.9	74658.2	73056.9
M0R8K2	M0R8K2	M0R8K2_RAT	Snrpd2l	Small nuclear ribonucleoprotein Sm D2	1	NPLIAGK	NPLIAGK	1	NPLIAGK1	7807.14	7045.44	12750.9
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	NPLLYLTGIQTDK	NPLLYLTGIQTDK	2	NPLLYLTGIQTDK2	47980.5	55987.4	45151.2
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	NPLLYLTGIQTDK	NPLLYLTGIQTDK	3	NPLLYLTGIQTDK3		3048.09	
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	NPLPEYLSR	NPLPEYLSR	2	NPLPEYLSR2	274665	299889	302617
P62329	P62329;A0A0G2K021	TYB4_RAT	Tmsb4x	Thymosin beta-4	0	NPLPSKETIEQEK	NPLPSKETIEQEK	2	NPLPSKETIEQEK2	133785	142030	128660
P62329	P62329;A0A0G2K021	TYB4_RAT	Tmsb4x	Thymosin beta-4	0	NPLPSKETIEQEK	NPLPSKETIEQEK	3	NPLPSKETIEQEK3	566951	810874	823017
F7FLB2	F7FLB2	F7FLB2_RAT	Pgm2	phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	1	NPLTSESVK	NPLTSESVK	2	NPLTSESVK2	3633.63	3567.32	1808.99
D4A4T0	D4A4T0	D4A4T0_RAT	Stub1	STIP1 homology and U-box containing protein 1	1	NPLVAVYYTNR	NPLVAVYYTNR	2	NPLVAVYYTNR2	24194.6	12630.6	11221.9
P22273	P22273	IL6RA_RAT	Il6r	Interleukin-6 receptor subunit alpha	1	NPLVNAFCEWHPSSTPSPTTK	NPLVNAFC(UniMod:4)EWHPSSTPSPTTK	3	NPLVNAFC(UniMod:4)EWHPSSTPSPTTK3	21912.1	27356.6	24195.7
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	NPLYVEKPK	NPLYVEKPK	2	NPLYVEKPK2	7228.2	5271.22	12869.5
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	NPMVETLGTVLQLK	NPMVETLGTVLQLK	2	NPMVETLGTVLQLK2	14554.2	15756.6	18777.7
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	NPMVETLGTVLQLK	NPMVETLGTVLQLK	3	NPMVETLGTVLQLK3	4753.82	13748	5931.03
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	NPNAMLVNLEEALAPTYQDVLYQAK	NPNAMLVNLEEALAPTYQDVLYQAK	3	NPNAMLVNLEEALAPTYQDVLYQAK3	9491.63	15943.9	10122.2
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	NPNASEPK	NPNASEPK	1	NPNASEPK1			4931.83
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	NPNASEPK	NPNASEPK	2	NPNASEPK2			23814.9
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	NPNAVLTCVDDSLSQEYQK	NPNAVLTC(UniMod:4)VDDSLSQEYQK	3	NPNAVLTC(UniMod:4)VDDSLSQEYQK3	41951.5	46965.1	33863.1
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	NPNDDLTAVDGKPEGWK	NPNDDLTAVDGKPEGWK	2	NPNDDLTAVDGKPEGWK2	19934.8	23490.7	22204.5
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	NPNDDLTAVDGKPEGWK	NPNDDLTAVDGKPEGWK	3	NPNDDLTAVDGKPEGWK3	945017	873810	946484
F1LW77	F1LW77	F1LW77_RAT	Rab33b	RAB33B, member RAS oncogene family	1	NPNDNDHVEAIFMTLAHK	NPNDNDHVEAIFMTLAHK	4	NPNDNDHVEAIFMTLAHK4	8384.68	10606.4	8802.73
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	NPNFATCVK	NPNFATC(UniMod:4)VK	2	NPNFATC(UniMod:4)VK2	65852.3	63187.6	65150.5
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	NPNGTDPIQK	NPNGTDPIQK	2	NPNGTDPIQK2	50085.1	36912.1	33769.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	NPNGYLLSLPVQELTDR	NPNGYLLSLPVQELTDR	2	NPNGYLLSLPVQELTDR2	235848	267557	185995
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	NPNGYLLSLPVQELTDR	NPNGYLLSLPVQELTDR	3	NPNGYLLSLPVQELTDR3	84790.4	135296	132988
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	NPNQEPIPIVLR	NPNQEPIPIVLR	2	NPNQEPIPIVLR2	26122.9	21873	26056.9
Q07205	Q07205;A0A8I6ADE0;A0A8I6AVQ3;A0A8I5ZMQ1	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	NPPENSDIGTGK	NPPENSDIGTGK	2	NPPENSDIGTGK2	29535	22962.2	12693.8
A0A8I5ZSN8;A0A8I6A2P1	A0A8I5ZSN8;A0A8I6A2P1	A0A8I5ZSN8_RAT;A0A8I6A2P1_RAT	AABR07026797.1;Srsf3	RRM domain-containing protein	0	NPPGFAFVEFEDPRDAADAVR	NPPGFAFVEFEDPRDAADAVR	3	NPPGFAFVEFEDPRDAADAVR3	17511.9	12504.9	24943
A0A8I6AFZ5	A0A8I6AFZ5	A0A8I6AFZ5_RAT	Srsf7	Serine and arginine rich splicing factor 7	1	NPPGFAFVEFEDPRDAEDAVR	NPPGFAFVEFEDPRDAEDAVR	3	NPPGFAFVEFEDPRDAEDAVR3	60469.8	48655.6	39789.3
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	NPPGHPQEYK	NPPGHPQEYK	2	NPPGHPQEYK2			74522
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	NPPGHPQEYK	NPPGHPQEYK	3	NPPGHPQEYK3			188006
F7FQB8	A0A8I5ZWC6;F7FQB8	F7FQB8_RAT	Kpna4	Karyopherin subunit alpha 4	0	NPPIDDLIK	NPPIDDLIK	2	NPPIDDLIK2	152507	149087	143190
Q4KLF8	Q4KLF8	ARPC5_RAT	Arpc5	Actin-related protein 2/3 complex subunit 5	1	NPPINTK	NPPINTK	1	NPPINTK1	19324	18629.5	
Q4KLF8	Q4KLF8	ARPC5_RAT	Arpc5	Actin-related protein 2/3 complex subunit 5	1	NPPINTK	NPPINTK	2	NPPINTK2	53312.4	16388.4	
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	NPPQGSYIYQK	NPPQGSYIYQK	2	NPPQGSYIYQK2	18910.9	27114.2	26975.8
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	NPPQTEHTEHT	NPPQTEHTEHT	2	NPPQTEHTEHT2			10052.2
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	NPPQTEHTEHT	NPPQTEHTEHT	3	NPPQTEHTEHT3			11430.5
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	NPPSSDELDGIIK	NPPSSDELDGIIK	2	NPPSSDELDGIIK2	38936.2	39040.5	31702
Q3MHS7	Q3MHS7	Q3MHS7_RAT	Gmds	GDP-mannose 4,6-dehydratase	1	NPQAHIEGNMK	NPQAHIEGNMK	2	NPQAHIEGNMK2	1673.55	2864.32	
Q3MHS7	Q3MHS7	Q3MHS7_RAT	Gmds	GDP-mannose 4,6-dehydratase	1	NPQAHIEGNMK	NPQAHIEGNMK	3	NPQAHIEGNMK3	4343.77	3459.43	3360.17
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	NPQAQPGEEWLQVDLGTPK	NPQAQPGEEWLQVDLGTPK	3	NPQAQPGEEWLQVDLGTPK3	33540.6	38346.8	43057.9
A0A8I6AHW4	A0A8I6AHW4	A0A8I6AHW4_RAT	Ppp1r3f	Protein phosphatase 1 regulatory subunit 3F	1	NPQEEGDIPR	NPQEEGDIPR	2	NPQEEGDIPR2	1261.12		2182.06
B5DEP5	B5DEP5	B5DEP5_RAT	Trip4	Thyroid hormone receptor interactor 4	1	NPQEMVVK	NPQEMVVK	2	NPQEMVVK2	30371.4	17766.8	16582.4
D3ZES7	D3ZPX4;A0A8I6AGW9;D3ZWP6;D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	0	NPQFVFDIHK	NPQFVFDIHK	2	NPQFVFDIHK2	28131.5	18311	13260.9
D3ZES7	D3ZPX4;A0A8I6AGW9;D3ZWP6;D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	0	NPQFVFDIHK	NPQFVFDIHK	3	NPQFVFDIHK3	27750.2	25924.9	38849
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	NPQMGDPASLDHK	NPQMGDPASLDHK	2	NPQMGDPASLDHK2	6131.95	9184.3	8160.98
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	NPQMGDPASLDHK	NPQMGDPASLDHK	3	NPQMGDPASLDHK3	75656.5	86106.9	77195.5
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	NPQMGDPGSLQPK	NPQMGDPGSLQPK	2	NPQMGDPGSLQPK2	353734	304962	326585
D3ZDZ1	D3ZDZ1	D3ZDZ1_RAT	Apbb1ip	Amyloid beta precursor protein binding family B member 1 interacting protein	1	NPQNFYLDNK	NPQNFYLDNK	2	NPQNFYLDNK2	5465.21	3181.04	6883.23
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	NPQSYLYLVK	NPQSYLYLVK	2	NPQSYLYLVK2	121804	162784	125710
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	NPQVCGPGR	NPQVC(UniMod:4)GPGR	2	NPQVC(UniMod:4)GPGR2	200439	199497	192328
Q5XIP9	Q5XIP9	TMM43_RAT	Tmem43	Transmembrane protein 43	1	NPSAMAVESFTATAPFVQIGR	NPSAMAVESFTATAPFVQIGR	3	NPSAMAVESFTATAPFVQIGR3	20605.4	23305.5	32786.1
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	NPSEPVPQAPALWIETTAYGLLHLLLR	NPSEPVPQAPALWIETTAYGLLHLLLR	4	NPSEPVPQAPALWIETTAYGLLHLLLR4	443453	10502	4135.49
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	NPSEPVPQAPALWIETTAYGLLHLLLREGK	NPSEPVPQAPALWIETTAYGLLHLLLREGK	4	NPSEPVPQAPALWIETTAYGLLHLLLREGK4	16243	235018	290982
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	NPSGSGPPLSIEDLGLNFQFCPSSR	NPSGSGPPLSIEDLGLNFQFC(UniMod:4)PSSR	3	NPSGSGPPLSIEDLGLNFQFC(UniMod:4)PSSR3	3386.8	3575.67	1931.84
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	NPSISQTLLSPEK	NPSISQTLLSPEK	2	NPSISQTLLSPEK2	16633.2	13441.8	19548
D3ZF11	D3ZF11	D3ZF11_RAT	Lamtor5	Ragulator complex protein LAMTOR5	1	NPSIVGVLCTDSQGLNLGCR	NPSIVGVLC(UniMod:4)TDSQGLNLGC(UniMod:4)R	3	NPSIVGVLC(UniMod:4)TDSQGLNLGC(UniMod:4)R3	13033.8	7532.27	18083.1
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	NPSLPWLR	NPSLPWLR	2	NPSLPWLR2	14173.6	13884.2	25177.4
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	NPSSAVPPLAGSVK	NPSSAVPPLAGSVK	2	NPSSAVPPLAGSVK2	4640.21		6923.5
Q99MI5	Q99MI5	Q99MI5_RAT	Srm	Spermidine synthase	1	NPSTNFREPVQQLTQAQVEQMQLK	NPSTNFREPVQQLTQAQVEQMQLK	3	NPSTNFREPVQQLTQAQVEQMQLK3	1843.61	3019.81	3590.51
Q5I0D7	Q5I0D7	PEPD_RAT	Pepd	Xaa-Pro dipeptidase	1	NPSVLLTLR	NPSVLLTLR	2	NPSVLLTLR2	21075.8	15188.5	12002.2
Q498R3	Q498R3	DJC10_RAT	Dnajc10	DnaJ homolog subfamily C member 10	1	NPSVVSLTPTTFNELVK	NPSVVSLTPTTFNELVK	2	NPSVVSLTPTTFNELVK2			3468.04
Q80VJ4	Q80VJ4	GPCP1_RAT	Gpcpd1	Glycerophosphocholine phosphodiesterase GPCPD1	1	NPSYVQEAK	NPSYVQEAK	2	NPSYVQEAK2	8575.77	8020.37	7882.88
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	NPTDACQLNYDMHNPFDICAASYR	NPTDAC(UniMod:4)QLNYDMHNPFDIC(UniMod:4)AASYR	3	NPTDAC(UniMod:4)QLNYDMHNPFDIC(UniMod:4)AASYR3	12852	11482.7	4829.21
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	NPTDACQLNYDMHNPFDICAASYRPIYR	NPTDAC(UniMod:4)QLNYDMHNPFDIC(UniMod:4)AASYRPIYR	4	NPTDAC(UniMod:4)QLNYDMHNPFDIC(UniMod:4)AASYRPIYR4	166247	178771	141361
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	NPTFMCLALHCIANVGSR	NPTFMC(UniMod:4)LALHC(UniMod:4)IANVGSR	3	NPTFMC(UniMod:4)LALHC(UniMod:4)IANVGSR3		8638.55	6716.9
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	NPTFMGLALHCIANVGSR	NPTFMGLALHC(UniMod:4)IANVGSR	3	NPTFMGLALHC(UniMod:4)IANVGSR3	14723.2	15558.9	5728.28
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	NPTGDPIPPR	NPTGDPIPPR	2	NPTGDPIPPR2		2516.86	5906.17
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	NPTGSITSR	NPTGSITSR	2	NPTGSITSR2	55201.6	45435.4	48194.1
F1LM81	F1LM81	TM1L1_RAT	Tom1l1	TOM1-like protein 1	1	NPTISLVPEQIGK	NPTISLVPEQIGK	2	NPTISLVPEQIGK2		8966.39	
Q9WUQ1	Q9WUQ1	ATS1_RAT	Adamts1	A disintegrin and metalloproteinase with thrombospondin motifs 1	1	NPTPQGAGKPTGPGSIR	NPTPQGAGKPTGPGSIR	3	NPTPQGAGKPTGPGSIR3	4327.5	9148.79	
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	NPTSGPCSPK	NPTSGPC(UniMod:4)SPK	2	NPTSGPC(UniMod:4)SPK2	48466.2	1.86805e+07	49966.1
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	NPTSGPCSPKK	NPTSGPC(UniMod:4)SPKK	2	NPTSGPC(UniMod:4)SPKK2			22274.3
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	NPTSGPCSPKK	NPTSGPC(UniMod:4)SPKK	3	NPTSGPC(UniMod:4)SPKK3			24083.7
P30836	P30836	LYAM1_RAT	Sell	L-selectin	1	NPTYYWIGIR	NPTYYWIGIR	2	NPTYYWIGIR2	38586	30584.7	36706.6
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	NPVGYPLAWK	NPVGYPLAWK	2	NPVGYPLAWK2	34708.9	35206.4	38252.3
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	NPVIAQK	NPVIAQK	1	NPVIAQK1	2354.15	3094.33	849.803
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	NPVIAQK	NPVIAQK	2	NPVIAQK2	92133.5	55985.4	66358.6
Q9JK66	Q9JK66	PRKN_RAT	Prkn	E3 ubiquitin-protein ligase parkin	1	NPVLVFQCNHR	NPVLVFQC(UniMod:4)NHR	3	NPVLVFQC(UniMod:4)NHR3	3780.67	1920.14	
A0A8I6GLU8	A0A8I6GLU8	A0A8I6GLU8_RAT	Tardbp	TAR DNA-binding protein 43	1	NPVSQCMR	NPVSQC(UniMod:4)MR	2	NPVSQC(UniMod:4)MR2	5080.25	4557.11	3112.65
P28042	P28042	SSBP_RAT	Ssbp1	Single-stranded DNA-binding protein, mitochondrial	1	NPVTIFSLATNEMWR	NPVTIFSLATNEMWR	2	NPVTIFSLATNEMWR2	8181.04	14971.2	16261.9
P28042	P28042	SSBP_RAT	Ssbp1	Single-stranded DNA-binding protein, mitochondrial	1	NPVTIFSLATNEMWR	NPVTIFSLATNEMWR	3	NPVTIFSLATNEMWR3	1632.04	3721.07	3619.53
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	NPVTSVDAAFR	NPVTSVDAAFR	2	NPVTSVDAAFR2	411497	377455	341154
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	NPVTSVDAAFRGPDSVFLIK	NPVTSVDAAFRGPDSVFLIK	3	NPVTSVDAAFRGPDSVFLIK3	9071.56	4636.87	7894.03
Q68FQ2	Q68FQ2	JAM3_RAT	Jam3	Junctional adhesion molecule C	1	NPVVHEFESVELSCIITDSQTNDPR	NPVVHEFESVELSC(UniMod:4)IITDSQTNDPR	3	NPVVHEFESVELSC(UniMod:4)IITDSQTNDPR3	1562.67	4641.08	
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	NPVWYQALTHGLNEEQR	NPVWYQALTHGLNEEQR	3	NPVWYQALTHGLNEEQR3	169229	189407	189473
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	NPVWYQALTHGLNEEQRK	NPVWYQALTHGLNEEQRK	3	NPVWYQALTHGLNEEQRK3	16444		14668.3
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	NPVWYQALTHGLNEEQRK	NPVWYQALTHGLNEEQRK	4	NPVWYQALTHGLNEEQRK4	27129.2	22250.3	21081.4
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	NPWGEVEWK	NPWGEVEWK	2	NPWGEVEWK2	84218.7	93675.3	99550.9
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	NPWGQVEWTGK	NPWGQVEWTGK	2	NPWGQVEWTGK2	2.65162e+06	2.82694e+06	3.17519e+06
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	NPWQEYNYLQK	NPWQEYNYLQK	2	NPWQEYNYLQK2	10932.8	16793.1	13157.1
Q8CHM7	Q8CHM7	HACL1_RAT	Hacl1	2-hydroxyacyl-CoA lyase 1	1	NPWQYPTDSK	NPWQYPTDSK	2	NPWQYPTDSK2		3914.52	
Q6MG06	Q6MG06	GNL1_RAT	Gnl1	Guanine nucleotide-binding protein-like 1	1	NPYALLGEGEC	NPYALLGEGEC(UniMod:4)	2	NPYALLGEGEC(UniMod:4)2	3880.55	4519.93	
Q3B7D0	Q3B7D0	HEM6_RAT	Cpox	Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial	1	NPYAPTMHFNYR	NPYAPTMHFNYR	3	NPYAPTMHFNYR3	15893.9		13300.5
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	NPYEEADHNSLAEIR	NPYEEADHNSLAEIR	3	NPYEEADHNSLAEIR3	7842.09	11038.2	11272.4
P23593	P23593	APOD_RAT	Apod	Apolipoprotein D	1	NPYLPPETITYLK	NPYLPPETITYLK	2	NPYLPPETITYLK2	105752	99415.1	99486.7
Q6WRH9	Q6WRH9	IGS10_RAT	Igsf10	Immunoglobulin superfamily member 10	1	NPYQFGLQK	NPYQFGLQK	2	NPYQFGLQK2	6542.93	6325.84	4683.43
Q68FT3	Q68FT3	PYRD2_RAT	Pyroxd2	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2	1	NPYSFTPMLEEGTLSKPPR	NPYSFTPMLEEGTLSKPPR	3	NPYSFTPMLEEGTLSKPPR3	27734.4	26415	30058.4
P50398	P50398	GDIA_RAT	Gdi1	Rab GDP dissociation inhibitor alpha	1	NPYYGGESSSITPLEELYK	NPYYGGESSSITPLEELYK	3	NPYYGGESSSITPLEELYK3	9869.81		5612.22
P50398	P50398	GDIA_RAT	Gdi1	Rab GDP dissociation inhibitor alpha	1	NPYYGGESSSITPLEELYKR	NPYYGGESSSITPLEELYKR	3	NPYYGGESSSITPLEELYKR3	8478.35	7749.33	10344.4
A0A8I6AIH6	A0A8I6AIH6	A0A8I6AIH6_RAT	Suclg2	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial	1	NQAADQIK	NQAADQIK	2	NQAADQIK2	23240.7	40100	38647.7
A0A8I6GBQ0	A0A8I6GBQ0	A0A8I6GBQ0_RAT	Stk26	Protein kinase domain-containing protein	1	NQAIEELEK	NQAIEELEK	2	NQAIEELEK2	237769	261326	242424
G3V6A6	G3V6A6	G3V6A6_RAT	Chmp1b2	Similar to RIKEN cDNA 2610002M06	1	NQAINFLR	NQAINFLR	2	NQAINFLR2	5340.16	4560.05	
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	NQALFPACVLK	NQALFPAC(UniMod:4)VLK	2	NQALFPAC(UniMod:4)VLK2	7339.34	21590.7	15490.5
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	NQALNTDNYGHDLASVQALQR	NQALNTDNYGHDLASVQALQR	3	NQALNTDNYGHDLASVQALQR3	139616	119330	116598
D4ACF2	D4ACF2	D4ACF2_RAT	Trim21	RING-type E3 ubiquitin transferase	1	NQALQELISELER	NQALQELISELER	2	NQALQELISELER2		5339.44	
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	NQAMADAFER	NQAMADAFER	2	NQAMADAFER2	9836.15	13313.3	19175.7
A0A8I6A4I6	A0A8I6A4I6	A0A8I6A4I6_RAT	ENSRNOG00000067246	RRM domain-containing protein	1	NQAPGQPGASQWGSR	NQAPGQPGASQWGSR	2	NQAPGQPGASQWGSR2	17950.9	9781.65	16934.4
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	NQAPMMMGPPQK	NQAPMMMGPPQK	2	NQAPMMMGPPQK2	46872.3	44078.1	44121.4
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	NQASRPYSFYSSLVSYPEADGGAAPR	NQASRPYSFYSSLVSYPEADGGAAPR	3	NQASRPYSFYSSLVSYPEADGGAAPR3	213072	299292	291052
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	NQATCLDR	NQATC(UniMod:4)LDR	2	NQATC(UniMod:4)LDR2	27568.4	35216.5	25899.5
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	NQATCVDELNSYSCK	NQATC(UniMod:4)VDELNSYSC(UniMod:4)K	2	NQATC(UniMod:4)VDELNSYSC(UniMod:4)K2	12136.6	10534.4	10437.5
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	NQATCVDELNSYSCK	NQATC(UniMod:4)VDELNSYSC(UniMod:4)K	3	NQATC(UniMod:4)VDELNSYSC(UniMod:4)K3		5106.33	5557.55
A0A8I5ZMX2	A0A8I5ZMX2	A0A8I5ZMX2_RAT	Adamts3	ADAM metallopeptidase with thrombospondin type 1, motif 3	1	NQATGHYILNGK	NQATGHYILNGK	3	NQATGHYILNGK3	7479	4237.99	9485.88
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	NQCFGGEYMGEVFDHMMK	NQC(UniMod:4)FGGEYMGEVFDHMMK	3	NQC(UniMod:4)FGGEYMGEVFDHMMK3	74883.9	88317.8	58110.8
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	NQCWGDAVVGEK	NQC(UniMod:4)WGDAVVGEK	2	NQC(UniMod:4)WGDAVVGEK2	6013.67	4821.78	5429.07
Q6AYL5	Q6AYL5	SF3B4_RAT	Sf3b4	Splicing factor 3B subunit 4	1	NQDATVYVGGLDEK	NQDATVYVGGLDEK	2	NQDATVYVGGLDEK2	4821.53		2354.57
Q5M7T1	Q5M7T1	CIAO1_RAT	Ciao1	Probable cytosolic iron-sulfur protein assembly protein CIAO1	1	NQDDFECVTTLEGHENEVK	NQDDFEC(UniMod:4)VTTLEGHENEVK	3	NQDDFEC(UniMod:4)VTTLEGHENEVK3	7405.24	11670.6	8272.19
A0A8I6ACU2	A0A8I6ACU2	A0A8I6ACU2_RAT	Ubap2l	Ubiquitin associated protein 2-like	1	NQDECVIALHDCNGDVNR	NQDEC(UniMod:4)VIALHDC(UniMod:4)NGDVNR	3	NQDEC(UniMod:4)VIALHDC(UniMod:4)NGDVNR3	5116.43	6761.36	6341.89
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	NQDEESQDPPELLK	NQDEESQDPPELLK	2	NQDEESQDPPELLK2	35171.3	66881.4	40400.4
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	NQDEESQDPPELLK	NQDEESQDPPELLK	3	NQDEESQDPPELLK3	6541.23	6515.85	
D3ZJR7	D3ZJR7	D3ZJR7_RAT	Dsc2	Desmocollin 2	1	NQDEGPECIPQTQTVR	NQDEGPEC(UniMod:4)IPQTQTVR	2	NQDEGPEC(UniMod:4)IPQTQTVR2	58297.7	56242.7	62575.7
D3ZJR7	D3ZJR7	D3ZJR7_RAT	Dsc2	Desmocollin 2	1	NQDEGPECIPQTQTVR	NQDEGPEC(UniMod:4)IPQTQTVR	3	NQDEGPEC(UniMod:4)IPQTQTVR3	98210	100632	89508.5
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	NQDFMNVYYQIR	NQDFMNVYYQIR	2	NQDFMNVYYQIR2		3627.1	
Q7TQ20	Q7TQ20	DNJC2_RAT	Dnajc2	DnaJ homolog subfamily C member 2	1	NQDHYAVLGLGHVR	NQDHYAVLGLGHVR	3	NQDHYAVLGLGHVR3	8789.35	1500.98	
Q7TQ20	Q7TQ20	DNJC2_RAT	Dnajc2	DnaJ homolog subfamily C member 2	1	NQDHYAVLGLGHVR	NQDHYAVLGLGHVR	4	NQDHYAVLGLGHVR4	17207.2	4579.29	3125.73
Q5I0H9	Q5I0H9	PDIA5_RAT	Pdia5	Protein disulfide-isomerase A5	1	NQDLCQQESVK	NQDLC(UniMod:4)QQESVK	2	NQDLC(UniMod:4)QQESVK2	3355.78	3798.98	1917.28
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	NQDLEFER	NQDLEFER	2	NQDLEFER2	21448.8	13990.3	18954.5
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	NQDLILENKK	NQDLILENKK	3	NQDLILENKK3	4691.23	2849.6	
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	NQDLSQQLQLLEAEHSTLR	NQDLSQQLQLLEAEHSTLR	3	NQDLSQQLQLLEAEHSTLR3	14516.9	15964.8	15305.4
Q4KM73	Q4KM73	KCY_RAT	Cmpk1	UMP-CMP kinase	1	NQDNLQGWNK	NQDNLQGWNK	2	NQDNLQGWNK2	39416.3	32341.2	42147.8
P70483	P70483	STRN_RAT	Strn	Striatin	1	NQDSVINGTEAEVK	NQDSVINGTEAEVK	2	NQDSVINGTEAEVK2	3201.36		3862.38
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	NQDVHTISLPFFQSLPDYLER	NQDVHTISLPFFQSLPDYLER	3	NQDVHTISLPFFQSLPDYLER3	1.25376e+06	1.26105e+06	1.32196e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	NQDVHTISLPFFQSLPDYLER	NQDVHTISLPFFQSLPDYLER	4	NQDVHTISLPFFQSLPDYLER4	15522.2	14510.9	12050.1
P14630	P14630	APOM_RAT	Apom	Apolipoprotein M	1	NQEACPLSSK	NQEAC(UniMod:4)PLSSK	2	NQEAC(UniMod:4)PLSSK2	431835	398235	447639
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	NQECIALPENICGIGWHLVGNSCLK	NQEC(UniMod:4)IALPENIC(UniMod:4)GIGWHLVGNSC(UniMod:4)LK	3	NQEC(UniMod:4)IALPENIC(UniMod:4)GIGWHLVGNSC(UniMod:4)LK3	70897.6	59873.6	42716
A0A0U1RRP3	A0A0U1RRP3	A0A0U1RRP3_RAT	Upf3b	UPF3B, regulator of nonsense mediated mRNA decay	1	NQEDILLFR	NQEDILLFR	2	NQEDILLFR2		9596.01	4895.65
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	NQEELSSQVWICTSTHSTTK	NQEELSSQVWIC(UniMod:4)TSTHSTTK	3	NQEELSSQVWIC(UniMod:4)TSTHSTTK3	2520.08	2668.3	3315.71
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	NQEIEELTK	NQEIEELTK	2	NQEIEELTK2	67964	69540.2	72251.3
Q64620	Q64620	PPP6_RAT	Ppp6c	Serine/threonine-protein phosphatase 6 catalytic subunit	1	NQEIPHK	NQEIPHK	1	NQEIPHK1			6336.27
Q64620	Q64620	PPP6_RAT	Ppp6c	Serine/threonine-protein phosphatase 6 catalytic subunit	1	NQEIPHK	NQEIPHK	2	NQEIPHK2			70348
A0A8I5ZR58	A0A8I5ZR58	A0A8I5ZR58_RAT	Cux1-ps1	Protein CASP	1	NQELEAESR	NQELEAESR	2	NQELEAESR2	5186.03	10197.2	10954.1
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	NQELESVDEGLLQFCASK	NQELESVDEGLLQFC(UniMod:4)ASK	3	NQELESVDEGLLQFC(UniMod:4)ASK3	10671.2	10306.4	2671.6
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	NQELEVVR	NQELEVVR	2	NQELEVVR2	118723	105993	115912
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	NQELSQSVSSTTRPLLR	NQELSQSVSSTTRPLLR	3	NQELSQSVSSTTRPLLR3	15930.9	15296.7	18582.7
Q4V899	Q4V899	TM165_RAT	Tmem165	Transmembrane protein 165	1	NQEPPAPAQQLQPQPAAVQGLEPAR	NQEPPAPAQQLQPQPAAVQGLEPAR	3	NQEPPAPAQQLQPQPAAVQGLEPAR3	25745.1	30382.9	41745.1
Q5PQK5	Q5PQK5	Q5PQK5_RAT	Rdx	Radixin	1	NQEQLAAELAEFTAK	NQEQLAAELAEFTAK	2	NQEQLAAELAEFTAK2	13294	8832.96	3656.64
D3ZHC4	D3ZHC4	D3ZHC4_RAT	Hebp2	Heme binding protein 2	1	NQEQLLTLANILR	NQEQLLTLANILR	2	NQEQLLTLANILR2	3041.74	5744.1	6484.88
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	NQEQMKPLEEK	NQEQMKPLEEK	2	NQEQMKPLEEK2	10336	5726.07	11464.5
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	NQEQMKPLEEK	NQEQMKPLEEK	3	NQEQMKPLEEK3	146780	124475	176068
F1M8V2	F1M8V2	F1M8V2_RAT	Ube4b	Ubiquitin conjugation factor E4	1	NQEQWDQLPR	NQEQWDQLPR	2	NQEQWDQLPR2	9890.52	8041.48	9080.58
P20411	P20411	FCERG_RAT	Fcer1g	High affinity immunoglobulin epsilon receptor subunit gamma	1	NQETYETLK	NQETYETLK	2	NQETYETLK2	1.14347e+06	1.08785e+06	1.15922e+06
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	NQEVVLR	NQEVVLR	2	NQEVVLR2	15937.8	17575.3	13130.2
P29994	P29994;P29995	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	0	NQEYIAK	NQEYIAK	1	NQEYIAK1	2398.27		1116.6
P29994	P29994;P29995	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	0	NQEYIAK	NQEYIAK	2	NQEYIAK2	70884.1	63853.8	63548.4
D4ADK9	D4ADK9	D4ADK9_RAT	AABR07065781.1	Igh protein-like	1	NQFFLQLNSVTTEDTATYYCAR	NQFFLQLNSVTTEDTATYYC(UniMod:4)AR	3	NQFFLQLNSVTTEDTATYYC(UniMod:4)AR3	41402.3	28796.1	38808.6
A0A8J8XQI9	A0A8J8XQI9	A0A8J8XQI9_RAT	Bche	Carboxylic ester hydrolase	1	NQFNDYTSK	NQFNDYTSK	2	NQFNDYTSK2	4446.77		4687.99
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	NQFVHPPR	NQFVHPPR	2	NQFVHPPR2	39493.8	21763.2	19756.3
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	NQGAEQWR	NQGAEQWR	2	NQGAEQWR2	13199	18377.3	12737.7
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	NQGATIHLPPSNR	NQGATIHLPPSNR	3	NQGATIHLPPSNR3	62944.4	73202.5	66793.5
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	NQGDFSLSVR	NQGDFSLSVR	2	NQGDFSLSVR2	22835.7	28008.4	24646.3
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	NQGFDVVLVDTAGR	NQGFDVVLVDTAGR	2	NQGFDVVLVDTAGR2	14565.2	13743.3	15219.3
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	NQGIEEALK	NQGIEEALK	2	NQGIEEALK2	1.30694e+06	1.30864e+06	1.32687e+06
Q5FWS5	Q5FWS5	Q5FWS5_RAT	Loxl1	Lysyl oxidase homolog	1	NQGTADFLPNRPR	NQGTADFLPNRPR	3	NQGTADFLPNRPR3	247839	218923	201318
P16636	P16636	LYOX_RAT	Lox	Protein-lysine 6-oxidase	1	NQGTSDFLPSRPR	NQGTSDFLPSRPR	3	NQGTSDFLPSRPR3	70366	73293.5	76618.5
D3ZL10	D3ZL10	D3ZL10_RAT	Col6a6	Collagen type VI alpha 6 chain	1	NQGVPQIAVLVTHR	NQGVPQIAVLVTHR	3	NQGVPQIAVLVTHR3	3991.68	5059.57	4886.5
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	NQGYYDYVKPR	NQGYYDYVKPR	2	NQGYYDYVKPR2	14889.1	12431	17067.9
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	NQGYYDYVKPR	NQGYYDYVKPR	3	NQGYYDYVKPR3	63637.7	82519.3	82243.5
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	NQHEIIR	NQHEIIR	2	NQHEIIR2	49798.1	49178	42552.7
D4AD36	D4AD36	D4AD36_RAT	Fchsd1	FCH and double SH3 domains 1	1	NQHGEAGFVPER	NQHGEAGFVPER	3	NQHGEAGFVPER3	9120.99	15677.2	13866.9
Q05695	Q05695	L1CAM_RAT	L1cam	Neural cell adhesion molecule L1	1	NQHGLLLANAYIYVVQLPAR	NQHGLLLANAYIYVVQLPAR	3	NQHGLLLANAYIYVVQLPAR3	11588.9	4131.64	3806.69
Q9R1T3	Q9R1T3	CATZ_RAT	Ctsz	Cathepsin Z	1	NQHIPQYCGSCWAHGSTSALADR	NQHIPQYC(UniMod:4)GSC(UniMod:4)WAHGSTSALADR	3	NQHIPQYC(UniMod:4)GSC(UniMod:4)WAHGSTSALADR3	25146.8	30197.1	21283.1
Q9R1T3	Q9R1T3	CATZ_RAT	Ctsz	Cathepsin Z	1	NQHIPQYCGSCWAHGSTSALADR	NQHIPQYC(UniMod:4)GSC(UniMod:4)WAHGSTSALADR	4	NQHIPQYC(UniMod:4)GSC(UniMod:4)WAHGSTSALADR4	67005.4	76335.5	70676.4
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	NQHLEEEVK	NQHLEEEVK	2	NQHLEEEVK2	4109.6		1556.16
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	NQHLEEEVKDLADK	NQHLEEEVKDLADK	3	NQHLEEEVKDLADK3	5949.44	3891.24	6051.63
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	NQHLEEEVKDLADK	NQHLEEEVKDLADK	4	NQHLEEEVKDLADK4	1695.67	4328.04	4341.4
F1M471	F1M471	F1M471_RAT	Epm2aip1	EPM2A interacting protein 1	1	NQHTLSQPLTDEHLQALFR	NQHTLSQPLTDEHLQALFR	4	NQHTLSQPLTDEHLQALFR4	9865.75	22207	10325.4
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	NQIDMLVPR	NQIDMLVPR	2	NQIDMLVPR2	39536.7	34043.1	43957
F1LWX9	F1LWX9	F1LWX9_RAT	Tmem117	Transmembrane protein 117	1	NQIFYKPHEYGQYIGPGQK	NQIFYKPHEYGQYIGPGQK	4	NQIFYKPHEYGQYIGPGQK4	19582.8	32641.6	32336.1
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	NQIGDKEK	NQIGDKEK	1	NQIGDKEK1			1277.13
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	NQIGDKEK	NQIGDKEK	2	NQIGDKEK2			243812
A0A0G2K1A2	A0A0G2K1A2	A0A0G2K1A2_RAT	Mpo	Myeloperoxidase	1	NQINALTSFVDASGVYGSEDPLAR	NQINALTSFVDASGVYGSEDPLAR	3	NQINALTSFVDASGVYGSEDPLAR3	16705.8	12425.5	7801.62
O35353	O35353	GBB4_RAT	Gnb4	Guanine nucleotide-binding protein subunit beta-4	1	NQIQDAR	NQIQDAR	2	NQIQDAR2	62041.3		76030.5
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	NQISCIEEGAFR	NQISC(UniMod:4)IEEGAFR	2	NQISC(UniMod:4)IEEGAFR2	8715.03	8370.71	13098.2
D3ZL10	D3ZL10	D3ZL10_RAT	Col6a6	Collagen type VI alpha 6 chain	1	NQITHTVSVFSER	NQITHTVSVFSER	3	NQITHTVSVFSER3	3541.87		
A0A0U1RRS5	A0A0U1RRS5	A0A0U1RRS5_RAT	Smg7	Nonsense-mediated mRNA decay factor	1	NQITTLQGQAK	NQITTLQGQAK	2	NQITTLQGQAK2	12104.9	10610.6	9531.79
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	NQIVSLLWDPVTPGR	NQIVSLLWDPVTPGR	2	NQIVSLLWDPVTPGR2	3050.75	5747.65	9442.97
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	NQIYTQLSEVDQIKEDLTEHIK	NQIYTQLSEVDQIKEDLTEHIK	4	NQIYTQLSEVDQIKEDLTEHIK4	3116.35		
Q9JHU5	Q9JHU5	ARFP1_RAT	Arfip1	Arfaptin-1	1	NQLALFHSAVAAYFAGNQK	NQLALFHSAVAAYFAGNQK	3	NQLALFHSAVAAYFAGNQK3	8239.34	9039.98	6077.94
D3ZQ80	D3ZQ80	D3ZQ80_RAT	Smg8	Nonsense-mediated mRNA decay factor SMG8	1	NQLAQALR	NQLAQALR	2	NQLAQALR2	8385.76	7193.17	17380.3
Q8CGS4	Q8CGS4	CHMP3_RAT	Chmp3	Charged multivesicular body protein 3	1	NQLAVLR	NQLAVLR	2	NQLAVLR2	460964	405900	386052
F7FF81	F7FF81	F7FF81_RAT	Pfdn5	Prefoldin subunit 5	1	NQLDQEVEFLSTSIAQLK	NQLDQEVEFLSTSIAQLK	3	NQLDQEVEFLSTSIAQLK3	16156.9	10471.3	20253.7
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	NQLEESEFTCAAAVK	NQLEESEFTC(UniMod:4)AAAVK	2	NQLEESEFTC(UniMod:4)AAAVK2	6112.93	5486.96	7573.68
Q9EQP5	Q9EQP5	PRELP_RAT	Prelp	Prolargin	1	NQLEEVPSALPR	NQLEEVPSALPR	2	NQLEEVPSALPR2	11166.3	6541.73	10253.6
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	NQLETAPPHELK	NQLETAPPHELK	2	NQLETAPPHELK2	2181.88	1811.12	4615.96
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	NQLETAPPHELK	NQLETAPPHELK	3	NQLETAPPHELK3	23293.7	31063.9	18442.9
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	NQLFTMMK	NQLFTMMK	2	NQLFTMMK2	19843.6	17674.9	20744.9
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	NQLGTFSTSYLVHFTHLTHLYLSR	NQLGTFSTSYLVHFTHLTHLYLSR	3	NQLGTFSTSYLVHFTHLTHLYLSR3	121676	186355	166732
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	NQLGTFSTSYLVHFTHLTHLYLSR	NQLGTFSTSYLVHFTHLTHLYLSR	4	NQLGTFSTSYLVHFTHLTHLYLSR4	323586	343946	338528
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	NQLITDIIDIVKDPVTPSEYK	NQLITDIIDIVKDPVTPSEYK	3	NQLITDIIDIVKDPVTPSEYK3	41939	41724.1	19170.6
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	NQLLASLSECLTR	NQLLASLSEC(UniMod:4)LTR	2	NQLLASLSEC(UniMod:4)LTR2	75407.6	84377.3	123312
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	NQLLASLSECLTR	NQLLASLSEC(UniMod:4)LTR	3	NQLLASLSEC(UniMod:4)LTR3	6751.74	4378.7	8838.5
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	NQLLEGK	NQLLEGK	1	NQLLEGK1	9544.03	7664.63	9180.49
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	NQLLEGK	NQLLEGK	2	NQLLEGK2	275949	309168	289116
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	NQLLGPDENSK	NQLLGPDENSK	2	NQLLGPDENSK2	78850.6	64350.1	80505.3
Q5RK08	Q5RK08	Q5RK08_RAT	Nipsnap2	Glioblastoma amplified sequence	1	NQLLLEFSFWNEPVPR	NQLLLEFSFWNEPVPR	3	NQLLLEFSFWNEPVPR3	8426.38	2587.94	
Q9ES71	Q9ES71	GNPAT_RAT	Gnpat	Dihydroxyacetone phosphate acyltransferase	1	NQLLNVFAR	NQLLNVFAR	2	NQLLNVFAR2	3974.65		2937.14
P58405	P58405	STRN3_RAT	Strn3	Striatin-3	1	NQLLSCSADGTIR	NQLLSC(UniMod:4)SADGTIR	2	NQLLSC(UniMod:4)SADGTIR2	62795.4	56436.2	67928.7
Q5FVQ9	Q5FVQ9	TBCE_RAT	Tbce	Tubulin-specific chaperone E	1	NQLLTLK	NQLLTLK	2	NQLLTLK2	14642.6	10427.5	10782.6
Q4V8C7	Q4V8C7	PRKRA_RAT	Prkra	Interferon-inducible double-stranded RNA-dependent protein kinase activator A	1	NQLNPIGSLQELAIHHGWR	NQLNPIGSLQELAIHHGWR	4	NQLNPIGSLQELAIHHGWR4	27771.1	34355.4	30826.8
A0A0G2KB61	A0A0G2KB61	A0A0G2KB61_RAT	Ppp1r13b	Protein phosphatase 1, regulatory subunit 13B	1	NQLNQEQNSK	NQLNQEQNSK	2	NQLNQEQNSK2			2909.55
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	NQLPAQSNSIYTHVAELWR	NQLPAQSNSIYTHVAELWR	3	NQLPAQSNSIYTHVAELWR3	155708	142450	138257
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	NQLPLVVDAICTR	NQLPLVVDAIC(UniMod:4)TR	2	NQLPLVVDAIC(UniMod:4)TR2	81686.6	84063.2	84266.3
B4F767	B4F767	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	1	NQLQGAMQHFSQR	NQLQGAMQHFSQR	3	NQLQGAMQHFSQR3	26428.7	26483.4	29895.4
A0A8I6AAA9	A0A8I6AAA9	A0A8I6AAA9_RAT	Lrch1	Leucine rich repeats and calponin homology domain containing 1	1	NQLSALPACLCGLPLK	NQLSALPAC(UniMod:4)LC(UniMod:4)GLPLK	2	NQLSALPAC(UniMod:4)LC(UniMod:4)GLPLK2	30668.8	27799.7	33846.3
A0A8I6AAA9	A0A8I6AAA9	A0A8I6AAA9_RAT	Lrch1	Leucine rich repeats and calponin homology domain containing 1	1	NQLSALPACLCGLPLK	NQLSALPAC(UniMod:4)LC(UniMod:4)GLPLK	3	NQLSALPAC(UniMod:4)LC(UniMod:4)GLPLK3	6797.25	4823.72	2740.51
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	NQLSSLPPYICQLPLR	NQLSSLPPYIC(UniMod:4)QLPLR	2	NQLSSLPPYIC(UniMod:4)QLPLR2	36361.6	37470.6	42972.3
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	NQLSSLPPYICQLPLR	NQLSSLPPYIC(UniMod:4)QLPLR	3	NQLSSLPPYIC(UniMod:4)QLPLR3	37102.7	24559.9	23194.5
O70210	O70210	CHAD_RAT	Chad	Chondroadherin	1	NQLSSYPSAALSK	NQLSSYPSAALSK	2	NQLSSYPSAALSK2	7521.34	6421.42	4270.02
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	NQLSTLPDELGDLPLVR	NQLSTLPDELGDLPLVR	2	NQLSTLPDELGDLPLVR2	13427.2	9181.31	10675.2
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	NQLSTLPDELGDLPLVR	NQLSTLPDELGDLPLVR	3	NQLSTLPDELGDLPLVR3	27023.7	29423.3	30245.6
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	NQLSTLPVHLCNLPLK	NQLSTLPVHLC(UniMod:4)NLPLK	2	NQLSTLPVHLC(UniMod:4)NLPLK2	1742.54	838.42	2435.84
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	NQLSTLPVHLCNLPLK	NQLSTLPVHLC(UniMod:4)NLPLK	3	NQLSTLPVHLC(UniMod:4)NLPLK3	30572.3	24292.4	31726.1
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	NQLTAMSSVLAK	NQLTAMSSVLAK	2	NQLTAMSSVLAK2	172248	166177	165251
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	NQLTSLPSAICK	NQLTSLPSAIC(UniMod:4)K	2	NQLTSLPSAIC(UniMod:4)K2	216694	248438	185795
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	NQLTSLPSAICK	NQLTSLPSAIC(UniMod:4)K	3	NQLTSLPSAIC(UniMod:4)K3	16312.6	13662.1	8985.19
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	NQLTSNPENTVFDAK	NQLTSNPENTVFDAK	2	NQLTSNPENTVFDAK2	1.81292e+06	1.77699e+06	1.96403e+06
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	NQLTSNPENTVFDAK	NQLTSNPENTVFDAK	3	NQLTSNPENTVFDAK3	105187	126178	168290
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	NQLTSNPENTVFDAKR	NQLTSNPENTVFDAKR	2	NQLTSNPENTVFDAKR2	2567.75		3202.5
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	NQLTSNPENTVFDAKR	NQLTSNPENTVFDAKR	3	NQLTSNPENTVFDAKR3	34683.3	65936.6	67209.1
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	NQLVEIEK	NQLVEIEK	1	NQLVEIEK1	12519.8	14238.9	8364.3
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	NQLVEIEK	NQLVEIEK	2	NQLVEIEK2	1.10507e+06	996439	956434
A0A8I6GL10	A0A8I6GL10	A0A8I6GL10_RAT	Uchl5	Ubiquitin carboxyl-terminal hydrolase	1	NQMLIEEEVQK	NQMLIEEEVQK	2	NQMLIEEEVQK2	6421.29	8407.68	13647.2
A0A8I6ALM9	A0A8I6ALM9	A0A8I6ALM9_RAT	Ptk7	Protein tyrosine kinase 7	1	NQMLISEDSR	NQMLISEDSR	2	NQMLISEDSR2	4379.8	3215.06	3200.44
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	NQNAPDNRPEENFFSR	NQNAPDNRPEENFFSR	3	NQNAPDNRPEENFFSR3	54905.7	66258.7	49546.8
P18395	P18395	CSDE1_RAT	Csde1	Cold shock domain-containing protein E1	1	NQNDPLPGR	NQNDPLPGR	2	NQNDPLPGR2	17428.1	19482.2	15932.9
D3ZKE1	D3ZKE1	D3ZKE1_RAT	Uvrag	UV radiation resistance associated	1	NQNEIIFGLNDGYYGAPFEHK	NQNEIIFGLNDGYYGAPFEHK	3	NQNEIIFGLNDGYYGAPFEHK3	2330.6	7430.82	4154.21
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	NQNLLQHTQDLLR	NQNLLQHTQDLLR	2	NQNLLQHTQDLLR2	16044.6	15313.9	12843
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	NQNLLQHTQDLLR	NQNLLQHTQDLLR	3	NQNLLQHTQDLLR3	69115.2	59210.1	71465.5
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	NQNLVGFK	NQNLVGFK	1	NQNLVGFK1	2849.31		
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	NQNLVGFK	NQNLVGFK	2	NQNLVGFK2	127258	98487.7	132248
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	NQNPDLTGLCEPTPQDHIK	NQNPDLTGLC(UniMod:4)EPTPQDHIK	3	NQNPDLTGLC(UniMod:4)EPTPQDHIK3	26188.8	24577.2	27934.8
D3ZCQ2	D3ZCQ2	D3ZCQ2_RAT	Alg11	GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase	1	NQNPGFNNAAFISR	NQNPGFNNAAFISR	2	NQNPGFNNAAFISR2	5825.83	9517.84	3613.04
P70615	P70615	LMNB1_RAT	Lmnb1	Lamin-B1	1	NQNSWGTGEDVK	NQNSWGTGEDVK	2	NQNSWGTGEDVK2	14764	12375.6	17586.8
D3ZED8	D3ZED8	D3ZED8_RAT	Pmel	Premelanosome protein	1	NQNWHGVSR	NQNWHGVSR	2	NQNWHGVSR2	60623.8	60879.3	42987.5
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	NQNYLDILR	NQNYLDILR	2	NQNYLDILR2	6207.18		
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	NQNYMNILR	NQNYMNILR	2	NQNYMNILR2	25651	34151.6	36610.1
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	NQPEPTVEEIENAFQGNLCR	NQPEPTVEEIENAFQGNLC(UniMod:4)R	3	NQPEPTVEEIENAFQGNLC(UniMod:4)R3	11944.5	7242.87	5991.09
D4A8F2	D4A8F2	D4A8F2_RAT	Rsu1	Ras suppressor protein 1	1	NQPEVDMSDR	NQPEVDMSDR	2	NQPEVDMSDR2	651922	514042	562322
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	NQPFIVSNQNK	NQPFIVSNQNK	2	NQPFIVSNQNK2	75667.8	72234.1	61186.3
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	NQPFIVSNQNKR	NQPFIVSNQNKR	2	NQPFIVSNQNKR2	7611.56	6512.81	5408.96
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	NQPFIVSNQNKR	NQPFIVSNQNKR	3	NQPFIVSNQNKR3	27004.9	34883.9	51184.8
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	NQPGSTLMEILETPATEQQELEHTK	NQPGSTLMEILETPATEQQELEHTK	3	NQPGSTLMEILETPATEQQELEHTK3	32883	52605.5	19455.6
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	NQPGSTLMEILETPATEQQELEHTK	NQPGSTLMEILETPATEQQELEHTK	4	NQPGSTLMEILETPATEQQELEHTK4	28733.8	9528.87	19609.9
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	NQPMALSLYR	NQPMALSLYR	2	NQPMALSLYR2	28232.7	18437.2	25153.3
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	NQPMTPEAVR	NQPMTPEAVR	2	NQPMTPEAVR2	151767	125270	152626
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	NQPQRPESFLFR	NQPQRPESFLFR	3	NQPQRPESFLFR3	53828.3	73167.4	82236.7
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	NQPSMYEQLR	NQPSMYEQLR	2	NQPSMYEQLR2	35655.9	30668.4	32695.8
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	NQQAAALEATK	NQQAAALEATK	2	NQQAAALEATK2	8883.68	12098.6	8951.15
Q5XIC1	Q5XIC1	GMPPA_RAT	Gmppa	Mannose-1-phosphate guanyltransferase alpha	1	NQQDGQLEESPGSWPGAGTIR	NQQDGQLEESPGSWPGAGTIR	3	NQQDGQLEESPGSWPGAGTIR3	7666.21	8444.28	
D4ACN8	D4ACN8	PLRKT_RAT	Plgrkt	Plasminogen receptor (KT)	1	NQQEFMVMHAR	NQQEFMVMHAR	2	NQQEFMVMHAR2	7755.71	5690.78	2136.62
D4ACN8	D4ACN8	PLRKT_RAT	Plgrkt	Plasminogen receptor (KT)	1	NQQEFMVMHAR	NQQEFMVMHAR	3	NQQEFMVMHAR3	15083.7	21977.3	21579.6
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	NQQFGPYCGNGFPGPLTIK	NQQFGPYC(UniMod:4)GNGFPGPLTIK	3	NQQFGPYC(UniMod:4)GNGFPGPLTIK3	3.29881e+06	3.9065e+06	4.01436e+06
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	NQQFPDKETSEK	NQQFPDKETSEK	3	NQQFPDKETSEK3	11668.7	27406.4	
P62994	P62994	GRB2_RAT	Grb2	Growth factor receptor-bound protein 2	1	NQQIFLR	NQQIFLR	2	NQQIFLR2	108515	97871.8	117255
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	NQQITHANNTVSSFK	NQQITHANNTVSSFK	2	NQQITHANNTVSSFK2	4693.71	5381.98	6474.83
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	NQQITHANNTVSSFK	NQQITHANNTVSSFK	3	NQQITHANNTVSSFK3	50287	53324.8	53028.9
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	NQQLDLPYEYLK	NQQLDLPYEYLK	2	NQQLDLPYEYLK2	16316.2	11870.7	11320.6
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	NQQLDLPYEYLKPSR	NQQLDLPYEYLKPSR	2	NQQLDLPYEYLKPSR2	55815.8	29948.8	40295.3
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	NQQLDLPYEYLKPSR	NQQLDLPYEYLKPSR	3	NQQLDLPYEYLKPSR3	872918	959116	914768
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	NQQQDDIEELETK	NQQQDDIEELETK	2	NQQQDDIEELETK2	3159.66	2732.75	5200.05
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	NQQQETETFYITK	NQQQETETFYITK	2	NQQQETETFYITK2	12765.7	10264	12839.7
Q6P7P5	Q6P7P5	5MP2_RAT	Bzw1	eIF5-mimic protein 2	1	NQQTIGAR	NQQTIGAR	2	NQQTIGAR2	137356	182926	148000
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	NQQVMCEAGLHAR	NQQVMC(UniMod:4)EAGLHAR	3	NQQVMC(UniMod:4)EAGLHAR3	5381.46	6995.52	4039.07
A0A8I6G9F8	A0A8I6G9F8	A0A8I6G9F8_RAT	Wdr59	WD repeat domain 59	1	NQSCLEPCLR	NQSC(UniMod:4)LEPC(UniMod:4)LR	2	NQSC(UniMod:4)LEPC(UniMod:4)LR2	1358.74	2430.97	2849.95
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	NQSENSMDSQGK	NQSENSMDSQGK	2	NQSENSMDSQGK2			29890.2
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	NQSENSMDSQGKENQEDLGK	NQSENSMDSQGKENQEDLGK	3	NQSENSMDSQGKENQEDLGK3	9730.32	5194.93	11208.9
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	NQSETLNWLSNAIK	NQSETLNWLSNAIK	2	NQSETLNWLSNAIK2	25605.4	32561.1	28851.9
P18445	D3ZF07;D4AAY6;D3ZG03;P18445	RL27A_RAT	Rpl27a	Large ribosomal subunit protein uL15	0	NQSFCPTVNLDK	NQSFC(UniMod:4)PTVNLDK	2	NQSFC(UniMod:4)PTVNLDK2	12022.6	8944.13	11967
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	NQSIAIELSDLVVYCKPTSK	NQSIAIELSDLVVYC(UniMod:4)KPTSK	3	NQSIAIELSDLVVYC(UniMod:4)KPTSK3	17095	15408.5	12346.2
P70569	P70569;Q9QYF3;F1M111	MYO5B_RAT	Myo5b	Unconventional myosin-Vb	0	NQSIIVSGESGAGK	NQSIIVSGESGAGK	2	NQSIIVSGESGAGK2	4951.37	4337.38	5642.51
A4V8B4	A4V8B4	SAV1_RAT	Sav1	Protein salvador homolog 1	1	NQSLLVPANPYHTAEIPDWLQVYAR	NQSLLVPANPYHTAEIPDWLQVYAR	3	NQSLLVPANPYHTAEIPDWLQVYAR3	47012.3	61884.1	44222.9
D3Z8E0	D3Z8E0	D3Z8E0_RAT	Rps6ka3	Ribosomal protein S6 kinase	1	NQSPVLEPVGR	NQSPVLEPVGR	2	NQSPVLEPVGR2	12430.9	10670	11173.4
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	NQSSQISTEK	NQSSQISTEK	2	NQSSQISTEK2			64653.2
D3ZLC1	D3ZLC1	D3ZLC1_RAT	Lmnb2	Lamin B2	1	NQSSWGSGENFR	NQSSWGSGENFR	2	NQSSWGSGENFR2	1417.5	1202.01	3466.47
Q8VIL3	Q8VIL3	ZWINT_RAT	Zwint	ZW10 interactor	1	NQSYLQLLCSLQNK	NQSYLQLLC(UniMod:4)SLQNK	2	NQSYLQLLC(UniMod:4)SLQNK2	28652.6	18963.8	20639.2
P63018	P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	NQTAEKEEFEHQQK	NQTAEKEEFEHQQK	2	NQTAEKEEFEHQQK2	64225.2		32686.2
P63018	P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	NQTAEKEEFEHQQK	NQTAEKEEFEHQQK	3	NQTAEKEEFEHQQK3	110457		103825
P63018	P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	NQTAEKEEFEHQQK	NQTAEKEEFEHQQK	4	NQTAEKEEFEHQQK4	33571.6		60611
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	NQTEDSLR	NQTEDSLR	2	NQTEDSLR2	4413.08		
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	NQTEDSLRK	NQTEDSLRK	2	NQTEDSLRK2			30942.3
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	NQTLQNEILGHAPR	NQTLQNEILGHAPR	3	NQTLQNEILGHAPR3	49588.1	69892.2	44319.1
P29975	P29975	AQP1_RAT	Aqp1	Aquaporin-1	1	NQTLVQDNVK	NQTLVQDNVK	2	NQTLVQDNVK2	307858	232621	289066
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	NQTPAPTAAQTSAPSK	NQTPAPTAAQTSAPSK	2	NQTPAPTAAQTSAPSK2	23372.1	27817	29433.4
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	NQTQLSTK	NQTQLSTK	1	NQTQLSTK1			1335.44
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	NQTQLSTK	NQTQLSTK	2	NQTQLSTK2	10969.9		
Q5BK32	Q5BK32	FAF2_RAT	Faf2	FAS-associated factor 2	1	NQTQVLR	NQTQVLR	2	NQTQVLR2	38508	42614.1	45000.2
A0A0U1RRS5	A0A0U1RRS5	A0A0U1RRS5_RAT	Smg7	Nonsense-mediated mRNA decay factor	1	NQTSQAESYYR	NQTSQAESYYR	2	NQTSQAESYYR2	1596.54		
A0A0G2K543	A0A0G2K543	A0A0G2K543_RAT	C2cd5	C2 calcium-dependent domain containing 5	1	NQTYSFSPSK	NQTYSFSPSK	2	NQTYSFSPSK2	3793.1	3739.77	8604.16
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	NQVAAEVAK	NQVAAEVAK	2	NQVAAEVAK2	61597	45538.9	48753.4
P0DMW0;P0DMW1	P0DMW0;P0DMW1	HS71A_RAT;HS71B_RAT	Hspa1a;Hspa1b	Heat shock 70 kDa protein 1A	0	NQVALNPQNTVFDAK	NQVALNPQNTVFDAK	2	NQVALNPQNTVFDAK2	11135.3	3146.72	
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	NQVAMNPTNTIFDAK	NQVAMNPTNTIFDAK	2	NQVAMNPTNTIFDAK2	51227.9	40481.6	39501.2
P63018	P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	NQVAMNPTNTVFDAK	NQVAMNPTNTVFDAK	2	NQVAMNPTNTVFDAK2	2.23437e+06	2.14038e+06	2.38377e+06
P63018	P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	NQVAMNPTNTVFDAK	NQVAMNPTNTVFDAK	3	NQVAMNPTNTVFDAK3	40852.5	27344	43646.3
P63018	P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	NQVAMNPTNTVFDAKR	NQVAMNPTNTVFDAKR	2	NQVAMNPTNTVFDAKR2		2463.4	
P63018	P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	NQVAMNPTNTVFDAKR	NQVAMNPTNTVFDAKR	3	NQVAMNPTNTVFDAKR3	7852.77	5664.09	19531.3
Q8CGU6	Q8CGU6	NICA_RAT	Ncstn	Nicastrin	1	NQVEDLLVTLEQSGADTPQVVLSR	NQVEDLLVTLEQSGADTPQVVLSR	3	NQVEDLLVTLEQSGADTPQVVLSR3	8892.85	14584.7	9013.49
Q8CGU6	Q8CGU6	NICA_RAT	Ncstn	Nicastrin	1	NQVEDLLVTLEQSGADTPQVVLSR	NQVEDLLVTLEQSGADTPQVVLSR	4	NQVEDLLVTLEQSGADTPQVVLSR4		2886.58	1300.22
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	NQVEESAK	NQVEESAK	2	NQVEESAK2			94030.1
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	NQVGDENWR	NQVGDENWR	2	NQVGDENWR2	149338	176884	169184
O70351	O70351	HCD2_RAT	Hsd17b10	3-hydroxyacyl-CoA dehydrogenase type-2	1	NQVHTLEDFQR	NQVHTLEDFQR	2	NQVHTLEDFQR2	5772.81	5137.21	6245.75
O70351	O70351	HCD2_RAT	Hsd17b10	3-hydroxyacyl-CoA dehydrogenase type-2	1	NQVHTLEDFQR	NQVHTLEDFQR	3	NQVHTLEDFQR3	56855.4	56725.1	58180
Q6P6R2	Q6P6R2	DLDH_RAT	Dld	Dihydrolipoyl dehydrogenase, mitochondrial	1	NQVTATTADGSTQVIGTK	NQVTATTADGSTQVIGTK	2	NQVTATTADGSTQVIGTK2	32480.8	30259	41905.6
Q6P6R2	Q6P6R2	DLDH_RAT	Dld	Dihydrolipoyl dehydrogenase, mitochondrial	1	NQVTATTADGSTQVIGTK	NQVTATTADGSTQVIGTK	3	NQVTATTADGSTQVIGTK3	15433.1	13375.7	20962.2
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	NQVVFAR	NQVVFAR	2	NQVVFAR2	420629	441079	498792
A0A8I6AE91	A0A8I6AE91	A0A8I6AE91_RAT	Gga2	Golgi associated, gamma adaptin ear containing, ARF binding protein 2	1	NQVVIPSCCK	NQVVIPSC(UniMod:4)C(UniMod:4)K	2	NQVVIPSC(UniMod:4)C(UniMod:4)K2	36205.9	35978.6	23343.6
D3ZL10	D3ZL10	D3ZL10_RAT	Col6a6	Collagen type VI alpha 6 chain	1	NQVVQEICAEEACR	NQVVQEIC(UniMod:4)AEEAC(UniMod:4)R	2	NQVVQEIC(UniMod:4)AEEAC(UniMod:4)R2	1878.95	1683.95	3774.88
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	NQVVVAAGR	NQVVVAAGR	1	NQVVVAAGR1	3804.7	3179.83	7970.19
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	NQVVVAAGR	NQVVVAAGR	2	NQVVVAAGR2	5.94169e+06	6.59872e+06	6.85221e+06
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	NQVYSLLLR	NQVYSLLLR	2	NQVYSLLLR2	150499	171727	176150
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	NQWIDNVEK	NQWIDNVEK	2	NQWIDNVEK2	558369	497822	465468
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	NQWQLSLDDLK	NQWQLSLDDLK	2	NQWQLSLDDLK2	10676.9	6420.04	9459.53
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	NQWQLSLDDLKK	NQWQLSLDDLKK	2	NQWQLSLDDLKK2	2998.19	3392.96	2905.06
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	NQWQLSLDDLKK	NQWQLSLDDLKK	3	NQWQLSLDDLKK3	47164.3	40933.7	31450.9
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	NQWVNLNEPEEEK	NQWVNLNEPEEEK	2	NQWVNLNEPEEEK2	13258.3	15427.9	12997.5
O08775	O08775	VGFR2_RAT	Kdr	Vascular endothelial growth factor receptor 2	1	NQYALIEGK	NQYALIEGK	2	NQYALIEGK2	35699.4	30186.4	41006.8
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	NQYDNDVTVWSPQGR	NQYDNDVTVWSPQGR	2	NQYDNDVTVWSPQGR2	1.9097e+06	1.828e+06	1.93508e+06
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	NQYDNDVTVWSPQGR	NQYDNDVTVWSPQGR	3	NQYDNDVTVWSPQGR3	973078	904588	1.08098e+06
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	NQYIDLMNQCR	NQYIDLMNQC(UniMod:4)R	2	NQYIDLMNQC(UniMod:4)R2	26069.7	22083.1	29972.9
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	NQYPGLYAQLQEFACR	NQYPGLYAQLQEFAC(UniMod:4)R	2	NQYPGLYAQLQEFAC(UniMod:4)R2	6990.7	9338.82	5648.16
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	NQYPGLYAQLQEFACR	NQYPGLYAQLQEFAC(UniMod:4)R	3	NQYPGLYAQLQEFAC(UniMod:4)R3	8601.4	2817.1	8345.5
Q6P7D4	Q6P7D4	CP20A_RAT	Cyp20a1	Cytochrome P450 20A1	1	NQYQEALMQLEAILKK	NQYQEALMQLEAILKK	3	NQYQEALMQLEAILKK3	4621.1	9142.67	5727.01
A0A0G2K1A4	A0A0G2K1A4	A0A0G2K1A4_RAT	Evi5l	Ecotropic viral integration site 5-like	1	NQYSELLK	NQYSELLK	2	NQYSELLK2	14484.4	12547.8	15372.2
P63322	P63322	RALA_RAT	Rala	Ras-related protein Ral-A	1	NRADQWNVNYVETSAK	NRADQWNVNYVETSAK	3	NRADQWNVNYVETSAK3	11142.5	12018.4	11306.2
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	NRADYLNPLFR	NRADYLNPLFR	3	NRADYLNPLFR3	3927.46	8133.83	9774.07
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	NRCNDQDTRTSYR	NRC(UniMod:4)NDQDTRTSYR	3	NRC(UniMod:4)NDQDTRTSYR3			1693.41
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	NRCNDQDTRTSYR	NRC(UniMod:4)NDQDTRTSYR	4	NRC(UniMod:4)NDQDTRTSYR4			1485.33
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	NRDAPEGGFDAIMQATVCDEK	NRDAPEGGFDAIMQATVC(UniMod:4)DEK	3	NRDAPEGGFDAIMQATVC(UniMod:4)DEK3	1.00648e+06	1.1915e+06	1.35861e+06
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	NRDDMLLNSDIFWKPQEAVQGDVGSFMIK	NRDDMLLNSDIFWKPQEAVQGDVGSFMIK	4	NRDDMLLNSDIFWKPQEAVQGDVGSFMIK4	30360.2	26224.5	30259.3
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	NRDELNGFFNTLIR	NRDELNGFFNTLIR	3	NRDELNGFFNTLIR3	60121.2	61760.3	63877.9
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	NRDGQSQVVPVDGSHR	NRDGQSQVVPVDGSHR	4	NRDGQSQVVPVDGSHR4	1378.92	9085.73	5801.71
F7FPK8	F7FPK8	F7FPK8_RAT	Lman2	Lectin, mannose-binding 2	1	NRDHDTFLAVR	NRDHDTFLAVR	3	NRDHDTFLAVR3	176472	163288	150486
P70569	P70569	MYO5B_RAT	Myo5b	Unconventional myosin-Vb	1	NRDTVYEEQINILK	NRDTVYEEQINILK	3	NRDTVYEEQINILK3	2436.04	1611.51	2380.32
D3ZKT0	D3ZKT0	TAM41_RAT	Tamm41	Phosphatidate cytidylyltransferase, mitochondrial	1	NRDVEETLLQVAQDPDCGDVVR	NRDVEETLLQVAQDPDC(UniMod:4)GDVVR	3	NRDVEETLLQVAQDPDC(UniMod:4)GDVVR3	6981.81	10899.8	9628.3
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	NREAASELLMR	NREAASELLMR	3	NREAASELLMR3	22796.6	27388.7	38143.4
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	NREASLGEASK	NREASLGEASK	2	NREASLGEASK2	33230.4		39312.8
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	NREEAIK	NREEAIK	1	NREEAIK1			42655.2
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	NREEAIK	NREEAIK	2	NREEAIK2			529244
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	NREHFATIR	NREHFATIR	3	NREHFATIR3	14103.9	23108.2	19210
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	NREILEESLR	NREILEESLR	3	NREILEESLR3	11728.4	16737.8	19501.3
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	NRELEEELR	NRELEEELR	3	NRELEEELR3	7851.41	8727.01	6177.4
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	NRELEEELRK	NRELEEELRK	3	NRELEEELRK3	22023.8	23867.8	24548.1
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	NRELLEEMQSLK	NRELLEEMQSLK	3	NRELLEEMQSLK3	5324.71	13523.4	18056.7
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	NRELLEEMQSLKK	NRELLEEMQSLKK	3	NRELLEEMQSLKK3	7563.17	19948	17439.2
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	NRELLEEMQSLKK	NRELLEEMQSLKK	4	NRELLEEMQSLKK4	9677.25	18893.3	10712.3
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	NREPLMPSPQFIK	NREPLMPSPQFIK	3	NREPLMPSPQFIK3	130599	209432	111259
B2RZB7	B2RZB7	B2RZB7_RAT	Snrpd1	Small nuclear ribonucleoprotein Sm D1	1	NREPVQLETLSIR	NREPVQLETLSIR	3	NREPVQLETLSIR3	14974	9045.79	7796.52
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	NREQEEIVR	NREQEEIVR	3	NREQEEIVR3	5904.7	5499.85	9028.77
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	NRETWYLSWALDTNQEER	NRETWYLSWALDTNQEER	3	NRETWYLSWALDTNQEER3	15680.6	23642	23747.4
Q02445	Q02445	TFPI1_RAT	Tfpi	Tissue factor pathway inhibitor	1	NRFDTLEECR	NRFDTLEEC(UniMod:4)R	2	NRFDTLEEC(UniMod:4)R2	1996.37	1384.49	4769.37
Q02445	Q02445	TFPI1_RAT	Tfpi	Tissue factor pathway inhibitor	1	NRFDTLEECR	NRFDTLEEC(UniMod:4)R	3	NRFDTLEEC(UniMod:4)R3	162143	157952	169177
Q02445	Q02445	TFPI1_RAT	Tfpi	Tissue factor pathway inhibitor	1	NRFDTLEECRK	NRFDTLEEC(UniMod:4)RK	2	NRFDTLEEC(UniMod:4)RK2	3556.71	2060.97	
Q02445	Q02445	TFPI1_RAT	Tfpi	Tissue factor pathway inhibitor	1	NRFDTLEECRK	NRFDTLEEC(UniMod:4)RK	3	NRFDTLEEC(UniMod:4)RK3	209966	236317	211200
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	NRFPEVPEAACQLVSLEGLSLYHNCLR	NRFPEVPEAAC(UniMod:4)QLVSLEGLSLYHNC(UniMod:4)LR	4	NRFPEVPEAAC(UniMod:4)QLVSLEGLSLYHNC(UniMod:4)LR4	14436.8	20334.8	17913.5
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	NRFPEVSGYCYCADSQGR	NRFPEVSGYC(UniMod:4)YC(UniMod:4)ADSQGR	3	NRFPEVSGYC(UniMod:4)YC(UniMod:4)ADSQGR3	7810.85	9958.38	7072.08
A0A096MJ11	A0A096MJ11	A0A096MJ11_RAT	Gsdmd	Gasdermin D	1	NRGDDVFVVTEVLQTK	NRGDDVFVVTEVLQTK	3	NRGDDVFVVTEVLQTK3	32793.9	35241.9	24060.4
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	NRGPGSAILEMK	NRGPGSAILEMK	3	NRGPGSAILEMK3	15284.4	10679.9	5785.51
Q9Z2X3	Q9Z2X3	PSD10_RAT	Psmd10	26S proteasome non-ATPase regulatory subunit 10	1	NRHEIAVMLLEGGANPDAK	NRHEIAVMLLEGGANPDAK	3	NRHEIAVMLLEGGANPDAK3	10711.2	7883.73	4262.73
Q9Z2X3	Q9Z2X3	PSD10_RAT	Psmd10	26S proteasome non-ATPase regulatory subunit 10	1	NRHEIAVMLLEGGANPDAK	NRHEIAVMLLEGGANPDAK	4	NRHEIAVMLLEGGANPDAK4	17765.4	21262.1	22310.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	NRIEIDIPLPLGGK	NRIEIDIPLPLGGK	2	NRIEIDIPLPLGGK2	136896	215650	182030
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	NRIEIDIPLPLGGK	NRIEIDIPLPLGGK	3	NRIEIDIPLPLGGK3	1.12398e+06	1.64057e+06	1.46317e+06
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	NRIPVVLLACGSFNPITNMHLR	NRIPVVLLAC(UniMod:4)GSFNPITNMHLR	3	NRIPVVLLAC(UniMod:4)GSFNPITNMHLR3	12646.6	16906.1	7962.28
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	NRIPVVLLACGSFNPITNMHLR	NRIPVVLLAC(UniMod:4)GSFNPITNMHLR	4	NRIPVVLLAC(UniMod:4)GSFNPITNMHLR4	8795.77	13393.5	17684.1
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	NRLDCTQCLQHPWLMK	NRLDC(UniMod:4)TQC(UniMod:4)LQHPWLMK	3	NRLDC(UniMod:4)TQC(UniMod:4)LQHPWLMK3	18998	12891.4	7619.98
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	NRLDCTQCLQHPWLMK	NRLDC(UniMod:4)TQC(UniMod:4)LQHPWLMK	4	NRLDC(UniMod:4)TQC(UniMod:4)LQHPWLMK4	59553.1	83019	89259.2
D3ZUU6	D3ZUU6	D3ZUU6_RAT	Clec3b	C-type lectin domain family 3, member B	1	NRLDVLAQEVALLK	NRLDVLAQEVALLK	3	NRLDVLAQEVALLK3	27659.8	31531	23813.4
P19511	P19511	AT5F1_RAT	Atp5pb	ATP synthase F(0) complex subunit B1, mitochondrial	1	NRLDYHISVQDMMR	NRLDYHISVQDMMR	3	NRLDYHISVQDMMR3	69306.3	60346.8	99272.2
P19511	P19511	AT5F1_RAT	Atp5pb	ATP synthase F(0) complex subunit B1, mitochondrial	1	NRLDYHISVQDMMR	NRLDYHISVQDMMR	4	NRLDYHISVQDMMR4	72769.8	57647.9	64917.3
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	NRLPPEFSPLIIK	NRLPPEFSPLIIK	3	NRLPPEFSPLIIK3	32864.2	48060.6	33998.3
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	NRNDPAEAAK	NRNDPAEAAK	2	NRNDPAEAAK2			9280.35
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	NRNDYLDIYAIGVGK	NRNDYLDIYAIGVGK	3	NRNDYLDIYAIGVGK3	55240.5	59537	48274.8
F7EXP7	F7EXP7	F7EXP7_RAT	Snx7	Sorting nexin 7	1	NRPDEFTEMNNFIETFSQK	NRPDEFTEMNNFIETFSQK	3	NRPDEFTEMNNFIETFSQK3	13629.4	3765.38	4704.71
Q3L7M0	Q3L7M0	GGTA1_RAT	Ggta1	N-acetyllactosaminide alpha-1,3-galactosyltransferase	1	NRPEVLTVTPWK	NRPEVLTVTPWK	3	NRPEVLTVTPWK3	8206.71	15418.5	19942.9
Q68FY0	Q68FY0	QCR1_RAT	Uqcrc1	Cytochrome b-c1 complex subunit 1, mitochondrial	1	NRPGNALEK	NRPGNALEK	2	NRPGNALEK2			2037.59
P70617	P70617	NINJ1_RAT	Ninj1	Ninjurin-1	1	NRPINVNHYANK	NRPINVNHYANK	3	NRPINVNHYANK3	4381.6	9517.38	7060.44
P70617	P70617	NINJ1_RAT	Ninj1	Ninjurin-1	1	NRPINVNHYANKK	NRPINVNHYANKK	4	NRPINVNHYANKK4	11497.1		16914.1
F1MAF8	F1MAF8	F1MAF8_RAT	Atg2b	Autophagy related 2B	1	NRPMQQEDEYR	NRPMQQEDEYR	3	NRPMQQEDEYR3	5682.12	1182.78	
D3ZT51	D3ZT51	D3ZT51_RAT	Exosc3	Ribosomal RNA-processing protein 40	1	NRPNVQVGDLIYGQCVVANK	NRPNVQVGDLIYGQC(UniMod:4)VVANK	3	NRPNVQVGDLIYGQC(UniMod:4)VVANK3	2615.18	2104.58	
Q62733	Q62733	LAP2_RAT	Tmpo	Lamina-associated polypeptide 2, isoform beta	1	NRPPLAAGANSK	NRPPLAAGANSK	3	NRPPLAAGANSK3	5979.35	10091.3	
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	NRPPLEEEEEEE	NRPPLEEEEEEE	2	NRPPLEEEEEEE2	2.52658e+06	2.43836e+06	2.74361e+06
Q5FVQ9	Q5FVQ9	TBCE_RAT	Tbce	Tubulin-specific chaperone E	1	NRPSAEFLSAHPR	NRPSAEFLSAHPR	3	NRPSAEFLSAHPR3	14604.2	6410.44	10019.4
P15384	P63142;P10499;P15384;P15385;P17659	KCNA3_RAT	Kcna3	Potassium voltage-gated channel subfamily A member 3	0	NRPSFDAILYYYQSGGR	NRPSFDAILYYYQSGGR	3	NRPSFDAILYYYQSGGR3	97185.7	93741.4	122895
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	NRPSHVWLCDLPAASLNDQLPQHTFR	NRPSHVWLC(UniMod:4)DLPAASLNDQLPQHTFR	4	NRPSHVWLC(UniMod:4)DLPAASLNDQLPQHTFR4	7076.66	5828.78	1867.78
A0A8I6A5X2	A0A8I6A5X2	A0A8I6A5X2_RAT	Usp32	ubiquitinyl hydrolase 1	1	NRPSLFGMPLIVPCTVHTR	NRPSLFGMPLIVPC(UniMod:4)TVHTR	4	NRPSLFGMPLIVPC(UniMod:4)TVHTR4		20053.2	15068.7
P97829	P97829	CD47_RAT	Cd47	Leukocyte surface antigen CD47	1	NRPVSWFSTNEK	NRPVSWFSTNEK	2	NRPVSWFSTNEK2	3934.22	975.037	4188.08
P97829	P97829	CD47_RAT	Cd47	Leukocyte surface antigen CD47	1	NRPVSWFSTNEK	NRPVSWFSTNEK	3	NRPVSWFSTNEK3	87012.3	82333.1	97195.2
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	NRQEGLMISASLLSEGYLQPASDLSK	NRQEGLMISASLLSEGYLQPASDLSK	3	NRQEGLMISASLLSEGYLQPASDLSK3	266223	294120	294543
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	NRQEGLMISASLLSEGYLQPASDLSK	NRQEGLMISASLLSEGYLQPASDLSK	4	NRQEGLMISASLLSEGYLQPASDLSK4	2613.89	2992.98	
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	NRQEITDKDHTVSR	NRQEITDKDHTVSR	3	NRQEITDKDHTVSR3			6798.73
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	NRQEITDKDHTVSR	NRQEITDKDHTVSR	4	NRQEITDKDHTVSR4			11057.7
Q9JHU5	Q9JHU5	ARFP1_RAT	Arfip1	Arfaptin-1	1	NSAAEIPVTSNGEVGDAHEHGYNR	NSAAEIPVTSNGEVGDAHEHGYNR	4	NSAAEIPVTSNGEVGDAHEHGYNR4	4313.74		
D4A529	D4A529	D4A529_RAT	She	Src homology 2 domain containing E	1	NSAAELGGSR	NSAAELGGSR	2	NSAAELGGSR2	62506.5	45694	64756.3
B1WBV3	B1WBV3	B1WBV3_RAT	Gfod2	Glucose-fructose oxidoreductase domain containing 2	1	NSAAQEELLVR	NSAAQEELLVR	2	NSAAQEELLVR2	2330.78	2574.46	3795.67
P51111	P51111	HD_RAT	Htt	Huntingtin	1	NSAASGLFIQAIQSR	NSAASGLFIQAIQSR	2	NSAASGLFIQAIQSR2	15653.2	19017.1	11675.1
P51111	P51111	HD_RAT	Htt	Huntingtin	1	NSAASGLFIQAIQSR	NSAASGLFIQAIQSR	3	NSAASGLFIQAIQSR3	6323.13	6929.94	5341.03
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	NSAEGTEYFK	NSAEGTEYFK	2	NSAEGTEYFK2	32283.4	31631.7	17636.3
Q63364	Q63364	PJA2_RAT	Pja2	E3 ubiquitin-protein ligase Praja-2	1	NSAGDAEAVHQDGQEFQR	NSAGDAEAVHQDGQEFQR	3	NSAGDAEAVHQDGQEFQR3	5457.28	5916.63	6816.87
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	NSAGQAECSCQVTVDDAGTSENTK	NSAGQAEC(UniMod:4)SC(UniMod:4)QVTVDDAGTSENTK	3	NSAGQAEC(UniMod:4)SC(UniMod:4)QVTVDDAGTSENTK3	9336.42	6803.14	6854.15
A0A8I6AGL0	A0A8I6AGL0	A0A8I6AGL0_RAT	Ankrd44	Ankyrin repeat domain 44	1	NSALQTPLHIAAR	NSALQTPLHIAAR	3	NSALQTPLHIAAR3		6492.26	2651.51
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	NSASATTPLSGNSSR	NSASATTPLSGNSSR	2	NSASATTPLSGNSSR2	213797	190138	190631
Q9WUD2	Q9WUD2	TRPV2_RAT	Trpv2	Transient receptor potential cation channel subfamily V member 2	1	NSASEEDHLPLQVLQSP	NSASEEDHLPLQVLQSP	2	NSASEEDHLPLQVLQSP2	10067		4221.24
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	NSASGHPHCFFCHLELGSDR	NSASGHPHC(UniMod:4)FFC(UniMod:4)HLELGSDR	4	NSASGHPHC(UniMod:4)FFC(UniMod:4)HLELGSDR4	18670.4	18832	15958.2
F7F288	F7F288	F7F288_RAT	Bcap29	B-cell receptor-associated protein	1	NSASRPAAYEQAQMR	NSASRPAAYEQAQMR	3	NSASRPAAYEQAQMR3	15957.4	28875.3	21240.6
F7FPL2	F7FPL2	F7FPL2_RAT	Smoc2	SPARC related modular calcium binding 2	1	NSASSCDQEHQSALEEAK	NSASSC(UniMod:4)DQEHQSALEEAK	3	NSASSC(UniMod:4)DQEHQSALEEAK3	2973.67	5278.11	2551.54
D3ZWA1	D3ZWA1	D3ZWA1_RAT	Mindy2	Ubiquitin carboxyl-terminal hydrolase	1	NSASSSPVASEAPSR	NSASSSPVASEAPSR	2	NSASSSPVASEAPSR2	41620.8	30596	34629.1
Q63737	A0A8I6A6H0;Q63737	PHLP_RAT	Pdcl	Phosducin-like protein	0	NSATCHSEDSDLEID	NSATC(UniMod:4)HSEDSDLEID	2	NSATC(UniMod:4)HSEDSDLEID2	3144.07		3170.39
O08679	O08679	MARK2_RAT	Mark2	Serine/threonine-protein kinase MARK2	1	NSATSADEQPHIGNYR	NSATSADEQPHIGNYR	3	NSATSADEQPHIGNYR3	10884.3	9585.88	13500.8
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	NSCISEEER	NSC(UniMod:4)ISEEER	2	NSC(UniMod:4)ISEEER2		3591.34	
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	NSCISEEERDAYEELLTQAEIQSNIHAVNR	NSC(UniMod:4)ISEEERDAYEELLTQAEIQSNIHAVNR	4	NSC(UniMod:4)ISEEERDAYEELLTQAEIQSNIHAVNR4	3855.94	5597.52	6603.28
B4F7A3	B4F7A3	B4F7A3_RAT	Lgalsl	Galectin-like	1	NSCISGER	NSC(UniMod:4)ISGER	2	NSC(UniMod:4)ISGER2			9662.11
B5DFN2	B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	1	NSCIVCNMGHSNTEIDVTSLR	NSC(UniMod:4)IVC(UniMod:4)NMGHSNTEIDVTSLR	3	NSC(UniMod:4)IVC(UniMod:4)NMGHSNTEIDVTSLR3	68300	58919.7	61465.1
P23764	P23764	GPX3_RAT	Gpx3	Glutathione peroxidase 3	1	NSCPPTAELLGSPGR	NSC(UniMod:4)PPTAELLGSPGR	2	NSC(UniMod:4)PPTAELLGSPGR2	1.01906e+07	9.73546e+06	1.0341e+07
P23764	P23764	GPX3_RAT	Gpx3	Glutathione peroxidase 3	1	NSCPPTAELLGSPGR	NSC(UniMod:4)PPTAELLGSPGR	3	NSC(UniMod:4)PPTAELLGSPGR3	1.6259e+06	1.36794e+06	1.44471e+06
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	NSCSSPLR	NSC(UniMod:4)SSPLR	2	NSC(UniMod:4)SSPLR2	9781.01	15212.1	14902.6
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	NSDFQLQELQFHLLNTHLVAEVIAVATMR	NSDFQLQELQFHLLNTHLVAEVIAVATMR	4	NSDFQLQELQFHLLNTHLVAEVIAVATMR4		25326.8	7219.87
P48450	P48450	LSS_RAT	Lss	Lanosterol synthase	1	NSDGGFATYETK	NSDGGFATYETK	2	NSDGGFATYETK2	2832.29	10345.7	16358.9
D3ZE20	A0A0G2JTY4;D3Z9H7;D3ZE20	D3ZE20_RAT	Nfatc1	Nuclear factor of activated T-cells 1	0	NSDIELR	NSDIELR	2	NSDIELR2	12241.1	20111.7	19013.3
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	NSDIQGALDSITK	NSDIQGALDSITK	2	NSDIQGALDSITK2	95873.2	92794.6	87549.8
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	NSDISQSYR	NSDISQSYR	2	NSDISQSYR2	91092.5	67896.3	73275.4
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	NSDKDKWGDACDNCR	NSDKDKWGDAC(UniMod:4)DNC(UniMod:4)R	2	NSDKDKWGDAC(UniMod:4)DNC(UniMod:4)R2		801.338	
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	NSDKDKWGDACDNCR	NSDKDKWGDAC(UniMod:4)DNC(UniMod:4)R	3	NSDKDKWGDAC(UniMod:4)DNC(UniMod:4)R3			4224.34
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	NSDKDKWGDACDNCR	NSDKDKWGDAC(UniMod:4)DNC(UniMod:4)R	4	NSDKDKWGDAC(UniMod:4)DNC(UniMod:4)R4		30598.9	28751.9
B4F7E7	B4F7E7	PALS1_RAT	Pals1	Protein PALS1	1	NSDLKPYIIFIAPPSQER	NSDLKPYIIFIAPPSQER	3	NSDLKPYIIFIAPPSQER3	14618.1	22269.5	19007.6
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	NSDMHLLDLESMGK	NSDMHLLDLESMGK	2	NSDMHLLDLESMGK2	10715.6	13660.6	10446.1
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	NSDMHLLDLESMGK	NSDMHLLDLESMGK	3	NSDMHLLDLESMGK3	57645.6	73359	78223.6
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	NSDMHLLDMESMGK	NSDMHLLDMESMGK	3	NSDMHLLDMESMGK3		7943.15	4076.45
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	NSDSNLLSLDGLDNEVK	NSDSNLLSLDGLDNEVK	2	NSDSNLLSLDGLDNEVK2	5412.33	7773.15	3229.94
Q63663	Q63663	GBP2_RAT	Gbp2	Guanylate-binding protein 2	1	NSDVSSAHCSDLIEDIFGPLEEEVK	NSDVSSAHC(UniMod:4)SDLIEDIFGPLEEEVK	3	NSDVSSAHC(UniMod:4)SDLIEDIFGPLEEEVK3	4677.18	1571.42	5584.66
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	NSDYAIPK	NSDYAIPK	2	NSDYAIPK2	26032.8	29562.6	17609.7
A0A8I6A6I4	A0A8I6A6I4	A0A8I6A6I4_RAT	Atp11b	Phospholipid-transporting ATPase	1	NSDYAVAR	NSDYAVAR	2	NSDYAVAR2		2737.77	8370.38
A0A8I5ZV31	A0A8I5ZV31	A0A8I5ZV31_RAT	Atp11c	Phospholipid-transporting ATPase	1	NSDYSVPK	NSDYSVPK	2	NSDYSVPK2	5199.26	3613.64	3615.51
D3ZTW8	D3ZTW8	D3ZTW8_RAT	Mrpl27	Mitochondrial ribosomal protein L27	1	NSEAVNLVTSLPK	NSEAVNLVTSLPK	2	NSEAVNLVTSLPK2		2598.46	2399
Q4KLH3	Q4KLH3	OGRL1_RAT	Ogfrl1	Opioid growth factor receptor-like protein 1	1	NSEDDNAADQSESPPKK	NSEDDNAADQSESPPKK	3	NSEDDNAADQSESPPKK3			5123.68
Q4FZT2	Q4FZT2	PPME1_RAT	Ppme1	Protein phosphatase methylesterase 1	1	NSEDLSAETMAK	NSEDLSAETMAK	2	NSEDLSAETMAK2	11537.7	6891.09	6747.53
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	NSEEFASAMSR	NSEEFASAMSR	2	NSEEFASAMSR2	13622.9	10945.6	14399.7
A6Y7S3	A6Y7S3	A6Y7S3_RAT	Kctd8	Potassium channel tetramerization domain containing 8	1	NSELFQSLISK	NSELFQSLISK	2	NSELFQSLISK2	10428.8		4075.36
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	NSEQEVLQK	NSEQEVLQK	2	NSEQEVLQK2	10280.6	7750.86	3053.84
B0BNG0	B0BNG0	EMC2_RAT	Emc2	ER membrane protein complex subunit 2	1	NSEQIMEVGEELINDYASK	NSEQIMEVGEELINDYASK	3	NSEQIMEVGEELINDYASK3	13019	8375.73	13982.7
D4A529	D4A529	D4A529_RAT	She	Src homology 2 domain containing E	1	NSETGSAAPTPGK	NSETGSAAPTPGK	2	NSETGSAAPTPGK2	27144		23989.3
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	NSFASALR	NSFASALR	2	NSFASALR2	14774.6	14574.6	10451.7
F1LZW6	F1LX07;F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	0	NSFDCFK	NSFDC(UniMod:4)FK	2	NSFDC(UniMod:4)FK2	56615.4	45267	63558.6
F1LZW6	F1LX07;F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	0	NSFDCFKK	NSFDC(UniMod:4)FKK	2	NSFDC(UniMod:4)FKK2	17934.8	19932.6	24036.3
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	NSFDELSK	NSFDELSK	2	NSFDELSK2	27488.7	34590.4	16092.1
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	NSFERGEDPLVDDQNER	NSFERGEDPLVDDQNER	3	NSFERGEDPLVDDQNER3	18839.5	16969.4	13808.7
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	NSFERGEDPLVDDQNERDINSVAGVLK	NSFERGEDPLVDDQNERDINSVAGVLK	4	NSFERGEDPLVDDQNERDINSVAGVLK4	6539.83	14230.6	9975.3
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	NSFQCGIMCLR	NSFQC(UniMod:4)GIMC(UniMod:4)LR	2	NSFQC(UniMod:4)GIMC(UniMod:4)LR2	30653.7	21579.4	19318.6
D3ZU63	D3ZU63	D3ZU63_RAT	Stard13	StAR-related lipid transfer domain containing 13	1	NSFQPLVAEGPETK	NSFQPLVAEGPETK	2	NSFQPLVAEGPETK2		4289.44	
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	NSFQQVTNQLEEK	NSFQQVTNQLEEK	2	NSFQQVTNQLEEK2	5219.1		2463.53
A0A8I6A4U0	P20767;A0A8I6A4U0;A0A8I5ZZL6	A0A8I6A4U0_RAT	ENSRNOG00000064589	Ig-like domain-containing protein	0	NSFTCQVTHEGNTVEK	NSFTC(UniMod:4)QVTHEGNTVEK	2	NSFTC(UniMod:4)QVTHEGNTVEK2	98542.3	88059.1	75527
A0A8I6A4U0	P20767;A0A8I6A4U0;A0A8I5ZZL6	A0A8I6A4U0_RAT	ENSRNOG00000064589	Ig-like domain-containing protein	0	NSFTCQVTHEGNTVEK	NSFTC(UniMod:4)QVTHEGNTVEK	3	NSFTC(UniMod:4)QVTHEGNTVEK3	3.53785e+06	3.54495e+06	3.18095e+06
Q5PQN6	Q5PQN6	SPE39_RAT	Vipas39	Spermatogenesis-defective protein 39 homolog	1	NSFYTQLPKPPSTYSLSSFFR	NSFYTQLPKPPSTYSLSSFFR	3	NSFYTQLPKPPSTYSLSSFFR3	9776.4	5666.27	4291.85
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	NSGAIIHTVALGPSAAK	NSGAIIHTVALGPSAAK	2	NSGAIIHTVALGPSAAK2	1513.46	4697.9	1058.12
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	NSGAIIHTVALGPSAAK	NSGAIIHTVALGPSAAK	3	NSGAIIHTVALGPSAAK3	16169.4	17695.9	17226.4
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	NSGEEDPDSLQR	NSGEEDPDSLQR	2	NSGEEDPDSLQR2	29416.2	29534.6	28642.8
Q68G38	Q68G38	TOR1A_RAT	Tor1a	Torsin-1A	1	NSGFWHSSLIDR	NSGFWHSSLIDR	3	NSGFWHSSLIDR3	13342.8	12051.1	7351.17
Q01129	Q01129	PGS2_RAT	Dcn	Decorin	1	NSGIENGALQGMK	NSGIENGALQGMK	2	NSGIENGALQGMK2	17670	25663.7	12824.9
A0A0G2K8I5	A0A0G2K8I5	A0A0G2K8I5_RAT	Pcdh19	Protocadherin 19	1	NSGIGYLVTVVK	NSGIGYLVTVVK	2	NSGIGYLVTVVK2	7516.35	6498.85	7672.3
F1M1L9	F1M1L9	F1M1L9_RAT	Cpne2	Copine 2	1	NSGIIILR	NSGIIILR	2	NSGIIILR2	5443.63	6130.44	6279.83
P11348	P11348	DHPR_RAT	Qdpr	Dihydropteridine reductase	1	NSGMPSGAAAIAVLPVTLDTPMNR	NSGMPSGAAAIAVLPVTLDTPMNR	3	NSGMPSGAAAIAVLPVTLDTPMNR3	13116.7	19205.1	13381
P11348	P11348	DHPR_RAT	Qdpr	Dihydropteridine reductase	1	NSGMPSGAAAIAVLPVTLDTPMNRK	NSGMPSGAAAIAVLPVTLDTPMNRK	3	NSGMPSGAAAIAVLPVTLDTPMNRK3	6775.41		5446.08
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	NSGMVPSLEPFSEFHLTVLAYNSK	NSGMVPSLEPFSEFHLTVLAYNSK	3	NSGMVPSLEPFSEFHLTVLAYNSK3	16053.9	24314.8	16417.2
F1LYX9	F1LYX9	F1LYX9_RAT	Dsg2	Desmoglein 2	1	NSGPFTFSIIDQPPGTAQK	NSGPFTFSIIDQPPGTAQK	3	NSGPFTFSIIDQPPGTAQK3	31571.4	27007	19917.4
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	NSGQISCFLPTQGPEYGHALK	NSGQISC(UniMod:4)FLPTQGPEYGHALK	3	NSGQISC(UniMod:4)FLPTQGPEYGHALK3	22841.2	27465.1	26285.3
Q8VHV8	Q8VHV8	SELS_RAT	Selenos	Selenoprotein S	1	NSGRPQEEDGPGPSTSSVIPK	NSGRPQEEDGPGPSTSSVIPK	3	NSGRPQEEDGPGPSTSSVIPK3	2174.26	4981.96	4793.64
A0A8I6A5H5	A0A8I6A5H5	A0A8I6A5H5_RAT	Rela	RELA proto-oncogene, NF-kB subunit	1	NSGSCLGGDEIFLLCDK	NSGSC(UniMod:4)LGGDEIFLLC(UniMod:4)DK	2	NSGSC(UniMod:4)LGGDEIFLLC(UniMod:4)DK2	11534.5	6448.07	6121.73
D3ZFJ3	D3ZFJ3	3BP1_RAT	Sh3bp1	SH3 domain-binding protein 1	1	NSGSSQSLGGGSSSHTHMATANK	NSGSSQSLGGGSSSHTHMATANK	3	NSGSSQSLGGGSSSHTHMATANK3			4159.22
Q62762	Q62762	KC1G2_RAT	Csnk1g2	Casein kinase I isoform gamma-2	1	NSGTSSGVLMVGPNFR	NSGTSSGVLMVGPNFR	2	NSGTSSGVLMVGPNFR2	7832.91	8756.24	11630.8
D4A1R8	D4A1R8	CPNE1_RAT	Cpne1	Copine-1	1	NSGTVCVK	NSGTVC(UniMod:4)VK	2	NSGTVC(UniMod:4)VK2	18511.8	15882.4	
D3ZLA3	D3ZLA3	D3ZLA3_RAT	Cpne3	Copine 3	1	NSGVIVVK	NSGVIVVK	2	NSGVIVVK2	19911	13965.9	21184.3
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	NSGVLFENQLLQIGVK	NSGVLFENQLLQIGVK	2	NSGVLFENQLLQIGVK2	7649.13	7119.62	7392.94
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	NSGVLFENQLLQIGVK	NSGVLFENQLLQIGVK	3	NSGVLFENQLLQIGVK3		4208.16	3003.58
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	NSGVPDDIFK	NSGVPDDIFK	2	NSGVPDDIFK2	390309	429274	408500
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	NSHEFYAINGMIYNLPGLR	NSHEFYAINGMIYNLPGLR	3	NSHEFYAINGMIYNLPGLR3	3.37108e+06	3.81337e+06	3.99891e+06
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	NSHEFYAINGMIYNLPGLR	NSHEFYAINGMIYNLPGLR	4	NSHEFYAINGMIYNLPGLR4	107155	109783	97001.1
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	NSHEIETTLQDIK	NSHEIETTLQDIK	3	NSHEIETTLQDIK3	8254.76	5929.61	11988.5
A0A8I5ZMX2	A0A8I5ZMX2	A0A8I5ZMX2_RAT	Adamts3	ADAM metallopeptidase with thrombospondin type 1, motif 3	1	NSHFDYQNTK	NSHFDYQNTK	2	NSHFDYQNTK2		3543.29	
A0A8I5ZMX2	A0A8I5ZMX2	A0A8I5ZMX2_RAT	Adamts3	ADAM metallopeptidase with thrombospondin type 1, motif 3	1	NSHFDYQNTK	NSHFDYQNTK	3	NSHFDYQNTK3	3248.34		5000.93
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	NSHIALAFDDTK	NSHIALAFDDTK	3	NSHIALAFDDTK3	13877.8	9358.51	20537.1
P48548	P48548;P48550	KCNJ5_RAT	Kcnj5	G protein-activated inward rectifier potassium channel 4	0	NSHIVEASIR	NSHIVEASIR	2	NSHIVEASIR2	35594.8	35001.6	15790.3
Q6P9U8	Q6P9U8	EIF3H_RAT	Eif3h	Eukaryotic translation initiation factor 3 subunit H	1	NSHLINVLMWELEK	NSHLINVLMWELEK	2	NSHLINVLMWELEK2	33546.2	13621.3	7587.85
Q6P9U8	Q6P9U8	EIF3H_RAT	Eif3h	Eukaryotic translation initiation factor 3 subunit H	1	NSHLINVLMWELEK	NSHLINVLMWELEK	3	NSHLINVLMWELEK3	70871.3	49696.2	36682.2
A0A0G2JSU2	A0A0G2JSU2	A0A0G2JSU2_RAT	Adgra3	Adhesion G protein-coupled receptor A3	1	NSHSSGVYPGNTQDER	NSHSSGVYPGNTQDER	3	NSHSSGVYPGNTQDER3	3068.21	5662.56	
Q4V794	Q4V794	Q4V794_RAT	Vps37a	VPS37A subunit of ESCRT-I	1	NSHSSIAEIQK	NSHSSIAEIQK	3	NSHSSIAEIQK3	6791.16	6486.27	16752.5
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	NSIAELNSNINSVSETSSVTFQYLTLLK	NSIAELNSNINSVSETSSVTFQYLTLLK	4	NSIAELNSNINSVSETSSVTFQYLTLLK4	63421.6	53365.7	59628.9
P02466	P02466	CO1A2_RAT	Col1a2	Collagen alpha-2(I) chain	1	NSIAYLDEETGR	NSIAYLDEETGR	2	NSIAYLDEETGR2	11679.6	8395.89	7024.39
P13941	P13941	CO3A1_RAT	Col3a1	Collagen alpha-1(III) chain	1	NSIAYMDQANGNVK	NSIAYMDQANGNVK	2	NSIAYMDQANGNVK2	7746.61	4838.98	6962.28
D4ADF5	B1H286;D4ADF5	D4ADF5_RAT	Pdcd5	Programmed cell death 5	0	NSILAQVLDQSAR	NSILAQVLDQSAR	2	NSILAQVLDQSAR2	80189.8	79466.2	76229.6
D4ADF5	B1H286;D4ADF5	D4ADF5_RAT	Pdcd5	Programmed cell death 5	0	NSILAQVLDQSAR	NSILAQVLDQSAR	3	NSILAQVLDQSAR3	9714.78	6633.24	11424.7
G3V6U9	G3V6U9	SETD3_RAT	Setd3	Actin-histidine N-methyltransferase	1	NSILGPLYSQDR	NSILGPLYSQDR	2	NSILGPLYSQDR2	22012.7	24016.3	13847.6
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	NSINILWK	NSINILWK	2	NSINILWK2	25302.5	22006.6	39336.9
D4AAT1	D4AAT1	D4AAT1_RAT	Adamts8	ADAM metallopeptidase with thrombospondin type 1 motif, 8	1	NSINLVVVK	NSINLVVVK	2	NSINLVVVK2	2540.27	1621.48	
D3Z8E0	D3Z8E0	D3Z8E0_RAT	Rps6ka3	Ribosomal protein S6 kinase	1	NSIQFTDGYEVK	NSIQFTDGYEVK	2	NSIQFTDGYEVK2	4373.36	7231.44	4505.35
P47824	P47824	P2RX1_RAT	P2rx1	P2X purinoceptor 1	1	NSISFPR	NSISFPR	2	NSISFPR2	451868	428190	448438
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	NSISNFLHSLER	NSISNFLHSLER	3	NSISNFLHSLER3	6141.36	13959.6	10295.8
Q8VBX1	Q8VBX1	LIPE_RAT	Lipg	Endothelial lipase	1	NSISPGQELWFYK	NSISPGQELWFYK	2	NSISPGQELWFYK2	5166.6		
D3ZES7	D3ZPX4;D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	0	NSITDACLSVVAQTFMDSCSTSEHR	NSITDAC(UniMod:4)LSVVAQTFMDSC(UniMod:4)STSEHR	3	NSITDAC(UniMod:4)LSVVAQTFMDSC(UniMod:4)STSEHR3	16838.2	18620.8	12659.8
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	NSITLTNLNPGTEYIVTIIAVNGR	NSITLTNLNPGTEYIVTIIAVNGR	3	NSITLTNLNPGTEYIVTIIAVNGR3	35283	54054.7	734792
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	NSITLTNLNPGTEYIVTIIAVNGR	NSITLTNLNPGTEYIVTIIAVNGR	4	NSITLTNLNPGTEYIVTIIAVNGR4	10435.9	4900.42	14651.1
A0A0G2JWA3	A0A0G2JWA3	A0A0G2JWA3_RAT	Xpo7	Exportin 7	1	NSIVNSQPPEK	NSIVNSQPPEK	2	NSIVNSQPPEK2	6851.19	12702.1	8795.96
P20909	P20909	COBA1_RAT	Col11a1	Collagen alpha-1(XI) chain	1	NSKDPDIAYR	NSKDPDIAYR	3	NSKDPDIAYR3	52270.9	54435.9	77674.2
P11730	P08413;P11730	KCC2G_RAT	Camk2g	Calcium/calmodulin-dependent protein kinase type II subunit gamma	0	NSKPIHTTILNPHVHVIGEDAACIAYIR	NSKPIHTTILNPHVHVIGEDAAC(UniMod:4)IAYIR	4	NSKPIHTTILNPHVHVIGEDAAC(UniMod:4)IAYIR4	2755.95	4081.73	
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	NSLASADPPSAR	NSLASADPPSAR	2	NSLASADPPSAR2	375234	355802	416852
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	NSLCFPEDTEISK	NSLC(UniMod:4)FPEDTEISK	2	NSLC(UniMod:4)FPEDTEISK2	88796.6	62585.5	82202.6
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	NSLCIENSCIAAHDK	NSLC(UniMod:4)IENSC(UniMod:4)IAAHDK	2	NSLC(UniMod:4)IENSC(UniMod:4)IAAHDK2	22677	18015.4	15617.9
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	NSLCIENSCIAAHDK	NSLC(UniMod:4)IENSC(UniMod:4)IAAHDK	3	NSLC(UniMod:4)IENSC(UniMod:4)IAAHDK3	40129.4	37538.9	44358.1
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	NSLCIENSCIAAHDKK	NSLC(UniMod:4)IENSC(UniMod:4)IAAHDKK	3	NSLC(UniMod:4)IENSC(UniMod:4)IAAHDKK3	16595.2	23452	18679.5
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	NSLCIENSCIAAHDKK	NSLC(UniMod:4)IENSC(UniMod:4)IAAHDKK	4	NSLC(UniMod:4)IENSC(UniMod:4)IAAHDKK4	44661.5	46692.7	37187.1
Q62745	Q62745	CD81_RAT	Cd81	CD81 antigen	1	NSLCPSSSNSFTQLLK	NSLC(UniMod:4)PSSSNSFTQLLK	2	NSLC(UniMod:4)PSSSNSFTQLLK2	34797.7	42188.5	35979.1
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	NSLDCEIVSAK	NSLDC(UniMod:4)EIVSAK	2	NSLDC(UniMod:4)EIVSAK2	1.37743e+06	1.20832e+06	1.42022e+06
D3ZD11	D3ZD11	D3ZD11_RAT	Spcs2	Signal peptidase complex subunit 2	1	NSLDDSAK	NSLDDSAK	1	NSLDDSAK1	2643.08		6800.88
D3ZD11	D3ZD11	D3ZD11_RAT	Spcs2	Signal peptidase complex subunit 2	1	NSLDDSAK	NSLDDSAK	2	NSLDDSAK2	42836.5		133915
D3ZD11	D3ZD11	D3ZD11_RAT	Spcs2	Signal peptidase complex subunit 2	1	NSLDDSAKK	NSLDDSAKK	2	NSLDDSAKK2			53133.6
Q6P9U3	Q6P9U3	COMD3_RAT	Commd3	COMM domain-containing protein 3	1	NSLEILLGSIGR	NSLEILLGSIGR	2	NSLEILLGSIGR2	9243.33	13603.4	
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	NSLESYAFNMK	NSLESYAFNMK	2	NSLESYAFNMK2	794795	796121	861094
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	NSLETLLYKPVDR	NSLETLLYKPVDR	3	NSLETLLYKPVDR3	25562.9	44338.3	31328.8
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	NSLFDFQK	NSLFDFQK	2	NSLFDFQK2	85500.7	2.63377e+07	2.69971e+07
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	NSLFFSAQPFEITASTNNEGNLK	NSLFFSAQPFEITASTNNEGNLK	3	NSLFFSAQPFEITASTNNEGNLK3	26291.7	45894.3	31441
Q62991	Q62991	SCFD1_RAT	Scfd1	Sec1 family domain-containing protein 1	1	NSLFTGDPLGTGQFSFQRPLLVLVDR	NSLFTGDPLGTGQFSFQRPLLVLVDR	3	NSLFTGDPLGTGQFSFQRPLLVLVDR3	15487.5	12830.9	8468.55
P31720	P31720	C1QA_RAT	C1qa	Complement C1q subcomponent subunit A	1	NSLGFCDTNSK	NSLGFC(UniMod:4)DTNSK	2	NSLGFC(UniMod:4)DTNSK2	20896.7	29142.4	31452.3
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	NSLIELPDDYSCLLNQASHFR	NSLIELPDDYSC(UniMod:4)LLNQASHFR	3	NSLIELPDDYSC(UniMod:4)LLNQASHFR3	57327.8	47612.4	44440
P15087	P15087	CBPE_RAT	Cpe	Carboxypeptidase E	1	NSLINYLEQIHR	NSLINYLEQIHR	3	NSLINYLEQIHR3	5369.66	2594.73	2355.82
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	NSLLEHK	NSLLEHK	2	NSLLEHK2	252802	261354	239951
A0A8I6GIM3	A0A8I6GIM3	A0A8I6GIM3_RAT	Ntpcr	Nucleoside-triphosphatase, cancer-related	1	NSLLPDIVAVVQSSR	NSLLPDIVAVVQSSR	3	NSLLPDIVAVVQSSR3	1937.57	2624.84	
D3ZAZ0	D3ZAZ0	D3ZAZ0_RAT	Eif3m	Eukaryotic translation initiation factor 3 subunit M	1	NSLLSLSDT	NSLLSLSDT	1	NSLLSLSDT1	44207.7	35787.2	31069.2
D3ZAZ0	D3ZAZ0	D3ZAZ0_RAT	Eif3m	Eukaryotic translation initiation factor 3 subunit M	1	NSLLSLSDT	NSLLSLSDT	2	NSLLSLSDT2	9062.8	10684.4	13009.3
Q9EPX4	Q9EPX4	P2Y12_RAT	P2ry12	P2Y purinoceptor 12	1	NSLMSMLR	NSLMSMLR	2	NSLMSMLR2	28323.7	29821	28534.1
D3ZKE1	D3ZKE1	D3ZKE1_RAT	Uvrag	UV radiation resistance associated	1	NSLNPTWR	NSLNPTWR	2	NSLNPTWR2	8406.97	16698.9	4740.84
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	NSLPDALLPNLLDR	NSLPDALLPNLLDR	2	NSLPDALLPNLLDR2	54218.8	71358.5	71730.8
Q3KRD8	Q3KRD8	IF6_RAT	Eif6	Eukaryotic translation initiation factor 6	1	NSLPDSVQIR	NSLPDSVQIR	2	NSLPDSVQIR2	56348.5	30474.4	28087.7
A0A8I6A5B0	A0A8I6A5B0	A0A8I6A5B0_RAT	Hycc2	Family with sequence similarity 126, member B	1	NSLPFDAPDSSQEGQK	NSLPFDAPDSSQEGQK	2	NSLPFDAPDSSQEGQK2	4035.13	3677.42	2425.53
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	NSLPQIPTLNLESR	NSLPQIPTLNLESR	2	NSLPQIPTLNLESR2	60692.3	36713.9	56604.6
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	NSLQNLSQYPMTR	NSLQNLSQYPMTR	2	NSLQNLSQYPMTR2	14468.7	7610.85	6198.5
A0A8I6AQN7	A0A8I6AQN7	A0A8I6AQN7_RAT	Fcamr	Fc fragment of IgA and IgM receptor	1	NSLSGANALR	NSLSGANALR	2	NSLSGANALR2	12235	18222.5	15582.4
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	NSLSGSSTGSQEQR	NSLSGSSTGSQEQR	2	NSLSGSSTGSQEQR2	3022.34		5069.78
Q02769	Q02769	FDFT_RAT	Fdft1	Squalene synthase	1	NSLSNSLK	NSLSNSLK	2	NSLSNSLK2		10072.4	10267.5
Q5FVN0	Q5FVN0	MBOA5_RAT	Lpcat3	Lysophospholipid acyltransferase 5	1	NSLSSEQQK	NSLSSEQQK	2	NSLSSEQQK2			121342
Q498T9	Q498T9	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	1	NSLSVLSPK	NSLSVLSPK	2	NSLSVLSPK2	11984.9	11224.6	3831.58
P17425	P17425	HMCS1_RAT	Hmgcs1	Hydroxymethylglutaryl-CoA synthase, cytoplasmic	1	NSLSYDCIGR	NSLSYDC(UniMod:4)IGR	2	NSLSYDC(UniMod:4)IGR2	19609.5	10280.1	13051.7
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	NSLTAAAEDSHIQTR	NSLTAAAEDSHIQTR	2	NSLTAAAEDSHIQTR2	1907.91	4620.79	3768.36
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	NSLTAAAEDSHIQTR	NSLTAAAEDSHIQTR	3	NSLTAAAEDSHIQTR3	19847.4	25738.3	18427.4
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	NSLTFPDDNDISK	NSLTFPDDNDISK	2	NSLTFPDDNDISK2	35407.6	33277.5	39888.1
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	NSLTQEV	NSLTQEV	1	NSLTQEV1	36598.7	39411.3	25540.9
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	NSLTQEV	NSLTQEV	2	NSLTQEV2	18915.8	19417	18028.3
Q3ZU82	Q3ZU82	GOGA5_RAT	Golga5	Golgin subfamily A member 5	1	NSLVFQLER	NSLVFQLER	2	NSLVFQLER2	18285.9	20079.3	9794.14
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	NSLWHTGDTSDQVR	NSLWHTGDTSDQVR	2	NSLWHTGDTSDQVR2	351387	318391	243757
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	NSLWHTGDTSDQVR	NSLWHTGDTSDQVR	3	NSLWHTGDTSDQVR3	1.9436e+06	2.08032e+06	2.17408e+06
D3ZXT7	D3ZXT7	D3ZXT7_RAT	Timd4	T-cell immunoglobulin and mucin domain containing 4	1	NSMCWGR	NSMC(UniMod:4)WGR	2	NSMC(UniMod:4)WGR2	176598	197410	162179
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	NSMIALVENLASK	NSMIALVENLASK	2	NSMIALVENLASK2	46899.6	62305.6	51719.2
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	NSMIALVENLASK	NSMIALVENLASK	3	NSMIALVENLASK3	2676.92	5803.58	10370
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	NSMIKVPMLSSK	NSMIKVPMLSSK	2	NSMIKVPMLSSK2	6945.61	4496.45	4134.39
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	NSMIKVPMLSSK	NSMIKVPMLSSK	3	NSMIKVPMLSSK3	43860.2	47050.3	49803.6
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	NSNCFVEWIPNNVK	NSNC(UniMod:4)FVEWIPNNVK	2	NSNC(UniMod:4)FVEWIPNNVK2	24395.1	27495.8	25138.1
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	NSNCFVEWIPNNVK	NSNC(UniMod:4)FVEWIPNNVK	3	NSNC(UniMod:4)FVEWIPNNVK3	585469	664582	746961
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	NSNDPVTFTDKPTR	NSNDPVTFTDKPTR	2	NSNDPVTFTDKPTR2	4378.33	1207.9	3788.39
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	NSNDPVTFTDKPTR	NSNDPVTFTDKPTR	3	NSNDPVTFTDKPTR3	43402.7	47774.4	47719.3
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	NSNDVFSQNMFCSGDPTLK	NSNDVFSQNMFC(UniMod:4)SGDPTLK	3	NSNDVFSQNMFC(UniMod:4)SGDPTLK3	88558.8	81014.7	72573.5
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	NSNILEDLETLR	NSNILEDLETLR	2	NSNILEDLETLR2	117607	86802.2	149188
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	NSNILEDLETLR	NSNILEDLETLR	3	NSNILEDLETLR3		2744.47	4812.79
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	NSNLVGAAHEELQQSR	NSNLVGAAHEELQQSR	2	NSNLVGAAHEELQQSR2	6098.8	6514.23	3095.98
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	NSNLVGAAHEELQQSR	NSNLVGAAHEELQQSR	3	NSNLVGAAHEELQQSR3	71830.7	69080.1	56319.1
Q6MG61	Q6MG61	CLIC1_RAT	Clic1	Chloride intracellular channel protein 1	1	NSNPALNDNLEK	NSNPALNDNLEK	2	NSNPALNDNLEK2	253101	167077	199150
Q62848	Q62848	ARFG1_RAT	Arfgap1	ADP-ribosylation factor GTPase-activating protein 1	1	NSNSDGWESWEGASGEGR	NSNSDGWESWEGASGEGR	2	NSNSDGWESWEGASGEGR2	20818.2	28468	27531.9
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	NSNYCLPSYTAYK	NSNYC(UniMod:4)LPSYTAYK	2	NSNYC(UniMod:4)LPSYTAYK2	105076	98796.5	108554
A0A0G2JTX7	A0A0G2JTX7	A0A0G2JTX7_RAT	Col6a5	Collagen type VI alpha 5 chain	1	NSPAGQELK	NSPAGQELK	2	NSPAGQELK2	31086.1	29864.8	17202.5
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	NSPDNKIICSCTEGYQLAEDQK	NSPDNKIIC(UniMod:4)SC(UniMod:4)TEGYQLAEDQK	3	NSPDNKIIC(UniMod:4)SC(UniMod:4)TEGYQLAEDQK3	5539.79	14314.9	10452.5
P51111	P51111	HD_RAT	Htt	Huntingtin	1	NSPEFQK	NSPEFQK	2	NSPEFQK2	30330.1	49031.1	53326.5
Q62991	Q62991	SCFD1_RAT	Scfd1	Sec1 family domain-containing protein 1	1	NSPGEPVWK	NSPGEPVWK	2	NSPGEPVWK2	47595.7	52513.9	36078.6
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	NSPGNGSALGPR	NSPGNGSALGPR	2	NSPGNGSALGPR2	79048.7	78930.1	74671.6
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	NSPGVPAGAK	NSPGVPAGAK	1	NSPGVPAGAK1	2296.47	3365.31	
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	NSPGVPAGAK	NSPGVPAGAK	2	NSPGVPAGAK2	162916	138581	159669
A0A8I6G2U9	A0A8I6G2U9	A0A8I6G2U9_RAT	Sh3pxd2a	SH3 and PX domains 2A	1	NSPKSDSPK	NSPKSDSPK	1	NSPKSDSPK1			6312.18
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	NSPLVSR	NSPLVSR	2	NSPLVSR2	811990	812655	886950
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	NSPMEDLGAK	NSPMEDLGAK	2	NSPMEDLGAK2	46481.9	65295.8	32128.3
A0A8I6ACU6	A0A8I6ACU6	A0A8I6ACU6_RAT	Glcci1	Glucocorticoid induced 1	1	NSPNSGQSSALATLTVEQLSSR	NSPNSGQSSALATLTVEQLSSR	3	NSPNSGQSSALATLTVEQLSSR3	4559.75	6260.26	5116.72
Q8K4S7	Q8K4S7	CBLB_RAT	Cblb	E3 ubiquitin-protein ligase CBL-B	1	NSPPYILDILPDTYQHLR	NSPPYILDILPDTYQHLR	3	NSPPYILDILPDTYQHLR3	100606	84447.9	111214
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	NSPQCPESMEVR	NSPQC(UniMod:4)PESMEVR	2	NSPQC(UniMod:4)PESMEVR2	25457.5	34825.7	30411.3
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	NSPRPSPK	NSPRPSPK	2	NSPRPSPK2			2370.56
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	NSPSLQSPNPGSSTPALSSGGILGLSR	NSPSLQSPNPGSSTPALSSGGILGLSR	3	NSPSLQSPNPGSSTPALSSGGILGLSR3		2623.4	5386.08
D3Z7Z4	D3Z7Z4	D3Z7Z4_RAT	Lipt1	Lipoyltransferase 1	1	NSPSVVIGR	NSPSVVIGR	2	NSPSVVIGR2	4326.28	4173.66	4381.36
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	NSPYIQVLEEDWR	NSPYIQVLEEDWR	2	NSPYIQVLEEDWR2	20636.4	17429.1	26531.6
Q5PQQ8	Q5PQQ8	ITGBL_RAT	Itgbl1	Integrin beta-like protein 1	1	NSQDVICSNAGTCHCGR	NSQDVIC(UniMod:4)SNAGTC(UniMod:4)HC(UniMod:4)GR	2	NSQDVIC(UniMod:4)SNAGTC(UniMod:4)HC(UniMod:4)GR2	1594.61		2116.51
Q5PQQ8	Q5PQQ8	ITGBL_RAT	Itgbl1	Integrin beta-like protein 1	1	NSQDVICSNAGTCHCGR	NSQDVIC(UniMod:4)SNAGTC(UniMod:4)HC(UniMod:4)GR	3	NSQDVIC(UniMod:4)SNAGTC(UniMod:4)HC(UniMod:4)GR3	43151.8	32057.8	36227.8
Q5BJM5	Q5BJM5	PKHO1_RAT	Plekho1	Pleckstrin homology domain-containing family O member 1	1	NSQEVFDLSDYEK	NSQEVFDLSDYEK	2	NSQEVFDLSDYEK2	9961.12	7521.34	7364.8
P70615	P70615	LMNB1_RAT	Lmnb1	Lamin-B1	1	NSQGEEVAQR	NSQGEEVAQR	2	NSQGEEVAQR2			17893.6
P62501	P62501;A0A8I6A360	T22D1_RAT	Tsc22d1	TSC22 domain family protein 1	0	NSQLEQENNLLK	NSQLEQENNLLK	2	NSQLEQENNLLK2	37063.6	33729.1	34852.2
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	NSQLTFYK	NSQLTFYK	2	NSQLTFYK2	21904.3	33507	30643.7
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	NSQLTGGFTVEPVPDGAR	NSQLTGGFTVEPVPDGAR	2	NSQLTGGFTVEPVPDGAR2	55127.6	61468.1	40895.8
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	NSQLTGGFTVEPVPDGAR	NSQLTGGFTVEPVPDGAR	3	NSQLTGGFTVEPVPDGAR3	17492.6	13060.3	19049.3
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	NSQNPNSEAVLLPVAVR	NSQNPNSEAVLLPVAVR	2	NSQNPNSEAVLLPVAVR2	2.69135e+06	2.77224e+06	2.87272e+06
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	NSQNPNSEAVLLPVAVR	NSQNPNSEAVLLPVAVR	3	NSQNPNSEAVLLPVAVR3	1.63474e+06	1.75563e+06	1.92435e+06
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	NSQPFLVLPK	NSQPFLVLPK	2	NSQPFLVLPK2	67129.1	66656	67490.4
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	NSQSFFSGLFGGSSK	NSQSFFSGLFGGSSK	2	NSQSFFSGLFGGSSK2	137551	131537	129508
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	NSQSFFSGLFGGSSK	NSQSFFSGLFGGSSK	3	NSQSFFSGLFGGSSK3	7319.75	4472.33	2681.54
Q5XIJ4	Q5XIJ4	F210A_RAT	Fam210a	Protein FAM210A	1	NSQSGNALTAYAMFK	NSQSGNALTAYAMFK	2	NSQSGNALTAYAMFK2		6739.63	4236.44
Q9Z0W7	Q9Z0W7	CLIC4_RAT	Clic4	Chloride intracellular channel protein 4	1	NSRPEANEALER	NSRPEANEALER	2	NSRPEANEALER2	4669.39	600.579	2547.98
Q9Z0W7	Q9Z0W7	CLIC4_RAT	Clic4	Chloride intracellular channel protein 4	1	NSRPEANEALER	NSRPEANEALER	3	NSRPEANEALER3	224826	161254	211512
D4A415	D4A415	D4A415_RAT	Abraxas2	Abraxas 2, BRISC complex subunit	1	NSRPTTHPDEDPR	NSRPTTHPDEDPR	3	NSRPTTHPDEDPR3			19746.9
Q4KLH3	Q4KLH3	OGRL1_RAT	Ogfrl1	Opioid growth factor receptor-like protein 1	1	NSSAASHLNNK	NSSAASHLNNK	2	NSSAASHLNNK2			10414.7
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	NSSGANLQGELSHVIR	NSSGANLQGELSHVIR	2	NSSGANLQGELSHVIR2		1551.54	
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	NSSGANLQGELSHVIR	NSSGANLQGELSHVIR	3	NSSGANLQGELSHVIR3	6844.22	7386.49	6988.67
Q5M7A4	Q5M7A4	UBA5_RAT	Uba5	Ubiquitin-like modifier-activating enzyme 5	1	NSSGPVPTLPEGITVAYTVPK	NSSGPVPTLPEGITVAYTVPK	3	NSSGPVPTLPEGITVAYTVPK3	8026.48	5178.21	26593.4
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	NSSGWWQGELQAR	NSSGWWQGELQAR	2	NSSGWWQGELQAR2	4761.61	3094.94	
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	NSSHAGAFVIVTEEAIAK	NSSHAGAFVIVTEEAIAK	3	NSSHAGAFVIVTEEAIAK3	12534.7	10250.7	8900.67
P60570	P60570	PANX1_RAT	Panx1	Pannexin-1	1	NSSHLIMK	NSSHLIMK	2	NSSHLIMK2	2475.03		968.143
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	NSSHLPR	NSSHLPR	2	NSSHLPR2			9059.37
P14270	P14270	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	1	NSSIASDIHGDDLIVTPFAQVLASLR	NSSIASDIHGDDLIVTPFAQVLASLR	3	NSSIASDIHGDDLIVTPFAQVLASLR3	2843.25	2646.56	
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	NSSIIGDYK	NSSIIGDYK	2	NSSIIGDYK2	42241.3	67696.6	66532.7
Q6AXV4	Q6AXV4	SAM50_RAT	Samm50	Sorting and assembly machinery component 50 homolog	1	NSSILPR	NSSILPR	2	NSSILPR2	70061.7	79409.2	86217.7
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	NSSINEGSTYHR	NSSINEGSTYHR	2	NSSINEGSTYHR2	22445	21416.2	
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	NSSINEGSTYHR	NSSINEGSTYHR	3	NSSINEGSTYHR3	47186.7	44262.1	
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	NSSIQLK	NSSIQLK	2	NSSIQLK2	17756.1	29299.6	26328
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	NSSLAEFVQSLSQTMGFPQDQIR	NSSLAEFVQSLSQTMGFPQDQIR	3	NSSLAEFVQSLSQTMGFPQDQIR3	4629.63	721.843	
P51111	P51111	HD_RAT	Htt	Huntingtin	1	NSSLALQQAHLLER	NSSLALQQAHLLER	3	NSSLALQQAHLLER3	50919.7	85532.6	81047.1
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	NSSLASSR	NSSLASSR	2	NSSLASSR2			85155.3
A0A0G2K1A4	A0A0G2K1A4	A0A0G2K1A4_RAT	Evi5l	Ecotropic viral integration site 5-like	1	NSSLPDENNVAR	NSSLPDENNVAR	2	NSSLPDENNVAR2	13850	10641.4	12409.7
A0A8I6ANI3	A0A8I6ANI3	A0A8I6ANI3_RAT	Ctla2a	Cytotoxic T lymphocyte-associated protein 2 alpha	1	NSSLTPER	NSSLTPER	2	NSSLTPER2	74223.1	65396.8	57752.4
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	NSSNAGVGSPSNTIGR	NSSNAGVGSPSNTIGR	2	NSSNAGVGSPSNTIGR2	35156.8	33867.2	23294.2
D3ZYR1	D3ZYR1	FCHO2_RAT	Fcho2	F-BAR domain only protein 2	1	NSSNEELTK	NSSNEELTK	2	NSSNEELTK2	11925.7	25270.5	19517.7
Q9WUD2	Q9WUD2	TRPV2_RAT	Trpv2	Transient receptor potential cation channel subfamily V member 2	1	NSSPQIK	NSSPQIK	2	NSSPQIK2	20673.6	20218.9	27131.3
D3ZMV1	D3ZMV1	D3ZMV1_RAT	Sla2	Src-like-adaptor 2	1	NSSPSSSSSFSGPGQEPVSIQAER	NSSPSSSSSFSGPGQEPVSIQAER	3	NSSPSSSSSFSGPGQEPVSIQAER3			2173.13
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	NSSQFFQSYVER	NSSQFFQSYVER	2	NSSQFFQSYVER2	53071.7	61736.1	57354.1
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	NSSQFFQSYVER	NSSQFFQSYVER	3	NSSQFFQSYVER3	6004.03	10874.4	13383.6
Q5M9G8	Q5M9G8	DCA11_RAT	Dcaf11	DDB1- and CUL4-associated factor 11	1	NSSSAGSGSLEPSEGLSR	NSSSAGSGSLEPSEGLSR	2	NSSSAGSGSLEPSEGLSR2	12657	8930.39	7784.62
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	NSSSAVSPLYSPVSFCGIPGGVLQNK	NSSSAVSPLYSPVSFC(UniMod:4)GIPGGVLQNK	3	NSSSAVSPLYSPVSFC(UniMod:4)GIPGGVLQNK3	5591.57	10245.6	17603.6
P14604	P14604	ECHM_RAT	Echs1	Enoyl-CoA hydratase, mitochondrial	1	NSSVGLIQLNRPK	NSSVGLIQLNRPK	2	NSSVGLIQLNRPK2	4008.96	10679.3	8697.87
P14604	P14604	ECHM_RAT	Echs1	Enoyl-CoA hydratase, mitochondrial	1	NSSVGLIQLNRPK	NSSVGLIQLNRPK	3	NSSVGLIQLNRPK3	57305.6	55836	88254.1
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	NSSWYSSGPR	NSSWYSSGPR	2	NSSWYSSGPR2	34502.3	34106.3	33899.6
D3ZYS7	D3ZYS7	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	1	NSSYAHGGLDSNGKPADAVYGQK	NSSYAHGGLDSNGKPADAVYGQK	3	NSSYAHGGLDSNGKPADAVYGQK3	6110.55	7880.08	6353.42
D3ZYS7	D3ZYS7	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	1	NSSYAHGGLDSNGKPADAVYGQK	NSSYAHGGLDSNGKPADAVYGQK	4	NSSYAHGGLDSNGKPADAVYGQK4	7311.17	7134.27	6278.94
P85108	P69897;Q4QRB4;Q6P9T8;B4F7C2;P85108;Q4QQV0;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	NSSYFVEWIPNNVK	NSSYFVEWIPNNVK	2	NSSYFVEWIPNNVK2	1.34896e+07	1.38858e+07	1.53263e+07
P85108	P69897;Q4QRB4;Q6P9T8;B4F7C2;P85108;Q4QQV0;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	NSSYFVEWIPNNVK	NSSYFVEWIPNNVK	3	NSSYFVEWIPNNVK3	1.06948e+06	1.23412e+06	1.40455e+06
F7F5P9	F7F5P9	F7F5P9_RAT	G3bp2	G3BP stress granule assembly factor 2	1	NSSYVHGGVDASGKPQEAVYGQNDIHHK	NSSYVHGGVDASGKPQEAVYGQNDIHHK	4	NSSYVHGGVDASGKPQEAVYGQNDIHHK4	8065.11	6705.38	2700.89
P51111	P51111	HD_RAT	Htt	Huntingtin	1	NSSYWLVR	NSSYWLVR	2	NSSYWLVR2	9227.84	11673.3	6430.08
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	NSTFAEEFAHSIR	NSTFAEEFAHSIR	2	NSTFAEEFAHSIR2		7369.16	8006.5
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	NSTFAEEFAHSIR	NSTFAEEFAHSIR	3	NSTFAEEFAHSIR3	15494.7	25467	12994.8
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	NSTFSELFK	NSTFSELFK	2	NSTFSELFK2	69523.4	58154.9	55988.6
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	NSTGSQDGPVSNPSSSNSSQDSLHK	NSTGSQDGPVSNPSSSNSSQDSLHK	3	NSTGSQDGPVSNPSSSNSSQDSLHK3	22088.4	34242.4	14945.3
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	NSTHTSVSPAIESSR	NSTHTSVSPAIESSR	2	NSTHTSVSPAIESSR2	3994.27	2991.37	
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	NSTHTSVSPAIESSR	NSTHTSVSPAIESSR	3	NSTHTSVSPAIESSR3	35501.3	31578.2	39482.4
A0A8I5ZV26	A0A8I5ZV26	A0A8I5ZV26_RAT	Stom	Stomatin	1	NSTIVFPLPIDMLQGIMGSHH	NSTIVFPLPIDMLQGIMGSHH	3	NSTIVFPLPIDMLQGIMGSHH3	85442.4	82596.8	88805.7
A0A8I6GAD6	A0A8I6GAD6	A0A8I6GAD6_RAT	Nrbp1	Nuclear receptor binding protein 1	1	NSTLNSAAVTVSS	NSTLNSAAVTVSS	2	NSTLNSAAVTVSS2	6338.59	5874.34	
P51111	P51111	HD_RAT	Htt	Huntingtin	1	NSTLPSFLTAVLK	NSTLPSFLTAVLK	2	NSTLPSFLTAVLK2	28851.1	41009.1	27450.4
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	NSTLSQVLR	NSTLSQVLR	2	NSTLSQVLR2	75183.7	81147.2	64450.1
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	NSTLTSLCVLSHYPFFSTFR	NSTLTSLC(UniMod:4)VLSHYPFFSTFR	3	NSTLTSLC(UniMod:4)VLSHYPFFSTFR3	11775.9	9769.87	7506.46
D4AE80	D4AE80	D4AE80_RAT	Dcp1a	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	NSTMMQAVR	NSTMMQAVR	2	NSTMMQAVR2	12714.7	5683.11	5281.99
Q8VHK7	Q8VHK7	HDGF_RAT	Hdgf	Hepatoma-derived growth factor	1	NSTPSEPDSGQGPPPEEEEGEEEAAK	NSTPSEPDSGQGPPPEEEEGEEEAAK	3	NSTPSEPDSGQGPPPEEEEGEEEAAK3		2321.13	2509.04
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	NSTQHLGPVHR	NSTQHLGPVHR	2	NSTQHLGPVHR2	6763.02	6226.87	6816.75
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	NSTQHLGPVHR	NSTQHLGPVHR	3	NSTQHLGPVHR3	14546.3	9805.96	14336.7
A0A096MJ11	A0A096MJ11	A0A096MJ11_RAT	Gsdmd	Gasdermin D	1	NSTSFKPYCLLSR	NSTSFKPYC(UniMod:4)LLSR	3	NSTSFKPYC(UniMod:4)LLSR3	10882.3	14674.8	11948.9
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	NSTSSIEPR	NSTSSIEPR	2	NSTSSIEPR2	25605.7	19686.1	28069.1
Q8K4V4	Q8K4V4	SNX27_RAT	Snx27	Sorting nexin-27	1	NSTTDQVYQAIAAK	NSTTDQVYQAIAAK	2	NSTTDQVYQAIAAK2	4270.48	9565.25	9405.01
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	NSTTLPR	NSTTLPR	2	NSTTLPR2	486432	400063	473927
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	NSTTLVMHMK	NSTTLVMHMK	2	NSTTLVMHMK2	65691.6	86273.2	
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	NSTYFPGK	NSTYFPGK	2	NSTYFPGK2	38930.5	27195.5	42631.3
P02454	P02454	CO1A1_RAT	Col1a1	Collagen alpha-1(I) chain	1	NSVAYMDQQTGNLK	NSVAYMDQQTGNLK	2	NSVAYMDQQTGNLK2	6207.38	3903.88	
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	NSVCHTATVIANSFMHCGTTSDQFLR	NSVC(UniMod:4)HTATVIANSFMHC(UniMod:4)GTTSDQFLR	4	NSVC(UniMod:4)HTATVIANSFMHC(UniMod:4)GTTSDQFLR4	33538.5	37711.7	35311.9
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	NSVELLVEDR	NSVELLVEDR	2	NSVELLVEDR2	4794.08	3854.66	2818.67
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	NSVEVALNK	NSVEVALNK	2	NSVEVALNK2	16769.5	12315.8	15034.4
Q32KK2	Q32KK2	Q32KK2_RAT	Arsa	Arylsulfatase A	1	NSVFFYPPFPDEIHGVFAVR	NSVFFYPPFPDEIHGVFAVR	3	NSVFFYPPFPDEIHGVFAVR3		2586.71	
P06685	P06687;P06685;P06686	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	0	NSVFQQGMK	NSVFQQGMK	2	NSVFQQGMK2	65680.9	59979.7	78392.7
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	NSVFSVLDEEISK	NSVFSVLDEEISK	2	NSVFSVLDEEISK2	61723.4	57719.4	51912.6
Q9JKW1	Q9JKW1	TIM22_RAT	Timm22	Mitochondrial import inner membrane translocase subunit Tim22	1	NSVISGCITGGAIGFR	NSVISGC(UniMod:4)ITGGAIGFR	2	NSVISGC(UniMod:4)ITGGAIGFR2	5974.32		5521.42
Q9WUD2	Q9WUD2	TRPV2_RAT	Trpv2	Transient receptor potential cation channel subfamily V member 2	1	NSVLEIIAFHCK	NSVLEIIAFHC(UniMod:4)K	2	NSVLEIIAFHC(UniMod:4)K2	2794.24	6145.9	4672.49
Q9WUD2	Q9WUD2	TRPV2_RAT	Trpv2	Transient receptor potential cation channel subfamily V member 2	1	NSVLEIIAFHCK	NSVLEIIAFHC(UniMod:4)K	3	NSVLEIIAFHC(UniMod:4)K3	19720.1	24369.1	16656.3
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	NSVLMSGFSHK	NSVLMSGFSHK	2	NSVLMSGFSHK2	39361.8	42187.4	39759.3
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	NSVLMSGFSHK	NSVLMSGFSHK	3	NSVLMSGFSHK3	82302.6	88933.3	107224
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	NSVLPMVYR	NSVLPMVYR	2	NSVLPMVYR2	49281.2	61465	48270.8
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	NSVMAVLQALELLLIR	NSVMAVLQALELLLIR	3	NSVMAVLQALELLLIR3	4750.38		
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	NSVPAVEGEQAGMR	NSVPAVEGEQAGMR	2	NSVPAVEGEQAGMR2	28151.5	30145	22021.5
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	NSVSQISVLSGGK	NSVSQISVLSGGK	2	NSVSQISVLSGGK2	253348	237456	265282
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	NSVSQISVLSGGK	NSVSQISVLSGGK	3	NSVSQISVLSGGK3		2286.38	
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	NSVSTALEHTLSALLTPAEQTSSWK	NSVSTALEHTLSALLTPAEQTSSWK	3	NSVSTALEHTLSALLTPAEQTSSWK3	1.06074e+06	1.1615e+06	1.20075e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	NSVSTALEHTLSALLTPAEQTSSWK	NSVSTALEHTLSALLTPAEQTSSWK	4	NSVSTALEHTLSALLTPAEQTSSWK4	69777.3	69004.5	67278.6
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	NSVTGGTAAFEPSLDYCVVK	NSVTGGTAAFEPSLDYC(UniMod:4)VVK	3	NSVTGGTAAFEPSLDYC(UniMod:4)VVK3	6749.11	4665.91	5529.48
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	NSVVEASEAAYK	NSVVEASEAAYK	2	NSVVEASEAAYK2	79298.2	84446.3	90600
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	NSVVEASEAAYK	NSVVEASEAAYK	3	NSVVEASEAAYK3	11454.7	13886.4	10359.3
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	NSVVEASEAAYKEAFEISK	NSVVEASEAAYKEAFEISK	3	NSVVEASEAAYKEAFEISK3	83143.6	119982	156942
D4A6U4	D4A6U4	D4A6U4_RAT	Tecpr2	Tectonin beta-propeller repeat containing 2	1	NSVVWALTEQR	NSVVWALTEQR	2	NSVVWALTEQR2	7815.87	9655.36	8089.5
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	NSWELHER	NSWELHER	2	NSWELHER2	5704.37	6480.33	12070.3
B0BNB9	B0BNB9	B0BNB9_RAT	Htra2	HtrA serine peptidase 2	1	NSWFGISGSQR	NSWFGISGSQR	2	NSWFGISGSQR2	39973.3	32181.1	32256.6
Q561Q9	Q561Q9	Q561Q9_RAT	Ctsw	Cathepsin W	1	NSWGAEWGEK	NSWGAEWGEK	2	NSWGAEWGEK2	45265.1	51684.4	48469.6
Q9R1T3	Q9R1T3	CATZ_RAT	Ctsz	Cathepsin Z	1	NSWGEPWGER	NSWGEPWGER	2	NSWGEPWGER2	88544.2	65956.5	71229.9
P80067	P80067	CATC_RAT	Ctsc	Dipeptidyl peptidase 1	1	NSWGSQWGESGYFR	NSWGSQWGESGYFR	2	NSWGSQWGESGYFR2	5460.52	5492.67	8665.56
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	NSWKDPALCCTLSPGDK	NSWKDPALC(UniMod:4)C(UniMod:4)TLSPGDK	2	NSWKDPALC(UniMod:4)C(UniMod:4)TLSPGDK2	206592	141191	104124
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	NSWKDPALCCTLSPGDK	NSWKDPALC(UniMod:4)C(UniMod:4)TLSPGDK	3	NSWKDPALC(UniMod:4)C(UniMod:4)TLSPGDK3	318752	251814	251655
A0A0G2JZA7	A0A0G2JZA7	A0A0G2JZA7_RAT	Cemip2	hyaluronoglucosaminidase	1	NSWQTTPR	NSWQTTPR	2	NSWQTTPR2	4072.55	9331.95	8766.2
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	NSWSTVEANVACFDLGFPLGVR	NSWSTVEANVAC(UniMod:4)FDLGFPLGVR	3	NSWSTVEANVAC(UniMod:4)FDLGFPLGVR3	60513.4	53279.4	50493.3
D3ZKE1	D3ZKE1	D3ZKE1_RAT	Uvrag	UV radiation resistance associated	1	NSYDVFSLLR	NSYDVFSLLR	2	NSYDVFSLLR2	11828	12946.8	12017.8
A0A0G2JVT8	A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	1	NSYISDTLGQVYK	NSYISDTLGQVYK	2	NSYISDTLGQVYK2	12974.5	5869.82	11926.4
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	NSYLEVLLK	NSYLEVLLK	2	NSYLEVLLK2	1.06715e+06	1.08424e+06	983268
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	NSYPDVAVGSLSDSVTIFR	NSYPDVAVGSLSDSVTIFR	3	NSYPDVAVGSLSDSVTIFR3	9476.69	13190.7	14725.4
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	NSYPHFYDGSEIVVAGR	NSYPHFYDGSEIVVAGR	2	NSYPHFYDGSEIVVAGR2	4.88652e+06	4.57168e+06	4.42967e+06
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	NSYPHFYDGSEIVVAGR	NSYPHFYDGSEIVVAGR	3	NSYPHFYDGSEIVVAGR3	4.29644e+06	5.00717e+06	4.49779e+06
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	NSYPHFYDGSEIVVAGR	NSYPHFYDGSEIVVAGR	4	NSYPHFYDGSEIVVAGR4	430421	505881	484726
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	NSYPHFYDGSEIVVAGRLVDRNVDNFK	NSYPHFYDGSEIVVAGRLVDRNVDNFK	4	NSYPHFYDGSEIVVAGRLVDRNVDNFK4	8899.9	10191.6	12949.9
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	NSYQDAEDK	NSYQDAEDK	2	NSYQDAEDK2			44656.6
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	NSYSIATK	NSYSIATK	1	NSYSIATK1	14714.1	13071.6	16806.2
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	NSYSIATK	NSYSIATK	2	NSYSIATK2	895714	991671	934506
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	NSYVAGQYDDPASYK	NSYVAGQYDDPASYK	2	NSYVAGQYDDPASYK2	150921	124306	124673
B5DF86	B5DF86	B5DF86_RAT	Cog8	Conserved oligomeric Golgi complex subunit 8	1	NSYYEEALELAAYVR	NSYYEEALELAAYVR	2	NSYYEEALELAAYVR2	1136.08	1435.5	1866.97
B5DF86	B5DF86	B5DF86_RAT	Cog8	Conserved oligomeric Golgi complex subunit 8	1	NSYYEEALELAAYVR	NSYYEEALELAAYVR	3	NSYYEEALELAAYVR3	8640.21	5054.92	4650.27
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	NTAAWAK	NTAAWAK	1	NTAAWAK1	330538	252252	251398
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	NTAAWAK	NTAAWAK	2	NTAAWAK2	2.42387e+06	2.80976e+06	3.05854e+06
P04166	P04166	CYB5B_RAT	Cyb5b	Cytochrome b5 type B	1	NTAEETWMVIHGR	NTAEETWMVIHGR	2	NTAEETWMVIHGR2	4568.37	5476.5	
P04166	P04166	CYB5B_RAT	Cyb5b	Cytochrome b5 type B	1	NTAEETWMVIHGR	NTAEETWMVIHGR	3	NTAEETWMVIHGR3	37071.6	31679.9	46468.1
Q99PD4	Q99PD4	ARC1A_RAT	Arpc1a	Actin-related protein 2/3 complex subunit 1A	1	NTALETLHQNSITQVSIYEVDK	NTALETLHQNSITQVSIYEVDK	3	NTALETLHQNSITQVSIYEVDK3	27654.4	15457.5	26100.1
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	NTALHLACGK	NTALHLAC(UniMod:4)GK	2	NTALHLAC(UniMod:4)GK2	1198.27	4143.77	2928.08
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	NTAMGLEEETHAHYIDVAR	NTAMGLEEETHAHYIDVAR	4	NTAMGLEEETHAHYIDVAR4	4259.74	5596.04	4397.85
A0A8J8YP33	A0A8I6AML9;A0A8J8YP33	A0A8J8YP33_RAT	Haus2	Similar to Centrosomal protein of 27 kDa (Cep27 protein)	0	NTAPCFVNFSR	NTAPC(UniMod:4)FVNFSR	2	NTAPC(UniMod:4)FVNFSR2	4829.35	7894.31	8685.09
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	NTAPPTEEETVPGK	NTAPPTEEETVPGK	2	NTAPPTEEETVPGK2	124849	105367	115797
Q9QX79	Q9QX79	FETUB_RAT	Fetub	Fetuin-B	1	NTAPTSSPSITAPR	NTAPTSSPSITAPR	2	NTAPTSSPSITAPR2	365315	333471	412580
Q9QX79	Q9QX79	FETUB_RAT	Fetub	Fetuin-B	1	NTAPTSSPSITAPR	NTAPTSSPSITAPR	3	NTAPTSSPSITAPR3	15485	14919.4	15808.5
G3V8Z6	G3V8Z6	G3V8Z6_RAT	Krit1	KRIT1, ankyrin repeat containing	1	NTASLNSR	NTASLNSR	2	NTASLNSR2	12790.1		9696.88
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	NTATNEVGWFPCNR	NTATNEVGWFPC(UniMod:4)NR	2	NTATNEVGWFPC(UniMod:4)NR2	55980.9	66361.4	42465.9
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	NTATNEVGWFPCNR	NTATNEVGWFPC(UniMod:4)NR	3	NTATNEVGWFPC(UniMod:4)NR3	9924.02		7430.41
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	NTAYEWIR	NTAYEWIR	2	NTAYEWIR2	38294.1	34274.9	38876.6
P97694	P97694	CYH1_RAT	Cyth1	Cytohesin-1	1	NTCEDIAQFLYK	NTC(UniMod:4)EDIAQFLYK	2	NTC(UniMod:4)EDIAQFLYK2	7900.1	14097	15670.1
Q02445	Q02445	TFPI1_RAT	Tfpi	Tissue factor pathway inhibitor	1	NTCEDPVNEVQK	NTC(UniMod:4)EDPVNEVQK	2	NTC(UniMod:4)EDPVNEVQK2	868603	827027	967427
Q02445	Q02445	TFPI1_RAT	Tfpi	Tissue factor pathway inhibitor	1	NTCEDPVNEVQK	NTC(UniMod:4)EDPVNEVQK	3	NTC(UniMod:4)EDPVNEVQK3	7066.22	8822.05	7203.04
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	NTCQLYIQTDHLFFK	NTC(UniMod:4)QLYIQTDHLFFK	2	NTC(UniMod:4)QLYIQTDHLFFK2	1287.97	2510.51	3945.25
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	NTCQLYIQTDHLFFK	NTC(UniMod:4)QLYIQTDHLFFK	3	NTC(UniMod:4)QLYIQTDHLFFK3	125208	130076	141499
Q4JEI2	Q4JEI2	DFAL1_RAT	Defal1	Defensin alpha-like protein 1	1	NTCSCIR	NTC(UniMod:4)SC(UniMod:4)IR	2	NTC(UniMod:4)SC(UniMod:4)IR2	44204.6		
P61980	P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	NTDEMVELR	NTDEMVELR	2	NTDEMVELR2	120584	111166	113741
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	NTDFFIGKPTLR	NTDFFIGKPTLR	2	NTDFFIGKPTLR2	6933.52	5583.33	6478.61
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	NTDFFIGKPTLR	NTDFFIGKPTLR	3	NTDFFIGKPTLR3	27623.3	45215.3	41968.4
Q920A6	Q920A6	RISC_RAT	Scpep1	Retinoid-inducible serine carboxypeptidase	1	NTDGVNFYNILTK	NTDGVNFYNILTK	2	NTDGVNFYNILTK2	23600.4	17921.4	19497.7
Q53B90	Q53B90	RAB43_RAT	Rab43	Ras-related protein Rab-43	1	NTDHIQLDSK	NTDHIQLDSK	3	NTDHIQLDSK3	3407.45	5301.8	2518.86
Q6V0K7	Q6V0K7	OIT3_RAT	Oit3	Oncoprotein-induced transcript 3 protein	1	NTDHQFDESQSQPLCDNHMDGEWYR	NTDHQFDESQSQPLC(UniMod:4)DNHMDGEWYR	4	NTDHQFDESQSQPLC(UniMod:4)DNHMDGEWYR4	47799.9	74700.7	71107.9
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	NTDKDIFGDACDNCR	NTDKDIFGDAC(UniMod:4)DNC(UniMod:4)R	2	NTDKDIFGDAC(UniMod:4)DNC(UniMod:4)R2	376387	277551	242287
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	NTDKDIFGDACDNCR	NTDKDIFGDAC(UniMod:4)DNC(UniMod:4)R	3	NTDKDIFGDAC(UniMod:4)DNC(UniMod:4)R3	728791	837314	777501
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	NTDPGYNCLPCPPR	NTDPGYNC(UniMod:4)LPC(UniMod:4)PPR	2	NTDPGYNC(UniMod:4)LPC(UniMod:4)PPR2	2.1237e+07	2.30506e+07	2.38774e+07
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	NTDPGYNCLPCPPR	NTDPGYNC(UniMod:4)LPC(UniMod:4)PPR	3	NTDPGYNC(UniMod:4)LPC(UniMod:4)PPR3	4.80652e+06	5.48591e+06	5.81749e+06
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	NTDPGYNCLPCPPRFTGSQPFGR	NTDPGYNC(UniMod:4)LPC(UniMod:4)PPRFTGSQPFGR	3	NTDPGYNC(UniMod:4)LPC(UniMod:4)PPRFTGSQPFGR3	5758.18	25209.9	12965.7
Q62812	Q63862;Q62812	MYH9_RAT	Myh9	Myosin-9	0	NTDQASMPDNTAAQK	NTDQASMPDNTAAQK	2	NTDQASMPDNTAAQK2	12042.1	27804.2	16268.4
Q62812	Q63862;Q62812	MYH9_RAT	Myh9	Myosin-9	0	NTDQASMPDNTAAQK	NTDQASMPDNTAAQK	3	NTDQASMPDNTAAQK3	1.80248e+06	2.1636e+06	2.09461e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	NTDQASMPDNTAAQKVSHLLGINVTDFTR	NTDQASMPDNTAAQKVSHLLGINVTDFTR	4	NTDQASMPDNTAAQKVSHLLGINVTDFTR4	6627.14	3115.66	10483.7
F1LNF0	F1LNF0	F1LNF0_RAT	Myh14	Myosin heavy chain 14	1	NTDQATMPDNTAAQK	NTDQATMPDNTAAQK	2	NTDQATMPDNTAAQK2	1025.69		
Q08851	Q08851	STX5_RAT	Stx5	Syntaxin-5	1	NTDQGVYLGLSK	NTDQGVYLGLSK	2	NTDQGVYLGLSK2	6958		1934.46
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	NTDYFSQLK	NTDYFSQLK	2	NTDYFSQLK2	28030.2	27959.7	28121.9
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	NTEAIGNEVTR	NTEAIGNEVTR	2	NTEAIGNEVTR2	41721.9	37680.9	31705.8
Q63228	Q63228	GMFB_RAT	Gmfb	Glia maturation factor beta	1	NTEDLTEEWLR	NTEDLTEEWLR	2	NTEDLTEEWLR2	27056.7	21410.9	17150.6
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	NTEEEKP	NTEEEKP	1	NTEEEKP1			2375.65
D3ZJD8	D3ZJD8	D3ZJD8_RAT	Clec1b	C-type lectin domain family 1 member B	1	NTEENMNCAYLHNGK	NTEENMNC(UniMod:4)AYLHNGK	2	NTEENMNC(UniMod:4)AYLHNGK2	15561.3	19353.5	13581.4
D3ZJD8	D3ZJD8	D3ZJD8_RAT	Clec1b	C-type lectin domain family 1 member B	1	NTEENMNCAYLHNGK	NTEENMNC(UniMod:4)AYLHNGK	3	NTEENMNC(UniMod:4)AYLHNGK3	223111	193548	198300
F7EUD8	F7EUD8	F7EUD8_RAT	Trpc6	Transient receptor ion channel domain-containing protein	1	NTEEVEAILNGDAETR	NTEEVEAILNGDAETR	2	NTEEVEAILNGDAETR2	7420.06	3100.27	5069.86
F7EUD8	F7EUD8	F7EUD8_RAT	Trpc6	Transient receptor ion channel domain-containing protein	1	NTEEVEAILNGDAETR	NTEEVEAILNGDAETR	3	NTEEVEAILNGDAETR3	5005.32		4227.64
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	NTEFYHIPTHSDASK	NTEFYHIPTHSDASK	2	NTEFYHIPTHSDASK2	6063.72	6473.62	3029.08
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	NTEFYHIPTHSDASK	NTEFYHIPTHSDASK	3	NTEFYHIPTHSDASK3	32325.8	33713.8	30943.6
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	NTEFYHIPTHSDASK	NTEFYHIPTHSDASK	4	NTEFYHIPTHSDASK4	22714.5	23337.5	28944.3
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	NTEGSFQCLCNQGYR	NTEGSFQC(UniMod:4)LC(UniMod:4)NQGYR	2	NTEGSFQC(UniMod:4)LC(UniMod:4)NQGYR2	4116.71	6400.43	7595.69
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	NTEHDPPYWR	NTEHDPPYWR	3	NTEHDPPYWR3	16553.2	27687	21103.9
Q66HA4	Q66HA4	TAXB1_RAT	Tax1bp1	Tax1-binding protein 1 homolog	1	NTEIENTK	NTEIENTK	2	NTEIENTK2	6786.21		3990.78
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	NTEILAALK	NTEILAALK	2	NTEILAALK2	16135.3	21024.6	10860.8
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	NTEISVHPSTR	NTEISVHPSTR	2	NTEISVHPSTR2	47054.2	48110.2	46800.4
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	NTEISVHPSTR	NTEISVHPSTR	3	NTEISVHPSTR3	500503	461455	557895
Q5HZY0	Q5HZY0	UBXN4_RAT	Ubxn4	UBX domain-containing protein 4	1	NTELCETPTTSDPK	NTELC(UniMod:4)ETPTTSDPK	2	NTELC(UniMod:4)ETPTTSDPK2	25876.1	30038	33297.4
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	NTELDPVTTEEQVLDVK	NTELDPVTTEEQVLDVK	2	NTELDPVTTEEQVLDVK2	14176.6	17667.8	20241.2
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	NTELDPVTTEEQVLDVK	NTELDPVTTEEQVLDVK	3	NTELDPVTTEEQVLDVK3			5144.46
P20761	P20761	IGG2B_RAT	Igh-1a	Ig gamma-2B chain C region	1	NTEPVMDSDGSFFMYSK	NTEPVMDSDGSFFMYSK	2	NTEPVMDSDGSFFMYSK2	1.78305e+06	69956.2	1.64271e+06
P20761	P20761	IGG2B_RAT	Igh-1a	Ig gamma-2B chain C region	1	NTEPVMDSDGSFFMYSK	NTEPVMDSDGSFFMYSK	3	NTEPVMDSDGSFFMYSK3	32545.7	29833.1	23644.3
D3ZDZ1	D3ZDZ1	D3ZDZ1_RAT	Apbb1ip	Amyloid beta precursor protein binding family B member 1 interacting protein	1	NTEQDFMSDLMK	NTEQDFMSDLMK	2	NTEQDFMSDLMK2	5616.66	3910.69	
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	NTEQTLQQVQER	NTEQTLQQVQER	2	NTEQTLQQVQER2	6440.6	6880.58	7041.52
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	NTESVGQLWLGLLR	NTESVGQLWLGLLR	2	NTESVGQLWLGLLR2	6464.75	6964.83	6823.66
A0A8I6A2B3	A0A8I6A2B3	A0A8I6A2B3_RAT	Guk1	guanylate kinase	1	NTETEESLAK	NTETEESLAK	2	NTETEESLAK2	14951.1	14500.6	11969
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	NTETGVHMSQTEADLALRPSPSLTSMGPTR	NTETGVHMSQTEADLALRPSPSLTSMGPTR	4	NTETGVHMSQTEADLALRPSPSLTSMGPTR4	4077.51		
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	NTEVGNEVPGQK	NTEVGNEVPGQK	2	NTEVGNEVPGQK2	529005	540164	554367
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	NTFAEVTGLSPGVTYLFK	NTFAEVTGLSPGVTYLFK	2	NTFAEVTGLSPGVTYLFK2	2.17107e+07	2.55888e+07	2.58722e+07
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	NTFAEVTGLSPGVTYLFK	NTFAEVTGLSPGVTYLFK	3	NTFAEVTGLSPGVTYLFK3	1.31044e+07	1.31385e+07	1.09488e+07
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	NTFAEVTGLSPGVTYLFK	NTFAEVTGLSPGVTYLFK	4	NTFAEVTGLSPGVTYLFK4	3902.63	8042.04	974.755
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	NTFAEVTGLSPGVTYLFKVFAVHQGR	NTFAEVTGLSPGVTYLFKVFAVHQGR	3	NTFAEVTGLSPGVTYLFKVFAVHQGR3		7333.38	8764.6
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	NTFAEVTGLSPGVTYLFKVFAVHQGR	NTFAEVTGLSPGVTYLFKVFAVHQGR	4	NTFAEVTGLSPGVTYLFKVFAVHQGR4	53638	29820	25105.6
Q6AYG5	Q6AYG5	ECHD1_RAT	Echdc1	Ethylmalonyl-CoA decarboxylase	1	NTFCSGSDLNAVK	NTFC(UniMod:4)SGSDLNAVK	2	NTFC(UniMod:4)SGSDLNAVK2	13402	11219.3	5959.19
B2RZ68	B2RZ68	B2RZ68_RAT	Dcaf7	DDB1 and CUL4 associated factor 7	1	NTFDHPYPTTK	NTFDHPYPTTK	3	NTFDHPYPTTK3	15175.5	13282.8	19757.6
O08775	O08775	VGFR2_RAT	Kdr	Vascular endothelial growth factor receptor 2	1	NTFENLTWYK	NTFENLTWYK	2	NTFENLTWYK2	11561.8	11316.2	12046.3
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	NTFEVIPVTSSGSPVGDVPFIR	NTFEVIPVTSSGSPVGDVPFIR	3	NTFEVIPVTSSGSPVGDVPFIR3		4699.16	
Q62720	Q62720	ZNT1_RAT	Slc30a1	Proton-coupled zinc antiporter SLC30A1	1	NTFGWIR	NTFGWIR	2	NTFGWIR2	22585.4	19879.8	13594.5
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	NTFLGEAEVHMDSWK	NTFLGEAEVHMDSWK	2	NTFLGEAEVHMDSWK2	45613	38924.4	34357.7
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	NTFLGEAEVHMDSWK	NTFLGEAEVHMDSWK	3	NTFLGEAEVHMDSWK3	108195	93329.9	90596.5
Q5PPM8	Q5PPM8	PP4P1_RAT	Pip4p1	Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase	1	NTFLWTEFTDR	NTFLWTEFTDR	2	NTFLWTEFTDR2	9978.66	15588.5	6896.44
D4A769	D4A769	D4A769_RAT	Samd4b	Sterile alpha motif domain containing 4B	1	NTFQEDGSGMK	NTFQEDGSGMK	2	NTFQEDGSGMK2	4327.6		4861.52
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	NTFQGIYSDQK	NTFQGIYSDQK	2	NTFQGIYSDQK2	40561.6	45261.2	40137.7
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	NTFQLLHEILVMEDPIQVER	NTFQLLHEILVMEDPIQVER	3	NTFQLLHEILVMEDPIQVER3	9279.44	11761.2	7667.14
B0LT89	Q6V9V9;B0LT89	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	0	NTFVGTPFWMAPEVIK	NTFVGTPFWMAPEVIK	2	NTFVGTPFWMAPEVIK2	58647.3	84721.6	30976.4
B0LT89	Q6V9V9;B0LT89	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	0	NTFVGTPFWMAPEVIK	NTFVGTPFWMAPEVIK	3	NTFVGTPFWMAPEVIK3	2260.74	3039.06	
A0A8I6GBQ0	A0A8I6GBQ0	A0A8I6GBQ0_RAT	Stk26	Protein kinase domain-containing protein	1	NTFVGTPFWMAPEVIQQSAYDSK	NTFVGTPFWMAPEVIQQSAYDSK	3	NTFVGTPFWMAPEVIQQSAYDSK3	7449	8815.43	7415.85
F1LXA0	A0A8I6A2J9;F1LXA0	F1LXA0_RAT	Ndufa12	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	0	NTFWDVDGSMVPPEWHR	NTFWDVDGSMVPPEWHR	3	NTFWDVDGSMVPPEWHR3	42918.8	35792.5	39688.9
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	NTGASSGATSEESTEAEFCR	NTGASSGATSEESTEAEFC(UniMod:4)R	3	NTGASSGATSEESTEAEFC(UniMod:4)R3	23655.5	17601.4	26476.5
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	NTGESASQLLDAETAER	NTGESASQLLDAETAER	2	NTGESASQLLDAETAER2	1920.37	5107.16	
A0A0G2K1E1	A0A0G2K1E1	A0A0G2K1E1_RAT	RT1-A1	RT1 class Ia, locus A1	1	NTGGTGGDYAPAPA	NTGGTGGDYAPAPA	2	NTGGTGGDYAPAPA2	5397.73		3682.78
Q8VIF7	Q8VIF7	SBP1_RAT	Selenbp1	Methanethiol oxidase	1	NTGIEAPDYLATVDVDPK	NTGIEAPDYLATVDVDPK	2	NTGIEAPDYLATVDVDPK2	4064.44	5945.97	1474.48
P11980	A0A8I6AKN1;M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	NTGIICTIGPASR	NTGIIC(UniMod:4)TIGPASR	2	NTGIIC(UniMod:4)TIGPASR2	243660	199351	243322
A0A0G2K6T9	A0A0G2K6T9	A0A0G2K6T9_RAT	Pcdh1	Protocadherin 1	1	NTGLITVQGPVDR	NTGLITVQGPVDR	2	NTGLITVQGPVDR2	4328.78	3216.51	5082.43
A0A0G2K6T9	A0A0G2K6T9	A0A0G2K6T9_RAT	Pcdh1	Protocadherin 1	1	NTGLITVQGPVDREDLSTLR	NTGLITVQGPVDREDLSTLR	3	NTGLITVQGPVDREDLSTLR3	57167	62855	56673.5
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	NTGNFRPPVAK	NTGNFRPPVAK	3	NTGNFRPPVAK3	15265.3	11730.6	6670.72
Q5U2R4	Q5U2R4	TM10C_RAT	Trmt10c	tRNA methyltransferase 10 homolog C	1	NTGNWEEALK	NTGNWEEALK	2	NTGNWEEALK2		6945.95	
Q3B7D2	Q3B7D2	SPTC2_RAT	Sptlc2	Serine palmitoyltransferase 2	1	NTGSCQEAAAEVLK	NTGSC(UniMod:4)QEAAAEVLK	2	NTGSC(UniMod:4)QEAAAEVLK2	2306.61	1639.62	2625.7
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	NTGTEETNQDEN	NTGTEETNQDEN	2	NTGTEETNQDEN2			2584.82
Q9QWG5	Q9QWG5	INP4B_RAT	Inpp4b	Type II inositol 3,4-bisphosphate 4-phosphatase	1	NTGYQFIYYSPENTAK	NTGYQFIYYSPENTAK	2	NTGYQFIYYSPENTAK2	3449.11	2667.84	
Q9QWG5	Q9QWG5	INP4B_RAT	Inpp4b	Type II inositol 3,4-bisphosphate 4-phosphatase	1	NTGYQFIYYSPENTAK	NTGYQFIYYSPENTAK	3	NTGYQFIYYSPENTAK3			3755.65
P27008	P27008	PARP1_RAT	Parp1	Poly [ADP-ribose] polymerase 1	1	NTHATTHNAYDLEVIDIFK	NTHATTHNAYDLEVIDIFK	3	NTHATTHNAYDLEVIDIFK3	3724.62		
P27008	P27008	PARP1_RAT	Parp1	Poly [ADP-ribose] polymerase 1	1	NTHATTHNAYDLEVIDIFK	NTHATTHNAYDLEVIDIFK	4	NTHATTHNAYDLEVIDIFK4	19664.8		345.307
P43244	A0A8I6GHY8;P43244;A0A8I5ZWP0	MATR3_RAT	Matr3	Matrin-3	0	NTHCSSLPHYQK	NTHC(UniMod:4)SSLPHYQK	3	NTHC(UniMod:4)SSLPHYQK3	10180.5	3424.9	
Q9ESC1	Q9ESC1	AGRL4_RAT	Adgrl4	Adhesion G protein-coupled receptor L4	1	NTHEMWDQLPTNR	NTHEMWDQLPTNR	2	NTHEMWDQLPTNR2	14917.2	4869.5	14734.1
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	NTHGSALR	NTHGSALR	2	NTHGSALR2			5183.91
Q09073	A0A8I5Y643;Q09073	ADT2_RAT	Slc25a5	ADP/ATP translocase 2	0	NTHIFISWMIAQSVTAVAGLTSYPFDTVR	NTHIFISWMIAQSVTAVAGLTSYPFDTVR	4	NTHIFISWMIAQSVTAVAGLTSYPFDTVR4		3932.61	3948.31
F1M9P7	F1M9P7	F1M9P7_RAT	Mamdc2	MAM domain containing 2	1	NTHSILPWDHTFR	NTHSILPWDHTFR	4	NTHSILPWDHTFR4		1704.26	
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	NTHTLLLAGVFR	NTHTLLLAGVFR	2	NTHTLLLAGVFR2	21179.2	27377.5	19027.2
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	NTHTLLLAGVFR	NTHTLLLAGVFR	3	NTHTLLLAGVFR3	126909	143025	134153
G3V674	G3V674	G3V674_RAT	Cldnd1	Claudin domain containing 1	1	NTHWYAPPER	NTHWYAPPER	3	NTHWYAPPER3	7973.06	8003.98	10723.7
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	NTIEETGILAER	NTIEETGILAER	2	NTIEETGILAER2	214661	241879	211716
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	NTIFTLGTR	NTIFTLGTR	2	NTIFTLGTR2	24284.5	36735.4	28674
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	NTIGSSPVADFSAIK	NTIGSSPVADFSAIK	2	NTIGSSPVADFSAIK2	121889	134631	139574
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	NTIGSSPVADFSAIK	NTIGSSPVADFSAIK	3	NTIGSSPVADFSAIK3			6526.36
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	NTIIATGGYGR	NTIIATGGYGR	2	NTIIATGGYGR2	57956.4	82769.7	27293.6
G3V6W5	G3V6W5	G3V6W5_RAT	Ifih1	RNA helicase	1	NTILEQFTR	NTILEQFTR	2	NTILEQFTR2	23304.1	20853	22618.4
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	NTILFLR	NTILFLR	2	NTILFLR2	37623.5	34318.3	37118.3
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	NTIMECQVCGFHEQR	NTIMEC(UniMod:4)QVC(UniMod:4)GFHEQR	2	NTIMEC(UniMod:4)QVC(UniMod:4)GFHEQR2	1979.04	5091.66	3988.92
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	NTIMECQVCGFHEQR	NTIMEC(UniMod:4)QVC(UniMod:4)GFHEQR	3	NTIMEC(UniMod:4)QVC(UniMod:4)GFHEQR3	56582.8	70669.7	55885.5
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	NTIQWLENELNR	NTIQWLENELNR	2	NTIQWLENELNR2	52522.4	49038.6	56996.7
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	NTIQWLENELNR	NTIQWLENELNR	3	NTIQWLENELNR3	22550	27820.7	26573.8
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	NTISLLVAGLK	NTISLLVAGLK	2	NTISLLVAGLK2	47260.1	65663.6	49288.1
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	NTISLLVAGLKK	NTISLLVAGLKK	2	NTISLLVAGLKK2	2607.5	2511.79	4164.64
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	NTISLLVAGLKK	NTISLLVAGLKK	3	NTISLLVAGLKK3	16725.1	12728.9	16092.7
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	NTITHVSSPGTVTR	NTITHVSSPGTVTR	2	NTITHVSSPGTVTR2	6469.36	3939.72	7200.05
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	NTITHVSSPGTVTR	NTITHVSSPGTVTR	3	NTITHVSSPGTVTR3	60742.9	51535.9	75179
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	NTIVTSYNR	NTIVTSYNR	2	NTIVTSYNR2	139592	112879	164057
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	NTIYAALQDFAQVTLREPLR	NTIYAALQDFAQVTLREPLR	3	NTIYAALQDFAQVTLREPLR3		6120.12	
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	NTKPLLQSR	NTKPLLQSR	2	NTKPLLQSR2	49527.1	52792.8	56746.4
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	NTKYPIQR	NTKYPIQR	2	NTKYPIQR2	14659.2	13188.5	11361.7
P32089	P32089	TXTP_RAT	Slc25a1	Tricarboxylate transport protein, mitochondrial	1	NTLDCGVQILK	NTLDC(UniMod:4)GVQILK	2	NTLDC(UniMod:4)GVQILK2	88567.9	63377.6	80481.9
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	NTLEWCLPVIDAK	NTLEWC(UniMod:4)LPVIDAK	2	NTLEWC(UniMod:4)LPVIDAK2	64637.7	49948.5	54683.3
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	NTLFGTFHVAHSSSLDDVDHK	NTLFGTFHVAHSSSLDDVDHK	3	NTLFGTFHVAHSSSLDDVDHK3	26486.9	12335.5	21225.3
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	NTLFGTFHVAHSSSLDDVDHK	NTLFGTFHVAHSSSLDDVDHK	4	NTLFGTFHVAHSSSLDDVDHK4	33759.1	33547.8	35872
Q6P7S1	Q6P7S1	ASAH1_RAT	Asah1	Acid ceramidase	1	NTLFLDDR	NTLFLDDR	2	NTLFLDDR2	22273.3	19873.9	12758.9
Q6P7S1	Q6P7S1	ASAH1_RAT	Asah1	Acid ceramidase	1	NTLFLDDRR	NTLFLDDRR	3	NTLFLDDRR3		14117.1	19820.4
O55012	Q05140;O55012	PICAL_RAT	Picalm	Phosphatidylinositol-binding clathrin assembly protein	0	NTLFNLSNFLDK	NTLFNLSNFLDK	2	NTLFNLSNFLDK2	13643.5	18560.8	10571.5
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	NTLGLEDPGGEEISGGELEDTKK	NTLGLEDPGGEEISGGELEDTKK	3	NTLGLEDPGGEEISGGELEDTKK3	26962.1	35858.1	36466.4
P01026	P01026	CO3_RAT	C3	Complement C3	1	NTLIIYLEK	NTLIIYLEK	2	NTLIIYLEK2	844078	727362	718367
D3ZUV2	D3ZUV2	D3ZUV2_RAT	Mib1	RING-type E3 ubiquitin transferase	1	NTLIMGLGTQGAEK	NTLIMGLGTQGAEK	2	NTLIMGLGTQGAEK2		4191.21	3506.38
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	NTLIQFEDFGNHNAFR	NTLIQFEDFGNHNAFR	3	NTLIQFEDFGNHNAFR3	45747	30255.5	33158
A0A8I6ANR6	A0A8I6ANR6	A0A8I6ANR6_RAT	Chuk	IkappaB kinase	1	NTLISASQQLK	NTLISASQQLK	2	NTLISASQQLK2	13480.1	24275.9	15014.2
Q641Y0	Q641Y0	OST48_RAT	Ddost	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit	1	NTLLIAGLQAR	NTLLIAGLQAR	2	NTLLIAGLQAR2	279805	261648	292725
Q641Y0	Q641Y0	OST48_RAT	Ddost	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit	1	NTLLIAGLQAR	NTLLIAGLQAR	3	NTLLIAGLQAR3	3972.55	5155.7	5129.2
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	NTLLNGAAIFFPDR	NTLLNGAAIFFPDR	2	NTLLNGAAIFFPDR2	48249.6	76860.7	45258
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	NTLPNLGLVQMEK	NTLPNLGLVQMEK	2	NTLPNLGLVQMEK2	14021.5	7766.9	12839.3
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	NTLPVLDSDESYFLYSK	NTLPVLDSDESYFLYSK	3	NTLPVLDSDESYFLYSK3	194408	238256	257681
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	NTLQEANDILNNLK	NTLQEANDILNNLK	2	NTLQEANDILNNLK2	23148.4	21404	16089.2
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	NTLQEANDILNNLK	NTLQEANDILNNLK	3	NTLQEANDILNNLK3	36457.3	45948	63210.7
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	NTLQEANDILNNLKDFDR	NTLQEANDILNNLKDFDR	3	NTLQEANDILNNLKDFDR3	59042.6	45491	48403.4
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	NTLQEANDILNNLKDFDRR	NTLQEANDILNNLKDFDRR	3	NTLQEANDILNNLKDFDRR3	19258.7	20769.9	21008.7
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	NTLQEANDILNNLKDFDRR	NTLQEANDILNNLKDFDRR	4	NTLQEANDILNNLKDFDRR4	31891.6	37714	61704
Q6AYC2	Q6AYC2	IRGM_RAT	Irgm	Immunity-related GTPase family M protein	1	NTLQTDLSNIR	NTLQTDLSNIR	2	NTLQTDLSNIR2	27764.1	17154	24140
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	NTLSEETR	NTLSEETR	2	NTLSEETR2	49736.6	38377.5	58460.9
A0A8I6A6C3	A0A8I6A938;A0A8I6A6C3	A0A8I6A6C3_RAT	ENSRNOG00000067603	Ig-like domain-containing protein	0	NTLYLEMNSLR	NTLYLEMNSLR	2	NTLYLEMNSLR2	384997	322406	299043
A0A8I6GL55	A0A8I6GL55	A0A8I6GL55_RAT	ENSRNOG00000065406	Ig-like domain-containing protein	1	NTLYLQLNSLK	NTLYLQLNSLK	2	NTLYLQLNSLK2	56999.1	40309.7	55382.1
M0R7Q2	M0R7Q2	M0R7Q2_RAT	ENSRNOG00000065283	Ig-like domain-containing protein	1	NTLYLQMSSVR	NTLYLQMSSVR	2	NTLYLQMSSVR2	76218.5	65967.3	59404.5
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	NTMAYIGFVEEK	NTMAYIGFVEEK	2	NTMAYIGFVEEK2	48157.2	46941.5	48347.6
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	NTMEPLNIPDVTK	NTMEPLNIPDVTK	2	NTMEPLNIPDVTK2	670324	624800	659639
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	NTMEPLNIPDVTK	NTMEPLNIPDVTK	3	NTMEPLNIPDVTK3	6948.4	9776.85	9355.93
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	NTMFGHTNSVTHCR	NTMFGHTNSVTHC(UniMod:4)R	3	NTMFGHTNSVTHC(UniMod:4)R3	3928.97	4837.59	4409.07
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	NTMFGHTNSVTHCR	NTMFGHTNSVTHC(UniMod:4)R	4	NTMFGHTNSVTHC(UniMod:4)R4	4669.45	4270.24	
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	NTNAGAPPGTAYQSPLSLSR	NTNAGAPPGTAYQSPLSLSR	3	NTNAGAPPGTAYQSPLSLSR3	35928	33296.5	40144.5
P50399	P50398;P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	0	NTNDANSCQIIIPQNQVNR	NTNDANSC(UniMod:4)QIIIPQNQVNR	3	NTNDANSC(UniMod:4)QIIIPQNQVNR3	100118	77549.6	81814.2
P50399	P50398;P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	0	NTNDANSCQIIIPQNQVNRK	NTNDANSC(UniMod:4)QIIIPQNQVNRK	3	NTNDANSC(UniMod:4)QIIIPQNQVNRK3	7570.98	10573.4	14115.3
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	NTNIAQK	NTNIAQK	2	NTNIAQK2			2720.44
Q9JLT0	Q9JLT0	MYH10_RAT	Myh10	Myosin-10	1	NTNPNFVR	NTNPNFVR	1	NTNPNFVR1	8668.91	10736.5	7183.04
Q9JLT0	Q9JLT0	MYH10_RAT	Myh10	Myosin-10	1	NTNPNFVR	NTNPNFVR	2	NTNPNFVR2	1.7862e+07	2.07599e+07	1.96711e+07
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	NTNSPEFEQVFK	NTNSPEFEQVFK	2	NTNSPEFEQVFK2	45320.9	46095.7	38268.2
Q6AYF8	Q6AYF8	Q6AYF8_RAT	Serpinb9	Serpin family B member 9	1	NTNVEVFLPK	NTNVEVFLPK	2	NTNVEVFLPK2	35159.1	17920.6	28483.3
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	NTPAASTAQPK	NTPAASTAQPK	2	NTPAASTAQPK2	6092.7		44137.3
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	NTPAAVGSK	NTPAAVGSK	1	NTPAAVGSK1			4384.26
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	NTPAAVGSK	NTPAAVGSK	2	NTPAAVGSK2			76953.4
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	NTPAFFAER	NTPAFFAER	2	NTPAFFAER2	160631	127062	122208
Q4FZX7	Q4FZX7	SRPRB_RAT	Srprb	Signal recognition particle receptor subunit beta	1	NTPAFLVACNK	NTPAFLVAC(UniMod:4)NK	2	NTPAFLVAC(UniMod:4)NK2	73319.6	69389.9	68672.9
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	NTPASGQPQEDLVEQK	NTPASGQPQEDLVEQK	2	NTPASGQPQEDLVEQK2	337392	262705	318176
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	NTPASGQPQEDLVEQK	NTPASGQPQEDLVEQK	3	NTPASGQPQEDLVEQK3	65801.7	56986.2	71640.7
B2RYK9	B2RYK9	B2RYK9_RAT	Dmkn	Dermokine	1	NTPFFNWK	NTPFFNWK	2	NTPFFNWK2	39832.9	39218.8	43276.4
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	NTPHSSGLVSQPHGTPSAILFLGK	NTPHSSGLVSQPHGTPSAILFLGK	4	NTPHSSGLVSQPHGTPSAILFLGK4	8487.96	6440.08	4052.22
D4A731	D4A731	D4A731_RAT	Ankib1	RBR-type E3 ubiquitin transferase	1	NTPLHYAAASGMK	NTPLHYAAASGMK	3	NTPLHYAAASGMK3	16754.4	11209.3	17901.8
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	NTPLLFLK	NTPLLFLK	1	NTPLLFLK1		3912.97	
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	NTPLLFLK	NTPLLFLK	2	NTPLLFLK2	59169.3	69414.5	58681.6
P20760	P20759;P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	0	NTPPTMDTDGSYFLYSK	NTPPTMDTDGSYFLYSK	2	NTPPTMDTDGSYFLYSK2	4.28263e+06	4.12179e+06	4.15653e+06
P20760	P20759;P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	0	NTPPTMDTDGSYFLYSK	NTPPTMDTDGSYFLYSK	3	NTPPTMDTDGSYFLYSK3	52781.1	59008.6	51818.5
P13221	P13221	AATC_RAT	Got1	Aspartate aminotransferase, cytoplasmic	1	NTPVYVSSPTWENHNGVFSAAGFK	NTPVYVSSPTWENHNGVFSAAGFK	3	NTPVYVSSPTWENHNGVFSAAGFK3		3438.89	7146.16
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	NTPWPEAEAIAPQVGNDAVFLILYK	NTPWPEAEAIAPQVGNDAVFLILYK	3	NTPWPEAEAIAPQVGNDAVFLILYK3	6762.24	4750.79	3090.94
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	NTQAALHQR	NTQAALHQR	2	NTQAALHQR2			15512.5
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	NTQEAINGR	NTQEAINGR	2	NTQEAINGR2	677497	746215	698685
Q68G12	Q68G12	SIAT9_RAT	St3gal5	Lactosylceramide alpha-2,3-sialyltransferase	1	NTQEVFQK	NTQEVFQK	2	NTQEVFQK2	6035.96	4485.99	5916.56
Q9ESC1	Q9ESC1	AGRL4_RAT	Adgrl4	Adhesion G protein-coupled receptor L4	1	NTQFDMNSTDLALK	NTQFDMNSTDLALK	2	NTQFDMNSTDLALK2	2512.98		2610.65
P47967	P47967;P97840	LEG5_RAT	Lgals5	Galectin-5	0	NTQINNSWGPEER	NTQINNSWGPEER	2	NTQINNSWGPEER2	4917.07	5744.02	8018.16
D3Z9L0	D3Z9L0	D3Z9L0_RAT	Agk	Acylglycerol kinase, mitochondrial	1	NTQLDLTSK	NTQLDLTSK	2	NTQLDLTSK2	11633.8	10894.4	10110.7
P14046	Q6IE52;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	NTQNLIQMPYGCGEQNMVLFAPNIYVLK	NTQNLIQMPYGC(UniMod:4)GEQNMVLFAPNIYVLK	4	NTQNLIQMPYGC(UniMod:4)GEQNMVLFAPNIYVLK4	88658.3	70069.9	48640.4
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	NTQPVAK	NTQPVAK	1	NTQPVAK1			6688.21
D4A415	D4A415	D4A415_RAT	Abraxas2	Abraxas 2, BRISC complex subunit	1	NTQQQMSYR	NTQQQMSYR	2	NTQQQMSYR2	33873.7	32230.5	36439.5
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	NTQVANGFR	NTQVANGFR	2	NTQVANGFR2	8963.61	15680.8	12246.5
D4A164	D4A164	D4A164_RAT	Nebl	Nebulette	1	NTQVVSDAAYK	NTQVVSDAAYK	2	NTQVVSDAAYK2	26643.5	23876.5	19969.1
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	NTQWVHGIVVYTGHDTK	NTQWVHGIVVYTGHDTK	2	NTQWVHGIVVYTGHDTK2	2586.56	1058.72	
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	NTQWVHGIVVYTGHDTK	NTQWVHGIVVYTGHDTK	3	NTQWVHGIVVYTGHDTK3	25438	23879.9	22288.7
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	NTQWVHGIVVYTGHDTK	NTQWVHGIVVYTGHDTK	4	NTQWVHGIVVYTGHDTK4	30853.6	27095.9	28120.1
A0A8I6ANL9	A0A8I6ANL9	A0A8I6ANL9_RAT	Cdc23	Cell division cycle 23	1	NTSAAIQAYR	NTSAAIQAYR	2	NTSAAIQAYR2	22004.3	15941.9	16952.9
Q9WUD2	Q9WUD2	TRPV2_RAT	Trpv2	Transient receptor potential cation channel subfamily V member 2	1	NTSAPSQQEPDRFDR	NTSAPSQQEPDRFDR	3	NTSAPSQQEPDRFDR3	93420.8	88729.5	92005.9
A0A0G2K1G4	A0A0G2K1G4	A0A0G2K1G4_RAT	Rspry1	Ring finger and SPRY domain containing 1	1	NTSAVLGCLAEK	NTSAVLGC(UniMod:4)LAEK	2	NTSAVLGC(UniMod:4)LAEK2	9372.81	12898.1	9527.85
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	NTSDFVYLK	NTSDFVYLK	2	NTSDFVYLK2	13266.2	11752.3	19392.8
P70615	P70615	LMNB1_RAT	Lmnb1	Lamin-B1	1	NTSEQDQPMGGWEMIR	NTSEQDQPMGGWEMIR	2	NTSEQDQPMGGWEMIR2	6016.7	10315.5	8198.53
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	NTSGILGFSVTVGTQATK	NTSGILGFSVTVGTQATK	2	NTSGILGFSVTVGTQATK2	2148.9	6538.52	3698.42
Q62921	Q62921	HOIL1_RAT	Rbck1	RanBP-type and C3HC4-type zinc finger-containing protein 1	1	NTSLNPQELQR	NTSLNPQELQR	2	NTSLNPQELQR2	4157.27	11050.9	10375.7
Q7TNI4	Q7TNI4	I22R2_RAT	Il22ra2	Interleukin-22 receptor subunit alpha-2	1	NTSMENYYNLVYR	NTSMENYYNLVYR	2	NTSMENYYNLVYR2	1819.33		
Q641Z9	Q641Z9	Q641Z9_RAT	Sdhc	Succinate dehydrogenase cytochrome b560 subunit, mitochondrial	1	NTSSNRPVSPHLTIYR	NTSSNRPVSPHLTIYR	3	NTSSNRPVSPHLTIYR3	18791.3	24286.9	16813
Q641Z9	Q641Z9	Q641Z9_RAT	Sdhc	Succinate dehydrogenase cytochrome b560 subunit, mitochondrial	1	NTSSNRPVSPHLTIYR	NTSSNRPVSPHLTIYR	4	NTSSNRPVSPHLTIYR4	61662.9	70539.1	67659.8
A0A0G2K0G9	A0A0G2K0G9	A0A0G2K0G9_RAT	Rin3	Ras and Rab interactor 3	1	NTSTEVLEYPIKEEK	NTSTEVLEYPIKEEK	3	NTSTEVLEYPIKEEK3			11065
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	NTSVEILEDRPEENSK	NTSVEILEDRPEENSK	3	NTSVEILEDRPEENSK3		7468.23	9643.78
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	NTTAAEEAR	NTTAAEEAR	2	NTTAAEEAR2			11175.3
A0A8I6AF82	A0A8I6AF82	A0A8I6AF82_RAT	ENSRNOG00000070725	Tubulin alpha chain	1	NTTAIAEAWAR	NTTAIAEAWAR	2	NTTAIAEAWAR2	15979	7850.19	23110.9
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	NTTGVTEEALK	NTTGVTEEALK	2	NTTGVTEEALK2	700899	716960	760750
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	NTTGVTEEALKEFSMMFK	NTTGVTEEALKEFSMMFK	3	NTTGVTEEALKEFSMMFK3	91162	133876	126022
P48721	P48721;P14659;A0A8I6AQL9;P63018;M0RCB1	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	0	NTTIPTK	NTTIPTK	1	NTTIPTK1	42774.9	31698.3	34351.8
P48721	P48721;P14659;A0A8I6AQL9;P63018;M0RCB1	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	0	NTTIPTK	NTTIPTK	2	NTTIPTK2	1.58738e+06	1.21062e+06	1.55394e+06
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	NTTIPTKK	NTTIPTKK	2	NTTIPTKK2	8963.38		8297.61
D4ADT7	D4ADT7	D4ADT7_RAT	Nod1	Nucleotide-binding oligomerization domain containing 1	1	NTTITEICLNGNLIKPEEAK	NTTITEIC(UniMod:4)LNGNLIKPEEAK	3	NTTITEIC(UniMod:4)LNGNLIKPEEAK3	6124.43	7973.98	
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	NTTPTGATPPAGMASTR	NTTPTGATPPAGMASTR	2	NTTPTGATPPAGMASTR2	18569.1	23149.6	27250.6
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	NTTSTPSSFLEV	NTTSTPSSFLEV	2	NTTSTPSSFLEV2	3291.17	2654.71	4645.9
D3ZRC4	D3ZRC4	PLPL8_RAT	Pnpla8	Calcium-independent phospholipase A2-gamma	1	NTTTYTSLK	NTTTYTSLK	2	NTTTYTSLK2	7369.83	7524.33	6595.41
A0A0G2JYX9	A0A0G2JYX9	A0A0G2JYX9_RAT	Irak1	Interleukin-1 receptor-associated kinase 1	1	NTTYAVK	NTTYAVK	2	NTTYAVK2	5274.54		
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	NTVAAIEEALDVDR	NTVAAIEEALDVDR	2	NTVAAIEEALDVDR2	20437.5	16136.3	
P98166	P98166	VLDLR_RAT	Vldlr	Very low-density lipoprotein receptor	1	NTVALDADIAAQK	NTVALDADIAAQK	2	NTVALDADIAAQK2	10528.5	8251.47	7221.27
A0A8I6GEV9	A0A8I6GEV9	A0A8I6GEV9_RAT	Abce1	ATP binding cassette subfamily E member 1	1	NTVANSPQTLLAGMNK	NTVANSPQTLLAGMNK	2	NTVANSPQTLLAGMNK2	8206.16	8095.88	7636.2
A0A8I6ALZ6	A0A8I6ALZ6	A0A8I6ALZ6_RAT	ENSRNOG00000067516	Ig-like domain-containing protein	1	NTVDMQLSSLR	NTVDMQLSSLR	2	NTVDMQLSSLR2	66268.7	46752.3	54801.9
A0A8I6ALZ6	A0A8I6ALZ6	A0A8I6ALZ6_RAT	ENSRNOG00000067516	Ig-like domain-containing protein	1	NTVDMQLSSLR	NTVDMQLSSLR	3	NTVDMQLSSLR3			3701.06
G3V7U3	G3V7U3	G3V7U3_RAT	Wnt2b	Protein Wnt	1	NTVDVHTCK	NTVDVHTC(UniMod:4)K	2	NTVDVHTC(UniMod:4)K2			607.148
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	NTVEFNNGIVVK	NTVEFNNGIVVK	2	NTVEFNNGIVVK2	395145	438992	408747
Q6AXM8	Q6AXM8	PON2_RAT	Pon2	Serum paraoxonase/arylesterase 2	1	NTVEIFK	NTVEIFK	2	NTVEIFK2	37872.4	42289.6	52177.7
B1WBY5	B1WBY5	B1WBY5_RAT	Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	1	NTVGYLQWR	NTVGYLQWR	2	NTVGYLQWR2	19031.6	15701.9	18719.3
F1LQ00	F1LQ00	F1LQ00_RAT	Col5a2	Collagen type V alpha 2 chain	1	NTVGYMDDQTK	NTVGYMDDQTK	2	NTVGYMDDQTK2	18464	19253.9	19991.6
D4ADT5	D4ADT5	D4ADT5_RAT	Rig1	RNA helicase	1	NTVICAPTGCGK	NTVIC(UniMod:4)APTGC(UniMod:4)GK	2	NTVIC(UniMod:4)APTGC(UniMod:4)GK2	6147.67	5839.41	3569.68
Q4FZT0	Q4FZT0	STML2_RAT	Stoml2	Stomatin-like protein 2, mitochondrial	1	NTVILFVPQQEAWVVER	NTVILFVPQQEAWVVER	3	NTVILFVPQQEAWVVER3	7450.03	5456.79	
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	NTVLTTMHAFPYIK	NTVLTTMHAFPYIK	2	NTVLTTMHAFPYIK2	8247.58	4065.14	7749.91
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	NTVLTTMHAFPYIK	NTVLTTMHAFPYIK	3	NTVLTTMHAFPYIK3	76621.8	57542.4	84205
Q9EQX6	Q9EQX6	PDGFC_RAT	Pdgfc	Platelet-derived growth factor C	1	NTVLVWR	NTVLVWR	2	NTVLVWR2	58657.5	60675.9	49815.1
D4A2F0	D4A2F0	D4A2F0_RAT	Gnb1l	G protein subunit beta 1 like	1	NTVMDSVQLDSVGFCK	NTVMDSVQLDSVGFC(UniMod:4)K	2	NTVMDSVQLDSVGFC(UniMod:4)K2	2547.6		
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	NTVMECDACGMQPAR	NTVMEC(UniMod:4)DAC(UniMod:4)GMQPAR	2	NTVMEC(UniMod:4)DAC(UniMod:4)GMQPAR2	184254	186828	177187
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	NTVMECDACGMQPAR	NTVMEC(UniMod:4)DAC(UniMod:4)GMQPAR	3	NTVMEC(UniMod:4)DAC(UniMod:4)GMQPAR3	79917.4	86988.6	94931.7
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	NTVQGFK	NTVQGFK	1	NTVQGFK1	15000.1	19649	14121.5
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	NTVQGFK	NTVQGFK	2	NTVQGFK2	617118	634519	719841
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	NTVTLLEEALDQDR	NTVTLLEEALDQDR	2	NTVTLLEEALDQDR2	33344.4	39872.6	35916
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	NTVTLLEEALDQDR	NTVTLLEEALDQDR	3	NTVTLLEEALDQDR3	15037.5	12927.1	17995.5
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	NTVVPTK	NTVVPTK	1	NTVVPTK1	60233.1	48237.1	45817.8
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	NTVVPTKK	NTVVPTKK	1	NTVVPTKK1	14542.1		
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	NTVVPTKK	NTVVPTKK	2	NTVVPTKK2			116763
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	NTVWNDQK	NTVWNDQK	2	NTVWNDQK2	116492	93507.7	107512
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	NTVWNDQKK	NTVWNDQKK	2	NTVWNDQKK2	9740.96	6531.21	6244.33
G3V8W9	G3V8W9	G3V8W9_RAT	Tstd3	Thiosulfate sulfurtransferase like domain containing 3	1	NTWEILEHGK	NTWEILEHGK	2	NTWEILEHGK2	12385.8	1533.81	8384.64
G3V8W9	G3V8W9	G3V8W9_RAT	Tstd3	Thiosulfate sulfurtransferase like domain containing 3	1	NTWEILEHGK	NTWEILEHGK	3	NTWEILEHGK3	14312.4	11523.6	8529.84
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	NTWSILQTQGALVQGGYGHSSVYDHR	NTWSILQTQGALVQGGYGHSSVYDHR	4	NTWSILQTQGALVQGGYGHSSVYDHR4	5780.13	7728.89	7080.06
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	NTWWQSPSIK	NTWWQSPSIK	2	NTWWQSPSIK2	24627.9	28526.3	32615.5
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	NTYFASIAK	NTYFASIAK	2	NTYFASIAK2	99214.3	87317.5	99042.7
Q63060	Q63060	GLPK_RAT	Gk	Glycerol kinase	1	NTYGTGCFLLCNTGHK	NTYGTGC(UniMod:4)FLLC(UniMod:4)NTGHK	3	NTYGTGC(UniMod:4)FLLC(UniMod:4)NTGHK3	22176.5	16337.4	24555.3
A0A8I6AAM9	A0A8I6AAM9	A0A8I6AAM9_RAT	ENSRNOG00000068499	Ig-like domain-containing protein	1	NTYLNWLLQSPGR	NTYLNWLLQSPGR	2	NTYLNWLLQSPGR2	7827.72	16378.7	7725.49
Q9ES71	Q9ES71	GNPAT_RAT	Gnpat	Dihydroxyacetone phosphate acyltransferase	1	NTYNLVPR	NTYNLVPR	2	NTYNLVPR2	10177.8	16436.2	12163.8
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	NVAAGQPMK	NVAAGQPMK	2	NVAAGQPMK2	18949.2	40067.5	22811.4
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	NVADDYIHTAACLHSLALEEPTVIK	NVADDYIHTAAC(UniMod:4)LHSLALEEPTVIK	3	NVADDYIHTAAC(UniMod:4)LHSLALEEPTVIK3	13842.7	10253.7	4690.04
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	NVADDYIHTAACLHSLALEEPTVIK	NVADDYIHTAAC(UniMod:4)LHSLALEEPTVIK	4	NVADDYIHTAAC(UniMod:4)LHSLALEEPTVIK4	17986.1	10669.4	13674.2
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	NVADDYIHTAACLHSLALEEPTVIKK	NVADDYIHTAAC(UniMod:4)LHSLALEEPTVIKK	4	NVADDYIHTAAC(UniMod:4)LHSLALEEPTVIKK4	2148.67	3094.68	2884.3
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	NVADLGSSR	NVADLGSSR	2	NVADLGSSR2	47069.9	56300.6	34603.3
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	NVADNCPR	NVADNC(UniMod:4)PR	1	NVADNC(UniMod:4)PR1	8161.59		53120.2
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	NVADNCPR	NVADNC(UniMod:4)PR	2	NVADNC(UniMod:4)PR2			71945.9
F7FFW7	F7FFW7	F7FFW7_RAT	Atp6v0d1	ATPase H+ transporting V0 subunit D1	1	NVADYYPEYK	NVADYYPEYK	2	NVADYYPEYK2	62826.7	73865.4	77327.9
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	NVAILIPENWNTKPEYK	NVAILIPENWNTKPEYK	3	NVAILIPENWNTKPEYK3	48054.7	51465.9	44325.8
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	NVAKPQDLQTTGR	NVAKPQDLQTTGR	2	NVAKPQDLQTTGR2	3800.84		2106.85
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	NVAKPQDLQTTGR	NVAKPQDLQTTGR	3	NVAKPQDLQTTGR3	15404.2	30711.8	30304.6
A0A8I5XVT7;A0A8I6AEK2	A0A8I5XVT7;A0A8I6AEK2	A0A8I5XVT7_RAT;A0A8I6AEK2_RAT	Fbxl18;RGD1565987	F-box and leucine-rich repeat protein 18	0	NVALDALQLPK	NVALDALQLPK	2	NVALDALQLPK2	5927.49	6319.36	4926.82
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	NVALGEAIR	NVALGEAIR	2	NVALGEAIR2	12364.7	9422.83	9990.5
B5DEI0	B5DEI0	B5DEI0_RAT	Pcyox1l	Pcyox1l protein	1	NVALLAYNR	NVALLAYNR	2	NVALLAYNR2	48279.8	53481.9	59149.5
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	NVAPDMFR	NVAPDMFR	2	NVAPDMFR2	133659	140412	119458
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	NVAPGIFK	NVAPGIFK	2	NVAPGIFK2	74765.5	81629.4	73061.3
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	NVAQYGLDPATR	NVAQYGLDPATR	2	NVAQYGLDPATR2	14495	22113.1	19151.1
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	NVAQYNANHPDFPMQIEQLER	NVAQYNANHPDFPMQIEQLER	3	NVAQYNANHPDFPMQIEQLER3	31879.3	34232.4	28331.5
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	NVASAGGGIGDGGR	NVASAGGGIGDGGR	2	NVASAGGGIGDGGR2	9972.25	8698.42	12298.6
Q5QE80	Q5QE80	AOXC_RAT	Aox3	Aldehyde oxidase 3	1	NVASLGGHIISR	NVASLGGHIISR	3	NVASLGGHIISR3	5416.74	13059.8	4629.32
P19945	P19945	RLA0_RAT	Rplp0	Large ribosomal subunit protein uL10	1	NVASVCLQIGYPTVASVPHSIINGYK	NVASVC(UniMod:4)LQIGYPTVASVPHSIINGYK	3	NVASVC(UniMod:4)LQIGYPTVASVPHSIINGYK3	56981	27411.6	
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	NVAYDTLPVVVHGNGPTK	NVAYDTLPVVVHGNGPTK	3	NVAYDTLPVVVHGNGPTK3	20598.8	18483.4	32759.2
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	NVAYHNWR	NVAYHNWR	2	NVAYHNWR2	150980	153311	139085
F1M842	F1M842	F1M842_RAT	Tp53bp1	Tumor protein p53 binding protein 1	1	NVCEQGTSTVEQNSGK	NVC(UniMod:4)EQGTSTVEQNSGK	2	NVC(UniMod:4)EQGTSTVEQNSGK2	705.734		1197.89
P36953	P36953	AFAM_RAT	Afm	Afamin	1	NVCGALLK	NVC(UniMod:4)GALLK	2	NVC(UniMod:4)GALLK2	220470	218745	217432
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	NVCTEAGMFAIR	NVC(UniMod:4)TEAGMFAIR	2	NVC(UniMod:4)TEAGMFAIR2	124044	121701	119928
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	NVCTEAGMFAIR	NVC(UniMod:4)TEAGMFAIR	3	NVC(UniMod:4)TEAGMFAIR3	10549.1		10385.5
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	NVCVVHCMDGR	NVC(UniMod:4)VVHC(UniMod:4)MDGR	2	NVC(UniMod:4)VVHC(UniMod:4)MDGR2		6712.71	2305.67
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	NVCVVHCMDGR	NVC(UniMod:4)VVHC(UniMod:4)MDGR	3	NVC(UniMod:4)VVHC(UniMod:4)MDGR3	39145.9	37924.6	43432.6
A0A8I5ZUT2	A0A8I5ZUT2	A0A8I5ZUT2_RAT	Irgq	Immunity-related GTPase Q	1	NVDAVEIPDGRPDSGVPSLR	NVDAVEIPDGRPDSGVPSLR	3	NVDAVEIPDGRPDSGVPSLR3	20767.4	19314.7	20391.5
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	NVDDCSPDPCHHGR	NVDDC(UniMod:4)SPDPC(UniMod:4)HHGR	2	NVDDC(UniMod:4)SPDPC(UniMod:4)HHGR2	15894.3		7141.21
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	NVDDCSPDPCHHGR	NVDDC(UniMod:4)SPDPC(UniMod:4)HHGR	3	NVDDC(UniMod:4)SPDPC(UniMod:4)HHGR3	33570.2		38077.9
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	NVDDCSPDPCHHGR	NVDDC(UniMod:4)SPDPC(UniMod:4)HHGR	4	NVDDC(UniMod:4)SPDPC(UniMod:4)HHGR4	17541.3		
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	NVDFNYATK	NVDFNYATK	2	NVDFNYATK2	18571.2	17660.6	18511
P01026	P01026	CO3_RAT	C3	Complement C3	1	NVDGTAFVIFGVQDEDK	NVDGTAFVIFGVQDEDK	2	NVDGTAFVIFGVQDEDK2	19876.1	15478.3	13916.1
P01026	P01026	CO3_RAT	C3	Complement C3	1	NVDGTAFVIFGVQDEDK	NVDGTAFVIFGVQDEDK	3	NVDGTAFVIFGVQDEDK3	5981.04		2225.68
P01026	P01026	CO3_RAT	C3	Complement C3	1	NVDGTAFVIFGVQDEDKK	NVDGTAFVIFGVQDEDKK	3	NVDGTAFVIFGVQDEDKK3	122212	117151	129608
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	NVDILKDPETVK	NVDILKDPETVK	2	NVDILKDPETVK2	14576	13576	
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	NVDILKDPETVK	NVDILKDPETVK	3	NVDILKDPETVK3	41590.5	29273.4	38292.5
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	NVDLAIQQGK	NVDLAIQQGK	2	NVDLAIQQGK2	30953.2	29211.5	15151.8
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	NVDLDLVSSHR	NVDLDLVSSHR	3	NVDLDLVSSHR3	3311.4	2583.12	3790.68
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	NVDLISETTVELYSLAER	NVDLISETTVELYSLAER	3	NVDLISETTVELYSLAER3	6046.33	7616.03	12957.6
D4AEJ0	D4AEJ0	D4AEJ0_RAT	RGD1560617	Hypothetical gene supported by NM_053561; AF062594	1	NVDLLSDMVQEHDEPILK	NVDLLSDMVQEHDEPILK	3	NVDLLSDMVQEHDEPILK3	928619	933756	986155
D4AEJ0	D4AEJ0	D4AEJ0_RAT	RGD1560617	Hypothetical gene supported by NM_053561; AF062594	1	NVDLLSDMVQEHDEPILK	NVDLLSDMVQEHDEPILK	4	NVDLLSDMVQEHDEPILK4		4134.08	
Q5U2Z3	Q5U2Z3	NP1L4_RAT	Nap1l4	Nucleosome assembly protein 1-like 4	1	NVDMLSELVQEYDEPILK	NVDMLSELVQEYDEPILK	3	NVDMLSELVQEYDEPILK3	18318.1	12252.5	33932.1
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	NVDNFKADVK	NVDNFKADVK	2	NVDNFKADVK2	4788.41	6314.01	5244.08
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	NVDNFKADVK	NVDNFKADVK	3	NVDNFKADVK3	12222.3	9093.23	8212.09
A0A8I6AM38	A0A8I6AM38;D3ZCS4	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	0	NVDSVVK	NVDSVVK	2	NVDSVVK2	76624.4	79366.9	83910.7
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	NVDTNQDR	NVDTNQDR	2	NVDTNQDR2			91450.2
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	NVDTVLMELGVR	NVDTVLMELGVR	2	NVDTVLMELGVR2	18424.4	8586.13	3477.69
B2GUY0	B2GUY0	MA1B1_RAT	Man1b1	Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase	1	NVDVNLFESTIR	NVDVNLFESTIR	2	NVDVNLFESTIR2	13603.6	8612.91	9677.28
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	NVDVVLEDSCTVGEIK	NVDVVLEDSC(UniMod:4)TVGEIK	2	NVDVVLEDSC(UniMod:4)TVGEIK2	8083.36	8458.18	5455.61
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	NVDVYDK	NVDVYDK	2	NVDVYDK2	91023.6	70543.5	82415.6
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	NVECTVSGR	NVEC(UniMod:4)TVSGR	2	NVEC(UniMod:4)TVSGR2	741232	766582	823660
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	NVEDDEVGDEEDK	NVEDDEVGDEEDK	2	NVEDDEVGDEEDK2	1824.14	875.923	2395.73
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	NVEDDEVGDEEDKSK	NVEDDEVGDEEDKSK	3	NVEDDEVGDEEDKSK3	6828.03		
F7F4L4	F7F4L4	F7F4L4_RAT	Dnajb12	DnaJ heat shock protein family (Hsp40) member B12	1	NVEDDYIANLR	NVEDDYIANLR	2	NVEDDYIANLR2	20471.1	7666.67	11653.3
D3ZF12	D3ZF12	D3ZF12_RAT	Spcs3	Signal peptidase complex subunit 3	1	NVEDFTGPR	NVEDFTGPR	2	NVEDFTGPR2	234595	257230	285242
Q5XI55	Q5XI55	NGLY1_RAT	Ngly1	Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase	1	NVEDHYCDACQLSNR	NVEDHYC(UniMod:4)DAC(UniMod:4)QLSNR	3	NVEDHYC(UniMod:4)DAC(UniMod:4)QLSNR3	5462.3	4817.73	4883.25
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	NVEDIELWLYEVEGHLASDDYGK	NVEDIELWLYEVEGHLASDDYGK	3	NVEDIELWLYEVEGHLASDDYGK3	14366.1	18409.6	7824.11
A0A8I6GEV9	A0A8I6GEV9	A0A8I6GEV9_RAT	Abce1	ATP binding cassette subfamily E member 1	1	NVEDLSGGELQR	NVEDLSGGELQR	2	NVEDLSGGELQR2	16987.1	15969	13258.7
P30839	P30839	AL3A2_RAT	Aldh3a2	Aldehyde dehydrogenase family 3 member A2	1	NVEEAINFINDR	NVEEAINFINDR	2	NVEEAINFINDR2	32009.7	38769.3	36480.2
P30839	P30839	AL3A2_RAT	Aldh3a2	Aldehyde dehydrogenase family 3 member A2	1	NVEEAINFINDR	NVEEAINFINDR	3	NVEEAINFINDR3	6730.29	5402.46	
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	NVEELVIVLK	NVEELVIVLK	2	NVEELVIVLK2	120494	127895	90679.8
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	NVEELVIVLKK	NVEELVIVLKK	3	NVEELVIVLKK3	3947.18	9252.25	6170.07
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	NVEENVR	NVEENVR	1	NVEENVR1	66180.4	70787.7	
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	NVEENVREMR	NVEENVREMR	3	NVEENVREMR3	43177.8	41900.6	63225.1
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	NVEETTEYLK	NVEETTEYLK	2	NVEETTEYLK2	139903	204711	159125
P62944	P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	NVEGQDMLYQSLK	NVEGQDMLYQSLK	2	NVEGQDMLYQSLK2	29009.2	24859.6	24866.7
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	NVEIPELTR	NVEIPELTR	2	NVEIPELTR2	33784.5	39787.9	33630.7
P18292	P18292	THRB_RAT	F2	Prothrombin	1	NVEKISMLEK	NVEKISMLEK	2	NVEKISMLEK2	7608.27	5706.38	5534.23
P18292	P18292	THRB_RAT	F2	Prothrombin	1	NVEKISMLEK	NVEKISMLEK	3	NVEKISMLEK3	44918.1	52705.2	43790.2
P18292	P18292	THRB_RAT	F2	Prothrombin	1	NVEKISMLEKIYIHPR	NVEKISMLEKIYIHPR	4	NVEKISMLEKIYIHPR4	338.845	4391.23	3012.28
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	NVENEVSTLK	NVENEVSTLK	2	NVENEVSTLK2	29965.2	22096	27134.8
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	NVENFLDACR	NVENFLDAC(UniMod:4)R	2	NVENFLDAC(UniMod:4)R2	6851.16		
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	NVEPPSPTPAAR	NVEPPSPTPAAR	2	NVEPPSPTPAAR2	85258.2	88951.5	80548.9
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	NVEQDELQQVIR	NVEQDELQQVIR	2	NVEQDELQQVIR2	7160.92	5307.13	10941.3
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	NVEQDELQQVIR	NVEQDELQQVIR	3	NVEQDELQQVIR3	2117.17	3155.89	3564.12
A0A8I5ZM67	A0A8I5ZM67	A0A8I5ZM67_RAT	Borcs7	BLOC-1-related complex subunit 7	1	NVEQSPDLQDQLSHLLK	NVEQSPDLQDQLSHLLK	3	NVEQSPDLQDQLSHLLK3	8597.6	10600.1	11857.4
A0A8I5Y1D5	A0A8I5Y1D5	A0A8I5Y1D5_RAT	Mtmr1	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	NVERDPHFILDVPLGVISR	NVERDPHFILDVPLGVISR	3	NVERDPHFILDVPLGVISR3	5248.07	5426.33	7670.31
A0A8I5Y1D5	A0A8I5Y1D5	A0A8I5Y1D5_RAT	Mtmr1	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	NVERDPHFILDVPLGVISR	NVERDPHFILDVPLGVISR	4	NVERDPHFILDVPLGVISR4	13762.8	17303.8	13894.9
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	NVESTLR	NVESTLR	2	NVESTLR2	222099	251167	262352
Q01205	Q01205	ODO2_RAT	Dlst	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial	1	NVETMNYADIER	NVETMNYADIER	2	NVETMNYADIER2	149146	147905	150406
Q10473	Q10473	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	1	NVETNQCLDNMAR	NVETNQC(UniMod:4)LDNMAR	2	NVETNQC(UniMod:4)LDNMAR2	49492.8	38630.7	45740.9
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	NVEVIESAK	NVEVIESAK	2	NVEVIESAK2	363317	362730	361147
Q9R0C5	Q9R0C5	GALT7_RAT	Galnt7	N-acetylgalactosaminyltransferase 7	1	NVEWGEIR	NVEWGEIR	2	NVEWGEIR2	15571.7	13590.8	19589.4
Q8CFN2	Q8CFN2	CDC42_RAT	Cdc42	Cell division control protein 42 homolog	1	NVFDEAILAALEPPEPK	NVFDEAILAALEPPEPK	2	NVFDEAILAALEPPEPK2	200748	201290	243664
Q8CFN2	Q8CFN2	CDC42_RAT	Cdc42	Cell division control protein 42 homolog	1	NVFDEAILAALEPPEPK	NVFDEAILAALEPPEPK	3	NVFDEAILAALEPPEPK3	155602	114567	165070
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	NVFDFDSYNNDMR	NVFDFDSYNNDMR	2	NVFDFDSYNNDMR2	7457.21	6243.52	5068.52
B0BNI6	B0BNI6	B0BNI6_RAT	Slc25a35	Solute carrier family 25, member 35	1	NVFHAFFTIGK	NVFHAFFTIGK	3	NVFHAFFTIGK3	2791.22	3016.5	1281.09
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	NVFIAQNVASLQELGGSEK	NVFIAQNVASLQELGGSEK	3	NVFIAQNVASLQELGGSEK3	14896.8	9201.35	9828.15
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	NVFIIGATNRPDIIDPAILR	NVFIIGATNRPDIIDPAILR	3	NVFIIGATNRPDIIDPAILR3	35560	19355	27720.6
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	NVFIIGATNRPDIIDPAILRPGR	NVFIIGATNRPDIIDPAILRPGR	3	NVFIIGATNRPDIIDPAILRPGR3	352575	273063	287214
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	NVFIIGATNRPDIIDPAILRPGR	NVFIIGATNRPDIIDPAILRPGR	4	NVFIIGATNRPDIIDPAILRPGR4	903174	789386	927586
Q704E8	Q704E8	ABCB7_RAT	Abcb7	Iron-sulfur clusters transporter ABCB7, mitochondrial	1	NVFLHLHNLDLGFHLSR	NVFLHLHNLDLGFHLSR	4	NVFLHLHNLDLGFHLSR4		3932.26	2425.76
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	NVFLLGFIPAK	NVFLLGFIPAK	2	NVFLLGFIPAK2	24357.7	31847.1	39415.3
P97700	P97700	M2OM_RAT	Slc25a11	Mitochondrial 2-oxoglutarate/malate carrier protein	1	NVFNALIR	NVFNALIR	2	NVFNALIR2	154464	165488	179197
D3ZYT2	D3ZYT2	D3ZYT2_RAT	Mrps5	Mitochondrial ribosomal protein S5	1	NVFNMTAK	NVFNMTAK	2	NVFNMTAK2	14820.4	5666.96	
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	NVFSPGPLICNLESQR	NVFSPGPLIC(UniMod:4)NLESQR	2	NVFSPGPLIC(UniMod:4)NLESQR2	17646.8	23755.4	19627.9
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	NVFSPGPLICNLESQR	NVFSPGPLIC(UniMod:4)NLESQR	3	NVFSPGPLIC(UniMod:4)NLESQR3	8623.27	7369.95	9706.9
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	NVFSTFR	NVFSTFR	1	NVFSTFR1	4010.89		990.641
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	NVFVADFGLITIK	NVFVADFGLITIK	2	NVFVADFGLITIK2	14517	13591.9	7004.15
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	NVFVEFYAPWCGHCK	NVFVEFYAPWC(UniMod:4)GHC(UniMod:4)K	3	NVFVEFYAPWC(UniMod:4)GHC(UniMod:4)K3	14439.9	10062.2	9812.4
A0A8I5ZQW6	A0A8I6G920;A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	0	NVFYDNGK	NVFYDNGK	2	NVFYDNGK2	26430.9	30124.2	19923.7
A0A8I5ZW56	A0A8I5ZW56	A0A8I5ZW56_RAT	Clec16a	C-type lectin domain containing 16A	1	NVGEEEDEERGSAEDAQEDAEK	NVGEEEDEERGSAEDAQEDAEK	3	NVGEEEDEERGSAEDAQEDAEK3	12517.5	21275.8	8918.46
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	NVGHNIYILAHQLAR	NVGHNIYILAHQLAR	3	NVGHNIYILAHQLAR3	38022.8	36090.3	42366.6
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	NVGHNIYILAHQLAR	NVGHNIYILAHQLAR	4	NVGHNIYILAHQLAR4	15985.6	17779.3	17424.3
A0A140UHX9	A0A140UHX9	A0A140UHX9_RAT	Ccz1	CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated	1	NVGLCEAIVQFTR	NVGLC(UniMod:4)EAIVQFTR	2	NVGLC(UniMod:4)EAIVQFTR2		7794.15	3847.82
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	NVGLDIEAEVPAVK	NVGLDIEAEVPAVK	2	NVGLDIEAEVPAVK2	233306	225599	199901
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	NVGLDIEAEVPAVK	NVGLDIEAEVPAVK	3	NVGLDIEAEVPAVK3	7318.65		7743.74
P58366	P58366	ANKH_RAT	Ankh	Progressive ankylosis protein homolog	1	NVGLVFVNSK	NVGLVFVNSK	2	NVGLVFVNSK2	3875.16	5653.98	8155.16
B5DF57	B5DF57	B5DF57_RAT	Epb42	protein-glutamine gamma-glutamyltransferase	1	NVGNSISTK	NVGNSISTK	2	NVGNSISTK2	17105.5	16689.9	25055.7
D4ACA1	D4ACA1	D4ACA1_RAT	Nxpe3	Neurexophilin and PC-esterase domain family, member 3	1	NVGPFLAVDQK	NVGPFLAVDQK	2	NVGPFLAVDQK2		14880.6	
B2RZ79	B2RZ79	B2RZ79_RAT	Iscu	Iron-sulfur cluster assembly enzyme	1	NVGTGLVGAPACGDVMK	NVGTGLVGAPAC(UniMod:4)GDVMK	2	NVGTGLVGAPAC(UniMod:4)GDVMK2	11157.8	10208.3	9480.54
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	NVGVVNSLFK	NVGVVNSLFK	2	NVGVVNSLFK2	25223.5	21424	21419.4
P49744	P35444;P49744	TSP4_RAT	Thbs4	Thrombospondin-4	0	NVGWKDK	NVGWKDK	2	NVGWKDK2	39249.1	43276	47325.8
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	NVHDLLAK	NVHDLLAK	2	NVHDLLAK2	57621.1	57649.6	55948.2
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	NVHGDIHAGLNGWMEQR	NVHGDIHAGLNGWMEQR	3	NVHGDIHAGLNGWMEQR3	6728.03	11892.6	3518.42
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	NVHGDIHAGLNGWMEQR	NVHGDIHAGLNGWMEQR	4	NVHGDIHAGLNGWMEQR4	20903.4	28059.7	21893.6
G3V762	G3V762	G3V762_RAT	Gfus	GDP-L-fucose synthase	1	NVHINDNVLHSAFEVGTR	NVHINDNVLHSAFEVGTR	3	NVHINDNVLHSAFEVGTR3	1909.26	2271.64	
G3V762	G3V762	G3V762_RAT	Gfus	GDP-L-fucose synthase	1	NVHINDNVLHSAFEVGTR	NVHINDNVLHSAFEVGTR	4	NVHINDNVLHSAFEVGTR4	2304.87	1063.21	2153.53
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	NVHLAPGWLMQLEK	NVHLAPGWLMQLEK	2	NVHLAPGWLMQLEK2	20109.9	17451.6	27287.3
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	NVHLAPGWLMQLEK	NVHLAPGWLMQLEK	3	NVHLAPGWLMQLEK3	202969	140810	193530
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	NVHLFATPLEANLEEAEPGAR	NVHLFATPLEANLEEAEPGAR	3	NVHLFATPLEANLEEAEPGAR3	287839	333712	309499
F1M7Z1	F1M7Z1	F1M7Z1_RAT	Edc3	Enhancer of mRNA-decapping protein 3	1	NVHQRPTVALLCGPHVK	NVHQRPTVALLC(UniMod:4)GPHVK	4	NVHQRPTVALLC(UniMod:4)GPHVK4	12578.6	11859.4	5195.65
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	NVHSSVPLLNSKDPIDR	NVHSSVPLLNSKDPIDR	4	NVHSSVPLLNSKDPIDR4	5139.49	5359.18	
A0A0G2K8N6	A0A0G2K8N6	A0A0G2K8N6_RAT	Ankmy2	Ankyrin repeat and MYND domain containing 2	1	NVHVNCLDENGMTPLMHAAYK	NVHVNC(UniMod:4)LDENGMTPLMHAAYK	3	NVHVNC(UniMod:4)LDENGMTPLMHAAYK3		3163.66	
A0A0G2K8N6	A0A0G2K8N6	A0A0G2K8N6_RAT	Ankmy2	Ankyrin repeat and MYND domain containing 2	1	NVHVNCLDENGMTPLMHAAYK	NVHVNC(UniMod:4)LDENGMTPLMHAAYK	4	NVHVNC(UniMod:4)LDENGMTPLMHAAYK4	40690.3	29338.3	38451.7
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	NVIAALNSR	NVIAALNSR	2	NVIAALNSR2	140591	137041	143533
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	NVIALAFDYR	NVIALAFDYR	2	NVIALAFDYR2	249154	311265	213981
O88923	O88923	AGRL2_RAT	Adgrl2	Adhesion G protein-coupled receptor L2	1	NVIDYIYNTR	NVIDYIYNTR	2	NVIDYIYNTR2	6838.86	6426.75	7444.42
P20650	P20650	PPM1A_RAT	Ppm1a	Protein phosphatase 1A	1	NVIEAVYNR	NVIEAVYNR	2	NVIEAVYNR2	16630.8	12196.6	
P35815	P35815	PPM1B_RAT	Ppm1b	Protein phosphatase 1B	1	NVIEAVYSR	NVIEAVYSR	2	NVIEAVYSR2	51572.4	43234.6	55971.3
Q64542	Q64542	AT2B4_RAT	Atp2b4	Plasma membrane calcium-transporting ATPase 4	1	NVIEPMASEGLR	NVIEPMASEGLR	2	NVIEPMASEGLR2	12767.9	17029	17754
A0A8I6GLY6	A0A8I6GLY6	A0A8I6GLY6_RAT	Gga1	Golgi associated, gamma adaptin ear containing, ARF binding protein 1	1	NVIFEDEEK	NVIFEDEEK	2	NVIFEDEEK2	11152.8	15524.9	7917.7
Q5XFX0	Q5XFX0	TAGL2_RAT	Tagln2	Transgelin-2	1	NVIGLQMGTNR	NVIGLQMGTNR	2	NVIGLQMGTNR2	926631	745179	851082
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	NVIHELFLNTLDPK	NVIHELFLNTLDPK	2	NVIHELFLNTLDPK2	7495.62	6964.22	7334.41
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	NVIHELFLNTLDPK	NVIHELFLNTLDPK	3	NVIHELFLNTLDPK3	18070.6	17475.9	21340.6
G3V816	G3V816	G3V816_RAT	Nme3	Nucleoside diphosphate kinase	1	NVIHGSDSVESAQR	NVIHGSDSVESAQR	3	NVIHGSDSVESAQR3	11024.3	10660.9	13783.6
O88989	O88989	MDHC_RAT	Mdh1	Malate dehydrogenase, cytoplasmic	1	NVIIWGNHSSTQYPDVNHAK	NVIIWGNHSSTQYPDVNHAK	3	NVIIWGNHSSTQYPDVNHAK3	46640.9	21097.4	20576
O88989	O88989	MDHC_RAT	Mdh1	Malate dehydrogenase, cytoplasmic	1	NVIIWGNHSSTQYPDVNHAK	NVIIWGNHSSTQYPDVNHAK	4	NVIIWGNHSSTQYPDVNHAK4	84187	54052.6	54938.4
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	NVILEVNEAVLTESMIQNLIK	NVILEVNEAVLTESMIQNLIK	3	NVILEVNEAVLTESMIQNLIK3	15188.8	2422.03	
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	NVILFSVFDENR	NVILFSVFDENR	2	NVILFSVFDENR2	293508	247560	219789
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	NVILFSVFDENR	NVILFSVFDENR	3	NVILFSVFDENR3	14106.7	17382.8	13675
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	NVILMAHDGK	NVILMAHDGK	2	NVILMAHDGK2	10707.5	16390	
P56522	P56522	ADRO_RAT	Fdxr	NADPH:adrenodoxin oxidoreductase, mitochondrial	1	NVINTFTQTAR	NVINTFTQTAR	2	NVINTFTQTAR2	20365.8	19173	15914.6
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	NVIPHDIGDPDDEPWLR	NVIPHDIGDPDDEPWLR	3	NVIPHDIGDPDDEPWLR3	19325.9	21222.7	9009
D4AE59	D4AE59	STK11_RAT	Stk11	Serine/threonine-protein kinase STK11	1	NVIQLVDVLYNEEK	NVIQLVDVLYNEEK	2	NVIQLVDVLYNEEK2	5770.42	7829.52	4685.49
D4AE59	D4AE59	STK11_RAT	Stk11	Serine/threonine-protein kinase STK11	1	NVIQLVDVLYNEEK	NVIQLVDVLYNEEK	3	NVIQLVDVLYNEEK3	7339.02	5796.21	7725.76
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	NVIQSVLQAIR	NVIQSVLQAIR	2	NVIQSVLQAIR2	123092	213128	127500
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	NVISSSSFK	NVISSSSFK	1	NVISSSSFK1		1400.41	
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	NVISSSSFK	NVISSSSFK	2	NVISSSSFK2	181003	196512	218929
D4A1A5	D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	NVITEPIYPEAVHMFAVNMFR	NVITEPIYPEAVHMFAVNMFR	3	NVITEPIYPEAVHMFAVNMFR3	38204.9	45658.6	44214.9
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	NVIVDCTYLQFLEMHGEMLAVSK	NVIVDC(UniMod:4)TYLQFLEMHGEMLAVSK	3	NVIVDC(UniMod:4)TYLQFLEMHGEMLAVSK3	330314	331468	265309
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	NVIVDCTYLQFLEMHGEMLAVSK	NVIVDC(UniMod:4)TYLQFLEMHGEMLAVSK	4	NVIVDC(UniMod:4)TYLQFLEMHGEMLAVSK4	10734.2	6309.27	8029.09
D3ZYM7	D3ZYM7	D3ZYM7_RAT	Lyrm4	LYR motif containing 4	1	NVKDPVEIQALVNK	NVKDPVEIQALVNK	3	NVKDPVEIQALVNK3	25600.8	16292	7514.35
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	NVKFPDEDEILEK	NVKFPDEDEILEK	2	NVKFPDEDEILEK2	21903.3	19327	14882
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	NVKFPDEDEILEK	NVKFPDEDEILEK	3	NVKFPDEDEILEK3	61246.6	76071	49491.3
A0A8I6AT07	M0R4Q5;A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	0	NVLAAACPYFK	NVLAAAC(UniMod:4)PYFK	2	NVLAAAC(UniMod:4)PYFK2	16570.3	27048.7	22180.5
P56571	P56571	ES1_RAT		ES1 protein homolog, mitochondrial	1	NVLAESAR	NVLAESAR	2	NVLAESAR2	204089	196653	235269
O35824	O35824	DNJA2_RAT	Dnaja2	DnaJ homolog subfamily A member 2	1	NVLCSACSGQGGK	NVLC(UniMod:4)SAC(UniMod:4)SGQGGK	2	NVLC(UniMod:4)SAC(UniMod:4)SGQGGK2	74654.7	77757.4	85034
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	NVLDTSWPTPPPALR	NVLDTSWPTPPPALR	2	NVLDTSWPTPPPALR2	33568.3	52325.4	43569.7
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	NVLDTSWPTPPPALR	NVLDTSWPTPPPALR	3	NVLDTSWPTPPPALR3	49065.7	70214.2	59850.4
A0A8I6A1V1	A0A8I6A1V1	A0A8I6A1V1_RAT	Ptprd	protein-tyrosine-phosphatase	1	NVLELNDVR	NVLELNDVR	2	NVLELNDVR2	2789.53	5281.33	3242.6
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	NVLELSNVMR	NVLELSNVMR	2	NVLELSNVMR2	16535.2	13610.5	14061.7
P09456	P09456;P81377	KAP0_RAT	Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit	0	NVLFSHLDDNER	NVLFSHLDDNER	2	NVLFSHLDDNER2	3511.63	8427.84	2652.05
P09456	P09456;P81377	KAP0_RAT	Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit	0	NVLFSHLDDNER	NVLFSHLDDNER	3	NVLFSHLDDNER3	51374.6	71869.2	48412.9
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	NVLFVIDK	NVLFVIDK	1	NVLFVIDK1	122920	109486	83386.9
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	NVLFVIDK	NVLFVIDK	2	NVLFVIDK2	1.82821e+06	1.855e+06	1.61941e+06
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	NVLGHMQQGGAPSPFDR	NVLGHMQQGGAPSPFDR	2	NVLGHMQQGGAPSPFDR2	11240.3	10144.5	6714.29
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	NVLGHMQQGGAPSPFDR	NVLGHMQQGGAPSPFDR	3	NVLGHMQQGGAPSPFDR3	207797	245560	199270
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	NVLGWQDANSTEFDPK	NVLGWQDANSTEFDPK	2	NVLGWQDANSTEFDPK2	66770	92884.4	87941.6
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	NVLGWQDANSTEFDPK	NVLGWQDANSTEFDPK	3	NVLGWQDANSTEFDPK3	5841.2	12440.1	10202.7
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	NVLHSAR	NVLHSAR	2	NVLHSAR2			77536.3
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	NVLINTQSENER	NVLINTQSENER	2	NVLINTQSENER2	27428	44684.7	30674.5
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	NVLISVLQAIR	NVLISVLQAIR	2	NVLISVLQAIR2	55981.7	70126.1	72062.3
P27605	P27605	HPRT_RAT	Hprt1	Hypoxanthine-guanine phosphoribosyltransferase	1	NVLIVEDIIDTGK	NVLIVEDIIDTGK	2	NVLIVEDIIDTGK2	57846.5	45820.8	53163.9
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	NVLLDNDR	NVLLDNDR	2	NVLLDNDR2	8922.83	16485.6	21668.7
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	NVLLDPQLVPGGGASEMAVAHALTEK	NVLLDPQLVPGGGASEMAVAHALTEK	3	NVLLDPQLVPGGGASEMAVAHALTEK3	43174.1	46294	44713.5
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	NVLLDPQLVPGGGASEMAVAHALTEK	NVLLDPQLVPGGGASEMAVAHALTEK	4	NVLLDPQLVPGGGASEMAVAHALTEK4	6045.72	10521.7	15314.9
O54715	O54715	VAS1_RAT	Atp6ap1	V-type proton ATPase subunit S1	1	NVLLFLQDK	NVLLFLQDK	2	NVLLFLQDK2	40554.4	41053.7	42188.4
Q5PPK9	Q5PPK9	EIPR1_RAT	Eipr1	EARP and GARP complex-interacting protein 1	1	NVLLHQAGEIWHISASPADK	NVLLHQAGEIWHISASPADK	3	NVLLHQAGEIWHISASPADK3			10515.6
Q5PPK9	Q5PPK9	EIPR1_RAT	Eipr1	EARP and GARP complex-interacting protein 1	1	NVLLHQAGEIWHISASPADK	NVLLHQAGEIWHISASPADK	4	NVLLHQAGEIWHISASPADK4	17535	10549.9	18746.9
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	NVLLLGEDGAGK	NVLLLGEDGAGK	2	NVLLLGEDGAGK2	114768	112488	116526
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	NVLLSAGCDNVVLIWNVGTAEELYR	NVLLSAGC(UniMod:4)DNVVLIWNVGTAEELYR	3	NVLLSAGC(UniMod:4)DNVVLIWNVGTAEELYR3	24342.8	32930.3	20208.7
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	NVLLVTQHYAK	NVLLVTQHYAK	2	NVLLVTQHYAK2	23272.2	24518.1	13728.6
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	NVLLVTQHYAK	NVLLVTQHYAK	3	NVLLVTQHYAK3	60885.6	58049.6	98445.3
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	NVLMYGPPGTGK	NVLMYGPPGTGK	2	NVLMYGPPGTGK2	80363	61188.9	82842.1
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	NVLPVLNNLLENR	NVLPVLNNLLENR	2	NVLPVLNNLLENR2	23596.4	21365.5	16726.7
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	NVLSDSKPAGYSR	NVLSDSKPAGYSR	2	NVLSDSKPAGYSR2	150479	105176	111513
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	NVLSDSKPAGYSR	NVLSDSKPAGYSR	3	NVLSDSKPAGYSR3	2.08865e+06	2.16082e+06	2.2856e+06
P97520	P97520	C5AR1_RAT	C5ar1	C5a anaphylatoxin chemotactic receptor 1	1	NVLSEDSLGR	NVLSEDSLGR	2	NVLSEDSLGR2	8228.82	9762.7	3812.53
F1M386	F1M386	RPGF2_RAT	Rapgef2	Rap guanine nucleotide exchange factor 2	1	NVLSGQNLQPPVIPLFPVIK	NVLSGQNLQPPVIPLFPVIK	3	NVLSGQNLQPPVIPLFPVIK3	3869.59	7971.87	9245.14
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	NVLSLTDR	NVLSLTDR	2	NVLSLTDR2	1.11464e+06	1.00081e+06	1.03062e+06
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	NVLSLTDRGEFFNELVGQQR	NVLSLTDRGEFFNELVGQQR	3	NVLSLTDRGEFFNELVGQQR3	173915	192955	197599
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	NVLVEEAR	NVLVEEAR	2	NVLVEEAR2	82608.3	86394	81772.5
A0A8I6AM23	A0A8I6AM23	A0A8I6AM23_RAT	Jak1	Tyrosine-protein kinase	1	NVLVESEHQVK	NVLVESEHQVK	3	NVLVESEHQVK3	5464.39	8154.91	7537.46
A0A8I5Y0Y2	A0A8I5Y0Y2	A0A8I5Y0Y2_RAT	Ddi2	DNA damage inducible 1 homolog 2	1	NVLVIGTTGSQTTFLPEGELPECAR	NVLVIGTTGSQTTFLPEGELPEC(UniMod:4)AR	3	NVLVIGTTGSQTTFLPEGELPEC(UniMod:4)AR3	7220.46	5188.36	7683.54
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	NVLVSEDNVAK	NVLVSEDNVAK	2	NVLVSEDNVAK2	68825.6	55246.7	70816.8
O35346	O35346	FAK1_RAT	Ptk2	Focal adhesion kinase 1	1	NVLVSSNDCVK	NVLVSSNDC(UniMod:4)VK	2	NVLVSSNDC(UniMod:4)VK2	13609.9	11516.6	15358.4
P16975	P16975	SPRC_RAT	Sparc	SPARC	1	NVLVTLYER	NVLVTLYER	2	NVLVTLYER2	177258	174150	153390
P16975	P16975	SPRC_RAT	Sparc	SPARC	1	NVLVTLYERDEGNNLLTEK	NVLVTLYERDEGNNLLTEK	3	NVLVTLYERDEGNNLLTEK3	347089	336027	304000
Q63750	Q63750	RM23_RAT	Mrpl23	Large ribosomal subunit protein uL23m	1	NVLYPLYQLGGPQLR	NVLYPLYQLGGPQLR	2	NVLYPLYQLGGPQLR2	6177.54	4346.28	3144.96
Q63750	Q63750	RM23_RAT	Mrpl23	Large ribosomal subunit protein uL23m	1	NVLYPLYQLGGPQLR	NVLYPLYQLGGPQLR	3	NVLYPLYQLGGPQLR3	3508.86	2630.11	
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	NVMASSPALK	NVMASSPALK	2	NVMASSPALK2	96159.9	93524	105492
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	NVMEEAK	NVMEEAK	1	NVMEEAK1	789.965	3400.4	2755.66
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	NVMEEAK	NVMEEAK	2	NVMEEAK2	309748	277736	252321
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	NVMILTNPVAAK	NVMILTNPVAAK	2	NVMILTNPVAAK2	124738	103182	118550
Q498T9	Q498T9	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	1	NVMIPATIAQLDNLQELSLHQCSVK	NVMIPATIAQLDNLQELSLHQC(UniMod:4)SVK	3	NVMIPATIAQLDNLQELSLHQC(UniMod:4)SVK3	26933.7	19988.3	22030.1
Q6Q0N1	Q6Q0N1	CNDP2_RAT	Cndp2	Cytosolic non-specific dipeptidase	1	NVMLLPVGSADDGAHSQNEK	NVMLLPVGSADDGAHSQNEK	3	NVMLLPVGSADDGAHSQNEK3	33266.7	28787.5	28187.1
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	NVMMIQSCK	NVMMIQSC(UniMod:4)K	2	NVMMIQSC(UniMod:4)K2	80828.8	90130.6	68287.2
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	NVMNDAWR	NVMNDAWR	2	NVMNDAWR2	31112.7	23035.2	26620.8
A0A0G2KB61	A0A0G2KB61	A0A0G2KB61_RAT	Ppp1r13b	Protein phosphatase 1, regulatory subunit 13B	1	NVMNVPGEK	NVMNVPGEK	2	NVMNVPGEK2	6565.62	6350.79	
A0A0G2K9K4	A0A0G2K9K4	A0A0G2K9K4_RAT	Tfg	Trafficking from ER to golgi regulator	1	NVMSAFGLTDDQVSGPPSAPTEDR	NVMSAFGLTDDQVSGPPSAPTEDR	3	NVMSAFGLTDDQVSGPPSAPTEDR3	66025.1	54561.2	56417.3
Q9Z2L0	Q9Z2L0	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	1	NVNAGGHK	NVNAGGHK	2	NVNAGGHK2			10335.7
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	NVNFQKAISEK	NVNFQKAISEK	2	NVNFQKAISEK2	4745.39	6139.33	
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	NVNFQKAISEK	NVNFQKAISEK	3	NVNFQKAISEK3	16831.7	14149.6	7627.57
Q9R1T3	Q9R1T3	CATZ_RAT	Ctsz	Cathepsin Z	1	NVNGVNYASVTR	NVNGVNYASVTR	2	NVNGVNYASVTR2	34694.5	35311.2	50733.6
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	NVNIQNFHISWK	NVNIQNFHISWK	2	NVNIQNFHISWK2	483957	547801	363538
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	NVNIQNFHISWK	NVNIQNFHISWK	3	NVNIQNFHISWK3	1.60415e+06	1.82381e+06	1.63709e+06
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	NVNKPLLDEIVPVYR	NVNKPLLDEIVPVYR	2	NVNKPLLDEIVPVYR2	16341	8666.55	12673.8
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	NVNKPLLDEIVPVYR	NVNKPLLDEIVPVYR	3	NVNKPLLDEIVPVYR3	49164.5	50559.8	52428.1
D3ZUV3	D3ZUV3	D3ZUV3_RAT	Eif2a	Eukaryotic translation initiation factor 2A	1	NVNNEVHFFENNNFNTIANK	NVNNEVHFFENNNFNTIANK	3	NVNNEVHFFENNNFNTIANK3	3955.78		
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	NVNPNWSVNIK	NVNPNWSVNIK	2	NVNPNWSVNIK2	69035.1	59818.1	69821.3
P98166	P98166	VLDLR_RAT	Vldlr	Very low-density lipoprotein receptor	1	NVNQCLGPGK	NVNQC(UniMod:4)LGPGK	2	NVNQC(UniMod:4)LGPGK2	26878.7	27894.6	17968
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	NVNQLSPDGPLPQLPLPYINSSATR	NVNQLSPDGPLPQLPLPYINSSATR	3	NVNQLSPDGPLPQLPLPYINSSATR3	8471.57	14227.4	18996.3
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	NVNTMWTK	NVNTMWTK	2	NVNTMWTK2	212907	189564	180156
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	NVNVQNFHISWK	NVNVQNFHISWK	2	NVNVQNFHISWK2	97922.8	99826.6	101442
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	NVNVQNFHISWK	NVNVQNFHISWK	3	NVNVQNFHISWK3	432979	455973	470406
Q9JLH7	Q9JLH7	CK5P3_RAT	Cdk5rap3	CDK5 regulatory subunit-associated protein 3	1	NVNYEIPSLK	NVNYEIPSLK	2	NVNYEIPSLK2	42481	44090.1	39502.1
Q9JLH7	Q9JLH7	CK5P3_RAT	Cdk5rap3	CDK5 regulatory subunit-associated protein 3	1	NVNYEIPSLKK	NVNYEIPSLKK	2	NVNYEIPSLKK2	2661.19	871.355	2623.57
Q9JLH7	Q9JLH7	CK5P3_RAT	Cdk5rap3	CDK5 regulatory subunit-associated protein 3	1	NVNYEIPSLKK	NVNYEIPSLKK	3	NVNYEIPSLKK3	13845.9	17176.5	11230.1
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	NVNYSLASFLK	NVNYSLASFLK	2	NVNYSLASFLK2	5292.35	7410.13	5076.1
B5DEH2	B5DEH2	ERLN2_RAT	Erlin2	Erlin-2	1	NVPCGTSGGVMIYFDR	NVPC(UniMod:4)GTSGGVMIYFDR	2	NVPC(UniMod:4)GTSGGVMIYFDR2	32186.9	27558.6	20873.2
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	NVPGFLPTNDLSQPTGFLAQPMK	NVPGFLPTNDLSQPTGFLAQPMK	3	NVPGFLPTNDLSQPTGFLAQPMK3			7454.29
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	NVPGLATPSSPTQK	NVPGLATPSSPTQK	2	NVPGLATPSSPTQK2	39372.8	70643.9	33119.3
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	NVPLPEFPEHPFQEEHLK	NVPLPEFPEHPFQEEHLK	4	NVPLPEFPEHPFQEEHLK4	51679.2	21552.4	21379.1
Q62720	Q62720	ZNT1_RAT	Slc30a1	Proton-coupled zinc antiporter SLC30A1	1	NVPNKQPESSL	NVPNKQPESSL	2	NVPNKQPESSL2	61975.1	60408.8	48431.2
P56603	P56603	SCAM1_RAT	Scamp1	Secretory carrier-associated membrane protein 1	1	NVPPGLDEYNPFSDSR	NVPPGLDEYNPFSDSR	2	NVPPGLDEYNPFSDSR2	297807	295742	283468
F7FQB8	F7FQB8	F7FQB8_RAT	Kpna4	Karyopherin subunit alpha 4	1	NVPQEDICEDSDIDGDYR	NVPQEDIC(UniMod:4)EDSDIDGDYR	3	NVPQEDIC(UniMod:4)EDSDIDGDYR3	13395.3	6229.63	4341.47
A0A8I5ZWC6	A0A8I5ZWC6	A0A8I5ZWC6_RAT	Kpna3	Importin subunit alpha	1	NVPQEESLEDSDVDADFK	NVPQEESLEDSDVDADFK	3	NVPQEESLEDSDVDADFK3	2997.44	5601.13	10250.5
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	NVPSHGDQLFNK	NVPSHGDQLFNK	3	NVPSHGDQLFNK3	37175	43163.6	27401.7
P67779	P67779;A0A8I5ZJB1;A0A8I5ZRR7	PHB1_RAT	Phb1	Prohibitin 1	0	NVPVITGSK	NVPVITGSK	1	NVPVITGSK1	3718.63	4994.99	
P67779	P67779;A0A8I5ZJB1;A0A8I5ZRR7	PHB1_RAT	Phb1	Prohibitin 1	0	NVPVITGSK	NVPVITGSK	2	NVPVITGSK2	515527	491064	503558
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	NVPYGNIQSR	NVPYGNIQSR	2	NVPYGNIQSR2	437563	427033	476047
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	NVQAEEMVEFSSGLK	NVQAEEMVEFSSGLK	2	NVQAEEMVEFSSGLK2	103377	84200.2	96336.9
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	NVQAEEMVEFSSGLK	NVQAEEMVEFSSGLK	3	NVQAEEMVEFSSGLK3	106364	100411	92521
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	NVQESLQK	NVQESLQK	2	NVQESLQK2	33318.4	29532.5	24849.7
P04897	P10824;P04897;P08753	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	0	NVQFVFDAVTDVIIK	NVQFVFDAVTDVIIK	2	NVQFVFDAVTDVIIK2	18158.7	15716.3	19254.5
P04897	P10824;P04897;P08753	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	0	NVQFVFDAVTDVIIK	NVQFVFDAVTDVIIK	3	NVQFVFDAVTDVIIK3	56826.6	30644	46186.3
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	NVQGIIDILK	NVQGIIDILK	2	NVQGIIDILK2	20399.1	13041.6	12876.3
O35093	A0A8I6A2G5;O35093	TIM23_RAT	Timm23	Mitochondrial import inner membrane translocase subunit Tim23	0	NVQILNMVTR	NVQILNMVTR	2	NVQILNMVTR2	12484.3	25284.6	19689.2
A0A8I5ZXB9	A0A8I5ZXB9	A0A8I5ZXB9_RAT	Kifap3	Kinesin-associated protein 3	1	NVQLICEGNGLK	NVQLIC(UniMod:4)EGNGLK	2	NVQLIC(UniMod:4)EGNGLK2	7244.22	7411.11	4767
P63088	P63088	PP1G_RAT	Ppp1cc	Serine/threonine-protein phosphatase PP1-gamma catalytic subunit	1	NVQLQENEIR	NVQLQENEIR	2	NVQLQENEIR2	104446	91042.7	65406.3
P62138	P62138	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	1	NVQLTENEIR	NVQLTENEIR	2	NVQLTENEIR2	125466	125241	117872
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	NVQLVDTIEQSK	NVQLVDTIEQSK	2	NVQLVDTIEQSK2	119104	116182	117134
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	NVQPWHAGQYEILLK	NVQPWHAGQYEILLK	2	NVQPWHAGQYEILLK2	8997.18	6706.99	8917.29
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	NVQPWHAGQYEILLK	NVQPWHAGQYEILLK	3	NVQPWHAGQYEILLK3	60508.9	65326.7	62903.2
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	NVQSLAAAHHEK	NVQSLAAAHHEK	2	NVQSLAAAHHEK2	3508.51	4007.87	1662.61
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	NVQSLAAAHHEK	NVQSLAAAHHEK	3	NVQSLAAAHHEK3	15246	21520.7	13612
P07895	P07895	SODM_RAT	Sod2	Superoxide dismutase [Mn], mitochondrial	1	NVRPDYLK	NVRPDYLK	2	NVRPDYLK2	207893	190164	195667
B2RYG8	B2RYG8	ELP6_RAT	Elp6	Elongator complex protein 6	1	NVSFFAK	NVSFFAK	2	NVSFFAK2		26188.7	19715.3
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	NVSHNPLLLLTPQK	NVSHNPLLLLTPQK	2	NVSHNPLLLLTPQK2	27595.7	23049.3	24290.1
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	NVSHNPLLLLTPQK	NVSHNPLLLLTPQK	3	NVSHNPLLLLTPQK3	126174	109953	129945
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	NVSIGIVGK	NVSIGIVGK	1	NVSIGIVGK1	29945.7	27477.4	25673.5
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	NVSIGIVGK	NVSIGIVGK	2	NVSIGIVGK2	4.42477e+06	4.34425e+06	4.54705e+06
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	NVSINTVTYEWAPPVQNQALAR	NVSINTVTYEWAPPVQNQALAR	3	NVSINTVTYEWAPPVQNQALAR3	65114.3	58889.8	68690.5
Q769K2	Q769K2	NAPEP_RAT	Napepld	N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D	1	NVSIPNVLR	NVSIPNVLR	2	NVSIPNVLR2	29825.9	23627.3	28067
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	NVSLGNVLAVAYATK	NVSLGNVLAVAYATK	2	NVSLGNVLAVAYATK2	5493.23	6941.19	3544.75
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	NVSLGNVLAVAYATK	NVSLGNVLAVAYATK	3	NVSLGNVLAVAYATK3	5234.13	4930.24	
A0A8I5ZKJ3	A0A8I5ZKJ3	A0A8I5ZKJ3_RAT	Ndufa2	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2	1	NVSLNNLSAAEVTK	NVSLNNLSAAEVTK	2	NVSLNNLSAAEVTK2	37305.5	35890.9	35581.8
B1H257	B1H257	B1H257_RAT	Borcs5	BLOC-1-related complex subunit 5	1	NVSNDPDVIK	NVSNDPDVIK	2	NVSNDPDVIK2	23317.7	25805.4	21763.9
A0A8I5ZZZ6	A0A8I5ZZZ6	A0A8I5ZZZ6_RAT	Riok3	Serine/threonine-protein kinase RIO3	1	NVSQFFQK	NVSQFFQK	2	NVSQFFQK2	98852.4	84950.2	76731.3
Q9QY17	Q9QY17	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	1	NVSSYEK	NVSSYEK	1	NVSSYEK1	5361.38	2684.04	711.394
Q9QY17	Q9QY17	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	1	NVSSYEK	NVSSYEK	2	NVSSYEK2	125229	128996	143144
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	NVSTDSAENEEK	NVSTDSAENEEK	2	NVSTDSAENEEK2	16016.5		16495.7
Q64350	Q64350	EI2BE_RAT	Eif2b5	Translation initiation factor eIF-2B subunit epsilon	1	NVSVMTMVFK	NVSVMTMVFK	2	NVSVMTMVFK2	34143.1	32368.7	30349.4
Q99NA5	Q99NA5	IDH3A_RAT	Idh3a	Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial	1	NVTAIQGPGGK	NVTAIQGPGGK	2	NVTAIQGPGGK2	332486	272163	291021
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	NVTDSLR	NVTDSLR	2	NVTDSLR2	49275	47242.9	70225.8
A0A8I6AU33	A0A8I6AU33	A0A8I6AU33_RAT	Gpr89b	G protein-coupled receptor 89B	1	NVTDTDILALER	NVTDTDILALER	2	NVTDTDILALER2	3182.48	4703.54	4844.59
Q6AYT3	Q6AYT3	RTCB_RAT	Rtcb	RNA-splicing ligase RtcB homolog	1	NVTDVVNTCHDAGISK	NVTDVVNTC(UniMod:4)HDAGISK	2	NVTDVVNTC(UniMod:4)HDAGISK2	2370.79		1835.41
Q6AYT3	Q6AYT3	RTCB_RAT	Rtcb	RNA-splicing ligase RtcB homolog	1	NVTDVVNTCHDAGISK	NVTDVVNTC(UniMod:4)HDAGISK	3	NVTDVVNTC(UniMod:4)HDAGISK3	15529.2	13287.8	33714.7
Q6AYT3	Q6AYT3	RTCB_RAT	Rtcb	RNA-splicing ligase RtcB homolog	1	NVTDVVNTCHDAGISKK	NVTDVVNTC(UniMod:4)HDAGISKK	3	NVTDVVNTC(UniMod:4)HDAGISKK3	7757.42	6189.05	4628.58
P61983	P61983	1433G_RAT	Ywhag	14-3-3 protein gamma	1	NVTELNEPLSNEER	NVTELNEPLSNEER	2	NVTELNEPLSNEER2	1.2337e+06	1.06182e+06	1.08765e+06
P61983	P61983	1433G_RAT	Ywhag	14-3-3 protein gamma	1	NVTELNEPLSNEER	NVTELNEPLSNEER	3	NVTELNEPLSNEER3	160790	131785	163941
F1LM66	F1LM66	F1LM66_RAT	Eftud2	116 kDa U5 small nuclear ribonucleoprotein component	1	NVTLCGHLHHGK	NVTLC(UniMod:4)GHLHHGK	3	NVTLC(UniMod:4)GHLHHGK3	21344.2	13001.6	
O35760	O35760	IDI1_RAT	Idi1	Isopentenyl-diphosphate Delta-isomerase 1	1	NVTLNPDPNEIK	NVTLNPDPNEIK	2	NVTLNPDPNEIK2	11223.4	8813.42	17023.5
P50878	A0A8I6AL38;A0A8I6ASF5;P50878	RL4_RAT	Rpl4	Large ribosomal subunit protein uL4	0	NVTLPAVFK	NVTLPAVFK	2	NVTLPAVFK2	25185.2	24150.8	25255.6
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	NVTNNLK	NVTNNLK	1	NVTNNLK1	253732	280881	300306
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	NVTNNLK	NVTNNLK	2	NVTNNLK2	2.01067e+07	2.55054e+07	2.63557e+07
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	NVTNSHSNQPSNEDDAIK	NVTNSHSNQPSNEDDAIK	3	NVTNSHSNQPSNEDDAIK3	2606.35		
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	NVTQTSMDTLK	NVTQTSMDTLK	2	NVTQTSMDTLK2	46774.9	48353.7	49936.3
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	NVTSWFTSK	NVTSWFTSK	2	NVTSWFTSK2	28923.5	16552.8	26306.5
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	NVTVLFLHSNK	NVTVLFLHSNK	2	NVTVLFLHSNK2	146773	105221	132375
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	NVTVLFLHSNK	NVTVLFLHSNK	3	NVTVLFLHSNK3	230240	242129	281366
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	NVTVQPDDPISFMQLTAK	NVTVQPDDPISFMQLTAK	3	NVTVQPDDPISFMQLTAK3	19344.3	28780.5	21743.1
A0A8I5ZWC6	A0A8I5ZWC6	A0A8I5ZWC6_RAT	Kpna3	Importin subunit alpha	1	NVTWVIVNLCR	NVTWVIVNLC(UniMod:4)R	2	NVTWVIVNLC(UniMod:4)R2	5150.12	3661.39	5369.71
F7FQB8	F7FQB8	F7FQB8_RAT	Kpna4	Karyopherin subunit alpha 4	1	NVTWVMVNLCR	NVTWVMVNLC(UniMod:4)R	2	NVTWVMVNLC(UniMod:4)R2	19915.8	21893.1	26267.9
B2RZ57	B2RZ57	B2RZ57_RAT	Mrpl18	Mitochondrial ribosomal protein L18	1	NVVACESVGR	NVVAC(UniMod:4)ESVGR	2	NVVAC(UniMod:4)ESVGR2		29501.4	8946.48
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	NVVAECLGK	NVVAEC(UniMod:4)LGK	2	NVVAEC(UniMod:4)LGK2	272359	292226	225861
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	NVVALDTEVANNR	NVVALDTEVANNR	2	NVVALDTEVANNR2	89473.5	89209.8	96214.6
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	NVVALDTEVANNR	NVVALDTEVANNR	3	NVVALDTEVANNR3	3813.61	2135.26	4155.11
A0A0G2K528	A0A0G2K528	A0A0G2K528_RAT	Stx16	Syntaxin 16	1	NVVASLAQALQELSTSFR	NVVASLAQALQELSTSFR	3	NVVASLAQALQELSTSFR3	4834.82		
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	NVVDGPYAGVMTAYDLK	NVVDGPYAGVMTAYDLK	2	NVVDGPYAGVMTAYDLK2	15226.9	9594.95	5864.78
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	NVVDGPYAGVMTAYDLKK	NVVDGPYAGVMTAYDLKK	3	NVVDGPYAGVMTAYDLKK3	7103.98	19603.2	11825.3
D3ZTN1	D3ZTN1	D3ZTN1_RAT	Tesc	Tescalcin	1	NVVEELLSGNPHIEK	NVVEELLSGNPHIEK	2	NVVEELLSGNPHIEK2	26939.3	34195.8	26788.9
D3ZTN1	D3ZTN1	D3ZTN1_RAT	Tesc	Tescalcin	1	NVVEELLSGNPHIEK	NVVEELLSGNPHIEK	3	NVVEELLSGNPHIEK3	136281	144306	136293
P05545	A0A0G2JSK1;P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	0	NVVFSPLSISAALAILSLGAK	NVVFSPLSISAALAILSLGAK	3	NVVFSPLSISAALAILSLGAK3		4458.91	11647
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	NVVFSPLSISAALAVVSLGAK	NVVFSPLSISAALAVVSLGAK	3	NVVFSPLSISAALAVVSLGAK3		23810.9	19911.2
P05544	P05544	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	1	NVVFSPLSISAALTILSLGAK	NVVFSPLSISAALTILSLGAK	3	NVVFSPLSISAALTILSLGAK3		43109.9	58915.1
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	NVVFVDMGHSAYQVSVCAFNR	NVVFVDMGHSAYQVSVC(UniMod:4)AFNR	3	NVVFVDMGHSAYQVSVC(UniMod:4)AFNR3	34631.1	45978.5	41461.4
A0A0G2K089	A0A0G2K089	A0A0G2K089_RAT	Dennd4c	DENN domain containing 4C	1	NVVHGLAQFR	NVVHGLAQFR	3	NVVHGLAQFR3	5920.33	5424.68	
P63036	P63036	DNJA1_RAT	Dnaja1	DnaJ homolog subfamily A member 1	1	NVVHQLSVTLEDLYNGATR	NVVHQLSVTLEDLYNGATR	3	NVVHQLSVTLEDLYNGATR3	22621.2	17045.9	11474.3
Q4QR73	A0A8I6AG59;Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	0	NVVHQLSVTLEDLYNGITK	NVVHQLSVTLEDLYNGITK	3	NVVHQLSVTLEDLYNGITK3	21142.6	15036	18424.8
Q4QR73	A0A8I6AG59;Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	0	NVVHQLSVTLEDLYNGITKK	NVVHQLSVTLEDLYNGITKK	3	NVVHQLSVTLEDLYNGITKK3	5264.7		
Q4QR73	A0A8I6AG59;Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	0	NVVHQLSVTLEDLYNGITKK	NVVHQLSVTLEDLYNGITKK	4	NVVHQLSVTLEDLYNGITKK4	22226.7	19271.8	14111.7
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	NVVHTECWVTGWGYTK	NVVHTEC(UniMod:4)WVTGWGYTK	2	NVVHTEC(UniMod:4)WVTGWGYTK2	1979.58		5318.93
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	NVVHTECWVTGWGYTK	NVVHTEC(UniMod:4)WVTGWGYTK	3	NVVHTEC(UniMod:4)WVTGWGYTK3	16131.8	14472.2	13577.4
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	NVVLGVAQFK	NVVLGVAQFK	2	NVVLGVAQFK2	46249.7	52693.5	37816.1
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	NVVLQTLEGHLR	NVVLQTLEGHLR	3	NVVLQTLEGHLR3	13775.9	14780.4	26407.9
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	NVVLQTNK	NVVLQTNK	1	NVVLQTNK1	32838.6	28678.4	30310.7
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	NVVLQTNK	NVVLQTNK	2	NVVLQTNK2	2.51535e+06	2.36919e+06	2.15115e+06
P62716	A0A0G2JYA4;P63331;P62716	PP2AB_RAT	Ppp2cb	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	0	NVVTIFSAPNYCYR	NVVTIFSAPNYC(UniMod:4)YR	2	NVVTIFSAPNYC(UniMod:4)YR2	110822	115781	91260
P62716	A0A0G2JYA4;P63331;P62716	PP2AB_RAT	Ppp2cb	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	0	NVVTIFSAPNYCYR	NVVTIFSAPNYC(UniMod:4)YR	3	NVVTIFSAPNYC(UniMod:4)YR3	18393.1	24242.1	19055.1
Q63415	Q63415	PCSK6_RAT	Pcsk6	Proprotein convertase subtilisin/kexin type 6	1	NVVVTILDDGIER	NVVVTILDDGIER	2	NVVVTILDDGIER2			7492.62
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	NVWLHLEGPGVMR	NVWLHLEGPGVMR	2	NVWLHLEGPGVMR2	7840.17	10440.4	3932.53
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	NVWLHLEGPGVMR	NVWLHLEGPGVMR	3	NVWLHLEGPGVMR3	76308.2	48749.5	48791.6
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	NVWLHLEGPGVMRPK	NVWLHLEGPGVMRPK	2	NVWLHLEGPGVMRPK2	7870.06	4490.47	3698.6
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	NVWLHLEGPGVMRPK	NVWLHLEGPGVMRPK	3	NVWLHLEGPGVMRPK3	165877	128845	122028
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	NVWLHLEGPGVMRPK	NVWLHLEGPGVMRPK	4	NVWLHLEGPGVMRPK4	298203	280269	253241
E9PTT0	E9PTT0	ZDH17_RAT	Zdhhc17	Palmitoyltransferase ZDHHC17	1	NVWMINHLQEAR	NVWMINHLQEAR	3	NVWMINHLQEAR3	10078.5	6836.12	3660.02
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	NVWSFLK	NVWSFLK	2	NVWSFLK2	88303.2	95805.2	65456
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	NVYAIVMLTK	NVYAIVMLTK	2	NVYAIVMLTK2	98827.3	116459	136258
Q5RJM1	Q5RJM1	PORED_RAT	Srd5a3	Polyprenol reductase	1	NVYALGK	NVYALGK	2	NVYALGK2	71531.6	56782	78503.5
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	NVYDLTSIPVR	NVYDLTSIPVR	2	NVYDLTSIPVR2	78088.1	84037.2	82514.3
P11505	Q64542;Q64568;P11505;P11506	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	0	NVYDSISK	NVYDSISK	2	NVYDSISK2	24417.3	15707.1	23326.9
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	NVYGNIEDLVVHMK	NVYGNIEDLVVHMK	3	NVYGNIEDLVVHMK3	11099.3	9171.49	7239.78
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	NVYVNLDMK	NVYVNLDMK	2	NVYVNLDMK2	14649.4	18545.2	19765.6
P80067	P80067	CATC_RAT	Ctsc	Dipeptidyl peptidase 1	1	NWACFVGK	NWAC(UniMod:4)FVGK	2	NWAC(UniMod:4)FVGK2	35494.7	33054.4	39254.3
D3ZCT7	D3ZCT7	D3ZCT7_RAT	Sec23b	Protein transport protein SEC23	1	NWADAQSQLR	NWADAQSQLR	2	NWADAQSQLR2	11790.4	11285.5	18350.8
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	NWAEVFGEGNMFAVSPVSTFQK	NWAEVFGEGNMFAVSPVSTFQK	3	NWAEVFGEGNMFAVSPVSTFQK3	13800.8	12227.8	10762.8
P98105	P98105	LYAM2_RAT	Sele	E-selectin	1	NWAPGEPNNK	NWAPGEPNNK	2	NWAPGEPNNK2	50611.9	72549.7	83257.5
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	NWCAHVHTK	NWC(UniMod:4)AHVHTK	3	NWC(UniMod:4)AHVHTK3	25230.8	13339.4	24538.1
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	NWCAYVVTR	NWC(UniMod:4)AYVVTR	2	NWC(UniMod:4)AYVVTR2	107405	80924.1	90129.1
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	NWCPYQK	NWC(UniMod:4)PYQK	2	NWC(UniMod:4)PYQK2	23371.1	25589.9	26174.4
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	NWDDIENK	NWDDIENK	2	NWDDIENK2	22205.2	12181.1	17524.3
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	NWDDVLTVDYTR	NWDDVLTVDYTR	2	NWDDVLTVDYTR2	130285	164399	135522
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	NWDDVLTVDYTR	NWDDVLTVDYTR	3	NWDDVLTVDYTR3	5544.93	8968.73	7236.11
P28840	P28840	NEC1_RAT	Pcsk1	Neuroendocrine convertase 1	1	NWDFMSVHTWGENPVGTWTLK	NWDFMSVHTWGENPVGTWTLK	3	NWDFMSVHTWGENPVGTWTLK3		2480.05	5476.15
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	NWDPAQLSR	NWDPAQLSR	2	NWDPAQLSR2	48259	61984.7	65888.2
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	NWDVSAALSDFEQLR	NWDVSAALSDFEQLR	2	NWDVSAALSDFEQLR2	8360.16	10870.5	12195.2
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	NWDVSAALSDFEQLR	NWDVSAALSDFEQLR	3	NWDVSAALSDFEQLR3			4523.89
Q5HZE2	Q5HZE2	TACAN_RAT	Tmem120a	Ion channel TACAN	1	NWEDLQQDFQGIQETHR	NWEDLQQDFQGIQETHR	3	NWEDLQQDFQGIQETHR3	16887.7	10993.8	18726.2
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	NWEFMTIHCWGER	NWEFMTIHC(UniMod:4)WGER	3	NWEFMTIHC(UniMod:4)WGER3	11723	29884.5	31834.6
D3ZUU6	D3ZUU6	D3ZUU6_RAT	Clec3b	C-type lectin domain family 3, member B	1	NWETEITTQPDGGK	NWETEITTQPDGGK	2	NWETEITTQPDGGK2	16154.6	24352	11511
P19939	P19939	APOC1_RAT	Apoc1	Apolipoprotein C-I	1	NWFSETLNK	NWFSETLNK	2	NWFSETLNK2	142602	150927	150710
A0A8I5ZU41	A0A8I5ZU41	A0A8I5ZU41_RAT	Amy1	Alpha-amylase	1	NWGEGWGFMPSDR	NWGEGWGFMPSDR	2	NWGEGWGFMPSDR2	12713.4	7471.11	
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	NWGLASTR	NWGLASTR	2	NWGLASTR2	67778.5	109217	72518
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	NWIEALR	NWIEALR	2	NWIEALR2	29874.6	24157	33323.6
Q0H8B9	Q0H8B9;A4KWA8;A0A8I6AHW1;A4KWA5;Q925N7	CL2DB_RAT	Clec2d11	C-type lectin domain family 2 member D11	0	NWIGVGNK	NWIGVGNK	2	NWIGVGNK2	40203.3	38733.1	44385.7
D4A8B0	D4A8B0	D4A8B0_RAT	Sec14l5	SEC14-like lipid binding 5	1	NWILGVDYSR	NWILGVDYSR	2	NWILGVDYSR2	17661.9	21405.3	17698.5
P23640	P23640	RB27A_RAT	Rab27a	Ras-related protein Rab-27A	1	NWISQLQMHAYCENPDIVLCGNK	NWISQLQMHAYC(UniMod:4)ENPDIVLC(UniMod:4)GNK	3	NWISQLQMHAYC(UniMod:4)ENPDIVLC(UniMod:4)GNK3	31986.3	23725.1	23598.5
A0A0G2K162	Q9JMB3;A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	0	NWLDPAK	NWLDPAK	2	NWLDPAK2	26549.6	29833.1	15287.1
Q5XIL4	Q5XIL4	Q5XIL4_RAT	Sorbs3	Sorbin and SH3 domain containing 3	1	NWLEGEHHGR	NWLEGEHHGR	3	NWLEGEHHGR3	21444.5	23777.2	29453.1
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	NWLQENPNR	NWLQENPNR	2	NWLQENPNR2	3.99148e+06	4.3806e+06	4.57549e+06
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	NWLQENPNR	NWLQENPNR	3	NWLQENPNR3	19393.3	13413.6	15197.4
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	NWLQENPNRVYLWK	NWLQENPNRVYLWK	3	NWLQENPNRVYLWK3	20252.4	27564.2	24240.4
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	NWLTQDTLHPLMDK	NWLTQDTLHPLMDK	2	NWLTQDTLHPLMDK2	17301.8	20640.8	18261.5
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	NWLTQDTLHPLMDK	NWLTQDTLHPLMDK	3	NWLTQDTLHPLMDK3	165306	146512	139191
Q9QWJ9	Q9QWJ9	NRP1_RAT	Nrp1	Neuropilin-1	1	NWMPENIR	NWMPENIR	2	NWMPENIR2		21747.6	
Q99P74	Q99P74	RB27B_RAT	Rab27b	Ras-related protein Rab-27B	1	NWMSQLQANAYCENPDIVLIGNK	NWMSQLQANAYC(UniMod:4)ENPDIVLIGNK	3	NWMSQLQANAYC(UniMod:4)ENPDIVLIGNK3	113116	159406	148117
Q5PQP8	Q5PQP8	Q5PQP8_RAT	Cuedc1	CUE domain containing 1	1	NWNPPLLGNLPDDFLR	NWNPPLLGNLPDDFLR	2	NWNPPLLGNLPDDFLR2		2905.95	1575.3
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	NWNTTFYEGTWR	NWNTTFYEGTWR	2	NWNTTFYEGTWR2	148598	140539	134810
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	NWNTTFYEGTWR	NWNTTFYEGTWR	3	NWNTTFYEGTWR3	8583.52	16294.1	6194.15
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	NWPGGPGR	NWPGGPGR	2	NWPGGPGR2	399545	403379	376125
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	NWPSDEMPDFPK	NWPSDEMPDFPK	2	NWPSDEMPDFPK2	106551	94147.6	96250.4
Q05096	Q05096	MYO1B_RAT	Myo1b	Unconventional myosin-Ib	1	NWPSRPYLFLDSTHK	NWPSRPYLFLDSTHK	4	NWPSRPYLFLDSTHK4	5493.98	4714.25	6767.93
Q6P780	Q6P780	Q6P780_RAT	Nfkbie	NFKB inhibitor epsilon	1	NWQGLACLHIATLQR	NWQGLAC(UniMod:4)LHIATLQR	3	NWQGLAC(UniMod:4)LHIATLQR3	2645.12		
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	NWQTPLHIAAANK	NWQTPLHIAAANK	3	NWQTPLHIAAANK3	7824.6	9436.85	6075.46
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	NWQYQETIK	NWQYQETIK	2	NWQYQETIK2	98208.1	97182.9	104870
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	NWQYQETIKK	NWQYQETIKK	2	NWQYQETIKK2	6412.33	5015.14	7012.27
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	NWQYQETIKK	NWQYQETIKK	3	NWQYQETIKK3	23558.7	19689.5	26138.9
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	NWRDPDQTDGPGLSYLSSHIANVER	NWRDPDQTDGPGLSYLSSHIANVER	3	NWRDPDQTDGPGLSYLSSHIANVER3	212806	206039	162662
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	NWRDPDQTDGPGLSYLSSHIANVER	NWRDPDQTDGPGLSYLSSHIANVER	4	NWRDPDQTDGPGLSYLSSHIANVER4	1.35887e+06	1.56289e+06	1.51812e+06
Q63632	G3V6N7;Q63632	S12A4_RAT	Slc12a4	Solute carrier family 12 member 4	0	NWRPQLLVLLK	NWRPQLLVLLK	3	NWRPQLLVLLK3	13701.8	5980.64	7441.3
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	NWSAAGNAFCQAAQLHLQLQSK	NWSAAGNAFC(UniMod:4)QAAQLHLQLQSK	3	NWSAAGNAFC(UniMod:4)QAAQLHLQLQSK3	84691	63718	81117.5
D3ZKT0	D3ZKT0	TAM41_RAT	Tamm41	Phosphatidate cytidylyltransferase, mitochondrial	1	NWSHYSLLK	NWSHYSLLK	3	NWSHYSLLK3	6136.88	5973.58	5865.81
Q63175	Q63175	SERC5_RAT	Serinc5	Serine incorporator 5	1	NWTAGTVR	NWTAGTVR	2	NWTAGTVR2	61316.6	50772	51665.9
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	NWVFQVSK	NWVFQVSK	2	NWVFQVSK2	23752.6	24966.2	25365.5
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	NWVVTGADDMQIR	NWVVTGADDMQIR	2	NWVVTGADDMQIR2	126584	126948	126088
D3ZYW7	D3ZYW7	FRDA_RAT	Fxn	Frataxin, mitochondrial	1	NWVYSHDGVSLHELLAR	NWVYSHDGVSLHELLAR	3	NWVYSHDGVSLHELLAR3	3824.17	4232.82	11052.5
D3ZYW7	D3ZYW7	FRDA_RAT	Fxn	Frataxin, mitochondrial	1	NWVYSHDGVSLHELLAR	NWVYSHDGVSLHELLAR	4	NWVYSHDGVSLHELLAR4		3575.26	4240.32
P02454	P02454	CO1A1_RAT	Col1a1	Collagen alpha-1(I) chain	1	NWYISPNPK	NWYISPNPK	2	NWYISPNPK2	25847.2	27060.9	26544.2
Q6UPR8	Q6UPR8	ERMP1_RAT	Ermp1	Endoplasmic reticulum metallopeptidase 1	1	NWYLPAPEISPR	NWYLPAPEISPR	2	NWYLPAPEISPR2	55445.6	51286	57971.1
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	NWYQGAICGK	NWYQGAIC(UniMod:4)GK	2	NWYQGAIC(UniMod:4)GK2	52215.6	61774.1	63347.2
A0A8I6B3N0	A0A8I6B3N0;E9PSK7	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	0	NYADQISR	NYADQISR	2	NYADQISR2	59104.6	74362.1	59265.6
P02770	P02770	ALBU_RAT	Alb	Albumin	1	NYAEAKDVFLGTFLYEYSR	NYAEAKDVFLGTFLYEYSR	3	NYAEAKDVFLGTFLYEYSR3	14353.4	13324.2	7719.82
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	NYAELTIMK	NYAELTIMK	2	NYAELTIMK2	15783	21169.3	20120.1
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	NYAELTVMK	NYAELTVMK	2	NYAELTVMK2	17024.7	29527.8	25950.4
P01026	P01026	CO3_RAT	C3	Complement C3	1	NYAGVFMDAGLTFK	NYAGVFMDAGLTFK	2	NYAGVFMDAGLTFK2	235095	209778	225573
P01026	P01026	CO3_RAT	C3	Complement C3	1	NYAGVFMDAGLTFK	NYAGVFMDAGLTFK	3	NYAGVFMDAGLTFK3	5787.43	8330.54	8355.04
Q9WTT7	Q9WTT7	5MP1_RAT	Bzw2	eIF5-mimic protein 1	1	NYAQVFNK	NYAQVFNK	2	NYAQVFNK2	21749.6	21731.3	19677.2
A0A8I5ZYN9	A0A8I5ZYN9	A0A8I5ZYN9_RAT	Ipo11-ps1	Similar to importin 11	1	NYAYKPSK	NYAYKPSK	2	NYAYKPSK2	104947		122578
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	NYCNIQVTK	NYC(UniMod:4)NIQVTK	2	NYC(UniMod:4)NIQVTK2	87901.5	99271.5	113782
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	NYDESGSPR	NYDESGSPR	2	NYDESGSPR2	40679.9		22414
Q6IE70	Q6IE70	PAN2_RAT	Pan2	PAN2-PAN3 deadenylation complex catalytic subunit Pan2	1	NYDFAQVLK	NYDFAQVLK	2	NYDFAQVLK2	8289.42	7404.88	11038.8
O08623	O08623	SQSTM_RAT	Sqstm1	Sequestosome-1	1	NYDIGAALDTIQYSK	NYDIGAALDTIQYSK	2	NYDIGAALDTIQYSK2	29814.9	26259.5	21839.8
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	NYDYSEPGR	NYDYSEPGR	2	NYDYSEPGR2	58120.5	58979.4	62634.2
D4A8L5	D4A8L5	D4A8L5_RAT	Mocs3	Adenylyltransferase and sulfurtransferase MOCS3	1	NYEAFCGSSATDK	NYEAFC(UniMod:4)GSSATDK	2	NYEAFC(UniMod:4)GSSATDK2	920.864	2016.06	
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	NYEASMSHVDK	NYEASMSHVDK	2	NYEASMSHVDK2	43945	37178.4	24426.3
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	NYEASMSHVDK	NYEASMSHVDK	3	NYEASMSHVDK3	63395.6	78440.1	69415.3
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	NYEASMSHVDKFVK	NYEASMSHVDKFVK	3	NYEASMSHVDKFVK3	8534.4	7032.39	18560.2
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	NYECLVNTLLDGVEQR	NYEC(UniMod:4)LVNTLLDGVEQR	2	NYEC(UniMod:4)LVNTLLDGVEQR2	2268.86	2099.31	
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	NYECLVNTLLDGVEQR	NYEC(UniMod:4)LVNTLLDGVEQR	3	NYEC(UniMod:4)LVNTLLDGVEQR3	6815.31	7539.4	7102.24
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	NYEDDSPK	NYEDDSPK	1	NYEDDSPK1	149756	155262	123429
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	NYEDDSPK	NYEDDSPK	2	NYEDDSPK2	2.4478e+06	2.66059e+06	2.62677e+06
Q793F9	Q793F9	VPS4A_RAT	Vps4a	Vacuolar protein sorting-associated protein 4A	1	NYEEALR	NYEEALR	2	NYEEALR2	13234.4	16548.5	23725.1
Q63584	Q63584	TMEDA_RAT	Tmed10	Transmembrane emp24 domain-containing protein 10	1	NYEEIAK	NYEEIAK	1	NYEEIAK1	16468.8	12317.4	12315.3
Q63584	Q63584	TMEDA_RAT	Tmed10	Transmembrane emp24 domain-containing protein 10	1	NYEEIAK	NYEEIAK	2	NYEEIAK2	512829	482998	548400
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	NYELLDVVEAVR	NYELLDVVEAVR	2	NYELLDVVEAVR2	6996.68	6521.85	5354.61
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	NYELLYLAEQFAGVVLYLK	NYELLYLAEQFAGVVLYLK	3	NYELLYLAEQFAGVVLYLK3		1338.06	5758.69
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	NYELLYLAEQFAGVVLYLKFRLPDITR	NYELLYLAEQFAGVVLYLKFRLPDITR	4	NYELLYLAEQFAGVVLYLKFRLPDITR4			10007.2
B5DEH2	B5DEH2	ERLN2_RAT	Erlin2	Erlin-2	1	NYELMESEK	NYELMESEK	2	NYELMESEK2	30137.6	42416.7	47711.6
A0A8I6AVP7	A0A8I6AVP7	A0A8I6AVP7_RAT	Odr4	Protein odr-4 homolog	1	NYELPQR	NYELPQR	2	NYELPQR2	20994.9	17813.2	20390.6
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	NYEQLFSYMNSQPHLK	NYEQLFSYMNSQPHLK	3	NYEQLFSYMNSQPHLK3	2867.84	6063.24	5194.56
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	NYEQWQLQR	NYEQWQLQR	2	NYEQWQLQR2	23023.6	33923.5	26824.5
B4F767	B4F767	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	1	NYEQWQSQR	NYEQWQSQR	2	NYEQWQSQR2	7487.52	12286.2	10980.2
D3ZXK7	D3ZXK7	RN123_RAT	Rnf123	E3 ubiquitin-protein ligase RNF123	1	NYFGPVHSMEELPGYEETLTR	NYFGPVHSMEELPGYEETLTR	3	NYFGPVHSMEELPGYEETLTR3	7096.46	10103.8	4771.86
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	NYFLLSSSMDK	NYFLLSSSMDK	2	NYFLLSSSMDK2	79409.4	110222	86204.9
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	NYFNLPDIY	NYFNLPDIY	2	NYFNLPDIY2	2405.37	4500.55	7684.53
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	NYGADEEAAGALLK	NYGADEEAAGALLK	2	NYGADEEAAGALLK2	12952.8	15822.3	10913.6
Q9ERE6	Q9ERE6;A0A0G2K1P8	MPRIP_RAT	Mprip	Myosin phosphatase Rho-interacting protein	0	NYGFQIHTK	NYGFQIHTK	2	NYGFQIHTK2	7468.6	19256.7	
D3ZRC4	D3ZRC4	PLPL8_RAT	Pnpla8	Calcium-independent phospholipase A2-gamma	1	NYGHFPGTNSHYLGGCQYK	NYGHFPGTNSHYLGGC(UniMod:4)QYK	4	NYGHFPGTNSHYLGGC(UniMod:4)QYK4		5152.5	4234.86
D3Z898	D3Z898	D3Z898_RAT	Samhd1	Deoxynucleoside triphosphate triphosphohydrolase SAMHD1	1	NYGLVPEEDITFIK	NYGLVPEEDITFIK	2	NYGLVPEEDITFIK2	8655.79	3552.06	4231.49
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	NYGPEVWEDIK	NYGPEVWEDIK	2	NYGPEVWEDIK2	66298.1	66254.3	50060
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	NYGPEVWEDIKK	NYGPEVWEDIKK	2	NYGPEVWEDIKK2	10727.8	21505.8	26178.3
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	NYGPEVWEDIKK	NYGPEVWEDIKK	3	NYGPEVWEDIKK3	134518	127420	89139.7
A0A8I6GJ42	A0A8I6GJ42	A0A8I6GJ42_RAT	Helz	Helicase with zinc finger	1	NYGQADEDCR	NYGQADEDC(UniMod:4)R	2	NYGQADEDC(UniMod:4)R2	2667.19		
A0A8J8YHW4	A0A8J8YHW4	A0A8J8YHW4_RAT	Clk2	Secretory carrier-associated membrane protein	1	NYGSYSTQATAAAATAELLK	NYGSYSTQATAAAATAELLK	3	NYGSYSTQATAAAATAELLK3	8116.28	10400	11745.5
A0A8J8YHW4	A0A8J8YHW4	A0A8J8YHW4_RAT	Clk2	Secretory carrier-associated membrane protein	1	NYGSYSTQATAAAATAELLKK	NYGSYSTQATAAAATAELLKK	3	NYGSYSTQATAAAATAELLKK3	12764.2	13892.4	7659.48
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	NYGVIIPYPPSNR	NYGVIIPYPPSNR	2	NYGVIIPYPPSNR2	24178.4	36626.1	35470.1
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	NYHMYVYPVHWQFNELDQHPADR	NYHMYVYPVHWQFNELDQHPADR	4	NYHMYVYPVHWQFNELDQHPADR4	252864	310675	247712
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	NYHVEVLIPPSISK	NYHVEVLIPPSISK	3	NYHVEVLIPPSISK3	37671.1	38673.2	40760.6
P53610	P53610	PGTB1_RAT	Pggt1b	Geranylgeranyl transferase type-1 subunit beta	1	NYILSTQDR	NYILSTQDR	2	NYILSTQDR2	20781.4	9399.08	18216.9
Q9JHX4	Q9JHX4	CASP8_RAT	Casp8	Caspase-8	1	NYIPDEADFLLGMATVK	NYIPDEADFLLGMATVK	2	NYIPDEADFLLGMATVK2	15194.3	5953.21	10897.7
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	NYIQSLAQMPK	NYIQSLAQMPK	2	NYIQSLAQMPK2	637701	650028	662496
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	NYIQSLAQMPK	NYIQSLAQMPK	3	NYIQSLAQMPK3	4510.4	9128.24	6141.91
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	NYITGDELR	NYITGDELR	2	NYITGDELR2	5.40408e+06	5.67827e+06	5.27337e+06
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	NYITGDELRR	NYITGDELRR	2	NYITGDELRR2	42865.9	55481.7	58721.5
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	NYITGDELRR	NYITGDELRR	3	NYITGDELRR3	1.8016e+06	2.02009e+06	2.91102e+06
A0JPJ7	A0JPJ7	OLA1_RAT	Ola1	Obg-like ATPase 1	1	NYIVEDGDIIFFK	NYIVEDGDIIFFK	2	NYIVEDGDIIFFK2	11133.4	14166	16948.6
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	NYIYEDAYDK	NYIYEDAYDK	2	NYIYEDAYDK2	30150.3	38464	39073.4
B2GV54	B2GV54	NCEH1_RAT	Nceh1	Neutral cholesterol ester hydrolase 1	1	NYKPVLQTIGDAR	NYKPVLQTIGDAR	2	NYKPVLQTIGDAR2	50332.5	32493.8	37997.5
B2GV54	B2GV54	NCEH1_RAT	Nceh1	Neutral cholesterol ester hydrolase 1	1	NYKPVLQTIGDAR	NYKPVLQTIGDAR	3	NYKPVLQTIGDAR3	73625.2	77368.2	59549.6
F1M5J8	F1M5J8;A0A8I6G8Z3;A0A8I5ZLJ1	F1M5J8_RAT	ENSRNOG00000067894	Ig-like domain-containing protein	0	NYLAWYQQK	NYLAWYQQK	2	NYLAWYQQK2	394412	332218	328328
F1M5J8	F1M5J8;A0A8I6G8Z3	F1M5J8_RAT	ENSRNOG00000067894	Ig-like domain-containing protein	0	NYLAWYQQKPGQSPK	NYLAWYQQKPGQSPK	2	NYLAWYQQKPGQSPK2	121895	113189	121710
F1M5J8	F1M5J8;A0A8I6G8Z3	F1M5J8_RAT	ENSRNOG00000067894	Ig-like domain-containing protein	0	NYLAWYQQKPGQSPK	NYLAWYQQKPGQSPK	3	NYLAWYQQKPGQSPK3	2.6931e+06	2.81561e+06	3.06893e+06
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	NYLEPGK	NYLEPGK	1	NYLEPGK1	6760.98	7529.87	5077.2
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	NYLEPGK	NYLEPGK	2	NYLEPGK2	281608	251756	258994
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	NYLEPGKECAQPATK	NYLEPGKEC(UniMod:4)AQPATK	3	NYLEPGKEC(UniMod:4)AQPATK3	21092.1	13984.3	15513.3
Q63750	Q63750	RM23_RAT	Mrpl23	Large ribosomal subunit protein uL23m	1	NYLEQIYNVPVAAVR	NYLEQIYNVPVAAVR	2	NYLEQIYNVPVAAVR2	2361.18		2296.61
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	NYLGGFALSVAHNR	NYLGGFALSVAHNR	2	NYLGGFALSVAHNR2	7612.04	4410.03	5617.67
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	NYLGGFALSVAHNR	NYLGGFALSVAHNR	3	NYLGGFALSVAHNR3	39574.8	53511.6	26260
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	NYLHYSLYDQAEK	NYLHYSLYDQAEK	2	NYLHYSLYDQAEK2	6243.52	9073.46	3999.53
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	NYLHYSLYDQAEK	NYLHYSLYDQAEK	3	NYLHYSLYDQAEK3	107912	126550	112909
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	NYLILCCSAAASPSPSAPAGSVR	NYLILC(UniMod:4)C(UniMod:4)SAAASPSPSAPAGSVR	3	NYLILC(UniMod:4)C(UniMod:4)SAAASPSPSAPAGSVR3	8091.04	12356.1	3038.83
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	NYLLQCTR	NYLLQC(UniMod:4)TR	2	NYLLQC(UniMod:4)TR2	80405.5	62691.1	101299
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	NYLLSLPHK	NYLLSLPHK	2	NYLLSLPHK2	140345	170687	123669
A0A8I6AAD8	A0A8I6AAD8	A0A8I6AAD8_RAT	Snx4	Sorting nexin 4	1	NYLLVYYPHVVVPPLPEK	NYLLVYYPHVVVPPLPEK	3	NYLLVYYPHVVVPPLPEK3	1540.46	12101	9922.28
P13721	P13721	SIAT1_RAT	St6gal1	Beta-galactoside alpha-2,6-sialyltransferase 1	1	NYLNMNK	NYLNMNK	2	NYLNMNK2	9662.85		8089.23
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	NYLNTLSTALNILEK	NYLNTLSTALNILEK	3	NYLNTLSTALNILEK3	4183.44	2728.85	
Q5HZY2	Q5HZY2	SAR1B_RAT	Sar1b	GTP-binding protein SAR1b	1	NYLPAINGIVFLVDCADHER	NYLPAINGIVFLVDC(UniMod:4)ADHER	3	NYLPAINGIVFLVDC(UniMod:4)ADHER3	21077	28689	39532.1
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	NYLPALK	NYLPALK	2	NYLPALK2	52064.9	69110.5	58597
P21708	P21708	MK03_RAT	Mapk3	Mitogen-activated protein kinase 3	1	NYLQSLPSK	NYLQSLPSK	2	NYLQSLPSK2	29546	24454.9	25584.6
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	NYLSCDVEVR	NYLSC(UniMod:4)DVEVR	2	NYLSC(UniMod:4)DVEVR2	73017.5	68936.2	90663.8
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	NYLSLAPLFFK	NYLSLAPLFFK	2	NYLSLAPLFFK2	41172.9	29903.9	32477.7
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	NYLSPTFK	NYLSPTFK	1	NYLSPTFK1	8009.02	6526.83	13422.3
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	NYLSPTFK	NYLSPTFK	2	NYLSPTFK2	290442	311143	263994
P62815	P62815	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	1	NYLSQPR	NYLSQPR	2	NYLSQPR2	102675		96078
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	NYLTIFR	NYLTIFR	2	NYLTIFR2	189442	203755	215369
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	NYLTNLLK	NYLTNLLK	2	NYLTNLLK2	48249.6	59679.5	44251.6
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	NYMAEGWALPVTHTR	NYMAEGWALPVTHTR	3	NYMAEGWALPVTHTR3	8642.42	15006.3	17069.7
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	NYMDFLDSQTATFIR	NYMDFLDSQTATFIR	2	NYMDFLDSQTATFIR2	2023.85	2780.62	6692.67
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	NYMDYLSR	NYMDYLSR	2	NYMDYLSR2	44775.2	43760.5	39857.5
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	NYMQRPSTEQLLK	NYMQRPSTEQLLK	3	NYMQRPSTEQLLK3	24365.8	42223.5	32095.9
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	NYMSNPSYNYEIVNR	NYMSNPSYNYEIVNR	2	NYMSNPSYNYEIVNR2	100625	93480.1	88114.2
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	NYMSNPSYNYEIVNR	NYMSNPSYNYEIVNR	3	NYMSNPSYNYEIVNR3	49818.7	35396.3	31888.7
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	NYMTPAK	NYMTPAK	2	NYMTPAK2	47001.5	49815.2	42808.3
Q6AYT3	Q6AYT3	RTCB_RAT	Rtcb	RNA-splicing ligase RtcB homolog	1	NYNDELQFLDK	NYNDELQFLDK	2	NYNDELQFLDK2	9132.81	11363.2	10049.3
Q3B7D1	Q3B7D1	UBE2Z_RAT	Ube2z	Ubiquitin-conjugating enzyme E2 Z	1	NYNECIR	NYNEC(UniMod:4)IR	2	NYNEC(UniMod:4)IR2	118033	102533	103266
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	NYNLVEVLK	NYNLVEVLK	2	NYNLVEVLK2	1.31814e+07	1.24585e+07	1.18562e+07
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	NYNLVEVLKSMGITK	NYNLVEVLKSMGITK	3	NYNLVEVLKSMGITK3	1514.56		
F1LNX8	F1LNX8	F1LNX8_RAT	Cmahp	Cytidine monophosphate-N-acetylneuraminic acid hydroxylase	1	NYNLVVR	NYNLVVR	2	NYNLVVR2	6111.78	8407.94	5004.57
Q5FVL6	Q5FVL6	TSN13_RAT	Tspan13	Tetraspanin-13	1	NYNPNDTCPASCAK	NYNPNDTC(UniMod:4)PASC(UniMod:4)AK	2	NYNPNDTC(UniMod:4)PASC(UniMod:4)AK2	6852.07	10778.3	8103.83
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	NYPATFWVNPQFK	NYPATFWVNPQFK	2	NYPATFWVNPQFK2	95905.6	111322	112245
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	NYPATFWVNPQFK	NYPATFWVNPQFK	3	NYPATFWVNPQFK3	10624.5	11993.2	13322.6
P19234	P19234	NDUV2_RAT	Ndufv2	NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial	1	NYPEGHR	NYPEGHR	2	NYPEGHR2			36134.7
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	NYPLPSPAATEGGSLTPVR	NYPLPSPAATEGGSLTPVR	2	NYPLPSPAATEGGSLTPVR2	6500.82	6392.76	4798.74
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	NYPNTFWMNPQYLIK	NYPNTFWMNPQYLIK	2	NYPNTFWMNPQYLIK2	1.58533e+06	1.81574e+06	1.68459e+06
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	NYPNTFWMNPQYLIK	NYPNTFWMNPQYLIK	3	NYPNTFWMNPQYLIK3	58496.1	78736.9	46248.2
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	NYPVWQHITLTTLR	NYPVWQHITLTTLR	2	NYPVWQHITLTTLR2	10237.8	14553.3	3935.04
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	NYPVWQHITLTTLR	NYPVWQHITLTTLR	3	NYPVWQHITLTTLR3	65354.6	60497.3	56754
Q6P7Q1	Q6P7Q1	BABA2_RAT	Babam2	BRISC and BRCA1-A complex member 2	1	NYPYSPR	NYPYSPR	2	NYPYSPR2	58102	41641.1	68181.1
Q99P99	Q99P99	HDAC4_RAT	Hdac4	Histone deacetylase 4	1	NYQASMEAAGIPVSFGSHRPLSR	NYQASMEAAGIPVSFGSHRPLSR	3	NYQASMEAAGIPVSFGSHRPLSR3	2530.38	2928.14	
Q99P99	Q99P99	HDAC4_RAT	Hdac4	Histone deacetylase 4	1	NYQASMEAAGIPVSFGSHRPLSR	NYQASMEAAGIPVSFGSHRPLSR	4	NYQASMEAAGIPVSFGSHRPLSR4	18068	10962.8	21917.9
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	NYQEALR	NYQEALR	2	NYQEALR2	14401.2	12044.7	
D4ADT5	D4ADT5	D4ADT5_RAT	Rig1	RNA helicase	1	NYQLELALPAK	NYQLELALPAK	2	NYQLELALPAK2	4125.03	4186.89	2632.16
P62961	A0A8I6GL75;P62961;D3ZEV0	YBOX1_RAT	Ybx1	Y-box-binding protein 1	0	NYQQNYQNSESGEK	NYQQNYQNSESGEK	2	NYQQNYQNSESGEK2	2618.9	6719.48	3234.17
Q04631	Q04631	FNTA_RAT	Fnta	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha	1	NYQVWHHR	NYQVWHHR	3	NYQVWHHR3	5079.02	7963.46	3346.24
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	NYQVWTSLLDWLKPNSQLAVQGVSR	NYQVWTSLLDWLKPNSQLAVQGVSR	3	NYQVWTSLLDWLKPNSQLAVQGVSR3	80050.7	66685.6	63712.7
Q32Q06	Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	1	NYRGDVDMSEVEHFMPILMEK	NYRGDVDMSEVEHFMPILMEK	4	NYRGDVDMSEVEHFMPILMEK4	3157.02		1397.88
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	NYSESFFEAASMMSQLSHK	NYSESFFEAASMMSQLSHK	3	NYSESFFEAASMMSQLSHK3	8054.07	10436.6	18834.1
O89035	O89035	DIC_RAT	Slc25a10	Mitochondrial dicarboxylate carrier	1	NYSHALDGLYR	NYSHALDGLYR	3	NYSHALDGLYR3	14312.6	12417.1	12284.3
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	NYSLIDK	NYSLIDK	2	NYSLIDK2	42154.7	40356.4	44957.8
Q6AYK6	Q6AYK6	CYBP_RAT	Cacybp	Calcyclin-binding protein	1	NYSMIVNNLLKPISVESSSK	NYSMIVNNLLKPISVESSSK	3	NYSMIVNNLLKPISVESSSK3	91542.1	62429.6	61015
Q5U1Z9	Q5U1Z9	Q5U1Z9_RAT	Mtx2	Metaxin 2	1	NYSNLLAFCR	NYSNLLAFC(UniMod:4)R	2	NYSNLLAFC(UniMod:4)R2	10394.1	12138.8	10387.3
P48004	P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	1	NYTDDAIETDDLTIK	NYTDDAIETDDLTIK	2	NYTDDAIETDDLTIK2	1.16194e+06	1.07778e+06	1.27778e+06
P48004	P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	1	NYTDDAIETDDLTIK	NYTDDAIETDDLTIK	3	NYTDDAIETDDLTIK3		57777.6	53786.7
P48004	P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	1	NYTDDAIETDDLTIKLVIKALLEVVQSGGK	NYTDDAIETDDLTIKLVIKALLEVVQSGGK	4	NYTDDAIETDDLTIKLVIKALLEVVQSGGK4		8018.21	1955.8
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	NYTDNELEK	NYTDNELEK	2	NYTDNELEK2	264768	271589	255496
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	NYTDVYDK	NYTDVYDK	2	NYTDVYDK2	51628.4	37045.6	42847.1
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	NYTDVYDKNNLLTNK	NYTDVYDKNNLLTNK	3	NYTDVYDKNNLLTNK3	17974.8	21459.6	12005.1
A0A8I6AN39	A0A8I6AN39	A0A8I6AN39_RAT	Eefsec	Eukaryotic elongation factor, selenocysteine-tRNA-specific	1	NYTESFLPALR	NYTESFLPALR	2	NYTESFLPALR2	3368.56	3672.69	
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	NYTGTPPPALHEGPPLHIQAGDTVELLR	NYTGTPPPALHEGPPLHIQAGDTVELLR	4	NYTGTPPPALHEGPPLHIQAGDTVELLR4	24043.8	39481.8	23687.5
Q63621	Q63621	IL1AP_RAT	Il1rap	Interleukin-1 receptor accessory protein	1	NYVCHAR	NYVC(UniMod:4)HAR	2	NYVC(UniMod:4)HAR2			11709.6
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	NYVDQYSEVAVQMMMHMQPK	NYVDQYSEVAVQMMMHMQPK	3	NYVDQYSEVAVQMMMHMQPK3	19540	22587.2	21526.4
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	NYVDWILK	NYVDWILK	2	NYVDWILK2	1.09418e+07	1.27609e+07	1.29724e+07
Q5FVJ0	A0A0G2K4D6;Q5FVJ0;F1LR42	RUFY3_RAT	Rufy3	Protein RUFY3	0	NYVEELNR	NYVEELNR	2	NYVEELNR2	33453.9	22589.4	39954.5
A0A0G2JU49	A0A0G2JU49	A0A0G2JU49_RAT	Mtx1	Metaxin 1	1	NYVEVTR	NYVEVTR	2	NYVEVTR2	73122.4	60612.8	70948.7
A0A0G2JU49	A0A0G2JU49	A0A0G2JU49_RAT	Mtx1	Metaxin 1	1	NYVEVTRK	NYVEVTRK	2	NYVEVTRK2	6599.32	4872.62	
A0A0G2JWA3	A0A0G2JWA3	A0A0G2JWA3_RAT	Xpo7	Exportin 7	1	NYVLNYLATRPK	NYVLNYLATRPK	3	NYVLNYLATRPK3	5657.63	3200.9	
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	NYVLQTLGTETYR	NYVLQTLGTETYR	2	NYVLQTLGTETYR2	8333.3		8098.81
D3ZXF9	D3ZXF9	D3ZXF9_RAT	Mrpl12	Mitochondrial ribosomal protein L12	1	NYVQGINLVQAK	NYVQGINLVQAK	2	NYVQGINLVQAK2	40317.4	38297.9	33764.4
P62994	P62994	GRB2_RAT	Grb2	Growth factor receptor-bound protein 2	1	NYVTPVNR	NYVTPVNR	2	NYVTPVNR2	151664	139071	154822
G3V6K6	G3V6K6	G3V6K6_RAT	Egfr	Receptor protein-tyrosine kinase	1	NYVVTDHGSCVR	NYVVTDHGSC(UniMod:4)VR	2	NYVVTDHGSC(UniMod:4)VR2	3156.1		
G3V6K6	G3V6K6	G3V6K6_RAT	Egfr	Receptor protein-tyrosine kinase	1	NYVVTDHGSCVR	NYVVTDHGSC(UniMod:4)VR	3	NYVVTDHGSC(UniMod:4)VR3	38425.6	24066.1	22196.9
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	NYVVVLSDGPALHPTHTPQISYTGPSASGR	NYVVVLSDGPALHPTHTPQISYTGPSASGR	4	NYVVVLSDGPALHPTHTPQISYTGPSASGR4	125305	127407	108887
Q9JL55	Q9JL55	GDE1_RAT	Gde1	Glycerophosphodiester phosphodiesterase 1	1	NYYESHLGSSYITDSMLEDCAPHF	NYYESHLGSSYITDSMLEDC(UniMod:4)APHF	3	NYYESHLGSSYITDSMLEDC(UniMod:4)APHF3	7163.62	8894.24	4276.83
A0A0G2JTM9	A0A0G2JTM9	A0A0G2JTM9_RAT	Dnajb14	DnaJ heat shock protein family (Hsp40) member B14	1	NYYEVLGVTK	NYYEVLGVTK	2	NYYEVLGVTK2	7219.64	9000.43	12662.8
A0A8I5YC59	A0A8I5YC59	A0A8I5YC59_RAT	Pcdh10	Protocadherin 10	1	NYYTIVTEAPLDR	NYYTIVTEAPLDR	2	NYYTIVTEAPLDR2	3758.08		
P20069	P20069	MPPA_RAT	Pmpca	Mitochondrial-processing peptidase subunit alpha	1	NYYTPDR	NYYTPDR	2	NYYTPDR2	26781.5	28169.7	32100.2
Q6P756	Q6P756	NECP2_RAT	Necap2	Adaptin ear-binding coat-associated protein 2	1	PAAAATADIWGDFTK	PAAAATADIWGDFTK	2	PAAAATADIWGDFTK2		3199.53	
Q9EQ60	Q9EQ60	CAC1H_RAT	Cacna1h	Voltage-dependent T-type calcium channel subunit alpha-1H	1	PAALLPTKFHDCNGQMVALPSEFFLR	PAALLPTKFHDC(UniMod:4)NGQMVALPSEFFLR	4	PAALLPTKFHDC(UniMod:4)NGQMVALPSEFFLR4		3115.21	
Q9ES58	Q9ES58	MO2R1_RAT	Cd200r1	Cell surface glycoprotein CD200 receptor 1	1	PAAQISWTPDGDCVAK	PAAQISWTPDGDC(UniMod:4)VAK	2	PAAQISWTPDGDC(UniMod:4)VAK2	11127.1	12270.6	5929.83
B0BN30	B0BN30	B0BN30_RAT	Mtch1	Mitochondrial carrier 1	1	PAAQPSAR	PAAQPSAR	2	PAAQPSAR2			33484.1
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	PAASDLPVPAEGVR	PAASDLPVPAEGVR	2	PAASDLPVPAEGVR2	75325.2	54180.1	58310.7
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	PAAVAAENEEIGAHIK	PAAVAAENEEIGAHIK	2	PAAVAAENEEIGAHIK2	38922.7	36304.1	38652.3
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	PAAVAAENEEIGAHIK	PAAVAAENEEIGAHIK	3	PAAVAAENEEIGAHIK3	206274	187535	210604
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	PAAVVLQTK	PAAVVLQTK	2	PAAVVLQTK2	888070	844397	769568
F7F288	F7F288	F7F288_RAT	Bcap29	B-cell receptor-associated protein	1	PAAYEQAQMR	PAAYEQAQMR	2	PAAYEQAQMR2	94304.6	83714.5	77818.5
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	PACGGDKPGVR	PAC(UniMod:4)GGDKPGVR	2	PAC(UniMod:4)GGDKPGVR2			10507.2
D3ZYS7	D3ZYS7;F1M2M6	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	0	PADAVYGQK	PADAVYGQK	2	PADAVYGQK2	2715.58	3692.01	4154.94
P85845	P85845	FSCN1_RAT	Fscn1	Fascin	1	PADEIAVDR	PADEIAVDR	2	PADEIAVDR2	5095.34		
Q4KM98	Q4KM98	MFF_RAT	Mff	Mitochondrial fission factor	1	PADLDLIQSTPFKPLALK	PADLDLIQSTPFKPLALK	3	PADLDLIQSTPFKPLALK3	10000.8	13417.1	10974.3
Q9WTQ2	Q9WTQ2	PODXL_RAT	Podxl	Podocalyxin	1	PAEDSCALELAPILDNQAVAVK	PAEDSC(UniMod:4)ALELAPILDNQAVAVK	3	PAEDSC(UniMod:4)ALELAPILDNQAVAVK3	18043.9	13796.5	17409.8
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	PAEFTVDAK	PAEFTVDAK	2	PAEFTVDAK2	23804.4	14535.2	16003.9
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	PAEIDSLWEISK	PAEIDSLWEISK	2	PAEIDSLWEISK2	11135.2	10080	7358.8
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	PAEMGDYPWQVAIK	PAEMGDYPWQVAIK	2	PAEMGDYPWQVAIK2	35054.5	30828.6	33363.5
P15473	P15473	IBP3_RAT	Igfbp3	Insulin-like growth factor-binding protein 3	1	PAEQYPLK	PAEQYPLK	2	PAEQYPLK2	56038.7	38665.5	68482.3
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	PAETLKPIANAQPSGSPKPIANAQPIETQK	PAETLKPIANAQPSGSPKPIANAQPIETQK	4	PAETLKPIANAQPSGSPKPIANAQPIETQK4	6449.69		4291.59
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	PAETLKPVGNAK	PAETLKPVGNAK	3	PAETLKPVGNAK3	36067.8	38358.6	27252
Q6IRJ7	Q6IRJ7	Q6IRJ7_RAT	Anxa7	Annexin	1	PAFFAER	PAFFAER	2	PAFFAER2	34773.3		41750.8
Q9Z1P2	Q9QXQ0;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	PAFMPSEGR	PAFMPSEGR	2	PAFMPSEGR2	98810	90618.1	88065.8
Q5XI07	Q5XI07	LPP_RAT	Lpp	Lipoma-preferred partner homolog	1	PAFNVQVK	PAFNVQVK	2	PAFNVQVK2	20622.8	20383.3	22180.2
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	PAFSNALEPDFK	PAFSNALEPDFK	2	PAFSNALEPDFK2	20004.7	20297	17780
Q9Z2P5	Q9Z2P5	RIPK3_RAT	Ripk3	Receptor-interacting serine/threonine-protein kinase 3	1	PAFTETPGPDPQR	PAFTETPGPDPQR	2	PAFTETPGPDPQR2	5960.19	4911.46	6278.25
B1H219	B1H219	B1H219_RAT	Dkk3	Dickkopf WNT signaling pathway inhibitor 3	1	PAFVGSHDHNEESQLPR	PAFVGSHDHNEESQLPR	3	PAFVGSHDHNEESQLPR3	340629	279618	265133
B1H219	B1H219	B1H219_RAT	Dkk3	Dickkopf WNT signaling pathway inhibitor 3	1	PAFVGSHDHNEESQLPR	PAFVGSHDHNEESQLPR	4	PAFVGSHDHNEESQLPR4	1.24706e+06	1.18279e+06	1.20168e+06
P15978	Q6MFZ4;M0R4E9;Q6MFZ3;Q6W9J5;A0A0G2KA93;Q6MG00;A0A8I6ADU9;A0A8J8YPS9;A0A0G2K881;D3ZKI0;P16391;Q4G002;Q6MFY3;E9PTZ7;A0A8I5ZYQ2;A0A0G2K1E1;A0A0G2K4S5;A0A8I6AK64;A0A8I6AL14;A0A8J8XQ64;A0A8J8XB15;F1LQF2;P15978;A0A8J8Y6P7;A0A8I6ASE5	HA11_RAT	RT1-Aw2	Class I histocompatibility antigen, Non-RT1.A alpha-1 chain	0	PAGDGTFQK	PAGDGTFQK	2	PAGDGTFQK2	26314.3	16378.9	26124.9
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	PAGGPKPPSGK	PAGGPKPPSGK	2	PAGGPKPPSGK2			11174.2
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	PAGSVFTTNAYAVVSHHNQNPEFYDEIK	PAGSVFTTNAYAVVSHHNQNPEFYDEIK	4	PAGSVFTTNAYAVVSHHNQNPEFYDEIK4	7164.31	3389.14	3910.66
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	PAGTAAMR	PAGTAAMR	2	PAGTAAMR2	70606.9	39356.8	22718.1
P23377	P23377	FURIN_RAT	Furin	Furin	1	PAHLNANDWATNGVGR	PAHLNANDWATNGVGR	3	PAHLNANDWATNGVGR3	2184.05		5806.48
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	PAIMTMLADHAAR	PAIMTMLADHAAR	3	PAIMTMLADHAAR3	6660.68	3806.48	
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	PAINVGLSVSR	PAINVGLSVSR	2	PAINVGLSVSR2	27021.5		21290.7
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	PAIPPVASSTDMLHSK	PAIPPVASSTDMLHSK	3	PAIPPVASSTDMLHSK3	90066.7	83595.7	115878
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	PAIQILHNTGLR	PAIQILHNTGLR	3	PAIQILHNTGLR3	44258	47774.4	35715.5
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	PAISYPYIYSLASSIVEK	PAISYPYIYSLASSIVEK	3	PAISYPYIYSLASSIVEK3	8048.31	3727.39	3715.86
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	PAKPDPNLYEALDGGK	PAKPDPNLYEALDGGK	3	PAKPDPNLYEALDGGK3	16032.6	12370.3	14002.3
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	PAKPPGLK	PAKPPGLK	2	PAKPPGLK2	7671.09		4259.48
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	PALAPKPASQTPPSSPLSK	PALAPKPASQTPPSSPLSK	3	PALAPKPASQTPPSSPLSK3	64206	49141.4	54458.7
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	PALDDLGQGLMPVLEAWK	PALDDLGQGLMPVLEAWK	2	PALDDLGQGLMPVLEAWK2	267110	214303	267761
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	PALDDLGQGLMPVLEAWK	PALDDLGQGLMPVLEAWK	3	PALDDLGQGLMPVLEAWK3	77212.9	55633.5	63337.3
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	PALDDLGQGLMPVLEAWK	PALDDLGQGLMPVLEAWK	4	PALDDLGQGLMPVLEAWK4	11142.4	14658.5	8571.49
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	PALDSELLTCHSAEYVER	PALDSELLTC(UniMod:4)HSAEYVER	3	PALDSELLTC(UniMod:4)HSAEYVER3	2214.22	3845.67	7219.71
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	PALELLEPIEQK	PALELLEPIEQK	2	PALELLEPIEQK2	1156.78	2492.98	1484.24
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	PALESGDGEQVPEQK	PALESGDGEQVPEQK	2	PALESGDGEQVPEQK2	214031	228744	202352
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	PALESGDGEQVPEQK	PALESGDGEQVPEQK	3	PALESGDGEQVPEQK3	58435.8	65434	54579
P61954	P61954	GBG11_RAT	Gng11	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11	1	PALHIEDLPEK	PALHIEDLPEK	3	PALHIEDLPEK3	29029.5	25482.3	19133.9
P61954	P61954	GBG11_RAT	Gng11	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11	1	PALHIEDLPEKEK	PALHIEDLPEKEK	2	PALHIEDLPEKEK2	23732	20083.4	
P61954	P61954	GBG11_RAT	Gng11	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11	1	PALHIEDLPEKEK	PALHIEDLPEKEK	3	PALHIEDLPEKEK3	97338.4	91236.5	89657.1
P61954	P61954	GBG11_RAT	Gng11	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11	1	PALHIEDLPEKEK	PALHIEDLPEKEK	4	PALHIEDLPEKEK4	332862	367490	358151
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	PALLHLVHDFTK	PALLHLVHDFTK	3	PALLHLVHDFTK3	7147.03	8977.74	3355.38
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	PALLHSTFFPALQGAQTK	PALLHSTFFPALQGAQTK	3	PALLHSTFFPALQGAQTK3	61052.6	40284.8	40884.6
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	PALPFILR	PALPFILR	2	PALPFILR2	103887	115725	106253
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	PALPGWK	PALPGWK	2	PALPGWK2	98528.6	76217.2	94569.6
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	PALPLDQLQITHK	PALPLDQLQITHK	3	PALPLDQLQITHK3	4770.69		6652.93
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	PALPLDQLQITHKDPK	PALPLDQLQITHKDPK	3	PALPLDQLQITHKDPK3	4023.88	3705.43	5807.08
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	PALPLDQLQITHKDPK	PALPLDQLQITHKDPK	4	PALPLDQLQITHKDPK4	21096.7	20072.4	17161.5
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	PALSPFEFQK	PALSPFEFQK	2	PALSPFEFQK2	7507.49	5342.74	6467.51
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	PALVVLTEK	PALVVLTEK	2	PALVVLTEK2	25142	30458.4	23296.4
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	PAMAATSFVLMTTFPNK	PAMAATSFVLMTTFPNK	3	PAMAATSFVLMTTFPNK3	12126.4	14124.1	12437.5
P36506	P36506	MP2K2_RAT	Map2k2	Dual specificity mitogen-activated protein kinase kinase 2	1	PAMAIFELLDYIVNEPPPK	PAMAIFELLDYIVNEPPPK	3	PAMAIFELLDYIVNEPPPK3			7487.04
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	PAMLDNEADGSK	PAMLDNEADGSK	2	PAMLDNEADGSK2	3272.96	3533.75	837.897
Q6TMG5	Q6TMG5	NEMO_RAT	Ikbkg	NF-kappa-B essential modulator	1	PAMLHLPSEQGTPETLQR	PAMLHLPSEQGTPETLQR	3	PAMLHLPSEQGTPETLQR3		7908.96	
P01026	P01026	CO3_RAT	C3	Complement C3	1	PAMPFDLMVFVTNPDGSPAR	PAMPFDLMVFVTNPDGSPAR	3	PAMPFDLMVFVTNPDGSPAR3	213064	162043	142957
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	PAMPQDSVPSPR	PAMPQDSVPSPR	2	PAMPQDSVPSPR2	5658.69	3878.5	2766.07
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	PAMVPGWNHGNITR	PAMVPGWNHGNITR	3	PAMVPGWNHGNITR3	64906.5	75800.4	67010.9
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	PANISGSTSSQR	PANISGSTSSQR	2	PANISGSTSSQR2	15662.2	33131.8	22009
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	PANPLGIEIEK	PANPLGIEIEK	2	PANPLGIEIEK2	7153.4	8484.34	8947.97
P67874	P67874	CSK2B_RAT	Csnk2b	Casein kinase II subunit beta	1	PANQFVPR	PANQFVPR	2	PANQFVPR2	5983.88	4661.22	
D3ZHW0	D3ZHW0	D3ZHW0_RAT	Dhx29	ATP-dependent RNA helicase DHX29	1	PAPAVPTSAR	PAPAVPTSAR	2	PAPAVPTSAR2	20392.8	24066.9	13498
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	PAPEAAGESQQQLEIETR	PAPEAAGESQQQLEIETR	2	PAPEAAGESQQQLEIETR2	1821.21		
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	PAPEAAGESQQQLEIETR	PAPEAAGESQQQLEIETR	3	PAPEAAGESQQQLEIETR3	10975.8	9537.42	12613
Q6P4Z9	Q6P4Z9	CSN8_RAT	Cops8	COP9 signalosome complex subunit 8	1	PAPGALDVSLNR	PAPGALDVSLNR	2	PAPGALDVSLNR2	14791.9	12199.4	14647.3
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	PAPLLESPFK	PAPLLESPFK	2	PAPLLESPFK2	36179.5	39426.8	31474.6
Q63433	Q63433	PKN1_RAT	Pkn1	Serine/threonine-protein kinase N1	1	PAPLTGTLEVR	PAPLTGTLEVR	2	PAPLTGTLEVR2	24424.2	19337.6	18413.7
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	PAPPPISGGGYR	PAPPPISGGGYR	2	PAPPPISGGGYR2	6.81223e+06	5.20665e+06	5.49051e+06
Q80Z70	Q80Z70	SE1L1_RAT	Sel1l	Protein sel-1 homolog 1	1	PAPPQQEGPPEQQPPQ	PAPPQQEGPPEQQPPQ	2	PAPPQQEGPPEQQPPQ2	19156	13416.2	8724.37
Q80Z70	Q80Z70	SE1L1_RAT	Sel1l	Protein sel-1 homolog 1	1	PAPPQQEGPPEQQPPQ	PAPPQQEGPPEQQPPQ	3	PAPPQQEGPPEQQPPQ3	16679.4	12239.3	4971.55
P70473	P70473	AMACR_RAT	Amacr	Alpha-methylacyl-CoA racemase	1	PAPQLSR	PAPQLSR	2	PAPQLSR2		15133.8	22036.4
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	PAPSAQPAPPPHPPSR	PAPSAQPAPPPHPPSR	3	PAPSAQPAPPPHPPSR3	2946.79	2152.13	
O35854	O35854	BCAT2_RAT	Bcat2	Branched-chain-amino-acid aminotransferase, mitochondrial	1	PAPSQPLLFGK	PAPSQPLLFGK	2	PAPSQPLLFGK2	9080.15	8845.77	11019.9
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	PAPTPWGSK	PAPTPWGSK	2	PAPTPWGSK2	85631.2	56069.2	57841.5
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	PAPVGTAPLPPWK	PAPVGTAPLPPWK	2	PAPVGTAPLPPWK2	163756	147644	157664
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	PAPVGTAPLPPWK	PAPVGTAPLPPWK	3	PAPVGTAPLPPWK3		11498	8432.9
O08628	O08628	PCOC1_RAT	Pcolce	Procollagen C-endopeptidase enhancer 1	1	PAPVVAPGNQVTLR	PAPVVAPGNQVTLR	2	PAPVVAPGNQVTLR2	15647.3	8954.99	6488.66
Q9Z0V5	Q9Z0V5	PRDX4_RAT	Prdx4	Peroxiredoxin-4	1	PAPYWEGTAVINGEFK	PAPYWEGTAVINGEFK	2	PAPYWEGTAVINGEFK2	1169.03		
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PAQGVVTTLENVSPPR	PAQGVVTTLENVSPPR	2	PAQGVVTTLENVSPPR2	1.07903e+07	9.84885e+06	8.95438e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PAQGVVTTLENVSPPR	PAQGVVTTLENVSPPR	3	PAQGVVTTLENVSPPR3	1.74635e+07	1.66628e+07	1.64784e+07
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PAQGVVTTLENVSPPR	PAQGVVTTLENVSPPR	4	PAQGVVTTLENVSPPR4	66802.9	63010.1	68901.2
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PAQGVVTTLENVSPPRR	PAQGVVTTLENVSPPRR	2	PAQGVVTTLENVSPPRR2	16512.4	18059.3	10196.9
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PAQGVVTTLENVSPPRR	PAQGVVTTLENVSPPRR	3	PAQGVVTTLENVSPPRR3	1.45757e+07	1.69873e+07	1.62035e+07
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PAQGVVTTLENVSPPRR	PAQGVVTTLENVSPPRR	4	PAQGVVTTLENVSPPRR4	2.93943e+06	3.86028e+06	3.49304e+06
A0A0G2K069	A0A0G2K069	A0A0G2K069_RAT	Col11a2	Collagen type XI alpha 2 chain	1	PAQLSAPTR	PAQLSAPTR	2	PAQLSAPTR2	9913.5	5868.64	8435.7
A0A8I6G6W8	A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	1	PAQVSQPFR	PAQVSQPFR	2	PAQVSQPFR2	5256.49	6094.37	6016.63
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	PARPNLSGSSAGSHLSGLGGEGPGETEK	PARPNLSGSSAGSHLSGLGGEGPGETEK	3	PARPNLSGSSAGSHLSGLGGEGPGETEK3	4746.6	8809.97	7071.63
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	PARPNLSGSSAGSHLSGLGGEGPGETEK	PARPNLSGSSAGSHLSGLGGEGPGETEK	4	PARPNLSGSSAGSHLSGLGGEGPGETEK4	174951	164131	175869
F7EUW3	F7EUW3	F7EUW3_RAT	C2cd2l	C2CD2-like	1	PASAAEPGGSLR	PASAAEPGGSLR	2	PASAAEPGGSLR2	6979.08	5106	3812.21
Q6J2U6	Q6J2U6	RN114_RAT	Rnf114	E3 ubiquitin-protein ligase RNF114	1	PASETDPLSR	PASETDPLSR	2	PASETDPLSR2	1402.31		
A0A8I6A1D9	A0A8I6A1D9	A0A8I6A1D9_RAT	Use1	Vesicle transport protein USE1	1	PASEVISEYSR	PASEVISEYSR	2	PASEVISEYSR2	4243.36	2841.85	3319.32
P41123	D3ZD02;F1M2E9;A0A8I5ZNK4;P41123	RL13_RAT	Rpl13	Large ribosomal subunit protein eL13	0	PASGPIRPIVR	PASGPIRPIVR	3	PASGPIRPIVR3	71127.6	68589	66886.9
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	PASGTDK	PASGTDK	1	PASGTDK1			38001.6
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	PASLDLDSR	PASLDLDSR	2	PASLDLDSR2	18299.6	16173.9	18027.6
Q5FVH0	Q5FVH0	C1QT5_RAT	C1qtnf5	Complement C1q tumor necrosis factor-related protein 5	1	PASLSGGAMVR	PASLSGGAMVR	2	PASLSGGAMVR2	11472.5	4172.56	5556.86
Q6IRJ7	A0A8I6G4Q5;Q6IRJ7	Q6IRJ7_RAT	Anxa7	Annexin	0	PASNFDAMR	PASNFDAMR	2	PASNFDAMR2	40795.8	24391.7	29915.1
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	PASNMVIADVK	PASNMVIADVK	2	PASNMVIADVK2	5.41428e+07	142639	137145
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	PASNMVIADVK	PASNMVIADVK	3	PASNMVIADVK3	296818	264979	247942
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	PASNMVIADVKMLSGFIPLKPTVK	PASNMVIADVKMLSGFIPLKPTVK	3	PASNMVIADVKMLSGFIPLKPTVK3	4037.4		
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	PASNMVIADVKMLSGFIPLKPTVK	PASNMVIADVKMLSGFIPLKPTVK	4	PASNMVIADVKMLSGFIPLKPTVK4	30020.4	18624	24710.7
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	PASPATETVPAFSER	PASPATETVPAFSER	2	PASPATETVPAFSER2	4725.23	6348.38	1477.4
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	PASQTPPSSPLSK	PASQTPPSSPLSK	2	PASQTPPSSPLSK2	78478.5	31097.1	77769
A0A8I6GKH8	A0A8I6GKH8	A0A8I6GKH8_RAT	Map7	Microtubule-associated protein 7	1	PASSLTPGPVR	PASSLTPGPVR	2	PASSLTPGPVR2	8120.83	11323	6285.2
Q2LC84	Q2LC84	NUMB_RAT	Numb	Protein numb homolog	1	PASTALAPVAMPVR	PASTALAPVAMPVR	2	PASTALAPVAMPVR2	12253.7	4054.83	6504.28
Q2LC84	Q2LC84	NUMB_RAT	Numb	Protein numb homolog	1	PASTALAPVAMPVR	PASTALAPVAMPVR	3	PASTALAPVAMPVR3	1404.09		
Q6I7R3	Q6I7R3	ISOC1_RAT	Isoc1	Isochorismatase domain-containing protein 1	1	PASVPHGAGYDVLIQK	PASVPHGAGYDVLIQK	3	PASVPHGAGYDVLIQK3	1922.99	3037.41	
A0A8I5ZXB9	A0A8I5ZXB9	A0A8I5ZXB9_RAT	Kifap3	Kinesin-associated protein 3	1	PATAYGFRPDEPYYYSFGSR	PATAYGFRPDEPYYYSFGSR	3	PATAYGFRPDEPYYYSFGSR3	29025.8	30904.8	22481.1
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	PATEQLMK	PATEQLMK	2	PATEQLMK2	100308	86065.2	60795.2
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	PATFTVNTK	PATFTVNTK	2	PATFTVNTK2	92019.4	89936	92799.1
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	PATGISQPPTTPTGQATR	PATGISQPPTTPTGQATR	2	PATGISQPPTTPTGQATR2	15314.6	9137.53	11601.5
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	PATITDNVIPACLPSPNYVVADR	PATITDNVIPAC(UniMod:4)LPSPNYVVADR	3	PATITDNVIPAC(UniMod:4)LPSPNYVVADR3	313098	249737	250382
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	PATLTVANFFK	PATLTVANFFK	2	PATLTVANFFK2	23214.7	23829.7	19444.5
M0RA86	M0RA86	M0RA86_RAT	Ccdc9	Coiled-coil domain containing 9	1	PATTLDLK	PATTLDLK	1	PATTLDLK1		1052.49	
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	PATTSAQQPLEPPLWR	PATTSAQQPLEPPLWR	2	PATTSAQQPLEPPLWR2	13882.2	13616.1	4964.28
P38918	P38918	ARK73_RAT	Akr7a3	Aflatoxin B1 aldehyde reductase member 3	1	PATVLGAMEMGR	PATVLGAMEMGR	2	PATVLGAMEMGR2	3842.7	9857.25	8125.44
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	PAVDNIR	PAVDNIR	2	PAVDNIR2	69488.3	76964.8	71153
Q9WVS2	Q9WVS2	OSGEP_RAT	Osgep	tRNA N6-adenosine threonylcarbamoyltransferase	1	PAVLGFEGSANK	PAVLGFEGSANK	2	PAVLGFEGSANK2	12836.5	8163.58	6299.69
P51635	P51635	AK1A1_RAT	Akr1a1	Aldo-keto reductase family 1 member A1	1	PAVLQVECHPYLAQNELIAHCQAR	PAVLQVEC(UniMod:4)HPYLAQNELIAHC(UniMod:4)QAR	4	PAVLQVEC(UniMod:4)HPYLAQNELIAHC(UniMod:4)QAR4	12270.5	4408.72	2291.75
A0A8I6G6W8	A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	PAVLSGYFK	PAVLSGYFK	2	PAVLSGYFK2	40459.1	27246.5	20988.6
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	PAVPLLNSNSEK	PAVPLLNSNSEK	2	PAVPLLNSNSEK2	64267.9	58596	53982.8
Q3MIE4	Q3MIE4	VAT1_RAT	Vat1	Synaptic vesicle membrane protein VAT-1 homolog	1	PAVPPAPGPGQVTLR	PAVPPAPGPGQVTLR	2	PAVPPAPGPGQVTLR2	51259.9	58094	31099.7
Q3MIE4	Q3MIE4	VAT1_RAT	Vat1	Synaptic vesicle membrane protein VAT-1 homolog	1	PAVPPAPGPGQVTLR	PAVPPAPGPGQVTLR	3	PAVPPAPGPGQVTLR3	9055.68	7154.84	7534.77
P60192	P60192	SNAPN_RAT	Snapin	SNARE-associated protein Snapin	1	PAVQQLDSHVHAVR	PAVQQLDSHVHAVR	4	PAVQQLDSHVHAVR4	3933.31	2137.61	
P47816	P47816	PDCD2_RAT	Pdcd2	Programmed cell death protein 2	1	PAWLALAELPGPGALACAR	PAWLALAELPGPGALAC(UniMod:4)AR	2	PAWLALAELPGPGALAC(UniMod:4)AR2	5377.48	5754.38	
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	PAYAVHGNMLHYVK	PAYAVHGNMLHYVK	4	PAYAVHGNMLHYVK4	1868.48		2762.58
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	PAYFQRPENALK	PAYFQRPENALK	3	PAYFQRPENALK3	170166	178467	167037
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	PAYFQRPENALKR	PAYFQRPENALKR	4	PAYFQRPENALKR4	11977.3	20514.4	12086.9
B2GV73	B2GV73	B2GV73_RAT	Arpc3	Actin-related protein 2/3 complex subunit 3	1	PAYHSSLMDPDTK	PAYHSSLMDPDTK	2	PAYHSSLMDPDTK2	78677.8	60309.5	82563.2
B2GV73	B2GV73	B2GV73_RAT	Arpc3	Actin-related protein 2/3 complex subunit 3	1	PAYHSSLMDPDTK	PAYHSSLMDPDTK	3	PAYHSSLMDPDTK3	619319	646203	648857
D4A4P4	D4A4P4	D4A4P4_RAT	Flad1	FAD synthase	1	PAYLLENEDEER	PAYLLENEDEER	2	PAYLLENEDEER2	2081.03	1663.28	
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	PCCAVDPIENEEDRK	PC(UniMod:4)C(UniMod:4)AVDPIENEEDRK	3	PC(UniMod:4)C(UniMod:4)AVDPIENEEDRK3	12325.2	11704.3	15387.3
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	PCCAVDPIENEEDRKK	PC(UniMod:4)C(UniMod:4)AVDPIENEEDRKK	4	PC(UniMod:4)C(UniMod:4)AVDPIENEEDRKK4	14933.5	14112.7	16607.5
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	PCDLHCTTVDGQR	PC(UniMod:4)DLHC(UniMod:4)TTVDGQR	3	PC(UniMod:4)DLHC(UniMod:4)TTVDGQR3	14127.6	25159.9	13059.7
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	PCEFPQIK	PC(UniMod:4)EFPQIK	2	PC(UniMod:4)EFPQIK2	9316.4		5935.58
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	PCEGEAR	PC(UniMod:4)EGEAR	1	PC(UniMod:4)EGEAR1			12808.1
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	PCEGEAR	PC(UniMod:4)EGEAR	2	PC(UniMod:4)EGEAR2			71794.4
P02770	P02770	ALBU_RAT	Alb	Albumin	1	PCFSALTVDETYVPK	PC(UniMod:4)FSALTVDETYVPK	2	PC(UniMod:4)FSALTVDETYVPK2	5706.73	13721.7	11031.3
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	PCLHGGICNPTHSGFECTCR	PC(UniMod:4)LHGGIC(UniMod:4)NPTHSGFEC(UniMod:4)TC(UniMod:4)R	4	PC(UniMod:4)LHGGIC(UniMod:4)NPTHSGFEC(UniMod:4)TC(UniMod:4)R4	3924.83	1994.6	799.715
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	PCNHVLSLSFPIR	PC(UniMod:4)NHVLSLSFPIR	3	PC(UniMod:4)NHVLSLSFPIR3	8881.95	3615.63	2323.47
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	PCPCPYIDASQR	PC(UniMod:4)PC(UniMod:4)PYIDASQR	2	PC(UniMod:4)PC(UniMod:4)PYIDASQR2	10318.2	12709.4	8159.67
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	PCQCNDNIDPNAVGNCNR	PC(UniMod:4)QC(UniMod:4)NDNIDPNAVGNC(UniMod:4)NR	3	PC(UniMod:4)QC(UniMod:4)NDNIDPNAVGNC(UniMod:4)NR3	1117.13	2026.88	1788.05
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	PCQPCHCDPAGSLSEVCIKDEK	PC(UniMod:4)QPC(UniMod:4)HC(UniMod:4)DPAGSLSEVC(UniMod:4)IKDEK	4	PC(UniMod:4)QPC(UniMod:4)HC(UniMod:4)DPAGSLSEVC(UniMod:4)IKDEK4	8372.97	3336.74	5620.9
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	PCSASGPADAR	PC(UniMod:4)SASGPADAR	2	PC(UniMod:4)SASGPADAR2	200891		105706
Q4AEG0	Q4AEG0	Q4AEG0_RAT	Gp9	Glycoprotein 9	1	PCTCQSLETMGLK	PC(UniMod:4)TC(UniMod:4)QSLETMGLK	2	PC(UniMod:4)TC(UniMod:4)QSLETMGLK2	107208	101917	99031.4
P08721	P08721	OSTP_RAT	Spp1	Osteopontin	1	PDAIDSAER	PDAIDSAER	2	PDAIDSAER2	24812.6	22500.6	26149.5
P55053	P55053	FABP5_RAT	Fabp5	Fatty acid-binding protein 5	1	PDCIITLDGNNLTVK	PDC(UniMod:4)IITLDGNNLTVK	2	PDC(UniMod:4)IITLDGNNLTVK2	13055.1	6648.35	
Q02445	Q02445	TFPI1_RAT	Tfpi	Tissue factor pathway inhibitor	1	PDFCFLEEDPGICR	PDFC(UniMod:4)FLEEDPGIC(UniMod:4)R	2	PDFC(UniMod:4)FLEEDPGIC(UniMod:4)R2	44434.4	41861.3	34896.3
Q02445	Q02445	TFPI1_RAT	Tfpi	Tissue factor pathway inhibitor	1	PDFCFLEEDPGICR	PDFC(UniMod:4)FLEEDPGIC(UniMod:4)R	3	PDFC(UniMod:4)FLEEDPGIC(UniMod:4)R3	22798.1	22997.1	21256.6
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	PDFHGETHTSR	PDFHGETHTSR	3	PDFHGETHTSR3			1983.14
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	PDFIFWTGDDTPHVPNER	PDFIFWTGDDTPHVPNER	3	PDFIFWTGDDTPHVPNER3	43624.6	36867.5	67455.1
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	PDGEYWLGLEPVHQVTSR	PDGEYWLGLEPVHQVTSR	3	PDGEYWLGLEPVHQVTSR3	5987.32	10187.2	14725.3
P04917	P04917	SRGN_RAT	Srgn	Serglycin	1	PDGIFANCIEEK	PDGIFANC(UniMod:4)IEEK	2	PDGIFANC(UniMod:4)IEEK2	16193.6	15449	17188.8
Q63358	Q63358;Q9Z1N3	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	0	PDIVALLR	PDIVALLR	2	PDIVALLR2	4744.75	2739.75	976.876
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	PDLPQGTEDTAK	PDLPQGTEDTAK	2	PDLPQGTEDTAK2	37458.2	24794.8	26206.3
P62329	P62329	TYB4_RAT	Tmsb4x	Thymosin beta-4	1	PDMAEIEK	PDMAEIEK	1	PDMAEIEK1	3771.01	4560.3	4825.57
P62329	P62329	TYB4_RAT	Tmsb4x	Thymosin beta-4	1	PDMAEIEK	PDMAEIEK	2	PDMAEIEK2	67064.2	60090.4	58267.5
P85108	P69897;Q6P9T8;B4F7C2;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	PDNFVFGQSGAGNNWAK	PDNFVFGQSGAGNNWAK	2	PDNFVFGQSGAGNNWAK2	44621.2	44376.9	34247.4
P85108	P69897;Q6P9T8;B4F7C2;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	PDNFVFGQSGAGNNWAK	PDNFVFGQSGAGNNWAK	3	PDNFVFGQSGAGNNWAK3	13938.3	15841	12645.5
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	PDNGFVNYPAKPVLSYK	PDNGFVNYPAKPVLSYK	3	PDNGFVNYPAKPVLSYK3	2657.25	4522.92	219.03
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	PDNTYEVK	PDNTYEVK	2	PDNTYEVK2	5492.06	5537.28	9367.73
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	PDPGPQPELR	PDPGPQPELR	2	PDPGPQPELR2	21414.9	19398.9	18145.3
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	PDPGPQPELRPR	PDPGPQPELRPR	3	PDPGPQPELRPR3	9528.81	10190.6	
Q6P6V6	Q6P6V6	GP108_RAT	Gpr108	Protein GPR108	1	PDPTGTPK	PDPTGTPK	2	PDPTGTPK2	8545.66	25517.9	17365.8
F7FGS9	F7FGS9	F7FGS9_RAT	Marchf5	Membrane associated ring-CH-type finger 5	1	PDQALQQMLDR	PDQALQQMLDR	2	PDQALQQMLDR2	5845.49	3431.28	8939.14
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	PDQISVSEFVAETHEDYK	PDQISVSEFVAETHEDYK	3	PDQISVSEFVAETHEDYK3	7907.7		
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	PDQISVSEFVAETHEDYKAPTASSFTTR	PDQISVSEFVAETHEDYKAPTASSFTTR	4	PDQISVSEFVAETHEDYKAPTASSFTTR4	29989.9	39026.3	42989.1
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	PDSELQLNTGNGLFVNK	PDSELQLNTGNGLFVNK	2	PDSELQLNTGNGLFVNK2			3653.82
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	PDSLFFTDGQR	PDSLFFTDGQR	2	PDSLFFTDGQR2	74443.5	72324.9	84520.7
D4A0T0	D4A0T0	D4A0T0_RAT	Ndufb10	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10	1	PDSWDKDVYPEPPR	PDSWDKDVYPEPPR	3	PDSWDKDVYPEPPR3	31813.2	109676	78451.4
D4A0T0	D4A0T0	D4A0T0_RAT	Ndufb10	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10	1	PDSWDKDVYPEPPRR	PDSWDKDVYPEPPRR	4	PDSWDKDVYPEPPRR4	33064.8	20790.5	19857.3
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	PDTEYEVSLISR	PDTEYEVSLISR	2	PDTEYEVSLISR2	4421.34	6163.66	3830.31
O35763	O35763;P31977;Q5PQK5	MOES_RAT	Msn	Moesin	0	PDTIEVQQMK	PDTIEVQQMK	2	PDTIEVQQMK2	4827.64	4420.9	4990.8
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	PDTTDEGTSEFPEEELCSGK	PDTTDEGTSEFPEEELC(UniMod:4)SGK	3	PDTTDEGTSEFPEEELC(UniMod:4)SGK3	24581.9	8108.03	10707.2
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	PDVMYADIGGMDIQK	PDVMYADIGGMDIQK	2	PDVMYADIGGMDIQK2	6425.51	4190.23	
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	PDVVITEK	PDVVITEK	2	PDVVITEK2	5595.1	3714.39	8567.8
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	PDWAIFGR	PDWAIFGR	2	PDWAIFGR2	6935.79	9048.58	8148.6
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	PDYLGADQR	PDYLGADQR	2	PDYLGADQR2	172936	146303	163974
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	PDYLGADQRK	PDYLGADQRK	3	PDYLGADQRK3	4031.21	3399.71	14309
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	PDYNSIEK	PDYNSIEK	2	PDYNSIEK2	4211.9		4538.77
P02770	P02770	ALBU_RAT	Alb	Albumin	1	PEAEAMCTSFQENPTSFLGHYLHEVAR	PEAEAMC(UniMod:4)TSFQENPTSFLGHYLHEVAR	4	PEAEAMC(UniMod:4)TSFQENPTSFLGHYLHEVAR4	19582.6	11748	9605.97
G3V9N6	G3V9N6	G3V9N6_RAT	LOC100361913	RCG54286-like	1	PEAGAAHK	PEAGAAHK	2	PEAGAAHK2			9322.93
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	PEAVEVTFADFDGVLYHISNPNGDK	PEAVEVTFADFDGVLYHISNPNGDK	3	PEAVEVTFADFDGVLYHISNPNGDK3	11860.1	6594.15	9312.21
P35565	P18418;P35565	CALX_RAT	Canx	Calnexin	0	PEDWDER	PEDWDER	2	PEDWDER2	15962.2	12748.6	13371.9
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	PEDWDKPEHIPDPDAK	PEDWDKPEHIPDPDAK	4	PEDWDKPEHIPDPDAK4	7519.99	9103.51	5109.96
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	PEDYQGGR	PEDYQGGR	2	PEDYQGGR2			17978
P19804	A0A8I6A4T4;P19804	NDKB_RAT	Nme2	Nucleoside diphosphate kinase B	0	PEELIDYK	PEELIDYK	2	PEELIDYK2	4537.05	5522.31	5119.13
Q62733	Q62733	LAP2_RAT	Tmpo	Lamina-associated polypeptide 2, isoform beta	1	PEFLEDPSVLTK	PEFLEDPSVLTK	2	PEFLEDPSVLTK2	9804.46	10548.2	7944.5
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	PEHELFLVYGK	PEHELFLVYGK	3	PEHELFLVYGK3	3485.59	2548	
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	PEIGNGVLSTNK	PEIGNGVLSTNK	2	PEIGNGVLSTNK2	9304.92	7879.14	7393.9
A0A8I5ZM79	A0A8I5ZM79	A0A8I5ZM79_RAT	Psmd7	Proteasome 26S subunit, non-ATPase 7	1	PELAVQK	PELAVQK	2	PELAVQK2	25266.3	42144.5	36992.6
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	PENVASR	PENVASR	2	PENVASR2			315028
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PEPEETCFDK	PEPEETC(UniMod:4)FDK	2	PEPEETC(UniMod:4)FDK2	1.31389e+06	1.53865e+06	1.38823e+06
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	PEPMEEDLPENK	PEPMEEDLPENK	2	PEPMEEDLPENK2	3749.48	9883.71	4676.83
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	PESDELTAEK	PESDELTAEK	2	PESDELTAEK2	38048.9	44288.5	50215.2
P30349	P30349	LKHA4_RAT	Lta4h	Leukotriene A-4 hydrolase	1	PEVADTCSLASPASVCR	PEVADTC(UniMod:4)SLASPASVC(UniMod:4)R	2	PEVADTC(UniMod:4)SLASPASVC(UniMod:4)R2	1547.49		442.462
P63269	P63269	ACTH_RAT	Actg2	Actin, gamma-enteric smooth muscle	1	PEYDEAGPSIVHR	PEYDEAGPSIVHR	3	PEYDEAGPSIVHR3	36491	30282.3	41189.7
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	PEYNFLVNLDHVEFK	PEYNFLVNLDHVEFK	3	PEYNFLVNLDHVEFK3	2815.9	4960.16	4427.1
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	PFCEVYVGEER	PFC(UniMod:4)EVYVGEER	2	PFC(UniMod:4)EVYVGEER2	3583.5	4455.08	
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	PFDAFTDLK	PFDAFTDLK	2	PFDAFTDLK2	58718.1	20148.1	47094.6
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	PFDLVIPFTIK	PFDLVIPFTIK	2	PFDLVIPFTIK2	2582.03	6344.4	7418.12
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	PFDYNGPR	PFDYNGPR	2	PFDYNGPR2	39815.2	35610.1	29685.8
Q6AY63	Q6AY63	NUDT5_RAT	Nudt5	ADP-sugar pyrophosphatase	1	PFEVPFLK	PFEVPFLK	2	PFEVPFLK2	8272.73	6669.26	2731.12
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	PFFAAGNTFEMTCK	PFFAAGNTFEMTC(UniMod:4)K	2	PFFAAGNTFEMTC(UniMod:4)K2	2272.06	2131.15	
P11232	P11232	THIO_RAT	Txn	Thioredoxin	1	PFFHSLCDK	PFFHSLC(UniMod:4)DK	3	PFFHSLC(UniMod:4)DK3	19951.7	12540.6	9983.66
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	PFGSVSSPK	PFGSVSSPK	2	PFGSVSSPK2	71616.5	55535.1	61070
P34064	P34064	PSA5_RAT	Psma5	Proteasome subunit alpha type-5	1	PFGVALLFGGVDEK	PFGVALLFGGVDEK	2	PFGVALLFGGVDEK2	12585.1	4231.91	9099.61
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	PFISVEWLK	PFISVEWLK	2	PFISVEWLK2	6204.1	1703.91	
B5DEL8	B5DEL8	B5DEL8_RAT	Ndufs5	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5	1	PFLDVQK	PFLDVQK	2	PFLDVQK2	107048	78553.2	88970.1
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	PFLFLVYEHR	PFLFLVYEHR	2	PFLFLVYEHR2	8022.3	5225.79	7663.3
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	PFLFLVYEHR	PFLFLVYEHR	3	PFLFLVYEHR3	137581	82210.4	57890.9
Q641X7	Q641X7;Q91Z62	FBX25_RAT	Fbxo25	F-box only protein 25	0	PFLGQDWR	PFLGQDWR	2	PFLGQDWR2	7528.38	8707.49	8574.25
B5DF24	B5DF24	B5DF24_RAT	Uck1	Uridine-cytidine kinase	1	PFLIGVSGGTASGK	PFLIGVSGGTASGK	2	PFLIGVSGGTASGK2	6190.06	8505.46	3475.6
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	PFLLLMATPLER	PFLLLMATPLER	2	PFLLLMATPLER2	9966.89	4611.78	9525.3
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	PFLLPVESVYSIPGR	PFLLPVESVYSIPGR	2	PFLLPVESVYSIPGR2	11274.2		12598.3
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	PFLLPVESVYSIPGR	PFLLPVESVYSIPGR	3	PFLLPVESVYSIPGR3	3740.92		
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	PFLLQLAESAYR	PFLLQLAESAYR	2	PFLLQLAESAYR2	8823.58	9470	10023.5
F1LRI5	F1LRI5	F1LRI5_RAT	Gcn1	GCN1 activator of EIF2AK4	1	PFLPQLQTTFTK	PFLPQLQTTFTK	2	PFLPQLQTTFTK2	5393.29	4545.36	
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	PFLVLIR	PFLVLIR	2	PFLVLIR2	4295.02		
P62828	P62828	RAN_RAT	Ran	GTP-binding nuclear protein Ran	1	PFLWLAR	PFLWLAR	2	PFLWLAR2	18692.8	12221.8	15464.8
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	PFMLDEEGDAQTEETQPSETK	PFMLDEEGDAQTEETQPSETK	3	PFMLDEEGDAQTEETQPSETK3	13801	11415.9	13805.2
G3V9L1	G3V9L1	G3V9L1_RAT	Tex2	Testis expressed 2	1	PFMSLVK	PFMSLVK	2	PFMSLVK2	4618.07	4643.36	3631.18
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	PFNPLLGETFELDRLEENGYR	PFNPLLGETFELDRLEENGYR	3	PFNPLLGETFELDRLEENGYR3	15155.2	34969.7	14633.8
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	PFPNTNSMYIDRPPTGK	PFPNTNSMYIDRPPTGK	3	PFPNTNSMYIDRPPTGK3	154830	145754	123146
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	PFPQILEEK	PFPQILEEK	2	PFPQILEEK2	69804.8	73423.2	70524.9
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	PFPQTASK	PFPQTASK	2	PFPQTASK2	361026	334008	321672
B2GV07;D4A6L5	D4A6L5;B2GV07	B2GV07_RAT;D4A6L5_RAT	Zfp786;Zscan25	Zinc finger protein 786	0	PFQCPECGK	PFQC(UniMod:4)PEC(UniMod:4)GK	2	PFQC(UniMod:4)PEC(UniMod:4)GK2	1223.83		
Q5I0C9	Q5I0C9	Q5I0C9_RAT	Utp4	Cirrhosis, autosomal recessive 1A (Human)	1	PFQHHTHDVR	PFQHHTHDVR	2	PFQHHTHDVR2			3477.4
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	PFQSIIHAK	PFQSIIHAK	2	PFQSIIHAK2	11437.7	9168.22	8305.6
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	PFQSQLPIVK	PFQSQLPIVK	2	PFQSQLPIVK2	3979.73		1456.64
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	PFSAPKPQTSPSPK	PFSAPKPQTSPSPK	3	PFSAPKPQTSPSPK3	364641	258140	250420
B3GNI6	A0A8I6AA08;B3GNI6	SEP11_RAT	Septin11	Septin-11	0	PFSLQETYEAK	PFSLQETYEAK	2	PFSLQETYEAK2	28515.8	22056.5	20609.8
P07335	P07335	KCRB_RAT	Ckb	Creatine kinase B-type	1	PFSNSHNTQK	PFSNSHNTQK	2	PFSNSHNTQK2			37043.2
Q10473	Q10473;Q6UE39	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	0	PFSWYLENIYPDSQIPR	PFSWYLENIYPDSQIPR	3	PFSWYLENIYPDSQIPR3	9016.17	11800.4	7948.23
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	PFTCLDGTATIPFDQVNDDYCDCK	PFTC(UniMod:4)LDGTATIPFDQVNDDYC(UniMod:4)DC(UniMod:4)K	3	PFTC(UniMod:4)LDGTATIPFDQVNDDYC(UniMod:4)DC(UniMod:4)K3	36848	45935.7	38008.7
Q5XIM0	Q5XIM0	Q5XIM0_RAT	Bcs1l	Mitochondrial chaperone BCS1	1	PFTDFVLALK	PFTDFVLALK	2	PFTDFVLALK2		3095.22	2426.76
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	PFTDVSIVMR	PFTDVSIVMR	2	PFTDVSIVMR2	6219.71	7611.98	
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	PFTEEDFQEMIK	PFTEEDFQEMIK	2	PFTEEDFQEMIK2	8458.9	3907.87	10573.2
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	PFTGFEAFYAAEDVDECR	PFTGFEAFYAAEDVDEC(UniMod:4)R	3	PFTGFEAFYAAEDVDEC(UniMod:4)R3	48186.6	53104.4	69084.3
Q63313	Q63313	LBP_RAT	Lbp	Lipopolysaccharide-binding protein	1	PFTPLITR	PFTPLITR	2	PFTPLITR2	12717.3	12253.9	7153.15
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	PFTQLVK	PFTQLVK	2	PFTQLVK2	23213.7	32339.6	20095.5
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	PFTYLPFGAGPR	PFTYLPFGAGPR	2	PFTYLPFGAGPR2	50612.6	53763	50684.7
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	PFVEKPVSAEDHNVYIYYPTSAGGGSQR	PFVEKPVSAEDHNVYIYYPTSAGGGSQR	4	PFVEKPVSAEDHNVYIYYPTSAGGGSQR4	1491.33		5106.01
P80254	P80254	DOPD_RAT	Ddt	D-dopachrome decarboxylase	1	PFVELETNLPASR	PFVELETNLPASR	2	PFVELETNLPASR2	13321.8	12661.1	10608
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	PFVPNVHAAEFVPSFLR	PFVPNVHAAEFVPSFLR	2	PFVPNVHAAEFVPSFLR2	8956.67	13035.4	6649.36
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	PFVPNVHAAEFVPSFLR	PFVPNVHAAEFVPSFLR	3	PFVPNVHAAEFVPSFLR3	303257	340294	293062
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	PFYLYTGR	PFYLYTGR	2	PFYLYTGR2	3885.92	2000.43	
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	PFYTSYLR	PFYTSYLR	2	PFYTSYLR2	41038.6	41051.6	27437.5
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PGAAEPSPDGTTGHTYNQYTQR	PGAAEPSPDGTTGHTYNQYTQR	3	PGAAEPSPDGTTGHTYNQYTQR3	2.74962e+06	3.70289e+06	3.80445e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PGAAEPSPDGTTGHTYNQYTQR	PGAAEPSPDGTTGHTYNQYTQR	4	PGAAEPSPDGTTGHTYNQYTQR4	15434.1	14472.5	18198.6
A0A8I6G5Q1	A0A8I6G5Q1	A0A8I6G5Q1_RAT	Sema4d	Semaphorin 4D	1	PGACIDSEAR	PGAC(UniMod:4)IDSEAR	2	PGAC(UniMod:4)IDSEAR2	9388.39	4883.3	5392.23
D4A9Y0	D4A9Y0	D4A9Y0_RAT	Sdf2l1	Stromal cell-derived factor 2-like 1	1	PGADPSTGHDEL	PGADPSTGHDEL	2	PGADPSTGHDEL2	150165	130247	157811
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PGADYTITLYAVTGR	PGADYTITLYAVTGR	2	PGADYTITLYAVTGR2	111010	120916	108516
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PGADYTITLYAVTGR	PGADYTITLYAVTGR	3	PGADYTITLYAVTGR3	39623.6	51615.4	43806.4
Q1HAQ0	Q1HAQ0	PCAT1_RAT	Lpcat1	Lysophosphatidylcholine acyltransferase 1	1	PGAFIPGVPVQPVVLR	PGAFIPGVPVQPVVLR	2	PGAFIPGVPVQPVVLR2	23776.9	22084.6	37215
Q1HAQ0	Q1HAQ0	PCAT1_RAT	Lpcat1	Lysophosphatidylcholine acyltransferase 1	1	PGAFIPGVPVQPVVLR	PGAFIPGVPVQPVVLR	3	PGAFIPGVPVQPVVLR3	6490.88	3025.69	3657.49
Q99ME0	Q99ME0	Q99ME0_RAT	Ppbp	Pro-platelet basic protein	1	PGAHCDNVEVIATLK	PGAHC(UniMod:4)DNVEVIATLK	3	PGAHC(UniMod:4)DNVEVIATLK3	139373	106660	107068
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	PGANSTTDAVLLNK	PGANSTTDAVLLNK	2	PGANSTTDAVLLNK2	11363.5	14985.5	13564.2
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	PGANSTTDAVLLNK	PGANSTTDAVLLNK	3	PGANSTTDAVLLNK3	4227.59		1377
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	PGAPLRPK	PGAPLRPK	2	PGAPLRPK2		23035.4	
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	PGAQLYQFR	PGAQLYQFR	2	PGAQLYQFR2	8013.05	9779.73	9247.55
F1LNX8	F1LNX8	F1LNX8_RAT	Cmahp	Cytidine monophosphate-N-acetylneuraminic acid hydroxylase	1	PGATLDLGR	PGATLDLGR	2	PGATLDLGR2	4053.66	3512.75	2276.97
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	PGAVVIDCGINYVPDDTKPNGR	PGAVVIDC(UniMod:4)GINYVPDDTKPNGR	3	PGAVVIDC(UniMod:4)GINYVPDDTKPNGR3	3724.77	5230.55	1930.79
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PGCFDNGK	PGC(UniMod:4)FDNGK	2	PGC(UniMod:4)FDNGK2	14500.3	15967.5	15198.9
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	PGCIIALDSITK	PGC(UniMod:4)IIALDSITK	2	PGC(UniMod:4)IIALDSITK2	3840.42	6385.6	1828.09
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	PGCSDLEEAGDSGVDK	PGC(UniMod:4)SDLEEAGDSGVDK	2	PGC(UniMod:4)SDLEEAGDSGVDK2	1141.63	934.153	
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	PGCSDLEEAGDSGVDKK	PGC(UniMod:4)SDLEEAGDSGVDKK	3	PGC(UniMod:4)SDLEEAGDSGVDKK3	4430.86	4630.91	6557.35
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	PGDETTPQGDSADEK	PGDETTPQGDSADEK	2	PGDETTPQGDSADEK2	32228.2		17203.1
Q5XIM5	Q5XIM5	CDV3_RAT	Cdv3	Protein CDV3 homolog	1	PGDGGSLGSGAR	PGDGGSLGSGAR	2	PGDGGSLGSGAR2		11086.6	
P01026	P01026	CO3_RAT	C3	Complement C3	1	PGDNLNVNFHLR	PGDNLNVNFHLR	2	PGDNLNVNFHLR2	25031.5	11606.9	18080.9
P22734	P22734	COMT_RAT	Comt	Catechol O-methyltransferase	1	PGDPQSVLEAIDTYCTQK	PGDPQSVLEAIDTYC(UniMod:4)TQK	3	PGDPQSVLEAIDTYC(UniMod:4)TQK3	10837.2	10221.5	18794
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	PGDSWLSRPIPK	PGDSWLSRPIPK	3	PGDSWLSRPIPK3	4153.3	3707.91	
D3ZJF8	D3ZJF8;F7EZQ4	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	0	PGEEEFSIVLEK	PGEEEFSIVLEK	2	PGEEEFSIVLEK2	26228.8	19041.3	13769.4
Q5XIU9	Q5XIU9	PGRC2_RAT	Pgrmc2	Membrane-associated progesterone receptor component 2	1	PGEEPSEYTDEEDTK	PGEEPSEYTDEEDTK	2	PGEEPSEYTDEEDTK2	2472.09	911.817	
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	PGEFIHTNWTGHGGSVSSSSYNA	PGEFIHTNWTGHGGSVSSSSYNA	3	PGEFIHTNWTGHGGSVSSSSYNA3	12939.4	2742.62	16219.4
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	PGEGHLDALLR	PGEGHLDALLR	3	PGEGHLDALLR3	3985.36		
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	PGELLAVVGPVGAGK	PGELLAVVGPVGAGK	2	PGELLAVVGPVGAGK2	23264.6	25278.2	23511
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	PGELLAVVGPVGAGK	PGELLAVVGPVGAGK	3	PGELLAVVGPVGAGK3	3024.22	2904.12	5761.44
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	PGELMVGENEAR	PGELMVGENEAR	2	PGELMVGENEAR2	7028.26	5591.78	2872.13
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	PGEREDLVSAGQR	PGEREDLVSAGQR	3	PGEREDLVSAGQR3	17896.4	14509.5	13165.9
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	PGESLEVIQSTDDTK	PGESLEVIQSTDDTK	2	PGESLEVIQSTDDTK2	49475.2	44658.1	49168.7
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	PGESLEVIQSTDDTK	PGESLEVIQSTDDTK	3	PGESLEVIQSTDDTK3	13606.8	15071.6	18419.6
Q91XJ1	Q91XJ1	BECN1_RAT	Becn1	Beclin-1	1	PGESQEEEANSGEEPFIETR	PGESQEEEANSGEEPFIETR	3	PGESQEEEANSGEEPFIETR3	8907.81	1749.07	3889.52
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	PGEVAEELASSYER	PGEVAEELASSYER	2	PGEVAEELASSYER2	3078.64	3378.87	7630.82
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	PGEVCEPSGGVLTCITK	PGEVC(UniMod:4)EPSGGVLTC(UniMod:4)ITK	2	PGEVC(UniMod:4)EPSGGVLTC(UniMod:4)ITK2	114559	107535	102373
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	PGEVCEPSGGVLTCITK	PGEVC(UniMod:4)EPSGGVLTC(UniMod:4)ITK	3	PGEVC(UniMod:4)EPSGGVLTC(UniMod:4)ITK3	54958.3	41990.5	51072.7
A0A8I6GEV9	A0A8I6GEV9	A0A8I6GEV9_RAT	Abce1	ATP binding cassette subfamily E member 1	1	PGEVLGLVGTNGIGK	PGEVLGLVGTNGIGK	2	PGEVLGLVGTNGIGK2	5308.37	6196.28	6140.8
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	PGFFGAHCSSR	PGFFGAHC(UniMod:4)SSR	3	PGFFGAHC(UniMod:4)SSR3	11360.5	13861.5	17086.6
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	PGFFGDATK	PGFFGDATK	2	PGFFGDATK2	5019.77	7778.89	8996.15
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	PGFFNLESSNPK	PGFFNLESSNPK	2	PGFFNLESSNPK2	9305.11	14617.7	10913.7
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	PGFGGMNCDR	PGFGGMNC(UniMod:4)DR	2	PGFGGMNC(UniMod:4)DR2	20975.8	26520	18536
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	PGFHTVPGQPGCQDINECLR	PGFHTVPGQPGC(UniMod:4)QDINEC(UniMod:4)LR	3	PGFHTVPGQPGC(UniMod:4)QDINEC(UniMod:4)LR3	180680	200680	178404
A0A8I5Y6H9	A0A8I5Y6H9	A0A8I5Y6H9_RAT	Tln2	Talin 2	1	PGFLDLK	PGFLDLK	2	PGFLDLK2	69423.6	59688.8	51208.3
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	PGFQLASDGR	PGFQLASDGR	2	PGFQLASDGR2	7108.34	14136.5	
F1LTT7	F1LTT7	F1LTT7_RAT	Dennd4b	DENN domain containing 4B	1	PGFQVLDTTPYSHSANLAPPGPGHPR	PGFQVLDTTPYSHSANLAPPGPGHPR	4	PGFQVLDTTPYSHSANLAPPGPGHPR4	3977.6		1652.48
P58751	P58751	RELN_RAT	Reln	Reelin	1	PGFVNILLPPDAK	PGFVNILLPPDAK	2	PGFVNILLPPDAK2	68333.4	68921.3	82825.9
P58751	P58751	RELN_RAT	Reln	Reelin	1	PGFVNILLPPDAK	PGFVNILLPPDAK	3	PGFVNILLPPDAK3	16103.4	19439.5	10504.7
Q6DGF9	Q6DGF9;A0FKI7	ACBD4_RAT	Acbd4	Acyl-CoA-binding domain-containing protein 4	0	PGFWDPIGR	PGFWDPIGR	2	PGFWDPIGR2	9355.09	9536.74	
G3V7N0	G3V7N0	G3V7N0_RAT	Hs2st1	Heparan sulfate 2-O-sulfotransferase 1	1	PGFYHGHISYLDFAK	PGFYHGHISYLDFAK	4	PGFYHGHISYLDFAK4		8157.54	
D4A529	D4A529;Q4QQU1	D4A529_RAT	She	Src homology 2 domain containing E	0	PGGAGGK	PGGAGGK	1	PGGAGGK1	18227.6	14753.8	14723.3
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	PGGAGGLPIGDEDEGEEALAEHPAVEPR	PGGAGGLPIGDEDEGEEALAEHPAVEPR	3	PGGAGGLPIGDEDEGEEALAEHPAVEPR3	5002.61	4833.48	7441.24
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	PGGCSDICLLANSHK	PGGC(UniMod:4)SDIC(UniMod:4)LLANSHK	3	PGGC(UniMod:4)SDIC(UniMod:4)LLANSHK3	14123	11386	9447.1
P51111	P51111	HD_RAT	Htt	Huntingtin	1	PGGDFGTVFPEIPVEFLQEK	PGGDFGTVFPEIPVEFLQEK	3	PGGDFGTVFPEIPVEFLQEK3	6809.65	2753.23	2377.08
P23764	P23764;Q64625	GPX3_RAT	Gpx3	Glutathione peroxidase 3	0	PGGGFVPNFQLFEK	PGGGFVPNFQLFEK	2	PGGGFVPNFQLFEK2	3.87545e+06	3.8618e+06	3.37558e+06
P23764	P23764;Q64625	GPX3_RAT	Gpx3	Glutathione peroxidase 3	0	PGGGFVPNFQLFEK	PGGGFVPNFQLFEK	3	PGGGFVPNFQLFEK3	41105.8	92173.3	53030.4
O35244	O35244	PRDX6_RAT	Prdx6	Peroxiredoxin-6	1	PGGLLLGDEAPNFEANTTIGHIR	PGGLLLGDEAPNFEANTTIGHIR	3	PGGLLLGDEAPNFEANTTIGHIR3	7427.91	4333.39	9862.61
Q99372	Q99372	ELN_RAT	Eln	Elastin	1	PGGVLVPGGGAGAAAAYK	PGGVLVPGGGAGAAAAYK	2	PGGVLVPGGGAGAAAAYK2	12697.5	11066.1	7284.37
Q63663	Q63663	GBP2_RAT	Gbp2	Guanylate-binding protein 2	1	PGGYFLFLQMR	PGGYFLFLQMR	2	PGGYFLFLQMR2	5301.77	5448.5	3099.75
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	PGGYTCACDPGFR	PGGYTC(UniMod:4)AC(UniMod:4)DPGFR	2	PGGYTC(UniMod:4)AC(UniMod:4)DPGFR2	57055.2	52681.9	39646.1
Q562B5	Q562B5	PGAM5_RAT	Pgam5	Serine/threonine-protein phosphatase PGAM5, mitochondrial	1	PGHGVWDSNWDR	PGHGVWDSNWDR	3	PGHGVWDSNWDR3	10641.5	7336.42	15235.9
Q6AXS5	Q6AXS5	SERB1_RAT	Serbp1	SERPINE1 mRNA-binding protein 1	1	PGHLQEGFGCVVTNR	PGHLQEGFGC(UniMod:4)VVTNR	2	PGHLQEGFGC(UniMod:4)VVTNR2	6981		
Q6AXS5	Q6AXS5	SERB1_RAT	Serbp1	SERPINE1 mRNA-binding protein 1	1	PGHLQEGFGCVVTNR	PGHLQEGFGC(UniMod:4)VVTNR	3	PGHLQEGFGC(UniMod:4)VVTNR3	45213.7	14559.4	26166.3
E9PTA5	E9PTA5	E9PTA5_RAT	Pign	GPI ethanolamine phosphate transferase 1	1	PGHVALIAGFYEDVSAVAK	PGHVALIAGFYEDVSAVAK	2	PGHVALIAGFYEDVSAVAK2		2255.91	
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	PGHVLEGSHLR	PGHVLEGSHLR	2	PGHVLEGSHLR2	4439.63	1079.62	3824.12
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	PGHVLEGSHLR	PGHVLEGSHLR	3	PGHVLEGSHLR3	22720.6	26654.9	20368.5
D3ZWA8	D3ZWA8	D3ZWA8_RAT	Appl1	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1	1	PGIDKLPIEETLEDSPQTR	PGIDKLPIEETLEDSPQTR	3	PGIDKLPIEETLEDSPQTR3	11954.7	13382.9	12409.6
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	PGILAEMLTPEEK	PGILAEMLTPEEK	2	PGILAEMLTPEEK2			3482.65
P08650	P08650	CO5_RAT	C5	Complement C5	1	PGIPFSIK	PGIPFSIK	2	PGIPFSIK2	53335.1	39819.8	29146.5
A0A0G2JVL6	A0A0G2JVL6	A0A0G2JVL6_RAT	Ndufa8	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8	1	PGIVELPTLEELK	PGIVELPTLEELK	2	PGIVELPTLEELK2	63298.2	55653	53809.7
O88563	O88563	MRP3_RAT	Abcc3	ATP-binding cassette sub-family C member 3	1	PGLELVLK	PGLELVLK	1	PGLELVLK1	9330.84		13737.6
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	PGLGPYLCNQLGLPFPCLCR	PGLGPYLC(UniMod:4)NQLGLPFPC(UniMod:4)LC(UniMod:4)R	3	PGLGPYLC(UniMod:4)NQLGLPFPC(UniMod:4)LC(UniMod:4)R3	17574.5	16646.7	9249.67
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	PGLGSNPCIPFFYR	PGLGSNPC(UniMod:4)IPFFYR	2	PGLGSNPC(UniMod:4)IPFFYR2	7980.16	4598.03	3759.56
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	PGLHQFTVLQENEPWGNGK	PGLHQFTVLQENEPWGNGK	3	PGLHQFTVLQENEPWGNGK3	14417.2	15170.4	13370.7
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	PGLPFFGQVLLVDEK	PGLPFFGQVLLVDEK	2	PGLPFFGQVLLVDEK2	1.01623e+06	724266	694871
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	PGLPFFGQVLLVDEK	PGLPFFGQVLLVDEK	3	PGLPFFGQVLLVDEK3	158963	115428	124125
P31399	P31399	ATP5H_RAT	Atp5pd	ATP synthase subunit d, mitochondrial	1	PGLVDDFK	PGLVDDFK	2	PGLVDDFK2	6983.85	7916.79	6909.85
B1WBZ6	B1WBZ6	B1WBZ6_RAT	RGD1565685	RGD1565685 protein	1	PGLWPVDPWEVAK	PGLWPVDPWEVAK	2	PGLWPVDPWEVAK2	9836.01	4582.82	9815.72
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	PGMEQYLLAK	PGMEQYLLAK	2	PGMEQYLLAK2	43627.9	37147.9	37549.9
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	PGMFFNPEESELDLTYGNR	PGMFFNPEESELDLTYGNR	3	PGMFFNPEESELDLTYGNR3	5312.44	7162.35	6084.49
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	PGMICQLGCR	PGMIC(UniMod:4)QLGC(UniMod:4)R	2	PGMIC(UniMod:4)QLGC(UniMod:4)R2	19650.9	12865.3	18682.7
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	PGMIEGATQK	PGMIEGATQK	2	PGMIEGATQK2	268471	185018	231326
P28077	P28077	PSB9_RAT	Psmb9	Proteasome subunit beta type-9	1	PGMTPEECR	PGMTPEEC(UniMod:4)R	2	PGMTPEEC(UniMod:4)R2	16544.3	19175.4	28057.8
P28077	P28077	PSB9_RAT	Psmb9	Proteasome subunit beta type-9	1	PGMTPEECRR	PGMTPEEC(UniMod:4)RR	3	PGMTPEEC(UniMod:4)RR3	27222	49433.3	31321.2
P0C1S9	P0C1S9	DGLB_RAT	Daglb	Diacylglycerol lipase-beta	1	PGMVLFGR	PGMVLFGR	2	PGMVLFGR2	91804.1	90925.1	87163.8
P62630	P62630;F1M6C2;M0R757	EF1A1_RAT	Eef1a1	Elongation factor 1-alpha 1	0	PGMVVTFAPVNVTTEVK	PGMVVTFAPVNVTTEVK	2	PGMVVTFAPVNVTTEVK2	30087.8	18849.3	10356
P62630	P62630;F1M6C2;M0R757	EF1A1_RAT	Eef1a1	Elongation factor 1-alpha 1	0	PGMVVTFAPVNVTTEVK	PGMVVTFAPVNVTTEVK	3	PGMVVTFAPVNVTTEVK3	10971.4	4737.01	
M0RAK0	M0RAK0	M0RAK0_RAT	Proser2	Proline and serine rich 2	1	PGNQQKPESLDMDSDMSPSGGLSDLSR	PGNQQKPESLDMDSDMSPSGGLSDLSR	3	PGNQQKPESLDMDSDMSPSGGLSDLSR3	21075.4	31680.7	31678.9
A0A0G2JWX2	D4A409;A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	0	PGNWILER	PGNWILER	2	PGNWILER2	10951.6	13748.7	11312.4
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	PGPAPHDQELGFFLETGLQR	PGPAPHDQELGFFLETGLQR	3	PGPAPHDQELGFFLETGLQR3	12658.7		16995.8
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	PGPEGQLAATALQK	PGPEGQLAATALQK	3	PGPEGQLAATALQK3	2253.71		
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	PGPFLLSGSR	PGPFLLSGSR	2	PGPFLLSGSR2	16754.9	9102.17	13808.9
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	PGPGLPAGTLPLAGPPR	PGPGLPAGTLPLAGPPR	2	PGPGLPAGTLPLAGPPR2	19197.6	15247.6	11657.9
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	PGPGLPAGTLPLAGPPR	PGPGLPAGTLPLAGPPR	3	PGPGLPAGTLPLAGPPR3	4109.35	8810	6389.65
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	PGPGMSQEAVR	PGPGMSQEAVR	2	PGPGMSQEAVR2	8541.26	6520.46	4553.52
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	PGPPPATR	PGPPPATR	2	PGPPPATR2	15470.4		12614.9
Q6IN36	Q6IN36	WIPF1_RAT	Wipf1	WAS/WASL-interacting protein family member 1	1	PGPPPLPPTSSDEIPR	PGPPPLPPTSSDEIPR	2	PGPPPLPPTSSDEIPR2	4213.86	3442.92	
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	PGPSLNKPTLALATLR	PGPSLNKPTLALATLR	3	PGPSLNKPTLALATLR3	1720.51	1352.37	2889.56
B2RZD1	B2RZD1	B2RZD1_RAT	Sec61b	Protein transport protein Sec61 subunit beta	1	PGPTPSATNVGSSGR	PGPTPSATNVGSSGR	2	PGPTPSATNVGSSGR2	85722.8	89645.2	92506.9
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	PGPVQVVLVHK	PGPVQVVLVHK	3	PGPVQVVLVHK3	6705.04	12012.5	10163.7
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	PGPWRPFVKPGGWR	PGPWRPFVKPGGWR	4	PGPWRPFVKPGGWR4	38561.6	32485	35455.1
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	PGPYDQPLVNTLQR	PGPYDQPLVNTLQR	2	PGPYDQPLVNTLQR2	3606.64	3006.02	
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	PGPYDQPLVNTLQR	PGPYDQPLVNTLQR	3	PGPYDQPLVNTLQR3	13675.4	10565.3	8434.58
Q03555	Q03555	GEPH_RAT	Gphn	Gephyrin	1	PGQDIRPIGHDIK	PGQDIRPIGHDIK	3	PGQDIRPIGHDIK3	7415.16	5937.98	
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	PGQFSVPHSLALVPHLDQLCVADR	PGQFSVPHSLALVPHLDQLC(UniMod:4)VADR	4	PGQFSVPHSLALVPHLDQLC(UniMod:4)VADR4		1777.51	
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	PGQHPAASPTHPGAVR	PGQHPAASPTHPGAVR	4	PGQHPAASPTHPGAVR4			5693.03
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	PGQIPWQVILNGEIEAFCGGAIINEK	PGQIPWQVILNGEIEAFC(UniMod:4)GGAIINEK	3	PGQIPWQVILNGEIEAFC(UniMod:4)GGAIINEK3	220930	67347.3	91309.4
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	PGQIPWQVILNGEIEAFCGGAIINEK	PGQIPWQVILNGEIEAFC(UniMod:4)GGAIINEK	4	PGQIPWQVILNGEIEAFC(UniMod:4)GGAIINEK4	17327.2	10949.3	11600.7
A0A8I5Y9R1	A0A8I5Y9R1	A0A8I5Y9R1_RAT	ENSRNOG00000066814	Ig-like domain-containing protein	1	PGQPPQLLIYLVSR	PGQPPQLLIYLVSR	2	PGQPPQLLIYLVSR2	31396.6	38840.1	20167.4
A0A8I5Y9R1	A0A8I5Y9R1	A0A8I5Y9R1_RAT	ENSRNOG00000066814	Ig-like domain-containing protein	1	PGQPPQLLIYLVSR	PGQPPQLLIYLVSR	3	PGQPPQLLIYLVSR3	5768.58	2231.9	3415.64
A0A8I6AVW1	A0A8I6AVW1	A0A8I6AVW1_RAT	ENSRNOG00000064582	Ig-like domain-containing protein	1	PGQSPQLLIYGVSNR	PGQSPQLLIYGVSNR	2	PGQSPQLLIYGVSNR2	21034	17454.7	11639
A0A8I6AVW1	A0A8I6AVW1	A0A8I6AVW1_RAT	ENSRNOG00000064582	Ig-like domain-containing protein	1	PGQSPQLLIYGVSNR	PGQSPQLLIYGVSNR	3	PGQSPQLLIYGVSNR3	16658	31557.5	27977
A0A8I6ABH0	A0A8I5ZPH3;A0A8I5Y130;A0A8I6ABH0	A0A8I6ABH0_RAT	ENSRNOG00000064061	Ig-like domain-containing protein	0	PGQSPQLLIYK	PGQSPQLLIYK	2	PGQSPQLLIYK2	8197.44	5055.34	7429.25
A0A8I5YBU3	A0A8I5YBU3	A0A8I5YBU3_RAT	ENSRNOG00000065160	Ig-like domain-containing protein	1	PGQSPQLLIYLASNR	PGQSPQLLIYLASNR	3	PGQSPQLLIYLASNR3	5443.26	748.396	
A0A8I5ZRU2	A0A8I5ZRU2	A0A8I5ZRU2_RAT	ENSRNOG00000063550	Ig-like domain-containing protein	1	PGQSPQLLIYQVSNR	PGQSPQLLIYQVSNR	2	PGQSPQLLIYQVSNR2	8563.67	6287.98	8439.5
A0A8I5ZRU2	A0A8I5ZRU2	A0A8I5ZRU2_RAT	ENSRNOG00000063550	Ig-like domain-containing protein	1	PGQSPQLLIYQVSNR	PGQSPQLLIYQVSNR	3	PGQSPQLLIYQVSNR3	19887.6	23082	18092.7
A0A8I5ZYV4;A0A8I6AFR0	A0A8I5ZYV4;A0A8I6AFR0	A0A8I5ZYV4_RAT;A0A8I6AFR0_RAT	ENSRNOG00000066203;ENSRNOG00000068847	Ig-like domain-containing protein	0	PGQSPQLLIYR	PGQSPQLLIYR	2	PGQSPQLLIYR2	39122.7	39842.5	34259.4
A0A8I6AJ98	A0A8I6AJ98	A0A8I6AJ98_RAT	ENSRNOG00000066010	Ig-like domain-containing protein	1	PGQSPQLLIYSVSNLESGVPNR	PGQSPQLLIYSVSNLESGVPNR	3	PGQSPQLLIYSVSNLESGVPNR3	190080	167597	158572
A0A8I6AJ98	A0A8I6AJ98	A0A8I6AJ98_RAT	ENSRNOG00000066010	Ig-like domain-containing protein	1	PGQSPQLLIYSVSNLESGVPNR	PGQSPQLLIYSVSNLESGVPNR	4	PGQSPQLLIYSVSNLESGVPNR4	6538.6	7305.59	5296
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	PGSAPLHR	PGSAPLHR	2	PGSAPLHR2	13096.7		4901.25
D4AEL8	D4AEL8	D4AEL8_RAT	Cep131	Centrosomal protein 131	1	PGSASAAK	PGSASAAK	1	PGSASAAK1			2917.31
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	PGSDPMKPDATMVVK	PGSDPMKPDATMVVK	2	PGSDPMKPDATMVVK2	5999.08	3164.42	1584.55
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	PGSDPMKPDATMVVK	PGSDPMKPDATMVVK	3	PGSDPMKPDATMVVK3	166826	124148	154989
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	PGSDTCQGDSGGPLTCEK	PGSDTC(UniMod:4)QGDSGGPLTC(UniMod:4)EK	2	PGSDTC(UniMod:4)QGDSGGPLTC(UniMod:4)EK2	464501	408919	428344
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	PGSDTCQGDSGGPLTCEK	PGSDTC(UniMod:4)QGDSGGPLTC(UniMod:4)EK	3	PGSDTC(UniMod:4)QGDSGGPLTC(UniMod:4)EK3	187341	236424	257095
P35704	P35704	PRDX2_RAT	Prdx2	Peroxiredoxin-2	1	PGSDTIKPNVDDSK	PGSDTIKPNVDDSK	3	PGSDTIKPNVDDSK3	15714.7	17418.6	16201.7
D4A0T9	D4A0T9	D4A0T9_RAT	Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	1	PGSFEDCSPEPCPAR	PGSFEDC(UniMod:4)SPEPC(UniMod:4)PAR	2	PGSFEDC(UniMod:4)SPEPC(UniMod:4)PAR2	3763.84	4423.24	6334.04
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	PGSFLLTSTSGR	PGSFLLTSTSGR	2	PGSFLLTSTSGR2	12315.8	10853.9	10323.6
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	PGSGFTNTMR	PGSGFTNTMR	2	PGSGFTNTMR2	12374.2	10518	7664.71
F1M1D2	F1M1D2	F1M1D2_RAT	Tab3	TGF-beta activated kinase 1/MAP3K7 binding protein 3	1	PGSHSVAYLPYAASSLPK	PGSHSVAYLPYAASSLPK	3	PGSHSVAYLPYAASSLPK3	2895.72	9049.22	8634.73
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	PGSIDSNNQLFAPGGR	PGSIDSNNQLFAPGGR	2	PGSIDSNNQLFAPGGR2	14128.8	16948.8	21440.3
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PGSPPREVVPR	PGSPPREVVPR	3	PGSPPREVVPR3	27450.3	52263.3	42845.8
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	PGSPVPGSER	PGSPVPGSER	2	PGSPVPGSER2	15222.5	12605	7527.99
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	PGSSGLTSGPNSILSR	PGSSGLTSGPNSILSR	2	PGSSGLTSGPNSILSR2	12150	10544.6	3388.96
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	PGSSHRPWQSYFDLILVDAR	PGSSHRPWQSYFDLILVDAR	3	PGSSHRPWQSYFDLILVDAR3	5957.99	10718.1	
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	PGSSHRPWQSYFDLILVDAR	PGSSHRPWQSYFDLILVDAR	4	PGSSHRPWQSYFDLILVDAR4	32006.9	40573.9	29489
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	PGSTPPVPENDLKPGFSK	PGSTPPVPENDLKPGFSK	2	PGSTPPVPENDLKPGFSK2	6321.49	4094.9	10400.9
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	PGSTPPVPENDLKPGFSK	PGSTPPVPENDLKPGFSK	3	PGSTPPVPENDLKPGFSK3	573792	494379	542144
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	PGSTPSRPSSAK	PGSTPSRPSSAK	2	PGSTPSRPSSAK2			16631.2
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	PGSTPSRPSSAK	PGSTPSRPSSAK	3	PGSTPSRPSSAK3			104839
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	PGTAGPTGAQYTPHSHQFPR	PGTAGPTGAQYTPHSHQFPR	4	PGTAGPTGAQYTPHSHQFPR4			4836.74
A0A8I6AGD6	A0A8I6AGD6	A0A8I6AGD6_RAT	Elapor2	Endosome-lysosome associated apoptosis and autophagy regulator family member 2	1	PGTFSNK	PGTFSNK	1	PGTFSNK1	11461.5	10293.1	16983.1
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	PGTLLWHVSNQR	PGTLLWHVSNQR	3	PGTLLWHVSNQR3	83920.8	58366.5	57817.5
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	PGTLVQCLR	PGTLVQC(UniMod:4)LR	2	PGTLVQC(UniMod:4)LR2	9974.41	2309.88	12646.3
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	PGTMSAQAFLEEANLMK	PGTMSAQAFLEEANLMK	2	PGTMSAQAFLEEANLMK2	6347.12	11325	5576.95
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	PGTMSAQAFLEEANLMK	PGTMSAQAFLEEANLMK	3	PGTMSAQAFLEEANLMK3	3571.58	8910.54	8821.24
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	PGTTPPKPSLTK	PGTTPPKPSLTK	3	PGTTPPKPSLTK3	11159.9	15293.9	15109.9
D3ZSY8	D3ZSY8	D3ZSY8_RAT	Tbc1d10b	TBC1 domain family, member 10b	1	PGTTVASGVTAR	PGTTVASGVTAR	2	PGTTVASGVTAR2	13914.5	13498.8	9372.56
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	PGTVLSLIQDPVTGIAVTGQIIGEK	PGTVLSLIQDPVTGIAVTGQIIGEK	3	PGTVLSLIQDPVTGIAVTGQIIGEK3		2582.46	5762.82
A0A8I6G6W8	A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	PGVAAPPEVAPAPK	PGVAAPPEVAPAPK	2	PGVAAPPEVAPAPK2	37111	33280.7	31035.8
Q5XIC0	Q5XIC0	ECI2_RAT	Eci2	Enoyl-CoA delta isomerase 2	1	PGVFDFVNK	PGVFDFVNK	2	PGVFDFVNK2	23875.6	15428.4	13592.4
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	PGVHALQLEPPTVVETLR	PGVHALQLEPPTVVETLR	3	PGVHALQLEPPTVVETLR3	100948	124896	101932
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	PGVHALQLEPPTVVETLRR	PGVHALQLEPPTVVETLRR	4	PGVHALQLEPPTVVETLRR4	9577.94	17422.3	17383.7
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	PGVHETLNEIQQQLQLLDNR	PGVHETLNEIQQQLQLLDNR	3	PGVHETLNEIQQQLQLLDNR3	16202.1	19792.7	17991.7
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	PGVHETLNEIQQQLQLLDNR	PGVHETLNEIQQQLQLLDNR	4	PGVHETLNEIQQQLQLLDNR4	5954.74	1274.18	5165.53
Q6AXQ4	Q6AXQ4	MTM1_RAT	Mtm1	Myotubularin	1	PGVNAVANK	PGVNAVANK	2	PGVNAVANK2	5992.52	3334.07	
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	PGVPMEIVLNK	PGVPMEIVLNK	2	PGVPMEIVLNK2	90390.5	79003.8	74336.9
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	PGVQCIPQR	PGVQC(UniMod:4)IPQR	2	PGVQC(UniMod:4)IPQR2	7970.31	7481.06	5061.48
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	PGVSETFSSHDDINNYLQQLDQLK	PGVSETFSSHDDINNYLQQLDQLK	3	PGVSETFSSHDDINNYLQQLDQLK3	11407.2	9363.44	8107.22
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	PGVSGHGVYELK	PGVSGHGVYELK	3	PGVSGHGVYELK3	7187.88	10711.3	4946.45
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PGVTEATITGLEPGTEYTIYVIALK	PGVTEATITGLEPGTEYTIYVIALK	3	PGVTEATITGLEPGTEYTIYVIALK3	1.5471e+06	1.63389e+06	1.46338e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PGVTEATITGLEPGTEYTIYVIALK	PGVTEATITGLEPGTEYTIYVIALK	4	PGVTEATITGLEPGTEYTIYVIALK4	57061.5	53383.1	48757.8
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PGVTEATITGLEPGTEYTIYVIALKNNQK	PGVTEATITGLEPGTEYTIYVIALKNNQK	4	PGVTEATITGLEPGTEYTIYVIALKNNQK4	10389.2	19614	18046.2
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	PGVTFTSAK	PGVTFTSAK	2	PGVTFTSAK2	126358	108383	100977
Q6AYD4	Q6AYD4	ESAM_RAT	Esam	Endothelial cell-selective adhesion molecule	1	PGVTLVHSISTR	PGVTLVHSISTR	2	PGVTLVHSISTR2		1782.64	
Q6AYD4	Q6AYD4	ESAM_RAT	Esam	Endothelial cell-selective adhesion molecule	1	PGVTLVHSISTR	PGVTLVHSISTR	3	PGVTLVHSISTR3	9166.56		
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	PGVVPGCEPCR	PGVVPGC(UniMod:4)EPC(UniMod:4)R	2	PGVVPGC(UniMod:4)EPC(UniMod:4)R2	13277	5974.68	7699.15
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	PGVVPGCEPCRK	PGVVPGC(UniMod:4)EPC(UniMod:4)RK	3	PGVVPGC(UniMod:4)EPC(UniMod:4)RK3	14247.2	9981.34	8654.59
Q5I0D7	Q5I0D7	PEPD_RAT	Pepd	Xaa-Pro dipeptidase	1	PGVWWPDMHR	PGVWWPDMHR	3	PGVWWPDMHR3	7230.95	12427.4	12858.7
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	PGVYTQVTK	PGVYTQVTK	2	PGVYTQVTK2	629628	707080	689547
D3ZXK7	D3ZXK7	RN123_RAT	Rnf123	E3 ubiquitin-protein ligase RNF123	1	PGWLSSPTLGR	PGWLSSPTLGR	2	PGWLSSPTLGR2	2031.12	4622.49	2010.92
Q5BQE6	Q5BQE6	DHC24_RAT	Dhcr24	Delta(24)-sterol reductase	1	PGWLTVSLR	PGWLTVSLR	2	PGWLTVSLR2	9130.97	12227	8110.86
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	PGWWLLDTAVGENQIAGMQTPFLIIDK	PGWWLLDTAVGENQIAGMQTPFLIIDK	4	PGWWLLDTAVGENQIAGMQTPFLIIDK4	2916.88		
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	PGWWLLDTAVGENQIAGMQTPFLIIDKECK	PGWWLLDTAVGENQIAGMQTPFLIIDKEC(UniMod:4)K	4	PGWWLLDTAVGENQIAGMQTPFLIIDKEC(UniMod:4)K4	11601.3	12945.4	7681.96
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	PGYEPATR	PGYEPATR	2	PGYEPATR2	3.23395e+06	3.47845e+06	3.58973e+06
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	PGYGAYDAFK	PGYGAYDAFK	2	PGYGAYDAFK2	1943.34		
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	PGYIIQGSSDLICTEK	PGYIIQGSSDLIC(UniMod:4)TEK	2	PGYIIQGSSDLIC(UniMod:4)TEK2	18249.2	18485	11705.1
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	PGYTGDQTR	PGYTGDQTR	2	PGYTGDQTR2	160330		136346
Q1RP74	Q1RP74	Q1RP74_RAT	Tbcb	Tubulin folding cofactor B	1	PGYWVGVR	PGYWVGVR	2	PGYWVGVR2	20805	21415.6	21645.4
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	PHCVCQDPETCPPAK	PHC(UniMod:4)VC(UniMod:4)QDPETC(UniMod:4)PPAK	3	PHC(UniMod:4)VC(UniMod:4)QDPETC(UniMod:4)PPAK3	91275.7	78559.8	90053.5
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	PHDHITLPRPQSAPR	PHDHITLPRPQSAPR	4	PHDHITLPRPQSAPR4	16590.4	19021	
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PHETGGYMLECLCLGNGK	PHETGGYMLEC(UniMod:4)LC(UniMod:4)LGNGK	3	PHETGGYMLEC(UniMod:4)LC(UniMod:4)LGNGK3	18590.9	14810.5	14194.8
Q63632	Q63632	S12A4_RAT	Slc12a4	Solute carrier family 12 member 4	1	PHFTVVPVDGPR	PHFTVVPVDGPR	3	PHFTVVPVDGPR3	8348.27	13550.2	15045.7
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	PHGLGHGHQLK	PHGLGHGHQLK	2	PHGLGHGHQLK2			43853.9
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	PHGLGHGHQLK	PHGLGHGHQLK	3	PHGLGHGHQLK3			274250
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	PHIVELLTR	PHIVELLTR	2	PHIVELLTR2	8042.25	2549.45	7927.12
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	PHLEAIVENLR	PHLEAIVENLR	3	PHLEAIVENLR3	1588.69		9449.86
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	PHLLSSLDDMSLFR	PHLLSSLDDMSLFR	3	PHLLSSLDDMSLFR3	6393.89	6712.66	5453.62
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	PHLMSQELPEDWDKQPVK	PHLMSQELPEDWDKQPVK	3	PHLMSQELPEDWDKQPVK3	21933.5	25507.8	28093
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	PHLMSQELPEDWDKQPVK	PHLMSQELPEDWDKQPVK	4	PHLMSQELPEDWDKQPVK4	8318.41	12334.5	7370.32
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	PHLQVHATPER	PHLQVHATPER	3	PHLQVHATPER3	5244.33	3647.86	5867.31
P62994	P62994	GRB2_RAT	Grb2	Growth factor receptor-bound protein 2	1	PHPWFFGK	PHPWFFGK	2	PHPWFFGK2	22266.3	15066.1	23691.7
P05065	P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	1	PHPYPALTPEQK	PHPYPALTPEQK	2	PHPYPALTPEQK2	160334	123211	154773
P05065	P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	1	PHPYPALTPEQK	PHPYPALTPEQK	3	PHPYPALTPEQK3	699732	607825	662079
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	PHSVSLNDTETR	PHSVSLNDTETR	2	PHSVSLNDTETR2	1513.42	1211.65	
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	PHSVSLNDTETR	PHSVSLNDTETR	3	PHSVSLNDTETR3	47694	36113.7	36740.5
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	PHSVSLNDTETRK	PHSVSLNDTETRK	3	PHSVSLNDTETRK3	23125.4	18558.8	14491
P09117	P09117	ALDOC_RAT	Aldoc	Fructose-bisphosphate aldolase C	1	PHSYPALSAEQK	PHSYPALSAEQK	3	PHSYPALSAEQK3	15368	11220.7	7647.61
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	PHVAYFVPMSK	PHVAYFVPMSK	3	PHVAYFVPMSK3	3819.98	4818.76	5170.22
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	PHVNVGTIGHVDHGK	PHVNVGTIGHVDHGK	3	PHVNVGTIGHVDHGK3	16108.3	3324.76	3473.01
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	PHVNVGTIGHVDHGK	PHVNVGTIGHVDHGK	4	PHVNVGTIGHVDHGK4	151558	52151.9	24959.3
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	PHVQPQSVSSANTQPR	PHVQPQSVSSANTQPR	2	PHVQPQSVSSANTQPR2	91389	63867.9	66281.3
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	PHVQPQSVSSANTQPR	PHVQPQSVSSANTQPR	3	PHVQPQSVSSANTQPR3	456678	418559	447739
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	PHVWTVDLNNREEVEDAVK	PHVWTVDLNNREEVEDAVK	4	PHVWTVDLNNREEVEDAVK4	11403	5559.86	12567.6
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	PHYGSVLDNER	PHYGSVLDNER	3	PHYGSVLDNER3	13615.2		
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	PIAGQVVTALGR	PIAGQVVTALGR	2	PIAGQVVTALGR2		4045.6	4034.41
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	PIANAQPIETQK	PIANAQPIETQK	2	PIANAQPIETQK2	20124.1	19790.3	18212.9
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	PICHTIK	PIC(UniMod:4)HTIK	1	PIC(UniMod:4)HTIK1			8472.36
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	PICHTIK	PIC(UniMod:4)HTIK	2	PIC(UniMod:4)HTIK2			48647.6
P81155	P81155	VDAC2_RAT	Vdac2	Voltage-dependent anion-selective channel protein 2	1	PICIPPPYADLGK	PIC(UniMod:4)IPPPYADLGK	2	PIC(UniMod:4)IPPPYADLGK2	82888.5	105309	102496
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	PICLPCTVGANMALR	PIC(UniMod:4)LPC(UniMod:4)TVGANMALR	2	PIC(UniMod:4)LPC(UniMod:4)TVGANMALR2	76880.7	75203.6	40533.4
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	PICLPCTVGANMALR	PIC(UniMod:4)LPC(UniMod:4)TVGANMALR	3	PIC(UniMod:4)LPC(UniMod:4)TVGANMALR3	1990.68	2922.26	4335.49
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	PIDQNFQSVSYR	PIDQNFQSVSYR	2	PIDQNFQSVSYR2	7255.26	4165.59	5074.26
Q4V7C7	Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	1	PIDVQVITHHMQR	PIDVQVITHHMQR	3	PIDVQVITHHMQR3	76041.1	42171.2	52699.1
Q4V7C7	Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	1	PIDVQVITHHMQR	PIDVQVITHHMQR	4	PIDVQVITHHMQR4	230439	168757	181398
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	PIECPEPK	PIEC(UniMod:4)PEPK	2	PIEC(UniMod:4)PEPK2	5297.99	3412.91	5160.87
A0A8I5ZMG6	A0A8I5ZMG6	A0A8I5ZMG6_RAT	Ppp2r5e	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	PIELTPLPLLK	PIELTPLPLLK	2	PIELTPLPLLK2	3014.26	127.492	1062
P20069	P20069	MPPA_RAT	Pmpca	Mitochondrial-processing peptidase subunit alpha	1	PIFATVDGQEK	PIFATVDGQEK	2	PIFATVDGQEK2	9765.36	5229.24	2615.44
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	PIFGSLHHVPDLSCR	PIFGSLHHVPDLSC(UniMod:4)R	3	PIFGSLHHVPDLSC(UniMod:4)R3	31705.5	23823	15047.3
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	PIFGSLHHVPDLSCR	PIFGSLHHVPDLSC(UniMod:4)R	4	PIFGSLHHVPDLSC(UniMod:4)R4	28154	24932.1	24275.2
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	PIFITVK	PIFITVK	2	PIFITVK2	5042.45	2612.15	
P53987	P53987	MOT1_RAT	Slc16a1	Monocarboxylate transporter 1	1	PIGPQQGK	PIGPQQGK	2	PIGPQQGK2	89055.7	70594.6	90354.4
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	PIGVVNPK	PIGVVNPK	2	PIGVVNPK2	12260	7495.19	8778.61
P67779	P67779;A0A8I5ZJB1;A0A8I5ZUY9	PHB1_RAT	Phb1	Prohibitin 1	0	PIIFDCR	PIIFDC(UniMod:4)R	2	PIIFDC(UniMod:4)R2	28379.4	18823.1	18501.4
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	PIKPSPPYFGLLLASVGR	PIKPSPPYFGLLLASVGR	3	PIKPSPPYFGLLLASVGR3	160618	166023	137452
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	PILDVPYWNAK	PILDVPYWNAK	2	PILDVPYWNAK2	7270.39	10134.1	2714.79
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	PILHGLCTFGFSAR	PILHGLC(UniMod:4)TFGFSAR	3	PILHGLC(UniMod:4)TFGFSAR3	3728.49	4402.7	2959.3
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	PILLQGHER	PILLQGHER	2	PILLQGHER2	23861.7	7653.72	16678.1
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	PILQGFR	PILQGFR	2	PILQGFR2	19783.1	15526.1	20521.9
Q6MG59	Q6MG59	G6B_RAT	Mpig6b	Megakaryocyte and platelet inhibitory receptor G6b	1	PILWASSSGTPTVLQHFSGR	PILWASSSGTPTVLQHFSGR	3	PILWASSSGTPTVLQHFSGR3	39638.9	41260.1	45157.3
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	PILYSNWLSK	PILYSNWLSK	2	PILYSNWLSK2	111864	128405	103117
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	PIMHHPPSQIDDLETQWGVGSSPQR	PIMHHPPSQIDDLETQWGVGSSPQR	4	PIMHHPPSQIDDLETQWGVGSSPQR4	10191.8	8599.57	3918.43
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	PINPTDESTFPVGTSLK	PINPTDESTFPVGTSLK	2	PINPTDESTFPVGTSLK2	149266	138081	145550
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	PINPTDESTFPVGTSLK	PINPTDESTFPVGTSLK	3	PINPTDESTFPVGTSLK3	62142.5	101803	120117
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	PIPESEFSSSPLQVSTSLVPHR	PIPESEFSSSPLQVSTSLVPHR	3	PIPESEFSSSPLQVSTSLVPHR3	5035.56	4332.68	2371.64
P0C0T0	P0C0T0	LITAF_RAT	Litaf	Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog	1	PIQMCCPSCNK	PIQMC(UniMod:4)C(UniMod:4)PSC(UniMod:4)NK	2	PIQMC(UniMod:4)C(UniMod:4)PSC(UniMod:4)NK2	4946.94	5714.96	3098.35
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	PIRPGQHPAASPTHPGAVR	PIRPGQHPAASPTHPGAVR	4	PIRPGQHPAASPTHPGAVR4	21387.4	22124.8	14671.7
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	PISADSAIMNPASK	PISADSAIMNPASK	2	PISADSAIMNPASK2	9522.92	14102.3	2507.61
M0R3L8	M0R3L8	M0R3L8_RAT	Gba	Glucosylceramidase	1	PISLFASPWTSPTWLK	PISLFASPWTSPTWLK	2	PISLFASPWTSPTWLK2	16444.8	9073.09	18953.3
M0R3L8	M0R3L8	M0R3L8_RAT	Gba	Glucosylceramidase	1	PISLFASPWTSPTWLK	PISLFASPWTSPTWLK	3	PISLFASPWTSPTWLK3	3574.42	4030.79	4023.52
D4AEK9	D4AEK9	D4AEK9_RAT	Ccdc6	Coiled-coil domain containing 6	1	PISPGLSYASHTVGFTPPTSLTR	PISPGLSYASHTVGFTPPTSLTR	3	PISPGLSYASHTVGFTPPTSLTR3		9676.04	6983.83
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	PISQGGIHGR	PISQGGIHGR	2	PISQGGIHGR2	2888.38	16411.6	10734.2
D4A8B0	D4A8B0	D4A8B0_RAT	Sec14l5	SEC14-like lipid binding 5	1	PISSWTCLLDLEGLNMR	PISSWTC(UniMod:4)LLDLEGLNMR	3	PISSWTC(UniMod:4)LLDLEGLNMR3		2995.05	
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	PISWEELLQ	PISWEELLQ	2	PISWEELLQ2	14522.8	22167.9	11114.2
P04797	A0A0G2K7M1;M0R660;A0A8I6A1X7;M0R7H7;E9PTV9;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	PITIFQER	PITIFQER	2	PITIFQER2	333968	224647	226009
P04797	A0A0G2K7M1;M0R660;A0A8I6A1X7;M0R7H7;E9PTV9;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	PITIFQERDPANIK	PITIFQERDPANIK	2	PITIFQERDPANIK2	22412	19378.3	13369.3
P04797	A0A0G2K7M1;M0R660;A0A8I6A1X7;M0R7H7;E9PTV9;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	PITIFQERDPANIK	PITIFQERDPANIK	3	PITIFQERDPANIK3	504206	408142	415392
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	PIVFIIHSFLSAK	PIVFIIHSFLSAK	3	PIVFIIHSFLSAK3	2432.63	1702.98	
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	PIVPGGIINPGSRPPFK	PIVPGGIINPGSRPPFK	3	PIVPGGIINPGSRPPFK3	25906.2	16384.4	29815.1
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	PIWLQIAESAYR	PIWLQIAESAYR	2	PIWLQIAESAYR2	20855.8	19233.5	17632.7
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	PIWLQIAESAYR	PIWLQIAESAYR	3	PIWLQIAESAYR3	5666.36	2713.01	1563.78
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	PIYKPGQTVK	PIYKPGQTVK	2	PIYKPGQTVK2	11344	7062.75	
P47824	P47824	P2RX1_RAT	P2rx1	P2X purinoceptor 1	1	PIYQFHGLYGEK	PIYQFHGLYGEK	3	PIYQFHGLYGEK3	11499.8	16009.9	15813.5
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	PKDPNNLLNDWSQK	PKDPNNLLNDWSQK	3	PKDPNNLLNDWSQK3	11946.6	12640.8	11237.5
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	PKEPSAAPAR	PKEPSAAPAR	2	PKEPSAAPAR2			29963.6
Q6AY63	Q6AY63	NUDT5_RAT	Nudt5	ADP-sugar pyrophosphatase	1	PKPGDGEFVEVISLPK	PKPGDGEFVEVISLPK	3	PKPGDGEFVEVISLPK3	18527.3	11187.4	15093.6
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	PKPGEEEFSIVLEK	PKPGEEEFSIVLEK	2	PKPGEEEFSIVLEK2	90968	100109	79302.5
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	PKPGEEEFSIVLEK	PKPGEEEFSIVLEK	3	PKPGEEEFSIVLEK3	434000	514074	410718
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	PKPGEEEFSIVLEKDSAGEPQR	PKPGEEEFSIVLEKDSAGEPQR	4	PKPGEEEFSIVLEKDSAGEPQR4	25522.1	23170.4	14750.5
Q3T1I9	Q3T1I9	RPAP1_RAT	Rpap1	RNA polymerase II-associated protein 1	1	PKPGESEVDLLR	PKPGESEVDLLR	3	PKPGESEVDLLR3	10009.7	13972.4	8158.5
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	PKPIDQNFQSVSYR	PKPIDQNFQSVSYR	3	PKPIDQNFQSVSYR3	3826.51	15814.2	16339.7
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	PKPRPPTDICSCDDNLGR	PKPRPPTDIC(UniMod:4)SC(UniMod:4)DDNLGR	4	PKPRPPTDIC(UniMod:4)SC(UniMod:4)DDNLGR4		6762.01	4241.42
Q6AYU2	Q6AYU2	Q6AYU2_RAT	Pcbp2	Poly(rC) binding protein 2	1	PKPSSSPVIFAGGQDR	PKPSSSPVIFAGGQDR	3	PKPSSSPVIFAGGQDR3	6150.45		2552.61
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	PLAADDLR	PLAADDLR	2	PLAADDLR2	7353.08	8109.86	5991.68
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	PLAEIDSIELSYGIK	PLAEIDSIELSYGIK	2	PLAEIDSIELSYGIK2	71684.4	50855	59723.2
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	PLAEIDSIELSYGIK	PLAEIDSIELSYGIK	3	PLAEIDSIELSYGIK3	24629.3	36045.5	25403.3
P04041	P04041	GPX1_RAT	Gpx1	Glutathione peroxidase 1	1	PLAGGEPVSLGSLR	PLAGGEPVSLGSLR	2	PLAGGEPVSLGSLR2	200371	203427	204902
P04041	P04041	GPX1_RAT	Gpx1	Glutathione peroxidase 1	1	PLAGGEPVSLGSLR	PLAGGEPVSLGSLR	3	PLAGGEPVSLGSLR3	4397.74	4355.72	1534.91
P0C5H9	P0C5H9	MANF_RAT	Manf	Mesencephalic astrocyte-derived neurotrophic factor	1	PLAHHIPVEK	PLAHHIPVEK	3	PLAHHIPVEK3	23457.6		4911.3
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	PLAPEVSIK	PLAPEVSIK	2	PLAPEVSIK2	17234.3	13448.6	11993.9
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	PLAPGQEVFADDQCQR	PLAPGQEVFADDQC(UniMod:4)QR	2	PLAPGQEVFADDQC(UniMod:4)QR2	344977	285650	277078
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	PLAPGQEVFADDQCQR	PLAPGQEVFADDQC(UniMod:4)QR	3	PLAPGQEVFADDQC(UniMod:4)QR3	817431	585119	744071
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	PLAPGQEVFADDQCQRR	PLAPGQEVFADDQC(UniMod:4)QRR	3	PLAPGQEVFADDQC(UniMod:4)QRR3	120770	183518	183494
D3Z8E0	D3Z8E0	D3Z8E0_RAT	Rps6ka3	Ribosomal protein S6 kinase	1	PLAQLADPWQK	PLAQLADPWQK	2	PLAQLADPWQK2	11430	8659.73	6936.7
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	PLATTQPAK	PLATTQPAK	2	PLATTQPAK2	40421.1	46218.3	40690.8
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	PLAYPLEIR	PLAYPLEIR	2	PLAYPLEIR2	4368.17	4967.92	8268.15
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	PLCENHFHAQR	PLC(UniMod:4)ENHFHAQR	3	PLC(UniMod:4)ENHFHAQR3	8731.76	7852.47	9139.58
B0BNN4	B0BNN4	B0BNN4_RAT	Cfp	Complement factor properdin	1	PLCEVLQGQK	PLC(UniMod:4)EVLQGQK	2	PLC(UniMod:4)EVLQGQK2	74826.5	58863.2	53692
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	PLCHSEDEK	PLC(UniMod:4)HSEDEK	2	PLC(UniMod:4)HSEDEK2	18746		20234.5
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	PLDAEQK	PLDAEQK	2	PLDAEQK2	9291.95		
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	PLDPGEGSK	PLDPGEGSK	2	PLDPGEGSK2	168454	212163	187545
P05942	P05942	S10A4_RAT	S100a4	Protein S100-A4	1	PLEEALDVIVSTFHK	PLEEALDVIVSTFHK	2	PLEEALDVIVSTFHK2	11933.4	13743.2	12424.1
P05942	P05942	S10A4_RAT	S100a4	Protein S100-A4	1	PLEEALDVIVSTFHK	PLEEALDVIVSTFHK	3	PLEEALDVIVSTFHK3	322063	285428	250892
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	PLEGADDFRLEDITEALR	PLEGADDFRLEDITEALR	3	PLEGADDFRLEDITEALR3	7687.3	12884.7	17907.3
B1WC26	B1WC26	B1WC26_RAT	Nans	N-acetylneuraminate synthase	1	PLELELCPGR	PLELELC(UniMod:4)PGR	2	PLELELC(UniMod:4)PGR2	12483.4	3778.11	6433.29
P62250	P62250;A0A8I5YCD9;A0A8I5ZY61	RS16_RAT	Rps16	Small ribosomal subunit protein uS9	0	PLEMIEPR	PLEMIEPR	2	PLEMIEPR2	4321.42	3889.98	
A0A0G2K9K4	A0A0G2K9K4	A0A0G2K9K4_RAT	Tfg	Trafficking from ER to golgi regulator	1	PLESSQVK	PLESSQVK	2	PLESSQVK2	82312.7	80822.3	70125.8
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	PLESTPPPHVIR	PLESTPPPHVIR	2	PLESTPPPHVIR2	358347	405600	339799
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	PLESTPPPHVIR	PLESTPPPHVIR	3	PLESTPPPHVIR3		157636	168636
Q63584	Q63584	TMEDA_RAT	Tmed10	Transmembrane emp24 domain-containing protein 10	1	PLEVELR	PLEVELR	2	PLEVELR2	27155.3	21858.5	16416.9
Q5HZY2	Q5HZY2	SAR1B_RAT	Sar1b	GTP-binding protein SAR1b	1	PLEVFMCSVLK	PLEVFMC(UniMod:4)SVLK	2	PLEVFMC(UniMod:4)SVLK2	82816.4	64329.3	65285.2
Q4QQU5	Q4QQU5	YIPF6_RAT	Yipf6	Protein YIPF6	1	PLFAGLSDVSISQDIPIEGEITIPSGTR	PLFAGLSDVSISQDIPIEGEITIPSGTR	3	PLFAGLSDVSISQDIPIEGEITIPSGTR3	7388.74	8888.02	8990.79
B5DF55	B5DF55	B5DF55_RAT	Stam	Signal transducing adaptor molecule	1	PLFATNPFDQDVEK	PLFATNPFDQDVEK	2	PLFATNPFDQDVEK2	19702	15918	22473
Q03114	Q03114	CDK5_RAT	Cdk5	Cyclin-dependent kinase 5	1	PLFPGNDVDDQLKR	PLFPGNDVDDQLKR	3	PLFPGNDVDDQLKR3	10748.6	5924.85	
Q6IMY8	Q6IMY8	HNRPU_RAT	Hnrnpu	Heterogeneous nuclear ribonucleoprotein U	1	PLFPHVLCHNCAVEFNFGQK	PLFPHVLC(UniMod:4)HNC(UniMod:4)AVEFNFGQK	4	PLFPHVLC(UniMod:4)HNC(UniMod:4)AVEFNFGQK4	4230.51		
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	PLFQTVAAICR	PLFQTVAAIC(UniMod:4)R	2	PLFQTVAAIC(UniMod:4)R2	139802	115197	111826
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	PLFQTVAAICR	PLFQTVAAIC(UniMod:4)R	3	PLFQTVAAIC(UniMod:4)R3	8442.59	11628.1	10552.7
Q5XHY7	Q5XHY7	STAM2_RAT	Stam2	Signal transducing adapter molecule 2	1	PLFTANPFEQDVEK	PLFTANPFEQDVEK	2	PLFTANPFEQDVEK2	13824.2	11229.4	11435.5
D3ZVN7	D3ZVN7	D3ZVN7_RAT	Ppox	Amine oxidase	1	PLFWAGLR	PLFWAGLR	2	PLFWAGLR2	6218.98	7425.06	5992.55
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	PLGCCMILIGIDEEQGPQVYK	PLGC(UniMod:4)C(UniMod:4)MILIGIDEEQGPQVYK	3	PLGC(UniMod:4)C(UniMod:4)MILIGIDEEQGPQVYK3	60670.3	44000.8	38185.2
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	PLGPTPSQSR	PLGPTPSQSR	2	PLGPTPSQSR2	7674.97	7621.99	
Q4AEG0	Q4AEG0	Q4AEG0_RAT	Gp9	Glycoprotein 9	1	PLGQLTGYELGNCGWK	PLGQLTGYELGNC(UniMod:4)GWK	2	PLGQLTGYELGNC(UniMod:4)GWK2	15857.9	22372.8	21439.9
Q4AEG0	Q4AEG0	Q4AEG0_RAT	Gp9	Glycoprotein 9	1	PLGQLTGYELGNCGWK	PLGQLTGYELGNC(UniMod:4)GWK	3	PLGQLTGYELGNC(UniMod:4)GWK3	8873.29	10269.3	12442.4
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	PLGQTLPLR	PLGQTLPLR	2	PLGQTLPLR2	7973.39	1706.68	4217.7
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	PLGSIQRPNSFLFR	PLGSIQRPNSFLFR	3	PLGSIQRPNSFLFR3	116738	107061	125321
O35264	O35264	PA1B2_RAT	Pafah1b2	Platelet-activating factor acetylhydrolase IB subunit alpha2	1	PLHELIMQLLEETPEEK	PLHELIMQLLEETPEEK	3	PLHELIMQLLEETPEEK3	9764.33	1347.47	
E9PT79	E9PT79	E9PT79_RAT	Tsn	Translin	1	PLHISTFINELDSGFR	PLHISTFINELDSGFR	2	PLHISTFINELDSGFR2	11137.1	6404.37	3150.3
E9PT79	E9PT79	E9PT79_RAT	Tsn	Translin	1	PLHISTFINELDSGFR	PLHISTFINELDSGFR	3	PLHISTFINELDSGFR3	11800.9	16146.9	13440.5
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	PLHSLSVLAFDQER	PLHSLSVLAFDQER	3	PLHSLSVLAFDQER3	15762.6	10759.5	11956.8
Q02445	Q02445	TFPI1_RAT	Tfpi	Tissue factor pathway inhibitor	1	PLHTFCAMK	PLHTFC(UniMod:4)AMK	2	PLHTFC(UniMod:4)AMK2	7651.43		5395.92
A0A8I6AC61	A0A8I6AC61;D3Z997;D3ZH49;A0A8I6G9L3;D3ZLI1	A0A8I6AC61_RAT	Or6c69b	Olfactory receptor	0	PLHYMTIMNNK	PLHYMTIMNNK	2	PLHYMTIMNNK2	2206.16		
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	PLIIYNAIDSLTR	PLIIYNAIDSLTR	2	PLIIYNAIDSLTR2	9860.17		
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	PLILNSYVTPICVANK	PLILNSYVTPIC(UniMod:4)VANK	2	PLILNSYVTPIC(UniMod:4)VANK2	46624	41607.6	40542.9
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	PLILNSYVTPICVANK	PLILNSYVTPIC(UniMod:4)VANK	3	PLILNSYVTPIC(UniMod:4)VANK3	40660.8	50571.2	44892.7
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	PLIPLQK	PLIPLQK	2	PLIPLQK2	83894.1	65559.7	68006
P50878	P50878	RL4_RAT	Rpl4	Large ribosomal subunit protein uL4	1	PLISVYSEK	PLISVYSEK	2	PLISVYSEK2	23976.8	32536.5	17241.6
Q32Q06	Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	1	PLIWIESVIEK	PLIWIESVIEK	2	PLIWIESVIEK2	5245.49	6498.57	7838.46
A0A8I6ARR5	A0A8I6ARR5;A0A8I5ZXY4	A0A8I6ARR5_RAT	ENSRNOG00000068013	Ig-like domain-containing protein	0	PLIYYTSNLQSGVPSR	PLIYYTSNLQSGVPSR	2	PLIYYTSNLQSGVPSR2	10862.6	12972.8	6085.39
A0A8I6ARR5	A0A8I6ARR5;A0A8I5ZXY4	A0A8I6ARR5_RAT	ENSRNOG00000068013	Ig-like domain-containing protein	0	PLIYYTSNLQSGVPSR	PLIYYTSNLQSGVPSR	3	PLIYYTSNLQSGVPSR3	15975.6	8809.81	13799.7
A0A0G2JT44	A0A0G2JT44	A0A0G2JT44_RAT	Tmc6	Transmembrane channel-like protein	1	PLLGNVVR	PLLGNVVR	2	PLLGNVVR2	18591.5	15858.1	16761.3
B1H274	B1H274	B1H274_RAT	Atg4a	Cysteine protease	1	PLLLIVPLR	PLLLIVPLR	2	PLLLIVPLR2	8447.31	7447.23	4676.17
D4A3E2	D4A3E2	D4A3E2_RAT	Npepl1	Aminopeptidase-like 1	1	PLLLLGQLQHLHR	PLLLLGQLQHLHR	4	PLLLLGQLQHLHR4	8726.58	12885.1	8335.98
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	PLLMVHGWPGSFYEFYK	PLLMVHGWPGSFYEFYK	3	PLLMVHGWPGSFYEFYK3	39891.5	41575.9	27380.8
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	PLLNSIR	PLLNSIR	2	PLLNSIR2	125334	85656	100137
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	PLLNSIRHEDELLAK	PLLNSIRHEDELLAK	3	PLLNSIRHEDELLAK3	119798	174941	172816
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	PLLSAEEAAK	PLLSAEEAAK	2	PLLSAEEAAK2	6757.24	7228.03	
D3ZAQ3	D3ZAQ3	D3ZAQ3_RAT	Tbx10	T-box transcription factor 10	1	PLLSIPAR	PLLSIPAR	2	PLLSIPAR2	30394.3	30335.2	22591.4
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	PLLTGLMWAQQGATPGTPPK	PLLTGLMWAQQGATPGTPPK	3	PLLTGLMWAQQGATPGTPPK3	20319.5	17376.4	14682.5
Q62991	Q62991	SCFD1_RAT	Scfd1	Sec1 family domain-containing protein 1	1	PLLVLVDR	PLLVLVDR	2	PLLVLVDR2	10719.1	13571.4	9252.38
Q62764	Q62764	YBOX3_RAT	Ybx3	Y-box-binding protein 3	1	PLNAVSQDGK	PLNAVSQDGK	2	PLNAVSQDGK2	8008.04	3881.41	5583
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	PLNIAYSHIYSSYR	PLNIAYSHIYSSYR	3	PLNIAYSHIYSSYR3	11563.5	17786.5	20479.9
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	PLNPDPPR	PLNPDPPR	2	PLNPDPPR2	23891.6	23982.3	10669
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	PLNPVPGCDR	PLNPVPGC(UniMod:4)DR	2	PLNPVPGC(UniMod:4)DR2	45765.5	37066.9	39059.2
B2RYK9	B2RYK9	B2RYK9_RAT	Dmkn	Dermokine	1	PLNYETNAQGAVAQPGYGAVR	PLNYETNAQGAVAQPGYGAVR	3	PLNYETNAQGAVAQPGYGAVR3	2643.54	4077.75	1884.43
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	PLPAELR	PLPAELR	2	PLPAELR2	129696	112400	80521.4
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	PLPEGVDPLK	PLPEGVDPLK	2	PLPEGVDPLK2	51710.7	40212.3	41012.8
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	PLPGETMEK	PLPGETMEK	2	PLPGETMEK2	210002	189391	207412
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	PLPLSPEEGYVSAK	PLPLSPEEGYVSAK	2	PLPLSPEEGYVSAK2	6021.86	7723.65	3249.48
M0R8A3	M0R8A3	M0R8A3_RAT	Gp6	Glycoprotein 6 (platelet)	1	PLPPLPLA	PLPPLPLA	2	PLPPLPLA2	42320.8	35398.1	40387.4
A0A8I5ZUT2	A0A8I5ZUT2	A0A8I5ZUT2_RAT	Irgq	Immunity-related GTPase Q	1	PLPQGDVTALFLGPPGSGK	PLPQGDVTALFLGPPGSGK	2	PLPQGDVTALFLGPPGSGK2	18396.4	21825.6	17235.6
A0A8I5ZUT2	A0A8I5ZUT2	A0A8I5ZUT2_RAT	Irgq	Immunity-related GTPase Q	1	PLPQGDVTALFLGPPGSGK	PLPQGDVTALFLGPPGSGK	3	PLPQGDVTALFLGPPGSGK3	10047.4	8768.77	12023.4
M0R402	M0R402	M0R402_RAT	Tmx3	Thioredoxin-related transmembrane protein 3	1	PLPSQQMFDHVR	PLPSQQMFDHVR	3	PLPSQQMFDHVR3	22996.5	16312.3	20330.9
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	PLPTCHPVSCNEPPK	PLPTC(UniMod:4)HPVSC(UniMod:4)NEPPK	3	PLPTC(UniMod:4)HPVSC(UniMod:4)NEPPK3	46871.1	44240.6	55348.7
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	PLPVVTWER	PLPVVTWER	2	PLPVVTWER2		7245.76	2414.14
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	PLQCPIPALPVCVPER	PLQC(UniMod:4)PIPALPVC(UniMod:4)VPER	2	PLQC(UniMod:4)PIPALPVC(UniMod:4)VPER2	109648	82835.1	97505.5
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	PLQCPIPALPVCVPER	PLQC(UniMod:4)PIPALPVC(UniMod:4)VPER	3	PLQC(UniMod:4)PIPALPVC(UniMod:4)VPER3	122714	123507	106777
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	PLQCPIPALPVCVPERDFAEHVLIPGTK	PLQC(UniMod:4)PIPALPVC(UniMod:4)VPERDFAEHVLIPGTK	4	PLQC(UniMod:4)PIPALPVC(UniMod:4)VPERDFAEHVLIPGTK4	99450.3	113947	142724
Q925N6	Q925N6	IGSF1_RAT	Igsf1	Immunoglobulin superfamily member 1	1	PLQFLDATSNTGNNSFFLK	PLQFLDATSNTGNNSFFLK	3	PLQFLDATSNTGNNSFFLK3	81779.8	108187	121683
Q641Y0	Q641Y0	OST48_RAT	Ddost	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit	1	PLQHTQYER	PLQHTQYER	3	PLQHTQYER3	11757.5	12094.5	8350.19
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	PLQLTLQACDVK	PLQLTLQAC(UniMod:4)DVK	2	PLQLTLQAC(UniMod:4)DVK2	10006.6	7341.45	2878.23
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	PLQPSAPR	PLQPSAPR	2	PLQPSAPR2	190492	146332	177101
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	PLQTQDSER	PLQTQDSER	2	PLQTQDSER2			4689.52
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	PLRPIVVK	PLRPIVVK	2	PLRPIVVK2	9348.47	10978.3	8355.56
D3ZE16	D3ZE16	D3ZE16_RAT	Idua	Alpha-L-iduronidase	1	PLRPLLPFWR	PLRPLLPFWR	3	PLRPLLPFWR3	2507.04	8141.29	8032.58
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	PLSDYYAYRPVR	PLSDYYAYRPVR	3	PLSDYYAYRPVR3	58677.9	58383.9	58197.3
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	PLSIHPQGIR	PLSIHPQGIR	2	PLSIHPQGIR2	595518	591212	564383
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	PLSIWAMQLALQQQQHK	PLSIWAMQLALQQQQHK	3	PLSIWAMQLALQQQQHK3	19297.7	19857.2	27940.1
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	PLSLIQGPPGTGK	PLSLIQGPPGTGK	2	PLSLIQGPPGTGK2	2311.36	7162.65	5699.55
Q68FW9	Q68FW9	CSN3_RAT	Cops3	COP9 signalosome complex subunit 3	1	PLSNAYHELAQVYSTNNPSELR	PLSNAYHELAQVYSTNNPSELR	3	PLSNAYHELAQVYSTNNPSELR3	3257.72	2740.99	2845.34
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	PLSPSALIAVEIK	PLSPSALIAVEIK	2	PLSPSALIAVEIK2	618964	489987	368613
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	PLSPSALIAVEIK	PLSPSALIAVEIK	3	PLSPSALIAVEIK3	85277.3	80250.6	41505.9
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	PLSPSALIAVEIKGPTHHFIK	PLSPSALIAVEIKGPTHHFIK	4	PLSPSALIAVEIKGPTHHFIK4	26689.8	16314.3	10152.4
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	PLSPSLR	PLSPSLR	2	PLSPSLR2	98199.8	91294.1	76756.5
Q64303	Q64303;Q62829	PAK2_RAT	Pak2	Serine/threonine-protein kinase PAK 2	0	PLSSLTPLILAAK	PLSSLTPLILAAK	2	PLSSLTPLILAAK2	5494.65	5922.89	
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	PLSTLISSSQSCQYTLEPK	PLSTLISSSQSC(UniMod:4)QYTLEPK	3	PLSTLISSSQSC(UniMod:4)QYTLEPK3	79872.8	86811.1	71045.6
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	PLSVYSHK	PLSVYSHK	2	PLSVYSHK2	21720.7	10491.5	8584.9
Q63433	Q63433	PKN1_RAT	Pkn1	Serine/threonine-protein kinase N1	1	PLTAAEQAAFR	PLTAAEQAAFR	2	PLTAAEQAAFR2	6464.76	7416.13	4890.78
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PLTAQQTTK	PLTAQQTTK	2	PLTAQQTTK2	46579.8		3.52298e+06
D3ZXJ5	D3ZXJ5	D3ZXJ5_RAT	Efl1	Elongation factor like GTPase 1	1	PLTQEEMAQR	PLTQEEMAQR	2	PLTQEEMAQR2	3492.52	3735.48	3921.24
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	PLTQVGGDHIK	PLTQVGGDHIK	3	PLTQVGGDHIK3	17458.6	15040.1	16139.5
Q9Z269	Q9Z269	VAPB_RAT	Vapb	Vesicle-associated membrane protein-associated protein B	1	PLTSPLDDAEVK	PLTSPLDDAEVK	2	PLTSPLDDAEVK2	11312.9	5586.79	4382.53
Q9Z269	Q9Z269	VAPB_RAT	Vapb	Vesicle-associated membrane protein-associated protein B	1	PLTSPLDDAEVKK	PLTSPLDDAEVKK	3	PLTSPLDDAEVKK3	19650.9	12115.9	14174.2
Q9WV63	Q9WV63;A0A8I6A456	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	0	PLTTADPIDEHR	PLTTADPIDEHR	3	PLTTADPIDEHR3	59496.8	59799.6	45038.7
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	PLVAATNNFQK	PLVAATNNFQK	2	PLVAATNNFQK2	1937.33	4462.68	6091.57
Q9Z2F5	Q9Z2F5;Q9EQH5	CTBP1_RAT	Ctbp1	C-terminal-binding protein 1	0	PLVALLDGR	PLVALLDGR	2	PLVALLDGR2		50847	49790.6
D3ZII8	D3ZII8	D3ZII8_RAT	Smyd5	Histone-lysine N-trimethyltransferase SMYD5	1	PLVASQFLWNALYR	PLVASQFLWNALYR	2	PLVASQFLWNALYR2	5221.61	11975	5903.49
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	PLVETIFER	PLVETIFER	2	PLVETIFER2	604420	595264	538028
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	PLVLCGPPGSGK	PLVLC(UniMod:4)GPPGSGK	2	PLVLC(UniMod:4)GPPGSGK2	5422.07	807.647	3361.97
A0A0G2QC33	A0A0G2QC33	ATG4B_RAT	Atg4b	Cysteine protease ATG4B	1	PLVLLIPLR	PLVLLIPLR	2	PLVLLIPLR2	8041.3	8369.71	7915.76
D4A6D9	D4A6D9	D4A6D9_RAT	Hs1bp3	HCLS1 binding protein 3	1	PLVPSKPALPR	PLVPSKPALPR	3	PLVPSKPALPR3	11542.7	7644.26	8207.71
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	PLVSQYNV	PLVSQYNV	1	PLVSQYNV1	10362.3	6186.05	5972.44
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	PLVSQYNV	PLVSQYNV	2	PLVSQYNV2	23073.5	20180.9	12065.2
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	PLVTDPK	PLVTDPK	2	PLVTDPK2	112894	102144	95342.9
Q5PPL3	Q5PPL3	NSDHL_RAT	Nsdhl	Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating	1	PLVTMDDAVER	PLVTMDDAVER	2	PLVTMDDAVER2	7335.47	3507.82	7886.82
D3ZYT6	D3ZYT6	D3ZYT6_RAT	Treml1	Triggering receptor expressed on myeloid cells-like 1	1	PLVTSAVDR	PLVTSAVDR	2	PLVTSAVDR2	726756	498184	547569
Q5I0L7	Q5I0L7	KTI12_RAT	Kti12	Protein KTI12 homolog	1	PLVVVCGLPSSGK	PLVVVC(UniMod:4)GLPSSGK	2	PLVVVC(UniMod:4)GLPSSGK2	4123.09	4356.54	
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	PLVWTER	PLVWTER	2	PLVWTER2	9735.73	11693.8	10586.8
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	PLWHVFKPPPALECR	PLWHVFKPPPALEC(UniMod:4)R	4	PLWHVFKPPPALEC(UniMod:4)R4	19881.2	17788.1	24898.6
A0A8I6GBD2	A0A8I6GBD2	A0A8I6GBD2_RAT	Actr10	Actin related protein 10	1	PLYEGLGSGGEK	PLYEGLGSGGEK	2	PLYEGLGSGGEK2	93385.5	83980.6	86807
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	PLYHHFTTAINTENIR	PLYHHFTTAINTENIR	3	PLYHHFTTAINTENIR3	13261.5	4974.65	8319.45
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	PLYHHFTTAINTENIR	PLYHHFTTAINTENIR	4	PLYHHFTTAINTENIR4	10612.8	6915.63	8999.64
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	PLYILSSR	PLYILSSR	2	PLYILSSR2	40674.3	42758.6	40032.4
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	PLYPDDYMHISSK	PLYPDDYMHISSK	3	PLYPDDYMHISSK3	12263.6	10900.5	4645.28
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	PLYPDDYMHISSKPCDLHCTTVDGQR	PLYPDDYMHISSKPC(UniMod:4)DLHC(UniMod:4)TTVDGQR	4	PLYPDDYMHISSKPC(UniMod:4)DLHC(UniMod:4)TTVDGQR4	23977.8	19833.8	16291.3
P00507	P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	1	PLYSNPPLNGAR	PLYSNPPLNGAR	2	PLYSNPPLNGAR2	21870.7	16406.4	16186.4
Q9EPH8	D4A233;B5DF80;D3ZSR2;Q9EPH8;D3ZAS7;G3V9N0	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	0	PLYVALAQR	PLYVALAQR	2	PLYVALAQR2	11204.6	7332.88	9591.59
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	PMAALPPLPTGR	PMAALPPLPTGR	2	PMAALPPLPTGR2	101002	71542.2	84687.3
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	PMAFVTLTGLDVVYNAVHR	PMAFVTLTGLDVVYNAVHR	3	PMAFVTLTGLDVVYNAVHR3	5049.47	7127.92	6202.04
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	PMCRPIECPEPK	PMC(UniMod:4)RPIEC(UniMod:4)PEPK	3	PMC(UniMod:4)RPIEC(UniMod:4)PEPK3	15959.3		9265.46
P62630	P62630;F1M6C2;M0R757	EF1A1_RAT	Eef1a1	Elongation factor 1-alpha 1	0	PMCVESFSDYPPLGR	PMC(UniMod:4)VESFSDYPPLGR	3	PMC(UniMod:4)VESFSDYPPLGR3	8357.23	1132.63	2007.08
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	PMDLHVFHALR	PMDLHVFHALR	2	PMDLHVFHALR2		1084.98	2541.12
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	PMDLHVFHALR	PMDLHVFHALR	3	PMDLHVFHALR3	17546.1	22150.3	15354.8
P52632	P52632	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	1	PMDSQWIPHAQS	PMDSQWIPHAQS	2	PMDSQWIPHAQS2	23875.4	16277.9	18163.1
P30904	D3ZE63;P30904	MIF_RAT	Mif	Macrophage migration inhibitory factor	0	PMFIVNTNVPR	PMFIVNTNVPR	2	PMFIVNTNVPR2	77140.1	62409.2	56033
P35565	P35565	CALX_RAT	Canx	Calnexin	1	PMIDNPNYK	PMIDNPNYK	2	PMIDNPNYK2	744431	611026	689469
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	PMIHELLTEGR	PMIHELLTEGR	2	PMIHELLTEGR2	34363.8	20568.8	21415.4
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	PMIHELLTEGR	PMIHELLTEGR	3	PMIHELLTEGR3	412495	450434	456297
P04905	P04905	GSTM1_RAT	Gstm1	Glutathione S-transferase Mu 1	1	PMILGYWNVR	PMILGYWNVR	2	PMILGYWNVR2	38958	48407.2	40331.8
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	PMKPAASDLPVPAEGVR	PMKPAASDLPVPAEGVR	2	PMKPAASDLPVPAEGVR2	10466.2	5515.3	1194.15
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	PMKPAASDLPVPAEGVR	PMKPAASDLPVPAEGVR	3	PMKPAASDLPVPAEGVR3	760855	653722	625877
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	PMLQYVCDNSPEVR	PMLQYVC(UniMod:4)DNSPEVR	2	PMLQYVC(UniMod:4)DNSPEVR2		2611.53	
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	PMLQYVCDNSPEVR	PMLQYVC(UniMod:4)DNSPEVR	3	PMLQYVC(UniMod:4)DNSPEVR3	1784.85	6714.26	
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	PMMQHYISLLLK	PMMQHYISLLLK	3	PMMQHYISLLLK3	2130.63	1685.92	1109.66
Q01205	Q01205	ODO2_RAT	Dlst	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial	1	PMMYVALTYDHR	PMMYVALTYDHR	3	PMMYVALTYDHR3	3074.59		2003.7
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	PMPFHPPHYLPR	PMPFHPPHYLPR	3	PMPFHPPHYLPR3	6155.97		
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	PMPPRPPLPNQQFGVSLQHLR	PMPPRPPLPNQQFGVSLQHLR	4	PMPPRPPLPNQQFGVSLQHLR4	116544	94479.8	84886.5
Q63186	Q63186	EI2BD_RAT	Eif2b4	Translation initiation factor eIF-2B subunit delta	1	PMSASMCNAIK	PMSASMC(UniMod:4)NAIK	2	PMSASMC(UniMod:4)NAIK2	2659.69	4374.52	2092.6
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	PMSLASGSVPAAPHK	PMSLASGSVPAAPHK	3	PMSLASGSVPAAPHK3	20561.7	18475.9	12611.4
A0A8I5ZQ33;Q4VBH2	A0A8I5ZQ33;Q4VBH2	A0A8I5ZQ33_RAT;Q4VBH2_RAT	LOC100911093;Trnt1	CCA tRNA nucleotidyltransferase 1, mitochondrial-like	0	PMTVLASLFK	PMTVLASLFK	2	PMTVLASLFK2	2984.46	4567.69	4066.84
B1WC26	B1WC26	B1WC26_RAT	Nans	N-acetylneuraminate synthase	1	PMVISSGMQSMDTMK	PMVISSGMQSMDTMK	2	PMVISSGMQSMDTMK2	3753.44	4337.43	4726.37
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	PMWVVLLEDGIEFYK	PMWVVLLEDGIEFYK	3	PMWVVLLEDGIEFYK3		14289.5	13532.3
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	PMWVVLLEDGIEFYKK	PMWVVLLEDGIEFYKK	3	PMWVVLLEDGIEFYKK3	20472.5	24441.3	17531.4
P14046	Q6IE52;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	PMYKPGQSVK	PMYKPGQSVK	2	PMYKPGQSVK2	253022	185032	173117
Q32PX2	Q32PX2	AIMP2_RAT	Aimp2	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2	1	PMYQVKPYHGGSAPLR	PMYQVKPYHGGSAPLR	4	PMYQVKPYHGGSAPLR4	18894.9	18766.3	9804.05
Q5XIH7	Q5XIH7	PHB2_RAT	Phb2	Prohibitin-2	1	PNAQELPSMYQR	PNAQELPSMYQR	2	PNAQELPSMYQR2	13439	7416.58	8112.47
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	PNATVQWEEVCQPWVSGHR	PNATVQWEEVC(UniMod:4)QPWVSGHR	3	PNATVQWEEVC(UniMod:4)QPWVSGHR3	1320.02	1798.05	
P07151	P07151	B2MG_RAT	B2m	Beta-2-microglobulin	1	PNFLNCYVSQFHPPQIEIELLK	PNFLNC(UniMod:4)YVSQFHPPQIEIELLK	3	PNFLNC(UniMod:4)YVSQFHPPQIEIELLK3	4211.51		
D3ZN06	D3ZN06	D3ZN06_RAT	Cd248	CD248 molecule	1	PNFPQDGEPQR	PNFPQDGEPQR	2	PNFPQDGEPQR2	2609.28	2943.37	6323.19
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	PNFSHLTDPFDTPAFNK	PNFSHLTDPFDTPAFNK	3	PNFSHLTDPFDTPAFNK3	5327.64	4403.73	4541.61
A0A8I6AUZ6	A0A8I6AUZ6	A0A8I6AUZ6_RAT	Rarres2	Retinoic acid receptor responder protein 2	1	PNGVSEGALVDGTGCQGR	PNGVSEGALVDGTGC(UniMod:4)QGR	2	PNGVSEGALVDGTGC(UniMod:4)QGR2		4774.52	2162.88
Q8R500	Q8R500;Q8R4Z9	MFN2_RAT	Mfn2	Mitofusin-2	0	PNIFILNNR	PNIFILNNR	2	PNIFILNNR2	8927.71	4561.35	8978.51
P09330	P09330	PRPS2_RAT	Prps2	Ribose-phosphate pyrophosphokinase 2	1	PNIVLFSGSSHQDLSQR	PNIVLFSGSSHQDLSQR	3	PNIVLFSGSSHQDLSQR3	26459.8	14036.2	14203.2
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	PNKPGVYVR	PNKPGVYVR	2	PNKPGVYVR2	653410	709539	635827
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	PNLSGSSAGSHLSGLGGEGPGETEK	PNLSGSSAGSHLSGLGGEGPGETEK	3	PNLSGSSAGSHLSGLGGEGPGETEK3	5883.44	10718.6	8458.59
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	PNMCTCPSGQISPSCGSR	PNMC(UniMod:4)TC(UniMod:4)PSGQISPSC(UniMod:4)GSR	3	PNMC(UniMod:4)TC(UniMod:4)PSGQISPSC(UniMod:4)GSR3	5663.03	6188.81	5747.66
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	PNPCQNGGVCSR	PNPC(UniMod:4)QNGGVC(UniMod:4)SR	2	PNPC(UniMod:4)QNGGVC(UniMod:4)SR2	234520	134065	163373
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	PNPGSTSSPGSIPEEIR	PNPGSTSSPGSIPEEIR	2	PNPGSTSSPGSIPEEIR2	1.9118e+06	1.9366e+06	2.08178e+06
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	PNPGSTSSPGSIPEEIR	PNPGSTSSPGSIPEEIR	3	PNPGSTSSPGSIPEEIR3	398846	412324	517936
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	PNSNMVIVDVK	PNSNMVIVDVK	2	PNSNMVIVDVK2	12677.4		12287.2
Q3B8N7	Q3B8N7	T22D4_RAT	Tsc22d4	TSC22 domain family protein 4	1	PNSPALYFDASLVHK	PNSPALYFDASLVHK	3	PNSPALYFDASLVHK3	7529.94	3435.88	
P01026	P01026	CO3_RAT	C3	Complement C3	1	PNTSYIIGK	PNTSYIIGK	2	PNTSYIIGK2	4857.25	3829.18	
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	PNVVNWLCYR	PNVVNWLC(UniMod:4)YR	2	PNVVNWLC(UniMod:4)YR2	6301.21	11886.8	8985.92
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	PPAPDPFAR	PPAPDPFAR	2	PPAPDPFAR2	4806.8	8448.67	2860.11
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	PPDAGGCVHGDGDMGVLCPTGCELR	PPDAGGC(UniMod:4)VHGDGDMGVLC(UniMod:4)PTGC(UniMod:4)ELR	3	PPDAGGC(UniMod:4)VHGDGDMGVLC(UniMod:4)PTGC(UniMod:4)ELR3	1.0826e+06	1.32235e+06	1.36738e+06
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	PPDAGGCVHGDGDMGVLCPTGCELR	PPDAGGC(UniMod:4)VHGDGDMGVLC(UniMod:4)PTGC(UniMod:4)ELR	4	PPDAGGC(UniMod:4)VHGDGDMGVLC(UniMod:4)PTGC(UniMod:4)ELR4	154749	188365	231368
Q9QX75	Q9QX75	TRDN_RAT	Trdn	Triadin	1	PPEEKPK	PPEEKPK	2	PPEEKPK2	121307	150091	162858
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	PPLCFHNGVQYR	PPLC(UniMod:4)FHNGVQYR	2	PPLC(UniMod:4)FHNGVQYR2	13605	15608	14720
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	PPLCFHNGVQYR	PPLC(UniMod:4)FHNGVQYR	3	PPLC(UniMod:4)FHNGVQYR3	804652	864810	951547
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	PPLQEGALPQMLPGHSGPSGTNR	PPLQEGALPQMLPGHSGPSGTNR	3	PPLQEGALPQMLPGHSGPSGTNR3	4978.58	7963.25	8339.79
P35565	P35565	CALX_RAT	Canx	Calnexin	1	PPMIDNPNYQGIWKPR	PPMIDNPNYQGIWKPR	3	PPMIDNPNYQGIWKPR3	40871.4	54840.5	33991.1
Q5XIN7	Q5XIN7	PMGT1_RAT	Pomgnt1	Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1	1	PPSVTPIFLEPPPK	PPSVTPIFLEPPPK	2	PPSVTPIFLEPPPK2	247445	307017	360618
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	PPTDICSCDDNLGR	PPTDIC(UniMod:4)SC(UniMod:4)DDNLGR	2	PPTDIC(UniMod:4)SC(UniMod:4)DDNLGR2	4963.41	1569.77	1550.13
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	PPTDICSCDDNLGRPSVFIFPPKPK	PPTDIC(UniMod:4)SC(UniMod:4)DDNLGRPSVFIFPPKPK	4	PPTDIC(UniMod:4)SC(UniMod:4)DDNLGRPSVFIFPPKPK4	44992.6	53660.3	63980.4
P04906	P04906	GSTP1_RAT	Gstp1	Glutathione S-transferase P	1	PPYTIVYFPVR	PPYTIVYFPVR	2	PPYTIVYFPVR2	55149.2	59521.3	47122.3
P04906	P04906	GSTP1_RAT	Gstp1	Glutathione S-transferase P	1	PPYTIVYFPVR	PPYTIVYFPVR	3	PPYTIVYFPVR3	7213.76	4129.35	4634.32
P62870	P62870;F1LZ51;A0A8I5ZTT3	ELOB_RAT	Elob	Elongin-B	0	PQAPATVGLAFR	PQAPATVGLAFR	2	PQAPATVGLAFR2	131400	109865	99670.2
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PQAPITGYR	PQAPITGYR	2	PQAPITGYR2	1.13457e+07	1.14089e+07	1.02086e+07
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	PQATAVYK	PQATAVYK	2	PQATAVYK2	9103.96	5837.76	4024.88
D4A415	D4A415	D4A415_RAT	Abraxas2	Abraxas 2, BRISC complex subunit	1	PQAVGSSNYASTSAGLK	PQAVGSSNYASTSAGLK	2	PQAVGSSNYASTSAGLK2	34636.4	38582.4	32401.7
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	PQDALEGVILSPSLEAR	PQDALEGVILSPSLEAR	3	PQDALEGVILSPSLEAR3	2307.2		
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	PQDGVAVLVR	PQDGVAVLVR	2	PQDGVAVLVR2	15970.6	11362.5	9986.68
Q9EPF2	Q9EPF2	MUC18_RAT	Mcam	Cell surface glycoprotein MUC18	1	PQDHYVQLQVYK	PQDHYVQLQVYK	3	PQDHYVQLQVYK3	20213.4	18405.7	20917.8
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	PQELSSGDLK	PQELSSGDLK	2	PQELSSGDLK2	8834.11	5486.26	5791.78
O35964	O35964	SH3G1_RAT	Sh3gl1	Endophilin-A2	1	PQEPFELGELEQPNGGFPCASAPK	PQEPFELGELEQPNGGFPC(UniMod:4)ASAPK	3	PQEPFELGELEQPNGGFPC(UniMod:4)ASAPK3	12620.2	14129.5	10540.6
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	PQFLTCGHDK	PQFLTC(UniMod:4)GHDK	3	PQFLTC(UniMod:4)GHDK3	8940.63	13448.6	18849
P60123	A0A0G2K0H9;P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	0	PQGGQDILSMMGQLMKPK	PQGGQDILSMMGQLMKPK	3	PQGGQDILSMMGQLMKPK3		14198.9	8741.65
Q4QQV2	Q4QQV2	DOK1_RAT	Dok1	Docking protein 1	1	PQGLILPESGTTAGSGSK	PQGLILPESGTTAGSGSK	2	PQGLILPESGTTAGSGSK2	3075.61	3483.8	3771.92
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	PQKPWDK	PQKPWDK	2	PQKPWDK2	28349.8	12203.6	8348.28
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	PQKPWDKDAWEIPR	PQKPWDKDAWEIPR	3	PQKPWDKDAWEIPR3	103435	85658.9	86806.7
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	PQKPWDKDAWEIPR	PQKPWDKDAWEIPR	4	PQKPWDKDAWEIPR4	187683	186830	176645
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	PQLSPDPCSPLAR	PQLSPDPC(UniMod:4)SPLAR	2	PQLSPDPC(UniMod:4)SPLAR2	6908.13	3463.49	7091.72
Q5XIN6	Q5PQQ5;Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	0	PQLVALCK	PQLVALC(UniMod:4)K	2	PQLVALC(UniMod:4)K2		1338.1	
P48199	P48199	CRP_RAT	Crp	C-reactive protein	1	PQLWPLTDCCES	PQLWPLTDC(UniMod:4)C(UniMod:4)ES	2	PQLWPLTDC(UniMod:4)C(UniMod:4)ES2	1.00094e+07	9.3224e+06	9.8945e+06
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	PQLYPIPPHTQVR	PQLYPIPPHTQVR	3	PQLYPIPPHTQVR3	17825.4	21641.2	11635.5
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	PQPAPDPLLLQR	PQPAPDPLLLQR	2	PQPAPDPLLLQR2	1.06392e+06	906597	818020
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	PQPAPDPLLLQR	PQPAPDPLLLQR	3	PQPAPDPLLLQR3	35016.7	31727.5	34608.7
Q5BJQ2	Q5BJQ2	MINY1_RAT	Mindy1	Ubiquitin carboxyl-terminal hydrolase MINDY-1	1	PQQLPQSPR	PQQLPQSPR	2	PQQLPQSPR2	12221.9	11001.2	5632.77
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	PQRPTNLR	PQRPTNLR	2	PQRPTNLR2	12356.3		
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	PQSFCHSSSISPQDK	PQSFC(UniMod:4)HSSSISPQDK	3	PQSFC(UniMod:4)HSSSISPQDK3	6112.05	9397.83	4601.51
A0A0G2K3L8	A0A0G2K3L8	A0A0G2K3L8_RAT	Wdfy1	WD repeat and FYVE domain containing 1	1	PQSSRPVLLSK	PQSSRPVLLSK	3	PQSSRPVLLSK3	16230.2	11447.2	4164.87
Q9WUD9	Q9WUD9;F1LM93	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	0	PQTQGLAK	PQTQGLAK	2	PQTQGLAK2	9998.06	12875.1	13193.7
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	PQTSPSPK	PQTSPSPK	2	PQTSPSPK2			26636.7
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	PQTSPSPKPATK	PQTSPSPKPATK	2	PQTSPSPKPATK2			7325.25
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	PQTSPSPKPATK	PQTSPSPKPATK	3	PQTSPSPKPATK3			40401.7
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	PQTTISPADLHGMWYPTVR	PQTTISPADLHGMWYPTVR	3	PQTTISPADLHGMWYPTVR3		2180.61	5173
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	PQVPGEANPITMVAK	PQVPGEANPITMVAK	2	PQVPGEANPITMVAK2	38818.1	32277.2	38385.6
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	PQVQLHAQPQAK	PQVQLHAQPQAK	2	PQVQLHAQPQAK2	10299	12066.5	7808.47
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	PQVQLHAQPQAK	PQVQLHAQPQAK	3	PQVQLHAQPQAK3	236077	208822	211468
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	PQVQLHAQPQAKPHVQPQSVSSANTQPR	PQVQLHAQPQAKPHVQPQSVSSANTQPR	4	PQVQLHAQPQAKPHVQPQSVSSANTQPR4	33562.4	22974.1	20735.2
A0A0G2JVP5	A0A0G2JVP5	A0A0G2JVP5_RAT	Paip1	Poly(A) binding protein interacting protein 1	1	PQVVVAPVLMSK	PQVVVAPVLMSK	2	PQVVVAPVLMSK2	2896.02	4826.08	
O88808	O88808	TUB_RAT	Tub	Tubby protein homolog	1	PRNEHETLLAR	PRNEHETLLAR	3	PRNEHETLLAR3	1743.46		
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	PRPARPNLSGSSAGSHLSGLGGEGPGETEK	PRPARPNLSGSSAGSHLSGLGGEGPGETEK	4	PRPARPNLSGSSAGSHLSGLGGEGPGETEK4		3804.02	
A0A0G2JVL6	A0A0G2JVL6	A0A0G2JVL6_RAT	Ndufa8	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8	1	PRPEPSPVIEGDLKPAK	PRPEPSPVIEGDLKPAK	3	PRPEPSPVIEGDLKPAK3	31343.2	25906.4	26942
A0A0G2JVL6	A0A0G2JVL6	A0A0G2JVL6_RAT	Ndufa8	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8	1	PRPEPSPVIEGDLKPAK	PRPEPSPVIEGDLKPAK	4	PRPEPSPVIEGDLKPAK4	43246.1	44011.4	43198.1
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PRPGVTEATITGLEPGTEYTIYVIALK	PRPGVTEATITGLEPGTEYTIYVIALK	3	PRPGVTEATITGLEPGTEYTIYVIALK3	273078	3.24196e+07	2.36471e+07
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PRPGVTEATITGLEPGTEYTIYVIALK	PRPGVTEATITGLEPGTEYTIYVIALK	4	PRPGVTEATITGLEPGTEYTIYVIALK4	2.25967e+06	2.22062e+06	1.79943e+06
Q63787	Q63787	P85A_RAT	Pik3r1	Phosphatidylinositol 3-kinase regulatory subunit alpha	1	PRPPRPLPVAPGSSK	PRPPRPLPVAPGSSK	4	PRPPRPLPVAPGSSK4	33414.7	24850.5	37859.6
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	PRPPTDICSCDDNLGR	PRPPTDIC(UniMod:4)SC(UniMod:4)DDNLGR	2	PRPPTDIC(UniMod:4)SC(UniMod:4)DDNLGR2	94453.3	54079.8	75645.7
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	PRPPTDICSCDDNLGR	PRPPTDIC(UniMod:4)SC(UniMod:4)DDNLGR	3	PRPPTDIC(UniMod:4)SC(UniMod:4)DDNLGR3	212034	181191	167362
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	PRPPTDICSCDDNLGR	PRPPTDIC(UniMod:4)SC(UniMod:4)DDNLGR	4	PRPPTDIC(UniMod:4)SC(UniMod:4)DDNLGR4	26455.7	21284.1	21753.5
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	PRPPTDICSCDDNLGRPSVFIFPPK	PRPPTDIC(UniMod:4)SC(UniMod:4)DDNLGRPSVFIFPPK	4	PRPPTDIC(UniMod:4)SC(UniMod:4)DDNLGRPSVFIFPPK4	171804	168256	155824
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	PRPPTLLSQDQIK	PRPPTLLSQDQIK	3	PRPPTLLSQDQIK3	301999	269859	264998
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	PRPTDATVSLSSLVDYPHQAR	PRPTDATVSLSSLVDYPHQAR	4	PRPTDATVSLSSLVDYPHQAR4	52028.4	60387.3	48207.6
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PRPYLPNVDEEVQIGHVPR	PRPYLPNVDEEVQIGHVPR	3	PRPYLPNVDEEVQIGHVPR3	16356.1	26645.7	6559.83
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PRPYLPNVDEEVQIGHVPR	PRPYLPNVDEEVQIGHVPR	4	PRPYLPNVDEEVQIGHVPR4	70042.2	67085.6	63387.1
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	PRPYTFQVSSGSR	PRPYTFQVSSGSR	3	PRPYTFQVSSGSR3	8196.11	6824.79	4672.4
D3ZGE9	D3ZGE9	D3ZGE9_RAT	Rbm38	RNA binding motif protein 38	1	PSAAPSAMHGSQK	PSAAPSAMHGSQK	2	PSAAPSAMHGSQK2	2817.28		3491.02
O08679	O08679	MARK2_RAT	Mark2	Serine/threonine-protein kinase MARK2	1	PSADLTNSSAPSPSHK	PSADLTNSSAPSPSHK	3	PSADLTNSSAPSPSHK3	18043.9	17218.3	16052.7
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	PSALAIFTCRPNSHPFQER	PSALAIFTC(UniMod:4)RPNSHPFQER	4	PSALAIFTC(UniMod:4)RPNSHPFQER4	13022.7	5921.26	12135.1
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	PSALNSEEEAHEQSTEQDK	PSALNSEEEAHEQSTEQDK	3	PSALNSEEEAHEQSTEQDK3	12245.2	15766.3	21975
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	PSALSQGHGQDLLGR	PSALSQGHGQDLLGR	3	PSALSQGHGQDLLGR3	59774.1	82700.1	88215
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	PSAPSAGGIPVPR	PSAPSAGGIPVPR	2	PSAPSAGGIPVPR2	65781.7	48247.3	54142.3
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	PSAQPHPSGGLIIDK	PSAQPHPSGGLIIDK	3	PSAQPHPSGGLIIDK3	10926.6	12232.9	10723.9
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	PSAQPHPSGGLIIDKESEVYK	PSAQPHPSGGLIIDKESEVYK	3	PSAQPHPSGGLIIDKESEVYK3	11310.7	4427.55	3236.7
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	PSAQPHPSGGLIIDKESEVYK	PSAQPHPSGGLIIDKESEVYK	4	PSAQPHPSGGLIIDKESEVYK4	44198.6	21563.4	31103.4
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	PSATSATQELDR	PSATSATQELDR	2	PSATSATQELDR2	2575.81	3570.4	3455.75
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	PSAYNFDNSPVLQEWVTATDIR	PSAYNFDNSPVLQEWVTATDIR	3	PSAYNFDNSPVLQEWVTATDIR3	23603.2	18788.7	11775
D3ZDR7	D3ZDR7	D3ZDR7_RAT	Themis2	Thymocyte selection associated family member 2	1	PSCPQLER	PSC(UniMod:4)PQLER	2	PSC(UniMod:4)PQLER2	7193.51	12172.6	9831.55
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	PSDLRPGDVSGK	PSDLRPGDVSGK	2	PSDLRPGDVSGK2	14729.6	7303.3	10055.6
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	PSDLRPGDVSGK	PSDLRPGDVSGK	3	PSDLRPGDVSGK3	1.39856e+06	1.15349e+06	1.07583e+06
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	PSDLRPGDVSGKR	PSDLRPGDVSGKR	3	PSDLRPGDVSGKR3	31552.3	21621.4	28442.1
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	PSDTASEATRPATLNR	PSDTASEATRPATLNR	3	PSDTASEATRPATLNR3	66832.3	68077.2	74730.5
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	PSDTSPPFK	PSDTSPPFK	2	PSDTSPPFK2	38816.3	19980	19660.1
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	PSDVVNPLDLR	PSDVVNPLDLR	2	PSDVVNPLDLR2	18285.6	12097.3	16341.4
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	PSEAALMMLSFIK	PSEAALMMLSFIK	2	PSEAALMMLSFIK2	3763.36		1376.74
Q66HG5	Q66HG5	TM9S2_RAT	Tm9sf2	Transmembrane 9 superfamily member 2	1	PSENLGQVLFGER	PSENLGQVLFGER	2	PSENLGQVLFGER2	19550.9		19320.1
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	PSETGIIGIIDPECR	PSETGIIGIIDPEC(UniMod:4)R	2	PSETGIIGIIDPEC(UniMod:4)R2	4628.72		
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	PSETVGDLR	PSETVGDLR	2	PSETVGDLR2	11129	10674	8295.9
A0A0G2K7U7	A0A0G2K7U7	A0A0G2K7U7_RAT	Ankrd27	Ankyrin repeat domain 27	1	PSEVPAPSPTR	PSEVPAPSPTR	2	PSEVPAPSPTR2	11908.5	6282.62	7996.27
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	PSEYTLTAK	PSEYTLTAK	2	PSEYTLTAK2	20536.3	10480.3	19134
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	PSFMDYFDK	PSFMDYFDK	2	PSFMDYFDK2	22552.3	15251.1	15586.9
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	PSFVSDQRPQTVQGDHGDEIFSVFGTPFLK	PSFVSDQRPQTVQGDHGDEIFSVFGTPFLK	4	PSFVSDQRPQTVQGDHGDEIFSVFGTPFLK4	33579.8	10256.6	11816.5
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	PSFVSYVRPEEIHTNEK	PSFVSYVRPEEIHTNEK	3	PSFVSYVRPEEIHTNEK3	3214.91		3997.71
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	PSFVSYVRPEEIHTNEK	PSFVSYVRPEEIHTNEK	4	PSFVSYVRPEEIHTNEK4	17995.8	7185.46	13023
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	PSFVTFR	PSFVTFR	2	PSFVTFR2	17921.1	14455.9	23067.8
A0A8I5Y8A9	A0A8I5Y8A9	A0A8I5Y8A9_RAT	Gltpd2	Glycolipid transfer protein domain containing 2	1	PSGSQTLLLLHR	PSGSQTLLLLHR	3	PSGSQTLLLLHR3	40960	23157.2	26982.9
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	PSGYNPPISILGILEAEK	PSGYNPPISILGILEAEK	2	PSGYNPPISILGILEAEK2	25176.5	25537.2	29464.8
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	PSGYNPPISILGILEAEK	PSGYNPPISILGILEAEK	3	PSGYNPPISILGILEAEK3	14754	14080.6	17115.9
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	PSGYNPPISILGILEAEKER	PSGYNPPISILGILEAEKER	3	PSGYNPPISILGILEAEKER3	226912	189694	174186
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	PSHCTIYVAK	PSHC(UniMod:4)TIYVAK	3	PSHC(UniMod:4)TIYVAK3	6992.25	4455.6	7832.21
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	PSIGSASSSVVASASGSK	PSIGSASSSVVASASGSK	2	PSIGSASSSVVASASGSK2	7809.57	8802.01	9450.07
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	PSIGSASSSVVASASGSK	PSIGSASSSVVASASGSK	3	PSIGSASSSVVASASGSK3	7027.65	12148.4	10606.4
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	PSIPEEHR	PSIPEEHR	2	PSIPEEHR2	7566.21	11998.2	
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	PSLDQQRSCPTCTDSLLNGDFTIVYDVNR	PSLDQQRSC(UniMod:4)PTC(UniMod:4)TDSLLNGDFTIVYDVNR	4	PSLDQQRSC(UniMod:4)PTC(UniMod:4)TDSLLNGDFTIVYDVNR4	49342	40969.2	44743.7
Q62656	Q62656	PTPRZ_RAT	Ptprz1	Receptor-type tyrosine-protein phosphatase zeta	1	PSLENTFIHNTGK	PSLENTFIHNTGK	3	PSLENTFIHNTGK3	5635.57	8092.46	7482.18
M0R8A3	M0R8A3	M0R8A3_RAT	Gp6	Glycoprotein 6 (platelet)	1	PSLQAQPSSLVPLGHPVTLR	PSLQAQPSSLVPLGHPVTLR	3	PSLQAQPSSLVPLGHPVTLR3	201270	149058	169549
M0R8A3	M0R8A3	M0R8A3_RAT	Gp6	Glycoprotein 6 (platelet)	1	PSLQAQPSSLVPLGHPVTLR	PSLQAQPSSLVPLGHPVTLR	4	PSLQAQPSSLVPLGHPVTLR4	6698.89	4223.94	2683.35
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	PSLQIQK	PSLQIQK	2	PSLQIQK2	127570	119900	96912.2
M0R8A3	M0R8A3	M0R8A3_RAT	Gp6	Glycoprotein 6 (platelet)	1	PSLSAHPSSAIPPGR	PSLSAHPSSAIPPGR	3	PSLSAHPSSAIPPGR3	77026.7	59885.3	74085.1
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	PSLSPGKPQSSLVIPTSLFCK	PSLSPGKPQSSLVIPTSLFC(UniMod:4)K	3	PSLSPGKPQSSLVIPTSLFC(UniMod:4)K3	1207.39	4457.2	2872.94
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	PSLSTEDAQEEESIPK	PSLSTEDAQEEESIPK	2	PSLSTEDAQEEESIPK2	9512.06	11917	14452.2
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	PSLSTEDAQEEESIPK	PSLSTEDAQEEESIPK	3	PSLSTEDAQEEESIPK3	3071.27	4764.89	1406.92
Q9ES71	Q9ES71	GNPAT_RAT	Gnpat	Dihydroxyacetone phosphate acyltransferase	1	PSLVAVALHMTPGLR	PSLVAVALHMTPGLR	3	PSLVAVALHMTPGLR3	5178.71	1954.54	4858.8
P53987	P53987	MOT1_RAT	Slc16a1	Monocarboxylate transporter 1	1	PSMGLAANTR	PSMGLAANTR	2	PSMGLAANTR2	15031.9	16705.9	15046.7
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	PSMGLSQQIHSQVAPLSSQNVMIR	PSMGLSQQIHSQVAPLSSQNVMIR	3	PSMGLSQQIHSQVAPLSSQNVMIR3	69872.6	76344.3	67089.5
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	PSMGLSQQIHSQVAPLSSQNVMIR	PSMGLSQQIHSQVAPLSSQNVMIR	4	PSMGLSQQIHSQVAPLSSQNVMIR4	5566.31	3086.04	8586.42
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	PSMIDELYLPK	PSMIDELYLPK	2	PSMIDELYLPK2	13273	15931.1	5673.5
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	PSNLPTFSR	PSNLPTFSR	2	PSNLPTFSR2	1.15563e+06	1.08541e+06	1.03926e+06
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	PSNPDWGEFSEFGGSSSPATR	PSNPDWGEFSEFGGSSSPATR	3	PSNPDWGEFSEFGGSSSPATR3	103260	94278.3	96016.3
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	PSNPDWGEFSEFGGSSSPATRK	PSNPDWGEFSEFGGSSSPATRK	3	PSNPDWGEFSEFGGSSSPATRK3	5027.3		
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	PSNPSPMPSSTPSPSLNLGSTEEAIR	PSNPSPMPSSTPSPSLNLGSTEEAIR	3	PSNPSPMPSSTPSPSLNLGSTEEAIR3	8524.25	11129.3	11927.7
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	PSNVIPMK	PSNVIPMK	2	PSNVIPMK2	6284.57	4748.23	6748.9
A0A0G2QC40	A0A0G2QC40	A0A0G2QC40_RAT	Mkrn1	RING-type E3 ubiquitin transferase	1	PSPAASSSLPSGVGSLAEMNPGEAESR	PSPAASSSLPSGVGSLAEMNPGEAESR	3	PSPAASSSLPSGVGSLAEMNPGEAESR3	2442.91	5449.39	3458.95
Q1EHB3	Q1EHB3	ATS7_RAT	Adamts7	A disintegrin and metalloproteinase with thrombospondin motifs 7	1	PSPASSPK	PSPASSPK	1	PSPASSPK1	28461.4		12189.8
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	PSPCVPKPVDYSCQPWYAGPMER	PSPC(UniMod:4)VPKPVDYSC(UniMod:4)QPWYAGPMER	3	PSPC(UniMod:4)VPKPVDYSC(UniMod:4)QPWYAGPMER3	5401.46	6071.52	7241.85
A0A8I6A1Z5	A0A8I6A1Z5	A0A8I6A1Z5_RAT	Tmx1	Thioredoxin-related transmembrane protein 1	1	PSPEFSQPLK	PSPEFSQPLK	2	PSPEFSQPLK2	13782.9	16178.2	12784
A0A8I6A1Z5	A0A8I6A1Z5	A0A8I6A1Z5_RAT	Tmx1	Thioredoxin-related transmembrane protein 1	1	PSPEFSQPLKK	PSPEFSQPLKK	3	PSPEFSQPLKK3	12344.1	6918.95	9262.91
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	PSPEILMSLEELEK	PSPEILMSLEELEK	2	PSPEILMSLEELEK2	6357.08	8049.86	3901.97
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	PSPEILMSLEELEK	PSPEILMSLEELEK	3	PSPEILMSLEELEK3			2654.14
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	PSPGLQLYVDCK	PSPGLQLYVDC(UniMod:4)K	2	PSPGLQLYVDC(UniMod:4)K2	9624.89	12740	
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	PSPHLSAETPIPALPEFPR	PSPHLSAETPIPALPEFPR	3	PSPHLSAETPIPALPEFPR3	14951.9	7560.18	6264.84
Q5XII9	Q5XII9	MFR1L_RAT	Mtfr1l	Mitochondrial fission regulator 1-like	1	PSPLIVMQR	PSPLIVMQR	2	PSPLIVMQR2	10360.1	18557.9	10277.4
D3ZYS7	D3ZYS7;F1M2M6;F7F5P9	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	0	PSPLLVGR	PSPLLVGR	2	PSPLLVGR2	31016	24474.6	26521.7
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	PSPLTLAPHDFANIK	PSPLTLAPHDFANIK	3	PSPLTLAPHDFANIK3	12985.8	10211.7	17859.4
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	PSPMPVSPECLETLQGDER	PSPMPVSPEC(UniMod:4)LETLQGDER	3	PSPMPVSPEC(UniMod:4)LETLQGDER3	59023.7	63844.2	46166.4
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	PSPPIIQENAVSGYSLFTCR	PSPPIIQENAVSGYSLFTC(UniMod:4)R	3	PSPPIIQENAVSGYSLFTC(UniMod:4)R3	14435.5		7752.8
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	PSQELLWDLQQER	PSQELLWDLQQER	2	PSQELLWDLQQER2	2002.89		5383.86
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	PSQFYGELCDFSDK	PSQFYGELC(UniMod:4)DFSDK	2	PSQFYGELC(UniMod:4)DFSDK2	6632.81		3244.34
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	PSQFYGELCDFSDKEVEDCVTNR	PSQFYGELC(UniMod:4)DFSDKEVEDC(UniMod:4)VTNR	3	PSQFYGELC(UniMod:4)DFSDKEVEDC(UniMod:4)VTNR3	20834.4	14067.4	12764.6
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PSQGGEAPR	PSQGGEAPR	2	PSQGGEAPR2			11153.3
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	PSQHAGFVEICVAVCRPEFMAR	PSQHAGFVEIC(UniMod:4)VAVC(UniMod:4)RPEFMAR	4	PSQHAGFVEIC(UniMod:4)VAVC(UniMod:4)RPEFMAR4	2971.87	2444.48	2180.54
A0A8I6A456	A0A8I6A456	A0A8I6A456_RAT	ENSRNOG00000064986	Kinesin motor domain-containing protein	1	PSQLPEQSSSAQQNAR	PSQLPEQSSSAQQNAR	2	PSQLPEQSSSAQQNAR2	5988.1	3419.89	1913.67
A0A8I6A456	A0A8I6A456	A0A8I6A456_RAT	ENSRNOG00000064986	Kinesin motor domain-containing protein	1	PSQLPEQSSSAQQNAR	PSQLPEQSSSAQQNAR	3	PSQLPEQSSSAQQNAR3	3733.91	2199.36	1298
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PSQMQVTDVQDNSISVR	PSQMQVTDVQDNSISVR	2	PSQMQVTDVQDNSISVR2	2436.17	5666.68	2101.07
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PSQMQVTDVQDNSISVR	PSQMQVTDVQDNSISVR	3	PSQMQVTDVQDNSISVR3	23308.9	22895.3	19738.9
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	PSQVLDSPFPTGSGFGFSLR	PSQVLDSPFPTGSGFGFSLR	3	PSQVLDSPFPTGSGFGFSLR3	1.02239e+06	1.03035e+06	1.21552e+06
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	PSQVLDSPFPTGSGFGFSLR	PSQVLDSPFPTGSGFGFSLR	4	PSQVLDSPFPTGSGFGFSLR4		10613.8	7483.25
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	PSQVVAETR	PSQVVAETR	2	PSQVVAETR2	7140.75	15820.6	1554.57
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	PSQVYFGGTVVGEQAMK	PSQVYFGGTVVGEQAMK	2	PSQVYFGGTVVGEQAMK2	21413.7	11652.5	12859.9
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	PSRPPNVDLTR	PSRPPNVDLTR	3	PSRPPNVDLTR3	201947	208006	210799
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	PSSGSGNLK	PSSGSGNLK	2	PSSGSGNLK2			83148.2
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	PSSGSGNLKPSNPDWGEFSEFGGSSSPATR	PSSGSGNLKPSNPDWGEFSEFGGSSSPATR	4	PSSGSGNLKPSNPDWGEFSEFGGSSSPATR4	1.1939e+06	1.01178e+06	1.00973e+06
A0A8I5ZKS4	A0A8I5ZKS4	A0A8I5ZKS4_RAT	Hycc1	Family with sequence similarity 126, member A	1	PSSHGLAQTAATVFSK	PSSHGLAQTAATVFSK	3	PSSHGLAQTAATVFSK3	10081.3	4664.17	4259.23
Q8CHM7	Q8CHM7	HACL1_RAT	Hacl1	2-hydroxyacyl-CoA lyase 1	1	PSSIQHIPFVIEK	PSSIQHIPFVIEK	3	PSSIQHIPFVIEK3	33115.4	32572	36416.1
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	PSSLSSSQQSWSTR	PSSLSSSQQSWSTR	2	PSSLSSSQQSWSTR2	2169.52	1244.76	
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	PSSNISFPLVTVHLEK	PSSNISFPLVTVHLEK	3	PSSNISFPLVTVHLEK3	735.959	3132.78	
P01026	P01026	CO3_RAT	C3	Complement C3	1	PSSPEALVGK	PSSPEALVGK	2	PSSPEALVGK2	107937	75745.9	74512.7
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	PSSPNPGIEATLQER	PSSPNPGIEATLQER	2	PSSPNPGIEATLQER2	9243.3	14768.8	8186.44
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	PSSQPIMSQNLPK	PSSQPIMSQNLPK	2	PSSQPIMSQNLPK2	2196.96	2606.63	
Q9JI92	Q9JI92	SDCB1_RAT	Sdcbp	Syntenin-1	1	PSSVNYMVAPVTGNDAGIR	PSSVNYMVAPVTGNDAGIR	2	PSSVNYMVAPVTGNDAGIR2	56202.3	56292	53199.6
Q9JI92	Q9JI92	SDCB1_RAT	Sdcbp	Syntenin-1	1	PSSVNYMVAPVTGNDAGIR	PSSVNYMVAPVTGNDAGIR	3	PSSVNYMVAPVTGNDAGIR3	81822.7	87311.6	90445.1
Q9JI92	Q9JI92	SDCB1_RAT	Sdcbp	Syntenin-1	1	PSSVNYMVAPVTGNDAGIRR	PSSVNYMVAPVTGNDAGIRR	3	PSSVNYMVAPVTGNDAGIRR3	13824.6	13928.4	29140.1
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	PSTDTLTVTVENSHGLR	PSTDTLTVTVENSHGLR	2	PSTDTLTVTVENSHGLR2	9845.52	5005.16	3754.36
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	PSTDTLTVTVENSHGLR	PSTDTLTVTVENSHGLR	3	PSTDTLTVTVENSHGLR3	257099	247056	211323
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	PSTEQLLK	PSTEQLLK	2	PSTEQLLK2	2638.81		1274.28
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	PSTFAYPAPLEVPK	PSTFAYPAPLEVPK	2	PSTFAYPAPLEVPK2	25326.5	21741.5	18740.3
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	PSTFGGDVGFNIVNTASLK	PSTFGGDVGFNIVNTASLK	3	PSTFGGDVGFNIVNTASLK3	1101.06		
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	PSTFGGDVGFNIVNTASLKK	PSTFGGDVGFNIVNTASLKK	3	PSTFGGDVGFNIVNTASLKK3		2400.58	4421.97
Q3KRD8	A0A8I6AC66;Q3KRD8	IF6_RAT	Eif6	Eukaryotic translation initiation factor 6	0	PSTIATSMR	PSTIATSMR	2	PSTIATSMR2	10836	5150.45	
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	PSTKPAPVGTAPLPPWK	PSTKPAPVGTAPLPPWK	3	PSTKPAPVGTAPLPPWK3	117647	93120.7	52970.2
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	PSTMVVEHPEFLK	PSTMVVEHPEFLK	2	PSTMVVEHPEFLK2	9024.18	4025.98	7531.67
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	PSTMVVEHPEFLK	PSTMVVEHPEFLK	3	PSTMVVEHPEFLK3	120424	95463.5	87597.4
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	PSTPGLSVVSGISATSEDIPNK	PSTPGLSVVSGISATSEDIPNK	3	PSTPGLSVVSGISATSEDIPNK3	10500.8		5989.48
B5DEP5	B5DEP5	B5DEP5_RAT	Trip4	Thyroid hormone receptor interactor 4	1	PSTQEVSELQATYR	PSTQEVSELQATYR	2	PSTQEVSELQATYR2	2202.11		1407.4
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	PSTSGSFGYK	PSTSGSFGYK	2	PSTSGSFGYK2	10134.4	6126.5	4406.77
P11915	P11915	SCP2_RAT	Scp2	Sterol carrier protein 2	1	PSVALNSPR	PSVALNSPR	2	PSVALNSPR2	7001.01	10146.5	3369.81
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	PSVCGTAVCK	PSVC(UniMod:4)GTAVC(UniMod:4)K	2	PSVC(UniMod:4)GTAVC(UniMod:4)K2	43495.8	27805.9	42825.7
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	PSVEQLSNLIK	PSVEQLSNLIK	2	PSVEQLSNLIK2	8797.53	10144.5	11311.5
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	PSVFIFPPK	PSVFIFPPK	2	PSVFIFPPK2	13644	9986.9	
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	PSVFIFPPKPK	PSVFIFPPKPK	2	PSVFIFPPKPK2	177313	134032	140306
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	PSVFIFPPKPK	PSVFIFPPKPK	3	PSVFIFPPKPK3	801212	710521	790730
A0A8I5ZTB8	A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	PSVNAVANK	PSVNAVANK	2	PSVNAVANK2	17404.9	23527.1	16258.9
A0A8I6AVW0	A0A8I6AVW0	A0A8I6AVW0_RAT	ENSRNOG00000065875	Uncharacterized protein	1	PSVPEPEADGFVLLGDTANEVRCK	PSVPEPEADGFVLLGDTANEVRC(UniMod:4)K	3	PSVPEPEADGFVLLGDTANEVRC(UniMod:4)K3			4659.61
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	PSVSAPNPR	PSVSAPNPR	2	PSVSAPNPR2	74601.1	51314.3	50040.1
A0A8I5ZKS4	A0A8I5ZKS4	A0A8I5ZKS4_RAT	Hycc1	Family with sequence similarity 126, member A	1	PSVYHEPSSIGSMALTESALSQHGLSK	PSVYHEPSSIGSMALTESALSQHGLSK	4	PSVYHEPSSIGSMALTESALSQHGLSK4	4450.32	3892.33	5364.96
Q6AYK3	Q6AYK3	INO1_RAT	Isyna1	Inositol-3-phosphate synthase 1	1	PSVYIPEFIAANQTAR	PSVYIPEFIAANQTAR	2	PSVYIPEFIAANQTAR2	10461.6	12158	11871.6
Q6AYK3	Q6AYK3	INO1_RAT	Isyna1	Inositol-3-phosphate synthase 1	1	PSVYIPEFIAANQTAR	PSVYIPEFIAANQTAR	3	PSVYIPEFIAANQTAR3	1747.41		
Q5RK09	Q5RK09	EIF3G_RAT	Eif3g	Eukaryotic translation initiation factor 3 subunit G	1	PSWADQVEEEGEDDK	PSWADQVEEEGEDDK	2	PSWADQVEEEGEDDK2	7624.1	7975.96	10602.3
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	PSWEVSNGQK	PSWEVSNGQK	2	PSWEVSNGQK2	5133.21	4882.09	2944.13
P00507	A0A8I6GJD2;P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	0	PSWGNHTPIFR	PSWGNHTPIFR	2	PSWGNHTPIFR2	10156.3	5486.07	7714.45
P00507	A0A8I6GJD2;P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	0	PSWGNHTPIFR	PSWGNHTPIFR	3	PSWGNHTPIFR3	345019	328638	369647
Q0Z843	Q0Z843	Q0Z843_RAT	Fig4	FIG4 phosphoinositide 5-phosphatase	1	PTAAAPIISSVQK	PTAAAPIISSVQK	2	PTAAAPIISSVQK2	9061.51	10587.8	6980.97
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	PTAAELEEVLQVNSLIQTQK	PTAAELEEVLQVNSLIQTQK	3	PTAAELEEVLQVNSLIQTQK3	65045.2	37502	33016.9
Q01205	Q01205	ODO2_RAT	Dlst	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial	1	PTAAPPLAEAGAAK	PTAAPPLAEAGAAK	2	PTAAPPLAEAGAAK2	5762.42	1509.57	3912.27
A0A0G2K5L2	A0A0G2K5L2	GHC1_RAT	Slc25a22	Mitochondrial glutamate carrier 1	1	PTATQLTR	PTATQLTR	2	PTATQLTR2	2175.19		
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	PTDATVSLSSLVDYPHQAR	PTDATVSLSSLVDYPHQAR	3	PTDATVSLSSLVDYPHQAR3	148406	161834	153368
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	PTDGFLDTK	PTDGFLDTK	2	PTDGFLDTK2	1.90295e+06	2.5891e+06	2.24614e+06
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	PTDYHGLLLPHIEGPEIK	PTDYHGLLLPHIEGPEIK	4	PTDYHGLLLPHIEGPEIK4	3893.22	1998.85	3993.19
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	PTEGALIALAMK	PTEGALIALAMK	2	PTEGALIALAMK2	8670.84	10565	4651.63
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	PTEICADPQFIIGGATR	PTEIC(UniMod:4)ADPQFIIGGATR	2	PTEIC(UniMod:4)ADPQFIIGGATR2	7999.93	8250.23	6820.07
A0A0G2K6C7	A0A0G2K6C7	A0A0G2K6C7_RAT	Trim5	Tripartite motif-containing 5	1	PTENCHAGVLGYPAIQSGK	PTENC(UniMod:4)HAGVLGYPAIQSGK	3	PTENC(UniMod:4)HAGVLGYPAIQSGK3	11412.5	9645.28	20037.4
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	PTFCNVCR	PTFC(UniMod:4)NVC(UniMod:4)R	2	PTFC(UniMod:4)NVC(UniMod:4)R2	288953	265704	228663
P20786	P20786	PGFRA_RAT	Pdgfra	Platelet-derived growth factor receptor alpha	1	PTFGHLETVNLHQVR	PTFGHLETVNLHQVR	4	PTFGHLETVNLHQVR4	1598.65	5725.84	
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	PTFPGVIR	PTFPGVIR	2	PTFPGVIR2	32950.3	33571.9	11046
Q5RK09	Q5RK09	EIF3G_RAT	Eif3g	Eukaryotic translation initiation factor 3 subunit G	1	PTGDFDSKPSWADQVEEEGEDDK	PTGDFDSKPSWADQVEEEGEDDK	3	PTGDFDSKPSWADQVEEEGEDDK3	13212.7	6825.77	12318.3
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	PTGGIIDMASSTFQGIK	PTGGIIDMASSTFQGIK	2	PTGGIIDMASSTFQGIK2	27866.7	20056.6	30869.7
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	PTGGIIDMASSTFQGIK	PTGGIIDMASSTFQGIK	3	PTGGIIDMASSTFQGIK3	22524.1	29616.6	17037.6
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	PTGGIIDMASSTFQGIQR	PTGGIIDMASSTFQGIQR	2	PTGGIIDMASSTFQGIQR2	4908.71	7536.4	3167.09
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	PTGGIIDMASSTFQGIQR	PTGGIIDMASSTFQGIQR	3	PTGGIIDMASSTFQGIQR3	14259.6	21846.5	17659.8
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	PTHEWFLQR	PTHEWFLQR	3	PTHEWFLQR3	9107.74	11050.9	10615.9
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	PTHFTVNAK	PTHFTVNAK	2	PTHFTVNAK2	32457.4	17055.5	9973.54
A0A8I5ZZK5	A0A8I5ZZK5	A0A8I5ZZK5_RAT	Bank1	B-cell scaffold protein with ankyrin repeats 1	1	PTHIPLKEETTPYIAQVFQQK	PTHIPLKEETTPYIAQVFQQK	4	PTHIPLKEETTPYIAQVFQQK4	9711.08	3715.14	3308.12
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	PTICQLLIDR	PTIC(UniMod:4)QLLIDR	2	PTIC(UniMod:4)QLLIDR2	10105.3	4837.8	4228.36
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	PTKSEGYLYTPQASSAEVEMSAYVVLAR	PTKSEGYLYTPQASSAEVEMSAYVVLAR	4	PTKSEGYLYTPQASSAEVEMSAYVVLAR4	81499.4	61539	48502.1
Q6P7R8	Q6P7R8	DHB12_RAT	Hsd17b12	Very-long-chain 3-oxoacyl-CoA reductase	1	PTLDKPSAETFVK	PTLDKPSAETFVK	3	PTLDKPSAETFVK3		1706.4	
O88656	Q99PD4;O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	0	PTLVILR	PTLVILR	2	PTLVILR2	12848.6	13475.3	12065.3
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	PTMADELYDQDYPIHSVEDR	PTMADELYDQDYPIHSVEDR	3	PTMADELYDQDYPIHSVEDR3	10175.9	21460.8	12896.7
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	PTMQDDPR	PTMQDDPR	2	PTMQDDPR2		24752.4	
Q4V8B7	Q4V8B7	HSDL1_RAT	Hsdl1	Inactive hydroxysteroid dehydrogenase-like protein 1	1	PTPQLAAFSASK	PTPQLAAFSASK	2	PTPQLAAFSASK2	33729.9	58987.3	
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	PTPSSDMTVR	PTPSSDMTVR	2	PTPSSDMTVR2	26198.3	22055.6	24417.4
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	PTQFDLLTHMQK	PTQFDLLTHMQK	3	PTQFDLLTHMQK3	1897.33	2446.56	3071.83
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	PTSAPAIAQSQVMEGPGAPAK	PTSAPAIAQSQVMEGPGAPAK	4	PTSAPAIAQSQVMEGPGAPAK4	8967.83	4023.69	
Q499P3	Q499P3	C1GLC_RAT	C1galt1c1	C1GALT1-specific chaperone 1	1	PTTFAVIENLK	PTTFAVIENLK	2	PTTFAVIENLK2	14590.4	15648.8	10100
D3ZYR1	D3ZYR1	FCHO2_RAT	Fcho2	F-BAR domain only protein 2	1	PTTPLSLGTIVPPPRPASR	PTTPLSLGTIVPPPRPASR	3	PTTPLSLGTIVPPPRPASR3	4855.43		5431.8
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	PTTQQSPQDEQEK	PTTQQSPQDEQEK	2	PTTQQSPQDEQEK2			7485.29
F1M7Z1	F1M7Z1	F1M7Z1_RAT	Edc3	Enhancer of mRNA-decapping protein 3	1	PTVALLCGPHVK	PTVALLC(UniMod:4)GPHVK	3	PTVALLC(UniMod:4)GPHVK3	5488.22	4253.43	
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	PTVAQQR	PTVAQQR	2	PTVAQQR2			4.6548e+06
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	PTVCFLK	PTVC(UniMod:4)FLK	1	PTVC(UniMod:4)FLK1	6878.28	2083.34	3012.48
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	PTVCFLK	PTVC(UniMod:4)FLK	2	PTVC(UniMod:4)FLK2	953607	590876	537575
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	PTVNFPCGK	PTVNFPC(UniMod:4)GK	2	PTVNFPC(UniMod:4)GK2	1.02733e+06	693451	730649
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	PTVSQQQSCPTCSTSLLNGDFK	PTVSQQQSC(UniMod:4)PTC(UniMod:4)STSLLNGDFK	3	PTVSQQQSC(UniMod:4)PTC(UniMod:4)STSLLNGDFK3	2.42372e+06	2.67516e+06	2.33859e+06
A0A8I6G1P7	A0A8I6ABN8;D3ZQM9;A0A8I6G1P7	A0A8I6G1P7_RAT	ENSRNOG00000062657	Ig-like domain-containing protein	0	PTYADDFK	PTYADDFK	2	PTYADDFK2	35269.4	34100	38224.5
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	PTYATAMLQNLLK	PTYATAMLQNLLK	2	PTYATAMLQNLLK2	4622.96	5065.71	4824.67
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	PVAAEFYGSLEHPQTHYLAVAVVK	PVAAEFYGSLEHPQTHYLAVAVVK	4	PVAAEFYGSLEHPQTHYLAVAVVK4	6323.73	6652.7	4854.8
Q68FV6	Q68FV6	GLMP_RAT	Glmp	Glycosylated lysosomal membrane protein	1	PVAFSQEQR	PVAFSQEQR	2	PVAFSQEQR2	22311.7	14213.2	14028.2
P08649	P08649	CO4_RAT	C4	Complement C4	1	PVAFSVVPTAAASIPLK	PVAFSVVPTAAASIPLK	2	PVAFSVVPTAAASIPLK2	1.22096e+07	1.34039e+07	1.29409e+07
P08649	P08649	CO4_RAT	C4	Complement C4	1	PVAFSVVPTAAASIPLK	PVAFSVVPTAAASIPLK	3	PVAFSVVPTAAASIPLK3	108945	106863	1.35613e+07
P08649	P08649	CO4_RAT	C4	Complement C4	1	PVAFSVVPTAAASIPLK	PVAFSVVPTAAASIPLK	4	PVAFSVVPTAAASIPLK4	8696.86	12448	12653.4
P08649	P08649	CO4_RAT	C4	Complement C4	1	PVAFSVVPTAAASIPLKVVAR	PVAFSVVPTAAASIPLKVVAR	3	PVAFSVVPTAAASIPLKVVAR3	15129.2	20327.2	12552.3
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	PVAFSVVPTAAASMPLK	PVAFSVVPTAAASMPLK	2	PVAFSVVPTAAASMPLK2		13958.9	6.68062e+06
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	PVAFSVVPTAAASMPLK	PVAFSVVPTAAASMPLK	3	PVAFSVVPTAAASMPLK3	2915.96	3574.54	2.5588e+06
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	PVALECVAR	PVALEC(UniMod:4)VAR	2	PVALEC(UniMod:4)VAR2	10380	7686.01	8190.39
Q04589	Q04589;A0A8I6A1Z2	FGFR1_RAT	Fgfr1	Fibroblast growth factor receptor 1	0	PVAPYWTSPEK	PVAPYWTSPEK	2	PVAPYWTSPEK2	4626.61	3514.51	
P67779	P67779;A0A8I5ZUY9	PHB1_RAT	Phb1	Prohibitin 1	0	PVASQLPR	PVASQLPR	2	PVASQLPR2	57842.1	38822.7	38033.6
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	PVAVALDTK	PVAVALDTK	2	PVAVALDTK2	45169.4	21284.5	17782.1
Q6P4Z9	Q6P4Z9	CSN8_RAT	Cops8	COP9 signalosome complex subunit 8	1	PVAVMADNAFSFR	PVAVMADNAFSFR	2	PVAVMADNAFSFR2	70582.7	65979.9	58963.1
Q5RJQ0	Q5RJQ0	CHST1_RAT	Chst1	Carbohydrate sulfotransferase 1	1	PVCDPPGASDLILEEGDCVRK	PVC(UniMod:4)DPPGASDLILEEGDC(UniMod:4)VRK	3	PVC(UniMod:4)DPPGASDLILEEGDC(UniMod:4)VRK3	7094.9		4183.79
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	PVCGLSTHTSGGR	PVC(UniMod:4)GLSTHTSGGR	2	PVC(UniMod:4)GLSTHTSGGR2	2916.87		
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	PVCGLSTHTSGGR	PVC(UniMod:4)GLSTHTSGGR	3	PVC(UniMod:4)GLSTHTSGGR3	103810	66682.3	64931.6
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	PVCKPCYVK	PVC(UniMod:4)KPC(UniMod:4)YVK	2	PVC(UniMod:4)KPC(UniMod:4)YVK2	5236.41		5299.34
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	PVCLEPGLSYK	PVC(UniMod:4)LEPGLSYK	2	PVC(UniMod:4)LEPGLSYK2	30740.1		75186.8
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	PVDGLTTLR	PVDGLTTLR	2	PVDGLTTLR2	27245.8	26746.3	23588.1
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	PVDNFDLVLFGSQVQSWK	PVDNFDLVLFGSQVQSWK	3	PVDNFDLVLFGSQVQSWK3	238540	229240	228603
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	PVDPQIPQLVAVK	PVDPQIPQLVAVK	2	PVDPQIPQLVAVK2	5599.25		5216.58
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	PVDPQIPQLVAVK	PVDPQIPQLVAVK	3	PVDPQIPQLVAVK3	5947.63	5398.39	2940.63
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	PVDQYEDCYLAR	PVDQYEDC(UniMod:4)YLAR	2	PVDQYEDC(UniMod:4)YLAR2	13993.2	12927.8	22587.9
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	PVDYSCQPWYAGPMER	PVDYSC(UniMod:4)QPWYAGPMER	2	PVDYSC(UniMod:4)QPWYAGPMER2	4323.72	6532	4522.51
P08650	P08650	CO5_RAT	C5	Complement C5	1	PVEVPLNDDLIVTTGYSSGLATVYVK	PVEVPLNDDLIVTTGYSSGLATVYVK	3	PVEVPLNDDLIVTTGYSSGLATVYVK3	6843.33	7249.25	9549.18
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	PVFAHLDHHK	PVFAHLDHHK	3	PVFAHLDHHK3	8512.95	2687.55	
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	PVFSWSFPTR	PVFSWSFPTR	2	PVFSWSFPTR2	19290.7	19902.6	18363.9
P49432	P49432	ODPB_RAT	Pdhb	Pyruvate dehydrogenase E1 component subunit beta, mitochondrial	1	PVGHCLEAAAVLSK	PVGHC(UniMod:4)LEAAAVLSK	3	PVGHC(UniMod:4)LEAAAVLSK3	31492.1	28650.2	21967.2
Q6AY64	Q6AY64	CF120_RAT		UPF0669 protein C6orf120 homolog	1	PVGIGIYGHPSHHESDFEMR	PVGIGIYGHPSHHESDFEMR	4	PVGIGIYGHPSHHESDFEMR4	13512.6	13963.6	9349.98
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	PVGSETPEAK	PVGSETPEAK	2	PVGSETPEAK2	7315.77	3991.26	
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	PVHAVFVSEGK	PVHAVFVSEGK	2	PVHAVFVSEGK2	25523.5	19701.8	20237.1
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	PVHAVFVSEGK	PVHAVFVSEGK	3	PVHAVFVSEGK3	260343	206421	177640
P21531	P21531	RL3_RAT	Rpl3	Large ribosomal subunit protein uL3	1	PVHLTAFLGYK	PVHLTAFLGYK	3	PVHLTAFLGYK3	6976.91		
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	PVICATQMLESMIK	PVIC(UniMod:4)ATQMLESMIK	2	PVIC(UniMod:4)ATQMLESMIK2	16665.9	6458.05	3743.94
P20069	P20069	MPPA_RAT	Pmpca	Mitochondrial-processing peptidase subunit alpha	1	PVIFEDVGR	PVIFEDVGR	2	PVIFEDVGR2	8880.39		
Q62696	Q63622;Q62936;Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	0	PVIILGPMK	PVIILGPMK	2	PVIILGPMK2	3846.5	1870.84	
B2GV15	B2GV15	B2GV15_RAT	Dbt	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	PVILPPEVAIGALGAIK	PVILPPEVAIGALGAIK	2	PVILPPEVAIGALGAIK2	8389.6	5651.21	4807.03
B2GV15	B2GV15	B2GV15_RAT	Dbt	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	PVILPPEVAIGALGAIK	PVILPPEVAIGALGAIK	3	PVILPPEVAIGALGAIK3	6698.99	9523.39	10129.4
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	PVILRPPGNK	PVILRPPGNK	2	PVILRPPGNK2	7091.59	5298.66	6680.23
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	PVILVPGCMGNR	PVILVPGC(UniMod:4)MGNR	2	PVILVPGC(UniMod:4)MGNR2	250085	189226	198903
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	PVILVPGCMGNR	PVILVPGC(UniMod:4)MGNR	3	PVILVPGC(UniMod:4)MGNR3	5801.11	6595.65	7094.34
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	PVIVAYK	PVIVAYK	2	PVIVAYK2	10804.6	36393.2	3270.52
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	PVIVEPEGIEK	PVIVEPEGIEK	2	PVIVEPEGIEK2	67540.2	58257.4	55400.7
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	PVLEETPSK	PVLEETPSK	2	PVLEETPSK2	86257.6	79034.9	67562.8
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	PVLGFVR	PVLGFVR	2	PVLGFVR2	17828.3	16666.2	20011
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	PVLHMASPEQPPTDLNR	PVLHMASPEQPPTDLNR	3	PVLHMASPEQPPTDLNR3	403465	430522	330156
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	PVLPTSGWK	PVLPTSGWK	2	PVLPTSGWK2	13946.8	11681.9	
D3ZHR2	D3ZHR2	ABCD1_RAT	Abcd1	ATP-binding cassette sub-family D member 1	1	PVLSTPSRPSR	PVLSTPSRPSR	3	PVLSTPSRPSR3	29028.9	24033.5	30822.3
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	PVLTLDMPSSER	PVLTLDMPSSER	2	PVLTLDMPSSER2	5476.05		3728.29
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	PVLVLSQNTK	PVLVLSQNTK	2	PVLVLSQNTK2	39715.3	28136.5	27933.7
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	PVNAGVGR	PVNAGVGR	2	PVNAGVGR2		32194.8	
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	PVNAIIEHVR	PVNAIIEHVR	3	PVNAIIEHVR3	6800.29		
Q6RUV5	A0A8I6A1P8;M0R5T4;Q6RUV5	RAC1_RAT	Rac1	Ras-related C3 botulinum toxin substrate 1	0	PVNLGLWDTAGQEDYDR	PVNLGLWDTAGQEDYDR	2	PVNLGLWDTAGQEDYDR2	2805.61	2641.83	1931.46
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	PVNPVTQK	PVNPVTQK	2	PVNPVTQK2	1.05695e+06	602928	516636
P15384	P15384	KCNA3_RAT	Kcna3	Potassium voltage-gated channel subfamily A member 3	1	PVNVPIDIFSEEIR	PVNVPIDIFSEEIR	2	PVNVPIDIFSEEIR2	8325.65	12550.3	13670.1
P63142	P63142	KCNA2_RAT	Kcna2	Potassium voltage-gated channel subfamily A member 2	1	PVNVPLDIFSEEIR	PVNVPLDIFSEEIR	2	PVNVPLDIFSEEIR2	8325.65	12550.3	13670.1
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	PVPESQLLPGQR	PVPESQLLPGQR	2	PVPESQLLPGQR2	140876	98214.8	130391
P18292	P18292	THRB_RAT	F2	Prothrombin	1	PVPFSDYIHPVCLPDK	PVPFSDYIHPVC(UniMod:4)LPDK	2	PVPFSDYIHPVC(UniMod:4)LPDK2	319049	209472	259385
P18292	P18292	THRB_RAT	F2	Prothrombin	1	PVPFSDYIHPVCLPDK	PVPFSDYIHPVC(UniMod:4)LPDK	3	PVPFSDYIHPVC(UniMod:4)LPDK3	161034	134540	152073
P18292	P18292	THRB_RAT	F2	Prothrombin	1	PVPFSDYIHPVCLPDK	PVPFSDYIHPVC(UniMod:4)LPDK	4	PVPFSDYIHPVC(UniMod:4)LPDK4	11378.3	7526.69	7089.39
P18292	P18292	THRB_RAT	F2	Prothrombin	1	PVPFSDYIHPVCLPDKQTVTSLLQAGYK	PVPFSDYIHPVC(UniMod:4)LPDKQTVTSLLQAGYK	4	PVPFSDYIHPVC(UniMod:4)LPDKQTVTSLLQAGYK4	63385.7	63429.1	80400.9
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	PVPGHVK	PVPGHVK	1	PVPGHVK1			1.62188e+06
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	PVPGLVTMK	PVPGLVTMK	1	PVPGLVTMK1	16172	8752.9	4586.23
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	PVPGLVTMK	PVPGLVTMK	2	PVPGLVTMK2	6.99352e+06	5.20316e+06	4.61708e+06
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	PVPISYHQLEAFYSIFTTEQQDHVK	PVPISYHQLEAFYSIFTTEQQDHVK	4	PVPISYHQLEAFYSIFTTEQQDHVK4	8909.82	6570.6	4282.4
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	PVPLEVHIQGFPGQHYCPR	PVPLEVHIQGFPGQHYC(UniMod:4)PR	4	PVPLEVHIQGFPGQHYC(UniMod:4)PR4		4242.92	
Q6IN36	Q6IN36	WIPF1_RAT	Wipf1	WAS/WASL-interacting protein family member 1	1	PVPPPPAPPPPPTFALANTEKPSLNK	PVPPPPAPPPPPTFALANTEKPSLNK	3	PVPPPPAPPPPPTFALANTEKPSLNK3	22267.4	24603.4	16793.8
Q6IN36	Q6IN36	WIPF1_RAT	Wipf1	WAS/WASL-interacting protein family member 1	1	PVPPPPAPPPPPTFALANTEKPSLNK	PVPPPPAPPPPPTFALANTEKPSLNK	4	PVPPPPAPPPPPTFALANTEKPSLNK4	108251	101168	109142
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	PVPSEPDVPVAPLER	PVPSEPDVPVAPLER	2	PVPSEPDVPVAPLER2	101294	97356.4	103319
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	PVPSEPDVPVAPLER	PVPSEPDVPVAPLER	3	PVPSEPDVPVAPLER3	9789.75	10967.7	8028.04
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	PVQGVAYTR	PVQGVAYTR	2	PVQGVAYTR2	1.96569e+07	1.95399e+07	1.83804e+07
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	PVQLSDRETLLNSATTSLNSK	PVQLSDRETLLNSATTSLNSK	3	PVQLSDRETLLNSATTSLNSK3	20112.6	8663.37	22585.6
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	PVQMMSMK	PVQMMSMK	2	PVQMMSMK2	1239.28	5254.96	4018.23
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	PVQMMYLR	PVQMMYLR	2	PVQMMYLR2	6972.79	6453.45	7483.55
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	PVQPGETFTYK	PVQPGETFTYK	2	PVQPGETFTYK2	553068	517630	521734
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	PVRPPAPGHGFPLIK	PVRPPAPGHGFPLIK	4	PVRPPAPGHGFPLIK4	11010.5	10453.3	3710.42
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	PVSDQVQIK	PVSDQVQIK	2	PVSDQVQIK2	10609.1		5550.38
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	PVSETCTDR	PVSETC(UniMod:4)TDR	2	PVSETC(UniMod:4)TDR2			11134.4
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PVSINYQTEIDKPSQMQVTDVQDNSISVR	PVSINYQTEIDKPSQMQVTDVQDNSISVR	4	PVSINYQTEIDKPSQMQVTDVQDNSISVR4	480136	539777	423560
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	PVSPKPTSLTK	PVSPKPTSLTK	3	PVSPKPTSLTK3	11876.6	7635.53	8697.2
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	PVSPYMFISPPQAIK	PVSPYMFISPPQAIK	2	PVSPYMFISPPQAIK2	27862	27777.7	11791.7
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	PVSPYMFISPPQAIK	PVSPYMFISPPQAIK	3	PVSPYMFISPPQAIK3	38435.3	29898.9	33947.8
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	PVTEFATCHLAQAPNHVVVSR	PVTEFATC(UniMod:4)HLAQAPNHVVVSR	3	PVTEFATC(UniMod:4)HLAQAPNHVVVSR3	5170.35		
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	PVTEFATCHLAQAPNHVVVSR	PVTEFATC(UniMod:4)HLAQAPNHVVVSR	4	PVTEFATC(UniMod:4)HLAQAPNHVVVSR4	6810.32	8422.26	5706.27
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	PVTFTDYVVPLCLPER	PVTFTDYVVPLC(UniMod:4)LPER	2	PVTFTDYVVPLC(UniMod:4)LPER2	68876.7	39571.8	35608.8
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	PVTFTDYVVPLCLPER	PVTFTDYVVPLC(UniMod:4)LPER	3	PVTFTDYVVPLC(UniMod:4)LPER3	6629.96	15856.9	6294.36
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	PVTQGDVYR	PVTQGDVYR	2	PVTQGDVYR2	10787	7434.23	7582.61
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	PVTQTDVYR	PVTQTDVYR	2	PVTQTDVYR2	34175.3	31703.2	38375.8
D3ZK09	D3ZK09	D3ZK09_RAT	Scyl3	SCY1 like pseudokinase 3	1	PVTSGEQMPTAALLPLTEESKPVQSR	PVTSGEQMPTAALLPLTEESKPVQSR	3	PVTSGEQMPTAALLPLTEESKPVQSR3	10410.9	15041.4	13526.8
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	PVTSGLTR	PVTSGLTR	2	PVTSGLTR2	7354.6	7502.71	6343.13
D3ZYT6	D3ZYT6	D3ZYT6_RAT	Treml1	Triggering receptor expressed on myeloid cells-like 1	1	PVTYATVVFPGR	PVTYATVVFPGR	2	PVTYATVVFPGR2	628612	530150	575449
D3ZYT6	D3ZYT6	D3ZYT6_RAT	Treml1	Triggering receptor expressed on myeloid cells-like 1	1	PVTYATVVFPGR	PVTYATVVFPGR	3	PVTYATVVFPGR3	35270.2	29537.8	28844.6
A0A0G2K712	A0A0G2K712	A0A0G2K712_RAT	Tbc1d5	TBC1 domain family, member 5	1	PVTYQFHPNLDYYK	PVTYQFHPNLDYYK	3	PVTYQFHPNLDYYK3	6928.07	8813.53	10277.1
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	PVVAFQAGSFLASR	PVVAFQAGSFLASR	2	PVVAFQAGSFLASR2	3979.06		1020.63
D3ZSQ1	D3ZSQ1	D3ZSQ1_RAT	Pcnx3	Pecanex-like protein	1	PVVLQGMQVR	PVVLQGMQVR	2	PVVLQGMQVR2	6491.09	5051.79	5602.4
Q6IE64	Q6IE64	C1RL_RAT	C1rl	Complement C1r subcomponent-like protein	1	PVVPIAENPNTFGSSR	PVVPIAENPNTFGSSR	2	PVVPIAENPNTFGSSR2	12654.6	7991.37	7966.82
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	PVVSPSALGAHLSVPQGQAASK	PVVSPSALGAHLSVPQGQAASK	3	PVVSPSALGAHLSVPQGQAASK3	5054.37	7810.71	
Q63493	Q63493	CD1D_RAT	Cd1d	Antigen-presenting glycoprotein CD1d	1	PVWVMWMR	PVWVMWMR	2	PVWVMWMR2	83350.1	60339	72990.8
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	PVYPGQTLQTEMWK	PVYPGQTLQTEMWK	2	PVYPGQTLQTEMWK2	29075.9	31074.3	25173.3
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	PWALAVR	PWALAVR	2	PWALAVR2	13205.2	11151	7021.51
P05065	Q6AY07;P09117;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	PWALTFSYGR	PWALTFSYGR	2	PWALTFSYGR2	40402.5	32695.6	25465.9
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	PWCATTPNFDEDQQWGYCLEPK	PWC(UniMod:4)ATTPNFDEDQQWGYC(UniMod:4)LEPK	3	PWC(UniMod:4)ATTPNFDEDQQWGYC(UniMod:4)LEPK3	6944.41		
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	PWCFTTDPNK	PWC(UniMod:4)FTTDPNK	2	PWC(UniMod:4)FTTDPNK2	105766	57823.1	86380.8
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	PWCFTTDPNKR	PWC(UniMod:4)FTTDPNKR	3	PWC(UniMod:4)FTTDPNKR3	24140	21858.7	21809.6
F1LQP9	F1LQP9;D3ZER6	F1LQP9_RAT	Tnpo1	Transportin 1	0	PWCTSLR	PWC(UniMod:4)TSLR	2	PWC(UniMod:4)TSLR2	56387	57461	43522.8
O35370	O35370	O35370_RAT	Thbd	Thrombomodulin	1	PWIGLQLPQGCGDPVHLGPLR	PWIGLQLPQGC(UniMod:4)GDPVHLGPLR	3	PWIGLQLPQGC(UniMod:4)GDPVHLGPLR3		10841	10210.9
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	PWIQVDFLR	PWIQVDFLR	2	PWIQVDFLR2	9620.66	10117.3	
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	PWIQVDMEK	PWIQVDMEK	2	PWIQVDMEK2	20201.2	20021.3	12705.4
A0A8I6GF53	A0A8I6GF53	A0A8I6GF53_RAT	ENSRNOG00000067934	Ig-like domain-containing protein	1	PWIYDTSK	PWIYDTSK	2	PWIYDTSK2	169113	134288	134981
A0A8I5ZMT8	A0A8I5ZMT8	A0A8I5ZMT8_RAT	ENSRNOG00000063035	Ig-like domain-containing protein	1	PWIYETSK	PWIYETSK	2	PWIYETSK2	13683.9	11669.2	10475.6
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	PWKPGDKEPCAHPNSR	PWKPGDKEPC(UniMod:4)AHPNSR	4	PWKPGDKEPC(UniMod:4)AHPNSR4	15781.9	17279.1	13091.2
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	PWNVAFLAYETK	PWNVAFLAYETK	2	PWNVAFLAYETK2	16384.6	9012.36	7598.72
Q5XIJ6	Q5XIJ6	BABA1_RAT	Babam1	BRISC and BRCA1-A complex member 1	1	PWQVPAPASEVQIR	PWQVPAPASEVQIR	2	PWQVPAPASEVQIR2	79148.5	95349.1	95903.6
Q6IMY8	Q6IMY8	HNRPU_RAT	Hnrnpu	Heterogeneous nuclear ribonucleoprotein U	1	PWSQHYHQGYY	PWSQHYHQGYY	3	PWSQHYHQGYY3	12150.4		
Q68FX1	Q68FX1	MPI_RAT	Mpi	Mannose-6-phosphate isomerase	1	PYAELWMGAHPR	PYAELWMGAHPR	2	PYAELWMGAHPR2	19719	40668.5	50342
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	PYAFTARPWETR	PYAFTARPWETR	3	PYAFTARPWETR3	62308.7	72942.2	66212
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	PYATDLQAQINAQTQDMK	PYATDLQAQINAQTQDMK	3	PYATDLQAQINAQTQDMK3	45930.9	41555.9	42686
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	PYCQPCFLK	PYC(UniMod:4)QPC(UniMod:4)FLK	2	PYC(UniMod:4)QPC(UniMod:4)FLK2	185890	172238	217341
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	PYDDDAEYMK	PYDDDAEYMK	2	PYDDDAEYMK2	4268.17	3465.48	3333.71
Q3T1K5	Q3T1K5	CAZA2_RAT	Capza2	F-actin-capping protein subunit alpha-2	1	PYEAENAIESWR	PYEAENAIESWR	2	PYEAENAIESWR2	2963.8	1723.43	
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	PYFLEAYRPIR	PYFLEAYRPIR	3	PYFLEAYRPIR3	87191.1	80723.2	75386.7
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	PYFLEAYRPIRK	PYFLEAYRPIRK	4	PYFLEAYRPIRK4	13879	11327.8	19344.3
D3ZUI1	D3ZUI1	D3ZUI1_RAT	Apip	Methylthioribulose-1-phosphate dehydratase	1	PYGAQDK	PYGAQDK	1	PYGAQDK1			11439.3
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	PYGPTSVGLDFSLPGMEHVYGIPEHADSLR	PYGPTSVGLDFSLPGMEHVYGIPEHADSLR	4	PYGPTSVGLDFSLPGMEHVYGIPEHADSLR4	270947	307839	261399
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	PYILTVPSYR	PYILTVPSYR	2	PYILTVPSYR2	2.37706e+06	2.46574e+06	2.17444e+06
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	PYILTVPSYR	PYILTVPSYR	3	PYILTVPSYR3	11774.8	17035.8	15425.9
P08649	P08649	CO4_RAT	C4	Complement C4	1	PYILTVPSYREEIQLDVQAR	PYILTVPSYREEIQLDVQAR	3	PYILTVPSYREEIQLDVQAR3	150544	67557.9	101599
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	PYIQVDIGGGQTK	PYIQVDIGGGQTK	2	PYIQVDIGGGQTK2	14265.6	14061.9	5354.98
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	PYLAWQCHNK	PYLAWQC(UniMod:4)HNK	3	PYLAWQC(UniMod:4)HNK3	5132.78	6318.13	2736.23
P17220	P17220	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	1	PYLFQSDPSGAYFAWK	PYLFQSDPSGAYFAWK	2	PYLFQSDPSGAYFAWK2	28613.1	14503.1	23654.7
A0A8I6A896	A0A8I6A896	A0A8I6A896_RAT	Ap4b1	AP complex subunit beta	1	PYLGSEDVVK	PYLGSEDVVK	2	PYLGSEDVVK2	2765.41		
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	PYLISGADDR	PYLISGADDR	2	PYLISGADDR2	16660.1	19024	14890.5
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PYLPNVDEEVQIGHVPR	PYLPNVDEEVQIGHVPR	3	PYLPNVDEEVQIGHVPR3	161788	163531	140108
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PYLPNVDEEVQIGHVPR	PYLPNVDEEVQIGHVPR	4	PYLPNVDEEVQIGHVPR4	422387	479064	450175
B2RZ72	B2RZ72	B2RZ72_RAT	Arpc4	Actin-related protein 2/3 complex subunit 4	1	PYLSAVR	PYLSAVR	2	PYLSAVR2	17800.8	27685	
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	PYLSPDILEEK	PYLSPDILEEK	2	PYLSPDILEEK2	7897.35	12002.3	12398.3
P09650	P09650	MCPT1_RAT	Mcpt1	Mast cell protease 1	1	PYMAHLEITTER	PYMAHLEITTER	3	PYMAHLEITTER3		2907.76	4614.65
D3ZHR2	D3ZHR2	ABCD1_RAT	Abcd1	ATP-binding cassette sub-family D member 1	1	PYMSVGSLR	PYMSVGSLR	2	PYMSVGSLR2		2457.31	
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	PYMTLGTLR	PYMTLGTLR	2	PYMTLGTLR2	6224.01	2820.63	
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	PYPAHYMDTAIQTYR	PYPAHYMDTAIQTYR	3	PYPAHYMDTAIQTYR3	14178.1	12143.4	17889.7
D3ZFQ8	D3ZFQ8	D3ZFQ8_RAT	Cyc1	Cytochrome c-1	1	PYPNPEAAR	PYPNPEAAR	2	PYPNPEAAR2	59071.3	40599.3	34138.6
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	PYPSDLETTTVITVPTGYR	PYPSDLETTTVITVPTGYR	3	PYPSDLETTTVITVPTGYR3	220065	116858	121298
A0A1W2Q642	A0A1W2Q642	A0A1W2Q642_RAT	Pi16	Peptidase inhibitor 16	1	PYQEGTPCSQCPLGYSCVNSLCEPER	PYQEGTPC(UniMod:4)SQC(UniMod:4)PLGYSC(UniMod:4)VNSLC(UniMod:4)EPER	4	PYQEGTPC(UniMod:4)SQC(UniMod:4)PLGYSC(UniMod:4)VNSLC(UniMod:4)EPER4	2425.57	3540.89	2928.4
A0A1W2Q642	A0A1W2Q642	A0A1W2Q642_RAT	Pi16	Peptidase inhibitor 16	1	PYQEGTPCSQCPLGYSCVNSLCEPERKPEK	PYQEGTPC(UniMod:4)SQC(UniMod:4)PLGYSC(UniMod:4)VNSLC(UniMod:4)EPERKPEK	4	PYQEGTPC(UniMod:4)SQC(UniMod:4)PLGYSC(UniMod:4)VNSLC(UniMod:4)EPERKPEK4	404227	588693	511421
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	PYQGWMMVDCTCLGEGNGR	PYQGWMMVDC(UniMod:4)TC(UniMod:4)LGEGNGR	3	PYQGWMMVDC(UniMod:4)TC(UniMod:4)LGEGNGR3	60156	62325.8	72477.9
Q4KM74	Q4KM74	SC22B_RAT	Sec22b	Vesicle-trafficking protein SEC22b	1	PYSFIEFDTFIQK	PYSFIEFDTFIQK	2	PYSFIEFDTFIQK2	12967.9	12544.2	14059.8
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	PYSFYSSLVSYPEADGGAAPR	PYSFYSSLVSYPEADGGAAPR	3	PYSFYSSLVSYPEADGGAAPR3	93082.7	99888.1	109631
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	PYSGYPDASSEGPEPTPGEAR	PYSGYPDASSEGPEPTPGEAR	3	PYSGYPDASSEGPEPTPGEAR3		2362.47	
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	PYSIHAHGVK	PYSIHAHGVK	2	PYSIHAHGVK2	68154	34307.1	24455.4
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	PYSLHAHGLSYEK	PYSLHAHGLSYEK	2	PYSLHAHGLSYEK2	108461	112772	101208
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	PYSLHAHGLSYEK	PYSLHAHGLSYEK	3	PYSLHAHGLSYEK3	2.60456e+06	2.68427e+06	2.34495e+06
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	PYSQGNPADGPSER	PYSQGNPADGPSER	2	PYSQGNPADGPSER2	128697	96025.5	124167
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	PYSSVPVGSEKPPK	PYSSVPVGSEKPPK	2	PYSSVPVGSEKPPK2	5584.8	3259.78	
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	PYSSVPVGSEKPPK	PYSSVPVGSEKPPK	3	PYSSVPVGSEKPPK3	183493	194012	168039
Q9JHW0	Q9JHW0	PSB7_RAT	Psmb7	Proteasome subunit beta type-7	1	PYSVPNK	PYSVPNK	2	PYSVPNK2	32742.1	28123.8	23780.1
D3ZW15	D3ZW15	D3ZW15_RAT	Sec24b	SEC24 homolog B, COPII coat complex component	1	PYTAPTQNVGTPSSANQPGAQLMYGR	PYTAPTQNVGTPSSANQPGAQLMYGR	3	PYTAPTQNVGTPSSANQPGAQLMYGR3	2025.83	4662.98	
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	PYTFHAHGVTYTK	PYTFHAHGVTYTK	2	PYTFHAHGVTYTK2	22592.2	15706.5	8159.53
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	PYTFHAHGVTYTK	PYTFHAHGVTYTK	3	PYTFHAHGVTYTK3	567338	286214	252905
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	PYTFHAHGVTYTK	PYTFHAHGVTYTK	4	PYTFHAHGVTYTK4	1.40097e+06	1.04191e+06	948188
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	PYTFQVSSGSR	PYTFQVSSGSR	2	PYTFQVSSGSR2	32166.5	20574.4	25361.1
P20070	P20070	NB5R3_RAT	Cyb5r3	NADH-cytochrome b5 reductase 3	1	PYTPVSSDDDK	PYTPVSSDDDK	2	PYTPVSSDDDK2	4703.15	5455.36	
P20070	P20070	NB5R3_RAT	Cyb5r3	NADH-cytochrome b5 reductase 3	1	PYTPVSSDDDKGFVDLVVK	PYTPVSSDDDKGFVDLVVK	3	PYTPVSSDDDKGFVDLVVK3	6117.9		3413.42
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	PYTSFQEFTGEK	PYTSFQEFTGEK	2	PYTSFQEFTGEK2	4480.43	7592.22	5370.52
P01026	P01026	CO3_RAT	C3	Complement C3	1	PYTVAIAGYALALMNK	PYTVAIAGYALALMNK	2	PYTVAIAGYALALMNK2	44371	39166.5	54083.8
P01026	P01026	CO3_RAT	C3	Complement C3	1	PYTVAIAGYALALMNK	PYTVAIAGYALALMNK	3	PYTVAIAGYALALMNK3	60494.9	50364.7	57676.7
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	PYVEEGLHPQIIIR	PYVEEGLHPQIIIR	3	PYVEEGLHPQIIIR3	10144.3	5728.04	4615.57
P00507	P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	1	PYVLPSVR	PYVLPSVR	2	PYVLPSVR2	16289.1	11850.1	14431.6
O55171	O55171	ACOT2_RAT	Acot2	Acyl-coenzyme A thioesterase 2, mitochondrial	1	PYVVELEVLDGHEPDGGQR	PYVVELEVLDGHEPDGGQR	3	PYVVELEVLDGHEPDGGQR3	9372.05		1860.13
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	PYVYDLIAVSNHYGAMGVGHYTAYAK	PYVYDLIAVSNHYGAMGVGHYTAYAK	4	PYVYDLIAVSNHYGAMGVGHYTAYAK4	6800.85	6236.46	4235.81
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	PYYSDVDVTR	PYYSDVDVTR	2	PYYSDVDVTR2	247730	240012	240053
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	QAAASATQTIAAAQHAASAPK	QAAASATQTIAAAQHAASAPK	3	QAAASATQTIAAAQHAASAPK3	2318.11		
P06685	Q64541;P06687;P06685;P06686	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	0	QAADMILLDDNFASIVTGVEEGR	QAADMILLDDNFASIVTGVEEGR	3	QAADMILLDDNFASIVTGVEEGR3	7774.87	10255.9	17894.8
P04797	M0R660;E9PTN6;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	QAAEGPLK	QAAEGPLK	1	QAAEGPLK1	48456	56780.9	45738.2
P04797	M0R660;E9PTN6;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	QAAEGPLK	QAAEGPLK	2	QAAEGPLK2	2.08182e+06	2.21864e+06	2.59084e+06
P04638	P04638	APOA2_RAT	Apoa2	Apolipoprotein A-II	1	QAAETDVQTLFSQYLQSLTDYGK	QAAETDVQTLFSQYLQSLTDYGK	3	QAAETDVQTLFSQYLQSLTDYGK3		7544.58	23083
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	QAAFGSPAWSR	QAAFGSPAWSR	2	QAAFGSPAWSR2	25065.3	21285.3	24316.5
P60570	P60570	PANX1_RAT	Panx1	Pannexin-1	1	QAAFVDSYCWAAVQQK	QAAFVDSYC(UniMod:4)WAAVQQK	2	QAAFVDSYC(UniMod:4)WAAVQQK2	3197.06	5488.83	1015.82
P60570	P60570	PANX1_RAT	Panx1	Pannexin-1	1	QAAFVDSYCWAAVQQK	QAAFVDSYC(UniMod:4)WAAVQQK	3	QAAFVDSYC(UniMod:4)WAAVQQK3	5003.51	10892.8	10432
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	QAAGFTSK	QAAGFTSK	2	QAAGFTSK2		8357.78	
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	QAAHTLDPGKVPEEEK	QAAHTLDPGKVPEEEK	2	QAAHTLDPGKVPEEEK2	5957.68		3060.37
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	QAAHTLDPGKVPEEEK	QAAHTLDPGKVPEEEK	3	QAAHTLDPGKVPEEEK3	70903.1	59668.9	50176.7
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	QAAHTLDPGKVPEEEK	QAAHTLDPGKVPEEEK	4	QAAHTLDPGKVPEEEK4	98613.7	70572.2	89239
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	QAALAGDDR	QAALAGDDR	2	QAALAGDDR2		60550.8	
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	QAALAGDDRNLSVLNAEAQK	QAALAGDDRNLSVLNAEAQK	3	QAALAGDDRNLSVLNAEAQK3	9863.27	16348.9	6258.35
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	QAALAQGR	QAALAQGR	2	QAALAQGR2	165667	179020	187201
O55012	O55012	PICAL_RAT	Picalm	Phosphatidylinositol-binding clathrin assembly protein	1	QAALEEEQAR	QAALEEEQAR	2	QAALEEEQAR2	37208	34350.4	38187.8
Q5M929	Q5M929	RN135_RAT	Rnf135	E3 ubiquitin-protein ligase RNF135	1	QAALELEAGPEPAPVPR	QAALELEAGPEPAPVPR	2	QAALELEAGPEPAPVPR2	1264.15		
P23764	P23764	GPX3_RAT	Gpx3	Glutathione peroxidase 3	1	QAALGAR	QAALGAR	1	QAALGAR1	5489.71	4675.1	
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	QAAPCVLFFDELDSIAK	QAAPC(UniMod:4)VLFFDELDSIAK	2	QAAPC(UniMod:4)VLFFDELDSIAK2	147746	150599	201607
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	QAAPCVLFFDELDSIAK	QAAPC(UniMod:4)VLFFDELDSIAK	3	QAAPC(UniMod:4)VLFFDELDSIAK3	91538.4	81137.1	105454
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	QAAQMYNR	QAAQMYNR	2	QAAQMYNR2		7408.66	15306
D4A3V2	D4A3V2	D4A3V2_RAT	Ndufa6	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6	1	QAASAASTSVKPIFSR	QAASAASTSVKPIFSR	3	QAASAASTSVKPIFSR3	59278.4	41082.1	45809
P60123	P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	1	QAASGLVGQENAR	QAASGLVGQENAR	2	QAASGLVGQENAR2	83323.3	61759.3	87580.8
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	QAASSLQQASLK	QAASSLQQASLK	2	QAASSLQQASLK2	58724.8	47306.4	52089
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	QAATHVSLDQEYDAESSQQWR	QAATHVSLDQEYDAESSQQWR	3	QAATHVSLDQEYDAESSQQWR3	5570.74	6586.67	6854.9
P58751	P58751	RELN_RAT	Reln	Reelin	1	QAATKPLDLTR	QAATKPLDLTR	3	QAATKPLDLTR3	47024.8	66220.2	56976.3
B2RYI2	B2RYI2	B2RYI2_RAT	Srp68	Signal recognition particle subunit SRP68	1	QAATMSEVEWR	QAATMSEVEWR	2	QAATMSEVEWR2	3875.15		
A0A8I6A8Y6	A0A8I6A8Y6	A0A8I6A8Y6_RAT	Sf3b2	Splicing factor 3b, subunit 2	1	QAAVLMEQER	QAAVLMEQER	2	QAAVLMEQER2	9250.16		4959.14
Q6V0K7	Q6V0K7	OIT3_RAT	Oit3	Oncoprotein-induced transcript 3 protein	1	QACASFK	QAC(UniMod:4)ASFK	2	QAC(UniMod:4)ASFK2	38617.5	32003.2	41749.2
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	QACEGNLPR	QAC(UniMod:4)EGNLPR	2	QAC(UniMod:4)EGNLPR2	7727.58		8238.14
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	QACGFEYTSK	QAC(UniMod:4)GFEYTSK	2	QAC(UniMod:4)GFEYTSK2	36326.1	47104.8	31220.7
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	QACGYEFTSK	QAC(UniMod:4)GYEFTSK	2	QAC(UniMod:4)GYEFTSK2	9202.16	8213.17	21805.9
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	QACSPCSSQSSSSGICTDFWDLLVK	QAC(UniMod:4)SPC(UniMod:4)SSQSSSSGIC(UniMod:4)TDFWDLLVK	3	QAC(UniMod:4)SPC(UniMod:4)SSQSSSSGIC(UniMod:4)TDFWDLLVK3	1953.7	4610.23	
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	QACTPMFR	QAC(UniMod:4)TPMFR	2	QAC(UniMod:4)TPMFR2	28078.9	24125.3	27713
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QACVLMIK	QAC(UniMod:4)VLMIK	1	QAC(UniMod:4)VLMIK1	64034.1	85957.7	61937.8
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QACVLMIK	QAC(UniMod:4)VLMIK	2	QAC(UniMod:4)VLMIK2	3.54699e+06	4.752e+06	3.96133e+06
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	QACYTYSLPGK	QAC(UniMod:4)YTYSLPGK	2	QAC(UniMod:4)YTYSLPGK2	573882	560868	605993
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	QACYTYSLPGK	QAC(UniMod:4)YTYSLPGK	3	QAC(UniMod:4)YTYSLPGK3	9355.15	5535.3	7150.68
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	QACYTYSLPGKLPSR	QAC(UniMod:4)YTYSLPGKLPSR	3	QAC(UniMod:4)YTYSLPGKLPSR3	21182.7	40348.8	39310.4
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	QADAVLK	QADAVLK	1	QADAVLK1	55628.6	71402.8	67178.3
B2RZ72	B2RZ72	B2RZ72_RAT	Arpc4	Actin-related protein 2/3 complex subunit 4	1	QADEIEK	QADEIEK	1	QADEIEK1	4837.02	5374.92	2352.57
B2RZ72	B2RZ72	B2RZ72_RAT	Arpc4	Actin-related protein 2/3 complex subunit 4	1	QADEIEK	QADEIEK	2	QADEIEK2	113009	126274	120204
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	QADEKGCFR	QADEKGC(UniMod:4)FR	2	QADEKGC(UniMod:4)FR2	2591.48		11718.8
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	QADELQQPLELK	QADELQQPLELK	2	QADELQQPLELK2	16605.4	6902.59	8353.69
Q3KR59	Q3KR59	UBP10_RAT	Usp10	Ubiquitin carboxyl-terminal hydrolase 10	1	QADFVQTPITGIFGGHIR	QADFVQTPITGIFGGHIR	3	QADFVQTPITGIFGGHIR3	12999.1	11703.4	21069.8
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	QADHEEGQQQYQLR	QADHEEGQQQYQLR	2	QADHEEGQQQYQLR2	2017.37	800.303	
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	QADHEEGQQQYQLR	QADHEEGQQQYQLR	3	QADHEEGQQQYQLR3	31348.5	35545.3	18844.3
G3V9R8	G3V9R8	HNRPC_RAT	Hnrnpc	Heterogeneous nuclear ribonucleoprotein C	1	QADLSFSSPVEMK	QADLSFSSPVEMK	2	QADLSFSSPVEMK2	1500.76	3414.45	3902.43
F7ELS2	A0A8I6AGL9;F7ELS2;Q6AYJ7	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	0	QADLYISEGLHPR	QADLYISEGLHPR	2	QADLYISEGLHPR2	7521.47	9390.35	12975.8
F7ELS2	A0A8I6AGL9;F7ELS2;Q6AYJ7	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	0	QADLYISEGLHPR	QADLYISEGLHPR	3	QADLYISEGLHPR3	40534.7	43795	30281.4
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	QADNPHVALYR	QADNPHVALYR	2	QADNPHVALYR2	23786.5	26044.5	11130.6
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	QADNPHVALYR	QADNPHVALYR	3	QADNPHVALYR3	698296	785640	722851
Q9Z2J5	Q9Z2J5	VAMP5_RAT	Vamp5	Vesicle-associated membrane protein 5	1	QADQVTEIMLNNFDK	QADQVTEIMLNNFDK	2	QADQVTEIMLNNFDK2	4608.49	6804.32	16983.9
Q9Z2J5	Q9Z2J5	VAMP5_RAT	Vamp5	Vesicle-associated membrane protein 5	1	QADQVTEIMLNNFDK	QADQVTEIMLNNFDK	3	QADQVTEIMLNNFDK3	5156.53	4684.04	11639.1
Q5XIT9	Q5XIT9	MCCB_RAT	Mccc2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	1	QADTFPDRDHFGR	QADTFPDRDHFGR	4	QADTFPDRDHFGR4	22960.9	33294.8	20570.3
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	QADTLEQVR	QADTLEQVR	2	QADTLEQVR2	18424.7	19415.3	20082.3
A0A0G2K516	A0A0G2K516	A0A0G2K516_RAT	Stx11	Syntaxin 11	1	QADTLNVIELNVQK	QADTLNVIELNVQK	2	QADTLNVIELNVQK2	288199	256918	238853
A0A0G2K516	A0A0G2K516	A0A0G2K516_RAT	Stx11	Syntaxin 11	1	QADTLNVIELNVQK	QADTLNVIELNVQK	3	QADTLNVIELNVQK3	40266.2	41584.2	40995.5
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	QADTQETPQWEQEYR	QADTQETPQWEQEYR	2	QADTQETPQWEQEYR2	170865	187800	200968
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	QADTQETPQWEQEYR	QADTQETPQWEQEYR	3	QADTQETPQWEQEYR3	77730.4	79998	94638
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	QADVEFELR	QADVEFELR	2	QADVEFELR2	34600.7	32152	25644
F7ELE5	F7ELE5	F7ELE5_RAT	Ndufs7	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial	1	QADVMIVAGTLTNK	QADVMIVAGTLTNK	2	QADVMIVAGTLTNK2	53819.7	43357.1	48337.8
F7ELE5	F7ELE5	F7ELE5_RAT	Ndufs7	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial	1	QADVMIVAGTLTNK	QADVMIVAGTLTNK	3	QADVMIVAGTLTNK3	5949.25	4918.44	2592.33
O08651	O08651	SERA_RAT	Phgdh	D-3-phosphoglycerate dehydrogenase	1	QADVNLVNAK	QADVNLVNAK	2	QADVNLVNAK2	3332.41	4166.49	3671.44
Q5U2N3	Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	1	QADVQTLSTAFEAVTR	QADVQTLSTAFEAVTR	2	QADVQTLSTAFEAVTR2	2499.75	1147.78	
Q5U2N3	Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	1	QADVQTLSTAFEAVTR	QADVQTLSTAFEAVTR	3	QADVQTLSTAFEAVTR3	2205.47	4239.34	
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	QADYEELMGQK	QADYEELMGQK	2	QADYEELMGQK2	5394.12	5726.53	5406.07
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	QAEAFLNNQEYVLAHTEMPTTLEGAEAAIK	QAEAFLNNQEYVLAHTEMPTTLEGAEAAIK	4	QAEAFLNNQEYVLAHTEMPTTLEGAEAAIK4	17764.2	27040.9	36550.4
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	QAEAILSNQEYTLAHLEPPDSLAAAEAGIR	QAEAILSNQEYTLAHLEPPDSLAAAEAGIR	4	QAEAILSNQEYTLAHLEPPDSLAAAEAGIR4	10606.9	10061.5	13668.4
P35053	P35053	GPC1_RAT	Gpc1	Glypican-1	1	QAEALRPFGDAPR	QAEALRPFGDAPR	3	QAEALRPFGDAPR3	38548.1	41301	33263.9
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	QAEAMALLAEAER	QAEAMALLAEAER	2	QAEAMALLAEAER2	257051	193858	202064
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	QAEAMALLAEAER	QAEAMALLAEAER	3	QAEAMALLAEAER3	36756	38995	38570.8
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	QAEAMALLAEAERK	QAEAMALLAEAERK	3	QAEAMALLAEAERK3	23614.9	20311.7	20596.7
Q9QX69	Q9QX69	LANC1_RAT	Lancl1	Glutathione S-transferase LANCL1	1	QAEDCITR	QAEDC(UniMod:4)ITR	2	QAEDC(UniMod:4)ITR2	3378.01	7638.41	4911.86
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	QAEENLHDQVQEQK	QAEENLHDQVQEQK	3	QAEENLHDQVQEQK3	9460.46	12194.2	15718.8
Q3MID3	Q3MID3	ARFG2_RAT	Arfgap2	ADP-ribosylation factor GTPase-activating protein 2	1	QAEESMVASMR	QAEESMVASMR	2	QAEESMVASMR2		8225.18	
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	QAEETYENIPGR	QAEETYENIPGR	2	QAEETYENIPGR2	109427	154234	151504
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	QAEETYENIPGR	QAEETYENIPGR	3	QAEETYENIPGR3	25013.5	15804.8	23930.7
Q99M64	Q99M64	P4K2A_RAT	Pi4k2a	Phosphatidylinositol 4-kinase type 2-alpha	1	QAEIAIECSIYPER	QAEIAIEC(UniMod:4)SIYPER	2	QAEIAIEC(UniMod:4)SIYPER2	4097.78	2086.94	
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	QAEIENPLEDPVTGDYVHK	QAEIENPLEDPVTGDYVHK	3	QAEIENPLEDPVTGDYVHK3	25512	28799.2	22410.9
Q6PEC1	F1M825;Q6PEC1	TBCA_RAT	Tbca	Tubulin-specific chaperone A	0	QAEILQESR	QAEILQESR	2	QAEILQESR2	29350.3	19404.2	24931.6
B2RZB5	B2RZB5	B2RZB5_RAT	Chmp2a	Charged multivesicular body protein 2A	1	QAEIMDMK	QAEIMDMK	2	QAEIMDMK2	15380.1	14631	8231.38
B1WBT4	B1WBT4;Q4KLN3	B1WBT4_RAT	Srpk2	SRSF protein kinase 2	0	QAELLEK	QAELLEK	2	QAELLEK2	14184.2	14205.9	5865.27
D3ZDR2	D3ZDR2	D3ZDR2_RAT	Chmp6	Charged multivesicular body protein 6	1	QAELVAAS	QAELVAAS	1	QAELVAAS1	2389.77	2112.37	3362.91
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	QAEMEGAVQSIQGELSK	QAEMEGAVQSIQGELSK	2	QAEMEGAVQSIQGELSK2	136174	95865.1	124402
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	QAEMEGAVQSIQGELSK	QAEMEGAVQSIQGELSK	3	QAEMEGAVQSIQGELSK3	43542.5	58300.5	48493.3
P29410	A0A8I5ZQQ9;P29410	KAD2_RAT	Ak2	Adenylate kinase 2, mitochondrial	0	QAEMLDDLMDK	QAEMLDDLMDK	2	QAEMLDDLMDK2	88454	91406.5	104065
P29410	A0A8I5ZQQ9;P29410	KAD2_RAT	Ak2	Adenylate kinase 2, mitochondrial	0	QAEMLDDLMDKR	QAEMLDDLMDKR	3	QAEMLDDLMDKR3	5699.04	5206.24	6419.86
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	QAENGMYIR	QAENGMYIR	2	QAENGMYIR2	9176	3690.48	6731.13
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	QAEPEKEDIMVMDTK	QAEPEKEDIMVMDTK	3	QAEPEKEDIMVMDTK3	13812.8	11698.3	8704.81
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	QAESASEAAK	QAESASEAAK	2	QAESASEAAK2			7851.02
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	QAETLYK	QAETLYK	2	QAETLYK2	31296.7	40851.5	57387.6
Q5M9G8	Q5M9G8	DCA11_RAT	Dcaf11	DDB1- and CUL4-associated factor 11	1	QAEYFQDDMTESDR	QAEYFQDDMTESDR	2	QAEYFQDDMTESDR2	1686.46	1677.14	
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	QAFAELQSCLMDR	QAFAELQSC(UniMod:4)LMDR	2	QAFAELQSC(UniMod:4)LMDR2	8654.32	8378.47	4955.71
B0BMY7	A0A8I6AHG1;B0BMY7	B0BMY7_RAT	Twf2	Twinfilin actin-binding protein 2	0	QAFAKPK	QAFAKPK	2	QAFAKPK2	4927		
Q7TP54	Q7TP54	RIPR2_RAT	Ripor2	Rho family-interacting cell polarization regulator 2	1	QAFATSPASK	QAFATSPASK	2	QAFATSPASK2	10050.9	9951.1	3943.4
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	QAFDDAIAELDTLNEDSYK	QAFDDAIAELDTLNEDSYK	3	QAFDDAIAELDTLNEDSYK3	73289.9	67475.7	78434
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	QAFDGFAALGVSR	QAFDGFAALGVSR	2	QAFDGFAALGVSR2	55244.3	63817.2	55670.6
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	QAFDQVLQDR	QAFDQVLQDR	2	QAFDQVLQDR2	32953.2	24787.9	31858.7
D3ZFK6	D3ZFK6	D3ZFK6_RAT	Atg16l1	Autophagy related 16-like 1	1	QAFEEIILQYTK	QAFEEIILQYTK	2	QAFEEIILQYTK2	3031.78	4919.14	3113.49
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	QAFEGEYPK	QAFEGEYPK	2	QAFEGEYPK2	19271.9	14082.9	10666.2
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	QAFENGVR	QAFENGVR	2	QAFENGVR2	51836.7	50918.2	60365.1
Q5PPI8	Q5PPI8	Q5PPI8_RAT	Rmc1	Regulator of MON1-CCZ1	1	QAFGEQALMRPTTF	QAFGEQALMRPTTF	2	QAFGEQALMRPTTF2	4233	6502.12	
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	QAFLEDVR	QAFLEDVR	2	QAFLEDVR2	11152.8	10444.3	10098.9
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	QAFLEDVRK	QAFLEDVRK	2	QAFLEDVRK2	2676.51	4077	2851.83
B1WC97	B1WC97	KCTD7_RAT	Kctd7	BTB/POZ domain-containing protein KCTD7	1	QAFLGLMPYYK	QAFLGLMPYYK	2	QAFLGLMPYYK2	3402.89		
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	QAFLLPICEAAAMR	QAFLLPIC(UniMod:4)EAAAMR	2	QAFLLPIC(UniMod:4)EAAAMR2	15556.4	19344.5	24881.4
A0A0G2JWD0	A0A0G2JWD0	A0A0G2JWD0_RAT	Prom1	Prominin 1	1	QAFLMDAQNIR	QAFLMDAQNIR	2	QAFLMDAQNIR2	18279.5	19506.2	12512.3
Q63450	Q63450;A0A8I6AUH0	KCC1A_RAT	Camk1	Calcium/calmodulin-dependent protein kinase type 1	0	QAFNATAVVR	QAFNATAVVR	2	QAFNATAVVR2	11811.4	9395.49	7964.91
Q68FR6	Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	1	QAFPNTNR	QAFPNTNR	2	QAFPNTNR2	580942	752841	835103
D3ZR63	D3ZR63	D3ZR63_RAT	Gfod1	Glucose-fructose oxidoreductase domain containing 1	1	QAFQDQDDRR	QAFQDQDDRR	3	QAFQDQDDRR3	6675.29		6444.63
Q03343	Q04400;Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	0	QAFQETR	QAFQETR	2	QAFQETR2	80528.6	102300	104695
Q9Z272	Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	1	QAFSMYEPGSALKPFGGAPGDELATR	QAFSMYEPGSALKPFGGAPGDELATR	3	QAFSMYEPGSALKPFGGAPGDELATR3	8412.21	6876.69	
D3ZGN0	D3ZGN0	D3ZGN0_RAT	Tbc1d4	TBC1 domain family, member 4	1	QAFSTAAALQSAK	QAFSTAAALQSAK	2	QAFSTAAALQSAK2	2228.32	3589.83	
Q8VHE9	Q8VHE9	RETST_RAT	Retsat	All-trans-retinol 13,14-reductase	1	QAFSVSR	QAFSVSR	2	QAFSVSR2	18337.7	21583.7	10204.2
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	QAFTDVATGSLGQGLGAACGMAYTGK	QAFTDVATGSLGQGLGAAC(UniMod:4)GMAYTGK	3	QAFTDVATGSLGQGLGAAC(UniMod:4)GMAYTGK3	19148.2	16384.3	21577.8
Q29RW1	P12847;Q29RW1	MYH4_RAT	Myh4	Myosin-4	0	QAFTQQIEELKR	QAFTQQIEELKR	3	QAFTQQIEELKR3	6576.08	5147.37	7296.25
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	QAFTVAAVQQTAK	QAFTVAAVQQTAK	2	QAFTVAAVQQTAK2	11170.2	13132.1	18596.2
P48199	P48199	CRP_RAT	Crp	C-reactive protein	1	QAFVFPGVSATAYVSLEAESK	QAFVFPGVSATAYVSLEAESK	3	QAFVFPGVSATAYVSLEAESK3	797322	588991	671608
P48199	P48199	CRP_RAT	Crp	C-reactive protein	1	QAFVFPGVSATAYVSLEAESKK	QAFVFPGVSATAYVSLEAESKK	3	QAFVFPGVSATAYVSLEAESKK3	69430	84035.1	73655.8
Q9Z1S7	Q9Z1S7	OMD_RAT	Omd	Osteomodulin	1	QAFYIPR	QAFYIPR	2	QAFYIPR2	748761	749582	827537
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	QAGASVLPVETEAQENVVAQK	QAGASVLPVETEAQENVVAQK	3	QAGASVLPVETEAQENVVAQK3	4184.19	8149.8	8467.37
P97697	P97697	IMPA1_RAT	Impa1	Inositol monophosphatase 1	1	QAGEMIR	QAGEMIR	2	QAGEMIR2	23978.7	24487.5	27424.4
G3V6S8	G3V798;G3V6S8	SRSF6_RAT	Srsf6	Serine/arginine-rich splicing factor 6	0	QAGEVTYADAHK	QAGEVTYADAHK	3	QAGEVTYADAHK3	5669.25	3061.95	5405.48
Q5I0H4	Q5I0H4	TMCO1_RAT	Tmco1	Calcium load-activated calcium channel	1	QAGGFLGPPPPSGK	QAGGFLGPPPPSGK	2	QAGGFLGPPPPSGK2	21476.9	20754.8	28062.7
Q69BT7	Q69BT7	TPPC4_RAT	Trappc4	Trafficking protein particle complex subunit 4	1	QAGIDSLLR	QAGIDSLLR	2	QAGIDSLLR2	21369.7	17109.9	20125
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	QAGIEPGPDTYLALLNAHAEK	QAGIEPGPDTYLALLNAHAEK	3	QAGIEPGPDTYLALLNAHAEK3	9486.5	17128.1	8634.63
Q2KMM2	Q2KMM2	TPPC1_RAT	Trappc1	Trafficking protein particle complex subunit 1	1	QAGIPKEEEYK	QAGIPKEEEYK	3	QAGIPKEEEYK3	6517.56	7799.1	11010.6
Q8K3P7	Q8K3P7	HINT3_RAT	Hint3	Adenosine 5'-monophosphoramidase HINT3	1	QAGLAGEPNPDCTVTAK	QAGLAGEPNPDC(UniMod:4)TVTAK	2	QAGLAGEPNPDC(UniMod:4)TVTAK2	5935.34	8818.42	9024.42
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	QAGLSTHLSGK	QAGLSTHLSGK	2	QAGLSTHLSGK2	58494.8	48691.2	45918
P29418	P29418	ATP5E_RAT	Atp5f1e	ATP synthase subunit epsilon, mitochondrial	1	QAGLSYIR	QAGLSYIR	2	QAGLSYIR2	327170	279925	350222
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	QAGPASVPLR	QAGPASVPLR	2	QAGPASVPLR2	145258	107241	140671
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	QAGPASVPLRTEDEFK	QAGPASVPLRTEDEFK	2	QAGPASVPLRTEDEFK2	1454.71		1964.52
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	QAGPASVPLRTEDEFK	QAGPASVPLRTEDEFK	3	QAGPASVPLRTEDEFK3	84476.9	65810.2	55402.4
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	QAGPASVPLRTEDEFKK	QAGPASVPLRTEDEFKK	3	QAGPASVPLRTEDEFKK3	28907.4	32651.3	25643.8
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	QAGPASVPLRTEDEFKK	QAGPASVPLRTEDEFKK	4	QAGPASVPLRTEDEFKK4	207024	202915	208097
A0A0G2JTG3	A0A0G2JTG3	A0A0G2JTG3_RAT	Susd1	Sushi domain containing 1	1	QAGSEQMYQVEALGQR	QAGSEQMYQVEALGQR	2	QAGSEQMYQVEALGQR2	11400.6	9840.12	13731.1
A0A0G2JTG3	A0A0G2JTG3	A0A0G2JTG3_RAT	Susd1	Sushi domain containing 1	1	QAGSEQMYQVEALGQR	QAGSEQMYQVEALGQR	3	QAGSEQMYQVEALGQR3	22727.3	20191.7	10686.5
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	QAGTPGFLTSPELHR	QAGTPGFLTSPELHR	3	QAGTPGFLTSPELHR3	16693.6	15770.1	12155.9
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	QAGVFEPTIVK	QAGVFEPTIVK	2	QAGVFEPTIVK2	323907	292825	329159
P11951	P11951	CX6C2_RAT	Cox6c2	Cytochrome c oxidase subunit 6C-2	1	QAGVFQSAK	QAGVFQSAK	1	QAGVFQSAK1	9353.1	8528.77	6389.07
P11951	P11951	CX6C2_RAT	Cox6c2	Cytochrome c oxidase subunit 6C-2	1	QAGVFQSAK	QAGVFQSAK	2	QAGVFQSAK2	443685	429888	447903
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	QAGVIYLK	QAGVIYLK	2	QAGVIYLK2	40665.3	35703.1	46251.3
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	QAGWQDVLTR	QAGWQDVLTR	2	QAGWQDVLTR2	157617	215421	170351
A0A0G2K0W3	A0A0G2K0W3	A0A0G2K0W3_RAT	Ttyh3	Protein tweety homolog	1	QAHDSLYR	QAHDSLYR	2	QAHDSLYR2		8658.92	1896.38
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	QAHDTINIEECSLAQQNK	QAHDTINIEEC(UniMod:4)SLAQQNK	3	QAHDTINIEEC(UniMod:4)SLAQQNK3	891.58	3162.46	3023.27
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	QAHILLDCGEDNVCKPK	QAHILLDC(UniMod:4)GEDNVC(UniMod:4)KPK	3	QAHILLDC(UniMod:4)GEDNVC(UniMod:4)KPK3	18102.7	14611.3	12992.2
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	QAHILLDCGEDNVCKPK	QAHILLDC(UniMod:4)GEDNVC(UniMod:4)KPK	4	QAHILLDC(UniMod:4)GEDNVC(UniMod:4)KPK4	63312.3	77474.3	64566.8
P63324	A0A8I6GKR8;A0A8I5ZX29;D3ZHB3;P63324;A0A8I6AKK1	RS12_RAT	Rps12	Small ribosomal subunit protein eS12	0	QAHLCVLASNCDEPMYVK	QAHLC(UniMod:4)VLASNC(UniMod:4)DEPMYVK	3	QAHLC(UniMod:4)VLASNC(UniMod:4)DEPMYVK3	11104.9	8470.85	9057.84
Q9EPH8	Q9EPH8	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	1	QAHLTNQYMQR	QAHLTNQYMQR	2	QAHLTNQYMQR2	6034.8		4477.89
Q9EPH8	Q9EPH8	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	1	QAHLTNQYMQR	QAHLTNQYMQR	3	QAHLTNQYMQR3	42449.3	58727.1	60099.1
Q5M7T1	Q5M7T1	CIAO1_RAT	Ciao1	Probable cytosolic iron-sulfur protein assembly protein CIAO1	1	QAHSQDVNCVAWNPK	QAHSQDVNC(UniMod:4)VAWNPK	2	QAHSQDVNC(UniMod:4)VAWNPK2	3800.26		5861.9
Q5M7T1	Q5M7T1	CIAO1_RAT	Ciao1	Probable cytosolic iron-sulfur protein assembly protein CIAO1	1	QAHSQDVNCVAWNPK	QAHSQDVNC(UniMod:4)VAWNPK	3	QAHSQDVNC(UniMod:4)VAWNPK3	55109.9	52900.6	67191
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	QAHTMDPQLR	QAHTMDPQLR	2	QAHTMDPQLR2	6856.1	6240.92	1967.32
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	QAHTMDPQLR	QAHTMDPQLR	3	QAHTMDPQLR3	46449.1	47936.3	39216.3
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	QAIEELEGAAESK	QAIEELEGAAESK	2	QAIEELEGAAESK2	1443.95	3573.11	5017.99
A0A8I5ZQE4	A0A8I5ZQE4	A0A8I5ZQE4_RAT	Supt5h	Transcription elongation factor SPT5	1	QAIEGVGNLR	QAIEGVGNLR	2	QAIEGVGNLR2	5361.76		
P26431	P26431	SL9A1_RAT	Slc9a1	Sodium/hydrogen exchanger 1	1	QAIELVESGGMGK	QAIELVESGGMGK	2	QAIELVESGGMGK2	28534.6	30214.1	40843.6
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	QAIGIALETR	QAIGIALETR	2	QAIGIALETR2	89398	101461	89736.7
A0A8I6AE33	A0A8I6AE33	A0A8I6AE33_RAT	Wdr37	WD repeat domain 37	1	QAIGWNINIPALLQEK	QAIGWNINIPALLQEK	2	QAIGWNINIPALLQEK2	4882.88	6480.76	7513.71
A0A8I6AE33	A0A8I6AE33	A0A8I6AE33_RAT	Wdr37	WD repeat domain 37	1	QAIGWNINIPALLQEK	QAIGWNINIPALLQEK	3	QAIGWNINIPALLQEK3	5647.53	4208.93	
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	QAILATDLALYIK	QAILATDLALYIK	2	QAILATDLALYIK2	109969	120715	115471
A0A0G2K012	A0A0G2K012	A0A0G2K012_RAT	Ubxn6	UBX domain protein 6	1	QAILSHFSTDPVAASIMK	QAILSHFSTDPVAASIMK	3	QAILSHFSTDPVAASIMK3	7596.06	3882.22	9428.62
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	QAIPLDQNEGIYVQDVK	QAIPLDQNEGIYVQDVK	2	QAIPLDQNEGIYVQDVK2	126094	120861	133881
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	QAIPLDQNEGIYVQDVK	QAIPLDQNEGIYVQDVK	3	QAIPLDQNEGIYVQDVK3	48025.6	52691.2	46169.5
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	QAIQEELNK	QAIQEELNK	2	QAIQEELNK2	16241.8	13048.4	13591.5
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	QAISMRPDFK	QAISMRPDFK	3	QAISMRPDFK3	14229.7	8304.77	
P58751	P58751	RELN_RAT	Reln	Reelin	1	QAITQDLDLR	QAITQDLDLR	2	QAITQDLDLR2	57169.8	47076	64976.2
Q63965	Q63965	SFXN1_RAT	Sfxn1	Sideroflexin-1	1	QAITQVVISR	QAITQVVISR	2	QAITQVVISR2	141703	165826	126739
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	QAIVAMMNR	QAIVAMMNR	2	QAIVAMMNR2	15588.9	15782.4	25178.4
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	QAIVDKVPSVSSSALVSSLHLLK	QAIVDKVPSVSSSALVSSLHLLK	3	QAIVDKVPSVSSSALVSSLHLLK3	19488.2	20327.9	14139.3
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	QAIVDKVPSVSSSALVSSLHLLK	QAIVDKVPSVSSSALVSSLHLLK	4	QAIVDKVPSVSSSALVSSLHLLK4	58452.6	80369.3	79553.9
D3ZLA3	D3ZLA3	D3ZLA3_RAT	Cpne3	Copine 3	1	QAIVSAAK	QAIVSAAK	2	QAIVSAAK2	23003.8	25243.4	27852.8
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QAKEERTFHIFYYLLSGAGEHLK	QAKEERTFHIFYYLLSGAGEHLK	4	QAKEERTFHIFYYLLSGAGEHLK4	22863.3	23920.4	18708
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	QALADQLK	QALADQLK	2	QALADQLK2	30579.4	32044.3	32552.4
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	QALAHGLK	QALAHGLK	2	QALAHGLK2	10474.3	14975	14357.9
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	QALAIANQDR	QALAIANQDR	2	QALAIANQDR2	21861	20704.3	8359.57
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	QALAIANQDREK	QALAIANQDREK	3	QALAIANQDREK3	5526.93	24184.8	4048.12
A0A0G2K1A2	A0A0G2K1A2	A0A0G2K1A2_RAT	Mpo	Myeloperoxidase	1	QALATISLPR	QALATISLPR	2	QALATISLPR2	23000.3	14906.9	11468.1
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	QALAVMNCEVLQVLQLSDTAIIPISHR	QALAVMNC(UniMod:4)EVLQVLQLSDTAIIPISHR	4	QALAVMNC(UniMod:4)EVLQVLQLSDTAIIPISHR4	4007.39	3132.26	3340.85
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	QALCPGSTR	QALC(UniMod:4)PGSTR	2	QALC(UniMod:4)PGSTR2	141373	109108	129931
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	QALEAELQEQR	QALEAELQEQR	2	QALEAELQEQR2	4084.16	2112.42	1931.23
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	QALEALPQLASGADK	QALEALPQLASGADK	2	QALEALPQLASGADK2	7982.58	6776.24	6127
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	QALEALPQLASGADKK	QALEALPQLASGADKK	3	QALEALPQLASGADKK3	3094.4	2749	2463.28
P37285	A0A8I5Y868;P37285	KLC1_RAT	Klc1	Kinesin light chain 1	0	QALEDLEK	QALEDLEK	2	QALEDLEK2	75154.5	93699.9	89049.4
Q5PQM2	Q5PQM2;Q68G30	KLC4_RAT	Klc4	Kinesin light chain 4	0	QALEDLER	QALEDLER	2	QALEDLER2	24364.7	35382	20465.8
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	QALEEAQK	QALEEAQK	2	QALEEAQK2	18157.4	19646	18950.4
P09760	P09760	FER_RAT	Fer	Tyrosine-protein kinase Fer	1	QALEELK	QALEELK	1	QALEELK1	119921	127304	108923
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	QALELLGK	QALELLGK	2	QALELLGK2	6738.23	9548.04	9644.12
F7EWF8	F7EWF8	F7EWF8_RAT	Anapc2	Anaphase-promoting complex subunit 2	1	QALEQFNQLSQVLHR	QALEQFNQLSQVLHR	3	QALEQFNQLSQVLHR3	10774.7		5647.89
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	QALESILASDR	QALESILASDR	2	QALESILASDR2	38578.8	41631.2	41480.9
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	QALETAVNISVK	QALETAVNISVK	2	QALETAVNISVK2	1828.64	739.526	
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QALETVNDYNPLMK	QALETVNDYNPLMK	2	QALETVNDYNPLMK2	43597.7	62018.1	61455.6
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QALETVNDYNPLMK	QALETVNDYNPLMK	3	QALETVNDYNPLMK3	17239.8	19622.7	14957.8
Q5M872	Q5M872	DPEP2_RAT	Dpep2	Dipeptidase 2	1	QALEVSQAPVIFSHSAAR	QALEVSQAPVIFSHSAAR	3	QALEVSQAPVIFSHSAAR3	18882.3	20863	17119.5
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	QALFVLPR	QALFVLPR	2	QALFVLPR2	75205.6	65812.2	66267.7
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	QALFVLPRPTR	QALFVLPRPTR	3	QALFVLPRPTR3	239684	314250	283495
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	QALHEVHPISSGLEAMALK	QALHEVHPISSGLEAMALK	3	QALHEVHPISSGLEAMALK3	6942.19	4341.26	11343.3
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	QALHEVHPISSGLEAMALK	QALHEVHPISSGLEAMALK	4	QALHEVHPISSGLEAMALK4	9039.55	15433	36130.9
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	QALLEQQR	QALLEQQR	2	QALLEQQR2	34924.2	41621.4	32564.1
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	QALLQYK	QALLQYK	2	QALLQYK2	9053.53		4652.09
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	QALLWGCR	QALLWGC(UniMod:4)R	2	QALLWGC(UniMod:4)R2	20927.4	11331.9	15988.5
Q5XIS9	Q5XIS9	KPCD2_RAT	Prkd2	Serine/threonine-protein kinase D2	1	QALMPVILQDAPSAPGHTPHR	QALMPVILQDAPSAPGHTPHR	4	QALMPVILQDAPSAPGHTPHR4	5323.37		3489.4
A0A8I6AD03	A0A8I6AD03	A0A8I6AD03_RAT	Aplp1	Amyloid beta precursor like protein 1	1	QALNEHFQSILQTLEEQVSGER	QALNEHFQSILQTLEEQVSGER	3	QALNEHFQSILQTLEEQVSGER3	10617.5		22710.4
A0A8I6AD03	A0A8I6AD03	A0A8I6AD03_RAT	Aplp1	Amyloid beta precursor like protein 1	1	QALNEHFQSILQTLEEQVSGER	QALNEHFQSILQTLEEQVSGER	4	QALNEHFQSILQTLEEQVSGER4		2651.48	
Q08850	Q08850	STX4_RAT	Stx4	Syntaxin-4	1	QALNEISAR	QALNEISAR	2	QALNEISAR2	42894.6	36570.3	51758.8
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	QALNGLSQLTYSSGGPTK	QALNGLSQLTYSSGGPTK	2	QALNGLSQLTYSSGGPTK2	12390	10707.4	6379.96
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	QALNSVVK	QALNSVVK	2	QALNSVVK2	26629.7	30557.5	22490.4
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	QALNTLLFEQQQK	QALNTLLFEQQQK	2	QALNTLLFEQQQK2	11324	9716.26	14052.8
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	QALNTLLFEQQQK	QALNTLLFEQQQK	3	QALNTLLFEQQQK3	4598.91	9516.93	4137.18
Q5XHZ9	Q5XHZ9	PCH2_RAT	Trip13	Pachytene checkpoint protein 2 homolog	1	QALPCVAESPAVHVEVLQR	QALPC(UniMod:4)VAESPAVHVEVLQR	3	QALPC(UniMod:4)VAESPAVHVEVLQR3	8888.36	19947.6	10389.6
A0A0U1RRS5	A0A0U1RRS5	A0A0U1RRS5_RAT	Smg7	Nonsense-mediated mRNA decay factor	1	QALQDLYQK	QALQDLYQK	2	QALQDLYQK2	4253.38		3908.6
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	QALQDTLALYK	QALQDTLALYK	2	QALQDTLALYK2	160653	180025	220459
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	QALQEHQEQASTIFSLR	QALQEHQEQASTIFSLR	3	QALQEHQEQASTIFSLR3	29261.7	26264.9	15660.1
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	QALQESLVQILQPQR	QALQESLVQILQPQR	2	QALQESLVQILQPQR2	14755.7	9820.92	7907.71
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	QALQESLVQILQPQR	QALQESLVQILQPQR	3	QALQESLVQILQPQR3	6677.98	9650.4	12999.2
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	QALQGCSLR	QALQGC(UniMod:4)SLR	2	QALQGC(UniMod:4)SLR2	7937.18		9255.02
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	QALQLQGDDANSLHLLALLLSAQK	QALQLQGDDANSLHLLALLLSAQK	3	QALQLQGDDANSLHLLALLLSAQK3	4661.97		5683.48
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	QALQTDPATVK	QALQTDPATVK	2	QALQTDPATVK2	33621.1	39262.5	40558.3
D3ZUU6	D3ZUU6	D3ZUU6_RAT	Clec3b	C-type lectin domain family 3, member B	1	QALQTVCLK	QALQTVC(UniMod:4)LK	2	QALQTVC(UniMod:4)LK2	32996.3	32708.9	31291.2
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	QALSEVTAALR	QALSEVTAALR	2	QALSEVTAALR2	235029	264920	239117
G3V7W1	G3V7W1	PDCD6_RAT	Pdcd6	Programmed cell death protein 6	1	QALSGFGYR	QALSGFGYR	2	QALSGFGYR2	26691.3	29305.1	26912
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	QALTDFLLAR	QALTDFLLAR	2	QALTDFLLAR2	18061.9	10787.8	14045.6
P70569	P70569	MYO5B_RAT	Myo5b	Unconventional myosin-Vb	1	QALTLLGVR	QALTLLGVR	2	QALTLLGVR2		5826.86	
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QALVAIFTHLR	QALVAIFTHLR	2	QALVAIFTHLR2	18017.1	27217.3	13703.4
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QALVAIFTHLR	QALVAIFTHLR	3	QALVAIFTHLR3	119397	146101	117613
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QALVAIFTHLRK	QALVAIFTHLRK	3	QALVAIFTHLRK3	10576.5	3907.61	6176.77
A4V8B4	A4V8B4	SAV1_RAT	Sav1	Protein salvador homolog 1	1	QALVTELENR	QALVTELENR	2	QALVTELENR2	6237.8	5475.75	4602.84
A1L134	A1L134	AUP1_RAT	Aup1	Lipid droplet-regulating VLDL assembly factor AUP1	1	QALYEYAR	QALYEYAR	2	QALYEYAR2	24868.1	56518.4	29306.4
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	QAMGLHVPIIER	QAMGLHVPIIER	2	QAMGLHVPIIER2		3287.32	
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	QAMGLHVPIIER	QAMGLHVPIIER	3	QAMGLHVPIIER3	140436	158090	126520
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	QAMLENASDIK	QAMLENASDIK	2	QAMLENASDIK2	28726.9	44847.3	40512.3
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	QAMLENASDIKLEK	QAMLENASDIKLEK	3	QAMLENASDIKLEK3	4674.5	4767.9	7172.68
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	QAMLHYLLPWMNNIELVDVRPLPSGR	QAMLHYLLPWMNNIELVDVRPLPSGR	4	QAMLHYLLPWMNNIELVDVRPLPSGR4	10706.3	15407.5	24918.1
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	QAMMQLYVLK	QAMMQLYVLK	2	QAMMQLYVLK2	19877.4	24811.8	19549.7
D4A7S6	D4A7S6	D4A7S6_RAT	Smco4	Single-pass membrane and coiled-coil domain-containing protein 4	1	QAMQEAR	QAMQEAR	2	QAMQEAR2			34641.3
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	QAMSPSVAECAR	QAMSPSVAEC(UniMod:4)AR	2	QAMSPSVAEC(UniMod:4)AR2	19957.4	26291.5	18483.2
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	QANCFNTNYLR	QANC(UniMod:4)FNTNYLR	2	QANC(UniMod:4)FNTNYLR2	368817	327175	287803
Q6AY49	Q6AY49	Q6AY49_RAT	Tusc3	Tumor suppressor candidate 3	1	QANEEYQILANSWR	QANEEYQILANSWR	2	QANEEYQILANSWR2	1244.22	1598.91	2543.06
Q6AY49	Q6AY49	Q6AY49_RAT	Tusc3	Tumor suppressor candidate 3	1	QANEEYQILANSWR	QANEEYQILANSWR	3	QANEEYQILANSWR3	2399.24	2064.06	6578.55
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	QANMDER	QANMDER	2	QANMDER2			232873
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	QAPDVVLDTLEPLK	QAPDVVLDTLEPLK	2	QAPDVVLDTLEPLK2	6958.87	8901.66	11717.4
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	QAPESSAEWLHAYDVCLK	QAPESSAEWLHAYDVC(UniMod:4)LK	3	QAPESSAEWLHAYDVC(UniMod:4)LK3	2824.91		
F1LVX1	F1LVX1	F1LVX1_RAT	Dnajc1	DnaJ heat shock protein family (Hsp40) member C1	1	QAPEWTEEDLSQLTR	QAPEWTEEDLSQLTR	3	QAPEWTEEDLSQLTR3	2101.27	1772.86	3101.33
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	QAPGGPQEAVQVR	QAPGGPQEAVQVR	2	QAPGGPQEAVQVR2	19890.7	34498.7	31954.2
A0A8I6ABN8	A0A8I6ABN8	A0A8I6ABN8_RAT	ENSRNOG00000065459	Ig-like domain-containing protein	1	QAPGNGLK	QAPGNGLK	2	QAPGNGLK2	42491.1	43262.6	56037.5
D3ZZJ7	D3ZZJ7	D3ZZJ7_RAT	Dcp1b	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	QAPLLQSTCAPLR	QAPLLQSTC(UniMod:4)APLR	2	QAPLLQSTC(UniMod:4)APLR2	8202.84	8892.51	3610.88
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	QAPQTVHLPSGETLDVFDAAER	QAPQTVHLPSGETLDVFDAAER	3	QAPQTVHLPSGETLDVFDAAER3	11193.5	8860.84	3784.98
Q63190	Q63190	EMD_RAT	Emd	Emerin	1	QAPTAALGQDR	QAPTAALGQDR	2	QAPTAALGQDR2	18189.6	24155.3	17924.7
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	QAPVPVFGPTPR	QAPVPVFGPTPR	2	QAPVPVFGPTPR2	97050.9	100710	84255
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	QAQCGQDFQCR	QAQC(UniMod:4)GQDFQC(UniMod:4)R	2	QAQC(UniMod:4)GQDFQC(UniMod:4)R2	94623.6	95088.8	111822
P08644	P08644	RASK_RAT	Kras	GTPase KRas	1	QAQELAR	QAQELAR	2	QAQELAR2	28178.4	31649	27115.2
P23358	P23358;A0A8I6A1H0;D3ZJE2;D4A8N3	RL12_RAT	Rpl12	Large ribosomal subunit protein uL11	0	QAQIEVVPSASALIIK	QAQIEVVPSASALIIK	2	QAQIEVVPSASALIIK2	11676.7	9856.15	14001.4
Q4FZT0	Q4FZT0	STML2_RAT	Stoml2	Stomatin-like protein 2, mitochondrial	1	QAQILASEAEK	QAQILASEAEK	2	QAQILASEAEK2	8735.83	6316.58	4635.15
Q5BK07	Q5BK07	CCD43_RAT	Ccdc43	Coiled-coil domain-containing protein 43	1	QAQIVVKPR	QAQIVVKPR	2	QAQIVVKPR2	2393.84	3813.85	2716.39
Q63707	Q63707	PYRD_RAT	Dhodh	Dihydroorotate dehydrogenase (quinone), mitochondrial	1	QAQLTADGLPLGINLGK	QAQLTADGLPLGINLGK	2	QAQLTADGLPLGINLGK2	5780	3028.63	
Q6P756	Q6P756	NECP2_RAT	Necap2	Adaptin ear-binding coat-associated protein 2	1	QAQNPDEGPK	QAQNPDEGPK	2	QAQNPDEGPK2			9144.01
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QAQQERDELADEIANSSGK	QAQQERDELADEIANSSGK	3	QAQQERDELADEIANSSGK3	13953.1	17902.2	14596.3
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QAQQERDELADEIANSSGK	QAQQERDELADEIANSSGK	4	QAQQERDELADEIANSSGK4	5409.77	8637.71	8571.32
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	QAQQVIQK	QAQQVIQK	2	QAQQVIQK2		6484.42	
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	QAQSPAGVSSEVEVLK	QAQSPAGVSSEVEVLK	2	QAQSPAGVSSEVEVLK2	24481.8	21973.5	18693.6
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	QAQVKDNENVINEYSSILEDQK	QAQVKDNENVINEYSSILEDQK	3	QAQVKDNENVINEYSSILEDQK3	8653.47	4922.1	8817.65
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	QAQVPLAAVIKPLAR	QAQVPLAAVIKPLAR	3	QAQVPLAAVIKPLAR3	28040.8	33356.5	18666.6
Q6AYK6	Q6AYK6	CYBP_RAT	Cacybp	Calcyclin-binding protein	1	QAREDTEF	QAREDTEF	2	QAREDTEF2	9846.04	10002.7	9411.7
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	QARPTYATAMLQNLLK	QARPTYATAMLQNLLK	3	QARPTYATAMLQNLLK3	9558.05	18842.2	10827.4
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	QASALIDRPAPHFER	QASALIDRPAPHFER	3	QASALIDRPAPHFER3	68822.3	59083.7	63475
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	QASALIDRPAPHFER	QASALIDRPAPHFER	4	QASALIDRPAPHFER4	163373	175105	178569
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	QASEENADVENVMR	QASEENADVENVMR	2	QASEENADVENVMR2	5426.03	6825.79	
F1LUI2	Q498M9;A0A0G2K7M1;F1M269;F1LUI2;D3ZEN2;A0A0G2JWC0;M0R7H7;D3ZGY4;A0A8I5ZWK4;F1M2N4;A0A8I6AKY4;F1M4G6	F1LUI2_RAT	AABR07013086.1	Glyceraldehyde 3-phosphate dehydrogenase catalytic domain-containing protein	0	QASEGPLK	QASEGPLK	2	QASEGPLK2	32644.4	20042.9	18152.4
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	QASGGVCEGPPR	QASGGVC(UniMod:4)EGPPR	2	QASGGVC(UniMod:4)EGPPR2	181280	216680	231591
Q6P7D4	Q6P7D4	CP20A_RAT	Cyp20a1	Cytochrome P450 20A1	1	QASGIPGLTPTEEK	QASGIPGLTPTEEK	2	QASGIPGLTPTEEK2	7333.38		10400.6
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	QASILQYLR	QASILQYLR	2	QASILQYLR2	1.77226e+07	1.80397e+07	1.75994e+07
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	QASILQYLRVPLVDR	QASILQYLRVPLVDR	3	QASILQYLRVPLVDR3	54519.7	15853	38408.7
D3ZUL5	D3ZUL5	D3ZUL5_RAT	Myct1	Myc target 1	1	QASLELANSFPR	QASLELANSFPR	2	QASLELANSFPR2	193076	212091	224206
D3ZUL5	D3ZUL5	D3ZUL5_RAT	Myct1	Myc target 1	1	QASLELANSFPR	QASLELANSFPR	3	QASLELANSFPR3	5243.21	5143.51	4486.68
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	QASLETTEK	QASLETTEK	2	QASLETTEK2	16440.2	16771.2	17769.7
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	QASLTLSLDLGGR	QASLTLSLDLGGR	2	QASLTLSLDLGGR2	374993	387180	323229
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	QASPGEQEDVTVMDTK	QASPGEQEDVTVMDTK	2	QASPGEQEDVTVMDTK2	6468.54	5308.84	6470.72
B0BNK1	B0BNK1	B0BNK1_RAT	Rab5c	RAB5C, member RAS oncogene family	1	QASPNIVIALAGNK	QASPNIVIALAGNK	2	QASPNIVIALAGNK2	89909.7	71664.2	76831.6
B0BNK1	B0BNK1	B0BNK1_RAT	Rab5c	RAB5C, member RAS oncogene family	1	QASPNIVIALAGNK	QASPNIVIALAGNK	3	QASPNIVIALAGNK3	3405.53	1704.28	4874.65
M0RC99	M0RC99	RAB5A_RAT	Rab5a	Ras-related protein Rab-5A	1	QASPNIVIALSGNK	QASPNIVIALSGNK	2	QASPNIVIALSGNK2	33624.6	20303.8	32953.4
A1L1J8	A1L1J8	A1L1J8_RAT	Rab5b	RAB5B, member RAS oncogene family	1	QASPSIVIALAGNK	QASPSIVIALAGNK	2	QASPSIVIALAGNK2	44201.1	32754.7	37265.7
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	QASQHAPATEP	QASQHAPATEP	2	QASQHAPATEP2	63534	78024.5	
A0A8I6A5J1	A0A8I6A5J1	A0A8I6A5J1_RAT	Nars2	asparagine--tRNA ligase	1	QASQNFTFTPK	QASQNFTFTPK	2	QASQNFTFTPK2			3543.06
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	QASSGTIVLSPAMQAFISLPR	QASSGTIVLSPAMQAFISLPR	3	QASSGTIVLSPAMQAFISLPR3		3594.02	
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	QASSSSAESHQASLPSTESDQAR	QASSSSAESHQASLPSTESDQAR	3	QASSSSAESHQASLPSTESDQAR3	7150.87	4034.6	3331.29
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	QASVQLWR	QASVQLWR	2	QASVQLWR2	21992.8	17121.5	18037.1
Q6DGF9	Q6DGF9	ACBD4_RAT	Acbd4	Acyl-CoA-binding domain-containing protein 4	1	QATAGPCLVPR	QATAGPC(UniMod:4)LVPR	2	QATAGPC(UniMod:4)LVPR2	5276.8	2826.22	
Q5XIC0	Q5XIC0	ECI2_RAT	Eci2	Enoyl-CoA delta isomerase 2	1	QATEGPCTMPK	QATEGPC(UniMod:4)TMPK	2	QATEGPC(UniMod:4)TMPK2	11745.7	8662.15	6511.22
Q5XIC0	Q5XIC0	ECI2_RAT	Eci2	Enoyl-CoA delta isomerase 2	1	QATEGPCTMPKPGVFDFVNK	QATEGPC(UniMod:4)TMPKPGVFDFVNK	3	QATEGPC(UniMod:4)TMPKPGVFDFVNK3	5231.88	12681	15140.9
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	QATELALLQR	QATELALLQR	2	QATELALLQR2	73928.3	85091.5	79854.5
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	QATELALLQR	QATELALLQR	3	QATELALLQR3	3937.29	7579.73	6445.51
Q68FR6	A0A8I6AKG3;A0A8I5Y6C6;Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	0	QATENAKEEVK	QATENAKEEVK	2	QATENAKEEVK2			7020.43
Q68FR6	A0A8I6AKG3;A0A8I5Y6C6;Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	0	QATENAKEEVKR	QATENAKEEVKR	2	QATENAKEEVKR2			14215.7
Q68FR6	A0A8I6AKG3;A0A8I5Y6C6;Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	0	QATENAKEEVKR	QATENAKEEVKR	3	QATENAKEEVKR3			12721.3
A0A8I5ZZG2	A0A8I5ZZG2	A0A8I5ZZG2_RAT	Reep3	Receptor expression-enhancing protein	1	QATESPAYGIPLK	QATESPAYGIPLK	2	QATESPAYGIPLK2	18072.6	26550.6	29006.4
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	QATLGAGLPIATPCTTVNK	QATLGAGLPIATPC(UniMod:4)TTVNK	2	QATLGAGLPIATPC(UniMod:4)TTVNK2	289807	279911	297668
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	QATLGAGLPIATPCTTVNK	QATLGAGLPIATPC(UniMod:4)TTVNK	3	QATLGAGLPIATPC(UniMod:4)TTVNK3	56405.8	70286.6	62822.5
Q5FVN0	Q5FVN0	MBOA5_RAT	Lpcat3	Lysophospholipid acyltransferase 5	1	QATNLIR	QATNLIR	2	QATNLIR2	17571.8	21653.5	20702.4
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	QATPPTR	QATPPTR	2	QATPPTR2			106377
A0A8I6APP3	A0A8I6APP3	A0A8I6APP3_RAT	Plekho2	Pleckstrin homology domain containing O2	1	QATQVLQEMR	QATQVLQEMR	2	QATQVLQEMR2	81669.9	107585	113307
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	QATTATGCPLLIR	QATTATGC(UniMod:4)PLLIR	2	QATTATGC(UniMod:4)PLLIR2	53351.4	75427.5	57504.7
P28042	P28042	SSBP_RAT	Ssbp1	Single-stranded DNA-binding protein, mitochondrial	1	QATTIIADNIIFLSDQAR	QATTIIADNIIFLSDQAR	3	QATTIIADNIIFLSDQAR3	3867.64	2364.46	7028.78
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	QATYGYYLGNPAEFQDSSDHHTFK	QATYGYYLGNPAEFQDSSDHHTFK	4	QATYGYYLGNPAEFQDSSDHHTFK4	15805.6	19550	22264.4
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	QATYGYYLGNPAEFQDSSDHHTFKK	QATYGYYLGNPAEFQDSSDHHTFKK	4	QATYGYYLGNPAEFQDSSDHHTFKK4	7629.35	12267.8	5590.58
P97700	P97700	M2OM_RAT	Slc25a11	Mitochondrial 2-oxoglutarate/malate carrier protein	1	QATYTTTR	QATYTTTR	2	QATYTTTR2	33803.3		34268.9
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	QAVAALCALGGFK	QAVAALC(UniMod:4)ALGGFK	2	QAVAALC(UniMod:4)ALGGFK2	4441.27		5140.13
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	QAVAQILPFR	QAVAQILPFR	2	QAVAQILPFR2	28173.8	14381.4	17163.8
P53534	P53534	PYGB_RAT	Pygb	Glycogen phosphorylase, brain form (Fragment)	1	QAVDQISSGFFSPK	QAVDQISSGFFSPK	2	QAVDQISSGFFSPK2		5881.57	6936.97
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	QAVDTTVNGVSIR	QAVDTTVNGVSIR	2	QAVDTTVNGVSIR2	1798.9	2906.27	1679.58
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	QAVDTTVNGVSIR	QAVDTTVNGVSIR	3	QAVDTTVNGVSIR3	276764	330215	379804
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	QAVDTTVNGVSIRSLK	QAVDTTVNGVSIRSLK	3	QAVDTTVNGVSIRSLK3	1321.04	2860.38	4077.12
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	QAVDTTVNGVSIRSLKVNCK	QAVDTTVNGVSIRSLKVNC(UniMod:4)K	4	QAVDTTVNGVSIRSLKVNC(UniMod:4)K4		3627.87	5115
P24050	P24050	RS5_RAT	Rps5	Small ribosomal subunit protein uS7	1	QAVDVSPLR	QAVDVSPLR	2	QAVDVSPLR2	19531.1	21311	15488
P24050	P24050	RS5_RAT	Rps5	Small ribosomal subunit protein uS7	1	QAVDVSPLRR	QAVDVSPLRR	3	QAVDVSPLRR3	18057.2	18357.8	19145.4
A0A8J8YFS5	A0A8I6ALV4;A0A8J8YFS5	A0A8J8YFS5_RAT	Hars1	Histidine--tRNA ligase, cytoplasmic	0	QAVEGLGDLK	QAVEGLGDLK	2	QAVEGLGDLK2	21592.4		
A0A0G2K350	A0A0G2K350	A0A0G2K350_RAT	Napg	NSF attachment protein gamma	1	QAVELLGK	QAVELLGK	2	QAVELLGK2	53036.9	76557.7	52874.6
F1LTR1	F1LTR1	WDR26_RAT	Wdr26	WD repeat-containing protein 26	1	QAVELQR	QAVELQR	2	QAVELQR2			48459.3
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	QAVEQQIQSHR	QAVEQQIQSHR	2	QAVEQQIQSHR2	5510.05	7103.76	4140.94
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	QAVEQQIQSHR	QAVEQQIQSHR	3	QAVEQQIQSHR3	80420.7	75123	87818.2
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	QAVIGNLDEEQYK	QAVIGNLDEEQYK	2	QAVIGNLDEEQYK2	134079	119869	129447
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	QAVLFSPAHSPGAEEAKPPPASITTK	QAVLFSPAHSPGAEEAKPPPASITTK	4	QAVLFSPAHSPGAEEAKPPPASITTK4	8236.88	7499.46	12531.4
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	QAVLLPTPSLHWR	QAVLLPTPSLHWR	2	QAVLLPTPSLHWR2	18081.7		16758.5
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	QAVLLPTPSLHWR	QAVLLPTPSLHWR	3	QAVLLPTPSLHWR3	128924	135535	144339
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	QAVLQVNQSFVSVTAQK	QAVLQVNQSFVSVTAQK	2	QAVLQVNQSFVSVTAQK2	2973.8		
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	QAVLTLEMER	QAVLTLEMER	2	QAVLTLEMER2	9862.81	10744.2	8357.1
Q8K4V4	Q8K4V4	SNX27_RAT	Snx27	Sorting nexin-27	1	QAVPISVPTYK	QAVPISVPTYK	2	QAVPISVPTYK2	33853	31104.1	35126.9
D3ZZL3	D3ZZL3	D3ZZL3_RAT	Naglu	N-acetyl-alpha-glucosaminidase	1	QAVQELVSSCYEEAR	QAVQELVSSC(UniMod:4)YEEAR	2	QAVQELVSSC(UniMod:4)YEEAR2	5115.48	5423.11	4974.15
D3ZZL3	D3ZZL3	D3ZZL3_RAT	Naglu	N-acetyl-alpha-glucosaminidase	1	QAVQELVSSCYEEAR	QAVQELVSSC(UniMod:4)YEEAR	3	QAVQELVSSC(UniMod:4)YEEAR3	2178.6	3275.36	2501.51
O35964	O35964	SH3G1_RAT	Sh3gl1	Endophilin-A2	1	QAVQILEELADK	QAVQILEELADK	2	QAVQILEELADK2	54858.2	44852.7	42604.1
O35964	O35964	SH3G1_RAT	Sh3gl1	Endophilin-A2	1	QAVQILEELADKLK	QAVQILEELADKLK	3	QAVQILEELADKLK3	20516.6	19851.2	32933.9
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	QAVSVDEMR	QAVSVDEMR	2	QAVSVDEMR2	27296.4	18938.5	24498
Q68FQ7	Q68FQ7	RPAP3_RAT	Rpap3	RNA polymerase II-associated protein 3	1	QAVTELSR	QAVTELSR	2	QAVTELSR2	4618.37	6235.37	4061.71
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	QAVTNLK	QAVTNLK	2	QAVTNLK2	10900.3		19864.8
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	QAVTNPNNTFYATK	QAVTNPNNTFYATK	2	QAVTNPNNTFYATK2	81367.1	70368.8	80774.9
B2RYN0	B2RYN0	B2RYN0_RAT	Pgm3	Phosphoacetylglucosamine mutase	1	QAVTPPGLQEAINDLVK	QAVTPPGLQEAINDLVK	2	QAVTPPGLQEAINDLVK2	16359.9	6554.92	14097.1
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	QAVVAQWQR	QAVVAQWQR	2	QAVVAQWQR2	9018.5	17792.4	16398.7
F7FF81	F7FF81	F7FF81_RAT	Pfdn5	Prefoldin subunit 5	1	QAVVEMMSQK	QAVVEMMSQK	2	QAVVEMMSQK2	89380.3	102565	88391.7
Q5RJP7	Q5RJP7	PGFRL_RAT	Pdgfrl	Platelet-derived growth factor receptor-like protein	1	QAVVPCR	QAVVPC(UniMod:4)R	2	QAVVPC(UniMod:4)R2	11323.9	16854.8	14369.6
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	QAWATDDVAQIYDK	QAWATDDVAQIYDK	2	QAWATDDVAQIYDK2			2796.57
O08773	O08773	RGS14_RAT	Rgs14	Regulator of G-protein signaling 14	1	QAWLSEEVLAQPRPDMFR	QAWLSEEVLAQPRPDMFR	3	QAWLSEEVLAQPRPDMFR3	35165.1	23826.2	17514.2
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	QAWTTMEK	QAWTTMEK	2	QAWTTMEK2	11338.6		9395.24
A0A8I6A371	A0A8I6A371	A0A8I6A371_RAT	Nmi	N-myc (and STAT) interactor	1	QAYEECSPEK	QAYEEC(UniMod:4)SPEK	2	QAYEEC(UniMod:4)SPEK2	4190.71	2630.05	8622.44
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	QAYESNLISHGLQLEATR	QAYESNLISHGLQLEATR	3	QAYESNLISHGLQLEATR3	107028	125522	125256
Q91ZW1	Q91ZW1	TFAM_RAT	Tfam	Transcription factor A, mitochondrial	1	QAYIQLAK	QAYIQLAK	2	QAYIQLAK2	6052.32	9959.23	7438.48
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	QAYTANNSSQVQAAMK	QAYTANNSSQVQAAMK	2	QAYTANNSSQVQAAMK2	8520.87	2355.54	5079.56
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	QAYTANNSSQVQAAMK	QAYTANNSSQVQAAMK	3	QAYTANNSSQVQAAMK3	14556.5	7647.6	9390.9
A0A8I6AGD6	A0A8I6AGD6	A0A8I6AGD6_RAT	Elapor2	Endosome-lysosome associated apoptosis and autophagy regulator family member 2	1	QAYTHVIFKNATFTFTWAFQR	QAYTHVIFKNATFTFTWAFQR	3	QAYTHVIFKNATFTFTWAFQR3	7047.67		6089.26
P21670	P21670	PSA4_RAT	Psma4	Proteasome subunit alpha type-4	1	QAYTQFGGK	QAYTQFGGK	2	QAYTQFGGK2	839149	786338	877410
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	QCADLPEEDEELR	QC(UniMod:4)ADLPEEDEELR	2	QC(UniMod:4)ADLPEEDEELR2	5476.16	4062.77	5245.09
Q9JJH5	Q9JJH5	F262_RAT	Pfkfb2	6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2	1	QCALVALEDVK	QC(UniMod:4)ALVALEDVK	2	QC(UniMod:4)ALVALEDVK2	1865.94	729.709	
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	QCAQWLIHCK	QC(UniMod:4)AQWLIHC(UniMod:4)K	3	QC(UniMod:4)AQWLIHC(UniMod:4)K3	23486.2	22408.9	7281.61
P82450	P82450	SIAE_RAT	Siae	Sialate O-acetylesterase	1	QCAVYHTSSVLPAPPFTAR	QC(UniMod:4)AVYHTSSVLPAPPFTAR	3	QC(UniMod:4)AVYHTSSVLPAPPFTAR3	26706.8	22939.4	23479.1
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	QCCDCCGLGLR	QC(UniMod:4)C(UniMod:4)DC(UniMod:4)C(UniMod:4)GLGLR	2	QC(UniMod:4)C(UniMod:4)DC(UniMod:4)C(UniMod:4)GLGLR2	336323	362633	310308
D4A1A5	A0A8I6A6K6;D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	0	QCCVLFDFVSDPLSDLK	QC(UniMod:4)C(UniMod:4)VLFDFVSDPLSDLK	3	QC(UniMod:4)C(UniMod:4)VLFDFVSDPLSDLK3		3853.9	3754.69
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	QCDDLPK	QC(UniMod:4)DDLPK	2	QC(UniMod:4)DDLPK2	24852.4	32065.5	27675.6
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	QCDFPAVENGR	QC(UniMod:4)DFPAVENGR	2	QC(UniMod:4)DFPAVENGR2	36599.3	36471.2	36248.6
Q6P4Z6	Q6P4Z6	LCMT1_RAT	Lcmt1	Leucine carboxyl methyltransferase 1	1	QCDLAGVETCK	QC(UniMod:4)DLAGVETC(UniMod:4)K	2	QC(UniMod:4)DLAGVETC(UniMod:4)K2		3626.04	526.12
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	QCDLEIMEIK	QC(UniMod:4)DLEIMEIK	2	QC(UniMod:4)DLEIMEIK2	6295.19	7436.51	3464.94
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	QCEALQCWR	QC(UniMod:4)EALQC(UniMod:4)WR	2	QC(UniMod:4)EALQC(UniMod:4)WR2	39470.6	36980.9	38245.6
P01026	P01026	CO3_RAT	C3	Complement C3	1	QCEDLGAFTETMVVFGCPN	QC(UniMod:4)EDLGAFTETMVVFGC(UniMod:4)PN	3	QC(UniMod:4)EDLGAFTETMVVFGC(UniMod:4)PN3	7617.18	3964.03	
A0A8I6ARU6	A0A8I6ARU6	A0A8I6ARU6_RAT	Galk1	Galactokinase 1	1	QCEEVAQALGK	QC(UniMod:4)EEVAQALGK	2	QC(UniMod:4)EEVAQALGK2	9060.63	6747.97	4913.76
Q4FZT2	Q4FZT2	PPME1_RAT	Ppme1	Protein phosphatase methylesterase 1	1	QCEGITSPESSK	QC(UniMod:4)EGITSPESSK	2	QC(UniMod:4)EGITSPESSK2	9827.99	7964.52	9415.1
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	QCETPLDPQNGIVHVNTDIR	QC(UniMod:4)ETPLDPQNGIVHVNTDIR	3	QC(UniMod:4)ETPLDPQNGIVHVNTDIR3	110921	110653	121601
Q6AY25	Q6AY25	TMED3_RAT	Tmed3	Transmembrane emp24 domain-containing protein 3	1	QCFHEEVEQGVK	QC(UniMod:4)FHEEVEQGVK	3	QC(UniMod:4)FHEEVEQGVK3	10029.1	10205.1	8868.2
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	QCFLVLR	QC(UniMod:4)FLVLR	2	QC(UniMod:4)FLVLR2	25517	21524.1	26384.8
A0A8I6A9E8	A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	1	QCFQTIMMR	QC(UniMod:4)FQTIMMR	2	QC(UniMod:4)FQTIMMR2	5239.95	9350.46	8043.27
D3ZTX0	D3ZTX0	TMED7_RAT	Tmed7	Transmembrane emp24 domain-containing protein 7	1	QCFYEDITQGTK	QC(UniMod:4)FYEDITQGTK	2	QC(UniMod:4)FYEDITQGTK2	203050	165853	239661
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	QCGDFEQQLANR	QC(UniMod:4)GDFEQQLANR	2	QC(UniMod:4)GDFEQQLANR2	4820.11	4120.46	2472.56
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	QCGHQLSACHQDIYEGLDMR	QC(UniMod:4)GHQLSAC(UniMod:4)HQDIYEGLDMR	3	QC(UniMod:4)GHQLSAC(UniMod:4)HQDIYEGLDMR3	20300	9624.67	13426.5
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	QCGHQLSACHQDIYEGLDMR	QC(UniMod:4)GHQLSAC(UniMod:4)HQDIYEGLDMR	4	QC(UniMod:4)GHQLSAC(UniMod:4)HQDIYEGLDMR4	161705	170003	160827
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	QCGLGGSVGNK	QC(UniMod:4)GLGGSVGNK	2	QC(UniMod:4)GLGGSVGNK2	43749.8	43335.9	46287.5
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	QCGNIFCAECSAK	QC(UniMod:4)GNIFC(UniMod:4)AEC(UniMod:4)SAK	2	QC(UniMod:4)GNIFC(UniMod:4)AEC(UniMod:4)SAK2	3821.22	6125.82	6349.06
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	QCGSQASVK	QC(UniMod:4)GSQASVK	2	QC(UniMod:4)GSQASVK2			6759.19
Q5FVP9	Q5FVP9	Q5FVP9_RAT	LOC100361907	Cfh protein	1	QCIFHYVENGESSYWQR	QC(UniMod:4)IFHYVENGESSYWQR	3	QC(UniMod:4)IFHYVENGESSYWQR3	14087.3	7237.67	7282.02
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	QCIMQANAEYHQSILAK	QC(UniMod:4)IMQANAEYHQSILAK	3	QC(UniMod:4)IMQANAEYHQSILAK3	5636.96	6622.13	7679.98
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	QCIYGNPEGTVLLACEEAQCR	QC(UniMod:4)IYGNPEGTVLLAC(UniMod:4)EEAQC(UniMod:4)R	3	QC(UniMod:4)IYGNPEGTVLLAC(UniMod:4)EEAQC(UniMod:4)R3	1.02137e+06	827460	741848
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	QCLDLLR	QC(UniMod:4)LDLLR	2	QC(UniMod:4)LDLLR2	33118.6	30685.9	24266.6
D3Z952	D3Z952	D3Z952_RAT	Mfap2	Microfibril associated protein 2	1	QCLNEVCFYSLR	QC(UniMod:4)LNEVC(UniMod:4)FYSLR	2	QC(UniMod:4)LNEVC(UniMod:4)FYSLR2	1686.1		5358.23
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	QCLSSELLDACTFHK	QC(UniMod:4)LSSELLDAC(UniMod:4)TFHK	3	QC(UniMod:4)LSSELLDAC(UniMod:4)TFHK3	11219.9	11331.3	6241.65
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	QCLSSELLDACTFHKH	QC(UniMod:4)LSSELLDAC(UniMod:4)TFHKH	3	QC(UniMod:4)LSSELLDAC(UniMod:4)TFHKH3	6530.03	4640.92	3308.68
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	QCLSSELLDACTFHKH	QC(UniMod:4)LSSELLDAC(UniMod:4)TFHKH	4	QC(UniMod:4)LSSELLDAC(UniMod:4)TFHKH4	40648.1	36906.3	49110.9
Q68FW9	Q68FW9	CSN3_RAT	Cops3	COP9 signalosome complex subunit 3	1	QCLSSLYK	QC(UniMod:4)LSSLYK	2	QC(UniMod:4)LSSLYK2	56796	65729.4	47903.1
D3ZHR2	D3ZHR2	ABCD1_RAT	Abcd1	ATP-binding cassette sub-family D member 1	1	QCLTPAR	QC(UniMod:4)LTPAR	2	QC(UniMod:4)LTPAR2	21111.3	9174.13	14453
P51792	P51796;P51792	CLCN3_RAT	Clcn3	H(+)/Cl(-) exchange transporter 3	0	QCLVTHNGR	QC(UniMod:4)LVTHNGR	2	QC(UniMod:4)LVTHNGR2			7815.73
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	QCMHPLSVHLTK	QC(UniMod:4)MHPLSVHLTK	2	QC(UniMod:4)MHPLSVHLTK2	3121.5	4775.57	3126.84
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	QCMHPLSVHLTK	QC(UniMod:4)MHPLSVHLTK	3	QC(UniMod:4)MHPLSVHLTK3	22487.1	33474.9	28824.9
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	QCNNPAPQNGGAPCLGK	QC(UniMod:4)NNPAPQNGGAPC(UniMod:4)LGK	2	QC(UniMod:4)NNPAPQNGGAPC(UniMod:4)LGK2	60206.5	67179.2	44362.8
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	QCNNPAPQNGGAPCLGK	QC(UniMod:4)NNPAPQNGGAPC(UniMod:4)LGK	3	QC(UniMod:4)NNPAPQNGGAPC(UniMod:4)LGK3	25975.5	27659.4	24644.9
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	QCNNPAPQR	QC(UniMod:4)NNPAPQR	2	QC(UniMod:4)NNPAPQR2			122053
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	QCPIMDPAWEAPEGVPIDAIIFGGR	QC(UniMod:4)PIMDPAWEAPEGVPIDAIIFGGR	3	QC(UniMod:4)PIMDPAWEAPEGVPIDAIIFGGR3	15206.3	21012.1	13951.4
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	QCPQQLSACSK	QC(UniMod:4)PQQLSAC(UniMod:4)SK	2	QC(UniMod:4)PQQLSAC(UniMod:4)SK2	28540.2	17003.3	12004.3
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	QCQEEVASLQAILK	QC(UniMod:4)QEEVASLQAILK	2	QC(UniMod:4)QEEVASLQAILK2	5962.13	9794.91	12255.4
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	QCQEEVASLQAILK	QC(UniMod:4)QEEVASLQAILK	3	QC(UniMod:4)QEEVASLQAILK3	5818.67	6486.11	6211.88
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	QCQEGAYLR	QC(UniMod:4)QEGAYLR	2	QC(UniMod:4)QEGAYLR2	5588.43	8130.45	
Q56AP7	Q56AP7	CRBN_RAT	Crbn	Protein cereblon	1	QCQETEITTK	QC(UniMod:4)QETEITTK	2	QC(UniMod:4)QETEITTK2	8557.96	6583.1	4331.4
Q80YN4	Q80YN4	CORIN_RAT	Corin	Atrial natriuretic peptide-converting enzyme	1	QCQILPYHSTLAPLLPIVK	QC(UniMod:4)QILPYHSTLAPLLPIVK	3	QC(UniMod:4)QILPYHSTLAPLLPIVK3	694.955	3305.42	1747.66
D3ZSZ6	F1M5T2;D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	0	QCQLGVLPLGTGNDLAR	QC(UniMod:4)QLGVLPLGTGNDLAR	2	QC(UniMod:4)QLGVLPLGTGNDLAR2			61848.4
D3ZSZ6	F1M5T2;D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	0	QCQLGVLPLGTGNDLAR	QC(UniMod:4)QLGVLPLGTGNDLAR	3	QC(UniMod:4)QLGVLPLGTGNDLAR3	55287.5	58226.3	51764.4
Q68EJ0	Q68EJ0	NB5R4_RAT	Cyb5r4	Cytochrome b5 reductase 4	1	QCQLISK	QC(UniMod:4)QLISK	2	QC(UniMod:4)QLISK2	7901.11	4528.81	
Q5HZW5	Q5HZW5	CD320_RAT	Cd320	CD320 antigen	1	QCQPQPALPCSCDNISGCSAGSDK	QC(UniMod:4)QPQPALPC(UniMod:4)SC(UniMod:4)DNISGC(UniMod:4)SAGSDK	3	QC(UniMod:4)QPQPALPC(UniMod:4)SC(UniMod:4)DNISGC(UniMod:4)SAGSDK3	9228.32	13889.5	16120.1
D3ZN06	D3ZN06	D3ZN06_RAT	Cd248	CD248 molecule	1	QCQPQRPLR	QC(UniMod:4)QPQRPLR	2	QC(UniMod:4)QPQRPLR2	22212.3		15107.9
D3ZN06	D3ZN06	D3ZN06_RAT	Cd248	CD248 molecule	1	QCQPQRPLR	QC(UniMod:4)QPQRPLR	3	QC(UniMod:4)QPQRPLR3	1.551e+06		1.56615e+06
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	QCSDCPFFQECQK	QC(UniMod:4)SDC(UniMod:4)PFFQEC(UniMod:4)QK	2	QC(UniMod:4)SDC(UniMod:4)PFFQEC(UniMod:4)QK2	5310.99	9384.44	3573.03
P53610	P53610	PGTB1_RAT	Pggt1b	Geranylgeranyl transferase type-1 subunit beta	1	QCSDNVHISS	QC(UniMod:4)SDNVHISS	2	QC(UniMod:4)SDNVHISS2	1732.88		1214.62
Q08851	Q08851	STX5_RAT	Stx5	Syntaxin-5	1	QCSEFTLMAR	QC(UniMod:4)SEFTLMAR	2	QC(UniMod:4)SEFTLMAR2	12074.7	9775.77	13311.7
Q5U2Z4	Q5U2Z4	Q5U2Z4_RAT	Nfkb2	Nuclear factor kappa B subunit 2	1	QCSELGVCAVSVGPK	QC(UniMod:4)SELGVC(UniMod:4)AVSVGPK	2	QC(UniMod:4)SELGVC(UniMod:4)AVSVGPK2	4407.77		
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	QCSFSDYLK	QC(UniMod:4)SFSDYLK	2	QC(UniMod:4)SFSDYLK2	10768.3	12025.6	7499.09
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	QCSGFCENFGTCQMAADGSR	QC(UniMod:4)SGFC(UniMod:4)ENFGTC(UniMod:4)QMAADGSR	3	QC(UniMod:4)SGFC(UniMod:4)ENFGTC(UniMod:4)QMAADGSR3	7874.64	3359.17	12267.6
P27590	P27590	UROM_RAT	Umod	Uromodulin	1	QCSGFSER	QC(UniMod:4)SGFSER	2	QC(UniMod:4)SGFSER2	5894.61	12076.3	5310.49
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	QCSKEDGGGWWYNR	QC(UniMod:4)SKEDGGGWWYNR	3	QC(UniMod:4)SKEDGGGWWYNR3	15589.4	16092.5	19534.8
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	QCSPSQGPCCTAQCAFK	QC(UniMod:4)SPSQGPC(UniMod:4)C(UniMod:4)TAQC(UniMod:4)AFK	3	QC(UniMod:4)SPSQGPC(UniMod:4)C(UniMod:4)TAQC(UniMod:4)AFK3	12007.1	26459.8	40415.8
P21775	P07871;P21775	THIKA_RAT	Acaa1a	3-ketoacyl-CoA thiolase A, peroxisomal	0	QCSSGLQAVANIAGGIR	QC(UniMod:4)SSGLQAVANIAGGIR	2	QC(UniMod:4)SSGLQAVANIAGGIR2	10129	12823.1	8853.21
P21775	P07871;P21775	THIKA_RAT	Acaa1a	3-ketoacyl-CoA thiolase A, peroxisomal	0	QCSSGLQAVANIAGGIR	QC(UniMod:4)SSGLQAVANIAGGIR	3	QC(UniMod:4)SSGLQAVANIAGGIR3	4454.76		5862.39
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	QCSSSSWSR	QC(UniMod:4)SSSSWSR	2	QC(UniMod:4)SSSSWSR2	34870.5	41545.6	45869
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	QCSSTLHSGAYR	QC(UniMod:4)SSTLHSGAYR	3	QC(UniMod:4)SSTLHSGAYR3	7197.55	5810.74	
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	QCSSTLVPGSYSSGPEEGTFVCAER	QC(UniMod:4)SSTLVPGSYSSGPEEGTFVC(UniMod:4)AER	3	QC(UniMod:4)SSTLVPGSYSSGPEEGTFVC(UniMod:4)AER3	6139.43	7780.96	6991.07
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	QCTHWLIQCR	QC(UniMod:4)THWLIQC(UniMod:4)R	3	QC(UniMod:4)THWLIQC(UniMod:4)R3	8736.39	5536.76	6051.91
P08650	P08650	CO5_RAT	C5	Complement C5	1	QCTMIYSTSDTNLQR	QC(UniMod:4)TMIYSTSDTNLQR	2	QC(UniMod:4)TMIYSTSDTNLQR2	258297	208695	199746
P08650	P08650	CO5_RAT	C5	Complement C5	1	QCTMIYSTSDTNLQR	QC(UniMod:4)TMIYSTSDTNLQR	3	QC(UniMod:4)TMIYSTSDTNLQR3	61166.6	49185	53801.7
Q561S0	A0A1W2Q6F8;Q561S0	NDUAA_RAT	Ndufa10	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial	0	QCVDHYNEIK	QC(UniMod:4)VDHYNEIK	2	QC(UniMod:4)VDHYNEIK2	1462.89		2252.8
Q561S0	A0A1W2Q6F8;Q561S0	NDUAA_RAT	Ndufa10	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial	0	QCVDHYNEIK	QC(UniMod:4)VDHYNEIK	3	QC(UniMod:4)VDHYNEIK3	14566.6	30674.3	30095.2
Q561S0	A0A1W2Q6F8;Q561S0	NDUAA_RAT	Ndufa10	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial	0	QCVDHYNEIKR	QC(UniMod:4)VDHYNEIKR	3	QC(UniMod:4)VDHYNEIKR3	5126.18		2281.03
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	QCVEEIER	QC(UniMod:4)VEEIER	2	QC(UniMod:4)VEEIER2	10090.8	8874.98	6343.62
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	QCVEEIERR	QC(UniMod:4)VEEIERR	3	QC(UniMod:4)VEEIERR3	14625.2	13985.9	23444.7
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	QCVENADLPEGEK	QC(UniMod:4)VENADLPEGEK	2	QC(UniMod:4)VENADLPEGEK2	36919.6	37510.4	33217
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	QCVENADLPEGEKKPIDQR	QC(UniMod:4)VENADLPEGEKKPIDQR	3	QC(UniMod:4)VENADLPEGEKKPIDQR3	13048.2	4616.68	17092.4
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	QCVENADLPEGEKKPIDQR	QC(UniMod:4)VENADLPEGEKKPIDQR	4	QC(UniMod:4)VENADLPEGEKKPIDQR4	158371	200377	189292
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	QCVFHYVENGESSYWQR	QC(UniMod:4)VFHYVENGESSYWQR	3	QC(UniMod:4)VFHYVENGESSYWQR3	28379.5	25153.7	13710.3
A0A0G2K9S8	A0A0G2K9S8	A0A0G2K9S8_RAT	Mfap5	Microfibril associated protein 5	1	QCVHQACFTSLR	QC(UniMod:4)VHQAC(UniMod:4)FTSLR	2	QC(UniMod:4)VHQAC(UniMod:4)FTSLR2	2677.96	3650.27	3132.33
A0A0G2K9S8	A0A0G2K9S8	A0A0G2K9S8_RAT	Mfap5	Microfibril associated protein 5	1	QCVHQACFTSLR	QC(UniMod:4)VHQAC(UniMod:4)FTSLR	3	QC(UniMod:4)VHQAC(UniMod:4)FTSLR3	60305.5	76425.4	63608.7
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	QCVHQIPSVTMEASIQPITR	QC(UniMod:4)VHQIPSVTMEASIQPITR	3	QC(UniMod:4)VHQIPSVTMEASIQPITR3	10324.5	10304	5941.4
Q5BJU0	Q5BJU0	Q5BJU0_RAT	Rras2	RAS related 2	1	QCVIDDR	QC(UniMod:4)VIDDR	2	QC(UniMod:4)VIDDR2	38040.7	30693.4	27348.3
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	QCVINVPSLCGMDHTEK	QC(UniMod:4)VINVPSLC(UniMod:4)GMDHTEK	3	QC(UniMod:4)VINVPSLC(UniMod:4)GMDHTEK3	363704	372634	429515
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	QCVINVPSLCGMDHTEKR	QC(UniMod:4)VINVPSLC(UniMod:4)GMDHTEKR	4	QC(UniMod:4)VINVPSLC(UniMod:4)GMDHTEKR4	36109.9	48528.8	40572.2
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	QCVYDMCAHK	QC(UniMod:4)VYDMC(UniMod:4)AHK	2	QC(UniMod:4)VYDMC(UniMod:4)AHK2	18010.2	8041.66	1623.73
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	QCVYDMCAHK	QC(UniMod:4)VYDMC(UniMod:4)AHK	3	QC(UniMod:4)VYDMC(UniMod:4)AHK3	172896	107350	149503
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	QCVYDMCAHKGDK	QC(UniMod:4)VYDMC(UniMod:4)AHKGDK	3	QC(UniMod:4)VYDMC(UniMod:4)AHKGDK3	19592.6	16670.9	17608.7
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	QCVYDMCAHKGDK	QC(UniMod:4)VYDMC(UniMod:4)AHKGDK	4	QC(UniMod:4)VYDMC(UniMod:4)AHKGDK4	17199.4	24660.9	25201.7
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	QCWLVNTLAK	QC(UniMod:4)WLVNTLAK	2	QC(UniMod:4)WLVNTLAK2	5363.28	9957.21	8334.26
D3ZK93	D3ZK93	GSG1L_RAT	Gsg1l	Germ cell-specific gene 1-like protein	1	QCWVLGHWV	QC(UniMod:4)WVLGHWV	2	QC(UniMod:4)WVLGHWV2			3309.87
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	QDADGQMK	QDADGQMK	2	QDADGQMK2			63628.2
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	QDADSVITVR	QDADSVITVR	2	QDADSVITVR2	11731.9	17632.8	15167.3
P21775	P07871;P21775	THIKA_RAT	Acaa1a	3-ketoacyl-CoA thiolase A, peroxisomal	0	QDAFALASQQK	QDAFALASQQK	2	QDAFALASQQK2	34266.9	23994.9	29867.9
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	QDAFANFANFSK	QDAFANFANFSK	2	QDAFANFANFSK2	17411.6	26209.6	18083.7
G3V965	G3V965	G3V965_RAT	Agpat5	1-acylglycerol-3-phosphate O-acyltransferase 5	1	QDALGHVR	QDALGHVR	2	QDALGHVR2	7357.13	4809.92	7470.52
Q5FVJ0	Q5FVJ0	RUFY3_RAT	Rufy3	Protein RUFY3	1	QDALVSLR	QDALVSLR	2	QDALVSLR2	9786.06	14229.4	8505.96
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	QDANCVQPADPLNK	QDANC(UniMod:4)VQPADPLNK	2	QDANC(UniMod:4)VQPADPLNK2	85395.9	82019.8	92278.3
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	QDANCVQPADPLNK	QDANC(UniMod:4)VQPADPLNK	3	QDANC(UniMod:4)VQPADPLNK3	9068.34	8180.7	8027.29
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	QDAPGPTSPTSPTAVTSSLSAEWNK	QDAPGPTSPTSPTAVTSSLSAEWNK	3	QDAPGPTSPTSPTAVTSSLSAEWNK3	6500.04	5587.43	3057.06
Q60GF7	Q60GF7	PIGX_RAT	Pigx	Phosphatidylinositol-glycan biosynthesis class X protein	1	QDAQCIDCFQAFLPVHYR	QDAQC(UniMod:4)IDC(UniMod:4)FQAFLPVHYR	3	QDAQC(UniMod:4)IDC(UniMod:4)FQAFLPVHYR3	13546	21080.4	18555.4
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	QDAQDRLDEMDQQK	QDAQDRLDEMDQQK	3	QDAQDRLDEMDQQK3	3859.13	653.429	4148.46
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	QDAQLQQK	QDAQLQQK	2	QDAQLQQK2			7769.37
P16391	P16391	HA12_RAT		RT1 class I histocompatibility antigen, AA alpha chain	1	QDAYDGR	QDAYDGR	2	QDAYDGR2	46255.5		78717.7
P16391	P16391	HA12_RAT		RT1 class I histocompatibility antigen, AA alpha chain	1	QDAYDGRDYIALNEDLK	QDAYDGRDYIALNEDLK	3	QDAYDGRDYIALNEDLK3	128118	143992	132617
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	QDCPIDGCLSNPCFAGAK	QDC(UniMod:4)PIDGC(UniMod:4)LSNPC(UniMod:4)FAGAK	3	QDC(UniMod:4)PIDGC(UniMod:4)LSNPC(UniMod:4)FAGAK3	3.11613e+06	3.36664e+06	3.476e+06
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	QDCSQLVER	QDC(UniMod:4)SQLVER	2	QDC(UniMod:4)SQLVER2	15299	14268	9512.8
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	QDDADQDMMMAGMASQAAQEAELNAR	QDDADQDMMMAGMASQAAQEAELNAR	3	QDDADQDMMMAGMASQAAQEAELNAR3	13374.4	19021.8	12045.9
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	QDDGGSPIR	QDDGGSPIR	2	QDDGGSPIR2	989799	997812	1.10378e+06
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	QDDIIQEK	QDDIIQEK	2	QDDIIQEK2	23293.5	14085.8	20239.2
Q32PX2	Q32PX2	AIMP2_RAT	Aimp2	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2	1	QDDILKR	QDDILKR	2	QDDILKR2	1366.71		1724.6
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	QDDRPPLTSLLSK	QDDRPPLTSLLSK	3	QDDRPPLTSLLSK3	41005.8	29892.8	26078.9
Q63344	Q63344	MOT2_RAT	Slc16a7	Monocarboxylate transporter 2	1	QDDVTVK	QDDVTVK	2	QDDVTVK2		29273.9	
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	QDDVVQLELPVTEAQQLLSACVEK	QDDVVQLELPVTEAQQLLSAC(UniMod:4)VEK	3	QDDVVQLELPVTEAQQLLSAC(UniMod:4)VEK3	5378.88		
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	QDEAEGDPGNRQEFHEPGHQEGDPEAEADR	QDEAEGDPGNRQEFHEPGHQEGDPEAEADR	4	QDEAEGDPGNRQEFHEPGHQEGDPEAEADR4	2008.93	2314.16	447.075
P24594	P24594	IBP5_RAT	Igfbp5	Insulin-like growth factor-binding protein 5	1	QDEEKPLHALLHGR	QDEEKPLHALLHGR	3	QDEEKPLHALLHGR3	11046.5	13192.5	5117.27
P24594	P24594	IBP5_RAT	Igfbp5	Insulin-like growth factor-binding protein 5	1	QDEEKPLHALLHGR	QDEEKPLHALLHGR	4	QDEEKPLHALLHGR4	25868.3	84444.1	41270.2
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	QDEGVLK	QDEGVLK	2	QDEGVLK2	7269.04	6048.35	6676.14
P25236	P25236	SEPP1_RAT	Selenop	Selenoprotein P	1	QDEHQTDVWTLLNGNK	QDEHQTDVWTLLNGNK	2	QDEHQTDVWTLLNGNK2	16380.8	13660.3	14629.6
P25236	P25236	SEPP1_RAT	Selenop	Selenoprotein P	1	QDEHQTDVWTLLNGNK	QDEHQTDVWTLLNGNK	3	QDEHQTDVWTLLNGNK3	185975	173376	196035
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	QDENDDDDDWNPCK	QDENDDDDDWNPC(UniMod:4)K	2	QDENDDDDDWNPC(UniMod:4)K2	70839.7	83720	83848.3
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	QDEPVIVKPMPGRPNTQNPPR	QDEPVIVKPMPGRPNTQNPPR	4	QDEPVIVKPMPGRPNTQNPPR4	22255.6	23142.3	13209.3
P08081	P08081	CLCA_RAT	Clta	Clathrin light chain A	1	QDEQLQK	QDEQLQK	1	QDEQLQK1			14969.1
P08081	P08081	CLCA_RAT	Clta	Clathrin light chain A	1	QDEQLQK	QDEQLQK	2	QDEQLQK2	12141.3		103166
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	QDEVNAAWDR	QDEVNAAWDR	2	QDEVNAAWDR2	6729.48	5501.87	5148.15
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	QDFCHGQVMWPPLSALQVK	QDFC(UniMod:4)HGQVMWPPLSALQVK	3	QDFC(UniMod:4)HGQVMWPPLSALQVK3	17592.3	20750.7	18462.7
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	QDFDENDILR	QDFDENDILR	2	QDFDENDILR2	3991.77		5753.06
Q68FQ7	Q68FQ7	RPAP3_RAT	Rpap3	RNA polymerase II-associated protein 3	1	QDFETVLLLEPGNK	QDFETVLLLEPGNK	2	QDFETVLLLEPGNK2	3831.18	5889.9	
Q704S8	Q704S8	CACP_RAT	Crat	Carnitine O-acetyltransferase	1	QDFMDLQGQLR	QDFMDLQGQLR	2	QDFMDLQGQLR2	7076.78	3731.38	5220.77
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	QDFNMMEQK	QDFNMMEQK	2	QDFNMMEQK2	79701.1	95235.9	91870.2
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	QDFNMMEQR	QDFNMMEQR	2	QDFNMMEQR2	111795	133734	116051
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	QDFNPSEYDLK	QDFNPSEYDLK	2	QDFNPSEYDLK2	7858.77	6772.91	6784.62
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	QDFPGTK	QDFPGTK	2	QDFPGTK2	17860.3	28591.8	15632.7
Q6PCU2	Q6PCU2	VATE1_RAT	Atp6v1e1	V-type proton ATPase subunit E 1	1	QDFPLVK	QDFPLVK	2	QDFPLVK2	17027.1	11150.3	13518.1
Q63616	Q63616	VP33B_RAT	Vps33b	Vacuolar protein sorting-associated protein 33B	1	QDFQELIK	QDFQELIK	2	QDFQELIK2	5342.94	4990.85	4181.52
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	QDFSGTMK	QDFSGTMK	2	QDFSGTMK2	39517.9	49447.8	36021.7
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	QDFVDEMAK	QDFVDEMAK	2	QDFVDEMAK2	49090.9	55439	35184.1
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	QDGGWSHWSPWSSCSVTCGDGVITR	QDGGWSHWSPWSSC(UniMod:4)SVTC(UniMod:4)GDGVITR	3	QDGGWSHWSPWSSC(UniMod:4)SVTC(UniMod:4)GDGVITR3	122241	118692	114429
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	QDGHLWCSTTSNYEQDQK	QDGHLWC(UniMod:4)STTSNYEQDQK	3	QDGHLWC(UniMod:4)STTSNYEQDQK3	223378	227730	276738
A0A8I6ASC6	A0A8I6ASC6	A0A8I6ASC6_RAT	Igdcc4	Immunoglobulin superfamily, DCC subclass, member 4	1	QDGKPISTDVIVLGR	QDGKPISTDVIVLGR	3	QDGKPISTDVIVLGR3	31143.2	5871.01	16338.6
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	QDGPLPKPHSVSLNDTETR	QDGPLPKPHSVSLNDTETR	3	QDGPLPKPHSVSLNDTETR3	10185.5		5083.88
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	QDGPLPKPHSVSLNDTETR	QDGPLPKPHSVSLNDTETR	4	QDGPLPKPHSVSLNDTETR4	69252.4	67204.1	58785.9
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	QDGPLPKPHSVSLNDTETRK	QDGPLPKPHSVSLNDTETRK	4	QDGPLPKPHSVSLNDTETRK4	36176.9	30957.2	29027.6
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	QDGSESEAATLAMVGR	QDGSESEAATLAMVGR	2	QDGSESEAATLAMVGR2	61988.9	60824.1	60045
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	QDGSESEAATLAMVGR	QDGSESEAATLAMVGR	3	QDGSESEAATLAMVGR3		7591.5	11549.3
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	QDGSLFHQETK	QDGSLFHQETK	3	QDGSLFHQETK3	14071	5991.88	12813.5
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	QDGSPFAMEQIK	QDGSPFAMEQIK	2	QDGSPFAMEQIK2	25043.4	17275.6	19778.9
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	QDGSVDFGR	QDGSVDFGR	2	QDGSVDFGR2	114469	2.1991e+07	2.33187e+07
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	QDGSVDFGRK	QDGSVDFGRK	2	QDGSVDFGRK2	844117	922918	927086
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	QDGSVNFFTNWQHYK	QDGSVNFFTNWQHYK	2	QDGSVNFFTNWQHYK2	6392.73	5934.33	2380.19
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	QDGSVNFFTNWQHYK	QDGSVNFFTNWQHYK	3	QDGSVNFFTNWQHYK3	34946.3	23910.6	34912.7
F1M8P2	F1M8P2	F1M8P2_RAT	Zyg11b	Zyg-11 family member B, cell cycle regulator	1	QDGTLCLQEPGVFPQEVADR	QDGTLC(UniMod:4)LQEPGVFPQEVADR	3	QDGTLC(UniMod:4)LQEPGVFPQEVADR3	3445.62		7870.8
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	QDGVCTDLDECSVR	QDGVC(UniMod:4)TDLDEC(UniMod:4)SVR	2	QDGVC(UniMod:4)TDLDEC(UniMod:4)SVR2	1673.09	2635.24	
F1LW91	F1LW91	F1LW91_RAT	Numa1	Nuclear mitotic apparatus protein 1	1	QDHAQQLATIVEAR	QDHAQQLATIVEAR	3	QDHAQQLATIVEAR3		3111.03	
Q5M860	Q5M860	Q5M860_RAT	Arhgdib	Rho GDP dissociation inhibitor beta	1	QDHLTWEWNLAIK	QDHLTWEWNLAIK	3	QDHLTWEWNLAIK3	11783.3	6372.52	1935.83
Q07936	Q07936	ANXA2_RAT	Anxa2	Annexin A2	1	QDIAFAYQR	QDIAFAYQR	2	QDIAFAYQR2	8204.7	11588.9	3003.86
Q4FZX7	Q4FZX7	SRPRB_RAT	Srprb	Signal recognition particle receptor subunit beta	1	QDIAMAK	QDIAMAK	2	QDIAMAK2	39876.8	55558.2	56516.1
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	QDIAVISDTYFPR	QDIAVISDTYFPR	2	QDIAVISDTYFPR2	42877.2	44641.9	39817
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	QDIAVISDTYFPR	QDIAVISDTYFPR	3	QDIAVISDTYFPR3	3034.06		2925.94
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	QDIFQEQLAAIPEFVNLGPLFK	QDIFQEQLAAIPEFVNLGPLFK	3	QDIFQEQLAAIPEFVNLGPLFK3	19408.5		
Q4KLN7	Q4KLN7	ARFG3_RAT	Arfgap3	ADP-ribosylation factor GTPase-activating protein 3	1	QDILAIFK	QDILAIFK	2	QDILAIFK2	6113.78	1118.24	3011.27
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	QDIMPTTTTK	QDIMPTTTTK	2	QDIMPTTTTK2	33566.7	33277.8	39435.2
Q08851	Q08851	STX5_RAT	Stx5	Syntaxin-5	1	QDINSLNK	QDINSLNK	2	QDINSLNK2	8499.67	10813.8	4053.97
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	QDIVITALDNVEAR	QDIVITALDNVEAR	2	QDIVITALDNVEAR2	19603.1	31454.7	19577.2
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	QDIVITALDNVEAR	QDIVITALDNVEAR	3	QDIVITALDNVEAR3	9692.26	8332.35	6449.12
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	QDKDDIINIFSVASGHLYER	QDKDDIINIFSVASGHLYER	3	QDKDDIINIFSVASGHLYER3	11577.2	11191.3	3640.81
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	QDKDDIINIFSVASGHLYER	QDKDDIINIFSVASGHLYER	4	QDKDDIINIFSVASGHLYER4	59839.9	67194.5	53173.3
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	QDLAAIPDFQSGAMENWGLTTYR	QDLAAIPDFQSGAMENWGLTTYR	3	QDLAAIPDFQSGAMENWGLTTYR3			3472.59
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QDLADVVQVCEGK	QDLADVVQVC(UniMod:4)EGK	2	QDLADVVQVC(UniMod:4)EGK2	115506	156829	136567
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QDLADVVQVCEGKK	QDLADVVQVC(UniMod:4)EGKK	2	QDLADVVQVC(UniMod:4)EGKK2	1087.52	3939.02	3666.63
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QDLADVVQVCEGKK	QDLADVVQVC(UniMod:4)EGKK	3	QDLADVVQVC(UniMod:4)EGKK3	11125.6	23216.5	20060
P36372	P36372	TAP2_RAT	Tap2	Antigen peptide transporter 2	1	QDLAFFQETK	QDLAFFQETK	2	QDLAFFQETK2	24913.3	20100	30114.4
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	QDLAQLMNSSGSHK	QDLAQLMNSSGSHK	2	QDLAQLMNSSGSHK2	2504.55		
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	QDLAQLMNSSGSHK	QDLAQLMNSSGSHK	3	QDLAQLMNSSGSHK3	32058.2	47328.8	36338.9
P81795	C9WPN6;P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	0	QDLATLDVTK	QDLATLDVTK	2	QDLATLDVTK2	109335	122593	133602
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	QDLAYER	QDLAYER	2	QDLAYER2	199920	227510	199531
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	QDLDQLR	QDLDQLR	2	QDLDQLR2	25477.3	26039.7	30421.9
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	QDLEAEVSK	QDLEAEVSK	2	QDLEAEVSK2	151038	132198	145097
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	QDLEDSLQAQQYFADANEAESWMR	QDLEDSLQAQQYFADANEAESWMR	3	QDLEDSLQAQQYFADANEAESWMR3	3038.83		1001.29
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	QDLELSR	QDLELSR	2	QDLELSR2	34766.7	32857.6	42690.6
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	QDLFESSSANTEDK	QDLFESSSANTEDK	2	QDLFESSSANTEDK2	80668.9	95513.1	85868.6
B1PLB1	B1PLB1	B1PLB1_RAT	Cd34	CD34 molecule	1	QDLGSHQSYSR	QDLGSHQSYSR	2	QDLGSHQSYSR2	40876.6	50941.7	37907.1
B1PLB1	B1PLB1	B1PLB1_RAT	Cd34	CD34 molecule	1	QDLGSHQSYSR	QDLGSHQSYSR	3	QDLGSHQSYSR3	242518	245484	238636
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	QDLHLEPFYWK	QDLHLEPFYWK	3	QDLHLEPFYWK3	10596.9	22369.3	21946.5
A0A0G2JY11	A0A0G2JY11	A0A0G2JY11_RAT	Tspan9	Tetraspanin	1	QDLKEGLLLYNTENNVGLK	QDLKEGLLLYNTENNVGLK	3	QDLKEGLLLYNTENNVGLK3		2471.36	
Q63803	Q63803	GNAS1_RAT	Gnas	Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas	1	QDLLAEK	QDLLAEK	2	QDLLAEK2	74403	58781.7	50980.9
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	QDLLNVLAR	QDLLNVLAR	2	QDLLNVLAR2	6850.83	2154.44	6519.14
Q9JMA8	Q9JMA8	Q9JMA8_RAT	Extl3	Exostosin-like glycosyltransferase 3	1	QDLLQLK	QDLLQLK	2	QDLLQLK2		2015.48	3135.63
P37996	P37996	ARL3_RAT	Arl3	ADP-ribosylation factor-like protein 3	1	QDLLTAAPAAEIAEGLNLHTIR	QDLLTAAPAAEIAEGLNLHTIR	3	QDLLTAAPAAEIAEGLNLHTIR3	22130.8	30122.2	35000.3
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	QDLLVASLFR	QDLLVASLFR	2	QDLLVASLFR2	12884.3	7499.33	8468.86
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	QDLNDNDAYSVFQSIGLK	QDLNDNDAYSVFQSIGLK	3	QDLNDNDAYSVFQSIGLK3	1.3578e+06	1.25087e+06	1.25801e+06
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	QDLPALEEKPR	QDLPALEEKPR	2	QDLPALEEKPR2	51553.3	61446.1	51860.5
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	QDLPALEEKPR	QDLPALEEKPR	3	QDLPALEEKPR3	707272	807788	848313
P62332	P62332	ARF6_RAT	Arf6	ADP-ribosylation factor 6	1	QDLPDAMKPHEIQEK	QDLPDAMKPHEIQEK	3	QDLPDAMKPHEIQEK3	56946.9	46105.5	47659.2
P62332	P62332	ARF6_RAT	Arf6	ADP-ribosylation factor 6	1	QDLPDAMKPHEIQEK	QDLPDAMKPHEIQEK	4	QDLPDAMKPHEIQEK4	36634.1	37286.5	42425.3
O08697	O08697	ARL2_RAT	Arl2	ADP-ribosylation factor-like protein 2	1	QDLPGALSCNAIQEALELDSIR	QDLPGALSC(UniMod:4)NAIQEALELDSIR	3	QDLPGALSC(UniMod:4)NAIQEALELDSIR3	9748.49	8731.28	7417.58
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	QDLPNADEKPR	QDLPNADEKPR	2	QDLPNADEKPR2	7169.86	8413.7	5348.47
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	QDLPNADEKPR	QDLPNADEKPR	3	QDLPNADEKPR3	60776.8	69052.6	67196
P61751	P61751	ARF4_RAT	Arf4	ADP-ribosylation factor 4	1	QDLPNAMAISEMTDK	QDLPNAMAISEMTDK	2	QDLPNAMAISEMTDK2	81596.9	91536.3	107490
P84079	P61206;P84082;P84079	ARF1_RAT	Arf1	ADP-ribosylation factor 1	0	QDLPNAMNAAEITDK	QDLPNAMNAAEITDK	2	QDLPNAMNAAEITDK2	661346	621229	682660
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	QDLQDER	QDLQDER	2	QDLQDER2	10369.4	13218.2	11801.6
D3ZQQ1	D3ZQQ1	D3ZQQ1_RAT	Aftph	Aftiphilin	1	QDLQTLQQDEFLNSR	QDLQTLQQDEFLNSR	2	QDLQTLQQDEFLNSR2	1658.31	1693.8	2640.33
P28064	P28064	PSB8_RAT	Psmb8	Proteasome subunit beta type-8	1	QDLSPEEAYDLAR	QDLSPEEAYDLAR	2	QDLSPEEAYDLAR2	854777	769898	854416
P28064	P28064	PSB8_RAT	Psmb8	Proteasome subunit beta type-8	1	QDLSPEEAYDLAR	QDLSPEEAYDLAR	3	QDLSPEEAYDLAR3	29984.6	21730.8	35785
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	QDLSPELLK	QDLSPELLK	2	QDLSPELLK2	80079.3	85132.9	85153.1
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	QDLSSSLTDDSK	QDLSSSLTDDSK	2	QDLSSSLTDDSK2	6266.2	3503.66	
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	QDLVFQYVEDPTIVR	QDLVFQYVEDPTIVR	2	QDLVFQYVEDPTIVR2	8760.67	14060.6	6787.95
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	QDLVFQYVEDPTIVR	QDLVFQYVEDPTIVR	3	QDLVFQYVEDPTIVR3	1397.76		1525.84
P61212	P61212	ARL1_RAT	Arl1	ADP-ribosylation factor-like protein 1	1	QDMEQAMTPSEMANALGLPALK	QDMEQAMTPSEMANALGLPALK	3	QDMEQAMTPSEMANALGLPALK3	14402.3	15781.4	25746.3
Q9JKC9	Q9JKC9	SYNRG_RAT	Synrg	Synergin gamma	1	QDMPMVDR	QDMPMVDR	2	QDMPMVDR2	13053.7	7273.36	13037.2
P84083	P84083	ARF5_RAT	Arf5	ADP-ribosylation factor 5	1	QDMPNAMPVSELTDK	QDMPNAMPVSELTDK	2	QDMPNAMPVSELTDK2	134169	132019	119061
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	QDNEQLAR	QDNEQLAR	2	QDNEQLAR2	10609	11190.4	
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	QDNESNVDPR	QDNESNVDPR	2	QDNESNVDPR2	29965.9	27453.8	27304.8
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	QDNESNVDPRDDVFGYPQQFEDKPPLSK	QDNESNVDPRDDVFGYPQQFEDKPPLSK	4	QDNESNVDPRDDVFGYPQQFEDKPPLSK4	2605.73	2347	
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	QDNIAVK	QDNIAVK	1	QDNIAVK1	1462.83	3163.6	1434.22
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	QDNIAVK	QDNIAVK	2	QDNIAVK2	68644.2	105224	60236.6
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	QDNKENWLHSQQR	QDNKENWLHSQQR	3	QDNKENWLHSQQR3	9928.13	15852	18435.7
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	QDNKENWLHSQQR	QDNKENWLHSQQR	4	QDNKENWLHSQQR4	30653	29201.9	36750.2
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	QDNLDAFNERDPYK	QDNLDAFNERDPYK	2	QDNLDAFNERDPYK2	3204.29		5579.02
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	QDNLDAFNERDPYK	QDNLDAFNERDPYK	3	QDNLDAFNERDPYK3	58021.3	60005.9	70529.7
Q5XIN4	Q5XIN4	Q5XIN4_RAT	Mtmr9	Myotubularin related protein 9	1	QDNTEELWLLHSNIDAIDKR	QDNTEELWLLHSNIDAIDKR	4	QDNTEELWLLHSNIDAIDKR4	10477.5	3164.67	10449.6
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	QDNYNEEVADLK	QDNYNEEVADLK	2	QDNYNEEVADLK2	6037.37	6789.41	13049.7
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	QDPEVPFWR	QDPEVPFWR	2	QDPEVPFWR2	24568.8	34221.4	25730.4
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	QDPGIPNEEK	QDPGIPNEEK	2	QDPGIPNEEK2	241688	272945	235508
Q6AYS6	Q6AYS6	SNX17_RAT	Snx17	Sorting nexin-17	1	QDPLLGSSETFNSFLR	QDPLLGSSETFNSFLR	2	QDPLLGSSETFNSFLR2	10971.9	10183.1	13309.3
D3ZF92	D3ZF92	TNR21_RAT	Tnfrsf21	Tumor necrosis factor receptor superfamily member 21	1	QDPSAIMEK	QDPSAIMEK	2	QDPSAIMEK2			2391.05
P50503	P50503;A0A8I6GLD3	F10A1_RAT	St13	Hsc70-interacting protein	0	QDPSVLHTEEMR	QDPSVLHTEEMR	2	QDPSVLHTEEMR2	67923.5	79933.1	56971.8
P50503	P50503;A0A8I6GLD3	F10A1_RAT	St13	Hsc70-interacting protein	0	QDPSVLHTEEMR	QDPSVLHTEEMR	3	QDPSVLHTEEMR3	279652	358550	346391
D4A3I5	D4A3I5	D4A3I5_RAT	Fhip2a	FHF complex subunit HOOK interacting protein 2A	1	QDPYLVNFFLENK	QDPYLVNFFLENK	2	QDPYLVNFFLENK2	9566.9	8638.39	3110.16
D4A3I5	D4A3I5	D4A3I5_RAT	Fhip2a	FHF complex subunit HOOK interacting protein 2A	1	QDPYLVNFFLENK	QDPYLVNFFLENK	3	QDPYLVNFFLENK3	1863.6	3299.75	2389.54
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	QDQLQLLIEEQDLER	QDQLQLLIEEQDLER	3	QDQLQLLIEEQDLER3	5006.51	5733.31	4900.99
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	QDQSIVLLGSSGSGK	QDQSIVLLGSSGSGK	2	QDQSIVLLGSSGSGK2	1681.32	2489.05	
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	QDQVCIAR	QDQVC(UniMod:4)IAR	2	QDQVC(UniMod:4)IAR2	270818	308927	284305
Q5XI64	Q5XI64	ABHD6_RAT	Abhd6	Monoacylglycerol lipase ABHD6	1	QDQVLDVSGADILAK	QDQVLDVSGADILAK	2	QDQVLDVSGADILAK2	23152.5	19064.2	21172.5
P08650	P08650	CO5_RAT	C5	Complement C5	1	QDQYSICNSLLWLIEK	QDQYSIC(UniMod:4)NSLLWLIEK	3	QDQYSIC(UniMod:4)NSLLWLIEK3	4804.22	2344.9	2136.69
Q63621	Q63621	IL1AP_RAT	Il1rap	Interleukin-1 receptor accessory protein	1	QDRDLEEPINFR	QDRDLEEPINFR	3	QDRDLEEPINFR3	63578.1	69149.4	51605
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	QDRVPPSR	QDRVPPSR	1	QDRVPPSR1			5868.28
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	QDRVPPSR	QDRVPPSR	2	QDRVPPSR2			410368
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	QDSCILLR	QDSC(UniMod:4)ILLR	2	QDSC(UniMod:4)ILLR2	5655.04	5894.74	5846.53
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	QDSGDPAMIHK	QDSGDPAMIHK	2	QDSGDPAMIHK2	452460	385776	398664
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	QDSGDPAMIHK	QDSGDPAMIHK	3	QDSGDPAMIHK3	1.89196e+06	1.86976e+06	2.092e+06
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	QDSIDLFLGNYSVDELDSHSPLSVPR	QDSIDLFLGNYSVDELDSHSPLSVPR	3	QDSIDLFLGNYSVDELDSHSPLSVPR3	10726.1	16203.3	
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	QDSLESMK	QDSLESMK	2	QDSLESMK2	9437.85	6092.95	7849.72
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	QDSLSSEVDTLK	QDSLSSEVDTLK	2	QDSLSSEVDTLK2	11526.2	11187.3	7969.7
P51146	P51146	RAB4B_RAT	Rab4b	Ras-related protein Rab-4B	1	QDSNHTIGVEFGSR	QDSNHTIGVEFGSR	3	QDSNHTIGVEFGSR3	22533.6	19668.8	15269.7
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	QDSNVNEEWK	QDSNVNEEWK	2	QDSNVNEEWK2	7683.56	3582.54	3334.8
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	QDSPPPKPPR	QDSPPPKPPR	2	QDSPPPKPPR2			4458.52
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	QDSQGALMVYPYYGEK	QDSQGALMVYPYYGEK	2	QDSQGALMVYPYYGEK2	17660.2	30957.4	25642.5
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	QDSQGALMVYPYYGEK	QDSQGALMVYPYYGEK	3	QDSQGALMVYPYYGEK3	10262.8	13679.8	13289.9
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	QDSQTENSDIFQETK	QDSQTENSDIFQETK	2	QDSQTENSDIFQETK2	2521.08	2927.46	2677.88
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	QDSSSEVGENGR	QDSSSEVGENGR	2	QDSSSEVGENGR2			3594.01
Q704S8	Q704S8	CACP_RAT	Crat	Carnitine O-acetyltransferase	1	QDSVVNFLK	QDSVVNFLK	2	QDSVVNFLK2	6338.03	7345.33	7830.17
D3ZHZ3	D3ZHZ3	D3ZHZ3_RAT	Osbpl3	Oxysterol-binding protein	1	QDSWEVVEGLR	QDSWEVVEGLR	2	QDSWEVVEGLR2	6512.53	6914.51	19744.5
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	QDTELQEK	QDTELQEK	2	QDTELQEK2		29733	
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	QDTFAEK	QDTFAEK	2	QDTFAEK2	27722.7	25848.7	29105.4
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	QDTFSGTGFFPLDR	QDTFSGTGFFPLDR	2	QDTFSGTGFFPLDR2	35647.1	52866.2	48889
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	QDTLDASLQSFQQER	QDTLDASLQSFQQER	2	QDTLDASLQSFQQER2	4819.84	4257.2	4259.26
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	QDTQNALK	QDTQNALK	2	QDTQNALK2	13234.5	11755.3	
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	QDTSFMK	QDTSFMK	2	QDTSFMK2	9865.87	12244.2	18190.9
P31000	P31000	VIME_RAT	Vim	Vimentin	1	QDVDNASLAR	QDVDNASLAR	2	QDVDNASLAR2	13516.3	10113.5	18256.2
Q63055	Q63055	ARFRP_RAT	Arfrp1	ADP-ribosylation factor-related protein 1	1	QDVETCLSIPDIK	QDVETC(UniMod:4)LSIPDIK	2	QDVETC(UniMod:4)LSIPDIK2	16377.7	9934.99	10804.6
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	QDVHLLMTNCIK	QDVHLLMTNC(UniMod:4)IK	3	QDVHLLMTNC(UniMod:4)IK3	37159.9	39318.9	36532.4
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	QDVIYELIQTELHHVR	QDVIYELIQTELHHVR	3	QDVIYELIQTELHHVR3	45023.2	34328	13893.6
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	QDVIYELIQTELHHVR	QDVIYELIQTELHHVR	4	QDVIYELIQTELHHVR4	21365.4	22658.7	25917.7
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	QDVLNWLNEER	QDVLNWLNEER	2	QDVLNWLNEER2	69418.9	60864.4	64508.2
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	QDVNECSQNPGLCR	QDVNEC(UniMod:4)SQNPGLC(UniMod:4)R	2	QDVNEC(UniMod:4)SQNPGLC(UniMod:4)R2	29385.7	36330.5	30713.6
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	QDVNECSQNPGLCR	QDVNEC(UniMod:4)SQNPGLC(UniMod:4)R	3	QDVNEC(UniMod:4)SQNPGLC(UniMod:4)R3	17956.8	16345.5	15499.2
F1LTX4	F1LTX4	F1LTX4_RAT	Lrrn4	Leucine rich repeat neuronal 4	1	QDVSCDYHPCR	QDVSC(UniMod:4)DYHPC(UniMod:4)R	3	QDVSC(UniMod:4)DYHPC(UniMod:4)R3	9409.98	13092.8	11940.8
D3ZR63	D3ZR63	D3ZR63_RAT	Gfod1	Glucose-fructose oxidoreductase domain containing 1	1	QDVTVVGSAGR	QDVTVVGSAGR	2	QDVTVVGSAGR2	4486.29	6930.78	4715.8
D3ZHV2	D3ZHV2;A0A8I5ZQD4	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	0	QDVVLIK	QDVVLIK	2	QDVVLIK2	37625.8	31419.4	18688
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	QDVYDLLK	QDVYDLLK	2	QDVYDLLK2	100199	96733.9	106764
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	QDVYGPQPQVR	QDVYGPQPQVR	2	QDVYGPQPQVR2	44955.8	28886.9	48096.8
B5DFN2	D3ZWL6;B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	0	QDVYLLPK	QDVYLLPK	2	QDVYLLPK2	235742	213089	217214
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	QDWGSCPDIF	QDWGSC(UniMod:4)PDIF	2	QDWGSC(UniMod:4)PDIF2	6493.96	12026.2	8768.28
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	QDWSDHAIWWEQK	QDWSDHAIWWEQK	2	QDWSDHAIWWEQK2	30114.2	22494.6	21508.5
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	QDWSDHAIWWEQK	QDWSDHAIWWEQK	3	QDWSDHAIWWEQK3	257065	247333	200692
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	QDWSDHAIWWEQKK	QDWSDHAIWWEQKK	3	QDWSDHAIWWEQKK3	1465.83	20665.9	14949.9
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	QDWSDHAIWWEQKK	QDWSDHAIWWEQKK	4	QDWSDHAIWWEQKK4	17951.3	64691	24851.5
Q0Z843	Q0Z843	Q0Z843_RAT	Fig4	FIG4 phosphoinositide 5-phosphatase	1	QDWSSPQMCAR	QDWSSPQMC(UniMod:4)AR	2	QDWSSPQMC(UniMod:4)AR2	9842.46	4099.18	10375.1
F7EUH5	F7EUH5	F7EUH5_RAT	Plxdc2	Plexin domain containing 2	1	QDWVDSGCPEEVQSK	QDWVDSGC(UniMod:4)PEEVQSK	2	QDWVDSGC(UniMod:4)PEEVQSK2	29528.8	17772.3	30622.4
F7EUH5	F7EUH5	F7EUH5_RAT	Plxdc2	Plexin domain containing 2	1	QDWVDSGCPEEVQSK	QDWVDSGC(UniMod:4)PEEVQSK	3	QDWVDSGC(UniMod:4)PEEVQSK3	10216.6	8999.48	9268.77
G3V7L4	G3V7L4	G3V7L4_RAT	Cdh16	Cadherin 16	1	QDYGVVVNGVSEDPGLANR	QDYGVVVNGVSEDPGLANR	3	QDYGVVVNGVSEDPGLANR3	9531.28	15954.3	16440.9
P21670	P21670	PSA4_RAT	Psma4	Proteasome subunit alpha type-4	1	QDYKEGEMTLK	QDYKEGEMTLK	2	QDYKEGEMTLK2	14273.5	13975.7	14816.6
P21670	P21670	PSA4_RAT	Psma4	Proteasome subunit alpha type-4	1	QDYKEGEMTLK	QDYKEGEMTLK	3	QDYKEGEMTLK3	120235	149303	149394
Q64542	Q64542	AT2B4_RAT	Atp2b4	Plasma membrane calcium-transporting ATPase 4	1	QDYQAVR	QDYQAVR	2	QDYQAVR2	11478.5	10856.9	12291.7
A0A8I5ZRG3	A0A8I5ZRG3	A0A8I5ZRG3_RAT	Frmd4b	FERM domain containing 4B	1	QDYTDAVK	QDYTDAVK	2	QDYTDAVK2	13526	15661.2	21654.4
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	QEAAILDYDRDIAEIIK	QEAAILDYDRDIAEIIK	3	QEAAILDYDRDIAEIIK3	19035.7		
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	QEAAIPLVR	QEAAIPLVR	2	QEAAIPLVR2	670252	617888	616930
Q4V7E6	Q4V7E6	Q4V7E6_RAT	Wwtr1	WW domain containing transcription regulator 1	1	QEAALCR	QEAALC(UniMod:4)R	2	QEAALC(UniMod:4)R2	8831.71	8462.12	7136.66
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	QEAAQLDRPGQGIAVPMGEAHR	QEAAQLDRPGQGIAVPMGEAHR	4	QEAAQLDRPGQGIAVPMGEAHR4	47312.3	57694.6	43254.6
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	QEADDIVR	QEADDIVR	2	QEADDIVR2	98578.6	153005	116051
B1WBY5	B1WBY5	B1WBY5_RAT	Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	1	QEAEAAVR	QEAEAAVR	2	QEAEAAVR2		10850.1	
Q505J8	Q505J8	SYFA_RAT	Farsa	Phenylalanine--tRNA ligase alpha subunit	1	QEAELSPEMISSGSWR	QEAELSPEMISSGSWR	2	QEAELSPEMISSGSWR2	8400.35	6631.89	10500.6
Q9ERE6	Q9ERE6	MPRIP_RAT	Mprip	Myosin phosphatase Rho-interacting protein	1	QEAEPGEPDPEQK	QEAEPGEPDPEQK	2	QEAEPGEPDPEQK2		4195.98	3332.73
P54311	A0A8I5ZM25;P54311;P52287	GBB1_RAT	Gnb1	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1	0	QEAEQLK	QEAEQLK	2	QEAEQLK2	111971	63750.7	76719.9
P54313	Q3LUD4;O35353;P54313	GBB2_RAT	Gnb2	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2	0	QEAEQLR	QEAEQLR	2	QEAEQLR2		521548	
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	QEAFLENEDLGNSVGSVEALLQK	QEAFLENEDLGNSVGSVEALLQK	3	QEAFLENEDLGNSVGSVEALLQK3	1278.48	8017.53	4335.29
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	QEAFLLNEDLGDSLDSVEALLK	QEAFLLNEDLGDSLDSVEALLK	3	QEAFLLNEDLGDSLDSVEALLK3	8183.98	5404.88	
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	QEAFLLNEDLGDSLDSVEALLKK	QEAFLLNEDLGDSLDSVEALLKK	3	QEAFLLNEDLGDSLDSVEALLKK3	10905.3	8347.74	6621.62
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	QEAFSIR	QEAFSIR	2	QEAFSIR2	24281.6	23801.3	29791.7
F1LM81	F1LM81	TM1L1_RAT	Tom1l1	TOM1-like protein 1	1	QEAGQISPSRPTSVPTAPALSSIIAPK	QEAGQISPSRPTSVPTAPALSSIIAPK	3	QEAGQISPSRPTSVPTAPALSSIIAPK3	4386.11	4783.06	2193.73
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	QEAIDEVK	QEAIDEVK	2	QEAIDEVK2	5371.82	2464.73	3916.45
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	QEAIHVQAPGLLR	QEAIHVQAPGLLR	3	QEAIHVQAPGLLR3	49036.6	46188.9	43262.7
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	QEAIPEDVIQK	QEAIPEDVIQK	2	QEAIPEDVIQK2	29835.5	14264.3	16590.9
D3ZXD8	D3ZXD8	TM245_RAT	Tmem245	Transmembrane protein 245	1	QEALAPWPITGLGK	QEALAPWPITGLGK	2	QEALAPWPITGLGK2	100569	99559.6	81089.8
P01026	P01026	CO3_RAT	C3	Complement C3	1	QEALELIK	QEALELIK	1	QEALELIK1	6707.35	5169.36	2393.82
P01026	P01026	CO3_RAT	C3	Complement C3	1	QEALELIK	QEALELIK	2	QEALELIK2	132790	128065	111889
P01026	P01026	CO3_RAT	C3	Complement C3	1	QEALELIKK	QEALELIKK	2	QEALELIKK2	4624.19	1773.23	
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	QEALEWLLR	QEALEWLLR	2	QEALEWLLR2	66676.7	43260.3	47681.9
D3ZAZ0	D3ZAZ0	D3ZAZ0_RAT	Eif3m	Eukaryotic translation initiation factor 3 subunit M	1	QEALIESLCEK	QEALIESLC(UniMod:4)EK	2	QEALIESLC(UniMod:4)EK2	12157.8	5748	11659.3
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	QEALKNDLVEALK	QEALKNDLVEALK	3	QEALKNDLVEALK3	3726.86	2879.81	5292.49
Q811U3	Q8K3M6;Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	0	QEALLAAISEK	QEALLAAISEK	2	QEALLAAISEK2	9252.96	5269.34	11955.5
Q8CHI9	Q8CHI9	CHSTF_RAT	Chst15	Carbohydrate sulfotransferase 15	1	QEALMTK	QEALMTK	2	QEALMTK2	19022.6	35126.9	19148.6
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	QEALVAR	QEALVAR	2	QEALVAR2	376861	304811	454029
A0A0G2K7U7	A0A0G2K7U7	A0A0G2K7U7_RAT	Ankrd27	Ankyrin repeat domain 27	1	QEAQMNLMK	QEAQMNLMK	2	QEAQMNLMK2	5036.33		
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	QEASFLK	QEASFLK	2	QEASFLK2	12706.2	7740.13	16088.4
Q63768	Q63768	CRK_RAT	Crk	Adapter molecule crk	1	QEAVALLQGQR	QEAVALLQGQR	2	QEAVALLQGQR2	28169	26988.3	24452.2
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	QEAVTVPVCEDQLK	QEAVTVPVC(UniMod:4)EDQLK	2	QEAVTVPVC(UniMod:4)EDQLK2	4437.82	3494.69	4039.07
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	QECCCALK	QEC(UniMod:4)C(UniMod:4)C(UniMod:4)ALK	2	QEC(UniMod:4)C(UniMod:4)C(UniMod:4)ALK2	25086.4	24886.1	20849.7
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	QECLDSR	QEC(UniMod:4)LDSR	2	QEC(UniMod:4)LDSR2	1.61109e+06	1.61317e+06	1.76644e+06
D3ZER6	D3ZER6	D3ZER6_RAT	Tnpo2	Transportin 2	1	QECLNNIGDASSLIR	QEC(UniMod:4)LNNIGDASSLIR	2	QEC(UniMod:4)LNNIGDASSLIR2	26002.8	40157.6	31699.7
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	QEDACQGDSGGPHVTR	QEDAC(UniMod:4)QGDSGGPHVTR	2	QEDAC(UniMod:4)QGDSGGPHVTR2	1.59178e+06	1.82563e+06	1.55641e+06
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	QEDACQGDSGGPHVTR	QEDAC(UniMod:4)QGDSGGPHVTR	3	QEDAC(UniMod:4)QGDSGGPHVTR3	1.16337e+07	1.2211e+07	1.20905e+07
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	QEDACQGDSGGPHVTR	QEDAC(UniMod:4)QGDSGGPHVTR	4	QEDAC(UniMod:4)QGDSGGPHVTR4	77723	105429	101230
Q6AYE5	Q6AYE5	OAF_RAT	Oaf	Out at first protein homolog	1	QEDAQFWTER	QEDAQFWTER	2	QEDAQFWTER2	15536.9	5809.22	8572.91
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	QEDCCGTVGTSWGFNK	QEDC(UniMod:4)C(UniMod:4)GTVGTSWGFNK	2	QEDC(UniMod:4)C(UniMod:4)GTVGTSWGFNK2	124388	109018	106770
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	QEDCCGTVGTSWGFNK	QEDC(UniMod:4)C(UniMod:4)GTVGTSWGFNK	3	QEDC(UniMod:4)C(UniMod:4)GTVGTSWGFNK3	12182.7	9651.82	12885.8
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	QEDDLNTR	QEDDLNTR	2	QEDDLNTR2	22470	8.74348e+06	15756.1
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	QEDDLNTRTNFDNDIALVQLKDPVK	QEDDLNTRTNFDNDIALVQLKDPVK	3	QEDDLNTRTNFDNDIALVQLKDPVK3	11540.4	12019.6	10028.4
B2GV73	B2GV73	B2GV73_RAT	Arpc3	Actin-related protein 2/3 complex subunit 3	1	QEDETMR	QEDETMR	2	QEDETMR2	64724.6		
P54001	P54001	P4HA1_RAT	P4ha1	Prolyl 4-hydroxylase subunit alpha-1	1	QEDEWDKPR	QEDEWDKPR	3	QEDEWDKPR3	9801.94	12729.7	24235.8
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	QEDFMTTMDANEEK	QEDFMTTMDANEEK	2	QEDFMTTMDANEEK2	51928.7	63186.1	59899.3
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	QEDFQLLCPDGTK	QEDFQLLC(UniMod:4)PDGTK	2	QEDFQLLC(UniMod:4)PDGTK2	1.58695e+06	1.56487e+06	1.56122e+06
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	QEDFQLLCPDGTK	QEDFQLLC(UniMod:4)PDGTK	3	QEDFQLLC(UniMod:4)PDGTK3	67476	51649.9	55872.6
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	QEDGEFWMSFSDFLR	QEDGEFWMSFSDFLR	2	QEDGEFWMSFSDFLR2	85657.8	111759	122588
P09760	P09760	FER_RAT	Fer	Tyrosine-protein kinase Fer	1	QEDGGVYSSSGLK	QEDGGVYSSSGLK	2	QEDGGVYSSSGLK2	7626.41	6967.95	8193.17
Q4V7F2	Q4V7F2	CREL1_RAT	Creld1	Protein disulfide isomerase Creld1	1	QEDGICVK	QEDGIC(UniMod:4)VK	2	QEDGIC(UniMod:4)VK2	21538.5	20964.1	22804.9
P55146	P55146	TYRO3_RAT	Tyro3	Tyrosine-protein kinase receptor TYRO3	1	QEDGSFVK	QEDGSFVK	2	QEDGSFVK2	6215.95	5791.65	
M0R4M1	M0R4M1	M0R4M1_RAT	Nlrc5	NLR family, CARD domain containing 5	1	QEDHSEAMALR	QEDHSEAMALR	3	QEDHSEAMALR3	2756.06	6151.48	6284.79
P14882	P14882	PCCA_RAT	Pcca	Propionyl-CoA carboxylase alpha chain, mitochondrial	1	QEDIPISGWAVECR	QEDIPISGWAVEC(UniMod:4)R	2	QEDIPISGWAVEC(UniMod:4)R2	11471.9	12945.2	13086.2
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	QEDVIATANLSR	QEDVIATANLSR	2	QEDVIATANLSR2	1.65846e+06	1.52844e+06	1.97431e+06
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	QEDVIATANLSR	QEDVIATANLSR	3	QEDVIATANLSR3	35304.8	26207.9	27960.1
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	QEDVSVQLEALDIMADMLSR	QEDVSVQLEALDIMADMLSR	3	QEDVSVQLEALDIMADMLSR3	9106.29		
Q4FZV0	Q4FZV0	MANBA_RAT	Manba	Beta-mannosidase	1	QEDWSYSSR	QEDWSYSSR	2	QEDWSYSSR2	26193.9	10282.8	10431.3
Q63768	Q63768	CRK_RAT	Crk	Adapter molecule crk	1	QEEAEYVR	QEEAEYVR	2	QEEAEYVR2	10354.2	13127.4	13113
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	QEEALAEFLQR	QEEALAEFLQR	2	QEEALAEFLQR2	6001.32	12202.6	8024.22
Q99MS0	Q99MS0	S14L2_RAT	Sec14l2	SEC14-like protein 2	1	QEEALAK	QEEALAK	2	QEEALAK2	7778.53	8491.51	9913.61
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	QEEASGGPLAPK	QEEASGGPLAPK	2	QEEASGGPLAPK2	230644	228119	262763
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	QEEATALEEDSTDWEK	QEEATALEEDSTDWEK	2	QEEATALEEDSTDWEK2	9748.28	4316.56	6257.22
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	QEECSPQDNALGLMHLR	QEEC(UniMod:4)SPQDNALGLMHLR	3	QEEC(UniMod:4)SPQDNALGLMHLR3	6449.52		6170.38
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	QEEDLMNINK	QEEDLMNINK	2	QEEDLMNINK2	313599	283081	232614
Q562B5	Q562B5	PGAM5_RAT	Pgam5	Serine/threonine-protein phosphatase PGAM5, mitochondrial	1	QEEDSYEIFICHANVIR	QEEDSYEIFIC(UniMod:4)HANVIR	3	QEEDSYEIFIC(UniMod:4)HANVIR3	5427.98	4938.46	6276.13
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	QEEEELR	QEEEELR	2	QEEEELR2	147387	150577	
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	QEEESGDFK	QEEESGDFK	2	QEEESGDFK2	1.45776e+06	1.72102e+06	1.56809e+06
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	QEEESGDFKK	QEEESGDFKK	2	QEEESGDFKK2	14620.3		190578
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	QEEESGDFKK	QEEESGDFKK	3	QEEESGDFKK3	767262		1.09617e+06
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	QEEETAQLK	QEEETAQLK	2	QEEETAQLK2	15785.1	16143.8	10878.6
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	QEEETLSFIR	QEEETLSFIR	2	QEEETLSFIR2	4832.15	4993.27	8184.19
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	QEEFESIEEALPDTDVLYMTR	QEEFESIEEALPDTDVLYMTR	3	QEEFESIEEALPDTDVLYMTR3	35414.4	38908	
Q9Z1Y3	Q9Z1Y3	CADH2_RAT	Cdh2	Cadherin-2	1	QEEGLHAGTMLTTLTAQDPDR	QEEGLHAGTMLTTLTAQDPDR	3	QEEGLHAGTMLTTLTAQDPDR3	15498.8	15848.4	6133.67
Q9Z1Y3	Q9Z1Y3	CADH2_RAT	Cdh2	Cadherin-2	1	QEEGLHAGTMLTTLTAQDPDRYMQQNIR	QEEGLHAGTMLTTLTAQDPDRYMQQNIR	4	QEEGLHAGTMLTTLTAQDPDRYMQQNIR4	3606.95		5156.58
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	QEEGSETVVEEGGQQASGEHQTRPK	QEEGSETVVEEGGQQASGEHQTRPK	3	QEEGSETVVEEGGQQASGEHQTRPK3	20944.1	18145.1	15562.9
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	QEEGSETVVEEGGQQASGEHQTRPK	QEEGSETVVEEGGQQASGEHQTRPK	4	QEEGSETVVEEGGQQASGEHQTRPK4	206475	269025	228167
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	QEEIAVTGK	QEEIAVTGK	2	QEEIAVTGK2	2235.63	6785.81	3567.91
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	QEEIQETFIR	QEEIQETFIR	2	QEEIQETFIR2	7901.95	10224.8	10893.1
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	QEEIQQK	QEEIQQK	1	QEEIQQK1			1341.35
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	QEEIQQK	QEEIQQK	2	QEEIQQK2			50389
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QEEIVKR	QEEIVKR	2	QEEIVKR2	10895.9		5861.25
P51111	P51111	HD_RAT	Htt	Huntingtin	1	QEEIWPALGDR	QEEIWPALGDR	2	QEEIWPALGDR2	27060	23702.8	36086
P04916	P04916	RET4_RAT	Rbp4	Retinol-binding protein 4	1	QEELCLER	QEELC(UniMod:4)LER	2	QEELC(UniMod:4)LER2	21502.4	13554.2	9927.6
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	QEELETATR	QEELETATR	2	QEELETATR2	109633	107351	124331
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	QEELNNQLFLYDTHQNLR	QEELNNQLFLYDTHQNLR	3	QEELNNQLFLYDTHQNLR3	3235.3	6903.27	7283.61
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	QEEMELNEVGFK	QEEMELNEVGFK	2	QEEMELNEVGFK2	24077.6	21444.9	14801.2
D3ZX21	D3ZX21	D3ZX21_RAT	Ap4e1	AP-4 complex subunit epsilon	1	QEEQLSQEK	QEEQLSQEK	2	QEEQLSQEK2			4957.9
Q4KLN3	Q4KLN3	Q4KLN3_RAT	Srpk1	SRSF protein kinase 1	1	QEESESPVERPLTENPPNK	QEESESPVERPLTENPPNK	3	QEESESPVERPLTENPPNK3	10380.6	7578.62	15588.2
Q641Z6	Q641Z6	EHD1_RAT	Ehd1	EH domain-containing protein 1	1	QEESLMPSQAVK	QEESLMPSQAVK	2	QEESLMPSQAVK2	18076	18922	26144.8
Q8R491	Q8R491	EHD3_RAT	Ehd3	EH domain-containing protein 3	1	QEETQRPVQMVK	QEETQRPVQMVK	2	QEETQRPVQMVK2	7371.17	2975.08	7924.79
Q8R491	Q8R491	EHD3_RAT	Ehd3	EH domain-containing protein 3	1	QEETQRPVQMVK	QEETQRPVQMVK	3	QEETQRPVQMVK3	163214	127433	151812
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	QEEVCVIDALLADIR	QEEVC(UniMod:4)VIDALLADIR	2	QEEVC(UniMod:4)VIDALLADIR2	13201.7	10342.4	17819.2
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	QEEVCVIDALLADIR	QEEVC(UniMod:4)VIDALLADIR	3	QEEVC(UniMod:4)VIDALLADIR3	5251.62	6003.78	6255.67
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	QEEVCVIDALLADIRK	QEEVC(UniMod:4)VIDALLADIRK	2	QEEVC(UniMod:4)VIDALLADIRK2		4936.01	
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	QEEVCVIDALLADIRK	QEEVC(UniMod:4)VIDALLADIRK	3	QEEVC(UniMod:4)VIDALLADIRK3	137419	138991	88496.2
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	QEEVNAAWQR	QEEVNAAWQR	2	QEEVNAAWQR2	370589	380526	399174
A0A0G2QC40	A0A8I6B298;A0A0G2QC40	A0A0G2QC40_RAT	Mkrn1	RING-type E3 ubiquitin transferase	0	QEEVTATDLSAK	QEEVTATDLSAK	2	QEEVTATDLSAK2	6502.53	4928.99	5174.49
A0A8I5ZUE7	A0A8I5ZUE7	A0A8I5ZUE7_RAT	Zc3h7b	Zinc finger CCCH-type containing 7B	1	QEEYEAFLLK	QEEYEAFLLK	2	QEEYEAFLLK2	3117.62	1441.05	
D3ZZV1	D3ZZV1;Q6EIX2	D3ZZV1_RAT	Pam16	Presequence translocase associated motor 16	0	QEFAASQAAADAR	QEFAASQAAADAR	2	QEFAASQAAADAR2	5028.16	3532.05	
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	QEFAQHANAFHQWIQETR	QEFAQHANAFHQWIQETR	3	QEFAQHANAFHQWIQETR3	49974.6	71918.1	44185.2
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	QEFAQHANAFHQWIQETR	QEFAQHANAFHQWIQETR	4	QEFAQHANAFHQWIQETR4	189111	213770	250569
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QEFDDAQGK	QEFDDAQGK	2	QEFDDAQGK2	83199.9	85795.8	78745.4
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	QEFEFWYPVDLR	QEFEFWYPVDLR	2	QEFEFWYPVDLR2	9410.44	7787.79	8023.24
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	QEFEHIQGDFGEK	QEFEHIQGDFGEK	3	QEFEHIQGDFGEK3	8191.96	6016.48	2755.22
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	QEFFIALR	QEFFIALR	2	QEFFIALR2	22903.1	23256.3	20037.4
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	QEFGWIIPTMMGNLLSEGR	QEFGWIIPTMMGNLLSEGR	3	QEFGWIIPTMMGNLLSEGR3		4698.92	8196.34
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	QEFHEPGHQEGDPEAEADR	QEFHEPGHQEGDPEAEADR	3	QEFHEPGHQEGDPEAEADR3	2006.23		1637.53
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	QEFHEPGHQEGDPEAEADR	QEFHEPGHQEGDPEAEADR	4	QEFHEPGHQEGDPEAEADR4	15180.1	15313.8	14389.5
Q3ZU82	Q3ZU82	GOGA5_RAT	Golga5	Golgin subfamily A member 5	1	QEFHYVEEDLHR	QEFHYVEEDLHR	4	QEFHYVEEDLHR4		2228.31	2829.05
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QEFIDGILASK	QEFIDGILASK	2	QEFIDGILASK2	47325.4	44331.8	45416.3
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	QEFKATCLVDEEEMKK	QEFKATC(UniMod:4)LVDEEEMKK	3	QEFKATC(UniMod:4)LVDEEEMKK3	39482.3	57379.1	43260.9
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	QEFKATCLVDEEEMKK	QEFKATC(UniMod:4)LVDEEEMKK	4	QEFKATC(UniMod:4)LVDEEEMKK4	18139	12995.6	8297.14
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	QEGDRLSDEDLFK	QEGDRLSDEDLFK	3	QEGDRLSDEDLFK3	25115.1	17525.8	15711.1
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	QEGDRLSDEDLYK	QEGDRLSDEDLYK	3	QEGDRLSDEDLYK3	14810.4	19021.1	14540.9
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	QEGEPNCWSSNNSGISLAAR	QEGEPNC(UniMod:4)WSSNNSGISLAAR	3	QEGEPNC(UniMod:4)WSSNNSGISLAAR3	3488.26	3909.33	5353.67
Q66H15	Q66H15	RMD3_RAT	Rmdn3	Regulator of microtubule dynamics protein 3	1	QEGFQLLLNNK	QEGFQLLLNNK	2	QEGFQLLLNNK2	4736.81	6557.88	3295.4
A0A8I5ZTN5	A0A8I5ZTN5	A0A8I5ZTN5_RAT	Adsl	Adenylosuccinate lyase	1	QEGGDNDLIER	QEGGDNDLIER	2	QEGGDNDLIER2	11692	9298.06	
Q5I0C3	Q5I0C3	MCCA_RAT	Mccc1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	1	QEGIIFIGPPSTAIR	QEGIIFIGPPSTAIR	2	QEGIIFIGPPSTAIR2	36690.5	42716.3	43116.9
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	QEGIVEIYEDGTSHYLCLPR	QEGIVEIYEDGTSHYLC(UniMod:4)LPR	3	QEGIVEIYEDGTSHYLC(UniMod:4)LPR3	13015	10167.8	12851.5
A2VD12	A2VD12	PBIP1_RAT	Pbxip1	Pre-B-cell leukemia transcription factor-interacting protein 1	1	QEGLALFGVELAPVR	QEGLALFGVELAPVR	2	QEGLALFGVELAPVR2		4379.67	5743.82
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	QEGLFQENECIVK	QEGLFQENEC(UniMod:4)IVK	2	QEGLFQENEC(UniMod:4)IVK2			4975.59
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	QEGLMISASLLSEGYLQPASDLSK	QEGLMISASLLSEGYLQPASDLSK	3	QEGLMISASLLSEGYLQPASDLSK3		12155.6	11595
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	QEGSFLPR	QEGSFLPR	2	QEGSFLPR2	7266.82	9294.57	3614.65
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	QEGTVHTQVAGTWVSSR	QEGTVHTQVAGTWVSSR	3	QEGTVHTQVAGTWVSSR3	3509.15	6255.65	4829.87
P51792	P51792	CLCN3_RAT	Clcn3	H(+)/Cl(-) exchange transporter 3	1	QEGVVGSSR	QEGVVGSSR	2	QEGVVGSSR2	63635	60423.4	62384.9
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	QEHCGCYTLVVENK	QEHC(UniMod:4)GC(UniMod:4)YTLVVENK	2	QEHC(UniMod:4)GC(UniMod:4)YTLVVENK2	4407.09	5819.59	3177.95
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	QEHCGCYTLVVENK	QEHC(UniMod:4)GC(UniMod:4)YTLVVENK	3	QEHC(UniMod:4)GC(UniMod:4)YTLVVENK3	59741.8	70809.7	84346.7
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	QEHCTQLESHLK	QEHC(UniMod:4)TQLESHLK	3	QEHC(UniMod:4)TQLESHLK3	8803.65	8737.97	8759.59
A0A8I5ZUS1	A0A8I5ZUS1	A0A8I5ZUS1_RAT	Map3k4	Mitogen activated protein kinase kinase kinase 4	1	QEHMLGESAR	QEHMLGESAR	3	QEHMLGESAR3			14907.1
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	QEHSELTEQYK	QEHSELTEQYK	2	QEHSELTEQYK2	3889.73		1383.07
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	QEHSELTEQYK	QEHSELTEQYK	3	QEHSELTEQYK3	21264.8	23641.2	28863
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	QEHSEWDK	QEHSEWDK	2	QEHSEWDK2	21966.7	20540	21620.5
Q9EPI1	Q9EPI1	XYLT1_RAT	Xylt1	Xylosyltransferase 1 (Fragment)	1	QEIAETYCR	QEIAETYC(UniMod:4)R	2	QEIAETYC(UniMod:4)R2	1595.49	2933.09	
O35815	O35815	ATX3_RAT	Atxn3	Ataxin-3	1	QEIDMEDEEADLRR	QEIDMEDEEADLRR	3	QEIDMEDEEADLRR3	7926.41	9891.73	12355.4
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	QEIEAETDR	QEIEAETDR	2	QEIEAETDR2	13251.5	3959.34	13399
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	QEIESTNK	QEIESTNK	2	QEIESTNK2	4592.05		21523.2
D4A5K6	D4A5K6	D4A5K6_RAT	Zmpste24	CAAX prenyl protease	1	QEIEVMAK	QEIEVMAK	2	QEIEVMAK2	25790.4	29314.5	28301.4
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	QEIFQEQLAAVPEFQGLGPLFK	QEIFQEQLAAVPEFQGLGPLFK	3	QEIFQEQLAAVPEFQGLGPLFK3	17887.9	23641.6	35673.4
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	QEIGSETVTQDK	QEIGSETVTQDK	2	QEIGSETVTQDK2	6798.73	4248.75	5746.16
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	QEIIEQLLSNIFHK	QEIIEQLLSNIFHK	2	QEIIEQLLSNIFHK2		3399.01	
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	QEIIEQLLSNIFHK	QEIIEQLLSNIFHK	3	QEIIEQLLSNIFHK3		17348.6	46554.3
Q9QZ81	Q9QZ81	AGO2_RAT	Ago2	Protein argonaute-2	1	QEIIQDLAAMVR	QEIIQDLAAMVR	2	QEIIQDLAAMVR2	9706.78		4717.56
Q8K3R0	Q8K3R0;A0A0G2K1L3;D3ZP14	EST2A_RAT	Ces2a	Pyrethroid hydrolase Ces2a	0	QEILAINQVFK	QEILAINQVFK	2	QEILAINQVFK2	5455.75	2511.11	7383.77
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	QEILAVAR	QEILAVAR	2	QEILAVAR2	21234.1	13377.2	17791
D3Z840	D3Z840	D3Z840_RAT	Fanci	FA complementation group I	1	QEILEQVLNR	QEILEQVLNR	2	QEILEQVLNR2	14266.4	19738.3	13131.7
Q6ZXC8	Q6ZXC8	SIA8E_RAT	St8sia5	Alpha-2,8-sialyltransferase 8E	1	QEILEVK	QEILEVK	2	QEILEVK2	6227.35	4161.53	
Q9R010	Q9R010	CIB1_RAT	Cib1	Calcium and integrin-binding protein 1	1	QEILLAHR	QEILLAHR	2	QEILLAHR2	6397.79	5053.23	3866.96
G3V8D0	G3V8D0	G3V8D0_RAT	St8sia3	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	1	QEILQHVDVIK	QEILQHVDVIK	3	QEILQHVDVIK3	2444.74		3344.34
M0R9B9	M0R9B9	M0R9B9_RAT	AABR07034438.1	UBX domain protein 7	1	QEILVEPEPLFGAPK	QEILVEPEPLFGAPK	2	QEILVEPEPLFGAPK2		6820.2	
F1LP90	A0A0G2K490;F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	0	QEINMLK	QEINMLK	2	QEINMLK2	103393	91486	106203
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	QEINTLLEAK	QEINTLLEAK	2	QEINTLLEAK2	9802.91	12763.5	6337.89
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	QEIQHLFR	QEIQHLFR	2	QEIQHLFR2	16020.3	11011.8	9612.59
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	QEISIMNCLHHPK	QEISIMNC(UniMod:4)LHHPK	2	QEISIMNC(UniMod:4)LHHPK2	4465.5	2504.31	525.361
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	QEISIMNCLHHPK	QEISIMNC(UniMod:4)LHHPK	3	QEISIMNC(UniMod:4)LHHPK3	78530.5	55145.9	52464.7
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	QEISIMNCLHHPK	QEISIMNC(UniMod:4)LHHPK	4	QEISIMNC(UniMod:4)LHHPK4	180892	205145	135784
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	QEITDKDHTVSR	QEITDKDHTVSR	3	QEITDKDHTVSR3			3276.3
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	QEIVAEK	QEIVAEK	2	QEIVAEK2	52713.6	30253	49104.9
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	QEIVAEKEK	QEIVAEKEK	2	QEIVAEKEK2	3573.59	3541.15	1510.16
Q8R4A1	Q8R4A1	ERO1A_RAT	Ero1a	ERO1-like protein alpha	1	QEIVSLFNAFGR	QEIVSLFNAFGR	2	QEIVSLFNAFGR2	28310.7	31053.5	37839.9
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	QEKDKDDLGPDR	QEKDKDDLGPDR	2	QEKDKDDLGPDR2	1880.85		
Q63493	Q63493	CD1D_RAT	Cd1d	Antigen-presenting glycoprotein CD1d	1	QEKPVAWLSR	QEKPVAWLSR	3	QEKPVAWLSR3	92769.5	85847.6	86568.7
D3ZE26	D3ZH14;D3ZE26	D3ZE26_RAT	Tmcc2	Transmembrane and coiled-coil domain family 2	0	QELASMEEK	QELASMEEK	2	QELASMEEK2	45511.5	42487.4	27048.3
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	QELAVFCSPEPPAK	QELAVFC(UniMod:4)SPEPPAK	2	QELAVFC(UniMod:4)SPEPPAK2	1.92817e+06	1.70288e+06	1.97095e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	QELAVFCSPEPPAK	QELAVFC(UniMod:4)SPEPPAK	3	QELAVFC(UniMod:4)SPEPPAK3	236030	235457	223772
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	QELDAFLAQALSPK	QELDAFLAQALSPK	2	QELDAFLAQALSPK2	9095.07	3711.06	8084.76
A0A8I5ZS69	A0A8I5ZS69;F1LU14	A0A8I5ZS69_RAT	Snx6	Sorting nexin	0	QELEAEYLAIFK	QELEAEYLAIFK	2	QELEAEYLAIFK2	19649.8	25966.9	17970.7
A0A8I5ZS69	A0A8I5ZS69;F1LU14	A0A8I5ZS69_RAT	Snx6	Sorting nexin	0	QELEAEYLAIFKK	QELEAEYLAIFKK	3	QELEAEYLAIFKK3	7066.84	8717.39	7168.28
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	QELEAEYLAVFK	QELEAEYLAVFK	2	QELEAEYLAVFK2	10824.8	9866.87	9597.18
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	QELEAEYLAVFKK	QELEAEYLAVFKK	3	QELEAEYLAVFKK3	8502.47	5642.13	12541.3
B1H219	B1H219	B1H219_RAT	Dkk3	Dickkopf WNT signaling pathway inhibitor 3	1	QELEDLER	QELEDLER	2	QELEDLER2	778418	788453	831760
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	QELEDTK	QELEDTK	1	QELEDTK1	8027.19	10329.6	11449.4
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	QELEDTK	QELEDTK	2	QELEDTK2	218101	149309	244408
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QELEEICHDLEAR	QELEEIC(UniMod:4)HDLEAR	2	QELEEIC(UniMod:4)HDLEAR2	391821	442431	412962
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QELEEICHDLEAR	QELEEIC(UniMod:4)HDLEAR	3	QELEEIC(UniMod:4)HDLEAR3	6.05836e+06	7.71039e+06	6.89631e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QELEEICHDLEARVEEEEER	QELEEIC(UniMod:4)HDLEARVEEEEER	3	QELEEIC(UniMod:4)HDLEARVEEEEER3	8860.57		
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QELEEICHDLEARVEEEEER	QELEEIC(UniMod:4)HDLEARVEEEEER	4	QELEEIC(UniMod:4)HDLEARVEEEEER4	5970.12	12489.9	6877.15
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	QELEQTQNELTR	QELEQTQNELTR	2	QELEQTQNELTR2	7520.77	9220.47	6797
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	QELEREEGALASK	QELEREEGALASK	3	QELEREEGALASK3	65661.1	66350.4	75380.3
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	QELESSQLK	QELESSQLK	2	QELESSQLK2	23397.3	27138.9	27872.8
Q6MGC4	Q6MGC4;A0A8I6GI92	Q6MGC4_RAT	Pfdn6	Prefoldin subunit 6	0	QELGEAR	QELGEAR	2	QELGEAR2	59998.8	86464.7	
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	QELGGLGISIK	QELGGLGISIK	2	QELGGLGISIK2	59028.9	55222.8	51713.1
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	QELGICPAVK	QELGIC(UniMod:4)PAVK	2	QELGIC(UniMod:4)PAVK2	8798.08	10431.7	15626.2
D3ZUY0	D3ZUY0	D3ZUY0_RAT	Rdh14	Retinol dehydrogenase 14	1	QELGQAGGLGPDATDGQLVVK	QELGQAGGLGPDATDGQLVVK	3	QELGQAGGLGPDATDGQLVVK3	1167.78	6065.67	1486.82
Q8CHI9	Q8CHI9	CHSTF_RAT	Chst15	Carbohydrate sulfotransferase 15	1	QELHMFSVIPNK	QELHMFSVIPNK	3	QELHMFSVIPNK3	9035.47	6335.46	6447.54
A0A8I5ZS69	A0A8I5ZS69	A0A8I5ZS69_RAT	Snx6	Sorting nexin	1	QELIDFK	QELIDFK	2	QELIDFK2	59014.1	59200.1	53683.4
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	QELIDLR	QELIDLR	2	QELIDLR2	22899.8	17323.9	13870.8
Q66HA4	Q66HA4	TAXB1_RAT	Tax1bp1	Tax1-binding protein 1 homolog	1	QELIFLAK	QELIFLAK	2	QELIFLAK2	5697.08	8730.89	9654.03
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	QELILSNSEDK	QELILSNSEDK	2	QELILSNSEDK2	171474	170790	162334
A0A8I6A263	A0A8I6A263	A0A8I6A263_RAT	Aimp1	Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	1	QELIQAEIHNGVK	QELIQAEIHNGVK	3	QELIQAEIHNGVK3	12236.4		12860.9
P97694	P97694	CYH1_RAT	Cyth1	Cytohesin-1	1	QELLADIQR	QELLADIQR	2	QELLADIQR2	17224.5	20021	29526.4
O35854	O35854	BCAT2_RAT	Bcat2	Branched-chain-amino-acid aminotransferase, mitochondrial	1	QELLECIR	QELLEC(UniMod:4)IR	2	QELLEC(UniMod:4)IR2	19155.6	15340.8	15474.6
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	QELLEEEEEEAEEVGLLLQAGK	QELLEEEEEEAEEVGLLLQAGK	3	QELLEEEEEEAEEVGLLLQAGK3	26523.4	29768.6	22925
Q5XIK7	Q5XIK7	KATL1_RAT	Katnal1	Katanin p60 ATPase-containing subunit A-like 1	1	QELLEEYEQVK	QELLEEYEQVK	2	QELLEEYEQVK2	1488.73		
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	QELLEYMR	QELLEYMR	2	QELLEYMR2	39053.8	42583.9	35798.7
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	QELLGWLAEK	QELLGWLAEK	2	QELLGWLAEK2	97594.6	90225.9	98157.4
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	QELLTQR	QELLTQR	2	QELLTQR2	13573.3	12564.8	14128.7
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	QELNDSLQVAER	QELNDSLQVAER	2	QELNDSLQVAER2	17530.1	14760.5	17132.2
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	QELNEPPK	QELNEPPK	2	QELNEPPK2	102222	100425	99517.7
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	QELNGNTK	QELNGNTK	1	QELNGNTK1			5426.6
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	QELNGNTK	QELNGNTK	2	QELNGNTK2			19156.4
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QELPPPPPPK	QELPPPPPPK	2	QELPPPPPPK2	63380.7	56704.6	57369.4
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QELPPPPPPKK	QELPPPPPPKK	3	QELPPPPPPKK3	21116	34269.1	31588.8
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	QELQDISCK	QELQDISC(UniMod:4)K	2	QELQDISC(UniMod:4)K2	9186.9	12595	5860.57
D4A5Z0	A0A8I6AML2;D4A5Z0	D4A5Z0_RAT	Csgalnact2	Hexosyltransferase	0	QELQDMSEK	QELQDMSEK	2	QELQDMSEK2	2577.88	7367.99	3501.19
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	QELQEAQER	QELQEAQER	2	QELQEAQER2	54339.8	48617.8	48121.7
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	QELQKPDGFQSLTPTFAGVLVHIDNLR	QELQKPDGFQSLTPTFAGVLVHIDNLR	4	QELQKPDGFQSLTPTFAGVLVHIDNLR4	5001.38	9250.06	5437.8
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	QELQNSGLTEEETR	QELQNSGLTEEETR	2	QELQNSGLTEEETR2	50584	45400.4	49006
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	QELQNSGLTEEETR	QELQNSGLTEEETR	3	QELQNSGLTEEETR3		2568.48	
D3ZCK4	D3ZCK4	D3ZCK4_RAT	Def6	DEF6 guanine nucleotide exchange factor	1	QELQQEMALQSR	QELQQEMALQSR	2	QELQQEMALQSR2	1734.51	5254.85	3183.07
G3V8Y8	G3V8Y8	G3V8Y8_RAT	Hip1	Huntingtin interacting protein 1	1	QELQVLHGNLETSAQSEAK	QELQVLHGNLETSAQSEAK	3	QELQVLHGNLETSAQSEAK3	1930.5	4923.27	
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	QELQVLSER	QELQVLSER	2	QELQVLSER2	45688.4	38491.3	54046
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	QELSALK	QELSALK	1	QELSALK1	1351.74	1303.75	
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	QELSALK	QELSALK	2	QELSALK2	287118	305959	286739
Q9JMJ4	Q9JMJ4	PRP19_RAT	Prpf19	Pre-mRNA-processing factor 19	1	QELSHALYQHDAACR	QELSHALYQHDAAC(UniMod:4)R	3	QELSHALYQHDAAC(UniMod:4)R3	585.921		
Q9JMJ4	Q9JMJ4	PRP19_RAT	Prpf19	Pre-mRNA-processing factor 19	1	QELSHALYQHDAACR	QELSHALYQHDAAC(UniMod:4)R	4	QELSHALYQHDAAC(UniMod:4)R4	8508.27		
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	QELSPSHSLSSNK	QELSPSHSLSSNK	3	QELSPSHSLSSNK3	15043.2	21540.7	20461.3
Q6P6S5	Q6P6S5	GET1_RAT	Get1	Guided entry of tail-anchored proteins factor 1	1	QELSTVNMMDEFAR	QELSTVNMMDEFAR	2	QELSTVNMMDEFAR2	5889.48	7593.55	5240.63
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	QELTEKDATIASLEETNR	QELTEKDATIASLEETNR	3	QELTEKDATIASLEETNR3	3036.71	1896.75	3131.89
P0C8E4	P0C8E4	M3K7_RAT	Map3k7	Mitogen-activated protein kinase kinase kinase 7	1	QELVAELDQDEKDQQNTSR	QELVAELDQDEKDQQNTSR	3	QELVAELDQDEKDQQNTSR3	14048.2	12971.5	16230
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	QELVEEVR	QELVEEVR	2	QELVEEVR2	102050	81771.7	84544.5
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	QELVEEVRK	QELVEEVRK	2	QELVEEVRK2	35637.9	23906.6	22782.6
D4ACD2	D4ACD2	D4ACD2_RAT	Bach1	BTB domain and CNC homolog 1	1	QELVQESQPTTTATPEQATLLEPCR	QELVQESQPTTTATPEQATLLEPC(UniMod:4)R	3	QELVQESQPTTTATPEQATLLEPC(UniMod:4)R3	3722.32	5186.55	3076.83
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	QEMALTCEK	QEMALTC(UniMod:4)EK	2	QEMALTC(UniMod:4)EK2	51662.4	41226.5	37138.6
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	QEMALTCEKPLK	QEMALTC(UniMod:4)EKPLK	2	QEMALTC(UniMod:4)EKPLK2	76037.4	49818.7	65501.5
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	QEMALTCEKPLK	QEMALTC(UniMod:4)EKPLK	3	QEMALTC(UniMod:4)EKPLK3	1.33504e+06	1.45923e+06	1.51359e+06
Q80Z30	Q80Z30	PPM1E_RAT	Ppm1e	Protein phosphatase 1E	1	QEMFPHDPAEALCR	QEMFPHDPAEALC(UniMod:4)R	3	QEMFPHDPAEALC(UniMod:4)R3	17355.5	10498.4	29685.7
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	QEMIAIHSVNLLLK	QEMIAIHSVNLLLK	3	QEMIAIHSVNLLLK3	1936.17		2263.98
A0A8I5ZQ24	A0A8I5ZQ24	A0A8I5ZQ24_RAT	Atp6v1h	V-type proton ATPase subunit H	1	QEMLQTEGSQCAK	QEMLQTEGSQC(UniMod:4)AK	2	QEMLQTEGSQC(UniMod:4)AK2	6430.59	5983.89	4794.17
A7VJC2	A7VJC2	ROA2_RAT	Hnrnpa2b1	Heterogeneous nuclear ribonucleoproteins A2/B1	1	QEMQEVQSSR	QEMQEVQSSR	2	QEMQEVQSSR2	2085.66	3050.55	2961.61
F1LU27	F1LU27	F1LU27_RAT	Focad	Focadhesin	1	QEMVNMPR	QEMVNMPR	2	QEMVNMPR2	7337.5	9663.89	9946.29
D4A584	D4A584	D4A584_RAT	Fes	Tyrosine-protein kinase	1	QEMVSQLQR	QEMVSQLQR	2	QEMVSQLQR2	4566.9	1786.85	
P86182	P86182	CCD22_RAT	Ccdc22	Coiled-coil domain-containing protein 22	1	QENAGLLGR	QENAGLLGR	2	QENAGLLGR2	8120.07	3624.44	11375.2
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	QENDVINAILK	QENDVINAILK	2	QENDVINAILK2	7797.17	4885.76	4335.4
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	QENGASVILR	QENGASVILR	2	QENGASVILR2	37903.8	36421.9	40464.2
F1LUG5	F1LUG5	F1LUG5_RAT	Tmem94	Transmembrane protein 94	1	QENHLALYR	QENHLALYR	3	QENHLALYR3	4581.15	6070.24	5188.62
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	QENLSWQHELHQLR	QENLSWQHELHQLR	4	QENLSWQHELHQLR4	11103.5	6370.31	8472.14
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	QENNHLMEMK	QENNHLMEMK	2	QENNHLMEMK2	4303.3	3121.69	2596.49
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	QENNHLMEMK	QENNHLMEMK	3	QENNHLMEMK3	30909.6	34239	44382.9
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	QENTAILQQLLPLR	QENTAILQQLLPLR	2	QENTAILQQLLPLR2	22655.8	17965.5	21526
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	QENTAILQQLLPLR	QENTAILQQLLPLR	3	QENTAILQQLLPLR3	3991.25	3216.1	
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	QEPDITITEWK	QEPDITITEWK	2	QEPDITITEWK2	12141.5	10512.2	15000.1
P02770	P02770	ALBU_RAT	Alb	Albumin	1	QEPERNECFLQHK	QEPERNEC(UniMod:4)FLQHK	2	QEPERNEC(UniMod:4)FLQHK2	21502.9	19404	8882.26
P02770	P02770	ALBU_RAT	Alb	Albumin	1	QEPERNECFLQHK	QEPERNEC(UniMod:4)FLQHK	3	QEPERNEC(UniMod:4)FLQHK3	135593	111506	146413
P02770	P02770	ALBU_RAT	Alb	Albumin	1	QEPERNECFLQHK	QEPERNEC(UniMod:4)FLQHK	4	QEPERNEC(UniMod:4)FLQHK4	280534	349446	181300
P23764	P23764	GPX3_RAT	Gpx3	Glutathione peroxidase 3	1	QEPGENSEILPSLK	QEPGENSEILPSLK	2	QEPGENSEILPSLK2	131919	136557	132048
P23764	P23764	GPX3_RAT	Gpx3	Glutathione peroxidase 3	1	QEPGENSEILPSLK	QEPGENSEILPSLK	3	QEPGENSEILPSLK3	407275	454868	469355
P36970	P36970	GPX4_RAT	Gpx4	Phospholipid hydroperoxide glutathione peroxidase	1	QEPGSNQEIK	QEPGSNQEIK	2	QEPGSNQEIK2	50998.2	66733.7	
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	QEPNLQVDHMNLLK	QEPNLQVDHMNLLK	2	QEPNLQVDHMNLLK2	10494.3	11507.1	
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	QEPNLQVDHMNLLK	QEPNLQVDHMNLLK	3	QEPNLQVDHMNLLK3	51246.9	52361.6	44218.3
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	QEPPEMELLK	QEPPEMELLK	2	QEPPEMELLK2	71103	73584.9	86203.6
Q9WUD2	Q9WUD2	TRPV2_RAT	Trpv2	Transient receptor potential cation channel subfamily V member 2	1	QEPPPMESPFQR	QEPPPMESPFQR	2	QEPPPMESPFQR2	35066.9	22066.2	32726.8
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	QEPPPPPPCR	QEPPPPPPC(UniMod:4)R	2	QEPPPPPPC(UniMod:4)R2	59321.3	54654.6	61658.1
P61589	P61589	RHOA_RAT	Rhoa	Transforming protein RhoA	1	QEPVKPEEGR	QEPVKPEEGR	2	QEPVKPEEGR2	40349.7		163144
P61589	P61589	RHOA_RAT	Rhoa	Transforming protein RhoA	1	QEPVKPEEGR	QEPVKPEEGR	3	QEPVKPEEGR3			245222
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	QEQANNPFYIK	QEQANNPFYIK	2	QEQANNPFYIK2	23023.5	44262.2	35729.1
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	QEQEDYQEMLQSLAQRPAPANTNR	QEQEDYQEMLQSLAQRPAPANTNR	3	QEQEDYQEMLQSLAQRPAPANTNR3	2919.52	4443.3	7586.14
A0A8I6G6W8	A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	QEQHEEEKAPEVSPAQPK	QEQHEEEKAPEVSPAQPK	4	QEQHEEEKAPEVSPAQPK4	6571.78	6335.41	9437.31
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	QEQLAAIYAVLDHLPEANHTSLER	QEQLAAIYAVLDHLPEANHTSLER	4	QEQLAAIYAVLDHLPEANHTSLER4	13067.6	9372.96	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QEQLELTLGR	QEQLELTLGR	2	QEQLELTLGR2	7446.08	8431.17	10227.4
D3ZTP3	D3ZTP3	D3ZTP3_RAT	Tmem59	Transmembrane protein 59	1	QEQLMSLMPR	QEQLMSLMPR	2	QEQLMSLMPR2	11375.6	40634.2	
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	QEQLVCPGNPGQLGLDDR	QEQLVC(UniMod:4)PGNPGQLGLDDR	3	QEQLVC(UniMod:4)PGNPGQLGLDDR3	26119.9	12813.4	23770.7
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	QEQRPLEK	QEQRPLEK	2	QEQRPLEK2			16645
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	QEQSSTEIPLQAESDQAAEEEAK	QEQSSTEIPLQAESDQAAEEEAK	3	QEQSSTEIPLQAESDQAAEEEAK3	5500.71	2390.38	5239.48
Q9QXY4	Q9QXY4	OGFR_RAT	Ogfr	Opioid growth factor receptor	1	QEQVPGEADPQGVSEVEK	QEQVPGEADPQGVSEVEK	2	QEQVPGEADPQGVSEVEK2	25160.7	23259	24004.2
Q9QXY4	Q9QXY4	OGFR_RAT	Ogfr	Opioid growth factor receptor	1	QEQVPGEADPQGVSEVEK	QEQVPGEADPQGVSEVEK	3	QEQVPGEADPQGVSEVEK3	3457.77	6619.74	4967.34
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	QERDYLVSLQHQR	QERDYLVSLQHQR	4	QERDYLVSLQHQR4	19706.7	32102.1	25888.8
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	QEREPVGTCFLQDGTK	QEREPVGTC(UniMod:4)FLQDGTK	2	QEREPVGTC(UniMod:4)FLQDGTK2	4250.4	6006.79	5386.92
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	QEREPVGTCFLQDGTK	QEREPVGTC(UniMod:4)FLQDGTK	3	QEREPVGTC(UniMod:4)FLQDGTK3	125177	168086	147732
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	QERETETFDMESLR	QERETETFDMESLR	3	QERETETFDMESLR3	7957.14	12338.2	7106.71
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	QERPPDYQHSAQVK	QERPPDYQHSAQVK	3	QERPPDYQHSAQVK3	8372.56	5024.68	5951.09
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	QERPPDYQHSAQVK	QERPPDYQHSAQVK	4	QERPPDYQHSAQVK4	25824.1	33156.5	20925.2
Q924C3	Q924C3	ENPP1_RAT	Enpp1	Ectonucleotide pyrophosphatase/phosphodiesterase family member 1	1	QESAWVEELLALHR	QESAWVEELLALHR	3	QESAWVEELLALHR3	4405.95	8464.71	5275.97
P24594	P24594	IBP5_RAT	Igfbp5	Insulin-like growth factor-binding protein 5	1	QESDQGPCR	QESDQGPC(UniMod:4)R	2	QESDQGPC(UniMod:4)R2			16416
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	QESDQLVLNQHPASDK	QESDQLVLNQHPASDK	3	QESDQLVLNQHPASDK3	20821.9	14279.1	15061.2
G3V9L1	G3V9L1	G3V9L1_RAT	Tex2	Testis expressed 2	1	QESDSVSYK	QESDSVSYK	2	QESDSVSYK2	5848.12	4610.55	
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	QESDYEILER	QESDYEILER	2	QESDYEILER2	19434	22897.1	29268
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	QESEGSDLLENQIK	QESEGSDLLENQIK	2	QESEGSDLLENQIK2	4016.5	2047.2	5960.85
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	QESEGSDLLENQIKK	QESEGSDLLENQIKK	3	QESEGSDLLENQIKK3	3946		6955.84
Q6Y1S1	Q6Y1S1	MYD88_RAT	Myd88	Myeloid differentiation primary response protein MyD88	1	QESEKPLQVAR	QESEKPLQVAR	3	QESEKPLQVAR3	14919	13440.7	13228.6
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	QESESWSPEACLGVK	QESESWSPEAC(UniMod:4)LGVK	2	QESESWSPEAC(UniMod:4)LGVK2	17517.5	15638.3	11928.5
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	QESIAVR	QESIAVR	2	QESIAVR2	50986	40773.1	62682.2
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	QESLLSR	QESLLSR	2	QESLLSR2	27851.3	24831.5	21923.9
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	QESLPHAGPIIVHCSAGIGR	QESLPHAGPIIVHC(UniMod:4)SAGIGR	4	QESLPHAGPIIVHC(UniMod:4)SAGIGR4	27534.7	15197.1	18833.3
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QESLQTVLSR	QESLQTVLSR	2	QESLQTVLSR2	33774.3	27958.1	38626.6
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	QESTEEMFHR	QESTEEMFHR	3	QESTEEMFHR3	9591.51	13408.8	6561.56
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	QESTFFTLTFVPHGYTEVASVPVAR	QESTFFTLTFVPHGYTEVASVPVAR	3	QESTFFTLTFVPHGYTEVASVPVAR3	7246.25	11380.2	4091.59
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	QETAINIGHSCR	QETAINIGHSC(UniMod:4)R	2	QETAINIGHSC(UniMod:4)R2	2172.67	3586.81	
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	QETAINIGHSCR	QETAINIGHSC(UniMod:4)R	3	QETAINIGHSC(UniMod:4)R3	40875.2	36499	44136.5
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	QETAPDTGDQQR	QETAPDTGDQQR	2	QETAPDTGDQQR2	8370.6		4762.18
Q9QYF3	Q9QYF3	MYO5A_RAT	Myo5a	Unconventional myosin-Va	1	QETEQLVSNLKEENTLLK	QETEQLVSNLKEENTLLK	3	QETEQLVSNLKEENTLLK3	2682.82	1584.28	
P09527	P09527	RAB7A_RAT	Rab7a	Ras-related protein Rab-7a	1	QETEVELYNEFPEPIK	QETEVELYNEFPEPIK	3	QETEVELYNEFPEPIK3	91399.5	71912.5	99581.5
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	QETFDAGLQAFQQEGIANITALK	QETFDAGLQAFQQEGIANITALK	3	QETFDAGLQAFQQEGIANITALK3	59730.6	75941.2	91635.4
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	QETFDAGLQAFQQEGIANITALKDQLLAAK	QETFDAGLQAFQQEGIANITALKDQLLAAK	4	QETFDAGLQAFQQEGIANITALKDQLLAAK4	2699.55	7822.15	2393.2
Q498T9	Q498T9	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	1	QETGIDDIPDVK	QETGIDDIPDVK	2	QETGIDDIPDVK2	9121.4	8315.67	
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	QETLDGHMVVR	QETLDGHMVVR	2	QETLDGHMVVR2	5514.84	2581.55	4402.56
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	QETLDGHMVVR	QETLDGHMVVR	3	QETLDGHMVVR3	96233	105560	96591.5
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	QETSLTSHDLFDIDPVVAR	QETSLTSHDLFDIDPVVAR	3	QETSLTSHDLFDIDPVVAR3	6941.04	11988.3	
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	QETSSLACCLR	QETSSLAC(UniMod:4)C(UniMod:4)LR	2	QETSSLAC(UniMod:4)C(UniMod:4)LR2	2618.61	4868.01	5967.91
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	QETSSLACGLR	QETSSLAC(UniMod:4)GLR	2	QETSSLAC(UniMod:4)GLR2	13703.2	10328.2	16524.3
P11730	P11730	KCC2G_RAT	Camk2g	Calcium/calmodulin-dependent protein kinase type II subunit gamma	1	QETVECLR	QETVEC(UniMod:4)LR	2	QETVEC(UniMod:4)LR2	27163.1	20216.1	31467.2
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	QETYLVSK	QETYLVSK	2	QETYLVSK2	2427.75	2924.32	2942.82
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	QEVAVFVFDK	QEVAVFVFDK	2	QEVAVFVFDK2	10342.8	10766.4	9321.66
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	QEVAVFVFDKK	QEVAVFVFDKK	3	QEVAVFVFDKK3	10346.4	8773.1	6249.44
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	QEVAYIGITSSDVVWETKPK	QEVAYIGITSSDVVWETKPK	3	QEVAYIGITSSDVVWETKPK3	12729.2	10025.2	6625.44
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	QEVDALR	QEVDALR	2	QEVDALR2	15320.6	23280.8	19203.1
Q66H84	Q66H84	MAPK3_RAT	Mapkapk3	MAP kinase-activated protein kinase 3	1	QEVDHHWQASGGPHIVR	QEVDHHWQASGGPHIVR	4	QEVDHHWQASGGPHIVR4	6260.66		6699.93
D3ZZL9	D3ZZL9	GCC2_RAT	Gcc2	GRIP and coiled-coil domain-containing protein 2	1	QEVEDSVTK	QEVEDSVTK	2	QEVEDSVTK2	3056.89		3705.25
D4A1Y5	D4A1Y5	D4A1Y5_RAT	Mthfd2	methenyltetrahydrofolate cyclohydrolase	1	QEVEEWVASGNK	QEVEEWVASGNK	2	QEVEEWVASGNK2	11060.7	12507.2	11729.7
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	QEVENFK	QEVENFK	2	QEVENFK2	5229.93		
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	QEVIDIK	QEVIDIK	2	QEVIDIK2	15326.1	9909.27	11174.2
P63245	P63245	RACK1_RAT	Rack1	Small ribosomal subunit protein RACK1	1	QEVISTSSK	QEVISTSSK	2	QEVISTSSK2	21632.5	25425	22035.3
A0A0G2K1Q8	A0A0G2K1Q8	ABCA3_RAT	Abca3	Phospholipid-transporting ATPase ABCA3	1	QEVLEEFK	QEVLEEFK	2	QEVLEEFK2	2939.2	2276.3	
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	QEVLGQLR	QEVLGQLR	2	QEVLGQLR2	19544.7	22761.3	21257.9
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	QEVLHWLNEEK	QEVLHWLNEEK	3	QEVLHWLNEEK3	5779.1	4825.84	1457.99
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	QEVLQAFK	QEVLQAFK	2	QEVLQAFK2	17329.3	16314.7	12983.7
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	QEVLQNLLK	QEVLQNLLK	2	QEVLQNLLK2	14880	9868.1	13422.5
B5DEP5	B5DEP5	B5DEP5_RAT	Trip4	Thyroid hormone receptor interactor 4	1	QEVPAFPEPDVTVEVK	QEVPAFPEPDVTVEVK	2	QEVPAFPEPDVTVEVK2	7559.63	7742.97	9476.98
D4ADE8	D4ADE8;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	QEVPSWLENMAFEHHYK	QEVPSWLENMAFEHHYK	4	QEVPSWLENMAFEHHYK4	22694.2	20451.6	19629.1
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	QEVQAWDGEVR	QEVQAWDGEVR	2	QEVQAWDGEVR2	89013.4	104356	82018.3
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	QEVQDLQASLK	QEVQDLQASLK	2	QEVQDLQASLK2	9159.39	14255.6	10575.8
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	QEVQGDGPFLDGINVTIR	QEVQGDGPFLDGINVTIR	2	QEVQGDGPFLDGINVTIR2	6160.52	6149.5	2555.99
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	QEVQGDGPFLDGINVTIR	QEVQGDGPFLDGINVTIR	3	QEVQGDGPFLDGINVTIR3	6073.71	6146.01	6741.36
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	QEVSQEPPDTTDGCK	QEVSQEPPDTTDGC(UniMod:4)K	2	QEVSQEPPDTTDGC(UniMod:4)K2	83185.6	49931.3	72946.1
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	QEVSQLNK	QEVSQLNK	2	QEVSQLNK2	2096		
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	QEVSYVGVTSSGVVWEMKPK	QEVSYVGVTSSGVVWEMKPK	3	QEVSYVGVTSSGVVWEMKPK3	3307.85	5323.24	
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	QEVTALER	QEVTALER	2	QEVTALER2	36198.8	35835.8	35461.7
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	QEVVTEVIPMLEVR	QEVVTEVIPMLEVR	2	QEVVTEVIPMLEVR2	30257.1	30621.8	36468.1
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	QEVVTEVIPMLEVR	QEVVTEVIPMLEVR	3	QEVVTEVIPMLEVR3	15727.2	13582.1	16807.5
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	QEWESAGQQAPHPR	QEWESAGQQAPHPR	2	QEWESAGQQAPHPR2	1657.27	2808.28	
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	QEWESAGQQAPHPR	QEWESAGQQAPHPR	3	QEWESAGQQAPHPR3	108162	91057.3	88548.9
D3ZEE4	D3ZEE4	D3ZEE4_RAT	Plxdc1	Plexin domain containing 1	1	QEWLTYGCAQEAEGK	QEWLTYGC(UniMod:4)AQEAEGK	2	QEWLTYGC(UniMod:4)AQEAEGK2	7976.57	6582.65	3110.85
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	QEYAATTSR	QEYAATTSR	2	QEYAATTSR2	9263.59	6593.89	6949.38
A0A8I5ZQ24	A0A8I5ZQ24	A0A8I5ZQ24_RAT	Atp6v1h	V-type proton ATPase subunit H	1	QEYALAMIQCK	QEYALAMIQC(UniMod:4)K	2	QEYALAMIQC(UniMod:4)K2	9852.77	4565.91	5993.91
P68136	P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	QEYDEAGPSIVHR	QEYDEAGPSIVHR	2	QEYDEAGPSIVHR2	14279.1	13641.9	
P68136	P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	QEYDEAGPSIVHR	QEYDEAGPSIVHR	3	QEYDEAGPSIVHR3	21909.9	23467.4	12283.7
P60711	P60711;P63259	ACTB_RAT	Actb	Actin, cytoplasmic 1	0	QEYDESGPSIVHR	QEYDESGPSIVHR	2	QEYDESGPSIVHR2	1.78079e+06	1.46181e+06	1.39457e+06
P60711	P60711;P63259	ACTB_RAT	Actb	Actin, cytoplasmic 1	0	QEYDESGPSIVHR	QEYDESGPSIVHR	3	QEYDESGPSIVHR3	12612.5	11008.6	12892.6
P60711	P60711;P63259	ACTB_RAT	Actb	Actin, cytoplasmic 1	0	QEYDESGPSIVHRK	QEYDESGPSIVHRK	2	QEYDESGPSIVHRK2	23591.6	20920.4	21353.2
P60711	P60711;P63259	ACTB_RAT	Actb	Actin, cytoplasmic 1	0	QEYDESGPSIVHRK	QEYDESGPSIVHRK	3	QEYDESGPSIVHRK3	615120	548858	641002
P60711	P60711;P63259	ACTB_RAT	Actb	Actin, cytoplasmic 1	0	QEYDESGPSIVHRK	QEYDESGPSIVHRK	4	QEYDESGPSIVHRK4	967437	1.20413e+06	1.63276e+06
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	QEYEHSICINGR	QEYEHSIC(UniMod:4)INGR	2	QEYEHSIC(UniMod:4)INGR2	5126.96	3148.88	3359.58
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	QEYEHSICINGR	QEYEHSIC(UniMod:4)INGR	3	QEYEHSIC(UniMod:4)INGR3	74709.3	74770.3	67700
P09812	P53534;P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	0	QEYFVVAATLQDIIR	QEYFVVAATLQDIIR	2	QEYFVVAATLQDIIR2	4593.37	3401.21	1107.17
P09812	P53534;P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	0	QEYFVVAATLQDIIR	QEYFVVAATLQDIIR	3	QEYFVVAATLQDIIR3	3446.46	1871.69	3882.21
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	QEYFVVAATLQDVIR	QEYFVVAATLQDVIR	2	QEYFVVAATLQDVIR2	7630.58	12255.5	10764.5
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	QEYFVVAATLQDVIR	QEYFVVAATLQDVIR	3	QEYFVVAATLQDVIR3	10634.8	11843.8	7563.43
Q641X8	Q641X8	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	1	QEYLDTLYR	QEYLDTLYR	2	QEYLDTLYR2	91019.2	99263.4	76685.1
D4A9N5	D4A9N5	D4A9N5_RAT	Trim25	Tripartite motif-containing 25	1	QEYLEMK	QEYLEMK	2	QEYLEMK2			890.283
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	QEYLEVQR	QEYLEVQR	2	QEYLEVQR2	13223.7	10607.3	18491.8
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	QEYQQAVQQLEQK	QEYQQAVQQLEQK	2	QEYQQAVQQLEQK2	32385.1	30442.2	33012.6
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	QEYQQAVQQLEQK	QEYQQAVQQLEQK	3	QEYQQAVQQLEQK3	27810	24580.5	29491.9
A0A0G2K059	A0A0G2K059	A0A0G2K059_RAT	Mcu	Calcium uniporter protein	1	QEYVYPEAR	QEYVYPEAR	2	QEYVYPEAR2	61924.8	46695.6	61870.5
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	QFAAATIQTIGR	QFAAATIQTIGR	2	QFAAATIQTIGR2	99007.9	138449	116602
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	QFAAIHK	QFAAIHK	2	QFAAIHK2	10324.2	10908.8	12496.2
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	QFAALVASK	QFAALVASK	2	QFAALVASK2	73011.1	62398	62692.3
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	QFAAQEEK	QFAAQEEK	1	QFAAQEEK1	2099.88		
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	QFAAQEEK	QFAAQEEK	2	QFAAQEEK2	76443.2	68116.6	61071.9
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	QFAAQEEKR	QFAAQEEKR	2	QFAAQEEKR2	9859.7		9601.38
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	QFAAVLTR	QFAAVLTR	2	QFAAVLTR2	23968.3	30720.2	20520.9
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	QFAEENGLLFLEASAK	QFAEENGLLFLEASAK	2	QFAEENGLLFLEASAK2	8995.9	6190.9	11924.9
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	QFAEENGLLFLEASAK	QFAEENGLLFLEASAK	3	QFAEENGLLFLEASAK3	7555.19		7115.51
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	QFAEGSTLK	QFAEGSTLK	2	QFAEGSTLK2	23511.1	28218	
A0A0G2JXI6	A0A0G2JXI6	A0A0G2JXI6_RAT	Cyrib	CYFIP related Rac1 interactor B	1	QFAEILHFTLR	QFAEILHFTLR	3	QFAEILHFTLR3	8690.19	10280.4	4692.82
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	QFAEMYVAK	QFAEMYVAK	2	QFAEMYVAK2	31299.2	36768.4	46787.4
Q63369	Q63369	NFKB1_RAT	Nfkb1	Nuclear factor NF-kappa-B p105 subunit	1	QFAIVFK	QFAIVFK	2	QFAIVFK2	12854.3	7551.4	6986.94
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	QFAPEYEK	QFAPEYEK	2	QFAPEYEK2	300077	344550	351990
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	QFAPIHAEAPEFIEMSVEQEILVTGIK	QFAPIHAEAPEFIEMSVEQEILVTGIK	4	QFAPIHAEAPEFIEMSVEQEILVTGIK4	23145.8	22331.7	18531.1
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	QFASQANMVGPWIQTK	QFASQANMVGPWIQTK	2	QFASQANMVGPWIQTK2	138718	153356	145539
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	QFASQANMVGPWIQTK	QFASQANMVGPWIQTK	3	QFASQANMVGPWIQTK3	56317.4	67646.2	66664
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	QFAYQCSWGLTTR	QFAYQC(UniMod:4)SWGLTTR	2	QFAYQC(UniMod:4)SWGLTTR2	7531.42	4956.42	11012
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	QFCFNCGENWHDPVK	QFC(UniMod:4)FNC(UniMod:4)GENWHDPVK	2	QFC(UniMod:4)FNC(UniMod:4)GENWHDPVK2	2894.83	2236.31	
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	QFCFNCGENWHDPVK	QFC(UniMod:4)FNC(UniMod:4)GENWHDPVK	3	QFC(UniMod:4)FNC(UniMod:4)GENWHDPVK3	40081	45219.8	49073.8
P63219	A0A8I6AA28;P63219;F2Z3T8	GBG5_RAT	Gng5	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5	0	QFCLQNAQHDPLLTGVSSSTNPFRPQK	QFC(UniMod:4)LQNAQHDPLLTGVSSSTNPFRPQK	4	QFC(UniMod:4)LQNAQHDPLLTGVSSSTNPFRPQK4	51578.3	56554.6	37100.7
B4F795	B4F795	CTL2_RAT	Slc44a2	Choline transporter-like protein 2	1	QFCVPGFK	QFC(UniMod:4)VPGFK	2	QFC(UniMod:4)VPGFK2	226911	233279	212468
D3ZU83	D3ZU83	D3ZU83_RAT	Ergic3	Endoplasmic reticulum-Golgi intermediate compartment protein	1	QFDAYPK	QFDAYPK	2	QFDAYPK2	15222.9	8828.2	10025.1
B2RZ78	B2RZ78	VPS29_RAT	Vps29	Vacuolar protein sorting-associated protein 29	1	QFDVDILISGHTHK	QFDVDILISGHTHK	3	QFDVDILISGHTHK3	6138.46	2514.89	5058.5
B2RZ78	B2RZ78	VPS29_RAT	Vps29	Vacuolar protein sorting-associated protein 29	1	QFDVDILISGHTHK	QFDVDILISGHTHK	4	QFDVDILISGHTHK4	19742.5	10388.5	10428.4
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	QFEEIWER	QFEEIWER	2	QFEEIWER2	30324.4	34791.1	26005.6
Q9JLZ1	Q9JLZ1	GLRX3_RAT	Glrx3	Glutaredoxin-3	1	QFEELLR	QFEELLR	2	QFEELLR2	52685	28120.2	34304.1
A0A8I5ZUI2	A0A8I5ZUI2	A0A8I5ZUI2_RAT	Ano10	Anoctamin	1	QFEEPRPGFHGVLGINSVTGR	QFEEPRPGFHGVLGINSVTGR	4	QFEEPRPGFHGVLGINSVTGR4	9789.37	11097.3	9447.11
Q9WTN5	Q9WTN5	TPC1_RAT	Tpcn1	Two pore calcium channel protein 1	1	QFEGLMR	QFEGLMR	2	QFEGLMR2	17915.9	16859.4	21876.3
A0A0G2K687	A0A0G2K687	A0A0G2K687_RAT	Rubcn	Rubicon autophagy regulator	1	QFEGMQLPAASELEWLVPEHDAPQK	QFEGMQLPAASELEWLVPEHDAPQK	3	QFEGMQLPAASELEWLVPEHDAPQK3	7336.76	5034.62	2994.44
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	QFEHLDPQNQHTFEAR	QFEHLDPQNQHTFEAR	3	QFEHLDPQNQHTFEAR3	22840.6	26987.3	26095.8
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	QFEHLDPQNQHTFEAR	QFEHLDPQNQHTFEAR	4	QFEHLDPQNQHTFEAR4	58624.5	64090.8	61218.3
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	QFEHLNHQNPDTFESK	QFEHLNHQNPDTFESK	3	QFEHLNHQNPDTFESK3	12628.1	17407.9	13549.1
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	QFEHLNHQNPDTFESK	QFEHLNHQNPDTFESK	4	QFEHLNHQNPDTFESK4	101189	88298.8	100949
A0A8I6ASK1	A0A8I6ASK1	A0A8I6ASK1_RAT	P4ha2	procollagen-proline 4-dioxygenase	1	QFFPTDEDESGAAR	QFFPTDEDESGAAR	2	QFFPTDEDESGAAR2	30787.5	37212	33764.2
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	QFGAQANVIGPWIQTK	QFGAQANVIGPWIQTK	2	QFGAQANVIGPWIQTK2	2.12665e+06	2.21676e+06	2.46575e+06
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	QFGAQANVIGPWIQTK	QFGAQANVIGPWIQTK	3	QFGAQANVIGPWIQTK3	536847	716772	699085
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	QFGFMQK	QFGFMQK	2	QFGFMQK2	25207.8	30183.1	34858.9
Q6P6Q9	Q6P6Q9	MICU1_RAT	Micu1	Calcium uptake protein 1, mitochondrial	1	QFGGMLLAYSGVQSK	QFGGMLLAYSGVQSK	2	QFGGMLLAYSGVQSK2	26650.7	22388.8	29952.5
Q6P6Q9	Q6P6Q9	MICU1_RAT	Micu1	Calcium uptake protein 1, mitochondrial	1	QFGGMLLAYSGVQSK	QFGGMLLAYSGVQSK	3	QFGGMLLAYSGVQSK3		2928.82	8192.09
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	QFGHPQIETR	QFGHPQIETR	3	QFGHPQIETR3	89364.5	95926.3	96723.8
P58751	P58751	RELN_RAT	Reln	Reelin	1	QFGIQFR	QFGIQFR	2	QFGIQFR2	88380.4	86084.8	110110
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	QFGMPEGEK	QFGMPEGEK	2	QFGMPEGEK2	32438.2	40100.7	39673.7
Q5FVI6	Q5FVI6	VATC1_RAT	Atp6v1c1	V-type proton ATPase subunit C 1	1	QFGPLVR	QFGPLVR	2	QFGPLVR2	10382.9	10753.2	11652.3
Q63448	Q63448	ACOX3_RAT	Acox3	Peroxisomal acyl-coenzyme A oxidase 3	1	QFGPTDKEEIPVLEYPLQQWR	QFGPTDKEEIPVLEYPLQQWR	3	QFGPTDKEEIPVLEYPLQQWR3	3573.79	3604.12	4842.57
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	QFGPTFALDTVHVDPVIR	QFGPTFALDTVHVDPVIR	3	QFGPTFALDTVHVDPVIR3	274414	281990	279112
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	QFGVAPLTVAR	QFGVAPLTVAR	2	QFGVAPLTVAR2	18809.4	11215.3	12063.2
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QFHEAWK	QFHEAWK	2	QFHEAWK2	5775.21	6217.2	4442.34
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QFHETAEPISDFLSVTEK	QFHETAEPISDFLSVTEK	3	QFHETAEPISDFLSVTEK3	43639.9	30985.7	39099.5
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	QFHFHGWPEVGIPSDGK	QFHFHGWPEVGIPSDGK	3	QFHFHGWPEVGIPSDGK3	12381.6	11585.4	12967.9
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	QFHFHGWPEVGIPSDGK	QFHFHGWPEVGIPSDGK	4	QFHFHGWPEVGIPSDGK4	31549.7	28774.1	20832.3
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	QFHFTSWPDHGVPDTTDLLINFR	QFHFTSWPDHGVPDTTDLLINFR	3	QFHFTSWPDHGVPDTTDLLINFR3	61841.5	59588.9	38695.2
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	QFHFTSWPDHGVPDTTDLLINFR	QFHFTSWPDHGVPDTTDLLINFR	4	QFHFTSWPDHGVPDTTDLLINFR4	273199	243084	212537
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	QFHHQLR	QFHHQLR	2	QFHHQLR2			13983.6
F1LUU1	F1LUU1	F1LUU1_RAT	Itga11	Integrin subunit alpha 11	1	QFHSPFIFR	QFHSPFIFR	3	QFHSPFIFR3	2185.32	2894.5	1346.72
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	QFHSVAAAWQAR	QFHSVAAAWQAR	2	QFHSVAAAWQAR2	9760.58	9056.37	9834.64
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	QFHSVAAAWQAR	QFHSVAAAWQAR	3	QFHSVAAAWQAR3	94935.4	115193	102782
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	QFIAAQGSSR	QFIAAQGSSR	2	QFIAAQGSSR2	47816.1	46056.2	47835.3
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	QFICSHSDGTLTIWNVR	QFIC(UniMod:4)SHSDGTLTIWNVR	3	QFIC(UniMod:4)SHSDGTLTIWNVR3	19946.9	14013.6	33269.7
A0A8I5Y176	A0A8I5Y176	A0A8I5Y176_RAT	Ranbp9	RAN binding protein 9	1	QFIEMVNGTDSEVR	QFIEMVNGTDSEVR	2	QFIEMVNGTDSEVR2	4228.38		
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	QFIETAR	QFIETAR	2	QFIETAR2	29708.9	26404	20702.7
A0A8I6A3Z5	A0A8I6A3Z5	A0A8I6A3Z5_RAT	Uba2	SUMO-activating enzyme subunit 2	1	QFILVMNALDNR	QFILVMNALDNR	2	QFILVMNALDNR2	1901.62	6275.37	5397.62
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	QFIQEFTFR	QFIQEFTFR	2	QFIQEFTFR2	19603.2	19442	19997.4
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	QFITILEATHR	QFITILEATHR	2	QFITILEATHR2	10628.1	19669.9	6743.17
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	QFITILEATHR	QFITILEATHR	3	QFITILEATHR3	91126.2	97204	85958.5
Q8R492	Q8R492	Q8R492_RAT	Fap	Fibroblast activation protein, alpha	1	QFIYLESDYSK	QFIYLESDYSK	2	QFIYLESDYSK2	2404.02	2477.11	5278.21
B5DFI9	B5DFI9	B5DFI9_RAT	Pdk3	Protein-serine/threonine kinase	1	QFLDFGR	QFLDFGR	2	QFLDFGR2	19781.9	9619.66	23109.1
Q63065	Q63065	PDK1_RAT	Pdk1	[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial	1	QFLDFGSVNACEK	QFLDFGSVNAC(UniMod:4)EK	2	QFLDFGSVNAC(UniMod:4)EK2	4056.14	2164.95	6643.26
Q5U300	Q5U300;A0A8I5ZVX0;A0A8I6A544	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	0	QFLDYFK	QFLDYFK	2	QFLDYFK2	18219.3	7231.82	15124.1
A0A8I6A678	A0A8I6A678	A0A8I6A678_RAT	Snx2	Sorting nexin-2	1	QFLESSELPR	QFLESSELPR	2	QFLESSELPR2	27369.2	29453	26091.2
D3Z8F6	D3Z8F6	D3Z8F6_RAT	Dennd1b	DENN domain containing 1B	1	QFLETAVNLQLFK	QFLETAVNLQLFK	2	QFLETAVNLQLFK2	3795.05	1355.62	871.485
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	QFLEVWEK	QFLEVWEK	2	QFLEVWEK2	64431.3	70753.8	73655.5
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	QFLFLSINR	QFLFLSINR	2	QFLFLSINR2	25961	34879.7	34251.5
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	QFLFRPHHIQKPK	QFLFRPHHIQKPK	4	QFLFRPHHIQKPK4	4388.21	6033.57	3737.81
Q5U300	Q5U300;A0A8I5ZVX0;A0A8I6A544	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	0	QFLFRPWDVTK	QFLFRPWDVTK	2	QFLFRPWDVTK2	13097	8868.33	6248.28
Q5U300	Q5U300;A0A8I5ZVX0;A0A8I6A544	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	0	QFLFRPWDVTK	QFLFRPWDVTK	3	QFLFRPWDVTK3	210785	191977	187245
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	QFLGQMTQLNQLLGEVK	QFLGQMTQLNQLLGEVK	2	QFLGQMTQLNQLLGEVK2	562635	741676	817413
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	QFLGQMTQLNQLLGEVK	QFLGQMTQLNQLLGEVK	3	QFLGQMTQLNQLLGEVK3	31922.3	30270.5	40861.5
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	QFLLAAEAVDDIPFGITSNSDVFSK	QFLLAAEAVDDIPFGITSNSDVFSK	3	QFLLAAEAVDDIPFGITSNSDVFSK3	249496	250133	245580
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	QFLLFLTGSDR	QFLLFLTGSDR	2	QFLLFLTGSDR2	4847.23	3825.26	3052.84
B5DF57	B5DF57	B5DF57_RAT	Epb42	protein-glutamine gamma-glutamyltransferase	1	QFLMLGPNQVLR	QFLMLGPNQVLR	2	QFLMLGPNQVLR2	6343.61	762.791	6745.38
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	QFLPFLQR	QFLPFLQR	2	QFLPFLQR2	152548	114793	58038.9
Q64194	Q64194	LICH_RAT	Lipa	Lysosomal acid lipase/cholesteryl ester hydrolase	1	QFLPQSAMVK	QFLPQSAMVK	2	QFLPQSAMVK2		6015.99	4904.93
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	QFLQGQNFFLQEFGK	QFLQGQNFFLQEFGK	2	QFLQGQNFFLQEFGK2	8281.54	8337.38	11856.3
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	QFLQGQNFFLQEFGK	QFLQGQNFFLQEFGK	3	QFLQGQNFFLQEFGK3	4507.67	5639.51	
B2GV06	B2GV06	SCOT1_RAT	Oxct1	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial	1	QFLSGELEVELTPQGTLAER	QFLSGELEVELTPQGTLAER	3	QFLSGELEVELTPQGTLAER3	41923.5	45963.3	51831.3
P97694	P63035;P97696;P97694;A0A0G2K0A0	CYH1_RAT	Cyth1	Cytohesin-1	0	QFLWSFR	QFLWSFR	2	QFLWSFR2	7343.03	6420.29	4952.46
Q5M9G3	Q5M9G3	CAPR1_RAT	Caprin1	Caprin-1	1	QFMAETQFSSGEK	QFMAETQFSSGEK	2	QFMAETQFSSGEK2	9702.03	6356.28	6397.58
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	QFMHQGNVAETTR	QFMHQGNVAETTR	2	QFMHQGNVAETTR2	3965.12	2153.95	2473.97
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	QFMHQGNVAETTR	QFMHQGNVAETTR	3	QFMHQGNVAETTR3	78205.7	73611.7	64463.1
A0A8I6AI94	A0A8I6AI94	A0A8I6AI94_RAT	Dcun1d1	DCN1-like protein	1	QFMIFTQSSEK	QFMIFTQSSEK	2	QFMIFTQSSEK2	7109.72	9602.78	9017.38
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	QFNDHLMPLISSSPK	QFNDHLMPLISSSPK	3	QFNDHLMPLISSSPK3	12248.8	8586.92	7886.01
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	QFNLEITK	QFNLEITK	2	QFNLEITK2	28412	32042.1	33858
P62483	P62483	KCAB2_RAT	Kcnab2	Voltage-gated potassium channel subunit beta-2	1	QFNLIPPICEQAEYHMFQR	QFNLIPPIC(UniMod:4)EQAEYHMFQR	3	QFNLIPPIC(UniMod:4)EQAEYHMFQR3	73839	64061.6	77449.8
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	QFNMEVLK	QFNMEVLK	2	QFNMEVLK2	1658	3497.51	5297.21
P63144	P63144	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	1	QFNMIPPVCEQAEYHLFQR	QFNMIPPVC(UniMod:4)EQAEYHLFQR	3	QFNMIPPVC(UniMod:4)EQAEYHLFQR3	163031	179086	193482
A0A8I5ZJ62	A0A8I5ZJ62	A0A8I5ZJ62_RAT	Glipr2	GLI pathogenesis-related 2	1	QFNNEVLK	QFNNEVLK	2	QFNNEVLK2	35582.6	31065.5	44047.2
D3ZSY8	D3ZSY8	D3ZSY8_RAT	Tbc1d10b	TBC1 domain family, member 10b	1	QFPFHEMFAAR	QFPFHEMFAAR	2	QFPFHEMFAAR2	7733.99		
D3ZSY8	D3ZSY8	D3ZSY8_RAT	Tbc1d10b	TBC1 domain family, member 10b	1	QFPFHEMFAAR	QFPFHEMFAAR	3	QFPFHEMFAAR3	45433.5	36486.5	40013
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	QFPGHLLAWDFVK	QFPGHLLAWDFVK	3	QFPGHLLAWDFVK3	6338.19	7692.41	4944.47
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	QFPIREDFK	QFPIREDFK	2	QFPIREDFK2	2.29115e+06	2.3486e+06	2.2325e+06
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	QFPIREDFK	QFPIREDFK	3	QFPIREDFK3	2.02079e+07	2.01978e+07	1.98872e+07
A0A140UHX9	A0A140UHX9	A0A140UHX9_RAT	Ccz1	CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated	1	QFPPALLSFFIYNPR	QFPPALLSFFIYNPR	2	QFPPALLSFFIYNPR2		13312.6	6785.26
P08650	P08650	CO5_RAT	C5	Complement C5	1	QFPRDENPVSHVYLEVVSMHFSK	QFPRDENPVSHVYLEVVSMHFSK	4	QFPRDENPVSHVYLEVVSMHFSK4	17840.5	19802.1	14368.4
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	QFPVPLINR	QFPVPLINR	2	QFPVPLINR2	9419.05	5508.82	7459.51
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	QFQAFGDLFDEAIK	QFQAFGDLFDEAIK	2	QFQAFGDLFDEAIK2	11086.1	14636.4	11263.8
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	QFQDAGHFDAENIK	QFQDAGHFDAENIK	2	QFQDAGHFDAENIK2	2257.73	3182.62	
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	QFQDAGHFDAENIK	QFQDAGHFDAENIK	3	QFQDAGHFDAENIK3	86132	105071	90214.4
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	QFQDAGHFDAENIKK	QFQDAGHFDAENIKK	3	QFQDAGHFDAENIKK3	119861	120042	110513
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	QFQDAGHFDAENIKK	QFQDAGHFDAENIKK	4	QFQDAGHFDAENIKK4	102426	96406.6	103927
Q53UA7	O88664;Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	0	QFQDTCK	QFQDTC(UniMod:4)K	1	QFQDTC(UniMod:4)K1	1269.96	1275.89	1940.68
Q53UA7	O88664;Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	0	QFQDTCK	QFQDTC(UniMod:4)K	2	QFQDTC(UniMod:4)K2	74116.2	48554.1	27581.4
P36953	P36953	AFAM_RAT	Afm	Afamin	1	QFQELGK	QFQELGK	1	QFQELGK1	2811.42	2706.2	2832.71
P36953	P36953	AFAM_RAT	Afm	Afamin	1	QFQELGK	QFQELGK	2	QFQELGK2	156191	145545	154377
Q5M848	Q5M848	CRCM1_RAT	Orai1	Calcium release-activated calcium channel protein 1	1	QFQELNELAEFAR	QFQELNELAEFAR	2	QFQELNELAEFAR2	66890.3	57337.1	65145.2
Q5M848	Q5M848	CRCM1_RAT	Orai1	Calcium release-activated calcium channel protein 1	1	QFQELNELAEFAR	QFQELNELAEFAR	3	QFQELNELAEFAR3	18176.7	17898.2	19534.3
F1LXD8	F1LXD8	F1LXD8_RAT	Emilin2	Elastin microfibril interfacer 2	1	QFQETSHSIQK	QFQETSHSIQK	3	QFQETSHSIQK3	5552.2		
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	QFQLSIENLNQPVLLFGRPQGDGEIR	QFQLSIENLNQPVLLFGRPQGDGEIR	4	QFQLSIENLNQPVLLFGRPQGDGEIR4	14023.5	6616.87	7098
D3ZLA3	D3ZLA3	D3ZLA3_RAT	Cpne3	Copine 3	1	QFQNAPK	QFQNAPK	2	QFQNAPK2		23882.6	
B1WBZ6	B1WBZ6	B1WBZ6_RAT	RGD1565685	RGD1565685 protein	1	QFQPHCQVCTDWK	QFQPHC(UniMod:4)QVC(UniMod:4)TDWK	3	QFQPHC(UniMod:4)QVC(UniMod:4)TDWK3	17956.4	10940.3	9156.64
Q6AYB5	Q6AYB5	SRP54_RAT	Srp54	Signal recognition particle subunit SRP54	1	QFQQGAAGNMK	QFQQGAAGNMK	2	QFQQGAAGNMK2	808.221	4749.04	
Q5XIL2	Q5XIL2	P4K2B_RAT	Pi4k2b	Phosphatidylinositol 4-kinase type 2-beta	1	QFQSQFER	QFQSQFER	2	QFQSQFER2		4994.04	6540.5
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	QFSALVPAFDPRPGR	QFSALVPAFDPRPGR	3	QFSALVPAFDPRPGR3	11073.1	11868.5	10838.3
Q498T9	Q498T9	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	1	QFSEQQPAFR	QFSEQQPAFR	2	QFSEQQPAFR2	8928.73	13888	15009.8
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	QFSITCEVNSVWTSPQDVCIR	QFSITC(UniMod:4)EVNSVWTSPQDVC(UniMod:4)IR	3	QFSITC(UniMod:4)EVNSVWTSPQDVC(UniMod:4)IR3	18041	28098.2	26615.4
P09895	A0A8I6GKE4;P09895	RL5_RAT	Rpl5	Large ribosomal subunit protein uL18	0	QFSQYIK	QFSQYIK	2	QFSQYIK2	20013.5	16995.5	9244.77
Q5XIT9	Q5XIT9	MCCB_RAT	Mccc2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	1	QFSSAEEAALKEPIIK	QFSSAEEAALKEPIIK	3	QFSSAEEAALKEPIIK3	16974	25066.4	23114
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	QFSSALIDCLINPLQEQMEEWKK	QFSSALIDC(UniMod:4)LINPLQEQMEEWKK	3	QFSSALIDC(UniMod:4)LINPLQEQMEEWKK3		6483.1	3393.28
P70541	P70541	EI2BG_RAT	Eif2b3	Translation initiation factor eIF-2B subunit gamma	1	QFSSASSQQR	QFSSASSQQR	2	QFSSASSQQR2			15988.1
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	QFSVLPPHILTR	QFSVLPPHILTR	3	QFSVLPPHILTR3	10595.3	10055.4	7608.57
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	QFSVQAEDERESTDDESNPLGR	QFSVQAEDERESTDDESNPLGR	3	QFSVQAEDERESTDDESNPLGR3	4618.05	5874.17	12576.5
P13803	P13803	ETFA_RAT	Etfa	Electron transfer flavoprotein subunit alpha, mitochondrial	1	QFSYTHICAGASAFGK	QFSYTHIC(UniMod:4)AGASAFGK	3	QFSYTHIC(UniMod:4)AGASAFGK3	37603.5	27172.8	26677.2
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	QFTLPPNLGQYHR	QFTLPPNLGQYHR	3	QFTLPPNLGQYHR3		21572.5	
Q9QZR8	Q9QZR8	PDZD2_RAT	Pdzd2	PDZ domain-containing protein 2	1	QFTPGRADLLVSEATQPQGICEK	QFTPGRADLLVSEATQPQGIC(UniMod:4)EK	3	QFTPGRADLLVSEATQPQGIC(UniMod:4)EK3	21432.3	18647.1	19040.9
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	QFTQPEASYGR	QFTQPEASYGR	2	QFTQPEASYGR2	31104.1	38379.5	24482.6
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	QFTQPEASYGREPTSPVSR	QFTQPEASYGREPTSPVSR	3	QFTQPEASYGREPTSPVSR3	142383	112128	129894
Q6IFU8	Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	1	QFTSSSSIK	QFTSSSSIK	2	QFTSSSSIK2	7624.63		6445.43
Q6IFV1	Q6IFV1	K1C14_RAT	Krt14	Keratin, type I cytoskeletal 14	1	QFTSSSSMK	QFTSSSSMK	2	QFTSSSSMK2	56730.6	35052.8	70816.9
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	QFVDAEHSK	QFVDAEHSK	2	QFVDAEHSK2	5169.47		1946.8
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	QFVEMTR	QFVEMTR	2	QFVEMTR2	114733	103628	114802
Q5FVM7	Q5FVM7	DJC16_RAT	Dnajc16	DnaJ homolog subfamily C member 16	1	QFVESLLPGNLVEK	QFVESLLPGNLVEK	2	QFVESLLPGNLVEK2	15122	5528.56	9371.28
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	QFVEYASEK	QFVEYASEK	2	QFVEYASEK2	5849.35	6611.67	7274.3
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	QFVFDLHSGK	QFVFDLHSGK	2	QFVFDLHSGK2	122721	132029	107216
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	QFVFDLHSGK	QFVFDLHSGK	3	QFVFDLHSGK3	226995	214004	195657
A0A8I5ZP57	A0A8I5ZP57	A0A8I5ZP57_RAT	Pkdcc	Protein kinase domain containing, cytoplasmic	1	QFVLVDGELK	QFVLVDGELK	2	QFVLVDGELK2	55070.7	52797.3	62092
P09650	P09650	MCPT1_RAT	Mcpt1	Mast cell protease 1	1	QFVMTAAHCK	QFVMTAAHC(UniMod:4)K	2	QFVMTAAHC(UniMod:4)K2	4217.56		1913.26
P09650	P09650	MCPT1_RAT	Mcpt1	Mast cell protease 1	1	QFVMTAAHCK	QFVMTAAHC(UniMod:4)K	3	QFVMTAAHC(UniMod:4)K3	19216.2	13149.3	12871.3
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	QFVQSAK	QFVQSAK	1	QFVQSAK1	13747	13224.3	10648.4
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	QFVQSAK	QFVQSAK	2	QFVQSAK2	378860	376543	417053
Q63615	Q63615	VP33A_RAT	Vps33a	Vacuolar protein sorting-associated protein 33A	1	QFVSQLPHMQAAR	QFVSQLPHMQAAR	3	QFVSQLPHMQAAR3	26636.1	21489.3	24838.4
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	QFVTATDVVR	QFVTATDVVR	2	QFVTATDVVR2	46075.1	48468.5	44384.7
Q63598	A0A0G2QC04;Q63598	PLST_RAT	Pls3	Plastin-3	0	QFVTPADVVSGNPK	QFVTPADVVSGNPK	2	QFVTPADVVSGNPK2	143753	112878	117907
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	QFVVFEGNHYFYSPYPTK	QFVVFEGNHYFYSPYPTK	3	QFVVFEGNHYFYSPYPTK3	126636	103085	130728
Q02769	Q02769	FDFT_RAT	Fdft1	Squalene synthase	1	QFWPQEVWGK	QFWPQEVWGK	2	QFWPQEVWGK2	16695.4	12741.1	24972.4
Q63100	Q63100	DC1I1_RAT	Dync1i1	Cytoplasmic dynein 1 intermediate chain 1	1	QFYDEHWSK	QFYDEHWSK	3	QFYDEHWSK3	7811.09		9037.35
Q62745	Q62745	CD81_RAT	Cd81	CD81 antigen	1	QFYDQALQQAVMDDDANNAK	QFYDQALQQAVMDDDANNAK	3	QFYDQALQQAVMDDDANNAK3		14682.7	9143.8
P14056	P14056	ARAF_RAT	Araf	Serine/threonine-protein kinase A-Raf	1	QFYHSIQDLSGGSR	QFYHSIQDLSGGSR	3	QFYHSIQDLSGGSR3	16919	32086.5	22190.2
Q5RKI1	Q5RKI1;A0A8I6GF11;Q6P3V8	IF4A2_RAT	Eif4a2	Eukaryotic initiation factor 4A-II	0	QFYINVER	QFYINVER	2	QFYINVER2	51329.4	16888.2	34676.8
Q5RKI1	Q5RKI1;A0A8I6GF11;Q6P3V8	IF4A2_RAT	Eif4a2	Eukaryotic initiation factor 4A-II	0	QFYINVEREEWK	QFYINVEREEWK	3	QFYINVEREEWK3	15975.1	12755.3	19967
Q5M872	Q5M872	DPEP2_RAT	Dpep2	Dipeptidase 2	1	QFYQNGLQDTNLR	QFYQNGLQDTNLR	2	QFYQNGLQDTNLR2	1887.77		2403.23
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	QFYTYNYGSQSR	QFYTYNYGSQSR	2	QFYTYNYGSQSR2	201254	218337	238341
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	QFYTYNYGSQSR	QFYTYNYGSQSR	3	QFYTYNYGSQSR3	17342.4	13386.3	20872.8
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	QFYVAAQGILWNYHPESADPSLNSIPSFK	QFYVAAQGILWNYHPESADPSLNSIPSFK	4	QFYVAAQGILWNYHPESADPSLNSIPSFK4	511727	506749	515626
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	QFYVAAQGILWNYHPESADPSLNSIPSFKK	QFYVAAQGILWNYHPESADPSLNSIPSFKK	4	QFYVAAQGILWNYHPESADPSLNSIPSFKK4	50681	67909.7	71124.4
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	QGAAEASEEEQGAAPLC	QGAAEASEEEQGAAPLC(UniMod:4)	2	QGAAEASEEEQGAAPLC(UniMod:4)2	11170.6	10801.2	12953.5
A0A0G2JU49	A0A0G2JU49	A0A0G2JU49_RAT	Mtx1	Metaxin 1	1	QGADTLAFISLLEEK	QGADTLAFISLLEEK	2	QGADTLAFISLLEEK2	11924.1	10299	15901.8
Q6P6S9	Q6P6S9	ENTP5_RAT	Entpd5	Ectonucleoside triphosphate diphosphohydrolase 5	1	QGAETVQELLEVAK	QGAETVQELLEVAK	2	QGAETVQELLEVAK2	34931.6	35380.9	43569.5
A0A8I6AMK1	A0A8I6AMK1	A0A8I6AMK1_RAT	Kdsr	3-dehydrosphinganine reductase	1	QGAFITLVAR	QGAFITLVAR	2	QGAFITLVAR2	4243.32	4004.41	
Q9Z2F5	Q9Z2F5	CTBP1_RAT	Ctbp1	C-terminal-binding protein 1	1	QGAFLVNTAR	QGAFLVNTAR	2	QGAFLVNTAR2	21172.6	25681.1	21783.2
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	QGAGFSLR	QGAGFSLR	2	QGAGFSLR2	35513	38798.2	45232.8
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	QGAGGVEGTEWWDTLAFHQR	QGAGGVEGTEWWDTLAFHQR	3	QGAGGVEGTEWWDTLAFHQR3	17424.3	32601	12777.1
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	QGAGLNMGVHNALGSDEK	QGAGLNMGVHNALGSDEK	2	QGAGLNMGVHNALGSDEK2		3072.11	
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	QGAGLNMGVHNALGSDEK	QGAGLNMGVHNALGSDEK	3	QGAGLNMGVHNALGSDEK3	7737.19	21883.9	9911.52
A8WCF8	A8WCF8	TPRGL_RAT	Tprg1l	Tumor protein p63-regulated gene 1-like protein	1	QGAGTPLR	QGAGTPLR	2	QGAGTPLR2	47886.1	50899.8	46275
A0A0G2KB61	A0A0G2KB61	A0A0G2KB61_RAT	Ppp1r13b	Protein phosphatase 1, regulatory subunit 13B	1	QGAISSQPLPLSALGATDK	QGAISSQPLPLSALGATDK	2	QGAISSQPLPLSALGATDK2			2154.62
P06685	P06687;P06685;P06686	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	0	QGAIVAVTGDGVNDSPALK	QGAIVAVTGDGVNDSPALK	2	QGAIVAVTGDGVNDSPALK2	24121.3	20284.9	25401
P06685	P06687;P06685;P06686	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	0	QGAIVAVTGDGVNDSPALK	QGAIVAVTGDGVNDSPALK	3	QGAIVAVTGDGVNDSPALK3	13609.2	16761.2	13773.9
P06685	P06687;P06685;P06686	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	0	QGAIVAVTGDGVNDSPALKK	QGAIVAVTGDGVNDSPALKK	3	QGAIVAVTGDGVNDSPALKK3	36533.9	44105.6	37863.8
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	QGALGAK	QGALGAK	1	QGALGAK1	57230.4		66503.3
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	QGALIASALIMIQQTEITCPK	QGALIASALIMIQQTEITC(UniMod:4)PK	3	QGALIASALIMIQQTEITC(UniMod:4)PK3	9960.38	10668.1	11139.8
A0A8I6G604	A0A8I6G604	A0A8I6G604_RAT	Lman2l	Lectin, mannose-binding 2-like	1	QGALWNR	QGALWNR	2	QGALWNR2	7084.43	6182.49	
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	QGANGYCATLISSNGYLSK	QGANGYC(UniMod:4)ATLISSNGYLSK	3	QGANGYC(UniMod:4)ATLISSNGYLSK3	11135.3	3269.82	13368.9
A0A8I6AH91	A0A8I6AH91	A0A8I6AH91_RAT	Pcbp1	Poly(rC) binding protein 1	1	QGANINEIR	QGANINEIR	2	QGANINEIR2	87038.6	93765.4	94729.7
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	QGASPILR	QGASPILR	2	QGASPILR2	31465	25120.1	29646.1
A0A8I5ZNI3	A0A8I5ZNI3	A0A8I5ZNI3_RAT	Glipr1	GLI pathogenesis-related 1	1	QGATCSACPK	QGATC(UniMod:4)SAC(UniMod:4)PK	2	QGATC(UniMod:4)SAC(UniMod:4)PK2			10485.8
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	QGCEIIQSTPYGR	QGC(UniMod:4)EIIQSTPYGR	2	QGC(UniMod:4)EIIQSTPYGR2	6600.27	10331.3	12535.8
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	QGCEIIQSTPYGRPANISGSTSSQR	QGC(UniMod:4)EIIQSTPYGRPANISGSTSSQR	3	QGC(UniMod:4)EIIQSTPYGRPANISGSTSSQR3		11111.7	5259.71
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	QGCIEEQCK	QGC(UniMod:4)IEEQC(UniMod:4)K	2	QGC(UniMod:4)IEEQC(UniMod:4)K2	6465.51		4260.86
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	QGCSCEVCGFSCHITCVNK	QGC(UniMod:4)SC(UniMod:4)EVC(UniMod:4)GFSC(UniMod:4)HITC(UniMod:4)VNK	3	QGC(UniMod:4)SC(UniMod:4)EVC(UniMod:4)GFSC(UniMod:4)HITC(UniMod:4)VNK3	9859.06	11590.5	9657.37
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	QGDAEFNR	QGDAEFNR	2	QGDAEFNR2	183097	185899	172627
Q5I0C3	Q5I0C3	MCCA_RAT	Mccc1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	1	QGDEVSVHYDPMIAK	QGDEVSVHYDPMIAK	3	QGDEVSVHYDPMIAK3	16778.8	14525	19687.4
A0A8I5Y9A0	A0A8I5Y9A0	A0A8I5Y9A0_RAT	Tex264	Testis expressed 264	1	QGDFYVPEVK	QGDFYVPEVK	2	QGDFYVPEVK2	20058.5	30428	26144.9
Q4G063	Q4G063	CREL2_RAT	Creld2	Protein disulfide isomerase Creld2	1	QGDGSCQCHAGYK	QGDGSC(UniMod:4)QC(UniMod:4)HAGYK	2	QGDGSC(UniMod:4)QC(UniMod:4)HAGYK2			2371.54
Q4G063	Q4G063	CREL2_RAT	Creld2	Protein disulfide isomerase Creld2	1	QGDGSCQCHAGYK	QGDGSC(UniMod:4)QC(UniMod:4)HAGYK	3	QGDGSC(UniMod:4)QC(UniMod:4)HAGYK3			7760.96
A0A8I6ANR6	A0A8I6ANR6	A0A8I6ANR6_RAT	Chuk	IkappaB kinase	1	QGDLMESLEQR	QGDLMESLEQR	2	QGDLMESLEQR2	10665.1	4015.39	7788.07
F1M471	F1M471	F1M471_RAT	Epm2aip1	EPM2A interacting protein 1	1	QGDMSLAAVLTPEER	QGDMSLAAVLTPEER	2	QGDMSLAAVLTPEER2	2303.6	3609.28	7870.13
F1LN92	F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	1	QGDMVLEKPYSEATAR	QGDMVLEKPYSEATAR	3	QGDMVLEKPYSEATAR3	11491	14493	13324.6
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	QGDSCESIIR	QGDSC(UniMod:4)ESIIR	2	QGDSC(UniMod:4)ESIIR2	12147.8	8370.73	16591.7
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	QGDSPWQAILLDSK	QGDSPWQAILLDSK	2	QGDSPWQAILLDSK2	10146.3	4311.38	11837.7
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	QGDSPWQAILLDSK	QGDSPWQAILLDSK	3	QGDSPWQAILLDSK3	91417.1	88766.4	103064
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	QGDSPWQAILLDSKK	QGDSPWQAILLDSKK	2	QGDSPWQAILLDSKK2	48223.1	57740.4	52793.5
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	QGDSPWQAILLDSKK	QGDSPWQAILLDSKK	3	QGDSPWQAILLDSKK3	1.01e+06	1.17438e+06	1.25323e+06
Q5XIG8	Q5XIG8	STRAP_RAT	Strap	Serine-threonine kinase receptor-associated protein	1	QGDTGDWIGTFLGHK	QGDTGDWIGTFLGHK	3	QGDTGDWIGTFLGHK3	59851.4	52166.3	50387.5
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	QGDTNTITNVFDTVMR	QGDTNTITNVFDTVMR	2	QGDTNTITNVFDTVMR2		9885.62	7909.1
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	QGDTNTITNVFDTVMR	QGDTNTITNVFDTVMR	3	QGDTNTITNVFDTVMR3	4227.27		
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	QGEALNLLETGYSR	QGEALNLLETGYSR	2	QGEALNLLETGYSR2	766273	610600	568106
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	QGEALNLLETGYSR	QGEALNLLETGYSR	3	QGEALNLLETGYSR3	299225	248929	214470
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	QGEDIEIIR	QGEDIEIIR	2	QGEDIEIIR2	1.19546e+06	1.28804e+06	1.28868e+06
Q9Z1W6	Q9Z1W6	LYRIC_RAT	Mtdh	Protein LYRIC	1	QGEDNSITQDTEDLEK	QGEDNSITQDTEDLEK	2	QGEDNSITQDTEDLEK2	4612.12	7470.18	9488.31
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	QGEERDPEVELEHQQCLAAFSR	QGEERDPEVELEHQQC(UniMod:4)LAAFSR	4	QGEERDPEVELEHQQC(UniMod:4)LAAFSR4		3756.05	5991
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	QGEFGLASICNGGGGASAVLIEK	QGEFGLASIC(UniMod:4)NGGGGASAVLIEK	3	QGEFGLASIC(UniMod:4)NGGGGASAVLIEK3	8100.15	7749.71	7367.38
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	QGEFGLASICNGGGGASAVLIEKL	QGEFGLASIC(UniMod:4)NGGGGASAVLIEKL	3	QGEFGLASIC(UniMod:4)NGGGGASAVLIEKL3	6200.17	4958.83	7242.9
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	QGEGSGDMAWEEVR	QGEGSGDMAWEEVR	2	QGEGSGDMAWEEVR2	4195.94	3848.76	
P20650	P20650	PPM1A_RAT	Ppm1a	Protein phosphatase 1A	1	QGEGVPDLVHVMR	QGEGVPDLVHVMR	3	QGEGVPDLVHVMR3	34252.6	22092.9	33107.8
B5DFD1	B5DFD1	B5DFD1_RAT	Nudcd1	NudC domain-containing protein 1	1	QGELIRDPAQCAAIAER	QGELIRDPAQC(UniMod:4)AAIAER	3	QGELIRDPAQC(UniMod:4)AAIAER3	8139.78	12181.9	
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	QGEQLVR	QGEQLVR	1	QGEQLVR1	3353.93		2179.36
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	QGEQLVR	QGEQLVR	2	QGEQLVR2	659778	702759	692671
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	QGESSSQSRPDSQQLK	QGESSSQSRPDSQQLK	3	QGESSSQSRPDSQQLK3	1419.01		
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	QGETVSLVIAR	QGETVSLVIAR	2	QGETVSLVIAR2	7963.23	9306.17	
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	QGEVTQATVK	QGEVTQATVK	2	QGEVTQATVK2	168178	158881	196457
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	QGFAQSLLK	QGFAQSLLK	2	QGFAQSLLK2	5811.2	2887.56	
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	QGFDFLCMPVFHPR	QGFDFLC(UniMod:4)MPVFHPR	3	QGFDFLC(UniMod:4)MPVFHPR3	52828.4	51445.4	52920.7
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	QGFFKPEYGR	QGFFKPEYGR	3	QGFFKPEYGR3	20911.4	25015.8	25641.5
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	QGFFKPEYGRPSVSAPNPR	QGFFKPEYGRPSVSAPNPR	3	QGFFKPEYGRPSVSAPNPR3	7300.13	8941.66	
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	QGFFKPEYGRPSVSAPNPR	QGFFKPEYGRPSVSAPNPR	4	QGFFKPEYGRPSVSAPNPR4	98106.8	99179.8	106529
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	QGFFPDSVNK	QGFFPDSVNK	2	QGFFPDSVNK2	2.80656e+06	3.18849e+06	3.18049e+06
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	QGFGNLPICMAK	QGFGNLPIC(UniMod:4)MAK	2	QGFGNLPIC(UniMod:4)MAK2	25371.1	25268.2	19767.2
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	QGFISSLK	QGFISSLK	2	QGFISSLK2	41325.9	30828.3	36075.4
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	QGFIVVK	QGFIVVK	2	QGFIVVK2	13212.2	7914.97	13234.9
G3V8Z6	G3V8Z6	G3V8Z6_RAT	Krit1	KRIT1, ankyrin repeat containing	1	QGFLNEENLK	QGFLNEENLK	2	QGFLNEENLK2	6727.96	5472.02	4857.87
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	QGFNVVVESGAGEASK	QGFNVVVESGAGEASK	2	QGFNVVVESGAGEASK2	9700.13	16274.6	7074.24
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	QGFNVVVESGAGEASKFPDDLYR	QGFNVVVESGAGEASKFPDDLYR	3	QGFNVVVESGAGEASKFPDDLYR3	27087.9	20365.4	13935.1
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QGFPNRVVFQEFR	QGFPNRVVFQEFR	3	QGFPNRVVFQEFR3	25982.3	44503.4	31021.3
P05696	P68403;P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	0	QGFQCQVCCFVVHK	QGFQC(UniMod:4)QVC(UniMod:4)C(UniMod:4)FVVHK	2	QGFQC(UniMod:4)QVC(UniMod:4)C(UniMod:4)FVVHK2	12543.8	13209.2	11772.5
P05696	P68403;P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	0	QGFQCQVCCFVVHK	QGFQC(UniMod:4)QVC(UniMod:4)C(UniMod:4)FVVHK	3	QGFQC(UniMod:4)QVC(UniMod:4)C(UniMod:4)FVVHK3	182367	174132	195964
B2RZ77	B2RZ77	B2RZ77_RAT	Dpt	Dermatopontin	1	QGFSYQCPHGQVVVAVR	QGFSYQC(UniMod:4)PHGQVVVAVR	2	QGFSYQC(UniMod:4)PHGQVVVAVR2	22351.9	19102.6	20454.1
B2RZ77	B2RZ77	B2RZ77_RAT	Dpt	Dermatopontin	1	QGFSYQCPHGQVVVAVR	QGFSYQC(UniMod:4)PHGQVVVAVR	3	QGFSYQC(UniMod:4)PHGQVVVAVR3	461687	460818	469802
P0C2C4	P0C2C4	RM10_RAT	Mrpl10	Large ribosomal subunit protein uL10m	1	QGFVEYAK	QGFVEYAK	2	QGFVEYAK2	13909.7	6197.5	5772.99
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	QGFVPAAYVK	QGFVPAAYVK	2	QGFVPAAYVK2	488341	514278	543643
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	QGFWEEFETLQQQECK	QGFWEEFETLQQQEC(UniMod:4)K	3	QGFWEEFETLQQQEC(UniMod:4)K3	16575.3	14549.1	15241.3
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	QGFWESHLELR	QGFWESHLELR	2	QGFWESHLELR2	9901.41	5884.49	5260.82
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	QGFWESHLELR	QGFWESHLELR	3	QGFWESHLELR3	93886.8	70593.3	86767
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	QGFYVALR	QGFYVALR	2	QGFYVALR2	4840.93	9053.44	6913.53
P97531	P97531	CIP4_RAT	Trip10	Cdc42-interacting protein 4	1	QGGEGYVPTSYLR	QGGEGYVPTSYLR	2	QGGEGYVPTSYLR2	10408	14188.2	15155.9
D3ZUY0	D3ZUY0	D3ZUY0_RAT	Rdh14	Retinol dehydrogenase 14	1	QGGGDPGLMHGK	QGGGDPGLMHGK	3	QGGGDPGLMHGK3	12522.6	23121.5	18554.5
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	QGGGYNPLSSPQK	QGGGYNPLSSPQK	2	QGGGYNPLSSPQK2	129204	117435	146712
A0A8I6A5I4	A0A8I6A5I4	A0A8I6A5I4_RAT	Commd1	COMMD1 N-terminal domain-containing protein	1	QGGITSEQAAVISK	QGGITSEQAAVISK	2	QGGITSEQAAVISK2	4116.73		2620.33
Q9Z0V5	Q9Z0V5	PRDX4_RAT	Prdx4	Peroxiredoxin-4	1	QGGLGPIR	QGGLGPIR	2	QGGLGPIR2	119704	91346.6	119128
Q63716	Q63716;A0A0G2K3Z9	PRDX1_RAT	Prdx1	Peroxiredoxin-1	0	QGGLGPMNIPLVSDPK	QGGLGPMNIPLVSDPK	2	QGGLGPMNIPLVSDPK2	71556.5	62413.1	68022
Q63716	Q63716;A0A0G2K3Z9	PRDX1_RAT	Prdx1	Peroxiredoxin-1	0	QGGLGPMNIPLVSDPKR	QGGLGPMNIPLVSDPKR	3	QGGLGPMNIPLVSDPKR3	66440.1	64040.2	76460.6
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	QGGLLVNFHPSILTCLLPQLTSPR	QGGLLVNFHPSILTC(UniMod:4)LLPQLTSPR	3	QGGLLVNFHPSILTC(UniMod:4)LLPQLTSPR3	84851	75956.2	82404.2
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	QGGQLQVEK	QGGQLQVEK	2	QGGQLQVEK2	104664	123053	99911.2
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	QGGTLDDLEEQAR	QGGTLDDLEEQAR	2	QGGTLDDLEEQAR2	3644.31	6650.06	3112.82
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	QGGVLFGLYSR	QGGVLFGLYSR	2	QGGVLFGLYSR2	36460.6	38906.8	25535.1
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	QGGYSMHQLQGNK	QGGYSMHQLQGNK	3	QGGYSMHQLQGNK3	13303.6	12420	22704.9
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	QGHGLASTASPSLGTR	QGHGLASTASPSLGTR	3	QGHGLASTASPSLGTR3	17568.9	23498.4	22336.2
P62944	P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	QGHIYMEMNFTNK	QGHIYMEMNFTNK	3	QGHIYMEMNFTNK3	4335.97	5565.18	917.767
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	QGHPYQWVFPR	QGHPYQWVFPR	3	QGHPYQWVFPR3	3032.47	2988.43	2979.72
A0A0G2JUF2	A0A0G2JUF2	A0A0G2JUF2_RAT	Snx30	Sorting nexin family member 30	1	QGIALLTR	QGIALLTR	2	QGIALLTR2	6249.88	10458.1	5682.3
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	QGIETHLFR	QGIETHLFR	2	QGIETHLFR2	7655.42	8826.54	2793.06
Q5XIL4	Q5XIL4	Q5XIL4_RAT	Sorbs3	Sorbin and SH3 domain containing 3	1	QGIFPASYVQINR	QGIFPASYVQINR	2	QGIFPASYVQINR2	30881.7	26022.6	25484
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	QGIFSVTNPHPEIFLVVR	QGIFSVTNPHPEIFLVVR	3	QGIFSVTNPHPEIFLVVR3			15607.6
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	QGIHVLVSTSNVSSLEGAR	QGIHVLVSTSNVSSLEGAR	3	QGIHVLVSTSNVSSLEGAR3	12913.7	3889.44	
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	QGILSFDLSDPEKEK	QGILSFDLSDPEKEK	2	QGILSFDLSDPEKEK2	4382.66	6886.6	2712.16
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	QGILSFDLSDPEKEK	QGILSFDLSDPEKEK	3	QGILSFDLSDPEKEK3	25245.8	26625.9	17326.4
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	QGIPFVGQVLLVDGR	QGIPFVGQVLLVDGR	2	QGIPFVGQVLLVDGR2	18602.3	24614.8	26992.2
Q4KLJ8	Q4KLJ8	PDCL3_RAT	Pdcl3	Phosducin-like protein 3	1	QGIPLCSLINHHLSGLAR	QGIPLC(UniMod:4)SLINHHLSGLAR	4	QGIPLC(UniMod:4)SLINHHLSGLAR4	72548.4	90942.1	78845.5
A0A8I5ZTB8	A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	QGIPNESWR	QGIPNESWR	2	QGIPNESWR2	21938.8	17404.3	17136
Q02253	Q02253	MMSA_RAT	Aldh6a1	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial	1	QGIQFYTQLK	QGIQFYTQLK	2	QGIQFYTQLK2	50335.8	52283.3	42338.9
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	QGIQLNK	QGIQLNK	1	QGIQLNK1	2020.47	1298.78	
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	QGIQLNK	QGIQLNK	2	QGIQLNK2	127318	89842.6	80477.5
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	QGIVHLDLKPENIMCVNK	QGIVHLDLKPENIMC(UniMod:4)VNK	3	QGIVHLDLKPENIMC(UniMod:4)VNK3	51932.3	48975.3	53502
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	QGIVHLDLKPENIMCVNK	QGIVHLDLKPENIMC(UniMod:4)VNK	4	QGIVHLDLKPENIMC(UniMod:4)VNK4	154269	168831	164998
Q63965	Q63965	SFXN1_RAT	Sfxn1	Sideroflexin-1	1	QGIVPAGLTENELWR	QGIVPAGLTENELWR	2	QGIVPAGLTENELWR2	331514	320273	297864
Q63965	Q63965	SFXN1_RAT	Sfxn1	Sideroflexin-1	1	QGIVPAGLTENELWR	QGIVPAGLTENELWR	3	QGIVPAGLTENELWR3	7351.77	5946.37	7440.42
Q641Z2	Q641Z2	PTN9_RAT	Ptpn9	Tyrosine-protein phosphatase non-receptor type 9	1	QGIYEEYEDIRR	QGIYEEYEDIRR	3	QGIYEEYEDIRR3	5312.22	8614.47	6743.96
D4A929	D4A929	WDR81_RAT	Wdr81	WD repeat-containing protein 81	1	QGLACGALSLHHIAVDEK	QGLAC(UniMod:4)GALSLHHIAVDEK	4	QGLAC(UniMod:4)GALSLHHIAVDEK4			4370.95
G3V7E6	G3V7E6	G3V7E6_RAT	Pcm1	Pericentriolar material 1	1	QGLAETASPVAVSLR	QGLAETASPVAVSLR	2	QGLAETASPVAVSLR2	1445.96	1880.37	3825.34
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	QGLANVVSLEWLR	QGLANVVSLEWLR	2	QGLANVVSLEWLR2	24311.7	25986.1	20184.2
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	QGLAPANR	QGLAPANR	2	QGLAPANR2	98459.5	125437	130122
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	QGLCCIYCK	QGLC(UniMod:4)C(UniMod:4)IYC(UniMod:4)K	2	QGLC(UniMod:4)C(UniMod:4)IYC(UniMod:4)K2	14673.8	25558.3	11797.2
F1LR42	F1LR42	F1LR42_RAT	Rufy1	RUN and FYVE domain containing 1	1	QGLDEMYSDVWK	QGLDEMYSDVWK	2	QGLDEMYSDVWK2	3317.67		2634.59
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	QGLDNVHK	QGLDNVHK	2	QGLDNVHK2	3822.06	2319.28	3092.76
Q0PMD2	Q0PMD2	ANTR1_RAT	Antxr1	Anthrax toxin receptor 1	1	QGLEELQK	QGLEELQK	2	QGLEELQK2	50738.8	38032.9	36346.9
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	QGLELAADCHLSR	QGLELAADC(UniMod:4)HLSR	3	QGLELAADC(UniMod:4)HLSR3	5431.6	14925.6	9558.06
A0A8I6AGQ4	A0A8I6AGQ4	A0A8I6AGQ4_RAT	ENSRNOG00000070415	Ig-like domain-containing protein	1	QGLELIGR	QGLELIGR	2	QGLELIGR2	14413.1	6580.99	6720.03
Q5U211	A0A096MKE2;Q5U211	SNX3_RAT	Snx3	Sorting nexin-3	0	QGLEQFINK	QGLEQFINK	2	QGLEQFINK2	8662.95	4144.44	5020.6
A0A8I5ZQZ1	A0A8I5ZQZ1	A0A8I5ZQZ1_RAT	Nufip2	Nuclear FMR1 interacting protein 2	1	QGLETLKPDYSEQK	QGLETLKPDYSEQK	3	QGLETLKPDYSEQK3	8243.45		6443.42
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	QGLFDDDDESDLFK	QGLFDDDDESDLFK	2	QGLFDDDDESDLFK2	8983.58	9818.26	13913.2
A0A8I6ACU9	A0A8I6ACU9	A0A8I6ACU9_RAT	Timm50	Mitochondrial import inner membrane translocase subunit TIM50	1	QGLFFGSLTSR	QGLFFGSLTSR	2	QGLFFGSLTSR2	39520	45360	48840.6
A0A8I6A6H8	A0A8I6A6H8	A0A8I6A6H8_RAT	Serpinb6a	Serpin family B member 6A	1	QGLFLSK	QGLFLSK	1	QGLFLSK1	1910.35	705.47	1265.34
A0A8I6A6H8	A0A8I6A6H8	A0A8I6A6H8_RAT	Serpinb6a	Serpin family B member 6A	1	QGLFLSK	QGLFLSK	2	QGLFLSK2	226275	193924	200756
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	QGLFPNNYVTK	QGLFPNNYVTK	2	QGLFPNNYVTK2	45282.2	44114.8	42189.4
P15650	P15650	ACADL_RAT	Acadl	Long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	QGLLGINIAEK	QGLLGINIAEK	2	QGLLGINIAEK2	51027.2	50048.2	48229.2
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	QGLLPLTFADPSDYNK	QGLLPLTFADPSDYNK	2	QGLLPLTFADPSDYNK2	98650.8	119255	115456
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	QGLLPLTFADPSDYNK	QGLLPLTFADPSDYNK	3	QGLLPLTFADPSDYNK3		3319.89	4548.37
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	QGLMLLQMLSDLHVQESK	QGLMLLQMLSDLHVQESK	3	QGLMLLQMLSDLHVQESK3	43316.3	61953.1	57962.3
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	QGLNNAVALDFDYR	QGLNNAVALDFDYR	2	QGLNNAVALDFDYR2	53583.4	59193.7	51244.6
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	QGLNNAVALDFDYR	QGLNNAVALDFDYR	3	QGLNNAVALDFDYR3	8775.46	6410.05	9371.74
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	QGLPATSDIK	QGLPATSDIK	2	QGLPATSDIK2	63949.7	52133	45901
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	QGLPATSDIKDIDSLMR	QGLPATSDIKDIDSLMR	3	QGLPATSDIKDIDSLMR3	187579	123317	177738
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	QGLPQTIAADCK	QGLPQTIAADC(UniMod:4)K	2	QGLPQTIAADC(UniMod:4)K2	137482	111730	129026
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	QGLPQTIAADCK	QGLPQTIAADC(UniMod:4)K	3	QGLPQTIAADC(UniMod:4)K3	7413.44	4389.78	
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	QGLPQTIAADCKDDLPPNMR	QGLPQTIAADC(UniMod:4)KDDLPPNMR	3	QGLPQTIAADC(UniMod:4)KDDLPPNMR3	432762	397564	359684
Q08850	Q08850	STX4_RAT	Stx4	Syntaxin-4	1	QGLQNLR	QGLQNLR	2	QGLQNLR2	28163.6	24866.2	33796.3
Q08850	Q08850	STX4_RAT	Stx4	Syntaxin-4	1	QGLQNLREEIK	QGLQNLREEIK	3	QGLQNLREEIK3	15199.8	20583.9	14419.5
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	QGLQTTQAHLER	QGLQTTQAHLER	2	QGLQTTQAHLER2	2243.42	3120.29	
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	QGLQTTQAHLER	QGLQTTQAHLER	3	QGLQTTQAHLER3	61159.1	37342.7	52909.5
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	QGLSCNLCK	QGLSC(UniMod:4)NLC(UniMod:4)K	2	QGLSC(UniMod:4)NLC(UniMod:4)K2	7363.74	12982	2794.38
B2RYN0	B2RYN0	B2RYN0_RAT	Pgm3	Phosphoacetylglucosamine mutase	1	QGLSVLLFNDGTEGR	QGLSVLLFNDGTEGR	2	QGLSVLLFNDGTEGR2	7503.57	2847.71	
Q63621	Q63621	IL1AP_RAT	Il1rap	Interleukin-1 receptor accessory protein	1	QGLSYSSLK	QGLSYSSLK	2	QGLSYSSLK2	9478.21	4263.66	13180.9
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	QGLTPFACAMTYK	QGLTPFAC(UniMod:4)AMTYK	2	QGLTPFAC(UniMod:4)AMTYK2	13341.8	22542.1	25450
D3ZZC1	D3ZZC1	D3ZZC1_RAT	Txndc5	protein disulfide-isomerase	1	QGLYELSANNFELHVSQGNHFIK	QGLYELSANNFELHVSQGNHFIK	4	QGLYELSANNFELHVSQGNHFIK4	15900.1	14755.6	9588.7
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	QGLYLVTEMER	QGLYLVTEMER	2	QGLYLVTEMER2	6128.26	8806.93	10184.5
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	QGMEYYR	QGMEYYR	2	QGMEYYR2	41497.4	63365.5	68180.3
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	QGMRPEHAGSLVELAASK	QGMRPEHAGSLVELAASK	3	QGMRPEHAGSLVELAASK3	4438.3	12357	7567.02
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	QGMRPEHAGSLVELAASK	QGMRPEHAGSLVELAASK	4	QGMRPEHAGSLVELAASK4	22315.3	30409.9	25241.6
A0A8I6ALT5	A0A8I6ALT5	A0A8I6ALT5_RAT	Dok2	Docking protein 2	1	QGNEIFQALEK	QGNEIFQALEK	2	QGNEIFQALEK2	33191.6	28655.5	31243.3
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	QGNGPVLVCAPSNIAVDQLTEK	QGNGPVLVC(UniMod:4)APSNIAVDQLTEK	3	QGNGPVLVC(UniMod:4)APSNIAVDQLTEK3	8828.22	5005.63	
P15384	P15384	KCNA3_RAT	Kcna3	Potassium voltage-gated channel subfamily A member 3	1	QGNGQQAMSLAILR	QGNGQQAMSLAILR	2	QGNGQQAMSLAILR2	3730.03	1393.95	7011.77
A0A0G2K0I6	A0A0G2K0I6	A0A0G2K0I6_RAT	Cdh5	Cadherin 5	1	QGNIYNEK	QGNIYNEK	2	QGNIYNEK2	36315.6	35995.6	30868
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	QGNLFDFLR	QGNLFDFLR	2	QGNLFDFLR2	55473.2	42638.5	44618.9
D3ZAI6	D3ZAI6	D3ZAI6_RAT	Nt5dc3	5'-nucleotidase domain containing 3	1	QGNLYEFLK	QGNLYEFLK	2	QGNLYEFLK2	5040.05	5926.84	7744.61
Q4KLF8	Q4KLF8	ARPC5_RAT	Arpc5	Actin-related protein 2/3 complex subunit 5	1	QGNMTAALQAALK	QGNMTAALQAALK	2	QGNMTAALQAALK2	227703	201889	195313
Q4KLF8	Q4KLF8	ARPC5_RAT	Arpc5	Actin-related protein 2/3 complex subunit 5	1	QGNMTAALQAALK	QGNMTAALQAALK	3	QGNMTAALQAALK3	3101.05	9338.5	8344.78
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	QGNPVAPIK	QGNPVAPIK	2	QGNPVAPIK2	93775.2	88995.1	85949.7
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	QGPACESMVLEAMEGAK	QGPAC(UniMod:4)ESMVLEAMEGAK	2	QGPAC(UniMod:4)ESMVLEAMEGAK2	39720.6	19566.5	36202.5
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	QGPACESMVLEAMEGAK	QGPAC(UniMod:4)ESMVLEAMEGAK	3	QGPAC(UniMod:4)ESMVLEAMEGAK3	49326.4	54158.3	42653.7
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	QGPAPTGLPR	QGPAPTGLPR	2	QGPAPTGLPR2	104952	111973	107685
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	QGPEESGLGEGTGTK	QGPEESGLGEGTGTK	2	QGPEESGLGEGTGTK2	2161.66	1015.88	3401.59
A0A8I6G6W8	A0A8I5Y276;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	QGPFPSKPPVPDTDEIWK	QGPFPSKPPVPDTDEIWK	3	QGPFPSKPPVPDTDEIWK3	22816.8	39747.2	27470.3
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	QGPLHGMLINTPYVTK	QGPLHGMLINTPYVTK	3	QGPLHGMLINTPYVTK3	2932.38	1885.36	6440.49
A0A8I5Y8H6	A0A8I5Y8H6	A0A8I5Y8H6_RAT	Psd3	Pleckstrin and Sec7 domain containing 3	1	QGPLHVPESACPVSLGSAK	QGPLHVPESAC(UniMod:4)PVSLGSAK	3	QGPLHVPESAC(UniMod:4)PVSLGSAK3	2653.69	6374.97	
O35370	O35370	O35370_RAT	Thbd	Thrombomodulin	1	QGPNPCPQLCSNTEGGFECR	QGPNPC(UniMod:4)PQLC(UniMod:4)SNTEGGFEC(UniMod:4)R	3	QGPNPC(UniMod:4)PQLC(UniMod:4)SNTEGGFEC(UniMod:4)R3	7066.63	4306.83	8980.31
A0A0G2K012	A0A0G2K012	A0A0G2K012_RAT	Ubxn6	UBX domain protein 6	1	QGPTDEAQMAAAAALAR	QGPTDEAQMAAAAALAR	3	QGPTDEAQMAAAAALAR3		1770.98	4031.61
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	QGPVDLTLK	QGPVDLTLK	2	QGPVDLTLK2	49735.4	47366.4	61502.2
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	QGPVSSGR	QGPVSSGR	2	QGPVSSGR2			87509.4
B2GUZ7	B2GUZ7	B2GUZ7_RAT	Tbcc	Tubulin folding cofactor C	1	QGQAALAQLQSVLTER	QGQAALAQLQSVLTER	2	QGQAALAQLQSVLTER2	5225.33	4135.86	4695.03
B2GUZ7	B2GUZ7	B2GUZ7_RAT	Tbcc	Tubulin folding cofactor C	1	QGQAALAQLQSVLTER	QGQAALAQLQSVLTER	3	QGQAALAQLQSVLTER3	3022.54	5424.11	4222.55
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	QGQDAIPPPDPGEQIFNLPK	QGQDAIPPPDPGEQIFNLPK	3	QGQDAIPPPDPGEQIFNLPK3	270293	295463	351603
P52555	P52555	ERP29_RAT	Erp29	Endoplasmic reticulum resident protein 29	1	QGQDGLSGVK	QGQDGLSGVK	2	QGQDGLSGVK2	15085.5	17505.2	15204.9
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	QGQEEIVTLHAEIK	QGQEEIVTLHAEIK	3	QGQEEIVTLHAEIK3	4445.78	1595.77	6600.06
Q499N6	Q499N6	UBXN1_RAT	Ubxn1	UBX domain-containing protein 1	1	QGQELSAAR	QGQELSAAR	2	QGQELSAAR2	11309.5	12891.7	10754.1
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	QGQETAVAPSLVAPALSK	QGQETAVAPSLVAPALSK	2	QGQETAVAPSLVAPALSK2	42753.6	36639.9	39761.1
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	QGQETAVAPSLVAPALSK	QGQETAVAPSLVAPALSK	3	QGQETAVAPSLVAPALSK3	10180.8	11218.2	9766.68
Q66HR2	Q66HR2	MARE1_RAT	Mapre1	Microtubule-associated protein RP/EB family member 1	1	QGQETAVAPSLVAPALSKPK	QGQETAVAPSLVAPALSKPK	3	QGQETAVAPSLVAPALSKPK3	883124	779869	926330
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	QGQGQLVTCSGAFK	QGQGQLVTC(UniMod:4)SGAFK	2	QGQGQLVTC(UniMod:4)SGAFK2	49962.1	46207.4	45844.3
F7FMS0	F7FMS0	F7FMS0_RAT	Mst1	Macrophage stimulating 1	1	QGQHFCGGSLVK	QGQHFC(UniMod:4)GGSLVK	3	QGQHFC(UniMod:4)GGSLVK3	6086.43	2641.24	8515.25
P42667	P42667	SC11A_RAT	Sec11a	Signal peptidase complex catalytic subunit SEC11A	1	QGQHWLEK	QGQHWLEK	2	QGQHWLEK2	7594.5	4156.93	4596.77
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	QGQIDNQTR	QGQIDNQTR	2	QGQIDNQTR2			125469
P11960	P11960	ODBA_RAT	Bckdha	2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment)	1	QGQIINPSEDPHLPQEEVLK	QGQIINPSEDPHLPQEEVLK	3	QGQIINPSEDPHLPQEEVLK3	19554.3	12974.9	19486
P36372	P36372	TAP2_RAT	Tap2	Antigen peptide transporter 2	1	QGQLVEHDQLR	QGQLVEHDQLR	3	QGQLVEHDQLR3	7451.83	8235.28	2252.47
P36372	P36372	TAP2_RAT	Tap2	Antigen peptide transporter 2	1	QGQLVEHDQLRDEQDVYAHLVQQR	QGQLVEHDQLRDEQDVYAHLVQQR	4	QGQLVEHDQLRDEQDVYAHLVQQR4	8490.5	7324.62	6652.42
B2RZB5	B2RZB5	B2RZB5_RAT	Chmp2a	Charged multivesicular body protein 2A	1	QGQMDAVR	QGQMDAVR	2	QGQMDAVR2	38805.6	23706.4	43165
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	QGQMIVFHLIELLK	QGQMIVFHLIELLK	3	QGQMIVFHLIELLK3	5377.59	5293.79	5275.5
A0A8I5ZXX2	A0A8I5ZXX2	A0A8I5ZXX2_RAT	Kdm3b	Lysine-specific demethylase	1	QGQPVLVSGVHK	QGQPVLVSGVHK	3	QGQPVLVSGVHK3		2718.56	3474.9
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	QGQQTEVREPTPTPEDTSQDVTTVTLLLR	QGQQTEVREPTPTPEDTSQDVTTVTLLLR	4	QGQQTEVREPTPTPEDTSQDVTTVTLLLR4		5889.2	
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	QGQSVLWK	QGQSVLWK	2	QGQSVLWK2	12570.9	13369.5	
A2RUW1	A2RUW1	TOLIP_RAT	Tollip	Toll-interacting protein	1	QGQVEDEWYSLSGR	QGQVEDEWYSLSGR	2	QGQVEDEWYSLSGR2	26186.8	27739.9	16534.2
A2RUW1	A2RUW1	TOLIP_RAT	Tollip	Toll-interacting protein	1	QGQVEDEWYSLSGR	QGQVEDEWYSLSGR	3	QGQVEDEWYSLSGR3	9268.17	8394.92	6919.55
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	QGQYSPMAIEEQVAVIYAGVR	QGQYSPMAIEEQVAVIYAGVR	3	QGQYSPMAIEEQVAVIYAGVR3	51354.8	53291.8	58399.8
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	QGSATVGLK	QGSATVGLK	1	QGSATVGLK1	8794.04	11288.2	5208.95
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	QGSATVGLK	QGSATVGLK	2	QGSATVGLK2	2.04996e+06	2.08701e+06	2.23163e+06
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QGSFSEDVISHK	QGSFSEDVISHK	3	QGSFSEDVISHK3	19245.2	14357.3	27757.9
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	QGSFTIDKPSSNIPIELIPHINK	QGSFTIDKPSSNIPIELIPHINK	4	QGSFTIDKPSSNIPIELIPHINK4	10224.1	6127.55	10026.7
Q63768	Q63768	CRK_RAT	Crk	Adapter molecule crk	1	QGSGVILR	QGSGVILR	2	QGSGVILR2	20063.2	23946.6	26215.4
F1LWX6	F1LWX6	F1LWX6_RAT	Poln	DNA polymerase nu	1	QGSLNAVNTK	QGSLNAVNTK	2	QGSLNAVNTK2		942.692	1698.48
B2RYN7	B2RYN7	SPAST_RAT	Spast	Spastin	1	QGSPLTQK	QGSPLTQK	2	QGSPLTQK2		4632.83	
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	QGSPTPALPEK	QGSPTPALPEK	2	QGSPTPALPEK2	6476	5909.62	11098.3
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	QGSSPGPMSAPAPGSAR	QGSSPGPMSAPAPGSAR	2	QGSSPGPMSAPAPGSAR2	9427.95	17060.5	8795.69
P13838	P13838	LEUK_RAT	Spn	Leukosialin (Fragment)	1	QGSVALEELKPGTGPNLK	QGSVALEELKPGTGPNLK	2	QGSVALEELKPGTGPNLK2	5944.35	7270.59	7754.24
P13838	P13838	LEUK_RAT	Spn	Leukosialin (Fragment)	1	QGSVALEELKPGTGPNLK	QGSVALEELKPGTGPNLK	3	QGSVALEELKPGTGPNLK3	280396	292986	284814
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	QGSVTTFLAK	QGSVTTFLAK	2	QGSVTTFLAK2	89904.6	88163.8	92652.1
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	QGTDPISQTK	QGTDPISQTK	2	QGTDPISQTK2	25164.5	27289.6	26814.4
P13086	P13086	SUCA_RAT	Suclg1	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial	1	QGTFHSQQALEYGTK	QGTFHSQQALEYGTK	2	QGTFHSQQALEYGTK2	3684.48	3031.96	3699
P13086	P13086	SUCA_RAT	Suclg1	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial	1	QGTFHSQQALEYGTK	QGTFHSQQALEYGTK	3	QGTFHSQQALEYGTK3	94355.9	72107.2	89859.1
P49432	P49432	ODPB_RAT	Pdhb	Pyruvate dehydrogenase E1 component subunit beta, mitochondrial	1	QGTHITVVAHSR	QGTHITVVAHSR	3	QGTHITVVAHSR3	10368.8	9670.58	
Q5XIT9	Q5XIT9	MCCB_RAT	Mccc2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	1	QGTIFLAGPPLVK	QGTIFLAGPPLVK	2	QGTIFLAGPPLVK2	16905.6	12696.9	14231
B2GUZ6	B2GUZ6	B2GUZ6_RAT	Rtn4ip1	Reticulon 4 interacting protein 1	1	QGTLSEFVVVSGNEVSHKPK	QGTLSEFVVVSGNEVSHKPK	4	QGTLSEFVVVSGNEVSHKPK4		8420.97	
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	QGTPMCVPSK	QGTPMC(UniMod:4)VPSK	2	QGTPMC(UniMod:4)VPSK2	48579.1	54067.8	58686.1
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	QGTYGGYFR	QGTYGGYFR	2	QGTYGGYFR2	114391	108127	130975
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	QGVDIEAAR	QGVDIEAAR	2	QGVDIEAAR2	167459	155711	169024
Q04970	Q04970;A0A8I6AHV4;P20171	RASN_RAT	Nras	GTPase NRas	0	QGVEDAFYTLVR	QGVEDAFYTLVR	2	QGVEDAFYTLVR2	30356.6	33912.8	42598.9
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	QGVLHLLQSVNMDSDQFQLGR	QGVLHLLQSVNMDSDQFQLGR	3	QGVLHLLQSVNMDSDQFQLGR3	16492	12019.5	9229.18
Q6AXX6	Q6AXX6	PXL2A_RAT	Prxl2a	Peroxiredoxin-like 2A	1	QGVLLEHR	QGVLLEHR	2	QGVLLEHR2	5739	2906.24	6656.55
Q5I0H3	Q5I0H3	SUMO1_RAT	Sumo1	Small ubiquitin-related modifier 1	1	QGVPMNSLR	QGVPMNSLR	2	QGVPMNSLR2	40526.6	28673.7	35798.3
Q5XFW6	Q5XFW6	WDR6_RAT	Wdr6	WD repeat-containing protein 6	1	QGVTSVTCHGGYVYSTGR	QGVTSVTC(UniMod:4)HGGYVYSTGR	3	QGVTSVTC(UniMod:4)HGGYVYSTGR3	11731.2	6082.9	13640.6
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	QGVYSICLQLAR	QGVYSIC(UniMod:4)LQLAR	2	QGVYSIC(UniMod:4)LQLAR2	3079.1	4627.4	3718.84
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	QGWEPEVPCLK	QGWEPEVPC(UniMod:4)LK	2	QGWEPEVPC(UniMod:4)LK2	764793	653406	615210
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	QGWGEPLEATVITTEK	QGWGEPLEATVITTEK	2	QGWGEPLEATVITTEK2	2187.82	3592.58	
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	QGWITVGDLEGCIHYK	QGWITVGDLEGC(UniMod:4)IHYK	3	QGWITVGDLEGC(UniMod:4)IHYK3	22964.4	28928.9	18584.7
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	QGWTTVGDLEGCVHYK	QGWTTVGDLEGC(UniMod:4)VHYK	3	QGWTTVGDLEGC(UniMod:4)VHYK3	9948.29	3357.46	4859.84
F1LP90	F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	1	QGWTTVGDMEGCGHYR	QGWTTVGDMEGC(UniMod:4)GHYR	3	QGWTTVGDMEGC(UniMod:4)GHYR3		2549.12	3615.47
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	QGYACEVCAFSCHVSCK	QGYAC(UniMod:4)EVC(UniMod:4)AFSC(UniMod:4)HVSC(UniMod:4)K	3	QGYAC(UniMod:4)EVC(UniMod:4)AFSC(UniMod:4)HVSC(UniMod:4)K3	9735.84	14439	9683.66
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	QGYILSGIR	QGYILSGIR	2	QGYILSGIR2	65175.8	65517.4	62588
Q9JJ05	Q9JJ05	C1GLT_RAT	C1galt1	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1	1	QGYMSGGAGYVLSK	QGYMSGGAGYVLSK	2	QGYMSGGAGYVLSK2	12271.1	11568.1	10657
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	QGYPEGYYNSK	QGYPEGYYNSK	2	QGYPEGYYNSK2	10610	8591.93	4178.16
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	QGYQLAEDGHTCTDIDECAQGAGILCTFR	QGYQLAEDGHTC(UniMod:4)TDIDEC(UniMod:4)AQGAGILC(UniMod:4)TFR	4	QGYQLAEDGHTC(UniMod:4)TDIDEC(UniMod:4)AQGAGILC(UniMod:4)TFR4	12149.9	12304.5	10673.1
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	QGYQLMEGSQALLSFTAVCQHDGTWHR	QGYQLMEGSQALLSFTAVC(UniMod:4)QHDGTWHR	4	QGYQLMEGSQALLSFTAVC(UniMod:4)QHDGTWHR4	223485	135108	129744
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	QGYTLSCNLLHHLLR	QGYTLSC(UniMod:4)NLLHHLLR	4	QGYTLSC(UniMod:4)NLLHHLLR4	18913.1	20405.7	15756.8
P61314	D3ZF52;P61314;A0A8I5ZY58;A0A8I6A471	RL15_RAT	Rpl15	Large ribosomal subunit protein eL15	0	QGYVIYR	QGYVIYR	2	QGYVIYR2	19898.3	40234.3	17629.2
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	QGYVLPLSTTLSEVSVQCNR	QGYVLPLSTTLSEVSVQC(UniMod:4)NR	3	QGYVLPLSTTLSEVSVQC(UniMod:4)NR3	35104.7	17592.7	24786.8
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	QGYVTNTGEISGIITCLQDGWSPR	QGYVTNTGEISGIITC(UniMod:4)LQDGWSPR	3	QGYVTNTGEISGIITC(UniMod:4)LQDGWSPR3	34623.1	30951.7	26532
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QHADHLALNEEIINR	QHADHLALNEEIINR	4	QHADHLALNEEIINR4	15411.7	20961.9	14827.6
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QHADHLALNEEIINRK	QHADHLALNEEIINRK	4	QHADHLALNEEIINRK4	4791.38	8209.18	5652.84
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	QHASLTGTQALPPLFSLGYHQSR	QHASLTGTQALPPLFSLGYHQSR	3	QHASLTGTQALPPLFSLGYHQSR3	214729	229455	180655
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	QHASLTGTQALPPLFSLGYHQSR	QHASLTGTQALPPLFSLGYHQSR	4	QHASLTGTQALPPLFSLGYHQSR4	597183	657981	557030
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	QHAVINYDASMDEHLVK	QHAVINYDASMDEHLVK	4	QHAVINYDASMDEHLVK4	6393.28	8338.53	8622.07
P23785	P23785	GRN_RAT	Grn	Progranulin	1	QHCCPAGYTCNVK	QHC(UniMod:4)C(UniMod:4)PAGYTC(UniMod:4)NVK	2	QHC(UniMod:4)C(UniMod:4)PAGYTC(UniMod:4)NVK2	4799.06	4171.43	3229.18
P23785	P23785	GRN_RAT	Grn	Progranulin	1	QHCCPAGYTCNVK	QHC(UniMod:4)C(UniMod:4)PAGYTC(UniMod:4)NVK	3	QHC(UniMod:4)C(UniMod:4)PAGYTC(UniMod:4)NVK3	33398.3	29341.7	28769.2
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	QHCEPTQECEEVQENCGNDFQCETGR	QHC(UniMod:4)EPTQEC(UniMod:4)EEVQENC(UniMod:4)GNDFQC(UniMod:4)ETGR	4	QHC(UniMod:4)EPTQEC(UniMod:4)EEVQENC(UniMod:4)GNDFQC(UniMod:4)ETGR4	90737.4	72497.4	67629.4
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	QHDAASLLK	QHDAASLLK	2	QHDAASLLK2	6656.98	8717.29	
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	QHDLGHMMR	QHDLGHMMR	2	QHDLGHMMR2	2.92085e+06	3.5532e+06	2.92681e+06
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	QHEAERQEEELR	QHEAERQEEELR	2	QHEAERQEEELR2	4243.13		
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	QHEAERQEEELR	QHEAERQEEELR	3	QHEAERQEEELR3	20312.4		25438.9
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	QHEAERQEEELR	QHEAERQEEELR	4	QHEAERQEEELR4	17760		29126.8
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	QHEDQQVVNK	QHEDQQVVNK	2	QHEDQQVVNK2			19852.4
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	QHEDQQVVNK	QHEDQQVVNK	3	QHEDQQVVNK3			58188.3
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	QHEEGQEGQEETSRAPDLSPEGLLSLK	QHEEGQEGQEETSRAPDLSPEGLLSLK	4	QHEEGQEGQEETSRAPDLSPEGLLSLK4	8626.85	9396.09	9789.58
Q5RKH6	Q5RKH6	OS9_RAT	Os9	Protein OS-9	1	QHEEKVTEEVQDTDHQVWSGSK	QHEEKVTEEVQDTDHQVWSGSK	4	QHEEKVTEEVQDTDHQVWSGSK4			8635.57
Q4V794	Q4V794	Q4V794_RAT	Vps37a	VPS37A subunit of ESCRT-I	1	QHELSESCSASALQAR	QHELSESC(UniMod:4)SASALQAR	3	QHELSESC(UniMod:4)SASALQAR3	8147.78	6682.6	3417.22
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	QHESMQELEFR	QHESMQELEFR	3	QHESMQELEFR3	29051.7	31955.3	21416
P14270	P14270	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	1	QHEVEIPSPTQK	QHEVEIPSPTQK	2	QHEVEIPSPTQK2	5194.88	1409.08	2847.82
P14270	P14270	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	1	QHEVEIPSPTQK	QHEVEIPSPTQK	3	QHEVEIPSPTQK3	14263.7	13204.6	30433.8
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	QHFIQEEQILEIDCTMLTPEPVLK	QHFIQEEQILEIDC(UniMod:4)TMLTPEPVLK	3	QHFIQEEQILEIDC(UniMod:4)TMLTPEPVLK3	15837.3	17958.7	10345.5
A0A8I5Y9M9	A0A8I5Y9M9	A0A8I5Y9M9_RAT	Sri	Sorcin	1	QHFISFDSDR	QHFISFDSDR	2	QHFISFDSDR2	21254.1	10658	12235.7
A0A8I5Y9M9	A0A8I5Y9M9	A0A8I5Y9M9_RAT	Sri	Sorcin	1	QHFISFDSDR	QHFISFDSDR	3	QHFISFDSDR3	53542.2	58632.4	50937.4
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	QHFPATPLLDYALEVEK	QHFPATPLLDYALEVEK	3	QHFPATPLLDYALEVEK3	27424.5	18614.4	14557.8
A0A8I6AEZ7	A0A8I6AEZ7	A0A8I6AEZ7_RAT	Crlf3	Cytokine receptor-like factor 3	1	QHFSDLK	QHFSDLK	2	QHFSDLK2	31774.7	27234.9	22159.7
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	QHFSVGGWR	QHFSVGGWR	2	QHFSVGGWR2	70475.2	73427.7	76995.1
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	QHFYELSLEYVCK	QHFYELSLEYVC(UniMod:4)K	3	QHFYELSLEYVC(UniMod:4)K3	23831.3	15750.7	15204.7
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	QHGDVVSAIK	QHGDVVSAIK	2	QHGDVVSAIK2	39543.6	38714.2	32721.8
D4A183	D4A183	D4A183_RAT	Vnn3	Vanin 3	1	QHGFPAEVDWSAYAR	QHGFPAEVDWSAYAR	3	QHGFPAEVDWSAYAR3	6406.82		8184.2
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	QHGINVQSIADVHPIR	QHGINVQSIADVHPIR	4	QHGINVQSIADVHPIR4	7573.4	12954.7	18753.1
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	QHGPNVCAVQK	QHGPNVC(UniMod:4)AVQK	2	QHGPNVC(UniMod:4)AVQK2	35528.5	93043.2	65415.5
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	QHGPNVCAVQK	QHGPNVC(UniMod:4)AVQK	3	QHGPNVC(UniMod:4)AVQK3	96594.4	426086	327507
B0BN19	B0BN19	B0BN19_RAT	Rab22a	RAB22A, member RAS oncogene family	1	QHGPPSIVVAIAGNK	QHGPPSIVVAIAGNK	3	QHGPPSIVVAIAGNK3	16541.2	5565.26	7238.61
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	QHHLGVWPLLPGSFK	QHHLGVWPLLPGSFK	2	QHHLGVWPLLPGSFK2	356287	453373	352595
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	QHHLGVWPLLPGSFK	QHHLGVWPLLPGSFK	3	QHHLGVWPLLPGSFK3	7.22346e+06	8.72383e+06	7.69158e+06
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	QHHLGVWPLLPGSFK	QHHLGVWPLLPGSFK	4	QHHLGVWPLLPGSFK4	3.97545e+06	4.95204e+06	4.86874e+06
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	QHIELALER	QHIELALER	2	QHIELALER2	23802.8	21093.3	20644.8
B1WBV4	B1WBV4	B1WBV4_RAT	Plekhf2	Pleckstrin homology and FYVE domain containing 2	1	QHIIPLENVTIDSIK	QHIIPLENVTIDSIK	2	QHIIPLENVTIDSIK2	2787.84	4009.5	
B1WBV4	B1WBV4	B1WBV4_RAT	Plekhf2	Pleckstrin homology and FYVE domain containing 2	1	QHIIPLENVTIDSIK	QHIIPLENVTIDSIK	3	QHIIPLENVTIDSIK3	6033.35	7519.58	9260.41
B1WBV4	B1WBV4	B1WBV4_RAT	Plekhf2	Pleckstrin homology and FYVE domain containing 2	1	QHIIPLENVTIDSIKDEGELR	QHIIPLENVTIDSIKDEGELR	3	QHIIPLENVTIDSIKDEGELR3	19501.1	23552.4	21570.8
B1WBV4	B1WBV4	B1WBV4_RAT	Plekhf2	Pleckstrin homology and FYVE domain containing 2	1	QHIIPLENVTIDSIKDEGELR	QHIIPLENVTIDSIKDEGELR	4	QHIIPLENVTIDSIKDEGELR4	87280.4	96414	111039
Q66H39	Q66H39	ABCF3_RAT	Abcf3	ATP-binding cassette sub-family F member 3	1	QHIQVFIDR	QHIQVFIDR	3	QHIQVFIDR3	4930.79	4567.29	3842.28
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	QHIYDGALR	QHIYDGALR	2	QHIYDGALR2	8548.74		8454.01
Q793F9	Q793F9	VPS4A_RAT	Vps4a	Vacuolar protein sorting-associated protein 4A	1	QHKPSIIFIDEVDSLCGSR	QHKPSIIFIDEVDSLC(UniMod:4)GSR	4	QHKPSIIFIDEVDSLC(UniMod:4)GSR4	9392.81	19280.1	14528.5
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	QHLAAWIEDQNWR	QHLAAWIEDQNWR	3	QHLAAWIEDQNWR3	12382	15983.3	13686.6
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	QHLANQQALGR	QHLANQQALGR	3	QHLANQQALGR3	12831.1	7530.38	9206.72
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	QHLDGVLDFLPL	QHLDGVLDFLPL	2	QHLDGVLDFLPL2		12108.9	18948.8
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	QHLEITGGQVR	QHLEITGGQVR	2	QHLEITGGQVR2	7703.47	7047.98	4787.27
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	QHLEITGGQVR	QHLEITGGQVR	3	QHLEITGGQVR3	51369.5	33679.4	44141.7
Q920J4	Q920J4	TXNL1_RAT	Txnl1	Thioredoxin-like protein 1	1	QHLENDPGSNEDTDIPK	QHLENDPGSNEDTDIPK	2	QHLENDPGSNEDTDIPK2	10176.9	14286.8	7573.46
Q920J4	Q920J4	TXNL1_RAT	Txnl1	Thioredoxin-like protein 1	1	QHLENDPGSNEDTDIPK	QHLENDPGSNEDTDIPK	3	QHLENDPGSNEDTDIPK3	82856.1	86167	86220.2
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	QHLEPFVGVLSSHFK	QHLEPFVGVLSSHFK	3	QHLEPFVGVLSSHFK3	8929.1	10878	8044.05
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	QHLEPFVGVLSSHFK	QHLEPFVGVLSSHFK	4	QHLEPFVGVLSSHFK4	7938.45	7715.98	7294.45
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	QHLFYGQYEGK	QHLFYGQYEGK	2	QHLFYGQYEGK2	2353.08	9679.23	1028.32
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	QHLFYGQYEGK	QHLFYGQYEGK	3	QHLFYGQYEGK3	37416.4	23449.4	11059.3
F1LW77	F1LW77	F1LW77_RAT	Rab33b	RAB33B, member RAS oncogene family	1	QHLLANDIPR	QHLLANDIPR	3	QHLLANDIPR3	3826.29		4184.2
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	QHLNLNNAEQLCR	QHLNLNNAEQLC(UniMod:4)R	2	QHLNLNNAEQLC(UniMod:4)R2	3272.75	6992.61	7016.79
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	QHLNLNNAEQLCR	QHLNLNNAEQLC(UniMod:4)R	3	QHLNLNNAEQLC(UniMod:4)R3	70180.9	90191	107659
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	QHLQATGVSLGGVDLTVR	QHLQATGVSLGGVDLTVR	3	QHLQATGVSLGGVDLTVR3	15208.6	9960.72	10631.6
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	QHLSEYLVLFQENQDVAWLDK	QHLSEYLVLFQENQDVAWLDK	3	QHLSEYLVLFQENQDVAWLDK3	8391.69	6655.61	11072.4
B2RYN3	B2RYN3	B2RYN3_RAT	Eef1e1	Eukaryotic translation elongation factor 1 epsilon 1	1	QHLSSVVFIK	QHLSSVVFIK	3	QHLSSVVFIK3	32219.9	29772.1	26424.1
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QHLVEVR	QHLVEVR	2	QHLVEVR2	50102.3	54593.2	30458.3
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	QHLVPGAPFLLQALVR	QHLVPGAPFLLQALVR	2	QHLVPGAPFLLQALVR2	9.12396e+06	1.04639e+07	7.14478e+06
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	QHLVPGAPFLLQALVR	QHLVPGAPFLLQALVR	3	QHLVPGAPFLLQALVR3	1.91214e+07	3.82615e+07	3.30616e+07
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	QHLVPGAPFLLQALVR	QHLVPGAPFLLQALVR	4	QHLVPGAPFLLQALVR4	136628	136222	103579
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	QHLVPGAPFLLQALVREMSGSEASDVPVK	QHLVPGAPFLLQALVREMSGSEASDVPVK	4	QHLVPGAPFLLQALVREMSGSEASDVPVK4	30292.7	21648.8	21575.5
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	QHMENEMAHYACDCWDAESK	QHMENEMAHYAC(UniMod:4)DC(UniMod:4)WDAESK	4	QHMENEMAHYAC(UniMod:4)DC(UniMod:4)WDAESK4	5763.77	8018.68	16370
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	QHNILASVGEDEEGINPLVK	QHNILASVGEDEEGINPLVK	3	QHNILASVGEDEEGINPLVK3	6868.23	11017.6	9599.59
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	QHPDPDSTVK	QHPDPDSTVK	2	QHPDPDSTVK2	6473.87		7874.88
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	QHPLPPPAQNQNQVR	QHPLPPPAQNQNQVR	2	QHPLPPPAQNQNQVR2	55423.7	32880.8	41323.6
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	QHPLPPPAQNQNQVR	QHPLPPPAQNQNQVR	3	QHPLPPPAQNQNQVR3	442686	411914	419928
P30349	P30349	LKHA4_RAT	Lta4h	Leukotriene A-4 hydrolase	1	QHPYLFSQCQAIHCR	QHPYLFSQC(UniMod:4)QAIHC(UniMod:4)R	3	QHPYLFSQC(UniMod:4)QAIHC(UniMod:4)R3	28920.5	6268.48	
P30349	P30349	LKHA4_RAT	Lta4h	Leukotriene A-4 hydrolase	1	QHPYLFSQCQAIHCR	QHPYLFSQC(UniMod:4)QAIHC(UniMod:4)R	4	QHPYLFSQC(UniMod:4)QAIHC(UniMod:4)R4	32422.5	5349.9	4263.61
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	QHPYTFPGGSGTVFAR	QHPYTFPGGSGTVFAR	2	QHPYTFPGGSGTVFAR2	22844.4	17748.9	13103.3
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	QHPYTFPGGSGTVFAR	QHPYTFPGGSGTVFAR	3	QHPYTFPGGSGTVFAR3	133113	136498	120092
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	QHQASDEIR	QHQASDEIR	2	QHQASDEIR2			11461.2
Q80Z70	Q80Z70	SE1L1_RAT	Sel1l	Protein sel-1 homolog 1	1	QHQDIPVPRPPGPR	QHQDIPVPRPPGPR	4	QHQDIPVPRPPGPR4	24474	14749	20122.4
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	QHQEDAWVIGSVVECPEDSPR	QHQEDAWVIGSVVEC(UniMod:4)PEDSPR	3	QHQEDAWVIGSVVEC(UniMod:4)PEDSPR3	2593.72	3667.9	7935.6
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	QHQEVIAIYR	QHQEVIAIYR	2	QHQEVIAIYR2	5453.29	4888.35	3879.23
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	QHQEVIAIYR	QHQEVIAIYR	3	QHQEVIAIYR3	43722.7	37962.5	34622.9
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	QHQLDMEALK	QHQLDMEALK	3	QHQLDMEALK3	25024	20915.6	27010.4
A0A0G2JZH8	A0A0G2JZH8	A0A0G2JZH8_RAT	Pdhx	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	QHQLITVTMSSDSR	QHQLITVTMSSDSR	3	QHQLITVTMSSDSR3	6980.75	11573.9	14590.1
D3ZWA8	D3ZWA8	D3ZWA8_RAT	Appl1	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1	1	QHQTMMHYFCALNTLQYK	QHQTMMHYFC(UniMod:4)ALNTLQYK	4	QHQTMMHYFC(UniMod:4)ALNTLQYK4			3530.2
D3ZT64	D3ZT64	D3ZT64_RAT	Atg2a	Autophagy related 2A	1	QHQVLMEIQLSK	QHQVLMEIQLSK	3	QHQVLMEIQLSK3	4745.19	1982.52	1346.47
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	QHSGEAISSK	QHSGEAISSK	2	QHSGEAISSK2	870.884		3885.3
Q62762	Q62762	KC1G2_RAT	Csnk1g2	Casein kinase I isoform gamma-2	1	QHSIHIIDFGLAK	QHSIHIIDFGLAK	3	QHSIHIIDFGLAK3	1437.02		891.57
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	QHSLLQEELR	QHSLLQEELR	2	QHSLLQEELR2	4794.97	6034.35	
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	QHSLLQEELRR	QHSLLQEELRR	3	QHSLLQEELRR3	52216.2	64447.1	73007.1
P05712	P05712	RAB2A_RAT	Rab2a	Ras-related protein Rab-2A	1	QHSNSNMVIMLIGNK	QHSNSNMVIMLIGNK	2	QHSNSNMVIMLIGNK2	12370.5	15470.4	15592.2
P05712	P05712	RAB2A_RAT	Rab2a	Ras-related protein Rab-2A	1	QHSNSNMVIMLIGNK	QHSNSNMVIMLIGNK	3	QHSNSNMVIMLIGNK3	110836	97892.3	138011
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	QHSQDLAFVSMLNDIAATPTAAMPFR	QHSQDLAFVSMLNDIAATPTAAMPFR	3	QHSQDLAFVSMLNDIAATPTAAMPFR3	11196.1	8076.06	12658.6
D3ZFK6	D3ZFK6	D3ZFK6_RAT	Atg16l1	Autophagy related 16-like 1	1	QHSSSINAVAWAPSGLHVVSVDK	QHSSSINAVAWAPSGLHVVSVDK	3	QHSSSINAVAWAPSGLHVVSVDK3	5957.02		
D3ZFK6	D3ZFK6	D3ZFK6_RAT	Atg16l1	Autophagy related 16-like 1	1	QHSSSINAVAWAPSGLHVVSVDK	QHSSSINAVAWAPSGLHVVSVDK	4	QHSSSINAVAWAPSGLHVVSVDK4	1416.73	7408.78	10619.9
Q3B7V5	Q3B7V5	Q3B7V5_RAT	Rab2b	RAB2B, member RAS oncogene family	1	QHSSSNMVIMLIGNK	QHSSSNMVIMLIGNK	3	QHSSSNMVIMLIGNK3	6194.29	6094.72	6345.87
D4A3E1	D4A3E1	D4A3E1_RAT	Hnrnpll	Heterogeneous nuclear ribonucleoprotein L-like	1	QHSVVPSQIFELEDGTSSYK	QHSVVPSQIFELEDGTSSYK	3	QHSVVPSQIFELEDGTSSYK3		3083.53	6286.66
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	QHTFVETESVR	QHTFVETESVR	2	QHTFVETESVR2	19048.8	16179	19144.9
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	QHTFVETESVR	QHTFVETESVR	3	QHTFVETESVR3	153327	134888	128769
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QHTILMSDK	QHTILMSDK	2	QHTILMSDK2	5292.19	7151.97	10186.7
O70467	O70467	ANM3_RAT	Prmt3	Protein arginine N-methyltransferase 3	1	QHTPCLFCDR	QHTPC(UniMod:4)LFC(UniMod:4)DR	3	QHTPC(UniMod:4)LFC(UniMod:4)DR3	8979.81	19549.7	9489.79
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	QHTSAFVPSSGR	QHTSAFVPSSGR	3	QHTSAFVPSSGR3		59606.1	50468.2
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	QHTVTFSAESSR	QHTVTFSAESSR	3	QHTVTFSAESSR3	5376.52	9594.75	5087.05
O55004	O55004	RNAS4_RAT	Rnase4	Ribonuclease 4	1	QHVDPEGTGGSDNYCNVMMQR	QHVDPEGTGGSDNYC(UniMod:4)NVMMQR	3	QHVDPEGTGGSDNYC(UniMod:4)NVMMQR3	13218.1	8063.82	20430.2
Q99MM4	Q99MM4	TRAD1_RAT	Trafd1	TRAF-type zinc finger domain-containing protein 1	1	QHVETECPLR	QHVETEC(UniMod:4)PLR	3	QHVETEC(UniMod:4)PLR3	9640.85	9277.82	8450.28
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	QHVLLFAVFDESK	QHVLLFAVFDESK	2	QHVLLFAVFDESK2	915512	939337	874970
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	QHVLLFAVFDESK	QHVLLFAVFDESK	3	QHVLLFAVFDESK3	94575.9	1.37755e+06	1.15994e+06
B1PLB1	B1PLB1	B1PLB1_RAT	Cd34	CD34 molecule	1	QHVVADTEL	QHVVADTEL	2	QHVVADTEL2	61750.1	62214.8	49423.1
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	QHVVYGPWNLPQTGYSHLSR	QHVVYGPWNLPQTGYSHLSR	3	QHVVYGPWNLPQTGYSHLSR3	423088	327786	270181
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	QHVVYGPWNLPQTGYSHLSR	QHVVYGPWNLPQTGYSHLSR	4	QHVVYGPWNLPQTGYSHLSR4	1.59219e+06	1.5164e+06	1.33138e+06
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	QHWEDAVR	QHWEDAVR	2	QHWEDAVR2	36840.5	32959	36410.8
Q9WTN5	Q9WTN5	TPC1_RAT	Tpcn1	Two pore calcium channel protein 1	1	QHWFDELPR	QHWFDELPR	3	QHWFDELPR3	3367.27	2111.03	2649.82
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	QHWVIFK	QHWVIFK	1	QHWVIFK1	11539.3	9904.31	8205.38
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	QHWVIFK	QHWVIFK	2	QHWVIFK2	119834	120312	120130
P19804	A0A8I6A4T4;P19804	NDKB_RAT	Nme2	Nucleoside diphosphate kinase B	0	QHYIDLK	QHYIDLK	2	QHYIDLK2	6510		5730.11
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	QIAASSQESVGR	QIAASSQESVGR	2	QIAASSQESVGR2	17312.2	11698.1	16582.3
P13221	P13221	AATC_RAT	Got1	Aspartate aminotransferase, cytoplasmic	1	QIAAVMK	QIAAVMK	2	QIAAVMK2	18680	18300.6	27153.7
P52287	P52287	GBB3_RAT	Gnb3	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3	1	QIADARK	QIADARK	2	QIADARK2			103971
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	QIADVER	QIADVER	2	QIADVER2	134027	108223	130222
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	QIAEAVR	QIAEAVR	2	QIAEAVR2	50322.1	39921.9	31428
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	QIAELNQR	QIAELNQR	2	QIAELNQR2	15172.9	11427.3	7033.48
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	QIALAVLSTELVVR	QIALAVLSTELVVR	2	QIALAVLSTELVVR2	2222.6		2969.01
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	QIANELNSSCR	QIANELNSSC(UniMod:4)R	2	QIANELNSSC(UniMod:4)R2	11508.3	24061.3	8982.26
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	QIAQEIIK	QIAQEIIK	2	QIAQEIIK2	59536.9	32184.4	47255.2
Q08851	Q08851	STX5_RAT	Stx5	Syntaxin-5	1	QIAQLQDFVR	QIAQLQDFVR	2	QIAQLQDFVR2	31256.1	37914	26141.7
Q62796	Q62796	RBP1_RAT	Ralbp1	RalA-binding protein 1	1	QIASEKEEIDR	QIASEKEEIDR	3	QIASEKEEIDR3	7489.19	7154.06	
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QIATLHAQVTDMK	QIATLHAQVTDMK	2	QIATLHAQVTDMK2	437056	365657	306958
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QIATLHAQVTDMK	QIATLHAQVTDMK	3	QIATLHAQVTDMK3	6.59547e+06	7.83465e+06	7.43937e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QIATLHAQVTDMKK	QIATLHAQVTDMKK	2	QIATLHAQVTDMKK2	25952.2	36350.6	32962.5
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QIATLHAQVTDMKK	QIATLHAQVTDMKK	3	QIATLHAQVTDMKK3	966947	1.21065e+06	1.11939e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QIATLHAQVTDMKK	QIATLHAQVTDMKK	4	QIATLHAQVTDMKK4	1.98371e+06	2.59595e+06	2.73642e+06
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	QIAVEAQEILR	QIAVEAQEILR	2	QIAVEAQEILR2	16052.9	9880.57	17283.8
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	QIAWALR	QIAWALR	2	QIAWALR2	24020.1	22936.7	25513.9
O35806	O35806;D4A917	LTBP2_RAT	Ltbp2	Latent-transforming growth factor beta-binding protein 2	0	QICCCSR	QIC(UniMod:4)C(UniMod:4)C(UniMod:4)SR	2	QIC(UniMod:4)C(UniMod:4)C(UniMod:4)SR2			13560.4
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	QICCCSVGK	QIC(UniMod:4)C(UniMod:4)C(UniMod:4)SVGK	2	QIC(UniMod:4)C(UniMod:4)C(UniMod:4)SVGK2			109381
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	QICGKNKAHNIFPHITLCQFFMCEDSK	QIC(UniMod:4)GKNKAHNIFPHITLC(UniMod:4)QFFMC(UniMod:4)EDSK	4	QIC(UniMod:4)GKNKAHNIFPHITLC(UniMod:4)QFFMC(UniMod:4)EDSK4	5240.48	10420.6	
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	QICLPER	QIC(UniMod:4)LPER	2	QIC(UniMod:4)LPER2	1.6107e+06	1.32307e+06	1.34018e+06
P32198	P32198	CPT1A_RAT	Cpt1a	Carnitine O-palmitoyltransferase 1, liver isoform	1	QICLSGLHSWK	QIC(UniMod:4)LSGLHSWK	3	QIC(UniMod:4)LSGLHSWK3	9405.88	5832.04	13234
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	QICPFGSGIIVGPDDSAVDMDECKEPDVCK	QIC(UniMod:4)PFGSGIIVGPDDSAVDMDEC(UniMod:4)KEPDVC(UniMod:4)K	4	QIC(UniMod:4)PFGSGIIVGPDDSAVDMDEC(UniMod:4)KEPDVC(UniMod:4)K4	8582.82	6566.67	5956.58
Q9JK72	Q9JK72	CCS_RAT	Ccs	Copper chaperone for superoxide dismutase	1	QICSCDGLTIWEER	QIC(UniMod:4)SC(UniMod:4)DGLTIWEER	2	QIC(UniMod:4)SC(UniMod:4)DGLTIWEER2	16250.9	14157.7	12303.6
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	QICSQLSER	QIC(UniMod:4)SQLSER	2	QIC(UniMod:4)SQLSER2	53663.4	51354.4	58854.5
Q5HZV9	Q5HZV9	PP1R7_RAT	Ppp1r7	Protein phosphatase 1 regulatory subunit 7	1	QIDATFVR	QIDATFVR	2	QIDATFVR2	153549	159391	154855
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	QIDDSRK	QIDDSRK	2	QIDDSRK2			19492.7
P51635	P51635	AK1A1_RAT	Akr1a1	Aldo-keto reductase family 1 member A1	1	QIDDVLSVASVR	QIDDVLSVASVR	2	QIDDVLSVASVR2	5027.03	4554.46	3118.05
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	QIDGSLNR	QIDGSLNR	2	QIDGSLNR2	21455.1	34978.3	16010.4
Q811A3	Q811A3	PLOD2_RAT	Plod2	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2	1	QIDLENVWLHFIR	QIDLENVWLHFIR	3	QIDLENVWLHFIR3	2339.9		
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	QIDLLQEEITENQATIQK	QIDLLQEEITENQATIQK	3	QIDLLQEEITENQATIQK3	3957.1	11639.4	7508.37
P0C5H9	P0C5H9	MANF_RAT	Manf	Mesencephalic astrocyte-derived neurotrophic factor	1	QIDLSTVDLK	QIDLSTVDLK	2	QIDLSTVDLK2	16375.4	13359.1	11548
P0C5H9	P0C5H9	MANF_RAT	Manf	Mesencephalic astrocyte-derived neurotrophic factor	1	QIDLSTVDLKK	QIDLSTVDLKK	3	QIDLSTVDLKK3	23699.8	25830.3	20734.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	QIDNECMGDEDR	QIDNEC(UniMod:4)MGDEDR	2	QIDNEC(UniMod:4)MGDEDR2	648433	607514	633241
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	QIDNECMGDEDRTFLILR	QIDNEC(UniMod:4)MGDEDRTFLILR	3	QIDNEC(UniMod:4)MGDEDRTFLILR3	413138	461271	463616
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	QIDNPDYK	QIDNPDYK	2	QIDNPDYK2	2.97766e+06	3.00766e+06	3.08788e+06
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	QIDPDLGSQEDFK	QIDPDLGSQEDFK	2	QIDPDLGSQEDFK2	41458	38307.4	42517.4
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	QIDPDVVEAQR	QIDPDVVEAQR	2	QIDPDVVEAQR2	6360.86		2496.69
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	QIDSSPVGGETDEMTR	QIDSSPVGGETDEMTR	2	QIDSSPVGGETDEMTR2	6747.89	5768.79	10154.2
Q6F596	Q6F596	GGPPS_RAT	Ggps1	Geranylgeranyl pyrophosphate synthase	1	QIEACGGNPSLVALVK	QIEAC(UniMod:4)GGNPSLVALVK	2	QIEAC(UniMod:4)GGNPSLVALVK2	7305.36	3587.77	4060.02
D3ZW40	D3ZW40	D3ZW40_RAT	Mtmr4	protein-tyrosine-phosphatase	1	QIEAGYK	QIEAGYK	1	QIEAGYK1	2444.38	957.324	2811.77
Q5PQK5	Q5PQK5	Q5PQK5_RAT	Rdx	Radixin	1	QIEEQTMK	QIEEQTMK	2	QIEEQTMK2	2780.12	4178.65	3366.36
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	QIEETLAHFR	QIEETLAHFR	2	QIEETLAHFR2	26744	15926.5	15510.3
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	QIEETLAHFR	QIEETLAHFR	3	QIEETLAHFR3	261551	211250	253232
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	QIEGHTICALGDGAAWPVQGLIR	QIEGHTIC(UniMod:4)ALGDGAAWPVQGLIR	3	QIEGHTIC(UniMod:4)ALGDGAAWPVQGLIR3	83543.6	89515	68326.2
Q5RKH6	Q5RKH6	OS9_RAT	Os9	Protein OS-9	1	QIEGLVTEVLER	QIEGLVTEVLER	2	QIEGLVTEVLER2			4508.08
P68182	P68182;P27791	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	0	QIEHTLNEK	QIEHTLNEK	2	QIEHTLNEK2	32421.9	54391.6	41098.5
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QIEITICK	QIEITIC(UniMod:4)K	2	QIEITIC(UniMod:4)K2	32407.6	28301	31605
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	QIELACDSQEDVDSWK	QIELAC(UniMod:4)DSQEDVDSWK	2	QIELAC(UniMod:4)DSQEDVDSWK2	9546.2	8407.95	9605.26
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	QIELACDSQEDVDSWK	QIELAC(UniMod:4)DSQEDVDSWK	3	QIELAC(UniMod:4)DSQEDVDSWK3	9035.88	3466.88	4321.7
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	QIELDLNR	QIELDLNR	2	QIELDLNR2	18571.2	14951.7	14528.6
A0A8I6AVP7	A0A8I6AVP7	A0A8I6AVP7_RAT	Odr4	Protein odr-4 homolog	1	QIENGVYLINGQVK	QIENGVYLINGQVK	2	QIENGVYLINGQVK2	2521.91		1542.97
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	QIENVLR	QIENVLR	2	QIENVLR2	64512.3	82764.7	80319.4
F1LWZ3	F1LWZ3	F1LWZ3_RAT	Rhbdf2	Inactive rhomboid protein	1	QIEQLIR	QIEQLIR	2	QIEQLIR2	6020.33	9584.52	5931.37
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	QIESGHQQEVETLKK	QIESGHQQEVETLKK	4	QIESGHQQEVETLKK4	8270.95	4460.82	6971.03
Q6J2U6	Q6J2U6	RN114_RAT	Rnf114	E3 ubiquitin-protein ligase RNF114	1	QIESIETSCHGCR	QIESIETSC(UniMod:4)HGC(UniMod:4)R	3	QIESIETSC(UniMod:4)HGC(UniMod:4)R3	1980.37	2093.01	3203.1
A0A8I6A2A6	A0A8I6A2A6	A0A8I6A2A6_RAT	Spata5	Spermatogenesis associated 5	1	QIFAEATLR	QIFAEATLR	2	QIFAEATLR2			2922.32
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	QIFCQACLIEEPGSEHPCLISR	QIFC(UniMod:4)QAC(UniMod:4)LIEEPGSEHPC(UniMod:4)LISR	3	QIFC(UniMod:4)QAC(UniMod:4)LIEEPGSEHPC(UniMod:4)LISR3	19287	10947.9	14303.4
Q9QYW3	Q9QYW3	PHOCN_RAT	Mob4	MOB-like protein phocein	1	QIFDEYENETFLCHR	QIFDEYENETFLC(UniMod:4)HR	3	QIFDEYENETFLC(UniMod:4)HR3	57921.9	61373.7	73344.8
P60203	P60203	MYPR_RAT	Plp1	Myelin proteolipid protein	1	QIFGDYK	QIFGDYK	2	QIFGDYK2	62277.8	72408.8	56782.3
P24268	P24268	CATD_RAT	Ctsd	Cathepsin D	1	QIFGEATK	QIFGEATK	2	QIFGEATK2	61427.2	57932.5	65250.2
F1LN92	F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	1	QIFIGPPDIK	QIFIGPPDIK	2	QIFIGPPDIK2	10467.6	26460.5	5483.31
F1M8V2	F1M8V2	F1M8V2_RAT	Ube4b	Ubiquitin conjugation factor E4	1	QIFIPILQGLAR	QIFIPILQGLAR	2	QIFIPILQGLAR2	16470.2	16966.9	16686.9
Q09073	A0A8I6A075;A0A8I6G2T3;A0A8I6A2W7;A0A8I6GK78;Q09073	ADT2_RAT	Slc25a5	ADP/ATP translocase 2	0	QIFLGGVDK	QIFLGGVDK	1	QIFLGGVDK1	2525.89	3547.94	6705.78
Q09073	A0A8I6A075;A0A8I6G2T3;A0A8I6A2W7;A0A8I6GK78;Q09073	ADT2_RAT	Slc25a5	ADP/ATP translocase 2	0	QIFLGGVDK	QIFLGGVDK	2	QIFLGGVDK2	1.08721e+06	1.18619e+06	1.19717e+06
Q09073	A0A8I6A075;A0A8I6G2T3;A0A8I6A2W7;A0A8I6GK78;Q09073	ADT2_RAT	Slc25a5	ADP/ATP translocase 2	0	QIFLGGVDKR	QIFLGGVDKR	2	QIFLGGVDKR2	172311	145947	143240
Q05962	Q05962	ADT1_RAT	Slc25a4	ADP/ATP translocase 1	1	QIFLGGVDR	QIFLGGVDR	2	QIFLGGVDR2	610120	645737	599760
P05426	P05426;F1LUE9	RL7_RAT	Rpl7	Large ribosomal subunit protein uL30	0	QIFNGTFVK	QIFNGTFVK	2	QIFNGTFVK2	29490	25527.9	20140.1
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	QIFQEAEDMVAQK	QIFQEAEDMVAQK	2	QIFQEAEDMVAQK2	28619.2	25962.3	37918.3
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	QIFQEAEDMVAQK	QIFQEAEDMVAQK	3	QIFQEAEDMVAQK3	7071.21	4763.09	8029.44
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	QIFQEDKDLVPEFVHSEGLSCLIR	QIFQEDKDLVPEFVHSEGLSC(UniMod:4)LIR	3	QIFQEDKDLVPEFVHSEGLSC(UniMod:4)LIR3	31205.5	35990.2	29171.8
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	QIFQEDKDLVPEFVHSEGLSCLIR	QIFQEDKDLVPEFVHSEGLSC(UniMod:4)LIR	4	QIFQEDKDLVPEFVHSEGLSC(UniMod:4)LIR4	66952.8	74810.7	58798.7
Q9ESH6	Q9ESH6	GLRX1_RAT	Glrx	Glutaredoxin-1	1	QIGALQL	QIGALQL	1	QIGALQL1	9184.46	7826.51	8017.17
P47942	P47942;Q62950	DPYL2_RAT	Dpysl2	Dihydropyrimidinase-related protein 2	0	QIGENLIVPGGVK	QIGENLIVPGGVK	2	QIGENLIVPGGVK2	16326.3	13270.4	13487.5
Q5PQS0	Q5PQS0	PKHM1_RAT	Plekhm1	Pleckstrin homology domain-containing family M member 1	1	QIGFSFVRPK	QIGFSFVRPK	3	QIGFSFVRPK3	1012.21	574.213	996.792
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	QIGIDPPR	QIGIDPPR	2	QIGIDPPR2	90362.8	100507	127316
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	QIGLDQIWDDLR	QIGLDQIWDDLR	2	QIGLDQIWDDLR2	26982.5	26761.3	26626.5
Q6AYT3	Q6AYT3	RTCB_RAT	Rtcb	RNA-splicing ligase RtcB homolog	1	QIGNVAALPGIVHR	QIGNVAALPGIVHR	2	QIGNVAALPGIVHR2		3648.38	
Q6AYT3	Q6AYT3	RTCB_RAT	Rtcb	RNA-splicing ligase RtcB homolog	1	QIGNVAALPGIVHR	QIGNVAALPGIVHR	3	QIGNVAALPGIVHR3	2961.41	5606.6	7373.75
Q99PW3	Q99PW3	NEUR1_RAT	Neu1	Sialidase-1	1	QIGSVDTFR	QIGSVDTFR	2	QIGSVDTFR2	8923.05	5218.31	8458.43
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	QIGTLLAELR	QIGTLLAELR	2	QIGTLLAELR2	20432.7	20808	14674.2
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	QIGVEHVVVYVNK	QIGVEHVVVYVNK	2	QIGVEHVVVYVNK2	825.6	1375.39	1134.05
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	QIGVEHVVVYVNK	QIGVEHVVVYVNK	3	QIGVEHVVVYVNK3	54424.7	47140	47098.6
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	QIGWFPANYVK	QIGWFPANYVK	2	QIGWFPANYVK2	14746.7	13935.7	10902.1
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	QIGYDVLAEDTITALLHNNR	QIGYDVLAEDTITALLHNNR	3	QIGYDVLAEDTITALLHNNR3		5269.2	
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	QIGYDVLAEDTITALLHNNRK	QIGYDVLAEDTITALLHNNRK	3	QIGYDVLAEDTITALLHNNRK3	4661.39	4017.68	11600.4
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	QIGYDVLAEDTITALLHNNRK	QIGYDVLAEDTITALLHNNRK	4	QIGYDVLAEDTITALLHNNRK4	27190.3	27247.4	33222.2
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	QIGYVYR	QIGYVYR	2	QIGYVYR2	4.81199e+06	4.47887e+06	4.84447e+06
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	QIHEHEQENELR	QIHEHEQENELR	2	QIHEHEQENELR2	12399.4		
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	QIHEHEQENELR	QIHEHEQENELR	3	QIHEHEQENELR3	5214.92		11136.6
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	QIHEHEQENELREQMSGYK	QIHEHEQENELREQMSGYK	4	QIHEHEQENELREQMSGYK4	17221.8	16130.7	8257.81
Q99MI7	Q99MI7	UBA3_RAT	Uba3	NEDD8-activating enzyme E1 catalytic subunit	1	QIHVIDMDTIDVSNLNR	QIHVIDMDTIDVSNLNR	3	QIHVIDMDTIDVSNLNR3	10529.2	6258.27	5503.81
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	QIIAHSSK	QIIAHSSK	2	QIIAHSSK2			9329.86
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	QIICAAQEHVK	QIIC(UniMod:4)AAQEHVK	2	QIIC(UniMod:4)AAQEHVK2	5629.32	7161.75	2614.05
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	QIICAAQEHVK	QIIC(UniMod:4)AAQEHVK	3	QIIC(UniMod:4)AAQEHVK3	38630.3	56237.6	49987.2
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	QIIEDNPLGSLCR	QIIEDNPLGSLC(UniMod:4)R	2	QIIEDNPLGSLC(UniMod:4)R2	22540	22869	21727.4
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	QIIEEQSGPYIWVPAK	QIIEEQSGPYIWVPAK	2	QIIEEQSGPYIWVPAK2	15778.7	14021.4	22003.7
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	QIIEEQSGPYIWVPAK	QIIEEQSGPYIWVPAK	3	QIIEEQSGPYIWVPAK3	3896.05		3818.93
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	QIIEQLSSGFFSPK	QIIEQLSSGFFSPK	2	QIIEQLSSGFFSPK2	16188.9	9525.01	14995.7
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	QIIFPEALR	QIIFPEALR	2	QIIFPEALR2	7281.62	7225.33	10801.4
P51111	P51111	HD_RAT	Htt	Huntingtin	1	QIIGIPK	QIIGIPK	2	QIIGIPK2	19203.3	24018.9	27245.1
P00770	P00770	MCPT2_RAT	Mcpt2	Mast cell protease 2	1	QIIHESYNSVPNLHDIMLLK	QIIHESYNSVPNLHDIMLLK	4	QIIHESYNSVPNLHDIMLLK4		6380.34	
Q5PQN6	Q5PQN6	SPE39_RAT	Vipas39	Spermatogenesis-defective protein 39 homolog	1	QIIIEANDR	QIIIEANDR	2	QIIIEANDR2	3795.22	5100.28	5262.2
Q4KMA2	Q4KMA2	RD23B_RAT	Rad23b	UV excision repair protein RAD23 homolog B	1	QIIQQNPSLLPALLQQIGR	QIIQQNPSLLPALLQQIGR	3	QIIQQNPSLLPALLQQIGR3	36565.8	30782.7	37523.8
Q4V794	Q4V794	Q4V794_RAT	Vps37a	VPS37A subunit of ESCRT-I	1	QIITDKEDLVK	QIITDKEDLVK	3	QIITDKEDLVK3	2037.76	2391.11	1989.26
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	QIKEETEEWRR	QIKEETEEWRR	3	QIKEETEEWRR3	11579.5	17561	7303.49
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	QIKPLLSASSR	QIKPLLSASSR	3	QIKPLLSASSR3	24451.3	20945.6	32260.1
P40112	P40112	PSB3_RAT	Psmb3	Proteasome subunit beta type-3	1	QIKPYTLMSMVANLLYEK	QIKPYTLMSMVANLLYEK	3	QIKPYTLMSMVANLLYEK3	18791.9	5326.96	
P40112	P40112	PSB3_RAT	Psmb3	Proteasome subunit beta type-3	1	QIKPYTLMSMVANLLYEKR	QIKPYTLMSMVANLLYEKR	3	QIKPYTLMSMVANLLYEKR3		5118.55	5774.73
P40112	P40112	PSB3_RAT	Psmb3	Proteasome subunit beta type-3	1	QIKPYTLMSMVANLLYEKR	QIKPYTLMSMVANLLYEKR	4	QIKPYTLMSMVANLLYEKR4	11692.3	11865.1	12678.9
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	QILAPVVK	QILAPVVK	2	QILAPVVK2	61200.5		54619.6
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	QILDEAGK	QILDEAGK	1	QILDEAGK1	10993.3	10714.7	9156.38
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	QILDEAGK	QILDEAGK	2	QILDEAGK2	543760	545251	576598
O35462	O35462	ANGP2_RAT	Angpt2	Angiopoietin-2	1	QILDQTSEINK	QILDQTSEINK	2	QILDQTSEINK2	7098.53	6042.35	10708.6
P05369	P05369	FPPS_RAT	Fdps	Farnesyl pyrophosphate synthase	1	QILEENYGQK	QILEENYGQK	2	QILEENYGQK2	7073.75	4388.1	4588.94
P05369	P05369	FPPS_RAT	Fdps	Farnesyl pyrophosphate synthase	1	QILEENYGQKDPEK	QILEENYGQKDPEK	2	QILEENYGQKDPEK2	3379.68	4662.09	3795.41
P05369	P05369	FPPS_RAT	Fdps	Farnesyl pyrophosphate synthase	1	QILEENYGQKDPEK	QILEENYGQKDPEK	3	QILEENYGQKDPEK3	29163.1	28353.1	38778.4
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	QILEGLEFNLTQIPEADIHK	QILEGLEFNLTQIPEADIHK	3	QILEGLEFNLTQIPEADIHK3	12624.7		7466.51
A0A8I6AEL0	A0A8I6AEL0;F1LUY7	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	0	QILEGLK	QILEGLK	2	QILEGLK2	17887.1	23127.6	15256.1
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	QILEIVHEPAHQDILR	QILEIVHEPAHQDILR	4	QILEIVHEPAHQDILR4	2396.63		
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	QILENELQIPVPK	QILENELQIPVPK	2	QILENELQIPVPK2	36951.3	42867.8	37704
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	QILENELQIPVPK	QILENELQIPVPK	3	QILENELQIPVPK3	2352.14	1992.12	2801.21
Q6PEC1	Q6PEC1	TBCA_RAT	Tbca	Tubulin-specific chaperone A	1	QILESEK	QILESEK	2	QILESEK2	51109.6	34887	38314.5
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	QILESMQSDR	QILESMQSDR	2	QILESMQSDR2	41074.2	39740.9	54832.2
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	QILFQHR	QILFQHR	2	QILFQHR2	9232.74	9068.51	6257.16
A0A0G2JVL5	A0A0G2JVL5	A0A0G2JVL5_RAT	Rimoc1	Similar to expressed sequence AW549877	1	QILGFFQQR	QILGFFQQR	2	QILGFFQQR2	16561.1	9469.12	14108.1
B2RZD6	B2RZD6	B2RZD6_RAT	Ndufa4	NDUFA4, mitochondrial complex associated	1	QILGQAK	QILGQAK	1	QILGQAK1	6485.58	8024.08	7557.19
Q5M9G3	Q5M9G3	CAPR1_RAT	Caprin1	Caprin-1	1	QILGVIDK	QILGVIDK	2	QILGVIDK2	78434.4	58915.3	65102.9
Q5M9G3	Q5M9G3	CAPR1_RAT	Caprin1	Caprin-1	1	QILGVIDKK	QILGVIDKK	2	QILGVIDKK2	4691.44	4486.02	5655.13
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	QILHLGLPWGNVAVER	QILHLGLPWGNVAVER	3	QILHLGLPWGNVAVER3	7015.54	13996.8	12856.3
Q99P99	Q99P99	HDAC4_RAT	Hdac4	Histone deacetylase 4	1	QILIAEFQR	QILIAEFQR	2	QILIAEFQR2	7782.02	6201.13	7028.42
Q75Q41	Q75Q41	TOM22_RAT	Tomm22	Mitochondrial import receptor subunit TOM22 homolog	1	QILLGPNTGLSGGMPGALPPLPGKI	QILLGPNTGLSGGMPGALPPLPGKI	3	QILLGPNTGLSGGMPGALPPLPGKI3	8486.28	19160.8	18978.4
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	QILLPFR	QILLPFR	2	QILLPFR2	175845	177675	184900
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	QILLSTEEDSGAGPPR	QILLSTEEDSGAGPPR	2	QILLSTEEDSGAGPPR2	15628.7	11843.3	6981.2
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	QILLSTEEDSGAGPPR	QILLSTEEDSGAGPPR	3	QILLSTEEDSGAGPPR3	10748.5	5867.31	7582.94
D3ZZB2	D3ZZB2	D3ZZB2_RAT	Pex1	Peroxisomal ATPase PEX1	1	QILMDTIQLPAK	QILMDTIQLPAK	2	QILMDTIQLPAK2	3283.74	3569.86	4169.87
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	QILNQIDK	QILNQIDK	1	QILNQIDK1	169384	185417	137594
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	QILNQIDK	QILNQIDK	2	QILNQIDK2	9.24789e+06	9.72884e+06	9.60928e+06
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	QILNQIDKVK	QILNQIDKVK	2	QILNQIDKVK2	81721.7	77213	86940.3
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	QILNQIDKVK	QILNQIDKVK	3	QILNQIDKVK3	682283	816667	919654
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	QILNYVNQAVR	QILNYVNQAVR	2	QILNYVNQAVR2	98468.3	116925	92379.8
Q4KLI9	Q4KLI9	FBXW5_RAT	Fbxw5	F-box/WD repeat-containing protein 5	1	QILPHQMTTAGPVLGEGR	QILPHQMTTAGPVLGEGR	3	QILPHQMTTAGPVLGEGR3	4999.32	6577.89	4025.46
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	QILQGLSYLHENR	QILQGLSYLHENR	3	QILQGLSYLHENR3	15949.8	10995.6	9281.17
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	QILQLQASHK	QILQLQASHK	2	QILQLQASHK2	10807.1	5927.16	8816.11
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	QILQLQASHK	QILQLQASHK	3	QILQLQASHK3	65253.9	41570.8	75714.1
Q5XIG8	Q5XIG8	STRAP_RAT	Strap	Serine-threonine kinase receptor-associated protein	1	QILSADDK	QILSADDK	2	QILSADDK2	68822.8	79685.6	69762.8
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	QILSADLR	QILSADLR	2	QILSADLR2	18464.6		12805.4
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	QILSDQLK	QILSDQLK	2	QILSDQLK2	23953.3	23750.4	17458.8
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	QILSLNYDDSTAAGR	QILSLNYDDSTAAGR	2	QILSLNYDDSTAAGR2	6209.12	5276.94	7545.74
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	QILSLNYDDSTAAGRK	QILSLNYDDSTAAGRK	3	QILSLNYDDSTAAGRK3	6798.71	20392.4	9630.78
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	QILSNPK	QILSNPK	2	QILSNPK2	33439.1	46272.1	37439.6
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	QILSQSTDSLNMR	QILSQSTDSLNMR	2	QILSQSTDSLNMR2	87998	94614.4	79300.9
E9PU15	E9PU15	E9PU15_RAT	Dicer1	Endoribonuclease Dicer	1	QILVPELCAIHPIPASLWR	QILVPELC(UniMod:4)AIHPIPASLWR	3	QILVPELC(UniMod:4)AIHPIPASLWR3	18225.8	8594.13	
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	QIMLLEQSYQK	QIMLLEQSYQK	2	QIMLLEQSYQK2	20223.1	19905.2	19248.2
A0A8I6A9E8	A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	1	QIMQGAHSDFIVR	QIMQGAHSDFIVR	3	QIMQGAHSDFIVR3	8146.39	10880.5	14894.9
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	QINDIQLSR	QINDIQLSR	2	QINDIQLSR2	113224	128987	121565
A0A8I6AD03	A0A8I6AD03	A0A8I6AD03_RAT	Aplp1	Amyloid beta precursor like protein 1	1	QINEVMR	QINEVMR	2	QINEVMR2	23115.2	38744.3	40665.8
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	QINLEGSVK	QINLEGSVK	2	QINLEGSVK2	121307	115449	159687
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	QINLSNIR	QINLSNIR	2	QINLSNIR2	198694	147849	151476
A0A8I5ZMG6	A0A8I5ZMG6	A0A8I5ZMG6_RAT	Ppp2r5e	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	QINNIFLR	QINNIFLR	2	QINNIFLR2	2876.72		6254.63
D4A1A5	D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	QINNIFYR	QINNIFYR	2	QINNIFYR2	11372.3	9252.28	3193.53
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	QINNVSAMLVLAR	QINNVSAMLVLAR	2	QINNVSAMLVLAR2	158973	141246	144320
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	QINNVSAMLVLAR	QINNVSAMLVLAR	3	QINNVSAMLVLAR3	20176.2	18923	23543.2
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	QINNVSAMLVLARPVTGPR	QINNVSAMLVLARPVTGPR	3	QINNVSAMLVLARPVTGPR3	24688.5	16281.5	9508.79
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	QINSLESR	QINSLESR	2	QINSLESR2	42011.2	29989.3	26814.1
M0R915	M0R915;A0A8I6GLQ4	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	0	QINSPLK	QINSPLK	2	QINSPLK2	35551.3	33050.7	44998.5
P83732	A0A8I6AEE5;P83732	RL24_RAT	Rpl24	Large ribosomal subunit protein eL24	0	QINWTVLYR	QINWTVLYR	2	QINWTVLYR2	25031.2	17995.8	19429.3
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	QIPAGIVVDGGSDWFVLTR	QIPAGIVVDGGSDWFVLTR	3	QIPAGIVVDGGSDWFVLTR3	37548.9	56847.2	83706.8
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	QIPAITCIQSQWR	QIPAITC(UniMod:4)IQSQWR	2	QIPAITC(UniMod:4)IQSQWR2	53670.4	57459.1	51091.1
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	QIPAITCIQSQWR	QIPAITC(UniMod:4)IQSQWR	3	QIPAITC(UniMod:4)IQSQWR3	3512.02	4315.33	3062.71
P55213	P55213	CASP3_RAT	Casp3	Caspase-3	1	QIPCIVSMLTK	QIPC(UniMod:4)IVSMLTK	2	QIPC(UniMod:4)IVSMLTK2	44040.2	48611.8	44755.3
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	QIPEALGYVR	QIPEALGYVR	2	QIPEALGYVR2	52019	41195.5	52901
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	QIPGLIQNMTVR	QIPGLIQNMTVR	2	QIPGLIQNMTVR2	546203	427739	378227
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	QIPLQDVAFPDFR	QIPLQDVAFPDFR	2	QIPLQDVAFPDFR2	14786.2	17780.8	12303.7
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	QIPPESPILVHCSAGVGR	QIPPESPILVHC(UniMod:4)SAGVGR	3	QIPPESPILVHC(UniMod:4)SAGVGR3	76294.3	73533.8	55972
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	QIPVHPVPDPLVHEVLNLAFK	QIPVHPVPDPLVHEVLNLAFK	3	QIPVHPVPDPLVHEVLNLAFK3	2524.34	2658.13	
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	QIPVHPVPDPLVHEVLNLAFK	QIPVHPVPDPLVHEVLNLAFK	4	QIPVHPVPDPLVHEVLNLAFK4	5094.08		8861.43
G3V7A2	G3V7A2	G3V7A2_RAT	Tmem88	Transmembrane protein 88	1	QIPVSSSPR	QIPVSSSPR	2	QIPVSSSPR2	50949.5	61606.1	60088.3
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	QIPVVGSVLNWFSPVQASQK	QIPVVGSVLNWFSPVQASQK	3	QIPVVGSVLNWFSPVQASQK3	6103.67	5641.27	17224
P16036	P16036	S25A3_RAT	Slc25a3	Solute carrier family 25 member 3	1	QIPYTMMK	QIPYTMMK	2	QIPYTMMK2	276605	318278	332795
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	QIQALEHAYDDLCR	QIQALEHAYDDLC(UniMod:4)R	3	QIQALEHAYDDLC(UniMod:4)R3	13208.3	14841	12781.2
P19511	P19511	AT5F1_RAT	Atp5pb	ATP synthase F(0) complex subunit B1, mitochondrial	1	QIQDAINR	QIQDAINR	2	QIQDAINR2	482338	449218	487699
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	QIQDLEK	QIQDLEK	2	QIQDLEK2	18297.7	22260.3	16602.8
Q811U3	Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	1	QIQDMAEEK	QIQDMAEEK	2	QIQDMAEEK2	2236.19	3711.96	
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	QIQEDWELAER	QIQEDWELAER	2	QIQEDWELAER2	14674	14564.5	19641
Q9JLS3	Q9JLS3	TAOK2_RAT	Taok2	Serine/threonine-protein kinase TAO2	1	QIQEHEQDSALR	QIQEHEQDSALR	3	QIQEHEQDSALR3	2671.95	3974.16	3800.85
Q6XUX2	Q6XUX2	DUSTY_RAT	Dstyk	Dual serine/threonine and tyrosine protein kinase	1	QIQELIISR	QIQELIISR	2	QIQELIISR2	2085.98	2506.99	4159.61
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	QIQELVEAIVLPMNHK	QIQELVEAIVLPMNHK	2	QIQELVEAIVLPMNHK2	9796.5	5517.45	7435.13
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	QIQELVEAIVLPMNHK	QIQELVEAIVLPMNHK	3	QIQELVEAIVLPMNHK3	270230	162491	194045
D3ZCT7	D3ZCT7	D3ZCT7_RAT	Sec23b	Protein transport protein SEC23	1	QIQEMLGLTK	QIQEMLGLTK	2	QIQEMLGLTK2	6843.74	5739.82	8352.9
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	QIQESENIR	QIQESENIR	2	QIQESENIR2	272380	309314	264447
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	QIQESENIRVENSESGSK	QIQESENIRVENSESGSK	3	QIQESENIRVENSESGSK3	49480	51296.6	45132.3
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	QIQEVIR	QIQEVIR	2	QIQEVIR2	734949	717430	806493
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	QIQLAQK	QIQLAQK	2	QIQLAQK2	20780.7	23276.2	32657.9
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	QIQQLESNNR	QIQQLESNNR	2	QIQQLESNNR2	89838.6	83622.5	74306.9
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	QIQQYMK	QIQQYMK	1	QIQQYMK1	3683.8	4047.96	1638.09
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	QIQQYMK	QIQQYMK	2	QIQQYMK2	205546	277275	243265
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	QIQSAATVFR	QIQSAATVFR	2	QIQSAATVFR2	4188.66	8034.23	8541.21
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	QIQSLCFQVNNLLEK	QIQSLC(UniMod:4)FQVNNLLEK	2	QIQSLC(UniMod:4)FQVNNLLEK2	24260.4	19696.7	16712.5
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	QIQSLCFQVNNLLEK	QIQSLC(UniMod:4)FQVNNLLEK	3	QIQSLC(UniMod:4)FQVNNLLEK3	17714.6	17259.5	20544
P09456	P09456	KAP0_RAT	Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit	1	QIQSLQK	QIQSLQK	2	QIQSLQK2	62300.4	85814.3	90446.3
Q4G069	Q4G069	RMD1_RAT	Rmdn1	Regulator of microtubule dynamics protein 1	1	QIQTEAAQLLTGL	QIQTEAAQLLTGL	2	QIQTEAAQLLTGL2	9530.71	9851.71	4242.47
Q63621	Q63621	IL1AP_RAT	Il1rap	Interleukin-1 receptor accessory protein	1	QIQVFEDEPAR	QIQVFEDEPAR	2	QIQVFEDEPAR2	45129.5	35839.8	40788.7
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	QIQVLMDK	QIQVLMDK	1	QIQVLMDK1	4926.1	4930.04	5850.03
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	QIQVLMDK	QIQVLMDK	2	QIQVLMDK2	390994	467375	398564
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	QIQVSRPWALAVR	QIQVSRPWALAVR	3	QIQVSRPWALAVR3	46688.1	35632.6	26945.9
B4F767	B4F767	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	1	QIQWFWQVVK	QIQWFWQVVK	2	QIQWFWQVVK2	16697.6	8309.78	18984.7
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	QIRDFLTEDSADLDSIEAVANEVLK	QIRDFLTEDSADLDSIEAVANEVLK	3	QIRDFLTEDSADLDSIEAVANEVLK3	4873.77	7304.3	2602.5
Q5XIJ7	Q5XIJ7	Q5XIJ7_RAT	Cab39l	Calcium binding protein 39-like	1	QIRDLKK	QIRDLKK	2	QIRDLKK2			84180.1
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	QIRPHWMFVLDSLLSR	QIRPHWMFVLDSLLSR	3	QIRPHWMFVLDSLLSR3		6083.45	3322.26
Q9Z1C7	Q9Z1C7	RPGF4_RAT	Rapgef4	Rap guanine nucleotide exchange factor 4 (Fragment)	1	QISEDAK	QISEDAK	2	QISEDAK2			72035.9
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	QISEDVDGPDNHESPENWEIVR	QISEDVDGPDNHESPENWEIVR	3	QISEDVDGPDNHESPENWEIVR3	32735.7	28676.8	25027.3
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	QISEGVEYIHK	QISEGVEYIHK	2	QISEGVEYIHK2	38281.8	41950.3	31422.3
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	QISEGVEYIHK	QISEGVEYIHK	3	QISEGVEYIHK3	214225	223010	204125
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	QISGQYSGSPQLLK	QISGQYSGSPQLLK	2	QISGQYSGSPQLLK2	16881.9	14616.8	14190
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	QISILESVNTNK	QISILESVNTNK	2	QISILESVNTNK2	27691.5	29356.5	24517
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	QISILESVNTNKK	QISILESVNTNKK	3	QISILESVNTNKK3	5250.37		3895.51
P46844	P46844	BIEA_RAT	Blvra	Biliverdin reductase A	1	QISLEDALR	QISLEDALR	2	QISLEDALR2	8786.49	5363.66	
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	QISLYAEYDRPNLLPFLR	QISLYAEYDRPNLLPFLR	3	QISLYAEYDRPNLLPFLR3	13725.9	7979.13	4979.61
P63036	P63036	DNJA1_RAT	Dnaja1	DnaJ homolog subfamily A member 1	1	QISQAYEVLADSK	QISQAYEVLADSK	2	QISQAYEVLADSK2	15986.1	10413.4	16846.9
P63036	P63036	DNJA1_RAT	Dnaja1	DnaJ homolog subfamily A member 1	1	QISQAYEVLADSKK	QISQAYEVLADSKK	3	QISQAYEVLADSKK3	564240	541690	561021
B1WC06	B1WC06	B1WC06_RAT	Mon1a	Vacuolar fusion protein MON1 homolog	1	QISQDFSELSTQLTGVAR	QISQDFSELSTQLTGVAR	3	QISQDFSELSTQLTGVAR3	3763.05	3984.43	3564.94
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	QISQDVK	QISQDVK	2	QISQDVK2	58680.8	70236.2	
Q68FT3	Q68FT3	PYRD2_RAT	Pyroxd2	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2	1	QISQFSR	QISQFSR	2	QISQFSR2	23105.6	14920.9	24557.8
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	QISSFMSEISDEFK	QISSFMSEISDEFK	2	QISSFMSEISDEFK2	9296.67	6361.97	9840.69
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	QISSFVSEISDEFK	QISSFVSEISDEFK	2	QISSFVSEISDEFK2	32724.8	40090.7	22570.3
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	QISSFVSEISDEFK	QISSFVSEISDEFK	3	QISSFVSEISDEFK3	2459.69	7247.4	2022.32
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	QISSLRDEVEAK	QISSLRDEVEAK	2	QISSLRDEVEAK2	4463.45	10663.6	7321.49
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	QISSLRDEVEAK	QISSLRDEVEAK	3	QISSLRDEVEAK3	303011	298536	270352
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	QISYSPGICSIEHQQEITK	QISYSPGIC(UniMod:4)SIEHQQEITK	3	QISYSPGIC(UniMod:4)SIEHQQEITK3	39785.7	43253	44821.2
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	QITAQQINK	QITAQQINK	2	QITAQQINK2	17124.2	15037.8	13018.2
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	QITASSFK	QITASSFK	1	QITASSFK1	92331.8	93649.1	72320.6
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	QITASSFK	QITASSFK	2	QITASSFK2	6.10603e+06	6.8423e+06	7.16985e+06
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	QITASSFKK	QITASSFKK	2	QITASSFKK2	120437	163759	156785
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	QITDQAENPSSAASKPPK	QITDQAENPSSAASKPPK	3	QITDQAENPSSAASKPPK3	35556.6	23687.9	12629.2
A0A8I5ZVU1	A0A8I5ZVU1	A0A8I5ZVU1_RAT	Uckl1	Uridine-cytidine kinase	1	QITGVSILR	QITGVSILR	2	QITGVSILR2	11909	5124.98	
Q63716	Q63716;A0A0G2K3Z9	PRDX1_RAT	Prdx1	Peroxiredoxin-1	0	QITINDLPVGR	QITINDLPVGR	2	QITINDLPVGR2	126732		
Q63716	Q63716;A0A0G2K3Z9	PRDX1_RAT	Prdx1	Peroxiredoxin-1	0	QITINDLPVGR	QITINDLPVGR	3	QITINDLPVGR3	8946.16	8593.23	11084
A0A8I6A8Q1	A0A8I6A8Q1	A0A8I6A8Q1_RAT	A2ml1	Alpha-2-macroglobulin-like 1	1	QITLELPNDVVEGSAR	QITLELPNDVVEGSAR	2	QITLELPNDVVEGSAR2	18923.9	12654.5	11905.1
A0A8I6A8Q1	A0A8I6A8Q1	A0A8I6A8Q1_RAT	A2ml1	Alpha-2-macroglobulin-like 1	1	QITLELPNDVVEGSAR	QITLELPNDVVEGSAR	3	QITLELPNDVVEGSAR3	1970.59		
Q9Z0V5	Q9Z0V5	PRDX4_RAT	Prdx4	Peroxiredoxin-4	1	QITLNDLPVGR	QITLNDLPVGR	2	QITLNDLPVGR2		233786	247652
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	QITNFQLSIENLDQSLANYGRPK	QITNFQLSIENLDQSLANYGRPK	3	QITNFQLSIENLDQSLANYGRPK3	10944.2	20286.8	
Q9Z2Q7	Q9Z2Q7	STX8_RAT	Stx8	Syntaxin-8	1	QITQLEGDRR	QITQLEGDRR	3	QITQLEGDRR3	48594.1	54579.9	56246.3
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	QITQNTDYR	QITQNTDYR	2	QITQNTDYR2	6818.74	9310.67	5352.63
P62716	A0A0G2JYA4;P63331;P62716;Q5BJ92	PP2AB_RAT	Ppp2cb	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	0	QITQVYGFYDECLR	QITQVYGFYDEC(UniMod:4)LR	2	QITQVYGFYDEC(UniMod:4)LR2	53735.4	53506.5	39557.8
P62716	A0A0G2JYA4;P63331;P62716;Q5BJ92	PP2AB_RAT	Ppp2cb	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	0	QITQVYGFYDECLR	QITQVYGFYDEC(UniMod:4)LR	3	QITQVYGFYDEC(UniMod:4)LR3	19504.1	15449	12960
P62716	A0A0G2JYA4;P63331;P62716;Q5BJ92	PP2AB_RAT	Ppp2cb	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	0	QITQVYGFYDECLRK	QITQVYGFYDEC(UniMod:4)LRK	3	QITQVYGFYDEC(UniMod:4)LRK3	51067.3	69748.3	47547.7
Q64620	Q64620	PPP6_RAT	Ppp6c	Serine/threonine-protein phosphatase 6 catalytic subunit	1	QITQVYGFYDECQTK	QITQVYGFYDEC(UniMod:4)QTK	2	QITQVYGFYDEC(UniMod:4)QTK2	45050	36887.1	44868.4
Q64620	Q64620	PPP6_RAT	Ppp6c	Serine/threonine-protein phosphatase 6 catalytic subunit	1	QITQVYGFYDECQTK	QITQVYGFYDEC(UniMod:4)QTK	3	QITQVYGFYDEC(UniMod:4)QTK3	29592.3	23746.4	22994.6
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	QITSADTVR	QITSADTVR	2	QITSADTVR2	80197.2	61156.3	62385.6
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	QITSYGETCPGLEQYAIK	QITSYGETC(UniMod:4)PGLEQYAIK	3	QITSYGETC(UniMod:4)PGLEQYAIK3	109341	89235.1	100277
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	QITSYGETCPGLEQYAIKK	QITSYGETC(UniMod:4)PGLEQYAIKK	3	QITSYGETC(UniMod:4)PGLEQYAIKK3	41239.4	60656.8	44565.7
P35704	P35704	PRDX2_RAT	Prdx2	Peroxiredoxin-2	1	QITVNDLPVGR	QITVNDLPVGR	2	QITVNDLPVGR2	78419.3	79097.9	93921.2
P09650	P09650	MCPT1_RAT	Mcpt1	Mast cell protease 1	1	QIVHPNYNFYSNLHDIMLLK	QIVHPNYNFYSNLHDIMLLK	4	QIVHPNYNFYSNLHDIMLLK4	11217.6	8678.33	15867.8
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	QIVLTGILEQVVNCR	QIVLTGILEQVVNC(UniMod:4)R	2	QIVLTGILEQVVNC(UniMod:4)R2	5843.37	5885.46	4203.29
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	QIVLTGILEQVVNCR	QIVLTGILEQVVNC(UniMod:4)R	3	QIVLTGILEQVVNC(UniMod:4)R3	11244.1	11470.4	9722.28
E9PT90	E9PT90	E9PT90_RAT	Spart	Spartin	1	QIVPCEPSSEEK	QIVPC(UniMod:4)EPSSEEK	2	QIVPC(UniMod:4)EPSSEEK2	34501.5	32763.4	37875.9
A0A0G2K528	A0A0G2K528	A0A0G2K528_RAT	Stx16	Syntaxin 16	1	QIVQSISDLNEIFR	QIVQSISDLNEIFR	2	QIVQSISDLNEIFR2	17616.2	7963.29	13215.6
A0A0G2K528	A0A0G2K528	A0A0G2K528_RAT	Stx16	Syntaxin 16	1	QIVQSISDLNEIFR	QIVQSISDLNEIFR	3	QIVQSISDLNEIFR3		40181.1	
O08679	Q8VHF0;O08678;O08679	MARK2_RAT	Mark2	Serine/threonine-protein kinase MARK2	0	QIVSAVQYCHQK	QIVSAVQYC(UniMod:4)HQK	3	QIVSAVQYC(UniMod:4)HQK3	16815.9	7436.04	
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	QIVSEMLR	QIVSEMLR	2	QIVSEMLR2	32687	27887.1	30074.2
Q5BJT7	Q5BJT7	CCD93_RAT	Ccdc93	Coiled-coil domain-containing protein 93	1	QIVSEYEGK	QIVSEYEGK	2	QIVSEYEGK2	10558.6	17371.7	15453.6
M0RD40	M0RD40	M0RD40_RAT	Sik3	non-specific serine/threonine protein kinase	1	QIVTAVYFCHCR	QIVTAVYFC(UniMod:4)HC(UniMod:4)R	3	QIVTAVYFC(UniMod:4)HC(UniMod:4)R3	9225.6		
P23377	P23377	FURIN_RAT	Furin	Furin	1	QIVTTDLR	QIVTTDLR	2	QIVTTDLR2	8601.91	3900.73	4275
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	QIVVNDYYR	QIVVNDYYR	2	QIVVNDYYR2	158972	162537	155668
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	QIVWFWQFVK	QIVWFWQFVK	2	QIVWFWQFVK2	3709.77	4466.29	7916.51
P16617	P16617;M0R6Y8	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	0	QIVWNGPVGVFEWEAFAR	QIVWNGPVGVFEWEAFAR	3	QIVWNGPVGVFEWEAFAR3		2914.29	7670.8
Q4KLH5	A0A8I6AVV4;Q4KLH5	AGFG1_RAT	Agfg1	Arf-GAP domain and FG repeat-containing protein 1	0	QIWLGLFDDR	QIWLGLFDDR	2	QIWLGLFDDR2	7534.56	9896.82	6451.55
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	QIWSLEK	QIWSLEK	2	QIWSLEK2	18757.8	11246.8	21279
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	QIWTVNEALIQK	QIWTVNEALIQK	2	QIWTVNEALIQK2	8459.32	10156	9089.22
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	QIYGCPLGGIGGGTITR	QIYGC(UniMod:4)PLGGIGGGTITR	2	QIYGC(UniMod:4)PLGGIGGGTITR2	17312.2	12819.4	20148.7
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	QIYGCPLGGIGGGTITR	QIYGC(UniMod:4)PLGGIGGGTITR	3	QIYGC(UniMod:4)PLGGIGGGTITR3	9617.55	4247.96	8474.98
F1M1H0	F1M1H0	F1M1H0_RAT	Dera	deoxyribose-phosphate aldolase	1	QIYHHVTGR	QIYHHVTGR	2	QIYHHVTGR2			3114.57
D3ZWA8	D3ZWA8	D3ZWA8_RAT	Appl1	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1	1	QIYLSENPEETAAR	QIYLSENPEETAAR	2	QIYLSENPEETAAR2	7985.07	6823.23	8695.17
B4F779	B4F779	DP13B_RAT	Appl2	DCC-interacting protein 13-beta	1	QIYLTDNPEAVAIK	QIYLTDNPEAVAIK	2	QIYLTDNPEAVAIK2	4660.35	6106.35	3947.25
P62815	P62815	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	1	QIYPPINVLPSLSR	QIYPPINVLPSLSR	2	QIYPPINVLPSLSR2	62678.7	63365.3	78433
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	QIYPQLK	QIYPQLK	2	QIYPQLK2	44352.9	51218.4	51148.6
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	QIYSVDQTR	QIYSVDQTR	2	QIYSVDQTR2	48626.7	39534.2	37031.6
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	QIYSVDQTRR	QIYSVDQTRR	3	QIYSVDQTRR3	32391.1	35130.3	23052.5
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	QKDEDDDEEEDDDVDTMLIMQR	QKDEDDDEEEDDDVDTMLIMQR	3	QKDEDDDEEEDDDVDTMLIMQR3			1985.99
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	QKDVDKEFYLFATVFDENESLLLDDNIR	QKDVDKEFYLFATVFDENESLLLDDNIR	4	QKDVDKEFYLFATVFDENESLLLDDNIR4	7252.71	7851.9	
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	QKDYETATLSEIK	QKDYETATLSEIK	2	QKDYETATLSEIK2	5663.29	9014.36	1566.4
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	QKDYETATLSEIK	QKDYETATLSEIK	3	QKDYETATLSEIK3	33473.4	44669.6	54296.5
F7EUW3	F7EUW3	F7EUW3_RAT	C2cd2l	C2CD2-like	1	QKEAGLSQSHDDLSNTTATPSVR	QKEAGLSQSHDDLSNTTATPSVR	4	QKEAGLSQSHDDLSNTTATPSVR4	1093.96	3644.15	2072.69
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	QKEDLELAMK	QKEDLELAMK	3	QKEDLELAMK3	4698.41		
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	QKEEKPPTLTGQHPPEPR	QKEEKPPTLTGQHPPEPR	3	QKEEKPPTLTGQHPPEPR3	11636.5	21162.4	16756.1
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	QKEEKPPTLTGQHPPEPR	QKEEKPPTLTGQHPPEPR	4	QKEEKPPTLTGQHPPEPR4	399770	308264	295145
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	QKEFDPTITDGSLSVPSR	QKEFDPTITDGSLSVPSR	3	QKEFDPTITDGSLSVPSR3	401330	400035	340698
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	QKEFDPTITDGSLSVPSRR	QKEFDPTITDGSLSVPSRR	3	QKEFDPTITDGSLSVPSRR3	22580.6	34773.3	28507.9
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	QKEFDPTITDGSLSVPSRR	QKEFDPTITDGSLSVPSRR	4	QKEFDPTITDGSLSVPSRR4	109416	185705	117647
P19939	P19939	APOC1_RAT	Apoc1	Apolipoprotein C-I	1	QKEIMIK	QKEIMIK	1	QKEIMIK1	27769.1	27020.2	34562.7
P19939	P19939	APOC1_RAT	Apoc1	Apolipoprotein C-I	1	QKEIMIK	QKEIMIK	2	QKEIMIK2	561509	715666	663899
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	QKENIQHFQAEEEANLLR	QKENIQHFQAEEEANLLR	4	QKENIQHFQAEEEANLLR4	4255.31	8825.23	10452.3
P21670	P21670	PSA4_RAT	Psma4	Proteasome subunit alpha type-4	1	QKEVEQLIK	QKEVEQLIK	2	QKEVEQLIK2	120303	116756	114447
P21670	P21670	PSA4_RAT	Psma4	Proteasome subunit alpha type-4	1	QKEVEQLIKK	QKEVEQLIKK	3	QKEVEQLIKK3	15858.2	16002.8	16678
M0RAX2	M0RAX2	M0RAX2_RAT	Ndufs6l1	NADH dehydrogenase (ubiquinone) Fe-S protein 6	1	QKEVNENFAIDLIAQQPVNEVDHR	QKEVNENFAIDLIAQQPVNEVDHR	4	QKEVNENFAIDLIAQQPVNEVDHR4	11303.8	11487.6	3460.98
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	QKEVQMNFLNQLTSVFNPR	QKEVQMNFLNQLTSVFNPR	3	QKEVQMNFLNQLTSVFNPR3	5786.45	11179.1	8826.3
Q6Q0N1	Q6Q0N1	CNDP2_RAT	Cndp2	Cytosolic non-specific dipeptidase	1	QKLPDGSEIPLPPILLGK	QKLPDGSEIPLPPILLGK	3	QKLPDGSEIPLPPILLGK3	26859.5	28366.8	29928.4
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	QKMPEDGLSEDK	QKMPEDGLSEDK	3	QKMPEDGLSEDK3	13298.2	10466.6	14071.4
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	QKPANILNEAQTK	QKPANILNEAQTK	3	QKPANILNEAQTK3	21807.3	31152.7	43051
P01026	P01026	CO3_RAT	C3	Complement C3	1	QKPDGVFQEDGPVIHQEMIGGFR	QKPDGVFQEDGPVIHQEMIGGFR	3	QKPDGVFQEDGPVIHQEMIGGFR3	628151	638391	521735
P01026	P01026	CO3_RAT	C3	Complement C3	1	QKPDGVFQEDGPVIHQEMIGGFR	QKPDGVFQEDGPVIHQEMIGGFR	4	QKPDGVFQEDGPVIHQEMIGGFR4	2.26696e+06	2.57965e+06	2.22391e+06
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	QKPELLNVVVEGLSTSIVQRPGAQALK	QKPELLNVVVEGLSTSIVQRPGAQALK	4	QKPELLNVVVEGLSTSIVQRPGAQALK4	40032.6	27902.4	30812.9
Q6AYF1	Q6AYF1	SIN1_RAT	Mapkap1	Target of rapamycin complex 2 subunit MAPKAP1	1	QKPISIDCDLLCACDLAEEK	QKPISIDC(UniMod:4)DLLC(UniMod:4)AC(UniMod:4)DLAEEK	3	QKPISIDC(UniMod:4)DLLC(UniMod:4)AC(UniMod:4)DLAEEK3	2678.58		3578.75
Q8CFN2	Q8CFN2	CDC42_RAT	Cdc42	Cell division control protein 42 homolog	1	QKPITPETAEK	QKPITPETAEK	2	QKPITPETAEK2	248270	145816	202590
Q8CFN2	Q8CFN2	CDC42_RAT	Cdc42	Cell division control protein 42 homolog	1	QKPITPETAEK	QKPITPETAEK	3	QKPITPETAEK3	598138	692812	694060
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	QKPLPPLSVLGPPPSK	QKPLPPLSVLGPPPSK	3	QKPLPPLSVLGPPPSK3	70934.9	70291	58755.6
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	QKPQTAEEAFHSIGEGFLLLLGK	QKPQTAEEAFHSIGEGFLLLLGK	3	QKPQTAEEAFHSIGEGFLLLLGK3	34862	38862.2	23834.9
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	QKPQTAEEAFHSIGEGFLLLLGK	QKPQTAEEAFHSIGEGFLLLLGK	4	QKPQTAEEAFHSIGEGFLLLLGK4	38882.2	60252.4	34109.6
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	QKPVLQK	QKPVLQK	2	QKPVLQK2			48611.3
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	QKVAQLEAQCQEPCKDSVR	QKVAQLEAQC(UniMod:4)QEPC(UniMod:4)KDSVR	4	QKVAQLEAQC(UniMod:4)QEPC(UniMod:4)KDSVR4		14375.9	17436.8
A0A0G2K543	A0A0G2K543	A0A0G2K543_RAT	C2cd5	C2 calcium-dependent domain containing 5	1	QKVPDVLFTTIDLPTDAVVVGK	QKVPDVLFTTIDLPTDAVVVGK	3	QKVPDVLFTTIDLPTDAVVVGK3	10864.7	6765.17	7859.82
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	QLAAEQEK	QLAAEQEK	2	QLAAEQEK2	28749.9	27383	13370.7
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	QLAAEQEKDIR	QLAAEQEKDIR	2	QLAAEQEKDIR2	6041.42	10383.4	8133.76
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	QLAAEQEKDIR	QLAAEQEKDIR	3	QLAAEQEKDIR3	37657.8	37412.7	39439.9
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	QLAAGQPYTR	QLAAGQPYTR	2	QLAAGQPYTR2	39292.4	28737.5	30240.5
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	QLAAGSIADCLAK	QLAAGSIADC(UniMod:4)LAK	2	QLAAGSIADC(UniMod:4)LAK2	679047	540119	555635
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	QLAALGQNEPLPAEAPWAR	QLAALGQNEPLPAEAPWAR	3	QLAALGQNEPLPAEAPWAR3	86984.7	98772.1	100381
Q9JLT6	Q9JLT6	BID_RAT	Bid	BH3-interacting domain death agonist	1	QLAAQFMNGSLSEEDKR	QLAAQFMNGSLSEEDKR	3	QLAAQFMNGSLSEEDKR3	20015.8	11347.5	4845.28
Q66HA4	Q66HA4	TAXB1_RAT	Tax1bp1	Tax1-binding protein 1 homolog	1	QLADTLAELQLHAVK	QLADTLAELQLHAVK	3	QLADTLAELQLHAVK3			4934.48
B4F779	B4F779	DP13B_RAT	Appl2	DCC-interacting protein 13-beta	1	QLADTMVLPVIQFR	QLADTMVLPVIQFR	2	QLADTMVLPVIQFR2	5266.06		5391.89
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	QLAEEETK	QLAEEETK	2	QLAEEETK2	11170.4	16442.6	15991.5
A0A8I5Y9E9	A0A8I5Y9E9	A0A8I5Y9E9_RAT	Trem2	Triggering receptor expressed on myeloid cells 2	1	QLAEEGPCQR	QLAEEGPC(UniMod:4)QR	2	QLAEEGPC(UniMod:4)QR2	84375.8	65277	70980
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	QLAEILLR	QLAEILLR	2	QLAEILLR2	27741.2	23928	22196.5
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	QLAELAISK	QLAELAISK	2	QLAELAISK2	127573	130930	153020
Q5XIN4	Q5XIN4	Q5XIN4_RAT	Mtmr9	Myotubularin related protein 9	1	QLAELETEDGLR	QLAELETEDGLR	2	QLAELETEDGLR2	2720.78	3057.59	4778.82
A0A8I6GBD2	A0A8I6GBD2	A0A8I6GBD2_RAT	Actr10	Actin related protein 10	1	QLAENLVIIGGTSMLPGFLHR	QLAENLVIIGGTSMLPGFLHR	3	QLAENLVIIGGTSMLPGFLHR3	20101.6	27439.8	27323.7
P0C0A2	P0C0A2	VPS36_RAT	Vps36	Vacuolar protein-sorting-associated protein 36	1	QLAGILQAPLEER	QLAGILQAPLEER	2	QLAGILQAPLEER2	12106.4	10091.9	6527.95
D3ZZL3	D3ZZL3	D3ZZL3_RAT	Naglu	N-acetyl-alpha-glucosaminidase	1	QLAGLVADYYQPR	QLAGLVADYYQPR	2	QLAGLVADYYQPR2	12853.3	20080.6	13351.1
A0A0G2K0W3	A0A0G2K0W3	A0A0G2K0W3_RAT	Ttyh3	Protein tweety homolog	1	QLAGRPEPLR	QLAGRPEPLR	2	QLAGRPEPLR2	2731.78	2367.04	
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	QLAHPFSLAIYEDK	QLAHPFSLAIYEDK	3	QLAHPFSLAIYEDK3	60012	69267.3	65111.7
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	QLAIFCPHEALR	QLAIFC(UniMod:4)PHEALR	2	QLAIFC(UniMod:4)PHEALR2	11319.4	9724.03	5822.45
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	QLAIFCPHEALR	QLAIFC(UniMod:4)PHEALR	3	QLAIFC(UniMod:4)PHEALR3	103350	122486	103059
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	QLAILDK	QLAILDK	1	QLAILDK1	208389	240983	213484
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	QLAILDK	QLAILDK	2	QLAILDK2	1.05883e+07	1.23917e+07	1.15835e+07
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	QLAILDKTMK	QLAILDKTMK	3	QLAILDKTMK3	13667.3	14287.7	15762.2
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	QLALAEGKPIETPK	QLALAEGKPIETPK	3	QLALAEGKPIETPK3	44439.6	25901	40292.4
D4A929	D4A929	WDR81_RAT	Wdr81	WD repeat-containing protein 81	1	QLALAPGGTHVVALVSTR	QLALAPGGTHVVALVSTR	3	QLALAPGGTHVVALVSTR3	9835.47	11759.1	12627.7
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	QLALDHFK	QLALDHFK	2	QLALDHFK2	35623.9	17738.6	24829
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	QLALFLAR	QLALFLAR	2	QLALFLAR2	98167	95699.4	97783.3
F7EQF3	F7EQF3	F7EQF3_RAT	Bak1	BCL2-antagonist/killer 1	1	QLALIGDDINR	QLALIGDDINR	2	QLALIGDDINR2	30740.3	28721.2	20881.4
F7EQF3	F7EQF3	F7EQF3_RAT	Bak1	BCL2-antagonist/killer 1	1	QLALIGDDINRR	QLALIGDDINRR	3	QLALIGDDINRR3	34291.8	44493.7	26472.4
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	QLALWNPK	QLALWNPK	1	QLALWNPK1	5062.69	7553.9	5921.09
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	QLALWNPK	QLALWNPK	2	QLALWNPK2	692268	716623	674959
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	QLANITMGLPLSPAADSAR	QLANITMGLPLSPAADSAR	2	QLANITMGLPLSPAADSAR2	7501.98	10771.9	10406.5
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	QLANITMGLPLSPAADSAR	QLANITMGLPLSPAADSAR	3	QLANITMGLPLSPAADSAR3	4151.19	4426.68	
Q99N37	F1LQX4;Q99N37	RHG17_RAT	Arhgap17	Rho GTPase-activating protein 17	0	QLANQTVGR	QLANQTVGR	2	QLANQTVGR2	10521.9	7577.21	8335.81
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	QLANSLESAGPTDYLLPSCGIIASAPR	QLANSLESAGPTDYLLPSC(UniMod:4)GIIASAPR	3	QLANSLESAGPTDYLLPSC(UniMod:4)GIIASAPR3	31177.6	12691.7	37451.8
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	QLANYNFDFR	QLANYNFDFR	2	QLANYNFDFR2	33979.9	30145	31043.7
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	QLAPIWDK	QLAPIWDK	1	QLAPIWDK1	17253.2	26702.7	21207.3
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	QLAPIWDK	QLAPIWDK	2	QLAPIWDK2	1.49378e+06	1.61295e+06	1.56883e+06
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	QLAPNKPS	QLAPNKPS	2	QLAPNKPS2	55874	53126.6	65550.9
O08773	O08773	RGS14_RAT	Rgs14	Regulator of G-protein signaling 14	1	QLAQEAHNIYHEFLSSQALSPVNIDR	QLAQEAHNIYHEFLSSQALSPVNIDR	4	QLAQEAHNIYHEFLSSQALSPVNIDR4	10650.3	12286.3	22326.1
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	QLAQELR	QLAQELR	2	QLAQELR2		18374.3	13327
A0A8I5ZP83	D4A9Z8;A0A8I5ZP83	A0A8I5ZP83_RAT	Chmp4b	Charged multivesicular body protein 4B	0	QLAQIDGTLSTIEFQR	QLAQIDGTLSTIEFQR	2	QLAQIDGTLSTIEFQR2	21665.4	19898.7	16977.3
A0A8I5ZP83	D4A9Z8;A0A8I5ZP83	A0A8I5ZP83_RAT	Chmp4b	Charged multivesicular body protein 4B	0	QLAQIDGTLSTIEFQR	QLAQIDGTLSTIEFQR	3	QLAQIDGTLSTIEFQR3	37131.1	50986.3	35644
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	QLAQLINEK	QLAQLINEK	2	QLAQLINEK2	8946.57	7928.65	10199
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	QLAQVATFATK	QLAQVATFATK	2	QLAQVATFATK2	86390.2	95814	77412.5
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	QLAQYHAK	QLAQYHAK	2	QLAQYHAK2	32442.8	26631	13045
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	QLASEEDGSPAPSLFK	QLASEEDGSPAPSLFK	2	QLASEEDGSPAPSLFK2	7206.02	8284.93	6768.18
D3ZYF5	D3ZYF5	D3ZYF5_RAT	Trim58	Tripartite motif-containing 58	1	QLASLVDTVR	QLASLVDTVR	2	QLASLVDTVR2	18431.2	18010.4	23807.5
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	QLASVILK	QLASVILK	2	QLASVILK2	25397.7	31460.6	26775.4
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	QLASVPSSQLCVK	QLASVPSSQLC(UniMod:4)VK	2	QLASVPSSQLC(UniMod:4)VK2	12070.5	10298.8	10979.2
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	QLATVCK	QLATVC(UniMod:4)K	2	QLATVC(UniMod:4)K2	46699.1	34960.5	39763.6
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	QLAWAMHFLEEK	QLAWAMHFLEEK	2	QLAWAMHFLEEK2		25580.4	22690
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	QLAWAMHFLEEK	QLAWAMHFLEEK	3	QLAWAMHFLEEK3	15848	22715.8	13287.4
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	QLAWVGDGVWVSIR	QLAWVGDGVWVSIR	2	QLAWVGDGVWVSIR2	7438.2	3403.07	10266.6
A0A8I6AEI1	A0A8I6AEI1	A0A8I6AEI1_RAT	Hps1	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1	1	QLCAIYR	QLC(UniMod:4)AIYR	2	QLC(UniMod:4)AIYR2	8645.95	19574.1	6314.61
A0A8I6AVC5	A0A8I6AVC5	A0A8I6AVC5_RAT	Ltbp3	Latent transforming growth factor beta binding protein 3	1	QLCCCSVGK	QLC(UniMod:4)C(UniMod:4)C(UniMod:4)SVGK	2	QLC(UniMod:4)C(UniMod:4)C(UniMod:4)SVGK2	122097	129899	114007
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	QLCDNAGFDATNILNK	QLC(UniMod:4)DNAGFDATNILNK	2	QLC(UniMod:4)DNAGFDATNILNK2	125267	124133	120058
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	QLCDNAGFDATNILNK	QLC(UniMod:4)DNAGFDATNILNK	3	QLC(UniMod:4)DNAGFDATNILNK3	26517.5	28854.5	27005.9
A0A8I5Y176	A0A8I5Y176	A0A8I5Y176_RAT	Ranbp9	RAN binding protein 9	1	QLCGGSQAAIER	QLC(UniMod:4)GGSQAAIER	2	QLC(UniMod:4)GGSQAAIER2	1971.61	2394.99	3380.36
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	QLCPEPAK	QLC(UniMod:4)PEPAK	2	QLC(UniMod:4)PEPAK2	7470.34	8941.06	8182.65
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	QLCPTDK	QLC(UniMod:4)PTDK	2	QLC(UniMod:4)PTDK2		69825.1	
A0A0G2QC40	A0A0G2QC40	A0A0G2QC40_RAT	Mkrn1	RING-type E3 ubiquitin transferase	1	QLCPYAAVGECR	QLC(UniMod:4)PYAAVGEC(UniMod:4)R	2	QLC(UniMod:4)PYAAVGEC(UniMod:4)R2	16092.2	23826	15206.8
P14423	P14423	PA2GA_RAT	Pla2g2a	Phospholipase A2, membrane associated	1	QLCQCDK	QLC(UniMod:4)QC(UniMod:4)DK	1	QLC(UniMod:4)QC(UniMod:4)DK1			25389.4
P14423	P14423	PA2GA_RAT	Pla2g2a	Phospholipase A2, membrane associated	1	QLCQCDK	QLC(UniMod:4)QC(UniMod:4)DK	2	QLC(UniMod:4)QC(UniMod:4)DK2			67483.7
A0A8I6ASK1	A0A8I6ASK1	A0A8I6ASK1_RAT	P4ha2	procollagen-proline 4-dioxygenase	1	QLDAGEEATVTK	QLDAGEEATVTK	2	QLDAGEEATVTK2	7446.92	17297.9	11136.7
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	QLDAISQK	QLDAISQK	2	QLDAISQK2	43839.2	42899	31207.1
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	QLDALEHSGVLLEEK	QLDALEHSGVLLEEK	3	QLDALEHSGVLLEEK3	21697.9	22132.2	24974.4
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QLDALEK	QLDALEK	1	QLDALEK1	2024.06	1558.63	
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QLDALEK	QLDALEK	2	QLDALEK2	119570	117894	133705
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	QLDDKDEEINQQSQLVEK	QLDDKDEEINQQSQLVEK	3	QLDDKDEEINQQSQLVEK3	29353.3	32906.2	29561.8
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QLDDLNMR	QLDDLNMR	2	QLDDLNMR2	141812	133140	139726
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	QLDDYSSSVANFLQAR	QLDDYSSSVANFLQAR	2	QLDDYSSSVANFLQAR2	5352.88	6426.22	10223.9
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	QLDEANALLR	QLDEANALLR	2	QLDEANALLR2	93722.3	91926	102403
D3ZAE6	D3ZAE6	D3ZAE6_RAT	Vasn	Vasorin	1	QLDEGLFGR	QLDEGLFGR	2	QLDEGLFGR2	8671.35	11504.4	10484.7
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	QLDFNSSK	QLDFNSSK	2	QLDFNSSK2	196765	219694	187032
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	QLDHPLPTVHPQVTYAYMK	QLDHPLPTVHPQVTYAYMK	4	QLDHPLPTVHPQVTYAYMK4	16354.2	11368.8	7354.55
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	QLDLELK	QLDLELK	2	QLDLELK2	9490.31	11244	6178.24
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	QLDLQGELRR	QLDLQGELRR	3	QLDLQGELRR3	3089.08	3520.76	5044
Q62902	Q62902	LMAN1_RAT	Lman1	Protein ERGIC-53	1	QLDMILDEQR	QLDMILDEQR	2	QLDMILDEQR2	27433.9	18227.1	30516.6
Q62902	Q62902	LMAN1_RAT	Lman1	Protein ERGIC-53	1	QLDMILDEQRR	QLDMILDEQRR	2	QLDMILDEQRR2	3110.64	3379.09	7061.11
Q62902	Q62902	LMAN1_RAT	Lman1	Protein ERGIC-53	1	QLDMILDEQRR	QLDMILDEQRR	3	QLDMILDEQRR3	71561.3	108698	161552
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	QLDNAVSAFR	QLDNAVSAFR	2	QLDNAVSAFR2	44550.6	39778.9	36586
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	QLDNILAAVHDVLNESSK	QLDNILAAVHDVLNESSK	3	QLDNILAAVHDVLNESSK3	4585.67		
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	QLDNPAR	QLDNPAR	2	QLDNPAR2	367558	356328	375561
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	QLDPNEMR	QLDPNEMR	2	QLDPNEMR2		12119	5639.39
Q8VHV8	Q8VHV8	SELS_RAT	Selenos	Selenoprotein S	1	QLDQAEAVLEPDVVVK	QLDQAEAVLEPDVVVK	2	QLDQAEAVLEPDVVVK2	7712.43	7608.4	10494.9
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QLDQCTTFANEIETIESSLK	QLDQC(UniMod:4)TTFANEIETIESSLK	3	QLDQC(UniMod:4)TTFANEIETIESSLK3		7585.69	16789.1
D4ACC1	D4ACC1	D4ACC1_RAT	Dapp1	Dual adaptor of phosphotyrosine and 3-phosphoinositides 1	1	QLDQDDTIR	QLDQDDTIR	2	QLDQDDTIR2	4178.22	9189.61	2672.33
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	QLDQHLDILK	QLDQHLDILK	3	QLDQHLDILK3		3185.75	
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	QLDQQVEVFR	QLDQQVEVFR	2	QLDQQVEVFR2	99430.3	110621	69613.8
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	QLDQQVEVFR	QLDQQVEVFR	3	QLDQQVEVFR3	386107	362279	384381
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	QLDQQVEVFRR	QLDQQVEVFRR	2	QLDQQVEVFRR2	87994.8	64943.8	97606.6
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	QLDQQVEVFRR	QLDQQVEVFRR	3	QLDQQVEVFRR3	1.83475e+06	2.47444e+06	2.61207e+06
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	QLDSSNSTIAILQTEK	QLDSSNSTIAILQTEK	2	QLDSSNSTIAILQTEK2	14789	14023.1	16390.5
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	QLDSSNSTIAILQTEK	QLDSSNSTIAILQTEK	3	QLDSSNSTIAILQTEK3	11442.7	12600.2	12059
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	QLDSSNSTIAILQTEKDK	QLDSSNSTIAILQTEKDK	3	QLDSSNSTIAILQTEKDK3	73729.3	71531	90472.8
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	QLDVLAQQIATLCATLQEYPSIR	QLDVLAQQIATLC(UniMod:4)ATLQEYPSIR	3	QLDVLAQQIATLC(UniMod:4)ATLQEYPSIR3	8476.41		
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	QLDVYNLTAR	QLDVYNLTAR	2	QLDVYNLTAR2	8148.14	11767.1	9896.48
D4AA91	A0A8I6A742;D4AA91	D4AA91_RAT	Cers5	Ceramide synthase 5	0	QLDWDVR	QLDWDVR	2	QLDWDVR2	6280.47	9746.55	
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	QLDWPDPEEAFMITVK	QLDWPDPEEAFMITVK	2	QLDWPDPEEAFMITVK2	41037.7	27996.2	42287.5
D4A2G6	D4A2G6	D4A2G6_RAT	Thbs2	Thrombospondin 2	1	QLDYDKDEVGDR	QLDYDKDEVGDR	3	QLDYDKDEVGDR3	7998.71	5227.31	11172.2
P54645	P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	1	QLDYEWK	QLDYEWK	2	QLDYEWK2	16602.3	31456.2	33314
O70257	O70257	STX7_RAT	Stx7	Syntaxin-7	1	QLEADIMDINEIFK	QLEADIMDINEIFK	2	QLEADIMDINEIFK2	27597.6	19697.4	25702.3
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	QLEAEADAIIQMVR	QLEAEADAIIQMVR	2	QLEAEADAIIQMVR2	7567.56	929.174	6160.26
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	QLEAEADAIIQMVR	QLEAEADAIIQMVR	3	QLEAEADAIIQMVR3	8593.63	8156.48	7719.32
A2VD12	A2VD12	PBIP1_RAT	Pbxip1	Pre-B-cell leukemia transcription factor-interacting protein 1	1	QLEAEAK	QLEAEAK	1	QLEAEAK1	7967.43		2741.03
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	QLEAENTEEAQK	QLEAENTEEAQK	2	QLEAENTEEAQK2	21449.6	25525.2	15754.4
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	QLEAMVQQDPR	QLEAMVQQDPR	2	QLEAMVQQDPR2	13532.4	10791.6	8837.86
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	QLEDALK	QLEDALK	2	QLEDALK2	9082.22	9518.29	14425
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	QLEDALKDVQK	QLEDALKDVQK	3	QLEDALKDVQK3	22238	16232.8	15971.8
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	QLEDCLILQTLLHSR	QLEDC(UniMod:4)LILQTLLHSR	3	QLEDC(UniMod:4)LILQTLLHSR3	17966.4	18195.7	13518.5
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	QLEDELQDLASK	QLEDELQDLASK	2	QLEDELQDLASK2	39207.4	54092.8	43964.9
P04692	P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	1	QLEDELVSLQK	QLEDELVSLQK	2	QLEDELVSLQK2	255633	242060	266830
P04692	P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	1	QLEDELVSLQK	QLEDELVSLQK	3	QLEDELVSLQK3	6291.92	6084.3	10325.5
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QLEDILVLAK	QLEDILVLAK	2	QLEDILVLAK2	36480.7	27032.3	27931.9
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	QLEDTVTLR	QLEDTVTLR	2	QLEDTVTLR2	52416.5	50865.6	39777.1
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QLEEAEEEAQR	QLEEAEEEAQR	2	QLEEAEEEAQR2	7391.28	2.63372e+06	2.704e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QLEEAEEEAQR	QLEEAEEEAQR	3	QLEEAEEEAQR3	353244	417453	457164
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QLEEAEEEAQRANASR	QLEEAEEEAQRANASR	3	QLEEAEEEAQRANASR3	7447.48	13321	16717.5
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	QLEEAENELK	QLEEAENELK	2	QLEEAENELK2	62770.3	81497.3	77110.3
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	QLEEAENELKR	QLEEAENELKR	3	QLEEAENELKR3	4459.64	11881.3	6606.85
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	QLEEAER	QLEEAER	2	QLEEAER2	142313	169467	139841
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	QLEEAERQEK	QLEEAERQEK	2	QLEEAERQEK2			3433.09
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	QLEEAERQEK	QLEEAERQEK	3	QLEEAERQEK3			35148.2
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	QLEEALETLK	QLEEALETLK	2	QLEEALETLK2	7809.76	10573.8	8158.16
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	QLEEDLYDGQVLQK	QLEEDLYDGQVLQK	2	QLEEDLYDGQVLQK2	328626	303227	337266
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	QLEEDLYDGQVLQK	QLEEDLYDGQVLQK	3	QLEEDLYDGQVLQK3	58655.6	45982.2	48994.8
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	QLEEEDGSR	QLEEEDGSR	2	QLEEEDGSR2	25195.3	27747.3	24229.1
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	QLEEEDGSRDSPLFDFIESCLR	QLEEEDGSRDSPLFDFIESC(UniMod:4)LR	3	QLEEEDGSRDSPLFDFIESC(UniMod:4)LR3	4250.95	5538.25	6840.36
A0A8I5YC74	A0A8I5YC74	A0A8I5YC74_RAT	ENSRNOG00000066004	Tropomyosin	1	QLEEELR	QLEEELR	2	QLEEELR2	1.10946e+06	1.1004e+06	1.27713e+06
P58775	P58775	TPM2_RAT	Tpm2	Tropomyosin beta chain	1	QLEEEQQALQK	QLEEEQQALQK	2	QLEEEQQALQK2	417524	412339	446505
P58775	P58775	TPM2_RAT	Tpm2	Tropomyosin beta chain	1	QLEEEQQALQK	QLEEEQQALQK	3	QLEEEQQALQK3	90816.6	79718.7	102259
P58775	P58775	TPM2_RAT	Tpm2	Tropomyosin beta chain	1	QLEEEQQALQKK	QLEEEQQALQKK	3	QLEEEQQALQKK3	14925.2	26240.8	18491.6
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	QLEELEEEFCR	QLEELEEEFC(UniMod:4)R	2	QLEELEEEFC(UniMod:4)R2	21973.7	23681.8	23532.1
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	QLEEQNAR	QLEEQNAR	2	QLEEQNAR2	36066		10694.9
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	QLEEQSAAASEEALFPFCR	QLEEQSAAASEEALFPFC(UniMod:4)R	3	QLEEQSAAASEEALFPFC(UniMod:4)R3	8081.08	8761.38	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QLEESASHLACFQAAESQLRPWLMEK	QLEESASHLAC(UniMod:4)FQAAESQLRPWLMEK	4	QLEESASHLAC(UniMod:4)FQAAESQLRPWLMEK4	14171.9	13201.2	16057.1
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	QLEESVDSLGEELVQLR	QLEESVDSLGEELVQLR	2	QLEESVDSLGEELVQLR2	18847.2	12483.5	22025.2
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	QLEESVDSLGEELVQLR	QLEESVDSLGEELVQLR	3	QLEESVDSLGEELVQLR3	23155	22473.2	17752.6
Q9QZL2	Q9QZL2	CHST3_RAT	Chst3	Carbohydrate sulfotransferase 3	1	QLEFLQPLAEDPR	QLEFLQPLAEDPR	2	QLEFLQPLAEDPR2	27569.8	30745.7	26531
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	QLEGTECPLHVVHPPTGEEFALGCGVCR	QLEGTEC(UniMod:4)PLHVVHPPTGEEFALGC(UniMod:4)GVC(UniMod:4)R	4	QLEGTEC(UniMod:4)PLHVVHPPTGEEFALGC(UniMod:4)GVC(UniMod:4)R4	13710.6	13191.2	19068.3
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	QLEILQLAQAQGLDPPSHHFELK	QLEILQLAQAQGLDPPSHHFELK	3	QLEILQLAQAQGLDPPSHHFELK3	8028.9	8465.2	12670.2
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	QLEILQLAQAQGLDPPSHHFELK	QLEILQLAQAQGLDPPSHHFELK	4	QLEILQLAQAQGLDPPSHHFELK4	43845.8	33470.6	42951.3
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	QLEILQQQLLHEQALLLEYK	QLEILQQQLLHEQALLLEYK	3	QLEILQQQLLHEQALLLEYK3	14490.6	13936.5	27337.4
A0A0G2K516	A0A0G2K516	A0A0G2K516_RAT	Stx11	Syntaxin 11	1	QLEIMGK	QLEIMGK	1	QLEIMGK1	3220.16	6598.96	3125.87
A0A0G2K516	A0A0G2K516	A0A0G2K516_RAT	Stx11	Syntaxin 11	1	QLEIMGK	QLEIMGK	2	QLEIMGK2	370483	277443	324345
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	QLELENLATQEAR	QLELENLATQEAR	2	QLELENLATQEAR2	64007.1	49401.1	58064.1
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	QLELENLATQEAR	QLELENLATQEAR	3	QLELENLATQEAR3	7431.91	6766.86	15610.3
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	QLELESELQSLQK	QLELESELQSLQK	2	QLELESELQSLQK2	4073.55	6154.96	
P50745	P50745	SH2B3_RAT	Sh2b3	SH2B adapter protein 3	1	QLELESVSSAR	QLELESVSSAR	2	QLELESVSSAR2	3544.16	6634.13	6029.87
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	QLELLAQDYK	QLELLAQDYK	2	QLELLAQDYK2	28908	38221.1	32348
Q62931	Q62931	GOSR1_RAT	Gosr1	Golgi SNAP receptor complex member 1	1	QLENELDLK	QLENELDLK	2	QLENELDLK2	15930	9492.22	17810.6
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	QLENELEGLK	QLENELEGLK	2	QLENELEGLK2	10439.7	12731	11262.2
A0A8I5ZQ24	A0A8I5ZQ24	A0A8I5ZQ24_RAT	Atp6v1h	V-type proton ATPase subunit H	1	QLENLEQQK	QLENLEQQK	2	QLENLEQQK2	8361.38	7560.67	10246.4
Q5XHY5	Q5XHY5	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	1	QLENSLNEFGEK	QLENSLNEFGEK	2	QLENSLNEFGEK2	12910.3		16919.1
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	QLEPLVAPLADGK	QLEPLVAPLADGK	2	QLEPLVAPLADGK2	8640.38	19393.7	17740.1
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	QLEPVYTSLGK	QLEPVYTSLGK	2	QLEPVYTSLGK2	1.57191e+06	1.55674e+06	1.56004e+06
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	QLEPVYTSLGKK	QLEPVYTSLGKK	3	QLEPVYTSLGKK3		2222.58	4382.49
D3ZF97	D3ZF97	D3ZF97_RAT	Erlec1	Endoplasmic reticulum lectin	1	QLEQQEEILR	QLEQQEEILR	2	QLEQQEEILR2	6687.97	10067.4	10870.2
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	QLEQQSAVCEGEGQVTSTSESTR	QLEQQSAVC(UniMod:4)EGEGQVTSTSESTR	3	QLEQQSAVC(UniMod:4)EGEGQVTSTSESTR3	33041.5	28900.6	27269
Q6Y1S1	Q6Y1S1	MYD88_RAT	Myd88	Myeloid differentiation primary response protein MyD88	1	QLEQTDYR	QLEQTDYR	2	QLEQTDYR2	1749.84	7354.51	1942.75
Q9JHU5	Q9JHU5	ARFP1_RAT	Arfip1	Arfaptin-1	1	QLEQTLK	QLEQTLK	2	QLEQTLK2	14921.6	15721.9	18723.7
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	QLEQVEEK	QLEQVEEK	2	QLEQVEEK2	3833.35	8302.58	9083.49
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	QLEQVIAK	QLEQVIAK	1	QLEQVIAK1	434876	368476	382184
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	QLEQVIAK	QLEQVIAK	2	QLEQVIAK2	2.61449e+07	65718.5	66713.9
Q6TMG5	Q6TMG5	NEMO_RAT	Ikbkg	NF-kappa-B essential modulator	1	QLESEREVLQQQHSVQVDQLR	QLESEREVLQQQHSVQVDQLR	4	QLESEREVLQQQHSVQVDQLR4	1767.39	5401.46	
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	QLESGGFEAR	QLESGGFEAR	2	QLESGGFEAR2	7382.94	8455.92	12394.8
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	QLESLGISLQTSGIK	QLESLGISLQTSGIK	2	QLESLGISLQTSGIK2	11076.8	9057.84	9476.74
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	QLESNKIPEVDLAR	QLESNKIPEVDLAR	2	QLESNKIPEVDLAR2	47028.2	36567.6	29845
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	QLESNKIPEVDLAR	QLESNKIPEVDLAR	3	QLESNKIPEVDLAR3	497968	725671	753339
G3V7L1	G3V7L1;P11530	UTRN_RAT	Utrn	Utrophin	0	QLESQLHR	QLESQLHR	2	QLESQLHR2	16908	19835.9	6967.7
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	QLESSQAR	QLESSQAR	2	QLESSQAR2			29704.7
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	QLESTQTESNK	QLESTQTESNK	2	QLESTQTESNK2			6093.67
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	QLESTQTESNKK	QLESTQTESNKK	3	QLESTQTESNKK3			43625.2
Q63737	Q63737	PHLP_RAT	Pdcl	Phosducin-like protein	1	QLETEQREEQCR	QLETEQREEQC(UniMod:4)R	3	QLETEQREEQC(UniMod:4)R3	11914.6		30631.7
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	QLETIDQLHLEYAK	QLETIDQLHLEYAK	2	QLETIDQLHLEYAK2	42022.7	47973.7	46461.1
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	QLETIDQLHLEYAK	QLETIDQLHLEYAK	3	QLETIDQLHLEYAK3	389540	404102	399135
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	QLETVLDDLDPENALLPAGFR	QLETVLDDLDPENALLPAGFR	3	QLETVLDDLDPENALLPAGFR3	79306.7	76493.7	86928.3
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	QLEVEPEGLEPEAENK	QLEVEPEGLEPEAENK	2	QLEVEPEGLEPEAENK2	21863.7	19139.7	26476.1
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	QLEVVHTLDGK	QLEVVHTLDGK	3	QLEVVHTLDGK3	19034	10507	13399.4
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	QLEVYTSGGDPESVAGEYGR	QLEVYTSGGDPESVAGEYGR	3	QLEVYTSGGDPESVAGEYGR3	43469.5	44988.8	28709
P04897	P04897	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	1	QLFALSCAAEEQGMLPEDLSGVIR	QLFALSC(UniMod:4)AAEEQGMLPEDLSGVIR	3	QLFALSC(UniMod:4)AAEEQGMLPEDLSGVIR3	397240	471711	437119
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	QLFAYPGCDAGIR	QLFAYPGC(UniMod:4)DAGIR	2	QLFAYPGC(UniMod:4)DAGIR2	19323.1	25781.3	11195.7
P53812	P53812	PIPNB_RAT	Pitpnb	Phosphatidylinositol transfer protein beta isoform	1	QLFCWIDK	QLFC(UniMod:4)WIDK	2	QLFC(UniMod:4)WIDK2		17192.1	25054.1
P16446	P16446	PIPNA_RAT	Pitpna	Phosphatidylinositol transfer protein alpha isoform	1	QLFCWLDK	QLFC(UniMod:4)WLDK	2	QLFC(UniMod:4)WLDK2	22565.2		
O35763	O35763;P31977;Q5PQK5	MOES_RAT	Msn	Moesin	0	QLFDQVVK	QLFDQVVK	2	QLFDQVVK2	189672	169147	170717
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	QLFDVVIVQADKPNFFTDR	QLFDVVIVQADKPNFFTDR	3	QLFDVVIVQADKPNFFTDR3	22365.4	21083	20264.5
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	QLFEEQAK	QLFEEQAK	2	QLFEEQAK2	48401.1	23615.2	36681.5
Q5QJC9	Q5QJC9	BAG5_RAT	Bag5	BAG family molecular chaperone regulator 5	1	QLFEIDSVDTEGK	QLFEIDSVDTEGK	2	QLFEIDSVDTEGK2	10628.8	8629.49	7615.74
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	QLFHLIYGQPDVVR	QLFHLIYGQPDVVR	2	QLFHLIYGQPDVVR2	4249.52		6587.01
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	QLFHLIYGQPDVVR	QLFHLIYGQPDVVR	3	QLFHLIYGQPDVVR3	57982.4	47021.3	63525
Q5XIF6	A0A8I6AF82;P68370;Q5XIF6;Q68FR8;A0A8I5Y4J3;Q6AYZ1;Q6P9V9;Q6AY56	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	QLFHPEQLITGK	QLFHPEQLITGK	2	QLFHPEQLITGK2	3.56325e+06	3.46243e+06	3.46275e+06
Q5XIF6	A0A8I6AF82;P68370;Q5XIF6;Q68FR8;A0A8I5Y4J3;Q6AYZ1;Q6P9V9;Q6AY56	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	QLFHPEQLITGK	QLFHPEQLITGK	3	QLFHPEQLITGK3	72242.4	1.87436e+07	2.08383e+07
Q5XIF6	P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9;Q6AY56	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	QLFHPEQLITGKEDAANNYAR	QLFHPEQLITGKEDAANNYAR	3	QLFHPEQLITGKEDAANNYAR3	317238	394732	415290
Q5XIF6	P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9;Q6AY56	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	QLFHPEQLITGKEDAANNYAR	QLFHPEQLITGKEDAANNYAR	4	QLFHPEQLITGKEDAANNYAR4	1.20705e+06	1.72819e+06	1.68728e+06
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	QLFIPFAEAEADKEELR	QLFIPFAEAEADKEELR	3	QLFIPFAEAEADKEELR3	64497.8	38278.1	60265.4
A0A8I6AU33	A0A8I6AU33	A0A8I6AU33_RAT	Gpr89b	G protein-coupled receptor 89B	1	QLFLETADLYATK	QLFLETADLYATK	2	QLFLETADLYATK2	6558.83	7641.63	4769.24
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	QLFLITNSPFSFVDK	QLFLITNSPFSFVDK	2	QLFLITNSPFSFVDK2		9865.94	11380
Q08326	A0A8I6GKW6;Q08326	MSS4_RAT	Rabif	Guanine nucleotide exchange factor MSS4	0	QLFLPSMR	QLFLPSMR	2	QLFLPSMR2	15976.6	20217.7	12890.3
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	QLFLQTYAR	QLFLQTYAR	2	QLFLQTYAR2	145679	184209	159314
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	QLFNCQSLHK	QLFNC(UniMod:4)QSLHK	2	QLFNC(UniMod:4)QSLHK2	33910.3	29449.5	24695.9
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	QLFNCQSLHK	QLFNC(UniMod:4)QSLHK	3	QLFNC(UniMod:4)QSLHK3	194467	202913	239943
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	QLFQLDSPATPEK	QLFQLDSPATPEK	2	QLFQLDSPATPEK2	86001.9	92947.1	80959.1
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	QLFQSHDSPVK	QLFQSHDSPVK	3	QLFQSHDSPVK3	10693.8	11726	4859.79
P24473	P24473	GSTK1_RAT	Gstk1	Glutathione S-transferase kappa 1	1	QLFQVPMSVPK	QLFQVPMSVPK	2	QLFQVPMSVPK2	75259.9	79604.4	65893.7
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	QLFRPIEELK	QLFRPIEELK	2	QLFRPIEELK2	8046.35	3904.53	4460
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	QLFRPIEELK	QLFRPIEELK	3	QLFRPIEELK3	89118.7	101627	73330
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	QLFRPIEELKK	QLFRPIEELKK	3	QLFRPIEELKK3	13072.8	9939.01	
P08753	P08753	GNAI3_RAT	Gnai3	Guanine nucleotide-binding protein G(i) subunit alpha-3	1	QLFVLAGSAEEGVMTSELAGVIK	QLFVLAGSAEEGVMTSELAGVIK	3	QLFVLAGSAEEGVMTSELAGVIK3	23943.8	28913.3	24175.2
M0R4M1	M0R4M1	M0R4M1_RAT	Nlrc5	NLR family, CARD domain containing 5	1	QLGACEESHPGPELHHGVK	QLGAC(UniMod:4)EESHPGPELHHGVK	4	QLGAC(UniMod:4)EESHPGPELHHGVK4	5228.35	926.573	1170.04
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	QLGASNFQDR	QLGASNFQDR	2	QLGASNFQDR2	228562	215172	226518
Q5BQE6	Q5BQE6	DHC24_RAT	Dhcr24	Delta(24)-sterol reductase	1	QLGCQDAFPEVYDK	QLGC(UniMod:4)QDAFPEVYDK	2	QLGC(UniMod:4)QDAFPEVYDK2	22660	26657.9	20797.4
Q9JHU5	Q9JHU5	ARFP1_RAT	Arfip1	Arfaptin-1	1	QLGDAFADLSLK	QLGDAFADLSLK	2	QLGDAFADLSLK2	13029.7	14704.8	8120.21
A0A8I6A5Y0	A0A8I6A5Y0	A0A8I6A5Y0_RAT	Vta1	Vesicle trafficking 1	1	QLGDNEAVTQEIVGCAHLENYALK	QLGDNEAVTQEIVGC(UniMod:4)AHLENYALK	3	QLGDNEAVTQEIVGC(UniMod:4)AHLENYALK3	15180.6	9349.11	15590.9
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	QLGESFSGIYCSLLPLGCWSADSQR	QLGESFSGIYC(UniMod:4)SLLPLGC(UniMod:4)WSADSQR	3	QLGESFSGIYC(UniMod:4)SLLPLGC(UniMod:4)WSADSQR3	4579.12	11203.6	9311.73
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QLGEVAAFGGSNIEPSVR	QLGEVAAFGGSNIEPSVR	2	QLGEVAAFGGSNIEPSVR2	61733.5	65294.6	63882.4
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QLGEVAAFGGSNIEPSVR	QLGEVAAFGGSNIEPSVR	3	QLGEVAAFGGSNIEPSVR3	60890.7	63024.5	53811
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	QLGFQETAYGEFLSR	QLGFQETAYGEFLSR	2	QLGFQETAYGEFLSR2	9655.96	11358.2	15697.9
D3Z898	D3Z898	D3Z898_RAT	Samhd1	Deoxynucleoside triphosphate triphosphohydrolase SAMHD1	1	QLGGGYYVFPGASHNR	QLGGGYYVFPGASHNR	3	QLGGGYYVFPGASHNR3	4355.85		
D3ZYF5	D3ZYF5	D3ZYF5_RAT	Trim58	Tripartite motif-containing 58	1	QLGLGTGHAGSR	QLGLGTGHAGSR	3	QLGLGTGHAGSR3	24481.4	19113.8	22761
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QLGLLLHDAIQIPR	QLGLLLHDAIQIPR	2	QLGLLLHDAIQIPR2	7369.34	4610.24	5012.55
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QLGLLLHDAIQIPR	QLGLLLHDAIQIPR	3	QLGLLLHDAIQIPR3	134611	131687	149173
A0A8I5ZMR4	A0A8I5ZMR4	A0A8I5ZMR4_RAT	Lsm7	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated	1	QLGLVVCR	QLGLVVC(UniMod:4)R	2	QLGLVVC(UniMod:4)R2	43708.1	24475.4	28837.9
D3ZCJ3	D3ZCJ3	D3ZCJ3_RAT	Mfsd6	Major facilitator superfamily domain containing 6	1	QLGMSPSQSGLLVGIR	QLGMSPSQSGLLVGIR	2	QLGMSPSQSGLLVGIR2	11499	3554.92	10941.9
Q66HG9	Q66HG9	MAVS_RAT	Mavs	Mitochondrial antiviral-signaling protein	1	QLGNQGTLWELFNTLQR	QLGNQGTLWELFNTLQR	3	QLGNQGTLWELFNTLQR3	22015.1	19134.7	20165.6
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	QLGNQMEASLLAVR	QLGNQMEASLLAVR	2	QLGNQMEASLLAVR2	98971.1	106061	83650.2
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	QLGNQMEASLLAVR	QLGNQMEASLLAVR	3	QLGNQMEASLLAVR3	19962.8	28647.1	17547.4
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	QLGPDNPNVAR	QLGPDNPNVAR	2	QLGPDNPNVAR2	37428.6	39241.3	39472.4
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	QLGPPVQQIILVSPMGVSK	QLGPPVQQIILVSPMGVSK	3	QLGPPVQQIILVSPMGVSK3	34403.5	27904.1	44538.6
B1H264	B1H264	B1H264_RAT	Tbc1d17	TBC1 domain family, member 17	1	QLGQLLLLLR	QLGQLLLLLR	2	QLGQLLLLLR2	1035.7		2674.31
M0RD40	M0RD40	M0RD40_RAT	Sik3	non-specific serine/threonine protein kinase	1	QLGQQSFR	QLGQQSFR	2	QLGQQSFR2	6726.32		4718.48
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	QLGRPTACLSFCQLHK	QLGRPTAC(UniMod:4)LSFC(UniMod:4)QLHK	4	QLGRPTAC(UniMod:4)LSFC(UniMod:4)QLHK4		3976.32	8830.62
P21533	P21533	RL6_RAT	Rpl6	Large ribosomal subunit protein eL6	1	QLGSGLLLVTGPLALNR	QLGSGLLLVTGPLALNR	2	QLGSGLLLVTGPLALNR2	11732.5	18315.3	16830.9
P21533	P21533	RL6_RAT	Rpl6	Large ribosomal subunit protein eL6	1	QLGSGLLLVTGPLALNR	QLGSGLLLVTGPLALNR	3	QLGSGLLLVTGPLALNR3	4424.31		3466.68
G3V7E6	G3V7E6	G3V7E6_RAT	Pcm1	Pericentriolar material 1	1	QLGSILQDSLAK	QLGSILQDSLAK	2	QLGSILQDSLAK2	4531.1	2559.26	5599.26
Q62840	Q62840	AMBN_RAT	Ambn	Ameloblastin	1	QLGSLQGLNALSQYSR	QLGSLQGLNALSQYSR	2	QLGSLQGLNALSQYSR2	3579.4	3801.36	8778.95
Q62703	Q62703	RCN2_RAT	Rcn2	Reticulocalbin-2	1	QLHDDYFYHDEL	QLHDDYFYHDEL	3	QLHDDYFYHDEL3	7849.46	3954.81	
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	QLHDEAR	QLHDEAR	1	QLHDEAR1			3560.48
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	QLHEAIVTLGLAK	QLHEAIVTLGLAK	3	QLHEAIVTLGLAK3	2061.07	2751.23	3213.01
A0A8I6ALF3	A0A8I6ALF3	A0A8I6ALF3_RAT	Fam117b	Family with sequence similarity 117, member B	1	QLHEIPAFYCPDK	QLHEIPAFYC(UniMod:4)PDK	3	QLHEIPAFYC(UniMod:4)PDK3	5836.88	4016.25	3741.19
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	QLHEQAMQFGQLLTHLDTTQQMMASSLK	QLHEQAMQFGQLLTHLDTTQQMMASSLK	4	QLHEQAMQFGQLLTHLDTTQQMMASSLK4	76437.9	79915.7	76519.4
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	QLHFYTEAAR	QLHFYTEAAR	3	QLHFYTEAAR3	37191.2	23005.2	30259.9
O35854	O35854	BCAT2_RAT	Bcat2	Branched-chain-amino-acid aminotransferase, mitochondrial	1	QLHIPTMENGPELILR	QLHIPTMENGPELILR	2	QLHIPTMENGPELILR2	26298.6	15847.1	19802.4
O35854	O35854	BCAT2_RAT	Bcat2	Branched-chain-amino-acid aminotransferase, mitochondrial	1	QLHIPTMENGPELILR	QLHIPTMENGPELILR	3	QLHIPTMENGPELILR3	55740	54390.5	63882.8
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	QLHLAEAQTK	QLHLAEAQTK	2	QLHLAEAQTK2	6037.41	9835.49	11076.5
P08650	P08650	CO5_RAT	C5	Complement C5	1	QLHLDMDINVSYK	QLHLDMDINVSYK	3	QLHLDMDINVSYK3	38535	25911	23054.7
D3Z9D0	D3Z9D0	D3Z9D0_RAT	RGD1306271	Similar to KIAA1549 protein	1	QLHNEVFPAEMER	QLHNEVFPAEMER	3	QLHNEVFPAEMER3	12070.9	19862.7	23901.3
A1L1K3	A1L1K3	APC5_RAT	Anapc5	Anaphase-promoting complex subunit 5	1	QLHQELPSHGVPLINHL	QLHQELPSHGVPLINHL	4	QLHQELPSHGVPLINHL4	4967.41	1216.96	4568.24
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	QLHQSCQTDDGEDDLK	QLHQSC(UniMod:4)QTDDGEDDLK	3	QLHQSC(UniMod:4)QTDDGEDDLK3	4219.77	2277.68	4197.3
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	QLHQSCQTDDGEDDLKK	QLHQSC(UniMod:4)QTDDGEDDLKK	3	QLHQSC(UniMod:4)QTDDGEDDLKK3	11256.6	16638.7	6363.22
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	QLHQSCQTDDGEDDLKK	QLHQSC(UniMod:4)QTDDGEDDLKK	4	QLHQSC(UniMod:4)QTDDGEDDLKK4	36427.2	34190	29103.1
P05545	A0A0G2JSK1;P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	0	QLHSLTLASINTDFTLSLYK	QLHSLTLASINTDFTLSLYK	3	QLHSLTLASINTDFTLSLYK3	261135	189787	139984
P05545	A0A0G2JSK1;P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	0	QLHSLTLASINTDFTLSLYKK	QLHSLTLASINTDFTLSLYKK	4	QLHSLTLASINTDFTLSLYKK4	31349	38032.4	43324.9
P05544	P05544	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	1	QLHSLTLASSNTDFALSLYK	QLHSLTLASSNTDFALSLYK	3	QLHSLTLASSNTDFALSLYK3	357529	328497	317907
P05544	P05544	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	1	QLHSLTLASSNTDFALSLYKK	QLHSLTLASSNTDFALSLYKK	3	QLHSLTLASSNTDFALSLYKK3	2416.97	4039.87	5296.4
P05544	P05544	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	1	QLHSLTLASSNTDFALSLYKK	QLHSLTLASSNTDFALSLYKK	4	QLHSLTLASSNTDFALSLYKK4	59326.1	58904.1	83359.5
Q68FV8	Q68FV8	UBTD1_RAT	Ubtd1	Ubiquitin domain-containing protein 1	1	QLHSQEGIEPSWQR	QLHSQEGIEPSWQR	3	QLHSQEGIEPSWQR3	34441.6	17892.5	22632.6
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	QLHTLQK	QLHTLQK	1	QLHTLQK1	1507.77	6346.79	
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	QLHTLQK	QLHTLQK	2	QLHTLQK2	6589.23	14544.2	13181.9
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	QLHVTLAYHFQASHLPTLEK	QLHVTLAYHFQASHLPTLEK	4	QLHVTLAYHFQASHLPTLEK4	24566.9	27172.5	20644.5
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	QLIALENK	QLIALENK	2	QLIALENK2	79745.7	85948.8	82226.9
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QLIAQVMLYSQGFR	QLIAQVMLYSQGFR	2	QLIAQVMLYSQGFR2	30594.7	45327.8	40264
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QLIAQVMLYSQGFR	QLIAQVMLYSQGFR	3	QLIAQVMLYSQGFR3	33581	38700.7	35129.2
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	QLIATDDAVPLGSGK	QLIATDDAVPLGSGK	2	QLIATDDAVPLGSGK2	7851.56	7546.7	12162.8
P50398	P50398	GDIA_RAT	Gdi1	Rab GDP dissociation inhibitor alpha	1	QLICDPSYIPDR	QLIC(UniMod:4)DPSYIPDR	2	QLIC(UniMod:4)DPSYIPDR2	96167.8	83272.1	91450.9
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	QLICDPSYVK	QLIC(UniMod:4)DPSYVK	2	QLIC(UniMod:4)DPSYVK2	36143	54513.9	48406.6
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	QLIDCIR	QLIDC(UniMod:4)IR	2	QLIDC(UniMod:4)IR2	31823.5	29633.4	25815.8
D4AE59	D4AE59	STK11_RAT	Stk11	Serine/threonine-protein kinase STK11	1	QLIDGLEYLHSQGIVHK	QLIDGLEYLHSQGIVHK	3	QLIDGLEYLHSQGIVHK3		8506.13	
D4AE59	D4AE59	STK11_RAT	Stk11	Serine/threonine-protein kinase STK11	1	QLIDGLEYLHSQGIVHK	QLIDGLEYLHSQGIVHK	4	QLIDGLEYLHSQGIVHK4		9498.66	13857.7
A0A8I6ACU2	A0A8I6ACU2	A0A8I6ACU2_RAT	Ubap2l	Ubiquitin associated protein 2-like	1	QLIDITGK	QLIDITGK	2	QLIDITGK2	11954.5	11024.3	9798.1
Q9R010	Q9R010	CIB1_RAT	Cib1	Calcium and integrin-binding protein 1	1	QLIDNILEESDIDR	QLIDNILEESDIDR	2	QLIDNILEESDIDR2	2543.69	4489.78	
Q9R010	Q9R010	CIB1_RAT	Cib1	Calcium and integrin-binding protein 1	1	QLIDNILEESDIDRDGTINLSEFQHVISR	QLIDNILEESDIDRDGTINLSEFQHVISR	4	QLIDNILEESDIDRDGTINLSEFQHVISR4	2988.03		6932.95
F7FLB2	F7FLB2	F7FLB2_RAT	Pgm2	phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	1	QLIDQGK	QLIDQGK	2	QLIDQGK2	12129.1	13667.8	15438.7
D3ZG58	D3ZG58	D3ZG58_RAT	Zwilch	Protein zwilch	1	QLIGLYTMAHNPNMTHLK	QLIGLYTMAHNPNMTHLK	4	QLIGLYTMAHNPNMTHLK4	1928.23	2873.23	5889.37
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	QLIGMDPVAVFR	QLIGMDPVAVFR	2	QLIGMDPVAVFR2	52963.4	75345.7	48854.5
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	QLILEGQHHVVVR	QLILEGQHHVVVR	3	QLILEGQHHVVVR3	4658.29	8691.23	5323.34
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	QLILEGQHHVVVR	QLILEGQHHVVVR	4	QLILEGQHHVVVR4		3619.74	5102.57
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	QLILPGNSGNFK	QLILPGNSGNFK	2	QLILPGNSGNFK2	144804	157828	139570
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	QLILVGDHCQLGPVVMCK	QLILVGDHC(UniMod:4)QLGPVVMC(UniMod:4)K	3	QLILVGDHC(UniMod:4)QLGPVVMC(UniMod:4)K3	12353.4	20340.5	12183
Q9JJP9	Q9JJP9;D4AA63	UBQL1_RAT	Ubqln1	Ubiquilin-1	0	QLIMANPQMQQLIQR	QLIMANPQMQQLIQR	3	QLIMANPQMQQLIQR3	3813.81	4214.43	7206.23
D4ACN8	D4ACN8	PLRKT_RAT	Plgrkt	Plasminogen receptor (KT)	1	QLIMQNEMR	QLIMQNEMR	2	QLIMQNEMR2	63165.5	80116.6	61251.2
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	QLINVDPIHSDLLLETYK	QLINVDPIHSDLLLETYK	3	QLINVDPIHSDLLLETYK3	41388	43337	35133.1
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	QLINVDPIHSDLLLETYKR	QLINVDPIHSDLLLETYKR	3	QLINVDPIHSDLLLETYKR3	8110.68	4931.47	3978.37
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	QLINVDPIHSDLLLETYKR	QLINVDPIHSDLLLETYKR	4	QLINVDPIHSDLLLETYKR4		2413.7	
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	QLIPALVNYSQGGDAQQVSQAIR	QLIPALVNYSQGGDAQQVSQAIR	3	QLIPALVNYSQGGDAQQVSQAIR3	3315.39	4589.7	
A0A0G2JXD9	A0A0G2JXD9	A0A0G2JXD9_RAT	Dop1b	DOP1 leucine zipper like protein B	1	QLIPFFR	QLIPFFR	2	QLIPFFR2	2987.46	5342.54	9980.73
P51111	P51111	HD_RAT	Htt	Huntingtin	1	QLIPVVSDYLLSNLK	QLIPVVSDYLLSNLK	2	QLIPVVSDYLLSNLK2		2340.8	16041.2
F7ETI3	F7ETI3	F7ETI3_RAT	Wdr41	WD repeat domain 41	1	QLISCSEDGAVR	QLISC(UniMod:4)SEDGAVR	2	QLISC(UniMod:4)SEDGAVR2	1314.27	3369.9	
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	QLISTHFAPGDFQGFALVNPQR	QLISTHFAPGDFQGFALVNPQR	3	QLISTHFAPGDFQGFALVNPQR3	84743.9	92577.5	86571.1
F1M784	F1M784	F1M784_RAT	Pik3ap1	Phosphoinositide-3-kinase adaptor protein 1	1	QLITLQEQVK	QLITLQEQVK	2	QLITLQEQVK2	11462.3	11278.7	8890.64
P58751	P58751	RELN_RAT	Reln	Reelin	1	QLITSFLDSSQSR	QLITSFLDSSQSR	2	QLITSFLDSSQSR2	156920	181925	181256
P58751	P58751	RELN_RAT	Reln	Reelin	1	QLITSFLDSSQSR	QLITSFLDSSQSR	3	QLITSFLDSSQSR3	17869.1	33488.5	15471.6
P62630	P62632;P62630;F1M6C2;M0R757;A0A8I6AQI9	EF1A1_RAT	Eef1a1	Elongation factor 1-alpha 1	0	QLIVGVNK	QLIVGVNK	2	QLIVGVNK2	165508	163918	148349
A0A0G2K1G4	A0A0G2K1G4	A0A0G2K1G4_RAT	Rspry1	Ring finger and SPRY domain containing 1	1	QLIWYNAR	QLIWYNAR	2	QLIWYNAR2	7823.48	10235.6	
Q9Z269	Q9Z269	VAPB_RAT	Vapb	Vesicle-associated membrane protein-associated protein B	1	QLKEEDGLR	QLKEEDGLR	2	QLKEEDGLR2	5602.63	4080.17	5542.66
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	QLLADLIDK	QLLADLIDK	2	QLLADLIDK2	5106.83	5526.61	5248.32
F7FLB2	F7FLB2	F7FLB2_RAT	Pgm2	phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	1	QLLAEGNKEELEK	QLLAEGNKEELEK	3	QLLAEGNKEELEK3	18836.4	20444.9	13205.3
A0A0G2K528	A0A0G2K528	A0A0G2K528_RAT	Stx16	Syntaxin 16	1	QLLAEQVSSHTTSSPLHSR	QLLAEQVSSHTTSSPLHSR	4	QLLAEQVSSHTTSSPLHSR4	1961.03	3013.01	3428.86
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	QLLAGGVAGAVSR	QLLAGGVAGAVSR	2	QLLAGGVAGAVSR2	214769	170548	212976
Q9JLS3	Q9JLS3	TAOK2_RAT	Taok2	Serine/threonine-protein kinase TAO2	1	QLLALESR	QLLALESR	2	QLLALESR2	12059	9347.86	7311.82
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	QLLAPGNSAGAFLIR	QLLAPGNSAGAFLIR	2	QLLAPGNSAGAFLIR2	367909	367815	396128
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	QLLAPGNSAGAFLIR	QLLAPGNSAGAFLIR	3	QLLAPGNSAGAFLIR3	54751.3	72042.6	61567.7
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	QLLAPVVK	QLLAPVVK	2	QLLAPVVK2	59948.7	62020.5	54864.8
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	QLLCGAAIGTHEDDKYR	QLLC(UniMod:4)GAAIGTHEDDKYR	3	QLLC(UniMod:4)GAAIGTHEDDKYR3	7810.26	12396	9094.98
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	QLLCGAAIGTHEDDKYR	QLLC(UniMod:4)GAAIGTHEDDKYR	4	QLLC(UniMod:4)GAAIGTHEDDKYR4	20203.9	24623.1	27619.4
D3ZLZ7	D3ZLZ7	IMDH1_RAT	Impdh1	Inosine-5'-monophosphate dehydrogenase 1	1	QLLCGAAVGTR	QLLC(UniMod:4)GAAVGTR	2	QLLC(UniMod:4)GAAVGTR2	12425.7	11764.8	8475.5
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	QLLDDEER	QLLDDEER	2	QLLDDEER2	276758	293758	326312
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	QLLDDEERITAETLYMSHR	QLLDDEERITAETLYMSHR	3	QLLDDEERITAETLYMSHR3	18835.1	13917.4	11654.8
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	QLLDDEERITAETLYMSHR	QLLDDEERITAETLYMSHR	4	QLLDDEERITAETLYMSHR4	67460.5	76441.7	76945.3
Q00972	Q00972	BCKD_RAT	Bckdk	[3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial	1	QLLDDHKDVVTLLAEGLR	QLLDDHKDVVTLLAEGLR	3	QLLDDHKDVVTLLAEGLR3	3951.17	3313.82	3301.01
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	QLLDFSQK	QLLDFSQK	2	QLLDFSQK2	33317	25438	25166.8
Q9ERE4	Q9ERE4	GOLP3_RAT	Golph3	Golgi phosphoprotein 3	1	QLLDLDPEVECLK	QLLDLDPEVEC(UniMod:4)LK	2	QLLDLDPEVEC(UniMod:4)LK2	15756.8	11773.7	8815.46
Q9ES71	Q9ES71	GNPAT_RAT	Gnpat	Dihydroxyacetone phosphate acyltransferase	1	QLLDQDASQCYDALSSELQK	QLLDQDASQC(UniMod:4)YDALSSELQK	3	QLLDQDASQC(UniMod:4)YDALSSELQK3	1494.62		2312.7
G3V6N2	G3V6N2	G3V6N2_RAT	Tmed4	Transmembrane p24 trafficking protein 4	1	QLLDQVEQIQK	QLLDQVEQIQK	2	QLLDQVEQIQK2	24119.6	22578	22326.5
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	QLLDSEGFLEDK	QLLDSEGFLEDK	2	QLLDSEGFLEDK2	7496.18	13572	8974.69
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	QLLDSGLPSLLVR	QLLDSGLPSLLVR	2	QLLDSGLPSLLVR2	24672.5	27689	21433.7
G3V783	G3V783	G3V783_RAT	Ripk2	Receptor-interacting serine/threonine-protein kinase 2	1	QLLDTSDIQGEEFAR	QLLDTSDIQGEEFAR	2	QLLDTSDIQGEEFAR2		1519.74	2628.97
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	QLLEAENEKDSDTLKDIR	QLLEAENEKDSDTLKDIR	3	QLLEAENEKDSDTLKDIR3	1279.94		3948.72
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	QLLEAENEKDSDTLKDIR	QLLEAENEKDSDTLKDIR	4	QLLEAENEKDSDTLKDIR4	2749.28	5778.55	4670.77
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	QLLEAQLQQNK	QLLEAQLQQNK	2	QLLEAQLQQNK2	14931.4	14797.7	14212.7
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	QLLEEFAWLER	QLLEEFAWLER	2	QLLEEFAWLER2	46414.2	44934.3	39552
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	QLLEENEEK	QLLEENEEK	2	QLLEENEEK2	23867.7	19838.9	18910.5
A0A8I6ANF5	A0A8I6ANF5	A0A8I6ANF5_RAT	Dffa	DNA fragmentation factor subunit alpha	1	QLLELYLQALEK	QLLELYLQALEK	2	QLLELYLQALEK2	14420.6	11172.2	7841.72
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	QLLEQEAK	QLLEQEAK	2	QLLEQEAK2	134576	154697	153184
Q8CHM7	Q8CHM7	HACL1_RAT	Hacl1	2-hydroxyacyl-CoA lyase 1	1	QLLEQFVK	QLLEQFVK	2	QLLEQFVK2	9733.71	10405.9	8924.69
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QLLEQPDSDSR	QLLEQPDSDSR	2	QLLEQPDSDSR2	86882.3	99211.2	102669
A0A8I6G9F8	A0A8I6G9F8	A0A8I6G9F8_RAT	Wdr59	WD repeat domain 59	1	QLLESLLAHYCR	QLLESLLAHYC(UniMod:4)R	3	QLLESLLAHYC(UniMod:4)R3	3758.68	2999.33	
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	QLLEVVLAFGNYMNK	QLLEVVLAFGNYMNK	2	QLLEVVLAFGNYMNK2	14405.1		8127.09
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	QLLEVVLAFGNYMNK	QLLEVVLAFGNYMNK	3	QLLEVVLAFGNYMNK3	2991.8	3658.06	4642.87
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	QLLFFYK	QLLFFYK	2	QLLFFYK2	11546.5	12186.9	11937.6
F7FNG5	D3ZK73;F7FNG5	F7FNG5_RAT	Cul4a	Cullin 4A	0	QLLGEHLTAILQK	QLLGEHLTAILQK	3	QLLGEHLTAILQK3	13647.6	13060.8	18320.8
D3ZGJ0	D3ZGJ0	D3ZGJ0_RAT	Dhx32	DEAH-box helicase 32 (putative)	1	QLLGSSPSGK	QLLGSSPSGK	2	QLLGSSPSGK2	9222.02	9998.68	15354.7
F7ELS2	F7ELS2	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	1	QLLHSCTVIATNILLVDEIMR	QLLHSC(UniMod:4)TVIATNILLVDEIMR	3	QLLHSC(UniMod:4)TVIATNILLVDEIMR3	17041	13115.5	13393.1
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	QLLIGLLK	QLLIGLLK	2	QLLIGLLK2	11682.6	18756.5	9862.19
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	QLLIQQK	QLLIQQK	2	QLLIQQK2	31614.2	19987.4	23450.4
P34978	P34978	TA2R_RAT	Tbxa2r	Thromboxane A2 receptor	1	QLLIYLR	QLLIYLR	2	QLLIYLR2	9864.4	7816.14	8715.18
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	QLLLDILQPQQSGR	QLLLDILQPQQSGR	2	QLLLDILQPQQSGR2	22874.7	13218	19362.6
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	QLLLDILQPQQSGR	QLLLDILQPQQSGR	3	QLLLDILQPQQSGR3		4996.05	7963.04
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	QLLLDSQSQLEEAK	QLLLDSQSQLEEAK	2	QLLLDSQSQLEEAK2	45241.8	29040	28597.2
A0A8I6ANL9	A0A8I6ANL9	A0A8I6ANL9_RAT	Cdc23	Cell division cycle 23	1	QLLLIAGLTR	QLLLIAGLTR	2	QLLLIAGLTR2	17075	11216.6	15371
Q8VHI8	Q8VHI8	SEC20_RAT	Bnip1	Vesicle transport protein SEC20	1	QLLLQEVENHK	QLLLQEVENHK	3	QLLLQEVENHK3	6484.18	1581.75	4396.3
Q99M64	Q99M64	P4K2A_RAT	Pi4k2a	Phosphatidylinositol 4-kinase type 2-alpha	1	QLLLQFER	QLLLQFER	2	QLLLQFER2	6942.95	2520.17	4710.83
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	QLLLQTQLMDQLQHEEVQGK	QLLLQTQLMDQLQHEEVQGK	3	QLLLQTQLMDQLQHEEVQGK3	43898.1	55229.4	45509.4
Q5XI55	Q5XI55	NGLY1_RAT	Ngly1	Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase	1	QLLLSESR	QLLLSESR	2	QLLLSESR2	7835.63	7073.93	6343.96
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	QLLLSFK	QLLLSFK	2	QLLLSFK2	7453.19	4810.49	4356.68
P05065	Q6AY07;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	QLLLTADDR	QLLLTADDR	2	QLLLTADDR2	432972	347865	357417
P05065	P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	1	QLLLTADDRVNPCIGGVILFHETLYQK	QLLLTADDRVNPC(UniMod:4)IGGVILFHETLYQK	4	QLLLTADDRVNPC(UniMod:4)IGGVILFHETLYQK4	17902.3	22215.4	21379.6
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	QLLLTPSAVVIVEDAK	QLLLTPSAVVIVEDAK	2	QLLLTPSAVVIVEDAK2	29797.2	66258.9	43533.8
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	QLLLTPSAVVIVEDAK	QLLLTPSAVVIVEDAK	3	QLLLTPSAVVIVEDAK3	8068.29	24300.1	10370
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	QLLLYLTSK	QLLLYLTSK	2	QLLLYLTSK2	5385.19	5129.7	5801.33
P62744	P62744	AP2S1_RAT	Ap2s1	AP-2 complex subunit sigma	1	QLLMLQSLE	QLLMLQSLE	2	QLLMLQSLE2	3619.76		3436.52
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	QLLNCLHVITMYNR	QLLNC(UniMod:4)LHVITMYNR	3	QLLNC(UniMod:4)LHVITMYNR3	13313.2	4086.86	10642.9
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	QLLNLVVIGHVDAGK	QLLNLVVIGHVDAGK	3	QLLNLVVIGHVDAGK3		2334.58	2480.89
B1WC26	B1WC26	B1WC26_RAT	Nans	N-acetylneuraminate synthase	1	QLLPCEMACNEK	QLLPC(UniMod:4)EMAC(UniMod:4)NEK	2	QLLPC(UniMod:4)EMAC(UniMod:4)NEK2	23426.6	22965.2	22475
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	QLLPDGSLFISNVVHSK	QLLPDGSLFISNVVHSK	2	QLLPDGSLFISNVVHSK2	15760.7	12805.2	16954.5
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	QLLPDGSLFISNVVHSK	QLLPDGSLFISNVVHSK	3	QLLPDGSLFISNVVHSK3	76686.1	77795.5	82077.8
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	QLLQAALR	QLLQAALR	2	QLLQAALR2	54884.6	53479.1	53407.6
Q62812	F1LNF0;Q63862;Q62812	MYH9_RAT	Myh9	Myosin-9	0	QLLQANPILEAFGNAK	QLLQANPILEAFGNAK	2	QLLQANPILEAFGNAK2	7.84888e+06	9.26782e+06	1.04799e+07
Q62812	F1LNF0;Q63862;Q62812	MYH9_RAT	Myh9	Myosin-9	0	QLLQANPILEAFGNAK	QLLQANPILEAFGNAK	3	QLLQANPILEAFGNAK3	646324	617664	800481
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	QLLQEAEIMK	QLLQEAEIMK	2	QLLQEAEIMK2	9456.49	2479.2	4470.23
F1M8P2	F1M8P2	F1M8P2_RAT	Zyg11b	Zyg-11 family member B, cell cycle regulator	1	QLLQIVK	QLLQIVK	2	QLLQIVK2	973.03	2160.48	
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	QLLQLLTTYIVR	QLLQLLTTYIVR	2	QLLQLLTTYIVR2		6664.17	5039.88
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	QLLQQTNEILK	QLLQQTNEILK	2	QLLQQTNEILK2	145425	119160	143242
D3ZPA1	D3ZPA1	D3ZPA1_RAT	Gcc1	GRIP and coiled-coil domain containing 1	1	QLLQYQAR	QLLQYQAR	2	QLLQYQAR2		8194.24	
Q6AY04	Q6AY04	MAIP1_RAT	Maip1	m-AAA protease-interacting protein 1, mitochondrial	1	QLLSASYEFQR	QLLSASYEFQR	2	QLLSASYEFQR2	2415.88	2097.01	
Q925Q9	Q925Q9	SH3K1_RAT	Sh3kbp1	SH3 domain-containing kinase-binding protein 1	1	QLLSELDEEK	QLLSELDEEK	2	QLLSELDEEK2	4657.63	7989.42	5495.8
Q925Q9	Q925Q9	SH3K1_RAT	Sh3kbp1	SH3 domain-containing kinase-binding protein 1	1	QLLSELDEEKK	QLLSELDEEKK	3	QLLSELDEEKK3	9615.43	9206.45	12289
D3ZKE1	D3ZKE1	D3ZKE1_RAT	Uvrag	UV radiation resistance associated	1	QLLSELSYIYPIDLNEHK	QLLSELSYIYPIDLNEHK	3	QLLSELSYIYPIDLNEHK3	7267.71	10035.6	8661.02
Q62844	Q62844	FYN_RAT	Fyn	Tyrosine-protein kinase Fyn	1	QLLSFGNPR	QLLSFGNPR	2	QLLSFGNPR2	59419.2	67706	40006.4
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	QLLSQIGNAMGYIR	QLLSQIGNAMGYIR	2	QLLSQIGNAMGYIR2	17711.7	12563.8	19907.9
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	QLLTDFCTHLPNLPDSTAK	QLLTDFC(UniMod:4)THLPNLPDSTAK	3	QLLTDFC(UniMod:4)THLPNLPDSTAK3	38596.7	33878.2	40901.9
Q5QJC9	Q5QJC9	BAG5_RAT	Bag5	BAG family molecular chaperone regulator 5	1	QLLTLDAVDPLGEEK	QLLTLDAVDPLGEEK	2	QLLTLDAVDPLGEEK2	7190.62	6630.6	4384.13
P31977	P31977	EZRI_RAT	Ezr	Ezrin	1	QLLTLSNELSQAR	QLLTLSNELSQAR	2	QLLTLSNELSQAR2	5644.29	9265.98	5074.5
Q4KLG1	Q4KLG1	Q4KLG1_RAT	Mospd3	Motile sperm domain containing 3	1	QLLTLYNPTGTALR	QLLTLYNPTGTALR	2	QLLTLYNPTGTALR2	9162.84	3979.31	6392.88
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	QLLTYIR	QLLTYIR	2	QLLTYIR2	71024.1	90825	85834.9
Q5U2Y0	Q5U2Y0	WIPI4_RAT	Wdr45	WD repeat domain phosphoinositide-interacting protein 4	1	QLLVFPGHK	QLLVFPGHK	2	QLLVFPGHK2		1265.81	1428.77
A0A0G2JUF2	A0A0G2JUF2	A0A0G2JUF2_RAT	Snx30	Sorting nexin family member 30	1	QLLVGLADK	QLLVGLADK	2	QLLVGLADK2	9238.78	13240.6	5210.61
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	QLLVQQLGLTEK	QLLVQQLGLTEK	2	QLLVQQLGLTEK2	73361.1	95074.4	89093.9
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	QLLYDAIK	QLLYDAIK	1	QLLYDAIK1		3440.99	
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	QLLYDAIK	QLLYDAIK	2	QLLYDAIK2	101345	113943	108321
Q8VII0	Q8VII0	FRMD6_RAT	Frmd6	FERM domain-containing protein 6 (Fragment)	1	QLLYDFPWTNVGK	QLLYDFPWTNVGK	2	QLLYDFPWTNVGK2	6425.23	9465.48	11590.8
Q6P9X4	A0A8I5Y1B8;Q78EG7;Q6P9X4	TP4A2_RAT	Ptp4a2	Protein tyrosine phosphatase type IVA 2	0	QLLYLEK	QLLYLEK	2	QLLYLEK2	9498.55	9772.82	16194.5
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	QLMAEKPQFTDVVSER	QLMAEKPQFTDVVSER	2	QLMAEKPQFTDVVSER2	4883.26	4054.54	
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	QLMAEKPQFTDVVSER	QLMAEKPQFTDVVSER	3	QLMAEKPQFTDVVSER3	74708.9	79057	70589.9
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	QLMCLLTR	QLMC(UniMod:4)LLTR	2	QLMC(UniMod:4)LLTR2	35874.8	41522.2	35026.7
Q4V897	Q4V897	CC90B_RAT	Ccdc90b	Coiled-coil domain-containing protein 90B, mitochondrial	1	QLMEATNEFTK	QLMEATNEFTK	2	QLMEATNEFTK2	7394.19	9801.9	5310.2
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	QLMEGSTK	QLMEGSTK	2	QLMEGSTK2	42632.6	35900.3	37163.9
A0A8I6AAA9	A0A8I6AAA9	A0A8I6AAA9_RAT	Lrch1	Leucine rich repeats and calponin homology domain containing 1	1	QLMELDVSCNEITALPQQIGQLK	QLMELDVSC(UniMod:4)NEITALPQQIGQLK	3	QLMELDVSC(UniMod:4)NEITALPQQIGQLK3	8531.35	7882.77	10403.9
Q68FS4	A0A8I6B0E2;Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	0	QLMESPANEMTPTR	QLMESPANEMTPTR	2	QLMESPANEMTPTR2	30350.1	39228.2	26933.9
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	QLMEVFK	QLMEVFK	1	QLMEVFK1	4694.13	2650.77	4965.08
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	QLMEVFK	QLMEVFK	2	QLMEVFK2	655776	597974	613226
A0A0G2JYI7	A0A0G2JYI7	A0A0G2JYI7_RAT	Ubap2	Ubiquitin-associated protein 2	1	QLMEVTGK	QLMEVTGK	2	QLMEVTGK2	8569.83	8914.67	9680.09
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	QLMHSGHPSEK	QLMHSGHPSEK	2	QLMHSGHPSEK2			33199.6
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	QLMLHYEFLQR	QLMLHYEFLQR	2	QLMLHYEFLQR2	17823.1	18688.3	14702.4
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	QLMLHYEFLQR	QLMLHYEFLQR	3	QLMLHYEFLQR3	226807	239894	206006
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	QLMQDKDHLSQK	QLMQDKDHLSQK	2	QLMQDKDHLSQK2	3598.27	2705.13	
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	QLMQDKDHLSQK	QLMQDKDHLSQK	3	QLMQDKDHLSQK3	25071.9	28865.3	29610.6
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	QLMVPAR	QLMVPAR	2	QLMVPAR2	693456	758216	641481
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	QLNEDCSK	QLNEDC(UniMod:4)SK	2	QLNEDC(UniMod:4)SK2			2725.06
P62716	P62716	PP2AB_RAT	Ppp2cb	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	1	QLNENQVR	QLNENQVR	2	QLNENQVR2	31164.5	18614.8	22512.9
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	QLNFLAK	QLNFLAK	1	QLNFLAK1	9968.08	7498.81	7375.22
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	QLNFLAK	QLNFLAK	2	QLNFLAK2	363056	379593	359572
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	QLNFVFTGR	QLNFVFTGR	2	QLNFVFTGR2	150423	157457	165803
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	QLNLAGVR	QLNLAGVR	2	QLNLAGVR2	189785	205044	197467
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	QLNLNLLDNWDTLGSTVGR	QLNLNLLDNWDTLGSTVGR	3	QLNLNLLDNWDTLGSTVGR3	17852.9	15897.4	2.35524e+06
Q498T9	Q498T9	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	1	QLNLNNEWTPDK	QLNLNNEWTPDK	2	QLNLNNEWTPDK2	3518.05	3430.71	4327.56
Q498T9	Q498T9	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	1	QLNLNNEWTPDKLR	QLNLNNEWTPDKLR	3	QLNLNNEWTPDKLR3	9892.55	5690.53	5255.75
P37285	Q5PQM2;Q68G30;P37285	KLC1_RAT	Klc1	Kinesin light chain 1	0	QLNNLALLCQNQGK	QLNNLALLC(UniMod:4)QNQGK	2	QLNNLALLC(UniMod:4)QNQGK2	78105	68959.6	69484
P37285	Q5PQM2;Q68G30;P37285	KLC1_RAT	Klc1	Kinesin light chain 1	0	QLNNLALLCQNQGK	QLNNLALLC(UniMod:4)QNQGK	3	QLNNLALLC(UniMod:4)QNQGK3	22007.9	21158.7	25101.3
Q5FVL8	Q5FVL8	Q5FVL8_RAT	Abcb10	ATP binding cassette subfamily B member 10	1	QLNPVWLR	QLNPVWLR	2	QLNPVWLR2	14681.3	16340.2	18511.4
A0A8I6A538	A0A8I6A538	A0A8I6A538_RAT	Nin	Ninein	1	QLNQSCTVKPIEQEK	QLNQSC(UniMod:4)TVKPIEQEK	3	QLNQSC(UniMod:4)TVKPIEQEK3	8334.42		7602.87
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	QLNTALPQEFAALTK	QLNTALPQEFAALTK	2	QLNTALPQEFAALTK2	47842	57453.8	49842.4
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	QLNTITLPDFSDPETGSVHATSVAASR	QLNTITLPDFSDPETGSVHATSVAASR	3	QLNTITLPDFSDPETGSVHATSVAASR3	28676.3	30727.7	41630.2
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	QLNVNAK	QLNVNAK	2	QLNVNAK2	145065	168433	117665
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	QLNVNAKPFVPNVHAAEFVPSFLR	QLNVNAKPFVPNVHAAEFVPSFLR	4	QLNVNAKPFVPNVHAAEFVPSFLR4	28997.8	45009.6	34262.8
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	QLNYQHSDGSYSTFGDR	QLNYQHSDGSYSTFGDR	3	QLNYQHSDGSYSTFGDR3	123106	114527	86538
Q6AYI5	Q6AYI5	SHOC2_RAT	Shoc2	Leucine-rich repeat protein SHOC-2	1	QLPAEIGELCNLITLDVAHNQLEHLPK	QLPAEIGELC(UniMod:4)NLITLDVAHNQLEHLPK	4	QLPAEIGELC(UniMod:4)NLITLDVAHNQLEHLPK4	3383.29	6152.32	5279.5
Q2LAP6	B0BMX0;Q2LAP6	TES_RAT	Tes	Testin	0	QLPAHDQDPSK	QLPAHDQDPSK	2	QLPAHDQDPSK2	24237.2		29100.3
Q2LAP6	B0BMX0;Q2LAP6	TES_RAT	Tes	Testin	0	QLPAHDQDPSK	QLPAHDQDPSK	3	QLPAHDQDPSK3	77783.8		84438.5
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	QLPAMMALQTLHLR	QLPAMMALQTLHLR	2	QLPAMMALQTLHLR2	1292.86	2292.28	7213.94
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	QLPAMMALQTLHLR	QLPAMMALQTLHLR	3	QLPAMMALQTLHLR3	337320	419899	440852
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	QLPDIHLLAQR	QLPDIHLLAQR	2	QLPDIHLLAQR2	62452.2	66119.4	54188.3
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	QLPDIHLLAQR	QLPDIHLLAQR	3	QLPDIHLLAQR3	911073	765023	848463
Q8CHI9	Q8CHI9	CHSTF_RAT	Chst15	Carbohydrate sulfotransferase 15	1	QLPDLQDLK	QLPDLQDLK	2	QLPDLQDLK2	21507.4	50715.1	23293.8
Q8CHI9	Q8CHI9	CHSTF_RAT	Chst15	Carbohydrate sulfotransferase 15	1	QLPDLQDLKR	QLPDLQDLKR	3	QLPDLQDLKR3	9801.73	7947.7	7210.25
D3ZWZ9	D3ZWZ9	GP107_RAT	Gpr107	Protein GPR107	1	QLPEIVFSK	QLPEIVFSK	2	QLPEIVFSK2	35379.3	33590	39571.5
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	QLPELNPK	QLPELNPK	2	QLPELNPK2	39824.8	40812.3	39098.5
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	QLPEPLISFR	QLPEPLISFR	2	QLPEPLISFR2	812895	992830	936445
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	QLPFQLK	QLPFQLK	2	QLPFQLK2	25333.1	23320.5	24589.8
Q5U211	Q5U211	SNX3_RAT	Snx3	Sorting nexin-3	1	QLPFRGDDGIFDDNFIEER	QLPFRGDDGIFDDNFIEER	3	QLPFRGDDGIFDDNFIEER3	6797.47	5023.78	8964.2
D3ZZ46	D3ZZ46	D3ZZ46_RAT	Cln6	CLN6, transmembrane ER protein	1	QLPGAAGGPGVAFLQAR	QLPGAAGGPGVAFLQAR	2	QLPGAAGGPGVAFLQAR2	24562.5	33691.9	36078.6
D3ZZ46	D3ZZ46	D3ZZ46_RAT	Cln6	CLN6, transmembrane ER protein	1	QLPGAAGGPGVAFLQAR	QLPGAAGGPGVAFLQAR	3	QLPGAAGGPGVAFLQAR3	13170.3	15017.6	4317.25
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	QLPLTPAPTNEER	QLPLTPAPTNEER	2	QLPLTPAPTNEER2	433420	401050	392367
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	QLPLTPAPTNEER	QLPLTPAPTNEER	3	QLPLTPAPTNEER3	7301.25	6635.22	7478.2
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	QLPLVKPYLR	QLPLVKPYLR	2	QLPLVKPYLR2	181530	128452	156591
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	QLPLVKPYLR	QLPLVKPYLR	3	QLPLVKPYLR3	89345.8	112189	111632
A0A8I6G3S1	A0A8I6G3S1	A0A8I6G3S1_RAT	Mon1b	Vacuolar fusion protein MON1 homolog	1	QLPQFTSPELEAPYSR	QLPQFTSPELEAPYSR	2	QLPQFTSPELEAPYSR2	1358.49		2181.52
A0A8I6G3S1	A0A8I6G3S1	A0A8I6G3S1_RAT	Mon1b	Vacuolar fusion protein MON1 homolog	1	QLPQFTSPELEAPYSR	QLPQFTSPELEAPYSR	3	QLPQFTSPELEAPYSR3	3137.33	4217.97	6079.44
A0A0G2QC02	A0A0G2QC02	A0A0G2QC02_RAT	Skic2	Ski2 like RNA helicase	1	QLPQVLHMSELLR	QLPQVLHMSELLR	3	QLPQVLHMSELLR3	4429.09	3371.35	
Q5XIK2	Q5XIK2	TMX2_RAT	Tmx2	Thioredoxin-related transmembrane protein 2	1	QLPTLILFQGGK	QLPTLILFQGGK	2	QLPTLILFQGGK2	22385.7	25325.3	35827
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	QLQACSLVPGFIDIFSESK	QLQAC(UniMod:4)SLVPGFIDIFSESK	3	QLQAC(UniMod:4)SLVPGFIDIFSESK3	2603.26		2016.87
Q641X8	Q641X8;A0A0G2K273	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	0	QLQAETEPIVK	QLQAETEPIVK	2	QLQAETEPIVK2	58426.7	77021.4	80629.8
B2RYF7	B2RYF7	WASH1_RAT	Washc1	WASH complex subunit 1	1	QLQAIGER	QLQAIGER	2	QLQAIGER2	24991.1	21964.6	24137.8
Q5PQK5	Q5PQK5	Q5PQK5_RAT	Rdx	Radixin	1	QLQALSSELAQAR	QLQALSSELAQAR	2	QLQALSSELAQAR2		3400.57	4405.6
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	QLQALTR	QLQALTR	2	QLQALTR2	1.57569e+06	1.39284e+06	1.24865e+06
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	QLQDELEMLVER	QLQDELEMLVER	2	QLQDELEMLVER2	61009	55119.3	61611
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	QLQDELEMLVER	QLQDELEMLVER	3	QLQDELEMLVER3	15895.8	20494.4	15992.7
D3ZL11	D3ZL11	D3ZL11_RAT	Rbsn	Rabenosyn, RAB effector	1	QLQDEYDQQQTEK	QLQDEYDQQQTEK	2	QLQDEYDQQQTEK2	1029.49	524.719	2068.72
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	QLQDIATLADQR	QLQDIATLADQR	2	QLQDIATLADQR2	57440.1	62540.3	34001.4
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	QLQDIATLADQR	QLQDIATLADQR	3	QLQDIATLADQR3	6883.14	13557.8	12207.3
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	QLQDIATLADQRR	QLQDIATLADQRR	3	QLQDIATLADQRR3	30215	31126	23445.8
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	QLQDPEHVASFEK	QLQDPEHVASFEK	3	QLQDPEHVASFEK3	113632	70382.1	72950.3
A0A8I5ZYW3	A0A8I5ZYW3	A0A8I5ZYW3_RAT	Lsp1	Lymphocyte-specific protein 1	1	QLQDQDKDEEDEGGHFLEQPGQQALVSLK	QLQDQDKDEEDEGGHFLEQPGQQALVSLK	4	QLQDQDKDEEDEGGHFLEQPGQQALVSLK4	27683.3	31225.5	34203
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	QLQDTPWTSGPTR	QLQDTPWTSGPTR	2	QLQDTPWTSGPTR2	14326.6	16303.8	25786.7
D3ZV26	D3ZV26	D3ZV26_RAT	Sft2d3	Vesicle transport protein	1	QLQDYLMQGK	QLQDYLMQGK	2	QLQDYLMQGK2	4005.38	5545.97	2290.16
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QLQEAHR	QLQEAHR	2	QLQEAHR2			29618.8
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	QLQEDAAR	QLQEDAAR	2	QLQEDAAR2	620946	263140	300022
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	QLQEEAEQCR	QLQEEAEQC(UniMod:4)R	2	QLQEEAEQC(UniMod:4)R2	143454	89570.3	84167.7
A0A0G2K059	A0A0G2K059	A0A0G2K059_RAT	Mcu	Calcium uniporter protein	1	QLQEEDR	QLQEEDR	2	QLQEEDR2			17198.6
A0A0G2K059	A0A0G2K059	A0A0G2K059_RAT	Mcu	Calcium uniporter protein	1	QLQEEDRGIDR	QLQEEDRGIDR	3	QLQEEDRGIDR3	74949.5	95512.7	85532.3
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QLQEELAEHQVPVEK	QLQEELAEHQVPVEK	2	QLQEELAEHQVPVEK2	5927.95		6702.35
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QLQEELAEHQVPVEK	QLQEELAEHQVPVEK	3	QLQEELAEHQVPVEK3	35049.2	61133	40828.3
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	QLQEHVQQLNR	QLQEHVQQLNR	2	QLQEHVQQLNR2	13700.2	10297.4	9064.48
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	QLQEHVQQLNR	QLQEHVQQLNR	3	QLQEHVQQLNR3	122209	109062	133359
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	QLQEIAAAR	QLQEIAAAR	2	QLQEIAAAR2	38798.5	40629.9	31114.4
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	QLQELNVAYNGAGDTVALALAK	QLQELNVAYNGAGDTVALALAK	3	QLQELNVAYNGAGDTVALALAK3	18335.5	22505.7	18511.4
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	QLQEMDER	QLQEMDER	2	QLQEMDER2	85571.3	59337.2	81455.5
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	QLQEMDERR	QLQEMDERR	3	QLQEMDERR3	71332	110747	147449
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	QLQEQHYQQYMQQLYQVQLAQQQAALQK	QLQEQHYQQYMQQLYQVQLAQQQAALQK	4	QLQEQHYQQYMQQLYQVQLAQQQAALQK4	7103.1	8880.87	8447.54
A0A0G2K1A4	A0A0G2K1A4	A0A0G2K1A4_RAT	Evi5l	Ecotropic viral integration site 5-like	1	QLQEQQENPR	QLQEQQENPR	2	QLQEQQENPR2	7070.25	6316.84	4119.29
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	QLQESATK	QLQESATK	2	QLQESATK2			18282
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	QLQESCSVCLAGLDGFR	QLQESC(UniMod:4)SVC(UniMod:4)LAGLDGFR	2	QLQESC(UniMod:4)SVC(UniMod:4)LAGLDGFR2	16130.2	10314.8	8355.24
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	QLQESCSVCLAGLDGFR	QLQESC(UniMod:4)SVC(UniMod:4)LAGLDGFR	3	QLQESC(UniMod:4)SVC(UniMod:4)LAGLDGFR3	18493	20401.1	19442.8
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	QLQESLAHLSSVEEELAEAR	QLQESLAHLSSVEEELAEAR	3	QLQESLAHLSSVEEELAEAR3	91899.8	84166.5	91057.7
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	QLQFMDK	QLQFMDK	2	QLQFMDK2	37789.8	45881.4	83555.1
O35217	O35217	MINP1_RAT	Minpp1	Multiple inositol polyphosphate phosphatase 1	1	QLQGLLQTR	QLQGLLQTR	2	QLQGLLQTR2	60932.1	51281.2	55205.1
F1LT49	F1LT49	F1LT49_RAT	Lrrc47	Leucine rich repeat containing 47	1	QLQLEAEEQRK	QLQLEAEEQRK	3	QLQLEAEEQRK3	5787.13	4209.08	10531.7
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	QLQLQIDK	QLQLQIDK	2	QLQLQIDK2	2.07183e+07	2.50072e+07	2.3611e+07
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	QLQLQIDKAK	QLQLQIDKAK	2	QLQLQIDKAK2	4864.36	6181.49	4865.91
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	QLQLQIDKAK	QLQLQIDKAK	3	QLQLQIDKAK3	51859.3	69277.5	58482.9
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	QLQLYEIHGAQK	QLQLYEIHGAQK	2	QLQLYEIHGAQK2	10778.2	7356.17	8648.8
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	QLQLYEIHGAQK	QLQLYEIHGAQK	3	QLQLYEIHGAQK3	131485	124242	132062
Q5RJR2	Q5RJR2;A0A8I6GGS8	TWF1_RAT	Twf1	Twinfilin-1	0	QLQMDVIR	QLQMDVIR	2	QLQMDVIR2	136105	92886.2	111980
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	QLQNIIQATSR	QLQNIIQATSR	2	QLQNIIQATSR2	30933.7	23471.1	28351.4
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QLQNISQAAAAGGAK	QLQNISQAAAAGGAK	2	QLQNISQAAAAGGAK2	28119.4	35700.5	29379.3
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QLQNISQAAAAGGAK	QLQNISQAAAAGGAK	3	QLQNISQAAAAGGAK3	6320.43	19809.5	13129.8
Q6TEK3	Q6TEK3	VKORL_RAT	Vkorc1l1	Vitamin K epoxide reductase complex subunit 1-like protein 1	1	QLQPKED	QLQPKED	2	QLQPKED2	43381.5	38865.1	39687.4
A0A8I6A502	A0A8I6A502	A0A8I6A502_RAT	Tns3	Tensin 3	1	QLQPLSR	QLQPLSR	2	QLQPLSR2	17184.4	18327.4	16660.9
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	QLQQELEEVSTR	QLQQELEEVSTR	2	QLQQELEEVSTR2	132234	111141	99259.4
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	QLQQELEEVSTR	QLQQELEEVSTR	3	QLQQELEEVSTR3	52615.7	61599.6	85222.3
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	QLQQELQEYQNK	QLQQELQEYQNK	2	QLQQELQEYQNK2	5481.53	4364.18	2151.64
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	QLQQEQAYLLSLQHDHR	QLQQEQAYLLSLQHDHR	4	QLQQEQAYLLSLQHDHR4	16469.1	15534.5	11350.4
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QLQQLSGWLTLTEER	QLQQLSGWLTLTEER	2	QLQQLSGWLTLTEER2	50486.3	49045.5	61072
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QLQQLSGWLTLTEER	QLQQLSGWLTLTEER	3	QLQQLSGWLTLTEER3	12379.2	16512.5	15750.6
O88994	O88994	MARC2_RAT	Mtarc2	Mitochondrial amidoxime reducing component 2	1	QLQQVGTVSK	QLQQVGTVSK	2	QLQQVGTVSK2	23229.8	23491.9	24060.6
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	QLQQVPGLLHR	QLQQVPGLLHR	3	QLQQVPGLLHR3	23781.2	25129.4	15390.9
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	QLQSDLQQK	QLQSDLQQK	2	QLQSDLQQK2	38465.4	45992.6	30577.2
A0A8I5ZQ24	A0A8I5ZQ24	A0A8I5ZQ24_RAT	Atp6v1h	V-type proton ATPase subunit H	1	QLQSEQPQTAAAR	QLQSEQPQTAAAR	2	QLQSEQPQTAAAR2	1129.91	5904.6	3781.9
O08561	O08561	PI4KB_RAT	Pi4kb	Phosphatidylinositol 4-kinase beta	1	QLQSIWEQER	QLQSIWEQER	2	QLQSIWEQER2		4883.14	4477.23
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	QLQSVAELEQK	QLQSVAELEQK	2	QLQSVAELEQK2	5277.17	5685.6	5732.1
P47727	P47727	CBR1_RAT	Cbr1	Carbonyl reductase [NADPH] 1	1	QLQTEGLSPR	QLQTEGLSPR	2	QLQTEGLSPR2	10826.3	9197.64	15326.5
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	QLQTLFQEEK	QLQTLFQEEK	2	QLQTLFQEEK2	59096.8	77870.8	85228.6
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	QLQTLFQEEKELGTLHEEETQEGSQK	QLQTLFQEEKELGTLHEEETQEGSQK	4	QLQTLFQEEKELGTLHEEETQEGSQK4	16481	15841	13085.2
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QLQVDLQILR	QLQVDLQILR	2	QLQVDLQILR2	3331.79	4068.29	4445.08
Q9JLU4	Q9JLU4	SHAN3_RAT	Shank3	SH3 and multiple ankyrin repeat domains protein 3	1	QLQVEDAQER	QLQVEDAQER	2	QLQVEDAQER2	5202.31	3875.75	5558.4
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	QLQVNGEFVALPFHLDQK	QLQVNGEFVALPFHLDQK	3	QLQVNGEFVALPFHLDQK3	158319	128291	132207
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	QLQVVPLFGDMQIELAR	QLQVVPLFGDMQIELAR	2	QLQVVPLFGDMQIELAR2	96246.1	107129	99539.7
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	QLQVVPLFGDMQIELAR	QLQVVPLFGDMQIELAR	3	QLQVVPLFGDMQIELAR3	21285.5	34290	23076.2
Q63515	Q63515	C4BPB_RAT	C4bpb	C4b-binding protein beta chain	1	QLREGGITMEELK	QLREGGITMEELK	3	QLREGGITMEELK3	3990.61	4656.92	6743.76
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	QLRVEELEMTEDIR	QLRVEELEMTEDIR	3	QLRVEELEMTEDIR3	3024.51	4725.28	7024.84
P61314	P61314;A0A8I5ZY58;A0A8I6A471	RL15_RAT	Rpl15	Large ribosomal subunit protein eL15	0	QLSALHR	QLSALHR	2	QLSALHR2	8589.91	7816.64	7309.42
Q68FW9	Q68FW9	CSN3_RAT	Cops3	COP9 signalosome complex subunit 3	1	QLSAQGQMTQLCELINK	QLSAQGQMTQLC(UniMod:4)ELINK	3	QLSAQGQMTQLC(UniMod:4)ELINK3	19309.3	27558.8	16972.7
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	QLSDAISIVGR	QLSDAISIVGR	2	QLSDAISIVGR2	14136.4	12690.5	21544.5
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	QLSDVSAQLENSISPSDK	QLSDVSAQLENSISPSDK	2	QLSDVSAQLENSISPSDK2	1448.85	2572.92	3180.59
Q6AYH6	Q6AYH6	EMC10_RAT	Emc10	ER membrane protein complex subunit 10	1	QLSEEER	QLSEEER	2	QLSEEER2			53504.4
D4AEK9	D4AEK9	D4AEK9_RAT	Ccdc6	Coiled-coil domain containing 6	1	QLSESESSLEMDDER	QLSESESSLEMDDER	2	QLSESESSLEMDDER2	5441.53	2883.13	4348.97
P63331	A0A0G2JYA4;P63331	PP2AA_RAT	Ppp2ca	Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform	0	QLSESQVK	QLSESQVK	2	QLSESQVK2	201621	266906	247426
Q8K1P7	A0A8I6ARN7;Q8K1P7	SMCA4_RAT	Smarca4	Transcription activator BRG1	0	QLSEVFIQLPSR	QLSEVFIQLPSR	2	QLSEVFIQLPSR2		5305.27	
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	QLSFPLSSEPTQGSYK	QLSFPLSSEPTQGSYK	2	QLSFPLSSEPTQGSYK2	10545.3	12514.9	9335.51
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	QLSFSLSAEPIQGPYK	QLSFSLSAEPIQGPYK	2	QLSFSLSAEPIQGPYK2	702488	574965	414095
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	QLSFSLSAEPIQGPYK	QLSFSLSAEPIQGPYK	3	QLSFSLSAEPIQGPYK3	145701	121849	122373
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	QLSFSLSAEPIQGPYK	QLSFSLSAEPIQGPYK	4	QLSFSLSAEPIQGPYK4	8283.05	11065.2	23274.4
P14046	A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	QLSFSLSAEPIQGPYKIVILK	QLSFSLSAEPIQGPYKIVILK	3	QLSFSLSAEPIQGPYKIVILK3	91273.5	106832	66540.3
P14046	A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	QLSFSLSAEPIQGPYKIVILKQSGVK	QLSFSLSAEPIQGPYKIVILKQSGVK	3	QLSFSLSAEPIQGPYKIVILKQSGVK3	4655.49	7632.41	
P14046	A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	QLSFSLSAEPIQGPYKIVILKQSGVK	QLSFSLSAEPIQGPYKIVILKQSGVK	4	QLSFSLSAEPIQGPYKIVILKQSGVK4	27497.3	19348.8	14546.8
D3ZTN1	D3ZTN1	D3ZTN1_RAT	Tesc	Tescalcin	1	QLSGDQPTIR	QLSGDQPTIR	2	QLSGDQPTIR2	190404	186794	197075
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	QLSGEEVSWSK	QLSGEEVSWSK	2	QLSGEEVSWSK2	23289.1	12854	11805.1
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	QLSGQLAELK	QLSGQLAELK	2	QLSGQLAELK2	8092.71	5417.17	11473.6
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	QLSILPR	QLSILPR	2	QLSILPR2	26971	24196.5	25069.4
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	QLSLPLQEAQK	QLSLPLQEAQK	2	QLSLPLQEAQK2	72069.6	61638.2	55085.6
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	QLSLPLTQSK	QLSLPLTQSK	2	QLSLPLTQSK2	28399.4	30963.2	34208.7
P50282	P50282	MMP9_RAT	Mmp9	Matrix metalloproteinase-9	1	QLSLPQTGELDSETLK	QLSLPQTGELDSETLK	2	QLSLPQTGELDSETLK2	16966.6	21204.1	32026.8
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	QLSNEELEQFQK	QLSNEELEQFQK	2	QLSNEELEQFQK2	16585.5	21024.3	15740.8
A0A8I5Y868	A0A8I5Y868	A0A8I5Y868_RAT	Klc2	Kinesin light chain	1	QLSNLALLCQNQGK	QLSNLALLC(UniMod:4)QNQGK	2	QLSNLALLC(UniMod:4)QNQGK2	2119.86	3123.78	2802.17
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	QLSNPQQEVQNIFK	QLSNPQQEVQNIFK	2	QLSNPQQEVQNIFK2	27299.7	18685.2	20246
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	QLSPESLGTLQFGELNLGKEER	QLSPESLGTLQFGELNLGKEER	3	QLSPESLGTLQFGELNLGKEER3		3889.27	10326.8
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	QLSQALDTSNVMVK	QLSQALDTSNVMVK	2	QLSQALDTSNVMVK2	242751	241609	264817
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	QLSQALDTSNVMVK	QLSQALDTSNVMVK	3	QLSQALDTSNVMVK3	23139.6	28910.2	21769.8
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	QLSQALDTSNVMVKK	QLSQALDTSNVMVKK	3	QLSQALDTSNVMVKK3	1154.78	5025.52	3438.95
Q4G050	Q4G050	MKNK1_RAT	Mknk1	MAP kinase-interacting serine/threonine-protein kinase 1	1	QLSQHEENELAEEHEALAEGLCSMK	QLSQHEENELAEEHEALAEGLC(UniMod:4)SMK	4	QLSQHEENELAEEHEALAEGLC(UniMod:4)SMK4	6916.82	6712.33	14417.9
A0A0G2K089	A0A0G2K089	A0A0G2K089_RAT	Dennd4c	DENN domain containing 4C	1	QLSQLGLLTPVER	QLSQLGLLTPVER	2	QLSQLGLLTPVER2	5454.82	1691.35	9501.36
Q62991	Q62991	SCFD1_RAT	Scfd1	Sec1 family domain-containing protein 1	1	QLSQLGQK	QLSQLGQK	2	QLSQLGQK2	16833.3	18227.2	18247.7
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	QLSQNTYTPR	QLSQNTYTPR	2	QLSQNTYTPR2	31428.2	38289.9	32759.5
F7FHP0	F7FHP0	F7FHP0_RAT	Angptl3	Angiopoietin-like 3	1	QLSQQHIQIK	QLSQQHIQIK	2	QLSQQHIQIK2	5606.45	2566.37	1510.62
F7FHP0	F7FHP0	F7FHP0_RAT	Angptl3	Angiopoietin-like 3	1	QLSQQHIQIK	QLSQQHIQIK	3	QLSQQHIQIK3	84872.2	92916.5	127263
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	QLSQQSDGDRDLQEHR	QLSQQSDGDRDLQEHR	3	QLSQQSDGDRDLQEHR3	6258		4135.63
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	QLSQQSDGDRDLQEHR	QLSQQSDGDRDLQEHR	4	QLSQQSDGDRDLQEHR4	16500.9	9747.99	11575.6
Q4QQT4	Q4QQT4;Q5XI34	2AAB_RAT	Ppp2r1b	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	0	QLSQSLLPAIVELAEDAK	QLSQSLLPAIVELAEDAK	2	QLSQSLLPAIVELAEDAK2	29501.6	29522.1	28900.7
Q4QQT4	Q4QQT4;Q5XI34	2AAB_RAT	Ppp2r1b	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	0	QLSQSLLPAIVELAEDAK	QLSQSLLPAIVELAEDAK	3	QLSQSLLPAIVELAEDAK3	12995.6	11787.8	18749.9
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	QLSSLVR	QLSSLVR	2	QLSSLVR2	108008	117162	111195
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	QLSSPCGAWALR	QLSSPC(UniMod:4)GAWALR	2	QLSSPC(UniMod:4)GAWALR2	109111	117414	147327
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	QLSSSVTGLTNIEEENCQR	QLSSSVTGLTNIEEENC(UniMod:4)QR	3	QLSSSVTGLTNIEEENC(UniMod:4)QR3	7824.31	3307.6	11416.3
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	QLSSTIEELK	QLSSTIEELK	2	QLSSTIEELK2	37456.6	33351.3	32423.1
Q6XUX2	Q6XUX2	DUSTY_RAT	Dstyk	Dual serine/threonine and tyrosine protein kinase	1	QLSTFSHQLLQTR	QLSTFSHQLLQTR	3	QLSTFSHQLLQTR3	4770.44	7179.9	
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	QLSTVMR	QLSTVMR	2	QLSTVMR2	163244	153152	152234
A0A0G2K0G9	A0A0G2K0G9	A0A0G2K0G9_RAT	Rin3	Ras and Rab interactor 3	1	QLSVEVQDSIHR	QLSVEVQDSIHR	3	QLSVEVQDSIHR3	10355.9		12957.5
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	QLSVSDR	QLSVSDR	2	QLSVSDR2	26319.1	31809.2	28602
Q4QQS6	Q4QQS6	Q4QQS6_RAT	Alg5	dolichyl-phosphate beta-glucosyltransferase	1	QLSVVVPSYNEEK	QLSVVVPSYNEEK	2	QLSVVVPSYNEEK2	18188.8	19310.9	15925
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	QLTAHLQDVNR	QLTAHLQDVNR	2	QLTAHLQDVNR2	7945.47	10318.6	5856.12
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	QLTAHLQDVNR	QLTAHLQDVNR	3	QLTAHLQDVNR3	79393.5	73544.3	90387.2
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QLTAYMK	QLTAYMK	2	QLTAYMK2	49537.6	62856.1	64973.6
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	QLTEEDGVR	QLTEEDGVR	2	QLTEEDGVR2	11360.3	6626.56	10326.7
Q5XIR9	Q5XIR9	UBAC1_RAT	Ubac1	Ubiquitin-associated domain-containing protein 1	1	QLTEMGFPESR	QLTEMGFPESR	2	QLTEMGFPESR2	2195.93	7746.34	5800.08
F7EZE5	F7EZE5;A0A8I6ACC9;A0A0G2K5C5;A0A0G2K3P1;M0R5M7	F7EZE5_RAT	Btf3	Transcription factor BTF3	0	QLTEMLPSILNQLGADSLTSLR	QLTEMLPSILNQLGADSLTSLR	3	QLTEMLPSILNQLGADSLTSLR3	11076.5	6608.57	3686.93
F7EUW3	F7EUW3	F7EUW3_RAT	C2cd2l	C2CD2-like	1	QLTEPSGR	QLTEPSGR	2	QLTEPSGR2	44337.5	33486.3	37829.9
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	QLTEVLVFELSPDR	QLTEVLVFELSPDR	2	QLTEVLVFELSPDR2	5897.49	8051.47	2315.79
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	QLTFEEIAK	QLTFEEIAK	2	QLTFEEIAK2	86796.2	68239.6	78050
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	QLTGGVDAER	QLTGGVDAER	2	QLTGGVDAER2	22578.8	13212	15992.9
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	QLTIQVLLDR	QLTIQVLLDR	2	QLTIQVLLDR2	6057.3	4319.87	3931.63
D4AEK9	D4AEK9	D4AEK9_RAT	Ccdc6	Coiled-coil domain containing 6	1	QLTLEQLR	QLTLEQLR	2	QLTLEQLR2	80214.9	90787.4	97210.8
D4A3T0	D4A3T0;F1MAI3	D4A3T0_RAT	Sos1	SOS Ras/Rac guanine nucleotide exchange factor 1	0	QLTLLESDLYR	QLTLLESDLYR	2	QLTLLESDLYR2		4903.07	2958.99
D4A6W4	D4A6W4	D4A6W4_RAT	Rft1	Protein RFT1 homolog	1	QLTLPISK	QLTLPISK	2	QLTLPISK2	4858.37	7180.84	4955.54
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	QLTLQHHMGSADLNATFYGPVK	QLTLQHHMGSADLNATFYGPVK	4	QLTLQHHMGSADLNATFYGPVK4	6120.55	10938.5	4871.9
P37727	P37727	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	1	QLTMVEK	QLTMVEK	2	QLTMVEK2	20933.7	15992.4	22098.2
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	QLTNLVNVCLGSHINK	QLTNLVNVC(UniMod:4)LGSHINK	3	QLTNLVNVC(UniMod:4)LGSHINK3	6160.19	2625.44	5724.87
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	QLTNLVNVCLGSHINKK	QLTNLVNVC(UniMod:4)LGSHINKK	4	QLTNLVNVC(UniMod:4)LGSHINKK4	4568.34	6217.1	5576.35
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	QLTPPEGSSK	QLTPPEGSSK	2	QLTPPEGSSK2	107196	114697	117215
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	QLTPYIQR	QLTPYIQR	2	QLTPYIQR2	6.30219e+06	6.40623e+06	7.33077e+06
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	QLTQDMSTQR	QLTQDMSTQR	2	QLTQDMSTQR2	4042.65	7949.51	6887.22
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	QLTQEMMTEK	QLTQEMMTEK	2	QLTQEMMTEK2	8904.14	5298.82	8877.72
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	QLTSENLQSK	QLTSENLQSK	2	QLTSENLQSK2	12433.7	7272.16	12384.8
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	QLTSFIEK	QLTSFIEK	1	QLTSFIEK1	14000.4	9407.84	9266.98
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	QLTSFIEK	QLTSFIEK	2	QLTSFIEK2	1.75866e+06	1.32383e+06	1.15965e+06
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	QLTSQDTKPTCLAEFK	QLTSQDTKPTC(UniMod:4)LAEFK	3	QLTSQDTKPTC(UniMod:4)LAEFK3	37326.9	47610.5	39305
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	QLTSTQEALQAK	QLTSTQEALQAK	2	QLTSTQEALQAK2	5001.27	6318.53	5853.47
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QLTTYLTDR	QLTTYLTDR	2	QLTTYLTDR2	99151.2	103085	122162
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QLTTYLTDRIDAFQLPQEAQK	QLTTYLTDRIDAFQLPQEAQK	3	QLTTYLTDRIDAFQLPQEAQK3	19411.5	29049.3	25185.6
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	QLTVGVPK	QLTVGVPK	2	QLTVGVPK2	46573	53765.1	48159.3
Q9Z2G8	Q9Z2G8	NP1L1_RAT	Nap1l1	Nucleosome assembly protein 1-like 1	1	QLTVQMMQNPQILAALQER	QLTVQMMQNPQILAALQER	3	QLTVQMMQNPQILAALQER3	208930	149383	160353
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	QLTYEEQDLVWK	QLTYEEQDLVWK	2	QLTYEEQDLVWK2	6617.39		10228.6
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	QLTYLDVSK	QLTYLDVSK	2	QLTYLDVSK2	325448	334401	373369
D3ZSM9	D3ZSM9	D3ZSM9_RAT	Brat1	BRCA1-associated ATM activator 1	1	QLVADDTCLEK	QLVADDTC(UniMod:4)LEK	2	QLVADDTC(UniMod:4)LEK2		2475.55	
F1LVX1	F1LVX1	F1LVX1_RAT	Dnajc1	DnaJ heat shock protein family (Hsp40) member C1	1	QLVAIYEVLKDDERR	QLVAIYEVLKDDERR	4	QLVAIYEVLKDDERR4	6443.58	6182.93	3876.57
O88339	O88339	EPN1_RAT	Epn1	Epsin-1	1	QLVALLR	QLVALLR	2	QLVALLR2	20755	20574.5	13645.2
O88339	O88339	EPN1_RAT	Epn1	Epsin-1	1	QLVALLRDEDR	QLVALLRDEDR	3	QLVALLRDEDR3	25728.8	15358.6	15997.8
F1M3J4	O88563;F1M3J4;Q8CG09	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	0	QLVCLAR	QLVC(UniMod:4)LAR	2	QLVC(UniMod:4)LAR2	76359.4	82178.9	84980.8
D3ZZ26	D3ZZ26	D3ZZ26_RAT	Ppp1r3d	Protein phosphatase 1, regulatory subunit 3D	1	QLVCLER	QLVC(UniMod:4)LER	2	QLVC(UniMod:4)LER2	401252	373842	348982
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	QLVDAWIEMGSR	QLVDAWIEMGSR	2	QLVDAWIEMGSR2	7005.81	3835.54	8719.13
Q704S8	Q704S8	CACP_RAT	Crat	Carnitine O-acetyltransferase	1	QLVDEFQTSGGVGER	QLVDEFQTSGGVGER	2	QLVDEFQTSGGVGER2	3590.31	4315.44	4587.02
Q498D6	Q498D6	FGFR4_RAT	Fgfr4	Fibroblast growth factor receptor 4	1	QLVEALDK	QLVEALDK	1	QLVEALDK1	12048		
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	QLVEASER	QLVEASER	2	QLVEASER2	69100	69801.9	78202.5
Q5I0E7	Q5I0E7	TMED9_RAT	Tmed9	Transmembrane emp24 domain-containing protein 9	1	QLVEQVEQIQK	QLVEQVEQIQK	2	QLVEQVEQIQK2	303657	239331	271276
Q5I0E7	Q5I0E7	TMED9_RAT	Tmed9	Transmembrane emp24 domain-containing protein 9	1	QLVEQVEQIQK	QLVEQVEQIQK	3	QLVEQVEQIQK3	9993.18	8682.75	7784.82
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	QLVHEELRK	QLVHEELRK	3	QLVHEELRK3	33068.9	30871.2	28799.2
Q63797	Q63797	PSME1_RAT	Psme1	Proteasome activator complex subunit 1	1	QLVHELDEAEYQEIR	QLVHELDEAEYQEIR	2	QLVHELDEAEYQEIR2			2316
Q63797	Q63797	PSME1_RAT	Psme1	Proteasome activator complex subunit 1	1	QLVHELDEAEYQEIR	QLVHELDEAEYQEIR	3	QLVHELDEAEYQEIR3	24408.2	29916.1	29193.8
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	QLVHHFEIDVDIFEPQGISR	QLVHHFEIDVDIFEPQGISR	3	QLVHHFEIDVDIFEPQGISR3	1.10274e+07	1.24683e+07	9.72153e+06
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	QLVHHFEIDVDIFEPQGISR	QLVHHFEIDVDIFEPQGISR	4	QLVHHFEIDVDIFEPQGISR4	1.119e+06	1.0916e+06	1.01068e+06
Q7TPB4	Q7TPB4	CD276_RAT	Cd276	CD276 antigen	1	QLVHSFTEGR	QLVHSFTEGR	3	QLVHSFTEGR3	12990	4599.96	9432.73
O08775	O08775	VGFR2_RAT	Kdr	Vascular endothelial growth factor receptor 2	1	QLVILER	QLVILER	2	QLVILER2	80517	78983.3	64702.3
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	QLVLETLYALASNTK	QLVLETLYALASNTK	3	QLVLETLYALASNTK3	5612.08	5009.47	6825.3
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	QLVLEVMHNLMDR	QLVLEVMHNLMDR	3	QLVLEVMHNLMDR3	15646.3	9143.14	11942
A0A8I5ZQ24	A0A8I5ZQ24	A0A8I5ZQ24_RAT	Atp6v1h	V-type proton ATPase subunit H	1	QLVMNHMHHEDQQVR	QLVMNHMHHEDQQVR	3	QLVMNHMHHEDQQVR3		3578.69	5049.88
A0A8I5ZQ24	A0A8I5ZQ24	A0A8I5ZQ24_RAT	Atp6v1h	V-type proton ATPase subunit H	1	QLVMNHMHHEDQQVR	QLVMNHMHHEDQQVR	4	QLVMNHMHHEDQQVR4	3839.35	2459.66	5216.03
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	QLVPDASK	QLVPDASK	2	QLVPDASK2	174301	214434	227565
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	QLVPLMR	QLVPLMR	2	QLVPLMR2	41950.5	45916.3	49333.9
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	QLVQALQISLEK	QLVQALQISLEK	2	QLVQALQISLEK2	5699.29	4027.63	3062.43
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	QLVQTTANELDR	QLVQTTANELDR	2	QLVQTTANELDR2	14321.2	16191.3	14168.8
A0A8J8YNE4	A0A8J8YNE4	A0A8J8YNE4_RAT	Apool	MICOS complex subunit	1	QLVRPEQLPIYTAPPLHSK	QLVRPEQLPIYTAPPLHSK	3	QLVRPEQLPIYTAPPLHSK3	10663	10145.5	5490.94
A0A8J8YNE4	A0A8J8YNE4	A0A8J8YNE4_RAT	Apool	MICOS complex subunit	1	QLVRPEQLPIYTAPPLHSK	QLVRPEQLPIYTAPPLHSK	4	QLVRPEQLPIYTAPPLHSK4	58415.7	51140.4	65358.9
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	QLVSAGWTEEPVALVQR	QLVSAGWTEEPVALVQR	2	QLVSAGWTEEPVALVQR2		4200.09	1249.73
P86182	P86182	CCD22_RAT	Ccdc22	Coiled-coil domain-containing protein 22	1	QLVSELETLPK	QLVSELETLPK	2	QLVSELETLPK2	17114.2	7081.25	7127.05
P97711	P97711	GRK6_RAT	Grk6	G protein-coupled receptor kinase 6	1	QLVSNCAQR	QLVSNC(UniMod:4)AQR	2	QLVSNC(UniMod:4)AQR2	8582.86	4147.14	27253.8
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	QLVSQNK	QLVSQNK	2	QLVSQNK2	14219.6	34312.5	22312.3
Q66H91	Q66H91	GIT2_RAT	Git2	ARF GTPase-activating protein GIT2	1	QLVTITTK	QLVTITTK	2	QLVTITTK2	9512.1	9006.89	7738.98
Q9Z272	Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	1	QLVTITTR	QLVTITTR	2	QLVTITTR2	9169.9	8033.32	9113.42
Q63009	Q63009;A0A0G2K9I8	ANM1_RAT	Prmt1	Protein arginine N-methyltransferase 1	0	QLVTNACLIK	QLVTNAC(UniMod:4)LIK	2	QLVTNAC(UniMod:4)LIK2	27307.8	24011.1	24423.7
Q62784	Q62784	INP4A_RAT	Inpp4a	Inositol polyphosphate-4-phosphatase type I A	1	QLVTVCDCK	QLVTVC(UniMod:4)DC(UniMod:4)K	2	QLVTVC(UniMod:4)DC(UniMod:4)K2	14918	5969.31	6817.97
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	QLVVLAVENVALALMEIK	QLVVLAVENVALALMEIK	3	QLVVLAVENVALALMEIK3	7508.71	678.095	
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	QLVWQVQEK	QLVWQVQEK	2	QLVWQVQEK2	49128.1	46273.9	43280.9
A0A8I5ZMX2	A0A8I5ZMX2;D3ZA74;D3ZTE7	A0A8I5ZMX2_RAT	Adamts3	ADAM metallopeptidase with thrombospondin type 1, motif 3	0	QLWCSHPDNPYFCK	QLWC(UniMod:4)SHPDNPYFC(UniMod:4)K	3	QLWC(UniMod:4)SHPDNPYFC(UniMod:4)K3	5488.5	4346.77	3033.71
A2RRU1	A2RRU1	GYS1_RAT	Gys1	Glycogen [starch] synthase, muscle	1	QLWDTANTVK	QLWDTANTVK	2	QLWDTANTVK2	13637.3	21266.6	36784.4
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	QLWGLLIEETEK	QLWGLLIEETEK	2	QLWGLLIEETEK2	79517.6	64359.5	91881.4
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	QLWGLLIEETEK	QLWGLLIEETEK	3	QLWGLLIEETEK3	7079.01	7896.96	2266.74
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	QLWGLLIEETEKR	QLWGLLIEETEKR	2	QLWGLLIEETEKR2	23076.3	27320.9	13289.3
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	QLWGLLIEETEKR	QLWGLLIEETEKR	3	QLWGLLIEETEKR3	323769	372275	392011
D3ZRI9	D3ZRI9	D3ZRI9_RAT	Gan	Gigaxonin	1	QLWIELAPLSMPR	QLWIELAPLSMPR	2	QLWIELAPLSMPR2	11607.9	9946.31	8703.02
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	QLWLEVK	QLWLEVK	2	QLWLEVK2	7435.68	4396.92	
Q3MQ06	Q3MQ06	ATG5_RAT	Atg5	Autophagy protein 5	1	QLWMGLQNDR	QLWMGLQNDR	2	QLWMGLQNDR2	14090.9	10431.2	15669.9
Q62825	Q62825	EXOC3_RAT	Exoc3	Exocyst complex component 3	1	QLWMVLQR	QLWMVLQR	2	QLWMVLQR2	14270.8	21448.4	18912.3
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	QLWPTATER	QLWPTATER	2	QLWPTATER2	112933	99605.5	146878
B0BNI5	B0BNI5	OLFL3_RAT	Olfml3	Olfactomedin-like protein 3	1	QLYAWDDGYQIVYK	QLYAWDDGYQIVYK	2	QLYAWDDGYQIVYK2	14902.3	13799.3	8697.8
Q66H86	Q66H86	OLFL1_RAT	Olfml1	Olfactomedin-like protein 1	1	QLYAWNEGYQIIYK	QLYAWNEGYQIIYK	2	QLYAWNEGYQIIYK2	3342.88	14078.2	10508.7
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	QLYDHTIDDSMICAGNLQK	QLYDHTIDDSMIC(UniMod:4)AGNLQK	3	QLYDHTIDDSMIC(UniMod:4)AGNLQK3	1.78731e+06	1.80543e+06	1.98859e+06
D3ZHK4	D3ZHK4	D3ZHK4_RAT	Rb1cc1	RB1-inducible coiled-coil 1	1	QLYEAEK	QLYEAEK	2	QLYEAEK2		4650.27	
Q32KJ5	Q32KJ5	Q32KJ5_RAT	Gns	N-acetylglucosamine-6-sulfatase	1	QLYEFDIK	QLYEFDIK	2	QLYEFDIK2	12022.4		11401.7
D4A1B6	D4A1B6	D4A1B6_RAT	Abhd13	Abhydrolase domain containing 13	1	QLYELSPSR	QLYELSPSR	2	QLYELSPSR2	17000.9	8534.3	8711.66
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	QLYEMVLTYSFHQPK	QLYEMVLTYSFHQPK	3	QLYEMVLTYSFHQPK3	15979	16382.7	14413.8
D4A305	D4A305	D4A305_RAT	Mix23	Protein MIX23	1	QLYESLMAAHVSR	QLYESLMAAHVSR	3	QLYESLMAAHVSR3	15405.4	10647	10156
A0A0G2JWA3	A0A0G2JWA3	A0A0G2JWA3_RAT	Xpo7	Exportin 7	1	QLYETTDTTTR	QLYETTDTTTR	2	QLYETTDTTTR2	5080.17	4659.05	6739.23
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	QLYFTCTAFGASR	QLYFTC(UniMod:4)TAFGASR	2	QLYFTC(UniMod:4)TAFGASR2	8532.41	6738.07	2497.39
D3ZNV6	D3ZNV6	D3ZNV6_RAT	Elmod2	ELMO domain containing 2	1	QLYHDVENVR	QLYHDVENVR	3	QLYHDVENVR3	5528.92	5608.59	7647.12
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	QLYIDFR	QLYIDFR	2	QLYIDFR2	411231	362147	338489
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	QLYLTVLSK	QLYLTVLSK	2	QLYLTVLSK2	3370.39	9522.46	7039.98
M0RAD5	M0RAD5	M0RAD5_RAT	Clpp	ATP-dependent Clp protease proteolytic subunit	1	QLYNIYAK	QLYNIYAK	2	QLYNIYAK2	17228.1	15351.5	9908.17
Q9JI03	Q9JI03	CO5A1_RAT	Col5a1	Collagen alpha-1(V) chain	1	QLYPESDFPEDFSILTTVK	QLYPESDFPEDFSILTTVK	3	QLYPESDFPEDFSILTTVK3	9475.06	3523.35	5024.06
D3ZED8	D3ZED8	D3ZED8_RAT	Pmel	Premelanosome protein	1	QLYPEWTEVQGSNCWR	QLYPEWTEVQGSNC(UniMod:4)WR	3	QLYPEWTEVQGSNC(UniMod:4)WR3	141921	156952	155633
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	QLYQTLTDYDIR	QLYQTLTDYDIR	2	QLYQTLTDYDIR2	36964	42753.4	36021.8
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	QLYRPEPLPEVALPGSFVVR	QLYRPEPLPEVALPGSFVVR	3	QLYRPEPLPEVALPGSFVVR3	17138.2	20013.1	13755.3
Q5U300	Q5U300;A0A8I5ZVX0;A0A8I6A544	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	0	QLYVLGHEAMK	QLYVLGHEAMK	2	QLYVLGHEAMK2	29492.9	18950.9	9690.79
Q5U300	Q5U300;A0A8I5ZVX0;A0A8I6A544	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	0	QLYVLGHEAMK	QLYVLGHEAMK	3	QLYVLGHEAMK3	64032.7	55009.4	43695.9
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	QLYVLGLPAMQR	QLYVLGLPAMQR	2	QLYVLGLPAMQR2	68513	72131.7	73964.2
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	QLYVLGLPAMQR	QLYVLGLPAMQR	3	QLYVLGLPAMQR3	5591.14	2781.5	4244.5
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	QMAAVAEK	QMAAVAEK	2	QMAAVAEK2	19405	20846.7	17763.3
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	QMAAVLLR	QMAAVLLR	2	QMAAVLLR2	153846	169351	169914
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	QMAEIAVNAVLTVADMER	QMAEIAVNAVLTVADMER	3	QMAEIAVNAVLTVADMER3	20179.1	16379	28322.2
Q63372	Q63372	NRX1A_RAT	Nrxn1	Neurexin-1	1	QMAEIQSTAGVKPSCSR	QMAEIQSTAGVKPSC(UniMod:4)SR	3	QMAEIQSTAGVKPSC(UniMod:4)SR3	13090	16061.3	5531.62
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	QMAELATSHK	QMAELATSHK	2	QMAELATSHK2	3604.57	5122.39	4981.32
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	QMAEQCER	QMAEQC(UniMod:4)ER	2	QMAEQC(UniMod:4)ER2			3588.46
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	QMAFMLGR	QMAFMLGR	2	QMAFMLGR2	63242.3	62452.8	61882.9
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	QMAQPSTAEPDCTR	QMAQPSTAEPDC(UniMod:4)TR	2	QMAQPSTAEPDC(UniMod:4)TR2	11013.6	19173.8	16344.7
B5DF93	B5DF93	PATL1_RAT	Patl1	Protein PAT1 homolog 1	1	QMAVPSFNQQILCPK	QMAVPSFNQQILC(UniMod:4)PK	2	QMAVPSFNQQILC(UniMod:4)PK2	3983.9	4623.96	6093.01
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	QMCICADFEK	QMC(UniMod:4)IC(UniMod:4)ADFEK	2	QMC(UniMod:4)IC(UniMod:4)ADFEK2	27351.1	26571.8	26545.1
Q6AY30	Q6AY30	SCPDL_RAT	Sccpdh	Saccharopine dehydrogenase-like oxidoreductase	1	QMDESSFTMTFFGQGYSHGVSAEK	QMDESSFTMTFFGQGYSHGVSAEK	3	QMDESSFTMTFFGQGYSHGVSAEK3	15888.4	8659.68	7368.63
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	QMDLLQEFYETTLEALK	QMDLLQEFYETTLEALK	3	QMDLLQEFYETTLEALK3		3068.1	3543.15
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	QMDLLQEFYETTLEALKDAK	QMDLLQEFYETTLEALKDAK	3	QMDLLQEFYETTLEALKDAK3	3780.36		
Q5BJM5	Q5BJM5	PKHO1_RAT	Plekho1	Pleckstrin homology domain-containing family O member 1	1	QMDLQTPDSHLR	QMDLQTPDSHLR	3	QMDLQTPDSHLR3	9160.34	13884.5	16486.2
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	QMDNNWTLMK	QMDNNWTLMK	2	QMDNNWTLMK2	29109.3	25705.3	20649.5
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	QMDPGDFINSSETR	QMDPGDFINSSETR	2	QMDPGDFINSSETR2	18459.3	19847.9	22317.4
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	QMDPTDFVNSSETR	QMDPTDFVNSSETR	2	QMDPTDFVNSSETR2	7194.27	6481.8	4510.24
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	QMDQVPFVSLIEDLKK	QMDQVPFVSLIEDLKK	3	QMDQVPFVSLIEDLKK3	5106.21	7187.56	3802.88
D4A8N1	D4A8N1	D4A8N1_RAT	Dpm1	Dolichol-phosphate mannosyltransferase subunit 1	1	QMDYTVGEVPISFVDR	QMDYTVGEVPISFVDR	2	QMDYTVGEVPISFVDR2	24398.8	16206.2	17122.3
D4A8N1	D4A8N1	D4A8N1_RAT	Dpm1	Dolichol-phosphate mannosyltransferase subunit 1	1	QMDYTVGEVPISFVDR	QMDYTVGEVPISFVDR	3	QMDYTVGEVPISFVDR3	7484.42	9836.14	3453.21
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	QMEALQGELK	QMEALQGELK	2	QMEALQGELK2	15635.3	13899.7	19549.5
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	QMEAMDMEVMEAR	QMEAMDMEVMEAR	2	QMEAMDMEVMEAR2	3100.14	3441.94	4456.99
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	QMEAQLEEK	QMEAQLEEK	2	QMEAQLEEK2	36033.7	25256.8	40410.7
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QMEDEKNSFR	QMEDEKNSFR	3	QMEDEKNSFR3	2940.67	4862.66	
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	QMEELIEEPGLTCCICR	QMEELIEEPGLTC(UniMod:4)C(UniMod:4)IC(UniMod:4)R	3	QMEELIEEPGLTC(UniMod:4)C(UniMod:4)IC(UniMod:4)R3	11981.7	11152.4	14131.2
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	QMELHPDKPPILLVAGK	QMELHPDKPPILLVAGK	3	QMELHPDKPPILLVAGK3	11799	5862.69	4283.59
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	QMELHPDKPPILLVAGK	QMELHPDKPPILLVAGK	4	QMELHPDKPPILLVAGK4	15693	19828.2	17472.8
Q5XFX0	Q5XFX0	TAGL2_RAT	Tagln2	Transgelin-2	1	QMEQISQFLQAAER	QMEQISQFLQAAER	2	QMEQISQFLQAAER2	268618	195337	156241
Q5XFX0	Q5XFX0	TAGL2_RAT	Tagln2	Transgelin-2	1	QMEQISQFLQAAER	QMEQISQFLQAAER	3	QMEQISQFLQAAER3	142097	136376	225709
Q5BJT7	Q5BJT7	CCD93_RAT	Ccdc93	Coiled-coil domain-containing protein 93	1	QMEQIVEGIK	QMEQIVEGIK	2	QMEQIVEGIK2	12589.3	15202.5	7974.77
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	QMEQTYWQANPFR	QMEQTYWQANPFR	2	QMEQTYWQANPFR2	158640	173762	168445
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	QMEQTYWQANPFR	QMEQTYWQANPFR	3	QMEQTYWQANPFR3	45088.9	44317	58409.1
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	QMETSTLQNEVQR	QMETSTLQNEVQR	2	QMETSTLQNEVQR2			5953.42
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	QMEVAQANR	QMEVAQANR	2	QMEVAQANR2	129968	118829	127911
P52303	P52303	AP1B1_RAT	Ap1b1	AP-1 complex subunit beta-1	1	QMFLATWK	QMFLATWK	2	QMFLATWK2	59427.8	61611.7	74067.4
Q6IRJ7	Q6IRJ7	Q6IRJ7_RAT	Anxa7	Annexin	1	QMFTQMYQK	QMFTQMYQK	2	QMFTQMYQK2	57513.1	39078.4	46613
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	QMGIDDSSK	QMGIDDSSK	2	QMGIDDSSK2	86611.9	67981.6	75313.9
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	QMGIDDSSKENR	QMGIDDSSKENR	3	QMGIDDSSKENR3	43025.2	61958.3	49702
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	QMGLFNFRPSVR	QMGLFNFRPSVR	3	QMGLFNFRPSVR3	6744.59	9457.67	9862.49
G3V783	G3V783	G3V783_RAT	Ripk2	Receptor-interacting serine/threonine-protein kinase 2	1	QMGLQPYPEVLLVSR	QMGLQPYPEVLLVSR	2	QMGLQPYPEVLLVSR2	5894.72	6087.71	11388.4
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	QMGSGDAYPHQYSLK	QMGSGDAYPHQYSLK	3	QMGSGDAYPHQYSLK3	34192.6	44473.6	46454.8
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	QMGYQCFVSFFDLR	QMGYQC(UniMod:4)FVSFFDLR	2	QMGYQC(UniMod:4)FVSFFDLR2	9746.49	3743.48	10663.7
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	QMIAIADENQNHHLEPEEILK	QMIAIADENQNHHLEPEEILK	3	QMIAIADENQNHHLEPEEILK3	31612.4	36045.6	31311.2
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	QMIAIADENQNHHLEPEEILK	QMIAIADENQNHHLEPEEILK	4	QMIAIADENQNHHLEPEEILK4	68046.5	63152.1	74187.5
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	QMICAGYK	QMIC(UniMod:4)AGYK	2	QMIC(UniMod:4)AGYK2	112645	102545	117148
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	QMILTGCVAFAR	QMILTGC(UniMod:4)VAFAR	2	QMILTGC(UniMod:4)VAFAR2	4755.33	3530.24	4365.34
Q3T1I4	Q3T1I4	PRRC1_RAT	Prrc1	Protein PRRC1	1	QMIYSAAK	QMIYSAAK	2	QMIYSAAK2	26128.2	16349.2	23064.3
Q03346	Q03346	MPPB_RAT	Pmpcb	Mitochondrial-processing peptidase subunit beta	1	QMLCYNR	QMLC(UniMod:4)YNR	2	QMLC(UniMod:4)YNR2	16823	17141.4	14572.3
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	QMLEALNFLHGK	QMLEALNFLHGK	2	QMLEALNFLHGK2	3261.45	3718.7	
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	QMLEALNFLHGK	QMLEALNFLHGK	3	QMLEALNFLHGK3	16685.9	11945.1	8940.22
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	QMLEDVQER	QMLEDVQER	2	QMLEDVQER2	16853.3	11705.4	14308.5
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	QMLESNKDSAK	QMLESNKDSAK	2	QMLESNKDSAK2	4050.07		1777.01
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	QMLESNKDSAK	QMLESNKDSAK	3	QMLESNKDSAK3			18167.6
B5DEN9	B5DEN9	VPS28_RAT	Vps28	Vacuolar protein sorting-associated protein 28 homolog	1	QMLFDLESAYNAFNR	QMLFDLESAYNAFNR	2	QMLFDLESAYNAFNR2	22354.7	16283.8	12736.8
B5DEN9	B5DEN9	VPS28_RAT	Vps28	Vacuolar protein sorting-associated protein 28 homolog	1	QMLFDLESAYNAFNR	QMLFDLESAYNAFNR	3	QMLFDLESAYNAFNR3	6872.84	3456.27	3987.24
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	QMLFYVTAFDRDR	QMLFYVTAFDRDR	3	QMLFYVTAFDRDR3	14695.3		
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	QMLLDWCR	QMLLDWC(UniMod:4)R	2	QMLLDWC(UniMod:4)R2	25401.2	27472.5	26257.7
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	QMLLFTHIR	QMLLFTHIR	3	QMLLFTHIR3	24402.2	17008.5	17805.3
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	QMLPLNTNIR	QMLPLNTNIR	2	QMLPLNTNIR2	20372.6	12846.6	15392
Q5M824	Q5M824	SHC1_RAT	Shc1	SHC-transforming protein 1	1	QMLPPPPCPGR	QMLPPPPC(UniMod:4)PGR	2	QMLPPPPC(UniMod:4)PGR2	18894	9735.7	10379.6
P97711	P97711	GRK6_RAT	Grk6	G protein-coupled receptor kinase 6	1	QMLQFPHISQCEELR	QMLQFPHISQC(UniMod:4)EELR	3	QMLQFPHISQC(UniMod:4)EELR3	13269	18435.9	12041.1
Q5FWT9	Q5FWT9	SIKE1_RAT	Sike1	Suppressor of IKBKE 1	1	QMLQLMVAK	QMLQLMVAK	2	QMLQLMVAK2	26860.5	26929.6	25291.3
Q8VHI8	Q8VHI8	SEC20_RAT	Bnip1	Vesicle transport protein SEC20	1	QMLSNQTSWR	QMLSNQTSWR	2	QMLSNQTSWR2	3843.76	4712.13	6913.63
O35346	O35346	FAK1_RAT	Ptk2	Focal adhesion kinase 1	1	QMLTAAHALAVDAK	QMLTAAHALAVDAK	3	QMLTAAHALAVDAK3	4907.12	5298.51	3709.62
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	QMLTASHTLAVDAK	QMLTASHTLAVDAK	2	QMLTASHTLAVDAK2		5067.25	
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	QMLTASHTLAVDAK	QMLTASHTLAVDAK	3	QMLTASHTLAVDAK3	17954.6	12103.5	16798.9
F1M8V2	F1M8V2	F1M8V2_RAT	Ube4b	Ubiquitin conjugation factor E4	1	QMLTESMLEPVPELK	QMLTESMLEPVPELK	2	QMLTESMLEPVPELK2	15353.2	10355.9	8567.94
Q2KJ09	Q2KJ09	UBP16_RAT	Usp16	Ubiquitin carboxyl-terminal hydrolase 16	1	QMLVSLAPPVLTLHLK	QMLVSLAPPVLTLHLK	3	QMLVSLAPPVLTLHLK3	12719.3	14574.9	
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	QMMDVSR	QMMDVSR	2	QMMDVSR2	13594.1	11571.6	16401.8
Q9QY17	Q9QY17	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	1	QMMGGFK	QMMGGFK	2	QMMGGFK2	115682	97041.6	152678
Q63433	Q63433	PKN1_RAT	Pkn1	Serine/threonine-protein kinase N1	1	QMNIDVATWVR	QMNIDVATWVR	2	QMNIDVATWVR2	4459.17	6369.96	6839.38
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	QMNPYIQVTSHQNR	QMNPYIQVTSHQNR	2	QMNPYIQVTSHQNR2	5821.49	6075.79	6772.82
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	QMNPYIQVTSHQNR	QMNPYIQVTSHQNR	3	QMNPYIQVTSHQNR3	81895.2	87174.6	93886.9
D3ZK56	D3ZK56	D3ZK56_RAT	Rap2c	Ras-related protein Rap-2	1	QMNYSSLPEK	QMNYSSLPEK	2	QMNYSSLPEK2	9914.91	11286.1	14235.9
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	QMPEPEQLK	QMPEPEQLK	2	QMPEPEQLK2	92939.1	84009.7	64449.3
A0A8I6AHX6	A0A8I6AHX6	A0A8I6AHX6_RAT	ENSRNOG00000063523	Ig-like domain-containing protein	1	QMPGQNIEWIGNIYGGNGGTGYNQK	QMPGQNIEWIGNIYGGNGGTGYNQK	3	QMPGQNIEWIGNIYGGNGGTGYNQK3	10547	5463.38	12862.5
A0A0G2JZH8	A0A0G2JZH8	A0A0G2JZH8_RAT	Pdhx	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	QMPGVNVTWDGEGPK	QMPGVNVTWDGEGPK	2	QMPGVNVTWDGEGPK2	24861.4	16200.7	17166.3
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QMPIGGDVPALQLQYDHCK	QMPIGGDVPALQLQYDHC(UniMod:4)K	3	QMPIGGDVPALQLQYDHC(UniMod:4)K3	133197	151798	142524
Q9JHX4	Q9JHX4	CASP8_RAT	Casp8	Caspase-8	1	QMPQPIFTLR	QMPQPIFTLR	2	QMPQPIFTLR2	15474.1	5634.55	10290.4
D4A415	D4A415	D4A415_RAT	Abraxas2	Abraxas 2, BRISC complex subunit	1	QMPSESLEPAFSPR	QMPSESLEPAFSPR	2	QMPSESLEPAFSPR2	64136.7	64355.8	61424.2
D4A415	D4A415	D4A415_RAT	Abraxas2	Abraxas 2, BRISC complex subunit	1	QMPSESLEPAFSPR	QMPSESLEPAFSPR	3	QMPSESLEPAFSPR3	8456.8	12049.4	8762.23
D3ZAQ0	D3ZAQ0	D3ZAQ0_RAT	Fundc2	FUN14 domain containing 2	1	QMPTEVGSK	QMPTEVGSK	2	QMPTEVGSK2	46561.3	41630.5	49582.4
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	QMPYFGEK	QMPYFGEK	2	QMPYFGEK2	30647.8	30344.7	23815.3
D4A7X9	D4A7X9	D4A7X9_RAT	Myo1f	Myosin IF	1	QMPYFTDR	QMPYFTDR	2	QMPYFTDR2			15884.9
Q80Z70	Q80Z70	SE1L1_RAT	Sel1l	Protein sel-1 homolog 1	1	QMQEAEAIYQSGMK	QMQEAEAIYQSGMK	2	QMQEAEAIYQSGMK2	10252	9364.72	9786.38
Q80Z70	Q80Z70	SE1L1_RAT	Sel1l	Protein sel-1 homolog 1	1	QMQEAEAIYQSGMK	QMQEAEAIYQSGMK	3	QMQEAEAIYQSGMK3	3048.94	10581.9	9264.37
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	QMQEHEQDSELREQMSGYK	QMQEHEQDSELREQMSGYK	4	QMQEHEQDSELREQMSGYK4	7955.22		8933.08
Q5M936	Q5M936	TOR3A_RAT	Tor3a	Torsin-3A	1	QMQETQR	QMQETQR	2	QMQETQR2			12333.4
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	QMQLENVSVALEFLDR	QMQLENVSVALEFLDR	2	QMQLENVSVALEFLDR2	49726.7	53592	60706
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	QMQLENVSVALEFLDR	QMQLENVSVALEFLDR	3	QMQLENVSVALEFLDR3	194738	123216	161448
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	QMQLENVSVALEFLDRESIK	QMQLENVSVALEFLDRESIK	3	QMQLENVSVALEFLDRESIK3	85951.1	94511.2	96401.9
Q3ZU82	Q3ZU82	GOGA5_RAT	Golga5	Golgin subfamily A member 5	1	QMQSEFATR	QMQSEFATR	2	QMQSEFATR2	15790.6	5819.64	8137.08
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	QMQTHFLALK	QMQTHFLALK	2	QMQTHFLALK2	904.796	3667.75	2282.2
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	QMQTHFLALK	QMQTHFLALK	3	QMQTHFLALK3	10304.9	10208	9517.57
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	QMQVLHPAAR	QMQVLHPAAR	2	QMQVLHPAAR2	24033.8	27893.8	16264.7
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	QMQVLHPAAR	QMQVLHPAAR	3	QMQVLHPAAR3	259343	302189	286044
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	QMQVLLAQVQNSEQLLR	QMQVLLAQVQNSEQLLR	3	QMQVLLAQVQNSEQLLR3	11390.4	16817.1	3791.49
Q62771	Q62771	STA5A_RAT	Stat5a	Signal transducer and activator of transcription 5A	1	QMQVLYGQHFPIEVR	QMQVLYGQHFPIEVR	3	QMQVLYGQHFPIEVR3	12369.5	19380.3	17169.7
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	QMSCLMEALEDKR	QMSC(UniMod:4)LMEALEDKR	3	QMSC(UniMod:4)LMEALEDKR3	10823.8	3134.06	6374.05
A0A8I6AH91	A0A8I5ZWT0;Q6AYU2;A0A8I6AH91	A0A8I6AH91_RAT	Pcbp1	Poly(rC) binding protein 1	0	QMSGAQIK	QMSGAQIK	1	QMSGAQIK1		979.141	1519.01
A0A8I6AH91	A0A8I5ZWT0;Q6AYU2;A0A8I6AH91	A0A8I6AH91_RAT	Pcbp1	Poly(rC) binding protein 1	0	QMSGAQIK	QMSGAQIK	2	QMSGAQIK2	94005.8	89982.5	153657
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	QMSLCGTPEK	QMSLC(UniMod:4)GTPEK	2	QMSLC(UniMod:4)GTPEK2	21320.9	23688.5	25702.1
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	QMSLLLR	QMSLLLR	2	QMSLLLR2	1.28066e+06	1.21252e+06	1.40256e+06
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	QMTDPNVALTFLEK	QMTDPNVALTFLEK	2	QMTDPNVALTFLEK2	22858.5	22317.3	25156.3
Q66HC5	Q66HC5	NUP93_RAT	Nup93	Nuclear pore complex protein Nup93	1	QMTDVVLTPATDALK	QMTDVVLTPATDALK	2	QMTDVVLTPATDALK2	5853.77	7317.5	3861.82
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	QMTEEVER	QMTEEVER	2	QMTEEVER2	33047.4	21633.2	35816.9
Q63175	Q63175	SERC5_RAT	Serinc5	Serine incorporator 5	1	QMTEHIPFFEDFCK	QMTEHIPFFEDFC(UniMod:4)K	3	QMTEHIPFFEDFC(UniMod:4)K3	8339.42	7740.35	3691.97
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	QMTIHMEELK	QMTIHMEELK	3	QMTIHMEELK3	20881.6	17969.6	24617
Q5M871	Q5M871	FAIM3_RAT	Fcmr	Fas apoptotic inhibitory molecule 3	1	QMTNPAICATVVSNIFVK	QMTNPAIC(UniMod:4)ATVVSNIFVK	3	QMTNPAIC(UniMod:4)ATVVSNIFVK3	8958.9	14028.8	11423.8
D3ZZJ7	D3ZZJ7	D3ZZJ7_RAT	Dcp1b	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	QMTSSSAICDNPK	QMTSSSAIC(UniMod:4)DNPK	2	QMTSSSAIC(UniMod:4)DNPK2	5397.76	4180.73	4257.73
Q9JI51	Q9JI51	VTI1A_RAT	Vti1a	Vesicle transport through interaction with t-SNAREs homolog 1A	1	QMVANVEK	QMVANVEK	2	QMVANVEK2	44094.3	44076.1	56049.8
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	QMVEDSQWLR	QMVEDSQWLR	2	QMVEDSQWLR2	38129	30082.7	22373
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QMVEHGGFYR	QMVEHGGFYR	3	QMVEHGGFYR3	137058	186971	153474
Q9JLZ1	Q9JLZ1	GLRX3_RAT	Glrx3	Glutaredoxin-3	1	QMVEILHK	QMVEILHK	2	QMVEILHK2	2410.64	21576.2	5992.68
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	QMVETELK	QMVETELK	1	QMVETELK1	21740.5	19724	18595.7
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	QMVETELK	QMVETELK	2	QMVETELK2	2.25749e+06	2.23095e+06	2.54082e+06
P62850	P62850;D4ACJ1	RS24_RAT	Rps24	Small ribosomal subunit protein eS24	0	QMVIDVLHPGK	QMVIDVLHPGK	3	QMVIDVLHPGK3	108691	58009.3	154740
A0A1W2Q5Z7	A0A1W2Q5Z7	A0A1W2Q5Z7_RAT	St3gal1	ST3 beta-galactoside alpha-2,3-sialyltransferase 1	1	QMVLEFSENFR	QMVLEFSENFR	2	QMVLEFSENFR2	9586.96	1953.18	1978.86
Q32Q55	Q32Q55	Q32Q55_RAT	Ces2h	Carboxylic ester hydrolase	1	QMVQAILQK	QMVQAILQK	2	QMVQAILQK2	3547.69		3382.13
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	QMVTLEVLSYHASAAEEETR	QMVTLEVLSYHASAAEEETR	3	QMVTLEVLSYHASAAEEETR3	190164	188277	174736
Q80T18	Q80T18	GMFG_RAT	Gmfg	Glia maturation factor gamma	1	QMVVLEDEFQNVSPEELK	QMVVLEDEFQNVSPEELK	3	QMVVLEDEFQNVSPEELK3	17603.5	8063.95	7611.06
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	QMVWCSR	QMVWC(UniMod:4)SR	2	QMVWC(UniMod:4)SR2	8006.12		9770.66
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	QMWAEFEWENK	QMWAEFEWENK	2	QMWAEFEWENK2	65213.2	61063.6	71850.2
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	QMYHAPTDCATIR	QMYHAPTDC(UniMod:4)ATIR	3	QMYHAPTDC(UniMod:4)ATIR3	125463	142786	134084
A0A8I6AD03	A0A8I6AD03	A0A8I6AD03_RAT	Aplp1	Amyloid beta precursor like protein 1	1	QMYPELHIAR	QMYPELHIAR	3	QMYPELHIAR3	18939.2	15992.8	14970.4
A0A8I6ACU2	A0A8I6ACU2	A0A8I6ACU2_RAT	Ubap2l	Ubiquitin associated protein 2-like	1	QNAISQPASGNTFSHHSMVSMLGK	QNAISQPASGNTFSHHSMVSMLGK	4	QNAISQPASGNTFSHHSMVSMLGK4	3474.83	4819.86	5009.74
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	QNALDQLLR	QNALDQLLR	2	QNALDQLLR2	10266.9		5161.64
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	QNAPMTLEEFRK	QNAPMTLEEFRK	3	QNAPMTLEEFRK3	19647.5	11631.5	22688.7
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	QNAPWPLK	QNAPWPLK	2	QNAPWPLK2	28820.8	32956.4	35737.7
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	QNAQDVLLK	QNAQDVLLK	2	QNAQDVLLK2	36409.3	35894.2	35896.8
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	QNASFLYDTVLPVVER	QNASFLYDTVLPVVER	2	QNASFLYDTVLPVVER2	10495.7	9263.72	11194.8
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	QNASFLYDTVLPVVER	QNASFLYDTVLPVVER	3	QNASFLYDTVLPVVER3	5438.78	12718.4	17854.2
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	QNAVLQAAQDDLGHLR	QNAVLQAAQDDLGHLR	3	QNAVLQAAQDDLGHLR3	4744.54	1498.03	6753.49
Q5XIE4	Q5XIE4	Q5XIE4_RAT	Rchy1	Ring finger and CHY zinc finger domain containing 1	1	QNCPICLEDIHTSR	QNC(UniMod:4)PIC(UniMod:4)LEDIHTSR	3	QNC(UniMod:4)PIC(UniMod:4)LEDIHTSR3	7596.86	4861.48	
D4ADT5	D4ADT5	D4ADT5_RAT	Rig1	RNA helicase	1	QNCSHDWGIFVR	QNC(UniMod:4)SHDWGIFVR	3	QNC(UniMod:4)SHDWGIFVR3	3485.11	6263.43	
F7ETI3	F7ETI3	F7ETI3_RAT	Wdr41	WD repeat domain 41	1	QNDIPVNHFACDEENVFAAVGR	QNDIPVNHFAC(UniMod:4)DEENVFAAVGR	3	QNDIPVNHFAC(UniMod:4)DEENVFAAVGR3	4181.81	4239.45	2835.75
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	QNDLGGCNGTSTMAVIK	QNDLGGC(UniMod:4)NGTSTMAVIK	2	QNDLGGC(UniMod:4)NGTSTMAVIK2	3074.3	648.29	756.226
P50398	P50398	GDIA_RAT	Gdi1	Rab GDP dissociation inhibitor alpha	1	QNDVFGEADQ	QNDVFGEADQ	2	QNDVFGEADQ2	4101.42	2532.64	4359.63
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	QNEEELSTVR	QNEEELSTVR	2	QNEEELSTVR2	18940.8	11258.7	20092.3
Q498C8	Q498C8	RER1_RAT	Rer1	Protein RER1	1	QNEEFRPFIR	QNEEFRPFIR	3	QNEEFRPFIR3	51839.6	103163	97945.5
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	QNEELNLLK	QNEELNLLK	2	QNEELNLLK2	3999.76	2614.05	3144.21
A0A8I5ZS69	A0A8I5ZS69	A0A8I5ZS69_RAT	Snx6	Sorting nexin	1	QNEFSVVR	QNEFSVVR	2	QNEFSVVR2	27404	28718.9	29744.5
P01026	P01026	CO3_RAT	C3	Complement C3	1	QNEGFSLTAK	QNEGFSLTAK	2	QNEGFSLTAK2	991799	873999	753648
D3ZLK1	D3ZLK1	D3ZLK1_RAT	Gcsam	Germinal center-associated, signaling and motility	1	QNEGMTSAPIQDNANETYTEELCYILVDHK	QNEGMTSAPIQDNANETYTEELC(UniMod:4)YILVDHK	4	QNEGMTSAPIQDNANETYTEELC(UniMod:4)YILVDHK4		4613.75	3596.29
D3ZHZ3	D3ZHZ3	D3ZHZ3_RAT	Osbpl3	Oxysterol-binding protein	1	QNEIAMFPR	QNEIAMFPR	2	QNEIAMFPR2	13388.7	15296.8	9833.55
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	QNEQMHALLAIALTMYPMR	QNEQMHALLAIALTMYPMR	3	QNEQMHALLAIALTMYPMR3	7660.24	12866.8	3875.15
F1MAF8	F1MAF8	F1MAF8_RAT	Atg2b	Autophagy related 2B	1	QNEVLPGAK	QNEVLPGAK	2	QNEVLPGAK2	7535.15	4396.7	
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	QNFEDLHCK	QNFEDLHC(UniMod:4)K	2	QNFEDLHC(UniMod:4)K2	3552.96		
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	QNFEDLHCK	QNFEDLHC(UniMod:4)K	3	QNFEDLHC(UniMod:4)K3	32831.9	23130	23091.3
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	QNFEIGNNFAR	QNFEIGNNFAR	2	QNFEIGNNFAR2	26929.8	22167.8	19257.4
O35964	O35964	SH3G1_RAT	Sh3gl1	Endophilin-A2	1	QNFIDPLQNLCDK	QNFIDPLQNLC(UniMod:4)DK	2	QNFIDPLQNLC(UniMod:4)DK2	31645.4	36231	23992.2
O35964	O35964	SH3G1_RAT	Sh3gl1	Endophilin-A2	1	QNFIDPLQNLCDKDLK	QNFIDPLQNLC(UniMod:4)DKDLK	3	QNFIDPLQNLC(UniMod:4)DKDLK3	77792.8	59991.9	77479.1
P05369	A0A8I6A397;A0A8I5ZVV7;P05369	FPPS_RAT	Fdps	Farnesyl pyrophosphate synthase	0	QNFIQHFSQIVK	QNFIQHFSQIVK	3	QNFIQHFSQIVK3	30229.6	25918.2	33066.4
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	QNFNLQLQPYSFGITLSNDLK	QNFNLQLQPYSFGITLSNDLK	3	QNFNLQLQPYSFGITLSNDLK3	100568	141588	79742.8
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	QNGEEGYVPTTYIDVTLEK	QNGEEGYVPTTYIDVTLEK	3	QNGEEGYVPTTYIDVTLEK3	4729.77		
Q6AYG5	Q6AYG5	ECHD1_RAT	Echdc1	Ethylmalonyl-CoA decarboxylase	1	QNGIGILTLNNSNK	QNGIGILTLNNSNK	2	QNGIGILTLNNSNK2	2905.29	3312.62	2050.06
Q08851	Q08851	STX5_RAT	Stx5	Syntaxin-5	1	QNGIQTNKPALHATR	QNGIQTNKPALHATR	4	QNGIQTNKPALHATR4	5220.64	6691.34	5793.39
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	QNGIVLLLPHGMEGMGPEHSSARPER	QNGIVLLLPHGMEGMGPEHSSARPER	4	QNGIVLLLPHGMEGMGPEHSSARPER4	12535.1	12120	15953.6
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	QNGMEDESHEYRPR	QNGMEDESHEYRPR	4	QNGMEDESHEYRPR4	10816.2	11617.8	
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	QNGTDDESYGYRPR	QNGTDDESYGYRPR	3	QNGTDDESYGYRPR3	16313.7	19056.6	22499.5
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	QNGVALTSAPTLAQQVWEALVLLQK	QNGVALTSAPTLAQQVWEALVLLQK	3	QNGVALTSAPTLAQQVWEALVLLQK3	8432.8		
P19234	P19234	NDUV2_RAT	Ndufv2	NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial	1	QNGWLPISAMNK	QNGWLPISAMNK	2	QNGWLPISAMNK2	21768.4	18972.6	
A0A8I6AEZ7	A0A8I6AEZ7	A0A8I6AEZ7_RAT	Crlf3	Cytokine receptor-like factor 3	1	QNGYESLQR	QNGYESLQR	2	QNGYESLQR2	48179.9	55560.1	41898.2
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	QNGYLEFDALSR	QNGYLEFDALSR	2	QNGYLEFDALSR2	10061.9	9087.12	11842.3
D3ZMI0	D3ZMI0	D3ZMI0_RAT	Angptl8	Angiopoietin-like 8	1	QNHLLWALTGHVQR	QNHLLWALTGHVQR	2	QNHLLWALTGHVQR2	3413.7	5412.18	6998.06
D3ZMI0	D3ZMI0	D3ZMI0_RAT	Angptl8	Angiopoietin-like 8	1	QNHLLWALTGHVQR	QNHLLWALTGHVQR	3	QNHLLWALTGHVQR3	24664.3	13980	20755.7
D3ZMI0	D3ZMI0	D3ZMI0_RAT	Angptl8	Angiopoietin-like 8	1	QNHLLWALTGHVQR	QNHLLWALTGHVQR	4	QNHLLWALTGHVQR4	55649.8	83771	116049
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	QNHLQADNFYQTV	QNHLQADNFYQTV	2	QNHLQADNFYQTV2	7444.03	6922.8	8762.34
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	QNHPLPFPPPPALPFYPASVYPR	QNHPLPFPPPPALPFYPASVYPR	3	QNHPLPFPPPPALPFYPASVYPR3	15556.9	22504.5	14287
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	QNHTSSISIAR	QNHTSSISIAR	3	QNHTSSISIAR3	78163.3	75421.1	103505
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	QNIAYEYLCHLEEAK	QNIAYEYLC(UniMod:4)HLEEAK	2	QNIAYEYLC(UniMod:4)HLEEAK2		3633.77	
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	QNIAYEYLCHLEEAK	QNIAYEYLC(UniMod:4)HLEEAK	3	QNIAYEYLC(UniMod:4)HLEEAK3	31458.1	37504.6	39743
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	QNILYHLGEDWQK	QNILYHLGEDWQK	3	QNILYHLGEDWQK3	7594.62	12692	13206.7
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	QNIQDNISLFSLGIGFDVDYDFLK	QNIQDNISLFSLGIGFDVDYDFLK	3	QNIQDNISLFSLGIGFDVDYDFLK3	4242.71	42797.6	80713.8
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	QNIQDNISLFSLGIGFDVDYDFLKR	QNIQDNISLFSLGIGFDVDYDFLKR	3	QNIQDNISLFSLGIGFDVDYDFLKR3	209873	119437	128851
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	QNISDLEK	QNISDLEK	2	QNISDLEK2	71566.6	72357.4	72324.3
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	QNISEIK	QNISEIK	2	QNISEIK2	23826.4	23311.3	26250.3
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QNISPDK	QNISPDK	2	QNISPDK2			19123.1
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QNISPDKIPWSALK	QNISPDKIPWSALK	2	QNISPDKIPWSALK2	9751.31	8325.39	5226.58
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QNISPDKIPWSALK	QNISPDKIPWSALK	3	QNISPDKIPWSALK3	271386	315481	275014
Q91ZQ0	Q91ZQ0	VMP1_RAT	Vmp1	Vacuole membrane protein 1	1	QNIVLWR	QNIVLWR	2	QNIVLWR2	23453.6	8971.9	7793.48
Q6PEB9	Q6PEB9	CC127_RAT	Ccdc127	Coiled-coil domain-containing protein 127	1	QNIYCSLILPR	QNIYC(UniMod:4)SLILPR	2	QNIYC(UniMod:4)SLILPR2	6503.11	8312.13	4201.49
Q3SWS8	Q3SWS8	RAE1L_RAT	Rae1	mRNA export factor	1	QNKPTGFALGSIEGR	QNKPTGFALGSIEGR	3	QNKPTGFALGSIEGR3	12461	13222.7	7863.9
G3V6W5	G3V6W5	G3V6W5_RAT	Ifih1	RNA helicase	1	QNKPTIHLPQILGLTASPGVGAAK	QNKPTIHLPQILGLTASPGVGAAK	4	QNKPTIHLPQILGLTASPGVGAAK4	4380.64	2106.98	10766.2
Q3ZU82	Q3ZU82	GOGA5_RAT	Golga5	Golgin subfamily A member 5	1	QNLAEAVTLAER	QNLAEAVTLAER	2	QNLAEAVTLAER2	10082.1	6244.9	9067.24
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	QNLCDGR	QNLC(UniMod:4)DGR	2	QNLC(UniMod:4)DGR2	12096.4		19119.1
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QNLDGLLNQLK	QNLDGLLNQLK	2	QNLDGLLNQLK2	56764.4	47508.1	51893.2
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QNLDGLLNQLK	QNLDGLLNQLK	3	QNLDGLLNQLK3	1020.24	4800.07	
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	QNLDLLEQLQVANAR	QNLDLLEQLQVANAR	2	QNLDLLEQLQVANAR2	6343.95	5759.61	5782.02
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	QNLDLLEQLQVANAR	QNLDLLEQLQVANAR	3	QNLDLLEQLQVANAR3	1534.46	2282.1	4198.28
Q5FVF9	Q5FVF9	BTD_RAT	Btd	Biotinidase	1	QNLDVYEQQVMAAAQK	QNLDVYEQQVMAAAQK	2	QNLDVYEQQVMAAAQK2	40605.9	31622.9	23186.4
Q5FVF9	Q5FVF9	BTD_RAT	Btd	Biotinidase	1	QNLDVYEQQVMAAAQK	QNLDVYEQQVMAAAQK	3	QNLDVYEQQVMAAAQK3	95079.2	70403.3	76196.1
Q5PQN7	Q5PQN7	LZIC_RAT	Lzic	Protein LZIC	1	QNLEEQLDR	QNLEEQLDR	2	QNLEEQLDR2	17011.6		32021.3
D4A5I4	A0A8I6ANV3;D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	0	QNLEETMSSLR	QNLEETMSSLR	2	QNLEETMSSLR2	4597.5	7382.32	4053.89
A0A8I5ZMI8;A0A8I6G380	A0A8I5ZMI8;A0A8I6G380	A0A8I5ZMI8_RAT;A0A8I6G380_RAT	Krt6a;LOC120093742	Keratin, type II cytoskeletal 6A-like	0	QNLEPLFEQYINNLR	QNLEPLFEQYINNLR	2	QNLEPLFEQYINNLR2	61977.5	45364.6	40469.2
A0A8I5ZMI8;A0A8I6G380	A0A8I5ZMI8;A0A8I6G380	A0A8I5ZMI8_RAT;A0A8I6G380_RAT	Krt6a;LOC120093742	Keratin, type II cytoskeletal 6A-like	0	QNLEPLFEQYINNLR	QNLEPLFEQYINNLR	3	QNLEPLFEQYINNLR3	51076.5	36940.3	37360.2
A0A8I5ZMI8;A0A8I6G380	A0A8I5ZMI8;A0A8I6G380	A0A8I5ZMI8_RAT;A0A8I6G380_RAT	Krt6a;LOC120093742	Keratin, type II cytoskeletal 6A-like	0	QNLEPLFEQYINNLRR	QNLEPLFEQYINNLRR	3	QNLEPLFEQYINNLRR3	62776.5	83500.8	56615.9
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	QNLESFIK	QNLESFIK	2	QNLESFIK2	16615.2	20825.5	14409.4
Q63798	Q63798	PSME2_RAT	Psme2	Proteasome activator complex subunit 2	1	QNLFQEAEDFLCTFLPR	QNLFQEAEDFLC(UniMod:4)TFLPR	3	QNLFQEAEDFLC(UniMod:4)TFLPR3	1441.76		
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	QNLFSFDSEVQR	QNLFSFDSEVQR	2	QNLFSFDSEVQR2	24057	19038.7	11378.1
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QNLFTTWSHHLQQANIQFR	QNLFTTWSHHLQQANIQFR	3	QNLFTTWSHHLQQANIQFR3	19469.1	17924.5	34173.5
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QNLFTTWSHHLQQANIQFR	QNLFTTWSHHLQQANIQFR	4	QNLFTTWSHHLQQANIQFR4	49826.9	69975.8	75500.5
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	QNLGEASWLDWQR	QNLGEASWLDWQR	2	QNLGEASWLDWQR2	63727.5	49085.5	58968.3
P08721	P08721	OSTP_RAT	Spp1	Osteopontin	1	QNLLAPQNSVSSEETDDFK	QNLLAPQNSVSSEETDDFK	3	QNLLAPQNSVSSEETDDFK3	23502.9	25059.1	27821.5
Q9Z2Q7	Q9Z2Q7	STX8_RAT	Stx8	Syntaxin-8	1	QNLLDDLVTR	QNLLDDLVTR	2	QNLLDDLVTR2	30816.4	29644.6	22823.3
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	QNLLHSEK	QNLLHSEK	2	QNLLHSEK2	9071.01	3968.01	4652.31
Q6AXQ8	Q6AXQ8	MNS1_RAT	Mns1	Meiosis-specific nuclear structural protein 1	1	QNLLIQK	QNLLIQK	1	QNLLIQK1	131728	151703	134444
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	QNLLSQSHAYQQFLR	QNLLSQSHAYQQFLR	2	QNLLSQSHAYQQFLR2	26326.8	45322.3	93759.6
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	QNLLSQSHAYQQFLR	QNLLSQSHAYQQFLR	3	QNLLSQSHAYQQFLR3	246856	264018	271283
A0A8I5ZQQ5	A0A8I5ZQQ5	A0A8I5ZQQ5_RAT	Smarca5	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	1	QNLLSVGDYR	QNLLSVGDYR	2	QNLLSVGDYR2	8570.37	10821	11588.8
Q4V7A5	Q4V7A5	CK024_RAT		Uncharacterized protein C11orf24 homolog	1	QNLSGDAVPR	QNLSGDAVPR	2	QNLSGDAVPR2	28787.7	25629.9	23182.5
Q8VHC1	Q8VHC1	Q8VHC1_RAT	Cst6	Cystatin E/M	1	QNLSPDDPR	QNLSPDDPR	2	QNLSPDDPR2	38204.6	22138.8	40797.1
D4ACD2	D4ACD2	D4ACD2_RAT	Bach1	BTB domain and CNC homolog 1	1	QNLTGLCQQVCK	QNLTGLC(UniMod:4)QQVC(UniMod:4)K	2	QNLTGLC(UniMod:4)QQVC(UniMod:4)K2	4310.48	5107.43	2076.74
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	QNNICFDNWWVDEYHTQADHSAAR	QNNIC(UniMod:4)FDNWWVDEYHTQADHSAAR	4	QNNIC(UniMod:4)FDNWWVDEYHTQADHSAAR4	2.1369e+06	2.14188e+06	1.8775e+06
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	QNPATQNAPR	QNPATQNAPR	2	QNPATQNAPR2	4470.29		10207
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	QNPEFPWSGVQAEIFK	QNPEFPWSGVQAEIFK	2	QNPEFPWSGVQAEIFK2	14367.5	9213.6	
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	QNPLLAEAYSNLGNVYK	QNPLLAEAYSNLGNVYK	2	QNPLLAEAYSNLGNVYK2	2429.68	11700.4	
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	QNPLLAEAYSNLGNVYK	QNPLLAEAYSNLGNVYK	3	QNPLLAEAYSNLGNVYK3	6239.17		4311.41
P31720	P31720	C1QA_RAT	C1qa	Complement C1q subcomponent subunit A	1	QNPPTYGNVVVFDK	QNPPTYGNVVVFDK	2	QNPPTYGNVVVFDK2	100071	80555.1	74235.6
F7EYC4	F7EYC4	F7EYC4_RAT	Tom1	Target of myb1 membrane trafficking protein	1	QNPVVSNSSHR	QNPVVSNSSHR	2	QNPVVSNSSHR2	6518.54		4872.23
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	QNQGAAPEIQALK	QNQGAAPEIQALK	2	QNQGAAPEIQALK2	24815.1	26210.5	25563.1
F1LQ09	F1LQ09	F1LQ09_RAT	Atl2	Atlastin GTPase 2	1	QNQHEELQNVR	QNQHEELQNVR	2	QNQHEELQNVR2		3743.26	
F1LQ09	F1LQ09	F1LQ09_RAT	Atl2	Atlastin GTPase 2	1	QNQHEELQNVR	QNQHEELQNVR	3	QNQHEELQNVR3	73775.4	73237.1	74163.6
A0A0G2K1A2	A0A0G2K1A2	A0A0G2K1A2_RAT	Mpo	Myeloperoxidase	1	QNQIAVDEIR	QNQIAVDEIR	2	QNQIAVDEIR2	31831.8	30680.2	17868.9
G3V6U9	G3V6U9	SETD3_RAT	Setd3	Actin-histidine N-methyltransferase	1	QNQIPTEDGSR	QNQIPTEDGSR	2	QNQIPTEDGSR2	26630.6	25019	16614.6
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	QNQNFPAAQQGCPR	QNQNFPAAQQGC(UniMod:4)PR	2	QNQNFPAAQQGC(UniMod:4)PR2	60679.5	55383.2	56657.1
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	QNQNFPAAQQGCPR	QNQNFPAAQQGC(UniMod:4)PR	3	QNQNFPAAQQGC(UniMod:4)PR3	14290.8	11045.3	12462
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	QNQVEFEGLK	QNQVEFEGLK	2	QNQVEFEGLK2	14888.1	6170.31	14703.4
D3ZG43	D3ZG43	D3ZG43_RAT	Ndufs3	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial	1	QNRFEIVYNLLSLR	QNRFEIVYNLLSLR	3	QNRFEIVYNLLSLR3	3030.43	3116.57	5520.16
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	QNRPGGLDK	QNRPGGLDK	2	QNRPGGLDK2			9820.38
P62893	P62893	RL39_RAT	Rpl39	Large ribosomal subunit protein eL39	1	QNRPIPQWIR	QNRPIPQWIR	3	QNRPIPQWIR3	11740	16714.9	6322.44
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	QNSATESADSIEIYVPEAQTR	QNSATESADSIEIYVPEAQTR	3	QNSATESADSIEIYVPEAQTR3		13627.8	19355.1
O70601	O70601	LAT_RAT	Lat	Linker for activation of T-cells family member 1	1	QNSDDANSVASYENQEPAR	QNSDDANSVASYENQEPAR	3	QNSDDANSVASYENQEPAR3	2721.07	1582.34	2484.19
O70601	O70601	LAT_RAT	Lat	Linker for activation of T-cells family member 1	1	QNSDDANSVASYENQEPARK	QNSDDANSVASYENQEPARK	3	QNSDDANSVASYENQEPARK3	2386.03	2958.33	10494.6
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	QNSDPTSENPPLPTR	QNSDPTSENPPLPTR	2	QNSDPTSENPPLPTR2	236235	212251	204263
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	QNSDPTSENPPLPTR	QNSDPTSENPPLPTR	3	QNSDPTSENPPLPTR3	54167.4	38019.9	65177.2
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	QNSSAPTALALTSASR	QNSSAPTALALTSASR	2	QNSSAPTALALTSASR2	26603.5	37883.5	26790.5
Q99N37	Q99N37	RHG17_RAT	Arhgap17	Rho GTPase-activating protein 17	1	QNSSQSETTQLHGTLPR	QNSSQSETTQLHGTLPR	3	QNSSQSETTQLHGTLPR3	7222.33	7713.26	5052.97
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	QNSTTTGVSVIMNTALDK	QNSTTTGVSVIMNTALDK	3	QNSTTTGVSVIMNTALDK3		4367.71	2383.24
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	QNSTTTGVSVIMNTALDKEGQVFCSK	QNSTTTGVSVIMNTALDKEGQVFC(UniMod:4)SK	3	QNSTTTGVSVIMNTALDKEGQVFC(UniMod:4)SK3	727.861	8723.13	13696.3
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	QNTDIVDEDPYAIQIISWCPESR	QNTDIVDEDPYAIQIISWC(UniMod:4)PESR	3	QNTDIVDEDPYAIQIISWC(UniMod:4)PESR3	6604.76	9992.12	
Q4V884	Q4V884	Q4V884_RAT	Cdc16	CDC16 cell division cycle 16 homolog (S. cerevisiae)	1	QNTEEAGLAPLENATK	QNTEEAGLAPLENATK	2	QNTEEAGLAPLENATK2	15513.1	13125.3	12673
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	QNTKPNIYDTPK	QNTKPNIYDTPK	2	QNTKPNIYDTPK2	14047.7	15174.4	12844.8
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	QNTKPNIYDTPK	QNTKPNIYDTPK	3	QNTKPNIYDTPK3	111239	113997	105048
A0A8I6AGG9	A0A8I6AGG9	A0A8I6AGG9_RAT	Chchd3	Coiled-coil-helix-coiled-coil-helix domain containing 3	1	QNTQQTLSCSALANQYMHCVNHAK	QNTQQTLSC(UniMod:4)SALANQYMHC(UniMod:4)VNHAK	3	QNTQQTLSC(UniMod:4)SALANQYMHC(UniMod:4)VNHAK3	3342.45	6189.01	3323.4
A0A8I6AGG9	A0A8I6AGG9	A0A8I6AGG9_RAT	Chchd3	Coiled-coil-helix-coiled-coil-helix domain containing 3	1	QNTQQTLSCSALANQYMHCVNHAK	QNTQQTLSC(UniMod:4)SALANQYMHC(UniMod:4)VNHAK	4	QNTQQTLSC(UniMod:4)SALANQYMHC(UniMod:4)VNHAK4	24627.4	29576	39310.1
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	QNTTLGVTQLTER	QNTTLGVTQLTER	2	QNTTLGVTQLTER2	3985.73	3107.76	
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	QNTTLGVTQLTERPACVK	QNTTLGVTQLTERPAC(UniMod:4)VK	3	QNTTLGVTQLTERPAC(UniMod:4)VK3	32203.4	25054.9	25280.8
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	QNTYCFPHSLR	QNTYC(UniMod:4)FPHSLR	3	QNTYC(UniMod:4)FPHSLR3	13082.9	23898.9	25947.7
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	QNVAYEYLCHLEEAK	QNVAYEYLC(UniMod:4)HLEEAK	2	QNVAYEYLC(UniMod:4)HLEEAK2		2635.57	6825.67
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	QNVAYEYLCHLEEAK	QNVAYEYLC(UniMod:4)HLEEAK	3	QNVAYEYLC(UniMod:4)HLEEAK3	34015.4	33374.3	38400
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	QNVAYEYLCHLEEAKR	QNVAYEYLC(UniMod:4)HLEEAKR	4	QNVAYEYLC(UniMod:4)HLEEAKR4	5587.9	2638.75	5233.03
A0A0G2K1G4	A0A0G2K1G4	A0A0G2K1G4_RAT	Rspry1	Ring finger and SPRY domain containing 1	1	QNVDGLVLDTLAVIR	QNVDGLVLDTLAVIR	2	QNVDGLVLDTLAVIR2	1799.18	464.595	
O55145	O55145	X3CL1_RAT	Cx3cl1	Fractalkine	1	QNVGSEGQPPWVQEQDSTPEK	QNVGSEGQPPWVQEQDSTPEK	3	QNVGSEGQPPWVQEQDSTPEK3	24200.7	19298.9	21538.9
Q6AYB5	Q6AYB5	SRP54_RAT	Srp54	Signal recognition particle subunit SRP54	1	QNVIMFVGLQGSGK	QNVIMFVGLQGSGK	2	QNVIMFVGLQGSGK2	3315.7	6942	2237.59
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	QNVPIIR	QNVPIIR	2	QNVPIIR2	24502.8	24305.6	14813.6
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	QNVQFMHNR	QNVQFMHNR	2	QNVQFMHNR2	11835.6	11115	5646.5
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	QNVQFMHNR	QNVQFMHNR	3	QNVQFMHNR3	59217.7	48544.5	52651.7
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	QNVVNDYAK	QNVVNDYAK	2	QNVVNDYAK2	15150.8	16259.4	24407.9
B5DEI0	B5DEI0	B5DEI0_RAT	Pcyox1l	Pcyox1l protein	1	QNYESGAASFHSLSLHMQDFVK	QNYESGAASFHSLSLHMQDFVK	3	QNYESGAASFHSLSLHMQDFVK3			10756.2
B5DEI0	B5DEI0	B5DEI0_RAT	Pcyox1l	Pcyox1l protein	1	QNYESGAASFHSLSLHMQDFVK	QNYESGAASFHSLSLHMQDFVK	4	QNYESGAASFHSLSLHMQDFVK4	8055.99	4865.54	9616.43
P19132	A0A8I5ZU81;P19132;A0A8I5ZZJ3	FRIH_RAT	Fth1	Ferritin heavy chain	0	QNYHQDSEAAINR	QNYHQDSEAAINR	3	QNYHQDSEAAINR3	5923.55		7050.75
Q5PQZ9	Q5PQZ9	Q5PQZ9_RAT	Ndufc2	NADH dehydrogenase [ubiquinone] 1 subunit C2	1	QNYLYAVR	QNYLYAVR	2	QNYLYAVR2	11150.8	11222.6	7405.17
P58751	P58751	RELN_RAT	Reln	Reelin	1	QNYMMNFSR	QNYMMNFSR	2	QNYMMNFSR2	7619.48	8460.08	10239
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	QNYQIGK	QNYQIGK	1	QNYQIGK1		2577.36	
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	QNYQIGK	QNYQIGK	2	QNYQIGK2	29353.5	35334.2	23353.1
Q7TP54	P02793;A0A8I6GIG4;D4ADM5;M0RCS3;M0R5T8;Q7TP54;F1M5T1;M0R6L9;A0A8L2QVZ0	RIPR2_RAT	Ripor2	Rho family-interacting cell polarization regulator 2	0	QNYSTEVEAAVNR	QNYSTEVEAAVNR	2	QNYSTEVEAAVNR2	5416.25	5049.64	4661.42
Q5XIC0	Q5XIC0	ECI2_RAT	Eci2	Enoyl-CoA delta isomerase 2	1	QNYVDLVSSLSSSSEASSQGK	QNYVDLVSSLSSSSEASSQGK	3	QNYVDLVSSLSSSSEASSQGK3	5542.68		6372.87
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	QPAAEHSLELAK	QPAAEHSLELAK	2	QPAAEHSLELAK2	7664.11	5746.94	3860.01
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	QPAAEHSLELAK	QPAAEHSLELAK	3	QPAAEHSLELAK3	139745	183475	152594
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	QPAENVNQYLTDSK	QPAENVNQYLTDSK	2	QPAENVNQYLTDSK2	68423.5	53297.2	36315.7
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	QPAINYSVYGQAAQVR	QPAINYSVYGQAAQVR	2	QPAINYSVYGQAAQVR2	3481.37	6298.66	5178.19
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	QPAKPGMICQLGCR	QPAKPGMIC(UniMod:4)QLGC(UniMod:4)R	3	QPAKPGMIC(UniMod:4)QLGC(UniMod:4)R3	67666.6	69990.7	71300
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	QPANIYAR	QPANIYAR	2	QPANIYAR2	125755	107847	63392
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	QPAPATHSAPTIK	QPAPATHSAPTIK	3	QPAPATHSAPTIK3	9514.2	11748.7	8685.37
P01026	P01026	CO3_RAT	C3	Complement C3	1	QPAPGHQTTLR	QPAPGHQTTLR	2	QPAPGHQTTLR2	70220.3	90142.8	51732.8
P01026	P01026	CO3_RAT	C3	Complement C3	1	QPAPGHQTTLR	QPAPGHQTTLR	3	QPAPGHQTTLR3	1.61554e+06	1.09498e+06	1.07083e+06
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	QPAPTTSGGLNK	QPAPTTSGGLNK	2	QPAPTTSGGLNK2	20304	23147.7	27920.1
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	QPASLHGSTELLPLSR	QPASLHGSTELLPLSR	3	QPASLHGSTELLPLSR3	10868.5	5327.65	10833.2
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	QPCIFGDK	QPC(UniMod:4)IFGDK	2	QPC(UniMod:4)IFGDK2	47467.2	38211.9	40638.1
Q5FVF9	Q5FVF9	BTD_RAT	Btd	Biotinidase	1	QPCLGSDPGCPQDGR	QPC(UniMod:4)LGSDPGC(UniMod:4)PQDGR	2	QPC(UniMod:4)LGSDPGC(UniMod:4)PQDGR2	68972.9	56447.3	59415.1
Q5FVF9	Q5FVF9	BTD_RAT	Btd	Biotinidase	1	QPCLGSDPGCPQDGR	QPC(UniMod:4)LGSDPGC(UniMod:4)PQDGR	3	QPC(UniMod:4)LGSDPGC(UniMod:4)PQDGR3	18309.7	14324.8	6499.7
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	QPCMPMHPDRPLVIK	QPC(UniMod:4)MPMHPDRPLVIK	4	QPC(UniMod:4)MPMHPDRPLVIK4	14163.9	19580.7	10016.5
Q5RJR2	Q5RJR2;A0A8I6GGS8	TWF1_RAT	Twf1	Twinfilin-1	0	QPCYVLFR	QPC(UniMod:4)YVLFR	2	QPC(UniMod:4)YVLFR2	8026.71		5916.64
D4A0G7	D4A0G7	D4A0G7_RAT	Rab37	RAB37, member RAS oncogene family	1	QPDEPSFQIR	QPDEPSFQIR	2	QPDEPSFQIR2	80428.5	86769.3	50806.3
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	QPDFISFGLVGGRPEFR	QPDFISFGLVGGRPEFR	3	QPDFISFGLVGGRPEFR3	26377.3	33318	20124.8
O70601	O70601	LAT_RAT	Lat	Linker for activation of T-cells family member 1	1	QPDLLPIPR	QPDLLPIPR	2	QPDLLPIPR2	124917	110589	111300
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	QPDPDENKPLDDK	QPDPDENKPLDDK	3	QPDPDENKPLDDK3	58456	40887.8	58298.6
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	QPDPDENKPLDDKVK	QPDPDENKPLDDKVK	4	QPDPDENKPLDDKVK4	5953.19	4984.41	4093.14
E9PU37	E9PU37	E9PU37_RAT	Zdhhc13	Palmitoyltransferase	1	QPDRENVSLLHWAAINNR	QPDRENVSLLHWAAINNR	4	QPDRENVSLLHWAAINNR4	6611.92	7993.7	10825.3
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	QPDSGISSIR	QPDSGISSIR	2	QPDSGISSIR2	155122	135829	159710
A0A0G2QC33	A0A0G2QC33	ATG4B_RAT	Atg4b	Cysteine protease ATG4B	1	QPDSYFSVLNAFLDRK	QPDSYFSVLNAFLDRK	3	QPDSYFSVLNAFLDRK3	6654.02		8188.23
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QPDVILEASGPEAIQIR	QPDVILEASGPEAIQIR	2	QPDVILEASGPEAIQIR2	22884.9	29933.3	22380.7
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QPDVILEASGPEAIQIR	QPDVILEASGPEAIQIR	3	QPDVILEASGPEAIQIR3	23235.6	37324.2	28620.1
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	QPDVPNHPCK	QPDVPNHPC(UniMod:4)K	3	QPDVPNHPC(UniMod:4)K3	36009.5	25071.1	27731.1
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	QPEEDEEELAR	QPEEDEEELAR	2	QPEEDEEELAR2	12044.7	7042.84	8231.42
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	QPEEDFQCIVYFWQGR	QPEEDFQC(UniMod:4)IVYFWQGR	3	QPEEDFQC(UniMod:4)IVYFWQGR3	5491.42		6307.18
O54748	O54748;A0A8I6A0F8	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	0	QPEEVFDVLEK	QPEEVFDVLEK	2	QPEEVFDVLEK2	103248	80022.9	95618.3
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	QPEGAAAGEEPPSGDK	QPEGAAAGEEPPSGDK	2	QPEGAAAGEEPPSGDK2	14673.8	10628.9	11106.5
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	QPEGTGMIDEEFTVAR	QPEGTGMIDEEFTVAR	2	QPEGTGMIDEEFTVAR2	26571	17689	22162.8
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	QPEGTPLNHFR	QPEGTPLNHFR	3	QPEGTPLNHFR3	6262	14960.9	
Q6P6Q9	Q6P6Q9	MICU1_RAT	Micu1	Calcium uptake protein 1, mitochondrial	1	QPEHLGLDQYIIK	QPEHLGLDQYIIK	3	QPEHLGLDQYIIK3	15787.4	13708.9	15638.7
Q4V8A2	Q4V8A2	CDC27_RAT	Cdc27	Cell division cycle protein 27 homolog	1	QPETVLTETPQDTIELNR	QPETVLTETPQDTIELNR	3	QPETVLTETPQDTIELNR3	1632.52	3422.85	4880.57
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	QPEVTNPCDR	QPEVTNPC(UniMod:4)DR	2	QPEVTNPC(UniMod:4)DR2	35401.4	32451.7	32790.5
P01015	P01015	ANGT_RAT	Agt	Angiotensinogen	1	QPFVESLGPFTPAIFPR	QPFVESLGPFTPAIFPR	2	QPFVESLGPFTPAIFPR2	30020.3	25117.1	27863.7
P01015	P01015	ANGT_RAT	Agt	Angiotensinogen	1	QPFVESLGPFTPAIFPR	QPFVESLGPFTPAIFPR	3	QPFVESLGPFTPAIFPR3	45821	43710.6	47651.4
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	QPGCSQCLCQDGEVTCGEVR	QPGC(UniMod:4)SQC(UniMod:4)LC(UniMod:4)QDGEVTC(UniMod:4)GEVR	3	QPGC(UniMod:4)SQC(UniMod:4)LC(UniMod:4)QDGEVTC(UniMod:4)GEVR3	38200.7	46323.1	40872.6
Q99MC0	Q99MC0	PP14A_RAT	Ppp1r14a	Protein phosphatase 1 regulatory subunit 14A	1	QPGFPQPSPSDDPSLSPR	QPGFPQPSPSDDPSLSPR	2	QPGFPQPSPSDDPSLSPR2	20677.2	15131.5	17698.2
Q99MC0	Q99MC0	PP14A_RAT	Ppp1r14a	Protein phosphatase 1 regulatory subunit 14A	1	QPGFPQPSPSDDPSLSPR	QPGFPQPSPSDDPSLSPR	3	QPGFPQPSPSDDPSLSPR3	14220.3	8175.98	14455.3
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	QPGGGIADTRPIGVSQK	QPGGGIADTRPIGVSQK	3	QPGGGIADTRPIGVSQK3	38322	34587.3	22474
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	QPGRFDEVLIR	QPGRFDEVLIR	3	QPGRFDEVLIR3	20733	28581.7	36984.3
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	QPGTDGEGEEEAR	QPGTDGEGEEEAR	2	QPGTDGEGEEEAR2			8030.15
P24268	P24268	CATD_RAT	Ctsd	Cathepsin D	1	QPGVVFIAAK	QPGVVFIAAK	2	QPGVVFIAAK2	83164.3	83108.3	85486
Q63797	A0A0G2JVP9;Q63797	PSME1_RAT	Psme1	Proteasome activator complex subunit 1	0	QPHVGDYR	QPHVGDYR	2	QPHVGDYR2	11000.4	6990	8768.56
Q99P39	Q99P39	NFS1_RAT	Nfs1	Cysteine desulfurase	1	QPIAEIGQICSSR	QPIAEIGQIC(UniMod:4)SSR	2	QPIAEIGQIC(UniMod:4)SSR2	4431.23	3586.57	1854.73
P07867	P07867	LIPC_RAT	Lipc	Hepatic triacylglycerol lipase	1	QPIAHYDFYPNGGSFQPGCHFLELYK	QPIAHYDFYPNGGSFQPGC(UniMod:4)HFLELYK	4	QPIAHYDFYPNGGSFQPGC(UniMod:4)HFLELYK4		12176.8	11945.4
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	QPIAVSSMPQQIGVPTSSLTQVVHSAGR	QPIAVSSMPQQIGVPTSSLTQVVHSAGR	3	QPIAVSSMPQQIGVPTSSLTQVVHSAGR3	4153.47	3723.38	6428.15
A0A8I6ACU6	A0A8I6ACU6	A0A8I6ACU6_RAT	Glcci1	Glucocorticoid induced 1	1	QPISAPLFSCPDK	QPISAPLFSC(UniMod:4)PDK	2	QPISAPLFSC(UniMod:4)PDK2	5543.65	9155.05	
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	QPISTQR	QPISTQR	2	QPISTQR2			12196.7
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	QPITVHEGQNICVR	QPITVHEGQNIC(UniMod:4)VR	3	QPITVHEGQNIC(UniMod:4)VR3	32371.9		27389.2
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	QPLDLIR	QPLDLIR	2	QPLDLIR2	70569.6	46516.9	48595.7
Q6P7B4	Q6P7B4	GAK1B_RAT	Gask1b	Golgi-associated kinase 1B	1	QPLDMSEVFAFHLDR	QPLDMSEVFAFHLDR	3	QPLDMSEVFAFHLDR3	1713.93	9213.06	
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	QPLLGPPESMR	QPLLGPPESMR	2	QPLLGPPESMR2	159171	115653	118747
Q8CHM7	Q8CHM7	HACL1_RAT	Hacl1	2-hydroxyacyl-CoA lyase 1	1	QPLLIIGK	QPLLIIGK	2	QPLLIIGK2	7961.86	6791.4	7081.44
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	QPLLLDDR	QPLLLDDR	2	QPLLLDDR2	138893	125159	103865
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	QPLLLSEDEEDTK	QPLLLSEDEEDTK	2	QPLLLSEDEEDTK2	6797.13	6523.65	6091.41
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	QPLLQINDSNILGEK	QPLLQINDSNILGEK	2	QPLLQINDSNILGEK2		6115.59	
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	QPLNTTR	QPLNTTR	2	QPLNTTR2	150827	136031	
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	QPLSANTLSDVLSR	QPLSANTLSDVLSR	2	QPLSANTLSDVLSR2	4590.61	4546.58	1702.15
Q6AZ50	Q6AZ50	ATG3_RAT	Atg3	Ubiquitin-like-conjugating enzyme ATG3	1	QPLTVEHMYEDISQDHVK	QPLTVEHMYEDISQDHVK	3	QPLTVEHMYEDISQDHVK3	4444.5		10391.5
Q6AZ50	Q6AZ50	ATG3_RAT	Atg3	Ubiquitin-like-conjugating enzyme ATG3	1	QPLTVEHMYEDISQDHVK	QPLTVEHMYEDISQDHVK	4	QPLTVEHMYEDISQDHVK4	47607		
Q6AZ50	Q6AZ50	ATG3_RAT	Atg3	Ubiquitin-like-conjugating enzyme ATG3	1	QPLTVEHMYEDISQDHVKK	QPLTVEHMYEDISQDHVKK	4	QPLTVEHMYEDISQDHVKK4	8504.79		3742.96
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	QPLTVIVTPMSK	QPLTVIVTPMSK	2	QPLTVIVTPMSK2	6796.47	2939.01	6731.17
Q63377	Q63377	AT1B3_RAT	Atp1b3	Sodium/potassium-transporting ATPase subunit beta-3	1	QPLVAVQVIFGADATK	QPLVAVQVIFGADATK	2	QPLVAVQVIFGADATK2	2604.14	8161.25	14610.5
Q63377	Q63377	AT1B3_RAT	Atp1b3	Sodium/potassium-transporting ATPase subunit beta-3	1	QPLVAVQVIFGADATK	QPLVAVQVIFGADATK	3	QPLVAVQVIFGADATK3	5855.81	8160.73	8579.65
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	QPLVVLQGNNIVLEHHASR	QPLVVLQGNNIVLEHHASR	3	QPLVVLQGNNIVLEHHASR3	3132.77	3462.19	
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	QPLVVLQGNNIVLEHHASR	QPLVVLQGNNIVLEHHASR	4	QPLVVLQGNNIVLEHHASR4	42122.1	47653.1	25784.1
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	QPLWNHLLSYYK	QPLWNHLLSYYK	3	QPLWNHLLSYYK3	8646.9	12158	10671.7
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	QPLYEFEDCLGGGKPK	QPLYEFEDC(UniMod:4)LGGGKPK	3	QPLYEFEDC(UniMod:4)LGGGKPK3	5572.39	11315.9	6970.12
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	QPMAPNPCEANGGR	QPMAPNPC(UniMod:4)EANGGR	2	QPMAPNPC(UniMod:4)EANGGR2	135681	175365	152611
M0R3L8	M0R3L8	M0R3L8_RAT	Gba	Glucosylceramidase	1	QPMFYHLGHFSK	QPMFYHLGHFSK	3	QPMFYHLGHFSK3	8854.86	8023.46	8770.79
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	QPMILEK	QPMILEK	2	QPMILEK2	51043.7	57116.9	53900.5
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	QPMTVICQK	QPMTVIC(UniMod:4)QK	2	QPMTVIC(UniMod:4)QK2	1.28432e+07	1.48211e+07	1.42049e+07
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	QPNAQPQYLHGSK	QPNAQPQYLHGSK	3	QPNAQPQYLHGSK3	10531.2	16982.6	11905.7
Q76LD0	Q76LD0	CRDL1_RAT	Chrdl1	Chordin-like protein 1	1	QPNQCSQCSCSEGNVYCGLK	QPNQC(UniMod:4)SQC(UniMod:4)SC(UniMod:4)SEGNVYC(UniMod:4)GLK	3	QPNQC(UniMod:4)SQC(UniMod:4)SC(UniMod:4)SEGNVYC(UniMod:4)GLK3	12968.4	8463.7	9103.33
P61131	P61131	SIA4C_RAT	St3gal4	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4	1	QPPLIWDVNPK	QPPLIWDVNPK	2	QPPLIWDVNPK2	9560.02	2271.82	2331.54
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	QPPLTLELVPNHTDSLNSSQR	QPPLTLELVPNHTDSLNSSQR	3	QPPLTLELVPNHTDSLNSSQR3	5373.24	9548.15	3087.18
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	QPPLVTGISPNEGIPWTK	QPPLVTGISPNEGIPWTK	2	QPPLVTGISPNEGIPWTK2	3398.79	3819.29	4810.9
A0A8I5ZPZ9	A0A8I5ZPZ9	A0A8I5ZPZ9_RAT	Ptpa	Serine/threonine-protein phosphatase 2A activator	1	QPPPDSSEETPSATPTFIIPK	QPPPDSSEETPSATPTFIIPK	3	QPPPDSSEETPSATPTFIIPK3	4395.24	8439.58	3921.56
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	QPPPGIVAPAAMLSCR	QPPPGIVAPAAMLSC(UniMod:4)R	2	QPPPGIVAPAAMLSC(UniMod:4)R2	25490.3	28744	24065
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	QPPPGIVAPAAMLSCR	QPPPGIVAPAAMLSC(UniMod:4)R	3	QPPPGIVAPAAMLSC(UniMod:4)R3	5925.29	3705.01	4973.98
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	QPPQMSQKPSFVTFR	QPPQMSQKPSFVTFR	3	QPPQMSQKPSFVTFR3	64643.4	61284.5	53272.6
P52632	A0A0G2K2M3;P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	QPPQVLK	QPPQVLK	2	QPPQVLK2	22405	24554	22086.4
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	QPPTAAGRPVDASPR	QPPTAAGRPVDASPR	3	QPPTAAGRPVDASPR3	99165.3	117231	115569
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	QPPYYSCR	QPPYYSC(UniMod:4)R	2	QPPYYSC(UniMod:4)R2	52115	50985.4	52860.1
B5DEI0	B5DEI0	B5DEI0_RAT	Pcyox1l	Pcyox1l protein	1	QPQEAAVWR	QPQEAAVWR	2	QPQEAAVWR2	5730.49		7661.81
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	QPQGGASGLGGR	QPQGGASGLGGR	2	QPQGGASGLGGR2	184567	187525	165822
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QPQGHLLLIGVSGAGK	QPQGHLLLIGVSGAGK	2	QPQGHLLLIGVSGAGK2	1940.89	2284.82	
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QPQGHLLLIGVSGAGK	QPQGHLLLIGVSGAGK	3	QPQGHLLLIGVSGAGK3	56277	66140	55432
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	QPQSWKDHFIDGFISLGAPWGGSIKPMR	QPQSWKDHFIDGFISLGAPWGGSIKPMR	4	QPQSWKDHFIDGFISLGAPWGGSIKPMR4	3909.51	8983.08	3696.16
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QPQTSLPGTEQFSGACLEK	QPQTSLPGTEQFSGAC(UniMod:4)LEK	3	QPQTSLPGTEQFSGAC(UniMod:4)LEK3	15467.7	12180.1	10128.9
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	QPSATSSKPVTLFEQYCSGGNPFEIQADHK	QPSATSSKPVTLFEQYC(UniMod:4)SGGNPFEIQADHK	4	QPSATSSKPVTLFEQYC(UniMod:4)SGGNPFEIQADHK4	6850.6	8954.69	2810.35
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	QPSDLPGIVAVR	QPSDLPGIVAVR	2	QPSDLPGIVAVR2	118269	86130.3	119440
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	QPSDLPGIVAVR	QPSDLPGIVAVR	3	QPSDLPGIVAVR3	15258.7	9387.86	19699.5
P51111	P51111	HD_RAT	Htt	Huntingtin	1	QPSDSSVDK	QPSDSSVDK	2	QPSDSSVDK2			6599.44
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	QPSGAGLCDITEGTVVPEDR	QPSGAGLC(UniMod:4)DITEGTVVPEDR	3	QPSGAGLC(UniMod:4)DITEGTVVPEDR3	6381.73	9735.2	10507.5
A0A8I6AEL0	A0A8I6AEL0;F1LUY7	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	0	QPSLFYHLGVR	QPSLFYHLGVR	3	QPSLFYHLGVR3	8689.73	4804.19	10731.1
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	QPSLSAACLGPEVTTQYGGLYR	QPSLSAAC(UniMod:4)LGPEVTTQYGGLYR	3	QPSLSAAC(UniMod:4)LGPEVTTQYGGLYR3	28540.6	35596.2	47042.3
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	QPSQCKETDWPFCSDEDWNHK	QPSQC(UniMod:4)KETDWPFC(UniMod:4)SDEDWNHK	4	QPSQC(UniMod:4)KETDWPFC(UniMod:4)SDEDWNHK4	2247	6017.55	2877.86
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	QPSQGPTFGIK	QPSQGPTFGIK	2	QPSQGPTFGIK2	7174.31	8098.63	8050.18
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	QPSQGPTFGVK	QPSQGPTFGVK	2	QPSQGPTFGVK2	10948.2	4912.83	13552.4
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	QPTALFQR	QPTALFQR	2	QPTALFQR2	20586.5	36312.9	28617.9
P05696	P68403;P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	0	QPTFCSHCTDFIWGFGK	QPTFC(UniMod:4)SHC(UniMod:4)TDFIWGFGK	3	QPTFC(UniMod:4)SHC(UniMod:4)TDFIWGFGK3	126785	132502	141715
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	QPTQNQEPTPLAGSSQFR	QPTQNQEPTPLAGSSQFR	3	QPTQNQEPTPLAGSSQFR3	34151.6	37055.5	36008.9
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	QPTVTSVCSESAQELAEGQR	QPTVTSVC(UniMod:4)SESAQELAEGQR	3	QPTVTSVC(UniMod:4)SESAQELAEGQR3	36100.5	58341.2	16707.4
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	QPVAGSEGAQYR	QPVAGSEGAQYR	2	QPVAGSEGAQYR2	22923.8	24017.7	15678.4
Q8R478	Q8R478	WBP2_RAT	Wbp2	WW domain-binding protein 2	1	QPVFGANFIK	QPVFGANFIK	2	QPVFGANFIK2	48922.2	41177.1	38899.6
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	QPVFISQVVTEK	QPVFISQVVTEK	2	QPVFISQVVTEK2	12782.7	3541.99	8829.72
B5DFF2	B5DFF2	B5DFF2_RAT	Rbpms2	RNA binding protein, mRNA processing factor 2	1	QPVGFVIFDSR	QPVGFVIFDSR	2	QPVGFVIFDSR2	70141	61342.4	60335.3
P34067	P34067	PSB4_RAT	Psmb4	Proteasome subunit beta type-4	1	QPVLSQTEAR	QPVLSQTEAR	2	QPVLSQTEAR2	2.24037e+06	2.08548e+06	2.51888e+06
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	QPVPLEQVEALK	QPVPLEQVEALK	2	QPVPLEQVEALK2	74933.8	58274.9	58248.6
A0A8J8YNR6	A0A8J8YNR6	A0A8J8YNR6_RAT	Fxr2	FMR1 autosomal homolog 2	1	QPVTVADYISR	QPVTVADYISR	2	QPVTVADYISR2	4970.55		4914.7
Q704S8	Q704S8	CACP_RAT	Crat	Carnitine O-acetyltransferase	1	QPVVIYSSPGVLLPK	QPVVIYSSPGVLLPK	2	QPVVIYSSPGVLLPK2	11639.4	10219.7	8560.58
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QPVYDTTIR	QPVYDTTIR	2	QPVYDTTIR2	41217.8	50291	53587.5
Q6ZXC8	Q6ZXC8	SIA8E_RAT	St8sia5	Alpha-2,8-sialyltransferase 8E	1	QPVYFFHPQYLSSVSR	QPVYFFHPQYLSSVSR	3	QPVYFFHPQYLSSVSR3	3290.42	3543.3	3291.96
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	QPVYVADVSK	QPVYVADVSK	2	QPVYVADVSK2	84683.4	96371.2	93091.9
D4A529	D4A529	D4A529_RAT	She	Src homology 2 domain containing E	1	QPWYHGSISR	QPWYHGSISR	3	QPWYHGSISR3	38579	43796	23921.2
Q4KLL4	Q4KLL4	TM9S4_RAT	Tm9sf4	Transmembrane 9 superfamily member 4	1	QPYDNPVR	QPYDNPVR	2	QPYDNPVR2	8486.26	7473.02	10803.3
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	QPYYATR	QPYYATR	2	QPYYATR2	43944.5	36945.2	40019.2
B5DF55	B5DF55	B5DF55_RAT	Stam	Signal transducing adaptor molecule	1	QQAAPLSTLYPSTSSLLTNHQHEGR	QQAAPLSTLYPSTSSLLTNHQHEGR	4	QQAAPLSTLYPSTSSLLTNHQHEGR4	15370.2	18759.5	19752.2
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	QQAAQHSTALLHWGALWR	QQAAQHSTALLHWGALWR	3	QQAAQHSTALLHWGALWR3	24201.9	29983.2	21826.5
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	QQAAQHSTALLHWGALWR	QQAAQHSTALLHWGALWR	4	QQAAQHSTALLHWGALWR4	123868	133107	136894
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	QQADSNCGFAEEYEDLK	QQADSNC(UniMod:4)GFAEEYEDLK	3	QQADSNC(UniMod:4)GFAEEYEDLK3	28145.1	29394	33305.7
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	QQAEHAVEGDCDFHILK	QQAEHAVEGDC(UniMod:4)DFHILK	3	QQAEHAVEGDC(UniMod:4)DFHILK3	1.4396e+06	1.35535e+06	1.35195e+06
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	QQAEHAVEGDCDFHILK	QQAEHAVEGDC(UniMod:4)DFHILK	4	QQAEHAVEGDC(UniMod:4)DFHILK4	224064	233755	4.09719e+06
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	QQAEHAVEGDCDFHILKQDGQFR	QQAEHAVEGDC(UniMod:4)DFHILKQDGQFR	4	QQAEHAVEGDC(UniMod:4)DFHILKQDGQFR4	11880.8	7914.1	9889.07
Q6AXM6	Q6AXM6	Q6AXM6_RAT	Icam2	Intercellular adhesion molecule 2	1	QQAESFNIR	QQAESFNIR	2	QQAESFNIR2	10914.9	11555.9	9347.17
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	QQAEVEVK	QQAEVEVK	2	QQAEVEVK2	21515.4	10544.1	19337
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	QQAHDLLINKPDGTFLLR	QQAHDLLINKPDGTFLLR	3	QQAHDLLINKPDGTFLLR3	11965.3		12714.8
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	QQAHDLLINKPDGTFLLR	QQAHDLLINKPDGTFLLR	4	QQAHDLLINKPDGTFLLR4	24455.7	31770.8	31356.7
Q5FVF9	Q5FVF9	BTD_RAT	Btd	Biotinidase	1	QQALELMK	QQALELMK	1	QQALELMK1	735.859		
Q5FVF9	Q5FVF9	BTD_RAT	Btd	Biotinidase	1	QQALELMK	QQALELMK	2	QQALELMK2	148250	118329	94669.8
Q5RK30	Q5RK30	SBDS_RAT	Sbds	Ribosome maturation protein SBDS	1	QQALEVIK	QQALEVIK	2	QQALEVIK2	2401.82		3356.41
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	QQALKPQAK	QQALKPQAK	2	QQALKPQAK2			11319.5
Q6IUP3	Q6IUP3	ELP5_RAT	Elp5	Elongator complex protein 5	1	QQALLHPVPGQTTGR	QQALLHPVPGQTTGR	3	QQALLHPVPGQTTGR3	28085.4	16865.5	16839.6
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	QQALTVSTDPEHR	QQALTVSTDPEHR	2	QQALTVSTDPEHR2	18288.8	15612.7	10210.2
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	QQALTVSTDPEHR	QQALTVSTDPEHR	3	QQALTVSTDPEHR3	134499	108465	112900
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	QQALTVSTDPEHRFELALQLGELK	QQALTVSTDPEHRFELALQLGELK	4	QQALTVSTDPEHRFELALQLGELK4	15521.4	25849.6	24538.9
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	QQANTIFWSPQGQFVVLAGLR	QQANTIFWSPQGQFVVLAGLR	3	QQANTIFWSPQGQFVVLAGLR3	22805.7	25528.5	22021.8
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	QQAPLVSVSPASEEVSK	QQAPLVSVSPASEEVSK	2	QQAPLVSVSPASEEVSK2	21582.5	21691.2	18393
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	QQAPLVSVSPASEEVSK	QQAPLVSVSPASEEVSK	3	QQAPLVSVSPASEEVSK3	6167.85	6759.1	6384.13
Q9R0Z7	Q9R0Z7	AAGAB_RAT	Aagab	Alpha- and gamma-adaptin-binding protein p34	1	QQAQEWCIK	QQAQEWC(UniMod:4)IK	2	QQAQEWC(UniMod:4)IK2	3329.53	1340.9	2714.98
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	QQAQVEVIHSGQK	QQAQVEVIHSGQK	3	QQAQVEVIHSGQK3	14052.1	11436.5	12584.6
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	QQASDTGTLVSR	QQASDTGTLVSR	2	QQASDTGTLVSR2	9033.28	9138.79	2425.04
F7FI79	F7FI79	F7FI79_RAT	Fhip2b	FHF complex subunit HOOK interacting protein 2B	1	QQASSGEAGPCLEYLLQHK	QQASSGEAGPC(UniMod:4)LEYLLQHK	3	QQASSGEAGPC(UniMod:4)LEYLLQHK3	2160.07		
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	QQASTDSPCSLR	QQASTDSPC(UniMod:4)SLR	2	QQASTDSPC(UniMod:4)SLR2	3401.44	4793.51	4419.11
A0A8I6AAD8	A0A8I6AAD8	A0A8I6AAD8_RAT	Snx4	Sorting nexin 4	1	QQCEELATGTVR	QQC(UniMod:4)EELATGTVR	2	QQC(UniMod:4)EELATGTVR2	833.135		2516.85
Q6P756	Q6P756	NECP2_RAT	Necap2	Adaptin ear-binding coat-associated protein 2	1	QQCEFAK	QQC(UniMod:4)EFAK	2	QQC(UniMod:4)EFAK2	10566.9	6243.39	6265.01
A0A0G2K1A4	A0A0G2K1A4	A0A0G2K1A4_RAT	Evi5l	Ecotropic viral integration site 5-like	1	QQCSSTAEDLQK	QQC(UniMod:4)SSTAEDLQK	2	QQC(UniMod:4)SSTAEDLQK2	1260.96	2108.92	4285.54
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	QQDAQEFFLHLINMVER	QQDAQEFFLHLINMVER	3	QQDAQEFFLHLINMVER3	30555.1	23224.6	17047.4
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	QQDEYYQK	QQDEYYQK	2	QQDEYYQK2	857483	826010	646517
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	QQDHFFQAAYLEER	QQDHFFQAAYLEER	2	QQDHFFQAAYLEER2	191040	183838	175063
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	QQDHFFQAAYLEER	QQDHFFQAAYLEER	3	QQDHFFQAAYLEER3	2.25739e+06	2.55321e+06	2.49972e+06
D4A529	D4A529	D4A529_RAT	She	Src homology 2 domain containing E	1	QQDTVIILEDYADPYDAK	QQDTVIILEDYADPYDAK	3	QQDTVIILEDYADPYDAK3	7104.84		5929.09
A0A8I6GHH3	A0A8I6GHH3	A0A8I6GHH3_RAT	Sh3bgrl	SH3 domain binding glutamate-rich protein like	1	QQDVLCFLEANK	QQDVLC(UniMod:4)FLEANK	2	QQDVLC(UniMod:4)FLEANK2	8537.71		5862.02
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	QQEAALELEELK	QQEAALELEELK	2	QQEAALELEELK2	159095	238058	169066
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	QQEAALELEELK	QQEAALELEELK	3	QQEAALELEELK3	25396.2	13200.4	23525.2
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	QQEAALELEELKK	QQEAALELEELKK	2	QQEAALELEELKK2	4359.16	5376.19	9887.51
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	QQEAALELEELKK	QQEAALELEELKK	3	QQEAALELEELKK3	121741	149499	135564
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	QQEAALELEELKKK	QQEAALELEELKKK	3	QQEAALELEELKKK3	6693.28	8262.69	8048.64
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	QQEAALELEELKKK	QQEAALELEELKKK	4	QQEAALELEELKKK4	10482.8	12135.4	17344.5
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	QQEADIQNCK	QQEADIQNC(UniMod:4)K	2	QQEADIQNC(UniMod:4)K2	9877.38	10159.9	
Q5RJK6	Q5RJK6	Q5RJK6_RAT	Inpp1	Inositol polyphosphate-1-phosphatase	1	QQEALFQLLIEEK	QQEALFQLLIEEK	2	QQEALFQLLIEEK2	3381.16	4054.92	2236.87
Q9JLH7	Q9JLH7	CK5P3_RAT	Cdk5rap3	CDK5 regulatory subunit-associated protein 3	1	QQEALQEQAALEPK	QQEALQEQAALEPK	2	QQEALQEQAALEPK2	5969.67	15779.5	17493.4
P58200	P58200	VTI1B_RAT	Vti1b	Vesicle transport through interaction with t-SNAREs homolog 1B	1	QQEANETLAEMEEELR	QQEANETLAEMEEELR	2	QQEANETLAEMEEELR2	6028.8	6536.29	5486.05
P58200	P58200	VTI1B_RAT	Vti1b	Vesicle transport through interaction with t-SNAREs homolog 1B	1	QQEANETLAEMEEELR	QQEANETLAEMEEELR	3	QQEANETLAEMEEELR3	3743.57	3779.05	4783.36
Q4V7F2	Q4V7F2	CREL1_RAT	Creld1	Protein disulfide isomerase Creld1	1	QQEAPDLFQWLCSDSLK	QQEAPDLFQWLC(UniMod:4)SDSLK	3	QQEAPDLFQWLC(UniMod:4)SDSLK3	3523.25		8338.28
Q09326	Q09326	MGAT2_RAT	Mgat2	Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	1	QQECPGCDVLSLGTYTTIR	QQEC(UniMod:4)PGC(UniMod:4)DVLSLGTYTTIR	3	QQEC(UniMod:4)PGC(UniMod:4)DVLSLGTYTTIR3		4126.15	3765.3
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	QQEDVSVVR	QQEDVSVVR	2	QQEDVSVVR2		5175.23	
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	QQEEEEEEER	QQEEEEEEER	2	QQEEEEEEER2			10908
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	QQEEEEEEERLSR	QQEEEEEEERLSR	3	QQEEEEEEERLSR3	34895.3	39467.5	30408.5
A0A8I6GL39	A0A8I6GL39	A0A8I6GL39_RAT	Scamp2	Secretory carrier-associated membrane protein	1	QQEELDR	QQEELDR	2	QQEELDR2	63235.8	47636	59837.4
A0A8I6GL39	A0A8I6GL39	A0A8I6GL39_RAT	Scamp2	Secretory carrier-associated membrane protein	1	QQEELDRK	QQEELDRK	2	QQEELDRK2			13525.1
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	QQEFFLGCSK	QQEFFLGC(UniMod:4)SK	2	QQEFFLGC(UniMod:4)SK2	7109.71	11824.7	5925.37
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	QQEIEMNR	QQEIEMNR	2	QQEIEMNR2	25780.7	35459.6	30588.6
Q6AY86	Q6AY86	VP26A_RAT	Vps26a	Vacuolar protein sorting-associated protein 26A	1	QQEIILWR	QQEIILWR	2	QQEIILWR2	27286.8	16218.7	25908.4
E9PT66	E9PT66	E9PT66_RAT	Sf3b3	Splicing factor 3b, subunit 3	1	QQEIVVSR	QQEIVVSR	2	QQEIVVSR2	9011.73	8139.01	4215.89
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	QQELTHQEHR	QQELTHQEHR	2	QQELTHQEHR2			13032.6
Q6P9U8	Q6P9U8	EIF3H_RAT	Eif3h	Eukaryotic translation initiation factor 3 subunit H	1	QQENMQR	QQENMQR	2	QQENMQR2			9853.83
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	QQEQLVPTLEK	QQEQLVPTLEK	2	QQEQLVPTLEK2	12891.1	10320.2	10900.5
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	QQESSEQLAEK	QQESSEQLAEK	2	QQESSEQLAEK2		19439.4	
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	QQEVGQLDFR	QQEVGQLDFR	2	QQEVGQLDFR2	31071.6	41346.8	42861.9
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QQEVIADK	QQEVIADK	1	QQEVIADK1	1428.26	2320.49	1433.92
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QQEVIADK	QQEVIADK	2	QQEVIADK2	281082	301672	290017
P14056	P14056	ARAF_RAT	Araf	Serine/threonine-protein kinase A-Raf	1	QQEVPSNLSVNELLTPQGPSPFTQQR	QQEVPSNLSVNELLTPQGPSPFTQQR	3	QQEVPSNLSVNELLTPQGPSPFTQQR3	16601.1	16535	28476.5
D4AAC3	D4AAC3	D4AAC3_RAT	Sh3bgr	SH3 domain binding glutamate-rich protein	1	QQEVVGFLEANK	QQEVVGFLEANK	2	QQEVVGFLEANK2	3485.39		1359.76
P38652	P38652	PGM1_RAT	Pgm1	Phosphoglucomutase-1	1	QQFDLENK	QQFDLENK	2	QQFDLENK2	3852.57	3125.54	3767.73
Q6AYQ1	Q6AYQ1	GOGA7_RAT	Golga7	Golgin subfamily A member 7	1	QQFEETVR	QQFEETVR	2	QQFEETVR2	23114.1	10802.9	20147.1
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	QQFIFPDISACPQAAPLSSTADSTR	QQFIFPDISAC(UniMod:4)PQAAPLSSTADSTR	3	QQFIFPDISAC(UniMod:4)PQAAPLSSTADSTR3	6072.41	5070.61	
Q62703	Q62703	RCN2_RAT	Rcn2	Reticulocalbin-2	1	QQFVEYDK	QQFVEYDK	2	QQFVEYDK2	31874.1	33644.1	24423.8
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	QQFYDIPTSSQK	QQFYDIPTSSQK	2	QQFYDIPTSSQK2	176334	185285	208018
Q5BJT7	Q5BJT7	CCD93_RAT	Ccdc93	Coiled-coil domain-containing protein 93	1	QQGAEELLDEESR	QQGAEELLDEESR	2	QQGAEELLDEESR2	4528.12		
P0CE43	P0CE43	GRB10_RAT	Grb10	Growth factor receptor-bound protein 10	1	QQGLVDGLFLLR	QQGLVDGLFLLR	2	QQGLVDGLFLLR2	9634.98	4593.44	11337.4
D4A748	D4A748	D4A748_RAT	Wdfy4	WDFY family member 4	1	QQGPAAVEAVNTFHPYFYGDR	QQGPAAVEAVNTFHPYFYGDR	3	QQGPAAVEAVNTFHPYFYGDR3	3151.58	3844.42	6172.82
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	QQGPEAVR	QQGPEAVR	2	QQGPEAVR2	8394.35	13231.1	9907.41
A0A8I6ABQ2	A0A8I6ABQ2	A0A8I6ABQ2_RAT	Bcl2l13	BCL2 like 13	1	QQGPSPQGSQLDVAPQSLNPEVLLK	QQGPSPQGSQLDVAPQSLNPEVLLK	3	QQGPSPQGSQLDVAPQSLNPEVLLK3	51199.5	58319.1	57271.7
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	QQGQPLFCAK	QQGQPLFC(UniMod:4)AK	2	QQGQPLFC(UniMod:4)AK2	27412.9	24569.7	22527.6
Q63433	Q63433	PKN1_RAT	Pkn1	Serine/threonine-protein kinase N1	1	QQGQTFQR	QQGQTFQR	2	QQGQTFQR2	8149.7	9767.71	
Q9QXU2	Q9QXU2	SURF1_RAT	Surf1	Surfeit locus protein 1	1	QQGQVLGEVDLVGIVR	QQGQVLGEVDLVGIVR	2	QQGQVLGEVDLVGIVR2	3023.54	423.969	7882.52
Q66H91	Q66H91	GIT2_RAT	Git2	ARF GTPase-activating protein GIT2	1	QQGSPLSR	QQGSPLSR	2	QQGSPLSR2	11260.6	12327.3	
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	QQGVLALRPYLQK	QQGVLALRPYLQK	3	QQGVLALRPYLQK3	89840		89248.4
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	QQGVLGLNMAPCMR	QQGVLGLNMAPC(UniMod:4)MR	2	QQGVLGLNMAPC(UniMod:4)MR2	4408.04		
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	QQHEEPDGGFRK	QQHEEPDGGFRK	3	QQHEEPDGGFRK3	21138.7		17180.4
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QQHEQLTEAAQGILTGPGDVSPSASQVHK	QQHEQLTEAAQGILTGPGDVSPSASQVHK	4	QQHEQLTEAAQGILTGPGDVSPSASQVHK4	7593.04	7335.12	8772.7
O55156	O55156;Q9JK25	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	0	QQHIEQLLAER	QQHIEQLLAER	2	QQHIEQLLAER2	24678.8	21513.7	20016.2
O55156	O55156;Q9JK25	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	0	QQHIEQLLAER	QQHIEQLLAER	3	QQHIEQLLAER3	260436	244942	243706
O55156	O55156;Q9JK25	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	0	QQHIEQLLAERDLER	QQHIEQLLAERDLER	4	QQHIEQLLAERDLER4	5438.47	9533.08	9812.08
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	QQHLTELEAHK	QQHLTELEAHK	3	QQHLTELEAHK3	27573.5	21338.2	20962.7
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	QQHLTELEAHKDLVQSAVWSR	QQHLTELEAHKDLVQSAVWSR	4	QQHLTELEAHKDLVQSAVWSR4	18017.4	22277	14101.5
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	QQHNSFVDFLLAHLR	QQHNSFVDFLLAHLR	4	QQHNSFVDFLLAHLR4	3319.7		4684.16
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	QQHQEQQALQQSTTAK	QQHQEQQALQQSTTAK	3	QQHQEQQALQQSTTAK3	9700.45	26434.9	17712.6
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	QQIACIGGPPNICLDR	QQIAC(UniMod:4)IGGPPNIC(UniMod:4)LDR	2	QQIAC(UniMod:4)IGGPPNIC(UniMod:4)LDR2	8451.28	5410.09	3131.05
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	QQIACIGGPPNICLDR	QQIAC(UniMod:4)IGGPPNIC(UniMod:4)LDR	3	QQIAC(UniMod:4)IGGPPNIC(UniMod:4)LDR3	15832.6	7990.48	3534.93
P14668	P14668	ANXA5_RAT	Anxa5	Annexin A5	1	QQIAEEFK	QQIAEEFK	2	QQIAEEFK2		7904.48	
Q5HZY0	Q5HZY0	UBXN4_RAT	Ubxn4	UBX domain-containing protein 4	1	QQIALDR	QQIALDR	2	QQIALDR2	37567.8	29957.8	32040.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	QQIEALDVPMHLDQLR	QQIEALDVPMHLDQLR	2	QQIEALDVPMHLDQLR2	27875.8	35490.4	29604.7
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	QQIEALDVPMHLDQLR	QQIEALDVPMHLDQLR	3	QQIEALDVPMHLDQLR3	230408	244890	184624
A0A8I5ZU93	A0A8I5ZU93	A0A8I5ZU93_RAT	Cops7a	COP9 signalosome subunit 7A	1	QQIESEVANLK	QQIESEVANLK	2	QQIESEVANLK2	16761.7	12521.5	11933.3
A0A8I5ZU93	A0A8I5ZU93	A0A8I5ZU93_RAT	Cops7a	COP9 signalosome subunit 7A	1	QQIESEVANLKK	QQIESEVANLKK	3	QQIESEVANLKK3	14983.4	19029.2	25535.8
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	QQIESLTGAHQR	QQIESLTGAHQR	3	QQIESLTGAHQR3	12542.9	8049.29	9847.71
A0A8I5ZTN5	A0A8I5ZTN5	A0A8I5ZTN5_RAT	Adsl	Adenylosuccinate lyase	1	QQIGSSAMPYK	QQIGSSAMPYK	2	QQIGSSAMPYK2	18189	20376.5	19092.7
O88959	O88959	INHBE_RAT	Inhbe	Inhibin beta E chain	1	QQILEGLHLTSRPR	QQILEGLHLTSRPR	4	QQILEGLHLTSRPR4	26048.6	16548.8	27049.8
Q63100	Q63100	DC1I1_RAT	Dync1i1	Cytoplasmic dynein 1 intermediate chain 1	1	QQILHSEEFLIFFDR	QQILHSEEFLIFFDR	3	QQILHSEEFLIFFDR3	2510.9	6435.7	2241
Q62871	Q62871	DC1I2_RAT	Dync1i2	Cytoplasmic dynein 1 intermediate chain 2	1	QQILHSEEFLSFFDHSTR	QQILHSEEFLSFFDHSTR	3	QQILHSEEFLSFFDHSTR3	14012.1	28002.2	26371.7
Q62871	Q62871	DC1I2_RAT	Dync1i2	Cytoplasmic dynein 1 intermediate chain 2	1	QQILHSEEFLSFFDHSTR	QQILHSEEFLSFFDHSTR	4	QQILHSEEFLSFFDHSTR4	40908.2	56267.2	49925.4
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	QQILLSFK	QQILLSFK	2	QQILLSFK2	98253.7	90242.3	120342
P35053	P35053	GPC1_RAT	Gpc1	Glypican-1	1	QQIMQLK	QQIMQLK	2	QQIMQLK2		16945	
Q497B0	Q497B0	NIT2_RAT	Nit2	Omega-amidase NIT2	1	QQIPILK	QQIPILK	2	QQIPILK2	22467.3	20032.4	22089.6
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	QQIQNDLNQWK	QQIQNDLNQWK	2	QQIQNDLNQWK2	12279	8719.91	19774.8
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	QQISLATQMVR	QQISLATQMVR	2	QQISLATQMVR2	77067.7	68263.6	78485.7
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	QQITTQK	QQITTQK	1	QQITTQK1			1483.51
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	QQITTQK	QQITTQK	2	QQITTQK2			89071.5
P14046	Q6IE52;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	QQKDSGCFR	QQKDSGC(UniMod:4)FR	2	QQKDSGC(UniMod:4)FR2	2215.68		24232
Q6P7P5	Q6P7P5	5MP2_RAT	Bzw1	eIF5-mimic protein 2	1	QQKPTLSGQR	QQKPTLSGQR	2	QQKPTLSGQR2			48289.9
Q6P7P5	Q6P7P5	5MP2_RAT	Bzw1	eIF5-mimic protein 2	1	QQKPTLSGQR	QQKPTLSGQR	3	QQKPTLSGQR3	157346		95255.1
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	QQLAEEEAR	QQLAEEEAR	2	QQLAEEEAR2	363112	405825	381726
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	QQLALGVLQQR	QQLALGVLQQR	2	QQLALGVLQQR2	2338.48	3130.67	4111.78
B2GV14	B2GV14	B2GV14_RAT	Txlna	Taxilin alpha	1	QQLALYTEK	QQLALYTEK	2	QQLALYTEK2	7384.56	1714.34	
A0A0G2K059	A0A0G2K059	A0A0G2K059_RAT	Mcu	Calcium uniporter protein	1	QQLAPLEK	QQLAPLEK	2	QQLAPLEK2	369979	346362	368100
Q6AY97	Q6AY97	CCD91_RAT	Ccdc91	Coiled-coil domain-containing protein 91	1	QQLDAIEK	QQLDAIEK	2	QQLDAIEK2	9771.37		10706.1
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	QQLDLTEHQGK	QQLDLTEHQGK	3	QQLDLTEHQGK3	7510.02	7757.1	6325.32
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QQLEDMVVDSLQWDDHREETEELMR	QQLEDMVVDSLQWDDHREETEELMR	4	QQLEDMVVDSLQWDDHREETEELMR4	59893.4	55339.8	53537.7
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QQLEETSEIR	QQLEETSEIR	2	QQLEETSEIR2	32151.8	30606.1	31527.8
Q91XJ1	Q91XJ1	BECN1_RAT	Becn1	Beclin-1	1	QQLELDDELK	QQLELDDELK	2	QQLELDDELK2	2469.61	2574.35	5469.66
P02764	P02764	A1AG_RAT	Orm1	Alpha-1-acid glycoprotein	1	QQLELEK	QQLELEK	2	QQLELEK2	56531.8	52623.7	53863.6
P02764	P02764	A1AG_RAT	Orm1	Alpha-1-acid glycoprotein	1	QQLELEKETK	QQLELEKETK	3	QQLELEKETK3	24252.3	38448.9	32166.9
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	QQLELMDTVHNLVSLCTK	QQLELMDTVHNLVSLC(UniMod:4)TK	3	QQLELMDTVHNLVSLC(UniMod:4)TK3	13805.8	16352.2	10972.9
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	QQLEQQQR	QQLEQQQR	2	QQLEQQQR2	217670		38543.3
Q9Z2X5	Q9Z2X5	HOME3_RAT	Homer3	Homer protein homolog 3	1	QQLEVQR	QQLEVQR	2	QQLEVQR2	17133	19690.4	16871.1
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	QQLFQELHGVR	QQLFQELHGVR	2	QQLFQELHGVR2		4374.63	
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	QQLFQELHGVR	QQLFQELHGVR	3	QQLFQELHGVR3	15605	22242.5	11926.9
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	QQLGSDSGDVESHLSFLEK	QQLGSDSGDVESHLSFLEK	3	QQLGSDSGDVESHLSFLEK3	41911.6	32762.8	31194
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	QQLGTSVELEMAK	QQLGTSVELEMAK	2	QQLGTSVELEMAK2	140314	137559	145232
F1LMQ3	F1LMQ3	F1LMQ3_RAT	Psmd8	26S proteasome non-ATPase regulatory subunit 8	1	QQLILAR	QQLILAR	2	QQLILAR2	132113	126446	118090
Q4V897	Q4V897	CC90B_RAT	Ccdc90b	Coiled-coil domain-containing protein 90B, mitochondrial	1	QQLINETSR	QQLINETSR	2	QQLINETSR2	13417.5	17827.5	19627.5
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	QQLKPYTVELMEQVGLSVQDLQEQLR	QQLKPYTVELMEQVGLSVQDLQEQLR	4	QQLKPYTVELMEQVGLSVQDLQEQLR4	7086.96	7624.12	6406.57
A0A0G2K012	A0A0G2K012	A0A0G2K012_RAT	Ubxn6	UBX domain protein 6	1	QQLLGAEPVR	QQLLGAEPVR	2	QQLLGAEPVR2	7612.31	7186.51	7851.97
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	QQLLIGAYAK	QQLLIGAYAK	2	QQLLIGAYAK2	246125	254976	246758
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	QQLLQEQQLR	QQLLQEQQLR	2	QQLLQEQQLR2	10333.6	15645.2	8646.04
A0A096MJ11	A0A096MJ11	A0A096MJ11_RAT	Gsdmd	Gasdermin D	1	QQLLVDIGR	QQLLVDIGR	2	QQLLVDIGR2	19904.9	27857.9	15619.2
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	QQLNLLK	QQLNLLK	2	QQLNLLK2	6839.56	12055.4	
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	QQLNNMSFAEIIMGYK	QQLNNMSFAEIIMGYK	2	QQLNNMSFAEIIMGYK2	8613.72	6832.19	10959.5
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	QQLQGINVCGGQCCHGWSK	QQLQGINVC(UniMod:4)GGQC(UniMod:4)C(UniMod:4)HGWSK	3	QQLQGINVC(UniMod:4)GGQC(UniMod:4)C(UniMod:4)HGWSK3	27926.9	29137.8	25112
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	QQLQLSLQNTR	QQLQLSLQNTR	2	QQLQLSLQNTR2	10034.5	9621.11	6430.06
Q6TMG5	Q6TMG5	NEMO_RAT	Ikbkg	NF-kappa-B essential modulator	1	QQLQQAEEALVAK	QQLQQAEEALVAK	2	QQLQQAEEALVAK2	5547.58	4184.72	5058.14
O70257	O70257	STX7_RAT	Stx7	Syntaxin-7	1	QQLQQEQQYTNQLAK	QQLQQEQQYTNQLAK	2	QQLQQEQQYTNQLAK2	11257.2	10055.6	6857.84
O70257	O70257	STX7_RAT	Stx7	Syntaxin-7	1	QQLQQEQQYTNQLAK	QQLQQEQQYTNQLAK	3	QQLQQEQQYTNQLAK3	30822	28221.1	42106.8
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	QQLQVISDREEPDVAYR	QQLQVISDREEPDVAYR	3	QQLQVISDREEPDVAYR3	74614.1	90312.2	88313.3
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	QQLSDMR	QQLSDMR	2	QQLSDMR2	63629.1	70990	75978
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	QQLTNQLADAK	QQLTNQLADAK	2	QQLTNQLADAK2	5253.7	6601.46	12876.3
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	QQLTNTEVR	QQLTNTEVR	2	QQLTNTEVR2	141216	114651	113654
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	QQLVASHLEK	QQLVASHLEK	2	QQLVASHLEK2	58747.8	50235.5	36058.1
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	QQLVASHLEK	QQLVASHLEK	3	QQLVASHLEK3	324001	322586	351613
P15943	P15943	APLP2_RAT	Aplp2	Amyloid beta precursor like protein 2	1	QQLVETHLAR	QQLVETHLAR	2	QQLVETHLAR2	5828.85	5842.17	7563.54
P15943	P15943	APLP2_RAT	Aplp2	Amyloid beta precursor like protein 2	1	QQLVETHLAR	QQLVETHLAR	3	QQLVETHLAR3	68758.4	55650.2	59447.9
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	QQLVETHMAR	QQLVETHMAR	2	QQLVETHMAR2	8423.1	6993.37	5373.83
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	QQLVETHMAR	QQLVETHMAR	3	QQLVETHMAR3	81917.1	81871.6	66473.7
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	QQMAEDSK	QQMAEDSK	2	QQMAEDSK2			10363.7
D3ZKE1	D3ZKE1	D3ZKE1_RAT	Uvrag	UV radiation resistance associated	1	QQMALQDK	QQMALQDK	1	QQMALQDK1	12622	12847.5	8826.47
D3ZKE1	D3ZKE1	D3ZKE1_RAT	Uvrag	UV radiation resistance associated	1	QQMALQDK	QQMALQDK	2	QQMALQDK2	8440.98	12483.2	7945.63
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	QQMDALSR	QQMDALSR	2	QQMDALSR2	2.73921e+06	3.01687e+06	3.18452e+06
A0A8I6GL10	A0A8I6GL10	A0A8I6GL10_RAT	Uchl5	Ubiquitin carboxyl-terminal hydrolase	1	QQMFEFDTK	QQMFEFDTK	2	QQMFEFDTK2	6853.88	3327.89	4303.18
D3ZLN7	D3ZLN7	D3ZLN7_RAT	Commd2	COMM domain containing 2	1	QQMKPAVTIK	QQMKPAVTIK	3	QQMKPAVTIK3	7706.06	6352.19	9347.46
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QQMLDIQAEIDAHNDIFK	QQMLDIQAEIDAHNDIFK	3	QQMLDIQAEIDAHNDIFK3	14523.2	7794.17	5813.37
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	QQMLENQMEVR	QQMLENQMEVR	2	QQMLENQMEVR2	336188	358492	340373
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	QQMLENQMEVR	QQMLENQMEVR	3	QQMLENQMEVR3	7165.28	8237.84	12632.1
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	QQMLEQHLQDVR	QQMLEQHLQDVR	2	QQMLEQHLQDVR2	1235.36	1039.28	831.213
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	QQMLEQHLQDVR	QQMLEQHLQDVR	3	QQMLEQHLQDVR3	27719.5	35099.3	24717
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	QQNDELTTLADEAQSLK	QQNDELTTLADEAQSLK	2	QQNDELTTLADEAQSLK2	10462.8	10040.3	7823.14
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	QQNDELTTLADEAQSLK	QQNDELTTLADEAQSLK	3	QQNDELTTLADEAQSLK3	19634	13019.4	10501.2
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	QQNFNTGIK	QQNFNTGIK	2	QQNFNTGIK2	316970	320379	357017
Q62991	Q62991	SCFD1_RAT	Scfd1	Sec1 family domain-containing protein 1	1	QQNLPVTR	QQNLPVTR	2	QQNLPVTR2	40217.5	25839.6	44867.4
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	QQNQDTLDQLEK	QQNQDTLDQLEK	2	QQNQDTLDQLEK2	11891.5	10642	7521.61
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	QQNQDTLDQLEKEK	QQNQDTLDQLEKEK	3	QQNQDTLDQLEKEK3	6329.57	6291.96	2035.61
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	QQNSELEEK	QQNSELEEK	2	QQNSELEEK2	22762.5	25092.3	35407.5
Q03626	Q6IE52;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	QQNSHGGFSSTQDTVVALDALSK	QQNSHGGFSSTQDTVVALDALSK	3	QQNSHGGFSSTQDTVVALDALSK3	1.85672e+06	1.42267e+06	1.23803e+06
Q03626	Q6IE52;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	QQNSHGGFSSTQDTVVALDALSK	QQNSHGGFSSTQDTVVALDALSK	4	QQNSHGGFSSTQDTVVALDALSK4	17611.6	14103	7701.76
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	QQNSHGGFSSTQDTVVALQALSK	QQNSHGGFSSTQDTVVALQALSK	3	QQNSHGGFSSTQDTVVALQALSK3	227557	204585	236523
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	QQNSHGGFSSTQDTVVALQALSK	QQNSHGGFSSTQDTVVALQALSK	4	QQNSHGGFSSTQDTVVALQALSK4	126594	91343.6	101968
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	QQNSYGGFSSTQDTVVALDALSK	QQNSYGGFSSTQDTVVALDALSK	3	QQNSYGGFSSTQDTVVALDALSK3	28963.9	27669.4	23382.9
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	QQNSYGGFSSTQDTVVALDALSK	QQNSYGGFSSTQDTVVALDALSK	4	QQNSYGGFSSTQDTVVALDALSK4	118814	114043	116055
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	QQPAAAAEAK	QQPAAAAEAK	2	QQPAAAAEAK2			28378.5
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	QQPADAAARPGVHETLNEIQQQLQLLDNR	QQPADAAARPGVHETLNEIQQQLQLLDNR	4	QQPADAAARPGVHETLNEIQQQLQLLDNR4	38852.5	32140	45368
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	QQPAFALK	QQPAFALK	1	QQPAFALK1	2.36909e+06	1.99021e+06	2.1979e+06
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	QQPAFALK	QQPAFALK	2	QQPAFALK2	1.25833e+08	1.07801e+08	1.1404e+08
P14046	A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	QQPAFALKVQTVPLTCNNPK	QQPAFALKVQTVPLTC(UniMod:4)NNPK	3	QQPAFALKVQTVPLTC(UniMod:4)NNPK3	354289	281406	268639
A0A8I6AKH5	D3ZCD6;A0A8I6AKH5	A0A8I6AKH5_RAT	ENSRNOG00000063713	Ig-like domain-containing protein	0	QQPGNGLEWIGWIYPGNGNTK	QQPGNGLEWIGWIYPGNGNTK	3	QQPGNGLEWIGWIYPGNGNTK3	35019.5	42069.9	39769.1
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	QQPIWHTLR	QQPIWHTLR	2	QQPIWHTLR2	19216.2	16499.6	18272.2
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	QQPIWHTLR	QQPIWHTLR	3	QQPIWHTLR3	114693	133905	128592
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	QQPLFVSGGDDYK	QQPLFVSGGDDYK	2	QQPLFVSGGDDYK2	180716	222473	189513
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	QQPLFVSGGDDYKIK	QQPLFVSGGDDYKIK	3	QQPLFVSGGDDYKIK3	15716	10480.9	16124.2
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	QQPPEPEWIGDGEGTSPADK	QQPPEPEWIGDGEGTSPADK	3	QQPPEPEWIGDGEGTSPADK3	20172.3	27901.8	24876.2
D3ZSY8	D3ZSY8	D3ZSY8_RAT	Tbc1d10b	TBC1 domain family, member 10b	1	QQPPLGPSSSLLSLPSLK	QQPPLGPSSSLLSLPSLK	2	QQPPLGPSSSLLSLPSLK2	10160.2	14794	11507.1
D3ZSY8	D3ZSY8	D3ZSY8_RAT	Tbc1d10b	TBC1 domain family, member 10b	1	QQPPLGPSSSLLSLPSLK	QQPPLGPSSSLLSLPSLK	3	QQPPLGPSSSLLSLPSLK3	6103.77	9523.06	3129.07
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	QQPSPHGDLAK	QQPSPHGDLAK	2	QQPSPHGDLAK2	58065.5		58080.1
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	QQPSPHGDLAK	QQPSPHGDLAK	3	QQPSPHGDLAK3	118694		128653
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	QQPVSESPPTDEAAGSGGSEVGR	QQPVSESPPTDEAAGSGGSEVGR	3	QQPVSESPPTDEAAGSGGSEVGR3	11617.6	12195.2	10518
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	QQQAATSESSNQSETSVR	QQQAATSESSNQSETSVR	2	QQQAATSESSNQSETSVR2	1386.75		
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	QQQAATSESSNQSETSVRR	QQQAATSESSNQSETSVRR	3	QQQAATSESSNQSETSVRR3			5080.04
Q5BK32	Q5BK32	FAF2_RAT	Faf2	FAS-associated factor 2	1	QQQDEAYLASLR	QQQDEAYLASLR	2	QQQDEAYLASLR2	20169.8	18029.3	21215.4
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	QQQDYLTQLSDLEK	QQQDYLTQLSDLEK	2	QQQDYLTQLSDLEK2	1661.09		3261.99
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QQQEEMR	QQQEEMR	2	QQQEEMR2			11689.1
F7EUU4	F7EUU4	F7EUU4_RAT	Cops5	COP9 signalosome subunit 5	1	QQQEILAAK	QQQEILAAK	2	QQQEILAAK2	5963.7	8886.2	6816.88
F7EUU4	F7EUU4	F7EUU4_RAT	Cops5	COP9 signalosome subunit 5	1	QQQEILAAKPWTK	QQQEILAAKPWTK	3	QQQEILAAKPWTK3	16832.5	19108	25404.3
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	QQQELDGALK	QQQELDGALK	2	QQQELDGALK2	15579.6	18225.1	11007.5
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	QQQELDGALKK	QQQELDGALKK	2	QQQELDGALKK2	5510.29	2313.6	4753.57
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	QQQELDGALKK	QQQELDGALKK	3	QQQELDGALKK3	53283.7	47004.3	49925.2
O35346	O35346	FAK1_RAT	Ptk2	Focal adhesion kinase 1	1	QQQEMEEDQR	QQQEMEEDQR	2	QQQEMEEDQR2	4400		3585.6
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	QQQEQLLK	QQQEQLLK	2	QQQEQLLK2	7068.16	4152.28	6324.57
A0A0G2K6R0	A0A0G2K6R0	A0A0G2K6R0_RAT	Tnrc6b	Trinucleotide repeat containing adaptor 6B	1	QQQEQQLAR	QQQEQQLAR	2	QQQEQQLAR2	2701.29		6661.87
A0A8I6A678	A0A8I6A678	A0A8I6A678_RAT	Snx2	Sorting nexin-2	1	QQQFENLDQQLR	QQQFENLDQQLR	2	QQQFENLDQQLR2	5708.47	10694.5	5405.08
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	QQQFNVQALVAVGDHASK	QQQFNVQALVAVGDHASK	3	QQQFNVQALVAVGDHASK3	41034.3	39589.9	45578.4
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	QQQLEEMR	QQQLEEMR	2	QQQLEEMR2	5484.12		6442.24
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	QQQLEEMRK	QQQLEEMRK	3	QQQLEEMRK3	4801.24	5519.21	8290.42
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	QQQLFGVDYRPVLR	QQQLFGVDYRPVLR	3	QQQLFGVDYRPVLR3	66225.2	64779	68376.4
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	QQQLLNEENLR	QQQLLNEENLR	2	QQQLLNEENLR2	45609.9	35554.9	47126.1
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	QQQLMGPAMAR	QQQLMGPAMAR	2	QQQLMGPAMAR2	285126	284477	296717
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	QQQLMGPAMAR	QQQLMGPAMAR	3	QQQLMGPAMAR3	3173.54		10593.7
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QQQLTAMK	QQQLTAMK	1	QQQLTAMK1	27475.8	30355.1	31690.7
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QQQLTAMK	QQQLTAMK	2	QQQLTAMK2	1.85806e+06	1.75203e+06	1.91426e+06
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	QQQMHIVDMLSK	QQQMHIVDMLSK	3	QQQMHIVDMLSK3	4437.46	6527.22	5598.24
A0A8I6A502	A0A8I6A502	A0A8I6A502_RAT	Tns3	Tensin 3	1	QQQMVTAHQYSFASDGEAR	QQQMVTAHQYSFASDGEAR	3	QQQMVTAHQYSFASDGEAR3	4234.65	5315.6	6887.53
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	QQQPGVPGSLAR	QQQPGVPGSLAR	2	QQQPGVPGSLAR2	63782.1	58744.5	81760.6
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	QQQPPPETFDFK	QQQPPPETFDFK	2	QQQPPPETFDFK2	109483	89856.4	114326
Q9Z2Q7	Q9Z2Q7	STX8_RAT	Stx8	Syntaxin-8	1	QQQQKIIQEQDAGLDALSSIISR	QQQQKIIQEQDAGLDALSSIISR	4	QQQQKIIQEQDAGLDALSSIISR4			26299.4
F1LP90	F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	1	QQQQLQQQQQR	QQQQLQQQQQR	2	QQQQLQQQQQR2	1004.03		4914.4
D3ZHW0	D3ZHW0	D3ZHW0_RAT	Dhx29	ATP-dependent RNA helicase DHX29	1	QQQQLQQQR	QQQQLQQQR	2	QQQQLQQQR2			5715.85
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	QQQQLQSQR	QQQQLQSQR	2	QQQQLQSQR2			10903
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	QQQQPSASSILESLFR	QQQQPSASSILESLFR	3	QQQQPSASSILESLFR3			2434.03
Q5U316	Q5U316	RAB35_RAT	Rab35	Ras-related protein Rab-35	1	QQQQQQNDVVK	QQQQQQNDVVK	2	QQQQQQNDVVK2	31181.1	34889.8	33254.3
F1LP90	F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	1	QQQQQQQQQQQQQQQQILPGDR	QQQQQQQQQQQQQQQQILPGDR	3	QQQQQQQQQQQQQQQQILPGDR3		6743.88	6138.03
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	QQQQQQYLAR	QQQQQQYLAR	2	QQQQQQYLAR2	38938.4	37808.3	40882.7
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	QQQTMLR	QQQTMLR	2	QQQTMLR2	35044.3	52803	39198.7
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	QQQVEAVELESK	QQQVEAVELESK	2	QQQVEAVELESK2	5047.32	1031.67	1862.98
Q5M8C6	Q5M8C6	FGL1_RAT	Fgl1	Fibrinogen-like protein 1	1	QQQVVIAQLLHEK	QQQVVIAQLLHEK	2	QQQVVIAQLLHEK2	4723.19	4881.95	6170.55
Q5M8C6	Q5M8C6	FGL1_RAT	Fgl1	Fibrinogen-like protein 1	1	QQQVVIAQLLHEK	QQQVVIAQLLHEK	3	QQQVVIAQLLHEK3	33897.6	35330.7	28985.3
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	QQQYSDLLAHDQLLLER	QQQYSDLLAHDQLLLER	3	QQQYSDLLAHDQLLLER3	29258.1	20511.8	22464.5
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	QQREDGYDHR	QQREDGYDHR	2	QQREDGYDHR2			21939.9
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	QQREDGYDHRHPVGHGHGQR	QQREDGYDHRHPVGHGHGQR	4	QQREDGYDHRHPVGHGHGQR4	4033.34		2930.57
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	QQRPVPESQLLPGQR	QQRPVPESQLLPGQR	2	QQRPVPESQLLPGQR2	1500.35	2623.58	1789.19
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	QQRPVPESQLLPGQR	QQRPVPESQLLPGQR	3	QQRPVPESQLLPGQR3	170421	225887	207553
A0A8I6A263	A0A8I6A263	A0A8I6A263_RAT	Aimp1	Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	1	QQSAAASADSKPVDVSR	QQSAAASADSKPVDVSR	2	QQSAAASADSKPVDVSR2	2553.57		
A0A8I6A263	A0A8I6A263	A0A8I6A263_RAT	Aimp1	Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	1	QQSAAASADSKPVDVSR	QQSAAASADSKPVDVSR	3	QQSAAASADSKPVDVSR3	43217.4	33260	59882.8
P35446	P35446	SPON1_RAT	Spon1	Spondin-1	1	QQSDEVLTVIK	QQSDEVLTVIK	2	QQSDEVLTVIK2	2211.11		3205.81
Q08013	Q08013	SSRG_RAT	Ssr3	Translocon-associated protein subunit gamma	1	QQSEEDLLLQDFSR	QQSEEDLLLQDFSR	2	QQSEEDLLLQDFSR2	30661.3	36425.5	54774.2
Q08013	Q08013	SSRG_RAT	Ssr3	Translocon-associated protein subunit gamma	1	QQSEEDLLLQDFSR	QQSEEDLLLQDFSR	3	QQSEEDLLLQDFSR3	32065.7	39782.9	44279.3
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	QQSEGDSVIK	QQSEGDSVIK	2	QQSEGDSVIK2	12152	12143.1	7749.24
A0A8I6G6W8	A0A8I5Y276;A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	QQSEISAAVER	QQSEISAAVER	2	QQSEISAAVER2	14568.3	10273.1	11513.8
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	QQSEISTHSI	QQSEISTHSI	2	QQSEISTHSI2	163913	151935	172120
Q99MZ8	Q99MZ8	LASP1_RAT	Lasp1	LIM and SH3 domain protein 1	1	QQSELQSQVR	QQSELQSQVR	2	QQSELQSQVR2	275026	170707	224278
A0A8I6AH91	A0A8I6AH91	A0A8I6AH91_RAT	Pcbp1	Poly(rC) binding protein 1	1	QQSHFAMMHGGTGFAGIDSSSPEVK	QQSHFAMMHGGTGFAGIDSSSPEVK	3	QQSHFAMMHGGTGFAGIDSSSPEVK3	2557.99	4722.27	906.313
A0A8I6AH91	A0A8I6AH91	A0A8I6AH91_RAT	Pcbp1	Poly(rC) binding protein 1	1	QQSHFAMMHGGTGFAGIDSSSPEVK	QQSHFAMMHGGTGFAGIDSSSPEVK	4	QQSHFAMMHGGTGFAGIDSSSPEVK4	37900.2	41213.9	42725.9
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	QQSIKPGPELGGEFPVQDMK	QQSIKPGPELGGEFPVQDMK	3	QQSIKPGPELGGEFPVQDMK3	6425.87	7548.32	8933.31
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	QQSPGLGR	QQSPGLGR	2	QQSPGLGR2	56810.9	54487.9	47033.5
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	QQSPGLGRPIWLQIAESAYR	QQSPGLGRPIWLQIAESAYR	3	QQSPGLGRPIWLQIAESAYR3	16363.6	20647.2	14988.5
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	QQSQVLDAMQDSFTR	QQSQVLDAMQDSFTR	2	QQSQVLDAMQDSFTR2	6.58689e+06	6.57499e+06	6.8637e+06
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	QQSQVLDAMQDSFTR	QQSQVLDAMQDSFTR	3	QQSQVLDAMQDSFTR3	2.65433e+06	2.69211e+06	2.83728e+06
O35806	O35806	LTBP2_RAT	Ltbp2	Latent-transforming growth factor beta-binding protein 2	1	QQSSGPPPGAAER	QQSSGPPPGAAER	2	QQSSGPPPGAAER2	7360.09		5182.58
F7EYC4	F7EYC4	F7EYC4_RAT	Tom1	Target of myb1 membrane trafficking protein	1	QQSTGAIPATQAR	QQSTGAIPATQAR	2	QQSTGAIPATQAR2	79124.5	70793	92765.4
A0A8I5ZYW3	A0A8I5ZYW3	A0A8I5ZYW3_RAT	Lsp1	Lymphocyte-specific protein 1	1	QQSWENEGTAEGSEPSPSESAEEK	QQSWENEGTAEGSEPSPSESAEEK	3	QQSWENEGTAEGSEPSPSESAEEK3	11031	16629.6	19612.6
D3ZER2	D3ZER2	BFSP2_RAT	Bfsp2	Phakinin	1	QQTEVVHVSQTQEEK	QQTEVVHVSQTQEEK	3	QQTEVVHVSQTQEEK3	217.233	2893.53	3748.78
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	QQTIILDDELIQWK	QQTIILDDELIQWK	2	QQTIILDDELIQWK2	13487.7	10912.6	6672.99
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	QQTNTLLNLVWR	QQTNTLLNLVWR	2	QQTNTLLNLVWR2	10973.6	21175.8	10867.7
Q5U1X1	Q5U1X1	ORN_RAT	Rexo2	Oligoribonuclease, mitochondrial	1	QQTPPGLCPLAGNSVHADK	QQTPPGLC(UniMod:4)PLAGNSVHADK	3	QQTPPGLC(UniMod:4)PLAGNSVHADK3	15510.5	18767.1	14201.9
Q5U1X1	Q5U1X1	ORN_RAT	Rexo2	Oligoribonuclease, mitochondrial	1	QQTPPGLCPLAGNSVHADKK	QQTPPGLC(UniMod:4)PLAGNSVHADKK	3	QQTPPGLC(UniMod:4)PLAGNSVHADKK3	12447.9	7313.86	5599.81
Q5U1X1	Q5U1X1	ORN_RAT	Rexo2	Oligoribonuclease, mitochondrial	1	QQTPPGLCPLAGNSVHADKK	QQTPPGLC(UniMod:4)PLAGNSVHADKK	4	QQTPPGLC(UniMod:4)PLAGNSVHADKK4	24644.6	28945.8	23454.3
A0A0G2K543	A0A0G2K543	A0A0G2K543_RAT	C2cd5	C2 calcium-dependent domain containing 5	1	QQTQSALEQR	QQTQSALEQR	2	QQTQSALEQR2	9084.07	9440.57	9465.02
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	QQTSEPVHILK	QQTSEPVHILK	3	QQTSEPVHILK3	11809.8	11513.2	19581.9
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	QQTSLFIAR	QQTSLFIAR	2	QQTSLFIAR2	61715.3	63037.1	65936
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	QQTVQLHVVSAISNLLK	QQTVQLHVVSAISNLLK	3	QQTVQLHVVSAISNLLK3	10078.1	2093.5	7312.3
P58751	P58751	RELN_RAT	Reln	Reelin	1	QQTWAIDNVYIGDGCLDMCSGHGR	QQTWAIDNVYIGDGC(UniMod:4)LDMC(UniMod:4)SGHGR	3	QQTWAIDNVYIGDGC(UniMod:4)LDMC(UniMod:4)SGHGR3	18132.1	24805.2	29070.8
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	QQVADLTAQLHELNR	QQVADLTAQLHELNR	3	QQVADLTAQLHELNR3	57774.1	35880.9	56598.6
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	QQVADLTAQLHELNRR	QQVADLTAQLHELNRR	3	QQVADLTAQLHELNRR3	37047.5	44924.1	33596.8
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	QQVADLTAQLHELNRR	QQVADLTAQLHELNRR	4	QQVADLTAQLHELNRR4	146052	204761	183497
A0A8I6A263	A0A8I6A263	A0A8I6A263_RAT	Aimp1	Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	1	QQVALLK	QQVALLK	2	QQVALLK2	18625.3	15143.2	23488.2
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	QQVAPMDDETGK	QQVAPMDDETGK	2	QQVAPMDDETGK2	434942	472574	457929
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	QQVAPMDDETGKELVLALYDYQEK	QQVAPMDDETGKELVLALYDYQEK	3	QQVAPMDDETGKELVLALYDYQEK3	33442.5	43546.2	52564.9
Q99P39	Q99P39	NFS1_RAT	Nfs1	Cysteine desulfurase	1	QQVASLIGADPR	QQVASLIGADPR	2	QQVASLIGADPR2	7596.65	6969.13	7189.86
A0A8I5ZZT4	A0A8I5ZZT4	A0A8I5ZZT4_RAT	Pstpip2	Proline-serine-threonine phosphatase-interacting protein 2	1	QQVDNVAQCHIQLAQTLR	QQVDNVAQC(UniMod:4)HIQLAQTLR	3	QQVDNVAQC(UniMod:4)HIQLAQTLR3	3443.99	7147.75	15604.3
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QQVEAAETIK	QQVEAAETIK	2	QQVEAAETIK2	6319.8	5890.53	2511.87
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	QQVEQFAR	QQVEQFAR	2	QQVEQFAR2	32564.7	35412	29968.1
D4A3I5	D4A3I5	D4A3I5_RAT	Fhip2a	FHF complex subunit HOOK interacting protein 2A	1	QQVLVFYTK	QQVLVFYTK	2	QQVLVFYTK2	65180.4	86201.7	88325
D3ZEJ2	D3ZEJ2	D3ZEJ2_RAT	Mcur1	Mitochondrial calcium uniporter regulator 1	1	QQVMDEVTK	QQVMDEVTK	2	QQVMDEVTK2	17863	13038.9	16987
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	QQVQELLDELDEQK	QQVQELLDELDEQK	2	QQVQELLDELDEQK2	23728.7	20497.4	25793.8
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	QQVQELLDELDEQK	QQVQELLDELDEQK	3	QQVQELLDELDEQK3	12396.6	13389.7	18419.9
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QQVQFMLK	QQVQFMLK	2	QQVQFMLK2	20713.1	24218.4	25973.5
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	QQVQVVGLQER	QQVQVVGLQER	2	QQVQVVGLQER2	207290	246301	219434
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	QQVQVVGLQER	QQVQVVGLQER	3	QQVQVVGLQER3	12308.8	17232.2	
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	QQVSEVLK	QQVSEVLK	2	QQVSEVLK2	10457.4		7512.93
A0A0G2K762	A0A0G2K762	A0A0G2K762_RAT	Abcf2	ATP binding cassette subfamily F member 2	1	QQVSPIR	QQVSPIR	2	QQVSPIR2	10416.1	12142.8	14241.1
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	QQVSTLK	QQVSTLK	1	QQVSTLK1	1213.88	3784.28	2336.61
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	QQVSTLK	QQVSTLK	2	QQVSTLK2	206317	285930	285756
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	QQVTEIIFVLK	QQVTEIIFVLK	2	QQVTEIIFVLK2	5063.44	10632.6	3906.69
Q08850	Q08850	STX4_RAT	Stx4	Syntaxin-4	1	QQVTILATPLPEESMK	QQVTILATPLPEESMK	2	QQVTILATPLPEESMK2	35250.5	34719.6	36205.3
Q08850	Q08850	STX4_RAT	Stx4	Syntaxin-4	1	QQVTILATPLPEESMK	QQVTILATPLPEESMK	3	QQVTILATPLPEESMK3	13249.3	11002.1	19609.3
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	QQVVSVEEALLATGQWK	QQVVSVEEALLATGQWK	2	QQVVSVEEALLATGQWK2	3.10448e+06	2.93746e+06	2.82052e+06
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	QQVVSVEEALLATGQWK	QQVVSVEEALLATGQWK	3	QQVVSVEEALLATGQWK3	383390	384033	390648
B3DMA2	B3DMA2	ACD11_RAT	Acad11	Acyl-CoA dehydrogenase family member 11	1	QQWLEPLLR	QQWLEPLLR	2	QQWLEPLLR2	25483.5	29954.6	28129.6
D3ZAZ0	D3ZAZ0	D3ZAZ0_RAT	Eif3m	Eukaryotic translation initiation factor 3 subunit M	1	QQWQQLYDTLNAWK	QQWQQLYDTLNAWK	2	QQWQQLYDTLNAWK2	32302	37651.3	32757.9
D3ZAZ0	D3ZAZ0	D3ZAZ0_RAT	Eif3m	Eukaryotic translation initiation factor 3 subunit M	1	QQWQQLYDTLNAWK	QQWQQLYDTLNAWK	3	QQWQQLYDTLNAWK3	21573	29263	22424.6
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	QQWVDAIEQHK	QQWVDAIEQHK	2	QQWVDAIEQHK2		4736.11	1674.73
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	QQWVDAIEQHK	QQWVDAIEQHK	3	QQWVDAIEQHK3	29506.7	26337.5	32666.1
A4V8B4	A4V8B4	SAV1_RAT	Sav1	Protein salvador homolog 1	1	QQWYAQHHGK	QQWYAQHHGK	2	QQWYAQHHGK2	3080.36	3200.39	1424.03
A4V8B4	A4V8B4	SAV1_RAT	Sav1	Protein salvador homolog 1	1	QQWYAQHHGK	QQWYAQHHGK	3	QQWYAQHHGK3	17068.3	14320.2	16654.6
Q99MS0	Q99MS0	S14L2_RAT	Sec14l2	SEC14-like protein 2	1	QQYEHSVQISR	QQYEHSVQISR	3	QQYEHSVQISR3	15165.7	14999.6	15731.3
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	QQYEQCMDLQLFYR	QQYEQC(UniMod:4)MDLQLFYR	2	QQYEQC(UniMod:4)MDLQLFYR2	24354.2	17992.4	17262.8
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	QQYEQCMDLQLFYR	QQYEQC(UniMod:4)MDLQLFYR	3	QQYEQC(UniMod:4)MDLQLFYR3	39770.6	40614.9	39408.6
P31000	P31000	VIME_RAT	Vim	Vimentin	1	QQYESVAAK	QQYESVAAK	2	QQYESVAAK2	6859.64	8970.99	4014.08
P21913	P21913	SDHB_RAT	Sdhb	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial	1	QQYLQSIEDR	QQYLQSIEDR	2	QQYLQSIEDR2	37253.9	27113.5	40690.7
P21913	P21913	SDHB_RAT	Sdhb	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial	1	QQYLQSIEDREK	QQYLQSIEDREK	3	QQYLQSIEDREK3	30691.9	22936	23192.5
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	QQYNVTYVVK	QQYNVTYVVK	2	QQYNVTYVVK2	3656.46		
D3ZQI6	D3ZQI6	D3ZQI6_RAT	Xpo4	Exportin 4	1	QQYWTEVLQPLQQR	QQYWTEVLQPLQQR	2	QQYWTEVLQPLQQR2	4054.94		4659.34
P08649	P08649	CO4_RAT	C4	Complement C4	1	QRAACGQLNDFLQEYSSQGCQV	QRAAC(UniMod:4)GQLNDFLQEYSSQGC(UniMod:4)QV	3	QRAAC(UniMod:4)GQLNDFLQEYSSQGC(UniMod:4)QV3	6520.78	17610.9	7149.26
D3ZCK4	D3ZCK4	D3ZCK4_RAT	Def6	DEF6 guanine nucleotide exchange factor	1	QRADEDVEAAQR	QRADEDVEAAQR	3	QRADEDVEAAQR3	7716.68	9179.83	11117.4
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	QRAECLEELGCLIESYGMNVCQPTPGK	QRAEC(UniMod:4)LEELGC(UniMod:4)LIESYGMNVC(UniMod:4)QPTPGK	4	QRAEC(UniMod:4)LEELGC(UniMod:4)LIESYGMNVC(UniMod:4)QPTPGK4	6467.05	7063.41	8219.73
D3ZH41	D3ZH41	D3ZH41_RAT	Ckap4	Cytoskeleton-associated protein 4	1	QRDELGQGLQGVEQK	QRDELGQGLQGVEQK	4	QRDELGQGLQGVEQK4	6989.16		
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	QRDELIEK	QRDELIEK	2	QRDELIEK2	48456.1	46450.2	67330.1
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	QRDETALQLSVSQEQVK	QRDETALQLSVSQEQVK	3	QRDETALQLSVSQEQVK3	6729.47	11849.9	13505.4
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	QREEAERQEEELR	QREEAERQEEELR	3	QREEAERQEEELR3	46709.8	56227.7	36850.1
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	QREEAERQEEELR	QREEAERQEEELR	4	QREEAERQEEELR4	33025.5	36860.1	31944.9
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	QREEESQQQAVLAQECR	QREEESQQQAVLAQEC(UniMod:4)R	3	QREEESQQQAVLAQEC(UniMod:4)R3	24150.6	29579.7	30504.3
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	QREEMLEK	QREEMLEK	2	QREEMLEK2	9533.61	7380.98	7279.91
Q29RW1	P12847;A0A8I6AIQ9;Q29RW1	MYH4_RAT	Myh4	Myosin-4	0	QREEQAEPDGTEVADK	QREEQAEPDGTEVADK	3	QREEQAEPDGTEVADK3	6046.83	4599.33	9034.41
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	QREEVTAIVK	QREEVTAIVK	2	QREEVTAIVK2	4286.01	5953.65	
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	QREEVTAIVK	QREEVTAIVK	3	QREEVTAIVK3	50660.6	52241.8	45748.7
Q5I0E7	Q5I0E7	TMED9_RAT	Tmed9	Transmembrane emp24 domain-containing protein 9	1	QREEYQPATPGLGMFVEVK	QREEYQPATPGLGMFVEVK	3	QREEYQPATPGLGMFVEVK3	20101	8712.96	9015.42
Q5I0E7	Q5I0E7	TMED9_RAT	Tmed9	Transmembrane emp24 domain-containing protein 9	1	QREEYQPATPGLGMFVEVKDPEDK	QREEYQPATPGLGMFVEVKDPEDK	3	QREEYQPATPGLGMFVEVKDPEDK3	38766	39560.7	42914.4
Q5I0E7	Q5I0E7	TMED9_RAT	Tmed9	Transmembrane emp24 domain-containing protein 9	1	QREEYQPATPGLGMFVEVKDPEDK	QREEYQPATPGLGMFVEVKDPEDK	4	QREEYQPATPGLGMFVEVKDPEDK4	207901	210073	186760
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	QREITISGDK	QREITISGDK	2	QREITISGDK2	14068.7	11303.5	10836
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	QREITISGDK	QREITISGDK	3	QREITISGDK3	401945	474341	502336
P02661	P02661	CASA1_RAT	Csn1s1	Alpha-S1-casein	1	QRELLTEQDNEIK	QRELLTEQDNEIK	3	QRELLTEQDNEIK3	6561	6016.73	11361.8
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	QRENGCFQQSGSLLNNAMK	QRENGC(UniMod:4)FQQSGSLLNNAMK	3	QRENGC(UniMod:4)FQQSGSLLNNAMK3	106694	136429	91710.3
D4A7L4	D4A7L4	D4A7L4_RAT	Ndufb11	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial	1	QREPTMVWQEDPEPEDENLYAK	QREPTMVWQEDPEPEDENLYAK	3	QREPTMVWQEDPEPEDENLYAK3	16915.2	19792.9	9994.45
Q6TMG5	Q6TMG5	NEMO_RAT	Ikbkg	NF-kappa-B essential modulator	1	QREQALEDLEHLKK	QREQALEDLEHLKK	4	QREQALEDLEHLKK4	2679.73	1422.1	4727.26
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	QREVEGQEEELK	QREVEGQEEELK	3	QREVEGQEEELK3	8320.67		5094.27
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	QREVEGQEEELKQR	QREVEGQEEELKQR	3	QREVEGQEEELKQR3	3728.87	2790.02	8940.44
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	QREVEGQEEELKQR	QREVEGQEEELKQR	4	QREVEGQEEELKQR4	24771.1	22678.7	27383
D3ZWA8	D3ZWA8	D3ZWA8_RAT	Appl1	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1	1	QRFPLGGDDEVMSSTLQQFSK	QRFPLGGDDEVMSSTLQQFSK	3	QRFPLGGDDEVMSSTLQQFSK3	8249.56	8635.76	7476.87
Q5XIP9	Q5XIP9	TMM43_RAT	Tmem43	Transmembrane protein 43	1	QRGDQLIPYSTK	QRGDQLIPYSTK	3	QRGDQLIPYSTK3	17415.3	23705.4	21972.8
Q6IE64	Q6IE64	C1RL_RAT	C1rl	Complement C1r subcomponent-like protein	1	QRGEEVPECVPVCGR	QRGEEVPEC(UniMod:4)VPVC(UniMod:4)GR	3	QRGEEVPEC(UniMod:4)VPVC(UniMod:4)GR3	6255.74	5845.68	11669.3
P62994	P62994	GRB2_RAT	Grb2	Growth factor receptor-bound protein 2	1	QRHDGAFLIR	QRHDGAFLIR	3	QRHDGAFLIR3	43197.8	40815	55032.3
P31977	P31977;Q5PQK5	EZRI_RAT	Ezr	Ezrin	0	QRIDEFEAM	QRIDEFEAM	2	QRIDEFEAM2	9451.22		
O35763	O35763	MOES_RAT	Msn	Moesin	1	QRIDEFESM	QRIDEFESM	2	QRIDEFESM2	88255.8	70257	90119.8
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	QRIDFTPSER	QRIDFTPSER	3	QRIDFTPSER3	16539.7	14355.4	20572.2
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	QRIDYANLTGISVSSLSDSLFVLHVQR	QRIDYANLTGISVSSLSDSLFVLHVQR	4	QRIDYANLTGISVSSLSDSLFVLHVQR4	7582.67	5486.15	
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	QRLDEDDIVGSDK	QRLDEDDIVGSDK	3	QRLDEDDIVGSDK3	16548.6	15250.1	17411.1
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	QRLDLLPFYAR	QRLDLLPFYAR	3	QRLDLLPFYAR3	15302.8	13470.2	11594.6
Q05096	Q05096	MYO1B_RAT	Myo1b	Unconventional myosin-Ib	1	QRLEDLATLIQK	QRLEDLATLIQK	3	QRLEDLATLIQK3	5752.91	7459.24	4843.56
A0A8I5ZK60	A0A8I5ZK60	A0A8I5ZK60_RAT	Ccer2	Coiled-coil glutamate-rich protein 2	1	QRLEGAGDLQK	QRLEGAGDLQK	3	QRLEGAGDLQK3	7001.4	14996.8	9857.45
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	QRLEMNLGLQK	QRLEMNLGLQK	3	QRLEMNLGLQK3	44751.9	51179.7	42439.9
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	QRLPAPDEKI	QRLPAPDEKI	3	QRLPAPDEKI3	25248.5	32875.7	26698
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	QRLQALDTGWNELHK	QRLQALDTGWNELHK	3	QRLQALDTGWNELHK3	4382.61	4431.34	
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	QRLQALDTGWNELHK	QRLQALDTGWNELHK	4	QRLQALDTGWNELHK4	3983.72	5655.15	6551.73
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	QRNESCGGAYGLHGACDR	QRNESC(UniMod:4)GGAYGLHGAC(UniMod:4)DR	4	QRNESC(UniMod:4)GGAYGLHGAC(UniMod:4)DR4	3099.99	3454.27	6622.01
F7FQB8	F7FQB8	F7FQB8_RAT	Kpna4	Karyopherin subunit alpha 4	1	QRNEVVVELR	QRNEVVVELR	3	QRNEVVVELR3	36819.8	44429.5	44517.9
F7FQB8	F7FQB8	F7FQB8_RAT	Kpna4	Karyopherin subunit alpha 4	1	QRNEVVVELRK	QRNEVVVELRK	3	QRNEVVVELRK3	4260.36	1290.99	6041.89
D3ZXD8	D3ZXD8	TM245_RAT	Tmem245	Transmembrane protein 245	1	QRPEMGTFLR	QRPEMGTFLR	3	QRPEMGTFLR3	35450.6	40770.7	33742.9
A0A8I6A6W7	A0A8I6A6W7	A0A8I6A6W7_RAT	ENSRNOG00000070729	Ig-like domain-containing protein	1	QRPEQGLVWIGR	QRPEQGLVWIGR	3	QRPEQGLVWIGR3	41757.7	49377.3	42713.6
Q8R492	Q8R492	Q8R492_RAT	Fap	Fibroblast activation protein, alpha	1	QRPGDPPFQITYTGR	QRPGDPPFQITYTGR	3	QRPGDPPFQITYTGR3	19464.9	15282	8555.01
M0RE02	A0A8I5ZL34;M0RE02	M0RE02_RAT	ENSRNOG00000069071	Ig-like domain-containing protein	0	QRPGQGLEWIGR	QRPGQGLEWIGR	2	QRPGQGLEWIGR2	8122.43	9430.67	7187.37
M0RE02	A0A8I5ZL34;M0RE02	M0RE02_RAT	ENSRNOG00000069071	Ig-like domain-containing protein	0	QRPGQGLEWIGR	QRPGQGLEWIGR	3	QRPGQGLEWIGR3	324178	300199	318548
P18395	P18395	CSDE1_RAT	Csde1	Cold shock domain-containing protein E1	1	QRPGQQIATCVR	QRPGQQIATC(UniMod:4)VR	3	QRPGQQIATC(UniMod:4)VR3	16472.5	12237.1	12636.3
D4A9Z2	D4A9Z2	D4A9Z2_RAT	Top3b	DNA topoisomerase	1	QRPLALNTVEMLR	QRPLALNTVEMLR	3	QRPLALNTVEMLR3	3524		4129.95
B5DF13	B5DF13	B5DF13_RAT	Trim59	Tripartite motif-containing 59	1	QRPLPEVQPVEIYPR	QRPLPEVQPVEIYPR	3	QRPLPEVQPVEIYPR3	5894.01	3723.31	7156.66
A0A8I6ACU2	A0A8I6ACU2	A0A8I6ACU2_RAT	Ubap2l	Ubiquitin associated protein 2-like	1	QRPQATAEQIR	QRPQATAEQIR	3	QRPQATAEQIR3	23101.6	18235.1	28988.3
P55146	P55146	TYRO3_RAT	Tyro3	Tyrosine-protein kinase receptor TYRO3	1	QRPSFTCLR	QRPSFTC(UniMod:4)LR	3	QRPSFTC(UniMod:4)LR3	14111.7	8461.51	10489.7
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	QRPSLVTQCLR	QRPSLVTQC(UniMod:4)LR	3	QRPSLVTQC(UniMod:4)LR3	72493.4	75167.9	74409.9
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	QRPTIGLFTQCSGPASLR	QRPTIGLFTQC(UniMod:4)SGPASLR	3	QRPTIGLFTQC(UniMod:4)SGPASLR3	13005.9	10858	16833.2
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	QRQDVFGEGSQER	QRQDVFGEGSQER	3	QRQDVFGEGSQER3	16977.8	11183.6	19895
P04916	P04916	RET4_RAT	Rbp4	Retinol-binding protein 4	1	QRQEELCLER	QRQEELC(UniMod:4)LER	3	QRQEELC(UniMod:4)LER3	119889	94459	131359
P51794	P51794	CLCN4_RAT	Clcn4	H(+)/Cl(-) exchange transporter 4	1	QRQEGIVSNSIMYFTEEPPELPANSPHPLK	QRQEGIVSNSIMYFTEEPPELPANSPHPLK	4	QRQEGIVSNSIMYFTEEPPELPANSPHPLK4	16190.1	19908.8	21642.7
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QRQELEK	QRQELEK	2	QRQELEK2			27716.9
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	QRTANLGAGAAQPLRDR	QRTANLGAGAAQPLRDR	3	QRTANLGAGAAQPLRDR3	4042.69		
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	QRTANLGAGAAQPLRDR	QRTANLGAGAAQPLRDR	4	QRTANLGAGAAQPLRDR4	129546	117150	189649
P08644	P08644	RASK_RAT	Kras	GTPase KRas	1	QRVEDAFYTLVR	QRVEDAFYTLVR	3	QRVEDAFYTLVR3	10158.6	8871.57	6126.77
A0A8I6AEI3	A0A8I6AEI3	A0A8I6AEI3_RAT	Wwox	WW domain-containing oxidoreductase	1	QRYDGSTTAMEILQGR	QRYDGSTTAMEILQGR	3	QRYDGSTTAMEILQGR3	3239.85	2983.82	9661.44
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QRYEILTPNSIPK	QRYEILTPNSIPK	2	QRYEILTPNSIPK2	338843	472236	465468
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QRYEILTPNSIPK	QRYEILTPNSIPK	3	QRYEILTPNSIPK3	4.09193e+06	5.35127e+06	5.299e+06
Q5FVM3	Q5FVM3	RETR1_RAT	Retreg1	Reticulophagy regulator 1	1	QSAAGLSLPLK	QSAAGLSLPLK	2	QSAAGLSLPLK2	59419.2	64172.1	60154.8
P18484	P18484;A0A8I6A4J2	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	0	QSAALCLLR	QSAALC(UniMod:4)LLR	2	QSAALC(UniMod:4)LLR2	34997.7	25805.2	29556.2
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	QSAAQQGAFLR	QSAAQQGAFLR	2	QSAAQQGAFLR2	25052.9	25569.4	21594.1
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	QSAEDSSHQISALVLR	QSAEDSSHQISALVLR	3	QSAEDSSHQISALVLR3	5705.15	8835.95	10612.4
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	QSAEVENMMISVER	QSAEVENMMISVER	2	QSAEVENMMISVER2	6325.11	5977.46	4479.09
P08699	P08699	LEG3_RAT	Lgals3	Galectin-3	1	QSAFPFESGK	QSAFPFESGK	2	QSAFPFESGK2	82089.8	101653	96125.7
D3ZGB8	D3ZGB8	D3ZGB8_RAT	Cilp	Cartilage intermediate layer protein	1	QSAFQYLQSTPAR	QSAFQYLQSTPAR	2	QSAFQYLQSTPAR2	11024.5	13501.1	11885.5
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	QSAGAANELLR	QSAGAANELLR	2	QSAGAANELLR2	6073.39	6480.98	6451.28
Q5XIA1	Q5XIA1	NCLN_RAT	Ncln	BOS complex subunit NCLN	1	QSAGAVVIILPR	QSAGAVVIILPR	2	QSAGAVVIILPR2	16608.7	19082.4	14537.5
D4ACD2	D4ACD2	D4ACD2_RAT	Bach1	BTB domain and CNC homolog 1	1	QSAGISDFCQQMSDK	QSAGISDFC(UniMod:4)QQMSDK	2	QSAGISDFC(UniMod:4)QQMSDK2	1622.13	4555.91	1977.88
Q9QXY4	Q9QXY4	OGFR_RAT	Ogfr	Opioid growth factor receptor	1	QSALDYFLFAVR	QSALDYFLFAVR	2	QSALDYFLFAVR2	7992.38	9143.15	11971.8
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QSALEAELR	QSALEAELR	2	QSALEAELR2	265158	80679.2	167947
Q4KLH3	Q4KLH3	OGRL1_RAT	Ogfrl1	Opioid growth factor receptor-like protein 1	1	QSALEYFVYTIR	QSALEYFVYTIR	2	QSALEYFVYTIR2	17088.9	10465.4	
Q4KLH3	Q4KLH3	OGRL1_RAT	Ogfrl1	Opioid growth factor receptor-like protein 1	1	QSALEYFVYTIR	QSALEYFVYTIR	3	QSALEYFVYTIR3	6321.58	5630.66	3035.41
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	QSANAYPDLR	QSANAYPDLR	2	QSANAYPDLR2	1.0198e+07	1.2065e+07	1.16551e+07
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	QSAQLTALAAQQQASGK	QSAQLTALAAQQQASGK	2	QSAQLTALAAQQQASGK2	7099.1	9795.49	10209.4
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	QSAQLTALAAQQQASGK	QSAQLTALAAQQQASGK	3	QSAQLTALAAQQQASGK3	2037.87	4995.87	5346.63
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	QSAQLTALAAQQQASGKEEK	QSAQLTALAAQQQASGKEEK	3	QSAQLTALAAQQQASGKEEK3	44053	34226.9	36283.8
A0A8I6A1D9	A0A8I6A1D9	A0A8I6A1D9_RAT	Use1	Vesicle transport protein USE1	1	QSASELDLVLQR	QSASELDLVLQR	2	QSASELDLVLQR2	50749.3	47562.3	55063.2
A0A8I6A9E8	A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	1	QSASTLQGEPR	QSASTLQGEPR	2	QSASTLQGEPR2	21505.3	8890.75	6749.68
B0LT89	B0LT89	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	1	QSAYDSK	QSAYDSK	2	QSAYDSK2			13688.3
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	QSCELSPSK	QSC(UniMod:4)ELSPSK	2	QSC(UniMod:4)ELSPSK2	8363.03	9257.33	8765.23
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	QSCGHSCPFSSTAASK	QSC(UniMod:4)GHSC(UniMod:4)PFSSTAASK	3	QSC(UniMod:4)GHSC(UniMod:4)PFSSTAASK3	13440	11412	10081.2
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	QSCSILISTMNK	QSC(UniMod:4)SILISTMNK	2	QSC(UniMod:4)SILISTMNK2	9717.17	21828.8	25636
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	QSCTLFFSWHTPLACEQATECTVR	QSC(UniMod:4)TLFFSWHTPLAC(UniMod:4)EQATEC(UniMod:4)TVR	3	QSC(UniMod:4)TLFFSWHTPLAC(UniMod:4)EQATEC(UniMod:4)TVR3	10510.4	7613.03	3869.05
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	QSCWDLER	QSC(UniMod:4)WDLER	2	QSC(UniMod:4)WDLER2	8646.96	6814.4	4324.32
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	QSDDILTVLK	QSDDILTVLK	2	QSDDILTVLK2	20046.7	22480.7	28323.5
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	QSDENLDLAR	QSDENLDLAR	2	QSDENLDLAR2	18347.9	22824.3	29188.6
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	QSDGLCR	QSDGLC(UniMod:4)R	2	QSDGLC(UniMod:4)R2	166704	173854	183510
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	QSDGSVLK	QSDGSVLK	2	QSDGSVLK2	7509.5	8134.19	21044.6
A0A8I6A0B7	A0A8I6A0B7	A0A8I6A0B7_RAT	Nipsnap3a	Nipsnap homolog 3B	1	QSDGTLYEFR	QSDGTLYEFR	2	QSDGTLYEFR2	121655	125386	128520
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	QSDQTIK	QSDQTIK	1	QSDQTIK1			6240.15
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	QSDQTIK	QSDQTIK	2	QSDQTIK2			51502
P31211	P31211	CBG_RAT	Serpina6	Corticosteroid-binding globulin	1	QSDTGLEMNMGNAMFLLQK	QSDTGLEMNMGNAMFLLQK	3	QSDTGLEMNMGNAMFLLQK3	22013.1	12030.3	10227.4
P51111	P51111	HD_RAT	Htt	Huntingtin	1	QSDTSGPVTASK	QSDTSGPVTASK	2	QSDTSGPVTASK2	22768.1	27469.7	27085.8
Q62751	Q62751	IREB2_RAT	Ireb2	Iron-responsive element-binding protein 2	1	QSDTVSVR	QSDTVSVR	2	QSDTVSVR2		10880.2	9280.66
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	QSEDLGSQFTEIFIK	QSEDLGSQFTEIFIK	2	QSEDLGSQFTEIFIK2	4662.46	18172.9	6117.89
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	QSEDLGSQFTEIFIK	QSEDLGSQFTEIFIK	3	QSEDLGSQFTEIFIK3		2904.8	
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	QSEGDGPFSIDAHTGFLK	QSEGDGPFSIDAHTGFLK	3	QSEGDGPFSIDAHTGFLK3	5016.27	4862.38	11295.8
B5DEH2	B5DEH2	ERLN2_RAT	Erlin2	Erlin-2	1	QSEGLSDK	QSEGLSDK	2	QSEGLSDK2			30204.1
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	QSEGLTK	QSEGLTK	1	QSEGLTK1	6049.89		4013.4
Q5RKH6	Q5RKH6	OS9_RAT	Os9	Protein OS-9	1	QSELESNYR	QSELESNYR	2	QSELESNYR2	11838.6	12023.6	11264.3
B0BNA9	B0BNA9	CNO11_RAT	Cnot11	CCR4-NOT transcription complex subunit 11	1	QSELPTQSK	QSELPTQSK	2	QSELPTQSK2	1242.95		
Q5BJT7	Q5BJT7	CCD93_RAT	Ccdc93	Coiled-coil domain-containing protein 93	1	QSELSAEESPEK	QSELSAEESPEK	2	QSELSAEESPEK2	6763.24	5890.97	6323.63
P86182	P86182	CCD22_RAT	Ccdc22	Coiled-coil domain-containing protein 22	1	QSELSVAEQEQALR	QSELSVAEQEQALR	2	QSELSVAEQEQALR2		2814.41	5294.75
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	QSEMLVEGFK	QSEMLVEGFK	2	QSEMLVEGFK2	15005.3	12864.4	17129.9
P07872	P07872	ACOX1_RAT	Acox1	Peroxisomal acyl-coenzyme A oxidase 1	1	QSEPEPQILDFQTQQYK	QSEPEPQILDFQTQQYK	3	QSEPEPQILDFQTQQYK3	4505.49	7377.06	4949.11
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	QSEPFFK	QSEPFFK	2	QSEPFFK2	119203	45964	54680.8
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	QSEPQEITLPSPDR	QSEPQEITLPSPDR	2	QSEPQEITLPSPDR2	321764	365761	345489
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	QSEPQEITLPSPDR	QSEPQEITLPSPDR	3	QSEPQEITLPSPDR3	46663.2	49049.5	65676.6
Q5HZY0	Q5HZY0	UBXN4_RAT	Ubxn4	UBX domain-containing protein 4	1	QSESSVSTPSASFEPDICESAESR	QSESSVSTPSASFEPDIC(UniMod:4)ESAESR	3	QSESSVSTPSASFEPDIC(UniMod:4)ESAESR3	14676.8	5358.28	9531.09
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QSEVESIQEVLR	QSEVESIQEVLR	2	QSEVESIQEVLR2	35164.4	28046.7	29773.6
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QSEVESIQEVLR	QSEVESIQEVLR	3	QSEVESIQEVLR3	5012.13	5645.75	4384.29
Q5RJR2	Q5RJR2;A0A8I6GGS8	TWF1_RAT	Twf1	Twinfilin-1	0	QSFAKPK	QSFAKPK	2	QSFAKPK2			8292.77
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	QSFALEQLK	QSFALEQLK	2	QSFALEQLK2	18342.4	17863	22165.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	QSFDLSIK	QSFDLSIK	1	QSFDLSIK1	5330.17	7515.81	6973.67
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	QSFDLSIK	QSFDLSIK	2	QSFDLSIK2	417481	544343	490833
A0A8I6ASK6	A0A8I6ASK6	A0A8I6ASK6_RAT	Fcrl1	Fc receptor-like 1	1	QSFGPGTGR	QSFGPGTGR	2	QSFGPGTGR2	2.26221e+06	1.86014e+06	2.14727e+06
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	QSFGYFPK	QSFGYFPK	2	QSFGYFPK2	20783.7	23034.5	11299.8
D3Z8L7	D3Z8L7	RRAS_RAT	Rras	Ras-related protein R-Ras	1	QSFIEVSK	QSFIEVSK	2	QSFIEVSK2	63658.3	57726.9	49961.4
A0A0G2JYX9	A0A0G2JYX9	A0A0G2JYX9_RAT	Irak1	Interleukin-1 receptor-associated kinase 1	1	QSFLTEVEQLSR	QSFLTEVEQLSR	2	QSFLTEVEQLSR2	5417.07	3409.94	4771.44
B2RZD7	B2RZD7	LYRM9_RAT	Lyrm9	LYR motif-containing protein 9	1	QSFQVHSDEDNPER	QSFQVHSDEDNPER	3	QSFQVHSDEDNPER3	5350.93		5093.76
Q99MZ8	Q99MZ8	LASP1_RAT	Lasp1	LIM and SH3 domain protein 1	1	QSFTMVADTPENLR	QSFTMVADTPENLR	2	QSFTMVADTPENLR2	259321	207090	190978
Q99MZ8	Q99MZ8	LASP1_RAT	Lasp1	LIM and SH3 domain protein 1	1	QSFTMVADTPENLR	QSFTMVADTPENLR	3	QSFTMVADTPENLR3	25493.8	13602	21831.5
Q8K3X0	Q8K3X0	CASC3_RAT	Casc3	Protein CASC3	1	QSGDGQESTEPVENK	QSGDGQESTEPVENK	2	QSGDGQESTEPVENK2	1758.88		
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	QSGESIDIITR	QSGESIDIITR	2	QSGESIDIITR2	31087.3	32284	29067.9
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	QSGILGPIIK	QSGILGPIIK	2	QSGILGPIIK2	9.31365e+06	1.10916e+07	1.05139e+07
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	QSGPGLHNQDHFYQQVTK	QSGPGLHNQDHFYQQVTK	4	QSGPGLHNQDHFYQQVTK4	5686.91	326.035	
Q4G063	Q4G063	CREL2_RAT	Creld2	Protein disulfide isomerase Creld2	1	QSGQCADIDECSLEEK	QSGQC(UniMod:4)ADIDEC(UniMod:4)SLEEK	2	QSGQC(UniMod:4)ADIDEC(UniMod:4)SLEEK2	45541.6	36964.7	43025.3
Q4G063	Q4G063	CREL2_RAT	Creld2	Protein disulfide isomerase Creld2	1	QSGQCADIDECSLEEK	QSGQC(UniMod:4)ADIDEC(UniMod:4)SLEEK	3	QSGQC(UniMod:4)ADIDEC(UniMod:4)SLEEK3	10839	8761.86	13362.4
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	QSGQEVGLEDSAEEK	QSGQEVGLEDSAEEK	2	QSGQEVGLEDSAEEK2	13910.8	19154.8	22420.8
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	QSGQTDPLQK	QSGQTDPLQK	2	QSGQTDPLQK2	17175.7	17613.8	18565.9
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	QSGSQEALVLLPGETR	QSGSQEALVLLPGETR	2	QSGSQEALVLLPGETR2	16558.6	14180.6	13631.3
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	QSGVKEEHSFTVMEFVLPR	QSGVKEEHSFTVMEFVLPR	3	QSGVKEEHSFTVMEFVLPR3	502603	414613	325849
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	QSGVKEEHSFTVMEFVLPR	QSGVKEEHSFTVMEFVLPR	4	QSGVKEEHSFTVMEFVLPR4	3.12102e+06	2.64068e+06	2.44468e+06
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	QSGVKEEHSFTVMEFVLPRFGVDVK	QSGVKEEHSFTVMEFVLPRFGVDVK	4	QSGVKEEHSFTVMEFVLPRFGVDVK4	12498.1	6817.22	
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	QSIAIDDCTFHQCVR	QSIAIDDC(UniMod:4)TFHQC(UniMod:4)VR	2	QSIAIDDC(UniMod:4)TFHQC(UniMod:4)VR2	2070.22		
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	QSIAIDDCTFHQCVR	QSIAIDDC(UniMod:4)TFHQC(UniMod:4)VR	3	QSIAIDDC(UniMod:4)TFHQC(UniMod:4)VR3	27562.3	31497.5	39011
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	QSICNLLCR	QSIC(UniMod:4)NLLC(UniMod:4)R	2	QSIC(UniMod:4)NLLC(UniMod:4)R2	1784.28	1480.75	1986.58
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	QSIDALK	QSIDALK	2	QSIDALK2	44071.8	42578.6	45602.5
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	QSIDALKDWFR	QSIDALKDWFR	3	QSIDALKDWFR3	7964.88	10379.3	18403.5
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	QSIDALKDWFRDEMQK	QSIDALKDWFRDEMQK	4	QSIDALKDWFRDEMQK4	3988.43	7752.82	3404.99
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	QSIDSFGQVSHPK	QSIDSFGQVSHPK	2	QSIDSFGQVSHPK2		1791.88	3737.63
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	QSIDSFGQVSHPK	QSIDSFGQVSHPK	3	QSIDSFGQVSHPK3	38348.3	27510.9	32214.2
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	QSIGQFHEGDAYVVK	QSIGQFHEGDAYVVK	3	QSIGQFHEGDAYVVK3	30506	29289.7	35954.8
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	QSIINPDWNFEK	QSIINPDWNFEK	2	QSIINPDWNFEK2	17987.5	20663.3	19008.1
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	QSILEGLNFSR	QSILEGLNFSR	2	QSILEGLNFSR2	77130.3	58717.2	41612.3
P54690	P54690	BCAT1_RAT	Bcat1	Branched-chain-amino-acid aminotransferase, cytosolic	1	QSILELGEEWGEFK	QSILELGEEWGEFK	2	QSILELGEEWGEFK2	2791.45		
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	QSIQPGSAVNR	QSIQPGSAVNR	2	QSIQPGSAVNR2	75666.7	90607.4	71927.8
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	QSITDELK	QSITDELK	2	QSITDELK2	43394.8	56894.1	30613.1
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	QSIWTDFSSR	QSIWTDFSSR	2	QSIWTDFSSR2	30207.2	30058.8	37051.4
P11348	P11348	DHPR_RAT	Qdpr	Dihydropteridine reductase	1	QSIWTSTISSHLATK	QSIWTSTISSHLATK	2	QSIWTSTISSHLATK2	4577.7		
P11348	P11348	DHPR_RAT	Qdpr	Dihydropteridine reductase	1	QSIWTSTISSHLATK	QSIWTSTISSHLATK	3	QSIWTSTISSHLATK3	19176.1	19808.7	12797.1
P63039	A0A8I5ZVK6;A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	QSKPVTTPEEIAQVATISANGDK	QSKPVTTPEEIAQVATISANGDK	3	QSKPVTTPEEIAQVATISANGDK3	25011.3	12902.7	30035
P32198	P32198	CPT1A_RAT	Cpt1a	Carnitine O-palmitoyltransferase 1, liver isoform	1	QSLDAVEK	QSLDAVEK	2	QSLDAVEK2	21547.4	28343.6	24052.2
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	QSLDFHLFYR	QSLDFHLFYR	3	QSLDFHLFYR3	15756.2	8147.76	15425.5
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	QSLDPTVDEVK	QSLDPTVDEVK	2	QSLDPTVDEVK2	3147.37	6153.07	5128.53
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	QSLDPTVDEVKK	QSLDPTVDEVKK	3	QSLDPTVDEVKK3	18658.1	19377.7	15506.3
Q6IFW6	Q6IFW6	K1C10_RAT	Krt10	Keratin, type I cytoskeletal 10	1	QSLEASLAETEGR	QSLEASLAETEGR	2	QSLEASLAETEGR2	185082	120730	138139
Q6IFW6	Q6IFW6	K1C10_RAT	Krt10	Keratin, type I cytoskeletal 10	1	QSLEASLAETEGR	QSLEASLAETEGR	3	QSLEASLAETEGR3	9075.33	9987.46	9577.45
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	QSLELTSDLSILQMTR	QSLELTSDLSILQMTR	2	QSLELTSDLSILQMTR2	26913	16919.1	17272.4
P62138	P62138;P63088;P62142	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	0	QSLETICLLLAYK	QSLETIC(UniMod:4)LLLAYK	2	QSLETIC(UniMod:4)LLLAYK2	25460.2	24352.5	28844
P62138	P62138;P63088;P62142	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	0	QSLETICLLLAYK	QSLETIC(UniMod:4)LLLAYK	3	QSLETIC(UniMod:4)LLLAYK3	4966.36	4853.51	2554.88
A0A8I5Y6A1	A0A8I5Y6A1	A0A8I5Y6A1_RAT	Ablim1	Actin-binding LIM protein 1	1	QSLGESPR	QSLGESPR	2	QSLGESPR2	18325	10368.9	11252.9
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	QSLGPEVR	QSLGPEVR	2	QSLGPEVR2	56742.4	71494.6	47286.7
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	QSLIDWNNPAIINK	QSLIDWNNPAIINK	2	QSLIDWNNPAIINK2	6287.85	1487.82	2622.68
O35854	O35854	BCAT2_RAT	Bcat2	Branched-chain-amino-acid aminotransferase, mitochondrial	1	QSLLDLAR	QSLLDLAR	2	QSLLDLAR2	89529.9	69873.4	80476
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	QSLLEAVASK	QSLLEAVASK	2	QSLLEAVASK2	15916.7	24098.3	31933.1
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	QSLLGSR	QSLLGSR	2	QSLLGSR2	131948	136213	148742
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	QSLNMTAVGITENVK	QSLNMTAVGITENVK	2	QSLNMTAVGITENVK2	10502.3	4959.88	5683.24
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	QSLPFVYQTIVK	QSLPFVYQTIVK	2	QSLPFVYQTIVK2	17003.9	12349.7	18436.3
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	QSLPVHFNIQQDCGHFLAEVPNR	QSLPVHFNIQQDC(UniMod:4)GHFLAEVPNR	4	QSLPVHFNIQQDC(UniMod:4)GHFLAEVPNR4	21008.7	10507.5	15040.6
F1M9Q3	F1M9Q3	F1M9Q3_RAT	Ltn1	E3 ubiquitin-protein ligase listerin	1	QSLPVQWLHR	QSLPVQWLHR	3	QSLPVQWLHR3	3590.4		
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	QSLQLPTR	QSLQLPTR	2	QSLQLPTR2	31537.2	24686.6	26875.8
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	QSLQLTFR	QSLQLTFR	2	QSLQLTFR2	14877.3	11659.6	15843.3
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	QSLQVFHIEELQTIGVQLHYQNR	QSLQVFHIEELQTIGVQLHYQNR	4	QSLQVFHIEELQTIGVQLHYQNR4	6832.75	7892.66	4729.68
M0RAD5	M0RAD5	M0RAD5_RAT	Clpp	ATP-dependent Clp protease proteolytic subunit	1	QSLQVIESAMER	QSLQVIESAMER	2	QSLQVIESAMER2	30013.4	33886.9	35983.3
P50282	P50282	MMP9_RAT	Mmp9	Matrix metalloproteinase-9	1	QSLRPALLMLQK	QSLRPALLMLQK	3	QSLRPALLMLQK3	11419.3	13051.3	13002.2
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	QSLSQMLSAK	QSLSQMLSAK	2	QSLSQMLSAK2	141474	173609	146795
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	QSLSSADNLEPDAQGHPVAAR	QSLSSADNLEPDAQGHPVAAR	3	QSLSSADNLEPDAQGHPVAAR3	12544.7	13798	18317.6
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	QSLSSIDR	QSLSSIDR	2	QSLSSIDR2	41413.8	43452.8	20439.6
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	QSLTADPVVK	QSLTADPVVK	2	QSLTADPVVK2	153228	224343	216526
B2RZ97	B2RZ97	B2RZ97_RAT	Kcmf1	E3 ubiquitin-protein ligase KCMF1	1	QSMESER	QSMESER	2	QSMESER2			24065.9
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	QSMVTLK	QSMVTLK	2	QSMVTLK2	4848.22	4363.71	6717.74
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	QSNAEGIHLER	QSNAEGIHLER	3	QSNAEGIHLER3	52006.4	52514.8	20557.8
Q5RKL5	Q5RKL5	STEA3_RAT	Steap3	Metalloreductase STEAP3	1	QSNAEYLASLFPACTVVK	QSNAEYLASLFPAC(UniMod:4)TVVK	3	QSNAEYLASLFPAC(UniMod:4)TVVK3		1710.23	3220.9
P35565	P35565	CALX_RAT	Canx	Calnexin	1	QSNAMEYK	QSNAMEYK	1	QSNAMEYK1	2642.72	2388.38	2079.92
P35565	P35565	CALX_RAT	Canx	Calnexin	1	QSNAMEYK	QSNAMEYK	2	QSNAMEYK2	256655	230415	272943
P35565	P35565	CALX_RAT	Canx	Calnexin	1	QSNAMEYKK	QSNAMEYKK	2	QSNAMEYKK2			6859.64
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	QSNDPMLSEFK	QSNDPMLSEFK	2	QSNDPMLSEFK2	30410.2	20501.4	18458.1
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	QSNELALVR	QSNELALVR	2	QSNELALVR2	47046.4	43858.5	53503.1
O70196	O70196	PPCE_RAT	Prep	Prolyl endopeptidase	1	QSNPLLIHVDTK	QSNPLLIHVDTK	3	QSNPLLIHVDTK3	1003.96		
A0A8I6ACY9	A0A8I6ACY9	A0A8I6ACY9_RAT	Vps37b	VPS37B subunit of ESCRT-I	1	QSNSASLETLLALLQAEGAK	QSNSASLETLLALLQAEGAK	3	QSNSASLETLLALLQAEGAK3	3070.04	2981.98	9092.17
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	QSNSEASLREEVLK	QSNSEASLREEVLK	3	QSNSEASLREEVLK3	22222.8	10562.1	17061.3
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	QSNSYDMFMR	QSNSYDMFMR	2	QSNSYDMFMR2	34915	25448.7	38717.3
Q62751	Q62751	IREB2_RAT	Ireb2	Iron-responsive element-binding protein 2	1	QSNVEVPFFPAR	QSNVEVPFFPAR	2	QSNVEVPFFPAR2	2179.62	5188.35	
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	QSNWVPR	QSNWVPR	2	QSNWVPR2	120468	156117	129652
A0A8I6GLU8	A0A8I6GLU8	A0A8I6GLU8_RAT	Tardbp	TAR DNA-binding protein 43	1	QSPDEPLR	QSPDEPLR	2	QSPDEPLR2	38729.8	41540	42568.8
Q32KJ6	Q32KJ6	GALNS_RAT	Galns	N-acetylgalactosamine-6-sulfatase	1	QSPFFLYWAIDATHAPVYASK	QSPFFLYWAIDATHAPVYASK	3	QSPFFLYWAIDATHAPVYASK3	7972.88	10975.5	6601.15
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	QSPGPCGSEVATVPETGR	QSPGPC(UniMod:4)GSEVATVPETGR	2	QSPGPC(UniMod:4)GSEVATVPETGR2	472194	1.10897e+08	256611
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	QSPGPCGSEVATVPETGR	QSPGPC(UniMod:4)GSEVATVPETGR	3	QSPGPC(UniMod:4)GSEVATVPETGR3	2.14303e+07	1.51478e+07	1.77252e+07
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	QSPGPCGSEVATVPETGRK	QSPGPC(UniMod:4)GSEVATVPETGRK	2	QSPGPC(UniMod:4)GSEVATVPETGRK2	1.32431e+06	1.04503e+06	1.0392e+06
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	QSPGPCGSEVATVPETGRK	QSPGPC(UniMod:4)GSEVATVPETGRK	3	QSPGPC(UniMod:4)GSEVATVPETGRK3	2.26735e+08	2.07117e+08	2.14008e+08
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	QSPGPCGSEVATVPETGRK	QSPGPC(UniMod:4)GSEVATVPETGRK	4	QSPGPC(UniMod:4)GSEVATVPETGRK4	446169	313296	252754
D3ZWD9	D3ZWD9	D3ZWD9_RAT	ENSRNOG00000068279	Ig-like domain-containing protein	1	QSPGQGLEWIGWIDPEYGSTDYAEK	QSPGQGLEWIGWIDPEYGSTDYAEK	3	QSPGQGLEWIGWIDPEYGSTDYAEK3	163737	131297	148498
Q62656	Q62656	PTPRZ_RAT	Ptprz1	Receptor-type tyrosine-protein phosphatase zeta	1	QSPINIDEDLTQVNVNLK	QSPINIDEDLTQVNVNLK	3	QSPINIDEDLTQVNVNLK3	24517.6	28749.9	29076.1
Q62656	Q62656	PTPRZ_RAT	Ptprz1	Receptor-type tyrosine-protein phosphatase zeta	1	QSPINIDEDLTQVNVNLKK	QSPINIDEDLTQVNVNLKK	3	QSPINIDEDLTQVNVNLKK3	20342.1	28448.9	10558.7
Q642G4	Q642G4	PEX14_RAT	Pex14	Peroxisomal membrane protein PEX14	1	QSPLATR	QSPLATR	2	QSPLATR2	31601.4	31235.8	30599.6
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	QSPLLIGSTK	QSPLLIGSTK	2	QSPLLIGSTK2	41370.1	33937.7	37223.3
Q2THW7	Q2THW7	ZDHC5_RAT	Zdhhc5	Palmitoyltransferase ZDHHC5	1	QSPPLAGREEEPGLGDSGIQSTPGSGHAPR	QSPPLAGREEEPGLGDSGIQSTPGSGHAPR	4	QSPPLAGREEEPGLGDSGIQSTPGSGHAPR4	9388.98	10901.2	6431.99
D4A7Z0	D4A7Z0	D4A7Z0_RAT	Wdtc1	WD and tetratricopeptide repeats 1	1	QSPSAGVHTFCDR	QSPSAGVHTFC(UniMod:4)DR	3	QSPSAGVHTFC(UniMod:4)DR3	6271.13	10164.7	9293.78
P27139	P27139	CAH2_RAT	Ca2	Carbonic anhydrase 2	1	QSPVDIDTGTAQHDPSLQPLLICYDK	QSPVDIDTGTAQHDPSLQPLLIC(UniMod:4)YDK	3	QSPVDIDTGTAQHDPSLQPLLIC(UniMod:4)YDK3	45407.9	36254.1	35368.4
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	QSPVVNSSDQDIQK	QSPVVNSSDQDIQK	2	QSPVVNSSDQDIQK2	19628.3	20924.4	20220.6
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	QSPYCSNSFDGPGK	QSPYC(UniMod:4)SNSFDGPGK	2	QSPYC(UniMod:4)SNSFDGPGK2	54007.2	60965.1	70427.3
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	QSQAQSKPTTPEK	QSQAQSKPTTPEK	3	QSQAQSKPTTPEK3			9473.38
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	QSQAVIEDASLPLEQK	QSQAVIEDASLPLEQK	2	QSQAVIEDASLPLEQK2	34199.2	25233.1	27696.8
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	QSQAVIEDASLPLEQKK	QSQAVIEDASLPLEQKK	3	QSQAVIEDASLPLEQKK3	8084.49	15475.6	12397.5
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	QSQGISEFYADDIALLK	QSQGISEFYADDIALLK	2	QSQGISEFYADDIALLK2	32010.1	26400.2	29795.1
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	QSQGISEFYADDIALLK	QSQGISEFYADDIALLK	3	QSQGISEFYADDIALLK3	4300.43	4531.45	4735.09
D3ZXJ5	D3ZXJ5	D3ZXJ5_RAT	Efl1	Elongation factor like GTPase 1	1	QSQGQCDLTGEGQEK	QSQGQC(UniMod:4)DLTGEGQEK	2	QSQGQC(UniMod:4)DLTGEGQEK2	2051.89		6041.75
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	QSQIQVFEDGADTTSPETPDSSASK	QSQIQVFEDGADTTSPETPDSSASK	3	QSQIQVFEDGADTTSPETPDSSASK3	44155.6	41081.4	55002.7
Q9JLH7	Q9JLH7	CK5P3_RAT	Cdk5rap3	CDK5 regulatory subunit-associated protein 3	1	QSQLLALK	QSQLLALK	2	QSQLLALK2	24776.3	17022.1	19454.5
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	QSQLVDTLQQR	QSQLVDTLQQR	2	QSQLVDTLQQR2	5256.02	6784.92	15797.8
P07867	P07867	LIPC_RAT	Lipc	Hepatic triacylglycerol lipase	1	QSQPVNVGLVDWISLAYQHYAIAVR	QSQPVNVGLVDWISLAYQHYAIAVR	3	QSQPVNVGLVDWISLAYQHYAIAVR3	8329.91	11461.2	5780.5
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	QSQQIAQDELR	QSQQIAQDELR	2	QSQQIAQDELR2	11242.7	11918.4	9782.32
D3ZT64	D3ZT64	D3ZT64_RAT	Atg2a	Autophagy related 2A	1	QSQSTFSTLVTVLK	QSQSTFSTLVTVLK	2	QSQSTFSTLVTVLK2	2430.91	4209.97	3623.78
Q05695	Q05695	L1CAM_RAT	L1cam	Neural cell adhesion molecule L1	1	QSQVHLSWSPAEDHNSPIEK	QSQVHLSWSPAEDHNSPIEK	4	QSQVHLSWSPAEDHNSPIEK4	12952.8	15521.9	21557.7
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	QSQVTEEEAATAQK	QSQVTEEEAATAQK	2	QSQVTEEEAATAQK2	28313.8	25526.4	18066.1
A0A8I6A8Q1	A0A8I6A8Q1	A0A8I6A8Q1_RAT	A2ml1	Alpha-2-macroglobulin-like 1	1	QSSACPNDAHEEQDVNWK	QSSAC(UniMod:4)PNDAHEEQDVNWK	3	QSSAC(UniMod:4)PNDAHEEQDVNWK3	8180.06		9351.87
P30427	P30427	PLEC_RAT	Plec	Plectin	1	QSSEAEIQAK	QSSEAEIQAK	2	QSSEAEIQAK2	4037.63	4537.72	
F1LQP9	F1LQP9;D3ZER6	F1LQP9_RAT	Tnpo1	Transportin 1	0	QSSFALLGDLTK	QSSFALLGDLTK	2	QSSFALLGDLTK2	54555.5	58003	57111.4
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	QSSGSTTNVASTSSDSR	QSSGSTTNVASTSSDSR	2	QSSGSTTNVASTSSDSR2	5267.93		
A0A8I6A7A4	A0A8I6A7A4	A0A8I6A7A4_RAT	Ddx3y	RNA helicase	1	QSSGYANSGFNNNR	QSSGYANSGFNNNR	2	QSSGYANSGFNNNR2	1821.34		
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	QSSLAEPVSPSK	QSSLAEPVSPSK	2	QSSLAEPVSPSK2	14739.5	12681.7	16317.3
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	QSSLILHGADFSTK	QSSLILHGADFSTK	2	QSSLILHGADFSTK2	22792.8	16435.9	22628.4
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	QSSLILHGADFSTK	QSSLILHGADFSTK	3	QSSLILHGADFSTK3	206208	212744	227835
Q63186	Q63186	EI2BD_RAT	Eif2b4	Translation initiation factor eIF-2B subunit delta	1	QSSLTQYMSIPSSVIHPAMVR	QSSLTQYMSIPSSVIHPAMVR	3	QSSLTQYMSIPSSVIHPAMVR3	13013.2	13075.6	4640.68
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	QSSPAMPHK	QSSPAMPHK	2	QSSPAMPHK2	7598.53	41919.1	22739.4
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	QSSPASYASELKPSESK	QSSPASYASELKPSESK	3	QSSPASYASELKPSESK3	19811.7	28483.1	50268.7
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	QSSQDSLPK	QSSQDSLPK	2	QSSQDSLPK2	9594.02	12947.5	12333.7
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	QSSQSLQEQEAYAVHPSNFVPAVR	QSSQSLQEQEAYAVHPSNFVPAVR	3	QSSQSLQEQEAYAVHPSNFVPAVR3	13915.1	8466.88	7418.64
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	QSSSEISLAVER	QSSSEISLAVER	2	QSSSEISLAVER2	9991.68	4567.25	5892.58
E9PT90	E9PT90	E9PT90_RAT	Spart	Spartin	1	QSSSSGSSIDQGSK	QSSSSGSSIDQGSK	2	QSSSSGSSIDQGSK2			2577.55
A0A8I6GJC5	A0A8I6GJC5	A0A8I6GJC5_RAT	Reps1	RALBP1 associated Eps domain containing 1	1	QSSSYDDPWK	QSSSYDDPWK	2	QSSSYDDPWK2	8924.63	5832.03	1938.1
P63144	P63144	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	1	QSSTAPNVVNAAR	QSSTAPNVVNAAR	2	QSSTAPNVVNAAR2	61809.5	65025.4	69630.3
A0A0G2K4E8	A0A0G2K4E8	A0A0G2K4E8_RAT	R3hdm2	R3H domain containing 2	1	QSSTDSELK	QSSTDSELK	2	QSSTDSELK2	2063.65		2364.71
O35462	O35462	ANGP2_RAT	Angpt2	Angiopoietin-2	1	QSSVIDELEKK	QSSVIDELEKK	3	QSSVIDELEKK3	5267.24	4265.74	6081.83
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	QSSVSCDQSSQIVSMTLNPVK	QSSVSC(UniMod:4)DQSSQIVSMTLNPVK	3	QSSVSC(UniMod:4)DQSSQIVSMTLNPVK3	92262.9	78215.7	103978
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	QSSVSCDQSSQIVSMTLNPVKK	QSSVSC(UniMod:4)DQSSQIVSMTLNPVKK	3	QSSVSC(UniMod:4)DQSSQIVSMTLNPVKK3	24305.4	27806.9	27622.5
D3Z8F6	D3Z8F6	D3Z8F6_RAT	Dennd1b	DENN domain containing 1B	1	QSTATGDGVAR	QSTATGDGVAR	2	QSTATGDGVAR2			9079.88
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	QSTAYSLHQPQGNK	QSTAYSLHQPQGNK	3	QSTAYSLHQPQGNK3	10521.3	17126.5	18069.1
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	QSTDGESVR	QSTDGESVR	2	QSTDGESVR2			25637.7
Q68FP9	Q68FP9	COG6_RAT	Cog6	Conserved oligomeric Golgi complex subunit 6	1	QSTELVCR	QSTELVC(UniMod:4)R	2	QSTELVC(UniMod:4)R2	11465.2	1696.98	8097.48
D3Z8F6	D3Z8F6	D3Z8F6_RAT	Dennd1b	DENN domain containing 1B	1	QSTFVPWEK	QSTFVPWEK	2	QSTFVPWEK2	14220.4	22353.2	15855.9
M0RAK0	M0RAK0	M0RAK0_RAT	Proser2	Proline and serine rich 2	1	QSTPFLEGGK	QSTPFLEGGK	2	QSTPFLEGGK2	63911.5	53492.6	63713.1
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	QSTQTLYVNVAPK	QSTQTLYVNVAPK	2	QSTQTLYVNVAPK2	171790	160788	166747
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	QSTQTLYVNVAPK	QSTQTLYVNVAPK	3	QSTQTLYVNVAPK3	6697.05	4507.76	5184.1
A0A0G2K9K4	A0A0G2K9K4	A0A0G2K9K4_RAT	Tfg	Trafficking from ER to golgi regulator	1	QSTQVMAASMSAFDPLK	QSTQVMAASMSAFDPLK	2	QSTQVMAASMSAFDPLK2	17480.2	11771.8	6956.48
A0A0G2K9K4	A0A0G2K9K4	A0A0G2K9K4_RAT	Tfg	Trafficking from ER to golgi regulator	1	QSTQVMAASMSAFDPLK	QSTQVMAASMSAFDPLK	3	QSTQVMAASMSAFDPLK3	5595.31	4950.71	2544.82
A0A0G2K9K4	A0A0G2K9K4	A0A0G2K9K4_RAT	Tfg	Trafficking from ER to golgi regulator	1	QSTQVMAASMSAFDPLKNQDEINK	QSTQVMAASMSAFDPLKNQDEINK	3	QSTQVMAASMSAFDPLKNQDEINK3	21705.5	20598.8	20018.7
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	QSTSFLVLQEILESDGK	QSTSFLVLQEILESDGK	2	QSTSFLVLQEILESDGK2	72821.7	79524.1	68935.5
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	QSTSFLVLQEILESDGK	QSTSFLVLQEILESDGK	3	QSTSFLVLQEILESDGK3	15419.1	20825.1	24854.9
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	QSTSFLVLQEILESDGKGDPNKPSGFR	QSTSFLVLQEILESDGKGDPNKPSGFR	4	QSTSFLVLQEILESDGKGDPNKPSGFR4	113212	62630	83625.4
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	QSTTHLADGPFAVLVDYIR	QSTTHLADGPFAVLVDYIR	3	QSTTHLADGPFAVLVDYIR3	20246.1	13354.2	26396
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	QSVAAVLMVAQLTR	QSVAAVLMVAQLTR	2	QSVAAVLMVAQLTR2		5427.08	
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	QSVAVNESCGK	QSVAVNESC(UniMod:4)GK	2	QSVAVNESC(UniMod:4)GK2	978648	978855	928288
Q6IFW6	Q6IFV4;Q6IFW6	K1C10_RAT	Krt10	Keratin, type I cytoskeletal 10	0	QSVEADINGLR	QSVEADINGLR	2	QSVEADINGLR2	131012	103914	94125.7
Q6IFW6	Q6IFV4;Q6IFW6	K1C10_RAT	Krt10	Keratin, type I cytoskeletal 10	0	QSVEADINGLR	QSVEADINGLR	3	QSVEADINGLR3	16854.2		12275.1
Q6IFW6	Q6IFV4;Q6IFW6	K1C10_RAT	Krt10	Keratin, type I cytoskeletal 10	0	QSVEADINGLRR	QSVEADINGLRR	2	QSVEADINGLRR2	13842.8	15117.9	8706.22
Q6IFW6	Q6IFV4;Q6IFW6	K1C10_RAT	Krt10	Keratin, type I cytoskeletal 10	0	QSVEADINGLRR	QSVEADINGLRR	3	QSVEADINGLRR3	382834	364616	340167
Q6P7P5	Q6P7P5	5MP2_RAT	Bzw1	eIF5-mimic protein 2	1	QSVEHFTK	QSVEHFTK	2	QSVEHFTK2	9605.32	11299.3	4310.11
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	QSVELCK	QSVELC(UniMod:4)K	1	QSVELC(UniMod:4)K1	9793.55	6535.13	6254.36
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	QSVELCK	QSVELC(UniMod:4)K	2	QSVELC(UniMod:4)K2	403133	428245	456774
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	QSVELCKK	QSVELC(UniMod:4)KK	2	QSVELC(UniMod:4)KK2		8823.72	
O35165	O35165	GOSR2_RAT	Gosr2	Golgi SNAP receptor complex member 2	1	QSVHLVENEIQASIDQIFSHLER	QSVHLVENEIQASIDQIFSHLER	4	QSVHLVENEIQASIDQIFSHLER4	10907	9340.61	15082.6
P97612	P97612	FAAH1_RAT	Faah	Fatty-acid amide hydrolase 1	1	QSVIAQWK	QSVIAQWK	2	QSVIAQWK2	11984	12492.8	5001.74
A0A8I6A0T5	A0A8I6A0T5	A0A8I6A0T5_RAT	Dctn5	Dynactin subunit 5	1	QSVLCGSQNIVLNGK	QSVLC(UniMod:4)GSQNIVLNGK	2	QSVLC(UniMod:4)GSQNIVLNGK2	5080	5286.91	2651.39
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QSVSNLEK	QSVSNLEK	1	QSVSNLEK1	72980.3	46651.3	53151.7
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QSVSNLEK	QSVSNLEK	2	QSVSNLEK2	5.73072e+06	1.18751e+07	1.11951e+07
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QSVSNLEKK	QSVSNLEKK	2	QSVSNLEKK2	1262.8	3900.85	4535.16
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	QSVTDYLMAVK	QSVTDYLMAVK	2	QSVTDYLMAVK2	52795.2	61112.1	49284.6
F1LQ09	F1LQ09	F1LQ09_RAT	Atl2	Atlastin GTPase 2	1	QSVTNSIK	QSVTNSIK	2	QSVTNSIK2	33769	29202.5	32370.3
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	QSVTSSA	QSVTSSA	1	QSVTSSA1	37113.6	35810.8	29642.1
A0A0G2JWD0	A0A0G2JWD0	A0A0G2JWD0_RAT	Prom1	Prominin 1	1	QSVWALK	QSVWALK	2	QSVWALK2	8043.48	12035.5	13570.4
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	QSVYEEK	QSVYEEK	2	QSVYEEK2		24273.5	
P58751	P58751	RELN_RAT	Reln	Reelin	1	QSWAIDHVYIGEACPR	QSWAIDHVYIGEAC(UniMod:4)PR	2	QSWAIDHVYIGEAC(UniMod:4)PR2	4044.08	2618.13	4106.12
P58751	P58751	RELN_RAT	Reln	Reelin	1	QSWAIDHVYIGEACPR	QSWAIDHVYIGEAC(UniMod:4)PR	3	QSWAIDHVYIGEAC(UniMod:4)PR3	56667.6	69175.8	61607.3
P86182	P86182	CCD22_RAT	Ccdc22	Coiled-coil domain-containing protein 22	1	QSWGPLGAPTQVR	QSWGPLGAPTQVR	2	QSWGPLGAPTQVR2	6152.19	4628.9	8084.91
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	QSYHGYTQMMECLQGYK	QSYHGYTQMMEC(UniMod:4)LQGYK	3	QSYHGYTQMMEC(UniMod:4)LQGYK3	84278	103826	80731.5
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	QSYYSIAK	QSYYSIAK	1	QSYYSIAK1	1905.15	1640.02	1616.06
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	QSYYSIAK	QSYYSIAK	2	QSYYSIAK2	97726.1	118679	111545
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	QTAALLHGTIILDCVNMDAK	QTAALLHGTIILDC(UniMod:4)VNMDAK	3	QTAALLHGTIILDC(UniMod:4)VNMDAK3	41576.6	32646.5	32690.5
P31053	P31053	CD37_RAT	Cd37	Leukocyte antigen CD37	1	QTADICALPAK	QTADIC(UniMod:4)ALPAK	2	QTADIC(UniMod:4)ALPAK2	2164.69	4260.84	
F1LNX8	F1LNX8	F1LNX8_RAT	Cmahp	Cytidine monophosphate-N-acetylneuraminic acid hydroxylase	1	QTAETLLSLSPADVANLK	QTAETLLSLSPADVANLK	2	QTAETLLSLSPADVANLK2	2542.45	3796.36	
Q496Z1	A0A8I5ZKI9;Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	0	QTAEVALANLK	QTAEVALANLK	2	QTAEVALANLK2	8277.72	12983.9	6746.93
P02770	P02770	ALBU_RAT	Alb	Albumin	1	QTALAELVK	QTALAELVK	1	QTALAELVK1	91575.5	92899.5	72003
P02770	P02770	ALBU_RAT	Alb	Albumin	1	QTALAELVK	QTALAELVK	2	QTALAELVK2	1.34431e+07	1.34609e+07	1.30887e+07
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	QTALQDELLR	QTALQDELLR	2	QTALQDELLR2	17283.1	18056.6	15499.3
B2GV14	B2GV14	B2GV14_RAT	Txlna	Taxilin alpha	1	QTAPGAEAEGSTSQAPGK	QTAPGAEAEGSTSQAPGK	2	QTAPGAEAEGSTSQAPGK2	4967.83	7688.04	1647.91
P14056	A0A8I6ATH0;P14056;P11345	ARAF_RAT	Araf	Serine/threonine-protein kinase A-Raf	0	QTAQGMDYLHAK	QTAQGMDYLHAK	2	QTAQGMDYLHAK2	6084.99	5945.31	6044.43
P14056	A0A8I6ATH0;P14056;P11345	ARAF_RAT	Araf	Serine/threonine-protein kinase A-Raf	0	QTAQGMDYLHAK	QTAQGMDYLHAK	3	QTAQGMDYLHAK3	30798.4	38264.5	37081.4
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	QTAQQIVSHVQNK	QTAQQIVSHVQNK	2	QTAQQIVSHVQNK2	3865.89	2518.11	1022.95
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	QTAQQIVSHVQNK	QTAQQIVSHVQNK	3	QTAQQIVSHVQNK3	26689.6	40823.6	32166.7
P31722	P31722	C1QC_RAT	C1qc	Complement C1q subcomponent subunit C	1	QTAQYPAANGLVK	QTAQYPAANGLVK	2	QTAQYPAANGLVK2	16189.7	10637	17947.1
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	QTATILSMDKDCLR	QTATILSMDKDC(UniMod:4)LR	3	QTATILSMDKDC(UniMod:4)LR3	49863.9	66925.1	65956
P62425	F1M1M2;P62425;F1M4C7;A0A8I6AUG1;M0R3M3;D3ZU22;D4A8X2;A0A8I6AMN7;D3ZPL5;A0A8I6B5R5;F1M2Q3;D4A6B9	RL7A_RAT	Rpl7a	Large ribosomal subunit protein eL8	0	QTATQLLK	QTATQLLK	2	QTATQLLK2	19770.8	22696.8	8706.05
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	QTAVVEK	QTAVVEK	2	QTAVVEK2	27946.2		25918.8
P18614	P18614	ITA1_RAT	Itga1	Integrin alpha-1	1	QTCCSSLK	QTC(UniMod:4)C(UniMod:4)SSLK	2	QTC(UniMod:4)C(UniMod:4)SSLK2	2676.13		3247.1
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	QTCDLGTLESLLLTAPDRPK	QTC(UniMod:4)DLGTLESLLLTAPDRPK	3	QTC(UniMod:4)DLGTLESLLLTAPDRPK3	22044	31492.6	27211.3
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	QTCDLGTLESLLLTAPDRPKPLLFK	QTC(UniMod:4)DLGTLESLLLTAPDRPKPLLFK	3	QTC(UniMod:4)DLGTLESLLLTAPDRPKPLLFK3	38022.1	30218.6	35122.6
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	QTCDLGTLESLLLTAPDRPKPLLFK	QTC(UniMod:4)DLGTLESLLLTAPDRPKPLLFK	4	QTC(UniMod:4)DLGTLESLLLTAPDRPKPLLFK4	85552.1	165443	156969
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	QTCGQPQPCER	QTC(UniMod:4)GQPQPC(UniMod:4)ER	2	QTC(UniMod:4)GQPQPC(UniMod:4)ER2			4149.73
Q8CIN9	Q8CIN9	RFFL_RAT	Rffl	E3 ubiquitin-protein ligase rififylin	1	QTCLDCK	QTC(UniMod:4)LDC(UniMod:4)K	2	QTC(UniMod:4)LDC(UniMod:4)K2	4657.87		5402.15
Q9QYF3	Q9QYF3	MYO5A_RAT	Myo5a	Unconventional myosin-Va	1	QTCQNVLEK	QTC(UniMod:4)QNVLEK	2	QTC(UniMod:4)QNVLEK2	3939.36		3017.88
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	QTDDLRGEIAVLEATVQNNQDER	QTDDLRGEIAVLEATVQNNQDER	3	QTDDLRGEIAVLEATVQNNQDER3	29283.4	9073.38	13065.2
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	QTDFGMYDYFTR	QTDFGMYDYFTR	2	QTDFGMYDYFTR2	8387.97	7138.16	
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	QTDIPNK	QTDIPNK	2	QTDIPNK2		203449	
Q8R4E1	Q8R4E1	TIP_RAT	Itfg1	T-cell immunomodulatory protein	1	QTDLFVLR	QTDLFVLR	2	QTDLFVLR2	7437.67	5630.91	4450.25
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	QTDSVLELK	QTDSVLELK	2	QTDSVLELK2	17373.3	15143.9	14593.3
Q5PQP2	Q5PQP2	RCAS1_RAT	Ebag9	Receptor-binding cancer antigen expressed on SiSo cells	1	QTDVEEWTSWDEDAPTSVK	QTDVEEWTSWDEDAPTSVK	3	QTDVEEWTSWDEDAPTSVK3	3066.74	4653.01	
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	QTDVFAR	QTDVFAR	2	QTDVFAR2	13897.1	19014.3	19429.9
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QTDVLQQLSIQMANAK	QTDVLQQLSIQMANAK	2	QTDVLQQLSIQMANAK2	23219.2	22664.5	24769.1
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QTDVLQQLSIQMANAK	QTDVLQQLSIQMANAK	3	QTDVLQQLSIQMANAK3	19758.1	28686.6	26978.4
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	QTEALQDEEDDHSQVEELER	QTEALQDEEDDHSQVEELER	3	QTEALQDEEDDHSQVEELER3	12949.5	26290.6	18560.8
A0A8I6G5Q1	A0A8I6G5Q1	A0A8I6G5Q1_RAT	Sema4d	Semaphorin 4D	1	QTECLNYIR	QTEC(UniMod:4)LNYIR	2	QTEC(UniMod:4)LNYIR2	19305	21142.8	20014.2
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	QTEDSLASEQDHLASK	QTEDSLASEQDHLASK	3	QTEDSLASEQDHLASK3	10768.7	14542.6	8597.3
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	QTEDVAEVLNHCASSNWSER	QTEDVAEVLNHC(UniMod:4)ASSNWSER	3	QTEDVAEVLNHC(UniMod:4)ASSNWSER3	15139.2	17257.9	6468.86
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	QTEDVAEVLNR	QTEDVAEVLNR	2	QTEDVAEVLNR2	29603.5	25973.3	23605.2
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	QTEEVECQAHGWSFTPQCNK	QTEEVEC(UniMod:4)QAHGWSFTPQC(UniMod:4)NK	3	QTEEVEC(UniMod:4)QAHGWSFTPQC(UniMod:4)NK3	28032.9	26017	28482.4
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	QTEITSATQNQLLFHMLK	QTEITSATQNQLLFHMLK	3	QTEITSATQNQLLFHMLK3	3885.76	12722.8	8995.11
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	QTELGSLPVADVLYR	QTELGSLPVADVLYR	2	QTELGSLPVADVLYR2	8266.35	6333.7	4438.11
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	QTENAFSPSR	QTENAFSPSR	2	QTENAFSPSR2	617028	676258	668516
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	QTEPNPEDSLPK	QTEPNPEDSLPK	2	QTEPNPEDSLPK2	26682	15123	18562.9
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	QTEQADLINELYQGK	QTEQADLINELYQGK	2	QTEQADLINELYQGK2	13554.4	12769.3	11363.9
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	QTEQADLINELYQGK	QTEQADLINELYQGK	3	QTEQADLINELYQGK3	18508.8	19678.8	27268.2
P49744	A0A8I6G4F0;P49744	TSP4_RAT	Thbs4	Thrombospondin-4	0	QTEQTYWQATPFR	QTEQTYWQATPFR	2	QTEQTYWQATPFR2	330202	380405	357344
P49744	A0A8I6G4F0;P49744	TSP4_RAT	Thbs4	Thrombospondin-4	0	QTEQTYWQATPFR	QTEQTYWQATPFR	3	QTEQTYWQATPFR3	101279	108329	119233
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	QTESTSFLEK	QTESTSFLEK	2	QTESTSFLEK2	1.22265e+06	1.20447e+06	1.36447e+06
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	QTESTSFLEKK	QTESTSFLEKK	2	QTESTSFLEKK2	933.307	1614.39	2920.95
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	QTESTSFLEKK	QTESTSFLEKK	3	QTESTSFLEKK3	18427.1	22871.5	41681.6
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	QTETGEGSVCQR	QTETGEGSVC(UniMod:4)QR	2	QTETGEGSVC(UniMod:4)QR2	6390.25		7142.92
Q6AYE2	Q6AYE2	SHLB1_RAT	Sh3glb1	Endophilin-B1	1	QTEVLLQPNPNAR	QTEVLLQPNPNAR	2	QTEVLLQPNPNAR2	35172.5	35593.2	36093.5
Q5PPJ9	Q5PPJ9	SHLB2_RAT	Sh3glb2	Endophilin-B2	1	QTEVLLQPNPSAR	QTEVLLQPNPSAR	2	QTEVLLQPNPSAR2	32626.1	32890	35573.5
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	QTFESETLECSEPATQTGPR	QTFESETLEC(UniMod:4)SEPATQTGPR	3	QTFESETLEC(UniMod:4)SEPATQTGPR3	77801.1	92329.1	98547.6
B0BN63	B0BN63	B0BN63_RAT	Ahsa1	Activator of Hsp90 ATPase activity 1	1	QTFGYGAR	QTFGYGAR	2	QTFGYGAR2	18286.2	18497	12085.3
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	QTFIIQELEK	QTFIIQELEK	2	QTFIIQELEK2	103011	97105.1	123197
Q920E0	Q920E0	PAR4_RAT	F2rl3	Proteinase-activated receptor 4	1	QTFLLAGSDR	QTFLLAGSDR	2	QTFLLAGSDR2	125555	113645	108736
P01026	P01026	CO3_RAT	C3	Complement C3	1	QTFSAEFEVK	QTFSAEFEVK	2	QTFSAEFEVK2	168440	192398	140067
Q4KLZ1	Q4KLZ1;F1M8C8	TM186_RAT	Tmem186	Transmembrane protein 186	0	QTFYLTLR	QTFYLTLR	2	QTFYLTLR2	4232.27		4290.98
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	QTGAPDAGQE	QTGAPDAGQE	1	QTGAPDAGQE1	52426.1	52100.4	
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	QTGAPDAGQE	QTGAPDAGQE	2	QTGAPDAGQE2	39715.1	38142.5	
A0A8J8YHW4	A0A8J8YHW4	A0A8J8YHW4_RAT	Clk2	Secretory carrier-associated membrane protein	1	QTGASFQK	QTGASFQK	2	QTGASFQK2	48911.6	48994.7	
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	QTGDFTSECHCLPGFEGSNCER	QTGDFTSEC(UniMod:4)HC(UniMod:4)LPGFEGSNC(UniMod:4)ER	3	QTGDFTSEC(UniMod:4)HC(UniMod:4)LPGFEGSNC(UniMod:4)ER3	52671.6	59914.7	53891.6
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	QTGDVTCNCTDGR	QTGDVTC(UniMod:4)NC(UniMod:4)TDGR	2	QTGDVTC(UniMod:4)NC(UniMod:4)TDGR2		689.889	2225.58
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	QTGEGVGPQEYTLVK	QTGEGVGPQEYTLVK	2	QTGEGVGPQEYTLVK2	26532.6	27845.9	34132.6
Q62825	Q62825	EXOC3_RAT	Exoc3	Exocyst complex component 3	1	QTGFVPPGRPK	QTGFVPPGRPK	3	QTGFVPPGRPK3	19912.1	22361.2	24092.1
D3ZSN4	D3ZSN4	D3ZSN4_RAT	Zfp330	Zinc finger protein 330	1	QTGGEEGDGASGYDAYWK	QTGGEEGDGASGYDAYWK	2	QTGGEEGDGASGYDAYWK2	5216.8	1892.45	8319.95
E9PT90	E9PT90	E9PT90_RAT	Spart	Spartin	1	QTGHTLLEDYQIIESPQR	QTGHTLLEDYQIIESPQR	3	QTGHTLLEDYQIIESPQR3	6874.58	20078.4	9380.25
A0A8I6A8Y6	A0A8I6A8Y6	A0A8I6A8Y6_RAT	Sf3b2	Splicing factor 3b, subunit 2	1	QTGIVLNRPVLR	QTGIVLNRPVLR	3	QTGIVLNRPVLR3	12663.6	19020.9	19244.4
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	QTGLAPGQEYEISLHIVK	QTGLAPGQEYEISLHIVK	3	QTGLAPGQEYEISLHIVK3	615896	629681	558009
P58751	P58751	RELN_RAT	Reln	Reelin	1	QTGPILGNMWAIDNVYIGPSCLK	QTGPILGNMWAIDNVYIGPSC(UniMod:4)LK	3	QTGPILGNMWAIDNVYIGPSC(UniMod:4)LK3	22404.3	23476.7	15332.5
Q9WVH8	Q9WVH8	FBLN5_RAT	Fbln5	Fibulin-5	1	QTGPISATLVMTR	QTGPISATLVMTR	2	QTGPISATLVMTR2	154986	108933	119100
Q9WVH8	Q9WVH8	FBLN5_RAT	Fbln5	Fibulin-5	1	QTGPISATLVMTRPIK	QTGPISATLVMTRPIK	2	QTGPISATLVMTRPIK2	26063.4	26667.6	23548.9
Q9WVH8	Q9WVH8	FBLN5_RAT	Fbln5	Fibulin-5	1	QTGPISATLVMTRPIK	QTGPISATLVMTRPIK	3	QTGPISATLVMTRPIK3	476628	424542	428082
Q9WVH8	Q9WVH8	FBLN5_RAT	Fbln5	Fibulin-5	1	QTGPISATLVMTRPIKGPR	QTGPISATLVMTRPIKGPR	3	QTGPISATLVMTRPIKGPR3	25646.6	9676.08	15216.7
Q9WVH8	Q9WVH8	FBLN5_RAT	Fbln5	Fibulin-5	1	QTGPISATLVMTRPIKGPR	QTGPISATLVMTRPIKGPR	4	QTGPISATLVMTRPIKGPR4	170575	203792	239125
Q9WVH8	Q9WVH8	FBLN5_RAT	Fbln5	Fibulin-5	1	QTGQCLDIDECR	QTGQC(UniMod:4)LDIDEC(UniMod:4)R	2	QTGQC(UniMod:4)LDIDEC(UniMod:4)R2	642287	624228	643875
Q9WVH8	Q9WVH8	FBLN5_RAT	Fbln5	Fibulin-5	1	QTGQCLDIDECR	QTGQC(UniMod:4)LDIDEC(UniMod:4)R	3	QTGQC(UniMod:4)LDIDEC(UniMod:4)R3	24488.2	27987.3	16971.1
D3ZKU7	D3ZKU7	BL1S1_RAT	Bloc1s1	Biogenesis of lysosome-related organelles complex 1 subunit 1	1	QTGQWIGMVENFNQALK	QTGQWIGMVENFNQALK	3	QTGQWIGMVENFNQALK3	4643.43	2721.97	7605.43
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	QTGSIAGGTK	QTGSIAGGTK	1	QTGSIAGGTK1	1990.9		444.989
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	QTGSIAGGTK	QTGSIAGGTK	2	QTGSIAGGTK2			12951.5
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	QTGVIQTAAILDR	QTGVIQTAAILDR	2	QTGVIQTAAILDR2	5347.01	4933.64	3467.21
A0A8I5ZPY8	A0A8I6APG8;A0A8I5ZPY8;F1M7T1	A0A8I5ZPY8_RAT	Ndufb4	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4	0	QTHIEDPALIR	QTHIEDPALIR	2	QTHIEDPALIR2	5171.18	3119.55	
A0A8I5ZPY8	A0A8I6APG8;A0A8I5ZPY8;F1M7T1	A0A8I5ZPY8_RAT	Ndufb4	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4	0	QTHIEDPALIR	QTHIEDPALIR	3	QTHIEDPALIR3	73216.3	57153.4	76899.5
B4F7E7	B4F7E7	PALS1_RAT	Pals1	Protein PALS1	1	QTIEEDKEPEK	QTIEEDKEPEK	2	QTIEEDKEPEK2	2028.46		2378.41
B4F7E7	B4F7E7	PALS1_RAT	Pals1	Protein PALS1	1	QTIEEDKEPEK	QTIEEDKEPEK	3	QTIEEDKEPEK3	1725.13	11075.3	6129.5
D4A599	A0A8I6A869;D4A599	D4A599_RAT	Dnah17	Dynein, axonemal, heavy chain 17	0	QTIELLK	QTIELLK	2	QTIELLK2	42757.6	31959.3	40237.2
P68255	A0A8I6AJ05;P68255	1433T_RAT	Ywhaq	14-3-3 protein theta	0	QTIENSQGAYQEAFDISK	QTIENSQGAYQEAFDISK	3	QTIENSQGAYQEAFDISK3	356561	404146	414126
P68255	A0A8I6AJ05;P68255	1433T_RAT	Ywhaq	14-3-3 protein theta	0	QTIENSQGAYQEAFDISKK	QTIENSQGAYQEAFDISKK	3	QTIENSQGAYQEAFDISKK3	135266	146030	193322
O70467	O70467	ANM3_RAT	Prmt3	Protein arginine N-methyltransferase 3	1	QTIFLLEKPFPVK	QTIFLLEKPFPVK	3	QTIFLLEKPFPVK3	11583.8	16084.9	12369.2
P51158	P51158	RAB28_RAT	Rab28	Ras-related protein Rab-28	1	QTIGLDFFLR	QTIGLDFFLR	2	QTIGLDFFLR2	7171.51	5209.7	
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	QTIITLR	QTIITLR	2	QTIITLR2	55434.4	97002.3	93244.4
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	QTILESIR	QTILESIR	2	QTILESIR2	22562	21560.7	
O35977	O35977	O35977_RAT	Gfra2	GDNF family receptor alpha-2	1	QTILPSCSYEDK	QTILPSC(UniMod:4)SYEDK	2	QTILPSC(UniMod:4)SYEDK2	13900.5	15406.9	16029.7
O35977	O35977	O35977_RAT	Gfra2	GDNF family receptor alpha-2	1	QTILPSCSYEDKEKPNCLDLR	QTILPSC(UniMod:4)SYEDKEKPNC(UniMod:4)LDLR	3	QTILPSC(UniMod:4)SYEDKEKPNC(UniMod:4)LDLR3	4291.92	5522.41	
O35977	O35977	O35977_RAT	Gfra2	GDNF family receptor alpha-2	1	QTILPSCSYEDKEKPNCLDLR	QTILPSC(UniMod:4)SYEDKEKPNC(UniMod:4)LDLR	4	QTILPSC(UniMod:4)SYEDKEKPNC(UniMod:4)LDLR4	3807.13	6917.7	3121.07
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	QTINSLESLLATNR	QTINSLESLLATNR	3	QTINSLESLLATNR3	2347.34	9127.06	4520.92
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	QTISLFK	QTISLFK	2	QTISLFK2	49117.1	44333.2	32998.4
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	QTITAQNAAVQAVK	QTITAQNAAVQAVK	2	QTITAQNAAVQAVK2	51715.5	48646.8	56230.2
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	QTITAQNAAVQAVK	QTITAQNAAVQAVK	3	QTITAQNAAVQAVK3	5261.02	5086.41	13087.3
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	QTKPEFDQVLQGTAASTK	QTKPEFDQVLQGTAASTK	3	QTKPEFDQVLQGTAASTK3	5443.21	4396.96	9134.36
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	QTLDQLSEIGQDVGQLLSNPK	QTLDQLSEIGQDVGQLLSNPK	3	QTLDQLSEIGQDVGQLLSNPK3	17355.2	20868.7	22904.2
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	QTLEALNYLHDNK	QTLEALNYLHDNK	2	QTLEALNYLHDNK2	3731.39	4970.23	6640.55
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	QTLEALNYLHDNK	QTLEALNYLHDNK	3	QTLEALNYLHDNK3	28909.7	38739.7	28892
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	QTLEDTLNLYR	QTLEDTLNLYR	2	QTLEDTLNLYR2	22590.9	18859.7	36830.1
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QTLENER	QTLENER	2	QTLENER2	1.72838e+06	1.55006e+06	1.78935e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QTLENERGELANEVK	QTLENERGELANEVK	2	QTLENERGELANEVK2	262316	225977	186280
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	QTLENERGELANEVK	QTLENERGELANEVK	3	QTLENERGELANEVK3	6.31275e+06	8.13996e+06	8.57294e+06
A0A8I6A3B1	A0A8I6A3B1	A0A8I6A3B1_RAT	Ncoa4	Nuclear receptor coactivator 4	1	QTLENSQTSAR	QTLENSQTSAR	2	QTLENSQTSAR2	7386.56		
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	QTLFASQVMR	QTLFASQVMR	2	QTLFASQVMR2	52648.4	74247.2	53894
B4F767	B4F767	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	1	QTLFEDSFQQIMNMKPYDLR	QTLFEDSFQQIMNMKPYDLR	3	QTLFEDSFQQIMNMKPYDLR3	8001.49	8721.9	6921.81
A0A0G2JVY4	A0A0G2JVY4	A0A0G2JVY4_RAT	Tmem63a	Transmembrane protein 63a	1	QTLFITGLPR	QTLFITGLPR	2	QTLFITGLPR2	6697.5	9265.06	
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	QTLGEGER	QTLGEGER	2	QTLGEGER2		93731.6	
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	QTLGVAQK	QTLGVAQK	2	QTLGVAQK2	353860	314997	367808
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	QTLGYHVYPTCR	QTLGYHVYPTC(UniMod:4)R	3	QTLGYHVYPTC(UniMod:4)R3	39127.9	44598.8	43882.4
P15943	P15943	APLP2_RAT	Aplp2	Amyloid beta precursor like protein 2	1	QTLIQHFQAMVK	QTLIQHFQAMVK	3	QTLIQHFQAMVK3	12384.8	15167.7	26320
A0A8I6A8Q1	A0A8I6A8Q1	A0A8I6A8Q1_RAT	A2ml1	Alpha-2-macroglobulin-like 1	1	QTLIWLVK	QTLIWLVK	2	QTLIWLVK2	13387.2	10636.4	14658.8
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	QTLLDMIAR	QTLLDMIAR	2	QTLLDMIAR2	16769.5	20541.7	20196.3
Q9WU61	Q9WU61	CLCC1_RAT	Clcc1	Chloride channel CLIC-like protein 1	1	QTLLEIQK	QTLLEIQK	2	QTLLEIQK2	3699.08	2355.36	
Q3ZU82	Q3ZU82	GOGA5_RAT	Golga5	Golgin subfamily A member 5	1	QTLLESLSTEK	QTLLESLSTEK	2	QTLLESLSTEK2	8184	6092.63	4067.21
D4AB06	D4AB06	D4AB06_RAT	Haus5	HAUS augmin-like complex, subunit 5	1	QTLLLQALAGAVR	QTLLLQALAGAVR	2	QTLLLQALAGAVR2	612.74	1432.85	1662.43
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	QTLLNHERPIK	QTLLNHERPIK	2	QTLLNHERPIK2	279970	210224	258313
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	QTLLNHERPIK	QTLLNHERPIK	3	QTLLNHERPIK3	6.7939e+06	6.98395e+06	6.75993e+06
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	QTLMEVK	QTLMEVK	2	QTLMEVK2	157484	169351	150892
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	QTLNAIK	QTLNAIK	2	QTLNAIK2	25292.1	17086.7	20531.3
P47861	P47861	SYT5_RAT	Syt5	Synaptotagmin-5	1	QTLNPHFGETFAFK	QTLNPHFGETFAFK	3	QTLNPHFGETFAFK3	17003	26152.5	20712.4
Q5FWU0	Q5FWU0	Q5FWU0_RAT	Wasf2	Wiskott-Aldrich syndrome protein family member	1	QTLPSDTSELECR	QTLPSDTSELEC(UniMod:4)R	2	QTLPSDTSELEC(UniMod:4)R2	165195	166820	176007
Q5FWU0	Q5FWU0	Q5FWU0_RAT	Wasf2	Wiskott-Aldrich syndrome protein family member	1	QTLPSDTSELECR	QTLPSDTSELEC(UniMod:4)R	3	QTLPSDTSELEC(UniMod:4)R3	4180.11		9134.04
P18266	P18266	GSK3B_RAT	Gsk3b	Glycogen synthase kinase-3 beta	1	QTLPVIYVK	QTLPVIYVK	2	QTLPVIYVK2	3641.84	8499.27	8603.95
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	QTLQNTPVGSSSK	QTLQNTPVGSSSK	2	QTLQNTPVGSSSK2	6565.38	5762.63	5158.7
P20651	P20651	PP2BB_RAT	Ppp3cb	Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform	1	QTLQSATVEAIEAEK	QTLQSATVEAIEAEK	2	QTLQSATVEAIEAEK2	7474.46	4380.87	6742.85
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	QTLQSEQPLQVAR	QTLQSEQPLQVAR	2	QTLQSEQPLQVAR2	144572	135563	148658
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	QTLQSEQPLQVAR	QTLQSEQPLQVAR	3	QTLQSEQPLQVAR3	19320.9	18871	27083.7
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	QTLSVDSLPLVEK	QTLSVDSLPLVEK	2	QTLSVDSLPLVEK2	5386.83	4867.21	7445.9
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	QTLTCTTYGVPQPLSVQWHWR	QTLTC(UniMod:4)TTYGVPQPLSVQWHWR	3	QTLTC(UniMod:4)TTYGVPQPLSVQWHWR3	84355.9	78947.4	69283.6
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	QTLTCTTYGVPQPLSVQWHWRPWTPCK	QTLTC(UniMod:4)TTYGVPQPLSVQWHWRPWTPC(UniMod:4)K	4	QTLTC(UniMod:4)TTYGVPQPLSVQWHWRPWTPC(UniMod:4)K4	110291	102292	129063
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	QTLVSDFPPPAGR	QTLVSDFPPPAGR	2	QTLVSDFPPPAGR2	3550.8		3920.3
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	QTLWELLNHFAQTR	QTLWELLNHFAQTR	3	QTLWELLNHFAQTR3	10734.9	9385.39	7160.84
A8WCF8	A8WCF8	TPRGL_RAT	Tprg1l	Tumor protein p63-regulated gene 1-like protein	1	QTLWPLNVHDPTR	QTLWPLNVHDPTR	3	QTLWPLNVHDPTR3	73848.5	52171.3	63444.7
A8WCF8	A8WCF8	TPRGL_RAT	Tprg1l	Tumor protein p63-regulated gene 1-like protein	1	QTLWPLNVHDPTRR	QTLWPLNVHDPTRR	3	QTLWPLNVHDPTRR3	16460.7	23169	13336.6
A8WCF8	A8WCF8	TPRGL_RAT	Tprg1l	Tumor protein p63-regulated gene 1-like protein	1	QTLWPLNVHDPTRR	QTLWPLNVHDPTRR	4	QTLWPLNVHDPTRR4	27244.2	33221.3	24226.6
D3ZFJ3	D3ZFJ3	3BP1_RAT	Sh3bp1	SH3 domain-binding protein 1	1	QTMASDPHSLEEFCSDPHAVAGALK	QTMASDPHSLEEFC(UniMod:4)SDPHAVAGALK	4	QTMASDPHSLEEFC(UniMod:4)SDPHAVAGALK4	7893.62	16985.7	14702.7
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	QTMEELK	QTMEELK	2	QTMEELK2	11354.4	6559.19	10164.8
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	QTMEELKELLK	QTMEELKELLK	3	QTMEELKELLK3	3627.37		4256.09
Q29TV8	Q29TV8	GKN2_RAT	Gkn2	Gastrokine-2	1	QTMNAMASTEYTWVK	QTMNAMASTEYTWVK	2	QTMNAMASTEYTWVK2	3206.52		
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	QTMQVDEHAR	QTMQVDEHAR	2	QTMQVDEHAR2	815.487		
A0A1W2Q642	A0A1W2Q642	A0A1W2Q642_RAT	Pi16	Peptidase inhibitor 16	1	QTMVELHNHYR	QTMVELHNHYR	2	QTMVELHNHYR2	115971	84740.8	91043.1
A0A1W2Q642	A0A1W2Q642	A0A1W2Q642_RAT	Pi16	Peptidase inhibitor 16	1	QTMVELHNHYR	QTMVELHNHYR	3	QTMVELHNHYR3	2.09219e+06	1.99646e+06	1.80207e+06
Q5XXR3	Q5XXR3	ARHG6_RAT	Arhgef6	Rho guanine nucleotide exchange factor 6	1	QTNEDELSVCK	QTNEDELSVC(UniMod:4)K	2	QTNEDELSVC(UniMod:4)K2	3091.23	4481.1	2766.51
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	QTNFLSPDSDR	QTNFLSPDSDR	2	QTNFLSPDSDR2	63858.1	34703.8	53752.1
P83888	P83888;A0A8I6A5N2	TBG1_RAT	Tubg1	Tubulin gamma-1 chain	0	QTNHCYIAILNIIQGEVDPTQVHK	QTNHC(UniMod:4)YIAILNIIQGEVDPTQVHK	4	QTNHC(UniMod:4)YIAILNIIQGEVDPTQVHK4	10123	7471.25	11955.5
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	QTNPSAMEVEEDDPVPEIR	QTNPSAMEVEEDDPVPEIR	3	QTNPSAMEVEEDDPVPEIR3	657290	596170	739023
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	QTNPSAMEVEEDDPVPEIRR	QTNPSAMEVEEDDPVPEIRR	3	QTNPSAMEVEEDDPVPEIRR3	50934.3	70425.3	64302
A0A0G2KA54	P08932;A0A0G2KA54	A0A0G2KA54_RAT	Kng1	Kininogen 1	0	QTNTELTADCETK	QTNTELTADC(UniMod:4)ETK	2	QTNTELTADC(UniMod:4)ETK2	115653	89804.7	101477
A0A0G2KA54	P08932;A0A0G2KA54	A0A0G2KA54_RAT	Kng1	Kininogen 1	0	QTNTELTADCETK	QTNTELTADC(UniMod:4)ETK	3	QTNTELTADC(UniMod:4)ETK3	2179.7		3064.84
A0A0G2JZC4	A0A0G2JZC4	A0A0G2JZC4_RAT	Sema6d	Semaphorin 6D	1	QTNVALFADGK	QTNVALFADGK	2	QTNVALFADGK2	4746.22		4400.91
Q6V0K7	Q6V0K7	OIT3_RAT	Oit3	Oncoprotein-induced transcript 3 protein	1	QTPGSSGDIIIR	QTPGSSGDIIIR	2	QTPGSSGDIIIR2	39710.8	42905.2	44009.2
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	QTPMYAHSIAALLK	QTPMYAHSIAALLK	3	QTPMYAHSIAALLK3	4803.91	2650.09	
B1WBN7	B1WBN7	B1WBN7_RAT	Fam20c	FAM20C	1	QTPPYDSGHR	QTPPYDSGHR	2	QTPPYDSGHR2	94522.5		75798.8
B1WBN7	B1WBN7	B1WBN7_RAT	Fam20c	FAM20C	1	QTPPYDSGHR	QTPPYDSGHR	3	QTPPYDSGHR3	53557.9		48701
Q9Z1A5	Q9Z1A5	ULA1_RAT	Nae1	NEDD8-activating enzyme E1 regulatory subunit	1	QTPSFWILAR	QTPSFWILAR	2	QTPSFWILAR2	17585.6	15365	18176.1
P62501	P62501	T22D1_RAT	Tsc22d1	TSC22 domain family protein 1	1	QTPTEASSSER	QTPTEASSSER	2	QTPTEASSSER2			6159.11
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	QTQAILQAVADK	QTQAILQAVADK	2	QTQAILQAVADK2	45430.5	63201.2	41344.4
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	QTQDSMTEESHK	QTQDSMTEESHK	2	QTQDSMTEESHK2			98074.7
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	QTQDSMTEESHK	QTQDSMTEESHK	3	QTQDSMTEESHK3			26012.7
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	QTQMETEK	QTQMETEK	2	QTQMETEK2			3459.36
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	QTQPPVAWVVPVADK	QTQPPVAWVVPVADK	2	QTQPPVAWVVPVADK2	9960.19	5675.91	10099.4
G3V870	G3V870	G3V870_RAT	Spire2	Spire-type actin nucleation factor 2	1	QTQSLYVPNTRTLNFQ	QTQSLYVPNTRTLNFQ	3	QTQSLYVPNTRTLNFQ3	47035.9	33066.6	40855.9
P63018	P0DMW0;P0DMW1;A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	QTQTFTTYSDNQPGVLIQVYEGER	QTQTFTTYSDNQPGVLIQVYEGER	3	QTQTFTTYSDNQPGVLIQVYEGER3	225917	209914	205883
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	QTQTFTTYSDNQSSVLVQVYEGER	QTQTFTTYSDNQSSVLVQVYEGER	3	QTQTFTTYSDNQSSVLVQVYEGER3	10684.5	7234.22	15506.4
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	QTQTLRDELQK	QTQTLRDELQK	3	QTQTLRDELQK3	11891.8	13006.6	19848.6
G3V7E6	G3V7E6	G3V7E6_RAT	Pcm1	Pericentriolar material 1	1	QTQTSEVYDAK	QTQTSEVYDAK	2	QTQTSEVYDAK2	2711.54	4000.59	3398.43
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	QTQVSVLPEGGETPLFK	QTQVSVLPEGGETPLFK	2	QTQVSVLPEGGETPLFK2	2.71005e+06	2.63785e+06	2.82765e+06
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	QTQVSVLPEGGETPLFK	QTQVSVLPEGGETPLFK	3	QTQVSVLPEGGETPLFK3	586108	617398	672760
D3ZKE1	D3ZKE1	D3ZKE1_RAT	Uvrag	UV radiation resistance associated	1	QTQVTVQR	QTQVTVQR	2	QTQVTVQR2	12584.9	9452.67	11945.5
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	QTRPVQPVAPRPEALTK	QTRPVQPVAPRPEALTK	4	QTRPVQPVAPRPEALTK4	28992.9	38731.6	39178
D3ZLA3	D3ZLA3	D3ZLA3_RAT	Cpne3	Copine 3	1	QTSDGHWLMVHR	QTSDGHWLMVHR	3	QTSDGHWLMVHR3	32043.7	24021.8	
A0A0G2K9Q0	A0A0G2K9Q0	A0A0G2K9Q0_RAT	Tbck	TBC1 domain containing kinase	1	QTSEFAAHLVK	QTSEFAAHLVK	3	QTSEFAAHLVK3	2148.63	1654.31	
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	QTSEILAAQNLLQK	QTSEILAAQNLLQK	2	QTSEILAAQNLLQK2	34534.3	25109.1	23275.9
A0A0U1RRU5	A0A0U1RRU5	A0A0U1RRU5_RAT	Tab1	TGF-beta activated kinase 1/MAP3K7 binding protein 1	1	QTSLDAVAQAVVDR	QTSLDAVAQAVVDR	2	QTSLDAVAQAVVDR2	6443.51	4545.86	1917.74
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	QTSLEPVAFR	QTSLEPVAFR	2	QTSLEPVAFR2	107718	129173	105316
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	QTSMFPR	QTSMFPR	2	QTSMFPR2	43517	27842.2	45857.6
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	QTSNCVLEICAEQR	QTSNC(UniMod:4)VLEIC(UniMod:4)AEQR	2	QTSNC(UniMod:4)VLEIC(UniMod:4)AEQR2	2710.77	3988.14	7390.04
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	QTSPQLIK	QTSPQLIK	2	QTSPQLIK2	10733	6035.04	8444.72
O35568	O35568	FBLN3_RAT	Efemp1	EGF-containing fibulin-like extracellular matrix protein 1	1	QTSPVSAMLVLVK	QTSPVSAMLVLVK	2	QTSPVSAMLVLVK2	18439.2	17786.6	13997.4
Q9JHY1	A0A8I6AER7;Q9JHY1	JAM1_RAT	F11r	Junctional adhesion molecule A	0	QTSSFLV	QTSSFLV	1	QTSSFLV1	141252	141081	136660
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	QTSSFQR	QTSSFQR	2	QTSSFQR2	87827.5	108930	93331.4
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	QTSSIFEAAK	QTSSIFEAAK	2	QTSSIFEAAK2	6469.35	10056.8	9701.26
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	QTSVGNTVLHYCSMYGKPECLK	QTSVGNTVLHYC(UniMod:4)SMYGKPEC(UniMod:4)LK	4	QTSVGNTVLHYC(UniMod:4)SMYGKPEC(UniMod:4)LK4	22191.8	23880.3	19699.4
Q99MH3	Q99MH3	HEPC_RAT	Hamp	Hepcidin	1	QTTALQPWHGAESK	QTTALQPWHGAESK	3	QTTALQPWHGAESK3	7445.97	6227.7	8878.21
Q32KJ6	Q32KJ6	GALNS_RAT	Galns	N-acetylgalactosamine-6-sulfatase	1	QTTFEGGMR	QTTFEGGMR	2	QTTFEGGMR2	13806.3	11886.9	18433.2
A0A8I6ADW6	A0A8I6ADW6	A0A8I6ADW6_RAT	ENSRNOG00000064626	Ig-like domain-containing protein	1	QTTGQGLEWIGIINPGSGGTSYNVK	QTTGQGLEWIGIINPGSGGTSYNVK	3	QTTGQGLEWIGIINPGSGGTSYNVK3	10240	11687	12170
A0A8I5Y817	A0A8I5Y817	A0A8I5Y817_RAT	ENSRNOG00000069868	Ig-like domain-containing protein	1	QTTGQGLEYIGYINTGSGGTNYNEK	QTTGQGLEYIGYINTGSGGTNYNEK	3	QTTGQGLEYIGYINTGSGGTNYNEK3	7968.8	9127.52	9220.23
P23785	P23785	GRN_RAT	Grn	Progranulin	1	QTTLLQHGDIGCDQHTSCPVGQTCCPSLK	QTTLLQHGDIGC(UniMod:4)DQHTSC(UniMod:4)PVGQTC(UniMod:4)C(UniMod:4)PSLK	4	QTTLLQHGDIGC(UniMod:4)DQHTSC(UniMod:4)PVGQTC(UniMod:4)C(UniMod:4)PSLK4	1999.84		3022.86
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	QTTPMTAQPPAPTFSLLQTR	QTTPMTAQPPAPTFSLLQTR	3	QTTPMTAQPPAPTFSLLQTR3	23740.2	28090.2	23718.6
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	QTTQAYYAIFLNK	QTTQAYYAIFLNK	2	QTTQAYYAIFLNK2	4254.88		2399.17
Q4V8E2	Q4V8E2	Q4V8E2_RAT	Psmd14	Proteasome 26S subunit, non-ATPase 14	1	QTTSNLGHLNKPSIQALIHGLNR	QTTSNLGHLNKPSIQALIHGLNR	3	QTTSNLGHLNKPSIQALIHGLNR3	2900.98	3871.39	
Q4V8E2	Q4V8E2	Q4V8E2_RAT	Psmd14	Proteasome 26S subunit, non-ATPase 14	1	QTTSNLGHLNKPSIQALIHGLNR	QTTSNLGHLNKPSIQALIHGLNR	4	QTTSNLGHLNKPSIQALIHGLNR4	49123.2	42476.5	38016.4
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	QTTSRPPPAGGR	QTTSRPPPAGGR	3	QTTSRPPPAGGR3			8934.05
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	QTTVIQDLK	QTTVIQDLK	2	QTTVIQDLK2	20122.2	20192.2	
P35213	P35213	1433B_RAT	Ywhab	14-3-3 protein beta/alpha	1	QTTVSNSQQAYQEAFEISK	QTTVSNSQQAYQEAFEISK	3	QTTVSNSQQAYQEAFEISK3	160901	167160	182887
P35213	P35213	1433B_RAT	Ywhab	14-3-3 protein beta/alpha	1	QTTVSNSQQAYQEAFEISKK	QTTVSNSQQAYQEAFEISKK	3	QTTVSNSQQAYQEAFEISKK3	96093.8	111999	114445
Q3KRD8	Q3KRD8	IF6_RAT	Eif6	Eukaryotic translation initiation factor 6	1	QTVADQVLVGSYCVFSNQGGLVHPK	QTVADQVLVGSYC(UniMod:4)VFSNQGGLVHPK	3	QTVADQVLVGSYC(UniMod:4)VFSNQGGLVHPK3	3529.18	4277.48	3588.12
P62630	P62632;P62630;F1M6C2;M0R757;A0A8I6AQI9	EF1A1_RAT	Eef1a1	Elongation factor 1-alpha 1	0	QTVAVGVIK	QTVAVGVIK	2	QTVAVGVIK2	124347	120686	116160
A0A8I5XWD7	A0A8I5XWD7;P0C644	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	0	QTVCGFDLLR	QTVC(UniMod:4)GFDLLR	2	QTVC(UniMod:4)GFDLLR2	9159.88	5049.04	7170.1
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	QTVEAMK	QTVEAMK	1	QTVEAMK1	689936	795131	709072
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	QTVEAMK	QTVEAMK	2	QTVEAMK2	18966.7	4.47004e+07	4.14505e+07
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	QTVEDEKLR	QTVEDEKLR	2	QTVEDEKLR2	9177	5751.28	6315.56
Q63009	Q63009;A0A0G2K9I8	ANM1_RAT	Prmt1	Protein arginine N-methyltransferase 1	0	QTVFYMEDYLTVK	QTVFYMEDYLTVK	2	QTVFYMEDYLTVK2	7555.58	10535.8	7279.89
Q6MG58	Q6MG58	LY66D_RAT	Ly6g6d	Lymphocyte antigen 6 complex locus protein G6d	1	QTVITCGEGER	QTVITC(UniMod:4)GEGER	2	QTVITC(UniMod:4)GEGER2	64300.4	53071.6	61202.8
Q6IRE4	Q6IRE4	TS101_RAT	Tsg101	Tumor susceptibility gene 101 protein	1	QTVNVIAMYK	QTVNVIAMYK	2	QTVNVIAMYK2	18198.9	14257.1	10809.5
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	QTVQGPSSTHSPDASALQLEQER	QTVQGPSSTHSPDASALQLEQER	3	QTVQGPSSTHSPDASALQLEQER3	8329.97	6887.6	5005.66
B5DEN9	B5DEN9	VPS28_RAT	Vps28	Vacuolar protein sorting-associated protein 28 homolog	1	QTVSQWLQTLSGMSASDELDDSQVR	QTVSQWLQTLSGMSASDELDDSQVR	3	QTVSQWLQTLSGMSASDELDDSQVR3	631.159	3721.85	3677.61
P18292	P18292	THRB_RAT	F2	Prothrombin	1	QTVTSLLQAGYK	QTVTSLLQAGYK	2	QTVTSLLQAGYK2	33629.2	29436	34218.6
P18292	P18292	THRB_RAT	F2	Prothrombin	1	QTVTSLLQAGYK	QTVTSLLQAGYK	3	QTVTSLLQAGYK3	1.55265e+06	1.5733e+06	1.72946e+06
P18292	P18292	THRB_RAT	F2	Prothrombin	1	QTVTSLLQAGYKGR	QTVTSLLQAGYKGR	2	QTVTSLLQAGYKGR2		3941.79	
P18292	P18292	THRB_RAT	F2	Prothrombin	1	QTVTSLLQAGYKGR	QTVTSLLQAGYKGR	3	QTVTSLLQAGYKGR3	18462.3	18068.9	19089.7
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	QTWHVSCFVCVACGKPIR	QTWHVSC(UniMod:4)FVC(UniMod:4)VAC(UniMod:4)GKPIR	4	QTWHVSC(UniMod:4)FVC(UniMod:4)VAC(UniMod:4)GKPIR4	7858	8544.63	6132.06
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	QTWNLQGQALEQAIISQKPQLEK	QTWNLQGQALEQAIISQKPQLEK	3	QTWNLQGQALEQAIISQKPQLEK3	14923.2	13239.1	13967.2
D3ZS97	D3ZS97	D3ZS97_RAT	Cd226	CD226 molecule	1	QTWSDCSQESMK	QTWSDC(UniMod:4)SQESMK	2	QTWSDC(UniMod:4)SQESMK2	280215	253189	328408
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	QTWTDEGSVSER	QTWTDEGSVSER	2	QTWTDEGSVSER2	9582.4	7119.25	5780.8
Q5XFW6	Q5XFW6	WDR6_RAT	Wdr6	WD repeat-containing protein 6	1	QTWVITGGDDSGIR	QTWVITGGDDSGIR	2	QTWVITGGDDSGIR2	12129.7	5322.9	14712.1
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	QTYFLPVIGLVDAEK	QTYFLPVIGLVDAEK	2	QTYFLPVIGLVDAEK2	28183.3	29119.8	22899.6
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	QTYFLPVIGLVDAEK	QTYFLPVIGLVDAEK	3	QTYFLPVIGLVDAEK3	17839.8	12134.8	15572.7
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	QTYGDMEVMLK	QTYGDMEVMLK	2	QTYGDMEVMLK2	36296.5	24295.8	37259.1
D3ZEI0	P17702;D3ZEI0	D3ZEI0_RAT	AABR07016623.1	60S ribosomal protein L28	0	QTYSTEPNNLK	QTYSTEPNNLK	2	QTYSTEPNNLK2	9971.2	14151.2	9017.96
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	QVAAASHFR	QVAAASHFR	2	QVAAASHFR2	4037.65	5264.49	5831.27
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	QVAASTAQLLVACK	QVAASTAQLLVAC(UniMod:4)K	2	QVAASTAQLLVAC(UniMod:4)K2	429510	408884	430994
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	QVAASTAQLLVACK	QVAASTAQLLVAC(UniMod:4)K	3	QVAASTAQLLVAC(UniMod:4)K3	291087	369622	319928
P51111	P51111	HD_RAT	Htt	Huntingtin	1	QVADIILPMLAK	QVADIILPMLAK	2	QVADIILPMLAK2	23759.2	14514	10279.5
Q6TUD4	Q6TUD4	YIPF3_RAT	Yipf3	Protein YIPF3	1	QVADQMWQAGK	QVADQMWQAGK	2	QVADQMWQAGK2	17322.1	30214.4	20942.3
Q6AYU3	A0A8I5ZVZ1;Q6AYU3	DNJB6_RAT	Dnajb6	DnaJ homolog subfamily B member 6	0	QVAEAYEVLSDAK	QVAEAYEVLSDAK	2	QVAEAYEVLSDAK2	12657	10907.8	7373.24
Q6AYU3	A0A8I5ZVZ1;Q6AYU3	DNJB6_RAT	Dnajb6	DnaJ homolog subfamily B member 6	0	QVAEAYEVLSDAKK	QVAEAYEVLSDAKK	3	QVAEAYEVLSDAKK3	7851.8	5817.01	2888.9
Q66H59	Q66H59	NPL_RAT	Npl	N-acetylneuraminate lyase	1	QVAEEWVR	QVAEEWVR	2	QVAEEWVR2	42962.3	49712.3	46686.6
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	QVAEMAECIGSALIQK	QVAEMAEC(UniMod:4)IGSALIQK	2	QVAEMAEC(UniMod:4)IGSALIQK2	3582.69	1886.39	3177.64
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	QVAEMAECIGSALIQK	QVAEMAEC(UniMod:4)IGSALIQK	3	QVAEMAEC(UniMod:4)IGSALIQK3	19278.9	24769.8	21957.5
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	QVAEVNHLEQQLEEANSVR	QVAEVNHLEQQLEEANSVR	3	QVAEVNHLEQQLEEANSVR3	15206.1	17097.4	
O55012	O55012	PICAL_RAT	Picalm	Phosphatidylinositol-binding clathrin assembly protein	1	QVAFDFTK	QVAFDFTK	2	QVAFDFTK2	23382.1	24902.8	13507.2
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	QVAFDLR	QVAFDLR	2	QVAFDLR2	11270.9	17720	14371.7
A0A8I6B124	A0A8I6B124	A0A8I6B124_RAT	Zswim8	Zinc finger, SWIM-type containing 8	1	QVAFHIPFEVVEK	QVAFHIPFEVVEK	3	QVAFHIPFEVVEK3	6358.76	4289.22	
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	QVAGTMK	QVAGTMK	1	QVAGTMK1	18253.1		10259.8
A0A8I6A5H5	A0A8I6ABJ7;A0A8I6A5H5	A0A8I6A5H5_RAT	Rela	RELA proto-oncogene, NF-kB subunit	0	QVAIVFR	QVAIVFR	2	QVAIVFR2	37223.7	30997.7	30222.1
Q99MB4	Q99MB4	ZNG1_RAT	Zng1	Zinc-regulated GTPase metalloprotein activator 1	1	QVALADMILINK	QVALADMILINK	2	QVALADMILINK2	2784.66	7390.29	4171.84
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	QVALWDTK	QVALWDTK	1	QVALWDTK1	14429.1	6882.76	7290.69
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	QVALWDTK	QVALWDTK	2	QVALWDTK2	773528	710907	727509
Q7TP54	Q7TP54	RIPR2_RAT	Ripor2	Rho family-interacting cell polarization regulator 2	1	QVAMVQTLQSLRDEK	QVAMVQTLQSLRDEK	3	QVAMVQTLQSLRDEK3	4663.84	5614.32	5914.29
Q63615	Q63615	VP33A_RAT	Vps33a	Vacuolar protein sorting-associated protein 33A	1	QVANMMVR	QVANMMVR	2	QVANMMVR2	2759.36		7890.74
P53565	P53565;A0A8I5ZR58	CUX1_RAT	Cux1	Homeobox protein cut-like 1	0	QVAPLLK	QVAPLLK	2	QVAPLLK2	15832	10731.4	10745.8
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	QVAQEQFFLMCTR	QVAQEQFFLMC(UniMod:4)TR	2	QVAQEQFFLMC(UniMod:4)TR2	18794	24326.4	14483.6
P0C2X9	P0C2X9	AL4A1_RAT	Aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1	QVAQNLDR	QVAQNLDR	2	QVAQNLDR2	47836.2	39733.8	54253.3
P67779	P67779;A0A8I5ZUY9	PHB1_RAT	Phb1	Prohibitin 1	0	QVAQQEAER	QVAQQEAER	2	QVAQQEAER2			38396.3
Q9JMJ4	Q9JMJ4	PRP19_RAT	Prpf19	Pre-mRNA-processing factor 19	1	QVASHVGLHSASIPGILALDLCPSDTNK	QVASHVGLHSASIPGILALDLC(UniMod:4)PSDTNK	4	QVASHVGLHSASIPGILALDLC(UniMod:4)PSDTNK4	11431.5		5556.67
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	QVASIPVLSGGTK	QVASIPVLSGGTK	2	QVASIPVLSGGTK2	31293.2	33436.5	47193.2
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	QVATALQNLQTK	QVATALQNLQTK	2	QVATALQNLQTK2	888645	763018	848953
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	QVATALQNLQTK	QVATALQNLQTK	3	QVATALQNLQTK3	13469.5	16321.4	12865.3
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	QVATIEK	QVATIEK	2	QVATIEK2	53683.3	53621.5	59505.9
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	QVAYIYK	QVAYIYK	1	QVAYIYK1	8715.62	9593.24	11943.8
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	QVAYIYK	QVAYIYK	2	QVAYIYK2	595813	546438	584513
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	QVCAGNTHFAVVTVEK	QVC(UniMod:4)AGNTHFAVVTVEK	3	QVC(UniMod:4)AGNTHFAVVTVEK3	29110.6	35863.7	34023.4
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	QVCAHIVQAIR	QVC(UniMod:4)AHIVQAIR	3	QVC(UniMod:4)AHIVQAIR3	37315.3	34649.7	25585.1
Q5XIG6	Q5XIG6	GALK2_RAT	Galk2	N-acetylgalactosamine kinase	1	QVCEAAPDNAVQLLGELMNQSHR	QVC(UniMod:4)EAAPDNAVQLLGELMNQSHR	3	QVC(UniMod:4)EAAPDNAVQLLGELMNQSHR3	6125.93		3899.75
B1WBW4	B1WBW4	ARM10_RAT	Armc10	Armadillo repeat-containing protein 10	1	QVCEDVFADPLNSAVQLAALR	QVC(UniMod:4)EDVFADPLNSAVQLAALR	3	QVC(UniMod:4)EDVFADPLNSAVQLAALR3	2935.63	4335.68	3399.38
A0A8I5YBR2	A0A8I5YBR2	A0A8I5YBR2_RAT	Cops6	COP9 signalosome complex subunit 6	1	QVCEIIESPLFLK	QVC(UniMod:4)EIIESPLFLK	2	QVC(UniMod:4)EIIESPLFLK2	33643.6	40389.3	33494.8
A0A8I5YBR2	A0A8I5YBR2	A0A8I5YBR2_RAT	Cops6	COP9 signalosome complex subunit 6	1	QVCEIIESPLFLK	QVC(UniMod:4)EIIESPLFLK	3	QVC(UniMod:4)EIIESPLFLK3	4046.39	4889.9	1371.86
D4A2G6	D4A2G6	D4A2G6_RAT	Thbs2	Thrombospondin 2	1	QVCEPENPCKDK	QVC(UniMod:4)EPENPC(UniMod:4)KDK	3	QVC(UniMod:4)EPENPC(UniMod:4)KDK3	12162.7	22022.3	20821
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	QVCMWNSVEHR	QVC(UniMod:4)MWNSVEHR	3	QVC(UniMod:4)MWNSVEHR3	22443.5	20785.1	11857.5
Q499N5	Q499N5	ACSF2_RAT	Acsf2	Medium-chain acyl-CoA ligase ACSF2, mitochondrial	1	QVCPELEK	QVC(UniMod:4)PELEK	2	QVC(UniMod:4)PELEK2	11567.5	8388.79	6262.17
A0A0G2JUC8	A0A0G2JUC8	A0A0G2JUC8_RAT	Rbx1	Ring-box 1	1	QVCPLDNR	QVC(UniMod:4)PLDNR	2	QVC(UniMod:4)PLDNR2	140984	146445	133393
A0A0G2JUC8	A0A0G2JUC8	A0A0G2JUC8_RAT	Rbx1	Ring-box 1	1	QVCPLDNREWEFQK	QVC(UniMod:4)PLDNREWEFQK	3	QVC(UniMod:4)PLDNREWEFQK3	15663.5	15981.3	13346
F7EUW3	F7EUW3	F7EUW3_RAT	C2cd2l	C2CD2-like	1	QVCPLTPGPGK	QVC(UniMod:4)PLTPGPGK	2	QVC(UniMod:4)PLTPGPGK2	37275.6	36729.2	30056.4
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	QVCQESQLICEPSFFQHLNK	QVC(UniMod:4)QESQLIC(UniMod:4)EPSFFQHLNK	3	QVC(UniMod:4)QESQLIC(UniMod:4)EPSFFQHLNK3	20197.1	15314.9	7127.38
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	QVCSGEQLANLDK	QVC(UniMod:4)SGEQLANLDK	2	QVC(UniMod:4)SGEQLANLDK2	10336.5	8617.33	11727.2
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	QVCTDINECETGQHNCVPNSVCVNTR	QVC(UniMod:4)TDINEC(UniMod:4)ETGQHNC(UniMod:4)VPNSVC(UniMod:4)VNTR	4	QVC(UniMod:4)TDINEC(UniMod:4)ETGQHNC(UniMod:4)VPNSVC(UniMod:4)VNTR4	80739.8	78532	80628.8
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	QVCTDVDECR	QVC(UniMod:4)TDVDEC(UniMod:4)R	2	QVC(UniMod:4)TDVDEC(UniMod:4)R2	2.04411e+06	2.10369e+06	1.98394e+06
Q5XHY5	Q5XHY5	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	1	QVDAESWK	QVDAESWK	2	QVDAESWK2	10974.8	9871.16	17939.9
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	QVDDFLASIASPSTEVLR	QVDDFLASIASPSTEVLR	2	QVDDFLASIASPSTEVLR2	4037.53		4459.93
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	QVDDLEVWSHTNDTIGSVR	QVDDLEVWSHTNDTIGSVR	3	QVDDLEVWSHTNDTIGSVR3	27260.4	26322.2	18544.1
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	QVDGDNSHVEMK	QVDGDNSHVEMK	2	QVDGDNSHVEMK2	5506.1	1737.04	2491.9
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	QVDGDNSHVEMK	QVDGDNSHVEMK	3	QVDGDNSHVEMK3	38059.3	24065.6	29616.8
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	QVDLDSR	QVDLDSR	2	QVDLDSR2	24746.6	36274.3	28729.8
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	QVDPAYTGR	QVDPAYTGR	2	QVDPAYTGR2	16342.8	13157.1	12307.4
P31000	P31000	VIME_RAT	Vim	Vimentin	1	QVDQLTNDK	QVDQLTNDK	2	QVDQLTNDK2	16770.3	9613.61	
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	QVDTLQK	QVDTLQK	2	QVDTLQK2	31716.4	29329.3	20392.5
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	QVDVADTESEESR	QVDVADTESEESR	2	QVDVADTESEESR2	2241.09	284.708	5052.25
B5DFN2	B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	1	QVDVVITCTGNK	QVDVVITC(UniMod:4)TGNK	2	QVDVVITC(UniMod:4)TGNK2	115817	105122	112408
Q9Z1L0	Q9Z1L0	PK3CB_RAT	Pik3cb	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform	1	QVEALNK	QVEALNK	2	QVEALNK2	6014.2		10091.7
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	QVEDDIQQLLK	QVEDDIQQLLK	2	QVEDDIQQLLK2	67148.5	56290.1	73292.5
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	QVEDDIQQLLKK	QVEDDIQQLLKK	3	QVEDDIQQLLKK3	6680.18	15504.8	15716.2
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	QVEDGEVFDFR	QVEDGEVFDFR	2	QVEDGEVFDFR2	33285.3	36900.2	38298.7
Q9WTV5	Q9WTV5	PSMD9_RAT	Psmd9	26S proteasome non-ATPase regulatory subunit 9	1	QVEEALHQLHAR	QVEEALHQLHAR	3	QVEEALHQLHAR3	19162.8	12553.1	25508.4
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	QVEELEEVPEETQAEHNLSSVLDK	QVEELEEVPEETQAEHNLSSVLDK	3	QVEELEEVPEETQAEHNLSSVLDK3	13791.2	1260.45	9738.81
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	QVEELYQSLLELGEK	QVEELYQSLLELGEK	2	QVEELYQSLLELGEK2	210218	129482	119834
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	QVEELYQSLLELGEK	QVEELYQSLLELGEK	3	QVEELYQSLLELGEK3	94171.9	70973.6	101248
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	QVEELYQSLLELGEKR	QVEELYQSLLELGEKR	3	QVEELYQSLLELGEKR3	4721.36	6203.48	
D4ACC1	D4ACC1	D4ACC1_RAT	Dapp1	Dual adaptor of phosphotyrosine and 3-phosphoinositides 1	1	QVEEPSIYESVR	QVEEPSIYESVR	2	QVEEPSIYESVR2	15759.9	14040.2	
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	QVEGDGCSFITQLVNHFWK	QVEGDGC(UniMod:4)SFITQLVNHFWK	3	QVEGDGC(UniMod:4)SFITQLVNHFWK3	4792.8	5723.33	8681.17
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	QVEHPLLSGLLYPGLQALDEEYLK	QVEHPLLSGLLYPGLQALDEEYLK	3	QVEHPLLSGLLYPGLQALDEEYLK3	4868.64	6289.22	7782.28
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	QVEILNQYPHFK	QVEILNQYPHFK	3	QVEILNQYPHFK3	26705.4	33089.4	22536.6
P61589	P61589;P62747;Q5XIM3;A0A8I6AN62	RHOA_RAT	Rhoa	Transforming protein RhoA	0	QVELALWDTAGQEDYDR	QVELALWDTAGQEDYDR	3	QVELALWDTAGQEDYDR3	59537.3	59216.8	58450.7
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	QVELELQQIEQK	QVELELQQIEQK	2	QVELELQQIEQK2	11317.5	7090.29	8755.58
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	QVEPLDPPAGSAPGER	QVEPLDPPAGSAPGER	2	QVEPLDPPAGSAPGER2	5275.8	9840.04	7011.27
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	QVEPPAK	QVEPPAK	2	QVEPPAK2	557616	458700	444514
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	QVEPPAKK	QVEPPAKK	2	QVEPPAKK2			26406.3
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	QVEQLEK	QVEQLEK	1	QVEQLEK1	222.469	1097.53	1467.16
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	QVEQLEK	QVEQLEK	2	QVEQLEK2	99873	84655.9	102421
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	QVESTQSMIR	QVESTQSMIR	2	QVESTQSMIR2	12400.3	12883.4	17888.1
Q8CG45	Q8CG45	ARK72_RAT	Akr7a2	Aflatoxin B1 aldehyde reductase member 2	1	QVETELLPCLR	QVETELLPC(UniMod:4)LR	2	QVETELLPC(UniMod:4)LR2	10001.3	9716.1	13107.3
G3V8V4	G3V8V4	G3V8V4_RAT	Cers2	Ceramide synthase 2	1	QVEVDLLSR	QVEVDLLSR	2	QVEVDLLSR2	65185.3	88647.5	63552.2
A0A8I6AMS6	A0A8I6AMS6	A0A8I6AMS6_RAT	Rangap1	RAN GTPase activating protein 1	1	QVEVINFGDCLVR	QVEVINFGDC(UniMod:4)LVR	2	QVEVINFGDC(UniMod:4)LVR2	7759.53	8275.01	4556.17
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	QVEVNVR	QVEVNVR	2	QVEVNVR2	24167.5	26814.7	28849.9
Q62902	Q62902	LMAN1_RAT	Lman1	Protein ERGIC-53	1	QVFEGQNR	QVFEGQNR	2	QVFEGQNR2	104932	103256	96503
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	QVFESDEAPDGNSYPDEQDDLK	QVFESDEAPDGNSYPDEQDDLK	3	QVFESDEAPDGNSYPDEQDDLK3	15507.6	16623.4	14436
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	QVFGQTTIHQHIPFNWDSEFVQLHFGK	QVFGQTTIHQHIPFNWDSEFVQLHFGK	4	QVFGQTTIHQHIPFNWDSEFVQLHFGK4		2874.14	2895.13
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	QVFKEEEEAIK	QVFKEEEEAIK	3	QVFKEEEEAIK3	6337.35	12694.3	20800.2
P62944	P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	QVFLATWK	QVFLATWK	2	QVFLATWK2	60611.3	60939.1	73634.1
D3ZQ80	D3ZQ80	D3ZQ80_RAT	Smg8	Nonsense-mediated mRNA decay factor SMG8	1	QVFPLFHHQDPGDPGPGIK	QVFPLFHHQDPGDPGPGIK	4	QVFPLFHHQDPGDPGPGIK4	7533.31	4784.24	8167.34
F7EXX5	F7EXX5	F7EXX5_RAT	Irf3	Interferon regulatory factor 3	1	QVFQQTLFCPGGLR	QVFQQTLFC(UniMod:4)PGGLR	2	QVFQQTLFC(UniMod:4)PGGLR2	5856.9	4071.36	
A0A8I5ZWI8	A0A8I5ZWI8	A0A8I5ZWI8_RAT	Dnajc19	DnaJ heat shock protein family (Hsp40) member C19	1	QVFQSLPK	QVFQSLPK	2	QVFQSLPK2	14306.9	16267.4	7478.81
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	QVFQVMEEQPPGTLVGTIPTRPGFTYR	QVFQVMEEQPPGTLVGTIPTRPGFTYR	4	QVFQVMEEQPPGTLVGTIPTRPGFTYR4		9188.2	5831.95
Q62656	Q62656	PTPRZ_RAT	Ptprz1	Receptor-type tyrosine-protein phosphatase zeta	1	QVFSSYTGK	QVFSSYTGK	2	QVFSSYTGK2	56466.9	61900.9	58735.3
Q8K4Y7	Q8K4Y7	CANT1_RAT	Cant1	Soluble calcium-activated nucleotidase 1	1	QVGALVPTHGFSSFK	QVGALVPTHGFSSFK	3	QVGALVPTHGFSSFK3	17214.1	17801.3	13336.4
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	QVGDAVAPGDCLDSIPR	QVGDAVAPGDC(UniMod:4)LDSIPR	2	QVGDAVAPGDC(UniMod:4)LDSIPR2	59233.2	47175.3	55032.6
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	QVGDAVAPGDCLDSIPR	QVGDAVAPGDC(UniMod:4)LDSIPR	3	QVGDAVAPGDC(UniMod:4)LDSIPR3	6191.49	13806.2	23302.2
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	QVGDIFSNPEAVLAK	QVGDIFSNPEAVLAK	2	QVGDIFSNPEAVLAK2	5434.83	7930.44	7274.48
P52303	P52303	AP1B1_RAT	Ap1b1	AP-1 complex subunit beta-1	1	QVGSISMDLQLTNK	QVGSISMDLQLTNK	2	QVGSISMDLQLTNK2	12883.8	10740.4	10367.3
Q63691	Q63691	CD14_RAT	Cd14	Monocyte differentiation antigen CD14	1	QVGVFPALATLDLSDNPELGEK	QVGVFPALATLDLSDNPELGEK	3	QVGVFPALATLDLSDNPELGEK3		2146.96	2609.95
A0A0U1RRU5	A0A0U1RRU5	A0A0U1RRU5_RAT	Tab1	TGF-beta activated kinase 1/MAP3K7 binding protein 1	1	QVGVICGQESTR	QVGVIC(UniMod:4)GQESTR	2	QVGVIC(UniMod:4)GQESTR2	7880.7	5994.87	6020.54
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	QVGYEDQWLQLLR	QVGYEDQWLQLLR	2	QVGYEDQWLQLLR2	9227.79	11302.2	8564.7
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	QVHAGNLSPPFSGGSTCPK	QVHAGNLSPPFSGGSTC(UniMod:4)PK	3	QVHAGNLSPPFSGGSTC(UniMod:4)PK3	51046.8	67350.9	54990.6
Q5BK09	Q5BK09	DRAM2_RAT	Dram2	DNA damage-regulated autophagy modulator protein 2	1	QVHALNPEENLIIK	QVHALNPEENLIIK	3	QVHALNPEENLIIK3	2609.07	3479.72	7177.35
O35165	O35165	GOSR2_RAT	Gosr2	Golgi SNAP receptor complex member 2	1	QVHEIQSHMGR	QVHEIQSHMGR	3	QVHEIQSHMGR3	18977.8	21641.1	16602.5
F1MAF8	F1MAF8	F1MAF8_RAT	Atg2b	Autophagy related 2B	1	QVHLLLDMLAAIAGPESSSK	QVHLLLDMLAAIAGPESSSK	3	QVHLLLDMLAAIAGPESSSK3	1642.91	3929.74	1466.62
Q00715	Q00715;A0A8I6A2W1;A0A8I6AGQ8;D3ZNZ9;A0A8I5ZLH6;A0A8I6A7P3;M0RBQ5;A0A8I5ZSA8;A0A8I6AFW8;Q00729;G3V9C7	H2B1_RAT		Histone H2B type 1	0	QVHPDTGISSK	QVHPDTGISSK	2	QVHPDTGISSK2	13764.1	3103.25	6844.52
Q00715	Q00715;A0A8I6A2W1;A0A8I6AGQ8;D3ZNZ9;A0A8I5ZLH6;A0A8I6A7P3;M0RBQ5;A0A8I5ZSA8;A0A8I6AFW8;Q00729;G3V9C7	H2B1_RAT		Histone H2B type 1	0	QVHPDTGISSK	QVHPDTGISSK	3	QVHPDTGISSK3	40975.1	18281.3	20899.5
F1LXS3	F1LXS3	F1LXS3_RAT	Matn2	Matrilin 2	1	QVHQPTESEPVTISIR	QVHQPTESEPVTISIR	3	QVHQPTESEPVTISIR3	3480.7	7986.69	
Q62598	Q62598	DSPP_RAT	Dspp	Dentin sialophosphoprotein	1	QVHSNGGYER	QVHSNGGYER	2	QVHSNGGYER2			41404.7
Q62598	Q62598	DSPP_RAT	Dspp	Dentin sialophosphoprotein	1	QVHSNGGYER	QVHSNGGYER	3	QVHSNGGYER3			70903.9
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	QVHYNEFIPQFEK	QVHYNEFIPQFEK	3	QVHYNEFIPQFEK3	16981.8	16310.2	18102.6
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	QVIAGVGTLEQEHAQYR	QVIAGVGTLEQEHAQYR	2	QVIAGVGTLEQEHAQYR2	18431.8	12445.6	15835.2
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	QVIAGVGTLEQEHAQYR	QVIAGVGTLEQEHAQYR	3	QVIAGVGTLEQEHAQYR3	371441	338047	418106
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	QVICLSGDDSSTCIGILAK	QVIC(UniMod:4)LSGDDSSTC(UniMod:4)IGILAK	3	QVIC(UniMod:4)LSGDDSSTC(UniMod:4)IGILAK3	3169.07	2502.65	
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	QVIDCQLADVNNLGK	QVIDC(UniMod:4)QLADVNNLGK	2	QVIDC(UniMod:4)QLADVNNLGK2	8802.43	10037.5	13434.6
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	QVIDCQLADVNNLGK	QVIDC(UniMod:4)QLADVNNLGK	3	QVIDC(UniMod:4)QLADVNNLGK3	4862.3	4858.34	
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	QVIEEAGK	QVIEEAGK	2	QVIEEAGK2	257879	296943	331081
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	QVIELAGK	QVIELAGK	2	QVIELAGK2	34230.6	41032	43675.7
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	QVIEVLETDPHFR	QVIEVLETDPHFR	2	QVIEVLETDPHFR2	17386.6	23592.6	10470.1
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	QVIEVLETDPHFR	QVIEVLETDPHFR	3	QVIEVLETDPHFR3	108341	120822	106890
F1LMQ3	F1LMQ3	F1LMQ3_RAT	Psmd8	26S proteasome non-ATPase regulatory subunit 8	1	QVIEYAR	QVIEYAR	2	QVIEYAR2	179203	230780	234594
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	QVIGTGSFFPK	QVIGTGSFFPK	2	QVIGTGSFFPK2	370899	317633	373433
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	QVIINLVNHK	QVIINLVNHK	2	QVIINLVNHK2	52045.5	32249.6	37289.6
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	QVIINLVNHK	QVIINLVNHK	3	QVIINLVNHK3	286374	253943	297813
P58751	P58751	RELN_RAT	Reln	Reelin	1	QVILEDSLDPVDTGNWLFFPGATVK	QVILEDSLDPVDTGNWLFFPGATVK	3	QVILEDSLDPVDTGNWLFFPGATVK3	31441.6	27290.7	33616.5
G3V7V5	G3V7V5	G3V7V5_RAT	Fkbp11	peptidylprolyl isomerase	1	QVIPGLEQSLLDMCVGEK	QVIPGLEQSLLDMC(UniMod:4)VGEK	3	QVIPGLEQSLLDMC(UniMod:4)VGEK3	7279.47	14023.2	14836.9
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	QVIPIIGK	QVIPIIGK	2	QVIPIIGK2	24477.8	38442.7	35004.3
P18614	P18614	ITA1_RAT	Itga1	Integrin alpha-1	1	QVIQDCEDENIQR	QVIQDC(UniMod:4)EDENIQR	2	QVIQDC(UniMod:4)EDENIQR2	3087.88	3270.56	3031.66
F7FJT3	F7FJT3	F7FJT3_RAT	Rad23a	UV excision repair protein RAD23	1	QVIQQNPALLPALLQQLGQENPQLLQQISR	QVIQQNPALLPALLQQLGQENPQLLQQISR	4	QVIQQNPALLPALLQQLGQENPQLLQQISR4	3739.39	5022.45	
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	QVIQTPLVDSLPVSR	QVIQTPLVDSLPVSR	2	QVIQTPLVDSLPVSR2	9870.03	5606.72	
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	QVIVNLVDQAGR	QVIVNLVDQAGR	2	QVIVNLVDQAGR2	19098.6	32728.9	19498.7
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	QVKPDPTPLLSSR	QVKPDPTPLLSSR	3	QVKPDPTPLLSSR3	51929.5	45429.5	68425.2
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	QVKPYVEEGLHPQIIIR	QVKPYVEEGLHPQIIIR	3	QVKPYVEEGLHPQIIIR3	62938.6	42813.1	53777.7
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	QVKPYVEEGLHPQIIIR	QVKPYVEEGLHPQIIIR	4	QVKPYVEEGLHPQIIIR4	315910	320966	324416
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	QVLAAQLER	QVLAAQLER	2	QVLAAQLER2	34829.5	40869.5	27120.2
Q5PQJ6	Q5PQJ6	P5CR3_RAT	Pycr3	Pyrroline-5-carboxylate reductase 3	1	QVLASAPTDK	QVLASAPTDK	2	QVLASAPTDK2	31496.3	41028.1	38303
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	QVLATWMK	QVLATWMK	2	QVLATWMK2	49004.2	46429.9	46104.6
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	QVLCYELFQSK	QVLC(UniMod:4)YELFQSK	2	QVLC(UniMod:4)YELFQSK2	8635.62	3981.64	3500.06
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	QVLDGYAVTYASSDGSSR	QVLDGYAVTYASSDGSSR	2	QVLDGYAVTYASSDGSSR2	4785.09	4385.55	12553.4
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	QVLDGYAVTYASSDGSSR	QVLDGYAVTYASSDGSSR	3	QVLDGYAVTYASSDGSSR3	4544.1	6105.3	4845.45
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	QVLDYPSPDVECAK	QVLDYPSPDVEC(UniMod:4)AK	2	QVLDYPSPDVEC(UniMod:4)AK2	121977	134051	135135
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	QVLDYPSPDVECAKK	QVLDYPSPDVEC(UniMod:4)AKK	3	QVLDYPSPDVEC(UniMod:4)AKK3	39169.5	39402.4	37271.7
F1MA10	F1MA10	F1MA10_RAT	Art4	NAD(P)(+)--arginine ADP-ribosyltransferase	1	QVLEELNQGDYFVR	QVLEELNQGDYFVR	2	QVLEELNQGDYFVR2	4552.07	2112.14	2351.26
Q63737	Q63737	PHLP_RAT	Pdcl	Phosducin-like protein	1	QVLEIPSGEGFLDMIDKEQK	QVLEIPSGEGFLDMIDKEQK	3	QVLEIPSGEGFLDMIDKEQK3	48925.2	69605.9	47631.7
D3ZXD8	D3ZXD8	TM245_RAT	Tmem245	Transmembrane protein 245	1	QVLELWDR	QVLELWDR	2	QVLELWDR2	125471	112232	112960
Q68FR6	A0A8I5Y6C6;Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	0	QVLEPSFR	QVLEPSFR	2	QVLEPSFR2	672302	757673	699647
P40241	P40241	CD9_RAT	Cd9	CD9 antigen	1	QVLESFQVK	QVLESFQVK	2	QVLESFQVK2	70069.8	52432	73829.5
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	QVLEVLSDLDLEQVSK	QVLEVLSDLDLEQVSK	2	QVLEVLSDLDLEQVSK2	8769.64	7500.51	10768.7
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	QVLEVLSDLDLEQVSK	QVLEVLSDLDLEQVSK	3	QVLEVLSDLDLEQVSK3	17474.4	16102.8	8932.19
Q6P691	Q6P691	Q6P691_RAT	C2cd2	C2 calcium-dependent domain containing 2	1	QVLEVNVLSEALK	QVLEVNVLSEALK	2	QVLEVNVLSEALK2	4130.79	5392.43	2916.46
P09117	P09117	ALDOC_RAT	Aldoc	Fructose-bisphosphate aldolase C	1	QVLFSADDR	QVLFSADDR	2	QVLFSADDR2	9688.84	5572.2	11235.3
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	QVLFTPATQAAR	QVLFTPATQAAR	2	QVLFTPATQAAR2	79531.9	93344.1	60780.5
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	QVLGLGLVK	QVLGLGLVK	2	QVLGLGLVK2	29576.3	29217.4	33087.6
E9PSQ0	E9PSQ0	E9PSQ0_RAT	Acacb	acetyl-CoA carboxylase	1	QVLIASHLPSYELR	QVLIASHLPSYELR	3	QVLIASHLPSYELR3	14601.9	17666	19384.2
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	QVLLAQAEAEK	QVLLAQAEAEK	2	QVLLAQAEAEK2	23958	27005.3	18945.4
G3V9A0	G3V9A0	G3V9A0_RAT	Plekhg2	Pleckstrin homology and RhoGEF domain containing G2	1	QVLLENSLHCAPK	QVLLENSLHC(UniMod:4)APK	3	QVLLENSLHC(UniMod:4)APK3		3308.17	6532.93
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	QVLLFNNPR	QVLLFNNPR	2	QVLLFNNPR2	80416.1	95896.3	87321.7
P28073	P28073;A0A0G2JSL0	PSB6_RAT	Psmb6	Proteasome subunit beta type-6	0	QVLLGDQIPK	QVLLGDQIPK	2	QVLLGDQIPK2	1.27312e+06	1.26028e+06	1.32912e+06
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	QVLLGPYNPDTSPEVGFFDVLGNDR	QVLLGPYNPDTSPEVGFFDVLGNDR	3	QVLLGPYNPDTSPEVGFFDVLGNDR3	15249.7	16139.8	22994.2
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	QVLLGPYNPDTSPEVGFFDVLGNDRR	QVLLGPYNPDTSPEVGFFDVLGNDRR	3	QVLLGPYNPDTSPEVGFFDVLGNDRR3	23657.2	18047.1	
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	QVLLSAAEAAEVILR	QVLLSAAEAAEVILR	2	QVLLSAAEAAEVILR2	19684.9	12822.6	15007.7
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	QVLLSAAEAAEVILR	QVLLSAAEAAEVILR	3	QVLLSAAEAAEVILR3	6473.98	7193.21	9775.38
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	QVLLSEPQEAAALYR	QVLLSEPQEAAALYR	2	QVLLSEPQEAAALYR2	86672.3	75034.1	85263.2
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	QVLLSEPQEAAALYR	QVLLSEPQEAAALYR	3	QVLLSEPQEAAALYR3	31880.9	29064.8	44382.9
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	QVLLSLEGSR	QVLLSLEGSR	2	QVLLSLEGSR2	92755.5	79070.5	110813
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	QVLLSLEGSRK	QVLLSLEGSRK	3	QVLLSLEGSRK3	8694.39	13020.7	8748.56
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	QVLLYDPQVNSPK	QVLLYDPQVNSPK	2	QVLLYDPQVNSPK2	14432	8779.63	13406.9
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	QVLMEQQQR	QVLMEQQQR	2	QVLMEQQQR2	4625.57	10438.4	15284.9
Q5XIB4	Q5XIB4	UFSP2_RAT	Ufsp2	Ufm1-specific protease 2	1	QVLNDLTTK	QVLNDLTTK	2	QVLNDLTTK2	6503.37	3670.82	8115.08
D3ZFS7	D3ZFS7	D3ZFS7_RAT	Lyplal1	palmitoyl-protein hydrolase	1	QVLNQDLTFQHIK	QVLNQDLTFQHIK	3	QVLNQDLTFQHIK3	3803.41	5920.14	9013.11
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	QVLPPSELLDHLFFHYEFQNQR	QVLPPSELLDHLFFHYEFQNQR	3	QVLPPSELLDHLFFHYEFQNQR3	24559.4	27522.6	33684.7
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	QVLPPSELLDHLFFHYEFQNQR	QVLPPSELLDHLFFHYEFQNQR	4	QVLPPSELLDHLFFHYEFQNQR4	37601.3	31868.7	32916.4
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	QVLPTPSTNR	QVLPTPSTNR	2	QVLPTPSTNR2	108980	107112	115541
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	QVLPTPSTNRVPSPGK	QVLPTPSTNRVPSPGK	3	QVLPTPSTNRVPSPGK3	6850.58	21227.9	15777.1
B1WBT4	B1WBT4	B1WBT4_RAT	Srpk2	SRSF protein kinase 2	1	QVLQGLDYLHSK	QVLQGLDYLHSK	3	QVLQGLDYLHSK3	18901.1	28632.6	25823.7
B2RYL4	B2RYL4	B2RYL4_RAT	Armc6	Armadillo repeat containing 6	1	QVLSALR	QVLSALR	2	QVLSALR2	6397.83		7667.96
P0C546	P0C546	S2542_RAT	Slc25a42	Mitochondrial coenzyme A transporter SLC25A42	1	QVLSSLLSGALAGALAK	QVLSSLLSGALAGALAK	3	QVLSSLLSGALAGALAK3	1745.76	2505.42	2274.48
Q5RJS6	Q5RJS6	MSPD1_RAT	Mospd1	Motile sperm domain-containing protein 1	1	QVLTLYNPYEFALK	QVLTLYNPYEFALK	2	QVLTLYNPYEFALK2	10678.2	5875.72	4779.82
D3ZU48	D3ZU48	D3ZU48_RAT	Klhdc4	Kelch domain containing 4	1	QVLTPSGLGVQPPPK	QVLTPSGLGVQPPPK	2	QVLTPSGLGVQPPPK2	13587	18166	17360.2
P01026	P01026	CO3_RAT	C3	Complement C3	1	QVLTSEK	QVLTSEK	1	QVLTSEK1		9463.69	13244.6
P01026	P01026	CO3_RAT	C3	Complement C3	1	QVLTSEK	QVLTSEK	2	QVLTSEK2		754426	671403
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	QVLVAPGNAGTASAGK	QVLVAPGNAGTASAGK	2	QVLVAPGNAGTASAGK2	14963.6	17180.7	13242
Q5XII0	Q5XII0	EPDR1_RAT	Epdr1	Mammalian ependymin-related protein 1	1	QVLYQQSSGHNSR	QVLYQQSSGHNSR	3	QVLYQQSSGHNSR3	5336.76	12443.9	7120.36
D4A2G6	D4A2G6	D4A2G6_RAT	Thbs2	Thrombospondin 2	1	QVMADSGPIYDQTYAGGR	QVMADSGPIYDQTYAGGR	2	QVMADSGPIYDQTYAGGR2	2827.06	2175.45	3424.16
D4A748	D4A748	D4A748_RAT	Wdfy4	WDFY family member 4	1	QVMCEAGMLR	QVMC(UniMod:4)EAGMLR	2	QVMC(UniMod:4)EAGMLR2	1386.84	1201.34	917.38
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	QVMMENK	QVMMENK	2	QVMMENK2	20911.4	18396.9	23960.2
A0A8I6ABF2	A0A8I6ABF2	A0A8I6ABF2_RAT	Lmf1	Lipase maturation factor	1	QVMNTSFNPLR	QVMNTSFNPLR	2	QVMNTSFNPLR2	4780.38	7912.06	4568.26
Q5XHY5	Q5XHY5	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	1	QVMVVPVGPTCDEYAQK	QVMVVPVGPTC(UniMod:4)DEYAQK	2	QVMVVPVGPTC(UniMod:4)DEYAQK2	18859.9	17339.8	13417.4
Q5XHY5	Q5XHY5	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	1	QVMVVPVGPTCDEYAQK	QVMVVPVGPTC(UniMod:4)DEYAQK	3	QVMVVPVGPTC(UniMod:4)DEYAQK3		1897.76	2555.24
D4ABI7	D4ABI7	D4ABI7_RAT	Hacd3	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase	1	QVNITVQK	QVNITVQK	2	QVNITVQK2	18086.5	30538.8	19666.5
P31211	P31211	CBG_RAT	Serpina6	Corticosteroid-binding globulin	1	QVNLYIPK	QVNLYIPK	1	QVNLYIPK1	9714.48	13447.9	9825.86
P31211	P31211	CBG_RAT	Serpina6	Corticosteroid-binding globulin	1	QVNLYIPK	QVNLYIPK	2	QVNLYIPK2	253633	200430	187850
O35397	O35397	CASP6_RAT	Casp6	Caspase-6	1	QVPCFASMLTK	QVPC(UniMod:4)FASMLTK	2	QVPC(UniMod:4)FASMLTK2	37971	45093.4	53785
D4A0W1	D4A0W1	D4A0W1_RAT	Emc4	ER membrane protein complex subunit 4	1	QVPDTSVQETDR	QVPDTSVQETDR	2	QVPDTSVQETDR2	49638.2	59567	59918.3
M0R692	M0R692	M0R692_RAT	ENSRNOG00000069250	Ig-like domain-containing protein	1	QVPGPSIEWIGWIYAGDGGTNYNQK	QVPGPSIEWIGWIYAGDGGTNYNQK	3	QVPGPSIEWIGWIYAGDGGTNYNQK3	11351	15362.4	16084.2
Q9ERE6	Q9ERE6	MPRIP_RAT	Mprip	Myosin phosphatase Rho-interacting protein	1	QVPIAPLHLSLEDR	QVPIAPLHLSLEDR	3	QVPIAPLHLSLEDR3	1403.56	4788.42	3709.28
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	QVPIVGDPPR	QVPIVGDPPR	2	QVPIVGDPPR2	44752.7	35503.5	39223.3
Q5U2Z3	Q5U2Z3	NP1L4_RAT	Nap1l4	Nucleosome assembly protein 1-like 4	1	QVPNESFFNFFSPLK	QVPNESFFNFFSPLK	2	QVPNESFFNFFSPLK2	81954.1	63635.6	96923
Q5U2Z3	Q5U2Z3	NP1L4_RAT	Nap1l4	Nucleosome assembly protein 1-like 4	1	QVPNESFFNFFSPLK	QVPNESFFNFFSPLK	3	QVPNESFFNFFSPLK3	5587.84	7390.15	6010.23
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	QVPVDVVEMK	QVPVDVVEMK	2	QVPVDVVEMK2	283971	242988	317552
P36860	P36860	RALB_RAT	Ralb	Ras-related protein Ral-B	1	QVPVEEAR	QVPVEEAR	2	QVPVEEAR2	357098	240676	341397
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	QVPVESDLQEIIK	QVPVESDLQEIIK	2	QVPVESDLQEIIK2	142410	154368	143716
B2RYN3	B2RYN3	B2RYN3_RAT	Eef1e1	Eukaryotic translation elongation factor 1 epsilon 1	1	QVPVLQTNNGPSLMGLSTIATHLVK	QVPVLQTNNGPSLMGLSTIATHLVK	3	QVPVLQTNNGPSLMGLSTIATHLVK3	14025.4	7281.51	18295.3
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	QVQAEVPGSPIFVMR	QVQAEVPGSPIFVMR	2	QVQAEVPGSPIFVMR2	9556.91	16167.6	10898.5
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	QVQEFLK	QVQEFLK	1	QVQEFLK1	8964.32	13042	9683.74
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	QVQEFLK	QVQEFLK	2	QVQEFLK2	200729	221648	236301
F1M9D0	F1M9D0	F1M9D0_RAT	Map3k2	Mitogen activated protein kinase kinase kinase 2	1	QVQFNPDSPETSK	QVQFNPDSPETSK	2	QVQFNPDSPETSK2	8226.93	7256.5	10289.7
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	QVQFYQGFGDLAILKPSNK	QVQFYQGFGDLAILKPSNK	3	QVQFYQGFGDLAILKPSNK3	13935.5	13215.2	14677.1
B5DEN9	B5DEN9	VPS28_RAT	Vps28	Vacuolar protein sorting-associated protein 28 homolog	1	QVQGSEISSIDEFCR	QVQGSEISSIDEFC(UniMod:4)R	2	QVQGSEISSIDEFC(UniMod:4)R2		4936.14	6852.23
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	QVQHILASASPSGR	QVQHILASASPSGR	2	QVQHILASASPSGR2	4570.29	3312.86	
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	QVQHILASASPSGR	QVQHILASASPSGR	3	QVQHILASASPSGR3	15983.3	35310	40005
Q6P9U8	Q6P9U8	EIF3H_RAT	Eif3h	Eukaryotic translation initiation factor 3 subunit H	1	QVQIDGLVVLK	QVQIDGLVVLK	2	QVQIDGLVVLK2	9717.56	14701.6	14114
D3Z9I1	D3Z9I1	D3Z9I1_RAT	Coa3	Cytochrome c oxidase assembly factor 3	1	QVQLAQWQK	QVQLAQWQK	2	QVQLAQWQK2	16880.4	13492.5	16061.2
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	QVQLLPGLR	QVQLLPGLR	2	QVQLLPGLR2	100108	83446.8	90949.1
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	QVQLLVSNQDVDNYK	QVQLLVSNQDVDNYK	2	QVQLLVSNQDVDNYK2	6366.72	8509.17	7578.14
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	QVQLLVTSQDVDNYK	QVQLLVTSQDVDNYK	2	QVQLLVTSQDVDNYK2	22120.5	23251.7	22631
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	QVQLLVTSQDVDNYK	QVQLLVTSQDVDNYK	3	QVQLLVTSQDVDNYK3	16010.5	22964.4	15666.8
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	QVQLSEEHWVHESGR	QVQLSEEHWVHESGR	4	QVQLSEEHWVHESGR4	5371.62		
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	QVQLSEEHWVHESGRPVQR	QVQLSEEHWVHESGRPVQR	3	QVQLSEEHWVHESGRPVQR3	4921.63	5878.2	3918.84
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	QVQLSEEHWVHESGRPVQR	QVQLSEEHWVHESGRPVQR	4	QVQLSEEHWVHESGRPVQR4	17474.9	21518.7	18095
D4A6D9	D4A6D9	D4A6D9_RAT	Hs1bp3	HCLS1 binding protein 3	1	QVQNAHTGLDLTVPQHQEVR	QVQNAHTGLDLTVPQHQEVR	4	QVQNAHTGLDLTVPQHQEVR4	4352.14	6093.03	7685.86
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	QVQNLVNK	QVQNLVNK	2	QVQNLVNK2	9367.87		11624.7
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	QVQPEGPYR	QVQPEGPYR	2	QVQPEGPYR2	31148.1	17036.2	15985.6
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	QVQPTMSK	QVQPTMSK	1	QVQPTMSK1	2571.34	3184.05	
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	QVQPTMSK	QVQPTMSK	2	QVQPTMSK2	223813	266764	242130
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	QVQQNSLHR	QVQQNSLHR	2	QVQQNSLHR2			9414.9
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	QVQSLLELR	QVQSLLELR	2	QVQSLLELR2	59700.3	55198.5	66811.2
D3ZER2	D3ZER2	BFSP2_RAT	Bfsp2	Phakinin	1	QVQSLQAETESLR	QVQSLQAETESLR	2	QVQSLQAETESLR2	5650.51		4591.76
P31000	P31000	VIME_RAT	Vim	Vimentin	1	QVQSLTCEVDALK	QVQSLTC(UniMod:4)EVDALK	2	QVQSLTC(UniMod:4)EVDALK2	5019.33		
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	QVQVEICELK	QVQVEIC(UniMod:4)ELK	2	QVQVEIC(UniMod:4)ELK2	7398.12	8211.83	9763.83
P01026	P01026	CO3_RAT	C3	Complement C3	1	QVREPGQDLVVLSLPITPEFIPSFR	QVREPGQDLVVLSLPITPEFIPSFR	3	QVREPGQDLVVLSLPITPEFIPSFR3	11087.4	18772.1	12440
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	QVRPGMDLSR	QVRPGMDLSR	3	QVRPGMDLSR3	23630.7	26095.4	34863.3
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	QVSALTVDTEER	QVSALTVDTEER	2	QVSALTVDTEER2	10262.2	7992.8	11582.3
P08689	P08689	SHBG_RAT	Shbg	Sex hormone-binding globulin	1	QVSASLADHPQLSMR	QVSASLADHPQLSMR	3	QVSASLADHPQLSMR3	32599.2	37504.8	26947.8
P67779	P67779;A0A8I5ZUY9	PHB1_RAT	Phb1	Prohibitin 1	0	QVSDDLTER	QVSDDLTER	2	QVSDDLTER2	98042.9	99954.4	100306
P25236	P25236	SEPP1_RAT	Selenop	Selenoprotein P	1	QVSDHIAVYR	QVSDHIAVYR	2	QVSDHIAVYR2	41572	22279	37996.3
P25236	P25236	SEPP1_RAT	Selenop	Selenoprotein P	1	QVSDHIAVYR	QVSDHIAVYR	3	QVSDHIAVYR3	741195	663548	712666
Q9WVB1	Q9WVB1	RAB6A_RAT	Rab6a	Ras-related protein Rab-6A	1	QVSIEEGER	QVSIEEGER	2	QVSIEEGER2	395117	373617	381023
Q9WVB1	Q9WVB1	RAB6A_RAT	Rab6a	Ras-related protein Rab-6A	1	QVSIEEGERK	QVSIEEGERK	2	QVSIEEGERK2	19170.8	10932.8	17711.9
Q9WVB1	Q9WVB1	RAB6A_RAT	Rab6a	Ras-related protein Rab-6A	1	QVSIEEGERK	QVSIEEGERK	3	QVSIEEGERK3	99597	115469	120325
A0A8I6AHQ9	A0A8I6AHQ9	A0A8I6AHQ9_RAT	Xpot	Exportin-T	1	QVSLADSLNHAVGFASR	QVSLADSLNHAVGFASR	3	QVSLADSLNHAVGFASR3	15352.4	9803.31	11103.5
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	QVSLETWLQR	QVSLETWLQR	2	QVSLETWLQR2	47040.7	47458	44929.6
A0A0G2K1A2	A0A0G2K1A2	A0A0G2K1A2_RAT	Mpo	Myeloperoxidase	1	QVSNAIVR	QVSNAIVR	2	QVSNAIVR2	43493.2	23522.7	31103
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	QVSNGHIAYFPAMK	QVSNGHIAYFPAMK	2	QVSNGHIAYFPAMK2	1068.59		2520.04
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	QVSNGHIAYFPAMK	QVSNGHIAYFPAMK	3	QVSNGHIAYFPAMK3	40762	54202.5	53907.7
D3ZCJ3	D3ZCJ3	D3ZCJ3_RAT	Mfsd6	Major facilitator superfamily domain containing 6	1	QVSPAGGAQCAPHETHSDSPR	QVSPAGGAQC(UniMod:4)APHETHSDSPR	3	QVSPAGGAQC(UniMod:4)APHETHSDSPR3	10762.6	11400.9	6469.51
D3ZCJ3	D3ZCJ3	D3ZCJ3_RAT	Mfsd6	Major facilitator superfamily domain containing 6	1	QVSPAGGAQCAPHETHSDSPR	QVSPAGGAQC(UniMod:4)APHETHSDSPR	4	QVSPAGGAQC(UniMod:4)APHETHSDSPR4	22515.7	36659.1	17582
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	QVSPNLER	QVSPNLER	2	QVSPNLER2	32469	33546.6	12529.4
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	QVSSECQGEMLDYR	QVSSEC(UniMod:4)QGEMLDYR	2	QVSSEC(UniMod:4)QGEMLDYR2	8302.29	5819.45	9267.22
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	QVSSECQGEMLDYRR	QVSSEC(UniMod:4)QGEMLDYRR	3	QVSSEC(UniMod:4)QGEMLDYRR3	9390.59	10350.4	10762.9
P31722	P31722	C1QC_RAT	C1qc	Complement C1q subcomponent subunit C	1	QVSSGGVLLR	QVSSGGVLLR	2	QVSSGGVLLR2	19647.6	19476.4	19467.9
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	QVSSLLTNHLAR	QVSSLLTNHLAR	3	QVSSLLTNHLAR3	3698.64	6969.69	5870.03
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	QVSSLVLHIEEAHK	QVSSLVLHIEEAHK	4	QVSSLVLHIEEAHK4	5622.22		
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	QVSSTLERPEK	QVSSTLERPEK	2	QVSSTLERPEK2	15512.6	13910.6	7514.29
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	QVSSTLERPEK	QVSSTLERPEK	3	QVSSTLERPEK3	276693	294689	194337
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	QVSTAMAEEIRR	QVSTAMAEEIRR	3	QVSTAMAEEIRR3	36776.1	40298.4	29050
Q99P75	Q99P75	RAB9A_RAT	Rab9a	Ras-related protein Rab-9A	1	QVSTEEAQAWCK	QVSTEEAQAWC(UniMod:4)K	2	QVSTEEAQAWC(UniMod:4)K2	5617.58	7028.87	6112.55
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	QVSTENESTLVHR	QVSTENESTLVHR	3	QVSTENESTLVHR3	10483.8	15725.5	18462.9
P63322	P63322	RALA_RAT	Rala	Ras-related protein Ral-A	1	QVSVEEAK	QVSVEEAK	1	QVSVEEAK1	1017.88		
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	QVSVSCTEGFTYDGADR	QVSVSC(UniMod:4)TEGFTYDGADR	2	QVSVSC(UniMod:4)TEGFTYDGADR2	3237.04		2386.76
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	QVSYFITGGDALGQFAVENMQNDWR	QVSYFITGGDALGQFAVENMQNDWR	3	QVSYFITGGDALGQFAVENMQNDWR3	4306.35	4268.87	6470.02
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	QVSYLASIVR	QVSYLASIVR	2	QVSYLASIVR2	3878.65	5500.89	8933.57
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	QVSYVGLVTVYAYSHSVSMVR	QVSYVGLVTVYAYSHSVSMVR	3	QVSYVGLVTVYAYSHSVSMVR3	45566.8	37872	52668.8
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	QVSYVGLVTVYAYSHSVSMVRGETGFIR	QVSYVGLVTVYAYSHSVSMVRGETGFIR	4	QVSYVGLVTVYAYSHSVSMVRGETGFIR4	45907.7	40805.6	26923.9
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	QVTAYNAVNNSTVSR	QVTAYNAVNNSTVSR	2	QVTAYNAVNNSTVSR2	9305.7	8427.17	6883.91
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	QVTAYNAVNNSTVSR	QVTAYNAVNNSTVSR	3	QVTAYNAVNNSTVSR3	10226.4	11500.3	11892.5
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	QVTEHDGQSLVK	QVTEHDGQSLVK	3	QVTEHDGQSLVK3	3940.39	5504.5	7533.28
A0A8I6AH91	A0A8I6AH91	A0A8I6AH91_RAT	Pcbp1	Poly(rC) binding protein 1	1	QVTITGSAASISLAQYLINAR	QVTITGSAASISLAQYLINAR	3	QVTITGSAASISLAQYLINAR3	7745.81		3395.59
Q6AYU2	Q6AYU2	Q6AYU2_RAT	Pcbp2	Poly(rC) binding protein 2	1	QVTITGSAASISLAQYLINVR	QVTITGSAASISLAQYLINVR	3	QVTITGSAASISLAQYLINVR3	3253.34	3228.06	647.881
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	QVTLGAFGHEEEVISNPLSPR	QVTLGAFGHEEEVISNPLSPR	3	QVTLGAFGHEEEVISNPLSPR3	9306.11	6385.22	13785.6
D3ZU48	D3ZU48	D3ZU48_RAT	Klhdc4	Kelch domain containing 4	1	QVTLSDLYCLDLHK	QVTLSDLYC(UniMod:4)LDLHK	3	QVTLSDLYC(UniMod:4)LDLHK3	5383.73	9285.13	7076.3
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	QVTNAVLK	QVTNAVLK	2	QVTNAVLK2	63431.9	83998.2	66395.4
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	QVTPDGESDEVGVIPSK	QVTPDGESDEVGVIPSK	2	QVTPDGESDEVGVIPSK2	15465.1	14537.5	21055.8
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	QVTPDGESDEVGVIPSKR	QVTPDGESDEVGVIPSKR	3	QVTPDGESDEVGVIPSKR3	2853.69	7462.53	
Q5BJU0	Q5BJU0	Q5BJU0_RAT	Rras2	RAS related 2	1	QVTQEEGQQLAR	QVTQEEGQQLAR	2	QVTQEEGQQLAR2	21138.9	21134.4	16240.8
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	QVTQLAIDTEER	QVTQLAIDTEER	2	QVTQLAIDTEER2	30329.9	27083.1	24304.3
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	QVTQSYWDTNPTR	QVTQSYWDTNPTR	2	QVTQSYWDTNPTR2	1.70277e+06	1.91108e+06	1.99204e+06
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	QVTQSYWDTNPTR	QVTQSYWDTNPTR	3	QVTQSYWDTNPTR3	195852	215335	216502
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	QVTSLLR	QVTSLLR	2	QVTSLLR2	30352.9	27559.5	30919.2
Q07647	Q07647	GTR3_RAT	Slc2a3	Solute carrier family 2, facilitated glucose transporter member 3	1	QVTVLELFK	QVTVLELFK	2	QVTVLELFK2	790191	721913	740782
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	QVTYQGQR	QVTYQGQR	2	QVTYQGQR2	103638	111024	112113
P19313	D3ZP68;P19313	CYTS_RAT	Cst4	Cystatin-S	0	QVVAGTK	QVVAGTK	1	QVVAGTK1	24312.2	21483.1	
P01041	P01041	CYTB_RAT	Cstb	Cystatin-B	1	QVVAGTNFFIK	QVVAGTNFFIK	2	QVVAGTNFFIK2	26410.9	28548.1	36096.3
P11505	Q64542;Q64568;P11505;P11506	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	0	QVVAVTGDGTNDGPALK	QVVAVTGDGTNDGPALK	2	QVVAVTGDGTNDGPALK2	18721	21532.4	16229
P11505	Q64542;Q64568;P11505;P11506	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	0	QVVAVTGDGTNDGPALKK	QVVAVTGDGTNDGPALKK	3	QVVAVTGDGTNDGPALKK3	14029.8	10398.3	20026.4
G3V8G2	G3V8G2	G3V8G2_RAT	Psmd5	26S proteasome non-ATPase regulatory subunit 5	1	QVVCCIGGENLSVAK	QVVC(UniMod:4)C(UniMod:4)IGGENLSVAK	2	QVVC(UniMod:4)C(UniMod:4)IGGENLSVAK2	21076.5	19760.9	18384.6
G3V8G2	G3V8G2	G3V8G2_RAT	Psmd5	26S proteasome non-ATPase regulatory subunit 5	1	QVVCCIGGENLSVAK	QVVC(UniMod:4)C(UniMod:4)IGGENLSVAK	3	QVVC(UniMod:4)C(UniMod:4)IGGENLSVAK3	5372.22		3683.45
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	QVVCDLGNPMK	QVVC(UniMod:4)DLGNPMK	2	QVVC(UniMod:4)DLGNPMK2	127269	141047	135032
Q8K4V4	Q8K4V4;Q5I0L6	SNX27_RAT	Snx27	Sorting nexin-27	0	QVVDLIR	QVVDLIR	2	QVVDLIR2	19439.7		28961.3
P04642	P04642;A0A8I6ASS6	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	QVVDSAYEVIK	QVVDSAYEVIK	2	QVVDSAYEVIK2	753383	732655	772892
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	QVVEAEK	QVVEAEK	2	QVVEAEK2	23496.5		34917.6
Q925D6	Q925D6	Q925D6_RAT	Map2k6	Mitogen-activated protein kinase kinase 6	1	QVVEEPSPQLPADK	QVVEEPSPQLPADK	2	QVVEEPSPQLPADK2		9584.89	10390.3
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	QVVELQNR	QVVELQNR	2	QVVELQNR2	27920.9	33077.9	30720
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	QVVEVETQK	QVVEVETQK	2	QVVEVETQK2	2103.9	2373.22	6233.34
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	QVVFTHR	QVVFTHR	2	QVVFTHR2	6147.8	19817.1	
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	QVVHLNLAEDCMNK	QVVHLNLAEDC(UniMod:4)MNK	3	QVVHLNLAEDC(UniMod:4)MNK3	28364.9	25250	21774.5
P08644	Q04970;P08644;P20171	RASK_RAT	Kras	GTPase KRas	0	QVVIDGETCLLDILDTAGQEEYSAMR	QVVIDGETC(UniMod:4)LLDILDTAGQEEYSAMR	3	QVVIDGETC(UniMod:4)LLDILDTAGQEEYSAMR3	3261.52	6276.98	5328.3
P36372	P36372	TAP2_RAT	Tap2	Antigen peptide transporter 2	1	QVVLVGQEPVLFSGSVK	QVVLVGQEPVLFSGSVK	2	QVVLVGQEPVLFSGSVK2	34920.9	55990.2	59444.2
P36372	P36372	TAP2_RAT	Tap2	Antigen peptide transporter 2	1	QVVLVGQEPVLFSGSVK	QVVLVGQEPVLFSGSVK	3	QVVLVGQEPVLFSGSVK3	7044.93	16572.1	11054.4
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	QVVLYSIR	QVVLYSIR	2	QVVLYSIR2	30864.2	45577.6	43535.4
P29314	M0RB65;P29314	RS9_RAT	Rps9	Small ribosomal subunit protein uS4	0	QVVNIPSFIVR	QVVNIPSFIVR	2	QVVNIPSFIVR2	20251.9	23518.6	33922.4
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	QVVNQVWEAADVLIK	QVVNQVWEAADVLIK	2	QVVNQVWEAADVLIK2	3246.8	2113.26	
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	QVVNQVWEAADVLIK	QVVNQVWEAADVLIK	3	QVVNQVWEAADVLIK3	8137.96	15991.6	15434.5
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	QVVPFSSSV	QVVPFSSSV	1	QVVPFSSSV1	29619	22310.8	17808.4
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	QVVPFSSSV	QVVPFSSSV	2	QVVPFSSSV2	3078.36	2910.95	4912.63
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	QVVQDLLK	QVVQDLLK	2	QVVQDLLK2	4096.74	4129.34	12422.1
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	QVVSVETTR	QVVSVETTR	2	QVVSVETTR2	73151.7	70129.5	67386.6
A0A8I6AE33	A0A8I6AE33	A0A8I6AE33_RAT	Wdr37	WD repeat domain 37	1	QVVTASWDR	QVVTASWDR	2	QVVTASWDR2	38233.3	48026.6	39543
P21775	P07871;P21775	THIKA_RAT	Acaa1a	3-ketoacyl-CoA thiolase A, peroxisomal	0	QVVTLLNELK	QVVTLLNELK	2	QVVTLLNELK2	42292.2	27592.3	38907.1
B5DFN2	D3ZWL6;B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	0	QVVVCGYGEVGK	QVVVC(UniMod:4)GYGEVGK	2	QVVVC(UniMod:4)GYGEVGK2	43237.2	39881.1	56558.9
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	QVWGLNFGSK	QVWGLNFGSK	2	QVWGLNFGSK2	228208	227051	195782
P15384	P63142;P10499;P15384;P17659	KCNA3_RAT	Kcna3	Potassium voltage-gated channel subfamily A member 3	0	QVWLLFEYPESSGPAR	QVWLLFEYPESSGPAR	2	QVWLLFEYPESSGPAR2	24754.5	26164.2	29766.2
P15384	P63142;P10499;P15384;P17659	KCNA3_RAT	Kcna3	Potassium voltage-gated channel subfamily A member 3	0	QVWLLFEYPESSGPAR	QVWLLFEYPESSGPAR	3	QVWLLFEYPESSGPAR3	8725.83	6479.41	7438.47
P41350	P41350	CAV1_RAT	Cav1	Caveolin-1	1	QVYDAHTK	QVYDAHTK	2	QVYDAHTK2			7117.53
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	QVYDIAAK	QVYDIAAK	2	QVYDIAAK2		16567.7	7177.43
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	QVYIGNALEYVLK	QVYIGNALEYVLK	2	QVYIGNALEYVLK2	12712.6	4348.25	8060.32
P48450	P48450	LSS_RAT	Lss	Lanosterol synthase	1	QVYLPMSYCYATR	QVYLPMSYC(UniMod:4)YATR	2	QVYLPMSYC(UniMod:4)YATR2	4595.8	6322.08	3790.68
A0A8I6AK45	A0A8I6AK45	A0A8I6AK45_RAT	Mtch2	Mitochondrial carrier 2	1	QVYQLPGLFCYAQHIASIDGK	QVYQLPGLFC(UniMod:4)YAQHIASIDGK	3	QVYQLPGLFC(UniMod:4)YAQHIASIDGK3	17724.4	20885.1	25465.5
A0A8I6AK45	A0A8I6AK45	A0A8I6AK45_RAT	Mtch2	Mitochondrial carrier 2	1	QVYQLPGLFCYAQHIASIDGKR	QVYQLPGLFC(UniMod:4)YAQHIASIDGKR	3	QVYQLPGLFC(UniMod:4)YAQHIASIDGKR3	3367.77	5967.56	9685.05
A0A8I6AK45	A0A8I6AK45	A0A8I6AK45_RAT	Mtch2	Mitochondrial carrier 2	1	QVYQLPGLFCYAQHIASIDGKR	QVYQLPGLFC(UniMod:4)YAQHIASIDGKR	4	QVYQLPGLFC(UniMod:4)YAQHIASIDGKR4	20839.5	13505	15326.5
P27274	P27274	CD59_RAT	Cd59	CD59 glycoprotein	1	QVYQQCWR	QVYQQC(UniMod:4)WR	2	QVYQQC(UniMod:4)WR2	62134.1	64613.7	56014.5
D3ZNV6	D3ZNV6	D3ZNV6_RAT	Elmod2	ELMO domain containing 2	1	QWADIGFQGDDPK	QWADIGFQGDDPK	2	QWADIGFQGDDPK2	2158.43	9073.67	5636.37
A0A8I6A502	A0A8I6A502	A0A8I6A502_RAT	Tns3	Tensin 3	1	QWAESSPK	QWAESSPK	2	QWAESSPK2	5907.88	6662.99	9638.97
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	QWAETWVLTLAGVAR	QWAETWVLTLAGVAR	2	QWAETWVLTLAGVAR2	1629.77	1717.62	
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	QWANLMEK	QWANLMEK	2	QWANLMEK2	255489	292161	226003
P62836	P62836	RAP1A_RAT	Rap1a	Ras-related protein Rap-1A	1	QWCNCAFLESSAK	QWC(UniMod:4)NC(UniMod:4)AFLESSAK	2	QWC(UniMod:4)NC(UniMod:4)AFLESSAK2	260301	247088	234095
P62836	P62836	RAP1A_RAT	Rap1a	Ras-related protein Rap-1A	1	QWCNCAFLESSAK	QWC(UniMod:4)NC(UniMod:4)AFLESSAK	3	QWC(UniMod:4)NC(UniMod:4)AFLESSAK3	13142.1	10930.4	13715.8
Q5XIP1	Q5XIP1	PELO_RAT	Pelo	Protein pelota homolog	1	QWDSVVLER	QWDSVVLER	2	QWDSVVLER2	4991.75		4398.49
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	QWECDGENDCHDHSDEAPK	QWEC(UniMod:4)DGENDC(UniMod:4)HDHSDEAPK	3	QWEC(UniMod:4)DGENDC(UniMod:4)HDHSDEAPK3	5565.99	6752.83	6707.39
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	QWECDGENDCHDHSDEAPK	QWEC(UniMod:4)DGENDC(UniMod:4)HDHSDEAPK	4	QWEC(UniMod:4)DGENDC(UniMod:4)HDHSDEAPK4	16993.9	12201	11389
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	QWELLLEK	QWELLLEK	2	QWELLLEK2	171086	271749	225006
Q6QBQ4	Q6QBQ4	PLS3_RAT	Plscr3	Phospholipid scramblase 3	1	QWGGLLR	QWGGLLR	2	QWGGLLR2	26459.9	24871.9	23611.8
P24049	D3Z9G9;A0A8I5ZRW8;A0A8I6A6U8;P24049;A0A8I5ZUD0	RL17_RAT	Rpl17	Large ribosomal subunit protein uL22	0	QWGWTQGR	QWGWTQGR	2	QWGWTQGR2	34028.1	36801.9	25815.4
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	QWHMASEK	QWHMASEK	2	QWHMASEK2	598528	646881	588930
A0A8I6A6W3	A0A0G2KAE1;A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	0	QWHVEHFVCAK	QWHVEHFVC(UniMod:4)AK	2	QWHVEHFVC(UniMod:4)AK2	30046.2	22840.4	19282.1
A0A8I6A6W3	A0A0G2KAE1;A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	0	QWHVEHFVCAK	QWHVEHFVC(UniMod:4)AK	3	QWHVEHFVC(UniMod:4)AK3	195177	172983	196257
B9TQX4	B9TQX4	UCMA_RAT	Ucma	Unique cartilage matrix-associated protein	1	QWHYDGLYPSYLYNR	QWHYDGLYPSYLYNR	3	QWHYDGLYPSYLYNR3	6421.05	14019.8	9043.83
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	QWILTAAHCFDGIPYPDVWR	QWILTAAHC(UniMod:4)FDGIPYPDVWR	3	QWILTAAHC(UniMod:4)FDGIPYPDVWR3	90077.1	103031	86616.1
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	QWKPALVVLTEK	QWKPALVVLTEK	2	QWKPALVVLTEK2	12204.7	6803.29	1456.61
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	QWKPALVVLTEK	QWKPALVVLTEK	3	QWKPALVVLTEK3	168560	149328	150466
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	QWLCDGSDDCGDGSDEAAHCEGK	QWLC(UniMod:4)DGSDDC(UniMod:4)GDGSDEAAHC(UniMod:4)EGK	3	QWLC(UniMod:4)DGSDDC(UniMod:4)GDGSDEAAHC(UniMod:4)EGK3	8737.7	8292.28	6520.64
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	QWLDLHLYHEIPTSLLILSR	QWLDLHLYHEIPTSLLILSR	3	QWLDLHLYHEIPTSLLILSR3	3425.9	13261.8	7208.19
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	QWLDLHLYHEIPTSLLILSR	QWLDLHLYHEIPTSLLILSR	4	QWLDLHLYHEIPTSLLILSR4	48206	42240.5	41714.6
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	QWLEALGGK	QWLEALGGK	2	QWLEALGGK2	28968.9	28853.7	33391.7
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	QWLEASSQLEEASIYSR	QWLEASSQLEEASIYSR	3	QWLEASSQLEEASIYSR3	7207.95	5513.88	7409.91
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	QWLIDTLYAFNSGDVDR	QWLIDTLYAFNSGDVDR	3	QWLIDTLYAFNSGDVDR3	4644.44		3485.81
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	QWLIDTLYAFNSGDVDRFQTLK	QWLIDTLYAFNSGDVDRFQTLK	3	QWLIDTLYAFNSGDVDRFQTLK3	2428.43	1998.22	2627.12
P10247	P10247	HG2A_RAT	Cd74	H-2 class II histocompatibility antigen gamma chain	1	QWLLFEMSK	QWLLFEMSK	2	QWLLFEMSK2	7784.96	4150.04	
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	QWLLQTHWTLDK	QWLLQTHWTLDK	2	QWLLQTHWTLDK2	42630.8	38951.2	22929
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	QWLLQTHWTLDK	QWLLQTHWTLDK	3	QWLLQTHWTLDK3	95828.6	118329	102776
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	QWLNQGDGIQGFR	QWLNQGDGIQGFR	2	QWLNQGDGIQGFR2	19151.5	18981.9	16256.3
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	QWLNQGDGIQGFR	QWLNQGDGIQGFR	3	QWLNQGDGIQGFR3	46343.9	37100.9	37017.5
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	QWLNSGHISDVR	QWLNSGHISDVR	2	QWLNSGHISDVR2	5741.07	1863.52	
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	QWLNSGHISDVR	QWLNSGHISDVR	3	QWLNSGHISDVR3	112548	94373.9	118796
P10536	A0A8I6A3I5;Q6NYB7;P10536	RAB1B_RAT	Rab1b	Ras-related protein Rab-1B	0	QWLQEIDR	QWLQEIDR	2	QWLQEIDR2	513092	475789	527698
P10536	Q6NYB7;P10536	RAB1B_RAT	Rab1b	Ras-related protein Rab-1B	0	QWLQEIDRYASENVNK	QWLQEIDRYASENVNK	3	QWLQEIDRYASENVNK3	37767.1	63006.1	61610.2
P00507	A0A8I6GJD2;P00507;A0A8I6GJR0	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	0	QWLQEVK	QWLQEVK	2	QWLQEVK2	152225	161294	178098
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	QWLQIDLLK	QWLQIDLLK	2	QWLQIDLLK2	2.94766e+06	3.68968e+06	2.8467e+06
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	QWNVNWDIR	QWNVNWDIR	2	QWNVNWDIR2	139074	115509	138259
A0A8I5ZYN9	A0A8I5ZYN9	A0A8I5ZYN9_RAT	Ipo11-ps1	Similar to importin 11	1	QWPELIPTLVESVK	QWPELIPTLVESVK	2	QWPELIPTLVESVK2	8273.5	20396.7	15405.7
Q5U2R3	Q5U2R3	FRMD8_RAT	Frmd8	FERM domain-containing protein 8	1	QWPELLLR	QWPELLLR	2	QWPELLLR2	25161	20458.9	20653.1
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	QWQEHVQQEEQQRPR	QWQEHVQQEEQQRPR	4	QWQEHVQQEEQQRPR4	17777.1	18550.2	14897.2
D4A8B0	D4A8B0	D4A8B0_RAT	Sec14l5	SEC14-like lipid binding 5	1	QWSETYHSASVLR	QWSETYHSASVLR	3	QWSETYHSASVLR3	6111.79		2624.45
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	QWSGTVPR	QWSGTVPR	2	QWSGTVPR2	76109.2	80220.2	82487.8
Q62636	Q62636	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	1	QWSNCAFLESSAK	QWSNC(UniMod:4)AFLESSAK	2	QWSNC(UniMod:4)AFLESSAK2	109969	101538	93204.7
Q62636	Q62636	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	1	QWSNCAFLESSAK	QWSNC(UniMod:4)AFLESSAK	3	QWSNC(UniMod:4)AFLESSAK3	63027.8	69279.5	85666.1
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	QWSVQSGPAPR	QWSVQSGPAPR	2	QWSVQSGPAPR2	46856.4	53270.6	49367.7
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	QWTFNYVLR	QWTFNYVLR	2	QWTFNYVLR2	13912.9	11623	8354.55
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	QWTVSDWGPCSGSCGQGR	QWTVSDWGPC(UniMod:4)SGSC(UniMod:4)GQGR	3	QWTVSDWGPC(UniMod:4)SGSC(UniMod:4)GQGR3	35661.7	36101.2	42975.3
G3V8Z6	G3V8Z6	G3V8Z6_RAT	Krit1	KRIT1, ankyrin repeat containing	1	QWVDDFPLHR	QWVDDFPLHR	3	QWVDDFPLHR3	11728.1	9827.29	11654
Q04631	Q04631	FNTA_RAT	Fnta	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha	1	QWVIQEFR	QWVIQEFR	2	QWVIQEFR2	12392.1	8365.53	16309.9
Q8VIL3	Q8VIL3	ZWINT_RAT	Zwint	ZW10 interactor	1	QWVLQQK	QWVLQQK	2	QWVLQQK2	67247.9	47433.2	43388.1
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	QWVNPAAGDK	QWVNPAAGDK	2	QWVNPAAGDK2	822696	670408	643947
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	QWVNPAAGDKLPK	QWVNPAAGDKLPK	2	QWVNPAAGDKLPK2	4415.37	5342.58	4597.09
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	QWVNPAAGDKLPK	QWVNPAAGDKLPK	3	QWVNPAAGDKLPK3	339007	305094	334264
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	QWVSYTIDFK	QWVSYTIDFK	2	QWVSYTIDFK2	26726.9	23694.2	25675.7
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	QWVTLVVGVNECLDRK	QWVTLVVGVNEC(UniMod:4)LDRK	3	QWVTLVVGVNEC(UniMod:4)LDRK3		9710.89	7176.83
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	QWYDFDR	QWYDFDR	2	QWYDFDR2	17422.8	11675.7	9355.36
P62243	Q6TXJ0;D3ZIE1;P62243;M0R7Q5	RS8_RAT	Rps8	Small ribosomal subunit protein eS8	0	QWYESHYALPLGR	QWYESHYALPLGR	3	QWYESHYALPLGR3	30578.7	43963.8	37072.7
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	QWYQQQLALAQEAR	QWYQQQLALAQEAR	2	QWYQQQLALAQEAR2	3133	4821.47	
P29066	P29066	ARRB1_RAT	Arrb1	Beta-arrestin-1	1	QYADICLFNTAQYK	QYADIC(UniMod:4)LFNTAQYK	2	QYADIC(UniMod:4)LFNTAQYK2	13183.7	8738.93	10956.7
P29066	P29066	ARRB1_RAT	Arrb1	Beta-arrestin-1	1	QYADICLFNTAQYK	QYADIC(UniMod:4)LFNTAQYK	3	QYADIC(UniMod:4)LFNTAQYK3	3512.12		
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	QYADICLFSTAQYK	QYADIC(UniMod:4)LFSTAQYK	2	QYADIC(UniMod:4)LFSTAQYK2	13155.7	11176.8	4539.39
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	QYAENYTR	QYAENYTR	2	QYAENYTR2	40910.5	35475.3	25295.5
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	QYAENYTRPSSR	QYAENYTRPSSR	3	QYAENYTRPSSR3	387420	441674	457890
A0A8I6A6S4	A0A8I6A6S4	A0A8I6A6S4_RAT	Stim2	Stromal interaction molecule 2	1	QYAEQELEQVR	QYAEQELEQVR	2	QYAEQELEQVR2	2467.85	2008.98	
A0A8I5ZRG3	A0A8I5ZRG3	A0A8I5ZRG3_RAT	Frmd4b	FERM domain containing 4B	1	QYAESTPLDGTDGNQLEDSLESSEQR	QYAESTPLDGTDGNQLEDSLESSEQR	3	QYAESTPLDGTDGNQLEDSLESSEQR3	3921.75	3299.93	6172.46
Q5XID0	Q5XID0	YIPF5_RAT	Yipf5	Protein YIPF5	1	QYAGCEYSQQGR	QYAGC(UniMod:4)EYSQQGR	2	QYAGC(UniMod:4)EYSQQGR2	32102.9	33343.4	28505.8
Q9R0C9	Q9R0C9	SGMR1_RAT	Sigmar1	Sigma non-opioid intracellular receptor 1	1	QYAGLDHELAFSR	QYAGLDHELAFSR	3	QYAGLDHELAFSR3	7346.33	1891.68	
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	QYAGTAALK	QYAGTAALK	2	QYAGTAALK2	74678.8	91986.4	86800.7
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	QYAGTGALK	QYAGTGALK	1	QYAGTGALK1	3063.21	2089.87	
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	QYAGTGALK	QYAGTGALK	2	QYAGTGALK2	314021	242871	324671
Q5U2Z4	Q5U2Z4	Q5U2Z4_RAT	Nfkb2	Nuclear factor kappa B subunit 2	1	QYAIVFR	QYAIVFR	2	QYAIVFR2	7271.24	7025.55	4221.88
A0A8I5ZXZ9	A0A8I5ZXZ9	A0A8I5ZXZ9_RAT	Cars2	cysteine--tRNA ligase	1	QYALATPGATGEAR	QYALATPGATGEAR	2	QYALATPGATGEAR2	5955.69	1388.34	6712.08
O35115	O35115	FHL2_RAT	Fhl2	Four and a half LIM domains protein 2	1	QYALQCVQCK	QYALQC(UniMod:4)VQC(UniMod:4)K	2	QYALQC(UniMod:4)VQC(UniMod:4)K2	3871.46	4711.05	2954.92
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	QYAMSLTNLQMVLEHFQQEEK	QYAMSLTNLQMVLEHFQQEEK	3	QYAMSLTNLQMVLEHFQQEEK3	3861.72	6004.27	2447.42
O35314	O35314	SCG1_RAT	Chgb	Secretogranin-1	1	QYAPYPTTEK	QYAPYPTTEK	2	QYAPYPTTEK2	25210	29825	34466.6
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	QYASYEFVQR	QYASYEFVQR	2	QYASYEFVQR2	57429.1	68938	66998.1
Q5XFX0	Q5XFX0	TAGL2_RAT	Tagln2	Transgelin-2	1	QYDPDLEQILIQWITTQCR	QYDPDLEQILIQWITTQC(UniMod:4)R	3	QYDPDLEQILIQWITTQC(UniMod:4)R3		11246.3	14002.8
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	QYDPHKPISYDVFK	QYDPHKPISYDVFK	4	QYDPHKPISYDVFK4	7942.07	8302.92	8882.77
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	QYDQEIENLEK	QYDQEIENLEK	2	QYDQEIENLEK2	28196.1	28753.8	32669.8
D3ZTX0	D3ZTX0	TMED7_RAT	Tmed7	Transmembrane emp24 domain-containing protein 7	1	QYDSFTFTASK	QYDSFTFTASK	2	QYDSFTFTASK2	38814.9	34509.3	40535.2
Q6TUG0	Q6TUG0	DJB11_RAT	Dnajb11	DnaJ homolog subfamily B member 11	1	QYDTYGEEGLK	QYDTYGEEGLK	2	QYDTYGEEGLK2	39257.8	61053.9	51260.5
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	QYDYDSSTIR	QYDYDSSTIR	2	QYDYDSSTIR2	16595.7	23501.8	18898.5
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	QYDYDSSTIRK	QYDYDSSTIRK	3	QYDYDSSTIRK3	6567.78	4115.36	7825.36
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	QYEDQGLGETTPLTIICQPMQPLR	QYEDQGLGETTPLTIIC(UniMod:4)QPMQPLR	3	QYEDQGLGETTPLTIIC(UniMod:4)QPMQPLR3	22631	35592.3	27418.2
A0A8I6ASC6	A0A8I6ASC6	A0A8I6ASC6_RAT	Igdcc4	Immunoglobulin superfamily, DCC subclass, member 4	1	QYELTQLVPGR	QYELTQLVPGR	2	QYELTQLVPGR2	5476.51	3735.49	2069.27
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	QYELVVHEDMDVAK	QYELVVHEDMDVAK	3	QYELVVHEDMDVAK3	6591.47	2975.96	3577.56
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	QYENWQPR	QYENWQPR	2	QYENWQPR2	6704.59	6256.15	6055.77
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	QYEPIPGSER	QYEPIPGSER	2	QYEPIPGSER2	259048	280039	295300
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	QYEQQTYQVIPEVIK	QYEQQTYQVIPEVIK	2	QYEQQTYQVIPEVIK2	109050	121245	113677
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	QYEQQTYQVIPEVIK	QYEQQTYQVIPEVIK	3	QYEQQTYQVIPEVIK3	33469.1	37571.7	52314.8
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	QYETIGLDFTIPK	QYETIGLDFTIPK	2	QYETIGLDFTIPK2	3368.18	7577.85	5605.04
P04182	P04182	OAT_RAT	Oat	Ornithine aminotransferase, mitochondrial	1	QYFDFLSAYGAVSQGHCHPK	QYFDFLSAYGAVSQGHC(UniMod:4)HPK	4	QYFDFLSAYGAVSQGHC(UniMod:4)HPK4	5187.12	7862.32	2020.54
A0A8I6AQW7	A0A8I6AQW7	A0A8I6AQW7_RAT	Msi2	Musashi RNA-binding protein 2	1	QYFEQFGK	QYFEQFGK	2	QYFEQFGK2	6736.49	5915.09	9320.56
D3ZUM4	D3ZUM4	D3ZUM4_RAT	Glb1	Beta-galactosidase	1	QYFGYVLYR	QYFGYVLYR	2	QYFGYVLYR2	21387.1	12231.8	27875.7
P54001	P54001	P4HA1_RAT	P4ha1	Prolyl 4-hydroxylase subunit alpha-1	1	QYFPNDEDQVGAAK	QYFPNDEDQVGAAK	2	QYFPNDEDQVGAAK2	22906	20396.8	17488.3
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	QYGDESTLAFQQAR	QYGDESTLAFQQAR	2	QYGDESTLAFQQAR2	12834.7	11286	11031
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	QYGGDLTNTFK	QYGGDLTNTFK	2	QYGGDLTNTFK2	133232	111236	126132
Q9JLH7	Q9JLH7	CK5P3_RAT	Cdk5rap3	CDK5 regulatory subunit-associated protein 3	1	QYGITGDNVR	QYGITGDNVR	2	QYGITGDNVR2	63209.7	52859	57098.6
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	QYGPNVPVPVLEK	QYGPNVPVPVLEK	2	QYGPNVPVPVLEK2	5992.79	9494.11	6212.73
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	QYGSEEFLAK	QYGSEEFLAK	2	QYGSEEFLAK2	99151.1	96784.9	110483
Q5I0E7	Q5I0E7;G3V6N2	TMED9_RAT	Tmed9	Transmembrane emp24 domain-containing protein 9	0	QYGSEGR	QYGSEGR	2	QYGSEGR2			12870.8
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	QYHDGLSHFVVTTVSATR	QYHDGLSHFVVTTVSATR	3	QYHDGLSHFVVTTVSATR3	4121.34	9291.13	4694.74
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	QYHDGLSHFVVTTVSATR	QYHDGLSHFVVTTVSATR	4	QYHDGLSHFVVTTVSATR4	15899.9	12809.1	12867.6
A0A8I6AIW6	A0A8I6AIW6	A0A8I6AIW6_RAT	Tmem222	Transmembrane protein 222	1	QYHGSGGVVMDVER	QYHGSGGVVMDVER	3	QYHGSGGVVMDVER3		6886.99	11028.4
D4ADQ1	Q4KLN6;D4ADQ1	D4ADQ1_RAT	Rrm2b	Ribonucleotide reductase regulatory TP53 inducible subunit M2B	0	QYIEFVADR	QYIEFVADR	2	QYIEFVADR2	26065.9	15534	17787.9
Q5XHZ9	Q5XHZ9	PCH2_RAT	Trip13	Pachytene checkpoint protein 2 homolog	1	QYIGPPSAAAIFK	QYIGPPSAAAIFK	2	QYIGPPSAAAIFK2	4942.39	7505.71	6997.64
A0A8I6ABE7	A0A8I6ABE7	A0A8I6ABE7_RAT	Xpr1	Xenotropic and polytropic retrovirus receptor 1	1	QYIQYEAFK	QYIQYEAFK	2	QYIQYEAFK2	6054.93		6284.62
D3ZMI6	D3ZMI6	D3ZMI6_RAT	Olfm4	Olfactomedin 4	1	QYKPSVSNAFIVCGVLYATR	QYKPSVSNAFIVC(UniMod:4)GVLYATR	3	QYKPSVSNAFIVC(UniMod:4)GVLYATR3	14937.8	22495.4	10764.7
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	QYLAVVFK	QYLAVVFK	2	QYLAVVFK2	8079.35	6207.45	4033.74
Q7TSU1	D4A631;Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	0	QYLCVALSK	QYLC(UniMod:4)VALSK	2	QYLC(UniMod:4)VALSK2	15625.5	24792.4	12711.8
Q4V884	Q4V884	Q4V884_RAT	Cdc16	CDC16 cell division cycle 16 homolog (S. cerevisiae)	1	QYLDQQQYQSALFWADK	QYLDQQQYQSALFWADK	3	QYLDQQQYQSALFWADK3		2764.17	2765.12
Q9ERE6	Q9ERE6	MPRIP_RAT	Mprip	Myosin phosphatase Rho-interacting protein	1	QYLEELQSVQR	QYLEELQSVQR	2	QYLEELQSVQR2	7894.61	3784	5380.92
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	QYLEHGLETTPTAPWR	QYLEHGLETTPTAPWR	3	QYLEHGLETTPTAPWR3		10783.4	
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	QYLELECR	QYLELEC(UniMod:4)R	2	QYLELEC(UniMod:4)R2	23053.4	17073.3	17412.9
D4A0T9	D4A0T9	D4A0T9_RAT	Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	1	QYLEPTGTIDMR	QYLEPTGTIDMR	2	QYLEPTGTIDMR2	5080.38	11526.3	7889.25
Q09326	Q09326	MGAT2_RAT	Mgat2	Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	1	QYLFPETLVIGEK	QYLFPETLVIGEK	2	QYLFPETLVIGEK2	20324.8	30414	31902.6
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	QYLFSLYECR	QYLFSLYEC(UniMod:4)R	2	QYLFSLYEC(UniMod:4)R2	35401.9	42641.8	40199.4
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	QYLFVSNK	QYLFVSNK	2	QYLFVSNK2	20616.6	20577.2	17700.9
P08650	P08650	CO5_RAT	C5	Complement C5	1	QYLIMGK	QYLIMGK	1	QYLIMGK1	10283.9	2934.41	5424.15
P08650	P08650	CO5_RAT	C5	Complement C5	1	QYLIMGK	QYLIMGK	2	QYLIMGK2	192627	144976	154348
A0A0G2K059	A0A0G2K059	A0A0G2K059_RAT	Mcu	Calcium uniporter protein	1	QYLLFFHK	QYLLFFHK	2	QYLLFFHK2		16484.6	
P01026	P01026	CO3_RAT	C3	Complement C3	1	QYLMWGLSSDLWGEKPNTSYIIGK	QYLMWGLSSDLWGEKPNTSYIIGK	3	QYLMWGLSSDLWGEKPNTSYIIGK3	861897	513578	540416
P01026	P01026	CO3_RAT	C3	Complement C3	1	QYLMWGLSSDLWGEKPNTSYIIGK	QYLMWGLSSDLWGEKPNTSYIIGK	4	QYLMWGLSSDLWGEKPNTSYIIGK4	20739.5	18537.8	2779
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	QYLPAIK	QYLPAIK	1	QYLPAIK1	665555	561926	552360
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	QYLPAIK	QYLPAIK	2	QYLPAIK2	3.5176e+07	3.20968e+07	3.38002e+07
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	QYLPAIKMSPVPDLVPGSFK	QYLPAIKMSPVPDLVPGSFK	3	QYLPAIKMSPVPDLVPGSFK3	7931.82	10787	7173.62
Q5M7T1	Q5M7T1	CIAO1_RAT	Ciao1	Probable cytosolic iron-sulfur protein assembly protein CIAO1	1	QYLPGNEQGVACSGSDPSWK	QYLPGNEQGVAC(UniMod:4)SGSDPSWK	3	QYLPGNEQGVAC(UniMod:4)SGSDPSWK3	11413.2	17106.6	11830.1
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	QYLPNVKPDSSFK	QYLPNVKPDSSFK	2	QYLPNVKPDSSFK2	2527.01	7322.09	5436.41
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	QYLPNVKPDSSFK	QYLPNVKPDSSFK	3	QYLPNVKPDSSFK3	75627.5	106262	90595.4
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	QYLPQEVLQIYLK	QYLPQEVLQIYLK	2	QYLPQEVLQIYLK2	6578.69	11443	5147.54
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	QYLPTNPEILVPQISTK	QYLPTNPEILVPQISTK	2	QYLPTNPEILVPQISTK2	1653.38	3946.47	
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	QYLQASTSLHYTK	QYLQASTSLHYTK	2	QYLQASTSLHYTK2	4983.03	6948.84	9043.7
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	QYLQASTSLHYTK	QYLQASTSLHYTK	3	QYLQASTSLHYTK3	26709.5	32325.6	34149.5
P70483	P70483	STRN_RAT	Strn	Striatin	1	QYLQEVGYTDTILDVK	QYLQEVGYTDTILDVK	2	QYLQEVGYTDTILDVK2	25393.6	20569.2	29866.4
P70483	P70483	STRN_RAT	Strn	Striatin	1	QYLQEVGYTDTILDVK	QYLQEVGYTDTILDVK	3	QYLQEVGYTDTILDVK3	7579.77	6121.27	8623.86
P58405	P58405	STRN3_RAT	Strn3	Striatin-3	1	QYLQEVGYTDTILDVR	QYLQEVGYTDTILDVR	2	QYLQEVGYTDTILDVR2	3487.8	6305.62	
Q62796	Q62796	RBP1_RAT	Ralbp1	RalA-binding protein 1	1	QYLRDLPENLLTK	QYLRDLPENLLTK	2	QYLRDLPENLLTK2	9706.41		4017.91
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	QYLVFHDGDSVVFAGPAGNSVETR	QYLVFHDGDSVVFAGPAGNSVETR	3	QYLVFHDGDSVVFAGPAGNSVETR3	68996.4	63478	62808.4
Q5M887	Q5M887	TPC13_RAT	Trappc13	Trafficking protein particle complex subunit 13	1	QYLYCLKPK	QYLYC(UniMod:4)LKPK	3	QYLYC(UniMod:4)LKPK3	10291.7	7565.59	14990.6
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	QYMEEENYDK	QYMEEENYDK	2	QYMEEENYDK2	25170.9	22229	34251.3
Q2LAP6	Q2LAP6;A0A8I5ZLJ9	TES_RAT	Tes	Testin	0	QYMQMLPK	QYMQMLPK	2	QYMQMLPK2	50915.3	46501.6	54236.5
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	QYNGHVLPMPR	QYNGHVLPMPR	3	QYNGHVLPMPR3	14667.4	17845.1	13101.7
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	QYNMLNADTTR	QYNMLNADTTR	2	QYNMLNADTTR2	22635.4	27330.9	23801.6
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	QYNVDYK	QYNVDYK	1	QYNVDYK1	1457.96	2554.93	3347.98
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	QYNVDYK	QYNVDYK	2	QYNVDYK2	44548.7	47902	58058.1
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	QYNVGPMASK	QYNVGPMASK	2	QYNVGPMASK2	5.06052e+07	5.41455e+07	5.16665e+07
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	QYNVGPMASKYPLR	QYNVGPMASKYPLR	2	QYNVGPMASKYPLR2	7018.93	7736.84	
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	QYNVGPMASKYPLR	QYNVGPMASKYPLR	3	QYNVGPMASKYPLR3	184378	221518	246241
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	QYPGSWAEGTLQLR	QYPGSWAEGTLQLR	2	QYPGSWAEGTLQLR2	282246	254985	301500
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	QYPGSWAEGTLQLR	QYPGSWAEGTLQLR	3	QYPGSWAEGTLQLR3	27050.4	40655.4	31263.5
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	QYPISLVLAPTR	QYPISLVLAPTR	2	QYPISLVLAPTR2	60210.5	65966.7	73158.7
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	QYPLVTPNEER	QYPLVTPNEER	2	QYPLVTPNEER2	194653	202634	215281
D3ZTC4	D3ZTC4	D3ZTC4_RAT	Ccdc88b	Coiled-coil domain containing 88B	1	QYPVDQATEVR	QYPVDQATEVR	2	QYPVDQATEVR2	4977.51		
Q9WVC0	Q9WVC0;A0A8I6ARI4	SEPT7_RAT	Septin7	Septin-7	0	QYPWGVAEVENGEHCDFTILR	QYPWGVAEVENGEHC(UniMod:4)DFTILR	3	QYPWGVAEVENGEHC(UniMod:4)DFTILR3	26375.8	31518.8	33182.4
B3GNI6	B0BNF1;B3GNI6	SEP11_RAT	Septin11	Septin-11	0	QYPWGVVQVENENHCDFVK	QYPWGVVQVENENHC(UniMod:4)DFVK	3	QYPWGVVQVENENHC(UniMod:4)DFVK3	99542.8	102871	102142
Q66HA5	Q66HA5;Q5FVK6	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	0	QYQDAIR	QYQDAIR	2	QYQDAIR2	82283	84295.6	90317.2
F1LN92	A0A8I5ZQ14;F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	0	QYQDLGAK	QYQDLGAK	2	QYQDLGAK2	14166.2	9919.15	7643.47
Q6TA25	Q6TA25	FGOP2_RAT	Fgfr1op2	FGFR1 oncogene partner 2 homolog	1	QYQEEIQELNEVAR	QYQEEIQELNEVAR	2	QYQEEIQELNEVAR2	25427.2	22460.3	21345
Q6TA25	Q6TA25	FGOP2_RAT	Fgfr1op2	FGFR1 oncogene partner 2 homolog	1	QYQEEIQELNEVAR	QYQEEIQELNEVAR	3	QYQEEIQELNEVAR3	16883.7	16415.1	13318.8
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	QYQFASGAFLHIK	QYQFASGAFLHIK	2	QYQFASGAFLHIK2		2014.96	
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	QYQFASGAFLHIK	QYQFASGAFLHIK	3	QYQFASGAFLHIK3	5272.14	4053.55	6247.49
F7FNG5	D3ZK73;F7FNG5	F7FNG5_RAT	Cul4a	Cullin 4A	0	QYQIDAAIVR	QYQIDAAIVR	2	QYQIDAAIVR2	3466.1	3213.32	4800.99
A0A8I6A6G8	A0A8I6A6G8	A0A8I6A6G8_RAT	Hm13	Histocompatibility minor 13	1	QYQLLFTQGSGENK	QYQLLFTQGSGENK	2	QYQLLFTQGSGENK2	11137.5	14488.3	12985.8
A0A8I6AAD8	A0A8I6AAD8	A0A8I6AAD8_RAT	Snx4	Sorting nexin 4	1	QYSDELQSVISHLLR	QYSDELQSVISHLLR	3	QYSDELQSVISHLLR3	8071.19	6380.97	4976.01
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	QYSLTVQATDR	QYSLTVQATDR	2	QYSLTVQATDR2	1535.75	3387.28	503.44
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	QYSVAFCNHVR	QYSVAFC(UniMod:4)NHVR	3	QYSVAFC(UniMod:4)NHVR3	24697.6	20599.2	11698.2
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	QYTAAVGR	QYTAAVGR	2	QYTAAVGR2	2.12458e+06	2.30398e+06	2.37847e+06
D3Z9C0	D3Z9C0	D3Z9C0_RAT	Mios	Meiosis regulator for oocyte development	1	QYTEEMDQK	QYTEEMDQK	2	QYTEEMDQK2	3093.82		
Q4V7C7	Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	1	QYTGVNAISK	QYTGVNAISK	2	QYTGVNAISK2	412496	388331	380333
Q4V7C7	Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	1	QYTGVNAISKK	QYTGVNAISKK	2	QYTGVNAISKK2	2248.78	2387.3	2078.7
Q4V7C7	Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	1	QYTGVNAISKK	QYTGVNAISKK	3	QYTGVNAISKK3	3315.25	9293	15865.3
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	QYTMELER	QYTMELER	2	QYTMELER2	17556.1	16165.5	10348.9
Q62785	Q62785	HAP28_RAT	Pdap1	28 kDa heat- and acid-stable phosphoprotein	1	QYTSPEEIDAQLQAEK	QYTSPEEIDAQLQAEK	2	QYTSPEEIDAQLQAEK2	71794.8	111143	77619.6
P51111	P51111	HD_RAT	Htt	Huntingtin	1	QYTTTTSVQLQK	QYTTTTSVQLQK	2	QYTTTTSVQLQK2	7895.62	5034.19	4173.94
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	QYVAHILTLK	QYVAHILTLK	3	QYVAHILTLK3	8678.24	13940.5	15168.2
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	QYVDGDQCESNPCLNGGICK	QYVDGDQC(UniMod:4)ESNPC(UniMod:4)LNGGIC(UniMod:4)K	3	QYVDGDQC(UniMod:4)ESNPC(UniMod:4)LNGGIC(UniMod:4)K3	1.60487e+06	1.47364e+06	1.53762e+06
Q497C3	Q497C3	MTL26_RAT	Mettl26	Methyltransferase-like 26	1	QYVDPAQR	QYVDPAQR	2	QYVDPAQR2	10143	17986.7	6736.3
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	QYVETHWCAQSEK	QYVETHWC(UniMod:4)AQSEK	2	QYVETHWC(UniMod:4)AQSEK2			1674.68
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	QYVETHWCAQSEK	QYVETHWC(UniMod:4)AQSEK	3	QYVETHWC(UniMod:4)AQSEK3	24030	23599.5	19029.2
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	QYVEVLSR	QYVEVLSR	2	QYVEVLSR2		2861.71	
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	QYVEYQDQILHAVQFIR	QYVEYQDQILHAVQFIR	3	QYVEYQDQILHAVQFIR3	6180.72	6837.76	
Q9JJM9	Q9JJM9	SEPT5_RAT	Septin5	Septin-5	1	QYVGFATLPNQVHR	QYVGFATLPNQVHR	2	QYVGFATLPNQVHR2	7159.17	6758.2	7004.37
Q9JJM9	Q9JJM9	SEPT5_RAT	Septin5	Septin-5	1	QYVGFATLPNQVHR	QYVGFATLPNQVHR	3	QYVGFATLPNQVHR3	102213	78803.1	102265
Q5PQN6	Q5PQN6	SPE39_RAT	Vipas39	Spermatogenesis-defective protein 39 homolog	1	QYVLTALAAR	QYVLTALAAR	2	QYVLTALAAR2	15251.1	16937.2	11428.3
Q6AY97	Q6AY97	CCD91_RAT	Ccdc91	Coiled-coil domain-containing protein 91	1	QYVSAIEK	QYVSAIEK	2	QYVSAIEK2	15207.9	14275	13061.5
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	QYVVVSSK	QYVVVSSK	2	QYVVVSSK2	14781.4	19704.7	12599.8
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	QYVYGVLFSLAESR	QYVYGVLFSLAESR	2	QYVYGVLFSLAESR2	7503.09	6071.61	7729.46
P12007	P12007	IVD_RAT	Ivd	Isovaleryl-CoA dehydrogenase, mitochondrial	1	QYVYNVAR	QYVYNVAR	2	QYVYNVAR2	16720.3	24945.7	16273.5
F7EUU4	F7EUU4	F7EUU4_RAT	Cops5	COP9 signalosome subunit 5	1	QYYALEVSYFK	QYYALEVSYFK	2	QYYALEVSYFK2	26708.1	25327.6	22614.4
Q5PQL5	Q5PQL5	PTSS1_RAT	Ptdss1	Phosphatidylserine synthase 1	1	QYYAYLTDTQCK	QYYAYLTDTQC(UniMod:4)K	2	QYYAYLTDTQC(UniMod:4)K2	6744.45	9215.55	10028.7
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	QYYDGSEIVVAGR	QYYDGSEIVVAGR	2	QYYDGSEIVVAGR2	551840	679757	358834
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	QYYDGSEIVVAGR	QYYDGSEIVVAGR	3	QYYDGSEIVVAGR3	2.25564e+06	2.80718e+06	2.93849e+06
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	QYYDGSEIVVAGRIADHKLSTFK	QYYDGSEIVVAGRIADHKLSTFK	4	QYYDGSEIVVAGRIADHKLSTFK4	8572.18	4525.02	5711.86
P31211	P31211	CBG_RAT	Serpina6	Corticosteroid-binding globulin	1	QYYESEALAIDFEDWTK	QYYESEALAIDFEDWTK	3	QYYESEALAIDFEDWTK3	15574	5968.61	8730.74
P04166	P04166	CYB5B_RAT	Cyb5b	Cytochrome b5 type B	1	QYYIGDVHPNDLKPK	QYYIGDVHPNDLKPK	3	QYYIGDVHPNDLKPK3	55945.6	37818.3	54487.2
P04166	P04166	CYB5B_RAT	Cyb5b	Cytochrome b5 type B	1	QYYIGDVHPNDLKPK	QYYIGDVHPNDLKPK	4	QYYIGDVHPNDLKPK4	132990	151765	164298
Q5PPK9	Q5PPK9	EIPR1_RAT	Eipr1	EARP and GARP complex-interacting protein 1	1	QYYLASCGDDCK	QYYLASC(UniMod:4)GDDC(UniMod:4)K	2	QYYLASC(UniMod:4)GDDC(UniMod:4)K2	16690.1	13338.6	17234.7
F7F5P9	F7F5P9	F7F5P9_RAT	G3bp2	G3BP stress granule assembly factor 2	1	QYYTLLNK	QYYTLLNK	2	QYYTLLNK2	44262.9	52717.1	38443.2
D3ZYS7	D3ZYS7	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	1	QYYTLLNQAPDMLHR	QYYTLLNQAPDMLHR	2	QYYTLLNQAPDMLHR2	3427.78	3763.53	3020.43
D3ZYS7	D3ZYS7	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	1	QYYTLLNQAPDMLHR	QYYTLLNQAPDMLHR	3	QYYTLLNQAPDMLHR3	142745	118296	137778
A0A8I6GJC5	A0A8I6GJC5	A0A8I6GJC5_RAT	Reps1	RALBP1 associated Eps domain containing 1	1	QYYVNQFK	QYYVNQFK	2	QYYVNQFK2	13663.6	13695.1	10485.4
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	RAAAEVNQEYGLDPK	RAAAEVNQEYGLDPK	3	RAAAEVNQEYGLDPK3	12791.6	10343.1	14376.8
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	RAAEGGALAGEVR	RAAEGGALAGEVR	3	RAAEGGALAGEVR3	176476	200282	126744
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	RAAEMMASLLK	RAAEMMASLLK	2	RAAEMMASLLK2	15143	6690.44	6900.19
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	RAAEMMASLLK	RAAEMMASLLK	3	RAAEMMASLLK3	105073	104130	101992
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	RAAEVWMDEFK	RAAEVWMDEFK	3	RAAEVWMDEFK3	50493.2	61958.6	60359.6
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	RAAGVVLEMIR	RAAGVVLEMIR	3	RAAGVVLEMIR3	30702.4	40348	54661.7
A0A8I5ZP83	D4A9Z8;A0A8I5ZP83;Q569C1	A0A8I5ZP83_RAT	Chmp4b	Charged multivesicular body protein 4B	0	RAALQALK	RAALQALK	2	RAALQALK2	58755.7	58432.7	52086.4
D4A1A5	D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	RAALSEMVEYITHNR	RAALSEMVEYITHNR	3	RAALSEMVEYITHNR3	32492.8	41077.3	28891.3
D4A1A5	D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	RAALSEMVEYITHNR	RAALSEMVEYITHNR	4	RAALSEMVEYITHNR4	3166.38	3306.58	3519.1
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	RAAQFLR	RAAQFLR	2	RAAQFLR2	15352.3	20726.7	15983.3
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	RAAQLCGAGMAAVVEK	RAAQLC(UniMod:4)GAGMAAVVEK	3	RAAQLC(UniMod:4)GAGMAAVVEK3	29605.7	36293.7	36805.2
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	RAASAAGASPAASPAAPESGTIPK	RAASAAGASPAASPAAPESGTIPK	3	RAASAAGASPAASPAAPESGTIPK3	11448.3	8292.85	10812.8
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	RAASLNYLNQPNAAPLQTSR	RAASLNYLNQPNAAPLQTSR	3	RAASLNYLNQPNAAPLQTSR3	3371.3		
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	RAAVESLGFILFR	RAAVESLGFILFR	3	RAAVESLGFILFR3			2515.19
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	RAAVLFQQVK	RAAVLFQQVK	3	RAAVLFQQVK3	8736.46	8011.2	12844
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	RACTLDCPFGFLTDVHNCELCQCRPR	RAC(UniMod:4)TLDC(UniMod:4)PFGFLTDVHNC(UniMod:4)ELC(UniMod:4)QC(UniMod:4)RPR	4	RAC(UniMod:4)TLDC(UniMod:4)PFGFLTDVHNC(UniMod:4)ELC(UniMod:4)QC(UniMod:4)RPR4	11021.9	27899	7415.06
Q5RK09	Q5RK09	EIF3G_RAT	Eif3g	Eukaryotic translation initiation factor 3 subunit G	1	RADDNATIR	RADDNATIR	2	RADDNATIR2			2385.42
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	RADEARPNTIDFGK	RADEARPNTIDFGK	3	RADEARPNTIDFGK3	8393.53	7789.27	3675.36
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	RADILAFPSSGFTDLAEIVSR	RADILAFPSSGFTDLAEIVSR	3	RADILAFPSSGFTDLAEIVSR3	12891.9	15650.3	14206.5
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	RADLAEPKPCQR	RADLAEPKPC(UniMod:4)QR	3	RADLAEPKPC(UniMod:4)QR3	173412	138676	169254
Q4FZY0	Q4FZY0	EFHD2_RAT	Efhd2	EF-hand domain-containing protein D2	1	RADLNQGIGEPQSPSR	RADLNQGIGEPQSPSR	3	RADLNQGIGEPQSPSR3	67800.9	59441	69593.4
Q4FZY0	Q4FZY0	EFHD2_RAT	Efhd2	EF-hand domain-containing protein D2	1	RADLNQGIGEPQSPSRR	RADLNQGIGEPQSPSRR	4	RADLNQGIGEPQSPSRR4	14780.2	8586	15791.8
Q497B0	Q497B0	NIT2_RAT	Nit2	Omega-amidase NIT2	1	RADLYSVESK	RADLYSVESK	2	RADLYSVESK2	11401.6	11360.4	4235.99
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	RADTVGLACEAINR	RADTVGLAC(UniMod:4)EAINR	3	RADTVGLAC(UniMod:4)EAINR3	24153.5	24024	22586.5
O35777	O35777	MAGT1_RAT	Magt1	Magnesium transporter protein 1	1	RADTYELQVR	RADTYELQVR	2	RADTYELQVR2	2134.64	2151.62	869.028
O35777	O35777	MAGT1_RAT	Magt1	Magnesium transporter protein 1	1	RADTYELQVR	RADTYELQVR	3	RADTYELQVR3	105411	121437	114771
P14423	P14423	PA2GA_RAT	Pla2g2a	Phospholipase A2, membrane associated	1	RADVSYGFYGCHCGVGGR	RADVSYGFYGC(UniMod:4)HC(UniMod:4)GVGGR	3	RADVSYGFYGC(UniMod:4)HC(UniMod:4)GVGGR3	149765	133864	99295.1
P14423	P14423	PA2GA_RAT	Pla2g2a	Phospholipase A2, membrane associated	1	RADVSYGFYGCHCGVGGR	RADVSYGFYGC(UniMod:4)HC(UniMod:4)GVGGR	4	RADVSYGFYGC(UniMod:4)HC(UniMod:4)GVGGR4	316688	383396	546424
Q07936	Q07936	ANXA2_RAT	Anxa2	Annexin A2	1	RAEDGSVIDYELIDQDAR	RAEDGSVIDYELIDQDAR	3	RAEDGSVIDYELIDQDAR3	17068.1		6557.51
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	RAEDQELESLSAIEAELEK	RAEDQELESLSAIEAELEK	3	RAEDQELESLSAIEAELEK3	875664	1.03447e+06	933808
B2RYK9	B2RYK9	B2RYK9_RAT	Dmkn	Dermokine	1	RAEDVIR	RAEDVIR	2	RAEDVIR2	4043.25	3606.82	
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	RAEDYPIDLYYLMDLSYSMK	RAEDYPIDLYYLMDLSYSMK	3	RAEDYPIDLYYLMDLSYSMK3	41604.8	32649.5	36346.3
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	RAEEELLLHDTR	RAEEELLLHDTR	3	RAEEELLLHDTR3	100932	99468.2	120735
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	RAEEQMLK	RAEEQMLK	2	RAEEQMLK2	59188.1	60655.6	64712
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	RAEFTVETR	RAEFTVETR	2	RAEFTVETR2	679117	735039	731988
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	RAEHEQEYIR	RAEHEQEYIR	3	RAEHEQEYIR3	5430.94	4034.77	2706.58
P0C2X9	P0C2X9	AL4A1_RAT	Aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1	RAEILAK	RAEILAK	2	RAEILAK2	53057.6	60046.3	63439.4
P10716	P10716	CLC4F_RAT	Clec4f	C-type lectin domain family 4 member F	1	RAEMQEAIQSLR	RAEMQEAIQSLR	3	RAEMQEAIQSLR3	11093	8071.6	7072.45
A0A8I5ZM01	A0A8I5ZM01	A0A8I5ZM01_RAT	Evi5	Ecotropic viral integration site 5	1	RAEQEVTSLQEK	RAEQEVTSLQEK	3	RAEQEVTSLQEK3	5983.56	6497.79	12164.9
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	RAEQLLQDAQR	RAEQLLQDAQR	3	RAEQLLQDAQR3	12894.6	13616.7	12150.5
Q7TT49	Q7TT49;O54874;D3Z837	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	0	RAETACFREER	RAETAC(UniMod:4)FREER	3	RAETAC(UniMod:4)FREER3	2512.13	5043.63	
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	RAEVELEYSR	RAEVELEYSR	3	RAEVELEYSR3	7024.1	7468.41	5193.59
P20788	P20788	UCRI_RAT	Uqcrfs1	Cytochrome b-c1 complex subunit Rieske, mitochondrial	1	RAEVLDSTK	RAEVLDSTK	2	RAEVLDSTK2	49100.3	30422.8	33901.3
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	RAEVSNAIDQYVTGTIGEGEDLVK	RAEVSNAIDQYVTGTIGEGEDLVK	3	RAEVSNAIDQYVTGTIGEGEDLVK3	21192.4	14544.6	14210.8
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	RAFDSAVAK	RAFDSAVAK	2	RAFDSAVAK2	57786.8	57664.4	66114.6
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	RAFEAIESAQSAR	RAFEAIESAQSAR	3	RAFEAIESAQSAR3	13147.5	11421.7	9981.92
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	RAFHGWNEFDISEDEPLWK	RAFHGWNEFDISEDEPLWK	4	RAFHGWNEFDISEDEPLWK4	2948.11		960.241
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	RAFLSDMIK	RAFLSDMIK	2	RAFLSDMIK2	5894.83		
A0A8I6ARU6	A0A8I6ARU6	A0A8I6ARU6_RAT	Galk1	Galactokinase 1	1	RAFMEEFGAEPELAVSAPGR	RAFMEEFGAEPELAVSAPGR	3	RAFMEEFGAEPELAVSAPGR3	8515.97	8110.12	7887.17
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	RAFQELVLEPAQR	RAFQELVLEPAQR	2	RAFQELVLEPAQR2	3196.16	8255.39	
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	RAFQELVLEPAQR	RAFQELVLEPAQR	3	RAFQELVLEPAQR3	192592	236306	227484
Q499N6	Q499N6	UBXN1_RAT	Ubxn1	UBX domain-containing protein 1	1	RAFSEADMERPLQELGLVPSAVLIVAK	RAFSEADMERPLQELGLVPSAVLIVAK	4	RAFSEADMERPLQELGLVPSAVLIVAK4	6594.17	5907.43	4250.15
Q5XIF6	A0A8I6AF82;P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9;Q6AY56	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	RAFVHWYVGEGMEEGEFSEAR	RAFVHWYVGEGMEEGEFSEAR	3	RAFVHWYVGEGMEEGEFSEAR3	680589	638099	571038
Q5XIF6	A0A8I6AF82;P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9;Q6AY56	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	RAFVHWYVGEGMEEGEFSEAR	RAFVHWYVGEGMEEGEFSEAR	4	RAFVHWYVGEGMEEGEFSEAR4	1.78174e+06	2.10952e+06	1.97061e+06
Q6AY56	Q68FR8;Q6AY56	TBA8_RAT	Tuba8	Tubulin alpha-8 chain	0	RAFVHWYVGEGMEEGEFSEAREDLAALEK	RAFVHWYVGEGMEEGEFSEAREDLAALEK	4	RAFVHWYVGEGMEEGEFSEAREDLAALEK4	90417.5	89906.6	84563.9
Q5XIF6	P68370;Q5XIF6;Q6AYZ1;Q6P9V9	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	RAFVHWYVGEGMEEGEFSEAREDMAALEK	RAFVHWYVGEGMEEGEFSEAREDMAALEK	4	RAFVHWYVGEGMEEGEFSEAREDMAALEK4	2.07448e+06	1.93648e+06	1.9639e+06
P06214	P06214	HEM2_RAT	Alad	Delta-aminolevulinic acid dehydratase	1	RAGADIIITYFAPQLLK	RAGADIIITYFAPQLLK	3	RAGADIIITYFAPQLLK3	2647.19	3202.3	3349.83
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	RAGAFDAVPCYHWSAGGK	RAGAFDAVPC(UniMod:4)YHWSAGGK	4	RAGAFDAVPC(UniMod:4)YHWSAGGK4	4839.02	9714.62	12992.7
P62271	D3ZM33;P62271;A0A0G2KA79;D3ZAU6	RS18_RAT	Rps18	Small ribosomal subunit protein uS13	0	RAGELTEDEVER	RAGELTEDEVER	3	RAGELTEDEVER3	31989.1	36434.6	32300
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	RAGFMLQEADK	RAGFMLQEADK	3	RAGFMLQEADK3	5079.36	5155.17	
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	RAGFSHMLIQR	RAGFSHMLIQR	3	RAGFSHMLIQR3	10557.3	11662.5	17169.8
B2RYK9	B2RYK9	B2RYK9_RAT	Dmkn	Dermokine	1	RAGGADQFSQPEAAR	RAGGADQFSQPEAAR	3	RAGGADQFSQPEAAR3	3667.53	2944.44	3139.52
Q62622	Q62622	4EBP1_RAT	Eif4ebp1	Eukaryotic translation initiation factor 4E-binding protein 1	1	RAGGEESQFEMDI	RAGGEESQFEMDI	2	RAGGEESQFEMDI2	8747.1	3662.3	9161.93
Q498T9	Q498T9	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	1	RAGLVVEDALFETLPSDVR	RAGLVVEDALFETLPSDVR	3	RAGLVVEDALFETLPSDVR3	6826.12		3141.07
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	RAGNSLAASTAEETAGSAQSR	RAGNSLAASTAEETAGSAQSR	3	RAGNSLAASTAEETAGSAQSR3	3755.74	5085.03	1948.63
A0A8I5ZYB9	A0A8I5ZYB9	A0A8I5ZYB9_RAT	Lrrc32	Leucine rich repeat containing 32	1	RAGSLPCLVLLDLSHNVLEALELGTK	RAGSLPC(UniMod:4)LVLLDLSHNVLEALELGTK	4	RAGSLPC(UniMod:4)LVLLDLSHNVLEALELGTK4		6598	
Q924S5	A0A8I6B3S7;Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	0	RAGVTCIILPAENR	RAGVTC(UniMod:4)IILPAENR	3	RAGVTC(UniMod:4)IILPAENR3	23112.1	10919.7	21306.9
Q924S5	A0A8I6B3S7;Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	0	RAGVTCIILPAENRK	RAGVTC(UniMod:4)IILPAENRK	3	RAGVTC(UniMod:4)IILPAENRK3	7497.09	10188.4	6091.3
Q924S5	A0A8I6B3S7;Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	0	RAGVTCIILPAENRK	RAGVTC(UniMod:4)IILPAENRK	4	RAGVTC(UniMod:4)IILPAENRK4	6126.35	9737.87	8359.08
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	RAHELDAQAIAR	RAHELDAQAIAR	3	RAHELDAQAIAR3	2129.62	2560.13	4831.87
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	RAHLHPDHLVEVR	RAHLHPDHLVEVR	4	RAHLHPDHLVEVR4	8003.71	11139.8	7333.98
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	RAIADMLR	RAIADMLR	2	RAIADMLR2	110071	218579	206042
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	RAIELATTLDGSLTNR	RAIELATTLDGSLTNR	3	RAIELATTLDGSLTNR3	6443.95	4631.36	
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	RAIETTDVTR	RAIETTDVTR	3	RAIETTDVTR3	2655.63	4503.78	5198.54
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	RAIIEDLEPR	RAIIEDLEPR	3	RAIIEDLEPR3	9301.36	9039.76	10607.2
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	RAILTMDEQEDLPK	RAILTMDEQEDLPK	3	RAILTMDEQEDLPK3	9924.31	6021.5	16157.6
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	RAIPNQGEILVIR	RAIPNQGEILVIR	3	RAIPNQGEILVIR3	7403.44	11481.4	
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	RAIVEDHSLVAEEK	RAIVEDHSLVAEEK	3	RAIVEDHSLVAEEK3	10137.3	15041.5	8376.04
P28075	P28075	PSB5_RAT	Psmb5	Proteasome subunit beta type-5	1	RAIYQATYR	RAIYQATYR	2	RAIYQATYR2	16449.6	15593.9	26535.4
P28075	P28075	PSB5_RAT	Psmb5	Proteasome subunit beta type-5	1	RAIYQATYR	RAIYQATYR	3	RAIYQATYR3	109873	165799	180784
B2RYW9	B2RYW9	FAHD2_RAT	Fahd2	Fumarylacetoacetate hydrolase domain-containing protein 2	1	RALAAQLPLIPR	RALAAQLPLIPR	3	RALAAQLPLIPR3	17350.8	16701	23831.6
P05065	Q6AY07;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	RALANSLACQGK	RALANSLAC(UniMod:4)QGK	2	RALANSLAC(UniMod:4)QGK2	7574.52	4926.98	6956.69
P05065	Q6AY07;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	RALANSLACQGK	RALANSLAC(UniMod:4)QGK	3	RALANSLAC(UniMod:4)QGK3	202146	206073	223311
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	RALASIDSK	RALASIDSK	2	RALASIDSK2	302702	262201	256038
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	RALDEGLTAGHPQGTAVPEKPSR	RALDEGLTAGHPQGTAVPEKPSR	4	RALDEGLTAGHPQGTAVPEKPSR4	32183.2	29593.4	38651.8
B2RYS2	F7FFF0;B2RYS2	B2RYS2_RAT	Uqcrb	Cytochrome b-c1 complex subunit 7	0	RALDLSMR	RALDLSMR	2	RALDLSMR2	17950.6	16880.7	14733.2
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	RALDLVAAK	RALDLVAAK	2	RALDLVAAK2	10106.6		3402.3
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	RALDQYLMEFNACR	RALDQYLMEFNAC(UniMod:4)R	3	RALDQYLMEFNAC(UniMod:4)R3	8792.8	18003.2	15292.9
O35763	O35763	MOES_RAT	Msn	Moesin	1	RALELEQER	RALELEQER	3	RALELEQER3	22259.6	16994.9	21700.5
O35763	O35763	MOES_RAT	Msn	Moesin	1	RALELEQERK	RALELEQERK	3	RALELEQERK3	12666.7	14370.1	14321.3
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	RALELGTVMTVFSAR	RALELGTVMTVFSAR	3	RALELGTVMTVFSAR3	1214.23	3552.57	2598.47
P97586	P97586	CGRE1_RAT	Cgref1	Cell growth regulator with EF hand domain protein 1	1	RALEPEQEAGHHIETK	RALEPEQEAGHHIETK	2	RALEPEQEAGHHIETK2	3669.69	1708.75	
P97586	P97586	CGRE1_RAT	Cgref1	Cell growth regulator with EF hand domain protein 1	1	RALEPEQEAGHHIETK	RALEPEQEAGHHIETK	3	RALEPEQEAGHHIETK3	99944.3	112838	94575.1
P97586	P97586	CGRE1_RAT	Cgref1	Cell growth regulator with EF hand domain protein 1	1	RALEPEQEAGHHIETK	RALEPEQEAGHHIETK	4	RALEPEQEAGHHIETK4	1.61161e+06	1.8066e+06	1.80564e+06
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	RALHEDLPSGSFIQEDMAHCSYLCEAGR	RALHEDLPSGSFIQEDMAHC(UniMod:4)SYLC(UniMod:4)EAGR	4	RALHEDLPSGSFIQEDMAHC(UniMod:4)SYLC(UniMod:4)EAGR4	27534.7	32464.2	31416.6
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	RALIAGGGAPEIELALR	RALIAGGGAPEIELALR	3	RALIAGGGAPEIELALR3	39389.3	48305.1	29624.9
Q9QZM5	Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	1	RALIESYQNLTR	RALIESYQNLTR	3	RALIESYQNLTR3	51072.9	68483.6	71573
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	RALIQCAK	RALIQC(UniMod:4)AK	2	RALIQC(UniMod:4)AK2	26912.9	20408.8	36199.9
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	RALMGSPQLVAAVVR	RALMGSPQLVAAVVR	3	RALMGSPQLVAAVVR3	3249.79	7077.51	3348.97
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	RALNFLVNEFLLK	RALNFLVNEFLLK	3	RALNFLVNEFLLK3	6520.12	5613.07	4042.39
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	RALQEFSELNER	RALQEFSELNER	3	RALQEFSELNER3	28088.7	33116.9	36000.8
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	RAMVEEEITR	RAMVEEEITR	3	RAMVEEEITR3	13303.9	13786.5	9293.89
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	RANEFLEVGK	RANEFLEVGK	2	RANEFLEVGK2	14482.5	11523.4	22978.3
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	RANEFLEVGK	RANEFLEVGK	3	RANEFLEVGK3	22326.5	16544.6	9675.03
P35446	P35446	SPON1_RAT	Spon1	Spondin-1	1	RANHWSAIIGGSHSK	RANHWSAIIGGSHSK	4	RANHWSAIIGGSHSK4	2895.18	7189.31	10609
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	RANILEDSYR	RANILEDSYR	2	RANILEDSYR2	10883.5	13495.2	9311.27
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	RANILEDSYR	RANILEDSYR	3	RANILEDSYR3	107466	128176	90327.5
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	RANILEDSYRR	RANILEDSYRR	3	RANILEDSYRR3	8342.07	14559.2	5830.82
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	RANIPLYHGFK	RANIPLYHGFK	3	RANIPLYHGFK3	41240.2	37784.4	36289.1
D3ZYT6	D3ZYT6	D3ZYT6_RAT	Treml1	Triggering receptor expressed on myeloid cells-like 1	1	RAPESGR	RAPESGR	2	RAPESGR2	4813.75	2453.61	7738.69
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	RAPFDLFENK	RAPFDLFENK	2	RAPFDLFENK2	298922	258121	297130
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	RAPFDLFENK	RAPFDLFENK	3	RAPFDLFENK3	104987	140522	123289
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	RAPFDLFENKK	RAPFDLFENKK	2	RAPFDLFENKK2		6455.72	8817.62
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	RAPFDLFENKK	RAPFDLFENKK	3	RAPFDLFENKK3	598586	712397	593982
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	RAPFDLFENR	RAPFDLFENR	2	RAPFDLFENR2	125195	123198	118266
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	RAPFDLFENR	RAPFDLFENR	3	RAPFDLFENR3	794245	912857	846972
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	RAPFDLFENRK	RAPFDLFENRK	3	RAPFDLFENRK3	276533	308749	336462
P08649	P08649	CO4_RAT	C4	Complement C4	1	RAPHIQLVAHSPWLK	RAPHIQLVAHSPWLK	2	RAPHIQLVAHSPWLK2	134383	130577	92319.3
P08649	P08649	CO4_RAT	C4	Complement C4	1	RAPHIQLVAHSPWLK	RAPHIQLVAHSPWLK	3	RAPHIQLVAHSPWLK3	2.14044e+06	2.51704e+06	2.13644e+06
P08649	P08649	CO4_RAT	C4	Complement C4	1	RAPHIQLVAHSPWLK	RAPHIQLVAHSPWLK	4	RAPHIQLVAHSPWLK4	142967	165609	1.76804e+07
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	RAPHIQLVAYSPWLK	RAPHIQLVAYSPWLK	2	RAPHIQLVAYSPWLK2	70200.5	66385.9	57413.6
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	RAPHIQLVAYSPWLK	RAPHIQLVAYSPWLK	3	RAPHIQLVAYSPWLK3	1.33389e+06	1.6532e+06	1.44986e+06
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	RAPHIQLVAYSPWLK	RAPHIQLVAYSPWLK	4	RAPHIQLVAYSPWLK4	846198	959712	780996
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	RAPHIQLVAYSPWLKNTAPK	RAPHIQLVAYSPWLKNTAPK	4	RAPHIQLVAYSPWLKNTAPK4	4318.61	3970.01	
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	RAPHLHSLYTLCR	RAPHLHSLYTLC(UniMod:4)R	4	RAPHLHSLYTLC(UniMod:4)R4	17502.2	34630.7	11923.5
Q6IE70	Q6IE70	PAN2_RAT	Pan2	PAN2-PAN3 deadenylation complex catalytic subunit Pan2	1	RAPPVDAEILR	RAPPVDAEILR	3	RAPPVDAEILR3	1931.05	3358.9	3004.14
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	RAPQMDWSK	RAPQMDWSK	2	RAPQMDWSK2	53824	66452.4	58618.8
P08025	P08025	IGF1_RAT	Igf1	Insulin-like growth factor I	1	RAPQTGIVDECCFR	RAPQTGIVDEC(UniMod:4)C(UniMod:4)FR	3	RAPQTGIVDEC(UniMod:4)C(UniMod:4)FR3	35630.9	34499.7	33597.1
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	RAPSVANVGSHCDLSLK	RAPSVANVGSHC(UniMod:4)DLSLK	2	RAPSVANVGSHC(UniMod:4)DLSLK2	1089.87	3123.43	1960.76
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	RAPSVANVGSHCDLSLK	RAPSVANVGSHC(UniMod:4)DLSLK	3	RAPSVANVGSHC(UniMod:4)DLSLK3	133787	134534	115203
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	RAPSVANVGSHCDLSLK	RAPSVANVGSHC(UniMod:4)DLSLK	4	RAPSVANVGSHC(UniMod:4)DLSLK4	60364.5	63794	61387.5
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	RAPTCSLDGALPLSAQIPALHR	RAPTC(UniMod:4)SLDGALPLSAQIPALHR	3	RAPTC(UniMod:4)SLDGALPLSAQIPALHR3	71200.6	71514.7	58031.3
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	RAPTCSLDGALPLSAQIPALHR	RAPTC(UniMod:4)SLDGALPLSAQIPALHR	4	RAPTC(UniMod:4)SLDGALPLSAQIPALHR4	164095	166173	180978
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	RAPVIDADKPVSSQLR	RAPVIDADKPVSSQLR	3	RAPVIDADKPVSSQLR3	138904	175323	126349
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	RAPVIDADKPVSSQLR	RAPVIDADKPVSSQLR	4	RAPVIDADKPVSSQLR4	162504	229144	221380
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	RAPVIWDNIHANDYDQK	RAPVIWDNIHANDYDQK	3	RAPVIWDNIHANDYDQK3	12139.4	7150.72	9940.3
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	RAPVIWDNIHANDYDQK	RAPVIWDNIHANDYDQK	4	RAPVIWDNIHANDYDQK4	12027.2	31795.6	19146.4
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	RAPVIWDNIHANDYDQKR	RAPVIWDNIHANDYDQKR	4	RAPVIWDNIHANDYDQKR4	5567.98	1130.54	
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	RAPYIAYLTR	RAPYIAYLTR	3	RAPYIAYLTR3	24244.9	34395.6	26531.5
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	RAQADLAYQLQVAK	RAQADLAYQLQVAK	3	RAQADLAYQLQVAK3	7110.44	8162.62	15948.1
P09527	P09527	RAB7A_RAT	Rab7a	Ras-related protein Rab-7a	1	RAQAWCYSK	RAQAWC(UniMod:4)YSK	2	RAQAWC(UniMod:4)YSK2	42608.6	62026	62757.4
P09527	P09527	RAB7A_RAT	Rab7a	Ras-related protein Rab-7a	1	RAQAWCYSK	RAQAWC(UniMod:4)YSK	3	RAQAWC(UniMod:4)YSK3	74845.7	94856.4	95160.1
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	RAQCETLSPDGLPEEQPQTTK	RAQC(UniMod:4)ETLSPDGLPEEQPQTTK	3	RAQC(UniMod:4)ETLSPDGLPEEQPQTTK3	6449.96	8465.08	8675.74
Q9WV63	Q9WV63;A0A8I6A456	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	0	RAQDVDATNPNYEIMCMIR	RAQDVDATNPNYEIMC(UniMod:4)MIR	3	RAQDVDATNPNYEIMC(UniMod:4)MIR3	6066.16	20863.9	15386.2
B5DFN2	D3ZWL6;B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	0	RAQGEKPLAGAK	RAQGEKPLAGAK	2	RAQGEKPLAGAK2			5242.32
B5DFN2	D3ZWL6;B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	0	RAQGEKPLAGAK	RAQGEKPLAGAK	3	RAQGEKPLAGAK3			25320.6
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	RAQLADSFHLQQFFR	RAQLADSFHLQQFFR	3	RAQLADSFHLQQFFR3	34583	39412.9	40470.3
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	RAQLADSFHLQQFFR	RAQLADSFHLQQFFR	4	RAQLADSFHLQQFFR4	39748.9	69940.9	46110.8
F1LTT7	F1LTT7	F1LTT7_RAT	Dennd4b	DENN domain containing 4B	1	RAQMPSPK	RAQMPSPK	2	RAQMPSPK2	1511.97		
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	RAQNCNILLSR	RAQNC(UniMod:4)NILLSR	3	RAQNC(UniMod:4)NILLSR3	55813.9	61229.5	51227
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	RAQSELAAHQK	RAQSELAAHQK	3	RAQSELAAHQK3			110117
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	RAQSTDSLGTSSSLQSK	RAQSTDSLGTSSSLQSK	3	RAQSTDSLGTSSSLQSK3	4379	1975.98	4610.75
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	RAQSVSLEGSAPSPSPTHTHHR	RAQSVSLEGSAPSPSPTHTHHR	4	RAQSVSLEGSAPSPSPTHTHHR4	77093.8	83413	76180.3
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	RAQTGSAGADPTTDVSGQS	RAQTGSAGADPTTDVSGQS	2	RAQTGSAGADPTTDVSGQS2	13453.4	10155.1	7682.06
Q9JMB3	Q9JMB3	Q9JMB3_RAT	Epb41l3	Erythrocyte membrane protein band 4.1-like 3	1	RASALIDRPAPYFER	RASALIDRPAPYFER	4	RASALIDRPAPYFER4	4125.55	1260.3	7817.85
D3ZUL5	D3ZUL5	D3ZUL5_RAT	Myct1	Myc target 1	1	RASAPISQWSPTR	RASAPISQWSPTR	3	RASAPISQWSPTR3	18933.6	25955.1	24708.3
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	RASDNLVK	RASDNLVK	2	RASDNLVK2	869161	933849	1.0981e+06
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	RASELAVSEVAGLLQADLQNGLNK	RASELAVSEVAGLLQADLQNGLNK	3	RASELAVSEVAGLLQADLQNGLNK3	19448.7	25456.8	10997.5
P13668	P13668	STMN1_RAT	Stmn1	Stathmin	1	RASGQAFELILSPR	RASGQAFELILSPR	3	RASGQAFELILSPR3	2926.83	3243.36	
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	RASHTAPQVLFSHR	RASHTAPQVLFSHR	3	RASHTAPQVLFSHR3	11769	9553.15	5617.99
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	RASHTAPQVLFSHR	RASHTAPQVLFSHR	4	RASHTAPQVLFSHR4	175015	169592	177960
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	RASLQASAAAPEAR	RASLQASAAAPEAR	3	RASLQASAAAPEAR3	12058.8	16616.1	8887.84
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	RASSDLSIASSEEDK	RASSDLSIASSEEDK	3	RASSDLSIASSEEDK3	16497.6	23140.8	25159
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	RASSEDMLNKPGSASSGVAR	RASSEDMLNKPGSASSGVAR	3	RASSEDMLNKPGSASSGVAR3	13855	15123.8	10705.6
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	RASSEDMLNKPGSASSGVAR	RASSEDMLNKPGSASSGVAR	4	RASSEDMLNKPGSASSGVAR4	22579	26409.8	32113
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	RASVCAEAYNPDEEEDDAESR	RASVC(UniMod:4)AEAYNPDEEEDDAESR	3	RASVC(UniMod:4)AEAYNPDEEEDDAESR3	77503.2	89040.2	75249.7
P50503	P50503;A0A8I5ZKD8	F10A1_RAT	St13	Hsc70-interacting protein	0	RASVFVK	RASVFVK	2	RASVFVK2	151915	200798	217917
D3ZF26	D3ZF26	D3ZF26_RAT	Tnks1bp1	Tankyrase 1 binding protein 1	1	RASVSTNQNTDENDQELR	RASVSTNQNTDENDQELR	3	RASVSTNQNTDENDQELR3	357.755		1915.04
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	RATAESANQCLPCDCNGR	RATAESANQC(UniMod:4)LPC(UniMod:4)DC(UniMod:4)NGR	3	RATAESANQC(UniMod:4)LPC(UniMod:4)DC(UniMod:4)NGR3	29681.7	35363.9	41802.1
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	RATDKEVGPLDCK	RATDKEVGPLDC(UniMod:4)K	3	RATDKEVGPLDC(UniMod:4)K3	14158.8	12559.4	10718.5
Q6Q0N0	Q6Q0N0	CSTN1_RAT	Clstn1	Calsyntenin-1	1	RATEDVLVK	RATEDVLVK	2	RATEDVLVK2	4626.65	1103.24	2376.49
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	RATETSEVESLRPPR	RATETSEVESLRPPR	4	RATETSEVESLRPPR4	67584.2	81640.6	67335.6
F1LR42	F1LR42	F1LR42_RAT	Rufy1	RUN and FYVE domain containing 1	1	RATGNLSASCGSALR	RATGNLSASC(UniMod:4)GSALR	3	RATGNLSASC(UniMod:4)GSALR3	3482.07		4596.79
D3ZDI7	D3ZDI7	D3ZDI7_RAT	Ppp2r5a	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	RATLNELVEYVSTNR	RATLNELVEYVSTNR	3	RATLNELVEYVSTNR3	8656.69	7952.22	4234.22
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	RATPEPSSTLSSDTVSR	RATPEPSSTLSSDTVSR	3	RATPEPSSTLSSDTVSR3	160159	114800	141306
B5DF57	B5DF57	B5DF57_RAT	Epb42	protein-glutamine gamma-glutamyltransferase	1	RATQYQPLTASVR	RATQYQPLTASVR	3	RATQYQPLTASVR3	15652.4	11513.7	18323.2
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	RATVQPLPQATGPSNQPSLLASVSQPK	RATVQPLPQATGPSNQPSLLASVSQPK	3	RATVQPLPQATGPSNQPSLLASVSQPK3	112283	103395	99586
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	RATVQPLPQATGPSNQPSLLASVSQPK	RATVQPLPQATGPSNQPSLLASVSQPK	4	RATVQPLPQATGPSNQPSLLASVSQPK4	4649.97	4232.13	3173.33
P61983	P61983	1433G_RAT	Ywhag	14-3-3 protein gamma	1	RATVVESSEK	RATVVESSEK	2	RATVVESSEK2			12067.2
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	RAVAGDASESALLK	RAVAGDASESALLK	3	RAVAGDASESALLK3	12743.4	7645.64	11570.7
Q923S8	Q923S8	PANK4_RAT	Pank4	4'-phosphopantetheine phosphatase	1	RAVASQPESVDAAER	RAVASQPESVDAAER	3	RAVASQPESVDAAER3	3532.29		2165.04
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	RAVEELLESLDLEK	RAVEELLESLDLEK	3	RAVEELLESLDLEK3	3685.13	4233.6	6647.36
B0BNK1	B0BNK1	B0BNK1_RAT	Rab5c	RAB5C, member RAS oncogene family	1	RAVEFQEAQAYADDNSLLFMETSAK	RAVEFQEAQAYADDNSLLFMETSAK	3	RAVEFQEAQAYADDNSLLFMETSAK3	20864.5	17249.7	24317.4
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	RAVEPLGDK	RAVEPLGDK	2	RAVEPLGDK2	422895	424054	393454
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	RAVEPLGDKFNMALVQQMEK	RAVEPLGDKFNMALVQQMEK	3	RAVEPLGDKFNMALVQQMEK3	150376	167063	203059
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	RAVEPLGDKFNMALVQQMEK	RAVEPLGDKFNMALVQQMEK	4	RAVEPLGDKFNMALVQQMEK4	900316	1.11062e+06	1.1794e+06
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	RAVGPSSTQLYMVR	RAVGPSSTQLYMVR	3	RAVGPSSTQLYMVR3	21538.9	38521.4	29693.1
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	RAVGYYSATSK	RAVGYYSATSK	3	RAVGYYSATSK3	8437.5	14930	4841.32
Q5PQL5	Q5PQL5	PTSS1_RAT	Ptdss1	Phosphatidylserine synthase 1	1	RAVLQFTPASWTYVR	RAVLQFTPASWTYVR	3	RAVLQFTPASWTYVR3	4276.58	12327.3	5977.89
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	RAVMVSNVLLINK	RAVMVSNVLLINK	3	RAVMVSNVLLINK3	7094.8	8740.22	2457.61
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	RAVPLALALISVSNPR	RAVPLALALISVSNPR	3	RAVPLALALISVSNPR3	39723.1	37772.3	39886.6
Q5FWT9	Q5FWT9	SIKE1_RAT	Sike1	Suppressor of IKBKE 1	1	RAVQVDDNQFCK	RAVQVDDNQFC(UniMod:4)K	3	RAVQVDDNQFC(UniMod:4)K3	9629.02	16999.2	7816.65
Q6AY20	Q6AY20	MPRD_RAT	M6pr	Cation-dependent mannose-6-phosphate receptor	1	RAVVMISCNR	RAVVMISC(UniMod:4)NR	3	RAVVMISC(UniMod:4)NR3	93490.4	102419	120690
A0A8I6ANI3	A0A8I6ANI3	A0A8I6ANI3_RAT	Ctla2a	Cytotoxic T lymphocyte-associated protein 2 alpha	1	RAVWEESK	RAVWEESK	2	RAVWEESK2	10305.9	12898.8	10832.2
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	RAWISGFTGSAGTAVVTK	RAWISGFTGSAGTAVVTK	3	RAWISGFTGSAGTAVVTK3	5268.11	7622.21	3574.36
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	RAYECVVLLQSK	RAYEC(UniMod:4)VVLLQSK	3	RAYEC(UniMod:4)VVLLQSK3	4809.82	6044.31	6089.63
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	RAYICAHPLDR	RAYIC(UniMod:4)AHPLDR	3	RAYIC(UniMod:4)AHPLDR3	4523.68	11596.5	13813.4
A0A8I5ZTN5	A0A8I5ZTN5	A0A8I5ZTN5_RAT	Adsl	Adenylosuccinate lyase	1	RAYIITGQTYTR	RAYIITGQTYTR	3	RAYIITGQTYTR3	4248.47	2270.35	2128.77
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	RCCHCCMLGR	RC(UniMod:4)C(UniMod:4)HC(UniMod:4)C(UniMod:4)MLGR	3	RC(UniMod:4)C(UniMod:4)HC(UniMod:4)C(UniMod:4)MLGR3	18923.9	18242.8	
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	RCCQDGMTK	RC(UniMod:4)C(UniMod:4)QDGMTK	2	RC(UniMod:4)C(UniMod:4)QDGMTK2			139046
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	RCCQDGMTK	RC(UniMod:4)C(UniMod:4)QDGMTK	3	RC(UniMod:4)C(UniMod:4)QDGMTK3			46595.6
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	RCCQDGMTKLPMAR	RC(UniMod:4)C(UniMod:4)QDGMTKLPMAR	3	RC(UniMod:4)C(UniMod:4)QDGMTKLPMAR3	40270.4	59221.9	36408.2
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	RCCQDGMTKLPMAR	RC(UniMod:4)C(UniMod:4)QDGMTKLPMAR	4	RC(UniMod:4)C(UniMod:4)QDGMTKLPMAR4	72677.1	160518	119506
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	RCDNSCLTCNGPGFK	RC(UniMod:4)DNSC(UniMod:4)LTC(UniMod:4)NGPGFK	3	RC(UniMod:4)DNSC(UniMod:4)LTC(UniMod:4)NGPGFK3	18983.9	17562.6	20649
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	RCDSSPCFR	RC(UniMod:4)DSSPC(UniMod:4)FR	2	RC(UniMod:4)DSSPC(UniMod:4)FR2	27461.7	35983	37254.8
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	RCDSSPCFR	RC(UniMod:4)DSSPC(UniMod:4)FR	3	RC(UniMod:4)DSSPC(UniMod:4)FR3	564693	686064	677059
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	RCEAACGGFLTK	RC(UniMod:4)EAAC(UniMod:4)GGFLTK	3	RC(UniMod:4)EAAC(UniMod:4)GGFLTK3	3252.12	9225.52	1877.8
Q5PQQ8	Q5PQQ8	ITGBL_RAT	Itgbl1	Integrin beta-like protein 1	1	RCEDLDGVVCGGR	RC(UniMod:4)EDLDGVVC(UniMod:4)GGR	3	RC(UniMod:4)EDLDGVVC(UniMod:4)GGR3	7909.96	12647	9986.14
A0A0G2K542	A0A0G2K542	A0A0G2K542_RAT	Ugp2	UTP--glucose-1-phosphate uridylyltransferase	1	RCEFVMEVTNK	RC(UniMod:4)EFVMEVTNK	3	RC(UniMod:4)EFVMEVTNK3	18386.7	19759.8	14600.5
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	RCELCDDGYFGDPLGSNGPVR	RC(UniMod:4)ELC(UniMod:4)DDGYFGDPLGSNGPVR	3	RC(UniMod:4)ELC(UniMod:4)DDGYFGDPLGSNGPVR3	116804	130448	128550
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	RCESCAPGYEGNPIQPGGK	RC(UniMod:4)ESC(UniMod:4)APGYEGNPIQPGGK	3	RC(UniMod:4)ESC(UniMod:4)APGYEGNPIQPGGK3	56307.3	74930	61957.5
G3V6N2	G3V6N2	G3V6N2_RAT	Tmed4	Transmembrane p24 trafficking protein 4	1	RCFIEEIPDETMVIGNYR	RC(UniMod:4)FIEEIPDETMVIGNYR	3	RC(UniMod:4)FIEEIPDETMVIGNYR3	4160.44	1936.18	3690.69
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	RCGVSELEK	RC(UniMod:4)GVSELEK	2	RC(UniMod:4)GVSELEK2	1275.68	1660.49	
D3ZJF8	D3ZJF8;F7EZQ4	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	0	RCHCGPGGDSLICK	RC(UniMod:4)HC(UniMod:4)GPGGDSLIC(UniMod:4)K	2	RC(UniMod:4)HC(UniMod:4)GPGGDSLIC(UniMod:4)K2	2863.8	9004.84	5862.15
D3ZJF8	D3ZJF8;F7EZQ4	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	0	RCHCGPGGDSLICK	RC(UniMod:4)HC(UniMod:4)GPGGDSLIC(UniMod:4)K	3	RC(UniMod:4)HC(UniMod:4)GPGGDSLIC(UniMod:4)K3	104686	197061	181308
D3ZJF8	D3ZJF8;F7EZQ4	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	0	RCHCGPGGDSLICK	RC(UniMod:4)HC(UniMod:4)GPGGDSLIC(UniMod:4)K	4	RC(UniMod:4)HC(UniMod:4)GPGGDSLIC(UniMod:4)K4	191204	299107	312589
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	RCHEFVTFSCPGADKGPDTDDPR	RC(UniMod:4)HEFVTFSC(UniMod:4)PGADKGPDTDDPR	4	RC(UniMod:4)HEFVTFSC(UniMod:4)PGADKGPDTDDPR4	19350.9	28020.4	19146.9
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	RCLFVCR	RC(UniMod:4)LFVC(UniMod:4)R	2	RC(UniMod:4)LFVC(UniMod:4)R2	979.656		
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	RCLMQNDLK	RC(UniMod:4)LMQNDLK	2	RC(UniMod:4)LMQNDLK2	11571.5	7763.44	9718.16
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	RCLMQNDLK	RC(UniMod:4)LMQNDLK	3	RC(UniMod:4)LMQNDLK3	16083	24305.4	16746.6
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	RCLYASVLTAQPR	RC(UniMod:4)LYASVLTAQPR	3	RC(UniMod:4)LYASVLTAQPR3	9286.09	16813.8	6206.37
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	RCNDMMNLGR	RC(UniMod:4)NDMMNLGR	2	RC(UniMod:4)NDMMNLGR2	5754.77	6257.41	3641.76
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	RCNDMMNLGR	RC(UniMod:4)NDMMNLGR	3	RC(UniMod:4)NDMMNLGR3	177869	231051	198588
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	RCPDYIIQK	RC(UniMod:4)PDYIIQK	2	RC(UniMod:4)PDYIIQK2	7379.31	6153.36	5220.06
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	RCPDYIIQK	RC(UniMod:4)PDYIIQK	3	RC(UniMod:4)PDYIIQK3	16425.4	11199.8	11290.4
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	RCPPGIWPSHK	RC(UniMod:4)PPGIWPSHK	3	RC(UniMod:4)PPGIWPSHK3	19084.2	35892.5	24426.3
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	RCPSQSSSRPATGISQPPTTPTGQATR	RC(UniMod:4)PSQSSSRPATGISQPPTTPTGQATR	4	RC(UniMod:4)PSQSSSRPATGISQPPTTPTGQATR4	15440.3	10641.4	15269.9
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	RCPTCHNIIDNCK	RC(UniMod:4)PTC(UniMod:4)HNIIDNC(UniMod:4)K	3	RC(UniMod:4)PTC(UniMod:4)HNIIDNC(UniMod:4)K3	41488.6	34737.9	37742.3
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	RCPTCHNIIDNCK	RC(UniMod:4)PTC(UniMod:4)HNIIDNC(UniMod:4)K	4	RC(UniMod:4)PTC(UniMod:4)HNIIDNC(UniMod:4)K4	17020		25533.2
Q4V8B7	Q4V8B7	HSDL1_RAT	Hsdl1	Inactive hydroxysteroid dehydrogenase-like protein 1	1	RCPWLAPSPR	RC(UniMod:4)PWLAPSPR	3	RC(UniMod:4)PWLAPSPR3	51320	54020.6	53906.4
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	RCQPIEFDSTGNR	RC(UniMod:4)QPIEFDSTGNR	3	RC(UniMod:4)QPIEFDSTGNR3	28146.5	34424.6	27586.2
P05065	A0A8I6ANB6;Q6AY07;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	RCQYVTEK	RC(UniMod:4)QYVTEK	2	RC(UniMod:4)QYVTEK2	9543.55		11670.2
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	RCSILDCDLK	RC(UniMod:4)SILDC(UniMod:4)DLK	2	RC(UniMod:4)SILDC(UniMod:4)DLK2		6294.09	4429.78
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	RCSILDCDLK	RC(UniMod:4)SILDC(UniMod:4)DLK	3	RC(UniMod:4)SILDC(UniMod:4)DLK3	11859.8	19307.1	19735.5
A0A8I5Y7I2	A0A8I5Y7I2	A0A8I5Y7I2_RAT	Kctd12	Potassium channel tetramerization domain containing 12	1	RCTVVSVPDSLLWR	RC(UniMod:4)TVVSVPDSLLWR	3	RC(UniMod:4)TVVSVPDSLLWR3	23726.8	21781.2	19295.3
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	RCVMDDDNEVRDR	RC(UniMod:4)VMDDDNEVRDR	3	RC(UniMod:4)VMDDDNEVRDR3	2282.52	6070.65	4263.82
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	RCVMDDDNEVRDR	RC(UniMod:4)VMDDDNEVRDR	4	RC(UniMod:4)VMDDDNEVRDR4	20190	31564.3	30713.9
A0A8I6AMS6	A0A8I6AMS6	A0A8I6AMS6_RAT	Rangap1	RAN GTPase activating protein 1	1	RDAALVVAEAVADK	RDAALVVAEAVADK	3	RDAALVVAEAVADK3	15846.2	7986.5	10271.6
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	RDADDLEK	RDADDLEK	1	RDADDLEK1			10507
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	RDADSIHQYLLQR	RDADSIHQYLLQR	3	RDADSIHQYLLQR3	3063.35	2632.4	1475.43
Q6PDU1	Q6PDU1	SRSF2_RAT	Srsf2	Serine/arginine-rich splicing factor 2	1	RDAEDAMDAMDGAVLDGR	RDAEDAMDAMDGAVLDGR	3	RDAEDAMDAMDGAVLDGR3	10068.6	6669.91	7241.23
A0A8I6A822	A0A8I6A822	A0A8I6A822_RAT	Tm9sf3	Transmembrane 9 superfamily member	1	RDAFVYAIK	RDAFVYAIK	2	RDAFVYAIK2	28431.3	20831.8	25048.3
P63329	P63329	PP2BA_RAT	Ppp3ca	Protein phosphatase 3 catalytic subunit alpha	1	RDAMPSDANLNSINK	RDAMPSDANLNSINK	3	RDAMPSDANLNSINK3		1425.14	
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	RDAPVSTDSEMESGSK	RDAPVSTDSEMESGSK	3	RDAPVSTDSEMESGSK3		6488.87	13017.6
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	RDAQGQQMIFPYYGR	RDAQGQQMIFPYYGR	3	RDAQGQQMIFPYYGR3	5652.52	9255.64	
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	RDAQGQQMIFPYYGREEELR	RDAQGQQMIFPYYGREEELR	4	RDAQGQQMIFPYYGREEELR4	2537.94	6132.86	6637.58
D4A3E2	D4A3E2	D4A3E2_RAT	Npepl1	Aminopeptidase-like 1	1	RDCGGAAAILGAFR	RDC(UniMod:4)GGAAAILGAFR	3	RDC(UniMod:4)GGAAAILGAFR3	9172.68	13989	13219.1
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	RDDECPSTSSPVSFPGSDGGAK	RDDEC(UniMod:4)PSTSSPVSFPGSDGGAK	3	RDDEC(UniMod:4)PSTSSPVSFPGSDGGAK3	37379.4	44567.4	39722.9
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	RDDGSWEVIEGYR	RDDGSWEVIEGYR	3	RDDGSWEVIEGYR3	26405.4	29669.6	34730.3
Q62763	Q62762;Q62763;Q62761	KC1G3_RAT	Csnk1g3	Casein kinase I isoform gamma-3	0	RDDLEALGHMFMYFLR	RDDLEALGHMFMYFLR	3	RDDLEALGHMFMYFLR3		5437.17	739.818
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	RDDPGEFR	RDDPGEFR	2	RDDPGEFR2	14359.8	9812.92	15281.1
Q07803	Q07803	EFGM_RAT	Gfm1	Elongation factor G, mitochondrial	1	RDDSHPFVGLAFK	RDDSHPFVGLAFK	3	RDDSHPFVGLAFK3	9962.45	6815.42	2177.18
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	RDEESSVPETIDDLMTPEEKDK	RDEESSVPETIDDLMTPEEKDK	3	RDEESSVPETIDDLMTPEEKDK3	14618	15324.7	21304.9
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	RDEESSVPETIDDLMTPEEKDK	RDEESSVPETIDDLMTPEEKDK	4	RDEESSVPETIDDLMTPEEKDK4	8656.29	10360.8	15847.2
Q68FV8	Q68FV8;A0A8I5ZW20	UBTD1_RAT	Ubtd1	Ubiquitin domain-containing protein 1	0	RDEFWDTAPAFEGR	RDEFWDTAPAFEGR	3	RDEFWDTAPAFEGR3		12574.6	10447.5
F7FQB8	A0A8I5ZWC6;F7FQB8	F7FQB8_RAT	Kpna4	Karyopherin subunit alpha 4	0	RDEHLLK	RDEHLLK	2	RDEHLLK2	17314.3	23860.1	26005.9
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	RDEIAIMETINNGK	RDEIAIMETINNGK	3	RDEIAIMETINNGK3	27114.9	25793.9	17606.5
A0A8I6AKR4	A0A8I6AKR4	A0A8I6AKR4_RAT	Ap3s1	Adaptor related protein complex 3 subunit sigma 1	1	RDENVCNFLEGGLLIGGSDNK	RDENVC(UniMod:4)NFLEGGLLIGGSDNK	3	RDENVC(UniMod:4)NFLEGGLLIGGSDNK3	12795.6	7262.66	7593.72
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	RDENWDKEIEK	RDENWDKEIEK	2	RDENWDKEIEK2	1489.02	1142.15	5577.26
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	RDENWDKEIEK	RDENWDKEIEK	3	RDENWDKEIEK3	39787	46405.6	50329.3
A0A8I6ATH0	A0A8I6ATH0	A0A8I6ATH0_RAT	Braf	non-specific serine/threonine protein kinase	1	RDERPLFPQILASIELLAR	RDERPLFPQILASIELLAR	4	RDERPLFPQILASIELLAR4	5526.23	6663.62	1709.83
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	RDETALQEEEELQLALALSQSEAEEKER	RDETALQEEEELQLALALSQSEAEEKER	4	RDETALQEEEELQLALALSQSEAEEKER4	8094.92	12421.5	3919.19
A0A0G2KAF4	A0A0G2KAF4	A0A0G2KAF4_RAT	Nfxl1	Nuclear transcription factor, X-box binding-like 1	1	RDEVAVQLSPWQK	RDEVAVQLSPWQK	3	RDEVAVQLSPWQK3	7509.59	5876.45	2858.59
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	RDFFLANASR	RDFFLANASR	2	RDFFLANASR2		3714.98	1973.65
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	RDFFLANASR	RDFFLANASR	3	RDFFLANASR3	154761	215495	200520
P07895	P07895	SODM_RAT	Sod2	Superoxide dismutase [Mn], mitochondrial	1	RDFGSFEK	RDFGSFEK	2	RDFGSFEK2	306418	278102	259985
A0A0G2K0G9	A0A0G2K0G9	A0A0G2K0G9_RAT	Rin3	Ras and Rab interactor 3	1	RDFHFVYRPQDSGR	RDFHFVYRPQDSGR	4	RDFHFVYRPQDSGR4	29334.5	39961.4	28134.7
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	RDFLQLFAPR	RDFLQLFAPR	3	RDFLQLFAPR3	196772	210157	205308
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	RDFMAALEAEPYDDIVGETVEK	RDFMAALEAEPYDDIVGETVEK	3	RDFMAALEAEPYDDIVGETVEK3	7883.9	5353.91	10022.1
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	RDFQGKPNFEEFFEILTPK	RDFQGKPNFEEFFEILTPK	3	RDFQGKPNFEEFFEILTPK3		11618.1	10396.7
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	RDFQGKPNFEEFFEILTPK	RDFQGKPNFEEFFEILTPK	4	RDFQGKPNFEEFFEILTPK4	31729.1	32638.6	32596.1
Q5XIU9	Q5XIU9	PGRC2_RAT	Pgrmc2	Membrane-associated progesterone receptor component 2	1	RDFSLEQLR	RDFSLEQLR	2	RDFSLEQLR2	2087.49		
Q5XIU9	Q5XIU9	PGRC2_RAT	Pgrmc2	Membrane-associated progesterone receptor component 2	1	RDFSLEQLR	RDFSLEQLR	3	RDFSLEQLR3	65059.3	69416.9	78953.8
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	RDFSMADK	RDFSMADK	2	RDFSMADK2	14139.9	14861.7	18544.8
P29066	P29066	ARRB1_RAT	Arrb1	Beta-arrestin-1	1	RDFVDHIDLVDPVDGVVLVDPEYLK	RDFVDHIDLVDPVDGVVLVDPEYLK	4	RDFVDHIDLVDPVDGVVLVDPEYLK4	23718.6	22347.5	20009.8
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	RDFVDHLDK	RDFVDHLDK	2	RDFVDHLDK2	3153.03	2214.99	
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	RDFVDHLDK	RDFVDHLDK	3	RDFVDHLDK3	26040	26091.8	33755
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	RDFVDLIIK	RDFVDLIIK	2	RDFVDLIIK2	16159	11865.1	17431.8
Q6AYB4	Q6AYB4	HSP7E_RAT	Hspa14	Heat shock 70 kDa protein 14	1	RDGSLQVTCTDQETGK	RDGSLQVTC(UniMod:4)TDQETGK	3	RDGSLQVTC(UniMod:4)TDQETGK3	3223.74	1859.56	
Q8VHK0	Q8VHK0	ACOT8_RAT	Acot8	Acyl-coenzyme A thioesterase 8	1	RDGVLAVTCAQEGVIR	RDGVLAVTC(UniMod:4)AQEGVIR	3	RDGVLAVTC(UniMod:4)AQEGVIR3	3489.63	4389.39	5171.4
F1LTN6	P01835;F1LTN6	F1LTN6_RAT	AABR07060872.1	Ig-like domain-containing protein	0	RDGVLDSVTDQDSK	RDGVLDSVTDQDSK	2	RDGVLDSVTDQDSK2	1.62374e+06	1.40232e+06	1.3998e+06
F1LTN6	P01835;F1LTN6	F1LTN6_RAT	AABR07060872.1	Ig-like domain-containing protein	0	RDGVLDSVTDQDSK	RDGVLDSVTDQDSK	3	RDGVLDSVTDQDSK3	22514.9	15212.8	13821.5
F1LTN6	P01835;F1LTN6	F1LTN6_RAT	AABR07060872.1	Ig-like domain-containing protein	0	RDGVLDSVTDQDSKDSTYSMSSTLSLTK	RDGVLDSVTDQDSKDSTYSMSSTLSLTK	4	RDGVLDSVTDQDSKDSTYSMSSTLSLTK4	1.20789e+06	1.42266e+06	1.47724e+06
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	RDHALLEEQSK	RDHALLEEQSK	2	RDHALLEEQSK2	17371.4	16901.6	13559.1
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	RDHALLEEQSK	RDHALLEEQSK	3	RDHALLEEQSK3	1.04295e+06	1.22074e+06	1.16072e+06
Q9JLU4	Q9JLU4	SHAN3_RAT	Shank3	SH3 and multiple ankyrin repeat domains protein 3	1	RDHEGFGFVLR	RDHEGFGFVLR	3	RDHEGFGFVLR3	4116.9	4816.39	1571.86
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	RDHFEEAMR	RDHFEEAMR	2	RDHFEEAMR2	7241.99	14438.7	8192.1
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	RDHFEEAMR	RDHFEEAMR	3	RDHFEEAMR3	1.64881e+06	1.65641e+06	1.74807e+06
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	RDHIIDDALVR	RDHIIDDALVR	3	RDHIIDDALVR3	13643.1	14307.5	14541.5
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	RDHILAILALR	RDHILAILALR	3	RDHILAILALR3	73803.8	73951.4	61738.9
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	RDHVFEDSYR	RDHVFEDSYR	3	RDHVFEDSYR3	73044.2	54197.5	35501.6
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	RDIDPEDEELELGPR	RDIDPEDEELELGPR	2	RDIDPEDEELELGPR2	14612.8	8969.71	15443.6
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	RDIDPEDEELELGPR	RDIDPEDEELELGPR	3	RDIDPEDEELELGPR3	143027	119860	160325
Q62902	Q62902	LMAN1_RAT	Lman1	Protein ERGIC-53	1	RDIDSLAQR	RDIDSLAQR	2	RDIDSLAQR2	8212.1	5798.42	7523.1
P01026	P01026	CO3_RAT	C3	Complement C3	1	RDILSSHNQYGILPLSWNIPELVNMGQWK	RDILSSHNQYGILPLSWNIPELVNMGQWK	4	RDILSSHNQYGILPLSWNIPELVNMGQWK4	53878.7	55122.9	44081.7
Q3B7D1	Q3B7D1	UBE2Z_RAT	Ube2z	Ubiquitin-conjugating enzyme E2 Z	1	RDIMSIYK	RDIMSIYK	2	RDIMSIYK2	11365.5	13887.5	16735.9
Q3B7D1	Q3B7D1	UBE2Z_RAT	Ube2z	Ubiquitin-conjugating enzyme E2 Z	1	RDIMSIYKEPPPGMFVVPDTVDMTK	RDIMSIYKEPPPGMFVVPDTVDMTK	4	RDIMSIYKEPPPGMFVVPDTVDMTK4	13399.7	24778.6	30652.6
D4A4T0	D4A4T0	D4A4T0_RAT	Stub1	STIP1 homology and U-box containing protein 1	1	RDIPDYLCGK	RDIPDYLC(UniMod:4)GK	2	RDIPDYLC(UniMod:4)GK2	6130.03	7567.33	5297.08
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	RDIQENDEEAVQVK	RDIQENDEEAVQVK	3	RDIQENDEEAVQVK3	18377.9	13484.6	9692.91
P08689	P08689	SHBG_RAT	Shbg	Sex hormone-binding globulin	1	RDIWLGHQAQLSTSAR	RDIWLGHQAQLSTSAR	3	RDIWLGHQAQLSTSAR3	4916.14	2359.5	4474.05
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	RDIYDQGGEQAIK	RDIYDQGGEQAIK	2	RDIYDQGGEQAIK2	6437.73	8785.01	3551.86
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	RDIYDQGGEQAIK	RDIYDQGGEQAIK	3	RDIYDQGGEQAIK3	41696.9	37137.3	52309.8
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	RDKELDDALDELSDSLGQR	RDKELDDALDELSDSLGQR	3	RDKELDDALDELSDSLGQR3	15948.1	19909.9	17827.5
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	RDKELDDALDELSDSLGQR	RDKELDDALDELSDSLGQR	4	RDKELDDALDELSDSLGQR4	13797.7	10592.3	22603.2
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	RDKEVAALTSQMDMLR	RDKEVAALTSQMDMLR	3	RDKEVAALTSQMDMLR3	25268.4	35719.6	38860.6
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	RDKEVAALTSQMDMLR	RDKEVAALTSQMDMLR	4	RDKEVAALTSQMDMLR4	31978	35191.8	40198.8
D3ZPP2	D3ZPP2	D3ZPP2_RAT	Arl8a	ADP-ribosylation factor like GTPase 8A	1	RDLAGALDEKELIEK	RDLAGALDEKELIEK	3	RDLAGALDEKELIEK3	14825.2	15091.8	15564.7
D3ZPP2	D3ZPP2	D3ZPP2_RAT	Arl8a	ADP-ribosylation factor like GTPase 8A	1	RDLAGALDEKELIEK	RDLAGALDEKELIEK	4	RDLAGALDEKELIEK4	4654.4	3272.47	7642.66
P35815	P35815	PPM1B_RAT	Ppm1b	Protein phosphatase 1B	1	RDLELDK	RDLELDK	2	RDLELDK2	85117.1	82930.7	77005.7
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	RDLENFVK	RDLENFVK	2	RDLENFVK2	29619.8	35655.2	30655.7
A0A8I6A5H5	A0A8I6A5H5	A0A8I6A5H5_RAT	Rela	RELA proto-oncogene, NF-kB subunit	1	RDLEQAISQR	RDLEQAISQR	3	RDLEQAISQR3	9930.33	8191.49	17277.6
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	RDLESVR	RDLESVR	2	RDLESVR2	2507.01	4233.61	4910.01
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	RDLGEELEALK	RDLGEELEALK	2	RDLGEELEALK2	1.56102e+06	1.88485e+06	1.63152e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	RDLGEELEALK	RDLGEELEALK	3	RDLGEELEALK3	51926.1	65559.9	63090.6
D3ZUB7	D3ZUB7	D3ZUB7_RAT	Anapc4	Anaphase-promoting complex subunit 4	1	RDLIALANTTGEVLLHR	RDLIALANTTGEVLLHR	3	RDLIALANTTGEVLLHR3	7502.69	10467.2	9398.29
D3ZUB7	D3ZUB7	D3ZUB7_RAT	Anapc4	Anaphase-promoting complex subunit 4	1	RDLIALANTTGEVLLHR	RDLIALANTTGEVLLHR	4	RDLIALANTTGEVLLHR4	1763.29	7036.76	3495.23
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	RDLLFKPVAELR	RDLLFKPVAELR	3	RDLLFKPVAELR3	45648.5	78967.3	46705.7
Q68FT7	Q68FT7	Q68FT7_RAT	Farsb	Phenylalanine--tRNA ligase beta subunit	1	RDLLFQVLGR	RDLLFQVLGR	3	RDLLFQVLGR3	6245.67	3957.72	6107.18
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	RDLLLELAEFMR	RDLLLELAEFMR	3	RDLLLELAEFMR3	1244.71	911.058	1647
A0A0G2K059	A0A0G2K059	A0A0G2K059_RAT	Mcu	Calcium uniporter protein	1	RDLLSHENAETLNDVK	RDLLSHENAETLNDVK	3	RDLLSHENAETLNDVK3	40537.7	60781.7	62127.8
A0A0G2K059	A0A0G2K059	A0A0G2K059_RAT	Mcu	Calcium uniporter protein	1	RDLLSHENAETLNDVK	RDLLSHENAETLNDVK	4	RDLLSHENAETLNDVK4	35596.2	40919.3	30191.4
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	RDLMACAQTGSGK	RDLMAC(UniMod:4)AQTGSGK	3	RDLMAC(UniMod:4)AQTGSGK3	22852.5	28143.1	30556.3
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	RDLNPEEFWEIIGELGDGAFGK	RDLNPEEFWEIIGELGDGAFGK	3	RDLNPEEFWEIIGELGDGAFGK3		12318.4	5638.96
Q66HA6	Q66HA6	ARL8B_RAT	Arl8b	ADP-ribosylation factor-like protein 8B	1	RDLPNALDEK	RDLPNALDEK	2	RDLPNALDEK2	48770.3	38794.9	45791.2
P08650	P08650	CO5_RAT	C5	Complement C5	1	RDLQLLHQK	RDLQLLHQK	3	RDLQLLHQK3	97297	106818	79485.1
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	RDLQSYIYTITFASTR	RDLQSYIYTITFASTR	3	RDLQSYIYTITFASTR3	40794.1	41366.2	40213.6
A0A8I6AS17	A0A8I6AS17	A0A8I6AS17_RAT	Bsdc1	BSD domain containing 1	1	RDLTEFTQVVQHDTACTIAATASVVK	RDLTEFTQVVQHDTAC(UniMod:4)TIAATASVVK	4	RDLTEFTQVVQHDTAC(UniMod:4)TIAATASVVK4	10973.6	11085.4	10138.9
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	RDMPPAFIK	RDMPPAFIK	2	RDMPPAFIK2	30446.5	16067.8	22375.9
Q62936	Q62936	DLG3_RAT	Dlg3	Disks large homolog 3	1	RDNEVDGQDYHFVVSR	RDNEVDGQDYHFVVSR	4	RDNEVDGQDYHFVVSR4	874.004		
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	RDNPEEEYGYEDLK	RDNPEEEYGYEDLK	3	RDNPEEEYGYEDLK3	6237.83	9153.72	18526.8
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	RDPAFEGR	RDPAFEGR	2	RDPAFEGR2	72598.7	77410.5	66481.4
O08561	O08561	PI4KB_RAT	Pi4kb	Phosphatidylinositol 4-kinase beta	1	RDPEDPSAVALKEPWQEK	RDPEDPSAVALKEPWQEK	3	RDPEDPSAVALKEPWQEK3	1138.53	3004.34	2876.95
Q5XIA1	Q5XIA1	NCLN_RAT	Ncln	BOS complex subunit NCLN	1	RDPEFVFYDQLK	RDPEFVFYDQLK	3	RDPEFVFYDQLK3	49018.2	35286.9	45513.7
O35217	O35217	MINP1_RAT	Minpp1	Multiple inositol polyphosphate phosphatase 1	1	RDPELLAGTCTPVQLVALIR	RDPELLAGTC(UniMod:4)TPVQLVALIR	3	RDPELLAGTC(UniMod:4)TPVQLVALIR3	26585.4	5695.9	17706.3
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	RDPGSVGDTIPSAELVK	RDPGSVGDTIPSAELVK	3	RDPGSVGDTIPSAELVK3	27391.6	31083.8	27543.6
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	RDPGVITYDLPTPPGEK	RDPGVITYDLPTPPGEK	2	RDPGVITYDLPTPPGEK2	5696.03	6586.65	7099.47
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	RDPGVITYDLPTPPGEK	RDPGVITYDLPTPPGEK	3	RDPGVITYDLPTPPGEK3	170791	178827	178655
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	RDPHLACVAYER	RDPHLAC(UniMod:4)VAYER	2	RDPHLAC(UniMod:4)VAYER2	15145.8	12948.3	10036.1
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	RDPHLACVAYER	RDPHLAC(UniMod:4)VAYER	3	RDPHLAC(UniMod:4)VAYER3	809941	848482	703168
F1LXF5	F1LXF5	F1LXF5_RAT	Get4	Guided entry of tail-anchored proteins factor 4	1	RDPMYNEYLDR	RDPMYNEYLDR	3	RDPMYNEYLDR3	70014.6	64045.4	70933.8
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	RDPPSDPSPLEAEYQR	RDPPSDPSPLEAEYQR	2	RDPPSDPSPLEAEYQR2	8316.71	8616.33	7404.87
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	RDPPSDPSPLEAEYQR	RDPPSDPSPLEAEYQR	3	RDPPSDPSPLEAEYQR3	156482	130550	161385
Q5XIT3	Q5XIT3	YIPF2_RAT	Yipf2	Protein YIPF2	1	RDPSIHYSPQFHK	RDPSIHYSPQFHK	4	RDPSIHYSPQFHK4	7932	6204.27	
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	RDPSSVPNADNAFTLFYVK	RDPSSVPNADNAFTLFYVK	3	RDPSSVPNADNAFTLFYVK3	11501.1	6311.72	7103.6
Q62703	Q62703	RCN2_RAT	Rcn2	Reticulocalbin-2	1	RDPTANEDPEWILVEK	RDPTANEDPEWILVEK	3	RDPTANEDPEWILVEK3	14238.1	16556.3	14344.9
Q62703	Q62703	RCN2_RAT	Rcn2	Reticulocalbin-2	1	RDPTANEDPEWILVEKDR	RDPTANEDPEWILVEKDR	4	RDPTANEDPEWILVEKDR4	7034.55	6048.43	10221.4
D3Z8E0	D3Z8E0	D3Z8E0_RAT	Rps6ka3	Ribosomal protein S6 kinase	1	RDPTEEIEILLR	RDPTEEIEILLR	3	RDPTEEIEILLR3	6990.1	5955.36	6078.36
Q62825	Q62825	EXOC3_RAT	Exoc3	Exocyst complex component 3	1	RDPTLLVSVVR	RDPTLLVSVVR	3	RDPTLLVSVVR3	25433.8	25678	19656.4
A0A8I6A5Y0	A0A8I6A5Y0	A0A8I6A5Y0_RAT	Vta1	Vesicle trafficking 1	1	RDPVVAYYCR	RDPVVAYYC(UniMod:4)R	3	RDPVVAYYC(UniMod:4)R3	19362.2	18624.7	11065.6
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	RDPWELDLDIK	RDPWELDLDIK	2	RDPWELDLDIK2	112344	105823	96352.3
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	RDPWELDLDIK	RDPWELDLDIK	3	RDPWELDLDIK3	246240	205648	208497
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	RDQALTEEHSR	RDQALTEEHSR	3	RDQALTEEHSR3			531814
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	RDQAVMISGESGAGK	RDQAVMISGESGAGK	3	RDQAVMISGESGAGK3	52813.7	72952.5	47448.8
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	RDQDNMQAELNR	RDQDNMQAELNR	3	RDQDNMQAELNR3	93849.9	86640.5	91491.8
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	RDQTWREDVVTNGIGR	RDQTWREDVVTNGIGR	4	RDQTWREDVVTNGIGR4	12454.4	10841.7	25738
A0A0G2JUF2	A0A0G2JUF2	A0A0G2JUF2_RAT	Snx30	Sorting nexin family member 30	1	RDQVHAEYEAK	RDQVHAEYEAK	3	RDQVHAEYEAK3			18403.6
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	RDSETEVEELR	RDSETEVEELR	3	RDSETEVEELR3	4664.2	6232.32	4663.17
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	RDSETEVEELRK	RDSETEVEELRK	3	RDSETEVEELRK3	112769	130006	98307.8
A0A0G2K712	A0A0G2K712	A0A0G2K712_RAT	Tbc1d5	TBC1 domain family, member 5	1	RDSFFSHIAR	RDSFFSHIAR	3	RDSFFSHIAR3		5639.44	
D3ZLT1	D3ZLT1	D3ZLT1_RAT	Ndufb7	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7	1	RDSFPNFVACK	RDSFPNFVAC(UniMod:4)K	2	RDSFPNFVAC(UniMod:4)K2	6856.98	5123.09	4359.73
D3ZLT1	D3ZLT1	D3ZLT1_RAT	Ndufb7	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7	1	RDSFPNFVACK	RDSFPNFVAC(UniMod:4)K	3	RDSFPNFVAC(UniMod:4)K3	39792.7	34185.7	36237.8
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	RDSLIKK	RDSLIKK	2	RDSLIKK2			4420.51
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	RDSQMVVDSFK	RDSQMVVDSFK	2	RDSQMVVDSFK2	8067.27	5004.1	8430.82
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	RDSQMVVDSFK	RDSQMVVDSFK	3	RDSQMVVDSFK3	81161	63476.4	93589.8
A0A8I6ATH0	A0A8I6ATH0	A0A8I6ATH0_RAT	Braf	non-specific serine/threonine protein kinase	1	RDSSDDWEIPDGQITVGQR	RDSSDDWEIPDGQITVGQR	3	RDSSDDWEIPDGQITVGQR3	5457.16	5739.18	6447.69
Q63448	Q63448	ACOX3_RAT	Acox3	Peroxisomal acyl-coenzyme A oxidase 3	1	RDSVLWSDIPK	RDSVLWSDIPK	3	RDSVLWSDIPK3	4823.28	4095.98	
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	RDTANLFPHK	RDTANLFPHK	2	RDTANLFPHK2	13339.5		5902.55
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	RDTANLFPHK	RDTANLFPHK	3	RDTANLFPHK3	174715	91005.4	104075
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	RDTENIYGATLLLR	RDTENIYGATLLLR	3	RDTENIYGATLLLR3	16073.9	22167.8	22694.5
P05712	P05712	RAB2A_RAT	Rab2a	Ras-related protein Rab-2A	1	RDTFNHLTTWLEDAR	RDTFNHLTTWLEDAR	3	RDTFNHLTTWLEDAR3	30188.4	28174.8	30542.2
P05712	P05712	RAB2A_RAT	Rab2a	Ras-related protein Rab-2A	1	RDTFNHLTTWLEDAR	RDTFNHLTTWLEDAR	4	RDTFNHLTTWLEDAR4	24811.4	31005.3	28979.7
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	RDTINGR	RDTINGR	2	RDTINGR2			15637.7
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	RDTINPLYDETFR	RDTINPLYDETFR	2	RDTINPLYDETFR2	19557.8	12874.1	11854.5
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	RDTINPLYDETFR	RDTINPLYDETFR	3	RDTINPLYDETFR3	665326	739342	732260
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	RDTINPLYDETFRYEISESLLAQR	RDTINPLYDETFRYEISESLLAQR	4	RDTINPLYDETFRYEISESLLAQR4	6029.22	15230.2	12760
P43253	P43253	PI2R_RAT	Ptgir	Prostacyclin receptor	1	RDTLAPDSLQAK	RDTLAPDSLQAK	3	RDTLAPDSLQAK3	19016.1	20836.7	27902.6
A0A0G2K516	A0A0G2K516	A0A0G2K516_RAT	Stx11	Syntaxin 11	1	RDTNSIAK	RDTNSIAK	2	RDTNSIAK2			15808.9
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	RDTSLFSDEFK	RDTSLFSDEFK	2	RDTSLFSDEFK2	1072.68	3892.49	8672.5
M0R915	M0R915;A0A8I6GLQ4	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	0	RDTVQCFSCGGCLGNWEEGDDPWKEHAK	RDTVQC(UniMod:4)FSC(UniMod:4)GGC(UniMod:4)LGNWEEGDDPWKEHAK	4	RDTVQC(UniMod:4)FSC(UniMod:4)GGC(UniMod:4)LGNWEEGDDPWKEHAK4	6013.05	5369.6	2618.13
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	RDVDECQLFQDQVCK	RDVDEC(UniMod:4)QLFQDQVC(UniMod:4)K	2	RDVDEC(UniMod:4)QLFQDQVC(UniMod:4)K2	1572.22	2749.44	
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	RDVDECQLFQDQVCK	RDVDEC(UniMod:4)QLFQDQVC(UniMod:4)K	3	RDVDEC(UniMod:4)QLFQDQVC(UniMod:4)K3	73312.4	93526	64389.2
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	RDVDFELIK	RDVDFELIK	2	RDVDFELIK2	10647.1	8809.54	4707.76
O88377	O88377	PI42B_RAT	Pip4k2b	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta	1	RDVEFLAQLK	RDVEFLAQLK	2	RDVEFLAQLK2	13699.9	11886	6338.65
O88377	O88377	PI42B_RAT	Pip4k2b	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta	1	RDVEFLAQLK	RDVEFLAQLK	3	RDVEFLAQLK3	56200.6	69981.8	75485.7
O55171	O55171	ACOT2_RAT	Acot2	Acyl-coenzyme A thioesterase 2, mitochondrial	1	RDVQKPYVVELEVLDGHEPDGGQR	RDVQKPYVVELEVLDGHEPDGGQR	4	RDVQKPYVVELEVLDGHEPDGGQR4	10985.1	15635	13058.3
Q4FZT0	Q4FZT0	STML2_RAT	Stoml2	Stomatin-like protein 2, mitochondrial	1	RDVQTTDTSIEELGR	RDVQTTDTSIEELGR	3	RDVQTTDTSIEELGR3	5479.43	10735.3	1645.94
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	RDVTQLDPNK	RDVTQLDPNK	2	RDVTQLDPNK2	77387.6	80226.8	74414.8
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	RDVTQLDPNK	RDVTQLDPNK	3	RDVTQLDPNK3	19572.3	24257.7	17019.1
Q5FWU0	Q5FWU0	Q5FWU0_RAT	Wasf2	Wiskott-Aldrich syndrome protein family member	1	RDVVGNDVATILSR	RDVVGNDVATILSR	3	RDVVGNDVATILSR3	255162	274050	300111
P10888	P10888	COX41_RAT	Cox4i1	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial	1	RDYPLPDVAHVK	RDYPLPDVAHVK	3	RDYPLPDVAHVK3	29632.3	20683.8	25696.1
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	RDYVDEQTGDVPVK	RDYVDEQTGDVPVK	2	RDYVDEQTGDVPVK2	3771.86	6485.16	5060.64
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	RDYVDEQTGDVPVK	RDYVDEQTGDVPVK	3	RDYVDEQTGDVPVK3	20525.1	18434.8	9953.29
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	REAAEQWLDNCK	REAAEQWLDNC(UniMod:4)K	3	REAAEQWLDNC(UniMod:4)K3	17166.7	11350.7	11870.6
A0A8I5ZWI8	A0A8I5ZWI8	A0A8I5ZWI8_RAT	Dnajc19	DnaJ heat shock protein family (Hsp40) member C19	1	REAALILGVSPTANK	REAALILGVSPTANK	3	REAALILGVSPTANK3	14765.1	19533.7	15932.5
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	READDLEQWITEK	READDLEQWITEK	2	READDLEQWITEK2	1743.39	3226.27	3428.15
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	READDLEQWITEK	READDLEQWITEK	3	READDLEQWITEK3	60128.4	74398.6	54693.5
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	READSSGGGPTATAGPPAAAEEAQRPR	READSSGGGPTATAGPPAAAEEAQRPR	4	READSSGGGPTATAGPPAAAEEAQRPR4	123661	108734	126077
P83888	P83888	TBG1_RAT	Tubg1	Tubulin gamma-1 chain	1	REAFMEQFR	REAFMEQFR	3	REAFMEQFR3	14884.5	14401.9	12879.8
O70540	O70540	MADCA_RAT	Madcam1	Mucosal addressin cell adhesion molecule 1	1	REAGAQAWLSVLPLGPIPEGWFQCR	REAGAQAWLSVLPLGPIPEGWFQC(UniMod:4)R	3	REAGAQAWLSVLPLGPIPEGWFQC(UniMod:4)R3	3738.87	3484.81	3557.69
D3ZAQ0	D3ZAQ0	D3ZAQ0_RAT	Fundc2	FUN14 domain containing 2	1	REALDLAEFTR	REALDLAEFTR	3	REALDLAEFTR3	35834.8	25640.3	35424
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	REASHVLEVK	REASHVLEVK	3	REASHVLEVK3	5179.46	8754.5	6747.63
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	REATADDLIK	REATADDLIK	2	REATADDLIK2	8103.6	10856.3	10899
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	REATLPPVSPPK	REATLPPVSPPK	3	REATLPPVSPPK3	67392.9	54267.6	87661.2
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	RECFGACLFTCYDLLRPDVVLETAWR	REC(UniMod:4)FGAC(UniMod:4)LFTC(UniMod:4)YDLLRPDVVLETAWR	4	REC(UniMod:4)FGAC(UniMod:4)LFTC(UniMod:4)YDLLRPDVVLETAWR4	42554.1	33895.6	22035
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	RECLCCFQHIDFVTAIAFHPR	REC(UniMod:4)LC(UniMod:4)C(UniMod:4)FQHIDFVTAIAFHPR	4	REC(UniMod:4)LC(UniMod:4)C(UniMod:4)FQHIDFVTAIAFHPR4	4151.3	4642.86	2150.64
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	RECYFDTAAPDACDNILAR	REC(UniMod:4)YFDTAAPDAC(UniMod:4)DNILAR	3	REC(UniMod:4)YFDTAAPDAC(UniMod:4)DNILAR3	9012.84	15447.5	22403.1
P16573	P16573	CEAM1_RAT	Ceacam1	Carcinoembryonic antigen-related cell adhesion molecule 1	1	REDAGDYQCEISNPVSFR	REDAGDYQC(UniMod:4)EISNPVSFR	3	REDAGDYQC(UniMod:4)EISNPVSFR3	179456	179768	228654
Q08013	Q08013	SSRG_RAT	Ssr3	Translocon-associated protein subunit gamma	1	REDAVSK	REDAVSK	2	REDAVSK2		3937.34	
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	REDCLPYANTVLQCLDGCR	REDC(UniMod:4)LPYANTVLQC(UniMod:4)LDGC(UniMod:4)R	3	REDC(UniMod:4)LPYANTVLQC(UniMod:4)LDGC(UniMod:4)R3	26859	26856.2	26352
Q62848	Q62848	ARFG1_RAT	Arfgap1	ADP-ribosylation factor GTPase-activating protein 1	1	REDDFLNSAMSSLYSGWSSFTTGASK	REDDFLNSAMSSLYSGWSSFTTGASK	3	REDDFLNSAMSSLYSGWSSFTTGASK3	8817.1	5690.08	13689.5
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	REDDIAK	REDDIAK	2	REDDIAK2			88190.1
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	REDEEESLNEVGYDDIGGCR	REDEEESLNEVGYDDIGGC(UniMod:4)R	3	REDEEESLNEVGYDDIGGC(UniMod:4)R3	290104	306985	335423
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	REDEEESLNEVGYDDIGGCRK	REDEEESLNEVGYDDIGGC(UniMod:4)RK	3	REDEEESLNEVGYDDIGGC(UniMod:4)RK3	125309	87162.5	122290
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	REDEEESLNEVGYDDIGGCRK	REDEEESLNEVGYDDIGGC(UniMod:4)RK	4	REDEEESLNEVGYDDIGGC(UniMod:4)RK4	453369	452761	511008
Q642G4	Q642G4	PEX14_RAT	Pex14	Peroxisomal membrane protein PEX14	1	REDEEGEEDEDDDVSHVDEEDVLGVQR	REDEEGEEDEDDDVSHVDEEDVLGVQR	4	REDEEGEEDEDDDVSHVDEEDVLGVQR4	12324.7	10118.7	13862.8
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	REDEFVDLGDV	REDEFVDLGDV	2	REDEFVDLGDV2	23382.1	20956.1	21833.2
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	REDFDVEPADSEGNCHDSLTFAAK	REDFDVEPADSEGNC(UniMod:4)HDSLTFAAK	3	REDFDVEPADSEGNC(UniMod:4)HDSLTFAAK3	406806	409095	403623
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	REDFDVEPADSEGNCHDSLTFAAK	REDFDVEPADSEGNC(UniMod:4)HDSLTFAAK	4	REDFDVEPADSEGNC(UniMod:4)HDSLTFAAK4	5.49851e+06	6.05227e+06	5.81896e+06
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	REDHPPLLDR	REDHPPLLDR	2	REDHPPLLDR2	132661	119937	79115.5
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	REDHPPLLDR	REDHPPLLDR	3	REDHPPLLDR3	44771.6	53899	1.24583e+07
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	REDHPPLLDRR	REDHPPLLDRR	2	REDHPPLLDRR2	24909.4	38279.2	24880.2
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	REDHPPLLDRR	REDHPPLLDRR	3	REDHPPLLDRR3	1.1402e+06	1.66643e+06	1.34605e+06
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	REDIVDTMVFKPSDVLLVHFR	REDIVDTMVFKPSDVLLVHFR	4	REDIVDTMVFKPSDVLLVHFR4	14015.8	11344.9	15326.6
A0A8J8YFS5	A0A8J8YFS5	A0A8J8YFS5_RAT	Hars1	Histidine--tRNA ligase, cytoplasmic	1	REDLVEEIR	REDLVEEIR	3	REDLVEEIR3	18017.3	14100.9	14365.3
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	REDLVVAPAGVTLK	REDLVVAPAGVTLK	3	REDLVVAPAGVTLK3	81411.1	94437.5	91084.6
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	REDMAPHIYAVAQTAYR	REDMAPHIYAVAQTAYR	3	REDMAPHIYAVAQTAYR3	4415.16	10448.9	6106.75
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	REDMAPHIYAVAQTAYR	REDMAPHIYAVAQTAYR	4	REDMAPHIYAVAQTAYR4	8304.09	9334.83	9836.17
Q5XIM5	Q5XIM5	CDV3_RAT	Cdv3	Protein CDV3 homolog	1	REDPGDNWEEGGGGSGAEK	REDPGDNWEEGGGGSGAEK	3	REDPGDNWEEGGGGSGAEK3	13613	14679.9	18822.8
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	REDPTFQALEDFGR	REDPTFQALEDFGR	3	REDPTFQALEDFGR3	13507.9	14649.7	20483.7
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	REDRPVSFYQLGSSQFQPNAVSLAR	REDRPVSFYQLGSSQFQPNAVSLAR	4	REDRPVSFYQLGSSQFQPNAVSLAR4	17628.5	27589.6	14468.5
Q5M7A4	Q5M7A4	UBA5_RAT	Uba5	Ubiquitin-like modifier-activating enzyme 5	1	REDSVSEVTVEDSGESLEDLMAR	REDSVSEVTVEDSGESLEDLMAR	3	REDSVSEVTVEDSGESLEDLMAR3	42708.8	42845.9	30268.5
G3V6U9	G3V6U9	SETD3_RAT	Setd3	Actin-histidine N-methyltransferase	1	REDYFPDLMK	REDYFPDLMK	2	REDYFPDLMK2	6804.14	5068.29	4094.11
G3V6U9	G3V6U9	SETD3_RAT	Setd3	Actin-histidine N-methyltransferase	1	REDYFPDLMK	REDYFPDLMK	3	REDYFPDLMK3	33118.8	45257.6	28171.3
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	REEACYVLSK	REEAC(UniMod:4)YVLSK	2	REEAC(UniMod:4)YVLSK2	4890.3	9259.04	2695.98
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	REEACYVLSK	REEAC(UniMod:4)YVLSK	3	REEAC(UniMod:4)YVLSK3	4244.74	7372.3	10868.3
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	REEAIPLPCMCVTR	REEAIPLPC(UniMod:4)MC(UniMod:4)VTR	3	REEAIPLPC(UniMod:4)MC(UniMod:4)VTR3	197739	247891	230659
P18292	P18292	THRB_RAT	F2	Prothrombin	1	REECSIPVCGQEGR	REEC(UniMod:4)SIPVC(UniMod:4)GQEGR	2	REEC(UniMod:4)SIPVC(UniMod:4)GQEGR2	599677	652322	609064
P18292	P18292	THRB_RAT	F2	Prothrombin	1	REECSIPVCGQEGR	REEC(UniMod:4)SIPVC(UniMod:4)GQEGR	3	REEC(UniMod:4)SIPVC(UniMod:4)GQEGR3	109744	111253	119149
P18292	P18292	THRB_RAT	F2	Prothrombin	1	REECSIPVCGQEGR	REEC(UniMod:4)SIPVC(UniMod:4)GQEGR	4	REEC(UniMod:4)SIPVC(UniMod:4)GQEGR4	148207	180018	180462
P18292	P18292	THRB_RAT	F2	Prothrombin	1	REECSIPVCGQEGRTTVK	REEC(UniMod:4)SIPVC(UniMod:4)GQEGRTTVK	4	REEC(UniMod:4)SIPVC(UniMod:4)GQEGRTTVK4	33455.7	45729.5	52927.7
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	REEDSDLMALGPR	REEDSDLMALGPR	3	REEDSDLMALGPR3	37602.3	29638	32747.8
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	REEEEDFIR	REEEEDFIR	2	REEEEDFIR2	4932.79	2917.58	3697.12
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	REEEEDFIR	REEEEDFIR	3	REEEEDFIR3	10354.9	12424.8	11655.2
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	REEEEENVQSEWR	REEEEENVQSEWR	3	REEEEENVQSEWR3	8767.18	14105.8	17683.9
M0RC73	M0RC73	M0RC73_RAT	Naa16	N(alpha)-acetyltransferase 16, NatA auxiliary subunit	1	REEEEEVTSGHK	REEEEEVTSGHK	3	REEEEEVTSGHK3			3559.92
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	REEESSGLLPIDR	REEESSGLLPIDR	3	REEESSGLLPIDR3	12935.4	17665.7	24095.5
A0A8I6GAE6	A0A8I6GAE6	A0A8I6GAE6_RAT	Ddx19b	RNA helicase	1	REEETLDTIK	REEETLDTIK	3	REEETLDTIK3	1339.75	6581.07	2933.15
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	REEFIQK	REEFIQK	2	REEFIQK2	33779.3	34922	33571.3
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	REEFWLGLDNLSK	REEFWLGLDNLSK	2	REEFWLGLDNLSK2	15763.5	16619.8	14134.1
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	REEFWLGLDNLSK	REEFWLGLDNLSK	3	REEFWLGLDNLSK3	299780	412155	329499
O88902	O88902	PTN23_RAT	Ptpn23	Tyrosine-protein phosphatase non-receptor type 23 (Fragment)	1	REEGEAAEAGDQPEELR	REEGEAAEAGDQPEELR	3	REEGEAAEAGDQPEELR3	4028.61	2946.98	3182.3
Q3B7V5	Q3B7V5	Q3B7V5_RAT	Rab2b	RAB2B, member RAS oncogene family	1	REEGEAFAR	REEGEAFAR	2	REEGEAFAR2	4472.96		
D3ZQQ1	D3ZQQ1	D3ZQQ1_RAT	Aftph	Aftiphilin	1	REEHLSEEAVK	REEHLSEEAVK	3	REEHLSEEAVK3	11193.2	17796.2	
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	REEKETSPPDYR	REEKETSPPDYR	3	REEKETSPPDYR3	3366.42	10703.5	6825.04
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	REELITNWEQIR	REELITNWEQIR	3	REELITNWEQIR3	401746	483789	467350
P39032	F1M706;D4A1Q0;P39032;A0A8I6AG76;D3ZZ95	RL36_RAT	Rpl36	Large ribosomal subunit protein eL36	0	REELSNVLAAMR	REELSNVLAAMR	3	REELSNVLAAMR3	52648.9	59278.5	49625.3
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	REEMEQLFAEDQGGVTR	REEMEQLFAEDQGGVTR	3	REEMEQLFAEDQGGVTR3	15402.9	17140.8	16184.6
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	REEMHLEDSANFIK	REEMHLEDSANFIK	3	REEMHLEDSANFIK3	37711.1	36971.2	42130.7
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	REEMHLEDSANFIK	REEMHLEDSANFIK	4	REEMHLEDSANFIK4	11786.3	23156.4	20679.1
P83953	Q56R16;P83953	IMA5_RAT	Kpna1	Importin subunit alpha-5	0	REEQLFK	REEQLFK	2	REEQLFK2	60784	48712.8	34326.1
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	REETASEESEGKVPTVR	REETASEESEGKVPTVR	3	REETASEESEGKVPTVR3	1307.23	569.656	
Q9Z1W6	Q9Z1W6	LYRIC_RAT	Mtdh	Protein LYRIC	1	REEVTPPTPAPEDPAQLK	REEVTPPTPAPEDPAQLK	3	REEVTPPTPAPEDPAQLK3	61905	52935.1	72051
Q8K4V4	Q8K4V4	SNX27_RAT	Snx27	Sorting nexin-27	1	REFANFTFPR	REFANFTFPR	3	REFANFTFPR3	14047.7	7486.36	10426.7
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	REFIQEPAK	REFIQEPAK	2	REFIQEPAK2	13438.1	20446	17542.2
D4ADQ1	D4ADQ1	D4ADQ1_RAT	Rrm2b	Ribonucleotide reductase regulatory TP53 inducible subunit M2B	1	REFLFNAIETMPYVK	REFLFNAIETMPYVK	3	REFLFNAIETMPYVK3	23014.5	11233.9	15997.8
A0A0G2K542	A0A0G2K542	A0A0G2K542_RAT	Ugp2	UTP--glucose-1-phosphate uridylyltransferase	1	REFPTVPLVK	REFPTVPLVK	2	REFPTVPLVK2	2314.85		2459.25
A0A0G2K542	A0A0G2K542	A0A0G2K542_RAT	Ugp2	UTP--glucose-1-phosphate uridylyltransferase	1	REFPTVPLVK	REFPTVPLVK	3	REFPTVPLVK3	14123.3	9043.76	8332.98
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	REFQLDLDEIENDNGTVR	REFQLDLDEIENDNGTVR	3	REFQLDLDEIENDNGTVR3	3644.62	1913.46	4343.22
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	REGADAAAK	REGADAAAK	2	REGADAAAK2			849.636
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	REGFCQLLQQMK	REGFC(UniMod:4)QLLQQMK	3	REGFC(UniMod:4)QLLQQMK3	52123.7	66650.7	42235.9
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	REGFIPSNYVAK	REGFIPSNYVAK	2	REGFIPSNYVAK2	32322.3	36475.8	32394.1
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	REGFIPSNYVAK	REGFIPSNYVAK	3	REGFIPSNYVAK3	1.06492e+06	1.07108e+06	1.19827e+06
F1LPV0	F1LPV0	F1LPV0_RAT	Nars1	asparagine--tRNA ligase	1	REGIDPAPYYWYTDQR	REGIDPAPYYWYTDQR	3	REGIDPAPYYWYTDQR3	25460.8	35807.1	20467
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	REGIHASEIK	REGIHASEIK	3	REGIHASEIK3	24516.3	24601.8	36606.6
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	REGITAIGGTSSISSEGTQHSYSEEEK	REGITAIGGTSSISSEGTQHSYSEEEK	4	REGITAIGGTSSISSEGTQHSYSEEEK4	42058	37328.6	62017.8
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	REGITPWASFK	REGITPWASFK	3	REGITPWASFK3	22071.2	23299.4	13186.1
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	REGLLHSSHISEELTTTTEIMMGR	REGLLHSSHISEELTTTTEIMMGR	3	REGLLHSSHISEELTTTTEIMMGR3	22728.9	25489.6	33312.8
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	REGLLHSSHISEELTTTTEIMMGR	REGLLHSSHISEELTTTTEIMMGR	4	REGLLHSSHISEELTTTTEIMMGR4	99103.6	114686	120072
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	REGPNFITMEGTVSDHIER	REGPNFITMEGTVSDHIER	4	REGPNFITMEGTVSDHIER4	24960.5		23648.9
D4ABX9	D4ABX9	D4ABX9_RAT	Emc6	ER membrane protein complex subunit 6	1	REGPPFISEAAVR	REGPPFISEAAVR	3	REGPPFISEAAVR3	34725.3	39199.6	26476.2
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	REGTDSYAITFR	REGTDSYAITFR	3	REGTDSYAITFR3	44017.3	51826	63733.9
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	REGTGTETAMIGDR	REGTGTETAMIGDR	3	REGTGTETAMIGDR3	12623.1	4678.08	7554.96
P83941	A0A0G2K2A0;P83941;A0A096MIY6;A0A8I6AKW3	ELOC_RAT	Eloc	Elongin-C	0	REHALTSGTIK	REHALTSGTIK	3	REHALTSGTIK3	271626	287133	325643
Q5RJQ4	Q5RJQ4	SIR2_RAT	Sirt2	NAD-dependent protein deacetylase sirtuin-2	1	REHANIDAQSGSQASNPSATVSPR	REHANIDAQSGSQASNPSATVSPR	4	REHANIDAQSGSQASNPSATVSPR4	3992.59	5550.42	4230.57
Q9QZA6	Q9QZA6	CD151_RAT	Cd151	CD151 antigen	1	REHASNIYK	REHASNIYK	2	REHASNIYK2			3002.63
Q9Z2L0	Q9Z2L0;A0A8I6GHL9	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	0	REHINLGCDVDFDIAGPSIR	REHINLGC(UniMod:4)DVDFDIAGPSIR	3	REHINLGC(UniMod:4)DVDFDIAGPSIR3	79237.5	86483.7	82583.7
Q9Z2L0	Q9Z2L0;A0A8I6GHL9	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	0	REHINLGCDVDFDIAGPSIR	REHINLGC(UniMod:4)DVDFDIAGPSIR	4	REHINLGC(UniMod:4)DVDFDIAGPSIR4	206613	198560	191167
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	REHLTDEDK	REHLTDEDK	3	REHLTDEDK3			17530
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	REHLTDEDKLNNAK	REHLTDEDKLNNAK	3	REHLTDEDKLNNAK3	5699.62	5022.75	2924.47
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	REHLTDEDKLNNAK	REHLTDEDKLNNAK	4	REHLTDEDKLNNAK4	71140.1	45076.7	51889.8
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	REHPSLDTK	REHPSLDTK	2	REHPSLDTK2			14085
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	REHTFSSLLCASDAELSETLSLLLPPTVVK	REHTFSSLLC(UniMod:4)ASDAELSETLSLLLPPTVVK	4	REHTFSSLLC(UniMod:4)ASDAELSETLSLLLPPTVVK4	405494	99602.9	82570.3
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	REIAGATPYITAAEEK	REIAGATPYITAAEEK	3	REIAGATPYITAAEEK3	67075.2	64227.5	70788.5
P30836	P30836	LYAM1_RAT	Sell	L-selectin	1	REIEYLEK	REIEYLEK	2	REIEYLEK2	5075.04	5656.56	5348.28
Q9QZM5	A0A8I5ZLD3;Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	0	REIGILTTNK	REIGILTTNK	2	REIGILTTNK2	3801.94	3340.66	4829.11
Q9QZM5	A0A8I5ZLD3;Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	0	REIGILTTNK	REIGILTTNK	3	REIGILTTNK3	22861.6	19351.9	21413.9
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	REILGTCK	REILGTC(UniMod:4)K	2	REILGTC(UniMod:4)K2	24089.2	26210.2	23465.3
Q63615	Q63615	VP33A_RAT	Vps33a	Vacuolar protein sorting-associated protein 33A	1	REILQTYGYEHILTLNNLEK	REILQTYGYEHILTLNNLEK	4	REILQTYGYEHILTLNNLEK4	2420.38	5349.78	7084.23
M0R6Q0	M0R6Q0	M0R6Q0_RAT	Casd1	CAS1 domain containing 1	1	REINHYFSVR	REINHYFSVR	3	REINHYFSVR3	3614.01	6472.15	1956.56
Q6P9T8	Q6P9T8;B4F7C2	TBB4B_RAT	Tubb4b	Tubulin beta-4B chain	0	REIVHLQAGQCGNQIGAK	REIVHLQAGQC(UniMod:4)GNQIGAK	4	REIVHLQAGQC(UniMod:4)GNQIGAK4	3809.57	5417	972.103
F7FLB2	F7FLB2	F7FLB2_RAT	Pgm2	phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	1	RELDELVGAIEEHFFQPQK	RELDELVGAIEEHFFQPQK	4	RELDELVGAIEEHFFQPQK4	13484.9	14970.3	19544.6
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	RELEALNK	RELEALNK	2	RELEALNK2	9467.93	24332.2	15894.2
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	RELEHNAEETYGENPDDK	RELEHNAEETYGENPDDK	3	RELEHNAEETYGENPDDK3	4176.1	4520.77	3298.82
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	RELEHNAEETYGENPDDKNNDVEEQGVPNR	RELEHNAEETYGENPDDKNNDVEEQGVPNR	4	RELEHNAEETYGENPDDKNNDVEEQGVPNR4		3352.79	6492.82
F7F5Q9	F7F5Q9	F7F5Q9_RAT	Hcls1	Hematopoietic cell specific Lyn substrate 1	1	RELESGPK	RELESGPK	2	RELESGPK2			17235.6
Q3KRE2	Q3KRE2	Q3KRE2_RAT	Mettl7a	Methyltransferase like 7A	1	RELFSNLQEFAGPSGK	RELFSNLQEFAGPSGK	3	RELFSNLQEFAGPSGK3	19094.1	25415.7	19256.3
F1LU14	F1LU14	F1LU14_RAT	Snx32	Sorting nexin	1	RELMDFQSR	RELMDFQSR	3	RELMDFQSR3	8659.15	8177.74	5662.12
P10683	P10683	GALA_RAT	Gal	Galanin peptides	1	RELPLEVEEGR	RELPLEVEEGR	3	RELPLEVEEGR3	7839.69	11215.3	13302.7
Q9Z1P2	Q9QXQ0;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	RELPPDQAEYCIAR	RELPPDQAEYC(UniMod:4)IAR	3	RELPPDQAEYC(UniMod:4)IAR3	119810	149887	131761
O08561	O08561	PI4KB_RAT	Pi4kb	Phosphatidylinositol 4-kinase beta	1	RELPTLSPAPDTGLSPSK	RELPTLSPAPDTGLSPSK	3	RELPTLSPAPDTGLSPSK3	5100.41	7774.35	9325.23
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	RELQELVQYPVEHPDK	RELQELVQYPVEHPDK	3	RELQELVQYPVEHPDK3	783419	712570	661267
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	RELQELVQYPVEHPDK	RELQELVQYPVEHPDK	4	RELQELVQYPVEHPDK4	1.1037e+06	1.14313e+06	1.17161e+06
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	RELQELVQYPVEHPDKFLK	RELQELVQYPVEHPDKFLK	3	RELQELVQYPVEHPDKFLK3	11951.4	19495.3	11914
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	RELQELVQYPVEHPDKFLK	RELQELVQYPVEHPDKFLK	4	RELQELVQYPVEHPDKFLK4	202404	257412	320213
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	RELQNLIGAVNQLNVLTK	RELQNLIGAVNQLNVLTK	3	RELQNLIGAVNQLNVLTK3	42539.6	44133.6	36139.1
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	RELQQAVLQMEQR	RELQQAVLQMEQR	3	RELQQAVLQMEQR3	121543	150727	139476
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	RELTELR	RELTELR	2	RELTELR2	13457.1	3540.66	7938.48
Q6VV72	Q6VV72;A0A8I6A8I7	IF1A_RAT	Eif1a	Eukaryotic translation initiation factor 1A	0	RELVFKEDGQEYAQVIK	RELVFKEDGQEYAQVIK	3	RELVFKEDGQEYAQVIK3	5817.32		4471.01
Q6VV72	Q6VV72;A0A8I6A8I7	IF1A_RAT	Eif1a	Eukaryotic translation initiation factor 1A	0	RELVFKEDGQEYAQVIK	RELVFKEDGQEYAQVIK	4	RELVFKEDGQEYAQVIK4	12502.4	17714.9	19467.1
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	REMDGYR	REMDGYR	2	REMDGYR2	11636.3	16695.5	10013.3
Q4KM73	Q4KM73	KCY_RAT	Cmpk1	UMP-CMP kinase	1	REMDQTMAANAQK	REMDQTMAANAQK	3	REMDQTMAANAQK3	21414.3	15091	18142.5
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	RENEVLEAWK	RENEVLEAWK	2	RENEVLEAWK2	104685	117995	97854
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	RENEVLEAWK	RENEVLEAWK	3	RENEVLEAWK3	855293	974380	810759
Q5U2N0	Q5U2N0	PYRG2_RAT	Ctps2	CTP synthase 2	1	RENFYNIHVSLVPQPSATGEQK	RENFYNIHVSLVPQPSATGEQK	3	RENFYNIHVSLVPQPSATGEQK3	2999.46	4402.94	5555.56
Q5U2N0	Q5U2N0	PYRG2_RAT	Ctps2	CTP synthase 2	1	RENFYNIHVSLVPQPSATGEQK	RENFYNIHVSLVPQPSATGEQK	4	RENFYNIHVSLVPQPSATGEQK4	12388.2	10985.2	6438.02
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	RENIVGDAMEVLR	RENIVGDAMEVLR	3	RENIVGDAMEVLR3	8958.16	4038.89	5378.4
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	RENPLLPEEEEQR	RENPLLPEEEEQR	3	RENPLLPEEEEQR3	84754.1	76391.1	77840.9
B2RYD7	B2RYD7	B2RYD7_RAT	Stt3b	dolichyl-diphosphooligosaccharide--protein glycotransferase	1	RENPPVEDSSDEDDRR	RENPPVEDSSDEDDRR	4	RENPPVEDSSDEDDRR4			4722.5
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	RENTNEIYSGK	RENTNEIYSGK	2	RENTNEIYSGK2	107049	111527	107115
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	RENTNEIYSGK	RENTNEIYSGK	3	RENTNEIYSGK3	239940	278444	312167
Q06000	Q06000	LIPL_RAT	Lpl	Lipoprotein lipase	1	REPDSNVIVVDWLYR	REPDSNVIVVDWLYR	3	REPDSNVIVVDWLYR3	38004.2	53067.1	30155.1
Q5XI07	Q5XI07	LPP_RAT	Lpp	Lipoma-preferred partner homolog	1	REPGYAAPGAGNQNQPGMYSVSGPK	REPGYAAPGAGNQNQPGMYSVSGPK	3	REPGYAAPGAGNQNQPGMYSVSGPK3	49473.1	56994	61712.4
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	REPIPSLEAIYLLSPTEK	REPIPSLEAIYLLSPTEK	3	REPIPSLEAIYLLSPTEK3	234099	235379	246629
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	REPLPSLEAVYLITPSEK	REPLPSLEAVYLITPSEK	3	REPLPSLEAVYLITPSEK3	31908.4	43768.1	32254.8
Q5PQP2	Q5PQP2	RCAS1_RAT	Ebag9	Receptor-binding cancer antigen expressed on SiSo cells	1	REPLSFGVPDGSTGFSSR	REPLSFGVPDGSTGFSSR	3	REPLSFGVPDGSTGFSSR3	44440.5	39945.5	39829.6
Q562B5	Q562B5	PGAM5_RAT	Pgam5	Serine/threonine-protein phosphatase PGAM5, mitochondrial	1	REPLSLINLK	REPLSLINLK	3	REPLSLINLK3	7574.39	6370.96	10427.7
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	REPMNIYNLIAIIR	REPMNIYNLIAIIR	3	REPMNIYNLIAIIR3	15596.6	26139.2	15385.7
B0BNH1	B0BNH1	B0BNH1_RAT	Gnptg	N-acetylglucosamine-1-phosphate transferase subunit gamma	1	REPSAVSGPPHLFR	REPSAVSGPPHLFR	3	REPSAVSGPPHLFR3	65563.8	34287.1	29831.2
B0BNH1	B0BNH1	B0BNH1_RAT	Gnptg	N-acetylglucosamine-1-phosphate transferase subunit gamma	1	REPSAVSGPPHLFR	REPSAVSGPPHLFR	4	REPSAVSGPPHLFR4	76910.9	45402.2	60521.4
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	REPVSLEEWTK	REPVSLEEWTK	2	REPVSLEEWTK2	4818.03	8434.47	4699.66
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	REPVSLEEWTK	REPVSLEEWTK	3	REPVSLEEWTK3	9924.91	18736.5	6195.83
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	REPWLLASQYQDAIR	REPWLLASQYQDAIR	3	REPWLLASQYQDAIR3	112378	135228	122914
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	REPWLLASQYQDAIRDALFQR	REPWLLASQYQDAIRDALFQR	4	REPWLLASQYQDAIRDALFQR4	9822.4	9574.66	
Q9Z1K9	Q9Z1K9	ADA17_RAT	Adam17	Disintegrin and metalloproteinase domain-containing protein 17	1	REQELESCACADTDNSCK	REQELESC(UniMod:4)AC(UniMod:4)ADTDNSC(UniMod:4)K	3	REQELESC(UniMod:4)AC(UniMod:4)ADTDNSC(UniMod:4)K3	4053.66	726.391	3955.93
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	REQELLNQYVNTVNDR	REQELLNQYVNTVNDR	3	REQELLNQYVNTVNDR3	12611.7	7567.43	3898.11
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	REQEMFFR	REQEMFFR	2	REQEMFFR2	1645.71	4053.76	1731.18
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	REQEMFFR	REQEMFFR	3	REQEMFFR3	13226.4	14207.9	12948.3
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	REQEVSILK	REQEVSILK	2	REQEVSILK2	4.81621e+06	5.57248e+06	4.96546e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	REQEVSILKK	REQEVSILKK	2	REQEVSILKK2	50102.3	77353.7	66398.1
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	REQEVSILKK	REQEVSILKK	3	REQEVSILKK3	3.20839e+06	4.76428e+06	4.84688e+06
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	REQGNIEEAVR	REQGNIEEAVR	3	REQGNIEEAVR3	7440.44	14942.5	15142.9
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	REQGSSGLGSGSSGGGGSSSGLGSGYIGR	REQGSSGLGSGSSGGGGSSSGLGSGYIGR	3	REQGSSGLGSGSSGGGGSSSGLGSGYIGR3	14542.4	23743.6	13838.5
D3Z9L0	D3Z9L0	D3Z9L0_RAT	Agk	Acylglycerol kinase, mitochondrial	1	REQMLQSTSQ	REQMLQSTSQ	2	REQMLQSTSQ2	9262.02	10637	6950.36
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	REQQPSVTPGLGVMQVR	REQQPSVTPGLGVMQVR	3	REQQPSVTPGLGVMQVR3	8436.93	6136.6	10046
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	RESELIYVFK	RESELIYVFK	3	RESELIYVFK3	17366.3	15126.8	17227.4
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	RESGAAEQVDNK	RESGAAEQVDNK	3	RESGAAEQVDNK3			28862.6
F1LT49	F1LT49	F1LT49_RAT	Lrrc47	Leucine rich repeat containing 47	1	RESGEGEEEVADSAR	RESGEGEEEVADSAR	3	RESGEGEEEVADSAR3	5716.74	459.143	1429.01
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	RESPEVLLTLDILK	RESPEVLLTLDILK	3	RESPEVLLTLDILK3	85034.4	60851.2	38647.1
Q5I0D1	Q5I0D1	GLOD4_RAT	Glod4	Glyoxalase domain-containing protein 4	1	RESQSILTPLVSLDTPGK	RESQSILTPLVSLDTPGK	3	RESQSILTPLVSLDTPGK3	13396.3	8844.61	10916.6
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	RESTSPTLHSFHPLASPLPCDFHLLNLR	RESTSPTLHSFHPLASPLPC(UniMod:4)DFHLLNLR	4	RESTSPTLHSFHPLASPLPC(UniMod:4)DFHLLNLR4	4434.27	8387.22	5610.35
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	RESVASGDDRAEEDMDEALEK	RESVASGDDRAEEDMDEALEK	4	RESVASGDDRAEEDMDEALEK4	6349.19	14347.5	
P08650	P08650	CO5_RAT	C5	Complement C5	1	RESYAGVTLDPR	RESYAGVTLDPR	3	RESYAGVTLDPR3	512913	412182	341246
Q9ES54	Q9ES54	NPL4_RAT	Nploc4	Nuclear protein localization protein 4 homolog	1	RETAATFLKK	RETAATFLKK	3	RETAATFLKK3	2030.09		7117.79
O35876	O35876	SMN_RAT	Smn1	Survival motor neuron protein	1	RETCVVVYTGYGNK	RETC(UniMod:4)VVVYTGYGNK	3	RETC(UniMod:4)VVVYTGYGNK3	4839.83	5670.21	7005.19
P15473	P15473	IBP3_RAT	Igfbp3	Insulin-like growth factor-binding protein 3	1	RETEYGPCR	RETEYGPC(UniMod:4)R	3	RETEYGPC(UniMod:4)R3	63595	46094.1	60190.9
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	RETGVDLTK	RETGVDLTK	2	RETGVDLTK2	55480	29847.5	49480.1
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	RETLVEVLTK	RETLVEVLTK	2	RETLVEVLTK2	8917.46	7900.54	4713.83
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	RETLVEVLTK	RETLVEVLTK	3	RETLVEVLTK3	20651.9	24458.3	18983.1
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	RETVGQSLLQQTQMGDIWPGR	RETVGQSLLQQTQMGDIWPGR	3	RETVGQSLLQQTQMGDIWPGR3	257607	267396	260232
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	RETVGQSLLQQTQMGDIWPGRR	RETVGQSLLQQTQMGDIWPGRR	4	RETVGQSLLQQTQMGDIWPGRR4	130509	135420	150692
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	REVDEEDAALYR	REVDEEDAALYR	3	REVDEEDAALYR3	10410.5	14531.3	7138.15
Q6AXX6	Q6AXX6	PXL2A_RAT	Prxl2a	Peroxiredoxin-like 2A	1	REVEDFQPYFK	REVEDFQPYFK	2	REVEDFQPYFK2	2866.48	7604.85	4621.21
Q6AXX6	Q6AXX6	PXL2A_RAT	Prxl2a	Peroxiredoxin-like 2A	1	REVEDFQPYFK	REVEDFQPYFK	3	REVEDFQPYFK3	86552.2	81354	82963
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	REVENSEDPK	REVENSEDPK	3	REVENSEDPK3			17248.3
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	REVENSEDPKFR	REVENSEDPKFR	3	REVENSEDPKFR3	276951	239941	160459
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	REVGDYGQLHETEVLLK	REVGDYGQLHETEVLLK	3	REVGDYGQLHETEVLLK3	5166.68	4615.81	3671.57
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	REVGDYGQLHETEVLLK	REVGDYGQLHETEVLLK	4	REVGDYGQLHETEVLLK4	7180.72	11949.6	2169.15
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	REVLEALGEVMVNRPR	REVLEALGEVMVNRPR	4	REVLEALGEVMVNRPR4	82867.4	91809.3	65119.4
Q561S0	A0A1W2Q6F8;Q561S0	NDUAA_RAT	Ndufa10	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial	0	REVLNYTTVPVYLPEITIGAHQGSR	REVLNYTTVPVYLPEITIGAHQGSR	4	REVLNYTTVPVYLPEITIGAHQGSR4	19242.6	17543	1676.72
Q5XI83	Q5XI83	VP35L_RAT	Vps35l	VPS35 endosomal protein-sorting factor-like	1	REVNTVLADVIK	REVNTVLADVIK	3	REVNTVLADVIK3	10523.4	14168.5	11811.3
A0A0G2K762	A0A0G2K762	A0A0G2K762_RAT	Abcf2	ATP binding cassette subfamily F member 2	1	REVPIPEHIDIYHLTR	REVPIPEHIDIYHLTR	4	REVPIPEHIDIYHLTR4	43788	30574.3	11663
Q9QZK5	Q9QZK5	HTRA1_RAT	Htra1	Serine protease HTRA1	1	REVPVASGSGFIVSEDGLIVTNAHVVTNK	REVPVASGSGFIVSEDGLIVTNAHVVTNK	4	REVPVASGSGFIVSEDGLIVTNAHVVTNK4	4921.95	2991.62	3030.25
Q07969	Q07969	CD36_RAT	Cd36	Platelet glycoprotein 4	1	REVVLEEGTIAFK	REVVLEEGTIAFK	3	REVVLEEGTIAFK3	6326.66	5674.27	9939.53
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	REWHNLISEER	REWHNLISEER	3	REWHNLISEER3	12185.2	19081	14020.2
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	REWKPLEDR	REWKPLEDR	3	REWKPLEDR3	54087.7	46915.2	58022.7
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	REWLEVLEETKR	REWLEVLEETKR	3	REWLEVLEETKR3	12728.3	2273.93	4924.18
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	REWLEVLEETKR	REWLEVLEETKR	4	REWLEVLEETKR4	1258.9	3145.26	
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	REWNILCITDVVYNHTAANSK	REWNILC(UniMod:4)ITDVVYNHTAANSK	4	REWNILC(UniMod:4)ITDVVYNHTAANSK4		5576.32	3055.74
D3ZY71	D3ZY71	D3ZY71_RAT	Triap1	TP53 regulated inhibitor of apoptosis 1	1	REYDQCFNR	REYDQC(UniMod:4)FNR	3	REYDQC(UniMod:4)FNR3	11923.3	6427.79	13181.6
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	REYGPFCGK	REYGPFC(UniMod:4)GK	2	REYGPFC(UniMod:4)GK2	112009	118918	120795
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	REYLDLTASNNFYVDDFAR	REYLDLTASNNFYVDDFAR	3	REYLDLTASNNFYVDDFAR3	4277.22	6673.74	8638.36
A0A8I5ZPY8	D3ZV29;A0A8I5ZPY8;F1M7T1;A0A8I5Y7M6	A0A8I5ZPY8_RAT	Ndufb4	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4	0	REYLLQYNDPK	REYLLQYNDPK	3	REYLLQYNDPK3	41760.5	27615.6	37363.7
A0A8I5ZPY8	A0A8I5ZPY8;F1M7T1	A0A8I5ZPY8_RAT	Ndufb4	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4	0	REYLLQYNDPKR	REYLLQYNDPKR	3	REYLLQYNDPKR3	7719.3	3275.37	5883.58
A0A8I5ZPY8	A0A8I5ZPY8;F1M7T1	A0A8I5ZPY8_RAT	Ndufb4	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4	0	REYLLQYNDPKR	REYLLQYNDPKR	4	REYLLQYNDPKR4	19298.5	12920.4	17109.1
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	REYLLTQSIR	REYLLTQSIR	3	REYLLTQSIR3	9676.27		9560.38
P82471	P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	1	REYQLSDSTK	REYQLSDSTK	2	REYQLSDSTK2	1687.31		1366.71
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	REYYFAITMER	REYYFAITMER	3	REYYFAITMER3	33641.8	28437	24233.2
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	RFANHGFK	RFANHGFK	2	RFANHGFK2	5744.66	8341.57	
Q4FZU0	Q4FZU0	Q4FZU0_RAT	Acp6	Acid phosphatase 6, lysophosphatidic	1	RFAQLIEQR	RFAQLIEQR	3	RFAQLIEQR3	6046.8	6164.08	2792.58
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	RFASEMK	RFASEMK	2	RFASEMK2	33797.6	28024	24555.9
Q498T9	Q498T9;Q4V8I7	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	0	RFAVFLSEVSENK	RFAVFLSEVSENK	3	RFAVFLSEVSENK3	3330.64	6015.44	8287.14
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	RFCFDIEANER	RFC(UniMod:4)FDIEANER	3	RFC(UniMod:4)FDIEANER3	15954.7	9657.72	14609.2
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	RFCFLTCDAASYLGDNLR	RFC(UniMod:4)FLTC(UniMod:4)DAASYLGDNLR	3	RFC(UniMod:4)FLTC(UniMod:4)DAASYLGDNLR3	9604.47	9798.65	11207.7
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	RFCPEADSK	RFC(UniMod:4)PEADSK	2	RFC(UniMod:4)PEADSK2	14053	14935.2	16896.1
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	RFCPPPPQIPNAQVIETTVK	RFC(UniMod:4)PPPPQIPNAQVIETTVK	3	RFC(UniMod:4)PPPPQIPNAQVIETTVK3	203446	219677	198202
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	RFCPPPPQIPNAQVIETTVK	RFC(UniMod:4)PPPPQIPNAQVIETTVK	4	RFC(UniMod:4)PPPPQIPNAQVIETTVK4	5656.74	8408.45	13608.7
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	RFCPSTQGAK	RFC(UniMod:4)PSTQGAK	2	RFC(UniMod:4)PSTQGAK2	4791.51	3672.49	
Q6AYD3	Q6AYD3	PA2G4_RAT	Pa2g4	Proliferation-associated protein 2G4	1	RFDAMPFTLR	RFDAMPFTLR	3	RFDAMPFTLR3	13251.8	12741.8	14870.4
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	RFDAQTGADR	RFDAQTGADR	2	RFDAQTGADR2	8653.16	10967.4	
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	RFDAQTGADREVQR	RFDAQTGADREVQR	3	RFDAQTGADREVQR3	2747.5	3937.26	
P63018	P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	RFDDAVVQSDMK	RFDDAVVQSDMK	2	RFDDAVVQSDMK2	170635	159743	139842
P63018	P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	RFDDAVVQSDMK	RFDDAVVQSDMK	3	RFDDAVVQSDMK3	1.61364e+06	1.70416e+06	1.84075e+06
D3ZD11	D3ZD11	D3ZD11_RAT	Spcs2	Signal peptidase complex subunit 2	1	RFDDKYTLK	RFDDKYTLK	3	RFDDKYTLK3	19213.1	21425.7	19259.6
A0A0G2K350	A0A0G2K350	A0A0G2K350_RAT	Napg	NSF attachment protein gamma	1	RFDEAALSIQK	RFDEAALSIQK	3	RFDEAALSIQK3	35988.3	39061.2	41371
P47858	P47858	PFKAM_RAT	Pfkm	ATP-dependent 6-phosphofructokinase, muscle type	1	RFDEAIK	RFDEAIK	2	RFDEAIK2	23164.5	8744.29	30070.6
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	RFDEAIQLR	RFDEAIQLR	2	RFDEAIQLR2	3612.5		1911.48
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	RFDEAIQLR	RFDEAIQLR	3	RFDEAIQLR3	37516	38928.4	43256.4
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	RFDEAVK	RFDEAVK	2	RFDEAVK2	173120	175434	102801
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	RFDEDDDKSFR	RFDEDDDKSFR	3	RFDEDDDKSFR3	12993	16851	17663.4
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	RFDEILEASDGIMVAR	RFDEILEASDGIMVAR	2	RFDEILEASDGIMVAR2	12176.4	13979.6	5161.37
P11980	M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	RFDEILEASDGIMVAR	RFDEILEASDGIMVAR	3	RFDEILEASDGIMVAR3	92858.2	92912.5	124563
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	RFDESMQVFAK	RFDESMQVFAK	3	RFDESMQVFAK3		2713.05	
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	RFDFDYTTMHR	RFDFDYTTMHR	3	RFDFDYTTMHR3	54806	61323.6	54015.6
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	RFDFMGTCTYLLVGSCGQNAALPAFK	RFDFMGTC(UniMod:4)TYLLVGSC(UniMod:4)GQNAALPAFK	3	RFDFMGTC(UniMod:4)TYLLVGSC(UniMod:4)GQNAALPAFK3	49513.6	31302.9	50324.7
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	RFDFMGTCTYLLVGSCGQNAALPAFK	RFDFMGTC(UniMod:4)TYLLVGSC(UniMod:4)GQNAALPAFK	4	RFDFMGTC(UniMod:4)TYLLVGSC(UniMod:4)GQNAALPAFK4	4504.43	8496.53	
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	RFDGDELTTDER	RFDGDELTTDER	2	RFDGDELTTDER2	4696.88		
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	RFDGDELTTDER	RFDGDELTTDER	3	RFDGDELTTDER3	42259.3	45141	50625.8
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	RFDGYLNQGANNK	RFDGYLNQGANNK	3	RFDGYLNQGANNK3	31104.3	23679.9	21981.6
P97849	P97849	S27A1_RAT	Slc27a1	Long-chain fatty acid transport protein 1	1	RFDGYVSDSATNKK	RFDGYVSDSATNKK	3	RFDGYVSDSATNKK3	4428.51	6817.92	8762.94
D3ZR49	D3ZR49	D3ZR49_RAT	Man1a2	alpha-1,2-Mannosidase	1	RFDLGLEDVLIPHVDAGK	RFDLGLEDVLIPHVDAGK	4	RFDLGLEDVLIPHVDAGK4	9329.11	5803.57	3486.52
P53565	P53565;A0A8I5ZR58	CUX1_RAT	Cux1	Homeobox protein cut-like 1	0	RFDLQQLQR	RFDLQQLQR	3	RFDLQQLQR3	17205.4	16683.6	18494.4
D3Z841	D3Z841	D3Z841_RAT	Btnl10	Butyrophilin like 10	1	RFDQDPCILAQER	RFDQDPC(UniMod:4)ILAQER	3	RFDQDPC(UniMod:4)ILAQER3	10067.3	7362.76	10594.2
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	RFDSELSQAHEETQR	RFDSELSQAHEETQR	3	RFDSELSQAHEETQR3	3593.74	3917.25	4290.53
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	RFDTEEEFK	RFDTEEEFK	2	RFDTEEEFK2	6794.33	4319.63	9524.72
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	RFDTEEEFKK	RFDTEEEFKK	3	RFDTEEEFKK3	32183.5	29002	23845
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	RFDVLAPHLTK	RFDVLAPHLTK	3	RFDVLAPHLTK3	33882.7	24494.7	20059
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	RFDVSGYPTLK	RFDVSGYPTLK	2	RFDVSGYPTLK2	189490	221098	172509
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	RFDVSGYPTLK	RFDVSGYPTLK	3	RFDVSGYPTLK3	469461	544421	586301
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	RFDYDWER	RFDYDWER	2	RFDYDWER2	21216.8	32721.6	26269.5
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	RFDYDWER	RFDYDWER	3	RFDYDWER3	19200.3	20592.5	14493.9
Q5XIL2	Q5XIL2	P4K2B_RAT	Pi4k2b	Phosphatidylinositol 4-kinase type 2-beta	1	RFEAEPLPENIR	RFEAEPLPENIR	3	RFEAEPLPENIR3	4329.96	4718.61	5533.93
Q5XIL2	Q5XIL2	P4K2B_RAT	Pi4k2b	Phosphatidylinositol 4-kinase type 2-beta	1	RFEAEPLPENIRK	RFEAEPLPENIRK	3	RFEAEPLPENIRK3	5440.23	6460.04	6573.36
Q99M64	Q99M64	P4K2A_RAT	Pi4k2a	Phosphatidylinositol 4-kinase type 2-alpha	1	RFEAEPLPENTNR	RFEAEPLPENTNR	3	RFEAEPLPENTNR3	17545	14190.9	16248.8
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	RFEECISQSAVK	RFEEC(UniMod:4)ISQSAVK	3	RFEEC(UniMod:4)ISQSAVK3		16957.2	13013.4
Q5XIT9	Q5XIT9	MCCB_RAT	Mccc2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	1	RFEEEGNPYYSSAR	RFEEEGNPYYSSAR	3	RFEEEGNPYYSSAR3	35512.9	31767.9	46258.3
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	RFEEELAAR	RFEEELAAR	2	RFEEELAAR2	10044.4	13894.7	15272.8
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	RFEEGVGKPAK	RFEEGVGKPAK	3	RFEEGVGKPAK3	18544.1	18386	
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	RFEELTNLIR	RFEELTNLIR	3	RFEELTNLIR3	142328	146283	160001
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	RFEFIQDESGTGDK	RFEFIQDESGTGDK	3	RFEFIQDESGTGDK3	3771.65	4642.63	10105.9
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	RFEFIQDESGTGDKEFMGNQDNNSLK	RFEFIQDESGTGDKEFMGNQDNNSLK	4	RFEFIQDESGTGDKEFMGNQDNNSLK4	7579.36	5888.49	10046.3
Q9Z2G8	D4AEJ0;Q9Z2G8	NP1L1_RAT	Nap1l1	Nucleosome assembly protein 1-like 1	0	RFEIINAIYEPTEEECEWK	RFEIINAIYEPTEEEC(UniMod:4)EWK	3	RFEIINAIYEPTEEEC(UniMod:4)EWK3	10542.4	15854.7	7000.37
Q6AXS5	Q6AXS5	SERB1_RAT	Serbp1	SERPINE1 mRNA-binding protein 1	1	RFEKPLEEK	RFEKPLEEK	3	RFEKPLEEK3	39207.2	34953.6	34024.3
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	RFELLSR	RFELLSR	2	RFELLSR2	10570.5	9561.33	5489.65
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	RFELVHIDTK	RFELVHIDTK	3	RFELVHIDTK3	225296	214916	206266
Q811U3	Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	1	RFENAPDSAK	RFENAPDSAK	2	RFENAPDSAK2	2174.59	4530.51	3508.86
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	RFEPVPAQYVR	RFEPVPAQYVR	3	RFEPVPAQYVR3	180283	241719	215851
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	RFEQEINAK	RFEQEINAK	2	RFEQEINAK2	10509.6	11718	6440.05
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	RFEQEMLSK	RFEQEMLSK	2	RFEQEMLSK2	21416.7	24232.8	15199.6
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	RFEQEMLSK	RFEQEMLSK	3	RFEQEMLSK3	4242.26	5295.57	5753.39
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	RFEQLELR	RFEQLELR	2	RFEQLELR2	49459.8	55233.1	40566.3
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	RFFALDDFTICYFK	RFFALDDFTIC(UniMod:4)YFK	3	RFFALDDFTIC(UniMod:4)YFK3	4274.5	2263.92	6085.65
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	RFFEMVNTITEEK	RFFEMVNTITEEK	3	RFFEMVNTITEEK3	4911.4	15274.9	5653.43
Q68A21	Q68A21	PURB_RAT	Purb	Transcriptional activator protein Pur-beta	1	RFFFDVGCNK	RFFFDVGC(UniMod:4)NK	2	RFFFDVGC(UniMod:4)NK2	41730.5	49412.4	35491.7
Q68A21	Q68A21	PURB_RAT	Purb	Transcriptional activator protein Pur-beta	1	RFFFDVGCNK	RFFFDVGC(UniMod:4)NK	3	RFFFDVGC(UniMod:4)NK3	144100	161270	152838
P86252	P86252	PURA_RAT	Pura	Transcriptional activator protein Pur-alpha	1	RFFFDVGSNK	RFFFDVGSNK	2	RFFFDVGSNK2	72921.9	67801.9	67451.1
P86252	P86252	PURA_RAT	Pura	Transcriptional activator protein Pur-alpha	1	RFFFDVGSNK	RFFFDVGSNK	3	RFFFDVGSNK3	37132.2	32426.6	43361.7
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	RFFQLQMCEYLLK	RFFQLQMC(UniMod:4)EYLLK	3	RFFQLQMC(UniMod:4)EYLLK3	7138.73	6573.91	
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	RFGCFMK	RFGC(UniMod:4)FMK	2	RFGC(UniMod:4)FMK2	43027.9	38498.7	31895.8
D4A183	D4A183	D4A183_RAT	Vnn3	Vanin 3	1	RFGFTPVQER	RFGFTPVQER	3	RFGFTPVQER3	6208.64	6593.21	7750.03
B0BNI5	B0BNI5	OLFL3_RAT	Olfml3	Olfactomedin-like protein 3	1	RFGGSAGLWTK	RFGGSAGLWTK	3	RFGGSAGLWTK3	3970.27	10605.6	14812.2
P40112	P40112;A0A8I6A926	PSB3_RAT	Psmb3	Proteasome subunit beta type-3	0	RFGIQAQMVTTDFQK	RFGIQAQMVTTDFQK	3	RFGIQAQMVTTDFQK3	27580.9	32290.7	30107.8
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	RFGLEGCEVLIPALK	RFGLEGC(UniMod:4)EVLIPALK	2	RFGLEGC(UniMod:4)EVLIPALK2	9085.9	4787.53	7000.83
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	RFGLEGCEVLIPALK	RFGLEGC(UniMod:4)EVLIPALK	3	RFGLEGC(UniMod:4)EVLIPALK3	61321.1	53121.6	55372.1
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	RFGLKPYTSFQEFTGEK	RFGLKPYTSFQEFTGEK	3	RFGLKPYTSFQEFTGEK3	39504.9	34343.5	52564.5
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	RFGLKPYTSFQEFTGEK	RFGLKPYTSFQEFTGEK	4	RFGLKPYTSFQEFTGEK4	74463.8	84876.3	67679.9
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	RFGNWLK	RFGNWLK	2	RFGNWLK2	11659.2	6775.58	11891.4
D3ZGA5	D3ZGA5	D3ZGA5_RAT	Rilp	Rab interacting lysosomal protein	1	RFGPDAAAGLVPLVVR	RFGPDAAAGLVPLVVR	3	RFGPDAAAGLVPLVVR3	3154.17	5414.38	6214.9
Q769K2	Q769K2	NAPEP_RAT	Napepld	N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D	1	RFGPFDLAAIPIGAYEPR	RFGPFDLAAIPIGAYEPR	3	RFGPFDLAAIPIGAYEPR3		5072.55	10980.2
P40112	P40112;D3Z8J0	PSB3_RAT	Psmb3	Proteasome subunit beta type-3	0	RFGPYYTEPVIAGLDPK	RFGPYYTEPVIAGLDPK	2	RFGPYYTEPVIAGLDPK2	81170.1	85955.3	119062
P40112	P40112;D3Z8J0	PSB3_RAT	Psmb3	Proteasome subunit beta type-3	0	RFGPYYTEPVIAGLDPK	RFGPYYTEPVIAGLDPK	3	RFGPYYTEPVIAGLDPK3	973473	1.10026e+06	1.16533e+06
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	RFGTVLEALEK	RFGTVLEALEK	2	RFGTVLEALEK2	6298.1	6876.12	6387.32
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	RFGTVLEALEK	RFGTVLEALEK	3	RFGTVLEALEK3	43767.6	53187.5	49783.4
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	RFGVFLSEVSENK	RFGVFLSEVSENK	3	RFGVFLSEVSENK3	3517.32	6728.43	7892.39
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	RFGVPVIADGGIQNVGHIAK	RFGVPVIADGGIQNVGHIAK	3	RFGVPVIADGGIQNVGHIAK3	10445.2	6845.61	7413.25
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	RFGVPVIADGGIQNVGHIAK	RFGVPVIADGGIQNVGHIAK	4	RFGVPVIADGGIQNVGHIAK4	12726.9	21741.7	23157.7
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	RFHATVSFDTDTGLK	RFHATVSFDTDTGLK	3	RFHATVSFDTDTGLK3	7944.01	15376.2	12099.6
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	RFHATVSFDTDTGLK	RFHATVSFDTDTGLK	4	RFHATVSFDTDTGLK4	3641.8	11528	4823.6
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	RFHMFDEDEK	RFHMFDEDEK	2	RFHMFDEDEK2	2898.97	4322.43	
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	RFHMFDEDEK	RFHMFDEDEK	3	RFHMFDEDEK3	28589.9	32308	27279.2
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	RFHMFDEDEKGFITIVDVQR	RFHMFDEDEKGFITIVDVQR	4	RFHMFDEDEKGFITIVDVQR4	14282.6	16536.4	12715.5
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	RFHPDHFTCTFCLR	RFHPDHFTC(UniMod:4)TFC(UniMod:4)LR	4	RFHPDHFTC(UniMod:4)TFC(UniMod:4)LR4	7852.87	2796.6	3952.36
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	RFHPDHFTCTFCLRPLTK	RFHPDHFTC(UniMod:4)TFC(UniMod:4)LRPLTK	4	RFHPDHFTC(UniMod:4)TFC(UniMod:4)LRPLTK4	9993.73	18041.1	9981.2
A0A0G2K4S7	A0A0G2K4S7	A0A0G2K4S7_RAT	Usp45	Ubiquitin carboxyl-terminal hydrolase	1	RFHQAGLSLR	RFHQAGLSLR	3	RFHQAGLSLR3	6479.34	6071.01	5916.31
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	RFHSMDELVEHYK	RFHSMDELVEHYK	3	RFHSMDELVEHYK3	5673.32	4430.61	5628.34
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	RFHSMDELVEHYK	RFHSMDELVEHYK	4	RFHSMDELVEHYK4	20529.1	24895.9	19587.8
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	RFILNLPTFSVR	RFILNLPTFSVR	2	RFILNLPTFSVR2	8001.22	9051.31	12060.2
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	RFILNLPTFSVR	RFILNLPTFSVR	3	RFILNLPTFSVR3	387973	352793	460480
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	RFIPTSIFVKPQGR	RFIPTSIFVKPQGR	3	RFIPTSIFVKPQGR3	9484.89	3963.66	3061.02
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	RFIQEVVQSQQAAVTR	RFIQEVVQSQQAAVTR	3	RFIQEVVQSQQAAVTR3	13207.7	11806.7	12874.2
P01026	P01026	CO3_RAT	C3	Complement C3	1	RFISHVK	RFISHVK	2	RFISHVK2	55272		40083.2
Q5XIJ5	Q5XIJ5	AB17A_RAT	Abhd17a	Alpha/beta hydrolase domain-containing protein 17A	1	RFISQELPSQR	RFISQELPSQR	3	RFISQELPSQR3	3967.91	3191.75	7048.49
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	RFLDFIGHILT	RFLDFIGHILT	2	RFLDFIGHILT2	13000.5	17530	19621
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	RFLDFIGHILT	RFLDFIGHILT	3	RFLDFIGHILT3	82182.6	48954.4	58442.4
Q9Z0W7	Q9Z0W7	CLIC4_RAT	Clic4	Chloride intracellular channel protein 4	1	RFLDGDEMTLADCNLLPK	RFLDGDEMTLADC(UniMod:4)NLLPK	3	RFLDGDEMTLADC(UniMod:4)NLLPK3	17577.5	15714.3	12251.1
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	RFLDLLEPLGR	RFLDLLEPLGR	2	RFLDLLEPLGR2	8118.38		
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	RFLDLLEPLGR	RFLDLLEPLGR	3	RFLDLLEPLGR3	39798.5	90111.6	51722.7
Q66H63	Q66H63	GDAP2_RAT	Gdap2	Ganglioside-induced differentiation-associated-protein 2	1	RFLEIHGETIEK	RFLEIHGETIEK	3	RFLEIHGETIEK3	3659.04	5331.56	
Q80Z30	Q80Z30	PPM1E_RAT	Ppm1e	Protein phosphatase 1E	1	RFLELFLGEFR	RFLELFLGEFR	3	RFLELFLGEFR3	5068.34	6855.96	1632.47
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	RFLFFTK	RFLFFTK	2	RFLFFTK2	24012.3	21142.6	25025.1
B1WBV4	B1WBV4	B1WBV4_RAT	Plekhf2	Pleckstrin homology and FYVE domain containing 2	1	RFLLPSQSSKPVR	RFLLPSQSSKPVR	3	RFLLPSQSSKPVR3	9941.51	13371.5	11138
Q62740	Q62740	SPP24_RAT	Spp2	Secreted phosphoprotein 24	1	RFLNLQR	RFLNLQR	2	RFLNLQR2	5743.4	11225.5	11961
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	RFLVHDAFWALPK	RFLVHDAFWALPK	3	RFLVHDAFWALPK3	10608.4	12397.2	11912.3
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	RFLVHDAFWALPK	RFLVHDAFWALPK	4	RFLVHDAFWALPK4	11714.9	12129.4	5557
D3ZYS7	D3ZYS7	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	1	RFMQTFVLAPEGSVANK	RFMQTFVLAPEGSVANK	3	RFMQTFVLAPEGSVANK3		8128.81	2589.87
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	RFNDGTDEK	RFNDGTDEK	2	RFNDGTDEK2			134529
O88377	O88377	PI42B_RAT	Pip4k2b	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta	1	RFNEFMSNILT	RFNEFMSNILT	2	RFNEFMSNILT2	67053.4	68596.7	69631.1
P04762	P04762	CATA_RAT	Cat	Catalase	1	RFNSANEDNVTQVR	RFNSANEDNVTQVR	3	RFNSANEDNVTQVR3	6458.63	10295.6	5602.86
O55004	O55004	RNAS4_RAT	Rnase4	Ribonuclease 4	1	RFNTFIHEDIWNIR	RFNTFIHEDIWNIR	3	RFNTFIHEDIWNIR3	6214.51	5072.7	5558.96
O55004	O55004	RNAS4_RAT	Rnase4	Ribonuclease 4	1	RFNTFIHEDIWNIR	RFNTFIHEDIWNIR	4	RFNTFIHEDIWNIR4	6561.67	6896.25	7200.09
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	RFPALSYYCK	RFPALSYYC(UniMod:4)K	3	RFPALSYYC(UniMod:4)K3	13771.2	12020.4	14924.9
P09895	A0A8I6GKE4;P09895	RL5_RAT	Rpl5	Large ribosomal subunit protein uL18	0	RFPGYDSESK	RFPGYDSESK	2	RFPGYDSESK2	10778.7	7300.16	5237.73
Q66H12	Q66H12	NAGAB_RAT	Naga	Alpha-N-acetylgalactosaminidase	1	RFPHGIAFLADYAHSLGLK	RFPHGIAFLADYAHSLGLK	3	RFPHGIAFLADYAHSLGLK3		1733.78	
Q66H12	Q66H12	NAGAB_RAT	Naga	Alpha-N-acetylgalactosaminidase	1	RFPHGIAFLADYAHSLGLK	RFPHGIAFLADYAHSLGLK	4	RFPHGIAFLADYAHSLGLK4	9993.65	11254.4	13608.4
D4A8B0	D4A8B0	D4A8B0_RAT	Sec14l5	SEC14-like lipid binding 5	1	RFPTCPLIPVFLGSEVLSECR	RFPTC(UniMod:4)PLIPVFLGSEVLSEC(UniMod:4)R	3	RFPTC(UniMod:4)PLIPVFLGSEVLSEC(UniMod:4)R3	4443.3	6456.04	6489.37
D4AE59	D4AE59	STK11_RAT	Stk11	Serine/threonine-protein kinase STK11	1	RFPVCQAHGYFR	RFPVC(UniMod:4)QAHGYFR	3	RFPVC(UniMod:4)QAHGYFR3	12805.1	14673.7	14243.8
O54923	O54923	EXOC6_RAT	Exoc6	Exocyst complex component 6	1	RFQDAGK	RFQDAGK	2	RFQDAGK2			24582.6
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	RFQDDLDVR	RFQDDLDVR	2	RFQDDLDVR2	122332	126069	124486
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	RFQDDLDVR	RFQDDLDVR	3	RFQDDLDVR3	38812.1	62566.9	83121.9
P29288	P29288	PPA5_RAT	Acp5	Tartrate-resistant acid phosphatase type 5	1	RFQETFEDVFSDR	RFQETFEDVFSDR	3	RFQETFEDVFSDR3	6424.25		
M0R6J0	M0R6J0	M0R6J0_RAT	Mrpl39	Mitochondrial ribosomal protein L39	1	RFQGLSLPIHLR	RFQGLSLPIHLR	3	RFQGLSLPIHLR3	5781.55	877.438	3310.82
P27615	P27615	SCRB2_RAT	Scarb2	Lysosome membrane protein 2	1	RFQINTYVK	RFQINTYVK	2	RFQINTYVK2	3716.42	3341.86	6166.91
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	RFQLEELRK	RFQLEELRK	3	RFQLEELRK3	31958.7	14637.7	6973.2
P50398	P50398	GDIA_RAT	Gdi1	Rab GDP dissociation inhibitor alpha	1	RFQLLEGPPESMGR	RFQLLEGPPESMGR	3	RFQLLEGPPESMGR3	27972.1	33338.5	29797.2
Q2QDE7	Q2QDE7	DNSL1_RAT	Dnase1l1	Deoxyribonuclease-1-like 1	1	RFQLTEEEALR	RFQLTEEEALR	3	RFQLTEEEALR3	898.628		4707.56
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	RFQMIPLDPK	RFQMIPLDPK	2	RFQMIPLDPK2	3.33372e+06	3.74585e+06	3.61619e+06
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	RFQMIPLDPK	RFQMIPLDPK	3	RFQMIPLDPK3	6.6109e+06	7.78954e+06	7.66859e+06
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	RFQNVAK	RFQNVAK	2	RFQNVAK2	545820		736325
Q3B7V5	Q3B7V5	Q3B7V5_RAT	Rab2b	RAB2B, member RAS oncogene family	1	RFQPVHDLTIGVEFGAR	RFQPVHDLTIGVEFGAR	3	RFQPVHDLTIGVEFGAR3	1527.36		
Q3B7V5	Q3B7V5	Q3B7V5_RAT	Rab2b	RAB2B, member RAS oncogene family	1	RFQPVHDLTIGVEFGAR	RFQPVHDLTIGVEFGAR	4	RFQPVHDLTIGVEFGAR4	25041	29970.6	26189.4
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	RFQQFIR	RFQQFIR	2	RFQQFIR2	8837.63	7415.56	5755.81
A0A0G2K490	A0A0G2K490;A0A8I5ZLV4	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	0	RFQQMDVLEGLNVLVTISGK	RFQQMDVLEGLNVLVTISGK	3	RFQQMDVLEGLNVLVTISGK3	1439.53		
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	RFQSTDVAEEVYTR	RFQSTDVAEEVYTR	3	RFQSTDVAEEVYTR3	14175.4	12804	17382.6
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	RFQSVPAQPGQTSPLLQYFGILLDQGQLNK	RFQSVPAQPGQTSPLLQYFGILLDQGQLNK	4	RFQSVPAQPGQTSPLLQYFGILLDQGQLNK4	14094	6140.03	9899.67
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	RFQVEQIGENK	RFQVEQIGENK	3	RFQVEQIGENK3	12186.2	17856.7	14033.3
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	RFSAATYLMDK	RFSAATYLMDK	3	RFSAATYLMDK3	7550.88	9762.12	7346.7
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	RFSDFLGLYEK	RFSDFLGLYEK	2	RFSDFLGLYEK2	5933.66	5077.88	2733.74
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	RFSDFLGLYEK	RFSDFLGLYEK	3	RFSDFLGLYEK3	21851.9	28125	21782.8
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	RFSDQFPLPLK	RFSDQFPLPLK	3	RFSDQFPLPLK3	44132.9	48512	44265.4
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	RFSEGTSADR	RFSEGTSADR	2	RFSEGTSADR2			3609.48
O35397	O35397	CASP6_RAT	Casp6	Caspase-6	1	RFSELGFEVK	RFSELGFEVK	3	RFSELGFEVK3	9807.89	12698.8	10945.2
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	RFSFSGNTLVSSSADPK	RFSFSGNTLVSSSADPK	3	RFSFSGNTLVSSSADPK3	102624	136271	117216
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	RFSGCTLTDGTLKK	RFSGC(UniMod:4)TLTDGTLKK	3	RFSGC(UniMod:4)TLTDGTLKK3	3431.9	4359.19	2858.53
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	RFSLAGATNLNGGLLR	RFSLAGATNLNGGLLR	2	RFSLAGATNLNGGLLR2	21907.9	25850.2	
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	RFSLAGATNLNGGLLR	RFSLAGATNLNGGLLR	3	RFSLAGATNLNGGLLR3	26199.7	31626.6	20242.2
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	RFSLAGATNLNGGLLRGIEILNR	RFSLAGATNLNGGLLRGIEILNR	4	RFSLAGATNLNGGLLRGIEILNR4	12822.8	7813.06	8016.75
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	RFSLFGK	RFSLFGK	2	RFSLFGK2	218465	217185	218486
Q9R063	Q9R063	PRDX5_RAT	Prdx5	Peroxiredoxin-5, mitochondrial	1	RFSMVIDK	RFSMVIDK	2	RFSMVIDK2	91155.7	92977.7	97258.8
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	RFSTPDAAPVSTEPAWLALAK	RFSTPDAAPVSTEPAWLALAK	3	RFSTPDAAPVSTEPAWLALAK3	28453.8	33914	39737.4
O35152	O35152	BET1L_RAT	Bet1l	BET1-like protein	1	RFSTVAR	RFSTVAR	2	RFSTVAR2	135913	128927	54560.5
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	RFSVTAEGGLTLEQVTDAR	RFSVTAEGGLTLEQVTDAR	3	RFSVTAEGGLTLEQVTDAR3	13710.2	30361.4	24022.5
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	RFTAQGLPDLNHSQVYAVK	RFTAQGLPDLNHSQVYAVK	4	RFTAQGLPDLNHSQVYAVK4	14801.7	14919.3	27056.5
Q63450	Q63450	KCC1A_RAT	Camk1	Calcium/calmodulin-dependent protein kinase type 1	1	RFTCEQALQHPWIAGDTALDK	RFTC(UniMod:4)EQALQHPWIAGDTALDK	4	RFTC(UniMod:4)EQALQHPWIAGDTALDK4			2557.05
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	RFTMELAK	RFTMELAK	2	RFTMELAK2	25132.8	27978.1	23899.7
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	RFTSIVVANGK	RFTSIVVANGK	3	RFTSIVVANGK3	5379.8	14823.1	14498.9
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	RFTSYVQEK	RFTSYVQEK	2	RFTSYVQEK2	11763.8	15844.2	14000
P28077	P28077	PSB9_RAT	Psmb9	Proteasome subunit beta type-9	1	RFTTDAITLAMNR	RFTTDAITLAMNR	2	RFTTDAITLAMNR2	2164.47	2580.72	
P28077	P28077	PSB9_RAT	Psmb9	Proteasome subunit beta type-9	1	RFTTDAITLAMNR	RFTTDAITLAMNR	3	RFTTDAITLAMNR3	95781.6	97195.4	85786
Q3KRE2	Q3KRE2	Q3KRE2_RAT	Mettl7a	Methyltransferase like 7A	1	RFTVMYNEQMATR	RFTVMYNEQMATR	3	RFTVMYNEQMATR3	2527.33	3438.36	4124.46
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	RFVDYCLHK	RFVDYC(UniMod:4)LHK	3	RFVDYC(UniMod:4)LHK3	10143.3	5752.83	22256.5
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	RFVFHNEQVYCPDCAK	RFVFHNEQVYC(UniMod:4)PDC(UniMod:4)AK	3	RFVFHNEQVYC(UniMod:4)PDC(UniMod:4)AK3	26397.3	29256	12825.7
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	RFVFHNEQVYCPDCAK	RFVFHNEQVYC(UniMod:4)PDC(UniMod:4)AK	4	RFVFHNEQVYC(UniMod:4)PDC(UniMod:4)AK4	63573.4	54267.3	104042
D4ADQ1	D4ADQ1	D4ADQ1_RAT	Rrm2b	Ribonucleotide reductase regulatory TP53 inducible subunit M2B	1	RFVIFPIQYPDIWK	RFVIFPIQYPDIWK	3	RFVIFPIQYPDIWK3	11721.2	10931.4	6489.28
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	RFVLLPNIDLVMPK	RFVLLPNIDLVMPK	3	RFVLLPNIDLVMPK3	9051.12	8473.4	8245.85
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	RFVPVACICR	RFVPVAC(UniMod:4)IC(UniMod:4)R	3	RFVPVAC(UniMod:4)IC(UniMod:4)R3	38152.7	48118.6	42770.6
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	RFYEQMNGPVTAGSR	RFYEQMNGPVTAGSR	3	RFYEQMNGPVTAGSR3	50073.6	60598.4	70671.8
Q68A21	Q68A21;D3ZYS1	PURB_RAT	Purb	Transcriptional activator protein Pur-beta	0	RFYLDVK	RFYLDVK	2	RFYLDVK2	440314	444858	448593
A0A8I5ZSB0	A0A8I5ZSB0	A0A8I5ZSB0_RAT	Igtp	Interferon gamma induced GTPase	1	RFYVVWTK	RFYVVWTK	2	RFYVVWTK2	4890.41	4686.3	6276.37
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	RGACSVGANVR	RGAC(UniMod:4)SVGANVR	3	RGAC(UniMod:4)SVGANVR3	27355.5	20383.2	17994.1
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	RGADDDRGPWR	RGADDDRGPWR	3	RGADDDRGPWR3	48010	59064.9	65286.2
A0A0G2K0W3	A0A0G2K0W3	A0A0G2K0W3_RAT	Ttyh3	Protein tweety homolog	1	RGADEDGEEETAPGPR	RGADEDGEEETAPGPR	3	RGADEDGEEETAPGPR3	15844.7	77597.3	47487.3
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	RGAESILAAPAPQQHQERPGAVAIGSVR	RGAESILAAPAPQQHQERPGAVAIGSVR	4	RGAESILAAPAPQQHQERPGAVAIGSVR4	5333.36	6372.46	6032.33
Q62902	Q62902	LMAN1_RAT	Lman1	Protein ERGIC-53	1	RGAGTPGQPGQVSQQELDTVVR	RGAGTPGQPGQVSQQELDTVVR	3	RGAGTPGQPGQVSQQELDTVVR3	3986.74		
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	RGALQAIDQMSLFR	RGALQAIDQMSLFR	3	RGALQAIDQMSLFR3	8026.64	5958.28	9187.04
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	RGALQAIDQMSLFRPLCK	RGALQAIDQMSLFRPLC(UniMod:4)K	3	RGALQAIDQMSLFRPLC(UniMod:4)K3	2307.75	4530.61	
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	RGALQAIDQMSLFRPLCK	RGALQAIDQMSLFRPLC(UniMod:4)K	4	RGALQAIDQMSLFRPLC(UniMod:4)K4	7409.04	10326.6	10240.2
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	RGAMSVDSITDLDDNQSR	RGAMSVDSITDLDDNQSR	3	RGAMSVDSITDLDDNQSR3	14256.5	10880.9	8799.58
P43244	P43244	MATR3_RAT	Matr3	Matrin-3	1	RGAPPSSNIEDFHGLLPK	RGAPPSSNIEDFHGLLPK	3	RGAPPSSNIEDFHGLLPK3	11725.8	1332.52	
P43244	P43244	MATR3_RAT	Matr3	Matrin-3	1	RGAPPSSNIEDFHGLLPK	RGAPPSSNIEDFHGLLPK	4	RGAPPSSNIEDFHGLLPK4	16719.9	2102.85	
Q4KLG1	Q4KLG1	Q4KLG1_RAT	Mospd3	Motile sperm domain containing 3	1	RGAPQDQELVGPGAPGR	RGAPQDQELVGPGAPGR	3	RGAPQDQELVGPGAPGR3	3227.55	2991.26	5384.65
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	RGAPSSSGGSSISGPK	RGAPSSSGGSSISGPK	3	RGAPSSSGGSSISGPK3	154391	97644.3	86394.4
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	RGATELTHEDYMEGILEVQAK	RGATELTHEDYMEGILEVQAK	4	RGATELTHEDYMEGILEVQAK4	15763.9	19286.1	8560.99
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	RGAVDISACGVPCPVGEFSR	RGAVDISAC(UniMod:4)GVPC(UniMod:4)PVGEFSR	3	RGAVDISAC(UniMod:4)GVPC(UniMod:4)PVGEFSR3	72380	81535.8	94693.9
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	RGAYLNALK	RGAYLNALK	2	RGAYLNALK2	20852.1	27648.1	22778.6
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	RGCAGVITLNRPK	RGC(UniMod:4)AGVITLNRPK	3	RGC(UniMod:4)AGVITLNRPK3	22791.9	16779.7	26297.9
P25236	P25236	SEPP1_RAT	Selenop	Selenoprotein P	1	RGCINQLLCK	RGC(UniMod:4)INQLLC(UniMod:4)K	2	RGC(UniMod:4)INQLLC(UniMod:4)K2	48284.1	46785.5	49955.8
P25236	P25236	SEPP1_RAT	Selenop	Selenoprotein P	1	RGCINQLLCK	RGC(UniMod:4)INQLLC(UniMod:4)K	3	RGC(UniMod:4)INQLLC(UniMod:4)K3	131642	153146	135589
P18292	P18292	THRB_RAT	F2	Prothrombin	1	RGDACEGDSGGPFVMK	RGDAC(UniMod:4)EGDSGGPFVMK	2	RGDAC(UniMod:4)EGDSGGPFVMK2	3.31093e+06	3.03029e+06	3.29292e+06
P18292	P18292	THRB_RAT	F2	Prothrombin	1	RGDACEGDSGGPFVMK	RGDAC(UniMod:4)EGDSGGPFVMK	3	RGDAC(UniMod:4)EGDSGGPFVMK3	97894.6	137664	153596
P18292	P18292	THRB_RAT	F2	Prothrombin	1	RGDACEGDSGGPFVMK	RGDAC(UniMod:4)EGDSGGPFVMK	4	RGDAC(UniMod:4)EGDSGGPFVMK4	285386	242031	279018
P18292	P18292	THRB_RAT	F2	Prothrombin	1	RGDACEGDSGGPFVMKSPYNHR	RGDAC(UniMod:4)EGDSGGPFVMKSPYNHR	4	RGDAC(UniMod:4)EGDSGGPFVMKSPYNHR4	1583.75	9190.49	4460.56
Q5XIP9	Q5XIP9	TMM43_RAT	Tmem43	Transmembrane protein 43	1	RGDFFYHSENPK	RGDFFYHSENPK	3	RGDFFYHSENPK3	25378.5	11484.6	17591.1
Q5XIP9	Q5XIP9	TMM43_RAT	Tmem43	Transmembrane protein 43	1	RGDFFYHSENPKYPEVGDVR	RGDFFYHSENPKYPEVGDVR	4	RGDFFYHSENPKYPEVGDVR4	19810.8	27829.1	34157.8
P62994	P62994	GRB2_RAT	Grb2	Growth factor receptor-bound protein 2	1	RGDFIHVMDNSDPNWWK	RGDFIHVMDNSDPNWWK	3	RGDFIHVMDNSDPNWWK3	11034.8	15426.4	14686
P62994	P62994	GRB2_RAT	Grb2	Growth factor receptor-bound protein 2	1	RGDFIHVMDNSDPNWWK	RGDFIHVMDNSDPNWWK	4	RGDFIHVMDNSDPNWWK4	33419	37202.5	33458.4
D4A5G8	D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	RGDFIPGLR	RGDFIPGLR	2	RGDFIPGLR2	5207.2	4404.58	2982.04
Q5RKI6	Q5RKI6	EIF1A_RAT	Eif1ad	Probable RNA-binding protein EIF1AD	1	RGDFLIVDPIEEGEK	RGDFLIVDPIEEGEK	3	RGDFLIVDPIEEGEK3	13976.4	19121	9669.96
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	RGDFLQMVLDAQR	RGDFLQMVLDAQR	2	RGDFLQMVLDAQR2	12931.4	14059.4	21375.9
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	RGDFLQMVLDAQR	RGDFLQMVLDAQR	3	RGDFLQMVLDAQR3	228693	254854	240508
Q63016	Q63016	LAT1_RAT	Slc7a5	Large neutral amino acids transporter small subunit 1	1	RGDGADPEGEGVTLQR	RGDGADPEGEGVTLQR	3	RGDGADPEGEGVTLQR3	61425.2	69048.4	51332.3
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	RGDIIGVEGNPGK	RGDIIGVEGNPGK	3	RGDIIGVEGNPGK3	32537.6	33480.7	39677.4
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	RGDKDLHLGDR	RGDKDLHLGDR	3	RGDKDLHLGDR3	1541.28		785.2
P23377	P23377	FURIN_RAT	Furin	Furin	1	RGDLAIHLISPMGTR	RGDLAIHLISPMGTR	3	RGDLAIHLISPMGTR3	7529.04	9884.08	10608.4
P23377	P23377	FURIN_RAT	Furin	Furin	1	RGDLAIHLISPMGTR	RGDLAIHLISPMGTR	4	RGDLAIHLISPMGTR4	9077.27	13978.6	7956.9
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	RGDLAIYLTSPSGTR	RGDLAIYLTSPSGTR	3	RGDLAIYLTSPSGTR3	116035	134952	133850
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	RGDLEPQLGSPQQKPK	RGDLEPQLGSPQQKPK	3	RGDLEPQLGSPQQKPK3	3996.36	2318.13	
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	RGDLGTIHDMNR	RGDLGTIHDMNR	3	RGDLGTIHDMNR3	4880.5		
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	RGDLGTIHDMNRPFLLLMATPLER	RGDLGTIHDMNRPFLLLMATPLER	4	RGDLGTIHDMNRPFLLLMATPLER4	115926	102268	131570
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	RGDMPFVVTR	RGDMPFVVTR	2	RGDMPFVVTR2	1.11735e+06	1.45122e+06	1.28286e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	RGDMPFVVTR	RGDMPFVVTR	3	RGDMPFVVTR3	1.0238e+07	1.37947e+07	1.32307e+07
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	RGDMPFVVTRR	RGDMPFVVTRR	3	RGDMPFVVTRR3	10146.2	12153.6	6127.67
Q792I0	Q9Z252;Q792I0;Q9Z250	LIN7C_RAT	Lin7c	Protein lin-7 homolog C	0	RGDQLLSVNGVSVEGEHHEK	RGDQLLSVNGVSVEGEHHEK	4	RGDQLLSVNGVSVEGEHHEK4	16510	25318.6	17001.6
Q63186	Q63186	EI2BD_RAT	Eif2b4	Translation initiation factor eIF-2B subunit delta	1	RGDQVTLANWQNNSSLR	RGDQVTLANWQNNSSLR	3	RGDQVTLANWQNNSSLR3	10544.1	6363.89	11788.8
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	RGDSYDLK	RGDSYDLK	2	RGDSYDLK2	24072.4	38625.1	28416.8
G3V909	G3V909	ATF6A_RAT	Atf6	Cyclic AMP-dependent transcription factor ATF-6 alpha	1	RGDTFYVVSFR	RGDTFYVVSFR	3	RGDTFYVVSFR3	30423.2	19068.7	10270.2
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	RGDVIYILSK	RGDVIYILSK	2	RGDVIYILSK2	420975	410473	428538
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	RGDVIYILSK	RGDVIYILSK	3	RGDVIYILSK3	311701	363582	407103
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	RGDVLAAWSGIR	RGDVLAAWSGIR	3	RGDVLAAWSGIR3	29762	34324.1	27575.8
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	RGDVLAAWSGIRPLVTDPK	RGDVLAAWSGIRPLVTDPK	3	RGDVLAAWSGIRPLVTDPK3	154424	175837	157922
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	RGDVLAAWSGIRPLVTDPK	RGDVLAAWSGIRPLVTDPK	4	RGDVLAAWSGIRPLVTDPK4	79609.4	85153.7	89823.8
Q63632	Q63632	S12A4_RAT	Slc12a4	Solute carrier family 12 member 4	1	RGDYDNLEGLSWVDYGER	RGDYDNLEGLSWVDYGER	3	RGDYDNLEGLSWVDYGER3	164882	262757	200194
Q5U2N0	Q5U2N0	PYRG2_RAT	Ctps2	CTP synthase 2	1	RGDYLGK	RGDYLGK	2	RGDYLGK2		11877.6	
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	RGEACEVVIDSTEYVDPSYK	RGEAC(UniMod:4)EVVIDSTEYVDPSYK	3	RGEAC(UniMod:4)EVVIDSTEYVDPSYK3	44087.3	46392.2	51893.7
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	RGEAHLAVNDFDLAR	RGEAHLAVNDFDLAR	3	RGEAHLAVNDFDLAR3	11994.2	15267.9	11561
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	RGEAHLAVNDFDLAR	RGEAHLAVNDFDLAR	4	RGEAHLAVNDFDLAR4	17179.2	11008.9	19716.6
F7EYK0	F7EYK0	F7EYK0_RAT	Fkbp5	peptidylprolyl isomerase	1	RGEAQLLMNEFESAK	RGEAQLLMNEFESAK	3	RGEAQLLMNEFESAK3	22365.8	18813.4	18327.2
P63036	P63036	DNJA1_RAT	Dnaja1	DnaJ homolog subfamily A member 1	1	RGEDLFMCMDIQLVEALCGFQKPISTLDNR	RGEDLFMC(UniMod:4)MDIQLVEALC(UniMod:4)GFQKPISTLDNR	4	RGEDLFMC(UniMod:4)MDIQLVEALC(UniMod:4)GFQKPISTLDNR4		2370.79	3549.47
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	RGEDNHWICKPWNLAR	RGEDNHWIC(UniMod:4)KPWNLAR	4	RGEDNHWIC(UniMod:4)KPWNLAR4	7424.32	5293.16	10511.2
Q6URK4	Q6URK4	ROA3_RAT	Hnrnpa3	Heterogeneous nuclear ribonucleoprotein A3	1	RGEEGHDPKEPEQLR	RGEEGHDPKEPEQLR	4	RGEEGHDPKEPEQLR4	13781.3	6734.25	5071.41
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	RGEELIGR	RGEELIGR	2	RGEELIGR2	2638.48		
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	RGEEPAEPEPEPTEAWK	RGEEPAEPEPEPTEAWK	2	RGEEPAEPEPEPTEAWK2	1772.72	1500.51	1143.32
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	RGEEPAEPEPEPTEAWK	RGEEPAEPEPEPTEAWK	3	RGEEPAEPEPEPTEAWK3	283570	288230	273971
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	RGEEPAEPEPEPTEAWKK	RGEEPAEPEPEPTEAWKK	4	RGEEPAEPEPEPTEAWKK4	3564.07	10860.2	5825.93
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	RGEESSEMEQISIIER	RGEESSEMEQISIIER	3	RGEESSEMEQISIIER3	65982.9	62889.7	83516.3
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	RGEFCIAK	RGEFC(UniMod:4)IAK	2	RGEFC(UniMod:4)IAK2	66725.7	50747.4	56204
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	RGEFFELIR	RGEFFELIR	2	RGEFFELIR2	24738.1	31788.4	22708.3
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	RGEFFELIR	RGEFFELIR	3	RGEFFELIR3	70218	96167.5	94604
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	RGEFFELIRK	RGEFFELIRK	3	RGEFFELIRK3	10884	22419.1	5151.63
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	RGEIEELQHCLLQSGPPPADHPEAAETLR	RGEIEELQHC(UniMod:4)LLQSGPPPADHPEAAETLR	4	RGEIEELQHC(UniMod:4)LLQSGPPPADHPEAAETLR4	74604.9	91605	122156
D3ZFK6	D3ZFK6	D3ZFK6_RAT	Atg16l1	Autophagy related 16-like 1	1	RGELAQLVIDLNNQMQQK	RGELAQLVIDLNNQMQQK	3	RGELAQLVIDLNNQMQQK3	4357	5861.91	6093.59
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	RGELESAQEQIK	RGELESAQEQIK	3	RGELESAQEQIK3	12725.1	11847.6	15190.2
P51794	P51794	CLCN4_RAT	Clcn4	H(+)/Cl(-) exchange transporter 4	1	RGEPPLSVLTQDSMTVEDVETLIK	RGEPPLSVLTQDSMTVEDVETLIK	3	RGEPPLSVLTQDSMTVEDVETLIK3		5969.2	3440.79
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	RGEQCVHTASGPHCFCPNHK	RGEQC(UniMod:4)VHTASGPHC(UniMod:4)FC(UniMod:4)PNHK	4	RGEQC(UniMod:4)VHTASGPHC(UniMod:4)FC(UniMod:4)PNHK4	1968.8	2191.03	5043.75
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	RGESHWWMK	RGESHWWMK	3	RGESHWWMK3	6341.82	8703.43	6019.84
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	RGETESEEFEK	RGETESEEFEK	2	RGETESEEFEK2	31387.9	28699.4	42289.3
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	RGETESEEFEK	RGETESEEFEK	3	RGETESEEFEK3	118260	114904	101734
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	RGEVPAELR	RGEVPAELR	2	RGEVPAELR2	11145.9	16462.4	7316.74
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	RGEVPAELRR	RGEVPAELRR	3	RGEVPAELRR3	66614	55561.1	41707.5
P04256	P04256	ROA1_RAT	Hnrnpa1	Heterogeneous nuclear ribonucleoprotein A1	1	RGFAFVTFDDHDSVDK	RGFAFVTFDDHDSVDK	3	RGFAFVTFDDHDSVDK3	28337.4	13910.6	
P04256	P04256	ROA1_RAT	Hnrnpa1	Heterogeneous nuclear ribonucleoprotein A1	1	RGFAFVTFDDHDSVDK	RGFAFVTFDDHDSVDK	4	RGFAFVTFDDHDSVDK4	28394.1	11780.7	2087.02
Q6URK4	D4A6A2;E9PSU5;F1M6C7;Q6URK4	ROA3_RAT	Hnrnpa3	Heterogeneous nuclear ribonucleoprotein A3	0	RGFAFVTFDDHDTVDK	RGFAFVTFDDHDTVDK	3	RGFAFVTFDDHDTVDK3	11414.6	6750.89	
Q6URK4	D4A6A2;E9PSU5;F1M6C7;Q6URK4	ROA3_RAT	Hnrnpa3	Heterogeneous nuclear ribonucleoprotein A3	0	RGFAFVTFDDHDTVDK	RGFAFVTFDDHDTVDK	4	RGFAFVTFDDHDTVDK4	8383.99		2671.81
P15473	P15473	IBP3_RAT	Igfbp3	Insulin-like growth factor-binding protein 3	1	RGFCWCVDK	RGFC(UniMod:4)WC(UniMod:4)VDK	2	RGFC(UniMod:4)WC(UniMod:4)VDK2	3006.82	1775.22	3795.65
Q9WVC0	Q9WVC0	SEPT7_RAT	Septin7	Septin-7	1	RGFEFTLMVVGESGLGK	RGFEFTLMVVGESGLGK	3	RGFEFTLMVVGESGLGK3	15251.6	6819.42	13620.8
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	RGFEVVYMTEPIDEYCVQQLK	RGFEVVYMTEPIDEYC(UniMod:4)VQQLK	3	RGFEVVYMTEPIDEYC(UniMod:4)VQQLK3	711279	939289	808386
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	RGFEVVYMTEPIDEYCVQQLK	RGFEVVYMTEPIDEYC(UniMod:4)VQQLK	4	RGFEVVYMTEPIDEYC(UniMod:4)VQQLK4		12102.8	2025.63
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	RGFFICDQPYEPVSPYSCK	RGFFIC(UniMod:4)DQPYEPVSPYSC(UniMod:4)K	3	RGFFIC(UniMod:4)DQPYEPVSPYSC(UniMod:4)K3	5838.55	7265.58	9930.02
A7VJC2	A7VJC2;A0A8I5Y7P1	ROA2_RAT	Hnrnpa2b1	Heterogeneous nuclear ribonucleoproteins A2/B1	0	RGFGFVTFDDHDPVDK	RGFGFVTFDDHDPVDK	2	RGFGFVTFDDHDPVDK2	4364.53		
A7VJC2	A7VJC2;A0A8I5Y7P1	ROA2_RAT	Hnrnpa2b1	Heterogeneous nuclear ribonucleoproteins A2/B1	0	RGFGFVTFDDHDPVDK	RGFGFVTFDDHDPVDK	3	RGFGFVTFDDHDPVDK3	101083	40930	2746.35
A7VJC2	A7VJC2;A0A8I5Y7P1	ROA2_RAT	Hnrnpa2b1	Heterogeneous nuclear ribonucleoproteins A2/B1	0	RGFGFVTFDDHDPVDK	RGFGFVTFDDHDPVDK	4	RGFGFVTFDDHDPVDK4	122139	41817.8	11579.5
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	RGFGSLNDK	RGFGSLNDK	2	RGFGSLNDK2	820684	842548	863687
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	RGFGSLNDKGEGEFWLGNDYLHLLTLR	RGFGSLNDKGEGEFWLGNDYLHLLTLR	4	RGFGSLNDKGEGEFWLGNDYLHLLTLR4	12425.4	5188.02	
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	RGFHCESSAHWPIFK	RGFHC(UniMod:4)ESSAHWPIFK	4	RGFHC(UniMod:4)ESSAHWPIFK4	53597.8	27014.8	34828.1
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	RGFHMVTNESPLK	RGFHMVTNESPLK	3	RGFHMVTNESPLK3	5463.63	11970	5991.64
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	RGFPSILGPPR	RGFPSILGPPR	3	RGFPSILGPPR3	14995	15526.8	13153.3
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	RGFQADYYSTPISTSTR	RGFQADYYSTPISTSTR	2	RGFQADYYSTPISTSTR2	11376.7	13277.7	13260.6
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	RGFQADYYSTPISTSTR	RGFQADYYSTPISTSTR	3	RGFQADYYSTPISTSTR3	545445	763129	601617
Q5XHY5	Q5XHY5	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	1	RGFQEVVTPNIFNSR	RGFQEVVTPNIFNSR	3	RGFQEVVTPNIFNSR3	7169.57	2876.67	3493.7
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	RGFQGSFEELCR	RGFQGSFEELC(UniMod:4)R	3	RGFQGSFEELC(UniMod:4)R3	3864.13	2282.66	4305.53
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	RGFYYYQR	RGFYYYQR	3	RGFYYYQR3	34842.8	42513.9	33885.4
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	RGGAGPGGTGGGWK	RGGAGPGGTGGGWK	3	RGGAGPGGTGGGWK3	8221.74	11612.3	26786.7
Q6QBQ4	Q6QBQ4	PLS3_RAT	Plscr3	Phospholipid scramblase 3	1	RGGAGPSAITS	RGGAGPSAITS	2	RGGAGPSAITS2	27038.1	22389.1	36015.2
Q642G4	Q642G4	PEX14_RAT	Pex14	Peroxisomal membrane protein PEX14	1	RGGDGQINEQVEK	RGGDGQINEQVEK	3	RGGDGQINEQVEK3	18599.8	7788.98	24312.7
A0FKI7	A0FKI7	ACBD5_RAT	Acbd5	Acyl-CoA-binding domain-containing protein 5	1	RGGESEDISGVR	RGGESEDISGVR	3	RGGESEDISGVR3	5834.58	4661.68	6037.28
Q66H24	Q66H24	CI040_RAT		Uncharacterized protein C9orf40 homolog	1	RGGGDDEPELQGR	RGGGDDEPELQGR	3	RGGGDDEPELQGR3		2262.63	2197.07
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	RGGGGDEEPGEYQHIHTESPESADEQK	RGGGGDEEPGEYQHIHTESPESADEQK	4	RGGGGDEEPGEYQHIHTESPESADEQK4	3263.49	8067.55	11336.9
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	RGGGGHDALKGPNVCGSR	RGGGGHDALKGPNVC(UniMod:4)GSR	4	RGGGGHDALKGPNVC(UniMod:4)GSR4		7913.45	14269.8
F1M798	F1M280;F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	0	RGGGPQAISIGK	RGGGPQAISIGK	3	RGGGPQAISIGK3	10404.5	12908.3	9602.07
B1WC42	B1WC42	B1WC42_RAT	Trip6	Thyroid hormone receptor interactor 6	1	RGGHEPQGPLSQPPEEELER	RGGHEPQGPLSQPPEEELER	4	RGGHEPQGPLSQPPEEELER4	6378.68	7353.51	5221.82
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	RGGNIQQYTYK	RGGNIQQYTYK	2	RGGNIQQYTYK2	13390.3	8360.63	15022
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	RGGNIQQYTYK	RGGNIQQYTYK	3	RGGNIQQYTYK3	487148	604946	506032
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	RGGPNYQEGLR	RGGPNYQEGLR	3	RGGPNYQEGLR3	22231.5	27929.4	17698
Q6AXS5	Q6AXS5	SERB1_RAT	Serbp1	SERPINE1 mRNA-binding protein 1	1	RGGSGSHNWGTVK	RGGSGSHNWGTVK	3	RGGSGSHNWGTVK3	3014.18	12691.4	15820.8
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	RGGSLPAGHQVHGHILR	RGGSLPAGHQVHGHILR	4	RGGSLPAGHQVHGHILR4	16441.7	23643.1	14133.3
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	RGGSLPAR	RGGSLPAR	2	RGGSLPAR2			18455.8
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	RGGSLPPHAQVHGSR	RGGSLPPHAQVHGSR	3	RGGSLPPHAQVHGSR3			3523.67
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	RGGTWFAGFGR	RGGTWFAGFGR	3	RGGTWFAGFGR3	25280.1	30916.2	20458
A0A8I6AR22	A0A8I6AR22	A0A8I6AR22_RAT	Zdhhc20	Palmitoyltransferase	1	RGGVAASPFATAR	RGGVAASPFATAR	3	RGGVAASPFATAR3	6328.43	8025.74	7729.79
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	RGHAQMYQQK	RGHAQMYQQK	2	RGHAQMYQQK2			6592.38
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	RGHAQMYQQK	RGHAQMYQQK	3	RGHAQMYQQK3			19616.5
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	RGHDDLGDHYLDCGDLSNALK	RGHDDLGDHYLDC(UniMod:4)GDLSNALK	3	RGHDDLGDHYLDC(UniMod:4)GDLSNALK3	5654.44		
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	RGHDDLGDHYLDCGDLSNALK	RGHDDLGDHYLDC(UniMod:4)GDLSNALK	4	RGHDDLGDHYLDC(UniMod:4)GDLSNALK4	51164.2	65878.1	59922.1
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	RGHDLIMK	RGHDLIMK	2	RGHDLIMK2	5948.94	2452.73	4043.99
A0A096MKE0	A0A096MKE0	A0A096MKE0_RAT	Asph	Aspartate-beta-hydroxylase	1	RGHFASVWQR	RGHFASVWQR	3	RGHFASVWQR3	8248.69	15071.4	17472.1
Q3B7D1	Q3B7D1	UBE2Z_RAT	Ube2z	Ubiquitin-conjugating enzyme E2 Z	1	RGHFDYQSLLMR	RGHFDYQSLLMR	3	RGHFDYQSLLMR3	17018.1	29551.7	28821.6
Q3B7D1	Q3B7D1	UBE2Z_RAT	Ube2z	Ubiquitin-conjugating enzyme E2 Z	1	RGHFDYQSLLMR	RGHFDYQSLLMR	4	RGHFDYQSLLMR4	19327.8	19618.4	24959.4
Q63768	Q63768	CRK_RAT	Crk	Adapter molecule crk	1	RGHFPFTHVR	RGHFPFTHVR	3	RGHFPFTHVR3	9410.19	2260.31	
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	RGHIFVQTDQPIYNPGQR	RGHIFVQTDQPIYNPGQR	3	RGHIFVQTDQPIYNPGQR3	189443	235280	152455
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	RGHIFVQTDQPIYNPGQR	RGHIFVQTDQPIYNPGQR	4	RGHIFVQTDQPIYNPGQR4	478598	814100	546769
Q5RJY4	Q5RJY4	DRS7B_RAT	Dhrs7b	Dehydrogenase/reductase SDR family member 7B	1	RGHIVAISSIQGK	RGHIVAISSIQGK	3	RGHIVAISSIQGK3	7104.79	6008.48	7745.5
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	RGHVFEESQVAGTPMFVVK	RGHVFEESQVAGTPMFVVK	3	RGHVFEESQVAGTPMFVVK3	11041.1	14496.7	2745.09
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	RGHVFEESQVAGTPMFVVK	RGHVFEESQVAGTPMFVVK	4	RGHVFEESQVAGTPMFVVK4	2048.37	3840.83	10226
P24594	P24594	IBP5_RAT	Igfbp5	Insulin-like growth factor-binding protein 5	1	RGICWCVDK	RGIC(UniMod:4)WC(UniMod:4)VDK	3	RGIC(UniMod:4)WC(UniMod:4)VDK3	18611.6	15752.9	11898.4
Q3B7D0	Q3B7D0	HEM6_RAT	Cpox	Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial	1	RGIGGIFFDDLDSPSK	RGIGGIFFDDLDSPSK	3	RGIGGIFFDDLDSPSK3	3984.72	2865.28	3471.62
P29410	P29410	KAD2_RAT	Ak2	Adenylate kinase 2, mitochondrial	1	RGIHCAIDASQTPDVVFASILAAFSK	RGIHC(UniMod:4)AIDASQTPDVVFASILAAFSK	4	RGIHC(UniMod:4)AIDASQTPDVVFASILAAFSK4	1474.31	5179.23	4724.34
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	RGIHVDQSELLCK	RGIHVDQSELLC(UniMod:4)K	3	RGIHVDQSELLC(UniMod:4)K3	7665.05	8380.54	4000.92
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	RGIIDLPDGGEK	RGIIDLPDGGEK	3	RGIIDLPDGGEK3	69394.2	73719.5	73595.6
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	RGIIDLPDGGEKR	RGIIDLPDGGEKR	3	RGIIDLPDGGEKR3	19886.8	15112.8	12224.6
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	RGIISALLVPPETEEDK	RGIISALLVPPETEEDK	2	RGIISALLVPPETEEDK2	18147.8	15460.7	24221.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	RGIISALLVPPETEEDK	RGIISALLVPPETEEDK	3	RGIISALLVPPETEEDK3	445284	523606	525200
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	RGIISLLEAMK	RGIISLLEAMK	2	RGIISLLEAMK2	135237	143469	113290
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	RGIISLLEAMK	RGIISLLEAMK	3	RGIISLLEAMK3	521453	617640	595390
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	RGILAVLDEACSTAGPITDR	RGILAVLDEAC(UniMod:4)STAGPITDR	3	RGILAVLDEAC(UniMod:4)STAGPITDR3	12435	10511.3	14038.1
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	RGILEVWSTQQGPR	RGILEVWSTQQGPR	3	RGILEVWSTQQGPR3	37148.6	43288.4	44663.8
P68136	P60711;P63259;D3ZRN3;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	RGILTLK	RGILTLK	2	RGILTLK2	3.71438e+06	6.57575e+06	4.54708e+06
Q641X3	Q641X3	HEXA_RAT	Hexa	Beta-hexosaminidase subunit alpha	1	RGIQAQPISVGYCEQEFEHT	RGIQAQPISVGYC(UniMod:4)EQEFEHT	3	RGIQAQPISVGYC(UniMod:4)EQEFEHT3	4923.5	7237.56	4015.44
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	RGIQYLQEQGMLGTTPEDIAQFLHQEER	RGIQYLQEQGMLGTTPEDIAQFLHQEER	4	RGIQYLQEQGMLGTTPEDIAQFLHQEER4	9794.48	16509.5	8773.16
Q6PDU7	Q6PDU7;A0A8I6AAI9	ATP5L_RAT	Atp5mg	ATP synthase subunit g, mitochondrial	0	RGIVGYDV	RGIVGYDV	2	RGIVGYDV2	247742	256303	260232
P84817	P84817	FIS1_RAT	Fis1	Mitochondrial fission 1 protein	1	RGIVLLEELLPK	RGIVLLEELLPK	3	RGIVLLEELLPK3	7533.06	6070.73	5801.03
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	RGLALDGQLK	RGLALDGQLK	2	RGLALDGQLK2	5780.13	3731.76	6858.09
Q5U4F3	Q5U4F3	F107B_RAT	Fam107b	Protein FAM107B	1	RGLAPQNKPELQK	RGLAPQNKPELQK	3	RGLAPQNKPELQK3	17615.8	17201.7	15315.9
Q4KLZ6	Q4KLZ6	TKFC_RAT	Tkfc	Triokinase/FMN cyclase	1	RGLCGTILIHK	RGLC(UniMod:4)GTILIHK	3	RGLC(UniMod:4)GTILIHK3	1442.82		
Q5XIU9	Q5XIU9	PGRC2_RAT	Pgrmc2	Membrane-associated progesterone receptor component 2	1	RGLCSGPGAGEESPAATLPR	RGLC(UniMod:4)SGPGAGEESPAATLPR	3	RGLC(UniMod:4)SGPGAGEESPAATLPR3	27591.1	18519.1	20916.2
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	RGLDDDRGPR	RGLDDDRGPR	3	RGLDDDRGPR3			5599.1
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	RGLDDDRGPWR	RGLDDDRGPWR	3	RGLDDDRGPWR3	73494.6	77010.7	46127.1
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	RGLDDDRPPR	RGLDDDRPPR	3	RGLDDDRPPR3	62894.3	53412.8	59410.3
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	RGLDVNK	RGLDVNK	2	RGLDVNK2	424128	511227	436222
B1WBY5	B1WBY5	B1WBY5_RAT	Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	1	RGLEMEGWEVVER	RGLEMEGWEVVER	3	RGLEMEGWEVVER3	24425.6	35039.1	26653.4
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	RGLETAEVNPENLAK	RGLETAEVNPENLAK	3	RGLETAEVNPENLAK3	47570	57347.5	45648.4
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	RGLEVNK	RGLEVNK	2	RGLEVNK2	525370	354900	405254
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	RGLEVSK	RGLEVSK	2	RGLEVSK2	321000	818525	
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	RGLFINSEFLPVVK	RGLFINSEFLPVVK	3	RGLFINSEFLPVVK3	956.629		7310.99
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	RGLGAPLTDDQQSR	RGLGAPLTDDQQSR	3	RGLGAPLTDDQQSR3	18763	17603.7	22256.2
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	RGLGSVFVWASGNGGR	RGLGSVFVWASGNGGR	3	RGLGSVFVWASGNGGR3	20351.5	32068.2	8603.34
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	RGLIPQNYVK	RGLIPQNYVK	2	RGLIPQNYVK2	3338.03	2221.34	5127.58
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	RGLIPQNYVK	RGLIPQNYVK	3	RGLIPQNYVK3	36413.6	37229.6	32303.1
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	RGLKPGSCYCK	RGLKPGSC(UniMod:4)YC(UniMod:4)K	3	RGLKPGSC(UniMod:4)YC(UniMod:4)K3	1341.51		1489.02
P32089	P32089	TXTP_RAT	Slc25a1	Tricarboxylate transport protein, mitochondrial	1	RGLLCGLGAGVAEAVVVVCPMETVK	RGLLC(UniMod:4)GLGAGVAEAVVVVC(UniMod:4)PMETVK	3	RGLLC(UniMod:4)GLGAGVAEAVVVVC(UniMod:4)PMETVK3	6909.02	10492.3	5795.62
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	RGLLLFVDEADAFLR	RGLLLFVDEADAFLR	3	RGLLLFVDEADAFLR3	2321.76	1003.3	3997.56
F1M9D6	F1M9D6	F1M9D6_RAT	Stat1	Signal transducer and activator of transcription	1	RGLNADQLSMLGEK	RGLNADQLSMLGEK	3	RGLNADQLSMLGEK3	9044.85		12876.1
A0A0G2K1L5	A0A0G2K1L5	A0A0G2K1L5_RAT	Reep2	Receptor expression-enhancing protein	1	RGLNLAANAAVTAAAK	RGLNLAANAAVTAAAK	3	RGLNLAANAAVTAAAK3	23571.7	12105.8	15054.3
A0A8I6AAY1	A0A8I6AAY1	A0A8I6AAY1_RAT	Cox7a2l	Cytochrome c oxidase subunit 7A2 like	1	RGLPDQMLYR	RGLPDQMLYR	3	RGLPDQMLYR3	3533.07	8340.87	3378.75
F1LXA0	F1LXA0	F1LXA0_RAT	Ndufa12	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	1	RGLQQVTGHGGLR	RGLQQVTGHGGLR	3	RGLQQVTGHGGLR3	8264.32	5111.03	
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	RGLSIEQLTTLAEK	RGLSIEQLTTLAEK	3	RGLSIEQLTTLAEK3	21563.8	16900.3	19324.9
Q5FVF9	Q5FVF9	BTD_RAT	Btd	Biotinidase	1	RGLSSGLVTAALYGR	RGLSSGLVTAALYGR	3	RGLSSGLVTAALYGR3	113990	102960	122212
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	RGLSSLSLAK	RGLSSLSLAK	2	RGLSSLSLAK2	7455.26	13456.5	10372.9
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	RGLVMVKPGSIQPHQK	RGLVMVKPGSIQPHQK	4	RGLVMVKPGSIQPHQK4	4761.15	5681	6131.99
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	RGLYLSDIPLHDATR	RGLYLSDIPLHDATR	3	RGLYLSDIPLHDATR3	57845.3	70465.3	67923.4
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	RGLYLSDIPLHDATR	RGLYLSDIPLHDATR	4	RGLYLSDIPLHDATR4	29163.5	24816.4	37995.6
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	RGMDDDRGPR	RGMDDDRGPR	2	RGMDDDRGPR2			4955.92
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	RGMDDDRGPR	RGMDDDRGPR	3	RGMDDDRGPR3			52525.5
Q63768	Q63768	CRK_RAT	Crk	Adapter molecule crk	1	RGMIPVPYVEK	RGMIPVPYVEK	2	RGMIPVPYVEK2	5491.88	4636.5	3832.88
Q63768	Q63768	CRK_RAT	Crk	Adapter molecule crk	1	RGMIPVPYVEK	RGMIPVPYVEK	3	RGMIPVPYVEK3	28498.9	22075.8	25179.4
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	RGNFIYVDIFEGHLR	RGNFIYVDIFEGHLR	3	RGNFIYVDIFEGHLR3	14814.3	19984.3	11956
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	RGNFIYVDIFEGHLR	RGNFIYVDIFEGHLR	4	RGNFIYVDIFEGHLR4	17562	21387.6	21732.9
Q6P686	Q6P686	OSTF1_RAT	Ostf1	Osteoclast-stimulating factor 1	1	RGNLSWLR	RGNLSWLR	2	RGNLSWLR2	13249.3	16921.6	17369.2
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	RGNNTTSLLSQSVAK	RGNNTTSLLSQSVAK	2	RGNNTTSLLSQSVAK2	1937.55		720.107
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	RGNNTTSLLSQSVAK	RGNNTTSLLSQSVAK	3	RGNNTTSLLSQSVAK3	100727	80921.5	124995
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	RGNPLHLCQER	RGNPLHLC(UniMod:4)QER	3	RGNPLHLC(UniMod:4)QER3	7403.8	2254.28	2891.19
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	RGPAEESSSWR	RGPAEESSSWR	3	RGPAEESSSWR3	40425.4	38465.2	55437.7
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	RGPAEGEEAVPAER	RGPAEGEEAVPAER	3	RGPAEGEEAVPAER3	27702.4	38215.2	39006.5
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	RGPALTEK	RGPALTEK	2	RGPALTEK2	3620.17	9503.71	10708.5
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	RGPCDPCGQCR	RGPC(UniMod:4)DPC(UniMod:4)GQC(UniMod:4)R	3	RGPC(UniMod:4)DPC(UniMod:4)GQC(UniMod:4)R3	6408.04		11700.8
P50878	A0A8I6ASF5;P50878	RL4_RAT	Rpl4	Large ribosomal subunit protein uL4	0	RGPCIIYNEDNGIIK	RGPC(UniMod:4)IIYNEDNGIIK	3	RGPC(UniMod:4)IIYNEDNGIIK3	23933.8	17208.2	9613.49
B1WBZ6	B1WBZ6	B1WBZ6_RAT	RGD1565685	RGD1565685 protein	1	RGPEECDAVALLSLINSCDHFVVDR	RGPEEC(UniMod:4)DAVALLSLINSC(UniMod:4)DHFVVDR	4	RGPEEC(UniMod:4)DAVALLSLINSC(UniMod:4)DHFVVDR4	14800.4	17151.5	20500.2
B0BNB9	B0BNB9	B0BNB9_RAT	Htra2	HtrA serine peptidase 2	1	RGPETLTLYVTPEVTE	RGPETLTLYVTPEVTE	2	RGPETLTLYVTPEVTE2	24842.1	31361.4	35149.3
A0A8I6ATU9	A0A8I6ATU9	A0A8I6ATU9_RAT	Atxn2	Ataxin 2	1	RGPEVTSQGVQTSSPACK	RGPEVTSQGVQTSSPAC(UniMod:4)K	3	RGPEVTSQGVQTSSPAC(UniMod:4)K3	2099.45	2158.02	5874.74
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	RGPFELEAFYSDPQAVPYPEAK	RGPFELEAFYSDPQAVPYPEAK	3	RGPFELEAFYSDPQAVPYPEAK3	67881.5	87601.6	64867.5
P28075	P28075	PSB5_RAT	Psmb5	Proteasome subunit beta type-5	1	RGPGLYYVDSEGNR	RGPGLYYVDSEGNR	2	RGPGLYYVDSEGNR2	60807.6	56455.1	54955.9
P28075	P28075	PSB5_RAT	Psmb5	Proteasome subunit beta type-5	1	RGPGLYYVDSEGNR	RGPGLYYVDSEGNR	3	RGPGLYYVDSEGNR3	737250	778411	800894
B2RYJ2	B2RYJ2	B2RYJ2_RAT	Dbr1	Debranching RNA lariats 1	1	RGPGPVDLLLCCGDFQAVR	RGPGPVDLLLC(UniMod:4)C(UniMod:4)GDFQAVR	3	RGPGPVDLLLC(UniMod:4)C(UniMod:4)GDFQAVR3	3369.44	4127.36	
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	RGPLSENWIQEYK	RGPLSENWIQEYK	3	RGPLSENWIQEYK3	20412.4	20672.2	22303.1
Q6AYQ9	Q6AYQ9	Q6AYQ9_RAT	Ppic	Peptidyl-prolyl cis-trans isomerase	1	RGPLVTDK	RGPLVTDK	2	RGPLVTDK2	30379.2	30648.1	29048.7
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	RGPLWNHEDVSSK	RGPLWNHEDVSSK	3	RGPLWNHEDVSSK3	16217.5	18528.2	10789.7
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	RGPLWNHEDVSSK	RGPLWNHEDVSSK	4	RGPLWNHEDVSSK4	3042.74	10418.7	4595.37
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	RGPLWNHEDVSSKNPSIK	RGPLWNHEDVSSKNPSIK	4	RGPLWNHEDVSSKNPSIK4	7223.11	6041.03	
Q5XI81	Q5XI81	FXR1_RAT	Fxr1	RNA-binding protein FXR1	1	RGPNYTSGYGTNSELSNPSETESER	RGPNYTSGYGTNSELSNPSETESER	3	RGPNYTSGYGTNSELSNPSETESER3	5592.96	3840.57	1059.68
Q5XI81	Q5XI81	FXR1_RAT	Fxr1	RNA-binding protein FXR1	1	RGPNYTSGYGTNSELSNPSETESERK	RGPNYTSGYGTNSELSNPSETESERK	4	RGPNYTSGYGTNSELSNPSETESERK4	11245.1	17096.3	4871.93
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	RGPPEKEWR	RGPPEKEWR	3	RGPPEKEWR3	10278.3	10973.8	14045.9
B2RYF6	B2RYF6	B2RYF6_RAT	Clptm1	CLPTM1 regulator of GABA type A receptor forward trafficking	1	RGPSPQDQSGPGGAPR	RGPSPQDQSGPGGAPR	3	RGPSPQDQSGPGGAPR3	9262.97		3910.69
P56522	P56522	ADRO_RAT	Fdxr	NADPH:adrenodoxin oxidoreductase, mitochondrial	1	RGPTGVITTTMTDSFLTSQVLLK	RGPTGVITTTMTDSFLTSQVLLK	3	RGPTGVITTTMTDSFLTSQVLLK3	3216.83	5755.68	3376.15
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	RGPTSDSHEALEK	RGPTSDSHEALEK	3	RGPTSDSHEALEK3			4455
D3Z9D0	D3Z9D0	D3Z9D0_RAT	RGD1306271	Similar to KIAA1549 protein	1	RGPVNIIFAVK	RGPVNIIFAVK	3	RGPVNIIFAVK3	11944.3	16229.7	15847.1
P35427	P35427;A0A8I5ZNZ4	RL13A_RAT	Rpl13a	Large ribosomal subunit protein uL13	0	RGQAALER	RGQAALER	2	RGQAALER2			4585.25
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	RGQCVKPLFGAVTK	RGQC(UniMod:4)VKPLFGAVTK	3	RGQC(UniMod:4)VKPLFGAVTK3	21999.9	24909.2	14897
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	RGQCVKPLFGAVTK	RGQC(UniMod:4)VKPLFGAVTK	4	RGQC(UniMod:4)VKPLFGAVTK4	42012.1	50850.1	28623.8
D4ADT7	D4ADT7	D4ADT7_RAT	Nod1	Nucleotide-binding oligomerization domain containing 1	1	RGQHEMEGVPAGCHSHIK	RGQHEMEGVPAGC(UniMod:4)HSHIK	3	RGQHEMEGVPAGC(UniMod:4)HSHIK3		2865.15	
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	RGQIYILPIQVNPVNDPPR	RGQIYILPIQVNPVNDPPR	3	RGQIYILPIQVNPVNDPPR3	15528.7	12443	5487.62
Q6AYU3	Q6AYU3	DNJB6_RAT	Dnajb6	DnaJ homolog subfamily B member 6	1	RGQPTPALAPGPAPAPAR	RGQPTPALAPGPAPAPAR	3	RGQPTPALAPGPAPAPAR3	7160.08	10104.3	6361.52
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	RGQRPDFTDAIILR	RGQRPDFTDAIILR	3	RGQRPDFTDAIILR3	13690	16867.1	12734.3
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	RGQRPDFTDAIILR	RGQRPDFTDAIILR	4	RGQRPDFTDAIILR4	45486.3	49268.2	54081.2
Q62658	Q62658	FKB1A_RAT	Fkbp1a	Peptidyl-prolyl cis-trans isomerase FKBP1A	1	RGQTCVVHYTGMLEDGK	RGQTC(UniMod:4)VVHYTGMLEDGK	3	RGQTC(UniMod:4)VVHYTGMLEDGK3	3526.59	6299.03	4856.66
Q62658	Q62658	FKB1A_RAT	Fkbp1a	Peptidyl-prolyl cis-trans isomerase FKBP1A	1	RGQTCVVHYTGMLEDGK	RGQTC(UniMod:4)VVHYTGMLEDGK	4	RGQTC(UniMod:4)VVHYTGMLEDGK4	6182.73	5576.24	4060.82
Q62658	Q62658	FKB1A_RAT	Fkbp1a	Peptidyl-prolyl cis-trans isomerase FKBP1A	1	RGQTCVVHYTGMLEDGKK	RGQTC(UniMod:4)VVHYTGMLEDGKK	4	RGQTC(UniMod:4)VVHYTGMLEDGKK4	32221.3	34135.5	22596.7
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	RGQTFYIQIDFNRPYDPR	RGQTFYIQIDFNRPYDPR	3	RGQTFYIQIDFNRPYDPR3		107537	
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	RGQTFYIQIDFNRPYDPR	RGQTFYIQIDFNRPYDPR	4	RGQTFYIQIDFNRPYDPR4	66561.7	57687.8	53045.2
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	RGQYEMLSECLER	RGQYEMLSEC(UniMod:4)LER	3	RGQYEMLSEC(UniMod:4)LER3	2608.02	4108.95	2808.77
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	RGSELGGAAGQGGHPPGYTSLASR	RGSELGGAAGQGGHPPGYTSLASR	3	RGSELGGAAGQGGHPPGYTSLASR3	12586.6	24253.5	14676.3
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	RGSELGGAAGQGGHPPGYTSLASR	RGSELGGAAGQGGHPPGYTSLASR	4	RGSELGGAAGQGGHPPGYTSLASR4	84826	84755	92731
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	RGSGDTSISMDTEASIR	RGSGDTSISMDTEASIR	3	RGSGDTSISMDTEASIR3	5790.22	2979.77	5091.34
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	RGSGDTSSLIDPDTSLSELR	RGSGDTSSLIDPDTSLSELR	3	RGSGDTSSLIDPDTSLSELR3	28132.4	26119.4	26922.4
A0A8I6A5F4	A0A8I6A5F4	A0A8I6A5F4_RAT	Tmem40	Transmembrane protein 40	1	RGSGSAEGEVEASQLNR	RGSGSAEGEVEASQLNR	3	RGSGSAEGEVEASQLNR3	24162.2	13060.1	26269.1
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	RGSLLSEPAIQVR	RGSLLSEPAIQVR	3	RGSLLSEPAIQVR3	24973.9	30773.5	38001.3
Q6AYH6	Q6AYH6	EMC10_RAT	Emc10	ER membrane protein complex subunit 10	1	RGSLLWNQQDGTLSATQR	RGSLLWNQQDGTLSATQR	3	RGSLLWNQQDGTLSATQR3	25257.1	23681.1	16755
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	RGSLTLEEK	RGSLTLEEK	2	RGSLTLEEK2	15406	9418.48	6494.62
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	RGSQFGQSCCLR	RGSQFGQSC(UniMod:4)C(UniMod:4)LR	3	RGSQFGQSC(UniMod:4)C(UniMod:4)LR3	11418.2	11520.6	14269.7
O35397	O35397	CASP6_RAT	Casp6	Caspase-6	1	RGTALIFNHER	RGTALIFNHER	3	RGTALIFNHER3		7921.78	
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	RGTDDDRPSWR	RGTDDDRPSWR	2	RGTDDDRPSWR2	2801.2	1975.99	
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	RGTDDDRPSWR	RGTDDDRPSWR	3	RGTDDDRPSWR3	65502.4	63414.7	66040.1
P80067	P80067	CATC_RAT	Ctsc	Dipeptidyl peptidase 1	1	RGTDECAIESIAMAAIPIPK	RGTDEC(UniMod:4)AIESIAMAAIPIPK	3	RGTDEC(UniMod:4)AIESIAMAAIPIPK3	10795.7	12050.2	6860.23
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	RGTEHSGSTVPSILNR	RGTEHSGSTVPSILNR	3	RGTEHSGSTVPSILNR3	24424.4	35622.7	35581.9
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	RGTEHSGSTVPSILNR	RGTEHSGSTVPSILNR	4	RGTEHSGSTVPSILNR4	11836	16304.2	21342.9
P07335	P07335	KCRB_RAT	Ckb	Creatine kinase B-type	1	RGTGGVDTAAVGGVFDVSNADR	RGTGGVDTAAVGGVFDVSNADR	3	RGTGGVDTAAVGGVFDVSNADR3	24749.1	29439.4	34025
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	RGTIGAGPIPIK	RGTIGAGPIPIK	2	RGTIGAGPIPIK2	6513.19	3429.84	4209.61
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	RGTIGAGPIPIK	RGTIGAGPIPIK	3	RGTIGAGPIPIK3	21929.8	19161	27785.6
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	RGTLQSYFD	RGTLQSYFD	2	RGTLQSYFD2	74114.4	78605.8	80086.7
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	RGTLVAER	RGTLVAER	2	RGTLVAER2		143045	
Q9Z2Q7	Q9Z2Q7	STX8_RAT	Stx8	Syntaxin-8	1	RGTPNPWLCEEPEETR	RGTPNPWLC(UniMod:4)EEPEETR	3	RGTPNPWLC(UniMod:4)EEPEETR3	21234.6	14342.2	16357.8
Q1RP74	Q1RP74	Q1RP74_RAT	Tbcb	Tubulin folding cofactor B	1	RGTVMYVGLTDFKPGYWVGVR	RGTVMYVGLTDFKPGYWVGVR	3	RGTVMYVGLTDFKPGYWVGVR3	14326.9	19648.5	13205.7
Q1RP74	Q1RP74	Q1RP74_RAT	Tbcb	Tubulin folding cofactor B	1	RGTVMYVGLTDFKPGYWVGVR	RGTVMYVGLTDFKPGYWVGVR	4	RGTVMYVGLTDFKPGYWVGVR4	61286.2	54643.7	39601.8
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	RGVDPAPLAK	RGVDPAPLAK	2	RGVDPAPLAK2	6676.73	8830.63	6826.13
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	RGVDVEAAK	RGVDVEAAK	2	RGVDVEAAK2		33429.1	
Q8VHE9	Q8VHE9	RETST_RAT	Retsat	All-trans-retinol 13,14-reductase	1	RGVDYETLK	RGVDYETLK	2	RGVDYETLK2	6186.68	6866.75	4396.39
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	RGVFNVQMEPK	RGVFNVQMEPK	2	RGVFNVQMEPK2	23785.4	27836.6	33498.4
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	RGVFNVQMEPK	RGVFNVQMEPK	3	RGVFNVQMEPK3	127628	176406	166743
Q925Q9	Q925Q9	SH3K1_RAT	Sh3kbp1	SH3 domain-containing kinase-binding protein 1	1	RGVFPDNFVK	RGVFPDNFVK	3	RGVFPDNFVK3	11707.6	9197.36	6165.28
Q6IRE4	Q6IRE4	TS101_RAT	Tsg101	Tumor susceptibility gene 101 protein	1	RGVIDLDVFLK	RGVIDLDVFLK	2	RGVIDLDVFLK2	13707.2	9316.95	7479.87
Q6IRE4	Q6IRE4	TS101_RAT	Tsg101	Tumor susceptibility gene 101 protein	1	RGVIDLDVFLK	RGVIDLDVFLK	3	RGVIDLDVFLK3	5210.49	5407.95	7583.4
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	RGVIPNSFDHIFTHISR	RGVIPNSFDHIFTHISR	4	RGVIPNSFDHIFTHISR4	1349.58		4403.86
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	RGVKPSCTIIPLMK	RGVKPSC(UniMod:4)TIIPLMK	3	RGVKPSC(UniMod:4)TIIPLMK3	882.642	3373.29	5078.17
A0A8I6AJP4	A0A8I6AJP4	A0A8I6AJP4_RAT	Phactr4	Phosphatase and actin regulator 4	1	RGVLLEDPEQGGEDSGK	RGVLLEDPEQGGEDSGK	3	RGVLLEDPEQGGEDSGK3	3517.84	1761.27	1892.47
P63039	A0A8I5ZVK6;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	RGVMLAVDAVIAELK	RGVMLAVDAVIAELK	3	RGVMLAVDAVIAELK3	18417.2	21248.8	11555
P63039	A0A8I5ZVK6;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	RGVMLAVDAVIAELKK	RGVMLAVDAVIAELKK	3	RGVMLAVDAVIAELKK3	98197.5	43637.2	38364
P63039	A0A8I5ZVK6;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	RGVMLAVDAVIAELKK	RGVMLAVDAVIAELKK	4	RGVMLAVDAVIAELKK4	18272.9	21378.9	21438.8
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	RGVPTQAK	RGVPTQAK	2	RGVPTQAK2			8943.49
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	RGVTDMIKPDQVEGIQK	RGVTDMIKPDQVEGIQK	3	RGVTDMIKPDQVEGIQK3	1866.45	3861.66	4901.02
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	RGVTDMIKPDQVEGIQK	RGVTDMIKPDQVEGIQK	4	RGVTDMIKPDQVEGIQK4	3940.82	8846.66	6778.11
C9WPN6	C9WPN6	IF2H_RAT	Eif2s3y	Eukaryotic translation initiation factor 2 subunit 3, Y-linked	1	RGVTIKPTIDDE	RGVTIKPTIDDE	3	RGVTIKPTIDDE3	1906.33	11279.8	9194.96
P81795	P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	1	RGVTIKPTVDDD	RGVTIKPTVDDD	2	RGVTIKPTVDDD2	5898.83	6003.96	4162.36
P81795	P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	1	RGVTIKPTVDDD	RGVTIKPTVDDD	3	RGVTIKPTVDDD3	17461.9	19441	16602.7
G3V728	G3V728	G3V728_RAT	Nipsnap1	Nipsnap homolog 1	1	RGWDENVYYTVPLVR	RGWDENVYYTVPLVR	3	RGWDENVYYTVPLVR3	28482.9	21353.6	25743.6
Q5M872	Q5M872;Q5U2X4	DPEP2_RAT	Dpep2	Dipeptidase 2	0	RGWGEQELQGVLR	RGWGEQELQGVLR	3	RGWGEQELQGVLR3	6392.12	9059.03	6915.94
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	RGWLTINNISLMK	RGWLTINNISLMK	3	RGWLTINNISLMK3	22164.3	15933.6	16288.1
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	RGYHANEEGSECVDVNECETGVHR	RGYHANEEGSEC(UniMod:4)VDVNEC(UniMod:4)ETGVHR	3	RGYHANEEGSEC(UniMod:4)VDVNEC(UniMod:4)ETGVHR3	1522.04	849.389	
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	RGYHANEEGSECVDVNECETGVHR	RGYHANEEGSEC(UniMod:4)VDVNEC(UniMod:4)ETGVHR	4	RGYHANEEGSEC(UniMod:4)VDVNEC(UniMod:4)ETGVHR4	30422.3	37978.9	36138.4
D3ZWS6	D3ZWS6	D3ZWS6_RAT	Naa30	N(alpha)-acetyltransferase 30, NatC catalytic subunit	1	RGYIAMLAVDSK	RGYIAMLAVDSK	3	RGYIAMLAVDSK3	4894.42		5357.01
Q5XIN4	Q5XIN4	Q5XIN4_RAT	Mtmr9	Myotubularin related protein 9	1	RGYLIDTR	RGYLIDTR	2	RGYLIDTR2	35354.2	38730.3	25489.6
D3ZUP8	D3ZUP8	D3ZUP8_RAT	Lmbrd2	LMBR1 domain containing 2	1	RGYLLMK	RGYLLMK	2	RGYLLMK2	4629.2	6226.16	
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	RGYSLVSGGTDTHLVLVDLRPK	RGYSLVSGGTDTHLVLVDLRPK	4	RGYSLVSGGTDTHLVLVDLRPK4	49745.7	50789.2	61703
Q2LC84	Q2LC84	NUMB_RAT	Numb	Protein numb homolog	1	RHAPIEQLAR	RHAPIEQLAR	3	RHAPIEQLAR3	35127.4	24574.8	35508.6
A0A096MJ11	A0A096MJ11	A0A096MJ11_RAT	Gsdmd	Gasdermin D	1	RHDFSLLAVLHSIGER	RHDFSLLAVLHSIGER	3	RHDFSLLAVLHSIGER3	4552.54	7392.9	4677.82
A0A096MJ11	A0A096MJ11	A0A096MJ11_RAT	Gsdmd	Gasdermin D	1	RHDFSLLAVLHSIGER	RHDFSLLAVLHSIGER	4	RHDFSLLAVLHSIGER4	14431.2	23909.7	15481.9
A0A8I5Y224	A0A8I5Y224	A0A8I5Y224_RAT	Adam9	ADAM metallopeptidase domain 9	1	RHDSAQLVLK	RHDSAQLVLK	3	RHDSAQLVLK3	6197.34	4887.44	
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	RHDSTEPSSTSSSSDPILDFNISLAVAK	RHDSTEPSSTSSSSDPILDFNISLAVAK	4	RHDSTEPSSTSSSSDPILDFNISLAVAK4	25742.8	30502.6	15225
G3V6S0	G3V6S0;A0A8I6AWM3	G3V6S0_RAT	Sptbn1	Spectrin beta chain	0	RHEAFEK	RHEAFEK	2	RHEAFEK2			19563.5
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	RHEATVPSLGAVLEELQR	RHEATVPSLGAVLEELQR	3	RHEATVPSLGAVLEELQR3	210232	233664	248215
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	RHEATVPSLGAVLEELQR	RHEATVPSLGAVLEELQR	4	RHEATVPSLGAVLEELQR4	279717	298127	328839
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	RHEEGHMLNCTCFGQGR	RHEEGHMLNC(UniMod:4)TC(UniMod:4)FGQGR	3	RHEEGHMLNC(UniMod:4)TC(UniMod:4)FGQGR3	43565.5	57341.3	22012.4
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	RHEEGHMLNCTCFGQGR	RHEEGHMLNC(UniMod:4)TC(UniMod:4)FGQGR	4	RHEEGHMLNC(UniMod:4)TC(UniMod:4)FGQGR4	760956	934321	752907
A0A8I5ZXB9	A0A8I5ZXB9	A0A8I5ZXB9_RAT	Kifap3	Kinesin-associated protein 3	1	RHELWQEELSK	RHELWQEELSK	3	RHELWQEELSK3	33107.9	28203.5	37338.1
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	RHEMPPHIYAITDTAYR	RHEMPPHIYAITDTAYR	3	RHEMPPHIYAITDTAYR3	1.03282e+06	1.25749e+06	1.18299e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	RHEMPPHIYAITDTAYR	RHEMPPHIYAITDTAYR	4	RHEMPPHIYAITDTAYR4	2.12893e+06	2.86554e+06	2.59032e+06
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	RHENSSIVQAVCALLNSGGGVIK	RHENSSIVQAVC(UniMod:4)ALLNSGGGVIK	3	RHENSSIVQAVC(UniMod:4)ALLNSGGGVIK3	24112.4	7138.21	20518.6
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	RHENSSIVQAVCALLNSGGGVIK	RHENSSIVQAVC(UniMod:4)ALLNSGGGVIK	4	RHENSSIVQAVC(UniMod:4)ALLNSGGGVIK4	10696.4	16733.1	44735.5
Q4QQV3	Q4QQV3	F162A_RAT	Fam162a	Protein FAM162A	1	RHESLTSLNLER	RHESLTSLNLER	3	RHESLTSLNLER3	3259.97	5490.54	1921.95
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	RHEVEQQNIR	RHEVEQQNIR	3	RHEVEQQNIR3			29077.6
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	RHEVEQQNIREELNK	RHEVEQQNIREELNK	4	RHEVEQQNIREELNK4	40492.1	47792.5	41916.1
A0A8I6AJ04	A0A8I6AJ04	A0A8I6AJ04_RAT	Pithd1	PITH domain containing 1	1	RHEVTICNYEASANPADHR	RHEVTIC(UniMod:4)NYEASANPADHR	4	RHEVTIC(UniMod:4)NYEASANPADHR4	6793.06		
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	RHFTDLVAIQNK	RHFTDLVAIQNK	2	RHFTDLVAIQNK2	9923.87	8901.87	5085.37
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	RHFTDLVAIQNK	RHFTDLVAIQNK	3	RHFTDLVAIQNK3	401897	426763	437200
A0A8J8YFS5	A0A8J8YFS5	A0A8J8YFS5_RAT	Hars1	Histidine--tRNA ligase, cytoplasmic	1	RHGAEVIDTPVFELK	RHGAEVIDTPVFELK	3	RHGAEVIDTPVFELK3	15091	10405.8	14366.7
D3ZSY8	D3ZSY8	D3ZSY8_RAT	Tbc1d10b	TBC1 domain family, member 10b	1	RHGASAAPSPPPR	RHGASAAPSPPPR	3	RHGASAAPSPPPR3			2993.61
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	RHGESICLSPCNTLAAVTDDFGR	RHGESIC(UniMod:4)LSPC(UniMod:4)NTLAAVTDDFGR	4	RHGESIC(UniMod:4)LSPC(UniMod:4)NTLAAVTDDFGR4	19316.3	13889.7	14064.3
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	RHGGKPVNAGVGR	RHGGKPVNAGVGR	3	RHGGKPVNAGVGR3			8218.16
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	RHGVQECILLVTQR	RHGVQEC(UniMod:4)ILLVTQR	3	RHGVQEC(UniMod:4)ILLVTQR3	18604.8	21003.9	17991.9
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	RHGVQECILLVTQR	RHGVQEC(UniMod:4)ILLVTQR	4	RHGVQEC(UniMod:4)ILLVTQR4	15660.2	32182.6	17138.2
P43253	P43253	PI2R_RAT	Ptgir	Prostacyclin receptor	1	RHHGSFVPTSR	RHHGSFVPTSR	3	RHHGSFVPTSR3	61993.5	73400	75969
P48500	A0A8I5ZVI4;P48500	TPIS_RAT	Tpi1	Triosephosphate isomerase	0	RHIFGESDELIGQK	RHIFGESDELIGQK	3	RHIFGESDELIGQK3	5121.67	6449.26	
P48500	A0A8I5ZVI4;P48500	TPIS_RAT	Tpi1	Triosephosphate isomerase	0	RHIFGESDELIGQK	RHIFGESDELIGQK	4	RHIFGESDELIGQK4	8947.2	3551.69	7080.7
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	RHIFMLTLPTVTESTIDR	RHIFMLTLPTVTESTIDR	3	RHIFMLTLPTVTESTIDR3	7162.13	6276.83	5441.45
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	RHIFMLTLPTVTESTIDRK	RHIFMLTLPTVTESTIDRK	4	RHIFMLTLPTVTESTIDRK4	14171.5	24321.9	10142.8
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	RHISSAGTIESVNLDAIPLAIAR	RHISSAGTIESVNLDAIPLAIAR	3	RHISSAGTIESVNLDAIPLAIAR3	6151.84	8891.52	6662.54
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	RHISSAGTIESVNLDAIPLAIAR	RHISSAGTIESVNLDAIPLAIAR	4	RHISSAGTIESVNLDAIPLAIAR4	35757.7	30387.4	42038.2
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	RHLEEIVHVEQGR	RHLEEIVHVEQGR	3	RHLEEIVHVEQGR3	6672.75	6357.97	3694.4
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	RHLEEIVHVEQGR	RHLEEIVHVEQGR	4	RHLEEIVHVEQGR4	18242.3	28793.3	22807.6
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	RHLELAVPVILR	RHLELAVPVILR	3	RHLELAVPVILR3	104562	116091	101266
P62828	Q8K586;P62828;Q66H11	RAN_RAT	Ran	GTP-binding nuclear protein Ran	0	RHLTGEFEK	RHLTGEFEK	2	RHLTGEFEK2	3454.72	622.065	
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	RHLTYAEFTQFLLEIQLEHAK	RHLTYAEFTQFLLEIQLEHAK	4	RHLTYAEFTQFLLEIQLEHAK4	14181.6	5650.4	9385.27
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	RHLVCNGDQDCLDGSDEDNCDDAR	RHLVC(UniMod:4)NGDQDC(UniMod:4)LDGSDEDNC(UniMod:4)DDAR	3	RHLVC(UniMod:4)NGDQDC(UniMod:4)LDGSDEDNC(UniMod:4)DDAR3	3459.1	1219.32	2505.07
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	RHLVCNGDQDCLDGSDEDNCDDAR	RHLVC(UniMod:4)NGDQDC(UniMod:4)LDGSDEDNC(UniMod:4)DDAR	4	RHLVC(UniMod:4)NGDQDC(UniMod:4)LDGSDEDNC(UniMod:4)DDAR4	7393.61	11155.4	9978.74
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	RHNIVLDEGMMESLMELPEQFNYGMYSK	RHNIVLDEGMMESLMELPEQFNYGMYSK	4	RHNIVLDEGMMESLMELPEQFNYGMYSK4	12983.2	7812.13	14074.8
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	RHPDEPPEDEVFELFPMFMSGLLSAHNR	RHPDEPPEDEVFELFPMFMSGLLSAHNR	4	RHPDEPPEDEVFELFPMFMSGLLSAHNR4	6824.16	7720.89	28481.7
P02770	P02770	ALBU_RAT	Alb	Albumin	1	RHPDYSVSLLLR	RHPDYSVSLLLR	2	RHPDYSVSLLLR2	127654	131282	102625
P02770	P02770	ALBU_RAT	Alb	Albumin	1	RHPDYSVSLLLR	RHPDYSVSLLLR	3	RHPDYSVSLLLR3	611648	417552	354681
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	RHPVVAGGSGEGR	RHPVVAGGSGEGR	3	RHPVVAGGSGEGR3			5357.16
P02770	P02770	ALBU_RAT	Alb	Albumin	1	RHPYFYAPELLYYAEK	RHPYFYAPELLYYAEK	3	RHPYFYAPELLYYAEK3	1.49563e+07	1.73093e+07	1.42315e+07
P02770	P02770	ALBU_RAT	Alb	Albumin	1	RHPYFYAPELLYYAEK	RHPYFYAPELLYYAEK	4	RHPYFYAPELLYYAEK4	8.59714e+06	9.81226e+06	1.00755e+07
P02770	P02770	ALBU_RAT	Alb	Albumin	1	RHPYFYAPELLYYAEKYNEVLTQCCTESDK	RHPYFYAPELLYYAEKYNEVLTQC(UniMod:4)C(UniMod:4)TESDK	4	RHPYFYAPELLYYAEKYNEVLTQC(UniMod:4)C(UniMod:4)TESDK4	19058.6	9870.44	12565.6
A0A8I6AD03	A0A8I6AD03	A0A8I6AD03_RAT	Aplp1	Amyloid beta precursor like protein 1	1	RHQEAQEACSSQGLILHGSGMLLPCGSDR	RHQEAQEAC(UniMod:4)SSQGLILHGSGMLLPC(UniMod:4)GSDR	4	RHQEAQEAC(UniMod:4)SSQGLILHGSGMLLPC(UniMod:4)GSDR4	7900.65	12695.7	7280.32
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	RHSSLIDIESVPTYK	RHSSLIDIESVPTYK	4	RHSSLIDIESVPTYK4	8358.03	4707.45	5207.89
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	RHSSTGDSVDGDAPPGER	RHSSTGDSVDGDAPPGER	2	RHSSTGDSVDGDAPPGER2	573.458		1744.97
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	RHSSTGDSVDGDAPPGER	RHSSTGDSVDGDAPPGER	3	RHSSTGDSVDGDAPPGER3	13419.1		12407.2
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	RHSSTGDSVDGDAPPGERNPEATFLK	RHSSTGDSVDGDAPPGERNPEATFLK	4	RHSSTGDSVDGDAPPGERNPEATFLK4	22585.2	32162.7	26391.7
Q3KR57	Q3KR57	Q3KR57_RAT	Grap2	GRB2-related adaptor protein 2	1	RHTDPVQLQAAGR	RHTDPVQLQAAGR	3	RHTDPVQLQAAGR3	4508.96	1572.84	7520.25
P36953	P36953	AFAM_RAT	Afm	Afamin	1	RHTELSTPELLR	RHTELSTPELLR	3	RHTELSTPELLR3	273305	305320	289380
Q5XIP9	Q5XIP9	TMM43_RAT	Tmem43	Transmembrane protein 43	1	RHVEMYQWVETEESNEYTEDGQVK	RHVEMYQWVETEESNEYTEDGQVK	4	RHVEMYQWVETEESNEYTEDGQVK4	2936.84	326.23	
A0A0G2JWU1	A0A0G2JWU1	A0A0G2JWU1_RAT	LOC500959	Triosephosphate isomerase	1	RHVFGESDELIGQK	RHVFGESDELIGQK	3	RHVFGESDELIGQK3	4723.48		
Q9QZL2	Q9QZL2	CHST3_RAT	Chst3	Carbohydrate sulfotransferase 3	1	RHVLLMATTR	RHVLLMATTR	3	RHVLLMATTR3	30423.5	35113.4	26362.2
Q6IE52	Q6IE52	MUG2_RAT	Mug2	Murinoglobulin-2	1	RHVVLVK	RHVVLVK	2	RHVVLVK2	18860.7	35953.1	21282.7
P62425	P62425;M0R3M3;D3ZU22;A0A8I6AMN7;Q7TQ86;D3ZPL5	RL7A_RAT	Rpl7a	Large ribosomal subunit protein eL8	0	RHWGGNVLGPK	RHWGGNVLGPK	3	RHWGGNVLGPK3	1630.87	5238.1	
Q5M8C6	Q5M8C6	FGL1_RAT	Fgl1	Fibrinogen-like protein 1	1	RHYADCSEIYNDGFK	RHYADC(UniMod:4)SEIYNDGFK	3	RHYADC(UniMod:4)SEIYNDGFK3	7754.33	7527.36	11382.1
Q5M8C6	Q5M8C6	FGL1_RAT	Fgl1	Fibrinogen-like protein 1	1	RHYADCSEIYNDGFK	RHYADC(UniMod:4)SEIYNDGFK	4	RHYADC(UniMod:4)SEIYNDGFK4		7780.55	3006.18
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	RHYEEQMR	RHYEEQMR	2	RHYEEQMR2			2991.72
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	RHYEEQMR	RHYEEQMR	3	RHYEEQMR3			12095.8
P19511	P19511	AT5F1_RAT	Atp5pb	ATP synthase F(0) complex subunit B1, mitochondrial	1	RHYLFDVQR	RHYLFDVQR	3	RHYLFDVQR3	371117	344861	300693
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	RIAAYLFK	RIAAYLFK	2	RIAAYLFK2	25607.2	35611.9	26943
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	RIADISQVYTQNAEMR	RIADISQVYTQNAEMR	3	RIADISQVYTQNAEMR3	19298.8	21657.1	18196.2
Q99NA5	Q99NA5	IDH3A_RAT	Idh3a	Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial	1	RIAEFAFEYAR	RIAEFAFEYAR	3	RIAEFAFEYAR3	10423.3	11782.2	12710.1
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	RIAEMTDIKPILR	RIAEMTDIKPILR	3	RIAEMTDIKPILR3	11773.7	3588.36	8537.35
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	RIAIEDPYSVK	RIAIEDPYSVK	3	RIAIEDPYSVK3	5607.08	5923.93	6581.62
P05426	P05426	RL7_RAT	Rpl7	Large ribosomal subunit protein uL30	1	RIALTDNSLVAR	RIALTDNSLVAR	3	RIALTDNSLVAR3	5856.45	6299.85	6304.89
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	RIANLQTDLSDGLR	RIANLQTDLSDGLR	2	RIANLQTDLSDGLR2	41725.9	46148.9	58360.7
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	RIANLQTDLSDGLR	RIANLQTDLSDGLR	3	RIANLQTDLSDGLR3	1.16083e+06	27765	25455
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	RIASQIK	RIASQIK	2	RIASQIK2	159356	184830	167596
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	RIAVALEIGADLPSSHVIDR	RIAVALEIGADLPSSHVIDR	3	RIAVALEIGADLPSSHVIDR3	7934.85	5057.72	5242.2
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	RIAVALEIGADLPSSHVIDR	RIAVALEIGADLPSSHVIDR	4	RIAVALEIGADLPSSHVIDR4	1927.15	1566.48	3104.45
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	RIAVVGEGR	RIAVVGEGR	2	RIAVVGEGR2	6182.35	5316.49	12153.1
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	RICEMAAYFTHSNLQPVHMILVLR	RIC(UniMod:4)EMAAYFTHSNLQPVHMILVLR	4	RIC(UniMod:4)EMAAYFTHSNLQPVHMILVLR4	7126.9	2952.27	
Q63054	Q63054	ICA69_RAT	Ica1	Islet cell autoantigen 1	1	RICFLSQEENELGK	RIC(UniMod:4)FLSQEENELGK	3	RIC(UniMod:4)FLSQEENELGK3	3891.14		
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	RIDFVLVYEDESK	RIDFVLVYEDESK	2	RIDFVLVYEDESK2		8661.08	6021.02
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	RIDFVLVYEDESK	RIDFVLVYEDESK	3	RIDFVLVYEDESK3	56487.4	65895.7	64439.5
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	RIDLSNNQIAEIAPDAFQGLR	RIDLSNNQIAEIAPDAFQGLR	3	RIDLSNNQIAEIAPDAFQGLR3	6037.94	3081.63	
P21913	P21913	SDHB_RAT	Sdhb	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial	1	RIDTDLGK	RIDTDLGK	2	RIDTDLGK2	89102.3	88998.1	77246.3
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	RIDWDAPTGQPSAPGAR	RIDWDAPTGQPSAPGAR	3	RIDWDAPTGQPSAPGAR3	42042.6	38069.2	38569.5
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	RIEDALDDLVGDVWDFNLDPIALK	RIEDALDDLVGDVWDFNLDPIALK	3	RIEDALDDLVGDVWDFNLDPIALK3		3112.29	3041.49
Q5U1Z2	Q5U1Z2	TPPC3_RAT	Trappc3	Trafficking protein particle complex subunit 3	1	RIEDNLPAGEE	RIEDNLPAGEE	2	RIEDNLPAGEE2	108218	111142	121208
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	RIEEEKPDCTK	RIEEEKPDC(UniMod:4)TK	3	RIEEEKPDC(UniMod:4)TK3			38335.5
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	RIEGDQQ	RIEGDQQ	2	RIEGDQQ2			125235
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	RIEGSGDQVDTLELSGGAR	RIEGSGDQVDTLELSGGAR	3	RIEGSGDQVDTLELSGGAR3	44474	47122.8	47310.7
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	RIEGTVDISVITNGIQATSK	RIEGTVDISVITNGIQATSK	3	RIEGTVDISVITNGIQATSK3	22042.1	15928.3	14094.2
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	RIEIQPK	RIEIQPK	2	RIEIQPK2	40384.6	13338.2	
A0A8I5ZQ10	A0A8I5ZQ10	A0A8I5ZQ10_RAT	Naa50	N(alpha)-acetyltransferase 50, NatE catalytic subunit	1	RIEPADAHVLQK	RIEPADAHVLQK	3	RIEPADAHVLQK3	10318.8	4336.88	2640.07
Q5U1Z9	Q5U1Z9	Q5U1Z9_RAT	Mtx2	Metaxin 2	1	RIEQDYFEDR	RIEQDYFEDR	2	RIEQDYFEDR2	5661.49	9061.85	
Q5U1Z9	Q5U1Z9	Q5U1Z9_RAT	Mtx2	Metaxin 2	1	RIEQDYFEDR	RIEQDYFEDR	3	RIEQDYFEDR3	51332.8	45773.9	47535.4
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	RIEVEQALAHPYLEQYYDPSDEPIAEAPFK	RIEVEQALAHPYLEQYYDPSDEPIAEAPFK	4	RIEVEQALAHPYLEQYYDPSDEPIAEAPFK4	59575	73767.3	52243.4
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	RIEVSMSSVK	RIEVSMSSVK	2	RIEVSMSSVK2	30093.2	36839.2	33548.5
Q8R553	Q8R553	CSTN3_RAT	Clstn3	Calsyntenin-3	1	RIEYAPGAGSLALFPGIR	RIEYAPGAGSLALFPGIR	3	RIEYAPGAGSLALFPGIR3	11079.8	13936.8	10226.1
D3ZUP5	D3ZUP5	D3ZUP5_RAT	Brk1	BRICK1 subunit of SCAR/WAVE actin nucleating complex	1	RIEYIEAR	RIEYIEAR	2	RIEYIEAR2	47798.3	46636.6	50862.8
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	RIFHTVTTTDDPVIR	RIFHTVTTTDDPVIR	3	RIFHTVTTTDDPVIR3	19141.2	30585.2	30369.1
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	RIFHTVTTTDDPVIR	RIFHTVTTTDDPVIR	4	RIFHTVTTTDDPVIR4	25600.7	39174.9	31265.7
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	RIFHTVTTTDDPVIRK	RIFHTVTTTDDPVIRK	3	RIFHTVTTTDDPVIRK3	4318.45		5182.72
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	RIFHTVTTTDDPVIRK	RIFHTVTTTDDPVIRK	4	RIFHTVTTTDDPVIRK4	43426.8	41112.4	41482.7
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	RIFPSVIK	RIFPSVIK	2	RIFPSVIK2	14490.2	16263.3	
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	RIFQIHTSR	RIFQIHTSR	3	RIFQIHTSR3	60758.8	52327.1	58134
P15650	P15650	ACADL_RAT	Acadl	Long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	RIFSSEHDIFR	RIFSSEHDIFR	3	RIFSSEHDIFR3	11693.7	11729.3	10482.2
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	RIFSTSADLSELSAVAR	RIFSTSADLSELSAVAR	2	RIFSTSADLSELSAVAR2	14158.9	15945.9	20978.8
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	RIFSTSADLSELSAVAR	RIFSTSADLSELSAVAR	3	RIFSTSADLSELSAVAR3	408667	535574	613688
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	RIGDPPQALPEEPMEVQGAER	RIGDPPQALPEEPMEVQGAER	3	RIGDPPQALPEEPMEVQGAER3	35338.9	33515.3	39127.4
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	RIGIFGQDEDVTSK	RIGIFGQDEDVTSK	2	RIGIFGQDEDVTSK2	6698.38	3401.15	4518.1
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	RIGIFGQDEDVTSK	RIGIFGQDEDVTSK	3	RIGIFGQDEDVTSK3	78168.3	106132	93569.7
A2RRU1	A2RRU1	GYS1_RAT	Gys1	Glycogen [starch] synthase, muscle	1	RIGLFNSSADR	RIGLFNSSADR	3	RIGLFNSSADR3	5894.52	12799.4	7158.91
Q9ESC1	Q9ESC1	AGRL4_RAT	Adgrl4	Adhesion G protein-coupled receptor L4	1	RIGPITEQLTLLHEIYK	RIGPITEQLTLLHEIYK	3	RIGPITEQLTLLHEIYK3	11340.2	10733	11060.1
Q9ESC1	Q9ESC1	AGRL4_RAT	Adgrl4	Adhesion G protein-coupled receptor L4	1	RIGPITEQLTLLHEIYK	RIGPITEQLTLLHEIYK	4	RIGPITEQLTLLHEIYK4	10377.7	12422.7	13082.1
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	RIGYLGAMLLLDER	RIGYLGAMLLLDER	3	RIGYLGAMLLLDER3		17073.9	8193.1
Q3MIF4	Q3MIF4	XYLB_RAT	Xylb	Xylulose kinase	1	RIHAEGLGYR	RIHAEGLGYR	3	RIHAEGLGYR3	4104.97		
F1M8V2	F1M8V2	F1M8V2_RAT	Ube4b	Ubiquitin conjugation factor E4	1	RIHEVQEEMK	RIHEVQEEMK	3	RIHEVQEEMK3		12785.8	9048.41
D4A4T0	D4A4T0	D4A4T0_RAT	Stub1	STIP1 homology and U-box containing protein 1	1	RIHQESELHSYLTR	RIHQESELHSYLTR	4	RIHQESELHSYLTR4	4588.95	3003.46	6608.94
Q5XI64	Q5XI64	ABHD6_RAT	Abhd6	Monoacylglycerol lipase ABHD6	1	RIHQFVECLK	RIHQFVEC(UniMod:4)LK	3	RIHQFVEC(UniMod:4)LK3	17216.7	14322.6	14581.9
P97697	P97697	IMPA1_RAT	Impa1	Inositol monophosphatase 1	1	RIIAASNIALAER	RIIAASNIALAER	3	RIIAASNIALAER3	3641.21	5070.78	3671.63
P08650	P08650	CO5_RAT	C5	Complement C5	1	RIIACASYKPSK	RIIAC(UniMod:4)ASYKPSK	3	RIIAC(UniMod:4)ASYKPSK3	147835	103520	69060.6
Q62639	Q62639	RHEB_RAT	Rheb	GTP-binding protein Rheb	1	RIILEAEK	RIILEAEK	2	RIILEAEK2	8074.75	11871.3	9730.54
B2GV55	B2GV55	B2GV55_RAT	Ube2q1	Ubiquitin conjugating enzyme E2 Q1	1	RIISDLCK	RIISDLC(UniMod:4)K	2	RIISDLC(UniMod:4)K2	3509.8	5288.95	
A0A8I5ZQZ1	A0A8I5ZQZ1	A0A8I5ZQZ1_RAT	Nufip2	Nuclear FMR1 interacting protein 2	1	RIITYNEAMDSPDQ	RIITYNEAMDSPDQ	2	RIITYNEAMDSPDQ2	6165.03	11735.6	
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	RILAPYVGGWGESNGAVIK	RILAPYVGGWGESNGAVIK	3	RILAPYVGGWGESNGAVIK3	5886.67	3854.18	14852.9
Q91Y81	Q91Y81	SEPT2_RAT	Septin2	Septin-2	1	RILDEIEEHSIK	RILDEIEEHSIK	3	RILDEIEEHSIK3	29271.8	29180.4	27079
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	RILDSNK	RILDSNK	2	RILDSNK2	9529.77	14523.9	7023.74
P85971	P85971	6PGL_RAT	Pgls	6-phosphogluconolactonase	1	RILEDQESALPAAMVQPR	RILEDQESALPAAMVQPR	3	RILEDQESALPAAMVQPR3	8636.51	12593.5	10260.8
O70377	O70377	SNP23_RAT	Snap23	Synaptosomal-associated protein 23	1	RILGLAIESQDAGIK	RILGLAIESQDAGIK	3	RILGLAIESQDAGIK3	26541.7	24345.9	25886.6
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	RILGLLAAMLPPIK	RILGLLAAMLPPIK	3	RILGLLAAMLPPIK3	22367.5	16172.1	20276.6
Q68FR6	A0A8I6AKG3;Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	0	RILGLLDTHLK	RILGLLDTHLK	2	RILGLLDTHLK2	12666.3	4927.96	12082.5
Q68FR6	A0A8I6AKG3;Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	0	RILGLLDTHLK	RILGLLDTHLK	3	RILGLLDTHLK3	333751	356952	356843
Q5PQX0	Q5PQX0	UXS1_RAT	Uxs1	UDP-glucuronic acid decarboxylase 1	1	RILITGGAGFVGSHLTDK	RILITGGAGFVGSHLTDK	3	RILITGGAGFVGSHLTDK3	2850.27	1418.35	
A0A8I5ZQG6	A0A8I5ZQG6	A0A8I5ZQG6_RAT	Sez6l2	Seizure related 6 homolog like 2	1	RILLQVEILNVR	RILLQVEILNVR	3	RILLQVEILNVR3	2084.92	1787.58	2737.25
P84100	F1M5A9;P84100	RL19_RAT	Rpl19	Large ribosomal subunit protein eL19	0	RILMEHIHK	RILMEHIHK	3	RILMEHIHK3	5363.22		
P68182	P68182	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	1	RILQAVEFPFLVR	RILQAVEFPFLVR	3	RILQAVEFPFLVR3	15083.6	19570.8	13787.3
P27791	P27791	KAPCA_RAT	Prkaca	cAMP-dependent protein kinase catalytic subunit alpha	1	RILQAVNFPFLVK	RILQAVNFPFLVK	3	RILQAVNFPFLVK3	31543.8	29077.3	21725.8
P82471	P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	1	RINDEIER	RINDEIER	2	RINDEIER2	84730	65814.2	56324.3
A0A8I6ACK9	A0A8I6ACK9	A0A8I6ACK9_RAT	Abcg3l3	ATP-binding cassette, subfamily G (WHITE), member 3-like 3	1	RINEVLELLHLEK	RINEVLELLHLEK	3	RINEVLELLHLEK3	9819.12	8109.47	
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	RINTLQAIWMMDPK	RINTLQAIWMMDPK	3	RINTLQAIWMMDPK3	3198.07	10741.1	5471.46
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	RIPAVIYR	RIPAVIYR	2	RIPAVIYR2		2251.6	
A0A0G2K9K4	A0A0G2K9K4	A0A0G2K9K4_RAT	Tfg	Trafficking from ER to golgi regulator	1	RIPIHNEDITYDELVLMMQR	RIPIHNEDITYDELVLMMQR	3	RIPIHNEDITYDELVLMMQR3	10580.1	20449	8029.52
A0A0G2K9K4	A0A0G2K9K4	A0A0G2K9K4_RAT	Tfg	Trafficking from ER to golgi regulator	1	RIPIHNEDITYDELVLMMQR	RIPIHNEDITYDELVLMMQR	4	RIPIHNEDITYDELVLMMQR4	27914.7	27890.9	34431.3
Q68FY0	Q68FY0	QCR1_RAT	Uqcrc1	Cytochrome b-c1 complex subunit 1, mitochondrial	1	RIPLAEWESR	RIPLAEWESR	2	RIPLAEWESR2	9535.79	7521.19	8861.37
Q68FY0	Q68FY0	QCR1_RAT	Uqcrc1	Cytochrome b-c1 complex subunit 1, mitochondrial	1	RIPLAEWESR	RIPLAEWESR	3	RIPLAEWESR3	225535	209123	251513
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	RIPLSVCFPEYK	RIPLSVC(UniMod:4)FPEYK	2	RIPLSVC(UniMod:4)FPEYK2	21159.1	37565.5	32115.8
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	RIPLSVCFPEYK	RIPLSVC(UniMod:4)FPEYK	3	RIPLSVC(UniMod:4)FPEYK3	238396	238300	290983
Q924S1	Q924S1	PLCD_RAT	Agpat4	1-acyl-sn-glycerol-3-phosphate acyltransferase delta	1	RIPMEDIPEDEDK	RIPMEDIPEDEDK	3	RIPMEDIPEDEDK3	15464.3	29226.1	19032.7
P62815	P62815	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	1	RIPQSTLSEFYPR	RIPQSTLSEFYPR	3	RIPQSTLSEFYPR3	19758.6	22378.7	11961.2
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	RIPSSQTESETSPGFPER	RIPSSQTESETSPGFPER	3	RIPSSQTESETSPGFPER3	53377.8	85470.3	58551.4
P11497	E9PSQ0;P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	0	RIPVQAVWAGWGHASENPK	RIPVQAVWAGWGHASENPK	4	RIPVQAVWAGWGHASENPK4	4726.42	3414.64	
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	RIQAEVEAQLAR	RIQAEVEAQLAR	3	RIQAEVEAQLAR3	5732.36	4879.7	6635.02
Q5PQS4	Q5PQS4	GULP1_RAT	Gulp1	PTB domain-containing engulfment adapter protein 1	1	RIQDLETENMELK	RIQDLETENMELK	3	RIQDLETENMELK3	3890.52	1403.18	1171.37
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	RIQEEMEKER	RIQEEMEKER	3	RIQEEMEKER3	3156.48	2892.03	5590.21
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	RIQEITEQLDITTSEYEK	RIQEITEQLDITTSEYEK	3	RIQEITEQLDITTSEYEK3	11362.3	11435	6062.41
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	RIQEITEQLDITTSEYEKEK	RIQEITEQLDITTSEYEKEK	3	RIQEITEQLDITTSEYEKEK3	15164.6	13519.5	12201
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	RIQEITEQLDITTSEYEKEK	RIQEITEQLDITTSEYEKEK	4	RIQEITEQLDITTSEYEKEK4	33228.9	52416.6	38889.4
Q7TP42	Q7TP42	Q7TP42_RAT	Sec62	Translocation protein SEC62	1	RIQEVGEPSKEEK	RIQEVGEPSKEEK	2	RIQEVGEPSKEEK2	4732.76	4499.28	4428.96
Q7TP42	Q7TP42	Q7TP42_RAT	Sec62	Translocation protein SEC62	1	RIQEVGEPSKEEK	RIQEVGEPSKEEK	3	RIQEVGEPSKEEK3	95820	90420.2	84436.6
Q7TP42	Q7TP42	Q7TP42_RAT	Sec62	Translocation protein SEC62	1	RIQEVGEPSKEEK	RIQEVGEPSKEEK	4	RIQEVGEPSKEEK4	52835.4	71491.3	83178.2
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	RIQFPIEMSMPWILTDHILETK	RIQFPIEMSMPWILTDHILETK	4	RIQFPIEMSMPWILTDHILETK4	7308.22	8725.95	12336
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	RIQGIEEYK	RIQGIEEYK	2	RIQGIEEYK2	7944.85	13095.3	9983
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	RIQGIEEYKK	RIQGIEEYKK	3	RIQGIEEYKK3	18384	12451.1	10674.6
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	RIQLEPLPPLTPK	RIQLEPLPPLTPK	3	RIQLEPLPPLTPK3	6330.15	8437.21	7878.51
Q63610	Q63610;P58775;P09495;P04692	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	0	RIQLVEEELDR	RIQLVEEELDR	2	RIQLVEEELDR2	155598	148099	109598
Q63610	Q63610;P58775;P09495;P04692	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	0	RIQLVEEELDR	RIQLVEEELDR	3	RIQLVEEELDR3	3.82651e+06	4.22732e+06	4.03909e+06
Q63610	Q63610;P58775;P09495;P04692	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	0	RIQLVEEELDRAQER	RIQLVEEELDRAQER	2	RIQLVEEELDRAQER2	6206.43	10251.1	9461.15
Q63610	Q63610;P58775;P09495;P04692	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	0	RIQLVEEELDRAQER	RIQLVEEELDRAQER	3	RIQLVEEELDRAQER3	201921	226385	291803
Q63610	Q63610;P58775;P09495;P04692	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	0	RIQLVEEELDRAQER	RIQLVEEELDRAQER	4	RIQLVEEELDRAQER4	699601	901943	939509
Q4KM73	Q4KM73	KCY_RAT	Cmpk1	UMP-CMP kinase	1	RIQTYLESTKPIIDLYEEMGK	RIQTYLESTKPIIDLYEEMGK	4	RIQTYLESTKPIIDLYEEMGK4	12013.3	7176.78	5790.01
B2RZ27	B2RZ27	SH3L3_RAT	Sh3bgrl3	SH3 domain-binding glutamic acid-rich-like protein 3	1	RIQYQLVDISQDNALR	RIQYQLVDISQDNALR	3	RIQYQLVDISQDNALR3	14235.8	19335.2	19220.5
B2RZ27	B2RZ27	SH3L3_RAT	Sh3bgrl3	SH3 domain-binding glutamic acid-rich-like protein 3	1	RIQYQLVDISQDNALRDEMR	RIQYQLVDISQDNALRDEMR	3	RIQYQLVDISQDNALRDEMR3	5547.14	6024.05	9639.68
B2RZ27	B2RZ27	SH3L3_RAT	Sh3bgrl3	SH3 domain-binding glutamic acid-rich-like protein 3	1	RIQYQLVDISQDNALRDEMR	RIQYQLVDISQDNALRDEMR	4	RIQYQLVDISQDNALRDEMR4	37183	41909.2	72341.3
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	RISATSIFFESMPYK	RISATSIFFESMPYK	3	RISATSIFFESMPYK3	16165.4	11283.8	12842.5
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	RISEMEEELK	RISEMEEELK	2	RISEMEEELK2	7875.16	4608.59	
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	RISEMEEELK	RISEMEEELK	3	RISEMEEELK3	6001.04	1807.58	11528.6
P85108	P69897;Q4QRB4;Q6P9T8;B4F7C2;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	RISEQFTAMFR	RISEQFTAMFR	2	RISEQFTAMFR2	30827.8	23545.5	25199.8
P85108	P69897;Q4QRB4;Q6P9T8;B4F7C2;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	RISEQFTAMFR	RISEQFTAMFR	3	RISEQFTAMFR3	260198	298054	315762
P62804	P62804	H4_RAT	H4c16	Histone H4	1	RISGLIYEETR	RISGLIYEETR	2	RISGLIYEETR2	5208.11	2155.77	
P62804	P62804	H4_RAT	H4c16	Histone H4	1	RISGLIYEETR	RISGLIYEETR	3	RISGLIYEETR3	49238.9	12172.8	13486.1
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	RISHEGSPVKPIAVR	RISHEGSPVKPIAVR	4	RISHEGSPVKPIAVR4	6008.7	12169.2	12646.2
B1WBV4	B1WBV4	B1WBV4_RAT	Plekhf2	Pleckstrin homology and FYVE domain containing 2	1	RISIVESCFGAAGQPLTIPGR	RISIVESC(UniMod:4)FGAAGQPLTIPGR	3	RISIVESC(UniMod:4)FGAAGQPLTIPGR3	27806.5	42538.5	36810.6
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	RISNQVTDSSR	RISNQVTDSSR	2	RISNQVTDSSR2	10957.6		2132.77
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	RISNQVTDSSR	RISNQVTDSSR	3	RISNQVTDSSR3	6225.56		20385.2
Q68FT3	Q68FT3	PYRD2_RAT	Pyroxd2	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2	1	RISQLDTQSPVTK	RISQLDTQSPVTK	3	RISQLDTQSPVTK3	3448.1	2555.53	3833.78
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	RISQVSSGETEYNPGEAR	RISQVSSGETEYNPGEAR	3	RISQVSSGETEYNPGEAR3	3318.08	7199.6	11958
D3ZSC2	D3ZSC2	D3ZSC2_RAT	Pdcd2l	Programmed cell death 2-like	1	RISVCQGQILR	RISVC(UniMod:4)QGQILR	3	RISVC(UniMod:4)QGQILR3	3496.02	10109.2	6165.01
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	RITEVWGIPSPIDTVFTR	RITEVWGIPSPIDTVFTR	3	RITEVWGIPSPIDTVFTR3	61677.5	57986.8	78216.1
P58751	P58751	RELN_RAT	Reln	Reelin	1	RITIQLPDHVSSSATQFR	RITIQLPDHVSSSATQFR	4	RITIQLPDHVSSSATQFR4	10813.3	17078.9	7509.91
O70377	O70377	SNP23_RAT	Snap23	Synaptosomal-associated protein 23	1	RITNDAREDEMEENLTQVGSILGNLK	RITNDAREDEMEENLTQVGSILGNLK	4	RITNDAREDEMEENLTQVGSILGNLK4	85152.5	94201.5	93084.2
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	RITSDFR	RITSDFR	2	RITSDFR2	160421	147213	162332
P06765	P06765	PLF4_RAT	Pf4	Platelet factor 4	1	RITSLEVIK	RITSLEVIK	2	RITSLEVIK2	3.14957e+06	3.08174e+06	3.37953e+06
P06765	P06765	PLF4_RAT	Pf4	Platelet factor 4	1	RITSLEVIKAGPHCAVPQLIATLK	RITSLEVIKAGPHC(UniMod:4)AVPQLIATLK	4	RITSLEVIKAGPHC(UniMod:4)AVPQLIATLK4	7010.9	7056.53	11301.3
P34064	P34064	PSA5_RAT	Psma5	Proteasome subunit alpha type-5	1	RITSPLMEPSSIEK	RITSPLMEPSSIEK	2	RITSPLMEPSSIEK2	27394.1	22130.5	22971.4
P34064	P34064	PSA5_RAT	Psma5	Proteasome subunit alpha type-5	1	RITSPLMEPSSIEK	RITSPLMEPSSIEK	3	RITSPLMEPSSIEK3	708717	787243	883532
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	RITYLQNPK	RITYLQNPK	2	RITYLQNPK2	7158.4	8822.34	10866.7
P58751	P58751	RELN_RAT	Reln	Reelin	1	RITYPLPESLMGNPVR	RITYPLPESLMGNPVR	3	RITYPLPESLMGNPVR3	24478.7	33293.4	28529.1
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	RITYVVRPGPGLPAGTLPLAGPPR	RITYVVRPGPGLPAGTLPLAGPPR	4	RITYVVRPGPGLPAGTLPLAGPPR4	22316.9	38136.9	29143.1
P62870	P62870;A0A8I6GJ22;A0A8I5ZTT3	ELOB_RAT	Elob	Elongin-B	0	RIVEGILK	RIVEGILK	2	RIVEGILK2	23894	19793	17023.7
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	RIVELPAPADFLSLSSETKPK	RIVELPAPADFLSLSSETKPK	4	RIVELPAPADFLSLSSETKPK4	8315.28	3131.46	10440.9
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	RIVEMEQDNK	RIVEMEQDNK	2	RIVEMEQDNK2	50682	57197.2	54982.5
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	RIVEMEQDNK	RIVEMEQDNK	3	RIVEMEQDNK3	174671	188406	186649
P12075	P12075	COX5B_RAT	Cox5b	Cytochrome c oxidase subunit 5B, mitochondrial	1	RIVGCICEEDNCTVIWFWLHQGESQR	RIVGC(UniMod:4)IC(UniMod:4)EEDNC(UniMod:4)TVIWFWLHQGESQR	4	RIVGC(UniMod:4)IC(UniMod:4)EEDNC(UniMod:4)TVIWFWLHQGESQR4	45062.3	16664.1	23623.2
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	RIVGMIAK	RIVGMIAK	2	RIVGMIAK2		27316.4	20888.4
Q9WTQ2	Q9WTQ2	PODXL_RAT	Podxl	Podocalyxin	1	RIVIETK	RIVIETK	2	RIVIETK2	295136	359011	327963
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	RIVITGDAALDHDQALAQAIR	RIVITGDAALDHDQALAQAIR	4	RIVITGDAALDHDQALAQAIR4	1833.18	2755.71	2527.49
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	RIVITGDADIDHDQVLVQAIK	RIVITGDADIDHDQVLVQAIK	4	RIVITGDADIDHDQVLVQAIK4	20711.1	20498.6	18892.4
A0A8I5ZU57	A0A8I5ZU57;F1M4U0	A0A8I5ZU57_RAT	Ccny	Cyclin Y	0	RIVLGAILLASK	RIVLGAILLASK	3	RIVLGAILLASK3	919.091	984.894	
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	RIVSGIIHHTQSPK	RIVSGIIHHTQSPK	4	RIVSGIIHHTQSPK4	5643.25		11476.3
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	RIVSQLLTLMDGLK	RIVSQLLTLMDGLK	2	RIVSQLLTLMDGLK2	43925.8	26051.3	29375.3
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	RIVSQLLTLMDGLK	RIVSQLLTLMDGLK	3	RIVSQLLTLMDGLK3	166895	113517	182892
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	RIWEPTYTIMYR	RIWEPTYTIMYR	3	RIWEPTYTIMYR3	5320.24		686.829
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	RIWPEPPEEK	RIWPEPPEEK	3	RIWPEPPEEK3	24063.8	37831.7	25034
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	RIYGGFK	RIYGGFK	2	RIYGGFK2	250327	254174	236607
P04640	P04640	OSTCN_RAT	Bglap	Osteocalcin	1	RIYGTTV	RIYGTTV	2	RIYGTTV2	50926.4	58368.5	55348.6
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	RIYGTWEHNMINHLQVFSYFDTK	RIYGTWEHNMINHLQVFSYFDTK	4	RIYGTWEHNMINHLQVFSYFDTK4	16129	13479.7	8898.35
Q793F9	Q793F9	VPS4A_RAT	Vps4a	Vacuolar protein sorting-associated protein 4A	1	RIYIPLPEEAAR	RIYIPLPEEAAR	3	RIYIPLPEEAAR3	14226.8	9678.41	16148.5
P49911	P49911	AN32A_RAT	Anp32a	Acidic leucine-rich nuclear phosphoprotein 32 family member A	1	RIYLELR	RIYLELR	2	RIYLELR2	11943	10668.9	11941
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	RIYQFTAASPK	RIYQFTAASPK	2	RIYQFTAASPK2	69230.3	72775.2	64438.3
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	RIYQFTAASPK	RIYQFTAASPK	3	RIYQFTAASPK3	25886	40805.7	44903.4
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	RIYVFQGEAAEIR	RIYVFQGEAAEIR	3	RIYVFQGEAAEIR3	8898.85	22000.6	19989.9
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	RKDPELWGSVLLESNPYR	RKDPELWGSVLLESNPYR	3	RKDPELWGSVLLESNPYR3	110459	112474	111128
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	RKDPELWGSVLLESNPYR	RKDPELWGSVLLESNPYR	4	RKDPELWGSVLLESNPYR4	287596	310632	341503
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	RKDPSSVDIK	RKDPSSVDIK	2	RKDPSSVDIK2	1907.3	4123.69	
A2RRU1	A2RRU1	GYS1_RAT	Gys1	Glycogen [starch] synthase, muscle	1	RKPDIVTPNGLNVK	RKPDIVTPNGLNVK	3	RKPDIVTPNGLNVK3	23519.2	28010.3	18954.9
P26453	P26453	BASI_RAT	Bsg	Basigin	1	RKPDQTLDEDDPGAAPLK	RKPDQTLDEDDPGAAPLK	3	RKPDQTLDEDDPGAAPLK3	38847.2	32622.3	47871.1
P26453	P26453	BASI_RAT	Bsg	Basigin	1	RKPDQTLDEDDPGAAPLK	RKPDQTLDEDDPGAAPLK	4	RKPDQTLDEDDPGAAPLK4	27047.2	22937.4	28420.6
O35763	O35763;P31977;Q5PQK5	MOES_RAT	Msn	Moesin	0	RKPDTIEVQQMK	RKPDTIEVQQMK	2	RKPDTIEVQQMK2	2480.83	696.312	885.677
O35763	O35763;P31977;Q5PQK5	MOES_RAT	Msn	Moesin	0	RKPDTIEVQQMK	RKPDTIEVQQMK	3	RKPDTIEVQQMK3	300757	250658	261781
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	RKPFQANNVSLSNLVK	RKPFQANNVSLSNLVK	3	RKPFQANNVSLSNLVK3	11962.6	12471.3	13716.7
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	RKPFQANNVSLSNLVK	RKPFQANNVSLSNLVK	4	RKPFQANNVSLSNLVK4	16252.5	12074.9	25863.6
A0A8I5ZV77	A0A8I6A554;A0A8I5ZV77	A0A8I5ZV77_RAT	Mrps36	Mitochondrial ribosomal protein S36	0	RKPMSQEEMEFIQR	RKPMSQEEMEFIQR	3	RKPMSQEEMEFIQR3	10904.3	13302.2	17265.6
A0A8I5ZV77	A0A8I6A554;A0A8I5ZV77	A0A8I5ZV77_RAT	Mrps36	Mitochondrial ribosomal protein S36	0	RKPMSQEEMEFIQR	RKPMSQEEMEFIQR	4	RKPMSQEEMEFIQR4	17963.5	24321.5	12065.7
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	RKPPHGVVPR	RKPPHGVVPR	3	RKPPHGVVPR3			8214.16
A0A8I6G9F8	A0A8I6G9F8	A0A8I6G9F8_RAT	Wdr59	WD repeat domain 59	1	RKPSTAVEYLAAHLSK	RKPSTAVEYLAAHLSK	4	RKPSTAVEYLAAHLSK4		5508.13	2808.07
B2RZ33	B2RZ33	B2RZ33_RAT	Nck1	Cytoplasmic protein	1	RKPSVPDTASPADDSFVDPGER	RKPSVPDTASPADDSFVDPGER	3	RKPSVPDTASPADDSFVDPGER3	11291.2	9467.01	5897.39
B2RZ33	B2RZ33	B2RZ33_RAT	Nck1	Cytoplasmic protein	1	RKPSVPDTASPADDSFVDPGER	RKPSVPDTASPADDSFVDPGER	4	RKPSVPDTASPADDSFVDPGER4	24341.5	19636.8	22900
B2RZ72	B2RZ72	B2RZ72_RAT	Arpc4	Actin-related protein 2/3 complex subunit 4	1	RKPVEGYDISFLITNFHTEQMYK	RKPVEGYDISFLITNFHTEQMYK	3	RKPVEGYDISFLITNFHTEQMYK3	5692.28	3109.18	
B2RZ72	B2RZ72	B2RZ72_RAT	Arpc4	Actin-related protein 2/3 complex subunit 4	1	RKPVEGYDISFLITNFHTEQMYK	RKPVEGYDISFLITNFHTEQMYK	4	RKPVEGYDISFLITNFHTEQMYK4	216532	218589	228348
B5DEI0	B5DEI0	B5DEI0_RAT	Pcyox1l	Pcyox1l protein	1	RKQPQEAAVWR	RKQPQEAAVWR	3	RKQPQEAAVWR3	9610.36	14164.5	20175.1
B2RZB5	B2RZB5	B2RZB5_RAT	Chmp2a	Charged multivesicular body protein 2A	1	RKTPEELLR	RKTPEELLR	3	RKTPEELLR3	8131.87	4702.79	3196.06
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	RKTPVTVTLK	RKTPVTVTLK	3	RKTPVTVTLK3	46098.3	54559	64419.2
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	RLAADFSVPLIIDIK	RLAADFSVPLIIDIK	3	RLAADFSVPLIIDIK3	3167.6	6697.4	
Q4KLN3	Q4KLN3	Q4KLN3_RAT	Srpk1	SRSF protein kinase 1	1	RLAAEATEWQR	RLAAEATEWQR	3	RLAAEATEWQR3		1558.96	2549.89
B0BNI5	B0BNI5	OLFL3_RAT	Olfml3	Olfactomedin-like protein 3	1	RLAALEER	RLAALEER	2	RLAALEER2	4568.15	4449.13	8987.94
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	RLAAYLLLMR	RLAAYLLLMR	2	RLAAYLLLMR2	7275.75	4805.98	4663.19
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	RLAAYLLLMR	RLAAYLLLMR	3	RLAAYLLLMR3	816150	1.11181e+06	1.10849e+06
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	RLAESSVDLNLK	RLAESSVDLNLK	3	RLAESSVDLNLK3	7380.3	8106.36	13556.8
Q10473	Q10473;Q6UE39	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	0	RLAEVWMDEFK	RLAEVWMDEFK	3	RLAEVWMDEFK3	30477.1	9418.84	18689.6
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	RLAGGDWFTSR	RLAGGDWFTSR	3	RLAGGDWFTSR3	14744.1	51432.2	53291.1
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	RLAHCEELR	RLAHC(UniMod:4)EELR	3	RLAHC(UniMod:4)EELR3	43359.6	61983.6	69100.8
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	RLAISEDHVASVK	RLAISEDHVASVK	3	RLAISEDHVASVK3	2711.39	7780.51	7894.31
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	RLALGQLQRP	RLALGQLQRP	3	RLALGQLQRP3	18078	21986.7	19773.1
D4A781	D4A634;D4A781	D4A781_RAT	Ipo5	Importin 5	0	RLANVVR	RLANVVR	2	RLANVVR2	5388.67	9794.68	6971.27
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	RLAPEYEAAATR	RLAPEYEAAATR	2	RLAPEYEAAATR2	2876.9	486.361	
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	RLAPEYEAAATR	RLAPEYEAAATR	3	RLAPEYEAAATR3	424983	393722	459714
M0RD14	M0RD14	M0RD14_RAT	LOC100362738	Pyruvate kinase	1	RLAPITSDPTEAAAVGAVEASFK	RLAPITSDPTEAAAVGAVEASFK	3	RLAPITSDPTEAAAVGAVEASFK3	6697.43	7284.57	6824.37
D3ZGI8	D3ZGI8	D3ZGI8_RAT	Mrm2	Mitochondrial rRNA methyltransferase 2	1	RLAQEFR	RLAQEFR	2	RLAQEFR2	85528.8		85309.4
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	RLAQLQQSSK	RLAQLQQSSK	2	RLAQLQQSSK2			1471.55
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	RLAQLQQSSK	RLAQLQQSSK	3	RLAQLQQSSK3	9871.92	10449	13673.3
P21571	P21571	ATP5J_RAT	Atp5pf	ATP synthase-coupling factor 6, mitochondrial	1	RLASGGPVDTGPEYQQEVDR	RLASGGPVDTGPEYQQEVDR	3	RLASGGPVDTGPEYQQEVDR3	34805.6	21346.9	15942.1
P21571	P21571	ATP5J_RAT	Atp5pf	ATP synthase-coupling factor 6, mitochondrial	1	RLASGGPVDTGPEYQQEVDRELFK	RLASGGPVDTGPEYQQEVDRELFK	4	RLASGGPVDTGPEYQQEVDRELFK4	193360	256969	241056
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	RLATLLGLQAPPTR	RLATLLGLQAPPTR	3	RLATLLGLQAPPTR3	58354.7	51119.9	37896.6
F7EUD8	F7EUD8	F7EUD8_RAT	Trpc6	Transient receptor ion channel domain-containing protein	1	RLATSPSQSELQQDDFYAYDEDGTR	RLATSPSQSELQQDDFYAYDEDGTR	3	RLATSPSQSELQQDDFYAYDEDGTR3	10388.1	5222.47	14820.3
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	RLAVYKAGAQEGAER	RLAVYKAGAQEGAER	3	RLAVYKAGAQEGAER3		2261.27	
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	RLAVYKAGAQEGAER	RLAVYKAGAQEGAER	4	RLAVYKAGAQEGAER4	7447.22	8001.09	8731.21
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	RLAWGQPVGLR	RLAWGQPVGLR	3	RLAWGQPVGLR3	4418.48	4500.56	5257.94
O70593	O70593	SGTA_RAT	Sgta	Small glutamine-rich tetratricopeptide repeat-containing protein alpha	1	RLAYAIIQFLHGQLR	RLAYAIIQFLHGQLR	3	RLAYAIIQFLHGQLR3	8697.44	3017.38	3659.44
P04762	P04762	CATA_RAT	Cat	Catalase	1	RLCENIANHLK	RLC(UniMod:4)ENIANHLK	3	RLC(UniMod:4)ENIANHLK3	7376.76	5962.76	6672.71
P36953	P36953	AFAM_RAT	Afm	Afamin	1	RLCFFYNK	RLC(UniMod:4)FFYNK	2	RLC(UniMod:4)FFYNK2	27566.2	33397.1	28248.6
O35854	O35854	BCAT2_RAT	Bcat2	Branched-chain-amino-acid aminotransferase, mitochondrial	1	RLCLPDFDK	RLC(UniMod:4)LPDFDK	3	RLC(UniMod:4)LPDFDK3	3493.28		4460.11
Q9Z142	Q9Z142	TMM33_RAT	Tmem33	Transmembrane protein 33	1	RLCLQSIAFISR	RLC(UniMod:4)LQSIAFISR	3	RLC(UniMod:4)LQSIAFISR3	8150.02	11455	11213.7
D4AEG7	D4AEG7	D4AEG7_RAT	Tbc1d13	TBC1 domain family, member 13	1	RLCPDISFFQR	RLC(UniMod:4)PDISFFQR	3	RLC(UniMod:4)PDISFFQR3		1241.89	3681.61
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	RLCTLDGK	RLC(UniMod:4)TLDGK	2	RLC(UniMod:4)TLDGK2	16017.1	11223.3	16667.1
Q75WE7	Q75WE7	VWA5A_RAT	Vwa5a	von Willebrand factor A domain-containing protein 5A	1	RLDADLGGTEILTPLR	RLDADLGGTEILTPLR	3	RLDADLGGTEILTPLR3	6095.18	6961.32	8889.85
Q68HB8	Q68HB8	Q68HB8_RAT	Pcdh7	Protocadherin 7	1	RLDAPEGGGGTGPSGR	RLDAPEGGGGTGPSGR	3	RLDAPEGGGGTGPSGR3	1061.29	8701.26	5655.15
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	RLDDTSQEFSK	RLDDTSQEFSK	2	RLDDTSQEFSK2	7501.3	7519.39	6206.51
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	RLDDTSQEFSK	RLDDTSQEFSK	3	RLDDTSQEFSK3	14057.3	8116.74	7151.07
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	RLDEDLAGYCR	RLDEDLAGYC(UniMod:4)R	3	RLDEDLAGYC(UniMod:4)R3	133149	140335	138550
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	RLDEELEDAEK	RLDEELEDAEK	2	RLDEELEDAEK2	42298.1	48126.6	43653.4
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	RLDEELEDAEK	RLDEELEDAEK	3	RLDEELEDAEK3	110497	109314	115174
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	RLDEVVCWLTK	RLDEVVC(UniMod:4)WLTK	2	RLDEVVC(UniMod:4)WLTK2	6897.78	7463.43	
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	RLDEVVCWLTK	RLDEVVC(UniMod:4)WLTK	3	RLDEVVC(UniMod:4)WLTK3	86985	89102.8	84828.9
O35964	O35179;O35964	SH3G1_RAT	Sh3gl1	Endophilin-A2	0	RLDFDYK	RLDFDYK	2	RLDFDYK2	71162.9	73785.2	27767.3
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	RLDFEWTLK	RLDFEWTLK	2	RLDFEWTLK2	22598	25873.8	26110.1
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	RLDFEWTLK	RLDFEWTLK	3	RLDFEWTLK3	57990.6	44548.3	58136.5
Q62763	Q62762;Q62763	KC1G3_RAT	Csnk1g3	Casein kinase I isoform gamma-3	0	RLDFFEKPDYDYLR	RLDFFEKPDYDYLR	4	RLDFFEKPDYDYLR4	11962	16941.4	9303.48
Q62761	Q62761	KC1G1_RAT	Csnk1g1	Casein kinase I isoform gamma-1	1	RLDFFEKPDYEYLR	RLDFFEKPDYEYLR	4	RLDFFEKPDYEYLR4	6838.83	7006.36	4722.67
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	RLDFMAWLGAIQK	RLDFMAWLGAIQK	3	RLDFMAWLGAIQK3	32722.4	36670.7	22339.7
D3ZVB7	D3ZVB7	D3ZVB7_RAT	Ogn	Osteoglycin	1	RLDFTGNLIEDIEDGTFSK	RLDFTGNLIEDIEDGTFSK	3	RLDFTGNLIEDIEDGTFSK3	5335.82	6265.95	2523.08
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	RLDGAINR	RLDGAINR	2	RLDGAINR2		8102.56	5518.57
Q64649	Q64649	KPB1_RAT	Phka1	Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform	1	RLDGALNR	RLDGALNR	2	RLDGALNR2	10398.9		
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	RLDGSVDFK	RLDGSVDFK	2	RLDGSVDFK2	9.05812e+06	8.28416e+06	8.32418e+06
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	RLDGSVDFKK	RLDGSVDFKK	2	RLDGSVDFKK2	169200	6393.51	206756
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	RLDGSVDFKK	RLDGSVDFKK	3	RLDGSVDFKK3	284213	270105	378176
Q5M7U6	Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	1	RLDIAGR	RLDIAGR	2	RLDIAGR2	94186.6	96987.6	95024.1
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	RLDIDEKPLVVQLNWNK	RLDIDEKPLVVQLNWNK	3	RLDIDEKPLVVQLNWNK3	3633.38		
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	RLDIDEKPLVVQLNWNK	RLDIDEKPLVVQLNWNK	4	RLDIDEKPLVVQLNWNK4	12647.9	14181.5	9952.59
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	RLDINTNTYTSQDLK	RLDINTNTYTSQDLK	2	RLDINTNTYTSQDLK2	1969.33	4896.95	
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	RLDINTNTYTSQDLK	RLDINTNTYTSQDLK	3	RLDINTNTYTSQDLK3	76041.2	94049.8	67044.3
Q68A21	Q68A21	PURB_RAT	Purb	Transcriptional activator protein Pur-beta	1	RLDIQNK	RLDIQNK	2	RLDIQNK2	153600	166687	155236
D3ZU83	D3ZU83	D3ZU83_RAT	Ergic3	Endoplasmic reticulum-Golgi intermediate compartment protein	1	RLDKDGIPVSSEAER	RLDKDGIPVSSEAER	3	RLDKDGIPVSSEAER3	4021.07	5822.34	
Q6AYE2	Q6AYE2	SHLB1_RAT	Sh3glb1	Endophilin-B1	1	RLDLDAAK	RLDLDAAK	2	RLDLDAAK2	46496.3	44364.7	46534.3
Q5PPJ9	Q5PPJ9	SHLB2_RAT	Sh3glb2	Endophilin-B2	1	RLDLDACK	RLDLDAC(UniMod:4)K	2	RLDLDAC(UniMod:4)K2	11305.4	4387.01	6543.63
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	RLDLPSNLPGLILSSEHCNK	RLDLPSNLPGLILSSEHC(UniMod:4)NK	3	RLDLPSNLPGLILSSEHC(UniMod:4)NK3	3745.34	5302.7	
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	RLDLPVER	RLDLPVER	2	RLDLPVER2	84684.6	98807	78386.7
A0A8I6AT07	M0R4Q5;A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	0	RLDLTNCTAILK	RLDLTNC(UniMod:4)TAILK	3	RLDLTNC(UniMod:4)TAILK3	5190.98	7170.99	4975.65
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	RLDLTYSFLGSR	RLDLTYSFLGSR	3	RLDLTYSFLGSR3	18886	23847.5	17075.3
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	RLDPDAIPSPIQVIEDDRNNR	RLDPDAIPSPIQVIEDDRNNR	4	RLDPDAIPSPIQVIEDDRNNR4	39889.6	29655.8	34188.8
Q68FS8	Q68FS8	Q68FS8_RAT	Rtca	RNA 3'-terminal-phosphate cyclase (ATP)	1	RLDPINLTDR	RLDPINLTDR	2	RLDPINLTDR2	17279.7	14586.7	
Q68FS8	Q68FS8	Q68FS8_RAT	Rtca	RNA 3'-terminal-phosphate cyclase (ATP)	1	RLDPINLTDR	RLDPINLTDR	3	RLDPINLTDR3	20911.9	26020	31528.4
P17955	P17955	NUP62_RAT	Nup62	Nuclear pore glycoprotein p62	1	RLDQELDFILSQQK	RLDQELDFILSQQK	3	RLDQELDFILSQQK3	12462.5	14182.9	17279
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	RLDQIPEHQR	RLDQIPEHQR	3	RLDQIPEHQR3	1.05151e+06	1.01468e+06	1.12788e+06
Q06647	Q06647	ATPO_RAT	Atp5po	ATP synthase subunit O, mitochondrial	1	RLDQVEK	RLDQVEK	2	RLDQVEK2	105375		90000.1
D4A8G9	D4A8G9	ZFY26_RAT	Zfyve26	Zinc finger FYVE domain-containing protein 26	1	RLDQVVLNPDGMR	RLDQVVLNPDGMR	3	RLDQVVLNPDGMR3	5597.47		
P15650	P15650	ACADL_RAT	Acadl	Long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	RLDSASASMAK	RLDSASASMAK	2	RLDSASASMAK2	18618.7	15034.9	8763.87
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	RLDSEMK	RLDSEMK	2	RLDSEMK2	14784.4	7404.71	10989.5
Q6MG56	Q6MG56	LY66F_RAT	Ly6g6f	Lymphocyte antigen 6 complex locus protein G6f	1	RLDSVTWLEGR	RLDSVTWLEGR	2	RLDSVTWLEGR2	21001.5	13993.7	
Q6MG56	Q6MG56	LY66F_RAT	Ly6g6f	Lymphocyte antigen 6 complex locus protein G6f	1	RLDSVTWLEGR	RLDSVTWLEGR	3	RLDSVTWLEGR3	398601	301404	367266
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	RLDTSSLK	RLDTSSLK	2	RLDTSSLK2	16872.6	22831.4	21426.3
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	RLDVFEK	RLDVFEK	2	RLDVFEK2	77488.9	74508.5	57968.6
Q5FWT1	A0A8I5ZPB4;Q5FWT1;D4AE02	FA98A_RAT	Fam98a	Protein FAM98A	0	RLDVTVQSFGWSDR	RLDVTVQSFGWSDR	3	RLDVTVQSFGWSDR3	6662.08	10515	8391.31
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	RLDVVAGSVTVLSGR	RLDVVAGSVTVLSGR	3	RLDVVAGSVTVLSGR3	39791.6	39665.1	33188.2
Q6MGC4	Q6MGC4	Q6MGC4_RAT	Pfdn6	Prefoldin subunit 6	1	RLDYITAEIK	RLDYITAEIK	2	RLDYITAEIK2	21476.7	17282.7	24754.3
Q6MGC4	Q6MGC4	Q6MGC4_RAT	Pfdn6	Prefoldin subunit 6	1	RLDYITAEIK	RLDYITAEIK	3	RLDYITAEIK3	52172.8	50583.9	58313.3
Q6MGC4	Q6MGC4	Q6MGC4_RAT	Pfdn6	Prefoldin subunit 6	1	RLDYITAEIKR	RLDYITAEIKR	3	RLDYITAEIKR3	9203.24	4506.09	5894.05
Q68FP5	Q68FP5	SPN1_RAT	Snupn	Snurportin-1	1	RLDYVNHAR	RLDYVNHAR	3	RLDYVNHAR3	8482.92	3847.72	
Q6PEC1	Q6PEC1	TBCA_RAT	Tbca	Tubulin-specific chaperone A	1	RLEAAYTDLR	RLEAAYTDLR	3	RLEAAYTDLR3		24265.4	
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	RLEAELAAHEPAIQGVLDTGK	RLEAELAAHEPAIQGVLDTGK	3	RLEAELAAHEPAIQGVLDTGK3	83130.1	73690.2	70027.5
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	RLEAELAAHEPAIQGVLDTGK	RLEAELAAHEPAIQGVLDTGK	4	RLEAELAAHEPAIQGVLDTGK4	609171	720357	684981
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	RLEAELAAHEPAIQGVLDTGKK	RLEAELAAHEPAIQGVLDTGKK	3	RLEAELAAHEPAIQGVLDTGKK3	17616.1	17879.3	26899.3
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	RLEAELAAHEPAIQGVLDTGKK	RLEAELAAHEPAIQGVLDTGKK	4	RLEAELAAHEPAIQGVLDTGKK4	323233	370421	427131
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	RLEAELEAVSR	RLEAELEAVSR	3	RLEAELEAVSR3	61108.3	49089	60364.5
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	RLEAELEAVSRK	RLEAELEAVSRK	3	RLEAELEAVSRK3	2193.56	11278.4	3440.61
Q01986	Q01986;P36506	MP2K1_RAT	Map2k1	Dual specificity mitogen-activated protein kinase kinase 1	0	RLEAFLTQK	RLEAFLTQK	2	RLEAFLTQK2	14054.2	8910.82	7334.01
P16975	P16975	SPRC_RAT	Sparc	SPARC	1	RLEAGDHPVELLAR	RLEAGDHPVELLAR	3	RLEAGDHPVELLAR3	365887	441470	353015
P16975	P16975	SPRC_RAT	Sparc	SPARC	1	RLEAGDHPVELLAR	RLEAGDHPVELLAR	4	RLEAGDHPVELLAR4	246017	287814	267334
Q9JI51	Q9JI51	VTI1A_RAT	Vti1a	Vesicle transport through interaction with t-SNAREs homolog 1A	1	RLEAGYQIAVETEQIGQEMLENLSHDR	RLEAGYQIAVETEQIGQEMLENLSHDR	4	RLEAGYQIAVETEQIGQEMLENLSHDR4	9789.23	10600.4	14606.4
Q9JI51	Q9JI51	VTI1A_RAT	Vti1a	Vesicle transport through interaction with t-SNAREs homolog 1A	1	RLEAGYQIAVETEQIGQEMLENLSHDRER	RLEAGYQIAVETEQIGQEMLENLSHDRER	4	RLEAGYQIAVETEQIGQEMLENLSHDRER4	4010.23	6168.35	5765.6
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	RLECLYDK	RLEC(UniMod:4)LYDK	2	RLEC(UniMod:4)LYDK2	14041.9	15137.8	9352.79
Q63584	Q63584	TMEDA_RAT	Tmed10	Transmembrane emp24 domain-containing protein 10	1	RLEDLSESIVNDFAYMK	RLEDLSESIVNDFAYMK	3	RLEDLSESIVNDFAYMK3	157154	200777	165339
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	RLEDWLGK	RLEDWLGK	2	RLEDWLGK2	13461.5	13667.6	6279.81
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	RLEEAALR	RLEEAALR	2	RLEEAALR2	7829.11	9224.87	3607.4
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	RLEEAPLVTK	RLEEAPLVTK	2	RLEEAPLVTK2	18340	11625.6	8415.13
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	RLEEAPLVTK	RLEEAPLVTK	3	RLEEAPLVTK3	20460.3	23574.7	32747.6
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	RLEEDDMFSVLPEDR	RLEEDDMFSVLPEDR	3	RLEEDDMFSVLPEDR3	68469	61084	67308.8
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	RLEEEFLANAR	RLEEEFLANAR	3	RLEEEFLANAR3	94893.4	99248.2	95034.3
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	RLEEESAQLK	RLEEESAQLK	2	RLEEESAQLK2	10791.9	6373.5	9294.71
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	RLEEESAQLK	RLEEESAQLK	3	RLEEESAQLK3	21420.2	35643.4	23572.3
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	RLEEETEYLNSQLEDAIR	RLEEETEYLNSQLEDAIR	3	RLEEETEYLNSQLEDAIR3	21001.3	17359.1	14104.6
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	RLEEIPLIK	RLEEIPLIK	2	RLEEIPLIK2	25185.1	40389	25568
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	RLEELEAK	RLEELEAK	2	RLEELEAK2	46528.3	56099.1	47955.4
A0JPM9	A0JPM9	EIF3J_RAT	Eif3j	Eukaryotic translation initiation factor 3 subunit J	1	RLEEPEESK	RLEEPEESK	2	RLEEPEESK2	79486.9	116266	124743
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	RLEEQLMQYR	RLEEQLMQYR	3	RLEEQLMQYR3	7238.03	11180.4	15061.6
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	RLEEVAPSLQDR	RLEEVAPSLQDR	3	RLEEVAPSLQDR3	11673.1	5902.16	13392.7
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	RLEEVAPSLQDREDTQTGYLADEIIVGTR	RLEEVAPSLQDREDTQTGYLADEIIVGTR	4	RLEEVAPSLQDREDTQTGYLADEIIVGTR4	14991.3	21314.8	20970.9
Q5PQP8	Q5PQP8	Q5PQP8_RAT	Cuedc1	CUE domain containing 1	1	RLEFNQAMDDFK	RLEFNQAMDDFK	3	RLEFNQAMDDFK3	2885.73		
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	RLEFPSGETIVMHNPK	RLEFPSGETIVMHNPK	3	RLEFPSGETIVMHNPK3	34506.3	52318.1	45743
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	RLEFPSGETIVMHNPK	RLEFPSGETIVMHNPK	4	RLEFPSGETIVMHNPK4		120780	72170.5
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	RLEGEDDPDR	RLEGEDDPDR	2	RLEGEDDPDR2	751627		791888
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	RLEGEDDPDR	RLEGEDDPDR	3	RLEGEDDPDR3	74105.8		69631.1
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	RLEGELVAHEPAVQNVLDTAESLKDK	RLEGELVAHEPAVQNVLDTAESLKDK	4	RLEGELVAHEPAVQNVLDTAESLKDK4	11508.3	4846.92	4429.85
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	RLEGGQQVGMHSR	RLEGGQQVGMHSR	3	RLEGGQQVGMHSR3	70466.9	93140.4	71387.5
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	RLEGIENDPQPILLQSCTGLVTHR	RLEGIENDPQPILLQSC(UniMod:4)TGLVTHR	3	RLEGIENDPQPILLQSC(UniMod:4)TGLVTHR3	4044.89		4994.46
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	RLEGIENDPQPILLQSCTGLVTHR	RLEGIENDPQPILLQSC(UniMod:4)TGLVTHR	4	RLEGIENDPQPILLQSC(UniMod:4)TGLVTHR4	37589.3	28860.3	34957.9
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	RLEGQVEALSLEASQALQEK	RLEGQVEALSLEASQALQEK	3	RLEGQVEALSLEASQALQEK3	3637.48	1661.56	3359.13
Q5HZA4	Q5HZA4	LYSM1_RAT	Lysmd1	LysM and putative peptidoglycan-binding domain-containing protein 1	1	RLEHQLEPGDTLAGLALK	RLEHQLEPGDTLAGLALK	4	RLEHQLEPGDTLAGLALK4	5739.56	4503.75	1402.78
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	RLEHSEWESAR	RLEHSEWESAR	3	RLEHSEWESAR3	20144.1	23654	24599.7
Q6MG59	Q6MG59	G6B_RAT	Mpig6b	Megakaryocyte and platelet inhibitory receptor G6b	1	RLELLLSAGDSGTFFCK	RLELLLSAGDSGTFFC(UniMod:4)K	2	RLELLLSAGDSGTFFC(UniMod:4)K2	5209.87	4899.93	
Q6MG59	Q6MG59	G6B_RAT	Mpig6b	Megakaryocyte and platelet inhibitory receptor G6b	1	RLELLLSAGDSGTFFCK	RLELLLSAGDSGTFFC(UniMod:4)K	3	RLELLLSAGDSGTFFC(UniMod:4)K3	149432	146433	154027
F1M7Z1	F1M7Z1	F1M7Z1_RAT	Edc3	Enhancer of mRNA-decapping protein 3	1	RLEMTGVCASQMALTLLGGPNR	RLEMTGVC(UniMod:4)ASQMALTLLGGPNR	3	RLEMTGVC(UniMod:4)ASQMALTLLGGPNR3	4245.45		
P08025	P08025	IGF1_RAT	Igf1	Insulin-like growth factor I	1	RLEMYCAPLKPTK	RLEMYC(UniMod:4)APLKPTK	3	RLEMYC(UniMod:4)APLKPTK3	12299.8	18412.8	14210.1
P08025	P08025	IGF1_RAT	Igf1	Insulin-like growth factor I	1	RLEMYCAPLKPTK	RLEMYC(UniMod:4)APLKPTK	4	RLEMYC(UniMod:4)APLKPTK4	26615.1	28495.1	20010.9
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	RLENAGSLK	RLENAGSLK	2	RLENAGSLK2	100192	116838	114468
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	RLENNHAQLLR	RLENNHAQLLR	2	RLENNHAQLLR2	4554.39	2787.29	3077.84
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	RLENNHAQLLR	RLENNHAQLLR	3	RLENNHAQLLR3	2.76356e+06	3.00815e+06	2.87081e+06
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	RLENNHAQLLRR	RLENNHAQLLRR	4	RLENNHAQLLRR4	23546.7	23843.6	24852.3
Q9Z158	Q9Z158	STX17_RAT	Stx17	Syntaxin-17	1	RLEPAIQK	RLEPAIQK	2	RLEPAIQK2	7611.64	5078.96	6339.21
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	RLEPEQYEDACR	RLEPEQYEDAC(UniMod:4)R	2	RLEPEQYEDAC(UniMod:4)R2	2725.07		3273.89
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	RLEPEQYEDACR	RLEPEQYEDAC(UniMod:4)R	3	RLEPEQYEDAC(UniMod:4)R3	70358.1	73480	81221.8
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	RLEPLGIVVK	RLEPLGIVVK	2	RLEPLGIVVK2	6766.79	12702.7	7873.25
D3ZEJ9	D3ZEJ9	D3ZEJ9_RAT	RGD1310429	Similar to Protein Njmu-R1	1	RLEPPPSSHYCLYSFR	RLEPPPSSHYC(UniMod:4)LYSFR	4	RLEPPPSSHYC(UniMod:4)LYSFR4	15914.4	12543.2	12217.3
Q63369	Q63369	NFKB1_RAT	Nfkb1	Nuclear factor NF-kappa-B p105 subunit	1	RLEPVVSDAIYDSK	RLEPVVSDAIYDSK	3	RLEPVVSDAIYDSK3	8454.39	13494.7	7260.35
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	RLEQIQK	RLEQIQK	2	RLEQIQK2	8193.37	6393.16	
P29826	P29826	HB2B_RAT	RT1-Bb	Rano class II histocompatibility antigen, B-1 beta chain	1	RLEQPNVAISLSR	RLEQPNVAISLSR	3	RLEQPNVAISLSR3	8480.21	9292.37	7401.49
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	RLESDSYSPPHVR	RLESDSYSPPHVR	3	RLESDSYSPPHVR3	16710.6	14357.8	15310.5
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	RLESDSYSPPHVR	RLESDSYSPPHVR	4	RLESDSYSPPHVR4	6007.2	5527.01	8643.95
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	RLESEMDILK	RLESEMDILK	2	RLESEMDILK2	16303.1	19604.9	16878.1
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	RLESEMDILK	RLESEMDILK	3	RLESEMDILK3	3685.8	9250.92	7226.95
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	RLESIATTLVSYK	RLESIATTLVSYK	2	RLESIATTLVSYK2	6918.52	6263.8	2731.2
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	RLESIATTLVSYK	RLESIATTLVSYK	3	RLESIATTLVSYK3	27317.7	34384.3	25712.6
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	RLETVALPLQGLEDLAADR	RLETVALPLQGLEDLAADR	3	RLETVALPLQGLEDLAADR3	41826.5	39524.5	33721
Q505J8	Q505J8	SYFA_RAT	Farsa	Phenylalanine--tRNA ligase alpha subunit	1	RLEVADGGLDSAELATQLGVEHQAVVGAVK	RLEVADGGLDSAELATQLGVEHQAVVGAVK	4	RLEVADGGLDSAELATQLGVEHQAVVGAVK4	9561.44	7803.48	10214.5
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	RLEVDIDIK	RLEVDIDIK	2	RLEVDIDIK2	2.0399e+06	2.21591e+06	1.42562e+06
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	RLEVVGIEGVIEMGQIYTR	RLEVVGIEGVIEMGQIYTR	3	RLEVVGIEGVIEMGQIYTR3	12804.6	6572.69	11739.1
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	RLFAQLAGEDAEISAFELQTILR	RLFAQLAGEDAEISAFELQTILR	3	RLFAQLAGEDAEISAFELQTILR3	10991	11580.3	16853.7
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	RLFFTTASAHLK	RLFFTTASAHLK	3	RLFFTTASAHLK3	4803.4	3985.22	2299.98
Q9JMB5	Q9JMB5	ADRM1_RAT	Adrm1	Proteasomal ubiquitin receptor ADRM1	1	RLFFWMQEPK	RLFFWMQEPK	3	RLFFWMQEPK3	26980.2	31021.3	23321.7
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	RLFLGPYK	RLFLGPYK	2	RLFLGPYK2	9304.14	2204.14	6508.56
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	RLFLQFTTGTDR	RLFLQFTTGTDR	3	RLFLQFTTGTDR3	8710.02	5239.95	7763.68
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	RLFLVDDLVDSLK	RLFLVDDLVDSLK	3	RLFLVDDLVDSLK3	2258.19	1346.41	3488.93
P18422	P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	1	RLFNVDR	RLFNVDR	2	RLFNVDR2	129599	164759	161827
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	RLFQLQMCEYLIK	RLFQLQMC(UniMod:4)EYLIK	3	RLFQLQMC(UniMod:4)EYLIK3	7424.88	13613.6	13962.7
P54645	P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	1	RLFQQILSGVDYCHR	RLFQQILSGVDYC(UniMod:4)HR	3	RLFQQILSGVDYC(UniMod:4)HR3	9538.72	21040	17017.4
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	RLFTFQFNNLGNTDINYIK	RLFTFQFNNLGNTDINYIK	3	RLFTFQFNNLGNTDINYIK3	5456.4	5409.07	10305.4
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	RLFTFSLVNSCGTADINSLATDGK	RLFTFSLVNSC(UniMod:4)GTADINSLATDGK	3	RLFTFSLVNSC(UniMod:4)GTADINSLATDGK3	2600.37	7788.74	3804.13
P97711	P97711	GRK6_RAT	Grk6	G protein-coupled receptor kinase 6	1	RLGAGMLEPPFKPDPQAIYCK	RLGAGMLEPPFKPDPQAIYC(UniMod:4)K	4	RLGAGMLEPPFKPDPQAIYC(UniMod:4)K4	7902.02	9298.08	4910.53
A0A8I5Y7I2	A0A8I5Y7I2	A0A8I5Y7I2_RAT	Kctd12	Potassium channel tetramerization domain containing 12	1	RLGAPQQPGPGPPPPHSR	RLGAPQQPGPGPPPPHSR	3	RLGAPQQPGPGPPPPHSR3	32631.5	17062.4	26430.2
A0A8I5Y7I2	A0A8I5Y7I2	A0A8I5Y7I2_RAT	Kctd12	Potassium channel tetramerization domain containing 12	1	RLGAPQQPGPGPPPPHSR	RLGAPQQPGPGPPPPHSR	4	RLGAPQQPGPGPPPPHSR4	62773.4	52315.8	78113
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	RLGCFDHAQR	RLGC(UniMod:4)FDHAQR	2	RLGC(UniMod:4)FDHAQR2		6735.42	7038.8
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	RLGCFDHAQR	RLGC(UniMod:4)FDHAQR	3	RLGC(UniMod:4)FDHAQR3	184778	200077	191138
P05696	P68403;P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	0	RLGCGPEGER	RLGC(UniMod:4)GPEGER	2	RLGC(UniMod:4)GPEGER2	6538.51		2565.72
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	RLGDLQADSDESQR	RLGDLQADSDESQR	3	RLGDLQADSDESQR3	5572.06	11056.4	6583.59
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	RLGEDPLSR	RLGEDPLSR	2	RLGEDPLSR2	19217.7	25021.4	36981.9
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	RLGEDPLSRK	RLGEDPLSRK	3	RLGEDPLSRK3	19144.2	23743.3	19822.3
Q63433	Q63433	PKN1_RAT	Pkn1	Serine/threonine-protein kinase N1	1	RLGELPADHPK	RLGELPADHPK	3	RLGELPADHPK3	23404.7	24795.7	27875
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	RLGIDSILLDSGSSR	RLGIDSILLDSGSSR	3	RLGIDSILLDSGSSR3	5887.05	4176.72	1443.84
Q561Q9	Q561Q9	Q561Q9_RAT	Ctsw	Cathepsin W	1	RLGIFAHNLAQAQR	RLGIFAHNLAQAQR	3	RLGIFAHNLAQAQR3		10040.7	9352.59
Q561Q9	Q561Q9	Q561Q9_RAT	Ctsw	Cathepsin W	1	RLGIFAHNLAQAQR	RLGIFAHNLAQAQR	4	RLGIFAHNLAQAQR4	3231.87	6747	12797.8
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	RLGIFGDTEDVLGK	RLGIFGDTEDVLGK	2	RLGIFGDTEDVLGK2	18528.2	19814.7	14074.3
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	RLGIFGDTEDVLGK	RLGIFGDTEDVLGK	3	RLGIFGDTEDVLGK3	505748	540904	549660
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	RLGINLLGGPLGGK	RLGINLLGGPLGGK	3	RLGINLLGGPLGGK3	57778.3	46733.4	48272.8
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	RLGMYELLLK	RLGMYELLLK	2	RLGMYELLLK2	247945	235706	242687
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	RLGMYELLLK	RLGMYELLLK	3	RLGMYELLLK3	100678	120977	92283.7
D3ZDE4	D3ZDE4	D3ZDE4_RAT	Dguok	Deoxyguanosine kinase	1	RLGNLLDMMYQEPAR	RLGNLLDMMYQEPAR	3	RLGNLLDMMYQEPAR3	3380.92	3866.53	4515.79
Q68HB8	Q68HB8	Q68HB8_RAT	Pcdh7	Protocadherin 7	1	RLGPADSAPYPGGGGNSGSGGGSGGSK	RLGPADSAPYPGGGGNSGSGGGSGGSK	3	RLGPADSAPYPGGGGNSGSGGGSGGSK3		5672.99	9105.42
Q63692	Q63692	CDC37_RAT	Cdc37	Hsp90 co-chaperone Cdc37	1	RLGPGGLDPVEVYESLPEELQK	RLGPGGLDPVEVYESLPEELQK	3	RLGPGGLDPVEVYESLPEELQK3	121069	124723	134912
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	RLGQSLNCNANVYMR	RLGQSLNC(UniMod:4)NANVYMR	3	RLGQSLNC(UniMod:4)NANVYMR3	127429	107733	99579
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	RLGQSLNCNANVYMRPWENK	RLGQSLNC(UniMod:4)NANVYMRPWENK	3	RLGQSLNC(UniMod:4)NANVYMRPWENK3	200122	210084	167750
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	RLGQSLNCNANVYMRPWENK	RLGQSLNC(UniMod:4)NANVYMRPWENK	4	RLGQSLNC(UniMod:4)NANVYMRPWENK4	2.39581e+06	2.64007e+06	2.42505e+06
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	RLGSPATSVPGMGLHPPGPPLAR	RLGSPATSVPGMGLHPPGPPLAR	3	RLGSPATSVPGMGLHPPGPPLAR3	40879.6	50373.4	30638.4
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	RLGSPATSVPGMGLHPPGPPLAR	RLGSPATSVPGMGLHPPGPPLAR	4	RLGSPATSVPGMGLHPPGPPLAR4	261921	305371	270893
A0A8I6AJP4	A0A8I6AJP4	A0A8I6AJP4_RAT	Phactr4	Phosphatase and actin regulator 4	1	RLGSTGSQPSSEAEPGPEQASK	RLGSTGSQPSSEAEPGPEQASK	3	RLGSTGSQPSSEAEPGPEQASK3	3045.06	6068.35	6736.49
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	RLGSTSDIEEK	RLGSTSDIEEK	2	RLGSTSDIEEK2	12935		10467.2
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	RLGSTSDIEEK	RLGSTSDIEEK	3	RLGSTSDIEEK3	21356.9	17641.3	11830.8
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	RLGSTSDIEEKENR	RLGSTSDIEEKENR	3	RLGSTSDIEEKENR3	20962.1	29819.8	27897.6
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	RLGSTSDIEEKENR	RLGSTSDIEEKENR	4	RLGSTSDIEEKENR4	4524.58		7208.45
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	RLGTECFLAQMR	RLGTEC(UniMod:4)FLAQMR	3	RLGTEC(UniMod:4)FLAQMR3	7423.1	5383.12	2623.07
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	RLGTVPQFPR	RLGTVPQFPR	3	RLGTVPQFPR3	109539	142022	134453
P47858	P47858	PFKAM_RAT	Pfkm	ATP-dependent 6-phosphofructokinase, muscle type	1	RLGYDTR	RLGYDTR	2	RLGYDTR2	23772.8	29294.7	
F1LSG7	F1LSG7	F1LSG7_RAT	Fgfr2	Fibroblast growth factor receptor	1	RLHAVPAANTVK	RLHAVPAANTVK	3	RLHAVPAANTVK3	6587.79	3615	6550.84
Q9Z2P6	Q9Z2P6	SNP29_RAT	Snap29	Synaptosomal-associated protein 29	1	RLHDAELDSVPASTVNTEVYPK	RLHDAELDSVPASTVNTEVYPK	3	RLHDAELDSVPASTVNTEVYPK3	9599.88	6090.7	6127.45
Q9Z2P6	Q9Z2P6	SNP29_RAT	Snap29	Synaptosomal-associated protein 29	1	RLHDAELDSVPASTVNTEVYPK	RLHDAELDSVPASTVNTEVYPK	4	RLHDAELDSVPASTVNTEVYPK4	15499.2	18016.2	9490.17
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	RLHDEKEETSGNYDSR	RLHDEKEETSGNYDSR	3	RLHDEKEETSGNYDSR3			9075.95
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	RLHDEKEETSGNYDSR	RLHDEKEETSGNYDSR	4	RLHDEKEETSGNYDSR4			1576.27
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	RLHDLMYFNTLNNIDVIK	RLHDLMYFNTLNNIDVIK	4	RLHDLMYFNTLNNIDVIK4	9653.37	8091.98	6480.3
G3V681	G3V681;A0A8I6GIN4	G3V681_RAT	Mcm4	DNA replication licensing factor MCM4	0	RLHGLDEEAEQK	RLHGLDEEAEQK	3	RLHGLDEEAEQK3	6710.94	3446.56	
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	RLHLDLLQNVLR	RLHLDLLQNVLR	3	RLHLDLLQNVLR3	6620.69	12934.6	14233.2
A0A8I6AL39	A0A8I6AL39	A0A8I6AL39_RAT	Fgd3	FYVE, RhoGEF and PH domain containing 3	1	RLHLLDQVFCAK	RLHLLDQVFC(UniMod:4)AK	3	RLHLLDQVFC(UniMod:4)AK3	2666.54	5170.22	4721.25
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	RLHPAGATIHFSCAPGYVLK	RLHPAGATIHFSC(UniMod:4)APGYVLK	4	RLHPAGATIHFSC(UniMod:4)APGYVLK4	5605.36	3147.35	3925.83
A0A8I5ZK89	A0A8I5ZK89	A0A8I5ZK89_RAT	Dock5	Dedicator of cytokinesis 5	1	RLIALQIPLLAEGIR	RLIALQIPLLAEGIR	3	RLIALQIPLLAEGIR3	1340.28		
P60868	D3ZZK1;A0A8I6AG52;A0A0G2K6L6;M0R5V6;P60868;M0R987;M0R566;M0RB28	RS20_RAT	Rps20	Small ribosomal subunit protein uS10	0	RLIDLHSPSEIVK	RLIDLHSPSEIVK	3	RLIDLHSPSEIVK3	12166	8413.72	3940.93
Q62991	Q62991	SCFD1_RAT	Scfd1	Sec1 family domain-containing protein 1	1	RLIDLHTNVATAVLEHIK	RLIDLHTNVATAVLEHIK	4	RLIDLHTNVATAVLEHIK4	3620.33	2435.84	3958.79
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	RLIEDTEDWRPR	RLIEDTEDWRPR	3	RLIEDTEDWRPR3	19298.2	12669.5	15189.3
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	RLIFSTITSK	RLIFSTITSK	2	RLIFSTITSK2	8001.68	7056.55	8822.68
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	RLIFSTITSK	RLIFSTITSK	3	RLIFSTITSK3	4864.7	10343	4674.09
Q5M890	Q5M890	Q5M890_RAT	Apon	Apolipoprotein N	1	RLISNPEIENATIPIEDR	RLISNPEIENATIPIEDR	3	RLISNPEIENATIPIEDR3	205595	181234	218026
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	RLISVEPRPEQTEPDFQCSR	RLISVEPRPEQTEPDFQC(UniMod:4)SR	4	RLISVEPRPEQTEPDFQC(UniMod:4)SR4	4805.44	11434.4	
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	RLISVLNK	RLISVLNK	2	RLISVLNK2		5025.95	4427.31
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	RLIVDVIR	RLIVDVIR	2	RLIVDVIR2	8160.56	7698.41	10031.1
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	RLIWLYQNLIK	RLIWLYQNLIK	3	RLIWLYQNLIK3	3715.53	3862.33	5473.68
A0A8I5ZY02	A0A8I5ZY02;A0A8I5ZTK7	A0A8I5ZY02_RAT	ENSRNOG00000070192	Ig-like domain-containing protein	0	RLIYLVSK	RLIYLVSK	2	RLIYLVSK2	15800.7	14231	11097.7
A0A8I6GC23	A0A8I6GC23;A0A8I6AAM9	A0A8I6GC23_RAT	ENSRNOG00000071049	Ig-like domain-containing protein	0	RLIYQVSK	RLIYQVSK	2	RLIYQVSK2	85837	73019	62296
A0A0G2JY98	F1LYF1;A0A0G2JY98	A0A0G2JY98_RAT	ENSRNOG00000067883	Ig-like domain-containing protein	0	RLIYQVSNLGSGVPDR	RLIYQVSNLGSGVPDR	3	RLIYQVSNLGSGVPDR3	14272.9	11649.8	14286.4
A0A8I6GLU1	A0A8I6GLU1	A0A8I6GLU1_RAT	ENSRNOG00000070189	Ig-like domain-containing protein	1	RLIYSTSTLESGVPSR	RLIYSTSTLESGVPSR	3	RLIYSTSTLESGVPSR3	179557	207513	238552
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	RLLAGDHPIELLLR	RLLAGDHPIELLLR	3	RLLAGDHPIELLLR3	40255.2	61413.9	50919.5
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	RLLAGDHPIELLLR	RLLAGDHPIELLLR	4	RLLAGDHPIELLLR4	33236.6	56818.4	48704.4
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	RLLCNGDNDCGDQSDEANCR	RLLC(UniMod:4)NGDNDC(UniMod:4)GDQSDEANC(UniMod:4)R	3	RLLC(UniMod:4)NGDNDC(UniMod:4)GDQSDEANC(UniMod:4)R3	6148.57	3338.32	5645.96
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	RLLCNGDNDCGDQSDEANCRR	RLLC(UniMod:4)NGDNDC(UniMod:4)GDQSDEANC(UniMod:4)RR	4	RLLC(UniMod:4)NGDNDC(UniMod:4)GDQSDEANC(UniMod:4)RR4	1624.79		471.437
O35314	O35314	SCG1_RAT	Chgb	Secretogranin-1	1	RLLDEGHDPVHESPVDTAK	RLLDEGHDPVHESPVDTAK	4	RLLDEGHDPVHESPVDTAK4	7900.57	13104.5	14691.3
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	RLLDQQEK	RLLDQQEK	2	RLLDQQEK2	11864.1	31546.3	24486.9
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	RLLEAMETCNHSLK	RLLEAMETC(UniMod:4)NHSLK	3	RLLEAMETC(UniMod:4)NHSLK3	1213.36	5354.6	3419.97
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	RLLEEEEK	RLLEEEEK	2	RLLEEEEK2	5650.77	5419.55	4754.98
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	RLLEEFVNHIQELQIMDER	RLLEEFVNHIQELQIMDER	3	RLLEEFVNHIQELQIMDER3		2113.67	1533.98
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	RLLEEFVNHIQELQIMDER	RLLEEFVNHIQELQIMDER	4	RLLEEFVNHIQELQIMDER4	24162.2	23127.3	30192.2
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	RLLEELLK	RLLEELLK	2	RLLEELLK2	15563.1	16428.2	16668.1
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	RLLEFELAQLTK	RLLEFELAQLTK	3	RLLEFELAQLTK3	7122.15	10099.3	7569.65
Q9WTT7	Q9WTT7	5MP1_RAT	Bzw2	eIF5-mimic protein 1	1	RLLELFPVNR	RLLELFPVNR	3	RLLELFPVNR3	49301.5	38931.9	39927.7
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	RLLELGPKPEVAQQTR	RLLELGPKPEVAQQTR	3	RLLELGPKPEVAQQTR3	16511.5	12652.5	15466.6
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	RLLELGPKPEVAQQTR	RLLELGPKPEVAQQTR	4	RLLELGPKPEVAQQTR4	67665.8	95124.7	82000.6
Q64232	Q64232	TECR_RAT	Tecr	Very-long-chain enoyl-CoA reductase	1	RLLETLFVHR	RLLETLFVHR	3	RLLETLFVHR3	120202	124787	95748.4
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	RLLFCTGK	RLLFC(UniMod:4)TGK	2	RLLFC(UniMod:4)TGK2	1590.57	6377.37	6859.6
A0A8I5ZK60	A0A8I5ZK60	A0A8I5ZK60_RAT	Ccer2	Coiled-coil glutamate-rich protein 2	1	RLLGGDFNK	RLLGGDFNK	2	RLLGGDFNK2	5073.08	5996.44	5196.97
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	RLLHVAVSDVNDDVR	RLLHVAVSDVNDDVR	3	RLLHVAVSDVNDDVR3	9200.95	6864.5	4866.18
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	RLLHVAVSDVNDDVR	RLLHVAVSDVNDDVR	4	RLLHVAVSDVNDDVR4	3392.5	5663.11	4760.17
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	RLLHVAVSDVNDDVRR	RLLHVAVSDVNDDVRR	4	RLLHVAVSDVNDDVRR4	14212.2	14105.7	12871.9
D3ZE15	D3ZE15;A0A8I6A382;F1LZC5	D3ZE15_RAT	Ndufa13	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13	0	RLLIEDLEAR	RLLIEDLEAR	3	RLLIEDLEAR3	3901.38	9377.43	6179.65
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	RLLLQLEATK	RLLLQLEATK	2	RLLLQLEATK2	21949	36125.2	18136.3
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	RLLLQLEATK	RLLLQLEATK	3	RLLLQLEATK3	67201.6	74240.6	85447.5
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	RLLLVGAPR	RLLLVGAPR	2	RLLLVGAPR2	5759.5		
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	RLLNHSLLLHK	RLLNHSLLLHK	3	RLLNHSLLLHK3	3009.72	8561.72	8383.17
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	RLLPIMCAYK	RLLPIMC(UniMod:4)AYK	2	RLLPIMC(UniMod:4)AYK2	3109.16		1253.9
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	RLLPVFAQTFQHTMLPSIR	RLLPVFAQTFQHTMLPSIR	4	RLLPVFAQTFQHTMLPSIR4	3886.79	2599.79	
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	RLLQFYAETCPAPER	RLLQFYAETC(UniMod:4)PAPER	3	RLLQFYAETC(UniMod:4)PAPER3	84481.7	72167.6	60422.5
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	RLLQLQEQMR	RLLQLQEQMR	3	RLLQLQEQMR3	3911.75	4026.57	6664.81
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	RLLSDSLPPSTGTFQEAQSR	RLLSDSLPPSTGTFQEAQSR	3	RLLSDSLPPSTGTFQEAQSR3	327916	365028	391188
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	RLLSELSDASIQVENVR	RLLSELSDASIQVENVR	3	RLLSELSDASIQVENVR3	38775.1	37975.5	43566.8
A0A8I6ASK1	A0A8I6ASK1	A0A8I6ASK1_RAT	P4ha2	procollagen-proline 4-dioxygenase	1	RLLSLDPSHER	RLLSLDPSHER	3	RLLSLDPSHER3	11907	9240.05	12538.1
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	RLLSNEEEKNR	RLLSNEEEKNR	3	RLLSNEEEKNR3	1334.82		1639.87
P0C5W1	P0C5W1	MAP1S_RAT	Map1s	Microtubule-associated protein 1S	1	RLLSPALGVVFLNAR	RLLSPALGVVFLNAR	3	RLLSPALGVVFLNAR3	5329.76	3778.2	3664.88
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	RLLSSAFDEVYPALPSDVQTAIK	RLLSSAFDEVYPALPSDVQTAIK	3	RLLSSAFDEVYPALPSDVQTAIK3	16705.3	17779.6	11510.3
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	RLLTQLNETEAAFDEFWAK	RLLTQLNETEAAFDEFWAK	3	RLLTQLNETEAAFDEFWAK3	4237.21	1958.16	
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	RLLYNLEMEQMAK	RLLYNLEMEQMAK	3	RLLYNLEMEQMAK3	9192.33	6349.49	6663.7
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	RLLYNSMDPTLR	RLLYNSMDPTLR	3	RLLYNSMDPTLR3	13583.5	11902.9	11051
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	RLLYNVEMEQMAK	RLLYNVEMEQMAK	3	RLLYNVEMEQMAK3			3453.76
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	RLMADELER	RLMADELER	2	RLMADELER2	8003.58	2740.99	1317.07
B2RYD0	B2RYD0	B2RYD0_RAT	Ube2g2	Ubiquitin-conjugating enzyme E2G 2	1	RLMAEYK	RLMAEYK	2	RLMAEYK2	16675.7	19836.3	18210.5
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	RLMELACNTK	RLMELAC(UniMod:4)NTK	2	RLMELAC(UniMod:4)NTK2	2903.34	1622.97	5752.14
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	RLMELACNTK	RLMELAC(UniMod:4)NTK	3	RLMELAC(UniMod:4)NTK3	65385.2	75956.1	64135.7
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	RLMEQACNIK	RLMEQAC(UniMod:4)NIK	3	RLMEQAC(UniMod:4)NIK3	2575.89	4880.22	
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	RLMLCAENRK	RLMLC(UniMod:4)AENRK	3	RLMLC(UniMod:4)AENRK3	2798.63	4094.3	3872.72
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	RLMRDADDLQK	RLMRDADDLQK	3	RLMRDADDLQK3	64336.7	73241.1	189400
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	RLNAYTGVVSLQR	RLNAYTGVVSLQR	3	RLNAYTGVVSLQR3	219694	260384	234565
P11240	P11240;A0A8I6A0L0	COX5A_RAT	Cox5a	Cytochrome c oxidase subunit 5A, mitochondrial	0	RLNDFASAVR	RLNDFASAVR	2	RLNDFASAVR2	52141.6	60059.5	41382.8
P11240	P11240;A0A8I6A0L0	COX5A_RAT	Cox5a	Cytochrome c oxidase subunit 5A, mitochondrial	0	RLNDFASAVR	RLNDFASAVR	3	RLNDFASAVR3	274990	331557	311247
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	RLNEELER	RLNEELER	2	RLNEELER2	9315.55	10218.2	10508.8
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	RLNEIEAAMR	RLNEIEAAMR	3	RLNEIEAAMR3	6188.74	5978.4	5060
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	RLNHYVLYK	RLNHYVLYK	2	RLNHYVLYK2		7031.25	2466.54
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	RLNHYVLYK	RLNHYVLYK	3	RLNHYVLYK3	87023.9	148897	110396
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	RLNIIIVSEGAIDTQNKPITSEK	RLNIIIVSEGAIDTQNKPITSEK	3	RLNIIIVSEGAIDTQNKPITSEK3	8646.91	6641.25	2299.67
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	RLNIIIVSEGAIDTQNKPITSEK	RLNIIIVSEGAIDTQNKPITSEK	4	RLNIIIVSEGAIDTQNKPITSEK4	73758.6	73074.7	80703.3
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	RLNITEEQQAVLNR	RLNITEEQQAVLNR	3	RLNITEEQQAVLNR3	104464	108977	129689
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	RLNITEEQQAVLNRK	RLNITEEQQAVLNRK	3	RLNITEEQQAVLNRK3	2353.82	1882.42	431.138
A0A8I5ZYB9	A0A8I5ZYB9	A0A8I5ZYB9_RAT	Lrrc32	Leucine rich repeat containing 32	1	RLNLAENR	RLNLAENR	2	RLNLAENR2	23065.5	20160	16814
Q8K3F3	A0A8I6G618;Q8K3F3	PP14B_RAT	Ppp1r14b	Protein phosphatase 1 regulatory subunit 14B	0	RLNLEEWILEQLTR	RLNLEEWILEQLTR	3	RLNLEEWILEQLTR3	3080.9	3424.31	
Q6MG06	Q6MG06	GNL1_RAT	Gnl1	Guanine nucleotide-binding protein-like 1	1	RLNQQPSQGLGPR	RLNQQPSQGLGPR	3	RLNQQPSQGLGPR3	3847.32	8232.05	3761.44
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	RLNRPLTLSEK	RLNRPLTLSEK	3	RLNRPLTLSEK3	133120	136996	144471
P54001	P54001	P4HA1_RAT	P4ha1	Prolyl 4-hydroxylase subunit alpha-1	1	RLNTEWSELENLILK	RLNTEWSELENLILK	3	RLNTEWSELENLILK3	12228.8	9044.23	8269.44
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	RLNTVAHYQVPDGSLVALVSK	RLNTVAHYQVPDGSLVALVSK	3	RLNTVAHYQVPDGSLVALVSK3	1534.62	3709	5067.7
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	RLNTVAHYQVPDGSLVALVSK	RLNTVAHYQVPDGSLVALVSK	4	RLNTVAHYQVPDGSLVALVSK4	9334.76	15008.5	17259.4
Q5XIA1	Q5XIA1	NCLN_RAT	Ncln	BOS complex subunit NCLN	1	RLPAFTLSHLENHR	RLPAFTLSHLENHR	3	RLPAFTLSHLENHR3		3364.09	3919.91
Q5XIA1	Q5XIA1	NCLN_RAT	Ncln	BOS complex subunit NCLN	1	RLPAFTLSHLENHR	RLPAFTLSHLENHR	4	RLPAFTLSHLENHR4	63250.9	72418.6	85151.2
P29994	P29994;P29995;Q63269	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	0	RLPALLEK	RLPALLEK	2	RLPALLEK2	28318.1	28033.6	24792.5
F7FG68	F7FG68	F7FG68_RAT	Syvn1	Synoviolin 1	1	RLPCNHIFHTSCLR	RLPC(UniMod:4)NHIFHTSC(UniMod:4)LR	4	RLPC(UniMod:4)NHIFHTSC(UniMod:4)LR4	9561.82	12223.6	10342.2
M0R9Q1	M0R9Q1	M0R9Q1_RAT	Rbm14	RNA binding motif protein 14	1	RLPDAHSDYAR	RLPDAHSDYAR	3	RLPDAHSDYAR3	35774.2	3919.49	
F1M386	F1M386	RPGF2_RAT	Rapgef2	Rap guanine nucleotide exchange factor 2	1	RLPDQLSK	RLPDQLSK	2	RLPDQLSK2	1878.6	3986.03	1738.02
A0A8I6APP3	A0A8I6APP3	A0A8I6APP3_RAT	Plekho2	Pleckstrin homology domain containing O2	1	RLPDSALSEK	RLPDSALSEK	2	RLPDSALSEK2	16666.8	13640.1	10115
F1LTX4	F1LTX4	F1LTX4_RAT	Lrrn4	Leucine rich repeat neuronal 4	1	RLPELSVLTLHHNR	RLPELSVLTLHHNR	4	RLPELSVLTLHHNR4	52066.8	45240.6	34955.3
B2RYS2	F7FFF0;B2RYS2	B2RYS2_RAT	Uqcrb	Cytochrome b-c1 complex subunit 7	0	RLPENLYNDR	RLPENLYNDR	3	RLPENLYNDR3	52874.7	76038.1	130132
Q9WVR7	Q9WVR7	PPM1F_RAT	Ppm1f	Protein phosphatase 1F	1	RLPEQEEEEEEEEER	RLPEQEEEEEEEEER	3	RLPEQEEEEEEEEER3	2717.26	4831.34	2789.17
A0A8I5ZRU1	A0A8I5ZRU1	A0A8I5ZRU1_RAT	LOC100363472	Nuclear receptor-binding factor 2-like	1	RLPEVQGVFDRDPDTLLFLLQQK	RLPEVQGVFDRDPDTLLFLLQQK	4	RLPEVQGVFDRDPDTLLFLLQQK4	15207.5	7695.1	4955.24
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	RLPEVYCMVSR	RLPEVYC(UniMod:4)MVSR	3	RLPEVYC(UniMod:4)MVSR3	42754.4	29831.5	30430.9
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	RLPGDIQVVPIGVGSR	RLPGDIQVVPIGVGSR	2	RLPGDIQVVPIGVGSR2	132069	129032	98623.6
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	RLPGDIQVVPIGVGSR	RLPGDIQVVPIGVGSR	3	RLPGDIQVVPIGVGSR3	5.47948e+06	6.26425e+06	6.00572e+06
E9PU02	E9PU02	E9PU02_RAT	Trappc9	Trafficking protein particle complex subunit 9	1	RLPGNSLPSEAANR	RLPGNSLPSEAANR	3	RLPGNSLPSEAANR3	15598.4	17046.9	10466
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	RLPLNFLSGEK	RLPLNFLSGEK	2	RLPLNFLSGEK2	5651.87	7543.55	2910
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	RLPLNFLSGEK	RLPLNFLSGEK	3	RLPLNFLSGEK3	24487	21710.3	28394.8
M0RC73	M0RC73	M0RC73_RAT	Naa16	N(alpha)-acetyltransferase 16, NatA auxiliary subunit	1	RLPLNFVPGK	RLPLNFVPGK	3	RLPLNFVPGK3	3277.8		3982.62
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	RLPNNHIGISFIPR	RLPNNHIGISFIPR	3	RLPNNHIGISFIPR3	9947.42	3466.63	5215.77
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	RLPNNHIGISFIPR	RLPNNHIGISFIPR	4	RLPNNHIGISFIPR4	7418.27	4810.74	3807.07
Q63433	Q63433	PKN1_RAT	Pkn1	Serine/threonine-protein kinase N1	1	RLPPPFVPTLSGR	RLPPPFVPTLSGR	3	RLPPPFVPTLSGR3	9609.88	9742.83	17529.6
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	RLPPQQIEK	RLPPQQIEK	2	RLPPQQIEK2	11026.7	9529.93	5478.95
B0BN19	B0BN19	B0BN19_RAT	Rab22a	RAB22A, member RAS oncogene family	1	RLPSTDASPASGGK	RLPSTDASPASGGK	3	RLPSTDASPASGGK3	18461.5	14054.7	11548.1
D3ZVB7	D3ZVB7	D3ZVB7_RAT	Ogn	Osteoglycin	1	RLPTGSYF	RLPTGSYF	2	RLPTGSYF2	15158	16728.3	18849.5
A2RRU1	A2RRU1	GYS1_RAT	Gys1	Glycogen [starch] synthase, muscle	1	RLPVATIFTTHATLLGR	RLPVATIFTTHATLLGR	3	RLPVATIFTTHATLLGR3	7669.13	13430.2	15987.3
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	RLPVFGTEPR	RLPVFGTEPR	3	RLPVFGTEPR3	46158.3	44155.7	45049.8
Q4QQS6	Q4QQS6	Q4QQS6_RAT	Alg5	dolichyl-phosphate beta-glucosyltransferase	1	RLPVMMDEALNYLEK	RLPVMMDEALNYLEK	3	RLPVMMDEALNYLEK3	21558.6	14751.6	16570.2
Q6P752	Q6P752	TOIP2_RAT	Tor1aip2	Torsin-1A-interacting protein 2	1	RLPVTEAERHEEETQLVTEK	RLPVTEAERHEEETQLVTEK	4	RLPVTEAERHEEETQLVTEK4	5752.92	5719.03	7298.38
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	RLPVTNEMVHNLVAIELAYINTK	RLPVTNEMVHNLVAIELAYINTK	3	RLPVTNEMVHNLVAIELAYINTK3	3564.1	4921.55	1736.49
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	RLPVTNEMVHNLVAIELAYINTK	RLPVTNEMVHNLVAIELAYINTK	4	RLPVTNEMVHNLVAIELAYINTK4	16047	34782.9	15312.1
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	RLQAAGNAVK	RLQAAGNAVK	2	RLQAAGNAVK2	576602		524119
P47824	P47824	P2RX1_RAT	P2rx1	P2X purinoceptor 1	1	RLQDELSAFFFEYDTPR	RLQDELSAFFFEYDTPR	3	RLQDELSAFFFEYDTPR3	22752	73367.4	53283.5
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	RLQDGQAFISHSPGSPEDPGMDSIVR	RLQDGQAFISHSPGSPEDPGMDSIVR	4	RLQDGQAFISHSPGSPEDPGMDSIVR4	6838.65	11857.7	10989.2
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	RLQEALER	RLQEALER	2	RLQEALER2	54085.6	37569.4	44948.4
O08773	O08773	RGS14_RAT	Rgs14	Regulator of G-protein signaling 14	1	RLQEALQPILAK	RLQEALQPILAK	3	RLQEALQPILAK3	21560.7	39779.9	22199.7
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	RLQEANMR	RLQEANMR	2	RLQEANMR2	2988.18	4231.2	6379.74
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	RLQEDPNYSPQR	RLQEDPNYSPQR	2	RLQEDPNYSPQR2	6428.36	7997.01	14828.7
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	RLQEDPNYSPQR	RLQEDPNYSPQR	3	RLQEDPNYSPQR3	123916	161116	161001
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	RLQEDYWR	RLQEDYWR	2	RLQEDYWR2	35973.3	37569.7	40684.9
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	RLQEDYWR	RLQEDYWR	3	RLQEDYWR3	53854.7	94466.5	78565.8
P0CE43	P0CE43	GRB10_RAT	Grb10	Growth factor receptor-bound protein 10	1	RLQEEDQQLR	RLQEEDQQLR	3	RLQEEDQQLR3	3431.51	2397.45	8238.49
B1WBT4	B1WBT4	B1WBT4_RAT	Srpk2	SRSF protein kinase 2	1	RLQEIEELER	RLQEIEELER	3	RLQEIEELER3	25946.8	30239.8	21696.5
A0A8I5ZRG3	A0A8I5ZRG3	A0A8I5ZRG3_RAT	Frmd4b	FERM domain containing 4B	1	RLQEIENSINEYR	RLQEIENSINEYR	3	RLQEIENSINEYR3	22646.5	17544.7	18267.2
A0A8I5ZWM5	A0A8I6A513;A0A8I5ZWM5	A0A8I5ZWM5_RAT	ENSRNOG00000062828	Tr-type G domain-containing protein	0	RLQELAK	RLQELAK	2	RLQELAK2	46557.6	58420.8	73672.6
Q5HZE2	Q5HZE2	TACAN_RAT	Tmem120a	Ion channel TACAN	1	RLQELALVLK	RLQELALVLK	3	RLQELALVLK3	4640.47	6999.7	2959.28
P08082	P08082	CLCB_RAT	Cltb	Clathrin light chain B	1	RLQELDAASK	RLQELDAASK	2	RLQELDAASK2	28556.4	42995.2	27474.5
O88658	O88658	KIF1B_RAT	Kif1b	Kinesin-like protein KIF1B	1	RLQEMEILYK	RLQEMEILYK	2	RLQEMEILYK2	3383.86		
Q5RKH6	Q5RKH6	OS9_RAT	Os9	Protein OS-9	1	RLQESQSPELVQK	RLQESQSPELVQK	3	RLQESQSPELVQK3	14782.3	18752	13326.9
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	RLQGEMMK	RLQGEMMK	2	RLQGEMMK2	41662.1	42861.3	49227.1
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	RLQGQLEQGDDTAAEK	RLQGQLEQGDDTAAEK	3	RLQGQLEQGDDTAAEK3	84705.6	111940	93658
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	RLQGQLEQGDDTAAEKLEK	RLQGQLEQGDDTAAEKLEK	4	RLQGQLEQGDDTAAEKLEK4	1166.6	2079.22	2369.09
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	RLQIAQLYPISIFIKPK	RLQIAQLYPISIFIKPK	3	RLQIAQLYPISIFIKPK3	8027.4	4650.87	6507.33
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	RLQIAQLYPISIFIKPK	RLQIAQLYPISIFIKPK	4	RLQIAQLYPISIFIKPK4	4751.54	1984.94	1919.33
Q4KM98	Q4KM98	MFF_RAT	Mff	Mitochondrial fission factor	1	RLQLLEEENKER	RLQLLEEENKER	3	RLQLLEEENKER3	14830	15400.4	12442
Q4KM98	Q4KM98	MFF_RAT	Mff	Mitochondrial fission factor	1	RLQLLEEENKER	RLQLLEEENKER	4	RLQLLEEENKER4	23382.2	28303.7	29003.8
D3ZES7	D3ZWP6;D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	0	RLQMQMDNLESR	RLQMQMDNLESR	3	RLQMQMDNLESR3	18998.3	27259.5	22461.1
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	RLQPFLQR	RLQPFLQR	2	RLQPFLQR2	4088.8	4663.34	2125.16
D4A415	D4A415	D4A415_RAT	Abraxas2	Abraxas 2, BRISC complex subunit	1	RLQQALLSR	RLQQALLSR	2	RLQQALLSR2	375.729	3143.79	3497.45
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	RLQQELEDK	RLQQELEDK	2	RLQQELEDK2	2116.14	1259.68	
Q6AXN4	Q6AXN4	NDC1_RAT	Ndc1	Nucleoporin NDC1	1	RLQQFLEFKE	RLQQFLEFKE	2	RLQQFLEFKE2		3679.73	
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	RLQQGSESPMMIGELR	RLQQGSESPMMIGELR	3	RLQQGSESPMMIGELR3	22378.6	22146	20816.4
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	RLQQQSGAWGPSK	RLQQQSGAWGPSK	3	RLQQQSGAWGPSK3	21925.6	19999.6	14359.7
P63025	P63025	VAMP3_RAT	Vamp3	Vesicle-associated membrane protein 3	1	RLQQTQNQVDEVVDIMR	RLQQTQNQVDEVVDIMR	3	RLQQTQNQVDEVVDIMR3	13336.5	27693.8	12495.3
Q505J8	Q505J8	SYFA_RAT	Farsa	Phenylalanine--tRNA ligase alpha subunit	1	RLQQVQAGQAEK	RLQQVQAGQAEK	3	RLQQVQAGQAEK3	1846.44		6770.12
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	RLQQYSQNSQGAFGTR	RLQQYSQNSQGAFGTR	3	RLQQYSQNSQGAFGTR3	1931.56	3807.11	3114.37
P05065	Q6AY07;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	RLQSIGTENTEENR	RLQSIGTENTEENR	3	RLQSIGTENTEENR3	11500.2	9158.74	8472.41
P05065	Q6AY07;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	RLQSIGTENTEENRR	RLQSIGTENTEENRR	3	RLQSIGTENTEENRR3	27251.6	27516.1	32862.8
P05065	Q6AY07;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	RLQSIGTENTEENRR	RLQSIGTENTEENRR	4	RLQSIGTENTEENRR4	107024	212536	169852
F1M9D0	F1M9D0	F1M9D0_RAT	Map3k2	Mitogen activated protein kinase kinase kinase 2	1	RLQTICLSGTGMK	RLQTIC(UniMod:4)LSGTGMK	3	RLQTIC(UniMod:4)LSGTGMK3	4664.73	4320.91	6360.43
P29314	M0RB65;D3ZV50;P29314	RS9_RAT	Rps9	Small ribosomal subunit protein uS4	0	RLQTQVFK	RLQTQVFK	2	RLQTQVFK2	4840.85	6026.67	2460.01
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	RLQVGQELIDYFSDK	RLQVGQELIDYFSDK	3	RLQVGQELIDYFSDK3	5024.9	6544.4	5244.25
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	RLQVHHSETSPHDPPLFEEQK	RLQVHHSETSPHDPPLFEEQK	3	RLQVHHSETSPHDPPLFEEQK3	7666.49		11212.9
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	RLQVHHSETSPHDPPLFEEQK	RLQVHHSETSPHDPPLFEEQK	4	RLQVHHSETSPHDPPLFEEQK4	180711	175465	98315.8
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	RLQVLAEFQEK	RLQVLAEFQEK	2	RLQVLAEFQEK2	24689.1	6541.03	12357.1
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	RLQVLAEFQEK	RLQVLAEFQEK	3	RLQVLAEFQEK3	119883	109485	106978
D3ZMI0	D3ZMI0	D3ZMI0_RAT	Angptl8	Angiopoietin-like 8	1	RLQVQLR	RLQVQLR	2	RLQVQLR2	6304.22	6623.51	2951.22
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	RLQYDPTCER	RLQYDPTC(UniMod:4)ER	3	RLQYDPTC(UniMod:4)ER3	60083.5	71278.2	61671.7
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	RLQYLSSK	RLQYLSSK	2	RLQYLSSK2	5924.96	3986.28	6030.51
D3ZG43	D3ZG43	D3ZG43_RAT	Ndufs3	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial	1	RLSAFGEYVAEILPK	RLSAFGEYVAEILPK	3	RLSAFGEYVAEILPK3	23991	14404.7	25232.5
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	RLSALDPMMEQEMEEIR	RLSALDPMMEQEMEEIR	3	RLSALDPMMEQEMEEIR3	14399.9	22460.7	34218.8
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	RLSDTVDK	RLSDTVDK	2	RLSDTVDK2	29498.5	20845.3	14116.1
B2GV38	B2GV38	UBL4A_RAT	Ubl4a	Ubiquitin-like protein 4A	1	RLSDYNIGPNSK	RLSDYNIGPNSK	3	RLSDYNIGPNSK3	48195	64764.5	63069.4
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	RLSELLR	RLSELLR	2	RLSELLR2		14076.8	37454.2
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	RLSENSCSLDDLEIGAGHLSSSAFNSEK	RLSENSC(UniMod:4)SLDDLEIGAGHLSSSAFNSEK	4	RLSENSC(UniMod:4)SLDDLEIGAGHLSSSAFNSEK4	6570.28	1863.32	7769.4
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	RLSFIGTPYWMAPEVAAVALK	RLSFIGTPYWMAPEVAAVALK	3	RLSFIGTPYWMAPEVAAVALK3	7935.83	5219.11	6787.01
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	RLSFLVGYIANK	RLSFLVGYIANK	3	RLSFLVGYIANK3	4474.31		4841.14
A0A8I6A6B6	A0A8I6A6B6	A0A8I6A6B6_RAT	Ppp1r12b	Protein phosphatase 1 regulatory subunit	1	RLSGTSDIEEK	RLSGTSDIEEK	2	RLSGTSDIEEK2		5798.99	
A0A8I6A6B6	A0A8I6A6B6	A0A8I6A6B6_RAT	Ppp1r12b	Protein phosphatase 1 regulatory subunit	1	RLSGTSDIEEKENR	RLSGTSDIEEKENR	4	RLSGTSDIEEKENR4		6479.49	
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	RLSHELAETTR	RLSHELAETTR	3	RLSHELAETTR3	26228.6	9869.65	34451.7
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	RLSLELLK	RLSLELLK	2	RLSLELLK2	2015		
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	RLSPQDKPIFLPVEDTSFQWVDSLK	RLSPQDKPIFLPVEDTSFQWVDSLK	4	RLSPQDKPIFLPVEDTSFQWVDSLK4	4316.63		
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	RLSQLQPLPQTLQAWAR	RLSQLQPLPQTLQAWAR	3	RLSQLQPLPQTLQAWAR3	29964.9	42518	50785.8
A0A8I6AJP4	A0A8I6AJP4;P62024	A0A8I6AJP4_RAT	Phactr4	Phosphatase and actin regulator 4	0	RLSQRPTAEELEQR	RLSQRPTAEELEQR	4	RLSQRPTAEELEQR4	7725.98	6291.54	
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	RLSSLNQDTNLAEDNQK	RLSSLNQDTNLAEDNQK	3	RLSSLNQDTNLAEDNQK3	6744.89	9545.26	2755.29
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	RLSSVDSVLKR	RLSSVDSVLKR	3	RLSSVDSVLKR3	10858.1	8471.72	9636.72
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	RLSVEIWDWDR	RLSVEIWDWDR	2	RLSVEIWDWDR2	6443.57	3838.68	
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	RLSVEIWDWDR	RLSVEIWDWDR	3	RLSVEIWDWDR3	53281.1	45323.5	44928.1
D4AD29	D4AD29	D4AD29_RAT	Lamtor4	Ragulator complex protein LAMTOR4	1	RLSVVFGEHTLLVTVSGQR	RLSVVFGEHTLLVTVSGQR	4	RLSVVFGEHTLLVTVSGQR4			2597.67
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	RLTALHPPEK	RLTALHPPEK	3	RLTALHPPEK3	10337.1	13317.7	12240.2
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	RLTDADAMK	RLTDADAMK	2	RLTDADAMK2	416054	434665	471139
A0A0G2K528	A0A0G2K528	A0A0G2K528_RAT	Stx16	Syntaxin 16	1	RLTDAFLLLR	RLTDAFLLLR	3	RLTDAFLLLR3	3918.41	5274.3	5735.68
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	RLTELEATVR	RLTELEATVR	2	RLTELEATVR2	2365.81	2666.05	
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	RLTELEATVR	RLTELEATVR	3	RLTELEATVR3	21996.1	17973.1	18690.8
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	RLTEVADFHYAASK	RLTEVADFHYAASK	3	RLTEVADFHYAASK3	4212.92	2670.95	
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	RLTFSVTLK	RLTFSVTLK	2	RLTFSVTLK2	5600.85	11510.4	10956.5
P19357	P19357	GLUT4_RAT	Slc2a4	Solute carrier family 2, facilitated glucose transporter member 4	1	RLTGWADVSDALAELKDEK	RLTGWADVSDALAELKDEK	3	RLTGWADVSDALAELKDEK3		11242.6	9348.01
P19357	P19357	GLUT4_RAT	Slc2a4	Solute carrier family 2, facilitated glucose transporter member 4	1	RLTGWADVSDALAELKDEK	RLTGWADVSDALAELKDEK	4	RLTGWADVSDALAELKDEK4	3783.72	2607.31	8624.73
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	RLTLLGGPTPNTGAALDFVLR	RLTLLGGPTPNTGAALDFVLR	3	RLTLLGGPTPNTGAALDFVLR3		4142.81	915.354
D3ZCG1	D3ZCG1	D3ZCG1_RAT	Dipk2b	Divergent protein kinase domain 2B	1	RLTPDLVQGLPSPFLHCPSQR	RLTPDLVQGLPSPFLHC(UniMod:4)PSQR	4	RLTPDLVQGLPSPFLHC(UniMod:4)PSQR4	17200.5	9081.55	8904.14
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	RLTPQAVK	RLTPQAVK	2	RLTPQAVK2	13817.2	25432.8	17794.1
P17220	P17220;A0A8I6AGN7	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	0	RLTPTEVR	RLTPTEVR	2	RLTPTEVR2	255829	261531	238708
P17220	P17220	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	1	RLTPTEVRDYLAAIA	RLTPTEVRDYLAAIA	3	RLTPTEVRDYLAAIA3	10588.4	16184.2	18049.3
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	RLTQYDIVIK	RLTQYDIVIK	2	RLTQYDIVIK2	7.18969e+06	8.06678e+06	6.94434e+06
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	RLTQYDIVIK	RLTQYDIVIK	3	RLTQYDIVIK3	91603.6	114692	17320.6
Q7TP54	Q7TP54	RIPR2_RAT	Ripor2	Rho family-interacting cell polarization regulator 2	1	RLTSAEGPITTNK	RLTSAEGPITTNK	3	RLTSAEGPITTNK3	6220.49	8317.41	6481.14
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	RLTSDLGR	RLTSDLGR	2	RLTSDLGR2	20065.9	20845	26691.7
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	RLTSPVINTSLDTK	RLTSPVINTSLDTK	3	RLTSPVINTSLDTK3	13417.2	14788.6	17282.3
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	RLTVFHPSAYLNGHWLCCR	RLTVFHPSAYLNGHWLC(UniMod:4)C(UniMod:4)R	4	RLTVFHPSAYLNGHWLC(UniMod:4)C(UniMod:4)R4	13547.3	12355.5	12987.1
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	RLTVQTK	RLTVQTK	2	RLTVQTK2	236124	194906	319048
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	RLTVSSLQESGLK	RLTVSSLQESGLK	2	RLTVSSLQESGLK2	25413.4	26565.2	22675.3
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	RLTVSSLQESGLK	RLTVSSLQESGLK	3	RLTVSSLQESGLK3	70726.5	78526.1	82333.3
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	RLVECGSLFK	RLVEC(UniMod:4)GSLFK	2	RLVEC(UniMod:4)GSLFK2	1746.76		
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	RLVECGSLFK	RLVEC(UniMod:4)GSLFK	3	RLVEC(UniMod:4)GSLFK3	7750.87	3907.9	3101.89
P83953	Q56R16;P83953;A0A0G2JZS1	IMA5_RAT	Kpna1	Importin subunit alpha-5	0	RLVELLMHNDYK	RLVELLMHNDYK	3	RLVELLMHNDYK3	26739.6	29708.1	26017.3
O70351	O70351	HCD2_RAT	Hsd17b10	3-hydroxyacyl-CoA dehydrogenase type-2	1	RLVGQGATAVLLDVPNSEGETEAK	RLVGQGATAVLLDVPNSEGETEAK	3	RLVGQGATAVLLDVPNSEGETEAK3	81461.3	96450.2	91277.9
O70351	O70351	HCD2_RAT	Hsd17b10	3-hydroxyacyl-CoA dehydrogenase type-2	1	RLVGQGATAVLLDVPNSEGETEAKK	RLVGQGATAVLLDVPNSEGETEAKK	4	RLVGQGATAVLLDVPNSEGETEAKK4	9563.71	11427.7	13888.9
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	RLVHLQTLVLNGNPLLHAQLR	RLVHLQTLVLNGNPLLHAQLR	4	RLVHLQTLVLNGNPLLHAQLR4	21929.4	26209.8	11519
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	RLVHQNSASDDAEASMISK	RLVHQNSASDDAEASMISK	3	RLVHQNSASDDAEASMISK3	7864.55	8965.85	12668.2
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	RLVHQNSASDDAEASMISK	RLVHQNSASDDAEASMISK	4	RLVHQNSASDDAEASMISK4	24538.2	25961.9	33497.6
P09895	A0A8I6AAE6;P09895	RL5_RAT	Rpl5	Large ribosomal subunit protein uL18	0	RLVIQDK	RLVIQDK	2	RLVIQDK2	6212.24		2172.34
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	RLVLCMELANGKPQMR	RLVLC(UniMod:4)MELANGKPQMR	4	RLVLC(UniMod:4)MELANGKPQMR4	8294.2	14065.5	12160.8
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	RLVLCYEIQR	RLVLC(UniMod:4)YEIQR	3	RLVLC(UniMod:4)YEIQR3	15643.1	15435.1	19048.9
E9PTA5	E9PTA5	E9PTA5_RAT	Pign	GPI ethanolamine phosphate transferase 1	1	RLVLFVADGLR	RLVLFVADGLR	3	RLVLFVADGLR3	3896.91	5423.44	3382.28
P0C1S9	P0C1S9	DGLB_RAT	Daglb	Diacylglycerol lipase-beta	1	RLVNDGILSQAFSVAPEYR	RLVNDGILSQAFSVAPEYR	3	RLVNDGILSQAFSVAPEYR3	2816.28	3288.56	7263.75
D3ZFJ6	D3ZFJ6	D3ZFJ6_RAT	Lactb	Lactamase, beta	1	RLVNTPYVDNSYK	RLVNTPYVDNSYK	3	RLVNTPYVDNSYK3	3838.04	5319.43	3271.05
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	RLVPDSDVR	RLVPDSDVR	2	RLVPDSDVR2	36388.6	31527.1	18534.7
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	RLVPGGGATEIELAK	RLVPGGGATEIELAK	2	RLVPGGGATEIELAK2	1134.7		
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	RLVPGGGATEIELAK	RLVPGGGATEIELAK	3	RLVPGGGATEIELAK3	20468.5	24473.7	17991.6
Q6AYF8	Q6AYF8	Q6AYF8_RAT	Serpinb9	Serpin family B member 9	1	RLVQMMCCEDTYNLAHVK	RLVQMMC(UniMod:4)C(UniMod:4)EDTYNLAHVK	4	RLVQMMC(UniMod:4)C(UniMod:4)EDTYNLAHVK4	7572.24		3667.74
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	RLVSDGNINSDR	RLVSDGNINSDR	2	RLVSDGNINSDR2	3141.41	2342.6	1916.92
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	RLVSDGNINSDR	RLVSDGNINSDR	3	RLVSDGNINSDR3	51934.5	50590.9	60706.3
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	RLVSRPQDALEGVILSPSLEAR	RLVSRPQDALEGVILSPSLEAR	4	RLVSRPQDALEGVILSPSLEAR4	15201.7	11337	23794.5
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	RLVTGQR	RLVTGQR	2	RLVTGQR2			6580.37
Q05695	Q05695	L1CAM_RAT	L1cam	Neural cell adhesion molecule L1	1	RLVVFPTDDISLK	RLVVFPTDDISLK	3	RLVVFPTDDISLK3	34758.2	26038.5	35705.6
G3V6Q3	G3V6Q3	G3V6Q3_RAT	Wdr13	Uncharacterized protein	1	RLVVHEGSPVTSISAR	RLVVHEGSPVTSISAR	3	RLVVHEGSPVTSISAR3	2450.66	2790.8	3370.78
Q63228	Q63228	GMFB_RAT	Gmfb	Glia maturation factor beta	1	RLVVLDEELEGVSPDELKDELPER	RLVVLDEELEGVSPDELKDELPER	4	RLVVLDEELEGVSPDELKDELPER4	11607.4		
Q6P7D4	Q6P7D4	CP20A_RAT	Cyp20a1	Cytochrome P450 20A1	1	RLVVSLGTADALK	RLVVSLGTADALK	3	RLVVSLGTADALK3	4821.19		
Q6TEK3	Q6TEK3	VKORL_RAT	Vkorc1l1	Vitamin K epoxide reductase complex subunit 1-like protein 1	1	RLVYLNEAWK	RLVYLNEAWK	3	RLVYLNEAWK3	2084.26	2856.19	2198.6
P04897	P04897	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	1	RLWADHGVQACFGR	RLWADHGVQAC(UniMod:4)FGR	3	RLWADHGVQAC(UniMod:4)FGR3	82750.9	96504.2	105502
P04897	P04897	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	1	RLWADHGVQACFGR	RLWADHGVQAC(UniMod:4)FGR	4	RLWADHGVQAC(UniMod:4)FGR4	137992	207711	213476
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	RLWADPGAQACFGR	RLWADPGAQAC(UniMod:4)FGR	3	RLWADPGAQAC(UniMod:4)FGR3	85537.1	114153	119904
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	RLWEESLR	RLWEESLR	2	RLWEESLR2	6432.58	4680.07	7279.87
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	RLWEESLRQELLEEEEEEAEEVGLLLQAGK	RLWEESLRQELLEEEEEEAEEVGLLLQAGK	4	RLWEESLRQELLEEEEEEAEEVGLLLQAGK4	8466.35	6872.08	5894.09
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	RLWMEAMDGKEPIYHSPITK	RLWMEAMDGKEPIYHSPITK	4	RLWMEAMDGKEPIYHSPITK4	9462.18	5761.7	4359.31
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	RLWWLDLK	RLWWLDLK	2	RLWWLDLK2	1.21123e+06	1.23405e+06	1.22438e+06
A0A8I6ARV9	A0A8I6ARV9	A0A8I6ARV9_RAT	Ctsa	Carboxypeptidase	1	RLYESMNSQYLK	RLYESMNSQYLK	3	RLYESMNSQYLK3	8615.25	12108.2	10211.1
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	RLYFVCEFPF	RLYFVC(UniMod:4)EFPF	2	RLYFVC(UniMod:4)EFPF2	714768	748541	785433
A0A8I5ZYB9	A0A8I5ZYB9	A0A8I5ZYB9_RAT	Lrrc32	Leucine rich repeat containing 32	1	RLYLQGNPLSCCGNGWLAAQLHQGR	RLYLQGNPLSC(UniMod:4)C(UniMod:4)GNGWLAAQLHQGR	4	RLYLQGNPLSC(UniMod:4)C(UniMod:4)GNGWLAAQLHQGR4	4858.16	4389.67	5645.43
M0R5F1	M0R5F1	M0R5F1_RAT	Aspn	Asporin	1	RLYLSHNQLSEIPLNLPR	RLYLSHNQLSEIPLNLPR	3	RLYLSHNQLSEIPLNLPR3	8518.51	17983.5	15325.2
M0R5F1	M0R5F1	M0R5F1_RAT	Aspn	Asporin	1	RLYLSHNQLSEIPLNLPR	RLYLSHNQLSEIPLNLPR	4	RLYLSHNQLSEIPLNLPR4	31349.2	35969.9	38105.3
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	RLYYEGLQDK	RLYYEGLQDK	2	RLYYEGLQDK2	1785.81	1339.89	1692.37
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	RLYYEGLQDK	RLYYEGLQDK	3	RLYYEGLQDK3	9564.53	15528.6	12970.9
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	RMADAWIQAIK	RMADAWIQAIK	3	RMADAWIQAIK3	7952.15	2826.5	3977.91
P50398	P50398	GDIA_RAT	Gdi1	Rab GDP dissociation inhibitor alpha	1	RMAGSAFDFENMK	RMAGSAFDFENMK	3	RMAGSAFDFENMK3	2276.95	1848.98	5079.2
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	RMALLMAEMSR	RMALLMAEMSR	3	RMALLMAEMSR3	98826.9	142051	130290
Q9JI92	Q9JI92	SDCB1_RAT	Sdcbp	Syntenin-1	1	RMAPSIMK	RMAPSIMK	2	RMAPSIMK2	15305.6	19499.6	23169.7
P62755	A0A8I6A7W5;P62755	RS6_RAT	Rps6	Small ribosomal subunit protein eS6	0	RMATEVAADALGEEWK	RMATEVAADALGEEWK	3	RMATEVAADALGEEWK3	4454.34	3260.4	11289.2
Q4AEF8	Q4AEF8;D4ABY2	COPG1_RAT	Copg1	Coatomer subunit gamma-1	0	RMCYLTIK	RMC(UniMod:4)YLTIK	2	RMC(UniMod:4)YLTIK2	6486.42	9985.05	3275.68
Q8CG45	Q8CG45	ARK72_RAT	Akr7a2	Aflatoxin B1 aldehyde reductase member 2	1	RMDASASAATVR	RMDASASAATVR	3	RMDASASAATVR3	7102.23	5689.07	4762.41
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	RMDEEEEDNEGGEWER	RMDEEEEDNEGGEWER	3	RMDEEEEDNEGGEWER3	47417	53440.9	51643.9
Q07205	Q07205;A0A8I6ADE0;A0A8I5ZMQ1	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	RMDEISDHAK	RMDEISDHAK	2	RMDEISDHAK2	5531.79	8111.95	6639.04
Q07205	Q07205;A0A8I6ADE0;A0A8I5ZMQ1	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	RMDEISDHAK	RMDEISDHAK	3	RMDEISDHAK3	183957	206579	205381
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	RMDGQTDFWR	RMDGQTDFWR	3	RMDGQTDFWR3	3449.72	2875.24	9644.86
P18614	P18614	ITA1_RAT	Itga1	Integrin alpha-1	1	RMDIGPK	RMDIGPK	2	RMDIGPK2		3799.46	2582.73
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	RMDLVLELK	RMDLVLELK	2	RMDLVLELK2	10275.6	11674.5	11317.5
A0A0G2JWD0	A0A0G2JWD0	A0A0G2JWD0_RAT	Prom1	Prominin 1	1	RMDSEDVYDDVETVPMK	RMDSEDVYDDVETVPMK	3	RMDSEDVYDDVETVPMK3	3018.8	6528.8	4843.04
M0R4P9	M0R4P9	M0R4P9_RAT	Ube2h	Ubiquitin-conjugating enzyme E2H	1	RMDTDVVK	RMDTDVVK	2	RMDTDVVK2	41645.8	44834.3	42044.6
P38918	P38918	ARK73_RAT	Akr7a3	Aflatoxin B1 aldehyde reductase member 3	1	RMDVTSSSASVR	RMDVTSSSASVR	3	RMDVTSSSASVR3	5004.62	2511.09	
P14882	P14882	PCCA_RAT	Pcca	Propionyl-CoA carboxylase alpha chain, mitochondrial	1	RMEDALDSYVIR	RMEDALDSYVIR	3	RMEDALDSYVIR3	2090.65	4304.44	3693.96
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	RMEEKPLSSMQK	RMEEKPLSSMQK	3	RMEEKPLSSMQK3	57591.1	60792.8	69221.2
D3ZUB7	D3ZUB7	D3ZUB7_RAT	Anapc4	Anaphase-promoting complex subunit 4	1	RMENIIDQCLQKPADVIGR	RMENIIDQC(UniMod:4)LQKPADVIGR	4	RMENIIDQC(UniMod:4)LQKPADVIGR4	7207.51	4601.58	7304.14
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	RMEQHWGFGLEELYGLALR	RMEQHWGFGLEELYGLALR	4	RMEQHWGFGLEELYGLALR4	19804.2	17728.7	17953.9
Q9QZM5	A0A8I5ZLD3;Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	0	RMESSINHISQTVDIHK	RMESSINHISQTVDIHK	3	RMESSINHISQTVDIHK3	4518.03	4487.79	6098.75
Q9QZM5	A0A8I5ZLD3;Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	0	RMESSINHISQTVDIHK	RMESSINHISQTVDIHK	4	RMESSINHISQTVDIHK4	28131.6	51060.1	41361.4
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	RMFVNNEHDLQVCK	RMFVNNEHDLQVC(UniMod:4)K	3	RMFVNNEHDLQVC(UniMod:4)K3		2943.41	3869.86
P05765	P05765;D3ZSE0	RS21_RAT	Rps21	Small ribosomal subunit protein eS21	0	RMGESDDSILR	RMGESDDSILR	3	RMGESDDSILR3	10209.3	15443.6	8696.66
P13086	P13086	SUCA_RAT	Suclg1	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial	1	RMGHAGAIIAGGK	RMGHAGAIIAGGK	3	RMGHAGAIIAGGK3	14641.3	11784.3	17439.2
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	RMGLPDNYWQLSDVNR	RMGLPDNYWQLSDVNR	3	RMGLPDNYWQLSDVNR3	14617.5	25929.9	13380.2
P10536	P10536	RAB1B_RAT	Rab1b	Ras-related protein Rab-1B	1	RMGPGAASGGERPNLK	RMGPGAASGGERPNLK	3	RMGPGAASGGERPNLK3	18894.9	28321.8	16172.5
P10536	P10536	RAB1B_RAT	Rab1b	Ras-related protein Rab-1B	1	RMGPGAASGGERPNLK	RMGPGAASGGERPNLK	4	RMGPGAASGGERPNLK4	50067.9	84865.3	79820.6
Q6NYB7	Q6NYB7;A0A8I6AT03	RAB1A_RAT	Rab1A	Ras-related protein Rab-1A	0	RMGPGATAGGAEK	RMGPGATAGGAEK	2	RMGPGATAGGAEK2			3708.78
Q6NYB7	Q6NYB7;A0A8I6AT03	RAB1A_RAT	Rab1A	Ras-related protein Rab-1A	0	RMGPGATAGGAEK	RMGPGATAGGAEK	3	RMGPGATAGGAEK3			21126
Q5M7A4	Q5M7A4	UBA5_RAT	Uba5	Ubiquitin-like modifier-activating enzyme 5	1	RMGVVSDYEK	RMGVVSDYEK	3	RMGVVSDYEK3	9717.99	13901.6	21441.3
Q6AXT5	Q6AXT5	RAB21_RAT	Rab21	Ras-related protein Rab-21	1	RMIETAQVDER	RMIETAQVDER	3	RMIETAQVDER3	31437.6	37293.5	45274.8
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	RMLQEEEEAK	RMLQEEEEAK	2	RMLQEEEEAK2	19408.9	20950.4	22735
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	RMLQEEEEAK	RMLQEEEEAK	3	RMLQEEEEAK3	46584.8	62052.3	48711.3
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	RMLVQCMQDQEHPSIR	RMLVQC(UniMod:4)MQDQEHPSIR	4	RMLVQC(UniMod:4)MQDQEHPSIR4	4814.69	5158.63	7938.1
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	RMLYPGSVYLLQK	RMLYPGSVYLLQK	3	RMLYPGSVYLLQK3	7333.62	1626.82	7819.57
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	RMMLDHCLELQLFHR	RMMLDHC(UniMod:4)LELQLFHR	4	RMMLDHC(UniMod:4)LELQLFHR4		6084.38	2119.62
P70645	P70645	BLMH_RAT	Blmh	Bleomycin hydrolase	1	RMNDILNHK	RMNDILNHK	3	RMNDILNHK3	40716.8	41419	32570.9
Q8CIN9	Q8CIN9	RFFL_RAT	Rffl	E3 ubiquitin-protein ligase rififylin	1	RMNECPICR	RMNEC(UniMod:4)PIC(UniMod:4)R	3	RMNEC(UniMod:4)PIC(UniMod:4)R3	21948.1	21489.4	15666.5
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	RMNLMTPEALGK	RMNLMTPEALGK	3	RMNLMTPEALGK3	4650.2	6544.34	
Q6MG48	D3ZZ51;Q6MG48;A0A8I6G6W8	PRC2A_RAT	Prrc2a	Protein PRRC2A	0	RMPPPANLPSLK	RMPPPANLPSLK	3	RMPPPANLPSLK3	11665	8666.12	6326.73
Q8R491	Q8R491	EHD3_RAT	Ehd3	EH domain-containing protein 3	1	RMQDQLQAQDFSK	RMQDQLQAQDFSK	2	RMQDQLQAQDFSK2	4430.93		
Q8R491	Q8R491	EHD3_RAT	Ehd3	EH domain-containing protein 3	1	RMQDQLQAQDFSK	RMQDQLQAQDFSK	3	RMQDQLQAQDFSK3	40394.5	36525.7	36316.3
Q9JJM9	Q9JJM9	SEPT5_RAT	Septin5	Septin-5	1	RMQEMLQK	RMQEMLQK	2	RMQEMLQK2	6099.59		3814.98
A0A8I6ASK1	A0A8I6ASK1	A0A8I6ASK1_RAT	P4ha2	procollagen-proline 4-dioxygenase	1	RMQHITGLTVK	RMQHITGLTVK	3	RMQHITGLTVK3	4693.46	4632.91	7537.68
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	RMQLVLPK	RMQLVLPK	2	RMQLVLPK2	59493.4	60745.3	56026.7
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	RMQNNSAENETAEGEEK	RMQNNSAENETAEGEEK	2	RMQNNSAENETAEGEEK2			1785.48
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	RMQNNSAENETAEGEEK	RMQNNSAENETAEGEEK	3	RMQNNSAENETAEGEEK3	4223.2		23433.8
Q5RJS8	Q5RJS8	TPST2_RAT	Tpst2	Protein-tyrosine sulfotransferase 2	1	RMQPEQEELVMLGADHVEYR	RMQPEQEELVMLGADHVEYR	3	RMQPEQEELVMLGADHVEYR3	3476.62	5149.64	6044.13
Q5RJS8	Q5RJS8	TPST2_RAT	Tpst2	Protein-tyrosine sulfotransferase 2	1	RMQPEQEELVMLGADHVEYR	RMQPEQEELVMLGADHVEYR	4	RMQPEQEELVMLGADHVEYR4	6863.27	6247.58	8592.96
Q6MG59	Q6MG59	G6B_RAT	Mpig6b	Megakaryocyte and platelet inhibitory receptor G6b	1	RMSALVPGDASTVYAVVV	RMSALVPGDASTVYAVVV	2	RMSALVPGDASTVYAVVV2	19202.5	24345.4	32608.3
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	RMSELCIDFNK	RMSELC(UniMod:4)IDFNK	3	RMSELC(UniMod:4)IDFNK3	4124.87	3777.43	8194.23
Q6Q0N1	Q6Q0N1	CNDP2_RAT	Cndp2	Cytosolic non-specific dipeptidase	1	RMTEAAAADVQR	RMTEAAAADVQR	3	RMTEAAAADVQR3	2593.9	1760.65	
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	RMTIQDSLQHPWIKPK	RMTIQDSLQHPWIKPK	4	RMTIQDSLQHPWIKPK4	9202.37	6929.36	12704
Q5XI07	Q5XI07	LPP_RAT	Lpp	Lipoma-preferred partner homolog	1	RMVIPQQPPLTATK	RMVIPQQPPLTATK	3	RMVIPQQPPLTATK3	17177	12350.6	17093.4
D3ZR49	D3ZR49	D3ZR49_RAT	Man1a2	alpha-1,2-Mannosidase	1	RMYDDAVEAIEK	RMYDDAVEAIEK	3	RMYDDAVEAIEK3	737.627	9677.06	2225.36
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	RMYIVISDPDMIK	RMYIVISDPDMIK	2	RMYIVISDPDMIK2	6810.32	4024.54	
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	RMYIVISDPDMIK	RMYIVISDPDMIK	3	RMYIVISDPDMIK3	34982.7	24949.4	22520.9
E9PSP1	E9PSP1	E9PSP1_RAT	Pltp	Phospholipid transfer protein	1	RMYNFFSTFITSGMR	RMYNFFSTFITSGMR	3	RMYNFFSTFITSGMR3	9779.9	12325.7	8480.69
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	RNAEQFK	RNAEQFK	2	RNAEQFK2			122866
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	RNAEQFKDQADK	RNAEQFKDQADK	2	RNAEQFKDQADK2	9430.94		3880.18
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	RNAEQFKDQADK	RNAEQFKDQADK	3	RNAEQFKDQADK3			21196.3
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	RNAFMMLIHADQDR	RNAFMMLIHADQDR	3	RNAFMMLIHADQDR3	6347.74	14667.8	4364.99
P08494	P08494	MGP_RAT	Mgp	Matrix Gla protein	1	RNANTFISPQQR	RNANTFISPQQR	3	RNANTFISPQQR3	77081.5	92756.6	69079.8
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	RNATSPQVQRPSFMDYFDK	RNATSPQVQRPSFMDYFDK	4	RNATSPQVQRPSFMDYFDK4	12683	13770.9	20113.3
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	RNAVLAIYTIYR	RNAVLAIYTIYR	3	RNAVLAIYTIYR3	34951.2	43572.8	28092.7
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	RNCFASVFEK	RNC(UniMod:4)FASVFEK	2	RNC(UniMod:4)FASVFEK2	10609.5	4626.24	3637.04
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	RNCFASVFEK	RNC(UniMod:4)FASVFEK	3	RNC(UniMod:4)FASVFEK3	19598.5	30852.8	23278.3
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	RNDAVGGHPAQMQQKPSK	RNDAVGGHPAQMQQKPSK	4	RNDAVGGHPAQMQQKPSK4	4263.84		13593.2
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	RNDAWLPSQATR	RNDAWLPSQATR	3	RNDAWLPSQATR3	12699.1	14132.5	
Q3T1J1	Q3T1J1	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	1	RNDFQLIGIQDGYLSLLQDSGEVR	RNDFQLIGIQDGYLSLLQDSGEVR	3	RNDFQLIGIQDGYLSLLQDSGEVR3	544050	710488	576020
Q3T1J1	Q3T1J1	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	1	RNDFQLIGIQDGYLSLLQDSGEVREDLR	RNDFQLIGIQDGYLSLLQDSGEVREDLR	4	RNDFQLIGIQDGYLSLLQDSGEVREDLR4	25613	40630.6	29901.4
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	RNDKESLTLDEADWK	RNDKESLTLDEADWK	2	RNDKESLTLDEADWK2	4218.61	2579.11	
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	RNDKESLTLDEADWK	RNDKESLTLDEADWK	3	RNDKESLTLDEADWK3	371307	398604	425604
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	RNDKESLTLDEADWK	RNDKESLTLDEADWK	4	RNDKESLTLDEADWK4	194405	270114	251969
Q9JIX3	Q9JIX3	FHIT_RAT	Fhit	Bis(5'-adenosyl)-triphosphatase	1	RNDNIYDELQK	RNDNIYDELQK	3	RNDNIYDELQK3	10923.8	9541.6	17841.3
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	RNDSIIVDIFHGLFK	RNDSIIVDIFHGLFK	3	RNDSIIVDIFHGLFK3	23528	31816.7	22778
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	RNDSIIVDIFHGLFK	RNDSIIVDIFHGLFK	4	RNDSIIVDIFHGLFK4	15565.6	19309.4	15203.7
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	RNDTGVFVSDIVK	RNDTGVFVSDIVK	3	RNDTGVFVSDIVK3	11640.4	10036.9	9016.38
Q62740	Q62740	SPP24_RAT	Spp2	Secreted phosphoprotein 24	1	RNDYLLGFLYDEPK	RNDYLLGFLYDEPK	2	RNDYLLGFLYDEPK2	51021.4	58273.6	44685.4
Q62740	Q62740	SPP24_RAT	Spp2	Secreted phosphoprotein 24	1	RNDYLLGFLYDEPK	RNDYLLGFLYDEPK	3	RNDYLLGFLYDEPK3	480488	429633	480967
A0A0G2JVY4	A0A0G2JVY4	A0A0G2JVY4_RAT	Tmem63a	Transmembrane protein 63a	1	RNEAEAHAPPPFTPYVPR	RNEAEAHAPPPFTPYVPR	3	RNEAEAHAPPPFTPYVPR3	12347.3	14035.7	17319.5
A0A0G2JVY4	A0A0G2JVY4	A0A0G2JVY4_RAT	Tmem63a	Transmembrane protein 63a	1	RNEAEAHAPPPFTPYVPR	RNEAEAHAPPPFTPYVPR	4	RNEAEAHAPPPFTPYVPR4	10154.1	8641.08	10318.8
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	RNEALVSR	RNEALVSR	2	RNEALVSR2	8413.72	8816.29	9153.27
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	RNEDEEGYVPTSYVEVYLDK	RNEDEEGYVPTSYVEVYLDK	3	RNEDEEGYVPTSYVEVYLDK3	6709.36	7353.76	10017
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	RNEDVDPMAASAEYELEK	RNEDVDPMAASAEYELEK	3	RNEDVDPMAASAEYELEK3	8522.02	2212.08	2162.98
B3GNI6	A0A8I6AA08;B3GNI6	SEP11_RAT	Septin11	Septin-11	0	RNEFLGELQK	RNEFLGELQK	2	RNEFLGELQK2	21322.9	13440.3	14192
B3GNI6	A0A8I6AA08;B3GNI6	SEP11_RAT	Septin11	Septin-11	0	RNEFLGELQK	RNEFLGELQK	3	RNEFLGELQK3	308124	210004	279328
D3ZDR5	D3ZDR5	D3ZDR5_RAT	Prmt9	Protein arginine methyltransferase 9	1	RNEIYNAAIQK	RNEIYNAAIQK	3	RNEIYNAAIQK3	1558.94	3852.08	
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	RNELVIR	RNELVIR	2	RNELVIR2	10106.2	7976.69	8910.13
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	RNETSVIDHIGEDLLLWFSGPGEEK	RNETSVIDHIGEDLLLWFSGPGEEK	4	RNETSVIDHIGEDLLLWFSGPGEEK4	18973.9	23205	21434.9
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	RNFGYTLQSVNDLYIQK	RNFGYTLQSVNDLYIQK	3	RNFGYTLQSVNDLYIQK3	1.41736e+06	1.54591e+06	1.48653e+06
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	RNFLELTELK	RNFLELTELK	2	RNFLELTELK2	5892.08	4658.52	7091.07
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	RNFLELTELK	RNFLELTELK	3	RNFLELTELK3	10212.7	11441.4	7933.07
P13838	P13838	LEUK_RAT	Spn	Leukosialin (Fragment)	1	RNGTVDAWAGPAR	RNGTVDAWAGPAR	3	RNGTVDAWAGPAR3	29529.3	18988.6	32245.6
O55197	O55197	C3AR_RAT	C3ar1	C3a anaphylatoxin chemotactic receptor	1	RNHMSTDV	RNHMSTDV	2	RNHMSTDV2	6766.6	7935.42	7760.14
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	RNIATYEEQLVALFGTNMDIVEPTA	RNIATYEEQLVALFGTNMDIVEPTA	3	RNIATYEEQLVALFGTNMDIVEPTA3	4811.19	3523.73	4155.62
Q7TP21	Q7TP21	Q7TP21_RAT	Rpa1	Replication protein A subunit	1	RNICLMDMSGK	RNIC(UniMod:4)LMDMSGK	2	RNIC(UniMod:4)LMDMSGK2		1672.42	
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	RNIIGYFEQK	RNIIGYFEQK	2	RNIIGYFEQK2	9126.49	7212.37	5234.77
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	RNIIGYFEQK	RNIIGYFEQK	3	RNIIGYFEQK3	147094	156041	168962
D4A7U6	D4A7U6	D4A7U6_RAT	Lsm3	U6 snRNA-associated Sm-like protein LSm3	1	RNIPMLFVR	RNIPMLFVR	3	RNIPMLFVR3	15596	18233	20382.7
P09456	P09456	KAP0_RAT	Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit	1	RNIQQYNSFVSLSV	RNIQQYNSFVSLSV	2	RNIQQYNSFVSLSV2	4700.69	4146.83	5558.32
P12368	P12368	KAP2_RAT	Prkar2a	cAMP-dependent protein kinase type II-alpha regulatory subunit	1	RNISHYEEQLVK	RNISHYEEQLVK	3	RNISHYEEQLVK3	415.655	3885.81	5735.08
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	RNLADCLR	RNLADC(UniMod:4)LR	2	RNLADC(UniMod:4)LR2	177062	160895	164388
Q5XIF6	P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9;Q6AY56	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	RNLDIER	RNLDIER	2	RNLDIER2	4787.37		
Q5XIF6	P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9;Q6AY56	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	RNLDIERPTYTNLNR	RNLDIERPTYTNLNR	3	RNLDIERPTYTNLNR3	170475	148801	188417
Q5XIF6	P68370;Q5XIF6;Q68FR8;Q6AYZ1;Q6P9V9;Q6AY56	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	RNLDIERPTYTNLNR	RNLDIERPTYTNLNR	4	RNLDIERPTYTNLNR4	1.15066e+06	1.13695e+06	1.14856e+06
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	RNLELPR	RNLELPR	2	RNLELPR2	4168.29	2682.4	5920.43
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	RNLENDVNSLK	RNLENDVNSLK	2	RNLENDVNSLK2	4551.48	3520.37	5064.69
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	RNLENDVNSLK	RNLENDVNSLK	3	RNLENDVNSLK3	4238.37	6641.25	9000.2
Q4KM74	Q4KM74	SC22B_RAT	Sec22b	Vesicle-trafficking protein SEC22b	1	RNLGSINTELQDVQR	RNLGSINTELQDVQR	3	RNLGSINTELQDVQR3	27251.6	27947.8	23300.6
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	RNLPFTPILASVNR	RNLPFTPILASVNR	3	RNLPFTPILASVNR3	38922.1	51579.9	38011.5
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	RNLSADQWR	RNLSADQWR	2	RNLSADQWR2	10699.4	8165.61	7006.12
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	RNLSADQWR	RNLSADQWR	3	RNLSADQWR3	59844	63551.8	71256
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	RNLSFFQMR	RNLSFFQMR	3	RNLSFFQMR3	4739.6	5182.82	10437.1
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	RNLTEWFSR	RNLTEWFSR	3	RNLTEWFSR3	14355.1	14210.3	9284.97
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	RNLVVSVDDGATFEIVLHR	RNLVVSVDDGATFEIVLHR	4	RNLVVSVDDGATFEIVLHR4	2975.1	1655.05	5854
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	RNMGMIVINEGSLDGTR	RNMGMIVINEGSLDGTR	3	RNMGMIVINEGSLDGTR3	4910.88	7701.24	5631.13
Q64244	Q64244	CD38_RAT	Cd38	ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1	1	RNMIFACQDNYRPVR	RNMIFAC(UniMod:4)QDNYRPVR	4	RNMIFAC(UniMod:4)QDNYRPVR4	32451.1	36399.7	32363.8
Q499P8	Q499P8	RUSF1_RAT	Rusf1	RUS family member 1	1	RNNMADVSAK	RNNMADVSAK	2	RNNMADVSAK2	4460.63	1978.85	918.54
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	RNNQDCVEIYIK	RNNQDC(UniMod:4)VEIYIK	2	RNNQDC(UniMod:4)VEIYIK2	21250.5	16440.7	11861.8
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	RNNQDCVEIYIK	RNNQDC(UniMod:4)VEIYIK	3	RNNQDC(UniMod:4)VEIYIK3	114207	115622	118326
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	RNNSLQTATENTQAR	RNNSLQTATENTQAR	3	RNNSLQTATENTQAR3	5133.75	3334.95	6694.32
Q1HAQ0	Q1HAQ0	PCAT1_RAT	Lpcat1	Lysophosphatidylcholine acyltransferase 1	1	RNPALYASNVR	RNPALYASNVR	3	RNPALYASNVR3	126803	133292	113875
Q9Z254	Q9Z254	GIPC1_RAT	Gipc1	PDZ domain-containing protein GIPC1	1	RNPDELAEALDER	RNPDELAEALDER	2	RNPDELAEALDER2	1810.27		3525.56
Q9Z254	Q9Z254	GIPC1_RAT	Gipc1	PDZ domain-containing protein GIPC1	1	RNPDELAEALDER	RNPDELAEALDER	3	RNPDELAEALDER3	54624.7	53554.8	57973.7
P61314	P61314;A0A8I5ZY58;A0A8I6A471	RL15_RAT	Rpl15	Large ribosomal subunit protein eL15	0	RNPDTQWITKPVHK	RNPDTQWITKPVHK	3	RNPDTQWITKPVHK3	2592.94	2625.04	
P61314	P61314;A0A8I5ZY58;A0A8I6A471	RL15_RAT	Rpl15	Large ribosomal subunit protein eL15	0	RNPDTQWITKPVHK	RNPDTQWITKPVHK	4	RNPDTQWITKPVHK4	10535.5	10086.4	9941.74
P36953	P36953	AFAM_RAT	Afm	Afamin	1	RNPFAFAPVLLNVAAR	RNPFAFAPVLLNVAAR	3	RNPFAFAPVLLNVAAR3	93110.8	97676.8	74376.9
P69478	P69478	CHSTB_RAT	Chst11	Carbohydrate sulfotransferase 11	1	RNPFGVDICCR	RNPFGVDIC(UniMod:4)C(UniMod:4)R	3	RNPFGVDIC(UniMod:4)C(UniMod:4)R3	3811.22	7588.57	3885.04
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	RNPFPLLEDEEDLFADQK	RNPFPLLEDEEDLFADQK	3	RNPFPLLEDEEDLFADQK3	62730.6	49972	67724.1
Q5XI86	Q5XI86	Q5XI86_RAT	Ptrh2	aminoacyl-tRNA hydrolase	1	RNPQVLK	RNPQVLK	2	RNPQVLK2	12701.2	5688.59	8760.37
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	RNPYVLSDKDR	RNPYVLSDKDR	3	RNPYVLSDKDR3	11998.9	6357.51	4455.17
G3V8V4	G3V8V4	G3V8V4_RAT	Cers2	Ceramide synthase 2	1	RNQDRPSLLK	RNQDRPSLLK	3	RNQDRPSLLK3		14513.3	
G3V728	G3V728	G3V728_RAT	Nipsnap1	Nipsnap homolog 1	1	RNQLLLEFSFWNEPQPR	RNQLLLEFSFWNEPQPR	3	RNQLLLEFSFWNEPQPR3	2687.73	4162.92	2250.56
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	RNQLSTLPDELGDLPLVR	RNQLSTLPDELGDLPLVR	3	RNQLSTLPDELGDLPLVR3	9704.15	10680.8	8375.44
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	RNQNLLQHTQDLLR	RNQNLLQHTQDLLR	3	RNQNLLQHTQDLLR3	9354.14	6074.83	9776.82
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	RNQNLLQHTQDLLR	RNQNLLQHTQDLLR	4	RNQNLLQHTQDLLR4	3993.6	5573.4	5660.16
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	RNQNYMNILR	RNQNYMNILR	3	RNQNYMNILR3	23650.9	21894.3	20022.5
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	RNQPMTPEAVR	RNQPMTPEAVR	3	RNQPMTPEAVR3	54372.4	55445.3	63887.1
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	RNQSSQISTEK	RNQSSQISTEK	2	RNQSSQISTEK2			12785.1
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	RNQSSQISTEK	RNQSSQISTEK	3	RNQSSQISTEK3			15192.2
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	RNRPPLEEEEEEE	RNRPPLEEEEEEE	2	RNRPPLEEEEEEE2	16761.5	15076.8	14238.2
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	RNRPPLEEEEEEE	RNRPPLEEEEEEE	3	RNRPPLEEEEEEE3	1.69041e+06	1.78625e+06	2.18691e+06
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	RNSLIELPDDYSCLLNQASHFR	RNSLIELPDDYSC(UniMod:4)LLNQASHFR	4	RNSLIELPDDYSC(UniMod:4)LLNQASHFR4	31284.2	25203.5	20898.8
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	RNSLPQIPTLNLESR	RNSLPQIPTLNLESR	3	RNSLPQIPTLNLESR3	29131.7	20767.2	26873.6
A0A0G2K1A4	A0A0G2K1A4	A0A0G2K1A4_RAT	Evi5l	Ecotropic viral integration site 5-like	1	RNSSLPDENNVAR	RNSSLPDENNVAR	3	RNSSLPDENNVAR3	3062.1	8313.12	5516.93
P06685	P06687;P06685;P06686	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	0	RNSVFQQGMK	RNSVFQQGMK	2	RNSVFQQGMK2		3919.54	
P06685	P06687;P06685;P06686	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	0	RNSVFQQGMK	RNSVFQQGMK	3	RNSVFQQGMK3	18739.6	25593.7	18326
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	RNSWKDPALCCTLSPGDK	RNSWKDPALC(UniMod:4)C(UniMod:4)TLSPGDK	3	RNSWKDPALC(UniMod:4)C(UniMod:4)TLSPGDK3	6476.3	2546.88	2324.4
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	RNSWKDPALCCTLSPGDK	RNSWKDPALC(UniMod:4)C(UniMod:4)TLSPGDK	4	RNSWKDPALC(UniMod:4)C(UniMod:4)TLSPGDK4	52576.5	72538.1	53057.8
B0LT89	Q6V9V9;B0LT89	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	0	RNTFVGTPFWMAPEVIK	RNTFVGTPFWMAPEVIK	3	RNTFVGTPFWMAPEVIK3	42051.6	38030.8	61417.6
A0A8I6GBQ0	A0A8I6GBQ0	A0A8I6GBQ0_RAT	Stk26	Protein kinase domain-containing protein	1	RNTFVGTPFWMAPEVIQQSAYDSK	RNTFVGTPFWMAPEVIQQSAYDSK	3	RNTFVGTPFWMAPEVIQQSAYDSK3	12995.1	16009.4	19238.6
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	RNTITYSQMVK	RNTITYSQMVK	2	RNTITYSQMVK2	4539.52		
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	RNTITYSQMVK	RNTITYSQMVK	3	RNTITYSQMVK3	6448.92	7361.16	5875.26
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	RNTLEWCLPVIDAK	RNTLEWC(UniMod:4)LPVIDAK	2	RNTLEWC(UniMod:4)LPVIDAK2		2239.01	2380.73
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	RNTLEWCLPVIDAK	RNTLEWC(UniMod:4)LPVIDAK	3	RNTLEWC(UniMod:4)LPVIDAK3	33374.9	37708.9	37043.1
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	RNTLFGTFHVAHSSSLDDVDHK	RNTLFGTFHVAHSSSLDDVDHK	4	RNTLFGTFHVAHSSSLDDVDHK4	4491	7873.07	8668.71
Q9EQH1	Q9EQH1	GAB2_RAT	Gab2	GRB2-associated-binding protein 2	1	RNTLPAMDNSR	RNTLPAMDNSR	3	RNTLPAMDNSR3	5137.88		6357.22
P14659	P14659;A0A8I6AQL9;P63018;M0RCB1	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	0	RNTTIPTK	RNTTIPTK	2	RNTTIPTK2	385870		462534
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	RNTTPTGATPPAGMASTR	RNTTPTGATPPAGMASTR	3	RNTTPTGATPPAGMASTR3	9851.79	15445.4	12263.8
P62944	P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	RNVEGQDMLYQSLK	RNVEGQDMLYQSLK	3	RNVEGQDMLYQSLK3	14793.7	17683.9	14719.3
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	RNVGVVNSLFK	RNVGVVNSLFK	3	RNVGVVNSLFK3	10078.7	15428.7	12298.2
P20650	P20650	PPM1A_RAT	Ppm1a	Protein phosphatase 1A	1	RNVIEAVYNR	RNVIEAVYNR	3	RNVIEAVYNR3	11717.6	14326.6	21738.7
P35815	P35815	PPM1B_RAT	Ppm1b	Protein phosphatase 1B	1	RNVIEAVYSR	RNVIEAVYSR	3	RNVIEAVYSR3	26484.3	37256.2	28582.8
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	RNVLSDSK	RNVLSDSK	2	RNVLSDSK2	26305.8	18205.4	20411.2
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	RNVLSDSKPAGYSR	RNVLSDSKPAGYSR	3	RNVLSDSKPAGYSR3	282850	284087	308915
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	RNVLSDSKPAGYSR	RNVLSDSKPAGYSR	4	RNVLSDSKPAGYSR4	117672	189843	181114
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	RNVMILTNPVAAK	RNVMILTNPVAAK	2	RNVMILTNPVAAK2	2598.25	2318.15	
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	RNVMILTNPVAAK	RNVMILTNPVAAK	3	RNVMILTNPVAAK3	35195.7	38365.9	40404.8
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	RNVNFQK	RNVNFQK	2	RNVNFQK2	69725.3	68811.2	69855.5
A0A8I5ZWC6	A0A8I5ZWC6	A0A8I5ZWC6_RAT	Kpna3	Importin subunit alpha	1	RNVPQEESLEDSDVDADFK	RNVPQEESLEDSDVDADFK	3	RNVPQEESLEDSDVDADFK3	7140.27	6218.2	12174.7
A0A8I5ZXB9	A0A8I5ZXB9	A0A8I5ZXB9_RAT	Kifap3	Kinesin-associated protein 3	1	RNVQLICEGNGLK	RNVQLIC(UniMod:4)EGNGLK	3	RNVQLIC(UniMod:4)EGNGLK3	9733.42	10466.8	11041.1
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	RNVTVQPDDPISFMQLTAK	RNVTVQPDDPISFMQLTAK	3	RNVTVQPDDPISFMQLTAK3	126279	157686	140780
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	RNVYDLTSIPVR	RNVYDLTSIPVR	3	RNVYDLTSIPVR3	10892.8	18118.2	8216.74
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	RPAAAAPADRDDR	RPAAAAPADRDDR	3	RPAAAAPADRDDR3			11532.8
A0A8I5ZVX1	A0A8I5ZVX1	A0A8I5ZVX1_RAT	Ppfibp2	PPFIA binding protein 2	1	RPADESNLSPSEVVQWSNHR	RPADESNLSPSEVVQWSNHR	4	RPADESNLSPSEVVQWSNHR4	14042.3	9701.06	19307.4
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	RPADVPTVEPR	RPADVPTVEPR	2	RPADVPTVEPR2	24130.9	17878.8	10415.8
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	RPADVPTVEPR	RPADVPTVEPR	3	RPADVPTVEPR3	348580	318936	346930
P61980	A0A8I5ZZG4;P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	RPAEDMEEEQAFK	RPAEDMEEEQAFK	2	RPAEDMEEEQAFK2	936.948	1254.92	1691.13
P61980	A0A8I5ZZG4;P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	RPAEDMEEEQAFK	RPAEDMEEEQAFK	3	RPAEDMEEEQAFK3	183916	182212	195837
P61980	A0A8I5ZZG4;P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	RPAEDMEEEQAFKR	RPAEDMEEEQAFKR	3	RPAEDMEEEQAFKR3	37357.3	38043.1	11453.1
P61980	A0A8I5ZZG4;P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	RPAEDMEEEQAFKR	RPAEDMEEEQAFKR	4	RPAEDMEEEQAFKR4	23691.7	33693.9	32644.8
P0C2C0	P0C2C0	RM22_RAT	Mrpl22	Large ribosomal subunit protein uL22m	1	RPAEIYHCR	RPAEIYHC(UniMod:4)R	3	RPAEIYHC(UniMod:4)R3	24399.5		6763.18
P35284	P35284	RAB12_RAT	Rab12	Ras-related protein Rab-12	1	RPAGGGLGAVSPALSGGQAR	RPAGGGLGAVSPALSGGQAR	3	RPAGGGLGAVSPALSGGQAR3	32837.2	38394.1	35500.9
M0RCA3	M0RCA3	M0RCA3_RAT	Zfpl1	Zinc finger protein-like 1	1	RPALGWLAQLLR	RPALGWLAQLLR	3	RPALGWLAQLLR3	8606.88	7834.45	2046.09
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	RPAMLDNEADGSK	RPAMLDNEADGSK	3	RPAMLDNEADGSK3	37083.5	46172.8	24804.2
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	RPAPEELTVVLGQDR	RPAPEELTVVLGQDR	3	RPAPEELTVVLGQDR3	537334	509980	494872
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	RPAPFGSSWVK	RPAPFGSSWVK	3	RPAPFGSSWVK3	84176.1	76410.1	77317.3
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	RPATFHLHIYPQLPSAGSQTSCR	RPATFHLHIYPQLPSAGSQTSC(UniMod:4)R	4	RPATFHLHIYPQLPSAGSQTSC(UniMod:4)R4	9655.58	9636.9	10293.9
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	RPAVLHSLK	RPAVLHSLK	2	RPAVLHSLK2	1493.09	2526.37	
G3V9M1	G3V9M1	G3V9M1_RAT	Ddx23	RNA helicase	1	RPAVVYIGSAGKPHER	RPAVVYIGSAGKPHER	4	RPAVVYIGSAGKPHER4	18566.9	14867.9	12895
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	RPAYGDVTVTSLHPGGSAR	RPAYGDVTVTSLHPGGSAR	3	RPAYGDVTVTSLHPGGSAR3	61973.6	64453.3	55935.2
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	RPAYGDVTVTSLHPGGSAR	RPAYGDVTVTSLHPGGSAR	4	RPAYGDVTVTSLHPGGSAR4	118555	137451	146884
P36953	P36953	AFAM_RAT	Afm	Afamin	1	RPCFEHLK	RPC(UniMod:4)FEHLK	2	RPC(UniMod:4)FEHLK2	2466.73	1009.7	1738.38
P02770	P02770	ALBU_RAT	Alb	Albumin	1	RPCFSALTVDETYVPK	RPC(UniMod:4)FSALTVDETYVPK	2	RPC(UniMod:4)FSALTVDETYVPK2	279386	258915	209714
P02770	P02770	ALBU_RAT	Alb	Albumin	1	RPCFSALTVDETYVPK	RPC(UniMod:4)FSALTVDETYVPK	3	RPC(UniMod:4)FSALTVDETYVPK3	1.66241e+06	1.94661e+06	1.89856e+06
P02770	P02770	ALBU_RAT	Alb	Albumin	1	RPCFSALTVDETYVPKEFK	RPC(UniMod:4)FSALTVDETYVPKEFK	4	RPC(UniMod:4)FSALTVDETYVPKEFK4	12944.5	8600.14	4101.15
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	RPCGHPGDTPFGSFR	RPC(UniMod:4)GHPGDTPFGSFR	3	RPC(UniMod:4)GHPGDTPFGSFR3	115032	113384	93958
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	RPCGHPGDTPFGSFR	RPC(UniMod:4)GHPGDTPFGSFR	4	RPC(UniMod:4)GHPGDTPFGSFR4	111013	93775.2	80092.8
B0BNN4	B0BNN4	B0BNN4_RAT	Cfp	Complement factor properdin	1	RPCLHVPSCR	RPC(UniMod:4)LHVPSC(UniMod:4)R	3	RPC(UniMod:4)LHVPSC(UniMod:4)R3	34389.1	39756	14901.8
B0BNN4	B0BNN4	B0BNN4_RAT	Cfp	Complement factor properdin	1	RPCLHVPSCRDPEEK	RPC(UniMod:4)LHVPSC(UniMod:4)RDPEEK	4	RPC(UniMod:4)LHVPSC(UniMod:4)RDPEEK4	36850.2	33774.4	54008.5
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	RPCLTVMHGK	RPC(UniMod:4)LTVMHGK	3	RPC(UniMod:4)LTVMHGK3	10551.7	9590.41	6603.15
P54001	P54001	P4HA1_RAT	P4ha1	Prolyl 4-hydroxylase subunit alpha-1	1	RPCTLSELE	RPC(UniMod:4)TLSELE	2	RPC(UniMod:4)TLSELE2	45029.5	12629.5	27728.6
P35565	P35565	CALX_RAT	Canx	Calnexin	1	RPDADLK	RPDADLK	1	RPDADLK1	1856.39		5534.41
P35565	P35565	CALX_RAT	Canx	Calnexin	1	RPDADLK	RPDADLK	2	RPDADLK2	570519		450322
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	RPDEEVLVLR	RPDEEVLVLR	2	RPDEEVLVLR2		2646	
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	RPDEEVLVLR	RPDEEVLVLR	3	RPDEEVLVLR3	85064.7	96380.6	89381.2
Q4FZU4	Q4FZU4	ATL4_RAT	Adamtsl4	ADAMTS-like protein 4	1	RPDGCGVCGGDGSTCR	RPDGC(UniMod:4)GVC(UniMod:4)GGDGSTC(UniMod:4)R	3	RPDGC(UniMod:4)GVC(UniMod:4)GGDGSTC(UniMod:4)R3			2225.53
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	RPDGEGCIDENECQTK	RPDGEGC(UniMod:4)IDENEC(UniMod:4)QTK	3	RPDGEGC(UniMod:4)IDENEC(UniMod:4)QTK3	16713.6	33054.9	35037.1
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	RPDGEGCIDENECQTKPGICENGR	RPDGEGC(UniMod:4)IDENEC(UniMod:4)QTKPGIC(UniMod:4)ENGR	3	RPDGEGC(UniMod:4)IDENEC(UniMod:4)QTKPGIC(UniMod:4)ENGR3	822.297		
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	RPDGEGCIDENECQTKPGICENGR	RPDGEGC(UniMod:4)IDENEC(UniMod:4)QTKPGIC(UniMod:4)ENGR	4	RPDGEGC(UniMod:4)IDENEC(UniMod:4)QTKPGIC(UniMod:4)ENGR4	4482.79	4145.6	9109.04
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	RPDGEGCVDENECR	RPDGEGC(UniMod:4)VDENEC(UniMod:4)R	3	RPDGEGC(UniMod:4)VDENEC(UniMod:4)R3	3241.49	5086.29	
A0A8I6A3F2	A0A8I6A3F2;E9PSU8;A0A8I6GEK5	A0A8I6A3F2_RAT	AABR07034730.2	Ig-like domain-containing protein	0	RPDGVPDR	RPDGVPDR	2	RPDGVPDR2	6800.82		7107.8
Q5U318	Q5U318	PEA15_RAT	Pea15	Astrocytic phosphoprotein PEA-15	1	RPDLLTMVVDYR	RPDLLTMVVDYR	3	RPDLLTMVVDYR3	9191.62	8136.58	13853.5
Q6AY41	Q6AY41	CC50A_RAT	Tmem30a	Cell cycle control protein 50A	1	RPDNTAFK	RPDNTAFK	2	RPDNTAFK2	40682.1	39937.7	56382.9
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	RPDPIDWSLK	RPDPIDWSLK	2	RPDPIDWSLK2	120358	117773	115899
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	RPDPIDWSLK	RPDPIDWSLK	3	RPDPIDWSLK3	219594	234883	282759
Q6AXS5	Q6AXS5	SERB1_RAT	Serbp1	SERPINE1 mRNA-binding protein 1	1	RPDQQLQGDGK	RPDQQLQGDGK	3	RPDQQLQGDGK3			23503.3
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	RPDSIAPLTDR	RPDSIAPLTDR	3	RPDSIAPLTDR3	13852.5	29948.6	15361.6
P32038	P32038	CFAD_RAT	Cfd	Complement factor D	1	RPDVLQQLTVSIMDR	RPDVLQQLTVSIMDR	2	RPDVLQQLTVSIMDR2	4605.04	3458	
P32038	P32038	CFAD_RAT	Cfd	Complement factor D	1	RPDVLQQLTVSIMDR	RPDVLQQLTVSIMDR	3	RPDVLQQLTVSIMDR3	56414.2	62709.6	77962.7
Q5U2R0	Q5U2R0	MAT2B_RAT	Mat2b	Methionine adenosyltransferase 2 subunit beta	1	RPDVVESQPDAASQLNVGASGNLAK	RPDVVESQPDAASQLNVGASGNLAK	3	RPDVVESQPDAASQLNVGASGNLAK3	11634.1	13031.8	5061.37
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	RPDYDPEK	RPDYDPEK	2	RPDYDPEK2	15218.3	17442	
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	RPEEGTVDAQSSELSENPR	RPEEGTVDAQSSELSENPR	3	RPEEGTVDAQSSELSENPR3	70616.9	59261.7	73371
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	RPEEIIQILSQSQGAITFK	RPEEIIQILSQSQGAITFK	3	RPEEIIQILSQSQGAITFK3		7074.01	
P51111	P51111	HD_RAT	Htt	Huntingtin	1	RPEESVQETLAAAVPK	RPEESVQETLAAAVPK	3	RPEESVQETLAAAVPK3	29155.5	22497.4	35192.2
F1M471	F1M471	F1M471_RAT	Epm2aip1	EPM2A interacting protein 1	1	RPEFQSLLTESESEHGER	RPEFQSLLTESESEHGER	3	RPEFQSLLTESESEHGER3	1668.08	1339.79	1252.15
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	RPEGDYEVLDR	RPEGDYEVLDR	3	RPEGDYEVLDR3		4416.68	6268.57
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	RPEGDYEVLDRK	RPEGDYEVLDRK	3	RPEGDYEVLDRK3	21080.1	25358.1	19359.9
Q5EB62	Q5EB62	S2546_RAT	Slc25a46	Mitochondrial outer membrane protein SLC25A46	1	RPEGFDGLGYR	RPEGFDGLGYR	3	RPEGFDGLGYR3	19585.8	19279.7	31279.8
Q63616	Q63616	VP33B_RAT	Vps33b	Vacuolar protein sorting-associated protein 33B	1	RPEIGHIFLLDR	RPEIGHIFLLDR	3	RPEIGHIFLLDR3	3512.07		4688.42
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	RPEIPTEQSR	RPEIPTEQSR	3	RPEIPTEQSR3	41402.4	40823.1	44540.7
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	RPEIPTEQSREENLIPYSPDVQVHAER	RPEIPTEQSREENLIPYSPDVQVHAER	4	RPEIPTEQSREENLIPYSPDVQVHAER4	21022.5	25547.9	17566.9
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	RPEIVVQPLK	RPEIVVQPLK	3	RPEIVVQPLK3	59532.5	44152.2	45904.6
O08730	O08730	GLYG_RAT	Gyg1	Glycogenin-1	1	RPELGITLTK	RPELGITLTK	2	RPELGITLTK2		3107.91	7442.15
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	RPELIPEDLHR	RPELIPEDLHR	3	RPELIPEDLHR3	19379.9	13447.4	11516
Q5U2Y1	Q5U2Y1	GTF2I_RAT	Gtf2i	General transcription factor II-I	1	RPELLTHSTTEVTQPR	RPELLTHSTTEVTQPR	3	RPELLTHSTTEVTQPR3	3002.92		
Q5U2Y1	Q5U2Y1	GTF2I_RAT	Gtf2i	General transcription factor II-I	1	RPELLTHSTTEVTQPR	RPELLTHSTTEVTQPR	4	RPELLTHSTTEVTQPR4	6957.29	2946.87	
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	RPEMPSK	RPEMPSK	2	RPEMPSK2	46236		63972.6
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	RPEQVLAVGEIERPQK	RPEQVLAVGEIERPQK	3	RPEQVLAVGEIERPQK3	2749.29	4437.35	4818.7
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	RPEQVLAVGEIERPQK	RPEQVLAVGEIERPQK	4	RPEQVLAVGEIERPQK4	12039.5	15760.6	17451.7
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	RPESQGSAPVFK	RPESQGSAPVFK	3	RPESQGSAPVFK3	100952	80730.7	107118
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	RPESSAVPGSLR	RPESSAVPGSLR	3	RPESSAVPGSLR3	91996.4	103728	96530.9
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	RPETSYR	RPETSYR	2	RPETSYR2			13364.8
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	RPETVATQFK	RPETVATQFK	2	RPETVATQFK2	1863.97		2269.46
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	RPETVATQFK	RPETVATQFK	3	RPETVATQFK3	15708.4	18433.5	12414.6
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	RPFFIALGHDEEVSGTK	RPFFIALGHDEEVSGTK	3	RPFFIALGHDEEVSGTK3	27777.1	36714.8	36083.1
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	RPFFIALGHDEEVSGTK	RPFFIALGHDEEVSGTK	4	RPFFIALGHDEEVSGTK4	70865.9	67131.2	46106.5
P48004	P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	1	RPFGISALIVGFDFDGTPR	RPFGISALIVGFDFDGTPR	3	RPFGISALIVGFDFDGTPR3	775963	673489	627507
P48004	P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	1	RPFGISALIVGFDFDGTPR	RPFGISALIVGFDFDGTPR	4	RPFGISALIVGFDFDGTPR4	1471.37		2544.31
A0A8I5ZRT6	A0A8I5ZRT6	A0A8I5ZRT6_RAT	Dock2	Dedicator of cytokinesis 2	1	RPFGVAVMDITDIIK	RPFGVAVMDITDIIK	3	RPFGVAVMDITDIIK3	5922.5	3922.38	3559.86
P21670	P21670	PSA4_RAT	Psma4	Proteasome subunit alpha type-4	1	RPFGVSLLYIGWDK	RPFGVSLLYIGWDK	2	RPFGVSLLYIGWDK2	20589.5	32995	19015.3
P21670	P21670	PSA4_RAT	Psma4	Proteasome subunit alpha type-4	1	RPFGVSLLYIGWDK	RPFGVSLLYIGWDK	3	RPFGVSLLYIGWDK3	512534	585168	451355
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	RPFNPEHTR	RPFNPEHTR	2	RPFNPEHTR2	115728		156760
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	RPFNPEHTR	RPFNPEHTR	3	RPFNPEHTR3	2.24518e+06		2.20381e+06
M0R4M1	M0R4M1	M0R4M1_RAT	Nlrc5	NLR family, CARD domain containing 5	1	RPFQSYGSSPR	RPFQSYGSSPR	3	RPFQSYGSSPR3	3987.49	2802.19	5346.39
O35314	O35314	SCG1_RAT	Chgb	Secretogranin-1	1	RPFSEDVNWGYEK	RPFSEDVNWGYEK	3	RPFSEDVNWGYEK3	18579.5	25164.5	23195.5
B0LT89	B0LT89	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	1	RPFSQCLSTIISPLFAELK	RPFSQC(UniMod:4)LSTIISPLFAELK	3	RPFSQC(UniMod:4)LSTIISPLFAELK3	69164.2	53669.4	66414.8
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	RPFSQNLVNVFK	RPFSQNLVNVFK	2	RPFSQNLVNVFK2	12744.9	10820.9	5679.73
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	RPFSQNLVNVFK	RPFSQNLVNVFK	3	RPFSQNLVNVFK3	119199	123371	127768
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	RPFTIPQVLR	RPFTIPQVLR	3	RPFTIPQVLR3	59142.1	55971.9	52377.9
Q6P6R2	Q6P6R2	DLDH_RAT	Dld	Dihydrolipoyl dehydrogenase, mitochondrial	1	RPFTQNLGLEELGIELDPK	RPFTQNLGLEELGIELDPK	3	RPFTQNLGLEELGIELDPK3	66674	42719.1	34302.1
D3Z9K9	D3Z9K9	D3Z9K9_RAT	Gdpd2	Glycerophosphodiester phosphodiesterase domain containing 2	1	RPFWGAK	RPFWGAK	2	RPFWGAK2	67368.6	66611	63077
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	RPGAAEPSPDGTTGHTYNQYTQR	RPGAAEPSPDGTTGHTYNQYTQR	3	RPGAAEPSPDGTTGHTYNQYTQR3	171952	171705	4.5589e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	RPGAAEPSPDGTTGHTYNQYTQR	RPGAAEPSPDGTTGHTYNQYTQR	4	RPGAAEPSPDGTTGHTYNQYTQR4	278653	343101	324139
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	RPGAALDPGCVIAK	RPGAALDPGC(UniMod:4)VIAK	3	RPGAALDPGC(UniMod:4)VIAK3	18131.4	24259.9	13305.1
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	RPGDAAELQLCQEGIK	RPGDAAELQLC(UniMod:4)QEGIK	3	RPGDAAELQLC(UniMod:4)QEGIK3	28672	24916.7	18581.8
Q9JM80	Q9JM80	PHAG1_RAT	Pag1	Phosphoprotein associated with glycosphingolipid-enriched microdomains 1	1	RPGEEPEPDYEAIQTLNR	RPGEEPEPDYEAIQTLNR	3	RPGEEPEPDYEAIQTLNR3	6466.26	6238.68	4231.45
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	RPGEWSGLEK	RPGEWSGLEK	2	RPGEWSGLEK2	8331.77		
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	RPGEWSGLEK	RPGEWSGLEK	3	RPGEWSGLEK3	12002.2	20161.6	
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	RPGGAGGLPIGDEDEGEEALAEHPAVEPR	RPGGAGGLPIGDEDEGEEALAEHPAVEPR	3	RPGGAGGLPIGDEDEGEEALAEHPAVEPR3	5480.27	4513.46	
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	RPGGAGGLPIGDEDEGEEALAEHPAVEPR	RPGGAGGLPIGDEDEGEEALAEHPAVEPR	4	RPGGAGGLPIGDEDEGEEALAEHPAVEPR4	94241.6	92493.3	101189
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	RPGGPQYGVAR	RPGGPQYGVAR	3	RPGGPQYGVAR3	107783	139008	84041.1
A0A8I6AE91	A0A8I6AE91	A0A8I6AE91_RAT	Gga2	Golgi associated, gamma adaptin ear containing, ARF binding protein 2	1	RPGHALPDQQALQVVYER	RPGHALPDQQALQVVYER	3	RPGHALPDQQALQVVYER3	4140.79	2048.92	4028.16
A0A8I6AE91	A0A8I6AE91	A0A8I6AE91_RAT	Gga2	Golgi associated, gamma adaptin ear containing, ARF binding protein 2	1	RPGHALPDQQALQVVYER	RPGHALPDQQALQVVYER	4	RPGHALPDQQALQVVYER4	15212.8	19350.8	14669.1
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	RPGPEHSLGLEK	RPGPEHSLGLEK	3	RPGPEHSLGLEK3	6925.26	1078.46	4005.63
Q63190	Q63190	EMD_RAT	Emd	Emerin	1	RPGTSLVDADDTFHHQVR	RPGTSLVDADDTFHHQVR	4	RPGTSLVDADDTFHHQVR4	13620.2	9228.31	17403.6
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	RPGVPGAPLPGR	RPGVPGAPLPGR	3	RPGVPGAPLPGR3	14418.6	20806.7	20701.3
Q66HG9	Q66HG9	MAVS_RAT	Mavs	Mitochondrial antiviral-signaling protein	1	RPGWVEVFIR	RPGWVEVFIR	3	RPGWVEVFIR3	80794.9	67792.9	62303
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	RPGYGAYDAFK	RPGYGAYDAFK	2	RPGYGAYDAFK2	16515.7	19184.3	23155
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	RPGYGAYDAFK	RPGYGAYDAFK	3	RPGYGAYDAFK3	68159.6	112761	146664
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	RPHAQQPPPPQQQDR	RPHAQQPPPPQQQDR	3	RPHAQQPPPPQQQDR3			17586.6
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	RPHAQQPPPPQQQDR	RPHAQQPPPPQQQDR	4	RPHAQQPPPPQQQDR4			10828.3
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	RPHETGGYMLECLCLGNGK	RPHETGGYMLEC(UniMod:4)LC(UniMod:4)LGNGK	3	RPHETGGYMLEC(UniMod:4)LC(UniMod:4)LGNGK3	3.23822e+06	4.00154e+06	3.06934e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	RPHETGGYMLECLCLGNGK	RPHETGGYMLEC(UniMod:4)LC(UniMod:4)LGNGK	4	RPHETGGYMLEC(UniMod:4)LC(UniMod:4)LGNGK4	3.87225e+06	3.66088e+06	3.99182e+06
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	RPHFLQSELTAGQLVYAHGGGGTQQDGFR	RPHFLQSELTAGQLVYAHGGGGTQQDGFR	4	RPHFLQSELTAGQLVYAHGGGGTQQDGFR4	38871.7	51959.8	25519.5
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	RPHFLYPK	RPHFLYPK	2	RPHFLYPK2	974541	747532	753925
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	RPHGDTCGINQALGSVAK	RPHGDTC(UniMod:4)GINQALGSVAK	3	RPHGDTC(UniMod:4)GINQALGSVAK3	9933.81	8493.4	11263.8
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	RPHGDTCGINQALGSVAK	RPHGDTC(UniMod:4)GINQALGSVAK	4	RPHGDTC(UniMod:4)GINQALGSVAK4	20675.1	24222.1	13345.1
D4A1Y5	D4A1Y5	D4A1Y5_RAT	Mthfd2	methenyltetrahydrofolate cyclohydrolase	1	RPHLSVILVGDNPASHSYVLNK	RPHLSVILVGDNPASHSYVLNK	4	RPHLSVILVGDNPASHSYVLNK4	46355	60721.1	56846.3
P62997	P62997;A0A8I6AB81	TRA2B_RAT	Tra2b	Transformer-2 protein homolog beta	0	RPHTPTPGIYMGR	RPHTPTPGIYMGR	3	RPHTPTPGIYMGR3	4923.96	1775.93	2627.9
A0A8I5ZS34	M0R4W4;A0A8I5ZS34	A0A8I5ZS34_RAT	Ctdsp1	protein-serine/threonine phosphatase	0	RPHVDEFLQR	RPHVDEFLQR	3	RPHVDEFLQR3	67171	30965.2	49370.3
P47861	P47861	SYT5_RAT	Syt5	Synaptotagmin-5	1	RPIAQWHSLRPPDR	RPIAQWHSLRPPDR	4	RPIAQWHSLRPPDR4	29085.9	38990.1	36493.3
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	RPIHQHIGK	RPIHQHIGK	2	RPIHQHIGK2			4059.34
B4F7E7	B4F7E7	PALS1_RAT	Pals1	Protein PALS1	1	RPIILIGPQNCGQNELR	RPIILIGPQNC(UniMod:4)GQNELR	3	RPIILIGPQNC(UniMod:4)GQNELR3	7349.02	3400.63	9122.3
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	RPILQSLLLPVMDQDYAK	RPILQSLLLPVMDQDYAK	3	RPILQSLLLPVMDQDYAK3	87824.6	110666	71094.8
Q6MG59	Q6MG59	G6B_RAT	Mpig6b	Megakaryocyte and platelet inhibitory receptor G6b	1	RPILWASSSGTPTVLQHFSGR	RPILWASSSGTPTVLQHFSGR	3	RPILWASSSGTPTVLQHFSGR3	136914	114263	131932
Q6MG59	Q6MG59	G6B_RAT	Mpig6b	Megakaryocyte and platelet inhibitory receptor G6b	1	RPILWASSSGTPTVLQHFSGR	RPILWASSSGTPTVLQHFSGR	4	RPILWASSSGTPTVLQHFSGR4	491210	567775	503908
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	RPISADSAIMNPASK	RPISADSAIMNPASK	2	RPISADSAIMNPASK2	53641.1	61903.3	37625.3
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	RPISADSAIMNPASK	RPISADSAIMNPASK	3	RPISADSAIMNPASK3	938786	1.00168e+06	1.05869e+06
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	RPIVEQALYQFSNLLNSK	RPIVEQALYQFSNLLNSK	3	RPIVEQALYQFSNLLNSK3	3396.78	3361.18	9377.19
A0A0G2K5N0	D4ABZ4;A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	0	RPIVVVADTMLR	RPIVVVADTMLR	3	RPIVVVADTMLR3	17879	21310.4	25300.6
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	RPLAHECLGEALR	RPLAHEC(UniMod:4)LGEALR	2	RPLAHEC(UniMod:4)LGEALR2	2536.83	1369.68	1602.63
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	RPLAHECLGEALR	RPLAHEC(UniMod:4)LGEALR	3	RPLAHEC(UniMod:4)LGEALR3	184182	135782	151654
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	RPLAHECLGEALR	RPLAHEC(UniMod:4)LGEALR	4	RPLAHEC(UniMod:4)LGEALR4	507674	458623	473714
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	RPLAQLR	RPLAQLR	2	RPLAQLR2	18291.7	20174.8	22503.9
G3V829	G3V829	G3V829_RAT	Fubp3	Far upstream element binding protein 3	1	RPLDDGVGNQLGALVHQR	RPLDDGVGNQLGALVHQR	3	RPLDDGVGNQLGALVHQR3	14267	4812.13	2178.4
G3V829	G3V829	G3V829_RAT	Fubp3	Far upstream element binding protein 3	1	RPLDDGVGNQLGALVHQR	RPLDDGVGNQLGALVHQR	4	RPLDDGVGNQLGALVHQR4	49310.3	8408.04	3929.62
Q5XIM0	Q5XIM0	Q5XIM0_RAT	Bcs1l	Mitochondrial chaperone BCS1	1	RPLDSVVLQQGLADR	RPLDSVVLQQGLADR	3	RPLDSVVLQQGLADR3	9730.19	9598.45	5193.98
A0A8I6ABJ7	A0A8I6ABJ7	A0A8I6ABJ7_RAT	Rel	REL proto-oncogene, NF-kB subunit	1	RPLFFQNLGIR	RPLFFQNLGIR	3	RPLFFQNLGIR3	5190.28	3018.35	3054.42
D4ABI7	D4ABI7	D4ABI7_RAT	Hacd3	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase	1	RPLFLAPDFDR	RPLFLAPDFDR	3	RPLFLAPDFDR3	30140.7	11509.7	10176.4
Q9JI03	Q9JI03	CO5A1_RAT	Col5a1	Collagen alpha-1(V) chain	1	RPLGTQQNPAR	RPLGTQQNPAR	3	RPLGTQQNPAR3	46130.1		43110.3
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	RPLGVDVQR	RPLGVDVQR	2	RPLGVDVQR2	8252.26	1349.86	
A0A8I5ZT10	A0A8I5ZT10	A0A8I5ZT10_RAT	Ccm2	CCM2 scaffold protein	1	RPLHTVVLALPER	RPLHTVVLALPER	3	RPLHTVVLALPER3	28385.3	29759.7	19298.9
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	RPLIDQVVQTALSETQDPEEVSVTVK	RPLIDQVVQTALSETQDPEEVSVTVK	3	RPLIDQVVQTALSETQDPEEVSVTVK3	267114	288925	274963
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	RPLIDQVVQTALSETQDPEEVSVTVK	RPLIDQVVQTALSETQDPEEVSVTVK	4	RPLIDQVVQTALSETQDPEEVSVTVK4	31242.8	42835.6	19010.5
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	RPLILQLIFSK	RPLILQLIFSK	2	RPLILQLIFSK2	9991.04	4991.11	
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	RPLILQLIFSK	RPLILQLIFSK	3	RPLILQLIFSK3	34789.9	43512	30171.4
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	RPLILQLVHVSPEDK	RPLILQLVHVSPEDK	3	RPLILQLVHVSPEDK3	35979.4	36943.4	34829.6
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	RPLILQLVHVSPEDK	RPLILQLVHVSPEDK	4	RPLILQLVHVSPEDK4	71162.7	70834.8	91350.7
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	RPLILQLVHVSPEDKR	RPLILQLVHVSPEDKR	4	RPLILQLVHVSPEDKR4	17123.3	13813.6	13376.9
Q6XUX2	Q6XUX2	DUSTY_RAT	Dstyk	Dual serine/threonine and tyrosine protein kinase	1	RPLLGIVQPILR	RPLLGIVQPILR	3	RPLLGIVQPILR3	15044.9	13979.8	17549.6
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	RPLLVLGSQALLPPTPANK	RPLLVLGSQALLPPTPANK	3	RPLLVLGSQALLPPTPANK3	104737	96767.9	96519.5
D3ZGL3	D3ZGL3	D3ZGL3_RAT	Hhip	Hedgehog-interacting protein	1	RPLMPEECR	RPLMPEEC(UniMod:4)R	3	RPLMPEEC(UniMod:4)R3	1286.38	3224.56	
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	RPLPCTPGDCPSR	RPLPC(UniMod:4)TPGDC(UniMod:4)PSR	3	RPLPC(UniMod:4)TPGDC(UniMod:4)PSR3	50271.9	47329.1	63471.9
D3ZE72	D3ZE72	D3ZE72_RAT	Metap1	Methionine aminopeptidase	1	RPLQEGDIVNVDITLYR	RPLQEGDIVNVDITLYR	3	RPLQEGDIVNVDITLYR3	3988.58	3793.92	5844.87
F1LQI6	F1LQI6	F1LQI6_RAT	Zer1	Zyg-11 related, cell cycle regulator	1	RPLQFLGLFETSLCR	RPLQFLGLFETSLC(UniMod:4)R	3	RPLQFLGLFETSLC(UniMod:4)R3	2095.55	795.206	4130.88
O88959	O88959	INHBE_RAT	Inhbe	Inhibin beta E chain	1	RPLSLLYLDHNGNVVK	RPLSLLYLDHNGNVVK	3	RPLSLLYLDHNGNVVK3	9616.92	8246.14	5273.32
O88959	O88959	INHBE_RAT	Inhbe	Inhibin beta E chain	1	RPLSLLYLDHNGNVVK	RPLSLLYLDHNGNVVK	4	RPLSLLYLDHNGNVVK4	12375.7	16728	6555.04
Q9WUK5	Q9WUK5	INHBC_RAT	Inhbc	Inhibin beta C chain	1	RPLSLLYYDRDSNIVK	RPLSLLYYDRDSNIVK	4	RPLSLLYYDRDSNIVK4	4359.22		
P98166	P98166	VLDLR_RAT	Vldlr	Very low-density lipoprotein receptor	1	RPLVTEDIQWPNGITLDLVK	RPLVTEDIQWPNGITLDLVK	3	RPLVTEDIQWPNGITLDLVK3	22527.7	23187	22314
A0A8I5ZTW6	A0A8I5ZTW6	A0A8I5ZTW6_RAT	Gopc	Golgi associated PDZ and coiled-coil motif containing	1	RPMQAPPGHDQDSLKK	RPMQAPPGHDQDSLKK	4	RPMQAPPGHDQDSLKK4	15677.5	15527.4	11967.5
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	RPMSDPSWNR	RPMSDPSWNR	3	RPMSDPSWNR3	36862.3	49397.1	40462.7
A0A8I6AEI1	A0A8I6AEI1	A0A8I6AEI1_RAT	Hps1	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1	1	RPMSSQNIPVQQPR	RPMSSQNIPVQQPR	3	RPMSSQNIPVQQPR3	44366.5	42595.7	43395.5
F7FNG5	D3ZK73;F7FNG5	F7FNG5_RAT	Cul4a	Cullin 4A	0	RPNKPAELIAK	RPNKPAELIAK	3	RPNKPAELIAK3	7406.5	5142.43	2663.53
B0BNM1	B0BNM1	NNRE_RAT	Naxe	NAD(P)H-hydrate epimerase	1	RPNKPLFTGLVTQCQK	RPNKPLFTGLVTQC(UniMod:4)QK	3	RPNKPLFTGLVTQC(UniMod:4)QK3	23282.2	20468.4	12082
B0BNM1	B0BNM1	NNRE_RAT	Naxe	NAD(P)H-hydrate epimerase	1	RPNKPLFTGLVTQCQK	RPNKPLFTGLVTQC(UniMod:4)QK	4	RPNKPLFTGLVTQC(UniMod:4)QK4	44444.3	39986.8	33568.8
A0A0G2K089	A0A0G2K089	A0A0G2K089_RAT	Dennd4c	DENN domain containing 4C	1	RPNPPPVSVPYLSPLVLR	RPNPPPVSVPYLSPLVLR	3	RPNPPPVSVPYLSPLVLR3	13112.2	12453.4	11485.6
P11348	P11348	DHPR_RAT	Qdpr	Dihydropteridine reductase	1	RPNSGSLIQVVTTDGK	RPNSGSLIQVVTTDGK	3	RPNSGSLIQVVTTDGK3	36608.6	49476.9	40677.7
P54777	P54777	PEX6_RAT	Pex6	Peroxisomal ATPase PEX6	1	RPPALGWALLGTSPGPGLGPR	RPPALGWALLGTSPGPGLGPR	3	RPPALGWALLGTSPGPGLGPR3	6504.46	3356.94	10462
A0A8I6GIH3	A0A8I6GIH3	A0A8I6GIH3_RAT	Pigt	Phosphatidylinositol glycan anchor biosynthesis, class T	1	RPPDNEALPVPFLHAQR	RPPDNEALPVPFLHAQR	4	RPPDNEALPVPFLHAQR4	5503.64		7199.16
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	RPPEVFEQEIR	RPPEVFEQEIR	2	RPPEVFEQEIR2	8384.57	5808.22	9378.81
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	RPPEVFEQEIR	RPPEVFEQEIR	3	RPPEVFEQEIR3	407939	396942	407835
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	RPPGFSPFR	RPPGFSPFR	2	RPPGFSPFR2	706200	520395	484075
B0BNI5	B0BNI5	OLFL3_RAT	Olfml3	Olfactomedin-like protein 3	1	RPPGGAGGGGELENTLQLIK	RPPGGAGGGGELENTLQLIK	3	RPPGGAGGGGELENTLQLIK3	10884.3	16100.7	18552.5
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	RPPGVLHCTTK	RPPGVLHC(UniMod:4)TTK	2	RPPGVLHC(UniMod:4)TTK2	1800.98		
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	RPPGVLHCTTK	RPPGVLHC(UniMod:4)TTK	3	RPPGVLHC(UniMod:4)TTK3	72258.5	56122.6	45042.1
Q3KR59	Q3KR59	UBP10_RAT	Usp10	Ubiquitin carboxyl-terminal hydrolase 10	1	RPPGYYSYLK	RPPGYYSYLK	3	RPPGYYSYLK3	13078.4	9096.34	11216.9
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	RPPLCFHNGVQYR	RPPLC(UniMod:4)FHNGVQYR	2	RPPLC(UniMod:4)FHNGVQYR2	31294.8	23472.3	29743.3
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	RPPLCFHNGVQYR	RPPLC(UniMod:4)FHNGVQYR	3	RPPLC(UniMod:4)FHNGVQYR3	1.33331e+06	1.37434e+06	1.24483e+06
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	RPPLCFHNGVQYR	RPPLC(UniMod:4)FHNGVQYR	4	RPPLC(UniMod:4)FHNGVQYR4	7.10366e+06	7.93982e+06	8.93196e+06
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	RPPLQEYVR	RPPLQEYVR	3	RPPLQEYVR3	13382.7	20707.9	13865.1
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	RPPPPYPGSGK	RPPPPYPGSGK	3	RPPPPYPGSGK3	11523.8	6402.64	7074.61
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	RPPPPYPGSGKPATTSAQQPLEPPLWR	RPPPPYPGSGKPATTSAQQPLEPPLWR	3	RPPPPYPGSGKPATTSAQQPLEPPLWR3	5859.81	10309.6	6360.8
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	RPPPPYPGSGKPATTSAQQPLEPPLWR	RPPPPYPGSGKPATTSAQQPLEPPLWR	4	RPPPPYPGSGKPATTSAQQPLEPPLWR4	64898.6	97961.5	75173.7
Q6MG51	Q6MG51	CF047_RAT	G4	Uncharacterized protein C6orf47 homolog	1	RPPQAAPESSR	RPPQAAPESSR	3	RPPQAAPESSR3			22399
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	RPPQECCPPELGR	RPPQEC(UniMod:4)C(UniMod:4)PPELGR	3	RPPQEC(UniMod:4)C(UniMod:4)PPELGR3	328692	361854	384331
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	RPPQECCPPELGRR	RPPQEC(UniMod:4)C(UniMod:4)PPELGRR	4	RPPQEC(UniMod:4)C(UniMod:4)PPELGRR4	33743.1	33983.5	25994.1
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	RPPQPIQQPPR	RPPQPIQQPPR	3	RPPQPIQQPPR3	109734	71292.3	113183
P52925	P52925;D3ZN59;D3ZS25	HMGB2_RAT	Hmgb2	High mobility group protein B2	0	RPPSAFFLFCSEHRPK	RPPSAFFLFC(UniMod:4)SEHRPK	4	RPPSAFFLFC(UniMod:4)SEHRPK4	7726.74	4684.43	5746.09
P63159	A0A8I6GBU6;A0A8I6GKR4;D3ZIU9;P63159;A0A8I6GJ73;A0A8I6A2H1;A0A8I5Y7D7;A0A0G2K6P4	HMGB1_RAT	Hmgb1	High mobility group protein B1	0	RPPSAFFLFCSEYRPK	RPPSAFFLFC(UniMod:4)SEYRPK	4	RPPSAFFLFC(UniMod:4)SEYRPK4	9273.56	6162.8	13362.9
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	RPPSPIK	RPPSPIK	2	RPPSPIK2	9169.52	13615.7	5789.26
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	RPPSYPESYFQR	RPPSYPESYFQR	3	RPPSYPESYFQR3	18653.2	31777.1	29968.8
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	RPPTAPENTPSVPSGVK	RPPTAPENTPSVPSGVK	3	RPPTAPENTPSVPSGVK3	34362.4	47500.9	33151.4
Q80Z30	Q80Z30	PPM1E_RAT	Ppm1e	Protein phosphatase 1E	1	RPQIYYETSIHAIK	RPQIYYETSIHAIK	3	RPQIYYETSIHAIK3	9369.34	12086.8	7048.35
Q80Z30	Q80Z30	PPM1E_RAT	Ppm1e	Protein phosphatase 1E	1	RPQIYYETSIHAIK	RPQIYYETSIHAIK	4	RPQIYYETSIHAIK4	25317.9	24084.1	24071.7
A0A8I6AHW7	A0A8I6AHW7	A0A8I6AHW7_RAT	Smap1	Small ArfGAP 1	1	RPQTDQAVEFFIR	RPQTDQAVEFFIR	3	RPQTDQAVEFFIR3	23764.2	14438.9	27011.3
Q5EB81	Q5EB81	NB5R1_RAT	Cyb5r1	NADH-cytochrome b5 reductase 1	1	RPQVTLQDPDEK	RPQVTLQDPDEK	3	RPQVTLQDPDEK3	7500.04	10927.7	10162.7
P62961	A0A8I5ZRA5;A0A8I6GL75;P62961;D3ZEV0	YBOX1_RAT	Ybx1	Y-box-binding protein 1	0	RPQYSNPPVQGEVMEGADNQGAGEQGR	RPQYSNPPVQGEVMEGADNQGAGEQGR	3	RPQYSNPPVQGEVMEGADNQGAGEQGR3	3254.2	4699.47	4029.08
P62961	A0A8I5ZRA5;A0A8I6GL75;P62961;D3ZEV0	YBOX1_RAT	Ybx1	Y-box-binding protein 1	0	RPQYSNPPVQGEVMEGADNQGAGEQGRPVR	RPQYSNPPVQGEVMEGADNQGAGEQGRPVR	4	RPQYSNPPVQGEVMEGADNQGAGEQGRPVR4	79573	60189.9	68027.7
D3ZBU5	D3ZBU5	D3ZBU5_RAT	Aff1	AF4/FMR2 family, member 1	1	RPRPDADIGSQDPPR	RPRPDADIGSQDPPR	3	RPRPDADIGSQDPPR3	5070.39	7851.32	8318.13
D3ZBU5	D3ZBU5	D3ZBU5_RAT	Aff1	AF4/FMR2 family, member 1	1	RPRPDADIGSQDPPR	RPRPDADIGSQDPPR	4	RPRPDADIGSQDPPR4			5823.48
Q8K3V3	Q8K3V3	AGRG1_RAT	Adgrg1	Adhesion G-protein coupled receptor G1	1	RPSAAFISQQLQNLESK	RPSAAFISQQLQNLESK	3	RPSAAFISQQLQNLESK3	15084	16310.1	14505.3
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	RPSALSQGHGQDLLGR	RPSALSQGHGQDLLGR	3	RPSALSQGHGQDLLGR3	354143	326458	337736
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	RPSALSQGHGQDLLGR	RPSALSQGHGQDLLGR	4	RPSALSQGHGQDLLGR4	931210	1.00609e+06	1.07108e+06
P09606	P09606	GLNA_RAT	Glul	Glutamine synthetase	1	RPSANCDPYAVTEAIVR	RPSANC(UniMod:4)DPYAVTEAIVR	3	RPSANC(UniMod:4)DPYAVTEAIVR3	5990.61	4843.13	7273.08
Q5U2R7	Q5U2R7	MESD_RAT	Mesd	LRP chaperone MESD	1	RPSAPIDFSK	RPSAPIDFSK	2	RPSAPIDFSK2	9923.29	13428.6	13064.6
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	RPSAVPVK	RPSAVPVK	2	RPSAVPVK2	120605	112665	82793.2
D4A544	D4A544	D4A544_RAT	Dennd6a	DENN domain containing 6A	1	RPSEAQSVILR	RPSEAQSVILR	3	RPSEAQSVILR3	6369.2	5955.33	
Q66HG5	Q66HG5	TM9S2_RAT	Tm9sf2	Transmembrane 9 superfamily member 2	1	RPSENLGQVLFGER	RPSENLGQVLFGER	3	RPSENLGQVLFGER3	136097	143664	161572
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	RPSFYDGDLVMFSDIEGMVELNSHSPQPVR	RPSFYDGDLVMFSDIEGMVELNSHSPQPVR	4	RPSFYDGDLVMFSDIEGMVELNSHSPQPVR4	9277.89	9152.44	
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	RPSGEQVPIR	RPSGEQVPIR	2	RPSGEQVPIR2	3180.15		
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	RPSGEQVPIRR	RPSGEQVPIRR	3	RPSGEQVPIRR3	2788.43	4535.23	3791.21
A0A8I6AAX0	A0A0G2JZS9;A0A8I6AAX0	A0A8I6AAX0_RAT	ENSRNOG00000064181	Ig-like domain-containing protein	0	RPSGISDR	RPSGISDR	2	RPSGISDR2			21990.6
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	RPSGPTELGAWHALHSVTPR	RPSGPTELGAWHALHSVTPR	3	RPSGPTELGAWHALHSVTPR3	2554.63	3551.53	3664.69
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	RPSGPTELGAWHALHSVTPR	RPSGPTELGAWHALHSVTPR	4	RPSGPTELGAWHALHSVTPR4	75280.2	107555	88790.3
D4A4T9	D4A4T9	CHRD1_RAT	Chordc1	Cysteine and histidine-rich domain-containing protein 1	1	RPSPDEPMTNLELK	RPSPDEPMTNLELK	3	RPSPDEPMTNLELK3	47059.1	47747.2	39103.7
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	RPSQNAISFFNVGHSK	RPSQNAISFFNVGHSK	3	RPSQNAISFFNVGHSK3	15462.1	13311.5	12325.3
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	RPSQNAISFFNVGHSK	RPSQNAISFFNVGHSK	4	RPSQNAISFFNVGHSK4	2964.4	12380.2	4740.03
D4A4Y3	D4A4Y3	D4A4Y3_RAT	Ms4a1	Membrane spanning 4-domains A1	1	RPSSLVGPTQSFFMR	RPSSLVGPTQSFFMR	3	RPSSLVGPTQSFFMR3	5662.57	4297.02	3135.76
D3ZVC4	D3ZVC4	D3ZVC4_RAT	Arel1	Apoptosis resistant E3 ubiquitin protein ligase 1	1	RPSTALEEEEEDSPSECHTPEK	RPSTALEEEEEDSPSEC(UniMod:4)HTPEK	4	RPSTALEEEEEDSPSEC(UniMod:4)HTPEK4	3473.38	2942.46	
A1KQY6	A1KQY6	A1KQY6_RAT	St8sia4	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	1	RPSTGLLMYTLATR	RPSTGLLMYTLATR	3	RPSTGLLMYTLATR3	36925.8	34463.3	27528.7
B5DEP5	B5DEP5	B5DEP5_RAT	Trip4	Thyroid hormone receptor interactor 4	1	RPSTQEVSELQATYR	RPSTQEVSELQATYR	3	RPSTQEVSELQATYR3	12736.6	6243.59	11676.4
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	RPSVSFAEGTK	RPSVSFAEGTK	2	RPSVSFAEGTK2	4244.71	2024.34	3648.1
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	RPSVSFAEGTK	RPSVSFAEGTK	3	RPSVSFAEGTK3	30147.4	21247.6	30028.6
O88506	O88506	STK39_RAT	Stk39	STE20/SPS1-related proline-alanine-rich protein kinase	1	RPTAAELLK	RPTAAELLK	2	RPTAAELLK2			15307
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	RPTADALLDLPLLR	RPTADALLDLPLLR	3	RPTADALLDLPLLR3	30098.5	27732	21797.6
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	RPTEICADPQFIIGGATR	RPTEIC(UniMod:4)ADPQFIIGGATR	3	RPTEIC(UniMod:4)ADPQFIIGGATR3	3.29756e+06	3.91597e+06	3.96402e+06
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	RPTEICADPQFIIGGATR	RPTEIC(UniMod:4)ADPQFIIGGATR	4	RPTEIC(UniMod:4)ADPQFIIGGATR4	16473.5	17348.3	12954.8
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	RPTELLSNPQFIVDGATR	RPTELLSNPQFIVDGATR	3	RPTELLSNPQFIVDGATR3	271182	246007	247947
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	RPTFEGHIEICPPGMSHSACSVNK	RPTFEGHIEIC(UniMod:4)PPGMSHSAC(UniMod:4)SVNK	4	RPTFEGHIEIC(UniMod:4)PPGMSHSAC(UniMod:4)SVNK4	24120.2	20298.9	16069.1
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	RPTGDFGFSLR	RPTGDFGFSLR	3	RPTGDFGFSLR3	8876.86	10174.3	10523.3
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	RPTLAWLEDSSSCSDIPK	RPTLAWLEDSSSC(UniMod:4)SDIPK	3	RPTLAWLEDSSSC(UniMod:4)SDIPK3	17491	13406	12370.5
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	RPTPTFHSSR	RPTPTFHSSR	3	RPTPTFHSSR3	27146.8	30447.3	47020.6
P16573	P16573	CEAM1_RAT	Ceacam1	Carcinoembryonic antigen-related cell adhesion molecule 1	1	RPTSASSSPTETVYSVVK	RPTSASSSPTETVYSVVK	2	RPTSASSSPTETVYSVVK2	2491.76	2861.61	997.064
P16573	P16573	CEAM1_RAT	Ceacam1	Carcinoembryonic antigen-related cell adhesion molecule 1	1	RPTSASSSPTETVYSVVK	RPTSASSSPTETVYSVVK	3	RPTSASSSPTETVYSVVK3	214269	197316	213365
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	RPTSFADELAAR	RPTSFADELAAR	3	RPTSFADELAAR3	37644.5	31758.1	39050.6
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	RPTSLSR	RPTSLSR	2	RPTSLSR2			18866.4
Q07977	Q07977	SIA8B_RAT	St8sia2	Alpha-2,8-sialyltransferase 8B	1	RPTTGLLMYTLATR	RPTTGLLMYTLATR	3	RPTTGLLMYTLATR3	1083.91	3573.73	4171.66
D3ZG43	D3ZG43	D3ZG43_RAT	Ndufs3	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial	1	RPTVRPSSDVTHK	RPTVRPSSDVTHK	3	RPTVRPSSDVTHK3			3911.63
Q04589	Q04589	FGFR1_RAT	Fgfr1	Fibroblast growth factor receptor 1	1	RPVAPYWTSPEK	RPVAPYWTSPEK	3	RPVAPYWTSPEK3	10583.6	30871.5	23667.2
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	RPVDEYEQCYLAR	RPVDEYEQC(UniMod:4)YLAR	2	RPVDEYEQC(UniMod:4)YLAR2	6010.29	506.499	3185.53
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	RPVDEYEQCYLAR	RPVDEYEQC(UniMod:4)YLAR	3	RPVDEYEQC(UniMod:4)YLAR3	192768	227351	230525
D4A929	D4A929	WDR81_RAT	Wdr81	WD repeat-containing protein 81	1	RPVDPTLLEELQK	RPVDPTLLEELQK	3	RPVDPTLLEELQK3	3183.88	3600.03	2945.44
Q4V897	Q4V897	CC90B_RAT	Ccdc90b	Coiled-coil domain-containing protein 90B, mitochondrial	1	RPVEITPLEQR	RPVEITPLEQR	3	RPVEITPLEQR3	38095.7	37278.9	39261.3
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	RPVFIFEWLR	RPVFIFEWLR	3	RPVFIFEWLR3	16219.5	8125.24	10958.9
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	RPVFVSSNDVEQK	RPVFVSSNDVEQK	3	RPVFVSSNDVEQK3	9416.47	14345.1	9493.79
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	RPVGASFSFGGK	RPVGASFSFGGK	3	RPVGASFSFGGK3	39757.6	42045.5	32105.7
D4A914	D4A914	D4A914_RAT	Xrn2	5'-3' exoribonuclease	1	RPVHLDQAAFR	RPVHLDQAAFR	3	RPVHLDQAAFR3	12492.9	2462.62	943.304
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	RPVILEVTPGGFDQINPVTNR	RPVILEVTPGGFDQINPVTNR	3	RPVILEVTPGGFDQINPVTNR3	16050.8	11673.8	27360.7
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	RPVINAGDGVGEHPTQALLDIFTIR	RPVINAGDGVGEHPTQALLDIFTIR	4	RPVINAGDGVGEHPTQALLDIFTIR4	35516.8	20359.8	11598.5
Q566R4	Q566R4	LRA25_RAT	Fam89b	Leucine repeat adapter protein 25	1	RPVNLDSALAALR	RPVNLDSALAALR	3	RPVNLDSALAALR3	21780.5	17744.6	19266.6
Q566R4	Q566R4	LRA25_RAT	Fam89b	Leucine repeat adapter protein 25	1	RPVNLDSALAALRK	RPVNLDSALAALRK	3	RPVNLDSALAALRK3	10845.9	14903.6	18816.9
Q566R4	Q566R4	LRA25_RAT	Fam89b	Leucine repeat adapter protein 25	1	RPVNLDSALAALRK	RPVNLDSALAALRK	4	RPVNLDSALAALRK4	5604.1	5551.81	4926.92
P15384	P15384	KCNA3_RAT	Kcna3	Potassium voltage-gated channel subfamily A member 3	1	RPVNVPIDIFSEEIR	RPVNVPIDIFSEEIR	3	RPVNVPIDIFSEEIR3	353987	389775	469138
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	RPVPISYHQLEAFYSIFTTEQQDHVK	RPVPISYHQLEAFYSIFTTEQQDHVK	4	RPVPISYHQLEAFYSIFTTEQQDHVK4	131330	181121	186828
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	RPVPPEVAQQYQDVVQR	RPVPPEVAQQYQDVVQR	3	RPVPPEVAQQYQDVVQR3	17957.3	25024.5	22048.5
D3ZAL7	D3ZAL7	D3ZAL7_RAT	Gab1	GRB2-associated binding protein 1	1	RPVPVADCEPPPVDR	RPVPVADC(UniMod:4)EPPPVDR	3	RPVPVADC(UniMod:4)EPPPVDR3	8775.06	3025.56	6046.65
D4A131	D4A131	D4A131_RAT	Mrpl4	Mitochondrial ribosomal protein L4	1	RPVQAWVESLR	RPVQAWVESLR	3	RPVQAWVESLR3	11873.2	10004.2	10262.1
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	RPVSAVGYK	RPVSAVGYK	2	RPVSAVGYK2	2135.73	1373.39	4197.11
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	RPVSVSPSSSQEISENQYAVICSEK	RPVSVSPSSSQEISENQYAVIC(UniMod:4)SEK	3	RPVSVSPSSSQEISENQYAVIC(UniMod:4)SEK3	3413.32	2795.53	7155.45
F1M8Y4	F1M8Y4	F1M8Y4_RAT	Deptor	DEP domain containing MTOR-interacting protein	1	RPVTSEELLTPGAPYAR	RPVTSEELLTPGAPYAR	3	RPVTSEELLTPGAPYAR3	4330.9	6016.71	
P0C5W1	P0C5W1	MAP1S_RAT	Map1s	Microtubule-associated protein 1S	1	RPVVTTQDLEVPSR	RPVVTTQDLEVPSR	3	RPVVTTQDLEVPSR3	48771.8	50461.8	49026.2
P04905	P04905;P08009	GSTM1_RAT	Gstm1	Glutathione S-transferase Mu 1	0	RPWFAGDK	RPWFAGDK	2	RPWFAGDK2	3779.27		
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	RPWILTSLHNGVIQLWDYR	RPWILTSLHNGVIQLWDYR	3	RPWILTSLHNGVIQLWDYR3	22443.3	19719.7	23385.8
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	RPWILTSLHNGVIQLWDYR	RPWILTSLHNGVIQLWDYR	4	RPWILTSLHNGVIQLWDYR4	64538.5	42713	42242.5
A0A8I5ZSU2	A0A8I5ZSU2	A0A8I5ZSU2_RAT	Ccm2l	CCM2 like scaffold protein	1	RPWLSSCSESCR	RPWLSSC(UniMod:4)SESC(UniMod:4)R	3	RPWLSSC(UniMod:4)SESC(UniMod:4)R3	4610.46	3719.97	4789.09
A0A8I6ARV9	A0A8I6ARV9	A0A8I6ARV9_RAT	Ctsa	Carboxypeptidase	1	RPWLVDYGESGEQVAGFVK	RPWLVDYGESGEQVAGFVK	3	RPWLVDYGESGEQVAGFVK3	45646.7	46233.2	40155.7
Q80Z30	Q80Z30	PPM1E_RAT	Ppm1e	Protein phosphatase 1E	1	RPWPQHQCSAPADLGYEGR	RPWPQHQC(UniMod:4)SAPADLGYEGR	4	RPWPQHQC(UniMod:4)SAPADLGYEGR4	34342.9	37199.2	29491.7
P43424	P43424	GALT_RAT	Galt	Galactose-1-phosphate uridylyltransferase	1	RPWQGQVEPQLLK	RPWQGQVEPQLLK	3	RPWQGQVEPQLLK3	4263.66	5433.33	7207.59
G3V9R2	Q5FVP9;G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	0	RPYFPVPIGK	RPYFPVPIGK	2	RPYFPVPIGK2	111766	76478.7	84021.7
G3V9R2	Q5FVP9;G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	0	RPYFPVPIGK	RPYFPVPIGK	3	RPYFPVPIGK3	453888	402602	407877
Q5RK30	Q5RK30	SBDS_RAT	Sbds	Ribosome maturation protein SBDS	1	RPYTVILIER	RPYTVILIER	3	RPYTVILIER3	3019.96		11312.6
P04638	P04638	APOA2_RAT	Apoa2	Apolipoprotein A-II	1	RQAAETDVQTLFSQYLQSLTDYGK	RQAAETDVQTLFSQYLQSLTDYGK	3	RQAAETDVQTLFSQYLQSLTDYGK3	27593.8	31500	15782.6
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	RQAAHTLDPGKVPEEEK	RQAAHTLDPGKVPEEEK	4	RQAAHTLDPGKVPEEEK4	7764.73	5122.98	11478.9
P23764	P23764	GPX3_RAT	Gpx3	Glutathione peroxidase 3	1	RQAALGAR	RQAALGAR	2	RQAALGAR2			53546.6
D3ZL11	D3ZL11	D3ZL11_RAT	Rbsn	Rabenosyn, RAB effector	1	RQAEEEELQR	RQAEEEELQR	3	RQAEEEELQR3	52410.5	9650.6	13023.1
B1WBT4	B1WBT4;Q4KLN3	B1WBT4_RAT	Srpk2	SRSF protein kinase 2	0	RQAELLEK	RQAELLEK	2	RQAELLEK2	9682.02	11578.6	5051.36
P63324	A0A8I6GKR8;A0A8I5ZX29;D3ZHB3;P63324;A0A8I6AKK1	RS12_RAT	Rps12	Small ribosomal subunit protein eS12	0	RQAHLCVLASNCDEPMYVK	RQAHLC(UniMod:4)VLASNC(UniMod:4)DEPMYVK	4	RQAHLC(UniMod:4)VLASNC(UniMod:4)DEPMYVK4	5061.03	11499	
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	RQAQQERDELADEIANSSGK	RQAQQERDELADEIANSSGK	3	RQAQQERDELADEIANSSGK3	334928	404794	328672
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	RQAQQERDELADEIANSSGK	RQAQQERDELADEIANSSGK	4	RQAQQERDELADEIANSSGK4	31181.7	58452.4	48899.3
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	RQAQSPAGVSSEVEVLK	RQAQSPAGVSSEVEVLK	3	RQAQSPAGVSSEVEVLK3	8860.71	13886.7	8672.65
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	RQAVDTTVNGVSIR	RQAVDTTVNGVSIR	2	RQAVDTTVNGVSIR2	136854	179999	134397
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	RQAVDTTVNGVSIR	RQAVDTTVNGVSIR	3	RQAVDTTVNGVSIR3	9.05483e+06	1.11668e+07	1.08199e+07
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	RQAVTNPNNTFYATK	RQAVTNPNNTFYATK	3	RQAVTNPNNTFYATK3	21155.6	25217.6	24830.1
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	RQAYESNLISHGLQLEATR	RQAYESNLISHGLQLEATR	3	RQAYESNLISHGLQLEATR3	16937.3	36466.6	21814.2
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	RQAYESNLISHGLQLEATR	RQAYESNLISHGLQLEATR	4	RQAYESNLISHGLQLEATR4	156175	180824	165444
A0A8I6ARU6	A0A8I6ARU6	A0A8I6ARU6_RAT	Galk1	Galactokinase 1	1	RQCEEVAQALGK	RQC(UniMod:4)EEVAQALGK	3	RQC(UniMod:4)EEVAQALGK3	5457.16	4660.17	
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	RQCNNPAPQNGGAPCLGK	RQC(UniMod:4)NNPAPQNGGAPC(UniMod:4)LGK	3	RQC(UniMod:4)NNPAPQNGGAPC(UniMod:4)LGK3	4292.97	5214.59	14043.4
E9PU03	E9PU03	E9PU03_RAT	Smg5	Nonsense-mediated mRNA decay factor	1	RQDADAWTLYK	RQDADAWTLYK	3	RQDADAWTLYK3		7807.43	4296.19
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	RQDEEDGSLKDR	RQDEEDGSLKDR	3	RQDEEDGSLKDR3			4039.36
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	RQDFNPSEYDLK	RQDFNPSEYDLK	3	RQDFNPSEYDLK3	24400.1	30707.4	25368.1
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	RQDGSVNFFTNWQHYK	RQDGSVNFFTNWQHYK	4	RQDGSVNFFTNWQHYK4	101173	91949.5	95722
O88658	O88658	KIF1B_RAT	Kif1b	Kinesin-like protein KIF1B	1	RQDIVLSGAHIK	RQDIVLSGAHIK	3	RQDIVLSGAHIK3	18738.4	13856.3	
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	RQDLEDSLQAQQYFADANEAESWMR	RQDLEDSLQAQQYFADANEAESWMR	4	RQDLEDSLQAQQYFADANEAESWMR4	4678.83	10210.1	8975.35
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	RQDLEVEVKDEQHQCSLGSLR	RQDLEVEVKDEQHQC(UniMod:4)SLGSLR	4	RQDLEVEVKDEQHQC(UniMod:4)SLGSLR4	5340.65	3102.6	8855.15
P07943	P07943;A0A8I6A068	ALDR_RAT	Akr1b1	Aldo-keto reductase family 1 member B1	0	RQDLFIVSK	RQDLFIVSK	2	RQDLFIVSK2		2464.04	3983.62
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	RQDLLNVLAR	RQDLLNVLAR	2	RQDLLNVLAR2	6051.85	4698.5	4182.07
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	RQDLLNVLAR	RQDLLNVLAR	3	RQDLLNVLAR3	35043.6	34000.8	19786.8
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	RQDQLQLLIEEQDLER	RQDQLQLLIEEQDLER	3	RQDQLQLLIEEQDLER3	74749.3	78715.2	70666
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	RQDQLQLLIEEQDLERR	RQDQLQLLIEEQDLERR	3	RQDQLQLLIEEQDLERR3	1857.63		
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	RQDQLQLLIEEQDLERR	RQDQLQLLIEEQDLERR	4	RQDQLQLLIEEQDLERR4	24334.6	20010.3	45777.7
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	RQDSLESMK	RQDSLESMK	2	RQDSLESMK2	2065.59		2732.51
Q5U2X5	Q5U2X5	ACK1_RAT	Tnk2	Activated CDC42 kinase 1	1	RQEAEFPSHHSQSTFR	RQEAEFPSHHSQSTFR	4	RQEAEFPSHHSQSTFR4	3326.4	11128.9	3290.17
P01026	P01026	CO3_RAT	C3	Complement C3	1	RQEALELIK	RQEALELIK	2	RQEALELIK2	1.13016e+06	1.10724e+06	1.04218e+06
P01026	P01026	CO3_RAT	C3	Complement C3	1	RQEALELIKK	RQEALELIKK	2	RQEALELIKK2	18127.2	10439.9	11737.1
P01026	P01026	CO3_RAT	C3	Complement C3	1	RQEALELIKK	RQEALELIKK	3	RQEALELIKK3	1.20733e+06	1.37672e+06	1.38268e+06
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	RQEEELRQLEEAER	RQEEELRQLEEAER	3	RQEEELRQLEEAER3	3688.06	5092.85	2642.32
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	RQEELNNQLFLYDTHQNLR	RQEELNNQLFLYDTHQNLR	3	RQEELNNQLFLYDTHQNLR3	4729.1	4326.31	
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	RQEELNNQLFLYDTHQNLR	RQEELNNQLFLYDTHQNLR	4	RQEELNNQLFLYDTHQNLR4	9441.4	21145.6	14731.8
D4A731	D4A731	D4A731_RAT	Ankib1	RBR-type E3 ubiquitin transferase	1	RQEFLASVAR	RQEFLASVAR	3	RQEFLASVAR3	10155.6	8290.25	7808.96
Q62796	Q62796	RBP1_RAT	Ralbp1	RalA-binding protein 1	1	RQEFLLNCLHR	RQEFLLNC(UniMod:4)LHR	3	RQEFLLNC(UniMod:4)LHR3	3242.3	4883.85	2469.88
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	RQEGIVEIYEDGTSHYLCLPR	RQEGIVEIYEDGTSHYLC(UniMod:4)LPR	4	RQEGIVEIYEDGTSHYLC(UniMod:4)LPR4	39045.7	29998	28956.8
D3ZI07	O55165;D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	0	RQEIAEQK	RQEIAEQK	2	RQEIAEQK2			11151.1
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	RQEIVAEK	RQEIVAEK	2	RQEIVAEK2	107316	200874	148054
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	RQEIVAEKEK	RQEIVAEKEK	2	RQEIVAEKEK2			7937.84
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	RQEIVAEKEK	RQEIVAEKEK	3	RQEIVAEKEK3			130310
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	RQELDAFLAQALSPK	RQELDAFLAQALSPK	3	RQELDAFLAQALSPK3	64355.3	72678.6	79269.8
Q8CHI9	Q8CHI9	CHSTF_RAT	Chst15	Carbohydrate sulfotransferase 15	1	RQELHMFSVIPNK	RQELHMFSVIPNK	3	RQELHMFSVIPNK3	12565.8	16740.5	7008.26
Q8CHI9	Q8CHI9	CHSTF_RAT	Chst15	Carbohydrate sulfotransferase 15	1	RQELHMFSVIPNK	RQELHMFSVIPNK	4	RQELHMFSVIPNK4	22379.7	17491.7	30393.8
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	RQELVTK	RQELVTK	2	RQELVTK2	137610		128852
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	RQEPPPPPPCR	RQEPPPPPPC(UniMod:4)R	3	RQEPPPPPPC(UniMod:4)R3	110384	17834.7	69413.6
Q6P691	Q6P691	Q6P691_RAT	C2cd2	C2 calcium-dependent domain containing 2	1	RQESDTLLSWILTR	RQESDTLLSWILTR	3	RQESDTLLSWILTR3	1035.54	6667.3	
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	RQESGSSLEPPSGLALEDGAHVLR	RQESGSSLEPPSGLALEDGAHVLR	4	RQESGSSLEPPSGLALEDGAHVLR4	11377.1	8079.82	9831.2
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	RQESGYLIEEIGDVLLAR	RQESGYLIEEIGDVLLAR	3	RQESGYLIEEIGDVLLAR3	9326.03	9108.08	
D3ZTC4	D3ZTC4	D3ZTC4_RAT	Ccdc88b	Coiled-coil domain containing 88B	1	RQETELEGLLVR	RQETELEGLLVR	3	RQETELEGLLVR3	6472.98	3393.76	4168.58
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	RQEVDILELK	RQEVDILELK	3	RQEVDILELK3	6107.57	4469.31	661.582
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	RQEVINELFYTER	RQEVINELFYTER	3	RQEVINELFYTER3	57832.6	85362.3	46356.2
F1M3G7	F1M3G7	AKP13_RAT	Akap13	A-kinase anchor protein 13	1	RQEVIYELMQTELHHIR	RQEVIYELMQTELHHIR	4	RQEVIYELMQTELHHIR4	6632.57	4750.88	4175.26
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	RQEVLDQYQR	RQEVLDQYQR	3	RQEVLDQYQR3	29661	23482.8	25595.5
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	RQEYLDQQLQK	RQEYLDQQLQK	3	RQEYLDQQLQK3	16886.6	14657.9	20624.7
G3V762	G3V762	G3V762_RAT	Gfus	GDP-L-fucose synthase	1	RQFIYSLDLAR	RQFIYSLDLAR	3	RQFIYSLDLAR3	4783.28	1752.79	1344.22
A0A0G2JTB2	A0A0G2JTB2	A0A0G2JTB2_RAT	Gbe1	1,4-alpha-glucan branching enzyme	1	RQFNLTDDDLLR	RQFNLTDDDLLR	3	RQFNLTDDDLLR3	3131.56		4718.62
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	RQFSALVPAFDPR	RQFSALVPAFDPR	3	RQFSALVPAFDPR3	22695.3	11789.7	17208.1
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	RQFSALVPAFDPRPGR	RQFSALVPAFDPRPGR	4	RQFSALVPAFDPRPGR4	6251.77	8274.72	11136.3
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	RQFSITCEVNSVWTSPQDVCIR	RQFSITC(UniMod:4)EVNSVWTSPQDVC(UniMod:4)IR	3	RQFSITC(UniMod:4)EVNSVWTSPQDVC(UniMod:4)IR3	32213	20325.8	38619.7
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	RQFSITCEVNSVWTSPQDVCIRK	RQFSITC(UniMod:4)EVNSVWTSPQDVC(UniMod:4)IRK	4	RQFSITC(UniMod:4)EVNSVWTSPQDVC(UniMod:4)IRK4	16162.3	18011.9	14206.9
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	RQFVQSAK	RQFVQSAK	1	RQFVQSAK1	29306.1	24061.6	
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	RQFVQSAK	RQFVQSAK	2	RQFVQSAK2	235983		216672
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	RQGAQLYVEK	RQGAQLYVEK	3	RQGAQLYVEK3	9506.12	10100.1	9210.34
A0A096MKE2	A0A096MKE2	A0A096MKE2_RAT	Snx12	PX domain-containing protein	1	RQGLEQFINK	RQGLEQFINK	3	RQGLEQFINK3	7348.34		5354.64
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	RQGLLQQPEQAPFTSR	RQGLLQQPEQAPFTSR	3	RQGLLQQPEQAPFTSR3	4620.88	2515.33	4389.03
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	RQGSFSEDVISHK	RQGSFSEDVISHK	3	RQGSFSEDVISHK3	18498.3	24901.3	15141.3
Q9JK66	Q9JK66	PRKN_RAT	Prkn	E3 ubiquitin-protein ligase parkin	1	RQGVPADQLR	RQGVPADQLR	3	RQGVPADQLR3	10669.4	3394.06	6272.61
Q5HZY2	Q5HZY2	SAR1B_RAT	Sar1b	GTP-binding protein SAR1b	1	RQGYGEGFR	RQGYGEGFR	2	RQGYGEGFR2	6426.28	11286.7	10038.9
Q62762	Q62762	KC1G2_RAT	Csnk1g2	Casein kinase I isoform gamma-2	1	RQHSIHIIDFGLAK	RQHSIHIIDFGLAK	4	RQHSIHIIDFGLAK4	7462.78	12532.3	7406.7
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	RQIANELNSSCR	RQIANELNSSC(UniMod:4)R	3	RQIANELNSSC(UniMod:4)R3	13008.2	14486.9	16625.4
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	RQIENTLK	RQIENTLK	2	RQIENTLK2	8058.87	22421.8	10746.4
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	RQIGWFPANYVK	RQIGWFPANYVK	3	RQIGWFPANYVK3	17006.2	21587	13441.1
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	RQIHVDVEAK	RQIHVDVEAK	3	RQIHVDVEAK3	93453.2	85547.8	49498.6
A0A0G2JUG8	A0A0G2JUG8	A0A0G2JUG8_RAT	Ccdc191	Coiled-coil domain containing 191	1	RQILAER	RQILAER	2	RQILAER2		32390.5	
D3ZMI6	D3ZMI6	D3ZMI6_RAT	Olfm4	Olfactomedin 4	1	RQILALK	RQILALK	2	RQILALK2	31582.6	39336.1	37218.9
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	RQISEDVDGPDNHESPENWEIVR	RQISEDVDGPDNHESPENWEIVR	3	RQISEDVDGPDNHESPENWEIVR3	2345.32		
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	RQISEDVDGPDNHESPENWEIVR	RQISEDVDGPDNHESPENWEIVR	4	RQISEDVDGPDNHESPENWEIVR4	4068.77	3507.77	6511.83
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	RQITQNTDYR	RQITQNTDYR	3	RQITQNTDYR3		4410.45	
Q5XIN4	Q5XIN4	Q5XIN4_RAT	Mtmr9	Myotubularin related protein 9	1	RQLAELETEDGLRESP	RQLAELETEDGLRESP	3	RQLAELETEDGLRESP3	2192.4	4716.23	4436.97
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	RQLAGGPCVGGLPSYATFPR	RQLAGGPC(UniMod:4)VGGLPSYATFPR	3	RQLAGGPC(UniMod:4)VGGLPSYATFPR3	12380	21496.3	16644.2
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	RQLANYNFDFR	RQLANYNFDFR	3	RQLANYNFDFR3	71892.8	79087.6	70641.4
P16446	P16446	PIPNA_RAT	Pitpna	Phosphatidylinositol transfer protein alpha isoform	1	RQLDEMR	RQLDEMR	2	RQLDEMR2			5347.9
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	RQLEEAEEEAQR	RQLEEAEEEAQR	2	RQLEEAEEEAQR2	105833	119283	84531.5
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	RQLEEAEEEAQR	RQLEEAEEEAQR	3	RQLEEAEEEAQR3	9.57931e+06	1.09443e+07	1.10153e+07
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	RQLEESVDSLGEELVQLR	RQLEESVDSLGEELVQLR	3	RQLEESVDSLGEELVQLR3	47008.5	48423.1	52071.6
D4A7H9	D4A7H9	D4A7H9_RAT	Chmp7	Charged multivesicular body protein 7	1	RQLEPTL	RQLEPTL	2	RQLEPTL2	12594.8	22238.3	16356.9
Q08326	A0A8I6GKW6;Q08326	MSS4_RAT	Rabif	Guanine nucleotide exchange factor MSS4	0	RQLFLPSMR	RQLFLPSMR	3	RQLFLPSMR3	16513.2	21543	15419.7
P58751	P58751	RELN_RAT	Reln	Reelin	1	RQLITSFLDSSQSR	RQLITSFLDSSQSR	3	RQLITSFLDSSQSR3	35018	40917.5	39616.8
A0A0G2K490	A0A0G2K490;A0A8I5ZLV4	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	0	RQLLAER	RQLLAER	2	RQLLAER2	24844.3		19636.3
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	RQLLEEFAWLER	RQLLEEFAWLER	3	RQLLEEFAWLER3	15305.2	16777.4	12815.1
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	RQLLNCLHVITMYNR	RQLLNC(UniMod:4)LHVITMYNR	3	RQLLNC(UniMod:4)LHVITMYNR3	5936.43	7059.83	
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	RQLLNCLHVITMYNR	RQLLNC(UniMod:4)LHVITMYNR	4	RQLLNC(UniMod:4)LHVITMYNR4	5702.95		
Q5RJR2	Q5RJR2;A0A8I6GGS8	TWF1_RAT	Twf1	Twinfilin-1	0	RQLNYVQLEIDIK	RQLNYVQLEIDIK	3	RQLNYVQLEIDIK3	13988	8084.86	4497.15
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	RQLPLTPAPTNEER	RQLPLTPAPTNEER	3	RQLPLTPAPTNEER3	85240.5	94499.8	73450.1
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	RQLQDPEHVASFEK	RQLQDPEHVASFEK	4	RQLQDPEHVASFEK4		5134.49	5371.94
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	RQLQESLAHLSSVEEELAEAR	RQLQESLAHLSSVEEELAEAR	4	RQLQESLAHLSSVEEELAEAR4	8848.56	7640.49	9429.54
O88994	O88994	MARC2_RAT	Mtarc2	Mitochondrial amidoxime reducing component 2	1	RQLQQVGTVSK	RQLQQVGTVSK	3	RQLQQVGTVSK3	59336.8	53811.6	42448.9
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	RQLTPYIQR	RQLTPYIQR	2	RQLTPYIQR2	136946	151505	139317
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	RQLTPYIQR	RQLTPYIQR	3	RQLTPYIQR3	2.75253e+06	3.59499e+06	3.54733e+06
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	RQLTSFIEK	RQLTSFIEK	2	RQLTSFIEK2	276465	187648	171575
M0RAD5	M0RAD5	M0RAD5_RAT	Clpp	ATP-dependent Clp protease proteolytic subunit	1	RQLYNIYAK	RQLYNIYAK	2	RQLYNIYAK2	10554.3	4940.09	7350.04
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	RQNAVLQAAQDDLGHLR	RQNAVLQAAQDDLGHLR	3	RQNAVLQAAQDDLGHLR3	10709.8	11370.6	9461.92
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	RQNAVLQAAQDDLGHLR	RQNAVLQAAQDDLGHLR	4	RQNAVLQAAQDDLGHLR4	7839.99		
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	RQNGEEGYVPTTYIDVTLEK	RQNGEEGYVPTTYIDVTLEK	3	RQNGEEGYVPTTYIDVTLEK3	51364.3	71454.8	61279.8
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	RQNGMEDESHEYRPR	RQNGMEDESHEYRPR	4	RQNGMEDESHEYRPR4	5070.38	13961.7	6930.33
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	RQNGTDDESYGYRPR	RQNGTDDESYGYRPR	4	RQNGTDDESYGYRPR4	2274.56	3315.45	2380.74
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	RQNVAYEYLCHLEEAK	RQNVAYEYLC(UniMod:4)HLEEAK	3	RQNVAYEYLC(UniMod:4)HLEEAK3	2149.01		
A0A0G2QC33	A0A0G2QC33	ATG4B_RAT	Atg4b	Cysteine protease ATG4B	1	RQPDSYFSVLNAFLDR	RQPDSYFSVLNAFLDR	3	RQPDSYFSVLNAFLDR3	13922.4	24598.5	20447.5
A0A0G2QC33	A0A0G2QC33	ATG4B_RAT	Atg4b	Cysteine protease ATG4B	1	RQPDSYFSVLNAFLDRK	RQPDSYFSVLNAFLDRK	3	RQPDSYFSVLNAFLDRK3	8427.5	12249.4	4787.45
A0A0G2QC33	A0A0G2QC33	ATG4B_RAT	Atg4b	Cysteine protease ATG4B	1	RQPDSYFSVLNAFLDRK	RQPDSYFSVLNAFLDRK	4	RQPDSYFSVLNAFLDRK4	11405.7	11581.6	8829.42
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	RQPEEDEEELAR	RQPEEDEEELAR	3	RQPEEDEEELAR3	22419	24020.6	34618.5
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	RQPEHLER	RQPEHLER	2	RQPEHLER2			3970.94
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	RQPILDAIEAK	RQPILDAIEAK	2	RQPILDAIEAK2	20288.7	15887.1	21529.6
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	RQPILDAIEAK	RQPILDAIEAK	3	RQPILDAIEAK3	72652.9	87036.9	83263.7
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	RQPILDAMDAK	RQPILDAMDAK	2	RQPILDAMDAK2	16734.6	12951.4	20672.9
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	RQPILDAMDAK	RQPILDAMDAK	3	RQPILDAMDAK3	52226.1	53543.7	66707.4
F1LVL6	F1LVL6	F1LVL6_RAT	Crtc3	CREB regulated transcription coactivator 3	1	RQPPVSPLTLSPGPEAHQGFNR	RQPPVSPLTLSPGPEAHQGFNR	4	RQPPVSPLTLSPGPEAHQGFNR4	3084.09	7587.63	
B0BN19	B0BN19	B0BN19_RAT	Rab22a	RAB22A, member RAS oncogene family	1	RQPSEPK	RQPSEPK	2	RQPSEPK2	2146.64	4634.21	
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	RQPVFISQVVTEK	RQPVFISQVVTEK	3	RQPVFISQVVTEK3	100559	133834	99042.2
Q5U2M6	Q5U2M6	DCAF8_RAT	Dcaf8	DDB1- and CUL4-associated factor 8	1	RQPVLDFESGHK	RQPVLDFESGHK	3	RQPVLDFESGHK3	9081.54	6896.02	7912.14
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	RQQEEAAAQLK	RQQEEAAAQLK	3	RQQEEAAAQLK3		10728.5	
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	RQQEQLVPTLEK	RQQEQLVPTLEK	3	RQQEQLVPTLEK3	12243.3	15028.3	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	RQQHEQLTEAAQGILTGPGDVSPSASQVHK	RQQHEQLTEAAQGILTGPGDVSPSASQVHK	4	RQQHEQLTEAAQGILTGPGDVSPSASQVHK4	5789.68	10732.6	10335.2
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	RQQLEDMVVDSLQWDDHREETEELMR	RQQLEDMVVDSLQWDDHREETEELMR	4	RQQLEDMVVDSLQWDDHREETEELMR4	32034.6	27815.4	23660.7
Q91XJ1	Q91XJ1	BECN1_RAT	Becn1	Beclin-1	1	RQQLELDDELK	RQQLELDDELK	3	RQQLELDDELK3	7729.12	8696.19	4011.27
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	RQQLEQQQR	RQQLEQQQR	3	RQQLEQQQR3			16727.3
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	RQQLLQEQQLR	RQQLLQEQQLR	3	RQQLLQEQQLR3	7695.29	10003.8	10565.9
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	RQQQLTAMK	RQQQLTAMK	2	RQQQLTAMK2	1.16423e+06	1.52335e+06	1.4108e+06
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	RQQVLDR	RQQVLDR	2	RQQVLDR2	48283.2	57220.8	55942.6
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	RQSGQTDPLQK	RQSGQTDPLQK	2	RQSGQTDPLQK2		9572.49	7011.29
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	RQSNTFPFFSDGLAR	RQSNTFPFFSDGLAR	3	RQSNTFPFFSDGLAR3		10934.3	3046.01
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	RQSQLVDTLQQR	RQSQLVDTLQQR	3	RQSQLVDTLQQR3	26235.7	27092.6	24994.8
O08773	O08773	RGS14_RAT	Rgs14	Regulator of G-protein signaling 14	1	RQTCDIEGLVELLNR	RQTC(UniMod:4)DIEGLVELLNR	3	RQTC(UniMod:4)DIEGLVELLNR3	11051.4	6432.79	14686.8
A0A8I5ZPY8	A0A8I6APG8;A0A8I5ZPY8;F1M7T1	A0A8I5ZPY8_RAT	Ndufb4	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4	0	RQTHIEDPALIR	RQTHIEDPALIR	3	RQTHIEDPALIR3	56457.6	46963.1	44609.8
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	RQTLDQLSEIGQDVGQLLSNPK	RQTLDQLSEIGQDVGQLLSNPK	3	RQTLDQLSEIGQDVGQLLSNPK3	44193	43586.2	36974.4
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	RQTLVSDFPPPAGR	RQTLVSDFPPPAGR	3	RQTLVSDFPPPAGR3	14520.5	6175.72	14074.2
F7EUW3	F7EUW3	F7EUW3_RAT	C2cd2l	C2CD2-like	1	RQVCPLTPGPGK	RQVC(UniMod:4)PLTPGPGK	3	RQVC(UniMod:4)PLTPGPGK3	18950	23720	27498
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	RQVLCYELFQSK	RQVLC(UniMod:4)YELFQSK	3	RQVLC(UniMod:4)YELFQSK3	5653.7	9521.59	5771.74
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	RQVLLSAAEAAEVILR	RQVLLSAAEAAEVILR	3	RQVLLSAAEAAEVILR3	23429.5	23691.2	27077.3
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	RQVLLYDPQVNSPK	RQVLLYDPQVNSPK	3	RQVLLYDPQVNSPK3	7152.06	9621.57	7506.71
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	RQVLNASSVEQSFVGLK	RQVLNASSVEQSFVGLK	3	RQVLNASSVEQSFVGLK3	14781.2	12552.7	6726.75
D3ZED8	D3ZED8	D3ZED8_RAT	Pmel	Premelanosome protein	1	RQVPLDCVLYR	RQVPLDC(UniMod:4)VLYR	3	RQVPLDC(UniMod:4)VLYR3	1874.87	4349.62	2232.71
Q9WVB1	Q9WVB1	RAB6A_RAT	Rab6a	Ras-related protein Rab-6A	1	RQVSIEEGER	RQVSIEEGER	2	RQVSIEEGER2	19622.5	28320.6	28376.4
Q9WVB1	Q9WVB1	RAB6A_RAT	Rab6a	Ras-related protein Rab-6A	1	RQVSIEEGER	RQVSIEEGER	3	RQVSIEEGER3	255014	242965	139797
Q9WVB1	Q9WVB1	RAB6A_RAT	Rab6a	Ras-related protein Rab-6A	1	RQVSIEEGERK	RQVSIEEGERK	3	RQVSIEEGERK3	101740		39043.1
P63322	P63322	RALA_RAT	Rala	Ras-related protein Ral-A	1	RQVSVEEAK	RQVSVEEAK	2	RQVSVEEAK2	4824.68		
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	RQVVELQNR	RQVVELQNR	3	RQVVELQNR3	31659.2	32026.8	38845.5
A0A8I6A6S4	A0A8I6A6S4	A0A8I6A6S4_RAT	Stim2	Stromal interaction molecule 2	1	RQYAEQELEQVR	RQYAEQELEQVR	3	RQYAEQELEQVR3		6775.83	5020.24
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	RQYDQEIENLEK	RQYDQEIENLEK	3	RQYDQEIENLEK3	30865	32748	32742.6
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	RQYLLLHALR	RQYLLLHALR	3	RQYLLLHALR3	6018.41	4013.21	5805.21
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	RQYLLLHSLK	RQYLLLHSLK	3	RQYLLLHSLK3		2924.09	2707.81
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	RQYLQASTSLHYTK	RQYLQASTSLHYTK	3	RQYLQASTSLHYTK3	63307.7	114613	87598
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	RQYLQASTSLHYTK	RQYLQASTSLHYTK	4	RQYLQASTSLHYTK4	9831.73	43027.6	30786.4
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	RRAPSVANVGSHCDLSLK	RRAPSVANVGSHC(UniMod:4)DLSLK	4	RRAPSVANVGSHC(UniMod:4)DLSLK4	3752.21	7983.9	4233.63
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	RRDPWELDLDIK	RRDPWELDLDIK	2	RRDPWELDLDIK2	135905	104798	108331
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	RRDPWELDLDIK	RRDPWELDLDIK	3	RRDPWELDLDIK3	6.9554e+06	6.26908e+06	6.77052e+06
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	RRDPWELDLDIK	RRDPWELDLDIK	4	RRDPWELDLDIK4	1.30947e+06	1.12635e+06	1.16589e+06
A0A0G2JZS1	Q56R16;A0A0G2JZS1	A0A0G2JZS1_RAT	Kpna6	Importin subunit alpha	0	RREEEGIQLR	RREEEGIQLR	3	RREEEGIQLR3	11924.2	18077.6	28450.9
P83953	P83953	IMA5_RAT	Kpna1	Importin subunit alpha-5	1	RREEEGLQLR	RREEEGLQLR	3	RREEEGLQLR3			4889.07
D3ZAQ6	D3ZAQ6	D3ZAQ6_RAT	Nol7	Nucleolar protein 7	1	RREELFIEQK	RREELFIEQK	3	RREELFIEQK3	22821.9		
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	RREPIPSLEAIYLLSPTEK	RREPIPSLEAIYLLSPTEK	3	RREPIPSLEAIYLLSPTEK3	7924.19	11252.1	7000.58
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	RREPIPSLEAIYLLSPTEK	RREPIPSLEAIYLLSPTEK	4	RREPIPSLEAIYLLSPTEK4	175625	184646	189652
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	RREPLPSLEAVYLITPSEK	RREPLPSLEAVYLITPSEK	4	RREPLPSLEAVYLITPSEK4	16464.9	12891.7	11957.8
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	RRGEFFELIR	RRGEFFELIR	3	RRGEFFELIR3	10980.9	15355.5	12083
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	RRGETESEEFEK	RRGETESEEFEK	2	RRGETESEEFEK2	12283.8	6448.34	1619
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	RRGETESEEFEK	RRGETESEEFEK	3	RRGETESEEFEK3	167356	178460	167835
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	RRLEAELEAVSR	RRLEAELEAVSR	3	RRLEAELEAVSR3	6944.02	9438.33	9557.07
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	RRLEEDDMFSVLPEDR	RRLEEDDMFSVLPEDR	3	RRLEEDDMFSVLPEDR3	7471.7	17036.5	12170.5
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	RRLEEDDMFSVLPEDR	RRLEEDDMFSVLPEDR	4	RRLEEDDMFSVLPEDR4	16369.7	21332.4	19631.9
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	RRLEEESAQLK	RRLEEESAQLK	3	RRLEEESAQLK3	31087.6	50392.4	56430.6
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	RRLTQYDIVIK	RRLTQYDIVIK	3	RRLTQYDIVIK3	38683.9	48035.4	43333.2
Q62740	Q62740	SPP24_RAT	Spp2	Secreted phosphoprotein 24	1	RRNDYLLGFLYDEPK	RRNDYLLGFLYDEPK	3	RRNDYLLGFLYDEPK3	95906.7	114958	78037.6
Q62740	Q62740	SPP24_RAT	Spp2	Secreted phosphoprotein 24	1	RRNDYLLGFLYDEPK	RRNDYLLGFLYDEPK	4	RRNDYLLGFLYDEPK4	120171	199272	135093
M0RCA3	M0RCA3	M0RCA3_RAT	Zfpl1	Zinc finger protein-like 1	1	RRPALGWLAQLLR	RRPALGWLAQLLR	3	RRPALGWLAQLLR3	4481.88		
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	RRPATFHLHIYPQLPSAGSQTSCR	RRPATFHLHIYPQLPSAGSQTSC(UniMod:4)R	4	RRPATFHLHIYPQLPSAGSQTSC(UniMod:4)R4	18964.2	27270	8443.77
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	RRPDTLHLWQER	RRPDTLHLWQER	4	RRPDTLHLWQER4	97037	86490.9	90760.2
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	RRPELIPEDLHR	RRPELIPEDLHR	3	RRPELIPEDLHR3	5217.7	8363.81	2022.4
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	RRPELIPEDLHR	RRPELIPEDLHR	4	RRPELIPEDLHR4	126226	179588	98719.6
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	RRPGDAAELQLCQEGIK	RRPGDAAELQLC(UniMod:4)QEGIK	4	RRPGDAAELQLC(UniMod:4)QEGIK4	31227.8	33364.8	27514.9
Q5XIM0	Q5XIM0	Q5XIM0_RAT	Bcs1l	Mitochondrial chaperone BCS1	1	RRPLDSVVLQQGLADR	RRPLDSVVLQQGLADR	4	RRPLDSVVLQQGLADR4	3566.4	3516.5	4224.38
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	RRPPDYIPK	RRPPDYIPK	3	RRPPDYIPK3	28906.3	41877.4	40143.4
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	RRPPSPEPSAK	RRPPSPEPSAK	3	RRPPSPEPSAK3			31997.5
Q80Z30	Q80Z30	PPM1E_RAT	Ppm1e	Protein phosphatase 1E	1	RRPQIYYETSIHAIK	RRPQIYYETSIHAIK	4	RRPQIYYETSIHAIK4	47485.5	45305.5	53585.1
D3Z921	D3Z921	D3Z921_RAT	Tal1	TAL bHLH transcription factor 1, erythroid differentiation factor	1	RRPSPYEMEITDGPHTK	RRPSPYEMEITDGPHTK	4	RRPSPYEMEITDGPHTK4	5611.35	12231.3	3327.74
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	RRPVMSNHTATHILNFALR	RRPVMSNHTATHILNFALR	4	RRPVMSNHTATHILNFALR4	6631.32	11863.9	2016.25
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	RRPVSVSPSSSQEISENQYAVICSEK	RRPVSVSPSSSQEISENQYAVIC(UniMod:4)SEK	4	RRPVSVSPSSSQEISENQYAVIC(UniMod:4)SEK4	47587	42160.8	46410.6
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	RRQEELNNQLFLYDTHQNLR	RRQEELNNQLFLYDTHQNLR	4	RRQEELNNQLFLYDTHQNLR4	11305.6	9126.8	10595.3
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	RRQESGYLIEEIGDVLLAR	RRQESGYLIEEIGDVLLAR	4	RRQESGYLIEEIGDVLLAR4	1611.58	4633.76	1746.48
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	RRQPEEDEEELAR	RRQPEEDEEELAR	3	RRQPEEDEEELAR3	12949.6	8003.21	8239.18
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	RRQPEEDEEELAR	RRQPEEDEEELAR	4	RRQPEEDEEELAR4	26839	20112.6	32024.7
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	RRSDEDEQHLHVK	RRSDEDEQHLHVK	2	RRSDEDEQHLHVK2			8712.39
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	RRSDEDEQHLHVK	RRSDEDEQHLHVK	4	RRSDEDEQHLHVK4			224692
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	RSADTFR	RSADTFR	2	RSADTFR2	7645.23		
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	RSAGVDDQENWHEGK	RSAGVDDQENWHEGK	3	RSAGVDDQENWHEGK3	1993.1	2047.4	
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	RSAGVDDQENWHEGKENIR	RSAGVDDQENWHEGKENIR	4	RSAGVDDQENWHEGKENIR4	9542.32	3382.26	4326.16
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	RSAICIQSWWR	RSAIC(UniMod:4)IQSWWR	3	RSAIC(UniMod:4)IQSWWR3	9259.7	14907.6	7515.12
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	RSALELFFIDQSNYFLNFPHK	RSALELFFIDQSNYFLNFPHK	4	RSALELFFIDQSNYFLNFPHK4	10570.8	9505.09	4128.17
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	RSALYYVDLSGGK	RSALYYVDLSGGK	3	RSALYYVDLSGGK3	3661.9	3663.85	4628.8
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	RSCLPPACFTPPSTAPPDPVLPPLPAK	RSC(UniMod:4)LPPAC(UniMod:4)FTPPSTAPPDPVLPPLPAK	3	RSC(UniMod:4)LPPAC(UniMod:4)FTPPSTAPPDPVLPPLPAK3	1014.64	4076.71	2615.95
D3ZXI3	D3ZXI3	D3ZXI3_RAT	Notum	NOTUM, palmitoleoyl-protein carboxylesterase	1	RSDCIDTINCAPTEAIR	RSDC(UniMod:4)IDTINC(UniMod:4)APTEAIR	3	RSDC(UniMod:4)IDTINC(UniMod:4)APTEAIR3	6230.89	6145.64	7302.57
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	RSDEDEQHLHVK	RSDEDEQHLHVK	2	RSDEDEQHLHVK2			4237.19
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	RSDEDEQHLHVK	RSDEDEQHLHVK	3	RSDEDEQHLHVK3	291994		265238
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	RSDEDYLYREELAR	RSDEDYLYREELAR	3	RSDEDYLYREELAR3	7602.72	14178.3	5819.97
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	RSDEDYLYREELAR	RSDEDYLYREELAR	4	RSDEDYLYREELAR4	2355.84	8353.88	6681.77
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	RSDELTFCR	RSDELTFC(UniMod:4)R	3	RSDELTFC(UniMod:4)R3	55385	69633.9	51145.2
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	RSDFDFSDPK	RSDFDFSDPK	2	RSDFDFSDPK2	15805.2	17573.4	17810.7
P30121	P30121	TIMP2_RAT	Timp2	Metalloproteinase inhibitor 2	1	RSDGSCAWYR	RSDGSC(UniMod:4)AWYR	3	RSDGSC(UniMod:4)AWYR3	10823	21565.6	16184.9
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	RSDLVEEFWMK	RSDLVEEFWMK	3	RSDLVEEFWMK3	17633.2	2993.54	6072.71
Q6AYA6	Q6AYA6	CYBC1_RAT	Cybc1	Cytochrome b-245 chaperone 1	1	RSDVEAIAK	RSDVEAIAK	2	RSDVEAIAK2	28086.5	19622	35577.6
B5DF91	B5DF91	ELAV1_RAT	Elavl1	ELAV-like protein 1	1	RSEAEEAITSFNGHKPPGSSEPITVK	RSEAEEAITSFNGHKPPGSSEPITVK	4	RSEAEEAITSFNGHKPPGSSEPITVK4	44672.2	6941.96	8576.94
P49651	P49651	P2RY1_RAT	P2ry1	P2Y purinoceptor 1	1	RSEANLQSK	RSEANLQSK	2	RSEANLQSK2			8065.17
P36506	P36506	MP2K2_RAT	Map2k2	Dual specificity mitogen-activated protein kinase kinase 2	1	RSEGEDVDFAGWLCR	RSEGEDVDFAGWLC(UniMod:4)R	3	RSEGEDVDFAGWLC(UniMod:4)R3	6963.06	5435.17	11066.3
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	RSEGLYLFENGQR	RSEGLYLFENGQR	2	RSEGLYLFENGQR2	10164.8	20327.6	12140.7
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	RSEGLYLFENGQR	RSEGLYLFENGQR	3	RSEGLYLFENGQR3	805272	855535	987289
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	RSELEEQQMHLNVGLR	RSELEEQQMHLNVGLR	3	RSELEEQQMHLNVGLR3	26377.3	30717.4	25823.7
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	RSELEEQQMHLNVGLR	RSELEEQQMHLNVGLR	4	RSELEEQQMHLNVGLR4	48975.3	60671.9	46812.9
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	RSELEEQQMHLNVGLRK	RSELEEQQMHLNVGLRK	4	RSELEEQQMHLNVGLRK4	6740.37	18910.9	11770.9
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	RSELFEAFDLFDVQDFGK	RSELFEAFDLFDVQDFGK	3	RSELFEAFDLFDVQDFGK3	13570.7	6259.47	7195.58
Q63945	Q63945;A0A8I6A0A9;Q6QI56	SET_RAT	Set	Protein SET	0	RSELIAK	RSELIAK	2	RSELIAK2	16579	11341.3	
F1LTR1	F1LTR1	WDR26_RAT	Wdr26	WD repeat-containing protein 26	1	RSELPIAELTGHTR	RSELPIAELTGHTR	4	RSELPIAELTGHTR4	6560.16	6032.55	5248.25
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	RSELPLRGDNVFFLQEVK	RSELPLRGDNVFFLQEVK	4	RSELPLRGDNVFFLQEVK4	19089.7	30093.2	27416.1
P09456	P09456	KAP0_RAT	Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit	1	RSENEEFVEVGR	RSENEEFVEVGR	3	RSENEEFVEVGR3	51369.9	55384.3	58249.7
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	RSEQSSMLELLR	RSEQSSMLELLR	3	RSEQSSMLELLR3	9377.25	19428.7	18270.2
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	RSESQASSEDLWK	RSESQASSEDLWK	3	RSESQASSEDLWK3	7851.75	11332.2	6755.66
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	RSEVLESLNK	RSEVLESLNK	2	RSEVLESLNK2	3.40789e+06	2.95743e+06	2.80693e+06
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	RSEVLESLNK	RSEVLESLNK	3	RSEVLESLNK3	5.80035e+06	5.91057e+06	5.97397e+06
D3ZED8	D3ZED8	D3ZED8_RAT	Pmel	Premelanosome protein	1	RSFVYVWK	RSFVYVWK	2	RSFVYVWK2	70933.5	93609.7	90679.8
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	RSGALASPTDPFQSR	RSGALASPTDPFQSR	3	RSGALASPTDPFQSR3	1488.56	7501.43	4715.78
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	RSGEVMQHAWVEGNSSVK	RSGEVMQHAWVEGNSSVK	4	RSGEVMQHAWVEGNSSVK4	2576.46	3534.19	
Q04400	Q04400	ADCY5_RAT	Adcy5	Adenylate cyclase type 5	1	RSGGAVTPQQQQR	RSGGAVTPQQQQR	3	RSGGAVTPQQQQR3			3841.2
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	RSGLTGQYPLSDYAVLTEAR	RSGLTGQYPLSDYAVLTEAR	3	RSGLTGQYPLSDYAVLTEAR3		7240.74	4935.64
P0C5W1	P0C5W1	MAP1S_RAT	Map1s	Microtubule-associated protein 1S	1	RSGPGVVTTKPR	RSGPGVVTTKPR	3	RSGPGVVTTKPR3			10260.6
P62815	P62815	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	1	RSGQVLEVSGSK	RSGQVLEVSGSK	3	RSGQVLEVSGSK3	14757.5	21332.8	10767.9
P15650	P15650	ACADL_RAT	Acadl	Long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	RSGSDWILNGSK	RSGSDWILNGSK	3	RSGSDWILNGSK3	18032.3	19629	19060
A0A8I5Y7I2	A0A8I5Y7I2	A0A8I5Y7I2_RAT	Kctd12	Potassium channel tetramerization domain containing 12	1	RSGYITIGYR	RSGYITIGYR	3	RSGYITIGYR3	9441.3	16805.1	15392.1
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	RSGYTFQLLR	RSGYTFQLLR	2	RSGYTFQLLR2	24535.3	17982.6	32115.3
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	RSGYTFQLLR	RSGYTFQLLR	3	RSGYTFQLLR3	678832	696222	841924
F1LVL2	F1LVL2	F1LVL2_RAT	Icoslg	Inducible T-cell co-stimulator ligand	1	RSHFSLDDLYVYWQIVDEAK	RSHFSLDDLYVYWQIVDEAK	3	RSHFSLDDLYVYWQIVDEAK3	38769.2	39578.7	22296.3
F1LVL2	F1LVL2	F1LVL2_RAT	Icoslg	Inducible T-cell co-stimulator ligand	1	RSHFSLDDLYVYWQIVDEAK	RSHFSLDDLYVYWQIVDEAK	4	RSHFSLDDLYVYWQIVDEAK4	55018.7	81198.7	56691.8
A0A0G2QC40	A0A0G2QC40	A0A0G2QC40_RAT	Mkrn1	RING-type E3 ubiquitin transferase	1	RSHFWELIEER	RSHFWELIEER	3	RSHFWELIEER3	3315.9	2638.35	5852.63
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	RSHILNEVGVHVPQQA	RSHILNEVGVHVPQQA	3	RSHILNEVGVHVPQQA3	24103.1	31686.2	20381.9
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	RSHILNEVGVHVPQQA	RSHILNEVGVHVPQQA	4	RSHILNEVGVHVPQQA4		7890.62	5942.41
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	RSHMLLLYPR	RSHMLLLYPR	3	RSHMLLLYPR3	7041.12	10444.2	9404.39
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	RSIPVSAR	RSIPVSAR	2	RSIPVSAR2	21650.2	36270.5	37472.3
Q5XIF6	Q5XIF6;Q6P9V9	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	RSIQFVDWCPTGFK	RSIQFVDWC(UniMod:4)PTGFK	2	RSIQFVDWC(UniMod:4)PTGFK2	97942	134283	127396
Q5XIF6	Q5XIF6;Q6P9V9	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	RSIQFVDWCPTGFK	RSIQFVDWC(UniMod:4)PTGFK	3	RSIQFVDWC(UniMod:4)PTGFK3	722981	962823	1.02203e+06
P08650	P08650	CO5_RAT	C5	Complement C5	1	RSITHSADGVASFVVNLPSEVTSLK	RSITHSADGVASFVVNLPSEVTSLK	3	RSITHSADGVASFVVNLPSEVTSLK3	71698.6	65573.4	49376.9
P08650	P08650	CO5_RAT	C5	Complement C5	1	RSITHSADGVASFVVNLPSEVTSLK	RSITHSADGVASFVVNLPSEVTSLK	4	RSITHSADGVASFVVNLPSEVTSLK4	45424.9	26774.2	32531.2
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	RSLAESGLSWFSESEEK	RSLAESGLSWFSESEEK	3	RSLAESGLSWFSESEEK3	2223.99	2547.93	
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	RSLEGGGCPVR	RSLEGGGC(UniMod:4)PVR	3	RSLEGGGC(UniMod:4)PVR3	46497.6	73768	62370.8
B3GNI6	B3GNI6	SEP11_RAT	Septin11	Septin-11	1	RSLFNYHDTR	RSLFNYHDTR	3	RSLFNYHDTR3	4681.28	10422.6	5717.29
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	RSLFSLK	RSLFSLK	2	RSLFSLK2	13570	10862	19941.4
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	RSLGEIPIVESEIK	RSLGEIPIVESEIK	3	RSLGEIPIVESEIK3	31482.1	45617.9	38756
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	RSLGVGYAAVDNPIFYKPNTAMLLGDAK	RSLGVGYAAVDNPIFYKPNTAMLLGDAK	4	RSLGVGYAAVDNPIFYKPNTAMLLGDAK4	4843.29	2009.79	2450.03
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	RSLHDALCVIR	RSLHDALC(UniMod:4)VIR	3	RSLHDALC(UniMod:4)VIR3	52259.4	47848	78842
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	RSLHQDPVVR	RSLHQDPVVR	2	RSLHQDPVVR2	6617.28		
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	RSLHQDPVVR	RSLHQDPVVR	3	RSLHQDPVVR3	74905.8	57201.6	48546.6
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	RSLMPYFLLTQAVR	RSLMPYFLLTQAVR	3	RSLMPYFLLTQAVR3	18098.6	23705.5	30345.2
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	RSLPEGVVDGIEIYSTK	RSLPEGVVDGIEIYSTK	2	RSLPEGVVDGIEIYSTK2	1544.76		4719.87
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	RSLPEGVVDGIEIYSTK	RSLPEGVVDGIEIYSTK	3	RSLPEGVVDGIEIYSTK3	64050.3	93643.5	101676
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	RSLPTCLPVCGLPK	RSLPTC(UniMod:4)LPVC(UniMod:4)GLPK	2	RSLPTC(UniMod:4)LPVC(UniMod:4)GLPK2	29132.8	31362.5	27021.7
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	RSLPTCLPVCGLPK	RSLPTC(UniMod:4)LPVC(UniMod:4)GLPK	3	RSLPTC(UniMod:4)LPVC(UniMod:4)GLPK3	528596	596017	621864
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	RSLQLSGK	RSLQLSGK	2	RSLQLSGK2	5397.09		
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	RSLTESLESILSR	RSLTESLESILSR	3	RSLTESLESILSR3	6185.73	3062.43	1484.41
Q6VBQ5	Q6VBQ5	MYADM_RAT	Myadm	Myeloid-associated differentiation marker	1	RSMDPSCSR	RSMDPSC(UniMod:4)SR	2	RSMDPSC(UniMod:4)SR2			19220.6
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	RSMGLTLAESELTK	RSMGLTLAESELTK	3	RSMGLTLAESELTK3	7115.72	8575.48	9697.43
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	RSNAINIGLTTLPPVHVIK	RSNAINIGLTTLPPVHVIK	3	RSNAINIGLTTLPPVHVIK3	63898.8	63770.9	61138.9
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	RSNAINIGLTTLPPVHVIK	RSNAINIGLTTLPPVHVIK	4	RSNAINIGLTTLPPVHVIK4	138338	116483	113509
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	RSNEFDYPSVGQLAHK	RSNEFDYPSVGQLAHK	3	RSNEFDYPSVGQLAHK3	10779.5	10603.8	13285
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	RSNEFDYPSVGQLAHK	RSNEFDYPSVGQLAHK	4	RSNEFDYPSVGQLAHK4	22416.1	24732.1	
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	RSNIWLAAVTK	RSNIWLAAVTK	3	RSNIWLAAVTK3	9842.48	9049.3	8613.83
D3ZUL5	D3ZUL5	D3ZUL5_RAT	Myct1	Myc target 1	1	RSNLSLASLTFQR	RSNLSLASLTFQR	3	RSNLSLASLTFQR3	39333.9	46845.1	32683.3
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	RSNLVPVQVCEMLSKPR	RSNLVPVQVC(UniMod:4)EMLSKPR	3	RSNLVPVQVC(UniMod:4)EMLSKPR3	4228.68	6892.55	7512.06
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	RSNLVPVQVCEMLSKPR	RSNLVPVQVC(UniMod:4)EMLSKPR	4	RSNLVPVQVC(UniMod:4)EMLSKPR4	27738.4	28497.1	43756.4
B2RZ97	B2RZ97	B2RZ97_RAT	Kcmf1	E3 ubiquitin-protein ligase KCMF1	1	RSNMHFTSSSTGGLSSSQSSYSPSSR	RSNMHFTSSSTGGLSSSQSSYSPSSR	4	RSNMHFTSSSTGGLSSSQSSYSPSSR4	3844.51	7799.41	
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	RSNPYVK	RSNPYVK	2	RSNPYVK2	10824		13249.6
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	RSNVNFVTEIFR	RSNVNFVTEIFR	3	RSNVNFVTEIFR3	5746.75	6687.51	14042.5
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	RSNYNLEGISVK	RSNYNLEGISVK	3	RSNYNLEGISVK3	3215.71	5599.05	4029.79
D4A9G5	D4A9G5	D4A9G5_RAT	Dpy19l3	Dpy-19 like C-mannosyltransferase 3	1	RSPEEVHALLR	RSPEEVHALLR	3	RSPEEVHALLR3	4750.56	2246.89	5955.81
D3ZTW9	D3ZTW9	D3ZTW9_RAT	Exog	Exo/endonuclease G	1	RSPESTEPLALGAFVVPNK	RSPESTEPLALGAFVVPNK	3	RSPESTEPLALGAFVVPNK3		5215.46	5929.88
B2RYD7	B2RYD7	B2RYD7_RAT	Stt3b	dolichyl-diphosphooligosaccharide--protein glycotransferase	1	RSPGNLYDK	RSPGNLYDK	2	RSPGNLYDK2	1869.19	3368.35	
Q9QZR8	Q9QZR8	PDZD2_RAT	Pdzd2	PDZ domain-containing protein 2	1	RSPHAIVVTQVK	RSPHAIVVTQVK	3	RSPHAIVVTQVK3	2275.17	6268.21	5681.84
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	RSPHYQTLER	RSPHYQTLER	3	RSPHYQTLER3	14273.4	18518	17229.4
P14270	P14270	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	1	RSPMCNQPSINK	RSPMC(UniMod:4)NQPSINK	3	RSPMC(UniMod:4)NQPSINK3	40497.3	39271.8	32228.9
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	RSPPIPLAK	RSPPIPLAK	2	RSPPIPLAK2	315375	309186	275358
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	RSPTENVNTPVGK	RSPTENVNTPVGK	3	RSPTENVNTPVGK3	15445.3	11274.2	16507.5
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	RSPVGEFLLAGGR	RSPVGEFLLAGGR	3	RSPVGEFLLAGGR3	7241.59	12424.3	11354
Q9JIA3	Q9JIA3	IKBB_RAT	Nfkbib	NF-kappa-B inhibitor beta	1	RSQNQPPPSPAAKPLPDDPNPA	RSQNQPPPSPAAKPLPDDPNPA	3	RSQNQPPPSPAAKPLPDDPNPA3	6277.02	7924.94	13403.4
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	RSQPVSAIATTAMGSPK	RSQPVSAIATTAMGSPK	2	RSQPVSAIATTAMGSPK2		3169.48	
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	RSQPVSAIATTAMGSPK	RSQPVSAIATTAMGSPK	3	RSQPVSAIATTAMGSPK3	104977	118181	97118.9
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	RSSDGSLSHEDLAK	RSSDGSLSHEDLAK	3	RSSDGSLSHEDLAK3	15800.8	7929.69	16674.9
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	RSSFFIK	RSSFFIK	2	RSSFFIK2	26120.9	28569.4	22193.6
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	RSSGLTAVWVAR	RSSGLTAVWVAR	3	RSSGLTAVWVAR3	87990.3	18742.8	65885.5
G3V7P2	G3V7P2	G3V7P2_RAT	Fgl2	Fibrinogen-like 2	1	RSSGTYR	RSSGTYR	2	RSSGTYR2			21556.9
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	RSSIWQFFSR	RSSIWQFFSR	3	RSSIWQFFSR3	7890.01	11585.7	9486.29
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	RSSLLTEK	RSSLLTEK	2	RSSLLTEK2	4119.06	4719.31	5123.26
P63144	P63144;P62483	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	0	RSSLVITTK	RSSLVITTK	2	RSSLVITTK2	3704.7	4395.71	3581.23
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	RSSNLDEQQELVERDEEK	RSSNLDEQQELVERDEEK	3	RSSNLDEQQELVERDEEK3	5426.47		
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	RSSNLDEQQELVERDEEK	RSSNLDEQQELVERDEEK	4	RSSNLDEQQELVERDEEK4	18539.3	17870.6	23509.6
P07808	P07808	NPY_RAT	Npy	Pro-neuropeptide Y	1	RSSPETLISDLLMR	RSSPETLISDLLMR	3	RSSPETLISDLLMR3	51731.3	44105.5	43983.1
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	RSSSGTPTSIKPVDNLVSGFSLK	RSSSGTPTSIKPVDNLVSGFSLK	3	RSSSGTPTSIKPVDNLVSGFSLK3	21440.3	21640.7	16313.7
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	RSSSGTPTSIKPVDNLVSGFSLK	RSSSGTPTSIKPVDNLVSGFSLK	4	RSSSGTPTSIKPVDNLVSGFSLK4	56139	64708.5	67214.2
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	RSSTLSQLPGDK	RSSTLSQLPGDK	2	RSSTLSQLPGDK2	2255.28	1926.87	
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	RSSTLSQLPGDK	RSSTLSQLPGDK	3	RSSTLSQLPGDK3	7769.21	10921.7	13070.7
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	RSSVNGEAGPVPPPR	RSSVNGEAGPVPPPR	3	RSSVNGEAGPVPPPR3	5579.67	7969.98	10003.4
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	RSTENCQEGQEAIVVK	RSTENC(UniMod:4)QEGQEAIVVK	3	RSTENC(UniMod:4)QEGQEAIVVK3	1207.47		1910.16
A0A8I6A3F2	A0A8I6A3F2	A0A8I6A3F2_RAT	AABR07034730.2	Ig-like domain-containing protein	1	RSTGNIGSNYVNWYQQHEGR	RSTGNIGSNYVNWYQQHEGR	3	RSTGNIGSNYVNWYQQHEGR3	8622.46	12319	8513.54
A0A8I6A3F2	A0A8I6A3F2	A0A8I6A3F2_RAT	AABR07034730.2	Ig-like domain-containing protein	1	RSTGNIGSNYVNWYQQHEGR	RSTGNIGSNYVNWYQQHEGR	4	RSTGNIGSNYVNWYQQHEGR4	58869.6	69522.6	54114.7
F7EUW3	F7EUW3	F7EUW3_RAT	C2cd2l	C2CD2-like	1	RSTLIISGVSK	RSTLIISGVSK	3	RSTLIISGVSK3	10478	11266.6	12721.1
A0A8I5ZMG6	A0A8I5ZMG6	A0A8I5ZMG6_RAT	Ppp2r5e	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	RSTLNELVDYITISR	RSTLNELVDYITISR	3	RSTLNELVDYITISR3	1317.51	5876.35	3838.12
Q561Q9	Q561Q9	Q561Q9_RAT	Ctsw	Cathepsin W	1	RSTPYWILK	RSTPYWILK	2	RSTPYWILK2	14620.3	8865.49	17873.1
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	RSTQGVTLTDLK	RSTQGVTLTDLK	3	RSTQGVTLTDLK3	11697.6	11847.2	21053.5
Q10728	A0A8I6A6B6;Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	0	RSTQGVTLTDLQEAEK	RSTQGVTLTDLQEAEK	3	RSTQGVTLTDLQEAEK3	27900.5	35176	37264.2
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	RSTSLPSR	RSTSLPSR	2	RSTSLPSR2	15795		12531
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	RSTTENFFLK	RSTTENFFLK	2	RSTTENFFLK2	25633.4	37201.4	21319.9
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	RSTTENFFLK	RSTTENFFLK	3	RSTTENFFLK3	8679.28	11921.3	10237.6
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	RSTTQVADSAYQR	RSTTQVADSAYQR	3	RSTTQVADSAYQR3	7318.05	7456.73	3692.06
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	RSTTQVHPVQK	RSTTQVHPVQK	2	RSTTQVHPVQK2			85818.6
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	RSTTQVHPVQK	RSTTQVHPVQK	3	RSTTQVHPVQK3			192352
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	RSTVAQLVK	RSTVAQLVK	2	RSTVAQLVK2	332109	418070	410543
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	RSTYNHLSSWLTDAR	RSTYNHLSSWLTDAR	3	RSTYNHLSSWLTDAR3	31355.1	38493.1	35359.6
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	RSTYNHLSSWLTDAR	RSTYNHLSSWLTDAR	4	RSTYNHLSSWLTDAR4	13501	14325.9	15870.7
P70541	P70541	EI2BG_RAT	Eif2b3	Translation initiation factor eIF-2B subunit gamma	1	RSVIGSSCVIR	RSVIGSSC(UniMod:4)VIR	3	RSVIGSSC(UniMod:4)VIR3	8499.91	5686.01	5652.11
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	RSVMDATQIAGLNCLR	RSVMDATQIAGLNC(UniMod:4)LR	3	RSVMDATQIAGLNC(UniMod:4)LR3	6364.64	10939.7	10157.6
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	RSVSDNDIR	RSVSDNDIR	2	RSVSDNDIR2	137625	121450	118024
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	RSVSDNDIRK	RSVSDNDIRK	2	RSVSDNDIRK2			14825.2
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	RSVSDNDIRK	RSVSDNDIRK	3	RSVSDNDIRK3			24636.5
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	RSYFPVPIGK	RSYFPVPIGK	3	RSYFPVPIGK3	75257.2	57053.8	54144.5
O35217	O35217	MINP1_RAT	Minpp1	Multiple inositol polyphosphate phosphatase 1	1	RSYGYAINSR	RSYGYAINSR	3	RSYGYAINSR3	5562.12	2255.43	4445.46
Q0Z843	Q0Z843	Q0Z843_RAT	Fig4	FIG4 phosphoinositide 5-phosphatase	1	RSYTHWWTPEVVK	RSYTHWWTPEVVK	3	RSYTHWWTPEVVK3	2344.15	3730.46	
F1LT49	F1LT49	F1LT49_RAT	Lrrc47	Leucine rich repeat containing 47	1	RTAATIATHDLQAVR	RTAATIATHDLQAVR	3	RTAATIATHDLQAVR3	7584.54		
P04550	P04550	PTMS_RAT	Ptms	Parathymosin	1	RTAEEEDEADPK	RTAEEEDEADPK	2	RTAEEEDEADPK2			17539
P04550	P04550	PTMS_RAT	Ptms	Parathymosin	1	RTAEEEDEADPK	RTAEEEDEADPK	3	RTAEEEDEADPK3			92427.9
P04550	P04550	PTMS_RAT	Ptms	Parathymosin	1	RTAEEEDEADPKR	RTAEEEDEADPKR	2	RTAEEEDEADPKR2			25419.6
P04550	P04550	PTMS_RAT	Ptms	Parathymosin	1	RTAEEEDEADPKR	RTAEEEDEADPKR	3	RTAEEEDEADPKR3			37545.6
P04550	P04550	PTMS_RAT	Ptms	Parathymosin	1	RTAEEEDEADPKR	RTAEEEDEADPKR	4	RTAEEEDEADPKR4			10091.4
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	RTAEHEAAQQDLQSK	RTAEHEAAQQDLQSK	3	RTAEHEAAQQDLQSK3			2753.73
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	RTALVANTSNMPVAAR	RTALVANTSNMPVAAR	3	RTALVANTSNMPVAAR3	13915.9	5486.38	10800.5
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	RTANDAVELHIK	RTANDAVELHIK	3	RTANDAVELHIK3	5949.34	3604.32	
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	RTCSCHEDYVLQPDEVSCKPK	RTC(UniMod:4)SC(UniMod:4)HEDYVLQPDEVSC(UniMod:4)KPK	3	RTC(UniMod:4)SC(UniMod:4)HEDYVLQPDEVSC(UniMod:4)KPK3	149384	151451	176096
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	RTCSCHEDYVLQPDEVSCKPK	RTC(UniMod:4)SC(UniMod:4)HEDYVLQPDEVSC(UniMod:4)KPK	4	RTC(UniMod:4)SC(UniMod:4)HEDYVLQPDEVSC(UniMod:4)KPK4	1.93477e+06	2.31524e+06	2.20124e+06
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	RTDCVDSCPHPIR	RTDC(UniMod:4)VDSC(UniMod:4)PHPIR	3	RTDC(UniMod:4)VDSC(UniMod:4)PHPIR3	51515.1	65730.9	48933.3
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	RTDCVDSCPHPIR	RTDC(UniMod:4)VDSC(UniMod:4)PHPIR	4	RTDC(UniMod:4)VDSC(UniMod:4)PHPIR4	244734	270599	232867
Q6PEC4	Q6PEC4	SKP1_RAT	Skp1	S-phase kinase-associated protein 1	1	RTDDIPVWDQEFLK	RTDDIPVWDQEFLK	2	RTDDIPVWDQEFLK2	22093.4	23209.6	17748.7
Q6PEC4	Q6PEC4	SKP1_RAT	Skp1	S-phase kinase-associated protein 1	1	RTDDIPVWDQEFLK	RTDDIPVWDQEFLK	3	RTDDIPVWDQEFLK3	188138	200465	233803
A0A8I6ABM0	A0A8I6ABM0	A0A8I6ABM0_RAT	Rit1	Ras-like without CAAX 1	1	RTDDTPVVLVGNK	RTDDTPVVLVGNK	3	RTDDTPVVLVGNK3			5115.01
P05942	P05942	S10A4_RAT	S100a4	Protein S100-A4	1	RTDEAAFQK	RTDEAAFQK	2	RTDEAAFQK2		639475	
D3Z9L0	D3Z9L0	D3Z9L0_RAT	Agk	Acylglycerol kinase, mitochondrial	1	RTDEATFSK	RTDEATFSK	2	RTDEATFSK2	5695.17	4545.39	
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	RTDFVDR	RTDFVDR	2	RTDFVDR2	7797.57	10543.3	9815.51
Q9Z2Z8	Q9Z2Z8	DHCR7_RAT	Dhcr7	7-dehydrocholesterol reductase	1	RTDGHCLIWGK	RTDGHC(UniMod:4)LIWGK	3	RTDGHC(UniMod:4)LIWGK3	3611.89	11632.4	8054.54
A0JN30	A0JN30	A0JN30_RAT	Cnpy2	Canopy FGF signaling regulator 2	1	RTDLCDHALHR	RTDLC(UniMod:4)DHALHR	3	RTDLC(UniMod:4)DHALHR3	10348	8049.65	13014.7
A4V8B4	A4V8B4	SAV1_RAT	Sav1	Protein salvador homolog 1	1	RTDLCLPESSASAFSASGDGVVSR	RTDLC(UniMod:4)LPESSASAFSASGDGVVSR	3	RTDLC(UniMod:4)LPESSASAFSASGDGVVSR3	21963.2	23277.5	21483.2
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	RTDMNPFLAPR	RTDMNPFLAPR	3	RTDMNPFLAPR3	11083.7	12414	11277.7
Q66H12	Q66H12	NAGAB_RAT	Naga	Alpha-N-acetylgalactosaminidase	1	RTDMPYHFHCSLLELNYPK	RTDMPYHFHC(UniMod:4)SLLELNYPK	4	RTDMPYHFHC(UniMod:4)SLLELNYPK4	13624.7		10892.3
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	RTEALCK	RTEALC(UniMod:4)K	2	RTEALC(UniMod:4)K2			6250.07
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	RTEAYLPDDKNK	RTEAYLPDDKNK	3	RTEAYLPDDKNK3	24386.4	32373.4	18011.9
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	RTEDDSLVVWK	RTEDDSLVVWK	3	RTEDDSLVVWK3	14604.6	20407.4	26399.4
P49806	P49806	RGS10_RAT	Rgs10	Regulator of G-protein signaling 10	1	RTEEEEEDPPDAQTAAK	RTEEEEEDPPDAQTAAK	3	RTEEEEEDPPDAQTAAK3	75742.1	61894.3	52715.2
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	RTEFYFAQAR	RTEFYFAQAR	3	RTEFYFAQAR3	5639.16	8038.38	9780.45
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	RTEGSDGAVSLSSADAQDSLEK	RTEGSDGAVSLSSADAQDSLEK	3	RTEGSDGAVSLSSADAQDSLEK3	2712.86	2881.42	
Q9QZR6	Q9QZR6	SEPT9_RAT	Septin9	Septin-9	1	RTEITIVKPQESGLR	RTEITIVKPQESGLR	3	RTEITIVKPQESGLR3	1913.25		1553.92
Q9QZR6	Q9QZR6	SEPT9_RAT	Septin9	Septin-9	1	RTEITIVKPQESGLR	RTEITIVKPQESGLR	4	RTEITIVKPQESGLR4	3842.07	4062.45	4835.59
P62919	P62919;D4A6W6	RL8_RAT	Rpl8	Large ribosomal subunit protein uL2	0	RTELFIAAEGIHTGQFVYCGK	RTELFIAAEGIHTGQFVYC(UniMod:4)GK	4	RTELFIAAEGIHTGQFVYC(UniMod:4)GK4	4685.56	5115.51	3170.47
Q62931	Q62931	GOSR1_RAT	Gosr1	Golgi SNAP receptor complex member 1	1	RTELFLK	RTELFLK	2	RTELFLK2	20044.9	24151.1	26051.3
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	RTEPVLESSLQR	RTEPVLESSLQR	3	RTEPVLESSLQR3	9018.28	15077	13673.1
Q6AYT7	Q6AYT7	ABD12_RAT	Abhd12	Lysophosphatidylserine lipase ABHD12	1	RTEPVTLEHER	RTEPVTLEHER	3	RTEPVTLEHER3	14303.4	8597.94	9321.96
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	RTESVPSDINNPVDR	RTESVPSDINNPVDR	3	RTESVPSDINNPVDR3	18422.4	14841.5	20635.5
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	RTEVPPLLLILDR	RTEVPPLLLILDR	3	RTEVPPLLLILDR3	4513.84	3911.95	7075.05
A0A096MJ11	A0A096MJ11	A0A096MJ11_RAT	Gsdmd	Gasdermin D	1	RTFELPSSGHK	RTFELPSSGHK	3	RTFELPSSGHK3	32076.6	30688.2	26166
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	RTFSVYSSSR	RTFSVYSSSR	3	RTFSVYSSSR3	8575.92	10182.9	5573.25
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	RTFVAGDGK	RTFVAGDGK	2	RTFVAGDGK2	44081	29540.6	30214.3
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	RTFVLSAAQPSPTAHPIGSK	RTFVLSAAQPSPTAHPIGSK	3	RTFVLSAAQPSPTAHPIGSK3	23336.9	25684.7	18265.5
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	RTFVLSAAQPSPTAHPIGSK	RTFVLSAAQPSPTAHPIGSK	4	RTFVLSAAQPSPTAHPIGSK4	44903.6	60858.8	64372.6
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	RTGAIVDVPVGDELLGR	RTGAIVDVPVGDELLGR	2	RTGAIVDVPVGDELLGR2	23221.5	27432.8	21398.2
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	RTGAIVDVPVGDELLGR	RTGAIVDVPVGDELLGR	3	RTGAIVDVPVGDELLGR3	1.26881e+06	1.28807e+06	1.31703e+06
A0A8I6GL39	A0A8I6GL39	A0A8I6GL39_RAT	Scamp2	Secretory carrier-associated membrane protein	1	RTGASFQQAQEEFSQGIFSSR	RTGASFQQAQEEFSQGIFSSR	3	RTGASFQQAQEEFSQGIFSSR3	10021.8	18100.2	25919.8
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	RTGETGVEETILEGHLGVTK	RTGETGVEETILEGHLGVTK	3	RTGETGVEETILEGHLGVTK3	24671.8	33555	34291.2
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	RTGETGVEETILEGHLGVTK	RTGETGVEETILEGHLGVTK	4	RTGETGVEETILEGHLGVTK4	10085.2	8423.13	6082.5
Q63663	Q63663	GBP2_RAT	Gbp2	Guanylate-binding protein 2	1	RTGFSLGSTVQSHTK	RTGFSLGSTVQSHTK	3	RTGFSLGSTVQSHTK3	4424.94	3637.56	3873.42
A0A8J8YNR6	A0A8J8YNR6	A0A8J8YNR6_RAT	Fxr2	FMR1 autosomal homolog 2	1	RTGGPAYGPSSDPSTASETESEK	RTGGPAYGPSSDPSTASETESEK	3	RTGGPAYGPSSDPSTASETESEK3	2423.83		
Q5U4F3	Q5U4F3	F107B_RAT	Fam107b	Protein FAM107B	1	RTGQEVAQAQES	RTGQEVAQAQES	2	RTGQEVAQAQES2	7993.27		7892.68
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	RTGSNISGASSDISLDEQYK	RTGSNISGASSDISLDEQYK	3	RTGSNISGASSDISLDEQYK3	2747.63	2940.31	5574.11
Q9QXU2	Q9QXU2	SURF1_RAT	Surf1	Surfeit locus protein 1	1	RTGTDPIFIDADFNSTTPGGPIGGQTR	RTGTDPIFIDADFNSTTPGGPIGGQTR	3	RTGTDPIFIDADFNSTTPGGPIGGQTR3	3985.01	5075.58	4117.65
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	RTGTVQVLK	RTGTVQVLK	2	RTGTVQVLK2	7527.73	7406.66	7594.23
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	RTGYESGDYEMLGEGLGVK	RTGYESGDYEMLGEGLGVK	3	RTGYESGDYEMLGEGLGVK3	117934	121725	111310
Q5XIA1	Q5XIA1	NCLN_RAT	Ncln	BOS complex subunit NCLN	1	RTHAAYNLLFFASGGGK	RTHAAYNLLFFASGGGK	3	RTHAAYNLLFFASGGGK3	4903.3	1243.12	722.887
Q5XIA1	Q5XIA1	NCLN_RAT	Ncln	BOS complex subunit NCLN	1	RTHAAYNLLFFASGGGK	RTHAAYNLLFFASGGGK	4	RTHAAYNLLFFASGGGK4	4606.17	3232.16	6376.7
P09330	P09330;A0A0G2JSV3;M0RBK1;P60892	PRPS2_RAT	Prps2	Ribose-phosphate pyrophosphokinase 2	0	RTHNGESVSYLFSHVPL	RTHNGESVSYLFSHVPL	4	RTHNGESVSYLFSHVPL4	6221.99	4069.39	4611.91
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	RTIAPCQK	RTIAPC(UniMod:4)QK	2	RTIAPC(UniMod:4)QK2			10051.9
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	RTIAQIIDR	RTIAQIIDR	2	RTIAQIIDR2		5402.96	2539.75
B5DEZ3	B5DEZ3	B5DEZ3_RAT	Ccdc126	Coiled-coil domain containing 126	1	RTIAVLLDDILQR	RTIAVLLDDILQR	3	RTIAVLLDDILQR3	9174.03	4840.54	7382.77
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	RTIEGLR	RTIEGLR	2	RTIEGLR2	4655.33	11718.2	12699.9
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	RTIPWLEDR	RTIPWLEDR	3	RTIPWLEDR3	25319.5	41041.6	38368.9
Q9Z1P2	A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	RTIPWLENR	RTIPWLENR	3	RTIPWLENR3	143608	255004	140380
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	RTIPWLENRVPENTMQAMQQK	RTIPWLENRVPENTMQAMQQK	4	RTIPWLENRVPENTMQAMQQK4	2703.89	7556.6	10069.7
Q6AY56	P68370;Q68FR8;Q6AYZ1;Q6AY56	TBA8_RAT	Tuba8	Tubulin alpha-8 chain	0	RTIQFVDWCPTGFK	RTIQFVDWC(UniMod:4)PTGFK	2	RTIQFVDWC(UniMod:4)PTGFK2	92334	106207	101442
Q6AY56	P68370;Q68FR8;Q6AYZ1;Q6AY56	TBA8_RAT	Tuba8	Tubulin alpha-8 chain	0	RTIQFVDWCPTGFK	RTIQFVDWC(UniMod:4)PTGFK	3	RTIQFVDWC(UniMod:4)PTGFK3	2.21195e+06	2.86016e+06	3.04603e+06
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	RTLEGELHDLR	RTLEGELHDLR	3	RTLEGELHDLR3	58246.2	28052.5	10732.4
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	RTLFQTK	RTLFQTK	2	RTLFQTK2	4404.83		8784.16
P85515	F7F067;P85515	ACTZ_RAT	Actr1a	Alpha-centractin	0	RTLFSNIVLSGGSTLFK	RTLFSNIVLSGGSTLFK	3	RTLFSNIVLSGGSTLFK3	8540.15	4536.41	4495.44
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	RTLGLFQHHDAITGTAK	RTLGLFQHHDAITGTAK	4	RTLGLFQHHDAITGTAK4	3991.45	2234.29	
A0A8I6ADA8	A0A8I6ADA8	A0A8I6ADA8_RAT	Abhd4	Abhydrolase domain containing 4, N-acyl phospholipase B	1	RTLHTFDLLGFGR	RTLHTFDLLGFGR	3	RTLHTFDLLGFGR3	3365.1	4145.2	1606.7
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	RTLLFTFNVPGSGNTYPK	RTLLFTFNVPGSGNTYPK	3	RTLLFTFNVPGSGNTYPK3	11650.5	10677.4	21627.2
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	RTLLGLPPLPEDSIK	RTLLGLPPLPEDSIK	3	RTLLGLPPLPEDSIK3	16577.5	28909.4	23979.2
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	RTLLLSLLATEIER	RTLLLSLLATEIER	3	RTLLLSLLATEIER3	1355.78		1446.73
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	RTLNPEFNER	RTLNPEFNER	2	RTLNPEFNER2	2938.59		1652.38
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	RTLNPEFNER	RTLNPEFNER	3	RTLNPEFNER3	130307	146005	157672
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	RTLPVLLLYSIK	RTLPVLLLYSIK	3	RTLPVLLLYSIK3	1826.52	7291.53	2612.99
Q5EB73	Q5EB73	PGAP4_RAT	Pgap4	Post-GPI attachment to proteins factor 4	1	RTLTYLSQVYCHK	RTLTYLSQVYC(UniMod:4)HK	3	RTLTYLSQVYC(UniMod:4)HK3	5155.26	2048.1	3480.35
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	RTMVEDLVVLVR	RTMVEDLVVLVR	3	RTMVEDLVVLVR3	25987.6	24629.1	27429.7
Q6IMF3	Q6IMF3	K2C1_RAT	Krt1	Keratin, type II cytoskeletal 1	1	RTNAENEFVTIK	RTNAENEFVTIK	2	RTNAENEFVTIK2	54492.7	45902.5	42535.4
Q6IMF3	Q6IMF3	K2C1_RAT	Krt1	Keratin, type II cytoskeletal 1	1	RTNAENEFVTIK	RTNAENEFVTIK	3	RTNAENEFVTIK3	788421	920555	603791
Q6IMF3	Q6IMF3	K2C1_RAT	Krt1	Keratin, type II cytoskeletal 1	1	RTNAENEFVTIKK	RTNAENEFVTIKK	3	RTNAENEFVTIKK3	61687.3	40410	69457.6
Q6IMF3	Q6IMF3	K2C1_RAT	Krt1	Keratin, type II cytoskeletal 1	1	RTNAENEFVTIKK	RTNAENEFVTIKK	4	RTNAENEFVTIKK4	26887.1	31733.8	33921
D4A0T0	D4A0T0	D4A0T0_RAT	Ndufb10	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10	1	RTPAPSPQTSIPNPITYLTK	RTPAPSPQTSIPNPITYLTK	3	RTPAPSPQTSIPNPITYLTK3	18528.5	39473.9	33333.1
Q5FVG1	Q5FVG1	GP157_RAT	Gpr157	G-protein coupled receptor 157	1	RTPEVPST	RTPEVPST	2	RTPEVPST2	26149	31446.6	27801.2
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	RTPFGAYGGLLK	RTPFGAYGGLLK	3	RTPFGAYGGLLK3	44567.8	54893.6	60802.7
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	RTPIHAAATNGHSECLR	RTPIHAAATNGHSEC(UniMod:4)LR	4	RTPIHAAATNGHSEC(UniMod:4)LR4	6452.51		
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	RTPITVVR	RTPITVVR	2	RTPITVVR2	142910	134687	83853.6
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	RTPLLTR	RTPLLTR	2	RTPLLTR2	4289.41		
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	RTPLQHEAPLWMDQLCTGCMK	RTPLQHEAPLWMDQLC(UniMod:4)TGC(UniMod:4)MK	4	RTPLQHEAPLWMDQLC(UniMod:4)TGC(UniMod:4)MK4	11730.1	8842.18	11529.2
D3ZAI6	D3ZAI6	D3ZAI6_RAT	Nt5dc3	5'-nucleotidase domain containing 3	1	RTPLQHELPAWSDSPSAFK	RTPLQHELPAWSDSPSAFK	3	RTPLQHELPAWSDSPSAFK3	3552.67	10278.8	6147.21
D3ZAI6	D3ZAI6	D3ZAI6_RAT	Nt5dc3	5'-nucleotidase domain containing 3	1	RTPLQHELPAWSDSPSAFK	RTPLQHELPAWSDSPSAFK	4	RTPLQHELPAWSDSPSAFK4	3428.13	8663.03	14394.2
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	RTPMFYNYTYAPEDTEVLRPYSNVSNLK	RTPMFYNYTYAPEDTEVLRPYSNVSNLK	4	RTPMFYNYTYAPEDTEVLRPYSNVSNLK4	5531.62	6597.11	1121.21
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	RTPNGVVLAPVQLGK	RTPNGVVLAPVQLGK	3	RTPNGVVLAPVQLGK3	17360.4	27426.7	17764.2
Q8R431	Q8R431	MGLL_RAT	Mgll	Monoglyceride lipase	1	RTPQNVPYQDLPHLVNADGQYLFCR	RTPQNVPYQDLPHLVNADGQYLFC(UniMod:4)R	4	RTPQNVPYQDLPHLVNADGQYLFC(UniMod:4)R4	11257.5	12367.7	10463.1
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	RTPSSAQYLEEK	RTPSSAQYLEEK	2	RTPSSAQYLEEK2	1879.64	2895.44	
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	RTPSSAQYLEEK	RTPSSAQYLEEK	3	RTPSSAQYLEEK3	17564.9	25259.6	28144.9
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	RTPSSGMSSTMK	RTPSSGMSSTMK	3	RTPSSGMSSTMK3	10494	20784	15453.6
O88959	O88959	INHBE_RAT	Inhbe	Inhibin beta E chain	1	RTPTCESETPLCCR	RTPTC(UniMod:4)ESETPLC(UniMod:4)C(UniMod:4)R	3	RTPTC(UniMod:4)ESETPLC(UniMod:4)C(UniMod:4)R3	6624.99	6734.52	11692
P51111	P51111	HD_RAT	Htt	Huntingtin	1	RTPVILISEVVR	RTPVILISEVVR	3	RTPVILISEVVR3	26663.3	26243.9	21564.4
Q6P6S9	Q6P6S9	ENTP5_RAT	Entpd5	Ectonucleoside triphosphate diphosphohydrolase 5	1	RTPVVLK	RTPVVLK	2	RTPVVLK2	45502.3	47481.5	35315.4
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	RTQDPNTIFR	RTQDPNTIFR	2	RTQDPNTIFR2	32903	34497.4	27115.2
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	RTQDPNTIFR	RTQDPNTIFR	3	RTQDPNTIFR3	284318	323854	292608
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	RTQLGLVMDGFNSLLR	RTQLGLVMDGFNSLLR	3	RTQLGLVMDGFNSLLR3	42579.7	32770.7	33333.5
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	RTQNMALALQLK	RTQNMALALQLK	3	RTQNMALALQLK3	5043.04	2853.74	4359.27
Q68FS3	Q68FS3	FBX7_RAT	Fbxo7	F-box only protein 7	1	RTQPLEVPESEPTLGQLR	RTQPLEVPESEPTLGQLR	3	RTQPLEVPESEPTLGQLR3	13981.5	20894.5	16716.8
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	RTQTAATVEQCNVHLPVSR	RTQTAATVEQC(UniMod:4)NVHLPVSR	3	RTQTAATVEQC(UniMod:4)NVHLPVSR3	8375.86	6650.03	5926.24
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	RTQTAATVEQCNVHLPVSR	RTQTAATVEQC(UniMod:4)NVHLPVSR	4	RTQTAATVEQC(UniMod:4)NVHLPVSR4	30587.2	42919.8	47660.5
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	RTQVPEVFLSK	RTQVPEVFLSK	2	RTQVPEVFLSK2	50899.1	32711.8	21946.1
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	RTQVPEVFLSK	RTQVPEVFLSK	3	RTQVPEVFLSK3	1.48647e+06	1.00582e+06	630922
Q5FWU0	Q5FWU0	Q5FWU0_RAT	Wasf2	Wiskott-Aldrich syndrome protein family member	1	RTSMVSPSHPPPAPPLSSPPGPK	RTSMVSPSHPPPAPPLSSPPGPK	3	RTSMVSPSHPPPAPPLSSPPGPK3	19409.6	15283.1	12190.7
Q5FWU0	Q5FWU0	Q5FWU0_RAT	Wasf2	Wiskott-Aldrich syndrome protein family member	1	RTSMVSPSHPPPAPPLSSPPGPK	RTSMVSPSHPPPAPPLSSPPGPK	4	RTSMVSPSHPPPAPPLSSPPGPK4	143643	167513	153996
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	RTSPSEGALANDESTEVMGDGESAHDSPR	RTSPSEGALANDESTEVMGDGESAHDSPR	4	RTSPSEGALANDESTEVMGDGESAHDSPR4	825.208	5912.59	2477.22
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	RTSSAQVEGGVHGLHSYEK	RTSSAQVEGGVHGLHSYEK	4	RTSSAQVEGGVHGLHSYEK4	23975.1	11554.9	34080.7
Q3B7T9	Q3B7T9	RFIP1_RAT	Rab11fip1	Rab11 family-interacting protein 1	1	RTSSTDHTQPNQSNFSLPK	RTSSTDHTQPNQSNFSLPK	4	RTSSTDHTQPNQSNFSLPK4		2854.99	
D3ZM19	D3ZM19	D3ZM19_RAT	Evi2b	Ecotropic viral integration site 2B	1	RTSVVSLMPWKPSK	RTSVVSLMPWKPSK	2	RTSVVSLMPWKPSK2	3118.41	3638.45	188.909
D3ZM19	D3ZM19	D3ZM19_RAT	Evi2b	Ecotropic viral integration site 2B	1	RTSVVSLMPWKPSK	RTSVVSLMPWKPSK	3	RTSVVSLMPWKPSK3	158606	183899	167475
D3ZM19	D3ZM19	D3ZM19_RAT	Evi2b	Ecotropic viral integration site 2B	1	RTSVVSLMPWKPSK	RTSVVSLMPWKPSK	4	RTSVVSLMPWKPSK4	150858	154555	177243
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	RTSYEWYIPK	RTSYEWYIPK	2	RTSYEWYIPK2	8697.19	12864.9	13341.6
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	RTSYEWYIPK	RTSYEWYIPK	3	RTSYEWYIPK3	8695.86		
Q6P6Q2	Q6P6Q2	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	1	RTTAENEFVMLK	RTTAENEFVMLK	2	RTTAENEFVMLK2		1863.51	2594.96
Q6P6Q2	Q6P6Q2	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	1	RTTAENEFVMLK	RTTAENEFVMLK	3	RTTAENEFVMLK3	12133.8	3176.19	7149.23
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	RTTALLLPGIIK	RTTALLLPGIIK	2	RTTALLLPGIIK2	6856.13	7731.43	9534.48
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	RTTALLLPGIIK	RTTALLLPGIIK	3	RTTALLLPGIIK3	87896	106797	119636
B5DFN2	B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	1	RTTDVMFGGK	RTTDVMFGGK	2	RTTDVMFGGK2	1447.35		16139.6
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	RTTLEMEFAK	RTTLEMEFAK	2	RTTLEMEFAK2	62159.8	51267.5	73708.3
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	RTTLEMEFAK	RTTLEMEFAK	3	RTTLEMEFAK3	52530.6	60974.5	71865.7
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	RTTPPTAATPVR	RTTPPTAATPVR	3	RTTPPTAATPVR3	37776.3	41582.1	29200.1
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	RTTSNTLHYIHIEQLDK	RTTSNTLHYIHIEQLDK	4	RTTSNTLHYIHIEQLDK4	8806.61	5452.81	3973.15
Q641X8	Q641X8;A0A0G2K273	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	0	RTTVVAQLK	RTTVVAQLK	2	RTTVVAQLK2	20201.9	22354	18233.2
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	RTTWDRPEPLPPGWER	RTTWDRPEPLPPGWER	4	RTTWDRPEPLPPGWER4	7517.15		7795.37
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	RTVALIK	RTVALIK	2	RTVALIK2	16696.4	7727.85	
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	RTVDLQEELVCVQK	RTVDLQEELVC(UniMod:4)VQK	3	RTVDLQEELVC(UniMod:4)VQK3	19397	17113.4	14284.6
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	RTVDLSSHLAK	RTVDLSSHLAK	3	RTVDLSSHLAK3	73120.8	60189.8	56290.6
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	RTVEMHNK	RTVEMHNK	2	RTVEMHNK2			3233.53
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	RTVENIKDPLFR	RTVENIKDPLFR	3	RTVENIKDPLFR3	29770.3	26472.4	29960.7
G3V6P8	G3V6P8	G3V6P8_RAT	Gng12	Guanine nucleotide-binding protein subunit gamma	1	RTVQQLR	RTVQQLR	2	RTVQQLR2	4042.55		6701.53
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	RTVSEIR	RTVSEIR	2	RTVSEIR2	8252.6		9112.48
O08730	O08730	GLYG_RAT	Gyg1	Glycogenin-1	1	RTVVLASPQVSDSMR	RTVVLASPQVSDSMR	3	RTVVLASPQVSDSMR3	11737.8	17580.2	7452.43
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	RTYEEGLK	RTYEEGLK	2	RTYEEGLK2	9096.18	7465.03	10242.9
A0A8I6A5H5	A0A8I6A5H5	A0A8I6A5H5_RAT	Rela	RELA proto-oncogene, NF-kB subunit	1	RTYETFK	RTYETFK	2	RTYETFK2	3687.31	5441.61	4810.73
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	RTYVGAMPGK	RTYVGAMPGK	2	RTYVGAMPGK2	7477.14	4719.09	
Q9WVB1	Q9WVB1	RAB6A_RAT	Rab6a	Ras-related protein Rab-6A	1	RVAAALPGMESTQDR	RVAAALPGMESTQDR	3	RVAAALPGMESTQDR3	199729	218591	246138
E9PU02	E9PU02	E9PU02_RAT	Trappc9	Trafficking protein particle complex subunit 9	1	RVAAMQCVAPSIAEPGWR	RVAAMQC(UniMod:4)VAPSIAEPGWR	3	RVAAMQC(UniMod:4)VAPSIAEPGWR3		2011.66	
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	RVAEAQVFLR	RVAEAQVFLR	3	RVAEAQVFLR3	17285	14001.6	11906.8
P06302	P06302	PTMA_RAT	Ptma	Prothymosin alpha	1	RVAEDDEDDDVETK	RVAEDDEDDDVETK	2	RVAEDDEDDDVETK2	8285.34	4608.25	7011.35
P06302	P06302	PTMA_RAT	Ptma	Prothymosin alpha	1	RVAEDDEDDDVETK	RVAEDDEDDDVETK	3	RVAEDDEDDDVETK3	146990	119598	173624
P06302	P06302	PTMA_RAT	Ptma	Prothymosin alpha	1	RVAEDDEDDDVETKK	RVAEDDEDDDVETKK	3	RVAEDDEDDDVETKK3	1373.84		
A0A8I6AGG9	A0A8I6AGG9	A0A8I6AGG9_RAT	Chchd3	Coiled-coil-helix-coiled-coil-helix domain containing 3	1	RVAEELALEQAK	RVAEELALEQAK	3	RVAEELALEQAK3	20271.8	20933.8	22222.1
Q5PQX0	Q5PQX0	UXS1_RAT	Uxs1	UDP-glucuronic acid decarboxylase 1	1	RVAETMCYAYMK	RVAETMC(UniMod:4)YAYMK	3	RVAETMC(UniMod:4)YAYMK3	5870.67	4978.82	3238.38
B2GV22	B2GV22	PTSS2_RAT	Ptdss2	Phosphatidylserine synthase 2	1	RVAGGSGSESPLLEGR	RVAGGSGSESPLLEGR	3	RVAGGSGSESPLLEGR3	8904.32	15510	6436.08
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	RVAGSVTELIQAAEAMK	RVAGSVTELIQAAEAMK	2	RVAGSVTELIQAAEAMK2	33504.7	36742.4	24777.8
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	RVAGSVTELIQAAEAMK	RVAGSVTELIQAAEAMK	3	RVAGSVTELIQAAEAMK3	1.54673e+06	1.55967e+06	1.65318e+06
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	RVALEEMENKPR	RVALEEMENKPR	3	RVALEEMENKPR3	24483.5	31157.1	24690.3
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	RVALSPAGVQALVK	RVALSPAGVQALVK	3	RVALSPAGVQALVK3	21853.9	23655.2	23634
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	RVALVTFNSAAHNKPSLIR	RVALVTFNSAAHNKPSLIR	4	RVALVTFNSAAHNKPSLIR4	15103.9	15933.7	13212.3
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	RVALYPDLGEPNYILNIK	RVALYPDLGEPNYILNIK	3	RVALYPDLGEPNYILNIK3	861540	1.24481e+06	1.15303e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	RVALYPDLGEPNYILNIK	RVALYPDLGEPNYILNIK	4	RVALYPDLGEPNYILNIK4	3928.9	3584.16	
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	RVALYPDLGEPNYILNIKR	RVALYPDLGEPNYILNIKR	4	RVALYPDLGEPNYILNIKR4	8284.33	4517.26	4038.78
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	RVAMCVLSSPHGR	RVAMC(UniMod:4)VLSSPHGR	3	RVAMC(UniMod:4)VLSSPHGR3	4724.98	9596.7	4251.67
A0A8I5ZYN9	A0A8I5ZYN9	A0A8I5ZYN9_RAT	Ipo11-ps1	Similar to importin 11	1	RVAPHALSEEEK	RVAPHALSEEEK	3	RVAPHALSEEEK3	5425.08	6774.01	10153.3
D3ZE05	D3ZE05	D3ZE05_RAT	Cilp2	Cartilage intermediate layer protein 2	1	RVAVNTLLQDYLAR	RVAVNTLLQDYLAR	3	RVAVNTLLQDYLAR3	4669.76	5236.7	6678.01
P04644	P04644;D3ZKG6;D3ZHU9;D3ZFA8	RS17_RAT	Rps17	Small ribosomal subunit protein eS17	0	RVCEEIAIIPSK	RVC(UniMod:4)EEIAIIPSK	2	RVC(UniMod:4)EEIAIIPSK2	17940.8	7815.52	8722.91
P04644	P04644;D3ZKG6;D3ZHU9;D3ZFA8	RS17_RAT	Rps17	Small ribosomal subunit protein eS17	0	RVCEEIAIIPSK	RVC(UniMod:4)EEIAIIPSK	3	RVC(UniMod:4)EEIAIIPSK3	15116.6	23379.7	20770.1
Q9ESC2	Q9ESC2	TNMD_RAT	Tnmd	Tenomodulin	1	RVCEPLLGYYPYPYCYQGGR	RVC(UniMod:4)EPLLGYYPYPYC(UniMod:4)YQGGR	3	RVC(UniMod:4)EPLLGYYPYPYC(UniMod:4)YQGGR3	3237.92	6385.29	9215
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	RVCTTELSCK	RVC(UniMod:4)TTELSC(UniMod:4)K	2	RVC(UniMod:4)TTELSC(UniMod:4)K2	126651	62329.9	27779
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	RVCTTELSCK	RVC(UniMod:4)TTELSC(UniMod:4)K	3	RVC(UniMod:4)TTELSC(UniMod:4)K3	77491.3	201240	163494
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	RVDDFKK	RVDDFKK	2	RVDDFKK2			16486.1
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	RVDEEQEQQVDMK	RVDEEQEQQVDMK	2	RVDEEQEQQVDMK2	2754.54	1221.31	
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	RVDEEQEQQVDMK	RVDEEQEQQVDMK	3	RVDEEQEQQVDMK3	17621.5	32486.1	28303
O35397	O35397	CASP6_RAT	Casp6	Caspase-6	1	RVDFCKDPGAIGK	RVDFC(UniMod:4)KDPGAIGK	3	RVDFC(UniMod:4)KDPGAIGK3	4704.14	9833.62	4806.7
Q9WTS8	Q9WTS8	FCN1_RAT	Fcn1	Ficolin-1	1	RVDGSINFYR	RVDGSINFYR	2	RVDGSINFYR2	4975.36	4913.11	1208.89
Q9WTS8	Q9WTS8	FCN1_RAT	Fcn1	Ficolin-1	1	RVDGSINFYR	RVDGSINFYR	3	RVDGSINFYR3	79946.6	63841.8	88479.3
A0A8I6GH88	A0A8I6GH88	A0A8I6GH88_RAT	Fkbp2	peptidylprolyl isomerase	1	RVDHCPIK	RVDHC(UniMod:4)PIK	2	RVDHC(UniMod:4)PIK2			3526.76
D3ZGJ0	D3ZGJ0	D3ZGJ0_RAT	Dhx32	DEAH-box helicase 32 (putative)	1	RVDIAGLGR	RVDIAGLGR	2	RVDIAGLGR2		2140.18	
A1L108	A1L108	ARP5L_RAT	Arpc5l	Actin-related protein 2/3 complex subunit 5-like protein	1	RVDIDEFDENK	RVDIDEFDENK	3	RVDIDEFDENK3	30244.7	36078.7	38459.7
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	RVDIEVLPQEVQQALTFALPDPSR	RVDIEVLPQEVQQALTFALPDPSR	3	RVDIEVLPQEVQQALTFALPDPSR3	5268.21		2155.63
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	RVDIGLK	RVDIGLK	2	RVDIGLK2	34377.2	33887.3	35710.5
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	RVDMASNPAKETFITGLDAPR	RVDMASNPAKETFITGLDAPR	3	RVDMASNPAKETFITGLDAPR3	4906.79		1874.91
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	RVDMASNPAKETFITGLDAPR	RVDMASNPAKETFITGLDAPR	4	RVDMASNPAKETFITGLDAPR4	8106.05	7087.89	10514.3
D3ZCK2	D3ZCK2	D3ZCK2_RAT	Nkiras2	NFKB inhibitor interacting Ras-like 2	1	RVDPDVAQHWAK	RVDPDVAQHWAK	3	RVDPDVAQHWAK3	9927.87	5237.54	4983.24
A0A0G2K1P3	A0A0G2K1P3	A0A0G2K1P3_RAT	Bnip2	BCL2 interacting protein 2	1	RVDQELNGK	RVDQELNGK	2	RVDQELNGK2	10606.1	6447.14	
D3ZN06	D3ZN06	D3ZN06_RAT	Cd248	CD248 molecule	1	RVDSLVGVGPANGLLWIGLQR	RVDSLVGVGPANGLLWIGLQR	3	RVDSLVGVGPANGLLWIGLQR3	523275	616629	550908
D3ZN06	D3ZN06	D3ZN06_RAT	Cd248	CD248 molecule	1	RVDSLVGVGPANGLLWIGLQR	RVDSLVGVGPANGLLWIGLQR	4	RVDSLVGVGPANGLLWIGLQR4	6975.36		3920.73
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	RVDSVNPPYPR	RVDSVNPPYPR	2	RVDSVNPPYPR2	3.87329e+06	4.00418e+06	3.3991e+06
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	RVDSVNPPYPR	RVDSVNPPYPR	3	RVDSVNPPYPR3	164608		121637
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	RVDSVNPPYPRSIAQYWLGCPTSEK	RVDSVNPPYPRSIAQYWLGC(UniMod:4)PTSEK	4	RVDSVNPPYPRSIAQYWLGC(UniMod:4)PTSEK4	63513.9	101143	84711.9
Q63691	Q63691	CD14_RAT	Cd14	Monocyte differentiation antigen CD14	1	RVDTEANLGQYTDIIR	RVDTEANLGQYTDIIR	3	RVDTEANLGQYTDIIR3	12962.7	17021.5	11925.7
A0A0G2JZC4	A0A0G2JZC4	A0A0G2JZC4_RAT	Sema6d	Semaphorin 6D	1	RVDVPTTPGVPMTSLER	RVDVPTTPGVPMTSLER	3	RVDVPTTPGVPMTSLER3	4369.27		
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	RVEAAQETVADYQQTIK	RVEAAQETVADYQQTIK	2	RVEAAQETVADYQQTIK2	5837.71	5808.28	2522.23
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	RVEAAQETVADYQQTIK	RVEAAQETVADYQQTIK	3	RVEAAQETVADYQQTIK3	102938	108823	105712
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	RVEAAQETVADYQQTIKK	RVEAAQETVADYQQTIKK	3	RVEAAQETVADYQQTIKK3		7894.65	3942.75
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	RVEAAQETVADYQQTIKK	RVEAAQETVADYQQTIKK	4	RVEAAQETVADYQQTIKK4		4650.53	4987.45
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	RVEASIMK	RVEASIMK	2	RVEASIMK2	8.06172e+06	6.218e+06	6.677e+06
P08649	P08649	CO4_RAT	C4	Complement C4	1	RVEASITK	RVEASITK	2	RVEASITK2	1.60852e+07	1.90345e+07	9667.39
P08649	P08649	CO4_RAT	C4	Complement C4	1	RVEASITKANSFLGQK	RVEASITKANSFLGQK	3	RVEASITKANSFLGQK3	2865.61	7043.55	4262.04
P08649	P08649	CO4_RAT	C4	Complement C4	1	RVEASITKANSFLGQK	RVEASITKANSFLGQK	4	RVEASITKANSFLGQK4	4944.32	6846.99	8306.3
D3ZE59	D3ZE59	D3ZE59_RAT	Tmem115	Transmembrane protein 115	1	RVEDQSAWPSMDDDEEEAGAK	RVEDQSAWPSMDDDEEEAGAK	3	RVEDQSAWPSMDDDEEEAGAK3	54337	48735	56156.4
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	RVEDVLGK	RVEDVLGK	2	RVEDVLGK2	65011.1	116145	79464.6
P52632	P52632	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	1	RVEELLGRPMDSQWIPHAQS	RVEELLGRPMDSQWIPHAQS	3	RVEELLGRPMDSQWIPHAQS3		13104.3	11900.2
P52632	P52632	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	1	RVEELLGRPMDSQWIPHAQS	RVEELLGRPMDSQWIPHAQS	4	RVEELLGRPMDSQWIPHAQS4	12615	8564.42	10146.6
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	RVEEQVNLR	RVEEQVNLR	3	RVEEQVNLR3	51010.3	47252.8	61965.3
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	RVEEQVNLRK	RVEEQVNLRK	3	RVEEQVNLRK3	25083.6	46574	38847.2
G3V8U1	G3V8U1	G3V8U1_RAT	Tmem101	Transmembrane protein 101	1	RVEFWNQMK	RVEFWNQMK	2	RVEFWNQMK2	3794.67	3805.68	9591.49
G3V8U1	G3V8U1	G3V8U1_RAT	Tmem101	Transmembrane protein 101	1	RVEFWNQMK	RVEFWNQMK	3	RVEFWNQMK3	17624	11670.9	13703
A0A8I6GK63	A0A8I6GK63	A0A8I6GK63_RAT	Smc4	Structural maintenance of chromosomes protein	1	RVEILNEHR	RVEILNEHR	3	RVEILNEHR3	25408.9	4860.77	7646.39
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	RVELLQDELALSEPR	RVELLQDELALSEPR	3	RVELLQDELALSEPR3	4425.42	6052.93	7894.42
A1L134	A1L134	AUP1_RAT	Aup1	Lipid droplet-regulating VLDL assembly factor AUP1	1	RVELVESLKK	RVELVESLKK	3	RVELVESLKK3	37456.8	51877.3	61271
P51111	P51111	HD_RAT	Htt	Huntingtin	1	RVEMLLAANLQSSMAQLPEEELNR	RVEMLLAANLQSSMAQLPEEELNR	3	RVEMLLAANLQSSMAQLPEEELNR3	9265.97	19406.8	13680.2
F7ELS2	F7ELS2;A0A8I6GM53	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	0	RVENAYILTCNVSLEYEK	RVENAYILTC(UniMod:4)NVSLEYEK	3	RVENAYILTC(UniMod:4)NVSLEYEK3	18955	27617	12756.4
F1LTT7	F1LTT7	F1LTT7_RAT	Dennd4b	DENN domain containing 4B	1	RVENGAWAYLSPLVLR	RVENGAWAYLSPLVLR	3	RVENGAWAYLSPLVLR3	371.314	3998.04	1755.21
Q920G2	Q920G2	NHRF2_RAT	Nherf2	Na(+)/H(+) exchange regulatory cofactor NHE-RF2	1	RVEPGSPAEAAALR	RVEPGSPAEAAALR	3	RVEPGSPAEAAALR3			4518.73
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	RVEPLRNELQK	RVEPLRNELQK	3	RVEPLRNELQK3	97054.4	118223	115091
D4A7N1	D4A7N1	MIC25_RAT	Chchd6	MICOS complex subunit Mic25	1	RVEPVCSGLQAQILR	RVEPVC(UniMod:4)SGLQAQILR	3	RVEPVC(UniMod:4)SGLQAQILR3	21124.5	23171.6	19537.5
P00507	A0A8I6GJD2;P00507;A0A8I6GJR0	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	0	RVESQLK	RVESQLK	2	RVESQLK2			113902
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	RVETVSQTLR	RVETVSQTLR	3	RVETVSQTLR3	72697.6	83490.4	83349.4
Q5FVQ9	Q5FVQ9	TBCE_RAT	Tbce	Tubulin-specific chaperone E	1	RVEVNGEYATVR	RVEVNGEYATVR	3	RVEVNGEYATVR3	4181.12	4390.16	5054.67
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	RVEVPEDFGVGLEIASYTAR	RVEVPEDFGVGLEIASYTAR	3	RVEVPEDFGVGLEIASYTAR3	208063	207222	158611
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	RVEVPEDFGVGLEIASYTAREPDTFMEQK	RVEVPEDFGVGLEIASYTAREPDTFMEQK	4	RVEVPEDFGVGLEIASYTAREPDTFMEQK4	29805.5	41793.8	15658.2
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	RVFCNFPYAPQLSEALIK	RVFC(UniMod:4)NFPYAPQLSEALIK	3	RVFC(UniMod:4)NFPYAPQLSEALIK3	8272.38	14854.1	10540.5
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	RVFEEIQK	RVFEEIQK	2	RVFEEIQK2	6852.95	10643.1	6925.42
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	RVFIMDNCEELIPEYLNFIR	RVFIMDNC(UniMod:4)EELIPEYLNFIR	3	RVFIMDNC(UniMod:4)EELIPEYLNFIR3	59579.6	79663.5	43452.7
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	RVFIMDSCDELIPEYLNFIR	RVFIMDSC(UniMod:4)DELIPEYLNFIR	3	RVFIMDSC(UniMod:4)DELIPEYLNFIR3	39911.6	47447.9	64686
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	RVFITDDFHDMMPK	RVFITDDFHDMMPK	2	RVFITDDFHDMMPK2	11110.2	9946.18	8127
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	RVFITDDFHDMMPK	RVFITDDFHDMMPK	3	RVFITDDFHDMMPK3	1.00181e+06	1.09205e+06	1.02003e+06
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	RVFITDDFHDMMPK	RVFITDDFHDMMPK	4	RVFITDDFHDMMPK4	242103	268300	270720
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	RVFLEFHQFFLDR	RVFLEFHQFFLDR	3	RVFLEFHQFFLDR3	16649.8	6946.5	13308.7
Q6UPR8	Q6UPR8	ERMP1_RAT	Ermp1	Endoplasmic reticulum metallopeptidase 1	1	RVFLQHVSR	RVFLQHVSR	3	RVFLQHVSR3	25467.8	19101.8	32864.5
Q4FZY0	Q4FZY0	EFHD2_RAT	Efhd2	EF-hand domain-containing protein D2	1	RVFNPYTEFK	RVFNPYTEFK	2	RVFNPYTEFK2	7351.69	2731.93	6948.9
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	RVGDNDFLEVR	RVGDNDFLEVR	3	RVGDNDFLEVR3	113463	120589	117388
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	RVGEGTQVLEMPFK	RVGEGTQVLEMPFK	2	RVGEGTQVLEMPFK2	3701.59	4574.64	2760.33
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	RVGEGTQVLEMPFK	RVGEGTQVLEMPFK	3	RVGEGTQVLEMPFK3	90160.2	69582.9	80373.9
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	RVGFQYEGTYK	RVGFQYEGTYK	3	RVGFQYEGTYK3	28518.2	24019.9	37032.8
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	RVGIITWHPTAR	RVGIITWHPTAR	3	RVGIITWHPTAR3	191025	144651	150518
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	RVGIVAWHPTAR	RVGIVAWHPTAR	3	RVGIVAWHPTAR3	537814	534477	471228
F1M7P8	F1M7P8	F1M7P8_RAT	Spryd3	SPRY domain containing 3	1	RVGSTIMPMSPDGLFPAVGMHSLGEEVR	RVGSTIMPMSPDGLFPAVGMHSLGEEVR	4	RVGSTIMPMSPDGLFPAVGMHSLGEEVR4	7981.25	7621.92	12236
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	RVGTEGLVDSFSQGLER	RVGTEGLVDSFSQGLER	3	RVGTEGLVDSFSQGLER3	14748.6	21224.6	13999
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	RVGTMSYALQAEMNHFHSNR	RVGTMSYALQAEMNHFHSNR	4	RVGTMSYALQAEMNHFHSNR4	17010.9	18496.2	20837.7
F7EYK0	F7EYK0	F7EYK0_RAT	Fkbp5	peptidylprolyl isomerase	1	RVGTSEETPMIGDK	RVGTSEETPMIGDK	3	RVGTSEETPMIGDK3	7170.73	3813.54	
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	RVGYLAASQCFHEGTDVIMLTTNQIR	RVGYLAASQC(UniMod:4)FHEGTDVIMLTTNQIR	4	RVGYLAASQC(UniMod:4)FHEGTDVIMLTTNQIR4	14520	9444.81	7180.87
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	RVHELVVQAR	RVHELVVQAR	3	RVHELVVQAR3	15130.8	18624.3	23540.8
Q9JJM7	Q9JJM7	GP1BB_RAT	Gp1bb	Platelet glycoprotein Ib beta chain	1	RVHLGANPWR	RVHLGANPWR	2	RVHLGANPWR2	12819.6	8813.27	13933.3
Q9JJM7	Q9JJM7	GP1BB_RAT	Gp1bb	Platelet glycoprotein Ib beta chain	1	RVHLGANPWR	RVHLGANPWR	3	RVHLGANPWR3	2.56496e+06	3.3073e+06	3.15304e+06
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	RVHLMNPMVPGLTGSK	RVHLMNPMVPGLTGSK	3	RVHLMNPMVPGLTGSK3	16238.9	8877.86	10605.2
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	RVHLMNPMVPGLTGSK	RVHLMNPMVPGLTGSK	4	RVHLMNPMVPGLTGSK4	4231.72	8186.97	6313.95
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	RVHMTWVQPR	RVHMTWVQPR	3	RVHMTWVQPR3	27690.8	16485.1	18839.2
A0A8I5Y9A0	A0A8I5Y9A0	A0A8I5Y9A0_RAT	Tex264	Testis expressed 264	1	RVHPALDVYIK	RVHPALDVYIK	3	RVHPALDVYIK3	24246.8	21582.4	22731.2
P04642	P04642;A0A8I6ASS6	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	RVHPISTMIK	RVHPISTMIK	2	RVHPISTMIK2	8531.3	5537.35	4172.04
P04642	P04642;A0A8I6ASS6	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	RVHPISTMIK	RVHPISTMIK	3	RVHPISTMIK3	680343	604390	683816
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	RVHVTQEDFEMAVAK	RVHVTQEDFEMAVAK	3	RVHVTQEDFEMAVAK3	19004.5	31979.5	18438.9
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	RVHVTQEDFEMAVAK	RVHVTQEDFEMAVAK	4	RVHVTQEDFEMAVAK4	33287	30621.2	27783.7
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	RVIAVADDFCK	RVIAVADDFC(UniMod:4)K	3	RVIAVADDFC(UniMod:4)K3	13167.2	15777.3	19856.5
Q68FU3	Q68FU3	ETFB_RAT	Etfb	Electron transfer flavoprotein subunit beta	1	RVIDFAVK	RVIDFAVK	2	RVIDFAVK2	20606.7	13902.6	10011.7
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	RVIFVADSLSTLSK	RVIFVADSLSTLSK	3	RVIFVADSLSTLSK3	6810.34	7478.11	4913.37
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	RVIIHPDYR	RVIIHPDYR	3	RVIIHPDYR3	64060.9	70056.1	61411.1
P04797	F1LUV3;M0R660;M0R7H7;D3ZGY4;P04797;A0A8I6AAX6	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	RVIISAPSADAPMFVMGVNHEK	RVIISAPSADAPMFVMGVNHEK	3	RVIISAPSADAPMFVMGVNHEK3	278667	278462	302904
P04797	F1LUV3;M0R660;M0R7H7;D3ZGY4;P04797;A0A8I6AAX6	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	RVIISAPSADAPMFVMGVNHEK	RVIISAPSADAPMFVMGVNHEK	4	RVIISAPSADAPMFVMGVNHEK4	1.15034e+06	1.43645e+06	1.47408e+06
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	RVILLVK	RVILLVK	2	RVILLVK2	52866.8	24124.1	30123.2
Q5PQN2	Q5PQN2	BFAR_RAT	Bfar	Bifunctional apoptosis regulator	1	RVILMELER	RVILMELER	3	RVILMELER3	3691.63	3478.6	2156.01
Q68G38	Q68G38	TOR1A_RAT	Tor1a	Torsin-1A	1	RVILNAVSGFLSNPKPK	RVILNAVSGFLSNPKPK	3	RVILNAVSGFLSNPKPK3	12906.4	21221.1	13888.2
Q68G38	Q68G38	TOR1A_RAT	Tor1a	Torsin-1A	1	RVILNAVSGFLSNPKPK	RVILNAVSGFLSNPKPK	4	RVILNAVSGFLSNPKPK4	11143.5	17821.6	12018
B2RZ37	B2RZ37	REEP5_RAT	Reep5	Receptor expression-enhancing protein 5	1	RVIRPIFLK	RVIRPIFLK	3	RVIRPIFLK3	410488	521006	445791
A0A8I6AAF1	A0A8I6AAF1	A0A8I6AAF1_RAT	Card19	Caspase recruitment domain family, member 19	1	RVLAFSPVIIDR	RVLAFSPVIIDR	3	RVLAFSPVIIDR3	7701.87	13669.8	12952.4
P19945	D3ZJT4;P19945	RLA0_RAT	Rplp0	Large ribosomal subunit protein uL10	0	RVLALSVETDYTFPLAEK	RVLALSVETDYTFPLAEK	3	RVLALSVETDYTFPLAEK3	10498.9	10951.1	8395.81
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	RVLCPINYPESPTR	RVLC(UniMod:4)PINYPESPTR	3	RVLC(UniMod:4)PINYPESPTR3	9682.86	18231.3	12207.8
Q6IFU8	Q6IFV1;Q6IFV3;Q63279;Q6IFW5;Q6IFU7;Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	0	RVLDELTLAR	RVLDELTLAR	3	RVLDELTLAR3	2969.29	4500.65	2599.87
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	RVLDGVK	RVLDGVK	2	RVLDGVK2	92990.6	93233.8	60726.2
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	RVLDSEGQLR	RVLDSEGQLR	2	RVLDSEGQLR2	5899.47	15822.9	13139.6
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	RVLDSEGQLR	RVLDSEGQLR	3	RVLDSEGQLR3	72473.9	46557.2	64459.3
Q5XIN7	Q5XIN7	PMGT1_RAT	Pomgnt1	Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1	1	RVLDVEVYSSR	RVLDVEVYSSR	3	RVLDVEVYSSR3	6998.69	2753.89	6364.41
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	RVLEFIAVSQLR	RVLEFIAVSQLR	3	RVLEFIAVSQLR3	38826.5	38202.6	49113.4
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	RVLFYCHFPDLLLTQR	RVLFYC(UniMod:4)HFPDLLLTQR	4	RVLFYC(UniMod:4)HFPDLLLTQR4	3832.37		5915.97
P25113	P16290;P25113	PGAM1_RAT	Pgam1	Phosphoglycerate mutase 1	0	RVLIAAHGNSLR	RVLIAAHGNSLR	3	RVLIAAHGNSLR3	15806.6	10114.3	26629.1
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	RVLLFSDGNSQGATAEAIEK	RVLLFSDGNSQGATAEAIEK	3	RVLLFSDGNSQGATAEAIEK3	6338.79	10101.8	6466.22
P62282	P62282;A0A8I5Y1A5	RS11_RAT	Rps11	Small ribosomal subunit protein uS17	0	RVLLGETGK	RVLLGETGK	2	RVLLGETGK2	8951.24	9703.89	4339.06
P62282	P62282;A0A8I5Y1A5	RS11_RAT	Rps11	Small ribosomal subunit protein uS17	0	RVLLGETGKEK	RVLLGETGKEK	3	RVLLGETGKEK3	3335.89	5336.05	7599.92
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	RVLLLASR	RVLLLASR	2	RVLLLASR2	116208	114703	120717
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	RVLLQHVHEGYEK	RVLLQHVHEGYEK	4	RVLLQHVHEGYEK4	2078.67	4579.16	4574.7
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	RVLNSESDVVSK	RVLNSESDVVSK	2	RVLNSESDVVSK2	1013.65	1224.52	3582.24
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	RVLNSESDVVSK	RVLNSESDVVSK	3	RVLNSESDVVSK3	14190	17468.7	12244.1
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	RVLTDELK	RVLTDELK	2	RVLTDELK2	19262.2	20949.1	16171.2
Q8VHE9	Q8VHE9	RETST_RAT	Retsat	All-trans-retinol 13,14-reductase	1	RVLVLEQHTK	RVLVLEQHTK	3	RVLVLEQHTK3	19784.1	19586.8	18118.6
Q498S0	Q498S0	Q498S0_RAT	Chst12	Carbohydrate sulfotransferase	1	RVMIVLSESLLDR	RVMIVLSESLLDR	3	RVMIVLSESLLDR3	11783.2	15440.6	11816.4
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	RVMVDANEVPIQK	RVMVDANEVPIQK	2	RVMVDANEVPIQK2	13753.3	13849.8	10524.5
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	RVMVDANEVPIQK	RVMVDANEVPIQK	3	RVMVDANEVPIQK3	66197.1	65316.5	73137
Q6P503	Q6P503	Q6P503_RAT	Atp6v1d	V-type proton ATPase subunit D	1	RVNAIEHVIIPR	RVNAIEHVIIPR	3	RVNAIEHVIIPR3	5250.21	2917.45	10975
Q5XI81	Q5XI81	FXR1_RAT	Fxr1	RNA-binding protein FXR1	1	RVNILSDMHLR	RVNILSDMHLR	3	RVNILSDMHLR3	12492.9	16041.2	24397.6
Q6AXT5	Q6AXT5	RAB21_RAT	Rab21	Ras-related protein Rab-21	1	RVNLAIWDTAGQER	RVNLAIWDTAGQER	2	RVNLAIWDTAGQER2	9830.67	5306.25	6119.53
Q6AXT5	Q6AXT5	RAB21_RAT	Rab21	Ras-related protein Rab-21	1	RVNLAIWDTAGQER	RVNLAIWDTAGQER	3	RVNLAIWDTAGQER3	105694	107046	109215
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	RVNLWLVCSR	RVNLWLVC(UniMod:4)SR	3	RVNLWLVC(UniMod:4)SR3	18339.3	14732.6	11737.2
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	RVNPPTLR	RVNPPTLR	2	RVNPPTLR2	2941.3	4213.92	
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	RVNSLPEVLPILNSNEAK	RVNSLPEVLPILNSNEAK	3	RVNSLPEVLPILNSNEAK3	97381.8	75302.4	106326
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	RVPCGYDTCYDWEK	RVPC(UniMod:4)GYDTC(UniMod:4)YDWEK	2	RVPC(UniMod:4)GYDTC(UniMod:4)YDWEK2	1409.72	2459.09	
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	RVPCGYDTCYDWEK	RVPC(UniMod:4)GYDTC(UniMod:4)YDWEK	3	RVPC(UniMod:4)GYDTC(UniMod:4)YDWEK3	60932.5	68079.1	80565.7
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	RVPCTVLR	RVPC(UniMod:4)TVLR	2	RVPC(UniMod:4)TVLR2	74835.1	61292.8	63452.2
P50609	P50609	FMOD_RAT	Fmod	Fibromodulin	1	RVPDGLPSALEQLYLEHNNVYTVPDSYFR	RVPDGLPSALEQLYLEHNNVYTVPDSYFR	4	RVPDGLPSALEQLYLEHNNVYTVPDSYFR4	19303.4	21799.9	13312.8
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	RVPDHHPC	RVPDHHPC(UniMod:4)	2	RVPDHHPC(UniMod:4)2			21653.9
D4A0T0	D4A0T0	D4A0T0_RAT	Ndufb10	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10	1	RVPDITECK	RVPDITEC(UniMod:4)K	2	RVPDITEC(UniMod:4)K2	25971.9	22709.2	17210.7
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	RVPIPVDR	RVPIPVDR	2	RVPIPVDR2	18106.2	13530.9	15473.6
Q3LRZ1	Q3LRZ1	CRTC2_RAT	Crtc2	CREB-regulated transcription coactivator 2	1	RVPLSPLSLPAGPADAR	RVPLSPLSLPAGPADAR	3	RVPLSPLSLPAGPADAR3	8414.23	6078.4	14178.4
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	RVPLTALLNQGHSER	RVPLTALLNQGHSER	3	RVPLTALLNQGHSER3	11650.8	9955.58	11332.3
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	RVPLTALLNQGHSER	RVPLTALLNQGHSER	4	RVPLTALLNQGHSER4	5689.69		8124.57
Q9WVR7	Q9WVR7	PPM1F_RAT	Ppm1f	Protein phosphatase 1F	1	RVPLTAQAPQR	RVPLTAQAPQR	3	RVPLTAQAPQR3	6132.39	8552.66	7397.9
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	RVPNSVLWLLR	RVPNSVLWLLR	3	RVPNSVLWLLR3	6900.34	4320.78	4876.56
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	RVPPAPPPEAPGR	RVPPAPPPEAPGR	3	RVPPAPPPEAPGR3	10399.4	11990.4	8674.57
P34901	P34901	SDC4_RAT	Sdc4	Syndecan-4	1	RVPSDVGDDDVSNK	RVPSDVGDDDVSNK	3	RVPSDVGDDDVSNK3	19805.9	29244.1	21208.3
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	RVPVLGR	RVPVLGR	2	RVPVLGR2	1689.84		4395.04
B0BNB0	B0BNB0	B0BNB0_RAT	Golt1b	Golgi transport 1B	1	RVPVLGSLLNLPGIR	RVPVLGSLLNLPGIR	3	RVPVLGSLLNLPGIR3	36853.3	46334.1	35454.5
Q6PEC3	Q6PEC3	YIF1B_RAT	Yif1b	Protein YIF1B	1	RVPVSQPGMADPHQFFDDTSSAPSR	RVPVSQPGMADPHQFFDDTSSAPSR	4	RVPVSQPGMADPHQFFDDTSSAPSR4	58020.6	67970	66731.9
P01026	P01026	CO3_RAT	C3	Complement C3	1	RVPVVTQGSDAQALTQDDGVAK	RVPVVTQGSDAQALTQDDGVAK	3	RVPVVTQGSDAQALTQDDGVAK3	20310.7	16689.2	11646.9
P01026	P01026	CO3_RAT	C3	Complement C3	1	RVPVVTQGSDAQALTQDDGVAK	RVPVVTQGSDAQALTQDDGVAK	4	RVPVVTQGSDAQALTQDDGVAK4		3371.63	8132.43
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	RVPVYSAEQR	RVPVYSAEQR	3	RVPVYSAEQR3	9298.57	10117.5	15740.5
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	RVQAILVNIFGGIMR	RVQAILVNIFGGIMR	3	RVQAILVNIFGGIMR3	26128.2	25885	24229.1
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	RVQDLEQK	RVQDLEQK	2	RVQDLEQK2	16854.5	18431.5	6848.53
B2GV14	B2GV14	B2GV14_RAT	Txlna	Taxilin alpha	1	RVQDLTAGGQGSLTDTGSER	RVQDLTAGGQGSLTDTGSER	3	RVQDLTAGGQGSLTDTGSER3	2990.18		
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	RVQEPTLGEDGSSAFFSER	RVQEPTLGEDGSSAFFSER	3	RVQEPTLGEDGSSAFFSER3	10477.4	11970.2	8255.93
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	RVQLAEDLKK	RVQLAEDLKK	3	RVQLAEDLKK3	72642.6	41257.7	72865.3
Q5XFW6	Q5XFW6	WDR6_RAT	Wdr6	WD repeat-containing protein 6	1	RVQNLLGHYLIHGFR	RVQNLLGHYLIHGFR	4	RVQNLLGHYLIHGFR4	7554.62	9375.33	4680.35
P62074	P62074	TIM10_RAT	Timm10	Mitochondrial import inner membrane translocase subunit Tim10	1	RVQQSSGPA	RVQQSSGPA	2	RVQQSSGPA2			26719.6
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	RVQSCPDPAVYGVVQSGDHVGR	RVQSC(UniMod:4)PDPAVYGVVQSGDHVGR	3	RVQSC(UniMod:4)PDPAVYGVVQSGDHVGR3	50598.8	49711.6	36827.8
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	RVQSCPDPAVYGVVQSGDHVGR	RVQSC(UniMod:4)PDPAVYGVVQSGDHVGR	4	RVQSC(UniMod:4)PDPAVYGVVQSGDHVGR4	118297	143882	141841
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	RVQTVVLYGTVGTGK	RVQTVVLYGTVGTGK	2	RVQTVVLYGTVGTGK2	1709.38		
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	RVQTVVLYGTVGTGK	RVQTVVLYGTVGTGK	3	RVQTVVLYGTVGTGK3	90024.2	109588	101048
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	RVSELER	RVSELER	2	RVSELER2	3485.91	10161.8	8427.83
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	RVSETLQEIYNSDWDGHEDLK	RVSETLQEIYNSDWDGHEDLK	3	RVSETLQEIYNSDWDGHEDLK3	1.90542e+06	1.82423e+06	1.89526e+06
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	RVSETLQEIYNSDWDGHEDLK	RVSETLQEIYNSDWDGHEDLK	4	RVSETLQEIYNSDWDGHEDLK4	1.5761e+06	1.74166e+06	1.76896e+06
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	RVSMILQSPAFCEELESMIQEQFK	RVSMILQSPAFC(UniMod:4)EELESMIQEQFK	3	RVSMILQSPAFC(UniMod:4)EELESMIQEQFK3	5326.24	9416.58	10437.8
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	RVSMILQSPAFCEELESMIQEQFKK	RVSMILQSPAFC(UniMod:4)EELESMIQEQFKK	4	RVSMILQSPAFC(UniMod:4)EELESMIQEQFKK4	20101.4	8320.61	
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	RVSQTDNSITLEWR	RVSQTDNSITLEWR	3	RVSQTDNSITLEWR3	103194	145945	138154
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	RVSSTWTTTTSATGLPTLEPAPVR	RVSSTWTTTTSATGLPTLEPAPVR	3	RVSSTWTTTTSATGLPTLEPAPVR3	38329.1	32218	32409.6
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	RVSSTWTTTTSATGLPTLEPAPVRR	RVSSTWTTTTSATGLPTLEPAPVRR	4	RVSSTWTTTTSATGLPTLEPAPVRR4	15446.7	15119.9	26192.8
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	RVSVAVVPK	RVSVAVVPK	2	RVSVAVVPK2		46843.5	39211.8
Q9EPF2	Q9EPF2	MUC18_RAT	Mcam	Cell surface glycoprotein MUC18	1	RVSVGIFGSPWMAAK	RVSVGIFGSPWMAAK	3	RVSVGIFGSPWMAAK3	8739.47	5606.38	7142.3
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	RVTCTTSPMDVSFAEAR	RVTC(UniMod:4)TTSPMDVSFAEAR	3	RVTC(UniMod:4)TTSPMDVSFAEAR3	10238.6	15974.4	12464.5
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	RVTEIIMQK	RVTEIIMQK	2	RVTEIIMQK2	4578.22	3029.64	5305.52
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	RVTELEGQLK	RVTELEGQLK	2	RVTELEGQLK2	2920.08	2559.86	2579.09
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	RVTELEGQLK	RVTELEGQLK	3	RVTELEGQLK3	6268.43		11054.4
A0A8I6AGG9	A0A8I6AGG9	A0A8I6AGG9_RAT	Chchd3	Coiled-coil-helix-coiled-coil-helix domain containing 3	1	RVTFEADENENITVVK	RVTFEADENENITVVK	3	RVTFEADENENITVVK3	8268.29	11867.5	
B2RYF1	B2RYF1	PPR37_RAT	Ppp1r37	Protein phosphatase 1 regulatory subunit 37	1	RVTFPSDEDIVSGAVEPK	RVTFPSDEDIVSGAVEPK	3	RVTFPSDEDIVSGAVEPK3	2997.07	2305.2	2025.75
Q6DGF9	Q6DGF9	ACBD4_RAT	Acbd4	Acyl-CoA-binding domain-containing protein 4	1	RVTGWQEPAVNR	RVTGWQEPAVNR	3	RVTGWQEPAVNR3	7390.38	4790.7	
P84245;Q6LED0	A0A8I6A289;A0A8I6G2H8;P84245;D3ZJ08;Q6LED0;A0A8I6A9Y9;D3ZK97	H31_RAT;H33_RAT	H3-3b	Histone H3.3	0	RVTIMPK	RVTIMPK	2	RVTIMPK2	25530.4	20378.8	18908.6
P11884	P11884;P13601;P51647;Q66HF8;Q63639	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	0	RVTLELGGK	RVTLELGGK	2	RVTLELGGK2	41293.7	28709.4	30991.9
Q5M871	Q5M871	FAIM3_RAT	Fcmr	Fas apoptotic inhibitory molecule 3	1	RVTLKPSLNK	RVTLKPSLNK	3	RVTLKPSLNK3	208321	229605	235487
A0A0U1RRP3	A0A0U1RRP3	A0A0U1RRP3_RAT	Upf3b	UPF3B, regulator of nonsense mediated mRNA decay	1	RVTLLTPQGATGGCIGATAEGAK	RVTLLTPQGATGGC(UniMod:4)IGATAEGAK	3	RVTLLTPQGATGGC(UniMod:4)IGATAEGAK3	6738.03	7030.86	4110.43
Q5FVF4	Q5FVF4	TM7S3_RAT	Tm7sf3	Transmembrane 7 superfamily member 3	1	RVTNILDPSHHIPPLR	RVTNILDPSHHIPPLR	4	RVTNILDPSHHIPPLR4	25871.1	32900.8	31347.5
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	RVTQILQSPAFR	RVTQILQSPAFR	3	RVTQILQSPAFR3	46713.9	48715	45994.6
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	RVTQILQSPAFREDLECLIQEQMK	RVTQILQSPAFREDLEC(UniMod:4)LIQEQMK	4	RVTQILQSPAFREDLEC(UniMod:4)LIQEQMK4	17915	20640.6	20381.5
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	RVTSGVKPASFDK	RVTSGVKPASFDK	3	RVTSGVKPASFDK3	5033.08	3812.55	7297.28
P09330	P09330;A0A0G2JSV3;P60892	PRPS2_RAT	Prps2	Ribose-phosphate pyrophosphokinase 2	0	RVTSIADR	RVTSIADR	2	RVTSIADR2	5266.72	10897.8	4838.49
P58751	P58751	RELN_RAT	Reln	Reelin	1	RVTVILPQK	RVTVILPQK	2	RVTVILPQK2	37259.5	31774	24966.2
D4A7H9	D4A7H9	D4A7H9_RAT	Chmp7	Charged multivesicular body protein 7	1	RVTVLEQNGEK	RVTVLEQNGEK	3	RVTVLEQNGEK3	97074.5	87622.6	98787.1
P58751	P58751	RELN_RAT	Reln	Reelin	1	RVTVYLPLATNSPR	RVTVYLPLATNSPR	3	RVTVYLPLATNSPR3	119626	130236	118648
D3ZG43	D3ZG43	D3ZG43_RAT	Ndufs3	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial	1	RVVAEPVELAQEFR	RVVAEPVELAQEFR	3	RVVAEPVELAQEFR3	24531.3	22876.1	30921.1
D3ZG43	D3ZG43	D3ZG43_RAT	Ndufs3	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial	1	RVVAEPVELAQEFRK	RVVAEPVELAQEFRK	4	RVVAEPVELAQEFRK4	4367.8	3386.44	1170.42
P35565	P35565	CALX_RAT	Canx	Calnexin	1	RVVDDWANDGWGLK	RVVDDWANDGWGLK	2	RVVDDWANDGWGLK2	4069.47		
P35565	P35565	CALX_RAT	Canx	Calnexin	1	RVVDDWANDGWGLK	RVVDDWANDGWGLK	3	RVVDDWANDGWGLK3	31268	32664	32658.2
P35565	P35565	CALX_RAT	Canx	Calnexin	1	RVVDDWANDGWGLKK	RVVDDWANDGWGLKK	3	RVVDDWANDGWGLKK3	19447.5	24550.3	21425.9
P35565	P35565	CALX_RAT	Canx	Calnexin	1	RVVDDWANDGWGLKK	RVVDDWANDGWGLKK	4	RVVDDWANDGWGLKK4	12133.7	10226.2	10097.5
P97689	P97689	UT1_RAT	Slc14a1	Urea transporter 1	1	RVVDSPL	RVVDSPL	2	RVVDSPL2	284366	326839	294932
A0A8I5ZM79	A0A8I5ZM79	A0A8I5ZM79_RAT	Psmd7	Proteasome 26S subunit, non-ATPase 7	1	RVVGVLLGSWQK	RVVGVLLGSWQK	2	RVVGVLLGSWQK2	1336.7	1437.26	1078.12
A0A8I5ZM79	A0A8I5ZM79	A0A8I5ZM79_RAT	Psmd7	Proteasome 26S subunit, non-ATPase 7	1	RVVGVLLGSWQK	RVVGVLLGSWQK	3	RVVGVLLGSWQK3	53460.8	78819.5	42258.6
O55004	O55004	RNAS4_RAT	Rnase4	Ribonuclease 4	1	RVVIACEGTPEVPVHFDR	RVVIAC(UniMod:4)EGTPEVPVHFDR	4	RVVIAC(UniMod:4)EGTPEVPVHFDR4	17603.9	11021.5	9578.43
B5DFN2	B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	1	RVVLLAEGR	RVVLLAEGR	2	RVVLLAEGR2	6246	5754.27	6022.82
Q6AY72	Q6AY72	CS025_RAT		UPF0449 protein C19orf25 homolog	1	RVVLPTRPAPPTVEQILEDVR	RVVLPTRPAPPTVEQILEDVR	4	RVVLPTRPAPPTVEQILEDVR4	10064.3	9902.15	13668.4
P60192	P60192	SNAPN_RAT	Snapin	SNARE-associated protein Snapin	1	RVVLVNNILQNAQER	RVVLVNNILQNAQER	3	RVVLVNNILQNAQER3	1538	1882.26	2211.05
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	RVVLWGSDYSK	RVVLWGSDYSK	3	RVVLWGSDYSK3	16919.1	17539.2	16647
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	RVVPVWCEQQQEGGGWTVIQR	RVVPVWC(UniMod:4)EQQQEGGGWTVIQR	3	RVVPVWC(UniMod:4)EQQQEGGGWTVIQR3	4040.01	8462.03	10771.7
A0A8I6GBD2	A0A8I6GBD2	A0A8I6GBD2_RAT	Actr10	Actin related protein 10	1	RVVVIESVLCPSHFR	RVVVIESVLC(UniMod:4)PSHFR	3	RVVVIESVLC(UniMod:4)PSHFR3	12826.5	14798.3	9044.96
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	RVVVYGGEGDNLK	RVVVYGGEGDNLK	3	RVVVYGGEGDNLK3	15207.9	12398.9	7919.3
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	RVVVYGGEGDNLKK	RVVVYGGEGDNLKK	3	RVVVYGGEGDNLKK3	10306.1	6520.64	9510.04
Q99P74	Q99P74	RB27B_RAT	Rab27b	Ras-related protein Rab-27B	1	RVVYDTQGADGSSGK	RVVYDTQGADGSSGK	2	RVVYDTQGADGSSGK2	38864.4	31044.7	32993.7
Q99P74	Q99P74	RB27B_RAT	Rab27b	Ras-related protein Rab-27B	1	RVVYDTQGADGSSGK	RVVYDTQGADGSSGK	3	RVVYDTQGADGSSGK3	403431	401202	404523
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	RVWELSK	RVWELSK	2	RVWELSK2	252273	261742	224767
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	RVYATILNAGTNTDGCK	RVYATILNAGTNTDGC(UniMod:4)K	3	RVYATILNAGTNTDGC(UniMod:4)K3	8125.34	8381.44	4224.68
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	RVYLATDDPALLK	RVYLATDDPALLK	3	RVYLATDDPALLK3	11846.7	13314.6	15843.6
A0A8I6A182	A0A8I6A182	A0A8I6A182_RAT	Pitpnc1	Phosphatidylinositol transfer protein, cytoplasmic 1	1	RVYLNSK	RVYLNSK	2	RVYLNSK2	7423.86	4154.89	
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	RVYLSECK	RVYLSEC(UniMod:4)K	2	RVYLSEC(UniMod:4)K2	366738	375164	281673
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	RVYSDMDVIPEGR	RVYSDMDVIPEGR	3	RVYSDMDVIPEGR3	27164.5	37708.6	36180.8
P29066	P29066	ARRB1_RAT	Arrb1	Beta-arrestin-1	1	RVYVTLTCAFR	RVYVTLTC(UniMod:4)AFR	3	RVYVTLTC(UniMod:4)AFR3	12390.3	11723.6	14843.6
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	RWAASPK	RWAASPK	2	RWAASPK2	259279	270566	297058
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	RWCALSK	RWC(UniMod:4)ALSK	2	RWC(UniMod:4)ALSK2	398492	417454	423694
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	RWDDVVCESR	RWDDVVC(UniMod:4)ESR	3	RWDDVVC(UniMod:4)ESR3	5579.22	8521.02	7168.12
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	RWDNLVK	RWDNLVK	2	RWDNLVK2	29716.4	40590.3	29798.9
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	RWDQGLEKPR	RWDQGLEKPR	3	RWDQGLEKPR3	163716	184508	176260
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	RWEEVQSYIR	RWEEVQSYIR	3	RWEEVQSYIR3	8230.24	10719.2	4902.22
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	RWEGVNMER	RWEGVNMER	3	RWEGVNMER3	61577.7	63666	84696.8
F7FH41	F7FH41	F7FH41_RAT	Csnk2a2	Casein kinase 2 alpha 2	1	RWENFIHSENR	RWENFIHSENR	3	RWENFIHSENR3	31667.1	39817.7	27365.8
P0C0A2	P0C0A2	VPS36_RAT	Vps36	Vacuolar protein-sorting-associated protein 36	1	RWETVPVSQSLQTK	RWETVPVSQSLQTK	3	RWETVPVSQSLQTK3	12705.3	10872.6	11321.7
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	RWEVAALR	RWEVAALR	2	RWEVAALR2	4756.75	7844.94	11099.1
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	RWEYCDIPR	RWEYC(UniMod:4)DIPR	2	RWEYC(UniMod:4)DIPR2	214635	201645	188775
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	RWEYCDIPR	RWEYC(UniMod:4)DIPR	3	RWEYC(UniMod:4)DIPR3	955998	880272	950000
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	RWEYFIAAEEVIWNYAPVIPANMDK	RWEYFIAAEEVIWNYAPVIPANMDK	4	RWEYFIAAEEVIWNYAPVIPANMDK4	23765.3	19571	12618.3
Q6P7S1	Q6P7S1	ASAH1_RAT	Asah1	Acid ceramidase	1	RWHELLAHK	RWHELLAHK	3	RWHELLAHK3	3015.31	5319.88	
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	RWHIDTIMR	RWHIDTIMR	3	RWHIDTIMR3	92263.5	118186	98711.3
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	RWIAFQILTAVDQAHK	RWIAFQILTAVDQAHK	3	RWIAFQILTAVDQAHK3	2669.97	5477.63	
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	RWIGSETDLEPPVVK	RWIGSETDLEPPVVK	3	RWIGSETDLEPPVVK3	19004.9	23089.3	24484.2
Q5U316	Q5U316	RAB35_RAT	Rab35	Ras-related protein Rab-35	1	RWLHEINQNCDDVCR	RWLHEINQNC(UniMod:4)DDVC(UniMod:4)R	3	RWLHEINQNC(UniMod:4)DDVC(UniMod:4)R3	3607.27	4802.52	2629.28
Q5U316	Q5U316	RAB35_RAT	Rab35	Ras-related protein Rab-35	1	RWLHEINQNCDDVCR	RWLHEINQNC(UniMod:4)DDVC(UniMod:4)R	4	RWLHEINQNC(UniMod:4)DDVC(UniMod:4)R4	8018.42	7122.93	8797.6
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	RWLLLCNPGLADLIAEK	RWLLLC(UniMod:4)NPGLADLIAEK	3	RWLLLC(UniMod:4)NPGLADLIAEK3	23490.5	21949	17219.4
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	RWLPAGDALLQMITIHLPSPVTAQK	RWLPAGDALLQMITIHLPSPVTAQK	4	RWLPAGDALLQMITIHLPSPVTAQK4	7189.19	2609.06	7778.57
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	RWLPAGTGPQAFSR	RWLPAGTGPQAFSR	3	RWLPAGTGPQAFSR3	20635.5	10107.4	17506.9
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	RWLVLCNPGLAEVIAER	RWLVLC(UniMod:4)NPGLAEVIAER	3	RWLVLC(UniMod:4)NPGLAEVIAER3		7016.09	
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	RWMEACLGEDLPPTTELEEGLR	RWMEAC(UniMod:4)LGEDLPPTTELEEGLR	3	RWMEAC(UniMod:4)LGEDLPPTTELEEGLR3	14599.4	16480.7	11583.5
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	RWMEVCLVEELPPTTELEEGLR	RWMEVC(UniMod:4)LVEELPPTTELEEGLR	3	RWMEVC(UniMod:4)LVEELPPTTELEEGLR3	16565.2	14139.3	10230.3
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	RWPVVGVR	RWPVVGVR	2	RWPVVGVR2	6532.33	9493.25	5378.48
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	RWQAFQAVVSEQR	RWQAFQAVVSEQR	3	RWQAFQAVVSEQR3	40011	45282.2	56832.5
Q32KJ5	Q32KJ5	Q32KJ5_RAT	Gns	N-acetylglucosamine-6-sulfatase	1	RWQTLLSVDDLVEK	RWQTLLSVDDLVEK	3	RWQTLLSVDDLVEK3	4629.29	2510.89	1543
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	RWSGNEPTDEFSDLPLR	RWSGNEPTDEFSDLPLR	3	RWSGNEPTDEFSDLPLR3	9720.93	23282.3	15379.5
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	RWSGNESTDDFSELSFR	RWSGNESTDDFSELSFR	3	RWSGNESTDDFSELSFR3	3180.59	2489.81	4036.08
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	RWTDENIDMVALK	RWTDENIDMVALK	3	RWTDENIDMVALK3	38769.5	38090.4	39897.3
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	RWTQLLANSATR	RWTQLLANSATR	3	RWTQLLANSATR3	151413	190840	192639
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	RWVQLFK	RWVQLFK	2	RWVQLFK2	10563.8	14577.9	
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	RWYEEALSISPTHVK	RWYEEALSISPTHVK	3	RWYEEALSISPTHVK3	3086.13	3603.06	1778.54
Q5U1X1	Q5U1X1	ORN_RAT	Rexo2	Oligoribonuclease, mitochondrial	1	RWYPEDYEFAPK	RWYPEDYEFAPK	2	RWYPEDYEFAPK2	5747.89	4447.97	3192.33
Q5U1X1	Q5U1X1	ORN_RAT	Rexo2	Oligoribonuclease, mitochondrial	1	RWYPEDYEFAPK	RWYPEDYEFAPK	3	RWYPEDYEFAPK3	11256.6	9882.83	4768.3
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	RWYVPIQDLLR	RWYVPIQDLLR	2	RWYVPIQDLLR2	36091.2	35640.2	31713.7
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	RWYVPIQDLLR	RWYVPIQDLLR	3	RWYVPIQDLLR3	786137	819971	727570
P04905	P04905	GSTM1_RAT	Gstm1	Glutathione S-transferase Mu 1	1	RYAMGDAPDYDR	RYAMGDAPDYDR	3	RYAMGDAPDYDR3	16579.2	17015.6	15600
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	RYAWGLNELKPISK	RYAWGLNELKPISK	3	RYAWGLNELKPISK3		1810.3	4124.09
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	RYAWGLNELKPISK	RYAWGLNELKPISK	4	RYAWGLNELKPISK4	8553.8	6400.61	10533.8
A0A8I6AAX0	A0A8I6AAX0	A0A8I6AAX0_RAT	ENSRNOG00000064181	Ig-like domain-containing protein	1	RYAYWYQQKPDQSIVR	RYAYWYQQKPDQSIVR	3	RYAYWYQQKPDQSIVR3	16327	18932.4	23210.9
A0A8I6AAX0	A0A8I6AAX0	A0A8I6AAX0_RAT	ENSRNOG00000064181	Ig-like domain-containing protein	1	RYAYWYQQKPDQSIVR	RYAYWYQQKPDQSIVR	4	RYAYWYQQKPDQSIVR4	27758.7	35346.5	33972.2
A0A8I5ZM79	A0A8I5ZM79	A0A8I5ZM79_RAT	Psmd7	Proteasome 26S subunit, non-ATPase 7	1	RYCPNSVLVIIDVKPK	RYC(UniMod:4)PNSVLVIIDVKPK	3	RYC(UniMod:4)PNSVLVIIDVKPK3	7483.96	6999.62	8464.33
A0A8I5ZM79	A0A8I5ZM79	A0A8I5ZM79_RAT	Psmd7	Proteasome 26S subunit, non-ATPase 7	1	RYCPNSVLVIIDVKPK	RYC(UniMod:4)PNSVLVIIDVKPK	4	RYC(UniMod:4)PNSVLVIIDVKPK4	4961.77	5816.22	3029.26
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	RYDDPEVQK	RYDDPEVQK	2	RYDDPEVQK2	24897.6	61604.7	46461.4
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	RYDDPEVQKDTK	RYDDPEVQKDTK	3	RYDDPEVQKDTK3	46468.8		54616.7
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	RYDELQNSSGR	RYDELQNSSGR	3	RYDELQNSSGR3	14980.6	16067.8	12268.3
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	RYDGGLDSGFHSVDSGSK	RYDGGLDSGFHSVDSGSK	3	RYDGGLDSGFHSVDSGSK3	21946.8	22684	26831.2
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	RYDGGLDSGFHSVDSGSK	RYDGGLDSGFHSVDSGSK	4	RYDGGLDSGFHSVDSGSK4	22711	24395.3	11281
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	RYDLSVLAR	RYDLSVLAR	2	RYDLSVLAR2	8195.91	5890.12	3566.97
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	RYDMMGSCSYTMAELCGSDETLPAFSVEAK	RYDMMGSC(UniMod:4)SYTMAELC(UniMod:4)GSDETLPAFSVEAK	4	RYDMMGSC(UniMod:4)SYTMAELC(UniMod:4)GSDETLPAFSVEAK4	10193.3	9717.08	8566.32
D3ZE59	D3ZE59	D3ZE59_RAT	Tmem115	Transmembrane protein 115	1	RYDVGAPSSITISLPGTDPQDAER	RYDVGAPSSITISLPGTDPQDAER	3	RYDVGAPSSITISLPGTDPQDAER3	47307.1	36343.5	33965.7
D3ZYW7	D3ZYW7	FRDA_RAT	Fxn	Frataxin, mitochondrial	1	RYDWTGK	RYDWTGK	2	RYDWTGK2	4210.35	5673.97	
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	RYDYLEFTDSR	RYDYLEFTDSR	2	RYDYLEFTDSR2	5085.6	3535.59	4408.42
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	RYDYLEFTDSR	RYDYLEFTDSR	3	RYDYLEFTDSR3	52269.5	67721.9	58700.3
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	RYEEILDAREEEMTAK	RYEEILDAREEEMTAK	3	RYEEILDAREEEMTAK3	7840.69		7322.47
P62630	P62630;F1M6C2;M0R757	EF1A1_RAT	Eef1a1	Elongation factor 1-alpha 1	0	RYEEIVK	RYEEIVK	2	RYEEIVK2	85935.1	78034.3	82268
Q6MGC4	Q6MGC4	Q6MGC4_RAT	Pfdn6	Prefoldin subunit 6	1	RYESQLR	RYESQLR	2	RYESQLR2			8346.18
Q6P7A9	Q6P7A9	LYAG_RAT	Gaa	Lysosomal alpha-glucosidase	1	RYEVPLETPR	RYEVPLETPR	3	RYEVPLETPR3	5025.12	6132.56	8615.94
A0A8I6AGG9	A0A8I6AGG9	A0A8I6AGG9_RAT	Chchd3	Coiled-coil-helix-coiled-coil-helix domain containing 3	1	RYEYHPVCADLQTK	RYEYHPVC(UniMod:4)ADLQTK	3	RYEYHPVC(UniMod:4)ADLQTK3	30524.5	32961.3	28680.8
A0A8I6AGG9	A0A8I6AGG9	A0A8I6AGG9_RAT	Chchd3	Coiled-coil-helix-coiled-coil-helix domain containing 3	1	RYEYHPVCADLQTK	RYEYHPVC(UniMod:4)ADLQTK	4	RYEYHPVC(UniMod:4)ADLQTK4	28518.5	25462.8	23759.5
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	RYFDENAAEDFEK	RYFDENAAEDFEK	2	RYFDENAAEDFEK2	3135.99	5090.55	
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	RYFDENAAEDFEK	RYFDENAAEDFEK	3	RYFDENAAEDFEK3	54273.9	53134.9	57674.3
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	RYFDGSGGNNHAVEHYR	RYFDGSGGNNHAVEHYR	4	RYFDGSGGNNHAVEHYR4	16975.7	20809.6	37583.2
Q1RP74	Q1RP74	Q1RP74_RAT	Tbcb	Tubulin folding cofactor B	1	RYFECQAK	RYFEC(UniMod:4)QAK	2	RYFEC(UniMod:4)QAK2	23499.3	15270.7	25784
D3ZLZ7	D3ZLZ7	IMDH1_RAT	Impdh1	Inosine-5'-monophosphate dehydrogenase 1	1	RYFSEGDKVK	RYFSEGDKVK	3	RYFSEGDKVK3			4487.92
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	RYFTWDPTR	RYFTWDPTR	2	RYFTWDPTR2	279822	305372	262590
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	RYFTWDPTR	RYFTWDPTR	3	RYFTWDPTR3	325853	335990	332711
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	RYFTWDPTRFPQPLNMLEHLASK	RYFTWDPTRFPQPLNMLEHLASK	4	RYFTWDPTRFPQPLNMLEHLASK4	102667	136534	123853
Q63175	Q63175	SERC5_RAT	Serinc5	Serine incorporator 5	1	RYGAPELEVAR	RYGAPELEVAR	3	RYGAPELEVAR3	13865.1	14094.8	14440.9
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	RYGDFFIR	RYGDFFIR	2	RYGDFFIR2	30402	34533.7	25857.6
Q6AXS4	Q6AXS4	RENR_RAT	Atp6ap2	Renin receptor	1	RYGEDSEQFR	RYGEDSEQFR	3	RYGEDSEQFR3	3795.81	2413.21	3553.31
Q5FWU3	Q5FWU3	ATG9A_RAT	Atg9a	Autophagy-related protein 9A	1	RYGGITDPGTVPR	RYGGITDPGTVPR	3	RYGGITDPGTVPR3	6438.48	5434.36	4717.64
P36970	P36970	GPX4_RAT	Gpx4	Phospholipid hydroperoxide glutathione peroxidase	1	RYGPMEEPQVIEK	RYGPMEEPQVIEK	2	RYGPMEEPQVIEK2	2303.64		3334.89
P36970	P36970	GPX4_RAT	Gpx4	Phospholipid hydroperoxide glutathione peroxidase	1	RYGPMEEPQVIEK	RYGPMEEPQVIEK	3	RYGPMEEPQVIEK3	92679.4	81433	115090
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	RYGQYTMNPESSTK	RYGQYTMNPESSTK	3	RYGQYTMNPESSTK3	8180.76	7811.02	9580.5
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	RYHPLFGNQEELDK	RYHPLFGNQEELDK	3	RYHPLFGNQEELDK3	14712.7	12792.9	14321.3
Q9QZA6	Q9QZA6	CD151_RAT	Cd151	CD151 antigen	1	RYHQSGHEGVTNAVDK	RYHQSGHEGVTNAVDK	2	RYHQSGHEGVTNAVDK2			1127.97
Q9QZA6	Q9QZA6	CD151_RAT	Cd151	CD151 antigen	1	RYHQSGHEGVTNAVDK	RYHQSGHEGVTNAVDK	3	RYHQSGHEGVTNAVDK3			36766.5
Q9QZA6	Q9QZA6	CD151_RAT	Cd151	CD151 antigen	1	RYHQSGHEGVTNAVDK	RYHQSGHEGVTNAVDK	4	RYHQSGHEGVTNAVDK4			19872.7
G3V9R2	Q5FVP9;G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	0	RYIEGQSAK	RYIEGQSAK	2	RYIEGQSAK2			17923.3
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	RYIETDPANR	RYIETDPANR	2	RYIETDPANR2	619221	417749	376513
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	RYIETDPANR	RYIETDPANR	3	RYIETDPANR3	780893	555205	628760
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	RYIETDPANRDR	RYIETDPANRDR	2	RYIETDPANRDR2	16405.8	8524.69	6215.92
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	RYIETDPANRDR	RYIETDPANRDR	3	RYIETDPANRDR3	987983	1.02122e+06	1.05715e+06
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	RYIEYVCDMVAEEPITPHSK	RYIEYVC(UniMod:4)DMVAEEPITPHSK	3	RYIEYVC(UniMod:4)DMVAEEPITPHSK3	4649.25	2799.63	1389.21
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	RYIYDNVAK	RYIYDNVAK	2	RYIYDNVAK2	28473.9	35922.8	30523.6
D3ZZ81	Q91Z80;D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	0	RYLAAQR	RYLAAQR	2	RYLAAQR2	3342.89	4817.92	7008.85
A0A0G2K4S5	A0A0G2K4S5;A0A8J8XB15	A0A0G2K4S5_RAT	RT1-CE1	RT1 class Ia, locus A2	0	RYLELGK	RYLELGK	2	RYLELGK2	13487.6	14359.2	17321.7
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	RYLESLGEEQRK	RYLESLGEEQRK	3	RYLESLGEEQRK3		4014.71	6044.88
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	RYLIFNRPFLVILYSTSSQDILFMGK	RYLIFNRPFLVILYSTSSQDILFMGK	4	RYLIFNRPFLVILYSTSSQDILFMGK4	12486.8	11173.1	8134.97
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	RYLLQPLGDFSR	RYLLQPLGDFSR	3	RYLLQPLGDFSR3	2072.53	6129.51	2217.82
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	RYLNAQKPLLDDSQFR	RYLNAQKPLLDDSQFR	3	RYLNAQKPLLDDSQFR3	5439.47	8652.51	5849.8
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	RYLNAQKPLLDDSQFR	RYLNAQKPLLDDSQFR	4	RYLNAQKPLLDDSQFR4	3860.43	6258.54	7290.6
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	RYLQAVGMFR	RYLQAVGMFR	3	RYLQAVGMFR3	5756.5	11661.1	4768.39
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	RYLQQLAEKPLETR	RYLQQLAEKPLETR	3	RYLQQLAEKPLETR3	5740.71	11867.1	7641.55
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	RYLQQLAEKPLETR	RYLQQLAEKPLETR	4	RYLQQLAEKPLETR4	22827.1	22020.9	20977.3
P17220	P17220	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	1	RYNEDLELEDAIHTAILTLK	RYNEDLELEDAIHTAILTLK	3	RYNEDLELEDAIHTAILTLK3	34928.9	26925.4	35563.6
P17220	P17220	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	1	RYNEDLELEDAIHTAILTLK	RYNEDLELEDAIHTAILTLK	4	RYNEDLELEDAIHTAILTLK4	388490	237598	230558
F1M332	F1M332	F1M332_RAT	Arhgap28	Rho GTPase activating protein 28	1	RYNTYTQTLR	RYNTYTQTLR	3	RYNTYTQTLR3	12279.3	18132.6	9762.08
A0A8I5ZLY7	A0A8I5ZLY7	A0A8I5ZLY7_RAT	Tapbp	TAP binding protein	1	RYPAGAHAPHCEMSSYIPFPASAK	RYPAGAHAPHC(UniMod:4)EMSSYIPFPASAK	4	RYPAGAHAPHC(UniMod:4)EMSSYIPFPASAK4	43129	53178	51716.9
Q3MHS7	Q3MHS7	Q3MHS7_RAT	Gmds	GDP-mannose 4,6-dehydratase	1	RYPGSGDGEMGK	RYPGSGDGEMGK	3	RYPGSGDGEMGK3		3608.76	10991.7
D3ZZL3	D3ZZL3	D3ZZL3_RAT	Naglu	N-acetyl-alpha-glucosaminidase	1	RYPIQPQGDTVDLSK	RYPIQPQGDTVDLSK	3	RYPIQPQGDTVDLSK3	20952.1	22686.9	22369.6
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	RYPLSGLALPTLK	RYPLSGLALPTLK	3	RYPLSGLALPTLK3	26292.5	18841.2	20948.2
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	RYPTPYPDELK	RYPTPYPDELK	2	RYPTPYPDELK2	27397	11900.8	25506.6
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	RYPTPYPDELK	RYPTPYPDELK	3	RYPTPYPDELK3	223450	231969	234487
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	RYQDAPGVEHIPVVQIDLSVPLK	RYQDAPGVEHIPVVQIDLSVPLK	4	RYQDAPGVEHIPVVQIDLSVPLK4	14743.7	26830.6	21623.4
F1LQ09	F1LQ09	F1LQ09_RAT	Atl2	Atlastin GTPase 2	1	RYQDQLEAEIEETYANFIK	RYQDQLEAEIEETYANFIK	3	RYQDQLEAEIEETYANFIK3	3586.59	6997.3	1881.73
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	RYQEALHLGSQLLR	RYQEALHLGSQLLR	3	RYQEALHLGSQLLR3	60152.9	68412.2	78529.8
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	RYQEALHLGSQLLR	RYQEALHLGSQLLR	4	RYQEALHLGSQLLR4	5364.21	3208.5	9319.98
Q64537	Q64537	CPNS1_RAT	Capns1	Calpain small subunit 1	1	RYSDETGNMDFDNFISCLVR	RYSDETGNMDFDNFISC(UniMod:4)LVR	3	RYSDETGNMDFDNFISC(UniMod:4)LVR3	10959.9	24374.6	7618.94
A0A8I6AAD8	A0A8I6AAD8	A0A8I6AAD8_RAT	Snx4	Sorting nexin 4	1	RYSEFELLR	RYSEFELLR	3	RYSEFELLR3	8501.05	10573.5	
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	RYSLIDPASAPELLR	RYSLIDPASAPELLR	3	RYSLIDPASAPELLR3	94732.5	136185	112424
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	RYSSIPQMWSR	RYSSIPQMWSR	3	RYSSIPQMWSR3	20489.8	24093.5	20726.7
Q63598	Q63598	PLST_RAT	Pls3	Plastin-3	1	RYTLNVMEDLGEGQK	RYTLNVMEDLGEGQK	3	RYTLNVMEDLGEGQK3	7774.58	6563.37	
Q64165	Q64165	Q64165_RAT	Gcnt1	Glucosaminyl (N-acetyl) transferase 1	1	RYTVVDGK	RYTVVDGK	2	RYTVVDGK2	12659	11534	12973.1
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	RYVAAAFPSACGK	RYVAAAFPSAC(UniMod:4)GK	2	RYVAAAFPSAC(UniMod:4)GK2	1916.9	3851.35	
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	RYVAAAFPSACGK	RYVAAAFPSAC(UniMod:4)GK	3	RYVAAAFPSAC(UniMod:4)GK3	52148.5	48970.3	58970.6
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	RYVESLLTQLGR	RYVESLLTQLGR	3	RYVESLLTQLGR3	2803.89	3002.28	2493.97
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	RYVESLWK	RYVESLWK	2	RYVESLWK2	34391	35405.4	34143.3
Q63483	Q63483	Q63483_RAT	Rab38	Ras-related protein Rab	1	RYVHQNFSSHYR	RYVHQNFSSHYR	4	RYVHQNFSSHYR4	9257.92	8386.53	8270.79
O54980	O54980	SNG2_RAT	Syngr2	Synaptogyrin-2	1	RYVSQPQVVTR	RYVSQPQVVTR	3	RYVSQPQVVTR3	3277.37	1425.81	5441.27
Q62902	Q62902	LMAN1_RAT	Lman1	Protein ERGIC-53	1	RYVSSLTEEISR	RYVSSLTEEISR	3	RYVSSLTEEISR3	6302.04	7103.32	2246.28
O54857	O54857	PTEN_RAT	Pten	Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN	1	RYVYYYSYLLK	RYVYYYSYLLK	3	RYVYYYSYLLK3	8004.49	7311.67	4513.25
Q5FVP9	Q5FVP9	Q5FVP9_RAT	LOC100361907	Cfh protein	1	RYYQSGETQEFK	RYYQSGETQEFK	3	RYYQSGETQEFK3	8601.04	17476.8	
P01026	P01026	CO3_RAT	C3	Complement C3	1	RYYQTIEIPPK	RYYQTIEIPPK	3	RYYQTIEIPPK3	89658.2	73591.3	75748.2
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	RYYYSVK	RYYYSVK	2	RYYYSVK2		5610.29	
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	SAAAFKPVGSTSVK	SAAAFKPVGSTSVK	2	SAAAFKPVGSTSVK2	19361.4	21853.2	10202.9
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	SAAAFKPVGSTSVK	SAAAFKPVGSTSVK	3	SAAAFKPVGSTSVK3	119139	167042	127548
B0BNI6	B0BNI6	B0BNI6_RAT	Slc25a35	Solute carrier family 25, member 35	1	SAAAGALAGVMGAYLGSPIYMVK	SAAAGALAGVMGAYLGSPIYMVK	3	SAAAGALAGVMGAYLGSPIYMVK3	46641.6		42655.9
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	SAAAIALPPIAR	SAAAIALPPIAR	2	SAAAIALPPIAR2	48848.2	46690.6	40427.5
A0A8I6ASK1	A0A8I6ASK1	A0A8I6ASK1_RAT	P4ha2	procollagen-proline 4-dioxygenase	1	SAADPEGYLAHPVNAYK	SAADPEGYLAHPVNAYK	2	SAADPEGYLAHPVNAYK2		3010.59	2459.4
A0A8I6ASK1	A0A8I6ASK1	A0A8I6ASK1_RAT	P4ha2	procollagen-proline 4-dioxygenase	1	SAADPEGYLAHPVNAYK	SAADPEGYLAHPVNAYK	3	SAADPEGYLAHPVNAYK3	28661.6	31691.2	39057.4
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	SAADSISESVPVGPK	SAADSISESVPVGPK	2	SAADSISESVPVGPK2	240325	238833	228049
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	SAADSISESVPVGPK	SAADSISESVPVGPK	3	SAADSISESVPVGPK3	79756.8	80959.3	81135.6
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	SAAEMVLSDDNFASIVAAVEEGR	SAAEMVLSDDNFASIVAAVEEGR	3	SAAEMVLSDDNFASIVAAVEEGR3	31229.1	22870	43928.2
P70617	P70617	NINJ1_RAT	Ninj1	Ninjurin-1	1	SAAESMLDIALLMANASQLK	SAAESMLDIALLMANASQLK	3	SAAESMLDIALLMANASQLK3	4403.79		
P26772	P26772	CH10_RAT	Hspe1	10 kDa heat shock protein, mitochondrial	1	SAAETVTK	SAAETVTK	1	SAAETVTK1		1091.96	7330.6
P26772	P26772	CH10_RAT	Hspe1	10 kDa heat shock protein, mitochondrial	1	SAAETVTK	SAAETVTK	2	SAAETVTK2	83810.9		330169
P47942	P47942	DPYL2_RAT	Dpysl2	Dihydropyrimidinase-related protein 2	1	SAAEVIAQAR	SAAEVIAQAR	2	SAAEVIAQAR2	18631.7	15962.9	20901.8
P46844	P46844	BIEA_RAT	Blvra	Biliverdin reductase A	1	SAAFLNLIGFVSR	SAAFLNLIGFVSR	2	SAAFLNLIGFVSR2	4624.2	3169.42	6256.7
Q75Q41	Q75Q41	TOM22_RAT	Tomm22	Mitochondrial import receptor subunit TOM22 homolog	1	SAAGATFDLSLFVAQK	SAAGATFDLSLFVAQK	2	SAAGATFDLSLFVAQK2		2859.82	
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	SAAIHRDPSLPYLEQYR	SAAIHRDPSLPYLEQYR	3	SAAIHRDPSLPYLEQYR3	4763.64	5502.06	8270.09
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	SAAIHRDPSLPYLEQYR	SAAIHRDPSLPYLEQYR	4	SAAIHRDPSLPYLEQYR4	41642.6	56298.7	54433.1
Q4G017	Q4G017	NISCH_RAT	Nisch	Nischarin	1	SAAIPYWLLLTSQHLNVIK	SAAIPYWLLLTSQHLNVIK	3	SAAIPYWLLLTSQHLNVIK3		13280.4	6364.94
D4ADF6	D4ADF6	D4ADF6_RAT	Zfyve16	Zinc finger FYVE-type containing 16	1	SAALDGETDLLK	SAALDGETDLLK	2	SAALDGETDLLK2	13534.8	6377.21	6738.21
D3ZQI6	D3ZQI6	D3ZQI6_RAT	Xpo4	Exportin 4	1	SAALEEVLDKDDMVYMEAYDK	SAALEEVLDKDDMVYMEAYDK	3	SAALEEVLDKDDMVYMEAYDK3	8805.2	7146.22	7049.87
D4ABB8	D4ABB8	ATP9B_RAT	Atp9b	Probable phospholipid-transporting ATPase IIB	1	SAALGQFVMHR	SAALGQFVMHR	3	SAALGQFVMHR3	2989.63		2582.68
A0A8I5ZV77	A0A8I5ZV77	A0A8I5ZV77_RAT	Mrps36	Mitochondrial ribosomal protein S36	1	SAALPSHSSVISQHSK	SAALPSHSSVISQHSK	3	SAALPSHSSVISQHSK3	93298.7	77704	78139.8
A0A8I5ZV77	A0A8I5ZV77	A0A8I5ZV77_RAT	Mrps36	Mitochondrial ribosomal protein S36	1	SAALPSHSSVISQHSK	SAALPSHSSVISQHSK	4	SAALPSHSSVISQHSK4	37089.1	27937	40954.6
A0A8I6A678	A0A8I6A678	A0A8I6A678_RAT	Snx2	Sorting nexin-2	1	SAAMLGNSEDHTALSR	SAAMLGNSEDHTALSR	3	SAAMLGNSEDHTALSR3	36679.5	34627.7	37083.2
O08658	O08658	NUP88_RAT	Nup88	Nuclear pore complex protein Nup88	1	SAANPALLK	SAANPALLK	2	SAANPALLK2	13945.7	6970.42	5998.92
B1WBR6	B1WBR6	B1WBR6_RAT	Tmem129	Tmem129 protein	1	SAANVVIR	SAANVVIR	2	SAANVVIR2	5530.6	3088.26	3827.92
F1M1D2	F1M1D2	F1M1D2_RAT	Tab3	TGF-beta activated kinase 1/MAP3K7 binding protein 3	1	SAAPEPIQPISVIPGSGGEK	SAAPEPIQPISVIPGSGGEK	2	SAAPEPIQPISVIPGSGGEK2	6010.42	6291	3161.7
P10716	P10716	CLC4F_RAT	Clec4f	C-type lectin domain family 4 member F	1	SAAPMAPR	SAAPMAPR	2	SAAPMAPR2	24772.8	29325.9	33758
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	SAAPSAASSPAEVQSLK	SAAPSAASSPAEVQSLK	2	SAAPSAASSPAEVQSLK2	24215.6	20545.6	20297.8
Q4FZX7	Q4FZX7	SRPRB_RAT	Srprb	Signal recognition particle receptor subunit beta	1	SAAPSTLDSSSTAPAQLGK	SAAPSTLDSSSTAPAQLGK	2	SAAPSTLDSSSTAPAQLGK2	82597.4	75543.4	91157
Q4FZX7	Q4FZX7	SRPRB_RAT	Srprb	Signal recognition particle receptor subunit beta	1	SAAPSTLDSSSTAPAQLGK	SAAPSTLDSSSTAPAQLGK	3	SAAPSTLDSSSTAPAQLGK3	17095.2	11084.9	15305
Q6AXS5	Q6AXS5	SERB1_RAT	Serbp1	SERPINE1 mRNA-binding protein 1	1	SAAQAAAQTNSNAAGK	SAAQAAAQTNSNAAGK	2	SAAQAAAQTNSNAAGK2	63970.9		2092.75
Q9QZN9	Q9QZN9	CNR2_RAT	Cnr2	Cannabinoid receptor 2	1	SAAQHCLTGWK	SAAQHC(UniMod:4)LTGWK	2	SAAQHC(UniMod:4)LTGWK2	1625.19		
Q9QZN9	Q9QZN9	CNR2_RAT	Cnr2	Cannabinoid receptor 2	1	SAAQHCLTGWK	SAAQHC(UniMod:4)LTGWK	3	SAAQHC(UniMod:4)LTGWK3	15409.4	17203.5	10853.7
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	SAASETYMSK	SAASETYMSK	2	SAASETYMSK2	62956.7	66546.6	60532.4
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	SAASGVPYHSEVPVSLK	SAASGVPYHSEVPVSLK	2	SAASGVPYHSEVPVSLK2	69792.6	49112	59502.7
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	SAASGVPYHSEVPVSLK	SAASGVPYHSEVPVSLK	3	SAASGVPYHSEVPVSLK3	90782.4	118261	134923
D4A9N5	D4A9N5	D4A9N5_RAT	Trim25	Tripartite motif-containing 25	1	SAASSSDTQVSCDHCLK	SAASSSDTQVSC(UniMod:4)DHC(UniMod:4)LK	3	SAASSSDTQVSC(UniMod:4)DHC(UniMod:4)LK3	15193	17985.8	18382.5
A0A8I6AK45	A0A8I6AK45	A0A8I6AK45_RAT	Mtch2	Mitochondrial carrier 2	1	SAATLITHPFHVITLR	SAATLITHPFHVITLR	3	SAATLITHPFHVITLR3	48244.8	29517.6	30360.8
A0A8I6AK45	A0A8I6AK45	A0A8I6AK45_RAT	Mtch2	Mitochondrial carrier 2	1	SAATLITHPFHVITLR	SAATLITHPFHVITLR	4	SAATLITHPFHVITLR4	122648	112502	109306
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	SAATSGAGSTTSGVVSGSLGSR	SAATSGAGSTTSGVVSGSLGSR	2	SAATSGAGSTTSGVVSGSLGSR2	6418.85	9443.79	7323.62
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	SAATSGAGSTTSGVVSGSLGSR	SAATSGAGSTTSGVVSGSLGSR	3	SAATSGAGSTTSGVVSGSLGSR3	12330.6	14882.3	12073.9
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	SAAVLALSDSHAQLQSQVEK	SAAVLALSDSHAQLQSQVEK	3	SAAVLALSDSHAQLQSQVEK3	19212.2	17877.6	15478.4
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	SAAVVTAISLYMR	SAAVVTAISLYMR	2	SAAVVTAISLYMR2	9916.98	14220.7	13066.6
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	SACDTVDTWLDDTAK	SAC(UniMod:4)DTVDTWLDDTAK	2	SAC(UniMod:4)DTVDTWLDDTAK2	124930	138527	120624
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	SACDTVDTWLDDTAK	SAC(UniMod:4)DTVDTWLDDTAK	3	SAC(UniMod:4)DTVDTWLDDTAK3	42894.7	49331.3	51400.3
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	SACEQFIQQQTR	SAC(UniMod:4)EQFIQQQTR	2	SAC(UniMod:4)EQFIQQQTR2	5086.46	5677.9	5086.01
Q5XID1	Q5XID1	CPIN1_RAT	Ciapin1	Anamorsin	1	SACGNCYLGDAFR	SAC(UniMod:4)GNC(UniMod:4)YLGDAFR	2	SAC(UniMod:4)GNC(UniMod:4)YLGDAFR2	3572.85		3590.06
D4A4W9	D4A4W9	D4A4W9_RAT	Rpl34-ps1	60S ribosomal protein L34	1	SACGVCPGR	SAC(UniMod:4)GVC(UniMod:4)PGR	2	SAC(UniMod:4)GVC(UniMod:4)PGR2	30393.5	30143.1	
Q6AY63	Q6AY63	NUDT5_RAT	Nudt5	ADP-sugar pyrophosphatase	1	SADAVSVIPVLQR	SADAVSVIPVLQR	2	SADAVSVIPVLQR2	25703.2	26415.9	26896.5
A0A8I6GIL4	A0A8I6GIL4	A0A8I6GIL4_RAT	Tmem87a	Transmembrane protein 87A	1	SADCYNEVYNFK	SADC(UniMod:4)YNEVYNFK	2	SADC(UniMod:4)YNEVYNFK2	10752.2	9475.81	8472.57
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	SADDFIDK	SADDFIDK	2	SADDFIDK2	83013	108844	102746
A0A8I5ZXL6	A0A8I5ZXL6	A0A8I5ZXL6_RAT	Plekha7	Pleckstrin homology domain containing A7	1	SADDTYLQLK	SADDTYLQLK	2	SADDTYLQLK2	5195.87	3186.87	4690.97
A0A0G2K3D9	A0A0G2K3D9	A0A0G2K3D9_RAT	Tmem132b	Transmembrane protein 132B	1	SADEDVVK	SADEDVVK	2	SADEDVVK2	10224.2	10716.8	11432.7
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	SADESGQALLAAGHYASDEVR	SADESGQALLAAGHYASDEVR	3	SADESGQALLAAGHYASDEVR3	223469	325422	287126
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	SADEVDDSAVELK	SADEVDDSAVELK	2	SADEVDDSAVELK2	27532.8	12825.9	15165.2
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	SADEVLFSGVK	SADEVLFSGVK	2	SADEVLFSGVK2	56526.3	61161.9	70136.2
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	SADEVLFSGVKEVDDFFEQEK	SADEVLFSGVKEVDDFFEQEK	3	SADEVLFSGVKEVDDFFEQEK3	10949	5829.66	15202.7
F1LU14	F1LU14	F1LU14_RAT	Snx32	Sorting nexin	1	SADEVLITGISGLK	SADEVLITGISGLK	2	SADEVLITGISGLK2	3844.58		
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	SADFVVEAIGDDVGTLGFSVEGPSQAK	SADFVVEAIGDDVGTLGFSVEGPSQAK	3	SADFVVEAIGDDVGTLGFSVEGPSQAK3	423493	352200	355031
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	SADFVVEAIGDDVGTLGFSVEGPSQAK	SADFVVEAIGDDVGTLGFSVEGPSQAK	4	SADFVVEAIGDDVGTLGFSVEGPSQAK4	4971.94	7043.51	7898.77
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	SADFVVESIGSEVGTLGFAIEGPSQAK	SADFVVESIGSEVGTLGFAIEGPSQAK	3	SADFVVESIGSEVGTLGFAIEGPSQAK3	44827.4	51563.7	63081.8
D4A8B0	D4A8B0	D4A8B0_RAT	Sec14l5	SEC14-like lipid binding 5	1	SADGAVHTVER	SADGAVHTVER	2	SADGAVHTVER2		4254.82	
Q5CZZ9	Q5CZZ9	PI51B_RAT	Pip5k1b	Phosphatidylinositol 4-phosphate 5-kinase type-1 beta	1	SADGIIAENPDTMGGIPAK	SADGIIAENPDTMGGIPAK	2	SADGIIAENPDTMGGIPAK2	7035.49	9457.4	9954.67
A0A8I5ZS69	A0A8I5ZS69	A0A8I5ZS69_RAT	Snx6	Sorting nexin	1	SADGVIVSGVK	SADGVIVSGVK	2	SADGVIVSGVK2	26179.1	42323.8	42366
A0A8I5ZS69	A0A8I5ZS69	A0A8I5ZS69_RAT	Snx6	Sorting nexin	1	SADGVIVSGVKDVDDFFEHER	SADGVIVSGVKDVDDFFEHER	4	SADGVIVSGVKDVDDFFEHER4	59910.2	61780	62381.5
Q498T4	Q498T4	RM02_RAT	Mrpl2	Large ribosomal subunit protein uL2m	1	SADIALVAGGSR	SADIALVAGGSR	2	SADIALVAGGSR2	5444.36	6124.04	7107.17
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	SADLEHDQTMLDK	SADLEHDQTMLDK	3	SADLEHDQTMLDK3	10391.1	17326	17335.2
A0A0G2K2G7	A0A0G2K2G7	A0A0G2K2G7_RAT	Anks1a	Ankyrin repeat and sterile alpha motif domain containing 1A	1	SADLLLPSVDTSR	SADLLLPSVDTSR	2	SADLLLPSVDTSR2	23556.8	17361.1	17849.7
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	SADMQFEYNFASGNK	SADMQFEYNFASGNK	2	SADMQFEYNFASGNK2	6821.76	7112.94	7203.7
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	SADMWSFAVLLWELVTR	SADMWSFAVLLWELVTR	3	SADMWSFAVLLWELVTR3	4948.81		
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	SADPAQPQLR	SADPAQPQLR	2	SADPAQPQLR2	164767	169059	192153
D4A0G9	D4A0G9	D4A0G9_RAT	Ercc6l	ERCC excision repair 6 like, spindle assembly checkpoint helicase	1	SADPEVMR	SADPEVMR	2	SADPEVMR2	25943.9	22424.5	26688.5
A0A8I6AA52	A0A8I6AA52	A0A8I6AA52_RAT	Wdr48	WD repeat-containing protein 48	1	SADPPPAIWVATTK	SADPPPAIWVATTK	2	SADPPPAIWVATTK2	28896.6	31971.5	20707.6
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	SADQLTTFLK	SADQLTTFLK	2	SADQLTTFLK2	36808	43889	44182.4
Q5M936	Q5M936	TOR3A_RAT	Tor3a	Torsin-3A	1	SADSSFGSSR	SADSSFGSSR	2	SADSSFGSSR2	46655.7	60999.8	44420.8
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	SADTFRQEK	SADTFRQEK	2	SADTFRQEK2	30088.1		13216.1
A0A8I6ASS6	A0A8I6ASS6	A0A8I6ASS6_RAT	AC098459.1	L-lactate dehydrogenase	1	SADTIWGIQK	SADTIWGIQK	2	SADTIWGIQK2	1.48312e+06	1.43205e+06	
P42123	P42123	LDHB_RAT	Ldhb	L-lactate dehydrogenase B chain	1	SADTLWDIQK	SADTLWDIQK	2	SADTLWDIQK2	15266.7	7590.55	15281.6
P04642	P04642;A0A8I6AAU7;A0A8I6GAC3	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	SADTLWGIQK	SADTLWGIQK	2	SADTLWGIQK2			1.15593e+06
G3V912	G3V912	G3V912_RAT	Tmx4	Thioredoxin-related transmembrane protein 4	1	SADTQDVVEDSLR	SADTQDVVEDSLR	2	SADTQDVVEDSLR2	36743.7	26287	27777.7
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	SADVEPVSASAAHILGEVCR	SADVEPVSASAAHILGEVC(UniMod:4)R	3	SADVEPVSASAAHILGEVC(UniMod:4)R3	1.34692e+06	1.37716e+06	1.51441e+06
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	SADVNVFAVGVEDADER	SADVNVFAVGVEDADER	2	SADVNVFAVGVEDADER2	6440.83		5278.05
Q63372	Q63372;Q07310	NRX1A_RAT	Nrxn1	Neurexin-1	0	SADYVNLALK	SADYVNLALK	2	SADYVNLALK2	16202.8	9230.98	8583.03
Q4KLZ6	Q4KLZ6	TKFC_RAT	Tkfc	Triokinase/FMN cyclase	1	SAEAAAEATK	SAEAAAEATK	2	SAEAAAEATK2			10519.5
D3ZHW0	D3ZHW0	D3ZHW0_RAT	Dhx29	ATP-dependent RNA helicase DHX29	1	SAEAGAVGEAQSK	SAEAGAVGEAQSK	2	SAEAGAVGEAQSK2		25676.2	
A1A5P5	A1A5P5	ARMC9_RAT	Armc9	LisH domain-containing protein ARMC9	1	SAECAEPVLSSGAQKPK	SAEC(UniMod:4)AEPVLSSGAQKPK	3	SAEC(UniMod:4)AEPVLSSGAQKPK3	3988.36	2443.31	
A0A8I5Y153	A0A8I5Y153	A0A8I5Y153_RAT	Llgl2	LLGL scribble cell polarity complex component 2	1	SAEDSFTGFVR	SAEDSFTGFVR	2	SAEDSFTGFVR2	6797.27	2906.18	3183.83
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	SAEEAASVLATSISPEQCIK	SAEEAASVLATSISPEQC(UniMod:4)IK	3	SAEEAASVLATSISPEQC(UniMod:4)IK3	14025.6	14744.8	15198.9
P41243	P41243	MATK_RAT	Matk	Megakaryocyte-associated tyrosine-protein kinase	1	SAEEELAK	SAEEELAK	2	SAEEELAK2	38454.4	43892.5	42578.9
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	SAEELQQALAK	SAEELQQALAK	2	SAEELQQALAK2	6935.68	4527.69	3615.24
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	SAEETFQLSR	SAEETFQLSR	2	SAEETFQLSR2	18119.9	18216.1	19718.2
O70467	O70467	ANM3_RAT	Prmt3	Protein arginine N-methyltransferase 3	1	SAEETFSHCK	SAEETFSHC(UniMod:4)K	3	SAEETFSHC(UniMod:4)K3	4849.8	5987.51	4765.6
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	SAEEVTMSPAITIMR	SAEEVTMSPAITIMR	2	SAEEVTMSPAITIMR2	3063.96	5925	3881.31
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	SAEEVTMSPAITIMRPILR	SAEEVTMSPAITIMRPILR	3	SAEEVTMSPAITIMRPILR3	22620.7	25020.3	30490.3
P24049	D3Z9G9;A0A8I5ZRW8;A0A8I6A6U8;P24049;A0A8I5ZUD0	RL17_RAT	Rpl17	Large ribosomal subunit protein uL22	0	SAEFLLHMLK	SAEFLLHMLK	2	SAEFLLHMLK2	16472.2	8735.56	21123.3
P24049	D3Z9G9;A0A8I5ZRW8;A0A8I6A6U8;P24049;A0A8I5ZUD0	RL17_RAT	Rpl17	Large ribosomal subunit protein uL22	0	SAEFLLHMLK	SAEFLLHMLK	3	SAEFLLHMLK3	19207.8	22328.6	6400.99
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	SAEGLEPSHDFGREEDTR	SAEGLEPSHDFGREEDTR	3	SAEGLEPSHDFGREEDTR3	28323.5	16528	9768.98
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	SAEGLEPSHDFGREEDTR	SAEGLEPSHDFGREEDTR	4	SAEGLEPSHDFGREEDTR4	24868.1	34738.9	27862.6
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	SAEGSTVPLTR	SAEGSTVPLTR	2	SAEGSTVPLTR2	23478.8	18774.6	16575.8
Q4KLN3	Q4KLN3	Q4KLN3_RAT	Srpk1	SRSF protein kinase 1	1	SAEHYTETALDEIR	SAEHYTETALDEIR	2	SAEHYTETALDEIR2		2107.43	
Q4KLN3	Q4KLN3	Q4KLN3_RAT	Srpk1	SRSF protein kinase 1	1	SAEHYTETALDEIR	SAEHYTETALDEIR	3	SAEHYTETALDEIR3	17818.2	19099.4	20972
Q8VHF0	Q8VHF0	MARK3_RAT	Mark3	MAP/microtubule affinity-regulating kinase 3	1	SAELDASDSSSSSNLSLAK	SAELDASDSSSSSNLSLAK	2	SAELDASDSSSSSNLSLAK2	3099.89		
A0A8I5ZXX2	A0A8I5ZXX2	A0A8I5ZXX2_RAT	Kdm3b	Lysine-specific demethylase	1	SAELLLGK	SAELLLGK	2	SAELLLGK2	26367.2	23094.2	25737.2
I6LBX3	I6LBX3	I6LBX3_RAT	Pcdhga5	Protocadherin gamma subfamily A, 1	1	SAEPGYLVTK	SAEPGYLVTK	2	SAEPGYLVTK2	10766.4	17436.3	10343.6
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	SAEQLSNFLR	SAEQLSNFLR	2	SAEQLSNFLR2	55681.8	62271	63830.3
Q63515	Q63515	C4BPB_RAT	C4bpb	C4b-binding protein beta chain	1	SAEQSALEK	SAEQSALEK	1	SAEQSALEK1	45615.6	44571.3	46479
Q63515	Q63515	C4BPB_RAT	C4bpb	C4b-binding protein beta chain	1	SAEQSALEK	SAEQSALEK	2	SAEQSALEK2	13461.8	12628.3	8.15267e+06
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	SAERPQWDSVLHR	SAERPQWDSVLHR	4	SAERPQWDSVLHR4	12646.4	13247	8129.6
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	SAEVDDGASEK	SAEVDDGASEK	2	SAEVDDGASEK2			8197.95
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	SAEVDDGASEKETVPEFGEGK	SAEVDDGASEKETVPEFGEGK	3	SAEVDDGASEKETVPEFGEGK3	23694.5	28595.8	31328.7
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	SAEVDSDDTGGSAAQK	SAEVDSDDTGGSAAQK	2	SAEVDSDDTGGSAAQK2	70178.9		147771
P30427	P30427	PLEC_RAT	Plec	Plectin	1	SAEVELQSK	SAEVELQSK	2	SAEVELQSK2	9372.62	5242.44	
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	SAFDQCADSAQPGGTFR	SAFDQC(UniMod:4)ADSAQPGGTFR	2	SAFDQC(UniMod:4)ADSAQPGGTFR2	42933.8	45237	43194.3
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	SAFDQCADSAQPGGTFR	SAFDQC(UniMod:4)ADSAQPGGTFR	3	SAFDQC(UniMod:4)ADSAQPGGTFR3	14360.2	14868.2	16776.9
G3V828	G3V828	G3V828_RAT	Cnpy3	Canopy FGF signaling regulator 3	1	SAFEETGK	SAFEETGK	2	SAFEETGK2		9614.92	13967.2
P0C2X9	P0C2X9	AL4A1_RAT	Aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1	SAFEYGGQK	SAFEYGGQK	2	SAFEYGGQK2	82021.6	64952.1	103100
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	SAFHVVAAK	SAFHVVAAK	2	SAFHVVAAK2	7221.86	6832.1	7263.29
Q5PQL2	Q5PQL2	CNOT9_RAT	Cnot9	CCR4-NOT transcription complex subunit 9	1	SAFLAAHIPLFLYPFLHTVSK	SAFLAAHIPLFLYPFLHTVSK	3	SAFLAAHIPLFLYPFLHTVSK3	538.837	2283.34	
D3ZMA2	D3ZMA2	D3ZMA2_RAT	Mtmr14	Myotubularin related protein 14	1	SAFLAAYSSTVR	SAFLAAYSSTVR	2	SAFLAAYSSTVR2	33394.6	33540	25434
A0A8I5ZQ92;Q566E4	Q566E4;A0A8I5ZQ92	A0A8I5ZQ92_RAT;Q566E4_RAT	Hnrnpr;Hnrnpr-ps2	Heterogeneous nuclear ribonucleoprotein R-like	0	SAFLCGVMK	SAFLC(UniMod:4)GVMK	2	SAFLC(UniMod:4)GVMK2	27107.8	16710.2	22304.5
Q6IMX7	Q6IMX7	HPBP1_RAT	Hspbp1	Hsp70-binding protein 1	1	SAFLLQNLLVGHPEHK	SAFLLQNLLVGHPEHK	3	SAFLLQNLLVGHPEHK3	8658.87		3923.55
Q6IMX7	Q6IMX7	HPBP1_RAT	Hspbp1	Hsp70-binding protein 1	1	SAFLLQNLLVGHPEHK	SAFLLQNLLVGHPEHK	4	SAFLLQNLLVGHPEHK4	9940.24	8654.64	1798.16
Q7TSA0	Q7TSA0	MIRO2_RAT	Rhot2	Mitochondrial Rho GTPase 2	1	SAFLQAFLGHSLGEAR	SAFLQAFLGHSLGEAR	3	SAFLQAFLGHSLGEAR3	5470.5	6885.51	3896.7
D3ZHZ3	D3ZHZ3	D3ZHZ3_RAT	Osbpl3	Oxysterol-binding protein	1	SAFNSISMER	SAFNSISMER	2	SAFNSISMER2	16749	8428.82	16480.4
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	SAFPCFDEPAFK	SAFPC(UniMod:4)FDEPAFK	2	SAFPC(UniMod:4)FDEPAFK2	69150.5	61896.7	94017.4
Q5XIL4	Q5XIL4	Q5XIL4_RAT	Sorbs3	Sorbin and SH3 domain containing 3	1	SAFPFPITLQEPR	SAFPFPITLQEPR	2	SAFPFPITLQEPR2	34631.3	24684.9	31592.3
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	SAFPFSDK	SAFPFSDK	1	SAFPFSDK1	7198.82	7754.15	3199.33
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	SAFPFSDK	SAFPFSDK	2	SAFPFSDK2	315967	323036	307267
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	SAFPHLQDAQVK	SAFPHLQDAQVK	3	SAFPHLQDAQVK3	16189.8	12595.5	14172.3
D3ZCK2	D3ZCK2	D3ZCK2_RAT	Nkiras2	NFKB inhibitor interacting Ras-like 2	1	SAFPLSR	SAFPLSR	2	SAFPLSR2	20036.2	16061.9	8292.9
Q71RP1	Q71RP1	HPSE_RAT	Hpse	Heparanase	1	SAFQNAK	SAFQNAK	1	SAFQNAK1	6903.35	7722.87	6515.05
Q71RP1	Q71RP1	HPSE_RAT	Hpse	Heparanase	1	SAFQNAK	SAFQNAK	2	SAFQNAK2	392855	391352	384735
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	SAFSEEVNIK	SAFSEEVNIK	2	SAFSEEVNIK2	12962.7	20703.1	24940.8
A0A8I5ZWI8	A0A8I5ZWI8	A0A8I5ZWI8_RAT	Dnajc19	DnaJ heat shock protein family (Hsp40) member C19	1	SAFSGGYYR	SAFSGGYYR	2	SAFSGGYYR2	13312.3	13672.8	17576.2
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	SAFSNLFGGEPLSYTR	SAFSNLFGGEPLSYTR	2	SAFSNLFGGEPLSYTR2	67327.1	46026.2	48811.3
F7EXP7	F7EXP7	F7EXP7_RAT	Snx7	Sorting nexin 7	1	SAFTDTAEENIR	SAFTDTAEENIR	2	SAFTDTAEENIR2	1979.28	3544.17	2828.49
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	SAFTPATATGSSPSPVLGQGEK	SAFTPATATGSSPSPVLGQGEK	3	SAFTPATATGSSPSPVLGQGEK3	4175.62	2980.15	
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	SAFVVER	SAFVVER	2	SAFVVER2	56010.5	51516.6	61069.9
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	SAGACTAAAFLR	SAGAC(UniMod:4)TAAAFLR	2	SAGAC(UniMod:4)TAAAFLR2	32691.1	25606.8	36162.2
D4A529	D4A529	D4A529_RAT	She	Src homology 2 domain containing E	1	SAGCSTYISR	SAGC(UniMod:4)STYISR	2	SAGC(UniMod:4)STYISR2	51424.1	44604.4	32837.5
P70483	P70483	STRN_RAT	Strn	Striatin	1	SAGDGTDWEK	SAGDGTDWEK	2	SAGDGTDWEK2	89859	90833.7	99077.6
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	SAGDQPPLLTPK	SAGDQPPLLTPK	2	SAGDQPPLLTPK2	12824.5	6717.5	4223.02
E9PU10	E9PU10	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	1	SAGEAFCSVK	SAGEAFC(UniMod:4)SVK	2	SAGEAFC(UniMod:4)SVK2	89812.1	85594.6	86904.9
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	SAGEVLMTISR	SAGEVLMTISR	2	SAGEVLMTISR2	13118.3	13376.4	
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	SAGEYEER	SAGEYEER	2	SAGEYEER2	13022.8		14119
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	SAGFHPSGSVLAVGTVTGR	SAGFHPSGSVLAVGTVTGR	3	SAGFHPSGSVLAVGTVTGR3	54669.7	42899.9	55712.9
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	SAGFIPIKEDFSPEK	SAGFIPIKEDFSPEK	3	SAGFIPIKEDFSPEK3	12840.9	19148.3	10295
B2RZ97	B2RZ97	B2RZ97_RAT	Kcmf1	E3 ubiquitin-protein ligase KCMF1	1	SAGGQLNSSGPSASQLQQLQMQLQLER	SAGGQLNSSGPSASQLQQLQMQLQLER	3	SAGGQLNSSGPSASQLQQLQMQLQLER3	3226.94	2327.71	1604.72
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	SAGHHLVPVK	SAGHHLVPVK	2	SAGHHLVPVK2		5548.6	6849.15
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	SAGHHLVPVKENLVDK	SAGHHLVPVKENLVDK	3	SAGHHLVPVKENLVDK3	218995	203087	230591
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	SAGHHLVPVKENLVDK	SAGHHLVPVKENLVDK	4	SAGHHLVPVKENLVDK4	26552	25295.5	33389.1
Q80VJ4	Q80VJ4	GPCP1_RAT	Gpcpd1	Glycerophosphocholine phosphodiesterase GPCPD1	1	SAGILTLPIMSR	SAGILTLPIMSR	2	SAGILTLPIMSR2	45184.3	35652.7	34058.3
A0A8I6GK77	A0A8I6GK77	A0A8I6GK77_RAT	Bcas3	BCAS3, microtubule associated cell migration factor	1	SAGLEEIEQELTSK	SAGLEEIEQELTSK	2	SAGLEEIEQELTSK2	27793.9	28489.7	23774.9
Q9JK72	Q9JK72	CCS_RAT	Ccs	Copper chaperone for superoxide dismutase	1	SAGLFQNPK	SAGLFQNPK	2	SAGLFQNPK2	122101	115643	121225
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	SAGPPSPSSR	SAGPPSPSSR	2	SAGPPSPSSR2	95970.5	79252.2	91682.9
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	SAGQGEVLVYVEDPAGHQEEAK	SAGQGEVLVYVEDPAGHQEEAK	3	SAGQGEVLVYVEDPAGHQEEAK3	93644.6	62464.3	71372.3
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	SAGQGEVLVYVEDPAGHQEEAK	SAGQGEVLVYVEDPAGHQEEAK	4	SAGQGEVLVYVEDPAGHQEEAK4	24221.4	22413.8	10556.5
Q5XIC1	Q5XIC1	GMPPA_RAT	Gmppa	Mannose-1-phosphate guanyltransferase alpha	1	SAGSALYASR	SAGSALYASR	2	SAGSALYASR2	20520.4	17189.9	19733.3
A0A8I6A5H5	A0A8I6ABJ7;A0A8I6A5H5	A0A8I6A5H5_RAT	Rela	RELA proto-oncogene, NF-kB subunit	0	SAGSIPGER	SAGSIPGER	2	SAGSIPGER2	81725.4	122437	117112
A0A8I6A538	A0A8I6A538	A0A8I6A538_RAT	Nin	Ninein	1	SAGTHSPSSHWDLQLLQQQACPMVPR	SAGTHSPSSHWDLQLLQQQAC(UniMod:4)PMVPR	4	SAGTHSPSSHWDLQLLQQQAC(UniMod:4)PMVPR4	2995.05	3898.38	
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	SAGVDDQENWHEGK	SAGVDDQENWHEGK	2	SAGVDDQENWHEGK2	1427.35		
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	SAGVDDQENWHEGK	SAGVDDQENWHEGK	3	SAGVDDQENWHEGK3	23109.8	20980.3	30059.4
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	SAGVDDQENWHEGKENIR	SAGVDDQENWHEGKENIR	4	SAGVDDQENWHEGKENIR4	12549.5	9298.62	11789.5
P02454	P02454	CO1A1_RAT	Col1a1	Collagen alpha-1(I) chain	1	SAGVSVPGPMGPSGPR	SAGVSVPGPMGPSGPR	2	SAGVSVPGPMGPSGPR2	13781.7	12893.9	
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	SAGWIIPIGLLFCNLPEPR	SAGWIIPIGLLFC(UniMod:4)NLPEPR	3	SAGWIIPIGLLFC(UniMod:4)NLPEPR3		11303	14574.3
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	SAGYLDDVTLQSAR	SAGYLDDVTLQSAR	2	SAGYLDDVTLQSAR2	171779	159527	179946
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	SAGYLDDVTLQSAR	SAGYLDDVTLQSAR	3	SAGYLDDVTLQSAR3		7186.64	
Q07984	Q07984	SSRD_RAT	Ssr4	Translocon-associated protein subunit delta	1	SAHAGTYEVR	SAHAGTYEVR	2	SAHAGTYEVR2		61298.7	
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	SAHALVGLLNDLFGR	SAHALVGLLNDLFGR	2	SAHALVGLLNDLFGR2	3607.16	6418.41	3886.86
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	SAHALVGLLNDLFGR	SAHALVGLLNDLFGR	3	SAHALVGLLNDLFGR3	13282.3	15788	9815
D3ZZ26	D3ZZ26	D3ZZ26_RAT	Ppp1r3d	Protein phosphatase 1, regulatory subunit 3D	1	SAHEAVAR	SAHEAVAR	2	SAHEAVAR2			33155.4
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	SAHFSTLAIK	SAHFSTLAIK	2	SAHFSTLAIK2	5121.39		
P11980	A0A8I6AKN1;M0RD14;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	SAHQVAR	SAHQVAR	2	SAHQVAR2			11298.9
P01048	P08932;A0A0G2KA54;P01048	KNT1_RAT	Map1	T-kininogen 1	0	SAHSQVVAGMNYK	SAHSQVVAGMNYK	2	SAHSQVVAGMNYK2	96562.6	87110.3	64655.9
P01048	P08932;A0A0G2KA54;P01048	KNT1_RAT	Map1	T-kininogen 1	0	SAHSQVVAGMNYK	SAHSQVVAGMNYK	3	SAHSQVVAGMNYK3	1.0235e+06	995395	836208
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	SAHVHMR	SAHVHMR	1	SAHVHMR1			26168.6
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	SAICIQSWWR	SAIC(UniMod:4)IQSWWR	2	SAIC(UniMod:4)IQSWWR2	81246.5	82495.9	76849.2
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	SAIDISILQR	SAIDISILQR	2	SAIDISILQR2	11112.7	6749.69	10089.1
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	SAIFSITYPSQDVFLVIK	SAIFSITYPSQDVFLVIK	3	SAIFSITYPSQDVFLVIK3	3783.21		
P62815	P62815;D3ZZS8	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	0	SAIGEGMTR	SAIGEGMTR	2	SAIGEGMTR2	113669	98538.9	101663
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	SAIIETYVMDSR	SAIIETYVMDSR	2	SAIIETYVMDSR2	24799.2	28261.3	19352
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	SAILEASPK	SAILEASPK	2	SAILEASPK2	83916.2	91651.5	86474
D3ZSQ1	D3ZSQ1	D3ZSQ1_RAT	Pcnx3	Pecanex-like protein	1	SAILSNTPSLLALR	SAILSNTPSLLALR	2	SAILSNTPSLLALR2		2763.95	3380.29
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	SAILTSMK	SAILTSMK	2	SAILTSMK2	6454.54	14241.4	5278.59
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	SAILYFPK	SAILYFPK	1	SAILYFPK1	170315	165160	160706
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	SAILYFPK	SAILYFPK	2	SAILYFPK2	6.53454e+06	6.69445e+06	6.92175e+06
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	SAILYVK	SAILYVK	1	SAILYVK1	16908.2	12933.8	12754.2
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	SAILYVK	SAILYVK	2	SAILYVK2	634707	608880	697595
P62902	P62902;D3ZDE9;A0A0G2K7E3;D3ZVY6;D3ZX87;D3ZKU5;D3ZVF5	RL31_RAT	Rpl31	Large ribosomal subunit protein eL31	0	SAINEVVTR	SAINEVVTR	2	SAINEVVTR2	21580.1	25183.5	20881.5
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	SAINSPMAPALVDIHPEDTQLEENEER	SAINSPMAPALVDIHPEDTQLEENEER	4	SAINSPMAPALVDIHPEDTQLEENEER4	17478.7	10015.4	20798.6
Q641Z8	Q641Z8	PEF1_RAT	Pef1	Peflin	1	SAIPAMQLDCFIK	SAIPAMQLDC(UniMod:4)FIK	2	SAIPAMQLDC(UniMod:4)FIK2	24527.7	28153.9	31001.1
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	SAIPHPLIMGVIR	SAIPHPLIMGVIR	2	SAIPHPLIMGVIR2	24080	21709.5	9064.94
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	SAIPHPLIMGVIR	SAIPHPLIMGVIR	3	SAIPHPLIMGVIR3	102459	119378	96919
P29315	P29315	RINI_RAT	Rnh1	Ribonuclease inhibitor	1	SAIQANPALTELSLR	SAIQANPALTELSLR	2	SAIQANPALTELSLR2	42517.2	58432.2	48282.7
P29315	P29315	RINI_RAT	Rnh1	Ribonuclease inhibitor	1	SAIQANPALTELSLR	SAIQANPALTELSLR	3	SAIQANPALTELSLR3	7010.7	6236.8	14046
F1LW77	F1LW77	F1LW77_RAT	Rab33b	RAB33B, member RAS oncogene family	1	SAIQVPTDLAQK	SAIQVPTDLAQK	2	SAIQVPTDLAQK2	31796.6	38054	41269.4
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	SAITPGGLR	SAITPGGLR	2	SAITPGGLR2	160832	160094	140186
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	SAIVHLINYQDDAELATR	SAIVHLINYQDDAELATR	3	SAIVHLINYQDDAELATR3	19480.5	15814.3	17847.1
Q6AY30	Q6AY30	SCPDL_RAT	Sccpdh	Saccharopine dehydrogenase-like oxidoreductase	1	SAIYGFGDK	SAIYGFGDK	2	SAIYGFGDK2	142309	126439	114400
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	SAIYQLEEEYENLLK	SAIYQLEEEYENLLK	2	SAIYQLEEEYENLLK2	11291.1	5014.11	18558.2
P15684	P15684	AMPN_RAT	Anpep	Aminopeptidase N	1	SALACSNEVWILNR	SALAC(UniMod:4)SNEVWILNR	2	SALAC(UniMod:4)SNEVWILNR2	8747.48	15557.9	8882.85
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	SALADVVR	SALADVVR	2	SALADVVR2	565885	565233	543193
F1LTT7	F1LTT7	F1LTT7_RAT	Dennd4b	DENN domain containing 4B	1	SALAGAGGCK	SALAGAGGC(UniMod:4)K	2	SALAGAGGC(UniMod:4)K2		7587.19	
P21670	P21670	PSA4_RAT	Psma4	Proteasome subunit alpha type-4	1	SALALAVK	SALALAVK	1	SALALAVK1	53446.3	41343.3	26677.3
P21670	P21670	PSA4_RAT	Psma4	Proteasome subunit alpha type-4	1	SALALAVK	SALALAVK	2	SALALAVK2	3.65577e+06	3.7803e+06	4.71687e+06
Q6MGB5	Q6MGB5	DHB8_RAT	Hsd17b8	(3R)-3-hydroxyacyl-CoA dehydrogenase	1	SALALVTGAGSGIGR	SALALVTGAGSGIGR	2	SALALVTGAGSGIGR2	13191.6	12745.9	11166
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	SALANQIDWTEIGVIVK	SALANQIDWTEIGVIVK	2	SALANQIDWTEIGVIVK2	11833.2	7752.74	
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	SALANQIDWTEIGVIVK	SALANQIDWTEIGVIVK	3	SALANQIDWTEIGVIVK3	1271.92	445.89	
Q6J2U6	Q6J2U6	RN114_RAT	Rnf114	E3 ubiquitin-protein ligase RNF114	1	SALAPGVR	SALAPGVR	2	SALAPGVR2	13371.2	15010.7	7875.09
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	SALASVIMGLSPILGK	SALASVIMGLSPILGK	2	SALASVIMGLSPILGK2	27558.5	31144.5	30365.2
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	SALASVIMGLSPILGK	SALASVIMGLSPILGK	3	SALASVIMGLSPILGK3	14174.3	10567.1	13789.4
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SALDFPIK	SALDFPIK	2	SALDFPIK2	28794.6	36784.6	29892.7
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SALDFPIKPWIQVDMEK	SALDFPIKPWIQVDMEK	3	SALDFPIKPWIQVDMEK3	533599	434302	351794
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SALDFPIKPWIQVDMEKEVVVTGIQTQGAK	SALDFPIKPWIQVDMEKEVVVTGIQTQGAK	4	SALDFPIKPWIQVDMEKEVVVTGIQTQGAK4	776598	933847	717927
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	SALDNGPQIAYVR	SALDNGPQIAYVR	2	SALDNGPQIAYVR2	10434.5	5644.52	8816.39
P30427	P30427	PLEC_RAT	Plec	Plectin	1	SALDQYR	SALDQYR	2	SALDQYR2	19377.7	11491.4	
Q810F4	Q810F4	FAM3C_RAT	Fam3c	Protein FAM3C	1	SALDSAIR	SALDSAIR	2	SALDSAIR2	28390	23183.1	21857.1
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	SALDVASEQR	SALDVASEQR	2	SALDVASEQR2	15919.9	16680.1	13088
P12711	P12711	ADHX_RAT	Adh5	Alcohol dehydrogenase class-3	1	SALEAAHK	SALEAAHK	2	SALEAAHK2			33628.6
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	SALEAESESLDSYTADSDSTSR	SALEAESESLDSYTADSDSTSR	3	SALEAESESLDSYTADSDSTSR3	37306.7	32215.8	37191.9
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	SALEAESESLDSYTADSDSTSRR	SALEAESESLDSYTADSDSTSRR	3	SALEAESESLDSYTADSDSTSRR3	83067.1	61673.6	75515.1
Q9R1J4	Q9R1J4	MYOC_RAT	Myoc	Myocilin	1	SALEEEK	SALEEEK	2	SALEEEK2		2212.26	10510.9
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	SALELFFIDQSNYFLNFPHK	SALELFFIDQSNYFLNFPHK	3	SALELFFIDQSNYFLNFPHK3	7388.28	9871.43	6267.1
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	SALEVPR	SALEVPR	2	SALEVPR2	32699.7	34533	47006
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	SALFAQINQGESITHALK	SALFAQINQGESITHALK	2	SALFAQINQGESITHALK2	40913.1	17808	27533.5
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	SALFAQINQGESITHALK	SALFAQINQGESITHALK	3	SALFAQINQGESITHALK3	1.8346e+06	1.64798e+06	1.85823e+06
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	SALFLLEHQADINVR	SALFLLEHQADINVR	2	SALFLLEHQADINVR2	2315.74	3169.63	2286.78
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	SALFLLEHQADINVR	SALFLLEHQADINVR	3	SALFLLEHQADINVR3	41748.6	39731.6	39992.1
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	SALFNLALLYSQTAK	SALFNLALLYSQTAK	2	SALFNLALLYSQTAK2	18012.3	10105.3	14957.1
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	SALFNLALLYSQTAK	SALFNLALLYSQTAK	3	SALFNLALLYSQTAK3		5194.06	9000.09
Q6AYB4	Q6AYB4	HSP7E_RAT	Hspa14	Heat shock 70 kDa protein 14	1	SALGEAAGAAGFNVLR	SALGEAAGAAGFNVLR	2	SALGEAAGAAGFNVLR2		2437.01	
Q6U6G5	Q6U6G5	ZC3HF_RAT	Zc3h15	Zinc finger CCCH domain-containing protein 15	1	SALGPNVTK	SALGPNVTK	2	SALGPNVTK2	37135.3	37345.5	41661.7
A0A8I5ZUT2	A0A8I5ZUT2	A0A8I5ZUT2_RAT	Irgq	Immunity-related GTPase Q	1	SALIAALCGK	SALIAALC(UniMod:4)GK	2	SALIAALC(UniMod:4)GK2	10888	8133.02	5745
D4ADD7	D4ADD7	D4ADD7_RAT	Glrx5	Glutaredoxin 5	1	SALIDEKDQDSK	SALIDEKDQDSK	2	SALIDEKDQDSK2	17494.6	13602	16179
D4ADD7	D4ADD7	D4ADD7_RAT	Glrx5	Glutaredoxin 5	1	SALIDEKDQDSK	SALIDEKDQDSK	3	SALIDEKDQDSK3	129631	105667	115688
F1LVL5	F1LVL5;Q7TP36	F1LVL5_RAT	Shroom4	Shroom family member 4	0	SALIIEQR	SALIIEQR	2	SALIIEQR2	46785.4	54294.4	48164.6
D3ZS97	D3ZS97	D3ZS97_RAT	Cd226	CD226 molecule	1	SALIIPYAMAADSGLYR	SALIIPYAMAADSGLYR	2	SALIIPYAMAADSGLYR2	78607.4	128589	124293
D3ZS97	D3ZS97	D3ZS97_RAT	Cd226	CD226 molecule	1	SALIIPYAMAADSGLYR	SALIIPYAMAADSGLYR	3	SALIIPYAMAADSGLYR3	26851.7	35660	34193.7
Q3B8P0	Q3B8P0	PARL_RAT	Parl	Presenilin-associated rhomboid-like protein, mitochondrial	1	SALIPPLEETVFYPSPYPVR	SALIPPLEETVFYPSPYPVR	3	SALIPPLEETVFYPSPYPVR3		2513.73	
Q9ET64	Q9ET64	NSMA_RAT	Smpd2	Sphingomyelin phosphodiesterase 2	1	SALISALR	SALISALR	2	SALISALR2	62411.4	61467.9	71294.4
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	SALKELATVLSDQPGLLGPK	SALKELATVLSDQPGLLGPK	3	SALKELATVLSDQPGLLGPK3	7959.81	2554.47	6255.27
Q9QWG5	Q9QWG5	INP4B_RAT	Inpp4b	Type II inositol 3,4-bisphosphate 4-phosphatase	1	SALLALYTAR	SALLALYTAR	2	SALLALYTAR2	23428	13835.2	17369.6
Q5PQR3	Q5PQR3	BTBD9_RAT	Btbd9	BTB/POZ domain-containing protein 9	1	SALLDGDTQNYDLDHGFSR	SALLDGDTQNYDLDHGFSR	3	SALLDGDTQNYDLDHGFSR3	9492.81		
A0A8I5ZVX1	A0A8I5ZVX1	A0A8I5ZVX1_RAT	Ppfibp2	PPFIA binding protein 2	1	SALLDHVWVTR	SALLDHVWVTR	3	SALLDHVWVTR3	20390.4	24608.1	26077.9
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	SALLDSIQNLQVALTSK	SALLDSIQNLQVALTSK	2	SALLDSIQNLQVALTSK2	3609.92	5343.86	4519
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	SALLHWKPPHKPVDK	SALLHWKPPHKPVDK	3	SALLHWKPPHKPVDK3	20530.8	21335.4	15375.7
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	SALLHWKPPHKPVDK	SALLHWKPPHKPVDK	4	SALLHWKPPHKPVDK4	115660	158863	122543
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	SALLLEQAAHCFINMK	SALLLEQAAHC(UniMod:4)FINMK	3	SALLLEQAAHC(UniMod:4)FINMK3	15965.8	22656.9	14006.6
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	SALLPNPLELQLPR	SALLPNPLELQLPR	2	SALLPNPLELQLPR2	54391.6	49653.3	62917.3
Q56AP7	Q56AP7	CRBN_RAT	Crbn	Protein cereblon	1	SALLPTIPETEDEISPDK	SALLPTIPETEDEISPDK	2	SALLPTIPETEDEISPDK2	23898	23494.1	29861.8
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	SALLQMVEELR	SALLQMVEELR	2	SALLQMVEELR2	10552	10051.5	9358.6
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	SALLQMVEELRR	SALLQMVEELRR	3	SALLQMVEELRR3	72576.2	71564.7	77461
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	SALLSPEAPPEGGGSFLGK	SALLSPEAPPEGGGSFLGK	2	SALLSPEAPPEGGGSFLGK2	514568	457036	561066
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	SALLSPEAPPEGGGSFLGK	SALLSPEAPPEGGGSFLGK	3	SALLSPEAPPEGGGSFLGK3	93762.7	77861.4	91350.7
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	SALLSPEEPPASHR	SALLSPEEPPASHR	3	SALLSPEEPPASHR3	24371.2	37980.6	36874.2
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	SALMPAQLFFK	SALMPAQLFFK	2	SALMPAQLFFK2	30811.9	29596	29097
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	SALMQQPK	SALMQQPK	2	SALMQQPK2	151889	131570	139941
A0A140UHY1	A0A140UHY1	A0A140UHY1_RAT	Ttc4	Tetratricopeptide repeat domain 4	1	SALNDVLAAK	SALNDVLAAK	2	SALNDVLAAK2	4494.46	6452.62	7431.99
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	SALNEEDMEK	SALNEEDMEK	2	SALNEEDMEK2	4838.98	4171.26	2567.88
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	SALNEVHLVVMR	SALNEVHLVVMR	2	SALNEVHLVVMR2	1440.85	966.878	2426.46
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	SALNEVHLVVMR	SALNEVHLVVMR	3	SALNEVHLVVMR3	39241.2	38557.8	38840.7
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	SALNSCDPWVQAK	SALNSC(UniMod:4)DPWVQAK	2	SALNSC(UniMod:4)DPWVQAK2	5767.2	3780.41	3287.26
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	SALPAQSAATLPAR	SALPAQSAATLPAR	2	SALPAQSAATLPAR2	1.78055e+06	1.78095e+06	1.83936e+06
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	SALPAQSAATLPAR	SALPAQSAATLPAR	3	SALPAQSAATLPAR3	57588.4	73291.5	70180.3
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	SALPFNR	SALPFNR	2	SALPFNR2	10644.3	25859.8	16137.3
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	SALQVEQK	SALQVEQK	2	SALQVEQK2	13818.4	13765.3	9500.67
Q07936	Q07936	ANXA2_RAT	Anxa2	Annexin A2	1	SALSGHLETVMLGLLK	SALSGHLETVMLGLLK	3	SALSGHLETVMLGLLK3	6655.99	10007.3	2191.52
A0A0U1RS36	A0A0U1RS36	A0A0U1RS36_RAT	Marchf8	Membrane associated ring-CH-type finger 8	1	SALTEPTLENK	SALTEPTLENK	2	SALTEPTLENK2	10420.3	7762.58	5289.43
P08644	Q04970;P08644;P20171	RASK_RAT	Kras	GTPase KRas	0	SALTIQLIQNHFVDEYDPTIEDSYRK	SALTIQLIQNHFVDEYDPTIEDSYRK	4	SALTIQLIQNHFVDEYDPTIEDSYRK4	89523	81748	86041.1
P63322	P63322;P36860	RALA_RAT	Rala	Ras-related protein Ral-A	0	SALTLQFMYDEFVEDYEPTK	SALTLQFMYDEFVEDYEPTK	3	SALTLQFMYDEFVEDYEPTK3	24806.9	16235.7	15161
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	SALTLVMGALDNPNPILR	SALTLVMGALDNPNPILR	2	SALTLVMGALDNPNPILR2	3460.18	1992.93	
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	SALTLVMGALDNPNPILR	SALTLVMGALDNPNPILR	3	SALTLVMGALDNPNPILR3	3343.74		1310.91
Q62636	Q62636;P62836	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	0	SALTVQFVQGIFVEK	SALTVQFVQGIFVEK	2	SALTVQFVQGIFVEK2	451836	417904	482161
Q62636	Q62636;P62836	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	0	SALTVQFVQGIFVEK	SALTVQFVQGIFVEK	3	SALTVQFVQGIFVEK3	354070	300451	340244
Q62636	Q62636;P62836	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	0	SALTVQFVQGIFVEKYDPTIEDSYR	SALTVQFVQGIFVEKYDPTIEDSYR	3	SALTVQFVQGIFVEKYDPTIEDSYR3	13043.1	10162.9	9590.64
Q62636	Q62636;P62836	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	0	SALTVQFVQGIFVEKYDPTIEDSYRK	SALTVQFVQGIFVEKYDPTIEDSYRK	4	SALTVQFVQGIFVEKYDPTIEDSYRK4	46314.1	21988.8	17956.3
P61227	P61227	RAP2B_RAT	Rap2b	Ras-related protein Rap-2b	1	SALTVQFVTGSFIEK	SALTVQFVTGSFIEK	2	SALTVQFVTGSFIEK2	77143.6	71250.4	74949.7
P61227	P61227	RAP2B_RAT	Rap2b	Ras-related protein Rap-2b	1	SALTVQFVTGSFIEK	SALTVQFVTGSFIEK	3	SALTVQFVTGSFIEK3	31885.8	22286.6	35395.1
D3ZK56	A0A0G2JTW1;D3ZK56	D3ZK56_RAT	Rap2c	Ras-related protein Rap-2	0	SALTVQFVTGTFIEK	SALTVQFVTGTFIEK	2	SALTVQFVTGTFIEK2	16080	6601.97	20568.2
P80385	P80385	AAKG1_RAT	Prkag1	5'-AMP-activated protein kinase subunit gamma-1	1	SALVQIYELEEHK	SALVQIYELEEHK	3	SALVQIYELEEHK3	16356.9	6022.19	13852.7
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	SALYYVDLSGGK	SALYYVDLSGGK	2	SALYYVDLSGGK2	120789	120574	133947
D3ZUZ4	D3ZUZ4	D3ZUZ4_RAT	Fam20b	FAM20B, glycosaminoglycan xylosylkinase	1	SAMAHDPIAPVLSDPHLDTVDQR	SAMAHDPIAPVLSDPHLDTVDQR	4	SAMAHDPIAPVLSDPHLDTVDQR4		7216.33	7601.51
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	SAMETVLQYCR	SAMETVLQYC(UniMod:4)R	2	SAMETVLQYC(UniMod:4)R2	30341.4	30997.9	29436.8
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	SAMGMFVDAFSK	SAMGMFVDAFSK	2	SAMGMFVDAFSK2	12852.1	15018.9	11175.4
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	SAMILQR	SAMILQR	2	SAMILQR2	10964.7	37760.4	24485.8
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	SAMMYIQELR	SAMMYIQELR	2	SAMMYIQELR2	136837	149787	152184
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	SAMPFTASPAPGTR	SAMPFTASPAPGTR	2	SAMPFTASPAPGTR2	474993	452784	493863
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	SAMPFTASPAPGTR	SAMPFTASPAPGTR	3	SAMPFTASPAPGTR3	4239.34	5065.1	7259.86
P50609	P50609	FMOD_RAT	Fmod	Fibromodulin	1	SAMPVDAPLCLR	SAMPVDAPLC(UniMod:4)LR	2	SAMPVDAPLC(UniMod:4)LR2	49642.5	46310	35613.5
D3ZCT7	D3ZCT7	D3ZCT7_RAT	Sec23b	Protein transport protein SEC23	1	SAMPVQQVRPGQPQEQSAVSSR	SAMPVQQVRPGQPQEQSAVSSR	3	SAMPVQQVRPGQPQEQSAVSSR3	17465.4	12529.4	15710.9
A0A8I6AL43	A0A8I6AL43	A0A8I6AL43_RAT	Ate1	Arginyl-tRNA--protein transferase 1	1	SAMPYGVYK	SAMPYGVYK	2	SAMPYGVYK2	12470.6	6843.65	
Q8R4E1	Q8R4E1	TIP_RAT	Itfg1	T-cell immunomodulatory protein	1	SANFLDHLFVGIPR	SANFLDHLFVGIPR	3	SANFLDHLFVGIPR3		5440.32	
Q6J2U6	Q6J2U6	RN114_RAT	Rnf114	E3 ubiquitin-protein ligase RNF114	1	SANFMEHIQR	SANFMEHIQR	3	SANFMEHIQR3	5617.29	4906.33	3447.87
Q62844	Q62844	FYN_RAT	Fyn	Tyrosine-protein kinase Fyn	1	SANILVGNGLICK	SANILVGNGLIC(UniMod:4)K	2	SANILVGNGLIC(UniMod:4)K2	44004.4	43058.2	46072.4
F1LUF8	F1LUF8	F1LUF8_RAT	Bnc1	Basonuclin 1	1	SANLPTPVDK	SANLPTPVDK	2	SANLPTPVDK2	6134.94		
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	SANLVAATLGAILNR	SANLVAATLGAILNR	2	SANLVAATLGAILNR2	13920.5	13544.8	12063.4
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	SANLVAATLGAILNR	SANLVAATLGAILNR	3	SANLVAATLGAILNR3	42858.5	39650.1	46080
Q5U2R0	Q5U2R0	MAT2B_RAT	Mat2b	Methionine adenosyltransferase 2 subunit beta	1	SANMDHWQQR	SANMDHWQQR	2	SANMDHWQQR2	1665.33	1657.77	
Q5U2R0	Q5U2R0	MAT2B_RAT	Mat2b	Methionine adenosyltransferase 2 subunit beta	1	SANMDHWQQR	SANMDHWQQR	3	SANMDHWQQR3	20760.3	16798	15425.9
Q6P4Z9	Q6P4Z9	CSN8_RAT	Cops8	COP9 signalosome complex subunit 8	1	SANSELGGIWSVGQR	SANSELGGIWSVGQR	2	SANSELGGIWSVGQR2	96886.2	118866	99933.3
Q6P4Z9	Q6P4Z9	CSN8_RAT	Cops8	COP9 signalosome complex subunit 8	1	SANSELGGIWSVGQR	SANSELGGIWSVGQR	3	SANSELGGIWSVGQR3	16661.8	11473.4	18731.3
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	SANSWLAEK	SANSWLAEK	2	SANSWLAEK2	151008	164942	173415
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	SANTQSISR	SANTQSISR	2	SANTQSISR2	48500.2		78114
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	SANTQVVR	SANTQVVR	2	SANTQVVR2	169166	176022	174175
A0A8I5ZPY8	A0A8I6APG8;F1M7Z4;D3ZV29;A0A8I5ZPY8;F1M7T1;D3ZQH7	A0A8I5ZPY8_RAT	Ndufb4	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4	0	SANVYPNFRPTPK	SANVYPNFRPTPK	2	SANVYPNFRPTPK2	8021.38	4987.46	
A0A8I5ZPY8	A0A8I6APG8;F1M7Z4;D3ZV29;A0A8I5ZPY8;F1M7T1;D3ZQH7	A0A8I5ZPY8_RAT	Ndufb4	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4	0	SANVYPNFRPTPK	SANVYPNFRPTPK	3	SANVYPNFRPTPK3	106554	144789	145151
Q02353	Q02353	NDST1_RAT	Ndst1	Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1	1	SANYFDSEVAPR	SANYFDSEVAPR	2	SANYFDSEVAPR2	3149.47	2057.5	4542.51
Q9QZK5	Q9QZK5	HTRA1_RAT	Htra1	Serine protease HTRA1	1	SAPAATVCPEHCDPTR	SAPAATVC(UniMod:4)PEHC(UniMod:4)DPTR	3	SAPAATVC(UniMod:4)PEHC(UniMod:4)DPTR3	8147.67	13696.7	14232.1
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	SAPADGADLSAHLWAR	SAPADGADLSAHLWAR	2	SAPADGADLSAHLWAR2	10094.2	12672.4	
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	SAPADGADLSAHLWAR	SAPADGADLSAHLWAR	3	SAPADGADLSAHLWAR3	27083.6	17027.1	21081.2
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	SAPAEEGQPASSEK	SAPAEEGQPASSEK	2	SAPAEEGQPASSEK2	23356.5		34402.2
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	SAPCGSLAFSGDR	SAPC(UniMod:4)GSLAFSGDR	2	SAPC(UniMod:4)GSLAFSGDR2	14407.4	16995.1	21615.7
Q6IN36	Q6IN36	WIPF1_RAT	Wipf1	WAS/WASL-interacting protein family member 1	1	SAPILDKPK	SAPILDKPK	2	SAPILDKPK2	272762	252039	246885
O88377	O88377	PI42B_RAT	Pip4k2b	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta	1	SAPINSDSQGR	SAPINSDSQGR	2	SAPINSDSQGR2	57784.2	74079.4	75561.4
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	SAPLILAR	SAPLILAR	2	SAPLILAR2	22090.7	35629.3	24136.9
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	SAPLLLPGR	SAPLLLPGR	2	SAPLLLPGR2	41307	36722.8	39919
E9PST5	E9PST5	E9PST5_RAT	Acin1	Apoptotic chromatin condensation inducer 1	1	SAPLLPLTR	SAPLLPLTR	2	SAPLLPLTR2	30565.1	23165.5	24482.6
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	SAPLPNDSQAR	SAPLPNDSQAR	2	SAPLPNDSQAR2	483622	653968	558736
D3ZLM5	D3ZLM5	D3ZLM5_RAT	Nhlrc2	NHL repeat containing 2	1	SAPNISLPPVTVHPGQALQLGLR	SAPNISLPPVTVHPGQALQLGLR	3	SAPNISLPPVTVHPGQALQLGLR3	11778.6	14185.6	16554.7
A0A0G2K543	A0A0G2K543	A0A0G2K543_RAT	C2cd5	C2 calcium-dependent domain containing 5	1	SAPPCASPTVGVVK	SAPPC(UniMod:4)ASPTVGVVK	2	SAPPC(UniMod:4)ASPTVGVVK2	45153.2	36438.1	
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	SAPSAPAMQSFHHLEWTCWHR	SAPSAPAMQSFHHLEWTC(UniMod:4)WHR	4	SAPSAPAMQSFHHLEWTC(UniMod:4)WHR4	18043.7	25434.8	18566.1
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	SAPSDSLTYK	SAPSDSLTYK	2	SAPSDSLTYK2	37057.3	26590.8	36359.5
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	SAPTSPTATNISSK	SAPTSPTATNISSK	2	SAPTSPTATNISSK2	28261.8	21345.6	30992.4
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	SAPTTEETR	SAPTTEETR	2	SAPTTEETR2			118801
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	SAPTTEETRR	SAPTTEETRR	2	SAPTTEETRR2			18583.7
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	SAPTTEETRR	SAPTTEETRR	3	SAPTTEETRR3			413756
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	SAPVTALEPGR	SAPVTALEPGR	2	SAPVTALEPGR2	2921.57	8107.67	1964.27
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	SAPVTALEPGRK	SAPVTALEPGRK	3	SAPVTALEPGRK3	9968.34	10982.8	5813.18
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	SAPYEFPEESPIEQLEER	SAPYEFPEESPIEQLEER	3	SAPYEFPEESPIEQLEER3	52385.9	50430.4	48241.3
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	SAQALQQLEDELQQK	SAQALQQLEDELQQK	2	SAQALQQLEDELQQK2	16262.6	13640.6	17131
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	SAQALQQLEDELQQK	SAQALQQLEDELQQK	3	SAQALQQLEDELQQK3	10657.6	9220.76	8086.7
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	SAQASSSEKEPCATLTIPSIR	SAQASSSEKEPC(UniMod:4)ATLTIPSIR	3	SAQASSSEKEPC(UniMod:4)ATLTIPSIR3	21946.4	26637.8	22628.4
D3ZE20	D3ZE20	D3ZE20_RAT	Nfatc1	Nuclear factor of activated T-cells 1	1	SAQELPLVEK	SAQELPLVEK	2	SAQELPLVEK2	16534.9	10426	14019.9
D3ZE72	D3ZE72	D3ZE72_RAT	Metap1	Methionine aminopeptidase	1	SAQFEHTLLVTDTGCEILTR	SAQFEHTLLVTDTGC(UniMod:4)EILTR	3	SAQFEHTLLVTDTGC(UniMod:4)EILTR3	2608.76		1830.58
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	SAQFLYPAVQLQR	SAQFLYPAVQLQR	2	SAQFLYPAVQLQR2	15740.5	23591.2	16617.4
Q9ER31	Q9ER31	ENTP6_RAT	Entpd6	Ectonucleoside triphosphate diphosphohydrolase 6	1	SAQGIQELLNVAK	SAQGIQELLNVAK	2	SAQGIQELLNVAK2	3970.29	4303.01	5588.33
Q2THW7	Q2THW7	ZDHC5_RAT	Zdhhc5	Palmitoyltransferase ZDHHC5	1	SAQGTGFELGQLQSIR	SAQGTGFELGQLQSIR	2	SAQGTGFELGQLQSIR2	6310.31	4600.31	2225.71
A0A0G2JUC9	A0A0G2JUC9	A0A0G2JUC9_RAT	Herc2	HECT-type E3 ubiquitin transferase	1	SAQGTSAPLLPLLHR	SAQGTSAPLLPLLHR	3	SAQGTSAPLLPLLHR3	6855.27	5242.86	6334.06
B1WBT4	B1WBT4	B1WBT4_RAT	Srpk2	SRSF protein kinase 2	1	SAQHYTETALDEIK	SAQHYTETALDEIK	2	SAQHYTETALDEIK2	3257.95	1344.07	2247.99
B1WBT4	B1WBT4	B1WBT4_RAT	Srpk2	SRSF protein kinase 2	1	SAQHYTETALDEIK	SAQHYTETALDEIK	3	SAQHYTETALDEIK3	7686.34	11890.9	13732
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	SAQIMESQYGHLFDK	SAQIMESQYGHLFDK	2	SAQIMESQYGHLFDK2	7743.89	6119.78	7114.57
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	SAQIMESQYGHLFDK	SAQIMESQYGHLFDK	3	SAQIMESQYGHLFDK3	20568.5	20209	25777.1
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	SAQPASAEPR	SAQPASAEPR	2	SAQPASAEPR2	455939		1.27425e+06
Q5XI07	Q5XI07	LPP_RAT	Lpp	Lipoma-preferred partner homolog	1	SAQPSTHYMTGSSSGQMYGPGSR	SAQPSTHYMTGSSSGQMYGPGSR	3	SAQPSTHYMTGSSSGQMYGPGSR3	22676.3	24287.5	26139.8
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	SAQSQTGLETGPESALCGDR	SAQSQTGLETGPESALC(UniMod:4)GDR	3	SAQSQTGLETGPESALC(UniMod:4)GDR3	3932.39	2508.74	2711.9
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	SAQSQTGLETGPESALCGDRK	SAQSQTGLETGPESALC(UniMod:4)GDRK	3	SAQSQTGLETGPESALC(UniMod:4)GDRK3	179360	153256	206119
D4ACK1	D4ACK1	D4ACK1_RAT	Nup214	Nucleoporin 214	1	SAQTAPSSAPSTGQK	SAQTAPSSAPSTGQK	2	SAQTAPSSAPSTGQK2	5965.19		2091.23
D3ZE26	D3ZE26	D3ZE26_RAT	Tmcc2	Transmembrane and coiled-coil domain family 2	1	SAQTIAQLHK	SAQTIAQLHK	2	SAQTIAQLHK2	8517.01	8106.71	10606.1
D3ZH14	D3ZH14	D3ZH14_RAT	Tmcc1	Transmembrane and coiled-coil domain family 1	1	SAQTILQLQK	SAQTILQLQK	2	SAQTILQLQK2	4222.38	5357.64	4888.48
M0R8J3	M0R8J3	M0R8J3_RAT	Jmy	Junction mediating and regulatory protein, p53 cofactor	1	SASAPTAHLFDSSQLVSAR	SASAPTAHLFDSSQLVSAR	3	SASAPTAHLFDSSQLVSAR3	13975.4	6600.14	15308.4
A0A0U1RS29	A0A0U1RS29	A0A0U1RS29_RAT	Rgl2	Ral guanine nucleotide dissociation stimulator-like 2	1	SASCGSPLSGGTGEGASR	SASC(UniMod:4)GSPLSGGTGEGASR	2	SASC(UniMod:4)GSPLSGGTGEGASR2	6644.84	5127.6	5595.41
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	SASDLQEVR	SASDLQEVR	2	SASDLQEVR2	53857.3	56231.9	46429.8
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	SASFAGFSSAQSR	SASFAGFSSAQSR	2	SASFAGFSSAQSR2	108742	69595.6	76578.9
Q9QZ81	Q9QZ81	AGO2_RAT	Ago2	Protein argonaute-2	1	SASFNTDPYVR	SASFNTDPYVR	2	SASFNTDPYVR2		2752.66	4899.51
Q9EQH1	Q9EQH1	GAB2_RAT	Gab2	GRB2-associated-binding protein 2	1	SASFSQGTR	SASFSQGTR	2	SASFSQGTR2			13890.7
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	SASHSSAATTVLTTQQR	SASHSSAATTVLTTQQR	2	SASHSSAATTVLTTQQR2	444.705	2291.57	
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	SASHSSAATTVLTTQQR	SASHSSAATTVLTTQQR	3	SASHSSAATTVLTTQQR3	5312.39	9483.14	6598.38
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	SASIKPHEAPSPSAVNPDSWNAPVLMTLTK	SASIKPHEAPSPSAVNPDSWNAPVLMTLTK	4	SASIKPHEAPSPSAVNPDSWNAPVLMTLTK4	235154	170264	229832
P58405	P58405	STRN3_RAT	Strn3	Striatin-3	1	SASLDVEPIYTFR	SASLDVEPIYTFR	2	SASLDVEPIYTFR2	47398.4	60076.6	56549.8
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	SASLVLPSYQHSDLSK	SASLVLPSYQHSDLSK	3	SASLVLPSYQHSDLSK3	45887.5	55022.1	54041.3
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	SASLVVPNDIPK	SASLVVPNDIPK	2	SASLVVPNDIPK2	42097	48158.5	58016.6
Q63072	Q63072	BST1_RAT	Bst1	ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 2	1	SASMQYSR	SASMQYSR	2	SASMQYSR2	20962.2	25056.8	21988.5
B2RYP8	B2RYP8	B2RYP8_RAT	Tubgcp2	Gamma-tubulin complex component	1	SASNIDDVLGHHTSFLDNCLK	SASNIDDVLGHHTSFLDNC(UniMod:4)LK	4	SASNIDDVLGHHTSFLDNC(UniMod:4)LK4	3261.26		6970.23
D3ZYS7	D3ZYS7	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	1	SASPAPADVAPAQEDLR	SASPAPADVAPAQEDLR	2	SASPAPADVAPAQEDLR2	99873.7	83689.2	84937.2
D3ZYS7	D3ZYS7	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	1	SASPAPADVAPAQEDLR	SASPAPADVAPAQEDLR	3	SASPAPADVAPAQEDLR3	13075.6	10396.6	11797.6
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	SASPDDIK	SASPDDIK	2	SASPDDIK2	73856.8	35726.4	54201.5
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	SASPDDIKK	SASPDDIKK	2	SASPDDIKK2	145037		73198.9
D4AE80	D4AE80	D4AE80_RAT	Dcp1a	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	SASPYHGFTIVNR	SASPYHGFTIVNR	3	SASPYHGFTIVNR3	9721.31	8666.87	8360.65
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	SASRPDVGTSSPEPTPLDQEMFNSFHFWR	SASRPDVGTSSPEPTPLDQEMFNSFHFWR	4	SASRPDVGTSSPEPTPLDQEMFNSFHFWR4	31577	40999.7	27699.8
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	SASSDTSEELNAQDSPK	SASSDTSEELNAQDSPK	2	SASSDTSEELNAQDSPK2	22516.8	23885.1	11549
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	SASSDTSEELNAQDSPK	SASSDTSEELNAQDSPK	3	SASSDTSEELNAQDSPK3	3618.99	4691.56	4602.51
B0K014	B0K014	B0K014_RAT	Dtd1	D-aminoacyl-tRNA deacylase	1	SASSGAEGDVSSEREP	SASSGAEGDVSSEREP	2	SASSGAEGDVSSEREP2	1396.53	2662.82	3503.05
Q4V794	Q4V794	Q4V794_RAT	Vps37a	VPS37A subunit of ESCRT-I	1	SASSSAAGSPAGLTSLQQQK	SASSSAAGSPAGLTSLQQQK	2	SASSSAAGSPAGLTSLQQQK2	3321.26	2349.97	
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	SASSSVIEK	SASSSVIEK	2	SASSSVIEK2	98601	91070.2	110856
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	SASSSVVDK	SASSSVVDK	1	SASSSVVDK1	6045.24		1573.47
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	SASSSVVDK	SASSSVVDK	2	SASSSVVDK2	114355		143190
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	SASTAGDIACAFRPVK	SASTAGDIAC(UniMod:4)AFRPVK	3	SASTAGDIAC(UniMod:4)AFRPVK3	12642.8	10279.2	
A0A0G2K4E8	A0A0G2K4E8	A0A0G2K4E8_RAT	R3hdm2	R3H domain containing 2	1	SASTDLGTADVVLGR	SASTDLGTADVVLGR	2	SASTDLGTADVVLGR2	6437.61	3767.21	2270.95
Q704S8	Q704S8	CACP_RAT	Crat	Carnitine O-acetyltransferase	1	SASTDSLAFVK	SASTDSLAFVK	2	SASTDSLAFVK2	5591.11	5471.44	9318.86
D3Z8F6	D3Z8F6	D3Z8F6_RAT	Dennd1b	DENN domain containing 1B	1	SASTSDSGFQPATPEASQTHK	SASTSDSGFQPATPEASQTHK	3	SASTSDSGFQPATPEASQTHK3	13134.2	9984.45	20457.6
A0A8I6A263	A0A8I6A263	A0A8I6A263_RAT	Aimp1	Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	1	SASVTTTTMTGGGGEEK	SASVTTTTMTGGGGEEK	2	SASVTTTTMTGGGGEEK2	34807.9	20716.9	11575.3
A0A8I6A263	A0A8I6A263	A0A8I6A263_RAT	Aimp1	Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	1	SASVTTTTMTGGGGEEKK	SASVTTTTMTGGGGEEKK	3	SASVTTTTMTGGGGEEKK3	2642.29	4401.23	
P61805	P61805	DAD1_RAT	Dad1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1	1	SASVVSVISR	SASVVSVISR	2	SASVVSVISR2	71219.9	64873.3	61671.9
Q5FWU3	Q5FWU3	ATG9A_RAT	Atg9a	Autophagy-related protein 9A	1	SASYPCATPR	SASYPC(UniMod:4)ATPR	2	SASYPC(UniMod:4)ATPR2	9217.81	7563.47	7643.47
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	SASYSYLEER	SASYSYLEER	2	SASYSYLEER2	92638.8	81037.9	96986.5
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	SATADLSR	SATADLSR	2	SATADLSR2	30208.2	34693.8	27979
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	SATAHIIVGSSK	SATAHIIVGSSK	2	SATAHIIVGSSK2	11288.9	6263.04	13014.4
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	SATAHIIVGSSK	SATAHIIVGSSK	3	SATAHIIVGSSK3	150978	160000	143485
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	SATCQVTPDR	SATC(UniMod:4)QVTPDR	2	SATC(UniMod:4)QVTPDR2	2679.9		
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	SATDADMANSGWLVVGK	SATDADMANSGWLVVGK	2	SATDADMANSGWLVVGK2	2618.07	7796.43	2931.95
D4A9Z2	D4A9Z2	D4A9Z2_RAT	Top3b	DNA topoisomerase	1	SATEAELGGDAWR	SATEAELGGDAWR	2	SATEAELGGDAWR2	6040.22	3073.06	9233.7
P35248	P35248	SFTPD_RAT	Sftpd	Pulmonary surfactant-associated protein D	1	SATENAAVQQLVTAHSK	SATENAAVQQLVTAHSK	3	SATENAAVQQLVTAHSK3	2215.78	4506.31	
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	SATEQSGTGIR	SATEQSGTGIR	2	SATEQSGTGIR2	121950	114467	
A0A8I5YC01	A0A8I5YC01	A0A8I5YC01_RAT	Gimap1	GTPase, IMAP family member 1	1	SATGNSILGQK	SATGNSILGQK	2	SATGNSILGQK2	4480.86	5590.36	5604.63
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	SATGPFDR	SATGPFDR	2	SATGPFDR2	262250	206659	106261
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	SATGQVQVLGLVHTQK	SATGQVQVLGLVHTQK	2	SATGQVQVLGLVHTQK2	1297.76	1353.79	
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	SATGQVQVLGLVHTQK	SATGQVQVLGLVHTQK	3	SATGQVQVLGLVHTQK3	1.54702e+06	1.78022e+06	1.97576e+06
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	SATISYYQLMHMQTAPLPVNFQMLCESSK	SATISYYQLMHMQTAPLPVNFQMLC(UniMod:4)ESSK	4	SATISYYQLMHMQTAPLPVNFQMLC(UniMod:4)ESSK4	20561.2	21000.4	25143.6
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	SATKPWSPVAK	SATKPWSPVAK	2	SATKPWSPVAK2	18195.6	12285.2	12069.6
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	SATKPWSPVAK	SATKPWSPVAK	3	SATKPWSPVAK3	124019	104660	130464
D3ZMA2	D3ZMA2	D3ZMA2_RAT	Mtmr14	Myotubularin related protein 14	1	SATLAGWGELYGR	SATLAGWGELYGR	2	SATLAGWGELYGR2	25132.6	48102.8	44740.7
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	SATLASIDAELQK	SATLASIDAELQK	2	SATLASIDAELQK2	168262	178164	170463
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	SATLASIDAELQK	SATLASIDAELQK	3	SATLASIDAELQK3	5939.27	5977.65	7827.82
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	SATLFSR	SATLFSR	2	SATLFSR2	53456.6	64507.5	56670.1
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	SATLLQLITK	SATLLQLITK	2	SATLLQLITK2	53444.4	54396.3	59667.3
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	SATLQFRPGYDGK	SATLQFRPGYDGK	3	SATLQFRPGYDGK3		10093	13680.2
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	SATMELEK	SATMELEK	2	SATMELEK2	64743.4	52958.7	57963.6
Q6DGG9	Q6DGG9	CAMLG_RAT	Camlg	Guided entry of tail-anchored proteins factor CAMLG	1	SATPSGLSASQR	SATPSGLSASQR	2	SATPSGLSASQR2	94109.8	78253.1	90935.5
B0BNM1	B0BNM1	NNRE_RAT	Naxe	NAD(P)H-hydrate epimerase	1	SATQFTGR	SATQFTGR	2	SATQFTGR2	33885.9	19519.7	45668.5
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	SATQMFELTR	SATQMFELTR	2	SATQMFELTR2	76503.7	79279.1	92728.1
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	SATQVVSNDENTEL	SATQVVSNDENTEL	2	SATQVVSNDENTEL2	1.33436e+06	1.58644e+06	1.70152e+06
P86411	P86411	RGPA2_RAT	Ralgapa2	Ral GTPase-activating protein subunit alpha-2	1	SATTSGAPGVEK	SATTSGAPGVEK	2	SATTSGAPGVEK2	7165.85	7650.15	8553.31
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	SATTTGSPGTEK	SATTTGSPGTEK	2	SATTTGSPGTEK2			4506.26
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	SATTTPSGSPR	SATTTPSGSPR	2	SATTTPSGSPR2	9001.12		58936.9
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	SATTTVMNPK	SATTTVMNPK	2	SATTTVMNPK2	110414	102057	91161.3
F1LTT7	F1LTT7	F1LTT7_RAT	Dennd4b	DENN domain containing 4B	1	SATVPELWAR	SATVPELWAR	2	SATVPELWAR2	13203.4	15489.4	5751.53
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	SATYVNTEGR	SATYVNTEGR	2	SATYVNTEGR2	99167.6	78435.2	110306
P97523	P97523	MET_RAT	Met	Hepatocyte growth factor receptor	1	SAVCAFPIK	SAVC(UniMod:4)AFPIK	2	SAVC(UniMod:4)AFPIK2	6289.09	8380.81	11108
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	SAVDDCQDSWR	SAVDDC(UniMod:4)QDSWR	2	SAVDDC(UniMod:4)QDSWR2	48638.5	44196.5	55269.4
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	SAVDDCQDSWRR	SAVDDC(UniMod:4)QDSWRR	3	SAVDDC(UniMod:4)QDSWRR3	19817.5	29727	24897.1
Q05754	Q05754	DOPO_RAT	Dbh	Dopamine beta-hydroxylase	1	SAVDDGFLQK	SAVDDGFLQK	2	SAVDDGFLQK2	13822.9	13444.6	15617.8
Q66H86	Q66H86	OLFL1_RAT	Olfml1	Olfactomedin-like protein 1	1	SAVDNLALR	SAVDNLALR	2	SAVDNLALR2	44484.4	47119.1	40552.8
A0A0G2K1D2	A0A0G2K1D2	A0A0G2K1D2_RAT	Rap1gds1	Rap1 GTPase-GDP dissociation stimulator 1	1	SAVDQAGGAQIVIDHLR	SAVDQAGGAQIVIDHLR	3	SAVDQAGGAQIVIDHLR3	6908.5	5649.53	
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	SAVEAER	SAVEAER	2	SAVEAER2			246781
B1H219	B1H219	B1H219_RAT	Dkk3	Dickkopf WNT signaling pathway inhibitor 3	1	SAVEEMEAEEAAAR	SAVEEMEAEEAAAR	2	SAVEEMEAEEAAAR2	758166	773369	861463
B1H219	B1H219	B1H219_RAT	Dkk3	Dickkopf WNT signaling pathway inhibitor 3	1	SAVEEMEAEEAAAR	SAVEEMEAEEAAAR	3	SAVEEMEAEEAAAR3	61967.3	77045.3	83763.6
O08836	O08836	IGBP1_RAT	Igbp1	Immunoglobulin-binding protein 1	1	SAVESGQADDER	SAVESGQADDER	2	SAVESGQADDER2			3690.55
Q5RJY4	Q5RJY4	DRS7B_RAT	Dhrs7b	Dehydrogenase/reductase SDR family member 7B	1	SAVEVAQDIFDAVGK	SAVEVAQDIFDAVGK	2	SAVEVAQDIFDAVGK2	14445.3	22034.5	25593
Q5RJY4	Q5RJY4	DRS7B_RAT	Dhrs7b	Dehydrogenase/reductase SDR family member 7B	1	SAVEVAQDIFDAVGKK	SAVEVAQDIFDAVGKK	3	SAVEVAQDIFDAVGKK3	9119.88	7678.67	16480.7
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	SAVGELSDDSSNVVQLIK	SAVGELSDDSSNVVQLIK	2	SAVGELSDDSSNVVQLIK2	54909.5	55466	66783.8
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	SAVGELSDDSSNVVQLIK	SAVGELSDDSSNVVQLIK	3	SAVGELSDDSSNVVQLIK3	24077.7	19172.3	28778.3
F7F5Q9	F7F5Q9	F7F5Q9_RAT	Hcls1	Hematopoietic cell specific Lyn substrate 1	1	SAVGFDYK	SAVGFDYK	1	SAVGFDYK1	2004.64	3196.68	4690.23
F7F5Q9	F7F5Q9	F7F5Q9_RAT	Hcls1	Hematopoietic cell specific Lyn substrate 1	1	SAVGFDYK	SAVGFDYK	2	SAVGFDYK2	221416	235848	209801
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	SAVGFDYQGK	SAVGFDYQGK	2	SAVGFDYQGK2	413836	514233	515157
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	SAVGFEYQGK	SAVGFEYQGK	2	SAVGFEYQGK2	808166	778398	831374
F7F5Q9	F7F5Q9	F7F5Q9_RAT	Hcls1	Hematopoietic cell specific Lyn substrate 1	1	SAVGFNEMEAPTTAYK	SAVGFNEMEAPTTAYK	2	SAVGFNEMEAPTTAYK2	59797	53034.4	53430.9
F7F5Q9	F7F5Q9	F7F5Q9_RAT	Hcls1	Hematopoietic cell specific Lyn substrate 1	1	SAVGFNEMEAPTTAYK	SAVGFNEMEAPTTAYK	3	SAVGFNEMEAPTTAYK3	7715.69	14522.7	20163.5
F7F5Q9	F7F5Q9	F7F5Q9_RAT	Hcls1	Hematopoietic cell specific Lyn substrate 1	1	SAVGFNEMEAPTTAYKK	SAVGFNEMEAPTTAYKK	3	SAVGFNEMEAPTTAYKK3	24177	35578.3	38475.8
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	SAVGHEYQSK	SAVGHEYQSK	2	SAVGHEYQSK2			73565.9
F7F5Q9	F7F5Q9	F7F5Q9_RAT	Hcls1	Hematopoietic cell specific Lyn substrate 1	1	SAVGHEYVAEVEK	SAVGHEYVAEVEK	2	SAVGHEYVAEVEK2	12591.8	16535.1	12445.5
F7F5Q9	F7F5Q9	F7F5Q9_RAT	Hcls1	Hematopoietic cell specific Lyn substrate 1	1	SAVGHEYVAEVEK	SAVGHEYVAEVEK	3	SAVGHEYVAEVEK3	270426	307700	284539
P19356	P19356	HEM3_RAT	Hmbs	Porphobilinogen deaminase	1	SAVGTSSLR	SAVGTSSLR	2	SAVGTSSLR2	5057.21		3025.76
A0A8I6A371	A0A8I6A371	A0A8I6A371_RAT	Nmi	N-myc (and STAT) interactor	1	SAVITFVVAGVADK	SAVITFVVAGVADK	2	SAVITFVVAGVADK2	30319.1	17781	18206.4
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	SAVLEDDK	SAVLEDDK	2	SAVLEDDK2	44711.9	35178.5	42082.4
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	SAVLISSK	SAVLISSK	2	SAVLISSK2	145003	127534	142193
Q4AEF8	Q4AEF8;D4ABY2	COPG1_RAT	Copg1	Coatomer subunit gamma-1	0	SAVLQEAR	SAVLQEAR	2	SAVLQEAR2	965891	1.18329e+06	992894
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	SAVLQTGCPSVGIPHSGYVNAHLEK	SAVLQTGC(UniMod:4)PSVGIPHSGYVNAHLEK	4	SAVLQTGC(UniMod:4)PSVGIPHSGYVNAHLEK4	27178.3	26206	20514.5
Q9Z272	Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	1	SAVPFLPVNPEYSATR	SAVPFLPVNPEYSATR	2	SAVPFLPVNPEYSATR2	29373	27639.3	18754.3
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	SAVPPQEK	SAVPPQEK	2	SAVPPQEK2	27554.7		35216.1
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	SAVQATSPIPAHSLAAFGLFLR	SAVQATSPIPAHSLAAFGLFLR	3	SAVQATSPIPAHSLAAFGLFLR3	11586.3	13844	10187.8
Q6AXM5	Q6AXM5	CEPT1_RAT	Cept1	Choline/ethanolaminephosphotransferase 1	1	SAVQLFEK	SAVQLFEK	2	SAVQLFEK2	8988.15	9374.05	
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	SAVQTLSR	SAVQTLSR	2	SAVQTLSR2	66548.7	60270.8	82902.9
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	SAVRPASLNLNR	SAVRPASLNLNR	3	SAVRPASLNLNR3	33800.7	39786.8	42610.5
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	SAVTTVVNPK	SAVTTVVNPK	2	SAVTTVVNPK2	905131	837561	719561
D3ZJI7	D3ZJI7	D3ZJI7_RAT	Serpinb11	Serpin family B member 11	1	SAVVDMMYQTGTFK	SAVVDMMYQTGTFK	2	SAVVDMMYQTGTFK2		3198.08	4947.13
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	SAVVEMLIMR	SAVVEMLIMR	2	SAVVEMLIMR2	1.48878e+06	1.37103e+06	1.31462e+06
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	SAVVEMLIMR	SAVVEMLIMR	3	SAVVEMLIMR3	4967.25	3371.93	4327.8
Q923M1	Q923M1	MSRA_RAT	Msra	Mitochondrial peptide methionine sulfoxide reductase	1	SAVYPTSAVQMEAALK	SAVYPTSAVQMEAALK	2	SAVYPTSAVQMEAALK2	15084.3	12385.2	15848.5
Q06880	Q06880	NBL1_RAT	Nbl1	Neuroblastoma suppressor of tumorigenicity 1	1	SAWCEAK	SAWC(UniMod:4)EAK	1	SAWC(UniMod:4)EAK1	4954.84	2709.15	3530.59
Q06880	Q06880	NBL1_RAT	Nbl1	Neuroblastoma suppressor of tumorigenicity 1	1	SAWCEAK	SAWC(UniMod:4)EAK	2	SAWC(UniMod:4)EAK2	178027	199468	196863
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	SAWGQQPDLAANEAQLLR	SAWGQQPDLAANEAQLLR	3	SAWGQQPDLAANEAQLLR3	21400.6	23003.8	25509.4
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	SAWGQQPDLAANEAQLLRK	SAWGQQPDLAANEAQLLRK	3	SAWGQQPDLAANEAQLLRK3	1376.88	5796.68	
P54001	P54001	P4HA1_RAT	P4ha1	Prolyl 4-hydroxylase subunit alpha-1	1	SAWLSGYEDPVVSR	SAWLSGYEDPVVSR	2	SAWLSGYEDPVVSR2	59100.8	41900.6	55671.2
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	SAWQTLNEFAR	SAWQTLNEFAR	2	SAWQTLNEFAR2	25253.1	36237.1	41607.5
Q5U2U2	Q5U2U2	CRKL_RAT	Crkl	Crk-like protein	1	SAWYMGPVSR	SAWYMGPVSR	2	SAWYMGPVSR2	34972.6	28877.7	38383.6
Q9ESC1	Q9ESC1	AGRL4_RAT	Adgrl4	Adhesion G protein-coupled receptor L4	1	SAYDPNGNVIVAFLCYR	SAYDPNGNVIVAFLC(UniMod:4)YR	2	SAYDPNGNVIVAFLC(UniMod:4)YR2	15687.6	16236.2	7566.22
Q9ESC1	Q9ESC1	AGRL4_RAT	Adgrl4	Adhesion G protein-coupled receptor L4	1	SAYDPNGNVIVAFLCYR	SAYDPNGNVIVAFLC(UniMod:4)YR	3	SAYDPNGNVIVAFLC(UniMod:4)YR3	674.177	10189.3	4279.83
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	SAYDSTMETMNYAQIR	SAYDSTMETMNYAQIR	2	SAYDSTMETMNYAQIR2	9671.9	13229.5	19912.4
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	SAYEEQR	SAYEEQR	2	SAYEEQR2			264004
P30349	P30349	LKHA4_RAT	Lta4h	Leukotriene A-4 hydrolase	1	SAYEFSETESMLK	SAYEFSETESMLK	2	SAYEFSETESMLK2	12807.3	10455.1	6079.99
Q6IG12	Q6IG12	K2C7_RAT	Krt7	Keratin, type II cytoskeletal 7	1	SAYGGPVGAGIR	SAYGGPVGAGIR	2	SAYGGPVGAGIR2	2417.03		
A0A8I6ASK1	A0A8I6ASK1	A0A8I6ASK1_RAT	P4ha2	procollagen-proline 4-dioxygenase	1	SAYNEGDYYHTVLWMEQVLK	SAYNEGDYYHTVLWMEQVLK	3	SAYNEGDYYHTVLWMEQVLK3	19927.1	29653.1	16165.2
G3V9A3	Q5EBB0;G3V9A3	G3V9A3_RAT	Sfn	Stratifin	0	SAYQEAMDISK	SAYQEAMDISK	2	SAYQEAMDISK2	5271.35	10473.5	4390.61
Q6AYA5	Q6AYA5	T106B_RAT	Tmem106b	Transmembrane protein 106B	1	SAYVSYDSQK	SAYVSYDSQK	2	SAYVSYDSQK2	24271.2	25052.8	36570.6
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	SAYYKPLLSAEEAAK	SAYYKPLLSAEEAAK	2	SAYYKPLLSAEEAAK2	36112.2	39744	48800.8
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	SAYYKPLLSAEEAAK	SAYYKPLLSAEEAAK	3	SAYYKPLLSAEEAAK3	81715.7	82281	92646.3
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	SCAAIAELLQQSK	SC(UniMod:4)AAIAELLQQSK	2	SC(UniMod:4)AAIAELLQQSK2	20329.7	21967.9	10012
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	SCADALGDR	SC(UniMod:4)ADALGDR	1	SC(UniMod:4)ADALGDR1	21237.4	13872.9	19635.7
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	SCADALGDR	SC(UniMod:4)ADALGDR	2	SC(UniMod:4)ADALGDR2	5.41349e+06	3.93e+06	3.84601e+06
Q8VHK7	Q8VHK7	HDGF_RAT	Hdgf	Hepatoma-derived growth factor	1	SCAEEPEVEPEAHEGDGDK	SC(UniMod:4)AEEPEVEPEAHEGDGDK	3	SC(UniMod:4)AEEPEVEPEAHEGDGDK3	2857.61		
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	SCAFAMGHLVR	SC(UniMod:4)AFAMGHLVR	3	SC(UniMod:4)AFAMGHLVR3	4244.7	5495.67	921.215
Q569A6	F1LPB5;Q5U305;Q569A6	ERD21_RAT	Kdelr1	ER lumen protein-retaining receptor 1	0	SCAGISGK	SC(UniMod:4)AGISGK	2	SC(UniMod:4)AGISGK2			17741.7
A0A8I6A2I6	A0A8I6A2I6	A0A8I6A2I6_RAT	Frrs1	Ferric-chelate reductase 1	1	SCAGMIPQHNHSPQSDPVHK	SC(UniMod:4)AGMIPQHNHSPQSDPVHK	4	SC(UniMod:4)AGMIPQHNHSPQSDPVHK4	9244.37	7389.08	9017.47
P19804	A0A8I6A4T4;P19804	NDKB_RAT	Nme2	Nucleoside diphosphate kinase B	0	SCAHDWVYE	SC(UniMod:4)AHDWVYE	2	SC(UniMod:4)AHDWVYE2	116621	99796.6	113910
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	SCAHSEQTLSLTPAKPIR	SC(UniMod:4)AHSEQTLSLTPAKPIR	4	SC(UniMod:4)AHSEQTLSLTPAKPIR4	6132.95	10124.9	7717.63
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	SCALDQNCQWEPR	SC(UniMod:4)ALDQNC(UniMod:4)QWEPR	2	SC(UniMod:4)ALDQNC(UniMod:4)QWEPR2	29763	39191.4	20946.2
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	SCALSNVK	SC(UniMod:4)ALSNVK	2	SC(UniMod:4)ALSNVK2	15036.9	14204	15652.4
M0R6J0	M0R6J0	M0R6J0_RAT	Mrpl39	Mitochondrial ribosomal protein L39	1	SCAMMMGCVLER	SC(UniMod:4)AMMMGC(UniMod:4)VLER	2	SC(UniMod:4)AMMMGC(UniMod:4)VLER2	2388.15	3153.62	
Q05982	Q05982	NDKA_RAT	Nme1	Nucleoside diphosphate kinase A	1	SCAQNWIYE	SC(UniMod:4)AQNWIYE	2	SC(UniMod:4)AQNWIYE2	5954.79	3689.48	4458.2
A0A0G2KAF4	A0A0G2KAF4	A0A0G2KAF4_RAT	Nfxl1	Nuclear transcription factor, X-box binding-like 1	1	SCASPVWHCDQVCR	SC(UniMod:4)ASPVWHC(UniMod:4)DQVC(UniMod:4)R	3	SC(UniMod:4)ASPVWHC(UniMod:4)DQVC(UniMod:4)R3	13148.4	19107.8	6067.8
P13221	P13221	AATC_RAT	Got1	Aspartate aminotransferase, cytoplasmic	1	SCASQLVLGDNSPALR	SC(UniMod:4)ASQLVLGDNSPALR	2	SC(UniMod:4)ASQLVLGDNSPALR2	7735.94	7376.45	9418.92
P13221	P13221	AATC_RAT	Got1	Aspartate aminotransferase, cytoplasmic	1	SCASQLVLGDNSPALR	SC(UniMod:4)ASQLVLGDNSPALR	3	SC(UniMod:4)ASQLVLGDNSPALR3	12246.7		17160.1
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	SCATFSSSHR	SC(UniMod:4)ATFSSSHR	2	SC(UniMod:4)ATFSSSHR2	31985.4		13803.7
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	SCATFSSSHR	SC(UniMod:4)ATFSSSHR	3	SC(UniMod:4)ATFSSSHR3	25513.6		
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	SCAVAEYGVYVR	SC(UniMod:4)AVAEYGVYVR	2	SC(UniMod:4)AVAEYGVYVR2	449912	423545	450142
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	SCAVAEYGVYVR	SC(UniMod:4)AVAEYGVYVR	3	SC(UniMod:4)AVAEYGVYVR3	5096.88	7606.22	7052.66
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	SCCLAEIR	SC(UniMod:4)C(UniMod:4)LAEIR	2	SC(UniMod:4)C(UniMod:4)LAEIR2	72631	68162.2	56989.7
D3ZE72	D3ZE72	D3ZE72_RAT	Metap1	Methionine aminopeptidase	1	SCCTSVNEVICHGIPDR	SC(UniMod:4)C(UniMod:4)TSVNEVIC(UniMod:4)HGIPDR	3	SC(UniMod:4)C(UniMod:4)TSVNEVIC(UniMod:4)HGIPDR3	11569.7	15563.4	6915.54
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	SCDAIPNQLLNGR	SC(UniMod:4)DAIPNQLLNGR	2	SC(UniMod:4)DAIPNQLLNGR2	46006.5	34734.8	57034.8
Q6AY20	Q6AY20;A0A8I6A547	MPRD_RAT	M6pr	Cation-dependent mannose-6-phosphate receptor	0	SCDLVGEK	SC(UniMod:4)DLVGEK	2	SC(UniMod:4)DLVGEK2	56886.3	46732.7	49159.4
Q6AY20	Q6AY20;A0A8I6A547	MPRD_RAT	M6pr	Cation-dependent mannose-6-phosphate receptor	0	SCDLVGEKDK	SC(UniMod:4)DLVGEKDK	2	SC(UniMod:4)DLVGEKDK2	7237.75	4712.63	6030.77
Q6AY20	Q6AY20;A0A8I6A547	MPRD_RAT	M6pr	Cation-dependent mannose-6-phosphate receptor	0	SCDLVGEKDK	SC(UniMod:4)DLVGEKDK	3	SC(UniMod:4)DLVGEKDK3	22508.9	19949.2	26324.7
Q6AY20	Q6AY20;A0A8I6A547	MPRD_RAT	M6pr	Cation-dependent mannose-6-phosphate receptor	0	SCDLVGEKDKESK	SC(UniMod:4)DLVGEKDKESK	2	SC(UniMod:4)DLVGEKDKESK2	13038.7	8805.08	7679
Q6AY20	Q6AY20;A0A8I6A547	MPRD_RAT	M6pr	Cation-dependent mannose-6-phosphate receptor	0	SCDLVGEKDKESK	SC(UniMod:4)DLVGEKDKESK	3	SC(UniMod:4)DLVGEKDKESK3	86085.2	152453	74963
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	SCDMPVFENAMTK	SC(UniMod:4)DMPVFENAMTK	2	SC(UniMod:4)DMPVFENAMTK2	472847	435003	440271
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	SCDMPVFENAMTK	SC(UniMod:4)DMPVFENAMTK	3	SC(UniMod:4)DMPVFENAMTK3	4358.53	5282.62	6959.49
Q5FVP9	Q5FVP9	Q5FVP9_RAT	LOC100361907	Cfh protein	1	SCDMPVFENAVIK	SC(UniMod:4)DMPVFENAVIK	2	SC(UniMod:4)DMPVFENAVIK2	246499	166151	166291
A0A8I6AKL8	A0A8I6AKL8	A0A8I6AKL8_RAT	Xpo5	Exportin 5	1	SCDPAAQDPCGLNR	SC(UniMod:4)DPAAQDPC(UniMod:4)GLNR	2	SC(UniMod:4)DPAAQDPC(UniMod:4)GLNR2	2662.37	476.611	1829.67
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	SCDQPLEIPNGEIK	SC(UniMod:4)DQPLEIPNGEIK	2	SC(UniMod:4)DQPLEIPNGEIK2	281116	246723	253483
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	SCDQPLEIPNGEIK	SC(UniMod:4)DQPLEIPNGEIK	3	SC(UniMod:4)DQPLEIPNGEIK3	9802.1	12523.4	8495.84
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	SCDSFNLLHPIFQR	SC(UniMod:4)DSFNLLHPIFQR	2	SC(UniMod:4)DSFNLLHPIFQR2	6259.06	9553.83	7168.99
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	SCDSFNLLHPIFQR	SC(UniMod:4)DSFNLLHPIFQR	3	SC(UniMod:4)DSFNLLHPIFQR3	80713.3	58146.8	63136
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	SCDSLNNR	SC(UniMod:4)DSLNNR	1	SC(UniMod:4)DSLNNR1	618440		504137
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	SCDSLNNR	SC(UniMod:4)DSLNNR	2	SC(UniMod:4)DSLNNR2	1.62072e+07		1.10645e+07
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	SCDSLNNRCEGSSVQTR	SC(UniMod:4)DSLNNRC(UniMod:4)EGSSVQTR	3	SC(UniMod:4)DSLNNRC(UniMod:4)EGSSVQTR3	153387	272769	234087
A0A0G2K975	A0A0G2K975	A0A0G2K975_RAT	Cfhr4	Similar to complement factor H-related protein	1	SCDVPVFENAK	SC(UniMod:4)DVPVFENAK	2	SC(UniMod:4)DVPVFENAK2	50766.3	51936.6	60310.8
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	SCDVPVFENSVTK	SC(UniMod:4)DVPVFENSVTK	2	SC(UniMod:4)DVPVFENSVTK2	2.05872e+06	1.62469e+06	1.51444e+06
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	SCDVPVFENSVTK	SC(UniMod:4)DVPVFENSVTK	3	SC(UniMod:4)DVPVFENSVTK3	2865.1		
D4A2G6	D4A2G6	D4A2G6_RAT	Thbs2	Thrombospondin 2	1	SCDVTSNTCLGPSIQTR	SC(UniMod:4)DVTSNTC(UniMod:4)LGPSIQTR	2	SC(UniMod:4)DVTSNTC(UniMod:4)LGPSIQTR2	3586.83	3635.83	2668.54
D4A2G6	D4A2G6	D4A2G6_RAT	Thbs2	Thrombospondin 2	1	SCDVTSNTCLGPSIQTR	SC(UniMod:4)DVTSNTC(UniMod:4)LGPSIQTR	3	SC(UniMod:4)DVTSNTC(UniMod:4)LGPSIQTR3	7019.56	4506.64	6961.1
Q6AYC2	Q6AYC2	IRGM_RAT	Irgm	Immunity-related GTPase family M protein	1	SCEAAPLLPK	SC(UniMod:4)EAAPLLPK	2	SC(UniMod:4)EAAPLLPK2	13558.9	5884.19	8292.11
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	SCEAETLR	SC(UniMod:4)EAETLR	2	SC(UniMod:4)EAETLR2	52802.8	58550	51424.3
B2RYB1	B2RYB1	B2RYB1_RAT	Txndc11	Thioredoxin domain containing 11	1	SCEATAPSSIPHIEENR	SC(UniMod:4)EATAPSSIPHIEENR	3	SC(UniMod:4)EATAPSSIPHIEENR3	1350.51	308.699	1569.6
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	SCEDFQNWK	SC(UniMod:4)EDFQNWK	2	SC(UniMod:4)EDFQNWK2	12585	9190.82	3471.35
P21674	P21674	FST_RAT	Fst	Follistatin	1	SCEDIQCGGGK	SC(UniMod:4)EDIQC(UniMod:4)GGGK	2	SC(UniMod:4)EDIQC(UniMod:4)GGGK2	6164.75	5400.1	4428.1
Q6P767	Q6P767	PTTG_RAT	Pttg1ip	Pituitary tumor-transforming gene 1 protein-interacting protein	1	SCEECLR	SC(UniMod:4)EEC(UniMod:4)LR	2	SC(UniMod:4)EEC(UniMod:4)LR2	248749	213307	209385
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	SCEGIPVCLSLDLDK	SC(UniMod:4)EGIPVC(UniMod:4)LSLDLDK	2	SC(UniMod:4)EGIPVC(UniMod:4)LSLDLDK2	1.4494e+06	1.72911e+06	1.33596e+06
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	SCEGIPVCLSLDLDK	SC(UniMod:4)EGIPVC(UniMod:4)LSLDLDK	3	SC(UniMod:4)EGIPVC(UniMod:4)LSLDLDK3	20999.7	32689.4	20479.3
Q9QYJ2	Q63713;Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	0	SCEIDPVK	SC(UniMod:4)EIDPVK	1	SC(UniMod:4)EIDPVK1	22515.6	28093.6	22680.1
Q9QYJ2	Q63713;Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	0	SCEIDPVK	SC(UniMod:4)EIDPVK	2	SC(UniMod:4)EIDPVK2	745080	726732	695451
Q9QYJ2	Q63713;Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	0	SCEIDPVKLK	SC(UniMod:4)EIDPVKLK	3	SC(UniMod:4)EIDPVKLK3		3378.54	10590.1
F1M9Z5	F1M9Z5	F1M9Z5_RAT	Cd300le	Cd300 molecule-like family member E	1	SCEILVETDASER	SC(UniMod:4)EILVETDASER	2	SC(UniMod:4)EILVETDASER2	87884.5	86496.8	104242
D4A4Y0	D4A4Y0	D4A4Y0_RAT	Exosc4	Exosome component 4	1	SCEMGLQLR	SC(UniMod:4)EMGLQLR	2	SC(UniMod:4)EMGLQLR2	11723	5596.2	7316.13
Q32PX2	Q32PX2	AIMP2_RAT	Aimp2	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2	1	SCENLAPFSTALQLLK	SC(UniMod:4)ENLAPFSTALQLLK	2	SC(UniMod:4)ENLAPFSTALQLLK2	31473.7	33358.9	33368
Q32PX2	Q32PX2	AIMP2_RAT	Aimp2	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2	1	SCENLAPFSTALQLLK	SC(UniMod:4)ENLAPFSTALQLLK	3	SC(UniMod:4)ENLAPFSTALQLLK3	4125.14	2214.19	5491.47
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	SCEPAVPFPCGR	SC(UniMod:4)EPAVPFPC(UniMod:4)GR	2	SC(UniMod:4)EPAVPFPC(UniMod:4)GR2	4.83913e+07	4.5183e+07	5.31697e+07
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	SCEPAVPFPCGR	SC(UniMod:4)EPAVPFPC(UniMod:4)GR	3	SC(UniMod:4)EPAVPFPC(UniMod:4)GR3	1.44867e+06	1.35903e+06	1.48334e+06
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	SCEPAVPFPCGRVSVAYNSKK	SC(UniMod:4)EPAVPFPC(UniMod:4)GRVSVAYNSKK	4	SC(UniMod:4)EPAVPFPC(UniMod:4)GRVSVAYNSKK4	13610	15438.4	10469.3
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	SCESDAPFPVHPGTSECCTK	SC(UniMod:4)ESDAPFPVHPGTSEC(UniMod:4)C(UniMod:4)TK	3	SC(UniMod:4)ESDAPFPVHPGTSEC(UniMod:4)C(UniMod:4)TK3	2.94248e+06	2.16518e+06	2.06015e+06
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	SCEVIIGSTHILTPR	SC(UniMod:4)EVIIGSTHILTPR	2	SC(UniMod:4)EVIIGSTHILTPR2	3708.62	5419.15	7963.27
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	SCEVIIGSTHILTPR	SC(UniMod:4)EVIIGSTHILTPR	3	SC(UniMod:4)EVIIGSTHILTPR3	59883.8	47870.5	56305.3
Q7TSA0	Q7TSA0	MIRO2_RAT	Rhot2	Mitochondrial Rho GTPase 2	1	SCFGHPLAPQALEDVKR	SC(UniMod:4)FGHPLAPQALEDVKR	4	SC(UniMod:4)FGHPLAPQALEDVKR4	6942.84	7470.66	11819.8
P47875	P47875	CSRP1_RAT	Csrp1	Cysteine and glycine-rich protein 1	1	SCFLCMVCK	SC(UniMod:4)FLC(UniMod:4)MVC(UniMod:4)K	2	SC(UniMod:4)FLC(UniMod:4)MVC(UniMod:4)K2	234759	180873	248602
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	SCFQQNNNKPEISVK	SC(UniMod:4)FQQNNNKPEISVK	2	SC(UniMod:4)FQQNNNKPEISVK2	4429.18	4348.37	3739.09
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	SCFQQNNNKPEISVK	SC(UniMod:4)FQQNNNKPEISVK	3	SC(UniMod:4)FQQNNNKPEISVK3	232011	212228	248810
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SCFTTEFQVAYSSDR	SC(UniMod:4)FTTEFQVAYSSDR	2	SC(UniMod:4)FTTEFQVAYSSDR2	113755	108271	86490.8
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SCFTTEFQVAYSSDR	SC(UniMod:4)FTTEFQVAYSSDR	3	SC(UniMod:4)FTTEFQVAYSSDR3	21735.3	40436.7	30541.4
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	SCGAFLGELPNGHVFVPQNLQLGAK	SC(UniMod:4)GAFLGELPNGHVFVPQNLQLGAK	3	SC(UniMod:4)GAFLGELPNGHVFVPQNLQLGAK3	97538.2	114592	105744
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	SCGAFLGELPNGHVFVPQNLQLGAK	SC(UniMod:4)GAFLGELPNGHVFVPQNLQLGAK	4	SC(UniMod:4)GAFLGELPNGHVFVPQNLQLGAK4	1854.63		
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	SCGECLGSGDPHCGWCVLHNTCTR	SC(UniMod:4)GEC(UniMod:4)LGSGDPHC(UniMod:4)GWC(UniMod:4)VLHNTC(UniMod:4)TR	3	SC(UniMod:4)GEC(UniMod:4)LGSGDPHC(UniMod:4)GWC(UniMod:4)VLHNTC(UniMod:4)TR3	6627.26	10380.7	11681.6
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	SCGECLGSGDPHCGWCVLHNTCTR	SC(UniMod:4)GEC(UniMod:4)LGSGDPHC(UniMod:4)GWC(UniMod:4)VLHNTC(UniMod:4)TR	4	SC(UniMod:4)GEC(UniMod:4)LGSGDPHC(UniMod:4)GWC(UniMod:4)VLHNTC(UniMod:4)TR4	17116.7	12357.2	5560.19
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	SCGGGVTSQER	SC(UniMod:4)GGGVTSQER	2	SC(UniMod:4)GGGVTSQER2			22504.6
P08649	P08649	CO4_RAT	C4	Complement C4	1	SCGLFGLR	SC(UniMod:4)GLFGLR	1	SC(UniMod:4)GLFGLR1	12469.9	10201.5	15364.7
P08649	P08649	CO4_RAT	C4	Complement C4	1	SCGLFGLR	SC(UniMod:4)GLFGLR	2	SC(UniMod:4)GLFGLR2	5.84124e+07	5.96312e+07	6.24528e+07
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	SCGLHVTSIK	SC(UniMod:4)GLHVTSIK	2	SC(UniMod:4)GLHVTSIK2	30175.4	40632.1	19071.1
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	SCGLSNLACIR	SC(UniMod:4)GLSNLAC(UniMod:4)IR	2	SC(UniMod:4)GLSNLAC(UniMod:4)IR2	35931.1	28730.4	28094.5
Q6P777	Q6P777	MB12A_RAT	Mvb12a	Multivesicular body subunit 12A	1	SCGPLNLSAFGDLTIK	SC(UniMod:4)GPLNLSAFGDLTIK	2	SC(UniMod:4)GPLNLSAFGDLTIK2	26121.6		25079
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	SCGPSEDGVPR	SC(UniMod:4)GPSEDGVPR	2	SC(UniMod:4)GPSEDGVPR2	254505	259314	328202
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	SCGSLLPELSLAER	SC(UniMod:4)GSLLPELSLAER	2	SC(UniMod:4)GSLLPELSLAER2	12955.6	8155.27	
C9WPN6	C9WPN6	IF2H_RAT	Eif2s3y	Eukaryotic translation initiation factor 2 subunit 3, Y-linked	1	SCGSSTPDEFPSDIPGIK	SC(UniMod:4)GSSTPDEFPSDIPGIK	2	SC(UniMod:4)GSSTPDEFPSDIPGIK2	25680.6	29059.8	24899.5
P81795	P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	1	SCGSSTPDEFPTDIPGTK	SC(UniMod:4)GSSTPDEFPTDIPGTK	2	SC(UniMod:4)GSSTPDEFPTDIPGTK2	59502.9	70068	60810.9
P81795	P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	1	SCGSSTPDEFPTDIPGTK	SC(UniMod:4)GSSTPDEFPTDIPGTK	3	SC(UniMod:4)GSSTPDEFPTDIPGTK3	19074.4	21666.7	24369.9
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	SCGTGISTR	SC(UniMod:4)GTGISTR	2	SC(UniMod:4)GTGISTR2	44506.7	44562.7	37105.2
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	SCGVIAMPLAAQATHR	SC(UniMod:4)GVIAMPLAAQATHR	3	SC(UniMod:4)GVIAMPLAAQATHR3	9163.42	22158.8	8085.14
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	SCHASLGWSAGWYVPLSVLLPSGSR	SC(UniMod:4)HASLGWSAGWYVPLSVLLPSGSR	3	SC(UniMod:4)HASLGWSAGWYVPLSVLLPSGSR3	9935.95	8892.35	8029.07
G3V6A9	G3V6A9	G3V6A9_RAT	Mfap4	Microfibril-associated glycoprotein 4-like	1	SCHFANLNGFYLGGSHLSYANGINWAQWK	SC(UniMod:4)HFANLNGFYLGGSHLSYANGINWAQWK	4	SC(UniMod:4)HFANLNGFYLGGSHLSYANGINWAQWK4	151621	109075	111779
A0A8I6AFV5	A0A8I6AFV5	A0A8I6AFV5_RAT	ENSRNOG00000066958	Uncharacterized protein	1	SCHPSDLDYIK	SC(UniMod:4)HPSDLDYIK	3	SC(UniMod:4)HPSDLDYIK3	3790.53	1652.96	
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	SCHTGLGR	SC(UniMod:4)HTGLGR	1	SC(UniMod:4)HTGLGR1			937.589
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	SCHTGLGR	SC(UniMod:4)HTGLGR	2	SC(UniMod:4)HTGLGR2			102393
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	SCHTGVDR	SC(UniMod:4)HTGVDR	2	SC(UniMod:4)HTGVDR2			174287
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	SCHTGVDRTAGWNIPMGLLFSR	SC(UniMod:4)HTGVDRTAGWNIPMGLLFSR	4	SC(UniMod:4)HTGVDRTAGWNIPMGLLFSR4	4163.23	8811.59	1811.97
A0A8I5Y224	A0A8I5Y224	A0A8I5Y224_RAT	Adam9	ADAM metallopeptidase domain 9	1	SCIMNSGASGSR	SC(UniMod:4)IMNSGASGSR	2	SC(UniMod:4)IMNSGASGSR2	6056.54	9680.81	10126.3
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	SCISVLK	SC(UniMod:4)ISVLK	2	SC(UniMod:4)ISVLK2	23987.6	30367.9	28039.8
Q6V7K3	Q6V7K3	S35B1_RAT	Slc35b1	Solute carrier family 35 member B1	1	SCKPIPVMLLGVTLLK	SC(UniMod:4)KPIPVMLLGVTLLK	2	SC(UniMod:4)KPIPVMLLGVTLLK2	7139.21	3548.37	2755.22
Q6V7K3	Q6V7K3	S35B1_RAT	Slc35b1	Solute carrier family 35 member B1	1	SCKPIPVMLLGVTLLK	SC(UniMod:4)KPIPVMLLGVTLLK	3	SC(UniMod:4)KPIPVMLLGVTLLK3	32900.6	40873.2	23295.1
Q6V7K3	Q6V7K3	S35B1_RAT	Slc35b1	Solute carrier family 35 member B1	1	SCKPIPVMLLGVTLLKK	SC(UniMod:4)KPIPVMLLGVTLLKK	4	SC(UniMod:4)KPIPVMLLGVTLLKK4	2793.84	2707.61	
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	SCLDSFASR	SC(UniMod:4)LDSFASR	2	SC(UniMod:4)LDSFASR2	29103.5	29522.5	31796.6
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	SCLDYQTQETK	SC(UniMod:4)LDYQTQETK	2	SC(UniMod:4)LDYQTQETK2	9640.93	9729.16	14086.7
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	SCLFPFGLHCTGMPIK	SC(UniMod:4)LFPFGLHC(UniMod:4)TGMPIK	2	SC(UniMod:4)LFPFGLHC(UniMod:4)TGMPIK2	5102.82	4259.95	10218.2
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	SCLFPFGLHCTGMPIK	SC(UniMod:4)LFPFGLHC(UniMod:4)TGMPIK	3	SC(UniMod:4)LFPFGLHC(UniMod:4)TGMPIK3	46705.1	44124.7	71985.6
P51146	P51146	RAB4B_RAT	Rab4b	Ras-related protein Rab-4B	1	SCLLHQFIENK	SC(UniMod:4)LLHQFIENK	2	SC(UniMod:4)LLHQFIENK2	4043.85	3936.06	5196.82
P51146	P51146	RAB4B_RAT	Rab4b	Ras-related protein Rab-4B	1	SCLLHQFIENK	SC(UniMod:4)LLHQFIENK	3	SC(UniMod:4)LLHQFIENK3	51566.4	56395.1	69668.5
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	SCLLHQFTEK	SC(UniMod:4)LLHQFTEK	2	SC(UniMod:4)LLHQFTEK2	58774.4	48966.8	59319.6
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	SCLLHQFTEK	SC(UniMod:4)LLHQFTEK	3	SC(UniMod:4)LLHQFTEK3	258424	229438	278310
P05712	Q3B7V5;P05712	RAB2A_RAT	Rab2a	Ras-related protein Rab-2A	0	SCLLLQFTDKR	SC(UniMod:4)LLLQFTDKR	2	SC(UniMod:4)LLLQFTDKR2	17748.3	17103.7	12444.4
P05712	Q3B7V5;P05712	RAB2A_RAT	Rab2a	Ras-related protein Rab-2A	0	SCLLLQFTDKR	SC(UniMod:4)LLLQFTDKR	3	SC(UniMod:4)LLLQFTDKR3	111310	113101	104723
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	SCLLPQLHPQPDSGPQGR	SC(UniMod:4)LLPQLHPQPDSGPQGR	3	SC(UniMod:4)LLPQLHPQPDSGPQGR3	50110.9	40614.4	31666.7
D4A7F0	D4A7F0	D4A7F0_RAT	Ubr3	E3 ubiquitin-protein ligase	1	SCLNQLFHVLALHMR	SC(UniMod:4)LNQLFHVLALHMR	4	SC(UniMod:4)LNQLFHVLALHMR4	5047.04		
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	SCLNVFNNLAK	SC(UniMod:4)LNVFNNLAK	2	SC(UniMod:4)LNVFNNLAK2	12456.1	11517.5	9625.59
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	SCLPCPETTTTVK	SC(UniMod:4)LPC(UniMod:4)PETTTTVK	2	SC(UniMod:4)LPC(UniMod:4)PETTTTVK2	112140	166361	141890
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	SCLPPACFTPPSTAPPDPVLPPLPAK	SC(UniMod:4)LPPAC(UniMod:4)FTPPSTAPPDPVLPPLPAK	3	SC(UniMod:4)LPPAC(UniMod:4)FTPPSTAPPDPVLPPLPAK3	33614.8	34680	33072.4
B1WBZ6	B1WBZ6	B1WBZ6_RAT	RGD1565685	RGD1565685 protein	1	SCLQGFVNR	SC(UniMod:4)LQGFVNR	2	SC(UniMod:4)LQGFVNR2	23041.3	19409.8	10450.6
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	SCLQMTITWHLGR	SC(UniMod:4)LQMTITWHLGR	2	SC(UniMod:4)LQMTITWHLGR2	3825.09	2336.41	6490.11
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	SCLQMTITWHLGR	SC(UniMod:4)LQMTITWHLGR	3	SC(UniMod:4)LQMTITWHLGR3	87019.2	90005.7	83873.4
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	SCLSTAPFPCGK	SC(UniMod:4)LSTAPFPC(UniMod:4)GK	2	SC(UniMod:4)LSTAPFPC(UniMod:4)GK2	69582.1	3.7453e+07	64815.2
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	SCLSTAPFPCGK	SC(UniMod:4)LSTAPFPC(UniMod:4)GK	3	SC(UniMod:4)LSTAPFPC(UniMod:4)GK3	342052	365524	364041
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	SCLSTAPFPCGKTNK	SC(UniMod:4)LSTAPFPC(UniMod:4)GKTNK	3	SC(UniMod:4)LSTAPFPC(UniMod:4)GKTNK3	8110.95	25643.3	7781.67
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	SCLVEGDAK	SC(UniMod:4)LVEGDAK	1	SC(UniMod:4)LVEGDAK1	1267.7	2463.69	4145.88
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	SCLVEGDAK	SC(UniMod:4)LVEGDAK	2	SC(UniMod:4)LVEGDAK2	386585	350333	389887
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	SCLVVASTSGLESIK	SC(UniMod:4)LVVASTSGLESIK	2	SC(UniMod:4)LVVASTSGLESIK2	42093.4	54400.4	44212.4
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	SCMCTAGYSLR	SC(UniMod:4)MC(UniMod:4)TAGYSLR	2	SC(UniMod:4)MC(UniMod:4)TAGYSLR2	32420	39228.4	33841.9
Q5FVC7	A0A8I6GJX2;Q5FVC7	ACAP2_RAT	Acap2	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2	0	SCMLQADSEK	SC(UniMod:4)MLQADSEK	2	SC(UniMod:4)MLQADSEK2	12455.5	8829.32	6270.54
Q32PX7	Q32PX7	FUBP1_RAT	Fubp1	Far upstream element-binding protein 1	1	SCMLTGTPESVQSAK	SC(UniMod:4)MLTGTPESVQSAK	2	SC(UniMod:4)MLTGTPESVQSAK2	2029.6		1471.42
P04764	M0R5J4;A0A8I6GJ97;A0A8I6ASH7;P04764;A0A8I5YC61	ENOA_RAT	Eno1	Alpha-enolase	0	SCNCLLLK	SC(UniMod:4)NC(UniMod:4)LLLK	2	SC(UniMod:4)NC(UniMod:4)LLLK2	338821	300296	340361
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	SCNECSEGSFHLSK	SC(UniMod:4)NEC(UniMod:4)SEGSFHLSK	2	SC(UniMod:4)NEC(UniMod:4)SEGSFHLSK2	2988.59	3508.38	3001.49
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	SCNECSEGSFHLSK	SC(UniMod:4)NEC(UniMod:4)SEGSFHLSK	3	SC(UniMod:4)NEC(UniMod:4)SEGSFHLSK3	38510.2	31668.4	32414.6
Q3ZAU6	Q3ZAU6	Q3ZAU6_RAT	Rnf14	RBR-type E3 ubiquitin transferase	1	SCPCCGTPIQK	SC(UniMod:4)PC(UniMod:4)C(UniMod:4)GTPIQK	2	SC(UniMod:4)PC(UniMod:4)C(UniMod:4)GTPIQK2	44777	51799	59982.8
P40241	P40241	CD9_RAT	Cd9	CD9 antigen	1	SCPDAIDEVFHSK	SC(UniMod:4)PDAIDEVFHSK	2	SC(UniMod:4)PDAIDEVFHSK2	146704	157750	150727
P40241	P40241	CD9_RAT	Cd9	CD9 antigen	1	SCPDAIDEVFHSK	SC(UniMod:4)PDAIDEVFHSK	3	SC(UniMod:4)PDAIDEVFHSK3	1.22499e+06	1.07839e+06	1.14511e+06
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	SCPGSIVQGVCGCCYMCAR	SC(UniMod:4)PGSIVQGVC(UniMod:4)GC(UniMod:4)C(UniMod:4)YMC(UniMod:4)AR	3	SC(UniMod:4)PGSIVQGVC(UniMod:4)GC(UniMod:4)C(UniMod:4)YMC(UniMod:4)AR3	9307.63	10474.5	17324.4
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	SCPNDCSNQGQCVAGR	SC(UniMod:4)PNDC(UniMod:4)SNQGQC(UniMod:4)VAGR	2	SC(UniMod:4)PNDC(UniMod:4)SNQGQC(UniMod:4)VAGR2	440893	562448	424616
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	SCPNDCSNQGQCVAGR	SC(UniMod:4)PNDC(UniMod:4)SNQGQC(UniMod:4)VAGR	3	SC(UniMod:4)PNDC(UniMod:4)SNQGQC(UniMod:4)VAGR3	47513	53509.9	54711.6
Q80YN4	Q80YN4	CORIN_RAT	Corin	Atrial natriuretic peptide-converting enzyme	1	SCPSGSEISLLCTK	SC(UniMod:4)PSGSEISLLC(UniMod:4)TK	2	SC(UniMod:4)PSGSEISLLC(UniMod:4)TK2	5731.68		3798.94
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	SCPSHFDVDGPLIPSED	SC(UniMod:4)PSHFDVDGPLIPSED	2	SC(UniMod:4)PSHFDVDGPLIPSED2	33746.2	36552.9	30513.1
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	SCPTCTDSLLNGDFTIVYDVNR	SC(UniMod:4)PTC(UniMod:4)TDSLLNGDFTIVYDVNR	3	SC(UniMod:4)PTC(UniMod:4)TDSLLNGDFTIVYDVNR3	1.3055e+06	1.49477e+06	1.40839e+06
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	SCPTCTDSLLNGDFTIVYDVNR	SC(UniMod:4)PTC(UniMod:4)TDSLLNGDFTIVYDVNR	4	SC(UniMod:4)PTC(UniMod:4)TDSLLNGDFTIVYDVNR4	73021.5	61655.5	59223
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	SCPWDCGDGGR	SC(UniMod:4)PWDC(UniMod:4)GDGGR	2	SC(UniMod:4)PWDC(UniMod:4)GDGGR2	34875.9	35324.3	25952.1
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	SCQAMFQQINDSFR	SC(UniMod:4)QAMFQQINDSFR	2	SC(UniMod:4)QAMFQQINDSFR2	3806.89	4412.47	11125.7
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	SCQDIDECTDSDTCGDAR	SC(UniMod:4)QDIDEC(UniMod:4)TDSDTC(UniMod:4)GDAR	3	SC(UniMod:4)QDIDEC(UniMod:4)TDSDTC(UniMod:4)GDAR3	8426.7	11056.9	8849.77
Q9WVH8	Q9WVH8	FBLN5_RAT	Fbln5	Fibulin-5	1	SCQDINECEHR	SC(UniMod:4)QDINEC(UniMod:4)EHR	2	SC(UniMod:4)QDINEC(UniMod:4)EHR2	38745		46206.6
Q9WVH8	Q9WVH8	FBLN5_RAT	Fbln5	Fibulin-5	1	SCQDINECEHR	SC(UniMod:4)QDINEC(UniMod:4)EHR	3	SC(UniMod:4)QDINEC(UniMod:4)EHR3			42221.6
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	SCQFVAVR	SC(UniMod:4)QFVAVR	2	SC(UniMod:4)QFVAVR2	120752	102349	95978.7
D3ZSY8	D3ZSY8	D3ZSY8_RAT	Tbc1d10b	TBC1 domain family, member 10b	1	SCQGMYETMEQLR	SC(UniMod:4)QGMYETMEQLR	2	SC(UniMod:4)QGMYETMEQLR2	27736.6	43401.7	34987.4
D3ZSY8	D3ZSY8	D3ZSY8_RAT	Tbc1d10b	TBC1 domain family, member 10b	1	SCQGMYETMEQLR	SC(UniMod:4)QGMYETMEQLR	3	SC(UniMod:4)QGMYETMEQLR3	6932.31	9237.72	6296.52
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	SCQGSCAALSGLTGCTTR	SC(UniMod:4)QGSC(UniMod:4)AALSGLTGC(UniMod:4)TTR	2	SC(UniMod:4)QGSC(UniMod:4)AALSGLTGC(UniMod:4)TTR2	698273	732758	827330
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	SCQGSCAALSGLTGCTTR	SC(UniMod:4)QGSC(UniMod:4)AALSGLTGC(UniMod:4)TTR	3	SC(UniMod:4)QGSC(UniMod:4)AALSGLTGC(UniMod:4)TTR3	241728	287182	249368
Q9JMK8	Q9JMK8	VPS54_RAT	Vps54	Vacuolar protein sorting-associated protein 54	1	SCQLVLGAGALQVVGLK	SC(UniMod:4)QLVLGAGALQVVGLK	2	SC(UniMod:4)QLVLGAGALQVVGLK2		1723.96	633.538
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	SCQTALAEILDVLVR	SC(UniMod:4)QTALAEILDVLVR	2	SC(UniMod:4)QTALAEILDVLVR2	8184.64		
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	SCQTALAEILDVLVR	SC(UniMod:4)QTALAEILDVLVR	3	SC(UniMod:4)QTALAEILDVLVR3		4217.51	1845.01
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	SCRNPEQNPCSVHAQCIEER	SC(UniMod:4)RNPEQNPC(UniMod:4)SVHAQC(UniMod:4)IEER	3	SC(UniMod:4)RNPEQNPC(UniMod:4)SVHAQC(UniMod:4)IEER3	3376.51		4557.86
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	SCRNPEQNPCSVHAQCIEER	SC(UniMod:4)RNPEQNPC(UniMod:4)SVHAQC(UniMod:4)IEER	4	SC(UniMod:4)RNPEQNPC(UniMod:4)SVHAQC(UniMod:4)IEER4	25488.8	53570.4	79451.8
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	SCRNPGDLQNGK	SC(UniMod:4)RNPGDLQNGK	2	SC(UniMod:4)RNPGDLQNGK2	9725.21		13932.1
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	SCRNPGDLQNGK	SC(UniMod:4)RNPGDLQNGK	3	SC(UniMod:4)RNPGDLQNGK3	105512		111905
D3ZZ26	D3ZZ26	D3ZZ26_RAT	Ppp1r3d	Protein phosphatase 1, regulatory subunit 3D	1	SCRPPGCDPR	SC(UniMod:4)RPPGC(UniMod:4)DPR	2	SC(UniMod:4)RPPGC(UniMod:4)DPR2			180514
D3ZZ26	D3ZZ26	D3ZZ26_RAT	Ppp1r3d	Protein phosphatase 1, regulatory subunit 3D	1	SCRPPGCDPR	SC(UniMod:4)RPPGC(UniMod:4)DPR	3	SC(UniMod:4)RPPGC(UniMod:4)DPR3			135180
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	SCRPTDEACMR	SC(UniMod:4)RPTDEAC(UniMod:4)MR	2	SC(UniMod:4)RPTDEAC(UniMod:4)MR2	13550.5	15087.7	7383.4
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	SCRPTDEACMR	SC(UniMod:4)RPTDEAC(UniMod:4)MR	3	SC(UniMod:4)RPTDEAC(UniMod:4)MR3	201435	230110	111945
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	SCRPTDEACMRDPVHTVSHTVISLPTFR	SC(UniMod:4)RPTDEAC(UniMod:4)MRDPVHTVSHTVISLPTFR	4	SC(UniMod:4)RPTDEAC(UniMod:4)MRDPVHTVSHTVISLPTFR4	69472.3	43746.7	35257.4
Q09137	Q09137	AAPK2_RAT	Prkaa2	5'-AMP-activated protein kinase catalytic subunit alpha-2	1	SCSAAGLHRPR	SC(UniMod:4)SAAGLHRPR	3	SC(UniMod:4)SAAGLHRPR3			13589.8
B0BNN4	B0BNN4	B0BNN4_RAT	Cfp	Complement factor properdin	1	SCSAPAPSHQPPGKPCSGTAYEHR	SC(UniMod:4)SAPAPSHQPPGKPC(UniMod:4)SGTAYEHR	3	SC(UniMod:4)SAPAPSHQPPGKPC(UniMod:4)SGTAYEHR3	2477.03	3645.14	
B0BNN4	B0BNN4	B0BNN4_RAT	Cfp	Complement factor properdin	1	SCSAPAPSHQPPGKPCSGTAYEHR	SC(UniMod:4)SAPAPSHQPPGKPC(UniMod:4)SGTAYEHR	4	SC(UniMod:4)SAPAPSHQPPGKPC(UniMod:4)SGTAYEHR4	52119.4	33119.2	36939.9
F1LU27	F1LU27	F1LU27_RAT	Focad	Focadhesin	1	SCSDNVVVR	SC(UniMod:4)SDNVVVR	2	SC(UniMod:4)SDNVVVR2			9532.08
Q9R1Z0	Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	1	SCSGVEFSTSGHAYTDTGK	SC(UniMod:4)SGVEFSTSGHAYTDTGK	3	SC(UniMod:4)SGVEFSTSGHAYTDTGK3	86101.1	70745.1	90615.9
P81155	P81155	VDAC2_RAT	Vdac2	Voltage-dependent anion-selective channel protein 2	1	SCSGVEFSTSGSSNTDTGK	SC(UniMod:4)SGVEFSTSGSSNTDTGK	2	SC(UniMod:4)SGVEFSTSGSSNTDTGK2	192288	132300	149636
P81155	P81155	VDAC2_RAT	Vdac2	Voltage-dependent anion-selective channel protein 2	1	SCSGVEFSTSGSSNTDTGK	SC(UniMod:4)SGVEFSTSGSSNTDTGK	3	SC(UniMod:4)SGVEFSTSGSSNTDTGK3	7040.62	9934.59	13493.1
Q0D2L6	Q0D2L6	Q0D2L6_RAT	Rragc	Ras-related GTP-binding protein	1	SCSHQTSAPSLK	SC(UniMod:4)SHQTSAPSLK	3	SC(UniMod:4)SHQTSAPSLK3	53593	37503.5	53192.9
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	SCSIVMLTELEER	SC(UniMod:4)SIVMLTELEER	2	SC(UniMod:4)SIVMLTELEER2	19944.4	10904	15881.3
P47727	P47727	CBR1_RAT	Cbr1	Carbonyl reductase [NADPH] 1	1	SCSPELQQK	SC(UniMod:4)SPELQQK	2	SC(UniMod:4)SPELQQK2	30363.3	33690	34576.9
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	SCSPSDK	SC(UniMod:4)SPSDK	1	SC(UniMod:4)SPSDK1	2393.29		4221.45
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	SCSPSDK	SC(UniMod:4)SPSDK	2	SC(UniMod:4)SPSDK2	130869	108434	194655
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	SCSPSDKCACGALTSQHIR	SC(UniMod:4)SPSDKC(UniMod:4)AC(UniMod:4)GALTSQHIR	4	SC(UniMod:4)SPSDKC(UniMod:4)AC(UniMod:4)GALTSQHIR4	4989.41	5795.4	3772.64
Q3B7U9	Q3B7U9	FKBP8_RAT	Fkbp8	Peptidyl-prolyl cis-trans isomerase FKBP8	1	SCSQVLEHQPDNIK	SC(UniMod:4)SQVLEHQPDNIK	2	SC(UniMod:4)SQVLEHQPDNIK2	2076.76		
Q3B7U9	Q3B7U9	FKBP8_RAT	Fkbp8	Peptidyl-prolyl cis-trans isomerase FKBP8	1	SCSQVLEHQPDNIK	SC(UniMod:4)SQVLEHQPDNIK	3	SC(UniMod:4)SQVLEHQPDNIK3	40343.4	40885.3	35791
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	SCSSTPSSGATVDSGQR	SC(UniMod:4)SSTPSSGATVDSGQR	2	SC(UniMod:4)SSTPSSGATVDSGQR2	3785.26	2826.58	6702.75
P08483	P08483	ACM3_RAT	Chrm3	Muscarinic acetylcholine receptor M3	1	SCSSYELQQQGVK	SC(UniMod:4)SSYELQQQGVK	2	SC(UniMod:4)SSYELQQQGVK2	3314.88		
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	SCSVIYCAR	SC(UniMod:4)SVIYC(UniMod:4)AR	2	SC(UniMod:4)SVIYC(UniMod:4)AR2	6285.79	3482.37	3615.57
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	SCSVLQMAK	SC(UniMod:4)SVLQMAK	2	SC(UniMod:4)SVLQMAK2	16936.8	14658.5	12889.1
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	SCTDVTEYAVQR	SC(UniMod:4)TDVTEYAVQR	2	SC(UniMod:4)TDVTEYAVQR2	35427.3	35001.5	40923
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	SCTDVTEYAVQR	SC(UniMod:4)TDVTEYAVQR	3	SC(UniMod:4)TDVTEYAVQR3			3882.81
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	SCTFQLLK	SC(UniMod:4)TFQLLK	2	SC(UniMod:4)TFQLLK2		18008.5	9420.76
D3ZJR7	D3ZJR7	D3ZJR7_RAT	Dsc2	Desmocollin 2	1	SCTGTLGILLEDVNDNGPFIPK	SC(UniMod:4)TGTLGILLEDVNDNGPFIPK	3	SC(UniMod:4)TGTLGILLEDVNDNGPFIPK3		9724.36	4895.71
A0A8I5YC01	A0A8I5YC01	A0A8I5YC01_RAT	Gimap1	GTPase, IMAP family member 1	1	SCTLASR	SC(UniMod:4)TLASR	2	SC(UniMod:4)TLASR2	17949.1	26007.4	28813.3
D4ACK7	D4ACK7	D4ACK7_RAT	Cnnm3	Metal transporter	1	SCTYCPDYTVR	SC(UniMod:4)TYC(UniMod:4)PDYTVR	2	SC(UniMod:4)TYC(UniMod:4)PDYTVR2	4232.04	4172.37	1284.79
B0BNJ4	B0BNJ4	B0BNJ4_RAT	Ethe1	ETHE1, persulfide dioxygenase	1	SCTYTYLLGDR	SC(UniMod:4)TYTYLLGDR	2	SC(UniMod:4)TYTYLLGDR2	7871.87		7683.06
B0BNJ4	B0BNJ4	B0BNJ4_RAT	Ethe1	ETHE1, persulfide dioxygenase	1	SCTYTYLLGDRDSR	SC(UniMod:4)TYTYLLGDRDSR	3	SC(UniMod:4)TYTYLLGDRDSR3	10741.3		17801.5
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	SCVAGVMGAK	SC(UniMod:4)VAGVMGAK	1	SC(UniMod:4)VAGVMGAK1	13985.2	10237.2	5376.68
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	SCVAGVMGAK	SC(UniMod:4)VAGVMGAK	2	SC(UniMod:4)VAGVMGAK2	827984	816253	808855
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	SCVCAVGWAGNGLLCGR	SC(UniMod:4)VC(UniMod:4)AVGWAGNGLLC(UniMod:4)GR	2	SC(UniMod:4)VC(UniMod:4)AVGWAGNGLLC(UniMod:4)GR2	308461	310606	291622
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	SCVCAVGWAGNGLLCGR	SC(UniMod:4)VC(UniMod:4)AVGWAGNGLLC(UniMod:4)GR	3	SC(UniMod:4)VC(UniMod:4)AVGWAGNGLLC(UniMod:4)GR3	130933	141326	150558
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	SCVDVNECDMGAPCEQR	SC(UniMod:4)VDVNEC(UniMod:4)DMGAPC(UniMod:4)EQR	3	SC(UniMod:4)VDVNEC(UniMod:4)DMGAPC(UniMod:4)EQR3	141327	136289	161708
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	SCVMMQGR	SC(UniMod:4)VMMQGR	2	SC(UniMod:4)VMMQGR2	175169	129175	163515
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	SCVNAIPDQCDPMPCNEDGYLSCK	SC(UniMod:4)VNAIPDQC(UniMod:4)DPMPC(UniMod:4)NEDGYLSC(UniMod:4)K	3	SC(UniMod:4)VNAIPDQC(UniMod:4)DPMPC(UniMod:4)NEDGYLSC(UniMod:4)K3	51156.5	56526.5	53252.6
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	SCVNAIPDQCDPMPCNEDGYLSCK	SC(UniMod:4)VNAIPDQC(UniMod:4)DPMPC(UniMod:4)NEDGYLSC(UniMod:4)K	4	SC(UniMod:4)VNAIPDQC(UniMod:4)DPMPC(UniMod:4)NEDGYLSC(UniMod:4)K4	5089.4	2722.7	7435.92
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	SCVPSGPMQKPK	SC(UniMod:4)VPSGPMQKPK	2	SC(UniMod:4)VPSGPMQKPK2	2984.66	4201.08	1115.48
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	SCVPSGPMQKPK	SC(UniMod:4)VPSGPMQKPK	3	SC(UniMod:4)VPSGPMQKPK3	17938.5	17352.8	29388.4
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	SCVQGAVGMLR	SC(UniMod:4)VQGAVGMLR	2	SC(UniMod:4)VQGAVGMLR2	6620.53	5961.47	3935.9
Q8CGZ2	Q8CGZ2	ADIP_RAT	Ssx2ip	Afadin- and alpha-actinin-binding protein	1	SCVSEHSPVSALTVTPEETKPNEVGR	SC(UniMod:4)VSEHSPVSALTVTPEETKPNEVGR	4	SC(UniMod:4)VSEHSPVSALTVTPEETKPNEVGR4	14104.3	8934.32	8388.4
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	SCVYISSSPDEVALVEGMQR	SC(UniMod:4)VYISSSPDEVALVEGMQR	3	SC(UniMod:4)VYISSSPDEVALVEGMQR3	21348.5	24211.7	28514.3
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	SCWCVDEAGQELDGTR	SC(UniMod:4)WC(UniMod:4)VDEAGQELDGTR	2	SC(UniMod:4)WC(UniMod:4)VDEAGQELDGTR2	7919.59	7673.59	6989.25
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	SCWCVDEAGQELDGTR	SC(UniMod:4)WC(UniMod:4)VDEAGQELDGTR	3	SC(UniMod:4)WC(UniMod:4)VDEAGQELDGTR3	3996.2	3079.1	
O55171	O55171;D3ZIQ1;O88267	ACOT2_RAT	Acot2	Acyl-coenzyme A thioesterase 2, mitochondrial	0	SCWDEPLSITVR	SC(UniMod:4)WDEPLSITVR	2	SC(UniMod:4)WDEPLSITVR2	46018.4	36405.5	52198.9
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	SCWEQHCSVLVK	SC(UniMod:4)WEQHC(UniMod:4)SVLVK	2	SC(UniMod:4)WEQHC(UniMod:4)SVLVK2	4111.25	1108.62	
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	SCWEQHCSVLVK	SC(UniMod:4)WEQHC(UniMod:4)SVLVK	3	SC(UniMod:4)WEQHC(UniMod:4)SVLVK3	16547.2	21830.4	27199.2
O08874	O08874	PKN2_RAT	Pkn2	Serine/threonine-protein kinase N2	1	SCWSVGELEDK	SC(UniMod:4)WSVGELEDK	2	SC(UniMod:4)WSVGELEDK2	5967.71		6480.96
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	SCYDLSCHAR	SC(UniMod:4)YDLSC(UniMod:4)HAR	2	SC(UniMod:4)YDLSC(UniMod:4)HAR2	5597.32	4692.18	6095.01
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	SCYDLSCHAR	SC(UniMod:4)YDLSC(UniMod:4)HAR	3	SC(UniMod:4)YDLSC(UniMod:4)HAR3	49357.6	41695.1	45229.5
Q5I0P2	A0A0G2JYW6;Q5I0P2	GCSH_RAT	Gcsh	Glycine cleavage system H protein, mitochondrial	0	SCYEDGWLIK	SC(UniMod:4)YEDGWLIK	2	SC(UniMod:4)YEDGWLIK2	22418.3		13520.8
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	SCYNLTNPSDSGR	SC(UniMod:4)YNLTNPSDSGR	2	SC(UniMod:4)YNLTNPSDSGR2	21569	12299.6	10147.5
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	SCYQDPVTLQLACVCDPGYIGSR	SC(UniMod:4)YQDPVTLQLAC(UniMod:4)VC(UniMod:4)DPGYIGSR	3	SC(UniMod:4)YQDPVTLQLAC(UniMod:4)VC(UniMod:4)DPGYIGSR3	26250.8	26804.2	21718.5
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	SCYSLADQLELNPDFSRPNR	SC(UniMod:4)YSLADQLELNPDFSRPNR	3	SC(UniMod:4)YSLADQLELNPDFSRPNR3	5275.63	1319.65	
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	SCYSSLHPTSSSIDLELDKPIAATSN	SC(UniMod:4)YSSLHPTSSSIDLELDKPIAATSN	3	SC(UniMod:4)YSSLHPTSSSIDLELDKPIAATSN3	800.696	3792.09	3954.67
P48032	P48032	TIMP3_RAT	Timp3	Metalloproteinase inhibitor 3	1	SCYYLPCFVTSK	SC(UniMod:4)YYLPC(UniMod:4)FVTSK	2	SC(UniMod:4)YYLPC(UniMod:4)FVTSK2	2.04104e+06	2.08856e+06	2.16779e+06
P48032	P48032	TIMP3_RAT	Timp3	Metalloproteinase inhibitor 3	1	SCYYLPCFVTSK	SC(UniMod:4)YYLPC(UniMod:4)FVTSK	3	SC(UniMod:4)YYLPC(UniMod:4)FVTSK3	13789.1	17466.9	10159.1
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	SDAALEEAVAEVLDHRPIEQK	SDAALEEAVAEVLDHRPIEQK	3	SDAALEEAVAEVLDHRPIEQK3	29528.6	41648.6	31038.5
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	SDAALEEAVAEVLDHRPIEQK	SDAALEEAVAEVLDHRPIEQK	4	SDAALEEAVAEVLDHRPIEQK4	87592.8	103106	132381
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	SDACQGDSGGPLVCEK	SDAC(UniMod:4)QGDSGGPLVC(UniMod:4)EK	2	SDAC(UniMod:4)QGDSGGPLVC(UniMod:4)EK2	240725	199466	191390
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	SDACQGDSGGPLVCEK	SDAC(UniMod:4)QGDSGGPLVC(UniMod:4)EK	3	SDAC(UniMod:4)QGDSGGPLVC(UniMod:4)EK3	20191.2	19308.7	20339.3
P55146	P55146	TYRO3_RAT	Tyro3	Tyrosine-protein kinase receptor TYRO3	1	SDAGLYWCQVK	SDAGLYWC(UniMod:4)QVK	2	SDAGLYWC(UniMod:4)QVK2	6790.9	8500.66	12023.4
P08721	P08721	OSTP_RAT	Spp1	Osteopontin	1	SDAIDSQASSK	SDAIDSQASSK	2	SDAIDSQASSK2	231436	266148	258898
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	SDAIYSAR	SDAIYSAR	2	SDAIYSAR2	237391	314858	272051
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	SDALEFQQK	SDALEFQQK	2	SDALEFQQK2	243433	231559	269354
D3ZYB4	D3ZYB4	D3ZYB4_RAT	Lpin2	phosphatidate phosphatase	1	SDALGQILPQLGK	SDALGQILPQLGK	2	SDALGQILPQLGK2	8333.02	5775.29	4516.81
P29598	P29598	UROK_RAT	Plau	Urokinase-type plasminogen activator	1	SDALSLGLGK	SDALSLGLGK	2	SDALSLGLGK2	3760.07	2558.69	2652.48
Q6P503	Q6P503	Q6P503_RAT	Atp6v1d	V-type proton ATPase subunit D	1	SDALTLR	SDALTLR	2	SDALTLR2	11182.5	9679.07	17362.3
P53987	P53987	MOT1_RAT	Slc16a1	Monocarboxylate transporter 1	1	SDANTDLIGGSPK	SDANTDLIGGSPK	2	SDANTDLIGGSPK2	155177	159884	151543
Q08603	Q08603	PGTB2_RAT	Rabggtb	Geranylgeranyl transferase type-2 subunit beta	1	SDAPDTLLLEK	SDAPDTLLLEK	2	SDAPDTLLLEK2	47839.2	48929	53924.1
Q9ERE4	Q9ERE4	GOLP3_RAT	Golph3	Golgi phosphoprotein 3	1	SDAPTGDVLLDEALK	SDAPTGDVLLDEALK	2	SDAPTGDVLLDEALK2	19086.4	17493.4	17898.7
A0A8J8YRV3	A0A8J8YRV3	A0A8J8YRV3_RAT	Drg1	Developmentally regulated GTP binding protein 1	1	SDATADDLIDVVEGNR	SDATADDLIDVVEGNR	2	SDATADDLIDVVEGNR2	27615.6	12869.4	13552.1
A0A8J8YRV3	A0A8J8YRV3	A0A8J8YRV3_RAT	Drg1	Developmentally regulated GTP binding protein 1	1	SDATADDLIDVVEGNR	SDATADDLIDVVEGNR	3	SDATADDLIDVVEGNR3		3616.91	
Q6AY97	Q6AY97	CCD91_RAT	Ccdc91	Coiled-coil domain-containing protein 91	1	SDAVISSPDDTR	SDAVISSPDDTR	2	SDAVISSPDDTR2	17169.9	7829.18	6859.53
P20411	P20411	FCERG_RAT	Fcer1g	High affinity immunoglobulin epsilon receptor subunit gamma	1	SDAVYTGLNTR	SDAVYTGLNTR	2	SDAVYTGLNTR2	2.19057e+06	2.15022e+06	2.1152e+06
M0RD40	M0RD40	M0RD40_RAT	Sik3	non-specific serine/threonine protein kinase	1	SDAYDHYSAIYSLLCDR	SDAYDHYSAIYSLLC(UniMod:4)DR	3	SDAYDHYSAIYSLLC(UniMod:4)DR3	10679.4	13816	
D3ZXI3	D3ZXI3	D3ZXI3_RAT	Notum	NOTUM, palmitoleoyl-protein carboxylesterase	1	SDCIDTINCAPTEAIR	SDC(UniMod:4)IDTINC(UniMod:4)APTEAIR	2	SDC(UniMod:4)IDTINC(UniMod:4)APTEAIR2	4303.44		3534.38
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	SDCSLCLAADPAYR	SDC(UniMod:4)SLC(UniMod:4)LAADPAYR	2	SDC(UniMod:4)SLC(UniMod:4)LAADPAYR2	39923.6	27111	37541.5
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	SDCSLCLAADPAYR	SDC(UniMod:4)SLC(UniMod:4)LAADPAYR	3	SDC(UniMod:4)SLC(UniMod:4)LAADPAYR3		7131.28	6116.27
A0A8I6ASZ5	A0A8I6ASZ5	A0A8I6ASZ5_RAT	Tcf25	Transcription factor 25	1	SDCTLPDSASSGNK	SDC(UniMod:4)TLPDSASSGNK	2	SDC(UniMod:4)TLPDSASSGNK2	9186.37	9447.25	10037.1
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	SDCTYIVLNGR	SDC(UniMod:4)TYIVLNGR	2	SDC(UniMod:4)TYIVLNGR2	4518.45	6419.29	4270.08
P01244	P01244	SOMA_RAT	Gh1	Somatotropin	1	SDDALLK	SDDALLK	2	SDDALLK2		6562.41	10716.4
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	SDDDSPGDESYPR	SDDDSPGDESYPR	2	SDDDSPGDESYPR2	2944.84		
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	SDDELLSSK	SDDELLSSK	2	SDDELLSSK2	5131.71		3148.97
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	SDDESHLQQQMPWGNR	SDDESHLQQQMPWGNR	3	SDDESHLQQQMPWGNR3	30311.2	41810.5	28732.3
P85411	P85411	KTDAP_RAT	Krtdap	Keratinocyte differentiation-associated protein	1	SDDFLNWHVLTDMFK	SDDFLNWHVLTDMFK	2	SDDFLNWHVLTDMFK2	3167.41		
P85411	P85411	KTDAP_RAT	Krtdap	Keratinocyte differentiation-associated protein	1	SDDFLNWHVLTDMFK	SDDFLNWHVLTDMFK	3	SDDFLNWHVLTDMFK3	27397.4	29672.3	40061.6
P85411	P85411	KTDAP_RAT	Krtdap	Keratinocyte differentiation-associated protein	1	SDDFLNWHVLTDMFKK	SDDFLNWHVLTDMFKK	3	SDDFLNWHVLTDMFKK3	1434.44	4329.58	5295.67
P85411	P85411	KTDAP_RAT	Krtdap	Keratinocyte differentiation-associated protein	1	SDDFLNWHVLTDMFKK	SDDFLNWHVLTDMFKK	4	SDDFLNWHVLTDMFKK4	2484.68	4743.41	
D3ZWA8	D3ZWA8	D3ZWA8_RAT	Appl1	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1	1	SDDHPDVVYETMR	SDDHPDVVYETMR	3	SDDHPDVVYETMR3	8426.6	5532.6	3909.88
Q8K4C0	Q8K4C0	FMO5_RAT	Fmo5	Flavin-containing monooxygenase 5	1	SDDIGGLWR	SDDIGGLWR	2	SDDIGGLWR2	29377.5	34611.2	30886.1
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	SDDIYNQVSAYPLPEHR	SDDIYNQVSAYPLPEHR	3	SDDIYNQVSAYPLPEHR3	27625.3	26433.2	19446.2
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	SDDLGKDLTTVNR	SDDLGKDLTTVNR	2	SDDLGKDLTTVNR2	1056.54	5648.53	5739.57
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	SDDLGKDLTTVNR	SDDLGKDLTTVNR	3	SDDLGKDLTTVNR3	30401.7	24690.4	23434.6
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	SDDRDHLNSLQALMK	SDDRDHLNSLQALMK	4	SDDRDHLNSLQALMK4	13982.7	15739.3	9555.3
Q6P799	Q6P799	SYSC_RAT	Sars1	Serine--tRNA ligase, cytoplasmic	1	SDDSSYDEK	SDDSSYDEK	2	SDDSSYDEK2			1726.46
Q6AYP5	Q6AYP5	CADM1_RAT	Cadm1	Cell adhesion molecule 1	1	SDDSVIQLLNPNR	SDDSVIQLLNPNR	2	SDDSVIQLLNPNR2	40146.5	33710.1	36658.4
M0RCL7	M0RCL7	M0RCL7_RAT	ENSRNOG00000069838	Ig-like domain-containing protein	1	SDDTAIYYCTR	SDDTAIYYC(UniMod:4)TR	2	SDDTAIYYC(UniMod:4)TR2	173689	135697	124662
M0RCL7	M0RCL7	M0RCL7_RAT	ENSRNOG00000069838	Ig-like domain-containing protein	1	SDDTAIYYCTR	SDDTAIYYC(UniMod:4)TR	3	SDDTAIYYC(UniMod:4)TR3	5894.19	6693.18	10826.7
Q8R2E7	Q8R2E7	Q8R2E7_RAT	Fadd	FAS-associated death domain protein	1	SDDTSSALR	SDDTSSALR	2	SDDTSSALR2	2344.32	4880.53	
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	SDDVPAPK	SDDVPAPK	1	SDDVPAPK1	1.09085e+06	1.22771e+06	965133
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	SDDVPAPK	SDDVPAPK	2	SDDVPAPK2	1.47082e+07	1.70489e+07	1.41327e+07
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	SDDVPAPKDLQFVEVTDVK	SDDVPAPKDLQFVEVTDVK	3	SDDVPAPKDLQFVEVTDVK3	59763	132316	69477.3
F1MAL5	F1MAL5	F1MAL5_RAT	Irs2	Insulin receptor substrate 2	1	SDDYMPMSPTSVSAPK	SDDYMPMSPTSVSAPK	2	SDDYMPMSPTSVSAPK2	2371.39	6789.38	7503.88
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	SDEALKPLGVK	SDEALKPLGVK	2	SDEALKPLGVK2	3100.78		647.205
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	SDEALKPLGVK	SDEALKPLGVK	3	SDEALKPLGVK3	28903.1	27135.4	26017.6
D4ADE8	D4ADE8;A0A8I6A7A4	D4ADE8_RAT	Ddx3x	RNA helicase	0	SDEDDWSKPLPPSER	SDEDDWSKPLPPSER	3	SDEDDWSKPLPPSER3	9892.24	15094.5	12352.1
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	SDEDEQHLHVK	SDEDEQHLHVK	2	SDEDEQHLHVK2	140238	119172	
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	SDEDEQHLHVK	SDEDEQHLHVK	3	SDEDEQHLHVK3	1.3862e+06	1.43501e+06	1.77522e+06
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	SDEDKDKEGEALEVK	SDEDKDKEGEALEVK	3	SDEDKDKEGEALEVK3	22416.9	12685.4	22288.8
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	SDEDKDKEGEALEVK	SDEDKDKEGEALEVK	4	SDEDKDKEGEALEVK4	31573	22517.4	33433.6
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	SDEDYLYREELAR	SDEDYLYREELAR	3	SDEDYLYREELAR3	39012.4	47729.8	32725.1
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	SDEEMDGGVDDLK	SDEEMDGGVDDLK	2	SDEEMDGGVDDLK2	1919.5		5362.35
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	SDEENLFEIITADEVHYYMQAATAK	SDEENLFEIITADEVHYYMQAATAK	3	SDEENLFEIITADEVHYYMQAATAK3	243160	173831	30339.4
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	SDEENLFEIITADEVHYYMQAATAK	SDEENLFEIITADEVHYYMQAATAK	4	SDEENLFEIITADEVHYYMQAATAK4	11664	23787.1	13632.8
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	SDEEYRELFDLALR	SDEEYRELFDLALR	3	SDEEYRELFDLALR3	6277.47	10865.6	5174.14
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	SDEGHPFR	SDEGHPFR	2	SDEGHPFR2		207901	
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	SDEGVAAPASGGPAR	SDEGVAAPASGGPAR	2	SDEGVAAPASGGPAR2	38832.7	37265.8	34929.1
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	SDEHVDIR	SDEHVDIR	2	SDEHVDIR2	11022	7523.78	2119.1
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	SDEIHLQK	SDEIHLQK	2	SDEIHLQK2	18948	19082.6	17776.9
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	SDEIHWLHPQMTVGEVQDK	SDEIHWLHPQMTVGEVQDK	4	SDEIHWLHPQMTVGEVQDK4	25623.9	18900.9	18508.6
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	SDEKPSYCNSR	SDEKPSYC(UniMod:4)NSR	2	SDEKPSYC(UniMod:4)NSR2			84833
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	SDEKPSYCNSR	SDEKPSYC(UniMod:4)NSR	3	SDEKPSYC(UniMod:4)NSR3	40312.4		18684.8
Q66HF2	Q66HF2	TM9S1_RAT	Tm9sf1	Transmembrane 9 superfamily member 1	1	SDELLGLTHTYSVR	SDELLGLTHTYSVR	3	SDELLGLTHTYSVR3	18480.6	17724.6	14362.6
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	SDELTFCR	SDELTFC(UniMod:4)R	2	SDELTFC(UniMod:4)R2	14085.4	18640.1	15365.8
Q64119	Q64119	MYL6_RAT	Myl6	Myosin light polypeptide 6	1	SDEMNVK	SDEMNVK	1	SDEMNVK1	257476	216937	263246
Q64119	Q64119	MYL6_RAT	Myl6	Myosin light polypeptide 6	1	SDEMNVK	SDEMNVK	2	SDEMNVK2		6.86035e+06	7.28204e+06
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	SDEVGDGYACYGHLLHEVQR	SDEVGDGYAC(UniMod:4)YGHLLHEVQR	3	SDEVGDGYAC(UniMod:4)YGHLLHEVQR3	4476.23	4311.6	3926.51
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	SDEVGDGYACYGHLLHEVQR	SDEVGDGYAC(UniMod:4)YGHLLHEVQR	4	SDEVGDGYAC(UniMod:4)YGHLLHEVQR4	6290.75		4757.82
Q5I0D1	Q5I0D1	GLOD4_RAT	Glod4	Glyoxalase domain-containing protein 4	1	SDEWFATR	SDEWFATR	2	SDEWFATR2	18475.7	14421.5	19890.5
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	SDFCWCVDK	SDFC(UniMod:4)WC(UniMod:4)VDK	2	SDFC(UniMod:4)WC(UniMod:4)VDK2	10230.3	3927.51	8285.09
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	SDFCWCVDKDGR	SDFC(UniMod:4)WC(UniMod:4)VDKDGR	2	SDFC(UniMod:4)WC(UniMod:4)VDKDGR2	1710.77	2896.49	3011.88
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	SDFCWCVDKDGR	SDFC(UniMod:4)WC(UniMod:4)VDKDGR	3	SDFC(UniMod:4)WC(UniMod:4)VDKDGR3	38185.6	67860.5	59723.4
E9PTK4	E9PTK4	E9PTK4_RAT	Thnsl1	Threonine synthase-like 1	1	SDFDFCQAAIR	SDFDFC(UniMod:4)QAAIR	2	SDFDFC(UniMod:4)QAAIR2	5541.85	10222.8	12104.6
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	SDFDFSDPK	SDFDFSDPK	2	SDFDFSDPK2	11899.5	9841.51	11745.6
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	SDFDMVDYLNELR	SDFDMVDYLNELR	2	SDFDMVDYLNELR2	21006	17301	20661.4
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	SDFDMVDYLNELR	SDFDMVDYLNELR	3	SDFDMVDYLNELR3			5180.1
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	SDFDPGQDTYQHPPK	SDFDPGQDTYQHPPK	2	SDFDPGQDTYQHPPK2	24044.8	13951.8	18516.8
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	SDFDPGQDTYQHPPK	SDFDPGQDTYQHPPK	3	SDFDPGQDTYQHPPK3	289908	291409	303450
Q5PQX1	Q5PQX1	TOIP1_RAT	Tor1aip1	Torsin-1A-interacting protein 1	1	SDFGNQSPSTSR	SDFGNQSPSTSR	2	SDFGNQSPSTSR2	17192.5	21176.2	17183.9
A1KQY6	A1KQY6	A1KQY6_RAT	St8sia4	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	1	SDFITMNPSVVQR	SDFITMNPSVVQR	2	SDFITMNPSVVQR2	72535.4	79164.9	64877.1
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	SDFIYVVDTR	SDFIYVVDTR	2	SDFIYVVDTR2	11128.3	10960.7	14527
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	SDFIYVVDTRPK	SDFIYVVDTRPK	2	SDFIYVVDTRPK2	19868.7	21552.3	23459.7
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	SDFIYVVDTRPK	SDFIYVVDTRPK	3	SDFIYVVDTRPK3	69905.3	84057.2	73812.1
F1LWX9	F1LWX9	F1LWX9_RAT	Tmem117	Transmembrane protein 117	1	SDFNEIVYK	SDFNEIVYK	2	SDFNEIVYK2	33942.8	39895.2	33688.6
A0A8I6AT07	A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	1	SDFQEACVFK	SDFQEAC(UniMod:4)VFK	2	SDFQEAC(UniMod:4)VFK2	4083.07	6558.59	
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	SDFQVNLNNASR	SDFQVNLNNASR	2	SDFQVNLNNASR2	42133.1	41185.5	19882.1
P22273	P22273	IL6RA_RAT	Il6r	Interleukin-6 receptor subunit alpha	1	SDFQVPCQYSQQLK	SDFQVPC(UniMod:4)QYSQQLK	2	SDFQVPC(UniMod:4)QYSQQLK2	64106.7	53186.4	61873
P22273	P22273	IL6RA_RAT	Il6r	Interleukin-6 receptor subunit alpha	1	SDFQVPCQYSQQLK	SDFQVPC(UniMod:4)QYSQQLK	3	SDFQVPC(UniMod:4)QYSQQLK3	7464.71	5480.4	14025.9
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	SDFSNEER	SDFSNEER	2	SDFSNEER2	3.25936e+06	3.56084e+06	3.77749e+06
D3Z9K5	D3Z9K5	D3Z9K5_RAT	Wfikkn2	WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2	1	SDFVILGR	SDFVILGR	2	SDFVILGR2	5234.85		4870.88
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	SDFYEIMR	SDFYEIMR	2	SDFYEIMR2	8632.12	8006.33	7066.13
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	SDGAAIPR	SDGAAIPR	2	SDGAAIPR2	63573.6	63959.1	79210
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	SDGAELLMFLNHMEK	SDGAELLMFLNHMEK	3	SDGAELLMFLNHMEK3	4330.21		5659.1
Q9JKC9	Q9JKC9	SYNRG_RAT	Synrg	Synergin gamma	1	SDGDFADFHSSK	SDGDFADFHSSK	3	SDGDFADFHSSK3	9045.53	6086.13	
D4AE50	D4AE50	D4AE50_RAT	Nfx1	Nuclear transcription factor, X-box binding 1	1	SDGFGDFSCLK	SDGFGDFSC(UniMod:4)LK	2	SDGFGDFSC(UniMod:4)LK2	5797.78		6353.53
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	SDGFSIETCK	SDGFSIETC(UniMod:4)K	2	SDGFSIETC(UniMod:4)K2	1.59859e+06	1.67737e+06	1.87562e+06
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	SDGGYTYDTSDLAAIK	SDGGYTYDTSDLAAIK	2	SDGGYTYDTSDLAAIK2	55592.6	58354.7	51348.3
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	SDGIPMYK	SDGIPMYK	2	SDGIPMYK2	194063	176517	174114
P38983	A0A8I5ZZE2;P38983	RSSA_RAT	Rpsa	Small ribosomal subunit protein uS2	0	SDGIYIINLK	SDGIYIINLK	2	SDGIYIINLK2	78166.9	63217.1	69474
P30121	P30121	TIMP2_RAT	Timp2	Metalloproteinase inhibitor 2	1	SDGSCAWYR	SDGSC(UniMod:4)AWYR	2	SDGSC(UniMod:4)AWYR2	7775.86	5392.36	8443.86
P47197	P47197	AKT2_RAT	Akt2	RAC-beta serine/threonine-protein kinase	1	SDGSFIGYK	SDGSFIGYK	2	SDGSFIGYK2	9459.16	6530.98	7194.28
Q7TNK0	Q7TNK0	SERC1_RAT	Serinc1	Serine incorporator 1	1	SDGSLDDGEGVHR	SDGSLDDGEGVHR	3	SDGSLDDGEGVHR3	3908.73	4401.2	3600.66
Q4QR85	Q4QR85	MEP50_RAT	Wdr77	Methylosome protein WDR77	1	SDGSLLLGASSLSGR	SDGSLLLGASSLSGR	2	SDGSLLLGASSLSGR2	55414.8	43552.6	46604.2
Q4QR85	Q4QR85	MEP50_RAT	Wdr77	Methylosome protein WDR77	1	SDGSLLLGASSLSGR	SDGSLLLGASSLSGR	3	SDGSLLLGASSLSGR3		1749.6	
A0A096MJ11	A0A096MJ11	A0A096MJ11_RAT	Gsdmd	Gasdermin D	1	SDGTNEEEVIR	SDGTNEEEVIR	2	SDGTNEEEVIR2	2714.68	2994.3	3254.26
A0A096MJ11	A0A096MJ11	A0A096MJ11_RAT	Gsdmd	Gasdermin D	1	SDGTNEEEVIREDFQGLR	SDGTNEEEVIREDFQGLR	3	SDGTNEEEVIREDFQGLR3	26144.2	29055.4	28768.3
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	SDGTYLVR	SDGTYLVR	2	SDGTYLVR2	27611.7	46131.3	21950.4
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	SDHAAACLR	SDHAAAC(UniMod:4)LR	2	SDHAAAC(UniMod:4)LR2	4452.69		7641.93
Q99P75	Q99P75	RAB9A_RAT	Rab9a	Ras-related protein Rab-9A	1	SDHLIQTDTVNLHR	SDHLIQTDTVNLHR	3	SDHLIQTDTVNLHR3	3142.33		
Q99P75	Q99P75	RAB9A_RAT	Rab9a	Ras-related protein Rab-9A	1	SDHLIQTDTVNLHR	SDHLIQTDTVNLHR	4	SDHLIQTDTVNLHR4	5521.51	8793.32	13119.9
A0A8J8Y8E0	A0A8J8Y8E0	A0A8J8Y8E0_RAT	Fibp	FGF1 intracellular binding protein	1	SDHWPLSDVR	SDHWPLSDVR	3	SDHWPLSDVR3	13459	14353.6	14883.1
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	SDIATLLK	SDIATLLK	2	SDIATLLK2	153800	198145	179941
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	SDIDECR	SDIDEC(UniMod:4)R	2	SDIDEC(UniMod:4)R2	61037.8	104405	85497.2
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	SDIDEIVLVGGSTR	SDIDEIVLVGGSTR	2	SDIDEIVLVGGSTR2	1.22485e+06	1.28652e+06	1.15821e+06
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	SDIDEIVLVGGSTR	SDIDEIVLVGGSTR	3	SDIDEIVLVGGSTR3	252910	247078	260356
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	SDIDLLEEHK	SDIDLLEEHK	2	SDIDLLEEHK2	31288	29068.7	25468.6
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	SDIDLLEEHK	SDIDLLEEHK	3	SDIDLLEEHK3	62804	73528	70618.1
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	SDIEENGAVEIAR	SDIEENGAVEIAR	2	SDIEENGAVEIAR2	46086.3	45218.2	68107.4
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	SDIEIENGFLSQSDSK	SDIEIENGFLSQSDSK	2	SDIEIENGFLSQSDSK2	139405	112564	104650
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	SDIEIENGFLSQSDSK	SDIEIENGFLSQSDSK	3	SDIEIENGFLSQSDSK3	23703.6	12806.2	11361.6
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	SDIFEAQETESGVLGTMK	SDIFEAQETESGVLGTMK	2	SDIFEAQETESGVLGTMK2	6078.47	11131.8	7777.06
Q5RKH9	Q5RKH9	Q5RKH9_RAT	Derl1	Derlin	1	SDIGDWFR	SDIGDWFR	2	SDIGDWFR2	23421.1	29204.8	19597.9
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	SDIGEVILVGGMTR	SDIGEVILVGGMTR	2	SDIGEVILVGGMTR2	60192.7	53245.3	60470.4
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	SDIGEVILVGGMTR	SDIGEVILVGGMTR	3	SDIGEVILVGGMTR3	13479	14126.7	10543.8
Q6AYI8	Q6AYI8	Q6AYI8_RAT	Edem2	alpha-1,2-Mannosidase	1	SDIGLVGNHIDVLTGK	SDIGLVGNHIDVLTGK	3	SDIGLVGNHIDVLTGK3	7450.27	7502.89	6952.96
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	SDIHTEAVQAALAK	SDIHTEAVQAALAK	3	SDIHTEAVQAALAK3	13331.8	14572	13640.2
Q63515	Q63515	C4BPB_RAT	C4bpb	C4b-binding protein beta chain	1	SDILLNYHS	SDILLNYHS	2	SDILLNYHS2	255798	300229	214359
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	SDIQNSDK	SDIQNSDK	1	SDIQNSDK1			1769.57
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	SDIQNSDK	SDIQNSDK	2	SDIQNSDK2			105429
F7EUW3	F7EUW3	F7EUW3_RAT	C2cd2l	C2CD2-like	1	SDISERPSVDDVESETGSTGALETR	SDISERPSVDDVESETGSTGALETR	3	SDISERPSVDDVESETGSTGALETR3	12844.6	15486.9	15649.8
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	SDISPLTPR	SDISPLTPR	2	SDISPLTPR2	14824.6	16853.3	19313.6
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	SDISSHPPVEGAYAPR	SDISSHPPVEGAYAPR	2	SDISSHPPVEGAYAPR2	20718.8	15084.2	6499.78
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	SDISSHPPVEGAYAPR	SDISSHPPVEGAYAPR	3	SDISSHPPVEGAYAPR3	108409	100094	114362
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	SDIVDNLDEDRLR	SDIVDNLDEDRLR	3	SDIVDNLDEDRLR3	2925.2	8981.89	
P09760	P09760	FER_RAT	Fer	Tyrosine-protein kinase Fer	1	SDIVLLLGQK	SDIVLLLGQK	2	SDIVLLLGQK2	11698.9	6205.95	4814.54
Q80VJ4	Q80VJ4	GPCP1_RAT	Gpcpd1	Glycerophosphocholine phosphodiesterase GPCPD1	1	SDIYPELMDLR	SDIYPELMDLR	2	SDIYPELMDLR2	31663.1	26734.3	30244.9
Q7TNZ6	Q7TNZ6	STRAA_RAT	Strada	STE20-related kinase adapter protein alpha	1	SDIYSVGITACELANGHVPFK	SDIYSVGITAC(UniMod:4)ELANGHVPFK	3	SDIYSVGITAC(UniMod:4)ELANGHVPFK3	8380.36	5490.99	4093.64
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	SDIYVCMISFAHNVAAQGK	SDIYVC(UniMod:4)MISFAHNVAAQGK	3	SDIYVC(UniMod:4)MISFAHNVAAQGK3	11969	18326.8	16286.9
P50398	P50398	GDIA_RAT	Gdi1	Rab GDP dissociation inhibitor alpha	1	SDIYVCMISYAHNVAAQGK	SDIYVC(UniMod:4)MISYAHNVAAQGK	3	SDIYVC(UniMod:4)MISYAHNVAAQGK3	40225	38359	35635.2
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	SDKDLETQVIQLNEQVHSLK	SDKDLETQVIQLNEQVHSLK	3	SDKDLETQVIQLNEQVHSLK3	242478	234878	242289
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	SDKDLETQVIQLNEQVHSLK	SDKDLETQVIQLNEQVHSLK	4	SDKDLETQVIQLNEQVHSLK4	368127	435281	449025
D3ZIS7	D3ZIS7	D3ZIS7_RAT	C18h5orf46	Similar to AVLV472	1	SDKPDDSKNPEPGFPK	SDKPDDSKNPEPGFPK	3	SDKPDDSKNPEPGFPK3	51665.3	63614.2	65907.8
D3ZIS7	D3ZIS7	D3ZIS7_RAT	C18h5orf46	Similar to AVLV472	1	SDKPDDSKNPEPGFPK	SDKPDDSKNPEPGFPK	4	SDKPDDSKNPEPGFPK4	76145.2	91300.9	104446
Q53B90	Q53B90	RAB43_RAT	Rab43	Ras-related protein Rab-43	1	SDLADLR	SDLADLR	2	SDLADLR2	21881.6	15766.3	14987.4
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	SDLDAVSVK	SDLDAVSVK	2	SDLDAVSVK2	49364.8	42978.7	36725.4
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	SDLDDVDP	SDLDDVDP	1	SDLDDVDP1	9870.98	18209.1	14219.1
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	SDLDLDAK	SDLDLDAK	2	SDLDLDAK2	14540.3	10860.9	12184
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	SDLDRLEYSILSGNDHK	SDLDRLEYSILSGNDHK	3	SDLDRLEYSILSGNDHK3	29434.1	33720.1	30617.4
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	SDLDRLEYSILSGNDHK	SDLDRLEYSILSGNDHK	4	SDLDRLEYSILSGNDHK4	31826	29289.5	32259.7
P23640	P23640	RB27A_RAT	Rab27a	Ras-related protein Rab-27A	1	SDLEDQR	SDLEDQR	2	SDLEDQR2	190814	214043	217272
G3V784	G3V784	G3V784_RAT	Adpgk	ADP-dependent glucokinase	1	SDLEEAFVHFMGK	SDLEEAFVHFMGK	2	SDLEEAFVHFMGK2	4564.16	6087.43	
G3V784	G3V784	G3V784_RAT	Adpgk	ADP-dependent glucokinase	1	SDLEEAFVHFMGK	SDLEEAFVHFMGK	3	SDLEEAFVHFMGK3	15251.7	13933.1	11557.8
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	SDLEFEALK	SDLEFEALK	2	SDLEFEALK2	59282.9	60796.8	46055.7
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	SDLEFEALKTPDLDVPK	SDLEFEALKTPDLDVPK	2	SDLEFEALKTPDLDVPK2	7207.06	7154.34	11904
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	SDLEFEALKTPDLDVPK	SDLEFEALKTPDLDVPK	3	SDLEFEALKTPDLDVPK3	70210.5	82897.5	65930.9
Q5U4F3	Q5U4F3	F107B_RAT	Fam107b	Protein FAM107B	1	SDLEIELLK	SDLEIELLK	2	SDLEIELLK2	18324.1	13502.1	15704.3
Q5U4F3	Q5U4F3	F107B_RAT	Fam107b	Protein FAM107B	1	SDLEIELLKR	SDLEIELLKR	3	SDLEIELLKR3	9491.44	13309.3	10596.4
Q63369	Q63369	NFKB1_RAT	Nfkb1	Nuclear factor NF-kappa-B p105 subunit	1	SDLETSEPKPFLYYPEIK	SDLETSEPKPFLYYPEIK	3	SDLETSEPKPFLYYPEIK3	4953.18	10933.5	7388.42
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	SDLETVVHQLEQEK	SDLETVVHQLEQEK	3	SDLETVVHQLEQEK3	5187.41	6244.22	16710.1
P08650	P08650	CO5_RAT	C5	Complement C5	1	SDLGCGAGGGR	SDLGC(UniMod:4)GAGGGR	2	SDLGC(UniMod:4)GAGGGR2	577680	462562	459942
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	SDLGNLLK	SDLGNLLK	2	SDLGNLLK2	12827.3	13849.6	9149.45
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	SDLGQLDDEMK	SDLGQLDDEMK	2	SDLGQLDDEMK2	38563.1	31230.5	31516.3
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	SDLGYSSLCK	SDLGYSSLC(UniMod:4)K	2	SDLGYSSLC(UniMod:4)K2	32414.2	42909.9	34092.4
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	SDLHNLVELFEAEKER	SDLHNLVELFEAEKER	4	SDLHNLVELFEAEKER4	6637.88	5079.3	
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	SDLICAPK	SDLIC(UniMod:4)APK	1	SDLIC(UniMod:4)APK1	17829.3	17156.6	11810.4
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	SDLICAPK	SDLIC(UniMod:4)APK	2	SDLIC(UniMod:4)APK2	955437	943142	933403
M0R6S5	M0R6S5	M0R6S5_RAT	Chsy3	Hexosyltransferase	1	SDLLGAGGFDTSIQGWGLEDVDLYNK	SDLLGAGGFDTSIQGWGLEDVDLYNK	3	SDLLGAGGFDTSIQGWGLEDVDLYNK3	10279	11113	12397.6
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	SDLLLSGR	SDLLLSGR	2	SDLLLSGR2	55562.7	67250.8	58959.3
Q5FWU0	Q5FWU0	Q5FWU0_RAT	Wasf2	Wiskott-Aldrich syndrome protein family member	1	SDLLSAIR	SDLLSAIR	2	SDLLSAIR2	405616	407694	397340
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	SDLPGPGIMR	SDLPGPGIMR	2	SDLPGPGIMR2	38084	37920.6	30333.6
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	SDLPQSQPISGTLDPDVK	SDLPQSQPISGTLDPDVK	2	SDLPQSQPISGTLDPDVK2	35631.4	32857.8	40290.7
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	SDLPQSQPISGTLDPDVK	SDLPQSQPISGTLDPDVK	3	SDLPQSQPISGTLDPDVK3	7536.53	6325.11	10455.4
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	SDLQMAVLSFEK	SDLQMAVLSFEK	2	SDLQMAVLSFEK2	20168	23875.2	24632.6
Q63481	Q63481	RAB7L_RAT	Rab29	Ras-related protein Rab-7L1	1	SDLSPWAVSR	SDLSPWAVSR	2	SDLSPWAVSR2	116851	99246.8	117890
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	SDLVSWFK	SDLVSWFK	2	SDLVSWFK2	60383.4	49429	49835.4
Q63372	Q63372	NRX1A_RAT	Nrxn1	Neurexin-1	1	SDLYIGGVAK	SDLYIGGVAK	2	SDLYIGGVAK2	18003.4	16276.2	16840
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	SDLYNCFYAIMNK	SDLYNC(UniMod:4)FYAIMNK	2	SDLYNC(UniMod:4)FYAIMNK2	17837.2	28446.5	15762.2
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	SDLYNCFYAIMNK	SDLYNC(UniMod:4)FYAIMNK	3	SDLYNC(UniMod:4)FYAIMNK3	5169.17	6981.48	6066.76
A0A140TAA1	A0A140TAA1	A0A140TAA1_RAT	Igsf8	Immunoglobulin superfamily, member 8	1	SDMAVEAGAPYAER	SDMAVEAGAPYAER	2	SDMAVEAGAPYAER2	5497.05	8351.53	9300.48
P85515	F7F067;P85515	ACTZ_RAT	Actr1a	Alpha-centractin	0	SDMDLRR	SDMDLRR	2	SDMDLRR2	6666.35	12165.4	11674.8
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	SDMDQIVNSK	SDMDQIVNSK	2	SDMDQIVNSK2	41615.7	47374.1	48891.9
Q5RK08	Q5RK08	Q5RK08_RAT	Nipsnap2	Glioblastoma amplified sequence	1	SDMLLSR	SDMLLSR	2	SDMLLSR2	106460	112059	119600
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	SDMNTVLNYIFSHAQVTK	SDMNTVLNYIFSHAQVTK	3	SDMNTVLNYIFSHAQVTK3		6273.72	
D3ZRC4	D3ZRC4	PLPL8_RAT	Pnpla8	Calcium-independent phospholipase A2-gamma	1	SDMYEGLPFFSK	SDMYEGLPFFSK	2	SDMYEGLPFFSK2	14653.3	8216.83	14948.6
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	SDNDMFK	SDNDMFK	2	SDNDMFK2	11025.3	12909.3	17075.2
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	SDNQILTEIVEAK	SDNQILTEIVEAK	2	SDNQILTEIVEAK2	33311.1	39321.8	41183.9
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	SDNQILTEIVEAK	SDNQILTEIVEAK	3	SDNQILTEIVEAK3	2448.44	2464.72	3115.47
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	SDNSFNQELLK	SDNSFNQELLK	2	SDNSFNQELLK2	13148.8	18912.7	18000.6
F7FL34	F7FL34	F7FL34_RAT	Ceacam4	CEA cell adhesion molecule 4	1	SDNVHQTGPAYSGR	SDNVHQTGPAYSGR	3	SDNVHQTGPAYSGR3	11173.7	7132.3	16690.9
Q64303	Q64303	PAK2_RAT	Pak2	Serine/threonine-protein kinase PAK 2	1	SDNVLLGMEGSVK	SDNVLLGMEGSVK	2	SDNVLLGMEGSVK2	28305.9	13731.8	25443
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	SDPDHLAELVK	SDPDHLAELVK	2	SDPDHLAELVK2	10370.1	11373.6	12338.9
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	SDPDHLAELVK	SDPDHLAELVK	3	SDPDHLAELVK3	55973.7	44505.7	54121.4
D4A1R8	D4A1R8	CPNE1_RAT	Cpne1	Copine-1	1	SDPFLEFFR	SDPFLEFFR	2	SDPFLEFFR2	49370.4	41426.2	38683.4
D3ZVY9	D3ZVY9	D3ZVY9_RAT	Gng14	Guanine nucleotide-binding protein subunit gamma	1	SDPFLVGIPAATNPFK	SDPFLVGIPAATNPFK	2	SDPFLVGIPAATNPFK2	6006.98		15463.3
A0JPJ7	A0JPJ7	OLA1_RAT	Ola1	Obg-like ATPase 1	1	SDPGALVIPFSGALELK	SDPGALVIPFSGALELK	2	SDPGALVIPFSGALELK2	15451.4	17190.4	23304.2
A0A8I5YC01	A0A8I5YC01	A0A8I5YC01_RAT	Gimap1	GTPase, IMAP family member 1	1	SDPGCVEAAR	SDPGC(UniMod:4)VEAAR	2	SDPGC(UniMod:4)VEAAR2	65613.1	64799.1	60788.7
D4A5G8	D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	SDPIMLLK	SDPIMLLK	1	SDPIMLLK1	3671.59	4443.61	2367.96
D4A5G8	D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	SDPIMLLK	SDPIMLLK	2	SDPIMLLK2	221769	254461	262464
D3ZLA3	D3ZLA3	D3ZLA3_RAT	Cpne3	Copine 3	1	SDPLCVLFLNTSGQQWYEVER	SDPLC(UniMod:4)VLFLNTSGQQWYEVER	3	SDPLC(UniMod:4)VLFLNTSGQQWYEVER3	3988.93	4049.87	
G3V6P8	G3V6P8	G3V6P8_RAT	Gng12	Guanine nucleotide-binding protein subunit gamma	1	SDPLLMGIPTSENPFK	SDPLLMGIPTSENPFK	2	SDPLLMGIPTSENPFK2	216556	199263	215559
G3V6P8	G3V6P8	G3V6P8_RAT	Gng12	Guanine nucleotide-binding protein subunit gamma	1	SDPLLMGIPTSENPFK	SDPLLMGIPTSENPFK	3	SDPLLMGIPTSENPFK3	4792.38	4503.79	10402
G3V6P8	G3V6P8	G3V6P8_RAT	Gng12	Guanine nucleotide-binding protein subunit gamma	1	SDPLLMGIPTSENPFKDK	SDPLLMGIPTSENPFKDK	3	SDPLLMGIPTSENPFKDK3	50429.4	63806	65490.5
A0A8I5ZMX2	A0A8I5ZMX2	A0A8I5ZMX2_RAT	Adamts3	ADAM metallopeptidase with thrombospondin type 1, motif 3	1	SDPNHAEHHDHAIFLTR	SDPNHAEHHDHAIFLTR	4	SDPNHAEHHDHAIFLTR4	11745.9	5640.99	17835.7
P15978	P16391;P15978	HA11_RAT	RT1-Aw2	Class I histocompatibility antigen, Non-RT1.A alpha-1 chain	0	SDPPEAHVTLHPR	SDPPEAHVTLHPR	3	SDPPEAHVTLHPR3	55618.1	28923.7	32789.7
P15978	P16391;P15978	HA11_RAT	RT1-Aw2	Class I histocompatibility antigen, Non-RT1.A alpha-1 chain	0	SDPPEAHVTLHPRPEGDVTLR	SDPPEAHVTLHPRPEGDVTLR	3	SDPPEAHVTLHPRPEGDVTLR3	25785.8	12578.7	22201.3
P15978	P16391;P15978	HA11_RAT	RT1-Aw2	Class I histocompatibility antigen, Non-RT1.A alpha-1 chain	0	SDPPEAHVTLHPRPEGDVTLR	SDPPEAHVTLHPRPEGDVTLR	4	SDPPEAHVTLHPRPEGDVTLR4	251609	228344	260079
Q6MG88	Q6MG88	GPSM3_RAT	Gpsm3	G-protein-signaling modulator 3	1	SDPPLPPGGQELLELLLR	SDPPLPPGGQELLELLLR	2	SDPPLPPGGQELLELLLR2	32099.6		
E9PTG8	E9PTG8	STK10_RAT	Stk10	Serine/threonine-protein kinase 10	1	SDPPTLLTPSK	SDPPTLLTPSK	2	SDPPTLLTPSK2	87614.7	99143.4	44338
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	SDPSLWNPAAPEPGQPPLLPPR	SDPSLWNPAAPEPGQPPLLPPR	3	SDPSLWNPAAPEPGQPPLLPPR3	5134.76		5316.61
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	SDPSLWNPAAPEPGQPPLLPPRK	SDPSLWNPAAPEPGQPPLLPPRK	3	SDPSLWNPAAPEPGQPPLLPPRK3	9166.23	3267.94	12998.5
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	SDPVQYNQSSLSEIEDSLPPGK	SDPVQYNQSSLSEIEDSLPPGK	3	SDPVQYNQSSLSEIEDSLPPGK3	19068	22598.8	25750.1
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	SDPVVSYR	SDPVVSYR	2	SDPVVSYR2	113734	126884	145020
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	SDPYALVR	SDPYALVR	2	SDPYALVR2	1.1209e+06	1.11469e+06	1.12751e+06
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	SDPYGIIR	SDPYGIIR	2	SDPYGIIR2	124364	105843	108850
D3ZLA3	D3ZLA3	D3ZLA3_RAT	Cpne3	Copine 3	1	SDPYLEFHK	SDPYLEFHK	2	SDPYLEFHK2	36806.2	44450.9	32913.5
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	SDQATSESNPVTQK	SDQATSESNPVTQK	2	SDQATSESNPVTQK2	21874.1	17169	26291.6
Q6AYD3	Q6AYD3	PA2G4_RAT	Pa2g4	Proliferation-associated protein 2G4	1	SDQDYILK	SDQDYILK	2	SDQDYILK2	4200.32		2113.11
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	SDQELSEEESK	SDQELSEEESK	2	SDQELSEEESK2	4001.34	1123.04	2694.34
O08775	O08775	VGFR2_RAT	Kdr	Vascular endothelial growth factor receptor 2	1	SDQGEYTCTAYSGLMTK	SDQGEYTC(UniMod:4)TAYSGLMTK	2	SDQGEYTC(UniMod:4)TAYSGLMTK2	9392.09	6370.22	5991.05
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	SDQGGETEIETEETEMLTPDMDTER	SDQGGETEIETEETEMLTPDMDTER	3	SDQGGETEIETEETEMLTPDMDTER3	17080.9	28643.3	29929.8
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	SDQLHSSNENFANK	SDQLHSSNENFANK	3	SDQLHSSNENFANK3	5422.16	9515.73	2493.04
Q9Z2J5	Q9Z2J5	VAMP5_RAT	Vamp5	Vesicle-associated membrane protein 5	1	SDQLLDMSSAFSK	SDQLLDMSSAFSK	2	SDQLLDMSSAFSK2	43270.1	41173.1	47642.4
P30427	P30427	PLEC_RAT	Plec	Plectin	1	SDQLTGLSLLPLSEK	SDQLTGLSLLPLSEK	2	SDQLTGLSLLPLSEK2	6030.51	2390.84	3022.81
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	SDQNLQTALELTR	SDQNLQTALELTR	2	SDQNLQTALELTR2	42175.7	42235.7	40628.2
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	SDQNLQTALELTR	SDQNLQTALELTR	3	SDQNLQTALELTR3	7776.88	4552.8	4761.21
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	SDQNLQTALELTRR	SDQNLQTALELTRR	3	SDQNLQTALELTRR3	4367.06	6242.99	11511.5
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	SDQVNGVLVLSLLDK	SDQVNGVLVLSLLDK	2	SDQVNGVLVLSLLDK2	58761.5	71424	67115.6
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	SDQVNGVLVLSLLDK	SDQVNGVLVLSLLDK	3	SDQVNGVLVLSLLDK3	4675.18	1924.64	2658.76
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	SDQWKPLNLEEK	SDQWKPLNLEEK	2	SDQWKPLNLEEK2	28562.2	33862.4	27340.6
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	SDQWKPLNLEEK	SDQWKPLNLEEK	3	SDQWKPLNLEEK3	32327.9	40406.3	40568.2
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	SDQWKPLNLEEKK	SDQWKPLNLEEKK	3	SDQWKPLNLEEKK3	3413.78	5295.79	2594.64
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	SDQWKPLNLEEKK	SDQWKPLNLEEKK	4	SDQWKPLNLEEKK4	5769.65	7604.68	2325.26
P13803	P13803	ETFA_RAT	Etfa	Electron transfer flavoprotein subunit alpha, mitochondrial	1	SDRPELTGAK	SDRPELTGAK	2	SDRPELTGAK2	10488.7	14133.6	16009.7
P51111	P51111	HD_RAT	Htt	Huntingtin	1	SDSALLEGAELVNR	SDSALLEGAELVNR	2	SDSALLEGAELVNR2	24908	31719.6	23338.7
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	SDSAPPTPVNR	SDSAPPTPVNR	2	SDSAPPTPVNR2	29815.2	12312.3	20336
D3ZYF5	D3ZYF5	D3ZYF5_RAT	Trim58	Tripartite motif-containing 58	1	SDSAQGVYACPQCR	SDSAQGVYAC(UniMod:4)PQC(UniMod:4)R	2	SDSAQGVYAC(UniMod:4)PQC(UniMod:4)R2	13200.3	11819.9	9871.71
A0A8I5ZWZ4	A0A8I5ZWZ4	A0A8I5ZWZ4_RAT	Nmt2	Glycylpeptide N-tetradecanoyltransferase	1	SDSASDSQEIK	SDSASDSQEIK	2	SDSASDSQEIK2	4205.26		2306.24
D4A3L3	D4A3L3	D4A3L3_RAT	Megf9	Multiple EGF-like-domains 9	1	SDSCDVLTGACLNCQENTK	SDSC(UniMod:4)DVLTGAC(UniMod:4)LNC(UniMod:4)QENTK	3	SDSC(UniMod:4)DVLTGAC(UniMod:4)LNC(UniMod:4)QENTK3	13302.5	8519.04	19833.7
P14270	P14270;P14646	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	0	SDSDYDLSPK	SDSDYDLSPK	2	SDSDYDLSPK2	26451.7	21366.2	17564.3
D3ZYB4	D3ZYB4	D3ZYB4_RAT	Lpin2	phosphatidate phosphatase	1	SDSELEVKPSESLLR	SDSELEVKPSESLLR	3	SDSELEVKPSESLLR3	10944.8		8569.97
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	SDSENGEEEEAAEAGAFNAPVINR	SDSENGEEEEAAEAGAFNAPVINR	3	SDSENGEEEEAAEAGAFNAPVINR3	14545.4	21024.4	18463.8
A0A8I6A6I4	A0A8I6A6I4	A0A8I6A6I4_RAT	Atp11b	Phospholipid-transporting ATPase	1	SDSGCAEQLR	SDSGC(UniMod:4)AEQLR	2	SDSGC(UniMod:4)AEQLR2	12348.7	10460.8	8289.47
D3ZYR1	D3ZYR1	FCHO2_RAT	Fcho2	F-BAR domain only protein 2	1	SDSGGSGSLR	SDSGGSGSLR	2	SDSGGSGSLR2	32788.2		40270.6
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	SDSGGSSSEPFER	SDSGGSSSEPFER	2	SDSGGSSSEPFER2	3968.1	9868.99	9546.18
D3ZYT6	D3ZYT6	D3ZYT6_RAT	Treml1	Triggering receptor expressed on myeloid cells-like 1	1	SDSGLPSDIPHMR	SDSGLPSDIPHMR	2	SDSGLPSDIPHMR2	615447	546228	596568
D3ZYT6	D3ZYT6	D3ZYT6_RAT	Treml1	Triggering receptor expressed on myeloid cells-like 1	1	SDSGLPSDIPHMR	SDSGLPSDIPHMR	3	SDSGLPSDIPHMR3	6.4637e+06	6.77555e+06	7.02771e+06
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	SDSIIFQFTK	SDSIIFQFTK	2	SDSIIFQFTK2	60726.8	49316.5	36863.3
D3ZX21	D3ZX21	D3ZX21_RAT	Ap4e1	AP-4 complex subunit epsilon	1	SDSISSETK	SDSISSETK	2	SDSISSETK2	1564.72	5962.09	7461.74
Q5EGY4	Q5EGY4	YKT6_RAT	Ykt6	Synaptobrevin homolog YKT6	1	SDSLAGVVIADSEYPSR	SDSLAGVVIADSEYPSR	2	SDSLAGVVIADSEYPSR2	6962.43	17119.3	10635.2
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	SDSLDTDSSMDTTLILK	SDSLDTDSSMDTTLILK	2	SDSLDTDSSMDTTLILK2	3621.15	3445	3622.81
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	SDSMPLYSNWR	SDSMPLYSNWR	2	SDSMPLYSNWR2	70903.8	83396	82032.4
G3V912	G3V912	G3V912_RAT	Tmx4	Thioredoxin-related transmembrane protein 4	1	SDSNEQGVVK	SDSNEQGVVK	2	SDSNEQGVVK2	20915.9	17894.5	17813.1
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	SDSNFQVPNGGIPR	SDSNFQVPNGGIPR	2	SDSNFQVPNGGIPR2	57560.1	64695.9	47188.7
Q5Y4N8	Q5Y4N8	AGRE1_RAT	Adgre1	Adhesion G protein-coupled receptor E2	1	SDSPCGSNSVCTNIPGR	SDSPC(UniMod:4)GSNSVC(UniMod:4)TNIPGR	2	SDSPC(UniMod:4)GSNSVC(UniMod:4)TNIPGR2	28998.2	17376.8	33598.4
Q5Y4N8	Q5Y4N8	AGRE1_RAT	Adgre1	Adhesion G protein-coupled receptor E2	1	SDSPCGSNSVCTNIPGR	SDSPC(UniMod:4)GSNSVC(UniMod:4)TNIPGR	3	SDSPC(UniMod:4)GSNSVC(UniMod:4)TNIPGR3	7698.61	9403.81	16809.7
Q66H74	Q66H74	GLP3L_RAT	Golph3l	Golgi phosphoprotein 3-like	1	SDSPTGDVLLDETLK	SDSPTGDVLLDETLK	2	SDSPTGDVLLDETLK2	5556.22	2743.12	6603.9
F1LNS2	F1LNS2	F1LNS2_RAT	Dennd10	DENN domain containing 10	1	SDSQVIQDIALK	SDSQVIQDIALK	2	SDSQVIQDIALK2	11706.3	15454.7	9615.4
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SDSSGQYENFAASNK	SDSSGQYENFAASNK	2	SDSSGQYENFAASNK2	1.11042e+06	1.45415e+06	1.39023e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SDSSGQYENFAASNK	SDSSGQYENFAASNK	3	SDSSGQYENFAASNK3	18102.8	27465.5	24504
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	SDSSLETMENPGVMGNK	SDSSLETMENPGVMGNK	2	SDSSLETMENPGVMGNK2	21899.1	24004.6	26936.9
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	SDSTWIVLGLR	SDSTWIVLGLR	2	SDSTWIVLGLR2	32430.6	40787.7	25571.9
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	SDSVSNLELSEDSVVTK	SDSVSNLELSEDSVVTK	2	SDSVSNLELSEDSVVTK2	143456	178013	150207
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	SDSVSNLELSEDSVVTK	SDSVSNLELSEDSVVTK	3	SDSVSNLELSEDSVVTK3	11402.3	12348.5	19817.3
Q6J1Y9	Q6J1Y9	UBP19_RAT	Usp19	Ubiquitin carboxyl-terminal hydrolase 19	1	SDSVSPVMIR	SDSVSPVMIR	2	SDSVSPVMIR2	3804.55	8028.74	
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	SDSYMGLDQTKPLK	SDSYMGLDQTKPLK	3	SDSYMGLDQTKPLK3	11512.8	11184.8	11893.4
B1WBV4	B1WBV4	B1WBV4_RAT	Plekhf2	Pleckstrin homology and FYVE domain containing 2	1	SDSYSQSLK	SDSYSQSLK	2	SDSYSQSLK2	97848.9	118822	105117
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	SDSYTLDPDTLR	SDSYTLDPDTLR	2	SDSYTLDPDTLR2	29346.1	25547.2	21399.8
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	SDTAAAAVR	SDTAAAAVR	2	SDTAAAAVR2	233995	257142	273267
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	SDTDMGVCSGTDEDPDDK	SDTDMGVC(UniMod:4)SGTDEDPDDK	2	SDTDMGVC(UniMod:4)SGTDEDPDDK2	4030.24	6587.89	7024.43
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	SDTFINLR	SDTFINLR	1	SDTFINLR1		27634.1	34646.8
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	SDTFINLR	SDTFINLR	2	SDTFINLR2	3.14769e+06	3.73734e+06	3.43943e+06
P0C8E4	P0C8E4	M3K7_RAT	Map3k7	Mitogen-activated protein kinase kinase kinase 7	1	SDTNMEQVPATNDTIK	SDTNMEQVPATNDTIK	2	SDTNMEQVPATNDTIK2	10206.7	8072.26	7977.09
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	SDTNRLDCVK	SDTNRLDC(UniMod:4)VK	2	SDTNRLDC(UniMod:4)VK2	67767.7	71336.9	33771.4
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	SDTNRLDCVK	SDTNRLDC(UniMod:4)VK	3	SDTNRLDC(UniMod:4)VK3	1.62054e+06	1.33245e+06	1.15889e+06
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	SDTPAMLNPANVPTHLMVLCCVLR	SDTPAMLNPANVPTHLMVLC(UniMod:4)C(UniMod:4)VLR	3	SDTPAMLNPANVPTHLMVLC(UniMod:4)C(UniMod:4)VLR3	23594.2		16860.1
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	SDTPLIYK	SDTPLIYK	2	SDTPLIYK2	64881.2	49905.7	52183.7
Q6IRJ7	Q6IRJ7	Q6IRJ7_RAT	Anxa7	Annexin	1	SDTSGHFER	SDTSGHFER	2	SDTSGHFER2	9645.13		6140.83
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	SDTSGHFQR	SDTSGHFQR	2	SDTSGHFQR2			19011.3
B1WC91	B1WC91	B1WC91_RAT	C1qtnf3	C1q and TNF related 3	1	SDTSSNHAVLK	SDTSSNHAVLK	2	SDTSSNHAVLK2	299426	303021	275851
B1WC91	B1WC91	B1WC91_RAT	C1qtnf3	C1q and TNF related 3	1	SDTSSNHAVLK	SDTSSNHAVLK	3	SDTSSNHAVLK3	1.63636e+06	1.15698e+06	1.04533e+06
P35565	P35565	CALX_RAT	Canx	Calnexin	1	SDTSTPPSPK	SDTSTPPSPK	2	SDTSTPPSPK2	806421	767333	766149
O55171	O55171;A0A8I6A6H9;O88267	ACOT2_RAT	Acot2	Acyl-coenzyme A thioesterase 2, mitochondrial	0	SDTTFLFLVGQDDHNWK	SDTTFLFLVGQDDHNWK	3	SDTTFLFLVGQDDHNWK3	33489.1	20816.5	32278.7
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	SDTVQLLTVK	SDTVQLLTVK	2	SDTVQLLTVK2	14012.8	17598.4	16670.7
Q3MIB4	Q3MIB4	LONP2_RAT	Lonp2	Lon protease homolog 2, peroxisomal	1	SDVADGEGCK	SDVADGEGC(UniMod:4)K	2	SDVADGEGC(UniMod:4)K2			5135.86
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	SDVAIWL	SDVAIWL	1	SDVAIWL1	97976.8	99110	82963.9
P01026	P01026	CO3_RAT	C3	Complement C3	1	SDVDEDIIPEEDIISR	SDVDEDIIPEEDIISR	2	SDVDEDIIPEEDIISR2	4.28268e+06	4.22014e+06	3.8777e+06
P01026	P01026	CO3_RAT	C3	Complement C3	1	SDVDEDIIPEEDIISR	SDVDEDIIPEEDIISR	3	SDVDEDIIPEEDIISR3	291327	295111	286792
D4A748	D4A748	D4A748_RAT	Wdfy4	WDFY family member 4	1	SDVDQDGYLLLK	SDVDQDGYLLLK	2	SDVDQDGYLLLK2		2375.16	3485.59
Q6AYA6	Q6AYA6	CYBC1_RAT	Cybc1	Cytochrome b-245 chaperone 1	1	SDVEAIAK	SDVEAIAK	2	SDVEAIAK2	58778.4	54203.7	46636.4
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	SDVEINYSLIEIK	SDVEINYSLIEIK	2	SDVEINYSLIEIK2	18816.5	16470.2	17315.2
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	SDVEIPATVTAFSFEDDSVPLSPLK	SDVEIPATVTAFSFEDDSVPLSPLK	3	SDVEIPATVTAFSFEDDSVPLSPLK3	56568.7	61374.4	75434.9
D3ZZL3	D3ZZL3	D3ZZL3_RAT	Naglu	N-acetyl-alpha-glucosaminidase	1	SDVFEAWR	SDVFEAWR	2	SDVFEAWR2	23476.2	30127.3	15462.1
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	SDVFTNPEK	SDVFTNPEK	2	SDVFTNPEK2	34463.6	33903.5	29573.5
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	SDVGITWNSLQGK	SDVGITWNSLQGK	2	SDVGITWNSLQGK2	151848	155978	151638
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	SDVITVLEQQDMWWFGEVQGQK	SDVITVLEQQDMWWFGEVQGQK	3	SDVITVLEQQDMWWFGEVQGQK3	1976.47		1818.06
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	SDVLLGTAGLDIYETLK	SDVLLGTAGLDIYETLK	2	SDVLLGTAGLDIYETLK2	7818.04	6145.36	1160.4
Q62656	Q62656	PTPRZ_RAT	Ptprz1	Receptor-type tyrosine-protein phosphatase zeta	1	SDVLNTSLNPTSQQVAEFNPER	SDVLNTSLNPTSQQVAEFNPER	3	SDVLNTSLNPTSQQVAEFNPER3	2410.51	2472.5	6159.1
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	SDVLQPGAEVTTDDR	SDVLQPGAEVTTDDR	2	SDVLQPGAEVTTDDR2	43064.1	26978.5	34210.1
Q32KJ5	Q32KJ5	Q32KJ5_RAT	Gns	N-acetylglucosamine-6-sulfatase	1	SDVLVEYQGEGR	SDVLVEYQGEGR	2	SDVLVEYQGEGR2	5638.95	2590.82	9768.35
Q4V8C7	Q4V8C7	PRKRA_RAT	Prkra	Interferon-inducible double-stranded RNA-dependent protein kinase activator A	1	SDVQVHVPTFTFR	SDVQVHVPTFTFR	3	SDVQVHVPTFTFR3	10984.1	15916.1	11060.4
P51111	P51111	HD_RAT	Htt	Huntingtin	1	SDVSSSAFAASVK	SDVSSSAFAASVK	2	SDVSSSAFAASVK2	9910.46	21745.2	14999.5
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	SDVSTLGHLVVTTQGGYVK	SDVSTLGHLVVTTQGGYVK	3	SDVSTLGHLVVTTQGGYVK3	2264.83	10854.3	5175.68
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	SDVTETVVTGTQLSQLIEGLDR	SDVTETVVTGTQLSQLIEGLDR	3	SDVTETVVTGTQLSQLIEGLDR3	28398.9	27585.6	25494.6
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	SDVYDVGAGQHLELEYASLEPSR	SDVYDVGAGQHLELEYASLEPSR	3	SDVYDVGAGQHLELEYASLEPSR3	9698.8	10370.8	7061.85
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	SDWEVKEEMDFPQLMK	SDWEVKEEMDFPQLMK	3	SDWEVKEEMDFPQLMK3	12275.6	17565.5	19222.2
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	SDWHELPSQECSEHR	SDWHELPSQEC(UniMod:4)SEHR	2	SDWHELPSQEC(UniMod:4)SEHR2	11103.2	6051.64	7070.93
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	SDWHELPSQECSEHR	SDWHELPSQEC(UniMod:4)SEHR	3	SDWHELPSQEC(UniMod:4)SEHR3	39891	36295.1	38317.2
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	SDWHELPSQECSEHR	SDWHELPSQEC(UniMod:4)SEHR	4	SDWHELPSQEC(UniMod:4)SEHR4	62358.9	71755.7	61809.5
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	SDWHELPSQECSEHRESEGLITSGNDK	SDWHELPSQEC(UniMod:4)SEHRESEGLITSGNDK	4	SDWHELPSQEC(UniMod:4)SEHRESEGLITSGNDK4	3593.73	1560.28	2960.85
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	SDWIHDTPVSLGK	SDWIHDTPVSLGK	2	SDWIHDTPVSLGK2	8784.25	12978.8	7380.56
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	SDWIHDTPVSLGK	SDWIHDTPVSLGK	3	SDWIHDTPVSLGK3	80834.3	75948.1	86919.4
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	SDWQLIVELK	SDWQLIVELK	2	SDWQLIVELK2	10989	9504.84	7681.68
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	SDWQLIVELKK	SDWQLIVELKK	3	SDWQLIVELKK3	9432.46	6340.01	6219.45
Q5FVL2	Q5FVL2	EMC8_RAT	Emc8	ER membrane protein complex subunit 8	1	SDWTNPEINK	SDWTNPEINK	2	SDWTNPEINK2	28615.7	34254.5	32508.2
A0A8I6A7A4	A0A8I6A7A4	A0A8I6A7A4_RAT	Ddx3y	RNA helicase	1	SDYDCIASR	SDYDC(UniMod:4)IASR	2	SDYDC(UniMod:4)IASR2	3993.58	5330.62	3937.69
P41562	P41562	IDHC_RAT	Idh1	Isocitrate dehydrogenase [NADP] cytoplasmic	1	SDYLNTFEFMDK	SDYLNTFEFMDK	2	SDYLNTFEFMDK2	12085.2	13137.1	12033.1
Q68FV8	Q68FV8;A0A8I5ZW20	UBTD1_RAT	Ubtd1	Ubiquitin domain-containing protein 1	0	SDYPMTDGQLR	SDYPMTDGQLR	2	SDYPMTDGQLR2	34525.7	24625.6	51855.2
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	SDYSLNK	SDYSLNK	2	SDYSLNK2	25960.2	35267.9	30891.8
F1M3X3	F1M3X3	F1M3X3_RAT	ENSRNOG00000068908	Ig-like domain-containing protein	1	SDYTATYYCVR	SDYTATYYC(UniMod:4)VR	2	SDYTATYYC(UniMod:4)VR2	39371.5	27462.8	36127.1
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	SEAACVAAGPGIR	SEAAC(UniMod:4)VAAGPGIR	2	SEAAC(UniMod:4)VAAGPGIR2	65788.3	72023.9	65809.8
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	SEAACVAAGPGIR	SEAAC(UniMod:4)VAAGPGIR	3	SEAAC(UniMod:4)VAAGPGIR3	3546.6	1993.99	1802.52
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	SEAAVPPWVESHDEETIQQQILALSADK	SEAAVPPWVESHDEETIQQQILALSADK	4	SEAAVPPWVESHDEETIQQQILALSADK4		17212	10060.1
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	SEAAVPPWVESHDEETIQQQILALSADKR	SEAAVPPWVESHDEETIQQQILALSADKR	4	SEAAVPPWVESHDEETIQQQILALSADKR4	28266.1	32284.7	33807.9
A0A8I5ZQ72	A0A8I5ZQ72	A0A8I5ZQ72_RAT	Zc3h12c	Zinc finger CCCH type containing 12C	1	SEADQTVSTVNSAMR	SEADQTVSTVNSAMR	2	SEADQTVSTVNSAMR2	1480.7	4392.32	
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	SEAEDDEDEIDDLPSSR	SEAEDDEDEIDDLPSSR	2	SEAEDDEDEIDDLPSSR2	35176	31709.9	24714
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	SEAEDDEDEIDDLPSSR	SEAEDDEDEIDDLPSSR	3	SEAEDDEDEIDDLPSSR3	2082.71	3569.64	3316.12
D4ACN8	D4ACN8	PLRKT_RAT	Plgrkt	Plasminogen receptor (KT)	1	SEAEDILETEK	SEAEDILETEK	2	SEAEDILETEK2	54498.9	50851.8	51192.2
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	SEAEHLFVTATQFAK	SEAEHLFVTATQFAK	2	SEAEHLFVTATQFAK2	24565.2	24762.6	25732.6
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	SEAEHLFVTATQFAK	SEAEHLFVTATQFAK	3	SEAEHLFVTATQFAK3	45928.8	51756.9	54136.7
P23606	P23606	TGM1_RAT	Tgm1	Protein-glutamine gamma-glutamyltransferase K	1	SEAGEFQLPFDPR	SEAGEFQLPFDPR	2	SEAGEFQLPFDPR2	1091.1		
A0A8I6AKR4	A0A8I6AKR4	A0A8I6AKR4_RAT	Ap3s1	Adaptor related protein complex 3 subunit sigma 1	1	SEAGLAGAPAR	SEAGLAGAPAR	2	SEAGLAGAPAR2	202361	215279	221817
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	SEAGVISK	SEAGVISK	2	SEAGVISK2	175547	207073	200057
A0JN30	A0JN30	A0JN30_RAT	Cnpy2	Canopy FGF signaling regulator 2	1	SEAHLTELLEEICDR	SEAHLTELLEEIC(UniMod:4)DR	3	SEAHLTELLEEIC(UniMod:4)DR3	7249.21	3830.2	
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	SEAITTPGVR	SEAITTPGVR	2	SEAITTPGVR2	39445.1	47260.2	57003.6
D3ZXF9	D3ZXF9	D3ZXF9_RAT	Mrpl12	Mitochondrial ribosomal protein L12	1	SEALAGAPLDNAPK	SEALAGAPLDNAPK	2	SEALAGAPLDNAPK2	95590.8	89460.8	91550.3
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	SEALENIK	SEALENIK	2	SEALENIK2	29007.3	34804.1	41395.1
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	SEALGVGDVK	SEALGVGDVK	2	SEALGVGDVK2	250836	221937	241314
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	SEALKDR	SEALKDR	2	SEALKDR2			24736.7
D4A3X7	D4A3X7	D4A3X7_RAT	Snx33	Sorting nexin	1	SEALNNAISHTGR	SEALNNAISHTGR	3	SEALNNAISHTGR3	30740.5	13776	18245
P49651	P49651	P2RY1_RAT	P2ry1	P2Y purinoceptor 1	1	SEANLQSK	SEANLQSK	2	SEANLQSK2			28045.4
Q641X8	Q641X8;A0A0G2K273	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	0	SEAPNWATQDSGFY	SEAPNWATQDSGFY	2	SEAPNWATQDSGFY2	13038.4	8840.52	14618.7
D4ACK1	D4ACK1	D4ACK1_RAT	Nup214	Nucleoporin 214	1	SEAQLQEIR	SEAQLQEIR	2	SEAQLQEIR2	7709.72	5653.37	5106.94
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	SEAQQPIYTK	SEAQQPIYTK	2	SEAQQPIYTK2	5967.47	4585.86	4893.1
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	SEAQQPIYTKPLSPDAR	SEAQQPIYTKPLSPDAR	2	SEAQQPIYTKPLSPDAR2	4832.28	2519.94	
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	SEAQQPIYTKPLSPDAR	SEAQQPIYTKPLSPDAR	3	SEAQQPIYTKPLSPDAR3	100169	103178	128108
Q1HCL7	Q1HCL7	NAKD2_RAT	Nadk2	NAD kinase 2, mitochondrial	1	SEASGPQLLPVR	SEASGPQLLPVR	2	SEASGPQLLPVR2	2161.91	1183.68	
P26453	P26453	BASI_RAT	Bsg	Basigin	1	SEASHPPVDEWVWFK	SEASHPPVDEWVWFK	2	SEASHPPVDEWVWFK2	46870.3	42112.5	32630
P26453	P26453	BASI_RAT	Bsg	Basigin	1	SEASHPPVDEWVWFK	SEASHPPVDEWVWFK	3	SEASHPPVDEWVWFK3	220127	201718	230684
D3Z8L7	D3Z8L7	RRAS_RAT	Rras	Ras-related protein R-Ras	1	SEASSFSASHHMTYFEASAK	SEASSFSASHHMTYFEASAK	3	SEASSFSASHHMTYFEASAK3	101900	109892	94553.4
D3Z8L7	D3Z8L7	RRAS_RAT	Rras	Ras-related protein R-Ras	1	SEASSFSASHHMTYFEASAK	SEASSFSASHHMTYFEASAK	4	SEASSFSASHHMTYFEASAK4	23160.4	43628.3	56281.4
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	SEATFQFTVER	SEATFQFTVER	2	SEATFQFTVER2	2246.36	4355.5	9430
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	SEAVQMTPEESR	SEAVQMTPEESR	2	SEAVQMTPEESR2	38630.9	49301.1	35609.6
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	SEAVVEYVFSGSR	SEAVVEYVFSGSR	2	SEAVVEYVFSGSR2	125691	104873	114793
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	SECCATLGTAWGSPCER	SEC(UniMod:4)C(UniMod:4)ATLGTAWGSPC(UniMod:4)ER	2	SEC(UniMod:4)C(UniMod:4)ATLGTAWGSPC(UniMod:4)ER2	1839.83	1108.96	2103.44
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	SECCSSLGAAWGSPCTICQVDPICGK	SEC(UniMod:4)C(UniMod:4)SSLGAAWGSPC(UniMod:4)TIC(UniMod:4)QVDPIC(UniMod:4)GK	3	SEC(UniMod:4)C(UniMod:4)SSLGAAWGSPC(UniMod:4)TIC(UniMod:4)QVDPIC(UniMod:4)GK3	17428.6	25317	16152.1
Q68FQ9	Q68FQ9	Q68FQ9_RAT	Lancl2	LanC lantibiotic synthetase component C-like 2 (Bacterial)	1	SECESQECITK	SEC(UniMod:4)ESQEC(UniMod:4)ITK	2	SEC(UniMod:4)ESQEC(UniMod:4)ITK2	11351.6	7736.99	5735.56
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	SECLNNIGDSSPLIR	SEC(UniMod:4)LNNIGDSSPLIR	2	SEC(UniMod:4)LNNIGDSSPLIR2	60155.7	76319.7	69407.6
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	SECLNNIGDSSPLIR	SEC(UniMod:4)LNNIGDSSPLIR	3	SEC(UniMod:4)LNNIGDSSPLIR3	13539.8	14195.7	12361.9
D4ACD2	D4ACD2	D4ACD2_RAT	Bach1	BTB domain and CNC homolog 1	1	SECPWLGIR	SEC(UniMod:4)PWLGIR	2	SEC(UniMod:4)PWLGIR2	13626.3	11759.4	10659.6
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	SECQWER	SEC(UniMod:4)QWER	2	SEC(UniMod:4)QWER2	25077.6	34358.8	14132.5
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	SECSSDFGGK	SEC(UniMod:4)SSDFGGK	2	SEC(UniMod:4)SSDFGGK2	65153.9	62878.2	59271
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	SECTEFVNQPYLLYSVHVK	SEC(UniMod:4)TEFVNQPYLLYSVHVK	3	SEC(UniMod:4)TEFVNQPYLLYSVHVK3	51516.7	61031.7	46328.8
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	SECVIANNLWVR	SEC(UniMod:4)VIANNLWVR	2	SEC(UniMod:4)VIANNLWVR2	8519.79		6166.29
A0A8I5ZP70	A0A8I5ZP70	A0A8I5ZP70_RAT	Tom1l2	Target of myb1 like 2 membrane trafficking protein	1	SEDALFAL	SEDALFAL	1	SEDALFAL1	21174.5	18150.2	22310.3
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	SEDCFILDHGR	SEDC(UniMod:4)FILDHGR	2	SEDC(UniMod:4)FILDHGR2	482468	381638	390888
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	SEDCFILDHGR	SEDC(UniMod:4)FILDHGR	3	SEDC(UniMod:4)FILDHGR3	2.16819e+06	2.3305e+06	2.61107e+06
B2GV55	B2GV55	B2GV55_RAT	Ube2q1	Ubiquitin conjugating enzyme E2 Q1	1	SEDDGIGK	SEDDGIGK	2	SEDDGIGK2	10867.1	18387.6	30651.3
B2GV55	B2GV55	B2GV55_RAT	Ube2q1	Ubiquitin conjugating enzyme E2 Q1	1	SEDDGIGKENLAILEK	SEDDGIGKENLAILEK	3	SEDDGIGKENLAILEK3	10714.3	14040.1	15910.6
A0A8I6GJC5	A0A8I6GJC5	A0A8I6GJC5_RAT	Reps1	RALBP1 associated Eps domain containing 1	1	SEDELRPDVDEHTQK	SEDELRPDVDEHTQK	3	SEDELRPDVDEHTQK3	19306.8	10880.6	20167.2
A0A8I6GJC5	A0A8I6GJC5	A0A8I6GJC5_RAT	Reps1	RALBP1 associated Eps domain containing 1	1	SEDELRPDVDEHTQK	SEDELRPDVDEHTQK	4	SEDELRPDVDEHTQK4	4781.71	9057.68	5348.85
F1LQP9	F1LQP9;D3ZER6	F1LQP9_RAT	Tnpo1	Transportin 1	0	SEDEPTR	SEDEPTR	2	SEDEPTR2			69533.2
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	SEDETEYGCR	SEDETEYGC(UniMod:4)R	2	SEDETEYGC(UniMod:4)R2	24595.7	21403.4	19167.3
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	SEDEVGSLIEYEFR	SEDEVGSLIEYEFR	2	SEDEVGSLIEYEFR2	85227.1	72545.1	81299.4
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	SEDEVGSLIEYEFR	SEDEVGSLIEYEFR	3	SEDEVGSLIEYEFR3	20522.5	36252	25580.1
Q769K2	Q769K2	NAPEP_RAT	Napepld	N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D	1	SEDFFILK	SEDFFILK	2	SEDFFILK2	35283	36231.4	41641.8
D3ZXJ5	D3ZXJ5	D3ZXJ5_RAT	Efl1	Elongation factor like GTPase 1	1	SEDFQSSVWSGPAGR	SEDFQSSVWSGPAGR	2	SEDFQSSVWSGPAGR2	6343.17	4955.66	3859.62
D4A0G7	D4A0G7	D4A0G7_RAT	Rab37	RAB37, member RAS oncogene family	1	SEDGETLAR	SEDGETLAR	2	SEDGETLAR2	152209	137972	55004.5
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	SEDILDYGPFK	SEDILDYGPFK	2	SEDILDYGPFK2	243391	226376	269648
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	SEDLFNEMNWQK	SEDLFNEMNWQK	2	SEDLFNEMNWQK2	101742	112009	124496
D4ABP9	D4ABP9	FBX3_RAT	Fbxo3	F-box only protein 3	1	SEDLLDVDTAAGGFQQR	SEDLLDVDTAAGGFQQR	2	SEDLLDVDTAAGGFQQR2	3624.31	1096.13	2753.31
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	SEDLPLR	SEDLPLR	2	SEDLPLR2	300110	303032	339747
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	SEDLPLRK	SEDLPLRK	2	SEDLPLRK2	41293.7	80736.5	25918.2
F1M842	F1M842	F1M842_RAT	Tp53bp1	Tumor protein p53 binding protein 1	1	SEDLPSSPQVSVAAVETK	SEDLPSSPQVSVAAVETK	2	SEDLPSSPQVSVAAVETK2	4668.98	5037.9	
Q9JHK1	Q9JHK1	Q9JHK1_RAT	Casp9	Caspase-9	1	SEDLQSLLLR	SEDLQSLLLR	2	SEDLQSLLLR2	3623.89	3502.97	2525.65
Q66H63	Q66H63	GDAP2_RAT	Gdap2	Ganglioside-induced differentiation-associated-protein 2	1	SEDLSDIASLK	SEDLSDIASLK	2	SEDLSDIASLK2	27626.1	24863	25988.7
B0BMY6	B0BMY6	B0BMY6_RAT	Otulin	ubiquitinyl hydrolase 1	1	SEDLVER	SEDLVER	2	SEDLVER2	12087.7	16482.2	12980.8
Q6P7B4	Q6P7B4	GAK1B_RAT	Gask1b	Golgi-associated kinase 1B	1	SEDNLNFK	SEDNLNFK	2	SEDNLNFK2	17890.8	13964.1	20287.8
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	SEDPDQQYLILNTAR	SEDPDQQYLILNTAR	2	SEDPDQQYLILNTAR2	54908.3	53442.9	39982.2
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	SEDPDQQYLILNTAR	SEDPDQQYLILNTAR	3	SEDPDQQYLILNTAR3	6595.69	10925.4	14189.3
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	SEDPNCPSER	SEDPNC(UniMod:4)PSER	2	SEDPNC(UniMod:4)PSER2			303245
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	SEDPSAGPDAGLPTGSQGDSK	SEDPSAGPDAGLPTGSQGDSK	3	SEDPSAGPDAGLPTGSQGDSK3	5296.21	6270.39	6167.75
A0A0G2JXD9	A0A0G2JXD9	A0A0G2JXD9_RAT	Dop1b	DOP1 leucine zipper like protein B	1	SEDSGIGLSASSPELSEHLR	SEDSGIGLSASSPELSEHLR	3	SEDSGIGLSASSPELSEHLR3	1161	3164.56	3294.83
Q6J1Y9	Q6J1Y9	UBP19_RAT	Usp19	Ubiquitin carboxyl-terminal hydrolase 19	1	SEDSGLDGVVAR	SEDSGLDGVVAR	2	SEDSGLDGVVAR2	2446.33	4242.18	3574.09
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	SEDSHVFSAVHSTR	SEDSHVFSAVHSTR	3	SEDSHVFSAVHSTR3	5500.45	3964.41	2410.36
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	SEDSHVFSAVHSTR	SEDSHVFSAVHSTR	4	SEDSHVFSAVHSTR4	5520.76	2951.05	6056.47
A0A8I6GL55	A0A8I6GL55	A0A8I6GL55_RAT	ENSRNOG00000065406	Ig-like domain-containing protein	1	SEDTAIYYCAR	SEDTAIYYC(UniMod:4)AR	2	SEDTAIYYC(UniMod:4)AR2	67751.7	61503.6	54317.6
A0A8I6GL55	A0A8I6GL55	A0A8I6GL55_RAT	ENSRNOG00000065406	Ig-like domain-containing protein	1	SEDTAIYYCAR	SEDTAIYYC(UniMod:4)AR	3	SEDTAIYYC(UniMod:4)AR3		14558.1	10014.4
A0A8I6ALZ6	A0A8I6ALZ6	A0A8I6ALZ6_RAT	ENSRNOG00000067516	Ig-like domain-containing protein	1	SEDTAMYFCAR	SEDTAMYFC(UniMod:4)AR	2	SEDTAMYFC(UniMod:4)AR2	36597.2	39593.6	44379.6
A0A8I6A6C3	A0A8I6A938;A0A8I6A6C3	A0A8I6A6C3_RAT	ENSRNOG00000067603	Ig-like domain-containing protein	0	SEDTAMYYCAK	SEDTAMYYC(UniMod:4)AK	2	SEDTAMYYC(UniMod:4)AK2	143384	138979	154193
A0A8I6AM09	A0A8I6AM09	A0A8I6AM09_RAT	ENSRNOG00000063791	Ig-like domain-containing protein	1	SEDTASYYCAR	SEDTASYYC(UniMod:4)AR	2	SEDTASYYC(UniMod:4)AR2	1783.22	2077.51	
A0A8I5Y662	A0A8I5Y662	A0A8I5Y662_RAT	ENSRNOG00000063707	Ig-like domain-containing protein	1	SEDTATYYCAK	SEDTATYYC(UniMod:4)AK	2	SEDTATYYC(UniMod:4)AK2	580977	550273	550225
A0A8I6AEV5	A0A8I6AEB7;A0A8I6AEV5;A0A8I6AP25;M0R7Q2	A0A8I6AEV5_RAT	ENSRNOG00000063148	Ig-like domain-containing protein	0	SEDTATYYCAR	SEDTATYYC(UniMod:4)AR	2	SEDTATYYC(UniMod:4)AR2	990302	947645	1.08773e+06
A0A8I6AEV5	A0A8I6AEB7;A0A8I6AEV5;A0A8I6AP25;M0R7Q2	A0A8I6AEV5_RAT	ENSRNOG00000063148	Ig-like domain-containing protein	0	SEDTATYYCAR	SEDTATYYC(UniMod:4)AR	3	SEDTATYYC(UniMod:4)AR3	11588.5	14390.3	13636.3
A0A8I6AP25	A0A8I6AP25	A0A8I6AP25_RAT	ENSRNOG00000065181	Ig-like domain-containing protein	1	SEDTATYYCARHT	SEDTATYYC(UniMod:4)ARHT	3	SEDTATYYC(UniMod:4)ARHT3	17765.6	8574.6	11812.3
A0A8I6A583	A0A8I6AH36;A0A8I6A583	A0A8I6A583_RAT	ENSRNOG00000064207	Ig-like domain-containing protein	0	SEDTATYYCTR	SEDTATYYC(UniMod:4)TR	2	SEDTATYYC(UniMod:4)TR2	565755	524330	654281
A0A8I6A8M8	A0A8I6A8M8	A0A8I6A8M8_RAT	ENSRNOG00000071152	Ig-like domain-containing protein	1	SEDTATYYCVK	SEDTATYYC(UniMod:4)VK	2	SEDTATYYC(UniMod:4)VK2	47579	42108.1	42389.9
A0A8I6G7J3	A0A8I6AGR0;A0A8I6G7J3	A0A8I6G7J3_RAT	ENSRNOG00000070816	Ig-like domain-containing protein	0	SEDTGIYYCTR	SEDTGIYYC(UniMod:4)TR	2	SEDTGIYYC(UniMod:4)TR2	30539.5	22897.8	27868.2
A0A8I6ARV9	A0A8I6ARV9	A0A8I6ARV9_RAT	Ctsa	Carboxypeptidase	1	SEDTLVVQDFGNIFTR	SEDTLVVQDFGNIFTR	2	SEDTLVVQDFGNIFTR2	22236.5	20712.9	22495.1
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	SEDTTGPITGLALTSVNK	SEDTTGPITGLALTSVNK	2	SEDTTGPITGLALTSVNK2	1966.39	2132.72	
D3ZHZ3	D3ZHZ3	D3ZHZ3_RAT	Osbpl3	Oxysterol-binding protein	1	SEDVFDEWVSK	SEDVFDEWVSK	2	SEDVFDEWVSK2	15351.9	12065.4	13711.9
F1LZ05	F1LZ05	F1LZ05_RAT	Parp14	Poly [ADP-ribose] polymerase	1	SEDVQGISQQIR	SEDVQGISQQIR	2	SEDVQGISQQIR2	1543.57	2911.82	2427.68
Q5BK39	Q5BK39	CP054_RAT		Transmembrane protein C16orf54 homolog	1	SEDWYGSSIPLLMDR	SEDWYGSSIPLLMDR	2	SEDWYGSSIPLLMDR2			7296.05
P10888	P10888	COX41_RAT	Cox4i1	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial	1	SEDYALPSYVDR	SEDYALPSYVDR	2	SEDYALPSYVDR2	637999	545244	654189
P10888	P10888	COX41_RAT	Cox4i1	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial	1	SEDYALPSYVDRR	SEDYALPSYVDRR	2	SEDYALPSYVDRR2	12327.1	13036.8	21361
P10888	P10888	COX41_RAT	Cox4i1	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial	1	SEDYALPSYVDRR	SEDYALPSYVDRR	3	SEDYALPSYVDRR3	333933	415715	505565
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	SEDYEQAAAHIHR	SEDYEQAAAHIHR	3	SEDYEQAAAHIHR3	14908.5	10913.4	20054.6
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	SEDYEQAAAHIHR	SEDYEQAAAHIHR	4	SEDYEQAAAHIHR4	10187.4	7069.1	11419.7
Q63321	Q63321	PLOD1_RAT	Plod1	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1	1	SEDYVDIVQGR	SEDYVDIVQGR	2	SEDYVDIVQGR2	17727.8	6954.87	14387.4
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	SEDYVELVQR	SEDYVELVQR	2	SEDYVELVQR2	44158.6	41608.7	30121
Q6AXS5	Q6AXS5	SERB1_RAT	Serbp1	SERPINE1 mRNA-binding protein 1	1	SEEAHAEDSVMDHHFR	SEEAHAEDSVMDHHFR	3	SEEAHAEDSVMDHHFR3	3125.09	6226.04	
Q6AXS5	Q6AXS5	SERB1_RAT	Serbp1	SERPINE1 mRNA-binding protein 1	1	SEEAHAEDSVMDHHFR	SEEAHAEDSVMDHHFR	4	SEEAHAEDSVMDHHFR4	36710.8	22322.3	9122.76
A0A8I6AGL0	A0A8I6AGL0	A0A8I6AGL0_RAT	Ankrd44	Ankyrin repeat domain 44	1	SEEAVQVLIK	SEEAVQVLIK	2	SEEAVQVLIK2	5269.29	1078.06	3480.44
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	SEECDHTQFLIEEK	SEEC(UniMod:4)DHTQFLIEEK	2	SEEC(UniMod:4)DHTQFLIEEK2	4365.36	7520.37	4714.14
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	SEECDHTQFLIEEK	SEEC(UniMod:4)DHTQFLIEEK	3	SEEC(UniMod:4)DHTQFLIEEK3	63899.7	81650.5	104032
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	SEECDHTQFLIEEKESK	SEEC(UniMod:4)DHTQFLIEEKESK	3	SEEC(UniMod:4)DHTQFLIEEKESK3	1034.26	1425.87	2524.36
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SEEDIPSDLLLLK	SEEDIPSDLLLLK	2	SEEDIPSDLLLLK2	3.77641e+06	4.85089e+06	4.57653e+06
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SEEDIPSDLLLLK	SEEDIPSDLLLLK	3	SEEDIPSDLLLLK3	96121.1	99299.2	109492
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SEEDIPSDLLLLKQK	SEEDIPSDLLLLKQK	3	SEEDIPSDLLLLKQK3	8965	10190.1	4379.38
Q9ES02	Q9ES02	MEPE_RAT	Mepe	Matrix extracellular phosphoglycoprotein	1	SEEDSSNSLSR	SEEDSSNSLSR	2	SEEDSSNSLSR2	7753.67	6349.82	3370.58
P09215	P09215	KPCD_RAT	Prkcd	Protein kinase C delta type	1	SEEEAMFPTMNR	SEEEAMFPTMNR	2	SEEEAMFPTMNR2	22221.6	12466.6	14725.1
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	SEEEFVHINNK	SEEEFVHINNK	2	SEEEFVHINNK2	5816.67		
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	SEEEFVHINNK	SEEEFVHINNK	3	SEEEFVHINNK3	22101.3	21295.9	24255.6
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	SEEEIDFLR	SEEEIDFLR	2	SEEEIDFLR2	187947	192192	172112
Q32Q55	Q32Q55	Q32Q55_RAT	Ces2h	Carboxylic ester hydrolase	1	SEEEIMSINK	SEEEIMSINK	2	SEEEIMSINK2	15538.3	16995.4	20081.2
Q304F3	Q304F3	Q304F3_RAT	Tnnc2	Troponin C2, fast skeletal type	1	SEEELAECFR	SEEELAEC(UniMod:4)FR	2	SEEELAEC(UniMod:4)FR2	9702.96	8279.35	15382.1
M0RCP2	M0RCP2	M0RCP2_RAT	Sh3pxd2b	SH3 and PX domains 2B	1	SEEELLER	SEEELLER	2	SEEELLER2	15236	11628.8	13450.2
Q9JIX3	Q9JIX3	FHIT_RAT	Fhit	Bis(5'-adenosyl)-triphosphatase	1	SEEEMAAEAEVLR	SEEEMAAEAEVLR	2	SEEEMAAEAEVLR2	3394.98	10327.2	
G3V9R8	G3V9R8	HNRPC_RAT	Hnrnpc	Heterogeneous nuclear ribonucleoprotein C	1	SEEEQSSASVK	SEEEQSSASVK	2	SEEEQSSASVK2			19090
Q76GL9	Q76GL9	Q76GL9_RAT	Slc1a4	Amino acid transporter	1	SEEETSPLVTHQNR	SEEETSPLVTHQNR	2	SEEETSPLVTHQNR2	3398.79	4455.42	2741.14
Q76GL9	Q76GL9	Q76GL9_RAT	Slc1a4	Amino acid transporter	1	SEEETSPLVTHQNR	SEEETSPLVTHQNR	3	SEEETSPLVTHQNR3	36727.3	29348.1	37941.3
A0A8I5ZTQ0	A0A8I5ZTQ0	A0A8I5ZTQ0_RAT	Mydgf	Myeloid-derived growth factor	1	SEEFEVTK	SEEFEVTK	2	SEEFEVTK2	29298	18444.2	29040.9
Q6RJR6	Q6RJR6	RTN3_RAT	Rtn3	Reticulon-3	1	SEEGHPFK	SEEGHPFK	1	SEEGHPFK1	10444.5	8172.82	
Q6RJR6	Q6RJR6	RTN3_RAT	Rtn3	Reticulon-3	1	SEEGHPFK	SEEGHPFK	2	SEEGHPFK2	130277	116602	111392
Q5U318	Q5U318	PEA15_RAT	Pea15	Astrocytic phosphoprotein PEA-15	1	SEEITTGSAWFSFLESHNK	SEEITTGSAWFSFLESHNK	3	SEEITTGSAWFSFLESHNK3	6758.39	13595.6	5716.13
Q62722	Q62722	NAB1_RAT	Nab1	NGFI-A-binding protein 1	1	SEELAGLSSQAEK	SEELAGLSSQAEK	2	SEELAGLSSQAEK2	2386.02		
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	SEELQVIK	SEELQVIK	2	SEELQVIK2	15063.3	9347.48	14345.1
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	SEELSLPEGK	SEELSLPEGK	2	SEELSLPEGK2	15236.9	20548.5	24828.9
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	SEEMNTK	SEEMNTK	2	SEEMNTK2			42712.9
P49651	P49651	P2RY1_RAT	P2ry1	P2Y purinoceptor 1	1	SEEMTLNILSEFK	SEEMTLNILSEFK	2	SEEMTLNILSEFK2	18823	19503.7	13089.5
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	SEEPSVSLPFLQTALLR	SEEPSVSLPFLQTALLR	2	SEEPSVSLPFLQTALLR2	12881.2	12098.3	18714.4
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	SEEPSVSLPFLQTALLR	SEEPSVSLPFLQTALLR	3	SEEPSVSLPFLQTALLR3	3166.64	3201.89	1821.41
Q5XIL2	Q5XIL2	P4K2B_RAT	Pi4k2b	Phosphatidylinositol 4-kinase type 2-beta	1	SEEPYGQLNPK	SEEPYGQLNPK	2	SEEPYGQLNPK2	9405.58	13897.4	11389.8
Q6P6R2	Q6P6R2;A0A8I6A931	DLDH_RAT	Dld	Dihydrolipoyl dehydrogenase, mitochondrial	0	SEEQLKEEGVEFK	SEEQLKEEGVEFK	3	SEEQLKEEGVEFK3	45731.9	47107.7	48062.9
A0A8I5YC74	A0A8I5YC74	A0A8I5YC74_RAT	ENSRNOG00000066004	Tropomyosin	1	SEERAEVAESR	SEERAEVAESR	2	SEERAEVAESR2	3637.05		6440.25
A0A8I5YC74	A0A8I5YC74	A0A8I5YC74_RAT	ENSRNOG00000066004	Tropomyosin	1	SEERAEVAESR	SEERAEVAESR	3	SEERAEVAESR3			11416.5
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	SEESEEPMETDQNAK	SEESEEPMETDQNAK	2	SEESEEPMETDQNAK2	295472	272117	294233
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	SEESEEPMETDQNAK	SEESEEPMETDQNAK	3	SEESEEPMETDQNAK3	21980.3	31836	31211.7
O88959	O88959	INHBE_RAT	Inhbe	Inhibin beta E chain	1	SEESGVTK	SEESGVTK	2	SEESGVTK2			19042.3
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	SEESQEIQK	SEESQEIQK	2	SEESQEIQK2	58487.8		34008
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	SEESQEIQKK	SEESQEIQKK	2	SEESQEIQKK2			4169.84
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	SEESQEIQKK	SEESQEIQKK	3	SEESQEIQKK3			3198
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	SEESVPGGGLAAGLVSANSNVR	SEESVPGGGLAAGLVSANSNVR	3	SEESVPGGGLAAGLVSANSNVR3	5376.75	5274.89	4282.07
P01026	P01026	CO3_RAT	C3	Complement C3	1	SEETKQNEGFSLTAK	SEETKQNEGFSLTAK	3	SEETKQNEGFSLTAK3	17478.7	14350.7	17230.3
G3V6L9	G3V6L9	G3V6L9_RAT	Fkbp3	peptidylprolyl isomerase	1	SEETLDEGPPK	SEETLDEGPPK	2	SEETLDEGPPK2	19549.8	7058.24	11845.4
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	SEEYLLCFSHMGLYVDPQGR	SEEYLLC(UniMod:4)FSHMGLYVDPQGR	3	SEEYLLC(UniMod:4)FSHMGLYVDPQGR3	10152.7	18460.7	10331
Q4V897	Q4V897	CC90B_RAT	Ccdc90b	Coiled-coil domain-containing protein 90B, mitochondrial	1	SEFANLR	SEFANLR	2	SEFANLR2	26405	46685.1	45863.4
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	SEFAVGTTWK	SEFAVGTTWK	2	SEFAVGTTWK2	53444.5	55330.2	69804.8
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	SEFDGDLQSQLVSK	SEFDGDLQSQLVSK	2	SEFDGDLQSQLVSK2	11141	5095.88	8363.51
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	SEFGSLDR	SEFGSLDR	2	SEFGSLDR2	25338.1	21984.6	24105.6
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	SEFIGLQLLDILTR	SEFIGLQLLDILTR	2	SEFIGLQLLDILTR2	67713.2		
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	SEFIGLQLLDILTR	SEFIGLQLLDILTR	3	SEFIGLQLLDILTR3	958.08	14167.9	8673.4
D3ZL10	D3ZL10	D3ZL10_RAT	Col6a6	Collagen type VI alpha 6 chain	1	SEFLLGTFTGEK	SEFLLGTFTGEK	2	SEFLLGTFTGEK2	4362.63	7746.36	8198.99
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	SEFLQESNLVMAK	SEFLQESNLVMAK	2	SEFLQESNLVMAK2	14192.5	21856.3	29464.3
D3ZEJ2	D3ZEJ2	D3ZEJ2_RAT	Mcur1	Mitochondrial calcium uniporter regulator 1	1	SEFSALR	SEFSALR	2	SEFSALR2	28506.6	18644.5	24745.3
A0A8I6G5Q1	A0A8I6G5Q1	A0A8I6G5Q1_RAT	Sema4d	Semaphorin 4D	1	SEFSDLEQSVK	SEFSDLEQSVK	2	SEFSDLEQSVK2	67781.4	48001.8	41215.3
Q9EPF2	Q9EPF2	MUC18_RAT	Mcam	Cell surface glycoprotein MUC18	1	SEFVVEVK	SEFVVEVK	2	SEFVVEVK2	1673.7	7586.74	
D3ZRI9	D3ZRI9	D3ZRI9_RAT	Gan	Gigaxonin	1	SEFYHDEFKR	SEFYHDEFKR	3	SEFYHDEFKR3	25134.9	12654.7	11374.9
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	SEGAQAHTWNVEVLIDVLK	SEGAQAHTWNVEVLIDVLK	3	SEGAQAHTWNVEVLIDVLK3	3027.4	2044.61	2950.95
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	SEGDNIVVGDK	SEGDNIVVGDK	2	SEGDNIVVGDK2	21122.3	16348.4	19550.9
Q498C8	Q498C8	RER1_RAT	Rer1	Protein RER1	1	SEGDSVGDSVHGK	SEGDSVGDSVHGK	2	SEGDSVGDSVHGK2			6014.6
Q498C8	Q498C8	RER1_RAT	Rer1	Protein RER1	1	SEGDSVGDSVHGKPSVVYR	SEGDSVGDSVHGKPSVVYR	3	SEGDSVGDSVHGKPSVVYR3	25627	27061.5	23156.9
Q498C8	Q498C8	RER1_RAT	Rer1	Protein RER1	1	SEGDSVGDSVHGKPSVVYR	SEGDSVGDSVHGKPSVVYR	4	SEGDSVGDSVHGKPSVVYR4	37737.4	40661.1	43974
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	SEGEALR	SEGEALR	2	SEGEALR2	42939.5		
Q5XIJ6	Q5XIJ6	BABA1_RAT	Babam1	BRISC and BRCA1-A complex member 1	1	SEGEGEAATADDGAASVPGAVPK	SEGEGEAATADDGAASVPGAVPK	3	SEGEGEAATADDGAASVPGAVPK3	5064.33	11645.5	5436.29
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	SEGEIAR	SEGEIAR	2	SEGEIAR2		63943.9	
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	SEGETIMSSNMGK	SEGETIMSSNMGK	2	SEGETIMSSNMGK2	162594	152895	165541
P41562	P41562	IDHC_RAT	Idh1	Isocitrate dehydrogenase [NADP] cytoplasmic	1	SEGGFIWACK	SEGGFIWAC(UniMod:4)K	2	SEGGFIWAC(UniMod:4)K2	14195.3	17470.2	17779.5
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	SEGIIPSPVSLVAEEK	SEGIIPSPVSLVAEEK	2	SEGIIPSPVSLVAEEK2	11069.5	17474.3	14826.7
Q9JJ79	Q9JJ79	DYHC2_RAT	Dync2h1	Cytoplasmic dynein 2 heavy chain 1	1	SEGLPSDDLSIENALVILQSR	SEGLPSDDLSIENALVILQSR	4	SEGLPSDDLSIENALVILQSR4	128487	168147	145927
Q5BJQ2	Q5BJQ2	MINY1_RAT	Mindy1	Ubiquitin carboxyl-terminal hydrolase MINDY-1	1	SEGLQLNFQQNVGDAMTVLPK	SEGLQLNFQQNVGDAMTVLPK	3	SEGLQLNFQQNVGDAMTVLPK3	9688.6	11604.8	10219.3
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	SEGLYLFENGQR	SEGLYLFENGQR	2	SEGLYLFENGQR2	1.12742e+06	1.0757e+06	1.09269e+06
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	SEGLYLFENGQR	SEGLYLFENGQR	3	SEGLYLFENGQR3	13457.7	14968.7	14316
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	SEGLYSTR	SEGLYSTR	2	SEGLYSTR2	223407	194174	238607
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	SEGSEYEEIPK	SEGSEYEEIPK	2	SEGSEYEEIPK2	7408.02	8910.13	6323.86
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	SEGSLAYVK	SEGSLAYVK	2	SEGSLAYVK2	24866.1	31475.8	35557.6
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	SEGSPVLPHEPSK	SEGSPVLPHEPSK	3	SEGSPVLPHEPSK3	31209.3	43980	36586.5
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	SEGTYCCGPVSVR	SEGTYC(UniMod:4)C(UniMod:4)GPVSVR	2	SEGTYC(UniMod:4)C(UniMod:4)GPVSVR2	11485.9	16530.9	9487.67
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	SEGVTTILEEAK	SEGVTTILEEAK	2	SEGVTTILEEAK2	267523	306241	277714
A0A0G2K5L2	A0A0G2K5L2	GHC1_RAT	Slc25a22	Mitochondrial glutamate carrier 1	1	SEGYFGMYR	SEGYFGMYR	2	SEGYFGMYR2	19864.5	15739.2	17345.1
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	SEGYLYTPQASSAEVEMSAYVVLAR	SEGYLYTPQASSAEVEMSAYVVLAR	3	SEGYLYTPQASSAEVEMSAYVVLAR3	17147.2	21760.5	7431.37
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	SEGYLYTPQASSAEVEMSAYVVLAR	SEGYLYTPQASSAEVEMSAYVVLAR	4	SEGYLYTPQASSAEVEMSAYVVLAR4	230638	196423	156605
P26453	P26453	BASI_RAT	Bsg	Basigin	1	SEHASEGEFVK	SEHASEGEFVK	2	SEHASEGEFVK2	52404.6	63380.7	56483.7
P26453	P26453	BASI_RAT	Bsg	Basigin	1	SEHASEGEFVK	SEHASEGEFVK	3	SEHASEGEFVK3	63019.5	68291.9	53999.5
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	SEHGTLTSSESHSEAVPK	SEHGTLTSSESHSEAVPK	3	SEHGTLTSSESHSEAVPK3	9954.8	6998.17	2859.88
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	SEHGTLTSSESHSEAVPK	SEHGTLTSSESHSEAVPK	4	SEHGTLTSSESHSEAVPK4	26067.7	23280.8	15768.1
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	SEHLHQTLTLHSYTSVLSR	SEHLHQTLTLHSYTSVLSR	4	SEHLHQTLTLHSYTSVLSR4		6714.19	
P52925	P52925;D3ZN59;D3ZS25	HMGB2_RAT	Hmgb2	High mobility group protein B2	0	SEHPGLSIGDTAK	SEHPGLSIGDTAK	3	SEHPGLSIGDTAK3	12176.9	4192.39	13168
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	SEHSLFQPK	SEHSLFQPK	2	SEHSLFQPK2	3971.57		6971.16
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	SEHTEPPAAADTK	SEHTEPPAAADTK	2	SEHTEPPAAADTK2	14639.7		24435.7
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	SEHTEPPAAADTK	SEHTEPPAAADTK	3	SEHTEPPAAADTK3	56606.6		19045
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	SEHTEPPAAADTKK	SEHTEPPAAADTKK	2	SEHTEPPAAADTKK2			3526.99
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	SEHTEPPAAADTKK	SEHTEPPAAADTKK	3	SEHTEPPAAADTKK3			38866.3
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	SEIANIQSGADSLPCLELPCDLSFK	SEIANIQSGADSLPC(UniMod:4)LELPC(UniMod:4)DLSFK	3	SEIANIQSGADSLPC(UniMod:4)LELPC(UniMod:4)DLSFK3		2025.57	
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	SEIASLSK	SEIASLSK	2	SEIASLSK2	20077.3	20371.2	22828.7
P14668	P14668	ANXA5_RAT	Anxa5	Annexin A5	1	SEIDLFNIR	SEIDLFNIR	2	SEIDLFNIR2	6477.82	2562.59	3440.34
P48037	P48037	ANXA6_RAT	Anxa6	Annexin A6	1	SEIDLLNIR	SEIDLLNIR	2	SEIDLLNIR2	4826.34	6557.8	4659.56
Q6IRJ7	Q6IRJ7	Q6IRJ7_RAT	Anxa7	Annexin	1	SEIDLVQIK	SEIDLVQIK	2	SEIDLVQIK2	130757	140696	155006
Q6P6Q2	Q6P6Q2	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	1	SEIDNVK	SEIDNVK	1	SEIDNVK1	6288.14	3110.26	2590.24
Q6P6Q2	Q6P6Q2	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	1	SEIDNVK	SEIDNVK	2	SEIDNVK2	558304	487475	466031
Q6P6Q2	Q6P6Q2	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	1	SEIDNVKK	SEIDNVKK	2	SEIDNVKK2	256556		153959
A0A8I6ABQ2	A0A8I5ZUJ1;A0A8I6ABQ2	A0A8I6ABQ2_RAT	Bcl2l13	BCL2 like 13	0	SEIEEELK	SEIEEELK	2	SEIEEELK2	114362	130075	145121
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	SEIEVMSEPPEEK	SEIEVMSEPPEEK	2	SEIEVMSEPPEEK2	4795.85	5777.39	
P62890	P62890;M0RD99	RL30_RAT	Rpl30	Large ribosomal subunit protein eL30	0	SEIEYYAMLAK	SEIEYYAMLAK	2	SEIEYYAMLAK2	21961.5	15614.1	31181.5
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	SEIGIAMGSGTAVAK	SEIGIAMGSGTAVAK	2	SEIGIAMGSGTAVAK2	204264	184842	207036
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	SEIGIAMGSGTAVAK	SEIGIAMGSGTAVAK	3	SEIGIAMGSGTAVAK3	3162.33	5495.83	6610.8
A0A0G2QC02	A0A0G2QC02	A0A0G2QC02_RAT	Skic2	Ski2 like RNA helicase	1	SEIHLFLQR	SEIHLFLQR	3	SEIHLFLQR3	3413.54	1905.07	4463.78
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	SEIIPMFSNLASDEQDSVR	SEIIPMFSNLASDEQDSVR	3	SEIIPMFSNLASDEQDSVR3	110265	126209	126288
P0C588	P0C588	CNNM4_RAT	Cnnm4	Metal transporter CNNM4	1	SEILDESDTYTDNR	SEILDESDTYTDNR	2	SEILDESDTYTDNR2	4325.08		
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	SEILMSLR	SEILMSLR	2	SEILMSLR2	24068.3	23458.5	16385.3
P24062	P24062	IGF1R_RAT	Igf1r	Insulin-like growth factor 1 receptor	1	SEILYIR	SEILYIR	2	SEILYIR2	10562.6		7754.39
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	SEIMMFIMGK	SEIMMFIMGK	2	SEIMMFIMGK2	4852.68	6461.92	5385.21
F1LYX9	F1LYX9	F1LYX9_RAT	Dsg2	Desmoglein 2	1	SEIPFLISDSQGFSCLER	SEIPFLISDSQGFSC(UniMod:4)LER	3	SEIPFLISDSQGFSC(UniMod:4)LER3	12435.2	14349	9848.01
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	SEIQAEQDR	SEIQAEQDR	2	SEIQAEQDR2	14531.6	12071.4	
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	SEIQAEQDRK	SEIQAEQDRK	2	SEIQAEQDRK2			9805.73
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	SEIQAEQDRK	SEIQAEQDRK	3	SEIQAEQDRK3			78286.7
Q3MID3	Q3MID3	ARFG2_RAT	Arfgap2	ADP-ribosylation factor GTPase-activating protein 2	1	SEIQTLFK	SEIQTLFK	2	SEIQTLFK2	19172.4	12169.5	11680.3
Q6IFU8	Q6IFV1;Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	0	SEISELR	SEISELR	2	SEISELR2	127070	106907	110808
Q6IFU8	Q6IFV1;Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	0	SEISELRR	SEISELRR	2	SEISELRR2	12071.3	18136.7	3406.1
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	SEISNIAR	SEISNIAR	2	SEISNIAR2	83511.3	76645.9	76254.5
D3ZHW0	D3ZHW0	D3ZHW0_RAT	Dhx29	ATP-dependent RNA helicase DHX29	1	SEISYCQR	SEISYC(UniMod:4)QR	2	SEISYC(UniMod:4)QR2	2959.09	6444.09	4209.59
Q6IFW6	Q6IFW6	K1C10_RAT	Krt10	Keratin, type I cytoskeletal 10	1	SEITELR	SEITELR	2	SEITELR2	1.03533e+06	830350	693245
Q6IFW6	Q6IFW6	K1C10_RAT	Krt10	Keratin, type I cytoskeletal 10	1	SEITELRR	SEITELRR	2	SEITELRR2	81036.5	39716.8	51419.5
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	SEITLVTPKPEK	SEITLVTPKPEK	2	SEITLVTPKPEK2	34663.3	32212.5	26570.2
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	SEITLVTPKPEK	SEITLVTPKPEK	3	SEITLVTPKPEK3	160245	223514	189485
D4ADF6	D4ADF6	D4ADF6_RAT	Zfyve16	Zinc finger FYVE-type containing 16	1	SEITQSPICR	SEITQSPIC(UniMod:4)R	2	SEITQSPIC(UniMod:4)R2		3271.9	5381.19
Q32Q06	Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	1	SEIVGSIK	SEIVGSIK	2	SEIVGSIK2	198724	169441	185112
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	SEIVNMLEGSGR	SEIVNMLEGSGR	2	SEIVNMLEGSGR2	9365.82		5608.12
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	SEIVQLR	SEIVQLR	2	SEIVQLR2	27991.4	27789.4	36752.9
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	SEIYGLVQR	SEIYGLVQR	2	SEIYGLVQR2	25363.2	34857.9	18891.1
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	SEIYLHLIEGR	SEIYLHLIEGR	2	SEIYLHLIEGR2	24100.4	17065.7	16302.4
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	SEIYLHLIEGR	SEIYLHLIEGR	3	SEIYLHLIEGR3	150119	138257	101909
A0A8I6G6W8	A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	SEKETTQVVQETEPESGSQPR	SEKETTQVVQETEPESGSQPR	3	SEKETTQVVQETEPESGSQPR3	3294.23	5398.1	
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	SEKPESCDNVK	SEKPESC(UniMod:4)DNVK	2	SEKPESC(UniMod:4)DNVK2			13097.8
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	SEKPESCDNVK	SEKPESC(UniMod:4)DNVK	3	SEKPESC(UniMod:4)DNVK3			5321.59
F1LXD8	F1LXD8	F1LXD8_RAT	Emilin2	Elastin microfibril interfacer 2	1	SELAEVK	SELAEVK	2	SELAEVK2	7367.49		8347.28
Q6AYB2	Q6AYB2	Q6AYB2_RAT	Sphk2	Sphingosine kinase 2	1	SELALAPAPAPAATHSPLHR	SELALAPAPAPAATHSPLHR	3	SELALAPAPAPAATHSPLHR3	11206.8	12621	6689.84
Q6AYB2	Q6AYB2	Q6AYB2_RAT	Sphk2	Sphingosine kinase 2	1	SELALAPAPAPAATHSPLHR	SELALAPAPAPAATHSPLHR	4	SELALAPAPAPAATHSPLHR4	51916.5	49336	49842.5
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	SELAVSSELDLLK	SELAVSSELDLLK	2	SELAVSSELDLLK2	248380	270129	279459
G3V7K1	G3V7K1	G3V7K1_RAT	Myom2	Myomesin 2	1	SELAYEIFDK	SELAYEIFDK	2	SELAYEIFDK2		2196.85	6386.27
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	SELDLLDIR	SELDLLDIR	2	SELDLLDIR2	139128	134222	148236
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	SELDRELQDR	SELDRELQDR	3	SELDRELQDR3	30690.7	36584.4	40448.5
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	SELEEQQMHLNVGLR	SELEEQQMHLNVGLR	3	SELEEQQMHLNVGLR3	34025.7	41101.6	35121
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	SELEKDVDDETKEPLPAR	SELEKDVDDETKEPLPAR	3	SELEKDVDDETKEPLPAR3	67120.4	86569.2	57121.7
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	SELEKDVDDETKEPLPAR	SELEKDVDDETKEPLPAR	4	SELEKDVDDETKEPLPAR4	137780	137530	133867
P30427	P30427	PLEC_RAT	Plec	Plectin	1	SELELTLGK	SELELTLGK	2	SELELTLGK2	6700.75	3436.43	
F7EYC4	F7EYC4	F7EYC4_RAT	Tom1	Target of myb1 membrane trafficking protein	1	SELEMVNGNVR	SELEMVNGNVR	2	SELEMVNGNVR2	20517.1	17215	16981.1
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	SELFEAFDLFDVR	SELFEAFDLFDVR	2	SELFEAFDLFDVR2	6730.14	8576.57	7394.99
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	SELFGETAR	SELFGETAR	2	SELFGETAR2	58326.6	62880.2	67170.4
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	SELGAEPGHFGVCVDSLTSDK	SELGAEPGHFGVC(UniMod:4)VDSLTSDK	3	SELGAEPGHFGVC(UniMod:4)VDSLTSDK3	54617.5	62487.3	62295.5
P70541	P70541	EI2BG_RAT	Eif2b3	Translation initiation factor eIF-2B subunit gamma	1	SELIPYLVR	SELIPYLVR	2	SELIPYLVR2	68077.5	75067.5	68732
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	SELIQLVAVTQK	SELIQLVAVTQK	2	SELIQLVAVTQK2	15275	11315.9	11148.5
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	SELIQLVAVTQK	SELIQLVAVTQK	3	SELIQLVAVTQK3	3100.23		
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	SELLAHLR	SELLAHLR	2	SELLAHLR2	8541.16	8994.37	5223.95
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	SELLMIIQMETQSSMR	SELLMIIQMETQSSMR	3	SELLMIIQMETQSSMR3	3197.38	9801.19	10277.6
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	SELLPTVR	SELLPTVR	2	SELLPTVR2	69357.4	77261.4	98421.8
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	SELNLMVEK	SELNLMVEK	2	SELNLMVEK2	37766.9	38533.1	41623.1
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	SELPDSIESALQGDER	SELPDSIESALQGDER	2	SELPDSIESALQGDER2	29943	33198.5	23348.9
F1LTR1	F1LTR1	WDR26_RAT	Wdr26	WD repeat-containing protein 26	1	SELPIAELTGHTR	SELPIAELTGHTR	3	SELPIAELTGHTR3	12068.7	10111.4	10599.2
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	SELPLRGDNVFFLQEVK	SELPLRGDNVFFLQEVK	3	SELPLRGDNVFFLQEVK3	16054.8	20265.4	32913.5
D4A1A5	D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	SELPQDPHTEK	SELPQDPHTEK	2	SELPQDPHTEK2	22223.9	18002.4	27141.8
D4A1A5	D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	SELPQDPHTEK	SELPQDPHTEK	3	SELPQDPHTEK3	139199	167858	147798
Q3ZU82	Q3ZU82	GOGA5_RAT	Golga5	Golgin subfamily A member 5	1	SELQDMEAQQVSEAESAR	SELQDMEAQQVSEAESAR	3	SELQDMEAQQVSEAESAR3	5207.41	5831.22	8044.01
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	SELQPGSK	SELQPGSK	2	SELQPGSK2	61581.5	76093.6	73195.4
F7FLB7	F7FLB7;A0A8I6ARW1	F7FLB7_RAT	Anxa11	Annexin	0	SELSGNFEK	SELSGNFEK	2	SELSGNFEK2	185476	170154	194617
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	SELSQNISAR	SELSQNISAR	2	SELSQNISAR2	36213.2	49063.7	43062.2
A0A8I6A2Y2	A0A8I6A2Y2	A0A8I6A2Y2_RAT	Srrm2	Serine/arginine repetitive matrix 2	1	SELSTDPK	SELSTDPK	2	SELSTDPK2	12089.1	11472.8	14968.7
A0A8I6ANL9	A0A8I6ANL9	A0A8I6ANL9_RAT	Cdc23	Cell division cycle 23	1	SELSYLAHNLCEIDK	SELSYLAHNLC(UniMod:4)EIDK	3	SELSYLAHNLC(UniMod:4)EIDK3	37769.1	43176.7	17473.5
A0A8I6ANL9	A0A8I6ANL9	A0A8I6ANL9_RAT	Cdc23	Cell division cycle 23	1	SELSYLAHNLCEIDKYR	SELSYLAHNLC(UniMod:4)EIDKYR	3	SELSYLAHNLC(UniMod:4)EIDKYR3	9584.89	13529.9	7581.35
A0A8I6ANL9	A0A8I6ANL9	A0A8I6ANL9_RAT	Cdc23	Cell division cycle 23	1	SELSYLAHNLCEIDKYR	SELSYLAHNLC(UniMod:4)EIDKYR	4	SELSYLAHNLC(UniMod:4)EIDKYR4	8069.25	9062.78	4037.25
P70483	P70483	STRN_RAT	Strn	Striatin	1	SELTDSASVLDNFK	SELTDSASVLDNFK	2	SELTDSASVLDNFK2	175947	174181	169647
P70483	P70483	STRN_RAT	Strn	Striatin	1	SELTDSASVLDNFK	SELTDSASVLDNFK	3	SELTDSASVLDNFK3	26351.5	27516.2	25927.5
A0A8I5ZTW6	A0A8I5ZTW6	A0A8I5ZTW6_RAT	Gopc	Golgi associated PDZ and coiled-coil motif containing	1	SELTETQAEK	SELTETQAEK	2	SELTETQAEK2	16100.3	32806.4	10580.5
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	SELTQSQTQGSNSNLK	SELTQSQTQGSNSNLK	2	SELTQSQTQGSNSNLK2	5253.73	5625.36	3615.24
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	SELTQSQTQGSNSNLK	SELTQSQTQGSNSNLK	3	SELTQSQTQGSNSNLK3	3298.67	3153.29	
P61212	P61212	ARL1_RAT	Arl1	ADP-ribosylation factor-like protein 1	1	SELVAMLEEEELRK	SELVAMLEEEELRK	2	SELVAMLEEEELRK2	11340.6	6129.37	11202.5
P61212	P61212	ARL1_RAT	Arl1	ADP-ribosylation factor-like protein 1	1	SELVAMLEEEELRK	SELVAMLEEEELRK	3	SELVAMLEEEELRK3	172551	136205	157500
Q62733	Q62733	LAP2_RAT	Tmpo	Lamina-associated polypeptide 2, isoform beta	1	SELVANNVTLPAGEQR	SELVANNVTLPAGEQR	2	SELVANNVTLPAGEQR2	10744.3	8042.66	8865.66
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	SELWVEK	SELWVEK	2	SELWVEK2	23240.6	16749.1	31751.5
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	SELWVYK	SELWVYK	2	SELWVYK2	84792.9	92675.3	104975
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	SEMADLQQEHQR	SEMADLQQEHQR	3	SEMADLQQEHQR3	37258.8	43352.1	41815.9
Q5XI55	Q5XI55	NGLY1_RAT	Ngly1	Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase	1	SEMAQVNLLGDR	SEMAQVNLLGDR	2	SEMAQVNLLGDR2	2489.69	2603.81	4143.75
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	SEMEMAHLYSLCDAAHAQTEVAK	SEMEMAHLYSLC(UniMod:4)DAAHAQTEVAK	3	SEMEMAHLYSLC(UniMod:4)DAAHAQTEVAK3	3676.79	2986.45	5183.6
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	SEMEMAHLYSLCDAAHAQTEVAK	SEMEMAHLYSLC(UniMod:4)DAAHAQTEVAK	4	SEMEMAHLYSLC(UniMod:4)DAAHAQTEVAK4	16039.9	11746.2	17038
M0R402	M0R402	M0R402_RAT	Tmx3	Thioredoxin-related transmembrane protein 3	1	SEMENQEQIEESK	SEMENQEQIEESK	2	SEMENQEQIEESK2	22272.4	31395.4	38276.1
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	SEMEQLK	SEMEQLK	2	SEMEQLK2	41035.1	48183.3	40247.9
Q6AYD3	Q6AYD3	PA2G4_RAT	Pa2g4	Proliferation-associated protein 2G4	1	SEMEVQDAELK	SEMEVQDAELK	2	SEMEVQDAELK2	33923.7	25806	30053.1
P62749	P62749	HPCL1_RAT	Hpcal1	Hippocalcin-like protein 1	1	SEMLEIVQAIYK	SEMLEIVQAIYK	2	SEMLEIVQAIYK2	10600.4	13072.9	13677.2
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	SEMPCQALVK	SEMPC(UniMod:4)QALVK	2	SEMPC(UniMod:4)QALVK2	162174	190807	158974
Q64542	Q64542	AT2B4_RAT	Atp2b4	Plasma membrane calcium-transporting ATPase 4	1	SEMPEEK	SEMPEEK	2	SEMPEEK2	21798.3	27971.3	
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	SEMQPAYEATDFPVWETYLR	SEMQPAYEATDFPVWETYLR	3	SEMQPAYEATDFPVWETYLR3	24263.8	35223	
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	SEMTPAQGK	SEMTPAQGK	1	SEMTPAQGK1		1239.3	
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	SEMTPAQGK	SEMTPAQGK	2	SEMTPAQGK2	62823.8	58874.8	78766.1
M0R8K2	A0A8I5ZR44;M0R8K2	M0R8K2_RAT	Snrpd2l	Small nuclear ribonucleoprotein Sm D2	0	SEMTPEELQK	SEMTPEELQK	2	SEMTPEELQK2		5385.85	3885.05
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	SENDETEYVPK	SENDETEYVPK	2	SENDETEYVPK2	31789.9	35277.2	57410.6
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	SENDLEGR	SENDLEGR	2	SENDLEGR2	25977		
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	SENECVFAR	SENEC(UniMod:4)VFAR	2	SENEC(UniMod:4)VFAR2	3544.24	5109.02	3005.05
P09456	P09456	KAP0_RAT	Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit	1	SENEEFVEVGR	SENEEFVEVGR	2	SENEEFVEVGR2	52600.4	42441.1	46011.1
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	SENELDGMHTGGSSPEALNSLLK	SENELDGMHTGGSSPEALNSLLK	3	SENELDGMHTGGSSPEALNSLLK3	16968.8	19733.4	16080.7
A0A8I6AIH6	A0A8I6AIH6	A0A8I6AIH6_RAT	Suclg2	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial	1	SENEPIENEAAR	SENEPIENEAAR	2	SENEPIENEAAR2	184659	133262	160168
Q9Z2L0	Q9Z2L0;A0A8I5ZWU7;A0A8I6GHL9	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	0	SENGLEFTSSGSANTETTK	SENGLEFTSSGSANTETTK	3	SENGLEFTSSGSANTETTK3	3086.65	4072.64	2285.7
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	SENGSSSSSSTTVQTK	SENGSSSSSSTTVQTK	2	SENGSSSSSSTTVQTK2			2354.96
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	SENISPEEEYK	SENISPEEEYK	2	SENISPEEEYK2	15862.4	14647.5	13040.9
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	SENLENTVIIPDIK	SENLENTVIIPDIK	2	SENLENTVIIPDIK2	27683.4	26899.1	26137.1
A0A8I6APH2	A0A8I6APH2	A0A8I6APH2_RAT	Tgfbrap1	Transforming growth factor, beta receptor associated protein 1	1	SENLIYMYDKMK	SENLIYMYDKMK	2	SENLIYMYDKMK2	8427.26		
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	SENLLLEGK	SENLLLEGK	2	SENLLLEGK2	2708.02	5764.85	5560.46
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	SENNLQEDLFDQILAGK	SENNLQEDLFDQILAGK	2	SENNLQEDLFDQILAGK2		4071.26	3063
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	SENNLQEDLFDQILAGK	SENNLQEDLFDQILAGK	3	SENNLQEDLFDQILAGK3	4990.63	2662.19	5601.13
A0A8I6ABQ2	A0A8I6ABQ2	A0A8I6ABQ2_RAT	Bcl2l13	BCL2 like 13	1	SENNSSNSDIVHVEK	SENNSSNSDIVHVEK	3	SENNSSNSDIVHVEK3	4764.23	2401.4	8566.4
D3ZZ38	D3ZZ38	D3ZZ38_RAT	Snx18	Sorting nexin	1	SENPGEISLR	SENPGEISLR	2	SENPGEISLR2	1919.85	4838.4	6391.52
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	SENRGELGIFVQEIQEGSVAHR	SENRGELGIFVQEIQEGSVAHR	4	SENRGELGIFVQEIQEGSVAHR4		4891.45	
A0A0G2JSI4	A0A0G2JSI4	A0A0G2JSI4_RAT	Adgre5	Adhesion G protein-coupled receptor E5	1	SENTCQASVDTGMIPVPSSIHTVPTAR	SENTC(UniMod:4)QASVDTGMIPVPSSIHTVPTAR	3	SENTC(UniMod:4)QASVDTGMIPVPSSIHTVPTAR3	12990.6	19666.4	19964.5
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	SENTDIPTLLIPAIR	SENTDIPTLLIPAIR	2	SENTDIPTLLIPAIR2	114295	117727	137783
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	SENTDIPTLLIPAIR	SENTDIPTLLIPAIR	3	SENTDIPTLLIPAIR3	17039.4	17104.4	10032.8
A0A0U1RRP3	A0A0U1RRP3	A0A0U1RRP3_RAT	Upf3b	UPF3B, regulator of nonsense mediated mRNA decay	1	SENTESICSLEK	SENTESIC(UniMod:4)SLEK	2	SENTESIC(UniMod:4)SLEK2		2730.55	9163.1
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	SEPEAPGSALSVDLPGLLGQLAR	SEPEAPGSALSVDLPGLLGQLAR	3	SEPEAPGSALSVDLPGLLGQLAR3	2295.79	1025.25	2953.77
Q5XHY7	Q5XHY7	STAM2_RAT	Stam2	Signal transducing adapter molecule 2	1	SEPEPVYIDEGK	SEPEPVYIDEGK	2	SEPEPVYIDEGK2	8799.76	12729.6	7853.6
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	SEPFLSLNSTEDLAEGK	SEPFLSLNSTEDLAEGK	2	SEPFLSLNSTEDLAEGK2	47128.7	39981.9	39254.2
A0A096MJF9	A0A096MJF9	A0A096MJF9_RAT	Tmem132e	Transmembrane protein 132E	1	SEPFVVFQTK	SEPFVVFQTK	2	SEPFVVFQTK2	37556.1	41632.2	49247.2
D3ZLT7	D3ZLT7	D3ZLT7_RAT	Kiaa2013	Similar to RIKEN cDNA 2510039O18	1	SEPGAAEPSACLEAATR	SEPGAAEPSAC(UniMod:4)LEAATR	2	SEPGAAEPSAC(UniMod:4)LEAATR2	15389.6	10258.7	7748.5
A0A8I6AEI1	A0A8I6AEI1	A0A8I6AEI1_RAT	Hps1	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1	1	SEPGSSWELLQICGK	SEPGSSWELLQIC(UniMod:4)GK	2	SEPGSSWELLQIC(UniMod:4)GK2	41524.8	49564.7	43532.8
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	SEPGTVPFDR	SEPGTVPFDR	2	SEPGTVPFDR2	276861	276951	304523
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	SEPIPETNEGPVK	SEPIPETNEGPVK	2	SEPIPETNEGPVK2	1.42915e+06	1.20071e+06	1.395e+06
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	SEPLDAAVIEEELDELRR	SEPLDAAVIEEELDELRR	3	SEPLDAAVIEEELDELRR3	9095.03	10927.6	
P31211	P31211	CBG_RAT	Serpina6	Corticosteroid-binding globulin	1	SEPLDIK	SEPLDIK	2	SEPLDIK2	345817	325971	270123
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	SEPLIGR	SEPLIGR	1	SEPLIGR1	849458	948135	921520
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	SEPLIGR	SEPLIGR	2	SEPLIGR2	6.36661e+07	7.95585e+07	7.81374e+07
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	SEPLIGRK	SEPLIGRK	2	SEPLIGRK2	480141	794267	531041
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	SEPPTLAQPSR	SEPPTLAQPSR	2	SEPPTLAQPSR2	151001	168328	173377
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	SEPPVSEPLDVVGR	SEPPVSEPLDVVGR	2	SEPPVSEPLDVVGR2	206320	221198	179723
A1L1J8	A1L1J8	A1L1J8_RAT	Rab5b	RAB5B, member RAS oncogene family	1	SEPQNPGGAAGR	SEPQNPGGAAGR	2	SEPQNPGGAAGR2	135806		96170.5
D4A7Z5	F7F5S4;D4A7Z5	D4A7Z5_RAT	LOC100360940	Direct IAP-binding protein with low pI	0	SEPQSLSNEALMR	SEPQSLSNEALMR	2	SEPQSLSNEALMR2	22341.4	23821.1	23265.3
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	SEPSDQALIYFR	SEPSDQALIYFR	2	SEPSDQALIYFR2		6356.83	14343.6
Q2THW7	Q2THW7	ZDHC5_RAT	Zdhhc5	Palmitoyltransferase ZDHHC5	1	SEPSLEPESFR	SEPSLEPESFR	2	SEPSLEPESFR2	29458.3	20136.7	29626.1
Q920J4	Q920J4	TXNL1_RAT	Txnl1	Thioredoxin-like protein 1	1	SEPTQALELTEDDIK	SEPTQALELTEDDIK	2	SEPTQALELTEDDIK2	16591.3	16683.7	12365.2
Q920J4	Q920J4	TXNL1_RAT	Txnl1	Thioredoxin-like protein 1	1	SEPTQALELTEDDIKEDGIVPLR	SEPTQALELTEDDIKEDGIVPLR	3	SEPTQALELTEDDIKEDGIVPLR3	76529.9	60011.2	71842.5
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	SEPVAVQK	SEPVAVQK	2	SEPVAVQK2	100882	132700	105261
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	SEPVHPFGLAVYGEHIFWTDWVR	SEPVHPFGLAVYGEHIFWTDWVR	3	SEPVHPFGLAVYGEHIFWTDWVR3	20369.9	18268.1	10181.7
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	SEPVHPFGLAVYGEHIFWTDWVR	SEPVHPFGLAVYGEHIFWTDWVR	4	SEPVHPFGLAVYGEHIFWTDWVR4	35684.1	31359.5	18351.2
Q5PQM2	A0A8I5Y868;Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	0	SEQAVAQLEEEK	SEQAVAQLEEEK	2	SEQAVAQLEEEK2	30309.7	36690.6	27075.6
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	SEQAVAQLEEEKK	SEQAVAQLEEEKK	3	SEQAVAQLEEEKK3	11221.2	19037.1	8273.27
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	SEQDQAENEGEDSAVLMER	SEQDQAENEGEDSAVLMER	3	SEQDQAENEGEDSAVLMER3	39609.8	37821.4	44910.7
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	SEQEEYEAEGIAWEPVQYFNNK	SEQEEYEAEGIAWEPVQYFNNK	3	SEQEEYEAEGIAWEPVQYFNNK3	25122	41761.2	39465.6
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	SEQEHGRLEGCLK	SEQEHGRLEGC(UniMod:4)LK	2	SEQEHGRLEGC(UniMod:4)LK2	11811.5	10158.8	6641.99
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	SEQEHGRLEGCLK	SEQEHGRLEGC(UniMod:4)LK	3	SEQEHGRLEGC(UniMod:4)LK3	243472	361414	267048
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	SEQEHGRLEGCLK	SEQEHGRLEGC(UniMod:4)LK	4	SEQEHGRLEGC(UniMod:4)LK4	188502	245809	270635
A0A8I6A8Y4	A0A8I6A8Y4	A0A8I6A8Y4_RAT	Mtres1	Mitochondrial transcription rescue factor 1	1	SEQGEELEEEPGVVK	SEQGEELEEEPGVVK	2	SEQGEELEEEPGVVK2	2191.03	633.826	3567.68
Q5Y4N8	Q5Y4N8	AGRE1_RAT	Adgre1	Adhesion G protein-coupled receptor E2	1	SEQIEQCQAGQGR	SEQIEQC(UniMod:4)QAGQGR	2	SEQIEQC(UniMod:4)QAGQGR2	22324.5	24676.4	26711.7
A0A8I6A5X2	A0A8I6A5X2	A0A8I6A5X2_RAT	Usp32	ubiquitinyl hydrolase 1	1	SEQILFAEVHSSNIK	SEQILFAEVHSSNIK	3	SEQILFAEVHSSNIK3	5828.63	10977.3	8625.07
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	SEQLHHSMCTR	SEQLHHSMC(UniMod:4)TR	2	SEQLHHSMC(UniMod:4)TR2	4463.27		
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	SEQLHHSMCTR	SEQLHHSMC(UniMod:4)TR	3	SEQLHHSMC(UniMod:4)TR3			7265.52
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	SEQLHNVTAFQGK	SEQLHNVTAFQGK	3	SEQLHNVTAFQGK3	7307.72	5310.22	5300.49
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	SEQLLSTQGDASQVIGPLTEGQK	SEQLLSTQGDASQVIGPLTEGQK	3	SEQLLSTQGDASQVIGPLTEGQK3	12961.6	14180.2	7019.69
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	SEQLQHVVQSQGFISYCQK	SEQLQHVVQSQGFISYC(UniMod:4)QK	3	SEQLQHVVQSQGFISYC(UniMod:4)QK3	10385.9	19412.8	11266.2
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	SEQQAEALDSPQK	SEQQAEALDSPQK	2	SEQQAEALDSPQK2	86257.9	74254.9	92285.1
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	SEQQAEALDSPQKK	SEQQAEALDSPQKK	3	SEQQAEALDSPQKK3	11863.2	13842.8	10858.2
Q62796	Q62796	RBP1_RAT	Ralbp1	RalA-binding protein 1	1	SEQQLQEEEEPER	SEQQLQEEEEPER	2	SEQQLQEEEEPER2	1355.7	847.823	
Q62796	Q62796	RBP1_RAT	Ralbp1	RalA-binding protein 1	1	SEQQLQEEEEPERR	SEQQLQEEEEPERR	3	SEQQLQEEEEPERR3	11647.6	10586.3	9610.35
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	SEQSSMLELLR	SEQSSMLELLR	2	SEQSSMLELLR2	7808.19	11271.8	6184.08
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	SEQSVAQLEEEK	SEQSVAQLEEEK	2	SEQSVAQLEEEK2	34325	55567.4	51720.4
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	SEQSVAQLEEEKK	SEQSVAQLEEEKK	2	SEQSVAQLEEEKK2	7629.66	6432.71	6042.04
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	SEQSVAQLEEEKK	SEQSVAQLEEEKK	3	SEQSVAQLEEEKK3	35052.4	32858.5	44731.7
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	SEQYDTADVPTYEEVTPYRR	SEQYDTADVPTYEEVTPYRR	3	SEQYDTADVPTYEEVTPYRR3	15942.2	10198.7	17734.3
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	SEREEASSWR	SEREEASSWR	3	SEREEASSWR3	24982	28767.4	32233.7
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	SERPPIFEIR	SERPPIFEIR	2	SERPPIFEIR2	9224.08	10641	11242.6
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	SERPPIFEIR	SERPPIFEIR	3	SERPPIFEIR3	684278	826126	743925
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	SESAVEHTDK	SESAVEHTDK	2	SESAVEHTDK2			9813.01
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	SESEDGEREQEEEEK	SESEDGEREQEEEEK	2	SESEDGEREQEEEEK2			1809.86
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	SESEDGEREQEEEEK	SESEDGEREQEEEEK	3	SESEDGEREQEEEEK3			18318.8
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	SESEDGEREQEEEEKDSEK	SESEDGEREQEEEEKDSEK	3	SESEDGEREQEEEEKDSEK3			4733.16
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	SESEDGEREQEEEEKDSEK	SESEDGEREQEEEEKDSEK	4	SESEDGEREQEEEEKDSEK4			21023.6
Q566C7	Q566C7	NUDT3_RAT	Nudt3	Diphosphoinositol polyphosphate phosphohydrolase 1	1	SESEEEVLLVSSSR	SESEEEVLLVSSSR	2	SESEEEVLLVSSSR2	2884.54		1078.25
Q07266	Q07266	DREB_RAT	Dbn1	Drebrin	1	SESEVEEAAAIIAQRPDNPR	SESEVEEAAAIIAQRPDNPR	3	SESEVEEAAAIIAQRPDNPR3		12500.3	10213.1
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	SESFSISGVQPAR	SESFSISGVQPAR	2	SESFSISGVQPAR2	80229.5	74724.9	95641.4
Q8K4V4	Q8K4V4	SNX27_RAT	Snx27	Sorting nexin-27	1	SESGYGFNVR	SESGYGFNVR	2	SESGYGFNVR2	14896.2	16577.2	17135.8
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	SESIRPDEFSLEIFER	SESIRPDEFSLEIFER	3	SESIRPDEFSLEIFER3	17909.7	20462.6	17173.6
A0A0G2JVX9	A0A0G2JVX9	A0A0G2JVX9_RAT	Arpp21	cAMP regulated phosphoprotein 21	1	SESLDEEEK	SESLDEEEK	2	SESLDEEEK2	25690.7	7286.23	
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	SESLGIPQK	SESLGIPQK	2	SESLGIPQK2	61756.7	51549	50316.1
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	SESLHVSHILQK	SESLHVSHILQK	2	SESLHVSHILQK2	4788.7	5246.79	7237.85
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	SESLHVSHILQK	SESLHVSHILQK	3	SESLHVSHILQK3	135620	122557	109992
Q5PQT0	Q5PQT0	Q5PQT0_RAT	Pask	PAS domain containing serine/threonine kinase	1	SESLPAQEGPATQAFVEPSKPLSIAHR	SESLPAQEGPATQAFVEPSKPLSIAHR	4	SESLPAQEGPATQAFVEPSKPLSIAHR4		6218.33	3344.11
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	SESLTAENR	SESLTAENR	2	SESLTAENR2	4385.73	4610	7435.21
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	SESMEITESLVLGLGR	SESMEITESLVLGLGR	2	SESMEITESLVLGLGR2	3839.83	7529.31	2849.53
A0A0G2K712	A0A0G2K712	A0A0G2K712_RAT	Tbc1d5	TBC1 domain family, member 5	1	SESMPVQLNK	SESMPVQLNK	2	SESMPVQLNK2	16993.2	13007.9	14622.1
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	SESQASSEDLWK	SESQASSEDLWK	2	SESQASSEDLWK2	12025	7938.33	6382.19
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	SESSAGVCVPLSTSPQVSEAAHIPSK	SESSAGVC(UniMod:4)VPLSTSPQVSEAAHIPSK	3	SESSAGVC(UniMod:4)VPLSTSPQVSEAAHIPSK3	4267.88	7061.55	3691.8
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	SESSTEAYIR	SESSTEAYIR	2	SESSTEAYIR2	95338.6	104454	92212.1
A0A8J8YNE4	A0A8J8YNE4	A0A8J8YNE4_RAT	Apool	MICOS complex subunit	1	SESTSGTTQFIPDPK	SESTSGTTQFIPDPK	2	SESTSGTTQFIPDPK2	21374.7	27603.9	32354.8
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	SESVANLQSQPSLNSIHSSPGPK	SESVANLQSQPSLNSIHSSPGPK	3	SESVANLQSQPSLNSIHSSPGPK3	77291.8	87809.2	96737.4
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	SESVPTPPK	SESVPTPPK	2	SESVPTPPK2	64038.3	77072.6	66094.6
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	SESYIGGNCYILSGSR	SESYIGGNC(UniMod:4)YILSGSR	2	SESYIGGNC(UniMod:4)YILSGSR2		13493.2	8762.79
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	SETASAYRPQNSK	SETASAYRPQNSK	2	SETASAYRPQNSK2	5622.15		4901.25
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	SETASAYRPQNSK	SETASAYRPQNSK	3	SETASAYRPQNSK3			39563.1
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	SETASSLSQK	SETASSLSQK	2	SETASSLSQK2	9461.06	13436	
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	SETDKETSLVK	SETDKETSLVK	2	SETDKETSLVK2	7045.26	9092.25	1397.33
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	SETDKETSLVK	SETDKETSLVK	3	SETDKETSLVK3	57690.3	42229.3	65777
F7ELS2	F7ELS2;A0A8I6GM53	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	0	SETDTSLIR	SETDTSLIR	2	SETDTSLIR2	614313	698072	697630
D3ZWA8	D3ZWA8	D3ZWA8_RAT	Appl1	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1	1	SETEDSILHQLFIVR	SETEDSILHQLFIVR	3	SETEDSILHQLFIVR3	10851.5	8800.32	
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	SETELKDTYAR	SETELKDTYAR	2	SETELKDTYAR2	3446.81	2614	7395.67
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	SETELKDTYAR	SETELKDTYAR	3	SETELKDTYAR3	14594.2	17417.2	13816.7
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	SETGGMEPGFTFTFR	SETGGMEPGFTFTFR	2	SETGGMEPGFTFTFR2	246664	293150	238060
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	SETGGMEPGFTFTFR	SETGGMEPGFTFTFR	3	SETGGMEPGFTFTFR3	6112.69	2515.66	
Q4V8I7	Q4V8I7	LRC8A_RAT	Lrrc8a	Volume-regulated anion channel subunit LRRC8A	1	SETGVLDK	SETGVLDK	2	SETGVLDK2	16778.5	19592.8	16926.1
P47727	P47727	CBR1_RAT	Cbr1	Carbonyl reductase [NADPH] 1	1	SETITEEELVGLMNK	SETITEEELVGLMNK	2	SETITEEELVGLMNK2	8803.45	7380.43	7556.05
Q9Z1W6	Q9Z1W6	LYRIC_RAT	Mtdh	Protein LYRIC	1	SETNWESPK	SETNWESPK	2	SETNWESPK2	32682.3	39360.7	20325.5
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	SETRPPCVPTPGK	SETRPPC(UniMod:4)VPTPGK	3	SETRPPC(UniMod:4)VPTPGK3	161253	152231	150725
P55260	P55260	ANXA4_RAT	Anxa4	Annexin A4	1	SETSGSFEDALLAIVK	SETSGSFEDALLAIVK	2	SETSGSFEDALLAIVK2	2815.68		3082.25
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	SETTSEEAGDMGK	SETTSEEAGDMGK	2	SETTSEEAGDMGK2	9723.95	6277.04	10884.8
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	SETYAPLFSLPSFHK	SETYAPLFSLPSFHK	3	SETYAPLFSLPSFHK3	8435.87	7706.61	5957.79
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	SEVCTVPAPDKPALSEEEVER	SEVC(UniMod:4)TVPAPDKPALSEEEVER	3	SEVC(UniMod:4)TVPAPDKPALSEEEVER3	9744.58	16873.3	6352.59
Q9Z244	Q9Z244	GMPR1_RAT	Gmpr	GMP reductase 1	1	SEVDLER	SEVDLER	2	SEVDLER2	125237	112494	105240
Q8R431	Q8R431	MGLL_RAT	Mgll	Monoglyceride lipase	1	SEVDLYNSDPLICHAGVK	SEVDLYNSDPLIC(UniMod:4)HAGVK	3	SEVDLYNSDPLIC(UniMod:4)HAGVK3	55883.8	44403.8	50769.3
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	SEVEALR	SEVEALR	2	SEVEALR2	131666	165409	160163
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	SEVEELMNK	SEVEELMNK	2	SEVEELMNK2	52068.7	50976.5	48481.8
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	SEVGAAGPAYR	SEVGAAGPAYR	2	SEVGAAGPAYR2	147968	132090	144964
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SEVHTHWSPTK	SEVHTHWSPTK	2	SEVHTHWSPTK2	107984	100845	112843
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SEVHTHWSPTK	SEVHTHWSPTK	3	SEVHTHWSPTK3	2.1835e+06	2.50189e+06	2.30431e+06
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	SEVLAWNPDNLADYFR	SEVLAWNPDNLADYFR	2	SEVLAWNPDNLADYFR2	270601	311184	320301
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	SEVLAWNPDNLADYFR	SEVLAWNPDNLADYFR	3	SEVLAWNPDNLADYFR3	27206.3	26251.4	31826.6
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	SEVLESEATGTAESEVLR	SEVLESEATGTAESEVLR	2	SEVLESEATGTAESEVLR2	10902.7	15657.7	7368.49
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	SEVLESEATGTAESEVLR	SEVLESEATGTAESEVLR	3	SEVLESEATGTAESEVLR3		3965.13	4712.9
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	SEVLESLNK	SEVLESLNK	2	SEVLESLNK2	2.08552e+06	1.85789e+06	1.9656e+06
Q5EGY4	Q5EGY4	YKT6_RAT	Ykt6	Synaptobrevin homolog YKT6	1	SEVLGTQSK	SEVLGTQSK	2	SEVLGTQSK2	66664.9	61365.2	54998.1
Q9R0C5	Q9R0C5	GALT7_RAT	Galnt7	N-acetylgalactosaminyltransferase 7	1	SEVLHQVFISSCDNGK	SEVLHQVFISSC(UniMod:4)DNGK	3	SEVLHQVFISSC(UniMod:4)DNGK3	7947.67	8985.21	5227.82
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	SEVLQESIR	SEVLQESIR	2	SEVLQESIR2	22141.3	5469.34	20425.1
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	SEVLQESIRK	SEVLQESIRK	3	SEVLQESIRK3	18428	28308.3	25222.4
Q5U303	Q5U303	TAB2_RAT	Tab2	TGF-beta-activated kinase 1 and MAP3K7-binding protein 2	1	SEVNEMENSLTR	SEVNEMENSLTR	2	SEVNEMENSLTR2	9617.19	4572.26	12691.1
F1LU71	F1LU71	AUHM_RAT	Auh	Methylglutaconyl-CoA hydratase, mitochondrial	1	SEVPGIFCAGADLK	SEVPGIFC(UniMod:4)AGADLK	2	SEVPGIFC(UniMod:4)AGADLK2	250603	218740	241864
Q05096	Q05096	MYO1B_RAT	Myo1b	Unconventional myosin-Ib	1	SEVPLVDVTK	SEVPLVDVTK	2	SEVPLVDVTK2	10528.7	18770.7	14239.2
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	SEVQAIIESTPELDMDKDLSGYK	SEVQAIIESTPELDMDKDLSGYK	3	SEVQAIIESTPELDMDKDLSGYK3	33972.7	34746.7	34251.9
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	SEVQNLLPDTITEEEKER	SEVQNLLPDTITEEEKER	3	SEVQNLLPDTITEEEKER3		12254.1	14178.2
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SEVQVESQVLQHNAHFSNDQEEVR	SEVQVESQVLQHNAHFSNDQEEVR	3	SEVQVESQVLQHNAHFSNDQEEVR3	45326	45996.9	50337.6
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SEVQVESQVLQHNAHFSNDQEEVR	SEVQVESQVLQHNAHFSNDQEEVR	4	SEVQVESQVLQHNAHFSNDQEEVR4	81328.7	134401	134504
A0A0G2K618	A0A0G2K618	A0A0G2K618_RAT	Large1	LARGE xylosyl- and glucuronyltransferase 1	1	SEVSWIPNK	SEVSWIPNK	2	SEVSWIPNK2	6387.02	7696.74	4698.6
D4A8E7	D4A8E7	D4A8E7_RAT	Commd6	COMM domain containing 6	1	SEVTGQLVDFQWK	SEVTGQLVDFQWK	2	SEVTGQLVDFQWK2	3685.25	3008.27	5145.83
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	SEVTSQSGLSNSSDSLDSSTRPPSVTR	SEVTSQSGLSNSSDSLDSSTRPPSVTR	3	SEVTSQSGLSNSSDSLDSSTRPPSVTR3	13707.2	11178.4	8226.93
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	SEVVEMVK	SEVVEMVK	2	SEVVEMVK2	62897.3	58368.5	59979.3
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	SEVVLEGK	SEVVLEGK	2	SEVVLEGK2	37166	33550.7	33810.4
P15684	P15684	AMPN_RAT	Anpep	Aminopeptidase N	1	SEVYGPMK	SEVYGPMK	2	SEVYGPMK2	23544.9	18344.2	17465.5
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	SEVYYSGDK	SEVYYSGDK	2	SEVYYSGDK2	100288	81873.6	93215.2
B1WBV4	B1WBV4	B1WBV4_RAT	Plekhf2	Pleckstrin homology and FYVE domain containing 2	1	SEWMNHINK	SEWMNHINK	2	SEWMNHINK2	28672.1	18942.8	18346.2
B1WBV4	B1WBV4	B1WBV4_RAT	Plekhf2	Pleckstrin homology and FYVE domain containing 2	1	SEWMNHINK	SEWMNHINK	3	SEWMNHINK3	99921.7	115761	119519
P47858	P47858	PFKAM_RAT	Pfkm	ATP-dependent 6-phosphofructokinase, muscle type	1	SEWSDLLNDLQK	SEWSDLLNDLQK	2	SEWSDLLNDLQK2	7730.11	4479.24	10286.2
P47858	P47858	PFKAM_RAT	Pfkm	ATP-dependent 6-phosphofructokinase, muscle type	1	SEWSDLLNDLQK	SEWSDLLNDLQK	3	SEWSDLLNDLQK3			1554.03
P34064	P34064	PSA5_RAT	Psma5	Proteasome subunit alpha type-5	1	SEYDRGVNTFSPEGR	SEYDRGVNTFSPEGR	3	SEYDRGVNTFSPEGR3	6606.83		10596
O08874	O08874	PKN2_RAT	Pkn2	Serine/threonine-protein kinase N2	1	SEYELNIPDSSR	SEYELNIPDSSR	2	SEYELNIPDSSR2	20964.6	20616.3	
A0A8I6A0T5	A0A8I6A0T5	A0A8I6A0T5_RAT	Dctn5	Dynactin subunit 5	1	SEYIETASGNK	SEYIETASGNK	2	SEYIETASGNK2	46332.7	40830.6	40049.6
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	SEYIVAEYDAYFEEVK	SEYIVAEYDAYFEEVK	2	SEYIVAEYDAYFEEVK2	33044	27736	30855.2
P15684	P15684	AMPN_RAT	Anpep	Aminopeptidase N	1	SEYMEGGNK	SEYMEGGNK	2	SEYMEGGNK2		3882.83	
P15384	P15384	KCNA3_RAT	Kcna3	Potassium voltage-gated channel subfamily A member 3	1	SEYMVIEEGGMNHSAFPQTPFK	SEYMVIEEGGMNHSAFPQTPFK	3	SEYMVIEEGGMNHSAFPQTPFK3	122147	122450	141052
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	SEYNDQLTR	SEYNDQLTR	2	SEYNDQLTR2	58766.7	62131.3	62815.6
A0A8I6AWS0	A0A8I6AWS0	A0A8I6AWS0_RAT	Npc2	NPC intracellular cholesterol transporter 2	1	SEYPSLK	SEYPSLK	2	SEYPSLK2	34619.8	31274.7	28155
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	SEYRELEDGGLER	SEYRELEDGGLER	3	SEYRELEDGGLER3	12999.5	10143.9	17759.7
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	SEYTSLIPNLK	SEYTSLIPNLK	2	SEYTSLIPNLK2	142151	164542	147922
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	SEYVTVQEFFSTPK	SEYVTVQEFFSTPK	2	SEYVTVQEFFSTPK2	21668.8	16624.3	20223.5
Q5M880	Q5M880	S66A2_RAT	Slc66a2	Solute carrier family 66 member 2	1	SFAATDSK	SFAATDSK	2	SFAATDSK2	21536	17699.3	24770.3
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	SFAATVSR	SFAATVSR	2	SFAATVSR2	62333.7	55281.2	53701.1
Q04970	Q04970	RASN_RAT	Nras	GTPase NRas	1	SFADINLYR	SFADINLYR	2	SFADINLYR2	71473.1	74510.9	75583.4
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	SFADLHPQYQVQR	SFADLHPQYQVQR	2	SFADLHPQYQVQR2	32846.8	46425.9	31760.2
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	SFADLHPQYQVQR	SFADLHPQYQVQR	3	SFADLHPQYQVQR3	394869	355537	409855
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	SFADLITNLR	SFADLITNLR	2	SFADLITNLR2	91775.6	76676.3	85813.4
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	SFADLITNLRK	SFADLITNLRK	3	SFADLITNLRK3	21807.6	23458.6	23892.2
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	SFADLQHK	SFADLQHK	2	SFADLQHK2	6179.25		5471.63
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	SFADLQHKPLLVDLTVEEGQR	SFADLQHKPLLVDLTVEEGQR	3	SFADLQHKPLLVDLTVEEGQR3	26137.5	11914.7	20028.2
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	SFADLQHKPLLVDLTVEEGQR	SFADLQHKPLLVDLTVEEGQR	4	SFADLQHKPLLVDLTVEEGQR4	101934	114964	108926
A0A8I5Y224	A0A8I5Y224	A0A8I5Y224_RAT	Adam9	ADAM metallopeptidase domain 9	1	SFAECAYGDCCK	SFAEC(UniMod:4)AYGDC(UniMod:4)C(UniMod:4)K	2	SFAEC(UniMod:4)AYGDC(UniMod:4)C(UniMod:4)K2	1783	1960.24	6372.78
A0A8I6AEI3	A0A8I6AEI3	A0A8I6AEI3_RAT	Wwox	WW domain-containing oxidoreductase	1	SFALHGAHVILACR	SFALHGAHVILAC(UniMod:4)R	3	SFALHGAHVILAC(UniMod:4)R3	5746.9		3116.94
A0A8I6AEI3	A0A8I6AEI3	A0A8I6AEI3_RAT	Wwox	WW domain-containing oxidoreductase	1	SFALHGAHVILACR	SFALHGAHVILAC(UniMod:4)R	4	SFALHGAHVILAC(UniMod:4)R4	10010.2		13777.9
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	SFANEEGEAQK	SFANEEGEAQK	2	SFANEEGEAQK2	80928	89366	69287.4
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	SFANMDDEENYSAASK	SFANMDDEENYSAASK	2	SFANMDDEENYSAASK2	2168.57	2813.63	
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	SFANTLVDVCAYAGSGNVLK	SFANTLVDVC(UniMod:4)AYAGSGNVLK	3	SFANTLVDVC(UniMod:4)AYAGSGNVLK3	6060.59	6740.83	6677.1
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	SFAPGMSTFR	SFAPGMSTFR	2	SFAPGMSTFR2	73534	94569.1	59961.6
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	SFAPVLPHLAEEVFQHIPYVK	SFAPVLPHLAEEVFQHIPYVK	4	SFAPVLPHLAEEVFQHIPYVK4	9492.13	11806.6	4959.13
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	SFAQAAIEK	SFAQAAIEK	2	SFAQAAIEK2	27022.1	57655.5	36645.2
P14046	Q6IE52;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	SFAQARAFIFIDESHITDAFTWLSK	SFAQARAFIFIDESHITDAFTWLSK	4	SFAQARAFIFIDESHITDAFTWLSK4	11981.5	3977.59	2853.33
P14046	Q6IE52;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	SFAQARAFIFIDESHITDAFTWLSKQQK	SFAQARAFIFIDESHITDAFTWLSKQQK	4	SFAQARAFIFIDESHITDAFTWLSKQQK4	16155.7	11446.8	5502.77
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	SFAVGTLAESIQGLGAASAQFVSR	SFAVGTLAESIQGLGAASAQFVSR	3	SFAVGTLAESIQGLGAASAQFVSR3	7566.26	1091.54	5540.58
B1WBV4	B1WBV4	B1WBV4_RAT	Plekhf2	Pleckstrin homology and FYVE domain containing 2	1	SFAVYAATATEK	SFAVYAATATEK	2	SFAVYAATATEK2	115170	148738	141699
Q6F596	Q6F596	GGPPS_RAT	Ggps1	Geranylgeranyl pyrophosphate synthase	1	SFCEDLTEGK	SFC(UniMod:4)EDLTEGK	2	SFC(UniMod:4)EDLTEGK2	39465.8	38432.1	37292
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	SFCENFLK	SFC(UniMod:4)ENFLK	2	SFC(UniMod:4)ENFLK2	20471.3	29626	21744.1
Q53E76	Q53E76	GTDC1_RAT	Gtdc1	Glycosyltransferase-like domain-containing protein 1	1	SFCERPDIIR	SFC(UniMod:4)ERPDIIR	3	SFC(UniMod:4)ERPDIIR3	11023.6	9585.23	7780.53
A0A8I5ZMX2	A0A8I5ZMX2	A0A8I5ZMX2_RAT	Adamts3	ADAM metallopeptidase with thrombospondin type 1, motif 3	1	SFCEVNK	SFC(UniMod:4)EVNK	2	SFC(UniMod:4)EVNK2	11148.1	10581.6	12539.5
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	SFCPGFPCPGSPGPR	SFC(UniMod:4)PGFPC(UniMod:4)PGSPGPR	2	SFC(UniMod:4)PGFPC(UniMod:4)PGSPGPR2	68181.5	70222.3	83027.3
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	SFCPGGTDSVSPPPSVIAQENLGR	SFC(UniMod:4)PGGTDSVSPPPSVIAQENLGR	3	SFC(UniMod:4)PGGTDSVSPPPSVIAQENLGR3	425948	498960	484960
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	SFCQSYDMK	SFC(UniMod:4)QSYDMK	2	SFC(UniMod:4)QSYDMK2	15355.6	18475	14709.5
A0A8I6B3N0	A0A8I6B3N0;E9PSK7	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	0	SFDAHPR	SFDAHPR	2	SFDAHPR2	5991.52	24903.8	20317.4
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	SFDALLIELTR	SFDALLIELTR	2	SFDALLIELTR2	40489.2	37841.6	34751.8
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	SFDALLIELTR	SFDALLIELTR	3	SFDALLIELTR3	1772.92	1065.51	
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	SFDCEASGQCWCQPGVAGK	SFDC(UniMod:4)EASGQC(UniMod:4)WC(UniMod:4)QPGVAGK	3	SFDC(UniMod:4)EASGQC(UniMod:4)WC(UniMod:4)QPGVAGK3	20910.5	27284	18987.8
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	SFDDEESVDGNRPSSAASAFK	SFDDEESVDGNRPSSAASAFK	3	SFDDEESVDGNRPSSAASAFK3	30302.7	40249.3	29926.2
Q498S0	Q498S0	Q498S0_RAT	Chst12	Carbohydrate sulfotransferase	1	SFDDIPNYELNHLIVDDR	SFDDIPNYELNHLIVDDR	3	SFDDIPNYELNHLIVDDR3	56979	66801.1	58155.3
Q05028	Q05028	PDGFB_RAT	Pdgfb	Platelet-derived growth factor subunit B (Fragment)	1	SFDDLQR	SFDDLQR	2	SFDDLQR2	31831.5	37309.7	35308.6
A0A0G2K7Y9	A0A0G2K7Y9	A0A0G2K7Y9_RAT	Zg16b	Zymogen granule protein 16B	1	SFDDSGGSDK	SFDDSGGSDK	2	SFDDSGGSDK2	11388.7	11166.9	14867.2
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	SFDDSGNGYCR	SFDDSGNGYC(UniMod:4)R	2	SFDDSGNGYC(UniMod:4)R2	12785.5	15523.7	13956.1
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	SFDGNTLLNR	SFDGNTLLNR	2	SFDGNTLLNR2	108216	138367	150624
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	SFDLGHSGGTGQSISVHK	SFDLGHSGGTGQSISVHK	3	SFDLGHSGGTGQSISVHK3	6868.03		4095.64
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	SFDLGHSGGTGQSISVHK	SFDLGHSGGTGQSISVHK	4	SFDLGHSGGTGQSISVHK4	12072.2	16579.5	9353.51
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	SFDLGSPK	SFDLGSPK	2	SFDLGSPK2	95312.2	93180.1	108954
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	SFDLGSPKPGDETTPQGDSADEK	SFDLGSPKPGDETTPQGDSADEK	3	SFDLGSPKPGDETTPQGDSADEK3	161163	140616	140272
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	SFDLGSPKPGDETTPQGDSADEKSK	SFDLGSPKPGDETTPQGDSADEKSK	4	SFDLGSPKPGDETTPQGDSADEKSK4	5297.85	5085.01	5253.47
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	SFDLISHNR	SFDLISHNR	2	SFDLISHNR2	16738.1	14431.2	11010.7
Q6AYK6	Q6AYK6	CYBP_RAT	Cacybp	Calcyclin-binding protein	1	SFDLLVK	SFDLLVK	2	SFDLLVK2	179588	141845	135221
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	SFDLTTPYR	SFDLTTPYR	2	SFDLTTPYR2	74768.1	72600.5	78465.6
Q62632	Q62632	FSTL1_RAT	Fstl1	Follistatin-related protein 1	1	SFDNGDSHLDSSEFLK	SFDNGDSHLDSSEFLK	3	SFDNGDSHLDSSEFLK3	20664.1	21165	32667.7
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	SFDPSKPGK	SFDPSKPGK	1	SFDPSKPGK1	282083	265468	317563
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	SFDPSKPGK	SFDPSKPGK	2	SFDPSKPGK2	23771.7	17814.9	1.68487e+07
Q63159	Q63159	COQ3_RAT	Coq3	Ubiquinone biosynthesis O-methyltransferase, mitochondrial	1	SFDPVLDK	SFDPVLDK	2	SFDPVLDK2	4035.4		
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	SFDPVLEALSR	SFDPVLEALSR	2	SFDPVLEALSR2	40458	52612.6	44516.8
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	SFDSEFK	SFDSEFK	2	SFDSEFK2	179967	253008	213843
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	SFDSLGDLR	SFDSLGDLR	2	SFDSLGDLR2	17752.9	21432	23987.3
Q6AXS4	Q6AXS4	RENR_RAT	Atp6ap2	Renin receptor	1	SFDTSLVR	SFDTSLVR	2	SFDTSLVR2	40255.8	29753.2	40559.6
P81795	C9WPN6;P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	0	SFDVNKPGCEVDDLK	SFDVNKPGC(UniMod:4)EVDDLK	2	SFDVNKPGC(UniMod:4)EVDDLK2	15674.1	12406.9	6626.26
P81795	C9WPN6;P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	0	SFDVNKPGCEVDDLK	SFDVNKPGC(UniMod:4)EVDDLK	3	SFDVNKPGC(UniMod:4)EVDDLK3	269330	243716	303929
P81795	C9WPN6;P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	0	SFDVNKPGCEVDDLKGGVAGGSILK	SFDVNKPGC(UniMod:4)EVDDLKGGVAGGSILK	3	SFDVNKPGC(UniMod:4)EVDDLKGGVAGGSILK3	11059.6	12661.8	10273.7
P81795	C9WPN6;P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	0	SFDVNKPGCEVDDLKGGVAGGSILK	SFDVNKPGC(UniMod:4)EVDDLKGGVAGGSILK	4	SFDVNKPGC(UniMod:4)EVDDLKGGVAGGSILK4	48921	48612.1	38076.7
Q5XIG8	Q5XIG8	STRAP_RAT	Strap	Serine-threonine kinase receptor-associated protein	1	SFEAPATINSASLHPEK	SFEAPATINSASLHPEK	2	SFEAPATINSASLHPEK2	7870.7	10204.1	13661.1
Q5XIG8	Q5XIG8	STRAP_RAT	Strap	Serine-threonine kinase receptor-associated protein	1	SFEAPATINSASLHPEK	SFEAPATINSASLHPEK	3	SFEAPATINSASLHPEK3	62320.4	64506.3	57478.6
A0A8I6A6G8	A0A8I6A6G8	A0A8I6A6G8_RAT	Hm13	Histocompatibility minor 13	1	SFEAPIK	SFEAPIK	2	SFEAPIK2	83088.7	84598.5	71679.6
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	SFECLHPEIK	SFEC(UniMod:4)LHPEIK	2	SFEC(UniMod:4)LHPEIK2	38279.1	40141.6	28944.3
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	SFECLHPEIK	SFEC(UniMod:4)LHPEIK	3	SFEC(UniMod:4)LHPEIK3	540689	553431	552181
P08644	P08644	RASK_RAT	Kras	GTPase KRas	1	SFEDIHHYR	SFEDIHHYR	2	SFEDIHHYR2	6694.49	2117.97	2255.83
P08644	P08644	RASK_RAT	Kras	GTPase KRas	1	SFEDIHHYR	SFEDIHHYR	3	SFEDIHHYR3	66904.8	63557.8	60776.6
P20171	A0A8I6AHV4;P20171	RASH_RAT	Hras	GTPase HRas	0	SFEDIHQYR	SFEDIHQYR	2	SFEDIHQYR2	6892.9	1582.24	3207.79
P20171	A0A8I6AHV4;P20171	RASH_RAT	Hras	GTPase HRas	0	SFEDIHQYR	SFEDIHQYR	3	SFEDIHQYR3	31700.7	26957	39053.2
P27274	P27274	CD59_RAT	Cd59	CD59 glycoprotein	1	SFEDKPNNGAISLLGK	SFEDKPNNGAISLLGK	2	SFEDKPNNGAISLLGK2	4658.77	1804.76	5925.51
P27274	P27274	CD59_RAT	Cd59	CD59 glycoprotein	1	SFEDKPNNGAISLLGK	SFEDKPNNGAISLLGK	3	SFEDKPNNGAISLLGK3	46879.7	52202.5	50731.3
Q9Z1K9	Q9Z1K9	ADA17_RAT	Adam17	Disintegrin and metalloproteinase domain-containing protein 17	1	SFEDLTDHPVTR	SFEDLTDHPVTR	3	SFEDLTDHPVTR3	9924.49		7367.83
D3ZZC1	D3ZZC1	D3ZZC1_RAT	Txndc5	protein disulfide-isomerase	1	SFEDTIAQGITFVK	SFEDTIAQGITFVK	2	SFEDTIAQGITFVK2	28824.8	22591.9	17954.4
D3ZZC1	D3ZZC1	D3ZZC1_RAT	Txndc5	protein disulfide-isomerase	1	SFEDTIAQGITFVK	SFEDTIAQGITFVK	3	SFEDTIAQGITFVK3	5227.87	5330.5	3922.33
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	SFEEAFQK	SFEEAFQK	2	SFEEAFQK2	50095.8	47928.4	40097.4
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	SFEELEFPK	SFEELEFPK	2	SFEELEFPK2	41931.4	45966.9	33315.2
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	SFEFEDIQHFR	SFEFEDIQHFR	2	SFEFEDIQHFR2	5748.74	2628.88	5317.11
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	SFEFEDIQHFR	SFEFEDIQHFR	3	SFEFEDIQHFR3	38494.9	41757.2	31609.8
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	SFEGNLNTYK	SFEGNLNTYK	2	SFEGNLNTYK2	253219	272414	261719
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	SFEGNLNTYKR	SFEGNLNTYKR	3	SFEGNLNTYKR3	21844.8	21538.1	29078.1
Q9QWJ9	Q9QWJ9	NRP1_RAT	Nrp1	Neuropilin-1	1	SFEGNNNYDTPELR	SFEGNNNYDTPELR	2	SFEGNNNYDTPELR2	9032.25	10750.2	4619.46
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	SFEGSNYDVR	SFEGSNYDVR	2	SFEGSNYDVR2	32263.9	23049.3	34631.5
D3ZBX9	D3ZBX9	D3ZBX9_RAT	Ccdc92	Coiled-coil domain containing 92	1	SFELTGDGSSR	SFELTGDGSSR	2	SFELTGDGSSR2	17701.4	17596.1	13867.8
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	SFEMLYK	SFEMLYK	2	SFEMLYK2	164420	187311	191868
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	SFENDAQSSDNINFLK	SFENDAQSSDNINFLK	2	SFENDAQSSDNINFLK2	3258.13	3388.75	5279.89
P35286	P35286	RAB13_RAT	Rab13	Ras-related protein Rab-13	1	SFENIQNWMK	SFENIQNWMK	2	SFENIQNWMK2	40208.6	22742.9	47222.8
P35281	P35281	RAB10_RAT	Rab10	Ras-related protein Rab-10	1	SFENISK	SFENISK	1	SFENISK1	11536.3	3249.1	3098.29
P35281	P35281	RAB10_RAT	Rab10	Ras-related protein Rab-10	1	SFENISK	SFENISK	2	SFENISK2	948841	952326	1.06194e+06
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	SFENNWK	SFENNWK	2	SFENNWK2	43358.2	45185.9	42321.4
A0A0G2K542	A0A0G2K542	A0A0G2K542_RAT	Ugp2	UTP--glucose-1-phosphate uridylyltransferase	1	SFENSLGINVPR	SFENSLGINVPR	2	SFENSLGINVPR2	18880.7	15945.2	20110.8
A0A8I5ZKS4	A0A8I5ZKS4	A0A8I5ZKS4_RAT	Hycc1	Family with sequence similarity 126, member A	1	SFEQVSGVPGPR	SFEQVSGVPGPR	2	SFEQVSGVPGPR2	12436.2	7229.17	8252.1
B5DEH0	B5DEH0	LIMD1_RAT	Limd1	LIM domain-containing protein 1	1	SFESGQDSGIGGHSSEKPTGLWSTASSQR	SFESGQDSGIGGHSSEKPTGLWSTASSQR	4	SFESGQDSGIGGHSSEKPTGLWSTASSQR4	7723.25	2414.71	10387.4
Q6AY20	Q6AY20;A0A8I6A547	MPRD_RAT	M6pr	Cation-dependent mannose-6-phosphate receptor	0	SFESTVGQGSDTYSYIFR	SFESTVGQGSDTYSYIFR	3	SFESTVGQGSDTYSYIFR3	20739.2	24662.5	25831.1
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	SFEWLSQMR	SFEWLSQMR	2	SFEWLSQMR2	92058.1	120731	121587
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	SFEYIQDYVNIYGLK	SFEYIQDYVNIYGLK	2	SFEYIQDYVNIYGLK2	6916.31	7978.94	9557.43
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	SFEYIQDYVNIYGLK	SFEYIQDYVNIYGLK	3	SFEYIQDYVNIYGLK3		4690.99	3855.74
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	SFFDDEEDHWK	SFFDDEEDHWK	3	SFFDDEEDHWK3	14068.4	11551	15278.1
D4A8B0	D4A8B0	D4A8B0_RAT	Sec14l5	SEC14-like lipid binding 5	1	SFFGFESTLEK	SFFGFESTLEK	2	SFFGFESTLEK2	9826.76	11698.5	8451.53
F1LR42	F1LR42	F1LR42_RAT	Rufy1	RUN and FYVE domain containing 1	1	SFFGPLELVEK	SFFGPLELVEK	2	SFFGPLELVEK2	16854.4	15953.8	14531.1
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	SFFHQHYLGGQEPTSSNIR	SFFHQHYLGGQEPTSSNIR	3	SFFHQHYLGGQEPTSSNIR3	73824.5	82253.8	60185.3
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	SFFHQHYLGGQEPTSSNIR	SFFHQHYLGGQEPTSSNIR	4	SFFHQHYLGGQEPTSSNIR4	56888.8	63445.2	60541.9
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	SFFLQPGER	SFFLQPGER	2	SFFLQPGER2	282772	270431	291622
D3ZAI6	D3ZAI6	D3ZAI6_RAT	Nt5dc3	5'-nucleotidase domain containing 3	1	SFFNAQFGSLFR	SFFNAQFGSLFR	2	SFFNAQFGSLFR2	6137.33	5240.4	5537.58
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	SFFPENWLWK	SFFPENWLWK	2	SFFPENWLWK2	1.07031e+07	1.15114e+07	9.66024e+06
P08649	P08649	CO4_RAT	C4	Complement C4	1	SFFPENWLWR	SFFPENWLWR	2	SFFPENWLWR2	2.06213e+07	2.30201e+07	2.21403e+07
P08649	P08649	CO4_RAT	C4	Complement C4	1	SFFPENWLWR	SFFPENWLWR	3	SFFPENWLWR3	27275.7	31554.5	41276.4
P08649	P08649	CO4_RAT	C4	Complement C4	1	SFFPENWLWRVEPVDR	SFFPENWLWRVEPVDR	3	SFFPENWLWRVEPVDR3	21064.5	17255	15019.9
Q5M860	Q5M860	Q5M860_RAT	Arhgdib	Rho GDP dissociation inhibitor beta	1	SFFTDDDK	SFFTDDDK	2	SFFTDDDK2	37066.7	38804.8	41292.9
Q3B7D2	Q3B7D2	SPTC2_RAT	Sptlc2	Serine palmitoyltransferase 2	1	SFGASGGYIGGK	SFGASGGYIGGK	2	SFGASGGYIGGK2	8934.69	11406.2	12602.5
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	SFGELVHKPLLVDLTVEEGQR	SFGELVHKPLLVDLTVEEGQR	3	SFGELVHKPLLVDLTVEEGQR3			4620.46
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	SFGELVHKPLLVDLTVEEGQR	SFGELVHKPLLVDLTVEEGQR	4	SFGELVHKPLLVDLTVEEGQR4	3946.25	10616.7	
Q03346	Q03346	MPPB_RAT	Pmpcb	Mitochondrial-processing peptidase subunit beta	1	SFGGGMNLSSK	SFGGGMNLSSK	2	SFGGGMNLSSK2	29934.2	17849.2	24961.7
F1LUM5	F1LUM5	F1LUM5_RAT	Tubal3	Tubulin alpha chain	1	SFGGGTGSGFTSLLMER	SFGGGTGSGFTSLLMER	2	SFGGGTGSGFTSLLMER2	140580	126942	120220
F1LUM5	F1LUM5	F1LUM5_RAT	Tubal3	Tubulin alpha chain	1	SFGGGTGSGFTSLLMER	SFGGGTGSGFTSLLMER	3	SFGGGTGSGFTSLLMER3	4658.09	9097.25	5675.15
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SFGGNKK	SFGGNKK	1	SFGGNKK1			36986.9
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	SFGGVTHGLPEK	SFGGVTHGLPEK	3	SFGGVTHGLPEK3	24357.1	29692.7	24752
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	SFGGVTHGLPEKK	SFGGVTHGLPEKK	3	SFGGVTHGLPEKK3	34107.7	46624.9	36330.4
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	SFGLFSK	SFGLFSK	2	SFGLFSK2	19926.6	15759.5	19174.4
P14882	P14882	PCCA_RAT	Pcca	Propionyl-CoA carboxylase alpha chain, mitochondrial	1	SFGLPSIGR	SFGLPSIGR	2	SFGLPSIGR2	88005.7	81262.8	74575.8
D3ZZL3	D3ZZL3	D3ZZL3_RAT	Naglu	N-acetyl-alpha-glucosaminidase	1	SFGMTPVLPAFAGHVPK	SFGMTPVLPAFAGHVPK	3	SFGMTPVLPAFAGHVPK3	39459	26714.4	33202.3
D3ZUZ4	D3ZUZ4	D3ZUZ4_RAT	Fam20b	FAM20B, glycosaminoglycan xylosylkinase	1	SFGNPSLDER	SFGNPSLDER	2	SFGNPSLDER2	20717.4	9855.93	19958.8
B2RYB1	B2RYB1	B2RYB1_RAT	Txndc11	Thioredoxin domain containing 11	1	SFGPIEYK	SFGPIEYK	2	SFGPIEYK2	9666.25		
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	SFGQTPSQLLIEPHPPR	SFGQTPSQLLIEPHPPR	3	SFGQTPSQLLIEPHPPR3	7582.87	7384.25	17004.6
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	SFGSAQEFAWAHDSSEYAIR	SFGSAQEFAWAHDSSEYAIR	3	SFGSAQEFAWAHDSSEYAIR3	33853.5	33042.6	49865.4
P29975	P29975	AQP1_RAT	Aqp1	Aquaporin-1	1	SFGSAVLTR	SFGSAVLTR	2	SFGSAVLTR2	1.6553e+06	1.64792e+06	1.70951e+06
Q5EB62	Q5EB62	S2546_RAT	Slc25a46	Mitochondrial outer membrane protein SLC25A46	1	SFGSGTELGHWVTTPPDIPGSR	SFGSGTELGHWVTTPPDIPGSR	3	SFGSGTELGHWVTTPPDIPGSR3	25222.7	17312	20749.8
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	SFGVQPCVSTALEEPSR	SFGVQPC(UniMod:4)VSTALEEPSR	2	SFGVQPC(UniMod:4)VSTALEEPSR2	72834.9	74619.1	75694.2
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	SFGVQPCVSTALEEPSR	SFGVQPC(UniMod:4)VSTALEEPSR	3	SFGVQPC(UniMod:4)VSTALEEPSR3	19540.8	22332.8	19888.4
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	SFGWETLDSFMQHDVQELCR	SFGWETLDSFMQHDVQELC(UniMod:4)R	3	SFGWETLDSFMQHDVQELC(UniMod:4)R3	8284.22		7631.33
A0A8I5ZRG3	A0A8I5ZRG3	A0A8I5ZRG3_RAT	Frmd4b	FERM domain containing 4B	1	SFHEDEVDRVPHNPYATLR	SFHEDEVDRVPHNPYATLR	4	SFHEDEVDRVPHNPYATLR4	11741.6	13257.6	22491
Q2THW7	Q2THW7	ZDHC5_RAT	Zdhhc5	Palmitoyltransferase ZDHHC5	1	SFHFDPLSSGSR	SFHFDPLSSGSR	2	SFHFDPLSSGSR2	3066.96	4212.83	4399.07
Q2THW7	Q2THW7	ZDHC5_RAT	Zdhhc5	Palmitoyltransferase ZDHHC5	1	SFHFDPLSSGSR	SFHFDPLSSGSR	3	SFHFDPLSSGSR3		13657.5	
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	SFHIFYQLIEGASPEQK	SFHIFYQLIEGASPEQK	3	SFHIFYQLIEGASPEQK3	25775.4	29132.8	31341.7
Q63377	Q63377	AT1B3_RAT	Atp1b3	Sodium/potassium-transporting ATPase subunit beta-3	1	SFHQSLAEWK	SFHQSLAEWK	2	SFHQSLAEWK2	26587.5	15607.2	19929.3
Q63377	Q63377	AT1B3_RAT	Atp1b3	Sodium/potassium-transporting ATPase subunit beta-3	1	SFHQSLAEWK	SFHQSLAEWK	3	SFHQSLAEWK3	110698	101478	107423
Q5RJQ0	Q5RJQ0	CHST1_RAT	Chst1	Carbohydrate sulfotransferase 1	1	SFHTCPGLTETGLAER	SFHTC(UniMod:4)PGLTETGLAER	3	SFHTC(UniMod:4)PGLTETGLAER3	11221.7	14854.9	7433.1
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	SFIAMDTK	SFIAMDTK	2	SFIAMDTK2	15299	14831.5	16465.1
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	SFIASQGTGNSCGR	SFIASQGTGNSC(UniMod:4)GR	2	SFIASQGTGNSC(UniMod:4)GR2	39304.2	42053	43442.5
F1M3G7	F1M3G7	AKP13_RAT	Akap13	A-kinase anchor protein 13	1	SFIDVGLGTECATK	SFIDVGLGTEC(UniMod:4)ATK	2	SFIDVGLGTEC(UniMod:4)ATK2	10693.9	3833.4	4521.59
F1LR42	F1LR42	F1LR42_RAT	Rufy1	RUN and FYVE domain containing 1	1	SFIGQNK	SFIGQNK	2	SFIGQNK2	26281.3		33300.8
Q5BJR4	Q5BJR4	PRUN2_RAT	Prune2	Protein prune homolog 2	1	SFIIVHPSWFIR	SFIIVHPSWFIR	2	SFIIVHPSWFIR2	27941.9	39323.3	34755.2
Q5BJR4	Q5BJR4	PRUN2_RAT	Prune2	Protein prune homolog 2	1	SFIIVHPSWFIR	SFIIVHPSWFIR	3	SFIIVHPSWFIR3	51407.4	57886.7	58763.8
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	SFILDFMLR	SFILDFMLR	2	SFILDFMLR2	33556.6	38961.5	34100.3
O55171	O55171;O88267	ACOT2_RAT	Acot2	Acyl-coenzyme A thioesterase 2, mitochondrial	0	SFIPVER	SFIPVER	2	SFIPVER2	75266.1	58672.7	72375.2
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	SFITTDVNPYYDSFVR	SFITTDVNPYYDSFVR	2	SFITTDVNPYYDSFVR2	11081.9	16279.5	14946.8
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	SFITTDVNPYYDSFVR	SFITTDVNPYYDSFVR	3	SFITTDVNPYYDSFVR3	2373.57		4708.73
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	SFKPDFGAESIYGGFLLGVR	SFKPDFGAESIYGGFLLGVR	3	SFKPDFGAESIYGGFLLGVR3	131504	149986	144468
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	SFLAFFVNR	SFLAFFVNR	2	SFLAFFVNR2	13324.6	15235	11015.2
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	SFLALDWDPDLK	SFLALDWDPDLK	2	SFLALDWDPDLK2	25034.5	15801.4	14291.8
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	SFLALDWDPDLKK	SFLALDWDPDLKK	2	SFLALDWDPDLKK2	9217.22	11928.6	13867.9
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	SFLALDWDPDLKK	SFLALDWDPDLKK	3	SFLALDWDPDLKK3	41623.4	60872.5	44270.6
D3ZVC4	D3ZVC4	D3ZVC4_RAT	Arel1	Apoptosis resistant E3 ubiquitin protein ligase 1	1	SFLAQIIGLR	SFLAQIIGLR	2	SFLAQIIGLR2	4025.15	7419.28	7231.46
D3ZKQ3	D3ZKQ3	D3ZKQ3_RAT	Glmn	Glomulin, FKBP associated protein	1	SFLAVPQGLVK	SFLAVPQGLVK	2	SFLAVPQGLVK2	7450.35	6584.87	7663.8
O09014	O09014	S15A4_RAT	Slc15a4	Solute carrier family 15 member 4	1	SFLCGDPHPELVR	SFLC(UniMod:4)GDPHPELVR	3	SFLC(UniMod:4)GDPHPELVR3	13267.2	16693.7	8498.4
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	SFLDGIYK	SFLDGIYK	2	SFLDGIYK2	49341.1	48403.7	77847.6
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	SFLDSGYR	SFLDSGYR	2	SFLDSGYR2	1.3261e+06	1.07636e+06	1.17371e+06
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	SFLEDTTVPK	SFLEDTTVPK	2	SFLEDTTVPK2	46512.8	56057.2	52272.5
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	SFLEDTTVPKDK	SFLEDTTVPKDK	3	SFLEDTTVPKDK3	6597.28	9679.3	7980.11
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	SFLEEVLASGLHSR	SFLEEVLASGLHSR	3	SFLEEVLASGLHSR3	44991.1	29945	30403.8
A0A0U1RRU5	A0A0U1RRU5	A0A0U1RRU5_RAT	Tab1	TGF-beta activated kinase 1/MAP3K7 binding protein 1	1	SFLESIDDALAEK	SFLESIDDALAEK	2	SFLESIDDALAEK2	14077.9	7703.7	17617.6
Q3B7D1	Q3B7D1	UBE2Z_RAT	Ube2z	Ubiquitin-conjugating enzyme E2 Z	1	SFLEYYDFYEVACK	SFLEYYDFYEVAC(UniMod:4)K	2	SFLEYYDFYEVAC(UniMod:4)K2	17000.4	12638	13616.6
Q3B7D1	Q3B7D1	UBE2Z_RAT	Ube2z	Ubiquitin-conjugating enzyme E2 Z	1	SFLEYYDFYEVACKDR	SFLEYYDFYEVAC(UniMod:4)KDR	3	SFLEYYDFYEVAC(UniMod:4)KDR3	10716.8	3211.95	12812.2
Q9QWG5	Q9QWG5	INP4B_RAT	Inpp4b	Type II inositol 3,4-bisphosphate 4-phosphatase	1	SFLGCASFK	SFLGC(UniMod:4)ASFK	2	SFLGC(UniMod:4)ASFK2	9225.32	18443.5	11339.1
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	SFLGTSGELSVK	SFLGTSGELSVK	2	SFLGTSGELSVK2	10666.8	9666.27	
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	SFLHLESLPDK	SFLHLESLPDK	3	SFLHLESLPDK3	12970.4	10017.3	6048.54
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	SFLHLESLPDKLR	SFLHLESLPDKLR	4	SFLHLESLPDKLR4	3795.04	5141.52	2565.7
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	SFLIGVVVPDPESLPSFAAK	SFLIGVVVPDPESLPSFAAK	3	SFLIGVVVPDPESLPSFAAK3	7232.61	8223.69	9031.57
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	SFLIHIK	SFLIHIK	2	SFLIHIK2	14047	11559.1	
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	SFLINFIHTLENQR	SFLINFIHTLENQR	3	SFLINFIHTLENQR3	4639.88		6656
F1LQ09	F1LQ09	F1LQ09_RAT	Atl2	Atlastin GTPase 2	1	SFLLDFMLR	SFLLDFMLR	2	SFLLDFMLR2	33556.6	38961.5	34100.3
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	SFLLDLLNATGK	SFLLDLLNATGK	2	SFLLDLLNATGK2	33087.3	29299.4	31560.7
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	SFLLKDPETSQR	SFLLKDPETSQR	2	SFLLKDPETSQR2	3757.87	7356.32	7761.02
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	SFLLKDPETSQR	SFLLKDPETSQR	3	SFLLKDPETSQR3	24778.8	40869.4	43008.5
Q66H54	Q66H54	FHI1B_RAT	Fhip1b	FHF complex subunit HOOK-interacting protein 1B	1	SFLLNTNMVFQPSVK	SFLLNTNMVFQPSVK	2	SFLLNTNMVFQPSVK2	5751.94		11044.6
Q5FVH2	Q5FVH2	PLD3_RAT	Pld3	5'-3' exonuclease PLD3	1	SFLLSLAALR	SFLLSLAALR	2	SFLLSLAALR2	2895.83	1929.23	2138.61
M0RCP2	M0RCP2	M0RCP2_RAT	Sh3pxd2b	SH3 and PX domains 2B	1	SFLPGEGPGR	SFLPGEGPGR	2	SFLPGEGPGR2	22444.1	29981.7	22032.6
P29147	P29147	BDH_RAT	Bdh1	D-beta-hydroxybutyrate dehydrogenase, mitochondrial	1	SFLPLLR	SFLPLLR	2	SFLPLLR2	55559.9	52135.3	80663.6
D3ZK09	D3ZK09	D3ZK09_RAT	Scyl3	SCY1 like pseudokinase 3	1	SFLPYLLGPK	SFLPYLLGPK	2	SFLPYLLGPK2	50817.6	46488.3	40965.9
P97612	P97612	FAAH1_RAT	Faah	Fatty-acid amide hydrolase 1	1	SFLQNFK	SFLQNFK	2	SFLQNFK2	17437.6	12151	16834.8
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	SFLSSTSTTAK	SFLSSTSTTAK	2	SFLSSTSTTAK2	60106.9	70360	75534.7
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	SFLSVHGK	SFLSVHGK	1	SFLSVHGK1		2000.72	
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	SFLSVHGK	SFLSVHGK	2	SFLSVHGK2	124132	112757	124864
P54001	P54001	P4HA1_RAT	P4ha1	Prolyl 4-hydroxylase subunit alpha-1	1	SFLTAEDCFELGK	SFLTAEDC(UniMod:4)FELGK	2	SFLTAEDC(UniMod:4)FELGK2	19307.7	11138.7	14512.7
Q8K3L6	Q8K3L6	GIMA5_RAT	Gimap5	GTPase IMAP family member 5	1	SFLVVDTPPIFESK	SFLVVDTPPIFESK	2	SFLVVDTPPIFESK2	10737.5	12012.4	17821.1
Q5M9G3	Q5M9G3	CAPR1_RAT	Caprin1	Caprin-1	1	SFMALSQDIQK	SFMALSQDIQK	2	SFMALSQDIQK2	49692	61413.3	57140.9
A0A8I6A8L3	A0A8I6A8L3	A0A8I6A8L3_RAT	Dnpep	Aspartyl aminopeptidase	1	SFMISADMAHAVHPNYSDK	SFMISADMAHAVHPNYSDK	3	SFMISADMAHAVHPNYSDK3	11402.3	13684.2	20896
A0A8I6A8L3	A0A8I6A8L3	A0A8I6A8L3_RAT	Dnpep	Aspartyl aminopeptidase	1	SFMISADMAHAVHPNYSDK	SFMISADMAHAVHPNYSDK	4	SFMISADMAHAVHPNYSDK4	25691.1	27019.8	23657.6
Q8R478	Q8R478	WBP2_RAT	Wbp2	WW domain-binding protein 2	1	SFMMPFYLMK	SFMMPFYLMK	2	SFMMPFYLMK2	3670.91	3216.13	7545.35
P47858	P47858	PFKAM_RAT	Pfkm	ATP-dependent 6-phosphofructokinase, muscle type	1	SFMNNWEVYK	SFMNNWEVYK	2	SFMNNWEVYK2	30977.5	29976.3	22818.7
Q5I0C3	Q5I0C3	MCCA_RAT	Mccc1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	1	SFNDDAMLIEK	SFNDDAMLIEK	2	SFNDDAMLIEK2	18034.7	15884.1	14429.9
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	SFNLSALEK	SFNLSALEK	2	SFNLSALEK2	188960	158742	196104
P01836	P01835;F1LTN6;P01836	KACA_RAT		Ig kappa chain C region, A allele	0	SFNRNEC	SFNRNEC(UniMod:4)	1	SFNRNEC(UniMod:4)1	11652.5		
P01836	P01835;F1LTN6;P01836	KACA_RAT		Ig kappa chain C region, A allele	0	SFNRNEC	SFNRNEC(UniMod:4)	2	SFNRNEC(UniMod:4)2	46114.9		62580.3
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	SFNTVPYIVGFNK	SFNTVPYIVGFNK	2	SFNTVPYIVGFNK2	511836	552714	556186
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	SFNTVPYIVGFNK	SFNTVPYIVGFNK	3	SFNTVPYIVGFNK3	14273.1	16370.8	21419.8
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	SFPAAVEHTIQWAR	SFPAAVEHTIQWAR	2	SFPAAVEHTIQWAR2	10473.6	13794.3	4321.86
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	SFPAAVEHTIQWAR	SFPAAVEHTIQWAR	3	SFPAAVEHTIQWAR3	36494.6	55813.9	36348
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	SFPAITALEWSPSHNLK	SFPAITALEWSPSHNLK	2	SFPAITALEWSPSHNLK2		6980.98	9119.94
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	SFPAITALEWSPSHNLK	SFPAITALEWSPSHNLK	3	SFPAITALEWSPSHNLK3	28616.7	30572.4	30767.2
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	SFPALTELVLAAR	SFPALTELVLAAR	2	SFPALTELVLAAR2	18747	22247.7	26326.3
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	SFPGPLGK	SFPGPLGK	2	SFPGPLGK2	43352.3	40846.5	43707.3
A0A0G2K1T3	A0A0G2K1T3	A0A0G2K1T3_RAT	Sbf2	SET binding factor 2	1	SFPIASITK	SFPIASITK	2	SFPIASITK2	4110.53		
G3V6Q3	A0A8I5Y6K0;G3V6Q3	G3V6Q3_RAT	Wdr13	Uncharacterized protein	0	SFPIEQSSHPVR	SFPIEQSSHPVR	3	SFPIEQSSHPVR3	23535	19550	17255.3
Q8R4A1	Q8R4A1	ERO1A_RAT	Ero1a	ERO1-like protein alpha	1	SFPLHFDENSFFAGDK	SFPLHFDENSFFAGDK	3	SFPLHFDENSFFAGDK3	29074.7	36976.3	20119.1
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	SFPQNPVELK	SFPQNPVELK	2	SFPQNPVELK2	34764.5	65110.7	47951.8
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	SFPSPTQCSHCTSLMVGLIR	SFPSPTQC(UniMod:4)SHC(UniMod:4)TSLMVGLIR	3	SFPSPTQC(UniMod:4)SHC(UniMod:4)TSLMVGLIR3	88959.8	74265.9	66261.8
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	SFPVAALTK	SFPVAALTK	2	SFPVAALTK2	32156.1	34415.2	32505.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SFPVGNTVFDLNK	SFPVGNTVFDLNK	2	SFPVGNTVFDLNK2	1.839e+06	1.98e+06	2.05189e+06
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	SFPVNSDVGVLK	SFPVNSDVGVLK	2	SFPVNSDVGVLK2	374943	243320	389542
P08721	P08721	OSTP_RAT	Spp1	Osteopontin	1	SFPVSDEQYPDATDEDLTSR	SFPVSDEQYPDATDEDLTSR	3	SFPVSDEQYPDATDEDLTSR3	26044.8	46661.7	40629.2
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	SFQEILQIVSPAR	SFQEILQIVSPAR	2	SFQEILQIVSPAR2	15972.4	13007	12081.2
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	SFQEILQIVSPAR	SFQEILQIVSPAR	3	SFQEILQIVSPAR3	5552.34	2841.73	3959.42
P53565	P53565;A0A8I5ZR58	CUX1_RAT	Cux1	Homeobox protein cut-like 1	0	SFQGEIDALSK	SFQGEIDALSK	2	SFQGEIDALSK2	12259.3	13626.4	12338.6
O70540	O70540	MADCA_RAT	Madcam1	Mucosal addressin cell adhesion molecule 1	1	SFQHSVK	SFQHSVK	2	SFQHSVK2			12735.3
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	SFQIQASTMPVSHISQK	SFQIQASTMPVSHISQK	2	SFQIQASTMPVSHISQK2	5983.07	9059.44	10879.4
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	SFQIQASTMPVSHISQK	SFQIQASTMPVSHISQK	3	SFQIQASTMPVSHISQK3	38094.2	44393.5	38028.8
P08460	P08460	NID1_RAT	Nid1	Nidogen-1 (Fragment)	1	SFQLPVER	SFQLPVER	2	SFQLPVER2	1.63103e+06	1.74396e+06	1.7403e+06
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	SFQNYIR	SFQNYIR	2	SFQNYIR2	771891	831425	839043
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	SFQPLGPGYGMSQSSR	SFQPLGPGYGMSQSSR	2	SFQPLGPGYGMSQSSR2	10451.2	13924.1	10478.1
Q9JHB5	Q9JHB5	TSNAX_RAT	Tsnax	Translin-associated protein X	1	SFQQELDTR	SFQQELDTR	2	SFQQELDTR2	16373.6	4755.95	
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	SFQQLTMEK	SFQQLTMEK	2	SFQQLTMEK2	93276.3	96999.7	86798.3
D3ZZA8	D3ZZA8	D3ZZA8_RAT	Sec24a	SEC24 homolog A, COPII coat complex component	1	SFQTGTNVR	SFQTGTNVR	2	SFQTGTNVR2	12141.3	4466.34	7112.01
Q499P3	Q499P3	C1GLC_RAT	C1galt1c1	C1GALT1-specific chaperone 1	1	SFQVYCIVLVKPK	SFQVYC(UniMod:4)IVLVKPK	3	SFQVYC(UniMod:4)IVLVKPK3	2900.47		5162.71
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	SFQYHSK	SFQYHSK	1	SFQYHSK1	17176.9	10493.8	14639.5
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	SFQYHSK	SFQYHSK	2	SFQYHSK2	529129	439147	466155
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	SFREEQCVSFNSR	SFREEQC(UniMod:4)VSFNSR	2	SFREEQC(UniMod:4)VSFNSR2	3051.44	985.581	
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	SFREEQCVSFNSR	SFREEQC(UniMod:4)VSFNSR	3	SFREEQC(UniMod:4)VSFNSR3	107845	140182	29230.6
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	SFSAPATHAYGHETPLR	SFSAPATHAYGHETPLR	4	SFSAPATHAYGHETPLR4	228787	294773	231908
P22273	P22273	IL6RA_RAT	Il6r	Interleukin-6 receptor subunit alpha	1	SFSCEVEILEGDK	SFSC(UniMod:4)EVEILEGDK	2	SFSC(UniMod:4)EVEILEGDK2	9339.13	8290.74	8926.62
D4A7B6	D4A7B6	D4A7B6_RAT	Tmem87b	Transmembrane protein 87B	1	SFSCSGPVK	SFSC(UniMod:4)SGPVK	2	SFSC(UniMod:4)SGPVK2	14776.8	11373.6	14813.8
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	SFSCTCAPGYEGK	SFSC(UniMod:4)TC(UniMod:4)APGYEGK	2	SFSC(UniMod:4)TC(UniMod:4)APGYEGK2	48599.5	58547.8	56467.2
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	SFSCTCAPGYEGK	SFSC(UniMod:4)TC(UniMod:4)APGYEGK	3	SFSC(UniMod:4)TC(UniMod:4)APGYEGK3	40873.5	39170.6	53185.4
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	SFSCTCAPGYEGKTCAMAK	SFSC(UniMod:4)TC(UniMod:4)APGYEGKTC(UniMod:4)AMAK	3	SFSC(UniMod:4)TC(UniMod:4)APGYEGKTC(UniMod:4)AMAK3	7013	12070.9	12997.1
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	SFSDDQWYSFNDQHVSR	SFSDDQWYSFNDQHVSR	3	SFSDDQWYSFNDQHVSR3	23885.6	15167.6	
Q6NX65	Q6NX65	PDC10_RAT	Pdcd10	Programmed cell death protein 10	1	SFSDTLK	SFSDTLK	1	SFSDTLK1	2704.93	4449.73	4161.42
Q6NX65	Q6NX65	PDC10_RAT	Pdcd10	Programmed cell death protein 10	1	SFSDTLK	SFSDTLK	2	SFSDTLK2	574026	569969	561865
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	SFSEDAVTDSSGSGTLPR	SFSEDAVTDSSGSGTLPR	2	SFSEDAVTDSSGSGTLPR2	243912	289412	246390
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	SFSEDAVTDSSGSGTLPR	SFSEDAVTDSSGSGTLPR	3	SFSEDAVTDSSGSGTLPR3	20226.8	15695.7	22825.4
O54923	O54923	EXOC6_RAT	Exoc6	Exocyst complex component 6	1	SFSIAVQK	SFSIAVQK	2	SFSIAVQK2	21977.7	19863	17778.6
P48199	P48199	CRP_RAT	Crp	C-reactive protein	1	SFSIFSYATK	SFSIFSYATK	2	SFSIFSYATK2	317811	263743	260673
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	SFSLGEIYFK	SFSLGEIYFK	2	SFSLGEIYFK2	17421.5	39693.6	18013.7
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	SFSLPTCR	SFSLPTC(UniMod:4)R	2	SFSLPTC(UniMod:4)R2	13400.3	12640.8	5463.29
A0A8I5ZZG2	A0A8I5ZZG2	A0A8I5ZZG2_RAT	Reep3	Receptor expression-enhancing protein	1	SFSMHDLTAIQGDEPVGHRPYQTLPEAK	SFSMHDLTAIQGDEPVGHRPYQTLPEAK	4	SFSMHDLTAIQGDEPVGHRPYQTLPEAK4	8946.81	12264.5	3707.11
A0A0G2K1L5	A0A0G2K1L5	A0A0G2K1L5_RAT	Reep2	Receptor expression-enhancing protein	1	SFSMQDLTLIR	SFSMQDLTLIR	2	SFSMQDLTLIR2	7019.16	4098.89	
A0A0G2K1L5	A0A0G2K1L5	A0A0G2K1L5_RAT	Reep2	Receptor expression-enhancing protein	1	SFSMQDLTLIRDEDALPLQGPDGR	SFSMQDLTLIRDEDALPLQGPDGR	3	SFSMQDLTLIRDEDALPLQGPDGR3	77717.3	86488.5	72939.6
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	SFSNECLGTIGPVTPLDASDFALDIR	SFSNEC(UniMod:4)LGTIGPVTPLDASDFALDIR	3	SFSNEC(UniMod:4)LGTIGPVTPLDASDFALDIR3	3578.67	6384.14	
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	SFSNVTK	SFSNVTK	2	SFSNVTK2	48276.9	48300.9	40351.6
Q5FWU3	Q5FWU3	ATG9A_RAT	Atg9a	Autophagy-related protein 9A	1	SFSPLQPGQAPQGR	SFSPLQPGQAPQGR	2	SFSPLQPGQAPQGR2	15468.5	16302.1	15916.6
Q5QE80	Q5QE80	AOXC_RAT	Aox3	Aldehyde oxidase 3	1	SFSPNSACCPMNEK	SFSPNSAC(UniMod:4)C(UniMod:4)PMNEK	2	SFSPNSAC(UniMod:4)C(UniMod:4)PMNEK2	2147.94		
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	SFSQAQAFIFIDESHITDAFTWLSHQQK	SFSQAQAFIFIDESHITDAFTWLSHQQK	4	SFSQAQAFIFIDESHITDAFTWLSHQQK4	22571.5	26866.8	24931.4
Q7TP47	Q7TP47	HNRPQ_RAT	Syncrip	Heterogeneous nuclear ribonucleoprotein Q	1	SFSQFGK	SFSQFGK	2	SFSQFGK2	33016.1	31448.6	36158.4
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	SFSQMMLEK	SFSQMMLEK	2	SFSQMMLEK2	41188	47321.2	50903.2
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	SFSQPGLR	SFSQPGLR	2	SFSQPGLR2	15994.7	16207.1	12916.2
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	SFSSQRPGMDR	SFSSQRPGMDR	3	SFSSQRPGMDR3	27509.4	20152.2	13079.5
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	SFSTALYGESDL	SFSTALYGESDL	2	SFSTALYGESDL2	58747.8	47505.3	50581.9
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	SFSTYDKDTDSAITNCALSYK	SFSTYDKDTDSAITNC(UniMod:4)ALSYK	3	SFSTYDKDTDSAITNC(UniMod:4)ALSYK3	15919.7	14704.9	28138.4
A0A8I5ZMC4	A0A8I5ZMC4	A0A8I5ZMC4_RAT	Fgd5	FYVE, RhoGEF and PH domain containing 5	1	SFSVEGR	SFSVEGR	2	SFSVEGR2	86861	59498.3	72095
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	SFSYKPR	SFSYKPR	2	SFSYKPR2	6.20396e+06	3.71438e+06	4.78306e+06
D3ZD83	D3ZD83	D3ZD83_RAT	Mfsd10	Major facilitator superfamily domain containing 10	1	SFTAFLASR	SFTAFLASR	2	SFTAFLASR2	9091.05	4863.19	
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	SFTAVCQK	SFTAVC(UniMod:4)QK	1	SFTAVC(UniMod:4)QK1	28327.3	27618.9	19166.6
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	SFTAVCQK	SFTAVC(UniMod:4)QK	2	SFTAVC(UniMod:4)QK2	1.37941e+06	1.50219e+06	1.48149e+06
A0A0G2JZP9	A0A8I6AJA6;A0A0G2JZP9	A0A0G2JZP9_RAT	Rnf11	Ring finger protein 11-like 1	0	SFTCPSCMEPVDAALLSSYETN	SFTC(UniMod:4)PSC(UniMod:4)MEPVDAALLSSYETN	3	SFTC(UniMod:4)PSC(UniMod:4)MEPVDAALLSSYETN3	3832.73	4260.01	4574.21
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	SFTCSSSAEGR	SFTC(UniMod:4)SSSAEGR	2	SFTC(UniMod:4)SSSAEGR2	33168	44901.9	36061.6
Q64165	Q64165	Q64165_RAT	Gcnt1	Glucosaminyl (N-acetyl) transferase 1	1	SFTGENSLETEK	SFTGENSLETEK	2	SFTGENSLETEK2	16552	21471.2	9515.92
Q3B8N7	Q3B8N7	T22D4_RAT	Tsc22d4	TSC22 domain family protein 4	1	SFTGGLGQLAGPGK	SFTGGLGQLAGPGK	2	SFTGGLGQLAGPGK2	119239	119302	133436
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SFTIDLLEIK	SFTIDLLEIK	2	SFTIDLLEIK2	366718	391317	358838
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	SFTITCLESSK	SFTITC(UniMod:4)LESSK	2	SFTITC(UniMod:4)LESSK2	37254.2	39530.9	47131
M0RAK0	M0RAK0	M0RAK0_RAT	Proser2	Proline and serine rich 2	1	SFTMDDESLK	SFTMDDESLK	2	SFTMDDESLK2	79005.1	99803.6	90210
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	SFTNYSGGYSADHPVIK	SFTNYSGGYSADHPVIK	2	SFTNYSGGYSADHPVIK2	1398.78	3789.24	946.638
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	SFTNYSGGYSADHPVIK	SFTNYSGGYSADHPVIK	3	SFTNYSGGYSADHPVIK3	21451.2	16629.8	18208.4
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	SFTPDHVVYAR	SFTPDHVVYAR	2	SFTPDHVVYAR2	49088.1	31453.7	44265.1
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	SFTPDHVVYAR	SFTPDHVVYAR	3	SFTPDHVVYAR3	449681	467031	518171
Q07803	Q07803	EFGM_RAT	Gfm1	Elongation factor G, mitochondrial	1	SFTPVFLGSALK	SFTPVFLGSALK	2	SFTPVFLGSALK2	3090.13	9372.87	13785
F1LXS3	F1LXS3	F1LXS3_RAT	Matn2	Matrilin 2	1	SFTQVEGAR	SFTQVEGAR	2	SFTQVEGAR2	6978.34	3159.2	4864.11
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	SFTSLYK	SFTSLYK	2	SFTSLYK2	49201.3	48264.8	53922.7
Q6AYQ8	Q6AYQ8	FAHD1_RAT	Fahd1	Acylpyruvase FAHD1, mitochondrial	1	SFTSSCPVSAFVPK	SFTSSC(UniMod:4)PVSAFVPK	2	SFTSSC(UniMod:4)PVSAFVPK2	24364.8	25361.1	15115.7
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	SFTSSYAVSAANHVK	SFTSSYAVSAANHVK	2	SFTSSYAVSAANHVK2	21535.3	24305.3	20079.5
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	SFTSSYAVSAANHVK	SFTSSYAVSAANHVK	3	SFTSSYAVSAANHVK3	76149.7	105402	93984.8
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	SFTSVDVPVIVNGK	SFTSVDVPVIVNGK	2	SFTSVDVPVIVNGK2	48676	42970.9	55714.1
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	SFTYNEFQDVK	SFTYNEFQDVK	2	SFTYNEFQDVK2	132149	121375	124402
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	SFVAHCPELLTEDAVR	SFVAHC(UniMod:4)PELLTEDAVR	3	SFVAHC(UniMod:4)PELLTEDAVR3	14049.2	11666.6	11686.2
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	SFVASNDER	SFVASNDER	2	SFVASNDER2	115238	132193	118026
A0A8I6AJP4	A0A8I6AJP4	A0A8I6AJP4_RAT	Phactr4	Phosphatase and actin regulator 4	1	SFVASTPAPTPAPR	SFVASTPAPTPAPR	2	SFVASTPAPTPAPR2	11081.8	15483.3	12725.7
F7FHP0	F7FHP0	F7FHP0_RAT	Angptl3	Angiopoietin-like 3	1	SFVEQQDNSIR	SFVEQQDNSIR	2	SFVEQQDNSIR2	84323	85606.7	92585.5
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	SFVEYVVYTEDPLVAQLR	SFVEYVVYTEDPLVAQLR	3	SFVEYVVYTEDPLVAQLR3	8230.79	5463.79	9153.06
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	SFVIDGETGIITLSNPR	SFVIDGETGIITLSNPR	2	SFVIDGETGIITLSNPR2	8912.26	12744	14231.2
D4A6X7	D4A6X7	D4A6X7_RAT	Ppcs	Phosphopantothenoylcysteine synthetase	1	SFVIIVTK	SFVIIVTK	2	SFVIIVTK2	3831.89		
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	SFVINIVPEK	SFVINIVPEK	2	SFVINIVPEK2	7827.88	10354.9	
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	SFVKPPSIANLDK	SFVKPPSIANLDK	3	SFVKPPSIANLDK3	22555.5	11196.5	11408.3
P11762	P11762	LEG1_RAT	Lgals1	Galectin-1	1	SFVLNLGK	SFVLNLGK	2	SFVLNLGK2	17064.2	7245.44	15393.3
Q66H94	Q66H94	FKBP9_RAT	Fkbp9	Peptidyl-prolyl cis-trans isomerase FKBP9	1	SFVPDECPR	SFVPDEC(UniMod:4)PR	2	SFVPDEC(UniMod:4)PR2	31389.2	20450.1	28521.3
A0A8I5ZYD8	A0A8I5ZYD8	A0A8I5ZYD8_RAT	Fhl3	Four and a half LIM domains 3	1	SFVPDKGAHYCVPCYENK	SFVPDKGAHYC(UniMod:4)VPC(UniMod:4)YENK	4	SFVPDKGAHYC(UniMod:4)VPC(UniMod:4)YENK4	14167.5	9595.91	10921.6
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	SFVPNMIGGASQADLAVLVISAR	SFVPNMIGGASQADLAVLVISAR	3	SFVPNMIGGASQADLAVLVISAR3	24149.7	25887	28630.1
P35053	P35053	GPC1_RAT	Gpc1	Glypican-1	1	SFVQGLGVASDVVR	SFVQGLGVASDVVR	2	SFVQGLGVASDVVR2	38416	37354.6	31656.3
P35053	P35053	GPC1_RAT	Gpc1	Glypican-1	1	SFVQGLGVASDVVR	SFVQGLGVASDVVR	3	SFVQGLGVASDVVR3	1425.57	2684.33	
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	SFVQWLGCR	SFVQWLGC(UniMod:4)R	2	SFVQWLGC(UniMod:4)R2		11705.2	17728
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	SFVSPPVLSPK	SFVSPPVLSPK	2	SFVSPPVLSPK2	34860.3	40762.2	41858.5
D3ZW15	D3ZW15	D3ZW15_RAT	Sec24b	SEC24 homolog B, COPII coat complex component	1	SFVTWLR	SFVTWLR	2	SFVTWLR2	18113.5	16288.3	17769.5
D3ZED8	D3ZED8	D3ZED8_RAT	Pmel	Premelanosome protein	1	SFVYVWK	SFVYVWK	1	SFVYVWK1	10887.8	7875.41	14922
D3ZED8	D3ZED8	D3ZED8_RAT	Pmel	Premelanosome protein	1	SFVYVWK	SFVYVWK	2	SFVYVWK2	514261	643471	548860
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	SFWEYFGQNSQGK	SFWEYFGQNSQGK	2	SFWEYFGQNSQGK2	256925	238398	362265
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	SFWEYFGQNSQGK	SFWEYFGQNSQGK	3	SFWEYFGQNSQGK3	17449.2	16058.6	22696.1
Q5FVJ0	Q5FVJ0	RUFY3_RAT	Rufy3	Protein RUFY3	1	SFWGPLELVEK	SFWGPLELVEK	2	SFWGPLELVEK2	9959.2	12775.6	9061.63
Q5FVF9	Q5FVF9	BTD_RAT	Btd	Biotinidase	1	SFWYHNMDDPEGHLIIAR	SFWYHNMDDPEGHLIIAR	3	SFWYHNMDDPEGHLIIAR3	21687.1	20282.3	22366.7
Q5FVF9	Q5FVF9	BTD_RAT	Btd	Biotinidase	1	SFWYHNMDDPEGHLIIAR	SFWYHNMDDPEGHLIIAR	4	SFWYHNMDDPEGHLIIAR4	162255	146995	129573
F1MAF8	F1MAF8	F1MAF8_RAT	Atg2b	Autophagy related 2B	1	SFYETETTR	SFYETETTR	2	SFYETETTR2	9310.68		6300.83
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	SFYGTALFLCR	SFYGTALFLC(UniMod:4)R	2	SFYGTALFLC(UniMod:4)R2	9227.86	7073.15	7012.12
Q5M872	Q5M872	DPEP2_RAT	Dpep2	Dipeptidase 2	1	SFYLLGVR	SFYLLGVR	2	SFYLLGVR2	21252.1	19683.3	20245.6
P63018	A0A8I6AQL9;P63018	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	SFYPEEVSSMVLTK	SFYPEEVSSMVLTK	2	SFYPEEVSSMVLTK2	2.10279e+06	2.12018e+06	2.26627e+06
P63018	A0A8I6AQL9;P63018	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	SFYPEEVSSMVLTK	SFYPEEVSSMVLTK	3	SFYPEEVSSMVLTK3	204741	170709	222294
D3ZFF4	D3ZFF4	D3ZFF4_RAT	Lclat1	Lysocardiolipin acyltransferase 1	1	SFYQGEK	SFYQGEK	2	SFYQGEK2	8829.04	15091.8	15020.4
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	SFYTMTPLLGQR	SFYTMTPLLGQR	2	SFYTMTPLLGQR2	38550.3	37038.1	40259.3
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	SGAAAAENACEDDSCVQAPPTEDHPDVAR	SGAAAAENAC(UniMod:4)EDDSC(UniMod:4)VQAPPTEDHPDVAR	4	SGAAAAENAC(UniMod:4)EDDSC(UniMod:4)VQAPPTEDHPDVAR4	26474.2	43728.3	29005.8
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	SGAALENPMLLNK	SGAALENPMLLNK	2	SGAALENPMLLNK2	17612.1	10805.7	23485.3
E9PU15	E9PU15	E9PU15_RAT	Dicer1	Endoribonuclease Dicer	1	SGAETATDLVVLDR	SGAETATDLVVLDR	2	SGAETATDLVVLDR2	1483.38	1478.77	
Q9WTV0	Q9WTV0	PREB_RAT	Preb	Prolactin regulatory element-binding protein	1	SGAEVHPEGVELK	SGAEVHPEGVELK	3	SGAEVHPEGVELK3	37508.8	21208.6	17897.5
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	SGAGEMASEVSHTK	SGAGEMASEVSHTK	2	SGAGEMASEVSHTK2	3678.32	4379.35	3322.28
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	SGAGEMASEVSHTK	SGAGEMASEVSHTK	3	SGAGEMASEVSHTK3	17797.3	17514.1	22211.8
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	SGAGTEDSPCIPWAYYSTVDR	SGAGTEDSPC(UniMod:4)IPWAYYSTVDR	3	SGAGTEDSPC(UniMod:4)IPWAYYSTVDR3	175949	124547	117225
A0A8I6ASM9	A0A8I6ASM9	A0A8I6ASM9_RAT	Smdt1	Essential MCU regulator, mitochondrial	1	SGAILPKPVK	SGAILPKPVK	2	SGAILPKPVK2	23247.5	20327.1	31114.1
D3ZZ81	A0A8I6AK94;Q91Z80;D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	0	SGAIMSALSDTEIQR	SGAIMSALSDTEIQR	2	SGAIMSALSDTEIQR2	32339.6	39261.8	31976.6
D3ZZ81	A0A8I6AK94;Q91Z80;D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	0	SGAIMSALSDTEIQR	SGAIMSALSDTEIQR	3	SGAIMSALSDTEIQR3	5375.36	9940.76	5442.69
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	SGALASPTDPFQSR	SGALASPTDPFQSR	2	SGALASPTDPFQSR2	19783.4	39458.1	23112.8
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	SGALLACGIVNSGVR	SGALLAC(UniMod:4)GIVNSGVR	2	SGALLAC(UniMod:4)GIVNSGVR2	152458	129957	136691
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	SGALLACGIVNSGVR	SGALLAC(UniMod:4)GIVNSGVR	3	SGALLAC(UniMod:4)GIVNSGVR3	7845.03	4820.35	10238.5
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	SGALQIESSEESDQGK	SGALQIESSEESDQGK	2	SGALQIESSEESDQGK2	4067.46	5930.42	4985.95
Q64605	Q64605	PTPRS_RAT	Ptprs	Receptor-type tyrosine-protein phosphatase S	1	SGALQIESSEETDQGK	SGALQIESSEETDQGK	2	SGALQIESSEETDQGK2	3910.77	1653.18	
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	SGANVLICGPNGCGK	SGANVLIC(UniMod:4)GPNGC(UniMod:4)GK	2	SGANVLIC(UniMod:4)GPNGC(UniMod:4)GK2	8365.31	9863.36	5209.54
Q4KLN3	Q4KLN3	Q4KLN3_RAT	Srpk1	SRSF protein kinase 1	1	SGAPPPSGSAVSTAPQPK	SGAPPPSGSAVSTAPQPK	2	SGAPPPSGSAVSTAPQPK2	20244.2		
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	SGAPSEPLLPHQPSLETK	SGAPSEPLLPHQPSLETK	2	SGAPSEPLLPHQPSLETK2	3739.76	10910.8	7214.03
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	SGAPSEPLLPHQPSLETK	SGAPSEPLLPHQPSLETK	3	SGAPSEPLLPHQPSLETK3	109790	125195	93915.9
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	SGAQASSTPLSPTR	SGAQASSTPLSPTR	2	SGAQASSTPLSPTR2	29055.9	30376.8	28169.1
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	SGAQATWAELSWPHEK	SGAQATWAELSWPHEK	2	SGAQATWAELSWPHEK2	297692	306518	293515
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	SGAQATWAELSWPHEK	SGAQATWAELSWPHEK	3	SGAQATWAELSWPHEK3	2.05953e+06	2.00149e+06	1.96197e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	SGASGPENFQVGSMPPAQQQVTSGQMHR	SGASGPENFQVGSMPPAQQQVTSGQMHR	3	SGASGPENFQVGSMPPAQQQVTSGQMHR3	719283	783851	809911
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	SGASGPENFQVGSMPPAQQQVTSGQMHR	SGASGPENFQVGSMPPAQQQVTSGQMHR	4	SGASGPENFQVGSMPPAQQQVTSGQMHR4	201848	185098	183644
A0A8I5ZMT8	A0A8I5ZMT8	A0A8I5ZMT8_RAT	ENSRNOG00000063035	Ig-like domain-containing protein	1	SGASPKPWIYETSK	SGASPKPWIYETSK	2	SGASPKPWIYETSK2	3659.22		
A0A8I5ZMT8	A0A8I5ZMT8	A0A8I5ZMT8_RAT	ENSRNOG00000063035	Ig-like domain-containing protein	1	SGASPKPWIYETSK	SGASPKPWIYETSK	3	SGASPKPWIYETSK3	34126.1	37480.7	31850
Q3B8R7	Q3B8R7	Q3B8R7_RAT	Mrpl47	Mitochondrial ribosomal protein L47	1	SGASWTCQQLR	SGASWTC(UniMod:4)QQLR	2	SGASWTC(UniMod:4)QQLR2	6003.24	8313.68	5239.8
D4A0G9	D4A0G9	D4A0G9_RAT	Ercc6l	ERCC excision repair 6 like, spindle assembly checkpoint helicase	1	SGATLASGNK	SGATLASGNK	2	SGATLASGNK2	10806.6		13154.4
Q9ES58	Q9ES58	MO2R1_RAT	Cd200r1	Cell surface glycoprotein CD200 receptor 1	1	SGATPDIEEDEMQPYASYTEK	SGATPDIEEDEMQPYASYTEK	3	SGATPDIEEDEMQPYASYTEK3	28436.6	27085.5	32377
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	SGAVGDQETGDSFEDEER	SGAVGDQETGDSFEDEER	2	SGAVGDQETGDSFEDEER2	511.9	1126.86	6413.65
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	SGAVGDQETGDSFEDEERQDLATR	SGAVGDQETGDSFEDEERQDLATR	3	SGAVGDQETGDSFEDEERQDLATR3	34625.9	52994.5	33284.9
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	SGAVQSAGLLGPGSPAR	SGAVQSAGLLGPGSPAR	2	SGAVQSAGLLGPGSPAR2	229427	231475	227527
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	SGAVQSAGLLGPGSPAR	SGAVQSAGLLGPGSPAR	3	SGAVQSAGLLGPGSPAR3	25927.1	34274.9	24857.7
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	SGAWDESGVFIYTTSNHIK	SGAWDESGVFIYTTSNHIK	3	SGAWDESGVFIYTTSNHIK3	48404.6	81192.6	60244.1
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	SGAYLFLPDGQGQPYVSLR	SGAYLFLPDGQGQPYVSLR	3	SGAYLFLPDGQGQPYVSLR3	8717.03	10732.1	
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	SGAYLFLPDNEAK	SGAYLFLPDNEAK	2	SGAYLFLPDNEAK2	2820.39		2401.69
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	SGAYLFLPDNEAKPYVPK	SGAYLFLPDNEAKPYVPK	3	SGAYLFLPDNEAKPYVPK3	32284.5	25933.4	28294.6
D3ZD73	D3ZD73;A0A8I6A3H5	D3ZD73_RAT	Ddx6	DEAD-box helicase 6	0	SGAYLIPLLER	SGAYLIPLLER	2	SGAYLIPLLER2	13103.9	13155.8	14278.9
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	SGCDVNSPR	SGC(UniMod:4)DVNSPR	2	SGC(UniMod:4)DVNSPR2	7582.17		9371.7
Q9ES54	Q9ES54	NPL4_RAT	Nploc4	Nuclear protein localization protein 4 homolog	1	SGCEGHLPWPNGICTK	SGC(UniMod:4)EGHLPWPNGIC(UniMod:4)TK	3	SGC(UniMod:4)EGHLPWPNGIC(UniMod:4)TK3	7897.05	7746.96	
Q6AYJ8	Q6AYJ8	TP8L2_RAT	Tnfaip8l2	Tumor necrosis factor alpha-induced protein 8-like protein 2	1	SGCFSPGELALATR	SGC(UniMod:4)FSPGELALATR	2	SGC(UniMod:4)FSPGELALATR2	15235.4	9111.48	9028.97
F1LWZ3	F1LWZ3	F1LWZ3_RAT	Rhbdf2	Inactive rhomboid protein	1	SGCIQTLK	SGC(UniMod:4)IQTLK	2	SGC(UniMod:4)IQTLK2	3480.43	4049.71	6237.19
Q8CIZ5	F1LVL9;Q8CIZ5	DMBT1_RAT	Dmbt1	Deleted in malignant brain tumors 1 protein	0	SGCIRDETYQSYSSPSPR	SGC(UniMod:4)IRDETYQSYSSPSPR	3	SGC(UniMod:4)IRDETYQSYSSPSPR3	1.58143e+06	1.99421e+06	1.91755e+06
Q8CIZ5	F1LVL9;Q8CIZ5	DMBT1_RAT	Dmbt1	Deleted in malignant brain tumors 1 protein	0	SGCIRDETYQSYSSPSPR	SGC(UniMod:4)IRDETYQSYSSPSPR	4	SGC(UniMod:4)IRDETYQSYSSPSPR4	4868.84	8300.08	7633.8
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	SGCKEEDSR	SGC(UniMod:4)KEEDSR	2	SGC(UniMod:4)KEEDSR2	449248	323087	403333
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	SGCKEEDSRLDNNGCSTQEVNITEFQLK	SGC(UniMod:4)KEEDSRLDNNGC(UniMod:4)STQEVNITEFQLK	4	SGC(UniMod:4)KEEDSRLDNNGC(UniMod:4)STQEVNITEFQLK4	10481.8	12078.1	12515.5
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	SGCPTVGDR	SGC(UniMod:4)PTVGDR	2	SGC(UniMod:4)PTVGDR2	57287.2	83104	
B0BNE5	B0BNE5	ESTD_RAT	Esd	S-formylglutathione hydrolase	1	SGCQQAASEHGLVVIAPDTSPR	SGC(UniMod:4)QQAASEHGLVVIAPDTSPR	3	SGC(UniMod:4)QQAASEHGLVVIAPDTSPR3	12702.2	15442.1	14157.5
Q6P7Q1	Q6P7Q1	BABA2_RAT	Babam2	BRISC and BRCA1-A complex member 2	1	SGCTSLTPGPNCDR	SGC(UniMod:4)TSLTPGPNC(UniMod:4)DR	2	SGC(UniMod:4)TSLTPGPNC(UniMod:4)DR2	145144	96928.3	107940
P62630	P62630;F1M6C2;M0R757;A0A8I6AQI9	EF1A1_RAT	Eef1a1	Elongation factor 1-alpha 1	0	SGDAAIVDMVPGK	SGDAAIVDMVPGK	2	SGDAAIVDMVPGK2	11753.3	7683.9	6257.42
D4ABT8	D4ABT8	D4ABT8_RAT	Hnrnpul2	Heterogeneous nuclear ribonucleoprotein U-like 2	1	SGDETPGSEAPGDK	SGDETPGSEAPGDK	2	SGDETPGSEAPGDK2	6734.32	7161.67	7872.97
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	SGDFQMSPYAEYPK	SGDFQMSPYAEYPK	2	SGDFQMSPYAEYPK2	4867.59	11119.4	6145.92
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	SGDGESTPVEHVR	SGDGESTPVEHVR	2	SGDGESTPVEHVR2	54899.1	49941	35625.6
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	SGDGESTPVEHVR	SGDGESTPVEHVR	3	SGDGESTPVEHVR3	29194	33014.9	395283
Q5XIM5	Q5XIM5	CDV3_RAT	Cdv3	Protein CDV3 homolog	1	SGDGGSLGSGAR	SGDGGSLGSGAR	2	SGDGGSLGSGAR2	9169.51	17162.6	21061.6
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	SGDHLALEDYLTTDLVEMWLQDMK	SGDHLALEDYLTTDLVEMWLQDMK	3	SGDHLALEDYLTTDLVEMWLQDMK3		33363.8	78045.9
B2GV97	B2GV97	B2GV97_RAT	Sepsecs	O-phosphoseryl-tRNA(Sec) selenium transferase	1	SGDISAVQPK	SGDISAVQPK	2	SGDISAVQPK2	17801.7	20104	13026.5
D3Z8I2	D3Z8I2	D3Z8I2_RAT	Susd3	Sushi domain containing 3	1	SGDKDPWTFK	SGDKDPWTFK	3	SGDKDPWTFK3	3156.18	3904.25	
E9PU02	E9PU02	E9PU02_RAT	Trappc9	Trafficking protein particle complex subunit 9	1	SGDKIPLLCVPFEK	SGDKIPLLC(UniMod:4)VPFEK	3	SGDKIPLLC(UniMod:4)VPFEK3	13961.3	15933.3	15471.8
P35738	P35738	ODBB_RAT	Bckdhb	2-oxoisovalerate dehydrogenase subunit beta, mitochondrial	1	SGDLFNCGSLTIR	SGDLFNC(UniMod:4)GSLTIR	2	SGDLFNC(UniMod:4)GSLTIR2	3578.3	4636.06	7649.27
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	SGDLGDMEPLK	SGDLGDMEPLK	2	SGDLGDMEPLK2	65776.5	60878.8	60660.3
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	SGDLLMR	SGDLLMR	2	SGDLLMR2	68736.4	54348.8	77554.9
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	SGDLSMNLLR	SGDLSMNLLR	2	SGDLSMNLLR2	147668	150061	135409
P28042	P28042	SSBP_RAT	Ssbp1	Single-stranded DNA-binding protein, mitochondrial	1	SGDNEAYQMGDVSQK	SGDNEAYQMGDVSQK	2	SGDNEAYQMGDVSQK2	11267.4	15797	17152.2
Q6AYT7	Q6AYT7	ABD12_RAT	Abhd12	Lysophosphatidylserine lipase ABHD12	1	SGDNPVYIWGHSLGTGVATNLVR	SGDNPVYIWGHSLGTGVATNLVR	3	SGDNPVYIWGHSLGTGVATNLVR3	8935.12	16720.1	22408.9
A0A8I6A4X3	A0A8I6A4X3	A0A8I6A4X3_RAT	Selplg	Selectin P ligand	1	SGDPDGDDLTLHSFLP	SGDPDGDDLTLHSFLP	2	SGDPDGDDLTLHSFLP2	14709.9	17251.8	15232.5
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	SGDPMILSCLMEHLYTEK	SGDPMILSC(UniMod:4)LMEHLYTEK	3	SGDPMILSC(UniMod:4)LMEHLYTEK3	17817.2	15146.4	17259.4
P54777	P54777	PEX6_RAT	Pex6	Peroxisomal ATPase PEX6	1	SGDSGGVMDR	SGDSGGVMDR	2	SGDSGGVMDR2	2208.27	4844.97	5372.97
Q5XIP9	Q5XIP9	TMM43_RAT	Tmem43	Transmembrane protein 43	1	SGDTLLLLHHGDFSAEEVFR	SGDTLLLLHHGDFSAEEVFR	3	SGDTLLLLHHGDFSAEEVFR3	12400.2		1596.43
Q5XIP9	Q5XIP9	TMM43_RAT	Tmem43	Transmembrane protein 43	1	SGDTLLLLHHGDFSAEEVFR	SGDTLLLLHHGDFSAEEVFR	4	SGDTLLLLHHGDFSAEEVFR4	9944.26	11644.8	12327
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	SGDTVVTK	SGDTVVTK	2	SGDTVVTK2	17833.3	53563.1	49262.8
Q6AYA5	Q6AYA5	T106B_RAT	Tmem106b	Transmembrane protein 106B	1	SGDVSQFPYVEFTGR	SGDVSQFPYVEFTGR	2	SGDVSQFPYVEFTGR2	19065.3	12126.3	15590.7
Q6MG21	Q6MG21	SYVM_RAT	Vars2	Valine--tRNA ligase, mitochondrial	1	SGDVVEYLLK	SGDVVEYLLK	2	SGDVVEYLLK2	8724.35	2093.1	4452.3
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	SGDWMIDYVSGR	SGDWMIDYVSGR	2	SGDWMIDYVSGR2	11919.2	9611.5	10076.1
Q9QZA6	Q9QZA6	CD151_RAT	Cd151	CD151 antigen	1	SGEADSRVVPDSCCK	SGEADSRVVPDSC(UniMod:4)C(UniMod:4)K	3	SGEADSRVVPDSC(UniMod:4)C(UniMod:4)K3	5163.84	1192.04	2015.74
O88923	O88923	AGRL2_RAT	Adgrl2	Adhesion G protein-coupled receptor L2	1	SGEAIINYANYHDTSPYR	SGEAIINYANYHDTSPYR	3	SGEAIINYANYHDTSPYR3	6568.6	2381.88	10720.1
P98166	P98166	VLDLR_RAT	Vldlr	Very low-density lipoprotein receptor	1	SGECIDITK	SGEC(UniMod:4)IDITK	2	SGEC(UniMod:4)IDITK2	4713.9	8249.03	5441.8
A0A8I5ZTA7	A0A8I5ZTA7	A0A8I5ZTA7_RAT	Lrp8	LDL receptor related protein 8	1	SGECIHLGWR	SGEC(UniMod:4)IHLGWR	3	SGEC(UniMod:4)IHLGWR3	6411.8	7403.25	2919.9
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	SGECPAAIVGGINLLLKPNTSVQFMK	SGEC(UniMod:4)PAAIVGGINLLLKPNTSVQFMK	3	SGEC(UniMod:4)PAAIVGGINLLLKPNTSVQFMK3	16565.5	12881	16192.6
P61954	P61954	GBG11_RAT	Gng11	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11	1	SGEDPLVK	SGEDPLVK	2	SGEDPLVK2	472520	526581	464888
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	SGEEEAVGSK	SGEEEAVGSK	2	SGEEEAVGSK2			18406.4
Q9JLD2	Q9JLD2	NEUS_RAT	Serpini1	Neuroserpin	1	SGEEFSFLR	SGEEFSFLR	2	SGEEFSFLR2		5794.37	
P35815	P35815	PPM1B_RAT	Ppm1b	Protein phosphatase 1B	1	SGEEGMPDLAHVMR	SGEEGMPDLAHVMR	2	SGEEGMPDLAHVMR2	18642.5	10233	7060.78
P35815	P35815	PPM1B_RAT	Ppm1b	Protein phosphatase 1B	1	SGEEGMPDLAHVMR	SGEEGMPDLAHVMR	3	SGEEGMPDLAHVMR3	69016.5	65808.1	70922.5
A0A8I5ZKS4	A0A8I5ZKS4	A0A8I5ZKS4_RAT	Hycc1	Family with sequence similarity 126, member A	1	SGEEQLLR	SGEEQLLR	2	SGEEQLLR2	5580.92	8674.69	5045.61
P97881	P97881	MUC13_RAT	Muc13	Mucin-13	1	SGEEQNLIEDDFHNLR	SGEEQNLIEDDFHNLR	3	SGEEQNLIEDDFHNLR3	5975.44	5038.5	2443.48
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	SGEFSCGGR	SGEFSC(UniMod:4)GGR	2	SGEFSC(UniMod:4)GGR2	185448	196083	169693
P52873	P52873	PYC_RAT	Pc	Pyruvate carboxylase, mitochondrial	1	SGEGMGIR	SGEGMGIR	2	SGEGMGIR2	11261.9	10216.6	14863.8
Q5M808	Q5M808	HIKES_RAT	Hikeshi	Protein Hikeshi	1	SGEGSQHPFGAMNIVR	SGEGSQHPFGAMNIVR	3	SGEGSQHPFGAMNIVR3	4416.9	1221.86	3523.14
P38652	P38652	PGM1_RAT	Pgm1	Phosphoglucomutase-1	1	SGEHDFGAAFDGDGDR	SGEHDFGAAFDGDGDR	3	SGEHDFGAAFDGDGDR3	5770.02	2578.72	4515.76
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	SGEISIDDIR	SGEISIDDIR	2	SGEISIDDIR2	329187	347676	312658
P58365	P58365	CAD23_RAT	Cdh23	Cadherin-23	1	SGEITTTSLLDR	SGEITTTSLLDR	2	SGEITTTSLLDR2	2829.46	4717.38	3969.95
Q9R1R4	Q9R1R4	TDRD7_RAT	Tdrd7	Tudor domain-containing protein 7	1	SGEIVCYAVACTETAR	SGEIVC(UniMod:4)YAVAC(UniMod:4)TETAR	2	SGEIVC(UniMod:4)YAVAC(UniMod:4)TETAR2			3744.87
Q2YDU8	Q2YDU8	SPNS1_RAT	Spns1	Protein spinster homolog 1	1	SGELEVPDCEGLQR	SGELEVPDC(UniMod:4)EGLQR	2	SGELEVPDC(UniMod:4)EGLQR2	29821	31561.3	21929.7
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	SGELMIK	SGELMIK	2	SGELMIK2	227828	239314	194588
Q99N02	Q99N02	SO3A1_RAT	Slco3a1	Solute carrier organic anion transporter family member 3A1	1	SGELQGDEAQR	SGELQGDEAQR	2	SGELQGDEAQR2		39822	
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	SGELQGGPDDNLIEGGGTK	SGELQGGPDDNLIEGGGTK	2	SGELQGGPDDNLIEGGGTK2	4303.88	13722	20144.9
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	SGELQGGPDDNLIEGGGTK	SGELQGGPDDNLIEGGGTK	3	SGELQGGPDDNLIEGGGTK3	14623.6	13182.8	10420.5
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	SGEMDPGR	SGEMDPGR	2	SGEMDPGR2	47985	43319.1	47310
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	SGEQVPLLLK	SGEQVPLLLK	2	SGEQVPLLLK2	12701.3	9197.71	15772
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	SGEQVTFR	SGEQVTFR	2	SGEQVTFR2	225749	232609	199892
D3Z8Q7	D3Z8Q7	D3Z8Q7_RAT	Ciao2b	Cytosolic iron-sulfur assembly component 2B	1	SGERPVTAGEEDEEVPDSIDAR	SGERPVTAGEEDEEVPDSIDAR	3	SGERPVTAGEEDEEVPDSIDAR3	38291.5	35630.5	24311.7
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	SGESLPADCPVR	SGESLPADC(UniMod:4)PVR	2	SGESLPADC(UniMod:4)PVR2	11138.6	10862	
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	SGESSSQLSQEQK	SGESSSQLSQEQK	2	SGESSSQLSQEQK2	5233.92		7970.22
P04764	M0R5J4;P15429;A0A8I6ASH7;P04764;P07323;A0A8I5YC61	ENOA_RAT	Eno1	Alpha-enolase	0	SGETEDTFIADLVVGLCTGQIK	SGETEDTFIADLVVGLC(UniMod:4)TGQIK	3	SGETEDTFIADLVVGLC(UniMod:4)TGQIK3	13003.7	11183.7	5352.33
Q499N5	Q499N5	ACSF2_RAT	Acsf2	Medium-chain acyl-CoA ligase ACSF2, mitochondrial	1	SGETTTEEEIK	SGETTTEEEIK	2	SGETTTEEEIK2	5882.33	5878.37	6660.52
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	SGETTYSCR	SGETTYSC(UniMod:4)R	2	SGETTYSC(UniMod:4)R2	20076.4		30581.8
O88917	O88917	AGRL1_RAT	Adgrl1	Adhesion G protein-coupled receptor L1	1	SGETVINTANYHDTSPYR	SGETVINTANYHDTSPYR	3	SGETVINTANYHDTSPYR3	3251.05	8419.2	8451.15
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	SGETWDSK	SGETWDSK	2	SGETWDSK2	17303.5	13442.5	14138.6
A0A8I6GM04	A0A0G2K988;A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	0	SGEVFDK	SGEVFDK	2	SGEVFDK2	9257.25	13446.1	14505.1
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	SGEVFDKDLSK	SGEVFDKDLSK	2	SGEVFDKDLSK2	27286	20893.7	20772.6
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	SGEVFDKDLSK	SGEVFDKDLSK	3	SGEVFDKDLSK3	179624	169250	178118
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	SGEVLVNVK	SGEVLVNVK	2	SGEVLVNVK2	222255	202938	192067
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	SGEVMQHAWVEGNSSVK	SGEVMQHAWVEGNSSVK	2	SGEVMQHAWVEGNSSVK2	1751.33		1823.78
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	SGEVMQHAWVEGNSSVK	SGEVMQHAWVEGNSSVK	3	SGEVMQHAWVEGNSSVK3	17811.3	11183.2	15576.9
Q792I0	Q792I0	LIN7C_RAT	Lin7c	Protein lin-7 homolog C	1	SGEVPPQK	SGEVPPQK	2	SGEVPPQK2			23869.8
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	SGEVQNLAVK	SGEVQNLAVK	2	SGEVQNLAVK2	59390	61854.2	61692.8
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	SGEYPFPLIK	SGEYPFPLIK	2	SGEYPFPLIK2	142436	158440	217390
P26453	P26453	BASI_RAT	Bsg	Basigin	1	SGEYSCIFLPEPVGR	SGEYSC(UniMod:4)IFLPEPVGR	2	SGEYSC(UniMod:4)IFLPEPVGR2	172700	216468	114334
P13941	P13941	CO3A1_RAT	Col3a1	Collagen alpha-1(III) chain	1	SGEYWVDPNQGCK	SGEYWVDPNQGC(UniMod:4)K	2	SGEYWVDPNQGC(UniMod:4)K2	5638.3	8048.73	12177.1
P35815	P35815	PPM1B_RAT	Ppm1b	Protein phosphatase 1B	1	SGFALEPSVENVK	SGFALEPSVENVK	2	SGFALEPSVENVK2	115781	87746.8	124018
P97531	P97531	CIP4_RAT	Trip10	Cdc42-interacting protein 4	1	SGFARPGDLEFEDFSQVMNR	SGFARPGDLEFEDFSQVMNR	3	SGFARPGDLEFEDFSQVMNR3	4853.05	5738.51	
D3ZQJ3	D3ZQJ3	D3ZQJ3_RAT	Gigyf1	GRB10 interacting GYF protein 1	1	SGFEEGGAGPR	SGFEEGGAGPR	2	SGFEEGGAGPR2	6772.25	10815.2	2356.94
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	SGFEPPGDFPFEDYSQHIYR	SGFEPPGDFPFEDYSQHIYR	3	SGFEPPGDFPFEDYSQHIYR3	533874	557588	472542
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	SGFEPPGDIEFEDYTQPMKR	SGFEPPGDIEFEDYTQPMKR	3	SGFEPPGDIEFEDYTQPMKR3	14486.7	14526.1	11533.7
B2GUZ7	B2GUZ7	B2GUZ7_RAT	Tbcc	Tubulin folding cofactor C	1	SGFFAAAFAR	SGFFAAAFAR	2	SGFFAAAFAR2	19542.2	12113.2	15099.9
A0A8I6GIQ1	A0A8I6GIQ1	A0A8I6GIQ1_RAT	Tmem50a	Transmembrane protein 50A	1	SGFLEGSR	SGFLEGSR	2	SGFLEGSR2	15187.3	14845.4	8865.08
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	SGFLSSPEYPQPYPK	SGFLSSPEYPQPYPK	2	SGFLSSPEYPQPYPK2	954759	984779	962311
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	SGFLSSPEYPQPYPK	SGFLSSPEYPQPYPK	3	SGFLSSPEYPQPYPK3	50451.6	56981.2	63476.9
D3ZYT2	D3ZYT2	D3ZYT2_RAT	Mrps5	Mitochondrial ribosomal protein S5	1	SGFLWPGLNVPLIK	SGFLWPGLNVPLIK	2	SGFLWPGLNVPLIK2	5628.34	5599.01	6018.11
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	SGFNPNQGFFK	SGFNPNQGFFK	2	SGFNPNQGFFK2	82280.1	85480.7	72557.5
Q5XI07	Q5XI07	LPP_RAT	Lpp	Lipoma-preferred partner homolog	1	SGFPAPMGPPSVPPSFRPEDELEHLTK	SGFPAPMGPPSVPPSFRPEDELEHLTK	4	SGFPAPMGPPSVPPSFRPEDELEHLTK4	25916.8	26196.9	28913.1
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	SGFPLLK	SGFPLLK	2	SGFPLLK2	13936.4	21077.4	17705.3
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	SGFSCINTVGSYTCQR	SGFSC(UniMod:4)INTVGSYTC(UniMod:4)QR	2	SGFSC(UniMod:4)INTVGSYTC(UniMod:4)QR2	31784.9	33915.8	19994.2
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	SGFSCINTVGSYTCQR	SGFSC(UniMod:4)INTVGSYTC(UniMod:4)QR	3	SGFSC(UniMod:4)INTVGSYTC(UniMod:4)QR3	46071.7	54940.5	58049.7
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	SGFSLGSDGK	SGFSLGSDGK	1	SGFSLGSDGK1	2317.22	2431.77	1132.05
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	SGFSLGSDGK	SGFSLGSDGK	2	SGFSLGSDGK2	280336	349065	335270
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	SGFVLHDNK	SGFVLHDNK	2	SGFVLHDNK2	14520.4	12681.1	9240.83
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	SGFWGWR	SGFWGWR	2	SGFWGWR2	43186.7	47963.3	45510.7
B2RZ66	B2RZ66	B2RZ66_RAT	Srp19	Signal recognition particle 19 kDa protein	1	SGGADPSLQQGEGSK	SGGADPSLQQGEGSK	2	SGGADPSLQQGEGSK2	7309.57	7859.42	11720.3
P22062	P22062	PIMT_RAT	Pcmt1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase	1	SGGASHSELIHNLR	SGGASHSELIHNLR	2	SGGASHSELIHNLR2	4285.46	3469.96	
P22062	P22062	PIMT_RAT	Pcmt1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase	1	SGGASHSELIHNLR	SGGASHSELIHNLR	3	SGGASHSELIHNLR3	52062.3	42438.2	47258.6
Q5PPI8	Q5PPI8	Q5PPI8_RAT	Rmc1	Regulator of MON1-CCZ1	1	SGGATGVVVK	SGGATGVVVK	2	SGGATGVVVK2	19696.5	23156.5	20506.9
A0A8I6AUQ7	A0A8I6AUQ7	A0A8I6AUQ7_RAT	Zpr1	ZPR1 zinc finger	1	SGGAVEPLGTR	SGGAVEPLGTR	2	SGGAVEPLGTR2	15235.4	12923	13558.5
Q04400	Q04400	ADCY5_RAT	Adcy5	Adenylate cyclase type 5	1	SGGAVTPQQQQR	SGGAVTPQQQQR	2	SGGAVTPQQQQR2			8543.58
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	SGGCINHK	SGGC(UniMod:4)INHK	2	SGGC(UniMod:4)INHK2			2952.31
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	SGGDCTFIHQFIECQK	SGGDC(UniMod:4)TFIHQFIEC(UniMod:4)QK	3	SGGDC(UniMod:4)TFIHQFIEC(UniMod:4)QK3	2102.44	3349.83	
Q3T1I4	Q3T1I4	PRRC1_RAT	Prrc1	Protein PRRC1	1	SGGELDIVVTSNK	SGGELDIVVTSNK	2	SGGELDIVVTSNK2	12789.8	15473.8	11341.2
D3ZUP8	D3ZUP8	D3ZUP8_RAT	Lmbrd2	LMBR1 domain containing 2	1	SGGFSITGK	SGGFSITGK	2	SGGFSITGK2	6036.95	3627.46	3024.39
D3ZD11	D3ZD11	D3ZD11_RAT	Spcs2	Signal peptidase complex subunit 2	1	SGGGGGSSGPGGGPSCGTSSSR	SGGGGGSSGPGGGPSC(UniMod:4)GTSSSR	2	SGGGGGSSGPGGGPSC(UniMod:4)GTSSSR2			29138.3
D3ZKN1	D3ZKN1	D3ZKN1_RAT	Bpifa6	BPI fold containing family A, member 6	1	SGGGGPGLNTGLLSGNK	SGGGGPGLNTGLLSGNK	2	SGGGGPGLNTGLLSGNK2	51762.5	29835.1	44403.9
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	SGGGPLEGMR	SGGGPLEGMR	2	SGGGPLEGMR2	11774.1	15457.7	12834.7
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	SGGGPLLSWQR	SGGGPLLSWQR	2	SGGGPLLSWQR2	15543.7	16612.7	19779.8
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	SGGGVGDVLR	SGGGVGDVLR	2	SGGGVGDVLR2	20396.5	19093.5	25233
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	SGGGYIVVDPILR	SGGGYIVVDPILR	2	SGGGYIVVDPILR2	21212.8	12523.6	14390.3
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	SGGHHGGDWSWR	SGGHHGGDWSWR	3	SGGHHGGDWSWR3	18532.9	8622.06	20315
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	SGGIERPFVLSR	SGGIERPFVLSR	2	SGGIERPFVLSR2	11858.8	9639.31	4448.9
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	SGGIERPFVLSR	SGGIERPFVLSR	3	SGGIERPFVLSR3	1.79116e+06	1.8505e+06	1.85732e+06
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	SGGIPALVR	SGGIPALVR	2	SGGIPALVR2	66102.9	52029.8	52363.5
D4AEK9	D4AEK9	D4AEK9_RAT	Ccdc6	Coiled-coil domain containing 6	1	SGGIVISPFR	SGGIVISPFR	2	SGGIVISPFR2	105507	97676.9	98344.7
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	SGGLHCSSNAIR	SGGLHC(UniMod:4)SSNAIR	2	SGGLHC(UniMod:4)SSNAIR2	2620.81	2094.8	2499.05
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	SGGLHCSSNAIR	SGGLHC(UniMod:4)SSNAIR	3	SGGLHC(UniMod:4)SSNAIR3	34209.2	27036.6	37720.7
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	SGGLPLVLSMLTR	SGGLPLVLSMLTR	2	SGGLPLVLSMLTR2	74739.5	73204.1	78470.5
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	SGGLPLVLSMLTR	SGGLPLVLSMLTR	3	SGGLPLVLSMLTR3	4517.71	3522.98	6011.52
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	SGGLSVEVCGPALSQQWK	SGGLSVEVC(UniMod:4)GPALSQQWK	2	SGGLSVEVC(UniMod:4)GPALSQQWK2	51553.7	50533.5	36221.2
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	SGGLSVEVCGPALSQQWK	SGGLSVEVC(UniMod:4)GPALSQQWK	3	SGGLSVEVC(UniMod:4)GPALSQQWK3	5854.23	16975	5546.56
Q8R3Z7	Q8R3Z7	Q8R3Z7_RAT	Ehd4	EH-domain containing 4	1	SGGMDAVQTVTGGLR	SGGMDAVQTVTGGLR	2	SGGMDAVQTVTGGLR2	77288.4	76515.4	72241.1
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	SGGMGSASEMLAALAVESAGVK	SGGMGSASEMLAALAVESAGVK	3	SGGMGSASEMLAALAVESAGVK3	11699.3	7631.08	8304.15
E9PU10	E9PU10	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	1	SGGMLSPETLSAIHYALQEGR	SGGMLSPETLSAIHYALQEGR	3	SGGMLSPETLSAIHYALQEGR3	94304.1	86115.7	93167
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	SGGMSNELNNIISR	SGGMSNELNNIISR	2	SGGMSNELNNIISR2	14272.7	18551.9	16207.6
F7EUU4	F7EUU4	F7EUU4_RAT	Cops5	COP9 signalosome subunit 5	1	SGGNLEVMGLMLGK	SGGNLEVMGLMLGK	2	SGGNLEVMGLMLGK2	62309.3	58365.9	58752.9
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	SGGPTAVVPDPR	SGGPTAVVPDPR	2	SGGPTAVVPDPR2	77382	83035.3	85873.7
A0A8I6ALT5	A0A8I6ALT5	A0A8I6ALT5_RAT	Dok2	Docking protein 2	1	SGGSEGEYAVPFDTVVHSLK	SGGSEGEYAVPFDTVVHSLK	3	SGGSEGEYAVPFDTVVHSLK3		1384.18	
A0A8I6ALT5	A0A8I6ALT5	A0A8I6ALT5_RAT	Dok2	Docking protein 2	1	SGGSEGEYAVPFDTVVHSLKK	SGGSEGEYAVPFDTVVHSLKK	4	SGGSEGEYAVPFDTVVHSLKK4	16766.5	18485.8	20448.5
A0A8I5ZQG6	A0A8I5ZQG6	A0A8I5ZQG6_RAT	Sez6l2	Seizure related 6 homolog like 2	1	SGGSPLSPVIYDSDMDDVPER	SGGSPLSPVIYDSDMDDVPER	3	SGGSPLSPVIYDSDMDDVPER3	4498.02		1674.01
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	SGGSSQVFFMTLNR	SGGSSQVFFMTLNR	2	SGGSSQVFFMTLNR2	56501.4	48713.9	70729.3
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	SGGSSQVFFMTLNR	SGGSSQVFFMTLNR	3	SGGSSQVFFMTLNR3	9782.35	9146.31	8469.44
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	SGGSSQVYFMTLGR	SGGSSQVYFMTLGR	2	SGGSSQVYFMTLGR2	23780.7	19398.3	26423.8
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	SGGTALHVAAAK	SGGTALHVAAAK	2	SGGTALHVAAAK2	44188.9	35316.1	32636
B2RYI2	B2RYI2	B2RYI2_RAT	Srp68	Signal recognition particle subunit SRP68	1	SGGTEGLLAEK	SGGTEGLLAEK	2	SGGTEGLLAEK2	5897.23	5243.98	3886.27
Q7TP21	Q7TP21	Q7TP21_RAT	Rpa1	Replication protein A subunit	1	SGGTGGSNTNWK	SGGTGGSNTNWK	2	SGGTGGSNTNWK2	3451.76	4579.37	3355.27
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	SGGTSDSFVK	SGGTSDSFVK	2	SGGTSDSFVK2	583508	648529	631878
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	SGGYSSGK	SGGYSSGK	1	SGGYSSGK1	1152.48		
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	SGGYTVLQVVEALGSSLENPEPR	SGGYTVLQVVEALGSSLENPEPR	3	SGGYTVLQVVEALGSSLENPEPR3	1526.07		
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	SGHCIPLR	SGHC(UniMod:4)IPLR	2	SGHC(UniMod:4)IPLR2	47276.3	38069.2	27657.6
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	SGHELGMTPLQELSLR	SGHELGMTPLQELSLR	2	SGHELGMTPLQELSLR2	564.658	3064.3	1414.06
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	SGHELGMTPLQELSLR	SGHELGMTPLQELSLR	3	SGHELGMTPLQELSLR3	29640.7	29083.9	35182.7
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	SGHELGMTPLQELSLRK	SGHELGMTPLQELSLRK	4	SGHELGMTPLQELSLRK4	3928.94	10408.8	4745.26
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	SGHFEQAIK	SGHFEQAIK	2	SGHFEQAIK2	99155.7	105787	86116.6
O35217	O35217	MINP1_RAT	Minpp1	Multiple inositol polyphosphate phosphatase 1	1	SGHIVPYASNLIFVLYHCEDAQTPQEK	SGHIVPYASNLIFVLYHC(UniMod:4)EDAQTPQEK	4	SGHIVPYASNLIFVLYHC(UniMod:4)EDAQTPQEK4	9875.83	11483.6	
D3ZF19	D3ZF19	D3ZF19_RAT	Tmem68	Transmembrane protein 68	1	SGHLLAISPGGVR	SGHLLAISPGGVR	3	SGHLLAISPGGVR3	21414.1	13801.4	17235.4
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	SGHPGEEELER	SGHPGEEELER	3	SGHPGEEELER3	5548.52	9900.27	3719.63
P02466	P02466	CO1A2_RAT	Col1a2	Collagen alpha-2(I) chain	1	SGHPGPVGPAGVR	SGHPGPVGPAGVR	3	SGHPGPVGPAGVR3	4688.39	7430.55	5261.89
Q641Z2	Q641Z2	PTN9_RAT	Ptpn9	Tyrosine-protein phosphatase non-receptor type 9	1	SGHTQTDYINASFMDGYK	SGHTQTDYINASFMDGYK	3	SGHTQTDYINASFMDGYK3	3556.14	6211.54	
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	SGICWPTFASAHNMAPR	SGIC(UniMod:4)WPTFASAHNMAPR	3	SGIC(UniMod:4)WPTFASAHNMAPR3	125056	130453	120826
A0A096MKH4	A0A096MKH4	A0A096MKH4_RAT	Ube2j1	Ubiquitin-conjugating enzyme E2, J1	1	SGIDSSQADQEAK	SGIDSSQADQEAK	2	SGIDSSQADQEAK2	2696.14		3735.66
F1MAD3	F1MAD3	F1MAD3_RAT	Pkd1	Polycystin 1, transient receptor potential channel interacting	1	SGIFPLALVLSSHVNK	SGIFPLALVLSSHVNK	3	SGIFPLALVLSSHVNK3	1048.36	4131.89	445.394
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	SGIHTSESSESSAK	SGIHTSESSESSAK	2	SGIHTSESSESSAK2			1149.1
Q9ET64	Q9ET64	NSMA_RAT	Smpd2	Sphingomyelin phosphodiesterase 2	1	SGIIGSGLCVFSR	SGIIGSGLC(UniMod:4)VFSR	2	SGIIGSGLC(UniMod:4)VFSR2	14508.7	18908.2	20077.6
Q5XIU5	Q5XIU5	PSMF1_RAT	Psmf1	Proteasome inhibitor PI31 subunit	1	SGIITPIHEQWEK	SGIITPIHEQWEK	3	SGIITPIHEQWEK3	27511.4	25591.3	15951.5
A0A8J8Y8E0	A0A8J8Y8E0	A0A8J8Y8E0_RAT	Fibp	FGF1 intracellular binding protein	1	SGILEQTGATTGVLQSDTMDHYR	SGILEQTGATTGVLQSDTMDHYR	3	SGILEQTGATTGVLQSDTMDHYR3	10003.6	13018.1	11040.1
F7FQB8	F7FQB8	F7FQB8_RAT	Kpna4	Karyopherin subunit alpha 4	1	SGILPILVHCLER	SGILPILVHC(UniMod:4)LER	3	SGILPILVHC(UniMod:4)LER3	75958.7	37245	36024.6
A0A8I5ZWC6	A0A8I5ZWC6	A0A8I5ZWC6_RAT	Kpna3	Importin subunit alpha	1	SGILPILVK	SGILPILVK	2	SGILPILVK2	114255	131082	105459
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	SGINPFDSQEAK	SGINPFDSQEAK	2	SGINPFDSQEAK2	40149.5	30169.8	27321.7
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	SGINPFDSQEAKPYK	SGINPFDSQEAKPYK	2	SGINPFDSQEAKPYK2	16467.9	17158.7	17414.5
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	SGINPFDSQEAKPYK	SGINPFDSQEAKPYK	3	SGINPFDSQEAKPYK3	247701	324351	292388
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	SGIPEAQETEAK	SGIPEAQETEAK	2	SGIPEAQETEAK2	159934	140334	136960
P01026	P01026	CO3_RAT	C3	Complement C3	1	SGIPIVTSPYQIHFTK	SGIPIVTSPYQIHFTK	2	SGIPIVTSPYQIHFTK2	419207	393892	342484
P01026	P01026	CO3_RAT	C3	Complement C3	1	SGIPIVTSPYQIHFTK	SGIPIVTSPYQIHFTK	3	SGIPIVTSPYQIHFTK3	2.14707e+06	2.22569e+06	2.03834e+06
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	SGITLDGK	SGITLDGK	2	SGITLDGK2	29139.1	15042.7	17574.1
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	SGIVQSGSVIR	SGIVQSGSVIR	2	SGIVQSGSVIR2	44953.3	48393.9	29210.4
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	SGIYETR	SGIYETR	2	SGIYETR2	111876	104829	134436
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	SGIYTIYFNNMPEPK	SGIYTIYFNNMPEPK	2	SGIYTIYFNNMPEPK2	168333	146473	169994
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	SGIYTIYFNNMPEPK	SGIYTIYFNNMPEPK	3	SGIYTIYFNNMPEPK3	11430.1	10885.4	2324.08
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	SGKPAELLK	SGKPAELLK	2	SGKPAELLK2	29641.5	30375.6	30842.3
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	SGKPGPFLLSGSR	SGKPGPFLLSGSR	3	SGKPGPFLLSGSR3	51344.4	52443	47474.9
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	SGKPPINDMFSDLK	SGKPPINDMFSDLK	2	SGKPPINDMFSDLK2	45655.1	56194.9	51885.5
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	SGKPPINDMFSDLK	SGKPPINDMFSDLK	3	SGKPPINDMFSDLK3	111552	118091	124764
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	SGKPPINDMFSDLKDGR	SGKPPINDMFSDLKDGR	3	SGKPPINDMFSDLKDGR3	38769	37779.2	36059.3
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	SGKPPINDMFSDLKDGR	SGKPPINDMFSDLKDGR	4	SGKPPINDMFSDLKDGR4	26122.1	20847.3	35064.5
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	SGKPPLQNNEK	SGKPPLQNNEK	2	SGKPPLQNNEK2			19120.5
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	SGKPPLQNNEK	SGKPPLQNNEK	3	SGKPPLQNNEK3			5001.28
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	SGLAAEK	SGLAAEK	1	SGLAAEK1	14230.2	5577.04	4875.56
Q7TNZ9	Q7TNZ9	Q7TNZ9_RAT	Cmtm6	CKLF-like MARVEL transmembrane domain containing 6	1	SGLAAYFFLGR	SGLAAYFFLGR	2	SGLAAYFFLGR2	53263.4	32515.1	36968.2
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	SGLAGLSPSLATDSSSEDALK	SGLAGLSPSLATDSSSEDALK	3	SGLAGLSPSLATDSSSEDALK3	5040.86	2706.37	
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	SGLAGTINLSER	SGLAGTINLSER	2	SGLAGTINLSER2	19207	16726.4	14826.9
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	SGLALCAIIHR	SGLALC(UniMod:4)AIIHR	3	SGLALC(UniMod:4)AIIHR3	4051.12	1284.34	4721.89
Q6P6Q9	Q6P6Q9	MICU1_RAT	Micu1	Calcium uptake protein 1, mitochondrial	1	SGLCSALTTYFFGADLK	SGLC(UniMod:4)SALTTYFFGADLK	2	SGLC(UniMod:4)SALTTYFFGADLK2	8285.34	6349.23	7513.54
Q6P6Q9	Q6P6Q9	MICU1_RAT	Micu1	Calcium uptake protein 1, mitochondrial	1	SGLCSALTTYFFGADLK	SGLC(UniMod:4)SALTTYFFGADLK	3	SGLC(UniMod:4)SALTTYFFGADLK3	1882.07	1077.9	3082.05
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	SGLDQIK	SGLDQIK	2	SGLDQIK2	14748.6	13749.1	11068.4
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	SGLDVMPNISDILLR	SGLDVMPNISDILLR	2	SGLDVMPNISDILLR2	57483.5	50583.6	59430.1
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	SGLEDTASLDNQPK	SGLEDTASLDNQPK	2	SGLEDTASLDNQPK2	6066.32	4123.32	3351.35
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	SGLEQEPEEPPGWR	SGLEQEPEEPPGWR	2	SGLEQEPEEPPGWR2	59729.4	60174.8	46069.1
M0RA86	M0RA86	M0RA86_RAT	Ccdc9	Coiled-coil domain containing 9	1	SGLEQER	SGLEQER	2	SGLEQER2	10850.5	24089.4	26289.5
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	SGLFPEWK	SGLFPEWK	1	SGLFPEWK1	20965.5	36540.2	32440.9
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	SGLFPEWK	SGLFPEWK	2	SGLFPEWK2	461663	431786	403557
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	SGLGASPLQSAR	SGLGASPLQSAR	2	SGLGASPLQSAR2	127297	101918	105293
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	SGLGDDLVQALGLSK	SGLGDDLVQALGLSK	2	SGLGDDLVQALGLSK2	67034.3	65732.4	163243
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	SGLGDDLVQALGLSK	SGLGDDLVQALGLSK	3	SGLGDDLVQALGLSK3	4376.47	3695.5	7048.71
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	SGLGELILPENEPGSSIMPGK	SGLGELILPENEPGSSIMPGK	3	SGLGELILPENEPGSSIMPGK3	59867.9	55753.5	59486.4
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	SGLGSVLR	SGLGSVLR	2	SGLGSVLR2	42468.2	40820.6	34083.1
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	SGLHLEQHLSEVALQTALASSSR	SGLHLEQHLSEVALQTALASSSR	3	SGLHLEQHLSEVALQTALASSSR3		8051.49	11221.1
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	SGLHLEQHLSEVALQTALASSSR	SGLHLEQHLSEVALQTALASSSR	4	SGLHLEQHLSEVALQTALASSSR4	17353	11648.4	15325.9
A0A8I5Y6A1	A0A8I5Y6A1	A0A8I5Y6A1_RAT	Ablim1	Actin-binding LIM protein 1	1	SGLHRPVSTDFAQYNSYGDVSGGVR	SGLHRPVSTDFAQYNSYGDVSGGVR	4	SGLHRPVSTDFAQYNSYGDVSGGVR4	3430.51	8376.63	5706
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	SGLIFYR	SGLIFYR	2	SGLIFYR2	88419.7	96174.9	91478.6
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	SGLIHVGDELR	SGLIHVGDELR	3	SGLIHVGDELR3	44840.2	29793.8	32502.4
Q8R508	Q8R508	FAT3_RAT	Fat3	Protocadherin Fat 3	1	SGLIVTAQPLNTVK	SGLIVTAQPLNTVK	2	SGLIVTAQPLNTVK2	10637	6680.88	7445.72
D3ZD11	D3ZD11	D3ZD11_RAT	Spcs2	Signal peptidase complex subunit 2	1	SGLLDKWK	SGLLDKWK	2	SGLLDKWK2	11150.9	9267.83	11576.8
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	SGLLEVLVR	SGLLEVLVR	2	SGLLEVLVR2	186843	169329	172661
P54777	P54777	PEX6_RAT	Pex6	Peroxisomal ATPase PEX6	1	SGLLLHGPPGTGK	SGLLLHGPPGTGK	3	SGLLLHGPPGTGK3	3657.55	13909.3	7329.06
G3V9L1	G3V9L1	G3V9L1_RAT	Tex2	Testis expressed 2	1	SGLLPAHSR	SGLLPAHSR	2	SGLLPAHSR2	15858.6		18893.1
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	SGLLSVSSGAAAHR	SGLLSVSSGAAAHR	2	SGLLSVSSGAAAHR2	7526.29		3963.55
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	SGLLSVSSGAAAHR	SGLLSVSSGAAAHR	3	SGLLSVSSGAAAHR3	14689.6	21213	
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	SGLLTETSSR	SGLLTETSSR	2	SGLLTETSSR2	293253	246104	230415
Q5XIA5	Q5XIA5	Q5XIA5_RAT	Coasy	Coenzyme A synthase	1	SGLLVLTTPLATLAAR	SGLLVLTTPLATLAAR	2	SGLLVLTTPLATLAAR2	4918.2	3750.86	
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	SGLNEDQAMMQDCYSK	SGLNEDQAMMQDC(UniMod:4)YSK	2	SGLNEDQAMMQDC(UniMod:4)YSK2	1975.61	1868.17	2153.18
A0A8I6ARV9	A0A8I6ARV9	A0A8I6ARV9_RAT	Ctsa	Carboxypeptidase	1	SGLNIYNLYAPCAGGVPGR	SGLNIYNLYAPC(UniMod:4)AGGVPGR	3	SGLNIYNLYAPC(UniMod:4)AGGVPGR3	7833.81	13179.7	14443.4
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	SGLNLGVR	SGLNLGVR	2	SGLNLGVR2	17351.4	13289.9	17614.1
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	SGLPDLILGK	SGLPDLILGK	2	SGLPDLILGK2	213736	234157	229772
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	SGLPDVKPSGASLEDIMHR	SGLPDVKPSGASLEDIMHR	3	SGLPDVKPSGASLEDIMHR3	7622.35	19056.5	26791.3
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	SGLPDVKPSGASLEDIMHR	SGLPDVKPSGASLEDIMHR	4	SGLPDVKPSGASLEDIMHR4	36595.3	45905.6	47031.4
F1LU14	F1LU14	F1LU14_RAT	Snx32	Sorting nexin	1	SGLPHFAQPEFSVVR	SGLPHFAQPEFSVVR	3	SGLPHFAQPEFSVVR3	9895.55	10800	13329.1
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	SGLPRPSAPSAGGIPVPR	SGLPRPSAPSAGGIPVPR	3	SGLPRPSAPSAGGIPVPR3	115897	116588	98440.6
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	SGLPTNHTTDSLQLWFVR	SGLPTNHTTDSLQLWFVR	3	SGLPTNHTTDSLQLWFVR3	7250.12	7328.11	6177.17
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	SGLPVGPENGELSK	SGLPVGPENGELSK	2	SGLPVGPENGELSK2	23454.6	32203.4	22973.4
O55012	O55012	PICAL_RAT	Picalm	Phosphatidylinositol-binding clathrin assembly protein	1	SGLQGYDMSTFIR	SGLQGYDMSTFIR	2	SGLQGYDMSTFIR2	29194.2	28169.7	26210.7
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	SGLSDIVLGK	SGLSDIVLGK	2	SGLSDIVLGK2	17921.9	19120.5	13698.5
Q4V7C1	Q4V7C1	CEP43_RAT	Cep43	Centrosomal protein 43	1	SGLSSLAGAPSLTDAESK	SGLSSLAGAPSLTDAESK	2	SGLSSLAGAPSLTDAESK2	8304.93	9785.91	
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	SGLSTGHWSGEVNDK	SGLSTGHWSGEVNDK	2	SGLSTGHWSGEVNDK2	4338.77	1541.04	9981.05
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	SGLSTGHWSGEVNDK	SGLSTGHWSGEVNDK	3	SGLSTGHWSGEVNDK3	84522.8	86251.8	102380
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	SGLTADSK	SGLTADSK	2	SGLTADSK2	29510.3	56763.1	69984.5
P17945	P17945	HGF_RAT	Hgf	Hepatocyte growth factor	1	SGLTCSMWDK	SGLTC(UniMod:4)SMWDK	2	SGLTC(UniMod:4)SMWDK2	13191.7	7495.33	5556.85
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	SGLTGQYPLSDYAVLTEAR	SGLTGQYPLSDYAVLTEAR	3	SGLTGQYPLSDYAVLTEAR3	8207.92	18556.4	16065.2
A0A8I6GK77	A0A8I6GK77	A0A8I6GK77_RAT	Bcas3	BCAS3, microtubule associated cell migration factor	1	SGLTMVGK	SGLTMVGK	2	SGLTMVGK2	6001.12	2508.79	10988.9
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	SGLTPCYPCPR	SGLTPC(UniMod:4)YPC(UniMod:4)PR	2	SGLTPC(UniMod:4)YPC(UniMod:4)PR2	113207	125527	131740
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	SGLVQLMDR	SGLVQLMDR	2	SGLVQLMDR2	18326.6	20989.5	19318.8
P0CE43	P0CE43;Q9QZC5	GRB10_RAT	Grb10	Growth factor receptor-bound protein 10	0	SGLYYSTK	SGLYYSTK	2	SGLYYSTK2	45458.9	40976.8	53051.3
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	SGMAQQIAYEMHLEQQSEGELQK	SGMAQQIAYEMHLEQQSEGELQK	3	SGMAQQIAYEMHLEQQSEGELQK3	3937.73	7686.42	13661.3
Q6AYY8	Q6AYY8	ACATN_RAT	Slc33a1	Acetyl-coenzyme A transporter 1	1	SGMFGHALDMK	SGMFGHALDMK	2	SGMFGHALDMK2	2738.53	5769.66	2079.55
Q6AYY8	Q6AYY8	ACATN_RAT	Slc33a1	Acetyl-coenzyme A transporter 1	1	SGMFGHALDMK	SGMFGHALDMK	3	SGMFGHALDMK3	2746.79	12539	2721.44
A0A8I5ZQB2	A0A8I5ZQB2	A0A8I5ZQB2_RAT	Hacd1	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase	1	SGMFSVR	SGMFSVR	2	SGMFSVR2	18222.3	23116.5	21232.8
Q68FY0	Q68FY0	QCR1_RAT	Uqcrc1	Cytochrome b-c1 complex subunit 1, mitochondrial	1	SGMFWLR	SGMFWLR	2	SGMFWLR2	428220	404485	414936
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	SGMISGLDFSDVMVTIR	SGMISGLDFSDVMVTIR	2	SGMISGLDFSDVMVTIR2	2313.52		4655.67
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	SGMMQCVIAVADK	SGMMQC(UniMod:4)VIAVADK	2	SGMMQC(UniMod:4)VIAVADK2	12563.4	7545.14	10811.9
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	SGMVQTEAQYK	SGMVQTEAQYK	2	SGMVQTEAQYK2	19134.2	16374	16007.2
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	SGMVQTEAQYR	SGMVQTEAQYR	2	SGMVQTEAQYR2	231654	167923	211945
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	SGMYTVAMAYCGSGNNK	SGMYTVAMAYC(UniMod:4)GSGNNK	2	SGMYTVAMAYC(UniMod:4)GSGNNK2	23751.9	19314.2	20486.2
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	SGNALFHASTLHR	SGNALFHASTLHR	2	SGNALFHASTLHR2	7262.39		3771.92
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	SGNALFHASTLHR	SGNALFHASTLHR	3	SGNALFHASTLHR3	55173.7	25299.4	35900.9
D3Z9I1	D3Z9I1	D3Z9I1_RAT	Coa3	Cytochrome c oxidase assembly factor 3	1	SGNAPFAQR	SGNAPFAQR	2	SGNAPFAQR2	32084	45837.7	23980.1
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	SGNCYLDIRPR	SGNC(UniMod:4)YLDIRPR	3	SGNC(UniMod:4)YLDIRPR3	149310	190269	170036
A0A8I5ZU41	A0A8I5ZU41	A0A8I5ZU41_RAT	Amy1	Alpha-amylase	1	SGNEDEFRDMVNR	SGNEDEFRDMVNR	3	SGNEDEFRDMVNR3	5880.53	19841.3	8769.18
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	SGNEVHYHVTAGPHWGQLLR	SGNEVHYHVTAGPHWGQLLR	3	SGNEVHYHVTAGPHWGQLLR3	4098.96	4318.18	3133.45
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	SGNEVHYHVTAGPHWGQLLR	SGNEVHYHVTAGPHWGQLLR	4	SGNEVHYHVTAGPHWGQLLR4	31851.9	42246.2	31463
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	SGNGEVTFENVK	SGNGEVTFENVK	2	SGNGEVTFENVK2		4270.35	2373.71
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	SGNGGTFTEK	SGNGGTFTEK	2	SGNGGTFTEK2	13655.1	18967.9	22298.6
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	SGNGGTFTEKDEK	SGNGGTFTEKDEK	2	SGNGGTFTEKDEK2	1729.12	4077.03	990.178
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	SGNGGTFTEKDEK	SGNGGTFTEKDEK	3	SGNGGTFTEKDEK3		31437.2	
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	SGNGIPSR	SGNGIPSR	2	SGNGIPSR2		27146.9	
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	SGNMIQSANDK	SGNMIQSANDK	2	SGNMIQSANDK2	9614.07	8840.79	12002.7
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	SGNPNYPHEFSQK	SGNPNYPHEFSQK	3	SGNPNYPHEFSQK3	23999.6	18832	6511.1
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	SGNQFVLYQVTEGTK	SGNQFVLYQVTEGTK	2	SGNQFVLYQVTEGTK2	283920	256313	224848
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	SGNQFVLYQVTEGTK	SGNQFVLYQVTEGTK	3	SGNQFVLYQVTEGTK3	1.56617e+06	1.54381e+06	1.47469e+06
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	SGNQFVLYQVTEGTKK	SGNQFVLYQVTEGTKK	2	SGNQFVLYQVTEGTKK2	272307	282634	285156
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	SGNQFVLYQVTEGTKK	SGNQFVLYQVTEGTKK	3	SGNQFVLYQVTEGTKK3	256091	174640	151196
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	SGNQFVLYQVTEGTKKDGSK	SGNQFVLYQVTEGTKKDGSK	4	SGNQFVLYQVTEGTKKDGSK4	4857.83	10976.7	4617.78
P14270	P14270;P14646;P54748	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	0	SGNQVSEYISNTFLDK	SGNQVSEYISNTFLDK	2	SGNQVSEYISNTFLDK2	33705.9	28172.2	39048.6
P14270	P14270;P14646;P54748	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	0	SGNQVSEYISNTFLDK	SGNQVSEYISNTFLDK	3	SGNQVSEYISNTFLDK3	7700.03	2958.14	8618.92
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	SGNSGNQRPSYQK	SGNSGNQRPSYQK	2	SGNSGNQRPSYQK2			1466.51
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	SGNSGNQRPSYQK	SGNSGNQRPSYQK	3	SGNSGNQRPSYQK3			30211.3
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	SGNTVQYWLLLDR	SGNTVQYWLLLDR	2	SGNTVQYWLLLDR2	52546	30220.7	57537
Q66HD3	Q66HD3	NASP_RAT	Nasp	Nuclear autoantigenic sperm protein	1	SGNVAELALK	SGNVAELALK	2	SGNVAELALK2	4521.38	7769.21	2672.92
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	SGNVTTVMETIGR	SGNVTTVMETIGR	2	SGNVTTVMETIGR2	50751.1	57173.5	63332.1
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	SGNWDSSDAWGTR	SGNWDSSDAWGTR	2	SGNWDSSDAWGTR2	46601.4	51477.9	52462.6
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	SGNYESHSFSEER	SGNYESHSFSEER	3	SGNYESHSFSEER3	1609.15	4427.4	
Q68FQ9	Q68FQ9	Q68FQ9_RAT	Lancl2	LanC lantibiotic synthetase component C-like 2 (Bacterial)	1	SGNYPSSLSNETDR	SGNYPSSLSNETDR	2	SGNYPSSLSNETDR2	44563.3	46424.9	35202.6
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	SGPAGSVVK	SGPAGSVVK	2	SGPAGSVVK2	43017.1	35739	56416.9
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	SGPAMQKPNR	SGPAMQKPNR	2	SGPAMQKPNR2			40299.9
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	SGPANSFNDR	SGPANSFNDR	2	SGPANSFNDR2	42371.3	45393.7	52980.9
D4ADE5	D4ADE5	D4ADE5_RAT	Setd7	Histone-lysine N-methyltransferase SETD7	1	SGPEAPEWYQVELK	SGPEAPEWYQVELK	2	SGPEAPEWYQVELK2	9395.4	7085.46	8538.4
P58366	P58366	ANKH_RAT	Ankh	Progressive ankylosis protein homolog	1	SGPELGGDATIR	SGPELGGDATIR	2	SGPELGGDATIR2	5069.6		
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	SGPENLLVEPWTR	SGPENLLVEPWTR	2	SGPENLLVEPWTR2	42740.7	58978.5	64367.9
P20788	P20788	UCRI_RAT	Uqcrfs1	Cytochrome b-c1 complex subunit Rieske, mitochondrial	1	SGPFAPVLSATSR	SGPFAPVLSATSR	2	SGPFAPVLSATSR2	36826.3	31975.4	21537.5
P85108	P69897;Q6P9T8;B4F7C2;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	SGPFGQIFR	SGPFGQIFR	2	SGPFGQIFR2	133699	106839	94449.8
P85108	P69897;Q6P9T8;B4F7C2;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	SGPFGQIFRPDNFVFGQSGAGNNWAK	SGPFGQIFRPDNFVFGQSGAGNNWAK	3	SGPFGQIFRPDNFVFGQSGAGNNWAK3	8.66449e+06	1.01203e+07	9.38796e+06
P85108	P69897;Q6P9T8;B4F7C2;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	SGPFGQIFRPDNFVFGQSGAGNNWAK	SGPFGQIFRPDNFVFGQSGAGNNWAK	4	SGPFGQIFRPDNFVFGQSGAGNNWAK4	79273.8	91487.5	90264.6
Q4QQV0	Q4QQV0	Q4QQV0_RAT	Tubb6	Tubulin beta chain	1	SGPFGQLFRPDNFIFGQTGAGNNWAK	SGPFGQLFRPDNFIFGQTGAGNNWAK	3	SGPFGQLFRPDNFIFGQTGAGNNWAK3	56337.3	49706.5	63605.8
Q5PQT0	Q5PQT0	Q5PQT0_RAT	Pask	PAS domain containing serine/threonine kinase	1	SGPGEMSSDAK	SGPGEMSSDAK	2	SGPGEMSSDAK2	7357.5	4207.16	
D3ZL50	D3ZL50	D3ZL50_RAT	Skic3	Tetratricopeptide repeat domain 37	1	SGPGLIGLGIR	SGPGLIGLGIR	2	SGPGLIGLGIR2	5370.52	5927.58	7683.32
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	SGPGSQLNTK	SGPGSQLNTK	2	SGPGSQLNTK2	87231.5	75298.4	79938.4
P0C5W1	P0C5W1	MAP1S_RAT	Map1s	Microtubule-associated protein 1S	1	SGPGVVTTKPR	SGPGVVTTKPR	2	SGPGVVTTKPR2	9187.04	7873.08	
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	SGPIFIVVPNGK	SGPIFIVVPNGK	2	SGPIFIVVPNGK2	36795.6	44425.2	41473.2
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	SGPKPFSAPK	SGPKPFSAPK	2	SGPKPFSAPK2	17437.5	9711.58	17353
D4A7B6	D4A7B6	D4A7B6_RAT	Tmem87b	Transmembrane protein 87B	1	SGPLIFR	SGPLIFR	2	SGPLIFR2	31669.4	33557.1	28918.8
Q6IN36	Q6IN36	WIPF1_RAT	Wipf1	WAS/WASL-interacting protein family member 1	1	SGPLPPPPPINR	SGPLPPPPPINR	2	SGPLPPPPPINR2	440442	453141	448512
Q6IN36	Q6IN36	WIPF1_RAT	Wipf1	WAS/WASL-interacting protein family member 1	1	SGPLPPPPTERPPPPVR	SGPLPPPPTERPPPPVR	3	SGPLPPPPTERPPPPVR3	99003.7	77964.8	85518.3
Q5RK08	Q5RK08	Q5RK08_RAT	Nipsnap2	Glioblastoma amplified sequence	1	SGPNIYELR	SGPNIYELR	2	SGPNIYELR2	130514	114588	127734
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	SGPPAAGPGNR	SGPPAAGPGNR	2	SGPPAAGPGNR2	675594		611492
Q6IN36	Q6IN36	WIPF1_RAT	Wipf1	WAS/WASL-interacting protein family member 1	1	SGPPEPPR	SGPPEPPR	2	SGPPEPPR2	494670	505575	560276
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	SGPSCWHR	SGPSC(UniMod:4)WHR	2	SGPSC(UniMod:4)WHR2	15117	14074.3	10945.3
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	SGPSDHDLKPNATTR	SGPSDHDLKPNATTR	3	SGPSDHDLKPNATTR3	4422.63		10081.3
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	SGPSDHDLKPNATTR	SGPSDHDLKPNATTR	4	SGPSDHDLKPNATTR4	7434.78		7090.09
P10247	P10247	HG2A_RAT	Cd74	H-2 class II histocompatibility antigen gamma chain	1	SGPVNYPQLK	SGPVNYPQLK	2	SGPVNYPQLK2	2119.51		
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	SGPYGFHEMQELWAK	SGPYGFHEMQELWAK	3	SGPYGFHEMQELWAK3	30278.5	21980.5	33438.5
Q80YN4	Q80YN4	CORIN_RAT	Corin	Atrial natriuretic peptide-converting enzyme	1	SGQCIPSTFQCDGDEDCKDGSDEENCSDR	SGQC(UniMod:4)IPSTFQC(UniMod:4)DGDEDC(UniMod:4)KDGSDEENC(UniMod:4)SDR	4	SGQC(UniMod:4)IPSTFQC(UniMod:4)DGDEDC(UniMod:4)KDGSDEENC(UniMod:4)SDR4	9759.14	4561.75	
P62882	P62882	GNB5_RAT	Gnb5	Guanine nucleotide-binding protein subunit beta-5	1	SGQCVQAFETHESDVNSVR	SGQC(UniMod:4)VQAFETHESDVNSVR	3	SGQC(UniMod:4)VQAFETHESDVNSVR3	7536.99	7679.72	4511.07
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	SGQDPYAR	SGQDPYAR	2	SGQDPYAR2	205672	213929	226365
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	SGQEHWFTELPPVLTFELSR	SGQEHWFTELPPVLTFELSR	3	SGQEHWFTELPPVLTFELSR3	17002	12642.8	10059.7
A0A8I6GDP5	A0A8I6GDP5	A0A8I6GDP5_RAT	Tjap1	Tight junction associated protein 1	1	SGQEVASPSR	SGQEVASPSR	2	SGQEVASPSR2	4248.2		4807.79
D3ZH14	D3ZH14	D3ZH14_RAT	Tmcc1	Transmembrane and coiled-coil domain family 1	1	SGQEVASVIQSGRPR	SGQEVASVIQSGRPR	3	SGQEVASVIQSGRPR3	6417.92		
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	SGQFFLDSIAHNITWDPAGNR	SGQFFLDSIAHNITWDPAGNR	3	SGQFFLDSIAHNITWDPAGNR3	18786.9	17871.1	14822.1
P50878	P50878	RL4_RAT	Rpl4	Large ribosomal subunit protein uL4	1	SGQGAFGNMCR	SGQGAFGNMC(UniMod:4)R	2	SGQGAFGNMC(UniMod:4)R2	27593.7	24378.5	23444.3
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	SGQGDSEVSSPFTPVADEDSVVFNK	SGQGDSEVSSPFTPVADEDSVVFNK	3	SGQGDSEVSSPFTPVADEDSVVFNK3	38236.8	52988.9	50013.2
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	SGQKPVLSDVHAELDR	SGQKPVLSDVHAELDR	3	SGQKPVLSDVHAELDR3	26779.4	28793.5	25767.4
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	SGQKPVLSDVHAELDR	SGQKPVLSDVHAELDR	4	SGQKPVLSDVHAELDR4	52548.4	67554.9	82190.3
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	SGQLLWEALENLVNR	SGQLLWEALENLVNR	2	SGQLLWEALENLVNR2	15735.6		
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	SGQLLWEALENLVNR	SGQLLWEALENLVNR	3	SGQLLWEALENLVNR3	38132	3629.07	
Q5XIN4	Q5XIN4	Q5XIN4_RAT	Mtmr9	Myotubularin related protein 9	1	SGQPLTGTNGR	SGQPLTGTNGR	2	SGQPLTGTNGR2	18627.6	20669.6	8959.33
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	SGQQACEGVGSFLLYSVHEGIR	SGQQAC(UniMod:4)EGVGSFLLYSVHEGIR	3	SGQQAC(UniMod:4)EGVGSFLLYSVHEGIR3	132280	186148	147224
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	SGQQIVGPPR	SGQQIVGPPR	2	SGQQIVGPPR2	126317	188020	181922
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	SGQQIVGPPRK	SGQQIVGPPRK	2	SGQQIVGPPRK2	6437.84	3200.52	4806.81
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	SGQQIVGPPRK	SGQQIVGPPRK	3	SGQQIVGPPRK3	30457.4	28177.5	38577.9
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	SGQSAAGASPAGGIDTR	SGQSAAGASPAGGIDTR	2	SGQSAAGASPAGGIDTR2	6.32876e+06	6.24612e+06	6.72251e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	SGQSAAGASPAGGIDTR	SGQSAAGASPAGGIDTR	3	SGQSAAGASPAGGIDTR3	287046	306140	316478
B3DMA2	B3DMA2	ACD11_RAT	Acad11	Acyl-CoA dehydrogenase family member 11	1	SGQSNPTFFLQK	SGQSNPTFFLQK	2	SGQSNPTFFLQK2	21472.1	21648	29464.8
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	SGQSSLALNTWWK	SGQSSLALNTWWK	2	SGQSSLALNTWWK2	6215.46	7659.96	3866.84
Q9WVK3	Q9WVK3	PECR_RAT	Pecr	Peroxisomal trans-2-enoyl-CoA reductase	1	SGQSYLAAGLLQNQVAVVTGGATGIGK	SGQSYLAAGLLQNQVAVVTGGATGIGK	3	SGQSYLAAGLLQNQVAVVTGGATGIGK3	3622.25	3396.66	2935.56
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	SGQTCEVVHCPALKPPENGFFIQNTCK	SGQTC(UniMod:4)EVVHC(UniMod:4)PALKPPENGFFIQNTC(UniMod:4)K	4	SGQTC(UniMod:4)EVVHC(UniMod:4)PALKPPENGFFIQNTC(UniMod:4)K4	20373.3	18477.3	24342.4
P62815	P62815	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	1	SGQVLEVSGSK	SGQVLEVSGSK	2	SGQVLEVSGSK2	38274.5	37414.8	34394.8
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	SGQYEASEQGTGR	SGQYEASEQGTGR	2	SGQYEASEQGTGR2	1849.08		4123.69
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	SGRPSPPIIQENAVSGYSLFTCR	SGRPSPPIIQENAVSGYSLFTC(UniMod:4)R	3	SGRPSPPIIQENAVSGYSLFTC(UniMod:4)R3	70789.5	82573.4	81674.8
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	SGRQPSDLPGIVAVR	SGRQPSDLPGIVAVR	3	SGRQPSDLPGIVAVR3	7748.99	6498.11	16755.4
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	SGRYEMEETEVVITSYQK	SGRYEMEETEVVITSYQK	3	SGRYEMEETEVVITSYQK3	124384	131020	130440
F1M0H0	F1M0H0	F1M0H0_RAT	Zfp318	Zinc finger protein 318	1	SGSATVSK	SGSATVSK	1	SGSATVSK1	1174.82	2196.75	
P01026	P01026	CO3_RAT	C3	Complement C3	1	SGSDEVQAGQER	SGSDEVQAGQER	2	SGSDEVQAGQER2	500874		1.02838e+06
P01026	P01026	CO3_RAT	C3	Complement C3	1	SGSDEVQAGQERR	SGSDEVQAGQERR	3	SGSDEVQAGQERR3			20377.1
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	SGSDSSVGAR	SGSDSSVGAR	2	SGSDSSVGAR2			8246.94
P15650	P15650	ACADL_RAT	Acadl	Long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	SGSDWILNGSK	SGSDWILNGSK	2	SGSDWILNGSK2	15415.6	13816.9	12997.9
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	SGSELLDR	SGSELLDR	2	SGSELLDR2	41371.5	44606.3	54525.4
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	SGSGLVGR	SGSGLVGR	1	SGSGLVGR1	15955.9	19723.4	24323
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	SGSGMSVISSSSADQR	SGSGMSVISSSSADQR	2	SGSGMSVISSSSADQR2	8526.93	11393.4	9012.32
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	SGSGTMNLGGSLTR	SGSGTMNLGGSLTR	2	SGSGTMNLGGSLTR2	415855	301860	301686
A0A0G2K975	A0A0G2K975	A0A0G2K975_RAT	Cfhr4	Similar to complement factor H-related protein	1	SGSITCLQTGWSAQPSCIK	SGSITC(UniMod:4)LQTGWSAQPSC(UniMod:4)IK	3	SGSITC(UniMod:4)LQTGWSAQPSC(UniMod:4)IK3	2057.23	4747.3	
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	SGSIVVEGHELHEEDIR	SGSIVVEGHELHEEDIR	3	SGSIVVEGHELHEEDIR3	15345.2	21233.1	34623.8
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	SGSIVVEGHELHEEDIR	SGSIVVEGHELHEEDIR	4	SGSIVVEGHELHEEDIR4	30817.9	46658.9	33045.3
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	SGSKDPGMTGSYGDIFESSSLRPR	SGSKDPGMTGSYGDIFESSSLRPR	3	SGSKDPGMTGSYGDIFESSSLRPR3	35674.7	25514.2	20835
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	SGSKDPGMTGSYGDIFESSSLRPR	SGSKDPGMTGSYGDIFESSSLRPR	4	SGSKDPGMTGSYGDIFESSSLRPR4	70493.2	72062.3	84747.3
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	SGSKFPVFNMSYNPAENAVLLCTR	SGSKFPVFNMSYNPAENAVLLC(UniMod:4)TR	3	SGSKFPVFNMSYNPAENAVLLC(UniMod:4)TR3	27085.5	36376.9	25430.8
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	SGSLAAEAIFK	SGSLAAEAIFK	2	SGSLAAEAIFK2	80095.3	81267.7	82640.7
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	SGSLAALEK	SGSLAALEK	2	SGSLAALEK2	56178.6	51300.8	69148.8
D4A748	D4A748	D4A748_RAT	Wdfy4	WDFY family member 4	1	SGSLADTSVK	SGSLADTSVK	2	SGSLADTSVK2	4811.01	5258.01	8386.11
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	SGSLAVDNSDPILK	SGSLAVDNSDPILK	2	SGSLAVDNSDPILK2	7432.14	6159.21	4899.81
F1M3G7	F1M3G7	AKP13_RAT	Akap13	A-kinase anchor protein 13	1	SGSLDSELSVSPK	SGSLDSELSVSPK	2	SGSLDSELSVSPK2	2007.72	5031.58	
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	SGSLEFSIPGQPNDFFPVQVSFISK	SGSLEFSIPGQPNDFFPVQVSFISK	3	SGSLEFSIPGQPNDFFPVQVSFISK3	8707.23	8267.55	7509.81
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	SGSLFGSSR	SGSLFGSSR	2	SGSLFGSSR2	14786.5	23913.6	11361
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	SGSLLYLHDTLEDIKR	SGSLLYLHDTLEDIKR	4	SGSLLYLHDTLEDIKR4	7519.84	3718.27	7570.28
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	SGSMAGK	SGSMAGK	1	SGSMAGK1	1019.15		
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	SGSMSAYEMR	SGSMSAYEMR	2	SGSMSAYEMR2	224102	215133	207874
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	SGSPGSNQALLLLR	SGSPGSNQALLLLR	2	SGSPGSNQALLLLR2	22838.5	17997.1	20778.5
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	SGSPLPSGSETPQPSGR	SGSPLPSGSETPQPSGR	2	SGSPLPSGSETPQPSGR2	59785.1	60204	51959.4
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	SGSQFDWALMR	SGSQFDWALMR	2	SGSQFDWALMR2	20525.6	17766.3	11410.5
Q04807	Q04807	GLCM1_RAT	Glycam1	Glycosylation-dependent cell adhesion molecule 1	1	SGSSQQEETTSAATSEGK	SGSSQQEETTSAATSEGK	2	SGSSQQEETTSAATSEGK2	42771.7		43639.8
P63219	P63219;F2Z3T8	GBG5_RAT	Gng5	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5	0	SGSSSVAAMK	SGSSSVAAMK	2	SGSSSVAAMK2	5625	3544.44	6799.77
P20650	P20650	PPM1A_RAT	Ppm1a	Protein phosphatase 1A	1	SGSTAVGVLISPQHTYFINCGDSR	SGSTAVGVLISPQHTYFINC(UniMod:4)GDSR	3	SGSTAVGVLISPQHTYFINC(UniMod:4)GDSR3	12440.3	15521.7	13700.8
P35815	P35815	PPM1B_RAT	Ppm1b	Protein phosphatase 1B	1	SGSTAVGVMISPTHIYFINCGDSR	SGSTAVGVMISPTHIYFINC(UniMod:4)GDSR	3	SGSTAVGVMISPTHIYFINC(UniMod:4)GDSR3	27564	21541.9	26481
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	SGSTDSLNPRPQTTISPADLHGMWYPTVR	SGSTDSLNPRPQTTISPADLHGMWYPTVR	4	SGSTDSLNPRPQTTISPADLHGMWYPTVR4	2398.41	8543.24	3768.54
Q0PMD2	Q0PMD2	ANTR1_RAT	Antxr1	Anthrax toxin receptor 1	1	SGSVLHHWNEIYYFVEQLAHR	SGSVLHHWNEIYYFVEQLAHR	4	SGSVLHHWNEIYYFVEQLAHR4	10354.8	9402.64	7680.95
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	SGSVYEPLK	SGSVYEPLK	2	SGSVYEPLK2	14027.7	18201.3	13455.9
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	SGSYENGDMGEGQAK	SGSYENGDMGEGQAK	2	SGSYENGDMGEGQAK2	964.6	2094.69	
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	SGSYLIR	SGSYLIR	2	SGSYLIR2	15259.8	27380.9	19284.8
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	SGTELSAVGSVCSDADCQEYAK	SGTELSAVGSVC(UniMod:4)SDADC(UniMod:4)QEYAK	3	SGTELSAVGSVC(UniMod:4)SDADC(UniMod:4)QEYAK3	2245.21		1774.01
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	SGTFCLADTCLLLMDK	SGTFC(UniMod:4)LADTC(UniMod:4)LLLMDK	2	SGTFC(UniMod:4)LADTC(UniMod:4)LLLMDK2	28025.9	15747.2	20264.7
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	SGTFCLADTCLLLMDKR	SGTFC(UniMod:4)LADTC(UniMod:4)LLLMDKR	3	SGTFC(UniMod:4)LADTC(UniMod:4)LLLMDKR3	189741	157911	82489.6
G3V6U9	G3V6U9	SETD3_RAT	Setd3	Actin-histidine N-methyltransferase	1	SGTGATATVSPK	SGTGATATVSPK	2	SGTGATATVSPK2	36119.9	27458.3	23876.6
P63081	P63081	VATL_RAT	Atp6v0c	V-type proton ATPase 16 kDa proteolipid subunit c	1	SGTGIAAMSVMRPELIMK	SGTGIAAMSVMRPELIMK	3	SGTGIAAMSVMRPELIMK3	135818	106319	225504
Q64537	Q64537	CPNS1_RAT	Capns1	Calpain small subunit 1	1	SGTIGSNELPGAFEAAGFHLNQHIYSMIIR	SGTIGSNELPGAFEAAGFHLNQHIYSMIIR	4	SGTIGSNELPGAFEAAGFHLNQHIYSMIIR4	171517	170569	178998
Q63372	Q63372	NRX1A_RAT	Nrxn1	Neurexin-1	1	SGTISVNTLR	SGTISVNTLR	2	SGTISVNTLR2	24811	22245.7	20398.2
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	SGTMNSYEMR	SGTMNSYEMR	2	SGTMNSYEMR2	1.96369e+06	2.14677e+06	2.22514e+06
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	SGTNCLENLVISNGEK	SGTNC(UniMod:4)LENLVISNGEK	2	SGTNC(UniMod:4)LENLVISNGEK2	12774.3	10387.3	10946.2
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	SGTNCLENLVISNGEK	SGTNC(UniMod:4)LENLVISNGEK	3	SGTNC(UniMod:4)LENLVISNGEK3	6135.76	6151.24	7938.2
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	SGTNCLENVVILNGEK	SGTNC(UniMod:4)LENVVILNGEK	2	SGTNC(UniMod:4)LENVVILNGEK2	5178.66	3885.26	3705.32
A0A8I6ASD0	A0A8I6ASD0	A0A8I6ASD0_RAT	ENSRNOG00000064832	Immunoglobulin V-set domain-containing protein	1	SGTQFSLK	SGTQFSLK	2	SGTQFSLK2	19795.6	21055.3	20663.4
A0A8I6ANU1	A0A8I5ZZK2;A0A8I6AE55;A0A8I5ZPG7;A0A0G2KAZ1;A0A8I5ZQ09;A0A8I6ANU1;A0A8I5ZV61;A0A8I5ZXJ4	A0A8I6ANU1_RAT	ENSRNOG00000068865	Ig-like domain-containing protein	0	SGTQYSLK	SGTQYSLK	1	SGTQYSLK1	6062.1	4085.42	3325.83
A0A8I6ANU1	A0A8I5ZZK2;A0A8I6AE55;A0A8I5ZPG7;A0A0G2KAZ1;A0A8I5ZQ09;A0A8I6ANU1;A0A8I5ZV61;A0A8I5ZXJ4	A0A8I6ANU1_RAT	ENSRNOG00000068865	Ig-like domain-containing protein	0	SGTQYSLK	SGTQYSLK	2	SGTQYSLK2	189469	158900	151438
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	SGTSEFLNK	SGTSEFLNK	2	SGTSEFLNK2	1.87974e+06	1.64785e+06	1.84506e+06
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	SGTSIALK	SGTSIALK	2	SGTSIALK2	74478.3	88260.9	85526.1
P58751	P58751	RELN_RAT	Reln	Reelin	1	SGTSLIFK	SGTSLIFK	2	SGTSLIFK2	122062	121483	153525
A0A8I6GF53	A0A8I6GF53	A0A8I6GF53_RAT	ENSRNOG00000067934	Ig-like domain-containing protein	1	SGTSPKPWIYDTSK	SGTSPKPWIYDTSK	2	SGTSPKPWIYDTSK2	4254.62	6581.6	5024.06
A0A8I6GF53	A0A8I6GF53	A0A8I6GF53_RAT	ENSRNOG00000067934	Ig-like domain-containing protein	1	SGTSPKPWIYDTSK	SGTSPKPWIYDTSK	3	SGTSPKPWIYDTSK3	32684.9	43397.3	43405.2
A0A8I5Y9M9	A0A8I5Y9M9	A0A8I5Y9M9_RAT	Sri	Sorcin	1	SGTVDPQELQK	SGTVDPQELQK	2	SGTVDPQELQK2	335594	336951	313093
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	SGVAYIVAPSGSTADK	SGVAYIVAPSGSTADK	2	SGVAYIVAPSGSTADK2	17490.8	22436.9	20575.5
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	SGVCIPNQR	SGVC(UniMod:4)IPNQR	2	SGVC(UniMod:4)IPNQR2	1.06793e+06	966289	1.00035e+06
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	SGVDFGSLLK	SGVDFGSLLK	2	SGVDFGSLLK2	64966.6	65716.5	65003
D4A3X7	D4A3X7	D4A3X7_RAT	Snx33	Sorting nexin	1	SGVEAFILGDVPMMAK	SGVEAFILGDVPMMAK	2	SGVEAFILGDVPMMAK2	10520.8	7256.48	10563.9
Q9EPH8	D4A5H0;Q9EPH8	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	0	SGVGNIFIK	SGVGNIFIK	2	SGVGNIFIK2	80654.8	80291.1	85985.9
G3V9N0	D4A233;A0A8I5ZSJ2;D3ZSR2;G3V9N0	G3V9N0_RAT	Pabpc4	Polyadenylate-binding protein	0	SGVGNVFIK	SGVGNVFIK	2	SGVGNVFIK2	8248.09		7898.58
G3V7J5	G3V7J5;A0A0G2K1L3	EST2E_RAT	Ces2e	Pyrethroid hydrolase Ces2e	0	SGVHTFLGIPFAK	SGVHTFLGIPFAK	3	SGVHTFLGIPFAK3	5281.14	2693.14	5020.06
G3V7W1	G3V7W1	PDCD6_RAT	Pdcd6	Programmed cell death protein 6	1	SGVISDNELQQALSNGTWTPFNPVTVR	SGVISDNELQQALSNGTWTPFNPVTVR	3	SGVISDNELQQALSNGTWTPFNPVTVR3			12993.9
A0A8I5ZT87	A0A8I5ZT87	A0A8I5ZT87_RAT	Mycbp	Myc binding protein	1	SGVLDTLTK	SGVLDTLTK	2	SGVLDTLTK2	161000	195277	188018
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	SGVLTFCVGTNQADK	SGVLTFC(UniMod:4)VGTNQADK	2	SGVLTFC(UniMod:4)VGTNQADK2	2314.98	3768.19	2208.4
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	SGVNAALDDLIDTLGECEDTNK	SGVNAALDDLIDTLGEC(UniMod:4)EDTNK	3	SGVNAALDDLIDTLGEC(UniMod:4)EDTNK3	5044.21	3380.09	7426.05
D4A3X3	D4A3X3	D4A3X3_RAT	Isg15	ISG15 ubiquitin-like modifier	1	SGVPAFQQR	SGVPAFQQR	2	SGVPAFQQR2	74825.9	60860.1	53944.8
A0A8I5Y656	A0A8I5Y656;A0A8I6G9C0	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	0	SGVPEALR	SGVPEALR	2	SGVPEALR2	330816	332420	318811
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	SGVPEALRGEVWQLLAGCHNNDHLVEK	SGVPEALRGEVWQLLAGC(UniMod:4)HNNDHLVEK	4	SGVPEALRGEVWQLLAGC(UniMod:4)HNNDHLVEK4	4010.52	6413.83	4886.89
Q9JID1	Q9JID1	PDCD4_RAT	Pdcd4	Programmed cell death protein 4	1	SGVPVLAVSLALEGK	SGVPVLAVSLALEGK	2	SGVPVLAVSLALEGK2	18339	17805	9097.09
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SGVQMNTNFFHESGLEAR	SGVQMNTNFFHESGLEAR	3	SGVQMNTNFFHESGLEAR3	1.89351e+06	2.42749e+06	2.20423e+06
D4A731	D4A731	D4A731_RAT	Ankib1	RBR-type E3 ubiquitin transferase	1	SGVQMPAPPPSGCNAWDTLPSPR	SGVQMPAPPPSGC(UniMod:4)NAWDTLPSPR	3	SGVQMPAPPPSGC(UniMod:4)NAWDTLPSPR3	6092.36	10843.6	6539.33
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	SGVQVFQQSSR	SGVQVFQQSSR	2	SGVQVFQQSSR2	10206.5	15547.9	6669.66
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	SGVSCPTVMCDIFFSLR	SGVSC(UniMod:4)PTVMC(UniMod:4)DIFFSLR	3	SGVSC(UniMod:4)PTVMC(UniMod:4)DIFFSLR3	29693.7	39223.4	28323.2
P15865	M0R7B4;P15865;A0A0G2K654;D4A3K5	H14_RAT	H1-4	Histone H1.4	0	SGVSLAALK	SGVSLAALK	2	SGVSLAALK2	28835.9	15340.6	15445.9
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	SGVSTATAITDIPSGNLAGSGEAGK	SGVSTATAITDIPSGNLAGSGEAGK	3	SGVSTATAITDIPSGNLAGSGEAGK3	253436	292094	349450
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	SGVVDLER	SGVVDLER	2	SGVVDLER2	169083	198997	186214
D4A584	D4A584	D4A584_RAT	Fes	Tyrosine-protein kinase	1	SGVVLFR	SGVVLFR	2	SGVVLFR2	10713.3	11632	8440.52
P09760	P09760	FER_RAT	Fer	Tyrosine-protein kinase Fer	1	SGVVLLNPIPK	SGVVLLNPIPK	2	SGVVLLNPIPK2	19478.3	16457.9	13488.9
D3ZYT2	D3ZYT2	D3ZYT2_RAT	Mrps5	Mitochondrial ribosomal protein S5	1	SGVVQNIGQR	SGVVQNIGQR	2	SGVVQNIGQR2	5575.84	10518	8626.15
Q68FU3	Q68FU3	ETFB_RAT	Etfb	Electron transfer flavoprotein subunit beta	1	SGVVTDGVK	SGVVTDGVK	2	SGVVTDGVK2	233452	150688	245899
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	SGWAIDPFGHSPTMTYLLK	SGWAIDPFGHSPTMTYLLK	3	SGWAIDPFGHSPTMTYLLK3	10357.5	28104.9	18932.6
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	SGWALNMK	SGWALNMK	2	SGWALNMK2	87275.4	74566.2	85250.8
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	SGWAVDPFGHSSTMPYLLR	SGWAVDPFGHSSTMPYLLR	3	SGWAVDPFGHSSTMPYLLR3	20014.6	21500.2	27190.8
B5DEY9	B5DEY9	B5DEY9_RAT	Csgalnact1	Hexosyltransferase	1	SGWDPEPK	SGWDPEPK	2	SGWDPEPK2		5117.13	
Q9ES71	Q9ES71	GNPAT_RAT	Gnpat	Dihydroxyacetone phosphate acyltransferase	1	SGYAPVEFFLEGTR	SGYAPVEFFLEGTR	2	SGYAPVEFFLEGTR2	9863.1	5901.52	3901.24
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	SGYEFADDR	SGYEFADDR	2	SGYEFADDR2	22523.4	18053.5	12020.7
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	SGYFLWTK	SGYFLWTK	2	SGYFLWTK2	22240.4	28894.4	22540.4
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	SGYFQFNK	SGYFQFNK	2	SGYFQFNK2	47118.2	52708.6	49900.3
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	SGYHYVCLR	SGYHYVC(UniMod:4)LR	2	SGYHYVC(UniMod:4)LR2	8142.36	7643.95	
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	SGYHYVCLR	SGYHYVC(UniMod:4)LR	3	SGYHYVC(UniMod:4)LR3	54618.2	60732	52080.3
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	SGYIPSGDTLGAPELLSSGR	SGYIPSGDTLGAPELLSSGR	3	SGYIPSGDTLGAPELLSSGR3	5202.38	3018.11	7321.49
A0A8I5Y7I2	A0A8I5Y7I2	A0A8I5Y7I2_RAT	Kctd12	Potassium channel tetramerization domain containing 12	1	SGYITIGYR	SGYITIGYR	2	SGYITIGYR2	138113	148717	165686
O35763	O35763	MOES_RAT	Msn	Moesin	1	SGYLAGDK	SGYLAGDK	1	SGYLAGDK1	2060.35	3567.99	3725.13
O35763	O35763	MOES_RAT	Msn	Moesin	1	SGYLAGDK	SGYLAGDK	2	SGYLAGDK2	153801	105908	179476
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	SGYLLKPEFMR	SGYLLKPEFMR	2	SGYLLKPEFMR2	11206.9	19050	13814.7
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	SGYLLKPEFMR	SGYLLKPEFMR	3	SGYLLKPEFMR3	98090	110625	115153
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	SGYLLPDTK	SGYLLPDTK	2	SGYLLPDTK2	3.90443e+06	4.43763e+06	4.16764e+06
P31977	P31977	EZRI_RAT	Ezr	Ezrin	1	SGYLSSER	SGYLSSER	2	SGYLSSER2	7970.44	9157.42	
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	SGYMSDSDLMGK	SGYMSDSDLMGK	2	SGYMSDSDLMGK2	7536.81	6231.14	8535.39
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	SGYPDIGFPLFPLSK	SGYPDIGFPLFPLSK	2	SGYPDIGFPLFPLSK2	182274	206077	171912
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	SGYPDIGFPLFPLSK	SGYPDIGFPLFPLSK	3	SGYPDIGFPLFPLSK3	5627.56	7579.97	8344.5
Q32Q06	D3ZRP6;Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	0	SGYQALPWVR	SGYQALPWVR	2	SGYQALPWVR2	264189	267210	247329
B5DFC3	B5DFC3	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	1	SGYQDMPEYENFR	SGYQDMPEYENFR	2	SGYQDMPEYENFR2	16581.1	13626.1	11983.8
B5DFC3	B5DFC3	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	1	SGYQDMPEYENFR	SGYQDMPEYENFR	3	SGYQDMPEYENFR3	1689.29	878.524	
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	SGYTFQLLR	SGYTFQLLR	2	SGYTFQLLR2	3.71542e+06	3.98513e+06	4.03883e+06
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	SGYWASHLAGR	SGYWASHLAGR	2	SGYWASHLAGR2	32338.8	44808.9	26115.1
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	SGYWASHLAGR	SGYWASHLAGR	3	SGYWASHLAGR3	103666	130788	120163
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	SHAALHILGCLDTLAAMQDLK	SHAALHILGC(UniMod:4)LDTLAAMQDLK	3	SHAALHILGC(UniMod:4)LDTLAAMQDLK3	1688.58	2390.05	
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	SHAALHILGCLDTLAAMQDLK	SHAALHILGC(UniMod:4)LDTLAAMQDLK	4	SHAALHILGC(UniMod:4)LDTLAAMQDLK4	13187.4	7825.29	10664.9
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	SHACENDQYGK	SHAC(UniMod:4)ENDQYGK	2	SHAC(UniMod:4)ENDQYGK2			1295.63
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	SHACENDQYGKPGGCSDICLLANSHK	SHAC(UniMod:4)ENDQYGKPGGC(UniMod:4)SDIC(UniMod:4)LLANSHK	3	SHAC(UniMod:4)ENDQYGKPGGC(UniMod:4)SDIC(UniMod:4)LLANSHK3	3986.41	6852.29	5003.4
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	SHACENDQYGKPGGCSDICLLANSHK	SHAC(UniMod:4)ENDQYGKPGGC(UniMod:4)SDIC(UniMod:4)LLANSHK	4	SHAC(UniMod:4)ENDQYGKPGGC(UniMod:4)SDIC(UniMod:4)LLANSHK4	47326.1	80560.5	54891.1
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	SHAEDLKDLEGVKPAVLTR	SHAEDLKDLEGVKPAVLTR	3	SHAEDLKDLEGVKPAVLTR3	11951.2	704.453	10731.1
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	SHAEDLKDLEGVKPAVLTR	SHAEDLKDLEGVKPAVLTR	4	SHAEDLKDLEGVKPAVLTR4	60496.6	73749.8	68085.5
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	SHAELTEQIR	SHAELTEQIR	3	SHAELTEQIR3	15468.2	9823.2	6206.48
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	SHAFSHV	SHAFSHV	1	SHAFSHV1	1290.11	3736.09	
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	SHAFSHV	SHAFSHV	2	SHAFSHV2	120329	118717	98697.5
D3ZER6	D3ZER6	D3ZER6_RAT	Tnpo2	Transportin 2	1	SHAIACVNQFIMDR	SHAIAC(UniMod:4)VNQFIMDR	2	SHAIAC(UniMod:4)VNQFIMDR2	2649.73	2874.9	
D3ZER6	D3ZER6	D3ZER6_RAT	Tnpo2	Transportin 2	1	SHAIACVNQFIMDR	SHAIAC(UniMod:4)VNQFIMDR	3	SHAIAC(UniMod:4)VNQFIMDR3		7315.4	3713.19
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	SHAIFTIHVCQTR	SHAIFTIHVC(UniMod:4)QTR	3	SHAIFTIHVC(UniMod:4)QTR3	5534.37	1831.06	506.884
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	SHAIFTIHVCQTR	SHAIFTIHVC(UniMod:4)QTR	4	SHAIFTIHVC(UniMod:4)QTR4	2241.75	5933.47	2933.84
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	SHAIFVITVECSEVGLDGENHIR	SHAIFVITVEC(UniMod:4)SEVGLDGENHIR	4	SHAIFVITVEC(UniMod:4)SEVGLDGENHIR4	4817.74	4564.43	2913
D3ZZ26	D3ZZ26	D3ZZ26_RAT	Ppp1r3d	Protein phosphatase 1, regulatory subunit 3D	1	SHALHMPR	SHALHMPR	2	SHALHMPR2	28372.9	27198.6	14543.3
O70631	O70631	EST2C_RAT	Ces2c	Acylcarnitine hydrolase	1	SHAPVYFYEFQHAPSYFK	SHAPVYFYEFQHAPSYFK	4	SHAPVYFYEFQHAPSYFK4	2685.17		1919.2
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	SHASASLYLLMR	SHASASLYLLMR	3	SHASASLYLLMR3	3667.71	5514.75	3085.92
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	SHATVDYSIISGNR	SHATVDYSIISGNR	3	SHATVDYSIISGNR3	2149.52		1575.85
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	SHAVACVNQFIISR	SHAVAC(UniMod:4)VNQFIISR	2	SHAVAC(UniMod:4)VNQFIISR2	6302.96	4280.79	5665.97
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	SHAVACVNQFIISR	SHAVAC(UniMod:4)VNQFIISR	3	SHAVAC(UniMod:4)VNQFIISR3	19583.8	25407	20999
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	SHAVFQIILR	SHAVFQIILR	2	SHAVFQIILR2	86786.6	76600.7	65399.7
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	SHAVFQIILR	SHAVFQIILR	3	SHAVFQIILR3	275438	245877	248426
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	SHAVFTITIESMEK	SHAVFTITIESMEK	3	SHAVFTITIESMEK3		1021.29	
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	SHAVTMFEVGK	SHAVTMFEVGK	2	SHAVTMFEVGK2	8604.68	7969.36	14601.5
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	SHAVTMFEVGK	SHAVTMFEVGK	3	SHAVTMFEVGK3	10954.7	13740.7	14098
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	SHCSPSPCFR	SHC(UniMod:4)SPSPC(UniMod:4)FR	2	SHC(UniMod:4)SPSPC(UniMod:4)FR2	11569.5	11738.3	5818.27
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	SHCSPSPCFR	SHC(UniMod:4)SPSPC(UniMod:4)FR	3	SHC(UniMod:4)SPSPC(UniMod:4)FR3	48661.4	43468.2	49054.1
D3ZQ80	D3ZQ80	D3ZQ80_RAT	Smg8	Nonsense-mediated mRNA decay factor SMG8	1	SHCTVKDPESLLVPAPLSGPR	SHC(UniMod:4)TVKDPESLLVPAPLSGPR	4	SHC(UniMod:4)TVKDPESLLVPAPLSGPR4	4231.14	5604.43	6765.3
P0CE43	P0CE43	GRB10_RAT	Grb10	Growth factor receptor-bound protein 10	1	SHCVDDNSWTLVEHHPQLGLER	SHC(UniMod:4)VDDNSWTLVEHHPQLGLER	4	SHC(UniMod:4)VDDNSWTLVEHHPQLGLER4	10689.9	15724	16169.3
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	SHDGNLLVSADDFGK	SHDGNLLVSADDFGK	2	SHDGNLLVSADDFGK2	4349.34	4353.78	5653
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	SHDGNLLVSADDFGK	SHDGNLLVSADDFGK	3	SHDGNLLVSADDFGK3	117208	84329.2	121878
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	SHDHFHIDSHTGLISLVR	SHDHFHIDSHTGLISLVR	4	SHDHFHIDSHTGLISLVR4	36354.3	28275.8	33308.4
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	SHDLKPNGGNILVTEENKEEYIR	SHDLKPNGGNILVTEENKEEYIR	4	SHDLKPNGGNILVTEENKEEYIR4	2775.79	3773.24	5025.85
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	SHDLMSGFWNACYDTLMSSGQR	SHDLMSGFWNAC(UniMod:4)YDTLMSSGQR	3	SHDLMSGFWNAC(UniMod:4)YDTLMSSGQR3	41150.9	42721	26439.3
P13668	A0A8I6GEW2;P13668	STMN1_RAT	Stmn1	Stathmin	0	SHEAEVLK	SHEAEVLK	2	SHEAEVLK2		7276.3	
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	SHEAVESLQAK	SHEAVESLQAK	2	SHEAVESLQAK2	8393.28	8115.64	8407.49
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	SHEAVESLQAK	SHEAVESLQAK	3	SHEAVESLQAK3	33685.5	20462.3	19796.6
B1H219	B1H219	B1H219_RAT	Dkk3	Dickkopf WNT signaling pathway inhibitor 3	1	SHECIIDEDCGPTR	SHEC(UniMod:4)IIDEDC(UniMod:4)GPTR	2	SHEC(UniMod:4)IIDEDC(UniMod:4)GPTR2	155425	129935	98473.5
B1H219	B1H219	B1H219_RAT	Dkk3	Dickkopf WNT signaling pathway inhibitor 3	1	SHECIIDEDCGPTR	SHEC(UniMod:4)IIDEDC(UniMod:4)GPTR	3	SHEC(UniMod:4)IIDEDC(UniMod:4)GPTR3	1.23585e+06	1.4383e+06	1.38478e+06
D4A9L2	D4A9L2	D4A9L2_RAT	Srsf1	Serine/arginine-rich splicing factor 1	1	SHEGETAYIR	SHEGETAYIR	2	SHEGETAYIR2	5264.54	2432.95	4494.72
D4A9L2	D4A9L2	D4A9L2_RAT	Srsf1	Serine/arginine-rich splicing factor 1	1	SHEGETAYIR	SHEGETAYIR	3	SHEGETAYIR3		3918.59	
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	SHEMFVTAIK	SHEMFVTAIK	2	SHEMFVTAIK2	6024.81	4183.85	3188.98
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	SHEMFVTAIK	SHEMFVTAIK	3	SHEMFVTAIK3	13760.3	9824.6	11226.9
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	SHENCDQSMREPCPMSNNVFPDNWR	SHENC(UniMod:4)DQSMREPC(UniMod:4)PMSNNVFPDNWR	4	SHENC(UniMod:4)DQSMREPC(UniMod:4)PMSNNVFPDNWR4	29619.2	40100	33327
D3ZPP3	D3ZPP3	D3ZPP3_RAT	Psd4	Pleckstrin and Sec7 domain containing 4	1	SHENCLDAASDDLLDLQR	SHENC(UniMod:4)LDAASDDLLDLQR	3	SHENC(UniMod:4)LDAASDDLLDLQR3	1109.62	3152.69	1873.09
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	SHESQLGNR	SHESQLGNR	2	SHESQLGNR2			29406.8
Q5BJY6	Q5BJY6	NAGA_RAT	Amdhd2	N-acetylglucosamine-6-phosphate deacetylase	1	SHEVIQALTAK	SHEVIQALTAK	3	SHEVIQALTAK3	7479.8	6196.8	
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	SHFDFEEEDVDK	SHFDFEEEDVDK	2	SHFDFEEEDVDK2	67481.6	60264.6	57884
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	SHFDFEEEDVDK	SHFDFEEEDVDK	3	SHFDFEEEDVDK3	209042	239928	263715
P70483	P70483	STRN_RAT	Strn	Striatin	1	SHFDGIR	SHFDGIR	2	SHFDGIR2	110552	101438	92078.7
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	SHFEANNGKLPDNK	SHFEANNGKLPDNK	3	SHFEANNGKLPDNK3	5421.69	2571.79	6193.39
P01026	P01026	CO3_RAT	C3	Complement C3	1	SHFPESWLWTIEELKEPEK	SHFPESWLWTIEELKEPEK	3	SHFPESWLWTIEELKEPEK3	629979	542552	389303
P01026	P01026	CO3_RAT	C3	Complement C3	1	SHFPESWLWTIEELKEPEK	SHFPESWLWTIEELKEPEK	4	SHFPESWLWTIEELKEPEK4	819546	794943	633698
D3ZPA1	D3ZPA1	D3ZPA1_RAT	Gcc1	GRIP and coiled-coil domain containing 1	1	SHFQAQLQQEMR	SHFQAQLQQEMR	3	SHFQAQLQQEMR3	5369.62	4510.89	5553.47
E9PSX8	E9PSX8	E9PSX8_RAT	Sipa1	Signal-induced proliferation-associated 1	1	SHFQHVFLVVR	SHFQHVFLVVR	3	SHFQHVFLVVR3	4906.66	5247.53	2829.42
F1LVL2	F1LVL2	F1LVL2_RAT	Icoslg	Inducible T-cell co-stimulator ligand	1	SHFSLDDLYVYWQIVDEAK	SHFSLDDLYVYWQIVDEAK	3	SHFSLDDLYVYWQIVDEAK3	25121.6	10670.6	5264.04
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	SHFSVIGAR	SHFSVIGAR	2	SHFSVIGAR2	15488.4	21860.1	16499.7
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	SHFTDKETGQEHELIESMPLLEWFANNYK	SHFTDKETGQEHELIESMPLLEWFANNYK	4	SHFTDKETGQEHELIESMPLLEWFANNYK4	19449.8	21688.2	7833.42
A0A0G2QC40	A0A0G2QC40	A0A0G2QC40_RAT	Mkrn1	RING-type E3 ubiquitin transferase	1	SHFWELIEER	SHFWELIEER	2	SHFWELIEER2	4027.59	4784.87	
A0A0G2QC40	A0A0G2QC40	A0A0G2QC40_RAT	Mkrn1	RING-type E3 ubiquitin transferase	1	SHFWELIEER	SHFWELIEER	3	SHFWELIEER3	4022.27	7543.66	5560.16
A0A8I6GK63	A0A8I6GK63	A0A8I6GK63_RAT	Smc4	Structural maintenance of chromosomes protein	1	SHGIDLDHNR	SHGIDLDHNR	3	SHGIDLDHNR3	11736.3	2084.96	
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	SHGLLIEQGIPK	SHGLLIEQGIPK	2	SHGLLIEQGIPK2	28680.1	17016.4	12991.9
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	SHGLLIEQGIPK	SHGLLIEQGIPK	3	SHGLLIEQGIPK3	210853	218102	223593
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	SHGLSDEHVFEVICPSIPGYGYSEASSK	SHGLSDEHVFEVIC(UniMod:4)PSIPGYGYSEASSK	4	SHGLSDEHVFEVIC(UniMod:4)PSIPGYGYSEASSK4	65599.5	74855.8	79992.2
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	SHGNTLLSAAAAALCAGEPGPK	SHGNTLLSAAAAALC(UniMod:4)AGEPGPK	3	SHGNTLLSAAAAALC(UniMod:4)AGEPGPK3	5139.5	6285.58	8447.8
P04904	P04904;P00502;P04903	GSTA3_RAT	Gsta3	Glutathione S-transferase alpha-3	0	SHGQDYLVGNR	SHGQDYLVGNR	2	SHGQDYLVGNR2	8292.98	5349.06	6332.66
P04904	P04904;P00502;P04903	GSTA3_RAT	Gsta3	Glutathione S-transferase alpha-3	0	SHGQDYLVGNR	SHGQDYLVGNR	3	SHGQDYLVGNR3	31437.7	30211.5	28683.6
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	SHGSQCGFCTPGIVMSMYTLLR	SHGSQC(UniMod:4)GFC(UniMod:4)TPGIVMSMYTLLR	3	SHGSQC(UniMod:4)GFC(UniMod:4)TPGIVMSMYTLLR3	21760.8	19458.4	23845
P32089	P32089	TXTP_RAT	Slc25a1	Tricarboxylate transport protein, mitochondrial	1	SHGVLGLYR	SHGVLGLYR	2	SHGVLGLYR2	25808	12142.6	10144.6
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	SHHAASTTTAPTPAAR	SHHAASTTTAPTPAAR	2	SHHAASTTTAPTPAAR2			2766.78
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	SHHAASTTTAPTPAAR	SHHAASTTTAPTPAAR	3	SHHAASTTTAPTPAAR3			18251.8
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	SHHAASTTTAPTPAAR	SHHAASTTTAPTPAAR	4	SHHAASTTTAPTPAAR4			8341.21
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	SHHLLALEAVERPLR	SHHLLALEAVERPLR	3	SHHLLALEAVERPLR3	3801.06		
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	SHHLLALEAVERPLR	SHHLLALEAVERPLR	4	SHHLLALEAVERPLR4	25738.2	34969.7	19014.2
Q6IE52	Q6IE52	MUG2_RAT	Mug2	Murinoglobulin-2	1	SHHPFEDEDDCLMYQPR	SHHPFEDEDDC(UniMod:4)LMYQPR	3	SHHPFEDEDDC(UniMod:4)LMYQPR3	108774	68783.3	78114.9
Q6IE52	Q6IE52	MUG2_RAT	Mug2	Murinoglobulin-2	1	SHHPFEDEDDCLMYQPR	SHHPFEDEDDC(UniMod:4)LMYQPR	4	SHHPFEDEDDC(UniMod:4)LMYQPR4	292044	262200	247620
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	SHHPYPGSQCTQR	SHHPYPGSQC(UniMod:4)TQR	2	SHHPYPGSQC(UniMod:4)TQR2			10857.1
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	SHHPYPGSQCTQR	SHHPYPGSQC(UniMod:4)TQR	3	SHHPYPGSQC(UniMod:4)TQR3			18666.9
A0A8I6GHP9	A0A8I6GHP9	A0A8I6GHP9_RAT	Vps13d	Vacuolar protein sorting 13 homolog D	1	SHHYILEPVCASALLK	SHHYILEPVC(UniMod:4)ASALLK	3	SHHYILEPVC(UniMod:4)ASALLK3	9162.22	5692.42	12504.8
P46101	P46101	DPP6_RAT	Dpp6	Dipeptidyl aminopeptidase-like protein 6	1	SHIAHWWSPDGTR	SHIAHWWSPDGTR	3	SHIAHWWSPDGTR3		5703.76	3982.68
Q9JJP9	Q9JJP9	UBQL1_RAT	Ubqln1	Ubiquilin-1	1	SHIDQLVLIFAGK	SHIDQLVLIFAGK	3	SHIDQLVLIFAGK3	16726.8	12329.6	7616.81
Q66H12	Q66H12	NAGAB_RAT	Naga	Alpha-N-acetylgalactosaminidase	1	SHIEVFK	SHIEVFK	2	SHIEVFK2	5774.21	2758.95	
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	SHIFFWTWSGNSLTR	SHIFFWTWSGNSLTR	2	SHIFFWTWSGNSLTR2	4972.34	10775.6	10911.7
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	SHIFFWTWSGNSLTR	SHIFFWTWSGNSLTR	3	SHIFFWTWSGNSLTR3	32050.3	26676.3	24429
O70595	O70595	ABCB6_RAT	Abcb6	ATP-binding cassette sub-family B member 6	1	SHIGVVPQDTVLFNDTIANNIR	SHIGVVPQDTVLFNDTIANNIR	3	SHIGVVPQDTVLFNDTIANNIR3	3541.04	8087.76	9906.82
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	SHILNEVGVHVPQQA	SHILNEVGVHVPQQA	2	SHILNEVGVHVPQQA2	4379.37	4504.48	
A0A8I5ZPY1	A0A8I5ZPY1	A0A8I5ZPY1_RAT	Golm1	Golgi membrane protein 1	1	SHILNEVGVHVPQQA	SHILNEVGVHVPQQA	3	SHILNEVGVHVPQQA3	6168.09	14500	27960.2
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	SHIMAAK	SHIMAAK	1	SHIMAAK1			43003.2
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	SHIQQLR	SHIQQLR	2	SHIQQLR2	243634	239236	229086
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	SHITALADYAMR	SHITALADYAMR	2	SHITALADYAMR2	36614.5	28740.4	28222.7
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	SHITALADYAMR	SHITALADYAMR	3	SHITALADYAMR3	66721.1	79620.8	70101.2
P15943	P15943	APLP2_RAT	Aplp2	Amyloid beta precursor like protein 2	1	SHIVIPFK	SHIVIPFK	2	SHIVIPFK2	15007.4	13679.1	12214.7
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	SHIYFWSLEGGNLSK	SHIYFWSLEGGNLSK	2	SHIYFWSLEGGNLSK2	15839.4	10999.3	10864.3
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	SHIYFWSLEGGNLSK	SHIYFWSLEGGNLSK	3	SHIYFWSLEGGNLSK3	26814	27820.5	17708.2
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	SHKPLDMSK	SHKPLDMSK	2	SHKPLDMSK2	1.58285e+07	1.70481e+07	1.45189e+07
P0C588	D4ACK7;P0C588	CNNM4_RAT	Cnnm4	Metal transporter CNNM4	0	SHLAIVQK	SHLAIVQK	2	SHLAIVQK2	2850.66		3183.01
G3V965	G3V965	G3V965_RAT	Agpat5	1-acylglycerol-3-phosphate O-acyltransferase 5	1	SHLDAIYDVTVVYEGNEK	SHLDAIYDVTVVYEGNEK	3	SHLDAIYDVTVVYEGNEK3	17798	15571.4	14454.6
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	SHLDDDGMPVYTDTIQQR	SHLDDDGMPVYTDTIQQR	3	SHLDDDGMPVYTDTIQQR3	15723.9	21825.2	19699.6
Q63737	A0A8I6A6H0;Q63737	PHLP_RAT	Pdcl	Phosducin-like protein	0	SHLDEEEEQQK	SHLDEEEEQQK	2	SHLDEEEEQQK2			6805.66
Q63737	A0A8I6A6H0;Q63737	PHLP_RAT	Pdcl	Phosducin-like protein	0	SHLDEEEEQQK	SHLDEEEEQQK	3	SHLDEEEEQQK3			9501.75
Q63678	Q63678	ZA2G_RAT	Azgp1	Zinc-alpha-2-glycoprotein	1	SHLDRTDPPTVK	SHLDRTDPPTVK	3	SHLDRTDPPTVK3	18718.1	14889.6	15488.2
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	SHLEELAAGGIPIER	SHLEELAAGGIPIER	2	SHLEELAAGGIPIER2	2902.05		1406.92
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	SHLEELAAGGIPIER	SHLEELAAGGIPIER	3	SHLEELAAGGIPIER3	14754.5	24355.2	22628.4
G3V996	G3V996	G3V996_RAT	Letmd1	LETM1 domain containing 1	1	SHLEIITHLR	SHLEIITHLR	3	SHLEIITHLR3	5748.67	6725.12	11871.3
Q5XI86	Q5XI86	Q5XI86_RAT	Ptrh2	aminoacyl-tRNA hydrolase	1	SHLGIFPQNSTSETNR	SHLGIFPQNSTSETNR	3	SHLGIFPQNSTSETNR3	4194.49	3519.71	3462.88
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	SHLGNPELSFYLFIAPPK	SHLGNPELSFYLFIAPPK	3	SHLGNPELSFYLFIAPPK3	16808.1	14246.4	13779.9
Q7TP40	Q7TP40	PCNP_RAT	Pcnp	PEST proteolytic signal-containing nuclear protein	1	SHLGNVHDQDN	SHLGNVHDQDN	2	SHLGNVHDQDN2			3665.9
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	SHLGPSLSSFSQGIPEHR	SHLGPSLSSFSQGIPEHR	3	SHLGPSLSSFSQGIPEHR3	5353.28	9291.02	2661.08
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	SHLGPSLSSFSQGIPEHR	SHLGPSLSSFSQGIPEHR	4	SHLGPSLSSFSQGIPEHR4	45714.3	38325.8	37590.5
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	SHLIVWQVMCGNE	SHLIVWQVMC(UniMod:4)GNE	2	SHLIVWQVMC(UniMod:4)GNE2	18340.3	13724.9	16395.4
Q4QQV2	Q4QQV2	DOK1_RAT	Dok1	Docking protein 1	1	SHLLAADAASSTAWVQILCR	SHLLAADAASSTAWVQILC(UniMod:4)R	3	SHLLAADAASSTAWVQILC(UniMod:4)R3	20395.5	18384.1	13591
A0A8J8XLZ3	A0A8J8XLZ3	A0A8J8XLZ3_RAT	Luc7l2	LUC7-like 2 pre-mRNA splicing factor	1	SHLLNCCPHDVLSGTR	SHLLNC(UniMod:4)C(UniMod:4)PHDVLSGTR	3	SHLLNC(UniMod:4)C(UniMod:4)PHDVLSGTR3	17719.5		
A0A8J8XLZ3	A0A8J8XLZ3	A0A8J8XLZ3_RAT	Luc7l2	LUC7-like 2 pre-mRNA splicing factor	1	SHLLNCCPHDVLSGTR	SHLLNC(UniMod:4)C(UniMod:4)PHDVLSGTR	4	SHLLNC(UniMod:4)C(UniMod:4)PHDVLSGTR4	43935.4	9870.16	2419.2
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	SHLLQLNNHQVK	SHLLQLNNHQVK	2	SHLLQLNNHQVK2	3.26895e+06	3.43504e+06	3.00581e+06
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	SHLLQLNNHQVK	SHLLQLNNHQVK	3	SHLLQLNNHQVK3	111878	152884	97373.3
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	SHLMDPQILR	SHLMDPQILR	3	SHLMDPQILR3	26848.8	27021.7	19970.6
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	SHLMELGLTAAK	SHLMELGLTAAK	3	SHLMELGLTAAK3	5544.68	1618.42	4288.3
Q3B8N7	Q3B8N7	T22D4_RAT	Tsc22d4	TSC22 domain family protein 4	1	SHLMFAVR	SHLMFAVR	2	SHLMFAVR2	77690.4	65684.9	58563.1
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	SHLMVQMGEEYYYAK	SHLMVQMGEEYYYAK	3	SHLMVQMGEEYYYAK3	3844	6448.76	4294.56
P62501	P62501;D3ZDW3	T22D1_RAT	Tsc22d1	TSC22 domain family protein 1	0	SHLMYAVR	SHLMYAVR	2	SHLMYAVR2	28910.9	23541.9	21627.4
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	SHLNSWFHHRPPGASPER	SHLNSWFHHRPPGASPER	4	SHLNSWFHHRPPGASPER4	15173.1	27483.4	16718.2
A0A8I5Y7Q0	A0A8I5Y7Q0	A0A8I5Y7Q0_RAT	Vps13b	Vacuolar protein sorting 13 homolog B	1	SHLPDPIITHLEK	SHLPDPIITHLEK	3	SHLPDPIITHLEK3		5216.63	
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	SHLQEYLNK	SHLQEYLNK	2	SHLQEYLNK2	5477.31	8493.2	2986.88
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	SHLQFFGR	SHLQFFGR	2	SHLQFFGR2	83757.7	66103.2	73425.7
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	SHLVGVKPVEADR	SHLVGVKPVEADR	3	SHLVGVKPVEADR3	19145.1	16462.8	12963.7
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	SHLYFWTLEGNSLNK	SHLYFWTLEGNSLNK	2	SHLYFWTLEGNSLNK2	20643.6	22440.1	12663.6
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	SHLYFWTLEGNSLNK	SHLYFWTLEGNSLNK	3	SHLYFWTLEGNSLNK3	151121	155732	180470
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	SHLYFWTLEGNSLNKK	SHLYFWTLEGNSLNKK	3	SHLYFWTLEGNSLNKK3	10755.9	8393.72	5378.35
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	SHLYFWTLEGNSLNKK	SHLYFWTLEGNSLNKK	4	SHLYFWTLEGNSLNKK4	10568.8	17165.8	23799.2
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	SHLYGITAVYPYCPTGR	SHLYGITAVYPYC(UniMod:4)PTGR	2	SHLYGITAVYPYC(UniMod:4)PTGR2	3906.28	6148.45	4227.18
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	SHLYGITAVYPYCPTGR	SHLYGITAVYPYC(UniMod:4)PTGR	3	SHLYGITAVYPYC(UniMod:4)PTGR3	19669.1	47542.3	23722.6
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	SHMLLLYPR	SHMLLLYPR	2	SHMLLLYPR2	4866.08	8344.23	5236.06
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	SHMVVSDTLEDFQK	SHMVVSDTLEDFQK	2	SHMVVSDTLEDFQK2	5541.18	5392.58	7340.15
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	SHMVVSDTLEDFQK	SHMVVSDTLEDFQK	3	SHMVVSDTLEDFQK3	45859.7	43942.6	46346
D3ZE05	D3ZE05	D3ZE05_RAT	Cilp2	Cartilage intermediate layer protein 2	1	SHNAGGTHEDTR	SHNAGGTHEDTR	2	SHNAGGTHEDTR2			1721.65
Q9QZH4	Q9QZH4	AAKB2_RAT	Prkab2	5'-AMP-activated protein kinase subunit beta-2	1	SHNDFVAILDLPEGEHQYK	SHNDFVAILDLPEGEHQYK	4	SHNDFVAILDLPEGEHQYK4	5954.48	7857.31	4565.1
A0A8I6AIH6	A0A8I6AIH6	A0A8I6AIH6_RAT	Suclg2	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial	1	SHNGPVLVGSPQGGVDIEEVAASSPELIFK	SHNGPVLVGSPQGGVDIEEVAASSPELIFK	4	SHNGPVLVGSPQGGVDIEEVAASSPELIFK4	4496.19	5547.93	17787.6
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	SHNIVQK	SHNIVQK	2	SHNIVQK2			37046
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	SHNLMDR	SHNLMDR	2	SHNLMDR2	18671.7	18902.8	18798.3
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	SHNSWENSDDSR	SHNSWENSDDSR	2	SHNSWENSDDSR2	5024.76	5028.72	
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	SHNSWENSDDSR	SHNSWENSDDSR	3	SHNSWENSDDSR3	18546	13655	
Q11205	Q11205	SIA4B_RAT	St3gal2	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2	1	SHNTNEVLEK	SHNTNEVLEK	3	SHNTNEVLEK3		11518.6	
A0A8I5ZU99	A0A8I5ZU99	A0A8I5ZU99_RAT	Ppm1l	Protein phosphatase, Mg2+/Mn2+ dependent, 1L	1	SHNVAVYSIQGR	SHNVAVYSIQGR	2	SHNVAVYSIQGR2	2273.31	1805.74	4126.86
A0A8I5ZU99	A0A8I5ZU99	A0A8I5ZU99_RAT	Ppm1l	Protein phosphatase, Mg2+/Mn2+ dependent, 1L	1	SHNVAVYSIQGR	SHNVAVYSIQGR	3	SHNVAVYSIQGR3	7561.33	4976.54	15292.1
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	SHPDLLQLSR	SHPDLLQLSR	2	SHPDLLQLSR2	265231	355562	325582
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	SHPDLLQLSR	SHPDLLQLSR	3	SHPDLLQLSR3	364301	370273	343845
Q6AYT7	Q6AYT7	ABD12_RAT	Abhd12	Lysophosphatidylserine lipase ABHD12	1	SHPFSVIYR	SHPFSVIYR	2	SHPFSVIYR2	22773	24331.9	24763.2
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	SHPGGGPTVSSPGR	SHPGGGPTVSSPGR	3	SHPGGGPTVSSPGR3	14726.9	11682.4	25795.7
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	SHPGPVVHISDNPMDEGK	SHPGPVVHISDNPMDEGK	3	SHPGPVVHISDNPMDEGK3	60477.6	67563.5	68572.4
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	SHPGPVVHISDNPMDEGK	SHPGPVVHISDNPMDEGK	4	SHPGPVVHISDNPMDEGK4	24652.7	25156.8	31439.3
D4AAT1	D4AAT1	D4AAT1_RAT	Adamts8	ADAM metallopeptidase with thrombospondin type 1 motif, 8	1	SHPGVQNDGSYLALK	SHPGVQNDGSYLALK	3	SHPGVQNDGSYLALK3	2550.11	1665.74	
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	SHPLDPIDTK	SHPLDPIDTK	2	SHPLDPIDTK2	35598.1	33003	24252
A0A0G2JZC4	A0A0G2JZC4	A0A0G2JZC4_RAT	Sema6d	Semaphorin 6D	1	SHPLMDSAVPPIADEPWFTK	SHPLMDSAVPPIADEPWFTK	3	SHPLMDSAVPPIADEPWFTK3	15358.3	18544.2	26504
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	SHPSLQSEQIGIVK	SHPSLQSEQIGIVK	3	SHPSLQSEQIGIVK3	7615.08	7967.2	6481.95
Q4FZV0	Q4FZV0	MANBA_RAT	Manba	Beta-mannosidase	1	SHPSVIIWSGNNENEVALR	SHPSVIIWSGNNENEVALR	3	SHPSVIIWSGNNENEVALR3	10313.5	7284.42	7105.24
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	SHPVPEGGLLQIGQEK	SHPVPEGGLLQIGQEK	2	SHPVPEGGLLQIGQEK2	85444.6	71036.8	69958.2
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	SHPVPEGGLLQIGQEK	SHPVPEGGLLQIGQEK	3	SHPVPEGGLLQIGQEK3	336638	372285	390090
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	SHQDATDPEALWGVHR	SHQDATDPEALWGVHR	2	SHQDATDPEALWGVHR2	15487.3	11005.3	12704.1
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	SHQDATDPEALWGVHR	SHQDATDPEALWGVHR	3	SHQDATDPEALWGVHR3	383857	344085	317743
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	SHQDATDPEALWGVHR	SHQDATDPEALWGVHR	4	SHQDATDPEALWGVHR4	315769	326705	311138
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	SHQELISQLLQSYMQLLLPGDEK	SHQELISQLLQSYMQLLLPGDEK	3	SHQELISQLLQSYMQLLLPGDEK3	10766		
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	SHQGVMEAMK	SHQGVMEAMK	2	SHQGVMEAMK2	12372.1	11840.9	9594.22
A0A8I6AE33	A0A8I6AE33	A0A8I6AE33_RAT	Wdr37	WD repeat domain 37	1	SHQGVVIAADWLVGGK	SHQGVVIAADWLVGGK	3	SHQGVVIAADWLVGGK3	5209.82	6347.8	4840.47
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	SHQNASSIIK	SHQNASSIIK	2	SHQNASSIIK2	2262.43	3351.97	5176.74
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	SHQVDYDLMVK	SHQVDYDLMVK	2	SHQVDYDLMVK2	15705.5	16308.8	7917.35
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	SHQVDYDLMVK	SHQVDYDLMVK	3	SHQVDYDLMVK3	17156.9	12794.9	13329
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	SHQVLLQSQLAEK	SHQVLLQSQLAEK	2	SHQVLLQSQLAEK2	22803.1	17131.7	9306.34
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	SHQVLLQSQLAEK	SHQVLLQSQLAEK	3	SHQVLLQSQLAEK3	106185	111654	103077
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	SHQVLLQSQLAEKDTVIENLR	SHQVLLQSQLAEKDTVIENLR	3	SHQVLLQSQLAEKDTVIENLR3	13360	9806.57	12922.4
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	SHQVLLQSQLAEKDTVIENLR	SHQVLLQSQLAEKDTVIENLR	4	SHQVLLQSQLAEKDTVIENLR4	32899.6	45563.3	46264.9
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	SHQWFGASVR	SHQWFGASVR	2	SHQWFGASVR2	128303	125025	99553.7
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	SHQWFGASVR	SHQWFGASVR	3	SHQWFGASVR3	426164	341508	362950
F1LM81	F1LM81	TM1L1_RAT	Tom1l1	TOM1-like protein 1	1	SHRDPYATSLGHLIEK	SHRDPYATSLGHLIEK	4	SHRDPYATSLGHLIEK4	5577.87	10762.9	5056.8
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	SHSENVSQHPLHVEVLHSVVMAHQK	SHSENVSQHPLHVEVLHSVVMAHQK	3	SHSENVSQHPLHVEVLHSVVMAHQK3	708.306		
M0RCS2	M0RCS2	M0RCS2_RAT	Tbl2	Transducin (beta)-like 2	1	SHSGNISCMDFSSNGK	SHSGNISC(UniMod:4)MDFSSNGK	3	SHSGNISC(UniMod:4)MDFSSNGK3	956.822	5208.42	5655.06
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	SHSIFLINVK	SHSIFLINVK	2	SHSIFLINVK2	66488.2	55217.7	55402.5
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	SHSIFLINVK	SHSIFLINVK	3	SHSIFLINVK3	106219	113241	110997
P58751	P58751	RELN_RAT	Reln	Reelin	1	SHSILLQSSINGGVTWR	SHSILLQSSINGGVTWR	3	SHSILLQSSINGGVTWR3	5579.65	4137.6	7910.79
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	SHSITNMETGGLK	SHSITNMETGGLK	3	SHSITNMETGGLK3	6206.22	9531.65	8907.34
Q66H86	Q66H86	OLFL1_RAT	Olfml1	Olfactomedin-like protein 1	1	SHSMIHYNPR	SHSMIHYNPR	3	SHSMIHYNPR3	42521.6	44337.6	45554.2
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	SHSPSMSQSGSQLR	SHSPSMSQSGSQLR	3	SHSPSMSQSGSQLR3	8986.71	5029.61	8327.72
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	SHSSAQFLIGDQEPWAFR	SHSSAQFLIGDQEPWAFR	3	SHSSAQFLIGDQEPWAFR3	30808.2	22953.1	27285.9
D3ZMA2	D3ZMA2	D3ZMA2_RAT	Mtmr14	Myotubularin related protein 14	1	SHSSSPQSMLWSR	SHSSSPQSMLWSR	3	SHSSSPQSMLWSR3	7067.32	10775.8	5130.09
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	SHSTIASLGLAFPSQNGSAVASR	SHSTIASLGLAFPSQNGSAVASR	3	SHSTIASLGLAFPSQNGSAVASR3		3990.06	
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	SHSWGIVLPLGELEGK	SHSWGIVLPLGELEGK	2	SHSWGIVLPLGELEGK2	22602.9	25398.8	23117.3
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	SHSWGIVLPLGELEGK	SHSWGIVLPLGELEGK	3	SHSWGIVLPLGELEGK3	115027	111009	122064
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	SHSWGIVLPLGELEGKK	SHSWGIVLPLGELEGKK	3	SHSWGIVLPLGELEGKK3	27800.5	28811.9	20425.2
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	SHSWGIVLPLGELEGKK	SHSWGIVLPLGELEGKK	4	SHSWGIVLPLGELEGKK4	35705.1	46105.7	36530.4
D4A746	D4A746	D4A746_RAT	Gmppb	GDP-mannose pyrophosphorylase B	1	SHSWLESCIVGWR	SHSWLESC(UniMod:4)IVGWR	3	SHSWLESC(UniMod:4)IVGWR3	9017.97	11306.8	10138.5
G3V996	G3V996	G3V996_RAT	Letmd1	LETM1 domain containing 1	1	SHTAVIHQLDR	SHTAVIHQLDR	3	SHTAVIHQLDR3	7086.5	7359.35	5290.57
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	SHTGDLSPNVQSR	SHTGDLSPNVQSR	2	SHTGDLSPNVQSR2	8622.16	9554.83	4413.76
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	SHTGDLSPNVQSR	SHTGDLSPNVQSR	3	SHTGDLSPNVQSR3	70967.8	61154.1	76194.1
A0A8I6ABQ2	A0A8I6ABQ2	A0A8I6ABQ2_RAT	Bcl2l13	BCL2 like 13	1	SHTGEAIAAR	SHTGEAIAAR	2	SHTGEAIAAR2	9082.84		23044.7
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	SHTVAAQGGINAALGNMEEDNWR	SHTVAAQGGINAALGNMEEDNWR	3	SHTVAAQGGINAALGNMEEDNWR3			2710.71
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	SHTVAEASYAR	SHTVAEASYAR	2	SHTVAEASYAR2	14468.9	13190.5	16666.6
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	SHTVAEASYAR	SHTVAEASYAR	3	SHTVAEASYAR3	41272.3	47596.9	43596.6
Q704S8	Q704S8	CACP_RAT	Crat	Carnitine O-acetyltransferase	1	SHVAGQMLHGGGSK	SHVAGQMLHGGGSK	2	SHVAGQMLHGGGSK2	5862.17	3356.72	2338.06
Q704S8	Q704S8	CACP_RAT	Crat	Carnitine O-acetyltransferase	1	SHVAGQMLHGGGSK	SHVAGQMLHGGGSK	3	SHVAGQMLHGGGSK3	5785.75	8275.64	2346.87
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	SHVEDGDVAGSPAVPPAEQDPVK	SHVEDGDVAGSPAVPPAEQDPVK	3	SHVEDGDVAGSPAVPPAEQDPVK3	67771.6	51740.1	59637.3
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	SHVEELPR	SHVEELPR	2	SHVEELPR2	39171.5	47200	44896.5
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	SHVGLVYSQQINEVLDQLTNLNGR	SHVGLVYSQQINEVLDQLTNLNGR	3	SHVGLVYSQQINEVLDQLTNLNGR3	2246.28	3651.82	1876.13
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	SHVHFWNWSGGTGVPGNGILAR	SHVHFWNWSGGTGVPGNGILAR	3	SHVHFWNWSGGTGVPGNGILAR3	4846.98	4495.02	5169.8
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	SHVHFWNWSGGTGVPGNGILAR	SHVHFWNWSGGTGVPGNGILAR	4	SHVHFWNWSGGTGVPGNGILAR4	9617.53	13219.7	8584.21
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	SHVLELYCESQCDSHLK	SHVLELYC(UniMod:4)ESQC(UniMod:4)DSHLK	3	SHVLELYC(UniMod:4)ESQC(UniMod:4)DSHLK3	31689.7	24373.4	18074.2
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	SHVLELYCESQCDSHLK	SHVLELYC(UniMod:4)ESQC(UniMod:4)DSHLK	4	SHVLELYC(UniMod:4)ESQC(UniMod:4)DSHLK4	15623	14661	21759.9
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	SHVLVGLEDGK	SHVLVGLEDGK	2	SHVLVGLEDGK2	87083.1	86017.8	58766.6
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	SHVLVGLEDGK	SHVLVGLEDGK	3	SHVLVGLEDGK3	102250	131822	87031.4
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	SHVVVITR	SHVVVITR	2	SHVVVITR2	12732	5106.67	12657.1
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	SHWAQQLVTEFQSR	SHWAQQLVTEFQSR	2	SHWAQQLVTEFQSR2	4545.3	2982.74	2450.26
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	SHWAQQLVTEFQSR	SHWAQQLVTEFQSR	3	SHWAQQLVTEFQSR3	35379.2	37917	42023.1
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	SHWATEAILVSDTGVK	SHWATEAILVSDTGVK	3	SHWATEAILVSDTGVK3	15231	10877.8	9538.5
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	SHWEDLNK	SHWEDLNK	2	SHWEDLNK2	8423.37	10046.9	8157.06
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	SHWEDLNKK	SHWEDLNKK	3	SHWEDLNKK3	13324.9	10546	18454.6
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	SHWLGPNYTK	SHWLGPNYTK	2	SHWLGPNYTK2	41688.1	51346	56319.5
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	SHWLGPNYTK	SHWLGPNYTK	3	SHWLGPNYTK3	99145.3	114121	95655.8
P80432	P80432;A0A8I6ADD5;A0A8I6B572	COX7C_RAT	Cox7c	Cytochrome c oxidase subunit 7C, mitochondrial	0	SHYEEGPGK	SHYEEGPGK	2	SHYEEGPGK2			7718.92
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	SHYMLQLEAYDGGSPPR	SHYMLQLEAYDGGSPPR	3	SHYMLQLEAYDGGSPPR3	15350.8	12031.8	4954.77
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	SHYPFEDEDGCVIYRPR	SHYPFEDEDGC(UniMod:4)VIYRPR	3	SHYPFEDEDGC(UniMod:4)VIYRPR3	499981	497391	425411
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	SHYPFEDEDGCVIYRPR	SHYPFEDEDGC(UniMod:4)VIYRPR	4	SHYPFEDEDGC(UniMod:4)VIYRPR4	663813	665096	585162
Q64537	Q64537	CPNS1_RAT	Capns1	Calpain small subunit 1	1	SHYSNIEANESEEER	SHYSNIEANESEEER	2	SHYSNIEANESEEER2	67048.7	88298	69431
Q64537	Q64537	CPNS1_RAT	Capns1	Calpain small subunit 1	1	SHYSNIEANESEEER	SHYSNIEANESEEER	3	SHYSNIEANESEEER3	624826	771923	29085.9
Q64537	Q64537	CPNS1_RAT	Capns1	Calpain small subunit 1	1	SHYSNIEANESEEERQFR	SHYSNIEANESEEERQFR	4	SHYSNIEANESEEERQFR4	9485.55	17740.2	8987.11
D4ADT5	D4ADT5	D4ADT5_RAT	Rig1	RNA helicase	1	SHYTVLGDAFK	SHYTVLGDAFK	2	SHYTVLGDAFK2	1972.12	1152.21	3856.59
D4ADT5	D4ADT5	D4ADT5_RAT	Rig1	RNA helicase	1	SHYTVLGDAFK	SHYTVLGDAFK	3	SHYTVLGDAFK3		8687.96	6649.47
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	SHYVLYGLVAAMQPR	SHYVLYGLVAAMQPR	3	SHYVLYGLVAAMQPR3	44738.9	42529.6	41000.2
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	SIAAATSALVK	SIAAATSALVK	2	SIAAATSALVK2	2.29075e+06	2.1568e+06	2.18546e+06
A0A0G2K528	A0A0G2K528	A0A0G2K528_RAT	Stx16	Syntaxin 16	1	SIAAELDELADDR	SIAAELDELADDR	2	SIAAELDELADDR2	9318.58	8017.37	7923.97
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	SIAATDHEPTDAR	SIAATDHEPTDAR	2	SIAATDHEPTDAR2	1672.26		
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	SIAATDHEPTDAR	SIAATDHEPTDAR	3	SIAATDHEPTDAR3	82720.9	64597	51208.1
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	SIAATDHEPTDARK	SIAATDHEPTDARK	2	SIAATDHEPTDARK2		653.572	1803.08
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	SIAATDHEPTDARK	SIAATDHEPTDARK	3	SIAATDHEPTDARK3	10202	10844.4	8761.66
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	SIACSPK	SIAC(UniMod:4)SPK	2	SIAC(UniMod:4)SPK2	12319.7		
D3ZER6	D3ZER6	D3ZER6_RAT	Tnpo2	Transportin 2	1	SIACWTLSR	SIAC(UniMod:4)WTLSR	2	SIAC(UniMod:4)WTLSR2	103531	114816	118379
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	SIAEEQYSDLEK	SIAEEQYSDLEK	2	SIAEEQYSDLEK2	23805.8	18574.7	31525.6
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	SIAEEQYSDLEKEK	SIAEEQYSDLEKEK	2	SIAEEQYSDLEKEK2	6597.24	12103.7	16334.8
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	SIAEEQYSDLEKEK	SIAEEQYSDLEKEK	3	SIAEEQYSDLEKEK3	40791.1	46768.4	41798
F7FFW7	F7FFW7	F7FFW7_RAT	Atp6v0d1	ATPase H+ transporting V0 subunit D1	1	SIAELVPK	SIAELVPK	2	SIAELVPK2	79928.8	86194.2	75726.3
Q5XIG8	Q5XIG8	STRAP_RAT	Strap	Serine-threonine kinase receptor-associated protein	1	SIAFHSAVSLEPIK	SIAFHSAVSLEPIK	3	SIAFHSAVSLEPIK3	42126.6	26625.1	34601.9
Q05701	Q05701	BPIB3_RAT	Bpifb3	BPI fold-containing family B member 3	1	SIAGDVIDFPKPR	SIAGDVIDFPKPR	3	SIAGDVIDFPKPR3	8374.73	4056.99	8593.88
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	SIALDSEPKPFIDVSVITR	SIALDSEPKPFIDVSVITR	3	SIALDSEPKPFIDVSVITR3	7160.37	6910.29	3963.22
A0A0G2KAU4	A0A0G2KAU4	A0A0G2KAU4_RAT	Rasgrp3	RAS guanyl releasing protein 3	1	SIALFNGISK	SIALFNGISK	2	SIALFNGISK2	20330.2	18781.6	24140.3
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	SIAMAAR	SIAMAAR	1	SIAMAAR1	30720.7	29685.2	20656.7
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	SIAQPTLHSFDAAQSR	SIAQPTLHSFDAAQSR	2	SIAQPTLHSFDAAQSR2	39126.9	41436.6	44587.5
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	SIAQPTLHSFDAAQSR	SIAQPTLHSFDAAQSR	3	SIAQPTLHSFDAAQSR3	788497	778686	792627
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	SIAQYWLGCPTSEK	SIAQYWLGC(UniMod:4)PTSEK	2	SIAQYWLGC(UniMod:4)PTSEK2	187156	214087	228875
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	SIAQYWLGCPTSEK	SIAQYWLGC(UniMod:4)PTSEK	3	SIAQYWLGC(UniMod:4)PTSEK3	1.49412e+07	2.02548e+07	1.83086e+07
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	SIASAIVNELKK	SIASAIVNELKK	2	SIASAIVNELKK2	3815.8	7142.4	
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	SIASAIVNELKK	SIASAIVNELKK	3	SIASAIVNELKK3	13905.2	19117.6	15285.1
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	SIASAVEVCQCPPGYSGSSCEACWPR	SIASAVEVC(UniMod:4)QC(UniMod:4)PPGYSGSSC(UniMod:4)EAC(UniMod:4)WPR	3	SIASAVEVC(UniMod:4)QC(UniMod:4)PPGYSGSSC(UniMod:4)EAC(UniMod:4)WPR3	5850.66	18085.5	3774.42
P18614	P18614	ITA1_RAT	Itga1	Integrin alpha-1	1	SIASEPTEK	SIASEPTEK	2	SIASEPTEK2	24635.6	24356	23642.3
Q4AEF8	Q4AEF8;D4ABY2	COPG1_RAT	Copg1	Coatomer subunit gamma-1	0	SIATLAITTLLK	SIATLAITTLLK	2	SIATLAITTLLK2	175243	211214	174526
Q4AEF8	Q4AEF8;D4ABY2	COPG1_RAT	Copg1	Coatomer subunit gamma-1	0	SIATLAITTLLK	SIATLAITTLLK	3	SIATLAITTLLK3	4233.27	7189.18	8839.72
Q9R1N3	Q9R1N3	S4A7_RAT	Slc4a7	Sodium bicarbonate cotransporter 3	1	SIATLMTDEIFHDVAYK	SIATLMTDEIFHDVAYK	2	SIATLMTDEIFHDVAYK2	2119.29		4159.01
Q9R1N3	Q9R1N3	S4A7_RAT	Slc4a7	Sodium bicarbonate cotransporter 3	1	SIATLMTDEIFHDVAYK	SIATLMTDEIFHDVAYK	3	SIATLMTDEIFHDVAYK3	10913.2	2356.14	4022.46
A0A8I6GBQ0	A0A8I6GBQ0	A0A8I6GBQ0_RAT	Stk26	Protein kinase domain-containing protein	1	SIAVAEAACPGITDK	SIAVAEAAC(UniMod:4)PGITDK	2	SIAVAEAAC(UniMod:4)PGITDK2	137328	124975	128138
A0A8I6GBQ0	A0A8I6GBQ0	A0A8I6GBQ0_RAT	Stk26	Protein kinase domain-containing protein	1	SIAVAEAACPGITDK	SIAVAEAAC(UniMod:4)PGITDK	3	SIAVAEAAC(UniMod:4)PGITDK3	8436.81	3972.27	6835.05
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	SIAVTRPNNLVHFTESK	SIAVTRPNNLVHFTESK	3	SIAVTRPNNLVHFTESK3	36020.7	27977.6	21055.8
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	SIAVTRPNNLVHFTESK	SIAVTRPNNLVHFTESK	4	SIAVTRPNNLVHFTESK4	27302.3	25547.6	30464.5
O55004	O55004	RNAS4_RAT	Rnase4	Ribonuclease 4	1	SICDTANIPCK	SIC(UniMod:4)DTANIPC(UniMod:4)K	2	SIC(UniMod:4)DTANIPC(UniMod:4)K2	22712.8	29357.3	15566.4
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	SICEEFSK	SIC(UniMod:4)EEFSK	2	SIC(UniMod:4)EEFSK2	1.09331e+07	1.0692e+07	9.68917e+06
B2RZ17	B2RZ17	FBXW2_RAT	Fbxw2	F-box/WD repeat-containing protein 2	1	SICLQPR	SIC(UniMod:4)LQPR	2	SIC(UniMod:4)LQPR2	12070.5	11076.4	9484.7
P68255	P68255	1433T_RAT	Ywhaq	14-3-3 protein theta	1	SICTTVLELLDK	SIC(UniMod:4)TTVLELLDK	2	SIC(UniMod:4)TTVLELLDK2	179451	238660	129375
P68255	P68255	1433T_RAT	Ywhaq	14-3-3 protein theta	1	SICTTVLELLDK	SIC(UniMod:4)TTVLELLDK	3	SIC(UniMod:4)TTVLELLDK3	8625.69	10991.6	12008.1
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	SIDDDVDESEEAVYR	SIDDDVDESEEAVYR	2	SIDDDVDESEEAVYR2	7037.97	10606.9	4784.6
Q5XIN4	Q5XIN4	Q5XIN4_RAT	Mtmr9	Myotubularin related protein 9	1	SIDDEALR	SIDDEALR	2	SIDDEALR2	76971.3	80154.2	82395.5
Q5XIN4	Q5XIN4	Q5XIN4_RAT	Mtmr9	Myotubularin related protein 9	1	SIDDEALRK	SIDDEALRK	2	SIDDEALRK2	4059.53	1978.67	1852.87
P54645	P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	1	SIDDEITEAK	SIDDEITEAK	2	SIDDEITEAK2	47543.8	62534.1	56842.8
Q09137	Q09137	AAPK2_RAT	Prkaa2	5'-AMP-activated protein kinase catalytic subunit alpha-2	1	SIDDEVVEQR	SIDDEVVEQR	2	SIDDEVVEQR2	23214.9	24523.3	25700.7
P04692	P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	1	SIDDLEDELYAQK	SIDDLEDELYAQK	2	SIDDLEDELYAQK2	35134.1	24368.7	22357.1
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	SIDDLLK	SIDDLLK	1	SIDDLLK1	41198.9	38769.3	54009.4
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	SIDDLLK	SIDDLLK	2	SIDDLLK2	2.48529e+06	2.69209e+06	2.71509e+06
Q5HZB0	Q5HZB0	PORIM_RAT	Tmem123	Porimin	1	SIDEHDAII	SIDEHDAII	2	SIDEHDAII2	291088	321902	348314
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	SIDEMNNAWENLNR	SIDEMNNAWENLNR	2	SIDEMNNAWENLNR2	13423.3	18573.8	19679.9
D4A5K6	D4A5K6	D4A5K6_RAT	Zmpste24	CAAX prenyl protease	1	SIDFPLTK	SIDFPLTK	2	SIDFPLTK2	138842	142810	125031
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	SIDKPFR	SIDKPFR	2	SIDKPFR2	8573.58	7769.72	2470.29
O35826	O35826	GLCNE_RAT	Gne	Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase	1	SIDLQEPLQK	SIDLQEPLQK	2	SIDLQEPLQK2	1916.38	1584.92	4242.56
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	SIDLVLAASR	SIDLVLAASR	2	SIDLVLAASR2	17236.9	11227.9	8070.67
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	SIDNSIVLPLTLGSPK	SIDNSIVLPLTLGSPK	2	SIDNSIVLPLTLGSPK2	18106.5	13733.6	14447.4
Q32KJ5	Q32KJ5	Q32KJ5_RAT	Gns	N-acetylglucosamine-6-sulfatase	1	SIDPELLGK	SIDPELLGK	2	SIDPELLGK2	69711.9	68266.6	89558.7
D3ZWB1	D3ZWB1	D3ZWB1_RAT	Lsm1	U6 snRNA-associated Sm-like protein LSm1	1	SIDQFANLVLHQTVER	SIDQFANLVLHQTVER	3	SIDQFANLVLHQTVER3	31048.7	30955.4	26981.8
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	SIDQLRK	SIDQLRK	2	SIDQLRK2	13445.9	16024.6	24260.7
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	SIDSSPEVINYLGNK	SIDSSPEVINYLGNK	2	SIDSSPEVINYLGNK2	2734.37	6214.97	
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	SIDTGMGLER	SIDTGMGLER	2	SIDTGMGLER2	24125.7	32812.4	18206.9
D3ZCI3	D3ZCI3	D3ZCI3_RAT	Arhgap30	Rho GTPase activating protein 30	1	SIDVETEGMR	SIDVETEGMR	2	SIDVETEGMR2	4309.01		5173.73
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	SIEALLEAGQAQDSQASR	SIEALLEAGQAQDSQASR	2	SIEALLEAGQAQDSQASR2	19982.5	18936.8	20276.9
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	SIEALLEAGQAQDSQASR	SIEALLEAGQAQDSQASR	3	SIEALLEAGQAQDSQASR3	22325.1	15240.7	22067
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	SIEDQLQPNSASGSGALEHDPSSIYLR	SIEDQLQPNSASGSGALEHDPSSIYLR	3	SIEDQLQPNSASGSGALEHDPSSIYLR3	23205	36983.3	36240.7
D3ZQJ3	D3ZQJ3	D3ZQJ3_RAT	Gigyf1	GRB10 interacting GYF protein 1	1	SIEEGDGAFGR	SIEEGDGAFGR	2	SIEEGDGAFGR2	5430.65	2267.86	7192.63
E9PU10	E9PU10	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	1	SIEEIAER	SIEEIAER	2	SIEEIAER2	126875	119170	127041
E9PU10	E9PU10	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	1	SIEEIAERLETPLEDIK	SIEEIAERLETPLEDIK	3	SIEEIAERLETPLEDIK3	11250.1	16426.5	22942.5
Q5XIP6	Q5XIP6	FEN1_RAT	Fen1	Flap endonuclease 1	1	SIEEIVR	SIEEIVR	2	SIEEIVR2			36811.3
Q498T9	Q498T9	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	1	SIEEIVSFQHLR	SIEEIVSFQHLR	2	SIEEIVSFQHLR2	6561.12	5247.44	3521.51
Q498T9	Q498T9	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	1	SIEEIVSFQHLR	SIEEIVSFQHLR	3	SIEEIVSFQHLR3	14103.2	18708.9	15510.6
Q4V794	Q4V794	Q4V794_RAT	Vps37a	VPS37A subunit of ESCRT-I	1	SIEELAR	SIEELAR	2	SIEELAR2	31767.4	24214.1	33799.6
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	SIEELDCSFNEIEALPSSIGQLTNIR	SIEELDC(UniMod:4)SFNEIEALPSSIGQLTNIR	3	SIEELDC(UniMod:4)SFNEIEALPSSIGQLTNIR3	50480.7	47171.2	55543.9
D3ZD73	D3ZD73	D3ZD73_RAT	Ddx6	DEAD-box helicase 6	1	SIEEQLGTEIKPIPSNIDK	SIEEQLGTEIKPIPSNIDK	3	SIEEQLGTEIKPIPSNIDK3	12986.5	6670.03	14163.1
Q9QZ81	Q9QZ81	AGO2_RAT	Ago2	Protein argonaute-2	1	SIEEQQKPLTDSQR	SIEEQQKPLTDSQR	3	SIEEQQKPLTDSQR3	12128.9	12674	11748.8
A0A0G2K4E8	A0A0G2JVX9;A0A0G2K4E8;F1LNT3	A0A0G2K4E8_RAT	R3hdm2	R3H domain containing 2	0	SIEEREEEYQR	SIEEREEEYQR	3	SIEEREEEYQR3	23049.4	23447.1	
Q63615	Q63615	VP33A_RAT	Vps33a	Vacuolar protein sorting-associated protein 33A	1	SIEEVLR	SIEEVLR	2	SIEEVLR2	44248	29793.2	
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	SIEGELSSAIHMTK	SIEGELSSAIHMTK	3	SIEGELSSAIHMTK3	26560.3	17433.3	18430.5
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	SIEGLTPNK	SIEGLTPNK	2	SIEGLTPNK2	82692.1	70727.6	79635.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SIELAHR	SIELAHR	2	SIELAHR2	253859	289822	254628
D3ZKU7	D3ZKU7	BL1S1_RAT	Bloc1s1	Biogenesis of lysosome-related organelles complex 1 subunit 1	1	SIELDMR	SIELDMR	2	SIELDMR2	23479.7	25161.7	21526.3
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	SIELEHFEER	SIELEHFEER	2	SIELEHFEER2	7372.99	2647.37	3848.02
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	SIELEHFEER	SIELEHFEER	3	SIELEHFEER3	47325.4	53442.8	56583.6
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	SIELEHFEERDK	SIELEHFEERDK	3	SIELEHFEERDK3	10784.8	21803.5	11609.2
E9PU42	E9PU42	E9PU42_RAT	Vps26c	VPS26 endosomal protein sorting factor C	1	SIELQLVR	SIELQLVR	2	SIELQLVR2			29561
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	SIEPLTCGR	SIEPLTC(UniMod:4)GR	2	SIEPLTC(UniMod:4)GR2	21651	31690.4	19635.3
D3ZME7	D3ZME7	D3ZME7_RAT	Hscb	HscB mitochondrial iron-sulfur cluster co-chaperone	1	SIEPQCWNCGR	SIEPQC(UniMod:4)WNC(UniMod:4)GR	2	SIEPQC(UniMod:4)WNC(UniMod:4)GR2	8529.55	6566.52	8093.66
P21913	P21913	SDHB_RAT	Sdhb	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial	1	SIEPYLK	SIEPYLK	2	SIEPYLK2	89933.5	113742	63552.5
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	SIEQDAVNTFTK	SIEQDAVNTFTK	2	SIEQDAVNTFTK2	11027.7	8854.15	13985.3
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	SIEQMDTDHK	SIEQMDTDHK	3	SIEQMDTDHK3	4162.09	4395.98	7158.66
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	SIEQPILLK	SIEQPILLK	2	SIEQPILLK2	724932	772184	806878
Q5QJC9	Q5QJC9	BAG5_RAT	Bag5	BAG family molecular chaperone regulator 5	1	SIEQQVVGFSGLSDDK	SIEQQVVGFSGLSDDK	2	SIEQQVVGFSGLSDDK2	3073.78		3025.51
Q5QJC9	Q5QJC9	BAG5_RAT	Bag5	BAG family molecular chaperone regulator 5	1	SIEQQVVGFSGLSDDKNYK	SIEQQVVGFSGLSDDKNYK	3	SIEQQVVGFSGLSDDKNYK3	8881.82	5340.61	2464.83
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	SIESTLDDLFR	SIESTLDDLFR	2	SIESTLDDLFR2	7272.72	22433	8544.28
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	SIETIQK	SIETIQK	2	SIETIQK2	37332.2	32310.9	34940.7
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	SIEVFGQFQGK	SIEVFGQFQGK	2	SIEVFGQFQGK2	1.8523e+06	1.2858e+06	1.36468e+06
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	SIEVPFKPAR	SIEVPFKPAR	3	SIEVPFKPAR3	39206.2	42077.4	35048
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	SIEVQLLR	SIEVQLLR	2	SIEVQLLR2	29143.3	27208.6	
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	SIEYSPQLEDANAK	SIEYSPQLEDANAK	2	SIEYSPQLEDANAK2	517142	555498	521426
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	SIFANVEAK	SIFANVEAK	2	SIFANVEAK2	41883.4	54062	43232.4
G3V6Q3	G3V6Q3	G3V6Q3_RAT	Wdr13	Uncharacterized protein	1	SIFCPLMSFR	SIFC(UniMod:4)PLMSFR	2	SIFC(UniMod:4)PLMSFR2	15065.2	23531.6	27020.7
A0A8I5ZMX2	A0A8I5ZMX2	A0A8I5ZMX2_RAT	Adamts3	ADAM metallopeptidase with thrombospondin type 1, motif 3	1	SIFCQMEVLAR	SIFC(UniMod:4)QMEVLAR	2	SIFC(UniMod:4)QMEVLAR2	11704.6	4097.58	13413.3
A0A8I6AE91	A0A8I6AE91	A0A8I6AE91_RAT	Gga2	Golgi associated, gamma adaptin ear containing, ARF binding protein 2	1	SIFDADEEK	SIFDADEEK	2	SIFDADEEK2	26361.4	22707.9	15032.1
A0A8I6AE91	A0A8I6AE91	A0A8I6AE91_RAT	Gga2	Golgi associated, gamma adaptin ear containing, ARF binding protein 2	1	SIFDADEEKSK	SIFDADEEKSK	3	SIFDADEEKSK3	7844.53	1223.01	1187.68
M0R9B9	M0R9B9	M0R9B9_RAT	AABR07034438.1	UBX domain protein 7	1	SIFDGFR	SIFDGFR	2	SIFDGFR2	11594.5	4634.95	9448.54
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	SIFDYALR	SIFDYALR	2	SIFDYALR2	28013.7	45495.8	33697.6
A0A8I5ZTB8	A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	SIFENLMK	SIFENLMK	2	SIFENLMK2	42183.6	35139.5	44782.8
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	SIFETYMSK	SIFETYMSK	2	SIFETYMSK2	77832.9	92497.1	74736.1
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	SIFGEDALANVSIEKPVHQGPDAAVTGHIR	SIFGEDALANVSIEKPVHQGPDAAVTGHIR	4	SIFGEDALANVSIEKPVHQGPDAAVTGHIR4	24467.9	37501	21702.6
Q68G38	Q68G38	TOR1A_RAT	Tor1a	Torsin-1A	1	SIFIFDEMDK	SIFIFDEMDK	2	SIFIFDEMDK2	17155.5	13134	16659.4
Q6AY84	Q6AY84	SCRN1_RAT	Scrn1	Secernin-1	1	SIFKPFIFVDDVK	SIFKPFIFVDDVK	3	SIFKPFIFVDDVK3	3188.09	6866.26	7298.77
D3ZD11	D3ZD11	D3ZD11_RAT	Spcs2	Signal peptidase complex subunit 2	1	SIFLVAHR	SIFLVAHR	2	SIFLVAHR2	81794.5	80344.7	67696
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	SIFPIHPSFR	SIFPIHPSFR	3	SIFPIHPSFR3	29021.4	34259.2	36131
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	SIFPQQSLR	SIFPQQSLR	2	SIFPQQSLR2	53073.8	65912.5	64772.6
Q5M7V8	Q5M7V8	TR150_RAT	Thrap3	Thyroid hormone receptor-associated protein 3	1	SIFQHIQSAQSQR	SIFQHIQSAQSQR	3	SIFQHIQSAQSQR3	1774.35		
P07756	P07756	CPSM_RAT	Cps1	Carbamoyl-phosphate synthase [ammonia], mitochondrial	1	SIFSAVLDELK	SIFSAVLDELK	2	SIFSAVLDELK2	2512.21		
Q9Z1W6	Q9Z1W6	LYRIC_RAT	Mtdh	Protein LYRIC	1	SIFSGIGSTAEPVSQSTTSDYQWDGSR	SIFSGIGSTAEPVSQSTTSDYQWDGSR	3	SIFSGIGSTAEPVSQSTTSDYQWDGSR3	6113	9660.02	5503.69
D4A7C0	D4A7C0	GPN2_RAT	Gpn2	GPN-loop GTPase 2	1	SIFSQMAQWDLR	SIFSQMAQWDLR	2	SIFSQMAQWDLR2	4706.56	5431.68	
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	SIFVHPEPFSIENGLLTPTLK	SIFVHPEPFSIENGLLTPTLK	3	SIFVHPEPFSIENGLLTPTLK3	26666.2	11834.1	7208.55
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	SIFYEEEISK	SIFYEEEISK	2	SIFYEEEISK2	34232.9	31217.9	28203.5
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	SIFYEEEISKR	SIFYEEEISKR	3	SIFYEEEISKR3	8428.65	8799.5	
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	SIFYVPEMKPSMFDVSR	SIFYVPEMKPSMFDVSR	3	SIFYVPEMKPSMFDVSR3	22371.7	39983.1	41375.2
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	SIGATLTDVQDVVFK	SIGATLTDVQDVVFK	2	SIGATLTDVQDVVFK2	8844.09	5848.7	3566.33
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	SIGDSVVIGDK	SIGDSVVIGDK	2	SIGDSVVIGDK2	79884.3	78066.1	106799
Q80ZF4	Q80ZF4	Q80ZF4_RAT	Mapkapk2	non-specific serine/threonine protein kinase	1	SIGEAIQYLHSINIAHR	SIGEAIQYLHSINIAHR	3	SIGEAIQYLHSINIAHR3		15247.3	19449.3
Q80ZF4	Q80ZF4	Q80ZF4_RAT	Mapkapk2	non-specific serine/threonine protein kinase	1	SIGEAIQYLHSINIAHR	SIGEAIQYLHSINIAHR	4	SIGEAIQYLHSINIAHR4	2063.7	6823.66	4696.77
D4A746	D4A746	D4A746_RAT	Gmppb	GDP-mannose pyrophosphorylase B	1	SIGESVPEPR	SIGESVPEPR	2	SIGESVPEPR2	36803.4	24440.6	22246.7
B1H274	B1H274	B1H274_RAT	Atg4a	Cysteine protease	1	SIGEWFGPNTVAQVIK	SIGEWFGPNTVAQVIK	2	SIGEWFGPNTVAQVIK2	15375.6	10001.3	9154.73
Q9ESC1	Q9ESC1	AGRL4_RAT	Adgrl4	Adhesion G protein-coupled receptor L4	1	SIGPLLSSSDDFLLGAQSDNSK	SIGPLLSSSDDFLLGAQSDNSK	3	SIGPLLSSSDDFLLGAQSDNSK3	50750.1	44691.3	60909.2
A0A0G2QC33	A0A0G2QC33	ATG4B_RAT	Atg4b	Cysteine protease ATG4B	1	SIGQWYGPNTVAQVLK	SIGQWYGPNTVAQVLK	2	SIGQWYGPNTVAQVLK2	36694.8	45090.3	41418.9
A0A0G2QC33	A0A0G2QC33	ATG4B_RAT	Atg4b	Cysteine protease ATG4B	1	SIGQWYGPNTVAQVLKK	SIGQWYGPNTVAQVLKK	3	SIGQWYGPNTVAQVLKK3	4327.77	8625.01	13744.8
Q2THW7	Q2THW7	ZDHC5_RAT	Zdhhc5	Palmitoyltransferase ZDHHC5	1	SIGSASPGPGQPPLSSPTR	SIGSASPGPGQPPLSSPTR	2	SIGSASPGPGQPPLSSPTR2	10690.9	5283.68	6283.67
A0A8I6AR22	A0A8I6AR22	A0A8I6AR22_RAT	Zdhhc20	Palmitoyltransferase	1	SIGSNQPFPIKPLSESK	SIGSNQPFPIKPLSESK	3	SIGSNQPFPIKPLSESK3	43249	41287.5	48808.5
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	SIGSPESTPK	SIGSPESTPK	2	SIGSPESTPK2	23808.1	17659.2	13088.8
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	SIGTGGIQDLK	SIGTGGIQDLK	2	SIGTGGIQDLK2	29803	21276.9	24695
A0A0G2K0I6	A0A0G2K0I6	A0A0G2K0I6_RAT	Cdh5	Cadherin 5	1	SIGYSIR	SIGYSIR	2	SIGYSIR2	112501	89719.8	86594.6
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	SIHDALCVIR	SIHDALC(UniMod:4)VIR	2	SIHDALC(UniMod:4)VIR2			21991.8
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	SIHDALCVIR	SIHDALC(UniMod:4)VIR	3	SIHDALC(UniMod:4)VIR3	339888	349098	324652
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	SIHGVGELMTQVVLR	SIHGVGELMTQVVLR	2	SIHGVGELMTQVVLR2	2653.97	3348.03	
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	SIHGVGELMTQVVLR	SIHGVGELMTQVVLR	3	SIHGVGELMTQVVLR3	18778.4	22491.8	21288.1
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	SIHIILDLTPNYK	SIHIILDLTPNYK	2	SIHIILDLTPNYK2	6190.48	11323.1	12377.7
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	SIHIILDLTPNYK	SIHIILDLTPNYK	3	SIHIILDLTPNYK3	43465	47075.7	37915
Q06000	Q06000	LIPL_RAT	Lpl	Lipoprotein lipase	1	SIHLFIDSLLNEENPSK	SIHLFIDSLLNEENPSK	2	SIHLFIDSLLNEENPSK2	617.408	2821.46	3360.84
Q06000	Q06000	LIPL_RAT	Lpl	Lipoprotein lipase	1	SIHLFIDSLLNEENPSK	SIHLFIDSLLNEENPSK	3	SIHLFIDSLLNEENPSK3	20418.4	20951.6	30405.3
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	SIHLSDER	SIHLSDER	2	SIHLSDER2	60439.3	64083.8	62451.8
P02770	P02770	ALBU_RAT	Alb	Albumin	1	SIHTLFGDK	SIHTLFGDK	2	SIHTLFGDK2	4.04712e+06	3.6354e+06	3.89131e+06
P02770	P02770	ALBU_RAT	Alb	Albumin	1	SIHTLFGDKLCAIPK	SIHTLFGDKLC(UniMod:4)AIPK	4	SIHTLFGDKLC(UniMod:4)AIPK4	10304.4	2225.52	7283.37
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	SIICQIDTVEGSK	SIIC(UniMod:4)QIDTVEGSK	2	SIIC(UniMod:4)QIDTVEGSK2	33685.6	33732.4	39052.6
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	SIICQIDTVEGSKK	SIIC(UniMod:4)QIDTVEGSKK	2	SIIC(UniMod:4)QIDTVEGSKK2	3324.13		3761.51
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	SIICQIDTVEGSKK	SIIC(UniMod:4)QIDTVEGSKK	3	SIIC(UniMod:4)QIDTVEGSKK3	58886.6	66211	63059.9
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	SIIDEFLHINDFK	SIIDEFLHINDFK	3	SIIDEFLHINDFK3	8714.19	19099.9	3011.56
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	SIIECVDDFR	SIIEC(UniMod:4)VDDFR	2	SIIEC(UniMod:4)VDDFR2	40005.6	42126.7	40959.8
Q63486	Q63486;Q63487	RRAGA_RAT	Rraga	Ras-related GTP-binding protein A	0	SIIFANYIAR	SIIFANYIAR	2	SIIFANYIAR2	65963.3	63811.5	66783
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	SIIFEEHMDK	SIIFEEHMDK	2	SIIFEEHMDK2	4762.55	5088.91	2248.69
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	SIIFEEHMDK	SIIFEEHMDK	3	SIIFEEHMDK3	21992.4	24082.8	35675.3
O08618	O08618	KPRB_RAT	Prpsap2	Phosphoribosyl pyrophosphate synthase-associated protein 2	1	SIIGVIPYFPYSK	SIIGVIPYFPYSK	2	SIIGVIPYFPYSK2	11182.8	18313.6	19173.3
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	SIIHNFR	SIIHNFR	2	SIIHNFR2	4395.36	10740.9	
F1LZ05	F1LZ05	F1LZ05_RAT	Parp14	Poly [ADP-ribose] polymerase	1	SIIHVDGGNDVK	SIIHVDGGNDVK	3	SIIHVDGGNDVK3	2567.38		4135.52
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	SIIMYLTSLFEVLPQQVTIDAIR	SIIMYLTSLFEVLPQQVTIDAIR	3	SIIMYLTSLFEVLPQQVTIDAIR3	7471.23		
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	SIIQDLK	SIIQDLK	2	SIIQDLK2	28379.5	31923	
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	SIIQDLKK	SIIQDLKK	2	SIIQDLKK2	17138	11787	10131.4
M0R402	M0R402	M0R402_RAT	Tmx3	Thioredoxin-related transmembrane protein 3	1	SIIQEVAR	SIIQEVAR	2	SIIQEVAR2	116721	115451	110955
Q4V897	Q4V897	CC90B_RAT	Ccdc90b	Coiled-coil domain-containing protein 90B, mitochondrial	1	SIISETSNK	SIISETSNK	2	SIISETSNK2	55302.5	49494.6	43487.9
G3V7W1	G3V7W1	PDCD6_RAT	Pdcd6	Programmed cell death protein 6	1	SIISMFDR	SIISMFDR	2	SIISMFDR2	61926.5	54898.8	53157.8
G3V7W1	G3V7W1	PDCD6_RAT	Pdcd6	Programmed cell death protein 6	1	SIISMFDRENK	SIISMFDRENK	3	SIISMFDRENK3	8582.82	13216.9	22114.6
P70500	P70500	CDIPT_RAT	Cdipt	CDP-diacylglycerol--inositol 3-phosphatidyltransferase	1	SIISVIHLVTAAR	SIISVIHLVTAAR	2	SIISVIHLVTAAR2	5327.26	5648.52	3081.62
P70500	P70500	CDIPT_RAT	Cdipt	CDP-diacylglycerol--inositol 3-phosphatidyltransferase	1	SIISVIHLVTAAR	SIISVIHLVTAAR	3	SIISVIHLVTAAR3	58231.6	40758.8	33640.7
P70623	P70623	FABP4_RAT	Fabp4	Fatty acid-binding protein, adipocyte	1	SIITLDGGVLVHVQK	SIITLDGGVLVHVQK	3	SIITLDGGVLVHVQK3			2287.84
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	SIITYVVTYYHYFSK	SIITYVVTYYHYFSK	2	SIITYVVTYYHYFSK2	15458.5	8655.4	11366.2
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	SIITYVVTYYHYFSK	SIITYVVTYYHYFSK	3	SIITYVVTYYHYFSK3	53921.3	53692.6	41509.2
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	SIIVDTK	SIIVDTK	1	SIIVDTK1	3456.33	3116.82	2810.1
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	SIIVDTK	SIIVDTK	2	SIIVDTK2	205756	254402	218092
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	SIKDTICNQDER	SIKDTIC(UniMod:4)NQDER	2	SIKDTIC(UniMod:4)NQDER2	8677.35	8361.12	
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	SIKDTICNQDER	SIKDTIC(UniMod:4)NQDER	3	SIKDTIC(UniMod:4)NQDER3	12943.6	12631	21982.7
D3ZJF9	D3ZJF9	D3ZJF9_RAT	Gla	Alpha-galactosidase	1	SILAWTVTHQK	SILAWTVTHQK	2	SILAWTVTHQK2	2192.27	4457.62	
D3ZJF9	D3ZJF9	D3ZJF9_RAT	Gla	Alpha-galactosidase	1	SILAWTVTHQK	SILAWTVTHQK	3	SILAWTVTHQK3	47544	47714	58240.5
P83868	P83868;Q5PQL9	TEBP_RAT	Ptges3	Prostaglandin E synthase 3	0	SILCCLR	SILC(UniMod:4)C(UniMod:4)LR	2	SILC(UniMod:4)C(UniMod:4)LR2	2.63425e+06	2.75332e+06	2.73225e+06
Q9WUD2	Q9WUD2	TRPV2_RAT	Trpv2	Transient receptor potential cation channel subfamily V member 2	1	SILDASLELFK	SILDASLELFK	2	SILDASLELFK2	5730.56	4866.12	5012.03
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	SILDEAPLR	SILDEAPLR	2	SILDEAPLR2	122416	124789	90911.8
P30427	P30427	PLEC_RAT	Plec	Plectin	1	SILDEELQR	SILDEELQR	2	SILDEELQR2	8698.53	7957.49	12249.6
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	SILDEFK	SILDEFK	2	SILDEFK2	20742.9	23546.3	16395.9
P51792	P51792	CLCN3_RAT	Clcn3	H(+)/Cl(-) exchange transporter 3	1	SILDMSPFTVTDHTPMEIVVDIFR	SILDMSPFTVTDHTPMEIVVDIFR	3	SILDMSPFTVTDHTPMEIVVDIFR3		2812.35	
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	SILDQSK	SILDQSK	1	SILDQSK1	7151.41	4421.84	10136.8
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	SILDQSK	SILDQSK	2	SILDQSK2	1.03342e+06	1.23003e+06	1.21199e+06
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	SILEDLR	SILEDLR	1	SILEDLR1		86328	
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	SILEDLR	SILEDLR	2	SILEDLR2	306154	289660	275205
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	SILEDLRSK	SILEDLRSK	2	SILEDLRSK2	20976.6	16143.2	
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	SILENTPQNHVDHSSLK	SILENTPQNHVDHSSLK	3	SILENTPQNHVDHSSLK3	4723.48	6814.16	
Q66H09	Q66H09	Q66H09_RAT	Ttc1	Tetratricopeptide repeat domain 1	1	SILETDPSVHQAR	SILETDPSVHQAR	2	SILETDPSVHQAR2	4017.82		3598.52
Q66H09	Q66H09	Q66H09_RAT	Ttc1	Tetratricopeptide repeat domain 1	1	SILETDPSVHQAR	SILETDPSVHQAR	3	SILETDPSVHQAR3	66824.3	72826	60055.5
F1LT49	F1LT49	F1LT49_RAT	Lrrc47	Leucine rich repeat containing 47	1	SILEYLR	SILEYLR	2	SILEYLR2	32887.5	27884.5	27070.7
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	SILFVPTSAPR	SILFVPTSAPR	2	SILFVPTSAPR2	2.75776e+06	3.68631e+06	3.73983e+06
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	SILFVPTSAPR	SILFVPTSAPR	3	SILFVPTSAPR3	8220.27	7377.8	8820.25
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	SILGHILPEAMVCYLENYEPEK	SILGHILPEAMVC(UniMod:4)YLENYEPEK	3	SILGHILPEAMVC(UniMod:4)YLENYEPEK3	18396.1	11460.6	9869.6
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	SILGIDIVR	SILGIDIVR	2	SILGIDIVR2	11752.9	11751.4	9633.67
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	SILGTLTVEQIYQDR	SILGTLTVEQIYQDR	2	SILGTLTVEQIYQDR2	4297.84	9117.78	
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	SILGTLTVEQIYQDRDQFAK	SILGTLTVEQIYQDRDQFAK	3	SILGTLTVEQIYQDRDQFAK3	22307.2	13689.5	16220.2
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	SILIDESTQATEPECMVPVVLGAK	SILIDESTQATEPEC(UniMod:4)MVPVVLGAK	3	SILIDESTQATEPEC(UniMod:4)MVPVVLGAK3	19475.8	12749.2	7615.92
O70601	O70601	LAT_RAT	Lat	Linker for activation of T-cells family member 1	1	SILIKPPQITVPR	SILIKPPQITVPR	2	SILIKPPQITVPR2	21770	13673.8	8920.72
O70601	O70601	LAT_RAT	Lat	Linker for activation of T-cells family member 1	1	SILIKPPQITVPR	SILIKPPQITVPR	3	SILIKPPQITVPR3	273786	258430	260952
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	SILKPQAWRPLAEHSGSK	SILKPQAWRPLAEHSGSK	3	SILKPQAWRPLAEHSGSK3	9370.93	6546.41	
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	SILKPQAWRPLAEHSGSK	SILKPQAWRPLAEHSGSK	4	SILKPQAWRPLAEHSGSK4	35002.4	51444.4	44278
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	SILLSVPLLVVDNK	SILLSVPLLVVDNK	2	SILLSVPLLVVDNK2	66303.9	52575.6	83785
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	SILLSVPLLVVDNK	SILLSVPLLVVDNK	3	SILLSVPLLVVDNK3	8592.78	8598.77	4488.45
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	SILPSNLLTVCQEGTLK	SILPSNLLTVC(UniMod:4)QEGTLK	2	SILPSNLLTVC(UniMod:4)QEGTLK2	16294.4	22791.6	16924.2
O54975	A0A8I5ZXX1;O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	0	SILSELK	SILSELK	2	SILSELK2	171782	160967	150674
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	SILSSLSGEELQTTR	SILSSLSGEELQTTR	2	SILSSLSGEELQTTR2	60592.1	55479.6	54653.4
B5DF86	B5DF86	B5DF86_RAT	Cog8	Conserved oligomeric Golgi complex subunit 8	1	SILTAIPNDDPYFHITK	SILTAIPNDDPYFHITK	2	SILTAIPNDDPYFHITK2	3128.89	2097.56	
B5DF86	B5DF86	B5DF86_RAT	Cog8	Conserved oligomeric Golgi complex subunit 8	1	SILTAIPNDDPYFHITK	SILTAIPNDDPYFHITK	3	SILTAIPNDDPYFHITK3	17513.1	35776	24598.9
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	SILTISR	SILTISR	2	SILTISR2	55130.4		
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	SILTLSHEPK	SILTLSHEPK	2	SILTLSHEPK2	7400.14	3503.27	5459.49
A0A8I6A6I4	A0A8I6A6I4	A0A8I6A6I4_RAT	Atp11b	Phospholipid-transporting ATPase	1	SILTLSPMDSSTC	SILTLSPMDSSTC(UniMod:4)	2	SILTLSPMDSSTC(UniMod:4)2	3006.47		
Q9EQG6	Q9EQG6	KDIS_RAT	Kidins220	Kinase D-interacting substrate of 220 kDa	1	SILTQIFGAR	SILTQIFGAR	2	SILTQIFGAR2	6301.48	15543.9	9943.4
F1LRE5	F1LRE5	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	1	SILTVPWVELGGECSINCSK	SILTVPWVELGGEC(UniMod:4)SINC(UniMod:4)SK	3	SILTVPWVELGGEC(UniMod:4)SINC(UniMod:4)SK3		2980.87	
B5DF74	B5DF74;F1LWM8	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	0	SILTVPWVELGGK	SILTVPWVELGGK	2	SILTVPWVELGGK2	39915.6	33053	49620.2
A0A0U1RS29	A0A0U1RS29;Q03386	A0A0U1RS29_RAT	Rgl2	Ral guanine nucleotide dissociation stimulator-like 2	0	SILVTSQDK	SILVTSQDK	2	SILVTSQDK2	13616.7		9101.39
A0A0U1RS29	A0A0U1RS29	A0A0U1RS29_RAT	Rgl2	Ral guanine nucleotide dissociation stimulator-like 2	1	SILVTSQDKAPSVISR	SILVTSQDKAPSVISR	3	SILVTSQDKAPSVISR3	8440.33	10561.3	15188.1
P17220	P17220	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	1	SILYDER	SILYDER	1	SILYDER1	3562.37	1852.74	2170.63
A0A8I6A7R6	A0A8I6A7R6	A0A8I6A7R6_RAT	ENSRNOG00000065040	Ig-like domain-containing protein	1	SILYLQMNTLK	SILYLQMNTLK	2	SILYLQMNTLK2	4312.87	3342.72	6433.78
A0A8I6A7R6	A0A8I6A7R6	A0A8I6A7R6_RAT	ENSRNOG00000065040	Ig-like domain-containing protein	1	SILYLQMNTLKPEDTAIYYCAR	SILYLQMNTLKPEDTAIYYC(UniMod:4)AR	3	SILYLQMNTLKPEDTAIYYC(UniMod:4)AR3	357914	345027	301805
A0A8I6A7R6	A0A8I6A7R6	A0A8I6A7R6_RAT	ENSRNOG00000065040	Ig-like domain-containing protein	1	SILYLQMNTLKPEDTAIYYCAR	SILYLQMNTLKPEDTAIYYC(UniMod:4)AR	4	SILYLQMNTLKPEDTAIYYC(UniMod:4)AR4	83148.1	86576.9	75412.4
F1M3X3	F1M3X3	F1M3X3_RAT	ENSRNOG00000068908	Ig-like domain-containing protein	1	SILYLQMSNMR	SILYLQMSNMR	2	SILYLQMSNMR2	19259.8	14123.4	17068.3
Q5I0C3	Q5I0C3	MCCA_RAT	Mccc1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	1	SIMAAAGVPVVEGYHGNDQSDECLK	SIMAAAGVPVVEGYHGNDQSDEC(UniMod:4)LK	3	SIMAAAGVPVVEGYHGNDQSDEC(UniMod:4)LK3	8158.11	9688.19	12551.3
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	SIMMDGK	SIMMDGK	2	SIMMDGK2	47384.3	43527.7	43467.8
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	SIMMDGKDVMPEVNK	SIMMDGKDVMPEVNK	2	SIMMDGKDVMPEVNK2	3003.76	5973.77	
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	SIMMDGKDVMPEVNK	SIMMDGKDVMPEVNK	3	SIMMDGKDVMPEVNK3	68084.2	64791.5	70572.4
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	SIMTDLYYLSQTDGAGDWR	SIMTDLYYLSQTDGAGDWR	3	SIMTDLYYLSQTDGAGDWR3	16727.9	15976.7	5262.33
D3Z8Q7	D3Z8Q7	D3Z8Q7_RAT	Ciao2b	Cytosolic iron-sulfur assembly component 2B	1	SINDPEHPLTLEELNVVEQVR	SINDPEHPLTLEELNVVEQVR	3	SINDPEHPLTLEELNVVEQVR3	17078.4	8792.63	29664.8
A0A0G2JUU7	A0A0G2JUU7	A0A0G2JUU7_RAT	Tubgcp3	Gamma-tubulin complex component	1	SINFLHQVCHDQTPTTK	SINFLHQVC(UniMod:4)HDQTPTTK	3	SINFLHQVC(UniMod:4)HDQTPTTK3		4395.06	
A0A0G2JUU7	A0A0G2JUU7	A0A0G2JUU7_RAT	Tubgcp3	Gamma-tubulin complex component	1	SINFLHQVCHDQTPTTK	SINFLHQVC(UniMod:4)HDQTPTTK	4	SINFLHQVC(UniMod:4)HDQTPTTK4	6559.01	8798.84	8972.51
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	SINLPRPDNETLWDK	SINLPRPDNETLWDK	3	SINLPRPDNETLWDK3	45985.8	33496.1	53756.2
P55213	P55213	CASP3_RAT	Casp3	Caspase-3	1	SINNFETK	SINNFETK	2	SINNFETK2	72325	77833.3	89488.9
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	SINNPDMR	SINNPDMR	2	SINNPDMR2	51692.6	62402.8	56382
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	SINNSLVVGQK	SINNSLVVGQK	2	SINNSLVVGQK2	22674.2	26860.1	24282.3
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	SINPDEAVAYGAAVQAAILIGDK	SINPDEAVAYGAAVQAAILIGDK	3	SINPDEAVAYGAAVQAAILIGDK3	5557.62	10069.2	8582.18
P0DMW0;P0DMW1	P0DMW0;P0DMW1;P55063	HS71A_RAT;HS71B_RAT	Hspa1a;Hspa1b	Heat shock 70 kDa protein 1A	0	SINPDEAVAYGAAVQAAILMGDK	SINPDEAVAYGAAVQAAILMGDK	3	SINPDEAVAYGAAVQAAILMGDK3	6492.94	7208.84	3844.58
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	SINPDEAVAYGAAVQAAILSGDK	SINPDEAVAYGAAVQAAILSGDK	3	SINPDEAVAYGAAVQAAILSGDK3	533355	469428	517571
Q5M7A4	Q5M7A4	UBA5_RAT	Uba5	Ubiquitin-like modifier-activating enzyme 5	1	SINPDVLFEVHNYNITTVEHFEHFMNR	SINPDVLFEVHNYNITTVEHFEHFMNR	4	SINPDVLFEVHNYNITTVEHFEHFMNR4		13776.2	16745.2
A0A8J8XJD4;Q0PY50	A0A8J8XJD4;Q0PY50	A0A8J8XJD4_RAT;Q0PY50_RAT	Aph1b;Aph1bl2	Gamma-secretase subunit APH-1	0	SINPEETAPSMR	SINPEETAPSMR	2	SINPEETAPSMR2	8374.94	7752.31	4920.22
P21531	P21531	RL3_RAT	Rpl3	Large ribosomal subunit protein uL3	1	SINPLGGFVHYGEVTNDFIMLK	SINPLGGFVHYGEVTNDFIMLK	3	SINPLGGFVHYGEVTNDFIMLK3	23499.8	16583	17838.8
G3V829	G3V829	G3V829_RAT	Fubp3	Far upstream element binding protein 3	1	SINQQSGAHVELQR	SINQQSGAHVELQR	3	SINQQSGAHVELQR3	3575.96	5061.49	5097.57
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	SINSILDYISTSK	SINSILDYISTSK	2	SINSILDYISTSK2	119306	104372	95397.6
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	SINSILDYISTSK	SINSILDYISTSK	3	SINSILDYISTSK3	12287	22157.5	18077.8
G3V7E6	G3V7E6	G3V7E6_RAT	Pcm1	Pericentriolar material 1	1	SINSSCEINNR	SINSSC(UniMod:4)EINNR	2	SINSSC(UniMod:4)EINNR2	3861.26	2049.68	1520.18
Q9Z0V5	Q9Z0V5	PRDX4_RAT	Prdx4	Peroxiredoxin-4	1	SINTEVVACSVDSQFTHLAWINTPR	SINTEVVAC(UniMod:4)SVDSQFTHLAWINTPR	3	SINTEVVAC(UniMod:4)SVDSQFTHLAWINTPR3	63656.6	60262.9	67005.7
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	SINYDEKDPFLCNACGFCK	SINYDEKDPFLC(UniMod:4)NAC(UniMod:4)GFC(UniMod:4)K	3	SINYDEKDPFLC(UniMod:4)NAC(UniMod:4)GFC(UniMod:4)K3	19349.5	15650.2	26790.4
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	SIPACTDFEVAQFPLR	SIPAC(UniMod:4)TDFEVAQFPLR	2	SIPAC(UniMod:4)TDFEVAQFPLR2	1.07869e+06	1.17737e+06	1.05455e+06
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	SIPACTDFEVAQFPLR	SIPAC(UniMod:4)TDFEVAQFPLR	3	SIPAC(UniMod:4)TDFEVAQFPLR3	279070	325354	323100
P50408	P50408;A0A8I6GI88	VATF_RAT	Atp6v1f	V-type proton ATPase subunit F	0	SIPAVLEIPSK	SIPAVLEIPSK	2	SIPAVLEIPSK2	35741.8	25509.7	41599.3
Q9JK66	Q9JK66	PRKN_RAT	Prkn	E3 ubiquitin-protein ligase parkin	1	SIPCIACTDVR	SIPC(UniMod:4)IAC(UniMod:4)TDVR	2	SIPC(UniMod:4)IAC(UniMod:4)TDVR2	12855.3		
G3V6R7	G3V6R7	G3V6R7_RAT	Oxsm	3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial	1	SIPCSVAAFVPR	SIPC(UniMod:4)SVAAFVPR	2	SIPC(UniMod:4)SVAAFVPR2	15988.8	25354	16425.9
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	SIPDGSEK	SIPDGSEK	2	SIPDGSEK2	333496	326517	183168
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	SIPDGTEHGDFLALDLGGTNFR	SIPDGTEHGDFLALDLGGTNFR	3	SIPDGTEHGDFLALDLGGTNFR3	250143	266231	205324
Q5U300	Q5U300;A0A8I5ZVX0;A0A8I6A544	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	0	SIPICTLK	SIPIC(UniMod:4)TLK	2	SIPIC(UniMod:4)TLK2	331568	266861	304186
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	SIPLAMAPVFEQK	SIPLAMAPVFEQK	2	SIPLAMAPVFEQK2	305268	330534	304616
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	SIPLAMAPVFEQK	SIPLAMAPVFEQK	3	SIPLAMAPVFEQK3	4393.06	3799.84	8008.2
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	SIPLSIK	SIPLSIK	1	SIPLSIK1	17869.5	13433.6	14376.7
P27605	P27605	HPRT_RAT	Hprt1	Hypoxanthine-guanine phosphoribosyltransferase	1	SIPMTVDFIR	SIPMTVDFIR	2	SIPMTVDFIR2	81749.5	67265.3	87641.1
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	SIPPYNTEVTETTIVITWTPAPR	SIPPYNTEVTETTIVITWTPAPR	3	SIPPYNTEVTETTIVITWTPAPR3	1.09019e+07	1.32104e+07	1.07852e+07
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	SIPPYNTEVTETTIVITWTPAPR	SIPPYNTEVTETTIVITWTPAPR	4	SIPPYNTEVTETTIVITWTPAPR4	292163	379720	355335
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	SIPPYNTEVTETTIVITWTPAPRIGFK	SIPPYNTEVTETTIVITWTPAPRIGFK	4	SIPPYNTEVTETTIVITWTPAPRIGFK4	14792	8962.73	14617.8
A0A0G2K2Z2	A0A0G2K2Z2	A0A0G2K2Z2_RAT	Inpp5k	Inositol polyphosphate-5-phosphatase K	1	SIPTGLYGYWGNK	SIPTGLYGYWGNK	2	SIPTGLYGYWGNK2	18768.9	28548.2	27055.3
P51886	P51886	LUM_RAT	Lum	Lumican	1	SIPTVNENLENYYLEVNK	SIPTVNENLENYYLEVNK	3	SIPTVNENLENYYLEVNK3	2.23964e+06	2.07122e+06	2.47086e+06
P51886	P51886	LUM_RAT	Lum	Lumican	1	SIPTVNENLENYYLEVNKLEK	SIPTVNENLENYYLEVNKLEK	3	SIPTVNENLENYYLEVNKLEK3	555554	564450	635925
Q4V8B7	Q4V8B7	HSDL1_RAT	Hsdl1	Inactive hydroxysteroid dehydrogenase-like protein 1	1	SIPVICDFYSLVR	SIPVIC(UniMod:4)DFYSLVR	2	SIPVIC(UniMod:4)DFYSLVR2	79994.4	78942.4	69708.1
Q4V8B7	Q4V8B7	HSDL1_RAT	Hsdl1	Inactive hydroxysteroid dehydrogenase-like protein 1	1	SIPVICDFYSLVR	SIPVIC(UniMod:4)DFYSLVR	3	SIPVIC(UniMod:4)DFYSLVR3	4902.87	7399.35	9242.42
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	SIPVTQELICK	SIPVTQELIC(UniMod:4)K	2	SIPVTQELIC(UniMod:4)K2	132917	112433	137865
A0A8I5ZSB0	A0A8I5ZSB0	A0A8I5ZSB0_RAT	Igtp	Interferon gamma induced GTPase	1	SIQAAVAGGNGVEVVSIVK	SIQAAVAGGNGVEVVSIVK	2	SIQAAVAGGNGVEVVSIVK2	3867.26	721.626	
B5DEN5	B5DEN5	B5DEN5_RAT	Eef1b2	Elongation factor 1-beta	1	SIQADGLVWGSSK	SIQADGLVWGSSK	2	SIQADGLVWGSSK2	398151	391711	454265
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	SIQCLTVHK	SIQC(UniMod:4)LTVHK	2	SIQC(UniMod:4)LTVHK2	72580.9	60345	63697.7
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	SIQDAELLVK	SIQDAELLVK	2	SIQDAELLVK2	27845.2	35096.1	41103.4
P0C8E4	P0C8E4	M3K7_RAT	Map3k7	Mitogen-activated protein kinase kinase kinase 7	1	SIQDLTVTGTEPGQVSSR	SIQDLTVTGTEPGQVSSR	2	SIQDLTVTGTEPGQVSSR2	5485.44	4700.41	6015.42
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	SIQDLVSLK	SIQDLVSLK	2	SIQDLVSLK2	23263.2	18802.9	25438.1
Q5XI73	Q5XI73	GDIR1_RAT	Arhgdia	Rho GDP-dissociation inhibitor 1	1	SIQEIQELDK	SIQEIQELDK	2	SIQEIQELDK2	16733.4	9292.04	10105
Q5XI73	Q5XI73	GDIR1_RAT	Arhgdia	Rho GDP-dissociation inhibitor 1	1	SIQEIQELDKDDESLR	SIQEIQELDKDDESLR	2	SIQEIQELDKDDESLR2	3096.65	3406.02	1259.31
Q5XI73	Q5XI73	GDIR1_RAT	Arhgdia	Rho GDP-dissociation inhibitor 1	1	SIQEIQELDKDDESLR	SIQEIQELDKDDESLR	3	SIQEIQELDKDDESLR3	113569	83164.5	98283.3
Q5XI73	Q5XI73	GDIR1_RAT	Arhgdia	Rho GDP-dissociation inhibitor 1	1	SIQEIQELDKDDESLRK	SIQEIQELDKDDESLRK	3	SIQEIQELDKDDESLRK3	296286	257500	232235
Q5XI73	Q5XI73	GDIR1_RAT	Arhgdia	Rho GDP-dissociation inhibitor 1	1	SIQEIQELDKDDESLRK	SIQEIQELDKDDESLRK	4	SIQEIQELDKDDESLRK4	106228	94235.5	114718
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	SIQELQAAK	SIQELQAAK	2	SIQELQAAK2	43110.6	37570.5	44060
Q5PQX0	Q5PQX0	UXS1_RAT	Uxs1	UDP-glucuronic acid decarboxylase 1	1	SIQENGELK	SIQENGELK	2	SIQENGELK2			4566.06
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	SIQESTGGIIEVLHK	SIQESTGGIIEVLHK	2	SIQESTGGIIEVLHK2	5300.68	1132.86	
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	SIQESTGGIIEVLHK	SIQESTGGIIEVLHK	3	SIQESTGGIIEVLHK3	37135	42510.7	33724.2
Q5XIF6	Q5XIF6;Q6P9V9	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	SIQFVDWCPTGFK	SIQFVDWC(UniMod:4)PTGFK	2	SIQFVDWC(UniMod:4)PTGFK2	79175	74277.4	78855.2
Q5XIF6	Q5XIF6;Q6P9V9	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	SIQFVDWCPTGFK	SIQFVDWC(UniMod:4)PTGFK	3	SIQFVDWC(UniMod:4)PTGFK3	741187	741794	751760
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	SIQGHHVCLLVK	SIQGHHVC(UniMod:4)LLVK	2	SIQGHHVC(UniMod:4)LLVK2	6066.14	5731.61	1889.99
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	SIQGHHVCLLVK	SIQGHHVC(UniMod:4)LLVK	3	SIQGHHVC(UniMod:4)LLVK3	39249.3	41797	35355.9
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	SIQHCSIR	SIQHC(UniMod:4)SIR	2	SIQHC(UniMod:4)SIR2	31792.1	13481.6	5991.75
A0A8I6A5Y0	A0A8I6A5Y0	A0A8I6A5Y0_RAT	Vta1	Vesicle trafficking 1	1	SIQHHLR	SIQHHLR	2	SIQHHLR2			6136.71
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	SIQIHGTMR	SIQIHGTMR	2	SIQIHGTMR2	1660.94		7338.8
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	SIQLDGLVWGASK	SIQLDGLVWGASK	2	SIQLDGLVWGASK2	632132	549582	571783
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	SIQLDGLVWGASK	SIQLDGLVWGASK	3	SIQLDGLVWGASK3	23905.9	16402.5	26974.3
A0A8I6ANR6	A0A8I6ANR6	A0A8I6ANR6_RAT	Chuk	IkappaB kinase	1	SIQLDLER	SIQLDLER	2	SIQLDLER2	13542.6	24256.4	12627.2
Q765A7	Q765A7	PGAP1_RAT	Pgap1	GPI inositol-deacylase	1	SIQLPVTHLFSFGLSSR	SIQLPVTHLFSFGLSSR	3	SIQLPVTHLFSFGLSSR3	13644.9		17904.3
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	SIQQCSVR	SIQQC(UniMod:4)SVR	2	SIQQC(UniMod:4)SVR2	8457.62	10125.5	14531
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	SIQSDAPVYLR	SIQSDAPVYLR	2	SIQSDAPVYLR2	47770.4	41658	52663.4
O35509	O35509;P62494	RB11B_RAT	Rab11b	Ras-related protein Rab-11B	0	SIQVDGK	SIQVDGK	1	SIQVDGK1	30712.4	23196.4	30893.1
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	SIQVLFNGNNR	SIQVLFNGNNR	2	SIQVLFNGNNR2	17185.2	6015.42	9931.37
D3ZYT8	D3ZYT8	D3ZYT8_RAT	Pikfyve	1-phosphatidylinositol-3-phosphate 5-kinase	1	SIQVLPSHELVSTR	SIQVLPSHELVSTR	3	SIQVLPSHELVSTR3	9649.41	7412.36	10507.7
A0A8I5YC59	A0A8I5YC59	A0A8I5YC59_RAT	Pcdh10	Protocadherin 10	1	SIQVQVSDVNDNAPR	SIQVQVSDVNDNAPR	2	SIQVQVSDVNDNAPR2		2742.89	1877.57
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	SIREDMPIINSFFK	SIREDMPIINSFFK	3	SIREDMPIINSFFK3	17899.5	11240.3	17118.3
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	SIRLPETIDLGALYLSMKDPEK	SIRLPETIDLGALYLSMKDPEK	4	SIRLPETIDLGALYLSMKDPEK4	3485.88	8051.84	6569.21
A0A8I6A678	A0A8I6A678	A0A8I6A678_RAT	Snx2	Sorting nexin-2	1	SISAPVIFDR	SISAPVIFDR	2	SISAPVIFDR2	54597	66884.8	55987.5
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	SISATEAIQR	SISATEAIQR	2	SISATEAIQR2	205891	233228	213111
B0BNN4	B0BNN4	B0BNN4_RAT	Cfp	Complement factor properdin	1	SISCDEIPGQQSR	SISC(UniMod:4)DEIPGQQSR	2	SISC(UniMod:4)DEIPGQQSR2	50947.1	37699.3	31164.8
B0BNN4	B0BNN4	B0BNN4_RAT	Cfp	Complement factor properdin	1	SISCDEIPGQQSR	SISC(UniMod:4)DEIPGQQSR	3	SISC(UniMod:4)DEIPGQQSR3	5408.33	4795.35	
A0A8I6AZI9	A0A8I6AZI9	A0A8I6AZI9_RAT	Ubash3a	Ubiquitin associated and SH3 domain containing, A	1	SISDIQALQATIAR	SISDIQALQATIAR	2	SISDIQALQATIAR2	9087.13	5701.5	9330.48
Q642B0	Q642B0	Q642B0_RAT	Gpc4	Glypican 4	1	SISESAFSAR	SISESAFSAR	2	SISESAFSAR2	15728.6	17081.9	32908.9
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	SISFIPPDGEFELMR	SISFIPPDGEFELMR	2	SISFIPPDGEFELMR2	62247.8	42036.9	73742.9
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	SISGFVGLR	SISGFVGLR	2	SISGFVGLR2	33638	48073	27929.8
Q91XS8	Q91XS8	ST17B_RAT	Stk17b	Serine/threonine-protein kinase 17B	1	SISGLLTTTPQTPMK	SISGLLTTTPQTPMK	2	SISGLLTTTPQTPMK2	11809.3	7101.75	13390.1
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	SISGTPAETPACK	SISGTPAETPAC(UniMod:4)K	2	SISGTPAETPAC(UniMod:4)K2	9638.89	16317.3	14876.9
A0A8I6A822	A0A8I6A822	A0A8I6A822_RAT	Tm9sf3	Transmembrane 9 superfamily member	1	SISHYHETLGEALQGVELEFSGLDIK	SISHYHETLGEALQGVELEFSGLDIK	3	SISHYHETLGEALQGVELEFSGLDIK3	20486.4	20212.8	9125.52
A0A8I6A822	A0A8I6A822	A0A8I6A822_RAT	Tm9sf3	Transmembrane 9 superfamily member	1	SISHYHETLGEALQGVELEFSGLDIK	SISHYHETLGEALQGVELEFSGLDIK	4	SISHYHETLGEALQGVELEFSGLDIK4	91888.8	95205.8	121998
Q8R3Z7	Q8R3Z7	Q8R3Z7_RAT	Ehd4	EH-domain containing 4	1	SISIIDSPGILSGEK	SISIIDSPGILSGEK	2	SISIIDSPGILSGEK2	35804	29952.2	38619.2
A0A0G2JST1	A0A0G2JST1	A0A0G2JST1_RAT	Adgrg6	Adhesion G protein-coupled receptor G6	1	SISIPELK	SISIPELK	2	SISIPELK2	24723.6	20643.8	32232.3
P20760	P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	1	SISKPEGTPR	SISKPEGTPR	2	SISKPEGTPR2	497037	487074	529836
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	SISLPRPGSSGLTSGPNSILSR	SISLPRPGSSGLTSGPNSILSR	3	SISLPRPGSSGLTSGPNSILSR3	25887.5	39387.6	22028.5
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	SISLVQGGR	SISLVQGGR	2	SISLVQGGR2	67264.2	75881.4	85616.6
Q5XIJ4	Q5XIJ4	F210A_RAT	Fam210a	Protein FAM210A	1	SISLYQR	SISLYQR	2	SISLYQR2	42318.1	59621.1	70200.2
P48032	P48032	TIMP3_RAT	Timp3	Metalloproteinase inhibitor 3	1	SISNATDP	SISNATDP	1	SISNATDP1	530575	536027	374948
P48032	P48032	TIMP3_RAT	Timp3	Metalloproteinase inhibitor 3	1	SISNATDP	SISNATDP	2	SISNATDP2	33607.8	36783.4	31673.9
A0A0G2JW41	A0A0G2JW41	A0A0G2JW41_RAT	ENSRNOG00000065855	Ig-like domain-containing protein	1	SISNNLAWYQEKPGK	SISNNLAWYQEKPGK	2	SISNNLAWYQEKPGK2	13378.7	13592.6	11961.7
A0A0G2JW41	A0A0G2JW41	A0A0G2JW41_RAT	ENSRNOG00000065855	Ig-like domain-containing protein	1	SISNNLAWYQEKPGK	SISNNLAWYQEKPGK	3	SISNNLAWYQEKPGK3	247397	205965	237790
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	SISNPPGSNLR	SISNPPGSNLR	2	SISNPPGSNLR2	28952	23968.8	28485.1
A0A8I5ZX10	A0A8I5ZX10	A0A8I5ZX10_RAT	ENSRNOG00000063329	Ig-like domain-containing protein	1	SISNYLAWYQQK	SISNYLAWYQQK	2	SISNYLAWYQQK2	10546.5	6255.52	7355.14
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	SISPEWK	SISPEWK	2	SISPEWK2	193324	298544	249731
F1LTX4	F1LTX4	F1LTX4_RAT	Lrrn4	Leucine rich repeat neuronal 4	1	SISQINQR	SISQINQR	2	SISQINQR2	12967.6	11838.4	14548.9
F1M9Q3	F1M9Q3	F1M9Q3_RAT	Ltn1	E3 ubiquitin-protein ligase listerin	1	SISSDEVKPYYK	SISSDEVKPYYK	3	SISSDEVKPYYK3	15464.2	14547.4	24685.3
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	SISSPSMNR	SISSPSMNR	2	SISSPSMNR2	25265.7	23344.9	22906
F1LWZ3	F1LWZ3	F1LWZ3_RAT	Rhbdf2	Inactive rhomboid protein	1	SISSTVQR	SISSTVQR	2	SISSTVQR2	21572.6	25221.5	28754.4
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	SISTCGPLDKDEPGGQK	SISTC(UniMod:4)GPLDKDEPGGQK	3	SISTC(UniMod:4)GPLDKDEPGGQK3	33716.1	32731.1	23182.3
P50116	P50116	S10A9_RAT	S100a9	Protein S100-A9	1	SISTIINVFHQYSR	SISTIINVFHQYSR	2	SISTIINVFHQYSR2	3807.14		
P50116	P50116	S10A9_RAT	S100a9	Protein S100-A9	1	SISTIINVFHQYSR	SISTIINVFHQYSR	3	SISTIINVFHQYSR3	10224.8	12503	9346.92
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	SISTSLPVLDLIDAIAPNAVRPEMIK	SISTSLPVLDLIDAIAPNAVRPEMIK	3	SISTSLPVLDLIDAIAPNAVRPEMIK3		10380.8	18875.6
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	SISVEDKPDVR	SISVEDKPDVR	2	SISVEDKPDVR2	5035.92	4242.26	10159.8
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	SISVEDKPDVR	SISVEDKPDVR	3	SISVEDKPDVR3	23895.3	26751.8	31059.2
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	SISVNQWGSQLGLSVLSK	SISVNQWGSQLGLSVLSK	2	SISVNQWGSQLGLSVLSK2		2446.95	
D3Z9C0	D3Z9C0	D3Z9C0_RAT	Mios	Meiosis regulator for oocyte development	1	SISYSCSSVPHQGR	SISYSC(UniMod:4)SSVPHQGR	3	SISYSC(UniMod:4)SSVPHQGR3	4328.78		8841.53
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	SITAAPAETPHEK	SITAAPAETPHEK	3	SITAAPAETPHEK3	19717.9	21924.2	11651.6
A0A8I5ZS02	A0A8I5ZS02	A0A8I5ZS02_RAT	Ptges3l	Prostaglandin E synthase 3 like	1	SITCFVR	SITC(UniMod:4)FVR	2	SITC(UniMod:4)FVR2	330545	389936	343400
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	SITCWTLSR	SITC(UniMod:4)WTLSR	2	SITC(UniMod:4)WTLSR2	61672.9	74775.4	69502.4
P32198	P32198	CPT1A_RAT	Cpt1a	Carnitine O-palmitoyltransferase 1, liver isoform	1	SITFVVFK	SITFVVFK	2	SITFVVFK2	41743	48199.2	38295.1
Q9QZR6	Q9QZR6	SEPT9_RAT	Septin9	Septin-9	1	SITHDIEEK	SITHDIEEK	2	SITHDIEEK2	4413.89	1042.79	
P08650	P08650	CO5_RAT	C5	Complement C5	1	SITHSADGVASFVVNLPSEVTSLK	SITHSADGVASFVVNLPSEVTSLK	3	SITHSADGVASFVVNLPSEVTSLK3	528400	400855	439122
P47942	P47942	DPYL2_RAT	Dpysl2	Dihydropyrimidinase-related protein 2	1	SITIANQTNCPLYVTK	SITIANQTNC(UniMod:4)PLYVTK	2	SITIANQTNC(UniMod:4)PLYVTK2	10307.2	9735.15	8435.3
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	SITLFVQEDR	SITLFVQEDR	2	SITLFVQEDR2	751740	682268	563263
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	SITLFVQEDR	SITLFVQEDR	3	SITLFVQEDR3	12592.1	4754.03	6841.16
A0A8I6G1H3	A0A8I6G1H3	A0A8I6G1H3_RAT	Irak4	Interleukin-1 receptor-associated kinase 4	1	SITNDFDERPVSIGGNR	SITNDFDERPVSIGGNR	3	SITNDFDERPVSIGGNR3		3092.15	5940.7
Q5XI64	Q5XI64	ABHD6_RAT	Abhd6	Monoacylglycerol lipase ABHD6	1	SITNSQVEVLENCGHSVVMER	SITNSQVEVLENC(UniMod:4)GHSVVMER	3	SITNSQVEVLENC(UniMod:4)GHSVVMER3	2870.22	10361.8	6905.68
P31652	P31652	SC6A4_RAT	Slc6a4	Sodium-dependent serotonin transporter	1	SITPETPTEIPCGDIR	SITPETPTEIPC(UniMod:4)GDIR	2	SITPETPTEIPC(UniMod:4)GDIR2	576690	658858	634211
P31652	P31652	SC6A4_RAT	Slc6a4	Sodium-dependent serotonin transporter	1	SITPETPTEIPCGDIR	SITPETPTEIPC(UniMod:4)GDIR	3	SITPETPTEIPC(UniMod:4)GDIR3	66908	83116.5	98041.5
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	SITPLSGTPGTLITIQGR	SITPLSGTPGTLITIQGR	2	SITPLSGTPGTLITIQGR2	17763.4	14374	10927.5
Q6P6Q9	Q6P6Q9	MICU1_RAT	Micu1	Calcium uptake protein 1, mitochondrial	1	SITPNEK	SITPNEK	2	SITPNEK2	101767	95471.1	107166
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	SITVIGGGFLGSELACALGR	SITVIGGGFLGSELAC(UniMod:4)ALGR	3	SITVIGGGFLGSELAC(UniMod:4)ALGR3	5163.15	8090.91	
Q9ES58	Q9ES58	MO2R1_RAT	Cd200r1	Cell surface glycoprotein CD200 receptor 1	1	SITWASTPDLAPDLQISAVALQHEGR	SITWASTPDLAPDLQISAVALQHEGR	3	SITWASTPDLAPDLQISAVALQHEGR3	56787.3	54426.4	63908.9
Q5I0H9	Q5I0H9	PDIA5_RAT	Pdia5	Protein disulfide-isomerase A5	1	SIVAFLK	SIVAFLK	2	SIVAFLK2	18237.5	17038.5	13480.8
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	SIVDAYVLLNLGDSVTTDHISPAGNIAR	SIVDAYVLLNLGDSVTTDHISPAGNIAR	3	SIVDAYVLLNLGDSVTTDHISPAGNIAR3	3529.89	3723.94	11415.4
A0A8I6A3H1	A0A8I6A3H1	A0A8I6A3H1_RAT	Ero1b	Endoplasmic reticulum oxidoreductase 1 beta	1	SIVDLYTGNLEDDADTK	SIVDLYTGNLEDDADTK	2	SIVDLYTGNLEDDADTK2	2642.53	2770.77	3702.9
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	SIVDNWPENHVK	SIVDNWPENHVK	3	SIVDNWPENHVK3	45924.9	39778.8	34999.4
P20909	P20909	COBA1_RAT	Col11a1	Collagen alpha-1(XI) chain	1	SIVDTNGIMVFGTR	SIVDTNGIMVFGTR	2	SIVDTNGIMVFGTR2	17382.6	27498	30170.7
F1M7P8	F1M7P8	F1M7P8_RAT	Spryd3	SPRY domain containing 3	1	SIVDVGLAQAR	SIVDVGLAQAR	2	SIVDVGLAQAR2	38694.3	41477.7	45870.4
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	SIVDYKPNLDLLEQQHQLIQEALIFDNK	SIVDYKPNLDLLEQQHQLIQEALIFDNK	4	SIVDYKPNLDLLEQQHQLIQEALIFDNK4	31821.6	31549.2	39345.7
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	SIVETILIYK	SIVETILIYK	2	SIVETILIYK2	29205.6	18279.5	18457.6
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	SIVGMTMYNQATQEIAKPSELLTSVR	SIVGMTMYNQATQEIAKPSELLTSVR	3	SIVGMTMYNQATQEIAKPSELLTSVR3	26488.7	23474.7	37850.5
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	SIVIHWQPPSSATQNGQITGYK	SIVIHWQPPSSATQNGQITGYK	3	SIVIHWQPPSSATQNGQITGYK3	59141.7	63531.3	59392.5
F1LM66	F1LM66	F1LM66_RAT	Eftud2	116 kDa U5 small nuclear ribonucleoprotein component	1	SIVIRPLEPQPAPHLAR	SIVIRPLEPQPAPHLAR	4	SIVIRPLEPQPAPHLAR4	5940.85		
A0A0G2JZA7	A0A0G2JZA7	A0A0G2JZA7_RAT	Cemip2	hyaluronoglucosaminidase	1	SIVLLSTR	SIVLLSTR	2	SIVLLSTR2	7005.95	7294.87	6381.41
Q9ES71	Q9ES71	GNPAT_RAT	Gnpat	Dihydroxyacetone phosphate acyltransferase	1	SIVLNSEEINYVIK	SIVLNSEEINYVIK	2	SIVLNSEEINYVIK2	4508.67	2482.59	1626.58
A0A8I5ZU99	A0A8I5ZU99	A0A8I5ZU99_RAT	Ppm1l	Protein phosphatase, Mg2+/Mn2+ dependent, 1L	1	SIVLQSFYR	SIVLQSFYR	2	SIVLQSFYR2	27407.3	26112.2	37469.2
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	SIVMYACTK	SIVMYAC(UniMod:4)TK	2	SIVMYAC(UniMod:4)TK2	11604.4	17063.8	17294.9
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	SIVNYKPK	SIVNYKPK	1	SIVNYKPK1	11295.1	18190.4	16844.6
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	SIVNYKPK	SIVNYKPK	2	SIVNYKPK2	1.87797e+06	2.09558e+06	1.76208e+06
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	SIVQCVNDFR	SIVQC(UniMod:4)VNDFR	2	SIVQC(UniMod:4)VNDFR2	23566.3	25034	29446.5
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	SIVQGCHNSAELTAEITTACTYR	SIVQGC(UniMod:4)HNSAELTAEITTAC(UniMod:4)TYR	3	SIVQGC(UniMod:4)HNSAELTAEITTAC(UniMod:4)TYR3	23059.9	23142	17826.6
P08650	P08650	CO5_RAT	C5	Complement C5	1	SIVSALK	SIVSALK	1	SIVSALK1	5240.85	1333.05	2568.17
P08650	P08650	CO5_RAT	C5	Complement C5	1	SIVSALKR	SIVSALKR	2	SIVSALKR2	51752	31036.5	34938.3
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	SIVSELAGLLSAMEYVQK	SIVSELAGLLSAMEYVQK	2	SIVSELAGLLSAMEYVQK2	6659.26	3115.29	
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	SIVSESDVSSFEIQHSGFVK	SIVSESDVSSFEIQHSGFVK	3	SIVSESDVSSFEIQHSGFVK3	6535.99	9947.46	10184.4
F1M2D4	F1M2D4	F1M2D4_RAT	Arhgap23	Rho GTPase activating protein 23	1	SIVSGYSTLSTMDR	SIVSGYSTLSTMDR	2	SIVSGYSTLSTMDR2		3533.98	4784.06
D3ZES2	D3ZES2	D3ZES2_RAT	Trappc6b	Trafficking protein particle complex subunit 6B	1	SIVTAEVSSMPACK	SIVTAEVSSMPAC(UniMod:4)K	2	SIVTAEVSSMPAC(UniMod:4)K2	19230.8	11463.7	13694.8
D3ZES2	D3ZES2	D3ZES2_RAT	Trappc6b	Trafficking protein particle complex subunit 6B	1	SIVTAEVSSMPACK	SIVTAEVSSMPAC(UniMod:4)K	3	SIVTAEVSSMPAC(UniMod:4)K3	12104.8	10452.3	9381.01
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	SIVTDLVSQMDPHGR	SIVTDLVSQMDPHGR	2	SIVTDLVSQMDPHGR2	26473.7	16220.8	22569.5
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	SIVTDLVSQMDPHGR	SIVTDLVSQMDPHGR	3	SIVTDLVSQMDPHGR3	45489.2	44890.8	52602.6
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	SIVTDLVSQMDPHGRR	SIVTDLVSQMDPHGRR	4	SIVTDLVSQMDPHGRR4	3522.02	13808.2	13310.3
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	SIVTLSMAK	SIVTLSMAK	2	SIVTLSMAK2	21893.8	22339	23679.6
A0A8I6A5X2	A0A8I6A5X2	A0A8I6A5X2_RAT	Usp32	ubiquitinyl hydrolase 1	1	SIVVDLFHGQLR	SIVVDLFHGQLR	3	SIVVDLFHGQLR3	6273.52	11587.2	5463.59
Q8R490	Q8R490	Q8R490_RAT	Cdh13	Cadherin 13	1	SIVVSPILIPENQR	SIVVSPILIPENQR	2	SIVVSPILIPENQR2	20712.5	12903.8	14907.5
Q9JKU3	Q9JKU3	IF172_RAT	Ift172	Intraflagellar transport protein 172 homolog	1	SIWEEAKPK	SIWEEAKPK	2	SIWEEAKPK2	20083.1	21735.8	26131.7
Q498R3	Q498R3	DJC10_RAT	Dnajc10	DnaJ homolog subfamily C member 10	1	SIWEEQINSR	SIWEEQINSR	2	SIWEEQINSR2	13541	7271.28	11039.2
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	SIYCTSK	SIYC(UniMod:4)TSK	1	SIYC(UniMod:4)TSK1	1698.85	1339.17	
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	SIYCTSK	SIYC(UniMod:4)TSK	2	SIYC(UniMod:4)TSK2	87688.8	107935	48663.8
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	SIYEFLSAEK	SIYEFLSAEK	2	SIYEFLSAEK2	4433.47	4427.53	8495.78
Q569B7	Q569B7	RWDD4_RAT	Rwdd4	RWD domain-containing protein 4	1	SIYEGDESFR	SIYEGDESFR	2	SIYEGDESFR2	29908.8	29979.5	30043.2
Q5U2V8	Q5U2V8	EMC3_RAT	Emc3	ER membrane protein complex subunit 3	1	SIYSLILGQDNAADQSR	SIYSLILGQDNAADQSR	2	SIYSLILGQDNAADQSR2	5313.63	3228.56	3642.43
Q5U2V8	Q5U2V8	EMC3_RAT	Emc3	ER membrane protein complex subunit 3	1	SIYSLILGQDNAADQSR	SIYSLILGQDNAADQSR	3	SIYSLILGQDNAADQSR3		1783.55	2912.24
P34058	P34058;A0A8I5ZYT7	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	SIYYITGESK	SIYYITGESK	2	SIYYITGESK2	2.3613e+06	2.6174e+06	2.57771e+06
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	SKDKEDLVCSAALHSPQESPVGK	SKDKEDLVC(UniMod:4)SAALHSPQESPVGK	4	SKDKEDLVC(UniMod:4)SAALHSPQESPVGK4	12625.6	9857.89	14443.8
Q66H91	Q66H91	GIT2_RAT	Git2	ARF GTPase-activating protein GIT2	1	SKDNVELILR	SKDNVELILR	3	SKDNVELILR3	1978.92		3629.73
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	SKDPDILFMR	SKDPDILFMR	3	SKDPDILFMR3	10899.3	14792.3	10899.6
A0A8I5YCC4	A0A8I5YCC4	A0A8I5YCC4_RAT	Rcsd1	RCSD domain containing 1	1	SKDPGSPQPNQEAGADRVEGTLR	SKDPGSPQPNQEAGADRVEGTLR	4	SKDPGSPQPNQEAGADRVEGTLR4	3347.66	4777.06	10957.1
A0A8J8XQI9	A0A8J8XQI9	A0A8J8XQI9_RAT	Bche	Carboxylic ester hydrolase	1	SKDPQEILLNEK	SKDPQEILLNEK	3	SKDPQEILLNEK3	7714.55	12621.4	13282.6
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	SKDPSGLLISVIR	SKDPSGLLISVIR	2	SKDPSGLLISVIR2	13611.6	9018.22	10329.9
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	SKDPSGLLISVIR	SKDPSGLLISVIR	3	SKDPSGLLISVIR3	29806.7	46161.5	38503
P61023	A0A8I6AT96;P61023	CHP1_RAT	Chp1	Calcineurin B homologous protein 1	0	SKDVNGPEPLNSR	SKDVNGPEPLNSR	3	SKDVNGPEPLNSR3	12243.7	12050.6	11385.9
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	SKDVVEPLLR	SKDVVEPLLR	3	SKDVVEPLLR3	4048.99		2827.56
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	SKDVVEPLLRPQWYVR	SKDVVEPLLRPQWYVR	3	SKDVVEPLLRPQWYVR3	37103.3	21667.3	37144.2
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	SKDVVEPLLRPQWYVR	SKDVVEPLLRPQWYVR	4	SKDVVEPLLRPQWYVR4	63004.4	105948	82255.5
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	SKEAWDAGK	SKEAWDAGK	2	SKEAWDAGK2	5999.65	4244.8	2967.5
P08721	P08721	OSTP_RAT	Spp1	Osteopontin	1	SKEDDRYLK	SKEDDRYLK	3	SKEDDRYLK3	27461.6	32827.5	27508.7
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SKEIPEAR	SKEIPEAR	2	SKEIPEAR2	247354	281348	324374
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	SKENISLLEK	SKENISLLEK	3	SKENISLLEK3	15871.7	11475.9	16029.6
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	SKENVLYK	SKENVLYK	2	SKENVLYK2	7464.53	8687.17	8217.72
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	SKEPAYIR	SKEPAYIR	2	SKEPAYIR2	85708.6	80689.3	71053
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	SKEPIALGTWVR	SKEPIALGTWVR	2	SKEPIALGTWVR2	3689.24		10658.5
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	SKEPIALGTWVR	SKEPIALGTWVR	3	SKEPIALGTWVR3	9913.29	23461.5	19027.9
P26431	P26431	SL9A1_RAT	Slc9a1	Sodium/hydrogen exchanger 1	1	SKEPQLIAFYHK	SKEPQLIAFYHK	3	SKEPQLIAFYHK3	63995.2	72096.1	70532.9
P26431	P26431	SL9A1_RAT	Slc9a1	Sodium/hydrogen exchanger 1	1	SKEPSSPGTDDVFTPGPSDSPGSQR	SKEPSSPGTDDVFTPGPSDSPGSQR	3	SKEPSSPGTDDVFTPGPSDSPGSQR3	27061.5	36284.7	33668.4
D3ZBW5	D3ZBW5	D3ZBW5_RAT	LOC685203	Small membrane A-kinase anchor protein	1	SKETFPFPTTLDIDK	SKETFPFPTTLDIDK	3	SKETFPFPTTLDIDK3			5138.31
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	SKEVFGCMK	SKEVFGC(UniMod:4)MK	2	SKEVFGC(UniMod:4)MK2	13505.4	8911.86	9993.16
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	SKGDQPLCNIPIENILAVER	SKGDQPLC(UniMod:4)NIPIENILAVER	3	SKGDQPLC(UniMod:4)NIPIENILAVER3	4066.54	2786.82	
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	SKIPAHLR	SKIPAHLR	2	SKIPAHLR2	15128	30568.9	19471.1
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	SKLLSTLCSADVCQCAEGK	SKLLSTLC(UniMod:4)SADVC(UniMod:4)QC(UniMod:4)AEGK	3	SKLLSTLC(UniMod:4)SADVC(UniMod:4)QC(UniMod:4)AEGK3	3616.1	7087.3	3264.61
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	SKLLSTLCSADVCQCAEGKCPR	SKLLSTLC(UniMod:4)SADVC(UniMod:4)QC(UniMod:4)AEGKC(UniMod:4)PR	4	SKLLSTLC(UniMod:4)SADVC(UniMod:4)QC(UniMod:4)AEGKC(UniMod:4)PR4	3884.84	11930.2	6624.97
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	SKLLTVWLPDSLTTWEIHGVSLSK	SKLLTVWLPDSLTTWEIHGVSLSK	4	SKLLTVWLPDSLTTWEIHGVSLSK4	17920.2	10467.7	10871.9
Q8R491	Q8R491	EHD3_RAT	Ehd3	EH domain-containing protein 3	1	SKLPNSVLGK	SKLPNSVLGK	2	SKLPNSVLGK2	79950.8	84387.4	64897.1
Q641Z6	Q641Z6	EHD1_RAT	Ehd1	EH domain-containing protein 1	1	SKLPNTVLGK	SKLPNTVLGK	2	SKLPNTVLGK2	2213.79	7577.71	
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	SKMEEQTQQIR	SKMEEQTQQIR	2	SKMEEQTQQIR2	6806.17	1964.06	4847.53
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	SKMEEQTQQIR	SKMEEQTQQIR	3	SKMEEQTQQIR3	22869.2	38560	8492.38
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	SKNSQNPNSEAVLLPVAVR	SKNSQNPNSEAVLLPVAVR	3	SKNSQNPNSEAVLLPVAVR3	47291.3	58140.5	66150.3
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	SKPAPESPSNAVALAEWASIR	SKPAPESPSNAVALAEWASIR	3	SKPAPESPSNAVALAEWASIR3	172413	156640	184812
F1LQ48	F1LQ48	HNRPL_RAT	Hnrnpl	Heterogeneous nuclear ribonucleoprotein L	1	SKPGAAMVEMADGYAVDR	SKPGAAMVEMADGYAVDR	3	SKPGAAMVEMADGYAVDR3	5550.05	2969.53	4373.52
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	SKPGQFIR	SKPGQFIR	2	SKPGQFIR2	172599	109500	119523
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	SKPIPIMPASPQK	SKPIPIMPASPQK	2	SKPIPIMPASPQK2	29654.3	25286.4	13665
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	SKPIPIMPASPQK	SKPIPIMPASPQK	3	SKPIPIMPASPQK3	143733	128444	143757
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	SKPLDNASK	SKPLDNASK	2	SKPLDNASK2			17573.6
Q6DGG9	Q6DGG9	CAMLG_RAT	Camlg	Guided entry of tail-anchored proteins factor CAMLG	1	SKPLDSDILNPLGVPSVSK	SKPLDSDILNPLGVPSVSK	3	SKPLDSDILNPLGVPSVSK3	7853.14	8543.17	7595.66
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	SKPLTLLEYNLTMDTAK	SKPLTLLEYNLTMDTAK	3	SKPLTLLEYNLTMDTAK3	3271.07	3631.35	
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	SKPMKEDNNLSLQEK	SKPMKEDNNLSLQEK	3	SKPMKEDNNLSLQEK3	19104.3	21141.4	19037.9
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	SKPMKEDNNLSLQEK	SKPMKEDNNLSLQEK	4	SKPMKEDNNLSLQEK4	11167.6	19172.2	18685.6
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	SKPSAASPKPGALK	SKPSAASPKPGALK	3	SKPSAASPKPGALK3	4506.26	12089.4	6664.89
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	SKPSYHAPEPKPHYDPADR	SKPSYHAPEPKPHYDPADR	4	SKPSYHAPEPKPHYDPADR4	14536.9	12985.7	10472.4
Q6AYD4	Q6AYD4	ESAM_RAT	Esam	Endothelial cell-selective adhesion molecule	1	SKPTAQYQWER	SKPTAQYQWER	2	SKPTAQYQWER2	82566.6	75767.7	97192.3
Q6AYD4	Q6AYD4	ESAM_RAT	Esam	Endothelial cell-selective adhesion molecule	1	SKPTAQYQWER	SKPTAQYQWER	3	SKPTAQYQWER3	180576	153687	250648
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	SKPTVDIVNQNGETALDIAK	SKPTVDIVNQNGETALDIAK	3	SKPTVDIVNQNGETALDIAK3	8327.75	15186	19208.2
Q9Z2P6	Q9Z2P6	SNP29_RAT	Snap29	Synaptosomal-associated protein 29	1	SKPVEPPPEQNGSIVPQPSSR	SKPVEPPPEQNGSIVPQPSSR	3	SKPVEPPPEQNGSIVPQPSSR3	15600.1	24094.4	14047.7
Q9WVA1	Q9WVA1	TIM8A_RAT	Timm8a	Mitochondrial import inner membrane translocase subunit Tim8 A	1	SKPVFSESLSD	SKPVFSESLSD	2	SKPVFSESLSD2	13524.7	23996	19774.8
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	SKSPAYTLVWTR	SKSPAYTLVWTR	2	SKSPAYTLVWTR2	3661.59	6030.37	3572.93
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	SKSPAYTLVWTR	SKSPAYTLVWTR	3	SKSPAYTLVWTR3	19271.5	31496.5	24259
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	SKSPPVEFMR	SKSPPVEFMR	2	SKSPPVEFMR2	4191.59	4943.62	7107.61
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	SKSPPVEFMR	SKSPPVEFMR	3	SKSPPVEFMR3	19973.5	27972.8	22135.4
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	SLAAALDILNSATR	SLAAALDILNSATR	2	SLAAALDILNSATR2	108389	82505.9	84286.7
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	SLAAALDILNSATR	SLAAALDILNSATR	3	SLAAALDILNSATR3	16038.8	9235.16	22734
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	SLAAEAENSQHQK	SLAAEAENSQHQK	2	SLAAEAENSQHQK2	12726.3	4703.7	5219.01
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	SLAAEAENSQHQK	SLAAEAENSQHQK	3	SLAAEAENSQHQK3	48577.1	68680.3	66536.6
P30427	P30427	PLEC_RAT	Plec	Plectin	1	SLAAEEEAAR	SLAAEEEAAR	2	SLAAEEEAAR2	9770.34	7690.72	7243.73
Q64591	Q64591	DECR_RAT	Decr1	2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], mitochondrial	1	SLAAEWGR	SLAAEWGR	2	SLAAEWGR2	34254.9	31016	27397.9
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	SLAANLQLR	SLAANLQLR	2	SLAANLQLR2	73783.8	89565.2	63982.3
D4A8N1	D4A8N1	D4A8N1_RAT	Dpm1	Dolichol-phosphate mannosyltransferase subunit 1	1	SLAASQRPPQGR	SLAASQRPPQGR	3	SLAASQRPPQGR3	121012	106092	112214
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	SLAAYTAACQASGAAVK	SLAAYTAAC(UniMod:4)QASGAAVK	2	SLAAYTAAC(UniMod:4)QASGAAVK2	7202.07	4902.03	4264.59
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	SLAAYTAACQASGAAVK	SLAAYTAAC(UniMod:4)QASGAAVK	3	SLAAYTAAC(UniMod:4)QASGAAVK3	7845.53	9267.63	8184.35
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	SLAAYTAACQASGAAVKPWR	SLAAYTAAC(UniMod:4)QASGAAVKPWR	3	SLAAYTAAC(UniMod:4)QASGAAVKPWR3	1.53162e+06	1.54707e+06	1.49108e+06
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	SLAAYTAACQASGAAVKPWR	SLAAYTAAC(UniMod:4)QASGAAVKPWR	4	SLAAYTAAC(UniMod:4)QASGAAVKPWR4	36347.2	39076.8	27565.8
P42123	P42123	LDHB_RAT	Ldhb	L-lactate dehydrogenase B chain	1	SLADELALVDVLEDK	SLADELALVDVLEDK	2	SLADELALVDVLEDK2		5033.75	
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	SLADFEK	SLADFEK	1	SLADFEK1	2955.73		2431.95
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	SLADFEK	SLADFEK	2	SLADFEK2	221495	241391	341010
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	SLADGILLCK	SLADGILLC(UniMod:4)K	2	SLADGILLC(UniMod:4)K2	220994	193160	192273
P18422	P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	1	SLADIAR	SLADIAR	1	SLADIAR1	28938.4	25208.7	23070.8
Q6P777	Q6P777	MB12A_RAT	Mvb12a	Multivesicular body subunit 12A	1	SLADIEKEYNYGFVVEK	SLADIEKEYNYGFVVEK	3	SLADIEKEYNYGFVVEK3	8936.66	9289.53	14472
D3ZG43	D3ZG43	D3ZG43_RAT	Ndufs3	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial	1	SLADLTAVDVPTR	SLADLTAVDVPTR	2	SLADLTAVDVPTR2	61588.5	49468.4	63526.6
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	SLADVDTILAHTMGDVR	SLADVDTILAHTMGDVR	3	SLADVDTILAHTMGDVR3	12637.1	13496.9	11411.1
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	SLADVESQVSVQNQEK	SLADVESQVSVQNQEK	2	SLADVESQVSVQNQEK2	10300	13016.2	9056.43
A0A8I5ZU57	A0A8I5ZU57	A0A8I5ZU57_RAT	Ccny	Cyclin Y	1	SLAEANSLSFPLEPLSR	SLAEANSLSFPLEPLSR	2	SLAEANSLSFPLEPLSR2	20488	23048.3	18705.5
A0A8I5ZU57	A0A8I5ZU57	A0A8I5ZU57_RAT	Ccny	Cyclin Y	1	SLAEANSLSFPLEPLSR	SLAEANSLSFPLEPLSR	3	SLAEANSLSFPLEPLSR3	3944.76	4043.99	
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	SLAEDFAEQPIK	SLAEDFAEQPIK	2	SLAEDFAEQPIK2	204976	264453	267414
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	SLAEDFAEQPIK	SLAEDFAEQPIK	3	SLAEDFAEQPIK3	12216.5	14978.5	10532.4
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	SLAEDFAEQPIKDAVITVPAFFNQAER	SLAEDFAEQPIKDAVITVPAFFNQAER	4	SLAEDFAEQPIKDAVITVPAFFNQAER4	41223.1	28306	27117.7
Q9Z1A5	Q9Z1A5	ULA1_RAT	Nae1	NEDD8-activating enzyme E1 regulatory subunit	1	SLAEEYGLHTVNK	SLAEEYGLHTVNK	3	SLAEEYGLHTVNK3	12978.9	9541.55	10049.8
P35446	P35446	SPON1_RAT	Spon1	Spondin-1	1	SLAELGDCNEDLEQAEK	SLAELGDC(UniMod:4)NEDLEQAEK	2	SLAELGDC(UniMod:4)NEDLEQAEK2	4247.12	5024.26	5549.09
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	SLAELTACSIELFHK	SLAELTAC(UniMod:4)SIELFHK	2	SLAELTAC(UniMod:4)SIELFHK2	3838.96		
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	SLAELTACSIELFHK	SLAELTAC(UniMod:4)SIELFHK	3	SLAELTAC(UniMod:4)SIELFHK3	20190	15645.3	11876.6
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	SLAEMESSHQQVMEQLQR	SLAEMESSHQQVMEQLQR	3	SLAEMESSHQQVMEQLQR3	83838.6	71385.4	76412
Q9QX69	Q9QX69	LANC1_RAT	Lancl1	Glutathione S-transferase LANCL1	1	SLAENYFDSTGR	SLAENYFDSTGR	2	SLAENYFDSTGR2	4613.83	6560.2	2132.49
B5DFF4	B5DFF4	B5DFF4_RAT	Vps37c	VPS37C subunit of ESCRT-I	1	SLAEQNLEFQGPLEISR	SLAEQNLEFQGPLEISR	2	SLAEQNLEFQGPLEISR2	8018.15	6962.97	4517.82
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	SLAESELR	SLAESELR	2	SLAESELR2	291536	261868	315320
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	SLAGFQDSILTDK	SLAGFQDSILTDK	2	SLAGFQDSILTDK2	20060.2	24604.4	30749.8
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	SLAGPPAER	SLAGPPAER	2	SLAGPPAER2	119606	102296	104977
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	SLAGSSGPGASSGPGGDHSDLIVR	SLAGSSGPGASSGPGGDHSDLIVR	3	SLAGSSGPGASSGPGGDHSDLIVR3	602451	556171	600033
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	SLAHADEAR	SLAHADEAR	2	SLAHADEAR2			6272.36
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	SLAHLAAPVQSK	SLAHLAAPVQSK	2	SLAHLAAPVQSK2	12723	4943.42	10349.7
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	SLAHLAAPVQSK	SLAHLAAPVQSK	3	SLAHLAAPVQSK3	106696	109540	107812
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	SLAILESMVLNSHDLYQK	SLAILESMVLNSHDLYQK	3	SLAILESMVLNSHDLYQK3	28031.9	18723.2	18565.6
O35152	O35152	BET1L_RAT	Bet1l	BET1-like protein	1	SLALDIDRDTEDQNR	SLALDIDRDTEDQNR	3	SLALDIDRDTEDQNR3	40931.2	37639.4	51426.8
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	SLALVAHTGYLPHQQDPHR	SLALVAHTGYLPHQQDPHR	4	SLALVAHTGYLPHQQDPHR4	7918.14	5452.41	10670.6
P14604	P14604	ECHM_RAT	Echs1	Enoyl-CoA hydratase, mitochondrial	1	SLAMEMVLTGDR	SLAMEMVLTGDR	2	SLAMEMVLTGDR2	32097.6	30704.8	26837.1
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	SLAMLGSSEDNTALSR	SLAMLGSSEDNTALSR	2	SLAMLGSSEDNTALSR2	130311	116441	115765
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	SLAMTKPDR	SLAMTKPDR	2	SLAMTKPDR2	42863.6	51529.8	36880.7
P36953	P36953	AFAM_RAT	Afm	Afamin	1	SLAMVQQECK	SLAMVQQEC(UniMod:4)K	2	SLAMVQQEC(UniMod:4)K2	353726	320014	316967
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	SLANVILGGYGTTSTAGGK	SLANVILGGYGTTSTAGGK	2	SLANVILGGYGTTSTAGGK2	5320.08	5424.54	4736.21
D3ZKN4	D3ZKN4	D3ZKN4_RAT	Whamm	WASP homolog associated with actin, golgi membranes and microtubules	1	SLAPDLELHLGDNR	SLAPDLELHLGDNR	3	SLAPDLELHLGDNR3	3481.11		
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	SLAPPLDR	SLAPPLDR	2	SLAPPLDR2	94825.8	52851.9	81184.5
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	SLAPPLDREPLLGK	SLAPPLDREPLLGK	2	SLAPPLDREPLLGK2	80608.6	69623.3	65849.3
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	SLAPPLDREPLLGK	SLAPPLDREPLLGK	3	SLAPPLDREPLLGK3	1.55368e+06	1.4652e+06	1.79666e+06
D3ZKR8	D3ZKR8	D3ZKR8_RAT	Tmem167a	Protein kish	1	SLAPSILDR	SLAPSILDR	2	SLAPSILDR2	94458.2	86648.4	107159
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	SLAPTAASK	SLAPTAASK	1	SLAPTAASK1	4.52038e+06	4.05749e+06	3.92585e+06
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	SLAPTAASK	SLAPTAASK	2	SLAPTAASK2	84730	126646	90280.1
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	SLAPTAASKR	SLAPTAASKR	2	SLAPTAASKR2	153967	170496	143807
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	SLAPTAASKRK	SLAPTAASKRK	2	SLAPTAASKRK2			17531
Q63433	Q63433	PKN1_RAT	Pkn1	Serine/threonine-protein kinase N1	1	SLAPVELLLR	SLAPVELLLR	2	SLAPVELLLR2	6871.23	10690.2	11980.4
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	SLAQEALR	SLAQEALR	2	SLAQEALR2	32691.7	23579	33791.6
B1H219	B1H219	B1H219_RAT	Dkk3	Dickkopf WNT signaling pathway inhibitor 3	1	SLAQEMAFEEATPVDSLGGEKI	SLAQEMAFEEATPVDSLGGEKI	3	SLAQEMAFEEATPVDSLGGEKI3	526547	576634	553325
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	SLAQHIPGPGGIEGVK	SLAQHIPGPGGIEGVK	2	SLAQHIPGPGGIEGVK2	16757.4	11470	9411.03
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	SLAQHIPGPGGIEGVK	SLAQHIPGPGGIEGVK	3	SLAQHIPGPGGIEGVK3	75819.9	80440.3	79162.7
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	SLAQLQESQLK	SLAQLQESQLK	2	SLAQLQESQLK2	10510.7	9466.87	12438.9
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	SLAQSWR	SLAQSWR	2	SLAQSWR2	13821.3	17500.1	19069.3
A0A8I6ATM7	A0A8I6ATM7	A0A8I6ATM7_RAT	Gpn1	GPN-loop GTPase	1	SLASAQSNEQK	SLASAQSNEQK	2	SLASAQSNEQK2	4146.5		5085.76
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	SLASQFK	SLASQFK	2	SLASQFK2	118666	175832	161156
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	SLASSCPEELSR	SLASSC(UniMod:4)PEELSR	2	SLASSC(UniMod:4)PEELSR2	76622.4	88649.2	79099.9
Q9EQL9	Q9EQL9	SHRPN_RAT	Sharpin	Sharpin	1	SLASYGVSQDGDPAFLYLLSAPR	SLASYGVSQDGDPAFLYLLSAPR	3	SLASYGVSQDGDPAFLYLLSAPR3	7310.22		
Q793F9	Q793F9	VPS4A_RAT	Vps4a	Vacuolar protein sorting-associated protein 4A	1	SLATTRPTVNADDLLK	SLATTRPTVNADDLLK	3	SLATTRPTVNADDLLK3	27518.7	33725.4	51218.6
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	SLAVMSMVGYILGLGDRHPSNLMLDR	SLAVMSMVGYILGLGDRHPSNLMLDR	4	SLAVMSMVGYILGLGDRHPSNLMLDR4		2650.26	
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	SLAVQRPASLEK	SLAVQRPASLEK	3	SLAVQRPASLEK3	61061.3	104902	86465.1
P18266	P18266	GSK3B_RAT	Gsk3b	Glycogen synthase kinase-3 beta	1	SLAYIHSFGICHR	SLAYIHSFGIC(UniMod:4)HR	4	SLAYIHSFGIC(UniMod:4)HR4	5522.39	7392.78	1920.92
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	SLAYLTAATHGLDEEAESLK	SLAYLTAATHGLDEEAESLK	3	SLAYLTAATHGLDEEAESLK3	200134	184398	179780
P0C5W1	P0C5W1	MAP1S_RAT	Map1s	Microtubule-associated protein 1S	1	SLCDELR	SLC(UniMod:4)DELR	2	SLC(UniMod:4)DELR2	33432.2	34950.1	22488.7
Q9QZL2	Q9QZL2	CHST3_RAT	Chst3	Carbohydrate sulfotransferase 3	1	SLCEDPVCTPFVK	SLC(UniMod:4)EDPVC(UniMod:4)TPFVK	2	SLC(UniMod:4)EDPVC(UniMod:4)TPFVK2	14855.7	12924.7	18847.1
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	SLCEQVSHHPPAAAHHAESK	SLC(UniMod:4)EQVSHHPPAAAHHAESK	3	SLC(UniMod:4)EQVSHHPPAAAHHAESK3	13393.4	15692.5	11518.5
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	SLCEQVSHHPPAAAHHAESK	SLC(UniMod:4)EQVSHHPPAAAHHAESK	4	SLC(UniMod:4)EQVSHHPPAAAHHAESK4	29136.3	47871.1	36666.2
Q5PQQ8	Q5PQQ8	ITGBL_RAT	Itgbl1	Integrin beta-like protein 1	1	SLCESADGTLCSGK	SLC(UniMod:4)ESADGTLC(UniMod:4)SGK	2	SLC(UniMod:4)ESADGTLC(UniMod:4)SGK2	16803.1	12387.6	21902.4
Q6ZXC7	Q6ZXC7	Q6ZXC7_RAT	St8sia6	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6	1	SLCGAEIDK	SLC(UniMod:4)GAEIDK	2	SLC(UniMod:4)GAEIDK2	15609.6	19740.9	15215.8
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	SLCHYDDSVLLGSWLQETDHK	SLC(UniMod:4)HYDDSVLLGSWLQETDHK	4	SLC(UniMod:4)HYDDSVLLGSWLQETDHK4	10323.2	4285.83	4984.88
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	SLCIPFNPLCELQPGAMCVCGK	SLC(UniMod:4)IPFNPLC(UniMod:4)ELQPGAMC(UniMod:4)VC(UniMod:4)GK	3	SLC(UniMod:4)IPFNPLC(UniMod:4)ELQPGAMC(UniMod:4)VC(UniMod:4)GK3	55164.4	41072.9	54115.1
D3ZUX7	D3ZUX7	D3ZUX7_RAT	Acsf3	Acyl-CoA synthetase family member 3	1	SLCLAQEICSLR	SLC(UniMod:4)LAQEIC(UniMod:4)SLR	2	SLC(UniMod:4)LAQEIC(UniMod:4)SLR2	6683.62	6388.09	2937.84
Q641Z9	Q641Z9	Q641Z9_RAT	Sdhc	Succinate dehydrogenase cytochrome b560 subunit, mitochondrial	1	SLCLGPALIHAAK	SLC(UniMod:4)LGPALIHAAK	2	SLC(UniMod:4)LGPALIHAAK2	6485.58		
Q641Z9	Q641Z9	Q641Z9_RAT	Sdhc	Succinate dehydrogenase cytochrome b560 subunit, mitochondrial	1	SLCLGPALIHAAK	SLC(UniMod:4)LGPALIHAAK	3	SLC(UniMod:4)LGPALIHAAK3	36464.6	26082.3	32738.7
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	SLCLVPVTLLLSNCSK	SLC(UniMod:4)LVPVTLLLSNC(UniMod:4)SK	2	SLC(UniMod:4)LVPVTLLLSNC(UniMod:4)SK2	10181.4	13328.3	8814.67
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	SLCLVPVTLLLSNCSK	SLC(UniMod:4)LVPVTLLLSNC(UniMod:4)SK	3	SLC(UniMod:4)LVPVTLLLSNC(UniMod:4)SK3	9431.85	3760.74	6249.13
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	SLCNTVIPIIPLQPQK	SLC(UniMod:4)NTVIPIIPLQPQK	2	SLC(UniMod:4)NTVIPIIPLQPQK2	51690.3	53519.3	36026.2
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	SLCNTVIPIIPLQPQK	SLC(UniMod:4)NTVIPIIPLQPQK	3	SLC(UniMod:4)NTVIPIIPLQPQK3	25275.1	22652.7	22614.8
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	SLCPETWPVWTGR	SLC(UniMod:4)PETWPVWTGR	2	SLC(UniMod:4)PETWPVWTGR2	15332.5	10600.2	14337.1
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	SLCPETWPVWTGRPQDGVAVLVR	SLC(UniMod:4)PETWPVWTGRPQDGVAVLVR	3	SLC(UniMod:4)PETWPVWTGRPQDGVAVLVR3	237947	248526	235396
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	SLCPETWPVWTGRPQDGVAVLVR	SLC(UniMod:4)PETWPVWTGRPQDGVAVLVR	4	SLC(UniMod:4)PETWPVWTGRPQDGVAVLVR4	6921.24		5698.98
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	SLCPFYGEDFYCEIPR	SLC(UniMod:4)PFYGEDFYC(UniMod:4)EIPR	3	SLC(UniMod:4)PFYGEDFYC(UniMod:4)EIPR3	93519.6	126192	104702
D3ZA88	D3ZA88	D3ZA88_RAT	Trim34	Tripartite motif-containing 34	1	SLCPMCGNR	SLC(UniMod:4)PMC(UniMod:4)GNR	2	SLC(UniMod:4)PMC(UniMod:4)GNR2	7269.82	9420.69	8842.5
Q4QQT4	Q4QQT4	2AAB_RAT	Ppp2r1b	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	1	SLCSDDTPMVR	SLC(UniMod:4)SDDTPMVR	2	SLC(UniMod:4)SDDTPMVR2	11332.1	5312.13	4925.88
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	SLCTYFSDKDPGGLLLLPEK	SLC(UniMod:4)TYFSDKDPGGLLLLPEK	3	SLC(UniMod:4)TYFSDKDPGGLLLLPEK3	11168.8	9003	14274.9
Q5XIP2	Q5XIP2	Q5XIP2_RAT	Pigk	GPI-anchor transamidase	1	SLCVSTPGHR	SLC(UniMod:4)VSTPGHR	2	SLC(UniMod:4)VSTPGHR2	5289.76	1435.36	
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	SLDAAVAR	SLDAAVAR	2	SLDAAVAR2	54061.9	40631.8	50058.2
F1LR42	F1LR42	F1LR42_RAT	Rufy1	RUN and FYVE domain containing 1	1	SLDADHAPLQQFFVVMEHCLK	SLDADHAPLQQFFVVMEHC(UniMod:4)LK	4	SLDADHAPLQQFFVVMEHC(UniMod:4)LK4		2036.8	1826.77
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	SLDDEEYKPWQYHAVTDTECLTLYNIYPR	SLDDEEYKPWQYHAVTDTEC(UniMod:4)LTLYNIYPR	4	SLDDEEYKPWQYHAVTDTEC(UniMod:4)LTLYNIYPR4	12789.1	12545.5	6907.54
A0A8I5ZRG3	A0A8I5ZRG3	A0A8I5ZRG3_RAT	Frmd4b	FERM domain containing 4B	1	SLDDIAMDLTETGTQR	SLDDIAMDLTETGTQR	2	SLDDIAMDLTETGTQR2		3359.5	3288.97
D4AEG7	D4AEG7	D4AEG7_RAT	Tbc1d13	TBC1 domain family, member 13	1	SLDDSQCGITYK	SLDDSQC(UniMod:4)GITYK	2	SLDDSQC(UniMod:4)GITYK2	4374.87	3356.5	2217.14
P58195	P58195	PLS1_RAT	Plscr1	Phospholipid scramblase 1	1	SLDEESVVGK	SLDEESVVGK	2	SLDEESVVGK2	9293.47	19563.7	11199.6
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	SLDEIDLSALR	SLDEIDLSALR	2	SLDEIDLSALR2	18746.6	11837.1	17543.7
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	SLDESALCVFILK	SLDESALC(UniMod:4)VFILK	2	SLDESALC(UniMod:4)VFILK2	18354.1	15932.2	20706.6
D3ZX08	D3ZX08	SYAM_RAT	Aars2	Alanine--tRNA ligase, mitochondrial	1	SLDEVYPDPVR	SLDEVYPDPVR	2	SLDEVYPDPVR2	4905.35		
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	SLDFLIELLHK	SLDFLIELLHK	2	SLDFLIELLHK2	10181.4	10434.2	7404.21
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	SLDFLIELLHK	SLDFLIELLHK	3	SLDFLIELLHK3	163252	88725.8	95274.2
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	SLDGAAAAESTDR	SLDGAAAAESTDR	2	SLDGAAAAESTDR2	72632.2	105942	100913
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	SLDGAPIGVVDQSLMK	SLDGAPIGVVDQSLMK	2	SLDGAPIGVVDQSLMK2	23144.3	39731.1	
Q5XI07	Q5XI07	LPP_RAT	Lpp	Lipoma-preferred partner homolog	1	SLDGIPFTVDACGLIHCIEDFHK	SLDGIPFTVDAC(UniMod:4)GLIHC(UniMod:4)IEDFHK	4	SLDGIPFTVDAC(UniMod:4)GLIHC(UniMod:4)IEDFHK4	36004.9	38292.5	26368.5
Q5XI07	Q5XI07	LPP_RAT	Lpp	Lipoma-preferred partner homolog	1	SLDGIPFTVDACGLIHCIEDFHKK	SLDGIPFTVDAC(UniMod:4)GLIHC(UniMod:4)IEDFHKK	4	SLDGIPFTVDAC(UniMod:4)GLIHC(UniMod:4)IEDFHKK4	3323.06	15499.7	
D3Z8F6	D3Z8F6	D3Z8F6_RAT	Dennd1b	DENN domain containing 1B	1	SLDGTLYDDDDDIER	SLDGTLYDDDDDIER	2	SLDGTLYDDDDDIER2	5859.04	5919.96	10401.2
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	SLDICHPQER	SLDIC(UniMod:4)HPQER	3	SLDIC(UniMod:4)HPQER3	79853.8	76046.3	69121.1
F1M4U0	F1M4U0	F1M4U0_RAT	Ccnyl1	Cyclin Y-like 1	1	SLDIFDER	SLDIFDER	2	SLDIFDER2	20362.5		28949.6
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	SLDIFTVGGSGDGEVTNSAWETFQR	SLDIFTVGGSGDGEVTNSAWETFQR	3	SLDIFTVGGSGDGEVTNSAWETFQR3	12962.5	11613.1	11911.7
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	SLDIGNQMSTSEETK	SLDIGNQMSTSEETK	2	SLDIGNQMSTSEETK2	6238.48		5111.55
G3V9L1	G3V9L1	G3V9L1_RAT	Tex2	Testis expressed 2	1	SLDIREPEILK	SLDIREPEILK	3	SLDIREPEILK3	18476.6	17542.8	18917
P70541	P70541	EI2BG_RAT	Eif2b3	Translation initiation factor eIF-2B subunit gamma	1	SLDIYSFIK	SLDIYSFIK	2	SLDIYSFIK2	39713.6	15147.1	15335
P11505	P11505	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	1	SLDKDPLLLSGTHVMEGSGR	SLDKDPLLLSGTHVMEGSGR	4	SLDKDPLLLSGTHVMEGSGR4	19889.2	18075.6	23764.9
P14046	Q6IE52;A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	SLDKEAIK	SLDKEAIK	1	SLDKEAIK1	964142	708228	667728
P14046	Q6IE52;A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	SLDKEAIK	SLDKEAIK	2	SLDKEAIK2	63482	50544.7	36673.9
P14046	Q6IE52;A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	SLDKEAIKEDNSIHWER	SLDKEAIKEDNSIHWER	3	SLDKEAIKEDNSIHWER3	304783	231815	201013
P14046	Q6IE52;A0A8I6AG69;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	SLDKEAIKEDNSIHWER	SLDKEAIKEDNSIHWER	4	SLDKEAIKEDNSIHWER4	65291.5	45586.8	47030.1
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	SLDKEAIR	SLDKEAIR	2	SLDKEAIR2	451261	240380	282166
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	SLDLDPSK	SLDLDPSK	2	SLDLDPSK2	98907.9	126744	117347
Q6P6Q2	A0A8I5ZR22;A0A0G2JVA8;A0A8I5ZMI8;Q6P6Q2;A0A0G2JUG1;A0A8I6G380;Q4FZU2;Q6IG05;A0A8I6AP90	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	0	SLDLDSIIAEVK	SLDLDSIIAEVK	2	SLDLDSIIAEVK2	2.70333e+06	2.72617e+06	2.2321e+06
Q6P6Q2	A0A8I5ZR22;A0A0G2JVA8;A0A8I5ZMI8;Q6P6Q2;A0A0G2JUG1;A0A8I6G380;Q4FZU2;Q6IG05;A0A8I6AP90	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	0	SLDLDSIIAEVK	SLDLDSIIAEVK	3	SLDLDSIIAEVK3	85213	70270	81153.3
Q6IG01	Q6IG01	K2C1B_RAT	Krt77	Keratin, type II cytoskeletal 1b	1	SLDLDSIINAVR	SLDLDSIINAVR	2	SLDLDSIINAVR2	15871.9	14614	10522.4
Q9EST6	Q9EST6	AN32B_RAT	Anp32b	Acidic leucine-rich nuclear phosphoprotein 32 family member B	1	SLDLFGCEVTNR	SLDLFGC(UniMod:4)EVTNR	2	SLDLFGC(UniMod:4)EVTNR2	39672.9	37962.4	40698.1
P49911	P49911	AN32A_RAT	Anp32a	Acidic leucine-rich nuclear phosphoprotein 32 family member A	1	SLDLFNCEVTNLNAYR	SLDLFNC(UniMod:4)EVTNLNAYR	2	SLDLFNC(UniMod:4)EVTNLNAYR2	134413	136965	101109
P49911	P49911	AN32A_RAT	Anp32a	Acidic leucine-rich nuclear phosphoprotein 32 family member A	1	SLDLFNCEVTNLNAYR	SLDLFNC(UniMod:4)EVTNLNAYR	3	SLDLFNC(UniMod:4)EVTNLNAYR3	29753.7	23521.9	16395.8
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	SLDLIESLLR	SLDLIESLLR	2	SLDLIESLLR2	6909.65	2736.9	8095.44
Q6AYD0	Q6AYD0	Q6AYD0_RAT	Lrrc17	Leucine rich repeat containing 17	1	SLDLQQNEISK	SLDLQQNEISK	2	SLDLQQNEISK2	16984	12468.2	15169.2
P01015	P01015	ANGT_RAT	Agt	Angiotensinogen	1	SLDLSTDPVLAAQK	SLDLSTDPVLAAQK	2	SLDLSTDPVLAAQK2	401594	400318	381997
P01015	P01015	ANGT_RAT	Agt	Angiotensinogen	1	SLDLSTDPVLAAQK	SLDLSTDPVLAAQK	3	SLDLSTDPVLAAQK3	12572.2	11600.4	16995.7
B3GNI6	B0BNF1;A0A8I6AA08;B3GNI6	SEP11_RAT	Septin11	Septin-11	0	SLDLVTMK	SLDLVTMK	2	SLDLVTMK2	286798	262982	255289
Q5M936	Q5M936	TOR3A_RAT	Tor3a	Torsin-3A	1	SLDMLTSWFCR	SLDMLTSWFC(UniMod:4)R	2	SLDMLTSWFC(UniMod:4)R2	9641.28	12098.6	14370.5
Q5XIM5	Q5XIM5	CDV3_RAT	Cdv3	Protein CDV3 homolog	1	SLDNFFAK	SLDNFFAK	2	SLDNFFAK2	32131.7	37662.9	29956.5
Q07014	Q4KM97;Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	0	SLDNGGYYISPR	SLDNGGYYISPR	2	SLDNGGYYISPR2	438276	431514	511680
Q07014	Q4KM97;Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	0	SLDNGGYYISPR	SLDNGGYYISPR	3	SLDNGGYYISPR3	33598.1	31082.8	37987
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	SLDNNYSTLNER	SLDNNYSTLNER	2	SLDNNYSTLNER2	21817.8	15175.3	22055.2
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	SLDPFKPFIIFSNR	SLDPFKPFIIFSNR	2	SLDPFKPFIIFSNR2	16664.8	6282.21	7828.04
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	SLDPFKPFIIFSNR	SLDPFKPFIIFSNR	3	SLDPFKPFIIFSNR3	160112	237053	307511
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	SLDQAISR	SLDQAISR	2	SLDQAISR2	69337.5	97177.3	78798.6
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	SLDSFPEDFCR	SLDSFPEDFC(UniMod:4)R	2	SLDSFPEDFC(UniMod:4)R2	7683.72	6742.04	11832.3
A0A8I6ABQ2	A0A8I6ABQ2	A0A8I6ABQ2_RAT	Bcl2l13	BCL2 like 13	1	SLDSSGAGEK	SLDSSGAGEK	2	SLDSSGAGEK2			15392.3
Q6MG59	Q6MG59	G6B_RAT	Mpig6b	Megakaryocyte and platelet inhibitory receptor G6b	1	SLDTGIK	SLDTGIK	1	SLDTGIK1	18484.5	16363.7	21843.6
Q6MG59	Q6MG59	G6B_RAT	Mpig6b	Megakaryocyte and platelet inhibitory receptor G6b	1	SLDTGIKR	SLDTGIKR	2	SLDTGIKR2	6236.4	10070.6	
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	SLDTHVTNNLHSIIR	SLDTHVTNNLHSIIR	3	SLDTHVTNNLHSIIR3	2668.69	5061.07	5381.38
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	SLDTHVTNNLHSIIR	SLDTHVTNNLHSIIR	4	SLDTHVTNNLHSIIR4	12037.7	13214.6	7221.36
D3ZXB1	D3ZXB1	D3ZXB1_RAT	Map4k2	Mitogen-activated protein kinase kinase kinase kinase 2	1	SLDTNEVTQEITDETR	SLDTNEVTQEITDETR	2	SLDTNEVTQEITDETR2	2451.37	8786.32	3913.54
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	SLDTTLQFPYKEPER	SLDTTLQFPYKEPER	3	SLDTTLQFPYKEPER3	16484.1	24629.8	13402
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	SLDTTLQFPYKEPERR	SLDTTLQFPYKEPERR	3	SLDTTLQFPYKEPERR3	9582.62	15179.8	12785.9
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	SLDTTLQFPYKEPERR	SLDTTLQFPYKEPERR	4	SLDTTLQFPYKEPERR4	43382.2	64739.6	54781.6
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	SLDVFNIILVR	SLDVFNIILVR	2	SLDVFNIILVR2	3723.02	2865.54	7329.59
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	SLDWENPTER	SLDWENPTER	2	SLDWENPTER2	4075.21		4083.52
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	SLDWQMDMDLLSK	SLDWQMDMDLLSK	2	SLDWQMDMDLLSK2	52166.2	68637.9	51673.9
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	SLEAASEK	SLEAASEK	1	SLEAASEK1	357983	373614	336421
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	SLEAEALAEDIEK	SLEAEALAEDIEK	2	SLEAEALAEDIEK2	44117.4	37278.5	31508.5
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	SLEAEALAEDIEK	SLEAEALAEDIEK	3	SLEAEALAEDIEK3	6370.59	6761.44	7175.16
Q99P39	Q99P39	NFS1_RAT	Nfs1	Cysteine desulfurase	1	SLEAEGFR	SLEAEGFR	2	SLEAEGFR2	20573	19867.8	21817.8
P04692	P04692	TPM1_RAT	Tpm1	Tropomyosin alpha-1 chain	1	SLEAQAEK	SLEAQAEK	2	SLEAQAEK2	8674.8		
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	SLEAQELAR	SLEAQELAR	2	SLEAQELAR2	36781	16934.8	39386.4
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	SLEAQIIQAR	SLEAQIIQAR	2	SLEAQIIQAR2	72339.1	82160.6	83369.1
Q7TP54	Q7TP54	RIPR2_RAT	Ripor2	Rho family-interacting cell polarization regulator 2	1	SLEATESIK	SLEATESIK	2	SLEATESIK2	9347.61	4557.75	5951.22
B3DMA2	B3DMA2	ACD11_RAT	Acad11	Acyl-CoA dehydrogenase family member 11	1	SLEAYLNQHLPGFGSDHR	SLEAYLNQHLPGFGSDHR	4	SLEAYLNQHLPGFGSDHR4	16018.2	18519.9	16849.2
Q62784	Q62784	INP4A_RAT	Inpp4a	Inositol polyphosphate-4-phosphatase type I A	1	SLECIIQR	SLEC(UniMod:4)IIQR	2	SLEC(UniMod:4)IIQR2	10550.2	11553	18946.4
Q9QUR2	Q9QUR2	DCTN4_RAT	Dctn4	Dynactin subunit 4	1	SLECVSHEVDSHYCPSCLENMPSAEAK	SLEC(UniMod:4)VSHEVDSHYC(UniMod:4)PSC(UniMod:4)LENMPSAEAK	4	SLEC(UniMod:4)VSHEVDSHYC(UniMod:4)PSC(UniMod:4)LENMPSAEAK4	88242.6	83157.1	91998.6
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	SLEDALNQTATVTR	SLEDALNQTATVTR	2	SLEDALNQTATVTR2	136064	109520	103892
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	SLEDALNQTATVTR	SLEDALNQTATVTR	3	SLEDALNQTATVTR3	18759.5	14603.6	17880.5
A0A0G2JWD0	A0A0G2JWD0	A0A0G2JWD0_RAT	Prom1	Prominin 1	1	SLEDFAQSGIDR	SLEDFAQSGIDR	2	SLEDFAQSGIDR2	19036	20295.9	24197.4
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	SLEDLEK	SLEDLEK	2	SLEDLEK2	120390	138505	148649
A0A8I6AL43	A0A8I6AL43	A0A8I6AL43_RAT	Ate1	Arginyl-tRNA--protein transferase 1	1	SLEDLIFESLPEDASHK	SLEDLIFESLPEDASHK	3	SLEDLIFESLPEDASHK3	9650.03	8229.78	9780.57
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	SLEDLNK	SLEDLNK	1	SLEDLNK1	225631	250101	246546
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	SLEDLNK	SLEDLNK	2	SLEDLNK2	123679	111658	115185
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	SLEDLNKQLDQQVEVFRR	SLEDLNKQLDQQVEVFRR	3	SLEDLNKQLDQQVEVFRR3	16280.6	7291.5	13122.6
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	SLEDLNKQLDQQVEVFRR	SLEDLNKQLDQQVEVFRR	4	SLEDLNKQLDQQVEVFRR4	22815.8	27741.8	28500
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	SLEDQVETLR	SLEDQVETLR	2	SLEDQVETLR2	952154	1.0294e+06	990084
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	SLEDVVR	SLEDVVR	2	SLEDVVR2	309313	311327	334103
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	SLEEECESSLCTPALR	SLEEEC(UniMod:4)ESSLC(UniMod:4)TPALR	2	SLEEEC(UniMod:4)ESSLC(UniMod:4)TPALR2	4044.81		2411.25
B2RZC0	B2RZC0	B2RZC0_RAT	Aig1	Aig1 protein	1	SLEEEKEKPK	SLEEEKEKPK	3	SLEEEKEKPK3			62058.1
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	SLEEFNDVYLVTHLMGADLNNIVK	SLEEFNDVYLVTHLMGADLNNIVK	3	SLEEFNDVYLVTHLMGADLNNIVK3	42369.3	47319.1	60766
Q68FS1	Q68FS1	NUBP2_RAT	Nubp2	Cytosolic Fe-S cluster assembly factor NUBP2	1	SLEEGRDFIQEFPK	SLEEGRDFIQEFPK	3	SLEEGRDFIQEFPK3	36970.2	43843.8	45790.6
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	SLEEIIPR	SLEEIIPR	2	SLEEIIPR2	221687	278056	256965
P27952	A0A0G2K8H4;A0A0U1RVI9;D3ZIY7;Q6P9V0;D3ZT78;P27952;A0A8J8XHT4;A0A8I6A7W0;D3ZQW7	RS2_RAT	Rps2	Small ribosomal subunit protein uS5	0	SLEEIYLFSLPIK	SLEEIYLFSLPIK	2	SLEEIYLFSLPIK2	6139.14	6735.07	2340.4
G3V6R4	D3ZWS0;G3V6R4	G3V6R4_RAT	Lrrc1	Leucine rich repeat containing 1	0	SLEELLLDANQLR	SLEELLLDANQLR	2	SLEELLLDANQLR2	16333.5	7896.97	6607.94
G3V6R4	D3ZWS0;G3V6R4	G3V6R4_RAT	Lrrc1	Leucine rich repeat containing 1	0	SLEELLLDANQLR	SLEELLLDANQLR	3	SLEELLLDANQLR3	5047.32	3907.14	3309.73
P0CC10	P0CC10	LRC4B_RAT	Lrrc4b	Leucine-rich repeat-containing protein 4B	1	SLEELNLSHNNLMSLPHDLFTPLHR	SLEELNLSHNNLMSLPHDLFTPLHR	4	SLEELNLSHNNLMSLPHDLFTPLHR4	4292.69		
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	SLEELSK	SLEELSK	2	SLEELSK2	186258	184335	200553
Q562C6	Q562C6	LZTL1_RAT	Lztfl1	Leucine zipper transcription factor-like protein 1	1	SLEENLAAAK	SLEENLAAAK	2	SLEENLAAAK2	10975.1	5810.59	10289.1
A0A8I5Y4X4	A0A8I5Y4X4	A0A8I5Y4X4_RAT	Nub1	Negative regulator of ubiquitin-like proteins 1	1	SLEEQGVTHNVK	SLEEQGVTHNVK	2	SLEEQGVTHNVK2	7519.99	7171.93	5281.55
A0A8I5Y4X4	A0A8I5Y4X4	A0A8I5Y4X4_RAT	Nub1	Negative regulator of ubiquitin-like proteins 1	1	SLEEQGVTHNVK	SLEEQGVTHNVK	3	SLEEQGVTHNVK3	39613.1	46539.3	47715.4
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	SLEETIIQK	SLEETIIQK	2	SLEETIIQK2	31254.6	24482.3	24745.8
P98166	P98166	VLDLR_RAT	Vldlr	Very low-density lipoprotein receptor	1	SLEFLAHPLALTIFEDR	SLEFLAHPLALTIFEDR	3	SLEFLAHPLALTIFEDR3	5374.34	4654.15	8459.06
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	SLEGGGCPVR	SLEGGGC(UniMod:4)PVR	2	SLEGGGC(UniMod:4)PVR2	307496	336139	360570
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	SLEGTEAQVFK	SLEGTEAQVFK	2	SLEGTEAQVFK2	354098	395344	402020
P36876	P56932;P36877;P97888;P36876	2ABA_RAT	Ppp2r2a	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	0	SLEIEEK	SLEIEEK	2	SLEIEEK2	61453.4	60979.3	79348.1
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	SLEIPGSSDPNVIPDGDFSSFVR	SLEIPGSSDPNVIPDGDFSSFVR	3	SLEIPGSSDPNVIPDGDFSSFVR3	56943.9	51789.8	56258.4
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	SLEIPGSSDPNVIPDGDFSSFVR	SLEIPGSSDPNVIPDGDFSSFVR	4	SLEIPGSSDPNVIPDGDFSSFVR4	47698.9	82834.2	56073.6
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	SLEIQKPAVAPR	SLEIQKPAVAPR	3	SLEIQKPAVAPR3	31339.7	35670	41862.5
P01883	P01883	IGHD_RAT		Ig delta chain C region (Fragment)	1	SLEISGCYHLLPESDGPPR	SLEISGC(UniMod:4)YHLLPESDGPPR	3	SLEISGC(UniMod:4)YHLLPESDGPPR3	14153.5	11932	7178.41
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	SLELAIGR	SLELAIGR	2	SLELAIGR2	151174	181408	136809
Q9JHU5	Q9JHU5	ARFP1_RAT	Arfip1	Arfaptin-1	1	SLELHEEFGYNADTQK	SLELHEEFGYNADTQK	3	SLELHEEFGYNADTQK3	8588.64	4419.97	
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	SLELHSLLETSMK	SLELHSLLETSMK	3	SLELHSLLETSMK3	2940.14	3597.1	1710.23
D4A758	D4A758	D4A758_RAT	Lrrc8b	Leucine rich repeat containing 8 VRAC subunit B	1	SLELLSCDLER	SLELLSC(UniMod:4)DLER	2	SLELLSC(UniMod:4)DLER2	9255.04	10848.6	
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	SLELLVGEK	SLELLVGEK	2	SLELLVGEK2	483718	479323	473367
F1M6V8	F1M6V8	F1M6V8_RAT	Strn4	Striatin 4	1	SLELNGAGEPVEGAPR	SLELNGAGEPVEGAPR	2	SLELNGAGEPVEGAPR2	2695.53		3373.55
B0BN85	B0BN85	SGT1_RAT	Sugt1	Protein SGT1 homolog	1	SLELNPNNSTALLR	SLELNPNNSTALLR	2	SLELNPNNSTALLR2	20758.3	33946.5	33392.8
A0A096MJ11	A0A096MJ11	A0A096MJ11_RAT	Gsdmd	Gasdermin D	1	SLEMELR	SLEMELR	2	SLEMELR2	44075	65316.2	47258
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	SLEMTFIPTAEDTGK	SLEMTFIPTAEDTGK	2	SLEMTFIPTAEDTGK2	231742	265582	282335
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	SLEMTFIPTAEDTGK	SLEMTFIPTAEDTGK	3	SLEMTFIPTAEDTGK3	14875.4	19455.7	20297
B2RYK9	B2RYK9	B2RYK9_RAT	Dmkn	Dermokine	1	SLENAGNEIGR	SLENAGNEIGR	2	SLENAGNEIGR2	23853.9	13112.4	22480.9
Q4FZT2	Q4FZT2	PPME1_RAT	Ppme1	Protein phosphatase methylesterase 1	1	SLENAIEWSVK	SLENAIEWSVK	2	SLENAIEWSVK2	5809.03	5280.88	18330.1
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	SLENIYCEPEGQECGPSINPLPKPR	SLENIYC(UniMod:4)EPEGQEC(UniMod:4)GPSINPLPKPR	3	SLENIYC(UniMod:4)EPEGQEC(UniMod:4)GPSINPLPKPR3	25251.9	8818.57	12848.8
A0A8I5ZMX2	A0A8I5ZMX2	A0A8I5ZMX2_RAT	Adamts3	ADAM metallopeptidase with thrombospondin type 1, motif 3	1	SLENVCR	SLENVC(UniMod:4)R	2	SLENVC(UniMod:4)R2	24004.3	14476.8	26580.4
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	SLENYHFVDEHGK	SLENYHFVDEHGK	2	SLENYHFVDEHGK2	4971.14	8229.25	11495.4
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	SLENYHFVDEHGK	SLENYHFVDEHGK	3	SLENYHFVDEHGK3	176700	56262.3	70801.6
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	SLENYHFVDEHGK	SLENYHFVDEHGK	4	SLENYHFVDEHGK4	91384.3	29734.6	48172.6
Q80WD1	Q80WD1	R4RL2_RAT	Rtn4rl2	Reticulon-4 receptor-like 2	1	SLEPDTFQGLER	SLEPDTFQGLER	2	SLEPDTFQGLER2	25218.9	18497.3	14093.5
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	SLEPEPK	SLEPEPK	2	SLEPEPK2	190995	251024	200067
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	SLEPEPKEPVSPR	SLEPEPKEPVSPR	3	SLEPEPKEPVSPR3	35843.9	55721.2	46445.5
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	SLEPGDETPK	SLEPGDETPK	2	SLEPGDETPK2	19989.3	15299	16632
D3ZIK0	D3ZIK0	D3ZIK0_RAT	Glce	heparosan-N-sulfate-glucuronate 5-epimerase	1	SLEPGWYSAMAQGQAISTLVR	SLEPGWYSAMAQGQAISTLVR	3	SLEPGWYSAMAQGQAISTLVR3	2606.27	1618.05	3152.87
B5DF86	B5DF86	B5DF86_RAT	Cog8	Conserved oligomeric Golgi complex subunit 8	1	SLEPIASATLESGSEK	SLEPIASATLESGSEK	2	SLEPIASATLESGSEK2	7419.82	4651.54	11156.8
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	SLEPILQR	SLEPILQR	2	SLEPILQR2	12224.8	16713.9	14819.9
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	SLEPLALGR	SLEPLALGR	2	SLEPLALGR2	32158.1	29671.8	39470
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	SLEPQALLGLQNLYYLHLER	SLEPQALLGLQNLYYLHLER	3	SLEPQALLGLQNLYYLHLER3	850078	1.06076e+06	733938
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	SLEPQALLGLQNLYYLHLER	SLEPQALLGLQNLYYLHLER	4	SLEPQALLGLQNLYYLHLER4	46178.1	56035.2	38588.1
A0A0G2K4E8	A0A0G2K4E8	A0A0G2K4E8_RAT	R3hdm2	R3H domain containing 2	1	SLEPRPWSSTDSDGSVR	SLEPRPWSSTDSDGSVR	3	SLEPRPWSSTDSDGSVR3	10546.6	6959.63	
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	SLEPVAGQLSNSVATK	SLEPVAGQLSNSVATK	2	SLEPVAGQLSNSVATK2	10700.7	10322.4	22413.2
D3ZLC4	D3ZLC4	D3ZLC4_RAT	Slc2a6	Solute carrier family 2 member 6	1	SLEQIEAFFHTR	SLEQIEAFFHTR	3	SLEQIEAFFHTR3		5504.37	2443.79
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	SLERGVEDKDGYR	SLERGVEDKDGYR	4	SLERGVEDKDGYR4		13843	7773.11
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	SLESALK	SLESALK	1	SLESALK1	8117	4274.15	5337.86
P62890	P62890;A0A8I6AMA3;M0RA78	RL30_RAT	Rpl30	Large ribosomal subunit protein eL30	0	SLESINSR	SLESINSR	2	SLESINSR2	42581.7	20421.8	39460.9
D3ZUC2	D3ZUC2	D3ZUC2_RAT	Mov10	RNA helicase	1	SLESNPEQLQAMK	SLESNPEQLQAMK	2	SLESNPEQLQAMK2	2775.01	2798.69	6137.48
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	SLESQSQVADQQEANALR	SLESQSQVADQQEANALR	3	SLESQSQVADQQEANALR3	3691.19	2484.36	6955
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	SLETCMYDHK	SLETC(UniMod:4)MYDHK	2	SLETC(UniMod:4)MYDHK2	21836.9	20638.2	19185.1
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	SLETCMYDHK	SLETC(UniMod:4)MYDHK	3	SLETC(UniMod:4)MYDHK3	76793.4	90589.4	73414.3
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	SLETEHK	SLETEHK	2	SLETEHK2			172716
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	SLETENAGLR	SLETENAGLR	2	SLETENAGLR2	44994.6	49675.6	47488.2
A0A8I6ARU6	A0A8I6ARU6	A0A8I6ARU6_RAT	Galk1	Galactokinase 1	1	SLETSLVPLSDPK	SLETSLVPLSDPK	2	SLETSLVPLSDPK2	14459.6	14607.7	20932.8
Q5HZV9	Q5HZV9	PP1R7_RAT	Ppp1r7	Protein phosphatase 1 regulatory subunit 7	1	SLETVYLER	SLETVYLER	2	SLETVYLER2	267117	303467	281369
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	SLEVIFTPVIEDIEK	SLEVIFTPVIEDIEK	2	SLEVIFTPVIEDIEK2	74891.8	70648.4	84489.5
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	SLEVIFTPVIEDIEK	SLEVIFTPVIEDIEK	3	SLEVIFTPVIEDIEK3	29303.1	24497.4	26629.3
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	SLEVSER	SLEVSER	2	SLEVSER2	1.38823e+06	1.50469e+06	1.43852e+06
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	SLEVVVDLYQK	SLEVVVDLYQK	2	SLEVVVDLYQK2	9061.35	10757	6047.2
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	SLEVYLVR	SLEVYLVR	2	SLEVYLVR2	96748.8	95181.8	80812.4
M0RCL7	M0RCL7	M0RCL7_RAT	ENSRNOG00000069838	Ig-like domain-containing protein	1	SLEWIGEINTDGSK	SLEWIGEINTDGSK	2	SLEWIGEINTDGSK2	214375	180642	192570
D3ZC54	D3ZC54	D3ZC54_RAT	AABR07065823.2	Ig-like domain-containing protein	1	SLEWIGEIYPNSGATNFNEK	SLEWIGEIYPNSGATNFNEK	3	SLEWIGEIYPNSGATNFNEK3	104197	96011.1	117054
A0A8I6AIU4	A0A8I6AIU4	A0A8I6AIU4_RAT	ENSRNOG00000067551	Ig-like domain-containing protein	1	SLEWIGYINPNSGYTNYNEK	SLEWIGYINPNSGYTNYNEK	3	SLEWIGYINPNSGYTNYNEK3	10522.7	10830.3	7085.41
A0A8I6AC42	A0A8I6AC42;D3ZMY4	A0A8I6AC42_RAT	ENSRNOG00000065690	Ig-like domain-containing protein	0	SLEWLAAIDWDGDK	SLEWLAAIDWDGDK	2	SLEWLAAIDWDGDK2	21490.1	23824.4	29472.2
A0A8I6AC42	A0A8I6AC42;D3ZMY4	A0A8I6AC42_RAT	ENSRNOG00000065690	Ig-like domain-containing protein	0	SLEWLAAIDWDGDKYYNPSLK	SLEWLAAIDWDGDKYYNPSLK	3	SLEWLAAIDWDGDKYYNPSLK3	4313.42		
P51886	P51886	LUM_RAT	Lum	Lumican	1	SLEYLDLSFNQMSK	SLEYLDLSFNQMSK	2	SLEYLDLSFNQMSK2	5.74845e+06	309147	252604
P51886	P51886	LUM_RAT	Lum	Lumican	1	SLEYLDLSFNQMSK	SLEYLDLSFNQMSK	3	SLEYLDLSFNQMSK3	527634	597323	563597
Q63691	Q63691	CD14_RAT	Cd14	Monocyte differentiation antigen CD14	1	SLEYLLK	SLEYLLK	2	SLEYLLK2	45233.3	49882.7	33323
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	SLFAEFAVQAEK	SLFAEFAVQAEK	2	SLFAEFAVQAEK2	7953.2	10377.3	7198.8
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	SLFAMPETGIGLFPDVGGGYFLPR	SLFAMPETGIGLFPDVGGGYFLPR	3	SLFAMPETGIGLFPDVGGGYFLPR3	8179.63		
Q6AXN3	Q6AXN3	TMED5_RAT	Tmed5	Transmembrane emp24 domain-containing protein 5	1	SLFEDKR	SLFEDKR	2	SLFEDKR2	552455	558259	561609
Q6AXY8	Q6AXY8	Q6AXY8_RAT	Dhrs1	Dehydrogenase/reductase 1	1	SLFEQVDREQQGR	SLFEQVDREQQGR	3	SLFEQVDREQQGR3	21640.5	16163.5	21467.3
P0C1S9	P0C1S9	DGLB_RAT	Daglb	Diacylglycerol lipase-beta	1	SLFEYSK	SLFEYSK	2	SLFEYSK2	120660	123020	114959
Q66H85	Q66H85	ANKZ1_RAT	Ankzf1	tRNA endonuclease ANKZF1	1	SLFFGGQGAPLQR	SLFFGGQGAPLQR	2	SLFFGGQGAPLQR2	3735.54	4428.27	4559.11
P19468	P19468	GSH1_RAT	Gclc	Glutamate--cysteine ligase catalytic subunit	1	SLFFPDEAINK	SLFFPDEAINK	2	SLFFPDEAINK2	7748.1	3379.75	7183.37
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	SLFGGTSGLSSLK	SLFGGTSGLSSLK	2	SLFGGTSGLSSLK2	5588.76	23581.8	19103.5
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	SLFGHTVGGAAGVVSR	SLFGHTVGGAAGVVSR	3	SLFGHTVGGAAGVVSR3	21153.5	20153.4	26016.9
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	SLFIDTVASDAK	SLFIDTVASDAK	2	SLFIDTVASDAK2	89799.6	122842	93233.5
A0A8I5ZU57	A0A8I5ZU57	A0A8I5ZU57_RAT	Ccny	Cyclin Y	1	SLFINHHPPGQTSR	SLFINHHPPGQTSR	3	SLFINHHPPGQTSR3	19804.7	11593.4	9655.86
P47816	P47816	PDCD2_RAT	Pdcd2	Programmed cell death protein 2	1	SLFLFCCR	SLFLFC(UniMod:4)C(UniMod:4)R	2	SLFLFC(UniMod:4)C(UniMod:4)R2	12968.3	11668.1	20175.6
B3GNI6	B3GNI6	SEP11_RAT	Septin11	Septin-11	1	SLFNYHDTR	SLFNYHDTR	2	SLFNYHDTR2	9150.8	11488.3	
B3GNI6	B3GNI6	SEP11_RAT	Septin11	Septin-11	1	SLFNYHDTR	SLFNYHDTR	3	SLFNYHDTR3	46330.9	59642.9	40166
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	SLFPENLQADK	SLFPENLQADK	2	SLFPENLQADK2	95977.1	115019	86065.4
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	SLFPENLQADKK	SLFPENLQADKK	2	SLFPENLQADKK2	3141.42	4351.45	1806.86
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	SLFPENLQADKK	SLFPENLQADKK	3	SLFPENLQADKK3	24743.7	16674.6	28442.2
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	SLFPGHPHSAYEQAFQGDESVR	SLFPGHPHSAYEQAFQGDESVR	3	SLFPGHPHSAYEQAFQGDESVR3	13553.8	26130.8	8656.17
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	SLFPGHPHSAYEQAFQGDESVR	SLFPGHPHSAYEQAFQGDESVR	4	SLFPGHPHSAYEQAFQGDESVR4	141424	196516	176138
A0A8I6ASK6	A0A8I6ASK6	A0A8I6ASK6_RAT	Fcrl1	Fc receptor-like 1	1	SLFPSPK	SLFPSPK	1	SLFPSPK1	11173.2	23914.2	23913.1
A0A8I6ASK6	A0A8I6ASK6	A0A8I6ASK6_RAT	Fcrl1	Fc receptor-like 1	1	SLFPSPK	SLFPSPK	2	SLFPSPK2	1.36669e+06	1.22107e+06	1.28032e+06
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	SLFSATPLTTDDGVLLR	SLFSATPLTTDDGVLLR	2	SLFSATPLTTDDGVLLR2	17948.6	11900.3	
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	SLFSATPLTTDDGVLLRR	SLFSATPLTTDDGVLLRR	3	SLFSATPLTTDDGVLLRR3	8793.5	10310.8	
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	SLFSNIVTK	SLFSNIVTK	2	SLFSNIVTK2	68471.5	65926.4	75208.5
B5DF91	B5DF91	ELAV1_RAT	Elavl1	ELAV-like protein 1	1	SLFSSIGEVESAK	SLFSSIGEVESAK	2	SLFSSIGEVESAK2	13510	12214.5	8372.17
Q00438	Q00438	PTBP1_RAT	Ptbp1	Polypyrimidine tract-binding protein 1	1	SLFSSNGGVVK	SLFSSNGGVVK	2	SLFSSNGGVVK2	23222.4	21557.5	25230.2
F7FI79	F7FI79	F7FI79_RAT	Fhip2b	FHF complex subunit HOOK interacting protein 2B	1	SLFSVLVR	SLFSVLVR	2	SLFSVLVR2	26701.5	23304.2	15555.1
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	SLFTSQSSGEGEAHQTTESPTTK	SLFTSQSSGEGEAHQTTESPTTK	3	SLFTSQSSGEGEAHQTTESPTTK3	4276.97		
D4ADT7	D4ADT7	D4ADT7_RAT	Nod1	Nucleotide-binding oligomerization domain containing 1	1	SLFVFGQEEVQASK	SLFVFGQEEVQASK	2	SLFVFGQEEVQASK2		11259.4	10697.5
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	SLFVLPHTDHLVGYIIR	SLFVLPHTDHLVGYIIR	3	SLFVLPHTDHLVGYIIR3	42159.5	108813	93307.2
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	SLFVLPHTDHLVGYIIR	SLFVLPHTDHLVGYIIR	4	SLFVLPHTDHLVGYIIR4	18379.7	16952.5	19304.8
D3ZE20	D3ZE20	D3ZE20_RAT	Nfatc1	Nuclear factor of activated T-cells 1	1	SLGACHLLGSPR	SLGAC(UniMod:4)HLLGSPR	3	SLGAC(UniMod:4)HLLGSPR3	31969.2	26867.6	23494
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	SLGAEPLEVDLK	SLGAEPLEVDLK	2	SLGAEPLEVDLK2	166723	140759	137876
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	SLGAEPLEVDLKESGEGQGGYAK	SLGAEPLEVDLKESGEGQGGYAK	3	SLGAEPLEVDLKESGEGQGGYAK3	9847.79	21490.6	19490.1
Q7TPA5	Q7TPA5	SPA11_RAT	Serpina11	Serpin A11	1	SLGAPQPASHQSLEPAPAYHK	SLGAPQPASHQSLEPAPAYHK	4	SLGAPQPASHQSLEPAPAYHK4	14157.6	19296	16849.1
Q3B7T9	Q3B7T9	RFIP1_RAT	Rab11fip1	Rab11 family-interacting protein 1	1	SLGAPVWR	SLGAPVWR	2	SLGAPVWR2	39431.9	27417.2	34230.6
A0A8I6A282	A0A8I6A282	A0A8I6A282_RAT	Antxr2	Anthrax toxin receptor	1	SLGASVYCVGVLDFEQAQLER	SLGASVYC(UniMod:4)VGVLDFEQAQLER	3	SLGASVYC(UniMod:4)VGVLDFEQAQLER3	11672	8630.65	10515.5
A0A8I5ZU99	A0A8I5ZU99	A0A8I5ZU99_RAT	Ppm1l	Protein phosphatase, Mg2+/Mn2+ dependent, 1L	1	SLGDYPLK	SLGDYPLK	2	SLGDYPLK2	21522.4	24345.3	16724.5
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	SLGEEAWHSK	SLGEEAWHSK	2	SLGEEAWHSK2	91461.7	99137.7	86615.3
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	SLGEEAWHSK	SLGEEAWHSK	3	SLGEEAWHSK3	1.78501e+06	1.96098e+06	2.11941e+06
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	SLGEEGLNR	SLGEEGLNR	2	SLGEEGLNR2	137335	135633	108839
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	SLGEIAALTSK	SLGEIAALTSK	2	SLGEIAALTSK2	1.80566e+06	1.81027e+06	1.81733e+06
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	SLGEIPIVESEIK	SLGEIPIVESEIK	2	SLGEIPIVESEIK2	563354	676915	652000
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	SLGEIPIVESEIK	SLGEIPIVESEIK	3	SLGEIPIVESEIK3	2415.17	5866.45	7412.04
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	SLGEIPIVESEIKK	SLGEIPIVESEIKK	2	SLGEIPIVESEIKK2	9862.74		
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	SLGEIPIVESEIKK	SLGEIPIVESEIKK	3	SLGEIPIVESEIKK3	69677	64661.8	77505.5
A0A8I6AVZ7	A0A8I6AVZ7	A0A8I6AVZ7_RAT	Mtcl1	Microtubule crosslinking factor 1	1	SLGELDSSAEGK	SLGELDSSAEGK	2	SLGELDSSAEGK2	4014.95	3861.8	2943.8
Q9QXY4	Q9QXY4	OGFR_RAT	Ogfr	Opioid growth factor receptor	1	SLGELGLEHYQAPLVR	SLGELGLEHYQAPLVR	2	SLGELGLEHYQAPLVR2	1211.94	3453.35	527.395
Q9QXY4	Q9QXY4	OGFR_RAT	Ogfr	Opioid growth factor receptor	1	SLGELGLEHYQAPLVR	SLGELGLEHYQAPLVR	3	SLGELGLEHYQAPLVR3	80302.3	94360.8	83302.8
Q4KLH3	Q4KLH3	OGRL1_RAT	Ogfrl1	Opioid growth factor receptor-like protein 1	1	SLGELGYESFK	SLGELGYESFK	2	SLGELGYESFK2	22889.9	38840.1	36027.3
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	SLGEVNFTATAEALQSPELCGNK	SLGEVNFTATAEALQSPELC(UniMod:4)GNK	3	SLGEVNFTATAEALQSPELC(UniMod:4)GNK3	56498.8	28865.2	50598.7
E9PU64	E9PU64	E9PU64_RAT	Scin	Scinderin	1	SLGGQAVQVR	SLGGQAVQVR	2	SLGGQAVQVR2	911.954		2433.65
D4A6U4	D4A6U4	D4A6U4_RAT	Tecpr2	Tectonin beta-propeller repeat containing 2	1	SLGGTVCEAR	SLGGTVC(UniMod:4)EAR	2	SLGGTVC(UniMod:4)EAR2	13015.2	8210.95	6735.53
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	SLGISIVGGR	SLGISIVGGR	2	SLGISIVGGR2	8669.66	10099.2	5674.79
P0C5W1	P0C5W1	MAP1S_RAT	Map1s	Microtubule-associated protein 1S	1	SLGIVPLPLQR	SLGIVPLPLQR	2	SLGIVPLPLQR2	89671.5	97442.9	98525.2
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	SLGLFGIQVPEEYGGLGLSNTMYAR	SLGLFGIQVPEEYGGLGLSNTMYAR	3	SLGLFGIQVPEEYGGLGLSNTMYAR3	5760.35		6017.11
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	SLGLICDECPVGYTGPR	SLGLIC(UniMod:4)DEC(UniMod:4)PVGYTGPR	2	SLGLIC(UniMod:4)DEC(UniMod:4)PVGYTGPR2	35093.6	32223.6	32276.2
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	SLGLICDECPVGYTGPR	SLGLIC(UniMod:4)DEC(UniMod:4)PVGYTGPR	3	SLGLIC(UniMod:4)DEC(UniMod:4)PVGYTGPR3	9477.65	9789.89	5632.14
B2RYN3	B2RYN3	B2RYN3_RAT	Eef1e1	Eukaryotic translation elongation factor 1 epsilon 1	1	SLGLKPGNK	SLGLKPGNK	2	SLGLKPGNK2	15064	16687.1	17956.5
P23377	P23377	FURIN_RAT	Furin	Furin	1	SLGLNPNHIHIYSASWGPEDDGK	SLGLNPNHIHIYSASWGPEDDGK	4	SLGLNPNHIHIYSASWGPEDDGK4	11462.3	10870.2	10139
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	SLGLSDEDIAK	SLGLSDEDIAK	2	SLGLSDEDIAK2	39242.6	29616	57352.3
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	SLGLTPVDR	SLGLTPVDR	2	SLGLTPVDR2	28343.5	16233.8	23493.6
P04906	P04906	GSTP1_RAT	Gstp1	Glutathione S-transferase P	1	SLGLYGK	SLGLYGK	1	SLGLYGK1	6847.93	6620.07	4993.25
P86182	P86182	CCD22_RAT	Ccdc22	Coiled-coil domain-containing protein 22	1	SLGMNLVQVETECR	SLGMNLVQVETEC(UniMod:4)R	2	SLGMNLVQVETEC(UniMod:4)R2	5372.43	11147.1	9500.04
D3ZJI7	D3ZJI7	D3ZJI7_RAT	Serpinb11	Serpin family B member 11	1	SLGMSDIFNVAK	SLGMSDIFNVAK	2	SLGMSDIFNVAK2	8588.72	6461.9	17939.1
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	SLGNVIDPDTIISGGK	SLGNVIDPDTIISGGK	2	SLGNVIDPDTIISGGK2	44943	46629.6	38738.8
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	SLGNVNFSVSAEAR	SLGNVNFSVSAEAR	2	SLGNVNFSVSAEAR2	135312	104333	119543
Q8CHI9	Q8CHI9	CHSTF_RAT	Chst15	Carbohydrate sulfotransferase 15	1	SLGPMWPITQK	SLGPMWPITQK	2	SLGPMWPITQK2	54427.4	51595	44972.6
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	SLGPYSCSSNGPNLFFIHGPNLYCYSSIDK	SLGPYSC(UniMod:4)SSNGPNLFFIHGPNLYC(UniMod:4)YSSIDK	4	SLGPYSC(UniMod:4)SSNGPNLFFIHGPNLYC(UniMod:4)YSSIDK4	27373	24709.6	10627.8
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	SLGSADELFK	SLGSADELFK	2	SLGSADELFK2	51575.7	42862.3	53310.2
O08773	O08773	RGS14_RAT	Rgs14	Regulator of G-protein signaling 14	1	SLGSGEGESESRPGK	SLGSGEGESESRPGK	2	SLGSGEGESESRPGK2	4177.33		
O08773	O08773	RGS14_RAT	Rgs14	Regulator of G-protein signaling 14	1	SLGSGEGESESRPGK	SLGSGEGESESRPGK	3	SLGSGEGESESRPGK3	5874.4		8286.37
Q05028	Q05028	PDGFB_RAT	Pdgfb	Platelet-derived growth factor subunit B (Fragment)	1	SLGSLAAAEPAVIAECK	SLGSLAAAEPAVIAEC(UniMod:4)K	2	SLGSLAAAEPAVIAEC(UniMod:4)K2	35779.1	28335.9	29876.9
Q5XIN7	Q5XIN7	PMGT1_RAT	Pomgnt1	Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1	1	SLGSQAGPALGWR	SLGSQAGPALGWR	2	SLGSQAGPALGWR2	6385.59	7113.21	7101.03
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	SLGTDLMNEMR	SLGTDLMNEMR	2	SLGTDLMNEMR2	1.14029e+06	1.21191e+06	1.26436e+06
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	SLGTDLMNEMR	SLGTDLMNEMR	3	SLGTDLMNEMR3	4813.42		5896.71
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	SLGTDLMNEMRR	SLGTDLMNEMRR	3	SLGTDLMNEMRR3	14593.2	23863	23567.2
P63144	P63144	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	1	SLGTFTPQHHISLK	SLGTFTPQHHISLK	3	SLGTFTPQHHISLK3		25416.8	22916.7
P63144	P63144	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	1	SLGTFTPQHHISLK	SLGTFTPQHHISLK	4	SLGTFTPQHHISLK4	30329.3	22887.2	40407.3
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	SLGTMPPHVFAIADK	SLGTMPPHVFAIADK	3	SLGTMPPHVFAIADK3	18166.7	13692.7	
P49445	P49445	PTN7_RAT	Ptpn7	Tyrosine-protein phosphatase non-receptor type 7	1	SLGTVEPICSVNTPR	SLGTVEPIC(UniMod:4)SVNTPR	2	SLGTVEPIC(UniMod:4)SVNTPR2	5657.59	7003.44	1411.72
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	SLGVGDPK	SLGVGDPK	2	SLGVGDPK2	34656.2	30202	26958.7
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	SLGVGYAAVDNPIFYKPNTAMLLGDAK	SLGVGYAAVDNPIFYKPNTAMLLGDAK	3	SLGVGYAAVDNPIFYKPNTAMLLGDAK3	15069.1	18317.6	17716.6
D4A4P4	D4A4P4	D4A4P4_RAT	Flad1	FAD synthase	1	SLGVQVCR	SLGVQVC(UniMod:4)R	2	SLGVQVC(UniMod:4)R2	29457.7	25671.3	19139.4
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	SLGVTQLAVAVNK	SLGVTQLAVAVNK	2	SLGVTQLAVAVNK2	13888.2	23453.6	19101.2
Q9EPH8	D3ZSR2;Q9EPH8;G3V9N0	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	0	SLGYAYVNFQQPADAER	SLGYAYVNFQQPADAER	2	SLGYAYVNFQQPADAER2	39426.6	39816.2	38071
Q9EPH8	D3ZSR2;Q9EPH8;G3V9N0	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	0	SLGYAYVNFQQPADAER	SLGYAYVNFQQPADAER	3	SLGYAYVNFQQPADAER3	12326.8	14599.7	17927.8
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	SLGYLCGLVSEK	SLGYLC(UniMod:4)GLVSEK	2	SLGYLC(UniMod:4)GLVSEK2		5317.65	4631.09
E9PU37	E9PU37	E9PU37_RAT	Zdhhc13	Palmitoyltransferase	1	SLHCHVCNSCVAR	SLHC(UniMod:4)HVC(UniMod:4)NSC(UniMod:4)VAR	3	SLHC(UniMod:4)HVC(UniMod:4)NSC(UniMod:4)VAR3	3444.95	8871.92	4985.9
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	SLHDAIMIVR	SLHDAIMIVR	2	SLHDAIMIVR2	132137	138765	118495
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	SLHDAIMIVR	SLHDAIMIVR	3	SLHDAIMIVR3	617643	653105	632629
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	SLHDALCVIR	SLHDALC(UniMod:4)VIR	2	SLHDALC(UniMod:4)VIR2	109306	91757.6	82940.4
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	SLHDALCVIR	SLHDALC(UniMod:4)VIR	3	SLHDALC(UniMod:4)VIR3	476611	545835	467975
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	SLHDALCVLAQTVK	SLHDALC(UniMod:4)VLAQTVK	2	SLHDALC(UniMod:4)VLAQTVK2	16080.2	16458.2	14913.5
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	SLHDALCVLAQTVK	SLHDALC(UniMod:4)VLAQTVK	3	SLHDALC(UniMod:4)VLAQTVK3	89483.4	68311.1	80377.2
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	SLHDALCVLAQTVKDPR	SLHDALC(UniMod:4)VLAQTVKDPR	3	SLHDALC(UniMod:4)VLAQTVKDPR3	9409.03	6806.09	5804.3
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	SLHDALCVLAQTVKDPR	SLHDALC(UniMod:4)VLAQTVKDPR	4	SLHDALC(UniMod:4)VLAQTVKDPR4	29751.6	34637.8	32588.1
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	SLHDALCVVK	SLHDALC(UniMod:4)VVK	2	SLHDALC(UniMod:4)VVK2	134232	130806	93938.2
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	SLHDALCVVK	SLHDALC(UniMod:4)VVK	3	SLHDALC(UniMod:4)VVK3	438120	374950	435757
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	SLHDFALQTLMQIGPR	SLHDFALQTLMQIGPR	2	SLHDFALQTLMQIGPR2	4501.43	11416.3	7312.95
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	SLHDFALQTLMQIGPR	SLHDFALQTLMQIGPR	3	SLHDFALQTLMQIGPR3	35561	40617.7	26895.2
Q7TP48	Q7TP48	APMAP_RAT	Apmap	Adipocyte plasma membrane-associated protein	1	SLHDPDGQVVTYVSEAHEHDGYLYLGSFR	SLHDPDGQVVTYVSEAHEHDGYLYLGSFR	4	SLHDPDGQVVTYVSEAHEHDGYLYLGSFR4	11463.9	15971.2	5713.55
Q5HZE4	Q5HZE4	MTNA_RAT	Mri1	Methylthioribose-1-phosphate isomerase	1	SLHEMGR	SLHEMGR	2	SLHEMGR2		15680	9363.42
Q5HZE4	Q5HZE4	MTNA_RAT	Mri1	Methylthioribose-1-phosphate isomerase	1	SLHEMGRLEHTFCTETR	SLHEMGRLEHTFC(UniMod:4)TETR	3	SLHEMGRLEHTFC(UniMod:4)TETR3		3986.91	
A0A8I6AFT7	A0A8I6AFT7	A0A8I6AFT7_RAT	Nadk	NAD(+) kinase	1	SLHGPCPVTTFGPK	SLHGPC(UniMod:4)PVTTFGPK	3	SLHGPC(UniMod:4)PVTTFGPK3	14844.7	8350.77	5593.06
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SLHLDNFSNQIGK	SLHLDNFSNQIGK	2	SLHLDNFSNQIGK2	1.82076e+06	2.05012e+06	1.91181e+06
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SLHLDNFSNQIGK	SLHLDNFSNQIGK	3	SLHLDNFSNQIGK3	46694.3	54723.2	53341.2
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	SLHLELEAVNGK	SLHLELEAVNGK	3	SLHLELEAVNGK3	4438.74	7454.24	5251.24
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	SLHLLTENK	SLHLLTENK	2	SLHLLTENK2	13632.2	10740.2	23369.6
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	SLHLVIQNDQGHTSVLHSYPESVGR	SLHLVIQNDQGHTSVLHSYPESVGR	3	SLHLVIQNDQGHTSVLHSYPESVGR3	2565.87		
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	SLHLVIQNDQGHTSVLHSYPESVGR	SLHLVIQNDQGHTSVLHSYPESVGR	4	SLHLVIQNDQGHTSVLHSYPESVGR4	8954.85	6812.59	
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	SLHLVSSHSR	SLHLVSSHSR	2	SLHLVSSHSR2	11062.7	9816.27	4139.98
D3Z921	D3Z921	D3Z921_RAT	Tal1	TAL bHLH transcription factor 1, erythroid differentiation factor	1	SLHPALLPAADGAGPR	SLHPALLPAADGAGPR	3	SLHPALLPAADGAGPR3	13730.6		14137.2
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	SLHPWYNITPTSSPK	SLHPWYNITPTSSPK	2	SLHPWYNITPTSSPK2	5931.41	7238.28	
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	SLHPWYNITPTSSPK	SLHPWYNITPTSSPK	3	SLHPWYNITPTSSPK3	67849.9	73241.2	55668.3
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	SLHQDPVVR	SLHQDPVVR	2	SLHQDPVVR2	17576	26411.5	11379.6
Q4G017	Q4G017	NISCH_RAT	Nisch	Nischarin	1	SLHQVEMSHCDAK	SLHQVEMSHC(UniMod:4)DAK	4	SLHQVEMSHC(UniMod:4)DAK4	4275.1	1080.51	4186.15
B4F766	B4F766	DYM_RAT	Dym	Dymeclin	1	SLHQYAAQR	SLHQYAAQR	2	SLHQYAAQR2	3602.38	4316.85	6671.19
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	SLHRPFDDR	SLHRPFDDR	3	SLHRPFDDR3	150876	156292	173066
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	SLHRPFDDREAQELGSPEDR	SLHRPFDDREAQELGSPEDR	3	SLHRPFDDREAQELGSPEDR3	8137.62	4591.32	11308.1
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	SLHRPFDDREAQELGSPEDR	SLHRPFDDREAQELGSPEDR	4	SLHRPFDDREAQELGSPEDR4	177578	235064	175285
Q66HG9	Q66HG9	MAVS_RAT	Mavs	Mitochondrial antiviral-signaling protein	1	SLHSGPELSK	SLHSGPELSK	2	SLHSGPELSK2	68043.1	52987.2	63303.1
P23965	P23965	ECI1_RAT	Eci1	Enoyl-CoA delta isomerase 1, mitochondrial	1	SLHVYLEK	SLHVYLEK	2	SLHVYLEK2	32666	21129.4	53395.9
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	SLIEEGGDWDR	SLIEEGGDWDR	2	SLIEEGGDWDR2	40465.4	34171.2	24432.7
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	SLIEEGGDWDRR	SLIEEGGDWDRR	2	SLIEEGGDWDRR2	2661.44	5209.06	3299.01
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	SLIEEGGDWDRR	SLIEEGGDWDRR	3	SLIEEGGDWDRR3	164183	243673	205699
P05369	P05369	FPPS_RAT	Fdps	Farnesyl pyrophosphate synthase	1	SLIEQCSAPLPPSIFLELANK	SLIEQC(UniMod:4)SAPLPPSIFLELANK	3	SLIEQC(UniMod:4)SAPLPPSIFLELANK3	15553.8	12947.5	9133.07
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	SLIGPDQK	SLIGPDQK	2	SLIGPDQK2	103396	73719.2	89094.8
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	SLIHGNVCAK	SLIHGNVC(UniMod:4)AK	2	SLIHGNVC(UniMod:4)AK2	14731.6	8946.36	14473.1
A0A0G2K1P3	Q1M168;A0A0G2K1P3	A0A0G2K1P3_RAT	Bnip2	BCL2 interacting protein 2	0	SLIIVHPSWFIR	SLIIVHPSWFIR	2	SLIIVHPSWFIR2	10184.7	4615.19	6389.58
A0A0G2K1P3	Q1M168;A0A0G2K1P3	A0A0G2K1P3_RAT	Bnip2	BCL2 interacting protein 2	0	SLIIVHPSWFIR	SLIIVHPSWFIR	3	SLIIVHPSWFIR3	73858.7	83796.1	72467.1
P50609	P50609	FMOD_RAT	Fmod	Fibromodulin	1	SLILLDLSYNHLR	SLILLDLSYNHLR	2	SLILLDLSYNHLR2	10670.8	7197	14203.8
P50609	P50609	FMOD_RAT	Fmod	Fibromodulin	1	SLILLDLSYNHLR	SLILLDLSYNHLR	3	SLILLDLSYNHLR3	41013.2	37950.2	28254.9
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	SLIMEENK	SLIMEENK	2	SLIMEENK2	16810.1	6599.39	12287.6
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	SLIMEENKEEMER	SLIMEENKEEMER	2	SLIMEENKEEMER2	3018.43	3777.89	
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	SLIMEENKEEMER	SLIMEENKEEMER	3	SLIMEENKEEMER3	27390.4	34010.1	39645.5
D3ZEF9	D3ZEF9	D3ZEF9_RAT	B3gnt2	Hexosyltransferase	1	SLIPHFAR	SLIPHFAR	2	SLIPHFAR2	23439.2	18624.6	24833.1
Q9WVB1	A0A0G2JT78;Q9WVB1	RAB6A_RAT	Rab6a	Ras-related protein Rab-6A	0	SLIPSYIR	SLIPSYIR	2	SLIPSYIR2	1.49318e+06	1.42265e+06	1.57612e+06
Q9JHW1	Q9JHW1	CBPD_RAT	Cpd	Carboxypeptidase D	1	SLIQFMK	SLIQFMK	2	SLIQFMK2	8889.81		7053.57
Q9JHB5	Q9JHB5	TSNAX_RAT	Tsnax	Translin-associated protein X	1	SLISMEEINR	SLISMEEINR	2	SLISMEEINR2	15783.9	13372.5	10805.6
D3ZWG9	D3ZWG9	D3ZWG9_RAT	Ptar1	Protein prenyltransferase alpha subunit repeat containing 1	1	SLISQTTTDNAVPQHNSLK	SLISQTTTDNAVPQHNSLK	3	SLISQTTTDNAVPQHNSLK3	7373.19	4566.15	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	SLISWNYLR	SLISWNYLR	2	SLISWNYLR2	16434.1	17241.5	23439.7
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	SLITFVNK	SLITFVNK	1	SLITFVNK1	8081.93	3545.63	7176.23
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	SLITFVNK	SLITFVNK	2	SLITFVNK2	1.23279e+06	1.17424e+06	1.24584e+06
A0A8I5Y6H9	A0A8I5Y6H9	A0A8I5Y6H9_RAT	Tln2	Talin 2	1	SLITSIR	SLITSIR	2	SLITSIR2		55518.7	57028.7
O55012	O55012	PICAL_RAT	Picalm	Phosphatidylinositol-binding clathrin assembly protein	1	SLITTHHLMVYGNER	SLITTHHLMVYGNER	3	SLITTHHLMVYGNER3	6289.99	4194.09	2579.27
O55012	O55012	PICAL_RAT	Picalm	Phosphatidylinositol-binding clathrin assembly protein	1	SLITTHHLMVYGNER	SLITTHHLMVYGNER	4	SLITTHHLMVYGNER4	43997.5	40690.4	40332.5
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	SLIVAGLGDGSIR	SLIVAGLGDGSIR	2	SLIVAGLGDGSIR2	22983.2	12593.5	24713.3
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	SLIWTLLK	SLIWTLLK	2	SLIWTLLK2	29937	36625.6	38597
Q5FVR0	Q5FVR0	TIMD2_RAT	Timd2	T-cell immunoglobulin and mucin domain-containing protein 2	1	SLIWTNGYK	SLIWTNGYK	2	SLIWTNGYK2	248524	241719	284589
Q64232	Q64232	TECR_RAT	Tecr	Very-long-chain enoyl-CoA reductase	1	SLKDEDVLQK	SLKDEDVLQK	2	SLKDEDVLQK2	8703.67	9786.2	4990.85
Q64232	Q64232	TECR_RAT	Tecr	Very-long-chain enoyl-CoA reductase	1	SLKDEDVLQK	SLKDEDVLQK	3	SLKDEDVLQK3	36389.5	30906.8	31875.3
Q06647	Q06647	ATPO_RAT	Atp5po	ATP synthase subunit O, mitochondrial	1	SLKDITTK	SLKDITTK	2	SLKDITTK2	12660.4	22511	22042.9
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	SLKEMEESIR	SLKEMEESIR	2	SLKEMEESIR2	2236.78	7113.76	19832.2
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	SLKEMEESIR	SLKEMEESIR	3	SLKEMEESIR3	29065.1	89543.6	60059.5
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	SLKPAPHLFAQLSK	SLKPAPHLFAQLSK	3	SLKPAPHLFAQLSK3	4465.63	4224.67	
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	SLKPDFEGEDLENPK	SLKPDFEGEDLENPK	2	SLKPDFEGEDLENPK2	7187.99	3765.43	9458.31
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	SLKPDFEGEDLENPK	SLKPDFEGEDLENPK	3	SLKPDFEGEDLENPK3	40998.7	94499.5	66169.4
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	SLLAAQQTFVDR	SLLAAQQTFVDR	2	SLLAAQQTFVDR2	17414.7	12165.7	22025.5
P47197	P47197	AKT2_RAT	Akt2	RAC-beta serine/threonine-protein kinase	1	SLLAGLLK	SLLAGLLK	2	SLLAGLLK2	12482.8	10830.1	19180.7
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	SLLALEK	SLLALEK	2	SLLALEK2	250014	239626	242462
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	SLLALEKEEEEER	SLLALEKEEEEER	2	SLLALEKEEEEER2	2367.47	3693.56	3448.36
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	SLLALEKEEEEER	SLLALEKEEEEER	3	SLLALEKEEEEER3	117006	102089	118658
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	SLLAMQEDR	SLLAMQEDR	2	SLLAMQEDR2	227187	243347	261887
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	SLLASLHSSR	SLLASLHSSR	2	SLLASLHSSR2	15507.7	11698.5	7034.83
Q6AYG5	Q6AYG5	ECHD1_RAT	Echdc1	Ethylmalonyl-CoA decarboxylase	1	SLLASSLSVR	SLLASSLSVR	2	SLLASSLSVR2	29473.8	25093.2	25445.5
Q63615	Q63615	VP33A_RAT	Vps33a	Vacuolar protein sorting-associated protein 33A	1	SLLCEQR	SLLC(UniMod:4)EQR	2	SLLC(UniMod:4)EQR2	32645.2	24166.7	23780.8
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	SLLDACEGR	SLLDAC(UniMod:4)EGR	2	SLLDAC(UniMod:4)EGR2	421426	477180	476189
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	SLLDACEGRR	SLLDAC(UniMod:4)EGRR	2	SLLDAC(UniMod:4)EGRR2	3472.51	2012.92	
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	SLLDACEGRR	SLLDAC(UniMod:4)EGRR	3	SLLDAC(UniMod:4)EGRR3	681137	691772	691212
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	SLLDANFEPGK	SLLDANFEPGK	2	SLLDANFEPGK2	6374.78	5758.98	11407.9
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	SLLDANFEPGKK	SLLDANFEPGKK	2	SLLDANFEPGKK2	4646.41	5095.71	10936.2
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	SLLDANFEPGKK	SLLDANFEPGKK	3	SLLDANFEPGKK3	40042	54493.5	38712.8
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	SLLDASEEAIK	SLLDASEEAIK	2	SLLDASEEAIK2	705538	615322	676018
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	SLLDASEEAIKK	SLLDASEEAIKK	2	SLLDASEEAIKK2	36188.1	28579.8	27070
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	SLLDASEEAIKK	SLLDASEEAIKK	3	SLLDASEEAIKK3	319793	287487	303235
Q6Y1S1	Q6Y1S1	MYD88_RAT	Myd88	Myeloid differentiation primary response protein MyD88	1	SLLDAWQGR	SLLDAWQGR	2	SLLDAWQGR2	13468	14352.3	11271.8
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	SLLDICK	SLLDIC(UniMod:4)K	2	SLLDIC(UniMod:4)K2	39333.1	37255.3	23908.2
O35346	O35346	FAK1_RAT	Ptk2	Focal adhesion kinase 1	1	SLLDSVK	SLLDSVK	2	SLLDSVK2	23218.7	22484.9	
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	SLLDTLR	SLLDTLR	2	SLLDTLR2	86320.6	96930.8	90374.1
Q62991	Q62991	SCFD1_RAT	Scfd1	Sec1 family domain-containing protein 1	1	SLLDVISDPDAGTPEDK	SLLDVISDPDAGTPEDK	2	SLLDVISDPDAGTPEDK2	15670.9	12228	11240
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	SLLEAQR	SLLEAQR	2	SLLEAQR2	144273	176139	139511
P31325	P31325	PHKG2_RAT	Phkg2	Phosphorylase b kinase gamma catalytic chain, liver/testis isoform	1	SLLEAVNFLHVNNIVHR	SLLEAVNFLHVNNIVHR	3	SLLEAVNFLHVNNIVHR3	14771.8		12223.4
P31325	P31325	PHKG2_RAT	Phkg2	Phosphorylase b kinase gamma catalytic chain, liver/testis isoform	1	SLLEAVNFLHVNNIVHR	SLLEAVNFLHVNNIVHR	4	SLLEAVNFLHVNNIVHR4	7247.81	9294.06	10178.9
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	SLLECSAEEIAGK	SLLEC(UniMod:4)SAEEIAGK	2	SLLEC(UniMod:4)SAEEIAGK2	7245.67	9311.08	5194.45
Q9QYJ4	Q9QYJ4	ABCB9_RAT	Abcb9	ABC-type oligopeptide transporter ABCB9	1	SLLEDIR	SLLEDIR	1	SLLEDIR1	123547	101440	103090
Q9QYJ4	Q9QYJ4	ABCB9_RAT	Abcb9	ABC-type oligopeptide transporter ABCB9	1	SLLEDIR	SLLEDIR	2	SLLEDIR2	306154	289660	275205
P26817	P26817;P26819	ARBK1_RAT	Grk2	Beta-adrenergic receptor kinase 1	0	SLLEGLLQR	SLLEGLLQR	2	SLLEGLLQR2	2034.92	13378.1	8147.39
Q6IFV4	Q6IFV4	K1C13_RAT	Krt13	Keratin, type I cytoskeletal 13	1	SLLEGQDAK	SLLEGQDAK	2	SLLEGQDAK2		65136.6	
P30839	P30839	AL3A2_RAT	Aldh3a2	Aldehyde dehydrogenase family 3 member A2	1	SLLEGQK	SLLEGQK	2	SLLEGQK2	86798.5	89304.4	86762.9
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	SLLEKELESVGIR	SLLEKELESVGIR	3	SLLEKELESVGIR3	8883.84	14676.7	18092
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	SLLEMEK	SLLEMEK	2	SLLEMEK2	226497	187644	188966
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	SLLEMMLESALTDIK	SLLEMMLESALTDIK	2	SLLEMMLESALTDIK2		2556.76	4473.28
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	SLLENQSLGGSCESLK	SLLENQSLGGSC(UniMod:4)ESLK	2	SLLENQSLGGSC(UniMod:4)ESLK2	9457.42	10712.4	6092.18
D3ZCK2	D3ZCK2	D3ZCK2_RAT	Nkiras2	NFKB inhibitor interacting Ras-like 2	1	SLLEPFIYLASK	SLLEPFIYLASK	2	SLLEPFIYLASK2	9659.62	8156.16	13516.2
D3ZHK4	D3ZHK4	D3ZHK4_RAT	Rb1cc1	RB1-inducible coiled-coil 1	1	SLLEQETENLR	SLLEQETENLR	2	SLLEQETENLR2	4373.98	1247.84	
A0A8I6ABN1	A0A8I6ABN1	A0A8I6ABN1_RAT	Snx19	Sorting nexin 19	1	SLLESFLR	SLLESFLR	2	SLLESFLR2	13017.3	13120.9	7745.48
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	SLLEVVVLSR	SLLEVVVLSR	2	SLLEVVVLSR2	2245.59	8233.6	6354.67
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	SLLEYWK	SLLEYWK	2	SLLEYWK2	16934.7	23195.5	20478.4
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	SLLFCNR	SLLFC(UniMod:4)NR	2	SLLFC(UniMod:4)NR2	25395	19943.5	18368.5
Q03114	Q03114	CDK5_RAT	Cdk5	Cyclin-dependent kinase 5	1	SLLFQLLK	SLLFQLLK	2	SLLFQLLK2	12962	26499	19005.7
Q4KLH5	A0A8I6AVV4;Q4KLH5	AGFG1_RAT	Agfg1	Arf-GAP domain and FG repeat-containing protein 1	0	SLLGESAPALHLNK	SLLGESAPALHLNK	3	SLLGESAPALHLNK3	16788.1	15273.6	21329.8
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	SLLGLDSGDLQGGSASSSDPGTHVR	SLLGLDSGDLQGGSASSSDPGTHVR	3	SLLGLDSGDLQGGSASSSDPGTHVR3	12247.7	13247.1	10919.3
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	SLLGLGLPSGGFHDR	SLLGLGLPSGGFHDR	2	SLLGLGLPSGGFHDR2	27386.1	26809.1	23365.9
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	SLLGLGLPSGGFHDR	SLLGLGLPSGGFHDR	3	SLLGLGLPSGGFHDR3	146844	164275	144723
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	SLLGLSEEK	SLLGLSEEK	1	SLLGLSEEK1	2355.71	816.396	583.546
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	SLLGLSEEK	SLLGLSEEK	2	SLLGLSEEK2	208583	215733	231041
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	SLLGLSEEKRPADVPTVEPR	SLLGLSEEKRPADVPTVEPR	4	SLLGLSEEKRPADVPTVEPR4	1652.5	6976.04	5386.55
P58405	P58405	STRN3_RAT	Strn3	Striatin-3	1	SLLGLSNSEPNGSIEAK	SLLGLSNSEPNGSIEAK	2	SLLGLSNSEPNGSIEAK2	5698.18	6220.96	9554.85
E9PU02	E9PU02	E9PU02_RAT	Trappc9	Trafficking protein particle complex subunit 9	1	SLLGQSMSTK	SLLGQSMSTK	2	SLLGQSMSTK2	8839.02	12166.6	12399
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	SLLHGDFDALSSSSGLFSYVR	SLLHGDFDALSSSSGLFSYVR	3	SLLHGDFDALSSSSGLFSYVR3	19422.1	25311.6	29247.6
A0A8I6G3M2	A0A8I6G3M2	A0A8I6G3M2_RAT	ENSRNOG00000068055	Ig-like domain-containing protein	1	SLLHSNGK	SLLHSNGK	1	SLLHSNGK1		1222.06	1192.78
A0A8I6G3M2	A0A8I6G3M2	A0A8I6G3M2_RAT	ENSRNOG00000068055	Ig-like domain-containing protein	1	SLLHSNGK	SLLHSNGK	2	SLLHSNGK2	95069.6	86806.3	84266.2
B2RZ17	B2RZ17	FBXW2_RAT	Fbxw2	F-box/WD repeat-containing protein 2	1	SLLHSPGDYILLSADK	SLLHSPGDYILLSADK	3	SLLHSPGDYILLSADK3	3541.63	7511.61	2925.16
Q6AY23	Q6AY23;D3ZXI0	P5CR2_RAT	Pycr2	Pyrroline-5-carboxylate reductase 2	0	SLLINAVEASCIR	SLLINAVEASC(UniMod:4)IR	2	SLLINAVEASC(UniMod:4)IR2	20135.6	20539.9	12052.4
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	SLLIPYLDNLVK	SLLIPYLDNLVK	2	SLLIPYLDNLVK2	47572.6	58548.3	59635.4
Q5XII9	Q5XII9	MFR1L_RAT	Mtfr1l	Mitochondrial fission regulator 1-like	1	SLLKEEDPAVLISEVLR	SLLKEEDPAVLISEVLR	3	SLLKEEDPAVLISEVLR3	19752.1	12950.8	11984
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	SLLKPFCAALLK	SLLKPFC(UniMod:4)AALLK	3	SLLKPFC(UniMod:4)AALLK3	35091.8	35646.9	36131.4
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	SLLLAGAAEYDNFFQHLR	SLLLAGAAEYDNFFQHLR	3	SLLLAGAAEYDNFFQHLR3	16097.9	14464.4	17528.7
Q4QQW8	Q4QQW8	PLBL2_RAT	Plbd2	Putative phospholipase B-like 2	1	SLLLDAASGQLR	SLLLDAASGQLR	2	SLLLDAASGQLR2	3659.75		
A0A8I6ACK9	A0A8I6A0D0;A0A8I6ACK9;Q498U1;A0A8I5ZW97	A0A8I6ACK9_RAT	Abcg3l3	ATP-binding cassette, subfamily G (WHITE), member 3-like 3	0	SLLLDVLAAR	SLLLDVLAAR	2	SLLLDVLAAR2	52641.9	60111.4	71111.3
G3V9M3	G3V9M3	G3V9M3_RAT	Wdr47	WD repeat domain 47	1	SLLLENTECHSIYEESPER	SLLLENTEC(UniMod:4)HSIYEESPER	3	SLLLENTEC(UniMod:4)HSIYEESPER3	9243.16	5693.95	9590.89
Q68FT3	Q68FT3	PYRD2_RAT	Pyroxd2	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2	1	SLLLGTDVAENQK	SLLLGTDVAENQK	2	SLLLGTDVAENQK2	32137.2	19710.2	26822.5
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	SLLLIGSPTWK	SLLLIGSPTWK	2	SLLLIGSPTWK2	6.18718e+06	6.50893e+06	6.38545e+06
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	SLLLIGSPTWK	SLLLIGSPTWK	3	SLLLIGSPTWK3	3598.24	2184.81	5581.94
D3ZQ30	D3ZQ30	D3ZQ30_RAT	Telo2	Telomere length regulation protein TEL2 homolog	1	SLLLLER	SLLLLER	2	SLLLLER2	14177.7	12929.9	11944.5
B2RYB1	B2RYB1	B2RYB1_RAT	Txndc11	Thioredoxin domain containing 11	1	SLLLNNELK	SLLLNNELK	2	SLLLNNELK2	5924.62		7202.36
A0A0G2K583	A0A0G2K583	A0A0G2K583_RAT	Mtap	S-methyl-5'-thioadenosine phosphorylase	1	SLLLTTIPQIGSMEWSETLR	SLLLTTIPQIGSMEWSETLR	3	SLLLTTIPQIGSMEWSETLR3	4679.31		6617.11
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	SLLLVLQPPAN	SLLLVLQPPAN	2	SLLLVLQPPAN2	16095.9	16763	
F7FBG3	F7FBG3	F7FBG3_RAT	Commd7	COMM domain containing 7	1	SLLLVPNGALK	SLLLVPNGALK	2	SLLLVPNGALK2	9403.31	13838	11583.7
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	SLLNIMMLVPHR	SLLNIMMLVPHR	3	SLLNIMMLVPHR3	2954.74	5799.89	4995.23
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	SLLNSLEEAK	SLLNSLEEAK	2	SLLNSLEEAK2	45806.2	43583.4	32353.7
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	SLLNSLEEAKK	SLLNSLEEAKK	2	SLLNSLEEAKK2	396358	416450	388136
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	SLLNSLEEAKK	SLLNSLEEAKK	3	SLLNSLEEAKK3	30556.5	25415.2	23688.7
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	SLLNSLEEAKKK	SLLNSLEEAKKK	3	SLLNSLEEAKKK3	30958.8	32363	53439.6
Q3T1I4	Q3T1I4	PRRC1_RAT	Prrc1	Protein PRRC1	1	SLLNVTR	SLLNVTR	2	SLLNVTR2	78214.5	73218.8	65321.8
B0BNJ4	B0BNJ4	B0BNJ4_RAT	Ethe1	ETHE1, persulfide dioxygenase	1	SLLPGCQSVISR	SLLPGC(UniMod:4)QSVISR	2	SLLPGC(UniMod:4)QSVISR2	103181	105866	67046.2
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	SLLPGLLPGPADK	SLLPGLLPGPADK	2	SLLPGLLPGPADK2	79241.2	83299.1	83071.9
A0A8I6A8Q1	A0A8I6A8Q1	A0A8I6A8Q1_RAT	A2ml1	Alpha-2-macroglobulin-like 1	1	SLLPILDR	SLLPILDR	2	SLLPILDR2	46077	27306	41199.2
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	SLLPVVLEQLDDYNAK	SLLPVVLEQLDDYNAK	2	SLLPVVLEQLDDYNAK2	9809.17	9457.39	6407.18
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	SLLPVVLEQLDDYNAK	SLLPVVLEQLDDYNAK	3	SLLPVVLEQLDDYNAK3	2388.75	4600.95	4048.72
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	SLLQALNEVK	SLLQALNEVK	2	SLLQALNEVK2	319047	369506	314838
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	SLLQGTILQYVK	SLLQGTILQYVK	2	SLLQGTILQYVK2	22104.3	28084.9	11339.3
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	SLLQPSK	SLLQPSK	1	SLLQPSK1	8577.81		7992.31
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	SLLQQQIIHEPK	SLLQQQIIHEPK	2	SLLQQQIIHEPK2	166649	134250	136108
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	SLLQQQIIHEPK	SLLQQQIIHEPK	3	SLLQQQIIHEPK3	1.59277e+06	1.48099e+06	1.56562e+06
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	SLLQQQIIHEPKEDTVTR	SLLQQQIIHEPKEDTVTR	3	SLLQQQIIHEPKEDTVTR3	73179.4	76840.8	61286.8
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	SLLQQQIIHEPKEDTVTR	SLLQQQIIHEPKEDTVTR	4	SLLQQQIIHEPKEDTVTR4	213973	213910	234121
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	SLLQQQIIHEPKEDTVTRR	SLLQQQIIHEPKEDTVTRR	4	SLLQQQIIHEPKEDTVTRR4	28797	32765.2	31826.3
D3ZXB1	D3ZXB1	D3ZXB1_RAT	Map4k2	Mitogen-activated protein kinase kinase kinase kinase 2	1	SLLQSVQEALEER	SLLQSVQEALEER	2	SLLQSVQEALEER2	28221.1	11328.8	10922.4
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	SLLQTTFLVDNKK	SLLQTTFLVDNKK	2	SLLQTTFLVDNKK2	2852.11	2091.06	1911.81
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	SLLQTTFLVDNKK	SLLQTTFLVDNKK	3	SLLQTTFLVDNKK3	17731.3	18021.8	17739.8
Q66H54	Q66H54	FHI1B_RAT	Fhip1b	FHF complex subunit HOOK-interacting protein 1B	1	SLLQVLGSVK	SLLQVLGSVK	2	SLLQVLGSVK2	5006.65	4523.85	6796.02
Q02293	Q02293	FNTB_RAT	Fntb	Protein farnesyltransferase subunit beta	1	SLLQWVTSR	SLLQWVTSR	2	SLLQWVTSR2	5905.71	11260.1	4704.64
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	SLLSDVEELDEK	SLLSDVEELDEK	2	SLLSDVEELDEK2	21527.5	21906.7	24791.1
A0A8I5Y5Z6	A0A8I5Y5Z6	A0A8I5Y5Z6_RAT	Xrcc4	X-ray repair cross complementing 4	1	SLLSEVQQLEK	SLLSEVQQLEK	2	SLLSEVQQLEK2	9542.98	11174.9	6105.04
Q63484	Q63484	AKT3_RAT	Akt3	RAC-gamma serine/threonine-protein kinase	1	SLLSGLLIKDPNK	SLLSGLLIKDPNK	3	SLLSGLLIKDPNK3	8842.73	6728.95	2383.42
Q63484	Q63484	AKT3_RAT	Akt3	RAC-gamma serine/threonine-protein kinase	1	SLLSGLLIKDPNKR	SLLSGLLIKDPNKR	4	SLLSGLLIKDPNKR4	4769.41	3135.64	10008.1
P47196	P47196	AKT1_RAT	Akt1	RAC-alpha serine/threonine-protein kinase	1	SLLSGLLK	SLLSGLLK	2	SLLSGLLK2	21342.5	25716.5	32435.4
B2RYI0	B2RYI0	WDR91_RAT	Wdr91	WD repeat-containing protein 91	1	SLLSGPVPGEASWTHQR	SLLSGPVPGEASWTHQR	3	SLLSGPVPGEASWTHQR3	24353.4	23845.8	26716.7
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	SLLSILQR	SLLSILQR	2	SLLSILQR2		70358.5	53540
A0A0G2JYJ8	A0A0G2JYJ8	A0A0G2JYJ8_RAT	Ttc23l	Tetratricopeptide repeat domain 23-like	1	SLLSLLQR	SLLSLLQR	2	SLLSLLQR2	63153.9		
Q9JHW1	Q9JHW1	CBPD_RAT	Cpd	Carboxypeptidase D	1	SLLSMLVEVHK	SLLSMLVEVHK	3	SLLSMLVEVHK3	2164.74	3155.84	
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	SLLSNLDEIK	SLLSNLDEIK	2	SLLSNLDEIK2	36182.1	41220.6	30592
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	SLLSNLDEIKK	SLLSNLDEIKK	3	SLLSNLDEIKK3	25483.7	25454.7	21559.8
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	SLLSQEKEELQTSLSR	SLLSQEKEELQTSLSR	3	SLLSQEKEELQTSLSR3	16523.3	10361.7	9687.89
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	SLLSSASATVATVGQGISNVIEK	SLLSSASATVATVGQGISNVIEK	3	SLLSSASATVATVGQGISNVIEK3	21815.7	20118.8	19509.8
A0A8I5ZXD6	D4A5F0;A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	0	SLLSSASATVGHGLTAVK	SLLSSASATVGHGLTAVK	2	SLLSSASATVGHGLTAVK2	5169.57	1661.68	2326.57
A0A8I5ZXD6	D4A5F0;A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	0	SLLSSASATVGHGLTAVK	SLLSSASATVGHGLTAVK	3	SLLSSASATVGHGLTAVK3	137224	123077	135795
F1M784	F1M784	F1M784_RAT	Pik3ap1	Phosphoinositide-3-kinase adaptor protein 1	1	SLLSVSSGMEGDNEDNEVPEITR	SLLSVSSGMEGDNEDNEVPEITR	3	SLLSVSSGMEGDNEDNEVPEITR3	5445.57	5707.73	3281.56
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	SLLTAMFVK	SLLTAMFVK	2	SLLTAMFVK2	116836	118795	103875
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	SLLTSRPEDATHSR	SLLTSRPEDATHSR	3	SLLTSRPEDATHSR3	522008	530584	373993
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	SLLTSRPEDATHSR	SLLTSRPEDATHSR	4	SLLTSRPEDATHSR4	351379	399598	423143
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	SLLTTFK	SLLTTFK	2	SLLTTFK2	20284	23317.1	18991.3
Q68FY0	Q68FY0	QCR1_RAT	Uqcrc1	Cytochrome b-c1 complex subunit 1, mitochondrial	1	SLLTYGR	SLLTYGR	2	SLLTYGR2	437992	433937	458762
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	SLLVAGAAQYDCFFQHLR	SLLVAGAAQYDC(UniMod:4)FFQHLR	3	SLLVAGAAQYDC(UniMod:4)FFQHLR3	16624.9	26818.9	26646.4
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	SLLVIPNTLAVNAAQDSTDLVAK	SLLVIPNTLAVNAAQDSTDLVAK	3	SLLVIPNTLAVNAAQDSTDLVAK3	94692.1	128267	107306
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	SLLVPVDEPK	SLLVPVDEPK	2	SLLVPVDEPK2	79844.8	74794	77900.4
P21531	P21531	RL3_RAT	Rpl3	Large ribosomal subunit protein uL3	1	SLLVQTK	SLLVQTK	2	SLLVQTK2	54908	53976.4	49689.9
O08984	O08984	LBR_RAT	Lbr	Delta(14)-sterol reductase LBR	1	SLLVSGWWGFVR	SLLVSGWWGFVR	2	SLLVSGWWGFVR2	1825.38		2029.48
P97697	P97697	IMPA1_RAT	Impa1	Inositol monophosphatase 1	1	SLLVTELGSSR	SLLVTELGSSR	2	SLLVTELGSSR2	53528.8	51223.8	47172.7
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	SLLWTETFMNK	SLLWTETFMNK	2	SLLWTETFMNK2	313547	263159	272717
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	SLMAQLQETMR	SLMAQLQETMR	2	SLMAQLQETMR2	27767.6	33136.8	35905.6
Q5I0K8	Q5I0K8	RT07_RAT	Mrps7	Small ribosomal subunit protein uS7m	1	SLMAQTLEAVK	SLMAQTLEAVK	2	SLMAQTLEAVK2	5465.09	4266.81	12285.8
P16617	P16617	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	1	SLMDEVVK	SLMDEVVK	2	SLMDEVVK2	364695	329532	373614
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	SLMDGYCMFNHLAVAAR	SLMDGYC(UniMod:4)MFNHLAVAAR	2	SLMDGYC(UniMod:4)MFNHLAVAAR2		3693.4	
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	SLMDGYCMFNHLAVAAR	SLMDGYC(UniMod:4)MFNHLAVAAR	3	SLMDGYC(UniMod:4)MFNHLAVAAR3	28326.6	30453.4	35302
Q9JI92	Q9JI92	SDCB1_RAT	Sdcbp	Syntenin-1	1	SLMDHTIPEV	SLMDHTIPEV	2	SLMDHTIPEV2	530270	516852	549022
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	SLMDQYFAR	SLMDQYFAR	2	SLMDQYFAR2	124723	134995	125298
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	SLMELVEYYK	SLMELVEYYK	2	SLMELVEYYK2	83542.7	109289	94065
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	SLMESGANR	SLMESGANR	2	SLMESGANR2	283187	297192	285657
A0A0U1RS05	A0A0U1RS05	A0A0U1RS05_RAT	Tlr13	Toll-like receptor 13	1	SLMFFDVYGNK	SLMFFDVYGNK	2	SLMFFDVYGNK2		4724.02	
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	SLMPQIIPGK	SLMPQIIPGK	2	SLMPQIIPGK2	15183.2	9632.4	3711.6
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	SLMPQIIPGKK	SLMPQIIPGKK	3	SLMPQIIPGKK3	29304.5	32885.1	22512.3
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	SLMPYFLLTQAVR	SLMPYFLLTQAVR	2	SLMPYFLLTQAVR2	25223.2	17202.7	29300.8
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	SLMPYFLLTQAVR	SLMPYFLLTQAVR	3	SLMPYFLLTQAVR3	25190.5	23002.1	24324.6
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	SLMQEIHDSIVNK	SLMQEIHDSIVNK	2	SLMQEIHDSIVNK2	3943.85	4781.63	
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	SLMQEIHDSIVNK	SLMQEIHDSIVNK	3	SLMQEIHDSIVNK3		33470.5	42252.1
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	SLMSGGLAEVPGLSINFAK	SLMSGGLAEVPGLSINFAK	2	SLMSGGLAEVPGLSINFAK2	36066.2	33043.1	33112.4
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	SLMSGGLAEVPGLSINFAK	SLMSGGLAEVPGLSINFAK	3	SLMSGGLAEVPGLSINFAK3	9015.16	6926.49	7149.66
D3ZDZ1	D3ZDZ1	D3ZDZ1_RAT	Apbb1ip	Amyloid beta precursor protein binding family B member 1 interacting protein	1	SLMVDER	SLMVDER	2	SLMVDER2	10358.8	11192.2	12187.3
A0A8I5ZU98	A0A8I5ZU98	A0A8I5ZU98_RAT	Osbpl5	Oxysterol-binding protein	1	SLMWVLLR	SLMWVLLR	2	SLMWVLLR2	4678.66	2537.37	3246.51
Q5PQL5	Q5PQL5	PTSS1_RAT	Ptdss1	Phosphatidylserine synthase 1	1	SLMYWLDPNLR	SLMYWLDPNLR	2	SLMYWLDPNLR2	2548.61	6423.44	3573.74
P45479	P45479	PPT1_RAT	Ppt1	Palmitoyl-protein thioesterase 1	1	SLNAGAYSK	SLNAGAYSK	2	SLNAGAYSK2	20066.3	23538.2	27762.8
A0A8I5ZXB9	A0A8I5ZXB9	A0A8I5ZXB9_RAT	Kifap3	Kinesin-associated protein 3	1	SLNANTDITSLAR	SLNANTDITSLAR	2	SLNANTDITSLAR2	14808.4	10575.6	9159.48
Q9QWG5	Q9QWG5	INP4B_RAT	Inpp4b	Type II inositol 3,4-bisphosphate 4-phosphatase	1	SLNCIIAK	SLNC(UniMod:4)IIAK	2	SLNC(UniMod:4)IIAK2	22026.9	14992.2	23072.7
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	SLNCSGEEASESLMNLSPFDMK	SLNC(UniMod:4)SGEEASESLMNLSPFDMK	3	SLNC(UniMod:4)SGEEASESLMNLSPFDMK3		7289.97	3426.88
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	SLNDGLGQSSER	SLNDGLGQSSER	2	SLNDGLGQSSER2	50246.6	60171.7	57074.7
Q642B0	Q642B0	Q642B0_RAT	Gpc4	Glypican 4	1	SLNDMFVK	SLNDMFVK	2	SLNDMFVK2	52426.6	49091.1	35591.4
Q66H59	Q66H59	NPL_RAT	Npl	N-acetylneuraminate lyase	1	SLNFLSFPGLK	SLNFLSFPGLK	2	SLNFLSFPGLK2	38425.7	34462.5	30259.3
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	SLNFVLSANMHGGAVVANYPYDK	SLNFVLSANMHGGAVVANYPYDK	3	SLNFVLSANMHGGAVVANYPYDK3	139408	85888.8	84479.4
P52555	P52555	ERP29_RAT	Erp29	Endoplasmic reticulum resident protein 29	1	SLNILTAFR	SLNILTAFR	2	SLNILTAFR2	64089.5	49938.3	55601.8
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	SLNLNIFLK	SLNLNIFLK	2	SLNLNIFLK2	243405	279358	195294
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	SLNLPVGSSQVLVPR	SLNLPVGSSQVLVPR	2	SLNLPVGSSQVLVPR2	35496.4	46082.6	42754.9
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	SLNLPVGSSQVLVPR	SLNLPVGSSQVLVPR	3	SLNLPVGSSQVLVPR3	2743.43	3152.77	2446.45
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	SLNLTEDVYKPR	SLNLTEDVYKPR	3	SLNLTEDVYKPR3	3241.37	7606.78	6475.67
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	SLNLVDSPQPFLK	SLNLVDSPQPFLK	2	SLNLVDSPQPFLK2	27685.6	25845.5	21142.3
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	SLNNAPLWR	SLNNAPLWR	2	SLNNAPLWR2	37228.2	34854	44586.3
P02466	P02466	CO1A2_RAT	Col1a2	Collagen alpha-2(I) chain	1	SLNNQIETLLTPEGSR	SLNNQIETLLTPEGSR	2	SLNNQIETLLTPEGSR2	4709.69	4560.95	3975.3
G3V9M3	G3V9M3	G3V9M3_RAT	Wdr47	WD repeat domain 47	1	SLNPALDGLTCGLTSHDK	SLNPALDGLTC(UniMod:4)GLTSHDK	3	SLNPALDGLTC(UniMod:4)GLTSHDK3	10706.2	5972.84	5268.71
P83953	P83953	IMA5_RAT	Kpna1	Importin subunit alpha-5	1	SLNPDEMR	SLNPDEMR	2	SLNPDEMR2	170543	114950	144476
P83953	P83953	IMA5_RAT	Kpna1	Importin subunit alpha-5	1	SLNPDEMRR	SLNPDEMRR	2	SLNPDEMRR2			4182.39
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	SLNPEDPTTPFR	SLNPEDPTTPFR	2	SLNPEDPTTPFR2	20169.2	29505.7	19207
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	SLNPNLLAVVTESTDVHHER	SLNPNLLAVVTESTDVHHER	4	SLNPNLLAVVTESTDVHHER4	49502.9	28983.3	46503.6
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	SLNPPLTIVR	SLNPPLTIVR	2	SLNPPLTIVR2	18586.1	30275.2	17588
P04642	P04642;A0A8I6ASS6	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	SLNPQLGTDADK	SLNPQLGTDADK	2	SLNPQLGTDADK2	21847.5	12278.9	25249.7
P04642	P04642;A0A8I6ASS6	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	SLNPQLGTDADKEQWK	SLNPQLGTDADKEQWK	2	SLNPQLGTDADKEQWK2	66797.1	44310.5	44972.5
P04642	P04642;A0A8I6ASS6	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	SLNPQLGTDADKEQWK	SLNPQLGTDADKEQWK	3	SLNPQLGTDADKEQWK3	987485	919165	953496
P04642	P04642	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	1	SLNPQLGTDADKEQWKDVHK	SLNPQLGTDADKEQWKDVHK	3	SLNPQLGTDADKEQWKDVHK3	39736.7	33593.3	35306.6
P04642	P04642	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	1	SLNPQLGTDADKEQWKDVHK	SLNPQLGTDADKEQWKDVHK	4	SLNPQLGTDADKEQWKDVHK4	81535.4	89403.1	130645
A0A0G2K543	A0A0G2K543	A0A0G2K543_RAT	C2cd5	C2 calcium-dependent domain containing 5	1	SLNPQWNSEWFK	SLNPQWNSEWFK	2	SLNPQWNSEWFK2	5928.2		8439.74
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	SLNQPTPPPMPILSQSEAK	SLNQPTPPPMPILSQSEAK	3	SLNQPTPPPMPILSQSEAK3	25779.7	28270.7	28426.7
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	SLNSASYLYEVMEQPHHGSLAWR	SLNSASYLYEVMEQPHHGSLAWR	3	SLNSASYLYEVMEQPHHGSLAWR3	8987.68	4737	7419.15
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	SLNSASYLYEVMEQPHHGSLAWR	SLNSASYLYEVMEQPHHGSLAWR	4	SLNSASYLYEVMEQPHHGSLAWR4	41994.4	54760.9	33715.3
O88279	O88279;Q9WVC1	SLIT1_RAT	Slit1	Slit homolog 1 protein	0	SLNSLVLYGNK	SLNSLVLYGNK	2	SLNSLVLYGNK2	5335.84	5903.4	
Q99MM4	Q99MM4	TRAD1_RAT	Trafd1	TRAF-type zinc finger domain-containing protein 1	1	SLNTGSSSIR	SLNTGSSSIR	2	SLNTGSSSIR2	12480	7730.21	9832.15
Q5XIN4	Q5XIN4	Q5XIN4_RAT	Mtmr9	Myotubularin related protein 9	1	SLNVAQQAR	SLNVAQQAR	2	SLNVAQQAR2	92878	116124	95896.8
D3ZXK7	D3ZXK7	RN123_RAT	Rnf123	E3 ubiquitin-protein ligase RNF123	1	SLNVEQR	SLNVEQR	2	SLNVEQR2	26818.2	34947.9	25421.5
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	SLNVQLGR	SLNVQLGR	2	SLNVQLGR2	62474.3	53813.7	66448.5
Q9Z0J5	Q9Z0J5	TRXR2_RAT	Txnrd2	Thioredoxin reductase 2, mitochondrial	1	SLNWGHR	SLNWGHR	2	SLNWGHR2	6531.73	8183.25	7652.05
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	SLNYCGHIYTPISCK	SLNYC(UniMod:4)GHIYTPISC(UniMod:4)K	2	SLNYC(UniMod:4)GHIYTPISC(UniMod:4)K2	2777.71		
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	SLNYCGHIYTPISCK	SLNYC(UniMod:4)GHIYTPISC(UniMod:4)K	3	SLNYC(UniMod:4)GHIYTPISC(UniMod:4)K3	25700.9	19673	22398.8
Q5I0D1	Q5I0D1	GLOD4_RAT	Glod4	Glyoxalase domain-containing protein 4	1	SLNYWSNLLGMK	SLNYWSNLLGMK	2	SLNYWSNLLGMK2	16760.8	10518.1	22233.8
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	SLPAGDALYLSFNPPQPSR	SLPAGDALYLSFNPPQPSR	3	SLPAGDALYLSFNPPQPSR3	74532.5	85664.5	94049.7
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	SLPASLAEPDFVMTDFAK	SLPASLAEPDFVMTDFAK	2	SLPASLAEPDFVMTDFAK2	151606	140556	146542
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	SLPASLAEPDFVMTDFAK	SLPASLAEPDFVMTDFAK	3	SLPASLAEPDFVMTDFAK3	29845	9527.52	20482.9
D3ZWS0	D3ZWS0	D3ZWS0_RAT	Scrib	Scribble planar cell polarity protein	1	SLPASLSFLVK	SLPASLSFLVK	2	SLPASLSFLVK2	7561.48	7992.02	13585.1
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	SLPAVHR	SLPAVHR	2	SLPAVHR2	42058.1	53488.1	48153.9
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	SLPCDICK	SLPC(UniMod:4)DIC(UniMod:4)K	2	SLPC(UniMod:4)DIC(UniMod:4)K2	110468	206301	230568
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	SLPDCTSHPNSISIDAGPR	SLPDC(UniMod:4)TSHPNSISIDAGPR	3	SLPDC(UniMod:4)TSHPNSISIDAGPR3	132891	143541	116961
P52873	P52873	PYC_RAT	Pc	Pyruvate carboxylase, mitochondrial	1	SLPDLGLR	SLPDLGLR	2	SLPDLGLR2	15821.8	26007.6	14687.2
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	SLPDSYYWSAPAPYLR	SLPDSYYWSAPAPYLR	2	SLPDSYYWSAPAPYLR2	19770.7	21387.8	12356.8
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	SLPEDENKETGMESVIETVAHFK	SLPEDENKETGMESVIETVAHFK	4	SLPEDENKETGMESVIETVAHFK4	5707.94	1712.35	7389.89
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	SLPEGVVDGIEIYSTK	SLPEGVVDGIEIYSTK	2	SLPEGVVDGIEIYSTK2	1.18612e+06	1.15332e+06	1.16148e+06
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	SLPEGVVDGIEIYSTK	SLPEGVVDGIEIYSTK	3	SLPEGVVDGIEIYSTK3	83632.7	82553.8	73127.4
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	SLPEGVVDGIEIYSTK	SLPEGVVDGIEIYSTK	4	SLPEGVVDGIEIYSTK4	325746	366420	373776
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	SLPEGVVDGIEIYSTKISCK	SLPEGVVDGIEIYSTKISC(UniMod:4)K	3	SLPEGVVDGIEIYSTKISC(UniMod:4)K3	67809	137137	162816
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	SLPEGVVDGIEIYSTKISCKVTSR	SLPEGVVDGIEIYSTKISC(UniMod:4)KVTSR	3	SLPEGVVDGIEIYSTKISC(UniMod:4)KVTSR3	22547.7	31823.7	23195.6
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	SLPEGVVDGIEIYSTKISCKVTSR	SLPEGVVDGIEIYSTKISC(UniMod:4)KVTSR	4	SLPEGVVDGIEIYSTKISC(UniMod:4)KVTSR4	75603.6	83043.6	93556.6
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	SLPEPLMTYELHR	SLPEPLMTYELHR	2	SLPEPLMTYELHR2	37730.1	38363	26397.1
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	SLPEPLMTYELHR	SLPEPLMTYELHR	3	SLPEPLMTYELHR3	83505.1	62659.3	91043.9
Q2KMM2	Q2KMM2	TPPC1_RAT	Trappc1	Trafficking protein particle complex subunit 1	1	SLPFFSAR	SLPFFSAR	2	SLPFFSAR2	99389	99598.2	116102
Q00972	Q00972	BCKD_RAT	Bckdk	[3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial	1	SLPFIIGCNPTILHVHELYIR	SLPFIIGC(UniMod:4)NPTILHVHELYIR	4	SLPFIIGC(UniMod:4)NPTILHVHELYIR4	7171.92	14664.4	10223.7
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	SLPGTAPCLK	SLPGTAPC(UniMod:4)LK	2	SLPGTAPC(UniMod:4)LK2	162564	165355	166840
O08775	O08775	VGFR2_RAT	Kdr	Vascular endothelial growth factor receptor 2	1	SLPGTVAK	SLPGTVAK	2	SLPGTVAK2	94253.3	95252.1	95422.5
Q9JLU4	Q9JLU4	SHAN3_RAT	Shank3	SH3 and multiple ankyrin repeat domains protein 3	1	SLPHQLLLQR	SLPHQLLLQR	3	SLPHQLLLQR3	8066.54	13658.4	10221.4
A0A8I6AJP4	A0A8I6AJP4	A0A8I6AJP4_RAT	Phactr4	Phosphatase and actin regulator 4	1	SLPITIEMLK	SLPITIEMLK	2	SLPITIEMLK2	24038.6	22432.2	7556.4
Q05096	Q05096	MYO1B_RAT	Myo1b	Unconventional myosin-Ib	1	SLPIYSPEK	SLPIYSPEK	2	SLPIYSPEK2	21927.1	32908.3	19046.8
A0A8I5ZXL6	A0A8I5ZXL6	A0A8I5ZXL6_RAT	Plekha7	Pleckstrin homology domain containing A7	1	SLPLDQTLPR	SLPLDQTLPR	2	SLPLDQTLPR2	10540.7		4458.91
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	SLPLEYSYGEYR	SLPLEYSYGEYR	2	SLPLEYSYGEYR2	94531.5	100054	106849
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	SLPLEYSYGEYRDLLR	SLPLEYSYGEYRDLLR	3	SLPLEYSYGEYRDLLR3	14920.6	15083.8	28666
O08773	O08773	RGS14_RAT	Rgs14	Regulator of G-protein signaling 14	1	SLPLGVEELGQLPLAEGR	SLPLGVEELGQLPLAEGR	2	SLPLGVEELGQLPLAEGR2	7241.47	11250.3	13105.8
O08773	O08773	RGS14_RAT	Rgs14	Regulator of G-protein signaling 14	1	SLPLGVEELGQLPLAEGR	SLPLGVEELGQLPLAEGR	3	SLPLGVEELGQLPLAEGR3	9056.04	11827.2	9496.08
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	SLPNLSR	SLPNLSR	2	SLPNLSR2	357173	395935	372129
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	SLPNWTNMAQPK	SLPNWTNMAQPK	2	SLPNWTNMAQPK2	56440	84157.2	69727.3
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	SLPPADISDIIHSTEK	SLPPADISDIIHSTEK	3	SLPPADISDIIHSTEK3	21627	9185.49	12180.1
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	SLPPGLLMPTTK	SLPPGLLMPTTK	2	SLPPGLLMPTTK2	1.70323e+07	1.77252e+07	1.74907e+07
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	SLPPGLLMPTTK	SLPPGLLMPTTK	3	SLPPGLLMPTTK3	66302.5	77189.5	72417
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	SLPPGLLR	SLPPGLLR	2	SLPPGLLR2	298553	321541	291053
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	SLPQEWLWCETWCDDASK	SLPQEWLWC(UniMod:4)ETWC(UniMod:4)DDASK	3	SLPQEWLWC(UniMod:4)ETWC(UniMod:4)DDASK3	12006.3	12805.4	7480.01
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	SLPQPQK	SLPQPQK	1	SLPQPQK1	147364	128279	131711
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	SLPQPQK	SLPQPQK	2	SLPQPQK2	3.6979e+06	4.24078e+06	3.99067e+06
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	SLPQTGNEAHLFDSGDIFPK	SLPQTGNEAHLFDSGDIFPK	3	SLPQTGNEAHLFDSGDIFPK3	4654.33	12050.7	8060.91
P05545	P05545	SPA3K_RAT	Serpina3k	Serine protease inhibitor A3K	1	SLPQTIPLLNFNR	SLPQTIPLLNFNR	2	SLPQTIPLLNFNR2	98239.1	116713	85955.5
F1M8B7	F1M8B7	F1M8B7_RAT	Chmp2b	Charged multivesicular body protein 2B	1	SLPSASTSK	SLPSASTSK	2	SLPSASTSK2	55030.8	55977.6	42545.4
A0A8I5ZL85	A0A8I5ZL85	A0A8I5ZL85_RAT	Ackr1	Atypical chemokine receptor 1	1	SLPSLSLPAR	SLPSLSLPAR	2	SLPSLSLPAR2		10160.3	5963.88
P11507	P18596;Q64578;P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	0	SLPSVETLGCTSVICSDK	SLPSVETLGC(UniMod:4)TSVIC(UniMod:4)SDK	2	SLPSVETLGC(UniMod:4)TSVIC(UniMod:4)SDK2	1.55852e+06	1.67415e+06	1.65183e+06
P11507	P18596;Q64578;P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	0	SLPSVETLGCTSVICSDK	SLPSVETLGC(UniMod:4)TSVIC(UniMod:4)SDK	3	SLPSVETLGC(UniMod:4)TSVIC(UniMod:4)SDK3	169340	190524	200967
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	SLPSVLVIHLMR	SLPSVLVIHLMR	2	SLPSVLVIHLMR2	9919.6	10396.1	10820.4
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	SLPSVLVIHLMR	SLPSVLVIHLMR	3	SLPSVLVIHLMR3	23978.2	26740.2	26720.6
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	SLPTCLPVCGLPK	SLPTC(UniMod:4)LPVC(UniMod:4)GLPK	2	SLPTC(UniMod:4)LPVC(UniMod:4)GLPK2	8.44547e+06	9.33697e+06	9.34588e+06
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	SLPTCLPVCGLPK	SLPTC(UniMod:4)LPVC(UniMod:4)GLPK	3	SLPTC(UniMod:4)LPVC(UniMod:4)GLPK3	24444.9	23401.6	26057
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	SLPTPAAR	SLPTPAAR	2	SLPTPAAR2	64750.4	75899.7	64646.9
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	SLPTTVPESPNYR	SLPTTVPESPNYR	2	SLPTTVPESPNYR2	11060.2	21881.2	11524.5
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	SLPVCKPVCGLSTHTSGGR	SLPVC(UniMod:4)KPVC(UniMod:4)GLSTHTSGGR	3	SLPVC(UniMod:4)KPVC(UniMod:4)GLSTHTSGGR3	269812	229665	231733
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	SLPVCKPVCGLSTHTSGGR	SLPVC(UniMod:4)KPVC(UniMod:4)GLSTHTSGGR	4	SLPVC(UniMod:4)KPVC(UniMod:4)GLSTHTSGGR4	169113	136806	160878
A0A8I5ZRQ9	A0A8I5ZRQ9	A0A8I5ZRQ9_RAT	Akt1s1	AKT1 substrate 1	1	SLPVSVPVWAFK	SLPVSVPVWAFK	2	SLPVSVPVWAFK2	33576.1	25957.9	17489.1
A0A8I5YCC9	A0A8I5YCC9	A0A8I5YCC9_RAT	Itga5	Integrin subunit alpha 5	1	SLPYGTAMEK	SLPYGTAMEK	2	SLPYGTAMEK2	21655.4	24673.6	33281.3
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	SLPYNQPGTCYTLVALPK	SLPYNQPGTC(UniMod:4)YTLVALPK	3	SLPYNQPGTC(UniMod:4)YTLVALPK3	20301.2	21275.3	26922
Q811U3	Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	1	SLQADTTNTDTALTTLEEALADKER	SLQADTTNTDTALTTLEEALADKER	3	SLQADTTNTDTALTTLEEALADKER3		14655.8	
Q505J8	Q505J8	SYFA_RAT	Farsa	Phenylalanine--tRNA ligase alpha subunit	1	SLQALGEVIEAELR	SLQALGEVIEAELR	2	SLQALGEVIEAELR2	13653.4	20519.4	6867.51
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	SLQAQLQR	SLQAQLQR	2	SLQAQLQR2	142141	200996	198802
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	SLQDIIAILGMDELSEEDK	SLQDIIAILGMDELSEEDK	3	SLQDIIAILGMDELSEEDK3		72025	75172.1
Q5FVQ9	Q5FVQ9	TBCE_RAT	Tbce	Tubulin-specific chaperone E	1	SLQDISLWK	SLQDISLWK	2	SLQDISLWK2	4769.71	10579.3	6300.58
P51886	P51886	LUM_RAT	Lum	Lumican	1	SLQDLQLANNK	SLQDLQLANNK	2	SLQDLQLANNK2	33278.8	41285.9	37285
P51886	P51886	LUM_RAT	Lum	Lumican	1	SLQDLQLANNK	SLQDLQLANNK	3	SLQDLQLANNK3	855246	862873	874813
D4A6U4	D4A6U4	D4A6U4_RAT	Tecpr2	Tectonin beta-propeller repeat containing 2	1	SLQDLSQPGAEETSLLK	SLQDLSQPGAEETSLLK	2	SLQDLSQPGAEETSLLK2	2180.85	4336.79	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	SLQDTAELLSLENHPAK	SLQDTAELLSLENHPAK	2	SLQDTAELLSLENHPAK2	3413.89	4699.86	4262.63
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	SLQDTAELLSLENHPAK	SLQDTAELLSLENHPAK	3	SLQDTAELLSLENHPAK3	21904.8	15287.8	23768.1
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	SLQECLEDMCLIEGTLEGHLGEFHVK	SLQEC(UniMod:4)LEDMC(UniMod:4)LIEGTLEGHLGEFHVK	4	SLQEC(UniMod:4)LEDMC(UniMod:4)LIEGTLEGHLGEFHVK4	12730.4	15458.7	12939.7
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	SLQEEDLLASSSHQR	SLQEEDLLASSSHQR	2	SLQEEDLLASSSHQR2	5250.63	1678.58	3375.8
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	SLQEEDLLASSSHQR	SLQEEDLLASSSHQR	3	SLQEEDLLASSSHQR3	30654	33494.4	26819.5
A0A8J8Y4N8	A0A8J8Y4N8	A0A8J8Y4N8_RAT	Ube2r2	Ubiquitin-conjugating enzyme E2R 2	1	SLQEEPVEGFR	SLQEEPVEGFR	2	SLQEEPVEGFR2	40046.8	41565.4	40270.2
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	SLQEQLSSAR	SLQEQLSSAR	2	SLQEQLSSAR2	26776.7	32299	33431.1
O88277	O88277	FAT2_RAT	Fat2	Protocadherin Fat 2	1	SLQFDQDVYR	SLQFDQDVYR	2	SLQFDQDVYR2	3113.5	3860.99	
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	SLQGDKLEVSSK	SLQGDKLEVSSK	2	SLQGDKLEVSSK2	1992.3		2827.69
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	SLQGDKLEVSSK	SLQGDKLEVSSK	3	SLQGDKLEVSSK3	47685.4	63052.5	56847.9
Q66H15	Q66H15	RMD3_RAT	Rmdn3	Regulator of microtubule dynamics protein 3	1	SLQGLAGEIVGEVR	SLQGLAGEIVGEVR	2	SLQGLAGEIVGEVR2	5389.48	5992.19	9395.02
Q66H15	Q66H15	RMD3_RAT	Rmdn3	Regulator of microtubule dynamics protein 3	1	SLQGLAGEIVGEVR	SLQGLAGEIVGEVR	3	SLQGLAGEIVGEVR3	7223.58	12651.1	7531.32
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	SLQHDNIVK	SLQHDNIVK	2	SLQHDNIVK2	12799.3	8914.29	15539.7
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	SLQHTIAR	SLQHTIAR	2	SLQHTIAR2	117234	176211	154235
D3ZSQ1	D3ZSQ1	D3ZSQ1_RAT	Pcnx3	Pecanex-like protein	1	SLQHTLCGDLVLGR	SLQHTLC(UniMod:4)GDLVLGR	3	SLQHTLC(UniMod:4)GDLVLGR3	19762.1	12897.8	16834.7
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	SLQLEAQTYQR	SLQLEAQTYQR	2	SLQLEAQTYQR2	28107.8	28353.2	27720.2
F1M3J7	F1M3J7	F1M3J7_RAT	Cntnap4	Contactin associated protein family member 4	1	SLQLNGMALDLEER	SLQLNGMALDLEER	2	SLQLNGMALDLEER2	26526.1	29315.9	47769.5
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	SLQLTGFQAYK	SLQLTGFQAYK	2	SLQLTGFQAYK2	4289.49	9575.85	7073.54
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SLQNDAEHAIR	SLQNDAEHAIR	2	SLQNDAEHAIR2	103391	132272	98829.8
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SLQNDAEHAIR	SLQNDAEHAIR	3	SLQNDAEHAIR3	835628	1.17246e+06	1.01618e+06
Q8VHT6	Q8VHT6	AS3MT_RAT	As3mt	Arsenite methyltransferase	1	SLQNVHEEVISR	SLQNVHEEVISR	3	SLQNVHEEVISR3		4006.45	
Q9ERR2	Q9ERR2	COMD5_RAT	Commd5	COMM domain-containing protein 5	1	SLQPSVLMQLK	SLQPSVLMQLK	2	SLQPSVLMQLK2	9276.95	15408.1	
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	SLQPTECK	SLQPTEC(UniMod:4)K	2	SLQPTEC(UniMod:4)K2	26510.3	28773.7	19544.2
D3ZCK4	D3ZCK4	D3ZCK4_RAT	Def6	DEF6 guanine nucleotide exchange factor	1	SLQQAQQQLEEVR	SLQQAQQQLEEVR	2	SLQQAQQQLEEVR2	9468.76	8579.11	7777.59
D3ZCK4	D3ZCK4	D3ZCK4_RAT	Def6	DEF6 guanine nucleotide exchange factor	1	SLQQAQQQLEEVR	SLQQAQQQLEEVR	3	SLQQAQQQLEEVR3	9744.49	7123.31	
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	SLQQGPDSLR	SLQQGPDSLR	2	SLQQGPDSLR2	29552.3	15050.7	20888.3
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	SLQQGPDSLRK	SLQQGPDSLRK	3	SLQQGPDSLRK3	5341.1	4442.57	3652.41
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	SLQQLAEER	SLQQLAEER	2	SLQQLAEER2	675719	793444	718028
A0A8I5XVT7;A0A8I6AEK2	A0A8I5XVT7;A0A8I6AEK2	A0A8I5XVT7_RAT;A0A8I6AEK2_RAT	Fbxl18;RGD1565987	F-box and leucine-rich repeat protein 18	0	SLQQSLLR	SLQQSLLR	2	SLQQSLLR2	5462.4	6299.56	8660.76
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	SLQSDLEAEQVK	SLQSDLEAEQVK	2	SLQSDLEAEQVK2	127588	131664	152201
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	SLQSDLEAEQVK	SLQSDLEAEQVK	3	SLQSDLEAEQVK3	9773.32	8222.52	8208.84
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	SLQSLLGPSSK	SLQSLLGPSSK	2	SLQSLLGPSSK2	123015	121619	118564
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	SLQSQENMSPLASTR	SLQSQENMSPLASTR	2	SLQSQENMSPLASTR2	438702	418811	379132
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	SLQSQENMSPLASTR	SLQSQENMSPLASTR	3	SLQSQENMSPLASTR3	68791	87286.4	87444.9
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	SLQSQLQTK	SLQSQLQTK	2	SLQSQLQTK2	33232.4	31259	31003.5
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	SLQSTFQLR	SLQSTFQLR	2	SLQSTFQLR2	130415	124100	128988
P61314	P61314;A0A8I5ZY58;A0A8I6A471	RL15_RAT	Rpl15	Large ribosomal subunit protein eL15	0	SLQSVAEER	SLQSVAEER	2	SLQSVAEER2	55099	56507.3	51310.8
D3ZGE9	D3ZGE9	D3ZGE9_RAT	Rbm38	RNA binding motif protein 38	1	SLQTGFAVGVQQLHPTLIQR	SLQTGFAVGVQQLHPTLIQR	3	SLQTGFAVGVQQLHPTLIQR3	24365.5	30806.4	19538.7
Q5XIB4	Q5XIB4	UFSP2_RAT	Ufsp2	Ufm1-specific protease 2	1	SLQTVCSWFR	SLQTVC(UniMod:4)SWFR	2	SLQTVC(UniMod:4)SWFR2	7291.81		5341.3
A0A8I5YCC9	A0A8I5YCC9	A0A8I5YCC9_RAT	Itga5	Integrin subunit alpha 5	1	SLQWFGATVR	SLQWFGATVR	2	SLQWFGATVR2	30254.4	27423.4	25032.7
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	SLQYGEQVNEILSR	SLQYGEQVNEILSR	2	SLQYGEQVNEILSR2	7337.8	4932.7	10134.2
Q6AXV6	Q6AXV6	CBY2_RAT	Cby2	Protein chibby homolog 2	1	SLRDENR	SLRDENR	2	SLRDENR2			143681
P09456	P09456	KAP0_RAT	Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit	1	SLRECELYVQK	SLREC(UniMod:4)ELYVQK	3	SLREC(UniMod:4)ELYVQK3		10925.3	17047.5
D3ZQJ3	D3ZQJ3	D3ZQJ3_RAT	Gigyf1	GRB10 interacting GYF protein 1	1	SLREEQEDDSSWR	SLREEQEDDSSWR	3	SLREEQEDDSSWR3	3259.78	3728.14	3510.77
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SLRELLQIDGK	SLRELLQIDGK	3	SLRELLQIDGK3	2448.11	7630.72	3649.52
A0A8I6AFV7	A0A8I6AFV7	A0A8I6AFV7_RAT	LOC100912265	Cytochrome P450 2C26-like	1	SLRNFSK	SLRNFSK	1	SLRNFSK1	18468.1	28318.5	14769.8
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	SLSALGNVISALAEGSTYVPYR	SLSALGNVISALAEGSTYVPYR	3	SLSALGNVISALAEGSTYVPYR3	21516.2	31111.4	26118.6
A0A8I6G9F8	A0A8I6G9F8	A0A8I6G9F8_RAT	Wdr59	WD repeat domain 59	1	SLSALSAYHTGLIAPMK	SLSALSAYHTGLIAPMK	3	SLSALSAYHTGLIAPMK3	6392.42	10700.2	6526.74
O88831	O88831	KKCC2_RAT	Camkk2	Calcium/calmodulin-dependent protein kinase kinase 2	1	SLSAPGNLLTK	SLSAPGNLLTK	2	SLSAPGNLLTK2	11172.7	7759.2	6113.89
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	SLSAPHVCLCHQGELER	SLSAPHVC(UniMod:4)LC(UniMod:4)HQGELER	4	SLSAPHVC(UniMod:4)LC(UniMod:4)HQGELER4	7569.05	11671.2	8895.16
D3ZBX9	D3ZBX9	D3ZBX9_RAT	Ccdc92	Coiled-coil domain containing 92	1	SLSAPLHPEFEEVYR	SLSAPLHPEFEEVYR	3	SLSAPLHPEFEEVYR3	56553.6	58722.2	39680.3
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	SLSAQEEK	SLSAQEEK	1	SLSAQEEK1	11168		6634.66
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	SLSAQEEK	SLSAQEEK	2	SLSAQEEK2			325951
A0A8I6AFT7	A0A8I6AFT7	A0A8I6AFT7_RAT	Nadk	NAD(+) kinase	1	SLSASPALGSTK	SLSASPALGSTK	2	SLSASPALGSTK2	8148.39	11918.1	8683.87
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	SLSASSLFYK	SLSASSLFYK	2	SLSASSLFYK2	10975.6	11676.1	22152.8
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	SLSAVLSAELSK	SLSAVLSAELSK	2	SLSAVLSAELSK2	26548.4	15078.2	26196.7
D3ZZ26	D3ZZ26	D3ZZ26_RAT	Ppp1r3d	Protein phosphatase 1, regulatory subunit 3D	1	SLSCLSDMDGR	SLSC(UniMod:4)LSDMDGR	2	SLSC(UniMod:4)LSDMDGR2	370996	350543	310021
Q5M929	Q5M929	RN135_RAT	Rnf135	E3 ubiquitin-protein ligase RNF135	1	SLSCNLEVSNNCR	SLSC(UniMod:4)NLEVSNNC(UniMod:4)R	2	SLSC(UniMod:4)NLEVSNNC(UniMod:4)R2	2782.21	3110.25	5831.29
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	SLSDALISLQMVYPR	SLSDALISLQMVYPR	2	SLSDALISLQMVYPR2	108603	161785	132763
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	SLSDALISLQMVYPR	SLSDALISLQMVYPR	3	SLSDALISLQMVYPR3	42936.2	39783.5	45926.4
A0A8I6ANR6	A0A8I6ANR6	A0A8I6ANR6_RAT	Chuk	IkappaB kinase	1	SLSDCVNYIVQDSK	SLSDC(UniMod:4)VNYIVQDSK	2	SLSDC(UniMod:4)VNYIVQDSK2	2824.07	1919.15	1925.13
F1M8V2	F1M8V2	F1M8V2_RAT	Ube4b	Ubiquitin conjugation factor E4	1	SLSDKEPSSGPEVSEEQALQLVCK	SLSDKEPSSGPEVSEEQALQLVC(UniMod:4)K	3	SLSDKEPSSGPEVSEEQALQLVC(UniMod:4)K3	3582.53	2650.51	2409.13
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	SLSDLFR	SLSDLFR	2	SLSDLFR2	320887	308742	338038
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	SLSDNVNLPQGVR	SLSDNVNLPQGVR	2	SLSDNVNLPQGVR2	79746.7	87960.3	82574.8
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	SLSDTIEK	SLSDTIEK	2	SLSDTIEK2	316794	305903	339716
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	SLSDVSAEDVQSLR	SLSDVSAEDVQSLR	2	SLSDVSAEDVQSLR2	5841.73	1927.01	5955.23
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	SLSEAIEK	SLSEAIEK	2	SLSEAIEK2	44014.2	71068.1	52998
Q9QYM0	Q9QYM0	MRP5_RAT	Abcc5	ATP-binding cassette sub-family C member 5	1	SLSEASVAVDR	SLSEASVAVDR	2	SLSEASVAVDR2	3878.62	3994.83	
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	SLSEDSGEEMDSVDPVTLYSYK	SLSEDSGEEMDSVDPVTLYSYK	3	SLSEDSGEEMDSVDPVTLYSYK3	31171.1	39756.9	44554.6
Q0Z843	Q0Z843	Q0Z843_RAT	Fig4	FIG4 phosphoinositide 5-phosphatase	1	SLSEEDHSIYAR	SLSEEDHSIYAR	3	SLSEEDHSIYAR3	17951.7	24406	15772.3
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	SLSEGYPTAQHEK	SLSEGYPTAQHEK	2	SLSEGYPTAQHEK2	12265.8	9042.18	14252.7
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	SLSEGYPTAQHEK	SLSEGYPTAQHEK	3	SLSEGYPTAQHEK3	37022.4	47338.6	46632.1
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	SLSELESLK	SLSELESLK	2	SLSELESLK2	49339.1	61452.4	57700.7
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	SLSELESLKLPAESNEK	SLSELESLKLPAESNEK	2	SLSELESLKLPAESNEK2	1510.59	1999.01	5285.84
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	SLSELESLKLPAESNEK	SLSELESLKLPAESNEK	3	SLSELESLKLPAESNEK3	121121	171844	155171
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	SLSELLGPYGMK	SLSELLGPYGMK	2	SLSELLGPYGMK2	181500	192994	192131
Q5FVM3	Q5FVM3	RETR1_RAT	Retreg1	Reticulophagy regulator 1	1	SLSESWEVINSKPDERPR	SLSESWEVINSKPDERPR	3	SLSESWEVINSKPDERPR3	10621.1	10226.5	6590.82
Q5FVM3	Q5FVM3	RETR1_RAT	Retreg1	Reticulophagy regulator 1	1	SLSESWEVINSKPDERPR	SLSESWEVINSKPDERPR	4	SLSESWEVINSKPDERPR4	66154.3	54466.4	77664.7
F7EMK2	F7EMK2	F7EMK2_RAT	Dpagt1	UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase	1	SLSFLGTFILK	SLSFLGTFILK	2	SLSFLGTFILK2	6053.96	7697.92	5696.37
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	SLSFQEALR	SLSFQEALR	2	SLSFQEALR2	56480.7	47237.9	50313.1
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	SLSFQEALRT	SLSFQEALRT	2	SLSFQEALRT2	11031	10872.2	
Q5PQQ8	Q5PQQ8	ITGBL_RAT	Itgbl1	Integrin beta-like protein 1	1	SLSGAPCR	SLSGAPC(UniMod:4)R	2	SLSGAPC(UniMod:4)R2	76180.1	63108.5	76952.6
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	SLSGGASYVDFLCHMHK	SLSGGASYVDFLC(UniMod:4)HMHK	3	SLSGGASYVDFLC(UniMod:4)HMHK3	6590.36	9829.56	
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	SLSGGASYVDFLCHMHK	SLSGGASYVDFLC(UniMod:4)HMHK	4	SLSGGASYVDFLC(UniMod:4)HMHK4	14867.3	9079.57	10223.2
F1LQP9	F1LQP9;D3ZER6	F1LQP9_RAT	Tnpo1	Transportin 1	0	SLSGLILK	SLSGLILK	2	SLSGLILK2	306873	299573	313403
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	SLSGSGEVLGAVR	SLSGSGEVLGAVR	2	SLSGSGEVLGAVR2	10598	9607.89	6539.21
A0A8I6AD67	A0A8I6AD67	A0A8I6AD67_RAT	Parp9	Poly [ADP-ribose] polymerase	1	SLSGWGTDQQGK	SLSGWGTDQQGK	2	SLSGWGTDQQGK2	2687.3	5542.16	3584.83
F1LU27	F1LU27	F1LU27_RAT	Focad	Focadhesin	1	SLSHFSAGEHTILHLPEK	SLSHFSAGEHTILHLPEK	4	SLSHFSAGEHTILHLPEK4	6807.14		
D3ZYT8	D3ZYT8	D3ZYT8_RAT	Pikfyve	1-phosphatidylinositol-3-phosphate 5-kinase	1	SLSHSSPWQAR	SLSHSSPWQAR	3	SLSHSSPWQAR3	16928.9	12314.3	6684.01
Q62896	Q62896	BET1_RAT	Bet1	BET1 homolog	1	SLSIEIGHEVK	SLSIEIGHEVK	2	SLSIEIGHEVK2	17120.1	18049.4	7138
Q62896	Q62896	BET1_RAT	Bet1	BET1 homolog	1	SLSIEIGHEVK	SLSIEIGHEVK	3	SLSIEIGHEVK3	132185	126515	123021
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	SLSLAQSSHAVAAMPCGDR	SLSLAQSSHAVAAMPC(UniMod:4)GDR	3	SLSLAQSSHAVAAMPC(UniMod:4)GDR3	8809.44	2290.14	
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	SLSLCNMFLDEMAK	SLSLC(UniMod:4)NMFLDEMAK	2	SLSLC(UniMod:4)NMFLDEMAK2	89019.7	124363	113704
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	SLSLCNMFLDEMAK	SLSLC(UniMod:4)NMFLDEMAK	3	SLSLC(UniMod:4)NMFLDEMAK3	23847.3	10941.2	10385.3
Q6R6I6	Q6R6I6	RXFP1_RAT	Rxfp1	Relaxin receptor 1	1	SLSLEGIEISNIQQR	SLSLEGIEISNIQQR	2	SLSLEGIEISNIQQR2	1009.91		
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	SLSLESTDR	SLSLESTDR	2	SLSLESTDR2	17093.8	9677.43	16694.6
Q66HF2	Q66HF2	TM9S1_RAT	Tm9sf1	Transmembrane 9 superfamily member 1	1	SLSLGEVLDGDR	SLSLGEVLDGDR	2	SLSLGEVLDGDR2	17176.4	19384.3	13905
B0BNF1	B0BNF1	SEPT8_RAT	Septin8	Septin-8	1	SLSLGGHVGFDSLPDQLVSK	SLSLGGHVGFDSLPDQLVSK	3	SLSLGGHVGFDSLPDQLVSK3	2900.72	4594.49	3589.84
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	SLSLILYSR	SLSLILYSR	2	SLSLILYSR2	86728.5	68105.5	1.74327e+06
Q5FVI3	A0A8I6AP35;Q5FVI3	LRC57_RAT	Lrrc57	Leucine-rich repeat-containing protein 57	0	SLSLNNNK	SLSLNNNK	2	SLSLNNNK2	23306.7	18803.9	13062.5
A0A8I5ZW56	A0A8I5ZW56	A0A8I5ZW56_RAT	Clec16a	C-type lectin domain containing 16A	1	SLSLQLR	SLSLQLR	2	SLSLQLR2	9745.21	11760.6	15297.9
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	SLSLQQQQDGDNGDSSK	SLSLQQQQDGDNGDSSK	2	SLSLQQQQDGDNGDSSK2	2084.58	5443.67	2912.82
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	SLSNGDFR	SLSNGDFR	2	SLSNGDFR2	1.11288e+06	871633	826990
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	SLSNTEDECTHLR	SLSNTEDEC(UniMod:4)THLR	2	SLSNTEDEC(UniMod:4)THLR2	23973.4	20137.5	20342.6
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	SLSNTEDECTHLR	SLSNTEDEC(UniMod:4)THLR	3	SLSNTEDEC(UniMod:4)THLR3	42334	26930.8	46613
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	SLSNVGDPEIIK	SLSNVGDPEIIK	2	SLSNVGDPEIIK2	55342.2	56723.8	63511.6
A0A8I6A4U0	P20767;A0A8I6A4U0;A0A8I5ZZL6	A0A8I6A4U0_RAT	ENSRNOG00000064589	Ig-like domain-containing protein	0	SLSPAECV	SLSPAEC(UniMod:4)V	1	SLSPAEC(UniMod:4)V1	1.67466e+06	1.3926e+06	1.45356e+06
A0A8I6A4U0	P20767;A0A8I6A4U0;A0A8I5ZZL6	A0A8I6A4U0_RAT	ENSRNOG00000064589	Ig-like domain-containing protein	0	SLSPAECV	SLSPAEC(UniMod:4)V	2	SLSPAEC(UniMod:4)V2	537045	466450	501068
F1M7Q7	F1M7Q7	F1M7Q7_RAT	Otud4	ubiquitinyl hydrolase 1	1	SLSPAVYR	SLSPAVYR	2	SLSPAVYR2	17528.1	19758.4	10367.1
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	SLSPNHNTLQTLK	SLSPNHNTLQTLK	3	SLSPNHNTLQTLK3	1825.01	2893.73	2220.62
P35704	P35704	PRDX2_RAT	Prdx2	Peroxiredoxin-2	1	SLSQNYGVLK	SLSQNYGVLK	2	SLSQNYGVLK2	80794.3	79911.3	70811.2
P02454	P02454	CO1A1_RAT	Col1a1	Collagen alpha-1(I) chain	1	SLSQQIENIR	SLSQQIENIR	2	SLSQQIENIR2	9637.6	11654.3	7804.69
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	SLSQSASVAEVLR	SLSQSASVAEVLR	2	SLSQSASVAEVLR2	22226.8	16673.6	18108.1
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	SLSREDMESVLDK	SLSREDMESVLDK	3	SLSREDMESVLDK3	27359.5	16236.5	25678.7
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SLSSEMYVK	SLSSEMYVK	2	SLSSEMYVK2	5.92447e+06	7.04619e+06	7.32501e+06
Q6AY97	Q6AY97	CCD91_RAT	Ccdc91	Coiled-coil domain-containing protein 91	1	SLSSLELFLSCAQK	SLSSLELFLSC(UniMod:4)AQK	2	SLSSLELFLSC(UniMod:4)AQK2	5254.6	8316.29	7852.37
Q9Z272	Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	1	SLSSPTDNLELSAR	SLSSPTDNLELSAR	2	SLSSPTDNLELSAR2	23291.6	18509.9	28788.1
F1LQ00	F1LQ00	F1LQ00_RAT	Col5a2	Collagen type V alpha 2 chain	1	SLSSQIETMR	SLSSQIETMR	2	SLSSQIETMR2	26096.1	23293.9	29770.2
A0A8I6GH80	A0A8I6GH80	A0A8I6GH80_RAT	Vps4b	vesicle-fusing ATPase	1	SLSSTKPTVNEQDLLK	SLSSTKPTVNEQDLLK	3	SLSSTKPTVNEQDLLK3	46557.6	37960.7	35668.4
P60905	P60905	DNJC5_RAT	Dnajc5	DnaJ homolog subfamily C member 5	1	SLSTSGESLYHVLGLDK	SLSTSGESLYHVLGLDK	2	SLSTSGESLYHVLGLDK2	3522.23	1006.78	4407.29
P60905	P60905	DNJC5_RAT	Dnajc5	DnaJ homolog subfamily C member 5	1	SLSTSGESLYHVLGLDK	SLSTSGESLYHVLGLDK	3	SLSTSGESLYHVLGLDK3		4980.83	7358.88
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	SLSTTNVFACSDRPTVIYSSNHK	SLSTTNVFAC(UniMod:4)SDRPTVIYSSNHK	3	SLSTTNVFAC(UniMod:4)SDRPTVIYSSNHK3	5076.33	4881.64	2510.24
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	SLSTTNVFACSDRPTVIYSSNHK	SLSTTNVFAC(UniMod:4)SDRPTVIYSSNHK	4	SLSTTNVFAC(UniMod:4)SDRPTVIYSSNHK4	51629.8	33889.2	41477.2
D4A3S0	D4A3S0	D4A3S0_RAT	Trappc6a	Trafficking protein particle complex subunit 6A	1	SLSVLEGLGFR	SLSVLEGLGFR	2	SLSVLEGLGFR2	6868.93	21719	10789.6
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	SLSVLSPR	SLSVLSPR	2	SLSVLSPR2	175062	171649	168873
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	SLSVPAAGTAKPPTLPR	SLSVPAAGTAKPPTLPR	3	SLSVPAAGTAKPPTLPR3	33743.6	35190.9	22512.7
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	SLSVSLSEDGGGGK	SLSVSLSEDGGGGK	2	SLSVSLSEDGGGGK2	9380.14	9319.22	9462.9
D4A1A5	A0A8I6A6K6;D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	0	SLSVYHPQLAYCVVQFLEK	SLSVYHPQLAYC(UniMod:4)VVQFLEK	3	SLSVYHPQLAYC(UniMod:4)VVQFLEK3	24194	28663.3	25967.7
P70496	P70496	PLD1_RAT	Pld1	Phospholipase D1	1	SLSYPFLLPK	SLSYPFLLPK	2	SLSYPFLLPK2	3374.59	2953.47	6865.5
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	SLTAEIDR	SLTAEIDR	2	SLTAEIDR2	126510	103200	109539
P18292	P18292	THRB_RAT	F2	Prothrombin	1	SLTDKTEK	SLTDKTEK	1	SLTDKTEK1			15037.2
P18292	P18292	THRB_RAT	F2	Prothrombin	1	SLTDKTEK	SLTDKTEK	2	SLTDKTEK2			193117
P18292	P18292	THRB_RAT	F2	Prothrombin	1	SLTDKTEKELLDSYIDGR	SLTDKTEKELLDSYIDGR	3	SLTDKTEKELLDSYIDGR3	37710.7	50998.9	63266
P18292	P18292	THRB_RAT	F2	Prothrombin	1	SLTDKTEKELLDSYIDGR	SLTDKTEKELLDSYIDGR	4	SLTDKTEKELLDSYIDGR4	132003	212498	209509
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	SLTELQELEAVYER	SLTELQELEAVYER	2	SLTELQELEAVYER2	14480.7	13716.5	15663
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	SLTELQELEAVYER	SLTELQELEAVYER	3	SLTELQELEAVYER3	8327.96		5070.69
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	SLTESLESILSR	SLTESLESILSR	2	SLTESLESILSR2	40312	13265.1	18748.6
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	SLTEYLQNVEQK	SLTEYLQNVEQK	2	SLTEYLQNVEQK2	89768.1	81836.4	74766.9
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	SLTEYLQNVEQK	SLTEYLQNVEQK	3	SLTEYLQNVEQK3	12297	13100.2	12809.8
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	SLTEYLQNVEQKK	SLTEYLQNVEQKK	3	SLTEYLQNVEQKK3	8239.07	13436.4	13868.4
Q9R1R4	Q9R1R4	TDRD7_RAT	Tdrd7	Tudor domain-containing protein 7	1	SLTGDWIPFK	SLTGDWIPFK	2	SLTGDWIPFK2			4327.39
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	SLTGIEYKPVSATGAEDKDK	SLTGIEYKPVSATGAEDKDK	3	SLTGIEYKPVSATGAEDKDK3	11112.5	8368.87	16392.9
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	SLTGIEYKPVSATGAEDKDK	SLTGIEYKPVSATGAEDKDK	4	SLTGIEYKPVSATGAEDKDK4	20883.9	20845	28747.2
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	SLTGLLSSFVEVESIK	SLTGLLSSFVEVESIK	2	SLTGLLSSFVEVESIK2	4396.96	7178.77	2249.71
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	SLTGLLSSFVEVESIKR	SLTGLLSSFVEVESIKR	3	SLTGLLSSFVEVESIKR3	25033.8	42600.1	26906.7
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	SLTGSAPPLTEK	SLTGSAPPLTEK	2	SLTGSAPPLTEK2	187081	181172	193854
Q1RP74	Q1RP74	Q1RP74_RAT	Tbcb	Tubulin folding cofactor B	1	SLTIAEFK	SLTIAEFK	2	SLTIAEFK2	280048	207714	220854
D3ZXB1	D3ZXB1	D3ZXB1_RAT	Map4k2	Mitogen-activated protein kinase kinase kinase kinase 2	1	SLTIRPAIELQELDSPDDAIGTIK	SLTIRPAIELQELDSPDDAIGTIK	3	SLTIRPAIELQELDSPDDAIGTIK3	6790.53	6337.57	6450.75
Q5FVC7	Q5FVC7	ACAP2_RAT	Acap2	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2	1	SLTLDTWEPELLK	SLTLDTWEPELLK	2	SLTLDTWEPELLK2	10493.4	10871.8	13110.9
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	SLTLDVK	SLTLDVK	2	SLTLDVK2	79078.3	75441.5	74361.9
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	SLTLQLEQESNKR	SLTLQLEQESNKR	3	SLTLQLEQESNKR3	19600.1	17772.5	29105.4
Q4KLN3	Q4KLN3	Q4KLN3_RAT	Srpk1	SRSF protein kinase 1	1	SLTLTQQDITHLQER	SLTLTQQDITHLQER	3	SLTLTQQDITHLQER3	13596.9	22206.4	26377.5
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	SLTMDPHK	SLTMDPHK	2	SLTMDPHK2	12794.9	15482.5	13420.2
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	SLTMDPHKLPSSSEQVILDLK	SLTMDPHKLPSSSEQVILDLK	3	SLTMDPHKLPSSSEQVILDLK3	18678.8	14864.3	9449.08
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	SLTMDPHKLPSSSEQVILDLK	SLTMDPHKLPSSSEQVILDLK	4	SLTMDPHKLPSSSEQVILDLK4	54430.4	60640.4	51058
D3ZFJ6	D3ZFJ6	D3ZFJ6_RAT	Lactb	Lactamase, beta	1	SLTMVALAK	SLTMVALAK	2	SLTMVALAK2	18765.4	21780.2	22613.9
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	SLTMVEDNDDEEEDGDELLHHHR	SLTMVEDNDDEEEDGDELLHHHR	4	SLTMVEDNDDEEEDGDELLHHHR4	3345.88	2957.51	
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	SLTNDWEDHLAVK	SLTNDWEDHLAVK	2	SLTNDWEDHLAVK2	38912	75280.3	58754.8
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	SLTNDWEDHLAVK	SLTNDWEDHLAVK	3	SLTNDWEDHLAVK3	921613	1.34771e+06	1.06117e+06
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	SLTNDWEEHLAVK	SLTNDWEEHLAVK	2	SLTNDWEEHLAVK2	71186.3	77573.9	64816.4
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	SLTNDWEEHLAVK	SLTNDWEEHLAVK	3	SLTNDWEEHLAVK3	811193	971153	974460
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	SLTNTFGDDK	SLTNTFGDDK	2	SLTNTFGDDK2	33170.2	45642	39693.4
A0A096MK24	A0A096MK24	A0A096MK24_RAT	Morc4	Microrchidia 4	1	SLTNVEYDTYKPTSTNK	SLTNVEYDTYKPTSTNK	3	SLTNVEYDTYKPTSTNK3	7763	4621.72	6896.02
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	SLTPEEGQR	SLTPEEGQR	2	SLTPEEGQR2	65581.5	68025	70696.4
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	SLTPNHQK	SLTPNHQK	1	SLTPNHQK1			15981.3
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	SLTPNHQK	SLTPNHQK	2	SLTPNHQK2			992834
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	SLTPTLPMESTLNK	SLTPTLPMESTLNK	2	SLTPTLPMESTLNK2	90632.8	92227.8	75669.1
D3ZF92	D3ZF92	TNR21_RAT	Tnfrsf21	Tumor necrosis factor receptor superfamily member 21	1	SLTPTQNR	SLTPTQNR	2	SLTPTQNR2	5404.55	9167.99	7687.16
A0A0G2JST1	A0A0G2JST1	A0A0G2JST1_RAT	Adgrg6	Adhesion G protein-coupled receptor G6	1	SLTQLLSLEK	SLTQLLSLEK	2	SLTQLLSLEK2	4113.17	11112.5	4565.68
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	SLTSCSSDLTLR	SLTSC(UniMod:4)SSDLTLR	2	SLTSC(UniMod:4)SSDLTLR2	990.533		2347.57
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	SLTSFEEAQGSGMSSK	SLTSFEEAQGSGMSSK	2	SLTSFEEAQGSGMSSK2	13329.4	9485.25	10494.5
D3ZFJ3	D3ZFJ3	3BP1_RAT	Sh3bp1	SH3 domain-binding protein 1	1	SLTSLDTALAELR	SLTSLDTALAELR	2	SLTSLDTALAELR2	18391.1	11629.1	14801.7
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	SLTSPAAK	SLTSPAAK	2	SLTSPAAK2	80034.2	80874.5	54271.5
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	SLTSPSNPGTR	SLTSPSNPGTR	2	SLTSPSNPGTR2	5394.54	6298.83	7804.57
D3ZGN0	D3ZGN0	D3ZGN0_RAT	Tbc1d4	TBC1 domain family, member 4	1	SLTSSLENIFSR	SLTSSLENIFSR	2	SLTSSLENIFSR2	2705.32	2716.68	1323.46
Q99P74	P23640;Q99P74	RB27B_RAT	Rab27b	Ras-related protein Rab-27B	0	SLTTAFFR	SLTTAFFR	2	SLTTAFFR2	1.54366e+06	1.37652e+06	1.47207e+06
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	SLTTHSISNVQQSR	SLTTHSISNVQQSR	2	SLTTHSISNVQQSR2	4838.9	5716.23	1923.81
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	SLTTHSISNVQQSR	SLTTHSISNVQQSR	3	SLTTHSISNVQQSR3	36545.6	37090.3	35249.6
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	SLTTIMELQQR	SLTTIMELQQR	2	SLTTIMELQQR2	40784	34805.4	35511.4
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	SLTTLGLVISALADQGAGK	SLTTLGLVISALADQGAGK	3	SLTTLGLVISALADQGAGK3	7383.59	6689.64	6262.83
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	SLTTSQYLMHEVAK	SLTTSQYLMHEVAK	2	SLTTSQYLMHEVAK2	3541.28	4583.16	6147.08
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	SLTTSQYLMHEVAK	SLTTSQYLMHEVAK	3	SLTTSQYLMHEVAK3	85308.4	89113.1	94577.9
Q9Z1Z1	Q9Z1Z1	E2AK3_RAT	Eif2ak3	Eukaryotic translation initiation factor 2-alpha kinase 3	1	SLTTYGLSAYSGK	SLTTYGLSAYSGK	2	SLTTYGLSAYSGK2		3877.15	2331.07
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	SLTYDEVISFVPPPLDQEEMES	SLTYDEVISFVPPPLDQEEMES	3	SLTYDEVISFVPPPLDQEEMES3	7913.4	7872.04	5783.78
B2RYG8	B2RYG8	ELP6_RAT	Elp6	Elongator complex protein 6	1	SLTYQYK	SLTYQYK	2	SLTYQYK2	16474.9	18152.5	19135.3
A0A0G2JVY4	A0A0G2JVY4	A0A0G2JVY4_RAT	Tmem63a	Transmembrane protein 63a	1	SLTYYTNLQVK	SLTYYTNLQVK	2	SLTYYTNLQVK2	3997.42	6947.01	4979.62
Q64640	Q64640	ADK_RAT	Adk	Adenosine kinase	1	SLVANLAAANCYK	SLVANLAAANC(UniMod:4)YK	2	SLVANLAAANC(UniMod:4)YK2	16816.2	10643.1	13450.8
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	SLVANTLPLLQTR	SLVANTLPLLQTR	2	SLVANTLPLLQTR2	13527.8	11122.2	7724.23
A0A8J8Y8E0	A0A8J8Y8E0	A0A8J8Y8E0_RAT	Fibp	FGF1 intracellular binding protein	1	SLVCTALR	SLVC(UniMod:4)TALR	2	SLVC(UniMod:4)TALR2	18306.6	15094.9	9492.48
F1LRA7	F1LRA7	F1LRA7_RAT	Map3k9	Mitogen-activated protein kinase kinase kinase	1	SLVDGYK	SLVDGYK	1	SLVDGYK1	549994		
F1LRA7	F1LRA7	F1LRA7_RAT	Map3k9	Mitogen-activated protein kinase kinase kinase	1	SLVDGYK	SLVDGYK	2	SLVDGYK2	1.86771e+07	1.8818e+07	1.93695e+07
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	SLVDIDLSSLR	SLVDIDLSSLR	2	SLVDIDLSSLR2	3168.92	3460.92	
D3Z8D3	D3Z8D3	D3Z8D3_RAT	Borcs8	BLOC-1 related complex subunit 8	1	SLVDSSVYFR	SLVDSSVYFR	2	SLVDSSVYFR2	27934.8	26755.1	16806.8
A0A0G2K6U7	A0A0G2K6U7	A0A0G2K6U7_RAT	Nfkbiz	NFKB inhibitor zeta	1	SLVDTIK	SLVDTIK	1	SLVDTIK1	52057	52790.1	33001.7
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SLVDTLK	SLVDTLK	2	SLVDTLK2	3.92401e+06	4.84848e+06	4.65934e+06
O55043	O55043;Q5XXR3	ARHG7_RAT	Arhgef7	Rho guanine nucleotide exchange factor 7	0	SLVDTVYALK	SLVDTVYALK	2	SLVDTVYALK2	8587.58	9537.75	18772.5
Q5XXR3	Q5XXR3	ARHG6_RAT	Arhgef6	Rho guanine nucleotide exchange factor 6	1	SLVDTVYALKDEVK	SLVDTVYALKDEVK	3	SLVDTVYALKDEVK3	19454.7	15649.9	11319.7
A0A8I5ZS69	A0A8I5ZS69	A0A8I5ZS69_RAT	Snx6	Sorting nexin	1	SLVDYENANK	SLVDYENANK	2	SLVDYENANK2	112087	86974.5	119781
O08775	O08775	VGFR2_RAT	Kdr	Vascular endothelial growth factor receptor 2	1	SLVEATVGSQVR	SLVEATVGSQVR	2	SLVEATVGSQVR2	53450	51230.7	47280.2
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	SLVEIADTVPK	SLVEIADTVPK	2	SLVEIADTVPK2	182576	184260	182792
Q63515	Q63515	C4BPB_RAT	C4bpb	C4b-binding protein beta chain	1	SLVFDPSK	SLVFDPSK	1	SLVFDPSK1	80729.4	72928.5	72748.4
Q63515	Q63515	C4BPB_RAT	C4bpb	C4b-binding protein beta chain	1	SLVFDPSK	SLVFDPSK	2	SLVFDPSK2	5.1934e+06	5.20659e+06	5.53913e+06
B1H282	B1H282	B1H282_RAT	Colgalt1	Collagen beta(1-O)galactosyltransferase 1	1	SLVFEDDLR	SLVFEDDLR	2	SLVFEDDLR2	9262.43	2958.28	3587.82
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	SLVGLSQER	SLVGLSQER	2	SLVGLSQER2	33823.7	42563	25480.3
Q9Z1Z1	Q9Z1Z1	E2AK3_RAT	Eif2ak3	Eukaryotic translation initiation factor 2-alpha kinase 3	1	SLVIISTLDGR	SLVIISTLDGR	2	SLVIISTLDGR2	21166.8	17242.2	14941.5
A0A8I5ZN24	A0A8I5ZN24	A0A8I5ZN24_RAT	Dhrs7	Dehydrogenase/reductase 7	1	SLVLETNLEVFK	SLVLETNLEVFK	2	SLVLETNLEVFK2	14866.6	9866.02	11175.6
F7FI79	F7FI79	F7FI79_RAT	Fhip2b	FHF complex subunit HOOK interacting protein 2B	1	SLVLQNLEGR	SLVLQNLEGR	2	SLVLQNLEGR2	23347.9	28006.1	18609.1
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	SLVLQTDPLPPAR	SLVLQTDPLPPAR	2	SLVLQTDPLPPAR2	17241.6	12303.6	8953.78
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	SLVLTALQK	SLVLTALQK	2	SLVLTALQK2	32050.5	43233.7	29660.2
Q62651	Q62651	ECH1_RAT	Ech1	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial	1	SLVNELTFTAR	SLVNELTFTAR	2	SLVNELTFTAR2	39013	40741.8	23142.4
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	SLVPGGIAEK	SLVPGGIAEK	2	SLVPGGIAEK2	18885.5	11304.8	28569.5
Q32KJ6	Q32KJ6	GALNS_RAT	Galns	N-acetylgalactosamine-6-sulfatase	1	SLVPGQPQLNVCNQAVMNWAPPGCEK	SLVPGQPQLNVC(UniMod:4)NQAVMNWAPPGC(UniMod:4)EK	3	SLVPGQPQLNVC(UniMod:4)NQAVMNWAPPGC(UniMod:4)EK3	25927.8	26899.3	26713.3
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	SLVPQMPK	SLVPQMPK	2	SLVPQMPK2	22470.6	23029.5	20545.3
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	SLVQANPEVAMDSIVHMTQHISPTQR	SLVQANPEVAMDSIVHMTQHISPTQR	3	SLVQANPEVAMDSIVHMTQHISPTQR3	2976.48	13246	
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	SLVQANPEVAMDSIVHMTQHISPTQR	SLVQANPEVAMDSIVHMTQHISPTQR	4	SLVQANPEVAMDSIVHMTQHISPTQR4	10787.8	11737.5	17054.2
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	SLVQGELVTASK	SLVQGELVTASK	2	SLVQGELVTASK2	242641	269377	270186
B2GV55	B2GV55	B2GV55_RAT	Ube2q1	Ubiquitin conjugating enzyme E2 Q1	1	SLVQIHEK	SLVQIHEK	2	SLVQIHEK2	9793.13	9190.13	10931.7
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	SLVSMGNDSEEK	SLVSMGNDSEEK	2	SLVSMGNDSEEK2	11734.4	11106.2	23265.1
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	SLVSMGNDSEEKR	SLVSMGNDSEEKR	3	SLVSMGNDSEEKR3	6915.94	15081.6	10789.7
Q5M849	Q5M849	Q5M849_RAT	Ifi35	Interferon-induced protein 35	1	SLVSNLK	SLVSNLK	2	SLVSNLK2	84515.6	68219.1	66363
A0A8I5ZUT2	A0A8I5ZUT2	A0A8I5ZUT2_RAT	Irgq	Immunity-related GTPase Q	1	SLVSPDAPLVGVR	SLVSPDAPLVGVR	2	SLVSPDAPLVGVR2	14407.5	18590.7	10597.2
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	SLVSVEEPIAFGGK	SLVSVEEPIAFGGK	2	SLVSVEEPIAFGGK2	2495.14	2024.42	2354.55
P34058	A0A8I6GLF3;P34058;A0A8I5ZYT7	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	SLVSVTK	SLVSVTK	1	SLVSVTK1	25838.5	27169.9	31019.3
Q9ES02	Q9ES02	MEPE_RAT	Mepe	Matrix extracellular phosphoglycoprotein	1	SLVTGTEVQSDR	SLVTGTEVQSDR	2	SLVTGTEVQSDR2	13885.1	11607.3	6032.43
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	SLVTHYCELVGANPK	SLVTHYC(UniMod:4)ELVGANPK	2	SLVTHYC(UniMod:4)ELVGANPK2	1289.51	2415.14	2043.83
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	SLVTHYCELVGANPK	SLVTHYC(UniMod:4)ELVGANPK	3	SLVTHYC(UniMod:4)ELVGANPK3	23405.7	27191.3	22875.5
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	SLVTNMDK	SLVTNMDK	2	SLVTNMDK2	54334	85773.4	72044.9
Q9JK72	Q9JK72	CCS_RAT	Ccs	Copper chaperone for superoxide dismutase	1	SLVVDEGEDDLGR	SLVVDEGEDDLGR	2	SLVVDEGEDDLGR2	86405.3	91094.3	81812.7
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	SLVVSPHEDMR	SLVVSPHEDMR	3	SLVVSPHEDMR3	9478.21		19555
Q09326	Q09326	MGAT2_RAT	Mgat2	Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	1	SLVYQLNFDQMLR	SLVYQLNFDQMLR	2	SLVYQLNFDQMLR2	7079.49	14365.1	12386.4
B1WC43	B1WC43	B1WC43_RAT	Tmem41a	Transmembrane protein 41a	1	SLWFPSDLAELR	SLWFPSDLAELR	2	SLWFPSDLAELR2	14227.8	19749.1	24116.8
P82471	P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	1	SLWNDPGIQECYDR	SLWNDPGIQEC(UniMod:4)YDR	2	SLWNDPGIQEC(UniMod:4)YDR2	324311	340443	395358
P82471	P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	1	SLWNDPGIQECYDR	SLWNDPGIQEC(UniMod:4)YDR	3	SLWNDPGIQEC(UniMod:4)YDR3	20117.6	26793.4	35637.5
P82471	P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	1	SLWNDPGIQECYDRR	SLWNDPGIQEC(UniMod:4)YDRR	3	SLWNDPGIQEC(UniMod:4)YDRR3	23781.8	33701.6	31148.5
G3V784	G3V784	G3V784_RAT	Adpgk	ADP-dependent glucokinase	1	SLWSSLR	SLWSSLR	2	SLWSSLR2	50823.7	43546	50878.9
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	SLYDLYTR	SLYDLYTR	2	SLYDLYTR2	33341.8	40430.9	40996.3
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	SLYEASLLLPTYK	SLYEASLLLPTYK	2	SLYEASLLLPTYK2	74830	74927.1	72691.9
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	SLYEASLLLPTYK	SLYEASLLLPTYK	3	SLYEASLLLPTYK3	6931.39	4951.53	10117.7
D3ZZL9	D3ZZL9	GCC2_RAT	Gcc2	GRIP and coiled-coil domain-containing protein 2	1	SLYEENNR	SLYEENNR	2	SLYEENNR2	4459.53	4948.38	
M0RAK0	M0RAK0	M0RAK0_RAT	Proser2	Proline and serine rich 2	1	SLYEPRPDGSQDAR	SLYEPRPDGSQDAR	3	SLYEPRPDGSQDAR3	87842.6	79006.2	91598.1
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	SLYFDEQESEACEK	SLYFDEQESEAC(UniMod:4)EK	2	SLYFDEQESEAC(UniMod:4)EK2	13030.9	14092.3	17382.8
P58751	P58751	RELN_RAT	Reln	Reelin	1	SLYFNGLGK	SLYFNGLGK	2	SLYFNGLGK2	180120	142641	160087
Q02527	Q02527	MGAT3_RAT	Mgat3	Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase	1	SLYGFFWK	SLYGFFWK	2	SLYGFFWK2	4231.02	8596.34	5952.33
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	SLYHDITGDTSGDYR	SLYHDITGDTSGDYR	2	SLYHDITGDTSGDYR2	2345.97	5429.27	3064.39
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	SLYHDITGDTSGDYR	SLYHDITGDTSGDYR	3	SLYHDITGDTSGDYR3	23213.4	19374.9	24428.5
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	SLYHDITGDTSGDYRK	SLYHDITGDTSGDYRK	3	SLYHDITGDTSGDYRK3	16265.6	12319.5	19086.4
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	SLYHDITGDTSGDYRK	SLYHDITGDTSGDYRK	4	SLYHDITGDTSGDYRK4	26683.9	27944.1	38333.4
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	SLYKPQASSAEVEMNAYVILAR	SLYKPQASSAEVEMNAYVILAR	3	SLYKPQASSAEVEMNAYVILAR3	69713.8	52492.5	70339
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	SLYLLINSK	SLYLLINSK	2	SLYLLINSK2	4069.45	6065.07	9168.02
D4A8B0	D4A8B0	D4A8B0_RAT	Sec14l5	SEC14-like lipid binding 5	1	SLYLTEEEQEQADQLR	SLYLTEEEQEQADQLR	3	SLYLTEEEQEQADQLR3	3566.3	2671.34	10371.5
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	SLYPGYK	SLYPGYK	2	SLYPGYK2	60802.5	46498.5	55599.2
D3ZUM4	D3ZUM4	D3ZUM4_RAT	Glb1	Beta-galactosidase	1	SLYPLTFTQVK	SLYPLTFTQVK	2	SLYPLTFTQVK2	30834	41732.2	40913.3
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	SLYQPGGVAPESLEYIEAHGTGTK	SLYQPGGVAPESLEYIEAHGTGTK	3	SLYQPGGVAPESLEYIEAHGTGTK3	66179.4	73635.5	66685.3
M0R5F1	M0R5F1	M0R5F1_RAT	Aspn	Asporin	1	SLYSAISLFNNPMK	SLYSAISLFNNPMK	2	SLYSAISLFNNPMK2	90155.5	90290.2	82539.6
M0R5F1	M0R5F1	M0R5F1_RAT	Aspn	Asporin	1	SLYSAISLFNNPMK	SLYSAISLFNNPMK	3	SLYSAISLFNNPMK3	9181.63	4148.54	10378.7
P55260	P55260	ANXA4_RAT	Anxa4	Annexin A4	1	SLYSFIK	SLYSFIK	2	SLYSFIK2	12332.6	13600.4	14626.7
D3Z8F6	D3Z8F6	D3Z8F6_RAT	Dennd1b	DENN domain containing 1B	1	SLYSHPVPK	SLYSHPVPK	2	SLYSHPVPK2	547.046	3012.43	
Q5M9G9	Q5M9G9	FAKD4_RAT	Tbrg4	FAST kinase domain-containing protein 4	1	SLYTLVLPQGSK	SLYTLVLPQGSK	2	SLYTLVLPQGSK2	10406.8	9611.33	6380.27
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	SLYTSMARPPLPR	SLYTSMARPPLPR	3	SLYTSMARPPLPR3	104569	100304	117785
D3ZD73	D3ZD73;A0A8I5Y7L2	D3ZD73_RAT	Ddx6	DEAD-box helicase 6	0	SLYVAEYHSEPAEDEKP	SLYVAEYHSEPAEDEKP	3	SLYVAEYHSEPAEDEKP3	13879.8	5811.84	10629.6
P01026	P01026	CO3_RAT	C3	Complement C3	1	SLYVSVTVILHSGSDMVEAER	SLYVSVTVILHSGSDMVEAER	3	SLYVSVTVILHSGSDMVEAER3	115666	75156.9	75346.9
A0JPM9	A0JPM9	EIF3J_RAT	Eif3j	Eukaryotic translation initiation factor 3 subunit J	1	SLYYASFLEALVR	SLYYASFLEALVR	2	SLYYASFLEALVR2	14558.9	9155.13	11712.5
A0JPM9	A0JPM9	EIF3J_RAT	Eif3j	Eukaryotic translation initiation factor 3 subunit J	1	SLYYASFLEALVR	SLYYASFLEALVR	3	SLYYASFLEALVR3	2391.54	4536.93	2986.44
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	SMAAFLSVQVPAEDQIR	SMAAFLSVQVPAEDQIR	2	SMAAFLSVQVPAEDQIR2	5737.36	5622.64	5148.26
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	SMAEDTVNK	SMAEDTVNK	2	SMAEDTVNK2	460131	453418	505920
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	SMAEQIEADVILLR	SMAEQIEADVILLR	2	SMAEQIEADVILLR2	11684.7	9112.93	6962.91
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	SMAEQIEADVILLR	SMAEQIEADVILLR	3	SMAEQIEADVILLR3	16408.5	9984.67	17738.5
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	SMALCVAACPR	SMALC(UniMod:4)VAAC(UniMod:4)PR	2	SMALC(UniMod:4)VAAC(UniMod:4)PR2	236599	309707	345014
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	SMALCVAACPR	SMALC(UniMod:4)VAAC(UniMod:4)PR	3	SMALC(UniMod:4)VAAC(UniMod:4)PR3	4053.4		6632.08
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	SMANPPAAVK	SMANPPAAVK	2	SMANPPAAVK2	248914	261167	280823
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	SMAPEPAQSSTITSSAQHVK	SMAPEPAQSSTITSSAQHVK	3	SMAPEPAQSSTITSSAQHVK3	35714.7	39467.5	47934.2
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	SMAQYVHNLDK	SMAQYVHNLDK	3	SMAQYVHNLDK3		5712.84	
O35568	O35568	FBLN3_RAT	Efemp1	EGF-containing fibulin-like extracellular matrix protein 1	1	SMATSGVIPGGGFIASATAVAGPEVQTGR	SMATSGVIPGGGFIASATAVAGPEVQTGR	3	SMATSGVIPGGGFIASATAVAGPEVQTGR3	20177.1	28299.6	21573.4
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	SMATYLLEENK	SMATYLLEENK	2	SMATYLLEENK2	1335.07	2050.1	
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	SMAWCENSICVGFK	SMAWC(UniMod:4)ENSIC(UniMod:4)VGFK	2	SMAWC(UniMod:4)ENSIC(UniMod:4)VGFK2		4489.92	3850.41
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	SMCGSPSGICLK	SMC(UniMod:4)GSPSGIC(UniMod:4)LK	2	SMC(UniMod:4)GSPSGIC(UniMod:4)LK2	413947	436722	404383
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	SMCQTAQGFCDSPGEK	SMC(UniMod:4)QTAQGFC(UniMod:4)DSPGEK	2	SMC(UniMod:4)QTAQGFC(UniMod:4)DSPGEK2	6504.2	3136.49	4818.01
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	SMDAETYVDGQR	SMDAETYVDGQR	2	SMDAETYVDGQR2	6732.77	7586.21	7813.41
G3V6A6	G3V6A6	G3V6A6_RAT	Chmp1b2	Similar to RIKEN cDNA 2610002M06	1	SMDATLR	SMDATLR	2	SMDATLR2	12446.8	14782.5	
D3Z8F6	D3Z8F6	D3Z8F6_RAT	Dennd1b	DENN domain containing 1B	1	SMDDIDYKPTNK	SMDDIDYKPTNK	3	SMDDIDYKPTNK3	14880.6	17529.2	
Q920J4	Q920J4	TXNL1_RAT	Txnl1	Thioredoxin-like protein 1	1	SMDFEEAER	SMDFEEAER	2	SMDFEEAER2	194514	187241	187730
Q5XI83	Q5XI83	VP35L_RAT	Vps35l	VPS35 endosomal protein-sorting factor-like	1	SMDFIGMIK	SMDFIGMIK	2	SMDFIGMIK2	13904.7	13797	7958.73
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	SMDGYESYGECVVALK	SMDGYESYGEC(UniMod:4)VVALK	2	SMDGYESYGEC(UniMod:4)VVALK2	1255.04	2495.03	3265.49
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	SMDLLGK	SMDLLGK	2	SMDLLGK2	65231.4	69012.1	61148.6
Q6VBQ5	Q6VBQ5	MYADM_RAT	Myadm	Myeloid-associated differentiation marker	1	SMDPSCSR	SMDPSC(UniMod:4)SR	2	SMDPSC(UniMod:4)SR2	425362	449647	463970
P55213	P55213	CASP3_RAT	Casp3	Caspase-3	1	SMDSGIYLDSSYK	SMDSGIYLDSSYK	2	SMDSGIYLDSSYK2	30785.4	30691.9	24466.5
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	SMEAEMIQLQEELAAAER	SMEAEMIQLQEELAAAER	3	SMEAEMIQLQEELAAAER3	3.86855e+06	4.23563e+06	3.65993e+06
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	SMEETRPVPTVK	SMEETRPVPTVK	3	SMEETRPVPTVK3	109622	80531.9	107140
P53565	P53565;A0A8I5ZR58	CUX1_RAT	Cux1	Homeobox protein cut-like 1	0	SMEFAPSEGAGTQDSTKPLEVLLLEK	SMEFAPSEGAGTQDSTKPLEVLLLEK	3	SMEFAPSEGAGTQDSTKPLEVLLLEK3	16765.7		6200.49
G3V6N7	G3V6N7	G3V6N7_RAT	Slc12a6	Solute carrier family 12, member 6	1	SMEGFQDLLNMRPDQSNVR	SMEGFQDLLNMRPDQSNVR	3	SMEGFQDLLNMRPDQSNVR3	18753	29047.9	22341.3
D3ZXJ5	D3ZXJ5	D3ZXJ5_RAT	Efl1	Elongation factor like GTPase 1	1	SMELLTSSLNEGR	SMELLTSSLNEGR	2	SMELLTSSLNEGR2	11088.1	10107.2	21121.7
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	SMELLVEHQAQDILT	SMELLVEHQAQDILT	2	SMELLVEHQAQDILT2	32591.8	29025.7	31437
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	SMELLVEHQAQDILT	SMELLVEHQAQDILT	3	SMELLVEHQAQDILT3		5356.22	6901.89
Q6P7C7	Q6P7C7	GPNMB_RAT	Gpnmb	Transmembrane glycoprotein NMB	1	SMELSDISNENCR	SMELSDISNENC(UniMod:4)R	2	SMELSDISNENC(UniMod:4)R2	8439.73	10497.1	6787.63
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	SMENHIGR	SMENHIGR	2	SMENHIGR2	17441.2	14626.2	
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	SMENIMEMNK	SMENIMEMNK	2	SMENIMEMNK2	15846.4		6633.89
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	SMEQNGPGLEYR	SMEQNGPGLEYR	2	SMEQNGPGLEYR2	8280.1	10158.8	12554.9
F1LQ09	F1LQ09	F1LQ09_RAT	Atl2	Atlastin GTPase 2	1	SMEQVCGGDKPYIAPSDLER	SMEQVC(UniMod:4)GGDKPYIAPSDLER	3	SMEQVC(UniMod:4)GGDKPYIAPSDLER3	77611	78616	87719.5
A0A8I5ZTB8	A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	SMERDPPFVLDASLGVISR	SMERDPPFVLDASLGVISR	3	SMERDPPFVLDASLGVISR3	11296.8	12508	11138.2
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	SMESCLK	SMESC(UniMod:4)LK	2	SMESC(UniMod:4)LK2	32186.4	30363.8	27177.7
A0A8I5ZXB9	A0A8I5ZXB9	A0A8I5ZXB9_RAT	Kifap3	Kinesin-associated protein 3	1	SMFAYTDCIPQLMK	SMFAYTDC(UniMod:4)IPQLMK	2	SMFAYTDC(UniMod:4)IPQLMK2	14229.1	17975.4	10445.5
Q5XI83	Q5XI83	VP35L_RAT	Vps35l	VPS35 endosomal protein-sorting factor-like	1	SMFCNLEPVLVQLIHSVNR	SMFC(UniMod:4)NLEPVLVQLIHSVNR	3	SMFC(UniMod:4)NLEPVLVQLIHSVNR3	5467.91		
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	SMFGSLEPPNIPQALPK	SMFGSLEPPNIPQALPK	2	SMFGSLEPPNIPQALPK2	26345.6	13687.2	15718
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	SMFQDVR	SMFQDVR	2	SMFQDVR2	235552	256453	260415
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	SMFTFVCGQLFR	SMFTFVC(UniMod:4)GQLFR	2	SMFTFVC(UniMod:4)GQLFR2	46438.4	27835.5	38382.2
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	SMFTFVCGQLFR	SMFTFVC(UniMod:4)GQLFR	3	SMFTFVC(UniMod:4)GQLFR3	1091.28	1671.11	1942.61
A0A0G2JZC4	A0A0G2JZC4	A0A0G2JZC4_RAT	Sema6d	Semaphorin 6D	1	SMGDGSALR	SMGDGSALR	2	SMGDGSALR2	16924	24421.9	15877.4
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	SMGFIGHYLDQK	SMGFIGHYLDQK	2	SMGFIGHYLDQK2	6205.7	7242.42	6755.84
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	SMGFIGHYLDQK	SMGFIGHYLDQK	3	SMGFIGHYLDQK3	7178.39	9346.11	4882.33
Q63525	Q63525	NUDC_RAT	Nudc	Nuclear migration protein nudC	1	SMGLPTSDEQK	SMGLPTSDEQK	2	SMGLPTSDEQK2	78219	74425.4	59525.4
Q63525	Q63525	NUDC_RAT	Nudc	Nuclear migration protein nudC	1	SMGLPTSDEQKK	SMGLPTSDEQKK	3	SMGLPTSDEQKK3	14150.2	13549.6	15234.8
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	SMGLTLAESELTK	SMGLTLAESELTK	2	SMGLTLAESELTK2	34982.2	43456.5	48729.5
Q68FW9	Q68FW9	CSN3_RAT	Cops3	COP9 signalosome complex subunit 3	1	SMGSQEDDSGNKPSSYS	SMGSQEDDSGNKPSSYS	2	SMGSQEDDSGNKPSSYS2	11283.8	20469.8	18009.6
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	SMGYCPQSDAIFDLLTGR	SMGYC(UniMod:4)PQSDAIFDLLTGR	3	SMGYC(UniMod:4)PQSDAIFDLLTGR3	1248.78	3521.1	
P36970	P36970	GPX4_RAT	Gpx4	Phospholipid hydroperoxide glutathione peroxidase	1	SMHEFAAK	SMHEFAAK	2	SMHEFAAK2	23325.3	20981.6	21807.7
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	SMHPELMK	SMHPELMK	2	SMHPELMK2	8148.06	6411.14	5515.14
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	SMIEISR	SMIEISR	2	SMIEISR2	394747	408251	475528
A0A0G2K712	A0A0G2K712	A0A0G2K712_RAT	Tbc1d5	TBC1 domain family, member 5	1	SMIEQDVR	SMIEQDVR	2	SMIEQDVR2	8669.95	10041.3	7545.33
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	SMIGSTAQQFLTFLSHR	SMIGSTAQQFLTFLSHR	3	SMIGSTAQQFLTFLSHR3	14017.6	13709.2	22871.8
A0A0G2JUU7	A0A0G2JUU7	A0A0G2JUU7_RAT	Tubgcp3	Gamma-tubulin complex component	1	SMIPSFITMDQSR	SMIPSFITMDQSR	2	SMIPSFITMDQSR2	15389.9	17286.5	8608
Q4FZY0	Q4FZY0	EFHD2_RAT	Efhd2	EF-hand domain-containing protein D2	1	SMIQEVDEDFDSK	SMIQEVDEDFDSK	2	SMIQEVDEDFDSK2	33778.3	27564.9	30624.2
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	SMIQSNTLTK	SMIQSNTLTK	2	SMIQSNTLTK2	117294	125194	92653
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	SMIQVPYR	SMIQVPYR	2	SMIQVPYR2	18437.3	14801.8	15746.8
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	SMISCNK	SMISC(UniMod:4)NK	2	SMISC(UniMod:4)NK2		18514	23228.2
Q3B8N7	Q3B8N7	T22D4_RAT	Tsc22d4	TSC22 domain family protein 4	1	SMLAISGHLDSDDDSGSGSLVGIDNK	SMLAISGHLDSDDDSGSGSLVGIDNK	3	SMLAISGHLDSDDDSGSGSLVGIDNK3	2728.84	4655.78	5577.36
P47820	P47820	ACE_RAT	Ace	Angiotensin-converting enzyme	1	SMLEKPTDGR	SMLEKPTDGR	2	SMLEKPTDGR2		3337.58	1038.57
Q5M7U6	Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	1	SMLEVNYPMENGIVR	SMLEVNYPMENGIVR	2	SMLEVNYPMENGIVR2	185968	171885	172558
Q5M7U6	Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	1	SMLEVNYPMENGIVR	SMLEVNYPMENGIVR	3	SMLEVNYPMENGIVR3	10939.8	17269.8	12751.9
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	SMLLLAPK	SMLLLAPK	2	SMLLLAPK2	90120.7	105029	92764.6
Q66HG5	Q66HG5	TM9S2_RAT	Tm9sf2	Transmembrane 9 superfamily member 2	1	SMLLNYQHHWIVDNMPVTWCYEVEDNQK	SMLLNYQHHWIVDNMPVTWC(UniMod:4)YEVEDNQK	4	SMLLNYQHHWIVDNMPVTWC(UniMod:4)YEVEDNQK4	33794.9	35129.3	17058.3
A0A0G2K762	A0A0G2K762	A0A0G2K762_RAT	Abcf2	ATP binding cassette subfamily F member 2	1	SMLLSAVGK	SMLLSAVGK	2	SMLLSAVGK2	12532.2	11646.8	10731.2
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	SMLNFLK	SMLNFLK	2	SMLNFLK2	84951.4	85056.7	85347.1
F1LQ09	F1LQ09	F1LQ09_RAT	Atl2	Atlastin GTPase 2	1	SMLQATAEANNLAAVAGAR	SMLQATAEANNLAAVAGAR	2	SMLQATAEANNLAAVAGAR2	20281.7	19363.7	21296.2
F1LQ09	F1LQ09	F1LQ09_RAT	Atl2	Atlastin GTPase 2	1	SMLQATAEANNLAAVAGAR	SMLQATAEANNLAAVAGAR	3	SMLQATAEANNLAAVAGAR3	20240.5	16800.7	24781.2
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	SMLRPLELSLPSQTSYSENEILK	SMLRPLELSLPSQTSYSENEILK	3	SMLRPLELSLPSQTSYSENEILK3	43411.6	37930.3	41449
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	SMLRPLELSLPSQTSYSENEILKK	SMLRPLELSLPSQTSYSENEILKK	4	SMLRPLELSLPSQTSYSENEILKK4	22441.1	10628.5	10115.9
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	SMLVISGGEGYIDFR	SMLVISGGEGYIDFR	2	SMLVISGGEGYIDFR2	6555.64	5219.07	
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	SMMACLLSSLK	SMMAC(UniMod:4)LLSSLK	2	SMMAC(UniMod:4)LLSSLK2	15133.6	24600.1	27258.8
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	SMMCPPGMHK	SMMC(UniMod:4)PPGMHK	3	SMMC(UniMod:4)PPGMHK3	23062.2	20613.8	22484.7
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	SMMFEPGLTK	SMMFEPGLTK	2	SMMFEPGLTK2	24238	28691	21796.7
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	SMMFGVK	SMMFGVK	2	SMMFGVK2	47842.2	66252.4	57570.2
Q9QZG1	Q9QZG1	S22AN_RAT	Slc22a23	Solute carrier family 22 member 23	1	SMMGHEVK	SMMGHEVK	2	SMMGHEVK2		7543.99	
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	SMMNTWTLQK	SMMNTWTLQK	2	SMMNTWTLQK2	10204.2	7191.09	12935.3
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	SMMQDREDQSILCTGESGAGK	SMMQDREDQSILC(UniMod:4)TGESGAGK	3	SMMQDREDQSILC(UniMod:4)TGESGAGK3	73373.1	1.25303e+07	1.05015e+07
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	SMMQDREDQSILCTGESGAGK	SMMQDREDQSILC(UniMod:4)TGESGAGK	4	SMMQDREDQSILC(UniMod:4)TGESGAGK4		36453.4	42225.3
A0A8I5ZN89	A0A8I5ZN89	A0A8I5ZN89_RAT	Gcdh	Glutaryl-CoA dehydrogenase	1	SMMSVQSSLVMHPIYTYGSEEQR	SMMSVQSSLVMHPIYTYGSEEQR	3	SMMSVQSSLVMHPIYTYGSEEQR3	12394.7	5885.82	9415.43
D3ZLZ7	D3ZLZ7	IMDH1_RAT	Impdh1	Inosine-5'-monophosphate dehydrogenase 1	1	SMMYSGELK	SMMYSGELK	2	SMMYSGELK2	9104.62	20976.7	14672.9
Q68FX1	Q68FX1	MPI_RAT	Mpi	Mannose-6-phosphate isomerase	1	SMNEGSGAMASALK	SMNEGSGAMASALK	2	SMNEGSGAMASALK2	4636.19	2399.19	
D4ACN8	D4ACN8	PLRKT_RAT	Plgrkt	Plasminogen receptor (KT)	1	SMNENMK	SMNENMK	1	SMNENMK1	2428.95	1694.05	779.484
D4ACN8	D4ACN8	PLRKT_RAT	Plgrkt	Plasminogen receptor (KT)	1	SMNENMK	SMNENMK	2	SMNENMK2	86335	81263	115120
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	SMNIDLWSK	SMNIDLWSK	2	SMNIDLWSK2	14449.3	7641.79	10130
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	SMNIFGGFR	SMNIFGGFR	2	SMNIFGGFR2	405323	407139	447344
D3ZUB7	D3ZUB7	D3ZUB7_RAT	Anapc4	Anaphase-promoting complex subunit 4	1	SMNQAICIPLYK	SMNQAIC(UniMod:4)IPLYK	2	SMNQAIC(UniMod:4)IPLYK2	19199.8	15111.6	19852.6
Q32PX2	Q32PX2	AIMP2_RAT	Aimp2	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2	1	SMNSALGK	SMNSALGK	2	SMNSALGK2	56060.4	53472.6	64044.1
P30836	P30836	LYAM1_RAT	Sell	L-selectin	1	SMNWENAR	SMNWENAR	2	SMNWENAR2	46894.6	44274.9	47648.1
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	SMPEHPAFQNELGIAALR	SMPEHPAFQNELGIAALR	3	SMPEHPAFQNELGIAALR3	62388.9	65030.4	55556.3
P62890	P62890;F1M3Q4	RL30_RAT	Rpl30	Large ribosomal subunit protein eL30	0	SMPEQTGEK	SMPEQTGEK	2	SMPEQTGEK2	67556.1		52020.3
O35964	O35964	SH3G1_RAT	Sh3gl1	Endophilin-A2	1	SMPPLDQPSCK	SMPPLDQPSC(UniMod:4)K	2	SMPPLDQPSC(UniMod:4)K2	145638	127739	178937
P38652	P38652	PGM1_RAT	Pgm1	Phosphoglucomutase-1	1	SMPTSGALDR	SMPTSGALDR	2	SMPTSGALDR2	28877.6	32898.9	28293.3
A0A8I5ZRG3	A0A8I5ZRG3	A0A8I5ZRG3_RAT	Frmd4b	FERM domain containing 4B	1	SMPTTPVLTR	SMPTTPVLTR	2	SMPTTPVLTR2	67813	53152.7	78241
A0A8I5ZSR7	A0A8I5ZSR7	A0A8I5ZSR7_RAT	ENSRNOG00000070662	Ig-like domain-containing protein	1	SMQAEDTADYYCAR	SMQAEDTADYYC(UniMod:4)AR	2	SMQAEDTADYYC(UniMod:4)AR2	5404.28		6625.69
A0A0G2K6R0	A0A0G2K6R0	A0A0G2K6R0_RAT	Tnrc6b	Trinucleotide repeat containing adaptor 6B	1	SMQDGWGESDGPVTGAR	SMQDGWGESDGPVTGAR	2	SMQDGWGESDGPVTGAR2	3634.65	3638.81	3171
D4A164	D4A164	D4A164_RAT	Nebl	Nebulette	1	SMQHSANLR	SMQHSANLR	2	SMQHSANLR2	5912.45		20162.3
D3ZRX9	D3ZRX9	D3ZRX9_RAT	Cnn2	Calponin	1	SMQNWHQLENLSNFIK	SMQNWHQLENLSNFIK	3	SMQNWHQLENLSNFIK3	189507	179503	158230
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	SMQSHAAVFR	SMQSHAAVFR	2	SMQSHAAVFR2	10044.4	13427.1	17988.3
A0A8I6G6W8	A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	SMQTSQSHSSLTAELWDNK	SMQTSQSHSSLTAELWDNK	3	SMQTSQSHSSLTAELWDNK3	5707.2	10184.2	
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	SMSASSGLSAR	SMSASSGLSAR	2	SMSASSGLSAR2	33233.8	32846.8	29941.5
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	SMSDPDQDFDKEPDSDSTK	SMSDPDQDFDKEPDSDSTK	3	SMSDPDQDFDKEPDSDSTK3	82455.2	121038	83996.4
Q4KM98	Q4KM98	MFF_RAT	Mff	Mitochondrial fission factor	1	SMSENAVR	SMSENAVR	2	SMSENAVR2	161204	168911	167200
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	SMSGHPEAAQMVR	SMSGHPEAAQMVR	2	SMSGHPEAAQMVR2	30401	17404.8	15482.6
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	SMSGHPEAAQMVR	SMSGHPEAAQMVR	3	SMSGHPEAAQMVR3	252399	305836	263380
Q8VHI8	Q8VHI8	SEC20_RAT	Bnip1	Vesicle transport protein SEC20	1	SMSGTIQLGR	SMSGTIQLGR	2	SMSGTIQLGR2	14476.2	5639.2	4323.2
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	SMSGYLSGFQAR	SMSGYLSGFQAR	2	SMSGYLSGFQAR2	8778.1	8612.42	6074.57
B1WBS4	B1WBS4	B1WBS4_RAT	Vps26b	VPS26 retromer complex component B	1	SMSHQAAIASQR	SMSHQAAIASQR	3	SMSHQAAIASQR3	38557.1	24671.5	23704.8
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	SMSIDDTPR	SMSIDDTPR	2	SMSIDDTPR2	51426.2	48034.4	60384.4
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	SMSIVLR	SMSIVLR	2	SMSIVLR2	78468.1	82498.1	54203.6
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	SMSLHIGGAR	SMSLHIGGAR	2	SMSLHIGGAR2	3712.83		2969.28
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	SMSLTMGK	SMSLTMGK	2	SMSLTMGK2	226189	203739	256805
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	SMSLYLSNK	SMSLYLSNK	2	SMSLYLSNK2	13103.7	16160.9	14817.1
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	SMSMAASCWGR	SMSMAASC(UniMod:4)WGR	2	SMSMAASC(UniMod:4)WGR2	13444.2	8890.88	13783.6
Q5PPK9	Q5PPK9	EIPR1_RAT	Eipr1	EARP and GARP complex-interacting protein 1	1	SMSQIYCIENAHGQLVR	SMSQIYC(UniMod:4)IENAHGQLVR	3	SMSQIYC(UniMod:4)IENAHGQLVR3	14824.6	21058	21140.1
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	SMSQLAILTR	SMSQLAILTR	2	SMSQLAILTR2	37802.9	34667.5	32373.1
F1M8V2	F1M8V2	F1M8V2_RAT	Ube4b	Ubiquitin conjugation factor E4	1	SMSQVDVDSGIENMEVDENDRR	SMSQVDVDSGIENMEVDENDRR	3	SMSQVDVDSGIENMEVDENDRR3	7037.95	6792.31	
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	SMSSLQDDRDR	SMSSLQDDRDR	3	SMSSLQDDRDR3	162723	192448	183427
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	SMSSLQDSR	SMSSLQDSR	2	SMSSLQDSR2	34750.7	42138	33387.3
G3V6R7	G3V6R7	G3V6R7_RAT	Oxsm	3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial	1	SMSSPTIMAVGAAELALK	SMSSPTIMAVGAAELALK	2	SMSSPTIMAVGAAELALK2	1441.06	4667.27	1342.77
G3V8Z6	G3V8Z6	G3V8Z6_RAT	Krit1	KRIT1, ankyrin repeat containing	1	SMSSVVEDKER	SMSSVVEDKER	3	SMSSVVEDKER3	25439.2	17409.1	14704.6
Q8VHF5	Q8VHF5	CISY_RAT	Cs	Citrate synthase, mitochondrial	1	SMSTDGLMK	SMSTDGLMK	1	SMSTDGLMK1	8387.26	8234.4	8330.11
Q8VHF5	Q8VHF5	CISY_RAT	Cs	Citrate synthase, mitochondrial	1	SMSTDGLMK	SMSTDGLMK	2	SMSTDGLMK2	625772	581420	613382
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	SMSTTGSLQR	SMSTTGSLQR	2	SMSTTGSLQR2	17317.8	20048.2	22138.2
P11506	P11506	AT2B2_RAT	Atp2b2	Plasma membrane calcium-transporting ATPase 2	1	SMSTVIK	SMSTVIK	2	SMSTVIK2	24497.5	28269.1	30456.3
Q64542	Q64542;Q64568	AT2B4_RAT	Atp2b4	Plasma membrane calcium-transporting ATPase 4	0	SMSTVIR	SMSTVIR	2	SMSTVIR2	26555.4	30034.7	25548.3
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	SMSVDLSHAPLKDPLLFK	SMSVDLSHAPLKDPLLFK	3	SMSVDLSHAPLKDPLLFK3	13515.5	15955.6	22893.6
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	SMSVDLSHAPLKDPLLFK	SMSVDLSHAPLKDPLLFK	4	SMSVDLSHAPLKDPLLFK4	15659	14960.2	10923.7
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	SMSVYCTPNKPSR	SMSVYC(UniMod:4)TPNKPSR	2	SMSVYC(UniMod:4)TPNKPSR2	35924.4	33903.7	31566.5
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	SMSVYCTPNKPSR	SMSVYC(UniMod:4)TPNKPSR	3	SMSVYC(UniMod:4)TPNKPSR3	1.14683e+06	1.30848e+06	1.28628e+06
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	SMSVYCTPTR	SMSVYC(UniMod:4)TPTR	2	SMSVYC(UniMod:4)TPTR2	1.76439e+06	1.95024e+06	1.99945e+06
Q2THW7	Q2THW7	ZDHC5_RAT	Zdhhc5	Palmitoyltransferase ZDHHC5	1	SMSYSSQK	SMSYSSQK	2	SMSYSSQK2	11924.5		
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	SMTASGNLGHTPFLDEL	SMTASGNLGHTPFLDEL	2	SMTASGNLGHTPFLDEL2	58605.2	50800.3	67643.9
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	SMTLADPENR	SMTLADPENR	2	SMTLADPENR2	162670	133894	162471
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	SMTLEIR	SMTLEIR	2	SMTLEIR2	103181	75087.8	104073
P11960	P11960	ODBA_RAT	Bckdha	2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment)	1	SMTLLNTMDR	SMTLLNTMDR	2	SMTLLNTMDR2	6493.41	26139.7	21760.4
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	SMTNINDGLLR	SMTNINDGLLR	2	SMTNINDGLLR2	477312	510568	427151
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	SMTNINDGLLR	SMTNINDGLLR	3	SMTNINDGLLR3	83518.6	91693.5	90815.5
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	SMTNINDGLLRGIEMLNK	SMTNINDGLLRGIEMLNK	3	SMTNINDGLLRGIEMLNK3	50242.8	45758	59312.2
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	SMTPAQADLEFLENAK	SMTPAQADLEFLENAK	2	SMTPAQADLEFLENAK2	69972.3	70978.9	59072
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	SMTPAQADLEFLENAK	SMTPAQADLEFLENAK	3	SMTPAQADLEFLENAK3	53488.1	53446.5	57156.8
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	SMTPAQADLEFLENAKK	SMTPAQADLEFLENAKK	2	SMTPAQADLEFLENAKK2	1514.44		
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	SMTPAQADLEFLENAKK	SMTPAQADLEFLENAKK	3	SMTPAQADLEFLENAKK3	86608.9	133017	83809.1
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	SMTSLAQK	SMTSLAQK	2	SMTSLAQK2	34491.9	31982.9	32078.8
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	SMTSTHGSPSVNSR	SMTSTHGSPSVNSR	3	SMTSTHGSPSVNSR3	38611.3	53444.9	54526.8
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	SMTVSAAPR	SMTVSAAPR	2	SMTVSAAPR2	31307.8	26872.3	30500.3
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	SMTVSAAPRPGEDMEACDELALALSR	SMTVSAAPRPGEDMEAC(UniMod:4)DELALALSR	3	SMTVSAAPRPGEDMEAC(UniMod:4)DELALALSR3	24540.3	10298	22990.5
D4AE59	D4AE59	STK11_RAT	Stk11	Serine/threonine-protein kinase STK11	1	SMTVVPYLEDLHGR	SMTVVPYLEDLHGR	3	SMTVVPYLEDLHGR3	7312.03	10487.3	5305.12
Q64537	Q64537	CPNS1_RAT	Capns1	Calpain small subunit 1	1	SMVAVMDSDTTGK	SMVAVMDSDTTGK	2	SMVAVMDSDTTGK2	2.89795e+06	3.08686e+06	3.12495e+06
D3ZK56	D3ZK56	D3ZK56_RAT	Rap2c	Ras-related protein Rap-2	1	SMVDELFAEIVR	SMVDELFAEIVR	2	SMVDELFAEIVR2	1609.73	3319.43	878.977
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	SMVEALAAPSD	SMVEALAAPSD	2	SMVEALAAPSD2	29398.3	22825.3	22670.6
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	SMVHHLYFNDK	SMVHHLYFNDK	3	SMVHHLYFNDK3	9031.99	8882.29	8917.21
O08623	O08623	SQSTM_RAT	Sqstm1	Sequestosome-1	1	SMVHPNVICDGCNGPVVGTR	SMVHPNVIC(UniMod:4)DGC(UniMod:4)NGPVVGTR	3	SMVHPNVIC(UniMod:4)DGC(UniMod:4)NGPVVGTR3	35014.9	39743.2	35218.9
Q9EQG6	Q9EQG6	KDIS_RAT	Kidins220	Kinase D-interacting substrate of 220 kDa	1	SMVLEMR	SMVLEMR	2	SMVLEMR2	10926.2	8718.52	11014.3
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	SMVNLMDR	SMVNLMDR	2	SMVNLMDR2	270538	245998	240273
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	SMVNLMDRDGNGK	SMVNLMDRDGNGK	3	SMVNLMDRDGNGK3	32025.3	28923.4	47688.9
Q63692	Q63692	CDC37_RAT	Cdc37	Hsp90 co-chaperone Cdc37	1	SMVNTKPEK	SMVNTKPEK	2	SMVNTKPEK2	36035		37097.7
O88959	O88959	INHBE_RAT	Inhbe	Inhibin beta E chain	1	SMVPGNR	SMVPGNR	2	SMVPGNR2	71355.4	75509.1	75328.1
A0A8I6AK45	A0A8I6AK45	A0A8I6AK45_RAT	Mtch2	Mitochondrial carrier 2	1	SMVQFIGR	SMVQFIGR	2	SMVQFIGR2	222418	223219	237086
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	SMVSTIMK	SMVSTIMK	2	SMVSTIMK2	42854	45529	47965.6
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	SMVVADSVSHITQHLQHQALNSISVAK	SMVVADSVSHITQHLQHQALNSISVAK	3	SMVVADSVSHITQHLQHQALNSISVAK3	4577.41	6758.52	3392.5
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	SMVVADSVSHITQHLQHQALNSISVAK	SMVVADSVSHITQHLQHQALNSISVAK	4	SMVVADSVSHITQHLQHQALNSISVAK4	10586.2	18380.5	17735.9
F1LZ11	F1LZ11	F1LZ11_RAT	AABR07065814.2	Ig-like domain-containing protein	1	SMVYLQMDNLK	SMVYLQMDNLK	2	SMVYLQMDNLK2	109745	157136	141730
A0A8J8YNE4	A0A8J8YNE4	A0A8J8YNE4_RAT	Apool	MICOS complex subunit	1	SMWTQSSEK	SMWTQSSEK	2	SMWTQSSEK2	36894.7	30862.3	35123.3
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	SNAAAYLQHLCYR	SNAAAYLQHLC(UniMod:4)YR	2	SNAAAYLQHLC(UniMod:4)YR2	7411.35	7586.77	4552.45
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	SNAAAYLQHLCYR	SNAAAYLQHLC(UniMod:4)YR	3	SNAAAYLQHLC(UniMod:4)YR3	55573.4	35530.7	41930.7
B3DMA5	B3DMA5	B3DMA5_RAT	Cnot7	poly(A)-specific ribonuclease	1	SNADYQYQLLR	SNADYQYQLLR	2	SNADYQYQLLR2	3936.65	2990.83	
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	SNAEITYTLFGSGAEK	SNAEITYTLFGSGAEK	2	SNAEITYTLFGSGAEK2	11835.4	11269.9	6717.09
A0A0G2K6C7	A0A0G2K6C7	A0A0G2K6C7_RAT	Trim5	Tripartite motif-containing 5	1	SNAERPPNPPLFR	SNAERPPNPPLFR	3	SNAERPPNPPLFR3	53338.2	42761.2	45848.7
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	SNAHYNLQNAFNLAEQHLGLTK	SNAHYNLQNAFNLAEQHLGLTK	3	SNAHYNLQNAFNLAEQHLGLTK3	79401.6	53713.6	55958
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	SNAHYNLQNAFNLAEQHLGLTK	SNAHYNLQNAFNLAEQHLGLTK	4	SNAHYNLQNAFNLAEQHLGLTK4	408149	510217	522707
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	SNAIFGLGVLAEHGGCPAQDHFPK	SNAIFGLGVLAEHGGC(UniMod:4)PAQDHFPK	3	SNAIFGLGVLAEHGGC(UniMod:4)PAQDHFPK3	8761.82	19089.2	8775.92
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	SNAIFGLGVLAEHGGCPAQDHFPK	SNAIFGLGVLAEHGGC(UniMod:4)PAQDHFPK	4	SNAIFGLGVLAEHGGC(UniMod:4)PAQDHFPK4	15219.9	21758.2	8281.71
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	SNAILGQYQAYSGQVR	SNAILGQYQAYSGQVR	2	SNAILGQYQAYSGQVR2	12327.5	13356.3	10413.9
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	SNAILGQYQAYSGQVR	SNAILGQYQAYSGQVR	3	SNAILGQYQAYSGQVR3	2411.59	6184.05	9807.28
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	SNAINIGLTTLPPVHVIK	SNAINIGLTTLPPVHVIK	2	SNAINIGLTTLPPVHVIK2	11175.5	10937.4	7033.99
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	SNAINIGLTTLPPVHVIK	SNAINIGLTTLPPVHVIK	3	SNAINIGLTTLPPVHVIK3	219077	236463	197792
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	SNALSGFSLQHCR	SNALSGFSLQHC(UniMod:4)R	2	SNALSGFSLQHC(UniMod:4)R2	7591.13	6753.25	5106.85
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	SNALSGFSLQHCR	SNALSGFSLQHC(UniMod:4)R	3	SNALSGFSLQHC(UniMod:4)R3	40618.2	31958.9	42228.3
Q32Q55	Q32Q55	Q32Q55_RAT	Ces2h	Carboxylic ester hydrolase	1	SNAPVYFYEFQHRPSFFK	SNAPVYFYEFQHRPSFFK	4	SNAPVYFYEFQHRPSFFK4	8018.66	13614.8	5607.75
P15087	P15087	CBPE_RAT	Cpe	Carboxypeptidase E	1	SNAQGIDLNR	SNAQGIDLNR	2	SNAQGIDLNR2	8908.88	10695.7	
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	SNAYLAQSPQLYK	SNAYLAQSPQLYK	2	SNAYLAQSPQLYK2	51306.9	56183.3	58189
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	SNCDHTEDAGLVCTGPAPR	SNC(UniMod:4)DHTEDAGLVC(UniMod:4)TGPAPR	3	SNC(UniMod:4)DHTEDAGLVC(UniMod:4)TGPAPR3	17755.9	32631.3	26096.3
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	SNCKPSTFAYPAPLEVPK	SNC(UniMod:4)KPSTFAYPAPLEVPK	3	SNC(UniMod:4)KPSTFAYPAPLEVPK3	129830	155097	157195
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	SNCKPSTFAYPAPLEVPKEK	SNC(UniMod:4)KPSTFAYPAPLEVPKEK	3	SNC(UniMod:4)KPSTFAYPAPLEVPKEK3	8951.96	8944.84	4912.47
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	SNCKPSTFAYPAPLEVPKEK	SNC(UniMod:4)KPSTFAYPAPLEVPKEK	4	SNC(UniMod:4)KPSTFAYPAPLEVPKEK4	30692.3	35915.3	36366.8
D3ZES7	D3ZPX4;A0A8I6AGW9;D3ZWP6;D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	0	SNCLPLR	SNC(UniMod:4)LPLR	2	SNC(UniMod:4)LPLR2	56511.1	55443	44330.9
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	SNCMDCLDR	SNC(UniMod:4)MDC(UniMod:4)LDR	2	SNC(UniMod:4)MDC(UniMod:4)LDR2	253811	212589	257944
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	SNCNVAIINVGAPAAGMNAAVR	SNC(UniMod:4)NVAIINVGAPAAGMNAAVR	3	SNC(UniMod:4)NVAIINVGAPAAGMNAAVR3	61792.3	81443.2	67670.1
Q63357	Q63357	MYO1D_RAT	Myo1d	Unconventional myosin-Id	1	SNCVLEAFGNAK	SNC(UniMod:4)VLEAFGNAK	2	SNC(UniMod:4)VLEAFGNAK2	3360.64		
Q925Q9	Q925Q9	SH3K1_RAT	Sh3kbp1	SH3 domain-containing kinase-binding protein 1	1	SNDIDLEGFDSVISSTEK	SNDIDLEGFDSVISSTEK	2	SNDIDLEGFDSVISSTEK2	2541.11	1850.27	3355.48
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	SNDLFPVHHLDNNEFCPGDFVVDK	SNDLFPVHHLDNNEFC(UniMod:4)PGDFVVDK	3	SNDLFPVHHLDNNEFC(UniMod:4)PGDFVVDK3	101530	87589.7	103047
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	SNDLFPVHHLDNNEFCPGDFVVDK	SNDLFPVHHLDNNEFC(UniMod:4)PGDFVVDK	4	SNDLFPVHHLDNNEFC(UniMod:4)PGDFVVDK4	249439	257851	270936
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	SNDLFPVHHLDNNEFCPGDFVVDKR	SNDLFPVHHLDNNEFC(UniMod:4)PGDFVVDKR	4	SNDLFPVHHLDNNEFC(UniMod:4)PGDFVVDKR4	189654	194609	195265
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	SNDPVAAAFADMLK	SNDPVAAAFADMLK	2	SNDPVAAAFADMLK2	522436	483387	461224
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	SNDPVAAAFADMLK	SNDPVAAAFADMLK	3	SNDPVAAAFADMLK3	53556.5	60420.8	68528.3
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	SNDRVDVTSSFPMTDTAR	SNDRVDVTSSFPMTDTAR	3	SNDRVDVTSSFPMTDTAR3	24614.1	26932.3	25942
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	SNDSQQQDVSEFTHK	SNDSQQQDVSEFTHK	3	SNDSQQQDVSEFTHK3	5233.5	8323.06	4782.72
Q62991	Q62991	SCFD1_RAT	Scfd1	Sec1 family domain-containing protein 1	1	SNDSSVPR	SNDSSVPR	2	SNDSSVPR2			24638.4
Q66H91	Q66H91	GIT2_RAT	Git2	ARF GTPase-activating protein GIT2	1	SNDVCADCSGPDPSWASVNR	SNDVC(UniMod:4)ADC(UniMod:4)SGPDPSWASVNR	3	SNDVC(UniMod:4)ADC(UniMod:4)SGPDPSWASVNR3	2975.53	3041.91	6020.47
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	SNDYVFTDNMICAGEK	SNDYVFTDNMIC(UniMod:4)AGEK	2	SNDYVFTDNMIC(UniMod:4)AGEK2	26103	17157.5	25204.8
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	SNDYVFTDNMICAGEK	SNDYVFTDNMIC(UniMod:4)AGEK	3	SNDYVFTDNMIC(UniMod:4)AGEK3	1.02422e+06	1.18673e+06	1.25457e+06
Q9EQX9	Q9EQX9	UBE2N_RAT	Ube2n	Ubiquitin-conjugating enzyme E2 N	1	SNEAQAIETAR	SNEAQAIETAR	2	SNEAQAIETAR2	58657.7	51254.1	43928.3
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	SNEEEDTPGSSLEK	SNEEEDTPGSSLEK	2	SNEEEDTPGSSLEK2	25903.2	17605.1	21346.6
D4ADQ1	D4ADQ1	D4ADQ1_RAT	Rrm2b	Ribonucleotide reductase regulatory TP53 inducible subunit M2B	1	SNEEPLLR	SNEEPLLR	2	SNEEPLLR2	65903.1	55181.4	55005.3
D4ADQ1	D4ADQ1	D4ADQ1_RAT	Rrm2b	Ribonucleotide reductase regulatory TP53 inducible subunit M2B	1	SNEEPLLRK	SNEEPLLRK	2	SNEEPLLRK2	2367.14	3849.9	6223.37
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	SNEFDYPSVGQLAHK	SNEFDYPSVGQLAHK	2	SNEFDYPSVGQLAHK2	11870.9	8865.56	13946.3
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	SNEFDYPSVGQLAHK	SNEFDYPSVGQLAHK	3	SNEFDYPSVGQLAHK3	171881	156653	178320
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	SNEILTAIIQGMR	SNEILTAIIQGMR	2	SNEILTAIIQGMR2	124428	213145	210261
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	SNEILTAIIQGMR	SNEILTAIIQGMR	3	SNEILTAIIQGMR3	54996.6	85213.3	95767.6
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	SNENQDFCGTSPTPLPSPSPSGQNVER	SNENQDFC(UniMod:4)GTSPTPLPSPSPSGQNVER	3	SNENQDFC(UniMod:4)GTSPTPLPSPSPSGQNVER3	119983	135196	133239
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	SNEQIVSEK	SNEQIVSEK	2	SNEQIVSEK2	31498.4	24753	29092.6
A0A0G2K9M5	A0A0G2K9M5	A0A0G2K9M5_RAT	Tbc1d8b	TBC1 domain family member 8B	1	SNEYFVLQR	SNEYFVLQR	2	SNEYFVLQR2	5311.34	3261.26	2140.35
Q63803	Q63803	GNAS1_RAT	Gnas	Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas	1	SNEYQLIDCAQYFLDK	SNEYQLIDC(UniMod:4)AQYFLDK	3	SNEYQLIDC(UniMod:4)AQYFLDK3	11731.8		5363.61
P81155	P81155	VDAC2_RAT	Vdac2	Voltage-dependent anion-selective channel protein 2	1	SNFAVGYR	SNFAVGYR	2	SNFAVGYR2	656229	477318	428279
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	SNFDLNSDLHLPAENK	SNFDLNSDLHLPAENK	2	SNFDLNSDLHLPAENK2	6365.56	8864.18	7660.38
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	SNFDLNSDLHLPAENK	SNFDLNSDLHLPAENK	3	SNFDLNSDLHLPAENK3	30706.6	37384.5	49454
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	SNFELLEK	SNFELLEK	2	SNFELLEK2	21692.8	25928.7	21886.6
P18422	P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	1	SNFGYNIPLK	SNFGYNIPLK	2	SNFGYNIPLK2	3.23272e+06	3.00374e+06	3.60524e+06
Q9EPX4	Q9EPX4	P2Y12_RAT	P2ry12	P2Y purinoceptor 12	1	SNFIIFLK	SNFIIFLK	2	SNFIIFLK2	6571.53	6681.49	4833.78
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	SNFKPSLLAQK	SNFKPSLLAQK	2	SNFKPSLLAQK2	9382.22		10036.2
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	SNFKPSLLAQK	SNFKPSLLAQK	3	SNFKPSLLAQK3	58619	46462.1	60718.5
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	SNFLAQATNSHLK	SNFLAQATNSHLK	2	SNFLAQATNSHLK2	17764.7	11367.8	16403.9
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	SNFLAQATNSHLK	SNFLAQATNSHLK	3	SNFLAQATNSHLK3	58655.5	54500.2	54478.9
O70196	O70196	PPCE_RAT	Prep	Prolyl endopeptidase	1	SNFLVLCYLR	SNFLVLC(UniMod:4)YLR	2	SNFLVLC(UniMod:4)YLR2	3080.7	3012.29	8666.16
A0A8I6AS56	A0A8I6AS56	A0A8I6AS56_RAT	Abhd11	Abhydrolase domain containing 11	1	SNFNSLAK	SNFNSLAK	2	SNFNSLAK2	14489	12547.2	12634.2
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	SNFQTVQK	SNFQTVQK	2	SNFQTVQK2	34603.9	31360	32091.4
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	SNFSILQLHEFK	SNFSILQLHEFK	2	SNFSILQLHEFK2	1485.26	3061.76	1913.09
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	SNFSILQLHEFK	SNFSILQLHEFK	3	SNFSILQLHEFK3	5829.9	4700.54	5605.06
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	SNFSLAILNVGAPAAGMNAAVR	SNFSLAILNVGAPAAGMNAAVR	3	SNFSLAILNVGAPAAGMNAAVR3	12998.4	11061.2	8158.22
Q62904	Q62904	DHB7_RAT	Hsd17b7	3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7	1	SNFSLEDIQHAK	SNFSLEDIQHAK	3	SNFSLEDIQHAK3	4965.26	4085.19	3732.94
P54748	P54748	PDE4A_RAT	Pde4a	cAMP-specific 3',5'-cyclic phosphodiesterase 4A	1	SNFSLLTNVPIPSNK	SNFSLLTNVPIPSNK	2	SNFSLLTNVPIPSNK2	4443.96	4587.15	
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	SNFTKPELMASLLPQLTGAENVLK	SNFTKPELMASLLPQLTGAENVLK	3	SNFTKPELMASLLPQLTGAENVLK3	12924.1	14970.7	16797
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	SNFTVDCSK	SNFTVDC(UniMod:4)SK	2	SNFTVDC(UniMod:4)SK2	5.37332e+06	5.27164e+06	4.56797e+06
Q2M2S1	Q2M2S1	Q2M2S1_RAT	Tor1b	Torsin	1	SNFVHLFVSTLHFPHEQK	SNFVHLFVSTLHFPHEQK	4	SNFVHLFVSTLHFPHEQK4	4553.31	7773.98	
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	SNFVRPNETK	SNFVRPNETK	2	SNFVRPNETK2	9668.95	13261.6	11297
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	SNFVRPNETK	SNFVRPNETK	3	SNFVRPNETK3	222737	307936	346655
P08460	P08460	NID1_RAT	Nid1	Nidogen-1 (Fragment)	1	SNGAYNIFANDR	SNGAYNIFANDR	2	SNGAYNIFANDR2	75252	66864.4	62655.2
P08460	P08460	NID1_RAT	Nid1	Nidogen-1 (Fragment)	1	SNGAYNIFANDRESIENLAK	SNGAYNIFANDRESIENLAK	3	SNGAYNIFANDRESIENLAK3	154127	161950	187360
A0A8I6A8Q1	A0A8I6A8Q1	A0A8I6A8Q1_RAT	A2ml1	Alpha-2-macroglobulin-like 1	1	SNGCFRK	SNGC(UniMod:4)FRK	2	SNGC(UniMod:4)FRK2			3614.17
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	SNGGNLLCAVDESNDHVLSVWDWAK	SNGGNLLC(UniMod:4)AVDESNDHVLSVWDWAK	3	SNGGNLLC(UniMod:4)AVDESNDHVLSVWDWAK3	10925.5	11107.2	17270.3
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	SNGGSHLCAVDDSNDHVLSVWDWQR	SNGGSHLC(UniMod:4)AVDDSNDHVLSVWDWQR	4	SNGGSHLC(UniMod:4)AVDDSNDHVLSVWDWQR4	7773.1	3833.08	3068.08
Q5FVQ9	Q5FVQ9	TBCE_RAT	Tbce	Tubulin-specific chaperone E	1	SNGISISERPVNALQNLR	SNGISISERPVNALQNLR	3	SNGISISERPVNALQNLR3	8800.45	9771.8	5642.08
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	SNGLICGGNGVCR	SNGLIC(UniMod:4)GGNGVC(UniMod:4)R	2	SNGLIC(UniMod:4)GGNGVC(UniMod:4)R2	147704	145875	152276
O55043	O55043	ARHG7_RAT	Arhgef7	Rho guanine nucleotide exchange factor 7	1	SNGQTVIEEK	SNGQTVIEEK	2	SNGQTVIEEK2	13041.1	10834.5	15864.5
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	SNGSLLWCEVEK	SNGSLLWC(UniMod:4)EVEK	2	SNGSLLWC(UniMod:4)EVEK2	10962.2		
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	SNGVQLLQR	SNGVQLLQR	2	SNGVQLLQR2	18156	13629.4	22928
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	SNGYEEAYSVFK	SNGYEEAYSVFK	2	SNGYEEAYSVFK2	12795.6	11496.7	6547.26
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	SNHAEAAQCLVHSAALVAEYLSMLEDRK	SNHAEAAQC(UniMod:4)LVHSAALVAEYLSMLEDRK	4	SNHAEAAQC(UniMod:4)LVHSAALVAEYLSMLEDRK4	8054.17	15685.1	10084
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	SNHALSEVEAESDSFMNAVLWLHTHLGS	SNHALSEVEAESDSFMNAVLWLHTHLGS	4	SNHALSEVEAESDSFMNAVLWLHTHLGS4	3714.88	5458.23	2298.03
P97544	P97544	PLPP3_RAT	Plpp3	Phospholipid phosphatase 3	1	SNHHNMV	SNHHNMV	2	SNHHNMV2			980.227
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	SNHLLLATGSNDSFLK	SNHLLLATGSNDSFLK	3	SNHLLLATGSNDSFLK3	7498.74	5164.64	3511.88
F1M4U0	F1M4U0	F1M4U0_RAT	Ccnyl1	Cyclin Y-like 1	1	SNHLNHVSPGQLTK	SNHLNHVSPGQLTK	3	SNHLNHVSPGQLTK3	6507.93	3156.74	
A0A8I6AE91	A0A8I6AE91	A0A8I6AE91_RAT	Gga2	Golgi associated, gamma adaptin ear containing, ARF binding protein 2	1	SNHPEDLQAANR	SNHPEDLQAANR	3	SNHPEDLQAANR3		26544.3	25893.4
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	SNIAEIK	SNIAEIK	2	SNIAEIK2		70725.1	
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	SNIAELK	SNIAELK	2	SNIAELK2	61908.1		74749.2
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	SNIAFMGTLVR	SNIAFMGTLVR	2	SNIAFMGTLVR2	123881	122674	116681
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	SNIDIPR	SNIDIPR	2	SNIDIPR2	71232.3	88316.2	88965.6
Q66HC1	Q66HC1	TDRD3_RAT	Tdrd3	Tudor domain-containing protein 3	1	SNIGAEGGPPPFLPFGQK	SNIGAEGGPPPFLPFGQK	2	SNIGAEGGPPPFLPFGQK2	5980.75		4373.04
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	SNIGTVYER	SNIGTVYER	2	SNIGTVYER2	16312.1	15079.4	23716.6
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	SNIHDDCQVTNPSTGHLFDLSSLSGK	SNIHDDC(UniMod:4)QVTNPSTGHLFDLSSLSGK	3	SNIHDDC(UniMod:4)QVTNPSTGHLFDLSSLSGK3	2405.23	1727.32	2172.71
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	SNIHDDCQVTNPSTGHLFDLSSLSGK	SNIHDDC(UniMod:4)QVTNPSTGHLFDLSSLSGK	4	SNIHDDC(UniMod:4)QVTNPSTGHLFDLSSLSGK4	26741.8	24036.6	21490.1
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	SNILFGR	SNILFGR	2	SNILFGR2	107636	133549	112140
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	SNILTLMYQCMQDK	SNILTLMYQC(UniMod:4)MQDK	2	SNILTLMYQC(UniMod:4)MQDK2	19227	32643.6	19864.2
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	SNILTLMYQCMQDK	SNILTLMYQC(UniMod:4)MQDK	3	SNILTLMYQC(UniMod:4)MQDK3	7777.73	9621.22	9507.85
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	SNIVTVGDVK	SNIVTVGDVK	2	SNIVTVGDVK2	200220	250064	213137
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	SNIWLAAVTK	SNIWLAAVTK	2	SNIWLAAVTK2	48551.4	35577.3	37992.8
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	SNIWVAGDAACFYDIK	SNIWVAGDAAC(UniMod:4)FYDIK	2	SNIWVAGDAAC(UniMod:4)FYDIK2	49099.6	46295.9	46080.2
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	SNKEVSVTIESSGTVSGTLHVNNGNR	SNKEVSVTIESSGTVSGTLHVNNGNR	3	SNKEVSVTIESSGTVSGTLHVNNGNR3	10871.7	3072.87	6588.4
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	SNKEVSVTIESSGTVSGTLHVNNGNR	SNKEVSVTIESSGTVSGTLHVNNGNR	4	SNKEVSVTIESSGTVSGTLHVNNGNR4	47652.6	42391	39430.5
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	SNLAYDIVQLPTGLTGIK	SNLAYDIVQLPTGLTGIK	2	SNLAYDIVQLPTGLTGIK2	424607	333624	419857
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	SNLAYDIVQLPTGLTGIK	SNLAYDIVQLPTGLTGIK	3	SNLAYDIVQLPTGLTGIK3	81156.3	59337.3	58775.6
Q63317	F7EWC5;Q63317	LY6B_RAT	Ly6b	Lymphocyte antigen 6B	0	SNLCLPGCPK	SNLC(UniMod:4)LPGC(UniMod:4)PK	2	SNLC(UniMod:4)LPGC(UniMod:4)PK2	29723	34465.7	35502.1
A0A8I6ASR0	A0A8I6ASR0	A0A8I6ASR0_RAT	Ly6c	Ly6-C antigen	1	SNLCLPICPK	SNLC(UniMod:4)LPIC(UniMod:4)PK	2	SNLC(UniMod:4)LPIC(UniMod:4)PK2	736193	723808	750556
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	SNLDITVGSR	SNLDITVGSR	2	SNLDITVGSR2	23222.1	29803.1	15996
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	SNLDTEVTTTK	SNLDTEVTTTK	2	SNLDTEVTTTK2	25466.5	21152.6	26985.3
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	SNLEDILSYPK	SNLEDILSYPK	2	SNLEDILSYPK2	6.39862e+06	5.123e+06	4.96486e+06
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	SNLEDILSYPK	SNLEDILSYPK	3	SNLEDILSYPK3	109405	78188.7	75840.6
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	SNLGADAPHQNGECHPNEK	SNLGADAPHQNGEC(UniMod:4)HPNEK	3	SNLGADAPHQNGEC(UniMod:4)HPNEK3	1729.82	4339.76	3517.88
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	SNLGWTPLHLACYFGHK	SNLGWTPLHLAC(UniMod:4)YFGHK	4	SNLGWTPLHLAC(UniMod:4)YFGHK4		5402.14	6403.59
P0C2C0	P0C2C0	RM22_RAT	Mrpl22	Large ribosomal subunit protein uL22m	1	SNLHIAESTSGR	SNLHIAESTSGR	3	SNLHIAESTSGR3	3373.11	3025.74	10469.7
Q5XI97	Q5XI97	AASD1_RAT	Aarsd1	Alanyl-tRNA editing protein Aarsd1	1	SNLIFLAGNR	SNLIFLAGNR	2	SNLIFLAGNR2	22357	31618.5	25588.6
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	SNLIWNFK	SNLIWNFK	2	SNLIWNFK2	28075.6	28126.8	22184.1
Q5U2Y0	Q5U2Y0	WIPI4_RAT	Wdr45	WD repeat domain phosphoinositide-interacting protein 4	1	SNLLALVGGGSSPK	SNLLALVGGGSSPK	2	SNLLALVGGGSSPK2	20653	9735.65	19739.7
P24155	P24155	THOP1_RAT	Thop1	Thimet oligopeptidase	1	SNLLGFR	SNLLGFR	2	SNLLGFR2	17158.8	17350.2	20086.5
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	SNLLVFR	SNLLVFR	2	SNLLVFR2	133057	118698	135699
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	SNLPDNLK	SNLPDNLK	2	SNLPDNLK2	98097	79952.5	85809
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	SNLPDNLKK	SNLPDNLKK	2	SNLPDNLKK2	120031	122190	114369
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	SNLQVSNEPGNR	SNLQVSNEPGNR	2	SNLQVSNEPGNR2	4831.63	6550.25	2943.73
D3ZUL5	D3ZUL5	D3ZUL5_RAT	Myct1	Myc target 1	1	SNLSLASLTFQR	SNLSLASLTFQR	2	SNLSLASLTFQR2	311416	312075	313297
Q7TNZ6	Q7TNZ6	STRAA_RAT	Strada	STE20-related kinase adapter protein alpha	1	SNLSMISHGQR	SNLSMISHGQR	3	SNLSMISHGQR3	14606	11821.6	23159.9
A0A8I6GAE6	A0A8I6GAE6	A0A8I6GAE6_RAT	Ddx19b	RNA helicase	1	SNLVDNTNQVEVLQR	SNLVDNTNQVEVLQR	2	SNLVDNTNQVEVLQR2	5926.3	8918.45	6432.85
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	SNLVPVQVCEMLSKPR	SNLVPVQVC(UniMod:4)EMLSKPR	2	SNLVPVQVC(UniMod:4)EMLSKPR2	10988.9	8148.12	5806.44
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	SNLVPVQVCEMLSKPR	SNLVPVQVC(UniMod:4)EMLSKPR	3	SNLVPVQVC(UniMod:4)EMLSKPR3	50949.6	47898.9	51098.3
Q9Z2V2	Q9Z2V2	CD40L_RAT	Cd40lg	CD40 ligand	1	SNLVVLENGR	SNLVVLENGR	2	SNLVVLENGR2	11170	5390.52	7625.79
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	SNMATTETTTR	SNMATTETTTR	2	SNMATTETTTR2	2732.07		
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	SNMEDSIVR	SNMEDSIVR	2	SNMEDSIVR2		7622.84	8666.06
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	SNMEIDMTYQLK	SNMEIDMTYQLK	2	SNMEIDMTYQLK2	24193.9	35986	30958.4
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	SNMGGSPKPAVDNIR	SNMGGSPKPAVDNIR	3	SNMGGSPKPAVDNIR3	49694.4	65960.7	55519.7
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	SNMGHPEPASGLAALTK	SNMGHPEPASGLAALTK	2	SNMGHPEPASGLAALTK2	5597.06	3173.88	1310.46
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	SNMGHPEPASGLAALTK	SNMGHPEPASGLAALTK	3	SNMGHPEPASGLAALTK3	26388.6	28446.8	32036.4
P51799	P51799	CLCN7_RAT	Clcn7	H(+)/Cl(-) exchange transporter 7	1	SNMGLVQR	SNMGLVQR	2	SNMGLVQR2	13710.7	10045.6	
B2RZ97	B2RZ97	B2RZ97_RAT	Kcmf1	E3 ubiquitin-protein ligase KCMF1	1	SNMHFTSSSTGGLSSSQSSYSPSSR	SNMHFTSSSTGGLSSSQSSYSPSSR	3	SNMHFTSSSTGGLSSSQSSYSPSSR3	3146.34	5587.19	3156.45
Q4AEG6	Q4AEG6	BMP10_RAT	Bmp10	Bone morphogenetic protein 10	1	SNMIDDSTAR	SNMIDDSTAR	2	SNMIDDSTAR2	22714.6	25651	20302
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	SNNEIILVLQHFDNCVDK	SNNEIILVLQHFDNC(UniMod:4)VDK	3	SNNEIILVLQHFDNC(UniMod:4)VDK3		18171.1	8627.21
A0A8I6ATH0	A0A8I6ATH0	A0A8I6ATH0_RAT	Braf	non-specific serine/threonine protein kinase	1	SNNIFLHEDLTVK	SNNIFLHEDLTVK	3	SNNIFLHEDLTVK3	4019.09	9622.98	
P14056	P14056;P11345	ARAF_RAT	Araf	Serine/threonine-protein kinase A-Raf	0	SNNIFLHEGLTVK	SNNIFLHEGLTVK	3	SNNIFLHEGLTVK3	4750.14	7280.1	6838.83
B2RZB5	B2RZB5	B2RZB5_RAT	Chmp2a	Charged multivesicular body protein 2A	1	SNNSMAQAMK	SNNSMAQAMK	2	SNNSMAQAMK2	26968.7	28219.3	37574.2
Q8VHV7	Q8VHV7	HNRH1_RAT	Hnrnph1	Heterogeneous nuclear ribonucleoprotein H	1	SNNVEMDWVLK	SNNVEMDWVLK	2	SNNVEMDWVLK2	5287.5	4717.54	2629.47
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	SNNVNEFPVLK	SNNVNEFPVLK	2	SNNVNEFPVLK2	14256	9407.64	13758.1
Q5XIJ6	Q5XIJ6	BABA1_RAT	Babam1	BRISC and BRCA1-A complex member 1	1	SNPEGAEDR	SNPEGAEDR	2	SNPEGAEDR2			32125.9
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	SNPELATLFESIQK	SNPELATLFESIQK	2	SNPELATLFESIQK2	15320.2	27769.6	12441
Q62991	Q62991	SCFD1_RAT	Scfd1	Sec1 family domain-containing protein 1	1	SNPETDDYR	SNPETDDYR	2	SNPETDDYR2		41764.1	38568.9
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	SNPGDFTLSVR	SNPGDFTLSVR	2	SNPGDFTLSVR2	186649	186433	201759
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	SNPGHYLGHLIGHEGPGSLLSELK	SNPGHYLGHLIGHEGPGSLLSELK	4	SNPGHYLGHLIGHEGPGSLLSELK4	4359.35	7462.72	6068.74
A0A8I6ADA8	A0A8I6ADA8	A0A8I6ADA8_RAT	Abhd4	Abhydrolase domain containing 4, N-acyl phospholipase B	1	SNPLAVLR	SNPLAVLR	2	SNPLAVLR2	74195.1	70970	73062.9
Q9ES58	Q9ES58	MO2R1_RAT	Cd200r1	Cell surface glycoprotein CD200 receptor 1	1	SNPLYDTVTTTEAHPASQGK	SNPLYDTVTTTEAHPASQGK	3	SNPLYDTVTTTEAHPASQGK3	71143.3	72741.8	60453.4
D3ZDR7	D3ZDR7	D3ZDR7_RAT	Themis2	Thymocyte selection associated family member 2	1	SNPQAQNSVLSMKPK	SNPQAQNSVLSMKPK	3	SNPQAQNSVLSMKPK3	32078.8	18068.9	22184.8
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	SNPSENEEKEAQSQLVK	SNPSENEEKEAQSQLVK	2	SNPSENEEKEAQSQLVK2	1157.32		1166.38
Q9R0T3	Q9R0T3	DNJC3_RAT	Dnajc3	DnaJ homolog subfamily C member 3	1	SNPSENEEKEAQSQLVK	SNPSENEEKEAQSQLVK	3	SNPSENEEKEAQSQLVK3	96440.5	121619	104377
F1LVL6	F1LVL6	F1LVL6_RAT	Crtc3	CREB regulated transcription coactivator 3	1	SNPSIQATLNK	SNPSIQATLNK	2	SNPSIQATLNK2	6351.65	7326.76	
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	SNPSVLQGLLR	SNPSVLQGLLR	2	SNPSVLQGLLR2	21548.1	30569.5	26877.3
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	SNPTDIYPSK	SNPTDIYPSK	2	SNPTDIYPSK2	17378.2	24133	13630.2
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	SNPVHEIQSLDEVTNLDR	SNPVHEIQSLDEVTNLDR	3	SNPVHEIQSLDEVTNLDR3	407931	395583	412854
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	SNQAELLPSK	SNQAELLPSK	2	SNQAELLPSK2	2.30856e+06	2.47857e+06	2.41674e+06
O35815	O35815	ATX3_RAT	Atxn3	Ataxin-3	1	SNQAGNAMSEEDVLR	SNQAGNAMSEEDVLR	2	SNQAGNAMSEEDVLR2	1952.2	4047.34	2625.05
D3ZDK7	D3ZDK7	PGP_RAT	Pgp	Glycerol-3-phosphate phosphatase	1	SNQESDCMFK	SNQESDC(UniMod:4)MFK	2	SNQESDC(UniMod:4)MFK2	2798.42	2125.65	2505.16
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	SNQLFNGHGGHIMPPTQSQFGEMGGK	SNQLFNGHGGHIMPPTQSQFGEMGGK	4	SNQLFNGHGGHIMPPTQSQFGEMGGK4	5151.34	12750.5	10236.6
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	SNQQAVSPK	SNQQAVSPK	2	SNQQAVSPK2			110995
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	SNQQLENDLNLMDIK	SNQQLENDLNLMDIK	2	SNQQLENDLNLMDIK2	12884.4	12838.1	10868.6
F1LZ05	F1LZ05	F1LZ05_RAT	Parp14	Poly [ADP-ribose] polymerase	1	SNQQLQLVPR	SNQQLQLVPR	2	SNQQLQLVPR2	1259.03		3466.06
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	SNQTMGWGEK	SNQTMGWGEK	2	SNQTMGWGEK2	8390.58	14194.2	9109.51
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	SNQVAFQHFQELDEHISYVATK	SNQVAFQHFQELDEHISYVATK	4	SNQVAFQHFQELDEHISYVATK4	9111.2	6883.65	3569.82
Q0Z843	Q0Z843	Q0Z843_RAT	Fig4	FIG4 phosphoinositide 5-phosphatase	1	SNREEAVLQR	SNREEAVLQR	3	SNREEAVLQR3	11941.2	21525.2	10581.8
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	SNSAQLLVEAR	SNSAQLLVEAR	2	SNSAQLLVEAR2	17848.4	22362.7	7126.33
F1LP90	F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	1	SNSAWQIYLQR	SNSAWQIYLQR	2	SNSAWQIYLQR2	2896.1	7555.71	4217.06
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	SNSDNDIALLR	SNSDNDIALLR	2	SNSDNDIALLR2	6.99533e+06	6.79009e+06	7.84687e+06
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	SNSDNDIALLR	SNSDNDIALLR	3	SNSDNDIALLR3	32978.2	35328.4	45585.8
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	SNSLAFIK	SNSLAFIK	1	SNSLAFIK1	3217.9	2615.44	3460.55
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	SNSLAFIK	SNSLAFIK	2	SNSLAFIK2	144279	201731	165182
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	SNSLEDEEGR	SNSLEDEEGR	2	SNSLEDEEGR2	8153.18	6107.17	6121.61
A0A0G2K2B7	A0A0G2K2B7	A0A0G2K2B7_RAT	Wdr20	WD repeat domain 20	1	SNSLPHSAVSNAGSK	SNSLPHSAVSNAGSK	3	SNSLPHSAVSNAGSK3	6738.95	4725.73	5210.85
P20760	P20759;P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	0	SNSMVTLGCLVK	SNSMVTLGC(UniMod:4)LVK	2	SNSMVTLGC(UniMod:4)LVK2	117595	103478	104622
P20760	P20759;P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	0	SNSMVTLGCLVK	SNSMVTLGC(UniMod:4)LVK	3	SNSMVTLGC(UniMod:4)LVK3	11599.3	11542.7	5780.75
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	SNSSFMSR	SNSSFMSR	2	SNSSFMSR2	195522	183245	208283
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	SNSSGLSIGTVVQSSSPGGR	SNSSGLSIGTVVQSSSPGGR	2	SNSSGLSIGTVVQSSSPGGR2	7031.21	10645.2	8922.41
Q710E6	Q710E6	SUCO_RAT	Suco	SUN domain-containing ossification factor	1	SNSYLTISPEENK	SNSYLTISPEENK	2	SNSYLTISPEENK2	2191.3	2882.38	1323.39
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	SNTCVGCNHLVCR	SNTC(UniMod:4)VGC(UniMod:4)NHLVC(UniMod:4)R	2	SNTC(UniMod:4)VGC(UniMod:4)NHLVC(UniMod:4)R2	46525.5	48939.8	52146.8
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	SNTCVGCNHLVCR	SNTC(UniMod:4)VGC(UniMod:4)NHLVC(UniMod:4)R	3	SNTC(UniMod:4)VGC(UniMod:4)NHLVC(UniMod:4)R3	816471	710257	882689
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	SNTGTIPTTK	SNTGTIPTTK	2	SNTGTIPTTK2	122261	100414	84844.2
Q6AY86	Q6AY86	VP26A_RAT	Vps26a	Vacuolar protein sorting-associated protein 26A	1	SNTHEFVNLVK	SNTHEFVNLVK	2	SNTHEFVNLVK2		2767.48	2467.73
Q6AY86	Q6AY86	VP26A_RAT	Vps26a	Vacuolar protein sorting-associated protein 26A	1	SNTHEFVNLVK	SNTHEFVNLVK	3	SNTHEFVNLVK3	20085.6	12646.9	12099
Q498T9	Q498T9	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	1	SNTIQSGPEGSLVK	SNTIQSGPEGSLVK	2	SNTIQSGPEGSLVK2	38883.1	33520.7	34407.8
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	SNTLDITDGR	SNTLDITDGR	2	SNTLDITDGR2	21689.2	14585.5	13652.8
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	SNTLPTSVTVEISDSAPSAPLVK	SNTLPTSVTVEISDSAPSAPLVK	3	SNTLPTSVTVEISDSAPSAPLVK3	30313.8	25567.5	28738.3
D3ZE26	D3ZE26	D3ZE26_RAT	Tmcc2	Transmembrane and coiled-coil domain family 2	1	SNTLYGAPGNLDTLLEELR	SNTLYGAPGNLDTLLEELR	3	SNTLYGAPGNLDTLLEELR3	10212.1	3119.67	5994.55
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	SNTMSSVYSQGFSGDK	SNTMSSVYSQGFSGDK	2	SNTMSSVYSQGFSGDK2	1.87618e+06	1.90766e+06	2.12096e+06
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	SNTMSSVYSQGFSGDK	SNTMSSVYSQGFSGDK	3	SNTMSSVYSQGFSGDK3	170992	192268	235314
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	SNTMSSVYSQGFSGDKR	SNTMSSVYSQGFSGDKR	2	SNTMSSVYSQGFSGDKR2	171149	171025	224237
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	SNTMSSVYSQGFSGDKR	SNTMSSVYSQGFSGDKR	3	SNTMSSVYSQGFSGDKR3	2.36327e+06	2.15285e+06	2.97518e+06
F1MAL5	F1MAL5	F1MAL5_RAT	Irs2	Insulin receptor substrate 2	1	SNTPESIAETPPAR	SNTPESIAETPPAR	2	SNTPESIAETPPAR2	8177.92	7602.85	2766.71
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	SNTPMGDKDDDDDDDADEK	SNTPMGDKDDDDDDDADEK	3	SNTPMGDKDDDDDDDADEK3			11581.8
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	SNTSPEELGPLANQLTSDYGR	SNTSPEELGPLANQLTSDYGR	3	SNTSPEELGPLANQLTSDYGR3	365892	366917	374518
Q5U2M6	Q5U2M6	DCAF8_RAT	Dcaf8	DDB1- and CUL4-associated factor 8	1	SNVFQAK	SNVFQAK	2	SNVFQAK2	18629.8	15908.3	16991.2
D3ZGB8	D3ZGB8	D3ZGB8_RAT	Cilp	Cartilage intermediate layer protein	1	SNVGVALTFNCAER	SNVGVALTFNC(UniMod:4)AER	2	SNVGVALTFNC(UniMod:4)AER2	11154.5	8158.76	7712.56
Q5XHY7	Q5XHY7	STAM2_RAT	Stam2	Signal transducing adapter molecule 2	1	SNVIDDDVEEIKK	SNVIDDDVEEIKK	3	SNVIDDDVEEIKK3	20186.9		10150.3
P0DSP1	P0DSP1	SORL_RAT	Sorl1	Sortilin-related receptor	1	SNVIVALAR	SNVIVALAR	2	SNVIVALAR2	4188.86	3923.34	
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	SNVLLSFDDTPEK	SNVLLSFDDTPEK	2	SNVLLSFDDTPEK2	6054.03	2643.39	5491.17
A0A8I6GK63	A0A8I6GK63	A0A8I6GK63_RAT	Smc4	Structural maintenance of chromosomes protein	1	SNVLSNEMK	SNVLSNEMK	2	SNVLSNEMK2		7008.43	5494.5
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	SNVNFVTEIFR	SNVNFVTEIFR	2	SNVNFVTEIFR2	3962.5	6054.28	8948.44
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	SNVNIGNLR	SNVNIGNLR	2	SNVNIGNLR2	128780	139098	125207
P10716	P10716	CLC4F_RAT	Clec4f	C-type lectin domain family 4 member F	1	SNVQMLQSNLQK	SNVQMLQSNLQK	2	SNVQMLQSNLQK2	7832.24	12513.9	11294.9
Q99NA5	Q99NA5	IDH3A_RAT	Idh3a	Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial	1	SNVTAVHK	SNVTAVHK	1	SNVTAVHK1			1923.19
Q99NA5	Q99NA5	IDH3A_RAT	Idh3a	Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial	1	SNVTAVHK	SNVTAVHK	2	SNVTAVHK2			64213.6
Q6AYU3	Q6AYU3	DNJB6_RAT	Dnajb6	DnaJ homolog subfamily B member 6	1	SNWEDEEQDR	SNWEDEEQDR	2	SNWEDEEQDR2	1870.79	1679.81	6340.18
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	SNYEAMIDR	SNYEAMIDR	2	SNYEAMIDR2	12038.8	15334.4	10413.5
B0BN20	B0BN20	B0BN20_RAT	Tspan6	Tetraspanin	1	SNYENALK	SNYENALK	2	SNYENALK2	12151.7	7672.27	8584.92
O35346	O35346	FAK1_RAT	Ptk2	Focal adhesion kinase 1	1	SNYEVLEK	SNYEVLEK	2	SNYEVLEK2	10296.9	5391.59	11463.1
P62828	Q8K586;P62828;Q66H11	RAN_RAT	Ran	GTP-binding nuclear protein Ran	0	SNYNFEK	SNYNFEK	2	SNYNFEK2	14427.4	10854.1	5915.75
P62828	P62828	RAN_RAT	Ran	GTP-binding nuclear protein Ran	1	SNYNFEKPFLWLAR	SNYNFEKPFLWLAR	2	SNYNFEKPFLWLAR2	5984.77	8537.12	8810.68
P62828	P62828	RAN_RAT	Ran	GTP-binding nuclear protein Ran	1	SNYNFEKPFLWLAR	SNYNFEKPFLWLAR	3	SNYNFEKPFLWLAR3	83833.6	81006.3	103073
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	SNYNLEGISVK	SNYNLEGISVK	2	SNYNLEGISVK2	6934.23	7657.96	9194.35
B1WBT4	B1WBT4	B1WBT4_RAT	Srpk2	SRSF protein kinase 2	1	SNYQGLPVR	SNYQGLPVR	2	SNYQGLPVR2	18215.6	15032	18034.7
A0A0G2JWA3	A0A0G2JWA3	A0A0G2JWA3_RAT	Xpo7	Exportin 7	1	SNYQLGELVK	SNYQLGELVK	2	SNYQLGELVK2	9716.88	10384.8	5015.83
D4A758	D4A758	D4A758_RAT	Lrrc8b	Leucine rich repeat containing 8 VRAC subunit B	1	SNYSDIPDVK	SNYSDIPDVK	2	SNYSDIPDVK2	8779.66	8969.84	6590.19
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	SPAAEPEPK	SPAAEPEPK	2	SPAAEPEPK2	15364.6		16907.5
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	SPAALGPR	SPAALGPR	2	SPAALGPR2	7326.04	6427.37	5856.84
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	SPAAPAPSLPPAAAVLPSK	SPAAPAPSLPPAAAVLPSK	2	SPAAPAPSLPPAAAVLPSK2	392366	388323	356300
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	SPAAPAPSLPPAAAVLPSK	SPAAPAPSLPPAAAVLPSK	3	SPAAPAPSLPPAAAVLPSK3	303398	204434	257550
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	SPAAPSPLALR	SPAAPSPLALR	2	SPAAPSPLALR2	232591	225938	230161
A0A8I6AMS6	A0A8I6AMS6	A0A8I6AMS6_RAT	Rangap1	RAN GTPase activating protein 1	1	SPACFTLQELK	SPAC(UniMod:4)FTLQELK	2	SPAC(UniMod:4)FTLQELK2	12346.1	10885.2	6070.75
P58751	P58751	RELN_RAT	Reln	Reelin	1	SPADAGPVGR	SPADAGPVGR	2	SPADAGPVGR2	212190	192288	204469
Q5RKH6	Q5RKH6	OS9_RAT	Os9	Protein OS-9	1	SPADLIR	SPADLIR	2	SPADLIR2	36352.1	32573.4	34504.4
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	SPAEEPLFPAPLLLR	SPAEEPLFPAPLLLR	2	SPAEEPLFPAPLLLR2	13504.3	11232.7	10417.3
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	SPAEPEVVNEIQQNELK	SPAEPEVVNEIQQNELK	2	SPAEPEVVNEIQQNELK2	26841.8	36944.8	24932.1
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	SPAEPEVVNEIQQNELK	SPAEPEVVNEIQQNELK	3	SPAEPEVVNEIQQNELK3	9009.12	18707.1	17225.3
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	SPAFTSR	SPAFTSR	2	SPAFTSR2	61112	84532.5	78263.9
P15650	P15650	ACADL_RAT	Acadl	Long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	SPAHGISLFLVENGMK	SPAHGISLFLVENGMK	3	SPAHGISLFLVENGMK3	76709.5	65471.1	76766.7
Q03346	Q03346	MPPB_RAT	Pmpcb	Mitochondrial-processing peptidase subunit beta	1	SPAIAALGPIER	SPAIAALGPIER	2	SPAIAALGPIER2	22097.4	20950	16730.1
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	SPAISWVNNLEVDSR	SPAISWVNNLEVDSR	2	SPAISWVNNLEVDSR2	103912	102049	85259.1
Q99MI7	Q99MI7	UBA3_RAT	Uba3	NEDD8-activating enzyme E1 catalytic subunit	1	SPAITATLEGK	SPAITATLEGK	2	SPAITATLEGK2	7277.51	7845.04	9948.42
Q5XIN7	Q5XIN7	PMGT1_RAT	Pomgnt1	Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1	1	SPALSSWGDPVLLK	SPALSSWGDPVLLK	2	SPALSSWGDPVLLK2	4096.96	6266.22	6784.71
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	SPAPPMGSSSPQMLIK	SPAPPMGSSSPQMLIK	2	SPAPPMGSSSPQMLIK2	18404.2	25778.8	
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	SPAPVQTATTAPK	SPAPVQTATTAPK	2	SPAPVQTATTAPK2	20813.1	19800.8	10091.2
Q5U1Y4	Q5U1Y4	AKCL2_RAT	Akr1e2	1,5-anhydro-D-fructose reductase	1	SPAQILIR	SPAQILIR	2	SPAQILIR2			40781.8
P51635	P51635	AK1A1_RAT	Akr1a1	Aldo-keto reductase family 1 member A1	1	SPAQILLR	SPAQILLR	2	SPAQILLR2	48886.6	34583.7	
M0R9L0	M0R9L0	M0R9L0_RAT	Naca	Nascent polypeptide associated complex subunit alpha	1	SPASDTYIVFGEAK	SPASDTYIVFGEAK	2	SPASDTYIVFGEAK2	70571	74369.4	78561.8
M0R9L0	M0R9L0	M0R9L0_RAT	Naca	Nascent polypeptide associated complex subunit alpha	1	SPASDTYIVFGEAK	SPASDTYIVFGEAK	3	SPASDTYIVFGEAK3	35377.5	28440.8	20007.7
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	SPASESGSPLLPDYLPAENGGILSSK	SPASESGSPLLPDYLPAENGGILSSK	3	SPASESGSPLLPDYLPAENGGILSSK3	6503.03	3971.46	7312.59
G3V912	G3V912	G3V912_RAT	Tmx4	Thioredoxin-related transmembrane protein 4	1	SPASLTMSGMAGLFSISGK	SPASLTMSGMAGLFSISGK	2	SPASLTMSGMAGLFSISGK2	6333.86	860.26	3844.24
D3ZGB8	D3ZGB8	D3ZGB8_RAT	Cilp	Cartilage intermediate layer protein	1	SPATGTVQGR	SPATGTVQGR	2	SPATGTVQGR2	40631.7		19581
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	SPATNPVSSSGGMSDDDKIR	SPATNPVSSSGGMSDDDKIR	3	SPATNPVSSSGGMSDDDKIR3	9622.57	8756.93	2606.03
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	SPATSPISSNSHR	SPATSPISSNSHR	2	SPATSPISSNSHR2	2378.12		
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	SPATSPISSNSHR	SPATSPISSNSHR	3	SPATSPISSNSHR3	27482.9	25025.7	26650.8
P40190	P40190	IL6RB_RAT	Il6st	Interleukin-6 receptor subunit beta	1	SPATVLTIPGSHFK	SPATVLTIPGSHFK	3	SPATVLTIPGSHFK3	13922.1	11584	5805.23
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	SPAVATVIQR	SPAVATVIQR	2	SPAVATVIQR2	22604	23652.4	13570.4
A0A0G2K7W5	A0A0G2K7W5	A0A0G2K7W5_RAT	Ahsa2	Activator of HSP90 ATPase homolog 2	1	SPAVLEAEK	SPAVLEAEK	2	SPAVLEAEK2	8639		8735.18
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	SPAVLQLQHSK	SPAVLQLQHSK	2	SPAVLQLQHSK2	5953.18	6167.83	7367.34
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	SPAVLQLQHSK	SPAVLQLQHSK	3	SPAVLQLQHSK3	29581.3	27560.3	25878.3
Q9JLU4	Q9JLU4	SHAN3_RAT	Shank3	SH3 and multiple ankyrin repeat domains protein 3	1	SPAWIPVPAR	SPAWIPVPAR	2	SPAWIPVPAR2	22480.1	23167.5	26753.4
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	SPAYTLVWTR	SPAYTLVWTR	2	SPAYTLVWTR2	82045.7	78193.8	82229.6
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	SPCDSGYSYETIEK	SPC(UniMod:4)DSGYSYETIEK	2	SPC(UniMod:4)DSGYSYETIEK2	1464.11		2129.32
A0A8I5ZQ72	A0A8I5ZQ72	A0A8I5ZQ72_RAT	Zc3h12c	Zinc finger CCCH type containing 12C	1	SPCLEPHLLK	SPC(UniMod:4)LEPHLLK	3	SPC(UniMod:4)LEPHLLK3	2717.69	5306.07	5361.94
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	SPCMNGGICEDLGTDFSCHCQPGYTGHR	SPC(UniMod:4)MNGGIC(UniMod:4)EDLGTDFSC(UniMod:4)HC(UniMod:4)QPGYTGHR	4	SPC(UniMod:4)MNGGIC(UniMod:4)EDLGTDFSC(UniMod:4)HC(UniMod:4)QPGYTGHR4	13026.5	12048.6	16912.5
Q5HZW5	Q5HZW5	CD320_RAT	Cd320	CD320 antigen	1	SPCQEGELR	SPC(UniMod:4)QEGELR	2	SPC(UniMod:4)QEGELR2	36863.7	39811.6	39724.1
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	SPCQPNPCHGAAPCR	SPC(UniMod:4)QPNPC(UniMod:4)HGAAPC(UniMod:4)R	3	SPC(UniMod:4)QPNPC(UniMod:4)HGAAPC(UniMod:4)R3	7196.68		17506.3
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	SPCTEILLHGIQK	SPC(UniMod:4)TEILLHGIQK	3	SPC(UniMod:4)TEILLHGIQK3			3954.75
Q8CHI9	Q8CHI9	CHSTF_RAT	Chst15	Carbohydrate sulfotransferase 15	1	SPCWYEEFSGR	SPC(UniMod:4)WYEEFSGR	2	SPC(UniMod:4)WYEEFSGR2	11678.7	15866.1	14763.9
P30839	P30839	AL3A2_RAT	Aldh3a2	Aldehyde dehydrogenase family 3 member A2	1	SPCYIDR	SPC(UniMod:4)YIDR	2	SPC(UniMod:4)YIDR2	12954.5	11385.2	10072.9
P30839	P30839	AL3A2_RAT	Aldh3a2	Aldehyde dehydrogenase family 3 member A2	1	SPCYIDRDCDLDVACR	SPC(UniMod:4)YIDRDC(UniMod:4)DLDVAC(UniMod:4)R	3	SPC(UniMod:4)YIDRDC(UniMod:4)DLDVAC(UniMod:4)R3	12650.1	18489.4	18607.9
A0A8I5YCC4	A0A8I5YCC4	A0A8I5YCC4_RAT	Rcsd1	RCSD domain containing 1	1	SPDANIPEDEVVR	SPDANIPEDEVVR	2	SPDANIPEDEVVR2	9085.79	6246.47	8527.39
Q5RKJ1	Q5RKJ1	MAEA_RAT	Maea	E3 ubiquitin-protein transferase MAEA	1	SPDCPVCSR	SPDC(UniMod:4)PVC(UniMod:4)SR	2	SPDC(UniMod:4)PVC(UniMod:4)SR2	7233.38	3543.35	11910.8
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	SPDDSDLR	SPDDSDLR	2	SPDDSDLR2	84427.9	76503.1	88601
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	SPDELPATGGDGGK	SPDELPATGGDGGK	2	SPDELPATGGDGGK2	413083	236487	353644
Q9R010	Q9R010	CIB1_RAT	Cib1	Calcium and integrin-binding protein 1	1	SPDFASSFK	SPDFASSFK	2	SPDFASSFK2	76961.7	89174	47834.2
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	SPDFTNENPLETR	SPDFTNENPLETR	2	SPDFTNENPLETR2	45918.6	52074.1	51020.4
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	SPDFYEEVK	SPDFYEEVK	2	SPDFYEEVK2	62994	59387.4	57187.6
Q6MG56	Q6MG56	LY66F_RAT	Ly6g6f	Lymphocyte antigen 6 complex locus protein G6f	1	SPDGLSCSALLCSVVPAR	SPDGLSC(UniMod:4)SALLC(UniMod:4)SVVPAR	2	SPDGLSC(UniMod:4)SALLC(UniMod:4)SVVPAR2	481117	447307	472721
Q6MG56	Q6MG56	LY66F_RAT	Ly6g6f	Lymphocyte antigen 6 complex locus protein G6f	1	SPDGLSCSALLCSVVPAR	SPDGLSC(UniMod:4)SALLC(UniMod:4)SVVPAR	3	SPDGLSC(UniMod:4)SALLC(UniMod:4)SVVPAR3	83832.9	93574.2	94614.9
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	SPDGNKSPAPK	SPDGNKSPAPK	2	SPDGNKSPAPK2			3926.21
Q4FZU4	Q4FZU4	ATL4_RAT	Adamtsl4	ADAMTS-like protein 4	1	SPDGWLPLTR	SPDGWLPLTR	2	SPDGWLPLTR2	8000.29	7137.2	5391.66
B2GV39	B2GV39	B2GV39_RAT	Mgat4b	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B	1	SPDGYLQIGSFYK	SPDGYLQIGSFYK	2	SPDGYLQIGSFYK2	1117.75	1841.39	
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	SPDHNGEDNFAR	SPDHNGEDNFAR	2	SPDHNGEDNFAR2	16740.5	8458.77	12823.5
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	SPDHNGEDNFAR	SPDHNGEDNFAR	3	SPDHNGEDNFAR3	82284.9	61904.9	59916.8
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	SPDILSLETR	SPDILSLETR	2	SPDILSLETR2	13975.7	14723.6	22177
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	SPDLGHSTQIPR	SPDLGHSTQIPR	3	SPDLGHSTQIPR3	41881.8	56103.8	33090.7
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	SPDMLAHFR	SPDMLAHFR	2	SPDMLAHFR2	16642.8	18006.3	
Q66H74	Q66H74	GLP3L_RAT	Golph3l	Golgi phosphoprotein 3-like	1	SPDNEDPGDSKDIR	SPDNEDPGDSKDIR	3	SPDNEDPGDSKDIR3		10411.8	7739.71
F1LQ00	F1LQ00	F1LQ00_RAT	Col5a2	Collagen type V alpha 2 chain	1	SPDNKPVWYGLDMNR	SPDNKPVWYGLDMNR	3	SPDNKPVWYGLDMNR3	20787.9	22892.8	25722.1
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	SPDPEMVPQGSPVR	SPDPEMVPQGSPVR	2	SPDPEMVPQGSPVR2	11830.3	14100	13200
Q3B8N7	Q3B8N7	T22D4_RAT	Tsc22d4	TSC22 domain family protein 4	1	SPDPFGAAAAQSLSLAR	SPDPFGAAAAQSLSLAR	2	SPDPFGAAAAQSLSLAR2	75174.1	73407.2	55329.7
Q3B8N7	Q3B8N7	T22D4_RAT	Tsc22d4	TSC22 domain family protein 4	1	SPDPFGAAAAQSLSLAR	SPDPFGAAAAQSLSLAR	3	SPDPFGAAAAQSLSLAR3	12959.2	13113.3	17153.4
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	SPDQFSDMR	SPDQFSDMR	2	SPDQFSDMR2	5981.27	3331.67	3992.57
A0A8I5Y8H6	A0A8I5Y8H6	A0A8I5Y8H6_RAT	Psd3	Pleckstrin and Sec7 domain containing 3	1	SPDRPLSVEVPTEEK	SPDRPLSVEVPTEEK	3	SPDRPLSVEVPTEEK3	9020.71	5458.54	6160.93
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	SPDRTEEVLSPDGSPSK	SPDRTEEVLSPDGSPSK	2	SPDRTEEVLSPDGSPSK2	6382.71	4409.13	5694.91
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	SPDRTEEVLSPDGSPSK	SPDRTEEVLSPDGSPSK	3	SPDRTEEVLSPDGSPSK3	107492	136507	103617
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	SPDSDVAVTLK	SPDSDVAVTLK	2	SPDSDVAVTLK2	7433.22	14905.3	6088.06
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	SPDSDVAVTLKK	SPDSDVAVTLKK	3	SPDSDVAVTLKK3	3030.07	7519.36	6383.49
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	SPDSTANVR	SPDSTANVR	2	SPDSTANVR2	16892.5		16065.7
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	SPDSTSPSYSTR	SPDSTSPSYSTR	2	SPDSTSPSYSTR2	27967.9	29631.8	28176.6
Q5RJK6	Q5RJK6	Q5RJK6_RAT	Inpp1	Inositol polyphosphate-1-phosphatase	1	SPDTGLDLPQLLYHVENK	SPDTGLDLPQLLYHVENK	3	SPDTGLDLPQLLYHVENK3	5273.6	5035.44	2505.52
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	SPDTILQK	SPDTILQK	2	SPDTILQK2	143254	166078	117636
P62716	A0A0G2JYA4;P63331;P62716	PP2AB_RAT	Ppp2cb	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	0	SPDTNYLFMGDYVDR	SPDTNYLFMGDYVDR	2	SPDTNYLFMGDYVDR2	50051.4	45937.1	53082.5
P62716	A0A0G2JYA4;P63331;P62716	PP2AB_RAT	Ppp2cb	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	0	SPDTNYLFMGDYVDR	SPDTNYLFMGDYVDR	3	SPDTNYLFMGDYVDR3		2581.77	2344.51
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	SPDTSAYCYETMEK	SPDTSAYC(UniMod:4)YETMEK	2	SPDTSAYC(UniMod:4)YETMEK2	4860.73	2794.42	5407.33
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	SPDVGLYGVIPECGETYQSDLAEAK	SPDVGLYGVIPEC(UniMod:4)GETYQSDLAEAK	3	SPDVGLYGVIPEC(UniMod:4)GETYQSDLAEAK3	11572	19364.4	10801.5
M0R3X1	M0R3X1	M0R3X1_RAT	Psapl1	Proactivator polypeptide-like 1	1	SPEAAEMCDALEHCQR	SPEAAEMC(UniMod:4)DALEHC(UniMod:4)QR	3	SPEAAEMC(UniMod:4)DALEHC(UniMod:4)QR3	4675.35		5412.81
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	SPECDKETSICTDLDGVALCQCK	SPEC(UniMod:4)DKETSIC(UniMod:4)TDLDGVALC(UniMod:4)QC(UniMod:4)K	3	SPEC(UniMod:4)DKETSIC(UniMod:4)TDLDGVALC(UniMod:4)QC(UniMod:4)K3	21104	24293.6	26448.1
Q9QX79	Q9QX79	FETUB_RAT	Fetub	Fetuin-B	1	SPECPGPEK	SPEC(UniMod:4)PGPEK	2	SPEC(UniMod:4)PGPEK2	406510		495685
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	SPECSTVDGGSTVR	SPEC(UniMod:4)STVDGGSTVR	2	SPEC(UniMod:4)STVDGGSTVR2	35518	23468.3	13160
Q6AYB2	Q6AYB2	Q6AYB2_RAT	Sphk2	Sphingosine kinase 2	1	SPEDTAAYFCIYTYPR	SPEDTAAYFC(UniMod:4)IYTYPR	2	SPEDTAAYFC(UniMod:4)IYTYPR2	2364.01	5126.94	2503.8
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	SPEEDGKDTLQCIAEMLQITK	SPEEDGKDTLQC(UniMod:4)IAEMLQITK	3	SPEEDGKDTLQC(UniMod:4)IAEMLQITK3		18814.3	
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	SPEEGAGPEPSGQSPATDSTR	SPEEGAGPEPSGQSPATDSTR	3	SPEEGAGPEPSGQSPATDSTR3	186999	194026	242998
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	SPEELEK	SPEELEK	2	SPEELEK2	102035	103487	113255
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	SPEELESAVEEMK	SPEELESAVEEMK	2	SPEELESAVEEMK2	63242.1	58003.4	53531.4
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	SPEELESAVEEMK	SPEELESAVEEMK	3	SPEELESAVEEMK3	3937.58	3096.17	6279.3
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	SPEELESAVEEMKR	SPEELESAVEEMKR	3	SPEELESAVEEMKR3	26715.9	34630.2	27752.8
A0A096MK24	A0A096MK24	A0A096MK24_RAT	Morc4	Microrchidia 4	1	SPEGDDLER	SPEGDDLER	2	SPEGDDLER2	5048.55	3377.87	5845.62
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	SPEGSREHELDLASEPEVVR	SPEGSREHELDLASEPEVVR	4	SPEGSREHELDLASEPEVVR4	2614.94		3232.22
Q6P7Q1	Q6P7Q1	BABA2_RAT	Babam2	BRISC and BRCA1-A complex member 2	1	SPEIALNR	SPEIALNR	2	SPEIALNR2	20513.2	11998.4	13960.4
P63031	A0A8I5ZRY9;P63031	MPC1_RAT	Mpc1	Mitochondrial pyruvate carrier 1	0	SPEIISGR	SPEIISGR	2	SPEIISGR2	50661.3	31885.3	38124.7
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	SPEKEGVPGVEK	SPEKEGVPGVEK	2	SPEKEGVPGVEK2		2133.59	2797.11
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	SPEKEGVPGVEK	SPEKEGVPGVEK	3	SPEKEGVPGVEK3	51637	66260.6	70790.5
P16310	P16310	GHR_RAT	Ghr	Growth hormone receptor	1	SPELETFSCYWTEGDDHNLK	SPELETFSC(UniMod:4)YWTEGDDHNLK	3	SPELETFSC(UniMod:4)YWTEGDDHNLK3		5707.8	3612.46
A0A0G2K089	A0A0G2K089	A0A0G2K089_RAT	Dennd4c	DENN domain containing 4C	1	SPELFLCYR	SPELFLC(UniMod:4)YR	2	SPELFLC(UniMod:4)YR2	9099.12	17091.8	13275.8
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	SPELLAR	SPELLAR	2	SPELLAR2	136180	143434	140149
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	SPELPVYGAK	SPELPVYGAK	2	SPELPVYGAK2	197664	189993	151829
Q9ER24	Q9ER24	ATX10_RAT	Atxn10	Ataxin-10	1	SPELVEAMYGK	SPELVEAMYGK	2	SPELVEAMYGK2	3252.14	3031.05	4645.06
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	SPEMDKLK	SPEMDKLK	2	SPEMDKLK2	13788.5	14581.9	17980.6
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	SPEMSMQEDCINDIAPMQTDEQANK	SPEMSMQEDC(UniMod:4)INDIAPMQTDEQANK	3	SPEMSMQEDC(UniMod:4)INDIAPMQTDEQANK3	11841.6	13683.9	6395.02
D3Z868	D3Z868	D3Z868_RAT	Tex11	Protein ZIP4 homolog	1	SPEMTER	SPEMTER	2	SPEMTER2	116383	140825	
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	SPEPGPALK	SPEPGPALK	2	SPEPGPALK2	22968.2	17262.3	17053.9
D3Z9Y3	D3Z9Y3	D3Z9Y3_RAT	Cerk	Ceramide kinase	1	SPEPGPSAPDPDAYSVPVSEIIAVEEK	SPEPGPSAPDPDAYSVPVSEIIAVEEK	3	SPEPGPSAPDPDAYSVPVSEIIAVEEK3		3218.55	
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	SPEPISTQSHSIQILFR	SPEPISTQSHSIQILFR	2	SPEPISTQSHSIQILFR2	241190	225946	175249
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	SPEPISTQSHSIQILFR	SPEPISTQSHSIQILFR	3	SPEPISTQSHSIQILFR3	7.81439e+06	8.07588e+06	7.59526e+06
Q5M936	Q5M936	TOR3A_RAT	Tor3a	Torsin-3A	1	SPEQEADEPIPWPSIQR	SPEQEADEPIPWPSIQR	3	SPEQEADEPIPWPSIQR3		9746.98	12449.1
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	SPEQEEPINSGTMGSPEQTGFIR	SPEQEEPINSGTMGSPEQTGFIR	3	SPEQEEPINSGTMGSPEQTGFIR3	6664.66	17854.2	11243.6
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	SPEQIESHEVTNK	SPEQIESHEVTNK	2	SPEQIESHEVTNK2	16354.3	11583.7	11406.5
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	SPEQIESHEVTNK	SPEQIESHEVTNK	3	SPEQIESHEVTNK3	70974.5	52630.1	86640.7
A0A8I5ZLP5	A0A8I5ZLP5	A0A8I5ZLP5_RAT	Iqcb1	IQ motif containing B1	1	SPEQNVPVILLK	SPEQNVPVILLK	2	SPEQNVPVILLK2	2463.16		
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	SPESHLR	SPESHLR	2	SPESHLR2	462.11		8249.36
Q5M936	Q5M936	TOR3A_RAT	Tor3a	Torsin-3A	1	SPETHGAELPR	SPETHGAELPR	2	SPETHGAELPR2	4447.92	3313.78	405.813
Q5M936	Q5M936	TOR3A_RAT	Tor3a	Torsin-3A	1	SPETHGAELPR	SPETHGAELPR	3	SPETHGAELPR3	29744.2	22577.6	30677.6
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	SPETLPR	SPETLPR	2	SPETLPR2	51636	39871.2	37503
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	SPEYESLGFELTVER	SPEYESLGFELTVER	2	SPEYESLGFELTVER2		1973.23	
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	SPEYLSLFIDDK	SPEYLSLFIDDK	2	SPEYLSLFIDDK2	3563.08	7482.22	1492.87
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	SPEYLSLFIDDKLK	SPEYLSLFIDDKLK	3	SPEYLSLFIDDKLK3	2508.16	4495.73	
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	SPEYPDGR	SPEYPDGR	2	SPEYPDGR2	10880.1	7266.66	7412.28
D3ZM19	D3ZM19	D3ZM19_RAT	Evi2b	Ecotropic viral integration site 2B	1	SPFADGETPEMCMDNIR	SPFADGETPEMC(UniMod:4)MDNIR	3	SPFADGETPEMC(UniMod:4)MDNIR3	141207	139657	149767
D3ZM19	D3ZM19	D3ZM19_RAT	Evi2b	Ecotropic viral integration site 2B	1	SPFADGETPEMCMDNIRESEVSTK	SPFADGETPEMC(UniMod:4)MDNIRESEVSTK	3	SPFADGETPEMC(UniMod:4)MDNIRESEVSTK3	5457.27	1061.01	3696.12
D3ZQI6	D3ZQI6	D3ZQI6_RAT	Xpo4	Exportin 4	1	SPFAVCR	SPFAVC(UniMod:4)R	2	SPFAVC(UniMod:4)R2	15296.1	30532.6	19844.3
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	SPFAYCMMIR	SPFAYC(UniMod:4)MMIR	2	SPFAYC(UniMod:4)MMIR2	45711.2	63146.6	45205.9
Q810F4	Q810F4	FAM3C_RAT	Fam3c	Protein FAM3C	1	SPFEQHIK	SPFEQHIK	2	SPFEQHIK2	15710.1	11099.9	16904.9
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	SPFEVQVGPEAGMQK	SPFEVQVGPEAGMQK	2	SPFEVQVGPEAGMQK2	3973.31	3850.24	4826.08
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	SPFEVYVDK	SPFEVYVDK	2	SPFEVYVDK2	5.17859e+06	5.75623e+06	6.06871e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	SPFEVYVDKSQGDASK	SPFEVYVDKSQGDASK	2	SPFEVYVDKSQGDASK2	1993.75	964.366	595.096
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	SPFEVYVDKSQGDASK	SPFEVYVDKSQGDASK	3	SPFEVYVDKSQGDASK3	19943.3	23156	23811.4
F7F785	F7F785	F7F785_RAT	Tspan32	Tetraspanin	1	SPFGLLASTGPIMCQGQK	SPFGLLASTGPIMC(UniMod:4)QGQK	3	SPFGLLASTGPIMC(UniMod:4)QGQK3	3675.9	7842.41	4827.67
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	SPFGVQIGEACNPNACR	SPFGVQIGEAC(UniMod:4)NPNAC(UniMod:4)R	2	SPFGVQIGEAC(UniMod:4)NPNAC(UniMod:4)R2	4618.6		4902.55
Q4QQW8	Q4QQW8	PLBL2_RAT	Plbd2	Putative phospholipase B-like 2	1	SPFHNMLHMGQPDLWMFSPVK	SPFHNMLHMGQPDLWMFSPVK	4	SPFHNMLHMGQPDLWMFSPVK4	3878.24	10892.2	6105.49
O08775	O08775	VGFR2_RAT	Kdr	Vascular endothelial growth factor receptor 2	1	SPFIASVSDEHGIVYITENK	SPFIASVSDEHGIVYITENK	3	SPFIASVSDEHGIVYITENK3	12832	11117.6	20035.5
E9PU02	E9PU02	E9PU02_RAT	Trappc9	Trafficking protein particle complex subunit 9	1	SPFIYSPIIAHNR	SPFIYSPIIAHNR	3	SPFIYSPIIAHNR3	4386.74	8299.78	8106.79
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	SPFLKPK	SPFLKPK	2	SPFLKPK2	65214.4	57161.9	68076.4
B5DFC3	B5DFC3;D3ZCT7	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	0	SPFLQVFNNSPDESSYYR	SPFLQVFNNSPDESSYYR	3	SPFLQVFNNSPDESSYYR3	15049.8	11873.2	10682.9
D3ZHA0	D3ZHA0	FLNC_RAT	Flnc	Filamin-C	1	SPFPVHVAEACNPNACR	SPFPVHVAEAC(UniMod:4)NPNAC(UniMod:4)R	3	SPFPVHVAEAC(UniMod:4)NPNAC(UniMod:4)R3		4307.31	
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	SPFSVGVSPSLDLSK	SPFSVGVSPSLDLSK	2	SPFSVGVSPSLDLSK2	4.13826e+06	4.44455e+06	4.46068e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	SPFSVGVSPSLDLSK	SPFSVGVSPSLDLSK	3	SPFSVGVSPSLDLSK3	77355.2	77248	67857.2
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	SPFTVGVAAPLDLSK	SPFTVGVAAPLDLSK	2	SPFTVGVAAPLDLSK2	19688.1	18978.8	10538
P48548	P48548	KCNJ5_RAT	Kcnj5	G protein-activated inward rectifier potassium channel 4	1	SPFWEMSR	SPFWEMSR	2	SPFWEMSR2	65057.3	69819.6	75172.5
Q4KLZ6	Q4KLZ6	TKFC_RAT	Tkfc	Triokinase/FMN cyclase	1	SPGASLLPVLTK	SPGASLLPVLTK	2	SPGASLLPVLTK2	7641.05	7581.4	10847.7
D4A6D9	D4A6D9	D4A6D9_RAT	Hs1bp3	HCLS1 binding protein 3	1	SPGATGFATR	SPGATGFATR	2	SPGATGFATR2	14202.2	14148.5	11605.9
B1WBN7	B1WBN7	B1WBN7_RAT	Fam20c	FAM20C	1	SPGEPGCSCAQPAAEAAGPGWAQAR	SPGEPGC(UniMod:4)SC(UniMod:4)AQPAAEAAGPGWAQAR	3	SPGEPGC(UniMod:4)SC(UniMod:4)AQPAAEAAGPGWAQAR3	2552.89	2776.97	
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	SPGETSKPRPFAGGGYR	SPGETSKPRPFAGGGYR	4	SPGETSKPRPFAGGGYR4	20390.5	25883.7	25237.8
D3ZF26	D3ZF26	D3ZF26_RAT	Tnks1bp1	Tankyrase 1 binding protein 1	1	SPGGDPGLGK	SPGGDPGLGK	2	SPGGDPGLGK2	8048.22	7241.97	9902.8
D3Z9Y3	D3Z9Y3	D3Z9Y3_RAT	Cerk	Ceramide kinase	1	SPGGLSPFAHLGDGSSDLILIR	SPGGLSPFAHLGDGSSDLILIR	3	SPGGLSPFAHLGDGSSDLILIR3	3876.87		4317.21
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	SPGGPGPLTLK	SPGGPGPLTLK	2	SPGGPGPLTLK2	1.50585e+06	1.40387e+06	1.45085e+06
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	SPGLLQQAK	SPGLLQQAK	2	SPGLLQQAK2	14353.5	7535.31	13653.7
Q66H54	Q66H54	FHI1B_RAT	Fhip1b	FHF complex subunit HOOK-interacting protein 1B	1	SPGLTASPTSSPGR	SPGLTASPTSSPGR	2	SPGLTASPTSSPGR2	4116.99	8784.8	5198.99
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	SPGQTIGGTVTYK	SPGQTIGGTVTYK	2	SPGQTIGGTVTYK2	986180	1.03565e+06	1.0874e+06
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	SPGQTIGGTVTYK	SPGQTIGGTVTYK	3	SPGQTIGGTVTYK3	39423.5	45627.8	50724.6
A0A8I5ZKJ3	A0A8I5ZKJ3	A0A8I5ZKJ3_RAT	Ndufa2	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2	1	SPGSQGVR	SPGSQGVR	2	SPGSQGVR2			14842.4
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	SPGSTCKDHETELLSQQK	SPGSTC(UniMod:4)KDHETELLSQQK	4	SPGSTC(UniMod:4)KDHETELLSQQK4	4445.42		
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	SPGSVAVSNGVTK	SPGSVAVSNGVTK	2	SPGSVAVSNGVTK2	3780.8	4848.3	2626.67
Q6AXS4	Q6AXS4	RENR_RAT	Atp6ap2	Renin receptor	1	SPGSVVFR	SPGSVVFR	2	SPGSVVFR2	17842.7	21416.1	18868.7
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	SPGTPAGEGSGSPPK	SPGTPAGEGSGSPPK	2	SPGTPAGEGSGSPPK2	131708	128887	115834
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	SPGTWTIYFEGADYESHLMR	SPGTWTIYFEGADYESHLMR	3	SPGTWTIYFEGADYESHLMR3	3476.68	4304.97	
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	SPGVAAAQPK	SPGVAAAQPK	2	SPGVAAAQPK2	65834	67718.9	68615
Q9QX79	Q9QX79	FETUB_RAT	Fetub	Fetuin-B	1	SPGVPPQR	SPGVPPQR	2	SPGVPPQR2	491065	406492	417509
Q641X7	Q641X7	FBX25_RAT	Fbxo25	F-box only protein 25	1	SPGWSWIK	SPGWSWIK	2	SPGWSWIK2	12781.8	16243.6	11821.1
D3ZHQ1	D3ZHQ1	D3ZHQ1_RAT	Dpp8	Dipeptidylpeptidase 8	1	SPHCVSLYK	SPHC(UniMod:4)VSLYK	2	SPHC(UniMod:4)VSLYK2		8812.81	8768.27
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	SPHFATLNPQR	SPHFATLNPQR	3	SPHFATLNPQR3	28094.9	24873.7	23685
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	SPHFQVVNEETPK	SPHFQVVNEETPK	3	SPHFQVVNEETPK3	10952.6	6785.22	12053
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	SPHFQVVNEETPKDK	SPHFQVVNEETPKDK	2	SPHFQVVNEETPKDK2		1487.18	803.167
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	SPHFQVVNEETPKDK	SPHFQVVNEETPKDK	3	SPHFQVVNEETPKDK3	32488.4	34462.2	21732.8
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	SPHFQVVNEETPKDK	SPHFQVVNEETPKDK	4	SPHFQVVNEETPKDK4	72494.3	105929	85591.3
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	SPHGLELER	SPHGLELER	2	SPHGLELER2	87448.9	104171	82049.9
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	SPHLLSYEPDISLR	SPHLLSYEPDISLR	2	SPHLLSYEPDISLR2	15831.2	20400.3	12268.3
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	SPHLLSYEPDISLR	SPHLLSYEPDISLR	3	SPHLLSYEPDISLR3	133794	120494	139592
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	SPHLLSYEPDISLRDK	SPHLLSYEPDISLRDK	3	SPHLLSYEPDISLRDK3	4507.89	5064.14	1298.91
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	SPHLLSYEPDISLRDK	SPHLLSYEPDISLRDK	4	SPHLLSYEPDISLRDK4	5926.56	4796.42	9064.3
P14630	P14630	APOM_RAT	Apom	Apolipoprotein M	1	SPHPPEECVEEFQSLTSCLDFK	SPHPPEEC(UniMod:4)VEEFQSLTSC(UniMod:4)LDFK	3	SPHPPEEC(UniMod:4)VEEFQSLTSC(UniMod:4)LDFK3	2.72463e+06	3.07294e+06	3.1933e+06
P14630	P14630	APOM_RAT	Apom	Apolipoprotein M	1	SPHPPEECVEEFQSLTSCLDFK	SPHPPEEC(UniMod:4)VEEFQSLTSC(UniMod:4)LDFK	4	SPHPPEEC(UniMod:4)VEEFQSLTSC(UniMod:4)LDFK4	24505.4	37617.4	26298.4
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	SPHVFYR	SPHVFYR	2	SPHVFYR2	66997	59655.1	48323.4
P41498	A0A8I6G7Q4;P41498	PPAC_RAT	Acp1	Low molecular weight phosphotyrosine protein phosphatase	0	SPIAEAVFR	SPIAEAVFR	2	SPIAEAVFR2	39728.1	33644.5	40207.4
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	SPIEHTGQSSTWPTTSGSTK	SPIEHTGQSSTWPTTSGSTK	3	SPIEHTGQSSTWPTTSGSTK3	7.8899e+06	6.07522e+06	5.37448e+06
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	SPIGGMAGMK	SPIGGMAGMK	2	SPIGGMAGMK2	29447.4	22545.6	20833.1
Q6AYB5	Q6AYB5	SRP54_RAT	Srp54	Signal recognition particle subunit SRP54	1	SPIIFIGTGEHIDDFEPFK	SPIIFIGTGEHIDDFEPFK	3	SPIIFIGTGEHIDDFEPFK3	10826.4	6569.35	5737.03
D4ADE8	D4ADE8;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	SPILVATAVAAR	SPILVATAVAAR	2	SPILVATAVAAR2	59854.9	63965	69987.1
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	SPINVESLLDGLNSLVLDLDFPALRK	SPINVESLLDGLNSLVLDLDFPALRK	3	SPINVESLLDGLNSLVLDLDFPALRK3		3046.36	3951.65
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	SPIPAQPYPSSLEK	SPIPAQPYPSSLEK	2	SPIPAQPYPSSLEK2	14866.1	18496.7	13888
P50745	P50745	SH2B3_RAT	Sh2b3	SH2B adapter protein 3	1	SPIPLECGAACDVR	SPIPLEC(UniMod:4)GAAC(UniMod:4)DVR	2	SPIPLEC(UniMod:4)GAAC(UniMod:4)DVR2	3636.33	6380.04	1871.29
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	SPISFLSK	SPISFLSK	2	SPISFLSK2	16180.4	7829.07	21770.4
M0R5K1	M0R5K1	M0R5K1_RAT	AABR07065812.2	Immunoglobulin heavy variable V12-3	1	SPISITR	SPISITR	2	SPISITR2	699566	663241	683016
F7F0H6	F7F0H6	F7F0H6_RAT	Ifgga2l1	Similar to interferon-inducible GTPase	1	SPIVFKPTDEETIHER	SPIVFKPTDEETIHER	3	SPIVFKPTDEETIHER3	10358.3	9469.71	3218.25
F7F0H6	F7F0H6	F7F0H6_RAT	Ifgga2l1	Similar to interferon-inducible GTPase	1	SPIVFKPTDEETIHER	SPIVFKPTDEETIHER	4	SPIVFKPTDEETIHER4	29625.5	25467.3	31400.3
D3ZWG9	D3ZWG9	D3ZWG9_RAT	Ptar1	Protein prenyltransferase alpha subunit repeat containing 1	1	SPIVLVENK	SPIVLVENK	2	SPIVLVENK2	6134.99	10250.5	4564.44
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	SPKPGPAPHDQELGFFLETGLQR	SPKPGPAPHDQELGFFLETGLQR	4	SPKPGPAPHDQELGFFLETGLQR4	10668.7	9835.21	12383
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	SPKPLLTGLMWAQQGATPGTPPK	SPKPLLTGLMWAQQGATPGTPPK	3	SPKPLLTGLMWAQQGATPGTPPK3	11489.8	7428.54	10655.7
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	SPKPLSPSLR	SPKPLSPSLR	2	SPKPLSPSLR2	16936.3	16148.3	23001.2
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	SPKPLSPSLRK	SPKPLSPSLRK	3	SPKPLSPSLRK3	2138.89	4726.5	3047.54
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	SPKPVVAAISGSCLGGGLELAIACQYR	SPKPVVAAISGSC(UniMod:4)LGGGLELAIAC(UniMod:4)QYR	3	SPKPVVAAISGSC(UniMod:4)LGGGLELAIAC(UniMod:4)QYR3	34302.2	28303.9	38810.8
D4A0G9	D4A0G9	D4A0G9_RAT	Ercc6l	ERCC excision repair 6 like, spindle assembly checkpoint helicase	1	SPLAELGVLK	SPLAELGVLK	2	SPLAELGVLK2	12550	4767.86	4918.01
Q9WVC0	Q9WVC0	SEPT7_RAT	Septin7	Septin-7	1	SPLAQMEEERR	SPLAQMEEERR	3	SPLAQMEEERR3	327568	223839	299265
P14270	P14270	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	1	SPLDPMTSPGSGLILQANFVHSQR	SPLDPMTSPGSGLILQANFVHSQR	3	SPLDPMTSPGSGLILQANFVHSQR3	64194.6	63547.3	72599.1
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	SPLDSTTEPPAVR	SPLDSTTEPPAVR	2	SPLDSTTEPPAVR2	14301.8	19649.9	18088.5
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	SPLEPESPGWPGFGDTTTAK	SPLEPESPGWPGFGDTTTAK	3	SPLEPESPGWPGFGDTTTAK3	21891.5	41632.4	25640
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	SPLEPVCEDGPFGPVQEEK	SPLEPVC(UniMod:4)EDGPFGPVQEEK	3	SPLEPVC(UniMod:4)EDGPFGPVQEEK3	5570.31	5073.25	5175.33
P51111	P51111	HD_RAT	Htt	Huntingtin	1	SPLFEAAR	SPLFEAAR	2	SPLFEAAR2	93347.3	132926	96145
Q99M64	Q99M64	P4K2A_RAT	Pi4k2a	Phosphatidylinositol 4-kinase type 2-alpha	1	SPLHLVQMPPVIVETAR	SPLHLVQMPPVIVETAR	3	SPLHLVQMPPVIVETAR3	4424.93	4045.24	6897.11
Q66H72	Q66H72	Q66H72_RAT	Slc37a1	Solute carrier family 37 (Glycerol-3-phosphate transporter), member 1	1	SPLHPSHIVVLPGDR	SPLHPSHIVVLPGDR	4	SPLHPSHIVVLPGDR4	9306.76	10746	6056.31
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	SPLIESTANMENNQPQK	SPLIESTANMENNQPQK	2	SPLIESTANMENNQPQK2	8920.45	6966.79	7424.45
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	SPLIIFADCDLNK	SPLIIFADC(UniMod:4)DLNK	2	SPLIIFADC(UniMod:4)DLNK2	8242.33	11979.7	11150.2
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	SPLIIFSDCNMK	SPLIIFSDC(UniMod:4)NMK	2	SPLIIFSDC(UniMod:4)NMK2	85897.1	95656.9	87940.2
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	SPLITAWPEELISK	SPLITAWPEELISK	2	SPLITAWPEELISK2	8290.47	8221.14	6290.37
Q4FZU0	Q4FZU0	Q4FZU0_RAT	Acp6	Acid phosphatase 6, lysophosphatidic	1	SPLKPLPLEDQVEWNPK	SPLKPLPLEDQVEWNPK	3	SPLKPLPLEDQVEWNPK3	8876.39	8994.09	9208.1
Q5RJR2	Q5RJR2;A0A8I6GGS8	TWF1_RAT	Twf1	Twinfilin-1	0	SPLLDIVER	SPLLDIVER	2	SPLLDIVER2	423311	223326	268737
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	SPLLQLPHIEEDNLR	SPLLQLPHIEEDNLR	3	SPLLQLPHIEEDNLR3	6957.34	14752.6	9474
Q4V888	Q4V888	PP4P2_RAT	Pip4p2	Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase	1	SPLLSASHSGNVTPTAPPYLQESSPR	SPLLSASHSGNVTPTAPPYLQESSPR	3	SPLLSASHSGNVTPTAPPYLQESSPR3	9676.45	12300.3	12227.8
B2RYI0	B2RYI0	WDR91_RAT	Wdr91	WD repeat-containing protein 91	1	SPLLSLEWATK	SPLLSLEWATK	2	SPLLSLEWATK2	9783.99	7478.27	5160.41
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	SPLLTFPSK	SPLLTFPSK	2	SPLLTFPSK2	8830.13	12111.8	12720.8
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	SPLLTFPSKEPLR	SPLLTFPSKEPLR	3	SPLLTFPSKEPLR3	33148.5	35764.6	25767.3
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	SPLMSEFQSQISSNPELAAIFESIQK	SPLMSEFQSQISSNPELAAIFESIQK	3	SPLMSEFQSQISSNPELAAIFESIQK3	24752.5	18322.6	14009.4
F7FMS0	F7FMS0	F7FMS0_RAT	Mst1	Macrophage stimulating 1	1	SPLNDFQLLR	SPLNDFQLLR	2	SPLNDFQLLR2	19711.9	12426.6	17178.1
G3V8Z6	G3V8Z6	G3V8Z6_RAT	Krit1	KRIT1, ankyrin repeat containing	1	SPLNVCEENK	SPLNVC(UniMod:4)EENK	2	SPLNVC(UniMod:4)EENK2	9013.84	14665.5	8230.09
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	SPLPPEPAR	SPLPPEPAR	2	SPLPPEPAR2	20773.9	15450.9	
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	SPLPQEPPR	SPLPQEPPR	2	SPLPQEPPR2	7.26575e+07	4.85704e+07	4.85192e+07
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	SPLPQEPPRK	SPLPQEPPRK	2	SPLPQEPPRK2	3.38338e+06	2.12977e+06	1.93481e+06
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	SPLPQEPPRK	SPLPQEPPRK	3	SPLPQEPPRK3	2.85926e+07	2.28645e+07	2.19033e+07
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	SPLPQEPPRKDPPPK	SPLPQEPPRKDPPPK	2	SPLPQEPPRKDPPPK2	131506	64036.1	61253.3
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	SPLPQEPPRKDPPPK	SPLPQEPPRKDPPPK	3	SPLPQEPPRKDPPPK3	2.61237e+06	1.50109e+06	1.41553e+06
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	SPLPQEPPRKDPPPK	SPLPQEPPRKDPPPK	4	SPLPQEPPRKDPPPK4	4.57612e+06	3.24635e+06	3.56508e+06
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	SPLQSLACSK	SPLQSLAC(UniMod:4)SK	2	SPLQSLAC(UniMod:4)SK2	12874.6		2051.66
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	SPLQSLACSKPSPHLSAETPIPALPEFPR	SPLQSLAC(UniMod:4)SKPSPHLSAETPIPALPEFPR	4	SPLQSLAC(UniMod:4)SKPSPHLSAETPIPALPEFPR4	13374.9	20556.9	27740.5
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	SPLSAEELMAIEDEGILDK	SPLSAEELMAIEDEGILDK	3	SPLSAEELMAIEDEGILDK3	17943.6	20852.7	17223.3
G3V6W5	G3V6W5	G3V6W5_RAT	Ifih1	RNA helicase	1	SPLSDFGTQHYEQWAIQMEK	SPLSDFGTQHYEQWAIQMEK	3	SPLSDFGTQHYEQWAIQMEK3	5173.19	9401.84	8327.99
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	SPLSGIPVR	SPLSGIPVR	2	SPLSGIPVR2	48387.8	49216.9	61246.1
Q6XUX2	Q6XUX2	DUSTY_RAT	Dstyk	Dual serine/threonine and tyrosine protein kinase	1	SPLSGQLMDLGYLSSSHR	SPLSGQLMDLGYLSSSHR	3	SPLSGQLMDLGYLSSSHR3	4558.73	2751.85	6105.89
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	SPLSVFK	SPLSVFK	2	SPLSVFK2	72931.4	76433.3	64368.3
Q63433	Q63433	PKN1_RAT	Pkn1	Serine/threonine-protein kinase N1	1	SPLTLEDFK	SPLTLEDFK	2	SPLTLEDFK2	11205.7	16239	5410.95
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	SPLTMDQIRPNTELK	SPLTMDQIRPNTELK	3	SPLTMDQIRPNTELK3	203275	243362	202068
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	SPLTPEK	SPLTPEK	2	SPLTPEK2	22618.4	28900.3	41421.6
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	SPLTPEKEAGYTEFTGPPQKPPR	SPLTPEKEAGYTEFTGPPQKPPR	4	SPLTPEKEAGYTEFTGPPQKPPR4	2014.64	5210.45	
D4A4T0	D4A4T0	D4A4T0_RAT	Stub1	STIP1 homology and U-box containing protein 1	1	SPLTQEQLIPNLAMK	SPLTQEQLIPNLAMK	2	SPLTQEQLIPNLAMK2	5192.57	4470.89	6002.34
D4A4T0	D4A4T0	D4A4T0_RAT	Stub1	STIP1 homology and U-box containing protein 1	1	SPLTQEQLIPNLAMK	SPLTQEQLIPNLAMK	3	SPLTQEQLIPNLAMK3	16805.4	12452	8389.65
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	SPLVAAMQHFLPVLK	SPLVAAMQHFLPVLK	2	SPLVAAMQHFLPVLK2	4029.2	4714.31	5484.58
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	SPLVAAMQHFLPVLK	SPLVAAMQHFLPVLK	3	SPLVAAMQHFLPVLK3	82365.1	80419	68448.9
Q63189	Q63189	PRG2_RAT	Prg2	Bone marrow proteoglycan	1	SPLVDESLPR	SPLVDESLPR	2	SPLVDESLPR2	18393.7	10871.7	17614.2
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	SPLVLAYDQAHFSALVSMEQK	SPLVLAYDQAHFSALVSMEQK	3	SPLVLAYDQAHFSALVSMEQK3	23387.6	25460.2	25173.5
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	SPLVMDVLNIQGVQR	SPLVMDVLNIQGVQR	2	SPLVMDVLNIQGVQR2	132571	145362	144482
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	SPLVMDVLNIQGVQR	SPLVMDVLNIQGVQR	3	SPLVMDVLNIQGVQR3	89943.7	93858.8	84037.5
O08773	O08773	RGS14_RAT	Rgs14	Regulator of G-protein signaling 14	1	SPLYQECLLAEAEGR	SPLYQEC(UniMod:4)LLAEAEGR	2	SPLYQEC(UniMod:4)LLAEAEGR2			2669.58
P14270	P14270	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	1	SPMCNQPSINK	SPMC(UniMod:4)NQPSINK	2	SPMC(UniMod:4)NQPSINK2	4070.86	2893.02	7043.95
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	SPMEFVEYNK	SPMEFVEYNK	2	SPMEFVEYNK2	54209.5	72626.6	74639.7
Q05701	Q05701	BPIB3_RAT	Bpifb3	BPI fold-containing family B member 3	1	SPMILLQNK	SPMILLQNK	2	SPMILLQNK2	2179.7		3334.66
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	SPMQSPEHINA	SPMQSPEHINA	2	SPMQSPEHINA2	8766.54	4200.7	1846.19
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	SPMSFFER	SPMSFFER	2	SPMSFFER2	62227.4	61038.4	63106
Q704S8	Q704S8	CACP_RAT	Crat	Carnitine O-acetyltransferase	1	SPMVPLPMPK	SPMVPLPMPK	2	SPMVPLPMPK2	23599	15504.2	17181.8
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	SPNDLLALFR	SPNDLLALFR	2	SPNDLLALFR2	83935.3	81783.2	82006.2
D3ZW34	D3ZW34	D3ZW34_RAT	Adamdec1	ADAM-like, decysin 1	1	SPNEDSLQGQK	SPNEDSLQGQK	2	SPNEDSLQGQK2	5098.47	3470.54	2011.86
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	SPNELVDDLFK	SPNELVDDLFK	2	SPNELVDDLFK2	15112.3	10686.9	12433.7
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	SPNLSEIK	SPNLSEIK	2	SPNLSEIK2	14387	6350.52	10626
D3ZHW0	D3ZHW0	D3ZHW0_RAT	Dhx29	ATP-dependent RNA helicase DHX29	1	SPNPSFEK	SPNPSFEK	2	SPNPSFEK2	14360.5	12481.3	11838
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	SPNPSLLHLCGSLAQLACVEPVR	SPNPSLLHLC(UniMod:4)GSLAQLAC(UniMod:4)VEPVR	3	SPNPSLLHLC(UniMod:4)GSLAQLAC(UniMod:4)VEPVR3	6934.95	9709.75	13850.6
D3ZY51	D3ZY51	D3ZY51_RAT	Pkp1	Plakophilin 1	1	SPNQNVQQAAAGALR	SPNQNVQQAAAGALR	2	SPNQNVQQAAAGALR2	6299.45	10106	5229.08
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	SPNSPTVEEFQFPYNR	SPNSPTVEEFQFPYNR	2	SPNSPTVEEFQFPYNR2	587942	756231	687811
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	SPNSPTVEEFQFPYNR	SPNSPTVEEFQFPYNR	3	SPNSPTVEEFQFPYNR3	721777	938444	902818
F1LQ00	F1LQ00	F1LQ00_RAT	Col5a2	Collagen type V alpha 2 chain	1	SPNTAITQMTFLR	SPNTAITQMTFLR	2	SPNTAITQMTFLR2	19488.4	15171.1	15234.8
D3ZRH1	D3ZRH1	D3ZRH1_RAT	Oxa1l	OXA1L, mitochondrial inner membrane protein	1	SPNTPNSSTNSVK	SPNTPNSSTNSVK	2	SPNTPNSSTNSVK2			5230.78
A0A0G2JUU7	A0A0G2JUU7	A0A0G2JUU7_RAT	Tubgcp3	Gamma-tubulin complex component	1	SPNVLLQNLCCR	SPNVLLQNLC(UniMod:4)C(UniMod:4)R	2	SPNVLLQNLC(UniMod:4)C(UniMod:4)R2	6981.26	11729.8	7579.66
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	SPPAVQQDNVDEDLIR	SPPAVQQDNVDEDLIR	2	SPPAVQQDNVDEDLIR2	20859.8	15900.7	12759.9
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	SPPAVQQDNVDEDLIR	SPPAVQQDNVDEDLIR	3	SPPAVQQDNVDEDLIR3	43956	35595.2	32825.1
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	SPPAVQQDNVDEDLIRK	SPPAVQQDNVDEDLIRK	3	SPPAVQQDNVDEDLIRK3	310666	252986	238477
Q6TMG5	Q6TMG5	NEMO_RAT	Ikbkg	NF-kappa-B essential modulator	1	SPPEEPPDFCCPK	SPPEEPPDFC(UniMod:4)C(UniMod:4)PK	2	SPPEEPPDFC(UniMod:4)C(UniMod:4)PK2	4060.91	2108.9	3426.2
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	SPPESLNDLGAFESLR	SPPESLNDLGAFESLR	2	SPPESLNDLGAFESLR2	6180.54	14391.9	15966.1
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	SPPESLNDLGAFESLR	SPPESLNDLGAFESLR	3	SPPESLNDLGAFESLR3	6664.93	7768.4	9292.18
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	SPPEVSEVETDLGAVPDLLR	SPPEVSEVETDLGAVPDLLR	3	SPPEVSEVETDLGAVPDLLR3	13127.1	16269.5	22293.6
D4A0G7	D4A0G7	D4A0G7_RAT	Rab37	RAB37, member RAS oncogene family	1	SPPFSPNYDLTGK	SPPFSPNYDLTGK	2	SPPFSPNYDLTGK2	195740	182937	205482
A9CMA6	A9CMA6	TM163_RAT	Tmem163	Transmembrane protein 163	1	SPPGPGVPRPPPR	SPPGPGVPRPPPR	3	SPPGPGVPRPPPR3	79847.2	67789.1	54757.2
P07943	P07943;A0A8I6A068	ALDR_RAT	Akr1b1	Aldo-keto reductase family 1 member B1	0	SPPGQVTEAVK	SPPGQVTEAVK	2	SPPGQVTEAVK2	29202.3	30648.7	40049.2
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	SPPGSARPQELVGTFIQQEVGK	SPPGSARPQELVGTFIQQEVGK	3	SPPGSARPQELVGTFIQQEVGK3	13403	19142.4	
B2GV94	B2GV94	B2GV94_RAT	Retreg3	Fam134c protein	1	SPPGTGDTQGLPASR	SPPGTGDTQGLPASR	2	SPPGTGDTQGLPASR2	58374.3	51175.9	49209.9
O88422	A0A8I6AU26;O88422	GALT5_RAT	Galnt5	Polypeptide N-acetylgalactosaminyltransferase 5	0	SPPHLIK	SPPHLIK	2	SPPHLIK2	27497.7	18786.6	21641.3
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	SPPIPLAK	SPPIPLAK	1	SPPIPLAK1	3321.62	3508.47	1778.12
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	SPPIPLAK	SPPIPLAK	2	SPPIPLAK2	662185	610728	703867
Q6AYS6	Q6AYS6	SNX17_RAT	Snx17	Sorting nexin-17	1	SPPLLESPDASR	SPPLLESPDASR	2	SPPLLESPDASR2	13972.2	9222.33	15758.4
D3ZQI6	D3ZQI6	D3ZQI6_RAT	Xpo4	Exportin 4	1	SPPLNYLSSPVQR	SPPLNYLSSPVQR	2	SPPLNYLSSPVQR2	5769.97	7704.99	7205.36
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	SPPNAGYLVMVSHGASADGPPSLDPVQR	SPPNAGYLVMVSHGASADGPPSLDPVQR	3	SPPNAGYLVMVSHGASADGPPSLDPVQR3	19469.1	14044.6	16289.6
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	SPPPIQVVEK	SPPPIQVVEK	2	SPPPIQVVEK2	154947	183408	184936
Q5M890	Q5M890	Q5M890_RAT	Apon	Apolipoprotein N	1	SPPPTSSTCR	SPPPTSSTC(UniMod:4)R	2	SPPPTSSTC(UniMod:4)R2			129873
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	SPPQCDADGEFMPVQCK	SPPQC(UniMod:4)DADGEFMPVQC(UniMod:4)K	3	SPPQC(UniMod:4)DADGEFMPVQC(UniMod:4)K3	7784.73	3925.95	5368.06
O88370	O88370	PI42C_RAT	Pip4k2c	Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma	1	SPPSETEGSDGR	SPPSETEGSDGR	2	SPPSETEGSDGR2			10174.9
Q4KLZ1	Q4KLZ1	TM186_RAT	Tmem186	Transmembrane protein 186	1	SPPSQEKPPGTETEK	SPPSQEKPPGTETEK	3	SPPSQEKPPGTETEK3	7795.01		
A0A8I5ZVX1	A0A8I5ZVX1	A0A8I5ZVX1_RAT	Ppfibp2	PPFIA binding protein 2	1	SPPTASLQPDSSGSSQPK	SPPTASLQPDSSGSSQPK	2	SPPTASLQPDSSGSSQPK2	6439.55	6206.2	5293.18
B0BNM1	B0BNM1	NNRE_RAT	Naxe	NAD(P)H-hydrate epimerase	1	SPPTVLVICGPGNNGGDGLVCAR	SPPTVLVIC(UniMod:4)GPGNNGGDGLVC(UniMod:4)AR	3	SPPTVLVIC(UniMod:4)GPGNNGGDGLVC(UniMod:4)AR3	7918.78		12420.2
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	SPPVEFMR	SPPVEFMR	2	SPPVEFMR2	121817	101217	110963
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	SPPVIPVLQEIYK	SPPVIPVLQEIYK	2	SPPVIPVLQEIYK2	6121.72	8008.59	18949.4
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	SPPVIPVLQEIYKGEK	SPPVIPVLQEIYKGEK	3	SPPVIPVLQEIYKGEK3	4414.25		6790.63
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	SPPVMVAGGR	SPPVMVAGGR	2	SPPVMVAGGR2	29562.3	21721.4	33432.4
Q6P9X9	Q6P9X9	PARM1_RAT	Parm1	Prostate androgen-regulated mucin-like protein 1 homolog	1	SPQDTEPGK	SPQDTEPGK	2	SPQDTEPGK2			31894.7
F1MAF8	F1MAF8	F1MAF8_RAT	Atg2b	Autophagy related 2B	1	SPQECCLR	SPQEC(UniMod:4)C(UniMod:4)LR	2	SPQEC(UniMod:4)C(UniMod:4)LR2	2875.5	4923.15	2449.36
A0A8I5ZZR5	A0A8I5ZZR5	A0A8I5ZZR5_RAT	Nbeal1	Neurobeachin-like 1	1	SPQELFK	SPQELFK	2	SPQELFK2	6614.91		5594.31
P18292	P18292	THRB_RAT	F2	Prothrombin	1	SPQELLCGASLISDR	SPQELLC(UniMod:4)GASLISDR	2	SPQELLC(UniMod:4)GASLISDR2	209105	3.00367e+07	3.10429e+07
P18292	P18292	THRB_RAT	F2	Prothrombin	1	SPQELLCGASLISDR	SPQELLC(UniMod:4)GASLISDR	3	SPQELLC(UniMod:4)GASLISDR3	9.00126e+06	8.87356e+06	9.74789e+06
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	SPQEMLR	SPQEMLR	2	SPQEMLR2	290992	346991	285164
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	SPQENLVPCDVLLLR	SPQENLVPC(UniMod:4)DVLLLR	2	SPQENLVPC(UniMod:4)DVLLLR2	30929.5	29475.9	17901
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	SPQENLVPCDVLLLR	SPQENLVPC(UniMod:4)DVLLLR	3	SPQENLVPC(UniMod:4)DVLLLR3	6320.39	4629.87	7889.06
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	SPQETYDVYCYVDHLDGDVFHITAPSK	SPQETYDVYC(UniMod:4)YVDHLDGDVFHITAPSK	4	SPQETYDVYC(UniMod:4)YVDHLDGDVFHITAPSK4	5006.9	10371.4	3469.55
Q64605	Q64605	PTPRS_RAT	Ptprs	Receptor-type tyrosine-protein phosphatase S	1	SPQGLGAFTAVVR	SPQGLGAFTAVVR	2	SPQGLGAFTAVVR2	6377.87	4567.32	3580.8
D3Z841	D3Z841	D3Z841_RAT	Btnl10	Butyrophilin like 10	1	SPQHGLWALEFYK	SPQHGLWALEFYK	3	SPQHGLWALEFYK3	11129.8	12729.1	7919.42
A0A8I6ATH0	A0A8I6ATH0	A0A8I6ATH0_RAT	Braf	non-specific serine/threonine protein kinase	1	SPQKPIVR	SPQKPIVR	2	SPQKPIVR2	23135.2		10214.9
A0A0G2K012	A0A0G2K012	A0A0G2K012_RAT	Ubxn6	UBX domain protein 6	1	SPQLALR	SPQLALR	2	SPQLALR2	15796.7	13208.7	12466.2
A0A8I6ANU1	A0A8I6ANU1	A0A8I6ANU1_RAT	ENSRNOG00000068865	Ig-like domain-containing protein	1	SPQLLIHSATSLADGVPSR	SPQLLIHSATSLADGVPSR	2	SPQLLIHSATSLADGVPSR2	4352.05	2554.99	2797.72
A0A8I6ANU1	A0A8I6ANU1	A0A8I6ANU1_RAT	ENSRNOG00000068865	Ig-like domain-containing protein	1	SPQLLIHSATSLADGVPSR	SPQLLIHSATSLADGVPSR	3	SPQLLIHSATSLADGVPSR3	73113.1	66402.8	75326.2
A0A8I6AQ74	A0A8I6AQ74	A0A8I6AQ74_RAT	ENSRNOG00000064086	Ig-like domain-containing protein	1	SPQLLIYAANR	SPQLLIYAANR	2	SPQLLIYAANR2	74632.1	55428.8	75726.3
A0A8I6AQ74	A0A8I6AQ74	A0A8I6AQ74_RAT	ENSRNOG00000064086	Ig-like domain-containing protein	1	SPQLLIYAANR	SPQLLIYAANR	3	SPQLLIYAANR3	12158.9	9118.16	9358.59
A0A8I6AAJ5	A0A8I6AAJ5	A0A8I6AAJ5_RAT	LOC500180	Ig-like domain-containing protein	1	SPQLLIYAASR	SPQLLIYAASR	2	SPQLLIYAASR2	49278	41053.8	28677.5
A0A8I6AAJ5	A0A8I6AAJ5	A0A8I6AAJ5_RAT	LOC500180	Ig-like domain-containing protein	1	SPQLLIYAASR	SPQLLIYAASR	3	SPQLLIYAASR3	2728.22	1986.76	4160.66
A0A8I6AJI1	A0A8I6AJI1	A0A8I6AJI1_RAT	ENSRNOG00000070109	Ig-like domain-containing protein	1	SPQLLIYDASSLHTGVPSR	SPQLLIYDASSLHTGVPSR	3	SPQLLIYDASSLHTGVPSR3	123372	107544	113688
A0A8I6AUU8	A0A8I6AUU8	A0A8I6AUU8_RAT	ENSRNOG00000070721	Ig-like domain-containing protein	1	SPQLLIYDASSLQDGVPSR	SPQLLIYDASSLQDGVPSR	3	SPQLLIYDASSLQDGVPSR3	141014	110141	82855.8
A0A8I6GD94	A0A8I6GD94	A0A8I6GD94_RAT	Igkvl-ps2	Ig-like domain-containing protein	1	SPQLLIYGASSLQDGVPSR	SPQLLIYGASSLQDGVPSR	3	SPQLLIYGASSLQDGVPSR3	226674	196911	198328
A0A8I5ZQ09;A0A8I5ZV61;A0A8I5ZZK2	A0A8I5ZZK2;A0A8I5ZQ09;A0A8I5ZV61	A0A8I5ZQ09_RAT;A0A8I5ZV61_RAT;A0A8I5ZZK2_RAT	ENSRNOG00000063659;ENSRNOG00000064930;ENSRNOG00000065931	Ig-like domain-containing protein	0	SPQLLIYGATSLADGVPSR	SPQLLIYGATSLADGVPSR	2	SPQLLIYGATSLADGVPSR2	39941.2	27155.6	33569.5
A0A8I5ZQ09;A0A8I5ZV61;A0A8I5ZZK2	A0A8I5ZZK2;A0A8I5ZQ09;A0A8I5ZV61	A0A8I5ZQ09_RAT;A0A8I5ZV61_RAT;A0A8I5ZZK2_RAT	ENSRNOG00000063659;ENSRNOG00000064930;ENSRNOG00000065931	Ig-like domain-containing protein	0	SPQLLIYGATSLADGVPSR	SPQLLIYGATSLADGVPSR	3	SPQLLIYGATSLADGVPSR3	145873	100601	107625
A0A8I6AHV2;F1LZK3	F1LZK3;A0A8I6AHV2	A0A8I6AHV2_RAT;F1LZK3_RAT	ENSRNOG00000062608;ENSRNOG00000063419	Ig-like domain-containing protein	0	SPQLLIYNANSLHTGVPSR	SPQLLIYNANSLHTGVPSR	3	SPQLLIYNANSLHTGVPSR3	365870	287678	297657
A0A8I6AI41	A0A8I6GHG7;A0A8I6AI41	A0A8I6AI41_RAT	ENSRNOG00000066406	Ig-like domain-containing protein	0	SPQLLIYR	SPQLLIYR	2	SPQLLIYR2	239115	193762	209015
A0A8I5Y765	A0A8I5Y765	A0A8I5Y765_RAT	ENSRNOG00000064670	Ig-like domain-containing protein	1	SPQLLIYYANSLNDGVPSR	SPQLLIYYANSLNDGVPSR	3	SPQLLIYYANSLNDGVPSR3	52524.9	38436.6	43952.5
A0A8I6AK42;M0R628	A0A8I6AK42;M0R628	A0A8I6AK42_RAT;M0R628_RAT	ENSRNOG00000068268;ENSRNOG00000071189	Uncharacterized protein	0	SPQLLIYYASSLQDGVPSR	SPQLLIYYASSLQDGVPSR	3	SPQLLIYYASSLQDGVPSR3	72381.9	81440.6	61992.1
O70601	O70601	LAT_RAT	Lat	Linker for activation of T-cells family member 1	1	SPQPLGGSHR	SPQPLGGSHR	2	SPQPLGGSHR2	33666.3	32189.1	23823.3
P56522	P56522	ADRO_RAT	Fdxr	NADPH:adrenodoxin oxidoreductase, mitochondrial	1	SPQQVLPTPDGR	SPQQVLPTPDGR	2	SPQQVLPTPDGR2	7381.39		11255.5
Q10739	Q10739	MMP14_RAT	Mmp14	Matrix metalloproteinase-14	1	SPQSLSAAIAAMQR	SPQSLSAAIAAMQR	2	SPQSLSAAIAAMQR2	3913.82	3443.78	3046.14
Q10739	Q10739	MMP14_RAT	Mmp14	Matrix metalloproteinase-14	1	SPQSLSAAIAAMQR	SPQSLSAAIAAMQR	3	SPQSLSAAIAAMQR3	3052.77	4478.41	3577.43
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	SPQTPELVEALAFR	SPQTPELVEALAFR	2	SPQTPELVEALAFR2	99827.1	101662	109524
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	SPQTPELVEALAFR	SPQTPELVEALAFR	3	SPQTPELVEALAFR3	12925.2	15108.3	13168.6
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	SPRPDSFEAEIK	SPRPDSFEAEIK	3	SPRPDSFEAEIK3	89037.7	105640	93586.4
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	SPRPQSFCHSSSISPQDK	SPRPQSFC(UniMod:4)HSSSISPQDK	4	SPRPQSFC(UniMod:4)HSSSISPQDK4	52519.5	61042.7	79554.7
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	SPSADNIHTLTGFAK	SPSADNIHTLTGFAK	3	SPSADNIHTLTGFAK3	9013.22	9850.15	
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	SPSAEDVAGVLESYHAK	SPSAEDVAGVLESYHAK	3	SPSAEDVAGVLESYHAK3	69043.6	48500.7	62975.7
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	SPSAQLMEQVAQLK	SPSAQLMEQVAQLK	2	SPSAQLMEQVAQLK2	95918.2	93970.8	112438
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	SPSAQLMEQVAQLK	SPSAQLMEQVAQLK	3	SPSAQLMEQVAQLK3	57963	62769.3	76059.7
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	SPSDDGSGGVRDDGQLSPGVLVR	SPSDDGSGGVRDDGQLSPGVLVR	3	SPSDDGSGGVRDDGQLSPGVLVR3	12375.2	15407.3	17220.8
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	SPSDNSLNTTGIICR	SPSDNSLNTTGIIC(UniMod:4)R	2	SPSDNSLNTTGIIC(UniMod:4)R2	2888.49	3600.97	
Q5M7V8	Q5M7V8	TR150_RAT	Thrap3	Thyroid hormone receptor-associated protein 3	1	SPSELFAQHIVTIVHHVK	SPSELFAQHIVTIVHHVK	4	SPSELFAQHIVTIVHHVK4	12262.5	3652.44	
P97532	P97532	THTM_RAT	Mpst	3-mercaptopyruvate sulfurtransferase	1	SPSEPAEFCAQLDPSFIK	SPSEPAEFC(UniMod:4)AQLDPSFIK	3	SPSEPAEFC(UniMod:4)AQLDPSFIK3	16788.3	10595.7	16032.9
A0A8I5ZVI9	A0A8I5ZVI9	A0A8I5ZVI9_RAT	Ranbp3	RAN binding protein 3	1	SPSESAEGTHTFEEK	SPSESAEGTHTFEEK	3	SPSESAEGTHTFEEK3	19715.2	23468.8	21233.6
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	SPSFSSTSETSAK	SPSFSSTSETSAK	2	SPSFSSTSETSAK2	18901.6	10593	17398.8
A0A8I5Y7I2	A0A8I5Y7I2	A0A8I5Y7I2_RAT	Kctd12	Potassium channel tetramerization domain containing 12	1	SPSGGAAGPLLTPSQSLDGSR	SPSGGAAGPLLTPSQSLDGSR	2	SPSGGAAGPLLTPSQSLDGSR2	108538	86942.4	94466.2
A0A8I5Y7I2	A0A8I5Y7I2	A0A8I5Y7I2_RAT	Kctd12	Potassium channel tetramerization domain containing 12	1	SPSGGAAGPLLTPSQSLDGSR	SPSGGAAGPLLTPSQSLDGSR	3	SPSGGAAGPLLTPSQSLDGSR3	61597.6	33744.1	58356
A0A8I5Y7I2	A0A8I5Y7I2	A0A8I5Y7I2_RAT	Kctd12	Potassium channel tetramerization domain containing 12	1	SPSGGAAGPLLTPSQSLDGSRR	SPSGGAAGPLLTPSQSLDGSRR	3	SPSGGAAGPLLTPSQSLDGSRR3	54260.9	66616.7	38459
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	SPSGGEHAPSEDSGK	SPSGGEHAPSEDSGK	3	SPSGGEHAPSEDSGK3			16246.2
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	SPSGGEHAPSEDSGKDRDSDEAVFLTA	SPSGGEHAPSEDSGKDRDSDEAVFLTA	3	SPSGGEHAPSEDSGKDRDSDEAVFLTA3		2814.44	10507.8
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	SPSGGEHAPSEDSGKDRDSDEAVFLTA	SPSGGEHAPSEDSGKDRDSDEAVFLTA	4	SPSGGEHAPSEDSGKDRDSDEAVFLTA4			12115.9
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	SPSGPHGLGPLLCPPGAFLPGLK	SPSGPHGLGPLLC(UniMod:4)PPGAFLPGLK	3	SPSGPHGLGPLLC(UniMod:4)PPGAFLPGLK3	31558.1	19111.9	22805.4
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	SPSGSAFGSQENLR	SPSGSAFGSQENLR	2	SPSGSAFGSQENLR2	33945.3	29983.5	29477.5
E9PU15	E9PU15	E9PU15_RAT	Dicer1	Endoribonuclease Dicer	1	SPSGSCAAAVSPR	SPSGSC(UniMod:4)AAAVSPR	2	SPSGSC(UniMod:4)AAAVSPR2	3914	6177.43	7132.87
M0R4P9	M0R4P9	M0R4P9_RAT	Ube2h	Ubiquitin-conjugating enzyme E2H	1	SPSIGFMNK	SPSIGFMNK	2	SPSIGFMNK2	185837	203947	183555
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	SPSISNMAALSR	SPSISNMAALSR	2	SPSISNMAALSR2	12182.9	7921.33	13914.7
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	SPSMSSIDLVSASDDVHR	SPSMSSIDLVSASDDVHR	3	SPSMSSIDLVSASDDVHR3	9022.31	4562.03	3419.35
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	SPSNAVLWLWTSHNR	SPSNAVLWLWTSHNR	3	SPSNAVLWLWTSHNR3	38858.6	65062.2	47055.4
A0A0G2JSI4	A0A0G2JSI4	A0A0G2JSI4_RAT	Adgre5	Adhesion G protein-coupled receptor E5	1	SPSNTELALMVK	SPSNTELALMVK	2	SPSNTELALMVK2	105884	109475	105245
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	SPSNTGEYTSLYNK	SPSNTGEYTSLYNK	2	SPSNTGEYTSLYNK2	12570.2	15575.8	15001.7
A0A8I5ZKS4	A0A8I5ZKS4	A0A8I5ZKS4_RAT	Hycc1	Family with sequence similarity 126, member A	1	SPSPAIGCVAGADAHR	SPSPAIGC(UniMod:4)VAGADAHR	3	SPSPAIGC(UniMod:4)VAGADAHR3	18872.8	15601.4	33737.4
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	SPSPCAYGR	SPSPC(UniMod:4)AYGR	2	SPSPC(UniMod:4)AYGR2	227510	289078	275015
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	SPSPCPFR	SPSPC(UniMod:4)PFR	2	SPSPC(UniMod:4)PFR2	29246.7	34987.1	39268.8
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	SPSPEASATPADSLDTASLPK	SPSPEASATPADSLDTASLPK	3	SPSPEASATPADSLDTASLPK3	7357.35	7398.19	4303.71
A0A8I6A8L3	A0A8I6A8L3	A0A8I6A8L3_RAT	Dnpep	Aspartyl aminopeptidase	1	SPSPFHVVAECR	SPSPFHVVAEC(UniMod:4)R	3	SPSPFHVVAEC(UniMod:4)R3	19341.2	18826.5	15055.4
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	SPSPLQR	SPSPLQR	2	SPSPLQR2	9669.18	15678.6	13026.3
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	SPSPLQRPASLDLDSR	SPSPLQRPASLDLDSR	3	SPSPLQRPASLDLDSR3	14441.4	29788.2	18767
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	SPSPSPGSWR	SPSPSPGSWR	2	SPSPSPGSWR2	25559.8	25084.5	24883.9
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	SPSQGDEDSALILTQDNLK	SPSQGDEDSALILTQDNLK	3	SPSQGDEDSALILTQDNLK3	36828.1	28197.7	31880.3
Q5I0D1	Q5I0D1	GLOD4_RAT	Glod4	Glyoxalase domain-containing protein 4	1	SPSQSDPVLK	SPSQSDPVLK	2	SPSQSDPVLK2	21990.3	16559.3	17883.5
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	SPSRPVSDCQTEPCLEADMGK	SPSRPVSDC(UniMod:4)QTEPC(UniMod:4)LEADMGK	3	SPSRPVSDC(UniMod:4)QTEPC(UniMod:4)LEADMGK3	32329.1	31734.2	31862.6
Q62848	Q62848	ARFG1_RAT	Arfgap1	ADP-ribosylation factor GTPase-activating protein 1	1	SPSSDSWTCADASTGR	SPSSDSWTC(UniMod:4)ADASTGR	2	SPSSDSWTC(UniMod:4)ADASTGR2	21692.4	19224.6	21250
Q62848	Q62848	ARFG1_RAT	Arfgap1	ADP-ribosylation factor GTPase-activating protein 1	1	SPSSDSWTCADASTGRR	SPSSDSWTC(UniMod:4)ADASTGRR	3	SPSSDSWTC(UniMod:4)ADASTGRR3	7144.76	11210.3	6327.26
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	SPSSEVWFDR	SPSSEVWFDR	2	SPSSEVWFDR2	3869.89	8715.4	3137.88
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	SPSSEVWFDRR	SPSSEVWFDRR	3	SPSSEVWFDRR3	25251.7	36425.4	41434
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	SPSSLLIAGLHLQ	SPSSLLIAGLHLQ	2	SPSSLLIAGLHLQ2	22718.6	13518.3	19352.1
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	SPSSLLIAGLHLQ	SPSSLLIAGLHLQ	3	SPSSLLIAGLHLQ3	3175.05	1996.18	1130.23
Q9QZR8	Q9QZR8	PDZD2_RAT	Pdzd2	PDZ domain-containing protein 2	1	SPSSMTLTVSR	SPSSMTLTVSR	2	SPSSMTLTVSR2	4574.09		965.93
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SPSSSDINK	SPSSSDINK	1	SPSSSDINK1			57531.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SPSSSDINK	SPSSSDINK	2	SPSSSDINK2	1.13435e+06		685587
A0A8I5ZQE9	A0A8I5ZQE9	A0A8I5ZQE9_RAT	Irf9	Interferon regulatory factor 9	1	SPSSSHTQENLITVR	SPSSSHTQENLITVR	3	SPSSSHTQENLITVR3	13630	8093.8	7020.84
Q5RJQ4	Q5RJQ4	SIR2_RAT	Sirt2	NAD-dependent protein deacetylase sirtuin-2	1	SPSTGLYANLEK	SPSTGLYANLEK	2	SPSTGLYANLEK2	15946.4	15791.7	22389
A0A0U1RRS5	A0A0U1RRS5	A0A0U1RRS5_RAT	Smg7	Nonsense-mediated mRNA decay factor	1	SPSTSCDSGEKPVVTFK	SPSTSC(UniMod:4)DSGEKPVVTFK	3	SPSTSC(UniMod:4)DSGEKPVVTFK3	9901.82	7782.38	8277.73
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	SPSTTLPK	SPSTTLPK	2	SPSTTLPK2	43470.3	55682.3	68535.3
P57097	P57097	MERTK_RAT	Mertk	Tyrosine-protein kinase Mer	1	SPSVLTVAGLTETAVFSCEAHNDK	SPSVLTVAGLTETAVFSC(UniMod:4)EAHNDK	3	SPSVLTVAGLTETAVFSC(UniMod:4)EAHNDK3		3370.49	
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	SPSVSPSK	SPSVSPSK	2	SPSVSPSK2			32948.7
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	SPSVVLHVLLPQNR	SPSVVLHVLLPQNR	3	SPSVVLHVLLPQNR3	22126	15422	
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	SPSWQRPNQAAPSTGR	SPSWQRPNQAAPSTGR	3	SPSWQRPNQAAPSTGR3	143309	125052	133077
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	SPTASLGPPTKE	SPTASLGPPTKE	2	SPTASLGPPTKE2	150359	118966	116393
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	SPTDEITNLVPSVQYLDK	SPTDEITNLVPSVQYLDK	3	SPTDEITNLVPSVQYLDK3	18787.5	17900.8	16548.7
Q792S6	Q792S6	BOK_RAT	Bok	Bcl-2-related ovarian killer protein	1	SPTDKELVAQAK	SPTDKELVAQAK	3	SPTDKELVAQAK3	6150.82	5027.96	7706.56
D3ZFJ3	D3ZFJ3	3BP1_RAT	Sh3bp1	SH3 domain-binding protein 1	1	SPTDTTALAEDMTR	SPTDTTALAEDMTR	2	SPTDTTALAEDMTR2	15632.3	9524.51	19950.3
D3ZFJ3	D3ZFJ3	3BP1_RAT	Sh3bp1	SH3 domain-binding protein 1	1	SPTDTTALAEDMTR	SPTDTTALAEDMTR	3	SPTDTTALAEDMTR3	2410.85	2787.13	
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	SPTDWALFTYEGNSNDIR	SPTDWALFTYEGNSNDIR	3	SPTDWALFTYEGNSNDIR3	51223.4	46521	48233.8
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	SPTENVNTPVGK	SPTENVNTPVGK	2	SPTENVNTPVGK2	969.208	2019.58	910.347
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	SPTFCEHCGTLLWGLAR	SPTFC(UniMod:4)EHC(UniMod:4)GTLLWGLAR	3	SPTFC(UniMod:4)EHC(UniMod:4)GTLLWGLAR3	64467.2	68177.2	56622.5
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	SPTGSWQR	SPTGSWQR	2	SPTGSWQR2	5923.83	5127.42	4032.67
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	SPTIGFNNLDEAHVDR	SPTIGFNNLDEAHVDR	3	SPTIGFNNLDEAHVDR3	14820.5	13576.5	12518.8
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	SPTKPVQTITPHGK	SPTKPVQTITPHGK	3	SPTKPVQTITPHGK3			1556.56
A0A0G2K1A2	A0A0G2K1A2	A0A0G2K1A2_RAT	Mpo	Myeloperoxidase	1	SPTLGASNR	SPTLGASNR	2	SPTLGASNR2	49927	21319.2	19864.8
B0BN72	B0BN72	MCRI1_RAT	Mcrip1	Mapk-regulated corepressor-interacting protein 1	1	SPTNSSEIFTPAHEENVR	SPTNSSEIFTPAHEENVR	3	SPTNSSEIFTPAHEENVR3	6533.6	6441.34	
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	SPTPGWWNPAGTSR	SPTPGWWNPAGTSR	2	SPTPGWWNPAGTSR2	1.75816e+06	2.02568e+06	2.04156e+06
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	SPTPGWWNPAGTSR	SPTPGWWNPAGTSR	3	SPTPGWWNPAGTSR3	25428.7	20447.3	35384.7
Q9JLU4	Q9JLU4	SHAN3_RAT	Shank3	SH3 and multiple ankyrin repeat domains protein 3	1	SPTPVHSPDADRPGPLFVDVQTR	SPTPVHSPDADRPGPLFVDVQTR	4	SPTPVHSPDADRPGPLFVDVQTR4	5884.73		
Q63415	Q63415	PCSK6_RAT	Pcsk6	Proprotein convertase subtilisin/kexin type 6	1	SPTQCLSCR	SPTQC(UniMod:4)LSC(UniMod:4)R	2	SPTQC(UniMod:4)LSC(UniMod:4)R2	1061.05	3223.78	3393.75
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	SPTQWDFPVELCCR	SPTQWDFPVELC(UniMod:4)C(UniMod:4)R	2	SPTQWDFPVELC(UniMod:4)C(UniMod:4)R2	3132.01	3977.29	4137.84
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	SPTQWDFPVELCCR	SPTQWDFPVELC(UniMod:4)C(UniMod:4)R	3	SPTQWDFPVELC(UniMod:4)C(UniMod:4)R3	3361.31	1894.34	
A0A0G2JZP9	A0A8I6AJA6;A0A0G2JZP9	A0A0G2JZP9_RAT	Rnf11	Ring finger protein 11-like 1	0	SPTSDDISLLHESQSDR	SPTSDDISLLHESQSDR	3	SPTSDDISLLHESQSDR3	9546.36	3156.27	
D3ZS97	D3ZS97	D3ZS97_RAT	Cd226	CD226 molecule	1	SPTSPIQTTDDEK	SPTSPIQTTDDEK	2	SPTSPIQTTDDEK2	50223.9	36125.5	41109.7
D3ZS97	D3ZS97	D3ZS97_RAT	Cd226	CD226 molecule	1	SPTSPIQTTDDEKEDIYVNYPTFSR	SPTSPIQTTDDEKEDIYVNYPTFSR	3	SPTSPIQTTDDEKEDIYVNYPTFSR3	203157	208278	228156
D3ZS97	D3ZS97	D3ZS97_RAT	Cd226	CD226 molecule	1	SPTSPIQTTDDEKEDIYVNYPTFSR	SPTSPIQTTDDEKEDIYVNYPTFSR	4	SPTSPIQTTDDEKEDIYVNYPTFSR4	33086.8	41698.8	36485.6
E9PSU8	E9PSU8	E9PSU8_RAT	AABR07034730.3	Ig-like domain-containing protein	1	SPTTMIYNDDK	SPTTMIYNDDK	2	SPTTMIYNDDK2	5327.79	2362.05	1778.21
E9PSU8	E9PSU8	E9PSU8_RAT	AABR07034730.3	Ig-like domain-containing protein	1	SPTTMIYNDDKRPDGVPDR	SPTTMIYNDDKRPDGVPDR	3	SPTTMIYNDDKRPDGVPDR3	15053.8	7806.11	17892.3
E9PSU8	E9PSU8	E9PSU8_RAT	AABR07034730.3	Ig-like domain-containing protein	1	SPTTMIYNDDKRPDGVPDR	SPTTMIYNDDKRPDGVPDR	4	SPTTMIYNDDKRPDGVPDR4	103166	87244.6	82657.7
A0A8I6A3F2	A0A8I6A3F2;A0A8I6GEK5	A0A8I6A3F2_RAT	AABR07034730.2	Ig-like domain-containing protein	0	SPTTMIYRDDK	SPTTMIYRDDK	3	SPTTMIYRDDK3	5204.67	7097.75	6709.55
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	SPTTTQSPK	SPTTTQSPK	2	SPTTTQSPK2			9500.72
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	SPTVVCSLCK	SPTVVC(UniMod:4)SLC(UniMod:4)K	2	SPTVVC(UniMod:4)SLC(UniMod:4)K2	7579.04	3155.61	10214.7
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	SPVCGSDGVTYGTECDLK	SPVC(UniMod:4)GSDGVTYGTEC(UniMod:4)DLK	2	SPVC(UniMod:4)GSDGVTYGTEC(UniMod:4)DLK2	1507.14		2521.84
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	SPVCGSDGVTYGTECDLKK	SPVC(UniMod:4)GSDGVTYGTEC(UniMod:4)DLKK	3	SPVC(UniMod:4)GSDGVTYGTEC(UniMod:4)DLKK3	2388.64		2635.56
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	SPVCMEFQYQAMGGHGVALQVVR	SPVC(UniMod:4)MEFQYQAMGGHGVALQVVR	3	SPVC(UniMod:4)MEFQYQAMGGHGVALQVVR3	50027	44708.8	42544.6
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	SPVDIVTGGISPVR	SPVDIVTGGISPVR	2	SPVDIVTGGISPVR2	54776.9	58711.4	54688.3
Q9QXY4	Q9QXY4	OGFR_RAT	Ogfr	Opioid growth factor receptor	1	SPVEDPDSDTMGTSVDESEELAR	SPVEDPDSDTMGTSVDESEELAR	3	SPVEDPDSDTMGTSVDESEELAR3	8557.26	5909.68	12116.2
B2GUX8	B2GUX8	B2GUX8_RAT	Sh3bp5l	SH3 domain-binding protein 5	1	SPVEEEPGGGGSNSSETK	SPVEEEPGGGGSNSSETK	2	SPVEEEPGGGGSNSSETK2	10244	1347.68	3029.61
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	SPVELEEDFDVIFDPYAPK	SPVELEEDFDVIFDPYAPK	3	SPVELEEDFDVIFDPYAPK3	8948.87	5663.81	6466.18
Q66HG9	Q66HG9	MAVS_RAT	Mavs	Mitochondrial antiviral-signaling protein	1	SPVENSEEPPQANFGAIPR	SPVENSEEPPQANFGAIPR	3	SPVENSEEPPQANFGAIPR3	9672.1	8032.69	6703.57
Q62833	Q62833	GRK5_RAT	Grk5	G protein-coupled receptor kinase 5	1	SPVFIAQVGQDLVSQTEK	SPVFIAQVGQDLVSQTEK	2	SPVFIAQVGQDLVSQTEK2	6233.54	5870.42	
P20909	P20909	COBA1_RAT	Col11a1	Collagen alpha-1(XI) chain	1	SPVFLFEDHTGKPTPENYPLFSTVNIADGK	SPVFLFEDHTGKPTPENYPLFSTVNIADGK	4	SPVFLFEDHTGKPTPENYPLFSTVNIADGK4	67264.1	46562.1	67211.6
Q9JI03	Q9JI03	CO5A1_RAT	Col5a1	Collagen alpha-1(V) chain	1	SPVFLYEDHTGKPGPEEYPLFPGINLSDGK	SPVFLYEDHTGKPGPEEYPLFPGINLSDGK	4	SPVFLYEDHTGKPGPEEYPLFPGINLSDGK4	57559.5	46387.7	43431.4
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	SPVFSHLSSSLQGLWTIR	SPVFSHLSSSLQGLWTIR	3	SPVFSHLSSSLQGLWTIR3	43559	58146.6	50113.3
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	SPVLDCSIADCLHFR	SPVLDC(UniMod:4)SIADC(UniMod:4)LHFR	2	SPVLDC(UniMod:4)SIADC(UniMod:4)LHFR2	5153.98	4595.7	6334.09
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	SPVLDCSIADCLHFR	SPVLDC(UniMod:4)SIADC(UniMod:4)LHFR	3	SPVLDC(UniMod:4)SIADC(UniMod:4)LHFR3	33033.2	35261.2	30506.8
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SPVLEDIAGYLMK	SPVLEDIAGYLMK	2	SPVLEDIAGYLMK2	635638	723538	643560
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SPVLEDIAGYLMK	SPVLEDIAGYLMK	3	SPVLEDIAGYLMK3	669120	915100	692560
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	SPVPAGEEAGELGESR	SPVPAGEEAGELGESR	2	SPVPAGEEAGELGESR2	10628.5	12267.1	9700.38
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	SPVPPEEAPFSR	SPVPPEEAPFSR	2	SPVPPEEAPFSR2	80500.6	99216.3	79019.9
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	SPVPVSGQK	SPVPVSGQK	2	SPVPVSGQK2	91348.7	98750.2	88146.1
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	SPVQCVSPELALTIALNPGGRPK	SPVQC(UniMod:4)VSPELALTIALNPGGRPK	3	SPVQC(UniMod:4)VSPELALTIALNPGGRPK3	744.265	2501.52	
G3V9L1	G3V9L1	G3V9L1_RAT	Tex2	Testis expressed 2	1	SPVQSAESSPTAGK	SPVQSAESSPTAGK	2	SPVQSAESSPTAGK2	6971.06	7050.01	6814.34
Q6MG56	Q6MG56	LY66F_RAT	Ly6g6f	Lymphocyte antigen 6 complex locus protein G6f	1	SPVSGSSTILVAQVQVDRPISDLGK	SPVSGSSTILVAQVQVDRPISDLGK	3	SPVSGSSTILVAQVQVDRPISDLGK3	394915	369361	360157
Q6MG56	Q6MG56	LY66F_RAT	Ly6g6f	Lymphocyte antigen 6 complex locus protein G6f	1	SPVSGSSTILVAQVQVDRPISDLGK	SPVSGSSTILVAQVQVDRPISDLGK	4	SPVSGSSTILVAQVQVDRPISDLGK4	29974.3	18709.7	20616.8
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	SPVTFLSDLR	SPVTFLSDLR	2	SPVTFLSDLR2	19843	6058.77	5524.87
D3Z840	D3Z840	D3Z840_RAT	Fanci	FA complementation group I	1	SPVTLLR	SPVTLLR	2	SPVTLLR2	45106.3	60105.7	56013.4
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	SPVTNIAR	SPVTNIAR	2	SPVTNIAR2	121072	113632	121409
Q63313	Q63313	LBP_RAT	Lbp	Lipopolysaccharide-binding protein	1	SPVTTPTPTMSLPEDSK	SPVTTPTPTMSLPEDSK	2	SPVTTPTPTMSLPEDSK2	37835.7	32210.9	31537.1
D4A3A9	D4A3A9	D4A3A9_RAT	Galnt15	Polypeptide N-acetylgalactosaminyltransferase	1	SPVVPQEVVAVDR	SPVVPQEVVAVDR	2	SPVVPQEVVAVDR2	6696.25	8214.12	8482.63
A0A8I5ZS17	A0A8I5ZS17	A0A8I5ZS17_RAT	Snx25	Sorting nexin 25	1	SPVYGNPQETAQGR	SPVYGNPQETAQGR	2	SPVYGNPQETAQGR2	5321.95	5402.82	4366.23
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	SPVYLTVLK	SPVYLTVLK	2	SPVYLTVLK2	35943.1	26256.5	19576.6
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	SPVYSHFNETLLGVSVIR	SPVYSHFNETLLGVSVIR	3	SPVYSHFNETLLGVSVIR3	37864.9	41110.4	32772.1
P29147	P29147	BDH_RAT	Bdh1	D-beta-hydroxybutyrate dehydrogenase, mitochondrial	1	SPYCITK	SPYC(UniMod:4)ITK	2	SPYC(UniMod:4)ITK2	52344.9	47303.3	62900.7
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	SPYDCSNFDK	SPYDC(UniMod:4)SNFDK	2	SPYDC(UniMod:4)SNFDK2	19589.5	16590.6	12328.4
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	SPYDCSNFDKEFLSEKPR	SPYDC(UniMod:4)SNFDKEFLSEKPR	3	SPYDC(UniMod:4)SNFDKEFLSEKPR3	4490.9	6010.79	
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	SPYDCSNFDKEFLSEKPR	SPYDC(UniMod:4)SNFDKEFLSEKPR	4	SPYDC(UniMod:4)SNFDKEFLSEKPR4	7394.22	16462.2	26879.7
Q76LD0	Q76LD0	CRDL1_RAT	Chrdl1	Chordin-like protein 1	1	SPYDPPPSR	SPYDPPPSR	2	SPYDPPPSR2	81516.1	85248.6	101043
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	SPYEEQLEQQR	SPYEEQLEQQR	2	SPYEEQLEQQR2	19822	23988.2	18456.5
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	SPYEEQLEQQR	SPYEEQLEQQR	3	SPYEEQLEQQR3	6716.02	9608.38	9357.19
P08650	P08650	CO5_RAT	C5	Complement C5	1	SPYIDKITHYNYLILSK	SPYIDKITHYNYLILSK	4	SPYIDKITHYNYLILSK4	5748.62	6597.29	10215.6
Q3B7U9	Q3B7U9	FKBP8_RAT	Fkbp8	Peptidyl-prolyl cis-trans isomerase FKBP8	1	SPYIPPHAALCLEVTLK	SPYIPPHAALC(UniMod:4)LEVTLK	3	SPYIPPHAALC(UniMod:4)LEVTLK3	20477.8	14592.4	
P50399	P50398;P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	0	SPYLYPLYGLGELPQGFAR	SPYLYPLYGLGELPQGFAR	3	SPYLYPLYGLGELPQGFAR3	32517.7	31953.9	31341.7
P18292	P18292	THRB_RAT	F2	Prothrombin	1	SPYNHRWYQMGIVSWGEGCDR	SPYNHRWYQMGIVSWGEGC(UniMod:4)DR	3	SPYNHRWYQMGIVSWGEGC(UniMod:4)DR3	24945.1	28103	34168.5
P18292	P18292	THRB_RAT	F2	Prothrombin	1	SPYNHRWYQMGIVSWGEGCDR	SPYNHRWYQMGIVSWGEGC(UniMod:4)DR	4	SPYNHRWYQMGIVSWGEGC(UniMod:4)DR4	63330.3	51820.4	65199.3
P18292	P18292	THRB_RAT	F2	Prothrombin	1	SPYNHRWYQMGIVSWGEGCDRNGK	SPYNHRWYQMGIVSWGEGC(UniMod:4)DRNGK	4	SPYNHRWYQMGIVSWGEGC(UniMod:4)DRNGK4	5560.81	6421.12	8292.11
P27952	A0A0G2K8H4;A0A0U1RVI9;D3ZIY7;D3ZT78;A0A8I6ADQ7;D3ZAS1;P27952;A0A8J8XHT4;A0A8I6A3D4;D3ZQW7	RS2_RAT	Rps2	Small ribosomal subunit protein uS5	0	SPYQEFTDHLVK	SPYQEFTDHLVK	2	SPYQEFTDHLVK2	4141.22	2991.81	2693.6
P27952	A0A0G2K8H4;A0A0U1RVI9;D3ZIY7;D3ZT78;A0A8I6ADQ7;D3ZAS1;P27952;A0A8J8XHT4;A0A8I6A3D4;D3ZQW7	RS2_RAT	Rps2	Small ribosomal subunit protein uS5	0	SPYQEFTDHLVK	SPYQEFTDHLVK	3	SPYQEFTDHLVK3	19692.3	39826.1	32588.5
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	SPYQLVLQHSR	SPYQLVLQHSR	2	SPYQLVLQHSR2	25429.4	15651	19587.2
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	SPYQLVLQHSR	SPYQLVLQHSR	3	SPYQLVLQHSR3	512408	498098	476105
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	SPYSWGLQQLASCLLNPNPSER	SPYSWGLQQLASC(UniMod:4)LLNPNPSER	3	SPYSWGLQQLASC(UniMod:4)LLNPNPSER3	3708.4	5948.56	
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	SPYTSGTAAK	SPYTSGTAAK	2	SPYTSGTAAK2	29577.8	26942.5	26094.5
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	SPYTVTVGQACNPTACR	SPYTVTVGQAC(UniMod:4)NPTAC(UniMod:4)R	2	SPYTVTVGQAC(UniMod:4)NPTAC(UniMod:4)R2	4.20576e+06	4.2736e+06	4.53204e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	SPYTVTVGQACNPTACR	SPYTVTVGQAC(UniMod:4)NPTAC(UniMod:4)R	3	SPYTVTVGQAC(UniMod:4)NPTAC(UniMod:4)R3	1.67373e+06	1.97588e+06	2.10031e+06
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	SQAAEDSLR	SQAAEDSLR	2	SQAAEDSLR2	471404	506895	465976
B0LT89	B0LT89	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	1	SQACGGNLGSIEELR	SQAC(UniMod:4)GGNLGSIEELR	2	SQAC(UniMod:4)GGNLGSIEELR2	154526	172526	158271
B0LT89	B0LT89	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	1	SQACGGNLGSIEELR	SQAC(UniMod:4)GGNLGSIEELR	3	SQAC(UniMod:4)GGNLGSIEELR3	14132.3	14926.3	18942.8
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	SQADKDYYQLQAVLEAER	SQADKDYYQLQAVLEAER	3	SQADKDYYQLQAVLEAER3	2881.87	4979.93	
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	SQADKDYYQLQAVLEAERR	SQADKDYYQLQAVLEAERR	4	SQADKDYYQLQAVLEAERR4	10563.3	23761.4	12870
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	SQADQFCQR	SQADQFC(UniMod:4)QR	2	SQADQFC(UniMod:4)QR2	33962.6	24039.6	29616.3
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	SQADTVLLQPSADFR	SQADTVLLQPSADFR	2	SQADTVLLQPSADFR2	19851.9	16544.6	20845.2
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	SQAEQLLK	SQAEQLLK	2	SQAEQLLK2	82153.1	105052	107112
P53565	P53565;A0A8I5ZR58	CUX1_RAT	Cux1	Homeobox protein cut-like 1	0	SQAETIALEK	SQAETIALEK	2	SQAETIALEK2	27925	22678.8	17729.8
D4A7F0	D4A7F0	D4A7F0_RAT	Ubr3	E3 ubiquitin-protein ligase	1	SQAGGACDCGDSNVMR	SQAGGAC(UniMod:4)DC(UniMod:4)GDSNVMR	2	SQAGGAC(UniMod:4)DC(UniMod:4)GDSNVMR2	1034.72	1344.98	
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	SQAGLAR	SQAGLAR	1	SQAGLAR1	47641.1	5667.66	35003.8
B0BN63	B0BN63	B0BN63_RAT	Ahsa1	Activator of Hsp90 ATPase activity 1	1	SQAKPVGVK	SQAKPVGVK	2	SQAKPVGVK2			2652.23
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	SQALQLMQNR	SQALQLMQNR	2	SQALQLMQNR2	11218.3	13057.4	5036.15
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	SQALSSSSDEGSPCLAVGR	SQALSSSSDEGSPC(UniMod:4)LAVGR	2	SQALSSSSDEGSPC(UniMod:4)LAVGR2	15728.3	13434.5	10812.2
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	SQALSSSSDEGSPCLAVGR	SQALSSSSDEGSPC(UniMod:4)LAVGR	3	SQALSSSSDEGSPC(UniMod:4)LAVGR3	13864.7	7439.37	14090.4
A0A096MJT6	A0A096MJT6	A0A096MJT6_RAT	Bltp1	Similar to RIKEN cDNA D630029K19	1	SQALYSAQR	SQALYSAQR	2	SQALYSAQR2	2879.99	3342.3	958.257
Q8K3R0	Q8K3R0;A0A0G2K1L3	EST2A_RAT	Ces2a	Pyrethroid hydrolase Ces2a	0	SQAPVYFYEFQHLPSFIK	SQAPVYFYEFQHLPSFIK	3	SQAPVYFYEFQHLPSFIK3	8096.66	3972.68	
P47861	P47861	SYT5_RAT	Syt5	Synaptotagmin-5	1	SQAQAQVHLQEVK	SQAQAQVHLQEVK	2	SQAQAQVHLQEVK2	3202.5	834.446	
P47861	P47861	SYT5_RAT	Syt5	Synaptotagmin-5	1	SQAQAQVHLQEVK	SQAQAQVHLQEVK	3	SQAQAQVHLQEVK3	53515.2	34903.5	46148.4
A0A8I6AT07	M0R4Q5;A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	0	SQAQSFIAHNFK	SQAQSFIAHNFK	3	SQAQSFIAHNFK3	17374.9	22080.5	10962.3
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	SQASDLSAK	SQASDLSAK	2	SQASDLSAK2	101969	105811	104635
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	SQASGIEVIQLFPEK	SQASGIEVIQLFPEK	2	SQASGIEVIQLFPEK2	101736	94518.6	99776.9
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	SQASGIEVIQLFPEK	SQASGIEVIQLFPEK	3	SQASGIEVIQLFPEK3	12290.6	13232.6	14433.4
Q9Z136	Q9Z136	TSC1_RAT	Tsc1	Hamartin	1	SQASGQLLAAESR	SQASGQLLAAESR	2	SQASGQLLAAESR2	5993.23	6396.37	3745.79
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	SQATQYQR	SQATQYQR	2	SQATQYQR2			4973.13
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	SQAVQQLK	SQAVQQLK	1	SQAVQQLK1	630.572		
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	SQAVQQLK	SQAVQQLK	2	SQAVQQLK2	75880.8	62407.2	80053.7
M0R8J3	M0R8J3	M0R8J3_RAT	Jmy	Junction mediating and regulatory protein, p53 cofactor	1	SQAWTESGSPR	SQAWTESGSPR	2	SQAWTESGSPR2	5679.3	6469.7	10145
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	SQCDAIR	SQC(UniMod:4)DAIR	2	SQC(UniMod:4)DAIR2	42051.5	56731.6	41029.4
D3ZSC2	D3ZSC2	D3ZSC2_RAT	Pdcd2l	Programmed cell death 2-like	1	SQCLQVPEK	SQC(UniMod:4)LQVPEK	2	SQC(UniMod:4)LQVPEK2	24203.8	23240.8	19664.2
D3ZSC2	D3ZSC2	D3ZSC2_RAT	Pdcd2l	Programmed cell death 2-like	1	SQCLQVPEKETR	SQC(UniMod:4)LQVPEKETR	3	SQC(UniMod:4)LQVPEKETR3	12307.3		14600.3
Q6V9V9	Q6V9V9	Q6V9V9_RAT	Stk25	Serine/threonine kinase 25	1	SQCLSTLVR	SQC(UniMod:4)LSTLVR	2	SQC(UniMod:4)LSTLVR2	4236.42		
Q6V9V9	Q6V9V9	Q6V9V9_RAT	Stk25	Serine/threonine kinase 25	1	SQCLSTLVRPVFGELK	SQC(UniMod:4)LSTLVRPVFGELK	3	SQC(UniMod:4)LSTLVRPVFGELK3	18761	25166.3	18939.9
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	SQCMQLVGDCLMK	SQC(UniMod:4)MQLVGDC(UniMod:4)LMK	2	SQC(UniMod:4)MQLVGDC(UniMod:4)LMK2	10020.3	8014.86	9834.42
A0A0G2K089	A0A0G2K089	A0A0G2K089_RAT	Dennd4c	DENN domain containing 4C	1	SQCPTGEVPFSR	SQC(UniMod:4)PTGEVPFSR	2	SQC(UniMod:4)PTGEVPFSR2	9034.9	10805.9	11868.1
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	SQDADLPGSSGAPENLTFR	SQDADLPGSSGAPENLTFR	3	SQDADLPGSSGAPENLTFR3	2801.19	6246.84	
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	SQDAEVGDGTTSVTLLAAEFLK	SQDAEVGDGTTSVTLLAAEFLK	3	SQDAEVGDGTTSVTLLAAEFLK3	25934.2	31279.3	28584.4
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	SQDDIIPPSR	SQDDIIPPSR	2	SQDDIIPPSR2	17208.7	13711.8	14742.2
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	SQDEAPGDPIQQLNLK	SQDEAPGDPIQQLNLK	2	SQDEAPGDPIQQLNLK2	1.6984e+06	1.50864e+06	1.60182e+06
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	SQDEAPGDPIQQLNLK	SQDEAPGDPIQQLNLK	3	SQDEAPGDPIQQLNLK3	279030	269883	311320
D3ZL10	D3ZL10	D3ZL10_RAT	Col6a6	Collagen type VI alpha 6 chain	1	SQDEVAQAAEELR	SQDEVAQAAEELR	2	SQDEVAQAAEELR2	4873.04	5958.71	11935.7
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	SQDGDAHPSCQEK	SQDGDAHPSC(UniMod:4)QEK	2	SQDGDAHPSC(UniMod:4)QEK2			2344.26
A0A0G2K652	A0A0G2K652	A0A0G2K652_RAT	Cul9	Cullin 9	1	SQDGSPAPAPVRPSTTLR	SQDGSPAPAPVRPSTTLR	3	SQDGSPAPAPVRPSTTLR3	12776.3	10628.4	6174.78
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	SQDGYTYPSR	SQDGYTYPSR	2	SQDGYTYPSR2	18733	27393.1	21189.5
A0A8I6AKZ8	A0A8I6AKZ8	A0A8I6AKZ8_RAT	Tia1	TIA1 cytotoxic granule-associated RNA binding protein	1	SQDHFHVFVGDLSPEITTEDIK	SQDHFHVFVGDLSPEITTEDIK	4	SQDHFHVFVGDLSPEITTEDIK4	11496.2		
Q5U2N3	Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	1	SQDHIPLAALPLLATSSSR	SQDHIPLAALPLLATSSSR	3	SQDHIPLAALPLLATSSSR3	9140.76	5012.37	11063.6
A0JN30	A0JN30	A0JN30_RAT	Cnpy2	Canopy FGF signaling regulator 2	1	SQDLHCGACR	SQDLHC(UniMod:4)GAC(UniMod:4)R	2	SQDLHC(UniMod:4)GAC(UniMod:4)R2			3898.25
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	SQDPGAVVLGK	SQDPGAVVLGK	2	SQDPGAVVLGK2	277023	271143	247195
Q9QWE9	Q9QWE9	GGT5_RAT	Ggt5	Glutathione hydrolase 5 proenzyme	1	SQDPLPWPALANTLETVAK	SQDPLPWPALANTLETVAK	3	SQDPLPWPALANTLETVAK3	5962.02	5391.65	9707.85
Q6AZ45	Q6AZ45	Q6AZ45_RAT	Fcer2	Fc fragment of IgE receptor II	1	SQDSQLSQNLNELQEDLINVK	SQDSQLSQNLNELQEDLINVK	3	SQDSQLSQNLNELQEDLINVK3	3777.65		
D3Z7Z5	D3Z7Z5	D3Z7Z5_RAT	Ranbp10	RAN binding protein 10	1	SQDSYPGSPSLSPR	SQDSYPGSPSLSPR	2	SQDSYPGSPSLSPR2	7714.02	7503.1	9254.16
F1M7Z1	F1M7Z1	F1M7Z1_RAT	Edc3	Enhancer of mRNA-decapping protein 3	1	SQDVAISPQQQQCSK	SQDVAISPQQQQC(UniMod:4)SK	2	SQDVAISPQQQQC(UniMod:4)SK2	11706.6	5972.11	4732.78
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	SQDVGFWEGEVVR	SQDVGFWEGEVVR	2	SQDVGFWEGEVVR2	74304.5	106616	96139.2
Q5BJY8	Q5BJY8	Q5BJY8_RAT	Manbal	Mannosidase beta like	1	SQEAEAEPSEPR	SQEAEAEPSEPR	2	SQEAEAEPSEPR2	28622.8	21758.7	23581.5
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	SQEAQGLQEQR	SQEAQGLQEQR	2	SQEAQGLQEQR2	82591.4	73079.3	73167.7
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	SQECYFDPELYR	SQEC(UniMod:4)YFDPELYR	2	SQEC(UniMod:4)YFDPELYR2	142031	152248	153063
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	SQEDDLNR	SQEDDLNR	2	SQEDDLNR2	21039.4		22645.6
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	SQEDLNEPIKR	SQEDLNEPIKR	3	SQEDLNEPIKR3	9384.85	12500.2	
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	SQEDMSEPLK	SQEDMSEPLK	2	SQEDMSEPLK2	26387.9	18683.8	34446.5
A0A8I6GLB8	A0A8I6GLB8	A0A8I6GLB8_RAT	Chmp1a	Charged multivesicular body protein 1A	1	SQEDQLSR	SQEDQLSR	2	SQEDQLSR2		5824.84	
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	SQEEAAPCSPTSSLGR	SQEEAAPC(UniMod:4)SPTSSLGR	2	SQEEAAPC(UniMod:4)SPTSSLGR2	39084.7	37902.5	31755.8
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	SQEEAAPCSPTSSLGR	SQEEAAPC(UniMod:4)SPTSSLGR	3	SQEEAAPC(UniMod:4)SPTSSLGR3	1.10457e+06	1.14943e+06	1.29188e+06
Q9JHW1	Q9JHW1	CBPD_RAT	Cpd	Carboxypeptidase D	1	SQEGDSISVVGR	SQEGDSISVVGR	2	SQEGDSISVVGR2	11605.9	9613.14	6899.43
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	SQEGENEEGDEGELVVR	SQEGENEEGDEGELVVR	2	SQEGENEEGDEGELVVR2	3589.11	8381.31	4140.92
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	SQEGENEEGDEGELVVR	SQEGENEEGDEGELVVR	3	SQEGENEEGDEGELVVR3	4641.69	3026.4	
A0A8I5YBR2	A0A8I5YBR2	A0A8I5YBR2_RAT	Cops6	COP9 signalosome complex subunit 6	1	SQEGRPMQVIGALIGK	SQEGRPMQVIGALIGK	3	SQEGRPMQVIGALIGK3	99977.5	93384.7	95759.7
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	SQEGSQFVK	SQEGSQFVK	2	SQEGSQFVK2	261554	323180	350266
P20651	P20651	PP2BB_RAT	Ppp3cb	Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform	1	SQEHFSHNTVR	SQEHFSHNTVR	3	SQEHFSHNTVR3			6100.46
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	SQEHFTALGSFYFLHESLK	SQEHFTALGSFYFLHESLK	3	SQEHFTALGSFYFLHESLK3	8639.5	11601.4	8011.18
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	SQEHFTALGSFYFLHESLK	SQEHFTALGSFYFLHESLK	4	SQEHFTALGSFYFLHESLK4	47545.7	37685.1	32399.4
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	SQELDVQVK	SQELDVQVK	2	SQELDVQVK2	291498	275634	293309
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	SQELEVK	SQELEVK	2	SQELEVK2	300743	331176	285597
P26051	P26051	CD44_RAT	Cd44	CD44 antigen	1	SQEMVHLVNK	SQEMVHLVNK	2	SQEMVHLVNK2	14228.3	5819.43	9663.86
P26051	P26051	CD44_RAT	Cd44	CD44 antigen	1	SQEMVHLVNK	SQEMVHLVNK	3	SQEMVHLVNK3	71427	79487.1	71016.5
P26051	P26051	CD44_RAT	Cd44	CD44 antigen	1	SQEMVHLVNKEPTETPDQFMTADETR	SQEMVHLVNKEPTETPDQFMTADETR	4	SQEMVHLVNKEPTETPDQFMTADETR4	986107	1.06551e+06	1.19431e+06
Q9JKC9	Q9JKC9	SYNRG_RAT	Synrg	Synergin gamma	1	SQENTCPSPASSVASHETPK	SQENTC(UniMod:4)PSPASSVASHETPK	3	SQENTC(UniMod:4)PSPASSVASHETPK3	1096.21	3476.22	
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	SQEPATSGCSMEAK	SQEPATSGC(UniMod:4)SMEAK	2	SQEPATSGC(UniMod:4)SMEAK2	30711.2	25682.1	37203
Q9Z1W6	Q9Z1W6	LYRIC_RAT	Mtdh	Protein LYRIC	1	SQEPISNDQK	SQEPISNDQK	2	SQEPISNDQK2	34221.6	27120.9	26707.9
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	SQEQDSLSENAK	SQEQDSLSENAK	2	SQEQDSLSENAK2	18854	12273.3	6389.28
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	SQEQMDNFTLDINTAYAR	SQEQMDNFTLDINTAYAR	3	SQEQMDNFTLDINTAYAR3	12856	11580.8	11596.7
P08721	P08721	OSTP_RAT	Spp1	Osteopontin	1	SQESDEAIK	SQESDEAIK	2	SQESDEAIK2		136180	
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	SQESDGVEYIFISK	SQESDGVEYIFISK	2	SQESDGVEYIFISK2	14648.2	13577.9	10261.5
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	SQESDGVEYIFISK	SQESDGVEYIFISK	3	SQESDGVEYIFISK3	2051.63	2669.96	5367
Q9WTN5	Q9WTN5	TPC1_RAT	Tpcn1	Two pore calcium channel protein 1	1	SQESEVDSGIVIEK	SQESEVDSGIVIEK	2	SQESEVDSGIVIEK2	3168.85	2703.13	5289.73
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	SQETHSLQLK	SQETHSLQLK	2	SQETHSLQLK2		1255.63	3976.17
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	SQETHSLQLK	SQETHSLQLK	3	SQETHSLQLK3	29696.6	23699.6	26654.1
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	SQETSGVR	SQETSGVR	2	SQETSGVR2			50570.2
P18265	P18265	GSK3A_RAT	Gsk3a	Glycogen synthase kinase-3 alpha	1	SQEVAYTDIK	SQEVAYTDIK	2	SQEVAYTDIK2	7251.94	5604.83	8693.26
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	SQEVSGTEQDTETEVSLVSGQQR	SQEVSGTEQDTETEVSLVSGQQR	3	SQEVSGTEQDTETEVSLVSGQQR3		7915.73	3719.65
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	SQFAYCMLIR	SQFAYC(UniMod:4)MLIR	2	SQFAYC(UniMod:4)MLIR2	41041.2	47958.6	49678.4
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	SQFEELCAELLQK	SQFEELC(UniMod:4)AELLQK	2	SQFEELC(UniMod:4)AELLQK2	3848.09	9149.05	4686.39
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	SQFEELCAELLQK	SQFEELC(UniMod:4)AELLQK	3	SQFEELC(UniMod:4)AELLQK3	3588.9		1769.54
P21533	P21533	RL6_RAT	Rpl6	Large ribosomal subunit protein eL6	1	SQFSLTNGMYPHK	SQFSLTNGMYPHK	3	SQFSLTNGMYPHK3	9411.56	8728.11	5624.46
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	SQFTITPGSEQIR	SQFTITPGSEQIR	2	SQFTITPGSEQIR2	211517	214624	206635
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	SQFTITPGSEQIR	SQFTITPGSEQIR	3	SQFTITPGSEQIR3	9655.31	3489.75	
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	SQFVQPICLPEAGSSFPTGHK	SQFVQPIC(UniMod:4)LPEAGSSFPTGHK	3	SQFVQPIC(UniMod:4)LPEAGSSFPTGHK3	623573	526677	537741
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	SQGAAIGGR	SQGAAIGGR	2	SQGAAIGGR2	35737.3	82213.6	81818.7
O88989	O88989	MDHC_RAT	Mdh1	Malate dehydrogenase, cytoplasmic	1	SQGAALEK	SQGAALEK	1	SQGAALEK1		3146.55	
O88989	O88989	MDHC_RAT	Mdh1	Malate dehydrogenase, cytoplasmic	1	SQGAALEK	SQGAALEK	2	SQGAALEK2	192327	170547	175008
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	SQGACVTPASGC	SQGAC(UniMod:4)VTPASGC(UniMod:4)	2	SQGAC(UniMod:4)VTPASGC(UniMod:4)2	38807.5	34032.4	36599.6
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	SQGADKDLAAK	SQGADKDLAAK	2	SQGADKDLAAK2			1021.25
D3ZDP7	D3ZDP7	D3ZDP7_RAT	Nyap1	Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1	1	SQGAEGLLAR	SQGAEGLLAR	2	SQGAEGLLAR2	1487.7		
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	SQGAIQGRPPYAASAEEVAK	SQGAIQGRPPYAASAEEVAK	3	SQGAIQGRPPYAASAEEVAK3	115495	123113	124071
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	SQGDMQDLNGNNQSVTR	SQGDMQDLNGNNQSVTR	2	SQGDMQDLNGNNQSVTR2	2890.46	5125.34	4779.49
Q9R0Z7	Q9R0Z7	AAGAB_RAT	Aagab	Alpha- and gamma-adaptin-binding protein p34	1	SQGFSLLNSLAGASR	SQGFSLLNSLAGASR	2	SQGFSLLNSLAGASR2	4118.16	5218.2	6856.69
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	SQGGETLDECGLK	SQGGETLDEC(UniMod:4)GLK	2	SQGGETLDEC(UniMod:4)GLK2	8475.94	9178.24	11689.5
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	SQGGVQPIPSQGGK	SQGGVQPIPSQGGK	2	SQGGVQPIPSQGGK2	96299.9	82331.1	81655.7
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	SQGIWSTSCSSR	SQGIWSTSC(UniMod:4)SSR	2	SQGIWSTSC(UniMod:4)SSR2	80488.8	74383	75129
A0A8I5ZMG6	A0A8I5ZMG6	A0A8I5ZMG6_RAT	Ppp2r5e	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	SQGKPIELTPLPLLK	SQGKPIELTPLPLLK	2	SQGKPIELTPLPLLK2	3655.69		4151.84
A0A8I5ZMG6	A0A8I5ZMG6	A0A8I5ZMG6_RAT	Ppp2r5e	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	SQGKPIELTPLPLLK	SQGKPIELTPLPLLK	3	SQGKPIELTPLPLLK3	40006.2	34839.3	39015.7
G3V9I7	G3V9I7	G3V9I7_RAT	Adck5	AarF domain containing kinase 5	1	SQGLAVQDVATK	SQGLAVQDVATK	2	SQGLAVQDVATK2	6467.62	4715.39	3344.33
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	SQGLSLDAVYHCLNR	SQGLSLDAVYHC(UniMod:4)LNR	3	SQGLSLDAVYHC(UniMod:4)LNR3	5366.49	5530.06	
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	SQGLSQLYHNQSQGLLSQLQGQSK	SQGLSQLYHNQSQGLLSQLQGQSK	3	SQGLSQLYHNQSQGLLSQLQGQSK3	23867	26359.3	25528.6
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	SQGMALSLGDK	SQGMALSLGDK	2	SQGMALSLGDK2	182922	258626	220707
Q5U302	Q5U302	Q5U302_RAT	Ctnna1	Catenin alpha 1	1	SQGMASLNLPAVSWK	SQGMASLNLPAVSWK	2	SQGMASLNLPAVSWK2	6762.76	2365.54	
F1LZB0	F1LZB0	F1LZB0_RAT	R3hcc1	R3H domain and coiled-coil containing 1	1	SQGMQSLVNQEEK	SQGMQSLVNQEEK	2	SQGMQSLVNQEEK2	4352.4		925.231
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	SQGPALTASQSVHEQPTK	SQGPALTASQSVHEQPTK	2	SQGPALTASQSVHEQPTK2	12295.4	13220	12580.4
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	SQGPALTASQSVHEQPTK	SQGPALTASQSVHEQPTK	3	SQGPALTASQSVHEQPTK3	503374	443875	421660
D3ZT64	D3ZT64	D3ZT64_RAT	Atg2a	Autophagy related 2A	1	SQGPPMLSAAVR	SQGPPMLSAAVR	2	SQGPPMLSAAVR2	4667.9		4248.28
Q91Y78	Q91Y78	UCHL3_RAT	Uchl3	Ubiquitin carboxyl-terminal hydrolase isozyme L3	1	SQGQDVTSSVYFMK	SQGQDVTSSVYFMK	2	SQGQDVTSSVYFMK2	5720.9	6664.1	
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	SQGQLNEKPLPEGWEMR	SQGQLNEKPLPEGWEMR	3	SQGQLNEKPLPEGWEMR3	60350.1	59588.5	61122.8
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	SQGSGLSSGGAGEGQGPK	SQGSGLSSGGAGEGQGPK	2	SQGSGLSSGGAGEGQGPK2	48347.6	46237.7	44032.9
Q56A18	Q56A18	SMCE1_RAT	Smarce1	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1	1	SQGSIAPEEEQVANK	SQGSIAPEEEQVANK	2	SQGSIAPEEEQVANK2			4235.68
P36860	P36860	RALB_RAT	Ralb	Ras-related protein Ral-B	1	SQGSLVLHK	SQGSLVLHK	2	SQGSLVLHK2	139636	106545	96794.4
D3ZDI7	D3ZDI7	D3ZDI7_RAT	Ppp2r5a	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	SQGSQAELHPLPQLK	SQGSQAELHPLPQLK	3	SQGSQAELHPLPQLK3	32850.5	33271.5	38385.7
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	SQGSTSNSDWMK	SQGSTSNSDWMK	2	SQGSTSNSDWMK2	2739.64	7737.84	
F7F9K9	F7F9K9	F7F9K9_RAT	Ndufb8	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial	1	SQHERDPWYEWDHPDLR	SQHERDPWYEWDHPDLR	3	SQHERDPWYEWDHPDLR3	6547.86	4345.15	2259.57
F7F9K9	F7F9K9	F7F9K9_RAT	Ndufb8	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial	1	SQHERDPWYEWDHPDLR	SQHERDPWYEWDHPDLR	4	SQHERDPWYEWDHPDLR4	37391	46775.4	32753.7
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	SQHKEELGAVR	SQHKEELGAVR	2	SQHKEELGAVR2	4896.15		
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	SQHKEELGAVR	SQHKEELGAVR	3	SQHKEELGAVR3	6964.5	1749.59	2687.92
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	SQHLDSDGLAQIFMQYGDHLYSK	SQHLDSDGLAQIFMQYGDHLYSK	4	SQHLDSDGLAQIFMQYGDHLYSK4	6957.44	8635.45	5763.88
A0A8I6A538	A0A8I6A538	A0A8I6A538_RAT	Nin	Ninein	1	SQHLQEELDNR	SQHLQEELDNR	3	SQHLQEELDNR3	4895.8	5065.95	3948.62
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	SQHPYVLTADTLK	SQHPYVLTADTLK	3	SQHPYVLTADTLK3	12968	7678.49	12106.9
D3ZYB4	D3ZYB4	D3ZYB4_RAT	Lpin2	phosphatidate phosphatase	1	SQHQGPDDIYLDDLK	SQHQGPDDIYLDDLK	3	SQHQGPDDIYLDDLK3	9928.84	6741.63	10406.6
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	SQHYALLDNSCR	SQHYALLDNSC(UniMod:4)R	3	SQHYALLDNSC(UniMod:4)R3	3733.28		2503.16
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	SQICDNAALYAQK	SQIC(UniMod:4)DNAALYAQK	2	SQIC(UniMod:4)DNAALYAQK2	3953.21	5878.73	4423.45
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	SQIDELYSTIKI	SQIDELYSTIKI	2	SQIDELYSTIKI2	18391.8	14857.8	14666.6
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	SQIESMLINGYALNCVVGSQGMLK	SQIESMLINGYALNC(UniMod:4)VVGSQGMLK	3	SQIESMLINGYALNC(UniMod:4)VVGSQGMLK3	9276.5	12503.2	6965.25
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	SQIFSTASDNQPTVTIK	SQIFSTASDNQPTVTIK	2	SQIFSTASDNQPTVTIK2	1.407e+06	1.33611e+06	1.30267e+06
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	SQIFSTASDNQPTVTIK	SQIFSTASDNQPTVTIK	3	SQIFSTASDNQPTVTIK3	998856	1.01368e+06	1.01396e+06
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	SQIHDIVLVGGSTR	SQIHDIVLVGGSTR	2	SQIHDIVLVGGSTR2	162649	174011	176991
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	SQIHDIVLVGGSTR	SQIHDIVLVGGSTR	3	SQIHDIVLVGGSTR3	144173	143392	123805
A0A8I6ANF5	A0A8I6ANF5	A0A8I6ANF5_RAT	Dffa	DNA fragmentation factor subunit alpha	1	SQILAALK	SQILAALK	2	SQILAALK2	27719.1	28281.8	37929.5
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	SQISADSGVSLASASQR	SQISADSGVSLASASQR	2	SQISADSGVSLASASQR2	2392.11	3203.63	6145.49
Q9ERE6	Q9ERE6	MPRIP_RAT	Mprip	Myosin phosphatase Rho-interacting protein	1	SQISSINSDIEALRR	SQISSINSDIEALRR	3	SQISSINSDIEALRR3	22371.1	13662.7	21493.3
Q4V7D3	Q4V7D3	MACOI_RAT	Maco1	Macoilin	1	SQISSLSSTER	SQISSLSSTER	2	SQISSLSSTER2	2432.03	2748.56	3838.81
Q5GFD9	Q5GFD9	IMPCT_RAT	Impact	Protein IMPACT	1	SQITEPGPDEK	SQITEPGPDEK	2	SQITEPGPDEK2	14203.7	18221.9	9392.39
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	SQIVSGCPPMTHLCEK	SQIVSGC(UniMod:4)PPMTHLC(UniMod:4)EK	3	SQIVSGC(UniMod:4)PPMTHLC(UniMod:4)EK3	11443.7	5985.42	12920.1
A0A8I6ALT5	A0A8I6ALT5	A0A8I6ALT5_RAT	Dok2	Docking protein 2	1	SQKPSGETWR	SQKPSGETWR	3	SQKPSGETWR3	4290.65	18755.4	10918.3
P14046	Q6IE52;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	SQKTPSVTVQSSGSFSQK	SQKTPSVTVQSSGSFSQK	2	SQKTPSVTVQSSGSFSQK2	41523.9	29330.7	52237.5
P14046	Q6IE52;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	SQKTPSVTVQSSGSFSQK	SQKTPSVTVQSSGSFSQK	3	SQKTPSVTVQSSGSFSQK3	286732	237648	281523
P14046	Q6IE52;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	SQKTPSVTVQSSGSFSQKFQVDK	SQKTPSVTVQSSGSFSQKFQVDK	3	SQKTPSVTVQSSGSFSQKFQVDK3	19606.5	9585.89	
P14046	Q6IE52;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	SQKTPSVTVQSSGSFSQKFQVDK	SQKTPSVTVQSSGSFSQKFQVDK	4	SQKTPSVTVQSSGSFSQKFQVDK4	85339.7	60374.4	62831.8
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	SQLAAAAR	SQLAAAAR	1	SQLAAAAR1	2524.08	2858.68	3426.74
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	SQLAAAAR	SQLAAAAR	2	SQLAAAAR2	2.82821e+06	2.95902e+06	3.15609e+06
D3Z8M3	D3Z8M3	D3Z8M3_RAT	Khnyn	KH and NYN domain containing	1	SQLAGGGAEEVAPLK	SQLAGGGAEEVAPLK	2	SQLAGGGAEEVAPLK2	2639.59		
A0A8I6A538	A0A8I6A538	A0A8I6A538_RAT	Nin	Ninein	1	SQLALSQEK	SQLALSQEK	2	SQLALSQEK2	5855.51	6200.84	8033.97
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	SQLCSQSLEITR	SQLC(UniMod:4)SQSLEITR	2	SQLC(UniMod:4)SQSLEITR2	171295	180079	191813
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	SQLDEVHAFQQFNWK	SQLDEVHAFQQFNWK	3	SQLDEVHAFQQFNWK3	6128.83	8479.36	483.141
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	SQLDINNK	SQLDINNK	2	SQLDINNK2	55199.2	56329.3	44510.3
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	SQLDINNKK	SQLDINNKK	2	SQLDINNKK2	8393.85	6302.37	2729.44
Q3MID3	Q3MID3	ARFG2_RAT	Arfgap2	ADP-ribosylation factor GTPase-activating protein 2	1	SQLDLFDDVGTFASGPPK	SQLDLFDDVGTFASGPPK	2	SQLDLFDDVGTFASGPPK2	5878.35	6485.39	10676.9
Q8CG45	Q8CG45	ARK72_RAT	Akr7a2	Aflatoxin B1 aldehyde reductase member 2	1	SQLETSLK	SQLETSLK	2	SQLETSLK2	25039.2	19171.3	27438.2
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	SQLIQPSGPLVVLLPLAGGYSR	SQLIQPSGPLVVLLPLAGGYSR	3	SQLIQPSGPLVVLLPLAGGYSR3	117066	116602	112330
P51799	P51799	CLCN7_RAT	Clcn7	H(+)/Cl(-) exchange transporter 7	1	SQLIVLLK	SQLIVLLK	2	SQLIVLLK2	3755.98		7960.86
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	SQLLAHQFIWNMK	SQLLAHQFIWNMK	3	SQLLAHQFIWNMK3	19940.2	14208.3	16661.2
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	SQLLANR	SQLLANR	2	SQLLANR2	303060	366695	365772
M0RBQ8	M0RBQ8	M0RBQ8_RAT	Dennd1c	DENN/MADD domain containing 1C	1	SQLLASTEPNSDTVQK	SQLLASTEPNSDTVQK	2	SQLLASTEPNSDTVQK2	3637.24	5272.04	3120.68
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	SQLLGSAHEVQR	SQLLGSAHEVQR	2	SQLLGSAHEVQR2	42313.4	52734.3	35266.4
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	SQLLGSAHEVQR	SQLLGSAHEVQR	3	SQLLGSAHEVQR3	747376	844926	848442
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	SQLLILDR	SQLLILDR	2	SQLLILDR2	121563	115014	149735
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	SQLLIMDR	SQLLIMDR	2	SQLLIMDR2	729477	787995	828904
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	SQLLLLACVHR	SQLLLLAC(UniMod:4)VHR	3	SQLLLLAC(UniMod:4)VHR3	4580.51	2587.09	2055.89
P85007	P85007	IR3IP_RAT	Ier3ip1	Immediate early response 3-interacting protein 1	1	SQLLNLIR	SQLLNLIR	2	SQLLNLIR2	94988	142550	110233
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	SQLPGIIAEGR	SQLPGIIAEGR	2	SQLPGIIAEGR2	822458	678008	699056
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	SQLPGIIAEGRDDLFVSDAFHK	SQLPGIIAEGRDDLFVSDAFHK	3	SQLPGIIAEGRDDLFVSDAFHK3	161527	184694	145599
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	SQLPGIIAEGRDDLFVSDAFHK	SQLPGIIAEGRDDLFVSDAFHK	4	SQLPGIIAEGRDDLFVSDAFHK4	107601	80816.1	115309
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	SQLPLEGLDQPACDA	SQLPLEGLDQPAC(UniMod:4)DA	2	SQLPLEGLDQPAC(UniMod:4)DA2	33468.2	28389	38553
F1LR42	F1LR42	F1LR42_RAT	Rufy1	RUN and FYVE domain containing 1	1	SQLPSPGELR	SQLPSPGELR	2	SQLPSPGELR2	11982.9		
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	SQLQDLHR	SQLQDLHR	2	SQLQDLHR2	2025.54	2316.59	
D4AE80	D4AE80	D4AE80_RAT	Dcp1a	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	SQLQDTLIHLIK	SQLQDTLIHLIK	2	SQLQDTLIHLIK2	3567.32	2405.38	1966.21
D4AE80	D4AE80	D4AE80_RAT	Dcp1a	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	SQLQDTLIHLIK	SQLQDTLIHLIK	3	SQLQDTLIHLIK3	5378.74	4555.61	2859.35
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	SQLQEGPPEWK	SQLQEGPPEWK	2	SQLQEGPPEWK2	2.93747e+07	2.26163e+07	2.5571e+07
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	SQLQEGPPEWK	SQLQEGPPEWK	3	SQLQEGPPEWK3	126258	118309	117633
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	SQLQEGPPEWKALTEMR	SQLQEGPPEWKALTEMR	3	SQLQEGPPEWKALTEMR3	82047.3	146192	128255
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	SQLQEGPPEWKALTEMRQMR	SQLQEGPPEWKALTEMRQMR	4	SQLQEGPPEWKALTEMRQMR4	13173.4	22068.8	6751.15
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	SQLQGAMQQFNQR	SQLQGAMQQFNQR	2	SQLQGAMQQFNQR2	17068.5	19578.3	9667.63
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	SQLQGAMQQFNQR	SQLQGAMQQFNQR	3	SQLQGAMQQFNQR3	10325	14476.1	17739.6
Q63528	Q63528	RFA2_RAT	Rpa2	Replication protein A 32 kDa subunit	1	SQLQHMPVASIK	SQLQHMPVASIK	3	SQLQHMPVASIK3	10604.8	3804.17	8593.18
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	SQLQISNNR	SQLQISNNR	2	SQLQISNNR2	18011.1	17292.8	20025.8
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	SQLQITVISAK	SQLQITVISAK	2	SQLQITVISAK2	26112.7	23584.2	21850.9
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	SQLSCVVVDDIER	SQLSC(UniMod:4)VVVDDIER	2	SQLSC(UniMod:4)VVVDDIER2	22973.2	17960	8199.02
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	SQLSCVVVDDIER	SQLSC(UniMod:4)VVVDDIER	3	SQLSC(UniMod:4)VVVDDIER3	12344.1	12185.4	11982.1
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	SQLSPQK	SQLSPQK	1	SQLSPQK1	6480.22		9720.44
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	SQLSPQK	SQLSPQK	2	SQLSPQK2	72304.4		84557.8
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	SQLTEDLGGTLDYCHSR	SQLTEDLGGTLDYC(UniMod:4)HSR	3	SQLTEDLGGTLDYC(UniMod:4)HSR3	26724.4	43695.2	30561.3
Q641X7	Q641X7	FBX25_RAT	Fbxo25	F-box only protein 25	1	SQLTSLSGVAQK	SQLTSLSGVAQK	2	SQLTSLSGVAQK2	2926.51	4789.39	7241.53
Q9QYF3	Q9QYF3	MYO5A_RAT	Myo5a	Unconventional myosin-Va	1	SQLVSQK	SQLVSQK	2	SQLVSQK2		652370	
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	SQLYDDLMDEFMK	SQLYDDLMDEFMK	2	SQLYDDLMDEFMK2	4177.03	13182.9	17680.1
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	SQMAAVEPER	SQMAAVEPER	2	SQMAAVEPER2	1.31908e+06	1.26973e+06	1.32241e+06
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	SQMAAVEPERTPLQR	SQMAAVEPERTPLQR	3	SQMAAVEPERTPLQR3	191340	165508	274772
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	SQMEEPPPPEPPTGPSEAEER	SQMEEPPPPEPPTGPSEAEER	3	SQMEEPPPPEPPTGPSEAEER3	19019.1	21052.3	39793.8
Q641X8	Q641X8;A0A0G2K273	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	0	SQMLAMNIEK	SQMLAMNIEK	2	SQMLAMNIEK2	150133	148119	147068
Q641X8	Q641X8;A0A0G2K273	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	0	SQMLAMNIEKK	SQMLAMNIEKK	3	SQMLAMNIEKK3	3002.27	2908.85	2820.2
Q923V4	Q923V4	FBX6_RAT	Fbxo6	F-box only protein 6	1	SQMVDLK	SQMVDLK	2	SQMVDLK2	89403.4	100350	96560.4
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	SQNEQDTVLDGDFTVR	SQNEQDTVLDGDFTVR	2	SQNEQDTVLDGDFTVR2	305101	298412	286551
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	SQNEQDTVLDGDFTVR	SQNEQDTVLDGDFTVR	3	SQNEQDTVLDGDFTVR3	200833	163089	177237
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	SQNIITDSSSLNAEAIR	SQNIITDSSSLNAEAIR	2	SQNIITDSSSLNAEAIR2	426694	384938	388057
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	SQNIITDSSSLNAEAIR	SQNIITDSSSLNAEAIR	3	SQNIITDSSSLNAEAIR3	105388	94902.4	92136.6
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	SQNIVLSAR	SQNIVLSAR	2	SQNIVLSAR2	24651.1	13538.5	18242.7
P80386	P80386	AAKB1_RAT	Prkab1	5'-AMP-activated protein kinase subunit beta-1	1	SQNNFVAILDLPEGEHQYK	SQNNFVAILDLPEGEHQYK	3	SQNNFVAILDLPEGEHQYK3	19687.7	17805.4	19790.3
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	SQNPHGLK	SQNPHGLK	2	SQNPHGLK2			20292.5
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	SQNQGSLAQGK	SQNQGSLAQGK	2	SQNQGSLAQGK2	2426.55		94511.5
D3ZI07	O55165;D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	0	SQNQQYLVR	SQNQQYLVR	2	SQNQQYLVR2	20432.4	17520.9	32629.4
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	SQNREEQAVLVVR	SQNREEQAVLVVR	3	SQNREEQAVLVVR3	24117.6	32569.2	43009.8
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	SQNSSISGTSGK	SQNSSISGTSGK	2	SQNSSISGTSGK2			3239.95
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	SQNSVLEAIR	SQNSVLEAIR	2	SQNSVLEAIR2	14718	15382.1	17707.9
D4A7I8	D4A7I8	D4A7I8_RAT	Sumf1	Sulfatase modifying factor 1	1	SQNTPDSSASNLGFR	SQNTPDSSASNLGFR	2	SQNTPDSSASNLGFR2	2506.01	3503.42	2229.2
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	SQNVMAAASIANIVK	SQNVMAAASIANIVK	2	SQNVMAAASIANIVK2	133190	113502	113871
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	SQNVMAAASIANIVK	SQNVMAAASIANIVK	3	SQNVMAAASIANIVK3	7162.32		
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	SQNVMEVMDSLDSVCYK	SQNVMEVMDSLDSVC(UniMod:4)YK	3	SQNVMEVMDSLDSVC(UniMod:4)YK3	7818.89	7369.61	9999.37
D4A0T9	D4A0T9	D4A0T9_RAT	Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	1	SQPAPGTFYK	SQPAPGTFYK	2	SQPAPGTFYK2	14392.3	12085.5	12073.5
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	SQPDGVSLR	SQPDGVSLR	2	SQPDGVSLR2	169314	157574	170591
P62944	P62944	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	1	SQPDMAIMAVNSFVK	SQPDMAIMAVNSFVK	2	SQPDMAIMAVNSFVK2	37098.5	53497.1	46168.5
P62944	P62944	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	1	SQPDMAIMAVNSFVK	SQPDMAIMAVNSFVK	3	SQPDMAIMAVNSFVK3	23634.8	18939.1	15290.9
P52303	P52303	AP1B1_RAT	Ap1b1	AP-1 complex subunit beta-1	1	SQPDMAIMAVNTFVK	SQPDMAIMAVNTFVK	2	SQPDMAIMAVNTFVK2	57319.6	78014	69116.6
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	SQPEPAYLDTLNTLK	SQPEPAYLDTLNTLK	2	SQPEPAYLDTLNTLK2	119095	132664	136473
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	SQPEPAYLDTLNTLKK	SQPEPAYLDTLNTLKK	2	SQPEPAYLDTLNTLKK2	2094.16	2855.48	7552.22
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	SQPEPAYLDTLNTLKK	SQPEPAYLDTLNTLKK	3	SQPEPAYLDTLNTLKK3	158755	200993	223053
A0A8I6AML4	A0A8I6AML4	A0A8I6AML4_RAT	Galc	Galactocerebrosidase	1	SQPFPTSYK	SQPFPTSYK	2	SQPFPTSYK2	10966.7	5079.96	12063.1
A0A8I6AEI1	A0A8I6AEI1	A0A8I6AEI1_RAT	Hps1	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1	1	SQPFVGDLR	SQPFVGDLR	2	SQPFVGDLR2	123906	142825	144974
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	SQPHENVVISPHGIASILGMLQLGADGR	SQPHENVVISPHGIASILGMLQLGADGR	3	SQPHENVVISPHGIASILGMLQLGADGR3	14571.5	14896.8	15357.4
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	SQPHENVVISPHGIASILGMLQLGADGR	SQPHENVVISPHGIASILGMLQLGADGR	4	SQPHENVVISPHGIASILGMLQLGADGR4	67539.9	72655.3	61092.7
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	SQPIDDEIYEELPEEEEDTASVK	SQPIDDEIYEELPEEEEDTASVK	3	SQPIDDEIYEELPEEEEDTASVK3	504897	520214	566130
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	SQPPLSVK	SQPPLSVK	2	SQPPLSVK2	41109.2	40038.7	46520.9
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	SQPPQPGDK	SQPPQPGDK	2	SQPPQPGDK2			23977.4
Q5XIL4	Q5XIL4	Q5XIL4_RAT	Sorbs3	Sorbin and SH3 domain containing 3	1	SQPQSLSTPGPTLSHPR	SQPQSLSTPGPTLSHPR	3	SQPQSLSTPGPTLSHPR3	35866.8	36727.4	39917.8
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	SQPSVPGFVQQGFDDLR	SQPSVPGFVQQGFDDLR	2	SQPSVPGFVQQGFDDLR2	16329.6	8680.32	23473.8
A0A8I5ZYW3	A0A8I5ZYW3	A0A8I5ZYW3_RAT	Lsp1	Lymphocyte-specific protein 1	1	SQPTLPISTIDER	SQPTLPISTIDER	2	SQPTLPISTIDER2	95453.6	100129	104122
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	SQPVALPEAR	SQPVALPEAR	2	SQPVALPEAR2	20964	16468.5	20313.5
P0CE43	P0CE43	GRB10_RAT	Grb10	Growth factor receptor-bound protein 10	1	SQPVHIQPLR	SQPVHIQPLR	3	SQPVHIQPLR3	32352.8	29834.3	33585.1
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	SQPVSAIATTAMGSPK	SQPVSAIATTAMGSPK	2	SQPVSAIATTAMGSPK2	861146	938845	848651
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	SQPVSAIATTAMGSPK	SQPVSAIATTAMGSPK	3	SQPVSAIATTAMGSPK3	140108	175459	167841
Q9Z118	Q9Z118	PTBP3_RAT	Ptbp3	Polypyrimidine tract-binding protein 3	1	SQPVYIQYSNHR	SQPVYIQYSNHR	2	SQPVYIQYSNHR2	6848.31	13120.6	3954.4
Q9Z118	Q9Z118	PTBP3_RAT	Ptbp3	Polypyrimidine tract-binding protein 3	1	SQPVYIQYSNHR	SQPVYIQYSNHR	3	SQPVYIQYSNHR3	34271.7	32908.3	24983.2
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	SQPWDPLICSSIFECKPQR	SQPWDPLIC(UniMod:4)SSIFEC(UniMod:4)KPQR	3	SQPWDPLIC(UniMod:4)SSIFEC(UniMod:4)KPQR3	32198.1	47992.2	62413.6
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	SQQAAALAWEK	SQQAAALAWEK	2	SQQAAALAWEK2	99820.3	97364.1	111539
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	SQQAPLAFQAGDK	SQQAPLAFQAGDK	2	SQQAPLAFQAGDK2	76067.6	103684	83390
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	SQQAPLAFQAGDKR	SQQAPLAFQAGDKR	2	SQQAPLAFQAGDKR2	6143.89	6355.64	8314.66
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	SQQAPLAFQAGDKR	SQQAPLAFQAGDKR	3	SQQAPLAFQAGDKR3	24393.2	35460.5	27571
A0A0G2K598	A0A0G2K598	A0A0G2K598_RAT	Tacc2	Transforming, acidic coiled-coil containing protein 2	1	SQQELADALQTGSQR	SQQELADALQTGSQR	2	SQQELADALQTGSQR2	2321.71		
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	SQQELEAK	SQQELEAK	2	SQQELEAK2	169871	164763	172671
A0A0G2K2G7	A0A0G2K2G7	A0A0G2K2G7_RAT	Anks1a	Ankyrin repeat and sterile alpha motif domain containing 1A	1	SQQIAALIEDHMTGR	SQQIAALIEDHMTGR	3	SQQIAALIEDHMTGR3	5521.25	13591.8	4638.44
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	SQQLESLQEIK	SQQLESLQEIK	2	SQQLESLQEIK2	11896.5	11229	23566.5
Q9JK25	Q9JK25	CLIP1_RAT	Clip1	CAP-Gly domain-containing linker protein 1	1	SQQLSALQEENVK	SQQLSALQEENVK	2	SQQLSALQEENVK2	1286.51	3291.84	1553.21
P21708	P21708	MK03_RAT	Mapk3	Mitogen-activated protein kinase 3	1	SQQLSNDHICYFLYQILR	SQQLSNDHIC(UniMod:4)YFLYQILR	3	SQQLSNDHIC(UniMod:4)YFLYQILR3	7074.15	4159.9	1515.5
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	SQQPLKPQVHTPIAPVK	SQQPLKPQVHTPIAPVK	3	SQQPLKPQVHTPIAPVK3	13225.4	6935.41	7676.6
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	SQQPLKPQVHTPIAPVK	SQQPLKPQVHTPIAPVK	4	SQQPLKPQVHTPIAPVK4	22544.6	13537.4	15217.3
D3ZLD5	D3ZLD5	D3ZLD5_RAT	Golga3	Golgin A3	1	SQQPTGSQEMEDLK	SQQPTGSQEMEDLK	2	SQQPTGSQEMEDLK2	17592.3	17423.1	13463.8
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	SQQRPSTVPLPNTQALAMAGPK	SQQRPSTVPLPNTQALAMAGPK	3	SQQRPSTVPLPNTQALAMAGPK3	9111.79	15795.3	12270.9
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	SQQSAGQGLGEAPR	SQQSAGQGLGEAPR	2	SQQSAGQGLGEAPR2	1659.34	1438.3	
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	SQQSAGQGLGEAPRPHYR	SQQSAGQGLGEAPRPHYR	3	SQQSAGQGLGEAPRPHYR3	8141.85	8838.27	20899.3
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	SQQSAGQGLGEAPRPHYR	SQQSAGQGLGEAPRPHYR	4	SQQSAGQGLGEAPRPHYR4	43450.3	43349.2	52930.2
B2RZ27	B2RZ27	SH3L3_RAT	Sh3bgrl3	SH3 domain-binding glutamic acid-rich-like protein 3	1	SQQSEVTR	SQQSEVTR	2	SQQSEVTR2			316356
Q641Z2	Q641Z2	PTN9_RAT	Ptpn9	Tyrosine-protein phosphatase non-receptor type 9	1	SQQSMAVGSLGAR	SQQSMAVGSLGAR	2	SQQSMAVGSLGAR2	2373.2	3987.6	
Q10473	Q10473;Q6UE39	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	0	SQQWLLR	SQQWLLR	2	SQQWLLR2	125695	113912	124432
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	SQREELDAILFIFEK	SQREELDAILFIFEK	3	SQREELDAILFIFEK3		4303.61	
Q3ZAU4	Q3ZAU4	Q3ZAU4_RAT	Kazald1	Kazal-type serine peptidase inhibitor domain 1	1	SQRPLCGSDGR	SQRPLC(UniMod:4)GSDGR	3	SQRPLC(UniMod:4)GSDGR3			89321
Q9JMB5	Q9JMB5	ADRM1_RAT	Adrm1	Proteasomal ubiquitin receptor ADRM1	1	SQSAAVTPSSTTSSAR	SQSAAVTPSSTTSSAR	2	SQSAAVTPSSTTSSAR2	69933	40887.7	40627.2
Q9Z2X5	Q9Z2X5	HOME3_RAT	Homer3	Homer protein homolog 3	1	SQSADAPGPTER	SQSADAPGPTER	2	SQSADAPGPTER2	16600.6	17964.1	11546.6
F7F4L4	F7F4L4	F7F4L4_RAT	Dnajb12	DnaJ heat shock protein family (Hsp40) member B12	1	SQSAGDQSQPTDTTHTTTR	SQSAGDQSQPTDTTHTTTR	3	SQSAGDQSQPTDTTHTTTR3			7746.93
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	SQSASSTDVSIHAPSEATVGHGHELGK	SQSASSTDVSIHAPSEATVGHGHELGK	3	SQSASSTDVSIHAPSEATVGHGHELGK3	2450.72	3378.4	3409.91
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	SQSASSTDVSIHAPSEATVGHGHELGK	SQSASSTDVSIHAPSEATVGHGHELGK	4	SQSASSTDVSIHAPSEATVGHGHELGK4	22560.6	21436.6	20024.8
A0A0G2K543	A0A0G2K543	A0A0G2K543_RAT	C2cd5	C2 calcium-dependent domain containing 5	1	SQSESSDEVTELDLSHGK	SQSESSDEVTELDLSHGK	3	SQSESSDEVTELDLSHGK3	3029.1	4343.65	
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	SQSEYCNVGTK	SQSEYC(UniMod:4)NVGTK	2	SQSEYC(UniMod:4)NVGTK2	9657.84	8469.24	4546.66
Q7TP54	Q7TP54	RIPR2_RAT	Ripor2	Rho family-interacting cell polarization regulator 2	1	SQSFAGFSGLQER	SQSFAGFSGLQER	2	SQSFAGFSGLQER2	7908.6	6405.98	16242.1
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	SQSFPDVEPQLPQAPAR	SQSFPDVEPQLPQAPAR	2	SQSFPDVEPQLPQAPAR2	8145.16	7267.85	
Q66H94	Q66H94	FKBP9_RAT	Fkbp9	Peptidyl-prolyl cis-trans isomerase FKBP9	1	SQSGDFLR	SQSGDFLR	2	SQSGDFLR2	14861	25886.5	25278.7
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	SQSHPDAIEK	SQSHPDAIEK	2	SQSHPDAIEK2	3747.84		6050.27
Q09137	Q09137	AAPK2_RAT	Prkaa2	5'-AMP-activated protein kinase catalytic subunit alpha-2	1	SQSKPYDIMAEVYR	SQSKPYDIMAEVYR	3	SQSKPYDIMAEVYR3	28462.5	21514.5	26727
P23680	P23680	SAMP_RAT	Apcs	Serum amyloid P-component	1	SQSLFSYSVNSR	SQSLFSYSVNSR	2	SQSLFSYSVNSR2	27655.6	25901.8	23892.1
Q66H15	Q66H15	RMD3_RAT	Rmdn3	Regulator of microtubule dynamics protein 3	1	SQSLPNSLDYAQTSER	SQSLPNSLDYAQTSER	2	SQSLPNSLDYAQTSER2	14992	10284.9	13463.7
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	SQSLPTTLLSPVR	SQSLPTTLLSPVR	2	SQSLPTTLLSPVR2	6953.82		10869.9
F1LP90	F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	1	SQSLQDQPTR	SQSLQDQPTR	2	SQSLQDQPTR2	6536.54	5709.24	
F1M8V2	F1M8V2	F1M8V2_RAT	Ube4b	Ubiquitin conjugation factor E4	1	SQSMDIDGVSCEK	SQSMDIDGVSC(UniMod:4)EK	2	SQSMDIDGVSC(UniMod:4)EK2	2920.42	1614.63	4072.9
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	SQSNSVTFGISPAK	SQSNSVTFGISPAK	2	SQSNSVTFGISPAK2	240820	250628	235177
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	SQSPQQEMGGK	SQSPQQEMGGK	2	SQSPQQEMGGK2		12673.7	
P36953	P36953	AFAM_RAT	Afm	Afamin	1	SQSQVMHHICSK	SQSQVMHHIC(UniMod:4)SK	2	SQSQVMHHIC(UniMod:4)SK2	9595.71	8194.62	4471.21
P36953	P36953	AFAM_RAT	Afm	Afamin	1	SQSQVMHHICSK	SQSQVMHHIC(UniMod:4)SK	3	SQSQVMHHIC(UniMod:4)SK3	194001	178443	187142
P54645	P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	1	SQSRPNDIMAEVCR	SQSRPNDIMAEVC(UniMod:4)R	3	SQSRPNDIMAEVC(UniMod:4)R3	29180.9	28412.9	33755.2
F1M8V2	F1M8V2	F1M8V2_RAT	Ube4b	Ubiquitin conjugation factor E4	1	SQSSEGVSSLSSSPSNSLETQSQSLSR	SQSSEGVSSLSSSPSNSLETQSQSLSR	3	SQSSEGVSSLSSSPSNSLETQSQSLSR3	1096.31	1601.19	1923.28
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	SQSSEPPVIHEK	SQSSEPPVIHEK	2	SQSSEPPVIHEK2	9558.11	11774.6	9383.82
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	SQSSEPPVIHEK	SQSSEPPVIHEK	3	SQSSEPPVIHEK3	75874.4	73130.2	86735.5
F1MAL5	F1MAL5	F1MAL5_RAT	Irs2	Insulin receptor substrate 2	1	SQSSGSSATHPISVPGAR	SQSSGSSATHPISVPGAR	3	SQSSGSSATHPISVPGAR3	3703.64	12933.6	4781.28
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	SQSSHSYDDSTLPLIDR	SQSSHSYDDSTLPLIDR	3	SQSSHSYDDSTLPLIDR3	60533.3	66713.4	61240.8
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	SQSSNDTFPTAMHIAAALEVHQVLLPGLQK	SQSSNDTFPTAMHIAAALEVHQVLLPGLQK	4	SQSSNDTFPTAMHIAAALEVHQVLLPGLQK4	45270.6	34715	57216.7
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	SQSSVLHPDGQEVLWDDR	SQSSVLHPDGQEVLWDDR	3	SQSSVLHPDGQEVLWDDR3	65626.8	63249.1	78458.2
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	SQSSVLHPDGQEVLWDDRR	SQSSVLHPDGQEVLWDDRR	3	SQSSVLHPDGQEVLWDDRR3	87420	86579.3	68015.5
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	SQSSVLHPDGQEVLWDDRR	SQSSVLHPDGQEVLWDDRR	4	SQSSVLHPDGQEVLWDDRR4	88239.7	95221.4	95022.5
A0A8I6AEI1	A0A8I6AEI1	A0A8I6AEI1_RAT	Hps1	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1	1	SQSTSVPTR	SQSTSVPTR	2	SQSTSVPTR2	135877	130454	118314
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	SQSTVIPEVQIITLENWETADAIK	SQSTVIPEVQIITLENWETADAIK	3	SQSTVIPEVQIITLENWETADAIK3	9692.1	7077.84	6965.2
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	SQSVRPGADVTFICTAK	SQSVRPGADVTFIC(UniMod:4)TAK	3	SQSVRPGADVTFIC(UniMod:4)TAK3	124172	131081	140518
D4A224	D4A224	D4A224_RAT	Ric1	Protein RIC1 homolog	1	SQSWLSSIGPTHR	SQSWLSSIGPTHR	3	SQSWLSSIGPTHR3	3079.69	6075.88	
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	SQSYVPTSGCRPPSGPSLIK	SQSYVPTSGC(UniMod:4)RPPSGPSLIK	3	SQSYVPTSGC(UniMod:4)RPPSGPSLIK3	179119	178318	162020
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	SQTAELFAK	SQTAELFAK	2	SQTAELFAK2	23994.1	23166.1	21170.8
Q5U2R9	Q5U2R9	Q5U2R9_RAT	Scfd2	Sec1 family domain containing 2	1	SQTAVNDVFTALR	SQTAVNDVFTALR	2	SQTAVNDVFTALR2	12736.3	8890.82	8984.86
Q5M9I5	Q5M9I5	QCR6_RAT	Uqcrh	Cytochrome b-c1 complex subunit 6, mitochondrial	1	SQTEEDCTEELFDFLHAR	SQTEEDC(UniMod:4)TEELFDFLHAR	3	SQTEEDC(UniMod:4)TEELFDFLHAR3	50805.6	40355.3	39454.8
Q5FVN2	Q5FVN2	TM41B_RAT	Tmem41b	Transmembrane protein 41B	1	SQTEMLHSTPAGDR	SQTEMLHSTPAGDR	2	SQTEMLHSTPAGDR2	1855.22	3211.06	3137.66
Q5FVN2	Q5FVN2	TM41B_RAT	Tmem41b	Transmembrane protein 41B	1	SQTEMLHSTPAGDR	SQTEMLHSTPAGDR	3	SQTEMLHSTPAGDR3	57219.6	43716.6	58882.9
O55173	O55173	PDPK1_RAT	Pdpk1	3-phosphoinositide-dependent protein kinase 1	1	SQTEPSSSPGIPSGVSR	SQTEPSSSPGIPSGVSR	2	SQTEPSSSPGIPSGVSR2	4611.72	6205.93	5943.53
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	SQTGVGDQTTQNTR	SQTGVGDQTTQNTR	2	SQTGVGDQTTQNTR2	28184.5		18511.6
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	SQTLMEK	SQTLMEK	2	SQTLMEK2	47799.2	35252.1	30947.3
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	SQTLPVSTWK	SQTLPVSTWK	2	SQTLPVSTWK2	93481.6	108136	84327.5
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	SQTLSQMTVMLCK	SQTLSQMTVMLC(UniMod:4)K	2	SQTLSQMTVMLC(UniMod:4)K2	13871.7	10961.4	17520.6
P14841	P14841	CYTC_RAT	Cst3	Cystatin-C	1	SQTNLTNCPFHDQPHLMR	SQTNLTNC(UniMod:4)PFHDQPHLMR	3	SQTNLTNC(UniMod:4)PFHDQPHLMR3	11547.6	11100.3	10339.6
P14841	P14841	CYTC_RAT	Cst3	Cystatin-C	1	SQTNLTNCPFHDQPHLMR	SQTNLTNC(UniMod:4)PFHDQPHLMR	4	SQTNLTNC(UniMod:4)PFHDQPHLMR4	54838.1	67559.5	47517
P63329	P20651;P63329	PP2BA_RAT	Ppp3ca	Protein phosphatase 3 catalytic subunit alpha	0	SQTTGFPSLITIFSAPNYLDVYNNK	SQTTGFPSLITIFSAPNYLDVYNNK	3	SQTTGFPSLITIFSAPNYLDVYNNK3		8284.6	
Q5PPJ9	Q5PPJ9	SHLB2_RAT	Sh3glb2	Endophilin-B2	1	SQTTYYAQCYR	SQTTYYAQC(UniMod:4)YR	2	SQTTYYAQC(UniMod:4)YR2	12095	12723.3	13547.2
B5DFN2	D3ZWL6;B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	0	SQVDHVIWPDGK	SQVDHVIWPDGK	2	SQVDHVIWPDGK2	11711.4	7612.61	10560.8
B5DFN2	D3ZWL6;B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	0	SQVDHVIWPDGK	SQVDHVIWPDGK	3	SQVDHVIWPDGK3	58209.6	45832.9	59369.9
B5DFN2	D3ZWL6;B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	0	SQVDHVIWPDGKR	SQVDHVIWPDGKR	3	SQVDHVIWPDGKR3	28269.1	22467.7	20771.1
B5DFN2	D3ZWL6;B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	0	SQVDHVIWPDGKR	SQVDHVIWPDGKR	4	SQVDHVIWPDGKR4	27681.8	30394.1	36126
P30427	P30427	PLEC_RAT	Plec	Plectin	1	SQVEEELFSVR	SQVEEELFSVR	2	SQVEEELFSVR2	7988.88	9099.75	6392.32
P53812	P53812	PIPNB_RAT	Pitpnb	Phosphatidylinositol transfer protein beta isoform	1	SQVEPADYK	SQVEPADYK	2	SQVEPADYK2	22684.3	15552.1	13363.3
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	SQVEPETR	SQVEPETR	2	SQVEPETR2	2.78959e+06		2.04938e+06
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	SQVEQLNHQNHQQASFPSQEELQTVISEK	SQVEQLNHQNHQQASFPSQEELQTVISEK	4	SQVEQLNHQNHQQASFPSQEELQTVISEK4	2039.14	7733.89	
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	SQVFSTAADGQTQVEIK	SQVFSTAADGQTQVEIK	2	SQVFSTAADGQTQVEIK2	8064.8	14599.6	8457.07
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	SQVIEGISR	SQVIEGISR	2	SQVIEGISR2	114183	107696	128509
Q3MQ06	Q3MQ06	ATG5_RAT	Atg5	Autophagy protein 5	1	SQVINEMQR	SQVINEMQR	2	SQVINEMQR2	36572.3	37081.8	36976.4
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	SQVISNAK	SQVISNAK	1	SQVISNAK1	17928.6	22269.2	16963.7
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	SQVISNAK	SQVISNAK	2	SQVISNAK2	1.18471e+06	1.21035e+06	1.21087e+06
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	SQVKPIADSLGWQDTGSHITK	SQVKPIADSLGWQDTGSHITK	3	SQVKPIADSLGWQDTGSHITK3	8122.33	7947.95	9599.72
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	SQVKPIADSLGWQDTGSHITK	SQVKPIADSLGWQDTGSHITK	4	SQVKPIADSLGWQDTGSHITK4	34086.8	32110.7	34449.4
O35162	O35162	HSP13_RAT	Hspa13	Heat shock 70 kDa protein 13	1	SQVLFETEVSR	SQVLFETEVSR	2	SQVLFETEVSR2	15244	31216.3	24307.5
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	SQVLFSVSQGAR	SQVLFSVSQGAR	2	SQVLFSVSQGAR2	100157	103885	99829
P15943	P15943	APLP2_RAT	Aplp2	Amyloid beta precursor like protein 2	1	SQVMTHLHVIEER	SQVMTHLHVIEER	2	SQVMTHLHVIEER2	1129.85		
P15943	P15943	APLP2_RAT	Aplp2	Amyloid beta precursor like protein 2	1	SQVMTHLHVIEER	SQVMTHLHVIEER	3	SQVMTHLHVIEER3	36251.7	38169.4	31444.1
P15943	P15943	APLP2_RAT	Aplp2	Amyloid beta precursor like protein 2	1	SQVMTHLHVIEER	SQVMTHLHVIEER	4	SQVMTHLHVIEER4	17866.1	18970.2	20717.8
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	SQVMTHLR	SQVMTHLR	2	SQVMTHLR2	33532.3	24043.9	27483.6
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	SQVSEEEGREVESER	SQVSEEEGREVESER	3	SQVSEEEGREVESER3	48101.6	73080.9	55438
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	SQVSEEEGREVESEREK	SQVSEEEGREVESEREK	3	SQVSEEEGREVESEREK3	22815.9	14095.8	15775.9
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	SQVSEEEGREVESEREK	SQVSEEEGREVESEREK	4	SQVSEEEGREVESEREK4	18942.4	14791.8	21453.8
Q68EJ0	Q68EJ0	NB5R4_RAT	Cyb5r4	Cytochrome b5 reductase 4	1	SQVTDTLPR	SQVTDTLPR	2	SQVTDTLPR2	20468.5	16066.3	16272.9
B2RYW9	B2RYW9	FAHD2_RAT	Fahd2	Fumarylacetoacetate hydrolase domain-containing protein 2	1	SQVTFLAPVTRPDK	SQVTFLAPVTRPDK	2	SQVTFLAPVTRPDK2	6713.85	6267.05	1254.23
B2RYW9	B2RYW9	FAHD2_RAT	Fahd2	Fumarylacetoacetate hydrolase domain-containing protein 2	1	SQVTFLAPVTRPDK	SQVTFLAPVTRPDK	3	SQVTFLAPVTRPDK3	44562	55908.9	51994.8
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	SQVTNYLGIEWMR	SQVTNYLGIEWMR	2	SQVTNYLGIEWMR2	90688	78981.4	76454.8
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	SQVTNYLGIEWMR	SQVTNYLGIEWMR	3	SQVTNYLGIEWMR3	12036.8	10211.4	17858.2
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	SQVVHVAQEAYDSSLPLIK	SQVVHVAQEAYDSSLPLIK	3	SQVVHVAQEAYDSSLPLIK3	99668.9	125081	121505
P04905	P04905;P08009	GSTM1_RAT	Gstm1	Glutathione S-transferase Mu 1	0	SQWLNEK	SQWLNEK	2	SQWLNEK2	50304.4	33360	48241.8
P08010;Q5BK56	P08010;Q5BK56	GSTM2_RAT;GSTM4_RAT	Gstm2;Gstm4	Glutathione S-transferase Mu 2	0	SQWLSEK	SQWLSEK	2	SQWLSEK2	7257.69	10938.4	9484.17
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	SQWNNDNPLFK	SQWNNDNPLFK	2	SQWNNDNPLFK2	127577	124122	145509
P62839	P62839;P61078;P70711	UB2D2_RAT	Ube2d2	Ubiquitin-conjugating enzyme E2 D2	0	SQWSPALTISK	SQWSPALTISK	2	SQWSPALTISK2	76819.6	64951.5	69786.3
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	SQYDYVLPQVSFAAVGYHK	SQYDYVLPQVSFAAVGYHK	3	SQYDYVLPQVSFAAVGYHK3	30833	33543.3	25661.6
F1M9P0	F1M9P0	F1M9P0_RAT	Ap1ar	Adaptor-related protein complex 1 associated regulatory protein	1	SQYEVFR	SQYEVFR	2	SQYEVFR2	10952.9	5961.56	14787.1
Q157S1	Q157S1	CRTC1_RAT	Crtc1	CREB-regulated transcription coactivator 1	1	SQYLQLGPSR	SQYLQLGPSR	2	SQYLQLGPSR2	6709.46	6388.75	7801.1
B0BNB9	B0BNB9	B0BNB9_RAT	Htra2	HtrA serine peptidase 2	1	SQYNFIADVVEK	SQYNFIADVVEK	2	SQYNFIADVVEK2	26913.2	24353.3	33924.8
P98193	P98193	DMP1_RAT	Dmp1	Dentin matrix acidic phosphoprotein 1	1	SQYRPAGGLSK	SQYRPAGGLSK	3	SQYRPAGGLSK3	30598.2	49324.1	66455.2
B2GV55	B2GV55	B2GV55_RAT	Ube2q1	Ubiquitin conjugating enzyme E2 Q1	1	SQYSLTR	SQYSLTR	2	SQYSLTR2	65982.9	74337.4	77586.3
Q6IG05	A0A8I5ZR22;A0A0G2JVA8;A0A8I5ZMI8;A0A0G2JUG1;A0A8I6G380;Q4FZU2;Q6IG05;A0A8I6AP90	K2C75_RAT	Krt75	Keratin, type II cytoskeletal 75	0	SRAEAESWYQTK	SRAEAESWYQTK	3	SRAEAESWYQTK3	13002.2	19507.2	18670.2
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	SRAEASQPQLAQLNEAVQISVHR	SRAEASQPQLAQLNEAVQISVHR	3	SRAEASQPQLAQLNEAVQISVHR3	12594.1	10344.6	12434.6
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	SRAEASQPQLAQLNEAVQISVHR	SRAEASQPQLAQLNEAVQISVHR	4	SRAEASQPQLAQLNEAVQISVHR4	10484.6	14236.8	16951.1
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	SRAEEDTDPNSVHSVPR	SRAEEDTDPNSVHSVPR	2	SRAEEDTDPNSVHSVPR2	5620.93	4527.59	
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	SRAEEDTDPNSVHSVPR	SRAEEDTDPNSVHSVPR	3	SRAEEDTDPNSVHSVPR3	506423	512289	452597
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	SRAEEDTDPNSVHSVPR	SRAEEDTDPNSVHSVPR	4	SRAEEDTDPNSVHSVPR4	774391	978302	958378
F7ELE5	F7ELE5	F7ELE5_RAT	Ndufs7	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial	1	SRAEYVVTK	SRAEYVVTK	2	SRAEYVVTK2	5607.15	7751.01	1603.97
Q6AY41	Q6AY41	CC50A_RAT	Tmem30a	Cell cycle control protein 50A	1	SRDDSQLNGDPSALLNPSK	SRDDSQLNGDPSALLNPSK	3	SRDDSQLNGDPSALLNPSK3	63043.3	45057.2	73510.6
Q6AY41	Q6AY41	CC50A_RAT	Tmem30a	Cell cycle control protein 50A	1	SRDDSQLNGDPSALLNPSKECEPYR	SRDDSQLNGDPSALLNPSKEC(UniMod:4)EPYR	4	SRDDSQLNGDPSALLNPSKEC(UniMod:4)EPYR4		10637.5	12810.3
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	SRDEIVEMIR	SRDEIVEMIR	3	SRDEIVEMIR3	32391.3	31603.2	26410.6
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	SRDESASETSTPSEHSAAPSPQVEVR	SRDESASETSTPSEHSAAPSPQVEVR	4	SRDESASETSTPSEHSAAPSPQVEVR4	6714.03	2985.3	
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	SRDEVQSTLQK	SRDEVQSTLQK	3	SRDEVQSTLQK3	59014.3	61730.9	49256.2
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	SRDEWDK	SRDEWDK	2	SRDEWDK2	20557	28406.4	24092.9
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	SRDFNEECPR	SRDFNEEC(UniMod:4)PR	2	SRDFNEEC(UniMod:4)PR2	4132.43	4401.27	3424.44
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	SRDFNEECPR	SRDFNEEC(UniMod:4)PR	3	SRDFNEEC(UniMod:4)PR3	345245	322161	392020
Q6VBQ5	Q6VBQ5	MYADM_RAT	Myadm	Myeloid-associated differentiation marker	1	SRDHAIAATTFSCVACLAYATEVAWTR	SRDHAIAATTFSC(UniMod:4)VAC(UniMod:4)LAYATEVAWTR	4	SRDHAIAATTFSC(UniMod:4)VAC(UniMod:4)LAYATEVAWTR4	20303.2	6462.72	16677.7
A0A0G2K1A2	D3ZSY4;A0A0G2K1A2	A0A0G2K1A2_RAT	Mpo	Myeloperoxidase	0	SRDHGLPGYNAWR	SRDHGLPGYNAWR	3	SRDHGLPGYNAWR3	16585.4	5722.52	
A0A0G2K1A2	D3ZSY4;A0A0G2K1A2	A0A0G2K1A2_RAT	Mpo	Myeloperoxidase	0	SRDHGLPGYNAWR	SRDHGLPGYNAWR	4	SRDHGLPGYNAWR4	7976.52	11306.2	
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	SRDIWVATGIVSWGIGCGEGYGFYTK	SRDIWVATGIVSWGIGC(UniMod:4)GEGYGFYTK	3	SRDIWVATGIVSWGIGC(UniMod:4)GEGYGFYTK3	10011	10326.3	10760.9
Q0PMD2	Q0PMD2	ANTR1_RAT	Antxr1	Anthrax toxin receptor 1	1	SRDLGAIVYCVGVK	SRDLGAIVYC(UniMod:4)VGVK	3	SRDLGAIVYC(UniMod:4)VGVK3			7195.37
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	SRDMTTGIVENK	SRDMTTGIVENK	2	SRDMTTGIVENK2	3941.64	6338.74	4258.6
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	SRDMTTGIVENK	SRDMTTGIVENK	3	SRDMTTGIVENK3	51423.9	50801.3	45360.6
A0A0U1RS29	A0A0U1RS29	A0A0U1RS29_RAT	Rgl2	Ral guanine nucleotide dissociation stimulator-like 2	1	SRDPEEGGDPGGR	SRDPEEGGDPGGR	3	SRDPEEGGDPGGR3			5228.1
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	SRDQGNDSVSTAPR	SRDQGNDSVSTAPR	3	SRDQGNDSVSTAPR3			30979.6
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	SRDYNPYNYSDSISPFNK	SRDYNPYNYSDSISPFNK	3	SRDYNPYNYSDSISPFNK3		9562.18	3528
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	SREAIDSPVSFLALHNQIR	SREAIDSPVSFLALHNQIR	4	SREAIDSPVSFLALHNQIR4	8884.52	1056.19	6560.27
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	SRECNNPEPQR	SREC(UniMod:4)NNPEPQR	2	SREC(UniMod:4)NNPEPQR2			628.363
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	SRECNNPEPQR	SREC(UniMod:4)NNPEPQR	3	SREC(UniMod:4)NNPEPQR3			9410.66
D3ZRI9	D3ZRI9	D3ZRI9_RAT	Gan	Gigaxonin	1	SREDIQGSEMVTCK	SREDIQGSEMVTC(UniMod:4)K	3	SREDIQGSEMVTC(UniMod:4)K3	15328.9	9599.24	6337.21
Q9WVB1	Q9WVB1	RAB6A_RAT	Rab6a	Ras-related protein Rab-6A	1	SREDMIDIK	SREDMIDIK	2	SREDMIDIK2	288715	235803	245820
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	SREDMTEAEQIIYDR	SREDMTEAEQIIYDR	3	SREDMTEAEQIIYDR3	37085	54019.1	39785.5
Q64617	Q64617	KPCL_RAT	Prkch	Protein kinase C eta type	1	SREDVSNFDPDFIK	SREDVSNFDPDFIK	3	SREDVSNFDPDFIK3		6434.68	4321.23
D3ZY47	D3ZY47	D3ZY47_RAT	C19h1orf198	Similar to RIKEN cDNA 2310022B05	1	SREGHEAEFQSLTPSQIK	SREGHEAEFQSLTPSQIK	4	SREGHEAEFQSLTPSQIK4	10521	11894.1	5464.93
P62138	P62138;P63088;P62142	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	0	SREIFLSQPILLELEAPLK	SREIFLSQPILLELEAPLK	3	SREIFLSQPILLELEAPLK3	73621.6	66062.8	59671.6
Q6YDN7	Q6YDN7	CDC26_RAT	Cdc26	Anaphase-promoting complex subunit CDC26	1	SREQMINDR	SREQMINDR	3	SREQMINDR3		14190.3	
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	SRESLNVDVVK	SRESLNVDVVK	3	SRESLNVDVVK3	6903.42	5009.19	5245.64
O35397	O35397;A0A8I5ZLI0	CASP6_RAT	Casp6	Caspase-6	0	SREVLDPAEQYK	SREVLDPAEQYK	3	SREVLDPAEQYK3	18686	14125.7	20285.6
P04897	P04897	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	1	SREYQLNDSAAYYLNDLER	SREYQLNDSAAYYLNDLER	3	SREYQLNDSAAYYLNDLER3	272616	312594	315289
P08753	P08753	GNAI3_RAT	Gnai3	Guanine nucleotide-binding protein G(i) subunit alpha-3	1	SREYQLNDSASYYLNDLDR	SREYQLNDSASYYLNDLDR	3	SREYQLNDSASYYLNDLDR3	47066.1	43508.6	40235.5
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	SRFPEHELNVDPQR	SRFPEHELNVDPQR	3	SRFPEHELNVDPQR3	289249	304139	283326
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	SRFPEHELNVDPQR	SRFPEHELNVDPQR	4	SRFPEHELNVDPQR4	674988	824106	744818
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	SRGDCDGVQINNPVTFQVK	SRGDC(UniMod:4)DGVQINNPVTFQVK	3	SRGDC(UniMod:4)DGVQINNPVTFQVK3	39490.9	54107.1	58387.8
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	SRGEMQYMYFK	SRGEMQYMYFK	3	SRGEMQYMYFK3	17031.4	19725.8	34359.3
Q9Z254	Q9Z254	GIPC1_RAT	Gipc1	PDZ domain-containing protein GIPC1	1	SRGPATVEDLPSAFEEK	SRGPATVEDLPSAFEEK	2	SRGPATVEDLPSAFEEK2		1884.43	2722.79
Q9Z254	Q9Z254	GIPC1_RAT	Gipc1	PDZ domain-containing protein GIPC1	1	SRGPATVEDLPSAFEEK	SRGPATVEDLPSAFEEK	3	SRGPATVEDLPSAFEEK3	21792.6	29505.1	28133.4
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	SRGPGAPCQDVDECAR	SRGPGAPC(UniMod:4)QDVDEC(UniMod:4)AR	3	SRGPGAPC(UniMod:4)QDVDEC(UniMod:4)AR3	78560.5	94083.2	97301.6
F1M784	F1M784	F1M784_RAT	Pik3ap1	Phosphoinositide-3-kinase adaptor protein 1	1	SRGPGPTQVDGAPVVTGTPVGILERPPR	SRGPGPTQVDGAPVVTGTPVGILERPPR	4	SRGPGPTQVDGAPVVTGTPVGILERPPR4	24783.6	17911.4	33555.4
P18292	P18292	THRB_RAT	F2	Prothrombin	1	SRGSKENLSPPLGECLLER	SRGSKENLSPPLGEC(UniMod:4)LLER	3	SRGSKENLSPPLGEC(UniMod:4)LLER3	64692.2	58152.9	140407
P18292	P18292	THRB_RAT	F2	Prothrombin	1	SRGSKENLSPPLGECLLER	SRGSKENLSPPLGEC(UniMod:4)LLER	4	SRGSKENLSPPLGEC(UniMod:4)LLER4	88517.8	174857	188468
Q6P767	Q6P767	PTTG_RAT	Pttg1ip	Pituitary tumor-transforming gene 1 protein-interacting protein	1	SRHDEIR	SRHDEIR	2	SRHDEIR2			10198.9
P10818	P10818	CX6A1_RAT	Cox6a1	Cytochrome c oxidase subunit 6A1, mitochondrial	1	SRHEEHERPEFVAYPHLR	SRHEEHERPEFVAYPHLR	4	SRHEEHERPEFVAYPHLR4	82901.1	98991.2	71610.1
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	SRIETEVCR	SRIETEVC(UniMod:4)R	3	SRIETEVC(UniMod:4)R3	2871.36	5233.7	2501.76
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	SRKPGLEELLAGVDSNLLELEATR	SRKPGLEELLAGVDSNLLELEATR	4	SRKPGLEELLAGVDSNLLELEATR4	15163.6	24431	13575.7
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	SRLCNNPTPQFGGK	SRLC(UniMod:4)NNPTPQFGGK	3	SRLC(UniMod:4)NNPTPQFGGK3	40134.2	49367.7	41540.5
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	SRLCNNPTPQFGGKDCVGDVTENQVCNK	SRLC(UniMod:4)NNPTPQFGGKDC(UniMod:4)VGDVTENQVC(UniMod:4)NK	4	SRLC(UniMod:4)NNPTPQFGGKDC(UniMod:4)VGDVTENQVC(UniMod:4)NK4		5107.39	643.217
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	SRLDGTER	SRLDGTER	2	SRLDGTER2			20138.8
P29314	M0RB65;D3ZV50;A0A8I5ZK66;P29314	RS9_RAT	Rps9	Small ribosomal subunit protein uS4	0	SRLDQELK	SRLDQELK	2	SRLDQELK2	12209.8	14084.9	7648.64
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	SRLESQYLTSSLR	SRLESQYLTSSLR	3	SRLESQYLTSSLR3	18241.7	18773.4	31176.6
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	SRLETMNQCWESVLQK	SRLETMNQC(UniMod:4)WESVLQK	3	SRLETMNQC(UniMod:4)WESVLQK3	6158.77	6237.54	3490.13
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	SRLEVAEVNGR	SRLEVAEVNGR	3	SRLEVAEVNGR3	21214.3	14516.5	26434.7
P20650	P20650	PPM1A_RAT	Ppm1a	Protein phosphatase 1A	1	SRLEVTDDLEK	SRLEVTDDLEK	3	SRLEVTDDLEK3	32198.4	31824.4	40107.4
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	SRLPANTADISQR	SRLPANTADISQR	3	SRLPANTADISQR3	2826.76	4702.15	3569.52
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	SRLPASLSEGR	SRLPASLSEGR	2	SRLPASLSEGR2	23087.4	18750.1	24180
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	SRLPASLSEGR	SRLPASLSEGR	3	SRLPASLSEGR3	1.21855e+06	1.31131e+06	1.58282e+06
P20673	P20673	ARLY_RAT	Asl	Argininosuccinate lyase	1	SRNDQVVTDLR	SRNDQVVTDLR	3	SRNDQVVTDLR3	25215.5	20642.5	23881.3
P61980	P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	SRNTDEMVELR	SRNTDEMVELR	3	SRNTDEMVELR3	6614.42	15165	6995.24
A0A0G2KAF4	A0A0G2KAF4	A0A0G2KAF4_RAT	Nfxl1	Nuclear transcription factor, X-box binding-like 1	1	SRPAGCPHPCVLPCHPGK	SRPAGC(UniMod:4)PHPC(UniMod:4)VLPC(UniMod:4)HPGK	4	SRPAGC(UniMod:4)PHPC(UniMod:4)VLPC(UniMod:4)HPGK4	8545.94	15120.3	11236.5
Q4FZV0	Q4FZV0	MANBA_RAT	Manba	Beta-mannosidase	1	SRPFIASSPTNGVK	SRPFIASSPTNGVK	3	SRPFIASSPTNGVK3	11818.1	6136.78	14098.1
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	SRPFTVAASFR	SRPFTVAASFR	3	SRPFTVAASFR3	56304.3	75898.6	85363.2
B1WBN7	B1WBN7	B1WBN7_RAT	Fam20c	FAM20C	1	SRPGESAGGDAGWPNK	SRPGESAGGDAGWPNK	3	SRPGESAGGDAGWPNK3	12878.8	13245.5	13671.8
P56522	P56522	ADRO_RAT	Fdxr	NADPH:adrenodoxin oxidoreductase, mitochondrial	1	SRPIDPSVPFDPK	SRPIDPSVPFDPK	3	SRPIDPSVPFDPK3	13399.3	14407.6	13505.7
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	SRPILQVFVHGESLR	SRPILQVFVHGESLR	3	SRPILQVFVHGESLR3	18710.7	8127.28	15265.2
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	SRPILQVFVHGESLR	SRPILQVFVHGESLR	4	SRPILQVFVHGESLR4	60465	61122.7	69018.6
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	SRPLSVVYVLTR	SRPLSVVYVLTR	3	SRPLSVVYVLTR3	32900.9	33073.1	28497.3
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	SRPQHQVLFYK	SRPQHQVLFYK	2	SRPQHQVLFYK2	2427.5		2575.18
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	SRPQHQVLFYK	SRPQHQVLFYK	3	SRPQHQVLFYK3	11863.3	11908.6	12362.1
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	SRPSSTSSGAVLYGQPLLVSVPK	SRPSSTSSGAVLYGQPLLVSVPK	3	SRPSSTSSGAVLYGQPLLVSVPK3	16587.9	28924.6	22058.1
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	SRPVINILK	SRPVINILK	2	SRPVINILK2	58195.1	56850.9	51650.6
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	SRQDLFAVDTQTGSITSLTAAGSAGSWK	SRQDLFAVDTQTGSITSLTAAGSAGSWK	3	SRQDLFAVDTQTGSITSLTAAGSAGSWK3	7255.86	10020.3	9055.69
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	SRQELEQHSVDTASTSDAVTFITYVQSLK	SRQELEQHSVDTASTSDAVTFITYVQSLK	4	SRQELEQHSVDTASTSDAVTFITYVQSLK4	65080.5	51785.9	59107
A0A0G2K598	A0A0G2K598	A0A0G2K598_RAT	Tacc2	Transforming, acidic coiled-coil containing protein 2	1	SRQELVVGLPSSK	SRQELVVGLPSSK	3	SRQELVVGLPSSK3	3821.56	4738.39	
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	SRQPPLVTGISPNEGIPWTK	SRQPPLVTGISPNEGIPWTK	3	SRQPPLVTGISPNEGIPWTK3	5190.57	7591.59	11300.6
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	SRQPSGAGLCDITEGTVVPEDR	SRQPSGAGLC(UniMod:4)DITEGTVVPEDR	3	SRQPSGAGLC(UniMod:4)DITEGTVVPEDR3	25388.6	22040.6	19128.6
Q5EB81	Q5EB81	NB5R1_RAT	Cyb5r1	NADH-cytochrome b5 reductase 1	1	SRRPQVTLQDPDEK	SRRPQVTLQDPDEK	3	SRRPQVTLQDPDEK3	6133.78	901.076	5223.33
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	SRSDIDVNAAAGAK	SRSDIDVNAAAGAK	3	SRSDIDVNAAAGAK3	8473.36	8122.35	8430.98
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	SRSPGTPAGEGSGSPPK	SRSPGTPAGEGSGSPPK	2	SRSPGTPAGEGSGSPPK2			13829.9
Q6P6Q2	Q6P6Q2	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	1	SRTEAESWYQTK	SRTEAESWYQTK	2	SRTEAESWYQTK2	5310.27	6013.84	7333.27
Q6P6Q2	Q6P6Q2	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	1	SRTEAESWYQTK	SRTEAESWYQTK	3	SRTEAESWYQTK3	78357.2	92225.7	81744.9
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	SRTEQLTDSTEISLLPPDIDR	SRTEQLTDSTEISLLPPDIDR	3	SRTEQLTDSTEISLLPPDIDR3	57486.4	48604.9	69348.8
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	SRTGLEELVLSEMNSPSR	SRTGLEELVLSEMNSPSR	3	SRTGLEELVLSEMNSPSR3	1614.04	4486.58	4457.93
D3Z9K9	D3Z9K9	D3Z9K9_RAT	Gdpd2	Glycerophosphodiester phosphodiesterase domain containing 2	1	SRTGLETAVLLTK	SRTGLETAVLLTK	3	SRTGLETAVLLTK3	4901.62	5444.12	7252.37
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	SRTLDMENFNTEVNIPPGAK	SRTLDMENFNTEVNIPPGAK	3	SRTLDMENFNTEVNIPPGAK3	43156.7	54162.8	58666.3
O70593	O70593	SGTA_RAT	Sgta	Small glutamine-rich tetratricopeptide repeat-containing protein alpha	1	SRTPSASHEEQQE	SRTPSASHEEQQE	2	SRTPSASHEEQQE2			13371.7
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	SRVESTEQLIEIASR	SRVESTEQLIEIASR	3	SRVESTEQLIEIASR3	132051	98384.6	161763
D4A416	D4A416	D4A416_RAT	Clptm1l	CLPTM1-like	1	SRVNEFGESYEEQPK	SRVNEFGESYEEQPK	3	SRVNEFGESYEEQPK3	957.683		
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	SRVQELEAALATAR	SRVQELEAALATAR	3	SRVQELEAALATAR3	1710.15	5949.59	6667.38
P98193	P98193	DMP1_RAT	Dmp1	Dentin matrix acidic phosphoprotein 1	1	SRVSEEDDRGELADSNSR	SRVSEEDDRGELADSNSR	4	SRVSEEDDRGELADSNSR4	6199.18		8729.98
Q9Z2L0	A0A8I5ZUF9;Q9Z2L0;A0A8I6GHL9	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	0	SRVTQSNFAVGYK	SRVTQSNFAVGYK	3	SRVTQSNFAVGYK3	4363.12	670.648	3574.81
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	SRWQSEEAEAEAEEAPR	SRWQSEEAEAEAEEAPR	3	SRWQSEEAEAEAEEAPR3	15424.4	18797.5	11525.7
P19468	P19468	GSH1_RAT	Gclc	Glutamate--cysteine ligase catalytic subunit	1	SRYDSIDSYLSK	SRYDSIDSYLSK	3	SRYDSIDSYLSK3	8789.04		10128.1
F1MA46	F1MA46	F1MA46_RAT	Pcdh12	Protocadherin 12	1	SRYEVSTWENNPPSLHLITLK	SRYEVSTWENNPPSLHLITLK	3	SRYEVSTWENNPPSLHLITLK3	31169.3	37326	36921.1
F1MA46	F1MA46	F1MA46_RAT	Pcdh12	Protocadherin 12	1	SRYEVSTWENNPPSLHLITLK	SRYEVSTWENNPPSLHLITLK	4	SRYEVSTWENNPPSLHLITLK4	60168	75535.6	54949.7
B2RYM1	B2RYM1;G3V862	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	0	SRYQDGVYWAEFR	SRYQDGVYWAEFR	3	SRYQDGVYWAEFR3	20851.6	20468.9	23294
B5DF93	B5DF93	PATL1_RAT	Patl1	Protein PAT1 homolog 1	1	SSAAEEMQGDGPK	SSAAEEMQGDGPK	2	SSAAEEMQGDGPK2	10005.4	16150.3	14306.6
M0R8H5	M0R8H5	M0R8H5_RAT	Lrg1	Leucine-rich alpha-2-glycoprotein 1	1	SSAALNTLVLR	SSAALNTLVLR	2	SSAALNTLVLR2	35599.5	22801.4	32132.3
G3V8D4	G3V8D4	APOC2_RAT	Apoc2	Apolipoprotein C-II	1	SSAAMTTYAGIFTDQLLTLLK	SSAAMTTYAGIFTDQLLTLLK	3	SSAAMTTYAGIFTDQLLTLLK3	552652	155882	60243.8
G3V8D4	G3V8D4	APOC2_RAT	Apoc2	Apolipoprotein C-II	1	SSAAMTTYAGIFTDQLLTLLKGE	SSAAMTTYAGIFTDQLLTLLKGE	3	SSAAMTTYAGIFTDQLLTLLKGE3	347251	44651.9	50945.6
B0BNA1	B0BNA1	SH3Y1_RAT	Sh3yl1	SH3 domain-containing YSC84-like protein 1	1	SSAAVFTYCK	SSAAVFTYC(UniMod:4)K	2	SSAAVFTYC(UniMod:4)K2	6333.16	6345.53	3131.17
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	SSADFLQR	SSADFLQR	2	SSADFLQR2	35152.4	31226.4	28024
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	SSADSNLDDICK	SSADSNLDDIC(UniMod:4)K	2	SSADSNLDDIC(UniMod:4)K2	11752.7	19037.3	8534.64
A0A8I5ZKH1	A0A8I5ZKH1	A0A8I5ZKH1_RAT	Ythdc2	RNA helicase	1	SSADTEFSDGSTAAER	SSADTEFSDGSTAAER	2	SSADTEFSDGSTAAER2	1594.37	1253.25	2774.77
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	SSAEIQPAEQVR	SSAEIQPAEQVR	2	SSAEIQPAEQVR2	30743.6	26664.8	24751.8
A0A8I5ZZ05	A0A8I5ZZ05	A0A8I5ZZ05_RAT	Soga1	Suppressor of glucose, autophagy associated 1	1	SSAELEDQNK	SSAELEDQNK	2	SSAELEDQNK2	1536.61		2610.23
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	SSAEMEDFVLMR	SSAEMEDFVLMR	2	SSAEMEDFVLMR2	4004.2	11983.8	6129.94
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	SSAEVCQLLGSQK	SSAEVC(UniMod:4)QLLGSQK	2	SSAEVC(UniMod:4)QLLGSQK2	66285.2	94678.1	63472.7
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	SSAEVCQLLGSQK	SSAEVC(UniMod:4)QLLGSQK	3	SSAEVC(UniMod:4)QLLGSQK3	3351.02	8791.54	12233.6
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	SSAFCPK	SSAFC(UniMod:4)PK	1	SSAFC(UniMod:4)PK1	7178.26	9316.21	6380.89
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	SSAFCPK	SSAFC(UniMod:4)PK	2	SSAFC(UniMod:4)PK2	651765	649067	755645
D3Z921	D3Z921	D3Z921_RAT	Tal1	TAL bHLH transcription factor 1, erythroid differentiation factor	1	SSAGGGPAGGGGAAR	SSAGGGPAGGGGAAR	2	SSAGGGPAGGGGAAR2			9883.29
D3ZK93	D3ZK93	GSG1L_RAT	Gsg1l	Germ cell-specific gene 1-like protein	1	SSAHEAAELNR	SSAHEAAELNR	2	SSAHEAAELNR2	2261.69	3117.44	5028.15
D3ZK93	D3ZK93	GSG1L_RAT	Gsg1l	Germ cell-specific gene 1-like protein	1	SSAHEAAELNR	SSAHEAAELNR	3	SSAHEAAELNR3	3967.79	3777.99	2656.72
Q6V0K7	Q6V0K7	OIT3_RAT	Oit3	Oncoprotein-induced transcript 3 protein	1	SSAIEVSVPR	SSAIEVSVPR	2	SSAIEVSVPR2	132330	113086	145437
P56932	P56932	2ABD_RAT	Ppp2r2d	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform	1	SSALCDR	SSALC(UniMod:4)DR	2	SSALC(UniMod:4)DR2	21517.4	18788.6	25118.2
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	SSALLHDLR	SSALLHDLR	2	SSALLHDLR2	7630.77	2294.01	3125.83
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	SSALPGMCGSR	SSALPGMC(UniMod:4)GSR	2	SSALPGMC(UniMod:4)GSR2	46720.3	36192.4	45926.2
P30349	P30349	LKHA4_RAT	Lta4h	Leukotriene A-4 hydrolase	1	SSALQWLTPEQTSGK	SSALQWLTPEQTSGK	2	SSALQWLTPEQTSGK2	8163	4027.57	5923.1
Q05096	Q05096	MYO1B_RAT	Myo1b	Unconventional myosin-Ib	1	SSALVIQSYIR	SSALVIQSYIR	2	SSALVIQSYIR2	13898.8	10604.9	4578.05
D3ZU48	D3ZU48	D3ZU48_RAT	Klhdc4	Kelch domain containing 4	1	SSAMLAVK	SSAMLAVK	2	SSAMLAVK2	30589.4	33682.3	24134.5
F7EUW3	F7EUW3	F7EUW3_RAT	C2cd2l	C2CD2-like	1	SSAPEEAGVR	SSAPEEAGVR	2	SSAPEEAGVR2	38280.6	43186.5	48427.6
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	SSAPGECHQVMK	SSAPGEC(UniMod:4)HQVMK	2	SSAPGEC(UniMod:4)HQVMK2	25276	26723.8	24123.2
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	SSAPGECHQVMK	SSAPGEC(UniMod:4)HQVMK	3	SSAPGEC(UniMod:4)HQVMK3	64909.1	67994.4	77072.4
A0A0G2K0G9	A0A0G2K0G9	A0A0G2K0G9_RAT	Rin3	Ras and Rab interactor 3	1	SSAPGTPASSGR	SSAPGTPASSGR	2	SSAPGTPASSGR2			10589.6
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	SSAPSHSMSSR	SSAPSHSMSSR	2	SSAPSHSMSSR2			15612.7
O35314	O35314	SCG1_RAT	Chgb	Secretogranin-1	1	SSAPTITPECR	SSAPTITPEC(UniMod:4)R	2	SSAPTITPEC(UniMod:4)R2	28210.1	34802.8	19312.1
M0RBH1	M0RBH1	M0RBH1_RAT	Apol2	Apolipoprotein L, 2	1	SSAQTEASHLVSTSMVK	SSAQTEASHLVSTSMVK	3	SSAQTEASHLVSTSMVK3	5407.41	4409.88	
Q6AXS5	Q6AXS5	SERB1_RAT	Serbp1	SERPINE1 mRNA-binding protein 1	1	SSASAPDVDDPEAFPALA	SSASAPDVDDPEAFPALA	2	SSASAPDVDDPEAFPALA2	4444.31	4787.34	
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	SSASFNIIEFPYK	SSASFNIIEFPYK	2	SSASFNIIEFPYK2	233948	248348	262527
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	SSASFNIIEFPYK	SSASFNIIEFPYK	3	SSASFNIIEFPYK3	24859.5		
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	SSASFSTTAVSAR	SSASFSTTAVSAR	2	SSASFSTTAVSAR2	22072.3	27720.8	34168.8
A0A8J8Y9Q4	A0A8J8Y9Q4	A0A8J8Y9Q4_RAT	Zfyve19	Zinc finger FYVE-type containing 19	1	SSASQSQGLTHK	SSASQSQGLTHK	2	SSASQSQGLTHK2			10309.7
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	SSATIFGLYSSSDNSK	SSATIFGLYSSSDNSK	2	SSATIFGLYSSSDNSK2	56102.1	61984.5	59767.1
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	SSAVELDGR	SSAVELDGR	2	SSAVELDGR2	23558.1	26802.1	35915.6
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	SSAVPSPCGK	SSAVPSPC(UniMod:4)GK	2	SSAVPSPC(UniMod:4)GK2	70184.6	52611.6	65847.2
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	SSAVVVDAIPVFLEK	SSAVVVDAIPVFLEK	2	SSAVVVDAIPVFLEK2	11531.7	14254.6	9399.84
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	SSAYESLMEIVK	SSAYESLMEIVK	2	SSAYESLMEIVK2	225712	262709	246042
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	SSAYILR	SSAYILR	2	SSAYILR2	151539	157249	165788
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	SSCCCSLGK	SSC(UniMod:4)C(UniMod:4)C(UniMod:4)SLGK	2	SSC(UniMod:4)C(UniMod:4)C(UniMod:4)SLGK2	9909.24	10890.9	8555.11
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	SSCCMGLSR	SSC(UniMod:4)C(UniMod:4)MGLSR	2	SSC(UniMod:4)C(UniMod:4)MGLSR2	10197.8	10383.2	8783.89
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	SSCDLHILDAAIVEK	SSC(UniMod:4)DLHILDAAIVEK	3	SSC(UniMod:4)DLHILDAAIVEK3	8267.75	7185.88	8338.57
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	SSCELEVLLR	SSC(UniMod:4)ELEVLLR	2	SSC(UniMod:4)ELEVLLR2	30863.5	28980.6	31205.2
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	SSCISQHVISEAK	SSC(UniMod:4)ISQHVISEAK	2	SSC(UniMod:4)ISQHVISEAK2	12950.6	11377.7	13851
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	SSCISQHVISEAK	SSC(UniMod:4)ISQHVISEAK	3	SSC(UniMod:4)ISQHVISEAK3	159891	146450	157666
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	SSCLVVR	SSC(UniMod:4)LVVR	2	SSC(UniMod:4)LVVR2	59921.8	53711.4	57385.6
O35217	O35217	MINP1_RAT	Minpp1	Multiple inositol polyphosphate phosphatase 1	1	SSCNLFQDIFLHLDK	SSC(UniMod:4)NLFQDIFLHLDK	2	SSC(UniMod:4)NLFQDIFLHLDK2	10946.1		11507.9
O35217	O35217	MINP1_RAT	Minpp1	Multiple inositol polyphosphate phosphatase 1	1	SSCNLFQDIFLHLDK	SSC(UniMod:4)NLFQDIFLHLDK	3	SSC(UniMod:4)NLFQDIFLHLDK3	5303.94	6299.05	4309.61
Q5U2M6	Q5U2M6	DCAF8_RAT	Dcaf8	DDB1- and CUL4-associated factor 8	1	SSCQIIQFMEGDK	SSC(UniMod:4)QIIQFMEGDK	2	SSC(UniMod:4)QIIQFMEGDK2	5413.3	5156.3	
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	SSCSEFSK	SSC(UniMod:4)SEFSK	2	SSC(UniMod:4)SEFSK2		29609.2	
D4ACF1	D4ACF1	D4ACF1_RAT	Eif4enif1	Eukaryotic translation initiation factor 4E nuclear import factor 1	1	SSCSTPLSQTNR	SSC(UniMod:4)STPLSQTNR	2	SSC(UniMod:4)STPLSQTNR2			2685.05
Q6AXW1	Q6AXW1	GLRX2_RAT	Glrx2	Glutaredoxin-2, mitochondrial	1	SSCSYCSMAK	SSC(UniMod:4)SYC(UniMod:4)SMAK	2	SSC(UniMod:4)SYC(UniMod:4)SMAK2	3652.86	2848.37	1815.01
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	SSCWQPGTR	SSC(UniMod:4)WQPGTR	2	SSC(UniMod:4)WQPGTR2	19006.2	17494	18365.4
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	SSDAVSETSSVSHIEDLEK	SSDAVSETSSVSHIEDLEK	3	SSDAVSETSSVSHIEDLEK3	38446.9	37795.3	26026.5
D3ZSN4	D3ZSN4	D3ZSN4_RAT	Zfp330	Zinc finger protein 330	1	SSDCVIK	SSDC(UniMod:4)VIK	2	SSDC(UniMod:4)VIK2	56307.5	46156.3	66464.6
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	SSDEAVILCK	SSDEAVILC(UniMod:4)K	2	SSDEAVILC(UniMod:4)K2	65382.6	75946.9	69173.9
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	SSDEAYAIAK	SSDEAYAIAK	2	SSDEAYAIAK2	88144.1	96775.8	104807
D3ZBQ1	D3ZBQ1	D3ZBQ1_RAT	Foxo3	Forkhead box O3	1	SSDELDAWTDFR	SSDELDAWTDFR	2	SSDELDAWTDFR2	2346.69	4900.86	2569.37
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	SSDGAKGPQFISR	SSDGAKGPQFISR	2	SSDGAKGPQFISR2	12354.6	7767.15	7268.99
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	SSDGAKGPQFISR	SSDGAKGPQFISR	3	SSDGAKGPQFISR3	216741	313611	251266
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	SSDGAKGPQFISRDWHGVPGK	SSDGAKGPQFISRDWHGVPGK	4	SSDGAKGPQFISRDWHGVPGK4	5337.92	5916.43	8845.19
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	SSDGRPDSGGTLR	SSDGRPDSGGTLR	3	SSDGRPDSGGTLR3	40587.4	51044	42233.9
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	SSDGSLSHEDLAK	SSDGSLSHEDLAK	2	SSDGSLSHEDLAK2	5795.04	4097.28	6782.86
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	SSDGSLSHEDLAK	SSDGSLSHEDLAK	3	SSDGSLSHEDLAK3	36972.7	48999.2	40246.2
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	SSDGTWARPVGK	SSDGTWARPVGK	3	SSDGTWARPVGK3	9628.81	12523.9	3338.06
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	SSDIAQELWEHGEEEASNGELLR	SSDIAQELWEHGEEEASNGELLR	3	SSDIAQELWEHGEEEASNGELLR3	8632.49	4627.83	8313.66
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	SSDIVSCVR	SSDIVSC(UniMod:4)VR	2	SSDIVSC(UniMod:4)VR2	71905.7	85320.9	80760.7
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	SSDKEYSVQSSAR	SSDKEYSVQSSAR	2	SSDKEYSVQSSAR2	7387.72	7622.36	9427.15
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	SSDKEYSVQSSAR	SSDKEYSVQSSAR	3	SSDKEYSVQSSAR3	119023	166529	
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	SSDLEEELK	SSDLEEELK	2	SSDLEEELK2	80175.4	77511.6	77285.7
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	SSDLEEELKNVTNNLK	SSDLEEELKNVTNNLK	2	SSDLEEELKNVTNNLK2	27667.7	27442	33158.5
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	SSDLEEELKNVTNNLK	SSDLEEELKNVTNNLK	3	SSDLEEELKNVTNNLK3	857582	830396	1.02694e+06
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	SSDLFNSDGYGSWR	SSDLFNSDGYGSWR	2	SSDLFNSDGYGSWR2	608097	683140	629859
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	SSDLFNSDGYGSWR	SSDLFNSDGYGSWR	3	SSDLFNSDGYGSWR3	10594.4	4996.19	8784.63
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	SSDLWSLNK	SSDLWSLNK	2	SSDLWSLNK2	71833.3	77047.5	70871.8
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	SSDPLGDTASNLGSAVDELMR	SSDPLGDTASNLGSAVDELMR	3	SSDPLGDTASNLGSAVDELMR3	7940.01	6724.67	9128.32
O08679	O08679	MARK2_RAT	Mark2	Serine/threonine-protein kinase MARK2	1	SSDQAVPAIPTSNSYSK	SSDQAVPAIPTSNSYSK	2	SSDQAVPAIPTSNSYSK2	8559.79	5887.37	7666.25
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	SSDSDESYGEGCIALR	SSDSDESYGEGC(UniMod:4)IALR	2	SSDSDESYGEGC(UniMod:4)IALR2	32299.3	27380.2	19539.6
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	SSDSFPTK	SSDSFPTK	2	SSDSFPTK2	73489.6	57237.8	55908.4
Q62848	Q62848	ARFG1_RAT	Arfgap1	ADP-ribosylation factor GTPase-activating protein 1	1	SSDSWDIWGSGSASNNK	SSDSWDIWGSGSASNNK	2	SSDSWDIWGSGSASNNK2	28755.6	12853.3	14002.8
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	SSDTPSSSSPLNLPEAGSDMEEK	SSDTPSSSSPLNLPEAGSDMEEK	3	SSDTPSSSSPLNLPEAGSDMEEK3	68197	56851.2	89371.8
F1M9Q3	F1M9Q3	F1M9Q3_RAT	Ltn1	E3 ubiquitin-protein ligase listerin	1	SSDVVSPLR	SSDVVSPLR	2	SSDVVSPLR2	6435.73	9252.63	16182.8
Q68FW7	Q68FW7	SYTM_RAT	Tars2	Threonine--tRNA ligase, mitochondrial	1	SSEAPETLQR	SSEAPETLQR	2	SSEAPETLQR2	17659	17579.5	17544.8
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	SSEASQDSELATLR	SSEASQDSELATLR	2	SSEASQDSELATLR2	346800	331689	379437
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	SSEASQDSELATLR	SSEASQDSELATLR	3	SSEASQDSELATLR3	21416.2	31140.7	31042.6
Q3B7U1	Q3B7U1	Q3B7U1_RAT	Maged2	MAGE family member D2	1	SSEAVIWEVLR	SSEAVIWEVLR	2	SSEAVIWEVLR2	17506.9	16346.4	22376.4
Q3B7U1	Q3B7U1	Q3B7U1_RAT	Maged2	MAGE family member D2	1	SSEAVIWEVLRK	SSEAVIWEVLRK	3	SSEAVIWEVLRK3	6208.67	6848.34	6858.78
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	SSEAYVEAMK	SSEAYVEAMK	2	SSEAYVEAMK2	41327.6	46767.2	38520.6
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	SSECLSQASESSK	SSEC(UniMod:4)LSQASESSK	2	SSEC(UniMod:4)LSQASESSK2	15891.9	10850.2	16230.7
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	SSEDLLSALQK	SSEDLLSALQK	2	SSEDLLSALQK2	50761.8	44618.3	59091.6
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	SSEDVPYGTVITYMCYPGSEEGVK	SSEDVPYGTVITYMC(UniMod:4)YPGSEEGVK	3	SSEDVPYGTVITYMC(UniMod:4)YPGSEEGVK3	6825.71	6228.42	9702.27
Q63060	Q63060	GLPK_RAT	Gk	Glycerol kinase	1	SSEEIEK	SSEEIEK	2	SSEEIEK2			19622.7
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	SSEEIESAFR	SSEEIESAFR	2	SSEEIESAFR2	485598	560172	547515
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	SSEELPVDIILASVG	SSEELPVDIILASVG	2	SSEELPVDIILASVG2		7767.29	
A0A8I5ZTX9	A0A8I5ZTX9	A0A8I5ZTX9_RAT	C2h1orf162	Hypothetical LOC100363228	1	SSEENSNDLTR	SSEENSNDLTR	2	SSEENSNDLTR2		59922.6	48896.8
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	SSEERDLIESSSYEHGTTFSYVCDDGFR	SSEERDLIESSSYEHGTTFSYVC(UniMod:4)DDGFR	4	SSEERDLIESSSYEHGTTFSYVC(UniMod:4)DDGFR4	46107.5	45354.2	33220.2
A0A8I5ZQE9	A0A8I5ZQE9	A0A8I5ZQE9_RAT	Irf9	Interferon regulatory factor 9	1	SSEFEEVPER	SSEFEEVPER	2	SSEFEEVPER2	13491.6	10975.4	7746.92
D4A7V9	D4A7V9	E2AK4_RAT	Eif2ak4	eIF-2-alpha kinase GCN2	1	SSEIEILAVDLPK	SSEIEILAVDLPK	2	SSEIEILAVDLPK2	5408.47	4229.24	5450.53
A1L108	A1L108	ARP5L_RAT	Arpc5l	Actin-related protein 2/3 complex subunit 5-like protein	1	SSEIEQAVQSLDR	SSEIEQAVQSLDR	2	SSEIEQAVQSLDR2	45536.9	37114.2	50559
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	SSELAAALLSVYLER	SSELAAALLSVYLER	2	SSELAAALLSVYLER2	59169.5	55221.8	56252.8
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	SSELAAALLSVYLER	SSELAAALLSVYLER	3	SSELAAALLSVYLER3	64332.7	50349.3	55196.3
A0A8I5ZYW3	A0A8I5ZYW3	A0A8I5ZYW3_RAT	Lsp1	Lymphocyte-specific protein 1	1	SSELDEDEGFGDWSQK	SSELDEDEGFGDWSQK	2	SSELDEDEGFGDWSQK2	28192.3	39761.4	35612.9
O08679	O08679	MARK2_RAT	Mark2	Serine/threonine-protein kinase MARK2	1	SSELEGDTITLKPR	SSELEGDTITLKPR	3	SSELEGDTITLKPR3	8923.83	10255.2	5462.64
D3ZRE7	D3ZRE7	D3ZRE7_RAT	Swap70	Switching B-cell complex subunit SWAP70	1	SSELEQYLQR	SSELEQYLQR	2	SSELEQYLQR2	4720.94	3265.91	4596.81
A0A8I5ZM67	A0A8I5ZM67	A0A8I5ZM67_RAT	Borcs7	BLOC-1-related complex subunit 7	1	SSELLGQAAR	SSELLGQAAR	2	SSELLGQAAR2	10034.5	17017.2	16466.9
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	SSELLVR	SSELLVR	2	SSELLVR2	23478.5	12420.7	29611
A0A8I6AJP4	A0A8I6AJP4	A0A8I6AJP4_RAT	Phactr4	Phosphatase and actin regulator 4	1	SSEMEVHVDSK	SSEMEVHVDSK	3	SSEMEVHVDSK3	3902.17	1809.69	870.915
A0A8I5Y868	A0A8I5Y868	A0A8I5Y868_RAT	Klc2	Kinesin light chain	1	SSEMLVR	SSEMLVR	2	SSEMLVR2	7339.18	12685.1	9902.73
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	SSEMNVLIPTEGGDFNEFPVPEQFK	SSEMNVLIPTEGGDFNEFPVPEQFK	3	SSEMNVLIPTEGGDFNEFPVPEQFK3	54436.4	58628	60581.5
A0A0G2K1A2	A0A0G2K1A2	A0A0G2K1A2_RAT	Mpo	Myeloperoxidase	1	SSEMPELTSMHTLFVR	SSEMPELTSMHTLFVR	3	SSEMPELTSMHTLFVR3	12962.1	4520.16	
A0A0G2JSI4	A0A0G2JSI4	A0A0G2JSI4_RAT	Adgre5	Adhesion G protein-coupled receptor E5	1	SSENGYSVAGILSSPNIQK	SSENGYSVAGILSSPNIQK	2	SSENGYSVAGILSSPNIQK2	57157.1	52095.2	51240.4
A0A0G2JSI4	A0A0G2JSI4	A0A0G2JSI4_RAT	Adgre5	Adhesion G protein-coupled receptor E5	1	SSENGYSVAGILSSPNIQK	SSENGYSVAGILSSPNIQK	3	SSENGYSVAGILSSPNIQK3	36771.6	37580.3	43720.2
A0A8I5ZSR7	A0A8I5ZSR7	A0A8I5ZSR7_RAT	ENSRNOG00000070662	Ig-like domain-containing protein	1	SSENLYSSTYK	SSENLYSSTYK	2	SSENLYSSTYK2	13303.5	14102	16553.8
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	SSENPNEVFR	SSENPNEVFR	2	SSENPNEVFR2	360524	394082	349392
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	SSENSSSEGNALR	SSENSSSEGNALR	2	SSENSSSEGNALR2		18966.9	
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	SSEPEEIIPSR	SSEPEEIIPSR	2	SSEPEEIIPSR2	24578.6	20157.5	18192.3
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	SSEPLTR	SSEPLTR	2	SSEPLTR2	1.56307e+06	1.66084e+06	1.7389e+06
P19814	P19814	TGON3_RAT	Ttgn1	Trans-Golgi network integral membrane protein TGN38	1	SSEPTEDVETK	SSEPTEDVETK	2	SSEPTEDVETK2	73408.5	73571.1	83459.4
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	SSEPVQLTEAETEYFVR	SSEPVQLTEAETEYFVR	3	SSEPVQLTEAETEYFVR3	12660.3	17067.2	11983.5
G3V783	G3V783	G3V783_RAT	Ripk2	Receptor-interacting serine/threonine-protein kinase 2	1	SSERPQPGIAQQWIQSK	SSERPQPGIAQQWIQSK	3	SSERPQPGIAQQWIQSK3	2878.3	4000.74	7466.35
Q9EQG6	Q9EQG6	KDIS_RAT	Kidins220	Kinase D-interacting substrate of 220 kDa	1	SSERPSLFQTDLK	SSERPSLFQTDLK	3	SSERPSLFQTDLK3	9892.3	9989.45	9098.47
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	SSESELCIETPK	SSESELC(UniMod:4)IETPK	2	SSESELC(UniMod:4)IETPK2	11570.4	13338.6	15083.2
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	SSESELPK	SSESELPK	2	SSESELPK2	48139.5	56668.3	51632.3
A0A0G2JXD9	A0A0G2JXD9	A0A0G2JXD9_RAT	Dop1b	DOP1 leucine zipper like protein B	1	SSESLSSAPSSPHR	SSESLSSAPSSPHR	3	SSESLSSAPSSPHR3	7113.99		8431.64
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	SSESSCGLDGDYEDAELNPR	SSESSC(UniMod:4)GLDGDYEDAELNPR	3	SSESSC(UniMod:4)GLDGDYEDAELNPR3	2507.99		
A0A096MJT6	A0A096MJT6	A0A096MJT6_RAT	Bltp1	Similar to RIKEN cDNA D630029K19	1	SSETFGPAGVR	SSETFGPAGVR	2	SSETFGPAGVR2	4302.84	3295.67	2484.52
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	SSETLRK	SSETLRK	2	SSETLRK2			11683.3
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	SSETPVR	SSETPVR	2	SSETPVR2	193725		192222
Q920A6	Q920A6	RISC_RAT	Scpep1	Retinoid-inducible serine carboxypeptidase	1	SSETSAFVK	SSETSAFVK	2	SSETSAFVK2	31290	49261.4	42339.4
B2GV14	B2GV14	B2GV14_RAT	Txlna	Taxilin alpha	1	SSEVFTTFK	SSEVFTTFK	2	SSEVFTTFK2	10701.4	8411.59	13499.8
O35806	O35806	LTBP2_RAT	Ltbp2	Latent-transforming growth factor beta-binding protein 2	1	SSEVYAQLCNVAR	SSEVYAQLC(UniMod:4)NVAR	2	SSEVYAQLC(UniMod:4)NVAR2	1427.89	2647.78	3536.49
P19627	P19627	GNAZ_RAT	Gnaz	Guanine nucleotide-binding protein G(z) subunit alpha	1	SSEYHLEDNAAYYLNDLER	SSEYHLEDNAAYYLNDLER	3	SSEYHLEDNAAYYLNDLER3	114234	119850	108458
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	SSFETTR	SSFETTR	2	SSFETTR2	5587.84	5828.78	2154.18
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	SSFFSLR	SSFFSLR	2	SSFFSLR2	57071.1	59498.2	66041.2
P62963	P62963	PROF1_RAT	Pfn1	Profilin-1	1	SSFFVNGLTLGGQK	SSFFVNGLTLGGQK	2	SSFFVNGLTLGGQK2	1.1292e+06	1.09443e+06	1.07493e+06
P62963	P62963	PROF1_RAT	Pfn1	Profilin-1	1	SSFFVNGLTLGGQK	SSFFVNGLTLGGQK	3	SSFFVNGLTLGGQK3	38991.7	34150.3	42449.4
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	SSFICACR	SSFIC(UniMod:4)AC(UniMod:4)R	2	SSFIC(UniMod:4)AC(UniMod:4)R2	1.96856e+06	2.06313e+06	2.11216e+06
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	SSFIDDAFALAR	SSFIDDAFALAR	2	SSFIDDAFALAR2	47203.2	54134.9	59050.7
F1LVT9	E9PU10;F1LVT9;F7F0H6;D4A2T4	F1LVT9_RAT	RGD1559575	Similar to novel protein	0	SSFINALR	SSFINALR	2	SSFINALR2	351483	320525	332271
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	SSFLASLNPK	SSFLASLNPK	2	SSFLASLNPK2	12396.6	16717.8	17883.5
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	SSFLGESK	SSFLGESK	2	SSFLGESK2	37416.5	39605.4	47997.1
P0C0A1	P0C0A1	VPS25_RAT	Vps25	Vacuolar protein-sorting-associated protein 25	1	SSFLIMWR	SSFLIMWR	2	SSFLIMWR2	8371.94	3437.35	4091.21
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	SSFLVDCSK	SSFLVDC(UniMod:4)SK	2	SSFLVDC(UniMod:4)SK2	12286.4		29858
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	SSFMGWGVLR	SSFMGWGVLR	2	SSFMGWGVLR2	4100.59	8622.16	3302.84
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	SSFREEDNTYR	SSFREEDNTYR	3	SSFREEDNTYR3	56740.7	54876.7	47446.4
Q6AXS5	Q6AXS5	SERB1_RAT	Serbp1	SERPINE1 mRNA-binding protein 1	1	SSFSHYSGLK	SSFSHYSGLK	2	SSFSHYSGLK2	5456.87		5325.84
Q5M9G3	Q5M9G3	CAPR1_RAT	Caprin1	Caprin-1	1	SSFSNTPNSGYTQSQFNAPR	SSFSNTPNSGYTQSQFNAPR	3	SSFSNTPNSGYTQSQFNAPR3	5947.56	10290.3	15304
A0A8J8XL70	A0A8J8XL70	A0A8J8XL70_RAT	Serpinf1	Serpin family F member 1	1	SSFVAPLEK	SSFVAPLEK	1	SSFVAPLEK1	7053.49		9051.31
A0A8J8XL70	A0A8J8XL70	A0A8J8XL70_RAT	Serpinf1	Serpin family F member 1	1	SSFVAPLEK	SSFVAPLEK	2	SSFVAPLEK2	136863	105028	109636
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	SSFVEDK	SSFVEDK	2	SSFVEDK2	12734.6	11059.2	13982.3
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	SSFVFVR	SSFVFVR	2	SSFVFVR2	75588.9	86025.3	99055.8
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	SSFWANSPYR	SSFWANSPYR	2	SSFWANSPYR2	5406.03	3289.03	4635.13
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	SSGAGGSGSGGSGAGGLIGLMK	SSGAGGSGSGGSGAGGLIGLMK	2	SSGAGGSGSGGSGAGGLIGLMK2	17155.2	15253.4	18126.4
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	SSGAGGSGSGGSGAGGLIGLMK	SSGAGGSGSGGSGAGGLIGLMK	3	SSGAGGSGSGGSGAGGLIGLMK3	5186.84	1866.06	5394.07
P11951	P11951	CX6C2_RAT	Cox6c2	Cytochrome c oxidase subunit 6C-2	1	SSGALLPKPQMR	SSGALLPKPQMR	3	SSGALLPKPQMR3	123372	108714	90526.4
P13838	P13838	LEUK_RAT	Spn	Leukosialin (Fragment)	1	SSGAPETDGSGQRPTLTTFFSR	SSGAPETDGSGQRPTLTTFFSR	3	SSGAPETDGSGQRPTLTTFFSR3	459547	585689	506272
Q63678	Q63678	ZA2G_RAT	Azgp1	Zinc-alpha-2-glycoprotein	1	SSGAVWR	SSGAVWR	2	SSGAVWR2	206833	104962	58059.3
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	SSGDIGNR	SSGDIGNR	2	SSGDIGNR2			34967.7
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	SSGDLSSPIR	SSGDLSSPIR	2	SSGDLSSPIR2	56146.8	36537.2	59097.3
O55012	O55012	PICAL_RAT	Picalm	Phosphatidylinositol-binding clathrin assembly protein	1	SSGDVHLPISSDVSTFTTR	SSGDVHLPISSDVSTFTTR	3	SSGDVHLPISSDVSTFTTR3	5155.4		7839.55
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	SSGDYSATFLPGLIPAEK	SSGDYSATFLPGLIPAEK	2	SSGDYSATFLPGLIPAEK2	11754.1	8918.53	7511.09
P62718	P62718;F1M0K6	RL18A_RAT	Rpl18a	Large ribosomal subunit protein eL20	0	SSGEIVYCGQVFEK	SSGEIVYC(UniMod:4)GQVFEK	2	SSGEIVYC(UniMod:4)GQVFEK2	9089.69	7975.95	8094.09
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	SSGESQSEDIEASR	SSGESQSEDIEASR	2	SSGESQSEDIEASR2	3054.16	2298.02	3825.63
Q5FVM3	Q5FVM3	RETR1_RAT	Retreg1	Reticulophagy regulator 1	1	SSGFLSNLLGGH	SSGFLSNLLGGH	2	SSGFLSNLLGGH2	18522.8	34747.3	23069.7
A0A8J8YPH6	A0A8J8YPH6	A0A8J8YPH6_RAT	Hps4	HPS4, biogenesis of lysosomal organelles complex 3 subunit 2	1	SSGFPNPQDCAFSLSGK	SSGFPNPQDC(UniMod:4)AFSLSGK	2	SSGFPNPQDC(UniMod:4)AFSLSGK2	53218	51214.6	50345.6
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	SSGGFVWACK	SSGGFVWAC(UniMod:4)K	2	SSGGFVWAC(UniMod:4)K2	128016	133133	163116
Q9Z254	Q9Z254	GIPC1_RAT	Gipc1	PDZ domain-containing protein GIPC1	1	SSGGHPGSGPQLGTGR	SSGGHPGSGPQLGTGR	3	SSGGHPGSGPQLGTGR3	52967	51057.9	48166.9
A0A8I6APP3	A0A8I6APP3	A0A8I6APP3_RAT	Plekho2	Pleckstrin homology domain containing O2	1	SSGGLLSLWK	SSGGLLSLWK	2	SSGGLLSLWK2	133586	116349	142362
D3ZHQ1	D3ZHQ1	D3ZHQ1_RAT	Dpp8	Dipeptidylpeptidase 8	1	SSGGLPAPSDFK	SSGGLPAPSDFK	2	SSGGLPAPSDFK2		14358.1	17078.5
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	SSGGLTYIAEWK	SSGGLTYIAEWK	2	SSGGLTYIAEWK2	25924.4	26929.6	24233.6
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	SSGHMSNAPGVQIR	SSGHMSNAPGVQIR	2	SSGHMSNAPGVQIR2	249159	232916	215158
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	SSGHMSNAPGVQIR	SSGHMSNAPGVQIR	3	SSGHMSNAPGVQIR3	4.36004e+06	4.7336e+06	4.91566e+06
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	SSGIGDNPGSETTTPR	SSGIGDNPGSETTTPR	2	SSGIGDNPGSETTTPR2	24254	26385.9	11865.3
Q6IV57	Q6IV57	RN141_RAT	Rnf141	RING finger protein 141	1	SSGIVEASR	SSGIVEASR	2	SSGIVEASR2	5855.19	6585.74	11649.8
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	SSGLGADVGSR	SSGLGADVGSR	2	SSGLGADVGSR2	22917.4	30067.4	16533.3
Q1HCL7	Q1HCL7	NAKD2_RAT	Nadk2	NAD kinase 2, mitochondrial	1	SSGLNLCTGTGSK	SSGLNLC(UniMod:4)TGTGSK	2	SSGLNLC(UniMod:4)TGTGSK2	6018.4	6623.12	6658.39
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	SSGLQPQGAPEAR	SSGLQPQGAPEAR	2	SSGLQPQGAPEAR2	25401.1	34945.2	21690
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	SSGLTAVWVAR	SSGLTAVWVAR	2	SSGLTAVWVAR2	162481	191859	166289
D4A7H1	D4A7H1	SL9A9_RAT	Slc9a9	Sodium/hydrogen exchanger 9	1	SSGLTLGK	SSGLTLGK	2	SSGLTLGK2	60233.6	77506.3	77395.8
D4A7F0	D4A7F0	D4A7F0_RAT	Ubr3	E3 ubiquitin-protein ligase	1	SSGLTYPEDK	SSGLTYPEDK	2	SSGLTYPEDK2	6101.58	9507.18	3790.17
G3V673	G3V673	G3V673_RAT	Adamts5	ADAM metallopeptidase with thrombospondin type 1 motif, 5	1	SSGLVQNIDQLYSGGGK	SSGLVQNIDQLYSGGGK	2	SSGLVQNIDQLYSGGGK2	2785.58	3385.37	
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	SSGNEAPQATIDSYSVK	SSGNEAPQATIDSYSVK	2	SSGNEAPQATIDSYSVK2	21048.7	21503.2	17917.5
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	SSGNSADDLANVAVIDGNK	SSGNSADDLANVAVIDGNK	2	SSGNSADDLANVAVIDGNK2	2148.17	5888.36	1922.74
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	SSGPEFLQEVYTAITYHNK	SSGPEFLQEVYTAITYHNK	3	SSGPEFLQEVYTAITYHNK3	18377.5	33717.4	44003.3
D3ZT64	D3ZT64	D3ZT64_RAT	Atg2a	Autophagy related 2A	1	SSGPNRPQNSWR	SSGPNRPQNSWR	3	SSGPNRPQNSWR3	10848.8	17032.7	26645
D3ZQL1	D3ZQL1	D3ZQL1_RAT	Emc7	ER membrane protein complex subunit 7	1	SSGPPSYFIK	SSGPPSYFIK	2	SSGPPSYFIK2	273063	287160	181802
Q6IMY8	Q6IMY8	HNRPU_RAT	Hnrnpu	Heterogeneous nuclear ribonucleoprotein U	1	SSGPTSLFAVTVAPPGAR	SSGPTSLFAVTVAPPGAR	2	SSGPTSLFAVTVAPPGAR2	7627.65	8891.87	9716.76
Q5BJR4	Q5BJR4	PRUN2_RAT	Prune2	Protein prune homolog 2	1	SSGQESESIPEYTAEEER	SSGQESESIPEYTAEEER	3	SSGQESESIPEYTAEEER3	3238.59	4845.33	2049.31
Q5BJR4	Q5BJR4	PRUN2_RAT	Prune2	Protein prune homolog 2	1	SSGQESESIPEYTAEEEREDNR	SSGQESESIPEYTAEEEREDNR	3	SSGQESESIPEYTAEEEREDNR3	17993.2	25029.4	16731
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	SSGQPVTFTDIFGMLIGETLIQNR	SSGQPVTFTDIFGMLIGETLIQNR	3	SSGQPVTFTDIFGMLIGETLIQNR3	8505.35		
B5DFL3	B5DFL3	B5DFL3_RAT	Itgb1bp1	Integrin subunit beta 1 binding protein 1	1	SSGQSNSNLDTCAEFR	SSGQSNSNLDTC(UniMod:4)AEFR	2	SSGQSNSNLDTC(UniMod:4)AEFR2		1744.24	2087.89
A0A8I5Y6A1	A0A8I5Y6A1	A0A8I5Y6A1_RAT	Ablim1	Actin-binding LIM protein 1	1	SSGREEDEEELLR	SSGREEDEEELLR	3	SSGREEDEEELLR3	17577.5	12158.7	11129.7
Q03626	Q6IE52;A0A8I6AG69;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	SSGSLFNNAMK	SSGSLFNNAMK	2	SSGSLFNNAMK2	4.05401e+06	2.59753e+06	2.7473e+06
P14046	P06238;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	SSGSLLNNAMK	SSGSLLNNAMK	2	SSGSLLNNAMK2	840871	727239	636650
Q6URK4	D4A6A2;F1M6C7;Q6URK4;A0A8I6A4C1	ROA3_RAT	Hnrnpa3	Heterogeneous nuclear ribonucleoprotein A3	0	SSGSPYGGGYGSGGGSGGYGSR	SSGSPYGGGYGSGGGSGGYGSR	2	SSGSPYGGGYGSGGGSGGYGSR2	1857.95	8294.89	3806.54
P30836	P30836	LYAM1_RAT	Sell	L-selectin	1	SSGSWSSPSPICQK	SSGSWSSPSPIC(UniMod:4)QK	2	SSGSWSSPSPIC(UniMod:4)QK2	42824.9	41048.6	58660.4
Q99N37	Q99N37	RHG17_RAT	Arhgap17	Rho GTPase-activating protein 17	1	SSGTNFQGLPSK	SSGTNFQGLPSK	2	SSGTNFQGLPSK2	18030.3	11405.5	14894.3
D3ZTW9	D3ZTW9	D3ZTW9_RAT	Exog	Exo/endonuclease G	1	SSGVEPDDYFLSR	SSGVEPDDYFLSR	2	SSGVEPDDYFLSR2	6963.69	9442.34	4303.23
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	SSHETLNVVEEK	SSHETLNVVEEK	3	SSHETLNVVEEK3	15841.7	14035.5	12725.7
Q4KLN7	Q4KLN7	ARFG3_RAT	Arfgap3	ADP-ribosylation factor GTPase-activating protein 3	1	SSHFSSWDDSADSYWK	SSHFSSWDDSADSYWK	3	SSHFSSWDDSADSYWK3	3824.51	3652.67	4029.55
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	SSHLPTEVTEKPQAVPVSFEFTEAK	SSHLPTEVTEKPQAVPVSFEFTEAK	3	SSHLPTEVTEKPQAVPVSFEFTEAK3	2190.75	10107.5	9030.89
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	SSHLPTEVTEKPQAVPVSFEFTEAK	SSHLPTEVTEKPQAVPVSFEFTEAK	4	SSHLPTEVTEKPQAVPVSFEFTEAK4	9883.05	14571	8109.68
F1LWX9	F1LWX9	F1LWX9_RAT	Tmem117	Transmembrane protein 117	1	SSHLTSENLSLHLK	SSHLTSENLSLHLK	4	SSHLTSENLSLHLK4	13096.3	6568.64	5162.56
P22273	P22273	IL6RA_RAT	Il6r	Interleukin-6 receptor subunit alpha	1	SSHNVVFQSLK	SSHNVVFQSLK	2	SSHNVVFQSLK2	15676	13313.6	15925.1
P22273	P22273	IL6RA_RAT	Il6r	Interleukin-6 receptor subunit alpha	1	SSHNVVFQSLK	SSHNVVFQSLK	3	SSHNVVFQSLK3	88263.5	75051.9	94833.1
A0A8I6GLY6	A0A8I6GLY6	A0A8I6GLY6_RAT	Gga1	Golgi associated, gamma adaptin ear containing, ARF binding protein 1	1	SSHPEDLR	SSHPEDLR	2	SSHPEDLR2	5095.61		8189.05
A0A8J8YPH6	A0A8J8YPH6	A0A8J8YPH6_RAT	Hps4	HPS4, biogenesis of lysosomal organelles complex 3 subunit 2	1	SSHSADSQGPSPSADR	SSHSADSQGPSPSADR	3	SSHSADSQGPSPSADR3			4799.9
D4A5K6	D4A5K6	D4A5K6_RAT	Zmpste24	CAAX prenyl protease	1	SSHSNAYFYGFFK	SSHSNAYFYGFFK	2	SSHSNAYFYGFFK2	4950.73		6927.84
D4A5K6	D4A5K6	D4A5K6_RAT	Zmpste24	CAAX prenyl protease	1	SSHSNAYFYGFFK	SSHSNAYFYGFFK	3	SSHSNAYFYGFFK3	41538.1	48084.2	52342.5
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	SSHSTWPVDVSQIK	SSHSTWPVDVSQIK	3	SSHSTWPVDVSQIK3	22211.1	23056.2	20159.5
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	SSHYDELLAAEAR	SSHYDELLAAEAR	2	SSHYDELLAAEAR2	22277.9	17982.3	19380.2
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	SSHYDELLAAEAR	SSHYDELLAAEAR	3	SSHYDELLAAEAR3	113695	92339.7	126925
Q4V884	Q4V884	Q4V884_RAT	Cdc16	CDC16 cell division cycle 16 homolog (S. cerevisiae)	1	SSICLLR	SSIC(UniMod:4)LLR	2	SSIC(UniMod:4)LLR2	42360.3	28571.2	26367.7
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	SSIDSEPALVLGPLK	SSIDSEPALVLGPLK	2	SSIDSEPALVLGPLK2	51352.7	56227.5	64033.5
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	SSIDSEPALVLGPLK	SSIDSEPALVLGPLK	3	SSIDSEPALVLGPLK3	1519.08	3226.59	3568.85
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	SSIELTK	SSIELTK	2	SSIELTK2	52282.4	41603.6	50250.4
P11505	P11505	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	1	SSIHNFMTHPEFR	SSIHNFMTHPEFR	3	SSIHNFMTHPEFR3	7791.93	5673.94	8192.1
P11505	P11505	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	1	SSIHNFMTHPEFR	SSIHNFMTHPEFR	4	SSIHNFMTHPEFR4	19788.4	21588	20466
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	SSIIIVNR	SSIIIVNR	2	SSIIIVNR2	136791	141444	121778
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	SSILHLQEAVR	SSILHLQEAVR	2	SSILHLQEAVR2	1739.82		1064.05
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	SSILHLQEAVR	SSILHLQEAVR	3	SSILHLQEAVR3	6195.35	14849.1	8899.37
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	SSILLDVKPWDDETDMAQLETCVR	SSILLDVKPWDDETDMAQLETC(UniMod:4)VR	3	SSILLDVKPWDDETDMAQLETC(UniMod:4)VR3	228264	206989	165256
B5DEN5	B5DEN5	B5DEN5_RAT	Eef1b2	Elongation factor 1-beta	1	SSILLDVKPWDDETDMTK	SSILLDVKPWDDETDMTK	3	SSILLDVKPWDDETDMTK3	643341	547417	618754
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	SSILLSLIDEK	SSILLSLIDEK	2	SSILLSLIDEK2	6919.61	6506.2	3596.99
D3ZWA8	D3ZWA8	D3ZWA8_RAT	Appl1	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1	1	SSILQAESK	SSILQAESK	2	SSILQAESK2	14271.6	17130.5	14206.4
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	SSILVFDDAPHYK	SSILVFDDAPHYK	3	SSILVFDDAPHYK3	5267.43	3887.02	2399.56
Q5XIA1	Q5XIA1	NCLN_RAT	Ncln	BOS complex subunit NCLN	1	SSIMDVR	SSIMDVR	2	SSIMDVR2	23134.3	14307.1	41091.8
A0A8I5ZRG3	A0A8I5ZRG3	A0A8I5ZRG3_RAT	Frmd4b	FERM domain containing 4B	1	SSINEQFVDTR	SSINEQFVDTR	2	SSINEQFVDTR2	15084.7	10962.9	11989.4
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	SSIPGCGVTFEIVSNIPEDAQGVEER	SSIPGC(UniMod:4)GVTFEIVSNIPEDAQGVEER	3	SSIPGC(UniMod:4)GVTFEIVSNIPEDAQGVEER3	17803.2	23400.4	8645.99
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	SSIRVEEIIPAAR	SSIRVEEIIPAAR	3	SSIRVEEIIPAAR3	8846.17	15038.5	11438.2
Q3MID3	Q3MID3	ARFG2_RAT	Arfgap2	ADP-ribosylation factor GTPase-activating protein 2	1	SSISHSVLSEMQMIEQETPLSAK	SSISHSVLSEMQMIEQETPLSAK	3	SSISHSVLSEMQMIEQETPLSAK3	4146.3	3830.93	3422.24
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	SSISTSPVLPALLENGK	SSISTSPVLPALLENGK	2	SSISTSPVLPALLENGK2	78260.4	63339.7	68900.2
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	SSISTSPVLPALLENGK	SSISTSPVLPALLENGK	3	SSISTSPVLPALLENGK3	8202.84	5742.37	9390.1
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	SSITCTYEGWSDEPTCYDSTK	SSITC(UniMod:4)TYEGWSDEPTC(UniMod:4)YDSTK	3	SSITC(UniMod:4)TYEGWSDEPTC(UniMod:4)YDSTK3	89018.4	79998.1	75471.1
A0A0G2KB61	A0A0G2KB61	A0A0G2KB61_RAT	Ppp1r13b	Protein phosphatase 1, regulatory subunit 13B	1	SSITEPEGPGGPNIQK	SSITEPEGPGGPNIQK	2	SSITEPEGPGGPNIQK2	7164.06	5930.01	
P21533	A0A0G2KBA1;P21533	RL6_RAT	Rpl6	Large ribosomal subunit protein eL6	0	SSITPGTVLIILTGR	SSITPGTVLIILTGR	2	SSITPGTVLIILTGR2	5793.59	12294	9195.67
P21533	A0A0G2KBA1;P21533	RL6_RAT	Rpl6	Large ribosomal subunit protein eL6	0	SSITPGTVLIILTGR	SSITPGTVLIILTGR	3	SSITPGTVLIILTGR3	4466.81	8002.73	5552.86
A0A8I5ZU41	A0A8I5ZU41	A0A8I5ZU41_RAT	Amy1	Alpha-amylase	1	SSIVHLFEWR	SSIVHLFEWR	3	SSIVHLFEWR3	18605.9	16292	5050.62
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	SSIWQFFSR	SSIWQFFSR	2	SSIWQFFSR2	26302.3	30460.7	54516.3
A0A8I6GLJ8	A0A8I6GLJ8	A0A8I6GLJ8_RAT	ENSRNOG00000071091	Ig-like domain-containing protein	1	SSIYLQMNSLK	SSIYLQMNSLK	2	SSIYLQMNSLK2	46034.4	48640	44032
Q9JI03	Q9JI03	CO5A1_RAT	Col5a1	Collagen alpha-1(V) chain	1	SSKEPDVAYR	SSKEPDVAYR	2	SSKEPDVAYR2	4426.1	7352.19	2473.07
Q9JI03	Q9JI03	CO5A1_RAT	Col5a1	Collagen alpha-1(V) chain	1	SSKEPDVAYR	SSKEPDVAYR	3	SSKEPDVAYR3	17806.4	32266.9	25849.6
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	SSKPHEDIIGIR	SSKPHEDIIGIR	3	SSKPHEDIIGIR3	50385	51753.8	46544.4
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	SSKPQELSSGDLK	SSKPQELSSGDLK	2	SSKPQELSSGDLK2	49552.2	41959.1	25819.4
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	SSKPQELSSGDLK	SSKPQELSSGDLK	3	SSKPQELSSGDLK3	211260	268425	269541
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	SSKPSDMSVQVCGHISR	SSKPSDMSVQVC(UniMod:4)GHISR	3	SSKPSDMSVQVC(UniMod:4)GHISR3	2683.11		
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	SSKPSDMSVQVCGHISR	SSKPSDMSVQVC(UniMod:4)GHISR	4	SSKPSDMSVQVC(UniMod:4)GHISR4	3725.44		5982.53
Q4QQV2	Q4QQV2	DOK1_RAT	Dok1	Docking protein 1	1	SSKPTPAPKPQGLILPESGTTAGSGSK	SSKPTPAPKPQGLILPESGTTAGSGSK	3	SSKPTPAPKPQGLILPESGTTAGSGSK3	17794.1	18819.6	18859.4
Q4QQV2	Q4QQV2	DOK1_RAT	Dok1	Docking protein 1	1	SSKPTPAPKPQGLILPESGTTAGSGSK	SSKPTPAPKPQGLILPESGTTAGSGSK	4	SSKPTPAPKPQGLILPESGTTAGSGSK4	7806.41		2968.68
Q3KRD5	Q3KRD5	TOM34_RAT	Tomm34	Mitochondrial import receptor subunit TOM34	1	SSLADISSLLQIEPR	SSLADISSLLQIEPR	2	SSLADISSLLQIEPR2	5199.26	6136.65	
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	SSLAGPEPSLTWAR	SSLAGPEPSLTWAR	2	SSLAGPEPSLTWAR2	11751.1		14276.6
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	SSLATMAHAQSLVEAQPNVDK	SSLATMAHAQSLVEAQPNVDK	3	SSLATMAHAQSLVEAQPNVDK3	93517.7	96345	107531
Q5XI64	Q5XI64	ABHD6_RAT	Abhd6	Monoacylglycerol lipase ABHD6	1	SSLDDLSIVGQVK	SSLDDLSIVGQVK	2	SSLDDLSIVGQVK2	24343.3	36369.2	39904.7
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	SSLDGDIIR	SSLDGDIIR	2	SSLDGDIIR2	35353	29020.5	44769.6
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	SSLEATR	SSLEATR	2	SSLEATR2	62655.6	68814.5	73536.7
A0A8I6GKX8	A0A8I6GKX8	A0A8I6GKX8_RAT	Iqsec2	IQ motif and Sec7 domain ArfGEF 2	1	SSLEDTYGAGDGLK	SSLEDTYGAGDGLK	2	SSLEDTYGAGDGLK2	2721.73		
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	SSLEGPTILDIEK	SSLEGPTILDIEK	2	SSLEGPTILDIEK2	153350	160920	165421
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	SSLESIPLALLPAAAAGASTGEDTAGAGPR	SSLESIPLALLPAAAAGASTGEDTAGAGPR	3	SSLESIPLALLPAAAAGASTGEDTAGAGPR3	8192.23		9814.82
P10716	P10716	CLC4F_RAT	Clec4f	C-type lectin domain family 4 member F	1	SSLEVASADIHSLR	SSLEVASADIHSLR	3	SSLEVASADIHSLR3	15257.8	17328.5	21027.2
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	SSLFLWVR	SSLFLWVR	2	SSLFLWVR2	60500.1	34438.3	41532
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	SSLFLWVRPNGR	SSLFLWVRPNGR	2	SSLFLWVRPNGR2			4086.92
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	SSLFLWVRPNGR	SSLFLWVRPNGR	3	SSLFLWVRPNGR3	1.41374e+06	1.21604e+06	1.29506e+06
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	SSLGDAPSAVSPNLSSGASPASSR	SSLGDAPSAVSPNLSSGASPASSR	3	SSLGDAPSAVSPNLSSGASPASSR3	53558.3	48462.7	65996.6
D3ZWA1	D3ZWA1	D3ZWA1_RAT	Mindy2	Ubiquitin carboxyl-terminal hydrolase	1	SSLGDPTSPSQHGCSAGSDLK	SSLGDPTSPSQHGC(UniMod:4)SAGSDLK	3	SSLGDPTSPSQHGC(UniMod:4)SAGSDLK3	72438.5	93013.4	71586.8
Q9QYM0	Q6Y306;Q9QYM0	MRP5_RAT	Abcc5	ATP-binding cassette sub-family C member 5	0	SSLGMALFR	SSLGMALFR	2	SSLGMALFR2	2831.65	4742.64	3334.47
D3Z9C0	D3Z9C0	D3Z9C0_RAT	Mios	Meiosis regulator for oocyte development	1	SSLGMVESSR	SSLGMVESSR	2	SSLGMVESSR2	12362.2	14377	9717.01
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	SSLGPVGLDK	SSLGPVGLDK	1	SSLGPVGLDK1	3272.95	3403.39	
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	SSLGPVGLDK	SSLGPVGLDK	2	SSLGPVGLDK2	454782	454609	545349
P34064	P34064	PSA5_RAT	Psma5	Proteasome subunit alpha type-5	1	SSLIILK	SSLIILK	1	SSLIILK1	141607	101284	124668
P34064	P34064	PSA5_RAT	Psma5	Proteasome subunit alpha type-5	1	SSLIILK	SSLIILK	2	SSLIILK2	4.13986e+06	4.48861e+06	4.78645e+06
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	SSLINALQGVGADK	SSLINALQGVGADK	2	SSLINALQGVGADK2	53960.2	54996.6	48452.3
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	SSLINALQGVGADKEGTAAPTGVVHTTSER	SSLINALQGVGADKEGTAAPTGVVHTTSER	4	SSLINALQGVGADKEGTAAPTGVVHTTSER4	31370.1	24192.9	18765.2
Q6MG06	Q6MG06	GNL1_RAT	Gnl1	Guanine nucleotide-binding protein-like 1	1	SSLINGLVGR	SSLINGLVGR	2	SSLINGLVGR2	12168.5	12869	19566.9
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	SSLISALFR	SSLISALFR	2	SSLISALFR2	63962.2	59246	44736.5
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	SSLLAENQILMER	SSLLAENQILMER	2	SSLLAENQILMER2	24157.9	24242.9	36568.2
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	SSLLDDLLTESEDMAQR	SSLLDDLLTESEDMAQR	2	SSLLDDLLTESEDMAQR2	8971.49	15389.3	11442.1
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	SSLLDDLLTESEDMAQR	SSLLDDLLTESEDMAQR	3	SSLLDDLLTESEDMAQR3	9848.95	5740.25	11696.5
Q80W57	Q80W57	ABCG2_RAT	Abcg2	Broad substrate specificity ATP-binding cassette transporter ABCG2	1	SSLLDVLAAR	SSLLDVLAAR	2	SSLLDVLAAR2	23361.6	24903.9	18791.7
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	SSLLLDTVTSIPSSR	SSLLLDTVTSIPSSR	2	SSLLLDTVTSIPSSR2	9814.61	8327.4	5061.02
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	SSLLLDTVTSIPSSR	SSLLLDTVTSIPSSR	3	SSLLLDTVTSIPSSR3	4530.35	8798.98	5748.29
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	SSLLSALLAEMDK	SSLLSALLAEMDK	2	SSLLSALLAEMDK2	4694.67	7436.01	3878.98
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	SSLLSALLAEMDKVEGHVTLK	SSLLSALLAEMDKVEGHVTLK	4	SSLLSALLAEMDKVEGHVTLK4	2752.61	1752.95	
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	SSLLSAVLGELPPTSGLVSVHGR	SSLLSAVLGELPPTSGLVSVHGR	3	SSLLSAVLGELPPTSGLVSVHGR3	85788.5	64787.9	57247
Q3B7T9	Q3B7T9	RFIP1_RAT	Rab11fip1	Rab11 family-interacting protein 1	1	SSLLSLVTGK	SSLLSLVTGK	2	SSLLSLVTGK2	17318.3	14842	21724.5
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	SSLLTEK	SSLLTEK	2	SSLLTEK2	40356.7	47502	44320.2
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	SSLMDTADGVPVNSR	SSLMDTADGVPVNSR	2	SSLMDTADGVPVNSR2	22298.7	19029	17618.2
Q9Z2Q7	Q9Z2Q7	STX8_RAT	Stx8	Syntaxin-8	1	SSLMSEEAK	SSLMSEEAK	2	SSLMSEEAK2	46143.9	50334.9	40695
Q641Y0	Q641Y0	OST48_RAT	Ddost	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit	1	SSLNPILFR	SSLNPILFR	2	SSLNPILFR2	406879	393221	414351
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	SSLNSQPPTEEK	SSLNSQPPTEEK	2	SSLNSQPPTEEK2	34318.3	27845	36658.3
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	SSLNSQPPTEEKEIK	SSLNSQPPTEEKEIK	3	SSLNSQPPTEEKEIK3	9222.3	11913.6	11856
B2RYD7	B2RYD7	B2RYD7_RAT	Stt3b	dolichyl-diphosphooligosaccharide--protein glycotransferase	1	SSLNSSPWSGLMALGNSR	SSLNSSPWSGLMALGNSR	2	SSLNSSPWSGLMALGNSR2	6374.47	17401.8	9287
B2RYD7	B2RYD7	B2RYD7_RAT	Stt3b	dolichyl-diphosphooligosaccharide--protein glycotransferase	1	SSLNSSPWSGLMALGNSR	SSLNSSPWSGLMALGNSR	3	SSLNSSPWSGLMALGNSR3	3696.09	6056.42	7740.88
Q5FWU0	Q5FWU0	Q5FWU0_RAT	Wasf2	Wiskott-Aldrich syndrome protein family member	1	SSLPAVSDAR	SSLPAVSDAR	2	SSLPAVSDAR2	360598	423947	365441
A0A8I5ZS69	A0A8I5ZS69	A0A8I5ZS69_RAT	Snx6	Sorting nexin	1	SSLPNFK	SSLPNFK	2	SSLPNFK2	101205	138050	113901
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	SSLQEPSSPGQSR	SSLQEPSSPGQSR	2	SSLQEPSSPGQSR2	9376.55	8769.81	8080.08
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	SSLQESLDLKDK	SSLQESLDLKDK	2	SSLQESLDLKDK2	2978.62	1957.22	3802.77
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	SSLQESLDLKDK	SSLQESLDLKDK	3	SSLQESLDLKDK3	9936.57	13021.9	10658.7
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	SSLQLDPK	SSLQLDPK	2	SSLQLDPK2	44801.1	46541.9	36743.1
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	SSLQSQCLNEVLK	SSLQSQC(UniMod:4)LNEVLK	2	SSLQSQC(UniMod:4)LNEVLK2	140788	168905	164266
Q62784	Q62784	INP4A_RAT	Inpp4a	Inositol polyphosphate-4-phosphatase type I A	1	SSLQVDWHEEEWEK	SSLQVDWHEEEWEK	3	SSLQVDWHEEEWEK3	3752.74		
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	SSLQYSSPAPGGCGDQTLGDLLLTPTR	SSLQYSSPAPGGC(UniMod:4)GDQTLGDLLLTPTR	3	SSLQYSSPAPGGC(UniMod:4)GDQTLGDLLLTPTR3	3711.39	1475.59	6143.93
Q6AXV4	Q6AXV4	SAM50_RAT	Samm50	Sorting and assembly machinery component 50 homolog	1	SSLSHAMVIDSR	SSLSHAMVIDSR	2	SSLSHAMVIDSR2	15021.3	12527.4	3789.42
Q6AXV4	Q6AXV4	SAM50_RAT	Samm50	Sorting and assembly machinery component 50 homolog	1	SSLSHAMVIDSR	SSLSHAMVIDSR	3	SSLSHAMVIDSR3	27905.5	26828.1	17069.3
F1LTX4	F1LTX4	F1LTX4_RAT	Lrrn4	Leucine rich repeat neuronal 4	1	SSLSLLSLAGNPLQALQPR	SSLSLLSLAGNPLQALQPR	3	SSLSLLSLAGNPLQALQPR3	9248.29	10824.5	12953.5
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	SSLSNDISEK	SSLSNDISEK	2	SSLSNDISEK2	19478.2	26238.4	31220.2
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	SSLSSAQADFNQLAELDR	SSLSSAQADFNQLAELDR	2	SSLSSAQADFNQLAELDR2	76936.4	86413.9	93665
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	SSLSSAQADFNQLAELDR	SSLSSAQADFNQLAELDR	3	SSLSSAQADFNQLAELDR3	53231.6	56130.6	54663
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	SSLSSHSHQSQIYR	SSLSSHSHQSQIYR	3	SSLSSHSHQSQIYR3			12337.9
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	SSLSSHSHQSQIYR	SSLSSHSHQSQIYR	4	SSLSSHSHQSQIYR4			3212.74
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	SSLSSSSPSAGDTVTEK	SSLSSSSPSAGDTVTEK	2	SSLSSSSPSAGDTVTEK2	8913.28	6848.9	9425.62
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	SSLTLGLFR	SSLTLGLFR	2	SSLTLGLFR2	39009.4	33058.3	39893.5
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	SSLTPVLGTESDATVK	SSLTPVLGTESDATVK	2	SSLTPVLGTESDATVK2	308324	352688	338227
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	SSLTPVLGTESDATVK	SSLTPVLGTESDATVK	3	SSLTPVLGTESDATVK3		2846.69	6264.52
P63144	P63144;P62483	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	0	SSLVITTK	SSLVITTK	2	SSLVITTK2	156818	144840	124927
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	SSLVLSMLQQMLMEDK	SSLVLSMLQQMLMEDK	2	SSLVLSMLQQMLMEDK2		1914.54	7604.43
A0A8I5ZKS4	A0A8I5ZKS4	A0A8I5ZKS4_RAT	Hycc1	Family with sequence similarity 126, member A	1	SSLVSSLYK	SSLVSSLYK	2	SSLVSSLYK2	19824.7	27346.6	25049.4
F7ELE5	F7ELE5	F7ELE5_RAT	Ndufs7	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial	1	SSLWPMTFGLACCAVEMMHMAAPR	SSLWPMTFGLAC(UniMod:4)C(UniMod:4)AVEMMHMAAPR	3	SSLWPMTFGLAC(UniMod:4)C(UniMod:4)AVEMMHMAAPR3	8798.7	7804.82	4459.92
F1MAM7	F1MAM7	F1MAM7_RAT	Igll1	Immunoglobulin lambda-like polypeptide 1	1	SSLWTLPGR	SSLWTLPGR	2	SSLWTLPGR2	6471.28	3506.55	
P11505	P11505;P11506	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	0	SSLYEGLEKPESR	SSLYEGLEKPESR	3	SSLYEGLEKPESR3	20173.2	15957.5	22523.5
A0A8I6AD89	A0A8I6AD89	A0A8I6AD89_RAT	ENSRNOG00000064245	Ig-like domain-containing protein	1	SSLYLQMDSLR	SSLYLQMDSLR	2	SSLYLQMDSLR2	388449	357965	393236
M0R8P6	M0R8P6	M0R8P6_RAT	Wwc3	Uncharacterized protein	1	SSMAELMAR	SSMAELMAR	2	SSMAELMAR2	1435.99		
Q07969	Q07969	CD36_RAT	Cd36	Platelet glycoprotein 4	1	SSMFQTR	SSMFQTR	2	SSMFQTR2	44843.4	39672.3	38470.1
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	SSMHLQLTCFQAASPTVMK	SSMHLQLTC(UniMod:4)FQAASPTVMK	3	SSMHLQLTC(UniMod:4)FQAASPTVMK3	7796.99	12738.6	12934.9
P01026	P01026	CO3_RAT	C3	Complement C3	1	SSMILDICTR	SSMILDIC(UniMod:4)TR	2	SSMILDIC(UniMod:4)TR2	354369	279898	224678
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	SSMLFDTMQHHLALSR	SSMLFDTMQHHLALSR	3	SSMLFDTMQHHLALSR3	15212.4	10978.1	10467.6
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	SSMLFDTMQHHLALSR	SSMLFDTMQHHLALSR	4	SSMLFDTMQHHLALSR4	7761.15	15697	6833
D3ZJR7	D3ZJR7	D3ZJR7_RAT	Dsc2	Desmocollin 2	1	SSMSTATVTVNVK	SSMSTATVTVNVK	2	SSMSTATVTVNVK2	43177.5	43934.7	32939.8
Q63965	Q63965	SFXN1_RAT	Sfxn1	Sideroflexin-1	1	SSMSVTSLEDDLQASIQK	SSMSVTSLEDDLQASIQK	2	SSMSVTSLEDDLQASIQK2	66871.4	56339.3	66651.7
Q63965	Q63965	SFXN1_RAT	Sfxn1	Sideroflexin-1	1	SSMSVTSLEDDLQASIQK	SSMSVTSLEDDLQASIQK	3	SSMSVTSLEDDLQASIQK3	55178.8	51436.5	52674.5
Q6AYT3	Q6AYT3;A0A8I5YBA4	RTCB_RAT	Rtcb	RNA-splicing ligase RtcB homolog	0	SSMTFLTR	SSMTFLTR	2	SSMTFLTR2	25812.3	29009.7	30108.9
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SSMVDKIFEGNSNTK	SSMVDKIFEGNSNTK	3	SSMVDKIFEGNSNTK3	13844.5	17224	25052.6
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	SSMVQVANITQAGLTHGINLAVAK	SSMVQVANITQAGLTHGINLAVAK	3	SSMVQVANITQAGLTHGINLAVAK3	32676	42101	40660.7
P08460	P08460	NID1_RAT	Nid1	Nidogen-1 (Fragment)	1	SSNAGHQGVWVFEIGSPATAK	SSNAGHQGVWVFEIGSPATAK	3	SSNAGHQGVWVFEIGSPATAK3	950984	1.0115e+06	1.01181e+06
P08460	P08460	NID1_RAT	Nid1	Nidogen-1 (Fragment)	1	SSNAGHQGVWVFEIGSPATAK	SSNAGHQGVWVFEIGSPATAK	4	SSNAGHQGVWVFEIGSPATAK4	1811.54	526	
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	SSNAVYR	SSNAVYR	2	SSNAVYR2	36433	29919.5	42778.1
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	SSNEVLNVIQGNTTVDELMMR	SSNEVLNVIQGNTTVDELMMR	3	SSNEVLNVIQGNTTVDELMMR3	8413.26	12767.2	10809.7
D4ADM2	D4ADM2	D4ADM2_RAT	Pan3	PAN2-PAN3 deadenylation complex subunit PAN3	1	SSNFGYITSCYK	SSNFGYITSC(UniMod:4)YK	2	SSNFGYITSC(UniMod:4)YK2	6566.07	13507.5	6061.82
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	SSNGTFINSQR	SSNGTFINSQR	2	SSNGTFINSQR2	2099.14	4283.81	1635.7
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	SSNLAQQAPVR	SSNLAQQAPVR	2	SSNLAQQAPVR2	121667	130331	137851
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	SSNLDEQQELVERDEEK	SSNLDEQQELVERDEEK	3	SSNLDEQQELVERDEEK3	76929	51393.1	39820.3
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	SSNLVSANR	SSNLVSANR	2	SSNLVSANR2	1.43725e+06	1.3447e+06	1.30539e+06
Q3SWS8	Q3SWS8	RAE1L_RAT	Rae1	mRNA export factor	1	SSNPMMVLQLPER	SSNPMMVLQLPER	2	SSNPMMVLQLPER2	16504	21200.4	18684.4
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SSNSGLLGPTLYAEVGDTIK	SSNSGLLGPTLYAEVGDTIK	3	SSNSGLLGPTLYAEVGDTIK3	1.16494e+06	1.26894e+06	1.32883e+06
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	SSNSSENQQFLK	SSNSSENQQFLK	2	SSNSSENQQFLK2	12748.5	9881.91	11366.8
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	SSNSSSVGTEVTETPAHSAPHTR	SSNSSSVGTEVTETPAHSAPHTR	4	SSNSSSVGTEVTETPAHSAPHTR4	12046	12715.3	11276.2
A0A8I6AI27;A0A8I6AJQ0	A0A8I6AI27;A0A8I6AJQ0;A0A8I6A3A5;A0A8I6AP43	A0A8I6AI27_RAT;A0A8I6AJQ0_RAT	ENSRNOG00000063171;ENSRNOG00000065115	Ig-like domain-containing protein	0	SSNTAYMELSR	SSNTAYMELSR	2	SSNTAYMELSR2	55641.7	43223.7	50463.9
O35112	O35112	CD166_RAT	Alcam	CD166 antigen	1	SSNTYTLTDVR	SSNTYTLTDVR	2	SSNTYTLTDVR2	6740.35	5915.43	4518.99
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	SSNVVPYDFNR	SSNVVPYDFNR	2	SSNVVPYDFNR2	150445	167563	153097
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	SSPAAKPGSTPSRPSSAK	SSPAAKPGSTPSRPSSAK	2	SSPAAKPGSTPSRPSSAK2			7491.34
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	SSPAAKPGSTPSRPSSAK	SSPAAKPGSTPSRPSSAK	3	SSPAAKPGSTPSRPSSAK3			47132.7
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	SSPAAKPGSTPSRPSSAK	SSPAAKPGSTPSRPSSAK	4	SSPAAKPGSTPSRPSSAK4			19942.1
P97697	P97697	IMPA1_RAT	Impa1	Inositol monophosphatase 1	1	SSPADLVTVTDQK	SSPADLVTVTDQK	2	SSPADLVTVTDQK2	43773.8	36211.5	38568.7
Q9EQH1	Q9EQH1	GAB2_RAT	Gab2	GRB2-associated-binding protein 2	1	SSPAEFSSSQHLLR	SSPAEFSSSQHLLR	3	SSPAEFSSSQHLLR3	16754.7	14550.4	7443.64
P20070	P20070	NB5R3_RAT	Cyb5r3	NADH-cytochrome b5 reductase 3	1	SSPAITLENPDIK	SSPAITLENPDIK	2	SSPAITLENPDIK2	236135	181835	204781
P20070	P20070	NB5R3_RAT	Cyb5r3	NADH-cytochrome b5 reductase 3	1	SSPAITLENPDIKYPLR	SSPAITLENPDIKYPLR	2	SSPAITLENPDIKYPLR2	3289.19	2962.34	3717.09
P20070	P20070	NB5R3_RAT	Cyb5r3	NADH-cytochrome b5 reductase 3	1	SSPAITLENPDIKYPLR	SSPAITLENPDIKYPLR	3	SSPAITLENPDIKYPLR3	56057	60987.7	49273.4
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	SSPATSSVLITLPK	SSPATSSVLITLPK	2	SSPATSSVLITLPK2	27432.7	26726.5	30882
Q5XI97	Q5XI97	AASD1_RAT	Aarsd1	Alanyl-tRNA editing protein Aarsd1	1	SSPAWGGVVTLHR	SSPAWGGVVTLHR	3	SSPAWGGVVTLHR3	3671.04	4663.02	8806.66
Q6AY84	Q6AY84	SCRN1_RAT	Scrn1	Secernin-1	1	SSPCIHYFTGTPDPSR	SSPC(UniMod:4)IHYFTGTPDPSR	3	SSPC(UniMod:4)IHYFTGTPDPSR3	25701.8	13453	16024
Q5U1V9	Q5U1V9	TSN31_RAT	Tspan31	Tetraspanin-31	1	SSPCQMCGETFLK	SSPC(UniMod:4)QMC(UniMod:4)GETFLK	2	SSPC(UniMod:4)QMC(UniMod:4)GETFLK2	95864.5	97715.9	110308
F7EYC4	F7EYC4	F7EYC4_RAT	Tom1	Target of myb1 membrane trafficking protein	1	SSPDLTGVVAVYEDLR	SSPDLTGVVAVYEDLR	2	SSPDLTGVVAVYEDLR2	11714.3	14844.4	13096.9
F7EYC4	F7EYC4	F7EYC4_RAT	Tom1	Target of myb1 membrane trafficking protein	1	SSPDLTGVVAVYEDLRR	SSPDLTGVVAVYEDLRR	3	SSPDLTGVVAVYEDLRR3	25753.7	25618.2	23810
A0A8I5ZP70	A0A8I5ZP70	A0A8I5ZP70_RAT	Tom1l2	Target of myb1 like 2 membrane trafficking protein	1	SSPDLTGVVHIYEELKR	SSPDLTGVVHIYEELKR	4	SSPDLTGVVHIYEELKR4		5048.1	
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	SSPEIQEPIKPLEK	SSPEIQEPIKPLEK	2	SSPEIQEPIKPLEK2	7409.71	4601.85	
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	SSPEIQEPIKPLEK	SSPEIQEPIKPLEK	3	SSPEIQEPIKPLEK3	53333.2	70968.1	51714.7
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	SSPEISLR	SSPEISLR	2	SSPEISLR2	69110.5	59447.5	48229.9
Q68FQ7	Q68FQ7	RPAP3_RAT	Rpap3	RNA polymerase II-associated protein 3	1	SSPEMLYQYVK	SSPEMLYQYVK	2	SSPEMLYQYVK2	10668.4	12781.3	14923.7
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	SSPEPVALTESETEYVIR	SSPEPVALTESETEYVIR	3	SSPEPVALTESETEYVIR3	35380.4	34142.7	35039.3
P07808	P07808	NPY_RAT	Npy	Pro-neuropeptide Y	1	SSPETLISDLLMR	SSPETLISDLLMR	2	SSPETLISDLLMR2	59638.2	50618	49838.7
P07808	P07808	NPY_RAT	Npy	Pro-neuropeptide Y	1	SSPETLISDLLMR	SSPETLISDLLMR	3	SSPETLISDLLMR3	13677.2	11603.8	15244
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	SSPETPPQEATCVDDIHPR	SSPETPPQEATC(UniMod:4)VDDIHPR	3	SSPETPPQEATC(UniMod:4)VDDIHPR3	92875.6	98589.9	105706
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	SSPEVGSFGFLR	SSPEVGSFGFLR	2	SSPEVGSFGFLR2	15478.2	13670.6	17214
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	SSPFKVSPLSFGR	SSPFKVSPLSFGR	3	SSPFKVSPLSFGR3		6485.4	3940.7
D3Z916	D3Z916	D3Z916_RAT	Mindy3	Ubiquitin carboxyl-terminal hydrolase MINDY	1	SSPGLSDTIFCR	SSPGLSDTIFC(UniMod:4)R	2	SSPGLSDTIFC(UniMod:4)R2	15512.9	18555	14861.9
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	SSPGSLGAIISILDLLSTVPTQVNSEMMR	SSPGSLGAIISILDLLSTVPTQVNSEMMR	4	SSPGSLGAIISILDLLSTVPTQVNSEMMR4		4541.76	4043.72
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	SSPIYVGR	SSPIYVGR	2	SSPIYVGR2	65519.8	58731	58596.3
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	SSPLIQFNLLHSK	SSPLIQFNLLHSK	2	SSPLIQFNLLHSK2		2277.5	5073.2
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	SSPLIQFNLLHSK	SSPLIQFNLLHSK	3	SSPLIQFNLLHSK3	21040.4	15758.6	13564.6
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	SSPLPLQDGPGPEGGR	SSPLPLQDGPGPEGGR	2	SSPLPLQDGPGPEGGR2	81138.5	69716.5	83797.1
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	SSPLTAQLLSLGLK	SSPLTAQLLSLGLK	2	SSPLTAQLLSLGLK2	25819.9	29850.3	21510.2
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	SSPLTAQLLSLGLK	SSPLTAQLLSLGLK	3	SSPLTAQLLSLGLK3	2288.05	4801.43	6692.79
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	SSPLVSAAR	SSPLVSAAR	2	SSPLVSAAR2	19425.4	13272.4	21369.2
A0A0G2K089	A0A0G2K089	A0A0G2K089_RAT	Dennd4c	DENN domain containing 4C	1	SSPNSSLGSVVNSLSGLK	SSPNSSLGSVVNSLSGLK	2	SSPNSSLGSVVNSLSGLK2	8188.73	12631.2	5201.24
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	SSPNVANQPPSPGGK	SSPNVANQPPSPGGK	2	SSPNVANQPPSPGGK2	3218.58	3767.5	6894.49
Q499N6	Q499N6	UBXN1_RAT	Ubxn1	UBX domain-containing protein 1	1	SSPPATDPGPVPSSPR	SSPPATDPGPVPSSPR	2	SSPPATDPGPVPSSPR2	41235.6	21142.1	32784.3
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	SSPPEETSYAFLTPR	SSPPEETSYAFLTPR	2	SSPPEETSYAFLTPR2	400627	400499	381316
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	SSPPEETSYAFLTPR	SSPPEETSYAFLTPR	3	SSPPEETSYAFLTPR3		12366.9	11319.1
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	SSPPVQFSLLHSK	SSPPVQFSLLHSK	2	SSPPVQFSLLHSK2	17080.4	11064.4	
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	SSPPVQFSLLHSK	SSPPVQFSLLHSK	3	SSPPVQFSLLHSK3	21853.3	29958.2	29609.2
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	SSPPWFIVDRPFLFCIR	SSPPWFIVDRPFLFC(UniMod:4)IR	3	SSPPWFIVDRPFLFC(UniMod:4)IR3	33835.5	33876.2	5615.45
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	SSPQEIK	SSPQEIK	2	SSPQEIK2	150014	161606	141518
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	SSPQFGVTLLTYELLQR	SSPQFGVTLLTYELLQR	2	SSPQFGVTLLTYELLQR2	1677.67	21097.9	4469.27
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	SSPQFGVTLLTYELLQR	SSPQFGVTLLTYELLQR	3	SSPQFGVTLLTYELLQR3	14023.9	25052.9	16380.7
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	SSPQFGVTLVTYELLQR	SSPQFGVTLVTYELLQR	2	SSPQFGVTLVTYELLQR2	7041.6	8042.38	7972.41
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	SSPQFGVTLVTYELLQR	SSPQFGVTLVTYELLQR	3	SSPQFGVTLVTYELLQR3	8039.85	16968.3	3153.17
A0A8I5Y9U2	A0A8I5Y9U2	A0A8I5Y9U2_RAT	Cnot2	CCR4-NOT transcription complex, subunit 2	1	SSPSIICMPK	SSPSIIC(UniMod:4)MPK	2	SSPSIIC(UniMod:4)MPK2	26473.6	22479	21656
P23680	P23680	SAMP_RAT	Apcs	Serum amyloid P-component	1	SSPSIVLGQEQDTYGGGFDK	SSPSIVLGQEQDTYGGGFDK	3	SSPSIVLGQEQDTYGGGFDK3	9983.47	3940.59	4930.7
D3ZXD8	D3ZXD8	TM245_RAT	Tmem245	Transmembrane protein 245	1	SSPSSPSPTLGR	SSPSSPSPTLGR	2	SSPSSPSPTLGR2	423988	474712	448312
Q5FVC7	Q5FVC7	ACAP2_RAT	Acap2	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2	1	SSPSTGSLDSGSESK	SSPSTGSLDSGSESK	2	SSPSTGSLDSGSESK2	14540.5	10717.2	12595.7
Q62598	Q62598	DSPP_RAT	Dspp	Dentin sialophosphoprotein	1	SSPTQPILANAQGNSAK	SSPTQPILANAQGNSAK	2	SSPTQPILANAQGNSAK2	1.50372e+06	1.60391e+06	1.3928e+06
Q62598	Q62598	DSPP_RAT	Dspp	Dentin sialophosphoprotein	1	SSPTQPILANAQGNSAK	SSPTQPILANAQGNSAK	3	SSPTQPILANAQGNSAK3	255371	256775	307018
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	SSPTSPTSCTPPPRPPVLEEWTSVAK	SSPTSPTSC(UniMod:4)TPPPRPPVLEEWTSVAK	3	SSPTSPTSC(UniMod:4)TPPPRPPVLEEWTSVAK3	59160.8	45701.8	40779.5
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	SSPTSPTSCTPPPRPPVLEEWTSVAKPK	SSPTSPTSC(UniMod:4)TPPPRPPVLEEWTSVAKPK	4	SSPTSPTSC(UniMod:4)TPPPRPPVLEEWTSVAKPK4	437875	465936	433441
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	SSPVCGSGMTSLLMNSVYPR	SSPVC(UniMod:4)GSGMTSLLMNSVYPR	3	SSPVC(UniMod:4)GSGMTSLLMNSVYPR3		9113.37	14362.7
D3ZLA3	D3ZLA3	D3ZLA3_RAT	Cpne3	Copine 3	1	SSPVEFECINEK	SSPVEFEC(UniMod:4)INEK	2	SSPVEFEC(UniMod:4)INEK2	92519.8	62811.8	80813.2
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	SSPVNNHSSPSQTPALCPAEAR	SSPVNNHSSPSQTPALC(UniMod:4)PAEAR	3	SSPVNNHSSPSQTPALC(UniMod:4)PAEAR3	39305.1	39057.5	51637.9
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	SSPVVIDASTAIDAPSNLR	SSPVVIDASTAIDAPSNLR	2	SSPVVIDASTAIDAPSNLR2	72110.9	79239.1	66549.1
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	SSPVVIDASTAIDAPSNLR	SSPVVIDASTAIDAPSNLR	3	SSPVVIDASTAIDAPSNLR3	31929.4	48758.5	35384
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	SSPVVIDASTAIDAPSNLR	SSPVVIDASTAIDAPSNLR	4	SSPVVIDASTAIDAPSNLR4	131269	149367	126353
Q5XI78	Q5XI78;D3ZQD3	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	0	SSPYPTDVAR	SSPYPTDVAR	2	SSPYPTDVAR2	211331	225698	179946
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	SSQAPMEEK	SSQAPMEEK	2	SSQAPMEEK2	31832.8	34787.6	41058.2
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	SSQDMLSIMEK	SSQDMLSIMEK	2	SSQDMLSIMEK2	61754.8	51836.3	22807.5
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	SSQDMLSIMEK	SSQDMLSIMEK	3	SSQDMLSIMEK3	8107.68	6978.79	6398.19
A0A8I6ARU0	A0A8I6ARU0	A0A8I6ARU0_RAT	Gcnt4	Glucosaminyl (N-acetyl) transferase 4	1	SSQDVSDLQSK	SSQDVSDLQSK	2	SSQDVSDLQSK2	1587.02		
Q794E4	Q794E4;A0A8I5ZW75	HNRPF_RAT	Hnrnpf	Heterogeneous nuclear ribonucleoprotein F	0	SSQEEVR	SSQEEVR	2	SSQEEVR2			30829.1
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	SSQEGEYIK	SSQEGEYIK	2	SSQEGEYIK2	45733.2	46316.5	42669.4
A0A8I5ZK60	A0A8I5ZK60	A0A8I5ZK60_RAT	Ccer2	Coiled-coil glutamate-rich protein 2	1	SSQEIRGEEEEEEEAER	SSQEIRGEEEEEEEAER	3	SSQEIRGEEEEEEEAER3	6918.58	8091.5	5368.92
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	SSQELEGNCR	SSQELEGNC(UniMod:4)R	2	SSQELEGNC(UniMod:4)R2	127297	119050	132735
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	SSQGDALASGPVETGPMK	SSQGDALASGPVETGPMK	2	SSQGDALASGPVETGPMK2	7058.07	8171.61	8486.72
D4A533	D4A533	D4A533_RAT	Tapt1	Transmembrane anterior posterior transformation 1	1	SSQGLSTEENLSASITSQPVHQK	SSQGLSTEENLSASITSQPVHQK	3	SSQGLSTEENLSASITSQPVHQK3	7555.29	10705.9	10521.1
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	SSQHNNPQFVWVVPALR	SSQHNNPQFVWVVPALR	3	SSQHNNPQFVWVVPALR3	41762.9	34246	42277.1
Q6UPR8	Q6UPR8	ERMP1_RAT	Ermp1	Endoplasmic reticulum metallopeptidase 1	1	SSQLDALK	SSQLDALK	2	SSQLDALK2	7140.9	9818.66	8852.15
P14842	P14842	5HT2A_RAT	Htr2a	5-hydroxytryptamine receptor 2A	1	SSQLQVGQK	SSQLQVGQK	2	SSQLQVGQK2	6350.27	5425.66	2553.62
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	SSQLYYFMTLTLADLKPNR	SSQLYYFMTLTLADLKPNR	3	SSQLYYFMTLTLADLKPNR3	6904.45	4312.91	
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	SSQMAQYHFPK	SSQMAQYHFPK	2	SSQMAQYHFPK2	4928.72	6944.77	3162.17
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	SSQMAQYHFPK	SSQMAQYHFPK	3	SSQMAQYHFPK3	39873.4	42844.4	33383.9
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	SSQMPQCPTSCELSR	SSQMPQC(UniMod:4)PTSC(UniMod:4)ELSR	2	SSQMPQC(UniMod:4)PTSC(UniMod:4)ELSR2	14209.6	20704.9	10410.4
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	SSQMPQCPTSCELSR	SSQMPQC(UniMod:4)PTSC(UniMod:4)ELSR	3	SSQMPQC(UniMod:4)PTSC(UniMod:4)ELSR3	4522.93	4803.05	3003.1
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	SSQPLSGFSAR	SSQPLSGFSAR	2	SSQPLSGFSAR2	211529	174874	141194
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	SSQSESEIVPK	SSQSESEIVPK	2	SSQSESEIVPK2	32330.2	37306	29312.9
A0A8I6AJ98	A0A8I6AJ98	A0A8I6AJ98_RAT	ENSRNOG00000066010	Ig-like domain-containing protein	1	SSQSLLDSDGDTYLNWLLQR	SSQSLLDSDGDTYLNWLLQR	3	SSQSLLDSDGDTYLNWLLQR3	18572.6	16085.2	13172.7
M0RDZ5	M0RDZ5	M0RDZ5_RAT	ENSRNOG00000066431	Ig-like domain-containing protein	1	SSQSLLDSDGNTYLYWFLQR	SSQSLLDSDGNTYLYWFLQR	3	SSQSLLDSDGNTYLYWFLQR3	17646	10631.4	
M0RDZ5	M0RDZ5	M0RDZ5_RAT	ENSRNOG00000066431	Ig-like domain-containing protein	1	SSQSLLDSDGNTYLYWFLQRPGQSPQR	SSQSLLDSDGNTYLYWFLQRPGQSPQR	4	SSQSLLDSDGNTYLYWFLQRPGQSPQR4	25281.7		18404.7
A0A8I6GC23	A0A8I6GC23	A0A8I6GC23_RAT	ENSRNOG00000071049	Ig-like domain-containing protein	1	SSQSLLGTSGK	SSQSLLGTSGK	2	SSQSLLGTSGK2	247956	191921	227599
A0A8I5Y9R1	A0A8I5Y9R1	A0A8I5Y9R1_RAT	ENSRNOG00000066814	Ig-like domain-containing protein	1	SSQSLLHSNGNTYLNWLLQR	SSQSLLHSNGNTYLNWLLQR	3	SSQSLLHSNGNTYLNWLLQR3	7052.91	5012.72	17328
F1M5J8	F1M5J8	F1M5J8_RAT	ENSRNOG00000067894	Ig-like domain-containing protein	1	SSQSLLSSGNQK	SSQSLLSSGNQK	2	SSQSLLSSGNQK2	246486	201823	142576
A0A8I6AAM9	A0A8I6AAM9	A0A8I6AAM9_RAT	ENSRNOG00000068499	Ig-like domain-containing protein	1	SSQSLVASDK	SSQSLVASDK	2	SSQSLVASDK2	58033.7	46812.7	51368.2
A0A8I5ZY02	A0A8I5ZY02;A0A0G2JY98	A0A8I5ZY02_RAT	ENSRNOG00000070192	Ig-like domain-containing protein	0	SSQSLVHSDGK	SSQSLVHSDGK	2	SSQSLVHSDGK2	35455.5	29836.6	23736.2
A0A8I5ZY02	A0A8I5ZY02;A0A0G2JY98	A0A8I5ZY02_RAT	ENSRNOG00000070192	Ig-like domain-containing protein	0	SSQSLVHSDGK	SSQSLVHSDGK	3	SSQSLVHSDGK3	11713.9		11626.8
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	SSQSLVTHDLK	SSQSLVTHDLK	3	SSQSLVTHDLK3	4480.14	7452.42	
A0A0G2K9Z5	A0A0G2K9Z5;F1LYF1	A0A0G2K9Z5_RAT	AABR07060971.1	Ig-like domain-containing protein	0	SSQSLVYSDGK	SSQSLVYSDGK	2	SSQSLVYSDGK2	153162	109446	170232
E9PT29	E9PT29	E9PT29_RAT	Ddx17	DEAD box helicase 17	1	SSQSSSQQFSGIGR	SSQSSSQQFSGIGR	2	SSQSSSQQFSGIGR2	1426.94		
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	SSQYLMEVAHDLR	SSQYLMEVAHDLR	2	SSQYLMEVAHDLR2	3299.98	1855.98	3449.28
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	SSQYLMEVAHDLR	SSQYLMEVAHDLR	3	SSQYLMEVAHDLR3	24417	23100.1	23923.9
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	SSRPDTLLSSEQPLRPGK	SSRPDTLLSSEQPLRPGK	4	SSRPDTLLSSEQPLRPGK4	11017.8	13415.4	20847.9
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	SSRPEFYK	SSRPEFYK	2	SSRPEFYK2	102590	109931	103934
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	SSRPEVTPISLR	SSRPEVTPISLR	3	SSRPEVTPISLR3	110795	84788.8	122649
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	SSRPLHSLSVLAFDQER	SSRPLHSLSVLAFDQER	3	SSRPLHSLSVLAFDQER3	15007.2	17202.5	9821.41
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	SSRPLHSLSVLAFDQER	SSRPLHSLSVLAFDQER	4	SSRPLHSLSVLAFDQER4	16556.2	21294.9	19961.9
F1LP44	F1LP44	F1LP44_RAT	Itgal	Integrin subunit alpha L	1	SSRPLLAAGAPR	SSRPLLAAGAPR	3	SSRPLLAAGAPR3	4954.72	3503.66	6530.36
A0A0G2JT44	A0A0G2JT44	A0A0G2JT44_RAT	Tmc6	Transmembrane channel-like protein	1	SSRPLLGNVVR	SSRPLLGNVVR	3	SSRPLLGNVVR3	66033.7	71538.6	52889.5
A0A0G2JV12	A0A0G2JV12	A0A0G2JV12_RAT	Col15a1	Collagen type XV alpha 1 chain	1	SSRPLTFEPSAGIFVGNAGATGLER	SSRPLTFEPSAGIFVGNAGATGLER	3	SSRPLTFEPSAGIFVGNAGATGLER3	4612.85		4674.58
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	SSRPPEIR	SSRPPEIR	2	SSRPPEIR2	12969.7	10448.4	10705.9
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	SSRPPEIREEEVQTVEDGVFDIHL	SSRPPEIREEEVQTVEDGVFDIHL	3	SSRPPEIREEEVQTVEDGVFDIHL3	23617	32482	44203.9
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	SSRPPEIREEEVQTVEDGVFDIHL	SSRPPEIREEEVQTVEDGVFDIHL	4	SSRPPEIREEEVQTVEDGVFDIHL4	114712	109644	99140.1
D3Z8E6	D3Z8E6	CAMP1_RAT	Camsap1	Calmodulin-regulated spectrin-associated protein 1	1	SSRPPVPISNATK	SSRPPVPISNATK	3	SSRPPVPISNATK3	3523.57	2299.63	5685.69
Q4KLH5	A0A8I6AVV4;Q4KLH5	AGFG1_RAT	Agfg1	Arf-GAP domain and FG repeat-containing protein 1	0	SSSADFGSFSTSQSHQTASTVSK	SSSADFGSFSTSQSHQTASTVSK	3	SSSADFGSFSTSQSHQTASTVSK3	9315.41	4148.82	7856.79
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	SSSAQCLSSSGK	SSSAQC(UniMod:4)LSSSGK	2	SSSAQC(UniMod:4)LSSSGK2	3317.97		5676.33
F7EUW3	F7EUW3	F7EUW3_RAT	C2cd2l	C2CD2-like	1	SSSCGDAELLGQATLPVGSPSKPLSR	SSSC(UniMod:4)GDAELLGQATLPVGSPSKPLSR	3	SSSC(UniMod:4)GDAELLGQATLPVGSPSKPLSR3	22523.8	32637.4	33491.4
Q63175	Q63175	SERC5_RAT	Serinc5	Serine incorporator 5	1	SSSDALQR	SSSDALQR	2	SSSDALQR2	51218.6	53054.2	62233
Q505J9	Q505J9	ATAD1_RAT	Atad1	Outer mitochondrial transmembrane helix translocase	1	SSSDHEATAMMK	SSSDHEATAMMK	3	SSSDHEATAMMK3	32083.1	37321.5	30188.4
A0A8I6A6G8	A0A8I6A6G8	A0A8I6A6G8_RAT	Hm13	Histocompatibility minor 13	1	SSSDMPETITSR	SSSDMPETITSR	2	SSSDMPETITSR2	38370.5	34581.2	44166.3
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	SSSDNNTNTLGR	SSSDNNTNTLGR	2	SSSDNNTNTLGR2	8653.19	1310.42	
F7FJT3	F7FJT3	F7FJT3_RAT	Rad23a	UV excision repair protein RAD23	1	SSSEESATTTSPESISGSVPSSGSSGR	SSSEESATTTSPESISGSVPSSGSSGR	3	SSSEESATTTSPESISGSVPSSGSSGR3	12015.7	10409.2	12707.9
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	SSSEEVLR	SSSEEVLR	2	SSSEEVLR2	196454	215471	232986
Q63060	Q63060;D3Z8F7	GLPK_RAT	Gk	Glycerol kinase	0	SSSEIYGLMK	SSSEIYGLMK	2	SSSEIYGLMK2	31964.9	39598.4	31794.6
Q6AYE2	Q6AYE2	SHLB1_RAT	Sh3glb1	Endophilin-B1	1	SSSEQELR	SSSEQELR	2	SSSEQELR2	49553.4	40525	57903.2
Q99M64	Q99M64	P4K2A_RAT	Pi4k2a	Phosphatidylinositol 4-kinase type 2-alpha	1	SSSESYTQSFQSR	SSSESYTQSFQSR	2	SSSESYTQSFQSR2			3117.23
Q3MHS7	Q3MHS7	Q3MHS7_RAT	Gmds	GDP-mannose 4,6-dehydratase	1	SSSFNTGR	SSSFNTGR	2	SSSFNTGR2		13449.3	
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	SSSGFQSSTLLTSVR	SSSGFQSSTLLTSVR	2	SSSGFQSSTLLTSVR2	2427.19	3194.14	
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	SSSGTPTSIKPVDNLVSGFSLK	SSSGTPTSIKPVDNLVSGFSLK	3	SSSGTPTSIKPVDNLVSGFSLK3	112822	119822	109767
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	SSSHIVLVISNK	SSSHIVLVISNK	3	SSSHIVLVISNK3	3172.71	3143.18	2415.98
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	SSSITSFK	SSSITSFK	2	SSSITSFK2	18861.5	14329.9	
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	SSSITSFKDPK	SSSITSFKDPK	2	SSSITSFKDPK2	22561.7	17430.3	
D3ZY47	D3ZY47	D3ZY47_RAT	C19h1orf198	Similar to RIKEN cDNA 2310022B05	1	SSSLDALGPAR	SSSLDALGPAR	2	SSSLDALGPAR2	15333.7	8646.77	9681.13
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	SSSLDMTPYSTPQMSPATTPANK	SSSLDMTPYSTPQMSPATTPANK	3	SSSLDMTPYSTPQMSPATTPANK3	14367.4	16639.2	14053.3
D3ZAL7	D3ZAL7	D3ZAL7_RAT	Gab1	GRB2-associated binding protein 1	1	SSSLEGFHNQLK	SSSLEGFHNQLK	3	SSSLEGFHNQLK3	4820.96	1490.25	
A0A8I6APP3	A0A8I6APP3	A0A8I6APP3_RAT	Plekho2	Pleckstrin homology domain containing O2	1	SSSLGDLLR	SSSLGDLLR	2	SSSLGDLLR2	190401	163180	182841
P51111	P51111	HD_RAT	Htt	Huntingtin	1	SSSLGSFYHLPSYLR	SSSLGSFYHLPSYLR	2	SSSLGSFYHLPSYLR2	5336.3	8601.8	16411.1
P51111	P51111	HD_RAT	Htt	Huntingtin	1	SSSLGSFYHLPSYLR	SSSLGSFYHLPSYLR	3	SSSLGSFYHLPSYLR3	83539.3	103149	76131.6
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	SSSLHYAACFGR	SSSLHYAAC(UniMod:4)FGR	3	SSSLHYAAC(UniMod:4)FGR3	3875.74	4618.64	5314.51
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	SSSLHYAACFGRPQVAK	SSSLHYAAC(UniMod:4)FGRPQVAK	3	SSSLHYAAC(UniMod:4)FGRPQVAK3	2510.39	4183.06	3626.03
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	SSSLHYAACFGRPQVAK	SSSLHYAAC(UniMod:4)FGRPQVAK	4	SSSLHYAAC(UniMod:4)FGRPQVAK4	6230.62		
D3ZS41	D3ZS41	D3ZS41_RAT	Ecm2	Extracellular matrix protein 2	1	SSSLYPR	SSSLYPR	2	SSSLYPR2	25235.7	24352.4	25415.9
P97578	P97578	FEZ2_RAT	Fez2	Fasciculation and elongation protein zeta-2	1	SSSMSSCEER	SSSMSSC(UniMod:4)EER	2	SSSMSSC(UniMod:4)EER2			5970.55
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	SSSMSVTGR	SSSMSVTGR	2	SSSMSVTGR2	10309.1	9518.21	17446.2
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	SSSNAWTLK	SSSNAWTLK	2	SSSNAWTLK2	9808.54	5056.85	7925.24
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	SSSNESFSSNQSADSAPDEETLALR	SSSNESFSSNQSADSAPDEETLALR	3	SSSNESFSSNQSADSAPDEETLALR3	5138.27	5154.52	4790
D4A7F0	D4A7F0	D4A7F0_RAT	Ubr3	E3 ubiquitin-protein ligase	1	SSSNIPCVPK	SSSNIPC(UniMod:4)VPK	2	SSSNIPC(UniMod:4)VPK2	9189.89		10993.5
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	SSSNVNGGPELDR	SSSNVNGGPELDR	2	SSSNVNGGPELDR2	9888.77	4868.24	9156.06
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	SSSPDLSSSSK	SSSPDLSSSSK	2	SSSPDLSSSSK2		40371.1	
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	SSSPEPVTHLK	SSSPEPVTHLK	2	SSSPEPVTHLK2	67485.3	69498.5	51278.2
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	SSSPEPVTHLK	SSSPEPVTHLK	3	SSSPEPVTHLK3	279635	245943	254054
A0A8I6AJP4	A0A8I6AJP4	A0A8I6AJP4_RAT	Phactr4	Phosphatase and actin regulator 4	1	SSSPILSEEEAEGSLR	SSSPILSEEEAEGSLR	2	SSSPILSEEEAEGSLR2	2265.08		2393.48
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	SSSQCVPEGETVIWNNK	SSSQC(UniMod:4)VPEGETVIWNNK	2	SSSQC(UniMod:4)VPEGETVIWNNK2	8929.95	2232.25	10693.8
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	SSSQSGSSPSSPESVLR	SSSQSGSSPSSPESVLR	2	SSSQSGSSPSSPESVLR2	1984.02		3961.46
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	SSSQSGSSPSSPESVLRPR	SSSQSGSSPSSPESVLRPR	3	SSSQSGSSPSSPESVLRPR3	69725.6	51771.4	66786.7
A0A8I6G6W8	A0A8I5Y276;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	SSSQTPAQPPVTK	SSSQTPAQPPVTK	2	SSSQTPAQPPVTK2	31110.4	22100.4	22487.7
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	SSSQTQILPTQYQR	SSSQTQILPTQYQR	2	SSSQTQILPTQYQR2	25777.7	16503.5	7731.89
Q9Z1W6	Q9Z1W6	LYRIC_RAT	Mtdh	Protein LYRIC	1	SSSQVPPMLQDTDKPK	SSSQVPPMLQDTDKPK	3	SSSQVPPMLQDTDKPK3	42297.4	40696.5	43871.1
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	SSSRDDNLPLTEAVRPK	SSSRDDNLPLTEAVRPK	4	SSSRDDNLPLTEAVRPK4	18707.3	26582.7	14208.4
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	SSSSASQSNHSCTSMPSSPATPASGTK	SSSSASQSNHSC(UniMod:4)TSMPSSPATPASGTK	3	SSSSASQSNHSC(UniMod:4)TSMPSSPATPASGTK3	16949.9	16763.9	14580.8
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	SSSSCVPR	SSSSC(UniMod:4)VPR	2	SSSSC(UniMod:4)VPR2	111442		63449.9
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	SSSSFTPFIDPR	SSSSFTPFIDPR	2	SSSSFTPFIDPR2	14074.3	17156.2	15965.5
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	SSSSLLASPSHIAAK	SSSSLLASPSHIAAK	2	SSSSLLASPSHIAAK2	3366.1	4154.3	7024.38
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	SSSSLLASPSHIAAK	SSSSLLASPSHIAAK	3	SSSSLLASPSHIAAK3	36003.9	22427.8	27402.3
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	SSSSNVHNILPECANK	SSSSNVHNILPEC(UniMod:4)ANK	2	SSSSNVHNILPEC(UniMod:4)ANK2	6849.69	6230.31	5428.51
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	SSSSNVHNILPECANK	SSSSNVHNILPEC(UniMod:4)ANK	3	SSSSNVHNILPEC(UniMod:4)ANK3	62050.1	79016.7	88546.9
O35462	O35462	ANGP2_RAT	Angpt2	Angiopoietin-2	1	SSSSPYMSNAVQR	SSSSPYMSNAVQR	2	SSSSPYMSNAVQR2	5585.72		8506.11
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	SSSSSGVPYSPAIPNK	SSSSSGVPYSPAIPNK	2	SSSSSGVPYSPAIPNK2	33766.8	28925	23763.6
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	SSSSSPTSPGSFR	SSSSSPTSPGSFR	2	SSSSSPTSPGSFR2	15779.6	12705.5	5239.88
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	SSSSSSSGVGSPAVTPTEK	SSSSSSSGVGSPAVTPTEK	2	SSSSSSSGVGSPAVTPTEK2	13451.3	15814.8	19411
D3ZMA2	D3ZMA2	D3ZMA2_RAT	Mtmr14	Myotubularin related protein 14	1	SSSSSSSNHSDNFFR	SSSSSSSNHSDNFFR	3	SSSSSSSNHSDNFFR3	22318.7	27695.7	25046.8
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	SSSSSTEMMTTFKPALSAR	SSSSSTEMMTTFKPALSAR	3	SSSSSTEMMTTFKPALSAR3	18391	30123.6	21999.1
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	SSSSTETMHFASSFSSR	SSSSTETMHFASSFSSR	3	SSSSTETMHFASSFSSR3	3959.2	2608.31	12934
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	SSSSTMLDGAGALGK	SSSSTMLDGAGALGK	2	SSSSTMLDGAGALGK2	20117.4	16375.6	26229.3
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	SSSSVTTSEAHPSVPSSSDDSDLER	SSSSVTTSEAHPSVPSSSDDSDLER	3	SSSSVTTSEAHPSVPSSSDDSDLER3	682411	583849	628432
A0A8I5Y817	A0A8I5Y817	A0A8I5Y817_RAT	ENSRNOG00000069868	Ig-like domain-containing protein	1	SSSTAFMQLSSLTPDDSAVYYCAR	SSSTAFMQLSSLTPDDSAVYYC(UniMod:4)AR	3	SSSTAFMQLSSLTPDDSAVYYC(UniMod:4)AR3	41663.4	43010.4	50020.3
A0A8I6ADW6	A0A8I6ADW6	A0A8I6ADW6_RAT	ENSRNOG00000064626	Ig-like domain-containing protein	1	SSSTAFMQLSSLTPEDSAVYYCAR	SSSTAFMQLSSLTPEDSAVYYC(UniMod:4)AR	3	SSSTAFMQLSSLTPEDSAVYYC(UniMod:4)AR3	19065.5	26187.2	20085.5
A0A8I6AHX6	A0A8I6AHX6	A0A8I6AHX6_RAT	ENSRNOG00000063523	Ig-like domain-containing protein	1	SSSTAYMDLSSLTSEDSAVYFCAR	SSSTAYMDLSSLTSEDSAVYFC(UniMod:4)AR	3	SSSTAYMDLSSLTSEDSAVYFC(UniMod:4)AR3	10468.6	2800.15	
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	SSSTCLFVAVK	SSSTC(UniMod:4)LFVAVK	2	SSSTC(UniMod:4)LFVAVK2	23389.6	23252.5	13051.6
A0A8I6A896	A0A8I6A896	A0A8I6A896_RAT	Ap4b1	AP complex subunit beta	1	SSSTGVVMGATK	SSSTGVVMGATK	2	SSSTGVVMGATK2			5278.95
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	SSSTSDILEPFTVER	SSSTSDILEPFTVER	2	SSSTSDILEPFTVER2	3549.72	1283.85	1832.49
P86411	P86411	RGPA2_RAT	Ralgapa2	Ral GTPase-activating protein subunit alpha-2	1	SSSTSDITER	SSSTSDITER	2	SSSTSDITER2		2541.4	1048.11
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	SSSVLGGR	SSSVLGGR	2	SSSVLGGR2	536332	666075	688858
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	SSSVTLADHLQLK	SSSVTLADHLQLK	2	SSSVTLADHLQLK2	5392.51	4657.57	2870.37
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	SSSVTLADHLQLK	SSSVTLADHLQLK	3	SSSVTLADHLQLK3	42542.2	43223.1	44738.7
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	SSSVTSIDK	SSSVTSIDK	2	SSSVTSIDK2	16352.8	12703.6	16728.6
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	SSSVTSIDKESR	SSSVTSIDKESR	3	SSSVTSIDKESR3	37983.8	61345.2	66663.5
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	SSSVVAGEMSGCGGK	SSSVVAGEMSGC(UniMod:4)GGK	2	SSSVVAGEMSGC(UniMod:4)GGK2	11877	4402.42	7385.85
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	SSSYCEYLRPSIDCFK	SSSYC(UniMod:4)EYLRPSIDC(UniMod:4)FK	3	SSSYC(UniMod:4)EYLRPSIDC(UniMod:4)FK3	7107.8	11804.5	11886.7
F1M0H0	F1M0H0	F1M0H0_RAT	Zfp318	Zinc finger protein 318	1	SSSYSVR	SSSYSVR	2	SSSYSVR2		12463.6	7765.86
P52873	P52873	PYC_RAT	Pc	Pyruvate carboxylase, mitochondrial	1	SSTAPVASPNVR	SSTAPVASPNVR	2	SSTAPVASPNVR2	9593.41	11617.1	
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	SSTEEEMEVEK	SSTEEEMEVEK	2	SSTEEEMEVEK2	25954.4	19257.4	26465.9
P37727	P37727	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	1	SSTEEPSENVPK	SSTEEPSENVPK	2	SSTEEPSENVPK2	28623.9	31136.8	41532.4
O54923	O54923	EXOC6_RAT	Exoc6	Exocyst complex component 6	1	SSTEIDDMLR	SSTEIDDMLR	2	SSTEIDDMLR2	5498.06	4908.1	8208.01
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	SSTFNSQEPHNILPLASSQIR	SSTFNSQEPHNILPLASSQIR	3	SSTFNSQEPHNILPLASSQIR3	24142.7	34130	33879.2
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	SSTFQLFGSPHGK	SSTFQLFGSPHGK	2	SSTFQLFGSPHGK2	44009.8	41173.4	54284.5
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	SSTFQLFGSPHGK	SSTFQLFGSPHGK	3	SSTFQLFGSPHGK3	167538	170694	140801
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	SSTGGTIQIENGYFVHHFAPEDLPTMAK	SSTGGTIQIENGYFVHHFAPEDLPTMAK	4	SSTGGTIQIENGYFVHHFAPEDLPTMAK4	405239	404809	415896
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	SSTGILSLTFHTDMAVAK	SSTGILSLTFHTDMAVAK	3	SSTGILSLTFHTDMAVAK3	27277.9	26859.7	22307.3
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	SSTGPGEQLR	SSTGPGEQLR	2	SSTGPGEQLR2	1.23905e+06	1.52117e+06	1.2859e+06
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	SSTGRPDWTCIVVGFTSGYVR	SSTGRPDWTC(UniMod:4)IVVGFTSGYVR	3	SSTGRPDWTC(UniMod:4)IVVGFTSGYVR3	8724.81	8250.97	9041.31
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	SSTGSPTSPINAEK	SSTGSPTSPINAEK	2	SSTGSPTSPINAEK2	413130	431671	408047
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	SSTIATK	SSTIATK	1	SSTIATK1			8962.05
Q5FWU0	Q5FWU0	Q5FWU0_RAT	Wasf2	Wiskott-Aldrich syndrome protein family member	1	SSTIQDQK	SSTIQDQK	1	SSTIQDQK1			29300.4
Q5FWU0	Q5FWU0	Q5FWU0_RAT	Wasf2	Wiskott-Aldrich syndrome protein family member	1	SSTIQDQK	SSTIQDQK	2	SSTIQDQK2			9225.15
D4A2N2	D4A2N2	D4A2N2_RAT	Inpp5b	phosphoinositide 5-phosphatase	1	SSTITVSDK	SSTITVSDK	2	SSTITVSDK2	15538.7	26288.6	20225.9
Q68FT7	Q68FT7	Q68FT7_RAT	Farsb	Phenylalanine--tRNA ligase beta subunit	1	SSTLPELPYR	SSTLPELPYR	2	SSTLPELPYR2	13598.9		17669.9
Q68FT7	Q68FT7	Q68FT7_RAT	Farsb	Phenylalanine--tRNA ligase beta subunit	1	SSTLPELPYRK	SSTLPELPYRK	3	SSTLPELPYRK3	9623.43	20545.1	17746.9
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	SSTLSQLPGDK	SSTLSQLPGDK	2	SSTLSQLPGDK2	39533.6	37449.6	41562.8
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	SSTMQYVILMYMK	SSTMQYVILMYMK	2	SSTMQYVILMYMK2	7648.95	4644.77	3226.09
P70550	P70550	RAB8B_RAT	Rab8b	Ras-related protein Rab-8B	1	SSTNVEEAFFTLAR	SSTNVEEAFFTLAR	2	SSTNVEEAFFTLAR2	41782.2	91754	67154.6
P70550	P70550	RAB8B_RAT	Rab8b	Ras-related protein Rab-8B	1	SSTNVEEAFFTLAR	SSTNVEEAFFTLAR	3	SSTNVEEAFFTLAR3	52388.6	33683.7	27664.5
M0RB87	M0RB87	M0RB87_RAT	Gdf2	Growth differentiation factor 2	1	SSTPASNIVR	SSTPASNIVR	2	SSTPASNIVR2	11194.9	11708.6	18430.9
P45592	P45592	COF1_RAT	Cfl1	Cofilin-1	1	SSTPEEVK	SSTPEEVK	2	SSTPEEVK2	531975	440839	544583
P45592	P45592	COF1_RAT	Cfl1	Cofilin-1	1	SSTPEEVKK	SSTPEEVKK	2	SSTPEEVKK2			117675
Q5U2N0	Q5U2N0	PYRG2_RAT	Ctps2	CTP synthase 2	1	SSTPIEMAVK	SSTPIEMAVK	2	SSTPIEMAVK2	23469.9	11915.9	14946.5
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	SSTPNGYDNGIIWATWK	SSTPNGYDNGIIWATWK	2	SSTPNGYDNGIIWATWK2	1.76236e+06	2.34188e+06	3.50906e+06
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	SSTPNGYDNGIIWATWK	SSTPNGYDNGIIWATWK	3	SSTPNGYDNGIIWATWK3	610663	566073	1.20144e+06
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	SSTPNGYDNGIIWATWKTR	SSTPNGYDNGIIWATWKTR	3	SSTPNGYDNGIIWATWKTR3	7429.78	11148.5	7067.2
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	SSTSFSGPGGPSKPK	SSTSFSGPGGPSKPK	3	SSTSFSGPGGPSKPK3	34004.2	27955.5	33379
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	SSTSGFAIKPAIAGGK	SSTSGFAIKPAIAGGK	3	SSTSGFAIKPAIAGGK3	31752.4	33452.6	44001
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	SSTSLAFESR	SSTSLAFESR	2	SSTSLAFESR2	76697.2	51030.3	70156.6
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	SSTSPVVPTEGLVNGVGAPASVSGVR	SSTSPVVPTEGLVNGVGAPASVSGVR	3	SSTSPVVPTEGLVNGVGAPASVSGVR3	41999.2	46322.3	51878.8
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	SSTSQKPESKPETVSSNAEEIPSSVVASR	SSTSQKPESKPETVSSNAEEIPSSVVASR	4	SSTSQKPESKPETVSSNAEEIPSSVVASR4	135763	151177	127444
A0A8I5YCC9	A0A8I5YCC9	A0A8I5YCC9_RAT	Itga5	Integrin subunit alpha 5	1	SSTTSGTQVLK	SSTTSGTQVLK	2	SSTTSGTQVLK2	18192.1	15461.7	14605.3
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	SSTTSMTSVPKPLK	SSTTSMTSVPKPLK	2	SSTTSMTSVPKPLK2	11012.2	9105.46	10809.5
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	SSTTSMTSVPKPLK	SSTTSMTSVPKPLK	3	SSTTSMTSVPKPLK3	129797	144926	133965
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	SSTVAPTLPGEVR	SSTVAPTLPGEVR	2	SSTVAPTLPGEVR2	4.65656e+06	3.14411e+06	2.97239e+06
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	SSTVAPTLPGEVR	SSTVAPTLPGEVR	3	SSTVAPTLPGEVR3	29417	17119.3	20295.3
B5DFL3	B5DFL3	B5DFL3_RAT	Itgb1bp1	Integrin subunit beta 1 binding protein 1	1	SSTVASLDTDSTK	SSTVASLDTDSTK	2	SSTVASLDTDSTK2	7183.54	6218.65	4855.14
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	SSTVGEIVNLMSVDAQR	SSTVGEIVNLMSVDAQR	2	SSTVGEIVNLMSVDAQR2	6068.42	6952.08	3203.28
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	SSTVGEIVNLMSVDAQR	SSTVGEIVNLMSVDAQR	3	SSTVGEIVNLMSVDAQR3	6186.6	6006.41	5746.84
D3ZF97	D3ZF97	D3ZF97_RAT	Erlec1	Endoplasmic reticulum lectin	1	SSTVMYICHPESK	SSTVMYIC(UniMod:4)HPESK	2	SSTVMYIC(UniMod:4)HPESK2	3289.43	2370.28	2166.44
D3ZF97	D3ZF97	D3ZF97_RAT	Erlec1	Endoplasmic reticulum lectin	1	SSTVMYICHPESK	SSTVMYIC(UniMod:4)HPESK	3	SSTVMYIC(UniMod:4)HPESK3	12278.9	12316	12304.5
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	SSTVTEAPIAVVTSR	SSTVTEAPIAVVTSR	2	SSTVTEAPIAVVTSR2	47797.3	52959.8	51118.8
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	SSTVTEAPIAVVTSR	SSTVTEAPIAVVTSR	3	SSTVTEAPIAVVTSR3	10080.3	6924.7	10520.3
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	SSTWSMTAHGATFELVPTSPPK	SSTWSMTAHGATFELVPTSPPK	3	SSTWSMTAHGATFELVPTSPPK3	38802.5	29983.3	23387.3
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	SSTWSMTAHGATFELVPTSPPKDVTVVSK	SSTWSMTAHGATFELVPTSPPKDVTVVSK	4	SSTWSMTAHGATFELVPTSPPKDVTVVSK4	7041.53	12593.2	12379.3
A0A8I6AA08	A0A8I6AA08	A0A8I6AA08_RAT	Septin6	Septin	1	SSTYDLQESNVGLK	SSTYDLQESNVGLK	2	SSTYDLQESNVGLK2	12020.3	12324.4	18713.8
F1M0B5	F1M0B5	F1M0B5_RAT	Cd84	CD84 molecule	1	SSVAFVTPK	SSVAFVTPK	1	SSVAFVTPK1	5497.47	4589.69	2987.27
F1M0B5	F1M0B5	F1M0B5_RAT	Cd84	CD84 molecule	1	SSVAFVTPK	SSVAFVTPK	2	SSVAFVTPK2	267552	254013	266755
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	SSVALSVDK	SSVALSVDK	2	SSVALSVDK2	38026.1	27865.6	28510.5
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	SSVASLVGR	SSVASLVGR	2	SSVASLVGR2	68174	61408.7	59967.1
P01026	P01026	CO3_RAT	C3	Complement C3	1	SSVAVPYVIVPLK	SSVAVPYVIVPLK	2	SSVAVPYVIVPLK2	3.7884e+06	3.66279e+06	3.4133e+06
P01026	P01026	CO3_RAT	C3	Complement C3	1	SSVAVPYVIVPLK	SSVAVPYVIVPLK	3	SSVAVPYVIVPLK3	60732.4	59269.2	56601.8
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	SSVCSSLNSVNSSDSR	SSVC(UniMod:4)SSLNSVNSSDSR	2	SSVC(UniMod:4)SSLNSVNSSDSR2	7917.41	11782	9383.64
E9PSP1	E9PSP1	E9PSP1_RAT	Pltp	Phospholipid transfer protein	1	SSVDELVGIDYSLLK	SSVDELVGIDYSLLK	2	SSVDELVGIDYSLLK2	41354.9	22231.2	29136.3
E9PSP1	E9PSP1	E9PSP1_RAT	Pltp	Phospholipid transfer protein	1	SSVDELVGIDYSLLK	SSVDELVGIDYSLLK	3	SSVDELVGIDYSLLK3	5192.11	3905.62	
Q71RP1	Q71RP1	HPSE_RAT	Hpse	Heparanase	1	SSVDMLYSFAK	SSVDMLYSFAK	2	SSVDMLYSFAK2	118550	109113	123172
A0A096MK89	A0A096MK89	A0A096MK89_RAT	Adgrv1	Adhesion G protein-coupled receptor V1	1	SSVEIIVK	SSVEIIVK	2	SSVEIIVK2	2527.43		4529.68
D3ZJR6	D3ZJR6	D3ZJR6_RAT	Smcr8	SMCR8-C9orf72 complex subunit	1	SSVESVLIK	SSVESVLIK	2	SSVESVLIK2	2510.21	3674.24	2398.34
B2RYG8	B2RYG8	ELP6_RAT	Elp6	Elongator complex protein 6	1	SSVEVLFHSQEEPHPLQFLR	SSVEVLFHSQEEPHPLQFLR	3	SSVEVLFHSQEEPHPLQFLR3	3011.25	2620.29	1687.77
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	SSVEVYAWAPKPYHK	SSVEVYAWAPKPYHK	4	SSVEVYAWAPKPYHK4	1421.49		2331.32
Q68HB8	Q68HB8	Q68HB8_RAT	Pcdh7	Protocadherin 7	1	SSVFELQVADTPDGEKQPQLIVK	SSVFELQVADTPDGEKQPQLIVK	3	SSVFELQVADTPDGEKQPQLIVK3	3147.38	6391.94	6348.95
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	SSVFLATALNHVEQDQK	SSVFLATALNHVEQDQK	3	SSVFLATALNHVEQDQK3	13220.5	5159.64	13413.8
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	SSVGAPVEVTHNFQVDFVWK	SSVGAPVEVTHNFQVDFVWK	3	SSVGAPVEVTHNFQVDFVWK3	15180.6	8100.83	11317.5
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	SSVGINRPTMSASEVNIPK	SSVGINRPTMSASEVNIPK	3	SSVGINRPTMSASEVNIPK3	42351.3	63636.4	36444.6
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	SSVGTGLLLK	SSVGTGLLLK	2	SSVGTGLLLK2	106872	96595.2	86379.1
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	SSVGWDATEDPPLSR	SSVGWDATEDPPLSR	2	SSVGWDATEDPPLSR2	35773.4	35835.4	39232.9
Q63737	Q63737	PHLP_RAT	Pdcl	Phosducin-like protein	1	SSVIGASSR	SSVIGASSR	2	SSVIGASSR2	54170.4	63147.3	64658
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	SSVLAPAPQDPK	SSVLAPAPQDPK	2	SSVLAPAPQDPK2	41336.7	37392	31584.2
P39052	P39052;P21575;Q08877	DYN2_RAT	Dnm2	Dynamin-2	0	SSVLENFVGR	SSVLENFVGR	2	SSVLENFVGR2	136257	130166	152557
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	SSVLESLVGR	SSVLESLVGR	2	SSVLESLVGR2	160571	132757	140717
Q498R3	Q498R3	DJC10_RAT	Dnajc10	DnaJ homolog subfamily C member 10	1	SSVLFLNSLDAK	SSVLFLNSLDAK	2	SSVLFLNSLDAK2	10117.7	12713.9	7369.6
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	SSVLHEGEGNIR	SSVLHEGEGNIR	3	SSVLHEGEGNIR3	21457.1	19337.9	23358.3
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	SSVLLVPLGDDFR	SSVLLVPLGDDFR	2	SSVLLVPLGDDFR2	32563.5	20865.3	11209.7
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SSVLNCVR	SSVLNC(UniMod:4)VR	2	SSVLNC(UniMod:4)VR2	3.66134e+06	3.94853e+06	4.10894e+06
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	SSVLPLYENTFQELQVVR	SSVLPLYENTFQELQVVR	3	SSVLPLYENTFQELQVVR3	6958.73		6234.46
D4ACK1	D4ACK1	D4ACK1_RAT	Nup214	Nucleoporin 214	1	SSVLTVSNK	SSVLTVSNK	2	SSVLTVSNK2	3721.68	3696.95	4039.81
A0A0G2K2B7	A0A0G2K2B7	A0A0G2K2B7_RAT	Wdr20	WD repeat domain 20	1	SSVMDGAIASGVSK	SSVMDGAIASGVSK	2	SSVMDGAIASGVSK2	6296.2	7218.92	6144.33
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	SSVNGEAGPVPPPR	SSVNGEAGPVPPPR	2	SSVNGEAGPVPPPR2	18807.5	12683.3	19379.1
P35286	P35286	RAB13_RAT	Rab13	Ras-related protein Rab-13	1	SSVNVDEAFSSLAR	SSVNVDEAFSSLAR	2	SSVNVDEAFSSLAR2	29527.7	44552	52467.4
A0A0G2K0G9	A0A0G2K0G9	A0A0G2K0G9_RAT	Rin3	Ras and Rab interactor 3	1	SSVQDFICVSYLQPEQQSR	SSVQDFIC(UniMod:4)VSYLQPEQQSR	3	SSVQDFIC(UniMod:4)VSYLQPEQQSR3	6536.94	9975.15	
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	SSVSEGILAVEER	SSVSEGILAVEER	2	SSVSEGILAVEER2	7845.27	8922.49	9762.86
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	SSVSGVVATVFGATGFLGR	SSVSGVVATVFGATGFLGR	2	SSVSGVVATVFGATGFLGR2	4491.38	3830.75	6667.27
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	SSVSGVVATVFGATGFLGR	SSVSGVVATVFGATGFLGR	3	SSVSGVVATVFGATGFLGR3	4782.36	6625.43	5499.88
Q5U2R3	Q5U2R3	FRMD8_RAT	Frmd8	FERM domain-containing protein 8	1	SSVSSVGAR	SSVSSVGAR	2	SSVSSVGAR2	10564.4	12657.8	
Q9QZN9	Q9QZN9	CNR2_RAT	Cnr2	Cannabinoid receptor 2	1	SSVTETEAEVK	SSVTETEAEVK	2	SSVTETEAEVK2	75030.4	92927	72856
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	SSVTFECDLGR	SSVTFEC(UniMod:4)DLGR	2	SSVTFEC(UniMod:4)DLGR2	387692	382895	416281
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	SSVTSTGNQLLR	SSVTSTGNQLLR	2	SSVTSTGNQLLR2	4995	2175.64	4069.65
Q6AYK3	Q6AYK3	INO1_RAT	Isyna1	Inositol-3-phosphate synthase 1	1	SSVVDDMVQSNR	SSVVDDMVQSNR	2	SSVVDDMVQSNR2	8343.16	6145.01	12361
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	SSVVGGFVSHYLLEK	SSVVGGFVSHYLLEK	2	SSVVGGFVSHYLLEK2	11968.2	4673.86	3210.39
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	SSVVGGFVSHYLLEK	SSVVGGFVSHYLLEK	3	SSVVGGFVSHYLLEK3	52812.5	58618.7	61175.4
F1M7L9	F1M7L9	PKP2_RAT	Pkp2	Plakophilin-2	1	SSVVGGNLHR	SSVVGGNLHR	2	SSVVGGNLHR2	4768.46	2517.95	1880.93
Q62720	Q62720	ZNT1_RAT	Slc30a1	Proton-coupled zinc antiporter SLC30A1	1	SSVVPCELACR	SSVVPC(UniMod:4)ELAC(UniMod:4)R	2	SSVVPC(UniMod:4)ELAC(UniMod:4)R2	209370	184762	219449
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	SSVVTAVK	SSVVTAVK	1	SSVVTAVK1	2302.05	840.941	3125.99
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	SSVVTAVK	SSVVTAVK	2	SSVVTAVK2	394729	506253	452925
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	SSVWSAFK	SSVWSAFK	2	SSVWSAFK2	22210.1	17288.9	13404.9
Q5RJS8	Q5RJS8	TPST2_RAT	Tpst2	Protein-tyrosine sulfotransferase 2	1	SSVYLAR	SSVYLAR	2	SSVYLAR2	172007	178501	169826
A0A8I5XWD7	A0A8I5XWD7;P0C644	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	0	SSVYSPESSVR	SSVYSPESSVR	2	SSVYSPESSVR2	31134.3	29257	33613.1
B1H264	B1H264	B1H264_RAT	Tbc1d17	TBC1 domain family, member 17	1	SSWAFSVSLGELK	SSWAFSVSLGELK	2	SSWAFSVSLGELK2	3647.95	8867.38	1783.39
P51111	P51111	HD_RAT	Htt	Huntingtin	1	SSWASEEEGSSAATR	SSWASEEEGSSAATR	2	SSWASEEEGSSAATR2	33124.2	34410.8	18090.9
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	SSWEELVR	SSWEELVR	2	SSWEELVR2	12877.3	17083.6	8065.27
A0A8I6ASK1	A0A8I6ASK1	A0A8I6ASK1_RAT	P4ha2	procollagen-proline 4-dioxygenase	1	SSWLEEDDDPVVAR	SSWLEEDDDPVVAR	2	SSWLEEDDDPVVAR2	19996	15513.8	27973.7
D3Z9Y3	D3Z9Y3	D3Z9Y3_RAT	Cerk	Ceramide kinase	1	SSWNCDGEVLHSPAIEVR	SSWNC(UniMod:4)DGEVLHSPAIEVR	3	SSWNC(UniMod:4)DGEVLHSPAIEVR3	7807.45	11648	12013.6
F1LUG5	F1LUG5	F1LUG5_RAT	Tmem94	Transmembrane protein 94	1	SSWSSDEGIGEVLEK	SSWSSDEGIGEVLEK	2	SSWSSDEGIGEVLEK2		2100.73	
A0A8I6A6S4	A0A8I6A6S4	A0A8I6A6S4_RAT	Stim2	Stromal interaction molecule 2	1	SSWSVPDALQK	SSWSVPDALQK	2	SSWSVPDALQK2	12417.6	8952.61	12007.2
P16232	P16232	DHI1_RAT	Hsd11b1	11-beta-hydroxysteroid dehydrogenase 1	1	SSWTPLLLGNPGR	SSWTPLLLGNPGR	2	SSWTPLLLGNPGR2	13889.6	16937.9	22381.3
Q63768	Q63768	CRK_RAT	Crk	Adapter molecule crk	1	SSWYWGR	SSWYWGR	2	SSWYWGR2	47011.4	36731.6	34957.3
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	SSYEGQPLPK	SSYEGQPLPK	2	SSYEGQPLPK2	110126	93643.2	94468.7
D4A3I5	D4A3I5	D4A3I5_RAT	Fhip2a	FHF complex subunit HOOK interacting protein 2A	1	SSYHVEGTGYDTYLR	SSYHVEGTGYDTYLR	3	SSYHVEGTGYDTYLR3	26290.8	36722.8	31663.6
O35977	O35977	O35977_RAT	Gfra2	GDNF family receptor alpha-2	1	SSYISICNR	SSYISIC(UniMod:4)NR	2	SSYISIC(UniMod:4)NR2	26964.4	30877.3	33135.8
A0A8I6ANL9	A0A8I6ANL9	A0A8I6ANL9_RAT	Cdc23	Cell division cycle 23	1	SSYIVSQIAVAYHNIR	SSYIVSQIAVAYHNIR	3	SSYIVSQIAVAYHNIR3	13076	8956.4	3352.72
P48548	P48548	KCNJ5_RAT	Kcnj5	G protein-activated inward rectifier potassium channel 4	1	SSYMDTEVLWGHR	SSYMDTEVLWGHR	2	SSYMDTEVLWGHR2	21269.5	7453.4	37110.7
P48548	P48548	KCNJ5_RAT	Kcnj5	G protein-activated inward rectifier potassium channel 4	1	SSYMDTEVLWGHR	SSYMDTEVLWGHR	3	SSYMDTEVLWGHR3	61717.9	53596.5	68087.2
D3ZUL5	D3ZUL5	D3ZUL5_RAT	Myct1	Myc target 1	1	SSYNHGLSR	SSYNHGLSR	2	SSYNHGLSR2	63881.8	58207.5	58907
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	SSYVLSK	SSYVLSK	1	SSYVLSK1	10112.1	7756.36	10713.3
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	SSYVLSK	SSYVLSK	2	SSYVLSK2	117229	121706	160277
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	SSYYVVSGNDPAAEEPSR	SSYYVVSGNDPAAEEPSR	2	SSYYVVSGNDPAAEEPSR2	3416.9	287.119	5531.65
O55043	O55043;Q5XXR3	ARHG7_RAT	Arhgef7	Rho guanine nucleotide exchange factor 7	0	STAALEEDAQILK	STAALEEDAQILK	2	STAALEEDAQILK2	25924	26499.2	35904.2
F1M7Q7	F1M7Q7	F1M7Q7_RAT	Otud4	ubiquitinyl hydrolase 1	1	STAATDVNGFK	STAATDVNGFK	2	STAATDVNGFK2	28575.3	39204.7	26124.7
Q66HG9	Q66HG9	MAVS_RAT	Mavs	Mitochondrial antiviral-signaling protein	1	STAATPSTVPTNIAPSK	STAATPSTVPTNIAPSK	2	STAATPSTVPTNIAPSK2	128954	113316	105929
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	STACQMLVCYAK	STAC(UniMod:4)QMLVC(UniMod:4)YAK	2	STAC(UniMod:4)QMLVC(UniMod:4)YAK2	51943.6	52310.5	44043.2
B5DEZ3	B5DEZ3	B5DEZ3_RAT	Ccdc126	Coiled-coil domain containing 126	1	STADVDGGASMAGYADLK	STADVDGGASMAGYADLK	2	STADVDGGASMAGYADLK2	5599.58		
B5DEZ3	B5DEZ3	B5DEZ3_RAT	Ccdc126	Coiled-coil domain containing 126	1	STADVDGGASMAGYADLKR	STADVDGGASMAGYADLKR	3	STADVDGGASMAGYADLKR3	5151.65	5356.33	4039.92
P14659	P14659;A0A8I6AQL9;P63018;M0RCB1	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	0	STAGDTHLGGEDFDNR	STAGDTHLGGEDFDNR	2	STAGDTHLGGEDFDNR2	134110	113301	125099
P14659	P14659;A0A8I6AQL9;P63018;M0RCB1	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	0	STAGDTHLGGEDFDNR	STAGDTHLGGEDFDNR	3	STAGDTHLGGEDFDNR3	2.18972e+06	2.30587e+06	2.51289e+06
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	STAHPPSLQTSEELGCTPTPLR	STAHPPSLQTSEELGC(UniMod:4)TPTPLR	3	STAHPPSLQTSEELGC(UniMod:4)TPTPLR3	14553.9	8404.87	4311.88
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	STAHPPSLQTSEELGCTPTPLRK	STAHPPSLQTSEELGC(UniMod:4)TPTPLRK	4	STAHPPSLQTSEELGC(UniMod:4)TPTPLRK4	19288.9	18393.5	17502.6
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	STAMDTLSSLVFQLGK	STAMDTLSSLVFQLGK	2	STAMDTLSSLVFQLGK2		3580.3	
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	STANHDSESPLDAVQSPSAYHHSVPQK	STANHDSESPLDAVQSPSAYHHSVPQK	4	STANHDSESPLDAVQSPSAYHHSVPQK4	3704.94	5916.26	4158.41
D4ACK1	D4ACK1	D4ACK1_RAT	Nup214	Nucleoporin 214	1	STAPASLSR	STAPASLSR	2	STAPASLSR2	13855.6	10963.5	16233.5
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	STASALTK	STASALTK	1	STASALTK1		2273.43	
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	STASALTK	STASALTK	2	STASALTK2		15642.3	
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	STATINNIK	STATINNIK	1	STATINNIK1	14327.9	13273.5	5717.57
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	STATINNIK	STATINNIK	2	STATINNIK2	1.72972e+06	1.83075e+06	1.72313e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	STATINNIKPGADYTITLYAVTGR	STATINNIKPGADYTITLYAVTGR	3	STATINNIKPGADYTITLYAVTGR3	559479	577993	499769
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	STATINNIKPGADYTITLYAVTGR	STATINNIKPGADYTITLYAVTGR	4	STATINNIKPGADYTITLYAVTGR4	497429	567996	532493
Q6EV70	Q6EV70	OFUT1_RAT	Pofut1	GDP-fucose protein O-fucosyltransferase 1	1	STATPLTTTMCLPDLK	STATPLTTTMC(UniMod:4)LPDLK	2	STATPLTTTMC(UniMod:4)LPDLK2	3963.53	2125.15	2687.7
A0A8I6AVP7	A0A8I6AVP7	A0A8I6AVP7_RAT	Odr4	Protein odr-4 homolog	1	STATVQICSGSVNLR	STATVQIC(UniMod:4)SGSVNLR	2	STATVQIC(UniMod:4)SGSVNLR2	9234.27	5299.59	7563.82
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	STAVVEQGGIQTVDQLIK	STAVVEQGGIQTVDQLIK	2	STAVVEQGGIQTVDQLIK2	28587.5	29912.6	29268.6
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	STAVVEQGGIQTVDQLIK	STAVVEQGGIQTVDQLIK	3	STAVVEQGGIQTVDQLIK3	12749.8	19753.4	21286.3
F1LU27	F1LU27	F1LU27_RAT	Focad	Focadhesin	1	STAWLWVR	STAWLWVR	2	STAWLWVR2	3803.42	7487.85	3598.7
A0A8I5ZQ24	A0A8I5ZQ24	A0A8I5ZQ24_RAT	Atp6v1h	V-type proton ATPase subunit H	1	STAWPYFLPMLNR	STAWPYFLPMLNR	2	STAWPYFLPMLNR2	8716.58	6919.6	6723.54
Q68FS1	Q68FS1	NUBP2_RAT	Nubp2	Cytosolic Fe-S cluster assembly factor NUBP2	1	STAYSALTSIAHK	STAYSALTSIAHK	2	STAYSALTSIAHK2	4859.09	2513.91	
Q68FS1	Q68FS1	NUBP2_RAT	Nubp2	Cytosolic Fe-S cluster assembly factor NUBP2	1	STAYSALTSIAHK	STAYSALTSIAHK	3	STAYSALTSIAHK3	16186	26023.6	13718
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	STCEATGQWSR	STC(UniMod:4)EATGQWSR	2	STC(UniMod:4)EATGQWSR2	50491.7	53780.8	51423.3
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	STCEATGQWSRPLPTCHPVSCNEPPK	STC(UniMod:4)EATGQWSRPLPTC(UniMod:4)HPVSC(UniMod:4)NEPPK	4	STC(UniMod:4)EATGQWSRPLPTC(UniMod:4)HPVSC(UniMod:4)NEPPK4	9568.1	19066	
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	STCGSVR	STC(UniMod:4)GSVR	2	STC(UniMod:4)GSVR2			66699.3
A0A8I5XWT0	A0A8I5XWT0	A0A8I5XWT0_RAT	Cd55	CD55 molecule (Cromer blood group)	1	STCLEELVWSPVVEFCK	STC(UniMod:4)LEELVWSPVVEFC(UniMod:4)K	3	STC(UniMod:4)LEELVWSPVVEFC(UniMod:4)K3	84532.9	118636	87239.1
A0A8I5XWT0	A0A8I5XWT0	A0A8I5XWT0_RAT	Cd55	CD55 molecule (Cromer blood group)	1	STCLEELVWSPVVEFCKK	STC(UniMod:4)LEELVWSPVVEFC(UniMod:4)KK	3	STC(UniMod:4)LEELVWSPVVEFC(UniMod:4)KK3	6630.87	10271.2	12963
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	STCLPMFGYK	STC(UniMod:4)LPMFGYK	2	STC(UniMod:4)LPMFGYK2	5.45399e+06	5.51561e+06	6.27215e+06
P04906	P04906	GSTP1_RAT	Gstp1	Glutathione S-transferase P	1	STCLYGQLPK	STC(UniMod:4)LYGQLPK	2	STC(UniMod:4)LYGQLPK2	270893	253738	288469
F1M9Q3	F1M9Q3	F1M9Q3_RAT	Ltn1	E3 ubiquitin-protein ligase listerin	1	STCPLCR	STC(UniMod:4)PLC(UniMod:4)R	2	STC(UniMod:4)PLC(UniMod:4)R2	25426	35757.7	29996.8
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	STCQFMCDEGFYLSGPER	STC(UniMod:4)QFMC(UniMod:4)DEGFYLSGPER	3	STC(UniMod:4)QFMC(UniMod:4)DEGFYLSGPER3	72876.6	86430.8	76942.8
Q9Z244	Q9Z244	GMPR1_RAT	Gmpr	GMP reductase 1	1	STCTYVGAAK	STC(UniMod:4)TYVGAAK	2	STC(UniMod:4)TYVGAAK2	163586	128746	145127
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	STCVLEAFGNAR	STC(UniMod:4)VLEAFGNAR	2	STC(UniMod:4)VLEAFGNAR2	48361.5	54807.6	47658.8
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	STCYGGYR	STC(UniMod:4)YGGYR	2	STC(UniMod:4)YGGYR2	59670.8	60926	71193.2
A0A8I6A9M1	A0A8I6A9M1	A0A8I6A9M1_RAT	Cmip	C-Maf-inducing protein	1	STDADLAR	STDADLAR	2	STDADLAR2	3766	7506.57	10737.6
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	STDAVAGPASSLK	STDAVAGPASSLK	2	STDAVAGPASSLK2	16638.6	10851.3	17605.8
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	STDEVDSK	STDEVDSK	1	STDEVDSK1			15884.5
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	STDEVDSK	STDEVDSK	2	STDEVDSK2			292745
A0A8I5ZZK5	A0A8I5ZZK5	A0A8I5ZZK5_RAT	Bank1	B-cell scaffold protein with ankyrin repeats 1	1	STDGSDLLHIAER	STDGSDLLHIAER	3	STDGSDLLHIAER3	9053.4	21701.2	13551.5
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	STDLFDELVAHEVAR	STDLFDELVAHEVAR	3	STDLFDELVAHEVAR3	24636.2	18639.3	17595.7
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	STDLNESR	STDLNESR	2	STDLNESR2			15122.5
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	STDPDRFQVMFCYFEDK	STDPDRFQVMFC(UniMod:4)YFEDK	3	STDPDRFQVMFC(UniMod:4)YFEDK3	4420.44	2327.75	
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	STDPTMIK	STDPTMIK	2	STDPTMIK2	285440	313067	248498
A0A8I5Y176	A0A8I5Y176	A0A8I5Y176_RAT	Ranbp9	RAN binding protein 9	1	STDQTVLEELASIK	STDQTVLEELASIK	2	STDQTVLEELASIK2	4033.92	3326.1	15291.2
Q5RJS8	Q5RJS8	TPST2_RAT	Tpst2	Protein-tyrosine sulfotransferase 2	1	STDQVIKPVNLEALSK	STDQVIKPVNLEALSK	2	STDQVIKPVNLEALSK2	7224.73	5484.68	4261.87
Q5RJS8	Q5RJS8	TPST2_RAT	Tpst2	Protein-tyrosine sulfotransferase 2	1	STDQVIKPVNLEALSK	STDQVIKPVNLEALSK	3	STDQVIKPVNLEALSK3	64392.4	61720.4	68371.1
Q3KR92	Q3KR92	TPST1_RAT	Tpst1	Protein-tyrosine sulfotransferase 1	1	STDQVIKPVNVGALSK	STDQVIKPVNVGALSK	3	STDQVIKPVNVGALSK3	8928.38	9240	11276.3
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	STDRLPSAHTCFNQLDLPAYESFEK	STDRLPSAHTC(UniMod:4)FNQLDLPAYESFEK	4	STDRLPSAHTC(UniMod:4)FNQLDLPAYESFEK4	40347.3	37828.9	25472.9
D3ZUV9	D3ZUV9	D3ZUV9_RAT	Cnot3	CCR4-NOT transcription complex, subunit 3	1	STDSEVSQSPAK	STDSEVSQSPAK	2	STDSEVSQSPAK2	17393.6	14491	16394.1
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	STDSPEFK	STDSPEFK	2	STDSPEFK2	44052.5	48363.3	44976.7
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	STDSPEFKEQFK	STDSPEFKEQFK	3	STDSPEFKEQFK3	13788.7	16572.5	17442
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	STDSQCGTVIDVNIDCAVK	STDSQC(UniMod:4)GTVIDVNIDC(UniMod:4)AVK	3	STDSQC(UniMod:4)GTVIDVNIDC(UniMod:4)AVK3	16102.9	16761.7	15493.9
P34900	P34900	SDC2_RAT	Sdc2	Syndecan-2	1	STDVYTEK	STDVYTEK	2	STDVYTEK2	10315.3		
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	STDYANFYQGLWDCTGSLSDELSFK	STDYANFYQGLWDC(UniMod:4)TGSLSDELSFK	3	STDYANFYQGLWDC(UniMod:4)TGSLSDELSFK3	32876.9	28859.7	17114.5
P27590	P27590	UROM_RAT	Umod	Uromodulin	1	STDYGAGYSCDSDMHGWYR	STDYGAGYSC(UniMod:4)DSDMHGWYR	3	STDYGAGYSC(UniMod:4)DSDMHGWYR3	6151.5	2491.5	4370.34
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	STEAESILHSEGSR	STEAESILHSEGSR	3	STEAESILHSEGSR3	25660.5	13399.5	29704.5
A0A8I6AS17	A0A8I6AS17	A0A8I6AS17_RAT	Bsdc1	BSD domain containing 1	1	STEALEFMK	STEALEFMK	2	STEALEFMK2	26293.2	26020.5	31235
Q80Z29	Q80Z29	NAMPT_RAT	Nampt	Nicotinamide phosphoribosyltransferase	1	STEAPLIIRPDSGNPLDTVLK	STEAPLIIRPDSGNPLDTVLK	3	STEAPLIIRPDSGNPLDTVLK3	19200.3	27872	18407.2
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	STEDFNK	STEDFNK	2	STEDFNK2	56929.9	69519.1	64867.1
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	STEDLSPQR	STEDLSPQR	2	STEDLSPQR2	2249.11	6785.11	3227.06
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	STEEPIVK	STEEPIVK	2	STEEPIVK2	21402.1	23144.7	24170.6
Q5M880	Q5M880	S66A2_RAT	Slc66a2	Solute carrier family 66 member 2	1	STEGMSLK	STEGMSLK	2	STEGMSLK2	26876	24603.7	18434.4
Q09326	Q09326	MGAT2_RAT	Mgat2	Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	1	STEHNMGLALTR	STEHNMGLALTR	2	STEHNMGLALTR2	4681.79		3266.56
Q09326	Q09326	MGAT2_RAT	Mgat2	Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	1	STEHNMGLALTR	STEHNMGLALTR	3	STEHNMGLALTR3	32024.4	45182.4	36079.8
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	STELCAGHLAGGIDSCQGDSGGPLVCFEK	STELC(UniMod:4)AGHLAGGIDSC(UniMod:4)QGDSGGPLVC(UniMod:4)FEK	4	STELC(UniMod:4)AGHLAGGIDSC(UniMod:4)QGDSGGPLVC(UniMod:4)FEK4	1142.81	1968.9	3708.21
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	STELCGQWQGR	STELC(UniMod:4)GQWQGR	2	STELC(UniMod:4)GQWQGR2	52575.1	51777.9	53572.7
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	STELIPR	STELIPR	2	STELIPR2	119597	147570	144861
P84245;Q6LED0	A0A8I6A289;A0A8I6G2H8;P84245;D3ZJ08;Q6LED0;D3ZK97	H31_RAT;H33_RAT	H3-3b	Histone H3.3	0	STELLIR	STELLIR	2	STELLIR2	128624	68924.4	59820.8
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	STELNEEPLMR	STELNEEPLMR	2	STELNEEPLMR2	2875.61	5817.09	6082.59
P62025	P62025	PHAR2_RAT	Phactr2	Phosphatase and actin regulator 2	1	STEMEVHEESR	STEMEVHEESR	3	STEMEVHEESR3	6751.47	3874.07	9901.78
P41123	D3ZD02;F1M2E9;A0A8I5ZNK4;P41123	RL13_RAT	Rpl13	Large ribosomal subunit protein eL13	0	STESLQANVQR	STESLQANVQR	2	STESLQANVQR2	22299.1	26038.5	14552
Q3B7U9	Q3B7U9	FKBP8_RAT	Fkbp8	Peptidyl-prolyl cis-trans isomerase FKBP8	1	STETALYR	STETALYR	2	STETALYR2	40427.9	32522.2	37941.4
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	STETSDFENIESPLNER	STETSDFENIESPLNER	3	STETSDFENIESPLNER3	9259.48	11528.5	8456.72
P09215	P09215	KPCD_RAT	Prkcd	Protein kinase C delta type	1	STFDAHIYEGR	STFDAHIYEGR	3	STFDAHIYEGR3	34160.8	25931	20954.2
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	STFDTFNWFTK	STFDTFNWFTK	2	STFDTFNWFTK2	322243	334062	358117
Q8CHI9	Q8CHI9	CHSTF_RAT	Chst15	Carbohydrate sulfotransferase 15	1	STFDTLR	STFDTLR	2	STFDTLR2	25116.2	20277.2	19613
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	STFEEEGR	STFEEEGR	2	STFEEEGR2	9150.19	5821.6	6250.23
O08679	O08679	MARK2_RAT	Mark2	Serine/threonine-protein kinase MARK2	1	STFHAGQLR	STFHAGQLR	2	STFHAGQLR2	5892.03	2806.18	3856.15
P08650	P08650	CO5_RAT	C5	Complement C5	1	STFTLAIVAYALSLGDR	STFTLAIVAYALSLGDR	2	STFTLAIVAYALSLGDR2	1289.04	5789.52	
P08650	P08650	CO5_RAT	C5	Complement C5	1	STFTLAIVAYALSLGDRTHPK	STFTLAIVAYALSLGDRTHPK	4	STFTLAIVAYALSLGDRTHPK4	10466.2	9307.85	4180.67
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	STFTLLWPSH	STFTLLWPSH	2	STFTLLWPSH2	50529.8	90771.3	65809
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	STFTLSCDGSLHHK	STFTLSC(UniMod:4)DGSLHHK	2	STFTLSC(UniMod:4)DGSLHHK2	164125	125100	111572
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	STFTLSCDGSLHHK	STFTLSC(UniMod:4)DGSLHHK	3	STFTLSC(UniMod:4)DGSLHHK3	154840	193809	274930
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	STFTLSCDGSLHHK	STFTLSC(UniMod:4)DGSLHHK	4	STFTLSC(UniMod:4)DGSLHHK4	402000	560532	398496
Q68FR6	Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	1	STFVLDEFK	STFVLDEFK	2	STFVLDEFK2	632252	664651	687967
Q68FR6	Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	1	STFVLDEFKR	STFVLDEFKR	2	STFVLDEFKR2	392081	452180	337462
Q68FR6	Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	1	STFVLDEFKR	STFVLDEFKR	3	STFVLDEFKR3	1.02035e+06	1.07335e+06	1.14979e+06
Q5RJM1	Q5RJM1	PORED_RAT	Srd5a3	Polyprenol reductase	1	STFVSYPK	STFVSYPK	2	STFVSYPK2	135981	175366	162441
A0A0G2K5N0	D4ABZ4;A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	0	STGAEPGLAR	STGAEPGLAR	2	STGAEPGLAR2	87649.1	91856.8	87304
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	STGASFIR	STGASFIR	2	STGASFIR2	66801.1	79735.1	81475
B2GV06	B2GV06	SCOT1_RAT	Oxct1	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial	1	STGCDFAVSPNLMPMQQIST	STGC(UniMod:4)DFAVSPNLMPMQQIST	3	STGC(UniMod:4)DFAVSPNLMPMQQIST3		2759.06	6231.97
Q63433	Q63433	PKN1_RAT	Pkn1	Serine/threonine-protein kinase N1	1	STGDISMEK	STGDISMEK	2	STGDISMEK2	10570.9	14791.4	8244.25
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	STGDVVAGR	STGDVVAGR	2	STGDVVAGR2	55948.2	56478.4	44180.5
Q8VHV7	Q8VHV7;Q6AY09	HNRH1_RAT	Hnrnph1	Heterogeneous nuclear ribonucleoprotein H	0	STGEAFVQFASQEIAEK	STGEAFVQFASQEIAEK	2	STGEAFVQFASQEIAEK2	6827.91	8262.5	4041.01
Q5XI07	Q5XI07	LPP_RAT	Lpp	Lipoma-preferred partner homolog	1	STGEPLGHVPAR	STGEPLGHVPAR	2	STGEPLGHVPAR2	18976.5	23554	8443.22
Q5XI07	Q5XI07	LPP_RAT	Lpp	Lipoma-preferred partner homolog	1	STGEPLGHVPAR	STGEPLGHVPAR	3	STGEPLGHVPAR3	37246.1	38656.7	28309.5
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	STGEPQGVIR	STGEPQGVIR	2	STGEPQGVIR2	161326	135399	127536
P62963	P62963	PROF1_RAT	Pfn1	Profilin-1	1	STGGAPTFNVTVTMTAK	STGGAPTFNVTVTMTAK	2	STGGAPTFNVTVTMTAK2	456318	226112	361538
P62963	P62963	PROF1_RAT	Pfn1	Profilin-1	1	STGGAPTFNVTVTMTAK	STGGAPTFNVTVTMTAK	3	STGGAPTFNVTVTMTAK3	23246.9	16997.9	13674.3
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	STGGPGAGLCMFPLEK	STGGPGAGLC(UniMod:4)MFPLEK	2	STGGPGAGLC(UniMod:4)MFPLEK2	60189.8	71561.6	60953.3
A0A0G2K6R0	A0A0G2K6R0	A0A0G2K6R0_RAT	Tnrc6b	Trinucleotide repeat containing adaptor 6B	1	STGGSWNFGPQDSNDNK	STGGSWNFGPQDSNDNK	2	STGGSWNFGPQDSNDNK2	2349.9		3280.03
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	STGGTPPDSSLVTYELHSRPEQDK	STGGTPPDSSLVTYELHSRPEQDK	3	STGGTPPDSSLVTYELHSRPEQDK3	71129.8	73305.6	54161.4
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	STGGTPPDSSLVTYELHSRPEQDK	STGGTPPDSSLVTYELHSRPEQDK	4	STGGTPPDSSLVTYELHSRPEQDK4	205270	166475	253373
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	STGHCSCRPGVSGVR	STGHC(UniMod:4)SC(UniMod:4)RPGVSGVR	4	STGHC(UniMod:4)SC(UniMod:4)RPGVSGVR4			8738.43
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	STGIDAIHPNK	STGIDAIHPNK	2	STGIDAIHPNK2	104883	70058.2	57432.3
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	STGIDAIHPNK	STGIDAIHPNK	3	STGIDAIHPNK3	157766	147106	116845
Q4KM87	Q4KM87	Q4KM87_RAT	Actl6a	Actin-like 6A	1	STGLILDSGATHTTAIPVHDGYVLQQGIVK	STGLILDSGATHTTAIPVHDGYVLQQGIVK	4	STGLILDSGATHTTAIPVHDGYVLQQGIVK4	18321	9030.87	9138.76
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	STGLQYAAK	STGLQYAAK	2	STGLQYAAK2	14096.4	13489.8	21881.2
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	STGLSVFNGGTELQNQTDLLSLSGR	STGLSVFNGGTELQNQTDLLSLSGR	3	STGLSVFNGGTELQNQTDLLSLSGR3	5477.51	7174.37	4454.24
Q5PQM0	Q5PQM0	TM168_RAT	Tmem168	Transmembrane protein 168	1	STGMLNAIQR	STGMLNAIQR	2	STGMLNAIQR2	22549.9	19457.2	9394.62
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	STGNFLTLSQAVDK	STGNFLTLSQAVDK	2	STGNFLTLSQAVDK2	19779.1	20905.7	29374.9
A0A8I6A3F2	A0A8I6A3F2	A0A8I6A3F2_RAT	AABR07034730.2	Ig-like domain-containing protein	1	STGNIGSNYVNWYQQHEGR	STGNIGSNYVNWYQQHEGR	3	STGNIGSNYVNWYQQHEGR3	219514	190465	204195
Q63400	Q63400	CLD3_RAT	Cldn3	Claudin-3	1	STGPGTGTGTAYDR	STGPGTGTGTAYDR	2	STGPGTGTGTAYDR2			3040.62
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	STGQLNVSPGTPSGSTATAER	STGQLNVSPGTPSGSTATAER	3	STGQLNVSPGTPSGSTATAER3	18282.6	14502.3	12396.1
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	STGQPDQNMVPTPAPR	STGQPDQNMVPTPAPR	2	STGQPDQNMVPTPAPR2	81436.5	94111.1	63450
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	STGQPDQNMVPTPAPR	STGQPDQNMVPTPAPR	3	STGQPDQNMVPTPAPR3	28019.9	28794.4	22987.1
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	STGSFVGELMYK	STGSFVGELMYK	2	STGSFVGELMYK2	57602.3	57401.3	64179.8
Q9QYP1	Q9QYP1	LRP4_RAT	Lrp4	Low-density lipoprotein receptor-related protein 4	1	STGSNVILVR	STGSNVILVR	2	STGSNVILVR2	4378.49	2869.15	5797.01
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	STGSQSMEGASVK	STGSQSMEGASVK	2	STGSQSMEGASVK2	6447.38	4393.75	4071.14
P0C2X9	P0C2X9	AL4A1_RAT	Aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1	STGSVVGQQPFGGAR	STGSVVGQQPFGGAR	2	STGSVVGQQPFGGAR2	73766.2	65961.7	86715.9
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	STGTFVVSQPLNYR	STGTFVVSQPLNYR	2	STGTFVVSQPLNYR2	8212.09	14872.7	8611.02
F1LMI3	F1LMI3	F1LMI3_RAT	Cdh3	Cadherin 3	1	STGTISVISSGLDR	STGTISVISSGLDR	2	STGTISVISSGLDR2	12048.5	13181.2	13114.5
D3ZRI9	D3ZRI9	D3ZRI9_RAT	Gan	Gigaxonin	1	STGTWHHTKPLLPSDLR	STGTWHHTKPLLPSDLR	4	STGTWHHTKPLLPSDLR4	26151.8	20312.7	22945.9
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	STGVFQDEELLFSHK	STGVFQDEELLFSHK	2	STGVFQDEELLFSHK2	2474.47	2387.1	1528.58
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	STGVFQDEELLFSHK	STGVFQDEELLFSHK	3	STGVFQDEELLFSHK3	11133.3	5011.81	15975
Q62609	Q62609	NOE1_RAT	Olfm1	Noelin	1	STGVLPTNPEESWQVYSSAQDSEGR	STGVLPTNPEESWQVYSSAQDSEGR	3	STGVLPTNPEESWQVYSSAQDSEGR3	5159.81		
A0A8I6A3Z5	A0A8I6A3Z5	A0A8I6A3Z5_RAT	Uba2	SUMO-activating enzyme subunit 2	1	STGYDPVK	STGYDPVK	2	STGYDPVK2	13544.2	11302.7	
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	STGYSSQPGAK	STGYSSQPGAK	2	STGYSSQPGAK2			7952.07
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	STHEFLHEVPVASEEIFK	STHEFLHEVPVASEEIFK	3	STHEFLHEVPVASEEIFK3	19363.1	15595.9	14143.6
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	STHEFLHEVPVASEEIFK	STHEFLHEVPVASEEIFK	4	STHEFLHEVPVASEEIFK4	25405	17538.7	22905.1
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	STHEILQK	STHEILQK	2	STHEILQK2	4842.63	7129.02	3516.17
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	STHFEVK	STHFEVK	1	STHFEVK1	1.79446e+06	1.71395e+06	1.95321e+06
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	STHFEVK	STHFEVK	2	STHFEVK2	7.56603e+06	6.80483e+06	6.87594e+06
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	STHFEVKK	STHFEVKK	1	STHFEVKK1	25706.7		39547.6
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	STHFEVKK	STHFEVKK	2	STHFEVKK2	380491		765059
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	STHGLAILGPENSK	STHGLAILGPENSK	2	STHGLAILGPENSK2	4340.59		3338.85
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	STHGLAILGPENSK	STHGLAILGPENSK	3	STHGLAILGPENSK3	19400.3	36761.3	26016.4
B2RYD7	B2RYD7	B2RYD7_RAT	Stt3b	dolichyl-diphosphooligosaccharide--protein glycotransferase	1	STHHLASHGFYEFLNWFDER	STHHLASHGFYEFLNWFDER	4	STHHLASHGFYEFLNWFDER4	19924.2	12139.1	16498.2
D3ZXB1	D3ZXB1	D3ZXB1_RAT	Map4k2	Mitogen-activated protein kinase kinase kinase kinase 2	1	STHIWAHDLPGLFEQR	STHIWAHDLPGLFEQR	2	STHIWAHDLPGLFEQR2			923.168
D3ZXB1	D3ZXB1	D3ZXB1_RAT	Map4k2	Mitogen-activated protein kinase kinase kinase kinase 2	1	STHIWAHDLPGLFEQR	STHIWAHDLPGLFEQR	4	STHIWAHDLPGLFEQR4			4825.39
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	STHNCDRPPSTGVMECR	STHNC(UniMod:4)DRPPSTGVMEC(UniMod:4)R	4	STHNC(UniMod:4)DRPPSTGVMEC(UniMod:4)R4	52352.7	63022.2	59798.6
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	STHQAAVVSK	STHQAAVVSK	2	STHQAAVVSK2			18283.9
F1M8H2	F1M8H2	F1M8H2_RAT	Wars2	tryptophan--tRNA ligase	1	STHVPVGEDQVQHMELVQDLAR	STHVPVGEDQVQHMELVQDLAR	3	STHVPVGEDQVQHMELVQDLAR3	12978.1		
F1M8H2	F1M8H2	F1M8H2_RAT	Wars2	tryptophan--tRNA ligase	1	STHVPVGEDQVQHMELVQDLAR	STHVPVGEDQVQHMELVQDLAR	4	STHVPVGEDQVQHMELVQDLAR4	16337.3	15184.7	10390.3
F1M8V2	F1M8V2	F1M8V2_RAT	Ube4b	Ubiquitin conjugation factor E4	1	STIAIEK	STIAIEK	2	STIAIEK2	19489.3	24508.3	23834
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	STIFIPPSSVK	STIFIPPSSVK	2	STIFIPPSSVK2	36484.3	20233.3	31076.1
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	STIFYYVQK	STIFYYVQK	2	STIFYYVQK2	8988.99	4497.38	
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	STIGGQIMYLTGMVDK	STIGGQIMYLTGMVDK	2	STIGGQIMYLTGMVDK2	75330.3	61578.6	63309.6
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	STIGGQIMYLTGMVDK	STIGGQIMYLTGMVDK	3	STIGGQIMYLTGMVDK3	11058.5	5578.27	3023.13
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	STIGGQIMYLTGMVDKR	STIGGQIMYLTGMVDKR	2	STIGGQIMYLTGMVDKR2	7188.93	9729.21	12210.4
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	STIGGQIMYLTGMVDKR	STIGGQIMYLTGMVDKR	3	STIGGQIMYLTGMVDKR3	92078.8	106006	103123
O35509	O35509;P62494	RB11B_RAT	Rab11b	Ras-related protein Rab-11B	0	STIGVEFATR	STIGVEFATR	2	STIGVEFATR2	541340	471912	553875
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	STIIGESMSR	STIIGESMSR	2	STIIGESMSR2	92013.3	72701.4	79030
Q6P691	Q6P691	Q6P691_RAT	C2cd2	C2 calcium-dependent domain containing 2	1	STIIISGISK	STIIISGISK	2	STIIISGISK2	23958.4	23569.1	27499.2
Q6IE70	Q6IE70	PAN2_RAT	Pan2	PAN2-PAN3 deadenylation complex catalytic subunit Pan2	1	STIKPSQMSVAR	STIKPSQMSVAR	3	STIKPSQMSVAR3	5311.22	8422.77	5429.1
D4A748	D4A748	D4A748_RAT	Wdfy4	WDFY family member 4	1	STILGFVSNFGQVPK	STILGFVSNFGQVPK	2	STILGFVSNFGQVPK2	5304.78		4375.25
P97544	P97544	PLPP3_RAT	Plpp3	Phospholipid phosphatase 3	1	STIQNPYVAALYK	STIQNPYVAALYK	2	STIQNPYVAALYK2	9479.28	4451.18	14752.2
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	STISEIK	STISEIK	2	STISEIK2	30363.8	21382	27765.2
Q68FS1	Q68FS1	NUBP2_RAT	Nubp2	Cytosolic Fe-S cluster assembly factor NUBP2	1	STISTELALALR	STISTELALALR	2	STISTELALALR2	7222.95	4976.17	3315.66
A0A8I6A9W1	A0A8I6A9W1	A0A8I6A9W1_RAT	ENSRNOG00000065670	Ig-like domain-containing protein	1	STITIPCER	STITIPC(UniMod:4)ER	2	STITIPC(UniMod:4)ER2	4.30066e+06	3.77172e+06	4.12808e+06
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	STIVDCLK	STIVDC(UniMod:4)LK	2	STIVDC(UniMod:4)LK2	97374.6	89869.1	71635.8
M0R402	M0R402	M0R402_RAT	Tmx3	Thioredoxin-related transmembrane protein 3	1	STIVSIFK	STIVSIFK	2	STIVSIFK2	94857.7	68488.8	86063.4
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	STKFSIYNNMFCAGYR	STKFSIYNNMFC(UniMod:4)AGYR	3	STKFSIYNNMFC(UniMod:4)AGYR3	65925.9	46376	34876.8
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	STKFSIYNNMFCAGYREGGK	STKFSIYNNMFC(UniMod:4)AGYREGGK	4	STKFSIYNNMFC(UniMod:4)AGYREGGK4	4199.47		6780.11
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	STKPPLDR	STKPPLDR	2	STKPPLDR2		221915	
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	STKPSLQIQK	STKPSLQIQK	2	STKPSLQIQK2	1.1084e+06	1.23532e+06	1.13391e+06
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	STKPSLSPGKPQSSLVIPTSLFCK	STKPSLSPGKPQSSLVIPTSLFC(UniMod:4)K	3	STKPSLSPGKPQSSLVIPTSLFC(UniMod:4)K3	57549.2	70686.3	47008.5
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	STKPSLSPGKPQSSLVIPTSLFCK	STKPSLSPGKPQSSLVIPTSLFC(UniMod:4)K	4	STKPSLSPGKPQSSLVIPTSLFC(UniMod:4)K4	137238	149117	142423
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	STLAIDWDSETR	STLAIDWDSETR	2	STLAIDWDSETR2	25439.4	37451.9	33746.4
Q9EQ60	Q9EQ60	CAC1H_RAT	Cacna1h	Voltage-dependent T-type calcium channel subunit alpha-1H	1	STLDLCPPR	STLDLC(UniMod:4)PPR	2	STLDLC(UniMod:4)PPR2	9084.48	15822	
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	STLEVLQLFPINIK	STLEVLQLFPINIK	2	STLEVLQLFPINIK2	7018.61	3150.47	7448.08
Q5I0D7	Q5I0D7	PEPD_RAT	Pepd	Xaa-Pro dipeptidase	1	STLFVPR	STLFVPR	2	STLFVPR2	20234.6	28631.5	29602
D3ZA32	D3ZA32	D3ZA32_RAT	Gsdma	Gasdermin A	1	STLFWGAR	STLFWGAR	2	STLFWGAR2	19390.6	10591.6	14043.3
A0A8I6A1Y5	A0A8I6A1Y5	A0A8I6A1Y5_RAT	LOC679594	Similar to polyubiquitin	1	STLHLVLR	STLHLVLR	2	STLHLVLR2	22146.3	15580.5	15737.1
F7EUW3	F7EUW3	F7EUW3_RAT	C2cd2l	C2CD2-like	1	STLIISGVSK	STLIISGVSK	2	STLIISGVSK2	26445.8	22384.6	33753.1
Q91Y81	Q91Y81	SEPT2_RAT	Septin2	Septin-2	1	STLINSLFLTDLYPER	STLINSLFLTDLYPER	2	STLINSLFLTDLYPER2	30520.1	26987.5	27597.3
Q91Y81	Q91Y81	SEPT2_RAT	Septin2	Septin-2	1	STLINSLFLTDLYPER	STLINSLFLTDLYPER	3	STLINSLFLTDLYPER3	7115.8	6499.02	7732.12
Q9WVC0	Q9WVC0	SEPT7_RAT	Septin7	Septin-7	1	STLINSLFLTDLYSPEYPGPSHR	STLINSLFLTDLYSPEYPGPSHR	3	STLINSLFLTDLYSPEYPGPSHR3	58508.6	50299.9	66558.4
Q9QZR6	Q9QZR6	SEPT9_RAT	Septin9	Septin-9	1	STLINTLFK	STLINTLFK	2	STLINTLFK2	10775.3	16597.8	9350.83
A0A8I6ALF3	A0A8I6ALF3	A0A8I6ALF3_RAT	Fam117b	Family with sequence similarity 117, member B	1	STLIPAGPITK	STLIPAGPITK	2	STLIPAGPITK2	17827.9	25163.9	25701.9
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	STLITFLCDR	STLITFLC(UniMod:4)DR	2	STLITFLC(UniMod:4)DR2	18156.9	11008.5	12687
D3ZM19	D3ZM19	D3ZM19_RAT	Evi2b	Ecotropic viral integration site 2B	1	STLLADDLEVK	STLLADDLEVK	2	STLLADDLEVK2	400599	383433	376965
D3ZRJ7	D3ZRJ7	D3ZRJ7_RAT	Lrrk1	non-specific serine/threonine protein kinase	1	STLLEILQTGK	STLLEILQTGK	2	STLLEILQTGK2	6019.97	7686.22	7075.48
A0A8I6AE33	A0A8I6AE33	A0A8I6AE33_RAT	Wdr37	WD repeat domain 37	1	STLLELFGQIER	STLLELFGQIER	2	STLLELFGQIER2	25002.6	12228.5	23288.2
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	STLLFGQR	STLLFGQR	2	STLLFGQR2	287944	312864	290045
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	STLLGVLTHGELDNGR	STLLGVLTHGELDNGR	2	STLLGVLTHGELDNGR2	11442.3	10592.1	6286.46
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	STLLGVLTHGELDNGR	STLLGVLTHGELDNGR	3	STLLGVLTHGELDNGR3	108851	111545	114997
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	STLLGVLTQGELDNGR	STLLGVLTQGELDNGR	2	STLLGVLTQGELDNGR2	46903.1	52110.8	35159.5
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	STLLLLLTGK	STLLLLLTGK	2	STLLLLLTGK2	52364	82794.1	76220.2
B3GNI6	A0A8I6AA08;B3GNI6	SEP11_RAT	Septin11	Septin-11	0	STLMDTLFNTK	STLMDTLFNTK	2	STLMDTLFNTK2	153090	120764	146635
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	STLMGHMLYLLGNVNK	STLMGHMLYLLGNVNK	3	STLMGHMLYLLGNVNK3	15867.9	18498	6439.05
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	STLMNLSK	STLMNLSK	2	STLMNLSK2	108910	89174.4	97321.8
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	STLNEIYFGK	STLNEIYFGK	2	STLNEIYFGK2	496362	442138	551418
A0A8I5ZMG6	A0A8I5ZMG6	A0A8I5ZMG6_RAT	Ppp2r5e	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	1	STLNELVDYITISR	STLNELVDYITISR	3	STLNELVDYITISR3	9472.44	17233.2	2758.41
A0A0G2JYE0	A0A0G2JYE0;A0A8I6ATU9	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	0	STLNPNAK	STLNPNAK	2	STLNPNAK2	41689.5	42748.4	41194.3
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	STLNPQWNESFTFK	STLNPQWNESFTFK	2	STLNPQWNESFTFK2	43586.6	37328.6	48140.1
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	STLNPQWNESFTFK	STLNPQWNESFTFK	3	STLNPQWNESFTFK3	7590.09	6009.08	7027.27
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	STLNSWEK	STLNSWEK	1	STLNSWEK1	2675.61	2906.68	2472.7
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	STLNSWEK	STLNSWEK	2	STLNSWEK2	713145	790987	774983
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	STLPDADR	STLPDADR	2	STLPDADR2	106963	94515.2	110302
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	STLPDADRER	STLPDADRER	2	STLPDADRER2	34246	31219.5	13722.6
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	STLPDADRER	STLPDADRER	3	STLPDADRER3	1.86225e+06	2.21156e+06	2.79704e+06
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	STLPVDEGSPLEK	STLPVDEGSPLEK	2	STLPVDEGSPLEK2	81336.6	113470	87523.3
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	STLQTLPEIVAK	STLQTLPEIVAK	2	STLQTLPEIVAK2	75897.2	88512	83828.6
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	STLSPDQQLTAWSYDQLPK	STLSPDQQLTAWSYDQLPK	3	STLSPDQQLTAWSYDQLPK3	15923.6	11940.9	11440.6
Q6P9U3	Q6P9U3	COMD3_RAT	Commd3	COMM domain-containing protein 3	1	STLSTYLEDCK	STLSTYLEDC(UniMod:4)K	2	STLSTYLEDC(UniMod:4)K2	6099.43	7593.96	7791.04
D3ZW15	D3ZW15	D3ZW15_RAT	Sec24b	SEC24 homolog B, COPII coat complex component	1	STLTAPSSLK	STLTAPSSLK	2	STLTAPSSLK2	15336.3	13566.1	22029.8
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	STLTAVCEER	STLTAVC(UniMod:4)EER	2	STLTAVC(UniMod:4)EER2	13222.9	11234.9	12634.6
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	STLTAVCEERDQLLYR	STLTAVC(UniMod:4)EERDQLLYR	3	STLTAVC(UniMod:4)EERDQLLYR3	14924.7	13176.9	31589.1
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	STLTDSLVCK	STLTDSLVC(UniMod:4)K	2	STLTDSLVC(UniMod:4)K2	110392	118819	121181
A0A8I6A502	A0A8I6A502	A0A8I6A502_RAT	Tns3	Tensin 3	1	STLTLLGNNRPSESPLGTHEFCSSGK	STLTLLGNNRPSESPLGTHEFC(UniMod:4)SSGK	4	STLTLLGNNRPSESPLGTHEFC(UniMod:4)SSGK4	3241.46	4772.08	
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	STLVAGSVVMAFEEVCPDR	STLVAGSVVMAFEEVC(UniMod:4)PDR	3	STLVAGSVVMAFEEVC(UniMod:4)PDR3	5822.53	5865.86	2706.73
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	STLVAGSVVMAFEEVCPDRIDLIHR	STLVAGSVVMAFEEVC(UniMod:4)PDRIDLIHR	4	STLVAGSVVMAFEEVC(UniMod:4)PDRIDLIHR4	25923.4	39129.7	22056.5
Q9R085	Q9R085;B2GUZ1	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	0	STLVCPECAK	STLVC(UniMod:4)PEC(UniMod:4)AK	2	STLVC(UniMod:4)PEC(UniMod:4)AK2	283828	310597	278333
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	STLVDALCR	STLVDALC(UniMod:4)R	2	STLVDALC(UniMod:4)R2	120239	110434	116892
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	STLVESLK	STLVESLK	2	STLVESLK2	27584.5	16961.2	13318.2
Q9JJM9	Q9JJM9	SEPT5_RAT	Septin5	Septin-5	1	STLVHSLFLTDLYK	STLVHSLFLTDLYK	2	STLVHSLFLTDLYK2	9782.06	5798	9328.82
Q9JJM9	Q9JJM9	SEPT5_RAT	Septin5	Septin-5	1	STLVHSLFLTDLYK	STLVHSLFLTDLYK	3	STLVHSLFLTDLYK3	28899.1	21311.6	27719.4
F1LXF1	A0A0G2JTR4;F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	0	STLVLHDLLK	STLVLHDLLK	2	STLVLHDLLK2	12754.6	14692.5	7124.46
Q6TA25	Q6TA25	FGOP2_RAT	Fgfr1op2	FGFR1 oncogene partner 2 homolog	1	STLVMGIQQENR	STLVMGIQQENR	2	STLVMGIQQENR2	48839.8	54216.3	60019.2
Q9ERE6	Q9ERE6	MPRIP_RAT	Mprip	Myosin phosphatase Rho-interacting protein	1	STLWQEEMR	STLWQEEMR	2	STLWQEEMR2	2595.08	3705.77	
A0A8I6AEV5	F1LYU3;A0A8I6AM09;A0A8I6AEB7;A0A8I6AEV5;A0A8I6AKK2;A0A8I5Y662	A0A8I6AEV5_RAT	ENSRNOG00000063148	Ig-like domain-containing protein	0	STLYLQMDSLR	STLYLQMDSLR	2	STLYLQMDSLR2	2.12229e+06	2.04899e+06	1.89377e+06
A0A8I6AEV5	F1LYU3;A0A8I6AM09;A0A8I6AEB7;A0A8I6AEV5;A0A8I6AKK2;A0A8I5Y662	A0A8I6AEV5_RAT	ENSRNOG00000063148	Ig-like domain-containing protein	0	STLYLQMDSLR	STLYLQMDSLR	3	STLYLQMDSLR3	5853.77	14478.2	13044.9
A0A8I6AP25	A0A8I6AH36;A0A8I6AP25	A0A8I6AP25_RAT	ENSRNOG00000065181	Ig-like domain-containing protein	0	STLYLQMNSLR	STLYLQMNSLR	2	STLYLQMNSLR2	1.18188e+06	1.09585e+06	1.13579e+06
A0A8I6AP25	A0A8I6AH36;A0A8I6AP25	A0A8I6AP25_RAT	ENSRNOG00000065181	Ig-like domain-containing protein	0	STLYLQMNSLR	STLYLQMNSLR	3	STLYLQMNSLR3	10811.2	9691.38	12685.8
M0RCL7	M0RCL7	M0RCL7_RAT	ENSRNOG00000069838	Ig-like domain-containing protein	1	STLYLQMSNVK	STLYLQMSNVK	2	STLYLQMSNVK2	136945	67892	71238.4
A0A8I6A583	A0A8I6A583;A0A8I6A8M8	A0A8I6A583_RAT	ENSRNOG00000064207	Ig-like domain-containing protein	0	STLYLQMSNVR	STLYLQMSNVR	2	STLYLQMSNVR2	74069.3	64522.1	67979.1
A0A8I6A583	A0A8I6A583;A0A8I6A8M8	A0A8I6A583_RAT	ENSRNOG00000064207	Ig-like domain-containing protein	0	STLYLQMSNVR	STLYLQMSNVR	3	STLYLQMSNVR3	3301.72		
P62628	P62628	DLRB1_RAT	Dynlrb1	Dynein light chain roadblock-type 1	1	STMDNPTTTQYANLMHNFILK	STMDNPTTTQYANLMHNFILK	3	STMDNPTTTQYANLMHNFILK3	114821	143128	90277.7
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	STMEGGVMK	STMEGGVMK	2	STMEGGVMK2	66553.4	65252.6	75546.6
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	STMEQCTSQK	STMEQC(UniMod:4)TSQK	2	STMEQC(UniMod:4)TSQK2			2771.24
A0A8I6A0R8	A0A8I6A0R8	A0A8I6A0R8_RAT	Srl	Sarcalumenin	1	STMINYLLGLEDTR	STMINYLLGLEDTR	2	STMINYLLGLEDTR2	3261.28	8656.14	12067.8
A0A8I6A0R8	A0A8I6A0R8	A0A8I6A0R8_RAT	Srl	Sarcalumenin	1	STMINYLLGLEDTR	STMINYLLGLEDTR	3	STMINYLLGLEDTR3	2036.8	1663.85	2479.41
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	STMKPVQK	STMKPVQK	1	STMKPVQK1			31288.1
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	STMKPVQK	STMKPVQK	2	STMKPVQK2			173804
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	STMLTYQSPTTGLFPTK	STMLTYQSPTTGLFPTK	2	STMLTYQSPTTGLFPTK2	12568.9	20938.1	15859.5
Q811U3	Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	1	STMTLGR	STMTLGR	2	STMTLGR2	23754.5	25095.8	27253.5
Q64303	Q64303;Q62829;P35465	PAK2_RAT	Pak2	Serine/threonine-protein kinase PAK 2	0	STMVGTPYWMAPEVVTR	STMVGTPYWMAPEVVTR	2	STMVGTPYWMAPEVVTR2	26715.7	29241.3	27924
Q64303	Q64303;Q62829;P35465	PAK2_RAT	Pak2	Serine/threonine-protein kinase PAK 2	0	STMVGTPYWMAPEVVTR	STMVGTPYWMAPEVVTR	3	STMVGTPYWMAPEVVTR3	2580.25	2633.29	1011.44
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	STNDSVLAVGFSPR	STNDSVLAVGFSPR	2	STNDSVLAVGFSPR2	12459.6	20738.9	16993.3
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	STNEAMEWMNSK	STNEAMEWMNSK	2	STNEAMEWMNSK2	183506	184517	179656
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	STNGDTFLGGEDFDQALLR	STNGDTFLGGEDFDQALLR	3	STNGDTFLGGEDFDQALLR3	3882.03	5008.71	4631.83
Q9Z1S7	Q9Z1S7	OMD_RAT	Omd	Osteomodulin	1	STNGETIQLK	STNGETIQLK	2	STNGETIQLK2	328471	334239	366511
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	STNLHDYGMLLPCGIDK	STNLHDYGMLLPC(UniMod:4)GIDK	2	STNLHDYGMLLPC(UniMod:4)GIDK2	13874	16449.9	18867.2
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	STNLHDYGMLLPCGIDK	STNLHDYGMLLPC(UniMod:4)GIDK	3	STNLHDYGMLLPC(UniMod:4)GIDK3	214423	222535	198281
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	STNLHDYGMLLPCGIDKFR	STNLHDYGMLLPC(UniMod:4)GIDKFR	4	STNLHDYGMLLPC(UniMod:4)GIDKFR4	9999.87	12846.8	10229.7
O54923	A0A0G2JYR1;O54923	EXOC6_RAT	Exoc6	Exocyst complex component 6	0	STNLLLTR	STNLLLTR	2	STNLLLTR2	28390.9	31374.7	24196.1
Q7TP42	Q7TP42	Q7TP42_RAT	Sec62	Translocation protein SEC62	1	STNMMGHR	STNMMGHR	2	STNMMGHR2	19245.2		22137.2
A0A8I6AIU4	A0A8I6AIU4	A0A8I6AIU4_RAT	ENSRNOG00000067551	Ig-like domain-containing protein	1	STNTAYMELSR	STNTAYMELSR	2	STNTAYMELSR2	103880	94148.3	112674
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	STNTLKK	STNTLKK	1	STNTLKK1			3984.79
O55012	O55012	PICAL_RAT	Picalm	Phosphatidylinositol-binding clathrin assembly protein	1	STNVAVDSGGGLLKPTVASQNQSLPVAK	STNVAVDSGGGLLKPTVASQNQSLPVAK	3	STNVAVDSGGGLLKPTVASQNQSLPVAK3	15739.7	12848.8	12732.8
A0A8I6GLJ8	A0A8I6GLJ8	A0A8I6GLJ8_RAT	ENSRNOG00000071091	Ig-like domain-containing protein	1	STNYATEYAESVK	STNYATEYAESVK	2	STNYATEYAESVK2	59009.7	58232.3	59372.7
A0A8I6GLJ8	A0A8I6GLJ8	A0A8I6GLJ8_RAT	ENSRNOG00000071091	Ig-like domain-containing protein	1	STNYATEYAESVK	STNYATEYAESVK	3	STNYATEYAESVK3	4074.51	5302.84	3630.47
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	STPAPVNQTDR	STPAPVNQTDR	2	STPAPVNQTDR2	28716	21631	26113.3
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	STPAPVNQTDREK	STPAPVNQTDREK	2	STPAPVNQTDREK2	5715.15	8388.67	5444.76
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	STPEDQILYQTER	STPEDQILYQTER	2	STPEDQILYQTER2	57022.9	61076.2	70396.4
Q68FS8	Q68FS8	Q68FS8_RAT	Rtca	RNA 3'-terminal-phosphate cyclase (ATP)	1	STPGLRPQHLSGLEMVR	STPGLRPQHLSGLEMVR	3	STPGLRPQHLSGLEMVR3	13633	18819	9020
Q68FS8	Q68FS8	Q68FS8_RAT	Rtca	RNA 3'-terminal-phosphate cyclase (ATP)	1	STPGLRPQHLSGLEMVR	STPGLRPQHLSGLEMVR	4	STPGLRPQHLSGLEMVR4	13395.3	12786.4	16428.1
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	STPLLSDR	STPLLSDR	2	STPLLSDR2	256625	271502	268185
D3ZLT7	D3ZLT7	D3ZLT7_RAT	Kiaa2013	Similar to RIKEN cDNA 2510039O18	1	STPLPSGLVHLVVVTSK	STPLPSGLVHLVVVTSK	3	STPLPSGLVHLVVVTSK3		10889.3	12738.4
P58200	P58200	VTI1B_RAT	Vti1b	Vesicle transport through interaction with t-SNAREs homolog 1B	1	STPLTATPGGR	STPLTATPGGR	2	STPLTATPGGR2	78671	87444.3	104376
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	STPSHGSVSSLNSTGSLSPK	STPSHGSVSSLNSTGSLSPK	3	STPSHGSVSSLNSTGSLSPK3	3276.73	3855.74	
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	STPTDLILCVPHLYSCLEDR	STPTDLILC(UniMod:4)VPHLYSC(UniMod:4)LEDR	3	STPTDLILC(UniMod:4)VPHLYSC(UniMod:4)LEDR3	49426.3	51408.7	46580.2
F1LUU1	F1LUU1	F1LUU1_RAT	Itga11	Integrin subunit alpha 11	1	STPTEEDLSHAPQR	STPTEEDLSHAPQR	3	STPTEEDLSHAPQR3	4274.82	2419.74	
B2RYU6	B2RYU6	TPC2L_RAT	Trappc2l	Trafficking protein particle complex subunit 2-like protein	1	STPTENELK	STPTENELK	2	STPTENELK2	118537	100101	99816.6
A0A8I6A4U0	P20767;A0A8I6A4U0;A0A8I5ZZL6	A0A8I6A4U0_RAT	ENSRNOG00000064589	Ig-like domain-containing protein	0	STPTLTVFPPSTEELQGNK	STPTLTVFPPSTEELQGNK	3	STPTLTVFPPSTEELQGNK3	872872	880286	1.00597e+06
F1LM66	F1LM66	F1LM66_RAT	Eftud2	116 kDa U5 small nuclear ribonucleoprotein component	1	STPVTVVLPDTK	STPVTVVLPDTK	2	STPVTVVLPDTK2	4386.86	6235.47	
Q498C8	Q498C8	RER1_RAT	Rer1	Protein RER1	1	STPYTAVR	STPYTAVR	2	STPYTAVR2	58045.6	49695.5	57547.4
Q561Q9	Q561Q9	Q561Q9_RAT	Ctsw	Cathepsin W	1	STPYWILK	STPYWILK	2	STPYWILK2	108790	87921.1	109577
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	STQAALDSAYR	STQAALDSAYR	2	STQAALDSAYR2	6798.01	8456.86	9360.5
Q03346	Q03346	MPPB_RAT	Pmpcb	Mitochondrial-processing peptidase subunit beta	1	STQAAPQVVLNVPETQVTCLENGLR	STQAAPQVVLNVPETQVTC(UniMod:4)LENGLR	3	STQAAPQVVLNVPETQVTC(UniMod:4)LENGLR3	7398.06	6625.79	6299.88
P98166	P98166	VLDLR_RAT	Vldlr	Very low-density lipoprotein receptor	1	STQCIPESWR	STQC(UniMod:4)IPESWR	2	STQC(UniMod:4)IPESWR2	16756.8	22948.7	24836.5
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	STQDTVVALDALSAYWIASHTTEEK	STQDTVVALDALSAYWIASHTTEEK	3	STQDTVVALDALSAYWIASHTTEEK3	2.25234e+06	2.42876e+06	2.47289e+06
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	STQDTVVALDALSAYWIASHTTEEK	STQDTVVALDALSAYWIASHTTEEK	4	STQDTVVALDALSAYWIASHTTEEK4	9895.39	5237.41	4096.41
P08649	P08649	CO4_RAT	C4	Complement C4	1	STQDTVVTLDALSAYWIASHTTEEK	STQDTVVTLDALSAYWIASHTTEEK	3	STQDTVVTLDALSAYWIASHTTEEK3	242573	321379	329409
P08649	P08649	CO4_RAT	C4	Complement C4	1	STQDTVVTLDALSAYWIASHTTEEK	STQDTVVTLDALSAYWIASHTTEEK	4	STQDTVVTLDALSAYWIASHTTEEK4	17127.5	14303	8645.88
P84817	P84817	FIS1_RAT	Fis1	Mitochondrial fission 1 protein	1	STQFEYAWCLVR	STQFEYAWC(UniMod:4)LVR	2	STQFEYAWC(UniMod:4)LVR2	43275.6	46819.6	49834.2
P30427	P30427	PLEC_RAT	Plec	Plectin	1	STQGAEEVLK	STQGAEEVLK	2	STQGAEEVLK2	4428.52	5609.85	
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	STQGVTLTDLK	STQGVTLTDLK	2	STQGVTLTDLK2	31597.3	31275	44467.1
Q10728	A0A8I6A6B6;Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	0	STQGVTLTDLQEAEK	STQGVTLTDLQEAEK	2	STQGVTLTDLQEAEK2	66349.2	52036.4	60451.6
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	STQIDQAIVK	STQIDQAIVK	2	STQIDQAIVK2	43581.4	46113.7	47660.2
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	STQLLELTTK	STQLLELTTK	2	STQLLELTTK2	53926.3	55256.3	48793.8
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	STQLLHAAAAEASLSK	STQLLHAAAAEASLSK	2	STQLLHAAAAEASLSK2	11236.6	14266.5	9056.84
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	STQLLHAAAAEASLSK	STQLLHAAAAEASLSK	3	STQLLHAAAAEASLSK3	62270.7	40118.2	46081.3
A0A0G2KB61	A0A0G2KB61	A0A0G2KB61_RAT	Ppp1r13b	Protein phosphatase 1, regulatory subunit 13B	1	STQMAGGDWK	STQMAGGDWK	2	STQMAGGDWK2	2371.22	3487.22	6008.93
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	STQPGVIASQVLDLR	STQPGVIASQVLDLR	2	STQPGVIASQVLDLR2	5656.78	13722.6	8602.8
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	STQVALEALSAMPTVR	STQVALEALSAMPTVR	2	STQVALEALSAMPTVR2	16526	43005.2	32379
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	STQVALEALSAMPTVR	STQVALEALSAMPTVR	3	STQVALEALSAMPTVR3	5832.61		15190.7
D3ZHW0	D3ZHW0	D3ZHW0_RAT	Dhx29	ATP-dependent RNA helicase DHX29	1	STQVPHFLLEDLLLNDCGAR	STQVPHFLLEDLLLNDC(UniMod:4)GAR	3	STQVPHFLLEDLLLNDC(UniMod:4)GAR3	8782.69	9467.18	6112.41
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	STRPNSLDIGKPPVR	STRPNSLDIGKPPVR	4	STRPNSLDIGKPPVR4	18352	43195.7	36336.6
P08649	P08649	CO4_RAT	C4	Complement C4	1	STRQRAACGQLNDFLQEYSSQGCQV	STRQRAAC(UniMod:4)GQLNDFLQEYSSQGC(UniMod:4)QV	3	STRQRAAC(UniMod:4)GQLNDFLQEYSSQGC(UniMod:4)QV3	8941.02	17695.5	11825.9
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	STSCAASLASQGER	STSC(UniMod:4)AASLASQGER	2	STSC(UniMod:4)AASLASQGER2	37945.5	51600.8	34208.8
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	STSEDCMAR	STSEDC(UniMod:4)MAR	2	STSEDC(UniMod:4)MAR2	292590	212091	184034
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	STSFGVPNANSIK	STSFGVPNANSIK	2	STSFGVPNANSIK2	127438	111931	114313
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	STSFNVQDLLPDR	STSFNVQDLLPDR	2	STSFNVQDLLPDR2	132917	130206	134531
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	STSFNVQDLLPDREYK	STSFNVQDLLPDREYK	2	STSFNVQDLLPDREYK2	5408.05	7346.38	5599.61
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	STSFNVQDLLPDREYK	STSFNVQDLLPDREYK	3	STSFNVQDLLPDREYK3	250845	289011	273185
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	STSFSEVPR	STSFSEVPR	2	STSFSEVPR2	47152.8	34533.9	43691.9
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	STSGLLYPPEAPELQIR	STSGLLYPPEAPELQIR	2	STSGLLYPPEAPELQIR2	44359.2	58775.7	52099
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	STSGLLYPPEAPELQIR	STSGLLYPPEAPELQIR	3	STSGLLYPPEAPELQIR3	16876.1	12382.3	11334.7
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	STSHDFDPTDSSSK	STSHDFDPTDSSSK	3	STSHDFDPTDSSSK3	3795.98	3771.13	4947.78
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	STSIDTGPTEAPSSLK	STSIDTGPTEAPSSLK	2	STSIDTGPTEAPSSLK2	12306.3	17794.7	15027.8
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	STSIDTGPTEAPSSLKR	STSIDTGPTEAPSSLKR	3	STSIDTGPTEAPSSLKR3	17652.3	16809.9	13364.7
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	STSILVMLTDGDANTGESR	STSILVMLTDGDANTGESR	3	STSILVMLTDGDANTGESR3	15210	7178.77	16023.6
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	STSILVMLTDGDANTGESRPEK	STSILVMLTDGDANTGESRPEK	3	STSILVMLTDGDANTGESRPEK3	137547	166458	166343
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	STSILVMLTDGDANTGESRPEK	STSILVMLTDGDANTGESRPEK	4	STSILVMLTDGDANTGESRPEK4	1.61236e+06	1.45233e+06	1.42326e+06
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	STSILVMLTDGDANTGESRPEKIQENVR	STSILVMLTDGDANTGESRPEKIQENVR	4	STSILVMLTDGDANTGESRPEKIQENVR4	25801.9	20924.2	24879.9
Q63598	Q63598	PLST_RAT	Pls3	Plastin-3	1	STSIQSFK	STSIQSFK	2	STSIQSFK2	18293.3	19040.2	23451.1
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	STSISSFK	STSISSFK	2	STSISSFK2	179450	147172	150802
P11661	P11661	NU5M_RAT	Mtnd5	NADH-ubiquinone oxidoreductase chain 5	1	STSITQTQLSK	STSITQTQLSK	2	STSITQTQLSK2	141947	122520	145350
P70483	P70483	STRN_RAT	Strn	Striatin	1	STSLDVEPIYTFR	STSLDVEPIYTFR	2	STSLDVEPIYTFR2	148539	149387	177206
P70483	P70483	STRN_RAT	Strn	Striatin	1	STSLDVEPIYTFR	STSLDVEPIYTFR	3	STSLDVEPIYTFR3	5290.05	15468.8	9915.11
Q9JMK8	Q9JMK8	VPS54_RAT	Vps54	Vacuolar protein sorting-associated protein 54	1	STSLLGALQSQANK	STSLLGALQSQANK	2	STSLLGALQSQANK2	5841.29		2535.6
Q5BK57	Q5BK57	HAUS8_RAT	Haus8	HAUS augmin-like complex subunit 8	1	STSLLRPDQK	STSLLRPDQK	2	STSLLRPDQK2	7185.77		
A0A8I5ZQH9	A0A8I5ZQH9	A0A8I5ZQH9_RAT	Dcaf6	DDB1 and CUL4 associated factor 6	1	STSLLSSPDSEPR	STSLLSSPDSEPR	2	STSLLSSPDSEPR2	5763.92	5013.1	3521.09
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	STSMLISSGHSK	STSMLISSGHSK	2	STSMLISSGHSK2	20874.7	16732.5	14772.5
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	STSMLISSGHSK	STSMLISSGHSK	3	STSMLISSGHSK3		13319.3	14000.8
Q63686	Q63686	CDK16_RAT	Cdk16	Cyclin-dependent kinase 16	1	STSMPDSGRPAFR	STSMPDSGRPAFR	3	STSMPDSGRPAFR3	19105	28742.6	19738.1
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	STSPEEIK	STSPEEIK	2	STSPEEIK2	28493.1	41367.1	33598.7
P0C5W1	P0C5W1	MAP1S_RAT	Map1s	Microtubule-associated protein 1S	1	STSPHDVDLCLVSPCEFSHR	STSPHDVDLC(UniMod:4)LVSPC(UniMod:4)EFSHR	4	STSPHDVDLC(UniMod:4)LVSPC(UniMod:4)EFSHR4	17659.1	19545.2	11582.3
B3GNI6	B3GNI6	SEP11_RAT	Septin11	Septin-11	1	STSQGFCFNILCVGETGIGK	STSQGFC(UniMod:4)FNILC(UniMod:4)VGETGIGK	3	STSQGFC(UniMod:4)FNILC(UniMod:4)VGETGIGK3	6001.78		12790.2
A0A8I5Y6A1	A0A8I5Y6A1	A0A8I5Y6A1_RAT	Ablim1	Actin-binding LIM protein 1	1	STSQGSINSPVYSR	STSQGSINSPVYSR	2	STSQGSINSPVYSR2	10293.5	6580.98	4128.02
A0A8I6AZI9	A0A8I6AZI9	A0A8I6AZI9_RAT	Ubash3a	Ubiquitin associated and SH3 domain containing, A	1	STSSLLDPLLALGFPTHTALK	STSSLLDPLLALGFPTHTALK	3	STSSLLDPLLALGFPTHTALK3	5742.14	5610.75	5436.5
P10716	P10716	CLC4F_RAT	Clec4f	C-type lectin domain family 4 member F	1	STSSLNSQIEVVNGK	STSSLNSQIEVVNGK	2	STSSLNSQIEVVNGK2	2145.57		
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	STSSPYHASNLLQR	STSSPYHASNLLQR	3	STSSPYHASNLLQR3	24581.4	19872.4	16285.8
D3ZC54	D3ZC54	D3ZC54_RAT	AABR07065823.2	Ig-like domain-containing protein	1	STSTAYMELSR	STSTAYMELSR	2	STSTAYMELSR2	97146	88719.3	72855.6
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	STSTLYSQFQTAESENR	STSTLYSQFQTAESENR	2	STSTLYSQFQTAESENR2	3006.9	1936.12	1137.06
D4A416	D4A416	D4A416_RAT	Clptm1l	CLPTM1-like	1	STTELPLTVSYDK	STTELPLTVSYDK	2	STTELPLTVSYDK2	14254.8	4543.04	11048.4
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	STTENFFLK	STTENFFLK	2	STTENFFLK2	54910.3	59503.4	49080.9
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	STTFAQAEVR	STTFAQAEVR	2	STTFAQAEVR2	13920.5	15892.1	10687.3
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	STTGAPSAAADSK	STTGAPSAAADSK	2	STTGAPSAAADSK2			9585.81
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	STTGCLNAR	STTGC(UniMod:4)LNAR	2	STTGC(UniMod:4)LNAR2	206588	181945	260747
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	STTGEIYLFCK	STTGEIYLFC(UniMod:4)K	2	STTGEIYLFC(UniMod:4)K2	19105.6	19068.8	27209.5
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	STTIYFYCDR	STTIYFYC(UniMod:4)DR	2	STTIYFYC(UniMod:4)DR2	25364.5	26384.2	28383.4
O35460	O35460	ANGP1_RAT	Angpt1	Angiopoietin-1	1	STTMMIR	STTMMIR	2	STTMMIR2	30269.3	25206.7	33699.9
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	STTPDITGYR	STTPDITGYR	2	STTPDITGYR2	4.71061e+07	5.50303e+07	51584.8
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	STTPEELYQR	STTPEELYQR	2	STTPEELYQR2	16591.2	10528.6	21690.3
A0A8I6G6W8	A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	1	STTPTSSPFR	STTPTSSPFR	2	STTPTSSPFR2	16996.9	14704.1	12037.2
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	STTPVIMVGPGTGIAPFMGFIQER	STTPVIMVGPGTGIAPFMGFIQER	3	STTPVIMVGPGTGIAPFMGFIQER3			5864.59
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	STTQVADSAYQR	STTQVADSAYQR	2	STTQVADSAYQR2	37052.9	40476.8	34996.8
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	STTQVHPVQK	STTQVHPVQK	2	STTQVHPVQK2			204030
Q5M929	Q5M929	RN135_RAT	Rnf135	E3 ubiquitin-protein ligase RNF135	1	STTQVVQELTELVGQLVDIVK	STTQVVQELTELVGQLVDIVK	3	STTQVVQELTELVGQLVDIVK3		4503.85	
A0A8I5ZWM5	A0A8I5ZWM5	A0A8I5ZWM5_RAT	ENSRNOG00000062828	Tr-type G domain-containing protein	1	STTTGHLLYK	STTTGHLLYK	2	STTTGHLLYK2	26058.4	27079	34547.6
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	STTTIGLVQALGAHLHQNVFACVR	STTTIGLVQALGAHLHQNVFAC(UniMod:4)VR	3	STTTIGLVQALGAHLHQNVFAC(UniMod:4)VR3			3925.41
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	STTTIGLVQALGAHLHQNVFACVR	STTTIGLVQALGAHLHQNVFAC(UniMod:4)VR	4	STTTIGLVQALGAHLHQNVFAC(UniMod:4)VR4	12801.6	15981	19140.9
A0A8I6G6W8	A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	STTTSDPPNICK	STTTSDPPNIC(UniMod:4)K	2	STTTSDPPNIC(UniMod:4)K2	13976	10092.6	10653.7
D4A447	D4A447	D4A447_RAT	Cd109	CD109 molecule	1	STTVLEAEGVFNR	STTVLEAEGVFNR	2	STTVLEAEGVFNR2	5565.9		
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	STVAALLQNLYQPTGGK	STVAALLQNLYQPTGGK	2	STVAALLQNLYQPTGGK2	53959.8	65694.9	43053.5
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	STVAALLQNLYQPTGGK	STVAALLQNLYQPTGGK	3	STVAALLQNLYQPTGGK3	25595.6	30351.9	26670.6
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	STVAQLVK	STVAQLVK	1	STVAQLVK1	15693.5	9610.62	7545.79
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	STVAQLVK	STVAQLVK	2	STVAQLVK2	1.07457e+06	960532	1.08179e+06
P11730	P08413;P15791;P11730	KCC2G_RAT	Camk2g	Calcium/calmodulin-dependent protein kinase type II subunit gamma	0	STVASMMHR	STVASMMHR	2	STVASMMHR2	16733.8	14016.4	11141.3
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	STVDAPAPAAGR	STVDAPAPAAGR	2	STVDAPAPAAGR2	101493	109604	94144.3
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	STVDAVQGGR	STVDAVQGGR	2	STVDAVQGGR2	14561.7	18165.4	25187.5
A0A0U1RRU5	A0A0U1RRU5	A0A0U1RRU5_RAT	Tab1	TGF-beta activated kinase 1/MAP3K7 binding protein 1	1	STVDGLQVTQLNVDHTAENEDELFR	STVDGLQVTQLNVDHTAENEDELFR	3	STVDGLQVTQLNVDHTAENEDELFR3	4418.25	5888.5	6412.48
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	STVEGIQASVK	STVEGIQASVK	2	STVEGIQASVK2	66087.5	77471.4	93169.3
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	STVEQHVELYQK	STVEQHVELYQK	2	STVEQHVELYQK2	35643.6	28207.4	40862.2
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	STVEQHVELYQK	STVEQHVELYQK	3	STVEQHVELYQK3	790102	809620	913874
P48450	P48450	LSS_RAT	Lss	Lanosterol synthase	1	STVFGTALSYVSLR	STVFGTALSYVSLR	2	STVFGTALSYVSLR2	2895.81	4976.75	1543.22
Q63481	Q63481	RAB7L_RAT	Rab29	Ras-related protein Rab-7L1	1	STVGVDFALK	STVGVDFALK	2	STVGVDFALK2	34858.2	20098.3	22317
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	STVINAMLWDK	STVINAMLWDK	2	STVINAMLWDK2	30979.1	33579.9	27611.8
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	STVISYECCPGYEK	STVISYEC(UniMod:4)C(UniMod:4)PGYEK	2	STVISYEC(UniMod:4)C(UniMod:4)PGYEK2	375216	365601	392172
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	STVISYECCPGYEK	STVISYEC(UniMod:4)C(UniMod:4)PGYEK	3	STVISYEC(UniMod:4)C(UniMod:4)PGYEK3	7591.73	10718.3	12231.6
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	STVISYECCPGYEKVPGEK	STVISYEC(UniMod:4)C(UniMod:4)PGYEKVPGEK	3	STVISYEC(UniMod:4)C(UniMod:4)PGYEKVPGEK3	16445.8	34982.5	37311.4
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	STVITAVK	STVITAVK	2	STVITAVK2	52065.9	47994.2	53058.4
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	STVLQQQYNR	STVLQQQYNR	2	STVLQQQYNR2	1.86113e+06	1.61876e+06	1.85191e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	STVLQQQYNR	STVLQQQYNR	3	STVLQQQYNR3	32027.3	35433.9	38628.9
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	STVLQSELESCK	STVLQSELESC(UniMod:4)K	2	STVLQSELESC(UniMod:4)K2	20995.4	30800.5	20821.8
O88656	Q99PD4;O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	0	STVLSLDWHPNNVLLAAGSCDFK	STVLSLDWHPNNVLLAAGSC(UniMod:4)DFK	3	STVLSLDWHPNNVLLAAGSC(UniMod:4)DFK3	71520.5	54947.5	67263.7
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	STVMASDVTK	STVMASDVTK	2	STVMASDVTK2	18143	6565.45	28479.1
A0A0G2JZH8	A0A0G2JZH8	A0A0G2JZH8_RAT	Pdhx	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	STVPHAYATANCDLGAVLK	STVPHAYATANC(UniMod:4)DLGAVLK	3	STVPHAYATANC(UniMod:4)DLGAVLK3	11333.7	10923	14976.6
Q5XIE4	Q5XIE4	Q5XIE4_RAT	Rchy1	Ring finger and CHY zinc finger domain containing 1	1	STVQFHILGMK	STVQFHILGMK	3	STVQFHILGMK3	1884.55		
Q62740	Q62740	SPP24_RAT	Spp2	Secreted phosphoprotein 24	1	STVQMSK	STVQMSK	1	STVQMSK1	43190.6	48101.9	44603.1
Q62740	Q62740	SPP24_RAT	Spp2	Secreted phosphoprotein 24	1	STVQMSK	STVQMSK	2	STVQMSK2	2.26284e+06	1.26e+06	1.02681e+06
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	STVSETFMSKPSIAK	STVSETFMSKPSIAK	3	STVSETFMSKPSIAK3		20865.2	6112.02
D3ZUV3	D3ZUV3	D3ZUV3_RAT	Eif2a	Eukaryotic translation initiation factor 2A	1	STVTQSASGDPEVDKK	STVTQSASGDPEVDKK	3	STVTQSASGDPEVDKK3	1161.55		2632.89
P23097	P23097	MMP13_RAT	Mmp13	Collagenase 3 (Fragment)	1	STVTSTVDR	STVTSTVDR	2	STVTSTVDR2	10984.7	25279.5	10531
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	STVTVNTIDLGSK	STVTVNTIDLGSK	2	STVTVNTIDLGSK2	30530.2	23466.1	23546.3
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	STVTVNTIDLGSKK	STVTVNTIDLGSKK	3	STVTVNTIDLGSKK3	5914.95	6414.74	9588.41
Q5FVL8	Q5FVL8	Q5FVL8_RAT	Abcb10	ATP binding cassette subfamily B member 10	1	STVVSLLLR	STVVSLLLR	2	STVVSLLLR2	11596	13232	9823.5
A0A8I5ZV31	A0A8I5ZV31	A0A8I5ZV31_RAT	Atp11c	Phospholipid-transporting ATPase	1	STVYIIENAK	STVYIIENAK	2	STVYIIENAK2	7738.51	8083.6	5847.1
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	STWEVIQESEDFK	STWEVIQESEDFK	2	STWEVIQESEDFK2	20990.7	18905.7	13140
D3ZQC1	D3ZQC1	D3ZQC1_RAT	B3galt6	Hexosyltransferase	1	STWLAQER	STWLAQER	2	STWLAQER2	20238.4	12884.7	11534.4
P00173	P00173	CYB5_RAT	Cyb5a	Cytochrome b5	1	STWVILHHK	STWVILHHK	2	STWVILHHK2	15956.9	3438.52	8674.45
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	STYDSEILSDATR	STYDSEILSDATR	2	STYDSEILSDATR2	13715.6	11587.9	6941.87
B2RYF6	B2RYF6	B2RYF6_RAT	Clptm1	CLPTM1 regulator of GABA type A receptor forward trafficking	1	STYIESSTK	STYIESSTK	2	STYIESSTK2	6689.29		8170.27
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	STYMFDLLLETR	STYMFDLLLETR	2	STYMFDLLLETR2	11306.7	9456.61	6120.35
A0A8I6A2J1	A0A8I6A2J1	A0A8I6A2J1_RAT	ENSRNOG00000064886	Ig-like domain-containing protein	1	STYMHWVNQRPGK	STYMHWVNQRPGK	3	STYMHWVNQRPGK3	17080	11144.5	9206.31
A0A8I6A2J1	A0A8I6A2J1	A0A8I6A2J1_RAT	ENSRNOG00000064886	Ig-like domain-containing protein	1	STYMHWVNQRPGK	STYMHWVNQRPGK	4	STYMHWVNQRPGK4	18248.8	11784.7	21602.9
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	STYNHLSSWLTDAR	STYNHLSSWLTDAR	2	STYNHLSSWLTDAR2	31334.7	21157.4	22407.1
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	STYNHLSSWLTDAR	STYNHLSSWLTDAR	3	STYNHLSSWLTDAR3	267602	249484	297531
A1L1K6	A1L1K6	A1L1K6_RAT	Gtf3c5	General transcription factor IIIC subunit 5	1	STYNYSLPITVK	STYNYSLPITVK	2	STYNYSLPITVK2	2552.05	2025.81	
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	STYVMEVR	STYVMEVR	2	STYVMEVR2	28732.4	30104.9	34709.3
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	SVAAFTADPLSLLR	SVAAFTADPLSLLR	2	SVAAFTADPLSLLR2	41671.6	61560.9	51027.9
O08618	O08618	KPRB_RAT	Prpsap2	Phosphoribosyl pyrophosphate synthase-associated protein 2	1	SVAAIHPSLEIPMLIPK	SVAAIHPSLEIPMLIPK	3	SVAAIHPSLEIPMLIPK3	15042.8	18351.6	19358.8
Q9EQH1	Q9EQH1	GAB2_RAT	Gab2	GRB2-associated-binding protein 2	1	SVAATIPR	SVAATIPR	2	SVAATIPR2	28973.9	25568.7	16823.7
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	SVADLITER	SVADLITER	2	SVADLITER2	294314	305662	294877
B5DEI0	B5DEI0	B5DEI0_RAT	Pcyox1l	Pcyox1l protein	1	SVAESLLQVGVTQR	SVAESLLQVGVTQR	2	SVAESLLQVGVTQR2	37593	33089.4	32397.4
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	SVAGADSPQSSPK	SVAGADSPQSSPK	2	SVAGADSPQSSPK2	12305.5	5920.61	4548.56
Q6AYS8	Q6AYS8	DHB11_RAT	Hsd17b11	Estradiol 17-beta-dehydrogenase 11	1	SVAGEIVLITGAGHGIGR	SVAGEIVLITGAGHGIGR	3	SVAGEIVLITGAGHGIGR3	3289.32		5527.83
E9PT66	E9PT66	E9PT66_RAT	Sf3b3	Splicing factor 3b, subunit 3	1	SVAGGFVYTYK	SVAGGFVYTYK	2	SVAGGFVYTYK2	9569.6	16477.3	11593.4
Q6AYJ8	Q6AYJ8	TP8L2_RAT	Tnfaip8l2	Tumor necrosis factor alpha-induced protein 8-like protein 2	1	SVAHLFIDETSSEVLDELYR	SVAHLFIDETSSEVLDELYR	3	SVAHLFIDETSSEVLDELYR3	8122.12	10342.8	7746.68
B2RYF6	B2RYF6	B2RYF6_RAT	Clptm1	CLPTM1 regulator of GABA type A receptor forward trafficking	1	SVAHLPWR	SVAHLPWR	2	SVAHLPWR2	3375.5	5472.98	
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	SVALGFDDTEVTTPMGTAEVAPDTSPR	SVALGFDDTEVTTPMGTAEVAPDTSPR	3	SVALGFDDTEVTTPMGTAEVAPDTSPR3	20556.3	26693.8	28847.7
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	SVAMCEMEK	SVAMC(UniMod:4)EMEK	2	SVAMC(UniMod:4)EMEK2	38605.7	39964	34270.7
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	SVAMQYLELTK	SVAMQYLELTK	2	SVAMQYLELTK2	23471	28340.5	20359.6
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	SVAPHAVASPAR	SVAPHAVASPAR	2	SVAPHAVASPAR2	148433	96137	122065
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	SVAPHAVASPAR	SVAPHAVASPAR	3	SVAPHAVASPAR3	649835	699278	749012
Q99PD6	Q99PD6	TGFI1_RAT	Tgfb1i1	Transforming growth factor beta-1-induced transcript 1 protein	1	SVAPVAPPFSSSSGVLGNGLCELDR	SVAPVAPPFSSSSGVLGNGLC(UniMod:4)ELDR	3	SVAPVAPPFSSSSGVLGNGLC(UniMod:4)ELDR3	71441.9	75434.5	88475.4
Q5BJM5	Q5BJM5	PKHO1_RAT	Plekho1	Pleckstrin homology domain-containing family O member 1	1	SVAQLAGSR	SVAQLAGSR	2	SVAQLAGSR2	22766.5	21677.5	23901.6
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	SVAQMDGPDPSK	SVAQMDGPDPSK	2	SVAQMDGPDPSK2	100909	62485.5	59877.8
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	SVAQMDGPDPSKIPSASAALPELK	SVAQMDGPDPSKIPSASAALPELK	3	SVAQMDGPDPSKIPSASAALPELK3	113361	141846	136166
A0A0G2K1D2	A0A0G2K1D2	A0A0G2K1D2_RAT	Rap1gds1	Rap1 GTPase-GDP dissociation stimulator 1	1	SVAQQASLTEQR	SVAQQASLTEQR	2	SVAQQASLTEQR2	8651.55	7044.2	12170.8
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	SVASDELHSMMQR	SVASDELHSMMQR	3	SVASDELHSMMQR3	47788.1	49540.8	41430
Q6IRK9	Q6IRK9	CBPQ_RAT	Cpq	Carboxypeptidase Q	1	SVASFSIYSPHTGHQGYQDGVPK	SVASFSIYSPHTGHQGYQDGVPK	3	SVASFSIYSPHTGHQGYQDGVPK3	26590.1	35603.9	39405.9
Q6IRK9	Q6IRK9	CBPQ_RAT	Cpq	Carboxypeptidase Q	1	SVASFSIYSPHTGHQGYQDGVPK	SVASFSIYSPHTGHQGYQDGVPK	4	SVASFSIYSPHTGHQGYQDGVPK4	22666.9	30144.8	38373
Q9QUR2	Q9QUR2	DCTN4_RAT	Dctn4	Dynactin subunit 4	1	SVASGGWQEPENPHAQR	SVASGGWQEPENPHAQR	2	SVASGGWQEPENPHAQR2	12031.7	3988.25	8026.01
Q9QUR2	Q9QUR2	DCTN4_RAT	Dctn4	Dynactin subunit 4	1	SVASGGWQEPENPHAQR	SVASGGWQEPENPHAQR	3	SVASGGWQEPENPHAQR3	95721.8	88941.5	91844.6
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	SVASIGGNIITASPISDLNPVFMASGAK	SVASIGGNIITASPISDLNPVFMASGAK	3	SVASIGGNIITASPISDLNPVFMASGAK3	52735.4	49185.5	46535.7
A0A8I6AAA9	A0A8I6AAA9;D4A456	A0A8I6AAA9_RAT	Lrch1	Leucine rich repeats and calponin homology domain containing 1	0	SVASIHVPSPAVPK	SVASIHVPSPAVPK	3	SVASIHVPSPAVPK3	28889.2	32948.9	11746.2
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	SVASLFDAFHAGFHK	SVASLFDAFHAGFHK	3	SVASLFDAFHAGFHK3	7585.93	10225.3	12242.6
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	SVASLFDAFHAGFHK	SVASLFDAFHAGFHK	4	SVASLFDAFHAGFHK4	3543.79		3208.09
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	SVATITPEELNCERPR	SVATITPEELNC(UniMod:4)ERPR	3	SVATITPEELNC(UniMod:4)ERPR3	162090	120489	148827
A0A8I6GBD2	A0A8I6GBD2	A0A8I6GBD2_RAT	Actr10	Actin related protein 10	1	SVATLILDSLLQCPVDTR	SVATLILDSLLQC(UniMod:4)PVDTR	3	SVATLILDSLLQC(UniMod:4)PVDTR3	10917.9		
A0A8I6GBD2	A0A8I6GBD2	A0A8I6GBD2_RAT	Actr10	Actin related protein 10	1	SVATLILDSLLQCPVDTRK	SVATLILDSLLQC(UniMod:4)PVDTRK	3	SVATLILDSLLQC(UniMod:4)PVDTRK3		2158.73	2977.08
A1EC81	A1EC81	A1EC81_RAT	Mmp28	Matrix metallopeptidase 28	1	SVATQLPGK	SVATQLPGK	2	SVATQLPGK2	7728.33	3688.8	11249
B1H232	B1H232	B1H232_RAT	Islr	Immunoglobulin superfamily containing leucine-rich repeat	1	SVAVGALAPLGHLK	SVAVGALAPLGHLK	3	SVAVGALAPLGHLK3	9382.25	4791.41	6656.71
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	SVAVYQADK	SVAVYQADK	2	SVAVYQADK2	12111.8	12719.9	11075
Q5M7T1	Q5M7T1	CIAO1_RAT	Ciao1	Probable cytosolic iron-sulfur protein assembly protein CIAO1	1	SVAWAPSGNLLATCSR	SVAWAPSGNLLATC(UniMod:4)SR	2	SVAWAPSGNLLATC(UniMod:4)SR2	135150	128827	149874
Q5M7T1	Q5M7T1	CIAO1_RAT	Ciao1	Probable cytosolic iron-sulfur protein assembly protein CIAO1	1	SVAWAPSGNLLATCSR	SVAWAPSGNLLATC(UniMod:4)SR	3	SVAWAPSGNLLATC(UniMod:4)SR3	4890.33	4119.1	4245.02
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	SVCAAAVGAPYR	SVC(UniMod:4)AAAVGAPYR	2	SVC(UniMod:4)AAAVGAPYR2	7779.46	6615.81	14057.4
B1WBR8	B1WBR8	B1WBR8_RAT	Fbxl4	F-box and leucine-rich repeat protein 4	1	SVCDTDIEELASNCTR	SVC(UniMod:4)DTDIEELASNC(UniMod:4)TR	2	SVC(UniMod:4)DTDIEELASNC(UniMod:4)TR2	1597.1	1713.77	
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	SVCGNQSNAYAR	SVC(UniMod:4)GNQSNAYAR	2	SVC(UniMod:4)GNQSNAYAR2	3561.56		2856.97
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	SVCTEAGMFAIR	SVC(UniMod:4)TEAGMFAIR	2	SVC(UniMod:4)TEAGMFAIR2	56419.4	68946.8	75622.8
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	SVCTEAGMFAIR	SVC(UniMod:4)TEAGMFAIR	3	SVC(UniMod:4)TEAGMFAIR3	8322.96	9017.52	6864.26
A0A8I5ZNY0	A0A8I5ZNY0	A0A8I5ZNY0_RAT	Avl9	AVL9 cell migration associated	1	SVCVLSK	SVC(UniMod:4)VLSK	2	SVC(UniMod:4)VLSK2	5371.15	5761.04	10778.7
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	SVDAILEESTEK	SVDAILEESTEK	2	SVDAILEESTEK2	51602.9	75203.8	61484.4
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	SVDCFLR	SVDC(UniMod:4)FLR	2	SVDC(UniMod:4)FLR2	89206.6	61921.3	75293.7
Q4V885	Q4V885	COL12_RAT	Colec12	Collectin-12	1	SVDDTSLAIQQIK	SVDDTSLAIQQIK	2	SVDDTSLAIQQIK2	8211.32	10040.1	7774.52
P35704	P35704	PRDX2_RAT	Prdx2	Peroxiredoxin-2	1	SVDEALR	SVDEALR	2	SVDEALR2	183404	256802	95394.5
Q9Z0V5	Q9Z0V5	PRDX4_RAT	Prdx4	Peroxiredoxin-4	1	SVDETLR	SVDETLR	2	SVDETLR2	230909	255383	229511
Q4KM73	Q4KM73	KCY_RAT	Cmpk1	UMP-CMP kinase	1	SVDEVFGDVMK	SVDEVFGDVMK	2	SVDEVFGDVMK2	64867.5	57404.8	54898.7
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	SVDGGLMVK	SVDGGLMVK	2	SVDGGLMVK2	10213.2	17170	
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	SVDGKEDSIQELLR	SVDGKEDSIQELLR	2	SVDGKEDSIQELLR2	7526.29	6787.48	4848.28
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	SVDGKEDSIQELLR	SVDGKEDSIQELLR	3	SVDGKEDSIQELLR3	29860.1	30728.5	34475.8
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	SVDGPIRLPIVDK	SVDGPIRLPIVDK	2	SVDGPIRLPIVDK2	15294	7491.54	6354.38
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	SVDGPIRLPIVDK	SVDGPIRLPIVDK	3	SVDGPIRLPIVDK3	257642	306734	321190
D3ZXY2	D3ZXY2	D3ZXY2_RAT	Pdzd8	PDZ domain containing 8	1	SVDHGEDVAAGK	SVDHGEDVAAGK	3	SVDHGEDVAAGK3			24580.7
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	SVDHSLPR	SVDHSLPR	2	SVDHSLPR2	7749.02	9660.34	11531.3
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	SVDIHDSAQPR	SVDIHDSAQPR	2	SVDIHDSAQPR2	3558.92	5155.3	
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	SVDIHDSAQPR	SVDIHDSAQPR	3	SVDIHDSAQPR3	127324	139900	111287
A0A8I5ZVX1	A0A8I6ANB2;A0A8I5ZVX1	A0A8I5ZVX1_RAT	Ppfibp2	PPFIA binding protein 2	0	SVDLAEYAPNLR	SVDLAEYAPNLR	2	SVDLAEYAPNLR2	17031.9	12300.2	7514.4
F1LRS8	F1LRS8	CD2AP_RAT	Cd2ap	CD2-associated protein	1	SVDLDALVAR	SVDLDALVAR	2	SVDLDALVAR2	3259.8	5926.66	4138.69
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	SVDLPGLK	SVDLPGLK	1	SVDLPGLK1	8740.49	8480.08	8475.96
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	SVDLPGLK	SVDLPGLK	2	SVDLPGLK2	1.14435e+06	1.35304e+06	1.10273e+06
Q9JI92	Q9JI92	SDCB1_RAT	Sdcbp	Syntenin-1	1	SVDNGIFVQLVQANSPASLVGLR	SVDNGIFVQLVQANSPASLVGLR	3	SVDNGIFVQLVQANSPASLVGLR3	24199.7	23474	35073.5
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	SVDNHVSPPVSAALQGIK	SVDNHVSPPVSAALQGIK	3	SVDNHVSPPVSAALQGIK3	9940.15	17096.1	13125.4
Q925S8	Q925S8	YMEL1_RAT	Yme1l1	ATP-dependent zinc metalloprotease YME1L1	1	SVDPEIIAR	SVDPEIIAR	2	SVDPEIIAR2	2316.01	4816.48	
Q920G2	Q920G2	NHRF2_RAT	Nherf2	Na(+)/H(+) exchange regulatory cofactor NHE-RF2	1	SVDPGSPASLSGLR	SVDPGSPASLSGLR	2	SVDPGSPASLSGLR2	5212	2933.87	
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	SVDPTLALSVYLR	SVDPTLALSVYLR	2	SVDPTLALSVYLR2	394435	399085	377519
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	SVDPTLALSVYLR	SVDPTLALSVYLR	3	SVDPTLALSVYLR3	30848.3	20209.1	28589.1
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	SVDSRPQPPEHPDHLTITR	SVDSRPQPPEHPDHLTITR	4	SVDSRPQPPEHPDHLTITR4	8874.4	10913.7	5140.23
B5DFL3	B5DFL3	B5DFL3_RAT	Itgb1bp1	Integrin subunit beta 1 binding protein 1	1	SVDSSLGGLSR	SVDSSLGGLSR	2	SVDSSLGGLSR2	19587.3	15003.5	16392.5
Q9Z136	Q9Z136	TSC1_RAT	Tsc1	Hamartin	1	SVDWTHFGGSPPSDEIR	SVDWTHFGGSPPSDEIR	3	SVDWTHFGGSPPSDEIR3	5965.07	6642.74	12823.3
P04550	P04550	PTMS_RAT	Ptms	Parathymosin	1	SVEAAAELSAK	SVEAAAELSAK	2	SVEAAAELSAK2	490314	482991	503919
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	SVEDAQDVSLALTQK	SVEDAQDVSLALTQK	2	SVEDAQDVSLALTQK2	2953.37	1675.14	
A0A8I6G6W8	A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	1	SVEDVRPHHVDTNSQSACFDVIDQK	SVEDVRPHHVDTNSQSAC(UniMod:4)FDVIDQK	4	SVEDVRPHHVDTNSQSAC(UniMod:4)FDVIDQK4	9053.65	12171.3	9043.02
A0A0G2JTM9	A0A0G2JTM9	A0A0G2JTM9_RAT	Dnajb14	DnaJ heat shock protein family (Hsp40) member B14	1	SVEEDYVTNIR	SVEEDYVTNIR	2	SVEEDYVTNIR2	13828.3	10507.3	7032.75
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	SVEEEER	SVEEEER	2	SVEEEER2			69399.5
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	SVEEIIPQASQR	SVEEIIPQASQR	2	SVEEIIPQASQR2	208444	228415	259768
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	SVEEIIPQASQR	SVEEIIPQASQR	3	SVEEIIPQASQR3	42859.6	38907.7	41484.4
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	SVEELLEVELLK	SVEELLEVELLK	2	SVEELLEVELLK2	3433.03	6329.06	5824.11
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	SVEELLEVELLK	SVEELLEVELLK	3	SVEELLEVELLK3	1707.46	1857.88	
A0A8I5Y868	A0A8I5Y868	A0A8I5Y868_RAT	Klc2	Kinesin light chain	1	SVEEPVQPGGTGLSDSR	SVEEPVQPGGTGLSDSR	2	SVEEPVQPGGTGLSDSR2	13106.8	7294.81	9461.5
Q4G012	Q4G012	FMC1_RAT	Fmc1	Protein FMC1 homolog	1	SVEESAGLVGLQLPHQPGGK	SVEESAGLVGLQLPHQPGGK	3	SVEESAGLVGLQLPHQPGGK3	3681.5	6077.72	
A0A0U1RRV5	A0A0U1RRV5	A0A0U1RRV5_RAT	Cluh	Clustered mitochondria protein homolog	1	SVEGLQEGSVLR	SVEGLQEGSVLR	2	SVEGLQEGSVLR2	7871.91	6229.54	8463.34
Q27W01	Q27W01	RBM8A_RAT	Rbm8a	RNA-binding protein 8A	1	SVEGWILFVTGVHEEATEEDIHDK	SVEGWILFVTGVHEEATEEDIHDK	4	SVEGWILFVTGVHEEATEEDIHDK4		5341.49	6028.79
A0A8I6AAD8	A0A8I6AAD8	A0A8I6AAD8_RAT	Snx4	Sorting nexin 4	1	SVEHADGQSVLTDSLWR	SVEHADGQSVLTDSLWR	3	SVEHADGQSVLTDSLWR3	14424.9	12755.9	15348.9
Q32Q06	D3ZRP6;Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	0	SVELEDVK	SVELEDVK	1	SVELEDVK1		2435.85	
Q32Q06	D3ZRP6;Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	0	SVELEDVK	SVELEDVK	2	SVELEDVK2	168996	203367	177485
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	SVELIIQGSSK	SVELIIQGSSK	2	SVELIIQGSSK2	99074.9	90764.4	76443.6
P86411	P86411	RGPA2_RAT	Ralgapa2	Ral GTPase-activating protein subunit alpha-2	1	SVELIPLTAR	SVELIPLTAR	2	SVELIPLTAR2	3826.11	6835.68	12375.4
Q5M9G9	Q5M9G9	FAKD4_RAT	Tbrg4	FAST kinase domain-containing protein 4	1	SVEQEVR	SVEQEVR	2	SVEQEVR2	36494.2	32972.4	39213.1
Q9EQG6	Q9EQG6	KDIS_RAT	Kidins220	Kinase D-interacting substrate of 220 kDa	1	SVESQVVPEDPR	SVESQVVPEDPR	2	SVESQVVPEDPR2	9894.35	6567.13	4997.42
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	SVESTCLCFAR	SVESTC(UniMod:4)LC(UniMod:4)FAR	2	SVESTC(UniMod:4)LC(UniMod:4)FAR2	5855.09	6663.19	5457.71
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	SVETDSSTVEHVR	SVETDSSTVEHVR	2	SVETDSSTVEHVR2	4218.78	3218.78	3527.7
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	SVETDSSTVEHVR	SVETDSSTVEHVR	3	SVETDSSTVEHVR3	79415.1	117548	102996
F1LP90	A0A0G2K490;A0A8I5ZLV4;F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	0	SVETGHLDGVFMHK	SVETGHLDGVFMHK	3	SVETGHLDGVFMHK3	115575	88500.6	117820
F1LP90	A0A0G2K490;A0A8I5ZLV4;F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	0	SVETGHLDGVFMHK	SVETGHLDGVFMHK	4	SVETGHLDGVFMHK4	122191	112039	145703
Q99P74	Q99P74	RB27B_RAT	Rab27b	Ras-related protein Rab-27B	1	SVETLLDLIMK	SVETLLDLIMK	2	SVETLLDLIMK2	8249.38		
Q99P74	Q99P74	RB27B_RAT	Rab27b	Ras-related protein Rab-27B	1	SVETLLDLIMK	SVETLLDLIMK	3	SVETLLDLIMK3	16061.9		
Q99P74	Q99P74	RB27B_RAT	Rab27b	Ras-related protein Rab-27B	1	SVETLLDLIMKR	SVETLLDLIMKR	3	SVETLLDLIMKR3	11898.6	8943.1	15931.8
Q04400	Q04400	ADCY5_RAT	Adcy5	Adenylate cyclase type 5	1	SVEVGLEER	SVEVGLEER	2	SVEVGLEER2	15009.5	18118.7	14873.4
Q6NX65	Q6NX65	PDC10_RAT	Pdcd10	Programmed cell death protein 10	1	SVEVNFTESLLR	SVEVNFTESLLR	2	SVEVNFTESLLR2	190408	176134	150593
Q6NX65	Q6NX65	PDC10_RAT	Pdcd10	Programmed cell death protein 10	1	SVEVNFTESLLR	SVEVNFTESLLR	3	SVEVNFTESLLR3	2919.63	2590.29	
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	SVEVSDPVPAGDAVK	SVEVSDPVPAGDAVK	2	SVEVSDPVPAGDAVK2	34769.3	26239.6	32274.9
Q9QZR8	Q9QZR8	PDZD2_RAT	Pdzd2	PDZ domain-containing protein 2	1	SVFALGAEGPK	SVFALGAEGPK	2	SVFALGAEGPK2		2664.68	3913.1
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	SVFDEDLQK	SVFDEDLQK	2	SVFDEDLQK2	11508.3	6435.97	8390.64
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	SVFECQGQVTR	SVFEC(UniMod:4)QGQVTR	2	SVFEC(UniMod:4)QGQVTR2	87415.6	90991.8	90970.5
B2GV15	B2GV15	B2GV15_RAT	Dbt	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	SVFEIAMELNR	SVFEIAMELNR	2	SVFEIAMELNR2	8430.55		11474.3
D3ZA85	D3ZA85	D3ZA85_RAT	Nfu1	NFU1 iron-sulfur cluster scaffold homolog, mitochondrial	1	SVFFGPDFITVTK	SVFFGPDFITVTK	2	SVFFGPDFITVTK2	10984.3	11133.2	7333.84
Q9Z2P6	Q9Z2P6	SNP29_RAT	Snap29	Synaptosomal-associated protein 29	1	SVFGGFINYFK	SVFGGFINYFK	2	SVFGGFINYFK2	101970	125892	152967
D3ZG57	D3ZG57	D3ZG57_RAT	Tor4a	Torsin family 4, member A	1	SVFGQPAAVSR	SVFGQPAAVSR	2	SVFGQPAAVSR2	87003.9	84169.6	88900.4
P25286	P25286	VPP1_RAT	Atp6v0a1	V-type proton ATPase 116 kDa subunit a 1	1	SVFIIFFQGDQLK	SVFIIFFQGDQLK	2	SVFIIFFQGDQLK2	28080.9	30354.2	26435.3
B0BNF8	B0BNF8	B0BNF8_RAT	Htatip2	HIV-1 Tat interactive protein 2	1	SVFILGASGETGK	SVFILGASGETGK	2	SVFILGASGETGK2	8975.83	5067.01	10148.5
Q9WTT7	Q9WTT7	5MP1_RAT	Bzw2	eIF5-mimic protein 1	1	SVFLDQMK	SVFLDQMK	2	SVFLDQMK2	54777.2	69529.4	48001.5
Q6P7P5	Q6P7P5	5MP2_RAT	Bzw1	eIF5-mimic protein 2	1	SVFLEQMK	SVFLEQMK	2	SVFLEQMK2	117324	113521	126292
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	SVFLTCR	SVFLTC(UniMod:4)R	2	SVFLTC(UniMod:4)R2	20011.8	20077.6	22288.9
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	SVFLTFLR	SVFLTFLR	2	SVFLTFLR2	44442.4	29563.8	43473.6
D4A415	D4A415	D4A415_RAT	Abraxas2	Abraxas 2, BRISC complex subunit	1	SVFMPRPQAVGSSNYASTSAGLK	SVFMPRPQAVGSSNYASTSAGLK	3	SVFMPRPQAVGSSNYASTSAGLK3	13910.8	20865.9	24641.5
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	SVFMSSTSASGTGR	SVFMSSTSASGTGR	2	SVFMSSTSASGTGR2	31363.4	32880.9	29765.8
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	SVFPEQANNNEWAR	SVFPEQANNNEWAR	2	SVFPEQANNNEWAR2	250168	300237	281704
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	SVFPEQANNNEWAR	SVFPEQANNNEWAR	3	SVFPEQANNNEWAR3	9404.51	11130.7	7990.74
D3ZZL3	D3ZZL3	D3ZZL3_RAT	Naglu	N-acetyl-alpha-glucosaminidase	1	SVFPLEQAFINNK	SVFPLEQAFINNK	2	SVFPLEQAFINNK2	11972.2	17762.7	11381.8
D3ZZL3	D3ZZL3	D3ZZL3_RAT	Naglu	N-acetyl-alpha-glucosaminidase	1	SVFPLEQAFINNKK	SVFPLEQAFINNKK	3	SVFPLEQAFINNKK3	2346.87		
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	SVFPLSVSDSPSR	SVFPLSVSDSPSR	2	SVFPLSVSDSPSR2	360995	257105	342960
Q4V8A2	Q4V8A2	CDC27_RAT	Cdc27	Cell division cycle protein 27 homolog	1	SVFSQSGNSR	SVFSQSGNSR	2	SVFSQSGNSR2	5035.49	4523.29	11614.6
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	SVFTEQQTGDALNEEQVIK	SVFTEQQTGDALNEEQVIK	3	SVFTEQQTGDALNEEQVIK3	20974.4	18296.5	24165.9
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	SVFVNWPHLEEAR	SVFVNWPHLEEAR	3	SVFVNWPHLEEAR3	11088.5	10255.2	13650.3
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	SVFVSFTTQAER	SVFVSFTTQAER	2	SVFVSFTTQAER2	11367.6	17458.3	6905.97
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	SVGAAAK	SVGAAAK	1	SVGAAAK1	1191.56	2678.4	
D3ZI07	D3ZI07;F1LQZ3	D3ZI07_RAT	Kif3b	Kinesin-like protein	0	SVGATNMNEHSSR	SVGATNMNEHSSR	2	SVGATNMNEHSSR2	7734.09		17574.5
D3ZI07	D3ZI07;F1LQZ3	D3ZI07_RAT	Kif3b	Kinesin-like protein	0	SVGATNMNEHSSR	SVGATNMNEHSSR	3	SVGATNMNEHSSR3			27595.8
D4A264	D4A264	D4A264_RAT	Ptgr3	Zinc binding alcohol dehydrogenase, domain containing 2	1	SVGCDRPINYR	SVGC(UniMod:4)DRPINYR	3	SVGC(UniMod:4)DRPINYR3	57402.6	57262.6	68317.7
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	SVGDERPATEPLFK	SVGDERPATEPLFK	2	SVGDERPATEPLFK2	3964.53	7511.72	
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	SVGDERPATEPLFK	SVGDERPATEPLFK	3	SVGDERPATEPLFK3	25529.1	51638.1	25978
Q62764	A0A8I5ZRA5;A0A8I6GL75;P62961;Q62764;D4A3P0	YBOX3_RAT	Ybx3	Y-box-binding protein 3	0	SVGDGETVEFDVVEGEK	SVGDGETVEFDVVEGEK	2	SVGDGETVEFDVVEGEK2	6544.66	10004	
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	SVGDIEQELER	SVGDIEQELER	2	SVGDIEQELER2	34454.6	52048.5	27932.3
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	SVGDLETLAFDGR	SVGDLETLAFDGR	2	SVGDLETLAFDGR2	2658.15	3467.41	5482.31
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	SVGDVALSQIVK	SVGDVALSQIVK	2	SVGDVALSQIVK2	27615.7	25966.4	27888.7
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	SVGEVMGIGR	SVGEVMGIGR	2	SVGEVMGIGR2	68628.9	69608.9	67769.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SVGFHLPSQEVQIPTFTIPK	SVGFHLPSQEVQIPTFTIPK	3	SVGFHLPSQEVQIPTFTIPK3	1.66131e+06	1.87101e+06	2.12145e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SVGFHLPSQEVQIPTFTIPK	SVGFHLPSQEVQIPTFTIPK	4	SVGFHLPSQEVQIPTFTIPK4	27417.3	16284.2	27223
D3ZZV1	D3ZZV1	D3ZZV1_RAT	Pam16	Presequence translocase associated motor 16	1	SVGGSFYLQSK	SVGGSFYLQSK	2	SVGGSFYLQSK2	15418.5	11446	20559.2
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	SVGGSGGGSFGDNLVTR	SVGGSGGGSFGDNLVTR	2	SVGGSGGGSFGDNLVTR2	3527.57	6011.44	5546.86
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	SVGKPALER	SVGKPALER	2	SVGKPALER2	8767.42	12048.9	6507.2
F7EVW7	F7EVW7	F7EVW7_RAT	Gpaa1	Glycosylphosphatidylinositol anchor attachment 1	1	SVGLEVYTQSFSR	SVGLEVYTQSFSR	2	SVGLEVYTQSFSR2			3273.92
Q499P3	Q499P3	C1GLC_RAT	C1galt1c1	C1GALT1-specific chaperone 1	1	SVGLFIK	SVGLFIK	2	SVGLFIK2	17786	15104.7	21390.8
P20070	P20070	NB5R3_RAT	Cyb5r3	NADH-cytochrome b5 reductase 3	1	SVGMIAGGTGITPMLQVIR	SVGMIAGGTGITPMLQVIR	2	SVGMIAGGTGITPMLQVIR2	21251.3	31023.6	25166.4
P20070	P20070	NB5R3_RAT	Cyb5r3	NADH-cytochrome b5 reductase 3	1	SVGMIAGGTGITPMLQVIR	SVGMIAGGTGITPMLQVIR	3	SVGMIAGGTGITPMLQVIR3	12458.4	21854.5	18832.6
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	SVGNAKPAETLKPVGNAK	SVGNAKPAETLKPVGNAK	3	SVGNAKPAETLKPVGNAK3	4406.52	3956.29	7892.46
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	SVGNAKPAETLKPVGNAK	SVGNAKPAETLKPVGNAK	4	SVGNAKPAETLKPVGNAK4	17244.9	29371.5	18430.9
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	SVGNPVEAR	SVGNPVEAR	2	SVGNPVEAR2	20834.2	13512.3	17594.4
P12368	P12368	KAP2_RAT	Prkar2a	cAMP-dependent protein kinase type II-alpha regulatory subunit	1	SVGQYDNR	SVGQYDNR	2	SVGQYDNR2	41053.4	29658.5	30940.8
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	SVGRDDREDITYTYK	SVGRDDREDITYTYK	3	SVGRDDREDITYTYK3	4893.96	3507.35	4346.73
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	SVGRDDREDITYTYK	SVGRDDREDITYTYK	4	SVGRDDREDITYTYK4	13947.4	16239.7	10241.4
Q9R0Z7	Q9R0Z7	AAGAB_RAT	Aagab	Alpha- and gamma-adaptin-binding protein p34	1	SVGSAESCQCEQEPSPTAER	SVGSAESC(UniMod:4)QC(UniMod:4)EQEPSPTAER	3	SVGSAESC(UniMod:4)QC(UniMod:4)EQEPSPTAER3	7517.15	13488.2	10925.6
P41243	P41243	MATK_RAT	Matk	Megakaryocyte-associated tyrosine-protein kinase	1	SVGVAAPAGGQEAEGSAPTR	SVGVAAPAGGQEAEGSAPTR	2	SVGVAAPAGGQEAEGSAPTR2	18430.2	24926.1	19779.7
P41243	P41243	MATK_RAT	Matk	Megakaryocyte-associated tyrosine-protein kinase	1	SVGVAAPAGGQEAEGSAPTR	SVGVAAPAGGQEAEGSAPTR	3	SVGVAAPAGGQEAEGSAPTR3	6041.27		8214.49
P97546	P97546	NPTN_RAT	Nptn	Neuroplastin	1	SVGYPHPEWMWR	SVGYPHPEWMWR	2	SVGYPHPEWMWR2	6676.96		8857.85
P97546	P97546	NPTN_RAT	Nptn	Neuroplastin	1	SVGYPHPEWMWR	SVGYPHPEWMWR	3	SVGYPHPEWMWR3	92877.9	91403.6	98988.2
P27605	P27605	HPRT_RAT	Hprt1	Hypoxanthine-guanine phosphoribosyltransferase	1	SVGYRPDFVGFEIPDK	SVGYRPDFVGFEIPDK	3	SVGYRPDFVGFEIPDK3	75595.4	68513.5	49280.2
A0A8I6G251	A0A8I6G251	A0A8I6G251_RAT	Tnpo3	Transportin 3	1	SVHAWEISDQLLQIR	SVHAWEISDQLLQIR	3	SVHAWEISDQLLQIR3	13939.5	18286.4	14577.6
P97521	P97521	MCAT_RAT	Slc25a20	Mitochondrial carnitine/acylcarnitine carrier protein	1	SVHDLSVPR	SVHDLSVPR	2	SVHDLSVPR2	66382.8	41644.8	33529.8
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	SVHELEK	SVHELEK	1	SVHELEK1	930730		586116
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	SVHELEK	SVHELEK	2	SVHELEK2	2.51105e+06	16902.2	18437.1
A0A0G2JV05	A0A0G2JV05	A0A0G2JV05_RAT	Mroh1	Maestro heat-like repeat family member 1	1	SVHFGEFLNSTCK	SVHFGEFLNSTC(UniMod:4)K	3	SVHFGEFLNSTC(UniMod:4)K3		1615.51	
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	SVHFYAECR	SVHFYAEC(UniMod:4)R	2	SVHFYAEC(UniMod:4)R2	3574.59	1816.92	
P43253	P43253	PI2R_RAT	Ptgir	Prostacyclin receptor	1	SVHGDLQTPLSR	SVHGDLQTPLSR	3	SVHGDLQTPLSR3	13453.5	10687.5	9919.65
P43253	P43253	PI2R_RAT	Ptgir	Prostacyclin receptor	1	SVHGDLQTPLSRPVSGR	SVHGDLQTPLSRPVSGR	4	SVHGDLQTPLSRPVSGR4	9286.6	13885.1	19288.6
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	SVHHALSEVQAEVSTK	SVHHALSEVQAEVSTK	2	SVHHALSEVQAEVSTK2	1078.78		1618.84
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	SVHHALSEVQAEVSTK	SVHHALSEVQAEVSTK	3	SVHHALSEVQAEVSTK3	37963.9	33558.3	32764.7
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	SVHPDILSSENR	SVHPDILSSENR	2	SVHPDILSSENR2	1578.87		
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	SVHPDILSSENR	SVHPDILSSENR	3	SVHPDILSSENR3	8536.03	6751.44	14340.6
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	SVHQLGSNLAISQAK	SVHQLGSNLAISQAK	2	SVHQLGSNLAISQAK2	5476.76	2552.67	2521.64
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	SVHQLGSNLAISQAK	SVHQLGSNLAISQAK	3	SVHQLGSNLAISQAK3	25398.7	31747.5	38738.3
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	SVHSLISDFKDPPTAK	SVHSLISDFKDPPTAK	2	SVHSLISDFKDPPTAK2	16091.5	7268.73	6435.67
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	SVHSLISDFKDPPTAK	SVHSLISDFKDPPTAK	3	SVHSLISDFKDPPTAK3	46761.8	41442.3	47311.8
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	SVHSLISDFKDPPTAK	SVHSLISDFKDPPTAK	4	SVHSLISDFKDPPTAK4	33063.7	31133	35037.1
D3ZII8	D3ZII8	D3ZII8_RAT	Smyd5	Histone-lysine N-trimethyltransferase SMYD5	1	SVHYPPETASIMLMAR	SVHYPPETASIMLMAR	2	SVHYPPETASIMLMAR2	17270.2	11387.5	6284.39
D3ZII8	D3ZII8	D3ZII8_RAT	Smyd5	Histone-lysine N-trimethyltransferase SMYD5	1	SVHYPPETASIMLMAR	SVHYPPETASIMLMAR	3	SVHYPPETASIMLMAR3	22070.5	21095.3	18007
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	SVIDLRPEDVAQESGILGDR	SVIDLRPEDVAQESGILGDR	3	SVIDLRPEDVAQESGILGDR3	679944	716404	683815
Q64303	Q64303	PAK2_RAT	Pak2	Serine/threonine-protein kinase PAK 2	1	SVIDPIPAPVGDSNVDSGAK	SVIDPIPAPVGDSNVDSGAK	2	SVIDPIPAPVGDSNVDSGAK2	32170.8	34174.1	46710.4
P70483	P70483	STRN_RAT	Strn	Striatin	1	SVIDTSTIVR	SVIDTSTIVR	2	SVIDTSTIVR2	274569	225219	298451
D3ZTX0	D3ZTX0	TMED7_RAT	Tmed7	Transmembrane emp24 domain-containing protein 7	1	SVIDYQTHFR	SVIDYQTHFR	2	SVIDYQTHFR2	103117	60752.1	73388.4
D3ZTX0	D3ZTX0	TMED7_RAT	Tmed7	Transmembrane emp24 domain-containing protein 7	1	SVIDYQTHFR	SVIDYQTHFR	3	SVIDYQTHFR3	497727	465269	481786
O08949	O08949	TF2AA_RAT	Gtf2a1	Transcription initiation factor IIA subunit 1	1	SVIEDVINDVR	SVIEDVINDVR	2	SVIEDVINDVR2	7211.12	6283.56	3256.03
Q68FX0	Q68FX0	IDH3B_RAT	Idh3B	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	SVIGHLHPHGG	SVIGHLHPHGG	2	SVIGHLHPHGG2	6023.69	8050.91	4375.44
P70541	P70541	EI2BG_RAT	Eif2b3	Translation initiation factor eIF-2B subunit gamma	1	SVIGSSCVIR	SVIGSSC(UniMod:4)VIR	2	SVIGSSC(UniMod:4)VIR2	53130.3	47858.9	55120.1
Q7TPK6	Q9JIH7;Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	0	SVIGTPEFMAPEMYEEK	SVIGTPEFMAPEMYEEK	2	SVIGTPEFMAPEMYEEK2	33978.9	32167.1	24192.1
Q7TPK6	Q9JIH7;Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	0	SVIGTPEFMAPEMYEEK	SVIGTPEFMAPEMYEEK	3	SVIGTPEFMAPEMYEEK3	8816.11	8273.39	10576.8
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	SVIHKPFTQSR	SVIHKPFTQSR	3	SVIHKPFTQSR3	16628.9	18667.7	11824.9
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	SVIHVLPDEVEHCQSILFSMLPR	SVIHVLPDEVEHC(UniMod:4)QSILFSMLPR	3	SVIHVLPDEVEHC(UniMod:4)QSILFSMLPR3	4624.3	6241.51	7020.27
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	SVIHVLPDEVEHCQSILFSMLPR	SVIHVLPDEVEHC(UniMod:4)QSILFSMLPR	4	SVIHVLPDEVEHC(UniMod:4)QSILFSMLPR4	13242.2	15898.4	7418.63
D3ZEJ9	D3ZEJ9	D3ZEJ9_RAT	RGD1310429	Similar to Protein Njmu-R1	1	SVIIDCSGPQPQFHNAGSNR	SVIIDC(UniMod:4)SGPQPQFHNAGSNR	3	SVIIDC(UniMod:4)SGPQPQFHNAGSNR3	30905.6	41136.9	27589.7
Q8K4C0	Q8K4C0	FMO5_RAT	Fmo5	Flavin-containing monooxygenase 5	1	SVIINTSK	SVIINTSK	2	SVIINTSK2		12261.3	13926.4
P0DSP1	P0DSP1	SORL_RAT	Sorl1	Sortilin-related receptor	1	SVILDNLPHPYAIAVFK	SVILDNLPHPYAIAVFK	3	SVILDNLPHPYAIAVFK3	6791.95		5220.52
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	SVILEAFSSPSEEVK	SVILEAFSSPSEEVK	2	SVILEAFSSPSEEVK2	246738	313611	263275
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	SVILEAFSSPSEEVK	SVILEAFSSPSEEVK	3	SVILEAFSSPSEEVK3	25066.1	20113.3	27094.6
D3ZP29	D3ZP29	D3ZP29_RAT	Icam4	Intercellular adhesion molecule 4, Landsteiner-Wiener blood group	1	SVILEPPVLVGHK	SVILEPPVLVGHK	3	SVILEPPVLVGHK3	2882.37	8085.73	
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	SVILHLLSQLK	SVILHLLSQLK	2	SVILHLLSQLK2	4423.16	3157.36	6731.78
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	SVILHLLSQLK	SVILHLLSQLK	3	SVILHLLSQLK3	29824.3	20592.9	13708.6
F1LRE5	F1LRE5	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	1	SVIMHLLSQVR	SVIMHLLSQVR	2	SVIMHLLSQVR2	3884.35	5215.21	5590.36
F1LRE5	F1LRE5	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	1	SVIMHLLSQVR	SVIMHLLSQVR	3	SVIMHLLSQVR3	19043	24530.3	18711.8
D4A5Z0	A0A8I6AML2;D4A5Z0	D4A5Z0_RAT	Csgalnact2	Hexosyltransferase	0	SVINIIVPLAER	SVINIIVPLAER	2	SVINIIVPLAER2	1299.2	2347.01	1304.83
P13264	P13264	GLSK_RAT	Gls	Glutaminase kidney isoform, mitochondrial	1	SVINLLFAAYTGDVSALRR	SVINLLFAAYTGDVSALRR	3	SVINLLFAAYTGDVSALRR3		3258.9	3280.16
Q6RJR6	Q6RJR6	RTN3_RAT	Rtn3	Reticulon-3	1	SVIQAVQK	SVIQAVQK	1	SVIQAVQK1	5825.62	1664.79	2973.02
Q6RJR6	Q6RJR6	RTN3_RAT	Rtn3	Reticulon-3	1	SVIQAVQK	SVIQAVQK	2	SVIQAVQK2	644406	640961	670177
A0A0G2K618	A0A0G2K618	A0A0G2K618_RAT	Large1	LARGE xylosyl- and glucuronyltransferase 1	1	SVIQLDLANTK	SVIQLDLANTK	2	SVIQLDLANTK2	3604.43	3027.7	3324.01
A0A8I6A9E8	A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	1	SVIRPATQQAQK	SVIRPATQQAQK	3	SVIRPATQQAQK3	2218.99		2357.15
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	SVISGGLDALEFIGK	SVISGGLDALEFIGK	2	SVISGGLDALEFIGK2	29404.5	23074.6	40198.8
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	SVISGGLDALEFIGKK	SVISGGLDALEFIGKK	3	SVISGGLDALEFIGKK3	20827.5	39349	33323.3
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	SVITSIFGVK	SVITSIFGVK	2	SVITSIFGVK2	78120.6	79531.3	88454
A0A8I5ZQD4	A0A8I5ZQD4	A0A8I5ZQD4_RAT	Dst	Dystonin	1	SVITYVSSLYDAFPK	SVITYVSSLYDAFPK	2	SVITYVSSLYDAFPK2	32835.3	24233.4	28407
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	SVIVPLLHAFK	SVIVPLLHAFK	3	SVIVPLLHAFK3	8753.13	9099.92	8649.6
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	SVKPDDLGSLR	SVKPDDLGSLR	2	SVKPDDLGSLR2	31671.6	25163.4	35958.5
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	SVKPDDLGSLR	SVKPDDLGSLR	3	SVKPDDLGSLR3	737898	784866	910233
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	SVKPLALFDSK	SVKPLALFDSK	3	SVKPLALFDSK3	26455.4	29893.8	24921.9
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	SVLAAEAVR	SVLAAEAVR	2	SVLAAEAVR2	14358.6	12001.2	14150.7
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	SVLAETEGILQK	SVLAETEGILQK	2	SVLAETEGILQK2	12434.1	8215.54	12541.8
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	SVLAETEGILQK	SVLAETEGILQK	3	SVLAETEGILQK3	2196.16	1348.25	1814.57
A0A096MJF9	A0A096MJF9	A0A096MJF9_RAT	Tmem132e	Transmembrane protein 132E	1	SVLATTPVGLR	SVLATTPVGLR	2	SVLATTPVGLR2	15570.6	22902.3	21901.7
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	SVLAVENLLTLDR	SVLAVENLLTLDR	2	SVLAVENLLTLDR2	27922.6	28635.3	12414.8
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	SVLDAAQIVGLNCLR	SVLDAAQIVGLNC(UniMod:4)LR	2	SVLDAAQIVGLNC(UniMod:4)LR2	18312	17644.3	15583.2
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	SVLDAAQIVGLNCLR	SVLDAAQIVGLNC(UniMod:4)LR	3	SVLDAAQIVGLNC(UniMod:4)LR3	5582.73	3613.11	5920.88
F1LWZ3	F1LWZ3	F1LWZ3_RAT	Rhbdf2	Inactive rhomboid protein	1	SVLDATGQR	SVLDATGQR	2	SVLDATGQR2	16884.7	20377.3	27487
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	SVLEAIR	SVLEAIR	2	SVLEAIR2	295993	329557	298218
A2RUW1	A2RUW1	TOLIP_RAT	Tollip	Toll-interacting protein	1	SVLEAQR	SVLEAQR	2	SVLEAQR2	99293	110623	99906.2
B5DFI3	B5DFI3	B5DFI3_RAT	Ap1s1	AP complex subunit sigma	1	SVLEEMGLA	SVLEEMGLA	1	SVLEEMGLA1	16399.3	13737.7	19291.6
B5DFI3	B5DFI3	B5DFI3_RAT	Ap1s1	AP complex subunit sigma	1	SVLEEMGLA	SVLEEMGLA	2	SVLEEMGLA2	6280.25	7301.53	4591.67
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	SVLEVAHYK	SVLEVAHYK	2	SVLEVAHYK2	254940	239872	218480
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	SVLFHTVR	SVLFHTVR	2	SVLFHTVR2	7093.41	3051.68	2226.48
Q66H09	Q66H09	Q66H09_RAT	Ttc1	Tetratricopeptide repeat domain 1	1	SVLFSNR	SVLFSNR	2	SVLFSNR2	85087	94318.6	96822.8
P41498	P41498	PPAC_RAT	Acp1	Low molecular weight phosphotyrosine protein phosphatase	1	SVLFVCLGNICR	SVLFVC(UniMod:4)LGNIC(UniMod:4)R	2	SVLFVC(UniMod:4)LGNIC(UniMod:4)R2	6972.61	7639.11	6124.56
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	SVLGDADQK	SVLGDADQK	2	SVLGDADQK2	40775.8	31130	34936
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	SVLGGDCLLK	SVLGGDC(UniMod:4)LLK	2	SVLGGDC(UniMod:4)LLK2	141464	119327	146890
F1M9Q3	F1M9Q3	F1M9Q3_RAT	Ltn1	E3 ubiquitin-protein ligase listerin	1	SVLGVSNLVGILQKPESSLK	SVLGVSNLVGILQKPESSLK	3	SVLGVSNLVGILQKPESSLK3	31485.7	13561.4	14910.6
P08081	P08081	CLCA_RAT	Clta	Clathrin light chain A	1	SVLISLK	SVLISLK	1	SVLISLK1	9141.35	6951.44	7897.39
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	SVLLLAYKPMEGNFEEIAR	SVLLLAYKPMEGNFEEIAR	3	SVLLLAYKPMEGNFEEIAR3	45325.6	58294.3	34226.8
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	SVLLQER	SVLLQER	2	SVLLQER2	96470.2	82715.6	71396.8
P08082	P08082	CLCB_RAT	Cltb	Clathrin light chain B	1	SVLMSLK	SVLMSLK	2	SVLMSLK2	47675.4	50762.5	54543.4
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	SVLNCIYK	SVLNC(UniMod:4)IYK	2	SVLNC(UniMod:4)IYK2	14596.7	17648.3	11340.7
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	SVLPEGPVGHSGK	SVLPEGPVGHSGK	3	SVLPEGPVGHSGK3	16592.7	11609	17415.4
B5DF57	B5DF57	B5DF57_RAT	Epb42	protein-glutamine gamma-glutamyltransferase	1	SVLPISQTQAAQQGALLYK	SVLPISQTQAAQQGALLYK	3	SVLPISQTQAAQQGALLYK3	3474.52	4563.83	1606.42
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	SVLQEDAEK	SVLQEDAEK	2	SVLQEDAEK2	35871.6	38352.3	36464.2
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	SVLQPSQQK	SVLQPSQQK	2	SVLQPSQQK2	520202	585687	536138
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	SVLQYNSAMK	SVLQYNSAMK	2	SVLQYNSAMK2	41123.7	38283.3	48116.5
A0A0G2K012	A0A0G2K012	A0A0G2K012_RAT	Ubxn6	UBX domain protein 6	1	SVLRPELLAAIEQLS	SVLRPELLAAIEQLS	2	SVLRPELLAAIEQLS2		5331.01	3500.98
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	SVLRPSQFGGQPCTEPLVTFQPCVPSELCK	SVLRPSQFGGQPC(UniMod:4)TEPLVTFQPC(UniMod:4)VPSELC(UniMod:4)K	4	SVLRPSQFGGQPC(UniMod:4)TEPLVTFQPC(UniMod:4)VPSELC(UniMod:4)K4	48177	48131.4	43812.4
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	SVLSDQLGCEFFK	SVLSDQLGC(UniMod:4)EFFK	2	SVLSDQLGC(UniMod:4)EFFK2	116062	104935	132512
Q5M7T1	Q5M7T1	CIAO1_RAT	Ciao1	Probable cytosolic iron-sulfur protein assembly protein CIAO1	1	SVLSEGHQR	SVLSEGHQR	2	SVLSEGHQR2	98230.3	92576.5	90982.8
Q5FVF9	Q5FVF9	BTD_RAT	Btd	Biotinidase	1	SVLSPNPLELSSR	SVLSPNPLELSSR	2	SVLSPNPLELSSR2	287884	209150	222220
Q6AXY8	Q6AXY8	Q6AXY8_RAT	Dhrs1	Dehydrogenase/reductase 1	1	SVLSSAETTEMSGK	SVLSSAETTEMSGK	2	SVLSSAETTEMSGK2	8689.16	3269.23	
P58751	P58751	RELN_RAT	Reln	Reelin	1	SVLSTCR	SVLSTC(UniMod:4)R	2	SVLSTC(UniMod:4)R2	436345	485234	442751
O88959	O88959	INHBE_RAT	Inhbe	Inhibin beta E chain	1	SVLTFQLSPLWSHHLYHAR	SVLTFQLSPLWSHHLYHAR	4	SVLTFQLSPLWSHHLYHAR4	3782.53		
A0A8I5ZXD6	A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	1	SVLTGGLDALEFIGK	SVLTGGLDALEFIGK	2	SVLTGGLDALEFIGK2	15414.3	13187.4	5520.13
A0A8I5ZXD6	A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	1	SVLTGGLDALEFIGK	SVLTGGLDALEFIGK	3	SVLTGGLDALEFIGK3	1311.12	1701.71	2973.73
A0A8I5ZXD6	A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	1	SVLTGGLDALEFIGKK	SVLTGGLDALEFIGKK	3	SVLTGGLDALEFIGKK3	56341.3	49676	53031.2
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	SVLTLANAGR	SVLTLANAGR	2	SVLTLANAGR2	8018.82	2421.12	3742.5
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	SVLTMDPVSFENEHSYLCTATCNSGK	SVLTMDPVSFENEHSYLC(UniMod:4)TATC(UniMod:4)NSGK	4	SVLTMDPVSFENEHSYLC(UniMod:4)TATC(UniMod:4)NSGK4	7966.73		10978.3
Q6AYK3	Q6AYK3	INO1_RAT	Isyna1	Inositol-3-phosphate synthase 1	1	SVLVDFLIGSGLK	SVLVDFLIGSGLK	2	SVLVDFLIGSGLK2	6021.92		4223.78
Q8VHK0	Q8VHK0	ACOT8_RAT	Acot8	Acyl-coenzyme A thioesterase 8	1	SVLVTSVLNLEPLDEDLYR	SVLVTSVLNLEPLDEDLYR	3	SVLVTSVLNLEPLDEDLYR3	2317.07	4091.67	
D4ADM2	D4ADM2	D4ADM2_RAT	Pan3	PAN2-PAN3 deadenylation complex subunit PAN3	1	SVLVVTYSDLKR	SVLVVTYSDLKR	3	SVLVVTYSDLKR3	5501.05	6649.3	5799.54
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	SVMDATQIAGLNCLR	SVMDATQIAGLNC(UniMod:4)LR	2	SVMDATQIAGLNC(UniMod:4)LR2	600104	647250	586751
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	SVMDATQIAGLNCLR	SVMDATQIAGLNC(UniMod:4)LR	3	SVMDATQIAGLNC(UniMod:4)LR3	53653	64381.1	61268.7
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	SVMEAPFPAPGR	SVMEAPFPAPGR	2	SVMEAPFPAPGR2	92943.7	99654.6	70509
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	SVMIDEDMTAR	SVMIDEDMTAR	2	SVMIDEDMTAR2	397619	468678	521032
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	SVMLMLGR	SVMLMLGR	2	SVMLMLGR2	87032.9	85179.4	88339
B2RZ66	B2RZ66	B2RZ66_RAT	Srp19	Signal recognition particle 19 kDa protein	1	SVMLYVAEMIPK	SVMLYVAEMIPK	2	SVMLYVAEMIPK2	6570.35	2173.19	
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	SVMSDQCAGQWFLR	SVMSDQC(UniMod:4)AGQWFLR	2	SVMSDQC(UniMod:4)AGQWFLR2	25710.5	21198	22463.5
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SVMSFAGNSDASTIK	SVMSFAGNSDASTIK	2	SVMSFAGNSDASTIK2	162725	231784	131733
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SVMSFAGNSDASTIK	SVMSFAGNSDASTIK	3	SVMSFAGNSDASTIK3	159451	229695	181223
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SVMSFAGNSDASTIKENR	SVMSFAGNSDASTIKENR	2	SVMSFAGNSDASTIKENR2	26105.5	48016.2	44307.3
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SVMSFAGNSDASTIKENR	SVMSFAGNSDASTIKENR	3	SVMSFAGNSDASTIKENR3	1.27361e+06	1.91943e+06	1.84079e+06
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SVMSFAGNSDASTIKENRFDPPIVAR	SVMSFAGNSDASTIKENRFDPPIVAR	3	SVMSFAGNSDASTIKENRFDPPIVAR3	28058.2	52601.9	33463.8
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SVMSFAGNSDASTIKENRFDPPIVAR	SVMSFAGNSDASTIKENRFDPPIVAR	4	SVMSFAGNSDASTIKENRFDPPIVAR4	124029	226163	256565
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	SVMSGDQLKEDR	SVMSGDQLKEDR	2	SVMSGDQLKEDR2	11001.3	5806.11	4623.01
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	SVMSGDQLKEDR	SVMSGDQLKEDR	3	SVMSGDQLKEDR3	82457.6	109273	109177
Q9WVC0	Q9WVC0	SEPT7_RAT	Septin7	Septin-7	1	SVNCSTMAQPK	SVNC(UniMod:4)STMAQPK	2	SVNC(UniMod:4)STMAQPK2	2024.16		2847.82
P05426	A0A8I5ZP24;P05426;F1LUE9;A0A8I6AL81	RL7_RAT	Rpl7	Large ribosomal subunit protein uL30	0	SVNELIYK	SVNELIYK	2	SVNELIYK2	50472.2	53019.5	49396
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	SVNESLNNLFITEEDYQALR	SVNESLNNLFITEEDYQALR	3	SVNESLNNLFITEEDYQALR3	140206	99189.2	136971
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	SVNEVMEWMNNVMNAQAK	SVNEVMEWMNNVMNAQAK	3	SVNEVMEWMNNVMNAQAK3	16220.5	16151.4	11281.3
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	SVNFDMTSK	SVNFDMTSK	2	SVNFDMTSK2	66588.6	70139	70303.5
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	SVNFSLTPNEIK	SVNFSLTPNEIK	2	SVNFSLTPNEIK2	22322.4	26934.8	17584.7
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	SVNISENR	SVNISENR	2	SVNISENR2	83450.6	67621.9	83697
A0A8I6AHW7	A0A8I6AHW7	A0A8I6AHW7_RAT	Smap1	Small ArfGAP 1	1	SVNLDQWTPEQIQCMQDMGNTK	SVNLDQWTPEQIQC(UniMod:4)MQDMGNTK	3	SVNLDQWTPEQIQC(UniMod:4)MQDMGNTK3	10498.8	11353.8	5411.88
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	SVNLLVVK	SVNLLVVK	2	SVNLLVVK2	74646.6	47161.7	45890.5
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	SVNLMEQNSNNSALPYK	SVNLMEQNSNNSALPYK	2	SVNLMEQNSNNSALPYK2	10213.2	11672.6	11906.1
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	SVNLMEQNSNNSALPYKK	SVNLMEQNSNNSALPYKK	3	SVNLMEQNSNNSALPYKK3	15349.2	15621.9	14356.8
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	SVNPDILSLENR	SVNPDILSLENR	2	SVNPDILSLENR2	7123.79	9143.78	9470.77
P19132	A0A8I5ZU81;P19132	FRIH_RAT	Fth1	Ferritin heavy chain	0	SVNQSLLELHK	SVNQSLLELHK	3	SVNQSLLELHK3	20469.4	19921.1	22071.1
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	SVPAASGGDKEAVAR	SVPAASGGDKEAVAR	2	SVPAASGGDKEAVAR2	4235.61		
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	SVPAASGGDKEAVAR	SVPAASGGDKEAVAR	3	SVPAASGGDKEAVAR3	19526.9	19329.5	30312.7
Q9WVH8	Q9WVH8	FBLN5_RAT	Fbln5	Fibulin-5	1	SVPADIFQMQATTR	SVPADIFQMQATTR	2	SVPADIFQMQATTR2	334991	368488	381644
Q9WVH8	Q9WVH8	FBLN5_RAT	Fbln5	Fibulin-5	1	SVPADIFQMQATTR	SVPADIFQMQATTR	3	SVPADIFQMQATTR3	59293.2	46971.9	84255
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	SVPADVFQIQATSVYPGAYNAFQIR	SVPADVFQIQATSVYPGAYNAFQIR	3	SVPADVFQIQATSVYPGAYNAFQIR3	344915	302234	337512
A0A0G2K7U7	A0A0G2K7U7	A0A0G2K7U7_RAT	Ankrd27	Ankyrin repeat domain 27	1	SVPDLTGGLQEPEK	SVPDLTGGLQEPEK	2	SVPDLTGGLQEPEK2	13470.2	8850.25	5761.41
A0A8I5ZP70	A0A8I5ZP70	A0A8I5ZP70_RAT	Tom1l2	Target of myb1 like 2 membrane trafficking protein	1	SVPEMDPAATIPR	SVPEMDPAATIPR	2	SVPEMDPAATIPR2	112998	138942	103711
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	SVPFIHVPSPAVPK	SVPFIHVPSPAVPK	2	SVPFIHVPSPAVPK2	6319.79	12040.9	8119.99
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	SVPFIHVPSPAVPK	SVPFIHVPSPAVPK	3	SVPFIHVPSPAVPK3	64459.8	31838.1	46232.5
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	SVPGQESSR	SVPGQESSR	2	SVPGQESSR2			69510.3
B5DFD1	B5DFD1	B5DFD1_RAT	Nudcd1	NudC domain-containing protein 1	1	SVPHYAAIEPNGNGLMIASYK	SVPHYAAIEPNGNGLMIASYK	3	SVPHYAAIEPNGNGLMIASYK3	3793.36	7629.32	4928.7
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	SVPIQSLSELER	SVPIQSLSELER	2	SVPIQSLSELER2	677451	750231	648917
D3Z8X6	D3Z8X6	D3Z8X6_RAT	Dtx3l	E3 ubiquitin-protein ligase	1	SVPIVLETIK	SVPIVLETIK	2	SVPIVLETIK2	24159.2	22727.6	20230.8
Q5XIG4	Q5XIG4	OCAD1_RAT	Ociad1	OCIA domain-containing protein 1	1	SVPLAATSMLITQGLISK	SVPLAATSMLITQGLISK	2	SVPLAATSMLITQGLISK2	4234.28	813.239	4404.81
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	SVPLALQR	SVPLALQR	2	SVPLALQR2	66170.2	61506.1	59047
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	SVPLATTPMTEQRPESTSTAAVK	SVPLATTPMTEQRPESTSTAAVK	3	SVPLATTPMTEQRPESTSTAAVK3	292325	353275	328174
A0A8I6ACU6	A0A8I6ACU6	A0A8I6ACU6_RAT	Glcci1	Glucocorticoid induced 1	1	SVPMPLSNISVPK	SVPMPLSNISVPK	2	SVPMPLSNISVPK2	32317.8	35813.2	27597
P51886	P51886	LUM_RAT	Lum	Lumican	1	SVPMVPPGIK	SVPMVPPGIK	2	SVPMVPPGIK2	2.17324e+07	2.33366e+07	2.46245e+07
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	SVPNTPLRPNQQSVFNSSFSELFVK	SVPNTPLRPNQQSVFNSSFSELFVK	3	SVPNTPLRPNQQSVFNSSFSELFVK3	8261.87	6364.13	6365.9
Q4AEG0	Q4AEG0	Q4AEG0_RAT	Gp9	Glycoprotein 9	1	SVPPGAFDHMPQLWELK	SVPPGAFDHMPQLWELK	2	SVPPGAFDHMPQLWELK2	312860	408018	332493
Q4AEG0	Q4AEG0	Q4AEG0_RAT	Gp9	Glycoprotein 9	1	SVPPGAFDHMPQLWELK	SVPPGAFDHMPQLWELK	3	SVPPGAFDHMPQLWELK3	1.88685e+06	2.09737e+06	2.23605e+06
D3ZYT8	D3ZYT8	D3ZYT8_RAT	Pikfyve	1-phosphatidylinositol-3-phosphate 5-kinase	1	SVPQAVASLK	SVPQAVASLK	2	SVPQAVASLK2	18240.3	27478.8	27723.4
O35568	O35568	FBLN3_RAT	Efemp1	EGF-containing fibulin-like extracellular matrix protein 1	1	SVPSDIFQIQATTIYANTINTFR	SVPSDIFQIQATTIYANTINTFR	3	SVPSDIFQIQATTIYANTINTFR3	17083.3	9445.79	9240.83
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	SVPSIHVPSPAVPK	SVPSIHVPSPAVPK	3	SVPSIHVPSPAVPK3	19899.1	10596.2	16623.8
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	SVPSWFVR	SVPSWFVR	2	SVPSWFVR2	105993	93500.3	87935.7
A0A8I6A9E8	A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	1	SVPTFQSLPDEILSK	SVPTFQSLPDEILSK	2	SVPTFQSLPDEILSK2	63791.1	33052.6	38006.7
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	SVPTIDSGNEDDDSSFK	SVPTIDSGNEDDDSSFK	2	SVPTIDSGNEDDDSSFK2	6582.75		6147.15
M0RAK0	M0RAK0	M0RAK0_RAT	Proser2	Proline and serine rich 2	1	SVPTPLVIAQK	SVPTPLVIAQK	2	SVPTPLVIAQK2	164244	176439	145526
P62278	P62278;M0RCY2	RS13_RAT	Rps13	Small ribosomal subunit protein uS15	0	SVPTWLK	SVPTWLK	2	SVPTWLK2	55937.4	56889	57661.4
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	SVPVEGESELVTAAK	SVPVEGESELVTAAK	2	SVPVEGESELVTAAK2	883680	1.0767e+06	885654
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	SVPVEGESELVTAAK	SVPVEGESELVTAAK	3	SVPVEGESELVTAAK3	6739.51	11509.8	15338.9
Q62651	Q62651	ECH1_RAT	Ech1	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial	1	SVQAAMEK	SVQAAMEK	2	SVQAAMEK2	24577.7	29402.9	30320.6
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	SVQALIADFQGTPTFTYK	SVQALIADFQGTPTFTYK	3	SVQALIADFQGTPTFTYK3	35985.5	41205.2	50281.6
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	SVQAVLVGK	SVQAVLVGK	2	SVQAVLVGK2	42195.8	31081	47527
D3ZYF5	D3ZYF5	D3ZYF5_RAT	Trim58	Tripartite motif-containing 58	1	SVQDAEVWR	SVQDAEVWR	2	SVQDAEVWR2	7774.41	10087.7	13284.7
G3V8S6	G3V8S6	G3V8S6_RAT	Hrc	Histidine rich calcium binding protein	1	SVQEDIGHQPLQPTGPGSGESR	SVQEDIGHQPLQPTGPGSGESR	3	SVQEDIGHQPLQPTGPGSGESR3	14120.7	11774.1	16043.7
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	SVQESGTLPLMEECILSVGIGCVK	SVQESGTLPLMEEC(UniMod:4)ILSVGIGC(UniMod:4)VK	3	SVQESGTLPLMEEC(UniMod:4)ILSVGIGC(UniMod:4)VK3	7302.42	7651.01	4169.63
A0A8I6AEI3	A0A8I6AEI3	A0A8I6AEI3_RAT	Wwox	WW domain-containing oxidoreductase	1	SVQHFAEAFK	SVQHFAEAFK	3	SVQHFAEAFK3	8246.25	9751.14	4563.43
A0A8I5ZVU1	A0A8I5ZVU1	A0A8I5ZVU1_RAT	Uckl1	Uridine-cytidine kinase	1	SVQIPIYDFTTHSR	SVQIPIYDFTTHSR	3	SVQIPIYDFTTHSR3	13611.1	16790.8	7109.45
Q8CJ11	Q8CJ11	AGRG2_RAT	Adgrg2	Adhesion G-protein coupled receptor G2	1	SVQIRPMEQCCCSPR	SVQIRPMEQC(UniMod:4)C(UniMod:4)C(UniMod:4)SPR	3	SVQIRPMEQC(UniMod:4)C(UniMod:4)C(UniMod:4)SPR3	15445.2	13859.6	10491.2
Q68FS3	Q68FS3	FBX7_RAT	Fbxo7	F-box only protein 7	1	SVQLKPGAYVR	SVQLKPGAYVR	3	SVQLKPGAYVR3	20043.3	16007.7	12474.9
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	SVQLLFAK	SVQLLFAK	2	SVQLLFAK2	29944.6	36943.9	37338
P01026	P01026	CO3_RAT	C3	Complement C3	1	SVQLMER	SVQLMER	2	SVQLMER2	2.68336e+06	2.53136e+06	2.35183e+06
Q71RP1	Q71RP1	HPSE_RAT	Hpse	Heparanase	1	SVQLNGQTLK	SVQLNGQTLK	2	SVQLNGQTLK2	60480.1	63551.1	65477.9
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	SVQLVMEYVPLGSLR	SVQLVMEYVPLGSLR	2	SVQLVMEYVPLGSLR2	5403.4	4954.83	11544.6
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	SVQNDSQALAEVLNQLK	SVQNDSQALAEVLNQLK	2	SVQNDSQALAEVLNQLK2	13884.4	10051.5	10130
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	SVQNDSQALAEVLNQLK	SVQNDSQALAEVLNQLK	3	SVQNDSQALAEVLNQLK3	8866.01	6205.37	4079.66
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	SVQNLANLVEFGAK	SVQNLANLVEFGAK	2	SVQNLANLVEFGAK2	22075.4	21692.9	25086.6
D3Z9C0	D3Z9C0	D3Z9C0_RAT	Mios	Meiosis regulator for oocyte development	1	SVQPCDNYIASFAWHPTSQNR	SVQPC(UniMod:4)DNYIASFAWHPTSQNR	3	SVQPC(UniMod:4)DNYIASFAWHPTSQNR3	4522.97	7024.13	10069.1
Q9QZR6	Q9QZR6	SEPT9_RAT	Septin9	Septin-9	1	SVQPISEER	SVQPISEER	2	SVQPISEER2	80313.9	61036.7	66247.9
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	SVQTFADK	SVQTFADK	1	SVQTFADK1	14210.1	8059.75	12649.1
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	SVQTFADK	SVQTFADK	2	SVQTFADK2	869893	880681	873774
P70496	P70496	PLD1_RAT	Pld1	Phospholipase D1	1	SVQTGVGELHGETR	SVQTGVGELHGETR	3	SVQTGVGELHGETR3		1366.77	5167.77
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	SVQTNLGQNQGSSSQNTATPTAK	SVQTNLGQNQGSSSQNTATPTAK	3	SVQTNLGQNQGSSSQNTATPTAK3	264591	324468	304887
B5DEH2	B1WBY7;B5DEH2	ERLN2_RAT	Erlin2	Erlin-2	0	SVQTTLQTDEVK	SVQTTLQTDEVK	2	SVQTTLQTDEVK2	39464.2	25141.3	35300.2
Q99PD4	Q99PD4	ARC1A_RAT	Arpc1a	Actin-related protein 2/3 complex subunit 1A	1	SVQVSTLR	SVQVSTLR	2	SVQVSTLR2	178075	171046	209055
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	SVQVSTNPDGK	SVQVSTNPDGK	2	SVQVSTNPDGK2	3630.26	7470.31	8020.88
O08984	O08984	LBR_RAT	Lbr	Delta(14)-sterol reductase LBR	1	SVSASYQADAK	SVSASYQADAK	2	SVSASYQADAK2	25352.1	23069.8	21567.8
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	SVSDDKLVFVK	SVSDDKLVFVK	2	SVSDDKLVFVK2	12296.4	9524.28	9811.02
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	SVSDDKLVFVK	SVSDDKLVFVK	3	SVSDDKLVFVK3	137115	169511	147825
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	SVSDNDIR	SVSDNDIR	2	SVSDNDIR2	1.19215e+06	1.39051e+06	1.56727e+06
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	SVSDNDIRK	SVSDNDIRK	2	SVSDNDIRK2	27717.2		43459.5
Q07205	Q07205;A0A8I6ADE0;A0A8I6AVQ3;A0A8I5ZMQ1	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	SVSDQFYR	SVSDQFYR	2	SVSDQFYR2	228727	213745	227600
P97523	P97523	MET_RAT	Met	Hepatocyte growth factor receptor	1	SVSDSILECYTPGHTVSAEFPVK	SVSDSILEC(UniMod:4)YTPGHTVSAEFPVK	3	SVSDSILEC(UniMod:4)YTPGHTVSAEFPVK3	2275.58		
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	SVSDYDGK	SVSDYDGK	1	SVSDYDGK1	38285.1	38876.3	31541.4
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	SVSDYDGK	SVSDYDGK	2	SVSDYDGK2	1.92462e+06	2.4431e+06	2.68372e+06
Q8VHK0	Q8VHK0	ACOT8_RAT	Acot8	Acyl-coenzyme A thioesterase 8	1	SVSEDVHVHSLHCYFVR	SVSEDVHVHSLHC(UniMod:4)YFVR	4	SVSEDVHVHSLHC(UniMod:4)YFVR4	6222.4	8959.04	11430
P20759	P20759	IGHG1_RAT		Ig gamma-1 chain C region	1	SVSELPILHQDWLNGR	SVSELPILHQDWLNGR	2	SVSELPILHQDWLNGR2	71547.8	71116.7	40378.8
P20759	P20759	IGHG1_RAT		Ig gamma-1 chain C region	1	SVSELPILHQDWLNGR	SVSELPILHQDWLNGR	3	SVSELPILHQDWLNGR3	3.17315e+06	2.49797e+06	2.71206e+06
P20760	P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	1	SVSELPIVHR	SVSELPIVHR	2	SVSELPIVHR2	1.91645e+06	1.53699e+06	1.56017e+06
P20760	P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	1	SVSELPIVHRDWLNGK	SVSELPIVHRDWLNGK	3	SVSELPIVHRDWLNGK3	67309.9	59240.9	78992.6
P20760	P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	1	SVSELPIVHRDWLNGK	SVSELPIVHRDWLNGK	4	SVSELPIVHRDWLNGK4	44104	52821.6	44603.6
A0A8I5ZPV1	A0A8I5ZPV1	A0A8I5ZPV1_RAT	Tbc1d22a	TBC1 domain family, member 22a	1	SVSESHTPCPSESTSDTVPLQR	SVSESHTPC(UniMod:4)PSESTSDTVPLQR	3	SVSESHTPC(UniMod:4)PSESTSDTVPLQR3	12158.9	14834.1	6547.52
D4A7R3	D4A7R3	D4A7R3_RAT	Nup205	Nucleoporin 205	1	SVSGFLHFDTATK	SVSGFLHFDTATK	3	SVSGFLHFDTATK3		11342.7	6695.58
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	SVSINGVPDDLALGLELSR	SVSINGVPDDLALGLELSR	2	SVSINGVPDDLALGLELSR2	200176	208464	152312
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	SVSINGVPDDLALGLELSR	SVSINGVPDDLALGLELSR	3	SVSINGVPDDLALGLELSR3	19818.5	21876.6	31651.3
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	SVSINGVPDDLALGLELSRR	SVSINGVPDDLALGLELSRR	3	SVSINGVPDDLALGLELSRR3		6398.21	
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SVSIPLFDPVSAK	SVSIPLFDPVSAK	2	SVSIPLFDPVSAK2	3.76601e+06	4.46705e+06	4.43408e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SVSIPLFDPVSAK	SVSIPLFDPVSAK	3	SVSIPLFDPVSAK3	9940.89	8106.63	11915.4
Q6AYS7	Q6AYS7	ACY1A_RAT	Acy1a	Aminoacylase-1A	1	SVSIQYLEAVR	SVSIQYLEAVR	2	SVSIQYLEAVR2	5860.1	4030.29	3160.89
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	SVSLIILLTDGEPTVGETNPK	SVSLIILLTDGEPTVGETNPK	3	SVSLIILLTDGEPTVGETNPK3	40528	36476.2	30215.3
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	SVSLLDKK	SVSLLDKK	2	SVSLLDKK2	16040.9	11880.8	11618.6
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	SVSLNLLQTHFK	SVSLNLLQTHFK	2	SVSLNLLQTHFK2	4745.12	7387.35	4898.23
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	SVSLNLLQTHFK	SVSLNLLQTHFK	3	SVSLNLLQTHFK3	35892.7	41878.4	36547.8
F1LWZ3	F1LWZ3	F1LWZ3_RAT	Rhbdf2	Inactive rhomboid protein	1	SVSLQEPR	SVSLQEPR	2	SVSLQEPR2	17101.2	15910.5	16723.2
M0RC73	M0RC73	M0RC73_RAT	Naa16	N(alpha)-acetyltransferase 16, NatA auxiliary subunit	1	SVSNHSNLPDIVSTVLAQEMK	SVSNHSNLPDIVSTVLAQEMK	3	SVSNHSNLPDIVSTVLAQEMK3	2911.66	1506	1476.85
Q6AY30	Q6AY30	SCPDL_RAT	Sccpdh	Saccharopine dehydrogenase-like oxidoreductase	1	SVSNLKPVPVIGSK	SVSNLKPVPVIGSK	2	SVSNLKPVPVIGSK2	10612.9	13619.8	8013.83
Q6AY30	Q6AY30	SCPDL_RAT	Sccpdh	Saccharopine dehydrogenase-like oxidoreductase	1	SVSNLKPVPVIGSK	SVSNLKPVPVIGSK	3	SVSNLKPVPVIGSK3	317060	300966	309788
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	SVSPLVWCR	SVSPLVWC(UniMod:4)R	2	SVSPLVWC(UniMod:4)R2	126017	151107	131161
Q62632	Q62632	FSTL1_RAT	Fstl1	Follistatin-related protein 1	1	SVSPSASPVVCYQANR	SVSPSASPVVC(UniMod:4)YQANR	2	SVSPSASPVVC(UniMod:4)YQANR2	1013.96		
A0A8I6AA08	A0A8I6AA08	A0A8I6AA08_RAT	Septin6	Septin	1	SVSQGFCFNILCVGETGLGK	SVSQGFC(UniMod:4)FNILC(UniMod:4)VGETGLGK	3	SVSQGFC(UniMod:4)FNILC(UniMod:4)VGETGLGK3		8847.33	
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	SVSQLESLNR	SVSQLESLNR	2	SVSQLESLNR2	36706	40228.1	31368.4
A0A8I6GK59	A0A8I6GK59	A0A8I6GK59_RAT	Bmp2k	BMP-2 inducible kinase	1	SVSQQMFPEQEEYDVFTK	SVSQQMFPEQEEYDVFTK	3	SVSQQMFPEQEEYDVFTK3		3331.63	924.198
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	SVSREINLKDYEGQQK	SVSREINLKDYEGQQK	3	SVSREINLKDYEGQQK3	4403.27	7789.84	13657.6
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	SVSREINLKDYEGQQK	SVSREINLKDYEGQQK	4	SVSREINLKDYEGQQK4	10769.3	9753.26	11438
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	SVSSAYINTK	SVSSAYINTK	2	SVSSAYINTK2	4.47461e+06	4.46364e+06	4.95992e+06
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	SVSSIDSGESSEPWFPAK	SVSSIDSGESSEPWFPAK	2	SVSSIDSGESSEPWFPAK2	123009	138280	136324
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	SVSSIDSGESSEPWFPAK	SVSSIDSGESSEPWFPAK	3	SVSSIDSGESSEPWFPAK3	9662.53	12209.3	7585.49
D3ZFK6	D3ZFK6	D3ZFK6_RAT	Atg16l1	Autophagy related 16-like 1	1	SVSSIPVPQDVVDTHPASGK	SVSSIPVPQDVVDTHPASGK	3	SVSSIPVPQDVVDTHPASGK3	20710.5	19900.5	13012.1
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	SVSSLSNR	SVSSLSNR	2	SVSSLSNR2	28491.8	30139.2	
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	SVSSNVASVSPIPAGSK	SVSSNVASVSPIPAGSK	2	SVSSNVASVSPIPAGSK2	87923.1	69369.1	91088.5
Q9QXU8	Q9QXU8	DC1L1_RAT	Dync1li1	Cytoplasmic dynein 1 light intermediate chain 1	1	SVSSNVASVSPIPAGSK	SVSSNVASVSPIPAGSK	3	SVSSNVASVSPIPAGSK3	29016.8	24246	22419.2
Q9JKC9	Q9JKC9	SYNRG_RAT	Synrg	Synergin gamma	1	SVSSRPQPAGSAAAPASLASTK	SVSSRPQPAGSAAAPASLASTK	3	SVSSRPQPAGSAAAPASLASTK3	14957.5	22004.9	25159.6
D3ZW15	D3ZW15	D3ZW15_RAT	Sec24b	SEC24 homolog B, COPII coat complex component	1	SVSSSLSDAR	SVSSSLSDAR	2	SVSSSLSDAR2	17221.8	15371.5	17451.3
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	SVSSTIFFHCDPLLK	SVSSTIFFHC(UniMod:4)DPLLK	3	SVSSTIFFHC(UniMod:4)DPLLK3	11696	9418.44	1748.22
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	SVSSYGNIR	SVSSYGNIR	2	SVSSYGNIR2	27987.3	30238.7	14719.5
Q63100	Q63100	DC1I1_RAT	Dync1i1	Cytoplasmic dynein 1 intermediate chain 1	1	SVSTPSEAGSQDDLGPLTR	SVSTPSEAGSQDDLGPLTR	2	SVSTPSEAGSQDDLGPLTR2	7441.61	2086.23	3470.67
Q62871	Q62871	DC1I2_RAT	Dync1i2	Cytoplasmic dynein 1 intermediate chain 2	1	SVSTPSEAGSQDSGDGAVGSR	SVSTPSEAGSQDSGDGAVGSR	2	SVSTPSEAGSQDSGDGAVGSR2	119645	121962	103301
Q62871	Q62871	DC1I2_RAT	Dync1i2	Cytoplasmic dynein 1 intermediate chain 2	1	SVSTPSEAGSQDSGDGAVGSR	SVSTPSEAGSQDSGDGAVGSR	3	SVSTPSEAGSQDSGDGAVGSR3	45792	42495.6	47587.6
A0A8I6GEK5	A0A8I6GEK5	A0A8I6GEK5_RAT	AC109901.2	Ig-like domain-containing protein	1	SVSTSLESTVK	SVSTSLESTVK	2	SVSTSLESTVK2	127190	127817	101861
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	SVSTSTTFVQGR	SVSTSTTFVQGR	2	SVSTSTTFVQGR2	440181	484291	481219
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	SVSTTNIAGHFNDESPLGLR	SVSTTNIAGHFNDESPLGLR	3	SVSTTNIAGHFNDESPLGLR3	257899	250188	203601
G3V8Y8	G3V8Y8	G3V8Y8_RAT	Hip1	Huntingtin interacting protein 1	1	SVSVTTAGQCR	SVSVTTAGQC(UniMod:4)R	2	SVSVTTAGQC(UniMod:4)R2	6121.37	12319.3	6130.19
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	SVSYNPQHVHIYSASWGPDDDGK	SVSYNPQHVHIYSASWGPDDDGK	3	SVSYNPQHVHIYSASWGPDDDGK3	17681.3	9929.37	12543.1
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	SVSYNPQHVHIYSASWGPDDDGK	SVSYNPQHVHIYSASWGPDDDGK	4	SVSYNPQHVHIYSASWGPDDDGK4	93956.4	102906	105713
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	SVTAFFNWLR	SVTAFFNWLR	2	SVTAFFNWLR2	327174	293844	326218
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	SVTAFFTWLR	SVTAFFTWLR	2	SVTAFFTWLR2	5750.34	4443.53	5151.43
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	SVTCDVGYPALK	SVTC(UniMod:4)DVGYPALK	2	SVTC(UniMod:4)DVGYPALK2	127237	123422	122794
F1LTX4	F1LTX4	F1LTX4_RAT	Lrrn4	Leucine rich repeat neuronal 4	1	SVTDIYATAR	SVTDIYATAR	2	SVTDIYATAR2	11283.7	9580.69	9335.45
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	SVTDSIRDEYAFLQK	SVTDSIRDEYAFLQK	2	SVTDSIRDEYAFLQK2	1532.91	2643.76	2532.81
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	SVTDSIRDEYAFLQK	SVTDSIRDEYAFLQK	3	SVTDSIRDEYAFLQK3	174359	167321	130411
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	SVTDSVMGPK	SVTDSVMGPK	2	SVTDSVMGPK2	18651.7	21725.5	23397.7
F1LVX1	F1LVX1	F1LVX1_RAT	Dnajc1	DnaJ heat shock protein family (Hsp40) member C1	1	SVTDVTTK	SVTDVTTK	2	SVTDVTTK2	21652.7	35198	33455
P63102	P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	1	SVTEQGAELSNEER	SVTEQGAELSNEER	2	SVTEQGAELSNEER2	63341.4	52351.8	88667.7
P63102	P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	1	SVTEQGAELSNEER	SVTEQGAELSNEER	3	SVTEQGAELSNEER3	1.25935e+06	1.32981e+06	1.5082e+06
P63102	P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	1	SVTEQGAELSNEERNLLSVAYKNVVGAR	SVTEQGAELSNEERNLLSVAYKNVVGAR	4	SVTEQGAELSNEERNLLSVAYKNVVGAR4	4874.61	5573.19	10446
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	SVTHANALTVMGK	SVTHANALTVMGK	2	SVTHANALTVMGK2	3992.13	5874.31	5407.14
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	SVTHANALTVMGK	SVTHANALTVMGK	3	SVTHANALTVMGK3	27588.7	27463.7	35838.4
D4A0G7	P51156;D4A0G7	D4A0G7_RAT	Rab37	RAB37, member RAS oncogene family	0	SVTHAYYR	SVTHAYYR	2	SVTHAYYR2	40754.8	27419.2	23114.1
O35547	O35547	ACSL4_RAT	Acsl4	Long-chain-fatty-acid--CoA ligase 4	1	SVTHFDSLAVIDIPGADTLDK	SVTHFDSLAVIDIPGADTLDK	3	SVTHFDSLAVIDIPGADTLDK3	22429	17333.4	17572.5
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	SVTLHIYGLSLTLSAQWPR	SVTLHIYGLSLTLSAQWPR	3	SVTLHIYGLSLTLSAQWPR3	22614.8	15678.3	16295.1
F7ELS2	F7ELS2;A0A8I6GM53	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	0	SVTLLVK	SVTLLVK	1	SVTLLVK1	5609.08	5082.52	2950.95
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	SVTLTVNK	SVTLTVNK	2	SVTLTVNK2	27980.6	35537.5	27853.3
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	SVTMDSAPK	SVTMDSAPK	2	SVTMDSAPK2	11516.9		
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	SVTMDSAPKPFTDVSIVMR	SVTMDSAPKPFTDVSIVMR	3	SVTMDSAPKPFTDVSIVMR3	18600.2	42292.6	35261.9
P07633	P07633	PCCB_RAT	Pccb	Propionyl-CoA carboxylase beta chain, mitochondrial	1	SVTNEDVTQEQLGGAK	SVTNEDVTQEQLGGAK	2	SVTNEDVTQEQLGGAK2	10629.4	8456.14	10988.3
P07633	P07633	PCCB_RAT	Pccb	Propionyl-CoA carboxylase beta chain, mitochondrial	1	SVTNEDVTQEQLGGAK	SVTNEDVTQEQLGGAK	3	SVTNEDVTQEQLGGAK3		4999.27	
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	SVTPASTLTK	SVTPASTLTK	2	SVTPASTLTK2	37650.1	32622.2	58872.1
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	SVTPDTALSLEGK	SVTPDTALSLEGK	2	SVTPDTALSLEGK2	15862.4	19490.1	20331.7
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	SVTQEGAAPLPK	SVTQEGAAPLPK	2	SVTQEGAAPLPK2	802882	873367	855774
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	SVTQQPGSEITAPQK	SVTQQPGSEITAPQK	2	SVTQQPGSEITAPQK2	156703	211001	209703
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	SVTQQPGSEITAPQK	SVTQQPGSEITAPQK	3	SVTQQPGSEITAPQK3			6370.71
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	SVTTVLQPCSLFMEK	SVTTVLQPC(UniMod:4)SLFMEK	2	SVTTVLQPC(UniMod:4)SLFMEK2	11235.2	13559.5	11887.7
Q5M890	Q5M890	Q5M890_RAT	Apon	Apolipoprotein N	1	SVTVPEACTSEQGWVLR	SVTVPEAC(UniMod:4)TSEQGWVLR	2	SVTVPEAC(UniMod:4)TSEQGWVLR2	5.66323e+06	5.70792e+06	6.17915e+06
Q5M890	Q5M890	Q5M890_RAT	Apon	Apolipoprotein N	1	SVTVPEACTSEQGWVLR	SVTVPEAC(UniMod:4)TSEQGWVLR	3	SVTVPEAC(UniMod:4)TSEQGWVLR3	654459	749512	873971
A0A8I5ZM79	A0A8I5ZM79	A0A8I5ZM79_RAT	Psmd7	Proteasome 26S subunit, non-ATPase 7	1	SVVALHNLINNK	SVVALHNLINNK	2	SVVALHNLINNK2	13853.2	16230.8	9926.99
A0A8I5ZM79	A0A8I5ZM79	A0A8I5ZM79_RAT	Psmd7	Proteasome 26S subunit, non-ATPase 7	1	SVVALHNLINNK	SVVALHNLINNK	3	SVVALHNLINNK3	123944	139394	155462
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	SVVAPPGAPK	SVVAPPGAPK	2	SVVAPPGAPK2	433606	518720	410324
Q5XI59	Q5XI59	RNF10_RAT	Rnf10	E3 ubiquitin-protein ligase RNF10	1	SVVATESR	SVVATESR	2	SVVATESR2	11001.7	4834.41	
D3ZEJ9	D3ZEJ9	D3ZEJ9_RAT	RGD1310429	Similar to Protein Njmu-R1	1	SVVAVLEEFMR	SVVAVLEEFMR	2	SVVAVLEEFMR2	12212	10757.9	12752.8
Q6U6G5	Q6U6G5;D4AA59	ZC3HF_RAT	Zc3h15	Zinc finger CCCH domain-containing protein 15	0	SVVCAFFK	SVVC(UniMod:4)AFFK	2	SVVC(UniMod:4)AFFK2	19462.4	26765.5	20946.8
D3Z9G1	D3Z9G1	D3Z9G1_RAT	Fbxw17	F-box and WD-40 domain protein 17	1	SVVCTVSSDCTVR	SVVC(UniMod:4)TVSSDC(UniMod:4)TVR	2	SVVC(UniMod:4)TVSSDC(UniMod:4)TVR2	6324.63	4184.92	5736.35
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	SVVDIGLIK	SVVDIGLIK	1	SVVDIGLIK1	27033.1	18026.3	23479.9
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	SVVDIGLIK	SVVDIGLIK	2	SVVDIGLIK2	1.22035e+06	905933	940569
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	SVVETLCTK	SVVETLC(UniMod:4)TK	2	SVVETLC(UniMod:4)TK2	150952	146807	161181
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	SVVGTFGFK	SVVGTFGFK	2	SVVGTFGFK2	18468.7	17608.6	12852.7
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	SVVHPFLSR	SVVHPFLSR	2	SVVHPFLSR2	30639.5	35148.9	37204.8
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	SVVISPLDPNHK	SVVISPLDPNHK	3	SVVISPLDPNHK3	17591.9	18514.5	18448
D3ZUE1	D3ZUE1	GA2L2_RAT	Gas2l2	GAS2-like protein 2	1	SVVLCLLELGR	SVVLC(UniMod:4)LLELGR	2	SVVLC(UniMod:4)LLELGR2	59295.2	51139.9	50202.8
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	SVVLCLLEVAR	SVVLC(UniMod:4)LLEVAR	2	SVVLC(UniMod:4)LLEVAR2	59295.2	51139.9	50202.8
P16617	P16617	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	1	SVVLMSHLGRPDGVPMPDK	SVVLMSHLGRPDGVPMPDK	3	SVVLMSHLGRPDGVPMPDK3	77135.7	66342.4	71581.4
P16617	P16617	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	1	SVVLMSHLGRPDGVPMPDK	SVVLMSHLGRPDGVPMPDK	4	SVVLMSHLGRPDGVPMPDK4	122617	97249.4	115950
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	SVVLYVILAPFDNEQSDLVHR	SVVLYVILAPFDNEQSDLVHR	3	SVVLYVILAPFDNEQSDLVHR3	43583.1	33675.8	30689.9
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	SVVMPMEK	SVVMPMEK	2	SVVMPMEK2	32750.8	35110.1	31998.2
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	SVVMTPVPLFSK	SVVMTPVPLFSK	2	SVVMTPVPLFSK2	73402	69218.3	92208.9
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	SVVNMEWDK	SVVNMEWDK	2	SVVNMEWDK2	68676.7	52801.4	63848.8
P53676	P53676	AP3M1_RAT	Ap3m1	AP-3 complex subunit mu-1	1	SVVNSITGSSNVGDTLPTGQLSNIPWR	SVVNSITGSSNVGDTLPTGQLSNIPWR	3	SVVNSITGSSNVGDTLPTGQLSNIPWR3	73257.9	61338.8	69837.1
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	SVVPGGGAVEAALSIYLENYATSMGSR	SVVPGGGAVEAALSIYLENYATSMGSR	3	SVVPGGGAVEAALSIYLENYATSMGSR3	9854.06		
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	SVVPQGGPHSLR	SVVPQGGPHSLR	2	SVVPQGGPHSLR2	41178.8	33738.2	31854.2
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	SVVPQGGPHSLR	SVVPQGGPHSLR	3	SVVPQGGPHSLR3	294471	310129	305330
P53676	P53676	AP3M1_RAT	Ap3m1	AP-3 complex subunit mu-1	1	SVVSQSVCDYFFEAQEK	SVVSQSVC(UniMod:4)DYFFEAQEK	3	SVVSQSVC(UniMod:4)DYFFEAQEK3	33222	32917.2	27744.4
B2GV54	B2GV54	NCEH1_RAT	Nceh1	Neutral cholesterol ester hydrolase 1	1	SVVYIHGGGWALASAK	SVVYIHGGGWALASAK	2	SVVYIHGGGWALASAK2	2969.27	1395.59	2030.14
B2GV54	B2GV54	NCEH1_RAT	Nceh1	Neutral cholesterol ester hydrolase 1	1	SVVYIHGGGWALASAK	SVVYIHGGGWALASAK	3	SVVYIHGGGWALASAK3	52008	45630.1	39003.9
Q63468	Q63468	KPRA_RAT	Prpsap1	Phosphoribosyl pyrophosphate synthase-associated protein 1	1	SVVYQETNGETR	SVVYQETNGETR	2	SVVYQETNGETR2	6654.47	8335.49	1044.25
Q3KR59	Q3KR59	UBP10_RAT	Usp10	Ubiquitin carboxyl-terminal hydrolase 10	1	SVVYQQSSK	SVVYQQSSK	2	SVVYQQSSK2	40824.6	37350.5	37354.6
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	SVWEYVDR	SVWEYVDR	2	SVWEYVDR2	15341.2	15785.9	18027.5
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	SVWHGSDPSGR	SVWHGSDPSGR	3	SVWHGSDPSGR3	6995.95	10346.7	5751.21
A0A0G2JYR1	A0A0G2JYR1	A0A0G2JYR1_RAT	Exoc6b	Exocyst complex component	1	SVYDGEEHGR	SVYDGEEHGR	2	SVYDGEEHGR2	3743.76		2742.96
Q68HB8	Q68HB8	Q68HB8_RAT	Pcdh7	Protocadherin 7	1	SVYEADLAENSAPGTPILQLR	SVYEADLAENSAPGTPILQLR	3	SVYEADLAENSAPGTPILQLR3	3967.85	2797.72	3310.85
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	SVYHLEDIVR	SVYHLEDIVR	3	SVYHLEDIVR3	32588.6	32290.6	25008.8
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	SVYPQEFQDK	SVYPQEFQDK	2	SVYPQEFQDK2	2.89192e+06	3.12106e+06	3.16611e+06
A0A8I6A3H1	A0A8I6A3H1	A0A8I6A3H1_RAT	Ero1b	Endoplasmic reticulum oxidoreductase 1 beta	1	SVYRPLNPLAPSR	SVYRPLNPLAPSR	3	SVYRPLNPLAPSR3	6289.06		5237.7
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	SVYSWDIVVQR	SVYSWDIVVQR	2	SVYSWDIVVQR2	56155	29286.5	50487.1
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	SVYWEEEPAEVR	SVYWEEEPAEVR	2	SVYWEEEPAEVR2	20072.9	33816.3	23264.1
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	SVYWEEEPAEVRR	SVYWEEEPAEVRR	3	SVYWEEEPAEVRR3	69781.5	105657	94565.3
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	SWAGDIGLTR	SWAGDIGLTR	2	SWAGDIGLTR2	98865.6	96083.2	102161
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	SWAQASVTHGAHGDGGR	SWAQASVTHGAHGDGGR	3	SWAQASVTHGAHGDGGR3	23498.9	21400	19057.5
Q6MG48	Q6MG48	PRC2A_RAT	Prrc2a	Protein PRRC2A	1	SWAQASVTHGAHGDGGR	SWAQASVTHGAHGDGGR	4	SWAQASVTHGAHGDGGR4	20734	14211.4	16625.1
Q3KR59	Q3KR59	UBP10_RAT	Usp10	Ubiquitin carboxyl-terminal hydrolase 10	1	SWASLFHDSKPSSSSPVAYVETK	SWASLFHDSKPSSSSPVAYVETK	4	SWASLFHDSKPSSSSPVAYVETK4	4464.51	11396.3	4891.42
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	SWCALITETAGSLK	SWC(UniMod:4)ALITETAGSLK	2	SWC(UniMod:4)ALITETAGSLK2	28665.6	49287.6	24150.3
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	SWCALITETAGSLK	SWC(UniMod:4)ALITETAGSLK	3	SWC(UniMod:4)ALITETAGSLK3		6224.17	
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	SWCALITETAGSLKVPAPASR	SWC(UniMod:4)ALITETAGSLKVPAPASR	3	SWC(UniMod:4)ALITETAGSLKVPAPASR3	6851.29	2461.43	
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	SWCSGHLHLR	SWC(UniMod:4)SGHLHLR	3	SWC(UniMod:4)SGHLHLR3	10763.7	1822.08	3056.35
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	SWDIFFR	SWDIFFR	2	SWDIFFR2	187323	200351	200338
F1LPV0	F1LPV0	F1LPV0_RAT	Nars1	asparagine--tRNA ligase	1	SWDSEEILEGYK	SWDSEEILEGYK	2	SWDSEEILEGYK2	15655.4	7262.89	5800.42
D3ZSZ6	F1M5T2;D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	0	SWEDKQK	SWEDKQK	2	SWEDKQK2	8789.47		35820.4
Q91ZW1	Q91ZW1	TFAM_RAT	Tfam	Transcription factor A, mitochondrial	1	SWEEQMAEVGR	SWEEQMAEVGR	2	SWEEQMAEVGR2	11533.4	20055.7	14942.8
O55043	O55043	ARHG7_RAT	Arhgef7	Rho guanine nucleotide exchange factor 7	1	SWEGDDIK	SWEGDDIK	2	SWEGDDIK2	15989.6	24098.2	25050.3
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	SWEMYLGLSWSNVVYYSPDK	SWEMYLGLSWSNVVYYSPDK	3	SWEMYLGLSWSNVVYYSPDK3	4520.22	4525.93	3520.58
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	SWEMYLGLSWSNVVYYSPDKVR	SWEMYLGLSWSNVVYYSPDKVR	3	SWEMYLGLSWSNVVYYSPDKVR3	78933.7	65835.2	62947.8
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	SWETETDR	SWETETDR	2	SWETETDR2	22137	15697.9	17236.5
A0A0G2K7U7	A0A0G2K7U7	A0A0G2K7U7_RAT	Ankrd27	Ankyrin repeat domain 27	1	SWETMGR	SWETMGR	2	SWETMGR2	4809.27		
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	SWFEGQGLAGK	SWFEGQGLAGK	2	SWFEGQGLAGK2	18968.9	22899.7	18397
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	SWGEQCTETPDANSR	SWGEQC(UniMod:4)TETPDANSR	2	SWGEQC(UniMod:4)TETPDANSR2	16445.3	18034.9	18980.9
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	SWGTELWDQFDSLDK	SWGTELWDQFDSLDK	2	SWGTELWDQFDSLDK2	7257.97	9926.49	4043.22
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	SWHAATR	SWHAATR	2	SWHAATR2	73800		19590.1
D3ZCT7	D3ZCT7	D3ZCT7_RAT	Sec23b	Protein transport protein SEC23	1	SWHDIEKDNAR	SWHDIEKDNAR	3	SWHDIEKDNAR3	9551.76	10937.4	6374.02
F7FE56	F7FE56	F7FE56_RAT	Tpd52l1	TPD52 like 1	1	SWHDMQTTTAYK	SWHDMQTTTAYK	2	SWHDMQTTTAYK2	17083.6	9345.18	11968.1
F7FE56	F7FE56	F7FE56_RAT	Tpd52l1	TPD52 like 1	1	SWHDMQTTTAYK	SWHDMQTTTAYK	3	SWHDMQTTTAYK3	27240.7	33497.5	20660.2
Q6PCT3	Q6PCT3	TPD54_RAT	Tpd52l2	Tumor protein D54	1	SWHDVQGSTAYVK	SWHDVQGSTAYVK	3	SWHDVQGSTAYVK3	12620.2	9416.18	11565.6
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	SWHNVYCVINNQEMGFYK	SWHNVYC(UniMod:4)VINNQEMGFYK	3	SWHNVYC(UniMod:4)VINNQEMGFYK3	215445	260146	233399
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	SWHPEEFNCAHCK	SWHPEEFNC(UniMod:4)AHC(UniMod:4)K	2	SWHPEEFNC(UniMod:4)AHC(UniMod:4)K2	10603.2	15421.8	10537.1
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	SWHPEEFNCAHCK	SWHPEEFNC(UniMod:4)AHC(UniMod:4)K	3	SWHPEEFNC(UniMod:4)AHC(UniMod:4)K3	28713.1	36116.5	49996.9
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	SWHPEEFNCAHCK	SWHPEEFNC(UniMod:4)AHC(UniMod:4)K	4	SWHPEEFNC(UniMod:4)AHC(UniMod:4)K4	31039.5	40921.6	27925.1
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	SWIEEQEMGSFLSVAK	SWIEEQEMGSFLSVAK	2	SWIEEQEMGSFLSVAK2	4636.43	7668.44	10853.2
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	SWIEGIGAAVQALK	SWIEGIGAAVQALK	2	SWIEGIGAAVQALK2	84818.3	66189.8	65688.5
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	SWIEGIGAAVQALK	SWIEGIGAAVQALK	3	SWIEGIGAAVQALK3	8809.67	9127.91	13492.7
D3ZRX9	D3ZRX9	D3ZRX9_RAT	Cnn2	Calponin	1	SWIEGLTGLSIGPDFQK	SWIEGLTGLSIGPDFQK	2	SWIEGLTGLSIGPDFQK2	179417	240310	230696
D3ZRX9	D3ZRX9	D3ZRX9_RAT	Cnn2	Calponin	1	SWIEGLTGLSIGPDFQK	SWIEGLTGLSIGPDFQK	3	SWIEGLTGLSIGPDFQK3	47506.5	54743.2	45167.1
P23640	P23640	RB27A_RAT	Rab27a	Ras-related protein Rab-27A	1	SWIPEGVVR	SWIPEGVVR	2	SWIPEGVVR2	582761	577501	644674
D3ZQ30	D3ZQ30	D3ZQ30_RAT	Telo2	Telomere length regulation protein TEL2 homolog	1	SWLADVAERDVDEDCR	SWLADVAERDVDEDC(UniMod:4)R	3	SWLADVAERDVDEDC(UniMod:4)R3	6332.4	4622.05	1126.44
A0A0G2K8D1	A0A0G2K8D1	A0A0G2K8D1_RAT	Mospd2	Motile sperm domain containing 2	1	SWLGPEAVSLLK	SWLGPEAVSLLK	2	SWLGPEAVSLLK2	19345.2	6913.53	14225.3
D3ZF32	D3ZF32	D3ZF32_RAT	Treml2	Triggering receptor expressed on myeloid cells-like 2	1	SWLHLPEGPETLWK	SWLHLPEGPETLWK	3	SWLHLPEGPETLWK3	1645.7		3591.24
D3ZF32	D3ZF32	D3ZF32_RAT	Treml2	Triggering receptor expressed on myeloid cells-like 2	1	SWLHLPEGPETLWKPACSK	SWLHLPEGPETLWKPAC(UniMod:4)SK	4	SWLHLPEGPETLWKPAC(UniMod:4)SK4	25354.4	18842.9	15680.2
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	SWLHNDLK	SWLHNDLK	2	SWLHNDLK2	23273.2	13259.1	15367
A0A8I6AZI9	A0A8I6AZI9	A0A8I6AZI9_RAT	Ubash3a	Ubiquitin associated and SH3 domain containing, A	1	SWLHQCTTTDGK	SWLHQC(UniMod:4)TTTDGK	2	SWLHQC(UniMod:4)TTTDGK2	4234.8		
A0A8I6AZI9	A0A8I6AZI9	A0A8I6AZI9_RAT	Ubash3a	Ubiquitin associated and SH3 domain containing, A	1	SWLHQCTTTDGK	SWLHQC(UniMod:4)TTTDGK	3	SWLHQC(UniMod:4)TTTDGK3	7337.2	5293.57	6560.42
P51583	P51583;A0A0G2K5S4	PUR6_RAT	Paics	Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase	0	SWLPQNCTLVDMK	SWLPQNC(UniMod:4)TLVDMK	2	SWLPQNC(UniMod:4)TLVDMK2	33141.2	16159.3	27177.5
A0A8I6AS17	A0A8I6AS17	A0A8I6AS17_RAT	Bsdc1	BSD domain containing 1	1	SWLQQSYQAVK	SWLQQSYQAVK	2	SWLQQSYQAVK2	29060.4	29231.9	32858.2
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	SWLSQVCNVCQK	SWLSQVC(UniMod:4)NVC(UniMod:4)QK	2	SWLSQVC(UniMod:4)NVC(UniMod:4)QK2	23062.6	19334.4	27296.4
D4ABM5	D4ABM5	D4ABM5_RAT	Mrps34	Mitochondrial ribosomal protein S34	1	SWLWQHDEPCYWR	SWLWQHDEPC(UniMod:4)YWR	3	SWLWQHDEPC(UniMod:4)YWR3	8238.85	5205.37	
Q4V8E2	Q4V8E2	Q4V8E2_RAT	Psmd14	Proteasome 26S subunit, non-ATPase 14	1	SWMEGLTLQDYSEHCK	SWMEGLTLQDYSEHC(UniMod:4)K	3	SWMEGLTLQDYSEHC(UniMod:4)K3	42985.1	52868.6	38631.6
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	SWMTPCPEEK	SWMTPC(UniMod:4)PEEK	2	SWMTPC(UniMod:4)PEEK2	4.21935e+06	4.3828e+06	4.14317e+06
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	SWMTPCPEEKAQYVLISPEASSR	SWMTPC(UniMod:4)PEEKAQYVLISPEASSR	3	SWMTPC(UniMod:4)PEEKAQYVLISPEASSR3	2672.38	4357.34	10208.2
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	SWNALAAPSEK	SWNALAAPSEK	2	SWNALAAPSEK2	23400.1	22804.9	26810.7
P31399	P31399;A0A8I5ZY66	ATP5H_RAT	Atp5pd	ATP synthase subunit d, mitochondrial	0	SWNETFHTR	SWNETFHTR	2	SWNETFHTR2	94675.5	83004.7	95786.3
P31399	P31399;A0A8I5ZY66	ATP5H_RAT	Atp5pd	ATP synthase subunit d, mitochondrial	0	SWNETFHTR	SWNETFHTR	3	SWNETFHTR3	210667	168597	209611
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	SWNLGLSNTK	SWNLGLSNTK	2	SWNLGLSNTK2	31652.2	35881.6	40775.6
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	SWNNLYCVLR	SWNNLYC(UniMod:4)VLR	2	SWNNLYC(UniMod:4)VLR2	37149.8	40834.7	32090.7
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	SWNRLEDFDQIFWGQK	SWNRLEDFDQIFWGQK	3	SWNRLEDFDQIFWGQK3	15137.1	23625.8	17629.5
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	SWNWLNGEDSAIQETVK	SWNWLNGEDSAIQETVK	3	SWNWLNGEDSAIQETVK3	14417.3	19385.1	11225.4
Q6P691	Q6P691	Q6P691_RAT	C2cd2	C2 calcium-dependent domain containing 2	1	SWPAPPLVSATK	SWPAPPLVSATK	2	SWPAPPLVSATK2	52050.3	47356.1	66210.1
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	SWPGCQECPACYR	SWPGC(UniMod:4)QEC(UniMod:4)PAC(UniMod:4)YR	2	SWPGC(UniMod:4)QEC(UniMod:4)PAC(UniMod:4)YR2	270817	245140	224982
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	SWPGCQECPACYR	SWPGC(UniMod:4)QEC(UniMod:4)PAC(UniMod:4)YR	3	SWPGC(UniMod:4)QEC(UniMod:4)PAC(UniMod:4)YR3	4830.15	7909.5	
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	SWPISISDTEVSLDVSSGDLKK	SWPISISDTEVSLDVSSGDLKK	3	SWPISISDTEVSLDVSSGDLKK3	183654	229191	188649
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	SWPSFPWQVR	SWPSFPWQVR	2	SWPSFPWQVR2	9.59003e+06	9.34457e+06	1.17971e+07
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	SWPSFPWQVR	SWPSFPWQVR	3	SWPSFPWQVR3	85844.6	79205.4	83645.1
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	SWPVDFHWEEPSSR	SWPVDFHWEEPSSR	2	SWPVDFHWEEPSSR2	22376.6	23027	19949
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	SWPVDFHWEEPSSR	SWPVDFHWEEPSSR	3	SWPVDFHWEEPSSR3	153227	197522	172397
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	SWPVHNGELVSDVDEIFK	SWPVHNGELVSDVDEIFK	3	SWPVHNGELVSDVDEIFK3		5509.71	3267.49
Q9Z1W6	Q9Z1W6	LYRIC_RAT	Mtdh	Protein LYRIC	1	SWQDELAQQAEEGSAR	SWQDELAQQAEEGSAR	2	SWQDELAQQAEEGSAR2	25825.7	10426.1	12454.3
Q9Z1W6	Q9Z1W6	LYRIC_RAT	Mtdh	Protein LYRIC	1	SWQDELAQQAEEGSAR	SWQDELAQQAEEGSAR	3	SWQDELAQQAEEGSAR3	7850.62	9936.47	5761.37
Q63616	Q63616	VP33B_RAT	Vps33b	Vacuolar protein sorting-associated protein 33B	1	SWQGLDEVVR	SWQGLDEVVR	2	SWQGLDEVVR2	18454.5	20475.5	21582
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	SWQGVTIYFSGHETPGEGEHK	SWQGVTIYFSGHETPGEGEHK	4	SWQGVTIYFSGHETPGEGEHK4	2119.46		8136.09
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	SWRNDLVSATK	SWRNDLVSATK	2	SWRNDLVSATK2	32583	38967.5	38490.5
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	SWRNDLVSATK	SWRNDLVSATK	3	SWRNDLVSATK3	706800	901836	916211
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	SWRNDLVSATKTQIADAK	SWRNDLVSATKTQIADAK	4	SWRNDLVSATKTQIADAK4	7924.51	13991.9	14513.6
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	SWSHYTVPAGMTVIQWVSDFSER	SWSHYTVPAGMTVIQWVSDFSER	3	SWSHYTVPAGMTVIQWVSDFSER3	41371.9	39964.5	34288.7
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	SWSNIPFITVPLSR	SWSNIPFITVPLSR	2	SWSNIPFITVPLSR2	5815.89	3231.79	
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	SWSPDASSLPLK	SWSPDASSLPLK	2	SWSPDASSLPLK2	129349	105644	113378
B1PLB1	B1PLB1	B1PLB1_RAT	Cd34	CD34 molecule	1	SWSPTGER	SWSPTGER	2	SWSPTGER2	389519	422628	427787
A0A8I5ZMX2	A0A8I5ZMX2	A0A8I5ZMX2_RAT	Adamts3	ADAM metallopeptidase with thrombospondin type 1, motif 3	1	SWSQCSKPCGGGFQYTK	SWSQC(UniMod:4)SKPC(UniMod:4)GGGFQYTK	3	SWSQC(UniMod:4)SKPC(UniMod:4)GGGFQYTK3	3789.04	11910.1	18205.2
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SWSTAVAEITSDYLR	SWSTAVAEITSDYLR	2	SWSTAVAEITSDYLR2	137211	78614.8	75207.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	SWSTAVAEITSDYLR	SWSTAVAEITSDYLR	3	SWSTAVAEITSDYLR3	38562.3	69544.8	63093.9
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	SWSTAVK	SWSTAVK	2	SWSTAVK2	34662.8	38410.8	34042.6
D4AA31	D4AA31	D4AA31_RAT	Prcp	Prolylcarboxypeptidase	1	SWSVINR	SWSVINR	2	SWSVINR2	83688.7	72416	77924
Q7TP53	Q7TP53	Q7TP53_RAT	Il2rg	Ab2-183	1	SWTEQIVDHEPR	SWTEQIVDHEPR	3	SWTEQIVDHEPR3	11714.1	11515.8	13057.8
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	SWTLGQQK	SWTLGQQK	2	SWTLGQQK2	120982	130619	158762
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	SWTLTAPPGFR	SWTLTAPPGFR	2	SWTLTAPPGFR2	1.86414e+06	1.85514e+06	2.07111e+06
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	SWTLTAPPGFR	SWTLTAPPGFR	3	SWTLTAPPGFR3	10442.6	13038	7368.5
M0R915	M0R915;A0A8I6GLQ4	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	0	SWTPQEMAAAGFYYTGVR	SWTPQEMAAAGFYYTGVR	3	SWTPQEMAAAGFYYTGVR3	5807.48	7791	8859.38
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	SWTVEDLQK	SWTVEDLQK	2	SWTVEDLQK2	191971	190955	198986
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	SWVCDGAADCK	SWVC(UniMod:4)DGAADC(UniMod:4)K	2	SWVC(UniMod:4)DGAADC(UniMod:4)K2	31008.5	29833.3	31142.5
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	SWVCDGAADCKDK	SWVC(UniMod:4)DGAADC(UniMod:4)KDK	2	SWVC(UniMod:4)DGAADC(UniMod:4)KDK2	8528.14	5621.8	8303.19
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	SWVCDGAADCKDK	SWVC(UniMod:4)DGAADC(UniMod:4)KDK	3	SWVC(UniMod:4)DGAADC(UniMod:4)KDK3	124023	142772	141000
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	SWVEGPSPATAQVYELPDSPSSAR	SWVEGPSPATAQVYELPDSPSSAR	3	SWVEGPSPATAQVYELPDSPSSAR3	102563	108697	133532
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	SWVLHECLER	SWVLHEC(UniMod:4)LER	3	SWVLHEC(UniMod:4)LER3	9205.67	11396.9	3671.49
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	SWVNQMESQTGEASK	SWVNQMESQTGEASK	2	SWVNQMESQTGEASK2	34583.4	36231.8	45532.8
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	SWVNQMESQTGEASK	SWVNQMESQTGEASK	3	SWVNQMESQTGEASK3	2732.53		2492.45
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	SWVQFNSNSQLMYGLPDSSHVGK	SWVQFNSNSQLMYGLPDSSHVGK	3	SWVQFNSNSQLMYGLPDSSHVGK3	24830.2	32141	31192.5
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	SWVQTLRPVNAK	SWVQTLRPVNAK	2	SWVQTLRPVNAK2	4033.63	7954.07	4051.51
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	SWVQTLRPVNAK	SWVQTLRPVNAK	3	SWVQTLRPVNAK3	286960	253914	250422
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SWWGSYWEPSLAR	SWWGSYWEPSLAR	2	SWWGSYWEPSLAR2	3.13182e+06	6.55733e+06	3.4321e+06
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SWWGSYWEPSLAR	SWWGSYWEPSLAR	3	SWWGSYWEPSLAR3	4223.01	11412.7	7432.69
Q9QYW5	Q9QYW5	EMP3_RAT	Emp3	Epithelial membrane protein 3	1	SWWTLPEK	SWWTLPEK	2	SWWTLPEK2	37805.4	30218.1	31741.8
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	SWYCAENLDR	SWYC(UniMod:4)AENLDR	2	SWYC(UniMod:4)AENLDR2	182044	198311	197891
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	SWYCAENLDRK	SWYC(UniMod:4)AENLDRK	2	SWYC(UniMod:4)AENLDRK2	24610.3	35109.1	33463.4
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	SWYCAENLDRK	SWYC(UniMod:4)AENLDRK	3	SWYC(UniMod:4)AENLDRK3	296889	365736	377290
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SWYIEDNINK	SWYIEDNINK	2	SWYIEDNINK2	9.13131e+06	1.0256e+07	1.03616e+07
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	SWYISENMR	SWYISENMR	2	SWYISENMR2	405673	382588	365133
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	SYAAAVANR	SYAAAVANR	2	SYAAAVANR2	48459.4	53397.4	44312.9
Q6P7R8	Q6P7R8	DHB12_RAT	Hsd17b12	Very-long-chain 3-oxoacyl-CoA reductase	1	SYAEELAK	SYAEELAK	2	SYAEELAK2	209594	265402	225752
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	SYAELIK	SYAELIK	2	SYAELIK2	107947	134289	88623.8
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	SYAESSSSSSTSSSESLDSPAPGR	SYAESSSSSSTSSSESLDSPAPGR	3	SYAESSSSSSTSSSESLDSPAPGR3	3884.26	7012.98	3119.45
F1LQ91	F1LQ91;Q63603	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	0	SYASTPELR	SYASTPELR	2	SYASTPELR2	4095.42	12414.5	9664.73
F1LQ91	F1LQ91;Q63603	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	0	SYASTPELRK	SYASTPELRK	3	SYASTPELRK3			4108.7
P21775	P07871;P21775	THIKA_RAT	Acaa1a	3-ketoacyl-CoA thiolase A, peroxisomal	0	SYAVVGVPPDIMGIGPAYAIPAALQK	SYAVVGVPPDIMGIGPAYAIPAALQK	3	SYAVVGVPPDIMGIGPAYAIPAALQK3	25414.3	28024	28782
Q5XIM0	Q5XIM0	Q5XIM0_RAT	Bcs1l	Mitochondrial chaperone BCS1	1	SYAWLLSWLTR	SYAWLLSWLTR	2	SYAWLLSWLTR2	3516.66		
P62912	P62912;A0A8I5Y5C9;D4A412	RL32_RAT	Rpl32	Large ribosomal subunit protein eL32	0	SYCAEIAHNVSSK	SYC(UniMod:4)AEIAHNVSSK	2	SYC(UniMod:4)AEIAHNVSSK2	4328.81	4404.34	2874.35
P62912	P62912;A0A8I5Y5C9;D4A412	RL32_RAT	Rpl32	Large ribosomal subunit protein eL32	0	SYCAEIAHNVSSK	SYC(UniMod:4)AEIAHNVSSK	3	SYC(UniMod:4)AEIAHNVSSK3	28081	20713.1	27507.9
P27605	P27605	HPRT_RAT	Hprt1	Hypoxanthine-guanine phosphoribosyltransferase	1	SYCNDQSTGDIK	SYC(UniMod:4)NDQSTGDIK	2	SYC(UniMod:4)NDQSTGDIK2	16967.1	16352.5	15839.9
Q6AY86	Q6AY86	VP26A_RAT	Vps26a	Vacuolar protein sorting-associated protein 26A	1	SYDFEFMQVEKPYESYIGANVR	SYDFEFMQVEKPYESYIGANVR	3	SYDFEFMQVEKPYESYIGANVR3	10336	3789.77	3963.13
Q62991	Q62991	SCFD1_RAT	Scfd1	Sec1 family domain-containing protein 1	1	SYDLTPVDK	SYDLTPVDK	2	SYDLTPVDK2	56260.8	56345	57376.6
A0A8I5ZUS1	A0A8I5ZUS1	A0A8I5ZUS1_RAT	Map3k4	Mitogen activated protein kinase kinase kinase 4	1	SYDNIMHVGLR	SYDNIMHVGLR	3	SYDNIMHVGLR3	3856.36	9435.57	3574.81
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	SYDPVLPPMPDDIDDEEDSVK	SYDPVLPPMPDDIDDEEDSVK	3	SYDPVLPPMPDDIDDEEDSVK3	13242.8	10219.5	14513.9
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	SYDSLPNFTAADCLR	SYDSLPNFTAADC(UniMod:4)LR	2	SYDSLPNFTAADC(UniMod:4)LR2	19658.9	25405.7	13687.6
P25113	P25113	PGAM1_RAT	Pgam1	Phosphoglycerate mutase 1	1	SYDVPPPPMEPDHPFYSNISK	SYDVPPPPMEPDHPFYSNISK	3	SYDVPPPPMEPDHPFYSNISK3	71944	67286.6	82488.4
Q01460	Q01460	DIAC_RAT	Ctbs	Di-N-acetylchitobiase	1	SYDWSQITTVAVFGK	SYDWSQITTVAVFGK	2	SYDWSQITTVAVFGK2	5420.17	4041.26	3712.66
P07340	P07340	AT1B1_RAT	Atp1b1	Sodium/potassium-transporting ATPase subunit beta-1	1	SYEAYVLNIIR	SYEAYVLNIIR	2	SYEAYVLNIIR2	5978.2	15938.5	8773.8
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	SYEDLVR	SYEDLVR	2	SYEDLVR2	13666.2	20125.3	12278.2
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	SYEFFNELYHR	SYEFFNELYHR	3	SYEFFNELYHR3		3138.43	1453.58
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	SYEFQGNHFQVTR	SYEFQGNHFQVTR	3	SYEFQGNHFQVTR3	23497.1	19814.4	18210.3
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	SYEGEEDTPMGLLLGGVK	SYEGEEDTPMGLLLGGVK	2	SYEGEEDTPMGLLLGGVK2	16651.6	14121.5	15665.8
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	SYEGTLYK	SYEGTLYK	2	SYEGTLYK2	10830.3	13688.3	24613.4
F7EKI5	F7EKI5	F7EKI5_RAT	Pcdh18	Protocadherin 18	1	SYEIDVQAQDLGPNSIPAHCK	SYEIDVQAQDLGPNSIPAHC(UniMod:4)K	3	SYEIDVQAQDLGPNSIPAHC(UniMod:4)K3	19534.8	21628.3	14728.6
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	SYEIIFR	SYEIIFR	2	SYEIIFR2	61776.4	59070.1	49242.8
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	SYEIIFREEFWR	SYEIIFREEFWR	3	SYEIIFREEFWR3	6948.5		
G3V8Z6	G3V8Z6	G3V8Z6_RAT	Krit1	KRIT1, ankyrin repeat containing	1	SYEILLHEVPIEGQK	SYEILLHEVPIEGQK	3	SYEILLHEVPIEGQK3	15220.7	16178.4	14877.4
P68136	P60711;P63259;A0A8I5Y704;D3ZRN3;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	SYELPDGQVITIGNER	SYELPDGQVITIGNER	2	SYELPDGQVITIGNER2	214819	196151	197663
P68136	P60711;P63259;A0A8I5Y704;D3ZRN3;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	SYELPDGQVITIGNER	SYELPDGQVITIGNER	3	SYELPDGQVITIGNER3	140262	138817	165170
P68136	P60711;P63259;A0A8I5Y704;D3ZRN3;P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	SYELPDGQVITIGNERFR	SYELPDGQVITIGNERFR	3	SYELPDGQVITIGNERFR3	18913.5	19756.2	26007.8
B3GNI6	B3GNI6	SEP11_RAT	Septin11	Septin-11	1	SYELQESNVR	SYELQESNVR	2	SYELQESNVR2	176318	144429	148163
Q920A6	Q920A6	RISC_RAT	Scpep1	Retinoid-inducible serine carboxypeptidase	1	SYENLAFYWILK	SYENLAFYWILK	2	SYENLAFYWILK2	3131.7	9339.67	7185.53
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	SYENQKPPFDAK	SYENQKPPFDAK	3	SYENQKPPFDAK3	45618.4	45772.6	49139.1
Q9EQS0	Q9EQS0	TALDO_RAT	Taldo1	Transaldolase	1	SYEPQEDPGVK	SYEPQEDPGVK	2	SYEPQEDPGVK2	20163	21808.9	23565.1
A0A096MK61	A0A096MK61	A0A096MK61_RAT	Crtap	Cartilage associated protein-like 1	1	SYESLFVR	SYESLFVR	2	SYESLFVR2	21171.6	20328.2	13425
Q5FVL2	Q5FVL2	EMC8_RAT	Emc8	ER membrane protein complex subunit 8	1	SYETLVDFDNHLDDIR	SYETLVDFDNHLDDIR	3	SYETLVDFDNHLDDIR3	18096.4	12014.8	12321.1
Q5FVL2	Q5FVL2	EMC8_RAT	Emc8	ER membrane protein complex subunit 8	1	SYETLVDFDNHLDDIRSDWTNPEINK	SYETLVDFDNHLDDIRSDWTNPEINK	4	SYETLVDFDNHLDDIRSDWTNPEINK4	8576.96	3126.33	2712.71
Q5XIP2	Q5XIP2	Q5XIP2_RAT	Pigk	GPI-anchor transamidase	1	SYEVTVENFLR	SYEVTVENFLR	2	SYEVTVENFLR2	4387.38	1921.44	1649.66
E9PU10	E9PU10	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	1	SYFGLDDK	SYFGLDDK	2	SYFGLDDK2	190669	168048	146452
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	SYFGLDEASLEK	SYFGLDEASLEK	2	SYFGLDEASLEK2	76942.4	73426.6	84522.8
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	SYFLIVR	SYFLIVR	2	SYFLIVR2		129848	123063
D3ZZ81	A0A8I6AK94;Q91Z80;D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	0	SYFMECLVDAR	SYFMEC(UniMod:4)LVDAR	2	SYFMEC(UniMod:4)LVDAR2	22655.1	25983.6	20735.1
A0A8I6GIL4	A0A8I6GIL4	A0A8I6GIL4_RAT	Tmem87a	Transmembrane protein 87A	1	SYFNFGK	SYFNFGK	2	SYFNFGK2	29777.9	25326.2	43003.9
P08650	P08650	CO5_RAT	C5	Complement C5	1	SYFPESWLWEVHR	SYFPESWLWEVHR	2	SYFPESWLWEVHR2	137630	104247	82843
P08650	P08650	CO5_RAT	C5	Complement C5	1	SYFPESWLWEVHR	SYFPESWLWEVHR	3	SYFPESWLWEVHR3	738943	580179	536896
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	SYFPVPIGK	SYFPVPIGK	2	SYFPVPIGK2	1.03716e+06	790480	799297
M0R3L8	M0R3L8	M0R3L8_RAT	Gba	Glucosylceramidase	1	SYFSSEGIEYNIIR	SYFSSEGIEYNIIR	2	SYFSSEGIEYNIIR2	21772	20459	24542.3
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	SYFSSFTDDIISQPMLK	SYFSSFTDDIISQPMLK	3	SYFSSFTDDIISQPMLK3	30609.3	44233	22252.6
Q5XIF3	Q5XIF3	NDUS4_RAT	Ndufs4	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial	1	SYGANFSWNK	SYGANFSWNK	2	SYGANFSWNK2	61768.5	43119.6	58404.1
A0A8I6AFV5	A0A8I6AFV5	A0A8I6AFV5_RAT	ENSRNOG00000066958	Uncharacterized protein	1	SYGFYACPGTSDER	SYGFYAC(UniMod:4)PGTSDER	2	SYGFYAC(UniMod:4)PGTSDER2	1851.38	1583.08	
P08644	Q04970;P08644	RASK_RAT	Kras	GTPase KRas	0	SYGIPFIETSAK	SYGIPFIETSAK	2	SYGIPFIETSAK2	430660	406620	356036
P20171	A0A8I6AHV4;P20171	RASH_RAT	Hras	GTPase HRas	0	SYGIPYIETSAK	SYGIPYIETSAK	2	SYGIPYIETSAK2	47832.9	37625.5	55079.2
O35217	O35217	MINP1_RAT	Minpp1	Multiple inositol polyphosphate phosphatase 1	1	SYGYAINSR	SYGYAINSR	2	SYGYAINSR2	65267.6	73892.4	67423.3
P29410	A0A8I5ZQQ9;P29410	KAD2_RAT	Ak2	Adenylate kinase 2, mitochondrial	0	SYHEEFNPPK	SYHEEFNPPK	3	SYHEEFNPPK3	144181	140348	134435
B5DEH0	Q5U2Z2;F1LMC1;B5DEH0	LIMD1_RAT	Limd1	LIM domain-containing protein 1	0	SYHPGCFR	SYHPGC(UniMod:4)FR	2	SYHPGC(UniMod:4)FR2	8614.04		2175.34
A0A8I6ANA0	A0A8I6ANA0	A0A8I6ANA0_RAT	Mfsd8	Major facilitator superfamily domain containing 8	1	SYIAGATSLQER	SYIAGATSLQER	2	SYIAGATSLQER2			5620.05
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	SYIATQGCLQNTVNDFWR	SYIATQGC(UniMod:4)LQNTVNDFWR	3	SYIATQGC(UniMod:4)LQNTVNDFWR3	17065.8	30002.4	26614
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	SYIEYQLTPTNTNR	SYIEYQLTPTNTNR	2	SYIEYQLTPTNTNR2	42440.3	41318.7	50544.7
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	SYIEYQLTPTNTNR	SYIEYQLTPTNTNR	3	SYIEYQLTPTNTNR3	2555.9	12531.3	
D3ZM03	D3ZM03	D3ZM03_RAT	Vma21	Vacuolar ATPase assembly integral membrane protein VMA21	1	SYIFEGALGMSNR	SYIFEGALGMSNR	2	SYIFEGALGMSNR2	4433.68	3497.74	5984.49
P97829	P97829	CD47_RAT	Cd47	Leukocyte surface antigen CD47	1	SYIFIYDGNK	SYIFIYDGNK	2	SYIFIYDGNK2	247304	204824	222884
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	SYIITGGLGGFGLELAR	SYIITGGLGGFGLELAR	2	SYIITGGLGGFGLELAR2	3029.66	5830.21	
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	SYILTQGPLPNTCGHFWEMVWEQK	SYILTQGPLPNTC(UniMod:4)GHFWEMVWEQK	3	SYILTQGPLPNTC(UniMod:4)GHFWEMVWEQK3	10439.5	16616.1	12543.1
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	SYIQLELVLGTLACGQTQEIR	SYIQLELVLGTLAC(UniMod:4)GQTQEIR	3	SYIQLELVLGTLAC(UniMod:4)GQTQEIR3	50389.1	29627.5	31740.8
F1MAF8	F1MAF8	F1MAF8_RAT	Atg2b	Autophagy related 2B	1	SYISPHSSPSQTPTR	SYISPHSSPSQTPTR	3	SYISPHSSPSQTPTR3	3310.58	5743.41	7279.83
P14046	Q6IE52;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	SYIYLDTEAGVLPCNQIHTVQAHFILK	SYIYLDTEAGVLPC(UniMod:4)NQIHTVQAHFILK	4	SYIYLDTEAGVLPC(UniMod:4)NQIHTVQAHFILK4	949286	698432	613784
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	SYIYSGSHDGHINYWDSETGENDSFSGK	SYIYSGSHDGHINYWDSETGENDSFSGK	4	SYIYSGSHDGHINYWDSETGENDSFSGK4	74938.2	78626.1	71596.9
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	SYKMADEAASEAHQEGDTR	SYKMADEAASEAHQEGDTR	3	SYKMADEAASEAHQEGDTR3	4810.43		4089.96
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	SYKMADEAASEAHQEGDTR	SYKMADEAASEAHQEGDTR	4	SYKMADEAASEAHQEGDTR4	7094.23	12388.5	19109.5
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	SYKPVYWSPSSR	SYKPVYWSPSSR	2	SYKPVYWSPSSR2	5761.78	5966.86	5329.13
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	SYKPVYWSPSSR	SYKPVYWSPSSR	3	SYKPVYWSPSSR3	22576.7	18946.7	31000
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	SYLAQFAAR	SYLAQFAAR	2	SYLAQFAAR2	91668.1	97055.1	88326.6
A0A8J8YNR6	A0A8J8YNR6	A0A8J8YNR6_RAT	Fxr2	FMR1 autosomal homolog 2	1	SYLEFSEDSVQVPR	SYLEFSEDSVQVPR	2	SYLEFSEDSVQVPR2	3176.55	3934.36	962.097
B2ZDP9	B2ZDP9	B2ZDP9_RAT	Orai2	Calcium release-activated calcium modulator 2 protein	1	SYLELVTSNHHSVQALSWR	SYLELVTSNHHSVQALSWR	3	SYLELVTSNHHSVQALSWR3	12490.8	10482.5	13590.7
B2ZDP9	B2ZDP9	B2ZDP9_RAT	Orai2	Calcium release-activated calcium modulator 2 protein	1	SYLELVTSNHHSVQALSWR	SYLELVTSNHHSVQALSWR	4	SYLELVTSNHHSVQALSWR4	15731	10637.7	16822.6
B2GV15	B2GV15	B2GV15_RAT	Dbt	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	SYLENPAFMLLDLK	SYLENPAFMLLDLK	2	SYLENPAFMLLDLK2	4623.53	5898.33	1623.67
Q09137	Q09137	AAPK2_RAT	Prkaa2	5'-AMP-activated protein kinase catalytic subunit alpha-2	1	SYLLDFK	SYLLDFK	2	SYLLDFK2	26862	28093.4	11812.9
P0C0A2	P0C0A2	VPS36_RAT	Vps36	Vacuolar protein-sorting-associated protein 36	1	SYLLSMGIANPVTR	SYLLSMGIANPVTR	2	SYLLSMGIANPVTR2	7166.6	7127.52	5875.32
Q9QXT4	Q9QXT4	CMLO1_RAT	Cml1	Probable N-acetyltransferase CML1	1	SYLNAHGSFWVAESGNQVVGIVAALPVK	SYLNAHGSFWVAESGNQVVGIVAALPVK	4	SYLNAHGSFWVAESGNQVVGIVAALPVK4	19349.1	9942.16	124621
P14882	P14882	PCCA_RAT	Pcca	Propionyl-CoA carboxylase alpha chain, mitochondrial	1	SYLNMDAIMEAIKK	SYLNMDAIMEAIKK	3	SYLNMDAIMEAIKK3	12328.1	6809.82	10646.1
G3V762	G3V762	G3V762_RAT	Gfus	GDP-L-fucose synthase	1	SYLPDFCFTPFK	SYLPDFC(UniMod:4)FTPFK	2	SYLPDFC(UniMod:4)FTPFK2	28594.5	30602.1	35363.6
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	SYLPGAGDESIELCRPLDSR	SYLPGAGDESIELC(UniMod:4)RPLDSR	3	SYLPGAGDESIELC(UniMod:4)RPLDSR3	64093.1	64875.5	66141.9
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	SYLQDPIWR	SYLQDPIWR	2	SYLQDPIWR2	41129.2	44086.4	39175.6
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	SYLQSMGYSAR	SYLQSMGYSAR	2	SYLQSMGYSAR2	2.16009e+06	2.75818e+06	2.46504e+06
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	SYLQSMGYSAR	SYLQSMGYSAR	3	SYLQSMGYSAR3	11469.6	17372.6	11206.5
A0A0G2K089	A0A0G2K089	A0A0G2K089_RAT	Dennd4c	DENN domain containing 4C	1	SYLRPITEAPSNK	SYLRPITEAPSNK	3	SYLRPITEAPSNK3	17838.9	23431.1	8524.04
P50282	P50282	MMP9_RAT	Mmp9	Matrix metalloproteinase-9	1	SYLSCTTDGR	SYLSC(UniMod:4)TTDGR	2	SYLSC(UniMod:4)TTDGR2	6114.5	10069.9	5816.07
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	SYLSGMPECK	SYLSGMPEC(UniMod:4)K	2	SYLSGMPEC(UniMod:4)K2	50648	51619	46951.9
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	SYLSMVGSCCTSAK	SYLSMVGSC(UniMod:4)C(UniMod:4)TSAK	2	SYLSMVGSC(UniMod:4)C(UniMod:4)TSAK2	437034	263545	244553
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	SYLSMVGSCCTSAK	SYLSMVGSC(UniMod:4)C(UniMod:4)TSAK	3	SYLSMVGSC(UniMod:4)C(UniMod:4)TSAK3	6816.3	6110.44	5019.24
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	SYLSMVGSCCTSAKPTVCFLK	SYLSMVGSC(UniMod:4)C(UniMod:4)TSAKPTVC(UniMod:4)FLK	3	SYLSMVGSC(UniMod:4)C(UniMod:4)TSAKPTVC(UniMod:4)FLK3	2.0106e+06	1.55611e+06	1.60124e+06
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	SYLSMVGSCCTSAKPTVCFLK	SYLSMVGSC(UniMod:4)C(UniMod:4)TSAKPTVC(UniMod:4)FLK	4	SYLSMVGSC(UniMod:4)C(UniMod:4)TSAKPTVC(UniMod:4)FLK4	18927.9	7947.88	11772.7
B5DEH0	B5DEH0	LIMD1_RAT	Limd1	LIM domain-containing protein 1	1	SYLSVSAPLSSTTSK	SYLSVSAPLSSTTSK	2	SYLSVSAPLSSTTSK2	16323.1	8765.09	14530
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	SYLTEQVNQDLPK	SYLTEQVNQDLPK	2	SYLTEQVNQDLPK2	72462.9	45485.6	71954.2
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	SYLTPVRDEESESQR	SYLTPVRDEESESQR	3	SYLTPVRDEESESQR3	156229	165311	171400
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	SYLTPVRDEESESQRK	SYLTPVRDEESESQRK	3	SYLTPVRDEESESQRK3	19507.3	28171.2	26088.3
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	SYLTPVRDEESESQRK	SYLTPVRDEESESQRK	4	SYLTPVRDEESESQRK4	50850.9	50586.1	77493.6
B4F785	B4F785	EGFLA_RAT	Egflam	Pikachurin	1	SYLTYDNPNILK	SYLTYDNPNILK	2	SYLTYDNPNILK2	645.544	5240.27	3023.89
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	SYLVDNDGEIYDDIADGCIYDND	SYLVDNDGEIYDDIADGC(UniMod:4)IYDND	3	SYLVDNDGEIYDDIADGC(UniMod:4)IYDND3	5985.08	6498.57	3867.46
A0A8I5ZTQ0	A0A8I5ZTQ0	A0A8I5ZTQ0_RAT	Mydgf	Myeloid-derived growth factor	1	SYLYFTQFK	SYLYFTQFK	2	SYLYFTQFK2	23574.4	16625.1	25144.7
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	SYMEDAPLLR	SYMEDAPLLR	2	SYMEDAPLLR2	4723.4	1666.05	5642.2
M0R915	M0R915;A0A8I6GLQ4	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	0	SYMQYLFLK	SYMQYLFLK	2	SYMQYLFLK2	19629	25602.2	14328.1
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	SYNCTPVSSPR	SYNC(UniMod:4)TPVSSPR	2	SYNC(UniMod:4)TPVSSPR2	7863.18	962.252	4904.77
A0A8I5ZJ62	A0A8I5ZJ62	A0A8I5ZJ62_RAT	Glipr2	GLI pathogenesis-related 2	1	SYNFQQPGFTSGTGHFTAMVWK	SYNFQQPGFTSGTGHFTAMVWK	3	SYNFQQPGFTSGTGHFTAMVWK3	119440	115433	143114
Q9Z2P6	Q9Z2P6	SNP29_RAT	Snap29	Synaptosomal-associated protein 29	1	SYNPFDDDVEDEDTRPAPWK	SYNPFDDDVEDEDTRPAPWK	3	SYNPFDDDVEDEDTRPAPWK3	107874	120673	121287
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SYNRPTLR	SYNRPTLR	2	SYNRPTLR2	184233	189836	165113
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SYNRPTLRLELLGCEVNGCSTPLGLEDGR	SYNRPTLRLELLGC(UniMod:4)EVNGC(UniMod:4)STPLGLEDGR	4	SYNRPTLRLELLGC(UniMod:4)EVNGC(UniMod:4)STPLGLEDGR4	9987.57	5528.53	5399.56
A0A8I5ZLW9	A0A8I5ZLW9	A0A8I5ZLW9_RAT	ENSRNOG00000063672	Ig-like domain-containing protein	1	SYNYATYYADSVK	SYNYATYYADSVK	2	SYNYATYYADSVK2	41236	20404.9	37627.7
A0A8I5ZLW9	A0A8I5ZLW9	A0A8I5ZLW9_RAT	ENSRNOG00000063672	Ig-like domain-containing protein	1	SYNYATYYADSVKDR	SYNYATYYADSVKDR	3	SYNYATYYADSVKDR3	20509.6	12862.5	21947.7
Q4G069	Q4G069	RMD1_RAT	Rmdn1	Regulator of microtubule dynamics protein 1	1	SYPAHTEEDK	SYPAHTEEDK	2	SYPAHTEEDK2			9937.16
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	SYPGHVQPATAR	SYPGHVQPATAR	3	SYPGHVQPATAR3	24342.8	29620.3	45352.6
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	SYPGLLIVPQSIQDNALQR	SYPGLLIVPQSIQDNALQR	3	SYPGLLIVPQSIQDNALQR3	8144.56	8746.13	6665.38
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	SYPHEVQFFDLR	SYPHEVQFFDLR	3	SYPHEVQFFDLR3	16585.3	13358.5	15089.2
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	SYPVTQPEK	SYPVTQPEK	2	SYPVTQPEK2	81874.2	82050.1	68747.7
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	SYPYLFK	SYPYLFK	2	SYPYLFK2	5174.33	6098.21	
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	SYQAEHGPDFPWSVGEDMSVDGR	SYQAEHGPDFPWSVGEDMSVDGR	3	SYQAEHGPDFPWSVGEDMSVDGR3	49942.2	49604.8	43311.7
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	SYQAEHGPDFPWSVGEDMSVDGRR	SYQAEHGPDFPWSVGEDMSVDGRR	4	SYQAEHGPDFPWSVGEDMSVDGRR4	10580.5		8610.12
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	SYQASPDLR	SYQASPDLR	2	SYQASPDLR2	114485	114981	132459
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	SYQDPSNAQFLESIR	SYQDPSNAQFLESIR	2	SYQDPSNAQFLESIR2	69665.8	73280.3	69878.3
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	SYQDPSNAQFLESIR	SYQDPSNAQFLESIR	3	SYQDPSNAQFLESIR3			17783.1
Q8K1Q0	Q8K1Q0	NMT1_RAT	Nmt1	Glycylpeptide N-tetradecanoyltransferase 1	1	SYQFWDTQPVPK	SYQFWDTQPVPK	2	SYQFWDTQPVPK2	3477.57	5848.74	
Q5RK08	Q5RK08	Q5RK08_RAT	Nipsnap2	Glioblastoma amplified sequence	1	SYQLRPGTMIEWGNYWAR	SYQLRPGTMIEWGNYWAR	3	SYQLRPGTMIEWGNYWAR3	52540.2	40798	39471.8
M0RBQ8	M0RBQ8	M0RBQ8_RAT	Dennd1c	DENN/MADD domain containing 1C	1	SYQLWADSLKK	SYQLWADSLKK	3	SYQLWADSLKK3		1003.04	1536.04
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	SYQMPVRDEESESQR	SYQMPVRDEESESQR	3	SYQMPVRDEESESQR3	63058.1	38564	51360
P50298	P50298	ARY2_RAT	Nat2	Arylamine N-acetyltransferase 2	1	SYQMWEPLELTSGK	SYQMWEPLELTSGK	2	SYQMWEPLELTSGK2			4746.36
D3Z8F6	D3Z8F6	D3Z8F6_RAT	Dennd1b	DENN domain containing 1B	1	SYQQWVYTVK	SYQQWVYTVK	2	SYQQWVYTVK2	9562.99	7446.1	6665.59
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	SYQVPMLAQLSVFR	SYQVPMLAQLSVFR	2	SYQVPMLAQLSVFR2	279240	277188	287930
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	SYQVPMLAQLSVFR	SYQVPMLAQLSVFR	3	SYQVPMLAQLSVFR3	16724.9	12445.6	9386.16
Q4G064	Q4G064	COQ5_RAT	Coq5	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial	1	SYQYLVESIR	SYQYLVESIR	2	SYQYLVESIR2	3059.75	5589	3771.8
D4A0Z1	D4A0Z1	D4A0Z1_RAT	Tspan14	Tetraspanin	1	SYRDDIDLQNLIDSLQK	SYRDDIDLQNLIDSLQK	3	SYRDDIDLQNLIDSLQK3	93022	38029.1	47082.9
D3ZSG2	D3ZSG2	D3ZSG2_RAT	Trank1	Tetratricopeptide repeat and ankyrin repeat containing 1	1	SYRFALK	SYRFALK	2	SYRFALK2	4.09808e+06	3.28056e+06	2.76433e+06
A0A0G2K6R0	A0A0G2K6R0	A0A0G2K6R0_RAT	Tnrc6b	Trinucleotide repeat containing adaptor 6B	1	SYRPAHPDCQAVLQTLLSR	SYRPAHPDC(UniMod:4)QAVLQTLLSR	4	SYRPAHPDC(UniMod:4)QAVLQTLLSR4	13656	8987.36	5156.41
D3ZHZ3	D3ZHZ3	D3ZHZ3_RAT	Osbpl3	Oxysterol-binding protein	1	SYSDGSEASSEFSK	SYSDGSEASSEFSK	2	SYSDGSEASSEFSK2	5233.42	8716.58	4090.72
Q794E4	Q794E4;A0A8I5ZW75	HNRPF_RAT	Hnrnpf	Heterogeneous nuclear ribonucleoprotein F	0	SYSDPPLK	SYSDPPLK	2	SYSDPPLK2	26460	63363.6	107905
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	SYSFPKPGHK	SYSFPKPGHK	3	SYSFPKPGHK3	23719.2	25629.3	17591.7
F1LU27	F1LU27	F1LU27_RAT	Focad	Focadhesin	1	SYSGENTASAIAR	SYSGENTASAIAR	2	SYSGENTASAIAR2	5913.02	6786.04	3628.9
B0BNE5	B0BNE5	ESTD_RAT	Esd	S-formylglutathione hydrolase	1	SYSGPQIDILIDQGK	SYSGPQIDILIDQGK	2	SYSGPQIDILIDQGK2	12788.4	7398.5	8847.31
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SYSILYSDQGVSWK	SYSILYSDQGVSWK	2	SYSILYSDQGVSWK2	426751	436157	353422
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SYSILYSDQGVSWK	SYSILYSDQGVSWK	3	SYSILYSDQGVSWK3	9753.75	11280.6	7193.67
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SYSILYSDQGVSWKPYR	SYSILYSDQGVSWKPYR	3	SYSILYSDQGVSWKPYR3	8.93012e+06	32460.6	20438.8
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	SYSILYSDQGVSWKPYR	SYSILYSDQGVSWKPYR	4	SYSILYSDQGVSWKPYR4	20027.6	34413	20853.9
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	SYSLVVAK	SYSLVVAK	2	SYSLVVAK2	16610.8	20164.4	30009.8
Q561Q9	Q561Q9	Q561Q9_RAT	Ctsw	Cathepsin W	1	SYSNPAEYTR	SYSNPAEYTR	2	SYSNPAEYTR2	104644	96912.7	117042
A0A8I5ZZ89	A0A8I5ZZ89	A0A8I5ZZ89_RAT	Elp3	Elongator complex protein 3	1	SYSPSDLIELVAR	SYSPSDLIELVAR	2	SYSPSDLIELVAR2	3947.5	10616.9	7417.03
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	SYSPTLFAQTVR	SYSPTLFAQTVR	2	SYSPTLFAQTVR2	66633.3	64587	81529.4
Q07936	Q07936	ANXA2_RAT	Anxa2	Annexin A2	1	SYSPYDMLESIR	SYSPYDMLESIR	2	SYSPYDMLESIR2	20478.5	16956.9	
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	SYSPYDYQLHPAASNQSFRPK	SYSPYDYQLHPAASNQSFRPK	4	SYSPYDYQLHPAASNQSFRPK4	5479.61	6292.56	5228.46
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	SYSSAVQK	SYSSAVQK	2	SYSSAVQK2	74336.6	68531.4	84068.2
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	SYSSGGEDGYVR	SYSSGGEDGYVR	2	SYSSGGEDGYVR2	69881.5	80524	63978.6
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	SYSVSSSILHGIEPWLK	SYSVSSSILHGIEPWLK	3	SYSVSSSILHGIEPWLK3	30175.7	38039.9	19092.8
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	SYSVVASEYDK	SYSVVASEYDK	2	SYSVVASEYDK2	13737.4	15643.9	14267.2
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	SYTAAEATLK	SYTAAEATLK	2	SYTAAEATLK2	40741.3	52680	47258.2
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	SYTAAESR	SYTAAESR	2	SYTAAESR2	14099.4		22582.8
Q5U2X1	Q5U2X1	FBX9_RAT	Fbxo9	F-box only protein 9	1	SYTAFSERPL	SYTAFSERPL	2	SYTAFSERPL2	5538.51	3385.65	4698.99
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	SYTEDWAIVVR	SYTEDWAIVVR	2	SYTEDWAIVVR2	33422.2	21436.7	25630.6
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	SYTFLISSDYER	SYTFLISSDYER	2	SYTFLISSDYER2	9539.2	8336.97	12209.8
Q0Z843	Q0Z843	Q0Z843_RAT	Fig4	FIG4 phosphoinositide 5-phosphatase	1	SYTHWWTPEVVK	SYTHWWTPEVVK	3	SYTHWWTPEVVK3	4981.59	7717.87	6564.01
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	SYTITGLQPGTDYK	SYTITGLQPGTDYK	2	SYTITGLQPGTDYK2	243390	278475	268465
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	SYTITGLQPGTDYK	SYTITGLQPGTDYK	3	SYTITGLQPGTDYK3	3.10497e+06	3.11117e+06	3.25376e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	SYTITGLQPGTDYKIHLYTLNDNAR	SYTITGLQPGTDYKIHLYTLNDNAR	3	SYTITGLQPGTDYKIHLYTLNDNAR3	28509.9	18742.8	17982.1
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	SYTITGLQPGTDYKIHLYTLNDNAR	SYTITGLQPGTDYKIHLYTLNDNAR	4	SYTITGLQPGTDYKIHLYTLNDNAR4	69863.1	76781.2	66488.7
A0A8I5ZN89	A0A8I5ZN89	A0A8I5ZN89_RAT	Gcdh	Glutaryl-CoA dehydrogenase	1	SYTLSGTK	SYTLSGTK	2	SYTLSGTK2	21473	17093.4	15694.7
O88658	O88658;F1M4A4	KIF1B_RAT	Kif1b	Kinesin-like protein KIF1B	0	SYTMMGK	SYTMMGK	2	SYTMMGK2	7791.96	8857.11	8339.01
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	SYTMMGTADQPGLIPR	SYTMMGTADQPGLIPR	2	SYTMMGTADQPGLIPR2	12614.4	12385.7	19024.9
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	SYTMMGTADQPGLIPR	SYTMMGTADQPGLIPR	3	SYTMMGTADQPGLIPR3	4045.64	7872.63	2522.82
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	SYTPLHAAASSGMISVVK	SYTPLHAAASSGMISVVK	3	SYTPLHAAASSGMISVVK3	16107.7	10447.9	16547.6
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	SYTSDLQK	SYTSDLQK	2	SYTSDLQK2	15640.8	9343.53	4336.11
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	SYTTAGEAEESSK	SYTTAGEAEESSK	2	SYTTAGEAEESSK2	51848	43318.1	42610.9
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	SYVADKDVASAK	SYVADKDVASAK	2	SYVADKDVASAK2	1540.76		
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	SYVADKDVASAK	SYVADKDVASAK	3	SYVADKDVASAK3	32554.1	20831.3	26891.7
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	SYVCFCPLDFEGR	SYVC(UniMod:4)FC(UniMod:4)PLDFEGR	2	SYVC(UniMod:4)FC(UniMod:4)PLDFEGR2	435721	475861	401484
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	SYVCFCPLDFEGR	SYVC(UniMod:4)FC(UniMod:4)PLDFEGR	3	SYVC(UniMod:4)FC(UniMod:4)PLDFEGR3	3923.7	2422.45	1620.35
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	SYVDLLK	SYVDLLK	2	SYVDLLK2	47370.9	43369.1	30798
P30427	P30427	PLEC_RAT	Plec	Plectin	1	SYVDPSTDER	SYVDPSTDER	2	SYVDPSTDER2	7576.37	10668.8	4093.68
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	SYVESVAR	SYVESVAR	2	SYVESVAR2	57412.1	48023.5	58980
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	SYVGTNLK	SYVGTNLK	2	SYVGTNLK2	36536.4	44582.6	36407.3
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	SYVITGSWNPK	SYVITGSWNPK	2	SYVITGSWNPK2	109184	140886	131924
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	SYVNPTELR	SYVNPTELR	2	SYVNPTELR2	20523.2	20047	24965.2
Q6VBQ5	Q6VBQ5	MYADM_RAT	Myadm	Myeloid-associated differentiation marker	1	SYVQPNEVCNWDR	SYVQPNEVC(UniMod:4)NWDR	2	SYVQPNEVC(UniMod:4)NWDR2	165703	143584	180383
Q6VBQ5	Q6VBQ5	MYADM_RAT	Myadm	Myeloid-associated differentiation marker	1	SYVQPNEVCNWDRR	SYVQPNEVC(UniMod:4)NWDRR	3	SYVQPNEVC(UniMod:4)NWDRR3	341732	387048	330827
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	SYVQSFFGCR	SYVQSFFGC(UniMod:4)R	2	SYVQSFFGC(UniMod:4)R2	19789.8	15228.8	38242.7
Q6AYR4	Q6AYR4	TOR2A_RAT	Tor2a	Torsin-2A	1	SYVSSLLAQYLFR	SYVSSLLAQYLFR	3	SYVSSLLAQYLFR3	3515.19		
A0A8I5ZQ72	A0A8I5ZQ72	A0A8I5ZQ72_RAT	Zc3h12c	Zinc finger CCCH type containing 12C	1	SYVSSPDPQLEENLK	SYVSSPDPQLEENLK	2	SYVSSPDPQLEENLK2	6546.47	6387.1	3135.44
D4A4T9	D4A4T9	CHRD1_RAT	Chordc1	Cysteine and histidine-rich domain-containing protein 1	1	SYVTMTATK	SYVTMTATK	2	SYVTMTATK2	14228.2	18170.4	11171.6
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	SYVVAGSTGSPSVSYYK	SYVVAGSTGSPSVSYYK	2	SYVVAGSTGSPSVSYYK2	3966.64	5422.01	3708.84
P10888	P10888	COX41_RAT	Cox4i1	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial	1	SYVYGPIPHTFDR	SYVYGPIPHTFDR	3	SYVYGPIPHTFDR3	6973.45	1679.56	8670.35
P10888	P10888	COX41_RAT	Cox4i1	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial	1	SYVYGPIPHTFDRDWVAMQTK	SYVYGPIPHTFDRDWVAMQTK	3	SYVYGPIPHTFDRDWVAMQTK3	7739.57	9918.65	4272.14
P10888	P10888	COX41_RAT	Cox4i1	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial	1	SYVYGPIPHTFDRDWVAMQTK	SYVYGPIPHTFDRDWVAMQTK	4	SYVYGPIPHTFDRDWVAMQTK4	27870.7	30937.4	28952.5
Q6AYS6	Q6AYS6	SNX17_RAT	Snx17	Sorting nexin-17	1	SYWDSAYDDDVMENR	SYWDSAYDDDVMENR	2	SYWDSAYDDDVMENR2		1887.93	
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	SYWLDNFAK	SYWLDNFAK	2	SYWLDNFAK2	129375	110098	102749
D3ZUP8	D3ZUP8	D3ZUP8_RAT	Lmbrd2	LMBR1 domain containing 2	1	SYWNGAKRGYLLMK	SYWNGAKRGYLLMK	2	SYWNGAKRGYLLMK2		4565.08	
Q71RP1	Q71RP1	HPSE_RAT	Hpse	Heparanase	1	SYWQSQDNNDICGSER	SYWQSQDNNDIC(UniMod:4)GSER	2	SYWQSQDNNDIC(UniMod:4)GSER2	3845.81	2117.3	2383.21
Q71RP1	Q71RP1	HPSE_RAT	Hpse	Heparanase	1	SYWQSQDNNDICGSER	SYWQSQDNNDIC(UniMod:4)GSER	3	SYWQSQDNNDIC(UniMod:4)GSER3	6076.71	5413.57	4774.54
D3ZXI3	D3ZXI3	D3ZXI3_RAT	Notum	NOTUM, palmitoleoyl-protein carboxylesterase	1	SYWTDVQVK	SYWTDVQVK	2	SYWTDVQVK2	13348.6	11428.3	11368.1
Q6AYD0	Q6AYD0	Q6AYD0_RAT	Lrrc17	Leucine rich repeat containing 17	1	SYYEECPKDK	SYYEEC(UniMod:4)PKDK	2	SYYEEC(UniMod:4)PKDK2	478.109		1258.18
Q3B7U1	Q3B7U1	Q3B7U1_RAT	Maged2	MAGE family member D2	1	SYYETSK	SYYETSK	2	SYYETSK2	57491.1	53090.5	66344.3
Q02445	Q02445	TFPI1_RAT	Tfpi	Tissue factor pathway inhibitor	1	SYYFNMNSHQCEEFIYGGCR	SYYFNMNSHQC(UniMod:4)EEFIYGGC(UniMod:4)R	3	SYYFNMNSHQC(UniMod:4)EEFIYGGC(UniMod:4)R3	99713.8	99892.4	92164.8
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	SYYFPMSIDK	SYYFPMSIDK	2	SYYFPMSIDK2	42729.9	53194.6	44786.8
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	SYYFPMSIDKK	SYYFPMSIDKK	3	SYYFPMSIDKK3	22825	21694.3	29978.6
O55043	O55043	ARHG7_RAT	Arhgef7	Rho guanine nucleotide exchange factor 7	1	SYYNVVLQNILETEHEYSK	SYYNVVLQNILETEHEYSK	3	SYYNVVLQNILETEHEYSK3	4673.96	15087.8	14592.4
B5DEI0	B5DEI0	B5DEI0_RAT	Pcyox1l	Pcyox1l protein	1	SYYSVQTAEWQAHPLYGSR	SYYSVQTAEWQAHPLYGSR	3	SYYSVQTAEWQAHPLYGSR3	18314.2	25658.5	32484.7
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	SYYVDHNSK	SYYVDHNSK	2	SYYVDHNSK2	142989	164069	136088
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	SYYYAISDFAVGGR	SYYYAISDFAVGGR	2	SYYYAISDFAVGGR2	91405	93102.8	86733
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	SYYYAISDFAVGGR	SYYYAISDFAVGGR	3	SYYYAISDFAVGGR3	9174.32	12000	11473.7
Q63769	Q63769	SRPX_RAT	Srpx	Sushi repeat-containing protein SRPX	1	TAAALLDQFYEK	TAAALLDQFYEK	2	TAAALLDQFYEK2	5256.36	4564.48	5206.08
A0A8J8YHW4	A0A8J8YHW4	A0A8J8YHW4_RAT	Clk2	Secretory carrier-associated membrane protein	1	TAAANAAAGAAENAFR	TAAANAAAGAAENAFR	2	TAAANAAAGAAENAFR2	139465	114898	114072
A0A8J8YHW4	A0A8J8YHW4	A0A8J8YHW4_RAT	Clk2	Secretory carrier-associated membrane protein	1	TAAANAAAGAAENAFR	TAAANAAAGAAENAFR	3	TAAANAAAGAAENAFR3	44364.1	40838	43705.7
F1M7Q7	F1M7Q7	F1M7Q7_RAT	Otud4	ubiquitinyl hydrolase 1	1	TAADVLSSGANSVDR	TAADVLSSGANSVDR	2	TAADVLSSGANSVDR2	7838.32	3576.73	5471.09
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	TAAEEALR	TAAEEALR	2	TAAEEALR2	452548	477560	496379
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	TAAENAEK	TAAENAEK	1	TAAENAEK1			1370.74
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	TAAENAEK	TAAENAEK	2	TAAENAEK2			8082.41
Q4FZU2	A0A8I5ZMI8;A0A8I6G380;Q4FZU2	K2C6A_RAT	Krt6a	Keratin, type II cytoskeletal 6A	0	TAAENEFVTLK	TAAENEFVTLK	2	TAAENEFVTLK2	25848.1	10718.7	10071.3
Q4FZU2	A0A8I5ZMI8;A0A8I6G380;Q4FZU2	K2C6A_RAT	Krt6a	Keratin, type II cytoskeletal 6A	0	TAAENEFVTLKK	TAAENEFVTLKK	3	TAAENEFVTLKK3	5005.46	3044.37	2954.12
Q6IG04	A0A0G2JVA8;Q6IG04	K2C72_RAT	Krt72	Keratin, type II cytoskeletal 72	0	TAAENEFVVLK	TAAENEFVVLK	2	TAAENEFVVLK2		11228.1	
Q66H63	Q66H63	GDAP2_RAT	Gdap2	Ganglioside-induced differentiation-associated-protein 2	1	TAAESSLYSCYR	TAAESSLYSC(UniMod:4)YR	2	TAAESSLYSC(UniMod:4)YR2	9826.55	9420.68	4289.37
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	TAAEVAGQFIIK	TAAEVAGQFIIK	2	TAAEVAGQFIIK2	2641.84	6163.04	
D4ADE8	D4ADE8	D4ADE8_RAT	Ddx3x	RNA helicase	1	TAAFLLPILSQIYADGPGEALR	TAAFLLPILSQIYADGPGEALR	3	TAAFLLPILSQIYADGPGEALR3		2629.59	4929.44
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	TAAFTDAR	TAAFTDAR	2	TAAFTDAR2	151519	141407	112665
P51111	P51111	HD_RAT	Htt	Huntingtin	1	TAAGSAVSICQHSR	TAAGSAVSIC(UniMod:4)QHSR	2	TAAGSAVSIC(UniMod:4)QHSR2	5677.38		
P51111	P51111	HD_RAT	Htt	Huntingtin	1	TAAGSAVSICQHSR	TAAGSAVSIC(UniMod:4)QHSR	3	TAAGSAVSIC(UniMod:4)QHSR3	28976.5	35267.4	34204.8
A0A8I6GJC5	A0A8I6GJC5	A0A8I6GJC5_RAT	Reps1	RALBP1 associated Eps domain containing 1	1	TAAGVPANVSK	TAAGVPANVSK	2	TAAGVPANVSK2	55934.2	54964.7	56482.3
Q66HC1	Q66HC1	TDRD3_RAT	Tdrd3	Tudor domain-containing protein 3	1	TAAIAEVAK	TAAIAEVAK	2	TAAIAEVAK2	11145.9	7116.51	10909.4
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	TAAIANSMNYLTK	TAAIANSMNYLTK	2	TAAIANSMNYLTK2	131279	119861	95645.7
Q6AY41	D3Z9E9;Q6AY41	CC50A_RAT	Tmem30a	Cell cycle control protein 50A	0	TAALPTFR	TAALPTFR	2	TAALPTFR2	701396	662178	694934
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	TAALVLHGQK	TAALVLHGQK	2	TAALVLHGQK2	14669.9	12349.3	11252.2
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	TAAMMSSADSFSK	TAAMMSSADSFSK	2	TAAMMSSADSFSK2	31179.1	28522.3	22647.6
A0A8I6AAA9	A0A8I6AAA9	A0A8I6AAA9_RAT	Lrch1	Leucine rich repeats and calponin homology domain containing 1	1	TAAPGHDLSDTVQADLSK	TAAPGHDLSDTVQADLSK	3	TAAPGHDLSDTVQADLSK3	44297.9	43667.5	51538.6
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	TAAQGSGVLYQEPQLDDATLR	TAAQGSGVLYQEPQLDDATLR	3	TAAQGSGVLYQEPQLDDATLR3	17846.4	38424.5	12510.2
B0BMV4	B0BMV4	B0BMV4_RAT	Yif1a	Protein YIF1	1	TAASGPDSMGGPTPR	TAASGPDSMGGPTPR	2	TAASGPDSMGGPTPR2	8764.57	8969.91	9507.72
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	TAASINGAEVEVQSWLR	TAASINGAEVEVQSWLR	2	TAASINGAEVEVQSWLR2	6262.59	10382.4	7784.68
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	TAASINGAEVEVQSWLR	TAASINGAEVEVQSWLR	3	TAASINGAEVEVQSWLR3	10554.4	7935.68	11673.4
F1LT49	F1LT49	F1LT49_RAT	Lrrc47	Leucine rich repeat containing 47	1	TAATIATHDLQAVR	TAATIATHDLQAVR	3	TAATIATHDLQAVR3	22428	18380.8	24761.8
P62944	P52303;P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	TAAVCVAK	TAAVC(UniMod:4)VAK	2	TAAVC(UniMod:4)VAK2	152991	146042	168361
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	TAAVLLQNDPNPDVLSK	TAAVLLQNDPNPDVLSK	2	TAAVLLQNDPNPDVLSK2	6671.4	2335.95	
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	TAAVLPPSPLQSLPGSLILDCSSGK	TAAVLPPSPLQSLPGSLILDC(UniMod:4)SSGK	3	TAAVLPPSPLQSLPGSLILDC(UniMod:4)SSGK3	16520.7	21043.4	18037.5
A0A0G2JXD9	A0A0G2JXD9	A0A0G2JXD9_RAT	Dop1b	DOP1 leucine zipper like protein B	1	TAAVSDPINLR	TAAVSDPINLR	2	TAAVSDPINLR2	15061.4	20748.7	31192.3
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	TAAWEHAGGNR	TAAWEHAGGNR	3	TAAWEHAGGNR3	16064.4	17912.5	24881.5
P18298	P18298;A0A8I6G8F2	METK2_RAT	Mat2a	S-adenosylmethionine synthase isoform type-2	0	TAAYGHFGR	TAAYGHFGR	2	TAAYGHFGR2	6353.02	4050.29	6289.32
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	TAAYVNAIEK	TAAYVNAIEK	2	TAAYVNAIEK2	117138	110220	131496
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	TACGECTSSSSECMWCSNMK	TAC(UniMod:4)GEC(UniMod:4)TSSSSEC(UniMod:4)MWC(UniMod:4)SNMK	3	TAC(UniMod:4)GEC(UniMod:4)TSSSSEC(UniMod:4)MWC(UniMod:4)SNMK3	3365.66	1189.93	5120.97
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	TACGVGEFR	TAC(UniMod:4)GVGEFR	2	TAC(UniMod:4)GVGEFR2	453690	539525	435798
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	TACISLLQK	TAC(UniMod:4)ISLLQK	2	TAC(UniMod:4)ISLLQK2	28902.8	37502.7	37849.4
Q3B7V5	Q3B7V5	Q3B7V5_RAT	Rab2b	RAB2B, member RAS oncogene family	1	TACNVEEAYINTAK	TAC(UniMod:4)NVEEAYINTAK	2	TAC(UniMod:4)NVEEAYINTAK2	8223.25	5862.2	4569.77
Q3B7V5	Q3B7V5	Q3B7V5_RAT	Rab2b	RAB2B, member RAS oncogene family	1	TACNVEEAYINTAK	TAC(UniMod:4)NVEEAYINTAK	3	TAC(UniMod:4)NVEEAYINTAK3	4540.87		
Q641Y0	Q641Y0	OST48_RAT	Ddost	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit	1	TADDPSLSLIK	TADDPSLSLIK	2	TADDPSLSLIK2	304325	351268	357836
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	TADELVFFVNGK	TADELVFFVNGK	2	TADELVFFVNGK2	23173.6	21576.1	27592.4
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	TADGIVSHLK	TADGIVSHLK	2	TADGIVSHLK2	104723	93980.2	75964.8
F7FMS0	F7FMS0	F7FMS0_RAT	Mst1	Macrophage stimulating 1	1	TADGLPCQAWSR	TADGLPC(UniMod:4)QAWSR	2	TADGLPC(UniMod:4)QAWSR2	43973.4	28708.9	35416.1
A0A8I5YCC9	A0A8I5YCC9	A0A8I5YCC9_RAT	Itga5	Integrin subunit alpha 5	1	TADGRPQEVGR	TADGRPQEVGR	3	TADGRPQEVGR3			49493.6
P02767	P02767	TTHY_RAT	Ttr	Transthyretin	1	TADGSWEPFASGK	TADGSWEPFASGK	2	TADGSWEPFASGK2	840718	746218	879509
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	TADHAAPEITLDPLETVGGEIR	TADHAAPEITLDPLETVGGEIR	3	TADHAAPEITLDPLETVGGEIR3	6411.66	6675.05	3731.98
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	TADIPGLK	TADIPGLK	2	TADIPGLK2	537610	657496	477824
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	TADMAEVETTTNVGVPGR	TADMAEVETTTNVGVPGR	2	TADMAEVETTTNVGVPGR2	11569.4	9962.21	10261.3
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	TADMAEVETTTNVGVPGR	TADMAEVETTTNVGVPGR	3	TADMAEVETTTNVGVPGR3		17414.8	16304.1
D4AAU6	D4AAU6	D4AAU6_RAT	Ccdc25	Coiled-coil domain-containing protein 25	1	TADMDVGQIGFHR	TADMDVGQIGFHR	3	TADMDVGQIGFHR3	11361.3	8924.54	8537.38
Q4QQU7	Q4QQU7	GRTP1_RAT	Grtp1	Growth hormone-regulated TBC protein 1	1	TADPCLQK	TADPC(UniMod:4)LQK	2	TADPC(UniMod:4)LQK2	5561.47	2367.63	
D3ZP13	D3ZP13	D3ZP13_RAT	Qsox2	Sulfhydryl oxidase	1	TADQAVLWLWR	TADQAVLWLWR	2	TADQAVLWLWR2	8032.07	11604.4	11040.3
Q63692	Q63692	CDC37_RAT	Cdc37	Hsp90 co-chaperone Cdc37	1	TADQQYMEGFK	TADQQYMEGFK	2	TADQQYMEGFK2	108814	114445	110843
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	TADQTSLHLVDFLVQNCGNLDK	TADQTSLHLVDFLVQNC(UniMod:4)GNLDK	3	TADQTSLHLVDFLVQNC(UniMod:4)GNLDK3	11105.6	11616.1	10099.9
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	TADTVLTR	TADTVLTR	2	TADTVLTR2	30335.2	31757.5	36939.9
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	TADVVVMMLDATK	TADVVVMMLDATK	2	TADVVVMMLDATK2	62557.5	77697.5	52300.7
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	TADVVVMMLDATK	TADVVVMMLDATK	3	TADVVVMMLDATK3	13789	10943.7	11231.2
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	TAEALDK	TAEALDK	1	TAEALDK1	7570.13		7271.25
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	TAEALDKDGWLHTGDIGK	TAEALDKDGWLHTGDIGK	3	TAEALDKDGWLHTGDIGK3	2598.98	6328.03	4933.55
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	TAEALDKDGWLHTGDIGK	TAEALDKDGWLHTGDIGK	4	TAEALDKDGWLHTGDIGK4	13389.5	11185.8	11268.3
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	TAEAQLAYELQGAR	TAEAQLAYELQGAR	2	TAEAQLAYELQGAR2	24756.2	15597.8	30084.1
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	TAEAQLAYELQGAR	TAEAQLAYELQGAR	3	TAEAQLAYELQGAR3	8977.72	5568.74	13274.5
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	TAEAVHFATLLYK	TAEAVHFATLLYK	3	TAEAVHFATLLYK3	6271.04	10687	14190.8
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	TAECETSEADNILLAGHLR	TAEC(UniMod:4)ETSEADNILLAGHLR	3	TAEC(UniMod:4)ETSEADNILLAGHLR3	23664.4	36146.8	21899.4
F7FF81	F7FF81	F7FF81_RAT	Pfdn5	Prefoldin subunit 5	1	TAEDAKDFFK	TAEDAKDFFK	3	TAEDAKDFFK3	12791.5	7667.87	12439.9
Q3B7U9	Q3B7U9	FKBP8_RAT	Fkbp8	Peptidyl-prolyl cis-trans isomerase FKBP8	1	TAEDGPDLEMLSGQER	TAEDGPDLEMLSGQER	2	TAEDGPDLEMLSGQER2	13612.7	17206.1	11711.2
Q3B7U9	Q3B7U9	FKBP8_RAT	Fkbp8	Peptidyl-prolyl cis-trans isomerase FKBP8	1	TAEDGPDLEMLSGQER	TAEDGPDLEMLSGQER	3	TAEDGPDLEMLSGQER3	7755.57		10125.1
O35547	O35547	ACSL4_RAT	Acsl4	Long-chain-fatty-acid--CoA ligase 4	1	TAEDYSVDENGQR	TAEDYSVDENGQR	2	TAEDYSVDENGQR2	1458.8	3287.24	4833.21
P04550	P04550	PTMS_RAT	Ptms	Parathymosin	1	TAEEEDEADPK	TAEEEDEADPK	2	TAEEEDEADPK2	16671		32311.4
P04550	P04550	PTMS_RAT	Ptms	Parathymosin	1	TAEEEDEADPKR	TAEEEDEADPKR	2	TAEEEDEADPKR2			13181.2
P04550	P04550	PTMS_RAT	Ptms	Parathymosin	1	TAEEEDEADPKR	TAEEEDEADPKR	3	TAEEEDEADPKR3			21777.2
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	TAEEICESSSK	TAEEIC(UniMod:4)ESSSK	2	TAEEIC(UniMod:4)ESSSK2	117091	100240	113268
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	TAEELMNFSK	TAEELMNFSK	2	TAEELMNFSK2	200333	209994	226237
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	TAEENLDR	TAEENLDR	2	TAEENLDR2		170524	
G3V9M3	G3V9M3	G3V9M3_RAT	Wdr47	WD repeat domain 47	1	TAEETVNVK	TAEETVNVK	2	TAEETVNVK2	8147.79	10114.8	
Q68FT7	Q68FT7	Q68FT7_RAT	Farsb	Phenylalanine--tRNA ligase beta subunit	1	TAEFQVAR	TAEFQVAR	2	TAEFQVAR2	33564.9	29153.3	32757.4
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	TAEGCYR	TAEGC(UniMod:4)YR	2	TAEGC(UniMod:4)YR2	18028.8		36836
M0R8J3	M0R8J3	M0R8J3_RAT	Jmy	Junction mediating and regulatory protein, p53 cofactor	1	TAEGLQR	TAEGLQR	2	TAEGLQR2	13166.2	12463.6	
Q5FVJ0	Q5FVJ0	RUFY3_RAT	Rufy3	Protein RUFY3	1	TAEGQALSEAR	TAEGQALSEAR	2	TAEGQALSEAR2	13374.5	12236.3	16578.4
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	TAEHEAAQQDLQSK	TAEHEAAQQDLQSK	2	TAEHEAAQQDLQSK2	1091.59		3033.53
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	TAEHEAAQQDLQSK	TAEHEAAQQDLQSK	3	TAEHEAAQQDLQSK3	4682.96		9292.95
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	TAEHFQEAVK	TAEHFQEAVK	2	TAEHFQEAVK2	5029.4	12219.6	6101.26
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	TAEHFQEAVK	TAEHFQEAVK	3	TAEHFQEAVK3	72855.4	54750.4	60585.4
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	TAEHFQEAVKENK	TAEHFQEAVKENK	3	TAEHFQEAVKENK3	7643.18	9518.23	19870.4
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	TAEHFQEAVKENK	TAEHFQEAVKENK	4	TAEHFQEAVKENK4		20933	3618.14
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	TAEILYHLALK	TAEILYHLALK	2	TAEILYHLALK2	3264.61	5972.18	
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	TAEILYHLALK	TAEILYHLALK	3	TAEILYHLALK3	20099.8	24168	21491.4
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	TAEIVHAATTNLR	TAEIVHAATTNLR	2	TAEIVHAATTNLR2	4724.35	5384.19	6946.9
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	TAEIVHAATTNLR	TAEIVHAATTNLR	3	TAEIVHAATTNLR3	19952.4	27022.3	32770.3
A0A8I6ASK1	A0A8I6ASK1	A0A8I6ASK1_RAT	P4ha2	procollagen-proline 4-dioxygenase	1	TAELLQVANYGMGGQYEPHFDFSR	TAELLQVANYGMGGQYEPHFDFSR	3	TAELLQVANYGMGGQYEPHFDFSR3	31843.9	19382.6	28039.5
Q63060	Q63060	GLPK_RAT	Gk	Glycerol kinase	1	TAELLSHHQVEIK	TAELLSHHQVEIK	3	TAELLSHHQVEIK3	13359.4	4479.13	14933.8
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	TAELNSYPR	TAELNSYPR	2	TAELNSYPR2	49225.5	40751.9	47844.5
D3ZVW3	D3ZVW3	D3ZVW3_RAT	Zc3h4	Zinc finger CCCH-type containing 4	1	TAELTSDTSAQPK	TAELTSDTSAQPK	2	TAELTSDTSAQPK2	4191.02	5194.77	2301.96
A0A0G2K0W3	A0A0G2K0W3	A0A0G2K0W3_RAT	Ttyh3	Protein tweety homolog	1	TAEPNLQSLEK	TAEPNLQSLEK	2	TAEPNLQSLEK2	131879	133925	150883
P02767	P02767	TTHY_RAT	Ttr	Transthyretin	1	TAESGELHGLTTDEK	TAESGELHGLTTDEK	2	TAESGELHGLTTDEK2	53018.2	53006	54751.1
P02767	P02767	TTHY_RAT	Ttr	Transthyretin	1	TAESGELHGLTTDEK	TAESGELHGLTTDEK	3	TAESGELHGLTTDEK3	1.5788e+06	1.80397e+06	1.84721e+06
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	TAETDAFCGR	TAETDAFC(UniMod:4)GR	2	TAETDAFC(UniMod:4)GR2	96253.7	105066	123282
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TAEVLANK	TAEVLANK	1	TAEVLANK1	9921.52	10872.6	6822.69
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TAEVLANK	TAEVLANK	2	TAEVLANK2	202223	236809	215958
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	TAEYDVAFGER	TAEYDVAFGER	2	TAEYDVAFGER2	36439.8	45855	32546.2
P61983	P61983	1433G_RAT	Ywhag	14-3-3 protein gamma	1	TAFDDAIAELDTLNEDSYK	TAFDDAIAELDTLNEDSYK	3	TAFDDAIAELDTLNEDSYK3	35043.7	50806.2	40391
P68255	P68255	1433T_RAT	Ywhaq	14-3-3 protein theta	1	TAFDEAIAELDTLNEDSYK	TAFDEAIAELDTLNEDSYK	3	TAFDEAIAELDTLNEDSYK3	746463	488363	619386
P35213	P35213	1433B_RAT	Ywhab	14-3-3 protein beta/alpha	1	TAFDEAIAELDTLNEESYK	TAFDEAIAELDTLNEESYK	3	TAFDEAIAELDTLNEESYK3	159720	65136.8	121545
P63102	P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	1	TAFDEAIAELDTLSEESYK	TAFDEAIAELDTLSEESYK	3	TAFDEAIAELDTLSEESYK3	4182.02	4127.02	409368
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	TAFFSEDSR	TAFFSEDSR	2	TAFFSEDSR2	13962.3	12495.1	16375.5
F1LUU1	F1LUU1	F1LUU1_RAT	Itga11	Integrin subunit alpha 11	1	TAFGIEFAR	TAFGIEFAR	2	TAFGIEFAR2	12696.7		7800.34
D3ZZL3	D3ZZL3	D3ZZL3_RAT	Naglu	N-acetyl-alpha-glucosaminidase	1	TAFLNQDLDLLLR	TAFLNQDLDLLLR	2	TAFLNQDLDLLLR2	4708.08	4111.14	783.715
P54777	P54777	PEX6_RAT	Pex6	Peroxisomal ATPase PEX6	1	TAFPHELEVPVLSESQR	TAFPHELEVPVLSESQR	3	TAFPHELEVPVLSESQR3	6665.46		5754.27
D3ZGB8	D3ZGB8	D3ZGB8_RAT	Cilp	Cartilage intermediate layer protein	1	TAFQISMAK	TAFQISMAK	2	TAFQISMAK2	33569.4	34007.6	21246.6
Q63055	Q63055	ARFRP_RAT	Arfrp1	ADP-ribosylation factor-related protein 1	1	TAFSDCTCK	TAFSDC(UniMod:4)TC(UniMod:4)K	2	TAFSDC(UniMod:4)TC(UniMod:4)K2	33691.9	24404.5	37693.6
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	TAFSESEDDESRPAVALIR	TAFSESEDDESRPAVALIR	3	TAFSESEDDESRPAVALIR3	31209.2	27555.8	12801.1
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	TAFTDLPEQVPESISNQK	TAFTDLPEQVPESISNQK	3	TAFTDLPEQVPESISNQK3	79910.1	77130.5	96162.3
A0A8I6GB53	A0A8I6GB53	A0A8I6GB53_RAT	Slc24a5	Solute carrier family 24 member 5	1	TAFTNASAPIEVNSK	TAFTNASAPIEVNSK	2	TAFTNASAPIEVNSK2		4885.16	2115.98
F7FL28	F7FL28	F7FL28_RAT	Napsa	Napsin A aspartic peptidase	1	TAFVPLSK	TAFVPLSK	2	TAFVPLSK2	91616.7	85279.8	81212.6
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	TAGAALTPTEER	TAGAALTPTEER	2	TAGAALTPTEER2	100662	89386.8	77383.8
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	TAGAVAGK	TAGAVAGK	1	TAGAVAGK1			15373.9
Q63369	Q63369	NFKB1_RAT	Nfkb1	Nuclear factor NF-kappa-B p105 subunit	1	TAGCVTGGEEIYLLCDK	TAGC(UniMod:4)VTGGEEIYLLC(UniMod:4)DK	2	TAGC(UniMod:4)VTGGEEIYLLC(UniMod:4)DK2	2779.06	4015.42	2333.88
P58751	P58751	RELN_RAT	Reln	Reelin	1	TAGFCGNPSFHLYWPNK	TAGFC(UniMod:4)GNPSFHLYWPNK	3	TAGFC(UniMod:4)GNPSFHLYWPNK3			5118.14
P58751	P58751	RELN_RAT	Reln	Reelin	1	TAGFCGNPSFHLYWPNKK	TAGFC(UniMod:4)GNPSFHLYWPNKK	3	TAGFC(UniMod:4)GNPSFHLYWPNKK3	16131.1	15645.8	14897.7
P58751	P58751	RELN_RAT	Reln	Reelin	1	TAGFCGNPSFHLYWPNKK	TAGFC(UniMod:4)GNPSFHLYWPNKK	4	TAGFC(UniMod:4)GNPSFHLYWPNKK4	34480.1	35664.6	43350.6
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	TAGILAGIK	TAGILAGIK	2	TAGILAGIK2	19053.3	15557.2	16647
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	TAGKPILF	TAGKPILF	2	TAGKPILF2	28872	23972.7	36207.7
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	TAGLEEK	TAGLEEK	1	TAGLEEK1	7823.9	3469.1	24410.5
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	TAGLHVTEYEDNLK	TAGLHVTEYEDNLK	2	TAGLHVTEYEDNLK2	5445.02	4968.64	4003.92
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	TAGLHVTEYEDNLK	TAGLHVTEYEDNLK	3	TAGLHVTEYEDNLK3	71172.3	63858.7	67495.9
Q3KR59	Q3KR59	UBP10_RAT	Usp10	Ubiquitin carboxyl-terminal hydrolase 10	1	TAGLPEGCR	TAGLPEGC(UniMod:4)R	2	TAGLPEGC(UniMod:4)R2	58843.3	51529.8	58234.9
Q6IRE4	Q6IRE4	TS101_RAT	Tsg101	Tumor susceptibility gene 101 protein	1	TAGLSDLY	TAGLSDLY	1	TAGLSDLY1	16890.4	14328.2	11211
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	TAGLVKASGR	TAGLVKASGR	2	TAGLVKASGR2	9279.01	8948.1	10099.9
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	TAGNSEFLGK	TAGNSEFLGK	2	TAGNSEFLGK2		42892.8	45392.9
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	TAGPQSQLLAGIVVDKPPSTMR	TAGPQSQLLAGIVVDKPPSTMR	3	TAGPQSQLLAGIVVDKPPSTMR3	308385	343343	308000
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	TAGPQSQVLCGVMMDR	TAGPQSQVLC(UniMod:4)GVMMDR	2	TAGPQSQVLC(UniMod:4)GVMMDR2	135225	144012	127269
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	TAGPQSQVLCGVMMDR	TAGPQSQVLC(UniMod:4)GVMMDR	3	TAGPQSQVLC(UniMod:4)GVMMDR3	59646.5	51342.9	77945.1
D3ZXD8	D3ZXD8	TM245_RAT	Tmem245	Transmembrane protein 245	1	TAGPSETPR	TAGPSETPR	2	TAGPSETPR2	65241.1		78748.9
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	TAGTICLETFK	TAGTIC(UniMod:4)LETFK	2	TAGTIC(UniMod:4)LETFK2	71687.2	117206	124723
Q6AYD5	A0A096MJE3;Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	0	TAGTICLETFKDFPQMGR	TAGTIC(UniMod:4)LETFKDFPQMGR	3	TAGTIC(UniMod:4)LETFKDFPQMGR3	21405.1	25802.2	19691.7
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	TAGTLFGEGFR	TAGTLFGEGFR	2	TAGTLFGEGFR2	47446.4	34368.6	43895.9
Q5U2N3	Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	1	TAGTPDGPEAPPGPDASPDASFGK	TAGTPDGPEAPPGPDASPDASFGK	3	TAGTPDGPEAPPGPDASPDASFGK3	4649.36	6306.36	4071.18
M0RCA3	M0RCA3	M0RCA3_RAT	Zfpl1	Zinc finger protein-like 1	1	TAGVHGDCDDDKYR	TAGVHGDC(UniMod:4)DDDKYR	2	TAGVHGDC(UniMod:4)DDDKYR2			704.719
M0RCA3	M0RCA3	M0RCA3_RAT	Zfpl1	Zinc finger protein-like 1	1	TAGVHGDCDDDKYR	TAGVHGDC(UniMod:4)DDDKYR	3	TAGVHGDC(UniMod:4)DDDKYR3			8693.75
M0RCA3	M0RCA3	M0RCA3_RAT	Zfpl1	Zinc finger protein-like 1	1	TAGVHGDCDDDKYR	TAGVHGDC(UniMod:4)DDDKYR	4	TAGVHGDC(UniMod:4)DDDKYR4			6188.08
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	TAGWNIPMGLLFSR	TAGWNIPMGLLFSR	2	TAGWNIPMGLLFSR2	3.48406e+06	3.38044e+06	3.83148e+06
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	TAGWNIPMGLLFSR	TAGWNIPMGLLFSR	3	TAGWNIPMGLLFSR3	131045	116293	125781
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	TAGYPNVNIHNFTTSWR	TAGYPNVNIHNFTTSWR	3	TAGYPNVNIHNFTTSWR3	1.17223e+06	1.32074e+06	1.26644e+06
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	TAGYPQVNVTNFTSSWK	TAGYPQVNVTNFTSSWK	2	TAGYPQVNVTNFTSSWK2	53407.3	47894.5	38297
F7ETI3	F7ETI3	F7ETI3_RAT	Wdr41	WD repeat domain 41	1	TAHDSNILHIDK	TAHDSNILHIDK	3	TAHDSNILHIDK3	5064.82		
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	TAHISGLPPSTDFIVYLSGIAPSIR	TAHISGLPPSTDFIVYLSGIAPSIR	3	TAHISGLPPSTDFIVYLSGIAPSIR3	446635	477906	453981
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	TAHISGLPPSTDFIVYLSGIAPSIR	TAHISGLPPSTDFIVYLSGIAPSIR	4	TAHISGLPPSTDFIVYLSGIAPSIR4	15371.8	21963.8	11506.1
A0A8I6A0B7	A0A8I6A0B7	A0A8I6A0B7_RAT	Nipsnap3a	Nipsnap homolog 3B	1	TAHSEMIGYWTVEFGGK	TAHSEMIGYWTVEFGGK	2	TAHSEMIGYWTVEFGGK2	8540.56	8512.89	3785.47
A0A8I6A0B7	A0A8I6A0B7	A0A8I6A0B7_RAT	Nipsnap3a	Nipsnap homolog 3B	1	TAHSEMIGYWTVEFGGK	TAHSEMIGYWTVEFGGK	3	TAHSEMIGYWTVEFGGK3	41551.1	27637.7	23256.1
Q5MPA9	Q5MPA9;Q9ESI7	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	0	TAHSFEQVLTDITEAIK	TAHSFEQVLTDITEAIK	2	TAHSFEQVLTDITEAIK2	2767.3	3831.95	1510.81
Q5MPA9	Q5MPA9;Q9ESI7	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	0	TAHSFEQVLTDITEAIK	TAHSFEQVLTDITEAIK	3	TAHSFEQVLTDITEAIK3	43469.5	31282.5	17413.1
A0A8I5ZXD6	A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	1	TAHYGMLFDEYQGLSHLEALEILSNESESK	TAHYGMLFDEYQGLSHLEALEILSNESESK	4	TAHYGMLFDEYQGLSHLEALEILSNESESK4	9728.8	10445.1	12613.6
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	TAICIENSCMVR	TAIC(UniMod:4)IENSC(UniMod:4)MVR	2	TAIC(UniMod:4)IENSC(UniMod:4)MVR2	21462.6	13013.4	7590.84
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	TAIDLIGR	TAIDLIGR	2	TAIDLIGR2	30397.5	25185.5	28803.9
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	TAIDLSLLGAK	TAIDLSLLGAK	2	TAIDLSLLGAK2	5314.75	7818.96	6804.55
Q63789	Q63789	P55G_RAT	Pik3r3	Phosphatidylinositol 3-kinase regulatory subunit gamma	1	TAIEAFNETIK	TAIEAFNETIK	2	TAIEAFNETIK2	12892.8	8190.52	6267.51
Q9R1J8	Q9R1J8	P3H1_RAT	P3h1	Prolyl 3-hydroxylase 1	1	TAIEESQAER	TAIEESQAER	2	TAIEESQAER2	12449.3	8594.44	11101.3
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	TAIESFALMVK	TAIESFALMVK	2	TAIESFALMVK2	32454.9	22253.2	24858.5
Q5XI22	Q5XI22	THIC_RAT	Acat2	Acetyl-CoA acetyltransferase, cytosolic	1	TAIGSFNGALSTVPVHNLGTTVIK	TAIGSFNGALSTVPVHNLGTTVIK	3	TAIGSFNGALSTVPVHNLGTTVIK3	3144.17	6090.17	8575.07
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	TAIIANVHPGSR	TAIIANVHPGSR	3	TAIIANVHPGSR3	1949.1	16803.1	5756.09
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TAILFQR	TAILFQR	2	TAILFQR2	396855	368812	387197
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	TAIPFTQEPQR	TAIPFTQEPQR	2	TAIPFTQEPQR2	102988	119871	113306
D3ZTI3	D3ZTI3	D3ZTI3_RAT	Cdh24	Cadherin 24	1	TAIPNMDR	TAIPNMDR	2	TAIPNMDR2	57029.8	39319	48062.6
D3ZTI3	D3ZTI3	D3ZTI3_RAT	Cdh24	Cadherin 24	1	TAIPNMDRETQEEFLVVIQAK	TAIPNMDRETQEEFLVVIQAK	4	TAIPNMDRETQEEFLVVIQAK4	15695.5	14332.1	19897.6
Q9WTN5	Q9WTN5	TPC1_RAT	Tpcn1	Two pore calcium channel protein 1	1	TAIQHAYHLLVSQR	TAIQHAYHLLVSQR	3	TAIQHAYHLLVSQR3	4720.94	5337.41	12917.4
Q9WTN5	Q9WTN5	TPC1_RAT	Tpcn1	Two pore calcium channel protein 1	1	TAIQHAYHLLVSQR	TAIQHAYHLLVSQR	4	TAIQHAYHLLVSQR4	6362.52	5156.45	5895.44
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	TAIQSGVSHPDIQLLHPINLEFCVNR	TAIQSGVSHPDIQLLHPINLEFC(UniMod:4)VNR	4	TAIQSGVSHPDIQLLHPINLEFC(UniMod:4)VNR4	3801.15	3686.53	4483.03
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	TAISFFSR	TAISFFSR	2	TAISFFSR2	65681.7	62429.7	64679.3
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	TALAAFNAQNNGTYFK	TALAAFNAQNNGTYFK	2	TALAAFNAQNNGTYFK2	1906.46	3949.86	2699.96
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	TALAAFNAQNNGTYFK	TALAAFNAQNNGTYFK	3	TALAAFNAQNNGTYFK3	7589.08	10861.4	13955.2
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	TALAATNPAVR	TALAATNPAVR	2	TALAATNPAVR2	211378	205340	181266
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	TALAEAELEYNPEHVSR	TALAEAELEYNPEHVSR	3	TALAEAELEYNPEHVSR3	18478.3	21073.1	11029.6
D3ZPA1	D3ZPA1	D3ZPA1_RAT	Gcc1	GRIP and coiled-coil domain containing 1	1	TALAEDQLR	TALAEDQLR	2	TALAEDQLR2	21865.4	19370.2	14963.8
P60123	A0A0G2K0H9;P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	0	TALALAIAQELGSK	TALALAIAQELGSK	2	TALALAIAQELGSK2	49569.2	41136	54050.3
P60123	A0A0G2K0H9;P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	0	TALALAIAQELGSK	TALALAIAQELGSK	3	TALALAIAQELGSK3	9311.23	6666.83	5862.9
Q5U2U2	Q5U2U2	CRKL_RAT	Crkl	Crk-like protein	1	TALALEVGDIVK	TALALEVGDIVK	2	TALALEVGDIVK2	24750.3	32745.7	24777
Q63768	Q63768	CRK_RAT	Crk	Adapter molecule crk	1	TALALEVGELVK	TALALEVGELVK	2	TALALEVGELVK2	19697.2	13361.8	20605.2
Q68FU3	Q68FU3	ETFB_RAT	Etfb	Electron transfer flavoprotein subunit beta	1	TALAMGADR	TALAMGADR	2	TALAMGADR2	311317	255450	277511
D3ZHA1	D3ZHA1	D3ZHA1_RAT	B4gat1	Beta-1,4-glucuronyltransferase 1	1	TALASGGVLDASGDYR	TALASGGVLDASGDYR	2	TALASGGVLDASGDYR2	3454.57	4797.32	2461.36
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	TALASPTPTR	TALASPTPTR	2	TALASPTPTR2	136386	122350	125418
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	TALDSMSQK	TALDSMSQK	2	TALDSMSQK2	62886.7	46310.4	51355.2
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	TALEEEIK	TALEEEIK	2	TALEEEIK2	76884.3	98463.9	90128.8
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	TALEEQLSR	TALEEQLSR	2	TALEEQLSR2	19705.8	22224.1	22932.4
D3ZE20	D3ZE20	D3ZE20_RAT	Nfatc1	Nuclear factor of activated T-cells 1	1	TALEHVPSVALK	TALEHVPSVALK	3	TALEHVPSVALK3	18490.3	13705.8	13689.6
Q8CGU4	Q8CGU4	AGAP2_RAT	Agap2	Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2	1	TALFYAR	TALFYAR	2	TALFYAR2	6444.2	11083.8	8216.54
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	TALHDAAMADCPSSIQLLCDHGASVNAK	TALHDAAMADC(UniMod:4)PSSIQLLC(UniMod:4)DHGASVNAK	4	TALHDAAMADC(UniMod:4)PSSIQLLC(UniMod:4)DHGASVNAK4	11284.9	9937.11	14900.5
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	TALHHAAFSGHGEMVK	TALHHAAFSGHGEMVK	3	TALHHAAFSGHGEMVK3	2782.37	2934	2779.12
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	TALHHAAFSGHGEMVK	TALHHAAFSGHGEMVK	4	TALHHAAFSGHGEMVK4	37807.3		28952.5
A0A8I6AGL0	A0A8I6AGL0	A0A8I6AGL0_RAT	Ankrd44	Ankyrin repeat domain 44	1	TALHYAAASDMDR	TALHYAAASDMDR	2	TALHYAAASDMDR2	3284.05	3009.21	
A0A8I6AGL0	A0A8I6AGL0	A0A8I6AGL0_RAT	Ankrd44	Ankyrin repeat domain 44	1	TALHYAAASDMDR	TALHYAAASDMDR	3	TALHYAAASDMDR3	2689.38	4187.64	6556.58
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	TALIFEGTNTHWTFR	TALIFEGTNTHWTFR	3	TALIFEGTNTHWTFR3	38446.5	31509.8	33287.7
P63324	A0A8I6AWW2;A0A8I5ZX29;P63324;D3ZEB8;A0A8I6AKK1;D3ZG05	RS12_RAT	Rps12	Small ribosomal subunit protein eS12	0	TALIHDGLAR	TALIHDGLAR	2	TALIHDGLAR2	22615.9	17941.5	22492.2
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	TALINADELPTDVASGEALLAR	TALINADELPTDVASGEALLAR	3	TALINADELPTDVASGEALLAR3	7812.77	15962.2	9844.29
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	TALINATGEEVAMR	TALINATGEEVAMR	2	TALINATGEEVAMR2	15773	21873.2	21080.7
Q4V7E8	Q4V7E8	LRRF2_RAT	Lrrfip2	Leucine-rich repeat flightless-interacting protein 2	1	TALLAQQ	TALLAQQ	1	TALLAQQ1	61711.3	61909.6	61091
P63039	P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	1	TALLDAAGVASLLTTAEAVVTEIPK	TALLDAAGVASLLTTAEAVVTEIPK	3	TALLDAAGVASLLTTAEAVVTEIPK3		4859.15	3778.15
Q8VID1	Q8VID1	DHRS4_RAT	Dhrs4	Dehydrogenase/reductase SDR family member 4	1	TALLGLTK	TALLGLTK	2	TALLGLTK2	40263.3	33477.2	50713.5
Q5PQR3	Q5PQR3	BTBD9_RAT	Btbd9	BTB/POZ domain-containing protein 9	1	TALLNIVLR	TALLNIVLR	2	TALLNIVLR2	2129.1	2649.83	
P55280	P55280	CADH6_RAT	Cdh6	Cadherin-6	1	TALLNMDR	TALLNMDR	2	TALLNMDR2	63010.4	42399.8	36463.6
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	TALLTAGDIYLLSTFR	TALLTAGDIYLLSTFR	2	TALLTAGDIYLLSTFR2	11861.7	19598.7	11535.4
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	TALLTAGDIYLLSTFR	TALLTAGDIYLLSTFR	3	TALLTAGDIYLLSTFR3	2580.58	2823.28	4202.02
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	TALLTWTAPK	TALLTWTAPK	2	TALLTWTAPK2	317988	400547	349499
P27274	P27274	CD59_RAT	Cd59	CD59 glycoprotein	1	TALLVTSVLAAILKPCF	TALLVTSVLAAILKPC(UniMod:4)F	2	TALLVTSVLAAILKPC(UniMod:4)F2	4162.94		
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	TALMLGCEYGCR	TALMLGC(UniMod:4)EYGC(UniMod:4)R	2	TALMLGC(UniMod:4)EYGC(UniMod:4)R2	40676.9	44426.9	45906.4
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	TALNHCNLCR	TALNHC(UniMod:4)NLC(UniMod:4)R	2	TALNHC(UniMod:4)NLC(UniMod:4)R2	4996.63	1541.62	3671.17
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	TALNHCNLCR	TALNHC(UniMod:4)NLC(UniMod:4)R	3	TALNHC(UniMod:4)NLC(UniMod:4)R3	71832	61099.3	68278.8
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	TALNLFFK	TALNLFFK	2	TALNLFFK2	84128.1	90133.1	83694.9
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	TALNNTLDLPNVK	TALNNTLDLPNVK	2	TALNNTLDLPNVK2	36854.2	35923.2	45973.3
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	TALNSFMHSK	TALNSFMHSK	2	TALNSFMHSK2	5258.92	2845.61	6623.64
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	TALPHGTDNEVAALQPPLVQLHEGSSYTR	TALPHGTDNEVAALQPPLVQLHEGSSYTR	4	TALPHGTDNEVAALQPPLVQLHEGSSYTR4	24109.4	21291.8	23620.6
O88339	O88339	EPN1_RAT	Epn1	Epsin-1	1	TALPTSGSSTGELELLAGEVPAR	TALPTSGSSTGELELLAGEVPAR	3	TALPTSGSSTGELELLAGEVPAR3	11444.5		9776.21
Q6IE70	Q6IE70	PAN2_RAT	Pan2	PAN2-PAN3 deadenylation complex catalytic subunit Pan2	1	TALQLYR	TALQLYR	2	TALQLYR2	12052.7	7666.36	11259.3
F1M943	F1M943	F1M943_RAT	Armc8	Armadillo repeat-containing protein 8	1	TALQQYLA	TALQQYLA	2	TALQQYLA2		7873.2	4495.46
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	TALSDPSSR	TALSDPSSR	2	TALSDPSSR2	7699.82	7361.94	12480.1
Q5RJK6	Q5RJK6	Q5RJK6_RAT	Inpp1	Inositol polyphosphate-1-phosphatase	1	TALSDVCGGSVFPAAGAGYK	TALSDVC(UniMod:4)GGSVFPAAGAGYK	2	TALSDVC(UniMod:4)GGSVFPAAGAGYK2	4512.25	3214.81	3931.82
A0A0G2JVY4	A0A0G2JVY4	A0A0G2JVY4_RAT	Tmem63a	Transmembrane protein 63a	1	TALSPQQQQTYGAIR	TALSPQQQQTYGAIR	2	TALSPQQQQTYGAIR2	11823.8	20235.1	9813.83
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	TALTYYLDITNPPR	TALTYYLDITNPPR	2	TALTYYLDITNPPR2	9597.09	7430.65	7707.71
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	TALVANTSNMPVAAR	TALVANTSNMPVAAR	2	TALVANTSNMPVAAR2	27123.4	29022.9	19643.8
A0A0G2K6C7	A0A0G2K6C7	A0A0G2K6C7_RAT	Trim5	Tripartite motif-containing 5	1	TALVEEVDHEYKEK	TALVEEVDHEYKEK	3	TALVEEVDHEYKEK3	28903.3	34124.5	26491
A0A0G2K6C7	A0A0G2K6C7	A0A0G2K6C7_RAT	Trim5	Tripartite motif-containing 5	1	TALVEEVDHEYKEK	TALVEEVDHEYKEK	4	TALVEEVDHEYKEK4	21514.4	24424.2	22122.5
A0A8I6AGL0	A0A8I6AGL0	A0A8I6AGL0_RAT	Ankrd44	Ankyrin repeat domain 44	1	TALYLAAFK	TALYLAAFK	2	TALYLAAFK2	7182.29	9981.12	5990.93
Q9EQG6	Q9EQG6	KDIS_RAT	Kidins220	Kinase D-interacting substrate of 220 kDa	1	TALYWAVEK	TALYWAVEK	2	TALYWAVEK2	5325.4	9183.46	6969.94
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	TAMDNSEIAGEK	TAMDNSEIAGEK	2	TAMDNSEIAGEK2	66294.7	75138.3	73723.7
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	TAMDNSEIAGEKK	TAMDNSEIAGEKK	2	TAMDNSEIAGEKK2	13496.8	9284.58	14913.9
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	TAMDNSEIAGEKK	TAMDNSEIAGEKK	3	TAMDNSEIAGEKK3	129553	127735	132933
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	TAMGEEYK	TAMGEEYK	2	TAMGEEYK2	42452	37504.4	46877.8
A0A8I6AS56	A0A8I6AS56	A0A8I6AS56_RAT	Abhd11	Abhydrolase domain containing 11	1	TAMLLALQRPDVVER	TAMLLALQRPDVVER	3	TAMLLALQRPDVVER3	37190.1	44131.1	28833
A1L1J8	A1L1J8	A1L1J8_RAT	Rab5b	RAB5B, member RAS oncogene family	1	TAMNVNDLFLAIAK	TAMNVNDLFLAIAK	2	TAMNVNDLFLAIAK2	52864.6	57347.4	44280.7
A1L1J8	A1L1J8	A1L1J8_RAT	Rab5b	RAB5B, member RAS oncogene family	1	TAMNVNDLFLAIAK	TAMNVNDLFLAIAK	3	TAMNVNDLFLAIAK3	5329.84	5103.89	3976.72
B0BNK1	M0RDE4;B0BNK1	B0BNK1_RAT	Rab5c	RAB5C, member RAS oncogene family	0	TAMNVNEIFMAIAK	TAMNVNEIFMAIAK	2	TAMNVNEIFMAIAK2	54708	54444.8	67849.9
B0BNK1	M0RDE4;B0BNK1	B0BNK1_RAT	Rab5c	RAB5C, member RAS oncogene family	0	TAMNVNEIFMAIAK	TAMNVNEIFMAIAK	3	TAMNVNEIFMAIAK3	1591.26	7713.65	1822.99
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	TAMSLIER	TAMSLIER	2	TAMSLIER2	44194.9	37040.5	45619.5
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	TAMVATVSPAADNYDETLSTLR	TAMVATVSPAADNYDETLSTLR	3	TAMVATVSPAADNYDETLSTLR3		2902.23	9094.36
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	TAMVELINK	TAMVELINK	2	TAMVELINK2	12060.8	13339.4	15875.7
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	TANDAVELHIK	TANDAVELHIK	2	TANDAVELHIK2	3804.4		
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	TANDAVELHIK	TANDAVELHIK	3	TANDAVELHIK3		8357.13	
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	TANEECGSLR	TANEEC(UniMod:4)GSLR	2	TANEEC(UniMod:4)GSLR2	228963	252723	277565
D3ZII8	D3ZII8	D3ZII8_RAT	Smyd5	Histone-lysine N-trimethyltransferase SMYD5	1	TANEEEEIVHK	TANEEEEIVHK	2	TANEEEEIVHK2	5714.93	4366.74	1047.65
D3ZII8	D3ZII8	D3ZII8_RAT	Smyd5	Histone-lysine N-trimethyltransferase SMYD5	1	TANEEEEIVHK	TANEEEEIVHK	3	TANEEEEIVHK3	26147.6	26148.5	18854.1
Q9WTT2	Q9WTT2	CLPB_RAT	Clpb	Mitochondrial disaggregase	1	TANEQGVHSLEVLVTR	TANEQGVHSLEVLVTR	3	TANEQGVHSLEVLVTR3	4529.33	5210	7206.55
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	TANGLPAPR	TANGLPAPR	2	TANGLPAPR2	23110.3	25387.9	34363.7
B0K019	B0K019	BAG1_RAT	Bag1	BAG family molecular chaperone regulator 1	1	TANHLEELNK	TANHLEELNK	2	TANHLEELNK2	4319.93		
B0K019	B0K019	BAG1_RAT	Bag1	BAG family molecular chaperone regulator 1	1	TANHLEELNK	TANHLEELNK	3	TANHLEELNK3	6425.9	7270.14	6063.37
B0K019	B0K019	BAG1_RAT	Bag1	BAG family molecular chaperone regulator 1	1	TANHLEELNKELSDIQQGFLAK	TANHLEELNKELSDIQQGFLAK	4	TANHLEELNKELSDIQQGFLAK4	17433.1	9484.28	13883.7
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	TANLGAGAAQPLR	TANLGAGAAQPLR	2	TANLGAGAAQPLR2	277758	285174	246268
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	TANLGAGAAQPLR	TANLGAGAAQPLR	3	TANLGAGAAQPLR3	977855	1.67919e+06	1.65226e+06
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	TANLGAGAAQPLRDR	TANLGAGAAQPLRDR	2	TANLGAGAAQPLRDR2	348079	329826	355051
P02650	P02650	APOE_RAT	Apoe	Apolipoprotein E	1	TANLGAGAAQPLRDR	TANLGAGAAQPLRDR	3	TANLGAGAAQPLRDR3	227443	362258	317113
Q5XIP9	Q5XIP9	TMM43_RAT	Tmem43	Transmembrane protein 43	1	TANLLAEGLSLVVSPDSIHSVAPENEGR	TANLLAEGLSLVVSPDSIHSVAPENEGR	3	TANLLAEGLSLVVSPDSIHSVAPENEGR3	13463.7	16455	14454.8
Q5XIP9	Q5XIP9	TMM43_RAT	Tmem43	Transmembrane protein 43	1	TANLLAEGLSLVVSPDSIHSVAPENEGR	TANLLAEGLSLVVSPDSIHSVAPENEGR	4	TANLLAEGLSLVVSPDSIHSVAPENEGR4	9321.9	11184.8	6214.32
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TANPTAK	TANPTAK	1	TANPTAK1			13381.3
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	TAPAAAVSPMQR	TAPAAAVSPMQR	2	TAPAAAVSPMQR2	48583.3	32839.4	39509.1
B0BNB9	B0BNB9	B0BNB9_RAT	Htra2	HtrA serine peptidase 2	1	TAPAVVYIEILDR	TAPAVVYIEILDR	2	TAPAVVYIEILDR2	28086.5	30751	20408.1
B0BNB9	B0BNB9	B0BNB9_RAT	Htra2	HtrA serine peptidase 2	1	TAPAVVYIEILDRHPFSGR	TAPAVVYIEILDRHPFSGR	4	TAPAVVYIEILDRHPFSGR4	3870.37	10916	5522.71
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	TAPDDLQDLHSLHLQDR	TAPDDLQDLHSLHLQDR	3	TAPDDLQDLHSLHLQDR3	53805.6	36350.3	50471.9
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	TAPDDLQDLHSLHLQDR	TAPDDLQDLHSLHLQDR	4	TAPDDLQDLHSLHLQDR4	73524.4	67108.2	61850.8
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	TAPDLLPQKPLPASAFIEDGR	TAPDLLPQKPLPASAFIEDGR	3	TAPDLLPQKPLPASAFIEDGR3	25548.6	16078.3	18733.4
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	TAPLRFPSLSEPFSSCCIGSAGHR	TAPLRFPSLSEPFSSC(UniMod:4)C(UniMod:4)IGSAGHR	3	TAPLRFPSLSEPFSSC(UniMod:4)C(UniMod:4)IGSAGHR3	1496.48		4705.69
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	TAPLRFPSLSEPFSSCCIGSAGHR	TAPLRFPSLSEPFSSC(UniMod:4)C(UniMod:4)IGSAGHR	4	TAPLRFPSLSEPFSSC(UniMod:4)C(UniMod:4)IGSAGHR4	23516	39825.4	39877.8
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	TAPMEVSNLK	TAPMEVSNLK	2	TAPMEVSNLK2	48126.4	47953.1	33949.6
Q3B7D1	Q3B7D1	UBE2Z_RAT	Ube2z	Ubiquitin-conjugating enzyme E2 Z	1	TAPQCLLR	TAPQC(UniMod:4)LLR	2	TAPQC(UniMod:4)LLR2	242332	232123	212749
A0A0G2QC40	A0A0G2QC40	A0A0G2QC40_RAT	Mkrn1	RING-type E3 ubiquitin transferase	1	TAPSCTEVPLQGSVTK	TAPSC(UniMod:4)TEVPLQGSVTK	2	TAPSC(UniMod:4)TEVPLQGSVTK2	73337.9	66870.1	102278
A0A0G2QC40	A0A0G2QC40	A0A0G2QC40_RAT	Mkrn1	RING-type E3 ubiquitin transferase	1	TAPSCTEVPLQGSVTK	TAPSC(UniMod:4)TEVPLQGSVTK	3	TAPSC(UniMod:4)TEVPLQGSVTK3	3321.49	11474.9	7949.32
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	TAPSLEHFGTSLTLATK	TAPSLEHFGTSLTLATK	2	TAPSLEHFGTSLTLATK2	3950.38	5530.53	
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	TAPSLEHFGTSLTLATK	TAPSLEHFGTSLTLATK	3	TAPSLEHFGTSLTLATK3	32486.4	31225.6	32837.5
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	TAPSSLSSLENLPQPHSSSR	TAPSSLSSLENLPQPHSSSR	3	TAPSSLSSLENLPQPHSSSR3	78420	112123	87155.2
G3V9L1	G3V9L1	G3V9L1_RAT	Tex2	Testis expressed 2	1	TAPSSPLTSPSDTR	TAPSSPLTSPSDTR	2	TAPSSPLTSPSDTR2	12267.5	13904	17522.5
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	TAPTGEYLTTGSFMIR	TAPTGEYLTTGSFMIR	2	TAPTGEYLTTGSFMIR2	23195.7	24487.3	18054.6
D3ZT64	D3ZT64	D3ZT64_RAT	Atg2a	Autophagy related 2A	1	TAPTPLLDTMRPDSLVK	TAPTPLLDTMRPDSLVK	3	TAPTPLLDTMRPDSLVK3	13695	14125.9	25960
Q5M834	Q5M834	DTBP1_RAT	Dtnbp1	Dysbindin	1	TAPYLPK	TAPYLPK	2	TAPYLPK2	39513.6	26369.6	38992.5
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	TAPYVVTGSVDQTVK	TAPYVVTGSVDQTVK	2	TAPYVVTGSVDQTVK2	71136.5	53449.5	74959.6
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	TAPYVVTGSVDQTVK	TAPYVVTGSVDQTVK	3	TAPYVVTGSVDQTVK3	2718.22	1048.83	
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	TAQDSETSPVWDLGSSSLTR	TAQDSETSPVWDLGSSSLTR	3	TAQDSETSPVWDLGSSSLTR3	12834.1		9832.21
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	TAQEGGHQTIPGHR	TAQEGGHQTIPGHR	2	TAQEGGHQTIPGHR2			20712.8
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	TAQEGGHQTIPGHR	TAQEGGHQTIPGHR	3	TAQEGGHQTIPGHR3	252563		194497
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	TAQELTFQQGDTLR	TAQELTFQQGDTLR	2	TAQELTFQQGDTLR2	10318.4	11419.5	5441.6
A0A8I6ARU6	A0A8I6ARU6	A0A8I6ARU6_RAT	Galk1	Galactokinase 1	1	TAQGAAALSR	TAQGAAALSR	2	TAQGAAALSR2	32280.9	15955.6	19437.9
Q6P9U8	Q6P9U8	EIF3H_RAT	Eif3h	Eukaryotic translation initiation factor 3 subunit H	1	TAQGSLSLK	TAQGSLSLK	2	TAQGSLSLK2	190626	177192	169039
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	TAQIMFQAYGDK	TAQIMFQAYGDK	2	TAQIMFQAYGDK2	2649.87	3862.6	
D3Z8I2	D3Z8I2	D3Z8I2_RAT	Susd3	Sushi domain containing 3	1	TAQLWYQLR	TAQLWYQLR	2	TAQLWYQLR2	111882	141556	128656
D4A2C6	D4A2C6	D4A2C6_RAT	Lsm4	U6 snRNA-associated Sm-like protein LSm4	1	TAQNHPMLVELK	TAQNHPMLVELK	3	TAQNHPMLVELK3	31378.7	26363.3	31706.2
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	TAQNLSIFLGSFR	TAQNLSIFLGSFR	2	TAQNLSIFLGSFR2	81766.4	86976.1	84329.8
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	TAQNLSIFLGSFR	TAQNLSIFLGSFR	3	TAQNLSIFLGSFR3	30996.6	25672.8	26173.6
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	TAQPPEPEVNLQR	TAQPPEPEVNLQR	2	TAQPPEPEVNLQR2	253899	244298	252104
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	TAQPPEPEVNLQR	TAQPPEPEVNLQR	3	TAQPPEPEVNLQR3	14626	9781.69	18704
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	TAQTSICR	TAQTSIC(UniMod:4)R	2	TAQTSIC(UniMod:4)R2		13898.8	4410.65
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	TAQVCSVASLLLDPYYR	TAQVC(UniMod:4)SVASLLLDPYYR	2	TAQVC(UniMod:4)SVASLLLDPYYR2	11423.2	9261.34	17437.1
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	TAQVCSVASLLLDPYYR	TAQVC(UniMod:4)SVASLLLDPYYR	3	TAQVC(UniMod:4)SVASLLLDPYYR3	13382.9	15890.1	15596.5
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	TAQVGGGFTGQDADK	TAQVGGGFTGQDADK	2	TAQVGGGFTGQDADK2	12994.4	19610.9	15228.1
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	TAREDLEPVVK	TAREDLEPVVK	3	TAREDLEPVVK3	26763.7	25535.9	27826
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	TARPFGAPPPTDSALSQNGQLLR	TARPFGAPPPTDSALSQNGQLLR	3	TARPFGAPPPTDSALSQNGQLLR3	36334.2	26945.5	34865.2
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	TASAEEIK	TASAEEIK	2	TASAEEIK2		27811.6	
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	TASAGKPLQDR	TASAGKPLQDR	2	TASAGKPLQDR2	6996.68		8366.38
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	TASAGKPLQDR	TASAGKPLQDR	3	TASAGKPLQDR3	60796.8		65409
Q6P6S2	Q6P6S2	S39AB_RAT	Slc39a11	Zinc transporter ZIP11	1	TASATFESAR	TASATFESAR	2	TASATFESAR2	14363.9	18383	16692.5
A0A8I5ZQG6	A0A8I5ZQG6	A0A8I5ZQG6_RAT	Sez6l2	Seizure related 6 homolog like 2	1	TASDAGFPVGSHVQYR	TASDAGFPVGSHVQYR	3	TASDAGFPVGSHVQYR3	13691.7	18019.7	20752.9
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	TASDFISK	TASDFISK	1	TASDFISK1	34973.1	32980.9	38472.1
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	TASDFISK	TASDFISK	2	TASDFISK2	3.59014e+06	3.3982e+06	3.83291e+06
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	TASDMVSTSR	TASDMVSTSR	2	TASDMVSTSR2	178245	152048	184962
P11507	Q64578;P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	0	TASEMVLADDNFSTIVAAVEEGR	TASEMVLADDNFSTIVAAVEEGR	3	TASEMVLADDNFSTIVAAVEEGR3	89528.9	117622	110469
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	TASEPSAQLSYASTGR	TASEPSAQLSYASTGR	2	TASEPSAQLSYASTGR2	28564.3	34131.2	19628.4
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	TASFSESR	TASFSESR	2	TASFSESR2	59362.2	42483.2	43508.9
D3ZSY8	D3ZSY8	D3ZSY8_RAT	Tbc1d10b	TBC1 domain family, member 10b	1	TASGALTAKPPLAPKPGTTVASGVTAR	TASGALTAKPPLAPKPGTTVASGVTAR	4	TASGALTAKPPLAPKPGTTVASGVTAR4	47831.5	52410.9	40359.2
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	TASGDDACNLTSFR	TASGDDAC(UniMod:4)NLTSFR	2	TASGDDAC(UniMod:4)NLTSFR2	7291.16	5466.87	11156.2
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	TASGDDACNLTSFRPATLTVANFFK	TASGDDAC(UniMod:4)NLTSFRPATLTVANFFK	3	TASGDDAC(UniMod:4)NLTSFRPATLTVANFFK3	20249.1	17727.4	28936.5
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	TASGDYIDSSWELR	TASGDYIDSSWELR	2	TASGDYIDSSWELR2	564826	507060	503143
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	TASGDYIDSSWELR	TASGDYIDSSWELR	3	TASGDYIDSSWELR3	7227.75	7026.17	3537.87
A0A8I5ZQG6	A0A8I5ZQG6	A0A8I5ZQG6_RAT	Sez6l2	Seizure related 6 homolog like 2	1	TASHGDLIR	TASHGDLIR	2	TASHGDLIR2	4261.22	6807.2	7849.9
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	TASNIGGFNAAIK	TASNIGGFNAAIK	2	TASNIGGFNAAIK2	67779	72874.8	69863.1
Q6P791	Q6P791	LTOR1_RAT	Lamtor1	Ragulator complex protein LAMTOR1	1	TASNIIDVSAADSQGMEQHEYMDR	TASNIIDVSAADSQGMEQHEYMDR	3	TASNIIDVSAADSQGMEQHEYMDR3	29876.9	25241.3	28168.4
P05712	P05712	RAB2A_RAT	Rab2a	Ras-related protein Rab-2A	1	TASNVEEAFINTAK	TASNVEEAFINTAK	2	TASNVEEAFINTAK2	295394	260747	302271
P05712	P05712	RAB2A_RAT	Rab2a	Ras-related protein Rab-2A	1	TASNVEEAFINTAK	TASNVEEAFINTAK	3	TASNVEEAFINTAK3	13026.1	26795.3	18053.3
O88618	O88618	FTCD_RAT	Ftcd	Formimidoyltransferase-cyclodeaminase	1	TASQLIDMR	TASQLIDMR	2	TASQLIDMR2	3301.96	14713.3	10076.6
D3ZJD8	D3ZJD8	D3ZJD8_RAT	Clec1b	C-type lectin domain family 1 member B	1	TASQSTLK	TASQSTLK	1	TASQSTLK1			2155.19
D3ZJD8	D3ZJD8	D3ZJD8_RAT	Clec1b	C-type lectin domain family 1 member B	1	TASQSTLK	TASQSTLK	2	TASQSTLK2	978505		696282
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	TASQVHLMK	TASQVHLMK	2	TASQVHLMK2	3230.92		
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	TASSVIELTCAK	TASSVIELTC(UniMod:4)AK	2	TASSVIELTC(UniMod:4)AK2	23150	22399.1	24160.5
G3V7N0	G3V7N0	G3V7N0_RAT	Hs2st1	Heparan sulfate 2-O-sulfotransferase 1	1	TASTSFTNIAYDLCAK	TASTSFTNIAYDLC(UniMod:4)AK	2	TASTSFTNIAYDLC(UniMod:4)AK2	11836.1		2799.81
Q5U303	Q5U303	TAB2_RAT	Tab2	TGF-beta-activated kinase 1 and MAP3K7-binding protein 2	1	TASTSSLVNSQTLNR	TASTSSLVNSQTLNR	2	TASTSSLVNSQTLNR2	4483.22	3141.97	3788.02
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	TASVEYLQEMAR	TASVEYLQEMAR	2	TASVEYLQEMAR2	10600.7	21685.7	4178.24
A0A0G2JYX9	A0A0G2JYX9	A0A0G2JYX9_RAT	Irak1	Interleukin-1 receptor-associated kinase 1	1	TASVLWPWINR	TASVLWPWINR	2	TASVLWPWINR2	9053.99	10976.8	12340.6
A0A8I6GAE6	A0A8I6GAE6	A0A8I6GAE6_RAT	Ddx19b	RNA helicase	1	TASWLAAELSK	TASWLAAELSK	2	TASWLAAELSK2	6949.03	10468.8	14141.4
B4F767	B4F767	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	1	TATATGEQSPGAR	TATATGEQSPGAR	2	TATATGEQSPGAR2			8194.47
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	TATDEAYKDPSNLQGK	TATDEAYKDPSNLQGK	2	TATDEAYKDPSNLQGK2	72186.7	70446.1	77504.8
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	TATDEAYKDPSNLQGK	TATDEAYKDPSNLQGK	3	TATDEAYKDPSNLQGK3	924613	1.05121e+06	1.01203e+06
D3ZYT9	D3ZYT9	D3ZYT9_RAT	Fbxl8	F-box and leucine-rich repeat protein 8	1	TATELLTALASR	TATELLTALASR	2	TATELLTALASR2	3744.22	5967.71	
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	TATGLLYIIETQK	TATGLLYIIETQK	2	TATGLLYIIETQK2	20931.9	32545.8	32036
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	TATGLLYIIETQK	TATGLLYIIETQK	3	TATGLLYIIETQK3	3415.61	5605.48	2977.72
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	TATGLTHIIETR	TATGLTHIIETR	2	TATGLTHIIETR2	3175.95		3610.57
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	TATGLTHIIETR	TATGLTHIIETR	3	TATGLTHIIETR3	31772.9	25033.9	34098.2
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	TATGVQGK	TATGVQGK	1	TATGVQGK1			3503.77
Q63448	Q63448	ACOX3_RAT	Acox3	Peroxisomal acyl-coenzyme A oxidase 3	1	TATHAVVFAQLYTPDGQCR	TATHAVVFAQLYTPDGQC(UniMod:4)R	3	TATHAVVFAQLYTPDGQC(UniMod:4)R3	2207.68	967.542	2743.07
P28648	P28648	CD63_RAT	Cd63	CD63 antigen	1	TATILDK	TATILDK	1	TATILDK1	9532.85	6325.94	8966.14
P28648	P28648	CD63_RAT	Cd63	CD63 antigen	1	TATILDK	TATILDK	2	TATILDK2			163591
F1LM66	F1LM66	F1LM66_RAT	Eftud2	116 kDa U5 small nuclear ribonucleoprotein component	1	TATITEPR	TATITEPR	2	TATITEPR2	10047	12643.2	5924.95
D3ZYB4	D3ZYB4	D3ZYB4_RAT	Lpin2	phosphatidate phosphatase	1	TATITPSENTHFR	TATITPSENTHFR	3	TATITPSENTHFR3	23536.6	22194.1	20196.8
E9PSY0	E9PSY0	E9PSY0_RAT	Axl	receptor protein-tyrosine kinase	1	TATITVLPQRPHNLHVVSR	TATITVLPQRPHNLHVVSR	3	TATITVLPQRPHNLHVVSR3	4765.3	1604.64	3402.16
E9PSY0	E9PSY0	E9PSY0_RAT	Axl	receptor protein-tyrosine kinase	1	TATITVLPQRPHNLHVVSR	TATITVLPQRPHNLHVVSR	4	TATITVLPQRPHNLHVVSR4	27616.8	21862.2	21331.4
A0A8I6AD67	A0A8I6AD67	A0A8I6AD67_RAT	Parp9	Poly [ADP-ribose] polymerase	1	TATLEVK	TATLEVK	2	TATLEVK2	97422.2	128455	
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	TATMLCAAGGNPDPEISWFK	TATMLC(UniMod:4)AAGGNPDPEISWFK	3	TATMLC(UniMod:4)AAGGNPDPEISWFK3	2638.71	5176.75	3859.96
Q64605	Q64605;A0A8I6A1V1	PTPRS_RAT	Ptprs	Receptor-type tyrosine-protein phosphatase S	0	TATMLCAASGNPDPEITWFK	TATMLC(UniMod:4)AASGNPDPEITWFK	3	TATMLC(UniMod:4)AASGNPDPEITWFK3	4776.66	7017.23	
D3ZR63	D3ZR63	D3ZR63_RAT	Gfod1	Glucose-fructose oxidoreductase domain containing 1	1	TATPLDAFR	TATPLDAFR	2	TATPLDAFR2	10141.4	15295	6113.42
P48500	A0A0G2JWU1;A0A8I5ZVI4;P48500	TPIS_RAT	Tpi1	Triosephosphate isomerase	0	TATPQQAQEVHEK	TATPQQAQEVHEK	2	TATPQQAQEVHEK2	13352.6		35048.9
P48500	A0A0G2JWU1;A0A8I5ZVI4;P48500	TPIS_RAT	Tpi1	Triosephosphate isomerase	0	TATPQQAQEVHEK	TATPQQAQEVHEK	3	TATPQQAQEVHEK3	130103		141925
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	TATQFWR	TATQFWR	2	TATQFWR2	481826	458816	451713
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	TATQLAVNK	TATQLAVNK	1	TATQLAVNK1	6524.41	7315.75	1826.33
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	TATQLAVNK	TATQLAVNK	2	TATQLAVNK2	444266	472206	494073
D4A4H5	D4A4H5	D4A4H5_RAT	Sdf2	Stromal cell derived factor 2	1	TATVCER	TATVC(UniMod:4)ER	2	TATVC(UniMod:4)ER2			16489.7
Q5HZW7	Q5HZW7	PLET1_RAT	Plet1	Placenta-expressed transcript 1 protein	1	TATVSSVK	TATVSSVK	2	TATVSSVK2	104136	123661	129571
Q8VHF0	Q8VHF0	MARK3_RAT	Mark3	MAP/microtubule affinity-regulating kinase 3	1	TATYNGPPASPSLSHEATPLSQTR	TATYNGPPASPSLSHEATPLSQTR	3	TATYNGPPASPSLSHEATPLSQTR3	2875.84	578.155	
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	TAVADNLLFYLGSAK	TAVADNLLFYLGSAK	2	TAVADNLLFYLGSAK2	14393.8	15826.9	8398.65
Q05962	A0A8I6G2T3;Q05962;D3ZB81;Q09073	ADT1_RAT	Slc25a4	ADP/ATP translocase 1	0	TAVAPIER	TAVAPIER	2	TAVAPIER2	3.23026e+06	3.72015e+06	3.75965e+06
P0C546	P0C546	S2542_RAT	Slc25a42	Mitochondrial coenzyme A transporter SLC25A42	1	TAVAPLDR	TAVAPLDR	2	TAVAPLDR2	12110.6	15009.2	15475
A0A8I6A1H4	A0A8I6A1H4	A0A8I6A1H4_RAT	Tmppe	Transmembrane protein with metallophosphoesterase domain	1	TAVAPLGQLR	TAVAPLGQLR	2	TAVAPLGQLR2	55879.6	63559.8	64081
P85108	P69897;Q6P9T8;B4F7C2;P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	TAVCDIPPR	TAVC(UniMod:4)DIPPR	2	TAVC(UniMod:4)DIPPR2	2.12825e+06	2.08561e+06	2.1292e+06
Q9ES58	Q9ES58;D3ZJX0	MO2R1_RAT	Cd200r1	Cell surface glycoprotein CD200 receptor 1	0	TAVCEAIAGK	TAVC(UniMod:4)EAIAGK	2	TAVC(UniMod:4)EAIAGK2	68529.5	42811.8	52985.1
Q9ES58	Q9ES58	MO2R1_RAT	Cd200r1	Cell surface glycoprotein CD200 receptor 1	1	TAVCEAIAGKPAAQISWTPDGDCVAK	TAVC(UniMod:4)EAIAGKPAAQISWTPDGDC(UniMod:4)VAK	3	TAVC(UniMod:4)EAIAGKPAAQISWTPDGDC(UniMod:4)VAK3	36238.6	36485.9	38875.2
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	TAVCLCK	TAVC(UniMod:4)LC(UniMod:4)K	2	TAVC(UniMod:4)LC(UniMod:4)K2	37967.9	48447.1	59040.8
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	TAVCNLYPGVFTTVEMLPSR	TAVC(UniMod:4)NLYPGVFTTVEMLPSR	3	TAVC(UniMod:4)NLYPGVFTTVEMLPSR3	100401	99576.2	90162.2
D3ZIF6	D3ZIF6	D3ZIF6_RAT	LOC100360095	Urinary protein 1-like	1	TAVCYAHPGEVCASVLTYK	TAVC(UniMod:4)YAHPGEVC(UniMod:4)ASVLTYK	3	TAVC(UniMod:4)YAHPGEVC(UniMod:4)ASVLTYK3	128372	90949.3	112231
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	TAVEHAADEDILAK	TAVEHAADEDILAK	2	TAVEHAADEDILAK2	3867.08	3590.86	591.521
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	TAVEHAADEDILAK	TAVEHAADEDILAK	3	TAVEHAADEDILAK3	62705.4	60351.5	62545
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	TAVETAVLLLR	TAVETAVLLLR	2	TAVETAVLLLR2	245125	232827	215691
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	TAVETAVLLLR	TAVETAVLLLR	3	TAVETAVLLLR3	7557.09	8836.67	9155.42
Q641Y0	Q641Y0	OST48_RAT	Ddost	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit	1	TAVIDHHNYDVSDLGQHTLIVADTENLLK	TAVIDHHNYDVSDLGQHTLIVADTENLLK	4	TAVIDHHNYDVSDLGQHTLIVADTENLLK4	42272.2	26129.6	30101.3
A0A8I6AMS6	A0A8I6AMS6	A0A8I6AMS6_RAT	Rangap1	RAN GTPase activating protein 1	1	TAVLDAIDALMK	TAVLDAIDALMK	2	TAVLDAIDALMK2	13827.4	10652.9	23535.7
Q68FW4	Q68FW4	STX18_RAT	Stx18	Syntaxin-18	1	TAVLDFVEDYLK	TAVLDFVEDYLK	2	TAVLDFVEDYLK2	5261.67	9332.52	8745.18
Q68FW4	Q68FW4	STX18_RAT	Stx18	Syntaxin-18	1	TAVLDFVEDYLKR	TAVLDFVEDYLKR	3	TAVLDFVEDYLKR3	3660.8	5094.01	8291.56
P06214	P06214	HEM2_RAT	Alad	Delta-aminolevulinic acid dehydratase	1	TAVLESMTAFR	TAVLESMTAFR	2	TAVLESMTAFR2	30406.4	17705.8	28498.9
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	TAVLTLIR	TAVLTLIR	2	TAVLTLIR2	404284	366051	330175
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	TAVPCLFALAVQASVPEK	TAVPC(UniMod:4)LFALAVQASVPEK	2	TAVPC(UniMod:4)LFALAVQASVPEK2	13733.1	21610.6	13640.8
D3ZLU1	D3ZLU1	D3ZLU1_RAT	Extl1	Exostosin-like glycosyltransferase 1	1	TAVPLTVIEGHR	TAVPLTVIEGHR	3	TAVPLTVIEGHR3	4464.99	1910.81	2554.41
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	TAVSAQLR	TAVSAQLR	2	TAVSAQLR2	253655	316003	369938
A0A8I6AI94	A0A8I6AI94	A0A8I6AI94_RAT	Dcun1d1	DCN1-like protein	1	TAVSCLSQNDWK	TAVSC(UniMod:4)LSQNDWK	2	TAVSC(UniMod:4)LSQNDWK2	14957.1	14641.8	11366.1
P09215	P09215	KPCD_RAT	Prkcd	Protein kinase C delta type	1	TAVSGNDIPDNNGTYGK	TAVSGNDIPDNNGTYGK	2	TAVSGNDIPDNNGTYGK2	4868.72	5687.85	6352.93
A0A8I5ZTQ0	A0A8I5ZTQ0	A0A8I5ZTQ0_RAT	Mydgf	Myeloid-derived growth factor	1	TAVSHRPGAFK	TAVSHRPGAFK	3	TAVSHRPGAFK3	55410.1		78900.8
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	TAVTAAGTPCQEWAAQEPHSHR	TAVTAAGTPC(UniMod:4)QEWAAQEPHSHR	3	TAVTAAGTPC(UniMod:4)QEWAAQEPHSHR3	415985	269692	301191
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	TAVTAAGTPCQEWAAQEPHSHR	TAVTAAGTPC(UniMod:4)QEWAAQEPHSHR	4	TAVTAAGTPC(UniMod:4)QEWAAQEPHSHR4	632375	647685	618139
F7FI79	F7FI79	F7FI79_RAT	Fhip2b	FHF complex subunit HOOK interacting protein 2B	1	TAVTEIVNSFLCLVPEEAK	TAVTEIVNSFLC(UniMod:4)LVPEEAK	3	TAVTEIVNSFLC(UniMod:4)LVPEEAK3	3868.28		
A0A8I6AQR3	A0A8I6AQR3	A0A8I6AQR3_RAT	Tmem263	Transmembrane protein 263	1	TAVTTVPSMGIGLVK	TAVTTVPSMGIGLVK	2	TAVTTVPSMGIGLVK2	63811.8	65356.4	66426.3
A0A8I6AQR3	A0A8I6AQR3	A0A8I6AQR3_RAT	Tmem263	Transmembrane protein 263	1	TAVTTVPSMGIGLVK	TAVTTVPSMGIGLVK	3	TAVTTVPSMGIGLVK3	14418.6	14521.5	18226.1
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	TAVVGAVYR	TAVVGAVYR	2	TAVVGAVYR2	30990.2	31636.6	17044.1
P12001	P12001	RL18_RAT	Rpl18	Large ribosomal subunit protein eL18	1	TAVVVGTITDDVR	TAVVVGTITDDVR	2	TAVVVGTITDDVR2	58083.2	46229.2	44571.3
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	TAWTQEIEPGDAGVSRPEAEAPR	TAWTQEIEPGDAGVSRPEAEAPR	3	TAWTQEIEPGDAGVSRPEAEAPR3	104362	106598	100545
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	TAWVFDDK	TAWVFDDK	2	TAWVFDDK2	184848	170313	160888
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	TAWVFDDKYK	TAWVFDDKYK	2	TAWVFDDKYK2	30517	29124.1	25659.9
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	TAWVFDDKYK	TAWVFDDKYK	3	TAWVFDDKYK3	74731.9	69302.4	95731.7
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	TAYDVLK	TAYDVLK	2	TAYDVLK2	34027.1	28237.1	33561.4
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	TAYEWVNPAAYGLVVVTSSEGR	TAYEWVNPAAYGLVVVTSSEGR	3	TAYEWVNPAAYGLVVVTSSEGR3	2614.43	2762.84	
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	TAYGPNGMNK	TAYGPNGMNK	2	TAYGPNGMNK2	111650	64876.3	95869.1
A0A8I6AHQ9	A0A8I6AHQ9	A0A8I6AHQ9_RAT	Xpot	Exportin-T	1	TAYLFSR	TAYLFSR	2	TAYLFSR2	13155.7	18160	5850.26
Q3KR59	Q3KR59	UBP10_RAT	Usp10	Ubiquitin carboxyl-terminal hydrolase 10	1	TAYLLYYR	TAYLLYYR	2	TAYLLYYR2	7733.14	16034.1	15500.1
A0A0G2K264	A0A0G2K264	A0A0G2K264_RAT	Dap3	Death associated protein 3	1	TAYLPHELLGK	TAYLPHELLGK	3	TAYLPHELLGK3	11285.7	21118.9	8862.26
Q704S8	Q704S8	CACP_RAT	Crat	Carnitine O-acetyltransferase	1	TAYLQFR	TAYLQFR	2	TAYLQFR2	19311.1	15161.9	16091.9
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	TAYNLVHELR	TAYNLVHELR	3	TAYNLVHELR3	68334.5	74646.6	75266.8
Q07977	Q07977;A1KQY6	SIA8B_RAT	St8sia2	Alpha-2,8-sialyltransferase 8B	0	TAYPSLR	TAYPSLR	2	TAYPSLR2	87912.3	86999	80437.7
E9PU03	E9PU03	E9PU03_RAT	Smg5	Nonsense-mediated mRNA decay factor	1	TAYQEVFKPENVSLR	TAYQEVFKPENVSLR	3	TAYQEVFKPENVSLR3		13214.6	9908.77
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	TAYSCYGTVSSLNGEPEQGVAVEAVGQK	TAYSC(UniMod:4)YGTVSSLNGEPEQGVAVEAVGQK	3	TAYSC(UniMod:4)YGTVSSLNGEPEQGVAVEAVGQK3	6819.61	7071.45	
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	TAYSDAIPEDALPGK	TAYSDAIPEDALPGK	2	TAYSDAIPEDALPGK2	58592	66082.8	58678.9
Q3B7D0	Q3B7D0	HEM6_RAT	Cpox	Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial	1	TCAEAVVPSYVPIVK	TC(UniMod:4)AEAVVPSYVPIVK	2	TC(UniMod:4)AEAVVPSYVPIVK2	4965.52	6223.83	5657.86
Q5PQJ7	Q5PQJ7	TBCEL_RAT	Tbcel	Tubulin-specific chaperone cofactor E-like protein	1	TCAGSFSGVR	TC(UniMod:4)AGSFSGVR	2	TC(UniMod:4)AGSFSGVR2	3595.22		4294.74
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	TCAILCHIYHHALHSR	TC(UniMod:4)AILC(UniMod:4)HIYHHALHSR	3	TC(UniMod:4)AILC(UniMod:4)HIYHHALHSR3	15611.4	5123.02	5495.44
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	TCAILCHIYHHALHSR	TC(UniMod:4)AILC(UniMod:4)HIYHHALHSR	4	TC(UniMod:4)AILC(UniMod:4)HIYHHALHSR4	29742.9	30569.7	15124
A0A8I6APP3	A0A8I6APP3	A0A8I6APP3_RAT	Plekho2	Pleckstrin homology domain containing O2	1	TCALEHVTR	TC(UniMod:4)ALEHVTR	2	TC(UniMod:4)ALEHVTR2	28129.9	23934.5	22216.2
A0A8I5Y224	A0A8I5Y224	A0A8I5Y224_RAT	Adam9	ADAM metallopeptidase domain 9	1	TCATGNALCGK	TC(UniMod:4)ATGNALC(UniMod:4)GK	2	TC(UniMod:4)ATGNALC(UniMod:4)GK2	6412.64	9154.14	11109.3
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	TCATVTIGGINIAEALVSK	TC(UniMod:4)ATVTIGGINIAEALVSK	2	TC(UniMod:4)ATVTIGGINIAEALVSK2	45585.5	32792.8	38293.1
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	TCATVTIGGINIAEALVSK	TC(UniMod:4)ATVTIGGINIAEALVSK	3	TC(UniMod:4)ATVTIGGINIAEALVSK3	12904.4	4803.88	9171.98
A1KQY6	A1KQY6	A1KQY6_RAT	St8sia4	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	1	TCAVVGNSGILLDSGCGK	TC(UniMod:4)AVVGNSGILLDSGC(UniMod:4)GK	2	TC(UniMod:4)AVVGNSGILLDSGC(UniMod:4)GK2	8092.51	6313.8	5045.98
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	TCAWIHDSSLSASCK	TC(UniMod:4)AWIHDSSLSASC(UniMod:4)K	2	TC(UniMod:4)AWIHDSSLSASC(UniMod:4)K2	4401.73	2249.33	
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	TCAWIHDSSLSASCK	TC(UniMod:4)AWIHDSSLSASC(UniMod:4)K	3	TC(UniMod:4)AWIHDSSLSASC(UniMod:4)K3	34379.2	25615.9	19660.4
P09812	P53534;P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	0	TCAYTNHTVLPEALER	TC(UniMod:4)AYTNHTVLPEALER	3	TC(UniMod:4)AYTNHTVLPEALER3	42497.7	49755.6	41481
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	TCDALQAK	TC(UniMod:4)DALQAK	2	TC(UniMod:4)DALQAK2	66155.2	52850.6	85970.1
Q5EB77	A0A8I5ZQR4;Q5EB77	RAB18_RAT	Rab18	Ras-related protein Rab-18	0	TCDGVQCAFEELVEK	TC(UniMod:4)DGVQC(UniMod:4)AFEELVEK	2	TC(UniMod:4)DGVQC(UniMod:4)AFEELVEK2	68121.3	49348.1	55251.9
Q5EB77	A0A8I5ZQR4;Q5EB77	RAB18_RAT	Rab18	Ras-related protein Rab-18	0	TCDGVQCAFEELVEK	TC(UniMod:4)DGVQC(UniMod:4)AFEELVEK	3	TC(UniMod:4)DGVQC(UniMod:4)AFEELVEK3	8251.27	12423.9	12586.4
B0BNN4	B0BNN4	B0BNN4_RAT	Cfp	Complement factor properdin	1	TCDHPVPR	TC(UniMod:4)DHPVPR	2	TC(UniMod:4)DHPVPR2			19308.2
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	TCDIKDPSQNINWVVPEGGGGPAYNGM	TC(UniMod:4)DIKDPSQNINWVVPEGGGGPAYNGM	3	TC(UniMod:4)DIKDPSQNINWVVPEGGGGPAYNGM3	5606.42	7621.34	8736
A0A8I6A6H8	A0A8I6A6H8	A0A8I6A6H8_RAT	Serpinb6a	Serpin family B member 6A	1	TCDILASFK	TC(UniMod:4)DILASFK	2	TC(UniMod:4)DILASFK2	420566	403409	424624
A0A8I5ZYZ8	A0A8I5ZYZ8	A0A8I5ZYZ8_RAT	Ube2m	Ubiquitin-conjugating enzyme E2M	1	TCDISFSDPDDLLNFK	TC(UniMod:4)DISFSDPDDLLNFK	2	TC(UniMod:4)DISFSDPDDLLNFK2	14801.9	8340.22	15516.5
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	TCDVQGLEHDMEEVNTR	TC(UniMod:4)DVQGLEHDMEEVNTR	3	TC(UniMod:4)DVQGLEHDMEEVNTR3	51681.2	43848.1	27438.9
Q5PQQ8	Q5PQQ8	ITGBL_RAT	Itgbl1	Integrin beta-like protein 1	1	TCECDDRRCEDLDGVVCGGR	TC(UniMod:4)EC(UniMod:4)DDRRC(UniMod:4)EDLDGVVC(UniMod:4)GGR	4	TC(UniMod:4)EC(UniMod:4)DDRRC(UniMod:4)EDLDGVVC(UniMod:4)GGR4	3049.17	6700.55	1714.59
Q6V0K7	Q6V0K7	OIT3_RAT	Oit3	Oncoprotein-induced transcript 3 protein	1	TCEDIEGCHSNNGGCSHSCLGSEK	TC(UniMod:4)EDIEGC(UniMod:4)HSNNGGC(UniMod:4)SHSC(UniMod:4)LGSEK	3	TC(UniMod:4)EDIEGC(UniMod:4)HSNNGGC(UniMod:4)SHSC(UniMod:4)LGSEK3	4626.08	2625.34	
Q6V0K7	Q6V0K7	OIT3_RAT	Oit3	Oncoprotein-induced transcript 3 protein	1	TCEDIEGCHSNNGGCSHSCLGSEK	TC(UniMod:4)EDIEGC(UniMod:4)HSNNGGC(UniMod:4)SHSC(UniMod:4)LGSEK	4	TC(UniMod:4)EDIEGC(UniMod:4)HSNNGGC(UniMod:4)SHSC(UniMod:4)LGSEK4	2769.02	2760.11	
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	TCEEHQLCVVAVLPHILDTGATGR	TC(UniMod:4)EEHQLC(UniMod:4)VVAVLPHILDTGATGR	3	TC(UniMod:4)EEHQLC(UniMod:4)VVAVLPHILDTGATGR3	211473	280638	243259
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	TCEEHQLCVVAVLPHILDTGATGR	TC(UniMod:4)EEHQLC(UniMod:4)VVAVLPHILDTGATGR	4	TC(UniMod:4)EEHQLC(UniMod:4)VVAVLPHILDTGATGR4	572730	647058	620644
F1LWZ3	F1LWZ3	F1LWZ3_RAT	Rhbdf2	Inactive rhomboid protein	1	TCEEPASSGAHIWPDDITK	TC(UniMod:4)EEPASSGAHIWPDDITK	3	TC(UniMod:4)EEPASSGAHIWPDDITK3	15844.4	24621.4	5439.44
E9PU42	E9PU42	E9PU42_RAT	Vps26c	VPS26 endosomal protein sorting factor C	1	TCEFIVHSAPQK	TC(UniMod:4)EFIVHSAPQK	3	TC(UniMod:4)EFIVHSAPQK3	13263.8	11810.5	3791.22
Q8K4V4	Q8K4V4	SNX27_RAT	Snx27	Sorting nexin-27	1	TCEGYNEIIFPHCACDSR	TC(UniMod:4)EGYNEIIFPHC(UniMod:4)AC(UniMod:4)DSR	3	TC(UniMod:4)EGYNEIIFPHC(UniMod:4)AC(UniMod:4)DSR3	7616.27	9179.78	6720.07
P47824	P47824	P2RX1_RAT	P2rx1	P2X purinoceptor 1	1	TCEIFGWCPVEVDDK	TC(UniMod:4)EIFGWC(UniMod:4)PVEVDDK	2	TC(UniMod:4)EIFGWC(UniMod:4)PVEVDDK2	7789.26		4465.24
P47824	P47824	P2RX1_RAT	P2rx1	P2X purinoceptor 1	1	TCEIFGWCPVEVDDKIPSPALLR	TC(UniMod:4)EIFGWC(UniMod:4)PVEVDDKIPSPALLR	3	TC(UniMod:4)EIFGWC(UniMod:4)PVEVDDKIPSPALLR3	129641	165871	132115
Q6AYF8	Q6AYF8	Q6AYF8_RAT	Serpinb9	Serpin family B member 9	1	TCELLPTYK	TC(UniMod:4)ELLPTYK	2	TC(UniMod:4)ELLPTYK2	46314.6	42092.1	47014.7
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	TCESLGAGGYR	TC(UniMod:4)ESLGAGGYR	2	TC(UniMod:4)ESLGAGGYR2	132030	116222	123686
A0A8I6A4K6	A0A8I6A4K6	A0A8I6A4K6_RAT	Psmg1	Proteasome assembly chaperone 1	1	TCESTYNLSSPFLR	TC(UniMod:4)ESTYNLSSPFLR	2	TC(UniMod:4)ESTYNLSSPFLR2	4579.22	3907.48	2965.5
A0A8I6AHQ9	A0A8I6AHQ9	A0A8I6AHQ9_RAT	Xpot	Exportin-T	1	TCFIILSK	TC(UniMod:4)FIILSK	2	TC(UniMod:4)FIILSK2	5052.56	2487.8	
D4A0G7	D4A0G7	D4A0G7_RAT	Rab37	RAB37, member RAS oncogene family	1	TCFLIQFK	TC(UniMod:4)FLIQFK	2	TC(UniMod:4)FLIQFK2	28476.2	16774.1	18141.7
D4AC36	D4AC36	D4AC36_RAT	Eif3f	Eukaryotic translation initiation factor 3 subunit F	1	TCFSPNR	TC(UniMod:4)FSPNR	2	TC(UniMod:4)FSPNR2	259855	239568	251440
F1LM66	F1LM66	F1LM66_RAT	Eftud2	116 kDa U5 small nuclear ribonucleoprotein component	1	TCFVDCLIEQTHPEIR	TC(UniMod:4)FVDC(UniMod:4)LIEQTHPEIR	3	TC(UniMod:4)FVDC(UniMod:4)LIEQTHPEIR3	7204.46	4843.2	
A0A8I6GBD2	A0A8I6GBD2	A0A8I6GBD2_RAT	Actr10	Actin related protein 10	1	TCFVSDLQR	TC(UniMod:4)FVSDLQR	2	TC(UniMod:4)FVSDLQR2	143070	147465	145889
B0BNA7	B0BNA7	EIF3I_RAT	Eif3i	Eukaryotic translation initiation factor 3 subunit I	1	TCGFDFGGNIIMFSTDK	TC(UniMod:4)GFDFGGNIIMFSTDK	2	TC(UniMod:4)GFDFGGNIIMFSTDK2	5441.86	10813	9613.91
P00507	A0A8I6GJD2;P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	0	TCGFDFSGALEDISK	TC(UniMod:4)GFDFSGALEDISK	2	TC(UniMod:4)GFDFSGALEDISK2	49265.9	46752.6	47794.5
P00507	A0A8I6GJD2;P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	0	TCGFDFSGALEDISK	TC(UniMod:4)GFDFSGALEDISK	3	TC(UniMod:4)GFDFSGALEDISK3		1567.06	3578.02
Q3MHS7	Q3MHS7	Q3MHS7_RAT	Gmds	GDP-mannose 4,6-dehydratase	1	TCGLINSVK	TC(UniMod:4)GLINSVK	2	TC(UniMod:4)GLINSVK2	10755.7	7356.39	7469.26
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	TCGLPYVNLEFLK	TC(UniMod:4)GLPYVNLEFLK	2	TC(UniMod:4)GLPYVNLEFLK2	6859.07	10378.5	7921.42
D3ZSZ6	F1M5T2;D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	0	TCGSVLR	TC(UniMod:4)GSVLR	2	TC(UniMod:4)GSVLR2	413387	460582	440298
Q6V0K7	Q6V0K7	OIT3_RAT	Oit3	Oncoprotein-induced transcript 3 protein	1	TCGTVVDVVNDK	TC(UniMod:4)GTVVDVVNDK	2	TC(UniMod:4)GTVVDVVNDK2	89666.9	86263.3	88078.9
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	TCHIQECDK	TC(UniMod:4)HIQEC(UniMod:4)DK	2	TC(UniMod:4)HIQEC(UniMod:4)DK2			425243
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	TCHIQECDK	TC(UniMod:4)HIQEC(UniMod:4)DK	3	TC(UniMod:4)HIQEC(UniMod:4)DK3			3.06914e+06
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	TCHIQECDKR	TC(UniMod:4)HIQEC(UniMod:4)DKR	2	TC(UniMod:4)HIQEC(UniMod:4)DKR2			664996
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	TCHIQECDKR	TC(UniMod:4)HIQEC(UniMod:4)DKR	3	TC(UniMod:4)HIQEC(UniMod:4)DKR3			2.37657e+06
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	TCHSFIINEK	TC(UniMod:4)HSFIINEK	2	TC(UniMod:4)HSFIINEK2	13558.4	21962.3	11481.4
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	TCHSFIINEK	TC(UniMod:4)HSFIINEK	3	TC(UniMod:4)HSFIINEK3	144786	150650	136054
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	TCHSPAHSPCHIHAHCLFER	TC(UniMod:4)HSPAHSPC(UniMod:4)HIHAHC(UniMod:4)LFER	4	TC(UniMod:4)HSPAHSPC(UniMod:4)HIHAHC(UniMod:4)LFER4	1781.6	4856.18	
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	TCIAAIPR	TC(UniMod:4)IAAIPR	2	TC(UniMod:4)IAAIPR2	101033	98661.5	76215.6
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	TCIDVNECWISPGR	TC(UniMod:4)IDVNEC(UniMod:4)WISPGR	2	TC(UniMod:4)IDVNEC(UniMod:4)WISPGR2	375508	416463	366367
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	TCIDVNECWISPGR	TC(UniMod:4)IDVNEC(UniMod:4)WISPGR	3	TC(UniMod:4)IDVNEC(UniMod:4)WISPGR3	47085.4	60379.9	49793.3
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	TCIIWDLNK	TC(UniMod:4)IIWDLNK	2	TC(UniMod:4)IIWDLNK2	7465.61	6361.43	2972.89
D3Z8X6	D3Z8X6	D3Z8X6_RAT	Dtx3l	E3 ubiquitin-protein ligase	1	TCILFVPK	TC(UniMod:4)ILFVPK	2	TC(UniMod:4)ILFVPK2	8586.72	10309.1	6138.09
G3V8Y8	G3V8Y8	G3V8Y8_RAT	Hip1	Huntingtin interacting protein 1	1	TCILGTHHEK	TC(UniMod:4)ILGTHHEK	3	TC(UniMod:4)ILGTHHEK3	10112.4		
F7FMS0	F7FMS0	F7FMS0_RAT	Mst1	Macrophage stimulating 1	1	TCIMDNGASYR	TC(UniMod:4)IMDNGASYR	2	TC(UniMod:4)IMDNGASYR2	9518.62	3716.59	1110.02
Q02445	Q02445	TFPI1_RAT	Tfpi	Tissue factor pathway inhibitor	1	TCIPGYK	TC(UniMod:4)IPGYK	1	TC(UniMod:4)IPGYK1	35317.4	33195.7	36570.7
Q02445	Q02445	TFPI1_RAT	Tfpi	Tissue factor pathway inhibitor	1	TCIPGYK	TC(UniMod:4)IPGYK	2	TC(UniMod:4)IPGYK2	1.14961e+06	1.17137e+06	1.17511e+06
Q02445	Q02445	TFPI1_RAT	Tfpi	Tissue factor pathway inhibitor	1	TCIPGYKK	TC(UniMod:4)IPGYKK	2	TC(UniMod:4)IPGYKK2	33736.9	31220.7	27763.6
P70483	P70483	STRN_RAT	Strn	Striatin	1	TCIQEFTAHR	TC(UniMod:4)IQEFTAHR	2	TC(UniMod:4)IQEFTAHR2	24516.2	10757.5	21791.7
P70483	P70483	STRN_RAT	Strn	Striatin	1	TCIQEFTAHR	TC(UniMod:4)IQEFTAHR	3	TC(UniMod:4)IQEFTAHR3	109828	110707	121971
P70483	P70483	STRN_RAT	Strn	Striatin	1	TCIQEFTAHRK	TC(UniMod:4)IQEFTAHRK	3	TC(UniMod:4)IQEFTAHRK3	6388.64	13160.5	6977.78
P09760	P09760	FER_RAT	Fer	Tyrosine-protein kinase Fer	1	TCKEDLPQELK	TC(UniMod:4)KEDLPQELK	3	TC(UniMod:4)KEDLPQELK3	1187.65		
Q62918	Q62918	NELL2_RAT	Nell2	Protein kinase C-binding protein NELL2	1	TCLDEMNVVR	TC(UniMod:4)LDEMNVVR	2	TC(UniMod:4)LDEMNVVR2	3934.21	4825.88	3148.59
Q63054	Q63054	ICA69_RAT	Ica1	Islet cell autoantigen 1	1	TCLDLSK	TC(UniMod:4)LDLSK	2	TC(UniMod:4)LDLSK2	7722.35	9815.69	
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	TCLDNLASK	TC(UniMod:4)LDNLASK	2	TC(UniMod:4)LDNLASK2	37460.6	45407.9	51601.1
Q6AYB5	Q6AYB5	SRP54_RAT	Srp54	Signal recognition particle subunit SRP54	1	TCLICADTFR	TC(UniMod:4)LIC(UniMod:4)ADTFR	2	TC(UniMod:4)LIC(UniMod:4)ADTFR2	7039.22	12070.8	16516.7
Q1HAQ0	Q1HAQ0	PCAT1_RAT	Lpcat1	Lysophosphatidylcholine acyltransferase 1	1	TCLITFK	TC(UniMod:4)LITFK	2	TC(UniMod:4)LITFK2	13348.6	14497.1	20359.9
Q1HAQ0	Q1HAQ0	PCAT1_RAT	Lpcat1	Lysophosphatidylcholine acyltransferase 1	1	TCLITFKPGAFIPGVPVQPVVLR	TC(UniMod:4)LITFKPGAFIPGVPVQPVVLR	3	TC(UniMod:4)LITFKPGAFIPGVPVQPVVLR3	33102.5	76282.7	41683.3
Q32PX6	Q32PX6	Q32PX6_RAT	Rhog	Ras homolog family member G	1	TCLLICYTTNAFPK	TC(UniMod:4)LLIC(UniMod:4)YTTNAFPK	2	TC(UniMod:4)LLIC(UniMod:4)YTTNAFPK2	78587.7	79194.2	74703.3
Q8CFN2	Q8CFN2	CDC42_RAT	Cdc42	Cell division control protein 42 homolog	1	TCLLISYTTNK	TC(UniMod:4)LLISYTTNK	2	TC(UniMod:4)LLISYTTNK2	8429.27	7966.72	10453.9
P61589	P61589;P62747;Q5XIM3;A0A8I6AN62	RHOA_RAT	Rhoa	Transforming protein RhoA	0	TCLLIVFSK	TC(UniMod:4)LLIVFSK	2	TC(UniMod:4)LLIVFSK2	85427.6	78443.7	100407
M0R915	M0R915;A0A8I6GLQ4	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	0	TCLLMAVHTNR	TC(UniMod:4)LLMAVHTNR	3	TC(UniMod:4)LLMAVHTNR3	13892.5	14493.3	12387
P09606	P09606	GLNA_RAT	Glul	Glutamine synthetase	1	TCLLNETGDEPFQYKN	TC(UniMod:4)LLNETGDEPFQYKN	2	TC(UniMod:4)LLNETGDEPFQYKN2	4438.47	2996.03	2758.16
D3ZNV6	D3ZNV6	D3ZNV6_RAT	Elmod2	ELMO domain containing 2	1	TCLLQITGYR	TC(UniMod:4)LLQITGYR	2	TC(UniMod:4)LLQITGYR2	12560.4	7669.37	10728.9
D3ZLA3	D3ZLA3	D3ZLA3_RAT	Cpne3	Copine 3	1	TCLPQIR	TC(UniMod:4)LPQIR	2	TC(UniMod:4)LPQIR2	66380.3	65401.6	68632.5
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	TCLSDIVR	TC(UniMod:4)LSDIVR	2	TC(UniMod:4)LSDIVR2	20322.5	28239.4	18821.3
D3Z841	D3Z841	D3Z841_RAT	Btnl10	Butyrophilin like 10	1	TCLSPAEPLRR	TC(UniMod:4)LSPAEPLRR	3	TC(UniMod:4)LSPAEPLRR3	25886.7	30306.3	26424.8
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	TCMIATISPGMASCENTLNTLR	TC(UniMod:4)MIATISPGMASC(UniMod:4)ENTLNTLR	3	TC(UniMod:4)MIATISPGMASC(UniMod:4)ENTLNTLR3	73504.9	76396	89264.2
Q6IMY8	Q6IMY8	HNRPU_RAT	Hnrnpu	Heterogeneous nuclear ribonucleoprotein U	1	TCNCETEDYGEK	TC(UniMod:4)NC(UniMod:4)ETEDYGEK	2	TC(UniMod:4)NC(UniMod:4)ETEDYGEK2	22933.7	22334.8	16539.1
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	TCNCTLDIFK	TC(UniMod:4)NC(UniMod:4)TLDIFK	2	TC(UniMod:4)NC(UniMod:4)TLDIFK2	2409.12	6029.06	6101.86
Q9JJK4	Q9JJK4	PEX3_RAT	Pex3	Peroxisomal biogenesis factor 3	1	TCNMTVLSMLPTLR	TC(UniMod:4)NMTVLSMLPTLR	2	TC(UniMod:4)NMTVLSMLPTLR2		13357.5	10859
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	TCNNPFEFPR	TC(UniMod:4)NNPFEFPR	2	TC(UniMod:4)NNPFEFPR2	97432.9	90935.7	108205
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	TCNNPFEFPRK	TC(UniMod:4)NNPFEFPRK	3	TC(UniMod:4)NNPFEFPRK3	15335.8	20248.8	21835.2
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	TCNPLGR	TC(UniMod:4)NPLGR	2	TC(UniMod:4)NPLGR2	6695.64	14295.3	
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	TCNPVYK	TC(UniMod:4)NPVYK	2	TC(UniMod:4)NPVYK2	60482.7	69316.5	48395.5
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	TCNTNPHLNALSTDSACR	TC(UniMod:4)NTNPHLNALSTDSAC(UniMod:4)R	3	TC(UniMod:4)NTNPHLNALSTDSAC(UniMod:4)R3	25122.3	43407	31203.4
P18298	P18298;A0A8I6G8F2	METK2_RAT	Mat2a	S-adenosylmethionine synthase isoform type-2	0	TCNVLVALEQQSPDIAQGVHLDR	TC(UniMod:4)NVLVALEQQSPDIAQGVHLDR	3	TC(UniMod:4)NVLVALEQQSPDIAQGVHLDR3	3124.92	2366.38	8879.98
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	TCPFFFPFDTR	TC(UniMod:4)PFFFPFDTR	2	TC(UniMod:4)PFFFPFDTR2	7196.63	11065	15914.3
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	TCPLSWVQR	TC(UniMod:4)PLSWVQR	2	TC(UniMod:4)PLSWVQR2	33008.3	36839.1	44378.6
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	TCPSCGITFAPK	TC(UniMod:4)PSC(UniMod:4)GITFAPK	2	TC(UniMod:4)PSC(UniMod:4)GITFAPK2	63443.9	80128.8	48723.6
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	TCPTTKPGMLNVHLLPHTHDDVGWLK	TC(UniMod:4)PTTKPGMLNVHLLPHTHDDVGWLK	4	TC(UniMod:4)PTTKPGMLNVHLLPHTHDDVGWLK4	5631.02		
D3ZXJ5	D3ZXJ5	D3ZXJ5_RAT	Efl1	Elongation factor like GTPase 1	1	TCPVGDENQEQQDGYSEPFEETSQK	TC(UniMod:4)PVGDENQEQQDGYSEPFEETSQK	3	TC(UniMod:4)PVGDENQEQQDGYSEPFEETSQK3	1370.71	3450.32	
A0A0G2K0G9	A0A0G2K0G9	A0A0G2K0G9_RAT	Rin3	Ras and Rab interactor 3	1	TCPVWLQLGIGQAEAAK	TC(UniMod:4)PVWLQLGIGQAEAAK	3	TC(UniMod:4)PVWLQLGIGQAEAAK3	6635.48	3160.81	6229.85
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	TCPYVSFR	TC(UniMod:4)PYVSFR	2	TC(UniMod:4)PYVSFR2	1.27407e+06	1.27467e+06	1.36221e+06
O35568	O35568	FBLN3_RAT	Efemp1	EGF-containing fibulin-like extracellular matrix protein 1	1	TCQDINECETTNECR	TC(UniMod:4)QDINEC(UniMod:4)ETTNEC(UniMod:4)R	2	TC(UniMod:4)QDINEC(UniMod:4)ETTNEC(UniMod:4)R2	1180.7	3017.69	
O35568	O35568	FBLN3_RAT	Efemp1	EGF-containing fibulin-like extracellular matrix protein 1	1	TCQDINECETTNECREDEMCWNYHGGFR	TC(UniMod:4)QDINEC(UniMod:4)ETTNEC(UniMod:4)REDEMC(UniMod:4)WNYHGGFR	4	TC(UniMod:4)QDINEC(UniMod:4)ETTNEC(UniMod:4)REDEMC(UniMod:4)WNYHGGFR4	8279.47	11105.1	3127.1
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	TCQDVDECQQDR	TC(UniMod:4)QDVDEC(UniMod:4)QQDR	2	TC(UniMod:4)QDVDEC(UniMod:4)QQDR2	7958.69		39302.7
E9PU34	E9PU34	E9PU34_RAT	Rmnd1	Required for meiotic nuclear division 1 homolog	1	TCQFLSITR	TC(UniMod:4)QFLSITR	2	TC(UniMod:4)QFLSITR2	5758.79	9130.04	10032.9
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	TCQLLHSIFQYPK	TC(UniMod:4)QLLHSIFQYPK	3	TC(UniMod:4)QLLHSIFQYPK3	8673.2	6864.35	9078.34
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	TCQNGYQLTGYTYEK	TC(UniMod:4)QNGYQLTGYTYEK	2	TC(UniMod:4)QNGYQLTGYTYEK2	4503.78	5655.45	3953.43
Q5FVI6	Q5FVI6	VATC1_RAT	Atp6v1c1	V-type proton ATPase subunit C 1	1	TCQQTWEK	TC(UniMod:4)QQTWEK	2	TC(UniMod:4)QQTWEK2	8957.79		2717.61
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	TCRPDGGAPQLDTAR	TC(UniMod:4)RPDGGAPQLDTAR	2	TC(UniMod:4)RPDGGAPQLDTAR2	16141.9	14045.5	14392.6
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	TCRPDGGAPQLDTAR	TC(UniMod:4)RPDGGAPQLDTAR	3	TC(UniMod:4)RPDGGAPQLDTAR3	630622	702791	641482
Q09326	Q09326	MGAT2_RAT	Mgat2	Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	1	TCRPSTQSAQIESLLNNNK	TC(UniMod:4)RPSTQSAQIESLLNNNK	3	TC(UniMod:4)RPSTQSAQIESLLNNNK3	19107.2	19113.9	20431.5
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	TCRVECSGNLFTQR	TC(UniMod:4)RVEC(UniMod:4)SGNLFTQR	3	TC(UniMod:4)RVEC(UniMod:4)SGNLFTQR3	4278.89	7121.86	755.034
A0A8I5XWT0	A0A8I5XWT0	A0A8I5XWT0_RAT	Cd55	CD55 molecule (Cromer blood group)	1	TCSAPLR	TC(UniMod:4)SAPLR	2	TC(UniMod:4)SAPLR2	2.04727e+06	2.07809e+06	2.20392e+06
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	TCSCHEDYVLQPDEVSCKPK	TC(UniMod:4)SC(UniMod:4)HEDYVLQPDEVSC(UniMod:4)KPK	3	TC(UniMod:4)SC(UniMod:4)HEDYVLQPDEVSC(UniMod:4)KPK3	346450	246938	256587
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	TCSCHEDYVLQPDEVSCKPK	TC(UniMod:4)SC(UniMod:4)HEDYVLQPDEVSC(UniMod:4)KPK	4	TC(UniMod:4)SC(UniMod:4)HEDYVLQPDEVSC(UniMod:4)KPK4	738262	767213	784195
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	TCSECQELFWGDPDVECR	TC(UniMod:4)SEC(UniMod:4)QELFWGDPDVEC(UniMod:4)R	3	TC(UniMod:4)SEC(UniMod:4)QELFWGDPDVEC(UniMod:4)R3	28168.8	21981	30623.9
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	TCSECQELHWGDPGLQCR	TC(UniMod:4)SEC(UniMod:4)QELHWGDPGLQC(UniMod:4)R	3	TC(UniMod:4)SEC(UniMod:4)QELHWGDPGLQC(UniMod:4)R3	8274.59	11840	8537.11
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	TCSFQEGR	TC(UniMod:4)SFQEGR	2	TC(UniMod:4)SFQEGR2	15194.7	11759.2	18330.1
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	TCSHPCSAQGTVMHDPCICCSGEICPALLK	TC(UniMod:4)SHPC(UniMod:4)SAQGTVMHDPC(UniMod:4)IC(UniMod:4)C(UniMod:4)SGEIC(UniMod:4)PALLK	4	TC(UniMod:4)SHPC(UniMod:4)SAQGTVMHDPC(UniMod:4)IC(UniMod:4)C(UniMod:4)SGEIC(UniMod:4)PALLK4	3877.14	5851.26	3609.82
P29315	P29315	RINI_RAT	Rnh1	Ribonuclease inhibitor	1	TCSLTAASCPHFCSVLTK	TC(UniMod:4)SLTAASC(UniMod:4)PHFC(UniMod:4)SVLTK	3	TC(UniMod:4)SLTAASC(UniMod:4)PHFC(UniMod:4)SVLTK3	31996.6	26131	23242.2
D4A9N5	D4A9N5	D4A9N5_RAT	Trim25	Tripartite motif-containing 25	1	TCSPTILSQASADLENK	TC(UniMod:4)SPTILSQASADLENK	2	TC(UniMod:4)SPTILSQASADLENK2		1120.09	6448.31
Q5PPN7	Q5PPN7	MITOK_RAT	Ccdc51	Mitochondrial potassium channel	1	TCSQMAGVVR	TC(UniMod:4)SQMAGVVR	2	TC(UniMod:4)SQMAGVVR2	4358.52	4452.43	
P19999	P19999	MBL1_RAT	Mbl1	Mannose-binding protein A	1	TCSVIACGR	TC(UniMod:4)SVIAC(UniMod:4)GR	2	TC(UniMod:4)SVIAC(UniMod:4)GR2	513427	530640	520357
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	TCSVWSLLR	TC(UniMod:4)SVWSLLR	2	TC(UniMod:4)SVWSLLR2	32192.3	24309.6	26809.5
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	TCTIILR	TC(UniMod:4)TIILR	2	TC(UniMod:4)TIILR2	437749	434695	394127
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	TCTLDDLR	TC(UniMod:4)TLDDLR	2	TC(UniMod:4)TLDDLR2	26186.9	23941	18519.5
P62425	P62425;A0A8I6AUG1;M0R3M3;D3ZU22;D3ZJH5;D3ZPL5;A0A8I6B5R5;A0A8I5ZPC7;D4A6B9	RL7A_RAT	Rpl7a	Large ribosomal subunit protein eL8	0	TCTTVAFTQVNSEDK	TC(UniMod:4)TTVAFTQVNSEDK	2	TC(UniMod:4)TTVAFTQVNSEDK2	10581.1	9226.57	15005.3
P62425	P62425;A0A8I6AUG1;M0R3M3;D3ZU22;D3ZJH5;D3ZPL5;A0A8I6B5R5;A0A8I5ZPC7;D4A6B9	RL7A_RAT	Rpl7a	Large ribosomal subunit protein eL8	0	TCTTVAFTQVNSEDK	TC(UniMod:4)TTVAFTQVNSEDK	3	TC(UniMod:4)TTVAFTQVNSEDK3		4290.07	1612.7
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	TCVAAIPR	TC(UniMod:4)VAAIPR	2	TC(UniMod:4)VAAIPR2	54426.6	52806.3	48005.9
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	TCVADAK	TC(UniMod:4)VADAK	1	TC(UniMod:4)VADAK1			4095.4
P02770	P02770	ALBU_RAT	Alb	Albumin	1	TCVADENAENCDK	TC(UniMod:4)VADENAENC(UniMod:4)DK	2	TC(UniMod:4)VADENAENC(UniMod:4)DK2	78114.6	68336.1	1.24272e+07
P02770	P02770	ALBU_RAT	Alb	Albumin	1	TCVADENAENCDK	TC(UniMod:4)VADENAENC(UniMod:4)DK	3	TC(UniMod:4)VADENAENC(UniMod:4)DK3	7072.98	3926.93	4416.46
D3ZQ30	D3ZQ30	D3ZQ30_RAT	Telo2	Telomere length regulation protein TEL2 homolog	1	TCVAEFEQLR	TC(UniMod:4)VAEFEQLR	2	TC(UniMod:4)VAEFEQLR2	11609.3	14242.8	5716.48
P17425	P17425	HMCS1_RAT	Hmgcs1	Hydroxymethylglutaryl-CoA synthase, cytoplasmic	1	TCVAPDVFAENMK	TC(UniMod:4)VAPDVFAENMK	2	TC(UniMod:4)VAPDVFAENMK2	7574.79	14592.2	15718.5
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	TCVDINECQR	TC(UniMod:4)VDINEC(UniMod:4)QR	2	TC(UniMod:4)VDINEC(UniMod:4)QR2	1.89568e+06	1.23822e+06	1.13704e+06
A0A0G2JY81	A0A0G2JY81	A0A0G2JY81_RAT	Fbln1	Fibulin-1	1	TCVDINECQR	TC(UniMod:4)VDINEC(UniMod:4)QR	3	TC(UniMod:4)VDINEC(UniMod:4)QR3	4070.03		
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	TCVDINECVLDPGK	TC(UniMod:4)VDINEC(UniMod:4)VLDPGK	2	TC(UniMod:4)VDINEC(UniMod:4)VLDPGK2	32183.4	49333.2	30785.6
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	TCVDNLK	TC(UniMod:4)VDNLK	2	TC(UniMod:4)VDNLK2	32427.4	45475.4	31112.9
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	TCVDTYTNR	TC(UniMod:4)VDTYTNR	2	TC(UniMod:4)VDTYTNR2	26469.6	32267.3	29641.8
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	TCVDVNECDLNPNICLSGTCENTK	TC(UniMod:4)VDVNEC(UniMod:4)DLNPNIC(UniMod:4)LSGTC(UniMod:4)ENTK	3	TC(UniMod:4)VDVNEC(UniMod:4)DLNPNIC(UniMod:4)LSGTC(UniMod:4)ENTK3	7032.61	10357	5059.53
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	TCVFEKENDPSVMR	TC(UniMod:4)VFEKENDPSVMR	3	TC(UniMod:4)VFEKENDPSVMR3	7609.41	13937.8	15781.8
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	TCVGTSK	TC(UniMod:4)VGTSK	1	TC(UniMod:4)VGTSK1			10366.8
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	TCVPDMSDK	TC(UniMod:4)VPDMSDK	2	TC(UniMod:4)VPDMSDK2	43332.8	41355.3	27329.8
P58405	P58405;F1M6V8	STRN3_RAT	Strn3	Striatin-3	0	TCVQEITAHR	TC(UniMod:4)VQEITAHR	2	TC(UniMod:4)VQEITAHR2	7162.02	7419.93	10176.3
P58405	P58405;F1M6V8	STRN3_RAT	Strn3	Striatin-3	0	TCVQEITAHR	TC(UniMod:4)VQEITAHR	3	TC(UniMod:4)VQEITAHR3	114203	106885	109484
P58405	P58405;F1M6V8	STRN3_RAT	Strn3	Striatin-3	0	TCVQEITAHRK	TC(UniMod:4)VQEITAHRK	3	TC(UniMod:4)VQEITAHRK3	4802.21	7745.05	9004.19
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	TCVSLAVSR	TC(UniMod:4)VSLAVSR	2	TC(UniMod:4)VSLAVSR2	22968.7	23174.6	17502.7
A0A0G2JY22	D3ZZB0;A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	0	TCVVVAEERPR	TC(UniMod:4)VVVAEERPR	3	TC(UniMod:4)VVVAEERPR3	48236.8	48203.4	38559.1
P0CE43	P0CE43	GRB10_RAT	Grb10	Growth factor receptor-bound protein 10	1	TCWMTAFR	TC(UniMod:4)WMTAFR	2	TC(UniMod:4)WMTAFR2	32082.5	25728.9	17911.9
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	TCYIAPER	TC(UniMod:4)YIAPER	2	TC(UniMod:4)YIAPER2	46575.2	29357.5	45156.7
Q7TSU1	D4A631;Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	0	TCYNIYLASK	TC(UniMod:4)YNIYLASK	2	TC(UniMod:4)YNIYLASK2	3336.11	5646.31	3228.73
Q07266	Q07266	DREB_RAT	Dbn1	Drebrin	1	TDAAVEMK	TDAAVEMK	2	TDAAVEMK2	5233.33	5214.75	4899.71
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	TDAGFTLR	TDAGFTLR	2	TDAGFTLR2	1.2469e+06	1.25485e+06	1.34169e+06
P01026	P01026	CO3_RAT	C3	Complement C3	1	TDAGQEAK	TDAGQEAK	1	TDAGQEAK1	3815.36		
P01026	P01026	CO3_RAT	C3	Complement C3	1	TDAGQEAK	TDAGQEAK	2	TDAGQEAK2	32338.3		32676.5
A0A8I6A202	A0A8I6A202	A0A8I6A202_RAT	Pusl1	tRNA pseudouridine synthase	1	TDAGVHALSNAAHLDIQR	TDAGVHALSNAAHLDIQR	4	TDAGVHALSNAAHLDIQR4	6858.83	8739.01	
Q5BJT7	Q5BJT7	CCD93_RAT	Ccdc93	Coiled-coil domain-containing protein 93	1	TDAHEEDELQAAEEQR	TDAHEEDELQAAEEQR	3	TDAHEEDELQAAEEQR3	4576.13	3421.45	5233.17
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	TDAHFVDVIK	TDAHFVDVIK	3	TDAHFVDVIK3	21114.1	28815.2	13140.2
Q5U2X1	Q5U2X1	FBX9_RAT	Fbxo9	F-box only protein 9	1	TDAILLGHYR	TDAILLGHYR	3	TDAILLGHYR3	10439	11245.8	12805.5
P00406	P00406	COX2_RAT	Mtco2	Cytochrome c oxidase subunit 2	1	TDAIPGR	TDAIPGR	1	TDAIPGR1		9910.92	8805.11
P08650	P08650	CO5_RAT	C5	Complement C5	1	TDAPELPEENQASK	TDAPELPEENQASK	2	TDAPELPEENQASK2	922931	723935	646174
P08650	P08650	CO5_RAT	C5	Complement C5	1	TDAPELPEENQASK	TDAPELPEENQASK	3	TDAPELPEENQASK3	45903.6	12087.4	24540.6
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	TDAPLNIR	TDAPLNIR	2	TDAPLNIR2	43907.9	44002.1	41388.6
P35565	P35565	CALX_RAT	Canx	Calnexin	1	TDAPQPDVK	TDAPQPDVK	1	TDAPQPDVK1	8606.27	5388.97	8493.85
P35565	P35565	CALX_RAT	Canx	Calnexin	1	TDAPQPDVK	TDAPQPDVK	2	TDAPQPDVK2	1.36273e+06	1.23312e+06	1.36757e+06
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	TDASDVTPC	TDASDVTPC(UniMod:4)	1	TDASDVTPC(UniMod:4)1	1.78468e+06	1.52832e+06	1.72055e+06
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	TDASDVTPC	TDASDVTPC(UniMod:4)	2	TDASDVTPC(UniMod:4)2	413539	443841	490463
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	TDATMVVK	TDATMVVK	1	TDATMVVK1	7340.8	4162.36	5910.52
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	TDATMVVK	TDATMVVK	2	TDATMVVK2	818618	739567	805825
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	TDATTAIIK	TDATTAIIK	2	TDATTAIIK2	76242.3	91117.4	82749.6
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	TDAVDSVVR	TDAVDSVVR	2	TDAVDSVVR2	82833.7	63663.8	53922.1
D4A3E1	D4A3E1	D4A3E1_RAT	Hnrnpll	Heterogeneous nuclear ribonucleoprotein L-like	1	TDAVEALTALNHYQIR	TDAVEALTALNHYQIR	3	TDAVEALTALNHYQIR3	8623.72	6424.54	
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	TDAYQVLR	TDAYQVLR	2	TDAYQVLR2	62497.1	67358.7	70116.1
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	TDCDNLPTFEIAKPTEK	TDC(UniMod:4)DNLPTFEIAKPTEK	3	TDC(UniMod:4)DNLPTFEIAKPTEK3	257658	202615	220817
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	TDCENGSDELDCSPK	TDC(UniMod:4)ENGSDELDC(UniMod:4)SPK	2	TDC(UniMod:4)ENGSDELDC(UniMod:4)SPK2	6042.65	10680.3	1640.24
P23764	P23764	GPX3_RAT	Gpx3	Glutathione peroxidase 3	1	TDCHGGMSGTIYEYGALTIDGEEYIPFK	TDC(UniMod:4)HGGMSGTIYEYGALTIDGEEYIPFK	4	TDC(UniMod:4)HGGMSGTIYEYGALTIDGEEYIPFK4	12547.4	18079.4	9806.63
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	TDCNHIFLNFVPTVIMDPSK	TDC(UniMod:4)NHIFLNFVPTVIMDPSK	3	TDC(UniMod:4)NHIFLNFVPTVIMDPSK3	11539.7	18848.6	17689.3
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	TDCPGNALFNLLR	TDC(UniMod:4)PGNALFNLLR	2	TDC(UniMod:4)PGNALFNLLR2	37288	47904	57643
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	TDCPGNALFNLLR	TDC(UniMod:4)PGNALFNLLR	3	TDC(UniMod:4)PGNALFNLLR3	12708	7121.71	8270.51
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	TDCSAVTDIR	TDC(UniMod:4)SAVTDIR	2	TDC(UniMod:4)SAVTDIR2	285976	277641	288101
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	TDCSLAR	TDC(UniMod:4)SLAR	2	TDC(UniMod:4)SLAR2		54707.8	
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	TDCVDSCPHPIR	TDC(UniMod:4)VDSC(UniMod:4)PHPIR	3	TDC(UniMod:4)VDSC(UniMod:4)PHPIR3	36108.1	27872.9	32762.5
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	TDDEVVQR	TDDEVVQR	2	TDDEVVQR2	235324	206172	222949
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	TDDEVVQREEEAIQLDGLNASQIR	TDDEVVQREEEAIQLDGLNASQIR	3	TDDEVVQREEEAIQLDGLNASQIR3	678284	699532	632906
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	TDDEVVQREEEAIQLDGLNASQIR	TDDEVVQREEEAIQLDGLNASQIR	4	TDDEVVQREEEAIQLDGLNASQIR4	27722.7	31468.6	27194.7
Q64380	Q64380	SARDH_RAT	Sardh	Sarcosine dehydrogenase, mitochondrial	1	TDDFGVR	TDDFGVR	2	TDDFGVR2	5481.19	8439.78	4239.09
Q6PEC4	Q6PEC4	SKP1_RAT	Skp1	S-phase kinase-associated protein 1	1	TDDIPVWDQEFLK	TDDIPVWDQEFLK	2	TDDIPVWDQEFLK2	119895	104512	101599
Q10473	Q10473	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	1	TDDLCLDVSK	TDDLC(UniMod:4)LDVSK	2	TDDLC(UniMod:4)LDVSK2	118434	112968	107051
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	TDDLITR	TDDLITR	2	TDDLITR2	11666.2	9756.1	9177.43
Q99MH3	Q99MH3	HEPC_RAT	Hamp	Hepcidin	1	TDDSALLMLK	TDDSALLMLK	2	TDDSALLMLK2	2729.72	3422.3	2126.92
P13221	P13221	AATC_RAT	Got1	Aspartate aminotransferase, cytoplasmic	1	TDDSQPWVLPVVR	TDDSQPWVLPVVR	2	TDDSQPWVLPVVR2	25452.5	29193.2	34518.9
P13221	P13221	AATC_RAT	Got1	Aspartate aminotransferase, cytoplasmic	1	TDDSQPWVLPVVR	TDDSQPWVLPVVR	3	TDDSQPWVLPVVR3	5373.37	3551.9	5912.65
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	TDDYGRDLSSVQTLLTK	TDDYGRDLSSVQTLLTK	3	TDDYGRDLSSVQTLLTK3	13044.8	11956.8	23235.5
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	TDDYLDQPCCETINR	TDDYLDQPC(UniMod:4)C(UniMod:4)ETINR	2	TDDYLDQPC(UniMod:4)C(UniMod:4)ETINR2	39544.8	37470.6	32584.8
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	TDDYLDQPCCETINR	TDDYLDQPC(UniMod:4)C(UniMod:4)ETINR	3	TDDYLDQPC(UniMod:4)C(UniMod:4)ETINR3	6473.33	3900.35	9685.01
P50398	P50398	GDIA_RAT	Gdi1	Rab GDP dissociation inhibitor alpha	1	TDDYLDQPCLETINR	TDDYLDQPC(UniMod:4)LETINR	2	TDDYLDQPC(UniMod:4)LETINR2	68327.4	56449.8	63111.1
P50398	P50398	GDIA_RAT	Gdi1	Rab GDP dissociation inhibitor alpha	1	TDDYLDQPCLETINR	TDDYLDQPC(UniMod:4)LETINR	3	TDDYLDQPC(UniMod:4)LETINR3	3759.11	7335.01	
P05942	P05942	S10A4_RAT	S100a4	Protein S100-A4	1	TDEAAFQK	TDEAAFQK	1	TDEAAFQK1	11048	12945.3	13389.3
P05942	P05942	S10A4_RAT	S100a4	Protein S100-A4	1	TDEAAFQK	TDEAAFQK	2	TDEAAFQK2	701442	753397	652483
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	TDEDSYIVFTYRPCGCCSYVGR	TDEDSYIVFTYRPC(UniMod:4)GC(UniMod:4)C(UniMod:4)SYVGR	3	TDEDSYIVFTYRPC(UniMod:4)GC(UniMod:4)C(UniMod:4)SYVGR3	9879.2	9316.33	8042.06
Q64604	A0A8I6A1V1;Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	0	TDEDVPSGPPR	TDEDVPSGPPR	2	TDEDVPSGPPR2	35764.5	29882.6	20543.4
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	TDEEIPMEPGDIIGVAGNHWDGYSK	TDEEIPMEPGDIIGVAGNHWDGYSK	3	TDEEIPMEPGDIIGVAGNHWDGYSK3	90904.5	87120.4	102260
D3ZPA7	D3ZPA7	D3ZPA7_RAT	Scara3	Scavenger receptor class A, member 3	1	TDEETLTLQK	TDEETLTLQK	2	TDEETLTLQK2	670.267	4522.54	3244.94
Q9Z2L0	A0A8I5ZUF9;Q9Z2L0	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	0	TDEFQLHTNVNDGTEFGGSIYQK	TDEFQLHTNVNDGTEFGGSIYQK	3	TDEFQLHTNVNDGTEFGGSIYQK3	222168	213295	190088
Q64548	Q64548	RTN1_RAT	Rtn1	Reticulon-1	1	TDEGHPFK	TDEGHPFK	1	TDEGHPFK1			4747.32
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	TDEGPDTPSYNR	TDEGPDTPSYNR	2	TDEGPDTPSYNR2	8014.61	8367.36	11043.7
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	TDEGTYR	TDEGTYR	2	TDEGTYR2	71090.4		251890
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	TDEGTYRCEGR	TDEGTYRC(UniMod:4)EGR	3	TDEGTYRC(UniMod:4)EGR3			11644.5
P12368	P12368	KAP2_RAT	Prkar2a	cAMP-dependent protein kinase type II-alpha regulatory subunit	1	TDEHVIDQGDDGDNFYVIER	TDEHVIDQGDDGDNFYVIER	3	TDEHVIDQGDDGDNFYVIER3	11971.4	4726.83	7148.51
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	TDEIGEICVSSR	TDEIGEIC(UniMod:4)VSSR	2	TDEIGEIC(UniMod:4)VSSR2	17586.3	23696.3	12475.3
A0A0G2K548	A0A0G2K548	A0A0G2K548_RAT	Akap9	A-kinase anchoring protein 9	1	TDEIHFLSDTLAR	TDEIHFLSDTLAR	3	TDEIHFLSDTLAR3	2202		
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	TDELIQQK	TDELIQQK	2	TDELIQQK2	51590.6	59395.6	46721.3
A0A0U1RRV5	A0A0U1RRV5	A0A0U1RRV5_RAT	Cluh	Clustered mitochondria protein homolog	1	TDELPAAAPADSAR	TDELPAAAPADSAR	2	TDELPAAAPADSAR2	4534.37	3180.58	1255.75
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TDELPQLVTLPHPNLHGPEILDVPSTVQK	TDELPQLVTLPHPNLHGPEILDVPSTVQK	4	TDELPQLVTLPHPNLHGPEILDVPSTVQK4	1.70351e+07	1.93947e+07	1.88543e+07
D3ZRC4	D3ZRC4	PLPL8_RAT	Pnpla8	Calcium-independent phospholipase A2-gamma	1	TDEPICK	TDEPIC(UniMod:4)K	2	TDEPIC(UniMod:4)K2	11772.1	15027.1	13933.8
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	TDEPVSGAAIAPAALSPQEK	TDEPVSGAAIAPAALSPQEK	2	TDEPVSGAAIAPAALSPQEK2	7706.48	5751.66	1498.79
Q6P791	Q6P791	LTOR1_RAT	Lamtor1	Ragulator complex protein LAMTOR1	1	TDEQALLSSILAK	TDEQALLSSILAK	2	TDEQALLSSILAK2	92951.5	62742	87570.7
Q6P791	Q6P791	LTOR1_RAT	Lamtor1	Ragulator complex protein LAMTOR1	1	TDEQALLSSILAK	TDEQALLSSILAK	3	TDEQALLSSILAK3	10936.2	9612	10996.9
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	TDEQGLIVEDLVEEVGREEDPHEGK	TDEQGLIVEDLVEEVGREEDPHEGK	3	TDEQGLIVEDLVEEVGREEDPHEGK3	14242	7312.27	
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	TDEQGLIVEDLVEEVGREEDPHEGK	TDEQGLIVEDLVEEVGREEDPHEGK	4	TDEQGLIVEDLVEEVGREEDPHEGK4	11134.7	14270.9	7260.69
O88797	O88797	DAB2_RAT	Dab2	Disabled homolog 2	1	TDEYLLAR	TDEYLLAR	2	TDEYLLAR2	4913.29		
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	TDFAEGK	TDFAEGK	2	TDFAEGK2	12038.7		
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	TDFAEQLGAMNK	TDFAEQLGAMNK	2	TDFAEQLGAMNK2	1011.86	2533.25	2187.64
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	TDFDKNK	TDFDKNK	2	TDFDKNK2			22400.3
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	TDFEPVK	TDFEPVK	1	TDFEPVK1	1822.02		2006.34
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	TDFEPVK	TDFEPVK	2	TDFEPVK2	53360.6	71763.1	70178.9
P80386	P80386	AAKB1_RAT	Prkab1	5'-AMP-activated protein kinase subunit beta-1	1	TDFEVFDALMVDSQK	TDFEVFDALMVDSQK	2	TDFEVFDALMVDSQK2	20469.1	16713.7	23844.7
Q63525	Q63525	NUDC_RAT	Nudc	Nuclear migration protein nudC	1	TDFFIGGEEGMAEK	TDFFIGGEEGMAEK	2	TDFFIGGEEGMAEK2	17730.2	17270.9	17557.5
Q5XIT9	Q5XIT9	MCCB_RAT	Mccc2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	1	TDFGIFR	TDFGIFR	2	TDFGIFR2	35878	35253.5	29410.7
O88658	O88658;F1M4A4	KIF1B_RAT	Kif1b	Kinesin-like protein KIF1B	0	TDFIPYR	TDFIPYR	2	TDFIPYR2	7211.82	21093.8	19552.3
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	TDFKEESEPGYK	TDFKEESEPGYK	2	TDFKEESEPGYK2	4186.73	4566.89	4682.14
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	TDFKEESEPGYK	TDFKEESEPGYK	3	TDFKEESEPGYK3	32785.5	21251.2	12248.4
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	TDFKEESEPGYKR	TDFKEESEPGYKR	4	TDFKEESEPGYKR4	11239.6	15230	12484.7
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	TDFKPEDENNVLIQYTNACVK	TDFKPEDENNVLIQYTNAC(UniMod:4)VK	3	TDFKPEDENNVLIQYTNAC(UniMod:4)VK3	3902.48	1977.86	5429.47
Q71RP1	Q71RP1	HPSE_RAT	Hpse	Heparanase	1	TDFLIFDPNK	TDFLIFDPNK	2	TDFLIFDPNK2	100251	95586.3	98551.8
Q71RP1	Q71RP1	HPSE_RAT	Hpse	Heparanase	1	TDFLIFDPNKEPTSEER	TDFLIFDPNKEPTSEER	3	TDFLIFDPNKEPTSEER3	15340.3	16453.5	19366.8
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	TDFNILYGMMK	TDFNILYGMMK	2	TDFNILYGMMK2	34736.2	20898.8	25512.5
B0BNJ4	B0BNJ4	B0BNJ4_RAT	Ethe1	ETHE1, persulfide dioxygenase	1	TDFQQGCAK	TDFQQGC(UniMod:4)AK	2	TDFQQGC(UniMod:4)AK2	14344.5	16785.5	27391
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	TDFVGTVAGWGLTQK	TDFVGTVAGWGLTQK	2	TDFVGTVAGWGLTQK2	661910	726823	705588
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	TDFVGTVAGWGLTQK	TDFVGTVAGWGLTQK	3	TDFVGTVAGWGLTQK3	248093	277868	318940
F1M7L9	F1M7L9	PKP2_RAT	Pkp2	Plakophilin-2	1	TDFVNSR	TDFVNSR	2	TDFVNSR2	16533.2	13395.5	10687.2
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	TDGCHAYLSK	TDGC(UniMod:4)HAYLSK	2	TDGC(UniMod:4)HAYLSK2	193798	147598	157249
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	TDGCHAYLSK	TDGC(UniMod:4)HAYLSK	3	TDGC(UniMod:4)HAYLSK3	14427.8	2.01275e+06	2.42171e+06
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	TDGCQHFCHPGQSSYMCSCAK	TDGC(UniMod:4)QHFC(UniMod:4)HPGQSSYMC(UniMod:4)SC(UniMod:4)AK	3	TDGC(UniMod:4)QHFC(UniMod:4)HPGQSSYMC(UniMod:4)SC(UniMod:4)AK3	180656	169664	229881
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	TDGCQHFCHPGQSSYMCSCAK	TDGC(UniMod:4)QHFC(UniMod:4)HPGQSSYMC(UniMod:4)SC(UniMod:4)AK	4	TDGC(UniMod:4)QHFC(UniMod:4)HPGQSSYMC(UniMod:4)SC(UniMod:4)AK4	1.02735e+06	1.01606e+06	1.16497e+06
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	TDGDIEDDRLAAMFR	TDGDIEDDRLAAMFR	3	TDGDIEDDRLAAMFR3	24122.7	30311.8	24626.4
Q99P74	Q99P74	RB27B_RAT	Rab27b	Ras-related protein Rab-27B	1	TDGDYDYLIK	TDGDYDYLIK	2	TDGDYDYLIK2	75246	92191.1	72969.5
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	TDGEPTEGPWVK	TDGEPTEGPWVK	2	TDGEPTEGPWVK2	32209	34246.4	40499.1
Q64537	Q64537	CPNS1_RAT	Capns1	Calpain small subunit 1	1	TDGFGIDTCR	TDGFGIDTC(UniMod:4)R	2	TDGFGIDTC(UniMod:4)R2	2.35402e+06	2.88309e+06	2.76708e+06
Q9Z2Z8	Q9Z2Z8	DHCR7_RAT	Dhcr7	7-dehydrocholesterol reductase	1	TDGHCLIWGK	TDGHC(UniMod:4)LIWGK	3	TDGHC(UniMod:4)LIWGK3	13196.4	20264.5	19361.1
A0A8I6ARU6	A0A8I6ARU6	A0A8I6ARU6_RAT	Galk1	Galactokinase 1	1	TDGLVSLLTTSK	TDGLVSLLTTSK	2	TDGLVSLLTTSK2	28714.1	22530.1	14714.5
Q9WUK5	Q9WUK5	INHBC_RAT	Inhbc	Inhibin beta C chain	1	TDGPCPACWGATFDLESHR	TDGPC(UniMod:4)PAC(UniMod:4)WGATFDLESHR	3	TDGPC(UniMod:4)PAC(UniMod:4)WGATFDLESHR3	12467	21744.7	27415.7
Q6AYD4	Q6AYD4	ESAM_RAT	Esam	Endothelial cell-selective adhesion molecule	1	TDGPPPQAVSLTPGGVSSSTLNR	TDGPPPQAVSLTPGGVSSSTLNR	3	TDGPPPQAVSLTPGGVSSSTLNR3	38754.6	22209.9	55576.6
D3ZUX7	D3ZUX7	D3ZUX7_RAT	Acsf3	Acyl-CoA synthetase family member 3	1	TDGSAPVFIR	TDGSAPVFIR	2	TDGSAPVFIR2	21356.7	20278.8	18288.3
Q63484	Q63484	AKT3_RAT	Akt3	RAC-gamma serine/threonine-protein kinase	1	TDGSFIGYK	TDGSFIGYK	2	TDGSFIGYK2			7935.47
D3ZQL1	D3ZQL1	D3ZQL1_RAT	Emc7	ER membrane protein complex subunit 7	1	TDGSFVVHDIPSGSYVVEVISPAYK	TDGSFVVHDIPSGSYVVEVISPAYK	3	TDGSFVVHDIPSGSYVVEVISPAYK3	43307.5	41902.7	45820.7
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	TDGSSTLR	TDGSSTLR	2	TDGSSTLR2	40514.4		44525.5
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	TDGSSTLREDQQEPR	TDGSSTLREDQQEPR	3	TDGSSTLREDQQEPR3	82808	55977.3	85563.5
Q5HZX7	Q5HZX7	LDAH_RAT	Ldah	Lipid droplet-associated hydrolase	1	TDGWCPVNYYEDMK	TDGWC(UniMod:4)PVNYYEDMK	2	TDGWC(UniMod:4)PVNYYEDMK2	4455.55	2684.31	5350
A0A8I6GH80	A0A8I6GH80	A0A8I6GH80_RAT	Vps4b	vesicle-fusing ATPase	1	TDGYSGADISIIVR	TDGYSGADISIIVR	2	TDGYSGADISIIVR2	3054.65		
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	TDHDIALVR	TDHDIALVR	2	TDHDIALVR2	142133	125949	136551
P50745	P50745	SH2B3_RAT	Sh2b3	SH2B adapter protein 3	1	TDHFLSCYPWFHGPISR	TDHFLSC(UniMod:4)YPWFHGPISR	4	TDHFLSC(UniMod:4)YPWFHGPISR4	5204.13	6670.85	4493.42
G3V9L1	G3V9L1	G3V9L1_RAT	Tex2	Testis expressed 2	1	TDHLKPSEDASK	TDHLKPSEDASK	3	TDHLKPSEDASK3			11551.4
Q5XI73	Q5XI73	GDIR1_RAT	Arhgdia	Rho GDP-dissociation inhibitor 1	1	TDHLSWEWNLTIK	TDHLSWEWNLTIK	2	TDHLSWEWNLTIK2	11525.5	5881.64	
Q5XI73	Q5XI73	GDIR1_RAT	Arhgdia	Rho GDP-dissociation inhibitor 1	1	TDHLSWEWNLTIK	TDHLSWEWNLTIK	3	TDHLSWEWNLTIK3	11119.6	9149.35	5289.86
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	TDHSTTIDHNVAMMLAQLINDGSPMVR	TDHSTTIDHNVAMMLAQLINDGSPMVR	4	TDHSTTIDHNVAMMLAQLINDGSPMVR4	3684.45	3482.78	
M0R7E7	M0R7E7	M0R7E7_RAT	Map2k3	Mitogen activated protein kinase kinase 3	1	TDIAAFVK	TDIAAFVK	2	TDIAAFVK2	45128.9	42383.4	37518.8
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	TDIAGETESVSDCADDVSEAPATSEQK	TDIAGETESVSDC(UniMod:4)ADDVSEAPATSEQK	3	TDIAGETESVSDC(UniMod:4)ADDVSEAPATSEQK3	3657.26	5352.14	2931.7
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	TDIEDLFK	TDIEDLFK	2	TDIEDLFK2	11426.7	8378.54	10308.5
D4AE80	D4AE80	D4AE80_RAT	Dcp1a	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	TDIEGTLFVYR	TDIEGTLFVYR	2	TDIEGTLFVYR2	13390	12834.5	10595.9
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	TDILGVQK	TDILGVQK	2	TDILGVQK2	22403.7	11284.7	18887.6
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	TDILGVQKPGAWGALK	TDILGVQKPGAWGALK	2	TDILGVQKPGAWGALK2	3559.3	1586.11	4277.92
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	TDILGVQKPGAWGALK	TDILGVQKPGAWGALK	3	TDILGVQKPGAWGALK3	59382.3	66031.2	55602.3
P70583	D4A6V3;A0A8I6AMI3;P70583	DUT_RAT	Dut	Deoxyuridine 5'-triphosphate nucleotidohydrolase	0	TDIQIAVPSGCYGR	TDIQIAVPSGC(UniMod:4)YGR	2	TDIQIAVPSGC(UniMod:4)YGR2	12045.2	5939.38	14177.5
P56522	P56522	ADRO_RAT	Fdxr	NADPH:adrenodoxin oxidoreductase, mitochondrial	1	TDITEVALGVLR	TDITEVALGVLR	2	TDITEVALGVLR2	5862.96	3931.58	1710.59
P62703	P62703	RS4X_RAT	Rps4x	Small ribosomal subunit protein eS4	1	TDITYPAGFMDVISIDK	TDITYPAGFMDVISIDK	2	TDITYPAGFMDVISIDK2	34881.6	33415.5	40651
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	TDKDMDGYVSGLEVR	TDKDMDGYVSGLEVR	2	TDKDMDGYVSGLEVR2	3515.42	7312.65	6234.18
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	TDKDMDGYVSGLEVR	TDKDMDGYVSGLEVR	3	TDKDMDGYVSGLEVR3	113723	88531.8	97065.9
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	TDKELIATVR	TDKELIATVR	2	TDKELIATVR2	7910.06	8039.3	15011.5
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	TDKELIATVR	TDKELIATVR	3	TDKELIATVR3	53181.6	56484.6	58134.6
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	TDKQPVQRPSHCTIYVAK	TDKQPVQRPSHC(UniMod:4)TIYVAK	4	TDKQPVQRPSHC(UniMod:4)TIYVAK4	4925.54	4934.08	8415.92
Q9WVB1	A0A0G2JT78;Q9WVB1	RAB6A_RAT	Rab6a	Ras-related protein Rab-6A	0	TDLADKR	TDLADKR	2	TDLADKR2			30146.7
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	TDLDLDGYVSGQEVK	TDLDLDGYVSGQEVK	2	TDLDLDGYVSGQEVK2	5316.53	2764.41	2486.72
Q9JHU5	Q9JHU5	ARFP1_RAT	Arfip1	Arfaptin-1	1	TDLEELNLGPR	TDLEELNLGPR	2	TDLEELNLGPR2	47062.3	46511	47669
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	TDLEEVQSALDSK	TDLEEVQSALDSK	2	TDLEEVQSALDSK2	7088.15	8539.69	4916.61
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	TDLEMYVAVLNTQK	TDLEMYVAVLNTQK	2	TDLEMYVAVLNTQK2	5093.76	9296.62	560.486
P14630	P14630	APOM_RAT	Apom	Apolipoprotein M	1	TDLFSISCPGGIMLK	TDLFSISC(UniMod:4)PGGIMLK	2	TDLFSISC(UniMod:4)PGGIMLK2	2.75843e+06	2.4203e+06	2.77037e+06
P14630	P14630	APOM_RAT	Apom	Apolipoprotein M	1	TDLFSISCPGGIMLK	TDLFSISC(UniMod:4)PGGIMLK	3	TDLFSISC(UniMod:4)PGGIMLK3	97275.6	143891	144390
P14630	P14630	APOM_RAT	Apom	Apolipoprotein M	1	TDLFSISCPGGIMLKETGQGYQR	TDLFSISC(UniMod:4)PGGIMLKETGQGYQR	3	TDLFSISC(UniMod:4)PGGIMLKETGQGYQR3	8764.21	9539.87	4877.57
Q4G017	Q4G017	NISCH_RAT	Nisch	Nischarin	1	TDLGHILDFTCR	TDLGHILDFTC(UniMod:4)R	3	TDLGHILDFTC(UniMod:4)R3	8262.53	5261.35	4117.73
G3V8R8	G3V8R8	G3V8R8_RAT	Kcnk6	Potassium channel subfamily K member	1	TDLHQHLSAASHANYASIPR	TDLHQHLSAASHANYASIPR	3	TDLHQHLSAASHANYASIPR3		3250.46	3261.26
G3V8R8	G3V8R8	G3V8R8_RAT	Kcnk6	Potassium channel subfamily K member	1	TDLHQHLSAASHANYASIPR	TDLHQHLSAASHANYASIPR	4	TDLHQHLSAASHANYASIPR4	19462	30060.7	23258.8
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	TDLIELLAR	TDLIELLAR	2	TDLIELLAR2	3839.83	5527.85	4745.35
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	TDLLEEK	TDLLEEK	2	TDLLEEK2	51672.4	57659.3	52750.2
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	TDLLLEPYNK	TDLLLEPYNK	2	TDLLLEPYNK2	1.5209e+07	1.75859e+07	1.6521e+07
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	TDLLLEPYNK	TDLLLEPYNK	3	TDLLLEPYNK3	11047.7	10952.1	9529.45
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	TDLLLEPYNKYR	TDLLLEPYNKYR	2	TDLLLEPYNKYR2	30423.4	37361.2	23951.2
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	TDLLLEPYNKYR	TDLLLEPYNKYR	3	TDLLLEPYNKYR3	120651	168951	140843
F7FBG3	F7FBG3	F7FBG3_RAT	Commd7	COMM domain containing 7	1	TDLLTLGLSEEK	TDLLTLGLSEEK	2	TDLLTLGLSEEK2	3131.77	5928.17	5300.77
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	TDLNFGDWVCIWHCK	TDLNFGDWVC(UniMod:4)IWHC(UniMod:4)K	3	TDLNFGDWVC(UniMod:4)IWHC(UniMod:4)K3			7565.23
P07335	P07335	KCRB_RAT	Ckb	Creatine kinase B-type	1	TDLNPDNLQGGDDLDPNYVLSSR	TDLNPDNLQGGDDLDPNYVLSSR	3	TDLNPDNLQGGDDLDPNYVLSSR3	129939	108480	122452
Q6MG51	Q6MG51	CF047_RAT	G4	Uncharacterized protein C6orf47 homolog	1	TDLPAPEPR	TDLPAPEPR	2	TDLPAPEPR2	34443.5	39949.8	43572.7
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	TDLQTITNDPR	TDLQTITNDPR	2	TDLQTITNDPR2	12773	10592.2	7141.36
P12007	P12007	IVD_RAT	Ivd	Isovaleryl-CoA dehydrogenase, mitochondrial	1	TDLTAVPASR	TDLTAVPASR	2	TDLTAVPASR2	14062.2	20150	16151.1
Q68FY0	Q68FY0	QCR1_RAT	Uqcrc1	Cytochrome b-c1 complex subunit 1, mitochondrial	1	TDLTDYLSR	TDLTDYLSR	2	TDLTDYLSR2	147589	152326	149354
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	TDLVPAFQNLMK	TDLVPAFQNLMK	2	TDLVPAFQNLMK2	1.0048e+06	1.15647e+06	909143
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	TDLVPAFQNLMK	TDLVPAFQNLMK	3	TDLVPAFQNLMK3		1999.05	
A0A0G2K7U7	A0A0G2K7U7	A0A0G2K7U7_RAT	Ankrd27	Ankyrin repeat domain 27	1	TDLVPLLLK	TDLVPLLLK	2	TDLVPLLLK2	6183.59	6536.53	6336.65
Q07977	Q07977	SIA8B_RAT	St8sia2	Alpha-2,8-sialyltransferase 8B	1	TDLVTMNPSVIQR	TDLVTMNPSVIQR	2	TDLVTMNPSVIQR2	24875.6	27982.7	28039.9
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	TDMDNQIVVSDYAQMDR	TDMDNQIVVSDYAQMDR	3	TDMDNQIVVSDYAQMDR3	9038.52	7903.02	2669.43
A0A0G2JVP5	A0A0G2JVP5;A0A8I5ZUB7	A0A0G2JVP5_RAT	Paip1	Poly(A) binding protein interacting protein 1	0	TDMEEIIQR	TDMEEIIQR	2	TDMEEIIQR2	33286	39114.4	23552
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	TDMEHLSPEHEVILSSMIK	TDMEHLSPEHEVILSSMIK	3	TDMEHLSPEHEVILSSMIK3	7495.78	8498.36	5842.37
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	TDMEHLSPEHEVILSSMIK	TDMEHLSPEHEVILSSMIK	4	TDMEHLSPEHEVILSSMIK4	7426.16	11657.2	13903.4
Q5I0D7	Q5I0D7	PEPD_RAT	Pepd	Xaa-Pro dipeptidase	1	TDMELEVLR	TDMELEVLR	2	TDMELEVLR2	12516.1	16714.2	7760.16
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	TDMFAIHPTSGVVVLTGR	TDMFAIHPTSGVVVLTGR	2	TDMFAIHPTSGVVVLTGR2		4094.23	
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	TDMFAIHPTSGVVVLTGR	TDMFAIHPTSGVVVLTGR	3	TDMFAIHPTSGVVVLTGR3	13096.4	15772.1	12817.3
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	TDMFMITR	TDMFMITR	2	TDMFMITR2	25484.5	38686.2	30304.5
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	TDMNPFLAPR	TDMNPFLAPR	2	TDMNPFLAPR2	6708.33	7666.97	8379.36
A0A0G2JTM9	A0A0G2JTM9	A0A0G2JTM9_RAT	Dnajb14	DnaJ heat shock protein family (Hsp40) member B14	1	TDMQYAAK	TDMQYAAK	2	TDMQYAAK2	14128.6	11289.5	5281.15
A0A8I6AM23	A0A8I6AM23	A0A8I6AM23_RAT	Jak1	Tyrosine-protein kinase	1	TDNISFVLK	TDNISFVLK	2	TDNISFVLK2		5885.58	7319.64
Q9Z118	Q9Z118	PTBP3_RAT	Ptbp3	Polypyrimidine tract-binding protein 3	1	TDNLPNQAR	TDNLPNQAR	2	TDNLPNQAR2	87369.1	80798.2	75873.2
Q4FZV0	Q4FZV0	MANBA_RAT	Manba	Beta-mannosidase	1	TDNMFTR	TDNMFTR	2	TDNMFTR2	44741.2	33747	31821.3
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	TDNSEIFWNPTPDIK	TDNSEIFWNPTPDIK	2	TDNSEIFWNPTPDIK2	12520	13184.1	15717.2
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	TDPAALTDDEINR	TDPAALTDDEINR	2	TDPAALTDDEINR2	80892.9	95080.6	87195.2
Q7TP54	P02793;A0A8I6GIG4;A0A8I5ZY31;M0R5T8;Q7TP54;F1M5T1	RIPR2_RAT	Ripor2	Rho family-interacting cell polarization regulator 2	0	TDPHLCDFLESHFLDK	TDPHLC(UniMod:4)DFLESHFLDK	4	TDPHLC(UniMod:4)DFLESHFLDK4	7633.05	3901.47	5804.81
Q7TP54	P02793;A0A8I6GIG4;A0A8I5ZY31;M0R5T8;Q7TP54;F1M5T1	RIPR2_RAT	Ripor2	Rho family-interacting cell polarization regulator 2	0	TDPHLCDFLESHFLDKEVK	TDPHLC(UniMod:4)DFLESHFLDKEVK	4	TDPHLC(UniMod:4)DFLESHFLDKEVK4	7855.94	7183.66	8123.59
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	TDPLCLEGCVSSSLPKPPEK	TDPLC(UniMod:4)LEGC(UniMod:4)VSSSLPKPPEK	3	TDPLC(UniMod:4)LEGC(UniMod:4)VSSSLPKPPEK3	13212	13435.7	14721.8
Q4G002	Q4G002	Q4G002_RAT	RT1-T24-4	Histocompatibility 2, T region locus 24	1	TDPPQTTVTHHPRPEGDVTLR	TDPPQTTVTHHPRPEGDVTLR	4	TDPPQTTVTHHPRPEGDVTLR4	19334.7	15293.4	16983.4
D3ZJR7	D3ZJR7	D3ZJR7_RAT	Dsc2	Desmocollin 2	1	TDPQTNEGILCVIMPLDYEER	TDPQTNEGILC(UniMod:4)VIMPLDYEER	3	TDPQTNEGILC(UniMod:4)VIMPLDYEER3	54206.8	45978.3	50418.9
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	TDPRPDAATIK	TDPRPDAATIK	2	TDPRPDAATIK2	81683.1	70259.1	
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	TDPRPDAATIK	TDPRPDAATIK	3	TDPRPDAATIK3	308646	279215	311801
Q06647	Q06647	ATPO_RAT	Atp5po	ATP synthase subunit O, mitochondrial	1	TDPSIMGGMIVR	TDPSIMGGMIVR	2	TDPSIMGGMIVR2	814138	796173	898281
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	TDPTALTEEEVR	TDPTALTEEEVR	2	TDPTALTEEEVR2	4389.43	5143.71	6210.74
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	TDPTALTEEEVRK	TDPTALTEEEVRK	3	TDPTALTEEEVRK3	44382.9	41903.8	35145.1
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	TDPVDIYK	TDPVDIYK	2	TDPVDIYK2	126638	123036	111804
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	TDQDSVIGVSPAVMIR	TDQDSVIGVSPAVMIR	2	TDQDSVIGVSPAVMIR2	13086.7	6728.76	10165.8
Q8R492	Q8R492	Q8R492_RAT	Fap	Fibroblast activation protein, alpha	1	TDQEIQVLEENKELENALR	TDQEIQVLEENKELENALR	3	TDQEIQVLEENKELENALR3	7407.75	7759.92	12544.8
Q4QQU7	Q4QQU7	GRTP1_RAT	Grtp1	Growth hormone-regulated TBC protein 1	1	TDQEVLAELVR	TDQEVLAELVR	2	TDQEVLAELVR2	1716.49	3532.78	
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	TDQFPLFLIIMGK	TDQFPLFLIIMGK	2	TDQFPLFLIIMGK2		33590.7	40492.6
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	TDQHGKPHCVCQDPETCPPAK	TDQHGKPHC(UniMod:4)VC(UniMod:4)QDPETC(UniMod:4)PPAK	3	TDQHGKPHC(UniMod:4)VC(UniMod:4)QDPETC(UniMod:4)PPAK3	49600.5		71873.3
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	TDQHGKPHCVCQDPETCPPAK	TDQHGKPHC(UniMod:4)VC(UniMod:4)QDPETC(UniMod:4)PPAK	4	TDQHGKPHC(UniMod:4)VC(UniMod:4)QDPETC(UniMod:4)PPAK4	318596	351131	289439
D3ZAI6	D3ZAI6	D3ZAI6_RAT	Nt5dc3	5'-nucleotidase domain containing 3	1	TDQNPTYFLR	TDQNPTYFLR	2	TDQNPTYFLR2	16374.6	13348.8	20573.7
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	TDQNYEK	TDQNYEK	2	TDQNYEK2			15649.1
Q63663	Q63663	GBP2_RAT	Gbp2	Guanylate-binding protein 2	1	TDQSLTEAAK	TDQSLTEAAK	2	TDQSLTEAAK2	30107.6	22520.8	18692.1
D3Z8W5	D3Z8W5	D3Z8W5_RAT	Ube2l3	Ube2l3 protein	1	TDQVIQSLIALVNDPQPEHPLR	TDQVIQSLIALVNDPQPEHPLR	3	TDQVIQSLIALVNDPQPEHPLR3	22909.9	24623.9	24366.5
D3Z8W5	D3Z8W5	D3Z8W5_RAT	Ube2l3	Ube2l3 protein	1	TDQVIQSLIALVNDPQPEHPLR	TDQVIQSLIALVNDPQPEHPLR	4	TDQVIQSLIALVNDPQPEHPLR4	1942.62	2406.08	1846.78
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	TDREYQEYNPYEVLNLDPGATVAEIKK	TDREYQEYNPYEVLNLDPGATVAEIKK	4	TDREYQEYNPYEVLNLDPGATVAEIKK4	5554.39	4848.19	
A0A0G2JVL6	A0A0G2JVL6	A0A0G2JVL6_RAT	Ndufa8	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8	1	TDRPLPENPYHSR	TDRPLPENPYHSR	3	TDRPLPENPYHSR3	21468.2	26974.9	24962
A0A0G2JVL6	A0A0G2JVL6	A0A0G2JVL6_RAT	Ndufa8	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8	1	TDRPLPENPYHSR	TDRPLPENPYHSR	4	TDRPLPENPYHSR4	38812.1	26348.4	30026.4
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	TDRTEQWYGTQYK	TDRTEQWYGTQYK	3	TDRTEQWYGTQYK3	11797.6	14947.6	7721.09
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	TDRYAFLLDK	TDRYAFLLDK	3	TDRYAFLLDK3	2421.3	3167.49	6066.97
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	TDSACSLR	TDSAC(UniMod:4)SLR	2	TDSAC(UniMod:4)SLR2		9923.94	9101.05
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	TDSASADPDTLK	TDSASADPDTLK	2	TDSASADPDTLK2	3063.4	2025.58	2653.89
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	TDSDQQISILVVPPLEPGTASVR	TDSDQQISILVVPPLEPGTASVR	3	TDSDQQISILVVPPLEPGTASVR3	16964.8	13215.4	11324
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	TDSDSDLQLYK	TDSDSDLQLYK	2	TDSDSDLQLYK2	89651.5	103274	99727.7
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	TDSFCPLQCPAHSHYSVCTR	TDSFC(UniMod:4)PLQC(UniMod:4)PAHSHYSVC(UniMod:4)TR	3	TDSFC(UniMod:4)PLQC(UniMod:4)PAHSHYSVC(UniMod:4)TR3	507065	429763	428713
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	TDSFCPLQCPAHSHYSVCTR	TDSFC(UniMod:4)PLQC(UniMod:4)PAHSHYSVC(UniMod:4)TR	4	TDSFC(UniMod:4)PLQC(UniMod:4)PAHSHYSVC(UniMod:4)TR4	451067	523679	583492
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	TDSFFLEVQK	TDSFFLEVQK	2	TDSFFLEVQK2	32711.2	34106.9	31700.3
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	TDSIEECQK	TDSIEEC(UniMod:4)QK	2	TDSIEEC(UniMod:4)QK2		389274	
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	TDSINILADVLPEEMPTTVLQSMK	TDSINILADVLPEEMPTTVLQSMK	3	TDSINILADVLPEEMPTTVLQSMK3	3187.75	2839.99	4382.38
D3ZE59	D3ZE59	D3ZE59_RAT	Tmem115	Transmembrane protein 115	1	TDSPLPSEQASTPPGK	TDSPLPSEQASTPPGK	2	TDSPLPSEQASTPPGK2	28754.4	24864.8	35140.1
A0A8I6AKL8	A0A8I6AKL8	A0A8I6AKL8_RAT	Xpo5	Exportin 5	1	TDSPSCEYSR	TDSPSC(UniMod:4)EYSR	2	TDSPSC(UniMod:4)EYSR2	3678.81		
D3ZC01	D3ZC01	D3ZC01_RAT	Rbbp5	RB binding protein 5, histone lysine methyltransferase complex subunit	1	TDSQDLVASFR	TDSQDLVASFR	2	TDSQDLVASFR2	4113.87	2686.59	
Q8CGU4	Q8CGU4	AGAP2_RAT	Agap2	Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2	1	TDSQSEAVAIQAIR	TDSQSEAVAIQAIR	2	TDSQSEAVAIQAIR2	2306.91		
P09456	P09456	KAP0_RAT	Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit	1	TDSREDEISPPPPNPVVK	TDSREDEISPPPPNPVVK	3	TDSREDEISPPPPNPVVK3	182449	168301	180383
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	TDSTRPAVGLR	TDSTRPAVGLR	3	TDSTRPAVGLR3	131207	183711	114773
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	TDSTTVTVR	TDSTTVTVR	2	TDSTTVTVR2	12837.9	22568.9	16509.6
Q63493	Q63493	CD1D_RAT	Cd1d	Antigen-presenting glycoprotein CD1d	1	TDSVVWLGDLQTHR	TDSVVWLGDLQTHR	2	TDSVVWLGDLQTHR2	22962.3	28562.2	22591.1
Q63493	Q63493	CD1D_RAT	Cd1d	Antigen-presenting glycoprotein CD1d	1	TDSVVWLGDLQTHR	TDSVVWLGDLQTHR	3	TDSVVWLGDLQTHR3	91582.6	61737.2	95275.9
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	TDTCMSTNGLLCSGR	TDTC(UniMod:4)MSTNGLLC(UniMod:4)SGR	2	TDTC(UniMod:4)MSTNGLLC(UniMod:4)SGR2	2.22516e+06	2.09998e+06	2.60344e+06
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	TDTCMSTNGLLCSGR	TDTC(UniMod:4)MSTNGLLC(UniMod:4)SGR	3	TDTC(UniMod:4)MSTNGLLC(UniMod:4)SGR3	63806.8	51581.5	71444.9
Q6AY39	Q6AY39	B3GL1_RAT	B3galnt1	UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1	1	TDTDVFINTGNLVK	TDTDVFINTGNLVK	2	TDTDVFINTGNLVK2	4642.41	4922.84	6036.46
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	TDTGENNNVFNLSPVEK	TDTGENNNVFNLSPVEK	2	TDTGENNNVFNLSPVEK2	25872.5	28659.6	34381.8
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	TDTGENNNVFNLSPVEK	TDTGENNNVFNLSPVEK	3	TDTGENNNVFNLSPVEK3	4976.1	7797.9	
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	TDTGEPMGR	TDTGEPMGR	2	TDTGEPMGR2	2.21206e+06	2.48392e+06	2.34536e+06
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	TDTLLYSVLPPSVANELR	TDTLLYSVLPPSVANELR	3	TDTLLYSVLPPSVANELR3	35793.9	37473.7	34216.5
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	TDTVANQGTK	TDTVANQGTK	2	TDTVANQGTK2			16580
Q6AYK6	Q6AYK6	CYBP_RAT	Cacybp	Calcyclin-binding protein	1	TDTVIILCR	TDTVIILC(UniMod:4)R	2	TDTVIILC(UniMod:4)R2	99753.6	83214.6	90308.9
P28037	P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1	TDVAAPFGGFK	TDVAAPFGGFK	2	TDVAAPFGGFK2	14589.2	16577.4	23379.8
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	TDVFQSLR	TDVFQSLR	2	TDVFQSLR2		6170.18	2668.25
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	TDVIILPEAVEWIK	TDVIILPEAVEWIK	2	TDVIILPEAVEWIK2	13750.5	11091.6	19374.8
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	TDVILDFVLPR	TDVILDFVLPR	2	TDVILDFVLPR2	10768	5168.56	8005.7
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	TDVLGVPEAEAEEPEAGK	TDVLGVPEAEAEEPEAGK	2	TDVLGVPEAEAEEPEAGK2	63354.5	61702.5	58902.2
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	TDVLGVPEAEAEEPEAGK	TDVLGVPEAEAEEPEAGK	3	TDVLGVPEAEAEEPEAGK3	1529.52		
Q5PQJ6	Q5PQJ6	P5CR3_RAT	Pycr3	Pyrroline-5-carboxylate reductase 3	1	TDVLTPAGTTIHGLHALEQGGFR	TDVLTPAGTTIHGLHALEQGGFR	4	TDVLTPAGTTIHGLHALEQGGFR4	24447.3	21667	26541.6
P70541	P70541	EI2BG_RAT	Eif2b3	Translation initiation factor eIF-2B subunit gamma	1	TDVLVLGCDLITDVALHEVVDLFR	TDVLVLGC(UniMod:4)DLITDVALHEVVDLFR	3	TDVLVLGC(UniMod:4)DLITDVALHEVVDLFR3	7262.31		
P36970	P36970	GPX4_RAT	Gpx4	Phospholipid hydroperoxide glutathione peroxidase	1	TDVNYTQLVDLHAR	TDVNYTQLVDLHAR	2	TDVNYTQLVDLHAR2	15857.1	11394.6	19078.6
P36970	P36970	GPX4_RAT	Gpx4	Phospholipid hydroperoxide glutathione peroxidase	1	TDVNYTQLVDLHAR	TDVNYTQLVDLHAR	3	TDVNYTQLVDLHAR3	86522.4	75739.6	85006.4
Q5XIN7	Q5XIN7	PMGT1_RAT	Pomgnt1	Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1	1	TDVPLSSAEEAECHWADTELNR	TDVPLSSAEEAEC(UniMod:4)HWADTELNR	3	TDVPLSSAEEAEC(UniMod:4)HWADTELNR3	3995.19	5436.72	4306.73
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	TDVTQQLNTLFQDK	TDVTQQLNTLFQDK	2	TDVTQQLNTLFQDK2	20789.3	7.91842e+06	10680.3
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	TDVTQQLNTLFQDK	TDVTQQLNTLFQDK	3	TDVTQQLNTLFQDK3	461323	519248	492216
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	TDVTVVR	TDVTVVR	2	TDVTVVR2	44320.1	38349.5	36226
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	TDVVTGFDPLSLLVAETEQQQK	TDVVTGFDPLSLLVAETEQQQK	3	TDVVTGFDPLSLLVAETEQQQK3	4461.47		
Q3T1I4	Q3T1I4	PRRC1_RAT	Prrc1	Protein PRRC1	1	TDWHLAFTGMSR	TDWHLAFTGMSR	3	TDWHLAFTGMSR3	25237.5	22743.6	23171.3
P49651	P49651	P2RY1_RAT	P2ry1	P2Y purinoceptor 1	1	TDWIFGDVMCK	TDWIFGDVMC(UniMod:4)K	2	TDWIFGDVMC(UniMod:4)K2	8118.99	3107.87	7028.37
P29117	A0A8I6GGK9;P29117	PPIF_RAT	Ppif	Peptidyl-prolyl cis-trans isomerase F, mitochondrial	0	TDWLDGK	TDWLDGK	1	TDWLDGK1	28436.5	32570	28156
P29117	A0A8I6GGK9;P29117	PPIF_RAT	Ppif	Peptidyl-prolyl cis-trans isomerase F, mitochondrial	0	TDWLDGK	TDWLDGK	2	TDWLDGK2	1.18193e+06	1.0975e+06	1.22877e+06
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	TDWSSGDASRPSSDSADSPK	TDWSSGDASRPSSDSADSPK	3	TDWSSGDASRPSSDSADSPK3	78746.1	117514	83075.2
P97881	P97881	MUC13_RAT	Muc13	Mucin-13	1	TDYGQTVILK	TDYGQTVILK	2	TDYGQTVILK2	17660.6	8914.73	14653.6
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	TDYLTVDQLVSFLNEHQR	TDYLTVDQLVSFLNEHQR	3	TDYLTVDQLVSFLNEHQR3	21137.9	17028.7	31047.3
Q5XI73	Q5XI73	GDIR1_RAT	Arhgdia	Rho GDP-dissociation inhibitor 1	1	TDYMVGSYGPR	TDYMVGSYGPR	2	TDYMVGSYGPR2	581403	579412	611738
Q5XI73	Q5XI73	GDIR1_RAT	Arhgdia	Rho GDP-dissociation inhibitor 1	1	TDYMVGSYGPR	TDYMVGSYGPR	3	TDYMVGSYGPR3	3074.45		5870.62
P61980	A0A8I5ZZG4;P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	TDYNASVSVPDSSGPER	TDYNASVSVPDSSGPER	2	TDYNASVSVPDSSGPER2	147995	156219	174507
P61980	A0A8I5ZZG4;P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	TDYNASVSVPDSSGPER	TDYNASVSVPDSSGPER	3	TDYNASVSVPDSSGPER3	18901.4	26450.1	18225.5
B0BNI5	B0BNI5	OLFL3_RAT	Olfml3	Olfactomedin-like protein 3	1	TEADSISGR	TEADSISGR	2	TEADSISGR2	99446.7	97775	86647.7
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	TEAEDYVMAVVDK	TEAEDYVMAVVDK	2	TEAEDYVMAVVDK2	8820.36	8477.43	8751.11
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	TEAEIAHIALETLEGHQR	TEAEIAHIALETLEGHQR	3	TEAEIAHIALETLEGHQR3	23379.8	18245.7	29450.4
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	TEAEIAHIALETLEGHQR	TEAEIAHIALETLEGHQR	4	TEAEIAHIALETLEGHQR4	34010.2	26105.5	34954.8
P30427	P30427	PLEC_RAT	Plec	Plectin	1	TEAEIALK	TEAEIALK	2	TEAEIALK2			26096.2
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	TEAELLELTVK	TEAELLELTVK	2	TEAELLELTVK2	156761	152890	144450
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	TEAELLELTVK	TEAELLELTVK	3	TEAELLELTVK3	1451.92		2805.35
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	TEAESGLLFYMAR	TEAESGLLFYMAR	2	TEAESGLLFYMAR2	5649.33	5095.4	
Q6P6Q2	Q6P6Q2	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	1	TEAESWYQTK	TEAESWYQTK	2	TEAESWYQTK2	126818	102673	73683.5
D3ZHR2	D3ZHR2	ABCD1_RAT	Abcd1	ATP-binding cassette sub-family D member 1	1	TEAFTIAR	TEAFTIAR	2	TEAFTIAR2	18531.1	38407.6	15033.6
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	TEAGEAETGILQTR	TEAGEAETGILQTR	2	TEAGEAETGILQTR2	17672.3	22119.9	20390.1
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	TEAGEAETGILQTR	TEAGEAETGILQTR	3	TEAGEAETGILQTR3	6606.29	6915.93	8976.53
Q3ZU82	Q3ZU82	GOGA5_RAT	Golga5	Golgin subfamily A member 5	1	TEALEALQSEK	TEALEALQSEK	2	TEALEALQSEK2	13811.5	12472.9	17671.3
P29826	P29826;P06341	HB2B_RAT	RT1-Bb	Rano class II histocompatibility antigen, B-1 beta chain	0	TEALNHHNLLVCSVTDFYPAQIK	TEALNHHNLLVC(UniMod:4)SVTDFYPAQIK	4	TEALNHHNLLVC(UniMod:4)SVTDFYPAQIK4		5680.92	
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	TEALTQAFR	TEALTQAFR	2	TEALTQAFR2	125234	127924	138960
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	TEALTSAK	TEALTSAK	1	TEALTSAK1	35893.8	33837.6	38140.9
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	TEALTSAK	TEALTSAK	2	TEALTSAK2		5.91853e+06	
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	TEAMSSLDIR	TEAMSSLDIR	2	TEAMSSLDIR2	596171	692092	725628
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	TEAPEDVDLDLK	TEAPEDVDLDLK	2	TEAPEDVDLDLK2	79130.2	82091.1	54911.8
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	TEAPEDVDLDLKK	TEAPEDVDLDLKK	2	TEAPEDVDLDLKK2	17315.5	15496.6	15858
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	TEAPEDVDLDLKK	TEAPEDVDLDLKK	3	TEAPEDVDLDLKK3	126884	142920	134185
Q9QZR8	Q9QZR8	PDZD2_RAT	Pdzd2	PDZ domain-containing protein 2	1	TEAPLSDSNDK	TEAPLSDSNDK	2	TEAPLSDSNDK2	6319.14	4016.75	9120.56
Q9Z269	Q9Z269	VAPB_RAT	Vapb	Vesicle-associated membrane protein-associated protein B	1	TEAPVAAKPLTSPLDDAEVK	TEAPVAAKPLTSPLDDAEVK	3	TEAPVAAKPLTSPLDDAEVK3	46056.5	38549.4	44068.7
Q9Z269	Q9Z269	VAPB_RAT	Vapb	Vesicle-associated membrane protein-associated protein B	1	TEAPVAAKPLTSPLDDAEVKK	TEAPVAAKPLTSPLDDAEVKK	3	TEAPVAAKPLTSPLDDAEVKK3	32588.1	23623.7	40198.5
Q9Z269	Q9Z269	VAPB_RAT	Vapb	Vesicle-associated membrane protein-associated protein B	1	TEAPVAAKPLTSPLDDAEVKK	TEAPVAAKPLTSPLDDAEVKK	4	TEAPVAAKPLTSPLDDAEVKK4	55311.4	51323.5	71426.9
Q3MIE7	Q3MIE7	Q3MIE7_RAT	Commd9	COMM domain containing 9	1	TEAQANQISLPR	TEAQANQISLPR	2	TEAQANQISLPR2	4463.77	2166.83	
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	TEAQAQELR	TEAQAQELR	2	TEAQAQELR2	130357	154076	149453
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	TEATGVTGQASSLLSGR	TEATGVTGQASSLLSGR	2	TEATGVTGQASSLLSGR2	1661.57	6008.91	2682.83
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	TEATLEDEQTR	TEATLEDEQTR	2	TEATLEDEQTR2	36361.6	11499.5	29063.2
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	TEATLEDEQTRR	TEATLEDEQTRR	3	TEATLEDEQTRR3	144837	140543	136126
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	TEAVAIMCK	TEAVAIMC(UniMod:4)K	2	TEAVAIMC(UniMod:4)K2	53582.1	67480.3	67524
Q9Z311	Q9Z311	MECR_RAT	Mecr	Enoyl-[acyl-carrier-protein] reductase, mitochondrial	1	TEAVFSEEALIGVPK	TEAVFSEEALIGVPK	2	TEAVFSEEALIGVPK2	5132.11	3484.09	3624.17
P43253	P43253	PI2R_RAT	Ptgir	Prostacyclin receptor	1	TEAVVACSLC	TEAVVAC(UniMod:4)SLC(UniMod:4)	2	TEAVVAC(UniMod:4)SLC(UniMod:4)2	3563.01	4856.18	8340.47
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	TEAYEYAQSLGAHTCSLPNFQVFK	TEAYEYAQSLGAHTC(UniMod:4)SLPNFQVFK	3	TEAYEYAQSLGAHTC(UniMod:4)SLPNFQVFK3	9459.71	10531.1	8778.48
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	TECDIQDVEFAR	TEC(UniMod:4)DIQDVEFAR	2	TEC(UniMod:4)DIQDVEFAR2	77550.2	66985.2	75816.3
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	TECDIQDVEFAR	TEC(UniMod:4)DIQDVEFAR	3	TEC(UniMod:4)DIQDVEFAR3	3411.78		5091.51
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	TECGCQFTSK	TEC(UniMod:4)GC(UniMod:4)QFTSK	2	TEC(UniMod:4)GC(UniMod:4)QFTSK2	25689.8	29686.1	32328.2
Q64542	Q64542	AT2B4_RAT	Atp2b4	Plasma membrane calcium-transporting ATPase 4	1	TECGLLGFVTDLK	TEC(UniMod:4)GLLGFVTDLK	2	TEC(UniMod:4)GLLGFVTDLK2	13936.2	21023.2	20462.6
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	TECLKPVVQDVLTISPFQSVYK	TEC(UniMod:4)LKPVVQDVLTISPFQSVYK	3	TEC(UniMod:4)LKPVVQDVLTISPFQSVYK3	128890	123929	113139
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	TECLKPVVQDVLTISPFQSVYK	TEC(UniMod:4)LKPVVQDVLTISPFQSVYK	4	TEC(UniMod:4)LKPVVQDVLTISPFQSVYK4	8278.59	17196.2	5685.16
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	TECNHYNNIMALYLK	TEC(UniMod:4)NHYNNIMALYLK	3	TEC(UniMod:4)NHYNNIMALYLK3	35768	28421.4	23258.3
P53042	P53042	PPP5_RAT	Ppp5c	Serine/threonine-protein phosphatase 5	1	TECYGYALGDATR	TEC(UniMod:4)YGYALGDATR	2	TEC(UniMod:4)YGYALGDATR2	2711.03	2637.97	5021.64
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	TEDAEEDAEARPEPEVR	TEDAEEDAEARPEPEVR	3	TEDAEEDAEARPEPEVR3	97730.5	117487	127756
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	TEDALLSWADFSK	TEDALLSWADFSK	2	TEDALLSWADFSK2	22874.5	30301.8	24634.1
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	TEDDADREAQLLEMR	TEDDADREAQLLEMR	3	TEDDADREAQLLEMR3	39394.7	50248.3	54391.4
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	TEDDSLVVWK	TEDDSLVVWK	2	TEDDSLVVWK2	4559.87	6032.66	11743
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	TEDEFKK	TEDEFKK	2	TEDEFKK2			8406.38
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	TEDETNNLTEVSSADQLDASK	TEDETNNLTEVSSADQLDASK	3	TEDETNNLTEVSSADQLDASK3	19741.7	22714.7	30219.4
P24155	P24155	THOP1_RAT	Thop1	Thimet oligopeptidase	1	TEDGKLK	TEDGKLK	1	TEDGKLK1			11650.2
P24155	P24155	THOP1_RAT	Thop1	Thimet oligopeptidase	1	TEDGKLK	TEDGKLK	2	TEDGKLK2			57489.6
Q496Z0	Q496Z0	ELP2_RAT	Elp2	Elongator complex protein 2	1	TEDGSPSTELVSGASDNR	TEDGSPSTELVSGASDNR	2	TEDGSPSTELVSGASDNR2	8148.26	4901.27	9845.82
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	TEDIEQDGELEGPVIDESVLSTK	TEDIEQDGELEGPVIDESVLSTK	3	TEDIEQDGELEGPVIDESVLSTK3	1783.79	2655.85	1380.99
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	TEDLACMYK	TEDLAC(UniMod:4)MYK	2	TEDLAC(UniMod:4)MYK2	23277.6	27934	20242.3
Q9WUF4	Q9WUF4	VAMP8_RAT	Vamp8	Vesicle-associated membrane protein 8	1	TEDLEATSEHFK	TEDLEATSEHFK	2	TEDLEATSEHFK2	32133.5	29082.2	35418.3
Q9WUF4	Q9WUF4	VAMP8_RAT	Vamp8	Vesicle-associated membrane protein 8	1	TEDLEATSEHFK	TEDLEATSEHFK	3	TEDLEATSEHFK3	154532	121069	161015
D3ZPD0	D3ZPD0	D3ZPD0_RAT	Ckap2	Cytoskeleton associated protein 2	1	TEDPTNDLTTPDSK	TEDPTNDLTTPDSK	2	TEDPTNDLTTPDSK2	1594.92	1287.32	1642.69
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	TEDQFSVVDFNHNVR	TEDQFSVVDFNHNVR	2	TEDQFSVVDFNHNVR2	2.72368e+06	2.44629e+06	2.24852e+06
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	TEDQFSVVDFNHNVR	TEDQFSVVDFNHNVR	3	TEDQFSVVDFNHNVR3	43504.4	59314.1	47014
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	TEDQFSVVDFNHNVR	TEDQFSVVDFNHNVR	4	TEDQFSVVDFNHNVR4	7853.88	7359.29	2010.62
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TEDSGLQTQVIAAATQCALSTSQLVACTK	TEDSGLQTQVIAAATQC(UniMod:4)ALSTSQLVAC(UniMod:4)TK	4	TEDSGLQTQVIAAATQC(UniMod:4)ALSTSQLVAC(UniMod:4)TK4	45795.2	46144	57018.3
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	TEDSSLQEK	TEDSSLQEK	2	TEDSSLQEK2	15870.5		9739.74
A0A8I6A9Q7	A0A8I6A9Q7;A0A8I6A5B2	A0A8I6A9Q7_RAT	ENSRNOG00000070891	Ig-like domain-containing protein	0	TEDTAIYYCTR	TEDTAIYYC(UniMod:4)TR	2	TEDTAIYYC(UniMod:4)TR2	4414.83	4517.86	8429.25
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	TEDTEHVVIPVCLR	TEDTEHVVIPVC(UniMod:4)LR	2	TEDTEHVVIPVC(UniMod:4)LR2	1977.03	7371.6	4207.61
D4ACR1	D4ACR1	D4ACR1_RAT	LOC100360761	Ig-like domain-containing protein	1	TEDTGIYYCAR	TEDTGIYYC(UniMod:4)AR	3	TEDTGIYYC(UniMod:4)AR3	17425.4	10668.4	9646.06
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	TEDTQQWQQQGR	TEDTQQWQQQGR	2	TEDTQQWQQQGR2	95205.8	94231.4	112023
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	TEDTQQWQQQGR	TEDTQQWQQQGR	3	TEDTQQWQQQGR3	8164.44	5786.24	6437.65
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	TEDVEPQSVPLLAR	TEDVEPQSVPLLAR	2	TEDVEPQSVPLLAR2	52365.1	41035	62797.1
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	TEDVLLR	TEDVLLR	2	TEDVLLR2	17921.8	11825.3	17900.2
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	TEDVMFISDNESFNPALWEEQR	TEDVMFISDNESFNPALWEEQR	3	TEDVMFISDNESFNPALWEEQR3	10337.7		13455.6
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	TEDVMFISDNESFNPALWEEQRK	TEDVMFISDNESFNPALWEEQRK	3	TEDVMFISDNESFNPALWEEQRK3	79283.7	85818.3	72188
A0A8I6AGL0	A0A8I6AGL0	A0A8I6AGL0_RAT	Ankrd44	Ankyrin repeat domain 44	1	TEDVNALDSEK	TEDVNALDSEK	2	TEDVNALDSEK2	8645.24	9585.68	2287.26
D3ZDW3	D3ZDW3	D3ZDW3_RAT	Tsc22d2	TSC22 domain family, member 2	1	TEDVSSEIFDVSR	TEDVSSEIFDVSR	2	TEDVSSEIFDVSR2		4420.64	6318.45
E9PT20	E9PT20	E9PT20_RAT	Abl1	Tyrosine-protein kinase	1	TEEAAEDVFK	TEEAAEDVFK	2	TEEAAEDVFK2	5376.87	4938.26	
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	TEECQLQLK	TEEC(UniMod:4)QLQLK	2	TEEC(UniMod:4)QLQLK2	2197.85	2820.4	
Q9JKC9	Q9JKC9	SYNRG_RAT	Synrg	Synergin gamma	1	TEEDDFQDFQDASK	TEEDDFQDFQDASK	2	TEEDDFQDFQDASK2	5135.12	2919.54	4276.44
A0A0G2QC33	A0A0G2QC33	ATG4B_RAT	Atg4b	Cysteine protease ATG4B	1	TEEDFNDWCQQVK	TEEDFNDWC(UniMod:4)QQVK	2	TEEDFNDWC(UniMod:4)QQVK2	15818.8	26603.5	23868.1
P01048	P08932;A0A0G2KA54;P01048	KNT1_RAT	Map1	T-kininogen 1	0	TEEDLCVGCFQPIPMDSSDLKPVLK	TEEDLC(UniMod:4)VGC(UniMod:4)FQPIPMDSSDLKPVLK	3	TEEDLC(UniMod:4)VGC(UniMod:4)FQPIPMDSSDLKPVLK3	395703	370057	339985
P01048	P08932;A0A0G2KA54;P01048	KNT1_RAT	Map1	T-kininogen 1	0	TEEDLCVGCFQPIPMDSSDLKPVLK	TEEDLC(UniMod:4)VGC(UniMod:4)FQPIPMDSSDLKPVLK	4	TEEDLC(UniMod:4)VGC(UniMod:4)FQPIPMDSSDLKPVLK4	46630	42310.2	49540.1
P49806	P49806	RGS10_RAT	Rgs10	Regulator of G-protein signaling 10	1	TEEEEEDPPDAQTAAK	TEEEEEDPPDAQTAAK	2	TEEEEEDPPDAQTAAK2	21154.5	19184.1	11286.2
Q5GFD9	Q5GFD9	IMPCT_RAT	Impact	Protein IMPACT	1	TEEEEVEGEDDPILEHPPENPVK	TEEEEVEGEDDPILEHPPENPVK	3	TEEEEVEGEDDPILEHPPENPVK3	22076.9	14190.6	27775.1
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	TEEEFQLLQIFR	TEEEFQLLQIFR	2	TEEEFQLLQIFR2	90914.9	54689.8	74932.8
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	TEEEFQLLQIFR	TEEEFQLLQIFR	3	TEEEFQLLQIFR3	1045.36		3416.22
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	TEEELSEEK	TEEELSEEK	2	TEEELSEEK2	8952.28	4247.46	6650.67
Q792I0	Q792I0	LIN7C_RAT	Lin7c	Protein lin-7 homolog C	1	TEEGLGFNIMGGK	TEEGLGFNIMGGK	2	TEEGLGFNIMGGK2	31585.2	28820	42436.1
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	TEEGTSKPLK	TEEGTSKPLK	2	TEEGTSKPLK2			4697.67
A1KQY6	A1KQY6	A1KQY6_RAT	St8sia4	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	1	TEEHQETQLIGDGELCLSR	TEEHQETQLIGDGELC(UniMod:4)LSR	3	TEEHQETQLIGDGELC(UniMod:4)LSR3	16081	7898.3	12671.6
O88277	O88277	FAT2_RAT	Fat2	Protocadherin Fat 2	1	TEEHVVGNFCFLR	TEEHVVGNFC(UniMod:4)FLR	3	TEEHVVGNFC(UniMod:4)FLR3	2819.03	4433.39	4524
A0A0G2K8Z9	D3ZM20;A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	0	TEEIAQER	TEEIAQER	2	TEEIAQER2	47933.4	42952.6	41524.9
D3ZMI6	D3ZMI6	D3ZMI6_RAT	Olfm4	Olfactomedin 4	1	TEEIFYYYDTNTQR	TEEIFYYYDTNTQR	2	TEEIFYYYDTNTQR2	106888	98020.7	106283
D3ZMI6	D3ZMI6	D3ZMI6_RAT	Olfm4	Olfactomedin 4	1	TEEIFYYYDTNTQR	TEEIFYYYDTNTQR	3	TEEIFYYYDTNTQR3	24879.5	27506.6	24658.1
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	TEEISEVK	TEEISEVK	2	TEEISEVK2	100591	128679	116296
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	TEEIVNGMIEAAKPVYTLDCPLAAAK	TEEIVNGMIEAAKPVYTLDC(UniMod:4)PLAAAK	3	TEEIVNGMIEAAKPVYTLDC(UniMod:4)PLAAAK3		10602.2	8245.64
Q6AYD9	Q6AYD9	NUD19_RAT	Nudt19	Acyl-coenzyme A diphosphatase NUDT19	1	TEEIVTEGK	TEEIVTEGK	2	TEEIVTEGK2	6946.16	6366.6	3878.39
Q5RJQ0	Q5RJQ0	CHST1_RAT	Chst1	Carbohydrate sulfotransferase 1	1	TEEIYEFLGIPLDSHVAR	TEEIYEFLGIPLDSHVAR	3	TEEIYEFLGIPLDSHVAR3	46389.5	31011.7	29544.2
A0A8I6A6H8	A0A8I6A6H8	A0A8I6A6H8_RAT	Serpinb6a	Serpin family B member 6A	1	TEEKPVQMMFMK	TEEKPVQMMFMK	2	TEEKPVQMMFMK2	10485.2	11277.1	8644.72
A0A8I6A6H8	A0A8I6A6H8	A0A8I6A6H8_RAT	Serpinb6a	Serpin family B member 6A	1	TEEKPVQMMFMK	TEEKPVQMMFMK	3	TEEKPVQMMFMK3	58047.8	26815.3	46340.2
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	TEELFVGEK	TEELFVGEK	2	TEELFVGEK2	40945.9	48367.3	36953.3
D4A830	D4A830	D4A830_RAT	Ppa2	inorganic diphosphatase	1	TEELGHPR	TEELGHPR	2	TEELGHPR2	8774.35		10504.4
F7F5P9	F7F5P9	F7F5P9_RAT	G3bp2	G3BP stress granule assembly factor 2	1	TEELKPQAEEK	TEELKPQAEEK	2	TEELKPQAEEK2	5057.35	6420.81	5158.27
F7F5P9	F7F5P9	F7F5P9_RAT	G3bp2	G3BP stress granule assembly factor 2	1	TEELKPQAEEK	TEELKPQAEEK	3	TEELKPQAEEK3	156026	141279	161221
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	TEELLTENSPTGSMR	TEELLTENSPTGSMR	2	TEELLTENSPTGSMR2	8306.4	8035.26	10046.3
Q6IFU8	Q6IFV1;Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	0	TEELNREVATNSELVQSGK	TEELNREVATNSELVQSGK	3	TEELNREVATNSELVQSGK3	1808.31	4448.96	6350.05
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	TEELQDLK	TEELQDLK	2	TEELQDLK2	43148.3	51807.8	47374.5
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	TEELQDLKEEEEEQK	TEELQDLKEEEEEQK	2	TEELQDLKEEEEEQK2	8785.46	8585.59	5757.67
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	TEELQDLKEEEEEQK	TEELQDLKEEEEEQK	3	TEELQDLKEEEEEQK3	201271	184364	211871
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	TEERAELAESR	TEERAELAESR	2	TEERAELAESR2	5952.23	10205.2	9069.04
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	TEERAELAESR	TEERAELAESR	3	TEERAELAESR3	136627	207851	238336
Q6P6Q2	A0A8I5ZMI8;Q6P6Q2;A0A0G2JUG1;A0A8I6G380;Q4FZU2;A0A8I6AP90	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	0	TEEREQIK	TEEREQIK	2	TEEREQIK2			9866.79
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	TEEVLSPDGSPSK	TEEVLSPDGSPSK	2	TEEVLSPDGSPSK2	34200.5	29885.5	33784.7
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	TEEVMELTDEQR	TEEVMELTDEQR	2	TEEVMELTDEQR2	2536.63	2026.6	1719.78
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	TEEVMELTDEQRNELMK	TEEVMELTDEQRNELMK	3	TEEVMELTDEQRNELMK3	6066.91	26022.3	13419.1
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	TEEVPKPK	TEEVPKPK	2	TEEVPKPK2	36117.3	45516.8	33703
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	TEEVSAIEIVGGATR	TEEVSAIEIVGGATR	2	TEEVSAIEIVGGATR2	24202.1	19261.2	21993.7
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	TEEVSAIEIVGGATR	TEEVSAIEIVGGATR	3	TEEVSAIEIVGGATR3	5593.49	9108.51	7613.64
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	TEEVSNLK	TEEVSNLK	2	TEEVSNLK2	18915.5	25861.2	28950.7
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	TEFDRELDR	TEFDRELDR	2	TEFDRELDR2	4977.99	4673.95	5662.45
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	TEFDRELDR	TEFDRELDR	3	TEFDRELDR3	196583	176748	179787
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	TEFGMAIGPENSGK	TEFGMAIGPENSGK	2	TEFGMAIGPENSGK2	275200	274680	281765
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	TEFIPLLDGDEK	TEFIPLLDGDEK	2	TEFIPLLDGDEK2	35525.7	36881.5	37515.1
Q62867	Q62867	GGH_RAT	Ggh	Gamma-glutamyl hydrolase	1	TEFISSMEGYK	TEFISSMEGYK	2	TEFISSMEGYK2	7169.65	4318.52	7205.69
Q6B345	Q6B345;F1LYQ0	S10AB_RAT	S100a11	Protein S100-A11	0	TEFLSFMNTELAAFTK	TEFLSFMNTELAAFTK	2	TEFLSFMNTELAAFTK2	7466.39	3461.45	9658.6
Q6B345	Q6B345;F1LYQ0	S10AB_RAT	S100a11	Protein S100-A11	0	TEFLSFMNTELAAFTK	TEFLSFMNTELAAFTK	3	TEFLSFMNTELAAFTK3	3453.95	1205.15	
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	TEFQEAK	TEFQEAK	2	TEFQEAK2	67453.9	88048.6	77660.2
P55146	P55146	TYRO3_RAT	Tyro3	Tyrosine-protein kinase receptor TYRO3	1	TEFSCEAHNIK	TEFSC(UniMod:4)EAHNIK	3	TEFSC(UniMod:4)EAHNIK3	27672.2	22214.3	28514.6
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	TEFSEENIEFWVACEDFKK	TEFSEENIEFWVAC(UniMod:4)EDFKK	3	TEFSEENIEFWVAC(UniMod:4)EDFKK3	30537.2	31711.8	45041.2
Q63862	Q63862	MYH11_RAT	Myh11	Myosin-11	1	TEFSIIHYAGK	TEFSIIHYAGK	3	TEFSIIHYAGK3	6539.42	10865.1	10108.6
P97523	P97523	MET_RAT	Met	Hepatocyte growth factor receptor	1	TEFTTALQR	TEFTTALQR	2	TEFTTALQR2	6603.38	5922.28	4312.16
A0A0G2K7W5	A0A0G2K7W5	A0A0G2K7W5_RAT	Ahsa2	Activator of HSP90 ATPase homolog 2	1	TEFTTGMILPTK	TEFTTGMILPTK	2	TEFTTGMILPTK2	3206.78	6996.53	3611.28
F1MAF8	F1MAF8	F1MAF8_RAT	Atg2b	Autophagy related 2B	1	TEFVGGATPEQTK	TEFVGGATPEQTK	2	TEFVGGATPEQTK2	4371.22		4234.55
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	TEGDIFAIVSK	TEGDIFAIVSK	2	TEGDIFAIVSK2	16482.7	15953.1	22064.8
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	TEGDSQDMVR	TEGDSQDMVR	2	TEGDSQDMVR2	27595.7	30851.3	23735.1
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	TEGEERANLSSQILK	TEGEERANLSSQILK	3	TEGEERANLSSQILK3	25440.7	21143.3	22534.8
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	TEGFTLNPPLAQPAVISR	TEGFTLNPPLAQPAVISR	2	TEGFTLNPPLAQPAVISR2	41534.3	45575.3	37895.2
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	TEGFTLNPPLAQPAVISR	TEGFTLNPPLAQPAVISR	3	TEGFTLNPPLAQPAVISR3	119330	112313	83391.7
Q29RW1	Q29RW1	MYH4_RAT	Myh4	Myosin-4	1	TEGGATVTVK	TEGGATVTVK	2	TEGGATVTVK2	9991.8		
P19836	P19836;Q9QZC4	PCY1A_RAT	Pcyt1a	Choline-phosphate cytidylyltransferase A	0	TEGISTSDIITR	TEGISTSDIITR	2	TEGISTSDIITR2	2160.59	4472.44	2749.18
B0BNI6	B0BNI6	B0BNI6_RAT	Slc25a35	Solute carrier family 25, member 35	1	TEGLFGMYK	TEGLFGMYK	2	TEGLFGMYK2	12044.7	13268.9	10326.5
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	TEGLSVLNQAMAVIK	TEGLSVLNQAMAVIK	2	TEGLSVLNQAMAVIK2	186094	94281.1	134047
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	TEGLSVLNQAMAVIK	TEGLSVLNQAMAVIK	3	TEGLSVLNQAMAVIK3	6057.39	5893.08	4189.41
D3ZK09	D3ZK09	D3ZK09_RAT	Scyl3	SCY1 like pseudokinase 3	1	TEGMVPDKDTVSPVMQFSSK	TEGMVPDKDTVSPVMQFSSK	3	TEGMVPDKDTVSPVMQFSSK3	9524.98	15665.8	
O70593	O70593	SGTA_RAT	Sgta	Small glutamine-rich tetratricopeptide repeat-containing protein alpha	1	TEGNEQMK	TEGNEQMK	2	TEGNEQMK2			185715
P14630	P14630	APOM_RAT	Apom	Apolipoprotein M	1	TEGRPDMK	TEGRPDMK	1	TEGRPDMK1			55973.5
P14630	P14630	APOM_RAT	Apom	Apolipoprotein M	1	TEGRPDMK	TEGRPDMK	2	TEGRPDMK2			804997
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	TEGSDGAVSLSSADAQDSLEKEK	TEGSDGAVSLSSADAQDSLEKEK	3	TEGSDGAVSLSSADAQDSLEKEK3	4695.75	14112.6	8459.05
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	TEGSDLCDR	TEGSDLC(UniMod:4)DR	2	TEGSDLC(UniMod:4)DR2	433000	402641	446047
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	TEGSSLLPSDLPLR	TEGSSLLPSDLPLR	2	TEGSSLLPSDLPLR2	19594.8	13551.1	13424.9
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	TEGSSLLPSDLPLRIEDPGSAK	TEGSSLLPSDLPLRIEDPGSAK	3	TEGSSLLPSDLPLRIEDPGSAK3		11909.4	6319.37
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	TEGVQDADTQSLVGSPSTR	TEGVQDADTQSLVGSPSTR	2	TEGVQDADTQSLVGSPSTR2	11253.6	9247.89	15241
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	TEGVQDADTQSLVGSPSTR	TEGVQDADTQSLVGSPSTR	3	TEGVQDADTQSLVGSPSTR3	10075.4	10972.3	10228.2
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	TEGVSNQVK	TEGVSNQVK	2	TEGVSNQVK2	185389	86701.6	98760
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	TEGVTALPYFLFK	TEGVTALPYFLFK	2	TEGVTALPYFLFK2	36413	39571.8	28835.6
A0A8I6AUQ7	A0A8I6AUQ7	A0A8I6AUQ7_RAT	Zpr1	ZPR1 zinc finger	1	TEGYEADLAPQR	TEGYEADLAPQR	2	TEGYEADLAPQR2	6073.24	5145.44	4763.1
Q5XIK7	Q5XIK7	KATL1_RAT	Katnal1	Katanin p60 ATPase-containing subunit A-like 1	1	TEGYSGADITNICR	TEGYSGADITNIC(UniMod:4)R	2	TEGYSGADITNIC(UniMod:4)R2	3270.4	3474.87	4732.7
Q63616	Q63616	VP33B_RAT	Vps33b	Vacuolar protein sorting-associated protein 33B	1	TEHALLEGFNIR	TEHALLEGFNIR	3	TEHALLEGFNIR3	22248.3	14562.2	15461.3
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	TEHFTTPAVGDSVQPSLAWPSPK	TEHFTTPAVGDSVQPSLAWPSPK	3	TEHFTTPAVGDSVQPSLAWPSPK3	54927.9	67898.6	59425.6
F7F5Q9	F7F5Q9	F7F5Q9_RAT	Hcls1	Hematopoietic cell specific Lyn substrate 1	1	TEHINIHQLR	TEHINIHQLR	2	TEHINIHQLR2	5475.12	4039.5	5066.57
F7F5Q9	F7F5Q9	F7F5Q9_RAT	Hcls1	Hematopoietic cell specific Lyn substrate 1	1	TEHINIHQLR	TEHINIHQLR	3	TEHINIHQLR3	43970.7	40473.7	25650.5
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	TEHLTEEEKK	TEHLTEEEKK	2	TEHLTEEEKK2			4616
Q4V794	Q4V794	Q4V794_RAT	Vps37a	VPS37A subunit of ESCRT-I	1	TEIDDFLNSFK	TEIDDFLNSFK	2	TEIDDFLNSFK2	11170.7	12970.7	20797
O35162	O35162	HSP13_RAT	Hspa13	Heat shock 70 kDa protein 13	1	TEIDEVVLVGGSTR	TEIDEVVLVGGSTR	2	TEIDEVVLVGGSTR2	35525.7	61589.4	
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	TEIEGTQK	TEIEGTQK	1	TEIEGTQK1	3308.48		2616.41
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	TEIEGTQK	TEIEGTQK	2	TEIEGTQK2			91055.5
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	TEIELSYAK	TEIELSYAK	2	TEIELSYAK2	48758.9	30736.6	28377.6
P62909	P62909;A0A8I6GGS4	RS3_RAT	Rps3	Small ribosomal subunit protein uS3	0	TEIIILATR	TEIIILATR	2	TEIIILATR2	37031.3	37435.4	34311.8
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	TEIITFTAMMK	TEIITFTAMMK	2	TEIITFTAMMK2	9801.98	3904.98	
A0A8I6ASR0	F7EWC5;A0A8I6ASR0	A0A8I6ASR0_RAT	Ly6c	Ly6-C antigen	0	TEILGTVVYTK	TEILGTVVYTK	2	TEILGTVVYTK2	232260	218148	192138
A0A8I5ZT10	A0A8I5ZT10	A0A8I5ZT10_RAT	Ccm2	CCM2 scaffold protein	1	TEILHFIDK	TEILHFIDK	2	TEILHFIDK2	5451.4	3353.28	
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	TEIQYEK	TEIQYEK	2	TEIQYEK2	11041.5	12540.2	
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	TEISGAEIAEEMEK	TEISGAEIAEEMEK	2	TEISGAEIAEEMEK2	12490.1	10230.5	11883.4
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	TEISGAEIAEEMEKER	TEISGAEIAEEMEKER	3	TEISGAEIAEEMEKER3	33442.6	50190.7	29150.9
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	TEISLSLTSK	TEISLSLTSK	2	TEISLSLTSK2	37229.5	56961.1	24564.8
B0BMY7	B0BMY7	B0BMY7_RAT	Twf2	Twinfilin actin-binding protein 2	1	TEISVESK	TEISVESK	2	TEISVESK2	66251.6	58584.3	59162.1
Q6IFU7	Q6IFV4;Q6IFU7	K1C42_RAT	Krt42	Keratin, type I cytoskeletal 42	0	TEITELR	TEITELR	2	TEITELR2		33986.4	
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	TEITGAEIAEEMEK	TEITGAEIAEEMEK	2	TEITGAEIAEEMEK2	20103.4	19324.8	13822.4
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	TEITGAEIAEEMEKER	TEITGAEIAEEMEKER	2	TEITGAEIAEEMEKER2		5623.92	
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	TEITGAEIAEEMEKER	TEITGAEIAEEMEKER	3	TEITGAEIAEEMEKER3	55203.4	58064.6	77725.3
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	TEIVFTGEKEQLAQAVAR	TEIVFTGEKEQLAQAVAR	3	TEIVFTGEKEQLAQAVAR3	12197.6	15597.7	19353.6
Q66H62	A0A8I6A0L1;Q66H62	CYLD_RAT	Cyld	Ubiquitin carboxyl-terminal hydrolase CYLD	0	TEIVNPLR	TEIVNPLR	2	TEIVNPLR2	9189.34	8025.69	11318.6
O88637	O88637	PCY2_RAT	Pcyt2	Ethanolamine-phosphate cytidylyltransferase	1	TEIVPDRDGSDPYEEPK	TEIVPDRDGSDPYEEPK	3	TEIVPDRDGSDPYEEPK3	7485.92	8070.01	6489.12
Q4QQT4	Q4QQT4	2AAB_RAT	Ppp2r1b	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	1	TEIVPLFTNLASDEQDSVR	TEIVPLFTNLASDEQDSVR	3	TEIVPLFTNLASDEQDSVR3	2600.41		
D3ZEJ2	D3ZEJ2	D3ZEJ2_RAT	Mcur1	Mitochondrial calcium uniporter regulator 1	1	TEIVSLHAQQDR	TEIVSLHAQQDR	3	TEIVSLHAQQDR3	20813.2	27411.1	23087.6
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	TEIWLELKPQGR	TEIWLELKPQGR	2	TEIWLELKPQGR2	15434	14368.4	7371.79
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	TEIWLELKPQGR	TEIWLELKPQGR	3	TEIWLELKPQGR3	164605	137463	127434
P18292	P18292	THRB_RAT	F2	Prothrombin	1	TEKELLDSYIDGR	TEKELLDSYIDGR	2	TEKELLDSYIDGR2	1.40775e+06	1.9115e+06	1.86748e+06
P18292	P18292	THRB_RAT	F2	Prothrombin	1	TEKELLDSYIDGR	TEKELLDSYIDGR	3	TEKELLDSYIDGR3	7.0744e+06	89601.9	9.64744e+06
D4ACD2	D4ACD2	D4ACD2_RAT	Bach1	BTB domain and CNC homolog 1	1	TEKPLLGPDAQDEKPLENQELYLK	TEKPLLGPDAQDEKPLENQELYLK	4	TEKPLLGPDAQDEKPLENQELYLK4	1691.76	3662.9	9132.83
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	TELADKVSK	TELADKVSK	2	TELADKVSK2	10497.6	18204	20254.3
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	TELADKVSKLQVELDSVTGLLNQSDSK	TELADKVSKLQVELDSVTGLLNQSDSK	3	TELADKVSKLQVELDSVTGLLNQSDSK3	685943	3.29515e+06	3.101e+06
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	TELAEPIAIRPTSETVMYPAYAK	TELAEPIAIRPTSETVMYPAYAK	3	TELAEPIAIRPTSETVMYPAYAK3	123970	169180	187267
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	TELCAEAEELR	TELC(UniMod:4)AEAEELR	2	TELC(UniMod:4)AEAEELR2	34171	21182.1	26447.7
Q5PPJ9	Q5PPJ9	SHLB2_RAT	Sh3glb2	Endophilin-B2	1	TELDAHFENLLAR	TELDAHFENLLAR	3	TELDAHFENLLAR3	32455.1	23810.7	28105.5
Q6AYE2	Q6AYE2	SHLB1_RAT	Sh3glb1	Endophilin-B1	1	TELDAHLENLLSK	TELDAHLENLLSK	2	TELDAHLENLLSK2	1940.67	3904.72	699.116
Q6AYE2	Q6AYE2	SHLB1_RAT	Sh3glb1	Endophilin-B1	1	TELDAHLENLLSK	TELDAHLENLLSK	3	TELDAHLENLLSK3	89663.6	87382.3	104958
A0A8I6AFQ3	A0A8I6AFQ3	A0A8I6AFQ3_RAT	Dtymk	dTMP kinase	1	TELEDHSVHLLFSANR	TELEDHSVHLLFSANR	3	TELEDHSVHLLFSANR3	3384.86		
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	TELEDTLDSTAAQQELR	TELEDTLDSTAAQQELR	2	TELEDTLDSTAAQQELR2	2.99255e+06	13043.2	3.54737e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	TELEDTLDSTAAQQELR	TELEDTLDSTAAQQELR	3	TELEDTLDSTAAQQELR3	6.59054e+06	30492	29414.1
Q9JLT0	Q9JLT0	MYH10_RAT	Myh10	Myosin-10	1	TELEDTLDTTAAQQELR	TELEDTLDTTAAQQELR	3	TELEDTLDTTAAQQELR3	12839.5	8048.64	10954.7
Q4KLJ8	Q4KLJ8	PDCL3_RAT	Pdcl3	Phosducin-like protein 3	1	TELEENPK	TELEENPK	2	TELEENPK2	91639.3	104728	98508.1
Q4KLJ8	Q4KLJ8	PDCL3_RAT	Pdcl3	Phosducin-like protein 3	1	TELEENPKK	TELEENPKK	2	TELEENPKK2			6032.93
Q05754	Q05754	DOPO_RAT	Dbh	Dopamine beta-hydroxylase	1	TELELCK	TELELC(UniMod:4)K	2	TELELC(UniMod:4)K2	18063.7	11879.8	15323.6
P53565	P53565;A0A8I5ZR58	CUX1_RAT	Cux1	Homeobox protein cut-like 1	0	TELFDLK	TELFDLK	2	TELFDLK2		7329.59	6671.21
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	TELGALMGTTLQR	TELGALMGTTLQR	2	TELGALMGTTLQR2	28404.8	40069.1	27935.9
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	TELGALMGTTLQR	TELGALMGTTLQR	3	TELGALMGTTLQR3	2033.12	5580.28	4917.55
Q5I0H9	Q5I0H9	PDIA5_RAT	Pdia5	Protein disulfide-isomerase A5	1	TELGFTSFIR	TELGFTSFIR	2	TELGFTSFIR2	9060.61	5051.68	1493.78
Q9Z1W6	Q9Z1W6	LYRIC_RAT	Mtdh	Protein LYRIC	1	TELGLDLGLEPK	TELGLDLGLEPK	2	TELGLDLGLEPK2	13692.3	12091.1	15676.6
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	TELHLNHLAENNVFGIVPLSKPEEK	TELHLNHLAENNVFGIVPLSKPEEK	4	TELHLNHLAENNVFGIVPLSKPEEK4		5410.27	12007.5
F1M9D6	F1M9D6	F1M9D6_RAT	Stat1	Signal transducer and activator of transcription	1	TELISVSEVHPSR	TELISVSEVHPSR	3	TELISVSEVHPSR3	9860.46	12503.4	18059.4
P51111	P51111	HD_RAT	Htt	Huntingtin	1	TELLETLAEIDFR	TELLETLAEIDFR	2	TELLETLAEIDFR2	2251.98	3735.95	3748.57
D4A9N5	D4A9N5	D4A9N5_RAT	Trim25	Tripartite motif-containing 25	1	TELLEYFVK	TELLEYFVK	2	TELLEYFVK2	19495.1	15054.3	18855.5
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	TELLLSAEAAK	TELLLSAEAAK	2	TELLLSAEAAK2	57735.8	43193.7	52523.3
F1M9B2	F1M9B2	F1M9B2_RAT	Igfbp7	Insulin-like growth factor binding protein 7	1	TELLPGDRENLAIQTR	TELLPGDRENLAIQTR	3	TELLPGDRENLAIQTR3	17587.2	9268.78	26543
D4A589	D4A589	D4A589_RAT	Smg6	Telomerase-binding protein EST1A	1	TELLQLYER	TELLQLYER	2	TELLQLYER2	4353.85	5330.3	1209.89
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	TELLQRPGIEDVAVLK	TELLQRPGIEDVAVLK	3	TELLQRPGIEDVAVLK3	61192.1	75581.7	68391.8
D3ZFK6	D3ZFK6	D3ZFK6_RAT	Atg16l1	Autophagy related 16-like 1	1	TELLSCSR	TELLSC(UniMod:4)SR	2	TELLSC(UniMod:4)SR2	14662.6	5358.37	16059.8
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	TELLTEALR	TELLTEALR	2	TELLTEALR2	41017.8	41932.2	32032
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	TELPEGR	TELPEGR	2	TELPEGR2	530837	533045	585346
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	TELPEKEVFSSSDTDPDMAFCR	TELPEKEVFSSSDTDPDMAFC(UniMod:4)R	3	TELPEKEVFSSSDTDPDMAFC(UniMod:4)R3	9512.64		9890.13
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	TELPQFVSYFQHR	TELPQFVSYFQHR	3	TELPQFVSYFQHR3	8025.81	10963.6	4941.71
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	TELPTDDVSYR	TELPTDDVSYR	2	TELPTDDVSYR2	1.37199e+06	1.67759e+06	1.44659e+06
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	TELPTDGTDSVLAVR	TELPTDGTDSVLAVR	2	TELPTDGTDSVLAVR2	44463.7	60579.4	48296.5
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	TELPTDGTDSVLAVR	TELPTDGTDSVLAVR	3	TELPTDGTDSVLAVR3	95796.2	98192.5	120674
Q5XIJ6	Q5XIJ6	BABA1_RAT	Babam1	BRISC and BRCA1-A complex member 1	1	TELPVTENVQTIPPPYVVR	TELPVTENVQTIPPPYVVR	3	TELPVTENVQTIPPPYVVR3	51529.8	57860.6	70590.5
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	TELQINIQNTR	TELQINIQNTR	2	TELQINIQNTR2	40790.3	36816	29354
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	TELQNTLR	TELQNTLR	2	TELQNTLR2	118245	135212	121430
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	TELQQLIQQK	TELQQLIQQK	2	TELQQLIQQK2		13264.6	5323.71
Q9JIX3	Q9JIX3	FHIT_RAT	Fhit	Bis(5'-adenosyl)-triphosphatase	1	TELSFALVNR	TELSFALVNR	2	TELSFALVNR2	28192.5		16154.2
P70582	P70582	NUP54_RAT	Nup54	Nuclear pore complex protein Nup54	1	TELSPAQIK	TELSPAQIK	2	TELSPAQIK2	3578.39	1832.25	
Q63186	Q63186	EI2BD_RAT	Eif2b4	Translation initiation factor eIF-2B subunit delta	1	TELSPRPGAAGR	TELSPRPGAAGR	3	TELSPRPGAAGR3	27122.8	26601.6	27867.3
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	TELSQSDMFDQR	TELSQSDMFDQR	2	TELSQSDMFDQR2	151419	173845	153694
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	TELSQSDMFDQR	TELSQSDMFDQR	3	TELSQSDMFDQR3	4664.5	8260.13	6148.14
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	TELTAATGER	TELTAATGER	2	TELTAATGER2	4540.26	1334.92	
P01048	P01048	KNT1_RAT	Map1	T-kininogen 1	1	TELTADCETK	TELTADC(UniMod:4)ETK	2	TELTADC(UniMod:4)ETK2	408197	376158	366646
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	TELTPEER	TELTPEER	2	TELTPEER2	231222	242255	231310
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	TELTVLEPDPR	TELTVLEPDPR	2	TELTVLEPDPR2	4718.61	4551.35	4745.11
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	TELVAISSSEDEGSLR	TELVAISSSEDEGSLR	2	TELVAISSSEDEGSLR2	25143.3	21314.6	18145.2
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	TELVGPAHLIHEFVEYR	TELVGPAHLIHEFVEYR	3	TELVGPAHLIHEFVEYR3	9550.68	10936	7167.5
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	TELVGPAHLIHEFVEYR	TELVGPAHLIHEFVEYR	4	TELVGPAHLIHEFVEYR4	6208.21		2117.15
Q794E4	Q794E4;A0A8I5ZW75	HNRPF_RAT	Hnrnpf	Heterogeneous nuclear ribonucleoprotein F	0	TEMDWVLK	TEMDWVLK	2	TEMDWVLK2	49254.6	41889.6	43399.2
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	TEMEDLMSSK	TEMEDLMSSK	2	TEMEDLMSSK2	1.57877e+07	1.81208e+07	1.88219e+07
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	TEMEDLMSSKDDVGK	TEMEDLMSSKDDVGK	2	TEMEDLMSSKDDVGK2	1012.8	3060.89	
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	TEMEDLMSSKDDVGK	TEMEDLMSSKDDVGK	3	TEMEDLMSSKDDVGK3	36738.5	42469.5	39449.7
F1LR42	F1LR42	F1LR42_RAT	Rufy1	RUN and FYVE domain containing 1	1	TEMEIAMK	TEMEIAMK	2	TEMEIAMK2	16780.2	13762.6	11667.6
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	TEMEMGLR	TEMEMGLR	2	TEMEMGLR2	275903	220951	215223
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	TEMEMGLRK	TEMEMGLRK	2	TEMEMGLRK2		7362.27	
O35094	O35094	TIM44_RAT	Timm44	Mitochondrial import inner membrane translocase subunit TIM44	1	TEMSEVLTEILR	TEMSEVLTEILR	2	TEMSEVLTEILR2	13082.1	5798.6	6569.05
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	TEMSIDLK	TEMSIDLK	2	TEMSIDLK2	49437.8	61337.5	46260.8
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	TEMTEHAVK	TEMTEHAVK	2	TEMTEHAVK2	1.13507e+06	1.10516e+06	1.16445e+06
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	TEMTEHAVKR	TEMTEHAVKR	2	TEMTEHAVKR2			80210.8
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	TEMTEHAVKR	TEMTEHAVKR	3	TEMTEHAVKR3			367158
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	TEMVTISDASQR	TEMVTISDASQR	2	TEMVTISDASQR2	14639.9	17034.7	18763.8
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	TENAVSR	TENAVSR	2	TENAVSR2			8758.33
D4ACC1	D4ACC1	D4ACC1_RAT	Dapp1	Dual adaptor of phosphotyrosine and 3-phosphoinositides 1	1	TENDLVPTAPSLGTK	TENDLVPTAPSLGTK	2	TENDLVPTAPSLGTK2	50490.7	40133	52123.4
Q91XS8	Q91XS8	ST17B_RAT	Stk17b	Serine/threonine-protein kinase 17B	1	TENFNNFYTLTPK	TENFNNFYTLTPK	2	TENFNNFYTLTPK2	3639.25	6018.99	8881.06
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	TENGGWTVIQNR	TENGGWTVIQNR	2	TENGGWTVIQNR2	1.66465e+07	1.65052e+07	1.73048e+07
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	TENGGWTVIQNR	TENGGWTVIQNR	3	TENGGWTVIQNR3	670991	651339	795332
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	TENGGWTVIQNRQDGSVDFGRK	TENGGWTVIQNRQDGSVDFGRK	4	TENGGWTVIQNRQDGSVDFGRK4	6052.19	8080.17	5999.86
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	TENGLKQLSFSLSAEPIQGPYK	TENGLKQLSFSLSAEPIQGPYK	3	TENGLKQLSFSLSAEPIQGPYK3	219116	189040	166534
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	TENGLKQLSFSLSAEPIQGPYK	TENGLKQLSFSLSAEPIQGPYK	4	TENGLKQLSFSLSAEPIQGPYK4	15733	13323.9	7453.53
P14046	A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	TENGLKQLSFSLSAEPIQGPYKIVILK	TENGLKQLSFSLSAEPIQGPYKIVILK	4	TENGLKQLSFSLSAEPIQGPYKIVILK4	27954.2	28464.8	19729.7
Q6F596	Q6F596	GGPPS_RAT	Ggps1	Geranylgeranyl pyrophosphate synthase	1	TENIDIK	TENIDIK	2	TENIDIK2	11029.1	5602.77	3642.42
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	TENLDDEEK	TENLDDEEK	2	TENLDDEEK2	110522	104936	85027.2
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	TENLGRK	TENLGRK	2	TENLGRK2			33199.8
Q63797	Q63797	PSME1_RAT	Psme1	Proteasome activator complex subunit 1	1	TENLLGSYFPK	TENLLGSYFPK	2	TENLLGSYFPK2	114161	101787	91251
Q9JHW5	Q9JHW5	VAMP7_RAT	Vamp7	Vesicle-associated membrane protein 7	1	TENLVDSSVTFK	TENLVDSSVTFK	2	TENLVDSSVTFK2	106630	89382	113388
P61959	F1LN30;P61959;D4A7L5	SUMO2_RAT	Sumo2	Small ubiquitin-related modifier 2	0	TENNDHINLK	TENNDHINLK	2	TENNDHINLK2	3993.04	1416.68	3651.43
P61959	F1LN30;P61959;D4A7L5	SUMO2_RAT	Sumo2	Small ubiquitin-related modifier 2	0	TENNDHINLK	TENNDHINLK	3	TENNDHINLK3	24259.8	14549.6	15751.7
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	TENPLVLIDEVDK	TENPLVLIDEVDK	2	TENPLVLIDEVDK2	48664.1	35562.7	41014.4
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TENSLNQPSR	TENSLNQPSR	2	TENSLNQPSR2	2516.98	799606	15236.4
P08661	P08661;Q7TMC0	MBL2_RAT	Mbl2	Mannose-binding protein C	0	TENVFEDLTGNR	TENVFEDLTGNR	2	TENVFEDLTGNR2	146786	117371	136071
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	TENYEEQFEMFK	TENYEEQFEMFK	2	TENYEEQFEMFK2	978270	719144	738007
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	TENYEEQFEMFK	TENYEEQFEMFK	3	TENYEEQFEMFK3	20354	17934.9	13028
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	TEPATGFIDGDLIESFLDISRPK	TEPATGFIDGDLIESFLDISRPK	3	TEPATGFIDGDLIESFLDISRPK3	18910.8	17604.7	20009.2
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	TEPEANSDDVIR	TEPEANSDDVIR	2	TEPEANSDDVIR2	158479	135537	147131
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	TEPEANSDDVIR	TEPEANSDDVIR	3	TEPEANSDDVIR3	57288.5	78748.3	42072.4
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	TEPGVPVSLVNPQPSSGHFSTK	TEPGVPVSLVNPQPSSGHFSTK	3	TEPGVPVSLVNPQPSSGHFSTK3	36863.7	28953.1	40694.1
D3ZYF5	D3ZYF5	D3ZYF5_RAT	Trim58	Tripartite motif-containing 58	1	TEPLQEAASR	TEPLQEAASR	2	TEPLQEAASR2	83846.2	72295.8	65581.5
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	TEPPLNASAGDQEEK	TEPPLNASAGDQEEK	2	TEPPLNASAGDQEEK2	108440	146985	144943
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	TEPTAQQNLALQLAEK	TEPTAQQNLALQLAEK	2	TEPTAQQNLALQLAEK2	152706	153149	169280
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	TEPTAQQNLALQLAEK	TEPTAQQNLALQLAEK	3	TEPTAQQNLALQLAEK3	24014.8	32059.7	31709
D4A264	D4A264	D4A264_RAT	Ptgr3	Zinc binding alcohol dehydrogenase, domain containing 2	1	TEPVETVLK	TEPVETVLK	2	TEPVETVLK2	23688.8	27292.5	28007.7
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	TEPVLESSLQR	TEPVLESSLQR	2	TEPVLESSLQR2	22640.4	16004.9	18012.5
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	TEPVQELPTHVPK	TEPVQELPTHVPK	2	TEPVQELPTHVPK2	87394.8	71256.1	80353.2
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	TEPVQELPTHVPK	TEPVQELPTHVPK	3	TEPVQELPTHVPK3	377870	350865	312331
D3ZV40	D3ZV40	D3ZV40_RAT	Unk	Unk zinc finger	1	TEQCPLFVQHK	TEQC(UniMod:4)PLFVQHK	3	TEQC(UniMod:4)PLFVQHK3		5881.39	7242.25
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	TEQDLALGTDAEGQR	TEQDLALGTDAEGQR	2	TEQDLALGTDAEGQR2	13644.2	10677.6	8384.83
P14270	P14270	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	1	TEQEDVLAK	TEQEDVLAK	2	TEQEDVLAK2	51470.6	58433.7	50473.6
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	TEQFEVSVNVAPGSK	TEQFEVSVNVAPGSK	2	TEQFEVSVNVAPGSK2	400875	382080	371246
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	TEQFEVSVNVAPGSK	TEQFEVSVNVAPGSK	3	TEQFEVSVNVAPGSK3	74365.3	66984.4	60706.8
P04182	P04182	OAT_RAT	Oat	Ornithine aminotransferase, mitochondrial	1	TEQGPPSSEYIFER	TEQGPPSSEYIFER	2	TEQGPPSSEYIFER2	5665.39	6774.79	3914.94
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	TEQGPQVDETQFK	TEQGPQVDETQFK	2	TEQGPQVDETQFK2	147747	116780	139285
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	TEQGPQVDETQFKK	TEQGPQVDETQFKK	2	TEQGPQVDETQFKK2	2809.36	3455.33	275.027
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	TEQGPQVDETQFKK	TEQGPQVDETQFKK	3	TEQGPQVDETQFKK3	43577.6	41193	64795
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	TEQLIAQTK	TEQLIAQTK	2	TEQLIAQTK2	10868	10412.2	6636.96
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	TEQLSAAR	TEQLSAAR	2	TEQLSAAR2	148896	203586	146986
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	TEQSVALLEQK	TEQSVALLEQK	2	TEQSVALLEQK2	37904.7	44962.3	34863.4
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	TEQVIMFLK	TEQVIMFLK	2	TEQVIMFLK2	17559.7	19914.1	22633.1
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	TEQWYGTQYK	TEQWYGTQYK	2	TEQWYGTQYK2	4120.28	2204.39	5109.3
Q03555	Q03555	GEPH_RAT	Gphn	Gephyrin	1	TEQYVELHK	TEQYVELHK	3	TEQYVELHK3	3838.03	3911.72	3149.29
O35783	O35783	CALU_RAT	Calu	Calumenin	1	TEREQFVEFR	TEREQFVEFR	2	TEREQFVEFR2	26111.6	32697.3	18685.6
O35783	O35783	CALU_RAT	Calu	Calumenin	1	TEREQFVEFR	TEREQFVEFR	3	TEREQFVEFR3	511128	742978	798772
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	TESAQGSQVPGSSGSTR	TESAQGSQVPGSSGSTR	2	TESAQGSQVPGSSGSTR2	15243.5	15070.4	8709.49
D4A7H1	D4A7H1	SL9A9_RAT	Slc9a9	Sodium/hydrogen exchanger 9	1	TESAQLFR	TESAQLFR	2	TESAQLFR2	65782.3	76889.9	82568.9
Q925Q9	Q925Q9	SH3K1_RAT	Sh3kbp1	SH3 domain-containing kinase-binding protein 1	1	TESAVSSQAAIEELK	TESAVSSQAAIEELK	2	TESAVSSQAAIEELK2	9445.5	15098.8	12260.5
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	TESCLVSGMQVLLALLEPR	TESC(UniMod:4)LVSGMQVLLALLEPR	3	TESC(UniMod:4)LVSGMQVLLALLEPR3		1511.55	
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	TESFEVTLDPLSLEK	TESFEVTLDPLSLEK	2	TESFEVTLDPLSLEK2	65582	74555.3	76266.7
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	TESFEVTLDPLSLEK	TESFEVTLDPLSLEK	3	TESFEVTLDPLSLEK3	17451.8	16258.7	18316.6
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	TESFEVTLDPLSLEKK	TESFEVTLDPLSLEKK	3	TESFEVTLDPLSLEKK3	8780.12	6016.89	10252.2
G3V674	G3V674	G3V674_RAT	Cldnd1	Claudin domain containing 1	1	TESFEVVTK	TESFEVVTK	2	TESFEVVTK2		11293.3	11583
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	TESGYGSESSLR	TESGYGSESSLR	2	TESGYGSESSLR2	21694	22402.6	22613.6
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	TESGYGSESSLRR	TESGYGSESSLRR	3	TESGYGSESSLRR3	27028.7	42353.8	26905.2
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	TESHEQTFR	TESHEQTFR	2	TESHEQTFR2	185826		219639
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	TESHEQTFRVEK	TESHEQTFRVEK	2	TESHEQTFRVEK2	2542.59	5452.38	4561.15
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	TESHEQTFRVEK	TESHEQTFRVEK	3	TESHEQTFRVEK3	68043.8	120124	129936
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	TESIDKR	TESIDKR	2	TESIDKR2			11192
D4A6U4	D4A6U4	D4A6U4_RAT	Tecpr2	Tectonin beta-propeller repeat containing 2	1	TESITVVK	TESITVVK	2	TESITVVK2	6826.95		1945.45
P50170;P55006	A0A8I5ZNX6;P50170;P55006	RDH16_RAT;RDH7_RAT	Rdh16;Rdh7	Retinol dehydrogenase 16	0	TESIVAATQWVK	TESIVAATQWVK	2	TESIVAATQWVK2	4198.22	2101.91	1507.5
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	TESPDVSHQPR	TESPDVSHQPR	2	TESPDVSHQPR2	25651.4		22876.4
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	TESPDVSHQPR	TESPDVSHQPR	3	TESPDVSHQPR3	36641.5		54412.7
B3DMA2	B3DMA2	ACD11_RAT	Acad11	Acyl-CoA dehydrogenase family member 11	1	TESPSVSR	TESPSVSR	2	TESPSVSR2	29274.9		49959
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	TESPVLTNSCR	TESPVLTNSC(UniMod:4)R	2	TESPVLTNSC(UniMod:4)R2	9503.21	12752	9550.62
Q6PCU8	Q6PCU8	NDUV3_RAT	Ndufv3	NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial	1	TESVFKEPTLVPESSDTTTYK	TESVFKEPTLVPESSDTTTYK	3	TESVFKEPTLVPESSDTTTYK3	20373.1	24802.9	27077.1
A0A8J8XL70	A0A8J8XL70	A0A8J8XL70_RAT	Serpinf1	Serpin family F member 1	1	TESVIHR	TESVIHR	2	TESVIHR2	125006	95417.1	85715.5
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	TESVPSDINNPVDR	TESVPSDINNPVDR	2	TESVPSDINNPVDR2	36490.7	23677.4	38336.2
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	TESWFSR	TESWFSR	2	TESWFSR2	36683.2	31198.8	34484.1
F7FLA1	F7FLA1	F7FLA1_RAT	Slc35b2	Solute carrier family 35 member B2	1	TETAESTPSWQVLK	TETAESTPSWQVLK	2	TETAESTPSWQVLK2	5928.04	7159.03	2357.86
F1M1L9	F1M1L9	F1M1L9_RAT	Cpne2	Copine 2	1	TETAINNLNPAFSK	TETAINNLNPAFSK	2	TETAINNLNPAFSK2	4698.89	1036.69	
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	TETAVFK	TETAVFK	1	TETAVFK1	617.06	4988.71	1691.56
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	TETAVFK	TETAVFK	2	TETAVFK2	216571	317566	169476
Q9WUD9	Q9WUD9	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	1	TETDLSFK	TETDLSFK	2	TETDLSFK2	215320	197038	221358
Q9WUD9	Q9WUD9	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	1	TETDLSFKK	TETDLSFKK	2	TETDLSFKK2	25477.7	34766.6	27071.4
Q4FZV0	Q4FZV0	MANBA_RAT	Manba	Beta-mannosidase	1	TETEFYLR	TETEFYLR	2	TETEFYLR2	20206.8	26686.6	32403.7
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	TETEPVFWVYVK	TETEPVFWVYVK	2	TETEPVFWVYVK2	6093.63	22159.6	20599.5
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	TETETTGEEQPSFSEVQQQLCNTK	TETETTGEEQPSFSEVQQQLC(UniMod:4)NTK	3	TETETTGEEQPSFSEVQQQLC(UniMod:4)NTK3	1990.1	2630.72	3378.55
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	TETFCPMK	TETFC(UniMod:4)PMK	2	TETFC(UniMod:4)PMK2	1.74822e+06	1.83211e+06	1.87971e+06
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	TETGQELECLQDHLDDLAVECR	TETGQELEC(UniMod:4)LQDHLDDLAVEC(UniMod:4)R	3	TETGQELEC(UniMod:4)LQDHLDDLAVEC(UniMod:4)R3	20319.2	9365.52	21234.1
Q9JMB3	Q9JMB3	Q9JMB3_RAT	Epb41l3	Erythrocyte membrane protein band 4.1-like 3	1	TETIETEVEPTPHPQPLSTEK	TETIETEVEPTPHPQPLSTEK	3	TETIETEVEPTPHPQPLSTEK3	4823.26	3881.38	4451.81
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	TETIRPASIFTK	TETIRPASIFTK	3	TETIRPASIFTK3	132822	131514	118549
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TETITGFQVDAIPANGQTPVQR	TETITGFQVDAIPANGQTPVQR	3	TETITGFQVDAIPANGQTPVQR3	78232.6	81565.9	81236.6
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TETITGFQVDAIPANGQTPVQR	TETITGFQVDAIPANGQTPVQR	4	TETITGFQVDAIPANGQTPVQR4	26944.2	36670.4	26206.8
B0K017	B0K017	B0K017_RAT	Adprs	ADP-ribosylserine hydrolase	1	TETLYYTDDTAMTR	TETLYYTDDTAMTR	2	TETLYYTDDTAMTR2	3674.86	6302.34	5341.25
A0A8I6GM11	A0A8I6GM11	A0A8I6GM11_RAT	Lsm12	LSM12 homolog	1	TETPPPLASLNVSK	TETPPPLASLNVSK	2	TETPPPLASLNVSK2	26137	20235.9	10282.1
P62329	P62329	TYB4_RAT	Tmsb4x	Thymosin beta-4	1	TETQEKNPLPSK	TETQEKNPLPSK	2	TETQEKNPLPSK2	142393	168969	112332
P62329	P62329	TYB4_RAT	Tmsb4x	Thymosin beta-4	1	TETQEKNPLPSK	TETQEKNPLPSK	3	TETQEKNPLPSK3	2.54706e+06	3.47193e+06	2.70007e+06
P62329	P62329	TYB4_RAT	Tmsb4x	Thymosin beta-4	1	TETQEKNPLPSKETIEQEK	TETQEKNPLPSKETIEQEK	3	TETQEKNPLPSKETIEQEK3	43366.9	63560.7	59386
P62329	P62329	TYB4_RAT	Tmsb4x	Thymosin beta-4	1	TETQEKNPLPSKETIEQEK	TETQEKNPLPSKETIEQEK	4	TETQEKNPLPSKETIEQEK4	248251	393518	413886
A0A0G2K1L5	A0A0G2K1L5	A0A0G2K1L5_RAT	Reep2	Receptor expression-enhancing protein	1	TETSEDDLGDK	TETSEDDLGDK	2	TETSEDDLGDK2	50371.1	40193.7	36765.2
A0A0G2K1L5	A0A0G2K1L5	A0A0G2K1L5_RAT	Reep2	Receptor expression-enhancing protein	1	TETSEDDLGDKAPK	TETSEDDLGDKAPK	2	TETSEDDLGDKAPK2	14893.1	13753.7	9958.49
A0A0G2K1L5	A0A0G2K1L5	A0A0G2K1L5_RAT	Reep2	Receptor expression-enhancing protein	1	TETSEDDLGDKAPK	TETSEDDLGDKAPK	3	TETSEDDLGDKAPK3	129077	187134	191738
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	TETSHHLSLDR	TETSHHLSLDR	3	TETSHHLSLDR3	46033.5	64297.9	54070.3
P55053	P55053	FABP5_RAT	Fabp5	Fatty acid-binding protein 5	1	TETVCTFTDGALVQHQK	TETVC(UniMod:4)TFTDGALVQHQK	2	TETVC(UniMod:4)TFTDGALVQHQK2	2995.87	3536.18	2606.41
P55053	P55053	FABP5_RAT	Fabp5	Fatty acid-binding protein 5	1	TETVCTFTDGALVQHQK	TETVC(UniMod:4)TFTDGALVQHQK	3	TETVC(UniMod:4)TFTDGALVQHQK3	32324.5	36913.6	40215.6
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	TETVEEPLEEDETAQEEK	TETVEEPLEEDETAQEEK	3	TETVEEPLEEDETAQEEK3	12865.9	14575.8	16318.1
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	TEVAAGDHPTDAEMK	TEVAAGDHPTDAEMK	2	TEVAAGDHPTDAEMK2		1213.52	3501.73
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	TEVAAGDHPTDAEMK	TEVAAGDHPTDAEMK	3	TEVAAGDHPTDAEMK3	40638.4	40722.8	46481.6
P24062	P24062	IGF1R_RAT	Igf1r	Insulin-like growth factor 1 receptor	1	TEVCGGDKGPCCACPK	TEVC(UniMod:4)GGDKGPC(UniMod:4)C(UniMod:4)AC(UniMod:4)PK	3	TEVC(UniMod:4)GGDKGPC(UniMod:4)C(UniMod:4)AC(UniMod:4)PK3	3359.81	5315.82	
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	TEVEITVSQPTSTIIMHSHQLQISK	TEVEITVSQPTSTIIMHSHQLQISK	4	TEVEITVSQPTSTIIMHSHQLQISK4	11473.6	11848.4	9933.04
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	TEVEYFHR	TEVEYFHR	2	TEVEYFHR2	6098.91	5150.67	11823.4
Q05028	Q05028	PDGFB_RAT	Pdgfb	Platelet-derived growth factor subunit B (Fragment)	1	TEVFQISR	TEVFQISR	2	TEVFQISR2	49895.6	35421.2	38130.1
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	TEVGDNWR	TEVGDNWR	2	TEVGDNWR2	65505.5	61207.1	65445
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	TEVGGSAVPDTK	TEVGGSAVPDTK	2	TEVGGSAVPDTK2	111534	123140	116132
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	TEVGGTGLSQAEVR	TEVGGTGLSQAEVR	2	TEVGGTGLSQAEVR2	26816.9	33850.9	33728.6
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	TEVGQEGEVDWLDGEK	TEVGQEGEVDWLDGEK	2	TEVGQEGEVDWLDGEK2	13553.7	8945.57	12752
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	TEVGSQLR	TEVGSQLR	2	TEVGSQLR2	540537	519912	500910
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	TEVHVEPHKK	TEVHVEPHKK	3	TEVHVEPHKK3			20852.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TEVIPPLIENR	TEVIPPLIENR	2	TEVIPPLIENR2	5.76485e+06	6.55071e+06	6.87863e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TEVIPPLIENR	TEVIPPLIENR	3	TEVIPPLIENR3	29559.6	35929.1	31425.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TEVIPPLIENRK	TEVIPPLIENRK	2	TEVIPPLIENRK2	102612	156539	149384
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TEVIPPLIENRK	TEVIPPLIENRK	3	TEVIPPLIENRK3	1.30941e+06	2.06986e+06	1.79933e+06
P60123	A0A0G2K0H9;P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	0	TEVLMENFR	TEVLMENFR	2	TEVLMENFR2	83086.7	104376	103737
Q99N37	Q99N37	RHG17_RAT	Arhgap17	Rho GTPase-activating protein 17	1	TEVLSEDLLQIER	TEVLSEDLLQIER	2	TEVLSEDLLQIER2	10572.3	27611.7	15661.2
M0RD40	M0RD40	M0RD40_RAT	Sik3	non-specific serine/threonine protein kinase	1	TEVMDEMQK	TEVMDEMQK	2	TEVMDEMQK2	18578.1	17626.4	9270.39
Q9ES71	Q9ES71	GNPAT_RAT	Gnpat	Dihydroxyacetone phosphate acyltransferase	1	TEVMQMTGK	TEVMQMTGK	2	TEVMQMTGK2	13900	15499.7	9174.36
F7ELS2	F7ELS2	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	1	TEVNSGFFYK	TEVNSGFFYK	2	TEVNSGFFYK2	138894	141319	158646
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	TEVNTNHVLIYIEK	TEVNTNHVLIYIEK	2	TEVNTNHVLIYIEK2	11029.9	10573.6	253941
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	TEVNTNHVLIYIEK	TEVNTNHVLIYIEK	3	TEVNTNHVLIYIEK3	84367.9	80462.7	1.32698e+06
E9PU42	E9PU42	E9PU42_RAT	Vps26c	VPS26 endosomal protein sorting factor C	1	TEVPFEFPLLVK	TEVPFEFPLLVK	2	TEVPFEFPLLVK2	5269.59	5054.58	4513.95
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	TEVPPLLLILDR	TEVPPLLLILDR	2	TEVPPLLLILDR2	8896.17	7504.08	8342.78
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	TEVQVFK	TEVQVFK	2	TEVQVFK2	22515.6	18175.2	36687.4
D3ZUQ1	D3ZUQ1	D3ZUQ1_RAT	Lipo1	Lipase	1	TEVSDEILTILGEYDSSV	TEVSDEILTILGEYDSSV	3	TEVSDEILTILGEYDSSV3		11643.5	
A0A0G2JVT8	A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	1	TEVSDYGR	TEVSDYGR	2	TEVSDYGR2	12273.5	13595.3	7340.64
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	TEVSLTLTNK	TEVSLTLTNK	2	TEVSLTLTNK2	41065.2	31322.7	40111.3
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	TEVSNNHVLIYLDK	TEVSNNHVLIYLDK	3	TEVSNNHVLIYLDK3	21647.6	14075.4	8887.84
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	TEVVDSDGSIK	TEVVDSDGSIK	2	TEVVDSDGSIK2	6867.85	10224.3	
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	TEVVDSDGSIKDK	TEVVDSDGSIKDK	2	TEVVDSDGSIKDK2	11559.2	6581.79	10897.9
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	TEVVDSDGSIKDK	TEVVDSDGSIKDK	3	TEVVDSDGSIKDK3	46775.5	55108.2	54531.5
A0A8I6AAR9	A0A8I6AAR9	A0A8I6AAR9_RAT	Ankrd17	Ankyrin repeat domain 17	1	TEVVSLLLDR	TEVVSLLLDR	2	TEVVSLLLDR2	4783.52	2098.43	2066.11
P10111	P10111;A0A8I6A629	PPIA_RAT	Ppia	Peptidyl-prolyl cis-trans isomerase A	0	TEWLDGK	TEWLDGK	1	TEWLDGK1	18896.2	22906.7	23218.2
P10111	P10111;A0A8I6A629	PPIA_RAT	Ppia	Peptidyl-prolyl cis-trans isomerase A	0	TEWLDGK	TEWLDGK	2	TEWLDGK2	1.57204e+06	1.62117e+06	1.71615e+06
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	TEYAEFLHCK	TEYAEFLHC(UniMod:4)K	2	TEYAEFLHC(UniMod:4)K2	34571.9	25532	31245.7
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	TEYAEFLHCK	TEYAEFLHC(UniMod:4)K	3	TEYAEFLHC(UniMod:4)K3	58950.2	104679	112720
Q5Y4N8	Q5Y4N8	AGRE1_RAT	Adgre1	Adhesion G protein-coupled receptor E2	1	TEYLEIESK	TEYLEIESK	2	TEYLEIESK2	9869.4	8715.32	10829.6
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TEYLSNADER	TEYLSNADER	2	TEYLSNADER2	242375	239560	211461
P15684	P15684	AMPN_RAT	Anpep	Aminopeptidase N	1	TEYLVVHLQGSLVK	TEYLVVHLQGSLVK	3	TEYLVVHLQGSLVK3	1899.56		1528.7
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	TEYPLHK	TEYPLHK	2	TEYPLHK2	20927.8	13288.1	17387.9
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	TFAADHNYLQQLPPEIGNWK	TFAADHNYLQQLPPEIGNWK	3	TFAADHNYLQQLPPEIGNWK3	483215	483393	530794
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	TFAFTGPNR	TFAFTGPNR	2	TFAFTGPNR2	71520.5	58108.9	61684.7
A0A0G2JUT7	A0A0G2JUT7	A0A0G2JUT7_RAT	B3glct	Beta 3-glucosyltransferase	1	TFAILER	TFAILER	2	TFAILER2	4028.56	4058.2	9003.15
D3ZYR1	D3ZYR1	FCHO2_RAT	Fcho2	F-BAR domain only protein 2	1	TFALPGIIK	TFALPGIIK	2	TFALPGIIK2	61782.4	75735.3	72761.1
D4A435	D4A435	D4A435_RAT	Icam5	Intercellular adhesion molecule 5	1	TFAMPPLSPSLIAPR	TFAMPPLSPSLIAPR	2	TFAMPPLSPSLIAPR2			9817.46
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	TFAPDLK	TFAPDLK	1	TFAPDLK1	46978.8	46896.3	34145.9
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	TFAPDLK	TFAPDLK	2	TFAPDLK2	1.39106e+06	1.334e+06	1.50045e+06
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	TFAPEEISAMVLTK	TFAPEEISAMVLTK	2	TFAPEEISAMVLTK2	3.30797e+06	3.05108e+06	3.14052e+06
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	TFAPEEISAMVLTK	TFAPEEISAMVLTK	3	TFAPEEISAMVLTK3	600334	575522	586680
Q642B0	Q642B0	Q642B0_RAT	Gpc4	Glypican 4	1	TFAQGLAVAR	TFAQGLAVAR	2	TFAQGLAVAR2	84579.8	90922.7	87402.3
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	TFAVDETSVSGYIYHK	TFAVDETSVSGYIYHK	2	TFAVDETSVSGYIYHK2	3708.1	1700.94	
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	TFAVDETSVSGYIYHK	TFAVDETSVSGYIYHK	3	TFAVDETSVSGYIYHK3	8961.96	9116.61	15046.5
Q56AP7	Q56AP7	CRBN_RAT	Crbn	Protein cereblon	1	TFAVLAYSNVQER	TFAVLAYSNVQER	2	TFAVLAYSNVQER2	6799.72	4869.02	7069.52
P86182	P86182	CCD22_RAT	Ccdc22	Coiled-coil domain-containing protein 22	1	TFAVTDELVFK	TFAVTDELVFK	2	TFAVTDELVFK2	8097	6563.01	4994.26
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	TFAWGYADLSCR	TFAWGYADLSC(UniMod:4)R	2	TFAWGYADLSC(UniMod:4)R2	4524.46	816.283	1301.5
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	TFAYTNHTVLPEALER	TFAYTNHTVLPEALER	2	TFAYTNHTVLPEALER2	7193.52	6050.33	2921.32
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	TFAYTNHTVLPEALER	TFAYTNHTVLPEALER	3	TFAYTNHTVLPEALER3	162502	152589	188885
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	TFCFANSGQALYLVSPTEIQR	TFC(UniMod:4)FANSGQALYLVSPTEIQR	3	TFC(UniMod:4)FANSGQALYLVSPTEIQR3	37729.2		26407.4
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	TFCFDYDMVPLAVPAAR	TFC(UniMod:4)FDYDMVPLAVPAAR	3	TFC(UniMod:4)FDYDMVPLAVPAAR3	125739	29337.3	82994.8
P05696	P68403;P05696;P63319	KPCA_RAT	Prkca	Protein kinase C alpha type	0	TFCGTPDYIAPEIIAYQPYGK	TFC(UniMod:4)GTPDYIAPEIIAYQPYGK	3	TFC(UniMod:4)GTPDYIAPEIIAYQPYGK3	31910.9	27638.6	22312.6
Q63484	P47196;P47197;Q63484	AKT3_RAT	Akt3	RAC-gamma serine/threonine-protein kinase	0	TFCGTPEYLAPEVLEDNDYGR	TFC(UniMod:4)GTPEYLAPEVLEDNDYGR	3	TFC(UniMod:4)GTPEYLAPEVLEDNDYGR3	1959.87		1610.33
Q9QWJ9	Q9QWJ9	NRP1_RAT	Nrp1	Neuropilin-1	1	TFCHWEHDSHAQLR	TFC(UniMod:4)HWEHDSHAQLR	4	TFC(UniMod:4)HWEHDSHAQLR4	5928.14	12979.1	6221.16
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	TFCNCFVSQAGQK	TFC(UniMod:4)NC(UniMod:4)FVSQAGQK	2	TFC(UniMod:4)NC(UniMod:4)FVSQAGQK2	2492.81	2048.84	2094.29
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	TFCPEHK	TFC(UniMod:4)PEHK	2	TFC(UniMod:4)PEHK2	26622.1	21470.2	16036.8
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	TFCQLILDPIFK	TFC(UniMod:4)QLILDPIFK	2	TFC(UniMod:4)QLILDPIFK2	35092.3	54117.6	38449.8
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	TFCSEPEK	TFC(UniMod:4)SEPEK	2	TFC(UniMod:4)SEPEK2	1.55066e+06	1.12197e+06	905003
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	TFCSEPEKVDK	TFC(UniMod:4)SEPEKVDK	3	TFC(UniMod:4)SEPEKVDK3	38685.5	17286.9	14267.4
E9PU37	E9PU37	E9PU37_RAT	Zdhhc13	Palmitoyltransferase	1	TFCTSCLIR	TFC(UniMod:4)TSC(UniMod:4)LIR	2	TFC(UniMod:4)TSC(UniMod:4)LIR2	23386.4	29698.9	22147.5
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	TFDAIVMDPK	TFDAIVMDPK	2	TFDAIVMDPK2	1.34049e+06	1.46741e+06	1.56215e+06
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	TFDAIVMDPKK	TFDAIVMDPKK	2	TFDAIVMDPKK2	1605.24	1991.23	5366.83
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	TFDAIVMDPKK	TFDAIVMDPKK	3	TFDAIVMDPKK3	1972.87	14232	14688.3
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	TFDAQIVIIEHK	TFDAQIVIIEHK	2	TFDAQIVIIEHK2	4969.07	4622.94	4954.74
Q6AYD5	Q6AYD5	Q6AYD5_RAT	Gspt1	G1 to S phase transition 1	1	TFDAQIVIIEHK	TFDAQIVIIEHK	3	TFDAQIVIIEHK3	35524.5	37032.3	31939.3
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	TFDATNPLNLCVK	TFDATNPLNLC(UniMod:4)VK	2	TFDATNPLNLC(UniMod:4)VK2	5787.07	2164.62	6816.29
G3V7N0	G3V7N0	G3V7N0_RAT	Hs2st1	Heparan sulfate 2-O-sulfotransferase 1	1	TFDECVAEGGSDCAPEK	TFDEC(UniMod:4)VAEGGSDC(UniMod:4)APEK	2	TFDEC(UniMod:4)VAEGGSDC(UniMod:4)APEK2		4870.04	4184.95
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	TFDEWKDMIPDLSDYK	TFDEWKDMIPDLSDYK	3	TFDEWKDMIPDLSDYK3	8338.16	4432.65	5453.51
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TFDHYCEYR	TFDHYC(UniMod:4)EYR	2	TFDHYC(UniMod:4)EYR2	12317.3	20921.8	18053.4
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TFDHYCEYR	TFDHYC(UniMod:4)EYR	3	TFDHYC(UniMod:4)EYR3	163427	218525	180998
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TFDHYCEYRR	TFDHYC(UniMod:4)EYRR	3	TFDHYC(UniMod:4)EYRR3	6912.06	6082.78	
A0A8I5ZQA7	A0A8I5ZQA7	A0A8I5ZQA7_RAT	Serpinb6b	Serine (or cysteine) peptidase inhibitor, clade B, member 6b	1	TFDILASFK	TFDILASFK	2	TFDILASFK2	9041.98	7294.89	8141.26
Q00238	Q00238	ICAM1_RAT	Icam1	Intercellular adhesion molecule 1	1	TFDLPTR	TFDLPTR	2	TFDLPTR2	21767.5	21358.9	21051.1
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	TFDLTAVSYLR	TFDLTAVSYLR	2	TFDLTAVSYLR2	17134	17118.1	16048.1
D3Z8F6	D3Z8F6	D3Z8F6_RAT	Dennd1b	DENN domain containing 1B	1	TFDLVLK	TFDLVLK	2	TFDLVLK2	18482.8	13898.3	17724.2
Q99NA5	Q99NA5	IDH3A_RAT	Idh3a	Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial	1	TFDLYANVRPCVSIEGYK	TFDLYANVRPC(UniMod:4)VSIEGYK	3	TFDLYANVRPC(UniMod:4)VSIEGYK3	123111	115051	112532
A0A0G2K3Y6	A0A0G2K3Y6	A0A0G2K3Y6_RAT	Cpeb4	Cytoplasmic polyadenylation element binding protein 4	1	TFDMHSLESSLIDIMR	TFDMHSLESSLIDIMR	3	TFDMHSLESSLIDIMR3	1317.06	1511.99	
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	TFDPEGVLFFAGGR	TFDPEGVLFFAGGR	2	TFDPEGVLFFAGGR2	75008.3	73228.8	70764
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	TFDPEGVLFFAGGR	TFDPEGVLFFAGGR	3	TFDPEGVLFFAGGR3	2273.96	3612.15	5120.08
P19357	P19357	GLUT4_RAT	Slc2a4	Solute carrier family 2, facilitated glucose transporter member 4	1	TFDQISATFR	TFDQISATFR	2	TFDQISATFR2	32263.9	34990.2	41272.3
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	TFDQLSPDESK	TFDQLSPDESK	2	TFDQLSPDESK2	20080.5	15722.2	16053.8
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	TFDQLSPDESKER	TFDQLSPDESKER	2	TFDQLSPDESKER2	5475.55	6854.84	5812.75
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	TFDQLSPDESKER	TFDQLSPDESKER	3	TFDQLSPDESKER3	80643.2	86033	121948
P16975	P16975	SPRC_RAT	Sparc	SPARC	1	TFDSSCHFFATK	TFDSSC(UniMod:4)HFFATK	2	TFDSSC(UniMod:4)HFFATK2	37744.5	39015.6	31518.1
P16975	P16975	SPRC_RAT	Sparc	SPARC	1	TFDSSCHFFATK	TFDSSC(UniMod:4)HFFATK	3	TFDSSC(UniMod:4)HFFATK3	565212	584353	567835
B2RYW9	B2RYW9	FAHD2_RAT	Fahd2	Fumarylacetoacetate hydrolase domain-containing protein 2	1	TFDTFCPLGPALVTK	TFDTFC(UniMod:4)PLGPALVTK	2	TFDTFC(UniMod:4)PLGPALVTK2	60648.1	42822.5	69779
P62749	P84076;P62749	HPCL1_RAT	Hpcal1	Hippocalcin-like protein 1	0	TFDTNSDGTIDFR	TFDTNSDGTIDFR	2	TFDTNSDGTIDFR2	5872.24	6135.81	4909.57
Q9ERE6	Q9ERE6	MPRIP_RAT	Mprip	Myosin phosphatase Rho-interacting protein	1	TFDWAEFRPIQQALAQER	TFDWAEFRPIQQALAQER	3	TFDWAEFRPIQQALAQER3	4763.56		5579.68
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	TFEDFVR	TFEDFVR	2	TFEDFVR2	14866.8	18610.7	15906.2
Q07647	Q07647	GTR3_RAT	Slc2a3	Solute carrier family 2, facilitated glucose transporter member 3	1	TFEDITR	TFEDITR	2	TFEDITR2	3.15479e+06	3.53905e+06	3.17243e+06
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	TFEEFQELHNK	TFEEFQELHNK	2	TFEEFQELHNK2	2344.94	3810.13	
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	TFEEFQELHNK	TFEEFQELHNK	3	TFEEFQELHNK3	47112.4	34531.9	43179.6
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	TFEGLGQLEVLTLNDNQITEVR	TFEGLGQLEVLTLNDNQITEVR	3	TFEGLGQLEVLTLNDNQITEVR3	114582	123894	131256
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	TFEGVDPK	TFEGVDPK	2	TFEGVDPK2	57343.8	61278.2	70233.5
P50398	P50398	GDIA_RAT	Gdi1	Rab GDP dissociation inhibitor alpha	1	TFEGVDPQTTSMR	TFEGVDPQTTSMR	2	TFEGVDPQTTSMR2	123348	103720	113589
A0A8I5ZM79	A0A8I5ZM79	A0A8I5ZM79_RAT	Psmd7	Proteasome 26S subunit, non-ATPase 7	1	TFEHVTSEIGAEEAEEVGVEHLLR	TFEHVTSEIGAEEAEEVGVEHLLR	3	TFEHVTSEIGAEEAEEVGVEHLLR3	6728.08	5937.02	5622
A0A8I5ZM79	A0A8I5ZM79	A0A8I5ZM79_RAT	Psmd7	Proteasome 26S subunit, non-ATPase 7	1	TFEHVTSEIGAEEAEEVGVEHLLR	TFEHVTSEIGAEEAEEVGVEHLLR	4	TFEHVTSEIGAEEAEEVGVEHLLR4	79355.3	59235.2	69176.4
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	TFEINPR	TFEINPR	2	TFEINPR2	5.29339e+06	6.30035e+06	6.03425e+06
D4ADT5	D4ADT5	D4ADT5_RAT	Rig1	RNA helicase	1	TFEIPVIK	TFEIPVIK	2	TFEIPVIK2	6680.6	6511.83	4149.76
P82450	P82450	SIAE_RAT	Siae	Sialate O-acetylesterase	1	TFEISCCSDHQCK	TFEISC(UniMod:4)C(UniMod:4)SDHQC(UniMod:4)K	3	TFEISC(UniMod:4)C(UniMod:4)SDHQC(UniMod:4)K3	10112.2	14949.7	6839.79
D3ZUM4	D3ZUM4	D3ZUM4_RAT	Glb1	Beta-galactosidase	1	TFELDYK	TFELDYK	2	TFELDYK2	15773.5	12621.8	8881.15
G3V619	G3V619	G3V619_RAT	Ascc1	Activating signal cointegrator 1 complex subunit 1	1	TFENFYFGSLK	TFENFYFGSLK	2	TFENFYFGSLK2	15298.9	10488.4	14842.5
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	TFEPDPR	TFEPDPR	2	TFEPDPR2	16628.9	7688.5	11633.2
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	TFESEAR	TFESEAR	2	TFESEAR2	119860	171807	172693
Q9WVK7	Q9WVK7	HCDH_RAT	Hadh	Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial	1	TFESLVDFCK	TFESLVDFC(UniMod:4)K	2	TFESLVDFC(UniMod:4)K2	10829.7	6820.84	6941.91
Q499N5	Q499N5	ACSF2_RAT	Acsf2	Medium-chain acyl-CoA ligase ACSF2, mitochondrial	1	TFETVGQDR	TFETVGQDR	2	TFETVGQDR2	10867.7	13511.8	4414.55
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	TFEVCDLPVR	TFEVC(UniMod:4)DLPVR	2	TFEVC(UniMod:4)DLPVR2	209914	219200	259701
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	TFFEELAVEDK	TFFEELAVEDK	2	TFFEELAVEDK2	52872.2	63181.5	48388.4
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	TFFENVNLCDHR	TFFENVNLC(UniMod:4)DHR	2	TFFENVNLC(UniMod:4)DHR2	4793.11	1348.72	3189.86
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	TFFENVNLCDHR	TFFENVNLC(UniMod:4)DHR	3	TFFENVNLC(UniMod:4)DHR3	32818.1	31024	22258.1
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	TFFILHDINSDGVLDEQELEALFTK	TFFILHDINSDGVLDEQELEALFTK	3	TFFILHDINSDGVLDEQELEALFTK3	12747.8	13061.7	8144.55
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	TFFPEEISSMVLTK	TFFPEEISSMVLTK	2	TFFPEEISSMVLTK2	68964	95784.1	82280.6
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	TFFPEEISSMVLTK	TFFPEEISSMVLTK	3	TFFPEEISSMVLTK3	23001.6	21215.9	20536.1
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	TFFSFPAVVAPFK	TFFSFPAVVAPFK	2	TFFSFPAVVAPFK2	30426.9	31687.8	34048.5
A0A8I6ATH0	A0A8I6ATH0	A0A8I6ATH0_RAT	Braf	non-specific serine/threonine protein kinase	1	TFFTLAFCDFCR	TFFTLAFC(UniMod:4)DFC(UniMod:4)R	2	TFFTLAFC(UniMod:4)DFC(UniMod:4)R2	3256.46	6485.94	2467.87
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	TFGANEDIDR	TFGANEDIDR	2	TFGANEDIDR2	41217	38718.6	42384.2
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	TFGHLLR	TFGHLLR	2	TFGHLLR2	40483.8	38866.4	34578.9
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	TFGHNTMDAVPR	TFGHNTMDAVPR	2	TFGHNTMDAVPR2	2728.61	1519.19	5957.55
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	TFGHNTMDAVPR	TFGHNTMDAVPR	3	TFGHNTMDAVPR3	37772.1	39224.6	41630.9
P18292	P18292	THRB_RAT	F2	Prothrombin	1	TFGLGEADCGLR	TFGLGEADC(UniMod:4)GLR	2	TFGLGEADC(UniMod:4)GLR2	1.62167e+06	1.31217e+06	1.18585e+06
P18292	P18292	THRB_RAT	F2	Prothrombin	1	TFGLGEADCGLRPLFEK	TFGLGEADC(UniMod:4)GLRPLFEK	2	TFGLGEADC(UniMod:4)GLRPLFEK2	8.81315e+06	9.31417e+06	7.73924e+06
P18292	P18292	THRB_RAT	F2	Prothrombin	1	TFGLGEADCGLRPLFEK	TFGLGEADC(UniMod:4)GLRPLFEK	3	TFGLGEADC(UniMod:4)GLRPLFEK3	3.04492e+06	3.46461e+06	3.04561e+06
P18292	P18292	THRB_RAT	F2	Prothrombin	1	TFGLGEADCGLRPLFEK	TFGLGEADC(UniMod:4)GLRPLFEK	4	TFGLGEADC(UniMod:4)GLRPLFEK4	13958.8	10100.1	20524
P18292	P18292	THRB_RAT	F2	Prothrombin	1	TFGLGEADCGLRPLFEKK	TFGLGEADC(UniMod:4)GLRPLFEKK	3	TFGLGEADC(UniMod:4)GLRPLFEKK3	169360	276919	282194
P18292	P18292	THRB_RAT	F2	Prothrombin	1	TFGLGEADCGLRPLFEKK	TFGLGEADC(UniMod:4)GLRPLFEKK	4	TFGLGEADC(UniMod:4)GLRPLFEKK4	175718	327133	364644
Q66HC5	Q66HC5	NUP93_RAT	Nup93	Nuclear pore complex protein Nup93	1	TFGMAEEYHR	TFGMAEEYHR	3	TFGMAEEYHR3	4791.45	3854.99	3650.33
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	TFGNHTLSK	TFGNHTLSK	2	TFGNHTLSK2	25838.8	18222.4	20820.7
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	TFGTLVSR	TFGTLVSR	2	TFGTLVSR2	38007.1	39905.1	50368.8
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	TFHIFYYLLSGAGEHLK	TFHIFYYLLSGAGEHLK	3	TFHIFYYLLSGAGEHLK3	389553	412693	377417
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	TFHIFYYLLSGAGEHLK	TFHIFYYLLSGAGEHLK	4	TFHIFYYLLSGAGEHLK4	2.04696e+06	1.93851e+06	2.11949e+06
A0A8J8Y8E0	A0A8J8Y8E0	A0A8J8Y8E0_RAT	Fibp	FGF1 intracellular binding protein	1	TFHMLER	TFHMLER	2	TFHMLER2	8805.08	9287.99	4763.3
Q6UPR8	Q6UPR8	ERMP1_RAT	Ermp1	Endoplasmic reticulum metallopeptidase 1	1	TFHNLEGSVVK	TFHNLEGSVVK	3	TFHNLEGSVVK3	18988.5	13097.9	15519
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	TFHNPTYFSR	TFHNPTYFSR	2	TFHNPTYFSR2	10068.2	6577.76	6774.77
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	TFHNPTYFSR	TFHNPTYFSR	3	TFHNPTYFSR3	66277.7	73180.6	85631.8
Q5U1Z8	Q5U1Z8	PREY_RAT	Pyurf	Protein preY, mitochondrial	1	TFHPALLQFLVCPLSK	TFHPALLQFLVC(UniMod:4)PLSK	3	TFHPALLQFLVC(UniMod:4)PLSK3	3877.36	7805.04	5081.26
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	TFHSTNTTWR	TFHSTNTTWR	3	TFHSTNTTWR3	11285.5	5867.81	6348.31
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	TFHTPNLWK	TFHTPNLWK	2	TFHTPNLWK2	12256.1	7257.78	12368.9
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	TFHTPNLWK	TFHTPNLWK	3	TFHTPNLWK3	44655.6	48352.1	44879.6
P47196	P47196	AKT1_RAT	Akt1	RAC-alpha serine/threonine-protein kinase	1	TFHVETPEEREEWTTAIQTVADGLK	TFHVETPEEREEWTTAIQTVADGLK	4	TFHVETPEEREEWTTAIQTVADGLK4	5306.89	7510.79	
P19804	A0A8I6A4T4;Q05982;P19804	NDKB_RAT	Nme2	Nucleoside diphosphate kinase B	0	TFIAIKPDGVQR	TFIAIKPDGVQR	2	TFIAIKPDGVQR2	32883.3	21464.4	29392.3
P19804	A0A8I6A4T4;Q05982;P19804	NDKB_RAT	Nme2	Nucleoside diphosphate kinase B	0	TFIAIKPDGVQR	TFIAIKPDGVQR	3	TFIAIKPDGVQR3	703668	647387	672756
E9PU15	E9PU15	E9PU15_RAT	Dicer1	Endoribonuclease Dicer	1	TFIAVLLTK	TFIAVLLTK	2	TFIAVLLTK2	7551.27	5205.14	4892.54
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	TFIFSDLEYMGQSPGFYK	TFIFSDLEYMGQSPGFYK	3	TFIFSDLEYMGQSPGFYK3	2591.13		8808.59
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	TFIGIFLIDGVTGR	TFIGIFLIDGVTGR	2	TFIGIFLIDGVTGR2	1826.9	3026.36	
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	TFIGIFLIDGVTGR	TFIGIFLIDGVTGR	3	TFIGIFLIDGVTGR3	3967.57		
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	TFILTFIR	TFILTFIR	2	TFILTFIR2	6.05804e+06	5.58999e+06	4.84564e+06
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	TFILTFIRIPLAAR	TFILTFIRIPLAAR	3	TFILTFIRIPLAAR3	41372.5	23876.3	32952.2
A0A8I5ZQ24	A0A8I5ZQ24	A0A8I5ZQ24_RAT	Atp6v1h	V-type proton ATPase subunit H	1	TFINLMTHISK	TFINLMTHISK	3	TFINLMTHISK3			3949.81
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	TFIPYPLPR	TFIPYPLPR	2	TFIPYPLPR2	57513.3	58282.6	68310.6
M0R7E7	M0R7E7	M0R7E7_RAT	Map2k3	Mitogen activated protein kinase kinase 3	1	TFITIGDR	TFITIGDR	2	TFITIGDR2	41067.7	40572.6	31495.9
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	TFITQQGIK	TFITQQGIK	2	TFITQQGIK2	91445.6	93303.4	89926.2
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	TFIVGAQMNVK	TFIVGAQMNVK	2	TFIVGAQMNVK2	24832.9	17071.1	24035.2
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	TFKDEELFPLQVVMK	TFKDEELFPLQVVMK	3	TFKDEELFPLQVVMK3	3938.73	5188.81	11339.1
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	TFKDLHFLEELQLGHNR	TFKDLHFLEELQLGHNR	3	TFKDLHFLEELQLGHNR3	31645.8	34237.2	34028.9
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	TFKDLHFLEELQLGHNR	TFKDLHFLEELQLGHNR	4	TFKDLHFLEELQLGHNR4	64724.7	94811.5	70287.8
B0BN72	B0BN72	MCRI1_RAT	Mcrip1	Mapk-regulated corepressor-interacting protein 1	1	TFKPIDLSDLK	TFKPIDLSDLK	3	TFKPIDLSDLK3	6980.92	3852.53	5839.31
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	TFLAACCDTFGMK	TFLAAC(UniMod:4)C(UniMod:4)DTFGMK	2	TFLAAC(UniMod:4)C(UniMod:4)DTFGMK2	16611.1	15446.1	11326.6
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	TFLALINQVFPAEEDSK	TFLALINQVFPAEEDSK	2	TFLALINQVFPAEEDSK2	15595.6	10705.4	5434.55
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	TFLALINQVFPAEEDSK	TFLALINQVFPAEEDSK	3	TFLALINQVFPAEEDSK3	9663.86	4212.48	5920.26
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	TFLASVQWQR	TFLASVQWQR	2	TFLASVQWQR2	13462.6	14369.9	6831.18
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	TFLDAGHK	TFLDAGHK	2	TFLDAGHK2	266221	196886	182409
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	TFLDDPIWR	TFLDDPIWR	2	TFLDDPIWR2	125405	123814	101648
D3ZN06	D3ZN06	D3ZN06_RAT	Cd248	CD248 molecule	1	TFLEAWR	TFLEAWR	2	TFLEAWR2	2.19831e+06	2.52767e+06	2.38954e+06
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	TFLEGFR	TFLEGFR	2	TFLEGFR2	61622.2	83065.5	54676.3
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	TFLEINEEGTEAAAGTGSEVNFR	TFLEINEEGTEAAAGTGSEVNFR	3	TFLEINEEGTEAAAGTGSEVNFR3	46055.2	27510.9	33699.1
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	TFLEYLDYEK	TFLEYLDYEK	2	TFLEYLDYEK2	40549.1	44261.9	41106.5
D3ZCG1	D3ZCG1	D3ZCG1_RAT	Dipk2b	Divergent protein kinase domain 2B	1	TFLGLDK	TFLGLDK	2	TFLGLDK2	26518.7	27928.8	29099
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	TFLGYLVK	TFLGYLVK	2	TFLGYLVK2	20436.1	19087.9	14365.4
F1LYQ4	F1LYQ4	F1LYQ4_RAT	AABR07058124.2	Ig-like domain-containing protein	1	TFLLCQGTVR	TFLLC(UniMod:4)QGTVR	2	TFLLC(UniMod:4)QGTVR2	6370.27		
P25093	P25093	FAAA_RAT	Fah	Fumarylacetoacetase	1	TFLLDGDEVIITGHCQGDGYR	TFLLDGDEVIITGHC(UniMod:4)QGDGYR	3	TFLLDGDEVIITGHC(UniMod:4)QGDGYR3	3081.99	3332.28	6390.52
M0RAP5	A0A0G2K1T3;M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	0	TFLLDSDYER	TFLLDSDYER	2	TFLLDSDYER2	7996.44	10393.5	7719.01
A0A8I5ZS69	A0A8I5ZS69	A0A8I5ZS69_RAT	Snx6	Sorting nexin	1	TFLLEYHNR	TFLLEYHNR	2	TFLLEYHNR2	12474.1	15357.3	20747.4
A0A8I5ZS69	A0A8I5ZS69	A0A8I5ZS69_RAT	Snx6	Sorting nexin	1	TFLLEYHNR	TFLLEYHNR	3	TFLLEYHNR3	92645.7	107005	100688
A0A8I6GC23	A0A8I6GC23	A0A8I6GC23_RAT	ENSRNOG00000071049	Ig-like domain-containing protein	1	TFLNWILQR	TFLNWILQR	2	TFLNWILQR2	80159.5	40482.6	45561
A0A8I6GC23	A0A8I6GC23	A0A8I6GC23_RAT	ENSRNOG00000071049	Ig-like domain-containing protein	1	TFLNWILQRPGQSPK	TFLNWILQRPGQSPK	2	TFLNWILQRPGQSPK2	7944.16		14926
A0A8I6GC23	A0A8I6GC23	A0A8I6GC23_RAT	ENSRNOG00000071049	Ig-like domain-containing protein	1	TFLNWILQRPGQSPK	TFLNWILQRPGQSPK	3	TFLNWILQRPGQSPK3	274572	210977	227692
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	TFLPALCK	TFLPALC(UniMod:4)K	2	TFLPALC(UniMod:4)K2	36011.7	41663.3	34288.3
Q4KM77	A0A8I5ZSD0;Q4KM77	EI24_RAT	Ei24	Etoposide-induced protein 2.4 homolog	0	TFLQDLGR	TFLQDLGR	2	TFLQDLGR2	64471.6	66584.6	58696.7
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	TFLQELER	TFLQELER	2	TFLQELER2	20024.2	19665.9	8624.97
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	TFLSAELNLEQSK	TFLSAELNLEQSK	2	TFLSAELNLEQSK2	12967.9		7306.12
O88788	O88788	AG10B_RAT	Alg10b	Putative Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase	1	TFLSLVWK	TFLSLVWK	2	TFLSLVWK2	11925.8	11914.8	11688.9
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	TFLSTCCEK	TFLSTC(UniMod:4)C(UniMod:4)EK	2	TFLSTC(UniMod:4)C(UniMod:4)EK2	31105.3	32775.6	23043.2
Q68FW9	Q68FW9	CSN3_RAT	Cops3	COP9 signalosome complex subunit 3	1	TFLTLSLQDMASR	TFLTLSLQDMASR	2	TFLTLSLQDMASR2	47337.3	89471.3	40046
B2RYP8	B2RYP8	B2RYP8_RAT	Tubgcp2	Gamma-tubulin complex component	1	TFLVDPNLDLSIR	TFLVDPNLDLSIR	2	TFLVDPNLDLSIR2	14625.7	4970.27	8847.01
F1LU14	F1LU14	F1LU14_RAT	Snx32	Sorting nexin	1	TFLVEYHTR	TFLVEYHTR	3	TFLVEYHTR3	17052.9	10315.6	10949.8
D3ZE05	D3ZE05	D3ZE05_RAT	Cilp2	Cartilage intermediate layer protein 2	1	TFLVGALTVR	TFLVGALTVR	2	TFLVGALTVR2	37294.2	37825.8	41691.6
Q68FR6	A0A8I6AKG3;A0A8I5Y6C6;Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	0	TFLVGER	TFLVGER	2	TFLVGER2	2.56444e+06	2.62601e+06	2.65534e+06
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	TFLVIPELAQELHVWTDK	TFLVIPELAQELHVWTDK	3	TFLVIPELAQELHVWTDK3	75317.7	87846.4	90632
P07335	P07335	KCRB_RAT	Ckb	Creatine kinase B-type	1	TFLVWINEEDHLR	TFLVWINEEDHLR	2	TFLVWINEEDHLR2	16180.6	14030.7	9699.93
P07335	P07335	KCRB_RAT	Ckb	Creatine kinase B-type	1	TFLVWINEEDHLR	TFLVWINEEDHLR	3	TFLVWINEEDHLR3	87652.4	74366.8	46933.8
Q5BQE6	Q5BQE6	DHC24_RAT	Dhcr24	Delta(24)-sterol reductase	1	TFMCTGR	TFMC(UniMod:4)TGR	2	TFMC(UniMod:4)TGR2	30829.8	28970.9	26249.4
Q5BQE6	Q5BQE6	DHC24_RAT	Dhcr24	Delta(24)-sterol reductase	1	TFMCTGRPGWLTVSLR	TFMC(UniMod:4)TGRPGWLTVSLR	3	TFMC(UniMod:4)TGRPGWLTVSLR3	9639.2	10377.7	17528.8
D3ZU48	D3ZU48	D3ZU48_RAT	Klhdc4	Kelch domain containing 4	1	TFMYNELYIYSIR	TFMYNELYIYSIR	2	TFMYNELYIYSIR2	6376.09	7216.27	5500.22
D3ZU48	D3ZU48	D3ZU48_RAT	Klhdc4	Kelch domain containing 4	1	TFMYNELYIYSIR	TFMYNELYIYSIR	3	TFMYNELYIYSIR3	11685.7		8103.89
D3ZBT4	D3ZBT4	D3ZBT4_RAT	Mtf1	Metal-regulatory transcription factor 1	1	TFNCESQGCSK	TFNC(UniMod:4)ESQGC(UniMod:4)SK	2	TFNC(UniMod:4)ESQGC(UniMod:4)SK2	3020.99	2225.72	
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	TFNDYFR	TFNDYFR	2	TFNDYFR2	35483.8	33237.9	35000.3
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	TFNGSIELCR	TFNGSIELC(UniMod:4)R	2	TFNGSIELC(UniMod:4)R2	57950	67745.9	65412.6
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	TFNIDLVSK	TFNIDLVSK	2	TFNIDLVSK2	25923.1	26718.3	22939.7
B5DEZ6	B5DEZ6;A0A8I6AB87	B5DEZ6_RAT	Gnpda2	Glucosamine-6-phosphate isomerase	0	TFNMDEYVGLPR	TFNMDEYVGLPR	2	TFNMDEYVGLPR2	8129.4		8504.86
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	TFNPLVVVGLSR	TFNPLVVVGLSR	2	TFNPLVVVGLSR2	138998	152157	143248
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	TFNPLVVVGLSR	TFNPLVVVGLSR	3	TFNPLVVVGLSR3	104863	128563	107999
P62845	D3ZAK6;P62845	RS15_RAT	Rps15	Small ribosomal subunit protein uS19	0	TFNQVEIKPEMIGHYLGEFSITYKPVK	TFNQVEIKPEMIGHYLGEFSITYKPVK	4	TFNQVEIKPEMIGHYLGEFSITYKPVK4	6684.97	5406.42	
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	TFNVALDAR	TFNVALDAR	2	TFNVALDAR2	144886	155245	171646
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	TFNVDMYEEIHR	TFNVDMYEEIHR	3	TFNVDMYEEIHR3	7463.89	6520.47	6190.38
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	TFNVDMYEEIHRK	TFNVDMYEEIHRK	3	TFNVDMYEEIHRK3	24956	42530.7	28403.6
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	TFNVDMYEEIHRK	TFNVDMYEEIHRK	4	TFNVDMYEEIHRK4	30748.7	41576.6	70102.4
D4AAE9	D4AAE9	D4AAE9_RAT	Cisd2	CDGSH iron-sulfur domain-containing protein 2	1	TFPACDGSHNK	TFPAC(UniMod:4)DGSHNK	2	TFPAC(UniMod:4)DGSHNK2	33321.9	31371.9	23474.5
D4AAE9	D4AAE9	D4AAE9_RAT	Cisd2	CDGSH iron-sulfur domain-containing protein 2	1	TFPACDGSHNK	TFPAC(UniMod:4)DGSHNK	3	TFPAC(UniMod:4)DGSHNK3	69658.6	64583.5	79270.3
A0A8I5Y656	A0A8I5Y656;A0A8I6G9C0	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	0	TFPAHDYFK	TFPAHDYFK	2	TFPAHDYFK2	24017.1	32529.8	17691.4
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	TFPEQALLR	TFPEQALLR	2	TFPEQALLR2	82214.5	92764	63712.6
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	TFPFHFMLDR	TFPFHFMLDR	2	TFPFHFMLDR2	61086.6	71732.7	70711.9
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	TFPFHFMLDR	TFPFHFMLDR	3	TFPFHFMLDR3	214242	209059	184118
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	TFPFHFMLDRDLAILQLGNGIR	TFPFHFMLDRDLAILQLGNGIR	4	TFPFHFMLDRDLAILQLGNGIR4	17796.3	20643.3	6613.08
B2GUZ6	B2GUZ6	B2GUZ6_RAT	Rtn4ip1	Reticulon 4 interacting protein 1	1	TFPFSEVPEAFLK	TFPFSEVPEAFLK	2	TFPFSEVPEAFLK2		7020.34	3317.71
P17046	P17046	LAMP2_RAT	Lamp2	Lysosome-associated membrane glycoprotein 2	1	TFPGAVPK	TFPGAVPK	2	TFPGAVPK2	126743	115038	135339
O70196	O70196	PPCE_RAT	Prep	Prolyl endopeptidase	1	TFPLDVGSVVGYSGR	TFPLDVGSVVGYSGR	2	TFPLDVGSVVGYSGR2	5866.11	12646.9	4899.11
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	TFPTHPYFSAQLGAGQLSLYNILK	TFPTHPYFSAQLGAGQLSLYNILK	3	TFPTHPYFSAQLGAGQLSLYNILK3		6810.45	4780.47
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	TFPTVNPSTGEVICQVAEGNK	TFPTVNPSTGEVIC(UniMod:4)QVAEGNK	3	TFPTVNPSTGEVIC(UniMod:4)QVAEGNK3	47769.1	44341.8	45288.5
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	TFPTVNPSTGEVICQVAEGNKEDVDK	TFPTVNPSTGEVIC(UniMod:4)QVAEGNKEDVDK	3	TFPTVNPSTGEVIC(UniMod:4)QVAEGNKEDVDK3	198637	171050	164798
Q63159	Q63159	COQ3_RAT	Coq3	Ubiquinone biosynthesis O-methyltransferase, mitochondrial	1	TFQALAHSWWDEQGK	TFQALAHSWWDEQGK	3	TFQALAHSWWDEQGK3	9485.1	7417.71	6012.88
P14604	P14604	ECHM_RAT	Echs1	Enoyl-CoA hydratase, mitochondrial	1	TFQDCYSGK	TFQDC(UniMod:4)YSGK	2	TFQDC(UniMod:4)YSGK2	63743.4	66722.2	74776.4
Q99JD4	Q99JD4;F1LNQ9	CLAP2_RAT	Clasp2	CLIP-associating protein 2	0	TFQDGATK	TFQDGATK	2	TFQDGATK2	69164.4	78651.3	
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	TFQEASELPVSGQMDDATR	TFQEASELPVSGQMDDATR	3	TFQEASELPVSGQMDDATR3	53946.8	54244	61731.8
F7EWF8	F7EWF8	F7EWF8_RAT	Anapc2	Anaphase-promoting complex subunit 2	1	TFQEMVQR	TFQEMVQR	2	TFQEMVQR2	7937.55		7956.38
Q5FVL8	Q5FVL8	Q5FVL8_RAT	Abcb10	ATP binding cassette subfamily B member 10	1	TFQGALEFR	TFQGALEFR	2	TFQGALEFR2	12043.7	13463.4	20176.4
D3ZNF4	D3ZNF4;A0A0G2JY80	D3ZNF4_RAT	Tbl1xr1	TBL1X receptor 1	0	TFQGHTNEVNAIK	TFQGHTNEVNAIK	3	TFQGHTNEVNAIK3	13447.1	5041.1	5942.18
P17046	P17046	LAMP2_RAT	Lamp2	Lysosome-associated membrane glycoprotein 2	1	TFQINTFNLK	TFQINTFNLK	2	TFQINTFNLK2	223636	231190	266567
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	TFQLQLLSPSSSVVPAFNTGTITQVIK	TFQLQLLSPSSSVVPAFNTGTITQVIK	3	TFQLQLLSPSSSVVPAFNTGTITQVIK3	10371.4	15647	13848.8
A0A8I6AJP4	A0A8I6AJP4	A0A8I6AJP4_RAT	Phactr4	Phosphatase and actin regulator 4	1	TFQMVPEVEFSPSLDR	TFQMVPEVEFSPSLDR	2	TFQMVPEVEFSPSLDR2	35196.7	15263.9	11338.4
G3V904	G3V904	G3V904_RAT	Pld4	Phospholipase D family, member 4	1	TFQTYWVLGTPQAVLPKPWPR	TFQTYWVLGTPQAVLPKPWPR	3	TFQTYWVLGTPQAVLPKPWPR3	4334.32	4325.09	6041.78
B0BNB0	B0BNB0	B0BNB0_RAT	Golt1b	Golgi transport 1B	1	TFRFFFQK	TFRFFFQK	2	TFRFFFQK2	103202	112668	110224
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	TFRPAAMLIER	TFRPAAMLIER	3	TFRPAAMLIER3	77323.8	98433.3	76044.3
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	TFRPAAMLVER	TFRPAAMLVER	3	TFRPAAMLVER3	4146.71	6050.81	7269.18
Q9WU49	Q9WU49	CHSP1_RAT	Carhsp1	Calcium-regulated heat stable protein 1	1	TFSATVR	TFSATVR	2	TFSATVR2	17847.9		19712.2
Q5BK49	Q5BK49	TACT_RAT	Cd96	T-cell surface protein tactile	1	TFSCFLR	TFSC(UniMod:4)FLR	2	TFSC(UniMod:4)FLR2	16822.1	19924.7	20984.9
B1H220	B1H220	B1H220_RAT	Zbtb3	Zinc finger and BTB domain containing 3	1	TFSCSYTLR	TFSC(UniMod:4)SYTLR	2	TFSC(UniMod:4)SYTLR2	127800	132758	94302.5
D3ZLM5	D3ZLM5	D3ZLM5_RAT	Nhlrc2	NHL repeat containing 2	1	TFSDTDGLLIVGVHSAK	TFSDTDGLLIVGVHSAK	3	TFSDTDGLLIVGVHSAK3	5613.44	7358.62	5450.81
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	TFSEASIWSQQSSR	TFSEASIWSQQSSR	2	TFSEASIWSQQSSR2	21519.2	20358.9	19686.1
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	TFSEASIWSQQSSRPSLK	TFSEASIWSQQSSRPSLK	3	TFSEASIWSQQSSRPSLK3	30453.1	39380.2	45603
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TFSEILNR	TFSEILNR	2	TFSEILNR2	67989.3	70622.3	57559
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	TFSEVTDLDNEVNGMLR	TFSEVTDLDNEVNGMLR	2	TFSEVTDLDNEVNGMLR2	7508.09	12796.7	13831.1
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	TFSEVTDLDNEVNGMLR	TFSEVTDLDNEVNGMLR	3	TFSEVTDLDNEVNGMLR3	17440.7	3576.61	14017.4
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	TFSGHEDCVR	TFSGHEDC(UniMod:4)VR	2	TFSGHEDC(UniMod:4)VR2		2360.44	2023.53
Q7TP52	Q7TP52	CMBL_RAT	Cmbl	Carboxymethylenebutenolidase homolog	1	TFSGQTHGFVHR	TFSGQTHGFVHR	2	TFSGQTHGFVHR2	4999.37		
Q7TP52	Q7TP52	CMBL_RAT	Cmbl	Carboxymethylenebutenolidase homolog	1	TFSGQTHGFVHR	TFSGQTHGFVHR	3	TFSGQTHGFVHR3	141750	38119.3	19438
A0A8I5ZNG4	A0A8I5ZNG4	A0A8I5ZNG4_RAT	Rictor	RPTOR independent companion of MTOR, complex 2	1	TFSHDGGGLPSGTGSLVK	TFSHDGGGLPSGTGSLVK	3	TFSHDGGGLPSGTGSLVK3	6014.74	6209.59	9056.39
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	TFSHELSDFGLESTTGEIPVVAIR	TFSHELSDFGLESTTGEIPVVAIR	3	TFSHELSDFGLESTTGEIPVVAIR3	169863	177606	155915
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	TFSHELSDFGLESTTGEIPVVAIR	TFSHELSDFGLESTTGEIPVVAIR	4	TFSHELSDFGLESTTGEIPVVAIR4	12935.8	12096.1	27638.7
Q9JLZ1	Q9JLZ1	GLRX3_RAT	Glrx3	Glutaredoxin-3	1	TFSNWPTYPQLYVR	TFSNWPTYPQLYVR	2	TFSNWPTYPQLYVR2	66271.9	66204.5	52134.1
Q9JLZ1	Q9JLZ1	GLRX3_RAT	Glrx3	Glutaredoxin-3	1	TFSNWPTYPQLYVR	TFSNWPTYPQLYVR	3	TFSNWPTYPQLYVR3	12851.7	8473.12	11969
Q7TNZ6	Q7TNZ6	STRAA_RAT	Strada	STE20-related kinase adapter protein alpha	1	TFSPHFHNFVEQCLQR	TFSPHFHNFVEQC(UniMod:4)LQR	4	TFSPHFHNFVEQC(UniMod:4)LQR4	8364.44	4487.83	
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TFSSIPVSR	TFSSIPVSR	2	TFSSIPVSR2	458466	580218	349915
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	TFSSNALLMYLATR	TFSSNALLMYLATR	2	TFSSNALLMYLATR2	2207.76	4128.01	9882.84
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	TFSSNALLMYLATR	TFSSNALLMYLATR	3	TFSSNALLMYLATR3	1412.78		770.81
Q62839	M0R5N1;Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	0	TFSSTESLR	TFSSTESLR	2	TFSSTESLR2	59109.8	68381.7	64298.2
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	TFSTALSALR	TFSTALSALR	2	TFSTALSALR2	16443.2	11634.8	12091.4
G3V6D1	G3V6D1	G3V6D1_RAT	Nagpa	N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase	1	TFSVLEPGGPGGCAQR	TFSVLEPGGPGGC(UniMod:4)AQR	2	TFSVLEPGGPGGC(UniMod:4)AQR2	4793.89	5956.62	
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	TFSVWYVPEVTGTHK	TFSVWYVPEVTGTHK	2	TFSVWYVPEVTGTHK2	1.56813e+06	1.51508e+06	1.4056e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	TFSVWYVPEVTGTHK	TFSVWYVPEVTGTHK	3	TFSVWYVPEVTGTHK3	3.11624e+06	3.80248e+06	3.76999e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	TFSVWYVPEVTGTHK	TFSVWYVPEVTGTHK	4	TFSVWYVPEVTGTHK4	11068.6	16266.7	13044.7
D3ZYS7	D3ZYS7	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	1	TFSWASVTSK	TFSWASVTSK	2	TFSWASVTSK2	114459	90323.2	105495
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	TFSYAGFEMQPK	TFSYAGFEMQPK	2	TFSYAGFEMQPK2	402776	394803	436110
Q69BT7	Q69BT7	TPPC4_RAT	Trappc4	Trafficking protein particle complex subunit 4	1	TFSYPLDLLLK	TFSYPLDLLLK	2	TFSYPLDLLLK2	37428.6	34241.4	32824.7
Q9Z1P2	Q9QXQ0;Q8R4I6;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	TFTAWCNSHLR	TFTAWC(UniMod:4)NSHLR	2	TFTAWC(UniMod:4)NSHLR2	454027	458534	426252
Q9Z1P2	Q9QXQ0;Q8R4I6;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	TFTAWCNSHLR	TFTAWC(UniMod:4)NSHLR	3	TFTAWC(UniMod:4)NSHLR3	128243	151154	162400
Q9Z1P2	Q9QXQ0;Q8R4I6;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	TFTAWCNSHLRK	TFTAWC(UniMod:4)NSHLRK	3	TFTAWC(UniMod:4)NSHLRK3	16910.8	15853.9	27031
Q9Z1P2	Q9QXQ0;Q8R4I6;A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	TFTAWCNSHLRK	TFTAWC(UniMod:4)NSHLRK	4	TFTAWC(UniMod:4)NSHLRK4	14020.9	19384.7	19154.8
F1LVL2	F1LVL2	F1LVL2_RAT	Icoslg	Inducible T-cell co-stimulator ligand	1	TFTCMSK	TFTC(UniMod:4)MSK	1	TFTC(UniMod:4)MSK1	5836.06	6236.3	3563.86
F1LVL2	F1LVL2	F1LVL2_RAT	Icoslg	Inducible T-cell co-stimulator ligand	1	TFTCMSK	TFTC(UniMod:4)MSK	2	TFTC(UniMod:4)MSK2	933693	874459	880184
P62138	P62138;P63088;P62142	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	0	TFTDCFNCLPIAAIVDEK	TFTDC(UniMod:4)FNC(UniMod:4)LPIAAIVDEK	3	TFTDC(UniMod:4)FNC(UniMod:4)LPIAAIVDEK3	140470	124767	134663
O35854	O35854	BCAT2_RAT	Bcat2	Branched-chain-amino-acid aminotransferase, mitochondrial	1	TFTDHMLMVEWNSK	TFTDHMLMVEWNSK	2	TFTDHMLMVEWNSK2	5563.47	4440.73	1728.77
O35854	O35854	BCAT2_RAT	Bcat2	Branched-chain-amino-acid aminotransferase, mitochondrial	1	TFTDHMLMVEWNSK	TFTDHMLMVEWNSK	3	TFTDHMLMVEWNSK3	43073.9	39504.8	33521.6
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	TFTEMDSHEEK	TFTEMDSHEEK	2	TFTEMDSHEEK2	45775.6	38847.2	55316.7
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	TFTEMDSHEEK	TFTEMDSHEEK	3	TFTEMDSHEEK3	149389	155388	215034
A0A8I5ZNG4	A0A8I5ZNG4	A0A8I5ZNG4_RAT	Rictor	RPTOR independent companion of MTOR, complex 2	1	TFTEPSVDFNHSDDFTNISPAQK	TFTEPSVDFNHSDDFTNISPAQK	3	TFTEPSVDFNHSDDFTNISPAQK3	5477.43	2613.25	
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	TFTETFFMR	TFTETFFMR	2	TFTETFFMR2	13273.5	13572.6	
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	TFTFDAVYDWNAK	TFTFDAVYDWNAK	2	TFTFDAVYDWNAK2	5607.51	4700.43	
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	TFTFDTVFGPESK	TFTFDTVFGPESK	2	TFTFDTVFGPESK2	7137.59		7065.25
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	TFTINPER	TFTINPER	2	TFTINPER2	66952.6	57053.5	22547.9
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	TFTINYLQETTLAANQPLSR	TFTINYLQETTLAANQPLSR	3	TFTINYLQETTLAANQPLSR3		4193.42	2785.44
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	TFTMEGVR	TFTMEGVR	2	TFTMEGVR2	35493.6	44151.4	43149.4
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	TFTMMGPSDSDNFSHNLR	TFTMMGPSDSDNFSHNLR	3	TFTMMGPSDSDNFSHNLR3	7542.21	3578.37	
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	TFTPLYFLVEPVDTLSVR	TFTPLYFLVEPVDTLSVR	3	TFTPLYFLVEPVDTLSVR3	33875.7		
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	TFTQDPTAYAR	TFTQDPTAYAR	2	TFTQDPTAYAR2	219664	238812	242603
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	TFTTQETITNAETAK	TFTTQETITNAETAK	2	TFTTQETITNAETAK2	14958	17189	20862.4
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	TFTTQETITNAETAK	TFTTQETITNAETAK	3	TFTTQETITNAETAK3	14584.2	12277.6	7299.26
Q62651	Q62651	ECH1_RAT	Ech1	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial	1	TFTVIEK	TFTVIEK	2	TFTVIEK2	49818.9	49219.3	48864.1
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	TFTWLVR	TFTWLVR	2	TFTWLVR2	280665	320594	363563
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	TFVAGDGK	TFVAGDGK	2	TFVAGDGK2	280806	257455	270690
A0A8I5ZNK2	O88506;A0A8I5ZNK2	A0A8I5ZNK2_RAT	Oxsr1	non-specific serine/threonine protein kinase	0	TFVGTPCWMAPEVMEQVR	TFVGTPC(UniMod:4)WMAPEVMEQVR	3	TFVGTPC(UniMod:4)WMAPEVMEQVR3	8014.98	12348.6	7492.42
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	TFVHEWAHFR	TFVHEWAHFR	3	TFVHEWAHFR3	12604.8	10983.3	18567.4
D3ZTW8	D3ZTW8	D3ZTW8_RAT	Mrpl27	Mitochondrial ribosomal protein L27	1	TFVHVVPAKPEGTFK	TFVHVVPAKPEGTFK	4	TFVHVVPAKPEGTFK4	13516.7		3225.89
P47860	P47860;P47858;P30835	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	0	TFVLEVMGR	TFVLEVMGR	2	TFVLEVMGR2	76519.5	161781	80522.3
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	TFVLSAAQPSPTAHPIGSK	TFVLSAAQPSPTAHPIGSK	2	TFVLSAAQPSPTAHPIGSK2	42151	52819	43451.3
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	TFVLSAAQPSPTAHPIGSK	TFVLSAAQPSPTAHPIGSK	3	TFVLSAAQPSPTAHPIGSK3	105056	90728.5	88005
Q6P7Q1	Q6P7Q1	BABA2_RAT	Babam2	BRISC and BRCA1-A complex member 2	1	TFVPQFQEAAFANGK	TFVPQFQEAAFANGK	2	TFVPQFQEAAFANGK2	43100.9	31155.3	46342.2
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	TFVQEDVYDEFVER	TFVQEDVYDEFVER	2	TFVQEDVYDEFVER2	28527.1	35040.6	45285.8
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	TFVQEDVYDEFVER	TFVQEDVYDEFVER	3	TFVQEDVYDEFVER3	52321.2	52545.6	41868.3
P54313	P54313	GBB2_RAT	Gnb2	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2	1	TFVSGACDASIK	TFVSGAC(UniMod:4)DASIK	2	TFVSGAC(UniMod:4)DASIK2	85747.9	83312.8	59412.7
O35353	O35353	GBB4_RAT	Gnb4	Guanine nucleotide-binding protein subunit beta-4	1	TFVSGACDASSK	TFVSGAC(UniMod:4)DASSK	2	TFVSGAC(UniMod:4)DASSK2	763851	727103	738675
P62963	P62963	PROF1_RAT	Pfn1	Profilin-1	1	TFVSITPAEVGVLVGK	TFVSITPAEVGVLVGK	2	TFVSITPAEVGVLVGK2	2.64894e+06	2.28368e+06	2.43498e+06
P62963	P62963	PROF1_RAT	Pfn1	Profilin-1	1	TFVSITPAEVGVLVGK	TFVSITPAEVGVLVGK	3	TFVSITPAEVGVLVGK3	135078	108175	99770.2
P62963	P62963	PROF1_RAT	Pfn1	Profilin-1	1	TFVSITPAEVGVLVGKDR	TFVSITPAEVGVLVGKDR	3	TFVSITPAEVGVLVGKDR3	34202.3	41102.8	43493.6
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	TFVSQASATMQQYAQR	TFVSQASATMQQYAQR	2	TFVSQASATMQQYAQR2	26488.2	21795.9	21124.5
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	TFVSQASATMQQYAQR	TFVSQASATMQQYAQR	3	TFVSQASATMQQYAQR3	33376.3	41044.7	39488.9
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	TFVTEFK	TFVTEFK	1	TFVTEFK1	868.817	3780.62	
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	TFVTEFK	TFVTEFK	2	TFVTEFK2	190964	233808	216840
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	TFVTYDTFR	TFVTYDTFR	2	TFVTYDTFR2	31444.6	33909.1	44622.7
Q06000	Q06000	LIPL_RAT	Lpl	Lipoprotein lipase	1	TFVVIHGWTVTGMYESWVPK	TFVVIHGWTVTGMYESWVPK	3	TFVVIHGWTVTGMYESWVPK3	7257.94	4605.14	15024.8
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	TFVVQGFGNVGLHSMR	TFVVQGFGNVGLHSMR	2	TFVVQGFGNVGLHSMR2	14370.3	9627.54	11513.8
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	TFVVQGFGNVGLHSMR	TFVVQGFGNVGLHSMR	3	TFVVQGFGNVGLHSMR3	101205	99572.7	102972
F7ETI3	F7ETI3	F7ETI3_RAT	Wdr41	WD repeat domain 41	1	TFWSPTPQLDAQQEIK	TFWSPTPQLDAQQEIK	2	TFWSPTPQLDAQQEIK2	1856.54	3955.05	4136.03
A0A8I5Y8H6	A0A8I5Y8H6	A0A8I5Y8H6_RAT	Psd3	Pleckstrin and Sec7 domain containing 3	1	TFYAVLK	TFYAVLK	2	TFYAVLK2	6382.45	8018.04	5426.92
D4A565	D4A565	D4A565_RAT	Ndufb5	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial	1	TFYDGPEK	TFYDGPEK	2	TFYDGPEK2	115683	120601	123235
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	TFYGLHQDFPSVVVVGLGK	TFYGLHQDFPSVVVVGLGK	3	TFYGLHQDFPSVVVVGLGK3	8265.84	4946.48	9567.87
B0BNE3	B0BNE3	B0BNE3_RAT	Trappc5	Trafficking protein particle complex subunit 5	1	TFYIIER	TFYIIER	2	TFYIIER2	39219.8	32672.4	33784.5
B0BNE3	B0BNE3	B0BNE3_RAT	Trappc5	Trafficking protein particle complex subunit 5	1	TFYIIEREPLINTYISVPK	TFYIIEREPLINTYISVPK	3	TFYIIEREPLINTYISVPK3	4297.05	8212.26	3206.66
D4ACC1	D4ACC1	D4ACC1_RAT	Dapp1	Dual adaptor of phosphotyrosine and 3-phosphoinositides 1	1	TFYLCAK	TFYLC(UniMod:4)AK	2	TFYLC(UniMod:4)AK2	37540.3	39079.4	46655.4
D4A7H9	D4A7H9	D4A7H9_RAT	Chmp7	Charged multivesicular body protein 7	1	TFYLVLLQLQK	TFYLVLLQLQK	2	TFYLVLLQLQK2	788.544	1022.27	
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	TFYPFAGHDLAELPVSSPLCHAVLK	TFYPFAGHDLAELPVSSPLC(UniMod:4)HAVLK	4	TFYPFAGHDLAELPVSSPLC(UniMod:4)HAVLK4	4804.75	5424.05	5735.27
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TFYQIGDSWEK	TFYQIGDSWEK	2	TFYQIGDSWEK2	173887	366719	334407
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TFYQIGDSWEK	TFYQIGDSWEK	3	TFYQIGDSWEK3	15115.7	9492.74	19893.9
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TFYQIGDSWEKFVHGVR	TFYQIGDSWEKFVHGVR	3	TFYQIGDSWEKFVHGVR3	18140.5	31829.6	12016.7
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TFYQIGDSWEKFVHGVR	TFYQIGDSWEKFVHGVR	4	TFYQIGDSWEKFVHGVR4	80248.4	106213	78078.7
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TFYSCTTEGR	TFYSC(UniMod:4)TTEGR	2	TFYSC(UniMod:4)TTEGR2	355313	473204	438440
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TFYSCTTEGRQDGHLWCSTTSNYEQDQK	TFYSC(UniMod:4)TTEGRQDGHLWC(UniMod:4)STTSNYEQDQK	4	TFYSC(UniMod:4)TTEGRQDGHLWC(UniMod:4)STTSNYEQDQK4	6510.84	3573.07	3124.57
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	TFYVQADSPEDMR	TFYVQADSPEDMR	2	TFYVQADSPEDMR2	56823.4	48780.3	53754.5
F1MAF8	F1MAF8	F1MAF8_RAT	Atg2b	Autophagy related 2B	1	TGAALEIR	TGAALEIR	2	TGAALEIR2	7745.12	3366.49	
Q2PQA9	P56536;Q2PQA9;Q6QLM7	KINH_RAT	Kif5b	Kinesin-1 heavy chain	0	TGAEGAVLDEAK	TGAEGAVLDEAK	2	TGAEGAVLDEAK2	187987	192368	182926
Q63690	A0A8I6GCB5;Q63690	BAX_RAT	Bax	Apoptosis regulator BAX	0	TGAFLLQGFIQDR	TGAFLLQGFIQDR	2	TGAFLLQGFIQDR2	24257.7	24275	19955
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	TGAFSIPVIQIVYETLK	TGAFSIPVIQIVYETLK	2	TGAFSIPVIQIVYETLK2	3434.48	8119.72	7649.7
F7ETC0	F7ETC0	F7ETC0_RAT	Smpd1	Sphingomyelin phosphodiesterase	1	TGAGYWGEYSK	TGAGYWGEYSK	2	TGAGYWGEYSK2	8158.25	6859.84	9381.14
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	TGAHLELSLAK	TGAHLELSLAK	3	TGAHLELSLAK3	13689	17476.6	8300.4
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	TGAICAIDYTWNLLK	TGAIC(UniMod:4)AIDYTWNLLK	2	TGAIC(UniMod:4)AIDYTWNLLK2	93672.6	103247	104665
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	TGAICAIDYTWNLLK	TGAIC(UniMod:4)AIDYTWNLLK	3	TGAIC(UniMod:4)AIDYTWNLLK3	6413.94	12688.3	13080.8
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	TGAIIPELER	TGAIIPELER	2	TGAIIPELER2	170403	161979	158480
D3ZAI6	D3ZAI6	D3ZAI6_RAT	Nt5dc3	5'-nucleotidase domain containing 3	1	TGAIIPELR	TGAIIPELR	2	TGAIIPELR2	33253.9	38271.9	50693.3
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	TGAISGHSLK	TGAISGHSLK	2	TGAISGHSLK2	72510.1	77913.1	46792.4
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	TGAISLTPEGSQVLDPIK	TGAISLTPEGSQVLDPIK	2	TGAISLTPEGSQVLDPIK2	16942.3	9048.95	4840.65
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	TGAIVDVPVGDELLGR	TGAIVDVPVGDELLGR	2	TGAIVDVPVGDELLGR2	604247	495585	581949
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	TGAIVDVPVGDELLGR	TGAIVDVPVGDELLGR	3	TGAIVDVPVGDELLGR3	24751.4	26373.3	16904.3
P85971	P85971	6PGL_RAT	Pgls	6-phosphogluconolactonase	1	TGALCWFLDEAAAR	TGALC(UniMod:4)WFLDEAAAR	2	TGALC(UniMod:4)WFLDEAAAR2	35804.7	23120.8	30143.2
P85971	P85971	6PGL_RAT	Pgls	6-phosphogluconolactonase	1	TGALCWFLDEAAAR	TGALC(UniMod:4)WFLDEAAAR	3	TGALC(UniMod:4)WFLDEAAAR3		3168.74	
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	TGALELLK	TGALELLK	2	TGALELLK2	4.19445e+06	4.04424e+06	4.27926e+06
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	TGALSAPR	TGALSAPR	2	TGALSAPR2	15164.3	16013	11644.5
P13838	P13838	LEUK_RAT	Spn	Leukosialin (Fragment)	1	TGALTLSR	TGALTLSR	2	TGALTLSR2	270578	314041	276343
P14882	P14882	PCCA_RAT	Pcca	Propionyl-CoA carboxylase alpha chain, mitochondrial	1	TGAQAVHPGYGFLSENK	TGAQAVHPGYGFLSENK	3	TGAQAVHPGYGFLSENK3	18721.9	13482.7	21252.6
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	TGASALHVAAAK	TGASALHVAAAK	2	TGASALHVAAAK2	11042	13848.5	7849.81
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	TGASCPSGGHVADIYLANINK	TGASC(UniMod:4)PSGGHVADIYLANINK	3	TGASC(UniMod:4)PSGGHVADIYLANINK3	37461.8	40223.3	30391.8
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	TGASEAVPSEGK	TGASEAVPSEGK	2	TGASEAVPSEGK2	2.31041e+06	2.63488e+06	2.3254e+06
Q5BJP6	Q5BJP6	RRF2M_RAT	Gfm2	Ribosome-releasing factor 2, mitochondrial	1	TGASFNYAVESIR	TGASFNYAVESIR	2	TGASFNYAVESIR2		3489.33	
A0A8I6GL39	A0A8I6GL39	A0A8I6GL39_RAT	Scamp2	Secretory carrier-associated membrane protein	1	TGASFQQAQEEFSQGIFSSR	TGASFQQAQEEFSQGIFSSR	3	TGASFQQAQEEFSQGIFSSR3	163232	178427	164290
Q8VHK0	Q8VHK0	ACOT8_RAT	Acot8	Acyl-coenzyme A thioesterase 8	1	TGASFSVR	TGASFSVR	2	TGASFSVR2	29459.4	30964.4	30253.2
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	TGASIDAVTESGLTPLHVASFMGHLPIVK	TGASIDAVTESGLTPLHVASFMGHLPIVK	4	TGASIDAVTESGLTPLHVASFMGHLPIVK4	2624.73	3129.03	4484.04
A0A0G2JTX7	A0A0G2JTX7	A0A0G2JTX7_RAT	Col6a5	Collagen type VI alpha 5 chain	1	TGASNVGAAIEHMR	TGASNVGAAIEHMR	3	TGASNVGAAIEHMR3	3226.05	4326.1	3004.27
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	TGASVLNK	TGASVLNK	2	TGASVLNK2	18113.7	23587.4	14468.2
D4A1B2	D4A1B2	D4A1B2_RAT	Arpin	Arpin	1	TGASWTDNIMAQK	TGASWTDNIMAQK	2	TGASWTDNIMAQK2	51146.4	51300.3	62439.9
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	TGATEHYLINVCK	TGATEHYLINVC(UniMod:4)K	2	TGATEHYLINVC(UniMod:4)K2	2184.28		
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	TGATEHYLINVCK	TGATEHYLINVC(UniMod:4)K	3	TGATEHYLINVC(UniMod:4)K3	9549.13	10616.1	13224.6
A0A8I5ZKD4	A0A8I5ZKD4	A0A8I5ZKD4_RAT	Nhlrc3	NHL repeat containing 3	1	TGAVYVAEIGAK	TGAVYVAEIGAK	2	TGAVYVAEIGAK2	26998.8	45996.3	30342.4
P49445	P49445	PTN7_RAT	Ptpn7	Tyrosine-protein phosphatase non-receptor type 7	1	TGCFIATR	TGC(UniMod:4)FIATR	2	TGC(UniMod:4)FIATR2	5242.55	4940.2	6588.82
A0A8I5ZNG4	A0A8I5ZNG4	A0A8I5ZNG4_RAT	Rictor	RPTOR independent companion of MTOR, complex 2	1	TGCHLLEVQSIITELCQNVR	TGC(UniMod:4)HLLEVQSIITELC(UniMod:4)QNVR	3	TGC(UniMod:4)HLLEVQSIITELC(UniMod:4)QNVR3	2714.79	15548.8	
D4A3L3	D4A3L3	D4A3L3_RAT	Megf9	Multiple EGF-like-domains 9	1	TGCLPCQCNNR	TGC(UniMod:4)LPC(UniMod:4)QC(UniMod:4)NNR	2	TGC(UniMod:4)LPC(UniMod:4)QC(UniMod:4)NNR2	7455.09		4194.19
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	TGCNVLLIQK	TGC(UniMod:4)NVLLIQK	2	TGC(UniMod:4)NVLLIQK2	197812	180401	184808
A1A5P5	A1A5P5	ARMC9_RAT	Armc9	LisH domain-containing protein ARMC9	1	TGCPVVGDHLISSQNAQQAR	TGC(UniMod:4)PVVGDHLISSQNAQQAR	3	TGC(UniMod:4)PVVGDHLISSQNAQQAR3	4588.55	8984.79	4744.5
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	TGCTDINECEIGAHNCGR	TGC(UniMod:4)TDINEC(UniMod:4)EIGAHNC(UniMod:4)GR	3	TGC(UniMod:4)TDINEC(UniMod:4)EIGAHNC(UniMod:4)GR3	64854.1	95933.4	68712.3
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	TGCYVALDQEAYTR	TGC(UniMod:4)YVALDQEAYTR	2	TGC(UniMod:4)YVALDQEAYTR2	21145	18521.3	19728
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	TGDAPAAPVPGSPSITMATR	TGDAPAAPVPGSPSITMATR	2	TGDAPAAPVPGSPSITMATR2	61473.6	70619	60072.9
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	TGDAPAAPVPGSPSITMATR	TGDAPAAPVPGSPSITMATR	3	TGDAPAAPVPGSPSITMATR3	7296.16	12126	13881.8
P81155	A0A8I5ZYN2;P81155	VDAC2_RAT	Vdac2	Voltage-dependent anion-selective channel protein 2	0	TGDFQLHTNVNNGTEFGGSIYQK	TGDFQLHTNVNNGTEFGGSIYQK	3	TGDFQLHTNVNNGTEFGGSIYQK3	143463	125414	145080
Q499N5	Q499N5	ACSF2_RAT	Acsf2	Medium-chain acyl-CoA ligase ACSF2, mitochondrial	1	TGDIASMDEQGFCR	TGDIASMDEQGFC(UniMod:4)R	2	TGDIASMDEQGFC(UniMod:4)R2	8087.18	8699.78	5729.64
F7FIC1	F7FIC1	F7FIC1_RAT	Cdh19	Cadherin 19	1	TGDIFAMQK	TGDIFAMQK	2	TGDIFAMQK2		2067.42	4285.87
A0A0G2K6T9	A0A0G2K6T9	A0A0G2K6T9_RAT	Pcdh1	Protocadherin 1	1	TGDIFTTETSIDR	TGDIFTTETSIDR	2	TGDIFTTETSIDR2	22425.6	24694.9	21150.3
O08628	O08628	PCOC1_RAT	Pcolce	Procollagen C-endopeptidase enhancer 1	1	TGDLDLPSPASGTSLK	TGDLDLPSPASGTSLK	2	TGDLDLPSPASGTSLK2	23275.7	19473.8	8182.64
D3ZHR2	D3ZHR2	ABCD1_RAT	Abcd1	ATP-binding cassette sub-family D member 1	1	TGDLEEAQAGPGSMVHSGVHIEGPLK	TGDLEEAQAGPGSMVHSGVHIEGPLK	4	TGDLEEAQAGPGSMVHSGVHIEGPLK4	6443.12	5941.71	
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	TGDLGDINAEQLPGR	TGDLGDINAEQLPGR	2	TGDLGDINAEQLPGR2	9837.15	9143.48	2587.59
E9PU02	E9PU02	E9PU02_RAT	Trappc9	Trafficking protein particle complex subunit 9	1	TGDLGHVK	TGDLGHVK	2	TGDLGHVK2	10666.1	25400.9	8150.97
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	TGDMVLK	TGDMVLK	1	TGDMVLK1	6554.59	9152.65	7889.1
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	TGDMVLK	TGDMVLK	2	TGDMVLK2	256909	310677	274061
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	TGDPGPELK	TGDPGPELK	2	TGDPGPELK2	282429	294308	279343
P37136	P37136	ACES_RAT	Ache	Acetylcholinesterase	1	TGDPNDPR	TGDPNDPR	2	TGDPNDPR2			40460
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	TGDSIVIASTGHR	TGDSIVIASTGHR	2	TGDSIVIASTGHR2	25257.9	27676.3	31427
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	TGDSIVIASTGHR	TGDSIVIASTGHR	3	TGDSIVIASTGHR3	113551	131540	125255
P51158	P51158	RAB28_RAT	Rab28	Ras-related protein Rab-28	1	TGDSVFLCFQK	TGDSVFLC(UniMod:4)FQK	2	TGDSVFLC(UniMod:4)FQK2	25935.3	38462.2	13508.9
Q99MZ8	Q99MZ8	LASP1_RAT	Lasp1	LIM and SH3 domain protein 1	1	TGDTGMLPANYVEAI	TGDTGMLPANYVEAI	2	TGDTGMLPANYVEAI2	26332.8	22342.3	23741.9
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	TGDVEDSTVLK	TGDVEDSTVLK	2	TGDVEDSTVLK2	89847.9	90920.9	80113.5
Q810F4	Q810F4	FAM3C_RAT	Fam3c	Protein FAM3C	1	TGDVIDTK	TGDVIDTK	2	TGDVIDTK2	41123.6	39299.3	48578.4
P08650	P08650	CO5_RAT	C5	Complement C5	1	TGEAAAEK	TGEAAAEK	2	TGEAAAEK2			7844.73
Q569A6	Q569A6	ERD21_RAT	Kdelr1	ER lumen protein-retaining receptor 1	1	TGEAETITSHYLFALGVYR	TGEAETITSHYLFALGVYR	3	TGEAETITSHYLFALGVYR3	4878.26	8774.47	8267.8
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	TGEAIVDAALSALR	TGEAIVDAALSALR	2	TGEAIVDAALSALR2	2.97052e+06	3.53555e+06	2.79775e+06
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	TGEAIVDAALSALR	TGEAIVDAALSALR	3	TGEAIVDAALSALR3	962675	1.00371e+06	878271
Q63009	Q63009;A0A0G2K9I8	ANM1_RAT	Prmt1	Protein arginine N-methyltransferase 1	0	TGEEIFGTIGMRPNAK	TGEEIFGTIGMRPNAK	3	TGEEIFGTIGMRPNAK3	30960.1	25036	28076.1
A1L1K3	A1L1K3	APC5_RAT	Anapc5	Anaphase-promoting complex subunit 5	1	TGEGAVSLVER	TGEGAVSLVER	2	TGEGAVSLVER2	14022.6	11514.7	11160.2
Q04970	Q04970	RASN_RAT	Nras	GTPase NRas	1	TGEGFLCVFAINNSK	TGEGFLC(UniMod:4)VFAINNSK	2	TGEGFLC(UniMod:4)VFAINNSK2	12345.3	21407.6	21981.9
P08644	P08644;P20171	RASK_RAT	Kras	GTPase KRas	0	TGEGFLCVFAINNTK	TGEGFLC(UniMod:4)VFAINNTK	2	TGEGFLC(UniMod:4)VFAINNTK2	21677	23781.4	24766.4
P08644	P08644;P20171	RASK_RAT	Kras	GTPase KRas	0	TGEGFLCVFAINNTK	TGEGFLC(UniMod:4)VFAINNTK	3	TGEGFLC(UniMod:4)VFAINNTK3			5044.05
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	TGEGGLLQVTLEGINLK	TGEGGLLQVTLEGINLK	2	TGEGGLLQVTLEGINLK2	5351.17	13548.3	13714.5
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	TGEILWR	TGEILWR	2	TGEILWR2	80617.3	78997.5	90186.7
Q9ES54	Q9ES54	NPL4_RAT	Nploc4	Nuclear protein localization protein 4 homolog	1	TGEITASSSK	TGEITASSSK	2	TGEITASSSK2	42574.5		24717
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	TGELEQEVVSR	TGELEQEVVSR	2	TGELEQEVVSR2	494286	525432	529601
P36372	P36372	TAP2_RAT	Tap2	Antigen peptide transporter 2	1	TGELNSR	TGELNSR	2	TGELNSR2			96105.7
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	TGEMTEGQIAR	TGEMTEGQIAR	2	TGEMTEGQIAR2	85013.6	86446.7	93646.1
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	TGENVEDAFLEAAK	TGENVEDAFLEAAK	2	TGENVEDAFLEAAK2	110784	88677.1	113870
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	TGENVEDAFLEAAK	TGENVEDAFLEAAK	3	TGENVEDAFLEAAK3	12060.1	9578.1	11611.6
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	TGENVEDAFLEAAKK	TGENVEDAFLEAAKK	2	TGENVEDAFLEAAKK2	4236.16	3521.73	3254.33
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	TGENVEDAFLEAAKK	TGENVEDAFLEAAKK	3	TGENVEDAFLEAAKK3	46490.8	53923.2	49345.7
Q811U3	Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	1	TGEPCVAELTEENFQR	TGEPC(UniMod:4)VAELTEENFQR	2	TGEPC(UniMod:4)VAELTEENFQR2	6899.89	14757.9	4706.88
A0A8I6GH74	A0A8I6GH74	A0A8I6GH74_RAT	Fam172a	Family with sequence similarity 172, member A	1	TGEPFVFNYR	TGEPFVFNYR	2	TGEPFVFNYR2	4156.16	4867.94	4513.39
Q64605	Q64605	PTPRS_RAT	Ptprs	Receptor-type tyrosine-protein phosphatase S	1	TGEQAPASAPR	TGEQAPASAPR	2	TGEQAPASAPR2	12306.6	10278.7	
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	TGETGVEETILEGHLGVTK	TGETGVEETILEGHLGVTK	3	TGETGVEETILEGHLGVTK3	32420.2	40366.4	33514.9
Q925S8	Q925S8	YMEL1_RAT	Yme1l1	ATP-dependent zinc metalloprotease YME1L1	1	TGFAEGFLK	TGFAEGFLK	2	TGFAEGFLK2	5501.93	4133.39	1608.97
F1MAA4	F1MAA4	F1MAA4_RAT	Atp13a2	ATPase cation transporting 13A2	1	TGFCTAK	TGFC(UniMod:4)TAK	2	TGFC(UniMod:4)TAK2	3136.84	6920.52	5840.86
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	TGFELLQGSVPLK	TGFELLQGSVPLK	2	TGFELLQGSVPLK2	1.58618e+06	1.69373e+06	1.57703e+06
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	TGFELLQGSVPLK	TGFELLQGSVPLK	3	TGFELLQGSVPLK3	14895.2	19203.4	15268.2
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	TGFFEFQAAK	TGFFEFQAAK	2	TGFFEFQAAK2	41524.8	51579.6	34421.4
P20650	P20650	PPM1A_RAT	Ppm1a	Protein phosphatase 1A	1	TGFLEIDEHMR	TGFLEIDEHMR	2	TGFLEIDEHMR2	3260.35	2951.73	
P20650	P20650	PPM1A_RAT	Ppm1a	Protein phosphatase 1A	1	TGFLEIDEHMR	TGFLEIDEHMR	3	TGFLEIDEHMR3	19745.3	6592.73	11492.9
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	TGFNTSQGK	TGFNTSQGK	2	TGFNTSQGK2		9796.28	
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	TGFPEEEGREDLTDAEPPK	TGFPEEEGREDLTDAEPPK	3	TGFPEEEGREDLTDAEPPK3	71848.2	72682.7	83163.4
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	TGFQAVTGK	TGFQAVTGK	2	TGFQAVTGK2	237453	234998	241434
O35987	O35987	NSF1C_RAT	Nsfl1c	NSFL1 cofactor p47	1	TGFSLDNGDLR	TGFSLDNGDLR	2	TGFSLDNGDLR2	101000	106333	102286
Q63663	Q63663	GBP2_RAT	Gbp2	Guanylate-binding protein 2	1	TGFSLGSTVQSHTK	TGFSLGSTVQSHTK	3	TGFSLGSTVQSHTK3	8631.26	14277.2	9206.7
Q5U2R9	Q5U2R9	Q5U2R9_RAT	Scfd2	Sec1 family domain containing 2	1	TGFSMFMK	TGFSMFMK	2	TGFSMFMK2	5564.62	3029.29	
D3ZGB8	D3ZGB8	D3ZGB8_RAT	Cilp	Cartilage intermediate layer protein	1	TGFSSNPR	TGFSSNPR	2	TGFSSNPR2	85944.7	86775.7	79453.6
Q63009	Q63009;A0A0G2K9I8	ANM1_RAT	Prmt1	Protein arginine N-methyltransferase 1	0	TGFSTSPESPYTHWK	TGFSTSPESPYTHWK	2	TGFSTSPESPYTHWK2	4266.18	4906.28	
Q63009	Q63009;A0A0G2K9I8	ANM1_RAT	Prmt1	Protein arginine N-methyltransferase 1	0	TGFSTSPESPYTHWK	TGFSTSPESPYTHWK	3	TGFSTSPESPYTHWK3	34513.3	24648.7	34991.6
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	TGFTPLHIAAHYENLNVAQLLLNR	TGFTPLHIAAHYENLNVAQLLLNR	4	TGFTPLHIAAHYENLNVAQLLLNR4	22056.7	12394	25552.8
A0A8I6AF82	A0A8I6AF82	A0A8I6AF82_RAT	ENSRNOG00000070725	Tubulin alpha chain	1	TGFVDWCPTGFK	TGFVDWC(UniMod:4)PTGFK	2	TGFVDWC(UniMod:4)PTGFK2	20057.6	24733.1	18484.4
B2RZ33	B2RZ33	B2RZ33_RAT	Nck1	Cytoplasmic protein	1	TGFVPSNYVER	TGFVPSNYVER	2	TGFVPSNYVER2	75062.5	46796	46177.4
Q3ZU82	Q3ZU82	GOGA5_RAT	Golga5	Golgin subfamily A member 5	1	TGGDASHPTEHASVPR	TGGDASHPTEHASVPR	4	TGGDASHPTEHASVPR4	5998.71	10816.1	6021.77
F1M3G7	F1M3G7	AKP13_RAT	Akap13	A-kinase anchor protein 13	1	TGGEVDLLSK	TGGEVDLLSK	2	TGGEVDLLSK2			21917.7
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	TGGLAFHSYFMEGIAPTLLQALK	TGGLAFHSYFMEGIAPTLLQALK	3	TGGLAFHSYFMEGIAPTLLQALK3	4904.09	3726.8	5123.11
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	TGGLAFHSYFMEGIAPTLLQALKK	TGGLAFHSYFMEGIAPTLLQALKK	4	TGGLAFHSYFMEGIAPTLLQALKK4	8630.1	66884.9	83592.4
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	TGGLEIDSDFGGFR	TGGLEIDSDFGGFR	2	TGGLEIDSDFGGFR2	70749.5	62793.4	67863.3
D3ZU63	D3ZU63	D3ZU63_RAT	Stard13	StAR-related lipid transfer domain containing 13	1	TGGLVISRPMLQQEPESFK	TGGLVISRPMLQQEPESFK	3	TGGLVISRPMLQQEPESFK3	4574.42	4745.29	8496.78
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	TGGLYSCDITSR	TGGLYSC(UniMod:4)DITSR	2	TGGLYSC(UniMod:4)DITSR2	806642	792862	862068
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	TGGMMYFGLAGVTK	TGGMMYFGLAGVTK	2	TGGMMYFGLAGVTK2	13781.2	21314.7	18138.8
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	TGGPCPEPVPSR	TGGPC(UniMod:4)PEPVPSR	2	TGGPC(UniMod:4)PEPVPSR2	29705.8	28570.4	29754.7
Q64620	Q64620	PPP6_RAT	Ppp6c	Serine/threonine-protein phosphatase 6 catalytic subunit	1	TGGQVPDTNYIFMGDFVDR	TGGQVPDTNYIFMGDFVDR	3	TGGQVPDTNYIFMGDFVDR3	19000.5	13651.1	15727
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	TGGSEVVVTNK	TGGSEVVVTNK	2	TGGSEVVVTNK2	82458	96780.9	95252.9
D4A6E6	D3ZEK5;A0A8I5ZN51;D4A6E6	D4A6E6_RAT	Hs6st1	Heparan-sulfate 6-O-sulfotransferase	0	TGGTTFGR	TGGTTFGR	2	TGGTTFGR2	5133.9	4479.67	13407.6
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	TGGTYGEDLGADYNLSQVCDGK	TGGTYGEDLGADYNLSQVC(UniMod:4)DGK	3	TGGTYGEDLGADYNLSQVC(UniMod:4)DGK3	7344.61		8157.34
A0A8I6AML4	A0A8I6AML4	A0A8I6AML4_RAT	Galc	Galactocerebrosidase	1	TGGVFIAGR	TGGVFIAGR	2	TGGVFIAGR2	9377.35	7610.27	9543.31
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	TGHGGPQFVADHPFLFFIMNNITR	TGHGGPQFVADHPFLFFIMNNITR	3	TGHGGPQFVADHPFLFFIMNNITR3	4107.21		
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	TGHGGPQFVADHPFLFFIMNNITR	TGHGGPQFVADHPFLFFIMNNITR	4	TGHGGPQFVADHPFLFFIMNNITR4	36348.5	37723.5	41076.9
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	TGHIYLGAVNR	TGHIYLGAVNR	2	TGHIYLGAVNR2	7554.71	9257.85	18217.3
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	TGHIYLGAVNR	TGHIYLGAVNR	3	TGHIYLGAVNR3	92686.9	111233	101785
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	TGHSLALGSLHR	TGHSLALGSLHR	3	TGHSLALGSLHR3	21024.6	21842.4	17212
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	TGHSLLHTLYGR	TGHSLLHTLYGR	2	TGHSLLHTLYGR2	5541.57	2201.67	
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	TGHSLLHTLYGR	TGHSLLHTLYGR	3	TGHSLLHTLYGR3	4327.13	20637.9	
P97573	Q9WVR3;P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	0	TGIANTLGNK	TGIANTLGNK	2	TGIANTLGNK2	93123.3	70433	88709.6
B4F7E7	B4F7E7	PALS1_RAT	Pals1	Protein PALS1	1	TGIDNPIFDTEEGIVLESPHYAVK	TGIDNPIFDTEEGIVLESPHYAVK	3	TGIDNPIFDTEEGIVLESPHYAVK3	6639.19	5773.04	6994.44
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	TGIEEASGAFVYLR	TGIEEASGAFVYLR	2	TGIEEASGAFVYLR2	5713.98	6680.68	11605.3
A0A8I6ASA9	A0A8I6ASA9	A0A8I6ASA9_RAT	Itsn2	Intersectin 2	1	TGIFPSNYVRPK	TGIFPSNYVRPK	3	TGIFPSNYVRPK3	18444.1	24455.4	31532.6
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	TGIGSGLSLSGIVHPELSR	TGIGSGLSLSGIVHPELSR	3	TGIGSGLSLSGIVHPELSR3	23014.7	17656.6	16889.7
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	TGIGVQLK	TGIGVQLK	2	TGIGVQLK2	92658.5	99549.3	82764.4
D3ZM39	D3ZM39	D3ZM39_RAT	Dsg1	Desmoglein 1	1	TGIITLR	TGIITLR	2	TGIITLR2	9269.12		12134.6
Q9QWE9	Q9QWE9	GGT5_RAT	Ggt5	Glutathione hydrolase 5 proenzyme	1	TGILLNNELLDLCWR	TGILLNNELLDLC(UniMod:4)WR	2	TGILLNNELLDLC(UniMod:4)WR2	35673	20465	15479.7
D3ZZB2	D3ZZB2	D3ZZB2_RAT	Pex1	Peroxisomal ATPase PEX1	1	TGILLYGPPGTGK	TGILLYGPPGTGK	2	TGILLYGPPGTGK2	4283.56	9136.68	7843.28
F7FHP0	F7FHP0	F7FHP0_RAT	Angptl3	Angiopoietin-like 3	1	TGIQEPTENSLYSK	TGIQEPTENSLYSK	2	TGIQEPTENSLYSK2	12986.7	8711.85	12058.1
F7FHP0	F7FHP0	F7FHP0_RAT	Angptl3	Angiopoietin-like 3	1	TGIQEPTENSLYSKPR	TGIQEPTENSLYSKPR	2	TGIQEPTENSLYSKPR2	5112.87	3447.73	4854.59
F7FHP0	F7FHP0	F7FHP0_RAT	Angptl3	Angiopoietin-like 3	1	TGIQEPTENSLYSKPR	TGIQEPTENSLYSKPR	3	TGIQEPTENSLYSKPR3	199662	178032	152919
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	TGISEGHTVYVVHDGFEGLAK	TGISEGHTVYVVHDGFEGLAK	3	TGISEGHTVYVVHDGFEGLAK3	5465.06	8875.01	5743.7
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	TGISEGHTVYVVHDGFEGLAK	TGISEGHTVYVVHDGFEGLAK	4	TGISEGHTVYVVHDGFEGLAK4	22174	14772.8	17168.7
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	TGISLNVPAPQPVCISEK	TGISLNVPAPQPVC(UniMod:4)ISEK	2	TGISLNVPAPQPVC(UniMod:4)ISEK2	15441.3	15391.1	15554.7
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	TGISLNVPAPQPVCISEK	TGISLNVPAPQPVC(UniMod:4)ISEK	3	TGISLNVPAPQPVC(UniMod:4)ISEK3	15410.8	8502.19	10365.9
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	TGIVNAWTASSYDSK	TGIVNAWTASSYDSK	2	TGIVNAWTASSYDSK2	3452.47	582.175	
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	TGIVNAWTASSYDSKPWIQVDFLR	TGIVNAWTASSYDSKPWIQVDFLR	3	TGIVNAWTASSYDSKPWIQVDFLR3		32911.4	23087.7
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	TGIVSGFGR	TGIVSGFGR	1	TGIVSGFGR1	9852.17	9404.78	9542.74
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	TGIVSGFGR	TGIVSGFGR	2	TGIVSGFGR2	166663	155673	159487
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	TGIVSGFGRTHEK	TGIVSGFGRTHEK	3	TGIVSGFGRTHEK3	17147	20661.4	20708.7
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	TGIVSGFGRTHEKGR	TGIVSGFGRTHEKGR	3	TGIVSGFGRTHEKGR3		20474.5	6885.91
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	TGIVSGFGRTHEKGR	TGIVSGFGRTHEKGR	4	TGIVSGFGRTHEKGR4	2985.89	35772.9	23094
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	TGIVVPCK	TGIVVPC(UniMod:4)K	2	TGIVVPC(UniMod:4)K2	8204.54	8525.6	17972.4
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	TGIWSGPAPYCK	TGIWSGPAPYC(UniMod:4)K	2	TGIWSGPAPYC(UniMod:4)K2	61940.5	63053.8	62232.8
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	TGKPFNPLLGETYELVR	TGKPFNPLLGETYELVR	2	TGKPFNPLLGETYELVR2	6746.06	4427.41	4794.63
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	TGKPFNPLLGETYELVR	TGKPFNPLLGETYELVR	3	TGKPFNPLLGETYELVR3	85504.1	94641	84461.3
Q62598	Q62598	DSPP_RAT	Dspp	Dentin sialophosphoprotein	1	TGLASDTSQNGDATLVQENEPQVAGSK	TGLASDTSQNGDATLVQENEPQVAGSK	3	TGLASDTSQNGDATLVQENEPQVAGSK3	167422	204210	183481
Q5BJL5	Q5BJL5	SBNO1_RAT	Sbno1	Protein strawberry notch homolog 1	1	TGLAVLELQNK	TGLAVLELQNK	2	TGLAVLELQNK2	2886.3	2606.91	4204.81
A0A8I5ZRK9	A0A8I5ZRK9	A0A8I5ZRK9_RAT	Scarf1	Scavenger receptor class F, member 1	1	TGLCHCDPGWWSPTCR	TGLC(UniMod:4)HC(UniMod:4)DPGWWSPTC(UniMod:4)R	3	TGLC(UniMod:4)HC(UniMod:4)DPGWWSPTC(UniMod:4)R3	111883	112774	117910
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	TGLCYLPEELAALQK	TGLC(UniMod:4)YLPEELAALQK	2	TGLC(UniMod:4)YLPEELAALQK2	378228	429061	419808
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	TGLCYLPEELAALQK	TGLC(UniMod:4)YLPEELAALQK	3	TGLC(UniMod:4)YLPEELAALQK3	73042.5	65688.9	69168.9
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TGLDSPTGFDSSDVTANSFTVHWVAPR	TGLDSPTGFDSSDVTANSFTVHWVAPR	3	TGLDSPTGFDSSDVTANSFTVHWVAPR3	793911	741202	676512
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TGLDSPTGFDSSDVTANSFTVHWVAPR	TGLDSPTGFDSSDVTANSFTVHWVAPR	4	TGLDSPTGFDSSDVTANSFTVHWVAPR4	1.1592e+06	1.56611e+06	1.43559e+06
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	TGLEELVLSEMNSPSR	TGLEELVLSEMNSPSR	2	TGLEELVLSEMNSPSR2	15681.7	13058.7	15075.1
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	TGLEELVLSEMNSPSR	TGLEELVLSEMNSPSR	3	TGLEELVLSEMNSPSR3	8670.88	10172	9123.92
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	TGLEMGDELLYVCVPGSVTGHR	TGLEMGDELLYVC(UniMod:4)VPGSVTGHR	3	TGLEMGDELLYVC(UniMod:4)VPGSVTGHR3	65486	77357.4	58335
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	TGLEQGNDAGYLAESEK	TGLEQGNDAGYLAESEK	2	TGLEQGNDAGYLAESEK2	59390.5	56029.5	65710.3
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	TGLEQGNDAGYLAESEK	TGLEQGNDAGYLAESEK	3	TGLEQGNDAGYLAESEK3	27350.4	32313.1	41379.7
D3Z9K9	D3Z9K9	D3Z9K9_RAT	Gdpd2	Glycerophosphodiester phosphodiesterase domain containing 2	1	TGLETAVLLTK	TGLETAVLLTK	2	TGLETAVLLTK2	125787	132734	131517
A0A0G2JST1	A0A0G2JST1	A0A0G2JST1_RAT	Adgrg6	Adhesion G protein-coupled receptor G6	1	TGLFQDVGSQR	TGLFQDVGSQR	2	TGLFQDVGSQR2	4905.83	5129.87	
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	TGLFTPDLAFEAIVK	TGLFTPDLAFEAIVK	2	TGLFTPDLAFEAIVK2	32234.1	30160	26510.8
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	TGLFTPDLAFEAIVKK	TGLFTPDLAFEAIVKK	3	TGLFTPDLAFEAIVKK3	4172.8	3586.03	8277.4
Q08877	Q08877	DYN3_RAT	Dnm3	Dynamin-3	1	TGLFTPDMAFEAIVK	TGLFTPDMAFEAIVK	2	TGLFTPDMAFEAIVK2	27152.2	26768	27078.6
A0A8I5ZSU2	A0A8I5ZSU2	A0A8I5ZSU2_RAT	Ccm2l	CCM2 like scaffold protein	1	TGLGVDPVPAGMDGSPGSSGR	TGLGVDPVPAGMDGSPGSSGR	2	TGLGVDPVPAGMDGSPGSSGR2	3241.78	6264.03	3895.06
Q3T1I2	Q3T1I2	C1QT6_RAT	C1qtnf6	Complement C1q tumor necrosis factor-related protein 6	1	TGLHSSENFLSLLFDR	TGLHSSENFLSLLFDR	3	TGLHSSENFLSLLFDR3	4972.14	3204.73	5804.35
Q6P686	Q6P686	OSTF1_RAT	Ostf1	Osteoclast-stimulating factor 1	1	TGLIPSNYVAEQAESIDNPLHEAAK	TGLIPSNYVAEQAESIDNPLHEAAK	3	TGLIPSNYVAEQAESIDNPLHEAAK3	802995	825156	862289
Q6P686	Q6P686	OSTF1_RAT	Ostf1	Osteoclast-stimulating factor 1	1	TGLIPSNYVAEQAESIDNPLHEAAKR	TGLIPSNYVAEQAESIDNPLHEAAKR	4	TGLIPSNYVAEQAESIDNPLHEAAKR4	7029.48	11506.9	21036.5
O88277	O88277	FAT2_RAT	Fat2	Protocadherin Fat 2	1	TGLITTTK	TGLITTTK	2	TGLITTTK2	6059.13		2687.02
Q8R508	Q8R508;A0A0G2K5L1	FAT3_RAT	Fat3	Protocadherin Fat 3	0	TGLITTTSR	TGLITTTSR	2	TGLITTTSR2	242345	240183	246693
D3Z9C0	D3Z9C0	D3Z9C0_RAT	Mios	Meiosis regulator for oocyte development	1	TGLLATLTR	TGLLATLTR	2	TGLLATLTR2	19202.9	11192.8	26800.1
D3ZKR8	D3ZKR8	D3ZKR8_RAT	Tmem167a	Protein kish	1	TGLLGIFWK	TGLLGIFWK	2	TGLLGIFWK2	56838.8	42774.3	50055.7
Q9WTV0	Q9WTV0	PREB_RAT	Preb	Prolactin regulatory element-binding protein	1	TGLLIAAGGGGAAK	TGLLIAAGGGGAAK	2	TGLLIAAGGGGAAK2	16878.7	16444.6	13503.2
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	TGLLQLSGPDK	TGLLQLSGPDK	2	TGLLQLSGPDK2	1.59141e+06	1.66809e+06	1.59588e+06
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	TGLLQSMEAEK	TGLLQSMEAEK	2	TGLLQSMEAEK2	1553.85		
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	TGLLQSMEAEKDK	TGLLQSMEAEKDK	2	TGLLQSMEAEKDK2	5712.64	3196.77	3822.72
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	TGLLQSMEAEKDK	TGLLQSMEAEKDK	3	TGLLQSMEAEKDK3	18627.6	22927.7	33254.4
Q63060	Q63060;A0A8I6AQ25	GLPK_RAT	Gk	Glycerol kinase	0	TGLPLSTYFSAVK	TGLPLSTYFSAVK	2	TGLPLSTYFSAVK2	82080.9	46934.8	61208.1
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	TGLPSTLLAHIWALCDTK	TGLPSTLLAHIWALC(UniMod:4)DTK	3	TGLPSTLLAHIWALC(UniMod:4)DTK3	45864.9	30033.3	43624.8
E9PSP1	E9PSP1	E9PSP1_RAT	Pltp	Phospholipid transfer protein	1	TGLQLSR	TGLQLSR	2	TGLQLSR2	1.06466e+06	1.09251e+06	1.06421e+06
E9PSP1	E9PSP1	E9PSP1_RAT	Pltp	Phospholipid transfer protein	1	TGLQLSRDPTGR	TGLQLSRDPTGR	3	TGLQLSRDPTGR3	16260.3	21493.6	13140.9
A0A8I5Y153	A0A8I5Y153	A0A8I5Y153_RAT	Llgl2	LLGL scribble cell polarity complex component 2	1	TGLQNMELAPVQR	TGLQNMELAPVQR	2	TGLQNMELAPVQR2	5026.84	5598.85	11137.4
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	TGLSNPDGLAVDWVGGNLYWCDK	TGLSNPDGLAVDWVGGNLYWC(UniMod:4)DK	3	TGLSNPDGLAVDWVGGNLYWC(UniMod:4)DK3	30126.2	34272.5	21581.5
Q62825	Q62825	EXOC3_RAT	Exoc3	Exocyst complex component 3	1	TGLSQLHNALNDVK	TGLSQLHNALNDVK	3	TGLSQLHNALNDVK3	22555.7	19484.7	15519.9
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	TGLVEFAR	TGLVEFAR	2	TGLVEFAR2	64130.6	54839.3	55639.4
Q9QZG1	Q9QZG1	S22AN_RAT	Slc22a23	Solute carrier family 22 member 23	1	TGLVQNVVSK	TGLVQNVVSK	2	TGLVQNVVSK2	31616.1	27881.3	40502.3
D3ZWA8	D3ZWA8	D3ZWA8_RAT	Appl1	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1	1	TGLVSSTWDR	TGLVSSTWDR	2	TGLVSSTWDR2	22017.4	26934.7	19033
B4F779	B4F779	DP13B_RAT	Appl2	DCC-interacting protein 13-beta	1	TGLVTTTWER	TGLVTTTWER	2	TGLVTTTWER2	8798.36	12808.6	10575
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	TGLVYDER	TGLVYDER	2	TGLVYDER2	117464	132646	120445
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	TGLYPSYK	TGLYPSYK	2	TGLYPSYK2	102155	90504.7	102845
Q62936	Q62936	DLG3_RAT	Dlg3	Disks large homolog 3	1	TGMIESNR	TGMIESNR	2	TGMIESNR2		2838.85	
P18298	P18298;A0A8I6G8F2	METK2_RAT	Mat2a	S-adenosylmethionine synthase isoform type-2	0	TGMILLAGEITSR	TGMILLAGEITSR	2	TGMILLAGEITSR2	25173		19268.7
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	TGMLEELQMEPEVVQGLFPCVDELSDIHTR	TGMLEELQMEPEVVQGLFPC(UniMod:4)VDELSDIHTR	4	TGMLEELQMEPEVVQGLFPC(UniMod:4)VDELSDIHTR4	23877.3	11992.8	8892.5
D4A164	D4A164	D4A164_RAT	Nebl	Nebulette	1	TGMLPANYIEFVN	TGMLPANYIEFVN	2	TGMLPANYIEFVN2	2956.11		4142.46
D4A0G7	D4A0G7	D4A0G7_RAT	Rab37	RAB37, member RAS oncogene family	1	TGMNVELAFLAIAK	TGMNVELAFLAIAK	2	TGMNVELAFLAIAK2	30353.5	31849.3	34523.4
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	TGNESGSNLSDSGSVK	TGNESGSNLSDSGSVK	2	TGNESGSNLSDSGSVK2	27342.7	18660.2	34126.7
B4F766	B4F766	DYM_RAT	Dym	Dymeclin	1	TGNLAALTK	TGNLAALTK	2	TGNLAALTK2	10986.9	6240.37	4517.61
Q9Z272	Q66H91;Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	0	TGNLETCLR	TGNLETC(UniMod:4)LR	2	TGNLETC(UniMod:4)LR2	13566.3	18328	14005.8
B2RZD5;D3ZSF9	B2RZD5;D3ZSF9	B2RZD5_RAT;D3ZSF9_RAT	Rpl22l1;Rpl22l2	Ribosomal protein L22 like 1	0	TGNLGNVVHIER	TGNLGNVVHIER	3	TGNLGNVVHIER3	6409.12	5996.74	9606.51
B2GV87	B2GV87	PTPRE_RAT	Ptpre	Receptor-type tyrosine-protein phosphatase epsilon	1	TGNLPANMK	TGNLPANMK	2	TGNLPANMK2	89084.6	79629.3	98491.8
Q63598	Q63598	PLST_RAT	Pls3	Plastin-3	1	TGNLTEEDK	TGNLTEEDK	2	TGNLTEEDK2	2969.24		
Q63598	Q63598	PLST_RAT	Pls3	Plastin-3	1	TGNLTEEDKHNNAK	TGNLTEEDKHNNAK	3	TGNLTEEDKHNNAK3			4952.57
Q63598	Q63598	PLST_RAT	Pls3	Plastin-3	1	TGNLTEEDKHNNAK	TGNLTEEDKHNNAK	4	TGNLTEEDKHNNAK4			5498.09
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	TGNPPFIK	TGNPPFIK	2	TGNPPFIK2	86660.7	99141.8	100289
Q9ES54	Q9ES54	NPL4_RAT	Nploc4	Nuclear protein localization protein 4 homolog	1	TGNQHFGYLYGR	TGNQHFGYLYGR	2	TGNQHFGYLYGR2	4082.84	1040.32	3219.97
Q9ES54	Q9ES54	NPL4_RAT	Nploc4	Nuclear protein localization protein 4 homolog	1	TGNQHFGYLYGR	TGNQHFGYLYGR	3	TGNQHFGYLYGR3	25132.6	17367.7	20433.4
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	TGNSLLSPK	TGNSLLSPK	2	TGNSLLSPK2	54707	74225	54822.1
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	TGNSSPASVEQEK	TGNSSPASVEQEK	2	TGNSSPASVEQEK2	3395.7		988.94
P15384	P15384	KCNA3_RAT	Kcna3	Potassium voltage-gated channel subfamily A member 3	1	TGNSTATCTTNNNPNSCVNIK	TGNSTATC(UniMod:4)TTNNNPNSC(UniMod:4)VNIK	3	TGNSTATC(UniMod:4)TTNNNPNSC(UniMod:4)VNIK3	23684.6	17240.5	36091.6
P15384	P15384	KCNA3_RAT	Kcna3	Potassium voltage-gated channel subfamily A member 3	1	TGNSTATCTTNNNPNSCVNIKK	TGNSTATC(UniMod:4)TTNNNPNSC(UniMod:4)VNIKK	3	TGNSTATC(UniMod:4)TTNNNPNSC(UniMod:4)VNIKK3	5030.66	9938.37	3657.21
Q5BK81	Q5BK81	PTGR2_RAT	Ptgr2	Prostaglandin reductase 2	1	TGNVAEQLR	TGNVAEQLR	2	TGNVAEQLR2	3879.78	3271.6	
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	TGNWSALPSCK	TGNWSALPSC(UniMod:4)K	2	TGNWSALPSC(UniMod:4)K2	13778.3	14670.2	
F1MAA4	F1MAA4	F1MAA4_RAT	Atp13a2	ATPase cation transporting 13A2	1	TGPALTLVR	TGPALTLVR	2	TGPALTLVR2	10082.8		
P16573	P16573	CEAM1_RAT	Ceacam1	Carcinoembryonic antigen-related cell adhesion molecule 1	1	TGPAYSGR	TGPAYSGR	2	TGPAYSGR2	30025.6	34854.6	51858.9
Q5U2R3	Q5U2R3	FRMD8_RAT	Frmd8	FERM domain-containing protein 8	1	TGPCEQGLLNAYR	TGPC(UniMod:4)EQGLLNAYR	2	TGPC(UniMod:4)EQGLLNAYR2	6750.81	19050.8	16449.8
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	TGPCFTVVSNQMCQGQLSGIVCTK	TGPC(UniMod:4)FTVVSNQMC(UniMod:4)QGQLSGIVC(UniMod:4)TK	3	TGPC(UniMod:4)FTVVSNQMC(UniMod:4)QGQLSGIVC(UniMod:4)TK3	6473.37	6381.14	8094.24
O35217	O35217	MINP1_RAT	Minpp1	Multiple inositol polyphosphate phosphatase 1	1	TGPEMQTVLK	TGPEMQTVLK	2	TGPEMQTVLK2	60891.7	56747.1	55551.2
O35217	O35217	MINP1_RAT	Minpp1	Multiple inositol polyphosphate phosphatase 1	1	TGPEMQTVLKK	TGPEMQTVLKK	3	TGPEMQTVLKK3	23181.6	29431	13012.6
A0A8I5ZPZ9	A0A8I5ZPZ9	A0A8I5ZPZ9_RAT	Ptpa	Serine/threonine-protein phosphatase 2A activator	1	TGPFAEHSNQLWNISAVPSWSK	TGPFAEHSNQLWNISAVPSWSK	3	TGPFAEHSNQLWNISAVPSWSK3	19304.3	16251.1	23607.4
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	TGPFCMDHEPGR	TGPFC(UniMod:4)MDHEPGR	2	TGPFC(UniMod:4)MDHEPGR2	2438.34		4684.01
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	TGPFCMDHEPGR	TGPFC(UniMod:4)MDHEPGR	3	TGPFC(UniMod:4)MDHEPGR3	58297.1	67522.9	52033.1
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	TGPFEDLKENLIR	TGPFEDLKENLIR	3	TGPFEDLKENLIR3	80408.8	89577.7	70769.6
P70583	P70583	DUT_RAT	Dut	Deoxyuridine 5'-triphosphate nucleotidohydrolase	1	TGPGACADPAVSVSK	TGPGAC(UniMod:4)ADPAVSVSK	2	TGPGAC(UniMod:4)ADPAVSVSK2	7531.36	5100.51	5025.42
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	TGPGEHLR	TGPGEHLR	1	TGPGEHLR1	4739.66		5443.54
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	TGPGEHLR	TGPGEHLR	2	TGPGEHLR2	431393		462681
Q9QWJ9	Q9QWJ9	NRP1_RAT	Nrp1	Neuropilin-1	1	TGPIQDHTGDGNFIYSQADENQK	TGPIQDHTGDGNFIYSQADENQK	3	TGPIQDHTGDGNFIYSQADENQK3	45770.8	33416.1	40965.5
Q499T5	Q499T5	Q499T5_RAT	Capn7	Calpain 7	1	TGPLLIELR	TGPLLIELR	2	TGPLLIELR2	9497.06	3780.72	7522.21
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TGPMKEINLSPDSTSVIVSGLMVATK	TGPMKEINLSPDSTSVIVSGLMVATK	3	TGPMKEINLSPDSTSVIVSGLMVATK3	39692	49468.9	59996.1
P62898	D4A5L9;P62898	CYC_RAT	Cycs	Cytochrome c, somatic	0	TGPNLHGLFGR	TGPNLHGLFGR	2	TGPNLHGLFGR2	58705.3	49869.6	51701.8
P62898	D4A5L9;P62898	CYC_RAT	Cycs	Cytochrome c, somatic	0	TGPNLHGLFGR	TGPNLHGLFGR	3	TGPNLHGLFGR3	1.06889e+06	1.09764e+06	1.16866e+06
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	TGPPSYAK	TGPPSYAK	2	TGPPSYAK2	71221.1	82074.1	74020.8
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	TGPPYPQTSLLSK	TGPPYPQTSLLSK	2	TGPPYPQTSLLSK2	114159	107754	109173
D4A544	D4A544	D4A544_RAT	Dennd6a	DENN domain containing 6A	1	TGPQLTSGIK	TGPQLTSGIK	2	TGPQLTSGIK2	9048.62	6832	9498.8
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	TGPQNGWNDPPALNR	TGPQNGWNDPPALNR	2	TGPQNGWNDPPALNR2	6717.07		2304.34
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	TGPSCNVPCSQGTDGFFCPR	TGPSC(UniMod:4)NVPC(UniMod:4)SQGTDGFFC(UniMod:4)PR	3	TGPSC(UniMod:4)NVPC(UniMod:4)SQGTDGFFC(UniMod:4)PR3	33601.1	37594.3	49545.9
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	TGPSGHNIR	TGPSGHNIR	2	TGPSGHNIR2			4736.94
Q68FS8	Q68FS8	Q68FS8_RAT	Rtca	RNA 3'-terminal-phosphate cyclase (ATP)	1	TGPVTLHTQTAIHFAEQLAK	TGPVTLHTQTAIHFAEQLAK	3	TGPVTLHTQTAIHFAEQLAK3	4649.15	5061.19	5539.21
Q68FS8	Q68FS8	Q68FS8_RAT	Rtca	RNA 3'-terminal-phosphate cyclase (ATP)	1	TGPVTLHTQTAIHFAEQLAK	TGPVTLHTQTAIHFAEQLAK	4	TGPVTLHTQTAIHFAEQLAK4	7161.65	6165.83	8405.58
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	TGQAAELGGLLK	TGQAAELGGLLK	2	TGQAAELGGLLK2	162721	180212	187702
P62898	D4A5L9;P62898	CYC_RAT	Cycs	Cytochrome c, somatic	0	TGQAAGFSYTDANK	TGQAAGFSYTDANK	2	TGQAAGFSYTDANK2	366153	375625	371534
P62898	D4A5L9;P62898	CYC_RAT	Cycs	Cytochrome c, somatic	0	TGQAAGFSYTDANKNK	TGQAAGFSYTDANKNK	3	TGQAAGFSYTDANKNK3	3430.63		
P16617	P16617	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	1	TGQATVASGIPAGWMGLDCGTESSK	TGQATVASGIPAGWMGLDC(UniMod:4)GTESSK	3	TGQATVASGIPAGWMGLDC(UniMod:4)GTESSK3	36687.1	44655.8	29333.1
P16617	P16617	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	1	TGQATVASGIPAGWMGLDCGTESSKK	TGQATVASGIPAGWMGLDC(UniMod:4)GTESSKK	3	TGQATVASGIPAGWMGLDC(UniMod:4)GTESSKK3	19788.7	15564.2	26300.6
Q9EQH5	Q9EQH5	CTBP2_RAT	Ctbp2	C-terminal-binding protein 2	1	TGQAVAVR	TGQAVAVR	2	TGQAVAVR2		6781.51	
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	TGQCECQPGITGQHCER	TGQC(UniMod:4)EC(UniMod:4)QPGITGQHC(UniMod:4)ER	3	TGQC(UniMod:4)EC(UniMod:4)QPGITGQHC(UniMod:4)ER3	105042	102771	144740
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	TGQCECRPNVQGQR	TGQC(UniMod:4)EC(UniMod:4)RPNVQGQR	3	TGQC(UniMod:4)EC(UniMod:4)RPNVQGQR3			1871.61
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	TGQCICPPNTIGEK	TGQC(UniMod:4)IC(UniMod:4)PPNTIGEK	2	TGQC(UniMod:4)IC(UniMod:4)PPNTIGEK2	18154.8	19305.3	30319.1
Q5M7W6	Q5M7W6	F234A_RAT	Fam234a	Protein FAM234A	1	TGQDLLLVSSEDCK	TGQDLLLVSSEDC(UniMod:4)K	2	TGQDLLLVSSEDC(UniMod:4)K2	3800.46	7365.9	3363.77
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	TGQDMIENDHYASDAVAAR	TGQDMIENDHYASDAVAAR	3	TGQDMIENDHYASDAVAAR3	11539.7	17669.3	18539.2
Q6Q0N1	Q6Q0N1	CNDP2_RAT	Cndp2	Cytosolic non-specific dipeptidase	1	TGQEIPVNLR	TGQEIPVNLR	2	TGQEIPVNLR2	41928.2	26185.3	48739.9
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	TGQEIPYTFEDR	TGQEIPYTFEDR	2	TGQEIPYTFEDR2	55235.4	62352.9	60000.2
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	TGQEVVFVAEPDNK	TGQEVVFVAEPDNK	2	TGQEVVFVAEPDNK2	170358	155342	148577
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	TGQEVVFVAEPDNK	TGQEVVFVAEPDNK	3	TGQEVVFVAEPDNK3	8202.29	7508.96	22053.5
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	TGQEVVFVAEPDNKNVYK	TGQEVVFVAEPDNKNVYK	3	TGQEVVFVAEPDNKNVYK3	5490.93	8226.83	8016.26
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	TGQEYRPGNPPTAAVQTVSTK	TGQEYRPGNPPTAAVQTVSTK	3	TGQEYRPGNPPTAAVQTVSTK3	76267	79936.9	93922.3
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	TGQFCLPVSLEKPPQAYSVLSPEVPLPGMK	TGQFC(UniMod:4)LPVSLEKPPQAYSVLSPEVPLPGMK	4	TGQFC(UniMod:4)LPVSLEKPPQAYSVLSPEVPLPGMK4		5584.25	
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	TGQGLGASVLSWNDVIVACAPWQHWNVLEK	TGQGLGASVLSWNDVIVAC(UniMod:4)APWQHWNVLEK	4	TGQGLGASVLSWNDVIVAC(UniMod:4)APWQHWNVLEK4	92753	89546.2	91965.2
F1MA46	F1MA46	F1MA46_RAT	Pcdh12	Protocadherin 12	1	TGQIVLLQPLDYEK	TGQIVLLQPLDYEK	2	TGQIVLLQPLDYEK2	43287.2	32461.4	24355.3
F1MA46	F1MA46	F1MA46_RAT	Pcdh12	Protocadherin 12	1	TGQIVLLQPLDYEKNPAYEVDVQAR	TGQIVLLQPLDYEKNPAYEVDVQAR	3	TGQIVLLQPLDYEKNPAYEVDVQAR3	94155.4	87197.4	82231.6
A0A0G2JT44	A0A0G2JT44	A0A0G2JT44_RAT	Tmc6	Transmembrane channel-like protein	1	TGQKPEFDIAR	TGQKPEFDIAR	3	TGQKPEFDIAR3	49388.9	41327.4	40624.1
F1LP90	A0A0G2K490;A0A8I5ZLV4;F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	0	TGQLAAIK	TGQLAAIK	1	TGQLAAIK1	18043.4	13087.6	8459.78
F1LP90	A0A0G2K490;A0A8I5ZLV4;F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	0	TGQLAAIK	TGQLAAIK	2	TGQLAAIK2	426976	469715	443634
Q9Z1L0	Q9Z1L0	PK3CB_RAT	Pik3cb	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform	1	TGQLFHIDFGHILGNFK	TGQLFHIDFGHILGNFK	3	TGQLFHIDFGHILGNFK3	9545.73		
Q9Z1L0	Q9Z1L0	PK3CB_RAT	Pik3cb	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform	1	TGQLFHIDFGHILGNFK	TGQLFHIDFGHILGNFK	4	TGQLFHIDFGHILGNFK4	7203.18	4446.81	
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	TGQLNLIEAACYPR	TGQLNLIEAAC(UniMod:4)YPR	2	TGQLNLIEAAC(UniMod:4)YPR2	2419.02	5782.87	
Q5RKI8	Q5RKI8	MITOS_RAT	Abcb8	Mitochondrial potassium channel ATP-binding subunit	1	TGQLVSR	TGQLVSR	2	TGQLVSR2		2984.68	3956.99
D3ZU63	D3ZU63	D3ZU63_RAT	Stard13	StAR-related lipid transfer domain containing 13	1	TGQPLPQSIQQALR	TGQPLPQSIQQALR	2	TGQPLPQSIQQALR2	2244.85	4239.86	3099.61
O88797	O88797	DAB2_RAT	Dab2	Disabled homolog 2	1	TGQQAEPLVVDLK	TGQQAEPLVVDLK	2	TGQQAEPLVVDLK2	11105.4		
A0A8I6AGS4	A0A8I6AGS4	A0A8I6AGS4_RAT	Abi3bp	ABI family member 3 binding protein	1	TGQQLTSDQLPTK	TGQQLTSDQLPTK	2	TGQQLTSDQLPTK2	30761.6	42791.4	29492.9
A0A096MKB0	A0A096MKB0	A0A096MKB0_RAT	Rab24	Max dimerization protein 3	1	TGQSVDELFQK	TGQSVDELFQK	2	TGQSVDELFQK2	6952.15	3116.18	3252.21
A0A8I5ZTW6	A0A8I5ZTW6	A0A8I5ZTW6_RAT	Gopc	Golgi associated PDZ and coiled-coil motif containing	1	TGQSVDSGAIK	TGQSVDSGAIK	2	TGQSVDSGAIK2	31998.4	22137.5	25793.3
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	TGQYSGIYGCAK	TGQYSGIYGC(UniMod:4)AK	2	TGQYSGIYGC(UniMod:4)AK2	261043	249004	247904
P55280	P55280	CADH6_RAT	Cdh6	Cadherin-6	1	TGRPVEPESEFIIK	TGRPVEPESEFIIK	3	TGRPVEPESEFIIK3	58636.6	41240	48717.9
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	TGSEIHSDFYDIVLVAAPLNR	TGSEIHSDFYDIVLVAAPLNR	3	TGSEIHSDFYDIVLVAAPLNR3	78067.6	87527.8	78425.5
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	TGSESSIDR	TGSESSIDR	2	TGSESSIDR2	33899.8		30620.4
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	TGSESSVDR	TGSESSVDR	2	TGSESSVDR2			18954.4
A0A8I5ZU41	A0A8I5ZU41	A0A8I5ZU41_RAT	Amy1	Alpha-amylase	1	TGSGGIENYNDAAQVR	TGSGGIENYNDAAQVR	2	TGSGGIENYNDAAQVR2	3292.64	6150.71	7805.37
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	TGSHAEPLAR	TGSHAEPLAR	2	TGSHAEPLAR2	16382.6	25896.1	22185.9
Q63372	Q63372	NRX1A_RAT	Nrxn1	Neurexin-1	1	TGSISFDFR	TGSISFDFR	2	TGSISFDFR2	16806.7	9126.01	11403.7
A0A8I5ZQQ3	A0A8I5ZQQ3	A0A8I5ZQQ3_RAT	Pdpr	Pyruvate dehydrogenase phosphatase regulatory subunit	1	TGSISLAQTQDR	TGSISLAQTQDR	2	TGSISLAQTQDR2	7241	5885.81	4486.14
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	TGSLEAAQALQNLALMRPELVIPPVLER	TGSLEAAQALQNLALMRPELVIPPVLER	4	TGSLEAAQALQNLALMRPELVIPPVLER4	5118.01	3178.34	3129.33
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	TGSLEEMTQR	TGSLEEMTQR	2	TGSLEEMTQR2	34415.4	38347.9	32525.8
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	TGSPGSPSAGGVQSTAK	TGSPGSPSAGGVQSTAK	2	TGSPGSPSAGGVQSTAK2	73136.7	54820.6	49519.6
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	TGSPIAHISPHR	TGSPIAHISPHR	3	TGSPIAHISPHR3	11861.8	6903.76	
P62859	A0A8I6APW3;P62859;A0A0A0MY14	RS28_RAT	Rps28	Small ribosomal subunit protein eS28	0	TGSQGQCTQVR	TGSQGQC(UniMod:4)TQVR	2	TGSQGQC(UniMod:4)TQVR2			7772.46
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	TGSSFDLGDK	TGSSFDLGDK	2	TGSSFDLGDK2	47433.5	49227.5	45904.3
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	TGSSGALGPSER	TGSSGALGPSER	2	TGSSGALGPSER2	111941	115235	89232.7
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	TGSSQGKLPGDES	TGSSQGKLPGDES	2	TGSSQGKLPGDES2	5734.99	13666.1	15176.5
A0A0G2K6R0	A0A0G2K6R0	A0A0G2K6R0_RAT	Tnrc6b	Trinucleotide repeat containing adaptor 6B	1	TGSVGSWGAAR	TGSVGSWGAAR	2	TGSVGSWGAAR2	12430.8	14278.3	10583.5
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	TGSYGALAEITASK	TGSYGALAEITASK	2	TGSYGALAEITASK2	85593.7	99630.5	115978
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	TGSYGALAEITASK	TGSYGALAEITASK	3	TGSYGALAEITASK3		3494.97	4662.06
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	TGTAEMSSILEER	TGTAEMSSILEER	2	TGTAEMSSILEER2	717829	719808	868705
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	TGTALASLPLSLQGK	TGTALASLPLSLQGK	2	TGTALASLPLSLQGK2	11069.3	4079.72	12565.9
M0RAX2	M0RAX2	M0RAX2_RAT	Ndufs6l1	NADH dehydrogenase (ubiquinone) Fe-S protein 6	1	TGTCGYCGLQFK	TGTC(UniMod:4)GYC(UniMod:4)GLQFK	2	TGTC(UniMod:4)GYC(UniMod:4)GLQFK2	27584.3	22033.2	24813.7
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	TGTFIAIDR	TGTFIAIDR	2	TGTFIAIDR2	440743	399394	474873
Q62797	Q62797	Q62797_RAT	Ptpro	protein-tyrosine-phosphatase	1	TGTFIALDR	TGTFIALDR	2	TGTFIALDR2	440743	399394	474873
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	TGTFIVIDILIDIIR	TGTFIVIDILIDIIR	2	TGTFIVIDILIDIIR2	9153.75		
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	TGTFIVIDILIDIIREK	TGTFIVIDILIDIIREK	3	TGTFIVIDILIDIIREK3			4355.2
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	TGTFSPQR	TGTFSPQR	2	TGTFSPQR2	29830.3	21410.1	14815.9
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	TGTFVVIDAMLDMMHSER	TGTFVVIDAMLDMMHSER	3	TGTFVVIDAMLDMMHSER3	7808.16	8185.82	8144.32
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	TGTGDVATCDSPR	TGTGDVATC(UniMod:4)DSPR	2	TGTGDVATC(UniMod:4)DSPR2	118205	143015	129209
M0R3L8	M0R3L8	M0R3L8_RAT	Gba	Glucosylceramidase	1	TGTGLLLTLQPEEK	TGTGLLLTLQPEEK	2	TGTGLLLTLQPEEK2	41805.4	26589.4	38460.4
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	TGTHQISTDSQESSSR	TGTHQISTDSQESSSR	2	TGTHQISTDSQESSSR2			7948.14
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	TGTHQISTDSQESSSR	TGTHQISTDSQESSSR	3	TGTHQISTDSQESSSR3			7070.36
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	TGTITLQAPSEANR	TGTITLQAPSEANR	2	TGTITLQAPSEANR2	32132.7	31166.4	37282
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	TGTITLQAPSEANRR	TGTITLQAPSEANRR	3	TGTITLQAPSEANRR3	24475.7	35234.9	34072.1
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	TGTITSPDYPNPYPK	TGTITSPDYPNPYPK	2	TGTITSPDYPNPYPK2	4.72001e+06	4.87539e+06	5.29088e+06
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	TGTITSPDYPNPYPK	TGTITSPDYPNPYPK	3	TGTITSPDYPNPYPK3	177898	193586	165735
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	TGTITTFEHAHNMR	TGTITTFEHAHNMR	3	TGTITTFEHAHNMR3	85323.9	54393	68403.1
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	TGTITTFEHAHNMR	TGTITTFEHAHNMR	4	TGTITTFEHAHNMR4	60250.4	57522	43603.7
P20291	P20291	AL5AP_RAT	Alox5ap	Arachidonate 5-lipoxygenase-activating protein	1	TGTLAFER	TGTLAFER	2	TGTLAFER2	135849	136661	129198
D3ZGC2	D3ZGC2	D3ZGC2_RAT	Arid3b	AT-rich interactive domain-containing protein 3	1	TGTLEQLR	TGTLEQLR	2	TGTLEQLR2	22298.6	24454.9	21734.9
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	TGTLHEACEQLLK	TGTLHEAC(UniMod:4)EQLLK	3	TGTLHEAC(UniMod:4)EQLLK3	14801.2	11460.8	15295.6
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	TGTLTCNVMQFK	TGTLTC(UniMod:4)NVMQFK	2	TGTLTC(UniMod:4)NVMQFK2	25125.4	32517.1	19697.4
F1MAA4	F1MAA4	F1MAA4_RAT	Atp13a2	ATPase cation transporting 13A2	1	TGTLTEDGLDIMGVVPLK	TGTLTEDGLDIMGVVPLK	2	TGTLTEDGLDIMGVVPLK2		2876.23	6586.2
A0A8I6A6I4	A0A8I6A6I4	A0A8I6A6I4_RAT	Atp11b	Phospholipid-transporting ATPase	1	TGTLTENEMQFR	TGTLTENEMQFR	2	TGTLTENEMQFR2	7971.49	16722.6	8852.18
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	TGTLTENNMAFK	TGTLTENNMAFK	2	TGTLTENNMAFK2	54013	46465.5	51235.7
A0A8I5ZV31	A0A8I5ZV31	A0A8I5ZV31_RAT	Atp11c	Phospholipid-transporting ATPase	1	TGTLTENSMEFIECCIDGHK	TGTLTENSMEFIEC(UniMod:4)C(UniMod:4)IDGHK	3	TGTLTENSMEFIEC(UniMod:4)C(UniMod:4)IDGHK3		6869.04	3974.73
P11505	Q64542;P11505	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	0	TGTLTMNR	TGTLTMNR	2	TGTLTMNR2	50887.4	50381.4	46913.7
D4ABB8	D4ABB8;A0A8I6GI47	ATP9B_RAT	Atp9b	Probable phospholipid-transporting ATPase IIB	0	TGTLTQNEMVFK	TGTLTQNEMVFK	2	TGTLTQNEMVFK2	21711.7	29118.9	47345.2
P06685	P54708;P09626;Q64541;P06687;P06685;P06686	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	0	TGTLTQNR	TGTLTQNR	2	TGTLTQNR2	106538		159854
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	TGTLTSDSLVVR	TGTLTSDSLVVR	2	TGTLTSDSLVVR2	25581	34406.9	22098.9
P11507	P18596;P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	0	TGTLTTNQMSVCR	TGTLTTNQMSVC(UniMod:4)R	2	TGTLTTNQMSVC(UniMod:4)R2	1.23604e+06	1.20723e+06	1.31161e+06
P11507	P18596;P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	0	TGTLTTNQMSVCR	TGTLTTNQMSVC(UniMod:4)R	3	TGTLTTNQMSVC(UniMod:4)R3	12153.1	9345.05	6579.07
P04638	P04638	APOA2_RAT	Apoa2	Apolipoprotein A-II	1	TGTNLMDFLSR	TGTNLMDFLSR	2	TGTNLMDFLSR2	1.01548e+07	1.21283e+07	1.24658e+07
P04638	P04638	APOA2_RAT	Apoa2	Apolipoprotein A-II	1	TGTNLMDFLSR	TGTNLMDFLSR	3	TGTNLMDFLSR3	9375.08	11937.9	15280
D4A0G7	D4A0G7	D4A0G7_RAT	Rab37	RAB37, member RAS oncogene family	1	TGTPGAATAGDGEAPER	TGTPGAATAGDGEAPER	2	TGTPGAATAGDGEAPER2	247943	236550	247122
D4A0G7	D4A0G7	D4A0G7_RAT	Rab37	RAB37, member RAS oncogene family	1	TGTPGAATAGDGEAPER	TGTPGAATAGDGEAPER	3	TGTPGAATAGDGEAPER3	3653.77	6366.66	6353.83
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	TGTPSDPR	TGTPSDPR	2	TGTPSDPR2			15376.6
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	TGTPTRPCPPPPGK	TGTPTRPC(UniMod:4)PPPPGK	3	TGTPTRPC(UniMod:4)PPPPGK3	55691.1	56375.8	70973.6
A0A8I6A6H8	A0A8I6A6H8;A0A8I5ZQA7	A0A8I6A6H8_RAT	Serpinb6a	Serpin family B member 6A	0	TGTQYLLK	TGTQYLLK	1	TGTQYLLK1	6939.64	3718.58	4848.99
A0A8I6A6H8	A0A8I6A6H8;A0A8I5ZQA7	A0A8I6A6H8_RAT	Serpinb6a	Serpin family B member 6A	0	TGTQYLLK	TGTQYLLK	2	TGTQYLLK2	132680	127270	117127
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	TGTTVPESIHSFIGDGLVKPEALNK	TGTTVPESIHSFIGDGLVKPEALNK	4	TGTTVPESIHSFIGDGLVKPEALNK4	11886.8	5898.21	9241.08
B1WC91	B1WC91	B1WC91_RAT	C1qtnf3	C1q and TNF related 3	1	TGTVDNNTSTDLK	TGTVDNNTSTDLK	2	TGTVDNNTSTDLK2	22576.3	39257.6	27299.1
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	TGTVPLEVR	TGTVPLEVR	2	TGTVPLEVR2	73946.1	83419.3	55449.7
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	TGTVQVLK	TGTVQVLK	2	TGTVQVLK2	21359	21462	13369.1
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	TGTVVALEVAHFSNGGNTEDLSR	TGTVVALEVAHFSNGGNTEDLSR	3	TGTVVALEVAHFSNGGNTEDLSR3	28272.7	23153.2	33929.3
Q6AXM6	Q6AXM6	Q6AXM6_RAT	Icam2	Intercellular adhesion molecule 2	1	TGTYGVLAAWR	TGTYGVLAAWR	2	TGTYGVLAAWR2	31399.6	17185.2	33097.6
P17077	D3ZA49;A0A0G2JXD0;A0A8I6AHN0;P17077;M0R5Y8	RL9_RAT	Rpl9	Large ribosomal subunit protein uL6	0	TGVACSVSQAQK	TGVAC(UniMod:4)SVSQAQK	2	TGVAC(UniMod:4)SVSQAQK2	5187.65	6796.99	10282.5
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	TGVAINKPAEFTVDAK	TGVAINKPAEFTVDAK	2	TGVAINKPAEFTVDAK2	406125	402138	440992
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	TGVAINKPAEFTVDAK	TGVAINKPAEFTVDAK	3	TGVAINKPAEFTVDAK3	6.96689e+06	7.51706e+06	8.26778e+06
D3ZKE1	D3ZKE1	D3ZKE1_RAT	Uvrag	UV radiation resistance associated	1	TGVDLGNSVSGDHR	TGVDLGNSVSGDHR	3	TGVDLGNSVSGDHR3	5367.86	7244.04	3638.52
D4ACC1	D4ACC1	D4ACC1_RAT	Dapp1	Dual adaptor of phosphotyrosine and 3-phosphoinositides 1	1	TGVEADEWIK	TGVEADEWIK	2	TGVEADEWIK2	20310.6	19967.5	24153.4
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	TGVELGK	TGVELGK	1	TGVELGK1	4864.08	1747.15	
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	TGVELGKPTHFTVNAK	TGVELGKPTHFTVNAK	2	TGVELGKPTHFTVNAK2	131320	97392.5	102047
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	TGVELGKPTHFTVNAK	TGVELGKPTHFTVNAK	3	TGVELGKPTHFTVNAK3	2.72129e+06	2.63719e+06	2.4981e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	TGVELGKPTHFTVNAK	TGVELGKPTHFTVNAK	4	TGVELGKPTHFTVNAK4	3.06008e+06	3.25841e+06	3.66252e+06
Q5FVI3	Q5FVI3	LRC57_RAT	Lrrc57	Leucine-rich repeat-containing protein 57	1	TGVFQLK	TGVFQLK	2	TGVFQLK2	33109.6	18392.9	20365.6
Q9Z244	Q9Z244	GMPR1_RAT	Gmpr	GMP reductase 1	1	TGVGYPQLSAVIECADSAHGLK	TGVGYPQLSAVIEC(UniMod:4)ADSAHGLK	3	TGVGYPQLSAVIEC(UniMod:4)ADSAHGLK3	101981	83398.5	84252
P62890	P62890;M0RD99	RL30_RAT	Rpl30	Large ribosomal subunit protein eL30	0	TGVHHYSGNNIELGTACGK	TGVHHYSGNNIELGTAC(UniMod:4)GK	3	TGVHHYSGNNIELGTAC(UniMod:4)GK3	46277.9	4150.47	9323.33
P62890	P62890;M0RD99	RL30_RAT	Rpl30	Large ribosomal subunit protein eL30	0	TGVHHYSGNNIELGTACGK	TGVHHYSGNNIELGTAC(UniMod:4)GK	4	TGVHHYSGNNIELGTAC(UniMod:4)GK4	104002	37995.6	44594.1
O88797	O88797	DAB2_RAT	Dab2	Disabled homolog 2	1	TGVIEHEHPVNK	TGVIEHEHPVNK	3	TGVIEHEHPVNK3	3336.61		1477.2
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	TGVIGVQPEEVTAAAK	TGVIGVQPEEVTAAAK	2	TGVIGVQPEEVTAAAK2	22233.9	10566.4	17795.6
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	TGVIQDTWHK	TGVIQDTWHK	2	TGVIQDTWHK2	21954.5	15941.8	20342.8
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	TGVIQDTWHK	TGVIQDTWHK	3	TGVIQDTWHK3	93981	65149.9	71290.7
D3ZJR7	D3ZJR7	D3ZJR7_RAT	Dsc2	Desmocollin 2	1	TGVITTTSTQLDR	TGVITTTSTQLDR	2	TGVITTTSTQLDR2	120889	98580.2	141344
D3ZJR7	D3ZJR7	D3ZJR7_RAT	Dsc2	Desmocollin 2	1	TGVITTTSTQLDRELIDK	TGVITTTSTQLDRELIDK	3	TGVITTTSTQLDRELIDK3	26853.5	32689.4	45582.2
Q8K4Y7	Q8K4Y7	CANT1_RAT	Cant1	Soluble calcium-activated nucleotidase 1	1	TGVIYQIEGTK	TGVIYQIEGTK	2	TGVIYQIEGTK2	50716.6	45678.2	39502
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	TGVKPDAPDQEPEGLTLLVPDIQR	TGVKPDAPDQEPEGLTLLVPDIQR	3	TGVKPDAPDQEPEGLTLLVPDIQR3	37696.6	28830.6	28843.7
A0A8I6GJC5	A0A8I6GJC5	A0A8I6GJC5_RAT	Reps1	RALBP1 associated Eps domain containing 1	1	TGVLAAVLASQPSIPR	TGVLAAVLASQPSIPR	2	TGVLAAVLASQPSIPR2	8711.68	9228.5	4908.08
A0A8I6GJC5	A0A8I6GJC5	A0A8I6GJC5_RAT	Reps1	RALBP1 associated Eps domain containing 1	1	TGVLAAVLASQPSIPR	TGVLAAVLASQPSIPR	3	TGVLAAVLASQPSIPR3	16310.6	23354.3	22780.1
Q63862	Q63862	MYH11_RAT	Myh11	Myosin-11	1	TGVLAHLEEER	TGVLAHLEEER	2	TGVLAHLEEER2	8307.82	4837.43	6158.81
Q63862	Q63862	MYH11_RAT	Myh11	Myosin-11	1	TGVLAHLEEERDLK	TGVLAHLEEERDLK	3	TGVLAHLEEERDLK3		6015.82	
A0A8I6GDA1	A0A8I6GDA1	A0A8I6GDA1_RAT	Arhgap21	Rho GTPase activating protein 21	1	TGVLPGDVSDSATSDSTK	TGVLPGDVSDSATSDSTK	2	TGVLPGDVSDSATSDSTK2	31155.8	40431.8	36322.3
P12928	P12928	KPYR_RAT	Pklr	Pyruvate kinase PKLR	1	TGVLQGGPESEVEIVK	TGVLQGGPESEVEIVK	2	TGVLQGGPESEVEIVK2	12994.7	15596.6	11234.8
A0A8I6ASK1	A0A8I6ASK1	A0A8I6ASK1_RAT	P4ha2	procollagen-proline 4-dioxygenase	1	TGVLTVASYR	TGVLTVASYR	2	TGVLTVASYR2	81123.5	69699.6	95039.1
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	TGVPFLQVIPCSQR	TGVPFLQVIPC(UniMod:4)SQR	2	TGVPFLQVIPC(UniMod:4)SQR2	27542.7	34638.8	10896.8
P97881	P97881	MUC13_RAT	Muc13	Mucin-13	1	TGVPSQTSNPYANHR	TGVPSQTSNPYANHR	3	TGVPSQTSNPYANHR3	10194.7	11671	11924.5
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	TGVQFTTK	TGVQFTTK	2	TGVQFTTK2	42960.8	39622.2	47369.1
A0A8I6ALT5	A0A8I6ALT5	A0A8I6ALT5_RAT	Dok2	Docking protein 2	1	TGVSALELWGGPEPGTQLYDWPYR	TGVSALELWGGPEPGTQLYDWPYR	3	TGVSALELWGGPEPGTQLYDWPYR3	10583	6121.53	8990.39
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	TGVSQLSTALK	TGVSQLSTALK	2	TGVSQLSTALK2	5507.53	6481.98	3091.01
B2GV39	B2GV39	B2GV39_RAT	Mgat4b	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B	1	TGVSVVMGIPSVR	TGVSVVMGIPSVR	2	TGVSVVMGIPSVR2	5624.07	6662.33	2130.99
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	TGVTCQK	TGVTC(UniMod:4)QK	1	TGVTC(UniMod:4)QK1			47764
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	TGVTCQK	TGVTC(UniMod:4)QK	2	TGVTC(UniMod:4)QK2			873186
D3ZG58	D3ZG58	D3ZG58_RAT	Zwilch	Protein zwilch	1	TGVTEWLEPLETK	TGVTEWLEPLETK	2	TGVTEWLEPLETK2	3899.81	5068.83	4839.27
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	TGVVLVAAAGNFR	TGVVLVAAAGNFR	2	TGVVLVAAAGNFR2	142639	104440	88598
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	TGVVLVAAAGNFR	TGVVLVAAAGNFR	3	TGVVLVAAAGNFR3	23546.4	10346.9	11958.9
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	TGVVSSK	TGVVSSK	1	TGVVSSK1			8610.56
P35565	P35565	CALX_RAT	Canx	Calnexin	1	TGVYEEK	TGVYEEK	1	TGVYEEK1		18338.2	
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	TGWFALGSR	TGWFALGSR	2	TGWFALGSR2	17388.3	16954.5	12584.3
O55043	O55043;Q5XXR3	ARHG7_RAT	Arhgef7	Rho guanine nucleotide exchange factor 7	0	TGWFPSNYVR	TGWFPSNYVR	2	TGWFPSNYVR2	80275.5	60119	74215.8
O35854	O35854	BCAT2_RAT	Bcat2	Branched-chain-amino-acid aminotransferase, mitochondrial	1	TGWGPPR	TGWGPPR	2	TGWGPPR2	180530	177420	164321
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	TGWISTSSVWK	TGWISTSSVWK	2	TGWISTSSVWK2	16385	26647.9	24198.5
A0A8I5ZP57	A0A8I5ZP57	A0A8I5ZP57_RAT	Pkdcc	Protein kinase domain containing, cytoplasmic	1	TGWNQVVPDASK	TGWNQVVPDASK	2	TGWNQVVPDASK2	121514	129484	129213
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	TGYESGDYEMLGEGLGVK	TGYESGDYEMLGEGLGVK	2	TGYESGDYEMLGEGLGVK2	78082.7	74382.9	94718.9
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	TGYESGDYEMLGEGLGVK	TGYESGDYEMLGEGLGVK	3	TGYESGDYEMLGEGLGVK3	14079.1	16903.6	20398.2
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	TGYFSSTDLGR	TGYFSSTDLGR	2	TGYFSSTDLGR2	23006.2	33707.3	35135.5
O88277	O88277	FAT2_RAT	Fat2	Protocadherin Fat 2	1	TGYHITGGNEQGK	TGYHITGGNEQGK	3	TGYHITGGNEQGK3		1854.82	
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	TGYLGFVR	TGYLGFVR	2	TGYLGFVR2	15540.4	23261.8	17328.2
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	TGYSAILEFK	TGYSAILEFK	2	TGYSAILEFK2	9627.19	4473.9	9760.68
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	TGYSANITFHTKPFYGGK	TGYSANITFHTKPFYGGK	4	TGYSANITFHTKPFYGGK4		2357.35	8053.88
F1LRE5	F1LRE5	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	1	TGYSANIVFHTKPFYGGK	TGYSANIVFHTKPFYGGK	3	TGYSANIVFHTKPFYGGK3	7198.8	10010.3	4138.65
F1LRE5	F1LRE5	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	1	TGYSANIVFHTKPFYGGK	TGYSANIVFHTKPFYGGK	4	TGYSANIVFHTKPFYGGK4	7443.9	11246.3	7497.64
A0A8I5ZQ92;Q566E4	Q566E4;A0A8I5ZQ92	A0A8I5ZQ92_RAT;Q566E4_RAT	Hnrnpr;Hnrnpr-ps2	Heterogeneous nuclear ribonucleoprotein R-like	0	TGYTLDVTTGQR	TGYTLDVTTGQR	2	TGYTLDVTTGQR2	6756.11	3468.42	5428.14
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	TGYVLQPESMR	TGYVLQPESMR	2	TGYVLQPESMR2	179331	182342	184079
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	TGYVPSNYVER	TGYVPSNYVER	2	TGYVPSNYVER2	365797	391944	378534
P24155	P24155	THOP1_RAT	Thop1	Thimet oligopeptidase	1	THADYVLEMNMAK	THADYVLEMNMAK	2	THADYVLEMNMAK2	1149.29		
P24155	P24155	THOP1_RAT	Thop1	Thimet oligopeptidase	1	THADYVLEMNMAK	THADYVLEMNMAK	3	THADYVLEMNMAK3	3546.61	4112.45	
P09760	P09760	FER_RAT	Fer	Tyrosine-protein kinase Fer	1	THAEDLNSGPLHR	THAEDLNSGPLHR	3	THAEDLNSGPLHR3	9609.53	10310.3	2274.42
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	THAIEFVNYNK	THAIEFVNYNK	3	THAIEFVNYNK3	6637.75	8693.48	5323.06
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	THAVLVALK	THAVLVALK	1	THAVLVALK1	96692.7	51814.3	66276.2
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	THAVLVALK	THAVLVALK	2	THAVLVALK2	767970	696658	666127
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	THAVLVALKR	THAVLVALKR	2	THAVLVALKR2	25351.9	20350.6	18837.3
Q99P39	Q99P39	NFS1_RAT	Nfs1	Cysteine desulfurase	1	THAYGWESEAAMER	THAYGWESEAAMER	3	THAYGWESEAAMER3	10530.6	10493.8	8652.61
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	THDGTCNNLQHPMWGASLTAFER	THDGTC(UniMod:4)NNLQHPMWGASLTAFER	3	THDGTC(UniMod:4)NNLQHPMWGASLTAFER3	3121.95		
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	THDGTCNNLQHPMWGASLTAFER	THDGTC(UniMod:4)NNLQHPMWGASLTAFER	4	THDGTC(UniMod:4)NNLQHPMWGASLTAFER4	5486.33	14223.2	10146
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	THDLYIQSHISENREEIEAVK	THDLYIQSHISENREEIEAVK	4	THDLYIQSHISENREEIEAVK4		4343.43	7973.8
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	THEAEIVEGENHTYCIR	THEAEIVEGENHTYC(UniMod:4)IR	3	THEAEIVEGENHTYC(UniMod:4)IR3	398409	371612	351818
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	THEAEIVEGENHTYCIR	THEAEIVEGENHTYC(UniMod:4)IR	4	THEAEIVEGENHTYC(UniMod:4)IR4	1.2622e+06	1.53498e+06	1.58169e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	THEAQIQEMR	THEAQIQEMR	2	THEAQIQEMR2	4.18254e+06	4.83422e+06	4.33795e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	THEAQIQEMR	THEAQIQEMR	3	THEAQIQEMR3	79176	106881	71783.4
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	THECLVK	THEC(UniMod:4)LVK	2	THEC(UniMod:4)LVK2	44877.1	35334.4	46379.1
P97532	P97532	THTM_RAT	Mpst	3-mercaptopyruvate sulfurtransferase	1	THEDILENLDAR	THEDILENLDAR	2	THEDILENLDAR2	3620.41	5679.64	6261.87
P97532	P97532	THTM_RAT	Mpst	3-mercaptopyruvate sulfurtransferase	1	THEDILENLDAR	THEDILENLDAR	3	THEDILENLDAR3	42837.5	66071.8	56466.4
P21744	P21744	IBP4_RAT	Igfbp4	Insulin-like growth factor-binding protein 4	1	THEDLFIIPIPNCDR	THEDLFIIPIPNC(UniMod:4)DR	3	THEDLFIIPIPNC(UniMod:4)DR3	16121.1	12518.4	10623.7
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	THEIGCPPPPEGK	THEIGC(UniMod:4)PPPPEGK	2	THEIGC(UniMod:4)PPPPEGK2	717767	674222	550068
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	THEIGCPPPPEGK	THEIGC(UniMod:4)PPPPEGK	3	THEIGC(UniMod:4)PPPPEGK3	6.75326e+06	6.99326e+06	6.46944e+06
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	THELEHSAIK	THELEHSAIK	2	THELEHSAIK2	3552.78		4374.44
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	THELEHSAIK	THELEHSAIK	3	THELEHSAIK3	10929.6	10952.6	8079.77
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	THELLHR	THELLHR	2	THELLHR2	36278.4	52953.4	41266.6
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	THEMYLNVMR	THEMYLNVMR	3	THEMYLNVMR3	10386.1	17002.2	19022.2
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	THENIHEEEEDMDSYQDRDLER	THENIHEEEEDMDSYQDRDLER	4	THENIHEEEEDMDSYQDRDLER4	5746.29	6379.1	6098.76
F7FE56	F7FE56	F7FE56_RAT	Tpd52l1	TPD52 like 1	1	THETLSHAGQK	THETLSHAGQK	2	THETLSHAGQK2			13472.8
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	THEVTLR	THEVTLR	2	THEVTLR2	41651	23933.7	31021.6
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	THFDYQFGYR	THFDYQFGYR	3	THFDYQFGYR3	18383.3	18699.5	15423.5
Q6AXV4	Q6AXV4	SAM50_RAT	Samm50	Sorting and assembly machinery component 50 homolog	1	THFFLNAGNLCNLNYGEGPR	THFFLNAGNLC(UniMod:4)NLNYGEGPR	3	THFFLNAGNLC(UniMod:4)NLNYGEGPR3	42973.6	42438.5	41196.5
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	THFQQLMESMENEDKEETLAK	THFQQLMESMENEDKEETLAK	3	THFQQLMESMENEDKEETLAK3	17599.3	16918.3	14013.8
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	THFQQLMESMENEDKEETLAK	THFQQLMESMENEDKEETLAK	4	THFQQLMESMENEDKEETLAK4	24740.8	20440.9	26348.1
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	THFTFNDFISTSSPLR	THFTFNDFISTSSPLR	2	THFTFNDFISTSSPLR2	17126.8	11245.4	16250.7
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	THFTFNDFISTSSPLR	THFTFNDFISTSSPLR	3	THFTFNDFISTSSPLR3	91379.3	108056	106458
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	THFVLPFPVNYVGECVR	THFVLPFPVNYVGEC(UniMod:4)VR	3	THFVLPFPVNYVGEC(UniMod:4)VR3	14896	20207	16737.4
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	THGDEEPAGEAAR	THGDEEPAGEAAR	3	THGDEEPAGEAAR3			12420.7
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	THGFEETHATFLHTDLLK	THGFEETHATFLHTDLLK	4	THGFEETHATFLHTDLLK4	4820.61	2522.59	5663.39
D3ZYL0	D3ZYL0	D3ZYL0_RAT	Ripk1	Receptor interacting serine/threonine kinase 1	1	THGFVILK	THGFVILK	2	THGFVILK2			1729
A0A8I5ZUE7	A0A8I5ZUE7	A0A8I5ZUE7_RAT	Zc3h7b	Zinc finger CCCH-type containing 7B	1	THGPSSFDLQMK	THGPSSFDLQMK	3	THGPSSFDLQMK3	3177.86	6410.4	8522.15
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	THGSEIINDLQGR	THGSEIINDLQGR	2	THGSEIINDLQGR2	16923.1	19573.8	10618
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	THGSEIINDLQGR	THGSEIINDLQGR	3	THGSEIINDLQGR3	136605	150257	146842
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	THGSEYYECSR	THGSEYYEC(UniMod:4)SR	2	THGSEYYEC(UniMod:4)SR2		2777.89	2976.43
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	THGSEYYECSR	THGSEYYEC(UniMod:4)SR	3	THGSEYYEC(UniMod:4)SR3		24002.2	27903.1
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	THGTGIMNTTVNFTYQFLK	THGTGIMNTTVNFTYQFLK	3	THGTGIMNTTVNFTYQFLK3	16113.5	12169.9	6298.64
P23363	P23363	BDNF_RAT	Bdnf	Brain-derived neurotrophic factor	1	THGTLESVNGPR	THGTLESVNGPR	3	THGTLESVNGPR3	6384.74	11560.4	
Q4V7C6	Q4V7C6	GUAA_RAT	Gmps	GMP synthase [glutamine-hydrolyzing]	1	THHNDTELIR	THHNDTELIR	2	THHNDTELIR2	4328.46		
Q4V7C6	Q4V7C6	GUAA_RAT	Gmps	GMP synthase [glutamine-hydrolyzing]	1	THHNDTELIR	THHNDTELIR	3	THHNDTELIR3	64258.5	12868.7	13395.5
Q4V7C6	Q4V7C6	GUAA_RAT	Gmps	GMP synthase [glutamine-hydrolyzing]	1	THHNDTELIRK	THHNDTELIRK	3	THHNDTELIRK3			1931.91
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	THIALDGR	THIALDGR	1	THIALDGR1	1989.36		
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	THIALDGR	THIALDGR	2	THIALDGR2	50143.8	4.68568e+06	5.18196e+06
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	THIDLDLMVVK	THIDLDLMVVK	3	THIDLDLMVVK3	15921.3	17960.6	15356.8
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	THIDTVINALK	THIDTVINALK	2	THIDTVINALK2	23524.2	16017.5	13354.9
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	THIDTVINALK	THIDTVINALK	3	THIDTVINALK3	34470	32211.9	32337.7
G3V681	G3V681	G3V681_RAT	Mcm4	DNA replication licensing factor MCM4	1	THIDVIHYR	THIDVIHYR	3	THIDVIHYR3	37087.1	3657.17	2707.51
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	THIETVINALK	THIETVINALK	2	THIETVINALK2	7218.14	5201.9	4991.75
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	THIETVINALK	THIETVINALK	3	THIETVINALK3	13263.9	36029.7	18867.5
D3ZFQ3	D3ZFQ3	D3ZFQ3_RAT	Nubpl	Nucleotide binding protein-like	1	THIFGADGAR	THIFGADGAR	2	THIFGADGAR2	4137.87	2567.52	4917.69
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	THILLFLPK	THILLFLPK	2	THILLFLPK2	665438	590223	603059
P62630	P62632;P62630;M0R757;A0A8I6AKD4	EF1A1_RAT	Eef1a1	Elongation factor 1-alpha 1	0	THINIVVIGHVDSGK	THINIVVIGHVDSGK	2	THINIVVIGHVDSGK2	1860.72		
P62630	P62632;P62630;M0R757;A0A8I6AKD4	EF1A1_RAT	Eef1a1	Elongation factor 1-alpha 1	0	THINIVVIGHVDSGK	THINIVVIGHVDSGK	3	THINIVVIGHVDSGK3	11705.8	7634.58	6118.51
P62630	P62632;P62630;M0R757;A0A8I6AKD4	EF1A1_RAT	Eef1a1	Elongation factor 1-alpha 1	0	THINIVVIGHVDSGK	THINIVVIGHVDSGK	4	THINIVVIGHVDSGK4	29926.3	17268.4	17701.4
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	THINYGVK	THINYGVK	2	THINYGVK2	59414.1	55359.4	53927.6
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	THIPFAFK	THIPFAFK	1	THIPFAFK1	5546.76	2643.04	
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	THIPFAFK	THIPFAFK	2	THIPFAFK2	235988	278040	248234
Q02353	Q02353	NDST1_RAT	Ndst1	Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1	1	THIPNFTFNLGYSGK	THIPNFTFNLGYSGK	3	THIPNFTFNLGYSGK3	4548.9	3486	1716.47
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	THIQDNHDGTYTVAYVPDVTGR	THIQDNHDGTYTVAYVPDVTGR	3	THIQDNHDGTYTVAYVPDVTGR3	1.16628e+06	1.00704e+06	1.05329e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	THIQDNHDGTYTVAYVPDVTGR	THIQDNHDGTYTVAYVPDVTGR	4	THIQDNHDGTYTVAYVPDVTGR4	249938	219234	250242
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	THITNAFNWLSMK	THITNAFNWLSMK	2	THITNAFNWLSMK2	2.81226e+06	2.14953e+06	1.68666e+06
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	THITNAFNWLSMK	THITNAFNWLSMK	3	THITNAFNWLSMK3	26157.3	20369.3	19401.6
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	THIVCMTSAHAPSGWAPVLVNIK	THIVC(UniMod:4)MTSAHAPSGWAPVLVNIK	3	THIVC(UniMod:4)MTSAHAPSGWAPVLVNIK3	11784.4	17424.9	7166.66
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	THIVCMTSAHAPSGWAPVLVNIK	THIVC(UniMod:4)MTSAHAPSGWAPVLVNIK	4	THIVC(UniMod:4)MTSAHAPSGWAPVLVNIK4	58817.1	56427.2	69039.1
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	THIYIQTDITGYKPAPGDLAYPDK	THIYIQTDITGYKPAPGDLAYPDK	3	THIYIQTDITGYKPAPGDLAYPDK3	3528.31	3616.81	2663.58
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	THIYIQTDITGYKPAPGDLAYPDK	THIYIQTDITGYKPAPGDLAYPDK	4	THIYIQTDITGYKPAPGDLAYPDK4		7978.49	5067.96
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	THKNPALK	THKNPALK	2	THKNPALK2			275870
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	THLENNR	THLENNR	2	THLENNR2			22288.3
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	THLFDSRPR	THLFDSRPR	2	THLFDSRPR2		3480.6	2211.26
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	THLLSAAQGHMDEDVQAALLQIIQMR	THLLSAAQGHMDEDVQAALLQIIQMR	3	THLLSAAQGHMDEDVQAALLQIIQMR3	1768.43		9002.45
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	THLLSAAQGHMDEDVQAALLQIIQMR	THLLSAAQGHMDEDVQAALLQIIQMR	4	THLLSAAQGHMDEDVQAALLQIIQMR4	25908.2	17447.7	15084.3
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	THLLSLSSLTYQR	THLLSLSSLTYQR	3	THLLSLSSLTYQR3	5895.21	5404.33	8719.26
F1M9Q3	F1M9Q3	F1M9Q3_RAT	Ltn1	E3 ubiquitin-protein ligase listerin	1	THLPDFLICK	THLPDFLIC(UniMod:4)K	2	THLPDFLIC(UniMod:4)K2	8284.13	2190.11	
F1M9Q3	F1M9Q3	F1M9Q3_RAT	Ltn1	E3 ubiquitin-protein ligase listerin	1	THLPDFLICK	THLPDFLIC(UniMod:4)K	3	THLPDFLIC(UniMod:4)K3	10430.3	6119.07	5885.25
Q9R063	Q9R063	PRDX5_RAT	Prdx5	Peroxiredoxin-5, mitochondrial	1	THLPGFVEQAGALK	THLPGFVEQAGALK	2	THLPGFVEQAGALK2	116246	92163.5	79520.6
Q9R063	Q9R063	PRDX5_RAT	Prdx5	Peroxiredoxin-5, mitochondrial	1	THLPGFVEQAGALK	THLPGFVEQAGALK	3	THLPGFVEQAGALK3	406078	414734	410062
P17988	P17988	ST1A1_RAT	Sult1a1	Sulfotransferase 1A1	1	THLPLSLLPQSLLDQK	THLPLSLLPQSLLDQK	3	THLPLSLLPQSLLDQK3	10227.8	9505.67	13029.2
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	THLSEVQEFFENQSEATLQLR	THLSEVQEFFENQSEATLQLR	3	THLSEVQEFFENQSEATLQLR3		5073.02	6777.99
Q2THW7	Q2THW7	ZDHC5_RAT	Zdhhc5	Palmitoyltransferase ZDHHC5	1	THLSLATNEDSSLLGK	THLSLATNEDSSLLGK	3	THLSLATNEDSSLLGK3	3550.91	2601.95	5437.53
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	THLSLSHNPEQK	THLSLSHNPEQK	3	THLSLSHNPEQK3	31692	22839.4	21641.7
Q99MB4	Q99MB4	ZNG1_RAT	Zng1	Zinc-regulated GTPase metalloprotein activator 1	1	THLSNILDLHAYDTLSGISLQK	THLSNILDLHAYDTLSGISLQK	4	THLSNILDLHAYDTLSGISLQK4	2706.1	3524.69	5122.87
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	THLTELQR	THLTELQR	2	THLTELQR2	94172.8	111605	102681
E9PT79	E9PT79	E9PT79_RAT	Tsn	Translin	1	THLTSLK	THLTSLK	2	THLTSLK2	21187.4	26657.3	
Q9JJM9	Q9JJM9	SEPT5_RAT	Septin5	Septin-5	1	THMHDLK	THMHDLK	1	THMHDLK1			590.154
Q9JJM9	Q9JJM9	SEPT5_RAT	Septin5	Septin-5	1	THMHDLKDVTCDVHYENYR	THMHDLKDVTC(UniMod:4)DVHYENYR	4	THMHDLKDVTC(UniMod:4)DVHYENYR4	5536.28	2055.82	6024.02
Q9WVC0	A0A096MJN4;Q9WVC0;A0A8I6ARI4	SEPT7_RAT	Septin7	Septin-7	0	THMQDLK	THMQDLK	2	THMQDLK2	108690	115436	101224
A0A8I6A4X3	A0A8I6A4X3	A0A8I6A4X3_RAT	Selplg	Selectin P ligand	1	THMYPVR	THMYPVR	2	THMYPVR2	39948.5	38945.1	27417.3
P58751	P58751	RELN_RAT	Reln	Reelin	1	THNALSSR	THNALSSR	2	THNALSSR2			28774.4
P31977	P31977	EZRI_RAT	Ezr	Ezrin	1	THNDIIHNENMR	THNDIIHNENMR	3	THNDIIHNENMR3	5873.4		
P09330	P09330;A0A0G2JSV3;M0RBK1;P60892	PRPS2_RAT	Prps2	Ribose-phosphate pyrophosphokinase 2	0	THNGESVSYLFSHVPL	THNGESVSYLFSHVPL	3	THNGESVSYLFSHVPL3	7513.51	4164.9	5897.48
P47942	P47942	DPYL2_RAT	Dpysl2	Dihydropyrimidinase-related protein 2	1	THNSALEYNIFEGMECR	THNSALEYNIFEGMEC(UniMod:4)R	3	THNSALEYNIFEGMEC(UniMod:4)R3	18024.5	26442.2	16582.5
Q5U2X7	Q5U2X7	TIM21_RAT	Timm21	Mitochondrial import inner membrane translocase subunit Tim21	1	THPEVISVFGEPVK	THPEVISVFGEPVK	3	THPEVISVFGEPVK3	6020.3	9611.96	10313.6
D3ZDE4	D3ZDE4	D3ZDE4_RAT	Dguok	Deoxyguanosine kinase	1	THPEWQVATEPIATWQNVQAAGTQK	THPEWQVATEPIATWQNVQAAGTQK	3	THPEWQVATEPIATWQNVQAAGTQK3	5831.29	14122.3	6593.74
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	THPHSCCHYPPSPAR	THPHSC(UniMod:4)C(UniMod:4)HYPPSPAR	2	THPHSC(UniMod:4)C(UniMod:4)HYPPSPAR2			37354.6
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	THPHSCCHYPPSPAR	THPHSC(UniMod:4)C(UniMod:4)HYPPSPAR	3	THPHSC(UniMod:4)C(UniMod:4)HYPPSPAR3			70052.9
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	THPHSCCHYPPSPAR	THPHSC(UniMod:4)C(UniMod:4)HYPPSPAR	4	THPHSC(UniMod:4)C(UniMod:4)HYPPSPAR4			318039
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	THPICLCLDK	THPIC(UniMod:4)LC(UniMod:4)LDK	3	THPIC(UniMod:4)LC(UniMod:4)LDK3	20800.1	13619.5	23432.4
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	THPICLSLDK	THPIC(UniMod:4)LSLDK	3	THPIC(UniMod:4)LSLDK3	29113.8	31695.4	30884.1
F1M8V2	F1M8V2	F1M8V2_RAT	Ube4b	Ubiquitin conjugation factor E4	1	THPMCNLVASLPLWLPK	THPMC(UniMod:4)NLVASLPLWLPK	3	THPMC(UniMod:4)NLVASLPLWLPK3	11496	12293.7	4382.57
Q64232	Q64232	TECR_RAT	Tecr	Very-long-chain enoyl-CoA reductase	1	THPQWYPAR	THPQWYPAR	2	THPQWYPAR2	140196	104453	129813
Q64232	Q64232	TECR_RAT	Tecr	Very-long-chain enoyl-CoA reductase	1	THPQWYPAR	THPQWYPAR	3	THPQWYPAR3	481380	518823	662868
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	THPSVVPGCIAFSLPQR	THPSVVPGC(UniMod:4)IAFSLPQR	3	THPSVVPGC(UniMod:4)IAFSLPQR3	19052.8	16602.8	18731.2
P26051	P26051	CD44_RAT	Cd44	CD44 antigen	1	THQEDIDASNIIDEDVSSGSTIEK	THQEDIDASNIIDEDVSSGSTIEK	3	THQEDIDASNIIDEDVSSGSTIEK3	33250.9	33479.6	30703.5
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	THQEMCEQLNINHMIQR	THQEMC(UniMod:4)EQLNINHMIQR	3	THQEMC(UniMod:4)EQLNINHMIQR3	8016.64	9317.72	10186.9
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	THQEMCEQLNINHMIQR	THQEMC(UniMod:4)EQLNINHMIQR	4	THQEMC(UniMod:4)EQLNINHMIQR4		9560.44	6864.37
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	THQFFVK	THQFFVK	2	THQFFVK2	2092.2	7112.32	2499.6
Q9JJ76	Q06486;Q9JJ76	Q9JJ76_RAT	Csnk1e	Casein kinase 1 epsilon	0	THQHIPYR	THQHIPYR	2	THQHIPYR2	2951.02		
P11915	P11915	SCP2_RAT	Scp2	Sterol carrier protein 2	1	THQISAAPTSSAGDGFK	THQISAAPTSSAGDGFK	3	THQISAAPTSSAGDGFK3	5863.1	8953.49	7531.4
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	THQLELEDGLSSHQPCLIDVNQK	THQLELEDGLSSHQPC(UniMod:4)LIDVNQK	3	THQLELEDGLSSHQPC(UniMod:4)LIDVNQK3	19611.4	26261.3	19500.3
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	THQLELEDGLSSHQPCLIDVNQK	THQLELEDGLSSHQPC(UniMod:4)LIDVNQK	4	THQLELEDGLSSHQPC(UniMod:4)LIDVNQK4	32842.1	53017.4	42069.4
E9PU37	E9PU37	E9PU37_RAT	Zdhhc13	Palmitoyltransferase	1	THQNTPLHWAVAAGNVSAVDK	THQNTPLHWAVAAGNVSAVDK	3	THQNTPLHWAVAAGNVSAVDK3	4291.79	9951.61	2776.55
E9PU37	E9PU37	E9PU37_RAT	Zdhhc13	Palmitoyltransferase	1	THQNTPLHWAVAAGNVSAVDK	THQNTPLHWAVAAGNVSAVDK	4	THQNTPLHWAVAAGNVSAVDK4	31838.8	30100.3	33141.4
P35435	P35435	ATPG_RAT	Atp5f1c	ATP synthase subunit gamma, mitochondrial	1	THSDQFLVSFK	THSDQFLVSFK	2	THSDQFLVSFK2	100993	112957	133702
P35435	P35435	ATPG_RAT	Atp5f1c	ATP synthase subunit gamma, mitochondrial	1	THSDQFLVSFK	THSDQFLVSFK	3	THSDQFLVSFK3	442096	374029	492618
Q05511	Q05511	HEPS_RAT	Hpn	Serine protease hepsin	1	THSEATGMVTQP	THSEATGMVTQP	2	THSEATGMVTQP2	36233.1	29623.6	41162.2
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	THSGILGK	THSGILGK	2	THSGILGK2	13098.7	6805.8	13685.3
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	THSGLTDGIPLQSISAPGSGIWSDGKDK	THSGLTDGIPLQSISAPGSGIWSDGKDK	4	THSGLTDGIPLQSISAPGSGIWSDGKDK4	5458.98	9602.34	7949.64
P55797	P55797	APOC4_RAT	Apoc4	Apolipoprotein C-IV	1	THSLCPR	THSLC(UniMod:4)PR	1	THSLC(UniMod:4)PR1	2812.15		4364.71
P55797	P55797	APOC4_RAT	Apoc4	Apolipoprotein C-IV	1	THSLCPR	THSLC(UniMod:4)PR	2	THSLC(UniMod:4)PR2			2.30455e+06
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	THSNPDFLPVDNCLQSVLGQR	THSNPDFLPVDNC(UniMod:4)LQSVLGQR	3	THSNPDFLPVDNC(UniMod:4)LQSVLGQR3	98451.8	133017	111614
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	THSPQTSAMLFTVDNEAGK	THSPQTSAMLFTVDNEAGK	3	THSPQTSAMLFTVDNEAGK3	11303.3	16874.6	7959.75
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	THSSFSSTVK	THSSFSSTVK	2	THSSFSSTVK2		8245.85	
Q6AYR2	A0A8I6ASR6;Q6AYR2	NDRG3_RAT	Ndrg3	Protein NDRG3	0	THSTSSSIGSGESPFSR	THSTSSSIGSGESPFSR	3	THSTSSSIGSGESPFSR3	6834.31	8399.86	4819.28
Q80W89	Q80W89	NDUAB_RAT	Ndufa11	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11	1	THSYGTAAIGCVYMGTAAALFK	THSYGTAAIGC(UniMod:4)VYMGTAAALFK	3	THSYGTAAIGC(UniMod:4)VYMGTAAALFK3	12210	4937.68	8596.14
Q3L7M0	Q3L7M0	GGTA1_RAT	Ggta1	N-acetyllactosaminide alpha-1,3-galactosyltransferase	1	THSYQEEDIER	THSYQEEDIER	2	THSYQEEDIER2	4899.05	4320.79	2759.19
Q3L7M0	Q3L7M0	GGTA1_RAT	Ggta1	N-acetyllactosaminide alpha-1,3-galactosyltransferase	1	THSYQEEDIER	THSYQEEDIER	3	THSYQEEDIER3	5532.15	13307.2	12844.5
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	THTAAIDER	THTAAIDER	2	THTAAIDER2			12224.3
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	THTALLR	THTALLR	2	THTALLR2	13732.5	29442.3	13367.2
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	THTEYLHSR	THTEYLHSR	2	THTEYLHSR2			4302.43
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	THTEYLHSR	THTEYLHSR	3	THTEYLHSR3			34812.2
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	THTHIVIPYR	THTHIVIPYR	2	THTHIVIPYR2	3108.55	985.044	6039.9
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	THTHIVIPYR	THTHIVIPYR	3	THTHIVIPYR3	111685	74723.4	121273
B2RYF7	B2RYF7	WASH1_RAT	Washc1	WASH complex subunit 1	1	THTMLGTEEEK	THTMLGTEEEK	2	THTMLGTEEEK2	5686.41		
B2RYF7	B2RYF7	WASH1_RAT	Washc1	WASH complex subunit 1	1	THTMLGTEEEK	THTMLGTEEEK	3	THTMLGTEEEK3	12005	13143.6	8610.15
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	THTQDAVPLTLGQEFSGYVQQVQYAMER	THTQDAVPLTLGQEFSGYVQQVQYAMER	4	THTQDAVPLTLGQEFSGYVQQVQYAMER4		6317.22	6035.84
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	THTQILQGLIPDTR	THTQILQGLIPDTR	2	THTQILQGLIPDTR2	31925.2	38970.9	55454.5
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	THTQILQGLIPDTR	THTQILQGLIPDTR	3	THTQILQGLIPDTR3	296751	334392	290480
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	THTQILQGLIPDTRYEVTVVSVR	THTQILQGLIPDTRYEVTVVSVR	4	THTQILQGLIPDTRYEVTVVSVR4	5873.39	4688.29	6494.96
P07633	P07633	PCCB_RAT	Pccb	Propionyl-CoA carboxylase beta chain, mitochondrial	1	THTTVSGVAHR	THTTVSGVAHR	2	THTTVSGVAHR2		839.052	4493.4
P07633	P07633	PCCB_RAT	Pccb	Propionyl-CoA carboxylase beta chain, mitochondrial	1	THTTVSGVAHR	THTTVSGVAHR	3	THTTVSGVAHR3			27991.3
D3ZP96	D3ZP96	D3ZP96_RAT	Mcm2	DNA replication licensing factor MCM2	1	THVDSHGHNVFK	THVDSHGHNVFK	2	THVDSHGHNVFK2	4215.7		5983.58
D3ZP96	D3ZP96	D3ZP96_RAT	Mcm2	DNA replication licensing factor MCM2	1	THVDSHGHNVFK	THVDSHGHNVFK	3	THVDSHGHNVFK3	42511.8		3658.18
Q4V8I7	Q4V8I7	LRC8A_RAT	Lrrc8a	Volume-regulated anion channel subunit LRRC8A	1	THVEEGDIVYR	THVEEGDIVYR	3	THVEEGDIVYR3	7506.64	7816.64	9824.42
Q5RJQ0	Q5RJQ0	CHST1_RAT	Chst1	Carbohydrate sulfotransferase 1	1	THVLILATTR	THVLILATTR	2	THVLILATTR2	5189.69	7767.36	2353.09
E9PTZ7	E9PTZ7	E9PTZ7_RAT	ENSRNOG00000069480	Ig-like domain-containing protein	1	THVTLHPRPEGDVTLR	THVTLHPRPEGDVTLR	3	THVTLHPRPEGDVTLR3	16055	4963.02	5452.67
E9PTZ7	E9PTZ7	E9PTZ7_RAT	ENSRNOG00000069480	Ig-like domain-containing protein	1	THVTLHPRPEGDVTLR	THVTLHPRPEGDVTLR	4	THVTLHPRPEGDVTLR4	80864	56992.1	64561.6
A0A8I6AA52	A0A8I6AA52	A0A8I6AA52_RAT	Wdr48	WD repeat-containing protein 48	1	THVTPMDEEENEVNHVSGEQESR	THVTPMDEEENEVNHVSGEQESR	4	THVTPMDEEENEVNHVSGEQESR4	9462.01	6521.59	2920.61
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	THWGYYNWPK	THWGYYNWPK	3	THWGYYNWPK3	8321.57	15978.8	7083.18
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	THYAVQDTK	THYAVQDTK	2	THYAVQDTK2	32295.3		34336.8
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	THYFWPLLVGHQK	THYFWPLLVGHQK	3	THYFWPLLVGHQK3	8512.12	14307.3	3744.92
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	THYFWPLLVGHQK	THYFWPLLVGHQK	4	THYFWPLLVGHQK4	6492.39	2115.72	5018.23
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	THYGPGTGPIWLDDMGCK	THYGPGTGPIWLDDMGC(UniMod:4)K	3	THYGPGTGPIWLDDMGC(UniMod:4)K3	11603.1	21093.8	21558
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	THYSPQR	THYSPQR	2	THYSPQR2			69977.2
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	TIAACNLPIVQGPCR	TIAAC(UniMod:4)NLPIVQGPC(UniMod:4)R	2	TIAAC(UniMod:4)NLPIVQGPC(UniMod:4)R2	619048	654146	1.99859e+08
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	TIAACNLPIVQGPCR	TIAAC(UniMod:4)NLPIVQGPC(UniMod:4)R	3	TIAAC(UniMod:4)NLPIVQGPC(UniMod:4)R3	116081	4.75384e+07	4.82201e+07
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	TIAACNLPIVQGPCR	TIAAC(UniMod:4)NLPIVQGPC(UniMod:4)R	4	TIAAC(UniMod:4)NLPIVQGPC(UniMod:4)R4	34555.4	37952.3	29689.6
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	TIAACNLPIVQGPCRAFAELWAFDAAQGK	TIAAC(UniMod:4)NLPIVQGPC(UniMod:4)RAFAELWAFDAAQGK	4	TIAAC(UniMod:4)NLPIVQGPC(UniMod:4)RAFAELWAFDAAQGK4	7150.55	21735.8	18986.5
Q498R3	Q498R3	DJC10_RAT	Dnajc10	DnaJ homolog subfamily C member 10	1	TIAALIYGK	TIAALIYGK	2	TIAALIYGK2	33446.9	31756.5	30338.4
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	TIAEANEK	TIAEANEK	1	TIAEANEK1	2479.6		6073
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	TIAEANEK	TIAEANEK	2	TIAEANEK2	151872		100582
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	TIAELHR	TIAELHR	2	TIAELHR2	43345.9	39206.1	35542
B0BNL6	B0BNL6	ARRD1_RAT	Arrdc1	Arrestin domain-containing protein 1	1	TIAEVEGTGVK	TIAEVEGTGVK	2	TIAEVEGTGVK2	10549.4	8343.17	
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	TIAIIAEGIPEALTR	TIAIIAEGIPEALTR	2	TIAIIAEGIPEALTR2	15072.6	12958.2	11193.3
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	TIAIIAEGIPEALTR	TIAIIAEGIPEALTR	3	TIAIIAEGIPEALTR3	2469.07	2905.1	
A0A8I6ACU9	A0A8I6ACU9	A0A8I6ACU9_RAT	Timm50	Mitochondrial import inner membrane translocase subunit TIM50	1	TIALNQVEDVR	TIALNQVEDVR	2	TIALNQVEDVR2	91365.9	79476.6	82893.9
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	TIAMDGTEGLVR	TIAMDGTEGLVR	2	TIAMDGTEGLVR2	2.13103e+06	2.02651e+06	2.26892e+06
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	TIAMDGTEGLVR	TIAMDGTEGLVR	3	TIAMDGTEGLVR3		2228.05	5327.83
P04764	M0R5J4;P04764	ENOA_RAT	Eno1	Alpha-enolase	0	TIAPALVSK	TIAPALVSK	1	TIAPALVSK1	9080.09	8013.88	7830.86
P04764	M0R5J4;P04764	ENOA_RAT	Eno1	Alpha-enolase	0	TIAPALVSK	TIAPALVSK	2	TIAPALVSK2	598795	510145	554238
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	TIAPCQK	TIAPC(UniMod:4)QK	1	TIAPC(UniMod:4)QK1	8878.89	9512.18	
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	TIAPCQK	TIAPC(UniMod:4)QK	2	TIAPC(UniMod:4)QK2	232037	269038	
Q63716	Q63716;A0A0G2K3Z9	PRDX1_RAT	Prdx1	Peroxiredoxin-1	0	TIAQDYGVLK	TIAQDYGVLK	2	TIAQDYGVLK2	335765	287080	312262
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TIAQIIDR	TIAQIIDR	2	TIAQIIDR2	584765	668733	611497
A0A0G2K9K2	A0A0G2K598;A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	0	TIAQMIEDEQR	TIAQMIEDEQR	2	TIAQMIEDEQR2	291347	286189	255956
A0A0G2K9K2	A0A0G2K598;A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	0	TIAQMIEDEQR	TIAQMIEDEQR	3	TIAQMIEDEQR3	23152.7	26859.7	20402.7
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	TIAQQIK	TIAQQIK	2	TIAQQIK2	38588.5	47427.6	41076.7
A0A0G2K350	A0A0G2K350	A0A0G2K350_RAT	Napg	NSF attachment protein gamma	1	TIAQVLVHLHR	TIAQVLVHLHR	3	TIAQVLVHLHR3	75873.5	84285.6	84038.7
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	TIAQYAR	TIAQYAR	2	TIAQYAR2	77452.5	83543	63810.8
D3ZKU7	D3ZKU7	BL1S1_RAT	Bloc1s1	Biogenesis of lysosome-related organelles complex 1 subunit 1	1	TIATALEYVYK	TIATALEYVYK	2	TIATALEYVYK2	27855.6	21509.6	33510.4
Q5XIH7	Q5XIH7	PHB2_RAT	Phb2	Prohibitin-2	1	TIATSQNR	TIATSQNR	2	TIATSQNR2			210574
Q6P7R8	Q6P7R8	DHB12_RAT	Hsd17b12	Very-long-chain 3-oxoacyl-CoA reductase	1	TIAVDFSLDDIYDK	TIAVDFSLDDIYDK	2	TIAVDFSLDDIYDK2	12633.7	8868.03	9067.25
Q6P7R8	Q6P7R8	DHB12_RAT	Hsd17b12	Very-long-chain 3-oxoacyl-CoA reductase	1	TIAVDFSLDDIYDKIK	TIAVDFSLDDIYDKIK	3	TIAVDFSLDDIYDKIK3	30829.1	31331.5	22883.7
B5DEZ3	B5DEZ3	B5DEZ3_RAT	Ccdc126	Coiled-coil domain containing 126	1	TIAVLLDDILQR	TIAVLLDDILQR	2	TIAVLLDDILQR2	18823.1	30190.6	27860.7
B5DEZ3	B5DEZ3	B5DEZ3_RAT	Ccdc126	Coiled-coil domain containing 126	1	TIAVLLDDILQR	TIAVLLDDILQR	3	TIAVLLDDILQR3		2963.46	5857.28
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	TIAVLLPCLLDK	TIAVLLPC(UniMod:4)LLDK	2	TIAVLLPC(UniMod:4)LLDK2	4988.82	1856.19	6171.63
Q6P799	Q6P799	SYSC_RAT	Sars1	Serine--tRNA ligase, cytoplasmic	1	TICAILENYQTEK	TIC(UniMod:4)AILENYQTEK	2	TIC(UniMod:4)AILENYQTEK2	11729.8	6409.43	3758.46
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	TICDWEGGR	TIC(UniMod:4)DWEGGR	2	TIC(UniMod:4)DWEGGR2		6893.67	
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	TICDWEGGREPPNDPCLR	TIC(UniMod:4)DWEGGREPPNDPC(UniMod:4)LR	3	TIC(UniMod:4)DWEGGREPPNDPC(UniMod:4)LR3	26058.3	36923.8	16950
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	TICIETIK	TIC(UniMod:4)IETIK	2	TIC(UniMod:4)IETIK2	154811	207519	163344
P11505	P11505	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	1	TICLAFR	TIC(UniMod:4)LAFR	2	TIC(UniMod:4)LAFR2	36971.7	33741.7	34764.4
A0A8J8YFS5	A0A8I6ALV4;A0A8J8YFS5	A0A8J8YFS5_RAT	Hars1	Histidine--tRNA ligase, cytoplasmic	0	TICSSVDK	TIC(UniMod:4)SSVDK	2	TIC(UniMod:4)SSVDK2	27795.6	25672.4	
P58775	P58775	TPM2_RAT	Tpm2	Tropomyosin beta chain	1	TIDDLEDEVYAQK	TIDDLEDEVYAQK	2	TIDDLEDEVYAQK2	38365.6	29539.3	26670.5
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	TIDDLEDK	TIDDLEDK	1	TIDDLEDK1	8558.51	3361.11	8541.28
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	TIDDLEDK	TIDDLEDK	2	TIDDLEDK2	1.74451e+06	1.24037e+06	1.74895e+06
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	TIDDLEDKLK	TIDDLEDKLK	2	TIDDLEDKLK2	1.51877e+06	1.56208e+06	1.49536e+06
Q63610	Q63610	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	1	TIDDLEDKLK	TIDDLEDKLK	3	TIDDLEDKLK3	6.61404e+06	7.17902e+06	6.77e+06
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	TIDDLEEK	TIDDLEEK	1	TIDDLEEK1	154360	144086	199049
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	TIDDLEEK	TIDDLEEK	2	TIDDLEEK2	2.50646e+07	2.5187e+07	2.84705e+07
Q5XIK2	Q5XIK2	TMX2_RAT	Tmx2	Thioredoxin-related transmembrane protein 2	1	TIDEELERDK	TIDEELERDK	3	TIDEELERDK3	8467.74	19400.6	13098.9
A0A0G2JST1	A0A0G2JST1	A0A0G2JST1_RAT	Adgrg6	Adhesion G protein-coupled receptor G6	1	TIDELAFK	TIDELAFK	2	TIDELAFK2	25485.3	26690.2	23035.2
F7FNG5	F7FNG5	F7FNG5_RAT	Cul4a	Cullin 4A	1	TIDGILLLIGR	TIDGILLLIGR	2	TIDGILLLIGR2	5364.03	6171.75	2807.51
B2GUZ5	B2GUZ5	CAZA1_RAT	Capza1	F-actin-capping protein subunit alpha-1	1	TIDGQQTIIACIESHQFQPK	TIDGQQTIIAC(UniMod:4)IESHQFQPK	3	TIDGQQTIIAC(UniMod:4)IESHQFQPK3	142149	129933	182287
P04041	P04041	GPX1_RAT	Gpx1	Glutathione peroxidase 1	1	TIDIEPDIEALLSK	TIDIEPDIEALLSK	2	TIDIEPDIEALLSK2	99993.3	76032.8	97269.4
P04041	P04041	GPX1_RAT	Gpx1	Glutathione peroxidase 1	1	TIDIEPDIEALLSK	TIDIEPDIEALLSK	3	TIDIEPDIEALLSK3	5187.27	11612	4161.36
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	TIDLCNNPMTK	TIDLC(UniMod:4)NNPMTK	2	TIDLC(UniMod:4)NNPMTK2	156288	149520	121691
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	TIDLGAAAHYTGDK	TIDLGAAAHYTGDK	2	TIDLGAAAHYTGDK2	26574.3	27436.9	27872.3
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	TIDLGAAAHYTGDK	TIDLGAAAHYTGDK	3	TIDLGAAAHYTGDK3	174103	199759	205110
Q5FVI3	A0A8I6AP35;Q5FVI3	LRC57_RAT	Lrrc57	Leucine-rich repeat-containing protein 57	0	TIDLSNNK	TIDLSNNK	2	TIDLSNNK2	40545.9	35681.6	41245.5
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	TIDMELVK	TIDMELVK	1	TIDMELVK1	8606.98	11809.7	8379.01
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	TIDMELVK	TIDMELVK	2	TIDMELVK2	1.70831e+06	1.69314e+06	1.80825e+06
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	TIDMELVKR	TIDMELVKR	2	TIDMELVKR2	20432.6	15697	11965.1
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	TIDQIHK	TIDQIHK	2	TIDQIHK2	98601.5	106898	83858.9
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TIDQMLSSELQWPLPEVYLR	TIDQMLSSELQWPLPEVYLR	3	TIDQMLSSELQWPLPEVYLR3	15954.2	12926.8	11682.3
Q62833	Q62833	GRK5_RAT	Grk5	G protein-coupled receptor kinase 5	1	TIDRDYYSLCDK	TIDRDYYSLC(UniMod:4)DK	3	TIDRDYYSLC(UniMod:4)DK3	9078.43	3492.67	3647.88
Q9EQG6	Q9EQG6	KDIS_RAT	Kidins220	Kinase D-interacting substrate of 220 kDa	1	TIDSFTQNQTR	TIDSFTQNQTR	2	TIDSFTQNQTR2	7990.11	3864.51	4150.49
P15127	P15127	INSR_RAT	Insr	Insulin receptor	1	TIDSVTSAQELR	TIDSVTSAQELR	2	TIDSVTSAQELR2	8835.59	10103.7	7671.33
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	TIDVIVR	TIDVIVR	2	TIDVIVR2	60618.6	59730.1	50124.5
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	TIDVNDFINWASSLDDAPALISQK	TIDVNDFINWASSLDDAPALISQK	3	TIDVNDFINWASSLDDAPALISQK3	51991	5239	10982.1
P31399	P31399;A0A8I5ZWF8	ATP5H_RAT	Atp5pd	ATP synthase subunit d, mitochondrial	0	TIDWVSFVEIMPQNQK	TIDWVSFVEIMPQNQK	2	TIDWVSFVEIMPQNQK2	61329.5	97626.5	88350.5
P31399	P31399;A0A8I5ZWF8	ATP5H_RAT	Atp5pd	ATP synthase subunit d, mitochondrial	0	TIDWVSFVEIMPQNQK	TIDWVSFVEIMPQNQK	3	TIDWVSFVEIMPQNQK3	73430.8	84775.8	105774
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	TIEAEAAHGTVTR	TIEAEAAHGTVTR	2	TIEAEAAHGTVTR2	21353.3	18947.1	18501.6
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	TIEAEAAHGTVTR	TIEAEAAHGTVTR	3	TIEAEAAHGTVTR3	490943	462835	441718
A0A8I6ANI3	A0A8I6ANI3	A0A8I6ANI3_RAT	Ctla2a	Cytotoxic T lymphocyte-associated protein 2 alpha	1	TIEAHNADYK	TIEAHNADYK	2	TIEAHNADYK2	48741	61065.9	36822.3
A0A8I6ANI3	A0A8I6ANI3	A0A8I6ANI3_RAT	Ctla2a	Cytotoxic T lymphocyte-associated protein 2 alpha	1	TIEAHNADYK	TIEAHNADYK	3	TIEAHNADYK3	30600.2	29270.3	49728.2
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	TIECISLIGLAVGK	TIEC(UniMod:4)ISLIGLAVGK	2	TIEC(UniMod:4)ISLIGLAVGK2	86272.4	80965.9	68150.8
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	TIECISLIGLAVGK	TIEC(UniMod:4)ISLIGLAVGK	3	TIEC(UniMod:4)ISLIGLAVGK3	7045.21	5119.82	5820.83
Q9JHU5	Q9JHU5	ARFP1_RAT	Arfip1	Arfaptin-1	1	TIEDTLMTVK	TIEDTLMTVK	2	TIEDTLMTVK2	49534	42744.7	33390.1
Q4V8I7	Q4V8I7	LRC8A_RAT	Lrrc8a	Volume-regulated anion channel subunit LRRC8A	1	TIEEIISFQHLHR	TIEEIISFQHLHR	4	TIEEIISFQHLHR4	6706.95	7769	9402.04
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	TIEEIISFQHLK	TIEEIISFQHLK	2	TIEEIISFQHLK2	2769.24	2694.67	1580.25
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	TIEEIISFQHLK	TIEEIISFQHLK	3	TIEEIISFQHLK3	16469.2	20480.3	27609.4
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	TIEELAR	TIEELAR	2	TIEELAR2		324997	268894
D3ZAP9	D3ZAP9	D3ZAP9_RAT	Gpd1l1	Glycerol-3-phosphate dehydrogenase [NAD(+)]	1	TIEELEKELLNGQK	TIEELEKELLNGQK	3	TIEELEKELLNGQK3	2899.74	2261.88	
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	TIEEVVGR	TIEEVVGR	2	TIEEVVGR2	565981	641271	704543
P38652	P38652	PGM1_RAT	Pgm1	Phosphoglucomutase-1	1	TIEEYAICPDLK	TIEEYAIC(UniMod:4)PDLK	2	TIEEYAIC(UniMod:4)PDLK2	5641.61	3132.35	6554.8
P53676	P53676	AP3M1_RAT	Ap3m1	AP-3 complex subunit mu-1	1	TIEGITVTVHMPK	TIEGITVTVHMPK	2	TIEGITVTVHMPK2	5857.05	4149.66	6088.86
P53676	P53676	AP3M1_RAT	Ap3m1	AP-3 complex subunit mu-1	1	TIEGITVTVHMPK	TIEGITVTVHMPK	3	TIEGITVTVHMPK3	36125.6	31858.5	33480.9
A0A8I6A0R8	A0A8I6A0R8	A0A8I6A0R8_RAT	Srl	Sarcalumenin	1	TIEGIVMAADSAR	TIEGIVMAADSAR	2	TIEGIVMAADSAR2	8624.01	8174.33	10070.1
P53678	P53678	AP3M2_RAT	Ap3m2	AP-3 complex subunit mu-2	1	TIEGVTVTSQMPK	TIEGVTVTSQMPK	2	TIEGVTVTSQMPK2	8624.76	4793.89	5043.63
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	TIEHLTYINHQLENEK	TIEHLTYINHQLENEK	3	TIEHLTYINHQLENEK3	2527.19	2561.46	2936.32
P10536	P70550;Q6NYB7;P10536;P35280	RAB1B_RAT	Rab1b	Ras-related protein Rab-1B	0	TIELDGK	TIELDGK	1	TIELDGK1	32493.1	22222.6	33935
P10536	P70550;Q6NYB7;P10536;P35280	RAB1B_RAT	Rab1b	Ras-related protein Rab-1B	0	TIELDGK	TIELDGK	2	TIELDGK2	1.63684e+06	1.55903e+06	1.96935e+06
P70550	P70550	RAB8B_RAT	Rab8b	Ras-related protein Rab-8B	1	TIELDGKK	TIELDGKK	2	TIELDGKK2	77425.9	72753	63997.8
P35280	P35280	RAB8A_RAT	Rab8a	Ras-related protein Rab-8A	1	TIELDGKR	TIELDGKR	2	TIELDGKR2	31927.4	27362.8	26691.5
O35094	O35094	TIM44_RAT	Timm44	Mitochondrial import inner membrane translocase subunit TIM44	1	TIESETVR	TIESETVR	2	TIESETVR2	51950.7	56055.8	55219.2
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	TIESILEPVAQQISHLVIMHEEGEVDGK	TIESILEPVAQQISHLVIMHEEGEVDGK	4	TIESILEPVAQQISHLVIMHEEGEVDGK4	266309	212463	245520
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	TIETEEVNK	TIETEEVNK	2	TIETEEVNK2	70049.5	75987.2	79478.2
Q562C6	Q562C6	LZTL1_RAT	Lztfl1	Leucine zipper transcription factor-like protein 1	1	TIETQAVNALDEK	TIETQAVNALDEK	2	TIETQAVNALDEK2	2550.66	4069.62	1936.65
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	TIEYLEEVAVNFAK	TIEYLEEVAVNFAK	2	TIEYLEEVAVNFAK2	38164.7	50454.8	69988.3
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	TIEYLEEVAVNFAK	TIEYLEEVAVNFAK	3	TIEYLEEVAVNFAK3	35919.9	52449.2	47237
O35964	O35179;O35964	SH3G1_RAT	Sh3gl1	Endophilin-A2	0	TIEYLQPNPASR	TIEYLQPNPASR	2	TIEYLQPNPASR2	242814	242458	251237
O35964	O35179;O35964	SH3G1_RAT	Sh3gl1	Endophilin-A2	0	TIEYLQPNPASR	TIEYLQPNPASR	3	TIEYLQPNPASR3	15333.5	15598.8	
D3ZEE4	D3ZEE4	D3ZEE4_RAT	Plxdc1	Plexin domain containing 1	1	TIFEYHR	TIFEYHR	2	TIFEYHR2	29648.7	33272.8	33690.9
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	TIFINQPQLTK	TIFINQPQLTK	2	TIFINQPQLTK2	92484.8	63904.1	103694
Q63448	Q63448	ACOX3_RAT	Acox3	Peroxisomal acyl-coenzyme A oxidase 3	1	TIFLDLIELQR	TIFLDLIELQR	2	TIFLDLIELQR2	11007.3	15430.3	13800.1
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	TIFQAIAAK	TIFQAIAAK	2	TIFQAIAAK2	164928	178351	140668
Q63448	Q63448	ACOX3_RAT	Acox3	Peroxisomal acyl-coenzyme A oxidase 3	1	TIFSTLENDPLFAR	TIFSTLENDPLFAR	2	TIFSTLENDPLFAR2	5270.86	7702.91	
Q63448	Q63448	ACOX3_RAT	Acox3	Peroxisomal acyl-coenzyme A oxidase 3	1	TIFSTLENDPLFARPFGADLPLEK	TIFSTLENDPLFARPFGADLPLEK	3	TIFSTLENDPLFARPFGADLPLEK3		3838.44	6660.38
A0A0G2K3Y6	A0A0G2K3Y6;D4AD99;D3ZHK8	A0A0G2K3Y6_RAT	Cpeb4	Cytoplasmic polyadenylation element binding protein 4	0	TIFVGGVPRPLR	TIFVGGVPRPLR	3	TIFVGGVPRPLR3	27945	15888.8	26068.4
Q2TA68	Q2TA68;A5H300	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	0	TIFVLTK	TIFVLTK	2	TIFVLTK2	228398	203873	221859
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	TIGATYMAASGLNTAQCQEGGHPQEHLR	TIGATYMAASGLNTAQC(UniMod:4)QEGGHPQEHLR	4	TIGATYMAASGLNTAQC(UniMod:4)QEGGHPQEHLR4	4759.18	4822.33	4290.61
G3V8Y8	G3V8Y8	G3V8Y8_RAT	Hip1	Huntingtin interacting protein 1	1	TIGEELLPR	TIGEELLPR	2	TIGEELLPR2	15230.3	16642.3	15778.8
Q6AYZ1	A0A8I6AF82;P68370;Q68FR8;Q6AYZ1;Q6P9V9	TBA1C_RAT	Tuba1c	Tubulin alpha-1C chain	0	TIGGGDDSFNTFFSETGAGK	TIGGGDDSFNTFFSETGAGK	3	TIGGGDDSFNTFFSETGAGK3	1.19491e+06	1.28227e+06	1.48589e+06
Q5XIF6	Q5XIF6	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	1	TIGGGDDSFTTFFCETGAGK	TIGGGDDSFTTFFC(UniMod:4)ETGAGK	3	TIGGGDDSFTTFFC(UniMod:4)ETGAGK3	1.18574e+06	1.3318e+06	1.53791e+06
Q5XIF6	Q5XIF6	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	1	TIGGGDDSFTTFFCETGAGKHVPR	TIGGGDDSFTTFFC(UniMod:4)ETGAGKHVPR	4	TIGGGDDSFTTFFC(UniMod:4)ETGAGKHVPR4	11609.1	10115.4	10142.8
Q80VJ4	Q80VJ4	GPCP1_RAT	Gpcpd1	Glycerophosphocholine phosphodiesterase GPCPD1	1	TIGGPCQVIVHK	TIGGPC(UniMod:4)QVIVHK	3	TIGGPC(UniMod:4)QVIVHK3	18523.6	28746.5	19070.6
Q64542	Q64542	AT2B4_RAT	Atp2b4	Plasma membrane calcium-transporting ATPase 4	1	TIGIAYR	TIGIAYR	2	TIGIAYR2	31415.5	29016.3	27012.4
P41123	F1M2E9;A0A8I5ZNK4;P41123	RL13_RAT	Rpl13	Large ribosomal subunit protein eL13	0	TIGISVDPR	TIGISVDPR	2	TIGISVDPR2	37764.9	40799.7	37928.3
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	TIGNLIAR	TIGNLIAR	2	TIGNLIAR2	46629.5	55911.5	52782.6
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	TIGSTYMAASGLNASTYDQVGR	TIGSTYMAASGLNASTYDQVGR	3	TIGSTYMAASGLNASTYDQVGR3	35992.7	37867.6	33088.4
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	TIGTGLVTDVPAMTEEDK	TIGTGLVTDVPAMTEEDK	2	TIGTGLVTDVPAMTEEDK2	27087.6	20630	19974.2
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	TIGTGLVTDVPAMTEEDKNIK	TIGTGLVTDVPAMTEEDKNIK	3	TIGTGLVTDVPAMTEEDKNIK3	173626	182238	185200
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	TIGVAAK	TIGVAAK	1	TIGVAAK1	1257.59		
D3ZRM5	D3ZRM5	D3ZRM5_RAT	Rab23	RAB23, member RAS oncogene family	1	TIGVDFLER	TIGVDFLER	2	TIGVDFLER2	6422.46		5404.26
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	TIGVMIMVHGDNMGLVLPPR	TIGVMIMVHGDNMGLVLPPR	3	TIGVMIMVHGDNMGLVLPPR3	5750.83	11099.7	
Q3B7U9	Q3B7U9	FKBP8_RAT	Fkbp8	Peptidyl-prolyl cis-trans isomerase FKBP8	1	TIHAELSK	TIHAELSK	2	TIHAELSK2	26686.2	22742.2	34006.8
D4A1A5	A0A8I6A6K6;D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	0	TIHGLIYNALK	TIHGLIYNALK	2	TIHGLIYNALK2	55823.2	50480	37029
D4A1A5	A0A8I6A6K6;D4A1A5	D4A1A5_RAT	Ppp2r5c	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit	0	TIHGLIYNALK	TIHGLIYNALK	3	TIHGLIYNALK3	53664.7	52215.6	55591.7
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	TIHGVGEMMTQMVLSR	TIHGVGEMMTQMVLSR	3	TIHGVGEMMTQMVLSR3	12788.4	13511.9	12963.9
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	TIHLSSIRPPR	TIHLSSIRPPR	3	TIHLSSIRPPR3	67332.2	33321	60816.3
Q6AYS7	Q6AYS7	ACY1A_RAT	Acy1a	Aminoacylase-1A	1	TIHMTFVPDEEVGGHK	TIHMTFVPDEEVGGHK	4	TIHMTFVPDEEVGGHK4	2241.86	2547.99	
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	TIHRPPYEMVK	TIHRPPYEMVK	3	TIHRPPYEMVK3	77224.9	80050.1	79954.8
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	TIHSYQGQVISHEK	TIHSYQGQVISHEK	3	TIHSYQGQVISHEK3	14610	8394.83	10197.9
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	TIHSYQGQVISHEK	TIHSYQGQVISHEK	4	TIHSYQGQVISHEK4	4831.38	6132.68	10339.6
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	TIICINGDWSEPPK	TIIC(UniMod:4)INGDWSEPPK	2	TIIC(UniMod:4)INGDWSEPPK2	363192	285374	244720
A0A8I6ATZ0	Q5FVP9;A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	0	TIICINGEWSDPPK	TIIC(UniMod:4)INGEWSDPPK	2	TIIC(UniMod:4)INGEWSDPPK2	181476	143634	115849
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	TIIDMSSANGVDYVIMGMPHR	TIIDMSSANGVDYVIMGMPHR	3	TIIDMSSANGVDYVIMGMPHR3	69806.6	73967.3	74317.4
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	TIIEDAKK	TIIEDAKK	2	TIIEDAKK2	84411.3	62199.6	75920.9
A0A8I5ZRU1	A0A8I5ZRU1;Q9QYK3;A0A8I6GHP4	A0A8I5ZRU1_RAT	LOC100363472	Nuclear receptor-binding factor 2-like	0	TIIEEQATK	TIIEEQATK	2	TIIEEQATK2	9927.86	14726.1	13407.9
Q925Q9	Q925Q9	SH3K1_RAT	Sh3kbp1	SH3 domain-containing kinase-binding protein 1	1	TIIETMK	TIIETMK	2	TIIETMK2	19878.7	15358.3	18298.9
Q925Q9	Q925Q9	SH3K1_RAT	Sh3kbp1	SH3 domain-containing kinase-binding protein 1	1	TIIETMKDQQK	TIIETMKDQQK	3	TIIETMKDQQK3	15492.9	10250.2	15666.2
Q80W57	Q80W57	ABCG2_RAT	Abcg2	Broad substrate specificity ATP-binding cassette transporter ABCG2	1	TIIFSIHQPR	TIIFSIHQPR	3	TIIFSIHQPR3	10515.7	9762.92	10298.3
A0A8I6A0D0	A0A8I6A0D0;Q498U1;A0A8I5ZW97	A0A8I6A0D0_RAT	Abcg3	ATP-binding cassette, subfamily G (WHITE), member 3	0	TIIFSINQPQYSIFR	TIIFSINQPQYSIFR	2	TIIFSINQPQYSIFR2	7990.35	6029.45	7583.01
F7F350	F7F350	F7F350_RAT	Syap1	Synapse associated protein 1	1	TIIGDFQK	TIIGDFQK	2	TIIGDFQK2	282798	285609	256284
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	TIIIHHEAIFPSPR	TIIIHHEAIFPSPR	3	TIIIHHEAIFPSPR3	13669.1	30360.6	27672.6
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	TIIIHHEAIFPSPR	TIIIHHEAIFPSPR	4	TIIIHHEAIFPSPR4	36222.9	25251.7	37908.3
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	TIIIQHENIFPNPR	TIIIQHENIFPNPR	3	TIIIQHENIFPNPR3	64343.4	68301.3	50979.3
A0A8I5ZYN9	A0A8I5ZYN9	A0A8I5ZYN9_RAT	Ipo11-ps1	Similar to importin 11	1	TIILFTK	TIILFTK	2	TIILFTK2	15611.9	21554.5	
A0A8I6A0T5	A0A8I6A0T5	A0A8I6A0T5_RAT	Dctn5	Dynactin subunit 5	1	TIIMNDCIIR	TIIMNDC(UniMod:4)IIR	2	TIIMNDC(UniMod:4)IIR2	45223.4	38305.6	39563.2
P63100	P63100	CANB1_RAT	Ppp3r1	Calcineurin subunit B type 1	1	TIINADKDGDGR	TIINADKDGDGR	2	TIINADKDGDGR2	16798.2	18273	5776.49
P63100	P63100	CANB1_RAT	Ppp3r1	Calcineurin subunit B type 1	1	TIINADKDGDGR	TIINADKDGDGR	3	TIINADKDGDGR3	225868	283274	227168
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	TIIPLISQCTPK	TIIPLISQC(UniMod:4)TPK	2	TIIPLISQC(UniMod:4)TPK2	1.73082e+06	1.67853e+06	1.79797e+06
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	TIIPLISQCTPK	TIIPLISQC(UniMod:4)TPK	3	TIIPLISQC(UniMod:4)TPK3	12637.9	7133.68	18072.3
Q6AYD3	Q6AYD3	PA2G4_RAT	Pa2g4	Proliferation-associated protein 2G4	1	TIIQNPTDQQK	TIIQNPTDQQK	2	TIIQNPTDQQK2	43424.5	39924.5	29784.2
D3ZWC6	D3ZWC6	D3ZWC6_RAT	Sntb1	Syntrophin, beta 1	1	TIIQSPYEK	TIIQSPYEK	2	TIIQSPYEK2	256916	201932	225265
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	TIISLDTSQMNR	TIISLDTSQMNR	2	TIISLDTSQMNR2	25769.7	30833.4	27859.7
Q91Y81	Q91Y81	SEPT2_RAT	Septin2	Septin-2	1	TIISYIDEQFER	TIISYIDEQFER	2	TIISYIDEQFER2	99810.4	64231.2	60144.3
P82471	P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	1	TIITYPWFQNSSVILFLNK	TIITYPWFQNSSVILFLNK	3	TIITYPWFQNSSVILFLNK3	2901.01	6063.53	
P82471	P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	1	TIITYPWFQNSSVILFLNKK	TIITYPWFQNSSVILFLNKK	3	TIITYPWFQNSSVILFLNKK3	56236.8	45173.5	49869.6
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	TIIVNWQPPSEANGK	TIIVNWQPPSEANGK	2	TIIVNWQPPSEANGK2	56244.4	53429.7	63247.8
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	TIIVNWQPPSEANGK	TIIVNWQPPSEANGK	3	TIIVNWQPPSEANGK3	7291.42	10919.7	
Q62720	Q62720	ZNT1_RAT	Slc30a1	Proton-coupled zinc antiporter SLC30A1	1	TIKDVFHNHGIHATTIQPEFASVGSK	TIKDVFHNHGIHATTIQPEFASVGSK	4	TIKDVFHNHGIHATTIQPEFASVGSK4		9970.34	15540.5
Q9EP80	Q9EP80	PICK1_RAT	Pick1	PRKCA-binding protein	1	TIKPMLTDLNTYLNK	TIKPMLTDLNTYLNK	3	TIKPMLTDLNTYLNK3	5622.33	3800.31	6311.8
Q9JHX4	Q9JHX4	CASP8_RAT	Casp8	Caspase-8	1	TILAENNLVTLK	TILAENNLVTLK	2	TILAENNLVTLK2	8905.3	1578.42	5715.29
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	TILAETEGMLK	TILAETEGMLK	2	TILAETEGMLK2	132937	126250	143863
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	TILALMK	TILALMK	2	TILALMK2	281207	254114	279095
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	TILALNHGLDK	TILALNHGLDK	2	TILALNHGLDK2	85594.8	99588	58435.4
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	TILALNHGLDK	TILALNHGLDK	3	TILALNHGLDK3	110279	120487	108649
F1M1H0	F1M1H0	F1M1H0_RAT	Dera	deoxyribose-phosphate aldolase	1	TILATGELGSLTNIYK	TILATGELGSLTNIYK	2	TILATGELGSLTNIYK2	20470.3	17685.9	15533.5
Q5BJR4	Q5BJR4	PRUN2_RAT	Prune2	Protein prune homolog 2	1	TILAVTRPFISSK	TILAVTRPFISSK	3	TILAVTRPFISSK3	74144.3	76811.5	75398.6
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	TILAYSEEDTAMR	TILAYSEEDTAMR	2	TILAYSEEDTAMR2	42760.6	41428.5	42323.3
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	TILDDLR	TILDDLR	2	TILDDLR2	4.11632e+07	4.4262e+07	4.08922e+07
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	TILDDLRTEDQFSVVDFNHNVR	TILDDLRTEDQFSVVDFNHNVR	3	TILDDLRTEDQFSVVDFNHNVR3	28627.1	35235	28779.6
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	TILDDLRTEDQFSVVDFNHNVR	TILDDLRTEDQFSVVDFNHNVR	4	TILDDLRTEDQFSVVDFNHNVR4	43025.5	34321.1	35130.5
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	TILEDEK	TILEDEK	1	TILEDEK1	3077.28	3781.61	2000.96
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	TILEDEK	TILEDEK	2	TILEDEK2	129274	186692	160057
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	TILEMILGFLK	TILEMILGFLK	2	TILEMILGFLK2		11067.8	6504.89
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	TILESNDVPGMLAYSLK	TILESNDVPGMLAYSLK	2	TILESNDVPGMLAYSLK2	15748.3	15234.9	21380.1
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	TILESNDVPGMLAYSLK	TILESNDVPGMLAYSLK	3	TILESNDVPGMLAYSLK3	4534.89	2653.85	
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	TILETSFHQHR	TILETSFHQHR	2	TILETSFHQHR2	4477.72	2625.66	2529.47
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	TILETSFHQHR	TILETSFHQHR	3	TILETSFHQHR3	385903	377573	401348
A0A8I5ZWR1	A0A8I5ZWR1	A0A8I5ZWR1_RAT	ENSRNOG00000069249	Ig-like domain-containing protein	1	TILEVMYK	TILEVMYK	2	TILEVMYK2	66589.4	62246.6	46420.6
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TILFDTFVNDVAPVEK	TILFDTFVNDVAPVEK	2	TILFDTFVNDVAPVEK2	393963	594885	507731
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TILFDTFVNDVAPVEK	TILFDTFVNDVAPVEK	3	TILFDTFVNDVAPVEK3	21641.9	47412.7	30752.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TILFDTFVNDVAPVEKR	TILFDTFVNDVAPVEKR	3	TILFDTFVNDVAPVEKR3	125124	175229	151120
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	TILFGVK	TILFGVK	2	TILFGVK2	18544.4	11978.6	25686.6
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	TILFVGR	TILFVGR	2	TILFVGR2	210215	182112	185510
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	TILGAGPVLEAFGNAK	TILGAGPVLEAFGNAK	2	TILGAGPVLEAFGNAK2	48466.8	60425.9	57374
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	TILGAGPVLEAFGNAK	TILGAGPVLEAFGNAK	3	TILGAGPVLEAFGNAK3	3671.18	3445.82	
F7FGS9	F7FGS9	F7FGS9_RAT	Marchf5	Membrane associated ring-CH-type finger 5	1	TILGGIAFVAIK	TILGGIAFVAIK	2	TILGGIAFVAIK2	2522.42		5602.8
Q03346	Q03346	MPPB_RAT	Pmpcb	Mitochondrial-processing peptidase subunit beta	1	TILGPTENIK	TILGPTENIK	2	TILGPTENIK2	52353	43676.2	47479.6
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	TILGTVNLTIK	TILGTVNLTIK	2	TILGTVNLTIK2	105682	60630.3	56012.6
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	TILLNTK	TILLNTK	2	TILLNTK2	105605	104087	
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	TILMMGR	TILMMGR	2	TILMMGR2	260973	232668	238111
D3ZLN7	D3ZLN7	D3ZLN7_RAT	Commd2	COMM domain containing 2	1	TILNELAPR	TILNELAPR	2	TILNELAPR2	21162.7	14968.8	11265.2
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	TILPAAAQDVYYR	TILPAAAQDVYYR	2	TILPAAAQDVYYR2	126317	91882.2	96511.7
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	TILPGGVADQHGR	TILPGGVADQHGR	3	TILPGGVADQHGR3	32017.3	50081.8	45573.2
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	TILPHGASFHGHLLTLNVTYESTK	TILPHGASFHGHLLTLNVTYESTK	4	TILPHGASFHGHLLTLNVTYESTK4	5191.13	4542.47	4839.61
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	TILPLVNFK	TILPLVNFK	2	TILPLVNFK2	224243	200225	211320
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	TILPMSR	TILPMSR	2	TILPMSR2	198272	245412	202704
Q6IRJ7	Q6IRJ7	Q6IRJ7_RAT	Anxa7	Annexin	1	TILQCALNR	TILQC(UniMod:4)ALNR	2	TILQC(UniMod:4)ALNR2	16013.6	16297	17653.9
Q6IRJ7	Q6IRJ7	Q6IRJ7_RAT	Anxa7	Annexin	1	TILQCALNRPAFFAER	TILQC(UniMod:4)ALNRPAFFAER	3	TILQC(UniMod:4)ALNRPAFFAER3	44598.5	43004.7	48631.5
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	TILQVVAR	TILQVVAR	2	TILQVVAR2	29458.6	26284.6	22572.6
P51792	P51796;P51792;P51794	CLCN3_RAT	Clcn3	H(+)/Cl(-) exchange transporter 3	0	TILSGFIIR	TILSGFIIR	2	TILSGFIIR2	20078.5	24415.9	15936.3
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	TILSLMTR	TILSLMTR	2	TILSLMTR2	76140.3	76124.8	80451
P17077	A0A0G2JXD0;P17077	RL9_RAT	Rpl9	Large ribosomal subunit protein uL6	0	TILSNQTVDIPENVDITLK	TILSNQTVDIPENVDITLK	3	TILSNQTVDIPENVDITLK3	9811.15	8036.27	4909.7
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	TILTTSHAFPYIK	TILTTSHAFPYIK	3	TILTTSHAFPYIK3	80896.7	71044.2	74632.9
D4A740	D4A740	D4A740_RAT	Il17ra	Interleukin 17 receptor A	1	TILVPGCEDTEMK	TILVPGC(UniMod:4)EDTEMK	2	TILVPGC(UniMod:4)EDTEMK2	19126.1	12090.6	12276.2
Q5XIJ6	Q5XIJ6	BABA1_RAT	Babam1	BRISC and BRCA1-A complex member 1	1	TILVYSRPPCQPQFSLTEPMK	TILVYSRPPC(UniMod:4)QPQFSLTEPMK	3	TILVYSRPPC(UniMod:4)QPQFSLTEPMK3	20015.1	9384.17	25242.8
Q5XIJ6	Q5XIJ6	BABA1_RAT	Babam1	BRISC and BRCA1-A complex member 1	1	TILVYSRPPCQPQFSLTEPMKK	TILVYSRPPC(UniMod:4)QPQFSLTEPMKK	3	TILVYSRPPC(UniMod:4)QPQFSLTEPMKK3	2719.83	6613.69	6000.1
Q5XIJ6	Q5XIJ6	BABA1_RAT	Babam1	BRISC and BRCA1-A complex member 1	1	TILVYSRPPCQPQFSLTEPMKK	TILVYSRPPC(UniMod:4)QPQFSLTEPMKK	4	TILVYSRPPC(UniMod:4)QPQFSLTEPMKK4	16400.2	7080.11	14920.3
P10683	P10683	GALA_RAT	Gal	Galanin peptides	1	TIMEFLSFLHLK	TIMEFLSFLHLK	3	TIMEFLSFLHLK3	5140.68	7523.44	8622.12
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	TIMELLCR	TIMELLC(UniMod:4)R	2	TIMELLC(UniMod:4)R2	33328.1	34113.2	28605.1
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	TIMELLCRPSK	TIMELLC(UniMod:4)RPSK	3	TIMELLC(UniMod:4)RPSK3	74701.9	71214	70008.3
Q6P7R8	Q6P7R8	DHB12_RAT	Hsd17b12	Very-long-chain 3-oxoacyl-CoA reductase	1	TIMGFNK	TIMGFNK	2	TIMGFNK2	107356	85750.1	75366.6
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	TIMHDPFAMR	TIMHDPFAMR	3	TIMHDPFAMR3	20835.6	19877.1	31950.9
P39052	P39052;P21575	DYN2_RAT	Dnm2	Dynamin-2	0	TIMHLMINNTK	TIMHLMINNTK	2	TIMHLMINNTK2	9232.55	6157.91	
P39052	P39052;P21575	DYN2_RAT	Dnm2	Dynamin-2	0	TIMHLMINNTK	TIMHLMINNTK	3	TIMHLMINNTK3	93225.9	90648	89335
F7EUW3	F7EUW3	F7EUW3_RAT	C2cd2l	C2CD2-like	1	TIMPDGTIVTTVTTVQSR	TIMPDGTIVTTVTTVQSR	3	TIMPDGTIVTTVTTVQSR3	19199.7	15859.4	18636.6
F7EUW3	F7EUW3	F7EUW3_RAT	C2cd2l	C2CD2-like	1	TIMPDGTIVTTVTTVQSRPR	TIMPDGTIVTTVTTVQSRPR	3	TIMPDGTIVTTVTTVQSRPR3	9584.24	12129.7	28175.3
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TIMVDDSK	TIMVDDSK	1	TIMVDDSK1	19394.6	20079.5	19250.8
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TIMVDDSK	TIMVDDSK	2	TIMVDDSK2	2.7535e+06	3.18095e+06	3.64578e+06
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	TIMVNYNPETVSTDYDMCDR	TIMVNYNPETVSTDYDMC(UniMod:4)DR	3	TIMVNYNPETVSTDYDMC(UniMod:4)DR3	2742.81		3225.03
A0A8I5ZUS1	A0A8I5ZUS1	A0A8I5ZUS1_RAT	Map3k4	Mitogen activated protein kinase kinase kinase 4	1	TINDQDLFLYTAR	TINDQDLFLYTAR	2	TINDQDLFLYTAR2	5345.26	5187.8	2726.26
Q01205	Q01205	ODO2_RAT	Dlst	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial	1	TINELGEK	TINELGEK	1	TINELGEK1	2017.92	954.283	2784.75
Q01205	Q01205	ODO2_RAT	Dlst	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial	1	TINELGEK	TINELGEK	2	TINELGEK2	330140	355599	381798
Q9Z1P2	Q9QXQ0;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	TINEVENQILTR	TINEVENQILTR	2	TINEVENQILTR2	5.59795e+06	6.26273e+06	5.86783e+06
Q9Z1P2	Q9QXQ0;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	TINEVENQILTR	TINEVENQILTR	3	TINEVENQILTR3	965497	1.15961e+06	1.06225e+06
D4A9G5	D4A9G5	D4A9G5_RAT	Dpy19l3	Dpy-19 like C-mannosyltransferase 3	1	TINLLQR	TINLLQR	2	TINLLQR2	8444.8	12755.4	11581.2
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	TINLYYNNR	TINLYYNNR	2	TINLYYNNR2	46133.5	53034.7	58076.4
P36953	P36953	AFAM_RAT	Afm	Afamin	1	TINPTVDHCCR	TINPTVDHC(UniMod:4)C(UniMod:4)R	2	TINPTVDHC(UniMod:4)C(UniMod:4)R2	94112.3	72662.7	62040.4
P36953	P36953	AFAM_RAT	Afm	Afamin	1	TINPTVDHCCR	TINPTVDHC(UniMod:4)C(UniMod:4)R	3	TINPTVDHC(UniMod:4)C(UniMod:4)R3	302224	324831	362153
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	TINSWMNTMVPK	TINSWMNTMVPK	2	TINSWMNTMVPK2	149587	97487.9	124312
P09215	P09215	KPCD_RAT	Prkcd	Protein kinase C delta type	1	TINWNLLEK	TINWNLLEK	2	TINWNLLEK2	37291.8	37022.7	36024.4
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	TIPAEANIPIPVKPDMVMMHGHHK	TIPAEANIPIPVKPDMVMMHGHHK	4	TIPAEANIPIPVKPDMVMMHGHHK4	15837.6	19178.5	10303.6
Q9WVH8	Q9WVH8	FBLN5_RAT	Fbln5	Fibulin-5	1	TIPEACR	TIPEAC(UniMod:4)R	2	TIPEAC(UniMod:4)R2	1.55094e+06	1.65046e+06	1.68451e+06
D3ZUQ1	D3ZUQ1	D3ZUQ1_RAT	Lipo1	Lipase	1	TIPEFSHLDFIVGLNAK	TIPEFSHLDFIVGLNAK	2	TIPEFSHLDFIVGLNAK2	212871	221839	153756
D3ZUQ1	D3ZUQ1	D3ZUQ1_RAT	Lipo1	Lipase	1	TIPEFSHLDFIVGLNAK	TIPEFSHLDFIVGLNAK	3	TIPEFSHLDFIVGLNAK3	411223	317704	259376
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	TIPHHQYNATINK	TIPHHQYNATINK	2	TIPHHQYNATINK2	751.511		
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	TIPHHQYNATINK	TIPHHQYNATINK	3	TIPHHQYNATINK3	68918.8	79769.2	64955.3
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	TIPIDGDFFSYTR	TIPIDGDFFSYTR	2	TIPIDGDFFSYTR2	399239	466505	549342
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	TIPIKYPLK	TIPIKYPLK	2	TIPIKYPLK2	43651.9	38780	38537.5
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	TIPLKDVLK	TIPLKDVLK	2	TIPLKDVLK2	49822.8	63509.2	55660.7
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	TIPLSSGIMSSALPADYLVEINK	TIPLSSGIMSSALPADYLVEINK	3	TIPLSSGIMSSALPADYLVEINK3	8880.28	12249.2	12727
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	TIPNDPGFVVTLSNR	TIPNDPGFVVTLSNR	2	TIPNDPGFVVTLSNR2	53226.1	44590.1	43938.4
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	TIPWLEDR	TIPWLEDR	2	TIPWLEDR2	1.11799e+06	1.05307e+06	1.06784e+06
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	TIPWLEDRVPQK	TIPWLEDRVPQK	2	TIPWLEDRVPQK2	83702.9	85965.7	115601
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	TIPWLEDRVPQK	TIPWLEDRVPQK	3	TIPWLEDRVPQK3	512770	624875	633677
Q9Z1P2	A0A8I5ZN92;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	TIPWLENR	TIPWLENR	2	TIPWLENR2	7.58376e+06	8.09016e+06	8.77807e+06
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	TIPWLENRVPENTMQAMQQK	TIPWLENRVPENTMQAMQQK	3	TIPWLENRVPENTMQAMQQK3	560361	1.02282e+06	1.06068e+06
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	TIPYSDK	TIPYSDK	2	TIPYSDK2	155885	142008	160952
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	TIQAHDVGGYYYEK	TIQAHDVGGYYYEK	3	TIQAHDVGGYYYEK3	11221.6	18647.9	12523.8
A0A8J8XL70	A0A8J8XL70	A0A8J8XL70_RAT	Serpinf1	Serpin family F member 1	1	TIQAVLTVPK	TIQAVLTVPK	2	TIQAVLTVPK2	64643.1	46391.8	46488.7
Q810F4	Q810F4	FAM3C_RAT	Fam3c	Protein FAM3C	1	TIQDGTVVLMATYDDGATK	TIQDGTVVLMATYDDGATK	3	TIQDGTVVLMATYDDGATK3		4811	2466.46
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	TIQEEEDIK	TIQEEEDIK	2	TIQEEEDIK2	90690.7	121519	120727
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	TIQEMQQK	TIQEMQQK	2	TIQEMQQK2	1.42121e+06	1.2251e+06	794150
Q6AY56	P68370;Q68FR8;Q6AYZ1;Q6AY56	TBA8_RAT	Tuba8	Tubulin alpha-8 chain	0	TIQFVDWCPTGFK	TIQFVDWC(UniMod:4)PTGFK	2	TIQFVDWC(UniMod:4)PTGFK2	6.03214e+06	5.93377e+06	6.04009e+06
Q6AY56	P68370;Q68FR8;Q6AYZ1;Q6AY56	TBA8_RAT	Tuba8	Tubulin alpha-8 chain	0	TIQFVDWCPTGFK	TIQFVDWC(UniMod:4)PTGFK	3	TIQFVDWC(UniMod:4)PTGFK3	506596	504485	496986
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	TIQGDEEDLR	TIQGDEEDLR	2	TIQGDEEDLR2	458651	325661	434381
P37727	P37727	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	1	TIQHVEVFCYASQDLHK	TIQHVEVFC(UniMod:4)YASQDLHK	3	TIQHVEVFC(UniMod:4)YASQDLHK3		3375.17	3021.6
P37727	P37727	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	1	TIQHVEVFCYASQDLHK	TIQHVEVFC(UniMod:4)YASQDLHK	4	TIQHVEVFC(UniMod:4)YASQDLHK4	17103.4	28682.5	23830.2
P20607	P20607	IL6_RAT	Il6	Interleukin-6	1	TIQLILK	TIQLILK	2	TIQLILK2	20235.5	20498.6	6848.52
P29147	P29147	BDH_RAT	Bdh1	D-beta-hydroxybutyrate dehydrogenase, mitochondrial	1	TIQLNVCNSEEVEK	TIQLNVC(UniMod:4)NSEEVEK	2	TIQLNVC(UniMod:4)NSEEVEK2	4563.69	4703.9	5647.88
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	TIQLYAVK	TIQLYAVK	2	TIQLYAVK2	25368.7	33825.7	22676.8
A0JN30	A0JN30	A0JN30_RAT	Cnpy2	Canopy FGF signaling regulator 2	1	TIQMGSFR	TIQMGSFR	2	TIQMGSFR2	73279.9	60660.5	63449.6
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	TIQNAGYGAK	TIQNAGYGAK	2	TIQNAGYGAK2	42993.6	48956.9	39223.3
A0A8I6GJC5	A0A8I6GJC5	A0A8I6GJC5_RAT	Reps1	RALBP1 associated Eps domain containing 1	1	TIQPDLNGFIPGSAAK	TIQPDLNGFIPGSAAK	2	TIQPDLNGFIPGSAAK2	19596.5	11618.1	21305.3
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	TIQQNITEQASVMQK	TIQQNITEQASVMQK	2	TIQQNITEQASVMQK2	1381.34	3725.16	
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	TIQQNITEQASVMQK	TIQQNITEQASVMQK	3	TIQQNITEQASVMQK3	1519.14	4429.65	3684.63
A0A0G2JUG7	A0A8I6GKX8;A0A0G2JUG7	IQEC1_RAT	Iqsec1	IQ motif and SEC7 domain-containing protein 1	0	TIQTAFR	TIQTAFR	2	TIQTAFR2	15008.5	13815.7	10951.3
Q68FS4	A0A8I6B0E2;Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	0	TIQVDNTDAEGR	TIQVDNTDAEGR	2	TIQVDNTDAEGR2	50044	30182.1	50578.8
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	TIQVENSHLILTGAGALNK	TIQVENSHLILTGAGALNK	3	TIQVENSHLILTGAGALNK3	2765.72	2620.43	
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	TIQVEVYSFPEDPEIEISGPLVHGR	TIQVEVYSFPEDPEIEISGPLVHGR	3	TIQVEVYSFPEDPEIEISGPLVHGR3	24600.5	22403.8	24747.4
Q66H94	Q66H94	FKBP9_RAT	Fkbp9	Peptidyl-prolyl cis-trans isomerase FKBP9	1	TIQVSDFVR	TIQVSDFVR	2	TIQVSDFVR2	20376.2	18070.6	26864.5
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	TIRDIIALNPLYR	TIRDIIALNPLYR	3	TIRDIIALNPLYR3	2652.81	2287.98	14593.8
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	TIRDLEVVEGSAAR	TIRDLEVVEGSAAR	3	TIRDLEVVEGSAAR3	79312.9	151700	165503
P49432	P49432	ODPB_RAT	Pdhb	Pyruvate dehydrogenase E1 component subunit beta, mitochondrial	1	TIRPMDIEAIEASVMK	TIRPMDIEAIEASVMK	3	TIRPMDIEAIEASVMK3	95063.2	101059	78449.9
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	TIRPNSAVR	TIRPNSAVR	2	TIRPNSAVR2	2945.37	2972.27	
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	TISAQPSGPSHR	TISAQPSGPSHR	2	TISAQPSGPSHR2	24106.6	36161.9	39312.8
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	TISAQPSGPSHR	TISAQPSGPSHR	3	TISAQPSGPSHR3	68288.5	67669.2	84122.4
A0A8I6GBT2;M0R766	A0A8I6GBT2;M0R766	A0A8I6GBT2_RAT;M0R766_RAT	AABR07006081.1;Tvp23b	Golgi apparatus membrane protein TVP23 homolog	0	TISEAESR	TISEAESR	2	TISEAESR2	17236.1		
A0A8I5ZV26	A0A8I5ZV26	A0A8I5ZV26_RAT	Stom	Stomatin	1	TISFDIPPQEVLTK	TISFDIPPQEVLTK	2	TISFDIPPQEVLTK2	524791	467200	524858
Q32Q06	Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	1	TISFIPPDGEFELMSYR	TISFIPPDGEFELMSYR	3	TISFIPPDGEFELMSYR3	13391.8	10502.9	11814.9
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	TISFQSR	TISFQSR	2	TISFQSR2	76957.3	76657	64818.3
P60123	A0A0G2K0H9;P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	0	TISHVIIGLK	TISHVIIGLK	2	TISHVIIGLK2	13162.5	15751.9	13832.1
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	TISIWHVLPDDK	TISIWHVLPDDK	3	TISIWHVLPDDK3	6233.64	4727.99	
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	TISIWHVLPDDKK	TISIWHVLPDDKK	3	TISIWHVLPDDKK3			6074.38
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	TISIWHVLPDDKK	TISIWHVLPDDKK	4	TISIWHVLPDDKK4	12090.2	12464.4	19341.1
P20759	P20759	IGHG1_RAT		Ig gamma-1 chain C region	1	TISKPEGR	TISKPEGR	2	TISKPEGR2			313054
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	TISLDYK	TISLDYK	2	TISLDYK2	25352.6	21346.2	
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	TISLSSLEPR	TISLSSLEPR	2	TISLSSLEPR2	273714	341564	300736
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	TISMVNCGPPLR	TISMVNC(UniMod:4)GPPLR	2	TISMVNC(UniMod:4)GPPLR2	18802.1	14919.1	14227.2
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	TISNFSQDIKDSK	TISNFSQDIKDSK	3	TISNFSQDIKDSK3	16943.5	8552.79	12362
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TISPDVR	TISPDVR	1	TISPDVR1	37114.3	52681.3	31781.3
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TISPDVR	TISPDVR	2	TISPDVR2	324851	396248	5.15826e+07
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	TISPMVMDAK	TISPMVMDAK	2	TISPMVMDAK2	1.42544e+06	1.24598e+06	1.28647e+06
Q66H12	Q66H12	NAGAB_RAT	Naga	Alpha-N-acetylgalactosaminidase	1	TISPQNIDILQNPLLIK	TISPQNIDILQNPLLIK	2	TISPQNIDILQNPLLIK2		5191.82	4256.33
Q66H12	Q66H12	NAGAB_RAT	Naga	Alpha-N-acetylgalactosaminidase	1	TISPQNIDILQNPLLIK	TISPQNIDILQNPLLIK	3	TISPQNIDILQNPLLIK3	6374.14	3163.99	5480.5
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	TISQAVNKK	TISQAVNKK	2	TISQAVNKK2	15696.1		7164.26
Q6AY82	Q6AY82	MUCEN_RAT	Emcn	Endomucin	1	TISQIQDTEDGK	TISQIQDTEDGK	2	TISQIQDTEDGK2	20660.1	15111.7	10451.7
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	TISQVFEMDIAK	TISQVFEMDIAK	2	TISQVFEMDIAK2	27083.5	35730.3	43409.3
A0A8I5ZNG4	A0A8I5ZNG4	A0A8I5ZNG4_RAT	Rictor	RPTOR independent companion of MTOR, complex 2	1	TISSEALDILDEACEDK	TISSEALDILDEAC(UniMod:4)EDK	2	TISSEALDILDEAC(UniMod:4)EDK2	3441.8	2319.66	
A0A8I5ZNG4	A0A8I5ZNG4	A0A8I5ZNG4_RAT	Rictor	RPTOR independent companion of MTOR, complex 2	1	TISSEALDILDEACEDK	TISSEALDILDEAC(UniMod:4)EDK	3	TISSEALDILDEAC(UniMod:4)EDK3	4071.93	6318.5	5249.39
P98166	P98166	VLDLR_RAT	Vldlr	Very low-density lipoprotein receptor	1	TISVATLDGTK	TISVATLDGTK	2	TISVATLDGTK2	8716.35	12676.1	7879.06
Q5EB77	A0A8I5ZQR4;Q5EB77	RAB18_RAT	Rab18	Ras-related protein Rab-18	0	TISVDGNK	TISVDGNK	1	TISVDGNK1		2110.45	3720.5
Q5EB77	A0A8I5ZQR4;Q5EB77	RAB18_RAT	Rab18	Ras-related protein Rab-18	0	TISVDGNK	TISVDGNK	2	TISVDGNK2	332764	309991	359248
Q63803	Q63803	GNAS1_RAT	Gnas	Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas	1	TISVILFLNK	TISVILFLNK	2	TISVILFLNK2	24901.2	23789.7	18600.6
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	TITAATLQFTEGK	TITAATLQFTEGK	2	TITAATLQFTEGK2	52239.7	69460	59324.7
A0A0G2KA82	A0A0G2KA82	A0A0G2KA82_RAT	Sypl1	Synaptophysin-like 1	1	TITATFGYPFR	TITATFGYPFR	2	TITATFGYPFR2	327458	306839	322647
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	TITGFQTHTTPVLLAHGER	TITGFQTHTTPVLLAHGER	3	TITGFQTHTTPVLLAHGER3	73528.2	70115.6	51498.7
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	TITGFQTHTTPVLLAHGER	TITGFQTHTTPVLLAHGER	4	TITGFQTHTTPVLLAHGER4	155422	149977	151287
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	TITINCVK	TITINC(UniMod:4)VK	2	TITINC(UniMod:4)VK2	19317.1	30888.8	36568.7
M0RAK0	M0RAK0	M0RAK0_RAT	Proser2	Proline and serine rich 2	1	TITIRPDPSVAGK	TITIRPDPSVAGK	3	TITIRPDPSVAGK3	114931	125906	166171
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	TITKTVLGNDGHR	TITKTVLGNDGHR	3	TITKTVLGNDGHR3	16865.3	12584.9	9486.07
P62986	A0A8I6AN99;P62986;P0CG51;Q63429;A0A8I5ZTA8;P62982;A0A8I6A5Y3	RL40_RAT	Uba52	Ubiquitin-ribosomal protein eL40 fusion protein	0	TITLEVEPSDTIENVK	TITLEVEPSDTIENVK	2	TITLEVEPSDTIENVK2	801835	734784	725620
P62986	A0A8I6AN99;P62986;P0CG51;Q63429;A0A8I5ZTA8;P62982;A0A8I6A5Y3	RL40_RAT	Uba52	Ubiquitin-ribosomal protein eL40 fusion protein	0	TITLEVEPSDTIENVK	TITLEVEPSDTIENVK	3	TITLEVEPSDTIENVK3	109951	114529	102068
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	TITLQPGSPCNDFR	TITLQPGSPC(UniMod:4)NDFR	2	TITLQPGSPC(UniMod:4)NDFR2	330360	315432	327112
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	TITLQPGSPCNDFR	TITLQPGSPC(UniMod:4)NDFR	3	TITLQPGSPC(UniMod:4)NDFR3	7326.21	14417.9	8215.87
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	TITMETSDDLLFSK	TITMETSDDLLFSK	2	TITMETSDDLLFSK2	6164.28	6775.4	5669.87
O70377	O70377	SNP23_RAT	Snap23	Synaptosomal-associated protein 23	1	TITMLDEQGEQLNR	TITMLDEQGEQLNR	2	TITMLDEQGEQLNR2	145497	142129	142062
O70377	O70377	SNP23_RAT	Snap23	Synaptosomal-associated protein 23	1	TITMLDEQGEQLNR	TITMLDEQGEQLNR	3	TITMLDEQGEQLNR3	39894.4	35535.7	45702.8
O70377	O70377	SNP23_RAT	Snap23	Synaptosomal-associated protein 23	1	TITMLDEQGEQLNRIEEGMDQINK	TITMLDEQGEQLNRIEEGMDQINK	3	TITMLDEQGEQLNRIEEGMDQINK3	52997.6	49962	98670.8
Q53B90	Q53B90;Q5M7U5	RAB43_RAT	Rab43	Ras-related protein Rab-43	0	TITQSYYR	TITQSYYR	2	TITQSYYR2	11495	11748.5	20523.8
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	TITSEDVAEMHNILK	TITSEDVAEMHNILK	2	TITSEDVAEMHNILK2	10039.7	10904.9	9880.97
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	TITSEDVAEMHNILK	TITSEDVAEMHNILK	3	TITSEDVAEMHNILK3	288687	275643	271902
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	TITSEDVAEMHNILKK	TITSEDVAEMHNILKK	3	TITSEDVAEMHNILKK3	14225.4	13018.1	22904.9
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	TITSEDVAEMHNILKK	TITSEDVAEMHNILKK	4	TITSEDVAEMHNILKK4	60225.1	61218.9	76002.4
A0A8I6AT07	A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	1	TITSSAVCVSPDHDIYLAAQPR	TITSSAVC(UniMod:4)VSPDHDIYLAAQPR	3	TITSSAVC(UniMod:4)VSPDHDIYLAAQPR3	24918.6	21789.5	20965.3
Q6NYB7	A0A8I6A3I5;A0A8I6A1H5;Q6NYB7;A0A8I6ATH8	RAB1A_RAT	Rab1A	Ras-related protein Rab-1A	0	TITSSYYR	TITSSYYR	2	TITSSYYR2	1.89189e+06	2.00243e+06	2.11182e+06
Q5U316	Q5U316	RAB35_RAT	Rab35	Ras-related protein Rab-35	1	TITSTYYR	TITSTYYR	2	TITSTYYR2	148266	127433	141422
P35280	P62824;Q63941;P70550;P63012;Q63942;P35280;P35286	RAB8A_RAT	Rab8a	Ras-related protein Rab-8A	0	TITTAYYR	TITTAYYR	2	TITTAYYR2	1.09927e+06	1.158e+06	1.25798e+06
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	TITVNDK	TITVNDK	1	TITVNDK1	6972.52	10347	3363.1
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	TITVNDK	TITVNDK	2	TITVNDK2	145627	163759	146048
P21775	P07871;P21775	THIKA_RAT	Acaa1a	3-ketoacyl-CoA thiolase A, peroxisomal	0	TITVSQDEGVRPSTTMEGLAK	TITVSQDEGVRPSTTMEGLAK	3	TITVSQDEGVRPSTTMEGLAK3	107941	83346.4	114653
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	TITVTPSR	TITVTPSR	2	TITVTPSR2	900911	947050	1.01686e+06
D3ZUV3	D3ZUV3	D3ZUV3_RAT	Eif2a	Eukaryotic translation initiation factor 2A	1	TITYQAVPSEVPSEEPK	TITYQAVPSEVPSEEPK	2	TITYQAVPSEVPSEEPK2	7368.7	3020.43	9790.78
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	TIVEEQLVLK	TIVEEQLVLK	2	TIVEEQLVLK2	16728.7	15281.4	17464
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	TIVEEQLVLKR	TIVEEQLVLKR	3	TIVEEQLVLKR3	7179.54	13717	11595
Q6IFU8	Q6IFU7;Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	0	TIVEEVQDGK	TIVEEVQDGK	2	TIVEEVQDGK2	10713.6	9985.91	19514.5
Q498R7	Q498R7	CZIB_RAT	Czib	CXXC motif containing zinc binding protein	1	TIVEFECR	TIVEFEC(UniMod:4)R	2	TIVEFEC(UniMod:4)R2	11790.8	7088.65	8347.06
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	TIVEGYANVK	TIVEGYANVK	2	TIVEGYANVK2	33315.4	20924.1	29587.4
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	TIVEMENSGLVHMLK	TIVEMENSGLVHMLK	3	TIVEMENSGLVHMLK3	17233.6	14273.5	17589.1
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	TIVHESER	TIVHESER	2	TIVHESER2			18187.8
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	TIVHESERLEALK	TIVHESERLEALK	3	TIVHESERLEALK3	18280	23805.5	35640.2
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	TIVHESERLEALK	TIVHESERLEALK	4	TIVHESERLEALK4	13309	17999.7	13148.5
P63036	P63036	DNJA1_RAT	Dnaja1	DnaJ homolog subfamily A member 1	1	TIVITSHPGQIVK	TIVITSHPGQIVK	2	TIVITSHPGQIVK2	7259.5	6528.37	3993.54
P63036	P63036	DNJA1_RAT	Dnaja1	DnaJ homolog subfamily A member 1	1	TIVITSHPGQIVK	TIVITSHPGQIVK	3	TIVITSHPGQIVK3	141214	148442	148044
Q9EQS0	Q9EQS0	TALDO_RAT	Taldo1	Transaldolase	1	TIVMGASFR	TIVMGASFR	2	TIVMGASFR2	17471.3	14072.1	12138.4
D4ADT7	D4ADT7	D4ADT7_RAT	Nod1	Nucleotide-binding oligomerization domain containing 1	1	TIVNTDPVSR	TIVNTDPVSR	2	TIVNTDPVSR2	25465.2	31331.4	21341.4
P35738	P35738	ODBB_RAT	Bckdhb	2-oxoisovalerate dehydrogenase subunit beta, mitochondrial	1	TIVPWDVDTVCK	TIVPWDVDTVC(UniMod:4)K	2	TIVPWDVDTVC(UniMod:4)K2	6814.16	14793.5	
P0C2X9	P0C2X9	AL4A1_RAT	Aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1	TIVQEATR	TIVQEATR	2	TIVQEATR2	272518	274429	292892
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	TIVQLKPR	TIVQLKPR	2	TIVQLKPR2	11470.9	11424.3	8210.56
A0A0G2K1D2	A0A0G2K1D2	A0A0G2K1D2_RAT	Rap1gds1	Rap1 GTPase-GDP dissociation stimulator 1	1	TIVQSGGIK	TIVQSGGIK	2	TIVQSGGIK2	25162.1	17038.2	20717.6
Q64303	Q64303	PAK2_RAT	Pak2	Serine/threonine-protein kinase PAK 2	1	TIVSIGDPK	TIVSIGDPK	2	TIVSIGDPK2	63955		51702.4
A0A8I6B265	A0A8I6B265	A0A8I6B265_RAT	ENSRNOG00000064806	Ig-like domain-containing protein	1	TIVSVIYK	TIVSVIYK	2	TIVSVIYK2	79500.6	79811.6	58485.5
P53812	P53812	PIPNB_RAT	Pitpnb	Phosphatidylinositol transfer protein beta isoform	1	TIVTNEYMK	TIVTNEYMK	2	TIVTNEYMK2	25390.8	24706	29625
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	TIVTTLQDSIR	TIVTTLQDSIR	2	TIVTTLQDSIR2	2.98843e+07	2.58322e+07	2.73879e+07
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	TIVTTLQDSIR	TIVTTLQDSIR	3	TIVTTLQDSIR3	168165	142611	157725
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	TIVTTLQDSIRK	TIVTTLQDSIRK	2	TIVTTLQDSIRK2	114366	171908	154825
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	TIVTTLQDSIRK	TIVTTLQDSIRK	3	TIVTTLQDSIRK3	5.1826e+06	8.04351e+06	140841
Q3MHS7	Q3MHS7	Q3MHS7_RAT	Gmds	GDP-mannose 4,6-dehydratase	1	TIVWEGK	TIVWEGK	2	TIVWEGK2	34077.7	26901.1	31439.8
P13803	P13803	ETFA_RAT	Etfa	Electron transfer flavoprotein subunit alpha, mitochondrial	1	TIYAGNALCTVK	TIYAGNALC(UniMod:4)TVK	2	TIYAGNALC(UniMod:4)TVK2	122276	133838	99868.7
Q5M7T1	Q5M7T1	CIAO1_RAT	Ciao1	Probable cytosolic iron-sulfur protein assembly protein CIAO1	1	TIYDVAWCQLTGALATACGDDAIR	TIYDVAWC(UniMod:4)QLTGALATAC(UniMod:4)GDDAIR	3	TIYDVAWC(UniMod:4)QLTGALATAC(UniMod:4)GDDAIR3	19286.9	20528.3	22714.6
F7EUH5	F7EUH5	F7EUH5_RAT	Plxdc2	Plexin domain containing 2	1	TIYEYHR	TIYEYHR	2	TIYEYHR2	372283	334422	323864
F7F1X7	F7F1X7	F7F1X7_RAT	Pmm2	Phosphomannomutase	1	TIYFFGDK	TIYFFGDK	2	TIYFFGDK2	18572	18714.8	15516.3
F1MAA4	F1MAA4	F1MAA4_RAT	Atp13a2	ATPase cation transporting 13A2	1	TIYGPNVIGIPVK	TIYGPNVIGIPVK	2	TIYGPNVIGIPVK2	2636.36		4205.72
A0A8I6A6I4	A0A8I6A6I4	A0A8I6A6I4_RAT	Atp11b	Phospholipid-transporting ATPase	1	TIYIANR	TIYIANR	2	TIYIANR2	10495.7	23576.3	28410.4
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	TIYLVSFFEGLQR	TIYLVSFFEGLQR	2	TIYLVSFFEGLQR2	14614.4	12818.5	6493.45
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	TIYPLADLLAR	TIYPLADLLAR	2	TIYPLADLLAR2	49681.5	33609.1	46780.5
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	TIYPLADLLARPLPEGVDPLK	TIYPLADLLARPLPEGVDPLK	3	TIYPLADLLARPLPEGVDPLK3	18573.7	12448.6	19135.5
Q5M7T7	Q5M7T7	Q5M7T7_RAT	Pla2g7	Phospholipase A2 group VII	1	TIYSAIGAALASYGFIVATVEHR	TIYSAIGAALASYGFIVATVEHR	3	TIYSAIGAALASYGFIVATVEHR3		7774.59	2457.21
P01026	P01026	CO3_RAT	C3	Complement C3	1	TIYTPGSTVFYR	TIYTPGSTVFYR	2	TIYTPGSTVFYR2	1.68234e+06	1.56252e+06	1.5975e+06
P01026	P01026	CO3_RAT	C3	Complement C3	1	TIYTPGSTVFYR	TIYTPGSTVFYR	3	TIYTPGSTVFYR3	8288.51	9908.16	6792.28
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	TIYVGHK	TIYVGHK	2	TIYVGHK2	22328	21544.6	26843.7
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	TIYVGHKEPPPGAEAYIPQR	TIYVGHKEPPPGAEAYIPQR	4	TIYVGHKEPPPGAEAYIPQR4	36018.2	35483.9	37190.4
P98166	P98166	VLDLR_RAT	Vldlr	Very low-density lipoprotein receptor	1	TIYWTDAASK	TIYWTDAASK	2	TIYWTDAASK2	19129.8	24212.7	15526.2
D4ABP3	D4ABP3	D4ABP3_RAT	Cdr2l	Cerebellar degeneration-related protein 2-like	1	TKADINATK	TKADINATK	1	TKADINATK1	137798	134805	
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	TKDIVNGLR	TKDIVNGLR	2	TKDIVNGLR2	11300.8	12464.4	6471.23
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	TKDLQAICGLSCDELSSMVLELR	TKDLQAIC(UniMod:4)GLSC(UniMod:4)DELSSMVLELR	3	TKDLQAIC(UniMod:4)GLSC(UniMod:4)DELSSMVLELR3	8341.13	18917.3	4878.77
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	TKDNDHFNAMTSLSSK	TKDNDHFNAMTSLSSK	3	TKDNDHFNAMTSLSSK3	11927.1	18962.4	7410.36
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	TKDNDHFNAMTSLSSK	TKDNDHFNAMTSLSSK	4	TKDNDHFNAMTSLSSK4	12055	9837.45	17742.1
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	TKDSGSVSLQETR	TKDSGSVSLQETR	3	TKDSGSVSLQETR3	1991.16	4476.26	3054.2
P20760	P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	1	TKDVLTITLTPK	TKDVLTITLTPK	2	TKDVLTITLTPK2	130629	110818	125807
P20760	P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	1	TKDVLTITLTPK	TKDVLTITLTPK	3	TKDVLTITLTPK3	60612	41258.7	32346.2
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	TKEAGTQPQLQIR	TKEAGTQPQLQIR	3	TKEAGTQPQLQIR3	24883	53215.6	44216.9
O70352	O70352	CD82_RAT	Cd82	CD82 antigen	1	TKEEDNQLIVK	TKEEDNQLIVK	2	TKEEDNQLIVK2	3714.22		4266.61
O70352	O70352	CD82_RAT	Cd82	CD82 antigen	1	TKEEDNQLIVK	TKEEDNQLIVK	3	TKEEDNQLIVK3	11785.6	7990.09	18005.1
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	TKEIEAK	TKEIEAK	1	TKEIEAK1			1952.12
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	TKENVNATENCISAVGK	TKENVNATENC(UniMod:4)ISAVGK	2	TKENVNATENC(UniMod:4)ISAVGK2	2241.32	3993.51	2628.6
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	TKENVNATENCISAVGK	TKENVNATENC(UniMod:4)ISAVGK	3	TKENVNATENC(UniMod:4)ISAVGK3	20878.2	21811.8	27034.1
P24268	P24268	CATD_RAT	Ctsd	Cathepsin D	1	TKEPVSELLK	TKEPVSELLK	2	TKEPVSELLK2	20607.3		3596.5
P24268	P24268	CATD_RAT	Ctsd	Cathepsin D	1	TKEPVSELLK	TKEPVSELLK	3	TKEPVSELLK3	16680.1	27246.9	37795.6
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	TKESGEYAISIK	TKESGEYAISIK	3	TKESGEYAISIK3	6410.85	6090.02	7924
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	TKEVIFSMEEGSVK	TKEVIFSMEEGSVK	3	TKEVIFSMEEGSVK3	7726.59	14943.8	10488.4
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TKEVIQEWSLTNIK	TKEVIQEWSLTNIK	2	TKEVIQEWSLTNIK2	48262.5	51608.4	51432
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TKEVIQEWSLTNIK	TKEVIQEWSLTNIK	3	TKEVIQEWSLTNIK3	569369	577940	634844
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TKEVIQEWSLTNIKR	TKEVIQEWSLTNIKR	3	TKEVIQEWSLTNIKR3	10963.1	18062.7	10267.5
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TKEVIQEWSLTNIKR	TKEVIQEWSLTNIKR	4	TKEVIQEWSLTNIKR4	34594.9	40855.6	37794.2
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	TKEVVCTHCPTGTAGK	TKEVVC(UniMod:4)THC(UniMod:4)PTGTAGK	2	TKEVVC(UniMod:4)THC(UniMod:4)PTGTAGK2		964.556	
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	TKEVVCTHCPTGTAGK	TKEVVC(UniMod:4)THC(UniMod:4)PTGTAGK	3	TKEVVC(UniMod:4)THC(UniMod:4)PTGTAGK3	51956.2	70040.5	40275.8
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	TKEVVCTHCPTGTAGK	TKEVVC(UniMod:4)THC(UniMod:4)PTGTAGK	4	TKEVVC(UniMod:4)THC(UniMod:4)PTGTAGK4	38487.8	15388	33130.1
P51583	P51583	PUR6_RAT	Paics	Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase	1	TKEVYELLDSPGR	TKEVYELLDSPGR	3	TKEVYELLDSPGR3	24202.5	40825.5	28266.4
Q06486	Q06486;Q9JJ76	KC1D_RAT	Csnk1d	Casein kinase I isoform delta	0	TKHPQLHIESK	TKHPQLHIESK	3	TKHPQLHIESK3			11487
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	TKMPNASPEELADMVAK	TKMPNASPEELADMVAK	2	TKMPNASPEELADMVAK2	54419.7	33995.7	37457.9
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	TKMPNASPEELADMVAK	TKMPNASPEELADMVAK	3	TKMPNASPEELADMVAK3	1.14146e+06	938728	958731
A0A8I6A2Y2	A0A8I6A2Y2	A0A8I6A2Y2_RAT	Srrm2	Serine/arginine repetitive matrix 2	1	TKPDSSLYPLVDSK	TKPDSSLYPLVDSK	3	TKPDSSLYPLVDSK3	9344.06	12210.2	10788.4
P10818	P10818	CX6A1_RAT	Cox6a1	Cytochrome c oxidase subunit 6A1, mitochondrial	1	TKPFPWGDGNHTLFHNPHMNPLPTGYEDE	TKPFPWGDGNHTLFHNPHMNPLPTGYEDE	4	TKPFPWGDGNHTLFHNPHMNPLPTGYEDE4	101735	112778	94822.8
P34058	A0A8I6GLF3;P82995;P34058;A0A8I5ZQP6	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	TKPIWTR	TKPIWTR	2	TKPIWTR2	2.77501e+06	2.94015e+06	2.80434e+06
P34058	A0A8I6GLF3;P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	TKPIWTRNPDDITQEEYGEFYK	TKPIWTRNPDDITQEEYGEFYK	4	TKPIWTRNPDDITQEEYGEFYK4	8513.86	12709	7879.15
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	TKPKPPEPEDLAIICFTSGTTGNPK	TKPKPPEPEDLAIIC(UniMod:4)FTSGTTGNPK	3	TKPKPPEPEDLAIIC(UniMod:4)FTSGTTGNPK3	5679.21	5401.08	3506.95
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	TKPKPPEPEDLAIICFTSGTTGNPK	TKPKPPEPEDLAIIC(UniMod:4)FTSGTTGNPK	4	TKPKPPEPEDLAIIC(UniMod:4)FTSGTTGNPK4	31254.6	25243.8	35960.2
F1LZ11	F1LZ11	F1LZ11_RAT	AABR07065814.2	Ig-like domain-containing protein	1	TKPNNYATYYADSVK	TKPNNYATYYADSVK	2	TKPNNYATYYADSVK2	10757	23322.1	13617.1
F1LZ11	F1LZ11	F1LZ11_RAT	AABR07065814.2	Ig-like domain-containing protein	1	TKPNNYATYYADSVK	TKPNNYATYYADSVK	3	TKPNNYATYYADSVK3	112117	150536	50004.9
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	TKPPLEPGTVLYEAELSQFAEDIR	TKPPLEPGTVLYEAELSQFAEDIR	3	TKPPLEPGTVLYEAELSQFAEDIR3	24234	25065.3	16430.8
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	TKPPLEPGTVLYEAELSQFAEDIRK	TKPPLEPGTVLYEAELSQFAEDIRK	3	TKPPLEPGTVLYEAELSQFAEDIRK3		5577.38	2420.52
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	TKPPLEPGTVLYEAELSQFAEDIRK	TKPPLEPGTVLYEAELSQFAEDIRK	4	TKPPLEPGTVLYEAELSQFAEDIRK4	26656.8	22104.9	14031
Q5U2N0	Q5U2N0;F7F0L0	PYRG2_RAT	Ctps2	CTP synthase 2	0	TKPTQNSVR	TKPTQNSVR	2	TKPTQNSVR2			56549.1
D3ZQ80	D3ZQ80	D3ZQ80_RAT	Smg8	Nonsense-mediated mRNA decay factor SMG8	1	TKPVSVGEAGGAGDPGAAAGDSLR	TKPVSVGEAGGAGDPGAAAGDSLR	3	TKPVSVGEAGGAGDPGAAAGDSLR3	13627.5	13873.4	15182.6
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TKPVTGNLRPEEALQALTIYEGK	TKPVTGNLRPEEALQALTIYEGK	3	TKPVTGNLRPEEALQALTIYEGK3	134105	143532	127828
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TKPVTGNLRPEEALQALTIYEGK	TKPVTGNLRPEEALQALTIYEGK	4	TKPVTGNLRPEEALQALTIYEGK4	250925	307251	298514
O08730	O08730	GLYG_RAT	Gyg1	Glycogenin-1	1	TKPWNYTYNPQTK	TKPWNYTYNPQTK	2	TKPWNYTYNPQTK2	24898.4	21186.3	15649.6
O08730	O08730	GLYG_RAT	Gyg1	Glycogenin-1	1	TKPWNYTYNPQTK	TKPWNYTYNPQTK	3	TKPWNYTYNPQTK3	57257.2	51360.8	54057.6
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	TKPYIQVDIGGGQTK	TKPYIQVDIGGGQTK	2	TKPYIQVDIGGGQTK2	149844	138630	143716
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	TKPYIQVDIGGGQTK	TKPYIQVDIGGGQTK	3	TKPYIQVDIGGGQTK3	112531	96727.9	76730.4
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TKTETITGFQVDAIPANGQTPVQR	TKTETITGFQVDAIPANGQTPVQR	3	TKTETITGFQVDAIPANGQTPVQR3	36796.5	64459.3	64627.3
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	TKYPGTYLTFELVSFVPYDR	TKYPGTYLTFELVSFVPYDR	3	TKYPGTYLTFELVSFVPYDR3	41592.4	59540	37506.6
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	TKYPSGDK	TKYPSGDK	1	TKYPSGDK1			1882.25
A0A0G2JUU7	A0A0G2JUU7	A0A0G2JUU7_RAT	Tubgcp3	Gamma-tubulin complex component	1	TLAALVDHCQGR	TLAALVDHC(UniMod:4)QGR	3	TLAALVDHC(UniMod:4)QGR3	20769.4	21816.3	23583.7
Q02253	Q02253	MMSA_RAT	Aldh6a1	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial	1	TLADAEGDVFR	TLADAEGDVFR	2	TLADAEGDVFR2	106599	102569	121750
Q5RJK6	Q5RJK6	Q5RJK6_RAT	Inpp1	Inositol polyphosphate-1-phosphatase	1	TLADVLVQEVIK	TLADVLVQEVIK	2	TLADVLVQEVIK2	13188.2	18723.2	6980.46
P09760	P09760	FER_RAT	Fer	Tyrosine-protein kinase Fer	1	TLAEELTQTQQMLLHK	TLAEELTQTQQMLLHK	3	TLAEELTQTQQMLLHK3			10124.5
Q80W57	Q80W57	ABCG2_RAT	Abcg2	Broad substrate specificity ATP-binding cassette transporter ABCG2	1	TLAEGDVLSFHHITYR	TLAEGDVLSFHHITYR	4	TLAEGDVLSFHHITYR4	14177.9	19211.2	24928.9
A0A8I6GL10	A0A8I6GL10	A0A8I6GL10_RAT	Uchl5	Ubiquitin carboxyl-terminal hydrolase	1	TLAEHQQLIPLVEK	TLAEHQQLIPLVEK	3	TLAEHQQLIPLVEK3	18681.4	21221.6	19418.8
Q62871	Q62871	DC1I2_RAT	Dync1i2	Cytoplasmic dynein 1 intermediate chain 2	1	TLAEINASR	TLAEINASR	2	TLAEINASR2	382720	392833	415816
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	TLAELYTYDK	TLAELYTYDK	2	TLAELYTYDK2	13566.7		
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	TLAEQLEVGIATHIQK	TLAEQLEVGIATHIQK	2	TLAEQLEVGIATHIQK2	3354.89	2672.5	2805.46
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	TLAEQLEVGIATHIQK	TLAEQLEVGIATHIQK	3	TLAEQLEVGIATHIQK3	112331	69192.5	108181
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TLAESALQLLYTAK	TLAESALQLLYTAK	2	TLAESALQLLYTAK2	843330	841276	818944
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TLAESALQLLYTAK	TLAESALQLLYTAK	3	TLAESALQLLYTAK3	181597	136968	195124
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	TLAFREEIAPINLK	TLAFREEIAPINLK	3	TLAFREEIAPINLK3	87817.7	76616.9	83119.4
B2RZ78	B2RZ78	VPS29_RAT	Vps29	Vacuolar protein sorting-associated protein 29	1	TLAGDVHIVR	TLAGDVHIVR	2	TLAGDVHIVR2	16458.9	7567.54	14223
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	TLAGLHVR	TLAGLHVR	2	TLAGLHVR2	6758.74	16065.6	3995.67
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	TLAGLPLLVAYK	TLAGLPLLVAYK	2	TLAGLPLLVAYK2	83271.7	82510.5	78666.2
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	TLAGLPLLVAYKDDEIPVLK	TLAGLPLLVAYKDDEIPVLK	3	TLAGLPLLVAYKDDEIPVLK3	73480.6	80944.6	90192
B2RZ27	B2RZ27	SH3L3_RAT	Sh3bgrl3	SH3 domain-binding glutamic acid-rich-like protein 3	1	TLAGNPK	TLAGNPK	1	TLAGNPK1			5498.66
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	TLAHPISQEYLK	TLAHPISQEYLK	2	TLAHPISQEYLK2	4019.54		
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	TLAHPISQEYLK	TLAHPISQEYLK	3	TLAHPISQEYLK3	45052.1	46619	40219.6
Q62784	Q62784	INP4A_RAT	Inpp4a	Inositol polyphosphate-4-phosphatase type I A	1	TLAILADK	TLAILADK	2	TLAILADK2	13091.5	14228.7	15999.6
D4A565	D4A565	D4A565_RAT	Ndufb5	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial	1	TLAILQIESEK	TLAILQIESEK	2	TLAILQIESEK2	144680	125438	116310
Q6YDN8	Q6YDN8	Q6YDN8_RAT	Gid8	GID complex subunit 8 homolog	1	TLALLAFDSPEESPFGDLLHMMQR	TLALLAFDSPEESPFGDLLHMMQR	3	TLALLAFDSPEESPFGDLLHMMQR3	11050.7		
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	TLALLDREEQAVYHLLVK	TLALLDREEQAVYHLLVK	3	TLALLDREEQAVYHLLVK3	30332.4	28014.1	24444.2
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	TLALLDREEQAVYHLLVK	TLALLDREEQAVYHLLVK	4	TLALLDREEQAVYHLLVK4	28844.7	16705.3	7834.29
A0A1W2Q642	A0A1W2Q642	A0A1W2Q642_RAT	Pi16	Peptidase inhibitor 16	1	TLALQSSR	TLALQSSR	2	TLALQSSR2	477666	479566	562531
B5DEZ6	B5DEZ6	B5DEZ6_RAT	Gnpda2	Glucosamine-6-phosphate isomerase	1	TLAMDTILANAK	TLAMDTILANAK	2	TLAMDTILANAK2	10292.6	8145.78	6918.72
A0A8I6AB87	A0A8I6AB87	A0A8I6AB87_RAT	Gnpda1	Glucosamine-6-phosphate isomerase	1	TLAMDTILANAR	TLAMDTILANAR	2	TLAMDTILANAR2	6365.37	3847.23	
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	TLANLNPESSLFIIASK	TLANLNPESSLFIIASK	2	TLANLNPESSLFIIASK2	59592.5	59326.2	38403.3
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	TLANLNPESSLFIIASK	TLANLNPESSLFIIASK	3	TLANLNPESSLFIIASK3	11622.7	9009.71	6455.36
A0A8I6AMS6	A0A8I6AMS6	A0A8I6AMS6_RAT	Rangap1	RAN GTPase activating protein 1	1	TLAPLLLAFVTKPNGALESCSFAR	TLAPLLLAFVTKPNGALESC(UniMod:4)SFAR	3	TLAPLLLAFVTKPNGALESC(UniMod:4)SFAR3	3596.96	6298.93	4784.79
A0A0G2JSI4	A0A0G2JSI4	A0A0G2JSI4_RAT	Adgre5	Adhesion G protein-coupled receptor E5	1	TLAQFLPK	TLAQFLPK	2	TLAQFLPK2	371266	318345	317619
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	TLAQIGDSMLLTCSTTGCESPSFSWR	TLAQIGDSMLLTC(UniMod:4)STTGC(UniMod:4)ESPSFSWR	3	TLAQIGDSMLLTC(UniMod:4)STTGC(UniMod:4)ESPSFSWR3	77942.4	93833.9	81411
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	TLASAGGPDNLVLLDPGK	TLASAGGPDNLVLLDPGK	2	TLASAGGPDNLVLLDPGK2	143335	150065	141038
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	TLASAGGPDNLVLLDPGK	TLASAGGPDNLVLLDPGK	3	TLASAGGPDNLVLLDPGK3	11928.8	4645.32	8340.35
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	TLASAGGPDNLVLLDPGKYK	TLASAGGPDNLVLLDPGKYK	3	TLASAGGPDNLVLLDPGKYK3	17287.2	15389.5	10034.9
P51146	P51146	RAB4B_RAT	Rab4b	Ras-related protein Rab-4B	1	TLASPNIVVILCGNKK	TLASPNIVVILC(UniMod:4)GNKK	3	TLASPNIVVILC(UniMod:4)GNKK3	12538.5	11906.1	10152.9
A0A8I5ZVT2	A0A8I5ZVT2	A0A8I5ZVT2_RAT	Fndc3a	Fibronectin type III domain containing 3a	1	TLATDAVQYHLQMEDK	TLATDAVQYHLQMEDK	3	TLATDAVQYHLQMEDK3	3779.07	3192	11433.7
P51794	P51794	CLCN4_RAT	Clcn4	H(+)/Cl(-) exchange transporter 4	1	TLATDVMRPR	TLATDVMRPR	3	TLATDVMRPR3	167065	201415	134072
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	TLATSSSYMWKPPSR	TLATSSSYMWKPPSR	3	TLATSSSYMWKPPSR3	164672	171027	205387
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	TLATWATK	TLATWATK	2	TLATWATK2	540317	544748	526023
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	TLAVGLINMAEVMQHPNEGALVLGLHSNVK	TLAVGLINMAEVMQHPNEGALVLGLHSNVK	4	TLAVGLINMAEVMQHPNEGALVLGLHSNVK4	77073.1	101975	69998.6
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	TLAVITAIGNPINEPLFYR	TLAVITAIGNPINEPLFYR	3	TLAVITAIGNPINEPLFYR3	30363.7	26062.6	36089.2
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	TLAVLLDNILQR	TLAVLLDNILQR	2	TLAVLLDNILQR2	37120.9	41426.3	38783.5
Q6P503	Q6P503	Q6P503_RAT	Atp6v1d	V-type proton ATPase subunit D	1	TLAYIITELDER	TLAYIITELDER	2	TLAYIITELDER2	8002.2		13084.9
E9PT29	E9PT29	E9PT29_RAT	Ddx17	DEAD box helicase 17	1	TLAYLLPAIVHINHQPYLER	TLAYLLPAIVHINHQPYLER	4	TLAYLLPAIVHINHQPYLER4	19303.3		5920.81
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	TLCADLSPR	TLC(UniMod:4)ADLSPR	2	TLC(UniMod:4)ADLSPR2	42190.5	57123.8	50502.7
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	TLCCATIGR	TLC(UniMod:4)C(UniMod:4)ATIGR	2	TLC(UniMod:4)C(UniMod:4)ATIGR2	5328.76	5818.8	6060.52
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	TLCCATVGR	TLC(UniMod:4)C(UniMod:4)ATVGR	2	TLC(UniMod:4)C(UniMod:4)ATVGR2	61818.8	59035.4	121664
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	TLCDYSK	TLC(UniMod:4)DYSK	2	TLC(UniMod:4)DYSK2	51939	63123.4	48806.5
Q3KRD0	Q3KRD0	SYDM_RAT	Dars2	Aspartate--tRNA ligase, mitochondrial	1	TLCEAPVESVVR	TLC(UniMod:4)EAPVESVVR	2	TLC(UniMod:4)EAPVESVVR2		2719.06	360.283
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	TLCEEEDEGHIQPQQAAAR	TLC(UniMod:4)EEEDEGHIQPQQAAAR	3	TLC(UniMod:4)EEEDEGHIQPQQAAAR3	37261	54930.7	59710.1
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	TLCGLDESK	TLC(UniMod:4)GLDESK	2	TLC(UniMod:4)GLDESK2	58004.6	60208.5	74520
A0A8I6A6I4	A0A8I6A6I4	A0A8I6A6I4_RAT	Atp11b	Phospholipid-transporting ATPase	1	TLCIAYR	TLC(UniMod:4)IAYR	2	TLC(UniMod:4)IAYR2	6686.73	6153.21	6083.11
F1M0B5	F1M0B5	F1M0B5_RAT	Cd84	CD84 molecule	1	TLCNEIVV	TLC(UniMod:4)NEIVV	1	TLC(UniMod:4)NEIVV1	22667.3	21439.5	23809
P15384	P15384	KCNA3_RAT	Kcna3	Potassium voltage-gated channel subfamily A member 3	1	TLCQFPETLLGDPK	TLC(UniMod:4)QFPETLLGDPK	2	TLC(UniMod:4)QFPETLLGDPK2	112525	111267	98525
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	TLCSLQVNVIDINDQIPIFER	TLC(UniMod:4)SLQVNVIDINDQIPIFER	3	TLC(UniMod:4)SLQVNVIDINDQIPIFER3	39277.4	50444.5	59534.2
A0A8I5ZV31	A0A8I5ZV31	A0A8I5ZV31_RAT	Atp11c	Phospholipid-transporting ATPase	1	TLCVAFK	TLC(UniMod:4)VAFK	2	TLC(UniMod:4)VAFK2		32809.2	30918.8
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	TLCVAYK	TLC(UniMod:4)VAYK	2	TLC(UniMod:4)VAYK2	93489.7	88983.1	77709
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	TLCYITGWGETK	TLC(UniMod:4)YITGWGETK	2	TLC(UniMod:4)YITGWGETK2	954209	829906	819775
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	TLCYITGWGETK	TLC(UniMod:4)YITGWGETK	3	TLC(UniMod:4)YITGWGETK3	7205.6	4261.81	1839.66
O88277	O88277	FAT2_RAT	Fat2	Protocadherin Fat 2	1	TLDADVSDQNR	TLDADVSDQNR	2	TLDADVSDQNR2	5002.88	8103.34	3567.79
Q6AXR4	Q6AXR4	HEXB_RAT	Hexb	Beta-hexosaminidase subunit beta	1	TLDAMAFNK	TLDAMAFNK	2	TLDAMAFNK2	17613.6	15894	14796.8
F1LM66	F1LM66	F1LM66_RAT	Eftud2	116 kDa U5 small nuclear ribonucleoprotein component	1	TLDELGIHLTK	TLDELGIHLTK	3	TLDELGIHLTK3		3540.58	3131.31
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	TLDFHFDISETPIIGNK	TLDFHFDISETPIIGNK	3	TLDFHFDISETPIIGNK3	27025.7	19407.3	26762
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	TLDFHFDISETPIIGR	TLDFHFDISETPIIGR	2	TLDFHFDISETPIIGR2		3854.06	
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	TLDFHFDISETPIIGR	TLDFHFDISETPIIGR	3	TLDFHFDISETPIIGR3	24464.9	37117.1	25834.1
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	TLDGELDEK	TLDGELDEK	2	TLDGELDEK2	35614	51375.4	37779.8
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	TLDGFKK	TLDGFKK	1	TLDGFKK1	772.07	1742.06	3900.06
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	TLDGFKK	TLDGFKK	2	TLDGFKK2	733669	803267	724251
A0A0G2K542	A0A0G2K542	A0A0G2K542_RAT	Ugp2	UTP--glucose-1-phosphate uridylyltransferase	1	TLDGGLNVIQLETAVGAAIK	TLDGGLNVIQLETAVGAAIK	3	TLDGGLNVIQLETAVGAAIK3	1959.85		4868.07
Q64542	Q64542	AT2B4_RAT	Atp2b4	Plasma membrane calcium-transporting ATPase 4	1	TLDKDPMLLSGTHVMEGSGR	TLDKDPMLLSGTHVMEGSGR	3	TLDKDPMLLSGTHVMEGSGR3	3721.34		
Q64542	Q64542	AT2B4_RAT	Atp2b4	Plasma membrane calcium-transporting ATPase 4	1	TLDKDPMLLSGTHVMEGSGR	TLDKDPMLLSGTHVMEGSGR	4	TLDKDPMLLSGTHVMEGSGR4	13872.6	16141	9892.19
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	TLDLDTASYK	TLDLDTASYK	2	TLDLDTASYK2	229464	246701	226088
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	TLDLPIYVTR	TLDLPIYVTR	2	TLDLPIYVTR2	640676	753530	749533
F1LT49	F1LT49	F1LT49_RAT	Lrrc47	Leucine rich repeat containing 47	1	TLDLSNNQLTEIPAELADCPK	TLDLSNNQLTEIPAELADC(UniMod:4)PK	3	TLDLSNNQLTEIPAELADC(UniMod:4)PK3	13637.4	16237	17770.1
Q5U2R9	Q5U2R9	Q5U2R9_RAT	Scfd2	Sec1 family domain containing 2	1	TLDLTGAVGHHGDNLVEK	TLDLTGAVGHHGDNLVEK	3	TLDLTGAVGHHGDNLVEK3	10825.5	13664.9	7406.32
Q5U2R9	Q5U2R9	Q5U2R9_RAT	Scfd2	Sec1 family domain containing 2	1	TLDLTGAVGHHGDNLVEK	TLDLTGAVGHHGDNLVEK	4	TLDLTGAVGHHGDNLVEK4	17063.8	7575.57	16892.3
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	TLDMENFNTEVNIPPGAK	TLDMENFNTEVNIPPGAK	3	TLDMENFNTEVNIPPGAK3	1.94074e+06	4.31108e+06	2.42242e+06
D4A254	D4A254	D4A254_RAT	Phlpp2	PH domain and leucine rich repeat protein phosphatase 2	1	TLDMFSHITTLK	TLDMFSHITTLK	3	TLDMFSHITTLK3	3479.22		2803.69
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	TLDMIKK	TLDMIKK	2	TLDMIKK2	330676	411539	326299
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	TLDNLGYR	TLDNLGYR	2	TLDNLGYR2	213458	287939	323315
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	TLDNNLATEAYER	TLDNNLATEAYER	2	TLDNNLATEAYER2	21429.2	35438.4	22904.8
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	TLDNVAIAEEEK	TLDNVAIAEEEK	2	TLDNVAIAEEEK2	343989	303956	310844
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	TLDPDPAIR	TLDPDPAIR	2	TLDPDPAIR2	43035.7	28645.8	22752
D3ZZJ7	D3ZZJ7	D3ZZJ7_RAT	Dcp1b	5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase	1	TLDPEPQHLPLTALFGK	TLDPEPQHLPLTALFGK	3	TLDPEPQHLPLTALFGK3	10401.5	10741.4	8451.78
Q6P7D4	Q6P7D4	CP20A_RAT	Cyp20a1	Cytochrome P450 20A1	1	TLDPFETMLK	TLDPFETMLK	2	TLDPFETMLK2	41100.1	47929.2	56955.9
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	TLDPLWK	TLDPLWK	2	TLDPLWK2	144519	157220	143725
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	TLDPNSAFLHTLDQQKPR	TLDPNSAFLHTLDQQKPR	3	TLDPNSAFLHTLDQQKPR3	12842.4	15391.4	9174.07
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	TLDPNSAFLHTLDQQKPR	TLDPNSAFLHTLDQQKPR	4	TLDPNSAFLHTLDQQKPR4	18623.7	18023.4	23345
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	TLDQSPELR	TLDQSPELR	2	TLDQSPELR2	42182.1	40438.9	34504.4
Q5U1Z9	Q5U1Z9	Q5U1Z9_RAT	Mtx2	Metaxin 2	1	TLDQVLEDVDR	TLDQVLEDVDR	2	TLDQVLEDVDR2	48249	25941.3	32437.2
D3ZJR7	D3ZJR7	D3ZJR7_RAT	Dsc2	Desmocollin 2	1	TLDREAETIR	TLDREAETIR	3	TLDREAETIR3	36492.2	47654.7	72135.1
P32198	P32198	CPT1A_RAT	Cpt1a	Carnitine O-palmitoyltransferase 1, liver isoform	1	TLDREELKPIR	TLDREELKPIR	3	TLDREELKPIR3	25272.1	27115.9	20804.6
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	TLDSALFYQDK	TLDSALFYQDK	2	TLDSALFYQDK2	8532.25	9368.21	14567.4
A2RRU1	A2RRU1	GYS1_RAT	Gys1	Glycogen [starch] synthase, muscle	1	TLDSMNSK	TLDSMNSK	2	TLDSMNSK2	22513.2	25692.2	30187.4
A0A0G2JWD0	A0A0G2JWD0	A0A0G2JWD0_RAT	Prom1	Prominin 1	1	TLDSVSSK	TLDSVSSK	2	TLDSVSSK2	52860.2	53482.1	56167.9
P09527	P09527	RAB7A_RAT	Rab7a	Ras-related protein Rab-7a	1	TLDSWRDEFLIQASPR	TLDSWRDEFLIQASPR	2	TLDSWRDEFLIQASPR2	7296.63	10768.6	10173
P09527	P09527	RAB7A_RAT	Rab7a	Ras-related protein Rab-7a	1	TLDSWRDEFLIQASPR	TLDSWRDEFLIQASPR	3	TLDSWRDEFLIQASPR3	498610	489521	551750
B0BNA9	B0BNA9	CNO11_RAT	Cnot11	CCR4-NOT transcription complex subunit 11	1	TLDTGETPSETK	TLDTGETPSETK	2	TLDTGETPSETK2	2266.57		2041.02
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	TLDTLLLPTANIR	TLDTLLLPTANIR	2	TLDTLLLPTANIR2	165022	236614	209275
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	TLDTLLLPTANIR	TLDTLLLPTANIR	3	TLDTLLLPTANIR3	42022.7	54140.5	45668
Q7M733	Q7M733	HPS6_RAT	Hps6	BLOC-2 complex member HPS6	1	TLDTSGEAGTK	TLDTSGEAGTK	2	TLDTSGEAGTK2		2506.91	
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	TLDTTLQFPYK	TLDTTLQFPYK	2	TLDTTLQFPYK2	7287.17	9114.66	10470.8
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	TLDTTLQFPYKEPEHASGQR	TLDTTLQFPYKEPEHASGQR	3	TLDTTLQFPYKEPEHASGQR3	40222	35689.1	36894.8
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	TLDTTLQFPYKEPEHASGQR	TLDTTLQFPYKEPEHASGQR	4	TLDTTLQFPYKEPEHASGQR4	69726.5	84764	77702.6
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	TLDVFNITIAR	TLDVFNITIAR	2	TLDVFNITIAR2	63896.9	59089.1	69576.3
P31325	P31325	PHKG2_RAT	Phkg2	Phosphorylase b kinase gamma catalytic chain, liver/testis isoform	1	TLDVGPEDELPDWAAAK	TLDVGPEDELPDWAAAK	2	TLDVGPEDELPDWAAAK2	14653.2	8608.2	9834.69
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	TLDVPSSQQHR	TLDVPSSQQHR	2	TLDVPSSQQHR2	19794.1	22024.5	16381.8
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	TLDVPSSQQHR	TLDVPSSQQHR	3	TLDVPSSQQHR3	158846	225356	180827
Q63433	Q63433	PKN1_RAT	Pkn1	Serine/threonine-protein kinase N1	1	TLDWDALLAR	TLDWDALLAR	2	TLDWDALLAR2	35442	34772.2	30564.1
A0A0G2K516	A0A0G2K516	A0A0G2K516_RAT	Stx11	Syntaxin 11	1	TLDYTGEAK	TLDYTGEAK	2	TLDYTGEAK2	941163	950087	1.0402e+06
D3ZDR7	D3ZDR7	D3ZDR7_RAT	Themis2	Thymocyte selection associated family member 2	1	TLEAFPANK	TLEAFPANK	2	TLEAFPANK2	19541.1	20757.9	31676.6
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	TLEAHKDPHKEVVR	TLEAHKDPHKEVVR	3	TLEAHKDPHKEVVR3			4919.57
E9PU02	E9PU02	E9PU02_RAT	Trappc9	Trafficking protein particle complex subunit 9	1	TLEAILNFK	TLEAILNFK	2	TLEAILNFK2	10323.6	7848.79	9452.11
Q7TP54	P02793;A0A8I6GIG4;A0A8I5ZY31;M0RCS3;M0R597;M0R5T8;Q7TP54;M0R6L9;A0A8L2QVZ0	RIPR2_RAT	Ripor2	Rho family-interacting cell polarization regulator 2	0	TLEAMEAALALEK	TLEAMEAALALEK	2	TLEAMEAALALEK2	46758.6	47975.9	34384.5
Q7TP54	P02793;A0A8I6GIG4;A0A8I5ZY31;M0RCS3;M0R597;M0R5T8;Q7TP54;M0R6L9;A0A8L2QVZ0	RIPR2_RAT	Ripor2	Rho family-interacting cell polarization regulator 2	0	TLEAMEAALALEK	TLEAMEAALALEK	3	TLEAMEAALALEK3	3315.68		
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	TLEAQLTPQVVER	TLEAQLTPQVVER	2	TLEAQLTPQVVER2	2.31874e+07	2.26329e+07	2.13047e+07
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	TLEAQLTPQVVER	TLEAQLTPQVVER	3	TLEAQLTPQVVER3	8.8886e+06	9.17748e+06	8.96389e+06
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	TLEAQLTPQVVERWQK	TLEAQLTPQVVERWQK	3	TLEAQLTPQVVERWQK3	43651	42628.8	53732.3
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	TLEDEAK	TLEDEAK	1	TLEDEAK1		204260	
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	TLEDEAK	TLEDEAK	2	TLEDEAK2		22535.5	53678.4
F1M9D6	F1M9D6	F1M9D6_RAT	Stat1	Signal transducer and activator of transcription	1	TLEDLQDEYDFK	TLEDLQDEYDFK	2	TLEDLQDEYDFK2	8541.27	6620.79	
D3ZDR7	D3ZDR7	D3ZDR7_RAT	Themis2	Thymocyte selection associated family member 2	1	TLEDLVSAMPQNSTQCPIYFK	TLEDLVSAMPQNSTQC(UniMod:4)PIYFK	3	TLEDLVSAMPQNSTQC(UniMod:4)PIYFK3	4214.24		5165.87
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	TLEDPDLNVR	TLEDPDLNVR	2	TLEDPDLNVR2	420111	504489	439726
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	TLEDPDLNVRR	TLEDPDLNVRR	3	TLEDPDLNVRR3	251441	345487	308683
F7FFW7	F7FFW7	F7FFW7_RAT	Atp6v0d1	ATPase H+ transporting V0 subunit D1	1	TLEDRFFEHEVK	TLEDRFFEHEVK	4	TLEDRFFEHEVK4			4974.27
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	TLEEAIR	TLEEAIR	2	TLEEAIR2	75699.7		
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	TLEEAVGNIVK	TLEEAVGNIVK	2	TLEEAVGNIVK2	45197.8	41618.1	54067.8
A0A8I5ZTU5	A0A8I5ZTU5;A0A8I6ATA7	A0A8I5ZTU5_RAT	Ranbp1	RAN binding protein 1	0	TLEEDEEELFK	TLEEDEEELFK	2	TLEEDEEELFK2	90977.6	91911	87884.8
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	TLEEEFAR	TLEEEFAR	2	TLEEEFAR2	126536	151198	131817
Q5PPK9	Q5PPK9	EIPR1_RAT	Eipr1	EARP and GARP complex-interacting protein 1	1	TLEEHSHWVWSVR	TLEEHSHWVWSVR	4	TLEEHSHWVWSVR4	15042.4	15151.7	
Q6AYD4	Q6AYD4	ESAM_RAT	Esam	Endothelial cell-selective adhesion molecule	1	TLEELANDIK	TLEELANDIK	2	TLEELANDIK2	164858	138440	170824
Q6AYD4	Q6AYD4	ESAM_RAT	Esam	Endothelial cell-selective adhesion molecule	1	TLEELANDIKEDAIAPR	TLEELANDIKEDAIAPR	2	TLEELANDIKEDAIAPR2	1372.87	3853.58	4598.96
Q6AYD4	Q6AYD4	ESAM_RAT	Esam	Endothelial cell-selective adhesion molecule	1	TLEELANDIKEDAIAPR	TLEELANDIKEDAIAPR	3	TLEELANDIKEDAIAPR3	153019	113411	115169
Q4V8I7	Q4V8I7	LRC8A_RAT	Lrrc8a	Volume-regulated anion channel subunit LRRC8A	1	TLEELHLTGNLSAENNR	TLEELHLTGNLSAENNR	3	TLEELHLTGNLSAENNR3	4149.01	5661.49	4176.28
P70587	A0A8I6AE43;P70587	LRRC7_RAT	Lrrc7	Leucine-rich repeat-containing protein 7	0	TLEELYLDANQIEELPK	TLEELYLDANQIEELPK	3	TLEELYLDANQIEELPK3	110704	74201.6	146583
Q811U3	Q8K3M6;Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	0	TLEEMELR	TLEEMELR	2	TLEEMELR2	29138.3		29145.9
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	TLEESKETDIK	TLEESKETDIK	2	TLEESKETDIK2	4881.52	9816.21	3665.7
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	TLEESKETDIK	TLEESKETDIK	3	TLEESKETDIK3	11772.9	14910.1	13444.3
Q62773	Q62773;F1LXN6;A0A8I6AFM8	S28A2_RAT	Slc28a2	Sodium/nucleoside cotransporter 2	0	TLEEVTQGHSLK	TLEEVTQGHSLK	2	TLEEVTQGHSLK2	1305.74		2829.26
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	TLEFELEALNDK	TLEFELEALNDK	2	TLEFELEALNDK2	9417.57	9212.57	
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	TLEFELEALNDKK	TLEFELEALNDKK	3	TLEFELEALNDKK3	3726.08	3622.49	6089.73
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	TLEFFWR	TLEFFWR	2	TLEFFWR2	43993.9	48398.5	42704.7
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	TLEFKPYVIFIKPPSIER	TLEFKPYVIFIKPPSIER	4	TLEFKPYVIFIKPPSIER4	30822.8	32546.1	36261.7
Q9QWG5	Q9QWG5	INP4B_RAT	Inpp4b	Type II inositol 3,4-bisphosphate 4-phosphatase	1	TLEFVPINLHLQR	TLEFVPINLHLQR	3	TLEFVPINLHLQR3	18350.7	25242.6	25675
F1LTX4	F1LTX4	F1LTX4_RAT	Lrrn4	Leucine rich repeat neuronal 4	1	TLEGDIFK	TLEGDIFK	2	TLEGDIFK2	90128	103136	104601
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	TLEGELHDLR	TLEGELHDLR	2	TLEGELHDLR2	3182.28		
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	TLEGELHDLR	TLEGELHDLR	3	TLEGELHDLR3	33163.9	31352.5	24878.4
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	TLEGPENCLKPK	TLEGPENC(UniMod:4)LKPK	3	TLEGPENC(UniMod:4)LKPK3	34909.2	20044.3	40739.2
D3ZTA9	D3ZTA9;D3ZFR1	D3ZTA9_RAT	Hs3st3b1	Sulfotransferase	0	TLEGQITMEK	TLEGQITMEK	2	TLEGQITMEK2	11228.3	8881.64	8731.47
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	TLEHINAILLGAYR	TLEHINAILLGAYR	2	TLEHINAILLGAYR2	169245	130449	134948
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	TLEHINAILLGAYR	TLEHINAILLGAYR	3	TLEHINAILLGAYR3	3.05589e+06	2.45664e+06	2.87102e+06
D3ZYP9	D3ZYP9	D3ZYP9_RAT	Nlrc3	NLR family, CARD domain containing 3	1	TLEILDLR	TLEILDLR	2	TLEILDLR2	13817.5	15576.6	16329.1
D4ACK1	D4ACK1	D4ACK1_RAT	Nup214	Nucleoporin 214	1	TLELISAEGER	TLELISAEGER	2	TLELISAEGER2		3642.99	4916.54
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	TLELQGLINDLQR	TLELQGLINDLQR	2	TLELQGLINDLQR2	34429	23391.1	19896.6
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	TLELQGLINDLQR	TLELQGLINDLQR	3	TLELQGLINDLQR3	3941.05	6857.05	2559.57
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	TLENLLVSAK	TLENLLVSAK	2	TLENLLVSAK2	60536.1	64182.1	81769.3
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	TLENTVVAEAVASK	TLENTVVAEAVASK	2	TLENTVVAEAVASK2	63043.8	61295.5	60425.6
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	TLENTVVAEAVASK	TLENTVVAEAVASK	3	TLENTVVAEAVASK3	62111.7	93266.1	76882.3
D3ZTC4	D3ZTC4	D3ZTC4_RAT	Ccdc88b	Coiled-coil domain containing 88B	1	TLEPELELSK	TLEPELELSK	2	TLEPELELSK2		9874.9	
Q9QZM5	Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	1	TLEPVKPPTVPNDYMTSPAR	TLEPVKPPTVPNDYMTSPAR	3	TLEPVKPPTVPNDYMTSPAR3	93197.7	72144.6	93285.5
A0A8I5ZLD3	A0A8I5ZLD3	A0A8I5ZLD3_RAT	Abi2	Abl-interactor 2	1	TLEPVRPPVVPNDYVPSPTR	TLEPVRPPVVPNDYVPSPTR	3	TLEPVRPPVVPNDYVPSPTR3	64518.1	69864.2	88302.3
Q3KRE2	Q3KRE2	Q3KRE2_RAT	Mettl7a	Methyltransferase like 7A	1	TLEQASFSK	TLEQASFSK	2	TLEQASFSK2	61177.3	59938.1	44171.1
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	TLEQHDNIVTHYK	TLEQHDNIVTHYK	2	TLEQHDNIVTHYK2	7405.85	9430.3	2341.06
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	TLEQHDNIVTHYK	TLEQHDNIVTHYK	3	TLEQHDNIVTHYK3	253557	270196	226811
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	TLEQHDNIVTHYK	TLEQHDNIVTHYK	4	TLEQHDNIVTHYK4	194155	234062	228890
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	TLEQHENFVEVAR	TLEQHENFVEVAR	3	TLEQHENFVEVAR3	13682.6	8650.36	9949.49
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	TLEQTGHVSSK	TLEQTGHVSSK	2	TLEQTGHVSSK2	11141.1		25796.3
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	TLEQTGHVSSK	TLEQTGHVSSK	3	TLEQTGHVSSK3	14631.1		17666.1
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	TLEQVLR	TLEQVLR	2	TLEQVLR2	28628.2	22480.1	30900.1
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	TLESDCTK	TLESDC(UniMod:4)TK	2	TLESDC(UniMod:4)TK2	6924.39		13002.3
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	TLESLLAHLQEEHGLTVR	TLESLLAHLQEEHGLTVR	3	TLESLLAHLQEEHGLTVR3	22799.5	22979.6	26291.7
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	TLESLLAHLQEEHGLTVR	TLESLLAHLQEEHGLTVR	4	TLESLLAHLQEEHGLTVR4	17559.2	32697.4	15475.5
F7ETC0	F7ETC0	F7ETC0_RAT	Smpd1	Sphingomyelin phosphodiesterase	1	TLESLLK	TLESLLK	2	TLESLLK2	23982.8		31296.6
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	TLESQLATVR	TLESQLATVR	2	TLESQLATVR2	202750	168559	171679
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	TLESQNLFCCLYR	TLESQNLFC(UniMod:4)C(UniMod:4)LYR	2	TLESQNLFC(UniMod:4)C(UniMod:4)LYR2	9839.46	10845.2	6776.1
Q99PD4	Q99PD4	ARC1A_RAT	Arpc1a	Actin-related protein 2/3 complex subunit 1A	1	TLESSIQGLR	TLESSIQGLR	2	TLESSIQGLR2	31011.1	29729.2	53824.1
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	TLESVDPLGGLNTIDILTAIR	TLESVDPLGGLNTIDILTAIR	3	TLESVDPLGGLNTIDILTAIR3	1656.53	2539.45	
Q9Z136	Q9Z136	TSC1_RAT	Tsc1	Hamartin	1	TLETHDVVIECAK	TLETHDVVIEC(UniMod:4)AK	3	TLETHDVVIEC(UniMod:4)AK3	3731.81	10198.1	10275.6
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	TLETITNR	TLETITNR	2	TLETITNR2	80549.4	124292	116406
Q6AXW2	Q6AXW2	Q6AXW2_RAT	Tmod3	Tropomodulin 3	1	TLETNTHVK	TLETNTHVK	2	TLETNTHVK2	322506	317688	249037
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	TLETPAAQMEGFLNR	TLETPAAQMEGFLNR	2	TLETPAAQMEGFLNR2	450809	444489	440551
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	TLETPAAQMEGFLNR	TLETPAAQMEGFLNR	3	TLETPAAQMEGFLNR3	164411	181906	178851
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	TLETPAAQMEGFLNRK	TLETPAAQMEGFLNRK	3	TLETPAAQMEGFLNRK3	205856	269860	301010
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	TLETYQQLFYLLQTK	TLETYQQLFYLLQTK	2	TLETYQQLFYLLQTK2		5498.8	
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	TLETYQQLFYLLQTK	TLETYQQLFYLLQTK	3	TLETYQQLFYLLQTK3	3954.38	3491.88	
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	TLETYQQLFYLLQTKPSYLAK	TLETYQQLFYLLQTKPSYLAK	3	TLETYQQLFYLLQTKPSYLAK3	20165.8	26358.6	23179.4
Q6TUG0	Q6TUG0	DJB11_RAT	Dnajb11	DnaJ homolog subfamily B member 11	1	TLEVEIEPGVR	TLEVEIEPGVR	2	TLEVEIEPGVR2	171959	155541	136850
B2GV22	B2GV22	PTSS2_RAT	Ptdss2	Phosphatidylserine synthase 2	1	TLEWLSLK	TLEWLSLK	2	TLEWLSLK2	13507.7	16984.2	17020.1
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	TLFATEDSLEVR	TLFATEDSLEVR	2	TLFATEDSLEVR2	98103.6	101662	91971.4
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	TLFATEDSLEVRR	TLFATEDSLEVRR	3	TLFATEDSLEVRR3	14097.1	19694.5	27358.1
Q9QYM2	Q9QYM2	PARG_RAT	Parg	Poly(ADP-ribose) glycohydrolase	1	TLFCYFR	TLFC(UniMod:4)YFR	2	TLFC(UniMod:4)YFR2	4498.1	7314.92	8067.15
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	TLFDEVQFK	TLFDEVQFK	2	TLFDEVQFK2	8594.22	12743.4	11932.8
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	TLFDWYK	TLFDWYK	2	TLFDWYK2	63185.2	72643	70113.1
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	TLFDWYR	TLFDWYR	2	TLFDWYR2	95716.1	93506.2	97452.1
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	TLFEDSFQQIMSFSPQDLR	TLFEDSFQQIMSFSPQDLR	3	TLFEDSFQQIMSFSPQDLR3	7941.3	3556.64	9343.42
P51111	P51111	HD_RAT	Htt	Huntingtin	1	TLFGTNLASQFDGLSSNPSK	TLFGTNLASQFDGLSSNPSK	3	TLFGTNLASQFDGLSSNPSK3		17800.9	8356.11
P07867	P07867	LIPC_RAT	Lipc	Hepatic triacylglycerol lipase	1	TLFLITR	TLFLITR	2	TLFLITR2	215687	210875	206335
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	TLFPGTDHIDQLK	TLFPGTDHIDQLK	2	TLFPGTDHIDQLK2	54381.2	41184.1	43903
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	TLFPGTDHIDQLK	TLFPGTDHIDQLK	3	TLFPGTDHIDQLK3	868713	923745	917347
Q05096	Q05096	MYO1B_RAT	Myo1b	Unconventional myosin-Ib	1	TLFQLEDLRK	TLFQLEDLRK	3	TLFQLEDLRK3	17941.7	26091.7	15258.9
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	TLFQNDFWGTPMSEER	TLFQNDFWGTPMSEER	2	TLFQNDFWGTPMSEER2	25792.7	28915.3	23640.8
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	TLFQPQTGTYQTLAK	TLFQPQTGTYQTLAK	2	TLFQPQTGTYQTLAK2	29353.3	28706.9	59287.4
P85515	F7F067;P85515	ACTZ_RAT	Actr1a	Alpha-centractin	0	TLFSNIVLSGGSTLFK	TLFSNIVLSGGSTLFK	2	TLFSNIVLSGGSTLFK2	43171.9	38225.7	59861.5
P85515	F7F067;P85515	ACTZ_RAT	Actr1a	Alpha-centractin	0	TLFSNIVLSGGSTLFK	TLFSNIVLSGGSTLFK	3	TLFSNIVLSGGSTLFK3	84981.2	76467.9	85392.8
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	TLFSVLPGLK	TLFSVLPGLK	2	TLFSVLPGLK2	2.47467e+06	2.50889e+06	2.39294e+06
B5DFF2	B5DFF2	B5DFF2_RAT	Rbpms2	RNA binding protein, mRNA processing factor 2	1	TLFVSGLPVDIKPR	TLFVSGLPVDIKPR	2	TLFVSGLPVDIKPR2	14888.7	20210.8	13918.6
B5DFF2	B5DFF2	B5DFF2_RAT	Rbpms2	RNA binding protein, mRNA processing factor 2	1	TLFVSGLPVDIKPR	TLFVSGLPVDIKPR	3	TLFVSGLPVDIKPR3	192679	180133	190269
Q68FT3	Q68FT3	PYRD2_RAT	Pyroxd2	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2	1	TLGAQLPQYYEVLTAPISK	TLGAQLPQYYEVLTAPISK	3	TLGAQLPQYYEVLTAPISK3	3917.33	10569.9	7128.95
D4A748	D4A748	D4A748_RAT	Wdfy4	WDFY family member 4	1	TLGAVAVGQLGVR	TLGAVAVGQLGVR	2	TLGAVAVGQLGVR2	2527.73	3981.28	
A0A8I6A9M1	A0A8I6A9M1	A0A8I6A9M1_RAT	Cmip	C-Maf-inducing protein	1	TLGCHVEILK	TLGC(UniMod:4)HVEILK	3	TLGC(UniMod:4)HVEILK3	5149.86	10238.5	
Q4TU93	Q4TU93	MRC2_RAT	Mrc2	C-type mannose receptor 2	1	TLGDQLSLLLGAR	TLGDQLSLLLGAR	2	TLGDQLSLLLGAR2	2991.4	9046.82	2405.14
Q05030	Q05030	PGFRB_RAT	Pdgfrb	Platelet-derived growth factor receptor beta	1	TLGDSSAGELVLSTR	TLGDSSAGELVLSTR	2	TLGDSSAGELVLSTR2	13752.7	13175.6	9730.84
Q05030	Q05030	PGFRB_RAT	Pdgfrb	Platelet-derived growth factor receptor beta	1	TLGDSSAGELVLSTR	TLGDSSAGELVLSTR	3	TLGDSSAGELVLSTR3			7400.5
Q562B5	Q562B5	PGAM5_RAT	Pgam5	Serine/threonine-protein phosphatase PGAM5, mitochondrial	1	TLGDTGFMPPDK	TLGDTGFMPPDK	2	TLGDTGFMPPDK2	22865.5	15995.2	15183.8
A0A8I6G3S1	A0A8I6G3S1	A0A8I6G3S1_RAT	Mon1b	Vacuolar fusion protein MON1 homolog	1	TLGEAASFSNGPAANAPAYSVQAVGAPGLR	TLGEAASFSNGPAANAPAYSVQAVGAPGLR	3	TLGEAASFSNGPAANAPAYSVQAVGAPGLR3	1285.42		3772.22
P62870	A0A8I6AGE5;A0A8I5ZKZ8;A0A8I6AA09;M0R6V0;P62870;F1LZ51;A0A8I6GJ22;A0A8I6GLA7;A0A8I5ZTT3	ELOB_RAT	Elob	Elongin-B	0	TLGECGFTSQTAR	TLGEC(UniMod:4)GFTSQTAR	2	TLGEC(UniMod:4)GFTSQTAR2	54626.6	49541.8	54113
P62870	P62870;F1LZ51;A0A8I5ZTT3	ELOB_RAT	Elob	Elongin-B	0	TLGECGFTSQTARPQAPATVGLAFR	TLGEC(UniMod:4)GFTSQTARPQAPATVGLAFR	3	TLGEC(UniMod:4)GFTSQTARPQAPATVGLAFR3	156379	141505	146820
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	TLGEKAKPALDDLGQGLMPVLEAWK	TLGEKAKPALDDLGQGLMPVLEAWK	3	TLGEKAKPALDDLGQGLMPVLEAWK3	35282.4	27725.6	32706
Q5M9F5	Q5M9F5	DPH6_RAT	Dph6	Diphthine--ammonia ligase	1	TLGEMEPYLLELSK	TLGEMEPYLLELSK	2	TLGEMEPYLLELSK2	3705.86		2081.81
D4A4P4	D4A4P4	D4A4P4_RAT	Flad1	FAD synthase	1	TLGGEGWEK	TLGGEGWEK	2	TLGGEGWEK2	17885.4		24371.4
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	TLGGLEMELR	TLGGLEMELR	2	TLGGLEMELR2	931493	1.10622e+06	1.02152e+06
F7FNG5	F7FNG5	F7FNG5_RAT	Cul4a	Cullin 4A	1	TLGHNLLVSELYNQLK	TLGHNLLVSELYNQLK	3	TLGHNLLVSELYNQLK3	9876.14	8399.58	7579.45
O08651	O08651	SERA_RAT	Phgdh	D-3-phosphoglycerate dehydrogenase	1	TLGILGLGR	TLGILGLGR	2	TLGILGLGR2	26039.7	22201.2	23569.2
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	TLGLFQHHDAITGTAK	TLGLFQHHDAITGTAK	3	TLGLFQHHDAITGTAK3	38981.8	21816	31774.3
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	TLGLFQHHDAITGTAK	TLGLFQHHDAITGTAK	4	TLGLFQHHDAITGTAK4		13652.3	9128.61
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	TLGLGQEWR	TLGLGQEWR	2	TLGLGQEWR2	40674.6	31108	51293.4
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	TLGLSSHCEPVTLLLPACVEDSVTPITLR	TLGLSSHC(UniMod:4)EPVTLLLPAC(UniMod:4)VEDSVTPITLR	4	TLGLSSHC(UniMod:4)EPVTLLLPAC(UniMod:4)VEDSVTPITLR4	7529.19	8981.98	10531.4
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	TLGMVYIYDGK	TLGMVYIYDGK	2	TLGMVYIYDGK2	127848	128120	130844
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	TLGPKPGSTPPVPENDLKPGFSK	TLGPKPGSTPPVPENDLKPGFSK	3	TLGPKPGSTPPVPENDLKPGFSK3	255580	212850	179897
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	TLGPKPGSTPPVPENDLKPGFSK	TLGPKPGSTPPVPENDLKPGFSK	4	TLGPKPGSTPPVPENDLKPGFSK4	1.44192e+06	1.62159e+06	2.01978e+06
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	TLGPSWVHYQCMLR	TLGPSWVHYQC(UniMod:4)MLR	3	TLGPSWVHYQC(UniMod:4)MLR3	38424.3	47447.1	57136.3
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	TLGQPIK	TLGQPIK	1	TLGQPIK1	11773.3	9425.85	10774.2
Q68FX1	Q68FX1	MPI_RAT	Mpi	Mannose-6-phosphate isomerase	1	TLGQWIAENQNSLGQK	TLGQWIAENQNSLGQK	2	TLGQWIAENQNSLGQK2	3964.04	7544.83	1408.63
P36511	P36511	UDB15_RAT	Ugt2b15	UDP-glucuronosyltransferase 2B15	1	TLGRPTTLAEIMGK	TLGRPTTLAEIMGK	3	TLGRPTTLAEIMGK3	4580.11	7024.38	5316.98
P68182	P68182;P27791	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	0	TLGTGSFGR	TLGTGSFGR	2	TLGTGSFGR2	1.05419e+06	1.2121e+06	1.24616e+06
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	TLGTPEFVTATDCVHYFEWR	TLGTPEFVTATDC(UniMod:4)VHYFEWR	3	TLGTPEFVTATDC(UniMod:4)VHYFEWR3	137559	118316	88002
A0A0G2K2B7	A0A0G2K2B7	A0A0G2K2B7_RAT	Wdr20	WD repeat domain 20	1	TLGTSLCPR	TLGTSLC(UniMod:4)PR	2	TLGTSLC(UniMod:4)PR2	21757.2	24799.1	16282.5
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	TLGVDLVALATR	TLGVDLVALATR	2	TLGVDLVALATR2	39300.6	51819.7	46497.7
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	TLGVRPDDDLLFTVFSK	TLGVRPDDDLLFTVFSK	3	TLGVRPDDDLLFTVFSK3	86352.1	75318.9	107433
Q5RJM1	Q5RJM1	PORED_RAT	Srd5a3	Polyprenol reductase	1	TLGVTQFQALGMESK	TLGVTQFQALGMESK	2	TLGVTQFQALGMESK2	13662.2	14828.4	12992.8
A0A0G2QC02	A0A0G2QC02	A0A0G2QC02_RAT	Skic2	Ski2 like RNA helicase	1	TLGYVDEAGTVK	TLGYVDEAGTVK	2	TLGYVDEAGTVK2	7442.57	7441.25	2775.4
F7EM42	F7EM42	F7EM42_RAT	Sash3	SAM and SH3 domain containing 3	1	TLHELLER	TLHELLER	2	TLHELLER2	27620.1	16426.2	19445.5
D3ZU52	D3ZU52;A0A8I6GIJ6	D3ZU52_RAT	Cops7b	COP9 signalosome subunit 7B	0	TLHEWCDGCEAVLLGIEQQVLR	TLHEWC(UniMod:4)DGC(UniMod:4)EAVLLGIEQQVLR	3	TLHEWC(UniMod:4)DGC(UniMod:4)EAVLLGIEQQVLR3	4985.98	3765.39	9901.12
Q6AY63	Q6AY63	NUDT5_RAT	Nudt5	ADP-sugar pyrophosphatase	1	TLHHECIVLVK	TLHHEC(UniMod:4)IVLVK	2	TLHHEC(UniMod:4)IVLVK2	1551.08		
Q6AY63	Q6AY63	NUDT5_RAT	Nudt5	ADP-sugar pyrophosphatase	1	TLHHECIVLVK	TLHHEC(UniMod:4)IVLVK	3	TLHHEC(UniMod:4)IVLVK3	5897.14	7881.11	5153.93
D4A544	D4A544	D4A544_RAT	Dennd6a	DENN domain containing 6A	1	TLHLPIMGLVMK	TLHLPIMGLVMK	3	TLHLPIMGLVMK3	5581.19	3868.08	4682.2
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	TLHLPVSTTLSDVLDR	TLHLPVSTTLSDVLDR	3	TLHLPVSTTLSDVLDR3	19854.3	14667.5	15927.5
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	TLHLTCK	TLHLTC(UniMod:4)K	2	TLHLTC(UniMod:4)K2	2705.6	3337.4	
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	TLHNLVIQYAAQGR	TLHNLVIQYAAQGR	2	TLHNLVIQYAAQGR2	1722.7		
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	TLHNLVIQYAAQGR	TLHNLVIQYAAQGR	3	TLHNLVIQYAAQGR3	35411.7	53156.1	48818.1
P37285	A0A8I5Y868;Q68G30;P37285	KLC1_RAT	Klc1	Kinesin light chain 1	0	TLHNLVIQYASQGR	TLHNLVIQYASQGR	2	TLHNLVIQYASQGR2	12167.7	10425.3	12701
P37285	A0A8I5Y868;Q68G30;P37285	KLC1_RAT	Klc1	Kinesin light chain 1	0	TLHNLVIQYASQGR	TLHNLVIQYASQGR	3	TLHNLVIQYASQGR3	139303	148868	154702
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	TLHPAVHAGILAR	TLHPAVHAGILAR	3	TLHPAVHAGILAR3	32848.4	18207.3	20031.8
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	TLHPLLEDGCIEDDPAPYK	TLHPLLEDGC(UniMod:4)IEDDPAPYK	3	TLHPLLEDGC(UniMod:4)IEDDPAPYK3		4953.47	
A0A8I6A9R8	A0A8I6A9R8	A0A8I6A9R8_RAT	Cope	Coatomer subunit epsilon	1	TLHQGDGLECTAMTIQILLK	TLHQGDGLEC(UniMod:4)TAMTIQILLK	3	TLHQGDGLEC(UniMod:4)TAMTIQILLK3	45842.3	35329.1	41917.8
A0A8I6A9R8	A0A8I6A9R8	A0A8I6A9R8_RAT	Cope	Coatomer subunit epsilon	1	TLHQGDGLECTAMTIQILLK	TLHQGDGLEC(UniMod:4)TAMTIQILLK	4	TLHQGDGLEC(UniMod:4)TAMTIQILLK4		2353.84	
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	TLHQGEDSLLELTK	TLHQGEDSLLELTK	3	TLHQGEDSLLELTK3	7330.44	4424.06	10476.7
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	TLHSCSVR	TLHSC(UniMod:4)SVR	2	TLHSC(UniMod:4)SVR2			8865.52
Q5FWY5	Q5FWY5	AIP_RAT	Aip	AH receptor-interacting protein	1	TLHSDPEGSVIDDSR	TLHSDPEGSVIDDSR	2	TLHSDPEGSVIDDSR2	2251.71	1305.02	
Q5FWY5	Q5FWY5	AIP_RAT	Aip	AH receptor-interacting protein	1	TLHSDPEGSVIDDSR	TLHSDPEGSVIDDSR	3	TLHSDPEGSVIDDSR3	17140.7	17798.8	13516
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	TLHSFVR	TLHSFVR	2	TLHSFVR2	15141.7	20537.3	10350.4
A0A0G2JZA7	A0A0G2JZA7	A0A0G2JZA7_RAT	Cemip2	hyaluronoglucosaminidase	1	TLHSSGLPFGSYAFEK	TLHSSGLPFGSYAFEK	3	TLHSSGLPFGSYAFEK3	4377.08	7165.17	7203.86
A0A8I6ADA8	A0A8I6ADA8	A0A8I6ADA8_RAT	Abhd4	Abhydrolase domain containing 4, N-acyl phospholipase B	1	TLHTFDLLGFGR	TLHTFDLLGFGR	2	TLHTFDLLGFGR2	2099.26	4873.42	
A0A8I6ADA8	A0A8I6ADA8	A0A8I6ADA8_RAT	Abhd4	Abhydrolase domain containing 4, N-acyl phospholipase B	1	TLHTFDLLGFGR	TLHTFDLLGFGR	3	TLHTFDLLGFGR3	87602.8	74255.8	64358.1
Q566R0	Q566R0	THEM4_RAT	Them4	Acyl-coenzyme A thioesterase THEM4	1	TLHTQATALFIK	TLHTQATALFIK	3	TLHTQATALFIK3	3092.64	4008.85	6683.17
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TLHTTASNWLHLIPQTLSPLK	TLHTTASNWLHLIPQTLSPLK	3	TLHTTASNWLHLIPQTLSPLK3	30819.9	50486.9	37673
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TLHTTASNWLHLIPQTLSPLK	TLHTTASNWLHLIPQTLSPLK	4	TLHTTASNWLHLIPQTLSPLK4	86097.2	120282	86723.5
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TLHTTASNWLHLIPQTLSPLKR	TLHTTASNWLHLIPQTLSPLKR	3	TLHTTASNWLHLIPQTLSPLKR3	15310.2	15062	9891.57
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TLHTTASNWLHLIPQTLSPLKR	TLHTTASNWLHLIPQTLSPLKR	4	TLHTTASNWLHLIPQTLSPLKR4	48165.1	58280.1	52375.8
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	TLHVEEVVPSVIEPSFGLGR	TLHVEEVVPSVIEPSFGLGR	3	TLHVEEVVPSVIEPSFGLGR3	23954.3	18999.7	20237.6
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	TLIDVLQPLIAEHQAR	TLIDVLQPLIAEHQAR	2	TLIDVLQPLIAEHQAR2	7963.71	7063.05	
Q6P7B0	Q6P7B0	SYWC_RAT	Wars1	Tryptophan--tRNA ligase, cytoplasmic	1	TLIDVLQPLIAEHQAR	TLIDVLQPLIAEHQAR	3	TLIDVLQPLIAEHQAR3	50501.3	42358.3	44933.8
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	TLIEFLLR	TLIEFLLR	2	TLIEFLLR2	32302	47126.2	37795.5
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	TLIEKTNAERK	TLIEKTNAERK	3	TLIEKTNAERK3	56003.7	130859	136078
P17955	P17955	NUP62_RAT	Nup62	Nuclear pore glycoprotein p62	1	TLIENGEK	TLIENGEK	2	TLIENGEK2	14852.8	14677.5	9882.46
D4AB70	D4AB70	D4AB70_RAT	Edem3	alpha-1,2-Mannosidase	1	TLIENLNK	TLIENLNK	2	TLIENLNK2	14069.2	12923.9	
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	TLIEQIEQR	TLIEQIEQR	2	TLIEQIEQR2	46231.2	42550.1	60081
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	TLIEVMPK	TLIEVMPK	2	TLIEVMPK2	57507.1	61829.6	44234.2
D3ZWB1	D3ZWB1	D3ZWB1_RAT	Lsm1	U6 snRNA-associated Sm-like protein LSm1	1	TLIGFLR	TLIGFLR	2	TLIGFLR2	27729.3	23845.4	26512.7
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	TLIGHVPEQR	TLIGHVPEQR	2	TLIGHVPEQR2	16520.9	11696.4	4162.89
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	TLIGHVPEQR	TLIGHVPEQR	3	TLIGHVPEQR3	249993	264121	217331
Q03555	Q03555	GEPH_RAT	Gphn	Gephyrin	1	TLIINLPGSK	TLIINLPGSK	2	TLIINLPGSK2	4823.02	8071.62	3109.72
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	TLILESQNWR	TLILESQNWR	2	TLILESQNWR2	58397.2	53070.5	53398.4
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	TLILSTHHLDEAELLGDR	TLILSTHHLDEAELLGDR	4	TLILSTHHLDEAELLGDR4	6699.36	2196.36	7654.39
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	TLINAEDPPMIVVR	TLINAEDPPMIVVR	2	TLINAEDPPMIVVR2	63544.7	70525.7	87879.3
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	TLINAEDPPMIVVR	TLINAEDPPMIVVR	3	TLINAEDPPMIVVR3	4691.89	5460.27	8490.11
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TLINELVK	TLINELVK	2	TLINELVK2	577508	657408	567108
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	TLIPHPTQEATNSPK	TLIPHPTQEATNSPK	3	TLIPHPTQEATNSPK3	9545.4	21745.6	16770.4
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	TLIPLDEVK	TLIPLDEVK	2	TLIPLDEVK2	24495.5	27000.2	31830.3
A0A0G2JV12	A0A0G2JV12	A0A0G2JV12_RAT	Col15a1	Collagen type XV alpha 1 chain	1	TLIPSTFFR	TLIPSTFFR	2	TLIPSTFFR2	19519.9	19276.5	15083.3
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	TLIQCLGSVGR	TLIQC(UniMod:4)LGSVGR	2	TLIQC(UniMod:4)LGSVGR2	15315.9	20659.3	18610.3
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	TLIQNCGASTIR	TLIQNC(UniMod:4)GASTIR	2	TLIQNC(UniMod:4)GASTIR2	242518	206381	191663
O08770	O08770	GPV_RAT	Gp5	Platelet glycoprotein V	1	TLIREELLFEAMGK	TLIREELLFEAMGK	2	TLIREELLFEAMGK2	11167.9	6631.34	9782.46
O08770	O08770	GPV_RAT	Gp5	Platelet glycoprotein V	1	TLIREELLFEAMGK	TLIREELLFEAMGK	3	TLIREELLFEAMGK3	86146.4	120158	117480
A0A8I6AA52	A0A8I6AA52	A0A8I6AA52_RAT	Wdr48	WD repeat-containing protein 48	1	TLISASSDTTVK	TLISASSDTTVK	2	TLISASSDTTVK2	13692.9	5941.66	7912.62
D4A0Z1	D4A0Z1	D4A0Z1_RAT	Tspan14	Tetraspanin	1	TLISDIEAVK	TLISDIEAVK	2	TLISDIEAVK2	91321.5	63403.4	101395
O70467	O70467	ANM3_RAT	Prmt3	Protein arginine N-methyltransferase 3	1	TLISDPCDIK	TLISDPC(UniMod:4)DIK	2	TLISDPC(UniMod:4)DIK2	27210.9	37190.7	23208.1
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	TLISENAIFHVDLVSK	TLISENAIFHVDLVSK	3	TLISENAIFHVDLVSK3	5017.81	5331.12	
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	TLISGMIDEPHAIVVDPLR	TLISGMIDEPHAIVVDPLR	3	TLISGMIDEPHAIVVDPLR3	136558	144688	136925
Q7TSU1	D4A631;Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	0	TLITVAHTDGNYLGNSWHEILK	TLITVAHTDGNYLGNSWHEILK	3	TLITVAHTDGNYLGNSWHEILK3	9746.41	8979.99	8392.05
Q7TSU1	D4A631;Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	0	TLITVAHTDGNYLGNSWHEILK	TLITVAHTDGNYLGNSWHEILK	4	TLITVAHTDGNYLGNSWHEILK4	51939.4	54537.7	53313.4
A0A0G2K8D1	A0A0G2K8D1	A0A0G2K8D1_RAT	Mospd2	Motile sperm domain containing 2	1	TLIVLTNVTK	TLIVLTNVTK	2	TLIVLTNVTK2	40536.4	38829.1	36283.6
P51111	P51111	HD_RAT	Htt	Huntingtin	1	TLKDESSVTCK	TLKDESSVTC(UniMod:4)K	3	TLKDESSVTC(UniMod:4)K3		10243	
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	TLKEEQTR	TLKEEQTR	2	TLKEEQTR2			11882.5
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	TLKPGTMSAQAFLEEANLMK	TLKPGTMSAQAFLEEANLMK	3	TLKPGTMSAQAFLEEANLMK3	212803	232665	181197
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	TLKPGTMSAQAFLEEANLMK	TLKPGTMSAQAFLEEANLMK	4	TLKPGTMSAQAFLEEANLMK4	2306.43	3323.22	
Q9WUD9	Q9WUD9	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	1	TLKPGTMSPEAFLQEAQVMK	TLKPGTMSPEAFLQEAQVMK	3	TLKPGTMSPEAFLQEAQVMK3	304855	295635	334289
Q9WUD9	Q9WUD9	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	1	TLKPGTMSPEAFLQEAQVMKK	TLKPGTMSPEAFLQEAQVMKK	4	TLKPGTMSPEAFLQEAQVMKK4	4416.8	7880.93	3182.56
Q62844	Q62844	FYN_RAT	Fyn	Tyrosine-protein kinase Fyn	1	TLKPGTMSPESFLEEAQIMK	TLKPGTMSPESFLEEAQIMK	3	TLKPGTMSPESFLEEAQIMK3	27894.9	27491.7	24851.9
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	TLLADDAQK	TLLADDAQK	2	TLLADDAQK2	116873	114485	121244
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TLLAPLR	TLLAPLR	2	TLLAPLR2	472012	580966	477669
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TLLAPLRDFYSEYSVTAADFASK	TLLAPLRDFYSEYSVTAADFASK	3	TLLAPLRDFYSEYSVTAADFASK3	72514.1	108907	109380
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	TLLAQANSK	TLLAQANSK	2	TLLAQANSK2	116158	124047	119438
Q5U2U0	Q5U2U0	CLPX_RAT	Clpx	ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial	1	TLLAQTLAK	TLLAQTLAK	2	TLLAQTLAK2	9961.8	10674.8	9669.44
O35346	O35346	FAK1_RAT	Ptk2	Focal adhesion kinase 1	1	TLLATVDETIPILPASTHR	TLLATVDETIPILPASTHR	3	TLLATVDETIPILPASTHR3	19650.2	19126.3	17659.5
A0A0G2K1P3	A0A0G2K1P3	A0A0G2K1P3_RAT	Bnip2	BCL2 interacting protein 2	1	TLLAVTRPFISSK	TLLAVTRPFISSK	3	TLLAVTRPFISSK3	174705	166610	127499
Q8VHI8	Q8VHI8	SEC20_RAT	Bnip1	Vesicle transport protein SEC20	1	TLLDANEEFK	TLLDANEEFK	2	TLLDANEEFK2	16750.6	20003.1	26430.2
Q769K2	Q769K2	NAPEP_RAT	Napepld	N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D	1	TLLDDNK	TLLDDNK	2	TLLDDNK2	52369.6	32260.2	46920.2
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	TLLECVR	TLLEC(UniMod:4)VR	2	TLLEC(UniMod:4)VR2	20667	24220.5	17698.3
P86172	P86172	NMRL1_RAT	Nmral1	NmrA-like family domain-containing protein 1	1	TLLEDGTFR	TLLEDGTFR	2	TLLEDGTFR2	6620.86	4406.44	8723.5
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	TLLEELASQLDR	TLLEELASQLDR	2	TLLEELASQLDR2	6354.69	11901.2	5561.44
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	TLLELASESDVSTAIDLLR	TLLELASESDVSTAIDLLR	3	TLLELASESDVSTAIDLLR3	40090.8	36970.8	23903.1
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	TLLELIPELR	TLLELIPELR	2	TLLELIPELR2	33407.7	38527.6	28696.6
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	TLLENTAITIGR	TLLENTAITIGR	2	TLLENTAITIGR2	146528	178257	153238
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	TLLENVLKPLHFTYSSCPEGAR	TLLENVLKPLHFTYSSC(UniMod:4)PEGAR	3	TLLENVLKPLHFTYSSC(UniMod:4)PEGAR3	6934.5	3796.11	5500.09
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	TLLENVLKPLHFTYSSCPEGAR	TLLENVLKPLHFTYSSC(UniMod:4)PEGAR	4	TLLENVLKPLHFTYSSC(UniMod:4)PEGAR4	42456.1	34263.5	48609.6
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	TLLEQFGDR	TLLEQFGDR	2	TLLEQFGDR2	23185.6	21330.9	23640.3
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	TLLEQLGGSGH	TLLEQLGGSGH	2	TLLEQLGGSGH2	242155	231052	278619
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	TLLFETQK	TLLFETQK	2	TLLFETQK2	31560	30671.3	24274.5
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	TLLFSGQK	TLLFSGQK	1	TLLFSGQK1	3813.63	4772.03	3007.39
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	TLLFSGQK	TLLFSGQK	2	TLLFSGQK2	703523	894915	777965
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	TLLFTFNVPGSGNTYPK	TLLFTFNVPGSGNTYPK	2	TLLFTFNVPGSGNTYPK2	23135.6	29292.1	29942.8
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	TLLFTFNVPGSGNTYPK	TLLFTFNVPGSGNTYPK	3	TLLFTFNVPGSGNTYPK3	4548.65	9680.81	11994.4
Q5M860	Q5M860	Q5M860_RAT	Arhgdib	Rho GDP dissociation inhibitor beta	1	TLLGDVPVVADPTVPNVTVTR	TLLGDVPVVADPTVPNVTVTR	3	TLLGDVPVVADPTVPNVTVTR3	55199.6	46969.7	77019.8
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	TLLGHGCLVDFQDR	TLLGHGC(UniMod:4)LVDFQDR	2	TLLGHGC(UniMod:4)LVDFQDR2	2870.1		
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	TLLGHGCLVDFQDR	TLLGHGC(UniMod:4)LVDFQDR	3	TLLGHGC(UniMod:4)LVDFQDR3	14584.9	10054.1	14446.5
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	TLLGLPPLPEDSIK	TLLGLPPLPEDSIK	2	TLLGLPPLPEDSIK2	135531	133029	161065
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	TLLGSHGQELLIEGTSLVCMK	TLLGSHGQELLIEGTSLVC(UniMod:4)MK	3	TLLGSHGQELLIEGTSLVC(UniMod:4)MK3	8711.4	17144.3	12005.8
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	TLLGVILNISCLLK	TLLGVILNISC(UniMod:4)LLK	2	TLLGVILNISC(UniMod:4)LLK2			3820.17
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	TLLHLAVSLGHLESAR	TLLHLAVSLGHLESAR	4	TLLHLAVSLGHLESAR4	7023.47	16512.5	11291.5
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	TLLHTLCK	TLLHTLC(UniMod:4)K	2	TLLHTLC(UniMod:4)K2	20149.2	22522.5	12679
D4A8B0	D4A8B0	D4A8B0_RAT	Sec14l5	SEC14-like lipid binding 5	1	TLLIDAHNETFASR	TLLIDAHNETFASR	3	TLLIDAHNETFASR3	23612.9	17250.4	18735.4
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	TLLILFKPLISFK	TLLILFKPLISFK	3	TLLILFKPLISFK3	3765.72	3793.44	6935.53
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	TLLISTLHR	TLLISTLHR	2	TLLISTLHR2	23133.5	27017.4	21531.3
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	TLLISTLHRPMDLHVFHALR	TLLISTLHRPMDLHVFHALR	3	TLLISTLHRPMDLHVFHALR3		7324.95	8718.8
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	TLLISTLHRPMDLHVFHALR	TLLISTLHRPMDLHVFHALR	4	TLLISTLHRPMDLHVFHALR4	63241	80482.2	48323
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	TLLIVSHDQGFLDDVCTDIIHLDTQR	TLLIVSHDQGFLDDVC(UniMod:4)TDIIHLDTQR	4	TLLIVSHDQGFLDDVC(UniMod:4)TDIIHLDTQR4	13807.1	14710	22282.3
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	TLLLAFDNTK	TLLLAFDNTK	2	TLLLAFDNTK2	13976.5	11483.5	11387.7
D3ZX06	D3ZX06	D3ZX06_RAT	Ghdc	GH3 domain containing	1	TLLLEALISPGLR	TLLLEALISPGLR	2	TLLLEALISPGLR2	2373.88		3209.04
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	TLLLEFQNESR	TLLLEFQNESR	2	TLLLEFQNESR2	82476.6	117264	97349.7
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	TLLLMSFTK	TLLLMSFTK	2	TLLLMSFTK2	15825.1	13544.5	10715.6
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	TLLLNHMVK	TLLLNHMVK	2	TLLLNHMVK2	98879.5	84793.5	85166.9
A0A8I5ZYB9	A0A8I5ZYB9	A0A8I5ZYB9_RAT	Lrrc32	Leucine rich repeat containing 32	1	TLLLQDNTLR	TLLLQDNTLR	2	TLLLQDNTLR2	223806	167905	178256
A0A0G2K3L8	A0A0G2K3L8	A0A0G2K3L8_RAT	Wdfy1	WD repeat and FYVE domain containing 1	1	TLLLQGHHDR	TLLLQGHHDR	3	TLLLQGHHDR3	38825.1	41790.4	41231.6
A0A8I6A3H1	A0A8I6A3H1	A0A8I6A3H1_RAT	Ero1b	Endoplasmic reticulum oxidoreductase 1 beta	1	TLLLSIFQDTK	TLLLSIFQDTK	2	TLLLSIFQDTK2	14722.4	6095.14	
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	TLLLSLLATEIER	TLLLSLLATEIER	2	TLLLSLLATEIER2	3354.56	2457.3	
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	TLLLTPVGTHLTNESVCEIMQSCFR	TLLLTPVGTHLTNESVC(UniMod:4)EIMQSC(UniMod:4)FR	3	TLLLTPVGTHLTNESVC(UniMod:4)EIMQSC(UniMod:4)FR3	6492.58		3612.64
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	TLLLVLNK	TLLLVLNK	2	TLLLVLNK2	5358.12	4452.64	3465.57
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	TLLLYTVPAVQGFFR	TLLLYTVPAVQGFFR	2	TLLLYTVPAVQGFFR2	12013.3	2427.85	10010.4
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	TLLNGESGQAK	TLLNGESGQAK	2	TLLNGESGQAK2	279370	283671	291452
Q63448	Q63448	ACOX3_RAT	Acox3	Peroxisomal acyl-coenzyme A oxidase 3	1	TLLPMPGVMVGDMGK	TLLPMPGVMVGDMGK	2	TLLPMPGVMVGDMGK2	24115.4	21227.4	41672.8
Q5FVF4	Q5FVF4	TM7S3_RAT	Tm7sf3	Transmembrane 7 superfamily member 3	1	TLLPSTSGTGNDR	TLLPSTSGTGNDR	2	TLLPSTSGTGNDR2	38589.1	30981.7	41379.7
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	TLLQEQLHALSNDIK	TLLQEQLHALSNDIK	3	TLLQEQLHALSNDIK3			22425.2
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	TLLQEQLHALSNDIKK	TLLQEQLHALSNDIKK	4	TLLQEQLHALSNDIKK4	7953.7	14868.1	11658.8
E9PSP1	E9PSP1	E9PSP1_RAT	Pltp	Phospholipid transfer protein	1	TLLQIGVMPLLNER	TLLQIGVMPLLNER	2	TLLQIGVMPLLNER2	933189	881355	642267
E9PSP1	E9PSP1	E9PSP1_RAT	Pltp	Phospholipid transfer protein	1	TLLQIGVMPLLNER	TLLQIGVMPLLNER	3	TLLQIGVMPLLNER3	175471	172968	110522
P0DN35	P0DN35	NDUB1_RAT	Ndufb1	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1	1	TLLQLVR	TLLQLVR	2	TLLQLVR2	22488.6	17955.7	29955.4
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	TLLQQNQQLK	TLLQQNQQLK	2	TLLQQNQQLK2	20493.3		14329.1
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TLLRDEKK	TLLRDEKK	2	TLLRDEKK2	8755.44		
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	TLLRPEEILLSIEIPYSK	TLLRPEEILLSIEIPYSK	3	TLLRPEEILLSIEIPYSK3	52555.2	57800.3	44205.9
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	TLLSDPTYR	TLLSDPTYR	2	TLLSDPTYR2	89021.6	79554.7	100435
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	TLLSETSSPSSK	TLLSETSSPSSK	2	TLLSETSSPSSK2	76270.7	89923.1	73945.6
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	TLLSLCGAEK	TLLSLC(UniMod:4)GAEK	2	TLLSLC(UniMod:4)GAEK2	23958.7	25613.8	29687
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	TLLSSLGITR	TLLSSLGITR	2	TLLSSLGITR2	3521.08	9446.74	12004.9
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	TLLSSQLEMER	TLLSSQLEMER	2	TLLSSQLEMER2	6384.99	9413.61	7660.93
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	TLLSVPGYK	TLLSVPGYK	2	TLLSVPGYK2	135553	139524	150939
A1L1J9	A1L1J9	LMF2_RAT	Lmf2	Lipase maturation factor 2	1	TLLTPRPLQSSK	TLLTPRPLQSSK	3	TLLTPRPLQSSK3	74335.5	78285.8	61307.4
P62250	P62250;A0A8I5YCD9	RS16_RAT	Rps16	Small ribosomal subunit protein uS9	0	TLLVADPR	TLLVADPR	2	TLLVADPR2	57211.9	49580.3	41399.4
A0A8I6A8Q1	A0A8I6A8Q1	A0A8I6A8Q1_RAT	A2ml1	Alpha-2-macroglobulin-like 1	1	TLLVEPEGIEK	TLLVEPEGIEK	2	TLLVEPEGIEK2	16059.1	16318.6	11818.7
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	TLLVNCQNK	TLLVNC(UniMod:4)QNK	2	TLLVNC(UniMod:4)QNK2	64540.3	67820.9	59111.6
B4F766	B4F766	DYM_RAT	Dym	Dymeclin	1	TLLYNFIR	TLLYNFIR	2	TLLYNFIR2	8434.51	9933.53	7298.95
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	TLMAQIDGVNLAANNLVESGHPR	TLMAQIDGVNLAANNLVESGHPR	3	TLMAQIDGVNLAANNLVESGHPR3	28531.1	45203.7	45201.4
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TLMAQSIYGGR	TLMAQSIYGGR	2	TLMAQSIYGGR2	292481	384918	355709
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	TLMAYAFALAGNQEK	TLMAYAFALAGNQEK	2	TLMAYAFALAGNQEK2	255303	356171	196882
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	TLMAYAFALAGNQEK	TLMAYAFALAGNQEK	3	TLMAYAFALAGNQEK3	760915	128675	267025
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	TLMAYAFALAGNQEKR	TLMAYAFALAGNQEKR	3	TLMAYAFALAGNQEKR3	24466.2	24080.6	15688.7
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	TLMEFITSR	TLMEFITSR	2	TLMEFITSR2	107520	129082	84997.9
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	TLMELLNQMDGFDTLHR	TLMELLNQMDGFDTLHR	3	TLMELLNQMDGFDTLHR3	33943.3	41354	53075.4
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	TLMEVMPK	TLMEVMPK	2	TLMEVMPK2	208060	224534	210682
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	TLMGWGVR	TLMGWGVR	2	TLMGWGVR2	42938.5	54245.2	41847.9
A0A8I6A0R8	A0A8I6A0R8	A0A8I6A0R8_RAT	Srl	Sarcalumenin	1	TLMLNEDKPADDYSAVLQR	TLMLNEDKPADDYSAVLQR	3	TLMLNEDKPADDYSAVLQR3	9235.55	10425.4	3298.79
Q63632	G3V6N7;Q63632;Q5RK27	S12A4_RAT	Slc12a4	Solute carrier family 12 member 4	0	TLMMEQR	TLMMEQR	2	TLMMEQR2	23386.7	22980.8	22705.4
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	TLMNAVSPLR	TLMNAVSPLR	2	TLMNAVSPLR2	41680	47843.8	48931.7
Q5XFX0	Q5XFX0	TAGL2_RAT	Tagln2	Transgelin-2	1	TLMNLGGLAVAR	TLMNLGGLAVAR	2	TLMNLGGLAVAR2	845681	790309	929341
Q5XFX0	Q5XFX0	TAGL2_RAT	Tagln2	Transgelin-2	1	TLMNLGGLAVAR	TLMNLGGLAVAR	3	TLMNLGGLAVAR3	17018.2	22202.6	11277.3
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	TLMSSSQATASSCNK	TLMSSSQATASSC(UniMod:4)NK	2	TLMSSSQATASSC(UniMod:4)NK2	6498.63	2746.33	
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	TLNADLMMFAHK	TLNADLMMFAHK	3	TLNADLMMFAHK3	3825.58	2316.62	942.364
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	TLNAHEHFVTSLDFHK	TLNAHEHFVTSLDFHK	4	TLNAHEHFVTSLDFHK4	6151.13	4343.02	4514.92
A0A0G2JXD9	A0A0G2JXD9	A0A0G2JXD9_RAT	Dop1b	DOP1 leucine zipper like protein B	1	TLNCAFK	TLNC(UniMod:4)AFK	2	TLNC(UniMod:4)AFK2	11755		10964.8
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	TLNCMIGQMK	TLNC(UniMod:4)MIGQMK	2	TLNC(UniMod:4)MIGQMK2	19279.9	24656.6	24223.5
D4A1Y5	D4A1Y5	D4A1Y5_RAT	Mthfd2	methenyltetrahydrofolate cyclohydrolase	1	TLNDDENVDGLLVQLPLPEHIDER	TLNDDENVDGLLVQLPLPEHIDER	3	TLNDDENVDGLLVQLPLPEHIDER3	39274.3	26770.6	22455.5
D4A1Y5	D4A1Y5	D4A1Y5_RAT	Mthfd2	methenyltetrahydrofolate cyclohydrolase	1	TLNDDENVDGLLVQLPLPEHIDERK	TLNDDENVDGLLVQLPLPEHIDERK	4	TLNDDENVDGLLVQLPLPEHIDERK4	1642.03	3254.82	12388.4
P63039	P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	1	TLNDELEIIEGMK	TLNDELEIIEGMK	2	TLNDELEIIEGMK2	342765	319954	384591
P63039	P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	1	TLNDELEIIEGMK	TLNDELEIIEGMK	3	TLNDELEIIEGMK3	48392.2	38737.6	51099.9
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	TLNEADCATVPPAIR	TLNEADC(UniMod:4)ATVPPAIR	2	TLNEADC(UniMod:4)ATVPPAIR2	33290.4	35549.5	36580.2
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	TLNEETR	TLNEETR	2	TLNEETR2	89980.8	81460.3	101732
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	TLNEWDSR	TLNEWDSR	2	TLNEWDSR2	253859	282371	262794
P48508	P48508	GSH0_RAT	Gclm	Glutamate--cysteine ligase regulatory subunit	1	TLNEWSSQISPDLVR	TLNEWSSQISPDLVR	2	TLNEWSSQISPDLVR2	15427.7	16073.1	15348
P05544	P05544	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	1	TLNFNRPFMVVITDMDSQSILFVAK	TLNFNRPFMVVITDMDSQSILFVAK	3	TLNFNRPFMVVITDMDSQSILFVAK3	64211.1	70544.4	75639.5
P05544	P05544	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	1	TLNFNRPFMVVITDMDSQSILFVAKITNPK	TLNFNRPFMVVITDMDSQSILFVAKITNPK	4	TLNFNRPFMVVITDMDSQSILFVAKITNPK4	5418.27	11645.4	6190.68
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	TLNIFLTK	TLNIFLTK	2	TLNIFLTK2	44183.4	56375	58521.1
Q4G017	Q4G017	NISCH_RAT	Nisch	Nischarin	1	TLNLAGNFLER	TLNLAGNFLER	2	TLNLAGNFLER2	11906.2	7275.58	16583.4
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	TLNLAQNLLTQLPK	TLNLAQNLLTQLPK	2	TLNLAQNLLTQLPK2	3.18293e+06	2.39969e+06	2.41055e+06
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	TLNLAQNLLTQLPK	TLNLAQNLLTQLPK	3	TLNLAQNLLTQLPK3	317809	226679	219432
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	TLNLDNYVIFGGHLR	TLNLDNYVIFGGHLR	3	TLNLDNYVIFGGHLR3	10580.3	14628.9	7575.56
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	TLNLGQNCIASLPEK	TLNLGQNC(UniMod:4)IASLPEK	2	TLNLGQNC(UniMod:4)IASLPEK2	23995	28120.2	34302.5
Q6AYQ1	Q6AYQ1	GOGA7_RAT	Golga7	Golgin subfamily A member 7	1	TLNNLYAEAEK	TLNNLYAEAEK	2	TLNNLYAEAEK2	24232.8	10018.7	22242.2
A0A0G2K4H7	A0A0G2K4H7	A0A0G2K4H7_RAT	Krt78	Keratin 78	1	TLNNQFASFIDK	TLNNQFASFIDK	2	TLNNQFASFIDK2	26977.1	52208.4	25652
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	TLNNQPVFEYILHCLR	TLNNQPVFEYILHC(UniMod:4)LR	3	TLNNQPVFEYILHC(UniMod:4)LR3	4688.15		
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	TLNPEFNER	TLNPEFNER	2	TLNPEFNER2	377030	352445	435814
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	TLNPEFNERFEWDLPLDGTLR	TLNPEFNERFEWDLPLDGTLR	3	TLNPEFNERFEWDLPLDGTLR3	7249.24	21331.9	31133.3
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	TLNPHYNHTFVYNGVR	TLNPHYNHTFVYNGVR	2	TLNPHYNHTFVYNGVR2	4835.8	5072.3	
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	TLNPHYNHTFVYNGVR	TLNPHYNHTFVYNGVR	3	TLNPHYNHTFVYNGVR3	33520.6	47403.1	21039.1
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	TLNPHYNHTFVYNGVR	TLNPHYNHTFVYNGVR	4	TLNPHYNHTFVYNGVR4	92687.2	147481	87670.4
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	TLNPVFDQSFDFSVSLPEVQR	TLNPVFDQSFDFSVSLPEVQR	3	TLNPVFDQSFDFSVSLPEVQR3	10223.4	14003.2	4314.54
O70257	O70257	STX7_RAT	Stx7	Syntaxin-7	1	TLNQLGTPQDTPELR	TLNQLGTPQDTPELR	2	TLNQLGTPQDTPELR2	114185	102867	117160
O70257	O70257	STX7_RAT	Stx7	Syntaxin-7	1	TLNQLGTPQDTPELR	TLNQLGTPQDTPELR	3	TLNQLGTPQDTPELR3	36392.2	42239.1	54316.8
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	TLNQQLTNHIR	TLNQQLTNHIR	2	TLNQQLTNHIR2	8703.66	11920.5	10484.4
P39052	P39052	DYN2_RAT	Dnm2	Dynamin-2	1	TLNQQLTNHIR	TLNQQLTNHIR	3	TLNQQLTNHIR3	102434	143819	101857
P36953	P36953	AFAM_RAT	Afm	Afamin	1	TLNSINIAVFSK	TLNSINIAVFSK	2	TLNSINIAVFSK2	150826	158568	150966
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	TLNSLLR	TLNSLLR	2	TLNSLLR2	50570.5	46451.3	38119.3
P11661	P11661	NU5M_RAT	Mtnd5	NADH-ubiquinone oxidoreductase chain 5	1	TLNSSYK	TLNSSYK	2	TLNSSYK2		22738.1	
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	TLNTEGMVK	TLNTEGMVK	2	TLNTEGMVK2	990258	948990	1.0517e+06
A0A0G2JT44	A0A0G2JT44	A0A0G2JT44_RAT	Tmc6	Transmembrane channel-like protein	1	TLNTMYEAGTVWVR	TLNTMYEAGTVWVR	2	TLNTMYEAGTVWVR2	3849.41	3905.1	12101.6
A1KQY6	A1KQY6	A1KQY6_RAT	St8sia4	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	1	TLNVLHNR	TLNVLHNR	2	TLNVLHNR2	12331.9	6198.04	12324.4
O08770	O08770	GPV_RAT	Gp5	Platelet glycoprotein V	1	TLPAAAFR	TLPAAAFR	2	TLPAAAFR2	4.46567e+06	4.62324e+06	4.90162e+06
A0A8I6AJP4	A0A8I6AJP4	A0A8I6AJP4_RAT	Phactr4	Phosphatase and actin regulator 4	1	TLPAAPASTNTTATHPAPAK	TLPAAPASTNTTATHPAPAK	3	TLPAAPASTNTTATHPAPAK3		7721.59	9399.19
A0A0G2K0G9	A0A0G2K0G9	A0A0G2K0G9_RAT	Rin3	Ras and Rab interactor 3	1	TLPAAPPR	TLPAAPPR	2	TLPAAPPR2	35957.3	32220	20657.9
A0A8I6G9X6	A0A8I6G9X6	A0A8I6G9X6_RAT	Kntc1	Kinetochore associated 1	1	TLPACSDDFLEVLK	TLPAC(UniMod:4)SDDFLEVLK	2	TLPAC(UniMod:4)SDDFLEVLK2		10568.3	15217.8
Q498M4	Q498M4	WDR5_RAT	Wdr5	WD repeat-containing protein 5	1	TLPAHSDPVSAVHFNR	TLPAHSDPVSAVHFNR	4	TLPAHSDPVSAVHFNR4	4946.43	827.176	
D3ZTX4	D3ZTX4	D3ZTX4_RAT	Mgam	Maltase-glucoamylase	1	TLPAPLEHINLHVR	TLPAPLEHINLHVR	4	TLPAPLEHINLHVR4	8449.09	4937.85	
A0A0G2KAF4	A0A0G2KAF4	A0A0G2KAF4_RAT	Nfxl1	Nuclear transcription factor, X-box binding-like 1	1	TLPCGNHTCEQVCHVGACGECPR	TLPC(UniMod:4)GNHTC(UniMod:4)EQVC(UniMod:4)HVGAC(UniMod:4)GEC(UniMod:4)PR	4	TLPC(UniMod:4)GNHTC(UniMod:4)EQVC(UniMod:4)HVGAC(UniMod:4)GEC(UniMod:4)PR4	1714.21	7434.47	7341.41
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	TLPCLHTYCQDCLAQLDIGGQVR	TLPC(UniMod:4)LHTYC(UniMod:4)QDC(UniMod:4)LAQLDIGGQVR	3	TLPC(UniMod:4)LHTYC(UniMod:4)QDC(UniMod:4)LAQLDIGGQVR3	12998.7	5777.8	6971.76
Q923V4	Q923V4	FBX6_RAT	Fbxo6	F-box only protein 6	1	TLPEEDTSNR	TLPEEDTSNR	2	TLPEEDTSNR2	338067	360661	301565
F1MAF8	F1MAF8	F1MAF8_RAT	Atg2b	Autophagy related 2B	1	TLPEIAPSDPVQIGR	TLPEIAPSDPVQIGR	2	TLPEIAPSDPVQIGR2	10139.1	5794.62	9573.97
A0A8I5ZKS4	A0A8I5ZKS4	A0A8I5ZKS4_RAT	Hycc1	Family with sequence similarity 126, member A	1	TLPETSLPNYATNLK	TLPETSLPNYATNLK	2	TLPETSLPNYATNLK2	30671.7	31986.4	29867
A0A8I5ZKS4	A0A8I5ZKS4	A0A8I5ZKS4_RAT	Hycc1	Family with sequence similarity 126, member A	1	TLPETSLPNYATNLKDK	TLPETSLPNYATNLKDK	3	TLPETSLPNYATNLKDK3	10851.3	7063.43	6023.73
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	TLPFTLR	TLPFTLR	2	TLPFTLR2	53610.4	74641.7	77856.9
O08770	O08770	GPV_RAT	Gp5	Platelet glycoprotein V	1	TLPGDVFAALPQLTR	TLPGDVFAALPQLTR	2	TLPGDVFAALPQLTR2	3.33456e+06	3.47599e+06	3.73476e+06
O08770	O08770	GPV_RAT	Gp5	Platelet glycoprotein V	1	TLPGDVFAALPQLTR	TLPGDVFAALPQLTR	3	TLPGDVFAALPQLTR3	752082	757879	890871
G3V9M6	F1M5Q4;G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	0	TLPGGNQCIVPICR	TLPGGNQC(UniMod:4)IVPIC(UniMod:4)R	2	TLPGGNQC(UniMod:4)IVPIC(UniMod:4)R2	133743	189610	172208
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	TLPGGQPPPR	TLPGGQPPPR	2	TLPGGQPPPR2	63195.9		37989.8
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	TLPGLTGCR	TLPGLTGC(UniMod:4)R	2	TLPGLTGC(UniMod:4)R2	886136	903897	946623
D4AEP0	D4AEP0	D4AEP0_RAT	Adss	Adenylosuccinate synthetase isozyme 2	1	TLPGWNTDISNAR	TLPGWNTDISNAR	2	TLPGWNTDISNAR2	48956.7	42045.1	50692.2
Q9Z1L0	Q9Z1L0	PK3CB_RAT	Pik3cb	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform	1	TLPHFILVECCK	TLPHFILVEC(UniMod:4)C(UniMod:4)K	3	TLPHFILVEC(UniMod:4)C(UniMod:4)K3	3798.51	4169.24	4145.38
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	TLPILLK	TLPILLK	2	TLPILLK2	30803.6	49823.9	39631.5
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	TLPKPHLEAIVENLR	TLPKPHLEAIVENLR	3	TLPKPHLEAIVENLR3	4430.3		5724.15
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	TLPKPHLEAIVENLR	TLPKPHLEAIVENLR	4	TLPKPHLEAIVENLR4	5823.54	11991	10069
B3DMA2	B3DMA2	ACD11_RAT	Acad11	Acyl-CoA dehydrogenase family member 11	1	TLPMINR	TLPMINR	2	TLPMINR2	35834.2	43409.9	37908
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	TLPMQVDGEPWMQAPCTIK	TLPMQVDGEPWMQAPC(UniMod:4)TIK	3	TLPMQVDGEPWMQAPC(UniMod:4)TIK3	24074.8	16942.9	20798.9
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	TLPQLPNEEK	TLPQLPNEEK	2	TLPQLPNEEK2	143365	131948	159532
D3ZZA8	D3ZZA8	D3ZZA8_RAT	Sec24a	SEC24 homolog A, COPII coat complex component	1	TLPQMFTK	TLPQMFTK	2	TLPQMFTK2	14407	14188.8	11715.6
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	TLPSGLDDYPR	TLPSGLDDYPR	2	TLPSGLDDYPR2	141171	146865	138119
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	TLPSLESLQR	TLPSLESLQR	2	TLPSLESLQR2	145292	161638	152806
D4A0G0	D4A0G0	D4A0G0_RAT	Osbpl7	Oxysterol-binding protein	1	TLPSTDTR	TLPSTDTR	2	TLPSTDTR2	11812.1	16217.5	
Q9WUD2	Q9WUD2	TRPV2_RAT	Trpv2	Transient receptor potential cation channel subfamily V member 2	1	TLPTLSEDPSGPGITGNK	TLPTLSEDPSGPGITGNK	2	TLPTLSEDPSGPGITGNK2	37368.7	27660.8	31397.1
Q9WUD2	Q9WUD2	TRPV2_RAT	Trpv2	Transient receptor potential cation channel subfamily V member 2	1	TLPTLSEDPSGPGITGNK	TLPTLSEDPSGPGITGNK	3	TLPTLSEDPSGPGITGNK3	5270.33		9713.08
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	TLPTSGPQNLR	TLPTSGPQNLR	2	TLPTSGPQNLR2	84598.1	104482	94430.3
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	TLPVLLLYSIK	TLPVLLLYSIK	2	TLPVLLLYSIK2		7615.99	14939.2
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	TLPWGPK	TLPWGPK	2	TLPWGPK2	42694.2	28832.7	48546.2
Q642B4	Q642B4	Q642B4_RAT	Clec14a	C-type lectin domain containing 14A	1	TLPWVEEPQLSCTVR	TLPWVEEPQLSC(UniMod:4)TVR	2	TLPWVEEPQLSC(UniMod:4)TVR2	36237.2	35001.9	22486.2
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	TLQAGLLEPEVFHLNPSK	TLQAGLLEPEVFHLNPSK	3	TLQAGLLEPEVFHLNPSK3	72551.6	69909.1	87416.8
D4ADT7	D4ADT7	D4ADT7_RAT	Nod1	Nucleotide-binding oligomerization domain containing 1	1	TLQALGEVAHR	TLQALGEVAHR	2	TLQALGEVAHR2	1529.3		
D4ADT7	D4ADT7	D4ADT7_RAT	Nod1	Nucleotide-binding oligomerization domain containing 1	1	TLQALGEVAHR	TLQALGEVAHR	3	TLQALGEVAHR3	14753.4	11380.3	7176.95
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	TLQALQIPAAK	TLQALQIPAAK	2	TLQALQIPAAK2	73137	40510.9	42620.5
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	TLQALSSEK	TLQALSSEK	2	TLQALSSEK2	85282.9	83628.3	75335.3
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	TLQCWEQVLLR	TLQC(UniMod:4)WEQVLLR	2	TLQC(UniMod:4)WEQVLLR2	7162.19	3328.86	7967.11
P35053	P35053	GPC1_RAT	Gpc1	Glypican-1	1	TLQDAFPGAFGDLYTQNTR	TLQDAFPGAFGDLYTQNTR	3	TLQDAFPGAFGDLYTQNTR3	12571.9	14637.6	
G3V7P2	G3V7P2	G3V7P2_RAT	Fgl2	Fibrinogen-like 2	1	TLQEAVDSLK	TLQEAVDSLK	2	TLQEAVDSLK2	506136	279804	625113
G3V7P2	G3V7P2	G3V7P2_RAT	Fgl2	Fibrinogen-like 2	1	TLQEAVDSLKK	TLQEAVDSLKK	2	TLQEAVDSLKK2	495541	380005	387910
G3V7P2	G3V7P2	G3V7P2_RAT	Fgl2	Fibrinogen-like 2	1	TLQEAVDSLKK	TLQEAVDSLKK	3	TLQEAVDSLKK3	814504	754363	893770
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	TLQEIQEGFVFSK	TLQEIQEGFVFSK	2	TLQEIQEGFVFSK2	7068.01	12018.8	4984.56
B5DFF4	B5DFF4	B5DFF4_RAT	Vps37c	VPS37C subunit of ESCRT-I	1	TLQELEEMQNDPEAIAR	TLQELEEMQNDPEAIAR	3	TLQELEEMQNDPEAIAR3	9567.88	8506.47	3852
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TLQELKK	TLQELKK	1	TLQELKK1	2581.71	5990.05	9362.26
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TLQELKK	TLQELKK	2	TLQELKK2	399693	476998	414785
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	TLQEQLENGPNTQLAR	TLQEQLENGPNTQLAR	2	TLQEQLENGPNTQLAR2	6798.31	7264.77	1932.96
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	TLQEQLENGPNTQLAR	TLQEQLENGPNTQLAR	3	TLQEQLENGPNTQLAR3	5816	3332.22	5917.56
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	TLQEQSGAMNIR	TLQEQSGAMNIR	2	TLQEQSGAMNIR2	16379	12921.1	12972.1
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	TLQEVLTMEYR	TLQEVLTMEYR	2	TLQEVLTMEYR2	22164.8	19947.9	28246.7
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	TLQFIQQLAHDLVQQK	TLQFIQQLAHDLVQQK	3	TLQFIQQLAHDLVQQK3		19648.2	18555.6
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	TLQFSVWHHGR	TLQFSVWHHGR	2	TLQFSVWHHGR2	10972.1	6896.15	4309.45
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	TLQFSVWHHGR	TLQFSVWHHGR	3	TLQFSVWHHGR3	340499	371412	313611
Q62848	Q62848	ARFG1_RAT	Arfgap1	ADP-ribosylation factor GTPase-activating protein 1	1	TLQFTAHRPAGQPQNVTTSGDK	TLQFTAHRPAGQPQNVTTSGDK	3	TLQFTAHRPAGQPQNVTTSGDK3	12204.1	6360.23	9925.9
Q62848	Q62848	ARFG1_RAT	Arfgap1	ADP-ribosylation factor GTPase-activating protein 1	1	TLQFTAHRPAGQPQNVTTSGDK	TLQFTAHRPAGQPQNVTTSGDK	4	TLQFTAHRPAGQPQNVTTSGDK4	134543	162789	135170
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	TLQGTVSQAQER	TLQGTVSQAQER	2	TLQGTVSQAQER2	62481.5	72936.7	79948.2
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	TLQHSLPEEGVELDPHVR	TLQHSLPEEGVELDPHVR	3	TLQHSLPEEGVELDPHVR3	29384.4	30960.8	16214.2
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	TLQHSLPEEGVELDPHVR	TLQHSLPEEGVELDPHVR	4	TLQHSLPEEGVELDPHVR4	151554	155721	160286
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	TLQIFNIEMK	TLQIFNIEMK	2	TLQIFNIEMK2	867244	875263	887554
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	TLQISPLDNGDLVR	TLQISPLDNGDLVR	2	TLQISPLDNGDLVR2	57239.9	50369.5	41434.4
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	TLQLALDLVSSR	TLQLALDLVSSR	2	TLQLALDLVSSR2	88142.5	114667	88655.3
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	TLQLALDLVSSR	TLQLALDLVSSR	3	TLQLALDLVSSR3	13885.9	20678.4	9604.52
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	TLQLAVATHQEPPDAK	TLQLAVATHQEPPDAK	2	TLQLAVATHQEPPDAK2	9382.35	3162.14	7121.6
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	TLQLAVATHQEPPDAK	TLQLAVATHQEPPDAK	3	TLQLAVATHQEPPDAK3	92436.7	86133.9	77840.4
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	TLQNIATLLK	TLQNIATLLK	2	TLQNIATLLK2	26376.5	37006.1	30086.4
B0BNM9	B0BNM9	GLTP_RAT	GLTP	Glycolipid transfer protein	1	TLQNILEVEK	TLQNILEVEK	2	TLQNILEVEK2	8150.22	5988.01	6634.64
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	TLQNQLVELK	TLQNQLVELK	2	TLQNQLVELK2	69970.2	67811.5	69543.1
A0A0G2JWT6	A0A0G2JWT6	A0A0G2JWT6_RAT	Pex16	Peroxisomal membrane protein PEX16	1	TLQNSPSLHSR	TLQNSPSLHSR	3	TLQNSPSLHSR3	2826.08	2629.13	2729.71
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	TLQPELETLQK	TLQPELETLQK	2	TLQPELETLQK2	10659.3	6490.45	9121.7
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	TLQPNSLLEEEHVR	TLQPNSLLEEEHVR	2	TLQPNSLLEEEHVR2	3558.57		
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	TLQPNSLLEEEHVR	TLQPNSLLEEEHVR	3	TLQPNSLLEEEHVR3	32256.9	34190.8	41212.1
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	TLQQEREELNK	TLQQEREELNK	3	TLQQEREELNK3	38550.7	37756.9	36519.6
Q4KMA2	Q4KMA2;F7FJT3	RD23B_RAT	Rad23b	UV excision repair protein RAD23 homolog B	0	TLQQQTFK	TLQQQTFK	2	TLQQQTFK2	39796.8	38375.7	45286.6
F7FNG5	D3ZK73;F7FNG5	F7FNG5_RAT	Cul4a	Cullin 4A	0	TLQSLACGK	TLQSLAC(UniMod:4)GK	2	TLQSLAC(UniMod:4)GK2	13211.2	16702.7	8510.82
F1M8B7	F1M8B7	F1M8B7_RAT	Chmp2b	Charged multivesicular body protein 2B	1	TLQTMQNFQK	TLQTMQNFQK	2	TLQTMQNFQK2	19695.4	10615.5	
D3ZKU7	D3ZKU7	BL1S1_RAT	Bloc1s1	Biogenesis of lysosome-related organelles complex 1 subunit 1	1	TLQVQAAQFAK	TLQVQAAQFAK	2	TLQVQAAQFAK2	25275.8	32954	29228.5
Q4QR80	Q4QR80	RT25_RAT	Mrps25	Small ribosomal subunit protein mS25	1	TLQYLGSGDVVFK	TLQYLGSGDVVFK	2	TLQYLGSGDVVFK2	3860.27	3397.4	4464.91
D4A3A9	D4A3A9	D4A3A9_RAT	Galnt15	Polypeptide N-acetylgalactosaminyltransferase	1	TLQYSASK	TLQYSASK	2	TLQYSASK2	8275.46	3901.39	
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	TLRECCDTQDSVSCFSTQSPLMK	TLREC(UniMod:4)C(UniMod:4)DTQDSVSC(UniMod:4)FSTQSPLMK	3	TLREC(UniMod:4)C(UniMod:4)DTQDSVSC(UniMod:4)FSTQSPLMK3	15276.8	20257.1	15184.3
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TLREQGVEEHETLLLR	TLREQGVEEHETLLLR	3	TLREQGVEEHETLLLR3	9816.44	15311.3	20213
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TLREQGVEEHETLLLR	TLREQGVEEHETLLLR	4	TLREQGVEEHETLLLR4	68830.2	85302.7	99636.7
P97576	P97576	GRPE1_RAT	Grpel1	GrpE protein homolog 1, mitochondrial	1	TLRPALVGVVK	TLRPALVGVVK	3	TLRPALVGVVK3	14838.3	22030.3	13896.6
A1L1J9	A1L1J9	LMF2_RAT	Lmf2	Lipase maturation factor 2	1	TLRPQGK	TLRPQGK	2	TLRPQGK2			14814.9
A0A0G2JSI4	A0A0G2JSI4	A0A0G2JSI4_RAT	Adgre5	Adhesion G protein-coupled receptor E5	1	TLRPSESGM	TLRPSESGM	2	TLRPSESGM2	11848.9	14996.4	9207.33
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	TLSAHSVPNISGAACSAFSSPFGCPYSHR	TLSAHSVPNISGAAC(UniMod:4)SAFSSPFGC(UniMod:4)PYSHR	4	TLSAHSVPNISGAAC(UniMod:4)SAFSSPFGC(UniMod:4)PYSHR4	1690.82	5707.71	
D3ZCK4	D3ZCK4	D3ZCK4_RAT	Def6	DEF6 guanine nucleotide exchange factor	1	TLSANSSEQK	TLSANSSEQK	2	TLSANSSEQK2			23311.4
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	TLSCVDR	TLSC(UniMod:4)VDR	2	TLSC(UniMod:4)VDR2	65318.7	27039.2	21193.6
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	TLSCVDRLEVGEVR	TLSC(UniMod:4)VDRLEVGEVR	3	TLSC(UniMod:4)VDRLEVGEVR3	19960.5	45583.4	49191.1
A0A0G2JXI6	A0A0G2JXI6	A0A0G2JXI6_RAT	Cyrib	CYFIP related Rac1 interactor B	1	TLSDATTK	TLSDATTK	2	TLSDATTK2	86428.3	32784.3	
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	TLSDIAFK	TLSDIAFK	2	TLSDIAFK2	42195.6	31610	36557.3
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	TLSDPPSPLPHGPPNK	TLSDPPSPLPHGPPNK	3	TLSDPPSPLPHGPPNK3	42330.7	48002.5	31384.4
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	TLSDVEDQK	TLSDVEDQK	2	TLSDVEDQK2	49620.7	44736.8	45791.4
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	TLSDVEDQKELASPVSPELR	TLSDVEDQKELASPVSPELR	3	TLSDVEDQKELASPVSPELR3	20806.3	20025.7	23169.3
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	TLSDVPSAAPQNLSLEVR	TLSDVPSAAPQNLSLEVR	2	TLSDVPSAAPQNLSLEVR2	18627.1	19218.5	22562.9
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	TLSDVPSAAPQNLSLEVR	TLSDVPSAAPQNLSLEVR	3	TLSDVPSAAPQNLSLEVR3	8904.86	6115.73	5354.26
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	TLSDVQK	TLSDVQK	1	TLSDVQK1	31259.9		27633.7
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	TLSDVQK	TLSDVQK	2	TLSDVQK2	141026	879385	
P62986	A0A8I6AN99;P62986;P0CG51;Q63429;A0A8I6A1Y5;A0A8I6G8I7;F1M927;P62982;A0A8I6A5Y3	RL40_RAT	Uba52	Ubiquitin-ribosomal protein eL40 fusion protein	0	TLSDYNIQK	TLSDYNIQK	2	TLSDYNIQK2	1.44126e+06	1.63617e+06	1.65045e+06
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	TLSEVDYSPGPGR	TLSEVDYSPGPGR	2	TLSEVDYSPGPGR2	15898.3	23373.1	15092.6
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	TLSFEENGVGSNFK	TLSFEENGVGSNFK	2	TLSFEENGVGSNFK2	15435.8	13596.1	22115.3
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	TLSFGSDLNYATR	TLSFGSDLNYATR	2	TLSFGSDLNYATR2	120716	83966.3	107068
Q66H43	Q66H43	BORC6_RAT	Borcs6	BLOC-1-related complex subunit 6	1	TLSGEEEAESVGVASR	TLSGEEEAESVGVASR	2	TLSGEEEAESVGVASR2	4047.25	5586.19	3305.71
Q63663	Q63663	GBP2_RAT	Gbp2	Guanylate-binding protein 2	1	TLSGGIIVNGPR	TLSGGIIVNGPR	2	TLSGGIIVNGPR2	16990.6	6154.61	16217.3
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	TLSGMESYCVR	TLSGMESYC(UniMod:4)VR	2	TLSGMESYC(UniMod:4)VR2	138505	174016	179674
Q5BJY6	Q5BJY6	NAGA_RAT	Amdhd2	N-acetylglucosamine-6-phosphate deacetylase	1	TLSGSIAPMDVCIR	TLSGSIAPMDVC(UniMod:4)IR	2	TLSGSIAPMDVC(UniMod:4)IR2		10622.7	2824.8
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TLSHPQQMALLDQTK	TLSHPQQMALLDQTK	2	TLSHPQQMALLDQTK2	268340	238080	208528
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TLSHPQQMALLDQTK	TLSHPQQMALLDQTK	3	TLSHPQQMALLDQTK3	2.62469e+06	2.70199e+06	2.83096e+06
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	TLSIDSIQFQR	TLSIDSIQFQR	2	TLSIDSIQFQR2	23674.3	29206.5	18404.7
F1M9D0	F1M9D0	F1M9D0_RAT	Map3k2	Mitogen activated protein kinase kinase kinase 2	1	TLSIFMEYMPGGSIK	TLSIFMEYMPGGSIK	2	TLSIFMEYMPGGSIK2	7784.74	4772.9	2550.07
A0A8I5ZVX1	A0A8I5ZVX1	A0A8I5ZVX1_RAT	Ppfibp2	PPFIA binding protein 2	1	TLSINEDEIEGSFR	TLSINEDEIEGSFR	2	TLSINEDEIEGSFR2	4291.13	4925.06	
A0A0G2JVT8	A0A8I6ARY9;A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	0	TLSINEQPK	TLSINEQPK	2	TLSINEQPK2	11608.8	18594.9	15960.6
P18292	P18292	THRB_RAT	F2	Prothrombin	1	TLSKYQNFDPEVK	TLSKYQNFDPEVK	2	TLSKYQNFDPEVK2	7657.62	14431.5	13076.4
P18292	P18292	THRB_RAT	F2	Prothrombin	1	TLSKYQNFDPEVK	TLSKYQNFDPEVK	3	TLSKYQNFDPEVK3	75981	112987	77278.1
A0A8I5ZYB9	A0A8I5ZYB9	A0A8I5ZYB9_RAT	Lrrc32	Leucine rich repeat containing 32	1	TLSLAENSLTR	TLSLAENSLTR	2	TLSLAENSLTR2	315443	282368	331172
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	TLSLDEVYLIDSGAQYK	TLSLDEVYLIDSGAQYK	2	TLSLDEVYLIDSGAQYK2	25496.4	23558.3	17408.3
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	TLSLDEVYLIDSGAQYK	TLSLDEVYLIDSGAQYK	3	TLSLDEVYLIDSGAQYK3	15197.5	10974.2	17861.4
A0A8J8Y8J8	A0A8J8Y8J8	A0A8J8Y8J8_RAT	Ostm1	Osteoclastogenesis associated transmembrane protein 1	1	TLSLLYSEMQK	TLSLLYSEMQK	2	TLSLLYSEMQK2	3764.17	10040.1	10677.6
D3ZE20	D3ZE20	D3ZE20_RAT	Nfatc1	Nuclear factor of activated T-cells 1	1	TLSLQVASNPIECSQR	TLSLQVASNPIEC(UniMod:4)SQR	2	TLSLQVASNPIEC(UniMod:4)SQR2	6550.02	9286.84	7420.55
Q5FVI3	Q5FVI3	LRC57_RAT	Lrrc57	Leucine-rich repeat-containing protein 57	1	TLSLSGNQLGALPPQLCSLR	TLSLSGNQLGALPPQLC(UniMod:4)SLR	3	TLSLSGNQLGALPPQLC(UniMod:4)SLR3	11850.6	9437.11	
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	TLSMTLK	TLSMTLK	2	TLSMTLK2	19334	27505.9	19509.2
B0BN65	B0BN65	B0BN65_RAT	Cyria	CYFIP related Rac1 interactor A	1	TLSNATMHFVSENK	TLSNATMHFVSENK	2	TLSNATMHFVSENK2	2979.92		4526.29
B0BN65	B0BN65	B0BN65_RAT	Cyria	CYFIP related Rac1 interactor A	1	TLSNATMHFVSENK	TLSNATMHFVSENK	3	TLSNATMHFVSENK3	41400.7	54621.5	35355.7
P86182	P86182	CCD22_RAT	Ccdc22	Coiled-coil domain-containing protein 22	1	TLSNLEK	TLSNLEK	2	TLSNLEK2	25485.5	22016.1	29125.3
A0A0G2JYR1	A0A0G2JYR1	A0A0G2JYR1_RAT	Exoc6b	Exocyst complex component	1	TLSNSLQNVIK	TLSNSLQNVIK	2	TLSNSLQNVIK2	1504.53	728.068	1968.68
Q3ZU82	Q3ZU82	GOGA5_RAT	Golga5	Golgin subfamily A member 5	1	TLSNSSQSELESR	TLSNSSQSELESR	2	TLSNSSQSELESR2	11527.7	11044.1	5078.64
Q497B0	Q497B0	NIT2_RAT	Nit2	Omega-amidase NIT2	1	TLSPGDSFSTFDTPYCR	TLSPGDSFSTFDTPYC(UniMod:4)R	2	TLSPGDSFSTFDTPYC(UniMod:4)R2	27906.7	34439.8	37980.6
A0A8I5Y6A1	A0A8I5Y6A1	A0A8I5Y6A1_RAT	Ablim1	Actin-binding LIM protein 1	1	TLSPTPSAEGFQDGR	TLSPTPSAEGFQDGR	2	TLSPTPSAEGFQDGR2	15170.1	4361.41	5187.03
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	TLSPVLESPR	TLSPVLESPR	2	TLSPVLESPR2	465385	518265	496651
D3ZDZ1	D3ZDZ1	D3ZDZ1_RAT	Apbb1ip	Amyloid beta precursor protein binding family B member 1 interacting protein	1	TLSQWVMGIR	TLSQWVMGIR	2	TLSQWVMGIR2	7799.72	8102.07	10965.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TLSSEVLIPGFDVNFGTILR	TLSSEVLIPGFDVNFGTILR	3	TLSSEVLIPGFDVNFGTILR3	38118.8	54215.3	56406
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	TLSSQYVPAK	TLSSQYVPAK	2	TLSSQYVPAK2	93910.7	110826	108269
D3ZY50	D3ZY50	D3ZY50_RAT	Atpaf1	ATP synthase mitochondrial F1 complex assembly factor 1	1	TLSSVFNVEMVK	TLSSVFNVEMVK	2	TLSSVFNVEMVK2	7872.21	10455.8	5686.57
D4A748	D4A748	D4A748_RAT	Wdfy4	WDFY family member 4	1	TLSTGGSALHSVLIR	TLSTGGSALHSVLIR	3	TLSTGGSALHSVLIR3		10272.4	
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	TLSTSDDVEDRENEK	TLSTSDDVEDRENEK	2	TLSTSDDVEDRENEK2	1654.54		
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	TLSTSDDVEDRENEK	TLSTSDDVEDRENEK	3	TLSTSDDVEDRENEK3	93831.5	85787.6	59047.3
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	TLSTVSTQQK	TLSTVSTQQK	2	TLSTVSTQQK2	122924	130911	133295
B2RZ17	B2RZ17	FBXW2_RAT	Fbxw2	F-box/WD repeat-containing protein 2	1	TLSVSEDR	TLSVSEDR	2	TLSVSEDR2	15446.1	12803.3	18365.6
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	TLTAEAENWADNEPNNK	TLTAEAENWADNEPNNK	2	TLTAEAENWADNEPNNK2	314151	285417	289607
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	TLTAEAENWADNEPNNK	TLTAEAENWADNEPNNK	3	TLTAEAENWADNEPNNK3	135306	149870	186703
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	TLTAEAENWADNEPNNKR	TLTAEAENWADNEPNNKR	3	TLTAEAENWADNEPNNKR3	154243	165942	146842
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	TLTASQVDQR	TLTASQVDQR	2	TLTASQVDQR2	29372	28342.8	21199
P62083	P62083;A0A8I6GEL5	RS7_RAT	Rps7	Small ribosomal subunit protein eS7	0	TLTAVHDAILEDLVFPSEIVGK	TLTAVHDAILEDLVFPSEIVGK	3	TLTAVHDAILEDLVFPSEIVGK3	32935.9	45286.9	24248.4
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	TLTDEEAK	TLTDEEAK	2	TLTDEEAK2		98477	
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	TLTDEELADWK	TLTDEELADWK	2	TLTDEELADWK2	29889.5	35491.1	21274.8
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	TLTDEELADWKR	TLTDEELADWKR	3	TLTDEELADWKR3	3838.88		2714.45
A0A8I6AEY8	A0A8I6AEY8	A0A8I6AEY8_RAT	Vps8	VPS8 subunit of CORVET complex	1	TLTDEQVVMGNK	TLTDEQVVMGNK	2	TLTDEQVVMGNK2	3413.89	3805.95	
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	TLTEDEIATILK	TLTEDEIATILK	2	TLTEDEIATILK2	121039	157206	177661
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	TLTEDEIATILK	TLTEDEIATILK	3	TLTEDEIATILK3	5510.31	5599.45	5403.45
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	TLTEDEIATILQSTLK	TLTEDEIATILQSTLK	2	TLTEDEIATILQSTLK2	15433.1	18296.2	15286.7
A0A8I6A0F8	A0A8I6A0F8	A0A8I6A0F8_RAT	Stk4	non-specific serine/threonine protein kinase	1	TLTEDEIATILQSTLK	TLTEDEIATILQSTLK	3	TLTEDEIATILQSTLK3	23380.8	23214.3	32592.4
O70377	O70377	SNP23_RAT	Snap23	Synaptosomal-associated protein 23	1	TLTELNK	TLTELNK	2	TLTELNK2	105134	94935.7	186567
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	TLTGALNAHNK	TLTGALNAHNK	2	TLTGALNAHNK2	2393.82		
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	TLTGALNAHNK	TLTGALNAHNK	3	TLTGALNAHNK3	27615.5	32968.5	19983.5
Q4V7C7	Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	1	TLTGTVIDSGDGVTHVIPVAEGYVIGSCIK	TLTGTVIDSGDGVTHVIPVAEGYVIGSC(UniMod:4)IK	4	TLTGTVIDSGDGVTHVIPVAEGYVIGSC(UniMod:4)IK4	116415	98826.5	137830
A0A8I6AZI9	A0A8I6AZI9	A0A8I6AZI9_RAT	Ubash3a	Ubiquitin associated and SH3 domain containing, A	1	TLTHGANSVFNWR	TLTHGANSVFNWR	3	TLTHGANSVFNWR3	19372.1	6885.2	17927.1
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	TLTIVDTGIGMTK	TLTIVDTGIGMTK	2	TLTIVDTGIGMTK2	1.47014e+06	1.73628e+06	1.64429e+06
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	TLTIVDTGIGMTK	TLTIVDTGIGMTK	3	TLTIVDTGIGMTK3			105000
Q9QYJ2	Q63713;Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	0	TLTLISK	TLTLISK	1	TLTLISK1	10752.4	9640.36	10231.8
Q9QYJ2	Q63713;Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	0	TLTLISK	TLTLISK	2	TLTLISK2	830613	885239	831586
P16573	P16573	CEAM1_RAT	Ceacam1	Carcinoembryonic antigen-related cell adhesion molecule 1	1	TLTLLNVR	TLTLLNVR	2	TLTLLNVR2	468264	424543	441771
G3V8G2	G3V8G2	G3V8G2_RAT	Psmd5	26S proteasome non-ATPase regulatory subunit 5	1	TLTLSQIGR	TLTLSQIGR	2	TLTLSQIGR2	93136	71497.6	69459
P34058	P34058;A0A8I5ZYT7	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	TLTLVDTGIGMTK	TLTLVDTGIGMTK	3	TLTLVDTGIGMTK3	69644.4	73059.2	66397.9
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	TLTMTPTEQKPGAK	TLTMTPTEQKPGAK	2	TLTMTPTEQKPGAK2	11042.1	7973.93	7139.8
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	TLTMTPTEQKPGAK	TLTMTPTEQKPGAK	3	TLTMTPTEQKPGAK3	104120	87539.7	77378.3
A0A8I6AEV8;D4A9P7	A0A8I6B1N2;A0A8I6AEV8;D4A9P7	A0A8I6AEV8_RAT;D4A9P7_RAT	Bola2;Bola2-ps1	BolA family member 2, pseudogene 1	0	TLTPEQWTR	TLTPEQWTR	2	TLTPEQWTR2	86044.6	83271	96709
Q9JID1	Q9JID1	PDCD4_RAT	Pdcd4	Programmed cell death protein 4	1	TLTPIIQEYFEHGDTNEVAEMLR	TLTPIIQEYFEHGDTNEVAEMLR	3	TLTPIIQEYFEHGDTNEVAEMLR3	7955.83	12315.7	11108
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	TLTPLTLR	TLTPLTLR	2	TLTPLTLR2	7946.18	15784.4	7720.24
Q5EB77	A0A8I5ZQR4;Q5EB77	RAB18_RAT	Rab18	Ras-related protein Rab-18	0	TLTPSYYR	TLTPSYYR	2	TLTPSYYR2	254835	253685	261630
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	TLTPTPDGK	TLTPTPDGK	2	TLTPTPDGK2	78503.9	75133.2	90404.4
A0A8I5ZYD8	A0A8I5ZYD8	A0A8I5ZYD8_RAT	Fhl3	Four and a half LIM domains 3	1	TLTQGGVTYR	TLTQGGVTYR	2	TLTQGGVTYR2	156391	134892	150769
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	TLTSDVANLANEK	TLTSDVANLANEK	2	TLTSDVANLANEK2	18994.2	23403.7	21335
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	TLTSDVANLANEKEELNNK	TLTSDVANLANEKEELNNK	3	TLTSDVANLANEKEELNNK3	199943	239806	190970
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	TLTSIVHLER	TLTSIVHLER	2	TLTSIVHLER2	2891.48	4292.85	3013.45
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	TLTSIVHLER	TLTSIVHLER	3	TLTSIVHLER3	44384.1	45201.3	30352
Q4V885	Q4V885	COL12_RAT	Colec12	Collectin-12	1	TLTSNLNDVR	TLTSNLNDVR	2	TLTSNLNDVR2	44149	47002	40999.6
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	TLTTLLEK	TLTTLLEK	2	TLTTLLEK2	40642.9	46857.2	39750.7
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	TLTVEGCEYK	TLTVEGC(UniMod:4)EYK	2	TLTVEGC(UniMod:4)EYK2	7968.32	4549.24	7824.45
Q5XID0	Q5XID0	YIPF5_RAT	Yipf5	Protein YIPF5	1	TLTVLHPLR	TLTVLHPLR	2	TLTVLHPLR2	9502.66	4147.18	9783.24
Q62902	Q62902	LMAN1_RAT	Lman1	Protein ERGIC-53	1	TLTVMINNGFTPDK	TLTVMINNGFTPDK	2	TLTVMINNGFTPDK2	18568.3	21920.5	25102.4
Q62902	Q62902	LMAN1_RAT	Lman1	Protein ERGIC-53	1	TLTVMINNGFTPDKNDYEFCAK	TLTVMINNGFTPDKNDYEFC(UniMod:4)AK	3	TLTVMINNGFTPDKNDYEFC(UniMod:4)AK3	7475.43	9712.58	7881.98
Q5EB73	Q5EB73	PGAP4_RAT	Pgap4	Post-GPI attachment to proteins factor 4	1	TLTYLSQVYCHK	TLTYLSQVYC(UniMod:4)HK	3	TLTYLSQVYC(UniMod:4)HK3	4285.6	4796.59	4427.51
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	TLVDEVQELEAK	TLVDEVQELEAK	2	TLVDEVQELEAK2	223972	233827	229505
G3V8D0	G3V8D0	G3V8D0_RAT	St8sia3	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	1	TLVDFFVEHR	TLVDFFVEHR	3	TLVDFFVEHR3	2167.97	2323.97	1078.06
Q4G063	Q4G063	CREL2_RAT	Creld2	Protein disulfide isomerase Creld2	1	TLVDKFNQGMANTAR	TLVDKFNQGMANTAR	2	TLVDKFNQGMANTAR2	94288.6	92248.3	96573.4
Q4G063	Q4G063	CREL2_RAT	Creld2	Protein disulfide isomerase Creld2	1	TLVDKFNQGMANTAR	TLVDKFNQGMANTAR	3	TLVDKFNQGMANTAR3	99183.1	100744	101906
Q7TQ20	Q7TQ20	DNJC2_RAT	Dnajc2	DnaJ homolog subfamily C member 2	1	TLVDNAYSCDPR	TLVDNAYSC(UniMod:4)DPR	2	TLVDNAYSC(UniMod:4)DPR2	1673.08	3404.38	1436.06
Q9EQN5	Q9EQN5	SMBP2_RAT	Ighmbp2	DNA-binding protein SMUBP-2	1	TLVDYFTEHGEVR	TLVDYFTEHGEVR	3	TLVDYFTEHGEVR3	6553.44		5025.85
D3ZU48	D3ZU48	D3ZU48_RAT	Klhdc4	Kelch domain containing 4	1	TLVEMDPK	TLVEMDPK	2	TLVEMDPK2	34283.6	29154	33121.8
Q6AXN3	Q6AXN3	TMED5_RAT	Tmed5	Transmembrane emp24 domain-containing protein 5	1	TLVFEQR	TLVFEQR	2	TLVFEQR2	88465.9	70362.2	99123.4
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	TLVGICSEHQSR	TLVGIC(UniMod:4)SEHQSR	3	TLVGIC(UniMod:4)SEHQSR3	20256.7	46939.6	26862.5
Q71F54	Q71F54	SH3R1_RAT	Sh3rf1	E3 ubiquitin-protein ligase SH3RF1	1	TLVGSGVDELPSNILLVR	TLVGSGVDELPSNILLVR	2	TLVGSGVDELPSNILLVR2		1076.78	
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	TLVHTVSVAVIDGTR	TLVHTVSVAVIDGTR	2	TLVHTVSVAVIDGTR2	4977.77	3929.25	
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	TLVHTVSVAVIDGTR	TLVHTVSVAVIDGTR	3	TLVHTVSVAVIDGTR3	63082.3	53072.3	49075
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	TLVHVNR	TLVHVNR	2	TLVHVNR2	17168	10268.9	13124.2
B5DF93	B5DF93	PATL1_RAT	Patl1	Protein PAT1 homolog 1	1	TLVIIEK	TLVIIEK	2	TLVIIEK2	25888.7	26728	27363.5
A0A0G2JVT8	A0A8I6ARY9;A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	0	TLVIILNCMR	TLVIILNC(UniMod:4)MR	2	TLVIILNC(UniMod:4)MR2		5245.97	6729.92
O35796	O35796	C1QBP_RAT	C1qbp	Complement component 1 Q subcomponent-binding protein, mitochondrial	1	TLVLDCHYPEDEIGHEDEAESDIFSIK	TLVLDC(UniMod:4)HYPEDEIGHEDEAESDIFSIK	4	TLVLDC(UniMod:4)HYPEDEIGHEDEAESDIFSIK4	43368.4	35763.9	43859.8
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	TLVLEGLEK	TLVLEGLEK	2	TLVLEGLEK2	17206.4	13209.1	24656.8
Q641Y0	Q641Y0	OST48_RAT	Ddost	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit	1	TLVLLDNLNVR	TLVLLDNLNVR	2	TLVLLDNLNVR2	113337	100492	100331
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	TLVLLLGVDPSR	TLVLLLGVDPSR	2	TLVLLLGVDPSR2	19056.8	5846.97	15014.8
P62963	P62963	PROF1_RAT	Pfn1	Profilin-1	1	TLVLLMGK	TLVLLMGK	1	TLVLLMGK1	19101.2		13856.9
P62963	P62963	PROF1_RAT	Pfn1	Profilin-1	1	TLVLLMGK	TLVLLMGK	2	TLVLLMGK2	3.92698e+06	3.96514e+06	4.153e+06
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	TLVLSCVSPDNANSPEVPVK	TLVLSC(UniMod:4)VSPDNANSPEVPVK	3	TLVLSC(UniMod:4)VSPDNANSPEVPVK3	34384.2	25721.7	33087.8
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	TLVPATEAIK	TLVPATEAIK	2	TLVPATEAIK2	1.44978e+06	1.55557e+06	1.48949e+06
D3ZKG1	D3ZKG1	D3ZKG1_RAT	Mmut	Methylmalonyl-CoA mutase, mitochondrial	1	TLVPELIK	TLVPELIK	2	TLVPELIK2	13413.3		16270.6
Q3B7U9	Q3B7U9	FKBP8_RAT	Fkbp8	Peptidyl-prolyl cis-trans isomerase FKBP8	1	TLVPGPTGSSRPLK	TLVPGPTGSSRPLK	3	TLVPGPTGSSRPLK3	49914.7	30522.3	56217.8
P51111	P51111	HD_RAT	Htt	Huntingtin	1	TLVPMVEQLFSHLLK	TLVPMVEQLFSHLLK	3	TLVPMVEQLFSHLLK3	32395.2		
Q5U2U0	Q5U2U0	CLPX_RAT	Clpx	ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial	1	TLVQILTEPR	TLVQILTEPR	2	TLVQILTEPR2	7730.62	3216.66	
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	TLVQQLK	TLVQQLK	2	TLVQQLK2	477743	515379	518209
A0A0G2K059	A0A0G2K059	A0A0G2K059_RAT	Mcu	Calcium uniporter protein	1	TLVQQLYTTLCIEQHQLNK	TLVQQLYTTLC(UniMod:4)IEQHQLNK	3	TLVQQLYTTLC(UniMod:4)IEQHQLNK3	127032	132886	186389
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	TLVSAVPEESEMDPHVR	TLVSAVPEESEMDPHVR	3	TLVSAVPEESEMDPHVR3	98837.8	91731	68651.1
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	TLVSTVGSMVFSEGEAQR	TLVSTVGSMVFSEGEAQR	2	TLVSTVGSMVFSEGEAQR2	25173.8	28669.6	24862.4
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	TLVSTVGSMVFSEGEAQR	TLVSTVGSMVFSEGEAQR	3	TLVSTVGSMVFSEGEAQR3	60141.3	56044.7	63632.3
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	TLVSVTK	TLVSVTK	1	TLVSVTK1	14171.1	18878.6	8183.69
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	TLVTLEQSR	TLVTLEQSR	2	TLVTLEQSR2	87787.6	143324	92918.9
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	TLVTQNSGVEALIHAILR	TLVTQNSGVEALIHAILR	3	TLVTQNSGVEALIHAILR3	7532.84	12815.6	6325.02
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	TLVTSCR	TLVTSC(UniMod:4)R	2	TLVTSC(UniMod:4)R2	28164.9	29063.5	31869.9
D3ZE05	D3ZE05	D3ZE05_RAT	Cilp2	Cartilage intermediate layer protein 2	1	TLVTVTPQGSCR	TLVTVTPQGSC(UniMod:4)R	2	TLVTVTPQGSC(UniMod:4)R2	65840.7	63420.4	64119.3
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	TLWAHCWCPLLQGIACLCCDAR	TLWAHC(UniMod:4)WC(UniMod:4)PLLQGIAC(UniMod:4)LC(UniMod:4)C(UniMod:4)DAR	3	TLWAHC(UniMod:4)WC(UniMod:4)PLLQGIAC(UniMod:4)LC(UniMod:4)C(UniMod:4)DAR3	7015.34	12505	
A0A8I5ZYW3	A0A8I5ZYW3	A0A8I5ZYW3_RAT	Lsp1	Lymphocyte-specific protein 1	1	TLWETGEVQTQSASK	TLWETGEVQTQSASK	2	TLWETGEVQTQSASK2	21317.1	22235.7	21760.8
D4A2G6	D4A2G6	D4A2G6_RAT	Thbs2	Thrombospondin 2	1	TLWHDPK	TLWHDPK	2	TLWHDPK2	16134.6	13726.8	6380.31
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	TLWHDPR	TLWHDPR	2	TLWHDPR2	7.69535e+06	7.67325e+06	8.62734e+06
P29315	P29315	RINI_RAT	Rnh1	Ribonuclease inhibitor	1	TLWLWDCDVTAEGCK	TLWLWDC(UniMod:4)DVTAEGC(UniMod:4)K	2	TLWLWDC(UniMod:4)DVTAEGC(UniMod:4)K2	37167.8	23505.3	58231.9
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	TLWNGQK	TLWNGQK	1	TLWNGQK1	11964.4	7342.17	13271.4
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	TLWNGQK	TLWNGQK	2	TLWNGQK2	1.34866e+06	1.23564e+06	1.34039e+06
Q9JID2	Q9JID2	GNA11_RAT	Gna11	Guanine nucleotide-binding protein subunit alpha-11	1	TLWSDPGVQECYDR	TLWSDPGVQEC(UniMod:4)YDR	2	TLWSDPGVQEC(UniMod:4)YDR2	4791.92	5185.8	
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	TLWSLVAFPK	TLWSLVAFPK	2	TLWSLVAFPK2	20238.1	19143.6	22589.1
A0A8I5ZS02	A0A8I5ZS02	A0A8I5ZS02_RAT	Ptges3l	Prostaglandin E synthase 3 like	1	TLWYDRPK	TLWYDRPK	2	TLWYDRPK2	54211.8	71784.8	34478.3
Q5U2U2	Q5U2U2	CRKL_RAT	Crkl	Crk-like protein	1	TLYDFPGNDAEDLPFKK	TLYDFPGNDAEDLPFKK	3	TLYDFPGNDAEDLPFKK3	48154.2	39223.9	38569.4
D3ZDZ1	D3ZDZ1	D3ZDZ1_RAT	Apbb1ip	Amyloid beta precursor protein binding family B member 1 interacting protein	1	TLYDNYQR	TLYDNYQR	2	TLYDNYQR2	10524.9	9226.55	13037.7
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	TLYEVFQR	TLYEVFQR	2	TLYEVFQR2	86218.6	95182.1	93146.9
A0A8I5Y153	A0A8I5Y153	A0A8I5Y153_RAT	Llgl2	LLGL scribble cell polarity complex component 2	1	TLYFADTYLR	TLYFADTYLR	2	TLYFADTYLR2	5710.93	7071.91	8270.45
P62804	P62804	H4_RAT	H4c16	Histone H4	1	TLYGFGG	TLYGFGG	1	TLYGFGG1	21470.9	19173.5	9460.01
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	TLYIQGER	TLYIQGER	2	TLYIQGER2	75350.7	84525.3	81084
P70645	P70645	BLMH_RAT	Blmh	Bleomycin hydrolase	1	TLYNNQPIDFLK	TLYNNQPIDFLK	2	TLYNNQPIDFLK2	24081.7	20805	21975.8
P70645	P70645	BLMH_RAT	Blmh	Bleomycin hydrolase	1	TLYNNQPIDFLKK	TLYNNQPIDFLKK	3	TLYNNQPIDFLKK3	18734.1	36081.7	42621.5
B5DEH4	B5DEH4	B5DEH4_RAT	Uap1l1	UDP-N-acetylglucosamine pyrophosphorylase 1 like 1	1	TLYQLQAER	TLYQLQAER	2	TLYQLQAER2	10859	9515.32	8691.54
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	TLYTQIR	TLYTQIR	2	TLYTQIR2	138326	194294	164809
Q6AYC2	Q6AYC2	IRGM_RAT	Irgm	Immunity-related GTPase family M protein	1	TLYVIYEK	TLYVIYEK	2	TLYVIYEK2	23832.7	25495.2	24409.7
D3ZMI6	D3ZMI6	D3ZMI6_RAT	Olfm4	Olfactomedin 4	1	TLYWVAPLNTDAR	TLYWVAPLNTDAR	2	TLYWVAPLNTDAR2	150769	158480	233919
D3ZMI6	D3ZMI6	D3ZMI6_RAT	Olfm4	Olfactomedin 4	1	TLYWVAPLNTDAR	TLYWVAPLNTDAR	3	TLYWVAPLNTDAR3	4610.71	12449.7	12726.2
P09456	P09456	KAP0_RAT	Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit	1	TMAALAK	TMAALAK	1	TMAALAK1	5502.48	1792.71	2720.24
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	TMADGNEK	TMADGNEK	1	TMADGNEK1			66673.3
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	TMADGNEK	TMADGNEK	2	TMADGNEK2			308997
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	TMAFLEEELVVTACGLYTYGK	TMAFLEEELVVTAC(UniMod:4)GLYTYGK	3	TMAFLEEELVVTAC(UniMod:4)GLYTYGK3	56543.3	38372	40115.9
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	TMAFLEEELVVTACGLYTYGKPVPGLVTMK	TMAFLEEELVVTAC(UniMod:4)GLYTYGKPVPGLVTMK	4	TMAFLEEELVVTAC(UniMod:4)GLYTYGKPVPGLVTMK4	108050	128964	121243
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	TMAGFINYK	TMAGFINYK	2	TMAGFINYK2	47212.9	53409.3	53303.9
Q5FVH7	Q5FVH7	MEA1_RAT	Mea1	Male-enhanced antigen 1	1	TMAGVSLPAPGVPAWAR	TMAGVSLPAPGVPAWAR	2	TMAGVSLPAPGVPAWAR2	18754.9	20365.8	21240.8
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TMAITPR	TMAITPR	2	TMAITPR2	596487	711261	611370
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	TMALPVGR	TMALPVGR	2	TMALPVGR2	35867.3	43008.7	34514.2
Q9WVK3	Q9WVK3	PECR_RAT	Pecr	Peroxisomal trans-2-enoyl-CoA reductase	1	TMALTWASSGVR	TMALTWASSGVR	2	TMALTWASSGVR2	10158.2	8064.67	15767.2
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	TMASQGGPK	TMASQGGPK	2	TMASQGGPK2			36887.7
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	TMATMGDTLASK	TMATMGDTLASK	2	TMATMGDTLASK2	24491.4	26687.1	30921.2
A1L134	A1L134	AUP1_RAT	Aup1	Lipid droplet-regulating VLDL assembly factor AUP1	1	TMCAVLGLVAR	TMC(UniMod:4)AVLGLVAR	2	TMC(UniMod:4)AVLGLVAR2	16751.6	16537.8	17877.5
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	TMCECMSSYLR	TMC(UniMod:4)EC(UniMod:4)MSSYLR	2	TMC(UniMod:4)EC(UniMod:4)MSSYLR2	18437.6	11603.1	11440.2
M0R7E7	M0R7E7	M0R7E7_RAT	Map2k3	Mitogen activated protein kinase kinase 3	1	TMDAGCKPYMAPER	TMDAGC(UniMod:4)KPYMAPER	3	TMDAGC(UniMod:4)KPYMAPER3	14779.3	9747.62	6309.12
D3ZA85	D3ZA85	D3ZA85_RAT	Nfu1	NFU1 iron-sulfur cluster scaffold homolog, mitochondrial	1	TMDFPTPAAAFR	TMDFPTPAAAFR	2	TMDFPTPAAAFR2	26475.2	22748.2	32576.4
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	TMDVIAEGDPGFK	TMDVIAEGDPGFK	2	TMDVIAEGDPGFK2	17219	22908.3	16583.5
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	TMDVIAEGDPGFKR	TMDVIAEGDPGFKR	3	TMDVIAEGDPGFKR3	27262.4	31575	32701.4
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	TMDYETSESR	TMDYETSESR	2	TMDYETSESR2	133608	107390	116928
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	TMEALEFHTVPLK	TMEALEFHTVPLK	2	TMEALEFHTVPLK2	39850	32715.7	40857.7
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	TMEALEFHTVPLK	TMEALEFHTVPLK	3	TMEALEFHTVPLK3	760636	776001	827723
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	TMEAPYFLPEHIFR	TMEAPYFLPEHIFR	2	TMEAPYFLPEHIFR2	2386.85	6749.71	3449.86
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	TMEAPYFLPEHIFR	TMEAPYFLPEHIFR	3	TMEAPYFLPEHIFR3	44697.4	52573.6	52655.7
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	TMEAVQGLLEQGR	TMEAVQGLLEQGR	2	TMEAVQGLLEQGR2	30168.9	20879.8	22646
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	TMENYVSQFSEVK	TMENYVSQFSEVK	2	TMENYVSQFSEVK2	8.05718e+06	7.74149e+06	9.05996e+06
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	TMENYVSQFSEVK	TMENYVSQFSEVK	3	TMENYVSQFSEVK3	1.01467e+06	1.08896e+06	1.20624e+06
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	TMENYVSQFSEVKER	TMENYVSQFSEVKER	2	TMENYVSQFSEVKER2	7829.18	2765.21	3667.95
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	TMENYVSQFSEVKER	TMENYVSQFSEVKER	3	TMENYVSQFSEVKER3	26605.2	37451	62502.2
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	TMEQIVFPVPSICEFLTK	TMEQIVFPVPSIC(UniMod:4)EFLTK	3	TMEQIVFPVPSIC(UniMod:4)EFLTK3	4709.41	6343.32	3317.05
O54923	O54923	EXOC6_RAT	Exoc6	Exocyst complex component 6	1	TMEQLENVYFPR	TMEQLENVYFPR	2	TMEQLENVYFPR2	20385	18009.2	21136.1
O54923	O54923	EXOC6_RAT	Exoc6	Exocyst complex component 6	1	TMEQLENVYFPR	TMEQLENVYFPR	3	TMEQLENVYFPR3	6758.49	4926.82	9356.55
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	TMEWHEK	TMEWHEK	2	TMEWHEK2	6512.37		2975.24
A0A8I6A583	F1M3X3;A0A8I6A583	A0A8I6A583_RAT	ENSRNOG00000064207	Ig-like domain-containing protein	0	TMEWIGDIK	TMEWIGDIK	2	TMEWIGDIK2	405768	428733	439922
F1M3X3	F1M3X3	F1M3X3_RAT	ENSRNOG00000068908	Ig-like domain-containing protein	1	TMEWIGDIKPDGSNTNYAPSVK	TMEWIGDIKPDGSNTNYAPSVK	3	TMEWIGDIKPDGSNTNYAPSVK3	17060.3	7514.78	12667
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	TMEWVQTIGLR	TMEWVQTIGLR	2	TMEWVQTIGLR2	54510.8	66496.7	69165.2
Q6QI44	Q6QI44	NAA25_RAT	Naa25	N-alpha-acetyltransferase 25, NatB auxiliary subunit	1	TMFLPLAER	TMFLPLAER	2	TMFLPLAER2	9353.21	5472.57	10705.6
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	TMGMADGK	TMGMADGK	2	TMGMADGK2	9211.51	11761.2	12009.5
D4AC36	D4AC36	D4AC36_RAT	Eif3f	Eukaryotic translation initiation factor 3 subunit F	1	TMGVMFTPLTVK	TMGVMFTPLTVK	2	TMGVMFTPLTVK2	105516	98000.7	71026.3
D3ZKQ3	D3ZKQ3	D3ZKQ3_RAT	Glmn	Glomulin, FKBP associated protein	1	TMGWNLVGPVVR	TMGWNLVGPVVR	2	TMGWNLVGPVVR2	5813.61	6530.61	8589.74
G3V8L0	G3V8L0	G3V8L0_RAT	Wdr24	GATOR complex protein WDR24	1	TMHCHLDAPANAISVCR	TMHC(UniMod:4)HLDAPANAISVC(UniMod:4)R	4	TMHC(UniMod:4)HLDAPANAISVC(UniMod:4)R4	3221.47	4111.48	
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	TMHFGTPTAYEK	TMHFGTPTAYEK	2	TMHFGTPTAYEK2	8377.74	5817.79	
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	TMHFGTPTAYEK	TMHFGTPTAYEK	3	TMHFGTPTAYEK3	36154.2	34041.8	28954.4
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	TMHGHDHNVSSVAIMPNGDHIVSASR	TMHGHDHNVSSVAIMPNGDHIVSASR	4	TMHGHDHNVSSVAIMPNGDHIVSASR4	9920.07	8470	6280.76
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	TMHGNTISFSCGLAR	TMHGNTISFSC(UniMod:4)GLAR	3	TMHGNTISFSC(UniMod:4)GLAR3	5521.29	4468.28	5083.68
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	TMIDPTSR	TMIDPTSR	2	TMIDPTSR2	1.21419e+06	1.3885e+06	1.07814e+06
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	TMIDPTSREDPK	TMIDPTSREDPK	3	TMIDPTSREDPK3	81275.5	98953.5	95736.9
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	TMIDPTSREDPKFK	TMIDPTSREDPKFK	4	TMIDPTSREDPKFK4	9046.14	20362.3	9380.89
Q7TS56	Q7TS56	CBR4_RAT	Cbr4	3-oxoacyl-[acyl-carrier-protein] reductase	1	TMIQQGGSIVNVGSIIGLK	TMIQQGGSIVNVGSIIGLK	3	TMIQQGGSIVNVGSIIGLK3		3184.83	4548.65
A0A8I5ZLV4	A0A8I5ZLV4	A0A8I5ZLV4_RAT	Map4k4	Mitogen-activated protein kinase kinase kinase kinase 4	1	TMIVHDDVESEPAMTPSK	TMIVHDDVESEPAMTPSK	3	TMIVHDDVESEPAMTPSK3	35528.2	37479.4	43487.2
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	TMIVINNAIDFVQDNYVLK	TMIVINNAIDFVQDNYVLK	3	TMIVINNAIDFVQDNYVLK3	266850	283978	277092
A0A8I5ZS17	A0A8I5ZS17	A0A8I5ZS17_RAT	Snx25	Sorting nexin 25	1	TMLAEILTTK	TMLAEILTTK	2	TMLAEILTTK2	7820.36	9979.98	7425.22
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	TMLDFPQHVSSDR	TMLDFPQHVSSDR	3	TMLDFPQHVSSDR3	24465.7	21019.3	31522.1
D3ZEJ2	D3ZEJ2	D3ZEJ2_RAT	Mcur1	Mitochondrial calcium uniporter regulator 1	1	TMLEAHK	TMLEAHK	2	TMLEAHK2		3722.74	
Q6PEC4	Q6PEC4	SKP1_RAT	Skp1	S-phase kinase-associated protein 1	1	TMLEDLGMDDEGDDDPVPLPNVNAAILKK	TMLEDLGMDDEGDDDPVPLPNVNAAILKK	4	TMLEDLGMDDEGDDDPVPLPNVNAAILKK4	8179.54	8277.5	8857.12
A0A8I6A5W7	A0A8I6A5W7	A0A8I6A5W7_RAT	Ccdc88a	Coiled coil domain containing 88A	1	TMLEDQLEGTR	TMLEDQLEGTR	2	TMLEDQLEGTR2	4243.81	6127.77	6338.04
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	TMLELINQLDGFDPR	TMLELINQLDGFDPR	2	TMLELINQLDGFDPR2	47508.4	39319.7	40056.1
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	TMLELINQLDGFDPR	TMLELINQLDGFDPR	3	TMLELINQLDGFDPR3	31654.1	26560.6	31294.4
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	TMLELLNQLDGFDSR	TMLELLNQLDGFDSR	2	TMLELLNQLDGFDSR2	10518	13958.8	12243.7
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	TMLELLNQLDGFDSR	TMLELLNQLDGFDSR	3	TMLELLNQLDGFDSR3	11442.8	10186	8708.23
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	TMLELLNQLDGFEATK	TMLELLNQLDGFEATK	2	TMLELLNQLDGFEATK2	62250.7	58059.3	39378.9
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	TMLELLNQLDGFEATK	TMLELLNQLDGFEATK	3	TMLELLNQLDGFEATK3	7744.68	7816.95	
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	TMLELLNQLDGFQPNTQVK	TMLELLNQLDGFQPNTQVK	3	TMLELLNQLDGFQPNTQVK3	34988.4	40243.9	56403.8
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TMLESAGGLIQTAR	TMLESAGGLIQTAR	2	TMLESAGGLIQTAR2	1.856e+06	1.57035e+06	1.66844e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TMLESAGGLIQTAR	TMLESAGGLIQTAR	3	TMLESAGGLIQTAR3	634461	729184	699330
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	TMLESLIADK	TMLESLIADK	2	TMLESLIADK2	625953	699792	582483
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	TMLETEEGILLLVR	TMLETEEGILLLVR	2	TMLETEEGILLLVR2	25092.1	30343.8	32202.8
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	TMLETEEGILLLVR	TMLETEEGILLLVR	3	TMLETEEGILLLVR3	22996.9	23178	24078.3
Q91Y81	Q91Y81	SEPT2_RAT	Septin2	Septin-2	1	TMLITHMQDLQEVTQDLHYENFR	TMLITHMQDLQEVTQDLHYENFR	3	TMLITHMQDLQEVTQDLHYENFR3	7723.05	6721.85	10786.4
Q91Y81	Q91Y81	SEPT2_RAT	Septin2	Septin-2	1	TMLITHMQDLQEVTQDLHYENFR	TMLITHMQDLQEVTQDLHYENFR	4	TMLITHMQDLQEVTQDLHYENFR4	6155.93	17415.7	11908.7
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	TMLQCLK	TMLQC(UniMod:4)LK	2	TMLQC(UniMod:4)LK2	62742.6	73632.2	50964.8
Q923G5	Q923G5	ZDHC7_RAT	Zdhhc7	Palmitoyltransferase ZDHHC7	1	TMLTDPGAVPK	TMLTDPGAVPK	2	TMLTDPGAVPK2	4532.97	3568.62	6601.95
P36372	P36372	TAP2_RAT	Tap2	Antigen peptide transporter 2	1	TMLVIAHR	TMLVIAHR	2	TMLVIAHR2	18793.6	49452.1	20307.4
P60123	A0A0G2K0H9;P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	0	TMLYTPQEMK	TMLYTPQEMK	2	TMLYTPQEMK2	128375	117539	137717
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	TMMACGGSIQTSVNALIPDVLGR	TMMAC(UniMod:4)GGSIQTSVNALIPDVLGR	3	TMMAC(UniMod:4)GGSIQTSVNALIPDVLGR3	71652.5	72227.8	64848.8
G3V8E2	G3V8E2;A0A8I6G7M4	G3V8E2_RAT	Strip1	Striatin interacting protein 1	0	TMMLVVFK	TMMLVVFK	2	TMMLVVFK2	84511.3	77913.4	74056.1
P85107	P85107	TGS1_RAT	Tgs1	Trimethylguanosine synthase	1	TMMSPDGFEIFR	TMMSPDGFEIFR	2	TMMSPDGFEIFR2	6173.92	5664.39	
Q62796	Q62796;A0A096MJZ5	RBP1_RAT	Ralbp1	RalA-binding protein 1	0	TMMYDGIR	TMMYDGIR	2	TMMYDGIR2	19144.5	18216.4	19862.8
Q63484	Q63484	AKT3_RAT	Akt3	RAC-gamma serine/threonine-protein kinase	1	TMNDFDYLK	TMNDFDYLK	2	TMNDFDYLK2	12755.5	9891.15	8388.5
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	TMNDLSSQLSPLDLHPSPK	TMNDLSSQLSPLDLHPSPK	3	TMNDLSSQLSPLDLHPSPK3	129332	151728	175898
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	TMNEVITGMR	TMNEVITGMR	2	TMNEVITGMR2	61353.3	59425.4	62710.6
A0A8I6A6I4	A0A8I6A6I4	A0A8I6A6I4_RAT	Atp11b	Phospholipid-transporting ATPase	1	TMNILELINQK	TMNILELINQK	2	TMNILELINQK2	15264.5		21054.4
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	TMNISPEQPQH	TMNISPEQPQH	2	TMNISPEQPQH2	80218.4	66892.1	78030.7
A0A0G2K6R0	A0A0G2K6R0	A0A0G2K6R0_RAT	Tnrc6b	Trinucleotide repeat containing adaptor 6B	1	TMNLGDFNDIMR	TMNLGDFNDIMR	2	TMNLGDFNDIMR2	7879.31	7757.66	4346.22
Q99MM4	Q99MM4	TRAD1_RAT	Trafd1	TRAF-type zinc finger domain-containing protein 1	1	TMNNVSTCNR	TMNNVSTC(UniMod:4)NR	2	TMNNVSTC(UniMod:4)NR2	4668.79	3292.49	
A0A8I5ZXD6	A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	1	TMNVLAESDPGFK	TMNVLAESDPGFK	2	TMNVLAESDPGFK2	24980.4	28443.9	18969.6
A0A8I5ZXD6	A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	1	TMNVLAESDPGFKR	TMNVLAESDPGFKR	2	TMNVLAESDPGFKR2	4315.76	5266.25	4995.89
A0A8I5ZXD6	A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	1	TMNVLAESDPGFKR	TMNVLAESDPGFKR	3	TMNVLAESDPGFKR3	15876	17332.8	19350
O70248	O70248	APBA3_RAT	Apba3	Amyloid-beta A4 precursor protein-binding family A member 3	1	TMPAATYR	TMPAATYR	2	TMPAATYR2	2827.76		
P17164	P17164	FUCO_RAT	Fuca1	Tissue alpha-L-fucosidase	1	TMPELYDLVNR	TMPELYDLVNR	2	TMPELYDLVNR2	33102.6	15985.2	23789.9
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	TMPGSDWTPNAR	TMPGSDWTPNAR	2	TMPGSDWTPNAR2	68220.8	94899.7	81753.7
Q5RJS8	Q5RJS8	TPST2_RAT	Tpst2	Protein-tyrosine sulfotransferase 2	1	TMPLIFVGGVPR	TMPLIFVGGVPR	2	TMPLIFVGGVPR2	68923	80796.4	77882.8
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	TMPMEQVFAK	TMPMEQVFAK	2	TMPMEQVFAK2	38077.8	38639.2	27320
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	TMPPINLQEK	TMPPINLQEK	2	TMPPINLQEK2	23788.7	22856.7	
B5DEN9	B5DEN9	VPS28_RAT	Vps28	Vacuolar protein sorting-associated protein 28 homolog	1	TMQALEK	TMQALEK	2	TMQALEK2	85230.9	66255.9	86855.7
P01026	P01026	CO3_RAT	C3	Complement C3	1	TMQAQPYSTMHNSNNYLHLSVSR	TMQAQPYSTMHNSNNYLHLSVSR	3	TMQAQPYSTMHNSNNYLHLSVSR3	366385	311031	280746
P01026	P01026	CO3_RAT	C3	Complement C3	1	TMQAQPYSTMHNSNNYLHLSVSR	TMQAQPYSTMHNSNNYLHLSVSR	4	TMQAQPYSTMHNSNNYLHLSVSR4	1.00767e+06	973379	842584
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	TMQEGPGDSVK	TMQEGPGDSVK	2	TMQEGPGDSVK2	27372.1	37237.1	29588.8
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	TMQENSGPK	TMQENSGPK	2	TMQENSGPK2			5.45444e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TMQFEPSTMVYDACR	TMQFEPSTMVYDAC(UniMod:4)R	2	TMQFEPSTMVYDAC(UniMod:4)R2	1.07216e+06	953300	836953
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TMQFEPSTMVYDACR	TMQFEPSTMVYDAC(UniMod:4)R	3	TMQFEPSTMVYDAC(UniMod:4)R3	233551	239096	257891
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	TMQGEGPQLLLSEAVSR	TMQGEGPQLLLSEAVSR	2	TMQGEGPQLLLSEAVSR2	32668.1	33353	40281.2
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	TMQGEGPQLLLSEAVSR	TMQGEGPQLLLSEAVSR	3	TMQGEGPQLLLSEAVSR3	47925.7	40199.6	48161.6
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	TMQGSEVVNVLK	TMQGSEVVNVLK	2	TMQGSEVVNVLK2	37151.5	30039.9	46417.5
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	TMQLNLSR	TMQLNLSR	2	TMQLNLSR2	49709.3	38908.9	43788.7
Q6IFV1	Q6IFV1	K1C14_RAT	Krt14	Keratin, type I cytoskeletal 14	1	TMQNLEIELQSQLSMK	TMQNLEIELQSQLSMK	2	TMQNLEIELQSQLSMK2	7330.98		5940.2
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	TMQNTSDLDTAR	TMQNTSDLDTAR	2	TMQNTSDLDTAR2	25448.9	11426.4	13766.1
A0A1W2Q5Z7	A0A1W2Q5Z7	A0A1W2Q5Z7_RAT	St3gal1	ST3 beta-galactoside alpha-2,3-sialyltransferase 1	1	TMQPLLTAHNALMEEDTYR	TMQPLLTAHNALMEEDTYR	3	TMQPLLTAHNALMEEDTYR3	47099.6	40948.6	44684.1
P14842	P14842	5HT2A_RAT	Htr2a	5-hydroxytryptamine receptor 2A	1	TMQSISNEQK	TMQSISNEQK	2	TMQSISNEQK2	5066.27	5264.59	4559.95
P27605	P27605	HPRT_RAT	Hprt1	Hypoxanthine-guanine phosphoribosyltransferase	1	TMQTLLSLVK	TMQTLLSLVK	2	TMQTLLSLVK2	55328	55835.1	58789.2
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	TMRDCDDVLQTHPSGAQNGIFSIK	TMRDC(UniMod:4)DDVLQTHPSGAQNGIFSIK	3	TMRDC(UniMod:4)DDVLQTHPSGAQNGIFSIK3	23578.2	29364	26436.3
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	TMRDCDDVLQTHPSGAQNGIFSIK	TMRDC(UniMod:4)DDVLQTHPSGAQNGIFSIK	4	TMRDC(UniMod:4)DDVLQTHPSGAQNGIFSIK4	34248.9	45188.4	55943.5
G3V8E2	G3V8E2;A0A8I6G7M4	G3V8E2_RAT	Strip1	Striatin interacting protein 1	0	TMSAIYQK	TMSAIYQK	1	TMSAIYQK1	4221.57	3698.19	
G3V8E2	G3V8E2;A0A8I6G7M4	G3V8E2_RAT	Strip1	Striatin interacting protein 1	0	TMSAIYQK	TMSAIYQK	2	TMSAIYQK2	137719	155531	140835
D3ZLZ7	D3ZLZ7	IMDH1_RAT	Impdh1	Inosine-5'-monophosphate dehydrogenase 1	1	TMSAQIEGGVHGLHSYEK	TMSAQIEGGVHGLHSYEK	3	TMSAQIEGGVHGLHSYEK3	5519.16	6661.82	
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	TMSGHLTGPQAR	TMSGHLTGPQAR	3	TMSGHLTGPQAR3	37621.7	42028.6	42952.9
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	TMSGLDCQSWDSQSPHAHGYIPAK	TMSGLDC(UniMod:4)QSWDSQSPHAHGYIPAK	3	TMSGLDC(UniMod:4)QSWDSQSPHAHGYIPAK3	278228	179234	156649
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	TMSGLDCQSWDSQSPHAHGYIPAK	TMSGLDC(UniMod:4)QSWDSQSPHAHGYIPAK	4	TMSGLDC(UniMod:4)QSWDSQSPHAHGYIPAK4	1.98686e+06	1.87713e+06	1.81887e+06
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	TMSGLDCQSWDSQSPHAHGYIPAKFPSK	TMSGLDC(UniMod:4)QSWDSQSPHAHGYIPAKFPSK	4	TMSGLDC(UniMod:4)QSWDSQSPHAHGYIPAKFPSK4	7258.81	13255.7	11169.3
Q6AYK3	Q6AYK3	INO1_RAT	Isyna1	Inositol-3-phosphate synthase 1	1	TMSIVSYNHLGNNDGQNLSAPLQFR	TMSIVSYNHLGNNDGQNLSAPLQFR	3	TMSIVSYNHLGNNDGQNLSAPLQFR3	1689.17		
Q5XIN4	Q5XIN4	Q5XIN4_RAT	Mtmr9	Myotubularin related protein 9	1	TMSLWSWVNRPSELSK	TMSLWSWVNRPSELSK	3	TMSLWSWVNRPSELSK3	50498.1	111272	59713.8
P16310	P16310	GHR_RAT	Ghr	Growth hormone receptor	1	TMSPIWSTSVPLYSLR	TMSPIWSTSVPLYSLR	2	TMSPIWSTSVPLYSLR2	11011.6	18825.2	12140.4
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	TMSQDLR	TMSQDLR	2	TMSQDLR2	52616.9	41951.7	28516.4
Q9Z1W6	Q9Z1W6	LYRIC_RAT	Mtdh	Protein LYRIC	1	TMSTSDPVEVLIK	TMSTSDPVEVLIK	2	TMSTSDPVEVLIK2	33101.4	15135.3	28034.5
Q4FZV0	Q4FZV0	MANBA_RAT	Manba	Beta-mannosidase	1	TMTEGWISK	TMTEGWISK	2	TMTEGWISK2	6551.14	6760.55	6758.9
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	TMTELEIDMNQR	TMTELEIDMNQR	2	TMTELEIDMNQR2	42156	27123.1	30130.8
P24268	P24268	CATD_RAT	Ctsd	Cathepsin D	1	TMTEVGGSVEDLILK	TMTEVGGSVEDLILK	2	TMTEVGGSVEDLILK2	19929.3	12742.8	14976.3
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	TMTGLDTPVLMVIK	TMTGLDTPVLMVIK	2	TMTGLDTPVLMVIK2	38640.3	37547.2	48679.7
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	TMTGLDTPVLMVIK	TMTGLDTPVLMVIK	3	TMTGLDTPVLMVIK3	2897.52	6828.26	1235.06
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	TMTIHNGMFFSTYDR	TMTIHNGMFFSTYDR	2	TMTIHNGMFFSTYDR2	214108	165525	198889
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	TMTIHNGMFFSTYDR	TMTIHNGMFFSTYDR	3	TMTIHNGMFFSTYDR3	2.10988e+06	1.86353e+06	1.80321e+06
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	TMTIHNGMFFSTYDRDNDGWVTTDPR	TMTIHNGMFFSTYDRDNDGWVTTDPR	4	TMTIHNGMFFSTYDRDNDGWVTTDPR4	5.50635e+06	5.70089e+06	5.28309e+06
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	TMTIHNGMFFSTYDRDNDGWVTTDPRK	TMTIHNGMFFSTYDRDNDGWVTTDPRK	4	TMTIHNGMFFSTYDRDNDGWVTTDPRK4	229465	347188	362374
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	TMTIVLDPK	TMTIVLDPK	2	TMTIVLDPK2	344597	344157	322008
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TMTLFSALR	TMTLFSALR	2	TMTLFSALR2	143628	210290	186642
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	TMTNALR	TMTNALR	2	TMTNALR2	248439	288164	265593
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	TMVAFDMDGK	TMVAFDMDGK	2	TMVAFDMDGK2	9462	15455.1	9437.42
A0A8I6A4X3	A0A8I6A4X3	A0A8I6A4X3_RAT	Selplg	Selectin P ligand	1	TMVAVLEQR	TMVAVLEQR	2	TMVAVLEQR2	12914.3	14770.7	6459.31
A0A0G2JTW1	A0A0G2JTW1	A0A0G2JTW1_RAT	Rap2a	Ras-related protein Rap-2	1	TMVDELFAEIVR	TMVDELFAEIVR	2	TMVDELFAEIVR2	20745.2	11136.1	11462.3
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	TMVEDLVVLVR	TMVEDLVVLVR	2	TMVEDLVVLVR2	244735	225462	207002
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	TMVEDLVVLVR	TMVEDLVVLVR	3	TMVEDLVVLVR3	8913.4	14397.2	11819.9
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	TMVEEDLQR	TMVEEDLQR	2	TMVEEDLQR2	17541.7	15060.3	20888.8
P0C2X9	P0C2X9	AL4A1_RAT	Aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1	TMVGQGK	TMVGQGK	1	TMVGQGK1			2238.79
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	TMVHTACK	TMVHTAC(UniMod:4)K	1	TMVHTAC(UniMod:4)K1			1434.4
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	TMVHTACK	TMVHTAC(UniMod:4)K	2	TMVHTAC(UniMod:4)K2			3243.69
F7EUW3	F7EUW3	F7EUW3_RAT	C2cd2l	C2CD2-like	1	TMVLHCQLAAEEVR	TMVLHC(UniMod:4)QLAAEEVR	3	TMVLHC(UniMod:4)QLAAEEVR3	5305.01	3249.43	4714.81
A0A8J8YPH6	A0A8J8YPH6	A0A8J8YPH6_RAT	Hps4	HPS4, biogenesis of lysosomal organelles complex 3 subunit 2	1	TMVLLPQHPEGVEPGVEPCGSGAQDR	TMVLLPQHPEGVEPGVEPC(UniMod:4)GSGAQDR	3	TMVLLPQHPEGVEPGVEPC(UniMod:4)GSGAQDR3	47794	77469.8	53454.8
P17105	P17105	IP3KA_RAT	Itpka	Inositol-trisphosphate 3-kinase A	1	TMVNLPVMSPFK	TMVNLPVMSPFK	2	TMVNLPVMSPFK2		10373.5	
B2RYW9	B2RYW9	FAHD2_RAT	Fahd2	Fumarylacetoacetate hydrolase domain-containing protein 2	1	TMVQFLER	TMVQFLER	2	TMVQFLER2	81611.5	81467	79313
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	TMVQLFEK	TMVQLFEK	2	TMVQLFEK2	39270.1	39652.8	40999.3
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	TMVQLGICAFR	TMVQLGIC(UniMod:4)AFR	2	TMVQLGIC(UniMod:4)AFR2	50030.2	42667.1	52175.1
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	TMVSQQDK	TMVSQQDK	2	TMVSQQDK2			61311.1
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	TMVVSEVENCSEYHISIQKPSDVVNPLDLR	TMVVSEVENC(UniMod:4)SEYHISIQKPSDVVNPLDLR	4	TMVVSEVENC(UniMod:4)SEYHISIQKPSDVVNPLDLR4	42251.5	49475.1	44298.6
Q1HAQ0	Q1HAQ0	PCAT1_RAT	Lpcat1	Lysophosphatidylcholine acyltransferase 1	1	TMWFAGGFHR	TMWFAGGFHR	2	TMWFAGGFHR2	2460.99		
Q1HAQ0	Q1HAQ0	PCAT1_RAT	Lpcat1	Lysophosphatidylcholine acyltransferase 1	1	TMWFAGGFHR	TMWFAGGFHR	3	TMWFAGGFHR3	10975.6	12259.5	14678.5
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	TMYDGFQR	TMYDGFQR	2	TMYDGFQR2	41213.4	35191.8	31646.2
Q9WVB1	A0A0G2JT78;Q9WVB1	RAB6A_RAT	Rab6a	Ras-related protein Rab-6A	0	TMYLEDR	TMYLEDR	2	TMYLEDR2	934123	856207	918814
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	TMYLLGYIPK	TMYLLGYIPK	2	TMYLLGYIPK2	66063.3	55148.9	68954.8
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	TMYPPPVTK	TMYPPPVTK	2	TMYPPPVTK2	17029.2	16739.7	
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	TMYSVPNGK	TMYSVPNGK	2	TMYSVPNGK2	28402.9	46320.6	28938.6
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	TMYVLPFSMGPLGSPLSR	TMYVLPFSMGPLGSPLSR	2	TMYVLPFSMGPLGSPLSR2	19091	31456.6	29332
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	TMYVLPFSMGPLGSPLSR	TMYVLPFSMGPLGSPLSR	3	TMYVLPFSMGPLGSPLSR3	4310.76	4608.47	5783.22
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	TMYWTDSGLDK	TMYWTDSGLDK	2	TMYWTDSGLDK2	59059.2	63333.5	59171.1
Q6P6R2	Q6P6R2	DLDH_RAT	Dld	Dihydrolipoyl dehydrogenase, mitochondrial	1	TNADTDGMVK	TNADTDGMVK	2	TNADTDGMVK2	146067	117284	127651
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	TNADVMTALSQGYR	TNADVMTALSQGYR	2	TNADVMTALSQGYR2	502156	534185	599030
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	TNADVMTALSQGYR	TNADVMTALSQGYR	3	TNADVMTALSQGYR3	73894.6	76165.5	91665
Q4V8B2	Q4V8B2	DCNL3_RAT	Dcun1d3	DCN1-like protein 3	1	TNAEESSLQR	TNAEESSLQR	2	TNAEESSLQR2	9270.77		5321.46
Q6IMF3	Q6IMF3	K2C1_RAT	Krt1	Keratin, type II cytoskeletal 1	1	TNAENEFVTIK	TNAENEFVTIK	2	TNAENEFVTIK2	1.32706e+06	1.26233e+06	996864
Q6IMF3	Q6IMF3	K2C1_RAT	Krt1	Keratin, type II cytoskeletal 1	1	TNAENEFVTIK	TNAENEFVTIK	3	TNAENEFVTIK3		4285.8	3010.7
Q6IMF3	Q6IMF3	K2C1_RAT	Krt1	Keratin, type II cytoskeletal 1	1	TNAENEFVTIKK	TNAENEFVTIKK	2	TNAENEFVTIKK2	11082.3	5104.15	6040.6
Q6IMF3	Q6IMF3	K2C1_RAT	Krt1	Keratin, type II cytoskeletal 1	1	TNAENEFVTIKK	TNAENEFVTIKK	3	TNAENEFVTIKK3	65867.8	67898.3	49392.2
A0A8I6A0B7	A0A8I6A0B7	A0A8I6A0B7_RAT	Nipsnap3a	Nipsnap homolog 3B	1	TNAFLQNFQK	TNAFLQNFQK	2	TNAFLQNFQK2	176981	164717	206682
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	TNAFLVATSAPQAVLYNDR	TNAFLVATSAPQAVLYNDR	3	TNAFLVATSAPQAVLYNDR3	200566	205234	196484
Q5XIJ6	Q5XIJ6	BABA1_RAT	Babam1	BRISC and BRCA1-A complex member 1	1	TNALNVSQK	TNALNVSQK	2	TNALNVSQK2	66815.1	91580.2	91881.5
D3ZKE1	D3ZKE1	D3ZKE1_RAT	Uvrag	UV radiation resistance associated	1	TNAQLTIR	TNAQLTIR	2	TNAQLTIR2	4975.17	10879.2	18002.9
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	TNATNNMNLSR	TNATNNMNLSR	2	TNATNNMNLSR2	12952.6	15830.9	10599.1
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	TNAVSEIK	TNAVSEIK	1	TNAVSEIK1	5400.15	6862.7	4664.15
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	TNAVSEIK	TNAVSEIK	2	TNAVSEIK2	361163	396456	411732
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	TNAVSEIKR	TNAVSEIKR	2	TNAVSEIKR2	10714	13660.5	9721.14
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	TNAVVKDPSK	TNAVVKDPSK	2	TNAVVKDPSK2	13604		6383.82
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	TNAWSWGILK	TNAWSWGILK	2	TNAWSWGILK2	1.19641e+06	1.19476e+06	1.46751e+06
A0A8I6A895	A0A8I6A895	A0A8I6A895_RAT	Zmym3	Zinc finger MYM-type containing 3	1	TNCCDQCGAYIYAR	TNC(UniMod:4)C(UniMod:4)DQC(UniMod:4)GAYIYAR	2	TNC(UniMod:4)C(UniMod:4)DQC(UniMod:4)GAYIYAR2	1157.27		2238.74
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	TNCEGTIPR	TNC(UniMod:4)EGTIPR	2	TNC(UniMod:4)EGTIPR2	69982.6	50630.9	52045.9
P02770	P02770	ALBU_RAT	Alb	Albumin	1	TNCELYEK	TNC(UniMod:4)ELYEK	2	TNC(UniMod:4)ELYEK2	9.29119e+06	50973.8	8.85678e+06
P02770	P02770	ALBU_RAT	Alb	Albumin	1	TNCELYEKLGEYGFQNAVLVR	TNC(UniMod:4)ELYEKLGEYGFQNAVLVR	3	TNC(UniMod:4)ELYEKLGEYGFQNAVLVR3	4429.44	7820.73	7283.94
Q0Z843	Q0Z843	Q0Z843_RAT	Fig4	FIG4 phosphoinositide 5-phosphatase	1	TNCVDCLDR	TNC(UniMod:4)VDC(UniMod:4)LDR	2	TNC(UniMod:4)VDC(UniMod:4)LDR2	8352.85	11307.8	9648.58
A0A8I6GKX8	A0A8I6GKX8	A0A8I6GKX8_RAT	Iqsec2	IQ motif and Sec7 domain ArfGEF 2	1	TNDDHVSQVQAVER	TNDDHVSQVQAVER	3	TNDDHVSQVQAVER3	2943.88	4275.04	4685.67
A0A8I6G251	A0A8I6G251	A0A8I6G251_RAT	Tnpo3	Transportin 3	1	TNDEVIHSIFK	TNDEVIHSIFK	3	TNDEVIHSIFK3	3143.19	6779.21	2083.46
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	TNDKWVIPALK	TNDKWVIPALK	2	TNDKWVIPALK2	8257.97	8060.21	6495.35
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	TNDKWVIPALK	TNDKWVIPALK	3	TNDKWVIPALK3	926736	916347	909453
A0A8I5ZM79	A0A8I5ZM79	A0A8I5ZM79_RAT	Psmd7	Proteasome 26S subunit, non-ATPase 7	1	TNDQMVVVYLASLIR	TNDQMVVVYLASLIR	3	TNDQMVVVYLASLIR3	6285.69		
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	TNECLDNNGGCSHICK	TNEC(UniMod:4)LDNNGGC(UniMod:4)SHIC(UniMod:4)K	2	TNEC(UniMod:4)LDNNGGC(UniMod:4)SHIC(UniMod:4)K2	2296.27	2781.34	2018.96
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	TNECLDNNGGCSHICK	TNEC(UniMod:4)LDNNGGC(UniMod:4)SHIC(UniMod:4)K	3	TNEC(UniMod:4)LDNNGGC(UniMod:4)SHIC(UniMod:4)K3	36401.3	47541.3	42199.4
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	TNEELVAFLSK	TNEELVAFLSK	2	TNEELVAFLSK2	52191.6	64462.4	48112.1
Q9R0T4	Q9R0T4;D3ZL74;Q6W3B0	CADH1_RAT	Cdh1	Cadherin-1	0	TNEGILK	TNEGILK	1	TNEGILK1	12024.2	10488.5	13092.5
Q9R0T4	Q9R0T4;D3ZL74;Q6W3B0	CADH1_RAT	Cdh1	Cadherin-1	0	TNEGILK	TNEGILK	2	TNEGILK2	391218	402708	429279
G3V6S8	G3V6S8	SRSF6_RAT	Srsf6	Serine/arginine-rich splicing factor 6	1	TNEGVIEFR	TNEGVIEFR	2	TNEGVIEFR2	16160.9	16473.7	15422.5
A0A8I6AM66	A0A8I6AM66	A0A8I6AM66_RAT	Cdh15	Cadherin 15	1	TNEGVLSVVKPLDYESR	TNEGVLSVVKPLDYESR	3	TNEGVLSVVKPLDYESR3	11116.3	14147.7	5332.51
P29315	P29315	RINI_RAT	Rnh1	Ribonuclease inhibitor	1	TNELGDAGVGLVLQGLQNPTCK	TNELGDAGVGLVLQGLQNPTC(UniMod:4)K	3	TNELGDAGVGLVLQGLQNPTC(UniMod:4)K3	13725.6	14877.6	18620.7
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	TNELVCTSR	TNELVC(UniMod:4)TSR	2	TNELVC(UniMod:4)TSR2	12654.1	6673.03	11765
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	TNEMFINAIK	TNEMFINAIK	2	TNEMFINAIK2	23426.5	22036	20093.2
Q5M853	Q5M853	KXDL1_RAT	Kxd1	KxDL motif-containing protein 1	1	TNEMLLNFNNLSSVR	TNEMLLNFNNLSSVR	2	TNEMLLNFNNLSSVR2	3466.12	5065.22	2266.46
A0A8I5ZU98	A0A8I5ZU98	A0A8I5ZU98_RAT	Osbpl5	Oxysterol-binding protein	1	TNESGSDLLDSPGGPR	TNESGSDLLDSPGGPR	2	TNESGSDLLDSPGGPR2	1373.34		
O88664	O88664	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	1	TNEVVAIK	TNEVVAIK	2	TNEVVAIK2	20621.7	12727.7	8043.14
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	TNFDAFPDK	TNFDAFPDK	2	TNFDAFPDK2	33832.2	37768.3	35018.6
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	TNFDNDIALVQLK	TNFDNDIALVQLK	2	TNFDNDIALVQLK2	1.76057e+06	1.75942e+06	1.60205e+06
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	TNFDNDIALVQLK	TNFDNDIALVQLK	3	TNFDNDIALVQLK3	146948	131833	136412
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	TNFDNDIALVQLKDPVK	TNFDNDIALVQLKDPVK	2	TNFDNDIALVQLKDPVK2	1.256e+06	1.41093e+06	1.29957e+06
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	TNFDNDIALVQLKDPVK	TNFDNDIALVQLKDPVK	3	TNFDNDIALVQLKDPVK3	30004.4	30492.6	1.14879e+07
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	TNFDNDIALVQLKDPVK	TNFDNDIALVQLKDPVK	4	TNFDNDIALVQLKDPVK4	29532	41796.5	33297.5
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	TNFIEADK	TNFIEADK	2	TNFIEADK2	33326.7	34804.9	27280.1
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	TNFIEADKYFLPFELACQSK	TNFIEADKYFLPFELAC(UniMod:4)QSK	3	TNFIEADKYFLPFELAC(UniMod:4)QSK3	13251.6	16670.2	12614.3
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	TNFISSHTEKPVR	TNFISSHTEKPVR	3	TNFISSHTEKPVR3	31360.6	53339.9	23784.3
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	TNFMYQVDTLK	TNFMYQVDTLK	2	TNFMYQVDTLK2	63131.7	56826.9	55924.5
G3V6G1	G3V6G1	G3V6G1_RAT	Jchain	Joining chain of multimeric IgA and IgM	1	TNFVYHLSDVCK	TNFVYHLSDVC(UniMod:4)K	2	TNFVYHLSDVC(UniMod:4)K2	156847	101337	130714
G3V6G1	G3V6G1	G3V6G1_RAT	Jchain	Joining chain of multimeric IgA and IgM	1	TNFVYHLSDVCK	TNFVYHLSDVC(UniMod:4)K	3	TNFVYHLSDVC(UniMod:4)K3	1.76824e+06	1.53825e+06	1.65377e+06
G3V6G1	G3V6G1	G3V6G1_RAT	Jchain	Joining chain of multimeric IgA and IgM	1	TNFVYHLSDVCKK	TNFVYHLSDVC(UniMod:4)KK	2	TNFVYHLSDVC(UniMod:4)KK2	19310.6	18948	17831
G3V6G1	G3V6G1	G3V6G1_RAT	Jchain	Joining chain of multimeric IgA and IgM	1	TNFVYHLSDVCKK	TNFVYHLSDVC(UniMod:4)KK	3	TNFVYHLSDVC(UniMod:4)KK3	498236	465458	564896
G3V6G1	G3V6G1	G3V6G1_RAT	Jchain	Joining chain of multimeric IgA and IgM	1	TNFVYHLSDVCKK	TNFVYHLSDVC(UniMod:4)KK	4	TNFVYHLSDVC(UniMod:4)KK4	265325	354675	358996
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	TNFYKPFHGDIQCGGHAR	TNFYKPFHGDIQC(UniMod:4)GGHAR	3	TNFYKPFHGDIQC(UniMod:4)GGHAR3	4344.96	2405.01	3238.8
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	TNFYKPFHGDIQCGGHAR	TNFYKPFHGDIQC(UniMod:4)GGHAR	4	TNFYKPFHGDIQC(UniMod:4)GGHAR4	25740.3	19060.8	25367.3
M0R3L8	M0R3L8	M0R3L8_RAT	Gba	Glucosylceramidase	1	TNGAVNGK	TNGAVNGK	2	TNGAVNGK2			47347.6
P15127	P15127	INSR_RAT	Insr	Insulin receptor	1	TNGDQASCENELLK	TNGDQASC(UniMod:4)ENELLK	2	TNGDQASC(UniMod:4)ENELLK2	909.891	1457.79	
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	TNGFSLESCR	TNGFSLESC(UniMod:4)R	2	TNGFSLESC(UniMod:4)R2	57037.8	54142.8	39453.4
A0A8I5ZQA7	A0A8I5ZQA7	A0A8I5ZQA7_RAT	Serpinb6b	Serine (or cysteine) peptidase inhibitor, clade B, member 6b	1	TNGIVFCGR	TNGIVFC(UniMod:4)GR	2	TNGIVFC(UniMod:4)GR2	2614.93	2436.59	
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	TNGSALCTR	TNGSALC(UniMod:4)TR	2	TNGSALC(UniMod:4)TR2		151938	138962
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	TNGVSDVQLSPTLQR	TNGVSDVQLSPTLQR	2	TNGVSDVQLSPTLQR2	8758.34	3963.4	2841.9
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	TNHGGSLVR	TNHGGSLVR	2	TNHGGSLVR2	6158.75		4090.74
P63245	P63245	RACK1_RAT	Rack1	Small ribosomal subunit protein RACK1	1	TNHIGHTGYLNTVTVSPDGSLCASGGK	TNHIGHTGYLNTVTVSPDGSLC(UniMod:4)ASGGK	3	TNHIGHTGYLNTVTVSPDGSLC(UniMod:4)ASGGK3	24552.8	3892.88	6028.5
P63245	P63245	RACK1_RAT	Rack1	Small ribosomal subunit protein RACK1	1	TNHIGHTGYLNTVTVSPDGSLCASGGK	TNHIGHTGYLNTVTVSPDGSLC(UniMod:4)ASGGK	4	TNHIGHTGYLNTVTVSPDGSLC(UniMod:4)ASGGK4	86502.8	10796.1	8287.28
P49432	P49432	ODPB_RAT	Pdhb	Pyruvate dehydrogenase E1 component subunit beta, mitochondrial	1	TNHLVTVEGGWPQFGVGAEICAR	TNHLVTVEGGWPQFGVGAEIC(UniMod:4)AR	3	TNHLVTVEGGWPQFGVGAEIC(UniMod:4)AR3		6814.44	
D3ZES2	D3ZES2	D3ZES2_RAT	Trappc6b	Trafficking protein particle complex subunit 6B	1	TNHQGIYVLQDNK	TNHQGIYVLQDNK	2	TNHQGIYVLQDNK2	4174.6		3078.11
D3ZES2	D3ZES2	D3ZES2_RAT	Trappc6b	Trafficking protein particle complex subunit 6B	1	TNHQGIYVLQDNK	TNHQGIYVLQDNK	3	TNHQGIYVLQDNK3	19495.3	16716.1	11246.3
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	TNHSNIMDDPFIR	TNHSNIMDDPFIR	2	TNHSNIMDDPFIR2	8342.76	4623.74	5396.37
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	TNHSNIMDDPFIR	TNHSNIMDDPFIR	3	TNHSNIMDDPFIR3	79178.8	76603.4	66595.8
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	TNHSNIMDDPFIREHIEELLR	TNHSNIMDDPFIREHIEELLR	4	TNHSNIMDDPFIREHIEELLR4	13882.8	16222.4	13179.6
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	TNIAMLTVLHEIR	TNIAMLTVLHEIR	2	TNIAMLTVLHEIR2		2336.44	2335.95
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	TNIAMLTVLHEIR	TNIAMLTVLHEIR	3	TNIAMLTVLHEIR3	14567.8	15933.8	18231.7
P15650	P15650	ACADL_RAT	Acadl	Long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	TNICVTR	TNIC(UniMod:4)VTR	2	TNIC(UniMod:4)VTR2	139885	162862	168169
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	TNIFQIQR	TNIFQIQR	2	TNIFQIQR2	55533.4	61826.7	71915.7
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	TNISDEESEQATEMLVHNAQNLMQSVK	TNISDEESEQATEMLVHNAQNLMQSVK	4	TNISDEESEQATEMLVHNAQNLMQSVK4	17653.6	15669.5	8257.37
Q5FWU0	Q5FWU0	Q5FWU0_RAT	Wasf2	Wiskott-Aldrich syndrome protein family member	1	TNITLANVIR	TNITLANVIR	2	TNITLANVIR2	309278	310710	335147
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	TNIVFGTDVPCWFVHNSGK	TNIVFGTDVPC(UniMod:4)WFVHNSGK	3	TNIVFGTDVPC(UniMod:4)WFVHNSGK3	7068.05	5416.24	2739.7
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	TNLAMMR	TNLAMMR	2	TNLAMMR2	108478	85970.5	62160.5
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	TNLAMMRPALPGWK	TNLAMMRPALPGWK	3	TNLAMMRPALPGWK3	48599.4	50172.9	52110.1
Q5BJP5	Q5BJP5	TM230_RAT	Tmem230	Transmembrane protein 230	1	TNLATGIPSSK	TNLATGIPSSK	2	TNLATGIPSSK2	23349.6	26448.9	28462.8
Q6AYT3	Q6AYT3;A0A8I5YBA4	RTCB_RAT	Rtcb	RNA-splicing ligase RtcB homolog	0	TNLDESDVQPVK	TNLDESDVQPVK	2	TNLDESDVQPVK2	12961.9	9475.68	12128.2
Q6AYT3	Q6AYT3;A0A8I5YBA4	RTCB_RAT	Rtcb	RNA-splicing ligase RtcB homolog	0	TNLDESDVQPVKEQLAQAMFDHIPVGVGSK	TNLDESDVQPVKEQLAQAMFDHIPVGVGSK	4	TNLDESDVQPVKEQLAQAMFDHIPVGVGSK4	1530.56	5243.46	2397.1
Q5RK19	Q5RK19	SNF8_RAT	Snf8	Vacuolar-sorting protein SNF8	1	TNLEEFASK	TNLEEFASK	2	TNLEEFASK2	11575.5	6268.98	12474.6
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	TNLEFLQEQFNSIAAHVLHCTDSGFGAR	TNLEFLQEQFNSIAAHVLHC(UniMod:4)TDSGFGAR	4	TNLEFLQEQFNSIAAHVLHC(UniMod:4)TDSGFGAR4	12046.1	6157.19	8630.55
Q64165	Q64165	Q64165_RAT	Gcnt1	Glucosaminyl (N-acetyl) transferase 1	1	TNLEIVR	TNLEIVR	2	TNLEIVR2	33167.3	42104.1	46686.2
E9PT20	E9PT20	E9PT20_RAT	Abl1	Tyrosine-protein kinase	1	TNLFSALIK	TNLFSALIK	2	TNLFSALIK2	2023.14	1094.34	
B5DF91	B5DF91	ELAV1_RAT	Elavl1	ELAV-like protein 1	1	TNLIVNYLPQNMTQEELR	TNLIVNYLPQNMTQEELR	3	TNLIVNYLPQNMTQEELR3	7989.24	12302	16181.6
A0A8I6ASC6	A0A8I6ASC6	A0A8I6ASC6_RAT	Igdcc4	Immunoglobulin superfamily, DCC subclass, member 4	1	TNLLIASAQPR	TNLLIASAQPR	2	TNLLIASAQPR2	16499.9	15639.6	10519.3
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	TNLLQVCER	TNLLQVC(UniMod:4)ER	2	TNLLQVC(UniMod:4)ER2	1.58245e+06	1.55156e+06	1.54872e+06
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	TNLNMPHSLPQR	TNLNMPHSLPQR	2	TNLNMPHSLPQR2	27732.8	22682.9	14820.8
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	TNLNMPHSLPQR	TNLNMPHSLPQR	3	TNLNMPHSLPQR3	336995	418129	395997
Q5U211	A0A096MKE2;Q5U211	SNX3_RAT	Snx3	Sorting nexin-3	0	TNLPIFK	TNLPIFK	2	TNLPIFK2	40428.7	49830.7	37741.7
Q7TP54	Q7TP54	RIPR2_RAT	Ripor2	Rho family-interacting cell polarization regulator 2	1	TNLQLQK	TNLQLQK	2	TNLQLQK2	4688.47	4230.24	8596.16
Q66HG9	Q66HG9	MAVS_RAT	Mavs	Mitochondrial antiviral-signaling protein	1	TNLSPGVTVSALSAK	TNLSPGVTVSALSAK	2	TNLSPGVTVSALSAK2	71434.3	67836.2	66801.3
Q66HG9	Q66HG9	MAVS_RAT	Mavs	Mitochondrial antiviral-signaling protein	1	TNLSPGVTVSALSAK	TNLSPGVTVSALSAK	3	TNLSPGVTVSALSAK3	1911.87	3436.28	2451.12
Q2PQA9	Q2PQA9;Q6QLM7	KINH_RAT	Kif5b	Kinesin-1 heavy chain	0	TNLSVHEDK	TNLSVHEDK	2	TNLSVHEDK2		25034.1	
P51111	P51111	HD_RAT	Htt	Huntingtin	1	TNLTSVTK	TNLTSVTK	2	TNLTSVTK2	46490.4	69237.2	59815.2
Q6ZXC7	Q6ZXC7	Q6ZXC7_RAT	St8sia6	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6	1	TNLVTVNPSIITLK	TNLVTVNPSIITLK	2	TNLVTVNPSIITLK2	21797.8	29929.7	28625.5
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	TNLYIHPTADLATEEVSQMR	TNLYIHPTADLATEEVSQMR	3	TNLYIHPTADLATEEVSQMR3	179215	214883	171516
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	TNLYQDDAVTGEAAGLALGLVMLGSK	TNLYQDDAVTGEAAGLALGLVMLGSK	3	TNLYQDDAVTGEAAGLALGLVMLGSK3		11585.8	5727.12
Q03346	Q03346	MPPB_RAT	Pmpcb	Mitochondrial-processing peptidase subunit beta	1	TNMLLQLDGSTPICEDIGR	TNMLLQLDGSTPIC(UniMod:4)EDIGR	3	TNMLLQLDGSTPIC(UniMod:4)EDIGR3	9320.39	9971.18	7194.18
A2RRU1	P17625;A2RRU1	GYS1_RAT	Gys1	Glycogen [starch] synthase, muscle	0	TNNFNVETLK	TNNFNVETLK	2	TNNFNVETLK2	27954.1	17421.9	38854.9
A0A8I6A8Q1	A0A8I6A8Q1	A0A8I6A8Q1_RAT	A2ml1	Alpha-2-macroglobulin-like 1	1	TNNMIYWEKDEKPK	TNNMIYWEKDEKPK	4	TNNMIYWEKDEKPK4	8293.61	5039.31	
A0A0G2JWA3	A0A0G2JWA3	A0A0G2JWA3_RAT	Xpo7	Exportin 7	1	TNNPLPLEQR	TNNPLPLEQR	2	TNNPLPLEQR2	11246.8	10657.3	9441.19
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	TNNPQFDEVFYFEVTRPCSYSK	TNNPQFDEVFYFEVTRPC(UniMod:4)SYSK	3	TNNPQFDEVFYFEVTRPC(UniMod:4)SYSK3	134173	147521	124451
P11608	P11608	ATP8_RAT	Mt-atp8	ATP synthase protein 8	1	TNNPWESK	TNNPWESK	2	TNNPWESK2	10101.4	12418.8	11744.6
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	TNNVSEHEDTDKYR	TNNVSEHEDTDKYR	2	TNNVSEHEDTDKYR2	4008.37		5215.34
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	TNNVSEHEDTDKYR	TNNVSEHEDTDKYR	3	TNNVSEHEDTDKYR3	2856.78		6341.4
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	TNNVSEHEDTDKYR	TNNVSEHEDTDKYR	4	TNNVSEHEDTDKYR4	51148.5		56473.1
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	TNNYQLSDELR	TNNYQLSDELR	2	TNNYQLSDELR2	4547.5	5426.86	5364.96
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	TNPEAQALWQVVGSSVIMR	TNPEAQALWQVVGSSVIMR	3	TNPEAQALWQVVGSSVIMR3	26422.9	23836.4	43641.7
D3ZWA8	D3ZWA8	D3ZWA8_RAT	Appl1	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1	1	TNPFGESGGSTK	TNPFGESGGSTK	2	TNPFGESGGSTK2	13711.7	8566.49	11868.7
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	TNPIETTGAR	TNPIETTGAR	2	TNPIETTGAR2	26563.7	21461.6	28942.4
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	TNPIQVSDIR	TNPIQVSDIR	2	TNPIQVSDIR2	169125	146559	142129
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	TNPPLIQEK	TNPPLIQEK	2	TNPPLIQEK2	25637.5	16670.4	17386.1
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	TNPPLIQEKPAK	TNPPLIQEKPAK	2	TNPPLIQEKPAK2	31785.2	34249.7	36184.1
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	TNPPLIQEKPAK	TNPPLIQEKPAK	3	TNPPLIQEKPAK3	304508	340906	283993
A0A8I6AP98	A0A8I6AP98	A0A8I6AP98_RAT	Mettl27	Methyltransferase like 27	1	TNPSNLPYK	TNPSNLPYK	2	TNPSNLPYK2	24459.3	18593	25926.3
Q2LC84	Q2LC84	NUMB_RAT	Numb	Protein numb homolog	1	TNPSPTNPFSSDAQK	TNPSPTNPFSSDAQK	2	TNPSPTNPFSSDAQK2	20826.7	27607.8	35706.1
A0A8I6GFC7	A0A8I6GFC7	A0A8I6GFC7_RAT	Ubp1	Upstream binding protein 1	1	TNPSQLNAVEFLWDPAK	TNPSQLNAVEFLWDPAK	2	TNPSQLNAVEFLWDPAK2	12224.1	2630.02	5182.03
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	TNPVVQR	TNPVVQR	2	TNPVVQR2	66168.6	65135.7	60933.5
Q5U2N3	Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	1	TNQAYAAFLR	TNQAYAAFLR	2	TNQAYAAFLR2		9307.09	
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	TNQEILK	TNQEILK	2	TNQEILK2	13976.8	9907.89	16982.6
Q07936	Q07936	ANXA2_RAT	Anxa2	Annexin A2	1	TNQELQEINR	TNQELQEINR	2	TNQELQEINR2	23710	19293.1	22148.1
D3ZU83	D3ZU83	D3ZU83_RAT	Ergic3	Endoplasmic reticulum-Golgi intermediate compartment protein	1	TNQFSVTR	TNQFSVTR	2	TNQFSVTR2	54045.2	55493.8	51107.3
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	TNQGIPELNASSVGMAK	TNQGIPELNASSVGMAK	2	TNQGIPELNASSVGMAK2	33041.6	36178.6	29291
P01026	P01026	CO3_RAT	C3	Complement C3	1	TNQGLQTDQR	TNQGLQTDQR	2	TNQGLQTDQR2	851359	620799	614665
P01026	P01026	CO3_RAT	C3	Complement C3	1	TNQGLQTDQREDPECAK	TNQGLQTDQREDPEC(UniMod:4)AK	3	TNQGLQTDQREDPEC(UniMod:4)AK3	36970.3	37762.7	19751.7
P01026	P01026	CO3_RAT	C3	Complement C3	1	TNQGLQTDQREDPECAKPAAR	TNQGLQTDQREDPEC(UniMod:4)AKPAAR	3	TNQGLQTDQREDPEC(UniMod:4)AKPAAR3	18269.4	17598.4	13047.7
P01026	P01026	CO3_RAT	C3	Complement C3	1	TNQGLQTDQREDPECAKPAAR	TNQGLQTDQREDPEC(UniMod:4)AKPAAR	4	TNQGLQTDQREDPEC(UniMod:4)AKPAAR4	100864	92994.9	74614.1
Q568Z6	Q568Z6	IST1_RAT	Ist1	IST1 homolog	1	TNQIGTVNDR	TNQIGTVNDR	2	TNQIGTVNDR2	64859.1	63376.1	45554.1
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	TNQLTEALETIK	TNQLTEALETIK	2	TNQLTEALETIK2	15190.1	13393	17860.7
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	TNQLTEALETIKK	TNQLTEALETIKK	3	TNQLTEALETIKK3	1213.84	1899.73	
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	TNQLVEDFTQQDLEEGR	TNQLVEDFTQQDLEEGR	3	TNQLVEDFTQQDLEEGR3	21164.2	20817	26373.5
Q5FVJ0	Q5FVJ0	RUFY3_RAT	Rufy3	Protein RUFY3	1	TNQMAATIK	TNQMAATIK	2	TNQMAATIK2	6993.22		4093.61
Q66H59	Q66H59	NPL_RAT	Npl	N-acetylneuraminate lyase	1	TNQMLEAFEQK	TNQMLEAFEQK	2	TNQMLEAFEQK2	26255.4	37212	16658
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	TNQMNLQNGATK	TNQMNLQNGATK	2	TNQMNLQNGATK2	5121.71	2560.75	6895
F1M8P2	F1M8P2	F1M8P2_RAT	Zyg11b	Zyg-11 family member B, cell cycle regulator	1	TNQNSVDTTLK	TNQNSVDTTLK	2	TNQNSVDTTLK2	3751.16	1250.63	
B2RYI0	B2RYI0	WDR91_RAT	Wdr91	WD repeat-containing protein 91	1	TNQVQEENEVLR	TNQVQEENEVLR	2	TNQVQEENEVLR2	13644.9	11222.4	9647.09
P12001	P12001	RL18_RAT	Rpl18	Large ribosomal subunit protein eL18	1	TNRPPLSLSR	TNRPPLSLSR	3	TNRPPLSLSR3	98680.6	115025	84643.9
Q5BJQ2	Q5BJQ2	MINY1_RAT	Mindy1	Ubiquitin carboxyl-terminal hydrolase MINDY-1	1	TNSAETVESEK	TNSAETVESEK	2	TNSAETVESEK2	92232.1	78873.6	85390.9
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	TNSGISSASGGSTEPTTPDSERPAQALLR	TNSGISSASGGSTEPTTPDSERPAQALLR	3	TNSGISSASGGSTEPTTPDSERPAQALLR3	13250	17072.9	13412.4
Q6AYF8	Q6AYF8;M0R455	Q6AYF8_RAT	Serpinb9	Serpin family B member 9	0	TNSILFCGR	TNSILFC(UniMod:4)GR	2	TNSILFC(UniMod:4)GR2	29291.4	23644.9	22974.3
A0A8I5Y735	A0A8I5Y735	A0A8I5Y735_RAT	ENSRNOG00000066904	Immunoglobulin V-set domain-containing protein	1	TNSLQTGIPSR	TNSLQTGIPSR	2	TNSLQTGIPSR2	662623	577666	568420
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	TNSLVFR	TNSLVFR	2	TNSLVFR2	49401.7	63272.7	46878.2
A0A8I5Y9U2	A0A8I5Y9U2	A0A8I5Y9U2_RAT	Cnot2	CCR4-NOT transcription complex, subunit 2	1	TNSMSSSGLGSPNR	TNSMSSSGLGSPNR	2	TNSMSSSGLGSPNR2	1698.01	1895.6	3938.31
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	TNSSDSERSPDLGHSTQIPR	TNSSDSERSPDLGHSTQIPR	4	TNSSDSERSPDLGHSTQIPR4	4328.59	11237	2632.39
P12001	A0A8I6A1Y7;P12001;A0A8I6A209	RL18_RAT	Rpl18	Large ribosomal subunit protein eL18	0	TNSTFNQVVLK	TNSTFNQVVLK	2	TNSTFNQVVLK2	25247.9	23775.3	25004.7
Q62910	Q62910	SYNJ1_RAT	Synj1	Synaptojanin-1	1	TNSVQAFLGLEMLAK	TNSVQAFLGLEMLAK	2	TNSVQAFLGLEMLAK2	5990.98	2764.7	
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	TNTFCGTPDYIAPEILLGQK	TNTFC(UniMod:4)GTPDYIAPEILLGQK	3	TNTFC(UniMod:4)GTPDYIAPEILLGQK3	2121.88	7864.37	7247.74
A0A8I6AGL0	A0A8I6AGL0	A0A8I6AGL0_RAT	Ankrd44	Ankyrin repeat domain 44	1	TNTGFEESDGGALK	TNTGFEESDGGALK	2	TNTGFEESDGGALK2	1715.34	1307.56	
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	TNTGQALQYLSEHSFSPSQGDR	TNTGQALQYLSEHSFSPSQGDR	3	TNTGQALQYLSEHSFSPSQGDR3	1.74027e+06	1.94803e+06	2.01664e+06
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	TNTGQALQYLSEHSFSPSQGDR	TNTGQALQYLSEHSFSPSQGDR	4	TNTGQALQYLSEHSFSPSQGDR4	42512	43626.3	37699
Q5PQX0	Q5PQX0	UXS1_RAT	Uxs1	UDP-glucuronic acid decarboxylase 1	1	TNTIGTLNMLGLAK	TNTIGTLNMLGLAK	2	TNTIGTLNMLGLAK2	62305.5	36349.5	61826.9
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	TNTISYK	TNTISYK	2	TNTISYK2	29760.4	30994	29215.4
A0A8I6A1D9	A0A8I6A1D9	A0A8I6A1D9_RAT	Use1	Vesicle transport protein USE1	1	TNTLAAQSVIK	TNTLAAQSVIK	2	TNTLAAQSVIK2	18303.5	12883.3	16111.4
D3ZH14	D3ZH14	D3ZH14_RAT	Tmcc1	Transmembrane and coiled-coil domain family 1	1	TNTLDMQSSGFDALLHEVQEIR	TNTLDMQSSGFDALLHEVQEIR	3	TNTLDMQSSGFDALLHEVQEIR3		7719.96	9417.82
A0A8I6A0N6	A0A8I6A0N6	A0A8I6A0N6_RAT	Dop1a	DOP1 leucine zipper like protein A	1	TNTLLEK	TNTLLEK	2	TNTLLEK2		3016.53	
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TNTNVNCPIECFMPLDVQADR	TNTNVNC(UniMod:4)PIEC(UniMod:4)FMPLDVQADR	3	TNTNVNC(UniMod:4)PIEC(UniMod:4)FMPLDVQADR3	470422	464933	520326
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TNTNVNCPIECFMPLDVQADRDDSRE	TNTNVNC(UniMod:4)PIEC(UniMod:4)FMPLDVQADRDDSRE	4	TNTNVNC(UniMod:4)PIEC(UniMod:4)FMPLDVQADRDDSRE4	1.21126e+06	1.28103e+06	1.40249e+06
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	TNTQPFDLQVYHPSR	TNTQPFDLQVYHPSR	2	TNTQPFDLQVYHPSR2	23663.2	22109.4	25920.3
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	TNTQPFDLQVYHPSR	TNTQPFDLQVYHPSR	3	TNTQPFDLQVYHPSR3	529278	677440	593734
Q5I0C3	Q5I0C3	MCCA_RAT	Mccc1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	1	TNVDFLLR	TNVDFLLR	2	TNVDFLLR2	30127.5	34869.9	35954
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	TNVIQLR	TNVIQLR	1	TNVIQLR1	17084.1		15514.8
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	TNVIQLR	TNVIQLR	2	TNVIQLR2	2.42895e+07	2.71404e+07	2.68776e+07
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	TNVIQSLLAR	TNVIQSLLAR	2	TNVIQSLLAR2	596704	540957	636291
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	TNVLGHLQQGGAPTPFDR	TNVLGHLQQGGAPTPFDR	3	TNVLGHLQQGGAPTPFDR3	32637	26765.4	23310.9
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	TNVLYELAQYASEPSEQEHLHK	TNVLYELAQYASEPSEQEHLHK	3	TNVLYELAQYASEPSEQEHLHK3	11440.1	10936.6	11075.3
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	TNVLYELAQYASEPSEQEHLHK	TNVLYELAQYASEPSEQEHLHK	4	TNVLYELAQYASEPSEQEHLHK4	35429.2	53645.5	21597.5
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	TNVPDIR	TNVPDIR	2	TNVPDIR2	191709	212547	178882
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	TNVPSWCDR	TNVPSWC(UniMod:4)DR	2	TNVPSWC(UniMod:4)DR2	18723.9	23701	12265.3
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	TNVSGGAIALGHPLGGSGSR	TNVSGGAIALGHPLGGSGSR	2	TNVSGGAIALGHPLGGSGSR2	5804.13	8925.66	3497.42
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	TNVSGGAIALGHPLGGSGSR	TNVSGGAIALGHPLGGSGSR	3	TNVSGGAIALGHPLGGSGSR3	173702	135179	199992
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	TNVYEGLLSVGGPNEGK	TNVYEGLLSVGGPNEGK	2	TNVYEGLLSVGGPNEGK2	17665.1	24580.4	
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	TNWQIFR	TNWQIFR	2	TNWQIFR2	7.85034e+06	1.01272e+07	9.03965e+06
M0RCL7	M0RCL7	M0RCL7_RAT	ENSRNOG00000069838	Ig-like domain-containing protein	1	TNYAPSIK	TNYAPSIK	2	TNYAPSIK2	392249		387540
M0RCL7	M0RCL7	M0RCL7_RAT	ENSRNOG00000069838	Ig-like domain-containing protein	1	TNYAPSIKDR	TNYAPSIKDR	3	TNYAPSIKDR3	12047.2	10583.9	19597
A0A8I6A8M8	A0A8I6A8M8	A0A8I6A8M8_RAT	ENSRNOG00000071152	Ig-like domain-containing protein	1	TNYAPSLK	TNYAPSLK	1	TNYAPSLK1	6472.74	3182.98	7965.69
A0A8I6A8M8	A0A8I6A8M8	A0A8I6A8M8_RAT	ENSRNOG00000071152	Ig-like domain-containing protein	1	TNYAPSLK	TNYAPSLK	2	TNYAPSLK2		665209	
M0R7Q2	M0R7Q2	M0R7Q2_RAT	ENSRNOG00000065283	Ig-like domain-containing protein	1	TNYAPSMK	TNYAPSMK	2	TNYAPSMK2	22562.2	18328.2	13879.8
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	TNYIGHK	TNYIGHK	1	TNYIGHK1	245065		212685
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	TNYIGHK	TNYIGHK	2	TNYIGHK2	2.38786e+06		3.26972e+06
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	TNYIGHKTK	TNYIGHKTK	2	TNYIGHKTK2			5383.99
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	TNYLELDR	TNYLELDR	2	TNYLELDR2	5650.05	9555.72	28924.9
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	TNYLELDRK	TNYLELDRK	2	TNYLELDRK2	7873.23		
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	TNYLELDRK	TNYLELDRK	3	TNYLELDRK3	13878	18173.9	15780.7
P62425	P62425;D3ZU22;A0A0G2K6A5;Q7TQ86;D3ZPL5;F1M2Q3;A0A8I5ZPC7	RL7A_RAT	Rpl7a	Large ribosomal subunit protein eL8	0	TNYNDRYDEIR	TNYNDRYDEIR	3	TNYNDRYDEIR3	41444.8	34083.4	26670.2
P62425	P62425;D3ZU22;A0A0G2K6A5;Q7TQ86;D3ZPL5;F1M2Q3	RL7A_RAT	Rpl7a	Large ribosomal subunit protein eL8	0	TNYNDRYDEIRR	TNYNDRYDEIRR	3	TNYNDRYDEIRR3	1355.78	5724.56	
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	TNYTSVLTNVGAALHGFHDVMK	TNYTSVLTNVGAALHGFHDVMK	4	TNYTSVLTNVGAALHGFHDVMK4			9134.96
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	TNYYLCK	TNYYLC(UniMod:4)K	1	TNYYLC(UniMod:4)K1	20346.4	16649	22540.6
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	TNYYLCK	TNYYLC(UniMod:4)K	2	TNYYLC(UniMod:4)K2	929141	954800	1.02226e+06
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	TPAAVLPTPVAVSQPIR	TPAAVLPTPVAVSQPIR	2	TPAAVLPTPVAVSQPIR2	35796.9	55944.4	23081.9
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	TPAAVLPTPVAVSQPIR	TPAAVLPTPVAVSQPIR	3	TPAAVLPTPVAVSQPIR3	4504.62	9622.33	3896.44
Q9EST6	Q9EST6	AN32B_RAT	Anp32b	Acidic leucine-rich nuclear phosphoprotein 32 family member B	1	TPAAVQELVLDNCK	TPAAVQELVLDNC(UniMod:4)K	2	TPAAVQELVLDNC(UniMod:4)K2	18162.1	13053.9	15001.8
Q9EST6	Q9EST6	AN32B_RAT	Anp32b	Acidic leucine-rich nuclear phosphoprotein 32 family member B	1	TPAAVQELVLDNCK	TPAAVQELVLDNC(UniMod:4)K	3	TPAAVQELVLDNC(UniMod:4)K3	5506.53	10725.5	6404.42
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	TPADCPVIAIDSFR	TPADC(UniMod:4)PVIAIDSFR	2	TPADC(UniMod:4)PVIAIDSFR2	193654	193592	202630
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	TPADCPVIAIDSFR	TPADC(UniMod:4)PVIAIDSFR	3	TPADC(UniMod:4)PVIAIDSFR3	48980.3	48112.7	44452.4
B5DEN5	B5DEN5;F7EM91	B5DEN5_RAT	Eef1b2	Elongation factor 1-beta	0	TPAGLQVLNDYLADK	TPAGLQVLNDYLADK	2	TPAGLQVLNDYLADK2	801619	771563	815461
B5DEN5	B5DEN5;F7EM91	B5DEN5_RAT	Eef1b2	Elongation factor 1-beta	0	TPAGLQVLNDYLADK	TPAGLQVLNDYLADK	3	TPAGLQVLNDYLADK3	48392.4	53838.8	76920.8
Q80Z29	Q80Z29	NAMPT_RAT	Nampt	Nicotinamide phosphoribosyltransferase	1	TPAGTFVTLEEGK	TPAGTFVTLEEGK	2	TPAGTFVTLEEGK2	4579.8	3820.46	5349.62
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	TPAILEASAGAIQNLCAGR	TPAILEASAGAIQNLC(UniMod:4)AGR	2	TPAILEASAGAIQNLC(UniMod:4)AGR2	6522.09	3386.06	7924.44
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TPALNFK	TPALNFK	1	TPALNFK1	28914.6	31057.8	14462.8
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TPALNFK	TPALNFK	2	TPALNFK2	1.99778e+06	3.03391e+06	2.99502e+06
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	TPALVFEHVNNTDFK	TPALVFEHVNNTDFK	2	TPALVFEHVNNTDFK2	6528.7	2788.79	1805.34
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	TPALVFEHVNNTDFK	TPALVFEHVNNTDFK	3	TPALVFEHVNNTDFK3	34823.4	36136.1	29129.4
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	TPANFPDAGLEMNYCR	TPANFPDAGLEMNYC(UniMod:4)R	2	TPANFPDAGLEMNYC(UniMod:4)R2	717583	653192	616456
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	TPANFPDAGLEMNYCR	TPANFPDAGLEMNYC(UniMod:4)R	3	TPANFPDAGLEMNYC(UniMod:4)R3	239823	253732	204629
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	TPAPEGPR	TPAPEGPR	2	TPAPEGPR2	15045.3	14585.2	
D4A0T0	D4A0T0	D4A0T0_RAT	Ndufb10	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10	1	TPAPSPQTSIPNPITYLTK	TPAPSPQTSIPNPITYLTK	3	TPAPSPQTSIPNPITYLTK3	7991.68	10606.5	10994.3
P07150	P07150	ANXA1_RAT	Anxa1	Annexin A1	1	TPAQFDADELR	TPAQFDADELR	2	TPAQFDADELR2	12712.1	11179.6	5665.23
Q07936	Q07936	ANXA2_RAT	Anxa2	Annexin A2	1	TPAQYDASELK	TPAQYDASELK	2	TPAQYDASELK2	22443.6	24121.6	17654.7
P58751	P58751	RELN_RAT	Reln	Reelin	1	TPATAFR	TPATAFR	2	TPATAFR2	302719	377640	383124
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	TPATEHPNMAR	TPATEHPNMAR	3	TPATEHPNMAR3		5452.89	10818.9
P08541	P08542;F1M3E3;P08541	UD2B2_RAT	Ugt2b	UDP-glucuronosyltransferase 2B2	0	TPATLGPNTR	TPATLGPNTR	2	TPATLGPNTR2	15216.1	16848.8	15908.4
O70601	O70601	LAT_RAT	Lat	Linker for activation of T-cells family member 1	1	TPATSYPLVTSFPPLR	TPATSYPLVTSFPPLR	2	TPATSYPLVTSFPPLR2	35336.2	38758.1	34747
O70601	O70601	LAT_RAT	Lat	Linker for activation of T-cells family member 1	1	TPATSYPLVTSFPPLR	TPATSYPLVTSFPPLR	3	TPATSYPLVTSFPPLR3	19684.4	13984.7	20946.5
P70473	P70473	AMACR_RAT	Amacr	Alpha-methylacyl-CoA racemase	1	TPAVPSAK	TPAVPSAK	2	TPAVPSAK2	19554.8	14304.4	11079.5
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	TPCEEILVK	TPC(UniMod:4)EEILVK	2	TPC(UniMod:4)EEILVK2	6.50731e+06	6.95065e+06	7.46505e+06
Q9ESC1	Q9ESC1	AGRL4_RAT	Adgrl4	Adhesion G protein-coupled receptor L4	1	TPCLPNAK	TPC(UniMod:4)LPNAK	2	TPC(UniMod:4)LPNAK2	138416	204692	119253
Q8CJ11	Q8CJ11	AGRG2_RAT	Adgrg2	Adhesion G-protein coupled receptor G2	1	TPCPSSPEELEK	TPC(UniMod:4)PSSPEELEK	2	TPC(UniMod:4)PSSPEELEK2	27949.5	20185.4	12532.5
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	TPCSPLSGSLAPLNMK	TPC(UniMod:4)SPLSGSLAPLNMK	2	TPC(UniMod:4)SPLSGSLAPLNMK2	42982.5	46349.3	44282.7
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	TPCSPLSGSLAPLNMK	TPC(UniMod:4)SPLSGSLAPLNMK	3	TPC(UniMod:4)SPLSGSLAPLNMK3	3932.55		3748.05
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	TPCVGDK	TPC(UniMod:4)VGDK	2	TPC(UniMod:4)VGDK2	28810.9	27627.8	24668.9
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	TPCVGDKDSSPGVR	TPC(UniMod:4)VGDKDSSPGVR	2	TPC(UniMod:4)VGDKDSSPGVR2	5415.34	4738.3	2622.13
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	TPCVGDKDSSPGVR	TPC(UniMod:4)VGDKDSSPGVR	3	TPC(UniMod:4)VGDKDSSPGVR3	80828.9	129752	120965
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	TPDASPEPK	TPDASPEPK	1	TPDASPEPK1	5230.78	594.754	
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	TPDASPEPK	TPDASPEPK	2	TPDASPEPK2	150243	191385	218579
A0A8J8YGQ6	A0A8J8YGQ6	A0A8J8YGQ6_RAT	Dhrsx	Dehydrogenase/reductase X-linked	1	TPDEGAWTSVYAAASPK	TPDEGAWTSVYAAASPK	2	TPDEGAWTSVYAAASPK2	2882.72	4228.16	3021.98
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	TPDFESTGLYSAMPR	TPDFESTGLYSAMPR	2	TPDFESTGLYSAMPR2	45697.8	31923.7	49255.4
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	TPDFESTGLYSAMPR	TPDFESTGLYSAMPR	3	TPDFESTGLYSAMPR3	18863.3	21021.5	24182.3
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	TPDGQGLSTYK	TPDGQGLSTYK	2	TPDGQGLSTYK2	4942.04	9597.33	6372.51
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	TPDLDVPK	TPDLDVPK	2	TPDLDVPK2	168096	152965	123711
A0A8J8YNE4	A0A8J8YNE4	A0A8J8YNE4_RAT	Apool	MICOS complex subunit	1	TPDLEHSVFLLK	TPDLEHSVFLLK	2	TPDLEHSVFLLK2	2511.33	3961.36	
A0A8J8YNE4	A0A8J8YNE4	A0A8J8YNE4_RAT	Apool	MICOS complex subunit	1	TPDLEHSVFLLK	TPDLEHSVFLLK	3	TPDLEHSVFLLK3	37141.3	29827.4	52101.4
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	TPDLYEK	TPDLYEK	2	TPDLYEK2	95289.1	82282.3	97883.2
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	TPDSVIIDSLGQEER	TPDSVIIDSLGQEER	2	TPDSVIIDSLGQEER2	76249	63948.2	74964.5
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	TPDSVIIDSLGQEER	TPDSVIIDSLGQEER	3	TPDSVIIDSLGQEER3	18485.5	17038.7	22385.4
A0A0G2JZC4	A0A0G2JZC4	A0A0G2JZC4_RAT	Sema6d	Semaphorin 6D	1	TPDSVWTAVPEDK	TPDSVWTAVPEDK	2	TPDSVWTAVPEDK2	13726.7	8348.81	12427.1
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	TPDTIRR	TPDTIRR	2	TPDTIRR2			17847.6
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	TPDTSLLASHMLAR	TPDTSLLASHMLAR	3	TPDTSLLASHMLAR3	6407.27	5722.24	5380.23
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	TPDVLKK	TPDVLKK	2	TPDVLKK2	11592.5		
A0A8I6GBD2	A0A8I6GBD2	A0A8I6GBD2_RAT	Actr10	Actin related protein 10	1	TPDWCSLNNPPLEMMFDVGK	TPDWC(UniMod:4)SLNNPPLEMMFDVGK	3	TPDWC(UniMod:4)SLNNPPLEMMFDVGK3	13237.1	8443.93	5144.75
Q6AYY8	Q6AYY8	ACATN_RAT	Slc33a1	Acetyl-coenzyme A transporter 1	1	TPEAIELCK	TPEAIELC(UniMod:4)K	2	TPEAIELC(UniMod:4)K2	28008.1	13557.6	10633
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	TPEDFVFPLLPNEELR	TPEDFVFPLLPNEELR	3	TPEDFVFPLLPNEELR3	2327.67	8224.87	10483.3
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	TPEDFVFPLLPNEELRDK	TPEDFVFPLLPNEELRDK	3	TPEDFVFPLLPNEELRDK3	17771.7	19880	21977.4
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	TPEDGGYSCEITEK	TPEDGGYSC(UniMod:4)EITEK	2	TPEDGGYSC(UniMod:4)EITEK2	3688.12	4872.79	9127.88
F7FPK8	F7FPK8	F7FPK8_RAT	Lman2	Lectin, mannose-binding 2	1	TPEEESIDWTK	TPEEESIDWTK	2	TPEEESIDWTK2	41705.3	38251.6	16828.5
P10959	P10959	EST1C_RAT	Ces1c	Carboxylesterase 1C	1	TPEEILTEK	TPEEILTEK	2	TPEEILTEK2	133679	137077	117666
Q6PEC4	Q6PEC4	SKP1_RAT	Skp1	S-phase kinase-associated protein 1	1	TPEEIRK	TPEEIRK	2	TPEEIRK2			12157.2
Q62881	Q62881	NOL3_RAT	Nol3	Nucleolar protein 3	1	TPEEPELEAEATK	TPEEPELEAEATK	2	TPEEPELEAEATK2	773.002		3633.04
O08557	O08557	DDAH1_RAT	Ddah1	N(G),N(G)-dimethylarginine dimethylaminohydrolase 1	1	TPEEYPESAK	TPEEYPESAK	2	TPEEYPESAK2	4072.31	4585.59	5913.99
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	TPEFEEFNGK	TPEFEEFNGK	2	TPEFEEFNGK2	4461.42	8091.11	4460.63
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	TPEFEEFNGKPDSLFFTDGQR	TPEFEEFNGKPDSLFFTDGQR	3	TPEFEEFNGKPDSLFFTDGQR3	29683.6	32667.2	41092.5
Q68FR6	A0A8I6AKG3;Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	0	TPEFLRK	TPEFLRK	2	TPEFLRK2	9652.71	13520.7	6907.19
D3ZAE6	D3ZAE6	D3ZAE6_RAT	Vasn	Vasorin	1	TPEGEEACGEANTPQAVR	TPEGEEAC(UniMod:4)GEANTPQAVR	2	TPEGEEAC(UniMod:4)GEANTPQAVR2	2103.72		
D3ZAE6	D3ZAE6	D3ZAE6_RAT	Vasn	Vasorin	1	TPEGEEACGEANTPQAVR	TPEGEEAC(UniMod:4)GEANTPQAVR	3	TPEGEEAC(UniMod:4)GEANTPQAVR3	5283.2		5020.76
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	TPEIPMTEAVEAVAMVGDR	TPEIPMTEAVEAVAMVGDR	3	TPEIPMTEAVEAVAMVGDR3	19953.7	10491.5	17221.6
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	TPEIVDLYSNFPIGEK	TPEIVDLYSNFPIGEK	2	TPEIVDLYSNFPIGEK2	10882.9	11355.9	9987.67
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	TPEIVDLYSNFPIGEK	TPEIVDLYSNFPIGEK	3	TPEIVDLYSNFPIGEK3	3196.11	6411.96	3987.96
O08874	O08874	PKN2_RAT	Pkn2	Serine/threonine-protein kinase N2	1	TPELAPPASDSTVTK	TPELAPPASDSTVTK	2	TPELAPPASDSTVTK2	21101.3	23290.6	22747.6
B5DFN2	D3ZWL6;B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	0	TPELTWER	TPELTWER	2	TPELTWER2	176823	171954	198024
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	TPENFPCK	TPENFPC(UniMod:4)K	2	TPENFPC(UniMod:4)K2	1.7636e+06	1.28182e+06	1.30693e+06
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	TPEQCPSVVSLLSESYNPHVR	TPEQC(UniMod:4)PSVVSLLSESYNPHVR	3	TPEQC(UniMod:4)PSVVSLLSESYNPHVR3	46622.9	48577.9	61994.9
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	TPEQCPSVVSLLSESYNPHVR	TPEQC(UniMod:4)PSVVSLLSESYNPHVR	4	TPEQC(UniMod:4)PSVVSLLSESYNPHVR4	3010.17		3266.12
A0A8I6ACU9	A0A8I6ACU9	A0A8I6ACU9_RAT	Timm50	Mitochondrial import inner membrane translocase subunit TIM50	1	TPEQVTEIANR	TPEQVTEIANR	2	TPEQVTEIANR2	33194.7	29348.7	32650
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	TPESEAPDIESR	TPESEAPDIESR	2	TPESEAPDIESR2	6329.34	1761.85	5174.77
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	TPESEAPDIESREDLIK	TPESEAPDIESREDLIK	3	TPESEAPDIESREDLIK3	9540.5	6439.86	7244.46
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	TPESFVLADMPIR	TPESFVLADMPIR	2	TPESFVLADMPIR2	149653	184025	146832
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	TPESFVLADMPIR	TPESFVLADMPIR	3	TPESFVLADMPIR3	35167.4	45509.8	38610.1
P55280	P55280	CADH6_RAT	Cdh6	Cadherin-6	1	TPESSPPGTPIGR	TPESSPPGTPIGR	2	TPESSPPGTPIGR2	21781.5	17512.5	13045.5
Q5PQX1	Q5PQX1	TOIP1_RAT	Tor1aip1	Torsin-1A-interacting protein 1	1	TPETSVMSEDPISNLCRPPLR	TPETSVMSEDPISNLC(UniMod:4)RPPLR	3	TPETSVMSEDPISNLC(UniMod:4)RPPLR3		7575.7	9148.52
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	TPEVSGYTYEK	TPEVSGYTYEK	2	TPEVSGYTYEK2	16303.8	8777.78	10364.8
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	TPEYLHIDQR	TPEYLHIDQR	2	TPEYLHIDQR2	2260.49	8501.06	7125.53
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	TPEYLHIDQR	TPEYLHIDQR	3	TPEYLHIDQR3	63386.4	69208.5	73253.7
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	TPFCFVINALSQR	TPFC(UniMod:4)FVINALSQR	2	TPFC(UniMod:4)FVINALSQR2	40516.6	31872	25279.6
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	TPFCFVINALSQR	TPFC(UniMod:4)FVINALSQR	3	TPFC(UniMod:4)FVINALSQR3	16699.1	16719.2	24320.6
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	TPFGAYGGLLK	TPFGAYGGLLK	2	TPFGAYGGLLK2	33663.5	21369	32598.6
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	TPFIDMFNSVPLR	TPFIDMFNSVPLR	2	TPFIDMFNSVPLR2	12914	11957.8	15923
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	TPFLGDMAHIR	TPFLGDMAHIR	2	TPFLGDMAHIR2	11882.1	5267.65	8004.73
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	TPFLGDMAHIR	TPFLGDMAHIR	3	TPFLGDMAHIR3	56971.5	61594.9	67928.9
Q8CFN2	Q8CFN2	CDC42_RAT	Cdc42	Cell division control protein 42 homolog	1	TPFLLVGTQIDLR	TPFLLVGTQIDLR	2	TPFLLVGTQIDLR2	247331	186811	191845
Q8CFN2	Q8CFN2	CDC42_RAT	Cdc42	Cell division control protein 42 homolog	1	TPFLLVGTQIDLR	TPFLLVGTQIDLR	3	TPFLLVGTQIDLR3	8047.13	8127.71	7053.5
Q8CFN2	Q8CFN2	CDC42_RAT	Cdc42	Cell division control protein 42 homolog	1	TPFLLVGTQIDLRDDPSTIEK	TPFLLVGTQIDLRDDPSTIEK	3	TPFLLVGTQIDLRDDPSTIEK3	94673.5	75310.5	125928
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	TPFSSIK	TPFSSIK	2	TPFSSIK2	347691	355628	302183
Q6AYQ9	Q6AYQ9	Q6AYQ9_RAT	Ppic	Peptidyl-prolyl cis-trans isomerase	1	TPFVVEVPDW	TPFVVEVPDW	2	TPFVVEVPDW2	68059.2	75143.4	79000.7
M0RBE8	M0RBE8	M0RBE8_RAT	Was	Wiskott-Aldrich syndrome	1	TPGAMENSVPQALPQQSEGLVGALMHVMQK	TPGAMENSVPQALPQQSEGLVGALMHVMQK	4	TPGAMENSVPQALPQQSEGLVGALMHVMQK4	42883.1	43204.8	54130
Q9QZN9	Q9QZN9	CNR2_RAT	Cnr2	Cannabinoid receptor 2	1	TPGCSNC	TPGC(UniMod:4)SNC(UniMod:4)	1	TPGC(UniMod:4)SNC(UniMod:4)1			6280.72
Q63068	Q63068	PHAX_RAT	Phax	Phosphorylated adapter RNA export protein	1	TPGGVFLNLLK	TPGGVFLNLLK	2	TPGGVFLNLLK2	1625.16		1493.62
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	TPGIYLLIFDNTFSR	TPGIYLLIFDNTFSR	2	TPGIYLLIFDNTFSR2	14277.2	14443.1	11697.1
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	TPGIYLLIFDNTFSR	TPGIYLLIFDNTFSR	3	TPGIYLLIFDNTFSR3	2328.33	2782.76	
P21643	P21643	T23O_RAT	Tdo2	Tryptophan 2,3-dioxygenase	1	TPGLEPHGFNFWGK	TPGLEPHGFNFWGK	3	TPGLEPHGFNFWGK3	7906.16		12422.7
Q5RKI6	Q5RKI6	EIF1A_RAT	Eif1ad	Probable RNA-binding protein EIF1AD	1	TPGNNLHEVETAQGQR	TPGNNLHEVETAQGQR	3	TPGNNLHEVETAQGQR3	5678.7	2011.41	6408.69
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	TPGNPVNSAR	TPGNPVNSAR	2	TPGNPVNSAR2	42411.9	41167.8	43474.7
P13471	P13471	RS14_RAT	Rps14	Small ribosomal subunit protein uS11	1	TPGPGAQSALR	TPGPGAQSALR	2	TPGPGAQSALR2	35012.5	30225.3	32303.1
A0A8I6ALR3	A0A8I6ALR3	A0A8I6ALR3_RAT	Sh2d1b2	Uncharacterized LOC102556681	1	TPGQGMVVHLSNPIMR	TPGQGMVVHLSNPIMR	3	TPGQGMVVHLSNPIMR3	21311.7	24297.8	22753.9
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	TPGSGSSLLDLEAGLCVTPSSESSSR	TPGSGSSLLDLEAGLC(UniMod:4)VTPSSESSSR	3	TPGSGSSLLDLEAGLC(UniMod:4)VTPSSESSSR3	16116.1	17948.2	16858.3
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	TPGVVENHGFFLNPSR	TPGVVENHGFFLNPSR	2	TPGVVENHGFFLNPSR2		4279.83	
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	TPGVVENHGFFLNPSR	TPGVVENHGFFLNPSR	3	TPGVVENHGFFLNPSR3	51346.9	68682.5	64886.6
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	TPGYVTTPHTMDLLK	TPGYVTTPHTMDLLK	3	TPGYVTTPHTMDLLK3	14683.2	26124.6	13221.5
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	TPHLYSHSILGLLER	TPHLYSHSILGLLER	3	TPHLYSHSILGLLER3	7033.17	8271.59	4882.13
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	TPHLYSHSILGLLER	TPHLYSHSILGLLER	4	TPHLYSHSILGLLER4	14499.3	19256.3	13967
B2GV97	B2GV97	B2GV97_RAT	Sepsecs	O-phosphoseryl-tRNA(Sec) selenium transferase	1	TPHNPISLAMTLETLDGHQDR	TPHNPISLAMTLETLDGHQDR	4	TPHNPISLAMTLETLDGHQDR4	2856.29	4613.44	6005.52
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	TPHTATLR	TPHTATLR	2	TPHTATLR2	32562.4	16334.2	18900.5
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	TPHVLVLGSGVYR	TPHVLVLGSGVYR	2	TPHVLVLGSGVYR2	4932.85	6158.82	5326.71
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	TPHVLVLGSGVYR	TPHVLVLGSGVYR	3	TPHVLVLGSGVYR3	16652.5	16871.9	17056
A0A8I5ZQE4	A0A8I5ZQE4	A0A8I5ZQE4_RAT	Supt5h	Transcription elongation factor SPT5	1	TPHYGSQTPLHDGSR	TPHYGSQTPLHDGSR	3	TPHYGSQTPLHDGSR3	1718.27	2038.04	2581.2
A0A8I5ZQE4	A0A8I5ZQE4	A0A8I5ZQE4_RAT	Supt5h	Transcription elongation factor SPT5	1	TPHYGSQTPLHDGSR	TPHYGSQTPLHDGSR	4	TPHYGSQTPLHDGSR4	14865.2	9282.31	3819.57
Q99NA5	Q99NA5	IDH3A_RAT	Idh3a	Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial	1	TPIAAGHPSMNLLLR	TPIAAGHPSMNLLLR	2	TPIAAGHPSMNLLLR2	6730.86	5515.51	
Q99NA5	Q99NA5	IDH3A_RAT	Idh3a	Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial	1	TPIAAGHPSMNLLLR	TPIAAGHPSMNLLLR	3	TPIAAGHPSMNLLLR3	247859	294286	291599
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	TPIALATGIR	TPIALATGIR	2	TPIALATGIR2		3760.17	4119.69
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	TPIALATGIRPFPTEESVNDEDIYK	TPIALATGIRPFPTEESVNDEDIYK	3	TPIALATGIRPFPTEESVNDEDIYK3	65388	75921.6	74708.3
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	TPIALATGIRPFPTEESVNDEDIYK	TPIALATGIRPFPTEESVNDEDIYK	4	TPIALATGIRPFPTEESVNDEDIYK4	26988.8	25619.5	24865.5
Q9Z272	Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	1	TPIDYAR	TPIDYAR	2	TPIDYAR2	32563.5	31735.2	42550.4
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	TPIESLFIEATER	TPIESLFIEATER	2	TPIESLFIEATER2	20091.1	32842.7	34529.3
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	TPIESLFIEATER	TPIESLFIEATER	3	TPIESLFIEATER3	13562.5	10931.2	16594.1
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	TPIGSFLGSLASQPATK	TPIGSFLGSLASQPATK	2	TPIGSFLGSLASQPATK2	89026.1	88687.5	87131.8
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	TPIGSFLGSLASQPATK	TPIGSFLGSLASQPATK	3	TPIGSFLGSLASQPATK3	357118	361843	426690
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	TPIIGACGSQEQVLLMDLPGSSCR	TPIIGAC(UniMod:4)GSQEQVLLMDLPGSSC(UniMod:4)R	3	TPIIGAC(UniMod:4)GSQEQVLLMDLPGSSC(UniMod:4)R3	8524.48	7292.3	13091.1
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	TPIKDAATGAVK	TPIKDAATGAVK	3	TPIKDAATGAVK3	3052.16	9754.55	13077.5
P29266	P29266	3HIDH_RAT	Hibadh	3-hydroxyisobutyrate dehydrogenase, mitochondrial	1	TPILLGSVAHQIYR	TPILLGSVAHQIYR	2	TPILLGSVAHQIYR2	3461.72		2516.49
P29266	P29266	3HIDH_RAT	Hibadh	3-hydroxyisobutyrate dehydrogenase, mitochondrial	1	TPILLGSVAHQIYR	TPILLGSVAHQIYR	3	TPILLGSVAHQIYR3	36624.9	43956.3	40990.3
P16636	P16636	LYOX_RAT	Lox	Protein-lysine 6-oxidase	1	TPILLLR	TPILLLR	2	TPILLLR2	30521.3	23378.7	26697.3
A0A8I6ATH0	A0A8I6ATH0	A0A8I6ATH0_RAT	Braf	non-specific serine/threonine protein kinase	1	TPIQAGGYGEFAAFK	TPIQAGGYGEFAAFK	2	TPIQAGGYGEFAAFK2	10729	19204.6	13665
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	TPIQPMLDSSIR	TPIQPMLDSSIR	2	TPIQPMLDSSIR2	21690.4	20402.4	29034.8
Q3SWU0	Q3SWU0	TRBP2_RAT	Tarbp2	RISC-loading complex subunit TARBP2	1	TPISLLQEYGTR	TPISLLQEYGTR	2	TPISLLQEYGTR2			4192.98
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	TPITFRENVAPACLPQK	TPITFRENVAPAC(UniMod:4)LPQK	3	TPITFRENVAPAC(UniMod:4)LPQK3	28519.6	28176.3	31320.7
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	TPITVVR	TPITVVR	2	TPITVVR2	3.97525e+06	3.69796e+06	3.75515e+06
P97535	P97535	PLA1A_RAT	Pla1a	Phospholipase A1 member A	1	TPIVGTFCTAPLPVNDSK	TPIVGTFC(UniMod:4)TAPLPVNDSK	2	TPIVGTFC(UniMod:4)TAPLPVNDSK2	36571.2	34984.9	27929
P97535	P97535	PLA1A_RAT	Pla1a	Phospholipase A1 member A	1	TPIVGTFCTAPLPVNDSK	TPIVGTFC(UniMod:4)TAPLPVNDSK	3	TPIVGTFC(UniMod:4)TAPLPVNDSK3	24899.7	22065.2	25431.8
P97535	P97535	PLA1A_RAT	Pla1a	Phospholipase A1 member A	1	TPIVGTFCTAPLPVNDSKK	TPIVGTFC(UniMod:4)TAPLPVNDSKK	3	TPIVGTFC(UniMod:4)TAPLPVNDSKK3	11435.8	21127.4	25599.1
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	TPLALPSEEPQEAPK	TPLALPSEEPQEAPK	2	TPLALPSEEPQEAPK2	54965.4	61854.5	72185.4
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	TPLAPLAPSLGKPSR	TPLAPLAPSLGKPSR	3	TPLAPLAPSLGKPSR3	14911.4	8722.39	24895.2
D4AD75	D4AD75	D4AD75_RAT	Dpy19l1	Dpy-19 like C-mannosyltransferase 1	1	TPLCNILVK	TPLC(UniMod:4)NILVK	2	TPLC(UniMod:4)NILVK2	18250.6	10423.2	26867.5
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	TPLDADQTCVELIR	TPLDADQTC(UniMod:4)VELIR	2	TPLDADQTC(UniMod:4)VELIR2		3732.96	
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	TPLDLAAFK	TPLDLAAFK	2	TPLDLAAFK2	32076	38795.4	24141.3
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	TPLEDPNR	TPLEDPNR	2	TPLEDPNR2	4533.09		1728.76
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	TPLEDPNRR	TPLEDPNRR	2	TPLEDPNRR2	3343.99		
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	TPLGASLDEQSSVGPK	TPLGASLDEQSSVGPK	2	TPLGASLDEQSSVGPK2	4633.35	3171.76	
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	TPLGGIHISQTK	TPLGGIHISQTK	3	TPLGGIHISQTK3	38555.6	49511.9	44978
Q9JIA3	Q9JIA3	IKBB_RAT	Nfkbib	NF-kappa-B inhibitor beta	1	TPLGSALLRPNPVLAR	TPLGSALLRPNPVLAR	3	TPLGSALLRPNPVLAR3	48480.2	42302.5	49453.6
A0A8I6ABZ7	A0A8I6ABZ7	A0A8I6ABZ7_RAT	Dhx9	RNA helicase	1	TPLHEIALSIK	TPLHEIALSIK	3	TPLHEIALSIK3	3704.56	2602.15	1902.73
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	TPLHLAANNGILDVVR	TPLHLAANNGILDVVR	3	TPLHLAANNGILDVVR3	11886.6	5511.18	4336.13
Q5U2Z4	Q5U2Z4	Q5U2Z4_RAT	Nfkb2	Nuclear factor kappa B subunit 2	1	TPLHLATEMEELGLVTHLVTK	TPLHLATEMEELGLVTHLVTK	4	TPLHLATEMEELGLVTHLVTK4	545.101	2165.7	860.847
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	TPLHLSIMAR	TPLHLSIMAR	2	TPLHLSIMAR2	4826.09	2599.6	3004.88
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	TPLHMTALHGR	TPLHMTALHGR	3	TPLHMTALHGR3	6649.89		
Q6WRH9	Q6WRH9	IGS10_RAT	Igsf10	Immunoglobulin superfamily member 10	1	TPLHQIFVNNQK	TPLHQIFVNNQK	3	TPLHQIFVNNQK3	2448.93	2493.59	3266.44
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	TPLIDLCDGQAEQAAK	TPLIDLC(UniMod:4)DGQAEQAAK	2	TPLIDLC(UniMod:4)DGQAEQAAK2	10948.6	9116.92	6025.49
A0A8I5ZND3	A0A8I5ZND3	A0A8I5ZND3_RAT	Tcirg1	V-type proton ATPase subunit a	1	TPLLSATPGPHADLK	TPLLSATPGPHADLK	3	TPLLSATPGPHADLK3	4688.99		3059.42
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	TPLPIDPR	TPLPIDPR	2	TPLPIDPR2	125133	101842	89952.1
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	TPLPLCPSQPQMDYR	TPLPLC(UniMod:4)PSQPQMDYR	2	TPLPLC(UniMod:4)PSQPQMDYR2	35272.5	45071.5	35063.9
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	TPLPLCPSQPQMDYR	TPLPLC(UniMod:4)PSQPQMDYR	3	TPLPLC(UniMod:4)PSQPQMDYR3	7706.41	13927	8954.83
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	TPLPQIDLDKELQQDPGERPSPER	TPLPQIDLDKELQQDPGERPSPER	3	TPLPQIDLDKELQQDPGERPSPER3	5728.55	4861.85	4082.82
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	TPLPQIDLDKELQQDPGERPSPER	TPLPQIDLDKELQQDPGERPSPER	4	TPLPQIDLDKELQQDPGERPSPER4	52528.7	66307.1	61413.2
O08679	O08679	MARK2_RAT	Mark2	Serine/threonine-protein kinase MARK2	1	TPLPTLNER	TPLPTLNER	2	TPLPTLNER2	21341.8	18806.6	21686.2
Q9WVS2	Q9WVS2	OSGEP_RAT	Osgep	tRNA N6-adenosine threonylcarbamoyltransferase	1	TPLQDSGITQR	TPLQDSGITQR	2	TPLQDSGITQR2	9326.8	3016.39	
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	TPLQHEAPLWMDQLCTGCMK	TPLQHEAPLWMDQLC(UniMod:4)TGC(UniMod:4)MK	3	TPLQHEAPLWMDQLC(UniMod:4)TGC(UniMod:4)MK3	22767	18475.6	14223.8
D3ZAI6	D3ZAI6	D3ZAI6_RAT	Nt5dc3	5'-nucleotidase domain containing 3	1	TPLQHELPAWSDSPSAFK	TPLQHELPAWSDSPSAFK	3	TPLQHELPAWSDSPSAFK3	16475.9	18628.5	13968.8
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	TPLQLDPQQEQQLFR	TPLQLDPQQEQQLFR	2	TPLQLDPQQEQQLFR2	69031.4	72371.9	70388.5
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	TPLQLDPQQEQQLFR	TPLQLDPQQEQQLFR	3	TPLQLDPQQEQQLFR3	26900.3	15445.9	16568.1
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	TPLSALGLKPHNPADILLHPTGEPR	TPLSALGLKPHNPADILLHPTGEPR	4	TPLSALGLKPHNPADILLHPTGEPR4	9922.61	5739.15	10349.7
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	TPLSMQK	TPLSMQK	2	TPLSMQK2	122662	104978	134007
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	TPLSMQKPALAPK	TPLSMQKPALAPK	3	TPLSMQKPALAPK3	73201.6	77753.3	68659.5
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	TPLSMQKPALAPKPASQTPPSSPLSK	TPLSMQKPALAPKPASQTPPSSPLSK	4	TPLSMQKPALAPKPASQTPPSSPLSK4	57728.6	86953.2	84908.1
Q3B7T9	Q3B7T9	RFIP1_RAT	Rab11fip1	Rab11 family-interacting protein 1	1	TPLSQSMSVLPTSKPDK	TPLSQSMSVLPTSKPDK	3	TPLSQSMSVLPTSKPDK3	20152.7	12233.2	14662.8
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	TPLTSADEHSIHSK	TPLTSADEHSIHSK	3	TPLTSADEHSIHSK3	2532	8980.04	4052.93
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	TPLTSADEHSIHSK	TPLTSADEHSIHSK	4	TPLTSADEHSIHSK4	11011.7	12845.7	15664.9
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	TPLVLATQMCR	TPLVLATQMC(UniMod:4)R	2	TPLVLATQMC(UniMod:4)R2	22491.1	17862.2	14182.6
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	TPLVLATQMCRPTICQLLIDR	TPLVLATQMC(UniMod:4)RPTIC(UniMod:4)QLLIDR	3	TPLVLATQMC(UniMod:4)RPTIC(UniMod:4)QLLIDR3	36069.9	33805.1	23724.2
Q4V7C1	Q4V7C1	CEP43_RAT	Cep43	Centrosomal protein 43	1	TPLVNESLK	TPLVNESLK	2	TPLVNESLK2	1290.47	4675.01	
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	TPLVSVLLEGPPHSGK	TPLVSVLLEGPPHSGK	3	TPLVSVLLEGPPHSGK3	37957.3	22352.4	19061.5
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	TPLVTIQSSGSFSQK	TPLVTIQSSGSFSQK	2	TPLVTIQSSGSFSQK2	600171	394678	327778
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	TPLVTIQSSGSFSQK	TPLVTIQSSGSFSQK	3	TPLVTIQSSGSFSQK3	212613	126997	113070
P09875	P09875	UD2B1_RAT	Ugt2b1	UDP-glucuronosyltransferase 2B1	1	TPLVYSLR	TPLVYSLR	2	TPLVYSLR2	17069.8	7022.56	6171.33
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	TPMCAHCNQAIR	TPMC(UniMod:4)AHC(UniMod:4)NQAIR	2	TPMC(UniMod:4)AHC(UniMod:4)NQAIR2		1865.61	2499.65
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	TPMCAHCNQAIR	TPMC(UniMod:4)AHC(UniMod:4)NQAIR	3	TPMC(UniMod:4)AHC(UniMod:4)NQAIR3	43155.6	62424.7	61357
Q9ES40	Q9ES40	PRAF3_RAT	Arl6ip5	PRA1 family protein 3	1	TPMGIILDALEQQEDSINK	TPMGIILDALEQQEDSINK	3	TPMGIILDALEQQEDSINK3	40612.8	35119.8	51872.3
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	TPMIAGGLFVMDK	TPMIAGGLFVMDK	2	TPMIAGGLFVMDK2	31084.4	31698.9	26651.8
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	TPMITPDLESGVK	TPMITPDLESGVK	2	TPMITPDLESGVK2	39988.5	33926.4	47181.2
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	TPMLSADVSTAK	TPMLSADVSTAK	2	TPMLSADVSTAK2	53161.5	49053.6	55826.2
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	TPMTDVCR	TPMTDVC(UniMod:4)R	2	TPMTDVC(UniMod:4)R2	66642.1	56725.5	52576.2
Q9WVK7	Q9WVK7	HCDH_RAT	Hadh	Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial	1	TPMTSQK	TPMTSQK	2	TPMTSQK2			20608.4
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	TPMVSVPK	TPMVSVPK	2	TPMVSVPK2	56517.8	76993.1	47840.1
A0A8I5ZQE4	A0A8I5ZQE4	A0A8I5ZQE4_RAT	Supt5h	Transcription elongation factor SPT5	1	TPMYGSQTPLQDGSR	TPMYGSQTPLQDGSR	2	TPMYGSQTPLQDGSR2	2085.51	1950.73	7263.32
A0A0G2K543	A0A0G2K543	A0A0G2K543_RAT	C2cd5	C2 calcium-dependent domain containing 5	1	TPNDGSYEQHISHMQK	TPNDGSYEQHISHMQK	4	TPNDGSYEQHISHMQK4	1943.02	4866.15	2767.04
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	TPNEEIDHQNDDQR	TPNEEIDHQNDDQR	2	TPNEEIDHQNDDQR2	1478.01		
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	TPNEEIDHQNDDQR	TPNEEIDHQNDDQR	3	TPNEEIDHQNDDQR3	9543.58	8189.14	
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	TPNEEIDHQNDDQRK	TPNEEIDHQNDDQRK	2	TPNEEIDHQNDDQRK2			5460.55
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	TPNEEIDHQNDDQRK	TPNEEIDHQNDDQRK	3	TPNEEIDHQNDDQRK3			3949.59
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	TPNEEIDHQNDDQRK	TPNEEIDHQNDDQRK	4	TPNEEIDHQNDDQRK4			1453.39
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	TPNGIVVAGK	TPNGIVVAGK	2	TPNGIVVAGK2	11732.5	10925.5	6133.04
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	TPNGLAIDHR	TPNGLAIDHR	2	TPNGLAIDHR2	15465.3	16665.8	15388.6
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	TPNGPNMDK	TPNGPNMDK	2	TPNGPNMDK2		12216.9	14275.2
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TPNGVVLAPVQLGK	TPNGVVLAPVQLGK	2	TPNGVVLAPVQLGK2	76972.7	89063	91377.3
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TPNGVVLAPVQLGK	TPNGVVLAPVQLGK	3	TPNGVVLAPVQLGK3	4922.76	4749.52	3357.06
B1WC37	B1WC37	MTU1_RAT	Trmu	Mitochondrial tRNA-specific 2-thiouridylase 1	1	TPNPDISCNK	TPNPDISC(UniMod:4)NK	2	TPNPDISC(UniMod:4)NK2	1543.18	2823.64	
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	TPNSSPEQR	TPNSSPEQR	2	TPNSSPEQR2			33312.2
O88658	O88658	KIF1B_RAT	Kif1b	Kinesin-like protein KIF1B	1	TPNTFAVCTK	TPNTFAVC(UniMod:4)TK	2	TPNTFAVC(UniMod:4)TK2	7578.13	4170.98	
P18266	P18266	GSK3B_RAT	Gsk3b	Glycogen synthase kinase-3 beta	1	TPPEAIALCSR	TPPEAIALC(UniMod:4)SR	2	TPPEAIALC(UniMod:4)SR2	34662.2	44609.9	22304.9
P18265	P18265	GSK3A_RAT	Gsk3a	Glycogen synthase kinase-3 alpha	1	TPPEAIALCSSLLEYTPSSR	TPPEAIALC(UniMod:4)SSLLEYTPSSR	3	TPPEAIALC(UniMod:4)SSLLEYTPSSR3	9315.34		4336.51
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	TPPGLVGTAAALQPVPAMPSALQNISLK	TPPGLVGTAAALQPVPAMPSALQNISLK	3	TPPGLVGTAAALQPVPAMPSALQNISLK3	9003.02	8944.97	6484.48
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	TPPGSSPAGTQSSTSNR	TPPGSSPAGTQSSTSNR	2	TPPGSSPAGTQSSTSNR2	9619.38		16636.8
Q5PQN9	Q5PQN9	RM38_RAT	Mrpl38	Large ribosomal subunit protein mL38	1	TPPLGPMPNEDIDVSNLER	TPPLGPMPNEDIDVSNLER	3	TPPLGPMPNEDIDVSNLER3	2726.38		
Q66H12	Q66H12	NAGAB_RAT	Naga	Alpha-N-acetylgalactosaminidase	1	TPPMGWLAWER	TPPMGWLAWER	2	TPPMGWLAWER2	21551.6	20547	19874.2
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	TPPMLRPVDPQIPQLVAVK	TPPMLRPVDPQIPQLVAVK	3	TPPMLRPVDPQIPQLVAVK3	104253	119384	108352
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	TPPMLRPVDPQIPQLVAVK	TPPMLRPVDPQIPQLVAVK	4	TPPMLRPVDPQIPQLVAVK4	3379.53	4709.96	
P51111	P51111	HD_RAT	Htt	Huntingtin	1	TPPPELLQALTTPGGLGQLTLVR	TPPPELLQALTTPGGLGQLTLVR	3	TPPPELLQALTTPGGLGQLTLVR3	18306.5	19179.6	21675.1
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	TPPRPVSS	TPPRPVSS	2	TPPRPVSS2		33089.3	
Q5BJM8	Q5BJM8	ZNT7_RAT	Slc30a7	Zinc transporter 7	1	TPPSLENVLPQCYQR	TPPSLENVLPQC(UniMod:4)YQR	2	TPPSLENVLPQC(UniMod:4)YQR2	27311.2	14084.6	24371.4
A0A8I6ADA8	A0A8I6ADA8	A0A8I6ADA8_RAT	Abhd4	Abhydrolase domain containing 4, N-acyl phospholipase B	1	TPPTWVK	TPPTWVK	2	TPPTWVK2	77021.1	71610.4	84826.9
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	TPPVAVTSPITHTAQSALK	TPPVAVTSPITHTAQSALK	3	TPPVAVTSPITHTAQSALK3	11084.8	10111.9	15521.8
A0A8I6A5H5	A0A8I6A5H5	A0A8I6A5H5_RAT	Rela	RELA proto-oncogene, NF-kB subunit	1	TPPYADPSLQAPVR	TPPYADPSLQAPVR	2	TPPYADPSLQAPVR2	23349.6	21386.3	15948.3
A0A8I6A5H5	A0A8I6A5H5	A0A8I6A5H5_RAT	Rela	RELA proto-oncogene, NF-kB subunit	1	TPPYADPSLQAPVR	TPPYADPSLQAPVR	3	TPPYADPSLQAPVR3	3886.45	6561.47	7398.99
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	TPQAANAPDLGDAIVK	TPQAANAPDLGDAIVK	2	TPQAANAPDLGDAIVK2	25332.5	33605	22179.1
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	TPQAANAPDLGDAIVK	TPQAANAPDLGDAIVK	3	TPQAANAPDLGDAIVK3		5515.35	4351.78
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	TPQASTYSYETSDR	TPQASTYSYETSDR	2	TPQASTYSYETSDR2	5298.47	8376.33	4642.98
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	TPQIDSNK	TPQIDSNK	2	TPQIDSNK2		31968.2	
P07151	P07151	B2MG_RAT	B2m	Beta-2-microglobulin	1	TPQIQVYSR	TPQIQVYSR	2	TPQIQVYSR2	1.05724e+06	1.10937e+06	1.14397e+06
Q5PQT2	Q5PQT2;D3ZW40	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	0	TPQIVALAK	TPQIVALAK	2	TPQIVALAK2	22332.9	17830.7	17071.1
P97531	P97531	CIP4_RAT	Trip10	Cdc42-interacting protein 4	1	TPQMGDPASLEPR	TPQMGDPASLEPR	2	TPQMGDPASLEPR2	8167.14	3086.38	6670.84
Q8R431	Q8R431	MGLL_RAT	Mgll	Monoglyceride lipase	1	TPQNVPYQDLPHLVNADGQYLFCR	TPQNVPYQDLPHLVNADGQYLFC(UniMod:4)R	3	TPQNVPYQDLPHLVNADGQYLFC(UniMod:4)R3	72107.1	73640.7	53139.3
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	TPQQLESK	TPQQLESK	2	TPQQLESK2		18411.8	
A0A8I6G3S1	A0A8I6G3S1	A0A8I6G3S1_RAT	Mon1b	Vacuolar fusion protein MON1 homolog	1	TPQSAAQLR	TPQSAAQLR	2	TPQSAAQLR2	6035.64	10057.8	3694.49
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	TPQSTSEPEDHLPESSLPR	TPQSTSEPEDHLPESSLPR	3	TPQSTSEPEDHLPESSLPR3	11204.2		12310.8
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	TPQVYTIPPPR	TPQVYTIPPPR	2	TPQVYTIPPPR2	937171	8.72561e+06	1.53222e+06
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	TPQVYTIPPPR	TPQVYTIPPPR	3	TPQVYTIPPPR3	1.70423e+06	2.14132e+06	2.08571e+06
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	TPQVYTIPPPREQMSK	TPQVYTIPPPREQMSK	2	TPQVYTIPPPREQMSK2	36040.7	48494.6	51936.4
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	TPQVYTIPPPREQMSK	TPQVYTIPPPREQMSK	3	TPQVYTIPPPREQMSK3	581849	891057	924312
B5DF48	B5DF48	B5DF48_RAT	Tyw1	tRNA 4-demethylwyosine synthase (AdoMet-dependent)	1	TPQWALFGAR	TPQWALFGAR	2	TPQWALFGAR2	5411.48	10179.4	4927.5
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	TPSAAYLWVGTGASDAEK	TPSAAYLWVGTGASDAEK	2	TPSAAYLWVGTGASDAEK2	401435	442866	380813
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	TPSAAYLWVGTGASDAEK	TPSAAYLWVGTGASDAEK	3	TPSAAYLWVGTGASDAEK3	58815.8	62446.8	79952.4
P09117	P09117	ALDOC_RAT	Aldoc	Fructose-bisphosphate aldolase C	1	TPSALAILENANVLAR	TPSALAILENANVLAR	2	TPSALAILENANVLAR2	19383.4	33172.3	28631.3
P09117	P09117	ALDOC_RAT	Aldoc	Fructose-bisphosphate aldolase C	1	TPSALAILENANVLAR	TPSALAILENANVLAR	3	TPSALAILENANVLAR3	7951.17	5122.38	4087.79
G3V904	G3V904	G3V904_RAT	Pld4	Phospholipase D family, member 4	1	TPSAQPAVTTVQEQLR	TPSAQPAVTTVQEQLR	2	TPSAQPAVTTVQEQLR2	8005.22	5731.93	5296.36
O70593	O70593	SGTA_RAT	Sgta	Small glutamine-rich tetratricopeptide repeat-containing protein alpha	1	TPSASHEEQQE	TPSASHEEQQE	2	TPSASHEEQQE2			24016
A0A8I5ZYW3	A0A8I5ZYW3	A0A8I5ZYW3_RAT	Lsp1	Lymphocyte-specific protein 1	1	TPSCQDIVAGDMSK	TPSC(UniMod:4)QDIVAGDMSK	2	TPSC(UniMod:4)QDIVAGDMSK2	18501.1	18707.8	18661
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	TPSEASFSDVR	TPSEASFSDVR	2	TPSEASFSDVR2	4869.53	1344.11	3537.45
D3ZXB1	D3ZXB1	D3ZXB1_RAT	Map4k2	Mitogen-activated protein kinase kinase kinase kinase 2	1	TPSEIQFHQVK	TPSEIQFHQVK	3	TPSEIQFHQVK3	10806.5	3742.6	3918.27
Q63028	Q05764;Q62847;Q63028	ADDA_RAT	Add1	Alpha-adducin	0	TPSFLKK	TPSFLKK	2	TPSFLKK2	5785.23	35687	9282.12
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	TPSGEFLER	TPSGEFLER	2	TPSGEFLER2	89607.4	95961.4	73788.7
A0A8I5ZVI9	A0A8I5ZVI9	A0A8I5ZVI9_RAT	Ranbp3	RAN binding protein 3	1	TPSGGSEETHCEEEQVAPQAFVFGQNLR	TPSGGSEETHC(UniMod:4)EEEQVAPQAFVFGQNLR	4	TPSGGSEETHC(UniMod:4)EEEQVAPQAFVFGQNLR4	3876.66		5189.24
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	TPSGNLVNR	TPSGNLVNR	2	TPSGNLVNR2	61867.8	56626.7	56372.5
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	TPSIDLQR	TPSIDLQR	2	TPSIDLQR2	50234.8	70648.7	44834.3
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	TPSLDSEGSNCPATK	TPSLDSEGSNC(UniMod:4)PATK	2	TPSLDSEGSNC(UniMod:4)PATK2	9152.35	5673.99	6347.78
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	TPSLFPCASGAFSSFR	TPSLFPC(UniMod:4)ASGAFSSFR	2	TPSLFPC(UniMod:4)ASGAFSSFR2	478186	472013	527647
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	TPSLFPCASGAFSSFR	TPSLFPC(UniMod:4)ASGAFSSFR	3	TPSLFPC(UniMod:4)ASGAFSSFR3	32434.5	33923.1	36562.2
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	TPSLGEVTVAEVGWDALK	TPSLGEVTVAEVGWDALK	2	TPSLGEVTVAEVGWDALK2	64134.7	62929.2	49174
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	TPSLGEVTVAEVGWDALK	TPSLGEVTVAEVGWDALK	3	TPSLGEVTVAEVGWDALK3	5108.19	15515.6	9819.24
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	TPSNDLYKPLR	TPSNDLYKPLR	2	TPSNDLYKPLR2		5561.09	
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	TPSNDLYKPLR	TPSNDLYKPLR	3	TPSNDLYKPLR3	59527.4	85717.6	75629
B1WBV4	B1WBV4	B1WBV4_RAT	Plekhf2	Pleckstrin homology and FYVE domain containing 2	1	TPSNEHAAVWVPDSEATVCMR	TPSNEHAAVWVPDSEATVC(UniMod:4)MR	3	TPSNEHAAVWVPDSEATVC(UniMod:4)MR3	71081.7	60071.1	64332.1
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	TPSNSLVMTTTVSHNIVK	TPSNSLVMTTTVSHNIVK	3	TPSNSLVMTTTVSHNIVK3	1893.75		3046.28
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	TPSNSLVMTTTVSHNIVKPFR	TPSNSLVMTTTVSHNIVKPFR	3	TPSNSLVMTTTVSHNIVKPFR3	31641.6	31767.7	21418.3
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	TPSNSLVMTTTVSHNIVKPFR	TPSNSLVMTTTVSHNIVKPFR	4	TPSNSLVMTTTVSHNIVKPFR4	317818	287775	292275
G3V7N6	G3V7N6	G3V7N6_RAT	Mboat7	Membrane bound O-acyltransferase domain containing 7-like 1	1	TPSQATTSQAK	TPSQATTSQAK	2	TPSQATTSQAK2			3367.41
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	TPSQDSDYINANFIK	TPSQDSDYINANFIK	2	TPSQDSDYINANFIK2	79877.5	99804	68649.2
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	TPSQDSDYINANFIK	TPSQDSDYINANFIK	3	TPSQDSDYINANFIK3	25150.5	23254.9	24984.7
D4A482	D4A482	D4A482_RAT	Mfsd2b	Major facilitator superfamily domain containing 2B	1	TPSQDTSSQLSLR	TPSQDTSSQLSLR	2	TPSQDTSSQLSLR2	35741.2	32101.5	19952.7
D4A482	D4A482	D4A482_RAT	Mfsd2b	Major facilitator superfamily domain containing 2B	1	TPSQDTSSQLSLR	TPSQDTSSQLSLR	3	TPSQDTSSQLSLR3	4927.36	4664.17	2060
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	TPSQEQLLAAALAAAR	TPSQEQLLAAALAAAR	3	TPSQEQLLAAALAAAR3	4541.26		3195.19
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	TPSSAQYLEEK	TPSSAQYLEEK	2	TPSSAQYLEEK2	54513.5	49211	45475
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	TPSSGMSSTMK	TPSSGMSSTMK	2	TPSSGMSSTMK2	30027.2	32563.4	29193.7
D3ZBW5	D3ZBW5	D3ZBW5_RAT	LOC685203	Small membrane A-kinase anchor protein	1	TPSTDEQQQVQEEVK	TPSTDEQQQVQEEVK	2	TPSTDEQQQVQEEVK2	7572.48	4345.33	7617.48
D3ZBW5	D3ZBW5	D3ZBW5_RAT	LOC685203	Small membrane A-kinase anchor protein	1	TPSTDEQQQVQEEVK	TPSTDEQQQVQEEVK	3	TPSTDEQQQVQEEVK3	1438.87	849.635	2862.59
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	TPSVSSQPSK	TPSVSSQPSK	2	TPSVSSQPSK2	41757.8	43943.1	46477.8
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TPSVTIPGPNIIVPSYR	TPSVTIPGPNIIVPSYR	2	TPSVTIPGPNIIVPSYR2	1.15552e+06	1.54016e+06	1.35201e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TPSVTIPGPNIIVPSYR	TPSVTIPGPNIIVPSYR	3	TPSVTIPGPNIIVPSYR3	278856	383121	306667
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	TPSVTVQSSGSFFQK	TPSVTVQSSGSFFQK	2	TPSVTVQSSGSFFQK2	223335	219082	215655
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	TPSVTVQSSGSFFQK	TPSVTVQSSGSFFQK	3	TPSVTVQSSGSFFQK3	18692.5	20271.6	23106.1
P14046	Q6IE52;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	TPSVTVQSSGSFSQK	TPSVTVQSSGSFSQK	2	TPSVTVQSSGSFSQK2	26062.7	1.95294e+06	21616.5
P14046	Q6IE52;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	TPSVTVQSSGSFSQK	TPSVTVQSSGSFSQK	3	TPSVTVQSSGSFSQK3	2.87739e+06	2.58535e+06	2.51238e+06
P14046	Q6IE52;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	TPSVTVQSSGSFSQKFQVDK	TPSVTVQSSGSFSQKFQVDK	3	TPSVTVQSSGSFSQKFQVDK3	6507.38	7611.13	
P14046	Q6IE52;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	TPSVTVQSSGSFSQKFQVDKSNR	TPSVTVQSSGSFSQKFQVDKSNR	4	TPSVTVQSSGSFSQKFQVDKSNR4	31656.8	25049.4	36155
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	TPSVVYR	TPSVVYR	2	TPSVVYR2	107282	131071	106376
D3ZTA9	D3ZTA9;D3ZFR1	D3ZTA9_RAT	Hs3st3b1	Sulfotransferase	0	TPSYFVTR	TPSYFVTR	2	TPSYFVTR2	13184.9	12721.2	8841.58
O88959	O88959	INHBE_RAT	Inhbe	Inhibin beta E chain	1	TPTCESETPLCCR	TPTC(UniMod:4)ESETPLC(UniMod:4)C(UniMod:4)R	2	TPTC(UniMod:4)ESETPLC(UniMod:4)C(UniMod:4)R2	17511.6	13655.1	14294.2
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	TPTEAPADCR	TPTEAPADC(UniMod:4)R	2	TPTEAPADC(UniMod:4)R2	8251.97	4096.18	
P80431	P80431	COX7B_RAT	Cox7b	Cytochrome c oxidase subunit 7B, mitochondrial	1	TPTFHDK	TPTFHDK	2	TPTFHDK2	67452.9	52372	86114.5
G3V6Q3	G3V6Q3	G3V6Q3_RAT	Wdr13	Uncharacterized protein	1	TPTFPQFR	TPTFPQFR	2	TPTFPQFR2	38050.8	51773.6	35566.2
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	TPTKPSSLNNQLVSVDCK	TPTKPSSLNNQLVSVDC(UniMod:4)K	3	TPTKPSSLNNQLVSVDC(UniMod:4)K3	37454.2	47928.9	33911.7
D4A584	D4A584	D4A584_RAT	Fes	Tyrosine-protein kinase	1	TPTLEIIK	TPTLEIIK	2	TPTLEIIK2	7907.52	5845.22	5771.03
Q5M827	Q5M827	PIR_RAT	Pir	Pirin	1	TPTLYLDFK	TPTLYLDFK	2	TPTLYLDFK2		2640.63	
D3ZJF9	D3ZJF9	D3ZJF9_RAT	Gla	Alpha-galactosidase	1	TPTMGWLHWER	TPTMGWLHWER	2	TPTMGWLHWER2	2253.66	2713.15	946.296
D3ZJF9	D3ZJF9	D3ZJF9_RAT	Gla	Alpha-galactosidase	1	TPTMGWLHWER	TPTMGWLHWER	3	TPTMGWLHWER3	21651.9	16359.5	45032.4
A0A8I6GAD6	A0A8I6GAD6	A0A8I6GAD6_RAT	Nrbp1	Nuclear receptor binding protein 1	1	TPTPEPAEVETR	TPTPEPAEVETR	2	TPTPEPAEVETR2	92767.1	85205.7	94285.2
A0A8I6GAD6	A0A8I6GAD6	A0A8I6GAD6_RAT	Nrbp1	Nuclear receptor binding protein 1	1	TPTPEPAEVETRK	TPTPEPAEVETRK	3	TPTPEPAEVETRK3	61647.7	64619	78526.6
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	TPTQELR	TPTQELR	2	TPTQELR2	18290.5	16458.2	13232.6
M0RAK0	M0RAK0	M0RAK0_RAT	Proser2	Proline and serine rich 2	1	TPTSLASR	TPTSLASR	2	TPTSLASR2	94618.8	103500	110879
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	TPTTGSK	TPTTGSK	1	TPTTGSK1	2368.78	1126.53	1858.2
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	TPTTVDR	TPTTVDR	2	TPTTVDR2	109158		114951
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	TPTVPDLPGVLPSPPDGPEER	TPTVPDLPGVLPSPPDGPEER	3	TPTVPDLPGVLPSPPDGPEER3	42464.8	32936.2	30559
Q8VHF0	Q8VHF0	MARK3_RAT	Mark3	MAP/microtubule affinity-regulating kinase 3	1	TPVASTHSISSATTPDR	TPVASTHSISSATTPDR	3	TPVASTHSISSATTPDR3	7709.3	4922.8	2597.49
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	TPVATVPAMPQEK	TPVATVPAMPQEK	2	TPVATVPAMPQEK2	120648	116245	103437
O88277	O88277	FAT2_RAT	Fat2	Protocadherin Fat 2	1	TPVAVVFAR	TPVAVVFAR	2	TPVAVVFAR2	2531.5	2718.1	
A0A8I6ALB6	A0A8I6ALB6	A0A8I6ALB6_RAT	Tbc1d2b	TBC1 domain family, member 2B	1	TPVCSEEQGPAR	TPVC(UniMod:4)SEEQGPAR	2	TPVC(UniMod:4)SEEQGPAR2	3584.27		3500.08
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	TPVCVYMR	TPVC(UniMod:4)VYMR	2	TPVC(UniMod:4)VYMR2	196024	173334	183059
F1M2D4	F1M2D4	F1M2D4_RAT	Arhgap23	Rho GTPase activating protein 23	1	TPVDDKEPQSVPNIEYLLPNIGR	TPVDDKEPQSVPNIEYLLPNIGR	3	TPVDDKEPQSVPNIEYLLPNIGR3	7355.98	3218.97	5312.91
Q66H91	Q66H91	GIT2_RAT	Git2	ARF GTPase-activating protein GIT2	1	TPVDYAR	TPVDYAR	2	TPVDYAR2	29997.6	65850.3	61773.3
E9PT66	E9PT66	E9PT66_RAT	Sf3b3	Splicing factor 3b, subunit 3	1	TPVEEVPAAIAPFQGR	TPVEEVPAAIAPFQGR	2	TPVEEVPAAIAPFQGR2	14311.3	14148	11451.2
E9PT66	E9PT66	E9PT66_RAT	Sf3b3	Splicing factor 3b, subunit 3	1	TPVEEVPAAIAPFQGR	TPVEEVPAAIAPFQGR	3	TPVEEVPAAIAPFQGR3	12225.4	15041.1	10048.6
P60868	D3ZZK1;A0A8I6AG52;A0A0G2K6L6;P60868	RS20_RAT	Rps20	Small ribosomal subunit protein uS10	0	TPVEPEVAIHR	TPVEPEVAIHR	2	TPVEPEVAIHR2	522.666	1663.39	1056.08
P60868	D3ZZK1;A0A8I6AG52;A0A0G2K6L6;P60868	RS20_RAT	Rps20	Small ribosomal subunit protein uS10	0	TPVEPEVAIHR	TPVEPEVAIHR	3	TPVEPEVAIHR3	38597.2	21504.4	24718.9
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	TPVFIFER	TPVFIFER	2	TPVFIFER2	63283.2	48108	41762.8
P29266	P29266	3HIDH_RAT	Hibadh	3-hydroxyisobutyrate dehydrogenase, mitochondrial	1	TPVGFIGLGNMGNPMAK	TPVGFIGLGNMGNPMAK	2	TPVGFIGLGNMGNPMAK2	16210.9	10379.1	13433.2
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	TPVGGCFVAELQSGGR	TPVGGC(UniMod:4)FVAELQSGGR	2	TPVGGC(UniMod:4)FVAELQSGGR2	221838	208988	202870
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	TPVGGCFVAELQSGGR	TPVGGC(UniMod:4)FVAELQSGGR	3	TPVGGC(UniMod:4)FVAELQSGGR3	158959	163917	196840
P51111	P51111	HD_RAT	Htt	Huntingtin	1	TPVILISEVVR	TPVILISEVVR	2	TPVILISEVVR2	8444.81	7694.79	4309.75
P35281	P35281	RAB10_RAT	Rab10	Ras-related protein Rab-10	1	TPVKEPNSENVDISSGGGVTGWK	TPVKEPNSENVDISSGGGVTGWK	3	TPVKEPNSENVDISSGGGVTGWK3	94048.9	71749.7	68346.3
A0A0G2K069	A0A0G2K069	A0A0G2K069_RAT	Col11a2	Collagen type XI alpha 2 chain	1	TPVLEQLPVLDASFSDLGAPTR	TPVLEQLPVLDASFSDLGAPTR	3	TPVLEQLPVLDASFSDLGAPTR3	6077.79	6516.84	7861.73
A0A0G2K069	A0A0G2K069	A0A0G2K069_RAT	Col11a2	Collagen type XI alpha 2 chain	1	TPVLEQLPVLDASFSDLGAPTRR	TPVLEQLPVLDASFSDLGAPTRR	3	TPVLEQLPVLDASFSDLGAPTRR3	23955.3	14542.6	27705.3
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	TPVLFDVYEIK	TPVLFDVYEIK	2	TPVLFDVYEIK2	78914.6	83493.5	90204.5
F7FLB7	F7FLB7	F7FLB7_RAT	Anxa11	Annexin	1	TPVLFDVYEIK	TPVLFDVYEIK	3	TPVLFDVYEIK3	6696.74	6940.73	
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	TPVLLMLGQEDR	TPVLLMLGQEDR	2	TPVLLMLGQEDR2	80208.1	74944.7	81508.2
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	TPVLLMLGQEDR	TPVLLMLGQEDR	3	TPVLLMLGQEDR3	1737.95	3668.2	5778.23
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	TPVLLMLGQEDRR	TPVLLMLGQEDRR	3	TPVLLMLGQEDRR3	47091.7	53595.1	50978.8
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	TPVLSAETFTGK	TPVLSAETFTGK	2	TPVLSAETFTGK2	708831	860898	780643
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	TPVLTADEGILK	TPVLTADEGILK	2	TPVLTADEGILK2		5102.38	3435.43
Q9Z1Z1	Q9Z1Z1	E2AK3_RAT	Eif2ak3	Eukaryotic translation initiation factor 2-alpha kinase 3	1	TPVLVGSDEFDK	TPVLVGSDEFDK	2	TPVLVGSDEFDK2			3723.42
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	TPVPSDIAISR	TPVPSDIAISR	2	TPVPSDIAISR2	79659.1	69011.4	73125.4
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	TPVQSQQPSATAPSGADEK	TPVQSQQPSATAPSGADEK	2	TPVQSQQPSATAPSGADEK2	60066.6	29641.6	46989.6
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	TPVQSQQPSATAPSGADEK	TPVQSQQPSATAPSGADEK	3	TPVQSQQPSATAPSGADEK3	74923.5	83931.2	95076.3
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	TPVSCFNVQMCVGATGHNIPQK	TPVSC(UniMod:4)FNVQMC(UniMod:4)VGATGHNIPQK	3	TPVSC(UniMod:4)FNVQMC(UniMod:4)VGATGHNIPQK3	1.64457e+06	1.63785e+06	1.71458e+06
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	TPVSCFNVQMCVGATGHNIPQK	TPVSC(UniMod:4)FNVQMC(UniMod:4)VGATGHNIPQK	4	TPVSC(UniMod:4)FNVQMC(UniMod:4)VGATGHNIPQK4	9928.16	16768.7	15299.8
P62815	P62815;D3ZZS8	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	0	TPVSEDMLGR	TPVSEDMLGR	2	TPVSEDMLGR2	66255.1	58496.4	62015.2
P02770	P02770	ALBU_RAT	Alb	Albumin	1	TPVSEKVTK	TPVSEKVTK	2	TPVSEKVTK2	3254.93		4736.89
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TPVSITEHPK	TPVSITEHPK	2	TPVSITEHPK2	42745.9	41260.4	32687.9
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	TPVTGNDGVPTMTLTSMLGTCPK	TPVTGNDGVPTMTLTSMLGTC(UniMod:4)PK	3	TPVTGNDGVPTMTLTSMLGTC(UniMod:4)PK3	7433.27	4095.1	8299.22
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	TPVTVTLK	TPVTVTLK	1	TPVTVTLK1	2797.96	2728.07	
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	TPVTVTLK	TPVTVTLK	2	TPVTVTLK2	513906	530683	497644
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	TPVTVTLKENER	TPVTVTLKENER	3	TPVTVTLKENER3	9988.41	18167.1	29981.8
Q9QZ81	Q9QZ81;F1LUS2;F1LUQ5;A0A8I5ZP12	AGO2_RAT	Ago2	Protein argonaute-2	0	TPVYAEVK	TPVYAEVK	2	TPVYAEVK2	8769.44	5722.69	3237.32
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	TPWLGSSTR	TPWLGSSTR	2	TPWLGSSTR2	104388	62410.7	73761.6
G3V7E6	G3V7E6	G3V7E6_RAT	Pcm1	Pericentriolar material 1	1	TPWLYDQEGGVEKPFFK	TPWLYDQEGGVEKPFFK	3	TPWLYDQEGGVEKPFFK3	3247.97		
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	TPWQVTFKPK	TPWQVTFKPK	2	TPWQVTFKPK2	6299.57	5805.69	1684.72
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	TPWQVTFKPK	TPWQVTFKPK	3	TPWQVTFKPK3	66732.4	60115.8	69415.4
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	TPYNILSSPNYVGVTK	TPYNILSSPNYVGVTK	2	TPYNILSSPNYVGVTK2	11900.9	14656.9	15695.6
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	TPYNILSSPNYVGVTK	TPYNILSSPNYVGVTK	3	TPYNILSSPNYVGVTK3	13772.1	10170.1	13245.7
E9PU10	E9PU10;D4A2T4	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	0	TPYQHPK	TPYQHPK	1	TPYQHPK1			3434.69
E9PU10	E9PU10;D4A2T4	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	0	TPYQHPK	TPYQHPK	2	TPYQHPK2			17522.3
Q99NA5	Q99NA5	IDH3A_RAT	Idh3a	Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial	1	TPYTDVNIVTIR	TPYTDVNIVTIR	2	TPYTDVNIVTIR2	82780	72880.3	81347.2
Q99NA5	Q99NA5	IDH3A_RAT	Idh3a	Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial	1	TPYTDVNIVTIR	TPYTDVNIVTIR	3	TPYTDVNIVTIR3	15600.1	19901.9	20939.7
P35565	P35565	CALX_RAT	Canx	Calnexin	1	TPYTIMFGPDK	TPYTIMFGPDK	2	TPYTIMFGPDK2	207458	246977	237184
B1WC06	B1WC06	B1WC06_RAT	Mon1a	Vacuolar fusion protein MON1 homolog	1	TPYYSVAQVGIPDLR	TPYYSVAQVGIPDLR	2	TPYYSVAQVGIPDLR2	5914.57		4112.68
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	TQAAAVQK	TQAAAVQK	2	TQAAAVQK2			78946.3
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	TQACLCYICAGNVER	TQAC(UniMod:4)LC(UniMod:4)YIC(UniMod:4)AGNVER	2	TQAC(UniMod:4)LC(UniMod:4)YIC(UniMod:4)AGNVER2	6364.69	10894.1	5778.56
P14056	P14056	ARAF_RAT	Araf	Serine/threonine-protein kinase A-Raf	1	TQADELPACLLSAAR	TQADELPAC(UniMod:4)LLSAAR	2	TQADELPAC(UniMod:4)LLSAAR2	21135.5	11284.6	20860.5
A0A8I5ZUT2	A0A8I5ZUT2	A0A8I5ZUT2_RAT	Irgq	Immunity-related GTPase Q	1	TQAEALQR	TQAEALQR	2	TQAEALQR2	29371.9	19479	22222.1
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	TQAELPPLALSQLFDPDACGR	TQAELPPLALSQLFDPDAC(UniMod:4)GR	3	TQAELPPLALSQLFDPDAC(UniMod:4)GR3	85950	70307.5	92682.6
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	TQAFEADNLK	TQAFEADNLK	2	TQAFEADNLK2	42699.6	27413.4	24570.8
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	TQAGCEIPCPDNSHYELCGPR	TQAGC(UniMod:4)EIPC(UniMod:4)PDNSHYELC(UniMod:4)GPR	3	TQAGC(UniMod:4)EIPC(UniMod:4)PDNSHYELC(UniMod:4)GPR3	2.35822e+06	2.30216e+06	2.62787e+06
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	TQAGCEIPCPDNSHYELCGPR	TQAGC(UniMod:4)EIPC(UniMod:4)PDNSHYELC(UniMod:4)GPR	4	TQAGC(UniMod:4)EIPC(UniMod:4)PDNSHYELC(UniMod:4)GPR4	11190.1	23785.4	22273.1
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	TQAGWLLISALMTLGPAVVSHHLPR	TQAGWLLISALMTLGPAVVSHHLPR	4	TQAGWLLISALMTLGPAVVSHHLPR4	2102.18		
B5DF57	B5DF57	B5DF57_RAT	Epb42	protein-glutamine gamma-glutamyltransferase	1	TQAIFPISSLGDK	TQAIFPISSLGDK	2	TQAIFPISSLGDK2	12450	4948.35	8007.34
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	TQAILTVQEPHDGTQPWFISK	TQAILTVQEPHDGTQPWFISK	3	TQAILTVQEPHDGTQPWFISK3	17203.1	16115.1	9394.43
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	TQAILTVQEPHDGTQPWFISKPR	TQAILTVQEPHDGTQPWFISKPR	3	TQAILTVQEPHDGTQPWFISKPR3	26165.1	26774.3	26690.9
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	TQAILTVQEPHDGTQPWFISKPR	TQAILTVQEPHDGTQPWFISKPR	4	TQAILTVQEPHDGTQPWFISKPR4	81839.6	101867	77728.8
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	TQALEVYCDMTSDGGGWIVFLR	TQALEVYC(UniMod:4)DMTSDGGGWIVFLR	3	TQALEVYC(UniMod:4)DMTSDGGGWIVFLR3		6225.98	
Q9EQH1	Q9EQH1	GAB2_RAT	Gab2	GRB2-associated-binding protein 2	1	TQALQNTMQEWTDVR	TQALQNTMQEWTDVR	2	TQALQNTMQEWTDVR2	6753.31	5607.69	6092.82
P70473	P70473	AMACR_RAT	Amacr	Alpha-methylacyl-CoA racemase	1	TQAMGLWAQPR	TQAMGLWAQPR	2	TQAMGLWAQPR2	4178.34	3047.78	
P27952	A0A0G2K8H4;A0A0U1RVI9;D3ZT78;A0A8I6ADQ7;D3ZAS1;P27952;D3ZQW7	RS2_RAT	Rps2	Small ribosomal subunit protein uS5	0	TQAPAVATT	TQAPAVATT	1	TQAPAVATT1	20911.7	24325.6	17275
P27952	A0A0G2K8H4;A0A0U1RVI9;D3ZT78;A0A8I6ADQ7;D3ZAS1;P27952;D3ZQW7	RS2_RAT	Rps2	Small ribosomal subunit protein uS5	0	TQAPAVATT	TQAPAVATT	2	TQAPAVATT2	12314.3	10732.2	10420.7
A0A8I5Y0Y2	A0A8I5Y0Y2	A0A8I5Y0Y2_RAT	Ddi2	DNA damage inducible 1 homolog 2	1	TQAQLLSPGER	TQAQLLSPGER	2	TQAQLLSPGER2	1120.91		4467.28
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	TQAVEYFGEWILNPSNYAFQR	TQAVEYFGEWILNPSNYAFQR	3	TQAVEYFGEWILNPSNYAFQR3	2711.08	4768.3	2258.17
A0A8I6GEV9	A0A8I6GEV9	A0A8I6GEV9_RAT	Abce1	ATP binding cassette subfamily E member 1	1	TQAVVCQQLDLTHLK	TQAVVC(UniMod:4)QQLDLTHLK	3	TQAVVC(UniMod:4)QQLDLTHLK3	4314.55	10733.9	5052.76
Q5PPI8	Q5PPI8	Q5PPI8_RAT	Rmc1	Regulator of MON1-CCZ1	1	TQAVVDQSDVYTHVLSPFVENK	TQAVVDQSDVYTHVLSPFVENK	3	TQAVVDQSDVYTHVLSPFVENK3	5326.74	15701.3	6675.53
D4A9G5	D4A9G5	D4A9G5_RAT	Dpy19l3	Dpy-19 like C-mannosyltransferase 3	1	TQAVYQIYAK	TQAVYQIYAK	2	TQAVYQIYAK2	10472.1	9671.44	7431.23
P55797	P55797	APOC4_RAT	Apoc4	Apolipoprotein C-IV	1	TQAWLQSSR	TQAWLQSSR	2	TQAWLQSSR2	1.83112e+07	2.03018e+07	2.03444e+07
P38652	P38652	PGM1_RAT	Pgm1	Phosphoglucomutase-1	1	TQAYPDQKPGTSGLR	TQAYPDQKPGTSGLR	3	TQAYPDQKPGTSGLR3	20859.6	14819.4	22588.9
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	TQCALAASK	TQC(UniMod:4)ALAASK	1	TQC(UniMod:4)ALAASK1	2124.37	1008.04	2635.01
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	TQCALAASK	TQC(UniMod:4)ALAASK	2	TQC(UniMod:4)ALAASK2	89680.2	59048.3	55431.1
A0A0G2K975	A0A0G2K975	A0A0G2K975_RAT	Cfhr4	Similar to complement factor H-related protein	1	TQCIDGHINYPTCSK	TQC(UniMod:4)IDGHINYPTC(UniMod:4)SK	3	TQC(UniMod:4)IDGHINYPTC(UniMod:4)SK3	3428.63	2598.96	936.444
P23785	P23785	GRN_RAT	Grn	Progranulin	1	TQCPDDSTCCELPTGK	TQC(UniMod:4)PDDSTC(UniMod:4)C(UniMod:4)ELPTGK	2	TQC(UniMod:4)PDDSTC(UniMod:4)C(UniMod:4)ELPTGK2	277537	201656	231875
P23785	P23785	GRN_RAT	Grn	Progranulin	1	TQCPDDSTCCELPTGK	TQC(UniMod:4)PDDSTC(UniMod:4)C(UniMod:4)ELPTGK	3	TQC(UniMod:4)PDDSTC(UniMod:4)C(UniMod:4)ELPTGK3	35301	39884.7	26383.8
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	TQCPVFAEVGCSPCGTSDQK	TQC(UniMod:4)PVFAEVGC(UniMod:4)SPC(UniMod:4)GTSDQK	3	TQC(UniMod:4)PVFAEVGC(UniMod:4)SPC(UniMod:4)GTSDQK3	4539.1	4634.43	
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	TQDAAGPELMLPASIEFR	TQDAAGPELMLPASIEFR	2	TQDAAGPELMLPASIEFR2	7773.75	4902.81	7085.1
D3ZAS9	D3ZAS9	D3ZAS9_RAT	Ddrgk1	DDRGK domain-containing protein 1	1	TQDAINR	TQDAINR	2	TQDAINR2	38436.7		39519.4
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	TQDDDTVNK	TQDDDTVNK	2	TQDDDTVNK2			8448.21
Q5M890	Q5M890	Q5M890_RAT	Apon	Apolipoprotein N	1	TQDGGLPHQPAGTETEPTQLLYSK	TQDGGLPHQPAGTETEPTQLLYSK	3	TQDGGLPHQPAGTETEPTQLLYSK3	202242	203215	208728
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	TQDIAVISAK	TQDIAVISAK	2	TQDIAVISAK2	15398	12935.3	17122.2
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	TQDIFEDDIFATEAIK	TQDIFEDDIFATEAIK	2	TQDIFEDDIFATEAIK2	4035.32		
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	TQDIFEDDIFATEAIK	TQDIFEDDIFATEAIK	3	TQDIFEDDIFATEAIK3	4321.77		2910.59
D4ABB8	D4ABB8	ATP9B_RAT	Atp9b	Probable phospholipid-transporting ATPase IIB	1	TQDIHIFRPVTNR	TQDIHIFRPVTNR	3	TQDIHIFRPVTNR3		4733.78	
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	TQDKEIVVLGMLR	TQDKEIVVLGMLR	2	TQDKEIVVLGMLR2	990.255	1633.13	1341.21
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	TQDKEIVVLGMLR	TQDKEIVVLGMLR	3	TQDKEIVVLGMLR3	69517.1	85536.5	74585.5
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	TQDPCSAPQTR	TQDPC(UniMod:4)SAPQTR	2	TQDPC(UniMod:4)SAPQTR2	288739		280767
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	TQDPNTIFR	TQDPNTIFR	2	TQDPNTIFR2	353821	321559	292568
Q99MZ8	Q99MZ8	LASP1_RAT	Lasp1	LIM and SH3 domain protein 1	1	TQDQISNIK	TQDQISNIK	2	TQDQISNIK2	262594	215588	146952
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	TQDQLPAYPEK	TQDQLPAYPEK	2	TQDQLPAYPEK2	50718.9	45459.7	39943.7
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	TQDRETALQLAIK	TQDRETALQLAIK	3	TQDRETALQLAIK3	28465.6	30927.8	30568.5
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	TQDVFTVIR	TQDVFTVIR	2	TQDVFTVIR2	29402.6	30289.8	28831.3
D4A0G9	D4A0G9	D4A0G9_RAT	Ercc6l	ERCC excision repair 6 like, spindle assembly checkpoint helicase	1	TQEALNCLVK	TQEALNC(UniMod:4)LVK	2	TQEALNC(UniMod:4)LVK2	9162.68	3603.63	4066.56
A0A8I6GIL4	A0A8I6GIL4	A0A8I6GIL4_RAT	Tmem87a	Transmembrane protein 87A	1	TQEDDLK	TQEDDLK	2	TQEDDLK2	17306.3	20922.7	26904.9
D3ZR63	D3ZR63	D3ZR63_RAT	Gfod1	Glucose-fructose oxidoreductase domain containing 1	1	TQEEAEELAK	TQEEAEELAK	2	TQEEAEELAK2	2829.22	9003.12	12635.3
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	TQEEAPSDLNPPPAEPEEHLGDLR	TQEEAPSDLNPPPAEPEEHLGDLR	3	TQEEAPSDLNPPPAEPEEHLGDLR3	106429	129480	123726
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	TQEEIVAK	TQEEIVAK	1	TQEEIVAK1	27864.6	24184.3	25137.4
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	TQEEIVAK	TQEEIVAK	2	TQEEIVAK2	1.61707e+06	1.57811e+06	1.7076e+06
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	TQEELVAMLR	TQEELVAMLR	2	TQEELVAMLR2	6539.18	5807.55	11551.9
P08462	P08462	GRPB_RAT	Grpcb	Submandibular gland secretory Glx-rich protein CB	1	TQEEPQHYR	TQEEPQHYR	2	TQEEPQHYR2			2984.83
P08462	P08462	GRPB_RAT	Grpcb	Submandibular gland secretory Glx-rich protein CB	1	TQEEPQHYR	TQEEPQHYR	3	TQEEPQHYR3			169924
Q811U3	Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	1	TQEEVAALK	TQEEVAALK	2	TQEEVAALK2	8637.44	12016.9	5575.04
P07872	P07872	ACOX1_RAT	Acox1	Peroxisomal acyl-coenzyme A oxidase 1	1	TQEFILNSPTVTSIK	TQEFILNSPTVTSIK	2	TQEFILNSPTVTSIK2	23305.8	24487.1	18673.8
D3ZSY8	D3ZSY8	D3ZSY8_RAT	Tbc1d10b	TBC1 domain family, member 10b	1	TQEFPAPAAEAGAETSVALVLGTDTPK	TQEFPAPAAEAGAETSVALVLGTDTPK	3	TQEFPAPAAEAGAETSVALVLGTDTPK3	4771.05	11628.2	2436.76
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	TQEFPHILTLIGR	TQEFPHILTLIGR	3	TQEFPHILTLIGR3	29962.1	25960.7	26307.8
P63329	P63329	PP2BA_RAT	Ppp3ca	Protein phosphatase 3 catalytic subunit alpha	1	TQEHFTHNTVR	TQEHFTHNTVR	2	TQEHFTHNTVR2			6996.3
P63329	P63329	PP2BA_RAT	Ppp3ca	Protein phosphatase 3 catalytic subunit alpha	1	TQEHFTHNTVR	TQEHFTHNTVR	3	TQEHFTHNTVR3	16298.8		6438.38
D3ZDR7	D3ZDR7	D3ZDR7_RAT	Themis2	Thymocyte selection associated family member 2	1	TQEIILHLPLSQK	TQEIILHLPLSQK	3	TQEIILHLPLSQK3	11036.4	11779.5	9930.98
Q9ESH6	Q6AY00;Q9ESH6	GLRX1_RAT	Glrx	Glutaredoxin-1	0	TQEILSQLPFK	TQEILSQLPFK	2	TQEILSQLPFK2	16812.2	13124.9	17847
Q9ESH6	Q9ESH6	GLRX1_RAT	Glrx	Glutaredoxin-1	1	TQEILSQLPFKR	TQEILSQLPFKR	3	TQEILSQLPFKR3	5901.08	9110.28	11128.2
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	TQEKEEMMQTLNK	TQEKEEMMQTLNK	2	TQEKEEMMQTLNK2	1553.74	2683.56	1261.59
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	TQEKEEMMQTLNK	TQEKEEMMQTLNK	3	TQEKEEMMQTLNK3	35897.1	34498.2	31590.3
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	TQELAFATHQDPADPK	TQELAFATHQDPADPK	2	TQELAFATHQDPADPK2	3592.27	1643.66	5005.76
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	TQELAFATHQDPADPK	TQELAFATHQDPADPK	3	TQELAFATHQDPADPK3	5818.16	7682.99	20147.7
Q5BJM5	Q5BJM5	PKHO1_RAT	Plekho1	Pleckstrin homology domain-containing family O member 1	1	TQELLAEVQGLGDGK	TQELLAEVQGLGDGK	2	TQELLAEVQGLGDGK2	6601	15734.7	7752.32
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	TQELNMLR	TQELNMLR	2	TQELNMLR2	44788.8	36219.1	32643.9
O54783	O54783	CHKB_RAT	Chkb	Choline/ethanolamine kinase	1	TQELRDPVLSGAIATK	TQELRDPVLSGAIATK	3	TQELRDPVLSGAIATK3	5575.28	6999.92	7256.18
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	TQEPLPSELSLAAGDMERPSSSR	TQEPLPSELSLAAGDMERPSSSR	3	TQEPLPSELSLAAGDMERPSSSR3	34677.1	41956.7	26164.4
Q64686	Q64686	SIA7C_RAT	St6galnac3	Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	1	TQEPLQLNCNHCAVVSNSGQMVGQK	TQEPLQLNC(UniMod:4)NHC(UniMod:4)AVVSNSGQMVGQK	3	TQEPLQLNC(UniMod:4)NHC(UniMod:4)AVVSNSGQMVGQK3		2395.09	
O35763	O35763	MOES_RAT	Msn	Moesin	1	TQEQLASEMAELTAR	TQEQLASEMAELTAR	2	TQEQLASEMAELTAR2	34507.3	37961.5	32906.7
O35763	O35763	MOES_RAT	Msn	Moesin	1	TQEQLASEMAELTAR	TQEQLASEMAELTAR	3	TQEQLASEMAELTAR3	24740.1	40580.8	27310.4
G3V8Y8	G3V8Y8	G3V8Y8_RAT	Hip1	Huntingtin interacting protein 1	1	TQEQQDVLETLK	TQEQQDVLETLK	2	TQEQQDVLETLK2	3572.24	3322.22	
Q498R7	Q498R7	CZIB_RAT	Czib	CXXC motif containing zinc binding protein	1	TQESVGIFEVTHQFVK	TQESVGIFEVTHQFVK	3	TQESVGIFEVTHQFVK3	3317.79	2954.23	4506.93
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	TQESWNAFLTK	TQESWNAFLTK	2	TQESWNAFLTK2	2860.7	5290.01	2698.33
Q6PCT3	Q6PCT3	TPD54_RAT	Tpd52l2	Tumor protein D54	1	TQETLSQAGQK	TQETLSQAGQK	2	TQETLSQAGQK2	15265	11214.5	14485.7
A0A0G2K4H7	A0A0G2K4H7	A0A0G2K4H7_RAT	Krt78	Keratin 78	1	TQETQEIR	TQETQEIR	2	TQETQEIR2	58536.1	40111	
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	TQEVCCR	TQEVC(UniMod:4)C(UniMod:4)R	2	TQEVC(UniMod:4)C(UniMod:4)R2			32456.2
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	TQEVLDK	TQEVLDK	2	TQEVLDK2	61421	62232.4	56439.1
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	TQEVLDKDGWLHTGDIGR	TQEVLDKDGWLHTGDIGR	3	TQEVLDKDGWLHTGDIGR3	25384.5	25555.1	15202.3
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	TQEVLDKDGWLHTGDIGR	TQEVLDKDGWLHTGDIGR	4	TQEVLDKDGWLHTGDIGR4	39221.1	59970.2	51428
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	TQFEDSTVLTIAHR	TQFEDSTVLTIAHR	2	TQFEDSTVLTIAHR2	1498.52	2266.58	2304.23
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	TQFEDSTVLTIAHR	TQFEDSTVLTIAHR	3	TQFEDSTVLTIAHR3	24549	23781	25582
E9PU10	E9PU10	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	1	TQFLNVVVEDAK	TQFLNVVVEDAK	2	TQFLNVVVEDAK2	82085.3	104280	84003
D4AB06	D4AB06	D4AB06_RAT	Haus5	HAUS augmin-like complex, subunit 5	1	TQFLQNLLTPQAR	TQFLQNLLTPQAR	2	TQFLQNLLTPQAR2	7406.55	4464.93	6374.74
Q91XJ1	Q91XJ1	BECN1_RAT	Becn1	Beclin-1	1	TQFNSEEQWTK	TQFNSEEQWTK	2	TQFNSEEQWTK2	6187.03	2020.38	8606.06
Q9WUD9	Q9WUD9	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	1	TQFNSLQQLVAYYSK	TQFNSLQQLVAYYSK	2	TQFNSLQQLVAYYSK2	103607	74839.7	70420.9
Q9WUD9	Q9WUD9	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	1	TQFNSLQQLVAYYSK	TQFNSLQQLVAYYSK	3	TQFNSLQQLVAYYSK3	41681.8	46095.4	59818.3
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	TQFSDVLDLYLGNHFK	TQFSDVLDLYLGNHFK	3	TQFSDVLDLYLGNHFK3	3202.16		
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	TQFVSPWR	TQFVSPWR	2	TQFVSPWR2	21836.9	28235.9	33256.4
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	TQFVSPWREDDGVEDNEK	TQFVSPWREDDGVEDNEK	3	TQFVSPWREDDGVEDNEK3	189525	173463	219986
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	TQGELYMWDSIDQK	TQGELYMWDSIDQK	2	TQGELYMWDSIDQK2	27158.7	35709	25833
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	TQGFLALFSGDTGEIK	TQGFLALFSGDTGEIK	2	TQGFLALFSGDTGEIK2	26110.5	22106.1	45017.8
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	TQGFLALFSGDTGEIK	TQGFLALFSGDTGEIK	3	TQGFLALFSGDTGEIK3	3241.54	3229.15	2432.5
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	TQGGAASPPEVQAEELSK	TQGGAASPPEVQAEELSK	2	TQGGAASPPEVQAEELSK2	19003.1	15969.7	15309.1
A0A8I5ZM64	A0A8I5ZM64	A0A8I5ZM64_RAT	Rcbtb1	RCC1 and BTB domain containing protein 1	1	TQGGHVYMWGQCR	TQGGHVYMWGQC(UniMod:4)R	3	TQGGHVYMWGQC(UniMod:4)R3	5266.28	1398.79	2991.36
F1MAA4	F1MAA4	F1MAA4_RAT	Atp13a2	ATPase cation transporting 13A2	1	TQGIFCIHPLR	TQGIFC(UniMod:4)IHPLR	3	TQGIFC(UniMod:4)IHPLR3	6346	13330.2	13027.3
B2RYG8	B2RYG8	ELP6_RAT	Elp6	Elongator complex protein 6	1	TQGLATGFCK	TQGLATGFC(UniMod:4)K	2	TQGLATGFC(UniMod:4)K2	7826.24	8263.69	7399.5
A0A8I5Y8A9	A0A8I5Y8A9	A0A8I5Y8A9_RAT	Gltpd2	Glycolipid transfer protein domain containing 2	1	TQGLLASHGLLQLA	TQGLLASHGLLQLA	2	TQGLLASHGLLQLA2	18277	13936.1	18792.7
B4F767	B4F767	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	1	TQGMIQEPALPPGWEMK	TQGMIQEPALPPGWEMK	2	TQGMIQEPALPPGWEMK2	7643.17	15817.3	10420.1
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	TQGNVFATDAILATLMSCTR	TQGNVFATDAILATLMSC(UniMod:4)TR	3	TQGNVFATDAILATLMSC(UniMod:4)TR3	17328.1	20571.3	14355.6
A0A8I6ACU9	A0A8I6ACU9	A0A8I6ACU9_RAT	Timm50	Mitochondrial import inner membrane translocase subunit TIM50	1	TQGPQHQPGSEGPSYAK	TQGPQHQPGSEGPSYAK	3	TQGPQHQPGSEGPSYAK3	23614.8	8757.49	24210.2
O88767	O88767	PARK7_RAT	Park7	Parkinson disease protein 7 homolog	1	TQGPYDVVVLPGGNLGAQNLSESALVK	TQGPYDVVVLPGGNLGAQNLSESALVK	3	TQGPYDVVVLPGGNLGAQNLSESALVK3	11862.2	11160.9	19068.5
F1M7Z1	F1M7Z1	F1M7Z1_RAT	Edc3	Enhancer of mRNA-decapping protein 3	1	TQGQQVSSLR	TQGQQVSSLR	2	TQGQQVSSLR2	21611.1	24467.3	21464.9
O88387	O88387	FGD4_RAT	Fgd4	FYVE, RhoGEF and PH domain-containing protein 4	1	TQGTDLGLPSK	TQGTDLGLPSK	2	TQGTDLGLPSK2	5708.52	4065.31	
Q08850	Q08850	STX4_RAT	Stx4	Syntaxin-4	1	TQHGVLSQQFVELINK	TQHGVLSQQFVELINK	2	TQHGVLSQQFVELINK2		1706.99	2728.15
Q08850	Q08850	STX4_RAT	Stx4	Syntaxin-4	1	TQHGVLSQQFVELINK	TQHGVLSQQFVELINK	3	TQHGVLSQQFVELINK3	17578.5	11517.6	13449.2
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	TQHIGNQEENK	TQHIGNQEENK	2	TQHIGNQEENK2			13330.7
Q4V7D3	Q4V7D3	MACOI_RAT	Maco1	Macoilin	1	TQHLENSLSAETR	TQHLENSLSAETR	3	TQHLENSLSAETR3	7211.41		
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	TQHLSNDHICYFLYQILR	TQHLSNDHIC(UniMod:4)YFLYQILR	3	TQHLSNDHIC(UniMod:4)YFLYQILR3	1781.49	11822.2	
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	TQHLSNDHICYFLYQILR	TQHLSNDHIC(UniMod:4)YFLYQILR	4	TQHLSNDHIC(UniMod:4)YFLYQILR4	184206	77062.9	51510.4
Q5XIM0	Q5XIM0	Q5XIM0_RAT	Bcs1l	Mitochondrial chaperone BCS1	1	TQHLSVETSYLQHESGR	TQHLSVETSYLQHESGR	4	TQHLSVETSYLQHESGR4	22678.6	12102	11090.5
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	TQHNGMNNIIR	TQHNGMNNIIR	3	TQHNGMNNIIR3	8544.63	12055.6	15489.5
B2RYF7	B2RYF7	WASH1_RAT	Washc1	WASH complex subunit 1	1	TQHSLAGQVYAVPLIQPDLR	TQHSLAGQVYAVPLIQPDLR	3	TQHSLAGQVYAVPLIQPDLR3	14867.6	13061.2	14784.6
B2RYF7	B2RYF7	WASH1_RAT	Washc1	WASH complex subunit 1	1	TQHSLAGQVYAVPLIQPDLRR	TQHSLAGQVYAVPLIQPDLRR	4	TQHSLAGQVYAVPLIQPDLRR4	4885.59	4845.32	5039.07
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	TQIADAK	TQIADAK	1	TQIADAK1	2.24555e+06		1.49191e+06
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	TQIADAKR	TQIADAKR	2	TQIADAKR2			560605
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	TQIAICPNNHEVHIYEK	TQIAIC(UniMod:4)PNNHEVHIYEK	3	TQIAIC(UniMod:4)PNNHEVHIYEK3	126226	84823.6	89586.7
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	TQIAICPNNHEVHIYEK	TQIAIC(UniMod:4)PNNHEVHIYEK	4	TQIAIC(UniMod:4)PNNHEVHIYEK4	322220	312769	333920
Q99PD4	Q99PD4	ARC1A_RAT	Arpc1a	Actin-related protein 2/3 complex subunit 1A	1	TQIALSPNNHEVHIYK	TQIALSPNNHEVHIYK	3	TQIALSPNNHEVHIYK3	47249.2	29129.6	35027.8
Q99PD4	Q99PD4	ARC1A_RAT	Arpc1a	Actin-related protein 2/3 complex subunit 1A	1	TQIALSPNNHEVHIYK	TQIALSPNNHEVHIYK	4	TQIALSPNNHEVHIYK4	79185.4	74443	76924.6
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	TQIDELLR	TQIDELLR	2	TQIDELLR2	15018	15971.9	13450.2
Q6RJR6	Q6RJR6	RTN3_RAT	Rtn3	Reticulon-3	1	TQIDHYVGIAR	TQIDHYVGIAR	2	TQIDHYVGIAR2	99086	114798	88284.3
Q6RJR6	Q6RJR6	RTN3_RAT	Rtn3	Reticulon-3	1	TQIDHYVGIAR	TQIDHYVGIAR	3	TQIDHYVGIAR3	2.31796e+06	2.48662e+06	2.38557e+06
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	TQIDSPLNGK	TQIDSPLNGK	2	TQIDSPLNGK2	231364	217618	216709
Q5XI86	Q5XI86	Q5XI86_RAT	Ptrh2	aminoacyl-tRNA hydrolase	1	TQIEPGSR	TQIEPGSR	2	TQIEPGSR2	101401	93459.5	84908.9
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TQIHNIDIQQLAAELK	TQIHNIDIQQLAAELK	2	TQIHNIDIQQLAAELK2	16821.3	19114	11369.9
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TQIHNIDIQQLAAELK	TQIHNIDIQQLAAELK	3	TQIHNIDIQQLAAELK3	241510	279402	248347
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	TQILAASYELHK	TQILAASYELHK	2	TQILAASYELHK2	73661.3	93525.3	70409
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	TQILAASYELHK	TQILAASYELHK	3	TQILAASYELHK3	339241	347334	338396
Q6Q3E8	Q6Q3E8	Q6Q3E8_RAT	Eng	Endoglin	1	TQILDWAATK	TQILDWAATK	2	TQILDWAATK2	5844.66	12301.7	9524.11
Q63621	Q63621	IL1AP_RAT	Il1rap	Interleukin-1 receptor accessory protein	1	TQILSIK	TQILSIK	2	TQILSIK2	62957.4	62815.1	60126.4
Q63621	Q63621	IL1AP_RAT	Il1rap	Interleukin-1 receptor accessory protein	1	TQILSIKK	TQILSIKK	2	TQILSIKK2	3699.5	4948.19	4207.52
Q5XIG6	Q5XIG6	GALK2_RAT	Galk2	N-acetylgalactosamine kinase	1	TQILSPNTQGELTFK	TQILSPNTQGELTFK	2	TQILSPNTQGELTFK2	8815.15	7932.2	7090.29
P70569	P70569	MYO5B_RAT	Myo5b	Unconventional myosin-Vb	1	TQIMNADQR	TQIMNADQR	2	TQIMNADQR2	16089.3	14949.5	10365.9
P18420	P18420	PSA1_RAT	Psma1	Proteasome subunit alpha type-1	1	TQIPTQR	TQIPTQR	2	TQIPTQR2	4.71873e+06	5.3346e+06	5.94321e+06
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	TQIQSQESDLK	TQIQSQESDLK	2	TQIQSQESDLK2	25013.4	27608.8	19622.4
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	TQIQSVEPYTK	TQIQSVEPYTK	2	TQIQSVEPYTK2	58816	65972.9	57618.3
A0A8I6AA62	A0A8I6AA62	A0A8I6AA62_RAT	Ofd1	OFD1, centriole and centriolar satellite protein	1	TQISEYDASVK	TQISEYDASVK	2	TQISEYDASVK2	1583.6		3318.89
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	TQIYSDPLR	TQIYSDPLR	2	TQIYSDPLR2	8664.4		5487.8
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	TQKDPSTKPVTSPPSK	TQKDPSTKPVTSPPSK	3	TQKDPSTKPVTSPPSK3			3622.83
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	TQKDPSTKPVTSPPSK	TQKDPSTKPVTSPPSK	4	TQKDPSTKPVTSPPSK4			9473.54
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	TQLAVCQQR	TQLAVC(UniMod:4)QQR	2	TQLAVC(UniMod:4)QQR2	21401	28052.3	29299
Q62812	Q63862;Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	TQLEELEDELQATEDAK	TQLEELEDELQATEDAK	3	TQLEELEDELQATEDAK3	3.44876e+06	4.39551e+06	4.24606e+06
M0R7V3	M0R7V3	M0R7V3_RAT	Apoo	MICOS complex subunit	1	TQLEENISELR	TQLEENISELR	2	TQLEENISELR2	13522.5	12199	10992.4
A0A8I6ACY0	A0A8I6ACY0	A0A8I6ACY0_RAT	Dennd2d	DENN domain containing 2D	1	TQLFSLFIQEAEK	TQLFSLFIQEAEK	2	TQLFSLFIQEAEK2	5061.41	7458.79	2536.39
A0A0G2JSI4	A0A0G2JSI4	A0A0G2JSI4_RAT	Adgre5	Adhesion G protein-coupled receptor E5	1	TQLGDSGER	TQLGDSGER	2	TQLGDSGER2	308650	297292	267687
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	TQLGLVMDGFNSLLR	TQLGLVMDGFNSLLR	2	TQLGLVMDGFNSLLR2	90195.4	81966.9	88291.9
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	TQLGLVMDGFNSLLR	TQLGLVMDGFNSLLR	3	TQLGLVMDGFNSLLR3	50090.3	31376	49956.4
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	TQLIFGSVTNIHAK	TQLIFGSVTNIHAK	3	TQLIFGSVTNIHAK3	1895.16		
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	TQLIQLSTLLR	TQLIQLSTLLR	2	TQLIQLSTLLR2	10711.1	10683.1	11029.9
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	TQLISDGGIFDQVVSTGGGGHVQLLTR	TQLISDGGIFDQVVSTGGGGHVQLLTR	3	TQLISDGGIFDQVVSTGGGGHVQLLTR3	69575.1	63853.6	73397.2
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	TQLISDGGIFDQVVSTGGGGHVQLLTR	TQLISDGGIFDQVVSTGGGGHVQLLTR	4	TQLISDGGIFDQVVSTGGGGHVQLLTR4	18639.4	20136.2	16555.7
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	TQLLAELGK	TQLLAELGK	2	TQLLAELGK2	7392.75	7810.6	
A0A8I5ZKH1	A0A8I5ZKH1	A0A8I5ZKH1_RAT	Ythdc2	RNA helicase	1	TQLLGQLR	TQLLGQLR	2	TQLLGQLR2		7276.55	5374.26
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	TQLNLLLDK	TQLNLLLDK	2	TQLNLLLDK2	57021.6	48104.5	41227.6
O08679	O08679	MARK2_RAT	Mark2	Serine/threonine-protein kinase MARK2	1	TQLNSSSLQK	TQLNSSSLQK	2	TQLNSSSLQK2	25331.5	14653.3	23120
Q4KLL4	Q4KLL4	TM9S4_RAT	Tm9sf4	Transmembrane 9 superfamily member 4	1	TQLPYEYYSLPFCQPNK	TQLPYEYYSLPFC(UniMod:4)QPNK	3	TQLPYEYYSLPFC(UniMod:4)QPNK3	54472.5	58038.7	51524.9
P32089	P32089	TXTP_RAT	Slc25a1	Tricarboxylate transport protein, mitochondrial	1	TQLQLDER	TQLQLDER	2	TQLQLDER2	144702	135208	153480
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	TQLQLLQK	TQLQLLQK	2	TQLQLLQK2	13795.6	10487	4325.63
A0A0G2JTX7	A0A0G2JTX7	A0A0G2JTX7_RAT	Col6a5	Collagen type VI alpha 5 chain	1	TQLQQIAGK	TQLQQIAGK	2	TQLQQIAGK2	6061.84	3483.2	6398.05
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	TQLTLYESALR	TQLTLYESALR	2	TQLTLYESALR2	136472	145950	128856
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	TQLVEQFK	TQLVEQFK	2	TQLVEQFK2	121857	114825	140086
P00507	A0A8I6GJD2;P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	0	TQLVSNLK	TQLVSNLK	2	TQLVSNLK2	325849	356123	359698
P00507	A0A8I6GJD2;P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	0	TQLVSNLKK	TQLVSNLKK	2	TQLVSNLKK2	42872.8	45767.3	39859.4
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	TQLWEAQAEMENIK	TQLWEAQAEMENIK	2	TQLWEAQAEMENIK2	12840.4	15926.1	9187.75
D3ZZL9	D3ZZL9	GCC2_RAT	Gcc2	GRIP and coiled-coil domain-containing protein 2	1	TQLYEFLK	TQLYEFLK	2	TQLYEFLK2	4319.66		
D3ZLT7	D3ZLT7	D3ZLT7_RAT	Kiaa2013	Similar to RIKEN cDNA 2510039O18	1	TQMDETVLWVVHVSAPIHPQVLK	TQMDETVLWVVHVSAPIHPQVLK	4	TQMDETVLWVVHVSAPIHPQVLK4	4947.52	3877.18	5268.24
Q32KJ5	Q32KJ5	Q32KJ5_RAT	Gns	N-acetylglucosamine-6-sulfatase	1	TQMDGTSLLPILK	TQMDGTSLLPILK	2	TQMDGTSLLPILK2	25938.1	23529.8	28402.7
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	TQMKPGVVPGCEPCR	TQMKPGVVPGC(UniMod:4)EPC(UniMod:4)R	3	TQMKPGVVPGC(UniMod:4)EPC(UniMod:4)R3	3260.65	7349.59	3586.34
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	TQMLDQEELLASTR	TQMLDQEELLASTR	2	TQMLDQEELLASTR2	100552	111449	108204
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	TQMLDQEELLASTR	TQMLDQEELLASTR	3	TQMLDQEELLASTR3	28448.4	24788.1	26172.7
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	TQMLDQEELLASTRR	TQMLDQEELLASTRR	3	TQMLDQEELLASTRR3	9229.47	23322.6	33451.5
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	TQMLVTTPEK	TQMLVTTPEK	2	TQMLVTTPEK2	26378.9	25421.8	17559.7
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	TQMMDLELAMLR	TQMMDLELAMLR	2	TQMMDLELAMLR2	16178.9	16285.3	13663.7
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	TQMQEAMTQEVSDVFSDTTTPIK	TQMQEAMTQEVSDVFSDTTTPIK	3	TQMQEAMTQEVSDVFSDTTTPIK3	154761	119153	125216
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	TQMQQGLISIAAR	TQMQQGLISIAAR	2	TQMQQGLISIAAR2	5021.24	4347.46	9333.11
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	TQMSSCVAK	TQMSSC(UniMod:4)VAK	2	TQMSSC(UniMod:4)VAK2	122107	84939.9	103314
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	TQMTDDICR	TQMTDDIC(UniMod:4)R	2	TQMTDDIC(UniMod:4)R2	1.83481e+07	1.75863e+07	2.10315e+07
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	TQMTDDICRSWPSFPWQVR	TQMTDDIC(UniMod:4)RSWPSFPWQVR	3	TQMTDDIC(UniMod:4)RSWPSFPWQVR3	8780.03	19215.1	12953.3
Q5PQK5	Q5PQK5	Q5PQK5_RAT	Rdx	Radixin	1	TQNDVLHAENVK	TQNDVLHAENVK	3	TQNDVLHAENVK3	2343.37	2057.37	1109.02
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	TQNINSNANMLR	TQNINSNANMLR	2	TQNINSNANMLR2		28235.9	32842.5
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	TQNMALALQLK	TQNMALALQLK	2	TQNMALALQLK2	7069.43	8687.34	6081.53
P34067	P34067	PSB4_RAT	Psmb4	Proteasome subunit beta type-4	1	TQNPMVTGTSVLGVK	TQNPMVTGTSVLGVK	2	TQNPMVTGTSVLGVK2	1.21422e+06	1.22153e+06	1.41036e+06
P34067	P34067	PSB4_RAT	Psmb4	Proteasome subunit beta type-4	1	TQNPMVTGTSVLGVK	TQNPMVTGTSVLGVK	3	TQNPMVTGTSVLGVK3	214325	200708	220072
P10716	P10716	CLC4F_RAT	Clec4f	C-type lectin domain family 4 member F	1	TQNQVLQLIMQDWK	TQNQVLQLIMQDWK	2	TQNQVLQLIMQDWK2	2259.31	2359.76	5091.35
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	TQPAQPVVPEK	TQPAQPVVPEK	2	TQPAQPVVPEK2	54700.4	45731.8	45257.6
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	TQPESSSMLR	TQPESSSMLR	2	TQPESSSMLR2	89827.1	102879	84220.7
A0A0G2JZH0	A0A0G2JZH0	A0A0G2JZH0_RAT	Cab39	Calcium binding protein 39	1	TQPILDILLK	TQPILDILLK	2	TQPILDILLK2	40510.4	26339.1	46193.4
D4ADT7	D4ADT7	D4ADT7_RAT	Nod1	Nucleotide-binding oligomerization domain containing 1	1	TQPISLMQR	TQPISLMQR	2	TQPISLMQR2	25648.5	25876.7	15958
A0A8I6AE33	A0A8I6AE33	A0A8I6AE33_RAT	Wdr37	WD repeat domain 37	1	TQPIVLGTASADHTALLWSIETGK	TQPIVLGTASADHTALLWSIETGK	3	TQPIVLGTASADHTALLWSIETGK3	36653.5	39651.1	41356.9
D4A0J7	D4A0J7	D4A0J7_RAT	Olfml2b	Olfactomedin-like 2B	1	TQPLAPPTVMKPR	TQPLAPPTVMKPR	3	TQPLAPPTVMKPR3	38242.9	53570.3	41946.7
Q68FS3	Q68FS3	FBX7_RAT	Fbxo7	F-box only protein 7	1	TQPLEVPESEPTLGQLR	TQPLEVPESEPTLGQLR	2	TQPLEVPESEPTLGQLR2	49171.9	48042.2	45303.6
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	TQPPEDISCIAWNR	TQPPEDISC(UniMod:4)IAWNR	2	TQPPEDISC(UniMod:4)IAWNR2	124626	138920	123079
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	TQPPEDISCIAWNR	TQPPEDISC(UniMod:4)IAWNR	3	TQPPEDISC(UniMod:4)IAWNR3	23076.4	29673.9	31975.3
A0A8I6GBD2	A0A8I6GBD2	A0A8I6GBD2_RAT	Actr10	Actin related protein 10	1	TQPPLMK	TQPPLMK	2	TQPPLMK2	196969	178321	189470
P11030	P11030	ACBP_RAT	Dbi	Acyl-CoA-binding protein	1	TQPTDEEMLFIYSHFK	TQPTDEEMLFIYSHFK	3	TQPTDEEMLFIYSHFK3	5330.89	6558.91	9204.03
Q641Y2	Q641Y2	NDUS2_RAT	Ndufs2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	1	TQPYDVYDQVEFDVPIGSR	TQPYDVYDQVEFDVPIGSR	3	TQPYDVYDQVEFDVPIGSR3	13816.5	13341.3	9297.08
Q4FZV0	Q4FZV0	MANBA_RAT	Manba	Beta-mannosidase	1	TQQANHIELQHGQR	TQQANHIELQHGQR	4	TQQANHIELQHGQR4		23064.6	23604.8
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	TQQDRPEICFMK	TQQDRPEIC(UniMod:4)FMK	2	TQQDRPEIC(UniMod:4)FMK2	1894.85	2374.54	
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	TQQDRPEICFMK	TQQDRPEIC(UniMod:4)FMK	3	TQQDRPEIC(UniMod:4)FMK3	125104	164856	130716
Q561Q9	Q561Q9	Q561Q9_RAT	Ctsw	Cathepsin W	1	TQQFVDVSVQELLDCDR	TQQFVDVSVQELLDC(UniMod:4)DR	3	TQQFVDVSVQELLDC(UniMod:4)DR3	3726.6	12125.3	7238.24
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	TQQGVPAQPADFQAK	TQQGVPAQPADFQAK	2	TQQGVPAQPADFQAK2	23747.1	13548.5	19437.5
Q64605	Q64605	PTPRS_RAT	Ptprs	Receptor-type tyrosine-protein phosphatase S	1	TQQGVPGQPMNLR	TQQGVPGQPMNLR	2	TQQGVPGQPMNLR2	7644.19	8488.9	13694.9
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	TQQHYYDK	TQQHYYDK	2	TQQHYYDK2			3038.52
D3ZU52	D3ZU52	D3ZU52_RAT	Cops7b	COP9 signalosome subunit 7B	1	TQQQVEAEVSNIK	TQQQVEAEVSNIK	2	TQQQVEAEVSNIK2	24572.7	21208.3	22058.4
D3ZU52	D3ZU52	D3ZU52_RAT	Cops7b	COP9 signalosome subunit 7B	1	TQQQVEAEVSNIKK	TQQQVEAEVSNIKK	2	TQQQVEAEVSNIKK2	1116.86	3203.37	
D3ZU52	D3ZU52	D3ZU52_RAT	Cops7b	COP9 signalosome subunit 7B	1	TQQQVEAEVSNIKK	TQQQVEAEVSNIKK	3	TQQQVEAEVSNIKK3	27928.2	26166.6	30940.6
D3Z9Y3	D3Z9Y3	D3Z9Y3_RAT	Cerk	Ceramide kinase	1	TQQSAGVDPNHPR	TQQSAGVDPNHPR	3	TQQSAGVDPNHPR3	5686.93		10911.8
A0A8I5Y8A9	A0A8I5Y8A9	A0A8I5Y8A9_RAT	Gltpd2	Glycolipid transfer protein domain containing 2	1	TQQSGLWELK	TQQSGLWELK	2	TQQSGLWELK2	29097.8	31722.2	30295.9
F1LP44	F1LP44	F1LP44_RAT	Itgal	Integrin subunit alpha L	1	TQQVQHIYK	TQQVQHIYK	2	TQQVQHIYK2	903.734		1290.4
A0A8I6GBQ0	A0A8I6GBQ0	A0A8I6GBQ0_RAT	Stk26	Protein kinase domain-containing protein	1	TQQVVAIK	TQQVVAIK	1	TQQVVAIK1	2051.72	1333.28	4773.06
A0A8I6GBQ0	A0A8I6GBQ0	A0A8I6GBQ0_RAT	Stk26	Protein kinase domain-containing protein	1	TQQVVAIK	TQQVVAIK	2	TQQVVAIK2	154394	189077	159545
D3ZRI9	D3ZRI9	D3ZRI9_RAT	Gan	Gigaxonin	1	TQQWTAICPLK	TQQWTAIC(UniMod:4)PLK	2	TQQWTAIC(UniMod:4)PLK2	10778.6	10647.3	6316.56
Q56AP7	Q56AP7	CRBN_RAT	Crbn	Protein cereblon	1	TQSDGIQQAK	TQSDGIQQAK	2	TQSDGIQQAK2			10600
Q9ESS6	Q9ESS6	BCAM_RAT	Bcam	Basal cell adhesion molecule	1	TQSFQLVVQGAPELKPNEIKPK	TQSFQLVVQGAPELKPNEIKPK	4	TQSFQLVVQGAPELKPNEIKPK4	5746.36	3855.01	2940.61
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	TQSFVAK	TQSFVAK	2	TQSFVAK2	107696	109625	116667
A0A8I5ZVX1	A0A8I5ZVX1	A0A8I5ZVX1_RAT	Ppfibp2	PPFIA binding protein 2	1	TQSGNFNTDTPGMVEFR	TQSGNFNTDTPGMVEFR	2	TQSGNFNTDTPGMVEFR2	4463.24	2159.83	3571.28
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	TQSILCMPIK	TQSILC(UniMod:4)MPIK	2	TQSILC(UniMod:4)MPIK2	730160	731352	789485
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	TQSILFNR	TQSILFNR	2	TQSILFNR2	32650.5	32554.5	33098.3
Q02769	Q02769	FDFT_RAT	Fdft1	Squalene synthase	1	TQSLPNCQLISR	TQSLPNC(UniMod:4)QLISR	2	TQSLPNC(UniMod:4)QLISR2	19762.5	20056.9	15830.1
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	TQSNTLDIVFQTDLTGQNK	TQSNTLDIVFQTDLTGQNK	3	TQSNTLDIVFQTDLTGQNK3	854056	861511	837650
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	TQSNTLDIVFQTDLTGQNKGWK	TQSNTLDIVFQTDLTGQNKGWK	3	TQSNTLDIVFQTDLTGQNKGWK3			11458.6
B0BNB9	B0BNB9	B0BNB9_RAT	Htra2	HtrA serine peptidase 2	1	TQSQLAVR	TQSQLAVR	2	TQSQLAVR2	69926.5	66766.5	83387.2
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	TQSQLLIIDR	TQSQLLIIDR	2	TQSQLLIIDR2	36364.2	48776.3	50601.9
Q5I6B8	Q5I6B8	PI51C_RAT	Pip5k1c	Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma	1	TQSSGQDGRPQEELHAEDLQK	TQSSGQDGRPQEELHAEDLQK	3	TQSSGQDGRPQEELHAEDLQK3	7442.09	3865.95	2771.3
Q5I6B8	Q5I6B8	PI51C_RAT	Pip5k1c	Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma	1	TQSSGQDGRPQEELHAEDLQK	TQSSGQDGRPQEELHAEDLQK	4	TQSSGQDGRPQEELHAEDLQK4	5039.6	3845.42	5933.61
Q6MGD0	Q6MGD0	CUTA_RAT	Cuta	Protein CutA	1	TQSSLVPALTEFVR	TQSSLVPALTEFVR	2	TQSSLVPALTEFVR2	12616.9	11910.9	15157.6
A0A8I6G4R8	A0A8I6G4R8	A0A8I6G4R8_RAT	Hdac5	Histone deacetylase	1	TQSSPAAPGSMK	TQSSPAAPGSMK	2	TQSSPAAPGSMK2	5887.36	9248.49	19387.9
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	TQSTNFLIHCLTALSQK	TQSTNFLIHC(UniMod:4)LTALSQK	3	TQSTNFLIHC(UniMod:4)LTALSQK3	17381.8	13365.6	16992.5
P20291	P20291	AL5AP_RAT	Alox5ap	Arachidonate 5-lipoxygenase-activating protein	1	TQSTPGYIFGK	TQSTPGYIFGK	2	TQSTPGYIFGK2	8765.31	6193.36	9542.87
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	TQSTWVDSFFR	TQSTWVDSFFR	2	TQSTWVDSFFR2	42253.8	55953.6	42078.6
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	TQSVACIK	TQSVAC(UniMod:4)IK	2	TQSVAC(UniMod:4)IK2	19981.8	26324.6	27584.8
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	TQTAATVEQCNVHLPVSR	TQTAATVEQC(UniMod:4)NVHLPVSR	3	TQTAATVEQC(UniMod:4)NVHLPVSR3	140306	153461	161512
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	TQTAIASEDMPNTLTEAEK	TQTAIASEDMPNTLTEAEK	3	TQTAIASEDMPNTLTEAEK3	80909.7	93545.1	89725.1
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	TQTAVSIVEEDLK	TQTAVSIVEEDLK	2	TQTAVSIVEEDLK2	4721.63	4977.02	16384.8
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	TQTAVVQR	TQTAVVQR	2	TQTAVVQR2		56648.4	
A0A0G2K4S7	A0A0G2K4S7	A0A0G2K4S7_RAT	Usp45	Ubiquitin carboxyl-terminal hydrolase	1	TQTDAFSR	TQTDAFSR	2	TQTDAFSR2	6576.61	10542.8	7394.26
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	TQTDFNDMEDDDPQISYMISAWAR	TQTDFNDMEDDDPQISYMISAWAR	3	TQTDFNDMEDDDPQISYMISAWAR3		3732.94	8071.87
P29534	P29534	VCAM1_RAT	Vcam1	Vascular cell adhesion protein 1	1	TQTDSPLNGEVR	TQTDSPLNGEVR	2	TQTDSPLNGEVR2	96258.3	79870.9	85573.3
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	TQTDYENSLTMK	TQTDYENSLTMK	2	TQTDYENSLTMK2	54045.9	58834.7	54288.9
D3ZG57	D3ZG57	D3ZG57_RAT	Tor4a	Torsin family 4, member A	1	TQTEESPALEELQTSLR	TQTEESPALEELQTSLR	2	TQTEESPALEELQTSLR2	4015.7	10305.3	11658.8
D3ZG57	D3ZG57	D3ZG57_RAT	Tor4a	Torsin family 4, member A	1	TQTEESPALEELQTSLR	TQTEESPALEELQTSLR	3	TQTEESPALEELQTSLR3	11289.2	12845.5	9369.44
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	TQTGDSSSVSSFSYR	TQTGDSSSVSSFSYR	2	TQTGDSSSVSSFSYR2	11845.4	11337.3	14332
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	TQTGHVLGNPQSSGTAEASDR	TQTGHVLGNPQSSGTAEASDR	3	TQTGHVLGNPQSSGTAEASDR3	3994.75	5560.59	2043.17
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	TQTHPCSHGIVIFSR	TQTHPC(UniMod:4)SHGIVIFSR	3	TQTHPC(UniMod:4)SHGIVIFSR3	27063.5	26242.6	28483.9
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	TQTHPCSHGIVIFSR	TQTHPC(UniMod:4)SHGIVIFSR	4	TQTHPC(UniMod:4)SHGIVIFSR4	83604.6	110598	101719
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	TQTISNSGSANGIHQPDK	TQTISNSGSANGIHQPDK	2	TQTISNSGSANGIHQPDK2	1536.19		2798.31
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	TQTISNSGSANGIHQPDK	TQTISNSGSANGIHQPDK	3	TQTISNSGSANGIHQPDK3	21696.6	19434.4	22188
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	TQTLVIHVK	TQTLVIHVK	2	TQTLVIHVK2	52912	96480.5	47646.7
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	TQTPPLGQTPQLGLK	TQTPPLGQTPQLGLK	2	TQTPPLGQTPQLGLK2	151703	186987	194153
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	TQTPPLGQTPQLGLK	TQTPPLGQTPQLGLK	3	TQTPPLGQTPQLGLK3	22486.3	20270.6	21011.6
Q6Q3E8	Q6Q3E8	Q6Q3E8_RAT	Eng	Endoglin	1	TQTPVQGCHLEGVTGHK	TQTPVQGC(UniMod:4)HLEGVTGHK	4	TQTPVQGC(UniMod:4)HLEGVTGHK4	6670.69	2541.5	4768.77
Q5PQT0	Q5PQT0	Q5PQT0_RAT	Pask	PAS domain containing serine/threonine kinase	1	TQTQLETGR	TQTQLETGR	2	TQTQLETGR2		3401.28	7122.11
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	TQTQMDLEQR	TQTQMDLEQR	2	TQTQMDLEQR2	29904.2	38906.7	37757.2
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	TQTSHMQGLGSLEEALEALDPPGDK	TQTSHMQGLGSLEEALEALDPPGDK	3	TQTSHMQGLGSLEEALEALDPPGDK3	47912.1	50529	46154.5
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	TQTVHSTYSHQQVIPHVYPVAAK	TQTVHSTYSHQQVIPHVYPVAAK	4	TQTVHSTYSHQQVIPHVYPVAAK4	84040.4	79348.2	85478.9
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	TQTVLSELK	TQTVLSELK	2	TQTVLSELK2	227803	196878	203754
G3V8Y8	G3V8Y8	G3V8Y8_RAT	Hip1	Huntingtin interacting protein 1	1	TQTVSVNK	TQTVSVNK	2	TQTVSVNK2	13716	15720.2	
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	TQTVTISDTANAVK	TQTVTISDTANAVK	2	TQTVTISDTANAVK2	103011	129180	106312
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	TQVAEYK	TQVAEYK	2	TQVAEYK2	61874.6	54503.4	58200.4
A0A8I6AMS6	A0A8I6AMS6	A0A8I6AMS6_RAT	Rangap1	RAN GTPase activating protein 1	1	TQVAGGQLSFK	TQVAGGQLSFK	2	TQVAGGQLSFK2	9368.2	19533.6	16667.4
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	TQVALIQYANDPR	TQVALIQYANDPR	2	TQVALIQYANDPR2	145569	136024	147710
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	TQVALIQYANDPR	TQVALIQYANDPR	3	TQVALIQYANDPR3	62341.6	70626.7	56988.4
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	TQVCGILR	TQVC(UniMod:4)GILR	2	TQVC(UniMod:4)GILR2	144267	113888	121017
F1M3G7	F1M3G7	AKP13_RAT	Akap13	A-kinase anchor protein 13	1	TQVEIQNPPLSSSEIK	TQVEIQNPPLSSSEIK	2	TQVEIQNPPLSSSEIK2	1675.84		4309.37
A2RRU1	A2RRU1	GYS1_RAT	Gys1	Glycogen [starch] synthase, muscle	1	TQVELLEPPTPELK	TQVELLEPPTPELK	2	TQVELLEPPTPELK2	30493.5	47431.3	51360.4
A2RRU1	A2RRU1	GYS1_RAT	Gys1	Glycogen [starch] synthase, muscle	1	TQVELLEPPTPELK	TQVELLEPPTPELK	3	TQVELLEPPTPELK3	8220	4109.97	9818.28
A2RRU1	A2RRU1	GYS1_RAT	Gys1	Glycogen [starch] synthase, muscle	1	TQVELLEPPTPELKR	TQVELLEPPTPELKR	3	TQVELLEPPTPELKR3	19323.5	35316.8	24139.2
B5DEP5	B5DEP5	B5DEP5_RAT	Trip4	Thyroid hormone receptor interactor 4	1	TQVIDDESDYFASDSNQWLSK	TQVIDDESDYFASDSNQWLSK	3	TQVIDDESDYFASDSNQWLSK3	5508.95		10577
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	TQVLELETSLHTAK	TQVLELETSLHTAK	3	TQVLELETSLHTAK3	7081.13	7407.33	8579.28
F1LN92	F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	1	TQVLQPEEK	TQVLQPEEK	2	TQVLQPEEK2	23326.7	20483.7	23072.3
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	TQVLSPDSLFTAK	TQVLSPDSLFTAK	2	TQVLSPDSLFTAK2	23418.7	30646.3	36210
Q99P74	Q99P74	RB27B_RAT	Rab27b	Ras-related protein Rab-27B	1	TQVPDTVNGVNSGK	TQVPDTVNGVNSGK	2	TQVPDTVNGVNSGK2	849249	801060	872178
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	TQVPEVFLSK	TQVPEVFLSK	2	TQVPEVFLSK2	1.49637e+06	1.04402e+06	1.17143e+06
P20759	P20759	IGHG1_RAT		Ig gamma-1 chain C region	1	TQVPHVYTMSPTK	TQVPHVYTMSPTK	2	TQVPHVYTMSPTK2	473148	332812	270454
P20759	P20759	IGHG1_RAT		Ig gamma-1 chain C region	1	TQVPHVYTMSPTK	TQVPHVYTMSPTK	3	TQVPHVYTMSPTK3	66389.1	67869	2.23326e+06
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	TQVPMVVMPHGGPHSSFVTAWMLFPAMLCK	TQVPMVVMPHGGPHSSFVTAWMLFPAMLC(UniMod:4)K	4	TQVPMVVMPHGGPHSSFVTAWMLFPAMLC(UniMod:4)K4	5475.37	9119.67	
Q5RJP5	Q5RJP5	Q5RJP5_RAT	Isg20	Interferon stimulated exonuclease 20	1	TQVSGITPQHMAR	TQVSGITPQHMAR	3	TQVSGITPQHMAR3	6576.94	11996	7173.98
D3ZU48	D3ZU48	D3ZU48_RAT	Klhdc4	Kelch domain containing 4	1	TQVTETPCPPPSPR	TQVTETPC(UniMod:4)PPPSPR	2	TQVTETPC(UniMod:4)PPPSPR2	15429.1	13953.1	19830.2
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	TQVTVLGVPDPPR	TQVTVLGVPDPPR	2	TQVTVLGVPDPPR2	43091.3	41676.8	41360
P18298	P18298;A0A8I6G8F2	METK2_RAT	Mat2a	S-adenosylmethionine synthase isoform type-2	0	TQVTVQYMQDR	TQVTVQYMQDR	2	TQVTVQYMQDR2	23772.3	16865.9	14501.3
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	TQVTYECEEGYR	TQVTYEC(UniMod:4)EEGYR	2	TQVTYEC(UniMod:4)EEGYR2	736083	942073	1.02675e+06
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	TQVTYECEEGYR	TQVTYEC(UniMod:4)EEGYR	3	TQVTYEC(UniMod:4)EEGYR3	98245.4	112667	114818
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	TQWEDPR	TQWEDPR	2	TQWEDPR2	145856	189015	160433
A0A8I6AEI3	A0A8I6AEI3	A0A8I6AEI3_RAT	Wwox	WW domain-containing oxidoreductase	1	TQWEHPK	TQWEHPK	2	TQWEHPK2		7433.27	
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	TQWESTQHGVELR	TQWESTQHGVELR	2	TQWESTQHGVELR2	11921.9	13407.8	14273.5
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	TQWESTQHGVELR	TQWESTQHGVELR	3	TQWESTQHGVELR3	130523	135205	321279
Q5PQL3	Q5PQL3	SPP2B_RAT	Sppl2b	Signal peptide peptidase-like 2B	1	TQYEEISIPVALLSHR	TQYEEISIPVALLSHR	3	TQYEEISIPVALLSHR3	8218.42	16941.1	11673.7
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	TQYIFNNMVLK	TQYIFNNMVLK	2	TQYIFNNMVLK2	34079.7	49515.5	33001.7
Q63616	Q63616	VP33B_RAT	Vps33b	Vacuolar protein sorting-associated protein 33B	1	TQYLQSYGPEHLLTFSNLR	TQYLQSYGPEHLLTFSNLR	3	TQYLQSYGPEHLLTFSNLR3	10125.5	7528.09	9066.64
Q2LAP6	B0BMX0;Q2LAP6	TES_RAT	Tes	Testin	0	TQYSCYCCK	TQYSC(UniMod:4)YC(UniMod:4)C(UniMod:4)K	2	TQYSC(UniMod:4)YC(UniMod:4)C(UniMod:4)K2	59331.6	50185.5	68045.1
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	TQYSSAMLESLLPGIR	TQYSSAMLESLLPGIR	2	TQYSSAMLESLLPGIR2	7909.64	2440.05	6335.06
D3ZT94	D3ZT94	D3ZT94_RAT	Ptx3	Pentraxin 3	1	TRADLSAMQSWVAR	TRADLSAMQSWVAR	3	TRADLSAMQSWVAR3	44797.9	66619.6	89893.4
M0RB87	M0RB87	M0RB87_RAT	Gdf2	Growth differentiation factor 2	1	TRAEPPQYMIDLYNR	TRAEPPQYMIDLYNR	3	TRAEPPQYMIDLYNR3	1928.35	3927.48	
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	TRCPWQDEAFIR	TRC(UniMod:4)PWQDEAFIR	3	TRC(UniMod:4)PWQDEAFIR3	3585.7	7947.97	7695.18
Q7TP48	Q7TP48	APMAP_RAT	Apmap	Adipocyte plasma membrane-associated protein	1	TRDDEPTCGRPLGIR	TRDDEPTC(UniMod:4)GRPLGIR	3	TRDDEPTC(UniMod:4)GRPLGIR3	7560.62	5118.72	5169.85
Q7TP48	Q7TP48	APMAP_RAT	Apmap	Adipocyte plasma membrane-associated protein	1	TRDDEPTCGRPLGIR	TRDDEPTC(UniMod:4)GRPLGIR	4	TRDDEPTC(UniMod:4)GRPLGIR4	29384	42000.2	56537.8
Q6AY97	Q6AY97	CCD91_RAT	Ccdc91	Coiled-coil domain-containing protein 91	1	TRDELVEYVR	TRDELVEYVR	3	TRDELVEYVR3	9105.78	13638.7	12872.5
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	TRDGSDYEGWCWPGSASYPDFTNPQMR	TRDGSDYEGWC(UniMod:4)WPGSASYPDFTNPQMR	4	TRDGSDYEGWC(UniMod:4)WPGSASYPDFTNPQMR4	7065.93	8366.01	6771.48
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	TRDNTEQPVAPAAFQQALPAAVAQAGGPR	TRDNTEQPVAPAAFQQALPAAVAQAGGPR	3	TRDNTEQPVAPAAFQQALPAAVAQAGGPR3	57218.4	65870.1	58082
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	TRDNTEQPVAPAAFQQALPAAVAQAGGPR	TRDNTEQPVAPAAFQQALPAAVAQAGGPR	4	TRDNTEQPVAPAAFQQALPAAVAQAGGPR4	9612.26	17196.4	20333.5
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	TREDGPWIPYQYYSGSCENTYSK	TREDGPWIPYQYYSGSC(UniMod:4)ENTYSK	3	TREDGPWIPYQYYSGSC(UniMod:4)ENTYSK3	43565.8	46264.2	38261.6
Q920P0	Q920P0	DCXR_RAT	Dcxr	L-xylulose reductase	1	TREDLDSLVR	TREDLDSLVR	3	TREDLDSLVR3	4099.12	2258.66	5794.73
D4A5G8	D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	TREEIQEVR	TREEIQEVR	2	TREEIQEVR2	3946.26		
D4A5G8	D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	TREEIQEVR	TREEIQEVR	3	TREEIQEVR3	162763	183776	166600
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	TREGNDLYHEMIESGVINLK	TREGNDLYHEMIESGVINLK	3	TREGNDLYHEMIESGVINLK3	139726	149158	171830
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	TREGNDLYHEMIESGVINLK	TREGNDLYHEMIESGVINLK	4	TREGNDLYHEMIESGVINLK4	376127	378335	392213
Q6AY23	Q6AY23	P5CR2_RAT	Pycr2	Pyrroline-5-carboxylate reductase 2	1	TRELQSMADQEK	TRELQSMADQEK	3	TRELQSMADQEK3	2479.65	3294.94	5651.73
Q9Z0V5	Q9Z0V5	PRDX4_RAT	Prdx4	Peroxiredoxin-4	1	TRENECHFYAGGQVYPGEVSR	TRENEC(UniMod:4)HFYAGGQVYPGEVSR	3	TRENEC(UniMod:4)HFYAGGQVYPGEVSR3	12531.3	8824.77	10316.5
Q9Z0V5	Q9Z0V5	PRDX4_RAT	Prdx4	Peroxiredoxin-4	1	TRENECHFYAGGQVYPGEVSR	TRENEC(UniMod:4)HFYAGGQVYPGEVSR	4	TRENEC(UniMod:4)HFYAGGQVYPGEVSR4	71965.9	105235	87711.5
P50411	P50411	IPP2_RAT	Ppp1r2	Protein phosphatase inhibitor 2	1	TREQESSGEEDNDLSPEER	TREQESSGEEDNDLSPEER	3	TREQESSGEEDNDLSPEER3		1701.81	
Q03344	Q03344	ATIF1_RAT	Atp5if1	ATPase inhibitor, mitochondrial	1	TREQLAALK	TREQLAALK	2	TREQLAALK2	78163.6	59952.9	69157.2
Q03344	Q03344	ATIF1_RAT	Atp5if1	ATPase inhibitor, mitochondrial	1	TREQLAALKK	TREQLAALKK	2	TREQLAALKK2	5991.65	9120.92	13891.9
Q03344	Q03344	ATIF1_RAT	Atp5if1	ATPase inhibitor, mitochondrial	1	TREQLAALKK	TREQLAALKK	3	TREQLAALKK3	513424	487724	632704
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	TREQVTEAFR	TREQVTEAFR	3	TREQVTEAFR3	22534.7	27351.8	38808.6
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	TREVLLPK	TREVLLPK	2	TREVLLPK2	658355	608496	613090
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	TRFPPEPNGILHIGHAK	TRFPPEPNGILHIGHAK	4	TRFPPEPNGILHIGHAK4	2595.47		
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	TRFQESEERPK	TRFQESEERPK	3	TRFQESEERPK3	15572.7		20427.7
D4A1B2	D4A1B2	D4A1B2_RAT	Arpin	Arpin	1	TRGDGPFIDSLAK	TRGDGPFIDSLAK	3	TRGDGPFIDSLAK3	63475.7	59051.7	44544.3
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	TRGNDASLPSFR	TRGNDASLPSFR	3	TRGNDASLPSFR3	16511.3	29184.5	17649.1
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	TRGTLLAVER	TRGTLLAVER	2	TRGTLLAVER2		5014.41	5670.59
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	TRGTLLAVERK	TRGTLLAVERK	3	TRGTLLAVERK3	6712.84	15483.6	17126.7
Q68FX0	Q68FX0	IDH3B_RAT	Idh3B	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	TRHNNLDLVIIR	TRHNNLDLVIIR	3	TRHNNLDLVIIR3	2833.95		6205.06
G3V619	G3V619	G3V619_RAT	Ascc1	Activating signal cointegrator 1 complex subunit 1	1	TRIDVLLDTFR	TRIDVLLDTFR	3	TRIDVLLDTFR3	5199.25	5197.5	3640.2
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	TRIEGLLAAFPK	TRIEGLLAAFPK	2	TRIEGLLAAFPK2	28752.4	25848.6	17470.6
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	TRIEGLLAAFPK	TRIEGLLAAFPK	3	TRIEGLLAAFPK3	182597	175791	202501
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	TRIPYKPNYSLNLWSIMK	TRIPYKPNYSLNLWSIMK	4	TRIPYKPNYSLNLWSIMK4	8406.93	4406.56	8148.64
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	TRLDELK	TRLDELK	2	TRLDELK2	41986.6	39804.5	46143.2
P29410	P29410	KAD2_RAT	Ak2	Adenylate kinase 2, mitochondrial	1	TRLEAYHTQTTPLVEYYR	TRLEAYHTQTTPLVEYYR	3	TRLEAYHTQTTPLVEYYR3	33110.8	24346.1	19228.2
P29410	P29410	KAD2_RAT	Ak2	Adenylate kinase 2, mitochondrial	1	TRLEAYHTQTTPLVEYYR	TRLEAYHTQTTPLVEYYR	4	TRLEAYHTQTTPLVEYYR4	83587.3	106457	120688
P07808	P07808	NPY_RAT	Npy	Pro-neuropeptide Y	1	TRLEDPSMW	TRLEDPSMW	2	TRLEDPSMW2	203127	194855	249021
Q5XI83	Q5XI83	VP35L_RAT	Vps35l	VPS35 endosomal protein-sorting factor-like	1	TRLEELDDFEEGSQK	TRLEELDDFEEGSQK	3	TRLEELDDFEEGSQK3	6544.38	21363.9	9846.49
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	TRLEISNPIPIK	TRLEISNPIPIK	3	TRLEISNPIPIK3	11503.3		16097.2
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	TRLEPGQPQLSPGVSTIHLHPQFPVVVEK	TRLEPGQPQLSPGVSTIHLHPQFPVVVEK	4	TRLEPGQPQLSPGVSTIHLHPQFPVVVEK4	27204.4	25566.5	17671
Q6IFU8	Q6IFV1;P25030;Q6IFV4;Q6IFU7;Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	0	TRLEQEIATYR	TRLEQEIATYR	2	TRLEQEIATYR2	3679.54		
Q6IFU8	Q6IFV1;P25030;Q6IFV4;Q6IFU7;Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	0	TRLEQEIATYR	TRLEQEIATYR	3	TRLEQEIATYR3	137693	111022	106241
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	TRLQQELDDLLVDLDHQR	TRLQQELDDLLVDLDHQR	3	TRLQQELDDLLVDLDHQR3	291126	151665	133671
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	TRLQQELDDLLVDLDHQR	TRLQQELDDLLVDLDHQR	4	TRLQQELDDLLVDLDHQR4	1.92881e+06	1.02205e+06	1.04089e+06
Q9ES54	Q9ES54	NPL4_RAT	Nploc4	Nuclear protein localization protein 4 homolog	1	TRNEELAQTWK	TRNEELAQTWK	3	TRNEELAQTWK3	19862.6	13622.5	14750.3
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	TRNKFLFLK	TRNKFLFLK	3	TRNKFLFLK3	12827.1	8100.54	6607.12
P19939	P19939	APOC1_RAT	Apoc1	Apolipoprotein C-I	1	TRNWFSETLNK	TRNWFSETLNK	2	TRNWFSETLNK2	19429.5	35121.6	36169.7
P19939	P19939	APOC1_RAT	Apoc1	Apolipoprotein C-I	1	TRNWFSETLNK	TRNWFSETLNK	3	TRNWFSETLNK3	533556	932742	1.1031e+06
P37136	P37136	ACES_RAT	Ache	Acetylcholinesterase	1	TRPAQDLVDHEWHVLPQESIFR	TRPAQDLVDHEWHVLPQESIFR	3	TRPAQDLVDHEWHVLPQESIFR3	2708.33	3927.04	4127.46
P37136	P37136	ACES_RAT	Ache	Acetylcholinesterase	1	TRPAQDLVDHEWHVLPQESIFR	TRPAQDLVDHEWHVLPQESIFR	4	TRPAQDLVDHEWHVLPQESIFR4	144342	89706.3	113557
B2RYG6	B2RYG6	OTUB1_RAT	Otub1	Ubiquitin thioesterase OTUB1	1	TRPDGNCFYR	TRPDGNC(UniMod:4)FYR	2	TRPDGNC(UniMod:4)FYR2	5025.04	5009.3	2087.44
B2RYG6	B2RYG6	OTUB1_RAT	Otub1	Ubiquitin thioesterase OTUB1	1	TRPDGNCFYR	TRPDGNC(UniMod:4)FYR	3	TRPDGNC(UniMod:4)FYR3	37760.9	58425.1	44698.7
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	TRPDLISEDVQR	TRPDLISEDVQR	3	TRPDLISEDVQR3	48859.9	56137.2	55314.4
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	TRPEFYLNSHMDQQGVISAIR	TRPEFYLNSHMDQQGVISAIR	4	TRPEFYLNSHMDQQGVISAIR4	7518.86	7217.17	10253.1
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	TRPEVGDLLR	TRPEVGDLLR	3	TRPEVGDLLR3	48071	50182.1	37683.6
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	TRPHLCCK	TRPHLC(UniMod:4)C(UniMod:4)K	2	TRPHLC(UniMod:4)C(UniMod:4)K2			45856.5
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	TRPLPGTPSGMK	TRPLPGTPSGMK	2	TRPLPGTPSGMK2	5004.77	3570.48	3161.46
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	TRPLPGTPSGMK	TRPLPGTPSGMK	3	TRPLPGTPSGMK3	112778	84382.6	102465
P08503	P08503	ACADM_RAT	Acadm	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1	TRPTVAAGAVGLAQR	TRPTVAAGAVGLAQR	3	TRPTVAAGAVGLAQR3	148434	151965	149080
G3V8G1	G3V8G1	G3V8G1_RAT	Agtpbp1	tubulin-glutamate carboxypeptidase	1	TRPYIFLSAR	TRPYIFLSAR	3	TRPYIFLSAR3		5381.31	6229.92
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	TRQEGTVHTQVAGTWVSSR	TRQEGTVHTQVAGTWVSSR	4	TRQEGTVHTQVAGTWVSSR4	4878.94	6979.13	8959.31
Q6AY41	Q6AY41	CC50A_RAT	Tmem30a	Cell cycle control protein 50A	1	TRRPDNTAFK	TRRPDNTAFK	2	TRRPDNTAFK2			4200.08
Q6AY41	Q6AY41	CC50A_RAT	Tmem30a	Cell cycle control protein 50A	1	TRRPDNTAFK	TRRPDNTAFK	3	TRRPDNTAFK3	8449.83		17082.3
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	TRRVDSVNPPYPR	TRRVDSVNPPYPR	3	TRRVDSVNPPYPR3	67316.9	29169.6	23438.3
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	TRRVDSVNPPYPR	TRRVDSVNPPYPR	4	TRRVDSVNPPYPR4	389543	440554	544932
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	TRSDIVSR	TRSDIVSR	2	TRSDIVSR2	23717.9		45368.4
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	TRTEDIEQDGELEGPVIDESVLSTK	TRTEDIEQDGELEGPVIDESVLSTK	3	TRTEDIEQDGELEGPVIDESVLSTK3	9251.53	7746.42	2874.04
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	TRTEQLIAQTK	TRTEQLIAQTK	2	TRTEQLIAQTK2	1074.16		1545.67
Q05028	Q05028	PDGFB_RAT	Pdgfb	Platelet-derived growth factor subunit B (Fragment)	1	TRTEVFQISR	TRTEVFQISR	3	TRTEVFQISR3	24434.1	19528.2	22209.1
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	TRTPDEVLEAEAEPK	TRTPDEVLEAEAEPK	3	TRTPDEVLEAEAEPK3	19125	10656.6	13028.6
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	TRWYSMK	TRWYSMK	2	TRWYSMK2	3263.72	2210.66	
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	TRWYSMKETTMK	TRWYSMKETTMK	3	TRWYSMKETTMK3	1485.29	5887.01	2347.77
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	TRWYSMKETTMK	TRWYSMKETTMK	4	TRWYSMKETTMK4	5109.92	3429.78	8341.83
O35217	O35217	MINP1_RAT	Minpp1	Multiple inositol polyphosphate phosphatase 1	1	TRYEDVNPWLLGDPVAPR	TRYEDVNPWLLGDPVAPR	3	TRYEDVNPWLLGDPVAPR3	51080.2	66669.5	63434.8
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	TSAAAVSSK	TSAAAVSSK	1	TSAAAVSSK1			4998.24
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	TSAAAVSSK	TSAAAVSSK	2	TSAAAVSSK2			42579.3
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	TSAALHPEQK	TSAALHPEQK	2	TSAALHPEQK2	6481.47		9477.02
Q6PCT3	Q6PCT3	TPD54_RAT	Tpd52l2	Tumor protein D54	1	TSAALSTMGSAISR	TSAALSTMGSAISR	2	TSAALSTMGSAISR2	14965.2	13534.7	9107.09
Q5XIJ5	Q5XIJ5	AB17A_RAT	Abhd17a	Alpha/beta hydrolase domain-containing protein 17A	1	TSAATPGR	TSAATPGR	2	TSAATPGR2			17819.1
D4A9P0	D4A9P0	D4A9P0_RAT	Kif7	Kinesin family member 7	1	TSAAYSLLR	TSAAYSLLR	2	TSAAYSLLR2	2811.03	3545.89	
Q4QQT4	Q4QQT4;Q5XI34	2AAB_RAT	Ppp2r1b	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	0	TSACGLFSVCYPR	TSAC(UniMod:4)GLFSVC(UniMod:4)YPR	2	TSAC(UniMod:4)GLFSVC(UniMod:4)YPR2	291144	244270	255187
P19999	P19999	MBL1_RAT	Mbl1	Mannose-binding protein A	1	TSAFLGITDEVTEGQFMYVTGGR	TSAFLGITDEVTEGQFMYVTGGR	3	TSAFLGITDEVTEGQFMYVTGGR3	53725.6	34276	50623.1
A0A0G2JV05	A0A0G2JV05	A0A0G2JV05_RAT	Mroh1	Maestro heat-like repeat family member 1	1	TSAGHEDGVAQLASSMAK	TSAGHEDGVAQLASSMAK	3	TSAGHEDGVAQLASSMAK3	3950.96		3710.91
A0A8I6GKH8	A0A8I6GKH8	A0A8I6GKH8_RAT	Map7	Microtubule-associated protein 7	1	TSAGTTDPEEATR	TSAGTTDPEEATR	2	TSAGTTDPEEATR2	4387.61	2712.07	4685.5
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	TSAHFAR	TSAHFAR	2	TSAHFAR2			8219.63
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	TSAPGGVPLQPQELEFTK	TSAPGGVPLQPQELEFTK	2	TSAPGGVPLQPQELEFTK2	272448	241748	286434
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	TSAPGGVPLQPQELEFTK	TSAPGGVPLQPQELEFTK	3	TSAPGGVPLQPQELEFTK3	85087.4	72331.8	72485.8
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TSAPITCELLNK	TSAPITC(UniMod:4)ELLNK	2	TSAPITC(UniMod:4)ELLNK2	377386	374176	411021
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	TSAPPSRPPPPK	TSAPPSRPPPPK	2	TSAPPSRPPPPK2	189801		233334
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	TSAPPSRPPPPK	TSAPPSRPPPPK	3	TSAPPSRPPPPK3	1.24116e+07		1.03715e+07
D3ZCJ3	D3ZCJ3	D3ZCJ3_RAT	Mfsd6	Major facilitator superfamily domain containing 6	1	TSAQGILQGLHLGLGR	TSAQGILQGLHLGLGR	2	TSAQGILQGLHLGLGR2	2362.64	4743.42	2248.37
D3ZCJ3	D3ZCJ3	D3ZCJ3_RAT	Mfsd6	Major facilitator superfamily domain containing 6	1	TSAQGILQGLHLGLGR	TSAQGILQGLHLGLGR	3	TSAQGILQGLHLGLGR3	60591	58975.3	58621.4
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	TSAQIVLDGLVDK	TSAQIVLDGLVDK	2	TSAQIVLDGLVDK2	103455	82739.1	69408.8
M0R4M1	M0R4M1	M0R4M1_RAT	Nlrc5	NLR family, CARD domain containing 5	1	TSAQQCHGGQCPGAWNAR	TSAQQC(UniMod:4)HGGQC(UniMod:4)PGAWNAR	3	TSAQQC(UniMod:4)HGGQC(UniMod:4)PGAWNAR3	1631.89		
Q75WE7	Q75WE7	VWA5A_RAT	Vwa5a	von Willebrand factor A domain-containing protein 5A	1	TSAQVSLTEGHK	TSAQVSLTEGHK	2	TSAQVSLTEGHK2	1377.67	3032.81	
Q75WE7	Q75WE7	VWA5A_RAT	Vwa5a	von Willebrand factor A domain-containing protein 5A	1	TSAQVSLTEGHK	TSAQVSLTEGHK	3	TSAQVSLTEGHK3	9530.89	2820.12	3675.87
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	TSASGEEANSRPSAQPHPSGGLIIDK	TSASGEEANSRPSAQPHPSGGLIIDK	3	TSASGEEANSRPSAQPHPSGGLIIDK3	22738.6	18188.1	24708.6
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	TSASGEEANSRPSAQPHPSGGLIIDK	TSASGEEANSRPSAQPHPSGGLIIDK	4	TSASGEEANSRPSAQPHPSGGLIIDK4	17598.4	19060.5	17875.1
P60203	P60203	MYPR_RAT	Plp1	Myelin proteolipid protein	1	TSASIGSLCADAR	TSASIGSLC(UniMod:4)ADAR	2	TSASIGSLC(UniMod:4)ADAR2	156290	177496	172204
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	TSASIILR	TSASIILR	2	TSASIILR2	196027	223264	224159
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	TSASTDIEK	TSASTDIEK	2	TSASTDIEK2	57070.2	45556.1	62176.7
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	TSATWFALSR	TSATWFALSR	2	TSATWFALSR2	79600.3	79672.6	87740.9
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	TSAVSRPQAEVK	TSAVSRPQAEVK	3	TSAVSRPQAEVK3	40392.9	24634.4	44819.9
P62815	P62815	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	1	TSCEFTGDILR	TSC(UniMod:4)EFTGDILR	2	TSC(UniMod:4)EFTGDILR2	52665.6	40989.9	38199.4
P54645	Q09137;P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	0	TSCGSPNYAAPEVISGR	TSC(UniMod:4)GSPNYAAPEVISGR	2	TSC(UniMod:4)GSPNYAAPEVISGR2	38944.3	36352.7	32721.1
P54645	Q09137;P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	0	TSCGSPNYAAPEVISGR	TSC(UniMod:4)GSPNYAAPEVISGR	3	TSC(UniMod:4)GSPNYAAPEVISGR3	8298.58	22673	14936
O08774	O08774	RGS12_RAT	Rgs12	Regulator of G-protein signaling 12	1	TSCHVFMVDPDLFHHK	TSC(UniMod:4)HVFMVDPDLFHHK	3	TSC(UniMod:4)HVFMVDPDLFHHK3		2300.69	4541.19
O08774	O08774	RGS12_RAT	Rgs12	Regulator of G-protein signaling 12	1	TSCHVFMVDPDLFHHK	TSC(UniMod:4)HVFMVDPDLFHHK	4	TSC(UniMod:4)HVFMVDPDLFHHK4	8484.74	5900.25	1746.01
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	TSCIEAVSQNK	TSC(UniMod:4)IEAVSQNK	2	TSC(UniMod:4)IEAVSQNK2	83928.5	101133	85911
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	TSCLLFMGR	TSC(UniMod:4)LLFMGR	2	TSC(UniMod:4)LLFMGR2	8.78376e+06	8.47734e+06	7.99769e+06
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	TSDDIESGFQALAEGK	TSDDIESGFQALAEGK	2	TSDDIESGFQALAEGK2	4067.93	5610.4	5275.25
D4A4T9	D4A4T9	CHRD1_RAT	Chordc1	Cysteine and histidine-rich domain-containing protein 1	1	TSDFNTFLAQEGCTR	TSDFNTFLAQEGC(UniMod:4)TR	2	TSDFNTFLAQEGC(UniMod:4)TR2	10585.2	9110.68	4467.82
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	TSDFWDSLEK	TSDFWDSLEK	2	TSDFWDSLEK2	28524.9	25015.7	21997.7
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	TSDHEVVPTGK	TSDHEVVPTGK	3	TSDHEVVPTGK3	25494.7	29565.4	28464.6
D4A2N2	D4A2N2	D4A2N2_RAT	Inpp5b	phosphoinositide 5-phosphatase	1	TSDHKPVSSVFEIGVR	TSDHKPVSSVFEIGVR	3	TSDHKPVSSVFEIGVR3	7549.41	12978.7	4187.4
A0A8I6GLU8	A0A8I6GLU8	A0A8I6GLU8_RAT	Tardbp	TAR DNA-binding protein 43	1	TSDLIVLGLPWK	TSDLIVLGLPWK	2	TSDLIVLGLPWK2	16808.6	14418.7	17556.7
D3ZK09	D3ZK09	D3ZK09_RAT	Scyl3	SCY1 like pseudokinase 3	1	TSDLSPEGSPMHVVCSQQSR	TSDLSPEGSPMHVVC(UniMod:4)SQQSR	3	TSDLSPEGSPMHVVC(UniMod:4)SQQSR3	58160.3	42221.2	37029.9
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	TSDQAYIEFESIEAIVK	TSDQAYIEFESIEAIVK	2	TSDQAYIEFESIEAIVK2	2907.5		
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	TSDQIHFFFAK	TSDQIHFFFAK	2	TSDQIHFFFAK2	118291	84564.9	74298.9
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	TSDQIHFFFAK	TSDQIHFFFAK	3	TSDQIHFFFAK3	617169	661925	635600
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TSDQTWVK	TSDQTWVK	2	TSDQTWVK2	199783	234166	223713
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	TSDSDIFTDIENPSSHVPEFSSSSK	TSDSDIFTDIENPSSHVPEFSSSSK	3	TSDSDIFTDIENPSSHVPEFSSSSK3	137974	117016	118538
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	TSDSDIFTDIENPSSHVPEFSSSSK	TSDSDIFTDIENPSSHVPEFSSSSK	4	TSDSDIFTDIENPSSHVPEFSSSSK4	119215	111804	125007
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	TSDSDIFTDIENPSSHVPEFSSSSKTSTVR	TSDSDIFTDIENPSSHVPEFSSSSKTSTVR	4	TSDSDIFTDIENPSSHVPEFSSSSKTSTVR4	5358.31	9678.22	5335.3
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	TSDTGLYHCEASSSSGTDTWK	TSDTGLYHC(UniMod:4)EASSSSGTDTWK	3	TSDTGLYHC(UniMod:4)EASSSSGTDTWK3	4057.55	6272.42	7962.25
D3ZQQ1	D3ZQQ1	D3ZQQ1_RAT	Aftph	Aftiphilin	1	TSDVNEIGSSK	TSDVNEIGSSK	2	TSDVNEIGSSK2	13038.8	19880.2	19458.3
D3ZD73	D3ZD73	D3ZD73_RAT	Ddx6	DEAD-box helicase 6	1	TSDVTSTK	TSDVTSTK	2	TSDVTSTK2			11675.3
M0R6Q0	M0R6Q0	M0R6Q0_RAT	Casd1	CAS1 domain containing 1	1	TSDVYWVLQDPVYEDLLSENRK	TSDVYWVLQDPVYEDLLSENRK	3	TSDVYWVLQDPVYEDLLSENRK3	5256.96	8973.99	
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	TSEAAEDSFR	TSEAAEDSFR	2	TSEAAEDSFR2	89723.4	122089	116992
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	TSEAEDIFIPVLNIK	TSEAEDIFIPVLNIK	2	TSEAEDIFIPVLNIK2	134259	147913	165215
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	TSEAEDIFIPVLNIK	TSEAEDIFIPVLNIK	3	TSEAEDIFIPVLNIK3	14431.1	10537.3	19219.2
Q63707	Q63707	PYRD_RAT	Dhodh	Dihydroorotate dehydrogenase (quinone), mitochondrial	1	TSEDAAADYAEGVR	TSEDAAADYAEGVR	2	TSEDAAADYAEGVR2	5881.37	7025.05	6077.01
A0A0G2K8D1	A0A0G2K8D1	A0A0G2K8D1_RAT	Mospd2	Motile sperm domain containing 2	1	TSEDLYLQLNR	TSEDLYLQLNR	2	TSEDLYLQLNR2	7355.07	13790.9	3294.8
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	TSEEATVAAAICCR	TSEEATVAAAIC(UniMod:4)C(UniMod:4)R	2	TSEEATVAAAIC(UniMod:4)C(UniMod:4)R2	83972.3	81625.7	73550.8
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	TSEEATVAAAICCR	TSEEATVAAAIC(UniMod:4)C(UniMod:4)R	3	TSEEATVAAAIC(UniMod:4)C(UniMod:4)R3	53865.3	51135.6	49062.8
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	TSEEECVALGSFFFWK	TSEEEC(UniMod:4)VALGSFFFWK	2	TSEEEC(UniMod:4)VALGSFFFWK2	5221.63	4066.06	6187.62
Q5XXR3	Q5XXR3	ARHG6_RAT	Arhgef6	Rho guanine nucleotide exchange factor 6	1	TSEEEYVIR	TSEEEYVIR	2	TSEEEYVIR2	3703.91	5728.16	6127.96
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	TSEEFVR	TSEEFVR	2	TSEEFVR2	38975.7	51940.8	20624.9
P20786	P20786	PGFRA_RAT	Pdgfra	Platelet-derived growth factor receptor alpha	1	TSEFNVYALK	TSEFNVYALK	2	TSEFNVYALK2	30302.6	18708.3	27287.8
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	TSEFTAAFVGR	TSEFTAAFVGR	2	TSEFTAAFVGR2	13754.5	18896.4	14229.9
A0A8I6A5W7	A0A8I6A5W7	A0A8I6A5W7_RAT	Ccdc88a	Coiled coil domain containing 88A	1	TSELAEAPQK	TSELAEAPQK	2	TSELAEAPQK2	7782.92	3026.45	4869.92
P35565	P35565	CALX_RAT	Canx	Calnexin	1	TSELNLDQFHDK	TSELNLDQFHDK	2	TSELNLDQFHDK2	53229	81585.7	74813.5
P35565	P35565	CALX_RAT	Canx	Calnexin	1	TSELNLDQFHDK	TSELNLDQFHDK	3	TSELNLDQFHDK3	408240	337121	392230
P35565	P35565	CALX_RAT	Canx	Calnexin	1	TSELNLDQFHDKTPYTIMFGPDK	TSELNLDQFHDKTPYTIMFGPDK	3	TSELNLDQFHDKTPYTIMFGPDK3	7500.93	23721.4	13969.3
P35565	P35565	CALX_RAT	Canx	Calnexin	1	TSELNLDQFHDKTPYTIMFGPDK	TSELNLDQFHDKTPYTIMFGPDK	4	TSELNLDQFHDKTPYTIMFGPDK4	24487	45552	41180.6
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	TSELSIK	TSELSIK	1	TSELSIK1	33971.8	37145	28698
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	TSELSIK	TSELSIK	2	TSELSIK2	3.54174e+06	3.07613e+06	2.94467e+06
A0A8I6GK59	A0A8I6GK59	A0A8I6GK59_RAT	Bmp2k	BMP-2 inducible kinase	1	TSENPVVR	TSENPVVR	2	TSENPVVR2	18035.4	19998.5	26217.3
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	TSEPVWEENFTFFIHNPK	TSEPVWEENFTFFIHNPK	3	TSEPVWEENFTFFIHNPK3	21786.5	42034.4	34682.6
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	TSESGFPSTR	TSESGFPSTR	2	TSESGFPSTR2	28794.8	33169.4	17484.6
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	TSESLCQNNMVILK	TSESLC(UniMod:4)QNNMVILK	2	TSESLC(UniMod:4)QNNMVILK2	14234.3	10231.3	11753.7
A0A096MKD1	A0A096MKD1	A0A096MKD1_RAT	Eef1akmt1	EEF1A lysine methyltransferase 1	1	TSETIQFLTQGK	TSETIQFLTQGK	2	TSETIQFLTQGK2	4021.28	9226.2	5840.31
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	TSEVDLAKPLVK	TSEVDLAKPLVK	3	TSEVDLAKPLVK3	49935.7	33234.4	43768.9
P62634	P62634	CNBP_RAT	Cnbp	CCHC-type zinc finger nucleic acid binding protein	1	TSEVNCYR	TSEVNC(UniMod:4)YR	2	TSEVNC(UniMod:4)YR2	9673.27	6675.04	10718.6
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	TSEVPYAGINIGPVHK	TSEVPYAGINIGPVHK	2	TSEVPYAGINIGPVHK2	22404.7	20905.4	20488.8
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	TSEVPYAGINIGPVHK	TSEVPYAGINIGPVHK	3	TSEVPYAGINIGPVHK3	155230	195206	193654
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	TSEVVIGQCK	TSEVVIGQC(UniMod:4)K	2	TSEVVIGQC(UniMod:4)K2	1.24692e+06	1.2369e+06	1.15856e+06
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	TSEVYVWGGGK	TSEVYVWGGGK	2	TSEVYVWGGGK2	32533.8	39334.6	42416.7
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	TSFCLGLPLFLGR	TSFC(UniMod:4)LGLPLFLGR	2	TSFC(UniMod:4)LGLPLFLGR2	6817.34		5223.64
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	TSFDEMLPGTHFQR	TSFDEMLPGTHFQR	2	TSFDEMLPGTHFQR2	42930.7	49286	39062.8
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	TSFDEMLPGTHFQR	TSFDEMLPGTHFQR	3	TSFDEMLPGTHFQR3	255672	215620	251807
B2GUV7	B2GUV7	IF2P_RAT	Eif5b	Eukaryotic translation initiation factor 5B	1	TSFDENDSEELEDKDSK	TSFDENDSEELEDKDSK	3	TSFDENDSEELEDKDSK3	12030.8	7030.39	5684.11
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	TSFDKPDQMAALFK	TSFDKPDQMAALFK	2	TSFDKPDQMAALFK2	26171.2	21801.5	29375.8
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	TSFDKPDQMAALFK	TSFDKPDQMAALFK	3	TSFDKPDQMAALFK3	221201	201180	238811
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	TSFFHVK	TSFFHVK	2	TSFFHVK2	31075.7	20269	20456.7
P19945	P19945	RLA0_RAT	Rplp0	Large ribosomal subunit protein uL10	1	TSFFQALGITTK	TSFFQALGITTK	2	TSFFQALGITTK2	59492.8	78589.5	83791
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	TSFGSLKDEDR	TSFGSLKDEDR	2	TSFGSLKDEDR2	2865.78		2599.98
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	TSFGSLKDEDR	TSFGSLKDEDR	3	TSFGSLKDEDR3	137533	108560	126045
P97700	P97700	M2OM_RAT	Slc25a11	Mitochondrial 2-oxoglutarate/malate carrier protein	1	TSFHALTSILK	TSFHALTSILK	2	TSFHALTSILK2	13976.9	18311.1	16538.7
P97700	P97700	M2OM_RAT	Slc25a11	Mitochondrial 2-oxoglutarate/malate carrier protein	1	TSFHALTSILK	TSFHALTSILK	3	TSFHALTSILK3	57923.2	53694.5	66616.6
Q4V8H8	Q4V8H8	EHD2_RAT	Ehd2	EH domain-containing protein 2	1	TSFIQYLLEQEVPGSR	TSFIQYLLEQEVPGSR	3	TSFIQYLLEQEVPGSR3	2387.48		2956.96
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TSFLDDAFR	TSFLDDAFR	2	TSFLDDAFR2	69581.4	64623.9	66087.7
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TSFLDDAFRK	TSFLDDAFRK	2	TSFLDDAFRK2	28076.1	23080.6	33466.9
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TSFLDDAFRK	TSFLDDAFRK	3	TSFLDDAFRK3	98644	133527	90071.2
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	TSFLLNLR	TSFLLNLR	2	TSFLLNLR2	232482	256862	198941
Q6V9V9	Q6V9V9	Q6V9V9_RAT	Stk25	Serine/threonine kinase 25	1	TSFLTELIDR	TSFLTELIDR	2	TSFLTELIDR2	16268.3	13587.8	19582.4
P48199	P48199	CRP_RAT	Crp	C-reactive protein	1	TSFNEILLFWTR	TSFNEILLFWTR	2	TSFNEILLFWTR2	9.82095e+06	888671	693275
P48199	P48199	CRP_RAT	Crp	C-reactive protein	1	TSFNEILLFWTR	TSFNEILLFWTR	3	TSFNEILLFWTR3	110447	43195.8	67044.5
P05982	P05982	NQO1_RAT	Nqo1	NAD(P)H dehydrogenase [quinone] 1	1	TSFNYAMK	TSFNYAMK	2	TSFNYAMK2		1014.32	
F1M943	F1M943	F1M943_RAT	Armc8	Armadillo repeat-containing protein 8	1	TSFQDHAVWKPLMK	TSFQDHAVWKPLMK	3	TSFQDHAVWKPLMK3	2579.65	2211.03	1072.52
F1M943	F1M943	F1M943_RAT	Armc8	Armadillo repeat-containing protein 8	1	TSFQDHAVWKPLMK	TSFQDHAVWKPLMK	4	TSFQDHAVWKPLMK4	4006.29		3205.63
A0A8I5ZS17	A0A8I5ZS17	A0A8I5ZS17_RAT	Snx25	Sorting nexin 25	1	TSFSLSSFLEK	TSFSLSSFLEK	2	TSFSLSSFLEK2	3187.56	6061.91	4254.27
P40190	P40190	IL6RB_RAT	Il6st	Interleukin-6 receptor subunit beta	1	TSFTVQDLKPFTEYVFR	TSFTVQDLKPFTEYVFR	3	TSFTVQDLKPFTEYVFR3	11005.6		
A0A8I5ZUE7	A0A8I5ZUE7	A0A8I5ZUE7_RAT	Zc3h7b	Zinc finger CCCH-type containing 7B	1	TSFVGSYYLCK	TSFVGSYYLC(UniMod:4)K	2	TSFVGSYYLC(UniMod:4)K2	5466.86	5301.68	4755.5
Q6P685	Q6P685	Q6P685_RAT	Eif2s2	Eukaryotic translation initiation factor 2 subunit beta	1	TSFVNFTDICK	TSFVNFTDIC(UniMod:4)K	2	TSFVNFTDIC(UniMod:4)K2	68374.4	70038.6	79374.7
A0A8I6ANI3	A0A8I6ANI3	A0A8I6ANI3_RAT	Ctla2a	Cytotoxic T lymphocyte-associated protein 2 alpha	1	TSFYMGLNQFSDLTTEEFRR	TSFYMGLNQFSDLTTEEFRR	3	TSFYMGLNQFSDLTTEEFRR3	108472	176112	113329
A0A0U1RS29	A0A0U1RS29	A0A0U1RS29_RAT	Rgl2	Ral guanine nucleotide dissociation stimulator-like 2	1	TSGADMTFTPALLATHR	TSGADMTFTPALLATHR	3	TSGADMTFTPALLATHR3	3388.92	5925.88	5006.66
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	TSGAMLSSLPYK	TSGAMLSSLPYK	2	TSGAMLSSLPYK2	55968.6	47714.9	50388.6
M0R692	M0R692	M0R692_RAT	ENSRNOG00000069250	Ig-like domain-containing protein	1	TSGFTFSTSYMSWLK	TSGFTFSTSYMSWLK	2	TSGFTFSTSYMSWLK2	42919.3	20491.9	30337.1
P37285	A0A8I5Y868;P37285	KLC1_RAT	Klc1	Kinesin light chain 1	0	TSGHDHPDVATMLNILALVYR	TSGHDHPDVATMLNILALVYR	3	TSGHDHPDVATMLNILALVYR3	6227.53	5941.68	7452.02
P37285	A0A8I5Y868;P37285	KLC1_RAT	Klc1	Kinesin light chain 1	0	TSGHDHPDVATMLNILALVYR	TSGHDHPDVATMLNILALVYR	4	TSGHDHPDVATMLNILALVYR4	26052.2	25568.8	21690
P58751	P58751	RELN_RAT	Reln	Reelin	1	TSGITCIKPR	TSGITC(UniMod:4)IKPR	2	TSGITC(UniMod:4)IKPR2	24353.3	31535.6	23709.2
Q6UPR8	Q6UPR8	ERMP1_RAT	Ermp1	Endoplasmic reticulum metallopeptidase 1	1	TSGLQGEFDAR	TSGLQGEFDAR	2	TSGLQGEFDAR2	13427	9603.01	21793.5
Q6AXN4	Q6AXN4	NDC1_RAT	Ndc1	Nucleoporin NDC1	1	TSGSLVDTSYK	TSGSLVDTSYK	2	TSGSLVDTSYK2	4117.93	1650.09	4958.55
E9PU02	E9PU02	E9PU02_RAT	Trappc9	Trafficking protein particle complex subunit 9	1	TSGSTVEVIPALPR	TSGSTVEVIPALPR	2	TSGSTVEVIPALPR2	12310	7707.9	11019.2
A0A8I5ZU78	A0A8I5ZU78	A0A8I5ZU78_RAT	Lars2	leucine--tRNA ligase	1	TSGTAPQPQLLNNK	TSGTAPQPQLLNNK	2	TSGTAPQPQLLNNK2	2207.37	2382.87	1977.99
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	TSGTEEKDEVPSEDVK	TSGTEEKDEVPSEDVK	3	TSGTEEKDEVPSEDVK3	11509.9	15788.5	11429.2
F7F4L4	F7F4L4	F7F4L4_RAT	Dnajb12	DnaJ heat shock protein family (Hsp40) member B12	1	TSGTETPSANGEAGGGESTK	TSGTETPSANGEAGGGESTK	2	TSGTETPSANGEAGGGESTK2	2680.94		
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	TSGTLEAINQPSK	TSGTLEAINQPSK	2	TSGTLEAINQPSK2	40832.7	45183.3	40309.6
P08650	P08650	CO5_RAT	C5	Complement C5	1	TSGTMFCVK	TSGTMFC(UniMod:4)VK	2	TSGTMFC(UniMod:4)VK2	544161	475382	426190
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	TSGTPGNRPGSVIR	TSGTPGNRPGSVIR	3	TSGTPGNRPGSVIR3	145543	175827	155126
P29418	P29418	ATP5E_RAT	Atp5f1e	ATP synthase subunit epsilon, mitochondrial	1	TSGTSIK	TSGTSIK	1	TSGTSIK1			1279.68
A0A8I6AHX6	A0A8I6AHX6	A0A8I6AHX6_RAT	ENSRNOG00000063523	Ig-like domain-containing protein	1	TSGYTFSNYYMSWLK	TSGYTFSNYYMSWLK	2	TSGYTFSNYYMSWLK2	49481.9	23811.5	20794.2
P08721	P08721	OSTP_RAT	Spp1	Osteopontin	1	TSHESSQLDEPSVETHSLEQSK	TSHESSQLDEPSVETHSLEQSK	3	TSHESSQLDEPSVETHSLEQSK3	16977.1	18994	10800.4
P08721	P08721	OSTP_RAT	Spp1	Osteopontin	1	TSHESSQLDEPSVETHSLEQSK	TSHESSQLDEPSVETHSLEQSK	4	TSHESSQLDEPSVETHSLEQSK4	184346	206554	189545
B2RZC0	B2RZC0	B2RZC0_RAT	Aig1	Aig1 protein	1	TSHHQYPSR	TSHHQYPSR	2	TSHHQYPSR2			1400.34
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	TSHLECIR	TSHLEC(UniMod:4)IR	2	TSHLEC(UniMod:4)IR2	24130.2	25721.1	22072.4
F7ETI3	F7ETI3	F7ETI3_RAT	Wdr41	WD repeat domain 41	1	TSHLSDTGISALVEIPGNCVAAAVGR	TSHLSDTGISALVEIPGNC(UniMod:4)VAAAVGR	3	TSHLSDTGISALVEIPGNC(UniMod:4)VAAAVGR3	19681.5	8779.02	12345.2
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	TSHPVVIDMPEHNPGQMGGTMR	TSHPVVIDMPEHNPGQMGGTMR	3	TSHPVVIDMPEHNPGQMGGTMR3	132417	130571	130075
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	TSHPVVIDMPEHNPGQMGGTMR	TSHPVVIDMPEHNPGQMGGTMR	4	TSHPVVIDMPEHNPGQMGGTMR4	297242	331903	304343
A2VD12	A2VD12	PBIP1_RAT	Pbxip1	Pre-B-cell leukemia transcription factor-interacting protein 1	1	TSHQALESELQQLR	TSHQALESELQQLR	3	TSHQALESELQQLR3	9972.97	8619.26	9081.83
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	TSHSVDPSR	TSHSVDPSR	2	TSHSVDPSR2			18931.4
A0A8I5ZNG4	A0A8I5ZNG4	A0A8I5ZNG4_RAT	Rictor	RPTOR independent companion of MTOR, complex 2	1	TSHYLTPQANHLSLSK	TSHYLTPQANHLSLSK	4	TSHYLTPQANHLSLSK4	4030.95		10326.8
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	TSIAIDTIINQK	TSIAIDTIINQK	2	TSIAIDTIINQK2	835443	793286	795459
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	TSIAIDTIINQK	TSIAIDTIINQK	3	TSIAIDTIINQK3	59850.9	65191.9	67220.8
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	TSIDAYDNFDNISLAQR	TSIDAYDNFDNISLAQR	2	TSIDAYDNFDNISLAQR2	239322	240822	215151
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	TSIDAYDNFDNISLAQR	TSIDAYDNFDNISLAQR	3	TSIDAYDNFDNISLAQR3	139881	161540	139094
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	TSIECLPELIHACEGK	TSIEC(UniMod:4)LPELIHAC(UniMod:4)EGK	3	TSIEC(UniMod:4)LPELIHAC(UniMod:4)EGK3	23140	29652.7	30378.7
Q704E8	Q704E8	ABCB7_RAT	Abcb7	Iron-sulfur clusters transporter ABCB7, mitochondrial	1	TSIFIAHR	TSIFIAHR	2	TSIFIAHR2	9756.31	7106.98	
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	TSIFWNDVK	TSIFWNDVK	2	TSIFWNDVK2	17930.6	20856.6	17894.1
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	TSIFWNDVKDPVSIEER	TSIFWNDVKDPVSIEER	3	TSIFWNDVKDPVSIEER3	114829	162258	137613
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	TSIGWLR	TSIGWLR	2	TSIGWLR2	12377	11856	9040.82
P24155	P24155	THOP1_RAT	Thop1	Thimet oligopeptidase	1	TSILRPGGSEDASTMLK	TSILRPGGSEDASTMLK	3	TSILRPGGSEDASTMLK3	25931.5		
G3V619	G3V619	G3V619_RAT	Ascc1	Activating signal cointegrator 1 complex subunit 1	1	TSINIPK	TSINIPK	2	TSINIPK2	23559	27137.8	23163.9
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	TSISTASATVSPASSTESACTR	TSISTASATVSPASSTESAC(UniMod:4)TR	3	TSISTASATVSPASSTESAC(UniMod:4)TR3	63904.7	75016.3	57549.6
D4A6U4	D4A6U4	D4A6U4_RAT	Tecpr2	Tectonin beta-propeller repeat containing 2	1	TSITALAWSPNGMK	TSITALAWSPNGMK	2	TSITALAWSPNGMK2		1784.08	2065.39
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	TSIVHPPEDR	TSIVHPPEDR	3	TSIVHPPEDR3	11348.5	12388.5	8963.42
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	TSIVQAAAGGGTGGGSNNGK	TSIVQAAAGGGTGGGSNNGK	2	TSIVQAAAGGGTGGGSNNGK2	6964.07	10774.7	6021.26
Q63486	Q63486;Q63487	RRAGA_RAT	Rraga	Ras-related GTP-binding protein A	0	TSIWDETLYK	TSIWDETLYK	2	TSIWDETLYK2	17366.3	16964.7	32187.8
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	TSKPFNPLLGETFELDR	TSKPFNPLLGETFELDR	3	TSKPFNPLLGETFELDR3	9629.74	8207.13	7951.98
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	TSKPFNPLLGETFELDRLEENGYR	TSKPFNPLLGETFELDRLEENGYR	4	TSKPFNPLLGETFELDRLEENGYR4	29444.3	36228.9	35201.6
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	TSLAALEQIQTAK	TSLAALEQIQTAK	2	TSLAALEQIQTAK2	15272.5	8249.13	10461.7
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	TSLADQEEVR	TSLADQEEVR	2	TSLADQEEVR2	7301.46	8388.5	9906.67
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	TSLAGDTSNSSSPASTGAK	TSLAGDTSNSSSPASTGAK	2	TSLAGDTSNSSSPASTGAK2	16797.3	15786.9	12907.4
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	TSLAKPVAEKEEGEK	TSLAKPVAEKEEGEK	3	TSLAKPVAEKEEGEK3	34053.9	43921.3	40427.6
A0A8I6APK7	A0A8I6APK7	A0A8I6APK7_RAT	Fam114a2	Family with sequence similarity 114, member A2	1	TSLAKPVAEKEEGEK	TSLAKPVAEKEEGEK	4	TSLAKPVAEKEEGEK4	17673.6	15619.4	23260.9
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	TSLAQEK	TSLAQEK	2	TSLAQEK2	64747	48103.1	57521.9
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	TSLCYAPSWVCDGANDCGDYSDER	TSLC(UniMod:4)YAPSWVC(UniMod:4)DGANDC(UniMod:4)GDYSDER	3	TSLC(UniMod:4)YAPSWVC(UniMod:4)DGANDC(UniMod:4)GDYSDER3	4634.54	4602.98	3864.91
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	TSLDINK	TSLDINK	2	TSLDINK2	58614.4	63558.3	66460.4
P41565	P41565	IDHG1_RAT	Idh3g	Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial	1	TSLDLYANVIHCK	TSLDLYANVIHC(UniMod:4)K	2	TSLDLYANVIHC(UniMod:4)K2	15339.3	12290.3	9461.25
P41565	P41565	IDHG1_RAT	Idh3g	Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial	1	TSLDLYANVIHCK	TSLDLYANVIHC(UniMod:4)K	3	TSLDLYANVIHC(UniMod:4)K3	24313.4	19416	18286.6
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	TSLDVSNSVEPGFLAPGAR	TSLDVSNSVEPGFLAPGAR	2	TSLDVSNSVEPGFLAPGAR2	16523.3	12522.8	10666.4
Q6TA25	Q6TA25	FGOP2_RAT	Fgfr1op2	FGFR1 oncogene partner 2 homolog	1	TSLEEHQSALELIMSK	TSLEEHQSALELIMSK	3	TSLEEHQSALELIMSK3	26991.6	41199.4	30042
Q8CGU6	Q8CGU6	NICA_RAT	Ncstn	Nicastrin	1	TSLELWMHTDPMSQK	TSLELWMHTDPMSQK	3	TSLELWMHTDPMSQK3	30422.2	28549.8	17089.1
D3ZZL9	D3ZZL9	GCC2_RAT	Gcc2	GRIP and coiled-coil domain-containing protein 2	1	TSLENQTLSTR	TSLENQTLSTR	2	TSLENQTLSTR2	2185.33	1837.93	3016.03
Q5FVL8	Q5FVL8	Q5FVL8_RAT	Abcb10	ATP binding cassette subfamily B member 10	1	TSLFSSILR	TSLFSSILR	2	TSLFSSILR2	11047.2	8274.5	6969.94
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	TSLGDSVPCDHYCHNYLGGYYCSCR	TSLGDSVPC(UniMod:4)DHYC(UniMod:4)HNYLGGYYC(UniMod:4)SC(UniMod:4)R	4	TSLGDSVPC(UniMod:4)DHYC(UniMod:4)HNYLGGYYC(UniMod:4)SC(UniMod:4)R4	118988	127637	124693
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	TSLGPNGLDK	TSLGPNGLDK	2	TSLGPNGLDK2	331071	303814	308673
O88658	O88658	KIF1B_RAT	Kif1b	Kinesin-like protein KIF1B	1	TSLGQSMSK	TSLGQSMSK	2	TSLGQSMSK2	15179.7	10872.4	11600.2
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	TSLHIVDFLVQNSGNLDK	TSLHIVDFLVQNSGNLDK	3	TSLHIVDFLVQNSGNLDK3	30344.3	36129	28863.4
D3ZFK8	D3ZFK8	D3ZFK8_RAT	Farp2	FERM, ARH/RhoGEF and pleckstrin domain protein 2	1	TSLHTLTGDLPK	TSLHTLTGDLPK	3	TSLHTLTGDLPK3		1765.53	5765.6
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	TSLHYPESFHHPFHQK	TSLHYPESFHHPFHQK	3	TSLHYPESFHHPFHQK3	4369.18		
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	TSLHYPESFHHPFHQK	TSLHYPESFHHPFHQK	4	TSLHYPESFHHPFHQK4	18590.2	17530.2	26347.8
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	TSLILNK	TSLILNK	2	TSLILNK2	20303.1	20219	24316.2
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	TSLILNKDDIR	TSLILNKDDIR	3	TSLILNKDDIR3	3337.37	4745.46	10632.5
D3ZRB3	D3ZRB3	D3ZRB3_RAT	Rhof	Ras homolog family member F, filopodia associated	1	TSLLMVYCQGSFPEHYAPSVFEK	TSLLMVYC(UniMod:4)QGSFPEHYAPSVFEK	3	TSLLMVYC(UniMod:4)QGSFPEHYAPSVFEK3	36532.6	30974.1	35343.6
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	TSLLNTQPPR	TSLLNTQPPR	2	TSLLNTQPPR2	10257	16623	22498.2
Q5XIT3	Q5XIT3	YIPF2_RAT	Yipf2	Protein YIPF2	1	TSLLQDEKPQPR	TSLLQDEKPQPR	3	TSLLQDEKPQPR3	31750.3	30656.3	42409
D3ZHW0	D3ZHW0	D3ZHW0_RAT	Dhx29	ATP-dependent RNA helicase DHX29	1	TSLLTLEDVK	TSLLTLEDVK	2	TSLLTLEDVK2	7453.28	6583.56	10082.7
P09527	P09527	RAB7A_RAT	Rab7a	Ras-related protein Rab-7a	1	TSLMNQYVNK	TSLMNQYVNK	2	TSLMNQYVNK2	218115	195848	205043
P09527	P09527	RAB7A_RAT	Rab7a	Ras-related protein Rab-7a	1	TSLMNQYVNKK	TSLMNQYVNKK	2	TSLMNQYVNKK2	24208.6	23742.3	33395.6
P09527	P09527	RAB7A_RAT	Rab7a	Ras-related protein Rab-7a	1	TSLMNQYVNKK	TSLMNQYVNKK	3	TSLMNQYVNKK3	249937	217355	164353
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	TSLNGTIEHLK	TSLNGTIEHLK	3	TSLNGTIEHLK3	3327.92		3340.86
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	TSLNTWQGQGEETQVEAR	TSLNTWQGQGEETQVEAR	3	TSLNTWQGQGEETQVEAR3	4564.67	4299.88	4841.72
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	TSLPCIPR	TSLPC(UniMod:4)IPR	2	TSLPC(UniMod:4)IPR2	531027	511605	528908
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	TSLPSPMFSR	TSLPSPMFSR	2	TSLPSPMFSR2	114425	108684	103714
P97633	P97633	KC1A_RAT	Csnk1a1	Casein kinase I isoform alpha	1	TSLPWQGLK	TSLPWQGLK	2	TSLPWQGLK2	8036.98	8450.28	5857.43
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	TSLQQEQVK	TSLQQEQVK	2	TSLQQEQVK2	14378.3	10988.3	22628.2
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	TSLQQEQVKK	TSLQQEQVKK	2	TSLQQEQVKK2	4396.94	3109.41	3057.06
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	TSLQQEQVKK	TSLQQEQVKK	3	TSLQQEQVKK3	24466	23138	26497.3
A0A0G2K583	A0A0G2K583	A0A0G2K583_RAT	Mtap	S-methyl-5'-thioadenosine phosphorylase	1	TSLRPQTFYDGSHCSAR	TSLRPQTFYDGSHC(UniMod:4)SAR	4	TSLRPQTFYDGSHC(UniMod:4)SAR4	4484.7	3127.66	1286.55
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	TSLSALTQLMK	TSLSALTQLMK	2	TSLSALTQLMK2	40360.8	40773.5	45681.1
D3ZMI0	D3ZMI0	D3ZMI0_RAT	Angptl8	Angiopoietin-like 8	1	TSLSEIQAEEDTLHLR	TSLSEIQAEEDTLHLR	2	TSLSEIQAEEDTLHLR2	20229.3	18236.1	21537.5
D3ZMI0	D3ZMI0	D3ZMI0_RAT	Angptl8	Angiopoietin-like 8	1	TSLSEIQAEEDTLHLR	TSLSEIQAEEDTLHLR	3	TSLSEIQAEEDTLHLR3	311351	309760	260478
A0A8I6A678	A0A8I6A678	A0A8I6A678_RAT	Snx2	Sorting nexin-2	1	TSLSMFSK	TSLSMFSK	2	TSLSMFSK2	23525.4	22572.3	33157.2
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	TSLSPGSGVVTYYLR	TSLSPGSGVVTYYLR	2	TSLSPGSGVVTYYLR2		5922.15	8418.98
B5DEP5	B5DEP5	B5DEP5_RAT	Trip4	Thyroid hormone receptor interactor 4	1	TSLSVGPR	TSLSVGPR	2	TSLSVGPR2	30063.9	35609.3	28045.1
D4A0C3	D4A0C3	D4A0C3_RAT	Hid1	HID1 domain containing	1	TSLVATPGIDK	TSLVATPGIDK	2	TSLVATPGIDK2	4102.49	6056.21	2075.92
P16036	P16036	S25A3_RAT	Slc25a3	Solute carrier family 25 member 3	1	TSLYLAASASAEFFADIALAPMEAAK	TSLYLAASASAEFFADIALAPMEAAK	3	TSLYLAASASAEFFADIALAPMEAAK3	4445.6	2069.54	
Q641Y2	Q641Y2	NDUS2_RAT	Ndufs2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	1	TSMESLIHHFK	TSMESLIHHFK	3	TSMESLIHHFK3	44945.8	27536.3	29717.4
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	TSMGSNQASPAR	TSMGSNQASPAR	2	TSMGSNQASPAR2	38036.2	36258	39450.2
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	TSMLSPK	TSMLSPK	1	TSMLSPK1	2600.87		
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	TSMLSPK	TSMLSPK	2	TSMLSPK2	38962.4	36262	35711.3
Q4AEG6	Q4AEG6	BMP10_RAT	Bmp10	Bone morphogenetic protein 10	1	TSMPSANIIR	TSMPSANIIR	2	TSMPSANIIR2	31129.8	30385.2	23144.2
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	TSMVLVNYIYFK	TSMVLVNYIYFK	2	TSMVLVNYIYFK2	334146	304689	313470
P05544	A0A0G2JSK1;P05544;P05545	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	TSMVLVNYLLFK	TSMVLVNYLLFK	2	TSMVLVNYLLFK2	25074	34958	36249.7
P05544	A0A0G2JSK1;P05544;P05545	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	TSMVLVNYLLFK	TSMVLVNYLLFK	3	TSMVLVNYLLFK3	11739.8	13544.2	10535.3
Q5FWU0	Q5FWU0	Q5FWU0_RAT	Wasf2	Wiskott-Aldrich syndrome protein family member	1	TSMVSPSHPPPAPPLSSPPGPK	TSMVSPSHPPPAPPLSSPPGPK	3	TSMVSPSHPPPAPPLSSPPGPK3	26099.6	32727.4	20544.2
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	TSMVVLNINK	TSMVVLNINK	2	TSMVVLNINK2	33916.7	28631.9	34381
P07872	P07872	ACOX1_RAT	Acox1	Peroxisomal acyl-coenzyme A oxidase 1	1	TSNHAIVLAQLITQGECYGLHAFVVPIR	TSNHAIVLAQLITQGEC(UniMod:4)YGLHAFVVPIR	4	TSNHAIVLAQLITQGEC(UniMod:4)YGLHAFVVPIR4	9790.88	9118.83	5533.98
A0A8I5ZXX6	A0A8I6A3Z6;A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	0	TSNLNEELGQVK	TSNLNEELGQVK	2	TSNLNEELGQVK2	64372.9	66014.7	64300.8
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	TSNMNFVLIEFPIEEQDHLLVFR	TSNMNFVLIEFPIEEQDHLLVFR	3	TSNMNFVLIEFPIEEQDHLLVFR3	4058.58		6379.01
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	TSNPFLVAVQDSEADYVTTDTLSK	TSNPFLVAVQDSEADYVTTDTLSK	3	TSNPFLVAVQDSEADYVTTDTLSK3	7962	11901.8	13348.1
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	TSNPHRVPANLENVNFEVQTIEDDLK	TSNPHRVPANLENVNFEVQTIEDDLK	4	TSNPHRVPANLENVNFEVQTIEDDLK4		9891.31	5542.55
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	TSNSPTPDDELFQTLAK	TSNSPTPDDELFQTLAK	2	TSNSPTPDDELFQTLAK2	876249	628981	581500
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	TSNSPTPDDELFQTLAK	TSNSPTPDDELFQTLAK	3	TSNSPTPDDELFQTLAK3	264883	197595	235592
Q9JKC9	Q9JKC9	SYNRG_RAT	Synrg	Synergin gamma	1	TSNSQHGNSAPSLLIPLPGTK	TSNSQHGNSAPSLLIPLPGTK	3	TSNSQHGNSAPSLLIPLPGTK3	3642.47	7245.48	9040.62
Q5PPI8	Q5PPI8	Q5PPI8_RAT	Rmc1	Regulator of MON1-CCZ1	1	TSNSTGAEVVLYHLPR	TSNSTGAEVVLYHLPR	3	TSNSTGAEVVLYHLPR3	4087.65	1814.95	3239.33
G3V6A2	G3V6A2	G3V6A2_RAT	Slain2	SLAIN motif family, member 2	1	TSNTQVDSVK	TSNTQVDSVK	2	TSNTQVDSVK2	120927	144577	132851
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	TSPAGEAPSLAVK	TSPAGEAPSLAVK	2	TSPAGEAPSLAVK2	93436.1	96620.1	100988
A0A8I6ATU9	A0A8I6ATU9	A0A8I6ATU9_RAT	Atxn2	Ataxin 2	1	TSPAGGTWSSVVSGVPR	TSPAGGTWSSVVSGVPR	2	TSPAGGTWSSVVSGVPR2	6262.18	10591.5	7930.54
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	TSPAPSDSATTVK	TSPAPSDSATTVK	2	TSPAPSDSATTVK2	49619.7	45276.2	54048.1
P32198	P32198	CPT1A_RAT	Cpt1a	Carnitine O-palmitoyltransferase 1, liver isoform	1	TSPDAFIQLALQLAHYK	TSPDAFIQLALQLAHYK	3	TSPDAFIQLALQLAHYK3	4338.27	5246.8	2497.68
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	TSPDLGQVLLSLDDK	TSPDLGQVLLSLDDK	2	TSPDLGQVLLSLDDK2	1.19555e+06	777818	661685
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	TSPDLGQVLLSLDDK	TSPDLGQVLLSLDDK	3	TSPDLGQVLLSLDDK3	101352	125515	103640
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	TSPDLGQVLLSLDDKQK	TSPDLGQVLLSLDDKQK	2	TSPDLGQVLLSLDDKQK2	532797	490925	421771
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	TSPDLGQVLLSLDDKQK	TSPDLGQVLLSLDDKQK	3	TSPDLGQVLLSLDDKQK3	1.28886e+06	1.74213e+06	1.52145e+06
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	TSPDLVPMGDWTSR	TSPDLVPMGDWTSR	2	TSPDLVPMGDWTSR2	74148.5	57883.2	54838.8
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	TSPDTTFAEPTCLSASPPNAPPR	TSPDTTFAEPTC(UniMod:4)LSASPPNAPPR	3	TSPDTTFAEPTC(UniMod:4)LSASPPNAPPR3	46887	87095.6	67966.7
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	TSPEPQREDASPAPGTTAEEAMSR	TSPEPQREDASPAPGTTAEEAMSR	3	TSPEPQREDASPAPGTTAEEAMSR3	128273	121712	124464
A0A8I6A6I4	A0A8I6A6I4	A0A8I6A6I4_RAT	Atp11b	Phospholipid-transporting ATPase	1	TSPESETELIK	TSPESETELIK	2	TSPESETELIK2	10718.6	11118.2	9574.77
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	TSPFIHLSVAR	TSPFIHLSVAR	3	TSPFIHLSVAR3	10375.7	24710.4	27624.4
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	TSPGSPSPR	TSPGSPSPR	2	TSPGSPSPR2			11931.8
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	TSPLNFK	TSPLNFK	2	TSPLNFK2	177579	182291	168741
P11505	P11505	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	1	TSPNEGLSGNPADLER	TSPNEGLSGNPADLER	2	TSPNEGLSGNPADLER2	46172.2	41409.8	22638.9
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	TSPSDSMTK	TSPSDSMTK	2	TSPSDSMTK2	105998	142473	123328
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	TSPSKPSSAPALRPGPK	TSPSKPSSAPALRPGPK	3	TSPSKPSSAPALRPGPK3	8711.49	12257.9	15124.5
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	TSPSKPSSAPALRPGPK	TSPSKPSSAPALRPGPK	4	TSPSKPSSAPALRPGPK4	22041.6	14324.4	27376
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	TSPVASGSASK	TSPVASGSASK	2	TSPVASGSASK2			26794.1
P01015	P01015	ANGT_RAT	Agt	Angiotensinogen	1	TSPVDEK	TSPVDEK	1	TSPVDEK1	20643.6		
Q64542	Q64542	AT2B4_RAT	Atp2b4	Plasma membrane calcium-transporting ATPase 4	1	TSPVEGLSGNPADLEK	TSPVEGLSGNPADLEK	2	TSPVEGLSGNPADLEK2	23216.6	26720.1	25380.7
Q924K2	Q924K2	FAF1_RAT	Faf1	FAS-associated factor 1	1	TSPVQTR	TSPVQTR	2	TSPVQTR2	127733		35570.9
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	TSPVVAPTSEPSSPLHTQLLKDPEPAFQR	TSPVVAPTSEPSSPLHTQLLKDPEPAFQR	4	TSPVVAPTSEPSSPLHTQLLKDPEPAFQR4	3804.07	10715.7	6006.33
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	TSPYPVILSFENHVDSAK	TSPYPVILSFENHVDSAK	3	TSPYPVILSFENHVDSAK3			10606.1
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	TSQAADTLTIPLSR	TSQAADTLTIPLSR	2	TSQAADTLTIPLSR2	9036.76	8583.67	16368.1
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	TSQAALLALLEQELIER	TSQAALLALLEQELIER	2	TSQAALLALLEQELIER2	2965.57	2771.43	6096.74
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	TSQAALLALLEQELIER	TSQAALLALLEQELIER	3	TSQAALLALLEQELIER3	4084.99	2958.29	7849.47
Q8K3L6	Q8K3L6	GIMA5_RAT	Gimap5	GTPase IMAP family member 5	1	TSQAEMGTWEGR	TSQAEMGTWEGR	2	TSQAEMGTWEGR2	4010.34	3121.71	3526.77
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TSQCTLK	TSQC(UniMod:4)TLK	1	TSQC(UniMod:4)TLK1	24541		30957.8
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TSQCTLK	TSQC(UniMod:4)TLK	2	TSQC(UniMod:4)TLK2	1.29496e+06		1.3958e+06
D4A7R3	D4A7R3	D4A7R3_RAT	Nup205	Nucleoporin 205	1	TSQDFLFSQLQHLPFSNK	TSQDFLFSQLQHLPFSNK	3	TSQDFLFSQLQHLPFSNK3	5727.84	6529.33	
Q58NB7	Q58NB7	Q58NB7_RAT	Rarres1	Retinoic acid receptor responder (Tazarotene induced) 1	1	TSQFLHYYLIQLSSVK	TSQFLHYYLIQLSSVK	3	TSQFLHYYLIQLSSVK3	12225.5	18147.4	11397.3
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	TSQFTSSDLESTLEK	TSQFTSSDLESTLEK	2	TSQFTSSDLESTLEK2	10383.6	11406.7	14120.3
D4A529	D4A529	D4A529_RAT	She	Src homology 2 domain containing E	1	TSQGCVHIIVAQTK	TSQGC(UniMod:4)VHIIVAQTK	3	TSQGC(UniMod:4)VHIIVAQTK3	9235.29	5543.34	5252.52
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	TSQGNSFNPVWDEEPFDFPK	TSQGNSFNPVWDEEPFDFPK	3	TSQGNSFNPVWDEEPFDFPK3	14707.8	22349.1	30659.5
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	TSQIFLAK	TSQIFLAK	2	TSQIFLAK2	44465	34462.8	34512.9
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	TSQLLEK	TSQLLEK	1	TSQLLEK1	1905.78	3911.32	1206.09
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	TSQLLEK	TSQLLEK	2	TSQLLEK2	143085	164351	192419
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	TSQNALDFNTK	TSQNALDFNTK	2	TSQNALDFNTK2	33450.1	32643.1	32425.7
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	TSQPGGAALPGLR	TSQPGGAALPGLR	2	TSQPGGAALPGLR2	19337.9	21451.8	17210.9
A0A8J8YFS5	A0A8J8YFS5	A0A8J8YFS5_RAT	Hars1	Histidine--tRNA ligase, cytoplasmic	1	TSQPLSM	TSQPLSM	1	TSQPLSM1	10240.4	7284.74	6597.67
Q08851	Q08851	STX5_RAT	Stx5	Syntaxin-5	1	TSQQLQLIDEQDSYIQSR	TSQQLQLIDEQDSYIQSR	3	TSQQLQLIDEQDSYIQSR3	7429.04	6148.29	2596.75
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	TSQQNVSNASEGSTWNPFDDDNFSK	TSQQNVSNASEGSTWNPFDDDNFSK	3	TSQQNVSNASEGSTWNPFDDDNFSK3	47251.7	54740.2	55376.6
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	TSQSEEEEPPR	TSQSEEEEPPR	2	TSQSEEEEPPR2	2786.14	2630.36	2823.84
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	TSQSVSGEEVDTMEVQHLSQIVPK	TSQSVSGEEVDTMEVQHLSQIVPK	3	TSQSVSGEEVDTMEVQHLSQIVPK3	45587	46740.3	49704.9
A0A8I5ZVI9	A0A8I5ZVI9	A0A8I5ZVI9_RAT	Ranbp3	RAN binding protein 3	1	TSQSWVER	TSQSWVER	2	TSQSWVER2	20773.3	21487.8	16672.2
P24155	P24155	THOP1_RAT	Thop1	Thimet oligopeptidase	1	TSQTVATFLDELAR	TSQTVATFLDELAR	2	TSQTVATFLDELAR2	4289.25	9239.7	7196.75
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	TSRPENAIIYSNNEDFQVGQAK	TSRPENAIIYSNNEDFQVGQAK	3	TSRPENAIIYSNNEDFQVGQAK3	53946.3	44601.6	42888.5
A0A8I6AVC5	A0A8I6AVC5	A0A8I6AVC5_RAT	Ltbp3	Latent transforming growth factor beta binding protein 3	1	TSRPPVCEDIDECRDPSTCPDGK	TSRPPVC(UniMod:4)EDIDEC(UniMod:4)RDPSTC(UniMod:4)PDGK	4	TSRPPVC(UniMod:4)EDIDEC(UniMod:4)RDPSTC(UniMod:4)PDGK4	4164.26		
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	TSSAEMPTIPLGSAVEAIR	TSSAEMPTIPLGSAVEAIR	2	TSSAEMPTIPLGSAVEAIR2	279629	276447	278643
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	TSSAEMPTIPLGSAVEAIR	TSSAEMPTIPLGSAVEAIR	3	TSSAEMPTIPLGSAVEAIR3	29889.5	45714.5	60202.7
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	TSSAQVEGGVHGLHSYEK	TSSAQVEGGVHGLHSYEK	3	TSSAQVEGGVHGLHSYEK3	9377.39	5927.82	14953.1
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	TSSAQVEGGVHGLHSYEK	TSSAQVEGGVHGLHSYEK	4	TSSAQVEGGVHGLHSYEK4	17785.8	19393.4	41098.6
M0RCP2	M0RCP2	M0RCP2_RAT	Sh3pxd2b	SH3 and PX domains 2B	1	TSSASRPNFLAPLPHEMTQLR	TSSASRPNFLAPLPHEMTQLR	4	TSSASRPNFLAPLPHEMTQLR4	3773.66	11750.2	7724.91
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	TSSDHTDHAYVPSTFTK	TSSDHTDHAYVPSTFTK	2	TSSDHTDHAYVPSTFTK2	4265.09	12474.1	10482.7
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	TSSDHTDHAYVPSTFTK	TSSDHTDHAYVPSTFTK	3	TSSDHTDHAYVPSTFTK3	70976.9	68480.1	68433.2
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	TSSDHTDHAYVPSTFTK	TSSDHTDHAYVPSTFTK	4	TSSDHTDHAYVPSTFTK4	151643	156902	163352
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	TSSDPTCVEK	TSSDPTC(UniMod:4)VEK	2	TSSDPTC(UniMod:4)VEK2	21006.3	16709.1	
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	TSSDPTCVEKEK	TSSDPTC(UniMod:4)VEKEK	3	TSSDPTC(UniMod:4)VEKEK3	10897.8		11278.2
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	TSSEGVGTMR	TSSEGVGTMR	2	TSSEGVGTMR2	176518	162639	177979
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	TSSFHIK	TSSFHIK	2	TSSFHIK2	10657.7	17852.8	11589.9
E9PSY0	E9PSY0	E9PSY0_RAT	Axl	receptor protein-tyrosine kinase	1	TSSFSCEAHNAK	TSSFSC(UniMod:4)EAHNAK	2	TSSFSC(UniMod:4)EAHNAK2	5617.05	6180.83	6326.95
E9PSY0	E9PSY0	E9PSY0_RAT	Axl	receptor protein-tyrosine kinase	1	TSSFSCEAHNAK	TSSFSC(UniMod:4)EAHNAK	3	TSSFSC(UniMod:4)EAHNAK3	14383.8	15262.7	5743.19
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	TSSGECSPCDCNGNSHECLDGSGFCLHCQR	TSSGEC(UniMod:4)SPC(UniMod:4)DC(UniMod:4)NGNSHEC(UniMod:4)LDGSGFC(UniMod:4)LHC(UniMod:4)QR	4	TSSGEC(UniMod:4)SPC(UniMod:4)DC(UniMod:4)NGNSHEC(UniMod:4)LDGSGFC(UniMod:4)LHC(UniMod:4)QR4	3570.5	2127.48	9221.5
F1LP90	F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	1	TSSIATALNTSGAGGSRPAQAVR	TSSIATALNTSGAGGSRPAQAVR	3	TSSIATALNTSGAGGSRPAQAVR3	14567.5	5137.6	9049.77
A0A8I6A282	A0A8I6A282	A0A8I6A282_RAT	Antxr2	Anthrax toxin receptor	1	TSSIIIALTDGK	TSSIIIALTDGK	2	TSSIIIALTDGK2	94122.5	99529.2	94741.6
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	TSSISFEILGFNSK	TSSISFEILGFNSK	2	TSSISFEILGFNSK2	35594.8	33130.9	27901.1
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	TSSLAEAENMADLIDGYCR	TSSLAEAENMADLIDGYC(UniMod:4)R	3	TSSLAEAENMADLIDGYC(UniMod:4)R3	7456.68	11096.7	8334.23
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	TSSLDPHQSQQR	TSSLDPHQSQQR	2	TSSLDPHQSQQR2	8750.7		6350.09
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	TSSLDPHQSQQR	TSSLDPHQSQQR	3	TSSLDPHQSQQR3	20688.4		21957.9
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	TSSLLILTENENEK	TSSLLILTENENEK	2	TSSLLILTENENEK2	48827.5	52292.1	47433.9
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	TSSLLILTENENEKR	TSSLLILTENENEKR	3	TSSLLILTENENEKR3	3893.2	11982.7	5626.27
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	TSSLPESSPSK	TSSLPESSPSK	2	TSSLPESSPSK2	170729	186342	178008
A0A8I5Y6A1	A0A8I5Y6A1	A0A8I5Y6A1_RAT	Ablim1	Actin-binding LIM protein 1	1	TSSLPGYGK	TSSLPGYGK	2	TSSLPGYGK2	13300.4	12949.1	13097.3
G3V9L1	G3V9L1	G3V9L1_RAT	Tex2	Testis expressed 2	1	TSSLVLEK	TSSLVLEK	2	TSSLVLEK2	25651.9	20355.2	20385.5
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	TSSMEISSILQELK	TSSMEISSILQELK	2	TSSMEISSILQELK2	28364.2	27226.6	35157.7
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	TSSMEISSILQELKR	TSSMEISSILQELKR	3	TSSMEISSILQELKR3	4476.18	2433.7	
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	TSSMMMMGASEVAQEVEVR	TSSMMMMGASEVAQEVEVR	3	TSSMMMMGASEVAQEVEVR3	469410	572217	428827
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	TSSMMMMGASEVAQEVEVRETVRK	TSSMMMMGASEVAQEVEVRETVRK	4	TSSMMMMGASEVAQEVEVRETVRK4	11459.4	9608.21	11400.5
Q66H39	Q66H39	ABCF3_RAT	Abcf3	ATP-binding cassette sub-family F member 3	1	TSSPLVLEEASASQAGSR	TSSPLVLEEASASQAGSR	2	TSSPLVLEEASASQAGSR2	2246.39		2843.28
Q9EPX4	Q9EPX4	P2Y12_RAT	P2ry12	P2Y purinoceptor 12	1	TSSPSNLLGAK	TSSPSNLLGAK	2	TSSPSNLLGAK2	18390.3	14607.2	12930.3
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	TSSPTTLPPLAR	TSSPTTLPPLAR	2	TSSPTTLPPLAR2	4873.7	5004.32	5849.95
Q5XI55	Q5XI55	NGLY1_RAT	Ngly1	Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase	1	TSSQSFETGSVR	TSSQSFETGSVR	2	TSSQSFETGSVR2	4484.26		1352.98
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	TSSRPAMIGSLTDGSTETFWESGDEDKNK	TSSRPAMIGSLTDGSTETFWESGDEDKNK	4	TSSRPAMIGSLTDGSTETFWESGDEDKNK4	6914.61	4827.01	2675.01
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	TSSSFAAAMAR	TSSSFAAAMAR	2	TSSSFAAAMAR2	16220	19416.6	16882.1
A0A8I6G6W8	A0A8I5Y276;A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	TSSSHLPPPPK	TSSSHLPPPPK	2	TSSSHLPPPPK2	2512.16	2952.94	4485.9
A0A8I6G6W8	A0A8I5Y276;A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	TSSSHLPPPPK	TSSSHLPPPPK	3	TSSSHLPPPPK3	47428.7	45705.3	38730.5
P01836	P01835;F1LTN6;P01836	KACA_RAT		Ig kappa chain C region, A allele	0	TSSSPVVK	TSSSPVVK	1	TSSSPVVK1	599936	575461	
P01836	P01835;F1LTN6;P01836	KACA_RAT		Ig kappa chain C region, A allele	0	TSSSPVVK	TSSSPVVK	2	TSSSPVVK2	127761	6.37802e+07	7.31077e+07
P01836	P01835;F1LTN6;P01836	KACA_RAT		Ig kappa chain C region, A allele	0	TSSSPVVKSFNR	TSSSPVVKSFNR	3	TSSSPVVKSFNR3	8744.06		8360.7
P01836	P01835;F1LTN6;P01836	KACA_RAT		Ig kappa chain C region, A allele	0	TSSSPVVKSFNRNEC	TSSSPVVKSFNRNEC(UniMod:4)	3	TSSSPVVKSFNRNEC(UniMod:4)3	12186.9	19535.3	
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	TSSSSGGLTISSLLK	TSSSSGGLTISSLLK	2	TSSSSGGLTISSLLK2	7510.2	7309.51	9517.21
G3V9L1	G3V9L1	G3V9L1_RAT	Tex2	Testis expressed 2	1	TSSSSPLSSPSK	TSSSSPLSSPSK	2	TSSSSPLSSPSK2	6774.45	5622.07	7241.3
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	TSSSYTR	TSSSYTR	2	TSSSYTR2			58635.2
Q3B7T9	Q3B7T9	RFIP1_RAT	Rab11fip1	Rab11 family-interacting protein 1	1	TSSTDHTQPNQSNFSLPK	TSSTDHTQPNQSNFSLPK	3	TSSTDHTQPNQSNFSLPK3	3925.75	4723.81	4792.21
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	TSSTGEEEESLAILR	TSSTGEEEESLAILR	2	TSSTGEEEESLAILR2	8219.69	6667.02	12422.7
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	TSSTIVLQASK	TSSTIVLQASK	2	TSSTIVLQASK2	71037.9	70459.3	69699
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	TSSTLSEDQMSR	TSSTLSEDQMSR	2	TSSTLSEDQMSR2	15903.4	23178.1	16233.1
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	TSSVSSISQVSPER	TSSVSSISQVSPER	2	TSSVSSISQVSPER2	16146.9	14809.2	9159.58
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	TSSVVTLEVAK	TSSVVTLEVAK	2	TSSVVTLEVAK2	10079.2	16771	12870.5
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	TSTADYAMFR	TSTADYAMFR	2	TSTADYAMFR2	116828	110789	119304
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	TSTADYAMFR	TSTADYAMFR	3	TSTADYAMFR3	41231.9		28694.4
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	TSTANGLLLWQGVVK	TSTANGLLLWQGVVK	2	TSTANGLLLWQGVVK2		1195.49	
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	TSTAPLDR	TSTAPLDR	2	TSTAPLDR2	307903	237114	286298
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	TSTASSGDNYVTLWR	TSTASSGDNYVTLWR	2	TSTASSGDNYVTLWR2	12912.5	15192.6	15219
A0A8I6AQD7	A0A8I6AQD7	A0A8I6AQD7_RAT	ENSRNOG00000064041	Ig-like domain-containing protein	1	TSTDIDDDMNWYQQK	TSTDIDDDMNWYQQK	2	TSTDIDDDMNWYQQK2	150235	161165	158321
A0A8I6AQD7	A0A8I6AQD7	A0A8I6AQD7_RAT	ENSRNOG00000064041	Ig-like domain-containing protein	1	TSTDIDDDMNWYQQK	TSTDIDDDMNWYQQK	3	TSTDIDDDMNWYQQK3	20910.9	20480.8	20101.7
G3V904	G3V904	G3V904_RAT	Pld4	Phospholipase D family, member 4	1	TSTDLQVLAAHGAQIR	TSTDLQVLAAHGAQIR	3	TSTDLQVLAAHGAQIR3	6015.83	7963.4	7337.85
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	TSTDMAGSSALHPEAGGPWGLTQSSLDAR	TSTDMAGSSALHPEAGGPWGLTQSSLDAR	3	TSTDMAGSSALHPEAGGPWGLTQSSLDAR3	116591	119073	113638
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	TSTEEATEPQK	TSTEEATEPQK	2	TSTEEATEPQK2			14293
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	TSTESEVLK	TSTESEVLK	2	TSTESEVLK2	39782.4	38002.6	44503.1
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	TSTEVDGDLSAK	TSTEVDGDLSAK	2	TSTEVDGDLSAK2	15801.8	16705.4	8775.32
D4ABB8	D4ABB8	ATP9B_RAT	Atp9b	Probable phospholipid-transporting ATPase IIB	1	TSTIPEELGR	TSTIPEELGR	2	TSTIPEELGR2	10731.2	12611.5	16202.9
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TSTPEDFIR	TSTPEDFIR	2	TSTPEDFIR2	4.15707e+06	4.30388e+06	4.72482e+06
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	TSTPLTPLPVK	TSTPLTPLPVK	2	TSTPLTPLPVK2	21191.2	16059	29224.6
A0A8I5Y0Y2	A0A8I5Y0Y2	A0A8I5Y0Y2_RAT	Ddi2	DNA damage inducible 1 homolog 2	1	TSTPQGLDSPALLR	TSTPQGLDSPALLR	2	TSTPQGLDSPALLR2	13061	11190.7	
P11730	P11730	KCC2G_RAT	Camk2g	Calcium/calmodulin-dependent protein kinase type II subunit gamma	1	TSTQEYAAK	TSTQEYAAK	2	TSTQEYAAK2	12888.8		1280.83
E9PTX9	E9PTX9	E9PTX9_RAT	Slc12a2	Solute carrier family 12 member 2	1	TSTQPLLK	TSTQPLLK	2	TSTQPLLK2	30719.2	39429	45518.4
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	TSTSAVPNLFVPLNTNPK	TSTSAVPNLFVPLNTNPK	2	TSTSAVPNLFVPLNTNPK2	37132.1	38094.9	47587
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	TSTSAVPNLFVPLNTNPK	TSTSAVPNLFVPLNTNPK	3	TSTSAVPNLFVPLNTNPK3	26276.2	32864.2	24699.8
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	TSTSGAISELTESR	TSTSGAISELTESR	2	TSTSGAISELTESR2	108212	92437	100369
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	TSTSQAIFHLQSGICHLFR	TSTSQAIFHLQSGIC(UniMod:4)HLFR	3	TSTSQAIFHLQSGIC(UniMod:4)HLFR3	13532.8	14237.8	9220.43
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	TSTSQAIFHLQSGICHLFR	TSTSQAIFHLQSGIC(UniMod:4)HLFR	4	TSTSQAIFHLQSGIC(UniMod:4)HLFR4	24042.2	19078.1	14091.6
P50411	P50411	IPP2_RAT	Ppp1r2	Protein phosphatase inhibitor 2	1	TSTTSSVVASAEQPR	TSTTSSVVASAEQPR	2	TSTTSSVVASAEQPR2	28776.6	29242.1	28534.2
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	TSTVDLPIESQLLWQLDR	TSTVDLPIESQLLWQLDR	3	TSTVDLPIESQLLWQLDR3	91831.6	93423.6	76073.2
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	TSTVLTR	TSTVLTR	2	TSTVLTR2	294851	257371	260639
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	TSTVTTAHTSK	TSTVTTAHTSK	2	TSTVTTAHTSK2			12888.4
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	TSTVVCGQR	TSTVVC(UniMod:4)GQR	2	TSTVVC(UniMod:4)GQR2		164771	
P08650	P08650	CO5_RAT	C5	Complement C5	1	TSVAEEFCSFYLK	TSVAEEFC(UniMod:4)SFYLK	2	TSVAEEFC(UniMod:4)SFYLK2	250449	191175	186543
D3ZAR1	D3ZAR1	ARH_RAT	Ldlrap1	Low density lipoprotein receptor adapter protein 1	1	TSVATGNLLDLEELAK	TSVATGNLLDLEELAK	2	TSVATGNLLDLEELAK2	35318.2	21264.1	19811.5
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	TSVDFKDTDYK	TSVDFKDTDYK	2	TSVDFKDTDYK2	7527.33	9590.04	9724.78
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	TSVDFKDTDYK	TSVDFKDTDYK	3	TSVDFKDTDYK3	34886	43218.1	37037.5
Q3T1K5	Q3T1K5	CAZA2_RAT	Capza2	F-actin-capping protein subunit alpha-2	1	TSVETALR	TSVETALR	2	TSVETALR2	517832	537429	566251
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	TSVFLTTVAK	TSVFLTTVAK	2	TSVFLTTVAK2	5931.02	6419.4	
Q3B7D5	Q3B7D5;Q566C5	RASF2_RAT	Rassf2	Ras association domain-containing protein 2	0	TSVFTPAYGSVTNVR	TSVFTPAYGSVTNVR	2	TSVFTPAYGSVTNVR2	8418.61	5083.89	13935.8
Q63619	Q63619	COQ7_RAT	Coq7	5-demethoxyubiquinone hydroxylase, mitochondrial (Fragment)	1	TSVGPVIQK	TSVGPVIQK	2	TSVGPVIQK2	14265.3	12833.7	12855.1
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	TSVGVGLK	TSVGVGLK	2	TSVGVGLK2	32131.2	38920.1	24118.6
B4F7A1	B4F7A1	LYRM7_RAT	Lyrm7	Complex III assembly factor LYRM7	1	TSVIQGIHTDHDTLQLVPR	TSVIQGIHTDHDTLQLVPR	4	TSVIQGIHTDHDTLQLVPR4		8430.67	
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	TSVLEMIAQAR	TSVLEMIAQAR	2	TSVLEMIAQAR2	118494	130512	141364
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	TSVLFGLVTGTENQFASR	TSVLFGLVTGTENQFASR	2	TSVLFGLVTGTENQFASR2	8056.28		3873.4
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	TSVLLEQMMR	TSVLLEQMMR	2	TSVLLEQMMR2	12237	20622.7	16861.1
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	TSVLLSWEVPDSYK	TSVLLSWEVPDSYK	2	TSVLLSWEVPDSYK2	5327.88	2223.42	5113.44
A0A0G2K1Q8	A0A0G2K1Q8	ABCA3_RAT	Abca3	Phospholipid-transporting ATPase ABCA3	1	TSVLPEDQDVADER	TSVLPEDQDVADER	2	TSVLPEDQDVADER2	8284.42	8462.06	11790.6
P23640	P23640	RB27A_RAT	Rab27a	Ras-related protein Rab-27A	1	TSVLYQYTDGK	TSVLYQYTDGK	2	TSVLYQYTDGK2	135949	118371	151438
D3ZKN4	D3ZKN4	D3ZKN4_RAT	Whamm	WASP homolog associated with actin, golgi membranes and microtubules	1	TSVNEQVLAAIR	TSVNEQVLAAIR	2	TSVNEQVLAAIR2			3252.06
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	TSVPALETGEPTVLSQER	TSVPALETGEPTVLSQER	2	TSVPALETGEPTVLSQER2	18523.5	17251.7	23431.3
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	TSVPALETGEPTVLSQER	TSVPALETGEPTVLSQER	3	TSVPALETGEPTVLSQER3	7483.38	3564.83	3567.74
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	TSVQPTFTASQYR	TSVQPTFTASQYR	2	TSVQPTFTASQYR2	84324.1	107532	79847.4
Q01205	Q01205	ODO2_RAT	Dlst	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial	1	TSVQVPSPANGIIEALLVPDGGK	TSVQVPSPANGIIEALLVPDGGK	3	TSVQVPSPANGIIEALLVPDGGK3	2296.48		
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	TSVSQYNR	TSVSQYNR	2	TSVSQYNR2	16661.7	14408.3	
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	TSVVDLLYWR	TSVVDLLYWR	2	TSVVDLLYWR2	11105.4	11037	16213.1
D3ZM19	D3ZM19	D3ZM19_RAT	Evi2b	Ecotropic viral integration site 2B	1	TSVVSLMPWKPSK	TSVVSLMPWKPSK	2	TSVVSLMPWKPSK2	31483.9	21427.5	17671.9
D3ZM19	D3ZM19	D3ZM19_RAT	Evi2b	Ecotropic viral integration site 2B	1	TSVVSLMPWKPSK	TSVVSLMPWKPSK	3	TSVVSLMPWKPSK3	291507	259792	296451
D3ZF97	D3ZF97	D3ZF97_RAT	Erlec1	Endoplasmic reticulum lectin	1	TSVVVGTWNQEEHVEWAK	TSVVVGTWNQEEHVEWAK	3	TSVVVGTWNQEEHVEWAK3	2616.03		
A0A8I5ZTB8	A0A8I5Y1D5;A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	0	TSVVVHCSDGWDR	TSVVVHC(UniMod:4)SDGWDR	2	TSVVVHC(UniMod:4)SDGWDR2		2338.34	
A0A8I5ZTB8	A0A8I5Y1D5;A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	0	TSVVVHCSDGWDR	TSVVVHC(UniMod:4)SDGWDR	3	TSVVVHC(UniMod:4)SDGWDR3	12657.9	15755.2	12064.1
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	TSWINLK	TSWINLK	2	TSWINLK2	143365	138367	146727
P24368	P24368	PPIB_RAT	Ppib	Peptidyl-prolyl cis-trans isomerase B	1	TSWLDGK	TSWLDGK	1	TSWLDGK1	4717.93	2889.34	2501.28
P24368	P24368	PPIB_RAT	Ppib	Peptidyl-prolyl cis-trans isomerase B	1	TSWLDGK	TSWLDGK	2	TSWLDGK2	338182	277533	324953
D3ZIK0	D3ZIK0	D3ZIK0_RAT	Glce	heparosan-N-sulfate-glucuronate 5-epimerase	1	TSWSTVTR	TSWSTVTR	2	TSWSTVTR2	19783.9	12357.4	14734.8
A0A0G2JZA7	A0A0G2JZA7	A0A0G2JZA7_RAT	Cemip2	hyaluronoglucosaminidase	1	TSWTMLAR	TSWTMLAR	2	TSWTMLAR2	3298.93	5322.96	5244.27
P49242	P49242;M0R6L4	RS3A_RAT	Rps3a	Small ribosomal subunit protein eS1	0	TSYAQHQQVR	TSYAQHQQVR	2	TSYAQHQQVR2			2637.12
P49242	P49242;M0R6L4	RS3A_RAT	Rps3a	Small ribosomal subunit protein eS1	0	TSYAQHQQVR	TSYAQHQQVR	3	TSYAQHQQVR3			1511.58
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	TSYEWYIPK	TSYEWYIPK	2	TSYEWYIPK2	13259.7	10579.1	9881.6
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	TSYFIEFSVR	TSYFIEFSVR	2	TSYFIEFSVR2	598059	475296	421575
D3Z955	D3Z955	D3Z955_RAT	Pgm2l1	Phosphoglucomutase 2-like 1	1	TSYFLCYDPPTIK	TSYFLC(UniMod:4)YDPPTIK	2	TSYFLC(UniMod:4)YDPPTIK2	5662.37		
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	TSYGWIEIVGCADR	TSYGWIEIVGC(UniMod:4)ADR	2	TSYGWIEIVGC(UniMod:4)ADR2	2997.41		7918.02
B0LT89	B0LT89;A0A8I6GBQ0	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	0	TSYLTELIDR	TSYLTELIDR	2	TSYLTELIDR2	144754	143802	164238
B5DFI9	B5DFI9	B5DFI9_RAT	Pdk3	Protein-serine/threonine kinase	1	TSYMFLR	TSYMFLR	2	TSYMFLR2	25041.3	16385.6	12111.1
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	TSYQDCIK	TSYQDC(UniMod:4)IK	2	TSYQDC(UniMod:4)IK2	2.0443e+06	1.95893e+06	1.97851e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TSYRIGDTWSK	TSYRIGDTWSK	3	TSYRIGDTWSK3	73695	62252.7	127570
Q01129	Q01129	PGS2_RAT	Dcn	Decorin	1	TSYTAVSLYSNPVR	TSYTAVSLYSNPVR	2	TSYTAVSLYSNPVR2	28814.9	44448.6	32838.5
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	TSYVLSER	TSYVLSER	2	TSYVLSER2	28827.7	32479.3	29778.1
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	TSYYENVIK	TSYYENVIK	2	TSYYENVIK2	13929.7	12149	6578.96
Q6P6Q2	Q6P6Q2	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	1	TTAENEFVMLK	TTAENEFVMLK	2	TTAENEFVMLK2	22427.2	15949.3	20342.8
D3Z9L0	D3Z9L0	D3Z9L0_RAT	Agk	Acylglycerol kinase, mitochondrial	1	TTAGLCLLTWGGHWLYGK	TTAGLC(UniMod:4)LLTWGGHWLYGK	3	TTAGLC(UniMod:4)LLTWGGHWLYGK3	5346.32	6078.74	13668.6
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	TTAHFPHPPQCTLLVK	TTAHFPHPPQC(UniMod:4)TLLVK	3	TTAHFPHPPQC(UniMod:4)TLLVK3	17926.4	10332.8	6811.21
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	TTAHFPHPPQCTLLVK	TTAHFPHPPQC(UniMod:4)TLLVK	4	TTAHFPHPPQC(UniMod:4)TLLVK4	39130.3	44336.5	24404.9
P49745	P49745	TPO_RAT	Thpo	Thrombopoietin	1	TTAHKDPSALFLSLQQLLR	TTAHKDPSALFLSLQQLLR	4	TTAHKDPSALFLSLQQLLR4		3610.48	
Q63448	Q63448	ACOX3_RAT	Acox3	Peroxisomal acyl-coenzyme A oxidase 3	1	TTAHYDPATQEFILHSPDFEAAK	TTAHYDPATQEFILHSPDFEAAK	4	TTAHYDPATQEFILHSPDFEAAK4	14951.3	15630.9	17403.5
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	TTAIIAEYK	TTAIIAEYK	2	TTAIIAEYK2	56032.5	55381.3	79282.1
A0A096MJT6	A0A096MJT6	A0A096MJT6_RAT	Bltp1	Similar to RIKEN cDNA D630029K19	1	TTAIVEVK	TTAIVEVK	2	TTAIVEVK2	4584.81		6809.04
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	TTALLLPGIIK	TTALLLPGIIK	2	TTALLLPGIIK2	92716.4	80271.6	48496.7
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	TTALPAASVSQTDENK	TTALPAASVSQTDENK	2	TTALPAASVSQTDENK2	51121.5	44443.3	38352.1
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	TTANAIYCPPK	TTANAIYC(UniMod:4)PPK	2	TTANAIYC(UniMod:4)PPK2	68156.8	67967.2	80485.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TTANLHAPIFTMNFK	TTANLHAPIFTMNFK	2	TTANLHAPIFTMNFK2	48902.2	75338.4	49316.4
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TTANLHAPIFTMNFK	TTANLHAPIFTMNFK	3	TTANLHAPIFTMNFK3	434077	540299	472790
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	TTAPGGSASSGTK	TTAPGGSASSGTK	2	TTAPGGSASSGTK2			17442
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	TTAPSVYPLVPGCSGTSGSLVTLGCLVK	TTAPSVYPLVPGC(UniMod:4)SGTSGSLVTLGC(UniMod:4)LVK	3	TTAPSVYPLVPGC(UniMod:4)SGTSGSLVTLGC(UniMod:4)LVK3	1.2754e+07	1.45911e+07	1.66218e+07
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	TTAPSVYPLVPGCSGTSGSLVTLGCLVK	TTAPSVYPLVPGC(UniMod:4)SGTSGSLVTLGC(UniMod:4)LVK	4	TTAPSVYPLVPGC(UniMod:4)SGTSGSLVTLGC(UniMod:4)LVK4	243546	268657	199302
P07943	P07943;A0A8I6ASF1;A0A8I6AEH6	ALDR_RAT	Akr1b1	Aldo-keto reductase family 1 member B1	0	TTAQVLIR	TTAQVLIR	2	TTAQVLIR2	32354.5	27437.4	23747.7
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	TTASPSVR	TTASPSVR	2	TTASPSVR2	223826	233911	226895
D3ZCG2	D3ZCG2;F1M5N7	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	0	TTASTQMNVQSSR	TTASTQMNVQSSR	2	TTASTQMNVQSSR2	8942.5	8761.63	5783.76
P08483	P08483	ACM3_RAT	Chrm3	Muscarinic acetylcholine receptor M3	1	TTATLPLSFK	TTATLPLSFK	2	TTATLPLSFK2	2291.98	2793.47	
D3ZJZ0	D3ZJZ0	D3ZJZ0_RAT	Tmem205	Transmembrane protein 205	1	TTATMWALQSIEK	TTATMWALQSIEK	2	TTATMWALQSIEK2	88100.4	87785.8	91546.7
D3ZJZ0	D3ZJZ0	D3ZJZ0_RAT	Tmem205	Transmembrane protein 205	1	TTATMWALQSIEK	TTATMWALQSIEK	3	TTATMWALQSIEK3	18878.1	16250.7	17808.5
D3ZJZ0	D3ZJZ0	D3ZJZ0_RAT	Tmem205	Transmembrane protein 205	1	TTATMWALQSIEKER	TTATMWALQSIEKER	3	TTATMWALQSIEKER3	23495.3	26903.4	20449.8
P54777	P54777	PEX6_RAT	Pex6	Peroxisomal ATPase PEX6	1	TTAVTAACSR	TTAVTAAC(UniMod:4)SR	2	TTAVTAAC(UniMod:4)SR2	5085.67		5543.96
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	TTAVVAPDDPMAACK	TTAVVAPDDPMAAC(UniMod:4)K	2	TTAVVAPDDPMAAC(UniMod:4)K2	2678.14	1982.92	989.134
E9PSX8	E9PSX8	E9PSX8_RAT	Sipa1	Signal-induced proliferation-associated 1	1	TTAYSLEHADLGAGYYR	TTAYSLEHADLGAGYYR	3	TTAYSLEHADLGAGYYR3	5179.1	8056.33	6460.73
P29994	P29994;P29995;Q63269	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	0	TTCFICGLER	TTC(UniMod:4)FIC(UniMod:4)GLER	2	TTC(UniMod:4)FIC(UniMod:4)GLER2	97631.6	82894.8	71545.2
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	TTCHTVMEVLR	TTC(UniMod:4)HTVMEVLR	3	TTC(UniMod:4)HTVMEVLR3	13659.9	14853.3	4375.59
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	TTCPQVLIQK	TTC(UniMod:4)PQVLIQK	2	TTC(UniMod:4)PQVLIQK2	25557.2	24986.4	26748.8
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	TTCQDISECQTSPAR	TTC(UniMod:4)QDISEC(UniMod:4)QTSPAR	2	TTC(UniMod:4)QDISEC(UniMod:4)QTSPAR2	376816	406417	375060
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	TTCQDISECQTSPAR	TTC(UniMod:4)QDISEC(UniMod:4)QTSPAR	3	TTC(UniMod:4)QDISEC(UniMod:4)QTSPAR3	195668	239317	249509
G3V9T7	G3V9T7	GET3_RAT	Get3	ATPase Get3	1	TTCSCSLAVQLSK	TTC(UniMod:4)SC(UniMod:4)SLAVQLSK	2	TTC(UniMod:4)SC(UniMod:4)SLAVQLSK2	23592	18842.1	22380.1
A0A8I6A7G4	A0A8I6A7G4	A0A8I6A7G4_RAT	Cmtm7	CKLF-like MARVEL transmembrane domain containing 7	1	TTCSSGGAPGPSQPSEGLLDPVYPR	TTC(UniMod:4)SSGGAPGPSQPSEGLLDPVYPR	3	TTC(UniMod:4)SSGGAPGPSQPSEGLLDPVYPR3	8335.46	6164.77	7462.37
Q4V885	Q4V885	COL12_RAT	Colec12	Collectin-12	1	TTCTDTLTR	TTC(UniMod:4)TDTLTR	2	TTC(UniMod:4)TDTLTR2	12594.5	7747.44	11231.9
P18292	P18292	THRB_RAT	F2	Prothrombin	1	TTDAEFHTFFDER	TTDAEFHTFFDER	2	TTDAEFHTFFDER2	3.24186e+06	3.35492e+06	3.44321e+06
P18292	P18292	THRB_RAT	F2	Prothrombin	1	TTDAEFHTFFDER	TTDAEFHTFFDER	3	TTDAEFHTFFDER3	141227	155494	126269
P18292	P18292	THRB_RAT	F2	Prothrombin	1	TTDAEFHTFFDERTFGLGEADCGLRPLFEK	TTDAEFHTFFDERTFGLGEADC(UniMod:4)GLRPLFEK	4	TTDAEFHTFFDERTFGLGEADC(UniMod:4)GLRPLFEK4	11386.9	19698.3	17065.3
Q9QZH7	Q9QZH7	FXL20_RAT	Fbxl20	F-box/LRR-repeat protein 20	1	TTDATCTSLSK	TTDATC(UniMod:4)TSLSK	2	TTDATC(UniMod:4)TSLSK2	12492.4	8206.78	12232.1
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	TTDDVVK	TTDDVVK	2	TTDDVVK2		35756.5	
D4A4T9	D4A4T9	CHRD1_RAT	Chordc1	Cysteine and histidine-rich domain-containing protein 1	1	TTDFSDFLSIVGCTK	TTDFSDFLSIVGC(UniMod:4)TK	2	TTDFSDFLSIVGC(UniMod:4)TK2	11875.4	5720.25	8660.39
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	TTDGVYEGVAIGGDR	TTDGVYEGVAIGGDR	2	TTDGVYEGVAIGGDR2	5960.65	5732.76	
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	TTDGVYEGVAIGGDRYPGSTFMDHVLR	TTDGVYEGVAIGGDRYPGSTFMDHVLR	3	TTDGVYEGVAIGGDRYPGSTFMDHVLR3	7257.06	10682.6	
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	TTDGVYEGVAIGGDRYPGSTFMDHVLR	TTDGVYEGVAIGGDRYPGSTFMDHVLR	4	TTDGVYEGVAIGGDRYPGSTFMDHVLR4	22678.7	14327.1	25033.5
P49242	P49242;A0A8I6ABN0;M0R6L4	RS3A_RAT	Rps3a	Small ribosomal subunit protein eS1	0	TTDGYLLR	TTDGYLLR	2	TTDGYLLR2	46363.9	38969.3	34418
P37805	P37805	TAGL3_RAT	Tagln3	Transgelin-3	1	TTDIFQTVDLWEGK	TTDIFQTVDLWEGK	2	TTDIFQTVDLWEGK2	3162.89	10230.6	5680.6
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	TTDIVIR	TTDIVIR	2	TTDIVIR2	838164	895021	964993
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TTDLLTDWEK	TTDLLTDWEK	2	TTDLLTDWEK2	170434	243023	198617
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	TTDLQLSDVFLK	TTDLQLSDVFLK	2	TTDLQLSDVFLK2	40845.9	27650.6	39883.2
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	TTDPPNQGR	TTDPPNQGR	2	TTDPPNQGR2			35661
A0A8I6GLR1	A0A8I6GLR1	A0A8I6GLR1_RAT	Col18a1	Collagen type XVIII alpha 1 chain	1	TTDSLEAR	TTDSLEAR	2	TTDSLEAR2	277201	297189	281252
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	TTDTASVQNEAK	TTDTASVQNEAK	2	TTDTASVQNEAK2	973.177	561404	
A0A8I6A4K6	A0A8I6A4K6	A0A8I6A4K6_RAT	Psmg1	Proteasome assembly chaperone 1	1	TTDTVHLSPTDVFCVFYQLK	TTDTVHLSPTDVFC(UniMod:4)VFYQLK	3	TTDTVHLSPTDVFC(UniMod:4)VFYQLK3	2513.29		5261.93
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	TTDVEGR	TTDVEGR	2	TTDVEGR2			81330.6
B5DFN2	B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	1	TTDVMFGGK	TTDVMFGGK	2	TTDVMFGGK2	115892	108763	121998
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	TTDVTQTFAIEK	TTDVTQTFAIEK	2	TTDVTQTFAIEK2	411240	368117	363556
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	TTDVTSLCTPEAFR	TTDVTSLC(UniMod:4)TPEAFR	2	TTDVTSLC(UniMod:4)TPEAFR2	24177.9	24249.3	28667.2
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	TTEAQDLQDEVQR	TTEAQDLQDEVQR	2	TTEAQDLQDEVQR2	52680.9	49684.7	59241
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	TTEAQDLQDEVQR	TTEAQDLQDEVQR	3	TTEAQDLQDEVQR3	19579.4	41355.7	41888.7
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	TTEDEIHICR	TTEDEIHIC(UniMod:4)R	2	TTEDEIHIC(UniMod:4)R2		2358.16	
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	TTEDEIHICR	TTEDEIHIC(UniMod:4)R	3	TTEDEIHIC(UniMod:4)R3	42163.6	44273.9	31469.2
P50503	P50503	F10A1_RAT	St13	Hsc70-interacting protein	1	TTEDNIK	TTEDNIK	2	TTEDNIK2			242235
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	TTEEDRGSYYCVVSAWTR	TTEEDRGSYYC(UniMod:4)VVSAWTR	3	TTEEDRGSYYC(UniMod:4)VVSAWTR3	4699.94	5159.97	3679.86
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	TTEELGSPSK	TTEELGSPSK	2	TTEELGSPSK2	11104.5	4535.74	9174.6
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	TTEELNEALSAK	TTEELNEALSAK	2	TTEELNEALSAK2	32383.7	40050.1	32927.8
D4A7D3	D4A7D3	D4A7D3_RAT	Tbk1	TANK-binding kinase 1	1	TTEENPIFVTSR	TTEENPIFVTSR	2	TTEENPIFVTSR2	4881.62	5665.22	6772.15
D3ZFK6	D3ZFK6	D3ZFK6_RAT	Atg16l1	Autophagy related 16-like 1	1	TTEENQELVTR	TTEENQELVTR	2	TTEENQELVTR2	10738.5	9839.7	7122.55
Q501R9	Q501R9	NBR1_RAT	Nbr1	Next to BRCA1 gene 1 protein	1	TTEEPTAEAR	TTEEPTAEAR	2	TTEEPTAEAR2	1228.55		1294.66
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	TTEFWNK	TTEFWNK	1	TTEFWNK1	105240	107210	91917.2
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	TTEFWNK	TTEFWNK	2	TTEFWNK2	2.98153e+06	3.21823e+06	3.24304e+06
Q5XII9	Q5XII9	MFR1L_RAT	Mtfr1l	Mitochondrial fission regulator 1-like	1	TTELQDELSHLR	TTELQDELSHLR	3	TTELQDELSHLR3	5282.28	6850.31	8414.07
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	TTEMETIYDLGTK	TTEMETIYDLGTK	2	TTEMETIYDLGTK2	48343.5	51052.3	49278.2
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	TTEMETIYDLGTK	TTEMETIYDLGTK	3	TTEMETIYDLGTK3	10599.4	10712.1	7153.7
Q562B5	Q562B5	PGAM5_RAT	Pgam5	Serine/threonine-protein phosphatase PGAM5, mitochondrial	1	TTEPLAWTGAR	TTEPLAWTGAR	2	TTEPLAWTGAR2	37097.9	28866.2	39068.9
Q63372	Q63372	NRX1A_RAT	Nrxn1	Neurexin-1	1	TTEPNGLILFSHGKPR	TTEPNGLILFSHGKPR	4	TTEPNGLILFSHGKPR4	9009.77	7774.56	5646.51
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	TTEQEATVTPK	TTEQEATVTPK	2	TTEQEATVTPK2	20525.2	10628.4	9562.69
B4F779	B4F779	DP13B_RAT	Appl2	DCC-interacting protein 13-beta	1	TTESHLMVTSQTLR	TTESHLMVTSQTLR	3	TTESHLMVTSQTLR3	4177.95	3884.41	
Q9ET64	Q9ET64	NSMA_RAT	Smpd2	Sphingomyelin phosphodiesterase 2	1	TTETQDLGSEPHPTHCR	TTETQDLGSEPHPTHC(UniMod:4)R	3	TTETQDLGSEPHPTHC(UniMod:4)R3	11775.2	9997.55	5519.03
Q9ET64	Q9ET64	NSMA_RAT	Smpd2	Sphingomyelin phosphodiesterase 2	1	TTETQDLGSEPHPTHCR	TTETQDLGSEPHPTHC(UniMod:4)R	4	TTETQDLGSEPHPTHC(UniMod:4)R4	56435.9	51646.9	53861.7
F1M9C9	F1M9C9	F1M9C9_RAT	Hars2	histidine--tRNA ligase	1	TTETQVFVATPQK	TTETQVFVATPQK	2	TTETQVFVATPQK2	4423.16	3725.06	1348.49
A0A8J8YFS5	A0A8J8YFS5	A0A8J8YFS5_RAT	Hars1	Histidine--tRNA ligase, cytoplasmic	1	TTETQVLVASAQK	TTETQVLVASAQK	2	TTETQVLVASAQK2	6097.96	3671.7	4190.28
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	TTEYHDRDEQFYWIIEALGIR	TTEYHDRDEQFYWIIEALGIR	3	TTEYHDRDEQFYWIIEALGIR3	8125.79		1698.54
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	TTEYHDRDEQFYWIIEALGIR	TTEYHDRDEQFYWIIEALGIR	4	TTEYHDRDEQFYWIIEALGIR4	13259.1	5918.75	7420.68
G3V9A3	Q5EBB0;G3V9A3	G3V9A3_RAT	Sfn	Stratifin	0	TTFDEAMADLHTLSEDSYK	TTFDEAMADLHTLSEDSYK	3	TTFDEAMADLHTLSEDSYK3	15026.7	15443.6	9208.03
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	TTFEDLIQR	TTFEDLIQR	2	TTFEDLIQR2	83342.2	82722.7	85763.8
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	TTFELIYQELLQR	TTFELIYQELLQR	2	TTFELIYQELLQR2	95284.6	84221.6	76504
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	TTFELIYQELLQR	TTFELIYQELLQR	3	TTFELIYQELLQR3	345261	294494	347875
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	TTFELIYQELLQRR	TTFELIYQELLQRR	3	TTFELIYQELLQRR3	13194.2	3192.28	10805.2
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	TTFFHHEYPWILSASDDQTIR	TTFFHHEYPWILSASDDQTIR	3	TTFFHHEYPWILSASDDQTIR3	46936.1	48892.5	41530.3
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	TTFFHHEYPWILSASDDQTIR	TTFFHHEYPWILSASDDQTIR	4	TTFFHHEYPWILSASDDQTIR4	77105.9	63178.1	64252.4
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	TTFQLELPVK	TTFQLELPVK	2	TTFQLELPVK2	61484.4	73651.6	66431.2
A1L1J9	A1L1J9	LMF2_RAT	Lmf2	Lipase maturation factor 2	1	TTFTFHQFSQWLK	TTFTFHQFSQWLK	3	TTFTFHQFSQWLK3	15483.1	14768.8	8068.63
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	TTFTIEIK	TTFTIEIK	2	TTFTIEIK2	65257.8	55855.1	60160.3
Q66HA6	Q66HA6	ARL8B_RAT	Arl8b	ADP-ribosylation factor-like protein 8B	1	TTFVNVIASGQFSEDMIPTVGFNMR	TTFVNVIASGQFSEDMIPTVGFNMR	3	TTFVNVIASGQFSEDMIPTVGFNMR3	70174	61210.9	
P56603	P56603	SCAM1_RAT	Scamp1	Secretory carrier-associated membrane protein 1	1	TTGASFEK	TTGASFEK	1	TTGASFEK1	963.098	3447.87	878.923
P56603	P56603	SCAM1_RAT	Scamp1	Secretory carrier-associated membrane protein 1	1	TTGASFEK	TTGASFEK	2	TTGASFEK2	261983	269142	335276
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	TTGEELCNGHGLWVK	TTGEELC(UniMod:4)NGHGLWVK	3	TTGEELC(UniMod:4)NGHGLWVK3	22202.4	21910.3	29913.6
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	TTGEVVSGVVSK	TTGEVVSGVVSK	2	TTGEVVSGVVSK2	143652	164943	165886
Q9JI03	Q9JI03	CO5A1_RAT	Col5a1	Collagen alpha-1(V) chain	1	TTGFCATR	TTGFC(UniMod:4)ATR	2	TTGFC(UniMod:4)ATR2	73165.8	76465	72798.1
P20909	P20909	COBA1_RAT	Col11a1	Collagen alpha-1(XI) chain	1	TTGFCTSR	TTGFC(UniMod:4)TSR	2	TTGFC(UniMod:4)TSR2	91883.3	119900	108620
P62850	P62850;A0A8I5Y191;D4ACJ1	RS24_RAT	Rps24	Small ribosomal subunit protein eS24	0	TTGFGMIYDSLDYAK	TTGFGMIYDSLDYAK	2	TTGFGMIYDSLDYAK2	24153.1	28085.8	4359.09
D3ZFF4	D3ZFF4	D3ZFF4_RAT	Lclat1	Lysocardiolipin acyltransferase 1	1	TTGFTFVVDR	TTGFTFVVDR	2	TTGFTFVVDR2	12436.9	12373.1	9728.28
Q9WUK5	Q9WUK5	INHBC_RAT	Inhbc	Inhibin beta C chain	1	TTGGVEVLQTR	TTGGVEVLQTR	2	TTGGVEVLQTR2	243778	221276	254499
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	TTGHMFHIDFGR	TTGHMFHIDFGR	3	TTGHMFHIDFGR3		5328.67	6774.44
Q4G002	Q4G002	Q4G002_RAT	RT1-T24-4	Histocompatibility 2, T region locus 24	1	TTGHWQYGYDGR	TTGHWQYGYDGR	3	TTGHWQYGYDGR3	2978.67	7156.86	
A0A8I5Y4X4	A0A8I5Y4X4	A0A8I5Y4X4_RAT	Nub1	Negative regulator of ubiquitin-like proteins 1	1	TTGIATIEVFLPPR	TTGIATIEVFLPPR	2	TTGIATIEVFLPPR2	23918	16797	21115.1
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	TTGINVR	TTGINVR	2	TTGINVR2	633457	533188	589687
P04897	P59215;P10824;P04897;P08753	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	0	TTGIVETHFTFK	TTGIVETHFTFK	2	TTGIVETHFTFK2	90502.1	77713.2	78143
P04897	P59215;P10824;P04897;P08753	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	0	TTGIVETHFTFK	TTGIVETHFTFK	3	TTGIVETHFTFK3	136245	95097.9	125003
P68136	P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	TTGIVLDSGDGVTHNVPIYEGYALPHAIMR	TTGIVLDSGDGVTHNVPIYEGYALPHAIMR	4	TTGIVLDSGDGVTHNVPIYEGYALPHAIMR4	33566.4	31834.9	33825.7
P60711	P60711;P63259;A0A8I5Y704	ACTB_RAT	Actb	Actin, cytoplasmic 1	0	TTGIVMDSGDGVTHTVPIYEGYALPHAILR	TTGIVMDSGDGVTHTVPIYEGYALPHAILR	4	TTGIVMDSGDGVTHTVPIYEGYALPHAILR4	621512	600266	665820
P0C1S9	P0C1S9	DGLB_RAT	Daglb	Diacylglycerol lipase-beta	1	TTGLQYR	TTGLQYR	2	TTGLQYR2	58343.5	63826.1	67892.9
Q63362	A0A8I6AIC3;Q63362	NDUA5_RAT	Ndufa5	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5	0	TTGLVGLAVCDTPHER	TTGLVGLAVC(UniMod:4)DTPHER	2	TTGLVGLAVC(UniMod:4)DTPHER2	14861.6	9260.56	9999.76
Q63362	A0A8I6AIC3;Q63362	NDUA5_RAT	Ndufa5	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5	0	TTGLVGLAVCDTPHER	TTGLVGLAVC(UniMod:4)DTPHER	3	TTGLVGLAVC(UniMod:4)DTPHER3	55395.8	60025.4	45021.6
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	TTGQCSCLPNVIGQNCDR	TTGQC(UniMod:4)SC(UniMod:4)LPNVIGQNC(UniMod:4)DR	3	TTGQC(UniMod:4)SC(UniMod:4)LPNVIGQNC(UniMod:4)DR3	32475.9	37231.2	43231.1
A0A8I6AEI1	A0A8I6AEI1	A0A8I6AEI1_RAT	Hps1	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1	1	TTGQMVAPSLSPSEK	TTGQMVAPSLSPSEK	2	TTGQMVAPSLSPSEK2	29854.4	29226.1	39621.6
D3ZF92	D3ZF92	TNR21_RAT	Tnfrsf21	Tumor necrosis factor receptor superfamily member 21	1	TTGQVLTCDK	TTGQVLTC(UniMod:4)DK	2	TTGQVLTC(UniMod:4)DK2	5426.96	3784.85	6112.71
A0A0U1RS29	A0A0U1RS29	A0A0U1RS29_RAT	Rgl2	Ral guanine nucleotide dissociation stimulator-like 2	1	TTGVAISVLSTWLASHPEDFGSEVK	TTGVAISVLSTWLASHPEDFGSEVK	3	TTGVAISVLSTWLASHPEDFGSEVK3	2924.38		
P85515	F7F067;P85515	ACTZ_RAT	Actr1a	Alpha-centractin	0	TTGVVLDSGDGVTHAVPIYEGFAMPHSIMR	TTGVVLDSGDGVTHAVPIYEGFAMPHSIMR	4	TTGVVLDSGDGVTHAVPIYEGFAMPHSIMR4	139636	131113	182017
Q9QYU2	Q9QYU2	EFTS_RAT	Tsfm	Elongation factor Ts, mitochondrial	1	TTGYSFVNCK	TTGYSFVNC(UniMod:4)K	2	TTGYSFVNC(UniMod:4)K2	9423.77	9669.3	7386.3
Q6P7R8	Q6P7R8	DHB12_RAT	Hsd17b12	Very-long-chain 3-oxoacyl-CoA reductase	1	TTGYVIHAIMGSINSILPR	TTGYVIHAIMGSINSILPR	3	TTGYVIHAIMGSINSILPR3	7529	9646.36	6794.35
A0A8I6ANI3	A0A8I6ANI3	A0A8I6ANI3_RAT	Ctla2a	Cytotoxic T lymphocyte-associated protein 2 alpha	1	TTHDLPIPEDLGK	TTHDLPIPEDLGK	2	TTHDLPIPEDLGK2	19474.3	19789.6	13569.7
A0A8I6ANI3	A0A8I6ANI3	A0A8I6ANI3_RAT	Ctla2a	Cytotoxic T lymphocyte-associated protein 2 alpha	1	TTHDLPIPEDLGK	TTHDLPIPEDLGK	3	TTHDLPIPEDLGK3	899690	959785	883955
P05426	P05426;F1LUE9	RL7_RAT	Rpl7	Large ribosomal subunit protein uL30	0	TTHFVEGGDAGNREDQINR	TTHFVEGGDAGNREDQINR	3	TTHFVEGGDAGNREDQINR3	56669.2	17504.6	13435.9
P05426	P05426;F1LUE9	RL7_RAT	Rpl7	Large ribosomal subunit protein uL30	0	TTHFVEGGDAGNREDQINR	TTHFVEGGDAGNREDQINR	4	TTHFVEGGDAGNREDQINR4	316073	74551.6	77046.2
Q11205	Q11205	SIA4B_RAT	St3gal2	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2	1	TTHHFMYPESAK	TTHHFMYPESAK	2	TTHHFMYPESAK2	1033.92		
Q11205	Q11205	SIA4B_RAT	St3gal2	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2	1	TTHHFMYPESAK	TTHHFMYPESAK	3	TTHHFMYPESAK3	22665.9	10306.7	13087.3
A0A1W2Q5Z7	A0A1W2Q5Z7	A0A1W2Q5Z7_RAT	St3gal1	ST3 beta-galactoside alpha-2,3-sialyltransferase 1	1	TTHHLVYPESFR	TTHHLVYPESFR	2	TTHHLVYPESFR2		2094.96	4370.57
A0A1W2Q5Z7	A0A1W2Q5Z7	A0A1W2Q5Z7_RAT	St3gal1	ST3 beta-galactoside alpha-2,3-sialyltransferase 1	1	TTHHLVYPESFR	TTHHLVYPESFR	3	TTHHLVYPESFR3	31300.7	31826.3	30828
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	TTHLIAK	TTHLIAK	1	TTHLIAK1		4984.05	
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	TTHLIAK	TTHLIAK	2	TTHLIAK2		34667.5	
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	TTHLLFSLGAVCLDSR	TTHLLFSLGAVC(UniMod:4)LDSR	3	TTHLLFSLGAVC(UniMod:4)LDSR3	10825.8		13733.8
F1M8V2	F1M8V2	F1M8V2_RAT	Ube4b	Ubiquitin conjugation factor E4	1	TTHQDEEVFK	TTHQDEEVFK	3	TTHQDEEVFK3	4451.6		6018.7
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	TTHQLLFVR	TTHQLLFVR	2	TTHQLLFVR2	2797.02	5318.98	3859.49
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	TTHSSSTSWFR	TTHSSSTSWFR	2	TTHSSSTSWFR2	12863.2	7077.88	9895.67
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	TTHSSSTSWFR	TTHSSSTSWFR	3	TTHSSSTSWFR3	41626.1	42828.3	41529.8
Q32Q55	Q32Q55	Q32Q55_RAT	Ces2h	Carboxylic ester hydrolase	1	TTHTGQILGSLIHMK	TTHTGQILGSLIHMK	3	TTHTGQILGSLIHMK3	2994.52		8538.2
Q32Q55	Q32Q55	Q32Q55_RAT	Ces2h	Carboxylic ester hydrolase	1	TTHTGQILGSLIHMK	TTHTGQILGSLIHMK	4	TTHTGQILGSLIHMK4	807.787	3300.42	9309.62
B5DFD1	B5DFD1	B5DFD1_RAT	Nudcd1	NudC domain-containing protein 1	1	TTHVVNLGSNQYLFSVIVDPK	TTHVVNLGSNQYLFSVIVDPK	3	TTHVVNLGSNQYLFSVIVDPK3		3033.68	4666.48
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	TTIAQQVK	TTIAQQVK	2	TTIAQQVK2	97000.8	101002	110594
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	TTIDLTHEDNQYSIGNLK	TTIDLTHEDNQYSIGNLK	3	TTIDLTHEDNQYSIGNLK3	11224.8	9164.56	2262.72
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	TTIDLTHEDNQYSIGNLKPDTEYEVSLISR	TTIDLTHEDNQYSIGNLKPDTEYEVSLISR	4	TTIDLTHEDNQYSIGNLKPDTEYEVSLISR4	330462	461332	359371
F7EUU4	F7EUU4	F7EUU4_RAT	Cops5	COP9 signalosome subunit 5	1	TTIEAIHGLMSQVIK	TTIEAIHGLMSQVIK	2	TTIEAIHGLMSQVIK2	8965.88	12276	6797.35
F7EUU4	F7EUU4	F7EUU4_RAT	Cops5	COP9 signalosome subunit 5	1	TTIEAIHGLMSQVIK	TTIEAIHGLMSQVIK	3	TTIEAIHGLMSQVIK3	202399	201147	228265
G3V6U9	G3V6U9	SETD3_RAT	Setd3	Actin-histidine N-methyltransferase	1	TTIEEDKTVLK	TTIEEDKTVLK	3	TTIEEDKTVLK3	7344.7	10528.7	5289.92
G3V6U9	G3V6U9	SETD3_RAT	Setd3	Actin-histidine N-methyltransferase	1	TTIEEDKTVLKNPDLSVR	TTIEEDKTVLKNPDLSVR	4	TTIEEDKTVLKNPDLSVR4	4721.4	4141.24	6465.41
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	TTIELQVAEATK	TTIELQVAEATK	2	TTIELQVAEATK2	48982.9	46858.8	31707.2
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	TTIEPPPGK	TTIEPPPGK	2	TTIEPPPGK2	50052.5	55322	46325.3
A0A8I6AR22	A0A8I6AR22	A0A8I6AR22_RAT	Zdhhc20	Palmitoyltransferase	1	TTIESFR	TTIESFR	2	TTIESFR2	34657.8	56385.4	35808.5
P21670	P21670	PSA4_RAT	Psma4	Proteasome subunit alpha type-4	1	TTIFSPEGR	TTIFSPEGR	2	TTIFSPEGR2	2.88929e+06	2.63202e+06	2.76609e+06
P62870	P62870;A0A8I6GJ22;A0A8I5ZTT3	ELOB_RAT	Elob	Elongin-B	0	TTIFTDAK	TTIFTDAK	2	TTIFTDAK2	237222	284206	245777
D3ZNF4	D3ZNF4;A0A0G2JY80	D3ZNF4_RAT	Tbl1xr1	TBL1X receptor 1	0	TTIIWDAHTGEAK	TTIIWDAHTGEAK	3	TTIIWDAHTGEAK3	3764.4	1970.63	3731.49
P24062	P24062	IGF1R_RAT	Igf1r	Insulin-like growth factor 1 receptor	1	TTINNEYNYR	TTINNEYNYR	2	TTINNEYNYR2	1938.55		3258.12
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	TTINSEDSVR	TTINSEDSVR	2	TTINSEDSVR2	92229.1	100637	90174.5
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	TTIPHALLTWRPTSGEAAPPSPSAMSEK	TTIPHALLTWRPTSGEAAPPSPSAMSEK	4	TTIPHALLTWRPTSGEAAPPSPSAMSEK4	44270.6	48239.5	76452.2
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	TTIPHVLLTWR	TTIPHVLLTWR	3	TTIPHVLLTWR3	1808.25	3860.91	4633
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	TTIPHVLLTWRPAGMEEEVSDR	TTIPHVLLTWRPAGMEEEVSDR	4	TTIPHVLLTWRPAGMEEEVSDR4	633018	667104	576174
Q6VBQ5	Q6VBQ5	MYADM_RAT	Myadm	Myeloid-associated differentiation marker	1	TTITTTSSSSTTVGSAR	TTITTTSSSSTTVGSAR	2	TTITTTSSSSTTVGSAR2	115274	97781.1	69833.1
Q6VBQ5	Q6VBQ5	MYADM_RAT	Myadm	Myeloid-associated differentiation marker	1	TTITTTSSSSTTVGSAR	TTITTTSSSSTTVGSAR	3	TTITTTSSSSTTVGSAR3	25506.8	18932	16067.4
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	TTIVENVGSVEGLAYHR	TTIVENVGSVEGLAYHR	2	TTIVENVGSVEGLAYHR2	8570.12	9413.15	9259.13
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	TTIVENVGSVEGLAYHR	TTIVENVGSVEGLAYHR	3	TTIVENVGSVEGLAYHR3	134644	161355	137817
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	TTIVICCSPSSYNESETK	TTIVIC(UniMod:4)C(UniMod:4)SPSSYNESETK	3	TTIVIC(UniMod:4)C(UniMod:4)SPSSYNESETK3	21949.4	23072.4	22937.7
Q2M2S1	Q2M2S1	Q2M2S1_RAT	Tor1b	Torsin	1	TTLDFWR	TTLDFWR	2	TTLDFWR2	18524.4	18925	18600.8
Q641Z2	Q641Z2	PTN9_RAT	Ptpn9	Tyrosine-protein phosphatase non-receptor type 9	1	TTLEIHNTEER	TTLEIHNTEER	3	TTLEIHNTEER3	10862.2	11381.4	15397.4
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	TTLEMEFAK	TTLEMEFAK	2	TTLEMEFAK2	556448	558516	593685
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	TTLISDSK	TTLISDSK	2	TTLISDSK2	10798.3	14430	21339.7
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	TTLKEDDDKSGPIFIVVPNGK	TTLKEDDDKSGPIFIVVPNGK	4	TTLKEDDDKSGPIFIVVPNGK4	9528.25	9648.15	7389.5
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	TTLLAGDIEHPR	TTLLAGDIEHPR	2	TTLLAGDIEHPR2	40460.6	54186.6	30005.5
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	TTLLAGDIEHPR	TTLLAGDIEHPR	3	TTLLAGDIEHPR3	280215	378357	330493
Q99MB4	Q99MB4	ZNG1_RAT	Zng1	Zinc-regulated GTPase metalloprotein activator 1	1	TTLLNYILTEQHNR	TTLLNYILTEQHNR	3	TTLLNYILTEQHNR3	13845.8	14567	
Q68FT7	Q68FT7	Q68FT7_RAT	Farsb	Phenylalanine--tRNA ligase beta subunit	1	TTLLPGLLK	TTLLPGLLK	2	TTLLPGLLK2	15047.2	14531	10865.4
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	TTLLYFYQQLR	TTLLYFYQQLR	2	TTLLYFYQQLR2	14559.8	22026.2	17399.5
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	TTLLYFYQQLR	TTLLYFYQQLR	3	TTLLYFYQQLR3	3048.64	2570.26	
A0A8I5ZZZ6	A0A8I5ZZZ6	A0A8I5ZZZ6_RAT	Riok3	Serine/threonine-protein kinase RIO3	1	TTLNEFK	TTLNEFK	2	TTLNEFK2	83876.7	109767	83384.6
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	TTLPGVVDGANNPAIR	TTLPGVVDGANNPAIR	2	TTLPGVVDGANNPAIR2	17378.7	24387.9	23528.1
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	TTLPGVVDGANNPAIR	TTLPGVVDGANNPAIR	3	TTLPGVVDGANNPAIR3	38337.1	50249.1	55316.4
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	TTLPTFQSPEFSVTR	TTLPTFQSPEFSVTR	2	TTLPTFQSPEFSVTR2	84340.7	87079.5	74136.8
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	TTLPTFQSPEFSVTR	TTLPTFQSPEFSVTR	3	TTLPTFQSPEFSVTR3	11233.4	13447.7	13121.6
A0A8J8XL70	A0A8J8XL70	A0A8J8XL70_RAT	Serpinf1	Serpin family F member 1	1	TTLQDFHLDEDR	TTLQDFHLDEDR	2	TTLQDFHLDEDR2	4013.54	8642.99	
A0A8J8XL70	A0A8J8XL70	A0A8J8XL70_RAT	Serpinf1	Serpin family F member 1	1	TTLQDFHLDEDR	TTLQDFHLDEDR	3	TTLQDFHLDEDR3	225820	173331	192988
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	TTLQHWLSDVK	TTLQHWLSDVK	3	TTLQHWLSDVK3	16550.6	11406.8	16541.8
Q5I0K5	Q5I0K5	ABHDA_RAT	Abhd10	Palmitoyl-protein thioesterase ABHD10, mitochondrial	1	TTLSFLK	TTLSFLK	2	TTLSFLK2	16403.4	19081	17504.7
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	TTLSGAPCQR	TTLSGAPC(UniMod:4)QR	2	TTLSGAPC(UniMod:4)QR2	322919	336954	348353
P97544	P97544	PLPP3_RAT	Plpp3	Phospholipid phosphatase 3	1	TTLSLPAPAIR	TTLSLPAPAIR	2	TTLSLPAPAIR2	21290.5	25640.4	23935.3
Q66HG9	Q66HG9	MAVS_RAT	Mavs	Mitochondrial antiviral-signaling protein	1	TTLSSSSTGSAFAK	TTLSSSSTGSAFAK	2	TTLSSSSTGSAFAK2	82415	62025.5	56640.1
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	TTLTAAITK	TTLTAAITK	2	TTLTAAITK2	130835	117255	120323
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	TTLTGLRPGTEYGVGVSAVK	TTLTGLRPGTEYGVGVSAVK	3	TTLTGLRPGTEYGVGVSAVK3	2.55454e+06	2.9056e+06	2.81381e+06
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	TTLTLHHLSSGHLK	TTLTLHHLSSGHLK	3	TTLTLHHLSSGHLK3	17180.1	13446	10161.2
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	TTLTLHHLSSGHLK	TTLTLHHLSSGHLK	4	TTLTLHHLSSGHLK4	23368.6	28405.1	30147.9
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TTLTVFGIASLDLFEIGLEGK	TTLTVFGIASLDLFEIGLEGK	3	TTLTVFGIASLDLFEIGLEGK3		16600.3	34227.6
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	TTLVGIIK	TTLVGIIK	2	TTLVGIIK2	26214	36506.2	25906.6
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	TTLVIMER	TTLVIMER	2	TTLVIMER2	234297	242565	246185
D4AEL4	D4AEL4	D4AEL4_RAT	Abcb5	ATP binding cassette subfamily B member 5	1	TTLVVAHR	TTLVVAHR	2	TTLVVAHR2	14891.6	7147.81	10041.5
Q5CZZ9	Q5CZZ9	PI51B_RAT	Pip5k1b	Phosphatidylinositol 4-phosphate 5-kinase type-1 beta	1	TTLYSNSK	TTLYSNSK	2	TTLYSNSK2	9356.53	16285.8	11115.9
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	TTMETEQLLR	TTMETEQLLR	2	TTMETEQLLR2	46427.1	44873.7	40934.4
Q498D5	Q498D5	RMD2_RAT	Rmdn2	Regulator of microtubule dynamics protein 2	1	TTMIFPK	TTMIFPK	2	TTMIFPK2	6091.83	5758.46	9094.06
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	TTMILLCEDGSLR	TTMILLC(UniMod:4)EDGSLR	2	TTMILLC(UniMod:4)EDGSLR2	21286.7	23581.6	8525.81
A0A8I6AIV4	A0A8I6AIV4	A0A8I6AIV4_RAT	Dctn3l1	Dynactin 3-like 1	1	TTMLLSK	TTMLLSK	1	TTMLLSK1	2465.67	3041.32	2880.75
A0A8I6AIV4	A0A8I6AIV4	A0A8I6AIV4_RAT	Dctn3l1	Dynactin 3-like 1	1	TTMLLSK	TTMLLSK	2	TTMLLSK2	113313	114289	140448
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	TTMVLVNALYFK	TTMVLVNALYFK	2	TTMVLVNALYFK2	76268.7	68471.5	65113.1
O35763	O35763	MOES_RAT	Msn	Moesin	1	TTNDMIHAENMR	TTNDMIHAENMR	2	TTNDMIHAENMR2	6981.02	6161.13	6259.17
O35763	O35763	MOES_RAT	Msn	Moesin	1	TTNDMIHAENMR	TTNDMIHAENMR	3	TTNDMIHAENMR3	60241.7	73768.8	60003.9
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	TTNEGLLYPNPAAQMLVGDSFAR	TTNEGLLYPNPAAQMLVGDSFAR	3	TTNEGLLYPNPAAQMLVGDSFAR3	13460.8	9781.19	12132.8
Q2THW7	Q2THW6;Q2THW7	ZDHC5_RAT	Zdhhc5	Palmitoyltransferase ZDHHC5	0	TTNEQVTGK	TTNEQVTGK	2	TTNEQVTGK2			2855.83
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	TTNEVVLAVEFHPTDANTIITCGK	TTNEVVLAVEFHPTDANTIITC(UniMod:4)GK	3	TTNEVVLAVEFHPTDANTIITC(UniMod:4)GK3	23321.2	42241.4	24130.6
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	TTNFEGFLAK	TTNFEGFLAK	2	TTNFEGFLAK2		13658.6	
Q9JJ46	Q9JJ46	EBP_RAT	Ebp	3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase	1	TTNMLPLHPYWPR	TTNMLPLHPYWPR	3	TTNMLPLHPYWPR3	20823.8	30745.7	16598
A0A8I6G6W8	A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	TTNQQTVAAPTVK	TTNQQTVAAPTVK	2	TTNQQTVAAPTVK2	16711.2	16414.5	9497.9
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	TTNSSLEEIIDK	TTNSSLEEIIDK	2	TTNSSLEEIIDK2	12125	5862.65	13754.7
O55012	O55012	PICAL_RAT	Picalm	Phosphatidylinositol-binding clathrin assembly protein	1	TTNSSWVVVFK	TTNSSWVVVFK	2	TTNSSWVVVFK2	11871.9	7533.92	5088.14
D3Z9K9	D3Z9K9	D3Z9K9_RAT	Gdpd2	Glycerophosphodiester phosphodiesterase domain containing 2	1	TTNVASVFPER	TTNVASVFPER	2	TTNVASVFPER2	203909	226664	232889
A0A8I5ZU29	A0A8I5ZU29;A0A8L2UM24;B4F777	A0A8I5ZU29_RAT	LOC120097335	High mobility group nucleosome-binding domain-containing protein 5-like	0	TTNVVEESK	TTNVVEESK	2	TTNVVEESK2	27610.4	16314.7	23578.6
P62850	P62850;D3ZFZ8;A0A8I5Y191;D4ACJ1	RS24_RAT	Rps24	Small ribosomal subunit protein eS24	0	TTPDVIFVFGFR	TTPDVIFVFGFR	2	TTPDVIFVFGFR2	5843.51	11232.3	10074.9
B5DFI9	B5DFI9	B5DFI9_RAT	Pdk3	Protein-serine/threonine kinase	1	TTPEADDWSNPSSEPR	TTPEADDWSNPSSEPR	2	TTPEADDWSNPSSEPR2	20770.6	7460.18	12283.4
O88823	O88823	JTB_RAT	Jtb	Protein JTB	1	TTPECGSTGYVEK	TTPEC(UniMod:4)GSTGYVEK	2	TTPEC(UniMod:4)GSTGYVEK2	65564.9	66402.6	69152.9
P26431	P26431	SL9A1_RAT	Slc9a1	Sodium/hydrogen exchanger 1	1	TTPEEEEEDEDGVIMIR	TTPEEEEEDEDGVIMIR	3	TTPEEEEEDEDGVIMIR3	29786	24295.5	23365
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	TTPELDIVLQK	TTPELDIVLQK	2	TTPELDIVLQK2	31315.6	28938.6	19239.5
A0A8I5ZSU2	A0A8I5ZSU2	A0A8I5ZSU2_RAT	Ccm2l	CCM2 like scaffold protein	1	TTPEQDSILSLSAR	TTPEQDSILSLSAR	2	TTPEQDSILSLSAR2	15262.6	15911.7	25314.1
Q62871	Q62871	DC1I2_RAT	Dync1i2	Cytoplasmic dynein 1 intermediate chain 2	1	TTPEYVFHCQSAVMSATFAK	TTPEYVFHC(UniMod:4)QSAVMSATFAK	3	TTPEYVFHC(UniMod:4)QSAVMSATFAK3	65065.1	73756.5	89558.8
F1LTE0	F1LTE0	TANC2_RAT	Tanc2	Protein TANC2	1	TTPFMGIIDK	TTPFMGIIDK	2	TTPFMGIIDK2	4031.1	2467.53	2858.75
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	TTPFPSLK	TTPFPSLK	2	TTPFPSLK2	42502.2	31794.4	40923.1
F7F5Q9	F7F5Q9	F7F5Q9_RAT	Hcls1	Hematopoietic cell specific Lyn substrate 1	1	TTPIEAASSGAR	TTPIEAASSGAR	2	TTPIEAASSGAR2	415117	420983	344436
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	TTPLDLK	TTPLDLK	2	TTPLDLK2	23560.8	24204.3	29324
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	TTPLKPSSLPVIPDTIK	TTPLKPSSLPVIPDTIK	3	TTPLKPSSLPVIPDTIK3	2367.89	11179.2	7314.98
P17105	P17105	IP3KA_RAT	Itpka	Inositol-trisphosphate 3-kinase A	1	TTPLPDGQILDHR	TTPLPDGQILDHR	3	TTPLPDGQILDHR3	4677.81	2663.1	7523.68
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TTPPTAATPVR	TTPPTAATPVR	2	TTPPTAATPVR2	148315	125557	134802
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	TTPQSPDAQASR	TTPQSPDAQASR	2	TTPQSPDAQASR2	215135	185866	200718
Q9QZ81	Q9QZ81	AGO2_RAT	Ago2	Protein argonaute-2	1	TTPQTLSNLCLK	TTPQTLSNLC(UniMod:4)LK	2	TTPQTLSNLC(UniMod:4)LK2	4711.96	9780.47	
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	TTPSVVAFTPDGER	TTPSVVAFTPDGER	2	TTPSVVAFTPDGER2	268172	257006	275446
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	TTPSVVAFTPDGER	TTPSVVAFTPDGER	3	TTPSVVAFTPDGER3	9536.36	8031.03	6947.77
P14659	P0DMW0;P0DMW1;P55063;P14659;P63018;M0RCB1	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	0	TTPSYVAFTDTER	TTPSYVAFTDTER	2	TTPSYVAFTDTER2	3.01247e+06	2.86219e+06	2.99071e+06
P14659	P0DMW0;P0DMW1;P55063;P14659;P63018;M0RCB1	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	0	TTPSYVAFTDTER	TTPSYVAFTDTER	3	TTPSYVAFTDTER3	108074	90508.2	110955
O08679	O08679	MARK2_RAT	Mark2	Serine/threonine-protein kinase MARK2	1	TTPTPSTNSVLSTSTNR	TTPTPSTNSVLSTSTNR	2	TTPTPSTNSVLSTSTNR2	18702.7	21232.6	11911.1
P62025	P62025	PHAR2_RAT	Phactr2	Phosphatase and actin regulator 2	1	TTPYSSTGLGGSR	TTPYSSTGLGGSR	2	TTPYSSTGLGGSR2	30103.9	15531.9	20884.4
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	TTQAAAIIDHER	TTQAAAIIDHER	2	TTQAAAIIDHER2	2384.62	1950.15	
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	TTQAAAIIDHER	TTQAAAIIDHER	3	TTQAAAIIDHER3	26498.7	21459.8	30830.2
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	TTQEQLTK	TTQEQLTK	2	TTQEQLTK2	64083.2	73048.1	81975.2
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	TTQGLTALLLSLK	TTQGLTALLLSLK	2	TTQGLTALLLSLK2	26055.9	17010.1	24539.5
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	TTQGLTALLLSLK	TTQGLTALLLSLK	3	TTQGLTALLLSLK3	6557.81	3557.68	5591.56
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	TTQIGCLLR	TTQIGC(UniMod:4)LLR	2	TTQIGC(UniMod:4)LLR2	44185.2	50134.7	44905.5
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	TTQIYTYFVYK	TTQIYTYFVYK	2	TTQIYTYFVYK2	2516.69	3346.43	3692.27
Q6TUG0	Q6TUG0	DJB11_RAT	Dnajb11	DnaJ homolog subfamily B member 11	1	TTQLGPGR	TTQLGPGR	2	TTQLGPGR2	269821	163769	213678
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	TTQTMTVCQVK	TTQTMTVC(UniMod:4)QVK	2	TTQTMTVC(UniMod:4)QVK2	7293.3	7434.53	10211.4
Q32KJ6	Q32KJ6	GALNS_RAT	Galns	N-acetylgalactosamine-6-sulfatase	1	TTQVIQQHQK	TTQVIQQHQK	2	TTQVIQQHQK2	4676.81		10865.9
Q32KJ6	Q32KJ6	GALNS_RAT	Galns	N-acetylgalactosamine-6-sulfatase	1	TTQVIQQHQK	TTQVIQQHQK	3	TTQVIQQHQK3			5974.64
F1LR42	F1LR42	F1LR42_RAT	Rufy1	RUN and FYVE domain containing 1	1	TTQVMSSMK	TTQVMSSMK	2	TTQVMSSMK2	15511	15520.8	13091.1
B4F767	B4F767;F7FIK1	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	0	TTQWEDPR	TTQWEDPR	2	TTQWEDPR2	11702.1	13160.1	13420
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	TTRPTGVLLGVSSQK	TTRPTGVLLGVSSQK	3	TTRPTGVLLGVSSQK3	41585.4	49500.6	52400.4
B2RZD1	B2RZD1	B2RZD1_RAT	Sec61b	Protein transport protein Sec61 subunit beta	1	TTSAGTGGMWR	TTSAGTGGMWR	2	TTSAGTGGMWR2	113743	130478	135025
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	TTSCSNVSCWLK	TTSC(UniMod:4)SNVSC(UniMod:4)WLK	2	TTSC(UniMod:4)SNVSC(UniMod:4)WLK2		5130.03	6769.97
P18266	P18266	GSK3B_RAT	Gsk3b	Glycogen synthase kinase-3 beta	1	TTSFAESCKPVQQPSAFGSMK	TTSFAESC(UniMod:4)KPVQQPSAFGSMK	3	TTSFAESC(UniMod:4)KPVQQPSAFGSMK3	28672.3	29214	26221.6
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	TTSFNANLALK	TTSFNANLALK	2	TTSFNANLALK2	782321	599838	613025
Q02445	Q02445	TFPI1_RAT	Tfpi	Tissue factor pathway inhibitor	1	TTSGAEKPDFCFLEEDPGICR	TTSGAEKPDFC(UniMod:4)FLEEDPGIC(UniMod:4)R	3	TTSGAEKPDFC(UniMod:4)FLEEDPGIC(UniMod:4)R3	193001	213073	222055
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	TTSISPALAR	TTSISPALAR	2	TTSISPALAR2	50872.9	90306.9	99782.4
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	TTSKPSINPSEAPPSIVNEDFLQELK	TTSKPSINPSEAPPSIVNEDFLQELK	3	TTSKPSINPSEAPPSIVNEDFLQELK3	47146.5	51021	45962.8
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	TTSKPVQMMSMK	TTSKPVQMMSMK	3	TTSKPVQMMSMK3	78547.7	77089.9	94172.3
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	TTSLFPIK	TTSLFPIK	2	TTSLFPIK2	114416	125926	115774
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	TTSNTLHYIHIEQLDK	TTSNTLHYIHIEQLDK	4	TTSNTLHYIHIEQLDK4	6706.84	6886.32	7826.11
Q32PX2	Q32PX2	AIMP2_RAT	Aimp2	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2	1	TTSPATDAGHVQEPSEPSLR	TTSPATDAGHVQEPSEPSLR	3	TTSPATDAGHVQEPSEPSLR3	38419.3	32719.9	32141.6
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	TTSPEALETHGSFTWLGQTQYK	TTSPEALETHGSFTWLGQTQYK	3	TTSPEALETHGSFTWLGQTQYK3	7946.34	8531.54	
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	TTSQAAYEVAFLAHLPPLGLK	TTSQAAYEVAFLAHLPPLGLK	3	TTSQAAYEVAFLAHLPPLGLK3	17256.7	11619.2	10870.6
E9PT29	E9PT29	E9PT29_RAT	Ddx17	DEAD box helicase 17	1	TTSSANNPNLMYQDECDRR	TTSSANNPNLMYQDEC(UniMod:4)DRR	3	TTSSANNPNLMYQDEC(UniMod:4)DRR3	3407.85		
A0A8I5ZQQ3	A0A8I5ZQQ3	A0A8I5ZQQ3_RAT	Pdpr	Pyruvate dehydrogenase phosphatase regulatory subunit	1	TTSSAYSYTLER	TTSSAYSYTLER	2	TTSSAYSYTLER2	4764.01	5201.42	5795.4
Q8VHF0	Q8VHF0	MARK3_RAT	Mark3	MAP/microtubule affinity-regulating kinase 3	1	TTSSMDPSDMMR	TTSSMDPSDMMR	2	TTSSMDPSDMMR2	2691.77	3691.18	
O08679	O08679	MARK2_RAT	Mark2	Serine/threonine-protein kinase MARK2	1	TTSSMEPNEMMR	TTSSMEPNEMMR	2	TTSSMEPNEMMR2	14920.4	15955.5	20020.5
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	TTSSQHLVQYLATIAGTSGNK	TTSSQHLVQYLATIAGTSGNK	3	TTSSQHLVQYLATIAGTSGNK3	2687.85	8798.74	7684.52
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	TTSTTLQVR	TTSTTLQVR	2	TTSTTLQVR2	22122.7	21138.1	28056.3
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	TTTALTMFNAGIK	TTTALTMFNAGIK	2	TTTALTMFNAGIK2	61503.3	58977.9	72387.6
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	TTTAQDLVQHFK	TTTAQDLVQHFK	3	TTTAQDLVQHFK3	8870.08	9177.48	4925.36
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	TTTCISLQDAFDK	TTTC(UniMod:4)ISLQDAFDK	2	TTTC(UniMod:4)ISLQDAFDK2	9288.84	7448.76	10373.3
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	TTTDDFFKDVNTCCPQEAAVR	TTTDDFFKDVNTC(UniMod:4)C(UniMod:4)PQEAAVR	3	TTTDDFFKDVNTC(UniMod:4)C(UniMod:4)PQEAAVR3	14427.6	10235.4	16616.5
A0A8I6ACK9	A0A8I6ACK9	A0A8I6ACK9_RAT	Abcg3l3	ATP-binding cassette, subfamily G (WHITE), member 3-like 3	1	TTTDIIAVLR	TTTDIIAVLR	2	TTTDIIAVLR2	9409.8	13129.4	12068.1
P28073	P28073;A0A0G2JSL0	PSB6_RAT	Psmb6	Proteasome subunit beta type-6	0	TTTGSYIANR	TTTGSYIANR	2	TTTGSYIANR2	1.85662e+06	1.92585e+06	2.07414e+06
D4A5K6	D4A5K6	D4A5K6_RAT	Zmpste24	CAAX prenyl protease	1	TTTHVPPELEQIMDSDTFEK	TTTHVPPELEQIMDSDTFEK	3	TTTHVPPELEQIMDSDTFEK3	44635.4		61812.9
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	TTTIFLNGNR	TTTIFLNGNR	2	TTTIFLNGNR2	135222	174780	174738
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	TTTLATNIFFK	TTTLATNIFFK	2	TTTLATNIFFK2	73772.4	95225.8	76730.5
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	TTTPDVVHPK	TTTPDVVHPK	2	TTTPDVVHPK2	47221.9	29081.5	40690.7
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	TTTPLQTK	TTTPLQTK	2	TTTPLQTK2	50528.7	44050.7	49008.9
P80385	P80385	AAKG1_RAT	Prkag1	5'-AMP-activated protein kinase subunit gamma-1	1	TTTPVYVALGIFVQHR	TTTPVYVALGIFVQHR	3	TTTPVYVALGIFVQHR3	23169.3	15631.4	28009.1
Q64620	Q64620	PPP6_RAT	Ppp6c	Serine/threonine-protein phosphatase 6 catalytic subunit	1	TTTPYFL	TTTPYFL	1	TTTPYFL1	81488.7	75191.5	98340.9
D3ZUB7	D3ZUB7	D3ZUB7_RAT	Anapc4	Anaphase-promoting complex subunit 4	1	TTTTSVQDEFMHLLLWGK	TTTTSVQDEFMHLLLWGK	3	TTTTSVQDEFMHLLLWGK3		6403.14	4826.34
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	TTTTTTGLPVSSVSTALSHTHPSLTR	TTTTTTGLPVSSVSTALSHTHPSLTR	3	TTTTTTGLPVSSVSTALSHTHPSLTR3	40504.1	39950.4	48441
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	TTTTTTGLPVSSVSTALSHTHPSLTR	TTTTTTGLPVSSVSTALSHTHPSLTR	4	TTTTTTGLPVSSVSTALSHTHPSLTR4	274878	348864	329898
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	TTTVESSFVR	TTTVESSFVR	2	TTTVESSFVR2	79589	72316.8	82872.1
Q76GL9	Q76GL9	Q76GL9_RAT	Slc1a4	Amino acid transporter	1	TTTVVNVEGDALGAGILNHLNQR	TTTVVNVEGDALGAGILNHLNQR	3	TTTVVNVEGDALGAGILNHLNQR3	9922.96	6544.43	6281
B4F767	B4F767	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	1	TTTWERPLPPGWEK	TTTWERPLPPGWEK	3	TTTWERPLPPGWEK3	28882.5	21533.3	8197.97
B4F767	B4F767	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	1	TTTWQRPTAEYVR	TTTWQRPTAEYVR	3	TTTWQRPTAEYVR3	57800.7	53834.1	60485.2
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	TTTWQRPTLESVR	TTTWQRPTLESVR	3	TTTWQRPTLESVR3	100136	105264	95442.6
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	TTTWSKPTMQDDPR	TTTWSKPTMQDDPR	2	TTTWSKPTMQDDPR2	40532.9	44523.7	33728.7
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	TTTWSKPTMQDDPR	TTTWSKPTMQDDPR	3	TTTWSKPTMQDDPR3	235132	316724	266080
Q5RKI8	Q5RKI8	MITOS_RAT	Abcb8	Mitochondrial potassium channel ATP-binding subunit	1	TTVASLLER	TTVASLLER	2	TTVASLLER2	9797.16	6846.02	10121.3
Q4QQV8	Q4QQV8	CHMP5_RAT	Chmp5	Charged multivesicular body protein 5	1	TTVDAMK	TTVDAMK	2	TTVDAMK2	355207	389362	357188
A0A8J8YRV3	A0A8J8YRV3	A0A8J8YRV3_RAT	Drg1	Developmentally regulated GTP binding protein 1	1	TTVEDFCMK	TTVEDFC(UniMod:4)MK	2	TTVEDFC(UniMod:4)MK2	9138.51	3174.67	
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	TTVFDDCRK	TTVFDDC(UniMod:4)RK	2	TTVFDDC(UniMod:4)RK2	8084.67	6960.31	11592
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	TTVFDDCRK	TTVFDDC(UniMod:4)RK	3	TTVFDDC(UniMod:4)RK3	68613.6	68213.1	69881
P55053	A0A8I5ZZV4;P55053	FABP5_RAT	Fabp5	Fatty acid-binding protein 5	0	TTVFSCTLGEK	TTVFSC(UniMod:4)TLGEK	2	TTVFSC(UniMod:4)TLGEK2	66384.8	71480.1	62333.1
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	TTVGVDGSLYK	TTVGVDGSLYK	2	TTVGVDGSLYK2	71723.9	131775	105285
P18292	P18292	THRB_RAT	F2	Prothrombin	1	TTVKMTPR	TTVKMTPR	2	TTVKMTPR2	34719.6	59425.3	24377.3
P18292	P18292	THRB_RAT	F2	Prothrombin	1	TTVKMTPRSR	TTVKMTPRSR	3	TTVKMTPRSR3			15202.1
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	TTVLAMDQVPR	TTVLAMDQVPR	2	TTVLAMDQVPR2	163468	180240	157584
P83888	P83888;A0A8I6A5N2	TBG1_RAT	Tubg1	Tubulin gamma-1 chain	0	TTVLDVMR	TTVLDVMR	2	TTVLDVMR2	50140.9	48677.6	53147
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	TTVLYECCPGYMR	TTVLYEC(UniMod:4)C(UniMod:4)PGYMR	2	TTVLYEC(UniMod:4)C(UniMod:4)PGYMR2	33685.3	36130.7	27311
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	TTVNNGTVLPK	TTVNNGTVLPK	2	TTVNNGTVLPK2	39251.7	31815.3	45000.2
Q02445	Q02445	TFPI1_RAT	Tfpi	Tissue factor pathway inhibitor	1	TTVNNVVIPQATK	TTVNNVVIPQATK	2	TTVNNVVIPQATK2	7429.65	3297.46	3866.87
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	TTVPSGPPMTAILER	TTVPSGPPMTAILER	2	TTVPSGPPMTAILER2	38551	39606	29342.5
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	TTVQGSGGTASPHSQGQGSAGELMGPK	TTVQGSGGTASPHSQGQGSAGELMGPK	3	TTVQGSGGTASPHSQGQGSAGELMGPK3	54522.9	63922	64491.6
A0A8I6B124	A0A8I6B124	A0A8I6B124_RAT	Zswim8	Zinc finger, SWIM-type containing 8	1	TTVSEAEHPLLCEGTR	TTVSEAEHPLLC(UniMod:4)EGTR	3	TTVSEAEHPLLC(UniMod:4)EGTR3	10929.1	9021.68	5511.32
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TTVSNSLEK	TTVSNSLEK	1	TTVSNSLEK1	2735.69	1742.39	2844.8
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	TTVSNSLEK	TTVSNSLEK	2	TTVSNSLEK2	1.4664e+06	1.91341e+06	1.7966e+06
P23764	P23764	GPX3_RAT	Gpx3	Glutathione peroxidase 3	1	TTVSNVK	TTVSNVK	1	TTVSNVK1			612232
P23764	P23764	GPX3_RAT	Gpx3	Glutathione peroxidase 3	1	TTVSNVKMDILSYMR	TTVSNVKMDILSYMR	3	TTVSNVKMDILSYMR3	4617.03	9646.62	949.887
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	TTVVAAAAFLDAFQK	TTVVAAAAFLDAFQK	2	TTVVAAAAFLDAFQK2	19335.4	32097.8	37039.5
Q641X8	Q641X8;A0A0G2K273	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	0	TTVVAQLK	TTVVAQLK	2	TTVVAQLK2	100029	100814	111777
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	TTVVNDNGLSPVWAPTQEK	TTVVNDNGLSPVWAPTQEK	3	TTVVNDNGLSPVWAPTQEK3	21572.9	17340.2	17302.2
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	TTWDRPEPLPPGWER	TTWDRPEPLPPGWER	3	TTWDRPEPLPPGWER3	42552.8	32759.1	52123.8
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	TTWGILDPPVGNTR	TTWGILDPPVGNTR	2	TTWGILDPPVGNTR2	95024.5	110923	81796.4
A0A8I6AC05	A0A8I6AC05	A0A8I6AC05_RAT	ENSRNOG00000070455	Ig-like domain-containing protein	1	TTYAADFTGR	TTYAADFTGR	2	TTYAADFTGR2	10134.8	13936.6	13852
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	TTYDSSLSSYTVPLEK	TTYDSSLSSYTVPLEK	2	TTYDSSLSSYTVPLEK2	26497	21305.4	19671.3
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	TTYFEIFTAGAGIGEVEVVIQDPTGQK	TTYFEIFTAGAGIGEVEVVIQDPTGQK	3	TTYFEIFTAGAGIGEVEVVIQDPTGQK3	25298.7	50030.7	26369.8
P38918	P38918	ARK73_RAT	Akr7a3	Aflatoxin B1 aldehyde reductase member 3	1	TTYGPTAPSMISAAVR	TTYGPTAPSMISAAVR	2	TTYGPTAPSMISAAVR2	3983.91	3174.86	
Q8CG45	Q8CG45	ARK72_RAT	Akr7a2	Aflatoxin B1 aldehyde reductase member 2	1	TTYGTSAPSMTSAALR	TTYGTSAPSMTSAALR	2	TTYGTSAPSMTSAALR2	18751.1	12731.8	18975.5
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	TTYILQAVEGAWEGVDR	TTYILQAVEGAWEGVDR	2	TTYILQAVEGAWEGVDR2	3971.93	7085.81	9212.54
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	TTYILQAVEGAWEGVDR	TTYILQAVEGAWEGVDR	3	TTYILQAVEGAWEGVDR3	5793.22		3554.28
F1LNH3	F1LNH3	F1LNH3_RAT	Col6a2	Collagen type VI alpha 2 chain	1	TTYLNSFSHVGTGIVHAINNVVR	TTYLNSFSHVGTGIVHAINNVVR	4	TTYLNSFSHVGTGIVHAINNVVR4	1098.25	6871.84	5071.48
Q6AY63	Q6AY63	NUDT5_RAT	Nudt5	ADP-sugar pyrophosphatase	1	TTYMDPTGK	TTYMDPTGK	2	TTYMDPTGK2	20143.4	16066.6	19312.2
A0A8I5ZW56	A0A8I5ZW56	A0A8I5ZW56_RAT	Clec16a	C-type lectin domain containing 16A	1	TTYNHLLAER	TTYNHLLAER	3	TTYNHLLAER3	15280.5	5360.24	21839
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	TTYQALPCLPSMYSYPNR	TTYQALPC(UniMod:4)LPSMYSYPNR	3	TTYQALPC(UniMod:4)LPSMYSYPNR3	65449.5	74702.2	88386.8
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	TTYTEDGQTK	TTYTEDGQTK	2	TTYTEDGQTK2	13033.6		6821.86
D3ZJR7	D3ZJR7	D3ZJR7_RAT	Dsc2	Desmocollin 2	1	TTYVTSVEENTVNVELLR	TTYVTSVEENTVNVELLR	3	TTYVTSVEENTVNVELLR3	6620.1	4043.17	8791.61
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	TVAAELAIFR	TVAAELAIFR	2	TVAAELAIFR2	29341.9	28741.4	20359.5
A0A0G2K8Z9	D3ZM20;A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	0	TVAATNMNEESSR	TVAATNMNEESSR	2	TVAATNMNEESSR2	24701.6	29713.5	31749.5
O88658	O88658;F1M4A4;O35787	KIF1B_RAT	Kif1b	Kinesin-like protein KIF1B	0	TVAATNMNETSSR	TVAATNMNETSSR	2	TVAATNMNETSSR2	9023.4	12381.8	10996.3
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	TVAAVMTCR	TVAAVMTC(UniMod:4)R	2	TVAAVMTC(UniMod:4)R2	87995.4	75872.1	83751.3
G3V8G2	G3V8G2	G3V8G2_RAT	Psmd5	26S proteasome non-ATPase regulatory subunit 5	1	TVAEIFGNSNYLR	TVAEIFGNSNYLR	2	TVAEIFGNSNYLR2	28663.7	31620.9	33875.4
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	TVAELEAEK	TVAELEAEK	2	TVAELEAEK2	232926	215287	242145
P51111	P51111	HD_RAT	Htt	Huntingtin	1	TVAEPVSR	TVAEPVSR	2	TVAEPVSR2	133618	172618	169982
D3ZKX1	D3ZKX1	D3ZKX1_RAT	Washc3	WASH complex subunit 3	1	TVAFLNQFVVHTVQFLNR	TVAFLNQFVVHTVQFLNR	3	TVAFLNQFVVHTVQFLNR3			9018.64
P61515	A0A8I6ANA8;P61515;A0A8I5ZL35	RL37A_RAT	Rpl37a	Large ribosomal subunit protein eL43	0	TVAGGAWTYNTTSAVTVK	TVAGGAWTYNTTSAVTVK	2	TVAGGAWTYNTTSAVTVK2		2632.28	1973.51
F1LU27	F1LU27	F1LU27_RAT	Focad	Focadhesin	1	TVAGIPNFILK	TVAGIPNFILK	2	TVAGIPNFILK2	27484.1	27892.2	11472.4
A0A0G2K0W3	A0A0G2K0W3	A0A0G2K0W3_RAT	Ttyh3	Protein tweety homolog	1	TVAGVQDR	TVAGVQDR	2	TVAGVQDR2	408259	390135	21178.1
P15650	P15650	ACADL_RAT	Acadl	Long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	TVAHIQTVQHK	TVAHIQTVQHK	2	TVAHIQTVQHK2	11726.8	5703.81	5311.44
P15650	P15650	ACADL_RAT	Acadl	Long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	TVAHIQTVQHK	TVAHIQTVQHK	3	TVAHIQTVQHK3	36525.4	161027	147370
P14882	P14882	PCCA_RAT	Pcca	Propionyl-CoA carboxylase alpha chain, mitochondrial	1	TVAIHSDVDASSVHVK	TVAIHSDVDASSVHVK	3	TVAIHSDVDASSVHVK3	11276.4	8694.34	6019.86
P14882	P14882	PCCA_RAT	Pcca	Propionyl-CoA carboxylase alpha chain, mitochondrial	1	TVAIHSDVDASSVHVK	TVAIHSDVDASSVHVK	4	TVAIHSDVDASSVHVK4	11857.5	12766.3	20194.7
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	TVAIHTLWNIR	TVAIHTLWNIR	3	TVAIHTLWNIR3	10128	14571.4	20663.8
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	TVAILLK	TVAILLK	1	TVAILLK1	6254.69	6450.42	4895.84
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	TVAILLKDDYFVSGAGLPGR	TVAILLKDDYFVSGAGLPGR	3	TVAILLKDDYFVSGAGLPGR3	24558.9	31979.9	23144.3
Q04589	Q04589	FGFR1_RAT	Fgfr1	Fibroblast growth factor receptor 1	1	TVALGSNVEFMCK	TVALGSNVEFMC(UniMod:4)K	2	TVALGSNVEFMC(UniMod:4)K2	39468	37911.3	34176.7
F1LN92	F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	1	TVALLTEK	TVALLTEK	2	TVALLTEK2		22292.8	25260.5
Q71UF4	D4A250;Q71UF4;B5DFB2;A0A8I6ARR2	RBBP7_RAT	Rbbp7	Histone-binding protein RBBP7	0	TVALWDLR	TVALWDLR	2	TVALWDLR2	20901.4	22239.8	19214.3
O35217	O35217	MINP1_RAT	Minpp1	Multiple inositol polyphosphate phosphatase 1	1	TVALYEDLK	TVALYEDLK	2	TVALYEDLK2	107227	98783.5	81658.3
F1LU14	F1LU14	F1LU14_RAT	Snx32	Sorting nexin	1	TVAMHEIFLQR	TVAMHEIFLQR	3	TVAMHEIFLQR3	18861.5	16930.9	25790.5
A0A8I5ZS69	A0A8I5ZS69	A0A8I5ZS69_RAT	Snx6	Sorting nexin	1	TVAMHEVFLCR	TVAMHEVFLC(UniMod:4)R	2	TVAMHEVFLC(UniMod:4)R2	6719.03	3433.76	6776.3
A0A8I5ZS69	A0A8I5ZS69	A0A8I5ZS69_RAT	Snx6	Sorting nexin	1	TVAMHEVFLCR	TVAMHEVFLC(UniMod:4)R	3	TVAMHEVFLC(UniMod:4)R3	113455	98022.3	111937
Q6PEC4	Q6PEC4	SKP1_RAT	Skp1	S-phase kinase-associated protein 1	1	TVANMIK	TVANMIK	2	TVANMIK2	535633	478537	508526
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	TVAPALPR	TVAPALPR	2	TVAPALPR2	754246	712453	805557
F1LUU1	F1LUU1	F1LUU1_RAT	Itga11	Integrin subunit alpha 11	1	TVAPALQR	TVAPALQR	2	TVAPALQR2	21398.8	18595.5	11125.4
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	TVAQELLTLPSLVELR	TVAQELLTLPSLVELR	3	TVAQELLTLPSLVELR3	8271.18	4318.4	6778.83
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	TVAQQIHGTEIDMK	TVAQQIHGTEIDMK	2	TVAQQIHGTEIDMK2	12540.5	14393.1	7748.28
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	TVAQQIHGTEIDMK	TVAQQIHGTEIDMK	3	TVAQQIHGTEIDMK3	346247	380425	361551
A0A8I6GJC5	A0A8I6GJC5	A0A8I6GJC5_RAT	Reps1	RALBP1 associated Eps domain containing 1	1	TVASATTANEIR	TVASATTANEIR	2	TVASATTANEIR2	33013.9	26793	18164.4
A0A8I6GJC5	A0A8I6GJC5	A0A8I6GJC5_RAT	Reps1	RALBP1 associated Eps domain containing 1	1	TVASATTANEIRR	TVASATTANEIRR	3	TVASATTANEIRR3	23871.9	29181.3	35772.7
B2GUX8	B2GUX8	B2GUX8_RAT	Sh3bp5l	SH3 domain-binding protein 5	1	TVASDLQK	TVASDLQK	2	TVASDLQK2	15344.1	19546.1	22361.9
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	TVASVLLR	TVASVLLR	2	TVASVLLR2	75676.8	75301	74511.7
Q5PQL2	Q5PQL2	CNOT9_RAT	Cnot9	CCR4-NOT transcription complex subunit 9	1	TVATFILQK	TVATFILQK	2	TVATFILQK2	9098.92	4334.42	13861.4
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	TVATLSVLGTR	TVATLSVLGTR	2	TVATLSVLGTR2	15915	9817.3	15157.2
Q5XI72	Q5XI72	IF4H_RAT	Eif4h	Eukaryotic translation initiation factor 4H	1	TVATPLNQVANPNSAIFGGAR	TVATPLNQVANPNSAIFGGAR	3	TVATPLNQVANPNSAIFGGAR3	5641.39	7248.71	5380.24
Q5XI72	Q5XI72	IF4H_RAT	Eif4h	Eukaryotic translation initiation factor 4H	1	TVATPLNQVANPNSAIFGGARPR	TVATPLNQVANPNSAIFGGARPR	3	TVATPLNQVANPNSAIFGGARPR3	14972.8	16433.7	25564.5
B2RZB6	B2RZB6	B2RZB6_RAT	Lsm8	U6 snRNA-associated Sm-like protein LSm8	1	TVAVITSDGR	TVAVITSDGR	2	TVAVITSDGR2	7102.76	6960.48	27990.5
P52873	P52873	PYC_RAT	Pc	Pyruvate carboxylase, mitochondrial	1	TVAVYSEQDTGQMHR	TVAVYSEQDTGQMHR	3	TVAVYSEQDTGQMHR3	14781.3	3235.68	12104.9
F1LN92	F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	1	TVAYHEAGHAVAGWYLEHADPLLK	TVAYHEAGHAVAGWYLEHADPLLK	4	TVAYHEAGHAVAGWYLEHADPLLK4	4314.07	3890.88	11819.2
D3Z952	D3Z952	D3Z952_RAT	Mfap2	Microfibril associated protein 2	1	TVCAHEELLR	TVC(UniMod:4)AHEELLR	2	TVC(UniMod:4)AHEELLR2	11723.5	8818.18	7967.97
D3Z952	D3Z952	D3Z952_RAT	Mfap2	Microfibril associated protein 2	1	TVCAHEELLR	TVC(UniMod:4)AHEELLR	3	TVC(UniMod:4)AHEELLR3	145463	157886	166818
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	TVCDWETGHEPFNDPALR	TVC(UniMod:4)DWETGHEPFNDPALR	3	TVC(UniMod:4)DWETGHEPFNDPALR3	175808	176625	178185
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	TVCDWETGHEPFNDPALRGEK	TVC(UniMod:4)DWETGHEPFNDPALRGEK	4	TVC(UniMod:4)DWETGHEPFNDPALRGEK4	16864.9	24204.5	11238.2
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	TVCDWETGHEPFNDPALRGEKDPK	TVC(UniMod:4)DWETGHEPFNDPALRGEKDPK	4	TVC(UniMod:4)DWETGHEPFNDPALRGEKDPK4	15790.8	17672.1	17680.4
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	TVCFQNLR	TVC(UniMod:4)FQNLR	2	TVC(UniMod:4)FQNLR2	142362	129932	126165
F7FMS0	F7FMS0	F7FMS0_RAT	Mst1	Macrophage stimulating 1	1	TVCGPAGSQLVLLK	TVC(UniMod:4)GPAGSQLVLLK	2	TVC(UniMod:4)GPAGSQLVLLK2	24245.4	13273.2	19268.7
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	TVCGVVSK	TVC(UniMod:4)GVVSK	1	TVC(UniMod:4)GVVSK1	6564.53	3654.47	3772.29
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	TVCGVVSK	TVC(UniMod:4)GVVSK	2	TVC(UniMod:4)GVVSK2	427244	395707	347719
A0A8I6AT07	M0R4Q5;A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	0	TVCHVAVQWLEAAPK	TVC(UniMod:4)HVAVQWLEAAPK	2	TVC(UniMod:4)HVAVQWLEAAPK2	1772.01	2600.9	1806.09
A0A8I6AT07	M0R4Q5;A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	0	TVCHVAVQWLEAAPK	TVC(UniMod:4)HVAVQWLEAAPK	3	TVC(UniMod:4)HVAVQWLEAAPK3	5161.44	7014.83	5514.79
P97535	P97535	PLA1A_RAT	Pla1a	Phospholipase A1 member A	1	TVCIPEPVR	TVC(UniMod:4)IPEPVR	2	TVC(UniMod:4)IPEPVR2	203768	167478	155245
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	TVCLPSDPFPSGTECHISGWGVTETGEGSR	TVC(UniMod:4)LPSDPFPSGTEC(UniMod:4)HISGWGVTETGEGSR	4	TVC(UniMod:4)LPSDPFPSGTEC(UniMod:4)HISGWGVTETGEGSR4	223223	203532	253064
Q5XIA1	Q5XIA1	NCLN_RAT	Ncln	BOS complex subunit NCLN	1	TVDADVLSR	TVDADVLSR	2	TVDADVLSR2	112722	21261.6	140925
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	TVDAEEGPR	TVDAEEGPR	2	TVDAEEGPR2		96172.8	
Q5FVM7	Q5FVM7	DJC16_RAT	Dnajc16	DnaJ homolog subfamily C member 16	1	TVDEETVGSCDLDSSR	TVDEETVGSC(UniMod:4)DLDSSR	2	TVDEETVGSC(UniMod:4)DLDSSR2	8908.2	5500.4	6907.43
Q5XIG8	Q5XIG8	STRAP_RAT	Strap	Serine-threonine kinase receptor-associated protein	1	TVDFTQDSNYLLTGGQDK	TVDFTQDSNYLLTGGQDK	3	TVDFTQDSNYLLTGGQDK3	10548	11398.9	9925.91
A0A0G2JZP7	A0A0G2JZP7	A0A0G2JZP7_RAT	Spg11	SPG11 vesicle trafficking associated, spatacsin	1	TVDFVHQAER	TVDFVHQAER	3	TVDFVHQAER3		4758.51	5157.94
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	TVDGPAPLTR	TVDGPAPLTR	2	TVDGPAPLTR2	334476	336464	353978
A0A8I6AD02	F1M269;F1LUV3;M0R660;E9PTN6;D3ZME3;A0A0G2K8S2;D3ZGY4;D3ZWV2;E9PTV9;A0A8I6AD02;A0A8I5ZWK4;P04797;A0A8I6AAX6	A0A8I6AD02_RAT	ENSRNOG00000069655	Glyceraldehyde 3-phosphate dehydrogenase NAD(P) binding domain-containing protein	0	TVDGPSGK	TVDGPSGK	1	TVDGPSGK1			20338.5
A0A8I6AD02	F1M269;F1LUV3;M0R660;E9PTN6;D3ZME3;A0A0G2K8S2;D3ZGY4;D3ZWV2;E9PTV9;A0A8I6AD02;A0A8I5ZWK4;P04797;A0A8I6AAX6	A0A8I6AD02_RAT	ENSRNOG00000069655	Glyceraldehyde 3-phosphate dehydrogenase NAD(P) binding domain-containing protein	0	TVDGPSGK	TVDGPSGK	2	TVDGPSGK2			2.67868e+06
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	TVDIDDSQILPR	TVDIDDSQILPR	2	TVDIDDSQILPR2	9709.44	3149.52	5567.9
Q5PQM0	Q5PQM0	TM168_RAT	Tmem168	Transmembrane protein 168	1	TVDIEEADPPQLGDFTR	TVDIEEADPPQLGDFTR	2	TVDIEEADPPQLGDFTR2	20245.9	26518.9	24218.9
Q5PQM0	Q5PQM0	TM168_RAT	Tmem168	Transmembrane protein 168	1	TVDIEEADPPQLGDFTR	TVDIEEADPPQLGDFTR	3	TVDIEEADPPQLGDFTR3	13083.4	2503.73	11617.8
Q641Y2	Q641Y2	NDUS2_RAT	Ndufs2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	1	TVDIGVVSAEDALNYGFSGVMLR	TVDIGVVSAEDALNYGFSGVMLR	3	TVDIGVVSAEDALNYGFSGVMLR3		5272.85	
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	TVDLGLSSNIAVVHPSLGDSANK	TVDLGLSSNIAVVHPSLGDSANK	3	TVDLGLSSNIAVVHPSLGDSANK3	28276.8	12572.6	21430.1
F7EXX5	F7EXX5	F7EXX5_RAT	Irf3	Interferon regulatory factor 3	1	TVDLHISNSQPISLTSDQYK	TVDLHISNSQPISLTSDQYK	3	TVDLHISNSQPISLTSDQYK3	11502.7	12214.7	14304.6
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	TVDLKPDWGK	TVDLKPDWGK	2	TVDLKPDWGK2	21544.6	9767.51	13114
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	TVDLKPDWGK	TVDLKPDWGK	3	TVDLKPDWGK3	99833.1	75042.6	80452.6
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	TVDLLAGLGAERPETANTAQSPYK	TVDLLAGLGAERPETANTAQSPYK	3	TVDLLAGLGAERPETANTAQSPYK3	8916.37	10276.4	10323.7
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	TVDLQEELVCVQK	TVDLQEELVC(UniMod:4)VQK	2	TVDLQEELVC(UniMod:4)VQK2	17316.9	18165	18253.6
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	TVDLSSHLAK	TVDLSSHLAK	2	TVDLSSHLAK2	103802	100172	83975.6
P20069	P20069	MPPA_RAT	Pmpca	Mitochondrial-processing peptidase subunit alpha	1	TVDLVELER	TVDLVELER	2	TVDLVELER2	30228.6	40160.2	41679
P24368	P24368	PPIB_RAT	Ppib	Peptidyl-prolyl cis-trans isomerase B	1	TVDNFVALATGEK	TVDNFVALATGEK	2	TVDNFVALATGEK2	82090.8	59129.8	82649.5
P24368	P24368	PPIB_RAT	Ppib	Peptidyl-prolyl cis-trans isomerase B	1	TVDNFVALATGEK	TVDNFVALATGEK	3	TVDNFVALATGEK3	7806.18	15916.2	20363.9
Q66H86	Q66H86	OLFL1_RAT	Olfml1	Olfactomedin-like protein 1	1	TVDPEGSWMK	TVDPEGSWMK	2	TVDPEGSWMK2	73328.1	49499.9	72905.4
A0A8I6AAR9	A0A0G2K916;A0A8I6AAR9	A0A8I6AAR9_RAT	Ankrd17	Ankyrin repeat domain 17	0	TVDPETQAR	TVDPETQAR	2	TVDPETQAR2	22258.2	19004.2	31158.1
Q6AY64	Q6AY64	CF120_RAT		UPF0669 protein C6orf120 homolog	1	TVDQYPFGEAAYAADQTGTSQK	TVDQYPFGEAAYAADQTGTSQK	3	TVDQYPFGEAAYAADQTGTSQK3	16510.8	14891.7	13314.9
Q5RJK8	Q5RJK8	ACBD6_RAT	Acbd6	Acyl-CoA-binding domain-containing protein 6	1	TVDVNMTDEEGR	TVDVNMTDEEGR	2	TVDVNMTDEEGR2	3827.93	4607.02	8135.49
Q5XI78	Q5XI78;D3ZQD3	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	0	TVDWALAEYMAFGSLLK	TVDWALAEYMAFGSLLK	3	TVDWALAEYMAFGSLLK3	5152.73		1717.44
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	TVEACPVVR	TVEAC(UniMod:4)PVVR	2	TVEAC(UniMod:4)PVVR2	59642.7	61153.4	57909.3
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	TVEACPVVREEGDNCQVK	TVEAC(UniMod:4)PVVREEGDNC(UniMod:4)QVK	3	TVEAC(UniMod:4)PVVREEGDNC(UniMod:4)QVK3	18873.7	5242.79	17703
P41562	P41562	IDHC_RAT	Idh1	Isocitrate dehydrogenase [NADP] cytoplasmic	1	TVEAEAAHGTVTR	TVEAEAAHGTVTR	2	TVEAEAAHGTVTR2	2972.95	3703.41	3702.87
P41562	P41562	IDHC_RAT	Idh1	Isocitrate dehydrogenase [NADP] cytoplasmic	1	TVEAEAAHGTVTR	TVEAEAAHGTVTR	3	TVEAEAAHGTVTR3	43530.1	32549.7	34961.6
P16036	P16036	S25A3_RAT	Slc25a3	Solute carrier family 25 member 3	1	TVEALYK	TVEALYK	1	TVEALYK1	7087.87	10462.4	4849.05
P16036	P16036	S25A3_RAT	Slc25a3	Solute carrier family 25 member 3	1	TVEALYK	TVEALYK	2	TVEALYK2	691618	722021	647821
A1L1K3	A1L1K3	APC5_RAT	Anapc5	Anaphase-promoting complex subunit 5	1	TVEDADMDREDGER	TVEDADMDREDGER	3	TVEDADMDREDGER3	19507.6	20864.5	
D3ZUL1	D3ZUL1	D3ZUL1_RAT	Ccdc124	Coiled-coil domain containing 124	1	TVEDAIAVLSVAEEADRHPER	TVEDAIAVLSVAEEADRHPER	4	TVEDAIAVLSVAEEADRHPER4	10116.1	17641.7	12786
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	TVEDYQTLNK	TVEDYQTLNK	2	TVEDYQTLNK2	33557.5	45058	37283.5
Q1HAQ0	Q1HAQ0	PCAT1_RAT	Lpcat1	Lysophosphatidylcholine acyltransferase 1	1	TVEEIKR	TVEEIKR	2	TVEEIKR2	25450.8	30347.7	25371.1
Q6ZXC7	Q6ZXC7	Q6ZXC7_RAT	St8sia6	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6	1	TVEEIPLSHHYYDNK	TVEEIPLSHHYYDNK	3	TVEEIPLSHHYYDNK3	10613.1	13393.7	11886.9
Q6ZXC7	Q6ZXC7	Q6ZXC7_RAT	St8sia6	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6	1	TVEEIPLSHHYYDNK	TVEEIPLSHHYYDNK	4	TVEEIPLSHHYYDNK4	4149.03	10623.9	4423.86
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	TVEELFVNCK	TVEELFVNC(UniMod:4)K	2	TVEELFVNC(UniMod:4)K2	13179.4	12172.9	14157.1
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	TVEELLETGLIQVATR	TVEELLETGLIQVATR	3	TVEELLETGLIQVATR3	10944.1	9873.61	7411.42
Q9R010	Q9R010	CIB1_RAT	Cib1	Calcium and integrin-binding protein 1	1	TVEESLHTR	TVEESLHTR	2	TVEESLHTR2	29769.2	19537.1	26938.5
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	TVEETQVPEISGVAR	TVEETQVPEISGVAR	2	TVEETQVPEISGVAR2	16319.4	17737.7	17057
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	TVEEVLGHFGVNESTGLSLEQVK	TVEEVLGHFGVNESTGLSLEQVK	3	TVEEVLGHFGVNESTGLSLEQVK3	61707.8	75534.8	76471.3
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	TVEEVLGHFGVNESTGLSLEQVKK	TVEEVLGHFGVNESTGLSLEQVKK	3	TVEEVLGHFGVNESTGLSLEQVKK3	10955	19702.6	14323.3
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	TVEEVLGHFGVNESTGLSLEQVKK	TVEEVLGHFGVNESTGLSLEQVKK	4	TVEEVLGHFGVNESTGLSLEQVKK4	26501.2	49308.9	34137.9
P37377	P37377	SYUA_RAT	Snca	Alpha-synuclein	1	TVEGAGNIAAATGFVK	TVEGAGNIAAATGFVK	2	TVEGAGNIAAATGFVK2	2752.38	2578.2	2918.09
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	TVEGALK	TVEGALK	1	TVEGALK1	6640.04	3322.86	2353.98
P52303	P52303	AP1B1_RAT	Ap1b1	AP-1 complex subunit beta-1	1	TVEGQDMLYQSLK	TVEGQDMLYQSLK	2	TVEGQDMLYQSLK2	20438.4	17608.3	25848.1
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	TVEHGLDK	TVEHGLDK	2	TVEHGLDK2			29271.6
D3ZIF6	D3ZIF6	D3ZIF6_RAT	LOC100360095	Urinary protein 1-like	1	TVEHGSLIVSTNCCSATSFCNIVRP	TVEHGSLIVSTNC(UniMod:4)C(UniMod:4)SATSFC(UniMod:4)NIVRP	3	TVEHGSLIVSTNC(UniMod:4)C(UniMod:4)SATSFC(UniMod:4)NIVRP3	17384.3	18525.1	14709.5
P35286	P35286	RAB13_RAT	Rab13	Ras-related protein Rab-13	1	TVEIEGK	TVEIEGK	2	TVEIEGK2	35487.9	40887.8	34523.9
Q5U316	Q5U316;A0A0G2JTT4	RAB35_RAT	Rab35	Ras-related protein Rab-35	0	TVEINGEK	TVEINGEK	2	TVEINGEK2	127930	103672	124978
D4A3E2	D4A3E2	D4A3E2_RAT	Npepl1	Aminopeptidase-like 1	1	TVEINNTDAEGR	TVEINNTDAEGR	2	TVEINNTDAEGR2	21607.2	21331.2	29480.3
Q9Z1W6	Q9Z1W6	LYRIC_RAT	Mtdh	Protein LYRIC	1	TVEIPEDEVVR	TVEIPEDEVVR	2	TVEIPEDEVVR2	131473	125904	141296
P53812	P53812	PIPNB_RAT	Pitpnb	Phosphatidylinositol transfer protein beta isoform	1	TVEIVHIDIADR	TVEIVHIDIADR	3	TVEIVHIDIADR3	4529.68	5616.86	5288.47
P86182	P86182	CCD22_RAT	Ccdc22	Coiled-coil domain-containing protein 22	1	TVELLPDGAANLTK	TVELLPDGAANLTK	2	TVELLPDGAANLTK2	44338.4	32445	32845.3
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	TVELLSGVVDQTK	TVELLSGVVDQTK	2	TVELLSGVVDQTK2	131100	144634	146913
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	TVELLSGVVDQTK	TVELLSGVVDQTK	3	TVELLSGVVDQTK3	18824.2	15060.9	13697.4
P35281	P35281	RAB10_RAT	Rab10	Ras-related protein Rab-10	1	TVELQGK	TVELQGK	1	TVELQGK1	3005.18	2654.11	3885.35
P35281	P35281	RAB10_RAT	Rab10	Ras-related protein Rab-10	1	TVELQGK	TVELQGK	2	TVELQGK2	748298	684310	839751
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	TVELSVPADPANLDSEAK	TVELSVPADPANLDSEAK	2	TVELSVPADPANLDSEAK2	10695.1	12854.8	7555.42
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	TVEMYPAYTEEELK	TVEMYPAYTEEELK	2	TVEMYPAYTEEELK2	111560	123283	112481
Q6AYQ9	Q6AYQ9	Q6AYQ9_RAT	Ppic	Peptidyl-prolyl cis-trans isomerase	1	TVENFVTLATGEK	TVENFVTLATGEK	2	TVENFVTLATGEK2	162869	145322	170772
Q6AYQ9	Q6AYQ9	Q6AYQ9_RAT	Ppic	Peptidyl-prolyl cis-trans isomerase	1	TVENFVTLATGEK	TVENFVTLATGEK	3	TVENFVTLATGEK3	3210.23	2423.56	2063.89
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TVENIKDPLFR	TVENIKDPLFR	2	TVENIKDPLFR2	24229.7	16907	14278.2
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TVENIKDPLFR	TVENIKDPLFR	3	TVENIKDPLFR3	442712	496331	467694
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	TVENLEK	TVENLEK	1	TVENLEK1	2647.19	4425.61	3987.21
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	TVENLEK	TVENLEK	2	TVENLEK2	268809	389269	535675
Q3MIE4	Q3MIE4	VAT1_RAT	Vat1	Synaptic vesicle membrane protein VAT-1 homolog	1	TVENVTVFGTASASK	TVENVTVFGTASASK	2	TVENVTVFGTASASK2	36056	39170.1	41891.3
A0A8I6AHX5	A0A8I6AHX5	A0A8I6AHX5_RAT	Aven	Apoptosis and caspase activation inhibitor	1	TVEPGQPSTSK	TVEPGQPSTSK	2	TVEPGQPSTSK2	18697.6	11304.2	
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	TVEQNVLQQSAAQK	TVEQNVLQQSAAQK	2	TVEQNVLQQSAAQK2	3612.75	1623.45	3499.2
Q32Q07	Q32Q07	LRRN1_RAT	Lrrn1	Leucine-rich repeat neuronal protein 1	1	TVESLPNLR	TVESLPNLR	2	TVESLPNLR2	27389.8	27419	24532.9
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	TVETLLLR	TVETLLLR	2	TVETLLLR2	74585	65560.7	55905.6
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	TVEVLEPEVTK	TVEVLEPEVTK	2	TVEVLEPEVTK2	312686	369677	331645
A0A8I6A1H4	A0A8I6A1H4	A0A8I6A1H4_RAT	Tmppe	Transmembrane protein with metallophosphoesterase domain	1	TVEVPIHQLPPSMNNLK	TVEVPIHQLPPSMNNLK	3	TVEVPIHQLPPSMNNLK3	4953.8	9217.07	8962.74
B5DF24	B5DF24	B5DF24_RAT	Uck1	Uridine-cytidine kinase	1	TVEVPTYDFVTHSR	TVEVPTYDFVTHSR	3	TVEVPTYDFVTHSR3	12171.5		13361
Q9Z244	Q9Z244	GMPR1_RAT	Gmpr	GMP reductase 1	1	TVEVPYK	TVEVPYK	1	TVEVPYK1	9134.18	5747.94	6434.91
Q9Z244	Q9Z244	GMPR1_RAT	Gmpr	GMP reductase 1	1	TVEVPYK	TVEVPYK	2	TVEVPYK2	316669	305335	331739
Q5BK26	M0R715;Q5BK26	PLPL7_RAT	Pnpla7	Patatin-like phospholipase domain-containing protein 7	0	TVEWLNMR	TVEWLNMR	2	TVEWLNMR2	13143.7	25212.8	24244.6
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	TVEYAPCR	TVEYAPC(UniMod:4)R	2	TVEYAPC(UniMod:4)R2	627599	643307	675085
D3Z8E0	D3Z8E0	D3Z8E0_RAT	Rps6ka3	Ribosomal protein S6 kinase	1	TVEYLHTQGVVHR	TVEYLHTQGVVHR	4	TVEYLHTQGVVHR4		1009.62	3206.31
P21531	P21531	RL3_RAT	Rpl3	Large ribosomal subunit protein uL3	1	TVFAEHISDECK	TVFAEHISDEC(UniMod:4)K	2	TVFAEHISDEC(UniMod:4)K2	817.521	1757.73	
P21531	P21531	RL3_RAT	Rpl3	Large ribosomal subunit protein uL3	1	TVFAEHISDECK	TVFAEHISDEC(UniMod:4)K	3	TVFAEHISDEC(UniMod:4)K3	34540.9	31800.6	30926.8
P21531	P21531	RL3_RAT	Rpl3	Large ribosomal subunit protein uL3	1	TVFAEHISDECKR	TVFAEHISDEC(UniMod:4)KR	3	TVFAEHISDEC(UniMod:4)KR3	14500.4	7412.7	11329.6
P21531	P21531	RL3_RAT	Rpl3	Large ribosomal subunit protein uL3	1	TVFAEHISDECKR	TVFAEHISDEC(UniMod:4)KR	4	TVFAEHISDEC(UniMod:4)KR4	3924.4	4122.77	10736.5
Q6RUV5	A0A8I6A1P8;M0R5T4;Q6RUV5	RAC1_RAT	Rac1	Ras-related C3 botulinum toxin substrate 1	0	TVFDEAIR	TVFDEAIR	1	TVFDEAIR1	5982.32	4679.2	1799.63
Q6RUV5	A0A8I6A1P8;M0R5T4;Q6RUV5	RAC1_RAT	Rac1	Ras-related C3 botulinum toxin substrate 1	0	TVFDEAIR	TVFDEAIR	2	TVFDEAIR2	3.04473e+06	2.88802e+06	3.33812e+06
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	TVFEALQAPACHENLVK	TVFEALQAPAC(UniMod:4)HENLVK	2	TVFEALQAPAC(UniMod:4)HENLVK2	6414.36	4590.35	4472.73
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	TVFEALQAPACHENLVK	TVFEALQAPAC(UniMod:4)HENLVK	3	TVFEALQAPAC(UniMod:4)HENLVK3	39231.1	31276.5	32328
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	TVFEALQAPACHENMVK	TVFEALQAPAC(UniMod:4)HENMVK	2	TVFEALQAPAC(UniMod:4)HENMVK2	3121.12	5593.61	4793.31
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	TVFEALQAPACHENMVK	TVFEALQAPAC(UniMod:4)HENMVK	3	TVFEALQAPAC(UniMod:4)HENMVK3	34659.9	41459.5	34671.4
P10252	P10252	CD48_RAT	Cd48	CD48 antigen	1	TVFESVFK	TVFESVFK	1	TVFESVFK1	4870.87	8020.21	6597.43
P10252	P10252	CD48_RAT	Cd48	CD48 antigen	1	TVFESVFK	TVFESVFK	2	TVFESVFK2	1.48926e+06	1.34167e+06	1.47233e+06
P10252	P10252	CD48_RAT	Cd48	CD48 antigen	1	TVFESVFKDR	TVFESVFKDR	3	TVFESVFKDR3	49164.5	76597.1	77891.2
P13941	P13941	CO3A1_RAT	Col3a1	Collagen alpha-1(III) chain	1	TVFEYQTR	TVFEYQTR	2	TVFEYQTR2	27862.7	33907.2	24779
Q9QZL2	Q9QZL2	CHST3_RAT	Chst3	Carbohydrate sulfotransferase 3	1	TVFFQQGGASAAGSALVYR	TVFFQQGGASAAGSALVYR	2	TVFFQQGGASAAGSALVYR2	7745.26	4672.46	4652.76
P38718	P38718	MPC2_RAT	Mpc2	Mitochondrial pyruvate carrier 2	1	TVFFWAPIMK	TVFFWAPIMK	2	TVFFWAPIMK2	76626.9	77704.3	93541.3
F7F0H6	F7F0H6	F7F0H6_RAT	Ifgga2l1	Similar to interferon-inducible GTPase	1	TVFGVDDAALQSLAK	TVFGVDDAALQSLAK	2	TVFGVDDAALQSLAK2	5462.04	12650.4	7557.33
Q6Q0N1	Q6Q0N1	CNDP2_RAT	Cndp2	Cytosolic non-specific dipeptidase	1	TVFGVEPDLTR	TVFGVEPDLTR	2	TVFGVEPDLTR2	31170.3	25006.7	26822.5
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	TVFLVAEDK	TVFLVAEDK	2	TVFLVAEDK2	7266.36	17203.3	13348.8
F7EYC4	F7EYC4	F7EYC4_RAT	Tom1	Target of myb1 membrane trafficking protein	1	TVFNSETPSR	TVFNSETPSR	2	TVFNSETPSR2	35054.9	30331.2	35544
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	TVFPDAIIIR	TVFPDAIIIR	2	TVFPDAIIIR2	14631	15513.3	16512.9
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	TVFPDAIIIRPSDMFGR	TVFPDAIIIRPSDMFGR	3	TVFPDAIIIRPSDMFGR3	85585	92925.2	84772.3
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	TVFPDAIIIRPSDMFGREDR	TVFPDAIIIRPSDMFGREDR	3	TVFPDAIIIRPSDMFGREDR3		11277.2	5588.59
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	TVFPDAIIIRPSDMFGREDR	TVFPDAIIIRPSDMFGREDR	4	TVFPDAIIIRPSDMFGREDR4	5733.53	11464.7	12266
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	TVFQFDVQR	TVFQFDVQR	2	TVFQFDVQR2	42188.7	45647.9	30341.3
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	TVFSGSVSIPSITK	TVFSGSVSIPSITK	2	TVFSGSVSIPSITK2	25909.4	26603.3	23659.1
Q5U2N0	Q5U2N0	PYRG2_RAT	Ctps2	CTP synthase 2	1	TVFTTENSILK	TVFTTENSILK	2	TVFTTENSILK2	7607.21	11493.2	8440.56
Q5U2N0	Q5U2N0	PYRG2_RAT	Ctps2	CTP synthase 2	1	TVFTTENSILKK	TVFTTENSILKK	3	TVFTTENSILKK3	6940.34	10171.9	1977.36
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	TVFVEYMDR	TVFVEYMDR	2	TVFVEYMDR2	138001	150464	139590
A0A8I5ZV31	A0A8I5ZV31	A0A8I5ZV31_RAT	Atp11c	Phospholipid-transporting ATPase	1	TVFVGNHPISGTEAYIAQR	TVFVGNHPISGTEAYIAQR	3	TVFVGNHPISGTEAYIAQR3	12033.8	14641	8197.11
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	TVFYYYGSDK	TVFYYYGSDK	2	TVFYYYGSDK2	31906	33195.6	52533.3
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	TVFYYYGSDKDK	TVFYYYGSDKDK	2	TVFYYYGSDKDK2	215821	200361	192805
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	TVFYYYGSDKDK	TVFYYYGSDKDK	3	TVFYYYGSDKDK3	1.21181e+06	1.33112e+06	1.41117e+06
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	TVGATALPK	TVGATALPK	1	TVGATALPK1	5611.12		7935.67
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	TVGATALPK	TVGATALPK	2	TVGATALPK2	643726	656419	685144
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	TVGEEQKPEEPK	TVGEEQKPEEPK	2	TVGEEQKPEEPK2	2313.38	3159.36	2008.12
P29411	P29411	KAD3_RAT	Ak3	GTP:AMP phosphotransferase AK3, mitochondrial	1	TVGIDDLTGEPLIQREDDKPETVIK	TVGIDDLTGEPLIQREDDKPETVIK	4	TVGIDDLTGEPLIQREDDKPETVIK4	15933.1	20622.2	25456.3
P08649	P08649	CO4_RAT	C4	Complement C4	1	TVGIPMPTFSHYYYMIISR	TVGIPMPTFSHYYYMIISR	3	TVGIPMPTFSHYYYMIISR3	2.24813e+07	2.3006e+07	2.01989e+07
P08649	P08649	CO4_RAT	C4	Complement C4	1	TVGIPMPTFSHYYYMIISR	TVGIPMPTFSHYYYMIISR	4	TVGIPMPTFSHYYYMIISR4	2037.6	2648.82	6038.71
P08649	P08649	CO4_RAT	C4	Complement C4	1	TVGIPMPTFSHYYYMIISRGQIMAMSR	TVGIPMPTFSHYYYMIISRGQIMAMSR	4	TVGIPMPTFSHYYYMIISRGQIMAMSR4	189205	186204	164860
P08649	P08649	CO4_RAT	C4	Complement C4	1	TVGIPMPTFSHYYYMIISRGQIMAMSREPR	TVGIPMPTFSHYYYMIISRGQIMAMSREPR	4	TVGIPMPTFSHYYYMIISRGQIMAMSREPR4	42133.3	45469.8	40211.8
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	TVGIPVPTFSHYYYMIISR	TVGIPVPTFSHYYYMIISR	3	TVGIPVPTFSHYYYMIISR3	4.33709e+06	4.47471e+06	3.64569e+06
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	TVGLFLQGGK	TVGLFLQGGK	2	TVGLFLQGGK2	250925	243630	261217
Q6P7R8	Q6P7R8	DHB12_RAT	Hsd17b12	Very-long-chain 3-oxoacyl-CoA reductase	1	TVGLQTR	TVGLQTR	2	TVGLQTR2	458929	418968	427739
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	TVGMLSNMISFYDMAR	TVGMLSNMISFYDMAR	2	TVGMLSNMISFYDMAR2	7678.07	3023.49	4956
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	TVGMLSNMISFYDMAR	TVGMLSNMISFYDMAR	3	TVGMLSNMISFYDMAR3	3249.71	1111.13	2298.61
Q5XI74	Q5XI74	EEPD1_RAT	Eepd1	Endonuclease/exonuclease/phosphatase family domain-containing protein 1	1	TVGPSPFLAR	TVGPSPFLAR	2	TVGPSPFLAR2	3698.48		
Q6AY78	Q6AY78	S22AI_RAT	Slc22a18	Solute carrier family 22 member 18	1	TVGPTLGGLLYR	TVGPTLGGLLYR	2	TVGPTLGGLLYR2	6019.47	4068.18	7392.29
Q62812	F1LNF0;Q63862;Q62812	MYH9_RAT	Myh9	Myosin-9	0	TVGQLYK	TVGQLYK	1	TVGQLYK1	333688	312690	252084
Q62812	F1LNF0;Q63862;Q62812	MYH9_RAT	Myh9	Myosin-9	0	TVGQLYK	TVGQLYK	2	TVGQLYK2	241098	278733	256874
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	TVGQLYKEQLAK	TVGQLYKEQLAK	2	TVGQLYKEQLAK2	4859.46		
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	TVGQLYKEQLAK	TVGQLYKEQLAK	3	TVGQLYKEQLAK3	19297.1	97819	118932
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	TVGRALYSQAR	TVGRALYSQAR	3	TVGRALYSQAR3	31250.9	55406.7	64545
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	TVGSNIQVQK	TVGSNIQVQK	2	TVGSNIQVQK2	145165	138058	146341
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	TVGTPGQDNPGVSLHPLSVDSLDSR	TVGTPGQDNPGVSLHPLSVDSLDSR	3	TVGTPGQDNPGVSLHPLSVDSLDSR3	8333.79	17942.4	
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	TVGTPIASVPGSTNTGTVPGPEK	TVGTPIASVPGSTNTGTVPGPEK	3	TVGTPIASVPGSTNTGTVPGPEK3	63596.4	75825.1	78383.9
D3ZEI0	D3ZEI0	D3ZEI0_RAT	AABR07016623.1	60S ribosomal protein L28	1	TVGVEPAADGK	TVGVEPAADGK	2	TVGVEPAADGK2	41218.3	58608.3	47715.2
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	TVGVWSPSPPTCER	TVGVWSPSPPTC(UniMod:4)ER	2	TVGVWSPSPPTC(UniMod:4)ER2	2.16424e+07	2.15545e+07	2.30973e+07
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	TVGVWSPSPPTCER	TVGVWSPSPPTC(UniMod:4)ER	3	TVGVWSPSPPTC(UniMod:4)ER3	312063	254213	230338
F7F1X7	F7F1X7	F7F1X7_RAT	Pmm2	Phosphomannomutase	1	TVGYTVTAPEDTR	TVGYTVTAPEDTR	2	TVGYTVTAPEDTR2	5854.82	5403.87	4845.98
F7F1X7	F7F1X7	F7F1X7_RAT	Pmm2	Phosphomannomutase	1	TVGYTVTAPEDTRR	TVGYTVTAPEDTRR	3	TVGYTVTAPEDTRR3	33002.2	32172.7	39570.9
D3ZPF2	D3ZPF2	D3ZPF2_RAT	Mcat	Malonyl-CoA-acyl carrier protein transacylase	1	TVHCQPAVFVASLAAVEK	TVHC(UniMod:4)QPAVFVASLAAVEK	3	TVHC(UniMod:4)QPAVFVASLAAVEK3	3042.83	2199.44	
Q8R508	Q8R508	FAT3_RAT	Fat3	Protocadherin Fat 3	1	TVHIANPR	TVHIANPR	2	TVHIANPR2			2945.82
Q2KMM2	Q2KMM2	TPPC1_RAT	Trappc1	Trafficking protein particle complex subunit 1	1	TVHNLYLFDR	TVHNLYLFDR	2	TVHNLYLFDR2	14761.4	15460.8	17502.3
Q2KMM2	Q2KMM2	TPPC1_RAT	Trappc1	Trafficking protein particle complex subunit 1	1	TVHNLYLFDR	TVHNLYLFDR	3	TVHNLYLFDR3	81058.5	79095.8	65681.6
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	TVHSGSLMLVTVELK	TVHSGSLMLVTVELK	2	TVHSGSLMLVTVELK2	2720.06	4275.27	3381.41
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	TVHSGSLMLVTVELK	TVHSGSLMLVTVELK	3	TVHSGSLMLVTVELK3	43121	66789.6	39610.2
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	TVHSLACLLTQYR	TVHSLAC(UniMod:4)LLTQYR	3	TVHSLAC(UniMod:4)LLTQYR3	38568.9	40048.5	44215.8
Q10473	Q10473	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	1	TVHSVINR	TVHSVINR	2	TVHSVINR2	31280.9	28321.8	25989.5
Q925R7	Q925R7	GLT10_RAT	Galnt10	Polypeptide N-acetylgalactosaminyltransferase 10	1	TVHSVLNR	TVHSVLNR	2	TVHSVLNR2	31280.9	28321.8	25989.5
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	TVHTEWTQR	TVHTEWTQR	2	TVHTEWTQR2	69362.5	64766.4	50666.9
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	TVHTEWTQR	TVHTEWTQR	3	TVHTEWTQR3	85199.1	96756.7	122973
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	TVHWGTPTAFQK	TVHWGTPTAFQK	2	TVHWGTPTAFQK2	37717.5	27085.3	30464.7
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	TVHWGTPTAFQK	TVHWGTPTAFQK	3	TVHWGTPTAFQK3	89964.9	91071.2	70440.5
D4A416	D4A416	D4A416_RAT	Clptm1l	CLPTM1-like	1	TVHYLPILFIDQLSNR	TVHYLPILFIDQLSNR	2	TVHYLPILFIDQLSNR2	9777.34	6698.23	13166.4
D4A416	D4A416	D4A416_RAT	Clptm1l	CLPTM1-like	1	TVHYLPILFIDQLSNR	TVHYLPILFIDQLSNR	3	TVHYLPILFIDQLSNR3	5869.16	4521.59	
E9PU03	E9PU03	E9PU03_RAT	Smg5	Nonsense-mediated mRNA decay factor	1	TVIDGLDLLK	TVIDGLDLLK	2	TVIDGLDLLK2			10711.3
E9PU03	E9PU03	E9PU03_RAT	Smg5	Nonsense-mediated mRNA decay factor	1	TVIDGLDLLKK	TVIDGLDLLKK	3	TVIDGLDLLKK3	1516.15	3494.98	5094.06
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	TVIDMNGIEVK	TVIDMNGIEVK	2	TVIDMNGIEVK2	26472.2	25101.9	25234.6
Q6AY25	Q6AY25	TMED3_RAT	Tmed3	Transmembrane emp24 domain-containing protein 3	1	TVIDSQTHYR	TVIDSQTHYR	2	TVIDSQTHYR2	9403.86	11513.3	5415.31
Q6AY25	Q6AY25	TMED3_RAT	Tmed3	Transmembrane emp24 domain-containing protein 3	1	TVIDSQTHYR	TVIDSQTHYR	3	TVIDSQTHYR3	30646.1	24959	32415.5
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	TVIDYNGER	TVIDYNGER	2	TVIDYNGER2	1.62356e+06	1.79853e+06	1.77769e+06
P20909	P20909	COBA1_RAT	Col11a1	Collagen alpha-1(XI) chain	1	TVIEINTPK	TVIEINTPK	2	TVIEINTPK2	25638.4	16210.4	16025.2
P11505	P11505	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	1	TVIEPMASEGLR	TVIEPMASEGLR	2	TVIEPMASEGLR2	54110.2	50860.1	43735.9
Q5PPL3	Q5PPL3	NSDHL_RAT	Nsdhl	Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating	1	TVIETCK	TVIETC(UniMod:4)K	2	TVIETC(UniMod:4)K2	51096.4	60345.1	36440.5
Q64640	Q64640	ADK_RAT	Adk	Adenosine kinase	1	TVIFTQGR	TVIFTQGR	2	TVIFTQGR2	17723.7		
P18421	P18421	PSB1_RAT	Psmb1	Proteasome subunit beta type-1	1	TVIGCSGFHGDCLTLTK	TVIGC(UniMod:4)SGFHGDC(UniMod:4)LTLTK	2	TVIGC(UniMod:4)SGFHGDC(UniMod:4)LTLTK2	185237	162276	191689
P18421	P18421	PSB1_RAT	Psmb1	Proteasome subunit beta type-1	1	TVIGCSGFHGDCLTLTK	TVIGC(UniMod:4)SGFHGDC(UniMod:4)LTLTK	3	TVIGC(UniMod:4)SGFHGDC(UniMod:4)LTLTK3	4.82834e+06	5.29543e+06	5.63314e+06
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	TVIGELPPASSGSALAANVCK	TVIGELPPASSGSALAANVC(UniMod:4)K	3	TVIGELPPASSGSALAANVC(UniMod:4)K3	62937.2	89503	67090
Q5M872	Q5M872	DPEP2_RAT	Dpep2	Dipeptidase 2	1	TVIGSEFIGVGGDYDGTK	TVIGSEFIGVGGDYDGTK	2	TVIGSEFIGVGGDYDGTK2	5179.06	4663.66	6764
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	TVIGSVLLR	TVIGSVLLR	2	TVIGSVLLR2	291779	270507	308105
D4A254	D4A254	D4A254_RAT	Phlpp2	PH domain and leucine rich repeat protein phosphatase 2	1	TVIIENLEGNK	TVIIENLEGNK	2	TVIIENLEGNK2	3723.6	5018.23	2404.42
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	TVIIEQSWGSPK	TVIIEQSWGSPK	2	TVIIEQSWGSPK2	912992	843146	889857
O88813	O88813	ACSL5_RAT	Acsl5	Long-chain-fatty-acid--CoA ligase 5	1	TVILMDPFDDDLMK	TVILMDPFDDDLMK	2	TVILMDPFDDDLMK2	74969.1	97969.6	103802
D4A031	D4A031	D4A031_RAT	Ddx42	DEAD-box helicase 42	1	TVINYDVAR	TVINYDVAR	2	TVINYDVAR2	5852.44		5287.81
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	TVIPSLDVFQLR	TVIPSLDVFQLR	2	TVIPSLDVFQLR2	4349.96	6236.8	3757.13
Q6MG59	Q6MG59	G6B_RAT	Mpig6b	Megakaryocyte and platelet inhibitory receptor G6b	1	TVIQVLGDK	TVIQVLGDK	1	TVIQVLGDK1	4302.59	1402.35	1387.3
Q6MG59	Q6MG59	G6B_RAT	Mpig6b	Megakaryocyte and platelet inhibitory receptor G6b	1	TVIQVLGDK	TVIQVLGDK	2	TVIQVLGDK2	2.21746e+06	2.46406e+06	2.34562e+06
Q3B7T6	Q3B7T6	CNEP1_RAT	Ctdnep1	CTD nuclear envelope phosphatase 1	1	TVIQYQTVR	TVIQYQTVR	2	TVIQYQTVR2	4010.25		2366.74
P24062	P24062	IGF1R_RAT	Igf1r	Insulin-like growth factor 1 receptor	1	TVISNLRPFTLYR	TVISNLRPFTLYR	3	TVISNLRPFTLYR3	11289.7	5450.67	11554.5
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	TVISQSLSK	TVISQSLSK	2	TVISQSLSK2	136437	133527	134638
P16446	P16446	PIPNA_RAT	Pitpna	Phosphatidylinositol transfer protein alpha isoform	1	TVITNEYMK	TVITNEYMK	2	TVITNEYMK2	73394	70227.6	75767.4
Q07205	Q07205;A0A8I6ADE0;A0A8I6AVQ3;A0A8I5ZMQ1	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	TVIVNMVDVAK	TVIVNMVDVAK	2	TVIVNMVDVAK2	172824	184351	129732
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	TVIVTSSQR	TVIVTSSQR	2	TVIVTSSQR2	297291	295240	291834
P28576	P28576	PDGFA_RAT	Pdgfa	Platelet-derived growth factor subunit A	1	TVIYEIPR	TVIYEIPR	2	TVIYEIPR2	9394.22	2313.48	6373.63
P62775	P62775	MTPN_RAT	Mtpn	Myotrophin	1	TVKGPDGLTALEATDNQAIK	TVKGPDGLTALEATDNQAIK	3	TVKGPDGLTALEATDNQAIK3	69565.8	63371.7	64438.6
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	TVLAAAIVDGDR	TVLAAAIVDGDR	2	TVLAAAIVDGDR2	64376.1	70939.4	57009
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	TVLAASFIQYTEGVR	TVLAASFIQYTEGVR	2	TVLAASFIQYTEGVR2	15038.2	25873.4	14891.2
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	TVLAASFIQYTEGVR	TVLAASFIQYTEGVR	3	TVLAASFIQYTEGVR3		3874.33	
F1LTR1	F1LTR1	WDR26_RAT	Wdr26	WD repeat-containing protein 26	1	TVLASDTHQR	TVLASDTHQR	2	TVLASDTHQR2	13696.1	8799.64	
A0A8I6ALB6	A0A8I6ALB6	A0A8I6ALB6_RAT	Tbc1d2b	TBC1 domain family, member 2B	1	TVLAVEAAPGELVGDR	TVLAVEAAPGELVGDR	2	TVLAVEAAPGELVGDR2	1640.46	3466.55	
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	TVLCEGGVPQRPVIFVTR	TVLC(UniMod:4)EGGVPQRPVIFVTR	3	TVLC(UniMod:4)EGGVPQRPVIFVTR3	24117.5	22467.7	20040.7
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	TVLCGTCGQPADK	TVLC(UniMod:4)GTC(UniMod:4)GQPADK	2	TVLC(UniMod:4)GTC(UniMod:4)GQPADK2	22399.9	15421.8	16430.8
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	TVLCTLGGFEELQSMK	TVLC(UniMod:4)TLGGFEELQSMK	2	TVLC(UniMod:4)TLGGFEELQSMK2	20583.6	22893.1	18249.5
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	TVLCTLGGFEELQSMK	TVLC(UniMod:4)TLGGFEELQSMK	3	TVLC(UniMod:4)TLGGFEELQSMK3	6966.21	7563.46	9547.14
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	TVLDALQQR	TVLDALQQR	2	TVLDALQQR2	109830	141223	146502
E9PT66	E9PT66	E9PT66_RAT	Sf3b3	Splicing factor 3b, subunit 3	1	TVLDPVTGDLSDTR	TVLDPVTGDLSDTR	2	TVLDPVTGDLSDTR2	17751.2	17617.8	16455.7
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	TVLDVNEVGTK	TVLDVNEVGTK	2	TVLDVNEVGTK2	3.88736e+06	65836.2	4.02726e+06
A0A8I6ACU9	A0A8I6ACU9	A0A8I6ACU9_RAT	Timm50	Mitochondrial import inner membrane translocase subunit TIM50	1	TVLEHYALEDDPLEAFK	TVLEHYALEDDPLEAFK	3	TVLEHYALEDDPLEAFK3	33914.7	44837.1	39883.6
Q9JI03	Q9JI03	CO5A1_RAT	Col5a1	Collagen alpha-1(V) chain	1	TVLEIDTPK	TVLEIDTPK	2	TVLEIDTPK2	62421.2	47875.4	39136.3
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	TVLELMNPEAQLPQVYPFAADLYQK	TVLELMNPEAQLPQVYPFAADLYQK	3	TVLELMNPEAQLPQVYPFAADLYQK3	3951.56	8612.33	3901.87
Q5M9G3	Q5M9G3	CAPR1_RAT	Caprin1	Caprin-1	1	TVLELQYVLDK	TVLELQYVLDK	2	TVLELQYVLDK2	84572	86776.1	80773.3
Q5XI86	Q5XI86	Q5XI86_RAT	Ptrh2	aminoacyl-tRNA hydrolase	1	TVLGIGPGPVELIDEVTGHLK	TVLGIGPGPVELIDEVTGHLK	3	TVLGIGPGPVELIDEVTGHLK3	24514.3	29737.3	28357.7
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	TVLGNDGHR	TVLGNDGHR	1	TVLGNDGHR1	217486	131327	112355
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	TVLGNDGHR	TVLGNDGHR	2	TVLGNDGHR2	1.436e+06	1.23159e+06	71591.5
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	TVLGVPEVLLGILPGAGGTQR	TVLGVPEVLLGILPGAGGTQR	3	TVLGVPEVLLGILPGAGGTQR3			15425
D3ZJR6	D3ZJR6	D3ZJR6_RAT	Smcr8	SMCR8-C9orf72 complex subunit	1	TVLHTETEIQK	TVLHTETEIQK	3	TVLHTETEIQK3	5827.7		6729.26
F1LSG7	F1LSG7	F1LSG7_RAT	Fgfr2	Fibroblast growth factor receptor	1	TVLIGEYLQIK	TVLIGEYLQIK	2	TVLIGEYLQIK2		3158.31	
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	TVLIMELINNVAK	TVLIMELINNVAK	2	TVLIMELINNVAK2	600232	6618.36	657507
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	TVLIMELINNVAK	TVLIMELINNVAK	3	TVLIMELINNVAK3	52993	57593.4	44098
Q6P6G4	Q6P6G4	Q6P6G4_RAT	Bpgm	Phosphoglycerate mutase	1	TVLISAHGNSSR	TVLISAHGNSSR	3	TVLISAHGNSSR3	4056.74	9693.02	6515.38
D3ZUY0	D3ZUY0	D3ZUY0_RAT	Rdh14	Retinol dehydrogenase 14	1	TVLITGANSGLGR	TVLITGANSGLGR	2	TVLITGANSGLGR2	23274.4	27095.8	20018.3
Q9QYP1	Q9QYP1	LRP4_RAT	Lrp4	Low-density lipoprotein receptor-related protein 4	1	TVLIWENLDRPR	TVLIWENLDRPR	3	TVLIWENLDRPR3	7770	9204.3	11866
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	TVLLEALGSPSEDVR	TVLLEALGSPSEDVR	2	TVLLEALGSPSEDVR2	60256.9	64300.5	69828.1
Q9R0L4	Q9R0L4	CAND2_RAT	Cand2	Cullin-associated NEDD8-dissociated protein 2	1	TVLLEALGSPSEDVR	TVLLEALGSPSEDVR	3	TVLLEALGSPSEDVR3	4747.11	2807.39	5234.75
D3Z9D0	D3Z9D0	D3Z9D0_RAT	RGD1306271	Similar to KIAA1549 protein	1	TVLLGVVEK	TVLLGVVEK	2	TVLLGVVEK2	34934.5	30204.3	45554.5
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	TVLLITQQLSLAER	TVLLITQQLSLAER	2	TVLLITQQLSLAER2	20448.2		22960.5
A0A8I6A371	A0A8I6A371	A0A8I6A371_RAT	Nmi	N-myc (and STAT) interactor	1	TVLLTGLDGIR	TVLLTGLDGIR	2	TVLLTGLDGIR2	15767.3	13460.7	14979.4
A0A8I6A371	A0A8I6A371	A0A8I6A371_RAT	Nmi	N-myc (and STAT) interactor	1	TVLLTGLDGIRVDEETGEDLLNIHFQR	TVLLTGLDGIRVDEETGEDLLNIHFQR	4	TVLLTGLDGIRVDEETGEDLLNIHFQR4	9923.96		
F1LQ91	F1LQ91;A0A8I6ADN8;Q63603	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	0	TVLMATAQMK	TVLMATAQMK	2	TVLMATAQMK2	17855.6	18899.9	18852.7
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	TVLNQILR	TVLNQILR	2	TVLNQILR2	84249.3	74710	64417.2
Q06647	Q06647	ATPO_RAT	Atp5po	ATP synthase subunit O, mitochondrial	1	TVLNSFLSK	TVLNSFLSK	2	TVLNSFLSK2	836308	816793	879471
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	TVLPADGPR	TVLPADGPR	2	TVLPADGPR2	4.59006e+06	4.97398e+06	5.18365e+06
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	TVLPFSQEFQR	TVLPFSQEFQR	2	TVLPFSQEFQR2	441302	480038	490303
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	TVLPFVNTHPEK	TVLPFVNTHPEK	2	TVLPFVNTHPEK2	34334.4	37159.8	29807.6
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	TVLPFVNTHPEK	TVLPFVNTHPEK	3	TVLPFVNTHPEK3	186688	187809	187398
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	TVLQADSPQHDIEILKPVNMLLSIQR	TVLQADSPQHDIEILKPVNMLLSIQR	4	TVLQADSPQHDIEILKPVNMLLSIQR4	3007.41	6148.1	6185.19
Q9QXT4	Q9QXT3;Q9QXT4;Q9JIY6;M0RDW3;Q9QXS7	CMLO1_RAT	Cml1	Probable N-acetyltransferase CML1	0	TVLQFAR	TVLQFAR	2	TVLQFAR2	7915.37	13214.1	
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	TVLQRPLSLIQGPPGTGK	TVLQRPLSLIQGPPGTGK	3	TVLQRPLSLIQGPPGTGK3	15361.3	15151.2	15140.6
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	TVLSANADHMAQIEGLMDDVDFK	TVLSANADHMAQIEGLMDDVDFK	3	TVLSANADHMAQIEGLMDDVDFK3	56394	42256.1	61578.4
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	TVLSANADHMAQIEGLMDDVDFK	TVLSANADHMAQIEGLMDDVDFK	4	TVLSANADHMAQIEGLMDDVDFK4	11626.5	6333.73	15346.4
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	TVLSLFDEDEDK	TVLSLFDEDEDK	2	TVLSLFDEDEDK2	8791.81	12910	2344.1
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	TVLSNVQEELDR	TVLSNVQEELDR	2	TVLSNVQEELDR2	80286.7	77827.2	85701.6
P01026	P01026	CO3_RAT	C3	Complement C3	1	TVLTGATGHLNR	TVLTGATGHLNR	2	TVLTGATGHLNR2	249740	187544	149143
P01026	P01026	CO3_RAT	C3	Complement C3	1	TVLTGATGHLNR	TVLTGATGHLNR	3	TVLTGATGHLNR3	4.03322e+06	3.59872e+06	3.48242e+06
A0A8I6ADN8	A0A8I6ADN8	A0A8I6ADN8_RAT	Dock10	Dedicator of cytokinesis 10	1	TVLTTSHLFPYVK	TVLTTSHLFPYVK	3	TVLTTSHLFPYVK3	14671.7	9967.86	5186.01
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	TVLVSSGLR	TVLVSSGLR	2	TVLVSSGLR2	186854	231872	268268
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	TVLVSSGLREPR	TVLVSSGLREPR	3	TVLVSSGLREPR3	301432	452236	367302
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TVLVTWTPPR	TVLVTWTPPR	2	TVLVTWTPPR2	177035	1.00264e+08	373863
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TVLVTWTPPR	TVLVTWTPPR	3	TVLVTWTPPR3	2.76892e+06	3.25342e+06	3.20767e+06
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	TVLWPNGLSLDIPAGR	TVLWPNGLSLDIPAGR	2	TVLWPNGLSLDIPAGR2	289903	354798	346018
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	TVLWPNGLSLDIPAGR	TVLWPNGLSLDIPAGR	3	TVLWPNGLSLDIPAGR3	10222.6	15733.7	14147.8
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	TVMAHGCYLSEEELNVFSER	TVMAHGC(UniMod:4)YLSEEELNVFSER	3	TVMAHGC(UniMod:4)YLSEEELNVFSER3	17256.1	12733.3	16498.1
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	TVMDLAVVLFETATLR	TVMDLAVVLFETATLR	2	TVMDLAVVLFETATLR2	85755.1	17176.2	26341.6
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	TVMDLAVVLFETATLR	TVMDLAVVLFETATLR	3	TVMDLAVVLFETATLR3	339909	72247.7	37007.4
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	TVMGAAPELK	TVMGAAPELK	2	TVMGAAPELK2	36565.1	33254.4	38586
P02770	P02770	ALBU_RAT	Alb	Albumin	1	TVMGDFAQFVDK	TVMGDFAQFVDK	2	TVMGDFAQFVDK2	336292	201526	208338
P02770	P02770	ALBU_RAT	Alb	Albumin	1	TVMGDFAQFVDK	TVMGDFAQFVDK	3	TVMGDFAQFVDK3	49214	50512.5	56081.6
P58751	P58751	RELN_RAT	Reln	Reelin	1	TVMLDTFSSAPVPQHER	TVMLDTFSSAPVPQHER	2	TVMLDTFSSAPVPQHER2	22786.6	29124	15219.2
P58751	P58751	RELN_RAT	Reln	Reelin	1	TVMLDTFSSAPVPQHER	TVMLDTFSSAPVPQHER	3	TVMLDTFSSAPVPQHER3	461286	468772	421577
Q5U2N3	Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	1	TVMPALEVAQMR	TVMPALEVAQMR	2	TVMPALEVAQMR2	2399.92	5376.21	
Q6P691	Q6P691	Q6P691_RAT	C2cd2	C2 calcium-dependent domain containing 2	1	TVMPCGTVVTTVTAVK	TVMPC(UniMod:4)GTVVTTVTAVK	2	TVMPC(UniMod:4)GTVVTTVTAVK2	19844.8	17929.4	30097.3
Q6P691	Q6P691	Q6P691_RAT	C2cd2	C2 calcium-dependent domain containing 2	1	TVMPCGTVVTTVTAVK	TVMPC(UniMod:4)GTVVTTVTAVK	3	TVMPC(UniMod:4)GTVVTTVTAVK3	2306.01	4493.01	6015.99
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	TVMPYISTTPAK	TVMPYISTTPAK	2	TVMPYISTTPAK2	807692	824012	890987
Q4KLI9	Q4KLI9	FBXW5_RAT	Fbxw5	F-box/WD repeat-containing protein 5	1	TVMVADCSR	TVMVADC(UniMod:4)SR	2	TVMVADC(UniMod:4)SR2	7081.72	8851.04	4449.95
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	TVMVANVGPASYNVEETLTTLR	TVMVANVGPASYNVEETLTTLR	3	TVMVANVGPASYNVEETLTTLR3	18012.5		11944.6
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	TVMVHGFTLGEK	TVMVHGFTLGEK	2	TVMVHGFTLGEK2	3059.41	5280.49	8031.87
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	TVMVHGFTLGEK	TVMVHGFTLGEK	3	TVMVHGFTLGEK3	40237.5	33715.3	54593
Q66H63	Q66H63	GDAP2_RAT	Gdap2	Ganglioside-induced differentiation-associated-protein 2	1	TVMVVVGR	TVMVVVGR	2	TVMVVVGR2	23657.8	25131	19275.3
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	TVNDDQSPSTLNYLIHLQERPVK	TVNDDQSPSTLNYLIHLQERPVK	4	TVNDDQSPSTLNYLIHLQERPVK4	5688.52	3565.93	
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	TVNDELR	TVNDELR	2	TVNDELR2	64445.2	68078	73266.1
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	TVNELAEQLEFIK	TVNELAEQLEFIK	2	TVNELAEQLEFIK2	63449.9	73843.4	73648.7
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	TVNELAEQLEFIK	TVNELAEQLEFIK	3	TVNELAEQLEFIK3	12302.8	11213.9	
P15127	P15127	INSR_RAT	Insr	Insulin receptor	1	TVNESASLR	TVNESASLR	2	TVNESASLR2	6989.85	6850.78	13610.4
A0A0G2JTG3	A0A0G2JTG3	A0A0G2JTG3_RAT	Susd1	Sushi domain containing 1	1	TVNEYCILLR	TVNEYC(UniMod:4)ILLR	2	TVNEYC(UniMod:4)ILLR2	34452.7	27393.4	23247.6
Q63448	Q63448	ACOX3_RAT	Acox3	Peroxisomal acyl-coenzyme A oxidase 3	1	TVNFLEAYPGILGQK	TVNFLEAYPGILGQK	2	TVNFLEAYPGILGQK2	17703.4	38670	25847.5
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	TVNICTLGAVR	TVNIC(UniMod:4)TLGAVR	2	TVNIC(UniMod:4)TLGAVR2	137273	142566	128419
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	TVNIYFPK	TVNIYFPK	2	TVNIYFPK2	20947.6	17563.6	10863.1
Q32PX6	Q32PX6	Q32PX6_RAT	Rhog	Ras homolog family member G	1	TVNLNLWDTAGQEEYDR	TVNLNLWDTAGQEEYDR	3	TVNLNLWDTAGQEEYDR3	20163.8	28309.8	24204.5
Q32PX6	Q32PX6	Q32PX6_RAT	Rhog	Ras homolog family member G	1	TVNLNLWDTAGQEEYDRLR	TVNLNLWDTAGQEEYDRLR	3	TVNLNLWDTAGQEEYDRLR3	61947.9	80484.9	71602.1
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	TVNMTTILIGR	TVNMTTILIGR	2	TVNMTTILIGR2	19856	13759	15855.3
Q9ESC1	Q9ESC1	AGRL4_RAT	Adgrl4	Adhesion G protein-coupled receptor L4	1	TVNNFVEK	TVNNFVEK	2	TVNNFVEK2	254312	285139	261949
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	TVNNPYVLMVLYK	TVNNPYVLMVLYK	2	TVNNPYVLMVLYK2	165807	180841	186480
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	TVNNPYVLMVLYK	TVNNPYVLMVLYK	3	TVNNPYVLMVLYK3	7001.86	10588.2	14931.9
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	TVNPFLADVDK	TVNPFLADVDK	2	TVNPFLADVDK2	78461.9	75168.6	70934
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	TVNPFLADVDKLK	TVNPFLADVDKLK	2	TVNPFLADVDKLK2	5970.95	10764.4	5687.21
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	TVNPFLADVDKLK	TVNPFLADVDKLK	3	TVNPFLADVDKLK3	98752.6	105642	120623
P31721	P31721	C1QB_RAT	C1qb	Complement C1q subcomponent subunit B	1	TVNSALRPNQAIR	TVNSALRPNQAIR	3	TVNSALRPNQAIR3	152591	131756	142430
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	TVNSIVEFFRPPK	TVNSIVEFFRPPK	3	TVNSIVEFFRPPK3	79464.3	62161.2	43311.8
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	TVNTEPEMMQCLK	TVNTEPEMMQC(UniMod:4)LK	2	TVNTEPEMMQC(UniMod:4)LK2	21366.9	17053.6	20350.2
Q6IE64	Q6IE64	C1RL_RAT	C1rl	Complement C1r subcomponent-like protein	1	TVNVFLGHTDVDELLK	TVNVFLGHTDVDELLK	3	TVNVFLGHTDVDELLK3	17036.8	19317.9	15402.6
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	TVNVVQFEPNK	TVNVVQFEPNK	2	TVNVVQFEPNK2	39714.3	34723.7	39158.2
B0BMY7	B0BMY7	B0BMY7_RAT	Twf2	Twinfilin actin-binding protein 2	1	TVNYIQLK	TVNYIQLK	2	TVNYIQLK2	48500.2	48261.3	54897.9
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	TVPFCSTFAAFFTR	TVPFC(UniMod:4)STFAAFFTR	2	TVPFC(UniMod:4)STFAAFFTR2	25334.1	15061.2	23536.3
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	TVPIEAVTSK	TVPIEAVTSK	2	TVPIEAVTSK2	2.86161e+06	2.97081e+06	2.84141e+06
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	TVPIYESPR	TVPIYESPR	2	TVPIYESPR2	143890	120353	140740
A0A8I6AA08	A0A8I6AA08	A0A8I6AA08_RAT	Septin6	Septin	1	TVPLAGHVGFDSLPDQLVNK	TVPLAGHVGFDSLPDQLVNK	3	TVPLAGHVGFDSLPDQLVNK3	22377.5	24736.8	19875.9
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	TVPLAVLQLR	TVPLAVLQLR	2	TVPLAVLQLR2	40086.3	40185.3	34672.3
P58751	P58751	RELN_RAT	Reln	Reelin	1	TVPLDTR	TVPLDTR	2	TVPLDTR2	114493	182629	367421
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	TVPLLFASVVR	TVPLLFASVVR	2	TVPLLFASVVR2	50037.8	59087.5	51835.9
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	TVPLLLAESR	TVPLLLAESR	2	TVPLLLAESR2	54011.9	54468.7	66321.6
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	TVPLSATSR	TVPLSATSR	2	TVPLSATSR2	2.34159e+06	2.37387e+06	2.1993e+06
Q6IE52	Q6IE52	MUG2_RAT	Mug2	Murinoglobulin-2	1	TVPLTCNNPK	TVPLTC(UniMod:4)NNPK	2	TVPLTC(UniMod:4)NNPK2	2.32733e+06	1.56667e+06	1.49098e+06
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	TVPLTETGSK	TVPLTETGSK	2	TVPLTETGSK2	518560	657737	636971
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	TVPMLLAK	TVPMLLAK	2	TVPMLLAK2	114130	101549	110388
P60522	A0A8I6A602;P60522	GBRL2_RAT	Gabarapl2	Gamma-aminobutyric acid receptor-associated protein-like 2	0	TVPQSSLTMGQLYEK	TVPQSSLTMGQLYEK	2	TVPQSSLTMGQLYEK2	17221.9	18504.6	22124.3
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	TVPSSVSGVTVNNSGR	TVPSSVSGVTVNNSGR	2	TVPSSVSGVTVNNSGR2	12509	8625.33	4179.59
Q8R4I6	Q8R4I6	Q8R4I6_RAT	Actn3	Actinin alpha 3	1	TVPWLENR	TVPWLENR	2	TVPWLENR2	294295	219001	222910
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	TVPYADPDHASLK	TVPYADPDHASLK	2	TVPYADPDHASLK2	11760	7156.51	9648.27
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	TVPYADPDHASLK	TVPYADPDHASLK	3	TVPYADPDHASLK3	23732.9	21290.9	31340.6
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	TVQAFMEGSASEVLK	TVQAFMEGSASEVLK	2	TVQAFMEGSASEVLK2	11392.4	10191.5	13641.8
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	TVQAFMEGSASEVLK	TVQAFMEGSASEVLK	3	TVQAFMEGSASEVLK3	2076.08	3424.84	
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	TVQAIVELK	TVQAIVELK	2	TVQAIVELK2	39673.9	41297.7	36851
Q3KR59	Q3KR59	UBP10_RAT	Usp10	Ubiquitin carboxyl-terminal hydrolase 10	1	TVQDALESLVAR	TVQDALESLVAR	2	TVQDALESLVAR2	17569.7	16953.2	25241.2
Q3KR59	Q3KR59	UBP10_RAT	Usp10	Ubiquitin carboxyl-terminal hydrolase 10	1	TVQDALESLVAR	TVQDALESLVAR	3	TVQDALESLVAR3		2762.28	1560.35
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	TVQEQLSVLQVK	TVQEQLSVLQVK	2	TVQEQLSVLQVK2	2755.58	3115.65	3212.02
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	TVQETIDK	TVQETIDK	2	TVQETIDK2	20763.9	14691	14459.2
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	TVQETLK	TVQETLK	2	TVQETLK2	52944	80053.3	82226.9
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	TVQFEENGR	TVQFEENGR	2	TVQFEENGR2	30534.6	32587.6	29215.4
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	TVQFEENGRK	TVQFEENGRK	2	TVQFEENGRK2	5360.97	6933.78	9301.51
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	TVQFEENGRK	TVQFEENGRK	3	TVQFEENGRK3	83704.3	80432.6	85710.5
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	TVQGSGHQEHINIHK	TVQGSGHQEHINIHK	2	TVQGSGHQEHINIHK2	8609.82		10529.4
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	TVQGSGHQEHINIHK	TVQGSGHQEHINIHK	3	TVQGSGHQEHINIHK3	38040.7		405671
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	TVQGSGHQEHINIHK	TVQGSGHQEHINIHK	4	TVQGSGHQEHINIHK4	17397.6		63617.7
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	TVQHLQK	TVQHLQK	1	TVQHLQK1			3707.34
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	TVQHLQK	TVQHLQK	2	TVQHLQK2			21230.6
Q9Z2K5	Q9Z2K5	LST8_RAT	Mlst8	Target of rapamycin complex subunit LST8	1	TVQHQDSQVNALEITPDR	TVQHQDSQVNALEITPDR	3	TVQHQDSQVNALEITPDR3	6614.77	5562.5	9322.05
Q91Y81	Q91Y81	SEPT2_RAT	Septin2	Septin-2	1	TVQIEASTVEIEER	TVQIEASTVEIEER	2	TVQIEASTVEIEER2	25950.3	10264.5	11977.1
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	TVQIECFK	TVQIEC(UniMod:4)FK	2	TVQIEC(UniMod:4)FK2	96174.8	95782.7	120410
Q4FZV0	Q4FZV0	MANBA_RAT	Manba	Beta-mannosidase	1	TVQLIEEPITGSPGLSFYFK	TVQLIEEPITGSPGLSFYFK	3	TVQLIEEPITGSPGLSFYFK3	11747.4	7292.71	
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	TVQMIMETR	TVQMIMETR	2	TVQMIMETR2	44625.8	45054.9	47352.6
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	TVQNVLDLR	TVQNVLDLR	2	TVQNVLDLR2	22042.9	16671.3	16408.3
O35952	O35952	GLO2_RAT	Hagh	Hydroxyacylglutathione hydrolase, mitochondrial	1	TVQQHAGETDPVTTMR	TVQQHAGETDPVTTMR	3	TVQQHAGETDPVTTMR3	10951.9	5883.55	
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	TVQQLAILGAGLMGAGIAQVSVDK	TVQQLAILGAGLMGAGIAQVSVDK	3	TVQQLAILGAGLMGAGIAQVSVDK3	18353	15888.7	25513.9
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	TVQSTVPEDAEK	TVQSTVPEDAEK	2	TVQSTVPEDAEK2	5592.58	7439.73	12867.1
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	TVQSTVPEDAEKR	TVQSTVPEDAEKR	3	TVQSTVPEDAEKR3	18098.8	15229	21950.4
P56603	P56603	SCAM1_RAT	Scamp1	Secretory carrier-associated membrane protein 1	1	TVQTAAANAASTAATSAAQNAFK	TVQTAAANAASTAATSAAQNAFK	3	TVQTAAANAASTAATSAAQNAFK3	103893	107434	122512
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	TVQTDHNAVQR	TVQTDHNAVQR	2	TVQTDHNAVQR2			1911.48
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	TVQTDHNAVQR	TVQTDHNAVQR	3	TVQTDHNAVQR3			62855.3
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	TVQTDVHFLK	TVQTDVHFLK	2	TVQTDVHFLK2	56664.1	54244.4	51642.8
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	TVQTDVHFLK	TVQTDVHFLK	3	TVQTDVHFLK3	537651	531104	585854
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	TVQTIVHR	TVQTIVHR	2	TVQTIVHR2	202658	281774	178904
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	TVQTSLLGLVR	TVQTSLLGLVR	2	TVQTSLLGLVR2	55284.1	65926.2	62013.2
Q9WVC0	A0A8I6AK28;Q9WVC0;A0A8I5ZW51;A0A8I6ARI4	SEPT7_RAT	Septin7	Septin-7	0	TVQVEQSK	TVQVEQSK	1	TVQVEQSK1	4046.52		
Q9WVC0	A0A8I6AK28;Q9WVC0;A0A8I5ZW51;A0A8I6ARI4	SEPT7_RAT	Septin7	Septin-7	0	TVQVEQSK	TVQVEQSK	2	TVQVEQSK2	224579		203285
Q6AYB9	Q6AYB9	Q6AYB9_RAT	Prmt2	Protein arginine methyltransferase 2	1	TVQVSDLETMR	TVQVSDLETMR	2	TVQVSDLETMR2	12342.3	10324.8	8184.1
Q5U2N0	Q5U2N0	PYRG2_RAT	Ctps2	CTP synthase 2	1	TVQVVPHITDAIQDWVMNQAK	TVQVVPHITDAIQDWVMNQAK	3	TVQVVPHITDAIQDWVMNQAK3	12809.2	11373	
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	TVQVVPHITDAIQEWVMR	TVQVVPHITDAIQEWVMR	3	TVQVVPHITDAIQEWVMR3	182456	321986	236440
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	TVQVVPHITDAIQEWVMR	TVQVVPHITDAIQEWVMR	4	TVQVVPHITDAIQEWVMR4	2725.4	7919.81	6267.41
B0BN19	B0BN19	B0BN19_RAT	Rab22a	RAB22A, member RAS oncogene family	1	TVQYQNELHK	TVQYQNELHK	3	TVQYQNELHK3	229170	174668	197662
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	TVRPFSMVCCPVNENAAALIVSDGR	TVRPFSMVC(UniMod:4)C(UniMod:4)PVNENAAALIVSDGR	3	TVRPFSMVC(UniMod:4)C(UniMod:4)PVNENAAALIVSDGR3	4371.74	1296.08	5397.23
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	TVRPTSAPDVTK	TVRPTSAPDVTK	3	TVRPTSAPDVTK3	53295.3	67460.6	74446.2
B1WBT4	B1WBT4	B1WBT4_RAT	Srpk2	SRSF protein kinase 2	1	TVSASSTGDLPK	TVSASSTGDLPK	2	TVSASSTGDLPK2	66042.3	55091.7	60406.3
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	TVSCACPHLMK	TVSC(UniMod:4)AC(UniMod:4)PHLMK	2	TVSC(UniMod:4)AC(UniMod:4)PHLMK2	29149	35767.6	18201.5
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	TVSCACPHLMK	TVSC(UniMod:4)AC(UniMod:4)PHLMK	3	TVSC(UniMod:4)AC(UniMod:4)PHLMK3	365762	435964	352807
D3ZSM9	D3ZSM9	D3ZSM9_RAT	Brat1	BRCA1-associated ATM activator 1	1	TVSCSNPQEAGDSPNSASVEAALQR	TVSC(UniMod:4)SNPQEAGDSPNSASVEAALQR	3	TVSC(UniMod:4)SNPQEAGDSPNSASVEAALQR3	929.02	3074.81	703.923
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	TVSDGTISASK	TVSDGTISASK	2	TVSDGTISASK2	442745	403851	424196
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	TVSDLIDQK	TVSDLIDQK	2	TVSDLIDQK2	315981	328393	298355
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	TVSDNSLSSSK	TVSDNSLSSSK	2	TVSDNSLSSSK2	24058.5	20749.7	36898.3
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TVSDSIK	TVSDSIK	1	TVSDSIK1	30322.2		
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TVSDSIKK	TVSDSIKK	1	TVSDSIKK1			1134.69
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TVSDSIKK	TVSDSIKK	2	TVSDSIKK2			39258.8
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	TVSEDDLK	TVSEDDLK	2	TVSEDDLK2	125378	111104	116557
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	TVSEDDLKDIPAEQMDFR	TVSEDDLKDIPAEQMDFR	3	TVSEDDLKDIPAEQMDFR3	46626.3	57728	47267
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	TVSEEER	TVSEEER	2	TVSEEER2			62614.8
P51158	P51158	RAB28_RAT	Rab28	Ras-related protein Rab-28	1	TVSEESETQPLVALVGNK	TVSEESETQPLVALVGNK	2	TVSEESETQPLVALVGNK2	9577.89	13045.1	11884.2
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	TVSEWISQMATLPQASNLATR	TVSEWISQMATLPQASNLATR	3	TVSEWISQMATLPQASNLATR3	5901.21	6652.55	1728.15
A0A8I5ZRD0	A0A8I5ZRD0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	1	TVSFEALPIMR	TVSFEALPIMR	2	TVSFEALPIMR2	10418.8	11660.3	11510.4
P97682	P97682	ESM1_RAT	Esm1	Endothelial cell-specific molecule 1	1	TVSGMDGVK	TVSGMDGVK	2	TVSGMDGVK2	31673.1	31393	31087.4
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	TVSGNTVEFELHDLEPATEYTLSVFAEK	TVSGNTVEFELHDLEPATEYTLSVFAEK	4	TVSGNTVEFELHDLEPATEYTLSVFAEK4	19126.7	12842.7	15205.3
P62815	P62815	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	1	TVSGVNGPLVILDHVK	TVSGVNGPLVILDHVK	2	TVSGVNGPLVILDHVK2	1386.69		
P62815	P62815	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	1	TVSGVNGPLVILDHVK	TVSGVNGPLVILDHVK	3	TVSGVNGPLVILDHVK3	12851.3	23843.8	23893.8
P13084	A0A8I6A9J5;P13084	NPM_RAT	Npm1	Nucleophosmin	0	TVSLGAGAK	TVSLGAGAK	2	TVSLGAGAK2	25382.5	8792.05	17439.4
A0A8I5ZXD6	A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	1	TVSLSQMLR	TVSLSQMLR	2	TVSLSQMLR2	101017	96727.8	100499
Q2KJ09	Q2KJ09	UBP16_RAT	Usp16	Ubiquitin carboxyl-terminal hydrolase 16	1	TVSLVHESFLDLSLPVLDDQSGK	TVSLVHESFLDLSLPVLDDQSGK	3	TVSLVHESFLDLSLPVLDDQSGK3		13387.4	3920.82
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	TVSNNQQSLFQR	TVSNNQQSLFQR	2	TVSNNQQSLFQR2	5119.3	6872.14	7640.59
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	TVSPALISR	TVSPALISR	2	TVSPALISR2	596270	666638	547729
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	TVSPDRLELEAAQK	TVSPDRLELEAAQK	2	TVSPDRLELEAAQK2	7306.91	3985.86	6391.15
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	TVSPDRLELEAAQK	TVSPDRLELEAAQK	3	TVSPDRLELEAAQK3	872422	1.00809e+06	1.06329e+06
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	TVSPSTIR	TVSPSTIR	2	TVSPSTIR2	20808.9	20511.9	18177.7
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	TVSQGHAALLNLLPITSCPR	TVSQGHAALLNLLPITSC(UniMod:4)PR	3	TVSQGHAALLNLLPITSC(UniMod:4)PR3	9563.57	7281.38	9021.24
A0A8I6G5Q1	A0A8I6G5Q1	A0A8I6G5Q1_RAT	Sema4d	Semaphorin 4D	1	TVSQLLAK	TVSQLLAK	2	TVSQLLAK2	30562.7	33923.3	
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	TVSQTSAPIWEESASFLIR	TVSQTSAPIWEESASFLIR	3	TVSQTSAPIWEESASFLIR3	78524.3	85608.6	82315.2
O88377	O88377	PI42B_RAT	Pip4k2b	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta	1	TVSSEDVAEMHNILK	TVSSEDVAEMHNILK	2	TVSSEDVAEMHNILK2	7057.06	6097.56	5126.91
O88377	O88377	PI42B_RAT	Pip4k2b	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta	1	TVSSEDVAEMHNILK	TVSSEDVAEMHNILK	3	TVSSEDVAEMHNILK3	95132.3	84810	75511
O88377	O88377	PI42B_RAT	Pip4k2b	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta	1	TVSSEDVAEMHNILKK	TVSSEDVAEMHNILKK	4	TVSSEDVAEMHNILKK4	17320.7	26212.6	17479.9
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	TVSSHEVFLQR	TVSSHEVFLQR	2	TVSSHEVFLQR2	3016.14	3556.69	5710.41
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	TVSSHEVFLQR	TVSSHEVFLQR	3	TVSSHEVFLQR3	81348.6	72322	74294.6
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	TVSSLSK	TVSSLSK	1	TVSSLSK1	34911.3	32501.5	
Q3B7U1	Q3B7U1	Q3B7U1_RAT	Maged2	MAGE family member D2	1	TVSSVTDSK	TVSSVTDSK	2	TVSSVTDSK2	57348.6	76546.3	71234.4
D3ZE20	D3ZE20	D3ZE20_RAT	Nfatc1	Nuclear factor of activated T-cells 1	1	TVSTTSHEAILSNTK	TVSTTSHEAILSNTK	3	TVSTTSHEAILSNTK3	18480.3	21293.6	17521.2
P24329	P24329	THTR_RAT	Tst	Thiosulfate sulfurtransferase	1	TVSVLNGGFR	TVSVLNGGFR	2	TVSVLNGGFR2	17320.4	23349.7	18651.2
D3ZLM5	D3ZLM5	D3ZLM5_RAT	Nhlrc2	NHL repeat containing 2	1	TVSVLPVFK	TVSVLPVFK	2	TVSVLPVFK2	14851.6	12133.1	18841.2
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	TVSVNEGYR	TVSVNEGYR	2	TVSVNEGYR2	82575.4	75177	88219
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	TVSWAVTPK	TVSWAVTPK	2	TVSWAVTPK2	2.57995e+07	2.28802e+07	2.13659e+07
D3ZTW9	D3ZTW9	D3ZTW9_RAT	Exog	Exo/endonuclease G	1	TVSYQVIGEDNVAVPSHLYK	TVSYQVIGEDNVAVPSHLYK	3	TVSYQVIGEDNVAVPSHLYK3	7422.72	6847.19	4160.09
P23377	P23377	FURIN_RAT	Furin	Furin	1	TVTACLGEPNHISR	TVTAC(UniMod:4)LGEPNHISR	3	TVTAC(UniMod:4)LGEPNHISR3	16687.3	9594	23039.8
Q5U2T5	Q5U2T5	Q5U2T5_RAT	Stard3	StAR-related lipid transfer protein 3	1	TVTACQILQR	TVTAC(UniMod:4)QILQR	2	TVTAC(UniMod:4)QILQR2	5961.88	8458.09	
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	TVTAETK	TVTAETK	1	TVTAETK1			4159.26
Q9R1J8	Q9R1J8	P3H1_RAT	P3h1	Prolyl 3-hydroxylase 1	1	TVTAEVQPQCGR	TVTAEVQPQC(UniMod:4)GR	2	TVTAEVQPQC(UniMod:4)GR2	15145.1	9312.9	12324.8
P62804	P62804	H4_RAT	H4c16	Histone H4	1	TVTAMDVVYALK	TVTAMDVVYALK	2	TVTAMDVVYALK2	81216.3	53345.9	48105.2
P62804	P62804	H4_RAT	H4c16	Histone H4	1	TVTAMDVVYALK	TVTAMDVVYALK	3	TVTAMDVVYALK3		4501.54	2674.32
P62804	P62804	H4_RAT	H4c16	Histone H4	1	TVTAMDVVYALKR	TVTAMDVVYALKR	3	TVTAMDVVYALKR3		8066.89	5886.93
Q63769	Q63769	SRPX_RAT	Srpx	Sushi repeat-containing protein SRPX	1	TVTCMDNK	TVTC(UniMod:4)MDNK	2	TVTC(UniMod:4)MDNK2	5256.66		
P49651	P49651	P2RY1_RAT	P2ry1	P2Y purinoceptor 1	1	TVTCYDSTSDEYLR	TVTC(UniMod:4)YDSTSDEYLR	2	TVTC(UniMod:4)YDSTSDEYLR2	11371.9	8370.45	11391
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TVTDMLMTICAR	TVTDMLMTIC(UniMod:4)AR	2	TVTDMLMTIC(UniMod:4)AR2	250946	242016	219378
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	TVTDMLMTICAR	TVTDMLMTIC(UniMod:4)AR	3	TVTDMLMTIC(UniMod:4)AR3	103918	99398.8	81910.7
D3ZUM4	D3ZUM4	D3ZUM4_RAT	Glb1	Beta-galactosidase	1	TVTEALGILCPNGPVK	TVTEALGILC(UniMod:4)PNGPVK	2	TVTEALGILC(UniMod:4)PNGPVK2	19940.3	22340.6	18758.4
D3ZUM4	D3ZUM4	D3ZUM4_RAT	Glb1	Beta-galactosidase	1	TVTEALGILCPNGPVK	TVTEALGILC(UniMod:4)PNGPVK	3	TVTEALGILC(UniMod:4)PNGPVK3	12231.7		12634.5
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	TVTEGGAAHR	TVTEGGAAHR	2	TVTEGGAAHR2			6116.61
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	TVTFQQER	TVTFQQER	2	TVTFQQER2	33921.3	38150.9	40748.6
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	TVTIECR	TVTIEC(UniMod:4)R	2	TVTIEC(UniMod:4)R2	973792	1.00928e+06	957678
Q6AZ50	Q6AZ50	ATG3_RAT	Atg3	Ubiquitin-like-conjugating enzyme ATG3	1	TVTIENHPHLPPPPMCSVHPCR	TVTIENHPHLPPPPMC(UniMod:4)SVHPC(UniMod:4)R	3	TVTIENHPHLPPPPMC(UniMod:4)SVHPC(UniMod:4)R3	6391.07	7460.52	
Q6AZ50	Q6AZ50	ATG3_RAT	Atg3	Ubiquitin-like-conjugating enzyme ATG3	1	TVTIENHPHLPPPPMCSVHPCR	TVTIENHPHLPPPPMC(UniMod:4)SVHPC(UniMod:4)R	4	TVTIENHPHLPPPPMC(UniMod:4)SVHPC(UniMod:4)R4	59635	75767.5	52188.9
Q925Q9	Q925Q9	SH3K1_RAT	Sh3kbp1	SH3 domain-containing kinase-binding protein 1	1	TVTISQVSDNK	TVTISQVSDNK	2	TVTISQVSDNK2	20963	16567.7	12339.3
P20786	P20786	PGFRA_RAT	Pdgfra	Platelet-derived growth factor receptor alpha	1	TVTISVHEK	TVTISVHEK	2	TVTISVHEK2	19314.1	15927.3	17000.7
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	TVTIVVR	TVTIVVR	2	TVTIVVR2	262579	246482	252899
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	TVTLELLDNGAGADATK	TVTLELLDNGAGADATK	2	TVTLELLDNGAGADATK2	13239.2	8823.08	5639.61
A0A096MKB0	A0A096MKB0	A0A096MKB0_RAT	Rab24	Max dimerization protein 3	1	TVTLGIWDTAGSER	TVTLGIWDTAGSER	2	TVTLGIWDTAGSER2	2858.92	10115.8	8954.59
D3ZUC2	D3ZUC2	D3ZUC2_RAT	Mov10	RNA helicase	1	TVTLVEAIK	TVTLVEAIK	2	TVTLVEAIK2	16038.2	19041.1	19754.3
P20909	P20909	COBA1_RAT	Col11a1	Collagen alpha-1(XI) chain	1	TVTMIVDCK	TVTMIVDC(UniMod:4)K	2	TVTMIVDC(UniMod:4)K2	40898.9	47468.8	40222.8
P63018	A0A8I6AQL9;P63018	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	TVTNAVVTVPAYFNDSQR	TVTNAVVTVPAYFNDSQR	3	TVTNAVVTVPAYFNDSQR3	952622	910189	985208
P47942	P47942	DPYL2_RAT	Dpysl2	Dihydropyrimidinase-related protein 2	1	TVTPASSAK	TVTPASSAK	2	TVTPASSAK2	35189.3		47670.8
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	TVTPPPMCTYR	TVTPPPMC(UniMod:4)TYR	2	TVTPPPMC(UniMod:4)TYR2	18312.8	23621.6	18960.9
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	TVTSATIVYHLAR	TVTSATIVYHLAR	3	TVTSATIVYHLAR3	17582	12617.9	21334.1
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	TVTVEFK	TVTVEFK	2	TVTVEFK2	44380.3	36461.6	45383.2
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	TVTVISPEDEQK	TVTVISPEDEQK	2	TVTVISPEDEQK2	83122	61788	104553
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	TVTVISPEDEQKGEK	TVTVISPEDEQKGEK	2	TVTVISPEDEQKGEK2	12351.5	15395.3	8427.91
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	TVTVISPEDEQKGEK	TVTVISPEDEQKGEK	3	TVTVISPEDEQKGEK3	152576	182244	174550
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	TVTVNTEQK	TVTVNTEQK	2	TVTVNTEQK2	1.09196e+06	1.224e+06	1.20286e+06
Q9QX79	Q9QX79	FETUB_RAT	Fetub	Fetuin-B	1	TVTVSCEFFESQDQVPGGENPADTQDAK	TVTVSC(UniMod:4)EFFESQDQVPGGENPADTQDAK	4	TVTVSC(UniMod:4)EFFESQDQVPGGENPADTQDAK4	19142.6	27937.7	31068.2
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	TVTVTKPTGVSFK	TVTVTKPTGVSFK	3	TVTVTKPTGVSFK3	16972.7	14482	19278.9
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	TVTVTVGPAGPTLVDFQLK	TVTVTVGPAGPTLVDFQLK	2	TVTVTVGPAGPTLVDFQLK2	591851	396058	301683
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	TVTVTVGPAGPTLVDFQLK	TVTVTVGPAGPTLVDFQLK	3	TVTVTVGPAGPTLVDFQLK3	56434.6	38433.5	21048.1
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	TVTVTVGPAGPTLVDFQLKR	TVTVTVGPAGPTLVDFQLKR	3	TVTVTVGPAGPTLVDFQLKR3	80733.3	74826.6	79666
P07151	P07151	B2MG_RAT	B2m	Beta-2-microglobulin	1	TVTWDRDM	TVTWDRDM	2	TVTWDRDM2	905849	988640	1.11519e+06
A0A8I5ZP70	A0A8I5ZP70	A0A8I5ZP70_RAT	Tom1l2	Target of myb1 like 2 membrane trafficking protein	1	TVTYEDPQAVGGLASALDNR	TVTYEDPQAVGGLASALDNR	3	TVTYEDPQAVGGLASALDNR3	16118.1	17421	22028.2
A0A8I5ZP70	A0A8I5ZP70	A0A8I5ZP70_RAT	Tom1l2	Target of myb1 like 2 membrane trafficking protein	1	TVTYEDPQAVGGLASALDNRK	TVTYEDPQAVGGLASALDNRK	3	TVTYEDPQAVGGLASALDNRK3	88764	114972	111977
D4A748	D4A748	D4A748_RAT	Wdfy4	WDFY family member 4	1	TVVALLQGSVR	TVVALLQGSVR	2	TVVALLQGSVR2	2324.17	2135.45	2420.91
B1H282	B1H282	B1H282_RAT	Colgalt1	Collagen beta(1-O)galactosyltransferase 1	1	TVVAPMLDSR	TVVAPMLDSR	2	TVVAPMLDSR2	19292.7	8549.12	23602.3
O88658	O88658	KIF1B_RAT	Kif1b	Kinesin-like protein KIF1B	1	TVVAVEVQDLK	TVVAVEVQDLK	2	TVVAVEVQDLK2	9044.61	16129.1	8785.15
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	TVVDESENFFSAFLSPSDVQTIQK	TVVDESENFFSAFLSPSDVQTIQK	3	TVVDESENFFSAFLSPSDVQTIQK3	2338.88	9042.23	
B0BNI5	B0BNI5	OLFL3_RAT	Olfml3	Olfactomedin-like protein 3	1	TVVDSSVFPAER	TVVDSSVFPAER	2	TVVDSSVFPAER2	90471.3	78509.4	66960.4
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	TVVDVGEK	TVVDVGEK	2	TVVDVGEK2	85808.6	79321.3	75128.3
Q8VHF5	Q8VHF5	CISY_RAT	Cs	Citrate synthase, mitochondrial	1	TVVGQITVDMMYGGMR	TVVGQITVDMMYGGMR	2	TVVGQITVDMMYGGMR2	115116	63925.4	67678
Q8VHF5	Q8VHF5	CISY_RAT	Cs	Citrate synthase, mitochondrial	1	TVVGQITVDMMYGGMR	TVVGQITVDMMYGGMR	3	TVVGQITVDMMYGGMR3	41697.5	61132.6	43466.4
Q5BJR4	Q5BJR4	PRUN2_RAT	Prune2	Protein prune homolog 2	1	TVVIGEQEQR	TVVIGEQEQR	2	TVVIGEQEQR2	137516	137856	122752
O08775	O08775	VGFR2_RAT	Kdr	Vascular endothelial growth factor receptor 2	1	TVVIPCR	TVVIPC(UniMod:4)R	2	TVVIPC(UniMod:4)R2	157650	138700	123780
P01026	P01026	CO3_RAT	C3	Complement C3	1	TVVIVIETPDGVPIK	TVVIVIETPDGVPIK	2	TVVIVIETPDGVPIK2	152531	130075	134354
P01026	P01026	CO3_RAT	C3	Complement C3	1	TVVIVIETPDGVPIK	TVVIVIETPDGVPIK	3	TVVIVIETPDGVPIK3	13910	10703.9	16494.5
P01026	P01026	CO3_RAT	C3	Complement C3	1	TVVIVIETPDGVPIKR	TVVIVIETPDGVPIKR	2	TVVIVIETPDGVPIKR2	67922.6	49063.1	34684.9
P01026	P01026	CO3_RAT	C3	Complement C3	1	TVVIVIETPDGVPIKR	TVVIVIETPDGVPIKR	3	TVVIVIETPDGVPIKR3	1.38926e+06	1.29435e+06	1.04881e+06
P01026	P01026	CO3_RAT	C3	Complement C3	1	TVVIVIETPDGVPIKR	TVVIVIETPDGVPIKR	4	TVVIVIETPDGVPIKR4	11673.9	8761.55	6538.18
O08730	O08730	GLYG_RAT	Gyg1	Glycogenin-1	1	TVVLASPQVSDSMR	TVVLASPQVSDSMR	2	TVVLASPQVSDSMR2	113593	81584.3	94859.3
B0BN83	B0BN83	B0BN83_RAT	Armc1	Armadillo repeat-containing protein 1	1	TVVLHIDGLDDTSRR	TVVLHIDGLDDTSRR	3	TVVLHIDGLDDTSRR3	2755.8	8353.54	7464.78
B0BN83	B0BN83	B0BN83_RAT	Armc1	Armadillo repeat-containing protein 1	1	TVVLHIDGLDDTSRR	TVVLHIDGLDDTSRR	4	TVVLHIDGLDDTSRR4	10722.8	13233.7	6928.92
P18297	D3ZT59;P18297	SPRE_RAT	Spr	Sepiapterin reductase	0	TVVNISSLCALQPFK	TVVNISSLC(UniMod:4)ALQPFK	2	TVVNISSLC(UniMod:4)ALQPFK2	5714.63	4501.14	5767.13
P53678	P53678	AP3M2_RAT	Ap3m2	AP-3 complex subunit mu-2	1	TVVNTITGSTNVGDQLPTGQLSVVPWR	TVVNTITGSTNVGDQLPTGQLSVVPWR	3	TVVNTITGSTNVGDQLPTGQLSVVPWR3	4048.39		4309.59
P18614	P18614	ITA1_RAT	Itga1	Integrin alpha-1	1	TVVQHSPNLIFSGIEEIQK	TVVQHSPNLIFSGIEEIQK	3	TVVQHSPNLIFSGIEEIQK3	14514.4	14488.8	8034.08
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	TVVQLCGHSLETK	TVVQLC(UniMod:4)GHSLETK	2	TVVQLC(UniMod:4)GHSLETK2	3239.54	2842.38	1013.62
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	TVVQLCGHSLETK	TVVQLC(UniMod:4)GHSLETK	3	TVVQLC(UniMod:4)GHSLETK3	29894.5	27831	46177.9
A0A8I6A263	A0A8I6A263	A0A8I6A263_RAT	Aimp1	Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	1	TVVSGLVNHVPLEQMQNR	TVVSGLVNHVPLEQMQNR	3	TVVSGLVNHVPLEQMQNR3	85172	77245.7	99959.1
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	TVVSGLVQFVPK	TVVSGLVQFVPK	2	TVVSGLVQFVPK2	16902.7	14100	15771.5
F1LVV4	F1LVV4	F1LVV4_RAT	Rcc2	Regulator of chromosome condensation 2	1	TVVSGSCAAHSLLITTEGK	TVVSGSC(UniMod:4)AAHSLLITTEGK	3	TVVSGSC(UniMod:4)AAHSLLITTEGK3	5735	3328.46	3605.48
Q9Z1L0	Q9Z1L0	PK3CB_RAT	Pik3cb	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform	1	TVVSSEISGK	TVVSSEISGK	2	TVVSSEISGK2	40994.9	47329.2	20280.9
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	TVVTEAGNLLK	TVVTEAGNLLK	2	TVVTEAGNLLK2	172603	145296	111282
Q9QZA6	Q9QZA6	CD151_RAT	Cd151	CD151 antigen	1	TVVTGCGK	TVVTGC(UniMod:4)GK	1	TVVTGC(UniMod:4)GK1	19954.9		17518.9
Q9QZA6	Q9QZA6	CD151_RAT	Cd151	CD151 antigen	1	TVVTGCGK	TVVTGC(UniMod:4)GK	2	TVVTGC(UniMod:4)GK2	752069		505475
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	TVVTGIEMFHK	TVVTGIEMFHK	2	TVVTGIEMFHK2	20582.5	18546.3	16327.8
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	TVVTGIEMFHK	TVVTGIEMFHK	3	TVVTGIEMFHK3	233041	258505	222663
P17164	P17164	FUCO_RAT	Fuca1	Tissue alpha-L-fucosidase	1	TVVWYTTK	TVVWYTTK	2	TVVWYTTK2	22691.7	18051.6	25455.5
P21213	P21213	HUTH_RAT	Hal	Histidine ammonia-lyase	1	TVVYGITTGFGK	TVVYGITTGFGK	2	TVVYGITTGFGK2	8053.85	8716.27	
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	TVWDWELMNDIK	TVWDWELMNDIK	2	TVWDWELMNDIK2	66413.7	67537	65210.7
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	TVWDWELMNDIKPIWQR	TVWDWELMNDIKPIWQR	3	TVWDWELMNDIKPIWQR3	115139	88065	76784.7
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	TVWDWELMNDIKPIWQRPSK	TVWDWELMNDIKPIWQRPSK	3	TVWDWELMNDIKPIWQRPSK3	897491	875600	653941
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	TVWDWELMNDIKPIWQRPSK	TVWDWELMNDIKPIWQRPSK	4	TVWDWELMNDIKPIWQRPSK4	47171.7	51789.6	60888.6
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	TVWEVPER	TVWEVPER	2	TVWEVPER2	606624	623362	588988
P14740	P14740	DPP4_RAT	Dpp4	Dipeptidyl peptidase 4	1	TVWIPYPK	TVWIPYPK	2	TVWIPYPK2	5167.2	16396.2	10923.7
D4ABB8	D4ABB8	ATP9B_RAT	Atp9b	Probable phospholipid-transporting ATPase IIB	1	TVWLGCPEK	TVWLGC(UniMod:4)PEK	2	TVWLGC(UniMod:4)PEK2	11744.4	15144	17367.7
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	TVWQDLICR	TVWQDLIC(UniMod:4)R	2	TVWQDLIC(UniMod:4)R2	84294.4	87802.9	103161
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	TVWQYHFR	TVWQYHFR	2	TVWQYHFR2	59670	68698.7	55540
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	TVWSAHSGPTR	TVWSAHSGPTR	2	TVWSAHSGPTR2	74285	62215.4	46923.6
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	TVWSAHSGPTR	TVWSAHSGPTR	3	TVWSAHSGPTR3	733948	671857	581284
P12928	P12928	KPYR_RAT	Pklr	Pyruvate kinase PKLR	1	TVWVDYHNITR	TVWVDYHNITR	3	TVWVDYHNITR3	12021.2	6036.39	7351.09
Q8K4T4	Q8K4T4	FLIP1_RAT	Filip1	Filamin-A-interacting protein 1	1	TVYELENEKHK	TVYELENEKHK	3	TVYELENEKHK3	10727.6	3894.51	5344.67
P47875	P47875	CSRP1_RAT	Csrp1	Cysteine and glycine-rich protein 1	1	TVYFAEEVQCEGNSFHK	TVYFAEEVQC(UniMod:4)EGNSFHK	3	TVYFAEEVQC(UniMod:4)EGNSFHK3	114578	109215	104893
D3ZTX0	D3ZTX0	TMED7_RAT	Tmed7	Transmembrane emp24 domain-containing protein 7	1	TVYFDFQVGEDPPLFPSENR	TVYFDFQVGEDPPLFPSENR	3	TVYFDFQVGEDPPLFPSENR3	30330.6	23296.1	19086.9
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	TVYGGGCSEMLMAHAVTMLASR	TVYGGGC(UniMod:4)SEMLMAHAVTMLASR	3	TVYGGGC(UniMod:4)SEMLMAHAVTMLASR3	250787	287196	318255
F1LR10	A0A8I6ANF9;F1LR10;Q4KM31	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	0	TVYPMER	TVYPMER	2	TVYPMER2	139438	186574	179385
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	TVYQQVLSLELPSVLR	TVYQQVLSLELPSVLR	2	TVYQQVLSLELPSVLR2	5581.53	6245.29	9240.93
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	TVYQQVLSLELPSVLR	TVYQQVLSLELPSVLR	3	TVYQQVLSLELPSVLR3	5117.57	6061.53	7619.97
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	TVYQYQCTTWK	TVYQYQC(UniMod:4)TTWK	2	TVYQYQC(UniMod:4)TTWK2	55543.2	57202.3	76286.4
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	TVYSILR	TVYSILR	2	TVYSILR2	361949	305314	267781
Q5XHY5	Q5XHY5	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	1	TVYSVFGFSFK	TVYSVFGFSFK	2	TVYSVFGFSFK2	2192		2229.02
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	TVYVSVLPTTADG	TVYVSVLPTTADG	2	TVYVSVLPTTADG2	14623.6		14131.2
F1MAD3	F1MAD3	F1MAD3_RAT	Pkd1	Polycystin 1, transient receptor potential channel interacting	1	TWAGAALAMVDSPAIQHFLVSK	TWAGAALAMVDSPAIQHFLVSK	3	TWAGAALAMVDSPAIQHFLVSK3	1880.96		
A0A8I6G1Q9	A0A8I6G1Q9	A0A8I6G1Q9_RAT	Cd69	Cd69 molecule	1	TWALAQK	TWALAQK	2	TWALAQK2	13514.8	18404.1	13982.1
A0A8J8XQI9	A0A8J8XQI9	A0A8J8XQI9_RAT	Bche	Carboxylic ester hydrolase	1	TWANFAK	TWANFAK	2	TWANFAK2	7417.42		
Q5GF25	Q5GF25	MANEA_RAT	Manea	Glycoprotein endo-alpha-1,2-mannosidase	1	TWANLLTPSGSQSVR	TWANLLTPSGSQSVR	2	TWANLLTPSGSQSVR2	10909	9697.73	19463.4
Q925N6	Q925N6	IGSF1_RAT	Igsf1	Immunoglobulin superfamily member 1	1	TWASPVVTPGSR	TWASPVVTPGSR	2	TWASPVVTPGSR2	20574.1	16841.6	7660.17
P15978	P15978	HA11_RAT	RT1-Aw2	Class I histocompatibility antigen, Non-RT1.A alpha-1 chain	1	TWAVADFAAWITR	TWAVADFAAWITR	2	TWAVADFAAWITR2	41601.4	38274.4	29173.9
P15978	P15978	HA11_RAT	RT1-Aw2	Class I histocompatibility antigen, Non-RT1.A alpha-1 chain	1	TWAVADFAAWITR	TWAVADFAAWITR	3	TWAVADFAAWITR3	18913	15175.8	17807.4
Q4QQV2	Q4QQV2	DOK1_RAT	Dok1	Docking protein 1	1	TWAVLYPASPHGVAR	TWAVLYPASPHGVAR	2	TWAVLYPASPHGVAR2	11192.9	9938.76	14333
Q4QQV2	Q4QQV2	DOK1_RAT	Dok1	Docking protein 1	1	TWAVLYPASPHGVAR	TWAVLYPASPHGVAR	3	TWAVLYPASPHGVAR3	98990.3	105099	118937
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	TWAWEAVEALESHCR	TWAWEAVEALESHC(UniMod:4)R	2	TWAWEAVEALESHC(UniMod:4)R2	6127.82	8759.16	10354.2
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	TWAWEAVEALESHCR	TWAWEAVEALESHC(UniMod:4)R	3	TWAWEAVEALESHC(UniMod:4)R3	26436.3	43407.6	31953.7
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	TWDDDYVLK	TWDDDYVLK	2	TWDDDYVLK2	13482.3	19064.5	16750.9
F7EUU4	F7EUU4	F7EUU4_RAT	Cops5	COP9 signalosome subunit 5	1	TWELANNMQEAQSIDEIYK	TWELANNMQEAQSIDEIYK	3	TWELANNMQEAQSIDEIYK3	6877.52	3166.7	6725.07
Q66HC5	Q66HC5	NUP93_RAT	Nup93	Nuclear pore complex protein Nup93	1	TWFQEYMNSK	TWFQEYMNSK	2	TWFQEYMNSK2	11154.1	10862.9	8272.2
Q63789	Q63789	P55G_RAT	Pik3r3	Phosphatidylinositol 3-kinase regulatory subunit gamma	1	TWFVEDVNR	TWFVEDVNR	2	TWFVEDVNR2		3323.37	
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	TWGDAGAAAGGGTPSK	TWGDAGAAAGGGTPSK	2	TWGDAGAAAGGGTPSK2	776481	817539	839841
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	TWGDAGAAAGGGTPSK	TWGDAGAAAGGGTPSK	3	TWGDAGAAAGGGTPSK3	7696.62	14349.1	21324.4
Q68FU7	Q68FU7	COQ6_RAT	Coq6	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial	1	TWGLQATNAVSPLK	TWGLQATNAVSPLK	2	TWGLQATNAVSPLK2	9743.56	5723.57	7366.43
D3ZED8	D3ZED8	D3ZED8_RAT	Pmel	Premelanosome protein	1	TWGQYWQVLGGPESK	TWGQYWQVLGGPESK	2	TWGQYWQVLGGPESK2	160318	163167	165971
D3ZED8	D3ZED8	D3ZED8_RAT	Pmel	Premelanosome protein	1	TWGQYWQVLGGPESK	TWGQYWQVLGGPESK	3	TWGQYWQVLGGPESK3	11969.9	12565.6	9128.56
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	TWHSWMDNIR	TWHSWMDNIR	2	TWHSWMDNIR2	19731.5	15282.5	11767.8
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	TWHSWMDNIR	TWHSWMDNIR	3	TWHSWMDNIR3	74598.3	76481.9	58433.1
P61621	A0A8I6AA70;P61621	S61A1_RAT	Sec61a1	Protein transport protein Sec61 subunit alpha isoform 1	0	TWIEVSGSSAK	TWIEVSGSSAK	2	TWIEVSGSSAK2	72592.2	72297.3	57733.1
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	TWISLSK	TWISLSK	2	TWISLSK2	28883	24688.7	
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	TWKPTLVILR	TWKPTLVILR	2	TWKPTLVILR2	240681	171168	199749
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	TWKPTLVILR	TWKPTLVILR	3	TWKPTLVILR3	722998	779725	722705
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	TWLDSAK	TWLDSAK	2	TWLDSAK2	249104	250879	248489
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	TWLDSMAK	TWLDSMAK	2	TWLDSMAK2	14225.4	18444.6	10211.3
D3ZSX4	D3ZSX4	D3ZSX4_RAT	Tmem167b	Protein kish	1	TWLLSEK	TWLLSEK	2	TWLLSEK2	74852.4	75837.1	74451.1
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	TWLVGNK	TWLVGNK	2	TWLVGNK2		20156.6	15305.8
D3ZS97	D3ZS97	D3ZS97_RAT	Cd226	CD226 molecule	1	TWLVQLVIWEK	TWLVQLVIWEK	2	TWLVQLVIWEK2	19629.7	18492.4	16133.6
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	TWLWWHNFR	TWLWWHNFR	2	TWLWWHNFR2	6648.03	5841.71	4671.49
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	TWLWWHNFR	TWLWWHNFR	3	TWLWWHNFR3	31130.1	35284.2	33080.4
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	TWNDPSVQQDIK	TWNDPSVQQDIK	2	TWNDPSVQQDIK2	3.13799e+06	3.14371e+06	3.10203e+06
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	TWNDPSVQQDIK	TWNDPSVQQDIK	3	TWNDPSVQQDIK3	24672.6	14127	12521.4
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	TWNQSIALR	TWNQSIALR	2	TWNQSIALR2	189061	247540	223988
Q63787	Q63787	P85A_RAT	Pik3r1	Phosphatidylinositol 3-kinase regulatory subunit alpha	1	TWNVGSSNR	TWNVGSSNR	2	TWNVGSSNR2	20282.6	20505.6	31210.4
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	TWPAIIDTDDLPR	TWPAIIDTDDLPR	2	TWPAIIDTDDLPR2	30716.4	36408.7	22871.6
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	TWPDHGVPSDPGGVLDFLEEVHHK	TWPDHGVPSDPGGVLDFLEEVHHK	3	TWPDHGVPSDPGGVLDFLEEVHHK3	14368.4	14633.5	7701.97
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	TWPDHGVPSDPGGVLDFLEEVHHK	TWPDHGVPSDPGGVLDFLEEVHHK	4	TWPDHGVPSDPGGVLDFLEEVHHK4	77340.6	71231.3	56540.8
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	TWPHFTVVEN	TWPHFTVVEN	2	TWPHFTVVEN2	102806	110417	93616.5
P63074	P63074;A0A8I6G664	IF4E_RAT	Eif4e	Eukaryotic translation initiation factor 4E	0	TWQANLR	TWQANLR	2	TWQANLR2	97171.9	74466.5	68394
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	TWQDYKR	TWQDYKR	2	TWQDYKR2	1.37826e+06	1.2959e+06	1.40658e+06
D3ZCG1	D3ZCG1	D3ZCG1_RAT	Dipk2b	Divergent protein kinase domain 2B	1	TWRPVEISR	TWRPVEISR	3	TWRPVEISR3	28554.5	23227.3	13845.9
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	TWSQLPGTAR	TWSQLPGTAR	2	TWSQLPGTAR2	79121.5	78209.4	66257
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	TWSRDEVMGDNLLLSSVFQFSR	TWSRDEVMGDNLLLSSVFQFSR	3	TWSRDEVMGDNLLLSSVFQFSR3	5837.76	2608.95	
P16391	P16391	HA12_RAT		RT1 class I histocompatibility antigen, AA alpha chain	1	TWTAADFAAQITR	TWTAADFAAQITR	2	TWTAADFAAQITR2	419930	481207	492376
P16391	P16391	HA12_RAT		RT1 class I histocompatibility antigen, AA alpha chain	1	TWTAADFAAQITR	TWTAADFAAQITR	3	TWTAADFAAQITR3	53869.8	63771.5	77119.5
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	TWTEDWR	TWTEDWR	2	TWTEDWR2	130697	149057	159946
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	TWTGFQSLIQK	TWTGFQSLIQK	2	TWTGFQSLIQK2	8325.21	16184.4	14497.8
P68182	P68182;P27791	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	0	TWTLCGTPEYLAPEIILSK	TWTLC(UniMod:4)GTPEYLAPEIILSK	3	TWTLC(UniMod:4)GTPEYLAPEIILSK3	12707.2	6510.37	12091
D3ZUV9	D3ZUV9	D3ZUV9_RAT	Cnot3	CCR4-NOT transcription complex, subunit 3	1	TWVASNEIK	TWVASNEIK	2	TWVASNEIK2		9085.45	16771.5
A0A8I5ZLY7	A0A8I5ZLY7	A0A8I5ZLY7_RAT	Tapbp	TAP binding protein	1	TWVSTVR	TWVSTVR	2	TWVSTVR2	322801	377644	288113
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	TWVTLRDEQTILPLVDEALQHTTTK	TWVTLRDEQTILPLVDEALQHTTTK	4	TWVTLRDEQTILPLVDEALQHTTTK4	21218	24520.7	
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	TWVVSPAEK	TWVVSPAEK	2	TWVVSPAEK2	201301	228077	242442
Q5PQZ9	Q5PQZ9	Q5PQZ9_RAT	Ndufc2	NADH dehydrogenase [ubiquinone] 1 subunit C2	1	TYAEILEPFHPVR	TYAEILEPFHPVR	2	TYAEILEPFHPVR2	7278.81	5795.53	3603.9
Q5PQZ9	Q5PQZ9	Q5PQZ9_RAT	Ndufc2	NADH dehydrogenase [ubiquinone] 1 subunit C2	1	TYAEILEPFHPVR	TYAEILEPFHPVR	3	TYAEILEPFHPVR3	87500.5	112362	130115
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	TYAEPLTAAMVEFYTMSQER	TYAEPLTAAMVEFYTMSQER	3	TYAEPLTAAMVEFYTMSQER3	24766	23296.6	24154.3
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	TYAEVDR	TYAEVDR	2	TYAEVDR2	103316	106627	124929
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	TYAGGRLGLFVFSQEMVFFSDMK	TYAGGRLGLFVFSQEMVFFSDMK	3	TYAGGRLGLFVFSQEMVFFSDMK3		2125.08	
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	TYAGLAFHAYGK	TYAGLAFHAYGK	2	TYAGLAFHAYGK2	4901.5		
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	TYAGLAFHAYGK	TYAGLAFHAYGK	3	TYAGLAFHAYGK3	4570.43	8102.87	2476.83
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	TYALASETPATLPK	TYALASETPATLPK	2	TYALASETPATLPK2	24896.5	27300.8	22783.1
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	TYANTEQDLASEDDSK	TYANTEQDLASEDDSK	2	TYANTEQDLASEDDSK2	4672.83	3029.54	6369.87
Q5CZZ9	Q5CZZ9	PI51B_RAT	Pip5k1b	Phosphatidylinositol 4-phosphate 5-kinase type-1 beta	1	TYAPLAFR	TYAPLAFR	2	TYAPLAFR2	21019.7	28459.7	22707.6
Q5I6B8	Q5I6B8;D3ZSI8	PI51C_RAT	Pip5k1c	Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma	0	TYAPVAFR	TYAPVAFR	2	TYAPVAFR2	47828	45217.4	45169
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	TYAQSGNAQAAATCEYPR	TYAQSGNAQAAATC(UniMod:4)EYPR	2	TYAQSGNAQAAATC(UniMod:4)EYPR2	6287.1	5851.54	5278.96
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	TYAQSGNAQAAATCEYPR	TYAQSGNAQAAATC(UniMod:4)EYPR	3	TYAQSGNAQAAATC(UniMod:4)EYPR3			9444.78
Q3ZAU4	Q3ZAU4	Q3ZAU4_RAT	Kazald1	Kazal-type serine peptidase inhibitor domain 1	1	TYAQVCR	TYAQVC(UniMod:4)R	2	TYAQVC(UniMod:4)R2	141793	114363	94108.6
D3ZSN4	D3ZSN4	D3ZSN4_RAT	Zfp330	Zinc finger protein 330	1	TYASGYAHYEEQEN	TYASGYAHYEEQEN	2	TYASGYAHYEEQEN2	3805.49	2912.89	
A0A0G2K6J6	A0A0G2K6J6	A0A0G2K6J6_RAT	Ipo8	Importin 8	1	TYAVGIQQVLLK	TYAVGIQQVLLK	2	TYAVGIQQVLLK2	5061.04	5257.1	3984.49
Q3B7V5	Q3B7V5	Q3B7V5_RAT	Rab2b	RAB2B, member RAS oncogene family	1	TYAYLFK	TYAYLFK	2	TYAYLFK2	19173.5	15583.4	12494.5
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	TYCDLHK	TYC(UniMod:4)DLHK	2	TYC(UniMod:4)DLHK2	176932	171031	
Q6AY17	Q6AY17	AB17B_RAT	Abhd17b	Alpha/beta hydrolase domain-containing protein 17B	1	TYCFDAFPNIDK	TYC(UniMod:4)FDAFPNIDK	2	TYC(UniMod:4)FDAFPNIDK2	8583.37	5434.74	5619.11
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	TYDETYAR	TYDETYAR	2	TYDETYAR2	129778	134292	142246
D3ZP13	D3ZP13	D3ZP13_RAT	Qsox2	Sulfhydryl oxidase	1	TYDIHFYPTFR	TYDIHFYPTFR	3	TYDIHFYPTFR3	51665.6	55918	39175.2
P35281	P35281	RAB10_RAT	Rab10	Ras-related protein Rab-10	1	TYDLLFK	TYDLLFK	1	TYDLLFK1	1997.23	4135.87	1552.81
P35281	P35281	RAB10_RAT	Rab10	Ras-related protein Rab-10	1	TYDLLFK	TYDLLFK	2	TYDLLFK2	88417.9	77029.6	73911.1
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	TYDLPGDFLTQALTQR	TYDLPGDFLTQALTQR	2	TYDLPGDFLTQALTQR2	55624.1	47749	54907.5
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	TYDLPGDFLTQALTQR	TYDLPGDFLTQALTQR	3	TYDLPGDFLTQALTQR3	6491.83	10492.9	18727.6
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	TYDLVAAASK	TYDLVAAASK	2	TYDLVAAASK2	220562	234906	221428
Q6AZ50	Q6AZ50	ATG3_RAT	Atg3	Ubiquitin-like-conjugating enzyme ATG3	1	TYDLYITYDK	TYDLYITYDK	2	TYDLYITYDK2	114180	113396	111937
G3V7W1	G3V7W1	PDCD6_RAT	Pdcd6	Programmed cell death protein 6	1	TYDRDNSGMIDK	TYDRDNSGMIDK	3	TYDRDNSGMIDK3	2297.7	4787.92	
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	TYDSEGIILYAESLDHSNWLLIALREGK	TYDSEGIILYAESLDHSNWLLIALREGK	4	TYDSEGIILYAESLDHSNWLLIALREGK4	3262.97	2688.86	
A0A8I6AVP7	A0A8I6AVP7	A0A8I6AVP7_RAT	Odr4	Protein odr-4 homolog	1	TYDVHDPK	TYDVHDPK	2	TYDVHDPK2		4293.74	
P35280	P70550;P35280	RAB8A_RAT	Rab8a	Ras-related protein Rab-8A	0	TYDYLFK	TYDYLFK	1	TYDYLFK1	5969.03		
P35280	P70550;P35280	RAB8A_RAT	Rab8a	Ras-related protein Rab-8A	0	TYDYLFK	TYDYLFK	2	TYDYLFK2	223227	218763	247615
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	TYEAALETIQNMSK	TYEAALETIQNMSK	2	TYEAALETIQNMSK2	52971	48404.7	62414.7
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	TYEAALETIQNMSK	TYEAALETIQNMSK	3	TYEAALETIQNMSK3	23460.1	21348.4	25704.1
Q04753	Q04753	ICLN_RAT	Clns1a	Methylosome subunit pICln	1	TYEDGMEVETTPTVAGQFEDADVDH	TYEDGMEVETTPTVAGQFEDADVDH	3	TYEDGMEVETTPTVAGQFEDADVDH3	3708.32	3625.42	2960.58
Q4KLJ8	Q4KLJ8	PDCL3_RAT	Pdcl3	Phosducin-like protein 3	1	TYEDMTLEELQENEDEFSEEDER	TYEDMTLEELQENEDEFSEEDER	3	TYEDMTLEELQENEDEFSEEDER3	5373.87	5507.96	5348.29
O35814	O35814	STIP1_RAT	Stip1	Stress-induced-phosphoprotein 1	1	TYEEGLK	TYEEGLK	2	TYEEGLK2	33553.4	25614.3	33060.6
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	TYEEIASLVAEQPK	TYEEIASLVAEQPK	2	TYEEIASLVAEQPK2	20293.5	27163.8	29070.5
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	TYEEIASLVAEQPK	TYEEIASLVAEQPK	3	TYEEIASLVAEQPK3	20727	16995.5	19780.8
Q80Z70	Q80Z70	SE1L1_RAT	Sel1l	Protein sel-1 homolog 1	1	TYEELKR	TYEELKR	2	TYEELKR2	5945.77	4883.8	8871.24
A0A0G2JUC9	A0A0G2JUC9	A0A0G2JUC9_RAT	Herc2	HECT-type E3 ubiquitin transferase	1	TYEEVCEGDVGK	TYEEVC(UniMod:4)EGDVGK	2	TYEEVC(UniMod:4)EGDVGK2	921.223		
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	TYEGSFNALLR	TYEGSFNALLR	2	TYEGSFNALLR2	12660.8	12047.5	6672.94
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	TYEHFNAMGK	TYEHFNAMGK	2	TYEHFNAMGK2	4958.25		
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	TYEHFNAMGK	TYEHFNAMGK	3	TYEHFNAMGK3	31321.1	23034.9	29531.4
D3ZCK4	D3ZCK4	D3ZCK4_RAT	Def6	DEF6 guanine nucleotide exchange factor	1	TYEMSASDTR	TYEMSASDTR	2	TYEMSASDTR2	13725.4	9172.61	8240.7
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	TYEPTNIQGK	TYEPTNIQGK	2	TYEPTNIQGK2	26858.3	29777.5	30506.1
Q5FWS5	Q5FWS5	Q5FWS5_RAT	Loxl1	Lysyl oxidase homolog	1	TYEQGYVYYR	TYEQGYVYYR	2	TYEQGYVYYR2	70739.3	79044.8	91586.1
P24329	P24329	THTR_RAT	Tst	Thiosulfate sulfurtransferase	1	TYEQVLENLQSK	TYEQVLENLQSK	2	TYEQVLENLQSK2	16299.5	15559.3	28707.9
P24329	P24329	THTR_RAT	Tst	Thiosulfate sulfurtransferase	1	TYEQVLENLQSK	TYEQVLENLQSK	3	TYEQVLENLQSK3	6312.02	5064.28	
Q704E8	Q704E8	ABCB7_RAT	Abcb7	Iron-sulfur clusters transporter ABCB7, mitochondrial	1	TYETASLK	TYETASLK	2	TYETASLK2	29723.1	37574	32189.5
D4A3X7	D4A3X7	D4A3X7_RAT	Snx33	Sorting nexin	1	TYETVGEMFAGQPK	TYETVGEMFAGQPK	2	TYETVGEMFAGQPK2	4100.62	8261.39	5921.87
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	TYEVSLR	TYEVSLR	2	TYEVSLR2	91430.3	93546.8	116957
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	TYEVYFTGTSPQNLR	TYEVYFTGTSPQNLR	2	TYEVYFTGTSPQNLR2	17239.9	18789.9	21566
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	TYEVYFTGTSPQNLR	TYEVYFTGTSPQNLR	3	TYEVYFTGTSPQNLR3	9308.9	12553.9	5571.6
D3ZTR1	D3ZTR1	D3ZTR1_RAT	Mrps17	Mitochondrial ribosomal protein S17	1	TYFAHDALQQCSVGDIVLLR	TYFAHDALQQC(UniMod:4)SVGDIVLLR	3	TYFAHDALQQC(UniMod:4)SVGDIVLLR3	4640.61	5808.82	2422.18
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	TYFGAEPQSVNFVEASGQIR	TYFGAEPQSVNFVEASGQIR	3	TYFGAEPQSVNFVEASGQIR3	83984.1	74187.8	83820.5
Q8K3K4	Q8K3K4	SPB10_RAT	Serpinb10	Serpin B10	1	TYFGAEPQSVNFVEASGQIRK	TYFGAEPQSVNFVEASGQIRK	3	TYFGAEPQSVNFVEASGQIRK3	10974.8	10377.6	10863.8
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	TYFNILIKPETLAK	TYFNILIKPETLAK	3	TYFNILIKPETLAK3	30386.2	25016.3	23782.9
P52759	P52759	RIDA_RAT	Rida	2-iminobutanoate/2-iminopropanoate deaminase	1	TYFQGNLPAR	TYFQGNLPAR	2	TYFQGNLPAR2	21330	24012.2	25488.1
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	TYFSCTSAHTSTGDGTAMVTR	TYFSC(UniMod:4)TSAHTSTGDGTAMVTR	3	TYFSC(UniMod:4)TSAHTSTGDGTAMVTR3	80775	129045	101886
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	TYFSEEDVR	TYFSEEDVR	2	TYFSEEDVR2	185752	211425	216478
P01946	P01946	HBA_RAT	Hba1	Hemoglobin subunit alpha-1/2	1	TYFSHIDVSPGSAQVK	TYFSHIDVSPGSAQVK	2	TYFSHIDVSPGSAQVK2	173769	117507	109297
P01946	P01946	HBA_RAT	Hba1	Hemoglobin subunit alpha-1/2	1	TYFSHIDVSPGSAQVK	TYFSHIDVSPGSAQVK	3	TYFSHIDVSPGSAQVK3	2.27967e+06	2.41957e+06	2.83183e+06
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	TYGAEFVYSEHAK	TYGAEFVYSEHAK	3	TYGAEFVYSEHAK3	12311.2	8838.26	12561.6
Q3B7D2	Q3B7D2	SPTC2_RAT	Sptlc2	Serine palmitoyltransferase 2	1	TYGAGVCSTR	TYGAGVC(UniMod:4)STR	2	TYGAGVC(UniMod:4)STR2	7475.64	10982.9	12062.3
Q63190	Q63190	EMD_RAT	Emd	Emerin	1	TYGEPESVGMSK	TYGEPESVGMSK	2	TYGEPESVGMSK2	61946.4	50987.2	61372.6
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	TYGESMLYLDGQR	TYGESMLYLDGQR	2	TYGESMLYLDGQR2	13861.9	15417.6	12592
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	TYGFHFTIPALVVEK	TYGFHFTIPALVVEK	2	TYGFHFTIPALVVEK2	4266.55	2696.96	
Q62698	Q62698	DC1L2_RAT	Dync1li2	Cytoplasmic dynein 1 light intermediate chain 2	1	TYGFHFTIPALVVEK	TYGFHFTIPALVVEK	3	TYGFHFTIPALVVEK3	30239.6	28455.1	29752.1
P83941	P83941;A0A8I6AKW3	ELOC_RAT	Eloc	Elongin-C	0	TYGGCEGPDAMYVK	TYGGC(UniMod:4)EGPDAMYVK	2	TYGGC(UniMod:4)EGPDAMYVK2	122263	99050.9	130834
Q642B0	Q642B0	Q642B0_RAT	Gpc4	Glypican 4	1	TYGHLYMQNSELFK	TYGHLYMQNSELFK	3	TYGHLYMQNSELFK3	12721.1	7270.17	14259.6
P05765	P05765;D3ZSE0	RS21_RAT	Rps21	Small ribosomal subunit protein eS21	0	TYGICGAIR	TYGIC(UniMod:4)GAIR	2	TYGIC(UniMod:4)GAIR2	80307.9	96107.9	88347.3
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	TYGQSTYSR	TYGQSTYSR	2	TYGQSTYSR2	210854	212527	228321
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	TYGVRPSSETYDVYCYVDK	TYGVRPSSETYDVYC(UniMod:4)YVDK	3	TYGVRPSSETYDVYC(UniMod:4)YVDK3	75721.3	64468.6	63127.1
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	TYGVSFFLVK	TYGVSFFLVK	2	TYGVSFFLVK2	2.34888e+06	2.29386e+06	2.25736e+06
D3ZR49	D3ZR49	D3ZR49_RAT	Man1a2	alpha-1,2-Mannosidase	1	TYGWGHNELRPIAR	TYGWGHNELRPIAR	4	TYGWGHNELRPIAR4	11302.3	18164.2	10981.5
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	TYHALSNLPK	TYHALSNLPK	2	TYHALSNLPK2	16991.5	10599	11408.6
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	TYHALSNLPK	TYHALSNLPK	3	TYHALSNLPK3	59997.1	53503.2	66786.8
P32038	P32038	CFAD_RAT	Cfd	Complement factor D	1	TYHDGAITK	TYHDGAITK	2	TYHDGAITK2	65937.2		63801.6
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	TYHMYHAESISAESK	TYHMYHAESISAESK	2	TYHMYHAESISAESK2	1431.23		
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	TYHMYHAESISAESK	TYHMYHAESISAESK	3	TYHMYHAESISAESK3	15512	4845.8	10652.1
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	TYHMYHAESISAESK	TYHMYHAESISAESK	4	TYHMYHAESISAESK4	54060.4	42711.5	39420.2
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	TYHMYNADSISAQSK	TYHMYNADSISAQSK	2	TYHMYNADSISAQSK2	2000.3		1361.7
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	TYHMYNADSISAQSK	TYHMYNADSISAQSK	3	TYHMYNADSISAQSK3	32132.4	23000.2	32580.1
A0A8I5Y6A1	A0A8I5Y6A1	A0A8I5Y6A1_RAT	Ablim1	Actin-binding LIM protein 1	1	TYHPNCFACTICK	TYHPNC(UniMod:4)FAC(UniMod:4)TIC(UniMod:4)K	3	TYHPNC(UniMod:4)FAC(UniMod:4)TIC(UniMod:4)K3	3242.44	2647.47	
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TYHVGEQWQK	TYHVGEQWQK	2	TYHVGEQWQK2	7.67847e+06	7.43272e+06	6.78087e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TYHVGEQWQK	TYHVGEQWQK	3	TYHVGEQWQK3	2.0875e+07	2.31178e+07	2.15046e+07
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TYHVGEQWQKEYLGAICSCTCFGGQR	TYHVGEQWQKEYLGAIC(UniMod:4)SC(UniMod:4)TC(UniMod:4)FGGQR	4	TYHVGEQWQKEYLGAIC(UniMod:4)SC(UniMod:4)TC(UniMod:4)FGGQR4	21248.6	14496.1	19907.2
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	TYHVYHLESMNAETK	TYHVYHLESMNAETK	3	TYHVYHLESMNAETK3	11599.8		11958.6
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	TYHVYHLESMNAETK	TYHVYHLESMNAETK	4	TYHVYHLESMNAETK4	14027.8	17815.7	18313.8
D3ZQV8	D3ZQV8	D3ZQV8_RAT	Phf6	PHD finger protein 6	1	TYHYHCALHDK	TYHYHC(UniMod:4)ALHDK	2	TYHYHC(UniMod:4)ALHDK2	3743.73		3265.61
D3ZQV8	D3ZQV8	D3ZQV8_RAT	Phf6	PHD finger protein 6	1	TYHYHCGVQDK	TYHYHC(UniMod:4)GVQDK	2	TYHYHC(UniMod:4)GVQDK2	1357.4		
D3ZQV8	D3ZQV8	D3ZQV8_RAT	Phf6	PHD finger protein 6	1	TYHYHCGVQDK	TYHYHC(UniMod:4)GVQDK	3	TYHYHC(UniMod:4)GVQDK3	5703.56		
Q6P6G5	Q6P6G5	YIPF1_RAT	Yipf1	Protein YIPF1	1	TYHYVPEFQK	TYHYVPEFQK	3	TYHYVPEFQK3	6935.12	2939.37	3332.76
P33436	P33436	MMP2_RAT	Mmp2	72 kDa type IV collagenase	1	TYIFSGDK	TYIFSGDK	2	TYIFSGDK2	24900.1	13017.8	14241.2
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	TYIGGMPCELLIPHSDDLYGLK	TYIGGMPC(UniMod:4)ELLIPHSDDLYGLK	3	TYIGGMPC(UniMod:4)ELLIPHSDDLYGLK3	142643	136325	135507
P00173	P00173	CYB5_RAT	Cyb5a	Cytochrome b5	1	TYIIGELHPDDR	TYIIGELHPDDR	2	TYIIGELHPDDR2	36177.7	39979.2	29964.1
P00173	P00173	CYB5_RAT	Cyb5a	Cytochrome b5	1	TYIIGELHPDDR	TYIIGELHPDDR	3	TYIIGELHPDDR3	334895	354692	339775
B2GV54	B2GV54	NCEH1_RAT	Nceh1	Neutral cholesterol ester hydrolase 1	1	TYILTCEHDVLR	TYILTC(UniMod:4)EHDVLR	3	TYILTC(UniMod:4)EHDVLR3	42764.4	33900.6	29582.8
B2GV54	B2GV54	NCEH1_RAT	Nceh1	Neutral cholesterol ester hydrolase 1	1	TYILTCEHDVLRDDGIMYAK	TYILTC(UniMod:4)EHDVLRDDGIMYAK	3	TYILTC(UniMod:4)EHDVLRDDGIMYAK3	38446.1	37555.7	43697.3
B2GV54	B2GV54	NCEH1_RAT	Nceh1	Neutral cholesterol ester hydrolase 1	1	TYILTCEHDVLRDDGIMYAK	TYILTC(UniMod:4)EHDVLRDDGIMYAK	4	TYILTC(UniMod:4)EHDVLRDDGIMYAK4	37392.2	33729.2	26826.3
D3ZW15	D3ZW15	D3ZW15_RAT	Sec24b	SEC24 homolog B, COPII coat complex component	1	TYINPFVSFIDQR	TYINPFVSFIDQR	2	TYINPFVSFIDQR2	6289.4	9947.16	12720.7
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	TYIQCIAAISR	TYIQC(UniMod:4)IAAISR	2	TYIQC(UniMod:4)IAAISR2		108873	
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	TYIWQIPER	TYIWQIPER	2	TYIWQIPER2	3.82977e+06	2.61657e+06	2.43734e+06
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	TYIWQIPER	TYIWQIPER	3	TYIWQIPER3	81749.7	60236	53737.9
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	TYLDMNR	TYLDMNR	2	TYLDMNR2			17251.5
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	TYLDSNR	TYLDSNR	2	TYLDSNR2	57671.8	50110	65271.8
Q07969	Q07969	CD36_RAT	Cd36	Platelet glycoprotein 4	1	TYLDVEPITGFTLQFAK	TYLDVEPITGFTLQFAK	2	TYLDVEPITGFTLQFAK2	4765.87		6727.31
G3V7N6	G3V7N6	G3V7N6_RAT	Mboat7	Membrane bound O-acyltransferase domain containing 7-like 1	1	TYLDWLEQPFPEAVPSLRPLLR	TYLDWLEQPFPEAVPSLRPLLR	3	TYLDWLEQPFPEAVPSLRPLLR3	33623.9	35295.4	27456.5
P42335	P17105;P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	0	TYLEEELTK	TYLEEELTK	2	TYLEEELTK2	96210.7	103090	96137.1
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	TYLFKGSQYWRFEDGVLDPDYPR	TYLFKGSQYWRFEDGVLDPDYPR	4	TYLFKGSQYWRFEDGVLDPDYPR4	32774.6	23579	27907
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TYLGNALVCTCYGGSR	TYLGNALVC(UniMod:4)TC(UniMod:4)YGGSR	2	TYLGNALVC(UniMod:4)TC(UniMod:4)YGGSR2	105116	192172	95965.2
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	TYLGNALVCTCYGGSR	TYLGNALVC(UniMod:4)TC(UniMod:4)YGGSR	3	TYLGNALVC(UniMod:4)TC(UniMod:4)YGGSR3	6.68154e+06	7.87831e+06	8.04104e+06
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	TYLGPQYLTLMDNFR	TYLGPQYLTLMDNFR	2	TYLGPQYLTLMDNFR2	35387.3	34260.2	41759.9
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	TYLGPQYLTLMDNFR	TYLGPQYLTLMDNFR	3	TYLGPQYLTLMDNFR3	19607.6	19666	24922.7
A0A0G2K9Z5	A0A0G2K9Z5	A0A0G2K9Z5_RAT	AABR07060971.1	Ig-like domain-containing protein	1	TYLHWLLQSPGQSPK	TYLHWLLQSPGQSPK	2	TYLHWLLQSPGQSPK2	3384.05	2904.55	3069.43
A0A0G2K9Z5	A0A0G2K9Z5	A0A0G2K9Z5_RAT	AABR07060971.1	Ig-like domain-containing protein	1	TYLHWLLQSPGQSPK	TYLHWLLQSPGQSPK	3	TYLHWLLQSPGQSPK3	59249.7	49235.9	52931.8
P54645	P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	1	TYLLDFR	TYLLDFR	2	TYLLDFR2	53565	54083.2	55048.4
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	TYLLDGSCMVEESGTLESQLEATK	TYLLDGSC(UniMod:4)MVEESGTLESQLEATK	3	TYLLDGSC(UniMod:4)MVEESGTLESQLEATK3	36433.4	41228.8	45171.8
Q8VHQ7	A0A8I6AM63;Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	0	TYLLPDK	TYLLPDK	1	TYLLPDK1	78401.6	62934.1	72674
Q8VHQ7	A0A8I6AM63;Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	0	TYLLPDK	TYLLPDK	2	TYLLPDK2	1.09866e+06	1.09983e+06	1.19982e+06
D3ZQI6	D3ZQI6	D3ZQI6_RAT	Xpo4	Exportin 4	1	TYLLVDEK	TYLLVDEK	2	TYLLVDEK2	18314.1	14899.9	11055.2
Q62632	Q62632	FSTL1_RAT	Fstl1	Follistatin-related protein 1	1	TYLNHCELHR	TYLNHC(UniMod:4)ELHR	3	TYLNHC(UniMod:4)ELHR3	76335.5	41736.1	49578.8
A0A0G2JY98	A0A0G2JY98	A0A0G2JY98_RAT	ENSRNOG00000067883	Ig-like domain-containing protein	1	TYLNWLLQNPGQSPK	TYLNWLLQNPGQSPK	2	TYLNWLLQNPGQSPK2	21207.8	10139.6	15759.4
A0A0G2JY98	A0A0G2JY98	A0A0G2JY98_RAT	ENSRNOG00000067883	Ig-like domain-containing protein	1	TYLNWLLQNPGQSPK	TYLNWLLQNPGQSPK	3	TYLNWLLQNPGQSPK3	27396.2	24978.1	
A0A8I5ZY02	A0A8I5ZY02	A0A8I5ZY02_RAT	ENSRNOG00000070192	Ig-like domain-containing protein	1	TYLNWLLQR	TYLNWLLQR	2	TYLNWLLQR2	12950	11044.9	8555.72
A0A8I5ZY02	A0A8I5ZY02	A0A8I5ZY02_RAT	ENSRNOG00000070192	Ig-like domain-containing protein	1	TYLNWLLQRPGQSPK	TYLNWLLQRPGQSPK	2	TYLNWLLQRPGQSPK2	2067.74		3937.29
A0A8I5ZY02	A0A8I5ZY02	A0A8I5ZY02_RAT	ENSRNOG00000070192	Ig-like domain-containing protein	1	TYLNWLLQRPGQSPK	TYLNWLLQRPGQSPK	3	TYLNWLLQRPGQSPK3	64399.4	59250.2	64295.3
A0A8I6G3M2	A0A8I6G3M2	A0A8I6G3M2_RAT	ENSRNOG00000068055	Ig-like domain-containing protein	1	TYLNWYLQR	TYLNWYLQR	2	TYLNWYLQR2	188445	149529	154747
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	TYLPSQVSR	TYLPSQVSR	2	TYLPSQVSR2	485572	472641	588326
Q641Y2	Q641Y2	NDUS2_RAT	Ndufs2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	1	TYLQALPYFDR	TYLQALPYFDR	2	TYLQALPYFDR2	94339.2	86991.1	77320.2
F1M5M9	F1M287;F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	0	TYLSAEYNLETSR	TYLSAEYNLETSR	2	TYLSAEYNLETSR2	5337.55	4701.17	6443.73
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	TYLSAEYNLETSRHEGLDIIENAVDNLDSR	TYLSAEYNLETSRHEGLDIIENAVDNLDSR	4	TYLSAEYNLETSRHEGLDIIENAVDNLDSR4	11392.8	8760.25	6291.45
A0A8I5ZTK7	A0A8I5ZTK7	A0A8I5ZTK7_RAT	ENSRNOG00000069828	Ig-like domain-containing protein	1	TYLSWILQR	TYLSWILQR	2	TYLSWILQR2	7290.14	11431.1	10699.1
A0A8I5ZTK7	A0A8I5ZTK7	A0A8I5ZTK7_RAT	ENSRNOG00000069828	Ig-like domain-containing protein	1	TYLSWILQRPGQSPK	TYLSWILQRPGQSPK	3	TYLSWILQRPGQSPK3	38189.5	32305.9	27104.7
G3V8D4	G3V8D4	APOC2_RAT	Apoc2	Apolipoprotein C-II	1	TYLTSVDEK	TYLTSVDEK	2	TYLTSVDEK2	8.26219e+07	9.68659e+07	9.66518e+07
G3V8D4	G3V8D4	APOC2_RAT	Apoc2	Apolipoprotein C-II	1	TYLTSVDEKLR	TYLTSVDEKLR	2	TYLTSVDEKLR2	135561	148029	136722
G3V8D4	G3V8D4	APOC2_RAT	Apoc2	Apolipoprotein C-II	1	TYLTSVDEKLR	TYLTSVDEKLR	3	TYLTSVDEKLR3	740657	1.09184e+06	912905
G3V8D4	G3V8D4	APOC2_RAT	Apoc2	Apolipoprotein C-II	1	TYLTSVDEKLRDMYSK	TYLTSVDEKLRDMYSK	2	TYLTSVDEKLRDMYSK2	3148.86	2541.91	1835.34
G3V8D4	G3V8D4	APOC2_RAT	Apoc2	Apolipoprotein C-II	1	TYLTSVDEKLRDMYSK	TYLTSVDEKLRDMYSK	3	TYLTSVDEKLRDMYSK3	335973	331033	403663
G3V8D4	G3V8D4	APOC2_RAT	Apoc2	Apolipoprotein C-II	1	TYLTSVDEKLRDMYSK	TYLTSVDEKLRDMYSK	4	TYLTSVDEKLRDMYSK4	343575	443359	466509
P24473	P24473	GSTK1_RAT	Gstk1	Glutathione S-transferase kappa 1	1	TYMLFGSDR	TYMLFGSDR	2	TYMLFGSDR2	94085.1	103182	91912.2
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	TYMNQLAMNSPEMSECDILHTLR	TYMNQLAMNSPEMSEC(UniMod:4)DILHTLR	3	TYMNQLAMNSPEMSEC(UniMod:4)DILHTLR3	13794.6	18917.8	23541.7
A0A8I6A9E8	A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	1	TYNIILR	TYNIILR	2	TYNIILR2	48293	33389.2	31657.8
Q3B7D5	Q3B7D5	RASF2_RAT	Rassf2	Ras association domain-containing protein 2	1	TYNLYYEGQNLQLR	TYNLYYEGQNLQLR	2	TYNLYYEGQNLQLR2	3744.99	1827.7	5493.45
P80385	P80385	AAKG1_RAT	Prkag1	5'-AMP-activated protein kinase subunit gamma-1	1	TYNNLDVSVTK	TYNNLDVSVTK	2	TYNNLDVSVTK2	32431.3	36643.8	30091.6
A0A0G2K542	A0A0G2K542	A0A0G2K542_RAT	Ugp2	UTP--glucose-1-phosphate uridylyltransferase	1	TYNTDVPLVLMNSFNTDEDTKK	TYNTDVPLVLMNSFNTDEDTKK	3	TYNTDVPLVLMNSFNTDEDTKK3	15621.6	18793.1	11115.8
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	TYNVLDMK	TYNVLDMK	2	TYNVLDMK2	45636.7	53439.1	48203.3
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	TYPALETLTEPHQLTATLNCVIGVAR	TYPALETLTEPHQLTATLNC(UniMod:4)VIGVAR	3	TYPALETLTEPHQLTATLNC(UniMod:4)VIGVAR3	5858.2	7244.67	5224.47
Q6IRK9	Q6IRK9	CBPQ_RAT	Cpq	Carboxypeptidase Q	1	TYPDTDSFNTVAEITGSK	TYPDTDSFNTVAEITGSK	2	TYPDTDSFNTVAEITGSK2	20076.9	10528.6	12476.4
Q9QYL8	Q9QYL8	LYPA2_RAT	Lypla2	Acyl-protein thioesterase 2	1	TYPGVMHSSCPQEMAAVK	TYPGVMHSSC(UniMod:4)PQEMAAVK	3	TYPGVMHSSC(UniMod:4)PQEMAAVK3	32792.8	38648.3	25310.1
A0A8I6A371	A0A8I6A371	A0A8I6A371_RAT	Nmi	N-myc (and STAT) interactor	1	TYPLYMNQK	TYPLYMNQK	2	TYPLYMNQK2	70611.3	77117.7	53008.9
A0A8I6ABJ7	A0A8I6ABJ7	A0A8I6ABJ7_RAT	Rel	REL proto-oncogene, NF-kB subunit	1	TYPSIQIMNYYGK	TYPSIQIMNYYGK	2	TYPSIQIMNYYGK2	6650.29	7503.82	3845.76
Q7TQ20	Q7TQ20	DNJC2_RAT	Dnajc2	DnaJ homolog subfamily C member 2	1	TYPVNTPER	TYPVNTPER	2	TYPVNTPER2	15598	14050.3	
D4ABB8	D4ABB8	ATP9B_RAT	Atp9b	Probable phospholipid-transporting ATPase IIB	1	TYQASSPDEVALVR	TYQASSPDEVALVR	2	TYQASSPDEVALVR2	2479.56	3717.79	
D4A4T9	D4A4T9	CHRD1_RAT	Chordc1	Cysteine and histidine-rich domain-containing protein 1	1	TYQGLQSLEEVCVYHSGVPIFHEGMK	TYQGLQSLEEVC(UniMod:4)VYHSGVPIFHEGMK	4	TYQGLQSLEEVC(UniMod:4)VYHSGVPIFHEGMK4			2821.39
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	TYQHDLALLR	TYQHDLALLR	2	TYQHDLALLR2	22096.8	24507.3	24025.9
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	TYQHDLALLR	TYQHDLALLR	3	TYQHDLALLR3	314402	296621	315871
B2GV39	B2GV39	B2GV39_RAT	Mgat4b	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B	1	TYQHFTLEK	TYQHFTLEK	3	TYQHFTLEK3	1.03143e+06		1.15974e+06
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	TYQIMWANNGDSISR	TYQIMWANNGDSISR	2	TYQIMWANNGDSISR2	26521.5	33408	24181.7
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	TYQMLYLLLK	TYQMLYLLLK	2	TYQMLYLLLK2	4762.91	3099.85	3326.68
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	TYQSITER	TYQSITER	2	TYQSITER2	71281	91119.3	75569.1
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	TYQTEVDK	TYQTEVDK	2	TYQTEVDK2	69761.2	68274.4	67708.2
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	TYQTEVDKLR	TYQTEVDKLR	2	TYQTEVDKLR2	18431.5	17960.3	18122.4
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	TYQTEVDKLR	TYQTEVDKLR	3	TYQTEVDKLR3	214893	263055	245702
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	TYQVAHMK	TYQVAHMK	2	TYQVAHMK2	10001.5	9542.11	8982
P38062	P38062	MAP2_RAT	Metap2	Methionine aminopeptidase 2	1	TYQVKPIR	TYQVKPIR	2	TYQVKPIR2	3470.02		
O88563	O88563	MRP3_RAT	Abcc3	ATP-binding cassette sub-family C member 3	1	TYQVQQMK	TYQVQQMK	2	TYQVQQMK2		3742.39	3071.14
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	TYRPFAAVMTTLCNCK	TYRPFAAVMTTLC(UniMod:4)NC(UniMod:4)K	3	TYRPFAAVMTTLC(UniMod:4)NC(UniMod:4)K3	1617.86	4741.6	1136.9
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	TYRQEFDDAQGK	TYRQEFDDAQGK	2	TYRQEFDDAQGK2	3897.22	6131.78	4825.95
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	TYRQEFDDAQGK	TYRQEFDDAQGK	3	TYRQEFDDAQGK3	59633.8	67462.1	99685.2
D3ZHZ3	D3ZHZ3	D3ZHZ3_RAT	Osbpl3	Oxysterol-binding protein	1	TYSAPAINAIQGGAFESPK	TYSAPAINAIQGGAFESPK	2	TYSAPAINAIQGGAFESPK2	3802.22	1427.29	2262.53
Q5PQL5	Q5PQL5	PTSS1_RAT	Ptdss1	Phosphatidylserine synthase 1	1	TYSECEDGTYSPEISWYHGK	TYSEC(UniMod:4)EDGTYSPEISWYHGK	3	TYSEC(UniMod:4)EDGTYSPEISWYHGK3	16611.8	9796.03	15191.8
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	TYSEFCSR	TYSEFC(UniMod:4)SR	2	TYSEFC(UniMod:4)SR2	132478	187060	132174
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	TYSFEVDLK	TYSFEVDLK	2	TYSFEVDLK2	50676.5	82654.2	41546.3
Q76LD0	Q76LD0	CRDL1_RAT	Chrdl1	Chordin-like protein 1	1	TYSHGESWHPNLR	TYSHGESWHPNLR	3	TYSHGESWHPNLR3	58806.8	62955.1	59316.6
Q76LD0	Q76LD0	CRDL1_RAT	Chrdl1	Chordin-like protein 1	1	TYSHGESWHPNLR	TYSHGESWHPNLR	4	TYSHGESWHPNLR4	165927	161649	176671
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	TYSKPISGSVR	TYSKPISGSVR	3	TYSKPISGSVR3	15347.9	17143	23954
A0A8I6A0B7	A0A8I6A0B7	A0A8I6A0B7_RAT	Nipsnap3a	Nipsnap homolog 3B	1	TYSLKPSK	TYSLKPSK	2	TYSLKPSK2	50623.3	27666.3	45744.4
B5DF93	B5DF93	PATL1_RAT	Patl1	Protein PAT1 homolog 1	1	TYSLLLDVEDYERR	TYSLLLDVEDYERR	3	TYSLLLDVEDYERR3	11322.2		
Q5BJT7	Q5BJT7	CCD93_RAT	Ccdc93	Coiled-coil domain-containing protein 93	1	TYSLPEDDDFIK	TYSLPEDDDFIK	2	TYSLPEDDDFIK2	14512.7	16579.5	19016.1
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	TYSLWSNLWK	TYSLWSNLWK	2	TYSLWSNLWK2	88358	90990.4	80086.6
Q9QZR8	Q9QZR8	PDZD2_RAT	Pdzd2	PDZ domain-containing protein 2	1	TYSMPAQFSSHFGR	TYSMPAQFSSHFGR	3	TYSMPAQFSSHFGR3		4301.42	5209.53
A0A8I6ANI3	A0A8I6ANI3	A0A8I6ANI3_RAT	Ctla2a	Cytotoxic T lymphocyte-associated protein 2 alpha	1	TYSPDEER	TYSPDEER	2	TYSPDEER2		289285	
Q5PQN6	Q5PQN6	SPE39_RAT	Vipas39	Spermatogenesis-defective protein 39 homolog	1	TYSPELGRPK	TYSPELGRPK	3	TYSPELGRPK3	27274.9	19073.2	23417.1
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	TYSPGLR	TYSPGLR	2	TYSPGLR2	14541.3	19844	15484
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	TYSTDWHVVNYK	TYSTDWHVVNYK	3	TYSTDWHVVNYK3	15459	15513.2	14645.4
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	TYSVALER	TYSVALER	2	TYSVALER2	352132	158438	452703
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	TYSVEYLDDNK	TYSVEYLDDNK	2	TYSVEYLDDNK2	2.01774e+06	1.92913e+06	2.12196e+06
P18424	P18424	LCAT_RAT	Lcat	Phosphatidylcholine-sterol acyltransferase	1	TYSVEYLDDNK	TYSVEYLDDNK	3	TYSVEYLDDNK3	8834.21	11736.9	11679
Q63942	Q63941;Q63942	RAB3D_RAT	Rab3d	GTP-binding protein Rab-3D	0	TYSWDNAQVILVGNK	TYSWDNAQVILVGNK	2	TYSWDNAQVILVGNK2	53601.7	51503.2	61143.6
Q63942	Q63941;Q63942	RAB3D_RAT	Rab3d	GTP-binding protein Rab-3D	0	TYSWDNAQVILVGNK	TYSWDNAQVILVGNK	3	TYSWDNAQVILVGNK3	22816.1	19926.4	17479.3
P63012	P63012	RAB3A_RAT	Rab3a	Ras-related protein Rab-3A	1	TYSWDNAQVLLVGNK	TYSWDNAQVLLVGNK	2	TYSWDNAQVLLVGNK2		52788.5	61342.6
P27952	A0A0G2K8H4;A0A0U1RVI9;D3ZIY7;D3ZT78;A0A8I6ADQ7;P27952;A0A8J8XHT4;D3ZQW7	RS2_RAT	Rps2	Small ribosomal subunit protein uS5	0	TYSYLTPDLWK	TYSYLTPDLWK	2	TYSYLTPDLWK2	61651.7	67472.5	64876.8
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	TYTEEELSAK	TYTEEELSAK	2	TYTEEELSAK2	13590.2	16282.2	13316.5
Q68FT7	Q68FT7	Q68FT7_RAT	Farsb	Phenylalanine--tRNA ligase beta subunit	1	TYTIANQFPLNK	TYTIANQFPLNK	2	TYTIANQFPLNK2	15134.4	8093.25	10691.7
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	TYTIYQELEK	TYTIYQELEK	2	TYTIYQELEK2	9273.52	5675.56	14042.3
P14740	P14740	DPP4_RAT	Dpp4	Dipeptidyl peptidase 4	1	TYTLADYLK	TYTLADYLK	2	TYTLADYLK2	2735.02		5535.52
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	TYTMEGVR	TYTMEGVR	2	TYTMEGVR2	32563	30227.2	29683.5
Q9QZK5	Q9QZK5	HTRA1_RAT	Htra1	Serine protease HTRA1	1	TYTNLCQLR	TYTNLC(UniMod:4)QLR	2	TYTNLC(UniMod:4)QLR2	27500.4	29173.8	21713.2
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	TYTPIPSVQLMGAGFHFLAGEPR	TYTPIPSVQLMGAGFHFLAGEPR	3	TYTPIPSVQLMGAGFHFLAGEPR3	92463.1	75824.3	113497
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	TYTSQSIHQAVIAEQLAK	TYTSQSIHQAVIAEQLAK	3	TYTSQSIHQAVIAEQLAK3	32009.2	48341.5	26075
Q6AY72	Q6AY72	CS025_RAT		UPF0449 protein C19orf25 homolog	1	TYVAMNER	TYVAMNER	2	TYVAMNER2	9291.1	12179	23450.8
F1LWX9	F1LWX9	F1LWX9_RAT	Tmem117	Transmembrane protein 117	1	TYVEGDMFLHSR	TYVEGDMFLHSR	2	TYVEGDMFLHSR2			5365.02
F1LWX9	F1LWX9	F1LWX9_RAT	Tmem117	Transmembrane protein 117	1	TYVEGDMFLHSR	TYVEGDMFLHSR	3	TYVEGDMFLHSR3	18635.6	16027.7	18105.6
F7ETN7	F7ETN7	F7ETN7_RAT	B4galt7	Beta-1,4-galactosyltransferase	1	TYVGGILLLSK	TYVGGILLLSK	2	TYVGGILLLSK2	12464.2	10612.6	10334.8
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	TYVGPMTEHLFPGYHTK	TYVGPMTEHLFPGYHTK	3	TYVGPMTEHLFPGYHTK3	7203.44	9883.56	15924.5
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	TYVGPMTEHLFPGYHTK	TYVGPMTEHLFPGYHTK	4	TYVGPMTEHLFPGYHTK4	17308.5	15372.1	25204.4
A0A8I6GJ42	A0A8I6GJ42	A0A8I6GJ42_RAT	Helz	Helicase with zinc finger	1	TYVLNPLAPEFIPR	TYVLNPLAPEFIPR	2	TYVLNPLAPEFIPR2	5274.48	3924.58	8550.97
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	TYVPDGFGDIVDALSDPKK	TYVPDGFGDIVDALSDPKK	3	TYVPDGFGDIVDALSDPKK3	14430.3	16591.6	13702.4
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	TYVPNTK	TYVPNTK	2	TYVPNTK2	92569.4	109867	118415
Q9WVS2	Q9WVS2	OSGEP_RAT	Osgep	tRNA N6-adenosine threonylcarbamoyltransferase	1	TYVTAPGTGFLPGDTAR	TYVTAPGTGFLPGDTAR	2	TYVTAPGTGFLPGDTAR2			2414.31
A0A8I6A8Q1	A0A8I6A8Q1	A0A8I6A8Q1_RAT	A2ml1	Alpha-2-macroglobulin-like 1	1	TYVWTVTPK	TYVWTVTPK	2	TYVWTVTPK2	23364.2	14315.6	30093.5
A0A0G2K6C7	A0A0G2K6C7	A0A0G2K6C7_RAT	Trim5	Tripartite motif-containing 5	1	TYWQNQIQK	TYWQNQIQK	2	TYWQNQIQK2	39098.3	31015.9	34464.1
P49432	P49432	ODPB_RAT	Pdhb	Pyruvate dehydrogenase E1 component subunit beta, mitochondrial	1	TYYMSAGLQPVPIVFR	TYYMSAGLQPVPIVFR	2	TYYMSAGLQPVPIVFR2	57765.7	66955.7	70924.1
P49432	P49432	ODPB_RAT	Pdhb	Pyruvate dehydrogenase E1 component subunit beta, mitochondrial	1	TYYMSAGLQPVPIVFR	TYYMSAGLQPVPIVFR	3	TYYMSAGLQPVPIVFR3	18827.3	18599.7	21352.1
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	TYYVNHESR	TYYVNHESR	2	TYYVNHESR2	74782.5	113832	73855.8
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	TYYVNHESR	TYYVNHESR	3	TYYVNHESR3	396212	499741	575685
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	VAAADEK	VAAADEK	1	VAAADEK1			7012.91
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	VAAAESMPLLLECAR	VAAAESMPLLLEC(UniMod:4)AR	2	VAAAESMPLLLEC(UniMod:4)AR2	176429	180622	185230
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	VAAAESMPLLLECAR	VAAAESMPLLLEC(UniMod:4)AR	3	VAAAESMPLLLEC(UniMod:4)AR3	10902.4	10488.4	20334.7
G3V7L1	G3V7L1;P11530	UTRN_RAT	Utrn	Utrophin	0	VAAAETAK	VAAAETAK	1	VAAAETAK1			7659.43
G3V7L1	G3V7L1;P11530	UTRN_RAT	Utrn	Utrophin	0	VAAAETAK	VAAAETAK	2	VAAAETAK2	4816.93		19375
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	VAAAFPGDVDR	VAAAFPGDVDR	2	VAAAFPGDVDR2	28500.3	21407.5	17978.7
D3Z8Q7	D3Z8Q7	D3Z8Q7_RAT	Ciao2b	Cytosolic iron-sulfur assembly component 2B	1	VAAALENTHLLEVVNQCLSAR	VAAALENTHLLEVVNQC(UniMod:4)LSAR	3	VAAALENTHLLEVVNQC(UniMod:4)LSAR3	5962.28	7288.09	5937.84
Q9WVB1	Q9WVB1	RAB6A_RAT	Rab6a	Ras-related protein Rab-6A	1	VAAALPGMESTQDR	VAAALPGMESTQDR	2	VAAALPGMESTQDR2	1.93961e+06	1.9082e+06	2.03581e+06
Q9WVB1	Q9WVB1	RAB6A_RAT	Rab6a	Ras-related protein Rab-6A	1	VAAALPGMESTQDR	VAAALPGMESTQDR	3	VAAALPGMESTQDR3	13033.5	22986.1	12678.2
Q5RJS3	Q5RJS3	Q5RJS3_RAT	Ciao2a	Cytosolic iron-sulfur assembly component 2A	1	VAAAMENPNLR	VAAAMENPNLR	2	VAAAMENPNLR2	105982	100952	110508
D4A9P0	D4A9P0	D4A9P0_RAT	Kif7	Kinesin family member 7	1	VAAAQSQVQVLR	VAAAQSQVQVLR	2	VAAAQSQVQVLR2	2755.31		
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	VAAAVDLITR	VAAAVDLITR	2	VAAAVDLITR2	35680.3	34198.8	26860.3
A0JPP1	A0JPP1	NC2A_RAT	Drap1	Dr1-associated corepressor	1	VAAAVPVIISR	VAAAVPVIISR	2	VAAAVPVIISR2	7285.9	10999.2	12676.1
Q56AP7	Q56AP7	CRBN_RAT	Crbn	Protein cereblon	1	VAACLPIDDVLR	VAAC(UniMod:4)LPIDDVLR	2	VAAC(UniMod:4)LPIDDVLR2	37044.9	30759.6	25188.6
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	VAADGESREESLIQESASK	VAADGESREESLIQESASK	3	VAADGESREESLIQESASK3	42563	35689.5	44977.3
D3ZLM5	D3ZLM5	D3ZLM5_RAT	Nhlrc2	NHL repeat containing 2	1	VAADPTTGR	VAADPTTGR	2	VAADPTTGR2	15413.5	8825.06	10354.3
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	VAADTFTALK	VAADTFTALK	2	VAADTFTALK2	42514.9	50380.8	34364.8
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	VAAEFSSR	VAAEFSSR	2	VAAEFSSR2	23401.1	25951.2	33003.3
P51158	P51158	RAB28_RAT	Rab28	Ras-related protein Rab-28	1	VAAEILGIK	VAAEILGIK	2	VAAEILGIK2	14928	38776.9	26140.7
P97531	P97531	CIP4_RAT	Trip10	Cdc42-interacting protein 4	1	VAAESVDAK	VAAESVDAK	2	VAAESVDAK2	23754.9	27027.6	21874.7
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	VAAFLDDLSQK	VAAFLDDLSQK	2	VAAFLDDLSQK2	14488.7	19072.8	15064
Q64350	Q64350	EI2BE_RAT	Eif2b5	Translation initiation factor eIF-2B subunit epsilon	1	VAAGAQIHQSLLCDR	VAAGAQIHQSLLC(UniMod:4)DR	3	VAAGAQIHQSLLC(UniMod:4)DR3	43822.7	36640.5	37427.7
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	VAAGCFR	VAAGC(UniMod:4)FR	2	VAAGC(UniMod:4)FR2	49262.8	52134.7	32791.4
Q8K3P7	Q8K3P7	HINT3_RAT	Hint3	Adenosine 5'-monophosphoramidase HINT3	1	VAAGQEPETELLYCENK	VAAGQEPETELLYC(UniMod:4)ENK	2	VAAGQEPETELLYC(UniMod:4)ENK2	20783.2	10572.3	14771.5
Q8K3P7	Q8K3P7	HINT3_RAT	Hint3	Adenosine 5'-monophosphoramidase HINT3	1	VAAGQEPETELLYCENK	VAAGQEPETELLYC(UniMod:4)ENK	3	VAAGQEPETELLYC(UniMod:4)ENK3	7466.53	5090.8	8249.1
Q6P0K8	Q6P0K8;Q9WU82	PLAK_RAT	Jup	Junction plakoglobin	0	VAAGVLCELAQDK	VAAGVLC(UniMod:4)ELAQDK	2	VAAGVLC(UniMod:4)ELAQDK2	2249.14		3284.7
Q4V794	Q4V794	Q4V794_RAT	Vps37a	VPS37A subunit of ESCRT-I	1	VAAHEAEEESDNIAEDFLEGK	VAAHEAEEESDNIAEDFLEGK	3	VAAHEAEEESDNIAEDFLEGK3		8858.39	10942.8
A0A8I5ZS69	A0A8I5ZS69	A0A8I5ZS69_RAT	Snx6	Sorting nexin	1	VAAHPILR	VAAHPILR	2	VAAHPILR2	7644.96	4900.84	9753.49
Q99M64	Q99M64	P4K2A_RAT	Pi4k2a	Phosphatidylinositol 4-kinase type 2-alpha	1	VAAIDNGLAFPLK	VAAIDNGLAFPLK	2	VAAIDNGLAFPLK2	3900.49	5009.14	2633.38
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	VAAIGDQK	VAAIGDQK	2	VAAIGDQK2	128109	147803	128497
D3ZL50	D3ZL50	D3ZL50_RAT	Skic3	Tetratricopeptide repeat domain 37	1	VAAIQQILGR	VAAIQQILGR	2	VAAIQQILGR2	2984.96	3963.91	3599.67
F1LP42	F1LP42	F1LP42_RAT	Ihh	Hedgehog protein	1	VAAISTHVALGSYAPLTR	VAAISTHVALGSYAPLTR	3	VAAISTHVALGSYAPLTR3	37931.6	34752.5	38994.4
D3ZP13	D3ZP13	D3ZP13_RAT	Qsox2	Sulfhydryl oxidase	1	VAALDCAEEK	VAALDC(UniMod:4)AEEK	2	VAALDC(UniMod:4)AEEK2	17622.2	22003.3	24847.5
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	VAALEASGSLATLYPGAFSSHLLPR	VAALEASGSLATLYPGAFSSHLLPR	3	VAALEASGSLATLYPGAFSSHLLPR3	16492.2	18720.5	18928.7
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	VAALEIEK	VAALEIEK	2	VAALEIEK2	85239.3	120645	104568
O88902	O88902	PTN23_RAT	Ptpn23	Tyrosine-protein phosphatase non-receptor type 23 (Fragment)	1	VAALLER	VAALLER	2	VAALLER2	13369.2	11352.3	
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	VAALQNLVK	VAALQNLVK	2	VAALQNLVK2	88491.8	108487	80885.5
Q642A9	Q642A9	Q642A9_RAT	Vps16	Vacuolar protein sorting-associated protein 16 homolog	1	VAALQTAADAFYK	VAALQTAADAFYK	2	VAALQTAADAFYK2	43976.9	41767.9	38874.9
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	VAALTGLPFVTAPNK	VAALTGLPFVTAPNK	2	VAALTGLPFVTAPNK2	210008	195547	214196
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	VAALTGLPFVTAPNK	VAALTGLPFVTAPNK	3	VAALTGLPFVTAPNK3	7473.56	6574.75	6117.67
Q63357	Q63357	MYO1D_RAT	Myo1d	Unconventional myosin-Id	1	VAAMEMLK	VAAMEMLK	2	VAAMEMLK2	5124.89	9425.35	4116.97
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	VAAMGALQGLR	VAAMGALQGLR	2	VAAMGALQGLR2	134081	87659.9	111445
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	VAANAPK	VAANAPK	1	VAANAPK1			33620.4
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VAAPDVVVPTLDTVR	VAAPDVVVPTLDTVR	2	VAAPDVVVPTLDTVR2	183783	255392	201142
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VAAPDVVVPTLDTVR	VAAPDVVVPTLDTVR	3	VAAPDVVVPTLDTVR3	45688.4	51470.2	63940.3
Q6QGW5	Q6QGW5	SRA1_RAT	Sra1	Steroid receptor RNA activator 1	1	VAAPQDGSPR	VAAPQDGSPR	2	VAAPQDGSPR2	1470.93		
Q1HCL7	Q1HCL7	NAKD2_RAT	Nadk2	NAD kinase 2, mitochondrial	1	VAAQAVEDVLNIAR	VAAQAVEDVLNIAR	2	VAAQAVEDVLNIAR2	9042.85	3570.36	11264.9
Q5XI86	Q5XI86	Q5XI86_RAT	Ptrh2	aminoacyl-tRNA hydrolase	1	VAAQCSHAAVSAYK	VAAQC(UniMod:4)SHAAVSAYK	3	VAAQC(UniMod:4)SHAAVSAYK3	46051.1	38874.2	34412.9
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	VAAQGELVR	VAAQGELVR	2	VAAQGELVR2	75368.3	59523.1	67285.9
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	VAAQVDGGAQVQQVLNIECLR	VAAQVDGGAQVQQVLNIEC(UniMod:4)LR	3	VAAQVDGGAQVQQVLNIEC(UniMod:4)LR3		3628.89	2390.32
D3ZAZ0	D3ZAZ0	D3ZAZ0_RAT	Eif3m	Eukaryotic translation initiation factor 3 subunit M	1	VAASCGAIQYIPTELDQVR	VAASC(UniMod:4)GAIQYIPTELDQVR	3	VAASC(UniMod:4)GAIQYIPTELDQVR3	22809.5	12112.6	21495.6
D3ZAZ0	D3ZAZ0	D3ZAZ0_RAT	Eif3m	Eukaryotic translation initiation factor 3 subunit M	1	VAASCGAIQYIPTELDQVRK	VAASC(UniMod:4)GAIQYIPTELDQVRK	3	VAASC(UniMod:4)GAIQYIPTELDQVRK3	19735.6	22563.8	19779.8
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	VAASNIVQMK	VAASNIVQMK	2	VAASNIVQMK2	3.47123e+06	3.50319e+06	3.94162e+06
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	VAASNIVQMKDDHDK	VAASNIVQMKDDHDK	3	VAASNIVQMKDDHDK3	93716.1	118250	109510
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	VAASNIVQMKDDHDK	VAASNIVQMKDDHDK	4	VAASNIVQMKDDHDK4	60648.6	65142.2	92703.9
A0A0G2K059	A0A0G2K059	A0A0G2K059_RAT	Mcu	Calcium uniporter protein	1	VAASTGIDLLLLDDFK	VAASTGIDLLLLDDFK	2	VAASTGIDLLLLDDFK2	33834.3	29834.4	31688.1
A0A0G2K059	A0A0G2K059	A0A0G2K059_RAT	Mcu	Calcium uniporter protein	1	VAASTGIDLLLLDDFK	VAASTGIDLLLLDDFK	3	VAASTGIDLLLLDDFK3	3904.42	3262.99	6644.13
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	VAASVGNAQK	VAASVGNAQK	1	VAASVGNAQK1	7040.38		12564.5
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	VAASVGNAQK	VAASVGNAQK	2	VAASVGNAQK2	544914		567872
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	VAATSGLYGSNLMEHTEIDHWLEFSATK	VAATSGLYGSNLMEHTEIDHWLEFSATK	4	VAATSGLYGSNLMEHTEIDHWLEFSATK4	12375	24776.1	22709.8
Q76MX4	Q76MX4	MAFG_RAT	Mafg	Transcription factor MafG	1	VAATSVITIVK	VAATSVITIVK	2	VAATSVITIVK2	6623.6	4417.12	1970.38
A0A8I5YC59	A0A8I5YC59	A0A8I5YC59_RAT	Pcdh10	Protocadherin 10	1	VAAVDADDGENAR	VAAVDADDGENAR	2	VAAVDADDGENAR2	1715.91	3645.78	
Q5BK49	Q5BK49	TACT_RAT	Cd96	T-cell surface protein tactile	1	VAAVETLK	VAAVETLK	2	VAAVETLK2	31182.1	9810.73	15688.3
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	VAAVGSQSYLSSILR	VAAVGSQSYLSSILR	2	VAAVGSQSYLSSILR2	56560.1	62937.1	59475
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	VAAVGSQSYLSSILR	VAAVGSQSYLSSILR	3	VAAVGSQSYLSSILR3	3899.41	4930.92	6963.56
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	VAAVSNIAAAAVGR	VAAVSNIAAAAVGR	2	VAAVSNIAAAAVGR2	17965.8	38377.6	23801.1
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	VAAVSNIAAAAVGR	VAAVSNIAAAAVGR	3	VAAVSNIAAAAVGR3	8378.58	11401.8	12958.9
D3ZRC4	D3ZRC4	PLPL8_RAT	Pnpla8	Calcium-independent phospholipase A2-gamma	1	VAAVSTIVNR	VAAVSTIVNR	2	VAAVSTIVNR2	25995.7	23985.2	33765
D4ABB8	D4ABB8	ATP9B_RAT	Atp9b	Probable phospholipid-transporting ATPase IIB	1	VAAVVESLER	VAAVVESLER	2	VAAVVESLER2	24461.3		16184.8
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VAAYDKLEK	VAAYDKLEK	2	VAAYDKLEK2	485043	570686	466822
A0A0G2JVX9	A0A0G2JVX9	A0A0G2JVX9_RAT	Arpp21	cAMP regulated phosphoprotein 21	1	VAAYFGLDHNVDQTGK	VAAYFGLDHNVDQTGK	3	VAAYFGLDHNVDQTGK3	11731.5	20023.8	15751.8
A0A0G2K4E8	A0A0G2K4E8	A0A0G2K4E8_RAT	R3hdm2	R3H domain containing 2	1	VAAYFGMDHNVDQTGK	VAAYFGMDHNVDQTGK	3	VAAYFGMDHNVDQTGK3	13168.4		11465.8
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	VAAYGGK	VAAYGGK	1	VAAYGGK1	175968		145455
A2VCX1	A2VCX1	TIPRL_RAT	Tiprl	TIP41-like protein	1	VACAEEWQESR	VAC(UniMod:4)AEEWQESR	2	VAC(UniMod:4)AEEWQESR2	6504.85	5244.62	5310.08
A0A8I5Y7Q0	A0A8I5Y7Q0	A0A8I5Y7Q0_RAT	Vps13b	Vacuolar protein sorting 13 homolog B	1	VACDVEIDGAR	VAC(UniMod:4)DVEIDGAR	2	VAC(UniMod:4)DVEIDGAR2		2832	1959.37
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	VACEQPPSVENGVADPR	VAC(UniMod:4)EQPPSVENGVADPR	2	VAC(UniMod:4)EQPPSVENGVADPR2	58540.9	53747.4	41435.8
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	VACEQPPSVENGVADPR	VAC(UniMod:4)EQPPSVENGVADPR	3	VAC(UniMod:4)EQPPSVENGVADPR3	9925.38	11279.7	4321.5
P18298	P18298;A0A8I6G8F2	METK2_RAT	Mat2a	S-adenosylmethionine synthase isoform type-2	0	VACETVAK	VAC(UniMod:4)ETVAK	2	VAC(UniMod:4)ETVAK2	88871.3	67501.6	58812.9
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	VACFHDAVQGYASLLYK	VAC(UniMod:4)FHDAVQGYASLLYK	3	VAC(UniMod:4)FHDAVQGYASLLYK3		1005.19	
P21531	D4A9G1;P21531	RL3_RAT	Rpl3	Large ribosomal subunit protein uL3	0	VACIGAWHPAR	VAC(UniMod:4)IGAWHPAR	3	VAC(UniMod:4)IGAWHPAR3	30834	24736.1	18862.2
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	VACITEQVLTLVNK	VAC(UniMod:4)ITEQVLTLVNK	2	VAC(UniMod:4)ITEQVLTLVNK2	38626.4	47846.4	46699.4
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	VACITEQVLTLVNK	VAC(UniMod:4)ITEQVLTLVNK	3	VAC(UniMod:4)ITEQVLTLVNK3	62163.4	56556.8	48593.7
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	VACITEQVLTLVNKR	VAC(UniMod:4)ITEQVLTLVNKR	3	VAC(UniMod:4)ITEQVLTLVNKR3	102290	79820.3	108715
F7FGS9	F7FGS9	F7FGS9_RAT	Marchf5	Membrane associated ring-CH-type finger 5	1	VACPQCNAEYLIVFPK	VAC(UniMod:4)PQC(UniMod:4)NAEYLIVFPK	2	VAC(UniMod:4)PQC(UniMod:4)NAEYLIVFPK2	10727.8	9943.79	
F7FGS9	F7FGS9	F7FGS9_RAT	Marchf5	Membrane associated ring-CH-type finger 5	1	VACPQCNAEYLIVFPK	VAC(UniMod:4)PQC(UniMod:4)NAEYLIVFPK	3	VAC(UniMod:4)PQC(UniMod:4)NAEYLIVFPK3	32558.8		25667.9
O88422	O88422	GALT5_RAT	Galnt5	Polypeptide N-acetylgalactosaminyltransferase 5	1	VACPVIEVINDKDMSYMTVDNFQR	VAC(UniMod:4)PVIEVINDKDMSYMTVDNFQR	3	VAC(UniMod:4)PVIEVINDKDMSYMTVDNFQR3	14681.2	15034.7	6100.18
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	VACQGEVVR	VAC(UniMod:4)QGEVVR	2	VAC(UniMod:4)QGEVVR2	82451.1	57215.5	66424.3
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	VACQGEVVRK	VAC(UniMod:4)QGEVVRK	3	VAC(UniMod:4)QGEVVRK3	1638.87		5470.35
P69478	P69478;Q498S0;D3ZPV0	CHSTB_RAT	Chst11	Carbohydrate sulfotransferase 11	0	VACTNWK	VAC(UniMod:4)TNWK	1	VAC(UniMod:4)TNWK1	1777.89		1614.9
P69478	P69478;Q498S0;D3ZPV0	CHSTB_RAT	Chst11	Carbohydrate sulfotransferase 11	0	VACTNWK	VAC(UniMod:4)TNWK	2	VAC(UniMod:4)TNWK2	107983	123801	106698
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	VADAAASLEQQLEQVK	VADAAASLEQQLEQVK	2	VADAAASLEQQLEQVK2	1282.61	3790.14	5114.66
P01946	P01946	HBA_RAT	Hba1	Hemoglobin subunit alpha-1/2	1	VADALAK	VADALAK	1	VADALAK1	22693.3	23403.1	24723.7
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	VADELLFEDLLTPEGSHIR	VADELLFEDLLTPEGSHIR	3	VADELLFEDLLTPEGSHIR3	47209.4	24507.5	36397.8
Q9WUD9	Q9WUD9;Q5FVG7;Q62662;A0A8I6A5T6;P97523	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	0	VADFGLAR	VADFGLAR	2	VADFGLAR2	663467	584829	661783
E9PT20	E9PT20;F1M0N1	E9PT20_RAT	Abl1	Tyrosine-protein kinase	0	VADFGLSR	VADFGLSR	2	VADFGLSR2	4459.8	3854.69	6836
Q4KM74	Q4KM74	SC22B_RAT	Sec22b	Vesicle-trafficking protein SEC22b	1	VADGLPLAASMQEDEQSGR	VADGLPLAASMQEDEQSGR	3	VADGLPLAASMQEDEQSGR3	43007.2	34866.6	49969.5
P10760	P10760	SAHH_RAT	Ahcy	Adenosylhomocysteinase	1	VADIGLAAWGR	VADIGLAAWGR	2	VADIGLAAWGR2	35151.3	24758.7	35197.4
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	VADINDHAPAFPQAR	VADINDHAPAFPQAR	3	VADINDHAPAFPQAR3	40171.7	36453.3	41006.5
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	VADISGDTQK	VADISGDTQK	2	VADISGDTQK2	262210	165447	382525
Q01992	Q01992	MIPEP_RAT	Mipep	Mitochondrial intermediate peptidase	1	VADLADFVK	VADLADFVK	2	VADLADFVK2	11175.6	6126.5	5884.05
P70569	P70569	MYO5B_RAT	Myo5b	Unconventional myosin-Vb	1	VADLEHENALLK	VADLEHENALLK	3	VADLEHENALLK3	5277.36	10555.5	6214.12
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	VADLILEK	VADLILEK	2	VADLILEK2	42045.4	50280.6	44900.3
A0A0G2JYX9	A0A0G2JYX9	A0A0G2JYX9_RAT	Irak1	Interleukin-1 receptor-associated kinase 1	1	VADLVHILTHLQLLR	VADLVHILTHLQLLR	3	VADLVHILTHLQLLR3	3545.56		
A0A0G2JYX9	A0A0G2JYX9	A0A0G2JYX9_RAT	Irak1	Interleukin-1 receptor-associated kinase 1	1	VADLVHILTHLQLLR	VADLVHILTHLQLLR	4	VADLVHILTHLQLLR4	3473.79	1207.35	
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	VADMALHYANK	VADMALHYANK	2	VADMALHYANK2	29158.4	14202.9	24521.3
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	VADMALHYANK	VADMALHYANK	3	VADMALHYANK3	102828	175017	152750
A0A8I6AWT9	D4A3S6;A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	0	VADMATNTR	VADMATNTR	2	VADMATNTR2	210581	205158	191310
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	VADMEQEVVFAMFDENK	VADMEQEVVFAMFDENK	3	VADMEQEVVFAMFDENK3	56170	51237.6	55884.6
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	VADMEQEVVFAMFDENK	VADMEQEVVFAMFDENK	4	VADMEQEVVFAMFDENK4	19765.7	42276.7	32127.6
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VADNGKPQLSSLTHIDIR	VADNGKPQLSSLTHIDIR	4	VADNGKPQLSSLTHIDIR4	12305.6	19678.6	12719
D4A589	D4A589	D4A589_RAT	Smg6	Telomerase-binding protein EST1A	1	VADNQELQLSNLLSR	VADNQELQLSNLLSR	2	VADNQELQLSNLLSR2	2445.36		1003.71
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	VADPDHDHTGFLTEYVATR	VADPDHDHTGFLTEYVATR	3	VADPDHDHTGFLTEYVATR3	49085.1	55123.5	25227.4
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	VADPDHDHTGFLTEYVATR	VADPDHDHTGFLTEYVATR	4	VADPDHDHTGFLTEYVATR4	114565	107621	124771
P82471	P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	1	VADPSYLPTQQDVLR	VADPSYLPTQQDVLR	2	VADPSYLPTQQDVLR2	1.03504e+06	1.02146e+06	1.07181e+06
P82471	P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	1	VADPSYLPTQQDVLR	VADPSYLPTQQDVLR	3	VADPSYLPTQQDVLR3	66813.2	80289.4	83895.4
I6L9G5	I6L9G5	RCN3_RAT	Rcn3	Reticulocalbin-3	1	VADQDGDSMATR	VADQDGDSMATR	2	VADQDGDSMATR2	80333.1	118209	112623
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	VADVLGAAFATR	VADVLGAAFATR	2	VADVLGAAFATR2	9225.64	2568.53	9412.04
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	VADWLAQNNPPQMVWER	VADWLAQNNPPQMVWER	3	VADWLAQNNPPQMVWER3	33105.1	38261.4	35905.5
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	VADWTGATYQDK	VADWTGATYQDK	2	VADWTGATYQDK2	75610.2	72399.6	84011
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	VADWTGATYQDKR	VADWTGATYQDKR	2	VADWTGATYQDKR2		2802.4	3976.72
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	VADWTGATYQDKR	VADWTGATYQDKR	3	VADWTGATYQDKR3	36578.7	45213	48720.6
Q9QZM5	Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	1	VADYCENNYIQATDK	VADYC(UniMod:4)ENNYIQATDK	2	VADYC(UniMod:4)ENNYIQATDK2	15318	23438.7	16171.8
Q9QZM5	Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	1	VADYCENNYIQATDKR	VADYC(UniMod:4)ENNYIQATDKR	3	VADYC(UniMod:4)ENNYIQATDKR3	23344.5	14505.2	6508.07
A0A8I5ZLD3	A0A8I5ZLD3	A0A8I5ZLD3_RAT	Abi2	Abl-interactor 2	1	VADYCENNYIQSPDK	VADYC(UniMod:4)ENNYIQSPDK	2	VADYC(UniMod:4)ENNYIQSPDK2	9708.21	6846.67	7139.95
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	VADYGMWER	VADYGMWER	2	VADYGMWER2	14219.1	12111	14684.1
P13264	P13264	GLSK_RAT	Gls	Glutaminase kidney isoform, mitochondrial	1	VADYIPQLAK	VADYIPQLAK	2	VADYIPQLAK2	46316	51428.8	51421.1
A0A8I5ZU41	A0A8I5YBI0;A0A8I6AIH1;A0A8I5ZU41	A0A8I5ZU41_RAT	Amy1	Alpha-amylase	0	VADYMNHLIDIGVAGFR	VADYMNHLIDIGVAGFR	3	VADYMNHLIDIGVAGFR3	5741.35	4955.41	5516.17
D3ZAP9	A0A8I6ALX9;D3ZAP9;O35077	D3ZAP9_RAT	Gpd1l1	Glycerol-3-phosphate dehydrogenase [NAD(+)]	0	VAEAFAR	VAEAFAR	2	VAEAFAR2	32890.4	26202.9	25349.2
Q6AY97	Q6AY97	CCD91_RAT	Ccdc91	Coiled-coil domain-containing protein 91	1	VAEAIQAAVQEQQR	VAEAIQAAVQEQQR	2	VAEAIQAAVQEQQR2	4054.01	6972.46	9130.47
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	VAEAQVFLR	VAEAQVFLR	2	VAEAQVFLR2	147853	130299	143475
Q4FZT2	Q4FZT2	PPME1_RAT	Ppme1	Protein phosphatase methylesterase 1	1	VAEAVATFLIR	VAEAVATFLIR	2	VAEAVATFLIR2	26029.2	11795.1	12496.6
P06302	P06302	PTMA_RAT	Ptma	Prothymosin alpha	1	VAEDDEDDDVETK	VAEDDEDDDVETK	2	VAEDDEDDDVETK2	9097.71	9144.79	14002.6
P06302	P06302	PTMA_RAT	Ptma	Prothymosin alpha	1	VAEDDEDDDVETKK	VAEDDEDDDVETKK	3	VAEDDEDDDVETKK3	2893.65		5315.98
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	VAEDEAEAGVK	VAEDEAEAGVK	2	VAEDEAEAGVK2	30726.5	29675.1	28064.2
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	VAEDLESEGLMAEEVQAVQQQEVYGMMPR	VAEDLESEGLMAEEVQAVQQQEVYGMMPR	4	VAEDLESEGLMAEEVQAVQQQEVYGMMPR4	6401.16	16001.5	21890.3
A0A0G2JT44	A0A0G2JT44	A0A0G2JT44_RAT	Tmc6	Transmembrane channel-like protein	1	VAEEGLELLSLGPGR	VAEEGLELLSLGPGR	2	VAEEGLELLSLGPGR2	10232.7	12355.3	8700.1
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	VAEEHAPSIVFIDEIDAIGTK	VAEEHAPSIVFIDEIDAIGTK	3	VAEEHAPSIVFIDEIDAIGTK3	85606.7	100494	106826
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	VAEEHAPSIVFIDEIDAIGTKR	VAEEHAPSIVFIDEIDAIGTKR	4	VAEEHAPSIVFIDEIDAIGTKR4	4873.06	6026.48	3058.57
A0A8I6AGG9	A0A8I6AGG9	A0A8I6AGG9_RAT	Chchd3	Coiled-coil-helix-coiled-coil-helix domain containing 3	1	VAEELALEQAK	VAEELALEQAK	2	VAEELALEQAK2	179446	143533	162789
Q68G38	Q68G38	TOR1A_RAT	Tor1a	Torsin-1A	1	VAEEMTFFPK	VAEEMTFFPK	2	VAEEMTFFPK2	16476.7	18897.4	21422.6
Q68G38	Q68G38	TOR1A_RAT	Tor1a	Torsin-1A	1	VAEEMTFFPKEEK	VAEEMTFFPKEEK	3	VAEEMTFFPKEEK3	16719.5	12552.4	18603.6
P20673	P20673	ARLY_RAT	Asl	Argininosuccinate lyase	1	VAEEWAQGIFK	VAEEWAQGIFK	2	VAEEWAQGIFK2	13778.4	8608.42	12926.5
P08721	P08721	OSTP_RAT	Spp1	Osteopontin	1	VAEFGSSEEK	VAEFGSSEEK	2	VAEFGSSEEK2	437508	425896	434811
F1LMQ3	F1LMQ3	F1LMQ3_RAT	Psmd8	26S proteasome non-ATPase regulatory subunit 8	1	VAEFHTELER	VAEFHTELER	2	VAEFHTELER2	5247.1	5962.27	8531.59
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	VAEFPHGYSSCEDIPR	VAEFPHGYSSC(UniMod:4)EDIPR	3	VAEFPHGYSSC(UniMod:4)EDIPR3	47972.7	49336.7	51535.2
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VAEFTTDLMEEEEK	VAEFTTDLMEEEEK	2	VAEFTTDLMEEEEK2	11146.7	36045.9	35299
Q5BK21	Q5BK21	Q5BK21_RAT	Tm7sf2	Transmembrane 7 superfamily member 2	1	VAEGLELK	VAEGLELK	2	VAEGLELK2	7280.85	14265	7786.58
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	VAEGQELELMR	VAEGQELELMR	2	VAEGQELELMR2	36417.6	46741.6	31861.5
Q5I0D1	Q5I0D1	GLOD4_RAT	Glod4	Glyoxalase domain-containing protein 4	1	VAEGVFETEAPGGYK	VAEGVFETEAPGGYK	2	VAEGVFETEAPGGYK2	8288.79	5828.05	8524.85
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	VAEHGTPKPFR	VAEHGTPKPFR	3	VAEHGTPKPFR3	38635.7	35427.3	10808.2
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	VAEHLEMCPASVVCCTMEWNR	VAEHLEMC(UniMod:4)PASVVC(UniMod:4)C(UniMod:4)TMEWNR	3	VAEHLEMC(UniMod:4)PASVVC(UniMod:4)C(UniMod:4)TMEWNR3	27609.5	15733.6	14880.5
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	VAEIEHAEK	VAEIEHAEK	2	VAEIEHAEK2	45968.5	27144.3	32948.9
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	VAEIEHAEKEK	VAEIEHAEKEK	2	VAEIEHAEKEK2	46472		27005
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	VAEIEHAEKEK	VAEIEHAEKEK	3	VAEIEHAEKEK3			93704.7
Q6AXR1	Q6AXR1	Q6AXR1_RAT	Tbc1d20	TBC1 domain family, member 20	1	VAEIHQALNSDPTDVAALR	VAEIHQALNSDPTDVAALR	3	VAEIHQALNSDPTDVAALR3	8188.46	3055.05	8136.02
A0A8I5ZU99	A0A8I5ZU99	A0A8I5ZU99_RAT	Ppm1l	Protein phosphatase, Mg2+/Mn2+ dependent, 1L	1	VAEIMQNDR	VAEIMQNDR	2	VAEIMQNDR2	5342.61	4561.93	4943.33
Q32PY2	Q32PY2	LIPH_RAT	Liph	Lipase member H	1	VAEISLLFSTK	VAEISLLFSTK	2	VAEISLLFSTK2	4094.77	1823.06	2845.44
Q4QR75	Q4QR75	EXOS9_RAT	Exosc9	Exosome complex component RRP45	1	VAEITELIQK	VAEITELIQK	2	VAEITELIQK2	8352.16	4109.18	8771.76
Q9Z2X5	Q9Z2X5	HOME3_RAT	Homer3	Homer protein homolog 3	1	VAELEAQVAAEPVR	VAELEAQVAAEPVR	2	VAELEAQVAAEPVR2	12396	13396.1	10956.4
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	VAELEKR	VAELEKR	2	VAELEKR2	31872.9		30612.6
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	VAELEPLK	VAELEPLK	2	VAELEPLK2	9163.59	10861.7	15550.7
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	VAELEPLKEQLR	VAELEPLKEQLR	2	VAELEPLKEQLR2	4603.91	4045.73	3880.23
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	VAELEPLKEQLR	VAELEPLKEQLR	3	VAELEPLKEQLR3	121879	126524	107869
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	VAELFEK	VAELFEK	2	VAELFEK2	162042	142159	137106
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	VAELHSK	VAELHSK	2	VAELHSK2			6390.3
A0A8I5ZXD6	D4A5F0;A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	0	VAELILHGQEEEKPAQDQAK	VAELILHGQEEEKPAQDQAK	3	VAELILHGQEEEKPAQDQAK3	9419.76	7354.8	4581.2
A0A8I5ZXD6	D4A5F0;A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	0	VAELILHGQEEEKPAQDQAK	VAELILHGQEEEKPAQDQAK	4	VAELILHGQEEEKPAQDQAK4	15960.3	17515.1	23808.9
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	VAELLGEGDGR	VAELLGEGDGR	2	VAELLGEGDGR2	15009	7656.72	12545.8
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	VAELLGEGDGRK	VAELLGEGDGRK	2	VAELLGEGDGRK2	1933.83		7646.71
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	VAELLGEGDGRK	VAELLGEGDGRK	3	VAELLGEGDGRK3	41985.4	46199.4	27069.7
Q5U2M6	Q5U2M6	DCAF8_RAT	Dcaf8	DDB1- and CUL4-associated factor 8	1	VAELSATQCCK	VAELSATQC(UniMod:4)C(UniMod:4)K	2	VAELSATQC(UniMod:4)C(UniMod:4)K2	15386.7	22918.7	14959.6
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VAELSIVVK	VAELSIVVK	2	VAELSIVVK2	768950	817180	656908
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	VAELSSDDFHLDR	VAELSSDDFHLDR	2	VAELSSDDFHLDR2	6964.18	6598.05	8467.08
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	VAELSSDDFHLDR	VAELSSDDFHLDR	3	VAELSSDDFHLDR3	33015.4	40467.5	27951.4
A0A8I5YC01	A0A8I5YC01	A0A8I5YC01_RAT	Gimap1	GTPase, IMAP family member 1	1	VAEMVVAR	VAEMVVAR	2	VAEMVVAR2	25318.1	27668.5	30007.1
Q5BJT4	Q5BJT4;A0A8I6AP63	TXD15_RAT	Txndc15	Thioredoxin domain-containing protein 15	0	VAEPSEASLGPR	VAEPSEASLGPR	2	VAEPSEASLGPR2	8234.17	9958.17	
B4F7E7	B4F7E7	PALS1_RAT	Pals1	Protein PALS1	1	VAEQEMQLEPITDER	VAEQEMQLEPITDER	2	VAEQEMQLEPITDER2	6674.53	4440.77	7094.23
B4F7E7	B4F7E7	PALS1_RAT	Pals1	Protein PALS1	1	VAEQEMQLEPITDER	VAEQEMQLEPITDER	3	VAEQEMQLEPITDER3	9502.02	4563.53	7331.66
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	VAEQTPLTALYVANLIK	VAEQTPLTALYVANLIK	2	VAEQTPLTALYVANLIK2	95691.2	84879.1	110161
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	VAEQTPLTALYVANLIK	VAEQTPLTALYVANLIK	3	VAEQTPLTALYVANLIK3	53479.7	52908.1	81786.6
O55012	O55012	PICAL_RAT	Picalm	Phosphatidylinositol-binding clathrin assembly protein	1	VAEQVGIDR	VAEQVGIDR	2	VAEQVGIDR2	31993.2	19241	17920.5
D3ZNV6	D3ZNV6	D3ZNV6_RAT	Elmod2	ELMO domain containing 2	1	VAESDLDR	VAESDLDR	2	VAESDLDR2	19575.9	18600	11817
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	VAESELIGTPDGPCYPVPPVPR	VAESELIGTPDGPC(UniMod:4)YPVPPVPR	3	VAESELIGTPDGPC(UniMod:4)YPVPPVPR3	11797.1	13428.5	26462.7
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	VAESTEEVSSLRPPR	VAESTEEVSSLRPPR	3	VAESTEEVSSLRPPR3	65693.8	49761.6	69810.1
A0A8I6GEV9	A0A8I6GEV9	A0A8I6GEV9_RAT	Abce1	ATP binding cassette subfamily E member 1	1	VAETANEEEVK	VAETANEEEVK	2	VAETANEEEVK2	3180.17	2879	
A0A8I6GEV9	A0A8I6GEV9	A0A8I6GEV9_RAT	Abce1	ATP binding cassette subfamily E member 1	1	VAETANEEEVKK	VAETANEEEVKK	3	VAETANEEEVKK3			27152
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	VAETAVQLFISGDK	VAETAVQLFISGDK	2	VAETAVQLFISGDK2	86670.6	82479.1	57173.1
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	VAETAVQLFISGDK	VAETAVQLFISGDK	3	VAETAVQLFISGDK3	12225.8	13056.5	9313.6
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	VAETELAK	VAETELAK	2	VAETELAK2		6626.52	
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	VAETELAKPLFDALLR	VAETELAKPLFDALLR	3	VAETELAKPLFDALLR3	20381.1	18546.5	19259.4
A0A0G2JVT8	A0A8I6ARY9;A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	0	VAETGPLNLIDPVHEFK	VAETGPLNLIDPVHEFK	3	VAETGPLNLIDPVHEFK3	11840.2	16085	7936.49
Q5PQX0	Q5PQX0	UXS1_RAT	Uxs1	UDP-glucuronic acid decarboxylase 1	1	VAETMCYAYMK	VAETMC(UniMod:4)YAYMK	2	VAETMC(UniMod:4)YAYMK2	10492.2	4761.99	9925.7
D3ZMS3	D3ZMS3	D3ZMS3_RAT	Matn4	Matrilin 4	1	VAEVAAQAR	VAEVAAQAR	2	VAEVAAQAR2			2891.59
A0A8I6ALT5	A0A8I6ALT5	A0A8I6ALT5_RAT	Dok2	Docking protein 2	1	VAEVGSEASSPR	VAEVGSEASSPR	2	VAEVGSEASSPR2	86880.9	95444.2	91469
Q5XI97	Q5XI97	AASD1_RAT	Aarsd1	Alanyl-tRNA editing protein Aarsd1	1	VAEVLEGK	VAEVLEGK	2	VAEVLEGK2	19876.4	19925	28899.7
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VAEVLFDAADANAIEEVNLAYENVK	VAEVLFDAADANAIEEVNLAYENVK	3	VAEVLFDAADANAIEEVNLAYENVK3	41788.9	56530.5	43777.8
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	VAEVLNDPENVEK	VAEVLNDPENVEK	2	VAEVLNDPENVEK2	67144.6	85640.9	83212
P19234	P19234	NDUV2_RAT	Ndufv2	NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial	1	VAEVLQVPPMR	VAEVLQVPPMR	2	VAEVLQVPPMR2	40863	38546.1	25583.4
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	VAEVPALVQK	VAEVPALVQK	2	VAEVPALVQK2	3.20164e+07	2.84954e+07	2.74435e+07
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	VAEVPALVQKDTVVKPVIVEPEGIEK	VAEVPALVQKDTVVKPVIVEPEGIEK	4	VAEVPALVQKDTVVKPVIVEPEGIEK4	6189.95	4476.36	10337.8
F1LVX1	F1LVX1	F1LVX1_RAT	Dnajc1	DnaJ heat shock protein family (Hsp40) member C1	1	VAEVVTR	VAEVVTR	2	VAEVVTR2	23315.7	21201.9	23037.9
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	VAEYGGNTLGYGSR	VAEYGGNTLGYGSR	2	VAEYGGNTLGYGSR2	6059.95	7083.59	6049.95
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	VAEYIDWILEK	VAEYIDWILEK	2	VAEYIDWILEK2	187732	191035	159199
Q9WU61	Q9WU61	CLCC1_RAT	Clcc1	Chloride channel CLIC-like protein 1	1	VAFAQHQANVAK	VAFAQHQANVAK	3	VAFAQHQANVAK3	5428.33	8805.78	7846.7
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	VAFCGAVEEGR	VAFC(UniMod:4)GAVEEGR	2	VAFC(UniMod:4)GAVEEGR2	20069.4	26545.3	19590.3
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VAFCTVNVILTDDNDNAPQFR	VAFC(UniMod:4)TVNVILTDDNDNAPQFR	3	VAFC(UniMod:4)TVNVILTDDNDNAPQFR3	19127.2	26437.4	20245.7
F7FMS0	F7FMS0	F7FMS0_RAT	Mst1	Macrophage stimulating 1	1	VAFCYQIPR	VAFC(UniMod:4)YQIPR	2	VAFC(UniMod:4)YQIPR2	8962.76	10019.9	10566.4
Q3MHS7	Q3MHS7	Q3MHS7_RAT	Gmds	GDP-mannose 4,6-dehydratase	1	VAFDELVR	VAFDELVR	2	VAFDELVR2	43985.2	40380.2	35485.4
Q8R2E7	Q8R2E7	Q8R2E7_RAT	Fadd	FAS-associated death domain protein	1	VAFDIVCDNVGR	VAFDIVC(UniMod:4)DNVGR	2	VAFDIVC(UniMod:4)DNVGR2	8461.55	10878.8	11989
D3ZAR1	D3ZAR1	ARH_RAT	Ldlrap1	Low density lipoprotein receptor adapter protein 1	1	VAFEFWQVSK	VAFEFWQVSK	2	VAFEFWQVSK2	6696.36	12379.4	4982.12
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	VAFPALGQEVSK	VAFPALGQEVSK	2	VAFPALGQEVSK2	34214.7	30610.3	39468.1
Q6AY17	Q6AY17;Q5XIJ5	AB17B_RAT	Abhd17b	Alpha/beta hydrolase domain-containing protein 17B	0	VAFPDTK	VAFPDTK	2	VAFPDTK2	73779	64582.7	65688.6
Q63621	Q63621	IL1AP_RAT	Il1rap	Interleukin-1 receptor accessory protein	1	VAFPLEVVQK	VAFPLEVVQK	2	VAFPLEVVQK2	211870	217201	199876
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	VAFSAALSLPR	VAFSAALSLPR	2	VAFSAALSLPR2	144267	120235	110245
P63182	P63182	CBLN1_RAT	Cbln1	Cerebellin-1	1	VAFSAIR	VAFSAIR	2	VAFSAIR2	40456.2	30939.7	60673.8
P31721	P31721	C1QB_RAT	C1qb	Complement C1q subcomponent subunit B	1	VAFSALR	VAFSALR	2	VAFSALR2	40456.2	30939.7	60673.8
Q75WE7	Q75WE7	VWA5A_RAT	Vwa5a	von Willebrand factor A domain-containing protein 5A	1	VAFSLQPK	VAFSLQPK	2	VAFSLQPK2	11004.6	13935.7	8727.11
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	VAFTGSTEVGHLIQVAAGSSNLK	VAFTGSTEVGHLIQVAAGSSNLK	3	VAFTGSTEVGHLIQVAAGSSNLK3	182200	153763	161118
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	VAFTGSTEVGHLIQVAAGSSNLK	VAFTGSTEVGHLIQVAAGSSNLK	4	VAFTGSTEVGHLIQVAAGSSNLK4	5262.2		3273.61
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	VAFTGSTEVGHLIQVAAGSSNLKR	VAFTGSTEVGHLIQVAAGSSNLKR	4	VAFTGSTEVGHLIQVAAGSSNLKR4	22550.5	18797.5	25021.8
Q5EGY4	Q5EGY4	YKT6_RAT	Ykt6	Synaptobrevin homolog YKT6	1	VAFTLLEK	VAFTLLEK	2	VAFTLLEK2	56556.8	36834.4	50550.6
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	VAFVNWINK	VAFVNWINK	2	VAFVNWINK2	151768	151094	141293
Q4KLZ6	Q4KLZ6	TKFC_RAT	Tkfc	Triokinase/FMN cyclase	1	VAGALAEEGMGLEEITK	VAGALAEEGMGLEEITK	2	VAGALAEEGMGLEEITK2	7832.23	2841.15	3947.63
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	VAGASASPPCQAPR	VAGASASPPC(UniMod:4)QAPR	2	VAGASASPPC(UniMod:4)QAPR2	67537.4	59557.6	46826.1
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	VAGASASPPCQAPR	VAGASASPPC(UniMod:4)QAPR	3	VAGASASPPC(UniMod:4)QAPR3	8677.1	11741.1	8845.93
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	VAGASASPPCQAPRPQLYPIPPHTQVR	VAGASASPPC(UniMod:4)QAPRPQLYPIPPHTQVR	4	VAGASASPPC(UniMod:4)QAPRPQLYPIPPHTQVR4	26067.8	40867	43045.2
A0A0U1RS29	A0A0U1RS29	A0A0U1RS29_RAT	Rgl2	Ral guanine nucleotide dissociation stimulator-like 2	1	VAGAVVSSVLGATPTGEGPR	VAGAVVSSVLGATPTGEGPR	2	VAGAVVSSVLGATPTGEGPR2	3893.1	5870.19	6311.2
A0A0U1RS29	A0A0U1RS29	A0A0U1RS29_RAT	Rgl2	Ral guanine nucleotide dissociation stimulator-like 2	1	VAGAVVSSVLGATPTGEGPR	VAGAVVSSVLGATPTGEGPR	3	VAGAVVSSVLGATPTGEGPR3	5421.38	12646.7	16382.8
Q5RJR8	Q5RJR8	LRC59_RAT	Lrrc59	Leucine-rich repeat-containing protein 59	1	VAGDCLDEK	VAGDC(UniMod:4)LDEK	2	VAGDC(UniMod:4)LDEK2	246196	250136	280824
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	VAGEDPEER	VAGEDPEER	2	VAGEDPEER2	14950.8	10515.7	11895.9
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	VAGESADPEPEPEADYYAK	VAGESADPEPEPEADYYAK	3	VAGESADPEPEPEADYYAK3	99557.4	111633	151917
B2GV22	B2GV22	PTSS2_RAT	Ptdss2	Phosphatidylserine synthase 2	1	VAGGSGSESPLLEGR	VAGGSGSESPLLEGR	2	VAGGSGSESPLLEGR2	5427.19	5848.4	5076.75
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	VAGGYPFDAYK	VAGGYPFDAYK	2	VAGGYPFDAYK2	33031.1	32607.3	31171.1
P70473	P70473	AMACR_RAT	Amacr	Alpha-methylacyl-CoA racemase	1	VAGHDINYVALSGVLSK	VAGHDINYVALSGVLSK	3	VAGHDINYVALSGVLSK3	8725.98	13002.9	11129.9
Q64591	Q64591	DECR_RAT	Decr1	2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], mitochondrial	1	VAGHPDVVINNAAGNFISPSER	VAGHPDVVINNAAGNFISPSER	3	VAGHPDVVINNAAGNFISPSER3	28206.9	19377.3	28405
Q5U211	Q5U211	SNX3_RAT	Snx3	Sorting nexin-3	1	VAGHPLAQNER	VAGHPLAQNER	3	VAGHPLAQNER3	9805.97		16282
B5DF91	B5DF91	ELAV1_RAT	Elavl1	ELAV-like protein 1	1	VAGHSLGYGFVNYVTAK	VAGHSLGYGFVNYVTAK	3	VAGHSLGYGFVNYVTAK3	12616	14098.1	22436.9
B2RYF6	B2RYF6	B2RYF6_RAT	Clptm1	CLPTM1 regulator of GABA type A receptor forward trafficking	1	VAGIFPCPTFR	VAGIFPC(UniMod:4)PTFR	2	VAGIFPC(UniMod:4)PTFR2	26448.2	38299.6	28007.8
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	VAGILTVK	VAGILTVK	2	VAGILTVK2	262461	217691	202954
D3ZN95	D3ZN95	HCFC1_RAT	Hcfc1	Host cell factor 1	1	VAGINACGR	VAGINAC(UniMod:4)GR	2	VAGINAC(UniMod:4)GR2	4753.35	7879.41	3897.46
B0K017	B0K017	B0K017_RAT	Adprs	ADP-ribosylserine hydrolase	1	VAGIPLAYHSVQDVQK	VAGIPLAYHSVQDVQK	3	VAGIPLAYHSVQDVQK3	13964.9	11847.2	10085.9
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	VAGLLNQK	VAGLLNQK	2	VAGLLNQK2	81482.5	80827.4	56001.7
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	VAGLMEDTFPGLLGLHVLR	VAGLMEDTFPGLLGLHVLR	3	VAGLMEDTFPGLLGLHVLR3	157106	196741	173567
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	VAGLMEDTFPGLLGLHVLR	VAGLMEDTFPGLLGLHVLR	4	VAGLMEDTFPGLLGLHVLR4	4214.48	3458.31	4505.02
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	VAGMAVYHGK	VAGMAVYHGK	2	VAGMAVYHGK2	45338.7	34056.5	22348.4
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	VAGMDVELTVEER	VAGMDVELTVEER	2	VAGMDVELTVEER2	96702.3	75937.6	83683.3
Q8VBX1	Q8VBX1	LIPE_RAT	Lipg	Endothelial lipase	1	VAGMLNWLQEK	VAGMLNWLQEK	2	VAGMLNWLQEK2	8983.63	11240.4	15253.7
Q62825	Q62825	EXOC3_RAT	Exoc3	Exocyst complex component 3	1	VAGMLQRPDQLDK	VAGMLQRPDQLDK	3	VAGMLQRPDQLDK3	83202.1	84799.4	77634.1
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	VAGMLQSFEGK	VAGMLQSFEGK	2	VAGMLQSFEGK2	72916.4	70314.2	79838.2
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	VAGMQETVLTVTGK	VAGMQETVLTVTGK	2	VAGMQETVLTVTGK2	16402.1	10599.6	18784.2
D3ZU83	D3ZU83	D3ZU83_RAT	Ergic3	Endoplasmic reticulum-Golgi intermediate compartment protein	1	VAGNFHFAPGK	VAGNFHFAPGK	2	VAGNFHFAPGK2	9522.01	6797.24	5222.94
D3ZU83	D3ZU83	D3ZU83_RAT	Ergic3	Endoplasmic reticulum-Golgi intermediate compartment protein	1	VAGNFHFAPGK	VAGNFHFAPGK	3	VAGNFHFAPGK3	26410	34483.9	48453.1
F6Q5K7	F6Q5K7	F6Q5K7_RAT	Mrps18b	28S ribosomal protein S18b, mitochondrial	1	VAGNPCPICR	VAGNPC(UniMod:4)PIC(UniMod:4)R	2	VAGNPC(UniMod:4)PIC(UniMod:4)R2	15189	9363.04	10847.9
A0A8I6ADA8	A0A8I6ADA8	A0A8I6ADA8_RAT	Abhd4	Abhydrolase domain containing 4, N-acyl phospholipase B	1	VAGPWGPGLVQR	VAGPWGPGLVQR	2	VAGPWGPGLVQR2	47702.2	42408.4	56413.4
P61959	Q5XIF4;P61959	SUMO2_RAT	Sumo2	Small ubiquitin-related modifier 2	0	VAGQDGSVVQFK	VAGQDGSVVQFK	2	VAGQDGSVVQFK2	65317	53115.6	47080.6
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	VAGQNSPSGIQSK	VAGQNSPSGIQSK	2	VAGQNSPSGIQSK2	1.70127e+06	1.39722e+06	1.54551e+06
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	VAGQNSPSGIQSK	VAGQNSPSGIQSK	3	VAGQNSPSGIQSK3	1891.4	7656.47	2184.46
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	VAGSPGWVR	VAGSPGWVR	2	VAGSPGWVR2	43074.9	34297.5	43706.6
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	VAGSVTELIQAAEAMK	VAGSVTELIQAAEAMK	2	VAGSVTELIQAAEAMK2	114028	94401	106630
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	VAGSVTELIQAAEAMK	VAGSVTELIQAAEAMK	3	VAGSVTELIQAAEAMK3	218048	189166	185644
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	VAGTASGTQHAGDFICTVYLEEK	VAGTASGTQHAGDFIC(UniMod:4)TVYLEEK	3	VAGTASGTQHAGDFIC(UniMod:4)TVYLEEK3	30526.1	36808	24576.6
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	VAGTGEGGLEELVEELNSGK	VAGTGEGGLEELVEELNSGK	3	VAGTGEGGLEELVEELNSGK3	113631	118186	120950
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	VAGTPSGAVFGQR	VAGTPSGAVFGQR	2	VAGTPSGAVFGQR2	78629.9	70364.8	78024.9
G3V784	G3V784	G3V784_RAT	Adpgk	ADP-dependent glucokinase	1	VAGTQACATETIDTNR	VAGTQAC(UniMod:4)ATETIDTNR	2	VAGTQAC(UniMod:4)ATETIDTNR2	1916.16	4280.35	
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	VAGVLGFAATHNLYSMDDCAHK	VAGVLGFAATHNLYSMDDC(UniMod:4)AHK	3	VAGVLGFAATHNLYSMDDC(UniMod:4)AHK3	11290.3		5733.65
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	VAGVLGFAATHNLYSMDDCAHK	VAGVLGFAATHNLYSMDDC(UniMod:4)AHK	4	VAGVLGFAATHNLYSMDDC(UniMod:4)AHK4	22572	23151.5	28205.3
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	VAGYAAQLEQYQK	VAGYAAQLEQYQK	2	VAGYAAQLEQYQK2	312582	240010	282643
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	VAGYAAQLEQYQK	VAGYAAQLEQYQK	3	VAGYAAQLEQYQK3	10030.6	15905.1	12939.7
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	VAHFLEK	VAHFLEK	1	VAHFLEK1	3198.76	5081.62	666.451
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	VAHFLEK	VAHFLEK	2	VAHFLEK2	10059.8	19634.5	15701.4
P35738	P35738	ODBB_RAT	Bckdhb	2-oxoisovalerate dehydrogenase subunit beta, mitochondrial	1	VAHFTFQPDPESLQYGQTQK	VAHFTFQPDPESLQYGQTQK	3	VAHFTFQPDPESLQYGQTQK3	10790.4	3933.77	13931.6
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	VAHGINSGVEHAGK	VAHGINSGVEHAGK	2	VAHGINSGVEHAGK2	2836.2		4934.71
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	VAHGINSGVEHAGK	VAHGINSGVEHAGK	3	VAHGINSGVEHAGK3	14345.3		11518.3
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	VAHGVQTGVNQAGK	VAHGVQTGVNQAGK	2	VAHGVQTGVNQAGK2	33845.6	37560.6	28827.4
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	VAHGVQTGVNQAGK	VAHGVQTGVNQAGK	3	VAHGVQTGVNQAGK3	152969	148658	171817
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	VAHHLTGAIHGDNVK	VAHHLTGAIHGDNVK	4	VAHHLTGAIHGDNVK4	5432.98	7229.4	6048.38
Q4V8F9	Q4V8F9	HSDL2_RAT	Hsdl2	Hydroxysteroid dehydrogenase-like protein 2	1	VAHILNLSPPLNLNPMWFK	VAHILNLSPPLNLNPMWFK	3	VAHILNLSPPLNLNPMWFK3	18561.7	9289.92	11104.7
O88321	O88321	O88321_RAT	Psmd4	26S proteasome non-ATPase regulatory subunit 4	1	VAHLALK	VAHLALK	1	VAHLALK1	2635.98		
A0A096MJF9	A0A096MJF9	A0A096MJF9_RAT	Tmem132e	Transmembrane protein 132E	1	VAHLVDSNTLAGLEPGTTPFK	VAHLVDSNTLAGLEPGTTPFK	3	VAHLVDSNTLAGLEPGTTPFK3	12194.9	8573.68	12526.8
P17945	P17945	HGF_RAT	Hgf	Hepatocyte growth factor	1	VAHLYIMGNEK	VAHLYIMGNEK	3	VAHLYIMGNEK3	8566.75	3629.57	4979.27
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	VAHMEFCYQELCQLAAER	VAHMEFC(UniMod:4)YQELC(UniMod:4)QLAAER	3	VAHMEFC(UniMod:4)YQELC(UniMod:4)QLAAER3	61290.8	39309.7	48722.2
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	VAHMEFCYQELCQLAAERR	VAHMEFC(UniMod:4)YQELC(UniMod:4)QLAAERR	4	VAHMEFC(UniMod:4)YQELC(UniMod:4)QLAAERR4	6506.28	10670.2	15897.8
E9PT90	E9PT90	E9PT90_RAT	Spart	Spartin	1	VAHNILSGASWVSWGLVK	VAHNILSGASWVSWGLVK	3	VAHNILSGASWVSWGLVK3	17297.2	10978.8	11252.7
Q4AEG0	Q4AEG0	Q4AEG0_RAT	Gp9	Glycoprotein 9	1	VAHNPWHCDCSLTYLR	VAHNPWHC(UniMod:4)DC(UniMod:4)SLTYLR	3	VAHNPWHC(UniMod:4)DC(UniMod:4)SLTYLR3	578817	696323	585346
Q4AEG0	Q4AEG0	Q4AEG0_RAT	Gp9	Glycoprotein 9	1	VAHNPWHCDCSLTYLR	VAHNPWHC(UniMod:4)DC(UniMod:4)SLTYLR	4	VAHNPWHC(UniMod:4)DC(UniMod:4)SLTYLR4	1.85892e+06	2.50113e+06	2.27355e+06
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	VAHQLQALR	VAHQLQALR	2	VAHQLQALR2	36381.8	48126.1	23562.2
P10354	P10354	CMGA_RAT	Chga	Chromogranin-A	1	VAHQLQALRR	VAHQLQALRR	3	VAHQLQALRR3	29827.2	40727.7	36330
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	VAHSDDGVQWTVYEEQGTSK	VAHSDDGVQWTVYEEQGTSK	3	VAHSDDGVQWTVYEEQGTSK3	42191.6	50745.7	46523.1
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	VAHSDKPGSTSAVSFR	VAHSDKPGSTSAVSFR	2	VAHSDKPGSTSAVSFR2	9494.94	10774.9	6680.92
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	VAHSDKPGSTSAVSFR	VAHSDKPGSTSAVSFR	3	VAHSDKPGSTSAVSFR3	108790	119202	83829.5
Q9Z270	Q9Z270	VAPA_RAT	Vapa	Vesicle-associated membrane protein-associated protein A	1	VAHSDKPGSTSAVSFR	VAHSDKPGSTSAVSFR	4	VAHSDKPGSTSAVSFR4	147082	145617	200910
Q6AYD3	Q6AYD3	PA2G4_RAT	Pa2g4	Proliferation-associated protein 2G4	1	VAHSFNCTPIEGMLSHQLK	VAHSFNC(UniMod:4)TPIEGMLSHQLK	3	VAHSFNC(UniMod:4)TPIEGMLSHQLK3	3471.99	4506.92	4881.94
Q6AYD3	Q6AYD3	PA2G4_RAT	Pa2g4	Proliferation-associated protein 2G4	1	VAHSFNCTPIEGMLSHQLK	VAHSFNC(UniMod:4)TPIEGMLSHQLK	4	VAHSFNC(UniMod:4)TPIEGMLSHQLK4	53793.6	36381.4	34626.2
A0A8I6ABE7	A0A8I6ABE7	A0A8I6ABE7_RAT	Xpr1	Xenotropic and polytropic retrovirus receptor 1	1	VAHVEVAPFYICK	VAHVEVAPFYIC(UniMod:4)K	3	VAHVEVAPFYIC(UniMod:4)K3	8891.09	4944.75	4277.32
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	VAHVGFGVVLGEDKK	VAHVGFGVVLGEDKK	3	VAHVGFGVVLGEDKK3	10188.7	4876.39	6503.67
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	VAHVGFGVVLGEDKK	VAHVGFGVVLGEDKK	4	VAHVGFGVVLGEDKK4	20642	23130.9	19586
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	VAIAQFSDDVR	VAIAQFSDDVR	2	VAIAQFSDDVR2	26136.7	35160.4	41295.6
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	VAIDETWDSQSVSPWWQQMR	VAIDETWDSQSVSPWWQQMR	3	VAIDETWDSQSVSPWWQQMR3	12121.7	20568.2	20694.9
Q5M7T7	Q5M7T7	Q5M7T7_RAT	Pla2g7	Phospholipase A2 group VII	1	VAIDLTNK	VAIDLTNK	2	VAIDLTNK2	240740	220283	209011
P07943	P07943;A0A8I6A068	ALDR_RAT	Akr1b1	Aldo-keto reductase family 1 member B1	0	VAIDMGYR	VAIDMGYR	2	VAIDMGYR2	28972.5	23164.6	31376.2
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	VAIEWPGAYPK	VAIEWPGAYPK	2	VAIEWPGAYPK2	13899.6	24554.2	27857.1
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	VAIFFSNQPTKPSLQLR	VAIFFSNQPTKPSLQLR	3	VAIFFSNQPTKPSLQLR3	13372.2	10323.9	13300.4
F1LVV4	F1LVV4	F1LVV4_RAT	Rcc2	Regulator of chromosome condensation 2	1	VAIFIEK	VAIFIEK	2	VAIFIEK2	5643.39	7872.41	4966.16
Q5XI42	A0A8I6ACF4;A0A8I6AW67;Q5XI42;A0A8I6AKN2	AL3B1_RAT	Aldh3b1	Aldehyde dehydrogenase family 3 member B1	0	VAIGGQSDEGER	VAIGGQSDEGER	2	VAIGGQSDEGER2	6026.69	5342.72	8407.82
D3ZVY9	D3ZVY9	D3ZVY9_RAT	Gng14	Guanine nucleotide-binding protein subunit gamma	1	VAIGSDIGQAR	VAIGSDIGQAR	2	VAIGSDIGQAR2	16098.2	5753.76	8571.85
Q3SWS8	Q3SWS8	RAE1L_RAT	Rae1	mRNA export factor	1	VAIHYINPPNPAK	VAIHYINPPNPAK	3	VAIHYINPPNPAK3	16637.5	18331	26464.4
Q07969	Q07969	CD36_RAT	Cd36	Platelet glycoprotein 4	1	VAIIDTYK	VAIIDTYK	2	VAIIDTYK2	57602.3	49125.9	61396.4
A0A0G2K3K5	A0A0G2K3K5	A0A0G2K3K5_RAT	B4galt5	Beta-1,4-galactosyltransferase	1	VAILIPFR	VAILIPFR	2	VAILIPFR2	25759.7	29162.2	19356.4
D3ZCJ3	D3ZCJ3	D3ZCJ3_RAT	Mfsd6	Major facilitator superfamily domain containing 6	1	VAILTDDEEEQK	VAILTDDEEEQK	2	VAILTDDEEEQK2	112686	102438	80440.3
P09330	P09330;A0A0G2JSV3;P60892	PRPS2_RAT	Prps2	Ribose-phosphate pyrophosphokinase 2	0	VAILVDDMADTCGTICHAADK	VAILVDDMADTC(UniMod:4)GTIC(UniMod:4)HAADK	3	VAILVDDMADTC(UniMod:4)GTIC(UniMod:4)HAADK3	43822.2	19556.9	28580.1
B5DF86	B5DF86	B5DF86_RAT	Cog8	Conserved oligomeric Golgi complex subunit 8	1	VAINTFQK	VAINTFQK	2	VAINTFQK2	21846.9	28430.1	29683.2
D4ABL6	D4ABL6	MCTP1_RAT	Mctp1	Multiple C2 and transmembrane domain-containing protein 1	1	VAIPLLSIQNGEQK	VAIPLLSIQNGEQK	2	VAIPLLSIQNGEQK2	8888.14	6505.78	9184.37
P53534	P53534	PYGB_RAT	Pygb	Glycogen phosphorylase, brain form (Fragment)	1	VAIQLNDTHPALSIPELMR	VAIQLNDTHPALSIPELMR	3	VAIQLNDTHPALSIPELMR3	24406.2	38550.2	24348.6
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	VAIQPVNDHAPVQTISR	VAIQPVNDHAPVQTISR	2	VAIQPVNDHAPVQTISR2	7458.64	6773.17	5536.21
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	VAIQPVNDHAPVQTISR	VAIQPVNDHAPVQTISR	3	VAIQPVNDHAPVQTISR3	162884	199711	150090
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	VAIQTMEANDFTATVACFMR	VAIQTMEANDFTATVAC(UniMod:4)FMR	3	VAIQTMEANDFTATVAC(UniMod:4)FMR3		4368.86	8504.64
Q704E8	Q704E8	ABCB7_RAT	Abcb7	Iron-sulfur clusters transporter ABCB7, mitochondrial	1	VAISLGFLGGAK	VAISLGFLGGAK	2	VAISLGFLGGAK2	14763	17437.2	15380.5
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	VAITVPAPQLGR	VAITVPAPQLGR	2	VAITVPAPQLGR2	37479.5	48533.2	36597.6
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	VAIVEELVVGYETSLK	VAIVEELVVGYETSLK	2	VAIVEELVVGYETSLK2	3054.59		3902.26
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	VAIVEELVVGYETSLK	VAIVEELVVGYETSLK	3	VAIVEELVVGYETSLK3	6852.64	5431.24	6541.89
Q704E8	Q704E8	ABCB7_RAT	Abcb7	Iron-sulfur clusters transporter ABCB7, mitochondrial	1	VAIVGGSGSGK	VAIVGGSGSGK	2	VAIVGGSGSGK2	37002.5	32249	37946.6
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	VAIVKPGVPMEIVLNK	VAIVKPGVPMEIVLNK	2	VAIVKPGVPMEIVLNK2	60905.8	48389.1	38763.2
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	VAIVKPGVPMEIVLNK	VAIVKPGVPMEIVLNK	3	VAIVKPGVPMEIVLNK3	733324	855972	781193
Q8R508	Q8R508	FAT3_RAT	Fat3	Protocadherin Fat 3	1	VAIVNAVGNR	VAIVNAVGNR	2	VAIVNAVGNR2	4156.94		3568.21
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	VAIVTFSSK	VAIVTFSSK	2	VAIVTFSSK2	110136	121506	122061
Q6TUD3	Q6TUD3	Q6TUD3_RAT	Rdh11	LRRGT00111	1	VAIVTGANTGIGK	VAIVTGANTGIGK	2	VAIVTGANTGIGK2	66844.4	71114.6	64031.9
A0A8J8YGQ6	A0A8J8YGQ6	A0A8J8YGQ6_RAT	Dhrsx	Dehydrogenase/reductase X-linked	1	VAIVTGATR	VAIVTGATR	2	VAIVTGATR2	29005.1	33108.6	32581
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	VAIYLCR	VAIYLC(UniMod:4)R	2	VAIYLC(UniMod:4)R2	85466.7	54974.1	38900
A0A0G2K059	A0A0G2K059	A0A0G2K059_RAT	Mcu	Calcium uniporter protein	1	VAIYSPDGVR	VAIYSPDGVR	2	VAIYSPDGVR2	549590	470398	506708
A0A8I6AVZ7	A0A8I6A680;A0A8I6AVZ7	A0A8I6AVZ7_RAT	Mtcl1	Microtubule crosslinking factor 1	0	VAKDVSVR	VAKDVSVR	2	VAKDVSVR2	2429.29		
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	VAKGDVNDNFQGVLQNVR	VAKGDVNDNFQGVLQNVR	3	VAKGDVNDNFQGVLQNVR3		4910.49	2005.62
D4A9N5	D4A9N5	D4A9N5_RAT	Trim25	Tripartite motif-containing 25	1	VALADNYTTASVADGLQHYR	VALADNYTTASVADGLQHYR	3	VALADNYTTASVADGLQHYR3		3479.49	4260.67
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	VALAEACR	VALAEAC(UniMod:4)R	2	VALAEAC(UniMod:4)R2	158762	142736	161904
Q5PPL3	Q5PPL3	NSDHL_RAT	Nsdhl	Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating	1	VALAGTFHYYSCEK	VALAGTFHYYSC(UniMod:4)EK	3	VALAGTFHYYSC(UniMod:4)EK3	7030.83	11816.6	13349.7
F1MAL5	F1MAL5	F1MAL5_RAT	Irs2	Insulin receptor substrate 2	1	VALAPAGGALQHSR	VALAPAGGALQHSR	3	VALAPAGGALQHSR3	9871.14	16580.9	8490.47
A0A0G2JTX7	A0A0G2JTX7;D3ZL10	A0A0G2JTX7_RAT	Col6a5	Collagen type VI alpha 5 chain	0	VALAQYSDALHNEFHLGAFK	VALAQYSDALHNEFHLGAFK	4	VALAQYSDALHNEFHLGAFK4	8626.77	6839.77	507.621
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	VALDCIK	VALDC(UniMod:4)IK	2	VALDC(UniMod:4)IK2	7024.77	46611.4	13255.5
P60192	P60192	SNAPN_RAT	Snapin	SNARE-associated protein Snapin	1	VALDLDPYVK	VALDLDPYVK	2	VALDLDPYVK2	37053.6	46190.6	50640.3
P60192	P60192	SNAPN_RAT	Snapin	SNARE-associated protein Snapin	1	VALDLDPYVKK	VALDLDPYVKK	3	VALDLDPYVKK3	3047.91	3877.51	7947.29
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	VALDMTTLTIMR	VALDMTTLTIMR	2	VALDMTTLTIMR2	62418.8	62005.4	61942.7
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	VALDSWQTLALSSVIIDPSIK	VALDSWQTLALSSVIIDPSIK	3	VALDSWQTLALSSVIIDPSIK3	1689.83	2167.58	3509.99
G3V8G1	G3V8G1	G3V8G1_RAT	Agtpbp1	tubulin-glutamate carboxypeptidase	1	VALDTLAALLK	VALDTLAALLK	2	VALDTLAALLK2	2877.7	3504.49	5027.54
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	VALEEMENKPR	VALEEMENKPR	3	VALEEMENKPR3	3070.43	12669.2	9961.77
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	VALEGLRPTIPPGISPHVCK	VALEGLRPTIPPGISPHVC(UniMod:4)K	3	VALEGLRPTIPPGISPHVC(UniMod:4)K3	129126	91304.5	82299
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	VALEGLRPTIPPGISPHVCK	VALEGLRPTIPPGISPHVC(UniMod:4)K	4	VALEGLRPTIPPGISPHVC(UniMod:4)K4	1.059e+06	983567	1.01435e+06
A0A8I6ATU9	A0A8I6ATU9	A0A8I6ATU9_RAT	Atxn2	Ataxin 2	1	VALENDDRSEEEK	VALENDDRSEEEK	3	VALENDDRSEEEK3	23452.8	13529.4	19895.2
Q5XI59	Q5XI59	RNF10_RAT	Rnf10	E3 ubiquitin-protein ligase RNF10	1	VALEQQLAEEK	VALEQQLAEEK	2	VALEQQLAEEK2		3779.12	5552.09
A0A8I5ZTH4	A0A0G2K749;A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	0	VALESLYR	VALESLYR	2	VALESLYR2	81948.8	96577.2	80625.3
D4A3W2	D4A3W2	D4A3W2_RAT	Crb2	Crumbs cell polarity complex component 2	1	VALGDLPLPLAPPR	VALGDLPLPLAPPR	2	VALGDLPLPLAPPR2	7390.58	9363.64	8316.92
Q05701	Q05701	BPIB3_RAT	Bpifb3	BPI fold-containing family B member 3	1	VALGMSPR	VALGMSPR	2	VALGMSPR2	9456.31	11653.2	
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	VALGNEEGLFVVHVTK	VALGNEEGLFVVHVTK	3	VALGNEEGLFVVHVTK3	14496.3	16502	12819.4
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	VALGNHSADLDPGDTVTEK	VALGNHSADLDPGDTVTEK	3	VALGNHSADLDPGDTVTEK3	40543	51999	49892
D4A5Q2	D4A5Q2	D4A5Q2_RAT	Smc2	Structural maintenance of chromosomes protein	1	VALGNTWK	VALGNTWK	2	VALGNTWK2		12615.7	7269.79
B5DF57	B5DF57	B5DF57_RAT	Epb42	protein-glutamine gamma-glutamyltransferase	1	VALIAQTGEQPSK	VALIAQTGEQPSK	2	VALIAQTGEQPSK2	20648.5	11682.7	17991.5
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	VALIGFPSVGK	VALIGFPSVGK	2	VALIGFPSVGK2	113299	90681.4	107257
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	VALIGSPVDLTYR	VALIGSPVDLTYR	2	VALIGSPVDLTYR2	84204.8	87167.4	86839.4
A0A8I6AC38	A0A8I6AC38	A0A8I6AC38_RAT	Wnk2	non-specific serine/threonine protein kinase	1	VALIQWR	VALIQWR	2	VALIQWR2	1931.03		5359.77
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	VALLEDVNR	VALLEDVNR	2	VALLEDVNR2	70320.8	56197.9	69774.4
F1LN92	F1LN92;F1LM42	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	0	VALLLLEK	VALLLLEK	2	VALLLLEK2	24848.1	27382.2	30725.5
Q4KLZ6	Q4KLZ6	TKFC_RAT	Tkfc	Triokinase/FMN cyclase	1	VALLSGGGSGHEPAHAGFIGK	VALLSGGGSGHEPAHAGFIGK	3	VALLSGGGSGHEPAHAGFIGK3	7536.99		
Q4KLZ6	Q4KLZ6	TKFC_RAT	Tkfc	Triokinase/FMN cyclase	1	VALLSGGGSGHEPAHAGFIGK	VALLSGGGSGHEPAHAGFIGK	4	VALLSGGGSGHEPAHAGFIGK4	24093	11339.7	16260
A0A0G2JTX7	A0A0G2JTX7	A0A0G2JTX7_RAT	Col6a5	Collagen type VI alpha 5 chain	1	VALLSYSPSENSR	VALLSYSPSENSR	2	VALLSYSPSENSR2	8359.41	8645.35	7519
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	VALMGGSHGGFLSCHLIGQYPETYSACIAR	VALMGGSHGGFLSC(UniMod:4)HLIGQYPETYSAC(UniMod:4)IAR	4	VALMGGSHGGFLSC(UniMod:4)HLIGQYPETYSAC(UniMod:4)IAR4	78516.7	47089.6	93548.5
Q8K4V4	Q8K4V4	SNX27_RAT	Snx27	Sorting nexin-27	1	VALPDGATVTVR	VALPDGATVTVR	2	VALPDGATVTVR2	26357.3	36994.2	31812.9
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	VALPELVR	VALPELVR	2	VALPELVR2	700070	750207	682276
P11915	P11915	SCP2_RAT	Scp2	Sterol carrier protein 2	1	VALQHNLGLGGAAVVTLYR	VALQHNLGLGGAAVVTLYR	3	VALQHNLGLGGAAVVTLYR3	3935.83		
A0A8I6GK73	A0A8I6GK73	A0A8I6GK73_RAT	Copz1	Coatomer subunit zeta	1	VALRGEDVPLTEQTVSQVLQSAK	VALRGEDVPLTEQTVSQVLQSAK	3	VALRGEDVPLTEQTVSQVLQSAK3	127101	133890	189888
D3ZRB3	D3ZRB3	D3ZRB3_RAT	Rhof	Ras homolog family member F, filopodia associated	1	VALSALKK	VALSALKK	2	VALSALKK2	3746.15	5404.02	4878.45
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	VALSNMNVIDR	VALSNMNVIDR	2	VALSNMNVIDR2	20288.1	18581.5	14408.2
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	VALSPAGVQALVK	VALSPAGVQALVK	2	VALSPAGVQALVK2	116897	112796	110840
M0RBQ8	M0RBQ8	M0RBQ8_RAT	Dennd1c	DENN/MADD domain containing 1C	1	VALSPGEGVSR	VALSPGEGVSR	2	VALSPGEGVSR2	5829.44	2767.98	6892.75
P08689	P08689	SHBG_RAT	Shbg	Sex hormone-binding globulin	1	VALSQGPK	VALSQGPK	2	VALSQGPK2	53881	52955.7	49870.5
A0A8I6AQN7	A0A8I6AQN7	A0A8I6AQN7_RAT	Fcamr	Fc fragment of IgA and IgM receptor	1	VALTDVPQSGLFMVR	VALTDVPQSGLFMVR	2	VALTDVPQSGLFMVR2	12253.4	17690	
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	VALTGLTVAEYFR	VALTGLTVAEYFR	2	VALTGLTVAEYFR2	231437	175497	220050
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	VALTGLTVAEYFR	VALTGLTVAEYFR	3	VALTGLTVAEYFR3	25427.2	20195.6	23359.5
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	VALTIALFHVAGK	VALTIALFHVAGK	3	VALTIALFHVAGK3	2947.76		3436.14
A0A0G2K762	A0A0G2K762	A0A0G2K762_RAT	Abcf2	ATP binding cassette subfamily F member 2	1	VALVGPNGAGK	VALVGPNGAGK	2	VALVGPNGAGK2	9392.49	6142.91	7131.39
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	VALVQYSDR	VALVQYSDR	2	VALVQYSDR2	28754	27354.4	17035.8
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	VALVSSASDAPLR	VALVSSASDAPLR	2	VALVSSASDAPLR2	71905.3	52975.9	39742.1
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	VALVSSASDAPLRGPEISVPADLDK	VALVSSASDAPLRGPEISVPADLDK	3	VALVSSASDAPLRGPEISVPADLDK3	159009	181000	148445
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	VALVTFNSAAHNKPSLIR	VALVTFNSAAHNKPSLIR	3	VALVTFNSAAHNKPSLIR3	91152.4	148238	112330
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	VALVTFNSAAHNKPSLIR	VALVTFNSAAHNKPSLIR	4	VALVTFNSAAHNKPSLIR4	343009	412130	416094
Q08850	Q08850	STX4_RAT	Stx4	Syntaxin-4	1	VALVVHSGAAR	VALVVHSGAAR	2	VALVVHSGAAR2	2427.32	8979.98	
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	VALVYGQMNEPPGAR	VALVYGQMNEPPGAR	2	VALVYGQMNEPPGAR2	1.15695e+06	1.15433e+06	1.16757e+06
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	VALVYGQMNEPPGAR	VALVYGQMNEPPGAR	3	VALVYGQMNEPPGAR3	274797	289122	291420
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	VALWNEVDGQTK	VALWNEVDGQTK	2	VALWNEVDGQTK2	125332	162421	152075
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VALYPDLGEPNYILNIK	VALYPDLGEPNYILNIK	2	VALYPDLGEPNYILNIK2	702048	864244	880167
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VALYPDLGEPNYILNIK	VALYPDLGEPNYILNIK	3	VALYPDLGEPNYILNIK3	132116	192598	186694
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VALYPDLGEPNYILNIKR	VALYPDLGEPNYILNIKR	3	VALYPDLGEPNYILNIKR3	218065	304715	324134
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	VAMANIQPQMLVAGATSIAR	VAMANIQPQMLVAGATSIAR	3	VAMANIQPQMLVAGATSIAR3	617716	609634	664894
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	VAMCHMIYR	VAMC(UniMod:4)HMIYR	3	VAMC(UniMod:4)HMIYR3	1835.78	1749.26	3232.13
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	VAMCVLSSPHGR	VAMC(UniMod:4)VLSSPHGR	3	VAMC(UniMod:4)VLSSPHGR3	20143.1	28811.2	25263.5
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	VAMETINPR	VAMETINPR	2	VAMETINPR2	17952.9	19578.7	11081.2
Q9WVM4	Q9WVM4	ICMT_RAT	Icmt	Protein-S-isoprenylcysteine O-methyltransferase	1	VAMFTAGSNFNHVVQSEK	VAMFTAGSNFNHVVQSEK	3	VAMFTAGSNFNHVVQSEK3	8121.4	5554.45	11347.1
D3ZHA1	D3ZHA1	D3ZHA1_RAT	B4gat1	Beta-1,4-glucuronyltransferase 1	1	VAMHLVCPSR	VAMHLVC(UniMod:4)PSR	3	VAMHLVC(UniMod:4)PSR3	11918.2	11543.9	7687.69
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	VAMIDETK	VAMIDETK	2	VAMIDETK2	76477.4	86153.8	110696
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	VAMKHPSAVTACNLDLENLVTDSNR	VAMKHPSAVTAC(UniMod:4)NLDLENLVTDSNR	4	VAMKHPSAVTAC(UniMod:4)NLDLENLVTDSNR4	5038.99	4532.01	4261.56
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	VAMNILNSGR	VAMNILNSGR	2	VAMNILNSGR2	40167.2	61488.6	76602.2
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	VAMNVYELSSAAGLPCEIDPALVVALSSQK	VAMNVYELSSAAGLPC(UniMod:4)EIDPALVVALSSQK	4	VAMNVYELSSAAGLPC(UniMod:4)EIDPALVVALSSQK4	3100.89	3041.63	3654.69
D3ZHZ3	D3ZHZ3	D3ZHZ3_RAT	Osbpl3	Oxysterol-binding protein	1	VAMPVELNEPLNTLQR	VAMPVELNEPLNTLQR	2	VAMPVELNEPLNTLQR2		7567.03	11762.8
D3ZHZ3	D3ZHZ3	D3ZHZ3_RAT	Osbpl3	Oxysterol-binding protein	1	VAMPVELNEPLNTLQR	VAMPVELNEPLNTLQR	3	VAMPVELNEPLNTLQR3	3358.28		4836.69
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	VAMQDATAQMAMLQFISSGLPK	VAMQDATAQMAMLQFISSGLPK	3	VAMQDATAQMAMLQFISSGLPK3	18228.9	21483.4	28140.6
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	VAMSHFEPSEYIR	VAMSHFEPSEYIR	2	VAMSHFEPSEYIR2	12288.3	16391.5	10057.1
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	VAMSHFEPSEYIR	VAMSHFEPSEYIR	3	VAMSHFEPSEYIR3	219246	203066	230749
Q5U204	Q5U204	LTOR3_RAT	Lamtor3	Ragulator complex protein LAMTOR3	1	VANDSAPEHALRPGFLSTFALATDQGSK	VANDSAPEHALRPGFLSTFALATDQGSK	3	VANDSAPEHALRPGFLSTFALATDQGSK3	3309.58		
Q5U204	Q5U204	LTOR3_RAT	Lamtor3	Ragulator complex protein LAMTOR3	1	VANDSAPEHALRPGFLSTFALATDQGSK	VANDSAPEHALRPGFLSTFALATDQGSK	4	VANDSAPEHALRPGFLSTFALATDQGSK4	50890.4	43998.5	50387.8
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	VANEAEFILSR	VANEAEFILSR	2	VANEAEFILSR2	35505.9	29882.9	33033.4
P51886	P51886	LUM_RAT	Lum	Lumican	1	VANEITVN	VANEITVN	1	VANEITVN1	4.22138e+06	4.46809e+06	4.89988e+06
P51886	P51886	LUM_RAT	Lum	Lumican	1	VANEITVN	VANEITVN	2	VANEITVN2	892096	1.06496e+06	1.26032e+06
Q5M880	Q5M880	S66A2_RAT	Slc66a2	Solute carrier family 66 member 2	1	VANELNVK	VANELNVK	2	VANELNVK2	48577.1	55032.3	36130.3
P0C2X9	P0C2X9	AL4A1_RAT	Aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1	VANEPILAFTQGSPER	VANEPILAFTQGSPER	2	VANEPILAFTQGSPER2	95034.6	100970	106834
P0C2X9	P0C2X9	AL4A1_RAT	Aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1	VANEPILAFTQGSPER	VANEPILAFTQGSPER	3	VANEPILAFTQGSPER3	14299.6	10579.2	18837.5
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	VANHMDGFQR	VANHMDGFQR	2	VANHMDGFQR2	34422.9	30528.9	37021.1
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	VANHMDGFQR	VANHMDGFQR	3	VANHMDGFQR3	461608	446275	491799
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	VANILINLYGMTAVLSR	VANILINLYGMTAVLSR	3	VANILINLYGMTAVLSR3	5253.39		
Q9WTQ0	Q9WTQ0;P09215	KPCT_RAT	Prkcq	Protein kinase C theta type	0	VANLCGINQK	VANLC(UniMod:4)GINQK	2	VANLC(UniMod:4)GINQK2	187338	194180	180784
A0A0G2JVT8	A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	1	VANLHLPSHYEEK	VANLHLPSHYEEK	3	VANLHLPSHYEEK3	6479.57	5147.31	
A0A0G2JVT8	A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	1	VANLHLPSHYEEK	VANLHLPSHYEEK	4	VANLHLPSHYEEK4	4643.24	3074.34	7501.13
A0A1B0GWT7	A0A1B0GWT7	A0A1B0GWT7_RAT	Lamtor2	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2	1	VANLLLCMYAK	VANLLLC(UniMod:4)MYAK	2	VANLLLC(UniMod:4)MYAK2	22793.5	20627.3	12815.5
Q5U2V4	Q5U2V4	PLBL1_RAT	Plbd1	Phospholipase B-like 1	1	VANMMAQGGK	VANMMAQGGK	2	VANMMAQGGK2	4994.86	5479.97	6324.23
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	VANPAKS	VANPAKS	1	VANPAKS1			244441
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VANPSGNLTDTYVQDCGDGTYK	VANPSGNLTDTYVQDC(UniMod:4)GDGTYK	3	VANPSGNLTDTYVQDC(UniMod:4)GDGTYK3	1.84086e+06	1.74966e+06	2.20095e+06
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	VANQIKEEEEK	VANQIKEEEEK	2	VANQIKEEEEK2	3681.66	6094.96	4236.38
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	VANQIKEEEEK	VANQIKEEEEK	3	VANQIKEEEEK3	51825.9	49894.2	49088.3
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	VANQLDKDHAK	VANQLDKDHAK	2	VANQLDKDHAK2			3018.22
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	VANSGITR	VANSGITR	2	VANSGITR2	458000	486236	491273
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	VANVELYYK	VANVELYYK	2	VANVELYYK2	166610	158573	142134
P62268	F1LTW8;D4A9Q3;P62268	RS23_RAT	Rps23	Small ribosomal subunit protein uS12	0	VANVSLLALYK	VANVSLLALYK	2	VANVSLLALYK2	32367.9	43062.8	24793.1
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	VAPADGFSDLAMQVMTSPSK	VAPADGFSDLAMQVMTSPSK	3	VAPADGFSDLAMQVMTSPSK3	8236.71	5851.14	8535.06
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	VAPADPPK	VAPADPPK	2	VAPADPPK2	354585	205497	
D3ZUV2	D3ZUV2	D3ZUV2_RAT	Mib1	RING-type E3 ubiquitin transferase	1	VAPAGSTISNASGER	VAPAGSTISNASGER	2	VAPAGSTISNASGER2	17986.1	18183.3	19578.5
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	VAPAPARPSGPSK	VAPAPARPSGPSK	2	VAPAPARPSGPSK2	11404.3	32141.2	15948.8
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	VAPAPARPSGPSK	VAPAPARPSGPSK	3	VAPAPARPSGPSK3	143601	546809	187263
P62425	F1M1M2;P62425;D3ZU22;D3ZJH5;A0A8I6AMN7;D3ZPL5;D3ZNA3;F1M2Q3;D4A6B9	RL7A_RAT	Rpl7a	Large ribosomal subunit protein eL8	0	VAPAPAVVK	VAPAPAVVK	2	VAPAPAVVK2	53571.9	59081.8	49252
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	VAPARPPPKPR	VAPARPPPKPR	3	VAPARPPPKPR3			24830.8
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	VAPDAEAHR	VAPDAEAHR	2	VAPDAEAHR2			3816.16
D3ZRN3	D3ZRN3	D3ZRN3_RAT	Actbl2	Actin, beta-like 2	1	VAPDEHPILLTEAPLNPK	VAPDEHPILLTEAPLNPK	3	VAPDEHPILLTEAPLNPK3	22398.8		
Q6AYS7	Q6AYS7	ACY1A_RAT	Acy1a	Aminoacylase-1A	1	VAPDVDMK	VAPDVDMK	2	VAPDVDMK2	6699.22		7006.53
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	VAPEDEGDYVCEVQDR	VAPEDEGDYVC(UniMod:4)EVQDR	2	VAPEDEGDYVC(UniMod:4)EVQDR2	400656	451950	396295
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	VAPEDEGDYVCEVQDR	VAPEDEGDYVC(UniMod:4)EVQDR	3	VAPEDEGDYVC(UniMod:4)EVQDR3	43322.9	68286.6	67761.9
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	VAPEDEGDYVCEVQDRR	VAPEDEGDYVC(UniMod:4)EVQDRR	3	VAPEDEGDYVC(UniMod:4)EVQDRR3	386406	362953	310458
P68136	P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	VAPEEHPTLLTEAPLNPK	VAPEEHPTLLTEAPLNPK	3	VAPEEHPTLLTEAPLNPK3	113318	104253	105196
P60711	P60711;P63259;A0A8I5Y704	ACTB_RAT	Actb	Actin, cytoplasmic 1	0	VAPEEHPVLLTEAPLNPK	VAPEEHPVLLTEAPLNPK	2	VAPEEHPVLLTEAPLNPK2	5.68352e+06	5.30435e+06	5.28092e+06
P60711	P60711;P63259;A0A8I5Y704	ACTB_RAT	Actb	Actin, cytoplasmic 1	0	VAPEEHPVLLTEAPLNPK	VAPEEHPVLLTEAPLNPK	3	VAPEEHPVLLTEAPLNPK3	2.79455e+07	2.78908e+07	3.00188e+07
P60711	P60711;P63259;A0A8I5Y704	ACTB_RAT	Actb	Actin, cytoplasmic 1	0	VAPEEHPVLLTEAPLNPK	VAPEEHPVLLTEAPLNPK	4	VAPEEHPVLLTEAPLNPK4	161594	168815	178617
P60711	P60711;P63259;A0A8I5Y704	ACTB_RAT	Actb	Actin, cytoplasmic 1	0	VAPEEHPVLLTEAPLNPKANR	VAPEEHPVLLTEAPLNPKANR	4	VAPEEHPVLLTEAPLNPKANR4		5181.8	
Q5XI22	A0A0G2JUB4;Q5XI22	THIC_RAT	Acat2	Acetyl-CoA acetyltransferase, cytosolic	0	VAPEEVSEVIFGHVLTAGCGQNPTR	VAPEEVSEVIFGHVLTAGC(UniMod:4)GQNPTR	3	VAPEEVSEVIFGHVLTAGC(UniMod:4)GQNPTR3	6889.12	8380.3	16361.1
D4A3V6	D4A3V6	D4A3V6_RAT	Bloc1s3	Biogenesis of lysosome-related organelles complex 1 subunit 3	1	VAPGDLPPLVVQR	VAPGDLPPLVVQR	2	VAPGDLPPLVVQR2	40573.9	30006.2	32283
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	VAPGPSSGSTPGQAPGSSALSSPR	VAPGPSSGSTPGQAPGSSALSSPR	3	VAPGPSSGSTPGQAPGSSALSSPR3	15202.4	12110.7	14190.2
A0A8I5ZYN9	A0A8I5ZYN9	A0A8I5ZYN9_RAT	Ipo11-ps1	Similar to importin 11	1	VAPHALSEEEK	VAPHALSEEEK	2	VAPHALSEEEK2	8315.43	9848.02	
A0A8I5ZYN9	A0A8I5ZYN9	A0A8I5ZYN9_RAT	Ipo11-ps1	Similar to importin 11	1	VAPHALSEEEK	VAPHALSEEEK	3	VAPHALSEEEK3	21507.9	35425.9	38265.6
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	VAPKPPQMGR	VAPKPPQMGR	2	VAPKPPQMGR2	73894.8	58349.9	41770.3
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	VAPNSEER	VAPNSEER	2	VAPNSEER2			53818.9
P07340	P07340	AT1B1_RAT	Atp1b1	Sodium/potassium-transporting ATPase subunit beta-1	1	VAPPGLTQIPQIQK	VAPPGLTQIPQIQK	2	VAPPGLTQIPQIQK2	32387.7	35437	32236.9
Q4KM98	Q4KM98	MFF_RAT	Mff	Mitochondrial fission factor	1	VAPPNADLEQGFQDGVPNASVIMQVPER	VAPPNADLEQGFQDGVPNASVIMQVPER	4	VAPPNADLEQGFQDGVPNASVIMQVPER4	9109.11	10300.3	7083.42
Q5XIC1	Q5XIC1	GMPPA_RAT	Gmppa	Mannose-1-phosphate guanyltransferase alpha	1	VAPSAVLGPNVSIGK	VAPSAVLGPNVSIGK	2	VAPSAVLGPNVSIGK2	21724	18192.7	18005.7
P08461	A0A8I6B5J2;P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	0	VAPTPAGVFIDIPISNIR	VAPTPAGVFIDIPISNIR	2	VAPTPAGVFIDIPISNIR2	22519.8	17286.5	17585.5
P08461	A0A8I6B5J2;P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	0	VAPTPAGVFIDIPISNIR	VAPTPAGVFIDIPISNIR	3	VAPTPAGVFIDIPISNIR3	24200	21448	25715.1
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	VAPVKPSRPK	VAPVKPSRPK	2	VAPVKPSRPK2			14532.6
Q8K1Q0	A0A8I5ZWZ4;Q8K1Q0	NMT1_RAT	Nmt1	Glycylpeptide N-tetradecanoyltransferase 1	0	VAPVLIR	VAPVLIR	2	VAPVLIR2	6190.14	5592.35	5414.38
B1WBN7	B1WBN7	B1WBN7_RAT	Fam20c	FAM20C	1	VAPVLYQLHLEALDR	VAPVLYQLHLEALDR	3	VAPVLYQLHLEALDR3	23581.3	21475.8	20475.6
B1WBN7	B1WBN7	B1WBN7_RAT	Fam20c	FAM20C	1	VAPVLYQLHLEALDRR	VAPVLYQLHLEALDRR	3	VAPVLYQLHLEALDRR3	13521.8	22708.7	7897.25
B1WBN7	B1WBN7	B1WBN7_RAT	Fam20c	FAM20C	1	VAPVLYQLHLEALDRR	VAPVLYQLHLEALDRR	4	VAPVLYQLHLEALDRR4	44771.6	38742.6	38139.5
A0A8I6A3H1	A0A8I6A3H1	A0A8I6A3H1_RAT	Ero1b	Endoplasmic reticulum oxidoreductase 1 beta	1	VAPYFER	VAPYFER	2	VAPYFER2	20342.1	18820.7	
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	VAQASSSQYFR	VAQASSSQYFR	2	VAQASSSQYFR2	19691.6	19537.4	23892.6
D3ZAR1	D3ZAR1	ARH_RAT	Ldlrap1	Low density lipoprotein receptor adapter protein 1	1	VAQAVTLTVAQAFK	VAQAVTLTVAQAFK	2	VAQAVTLTVAQAFK2	17904	17710.5	21225.6
D3ZAR1	D3ZAR1	ARH_RAT	Ldlrap1	Low density lipoprotein receptor adapter protein 1	1	VAQAVTLTVAQAFK	VAQAVTLTVAQAFK	3	VAQAVTLTVAQAFK3	5743.68	6642.59	8235.51
Q9ET64	Q9ET64	NSMA_RAT	Smpd2	Sphingomyelin phosphodiesterase 2	1	VAQAWELAQFIHHTSK	VAQAWELAQFIHHTSK	3	VAQAWELAQFIHHTSK3	8904.48	14694.1	10130.4
Q9ET64	Q9ET64	NSMA_RAT	Smpd2	Sphingomyelin phosphodiesterase 2	1	VAQAWELAQFIHHTSK	VAQAWELAQFIHHTSK	4	VAQAWELAQFIHHTSK4	23447.2	16260.1	23047.4
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	VAQDQLR	VAQDQLR	2	VAQDQLR2	171994	167468	178492
Q6XUX2	Q6XUX2	DUSTY_RAT	Dstyk	Dual serine/threonine and tyrosine protein kinase	1	VAQEAIDSLSASK	VAQEAIDSLSASK	2	VAQEAIDSLSASK2	2644.19	7840.09	5063.7
P12346	P12346;A0A8I6AEF9	TRFE_RAT	Tf	Serotransferrin	0	VAQEHFGK	VAQEHFGK	1	VAQEHFGK1	30230.8	43763.4	28417.2
P12346	P12346;A0A8I6AEF9	TRFE_RAT	Tf	Serotransferrin	0	VAQEHFGK	VAQEHFGK	2	VAQEHFGK2	1.19299e+06	1.25068e+06	1.18229e+06
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	VAQEHFGKDK	VAQEHFGKDK	3	VAQEHFGKDK3			6974.59
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	VAQFDYGK	VAQFDYGK	2	VAQFDYGK2	33712.6	39377.8	40947.8
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	VAQFLVIYAPR	VAQFLVIYAPR	2	VAQFLVIYAPR2	68552.9	64200.5	66689.3
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	VAQFLVIYAPR	VAQFLVIYAPR	3	VAQFLVIYAPR3	5661.73		3881.48
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	VAQGIREEEVSYQLAFNK	VAQGIREEEVSYQLAFNK	3	VAQGIREEEVSYQLAFNK3	9182.27	10151.2	9655.03
D3ZLT1	D3ZLT1	D3ZLT1_RAT	Ndufb7	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7	1	VAQGQGEGEVGPEMAL	VAQGQGEGEVGPEMAL	2	VAQGQGEGEVGPEMAL2	8077.11	9205.26	14755.1
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	VAQGVSGAVQDK	VAQGVSGAVQDK	2	VAQGVSGAVQDK2	74644.3	65666.8	72775.4
A0A0G2K7U7	A0A0G2K7U7	A0A0G2K7U7_RAT	Ankrd27	Ankyrin repeat domain 27	1	VAQIHGIVLVPCR	VAQIHGIVLVPC(UniMod:4)R	3	VAQIHGIVLVPC(UniMod:4)R3	6804.18	8650.05	5580
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	VAQIPFCGEIDCEDWIKK	VAQIPFC(UniMod:4)GEIDC(UniMod:4)EDWIKK	3	VAQIPFC(UniMod:4)GEIDC(UniMod:4)EDWIKK3	81483.8	88403.8	84052.6
P97526	P97526	NF1_RAT	Nf1	Neurofibromin	1	VAQLAVINSLEK	VAQLAVINSLEK	2	VAQLAVINSLEK2	3742.38		3191
P08082	P08082	CLCB_RAT	Cltb	Clathrin light chain B	1	VAQLCDFNPK	VAQLC(UniMod:4)DFNPK	2	VAQLC(UniMod:4)DFNPK2	101260	87882.3	95395.3
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	VAQLEAQCQEPCK	VAQLEAQC(UniMod:4)QEPC(UniMod:4)K	2	VAQLEAQC(UniMod:4)QEPC(UniMod:4)K2	2.0115e+07	1.65092e+07	1.68845e+07
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	VAQLEAQCQEPCK	VAQLEAQC(UniMod:4)QEPC(UniMod:4)K	3	VAQLEAQC(UniMod:4)QEPC(UniMod:4)K3	978279	984052	1.08255e+06
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	VAQLEAQCQEPCKDSVR	VAQLEAQC(UniMod:4)QEPC(UniMod:4)KDSVR	3	VAQLEAQC(UniMod:4)QEPC(UniMod:4)KDSVR3	216165	233522	244719
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	VAQLEAQCQEPCKDSVR	VAQLEAQC(UniMod:4)QEPC(UniMod:4)KDSVR	4	VAQLEAQC(UniMod:4)QEPC(UniMod:4)KDSVR4	68485.9	68834.3	78745.9
M0R907	M0R907	M0R907_RAT	Snrpd3	Small nuclear ribonucleoprotein Sm D3	1	VAQLEQVYIR	VAQLEQVYIR	2	VAQLEQVYIR2	1955.92	1782.17	2185.72
Q704E8	Q704E8	ABCB7_RAT	Abcb7	Iron-sulfur clusters transporter ABCB7, mitochondrial	1	VAQNSIR	VAQNSIR	2	VAQNSIR2	11735.8		16082.8
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VAQPSITDNK	VAQPSITDNK	2	VAQPSITDNK2	8.38649e+06	8.00497e+06	8.51436e+06
P14056	P14056	ARAF_RAT	Araf	Serine/threonine-protein kinase A-Raf	1	VAQPTAEQAQAFK	VAQPTAEQAQAFK	2	VAQPTAEQAQAFK2	58056.2	64368.6	52181.1
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	VAQQEIK	VAQQEIK	2	VAQQEIK2	49939.1	29271.8	28773
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	VAQSDGEESPAEEGQLLGER	VAQSDGEESPAEEGQLLGER	3	VAQSDGEESPAEEGQLLGER3	5393.69	3846.61	6421.1
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	VAQSIEDHHQEVIGFCR	VAQSIEDHHQEVIGFC(UniMod:4)R	3	VAQSIEDHHQEVIGFC(UniMod:4)R3	10158.6	5541.33	3862.47
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	VAQSIEDHHQEVIGFCR	VAQSIEDHHQEVIGFC(UniMod:4)R	4	VAQSIEDHHQEVIGFC(UniMod:4)R4	18304.5	16542.6	14351.7
A0A8I6GLU8	A0A8I6GLU8	A0A8I6GLU8_RAT	Tardbp	TAR DNA-binding protein 43	1	VAQSLCGEDLIIK	VAQSLC(UniMod:4)GEDLIIK	2	VAQSLC(UniMod:4)GEDLIIK2	25704.4	29740.9	22314.3
A0A8I5ZSB0	A0A8I5ZSB0	A0A8I5ZSB0_RAT	Igtp	Interferon gamma induced GTPase	1	VAQSTGRPEMSTR	VAQSTGRPEMSTR	3	VAQSTGRPEMSTR3		10772.2	
B5DEH2	B5DEH2	ERLN2_RAT	Erlin2	Erlin-2	1	VAQVAEITYGQK	VAQVAEITYGQK	2	VAQVAEITYGQK2	79536.9	71193.4	102216
Q9JMK8	Q9JMK8	VPS54_RAT	Vps54	Vacuolar protein sorting-associated protein 54	1	VAQVEEIDTDAVVK	VAQVEEIDTDAVVK	2	VAQVEEIDTDAVVK2		2214.56	2912.64
D3ZQ65	D3ZQ65	D3ZQ65_RAT	Emilin3	Elastin microfibril interfacer 3	1	VAQVEGAYER	VAQVEGAYER	2	VAQVEGAYER2	4223.82	9176.19	4262.03
P35053	P35053	GPC1_RAT	Gpc1	Glypican-1	1	VAQVPLAPECSR	VAQVPLAPEC(UniMod:4)SR	2	VAQVPLAPEC(UniMod:4)SR2	65806.4	55195.8	51577.7
Q64640	Q64640	ADK_RAT	Adk	Adenosine kinase	1	VAQWMIQEPHR	VAQWMIQEPHR	3	VAQWMIQEPHR3	16530.3	13198.6	17125
Q5FVI6	Q5FVI6	VATC1_RAT	Atp6v1c1	V-type proton ATPase subunit C 1	1	VAQYMADVLEDSKDK	VAQYMADVLEDSKDK	3	VAQYMADVLEDSKDK3	12313.8	10556	10544.7
B2RYF7	B2RYF7	WASH1_RAT	Washc1	WASH complex subunit 1	1	VAREEDSGSGEAHSASVQGAPK	VAREEDSGSGEAHSASVQGAPK	3	VAREEDSGSGEAHSASVQGAPK3	2894.08		3232.95
A0A0G2K069	A0A0G2K069	A0A0G2K069_RAT	Col11a2	Collagen type XI alpha 2 chain	1	VARPAQLSAPTR	VARPAQLSAPTR	3	VARPAQLSAPTR3	7443.6	4274.32	7577.67
B2GV97	B2GV97	B2GV97_RAT	Sepsecs	O-phosphoseryl-tRNA(Sec) selenium transferase	1	VASALVAR	VASALVAR	2	VASALVAR2	14064	17419.4	9194.98
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	VASEALMK	VASEALMK	2	VASEALMK2	137176	127521	130529
Q68FY0	Q68FY0	QCR1_RAT	Uqcrc1	Cytochrome b-c1 complex subunit 1, mitochondrial	1	VASEQSSHPTCTVGVWIDVGSR	VASEQSSHPTC(UniMod:4)TVGVWIDVGSR	3	VASEQSSHPTC(UniMod:4)TVGVWIDVGSR3	83200.5	75026.9	79193.6
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	VASEVPPEHQPAVGAWPPR	VASEVPPEHQPAVGAWPPR	3	VASEVPPEHQPAVGAWPPR3	14985.7	22719.1	24766.4
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	VASFSCLCPEGK	VASFSC(UniMod:4)LC(UniMod:4)PEGK	2	VASFSC(UniMod:4)LC(UniMod:4)PEGK2	100737	92727	86690.7
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	VASFYCACPMGK	VASFYC(UniMod:4)AC(UniMod:4)PMGK	2	VASFYC(UniMod:4)AC(UniMod:4)PMGK2	48233.4	60628.3	63573.8
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	VASFYCECPHGR	VASFYC(UniMod:4)EC(UniMod:4)PHGR	2	VASFYC(UniMod:4)EC(UniMod:4)PHGR2	6031.77	4894.23	8635.69
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	VASFYCECPHGR	VASFYC(UniMod:4)EC(UniMod:4)PHGR	3	VASFYC(UniMod:4)EC(UniMod:4)PHGR3	50816.7	62106.3	50955.1
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	VASGAAAEWK	VASGAAAEWK	2	VASGAAAEWK2	72449.9	65243.3	86777.9
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	VASGLYLGTCER	VASGLYLGTC(UniMod:4)ER	2	VASGLYLGTC(UniMod:4)ER2	76318.9	99909.8	67804.5
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	VASGPIPSWANPSPTPATAMLAVGAK	VASGPIPSWANPSPTPATAMLAVGAK	3	VASGPIPSWANPSPTPATAMLAVGAK3	35812.2	35788.1	44585.1
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	VASGQTAGVDKDGKPLQPVVHIWDSETLQK	VASGQTAGVDKDGKPLQPVVHIWDSETLQK	4	VASGQTAGVDKDGKPLQPVVHIWDSETLQK4	2552.21	3340.49	
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	VASGSDLHLTDIDSDSNR	VASGSDLHLTDIDSDSNR	3	VASGSDLHLTDIDSDSNR3	18285.3	26414.6	15095
Q9JLT6	Q9JLT6	BID_RAT	Bid	BH3-interacting domain death agonist	1	VASHAPSLLR	VASHAPSLLR	2	VASHAPSLLR2	4881.95		3194.09
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	VASILHDDCAFLSAFGDLSKPER	VASILHDDC(UniMod:4)AFLSAFGDLSKPER	3	VASILHDDC(UniMod:4)AFLSAFGDLSKPER3		7845.54	7173.26
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	VASILHDDCAFLSAFGDLSKPER	VASILHDDC(UniMod:4)AFLSAFGDLSKPER	4	VASILHDDC(UniMod:4)AFLSAFGDLSKPER4	70758.2	62762.5	60169.7
F1M471	F1M471	F1M471_RAT	Epm2aip1	EPM2A interacting protein 1	1	VASLFDSNQICDK	VASLFDSNQIC(UniMod:4)DK	2	VASLFDSNQIC(UniMod:4)DK2	5036.48	4135.48	3982.2
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VASNFPVDLSR	VASNFPVDLSR	2	VASNFPVDLSR2	4.32617e+06	4.98987e+06	4.83136e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VASNFPVDLSRYPR	VASNFPVDLSRYPR	3	VASNFPVDLSRYPR3		7191.31	
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	VASNPYTWFTMEALEETWR	VASNPYTWFTMEALEETWR	3	VASNPYTWFTMEALEETWR3	44979.7	39383.5	24950.4
D3ZJR6	D3ZJR6	D3ZJR6_RAT	Smcr8	SMCR8-C9orf72 complex subunit	1	VASPANVGTLHTLSR	VASPANVGTLHTLSR	3	VASPANVGTLHTLSR3			4980.41
Q6AXV6	Q6AXV6	CBY2_RAT	Cby2	Protein chibby homolog 2	1	VASQHSYPLNR	VASQHSYPLNR	3	VASQHSYPLNR3	24737.3		
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	VASSAFLNAPR	VASSAFLNAPR	2	VASSAFLNAPR2	6057.34	9944.44	5514.4
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	VASSDLVNMGISVVSYTLK	VASSDLVNMGISVVSYTLK	3	VASSDLVNMGISVVSYTLK3	8459.39	5594.69	6486.89
D4A3E8	D4A3E8	D4A3E8_RAT	Mrps27	Mitochondrial ribosomal protein S27	1	VASSPEDVK	VASSPEDVK	2	VASSPEDVK2	16515.6	22445.4	22275.3
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	VASSTLLDDR	VASSTLLDDR	2	VASSTLLDDR2	64509.6	40398	63098.4
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	VASSTLLDDRR	VASSTLLDDRR	2	VASSTLLDDRR2	8403.6	8573.06	3073.66
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	VASSTLLDDRR	VASSTLLDDRR	3	VASSTLLDDRR3	1.48447e+06	1.70639e+06	1.45211e+06
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	VASSVAGLLLFVSR	VASSVAGLLLFVSR	2	VASSVAGLLLFVSR2	77142.9	88875.7	81318
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	VASSVAGLLLFVSR	VASSVAGLLLFVSR	3	VASSVAGLLLFVSR3	33835.2	29063.8	42160.8
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	VASSVEQLNTIEDEVSQPLATPPSK	VASSVEQLNTIEDEVSQPLATPPSK	3	VASSVEQLNTIEDEVSQPLATPPSK3	5707.04	6554.05	5435.56
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	VASTENGIIFGNIVYDVSGAASDR	VASTENGIIFGNIVYDVSGAASDR	3	VASTENGIIFGNIVYDVSGAASDR3	44656.2	52635.5	64344.9
P17220	P17220	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	1	VASVMQEYTQSGGVR	VASVMQEYTQSGGVR	2	VASVMQEYTQSGGVR2	6378.96	9657.06	7672.62
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	VASYFDWISYYVGR	VASYFDWISYYVGR	2	VASYFDWISYYVGR2	15057	16961.7	16111.4
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	VASYFDWISYYVGR	VASYFDWISYYVGR	3	VASYFDWISYYVGR3	5459.12	9624.83	6668.74
F7ELS2	F7ELS2	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	1	VATAQDDITGDGTTSNVLIIGELLK	VATAQDDITGDGTTSNVLIIGELLK	3	VATAQDDITGDGTTSNVLIIGELLK3	34915.3	31712.6	44975.7
P55213	P55213	CASP3_RAT	Casp3	Caspase-3	1	VATEFESFSLDATFHAK	VATEFESFSLDATFHAK	3	VATEFESFSLDATFHAK3	3483.32	6723	2822.14
Q53B90	Q53B90	RAB43_RAT	Rab43	Ras-related protein Rab-43	1	VATELIMR	VATELIMR	2	VATELIMR2	20314	22319.9	12714.3
D3ZIJ5	D3ZIJ5	D3ZIJ5_RAT	Dpm3	Dolichol-phosphate mannosyltransferase subunit 3	1	VATFHDCEDAAR	VATFHDC(UniMod:4)EDAAR	3	VATFHDC(UniMod:4)EDAAR3	27812.1	32922.3	34755.6
Q99P63	Q99P63	MICU2_RAT	Micu2	Calcium uptake protein 2, mitochondrial	1	VATGQELSDNLLDTVFK	VATGQELSDNLLDTVFK	3	VATGQELSDNLLDTVFK3	14425	20189.6	21878.9
Q62848	Q62848	ARFG1_RAT	Arfgap1	ADP-ribosylation factor GTPase-activating protein 1	1	VATLAEGK	VATLAEGK	2	VATLAEGK2	107050	107923	116877
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	VATLPPSTQETGGQLLCR	VATLPPSTQETGGQLLC(UniMod:4)R	2	VATLPPSTQETGGQLLC(UniMod:4)R2	151914	63247.1	91609.4
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	VATLPPSTQETGGQLLCR	VATLPPSTQETGGQLLC(UniMod:4)R	3	VATLPPSTQETGGQLLC(UniMod:4)R3	79150.8	67368.6	84246.9
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	VATMAWAAFQVLANR	VATMAWAAFQVLANR	3	VATMAWAAFQVLANR3	3376.77	5246.37	3885.49
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	VATMMSK	VATMMSK	2	VATMMSK2	122672	150573	130068
A0A8I5Y6H9	A0A8I5Y6H9	A0A8I5Y6H9_RAT	Tln2	Talin 2	1	VATNAAAQNAIK	VATNAAAQNAIK	3	VATNAAAQNAIK3	2655		
A0A8I6A502	A0A8I6A502	A0A8I6A502_RAT	Tns3	Tensin 3	1	VATPPPSVLHLNK	VATPPPSVLHLNK	3	VATPPPSVLHLNK3	9245.15	19724.9	12496.9
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	VATVGLVSSTRPDGER	VATVGLVSSTRPDGER	3	VATVGLVSSTRPDGER3	182029	157851	155757
Q68HB8	Q68HB8	Q68HB8_RAT	Pcdh7	Protocadherin 7	1	VATVLATDADSGK	VATVLATDADSGK	2	VATVLATDADSGK2	9094.03	7110.8	9562.38
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VATVPQHATSGPGPADVSK	VATVPQHATSGPGPADVSK	2	VATVPQHATSGPGPADVSK2	323308	287692	217329
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VATVPQHATSGPGPADVSK	VATVPQHATSGPGPADVSK	3	VATVPQHATSGPGPADVSK3	1.33222e+07	1.22783e+07	1.25498e+07
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VATVPQHATSGPGPADVSK	VATVPQHATSGPGPADVSK	4	VATVPQHATSGPGPADVSK4	4406.71	1523.19	3636.05
A0A096MJF9	A0A096MJF9	A0A096MJF9_RAT	Tmem132e	Transmembrane protein 132E	1	VATVTQDK	VATVTQDK	2	VATVTQDK2	7461.51		13054.4
P08649	P08649	CO4_RAT	C4	Complement C4	1	VATWLTHQGSFQGGFR	VATWLTHQGSFQGGFR	2	VATWLTHQGSFQGGFR2	469277	444909	344176
P08649	P08649	CO4_RAT	C4	Complement C4	1	VATWLTHQGSFQGGFR	VATWLTHQGSFQGGFR	3	VATWLTHQGSFQGGFR3	501563	1.15698e+06	979940
P08649	P08649	CO4_RAT	C4	Complement C4	1	VATWLTHQGSFQGGFR	VATWLTHQGSFQGGFR	4	VATWLTHQGSFQGGFR4	28302.5	38800.8	23497.7
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	VATYDHIGPNVCMGDHKPVFLAFR	VATYDHIGPNVC(UniMod:4)MGDHKPVFLAFR	3	VATYDHIGPNVC(UniMod:4)MGDHKPVFLAFR3	8813.02	6363.77	6174.38
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	VATYDHIGPNVCMGDHKPVFLAFR	VATYDHIGPNVC(UniMod:4)MGDHKPVFLAFR	4	VATYDHIGPNVC(UniMod:4)MGDHKPVFLAFR4	28237.8	40013.1	28864
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	VATYLPAPEGLK	VATYLPAPEGLK	2	VATYLPAPEGLK2	1.99178e+06	2.40902e+06	2.29261e+06
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	VATYLPAPEGLK	VATYLPAPEGLK	3	VATYLPAPEGLK3	4228.15	7181	13045.1
D4A1D4	D4A1D4	D4A1D4_RAT	Nudt14	Nudix hydrolase 14	1	VATYMSGVGLTGSR	VATYMSGVGLTGSR	2	VATYMSGVGLTGSR2	1169.23	1221.61	1602.04
Q9Z0J5	Q9Z0J5	TRXR2_RAT	Txnrd2	Thioredoxin reductase 2, mitochondrial	1	VAVADYVEPSPR	VAVADYVEPSPR	2	VAVADYVEPSPR2	22792.6	13886.2	12716.7
B2RYJ2	B2RYJ2	B2RYJ2_RAT	Dbr1	Debranching RNA lariats 1	1	VAVAGCCHGELDK	VAVAGC(UniMod:4)C(UniMod:4)HGELDK	3	VAVAGC(UniMod:4)C(UniMod:4)HGELDK3	10275	13393.5	
P20817	P24464;P20817;D3ZTC9;P20816	CP4AE_RAT	Cyp4a14	Cytochrome P450 4A14	0	VAVALTLLR	VAVALTLLR	2	VAVALTLLR2	936.908	4827.14	1783.75
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	VAVATILEK	VAVATILEK	2	VAVATILEK2	15905	22955.9	25941.1
Q4QRB4	Q4QRB4;M0R8B6;Q4QQV0	TBB3_RAT	Tubb3	Tubulin beta-3 chain	0	VAVCDIPPR	VAVC(UniMod:4)DIPPR	2	VAVC(UniMod:4)DIPPR2	727109	619982	783892
Q3B7D1	Q3B7D1	UBE2Z_RAT	Ube2z	Ubiquitin-conjugating enzyme E2 Z	1	VAVCDMMEGK	VAVC(UniMod:4)DMMEGK	2	VAVC(UniMod:4)DMMEGK2	63890.8	88756.9	63847.8
P47967	P47967	LEG5_RAT	Lgals5	Galectin-5	1	VAVDGQHICEYSHR	VAVDGQHIC(UniMod:4)EYSHR	4	VAVDGQHIC(UniMod:4)EYSHR4	11006.6	8794.71	11874
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	VAVEEVDEEGK	VAVEEVDEEGK	2	VAVEEVDEEGK2	37050.3	20047.3	33669.1
P48679	P48679	LMNA_RAT	Lmna	Prelamin-A/C	1	VAVEEVDEEGKFVR	VAVEEVDEEGKFVR	3	VAVEEVDEEGKFVR3	4982.57	6249.18	4905.07
D4ADG2	D4ADG2	D4ADG2_RAT	Iba57	Iron-sulfur cluster assembly factor IBA57	1	VAVEPHPELHVWAVLPCAPQTSEAAPLEER	VAVEPHPELHVWAVLPC(UniMod:4)APQTSEAAPLEER	4	VAVEPHPELHVWAVLPC(UniMod:4)APQTSEAAPLEER4	8048.89	2496.33	5594.71
Q63413	Q63413	DX39B_RAT	Ddx39b	Spliceosome RNA helicase Ddx39b	1	VAVFFGGLSIK	VAVFFGGLSIK	2	VAVFFGGLSIK2	7837.85	4767	4179.04
D4A6U4	D4A6U4	D4A6U4_RAT	Tecpr2	Tectonin beta-propeller repeat containing 2	1	VAVFQLVSSLPGR	VAVFQLVSSLPGR	2	VAVFQLVSSLPGR2	4242.4		4911.8
P47861	P47861	SYT5_RAT	Syt5	Synaptotagmin-5	1	VAVGTAVGGAGLR	VAVGTAVGGAGLR	2	VAVGTAVGGAGLR2	14517.7	28079.2	26938.5
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	VAVIQFSEDTK	VAVIQFSEDTK	2	VAVIQFSEDTK2	14526.6	12489.8	11368.9
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	VAVLEFELR	VAVLEFELR	2	VAVLEFELR2	30816.6	34754.2	35477
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	VAVLEFELRK	VAVLEFELRK	3	VAVLEFELRK3	5119.54	8284.51	4728.74
A0A8I6GM04	A0A0G2K988;A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	0	VAVLEILGAVCLVPGGHK	VAVLEILGAVC(UniMod:4)LVPGGHK	3	VAVLEILGAVC(UniMod:4)LVPGGHK3	43070.3	30229.5	28017.6
A0A8I6GM04	A0A0G2K988;A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	0	VAVLEILGAVCLVPGGHKK	VAVLEILGAVC(UniMod:4)LVPGGHKK	3	VAVLEILGAVC(UniMod:4)LVPGGHKK3		5913.86	7058.13
A0A8I6GM04	A0A0G2K988;A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	0	VAVLEILGAVCLVPGGHKK	VAVLEILGAVC(UniMod:4)LVPGGHKK	4	VAVLEILGAVC(UniMod:4)LVPGGHKK4	30257.1	32592.2	33106.6
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	VAVLGASGGIGQPLSLLLK	VAVLGASGGIGQPLSLLLK	2	VAVLGASGGIGQPLSLLLK2	405285	414553	424654
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	VAVLGASGGIGQPLSLLLK	VAVLGASGGIGQPLSLLLK	3	VAVLGASGGIGQPLSLLLK3	63809.5	71025.7	84534.9
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	VAVLGNVDSGK	VAVLGNVDSGK	2	VAVLGNVDSGK2	170337	167268	162341
B5DEH4	D3ZF39;B5DEH4	B5DEH4_RAT	Uap1l1	UDP-N-acetylglucosamine pyrophosphorylase 1 like 1	0	VAVLLLAGGQGTR	VAVLLLAGGQGTR	2	VAVLLLAGGQGTR2	5668.96	8870.92	6128.31
A0A8I6ANU2	A0A8I6ANU2	A0A8I6ANU2_RAT	Ptcd3	Pentatricopeptide repeat domain 3	1	VAVLQALASTVTR	VAVLQALASTVTR	2	VAVLQALASTVTR2	5820.66	4268.44	5527.04
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	VAVLVMGR	VAVLVMGR	2	VAVLVMGR2	43530.9	43627.5	26024.4
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	VAVMFNFPDSATVK	VAVMFNFPDSATVK	2	VAVMFNFPDSATVK2	26816.8	14305	25956.2
P83006	P83006	PAFA2_RAT	Pafah2	Platelet-activating factor acetylhydrolase 2, cytoplasmic	1	VAVMGHSFGGATAILALTQEAQFR	VAVMGHSFGGATAILALTQEAQFR	3	VAVMGHSFGGATAILALTQEAQFR3	6270.45	4859.76	10216.9
P08699	P08699	LEG3_RAT	Lgals3	Galectin-3	1	VAVNDVHLLQYNHR	VAVNDVHLLQYNHR	4	VAVNDVHLLQYNHR4	3561	1889.42	2854.1
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	VAVNEGCQPSR	VAVNEGC(UniMod:4)QPSR	2	VAVNEGC(UniMod:4)QPSR2	12426.3	21351.1	10153.8
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	VAVNILNNGR	VAVNILNNGR	2	VAVNILNNGR2	38638.5	28912.1	40215.5
D3ZE05	D3ZE05	D3ZE05_RAT	Cilp2	Cartilage intermediate layer protein 2	1	VAVNTLLQDYLAR	VAVNTLLQDYLAR	2	VAVNTLLQDYLAR2	18011.9	16956.8	12805.2
D3ZE05	D3ZE05	D3ZE05_RAT	Cilp2	Cartilage intermediate layer protein 2	1	VAVNTLLQDYLAR	VAVNTLLQDYLAR	3	VAVNTLLQDYLAR3	7301.77	8373.36	7628.34
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	VAVPLLSSGGQVAVLELQK	VAVPLLSSGGQVAVLELQK	2	VAVPLLSSGGQVAVLELQK2	14645.2	14391.2	
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	VAVPLLSSGGQVAVLELQK	VAVPLLSSGGQVAVLELQK	3	VAVPLLSSGGQVAVLELQK3	2668.98	6412.41	3986.23
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	VAVPLLSSGGQVAVLELQKPGR	VAVPLLSSGGQVAVLELQKPGR	3	VAVPLLSSGGQVAVLELQKPGR3	168229	154732	149865
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	VAVPSTIHCDHLIEAQLGGEK	VAVPSTIHC(UniMod:4)DHLIEAQLGGEK	3	VAVPSTIHC(UniMod:4)DHLIEAQLGGEK3	46422.5	42806.3	42530
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	VAVPSTIHCDHLIEAQLGGEK	VAVPSTIHC(UniMod:4)DHLIEAQLGGEK	4	VAVPSTIHC(UniMod:4)DHLIEAQLGGEK4	92181.5	81787.3	96121.7
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	VAVQGDAVR	VAVQGDAVR	2	VAVQGDAVR2	118148	106875	109141
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	VAVQLEASPDFLAAPEEK	VAVQLEASPDFLAAPEEK	2	VAVQLEASPDFLAAPEEK2	9751.47	7420.39	3517.45
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	VAVQLSHPADMQLVLR	VAVQLSHPADMQLVLR	3	VAVQLSHPADMQLVLR3	37580.9	41105.7	30286.6
Q5XI73	Q5XI73	GDIR1_RAT	Arhgdia	Rho GDP-dissociation inhibitor 1	1	VAVSADPNVPNVIVTR	VAVSADPNVPNVIVTR	2	VAVSADPNVPNVIVTR2	341528	321572	345402
Q5XI73	Q5XI73	GDIR1_RAT	Arhgdia	Rho GDP-dissociation inhibitor 1	1	VAVSADPNVPNVIVTR	VAVSADPNVPNVIVTR	3	VAVSADPNVPNVIVTR3	64135.3	48874.6	53533.5
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	VAVSAVYMDLEAFLQR	VAVSAVYMDLEAFLQR	3	VAVSAVYMDLEAFLQR3	8171.29	13282	8789.84
Q62751	Q62751	IREB2_RAT	Ireb2	Iron-responsive element-binding protein 2	1	VAVTDMK	VAVTDMK	2	VAVTDMK2	27952.5	29128.4	31705.6
Q5M876	Q5M876	ACY3_RAT	Acy3	N-acyl-aromatic-L-amino acid amidohydrolase (carboxylate-forming)	1	VAVTGGTHGNEMCGVYLAR	VAVTGGTHGNEMC(UniMod:4)GVYLAR	3	VAVTGGTHGNEMC(UniMod:4)GVYLAR3	7213.76	2089.42	12990.4
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	VAVTPPGLAR	VAVTPPGLAR	2	VAVTPPGLAR2	98152.3	85709.4	104285
P46101	P46101	DPP6_RAT	Dpp6	Dipeptidyl aminopeptidase-like protein 6	1	VAVTWLNR	VAVTWLNR	2	VAVTWLNR2	8023.43	7790.63	7587.32
P10760	P10760	SAHH_RAT	Ahcy	Adenosylhomocysteinase	1	VAVVAGYGDVGK	VAVVAGYGDVGK	2	VAVVAGYGDVGK2	31413.4	32371.7	30752.9
F1M8L9	F1M8L9	F1M8L9_RAT	Rapgef1	Rap guanine nucleotide exchange factor 1	1	VAVVAPMSR	VAVVAPMSR	2	VAVVAPMSR2	4345.21	6079.41	6066.21
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	VAVVEQDLIIHQK	VAVVEQDLIIHQK	3	VAVVEQDLIIHQK3	11574.2	14071.3	8064.58
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	VAVVEYHDGSHAYLELR	VAVVEYHDGSHAYLELR	2	VAVVEYHDGSHAYLELR2	9899.84	4277.44	12418.2
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	VAVVEYHDGSHAYLELR	VAVVEYHDGSHAYLELR	3	VAVVEYHDGSHAYLELR3	266834	207073	215284
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	VAVVEYHDGSHAYLELR	VAVVEYHDGSHAYLELR	4	VAVVEYHDGSHAYLELR4	620882	747349	720961
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	VAVVGNVDAGK	VAVVGNVDAGK	2	VAVVGNVDAGK2	48617.9	58707.8	41196.7
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	VAVVLIQK	VAVVLIQK	2	VAVVLIQK2	73960.9	67939	72393.3
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	VAVVNQIAR	VAVVNQIAR	2	VAVVNQIAR2	1.43144e+06	1.47338e+06	1.40677e+06
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	VAVVQYSGQGQQQPGR	VAVVQYSGQGQQQPGR	2	VAVVQYSGQGQQQPGR2	22352.2	17806.8	19866.3
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	VAVVQYSGQGQQQPGR	VAVVQYSGQGQQQPGR	3	VAVVQYSGQGQQQPGR3	22187.6	17040.8	19137.9
Q5XI22	A0A0G2JUB4;Q5XI22	THIC_RAT	Acat2	Acetyl-CoA acetyltransferase, cytosolic	0	VAVVSQNR	VAVVSQNR	2	VAVVSQNR2	30342.3	26035.7	34538.9
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	VAVWDAGHYTCEAINQAGR	VAVWDAGHYTC(UniMod:4)EAINQAGR	3	VAVWDAGHYTC(UniMod:4)EAINQAGR3	47631.1	39080.3	44302.3
P31325	P31325	PHKG2_RAT	Phkg2	Phosphorylase b kinase gamma catalytic chain, liver/testis isoform	1	VAVWTILAAGR	VAVWTILAAGR	2	VAVWTILAAGR2	10582.8	10327.4	9785.86
G3V6W5	G3V6W5	G3V6W5_RAT	Ifih1	RNA helicase	1	VAVYITK	VAVYITK	2	VAVYITK2	25761.3	17583.8	24145.4
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	VAVYSTCL	VAVYSTC(UniMod:4)L	1	VAVYSTC(UniMod:4)L1	5842.33	7127.24	2709.16
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	VAVYSTCL	VAVYSTC(UniMod:4)L	2	VAVYSTC(UniMod:4)L2	4387.49	1997.45	
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	VAWHIDPFGHSR	VAWHIDPFGHSR	3	VAWHIDPFGHSR3	14116.9	13479	8128.91
A0A8I6ASC6	A0A8I6ASC6	A0A8I6ASC6_RAT	Igdcc4	Immunoglobulin superfamily, DCC subclass, member 4	1	VAWLPLPSSLSNGQVVK	VAWLPLPSSLSNGQVVK	2	VAWLPLPSSLSNGQVVK2	10120.3	5317.59	7469.93
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VAWRYDNEK	VAWRYDNEK	3	VAWRYDNEK3		8734.5	
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	VAWTAQPDSFAHFQLR	VAWTAQPDSFAHFQLR	2	VAWTAQPDSFAHFQLR2			3369.72
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	VAWTAQPDSFAHFQLR	VAWTAQPDSFAHFQLR	3	VAWTAQPDSFAHFQLR3	7579.61	2829.48	
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	VAWVSHDSTVCLVDAEK	VAWVSHDSTVC(UniMod:4)LVDAEK	3	VAWVSHDSTVC(UniMod:4)LVDAEK3	141787	132451	155811
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	VAWVSHDSTVCLVDAEKK	VAWVSHDSTVC(UniMod:4)LVDAEKK	3	VAWVSHDSTVC(UniMod:4)LVDAEKK3	32879	35905.2	32250.1
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	VAWVSHDSTVCLVDAEKK	VAWVSHDSTVC(UniMod:4)LVDAEKK	4	VAWVSHDSTVC(UniMod:4)LVDAEKK4	165925	178909	183309
Q6EV70	Q6EV70	OFUT1_RAT	Pofut1	GDP-fucose protein O-fucosyltransferase 1	1	VAYCFEVAAQR	VAYC(UniMod:4)FEVAAQR	2	VAYC(UniMod:4)FEVAAQR2		2906.05	4290.94
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VAYDLVYSVR	VAYDLVYSVR	2	VAYDLVYSVR2	945221	1.03283e+06	1.16009e+06
O88902	O88902	PTN23_RAT	Ptpn23	Tyrosine-protein phosphatase non-receptor type 23 (Fragment)	1	VAYFQSALDK	VAYFQSALDK	2	VAYFQSALDK2	6436.92	7397.7	8238.66
Q63507	Q6TUH8;A0A8I6AL87;A0A8I6G5N0;Q63507	RL14_RAT	Rpl14	Large ribosomal subunit protein eL14	0	VAYISFGPHAGK	VAYISFGPHAGK	3	VAYISFGPHAGK3	54850.3	62868.5	57585.2
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	VAYLDKEFSK	VAYLDKEFSK	3	VAYLDKEFSK3	35540.7	46718.8	41197.1
D3Z8X6	D3Z8X6	D3Z8X6_RAT	Dtx3l	E3 ubiquitin-protein ligase	1	VAYLPDNAEGR	VAYLPDNAEGR	2	VAYLPDNAEGR2	22578.4	14860.4	
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	VAYLQVPGIAK	VAYLQVPGIAK	2	VAYLQVPGIAK2	34576.6	39883.1	28729.1
D3ZE26	D3ZE26	D3ZE26_RAT	Tmcc2	Transmembrane and coiled-coil domain family 2	1	VAYQSYER	VAYQSYER	2	VAYQSYER2	47527.6	45051.7	59715.9
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	VAYSLDGR	VAYSLDGR	2	VAYSLDGR2	158240	166076	179251
P60868	D3ZZK1;A0A8I6AG52;A0A0G2K6L6;M0R5V6;P60868;M0R987;M0R566;M0RB28	RS20_RAT	Rps20	Small ribosomal subunit protein uS10	0	VCADLIR	VC(UniMod:4)ADLIR	2	VC(UniMod:4)ADLIR2	45525	51811.9	49000.2
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	VCALGGSK	VC(UniMod:4)ALGGSK	1	VC(UniMod:4)ALGGSK1	8817.34	10116.7	5844.96
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	VCALGGSK	VC(UniMod:4)ALGGSK	2	VC(UniMod:4)ALGGSK2	898845	747431	883816
P07943	P07943	ALDR_RAT	Akr1b1	Aldo-keto reductase family 1 member B1	1	VCALMSCAK	VC(UniMod:4)ALMSC(UniMod:4)AK	2	VC(UniMod:4)ALMSC(UniMod:4)AK2	16234.7	12531.6	20068.8
A0A8I5YC01	A0A8I5YC01	A0A8I5YC01_RAT	Gimap1	GTPase, IMAP family member 1	1	VCALNNR	VC(UniMod:4)ALNNR	2	VC(UniMod:4)ALNNR2	44352	41933	45637.2
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	VCALYIMAGTVDDVPK	VC(UniMod:4)ALYIMAGTVDDVPK	2	VC(UniMod:4)ALYIMAGTVDDVPK2	39367.2	36151.2	42125.5
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	VCALYIMAGTVDDVPK	VC(UniMod:4)ALYIMAGTVDDVPK	3	VC(UniMod:4)ALYIMAGTVDDVPK3	14256.1	16417.6	12983
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	VCASEKPPK	VC(UniMod:4)ASEKPPK	2	VC(UniMod:4)ASEKPPK2			22855.1
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	VCASGMK	VC(UniMod:4)ASGMK	1	VC(UniMod:4)ASGMK1	6761.08		6163.6
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	VCASLLLER	VC(UniMod:4)ASLLLER	2	VC(UniMod:4)ASLLLER2	15701.2	8793.17	14904.7
Q7TS56	Q7TS56	CBR4_RAT	Cbr4	3-oxoacyl-[acyl-carrier-protein] reductase	1	VCAVFGGSR	VC(UniMod:4)AVFGGSR	2	VC(UniMod:4)AVFGGSR2	10846.9	14192.5	10787.3
G3V9M3	G3V9M3	G3V9M3_RAT	Wdr47	WD repeat domain 47	1	VCAYPEK	VC(UniMod:4)AYPEK	2	VC(UniMod:4)AYPEK2	11022.3	17348.9	15286.7
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	VCCEGMLIQLR	VC(UniMod:4)C(UniMod:4)EGMLIQLR	2	VC(UniMod:4)C(UniMod:4)EGMLIQLR2	61534.3	65345.4	66149.3
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	VCDACFNDLQG	VC(UniMod:4)DAC(UniMod:4)FNDLQG	2	VC(UniMod:4)DAC(UniMod:4)FNDLQG2	4597.59	3467.68	4610.92
Q6P9X4	Q6P9X4	TP4A2_RAT	Ptp4a2	Protein tyrosine phosphatase type IVA 2	1	VCDATYDKAPVEK	VC(UniMod:4)DATYDKAPVEK	3	VC(UniMod:4)DATYDKAPVEK3	22545.7	24097.9	26710
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	VCDEAMGSFTSTSNFMSVR	VC(UniMod:4)DEAMGSFTSTSNFMSVR	3	VC(UniMod:4)DEAMGSFTSTSNFMSVR3	144777	169664	137178
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	VCDGDEENMQEQLDK	VC(UniMod:4)DGDEENMQEQLDK	2	VC(UniMod:4)DGDEENMQEQLDK2		1057.25	5449.45
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	VCDLIMTAIK	VC(UniMod:4)DLIMTAIK	2	VC(UniMod:4)DLIMTAIK2		3574.61	4804.49
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	VCDLLKEEHPTWDDEQLFQTTR	VC(UniMod:4)DLLKEEHPTWDDEQLFQTTR	3	VC(UniMod:4)DLLKEEHPTWDDEQLFQTTR3	10611.4	10603.2	8241.68
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	VCDLLKEEHPTWDDEQLFQTTR	VC(UniMod:4)DLLKEEHPTWDDEQLFQTTR	4	VC(UniMod:4)DLLKEEHPTWDDEQLFQTTR4	97090.3	86246.9	98179.4
D4A3T4	D4A3T4	D4A3T4_RAT	Zfyve1	Zinc finger FYVE-type containing 1	1	VCDNCYDAR	VC(UniMod:4)DNC(UniMod:4)YDAR	2	VC(UniMod:4)DNC(UniMod:4)YDAR2	6062.6		6157.65
A0A8I5ZXB9	A0A8I5ZXB9	A0A8I5ZXB9_RAT	Kifap3	Kinesin-associated protein 3	1	VCDNTLDIIAEYDEEWAK	VC(UniMod:4)DNTLDIIAEYDEEWAK	3	VC(UniMod:4)DNTLDIIAEYDEEWAK3	3903.82		2639
P98166	P98166	VLDLR_RAT	Vldlr	Very low-density lipoprotein receptor	1	VCDQEQDCRDWSDEPLK	VC(UniMod:4)DQEQDC(UniMod:4)RDWSDEPLK	3	VC(UniMod:4)DQEQDC(UniMod:4)RDWSDEPLK3	2498.37	7999.51	7848.28
F1LR42	F1LR42	F1LR42_RAT	Rufy1	RUN and FYVE domain containing 1	1	VCDSCHTLLLQR	VC(UniMod:4)DSC(UniMod:4)HTLLLQR	3	VC(UniMod:4)DSC(UniMod:4)HTLLLQR3	24659.8	19401.2	18739.9
A0A0G2K3L8	A0A0G2K3L8	A0A0G2K3L8_RAT	Wdfy1	WD repeat and FYVE domain containing 1	1	VCDSCYDSIKDEDR	VC(UniMod:4)DSC(UniMod:4)YDSIKDEDR	3	VC(UniMod:4)DSC(UniMod:4)YDSIKDEDR3	9430.3	19232	20707.7
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	VCDSQEHTVTVSLR	VC(UniMod:4)DSQEHTVTVSLR	2	VC(UniMod:4)DSQEHTVTVSLR2	2355.1		
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	VCDSQEHTVTVSLR	VC(UniMod:4)DSQEHTVTVSLR	3	VC(UniMod:4)DSQEHTVTVSLR3	58933.4	50783.7	71168.6
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	VCDSYPTELYVPR	VC(UniMod:4)DSYPTELYVPR	2	VC(UniMod:4)DSYPTELYVPR2	98382.2	118392	108967
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	VCDSYPTELYVPR	VC(UniMod:4)DSYPTELYVPR	3	VC(UniMod:4)DSYPTELYVPR3	9149.66	10502.1	11610.9
P81155	P81155	VDAC2_RAT	Vdac2	Voltage-dependent anion-selective channel protein 2	1	VCEDFDTSVNLAWTSGTNCTR	VC(UniMod:4)EDFDTSVNLAWTSGTNC(UniMod:4)TR	3	VC(UniMod:4)EDFDTSVNLAWTSGTNC(UniMod:4)TR3	9035.7	11641.7	9175.56
Q9R0Z7	Q9R0Z7	AAGAB_RAT	Aagab	Alpha- and gamma-adaptin-binding protein p34	1	VCEDGINR	VC(UniMod:4)EDGINR	2	VC(UniMod:4)EDGINR2	21444.3	19992.3	17589.5
P04644	P04644;D3ZKG6;D3ZHU9;D3ZFA8	RS17_RAT	Rps17	Small ribosomal subunit protein eS17	0	VCEEIAIIPSK	VC(UniMod:4)EEIAIIPSK	2	VC(UniMod:4)EEIAIIPSK2	18035.8	24641.3	19787.3
D3ZHW0	D3ZHW0	D3ZHW0_RAT	Dhx29	ATP-dependent RNA helicase DHX29	1	VCEELGCEGGPGGR	VC(UniMod:4)EELGC(UniMod:4)EGGPGGR	2	VC(UniMod:4)EELGC(UniMod:4)EGGPGGR2	3925.65	388.321	844.239
F1LR42	F1LR42	F1LR42_RAT	Rufy1	RUN and FYVE domain containing 1	1	VCEEQEQALQEMGLHLSQSK	VC(UniMod:4)EEQEQALQEMGLHLSQSK	3	VC(UniMod:4)EEQEQALQEMGLHLSQSK3	3116.91		3714.23
P08650	P08650	CO5_RAT	C5	Complement C5	1	VCEGAACK	VC(UniMod:4)EGAAC(UniMod:4)K	1	VC(UniMod:4)EGAAC(UniMod:4)K1			757.122
P08650	P08650	CO5_RAT	C5	Complement C5	1	VCEGAACK	VC(UniMod:4)EGAAC(UniMod:4)K	2	VC(UniMod:4)EGAAC(UniMod:4)K2			850942
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	VCEHLNLLEEDYFGLAVWDSTTSK	VC(UniMod:4)EHLNLLEEDYFGLAVWDSTTSK	3	VC(UniMod:4)EHLNLLEEDYFGLAVWDSTTSK3	13669.6	5325.93	
A0A0G2K162	Q9JMB3;A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	0	VCEHLNLLEK	VC(UniMod:4)EHLNLLEK	3	VC(UniMod:4)EHLNLLEK3	27757.1	22712	11637.8
A0A8I6AQW7	A0A8I6AQW7;Q8K3P4	A0A8I6AQW7_RAT	Msi2	Musashi RNA-binding protein 2	0	VCEIHFHEINNK	VC(UniMod:4)EIHFHEINNK	3	VC(UniMod:4)EIHFHEINNK3	12427.8	7991.13	6359.01
A0A8I6AQW7	A0A8I6AQW7;Q8K3P4	A0A8I6AQW7_RAT	Msi2	Musashi RNA-binding protein 2	0	VCEIHFHEINNK	VC(UniMod:4)EIHFHEINNK	4	VC(UniMod:4)EIHFHEINNK4	5088.54	3110.45	1491.81
D4A0Y4	D4A0Y4	D4A0Y4_RAT	Oxnad1	Oxidoreductase NAD-binding domain containing 1	1	VCEITHESPSVK	VC(UniMod:4)EITHESPSVK	3	VC(UniMod:4)EITHESPSVK3	14076	10221.5	
P16975	P16975	SPRC_RAT	Sparc	SPARC	1	VCELDESNTPMCVCQDPTSCPAPIGEFEK	VC(UniMod:4)ELDESNTPMC(UniMod:4)VC(UniMod:4)QDPTSC(UniMod:4)PAPIGEFEK	4	VC(UniMod:4)ELDESNTPMC(UniMod:4)VC(UniMod:4)QDPTSC(UniMod:4)PAPIGEFEK4	15431	20793.4	18893.4
P62828	Q8K586;P62828;Q66H11	RAN_RAT	Ran	GTP-binding nuclear protein Ran	0	VCENIPIVLCGNK	VC(UniMod:4)ENIPIVLC(UniMod:4)GNK	2	VC(UniMod:4)ENIPIVLC(UniMod:4)GNK2	78410	69024.4	60922.3
P62828	Q8K586;P62828;Q66H11	RAN_RAT	Ran	GTP-binding nuclear protein Ran	0	VCENIPIVLCGNK	VC(UniMod:4)ENIPIVLC(UniMod:4)GNK	3	VC(UniMod:4)ENIPIVLC(UniMod:4)GNK3	7602.99	6655.72	5138.16
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	VCEPCYEQLNK	VC(UniMod:4)EPC(UniMod:4)YEQLNK	2	VC(UniMod:4)EPC(UniMod:4)YEQLNK2	41626.6	40799.2	39068.1
Q9ESC2	Q9ESC2	TNMD_RAT	Tnmd	Tenomodulin	1	VCEPLLGYYPYPYCYQGGR	VC(UniMod:4)EPLLGYYPYPYC(UniMod:4)YQGGR	3	VC(UniMod:4)EPLLGYYPYPYC(UniMod:4)YQGGR3	8533.31	5612.68	8181.86
A0A0G2JXT6	A0A0G2JXT6	MTMR6_RAT	Mtmr6	Myotubularin-related protein 6	1	VCETYPR	VC(UniMod:4)ETYPR	2	VC(UniMod:4)ETYPR2	11290.8	9962.61	5660.81
P51792	P51792	CLCN3_RAT	Clcn3	H(+)/Cl(-) exchange transporter 3	1	VCFAQHTPSLPAESPR	VC(UniMod:4)FAQHTPSLPAESPR	3	VC(UniMod:4)FAQHTPSLPAESPR3	38805.2	26793.3	28572.3
P51792	P51792	CLCN3_RAT	Clcn3	H(+)/Cl(-) exchange transporter 3	1	VCFAQHTPSLPAESPRPLK	VC(UniMod:4)FAQHTPSLPAESPRPLK	3	VC(UniMod:4)FAQHTPSLPAESPRPLK3	4559.88	6138.09	
P51792	P51792	CLCN3_RAT	Clcn3	H(+)/Cl(-) exchange transporter 3	1	VCFAQHTPSLPAESPRPLK	VC(UniMod:4)FAQHTPSLPAESPRPLK	4	VC(UniMod:4)FAQHTPSLPAESPRPLK4	69208.7	70003.1	71038.4
Q4KLN7	Q4KLN7	ARFG3_RAT	Arfgap3	ADP-ribosylation factor GTPase-activating protein 3	1	VCFDCGAK	VC(UniMod:4)FDC(UniMod:4)GAK	2	VC(UniMod:4)FDC(UniMod:4)GAK2	12712.8	9746.41	
P10111	P10111	PPIA_RAT	Ppia	Peptidyl-prolyl cis-trans isomerase A	1	VCFELFADK	VC(UniMod:4)FELFADK	2	VC(UniMod:4)FELFADK2	1.03165e+06	906749	835573
P10111	P10111	PPIA_RAT	Ppia	Peptidyl-prolyl cis-trans isomerase A	1	VCFELFADKVPK	VC(UniMod:4)FELFADKVPK	2	VC(UniMod:4)FELFADKVPK2	32023.8	24493.3	21314
P10111	P10111	PPIA_RAT	Ppia	Peptidyl-prolyl cis-trans isomerase A	1	VCFELFADKVPK	VC(UniMod:4)FELFADKVPK	3	VC(UniMod:4)FELFADKVPK3	50354.9	56671.9	59004.2
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	VCFFEAGR	VC(UniMod:4)FFEAGR	2	VC(UniMod:4)FFEAGR2	27263.3	36209.7	32959.5
Q8R431	Q8R431	MGLL_RAT	Mgll	Monoglyceride lipase	1	VCFGIQLLNAVSR	VC(UniMod:4)FGIQLLNAVSR	2	VC(UniMod:4)FGIQLLNAVSR2	19568.8	25900	16187.5
D4A3T4	D4A3T4	D4A3T4_RAT	Zfyve1	Zinc finger FYVE-type containing 1	1	VCFNCNK	VC(UniMod:4)FNC(UniMod:4)NK	2	VC(UniMod:4)FNC(UniMod:4)NK2	4117.82	1013.37	8552.17
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	VCFYSNSFNPGK	VC(UniMod:4)FYSNSFNPGK	2	VC(UniMod:4)FYSNSFNPGK2	31395.2	23476.5	23122.1
A0A8I5Y6A1	A0A8I5Y6A1	A0A8I5Y6A1_RAT	Ablim1	Actin-binding LIM protein 1	1	VCGCDLAQGGFFIK	VC(UniMod:4)GC(UniMod:4)DLAQGGFFIK	2	VC(UniMod:4)GC(UniMod:4)DLAQGGFFIK2	2372.09	1052.58	807.801
P47816	P47816	PDCD2_RAT	Pdcd2	Programmed cell death protein 2	1	VCGCLAPMTCSR	VC(UniMod:4)GC(UniMod:4)LAPMTC(UniMod:4)SR	2	VC(UniMod:4)GC(UniMod:4)LAPMTC(UniMod:4)SR2	5766.86	5879.79	4895.87
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	VCGDAECSMLMYR	VC(UniMod:4)GDAEC(UniMod:4)SMLMYR	2	VC(UniMod:4)GDAEC(UniMod:4)SMLMYR2	13578.2	18114.8	16486.1
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	VCGDPEVTVDALRK	VC(UniMod:4)GDPEVTVDALRK	3	VC(UniMod:4)GDPEVTVDALRK3		17652.8	9458.21
F7ELS2	F7ELS2;A0A8I6GM53	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	0	VCGDSDKGFVVINQK	VC(UniMod:4)GDSDKGFVVINQK	3	VC(UniMod:4)GDSDKGFVVINQK3	24887.4	27491.2	16567.3
Q75WE7	Q75WE7	VWA5A_RAT	Vwa5a	von Willebrand factor A domain-containing protein 5A	1	VCGEFVFLMDR	VC(UniMod:4)GEFVFLMDR	2	VC(UniMod:4)GEFVFLMDR2	8046.14	4736.94	4889.14
A0A8I5ZNI3	A0A8I5ZNI3	A0A8I5ZNI3_RAT	Glipr1	GLI pathogenesis-related 1	1	VCGHYTQIVWADSYK	VC(UniMod:4)GHYTQIVWADSYK	2	VC(UniMod:4)GHYTQIVWADSYK2	2537.64	1725.37	1256.5
A0A8I5ZNI3	A0A8I5ZNI3	A0A8I5ZNI3_RAT	Glipr1	GLI pathogenesis-related 1	1	VCGHYTQIVWADSYK	VC(UniMod:4)GHYTQIVWADSYK	3	VC(UniMod:4)GHYTQIVWADSYK3	22685.5	16794.8	16486.1
Q9ESM0	Q9ESM0	IP6K1_RAT	Ip6k1	Inositol hexakisphosphate kinase 1	1	VCGMQVYQLDTGHYLCR	VC(UniMod:4)GMQVYQLDTGHYLC(UniMod:4)R	3	VC(UniMod:4)GMQVYQLDTGHYLC(UniMod:4)R3	5114.81	3297.96	3013.98
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	VCGQSPPFQFR	VC(UniMod:4)GQSPPFQFR	2	VC(UniMod:4)GQSPPFQFR2	47833.8	67572.5	56531.7
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	VCGSDGVTYGNECQLK	VC(UniMod:4)GSDGVTYGNEC(UniMod:4)QLK	2	VC(UniMod:4)GSDGVTYGNEC(UniMod:4)QLK2	8823.38	16839.5	12813.5
P60203	P60203	MYPR_RAT	Plp1	Myelin proteolipid protein	1	VCGSNLLSICK	VC(UniMod:4)GSNLLSIC(UniMod:4)K	2	VC(UniMod:4)GSNLLSIC(UniMod:4)K2	97991	93909.8	81925.1
F1M7P8	F1M7P8	F1M7P8_RAT	Spryd3	SPRY domain containing 3	1	VCGTLLEYLGK	VC(UniMod:4)GTLLEYLGK	2	VC(UniMod:4)GTLLEYLGK2	20476	17395.3	16431.7
Q6P6R2	Q6P6R2	DLDH_RAT	Dld	Dihydrolipoyl dehydrogenase, mitochondrial	1	VCHAHPTLSEAFR	VC(UniMod:4)HAHPTLSEAFR	2	VC(UniMod:4)HAHPTLSEAFR2	6417.91	2692.18	4736.72
Q6P6R2	Q6P6R2	DLDH_RAT	Dld	Dihydrolipoyl dehydrogenase, mitochondrial	1	VCHAHPTLSEAFR	VC(UniMod:4)HAHPTLSEAFR	3	VC(UniMod:4)HAHPTLSEAFR3	105862	68856.9	81708.4
Q6P6R2	Q6P6R2	DLDH_RAT	Dld	Dihydrolipoyl dehydrogenase, mitochondrial	1	VCHAHPTLSEAFR	VC(UniMod:4)HAHPTLSEAFR	4	VC(UniMod:4)HAHPTLSEAFR4	63976	45784.4	58924.4
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	VCHLGDQLEGVNTPR	VC(UniMod:4)HLGDQLEGVNTPR	2	VC(UniMod:4)HLGDQLEGVNTPR2	4520.38	5061.73	4888.98
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	VCHLGDQLEGVNTPR	VC(UniMod:4)HLGDQLEGVNTPR	3	VC(UniMod:4)HLGDQLEGVNTPR3	26383.2	37755.4	29113.5
Q9Z136	Q9Z136	TSC1_RAT	Tsc1	Hamartin	1	VCHTELLLSQVSQK	VC(UniMod:4)HTELLLSQVSQK	3	VC(UniMod:4)HTELLLSQVSQK3	7692.04	5260.54	3844.92
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	VCIDKDSGDVAALR	VC(UniMod:4)IDKDSGDVAALR	3	VC(UniMod:4)IDKDSGDVAALR3	49579.3	54766.6	50507.5
Q9WUC4	Q9WUC4	ATOX1_RAT	Atox1	Copper transport protein ATOX1	1	VCIESEHSSDILLATLNK	VC(UniMod:4)IESEHSSDILLATLNK	3	VC(UniMod:4)IESEHSSDILLATLNK3	10017.7	12761.2	6258.24
B2RYD0	B2RYD0	B2RYD0_RAT	Ube2g2	Ubiquitin-conjugating enzyme E2G 2	1	VCISILHAPGDDPMGYESSAER	VC(UniMod:4)ISILHAPGDDPMGYESSAER	3	VC(UniMod:4)ISILHAPGDDPMGYESSAER3	14112.5	17356.1	
D3ZAP9	D3ZAP9	D3ZAP9_RAT	Gpd1l1	Glycerol-3-phosphate dehydrogenase [NAD(+)]	1	VCIVGSGNWGSAVAK	VC(UniMod:4)IVGSGNWGSAVAK	2	VC(UniMod:4)IVGSGNWGSAVAK2	23569.8	8123.78	11339.1
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	VCLCEACATQEHR	VC(UniMod:4)LC(UniMod:4)EAC(UniMod:4)ATQEHR	3	VC(UniMod:4)LC(UniMod:4)EAC(UniMod:4)ATQEHR3	27564.9	29156.6	17351.8
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	VCLEDTPER	VC(UniMod:4)LEDTPER	2	VC(UniMod:4)LEDTPER2	57837.2	74737	68978.1
P97531	P97531	CIP4_RAT	Trip10	Cdc42-interacting protein 4	1	VCLELAK	VC(UniMod:4)LELAK	2	VC(UniMod:4)LELAK2	15236.1	17287.3	14310.8
B2RYM5	B2RYM5	BRCC3_RAT	Brcc3	Lys-63-specific deubiquitinase BRCC36	1	VCLESAVELPK	VC(UniMod:4)LESAVELPK	2	VC(UniMod:4)LESAVELPK2	76867.2	84727.1	91645.9
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	VCLLDVQPHTVK	VC(UniMod:4)LLDVQPHTVK	2	VC(UniMod:4)LLDVQPHTVK2		41252.7	31075.2
Q5U2Y3	Q5U2Y3	MPP7_RAT	Mpp7	MAGUK p55 subfamily member 7	1	VCLLDVQPHTVK	VC(UniMod:4)LLDVQPHTVK	3	VC(UniMod:4)LLDVQPHTVK3	18555.1	18130.9	23995.1
Q6GQP4	Q6GQP4;B0BN19	RAB31_RAT	Rab31	Ras-related protein Rab-31	0	VCLLGDTGVGK	VC(UniMod:4)LLGDTGVGK	2	VC(UniMod:4)LLGDTGVGK2	128245	122786	160313
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	VCLNLPYFLR	VC(UniMod:4)LNLPYFLR	2	VC(UniMod:4)LNLPYFLR2	19557	35821.7	26064.8
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	VCLQDQHYYSYVELPLACQGGR	VC(UniMod:4)LQDQHYYSYVELPLAC(UniMod:4)QGGR	3	VC(UniMod:4)LQDQHYYSYVELPLAC(UniMod:4)QGGR3	18144.4	25213.1	29854.2
Q8R492	Q8R492	Q8R492_RAT	Fap	Fibroblast activation protein, alpha	1	VCLQWLK	VC(UniMod:4)LQWLK	2	VC(UniMod:4)LQWLK2	7335.51	5055.82	7397.69
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	VCLSILNTWHGRPEEK	VC(UniMod:4)LSILNTWHGRPEEK	4	VC(UniMod:4)LSILNTWHGRPEEK4	11091.2	12647.7	11787.5
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	VCLWIGR	VC(UniMod:4)LWIGR	2	VC(UniMod:4)LWIGR2	234608	335285	252689
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	VCLYLTSCVNYVPEPENSALLR	VC(UniMod:4)LYLTSC(UniMod:4)VNYVPEPENSALLR	3	VC(UniMod:4)LYLTSC(UniMod:4)VNYVPEPENSALLR3	11404.1	9850.47	6113.29
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	VCMDFNIIQK	VC(UniMod:4)MDFNIIQK	2	VC(UniMod:4)MDFNIIQK2	24219.2	20689.4	18304.4
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	VCMDLNNTVPEYK	VC(UniMod:4)MDLNNTVPEYK	2	VC(UniMod:4)MDLNNTVPEYK2	68860.3	68200	66522.2
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	VCMVYDLYPTLTPLAIAYAR	VC(UniMod:4)MVYDLYPTLTPLAIAYAR	3	VC(UniMod:4)MVYDLYPTLTPLAIAYAR3	5215.93	10006.6	9035.48
P83941	P83941;A0A096MIY6;A0A8I6AKW3	ELOC_RAT	Eloc	Elongin-C	0	VCMYFTYK	VC(UniMod:4)MYFTYK	2	VC(UniMod:4)MYFTYK2	39109.2	37599.9	47057.9
Q5PQL2	Q5PQL2	CNOT9_RAT	Cnot9	CCR4-NOT transcription complex subunit 9	1	VCNALALLQCVASHPETR	VC(UniMod:4)NALALLQC(UniMod:4)VASHPETR	3	VC(UniMod:4)NALALLQC(UniMod:4)VASHPETR3	8901.97	8765.84	12858.9
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	VCNDEQLLLELQQIK	VC(UniMod:4)NDEQLLLELQQIK	2	VC(UniMod:4)NDEQLLLELQQIK2	10590.3	11914.6	7981.21
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	VCNDEQLLLELQQIK	VC(UniMod:4)NDEQLLLELQQIK	3	VC(UniMod:4)NDEQLLLELQQIK3	14705.2	8554.66	16286
P20650	P20650	PPM1A_RAT	Ppm1a	Protein phosphatase 1A	1	VCNEVVDTCLYK	VC(UniMod:4)NEVVDTC(UniMod:4)LYK	2	VC(UniMod:4)NEVVDTC(UniMod:4)LYK2	7891.32	9700.97	7744.03
G3V6K6	G3V6K6	G3V6K6_RAT	Egfr	Receptor protein-tyrosine kinase	1	VCNGIGIGEFK	VC(UniMod:4)NGIGIGEFK	2	VC(UniMod:4)NGIGIGEFK2	2489.15	4810.06	1257.75
Q02253	Q02253	MMSA_RAT	Aldh6a1	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial	1	VCNLIDSGAK	VC(UniMod:4)NLIDSGAK	2	VC(UniMod:4)NLIDSGAK2	72292.5	61391.4	78554.4
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	VCNPIISK	VC(UniMod:4)NPIISK	2	VC(UniMod:4)NPIISK2	203133	173003	210262
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	VCNPIITK	VC(UniMod:4)NPIITK	1	VC(UniMod:4)NPIITK1	13561.3	4341.06	10614.1
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	VCNPIITK	VC(UniMod:4)NPIITK	2	VC(UniMod:4)NPIITK2	3.18324e+06	3.04671e+06	3.5166e+06
D4A2G6	D4A2G6	D4A2G6_RAT	Thbs2	Thrombospondin 2	1	VCNSPEPQYGGK	VC(UniMod:4)NSPEPQYGGK	2	VC(UniMod:4)NSPEPQYGGK2	12184.4	6875.07	9984.13
Q9R1Z0	Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	1	VCNYGLIFTQK	VC(UniMod:4)NYGLIFTQK	2	VC(UniMod:4)NYGLIFTQK2	862384	819918	846121
Q9R1Z0	Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	1	VCNYGLIFTQK	VC(UniMod:4)NYGLIFTQK	3	VC(UniMod:4)NYGLIFTQK3	18885.5	14220.4	21325.6
P32821	P32821	TRYA_RAT		Trypsin V-A	1	VCNYLNWIHQTIAEN	VC(UniMod:4)NYLNWIHQTIAEN	2	VC(UniMod:4)NYLNWIHQTIAEN2	17497.1	12324.3	11523
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	VCPAGTAACLLK	VC(UniMod:4)PAGTAAC(UniMod:4)LLK	2	VC(UniMod:4)PAGTAAC(UniMod:4)LLK2	118018	119174	85228.6
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	VCPATESTYSDEFYNK	VC(UniMod:4)PATESTYSDEFYNK	2	VC(UniMod:4)PATESTYSDEFYNK2	28647.8	33024.4	41778.3
Q76LD0	Q76LD0	CRDL1_RAT	Chrdl1	Chordin-like protein 1	1	VCPEEPPSQNFDSK	VC(UniMod:4)PEEPPSQNFDSK	2	VC(UniMod:4)PEEPPSQNFDSK2	2892.93		
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	VCPFAGILENGVVR	VC(UniMod:4)PFAGILENGVVR	2	VC(UniMod:4)PFAGILENGVVR2	3.51218e+06	3.2132e+06	3.56789e+06
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	VCPFAGILENGVVR	VC(UniMod:4)PFAGILENGVVR	3	VC(UniMod:4)PFAGILENGVVR3	865338	812559	854775
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	VCPLGFQEDSHGCLICK	VC(UniMod:4)PLGFQEDSHGC(UniMod:4)LIC(UniMod:4)K	3	VC(UniMod:4)PLGFQEDSHGC(UniMod:4)LIC(UniMod:4)K3	128853	135126	112158
Q68FQ9	Q68FQ9	Q68FQ9_RAT	Lancl2	LanC lantibiotic synthetase component C-like 2 (Bacterial)	1	VCPLPTTEDPGLPFHPNGK	VC(UniMod:4)PLPTTEDPGLPFHPNGK	3	VC(UniMod:4)PLPTTEDPGLPFHPNGK3	11959.1	15538.4	12194.3
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	VCPLVIK	VC(UniMod:4)PLVIK	2	VC(UniMod:4)PLVIK2	36749.3	34169.4	29085.1
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	VCPQTDAENVTDNK	VC(UniMod:4)PQTDAENVTDNK	2	VC(UniMod:4)PQTDAENVTDNK2	23992.2	32677.5	31546.9
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	VCPSLQDK	VC(UniMod:4)PSLQDK	2	VC(UniMod:4)PSLQDK2	130916	145376	124118
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	VCPVGFLMTETAVGIR	VC(UniMod:4)PVGFLMTETAVGIR	2	VC(UniMod:4)PVGFLMTETAVGIR2	43087	38406.3	27450.7
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	VCPVGFLMTETAVGIR	VC(UniMod:4)PVGFLMTETAVGIR	3	VC(UniMod:4)PVGFLMTETAVGIR3	24216.7	35004.9	31453.4
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	VCPVLIDLTAPDSNDDVK	VC(UniMod:4)PVLIDLTAPDSNDDVK	3	VC(UniMod:4)PVLIDLTAPDSNDDVK3	18161.9	19069.1	25531.8
Q9Z1Y3	Q9Z1Y3	CADH2_RAT	Cdh2	Cadherin-2	1	VCQCDSNGDCTDVDR	VC(UniMod:4)QC(UniMod:4)DSNGDC(UniMod:4)TDVDR	2	VC(UniMod:4)QC(UniMod:4)DSNGDC(UniMod:4)TDVDR2		1074.71	
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	VCQELSTLGK	VC(UniMod:4)QELSTLGK	2	VC(UniMod:4)QELSTLGK2	768829	529508	438727
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	VCQELSTLGKDDFR	VC(UniMod:4)QELSTLGKDDFR	2	VC(UniMod:4)QELSTLGKDDFR2	1722.87	872.734	1491.33
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	VCQELSTLGKDDFR	VC(UniMod:4)QELSTLGKDDFR	3	VC(UniMod:4)QELSTLGKDDFR3	78278.5	49623.3	43449.5
B1WC37	B1WC37	MTU1_RAT	Trmu	Mitochondrial tRNA-specific 2-thiouridylase 1	1	VCQILDIPFHQVSYVK	VC(UniMod:4)QILDIPFHQVSYVK	3	VC(UniMod:4)QILDIPFHQVSYVK3	2180.08		
P15127	P15127	INSR_RAT	Insr	Insulin receptor	1	VCQILEGEK	VC(UniMod:4)QILEGEK	2	VC(UniMod:4)QILEGEK2	985.373	5019.31	7519.39
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	VCQLLVNEQEPCK	VC(UniMod:4)QLLVNEQEPC(UniMod:4)K	2	VC(UniMod:4)QLLVNEQEPC(UniMod:4)K2	23355	24274.8	18513
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	VCQLLVNEQEPCK	VC(UniMod:4)QLLVNEQEPC(UniMod:4)K	3	VC(UniMod:4)QLLVNEQEPC(UniMod:4)K3	4610.83	6529.77	
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	VCQLMEHDSYK	VC(UniMod:4)QLMEHDSYK	2	VC(UniMod:4)QLMEHDSYK2	11456.3	9665.14	8976.2
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	VCQLMEHDSYK	VC(UniMod:4)QLMEHDSYK	3	VC(UniMod:4)QLMEHDSYK3	58372.5	50316.9	56985.8
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	VCQLMEHDSYKR	VC(UniMod:4)QLMEHDSYKR	2	VC(UniMod:4)QLMEHDSYKR2	3225.99	4423.48	4008.43
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	VCQLMEHDSYKR	VC(UniMod:4)QLMEHDSYKR	3	VC(UniMod:4)QLMEHDSYKR3	90908.1	73757.6	75333.6
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	VCQLMEHDSYKR	VC(UniMod:4)QLMEHDSYKR	4	VC(UniMod:4)QLMEHDSYKR4	71298.3	113612	94074.2
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	VCQMLLR	VC(UniMod:4)QMLLR	2	VC(UniMod:4)QMLLR2	36583.4	54672.5	42087.4
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	VCQPGYLNILVSK	VC(UniMod:4)QPGYLNILVSK	2	VC(UniMod:4)QPGYLNILVSK2	99573.6	113932	118161
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	VCQPGYLNILVSK	VC(UniMod:4)QPGYLNILVSK	3	VC(UniMod:4)QPGYLNILVSK3	1897.19	5413.71	2369.1
Q4V888	Q4V888	PP4P2_RAT	Pip4p2	Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase	1	VCQSLINLDGK	VC(UniMod:4)QSLINLDGK	2	VC(UniMod:4)QSLINLDGK2	24894.5	20097.3	24683.3
Q5PPM8	Q5PPM8	PP4P1_RAT	Pip4p1	Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase	1	VCQSPINVEGK	VC(UniMod:4)QSPINVEGK	2	VC(UniMod:4)QSPINVEGK2	11502.9	6828.53	8949.11
G3V8Z6	G3V8Z6	G3V8Z6_RAT	Krit1	KRIT1, ankyrin repeat containing	1	VCSESSTHFATLTAR	VC(UniMod:4)SESSTHFATLTAR	3	VC(UniMod:4)SESSTHFATLTAR3	14967.3	11906.9	15754.8
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	VCSMSGQR	VC(UniMod:4)SMSGQR	2	VC(UniMod:4)SMSGQR2			40595.3
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	VCSPNER	VC(UniMod:4)SPNER	2	VC(UniMod:4)SPNER2			54207.2
Q6P7C7	Q6P7C7	GPNMB_RAT	Gpnmb	Transmembrane glycoprotein NMB	1	VCSPVAVDELCLLSVR	VC(UniMod:4)SPVAVDELC(UniMod:4)LLSVR	2	VC(UniMod:4)SPVAVDELC(UniMod:4)LLSVR2	10315.1	7162.57	4320.67
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	VCSQYAAYGK	VC(UniMod:4)SQYAAYGK	2	VC(UniMod:4)SQYAAYGK2	1.12281e+06	840984	670979
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	VCSSPPIHMK	VC(UniMod:4)SSPPIHMK	2	VC(UniMod:4)SSPPIHMK2	87344.4	97924.2	82772.7
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	VCSSPPIHMK	VC(UniMod:4)SSPPIHMK	3	VC(UniMod:4)SSPPIHMK3	1.01427e+06	1.06228e+06	1.05348e+06
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	VCSTPHIQDGGR	VC(UniMod:4)STPHIQDGGR	2	VC(UniMod:4)STPHIQDGGR2	9907.47	10808.8	8826.87
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	VCSTPHIQDGGR	VC(UniMod:4)STPHIQDGGR	3	VC(UniMod:4)STPHIQDGGR3	214751	216293	240489
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	VCTESGVTSDHLK	VC(UniMod:4)TESGVTSDHLK	3	VC(UniMod:4)TESGVTSDHLK3	8669.59	11719.8	12852.1
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	VCTETEFACHSYNECVALEYR	VC(UniMod:4)TETEFAC(UniMod:4)HSYNEC(UniMod:4)VALEYR	3	VC(UniMod:4)TETEFAC(UniMod:4)HSYNEC(UniMod:4)VALEYR3	8522.41	12000.4	8952.17
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	VCTFGAVCSAGQCVCPR	VC(UniMod:4)TFGAVC(UniMod:4)SAGQC(UniMod:4)VC(UniMod:4)PR	2	VC(UniMod:4)TFGAVC(UniMod:4)SAGQC(UniMod:4)VC(UniMod:4)PR2	3377.52	6916.14	
P62890	P62890	RL30_RAT	Rpl30	Large ribosomal subunit protein eL30	1	VCTLAIIDPGDSDIIR	VC(UniMod:4)TLAIIDPGDSDIIR	2	VC(UniMod:4)TLAIIDPGDSDIIR2	33095.9	26376.9	26615.5
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	VCTNGSCTNLEGSYMCSCHK	VC(UniMod:4)TNGSC(UniMod:4)TNLEGSYMC(UniMod:4)SC(UniMod:4)HK	3	VC(UniMod:4)TNGSC(UniMod:4)TNLEGSYMC(UniMod:4)SC(UniMod:4)HK3	2983.87	4320.23	
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	VCTTELSCK	VC(UniMod:4)TTELSC(UniMod:4)K	2	VC(UniMod:4)TTELSC(UniMod:4)K2	618841	636632	588713
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	VCTVADLCQK	VC(UniMod:4)TVADLC(UniMod:4)QK	2	VC(UniMod:4)TVADLC(UniMod:4)QK2	6975.72	7954.15	4408.38
Q05511	Q05511	HEPS_RAT	Hpn	Serine protease hepsin	1	VCTVTGWGNTQFYGQQAVVLQEAR	VC(UniMod:4)TVTGWGNTQFYGQQAVVLQEAR	3	VC(UniMod:4)TVTGWGNTQFYGQQAVVLQEAR3	11345.4	5932.71	7918.47
G3V9M6	F1M5Q4;G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	0	VCVDTHMR	VC(UniMod:4)VDTHMR	2	VC(UniMod:4)VDTHMR2	20550	23039.1	15442.6
A0A8I5Y1T6	Q9JMB3;A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	0	VCVEHHTFFR	VC(UniMod:4)VEHHTFFR	3	VC(UniMod:4)VEHHTFFR3	87771.3	67071	59167.4
O70540	O70540	MADCA_RAT	Madcam1	Mucosal addressin cell adhesion molecule 1	1	VCVGSCGSR	VC(UniMod:4)VGSC(UniMod:4)GSR	2	VC(UniMod:4)VGSC(UniMod:4)GSR2	161852	196310	191061
Q9ES71	Q9ES71	GNPAT_RAT	Gnpat	Dihydroxyacetone phosphate acyltransferase	1	VCVNEEGIQK	VC(UniMod:4)VNEEGIQK	2	VC(UniMod:4)VNEEGIQK2	8400.48	11405.1	4832.55
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	VCVQTVESGAMTK	VC(UniMod:4)VQTVESGAMTK	2	VC(UniMod:4)VQTVESGAMTK2	129550	121807	128480
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	VCVSLLGTWIGK	VC(UniMod:4)VSLLGTWIGK	2	VC(UniMod:4)VSLLGTWIGK2	72306.5	101015	85956.2
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	VDAALHTMLLK	VDAALHTMLLK	2	VDAALHTMLLK2	1187.91		
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	VDAALHTMLLK	VDAALHTMLLK	3	VDAALHTMLLK3	18528.7	21647.4	20617.5
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	VDAAMAGR	VDAAMAGR	1	VDAAMAGR1	3.69777e+06	3.55795e+06	3.54891e+06
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	VDAAMAGR	VDAAMAGR	2	VDAAMAGR2	102107	142263	951103
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	VDAAMAGRIYITGSTFR	VDAAMAGRIYITGSTFR	3	VDAAMAGRIYITGSTFR3	7386.03	13066.7	9270.93
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	VDAAMAGRIYITGSTFRSVQAK	VDAAMAGRIYITGSTFRSVQAK	3	VDAAMAGRIYITGSTFRSVQAK3	8602.66	5830.96	1350.72
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	VDAAMAGRIYITGSTFRSVQAK	VDAAMAGRIYITGSTFRSVQAK	4	VDAAMAGRIYITGSTFRSVQAK4	10289.2	5516.77	
A0A096MJT6	A0A096MJT6	A0A096MJT6_RAT	Bltp1	Similar to RIKEN cDNA D630029K19	1	VDAASPGPR	VDAASPGPR	2	VDAASPGPR2	5544.41	5173.43	
A0A0G2K0I6	A0A0G2K0I6	A0A0G2K0I6_RAT	Cdh5	Cadherin 5	1	VDADTGDVLAYER	VDADTGDVLAYER	2	VDADTGDVLAYER2	41146.3	30651.2	34497.3
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	VDAECMPVVR	VDAEC(UniMod:4)MPVVR	2	VDAEC(UniMod:4)MPVVR2	93763	85969.7	80990.9
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	VDAGQKK	VDAGQKK	1	VDAGQKK1			14009.9
P11348	P11348	DHPR_RAT	Qdpr	Dihydropteridine reductase	1	VDAILCVAGGWAGGNAK	VDAILC(UniMod:4)VAGGWAGGNAK	2	VDAILC(UniMod:4)VAGGWAGGNAK2	4575.23	4430.2	
F7F5P9	F7F5P9	F7F5P9_RAT	G3bp2	G3BP stress granule assembly factor 2	1	VDAKPEVQSQPPR	VDAKPEVQSQPPR	2	VDAKPEVQSQPPR2	11747.8	6687.95	8932.53
F7F5P9	F7F5P9	F7F5P9_RAT	G3bp2	G3BP stress granule assembly factor 2	1	VDAKPEVQSQPPR	VDAKPEVQSQPPR	3	VDAKPEVQSQPPR3	61118.1	62863.3	75480.9
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	VDALGEALQTTVSR	VDALGEALQTTVSR	2	VDALGEALQTTVSR2	271195	279163	258457
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	VDALGEALQTTVSR	VDALGEALQTTVSR	3	VDALGEALQTTVSR3	95925	110665	114862
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	VDALLSAQPK	VDALLSAQPK	2	VDALLSAQPK2	324443	405590	381253
Q6P6Q2	Q6P6Q2	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	1	VDALMDEINFMK	VDALMDEINFMK	2	VDALMDEINFMK2	20522.2	12917.8	15620.4
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	VDALQVLK	VDALQVLK	2	VDALQVLK2	62401.3	70557.8	52964.2
P97586	P97586	CGRE1_RAT	Cgref1	Cell growth regulator with EF hand domain protein 1	1	VDALSPEGEAR	VDALSPEGEAR	2	VDALSPEGEAR2	2.81588e+06	3.28219e+06	3.06276e+06
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	VDAQFGGIDQR	VDAQFGGIDQR	2	VDAQFGGIDQR2	23914.5	36214.2	35442.4
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	VDATADYICK	VDATADYIC(UniMod:4)K	2	VDATADYIC(UniMod:4)K2	33553.5	16737.3	16098.2
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	VDATDASYPSVNTCVHYLK	VDATDASYPSVNTC(UniMod:4)VHYLK	3	VDATDASYPSVNTC(UniMod:4)VHYLK3	15927.4	18247	17920.7
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	VDATEESDLAQQYGVR	VDATEESDLAQQYGVR	2	VDATEESDLAQQYGVR2	934438	1.01784e+06	982024
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	VDATEESDLAQQYGVR	VDATEESDLAQQYGVR	3	VDATEESDLAQQYGVR3	244549	293876	322442
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	VDATEQTDLAK	VDATEQTDLAK	2	VDATEQTDLAK2	588664	607655	606336
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	VDATEQTDLAKR	VDATEQTDLAKR	2	VDATEQTDLAKR2	2546.47		
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	VDATEQTDLAKR	VDATEQTDLAKR	3	VDATEQTDLAKR3	29364.5	49774.6	41730.7
Q5RJZ6	Q5RJZ6	SCOC_RAT	Scoc	Short coiled-coil protein	1	VDAVKEENLK	VDAVKEENLK	2	VDAVKEENLK2	5532.31	6452.25	
P0C5W1	P0C5W1	MAP1S_RAT	Map1s	Microtubule-associated protein 1S	1	VDAVLVTHAGADSLPGLNSLLR	VDAVLVTHAGADSLPGLNSLLR	3	VDAVLVTHAGADSLPGLNSLLR3	20215	12227.2	13996.4
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	VDAWVGTYFEVK	VDAWVGTYFEVK	2	VDAWVGTYFEVK2	14274.7	18060.5	18430.1
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	VDAYGNLLVCAHGFNFIR	VDAYGNLLVC(UniMod:4)AHGFNFIR	3	VDAYGNLLVC(UniMod:4)AHGFNFIR3	41100	55492.7	41091.8
B2RYN0	B2RYN0	B2RYN0_RAT	Pgm3	Phosphoacetylglucosamine mutase	1	VDCANGIGALK	VDC(UniMod:4)ANGIGALK	2	VDC(UniMod:4)ANGIGALK2	2510.42	2339.2	2089.15
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	VDCDQHSDIAQR	VDC(UniMod:4)DQHSDIAQR	2	VDC(UniMod:4)DQHSDIAQR2	29811.8	45034.3	31753.7
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	VDCDQHSDIAQR	VDC(UniMod:4)DQHSDIAQR	3	VDC(UniMod:4)DQHSDIAQR3	150261	143428	175592
D3ZL10	D3ZL10	D3ZL10_RAT	Col6a6	Collagen type VI alpha 6 chain	1	VDCEIEK	VDC(UniMod:4)EIEK	2	VDC(UniMod:4)EIEK2	8638.15	8869.85	10059.1
Q498R3	Q498R3	DJC10_RAT	Dnajc10	DnaJ homolog subfamily C member 10	1	VDCQAYPQTCQK	VDC(UniMod:4)QAYPQTC(UniMod:4)QK	2	VDC(UniMod:4)QAYPQTC(UniMod:4)QK2	17443.4	29410.1	31397.5
Q6QMY6	Q6QMY6	TSK_RAT	Tsku	Tsukushi	1	VDCSSLGPHIVPVPIPLDTAHLDLSSNR	VDC(UniMod:4)SSLGPHIVPVPIPLDTAHLDLSSNR	4	VDC(UniMod:4)SSLGPHIVPVPIPLDTAHLDLSSNR4	96327.3	92926.5	99691.2
D3ZZC1	D3ZZC1	D3ZZC1_RAT	Txndc5	protein disulfide-isomerase	1	VDCTANSDVCSAQGVR	VDC(UniMod:4)TANSDVC(UniMod:4)SAQGVR	2	VDC(UniMod:4)TANSDVC(UniMod:4)SAQGVR2	26652.4	25056.4	21586.8
D3ZZC1	D3ZZC1	D3ZZC1_RAT	Txndc5	protein disulfide-isomerase	1	VDCTANSDVCSAQGVR	VDC(UniMod:4)TANSDVC(UniMod:4)SAQGVR	3	VDC(UniMod:4)TANSDVC(UniMod:4)SAQGVR3		3296.08	3170.44
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	VDCTANTNTCNK	VDC(UniMod:4)TANTNTC(UniMod:4)NK	2	VDC(UniMod:4)TANTNTC(UniMod:4)NK2			36244
D3ZZC1	D3ZZC1	D3ZZC1_RAT	Txndc5	protein disulfide-isomerase	1	VDCTQHYAVCSEHQVR	VDC(UniMod:4)TQHYAVC(UniMod:4)SEHQVR	3	VDC(UniMod:4)TQHYAVC(UniMod:4)SEHQVR3	6904.32	12110.3	6506.15
D3ZZC1	D3ZZC1	D3ZZC1_RAT	Txndc5	protein disulfide-isomerase	1	VDCTQHYAVCSEHQVR	VDC(UniMod:4)TQHYAVC(UniMod:4)SEHQVR	4	VDC(UniMod:4)TQHYAVC(UniMod:4)SEHQVR4	33260.6	32058.8	40007.3
F1M386	F1M386	RPGF2_RAT	Rapgef2	Rap guanine nucleotide exchange factor 2	1	VDDCQFVCIAQQDYCR	VDDC(UniMod:4)QFVC(UniMod:4)IAQQDYC(UniMod:4)R	3	VDDC(UniMod:4)QFVC(UniMod:4)IAQQDYC(UniMod:4)R3	1482.14		1530.8
A0A8I6AEZ7	A0A8I6AEZ7	A0A8I6AEZ7_RAT	Crlf3	Cytokine receptor-like factor 3	1	VDDDFTAQDYR	VDDDFTAQDYR	2	VDDDFTAQDYR2	198461	197501	163151
Q1HCL7	Q1HCL7	NAKD2_RAT	Nadk2	NAD kinase 2, mitochondrial	1	VDDERSEASGPQLLPVR	VDDERSEASGPQLLPVR	3	VDDERSEASGPQLLPVR3	4078	5323.31	8435.39
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	VDDFLAK	VDDFLAK	2	VDDFLAK2	79489.9	75867.7	76804
E9PTA5	E9PTA5	E9PTA5_RAT	Pign	GPI ethanolamine phosphate transferase 1	1	VDDGVKEIVSIFK	VDDGVKEIVSIFK	3	VDDGVKEIVSIFK3			6505.98
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	VDDIDDK	VDDIDDK	2	VDDIDDK2		19234.7	
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	VDDIICDSR	VDDIIC(UniMod:4)DSR	2	VDDIIC(UniMod:4)DSR2	50374.2	70386.1	49482.8
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	VDDLDIHQVSTAGQPSK	VDDLDIHQVSTAGQPSK	3	VDDLDIHQVSTAGQPSK3	6634.48	10578.4	9753.4
Q9Z254	Q9Z254	GIPC1_RAT	Gipc1	PDZ domain-containing protein GIPC1	1	VDDLLESYMGIR	VDDLLESYMGIR	2	VDDLLESYMGIR2	26133.3	24710.7	22585.8
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VDDLLIIEEK	VDDLLIIEEK	2	VDDLLIIEEK2	116705	110766	96044.7
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	VDDLNKEIQK	VDDLNKEIQK	2	VDDLNKEIQK2	3164.88	4484.81	7029.58
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	VDDLNKEIQK	VDDLNKEIQK	3	VDDLNKEIQK3	86729.9	85822.1	89417.1
D3ZW58	D3ZW58	D3ZW58_RAT	Golm2	Golgi membrane protein 2	1	VDDLPAALK	VDDLPAALK	2	VDDLPAALK2	11981.8	15346.1	11937.9
Q3ZU82	Q3ZU82	GOGA5_RAT	Golga5	Golgin subfamily A member 5	1	VDDLQQQVK	VDDLQQQVK	2	VDDLQQQVK2	13368.8	12672.9	14160.1
Q5XIB4	Q5XIB4	UFSP2_RAT	Ufsp2	Ufm1-specific protease 2	1	VDDNGWGCAYR	VDDNGWGC(UniMod:4)AYR	2	VDDNGWGC(UniMod:4)AYR2	4707.54		
A0A8I5ZLY7	A0A8I5ZLY7	A0A8I5ZLY7_RAT	Tapbp	TAP binding protein	1	VDDPAGMLLAAFR	VDDPAGMLLAAFR	2	VDDPAGMLLAAFR2	22947.8	18028.3	28371
A0A8I5ZLY7	A0A8I5ZLY7	A0A8I5ZLY7_RAT	Tapbp	TAP binding protein	1	VDDPAGMLLAAFR	VDDPAGMLLAAFR	3	VDDPAGMLLAAFR3	10472.3	15291.1	10905.8
A0A8I6GM43	A0A8I6GM43	A0A8I6GM43_RAT	Pbdc1	Polysaccharide biosynthesis domain containing 1	1	VDDQIYSEFR	VDDQIYSEFR	2	VDDQIYSEFR2	22323.8	22624.9	18711.2
A0A8I6GM43	A0A8I6GM43	A0A8I6GM43_RAT	Pbdc1	Polysaccharide biosynthesis domain containing 1	1	VDDQIYSEFRENFETLR	VDDQIYSEFRENFETLR	3	VDDQIYSEFRENFETLR3	12038.8	24525.6	26943.2
A0A8I5ZPZ9	A0A8I5ZPZ9	A0A8I5ZPZ9_RAT	Ptpa	Serine/threonine-protein phosphatase 2A activator	1	VDDQVAIVFK	VDDQVAIVFK	2	VDDQVAIVFK2	13150.4	6329.41	
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	VDDQVTHIR	VDDQVTHIR	2	VDDQVTHIR2	6579.79	7865.95	4772.92
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	VDDSSGSIGR	VDDSSGSIGR	2	VDDSSGSIGR2	43149.4	46985.6	48479.1
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	VDDVAALDK	VDDVAALDK	2	VDDVAALDK2	147661	140458	127042
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	VDDVAALDKK	VDDVAALDKK	2	VDDVAALDKK2	6045.51	992.749	3715.18
P16573	P16573	CEAM1_RAT	Ceacam1	Carcinoembryonic antigen-related cell adhesion molecule 1	1	VDDVSYSVLNFNAQQSK	VDDVSYSVLNFNAQQSK	2	VDDVSYSVLNFNAQQSK2	127515	133735	145178
P16573	P16573	CEAM1_RAT	Ceacam1	Carcinoembryonic antigen-related cell adhesion molecule 1	1	VDDVSYSVLNFNAQQSK	VDDVSYSVLNFNAQQSK	3	VDDVSYSVLNFNAQQSK3	100617	110934	116537
A0A8I5ZS34	A0A8I5ZS34	A0A8I5ZS34_RAT	Ctdsp1	protein-serine/threonine phosphatase	1	VDDVYSVLR	VDDVYSVLR	2	VDDVYSVLR2	45174.5	45865.3	41653.8
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	VDEAIALFQK	VDEAIALFQK	2	VDEAIALFQK2	85898.8	112456	116819
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	VDEAMMGK	VDEAMMGK	2	VDEAMMGK2	6750.09	7042.98	3854.9
G3V9N0	D3ZSR2;G3V9N0	G3V9N0_RAT	Pabpc4	Polyadenylate-binding protein	0	VDEAVAVLQAHHAK	VDEAVAVLQAHHAK	3	VDEAVAVLQAHHAK3	7946.03	4739.32	
Q9EPH8	Q9EPH8	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	1	VDEAVAVLQAHQAK	VDEAVAVLQAHQAK	2	VDEAVAVLQAHQAK2	9634.5	4905.88	2147.67
Q9EPH8	Q9EPH8	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	1	VDEAVAVLQAHQAK	VDEAVAVLQAHQAK	3	VDEAVAVLQAHQAK3	44610.9	50786.5	33539
P20651	P20651	PP2BB_RAT	Ppp3cb	Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform	1	VDEEIALR	VDEEIALR	2	VDEEIALR2	16111.2	11064.2	10963.4
A0A8I6A371	A0A8I6A371	A0A8I6A371_RAT	Nmi	N-myc (and STAT) interactor	1	VDEETGEDLLNIHFQR	VDEETGEDLLNIHFQR	3	VDEETGEDLLNIHFQR3	6257		12230.1
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	VDEETQEVLGNLR	VDEETQEVLGNLR	2	VDEETQEVLGNLR2	127865	138742	142411
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	VDEETQEVLGNLR	VDEETQEVLGNLR	3	VDEETQEVLGNLR3	49338.6	63191.8	66165.7
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	VDEETQEVLGNLRDR	VDEETQEVLGNLRDR	3	VDEETQEVLGNLRDR3	20194.2	27404.9	37149.9
G3V6R9	G3V6R9	G3V6R9_RAT	Bloc1s4	Biogenesis of lysosomal organelles complex 1 subunit 4	1	VDEFVGMLDMIR	VDEFVGMLDMIR	2	VDEFVGMLDMIR2	20784.7	16327.5	17310.1
P12711	P12711	ADHX_RAT	Adh5	Alcohol dehydrogenase class-3	1	VDEFVTGNLSFDQINK	VDEFVTGNLSFDQINK	2	VDEFVTGNLSFDQINK2	9268.99	6484.39	7907.63
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	VDEGGWNTVQGAK	VDEGGWNTVQGAK	2	VDEGGWNTVQGAK2	10606	7411.32	9616.65
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	VDEIDAAIQR	VDEIDAAIQR	2	VDEIDAAIQR2	70718.1	79407.7	79016.1
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	VDEIVVLSGDNSK	VDEIVVLSGDNSK	2	VDEIVVLSGDNSK2	35199.6	36801.5	45373.7
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	VDEKTKEVIQEWSLTNIK	VDEKTKEVIQEWSLTNIK	3	VDEKTKEVIQEWSLTNIK3	14587	11091.5	12266.3
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	VDELLEK	VDELLEK	2	VDELLEK2	67564.1	46597.1	46173.1
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	VDELTCEK	VDELTC(UniMod:4)EK	2	VDELTC(UniMod:4)EK2	70557	62297.1	57404.4
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	VDELTTDLEILK	VDELTTDLEILK	2	VDELTTDLEILK2	179982	148690	152013
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	VDELYEGYCIQWR	VDELYEGYC(UniMod:4)IQWR	2	VDELYEGYC(UniMod:4)IQWR2	26639.2	26295.7	29539
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	VDELYEGYCIQWR	VDELYEGYC(UniMod:4)IQWR	3	VDELYEGYC(UniMod:4)IQWR3	3405.39	4629.39	
Q6P9U8	Q6P9U8	EIF3H_RAT	Eif3h	Eukaryotic translation initiation factor 3 subunit H	1	VDEMSQDIIK	VDEMSQDIIK	2	VDEMSQDIIK2	80101.1	75410.8	80663
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	VDENNPEYLR	VDENNPEYLR	2	VDENNPEYLR2	130659	129121	121129
P59622	P59622	SLAP1_RAT	Sla	Src-like-adapter	1	VDESLFSYGLR	VDESLFSYGLR	2	VDESLFSYGLR2	8746.7	8592.06	8595.56
Q5M9F6	Q5M9F6	Q5M9F6_RAT	Mthfs	5-formyltetrahydrofolate cyclo-ligase	1	VDEVLYEDSPTS	VDEVLYEDSPTS	2	VDEVLYEDSPTS2		6756.07	
D4A7X9	D4A7X9	D4A7X9_RAT	Myo1f	Myosin IF	1	VDFADSVTK	VDFADSVTK	2	VDFADSVTK2	3175.89		
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	VDFAELPVPPGFPPIPGLEPR	VDFAELPVPPGFPPIPGLEPR	3	VDFAELPVPPGFPPIPGLEPR3	10662.5	8994.6	15569
A0A8I6AA52	A0A8I6AA52	A0A8I6AA52_RAT	Wdr48	WD repeat-containing protein 48	1	VDFEDEIK	VDFEDEIK	2	VDFEDEIK2	5648.42	11190.5	10109
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	VDFEQLTENLGQLECR	VDFEQLTENLGQLEC(UniMod:4)R	2	VDFEQLTENLGQLEC(UniMod:4)R2	57903.3	48395.6	42159.1
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	VDFEQLTENLGQLECR	VDFEQLTENLGQLEC(UniMod:4)R	3	VDFEQLTENLGQLEC(UniMod:4)R3	91879.2	104131	93368.8
O54858	O54858	CBPZ_RAT	Cpz	Carboxypeptidase Z	1	VDFILQPLGTGPK	VDFILQPLGTGPK	2	VDFILQPLGTGPK2	6605	5292.36	
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	VDFLPPIGVENR	VDFLPPIGVENR	2	VDFLPPIGVENR2	77660.4	75703.6	69499.3
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	VDFLPPIGVENREPADATIR	VDFLPPIGVENREPADATIR	3	VDFLPPIGVENREPADATIR3	136091	191421	168559
P16617	Q5XIV1;A0A8I6A6N5;P16617	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	0	VDFNVPMK	VDFNVPMK	2	VDFNVPMK2	387729	312794	382948
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	VDFPQDQLATLTGR	VDFPQDQLATLTGR	2	VDFPQDQLATLTGR2	606915	494816	573655
P04636	P04636	MDHM_RAT	Mdh2	Malate dehydrogenase, mitochondrial	1	VDFPQDQLATLTGR	VDFPQDQLATLTGR	3	VDFPQDQLATLTGR3	63666.6	51117.8	58209.4
P62997	P62997;A0A8I6AB81	TRA2B_RAT	Tra2b	Transformer-2 protein homolog beta	0	VDFSITK	VDFSITK	2	VDFSITK2	18806.4	13517.8	9791.66
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	VDFTEEEINNMK	VDFTEEEINNMK	2	VDFTEEEINNMK2	29555.1	29043.1	20170.6
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	VDFTEEEISNMR	VDFTEEEISNMR	2	VDFTEEEISNMR2	34075.9	18992.1	29536.2
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	VDFTEEEISNMR	VDFTEEEISNMR	3	VDFTEEEISNMR3	3310.11	6457.12	4511.69
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	VDFTEEEISNMRK	VDFTEEEISNMRK	3	VDFTEEEISNMRK3	49416.8	40866.7	50611
P18395	P18395	CSDE1_RAT	Csde1	Cold shock domain-containing protein E1	1	VDFVIPK	VDFVIPK	2	VDFVIPK2	18965.5	14231.4	11677.4
Q02527	Q02527	MGAT3_RAT	Mgat3	Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase	1	VDFVLPEDTTEYFVR	VDFVLPEDTTEYFVR	2	VDFVLPEDTTEYFVR2	21725.9	8456.67	17418.6
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	VDGAKEYR	VDGAKEYR	2	VDGAKEYR2			9027.3
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	VDGALCLEK	VDGALC(UniMod:4)LEK	2	VDGALC(UniMod:4)LEK2	2.8451e+06	2.6159e+06	3.02935e+06
Q62733	Q62733	LAP2_RAT	Tmpo	Lamina-associated polypeptide 2, isoform beta	1	VDGAVISESTPIAETIK	VDGAVISESTPIAETIK	2	VDGAVISESTPIAETIK2	9016	8539.48	6007.38
Q99P74	Q99P74	RB27B_RAT	Rab27b	Ras-related protein Rab-27B	1	VDGEKPAEKK	VDGEKPAEKK	2	VDGEKPAEKK2	716.256		
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	VDGISISFQNLLAK	VDGISISFQNLLAK	2	VDGISISFQNLLAK2	38444.1	72093.8	45338.3
D3ZMQ3	D3ZMQ3	D3ZMQ3_RAT	Itga4	Integrin subunit alpha 4	1	VDGISSTYSQR	VDGISSTYSQR	2	VDGISSTYSQR2	6734.9	6028.95	9121.72
B0BNI6	B0BNI6	B0BNI6_RAT	Slc25a35	Solute carrier family 25, member 35	1	VDGLAALQK	VDGLAALQK	2	VDGLAALQK2	29820.9	23171.2	19967.5
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	VDGLMLK	VDGLMLK	2	VDGLMLK2	27457.6	34741.8	33613.8
Q0D2L6	Q0D2L6;B2RZ38	Q0D2L6_RAT	Rragc	Ras-related GTP-binding protein	0	VDGLSDDHK	VDGLSDDHK	2	VDGLSDDHK2	27015.5	16270.3	28266
F1M386	F1M386;A0A8I5YCN5	RPGF2_RAT	Rapgef2	Rap guanine nucleotide exchange factor 2	0	VDGLVNFEK	VDGLVNFEK	2	VDGLVNFEK2	10466.8	6758.7	5187.17
D4A5G8	D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	VDGMDILCVR	VDGMDILC(UniMod:4)VR	2	VDGMDILC(UniMod:4)VR2	113032	103802	106868
A0A8I5ZU41	A0A8I5ZU41	A0A8I5ZU41_RAT	Amy1	Alpha-amylase	1	VDGNCTGIK	VDGNC(UniMod:4)TGIK	2	VDGNC(UniMod:4)TGIK2	13072.9		11746.2
P11960	P11960	ODBA_RAT	Bckdha	2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment)	1	VDGNDVFAVYNATK	VDGNDVFAVYNATK	2	VDGNDVFAVYNATK2	7708.79	8935.53	5602.95
Q3T1K5	Q3T1K5	CAZA2_RAT	Capza2	F-actin-capping protein subunit alpha-2	1	VDGQQTIIACIESHQFQAK	VDGQQTIIAC(UniMod:4)IESHQFQAK	3	VDGQQTIIAC(UniMod:4)IESHQFQAK3	91681.3	90967.4	88250.1
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	VDGQSCLVPMMYQEGK	VDGQSC(UniMod:4)LVPMMYQEGK	2	VDGQSC(UniMod:4)LVPMMYQEGK2	648497	597130	626102
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	VDGQSCLVPMMYQEGK	VDGQSC(UniMod:4)LVPMMYQEGK	3	VDGQSC(UniMod:4)LVPMMYQEGK3	140397	120059	133658
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	VDGSDVALKDSDR	VDGSDVALKDSDR	3	VDGSDVALKDSDR3	19941.3	16663.2	12483
Q9WTS8	Q9WTS8	FCN1_RAT	Fcn1	Ficolin-1	1	VDGSINFYR	VDGSINFYR	2	VDGSINFYR2	36674.4	31889.2	41614.8
A0A8I6GD86	A0A8I6GD86	A0A8I6GD86_RAT	Tmem181	Transmembrane protein 181	1	VDGVSQDATTMYIHNK	VDGVSQDATTMYIHNK	3	VDGVSQDATTMYIHNK3	3786.11	5623.44	7080.95
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	VDGVVAALDSFQAR	VDGVVAALDSFQAR	2	VDGVVAALDSFQAR2	24850.7	36402.6	32758.5
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	VDGVVAALDSFQAR	VDGVVAALDSFQAR	3	VDGVVAALDSFQAR3	3622.76	4446.87	7055.28
Q6AXQ4	Q6AXQ4	MTM1_RAT	Mtm1	Myotubularin	1	VDGWAIYNPVEEYRR	VDGWAIYNPVEEYRR	3	VDGWAIYNPVEEYRR3	13861.4	19799.2	4907.94
Q63619	Q63619	COQ7_RAT	Coq7	5-demethoxyubiquinone hydroxylase, mitochondrial (Fragment)	1	VDHAGEYGANR	VDHAGEYGANR	3	VDHAGEYGANR3			24986.9
D4AA31	D4AA31	D4AA31_RAT	Prcp	Prolylcarboxypeptidase	1	VDHFGFSDTR	VDHFGFSDTR	2	VDHFGFSDTR2	11811.9	7522.35	11109.4
D4AA31	D4AA31	D4AA31_RAT	Prcp	Prolylcarboxypeptidase	1	VDHFGFSDTR	VDHFGFSDTR	3	VDHFGFSDTR3	24740.6	18904.9	16722.6
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	VDHTVGWPLDR	VDHTVGWPLDR	2	VDHTVGWPLDR2	2490.25	3700.04	2017.95
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	VDHTVGWPLDR	VDHTVGWPLDR	3	VDHTVGWPLDR3	40856.3	43314.2	36520.7
D3ZD73	D3ZD73;A0A8I5Y7L2	D3ZD73_RAT	Ddx6	DEAD-box helicase 6	0	VDHVQMIVLDEADK	VDHVQMIVLDEADK	3	VDHVQMIVLDEADK3	12271.4	7626.14	11410.2
A0A0G2JZA7	A0A0G2JZA7	A0A0G2JZA7_RAT	Cemip2	hyaluronoglucosaminidase	1	VDIADGVK	VDIADGVK	2	VDIADGVK2	2887.15		
P97615	P97615	THIOM_RAT	Txn2	Thioredoxin, mitochondrial	1	VDIDDHTDLAIEYEVSAVPTVLAIK	VDIDDHTDLAIEYEVSAVPTVLAIK	3	VDIDDHTDLAIEYEVSAVPTVLAIK3	8656.45	10611.5	8233.31
Q5M849	Q5M849	Q5M849_RAT	Ifi35	Interferon-induced protein 35	1	VDIEDCR	VDIEDC(UniMod:4)R	2	VDIEDC(UniMod:4)R2	52718.6	46542	52028.8
A0A8I5ZTN5	A0A8I5ZTN5	A0A8I5ZTN5_RAT	Adsl	Adenylosuccinate lyase	1	VDIEVLSVLASLGASVHK	VDIEVLSVLASLGASVHK	3	VDIEVLSVLASLGASVHK3	3896.58	3081.15	
Q4V8F9	Q4V8F9	HSDL2_RAT	Hsdl2	Hydroxysteroid dehydrogenase-like protein 2	1	VDIIADAAYSIFK	VDIIADAAYSIFK	2	VDIIADAAYSIFK2	8946.17	14657	15763.8
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	VDILDPALLR	VDILDPALLR	2	VDILDPALLR2	356728	340877	390773
D4ACF1	D4ACF1	D4ACF1_RAT	Eif4enif1	Eukaryotic translation initiation factor 4E nuclear import factor 1	1	VDILEMLQK	VDILEMLQK	2	VDILEMLQK2	5289.6	5281.99	2039.42
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VDINTEDLEDGTCR	VDINTEDLEDGTC(UniMod:4)R	2	VDINTEDLEDGTC(UniMod:4)R2	399144	371325	372499
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VDINTEDLEDGTCR	VDINTEDLEDGTC(UniMod:4)R	3	VDINTEDLEDGTC(UniMod:4)R3	52236.1	43036.3	52158.5
D3ZU48	D3ZU48	D3ZU48_RAT	Klhdc4	Kelch domain containing 4	1	VDIPGPPPR	VDIPGPPPR	2	VDIPGPPPR2	29345.1	29633.8	22291.1
Q05030	Q05030	PGFRB_RAT	Pdgfrb	Platelet-derived growth factor receptor beta	1	VDIPLHVPYDHQR	VDIPLHVPYDHQR	4	VDIPLHVPYDHQR4	32794.7	24656.5	24611.1
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	VDIQTEDLEDGTCK	VDIQTEDLEDGTC(UniMod:4)K	2	VDIQTEDLEDGTC(UniMod:4)K2	4299.91	3374.43	1963.03
F1M842	F1M842	F1M842_RAT	Tp53bp1	Tumor protein p53 binding protein 1	1	VDISCEPVEGVGK	VDISC(UniMod:4)EPVEGVGK	2	VDISC(UniMod:4)EPVEGVGK2	7323.64	4992.08	4142.32
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	VDISLEKPGTSPALEAYSETVK	VDISLEKPGTSPALEAYSETVK	3	VDISLEKPGTSPALEAYSETVK3	186762	197735	193641
Q9QWJ9	Q9QWJ9	NRP1_RAT	Nrp1	Neuropilin-1	1	VDISSNGEDWITLK	VDISSNGEDWITLK	2	VDISSNGEDWITLK2	2755.24		
A0A0G2K9M5	A0A0G2K9M5	A0A0G2K9M5_RAT	Tbc1d8b	TBC1 domain family member 8B	1	VDITDLIR	VDITDLIR	2	VDITDLIR2	9271.56	5887.04	13009.5
P04797	D3ZEN2;E9PTN6;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	VDIVAINDPFIDLNYMVYMFQYDSTHGK	VDIVAINDPFIDLNYMVYMFQYDSTHGK	4	VDIVAINDPFIDLNYMVYMFQYDSTHGK4		2503.11	
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	VDIWSLGITCIELAER	VDIWSLGITC(UniMod:4)IELAER	2	VDIWSLGITC(UniMod:4)IELAER2	7946.08	7274.85	
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	VDKDNEDFQESNR	VDKDNEDFQESNR	2	VDKDNEDFQESNR2	58615.6	44076.3	35662.7
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	VDKDNEDFQESNR	VDKDNEDFQESNR	3	VDKDNEDFQESNR3	2.26416e+06	1.587e+06	1.5311e+06
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	VDKDTATLSWGLPK	VDKDTATLSWGLPK	2	VDKDTATLSWGLPK2	1668.73		1928.7
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	VDKDTATLSWGLPK	VDKDTATLSWGLPK	3	VDKDTATLSWGLPK3	12741.2	21508.3	16520.1
P53610	P53610	PGTB1_RAT	Pggt1b	Geranylgeranyl transferase type-1 subunit beta	1	VDKEACLAGLR	VDKEAC(UniMod:4)LAGLR	3	VDKEAC(UniMod:4)LAGLR3	22188.4	14008.7	21962.6
P05065	P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	1	VDKGVVPLAGTNGETTTQGLDGLSER	VDKGVVPLAGTNGETTTQGLDGLSER	3	VDKGVVPLAGTNGETTTQGLDGLSER3	24963.5	49692.8	42290.1
P57756	P57756	FCN2_RAT	Fcn2	Ficolin-2	1	VDLADFDGNHDFAK	VDLADFDGNHDFAK	3	VDLADFDGNHDFAK3	3344.43	5779.68	6713.02
Q9R080	Q9R080	GPSM1_RAT	Gpsm1	G-protein-signaling modulator 1	1	VDLAGSPDQEASGLPDPR	VDLAGSPDQEASGLPDPR	2	VDLAGSPDQEASGLPDPR2	12457	18652.6	14070
Q9R080	Q9R080	GPSM1_RAT	Gpsm1	G-protein-signaling modulator 1	1	VDLAGSPDQEASGLPDPR	VDLAGSPDQEASGLPDPR	3	VDLAGSPDQEASGLPDPR3	8342.38	8512.96	6818.69
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	VDLAVLAAVEIR	VDLAVLAAVEIR	2	VDLAVLAAVEIR2	48014.3	42845.3	44317
P10252	P10252	CD48_RAT	Cd48	CD48 antigen	1	VDLDKTNGALR	VDLDKTNGALR	2	VDLDKTNGALR2	2058.87	7022.9	4823.49
P10252	P10252	CD48_RAT	Cd48	CD48 antigen	1	VDLDKTNGALR	VDLDKTNGALR	3	VDLDKTNGALR3	109606	99524.1	138859
A0A0G2K089	A0A0G2K089	A0A0G2K089_RAT	Dennd4c	DENN domain containing 4C	1	VDLDSAEDTK	VDLDSAEDTK	2	VDLDSAEDTK2	12415	7925.88	8364.33
G3V6A9	G3V6A9	G3V6A9_RAT	Mfap4	Microfibril-associated glycoprotein 4-like	1	VDLEDFENNTAYAK	VDLEDFENNTAYAK	2	VDLEDFENNTAYAK2	3488.54	4273.68	2637.26
P61227	P61227	RAP2B_RAT	Rap2b	Ras-related protein Rap-2b	1	VDLEGEREVSYGEGK	VDLEGEREVSYGEGK	2	VDLEGEREVSYGEGK2	19473.4	28363.7	23962.7
P61227	P61227	RAP2B_RAT	Rap2b	Ras-related protein Rap-2b	1	VDLEGEREVSYGEGK	VDLEGEREVSYGEGK	3	VDLEGEREVSYGEGK3	428631	349200	435241
D3ZK56	D3ZK56	D3ZK56_RAT	Rap2c	Ras-related protein Rap-2	1	VDLEPER	VDLEPER	2	VDLEPER2	18159.3	18911.5	25856.3
D3ZK56	D3ZK56	D3ZK56_RAT	Rap2c	Ras-related protein Rap-2	1	VDLEPEREVMSSEGR	VDLEPEREVMSSEGR	3	VDLEPEREVMSSEGR3	53294.6	54659.9	67755.5
A0A0G2K5W1	A0A0G2K5W1	A0A0G2K5W1_RAT	Nckap5l	NCK-associated protein 5-like	1	VDLEPISPR	VDLEPISPR	2	VDLEPISPR2	6501.36	5959.13	4024.81
A0A0G2JTW1	A0A0G2JTW1	A0A0G2JTW1_RAT	Rap2a	Ras-related protein Rap-2	1	VDLESER	VDLESER	2	VDLESER2	47312.9	30484.5	57486.8
A0A0G2JTW1	A0A0G2JTW1	A0A0G2JTW1_RAT	Rap2a	Ras-related protein Rap-2	1	VDLESEREVSSNEGR	VDLESEREVSSNEGR	3	VDLESEREVSSNEGR3	34152.5	25252	27707.2
A0A0G2K543	A0A0G2K543	A0A0G2K543_RAT	C2cd5	C2 calcium-dependent domain containing 5	1	VDLFNDLNR	VDLFNDLNR	2	VDLFNDLNR2	10392	7033.3	5361.94
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	VDLFPTDIGLHK	VDLFPTDIGLHK	3	VDLFPTDIGLHK3	10227.4	8765.21	5825.47
F1M7P8	F1M7P8	F1M7P8_RAT	Spryd3	SPRY domain containing 3	1	VDLHPLSG	VDLHPLSG	2	VDLHPLSG2	17521.8	9541.16	8220.3
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	VDLICDAMR	VDLIC(UniMod:4)DAMR	2	VDLIC(UniMod:4)DAMR2	18600.3	24713.8	13103.6
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	VDLIYQNTTAMTIYENLEPVSMFGK	VDLIYQNTTAMTIYENLEPVSMFGK	3	VDLIYQNTTAMTIYENLEPVSMFGK3	14276.7	13487.6	14979
D4ACF1	D4ACF1	D4ACF1_RAT	Eif4enif1	Eukaryotic translation initiation factor 4E nuclear import factor 1	1	VDLKPLLSSLSANK	VDLKPLLSSLSANK	3	VDLKPLLSSLSANK3	3234.13	4464.83	
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	VDLLAPMILHGIETQGAR	VDLLAPMILHGIETQGAR	2	VDLLAPMILHGIETQGAR2	21427.8	45175.7	36267.9
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	VDLLAPMILHGIETQGAR	VDLLAPMILHGIETQGAR	3	VDLLAPMILHGIETQGAR3	782786	736732	579466
Q68FU3	Q68FU3	ETFB_RAT	Etfb	Electron transfer flavoprotein subunit beta	1	VDLLFLGK	VDLLFLGK	2	VDLLFLGK2	152741	128460	150844
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	VDLLIGGSQDDGLINR	VDLLIGGSQDDGLINR	2	VDLLIGGSQDDGLINR2	30942	42299.3	34619.8
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	VDLPATSVVITFHNEAR	VDLPATSVVITFHNEAR	2	VDLPATSVVITFHNEAR2	7943.36		10833.1
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	VDLPATSVVITFHNEAR	VDLPATSVVITFHNEAR	3	VDLPATSVVITFHNEAR3	145975	141115	136121
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VDLPATVLTSVSVK	VDLPATVLTSVSVK	2	VDLPATVLTSVSVK2	1.25372e+06	1.21197e+06	1.18542e+06
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VDLPATVLTSVSVK	VDLPATVLTSVSVK	3	VDLPATVLTSVSVK3	257030	250284	235576
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VDLPATVLTSVSVKK	VDLPATVLTSVSVKK	3	VDLPATVLTSVSVKK3	11584.2	23817.1	19182.8
A0A8I5ZYB9	A0A8I5ZYB9	A0A8I5ZYB9_RAT	Lrrc32	Leucine rich repeat containing 32	1	VDLPCFR	VDLPC(UniMod:4)FR	2	VDLPC(UniMod:4)FR2	179816	147823	176573
M0R4P9	M0R4P9	M0R4P9_RAT	Ube2h	Ubiquitin-conjugating enzyme E2H	1	VDLPDKYPFK	VDLPDKYPFK	2	VDLPDKYPFK2	20280.3	18321.2	20298.2
M0R4P9	M0R4P9	M0R4P9_RAT	Ube2h	Ubiquitin-conjugating enzyme E2H	1	VDLPDKYPFK	VDLPDKYPFK	3	VDLPDKYPFK3	193389	183238	181972
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	VDLPEDFQMNYDLWLER	VDLPEDFQMNYDLWLER	3	VDLPEDFQMNYDLWLER3		4272.86	
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	VDLQDHGESAYAVYDR	VDLQDHGESAYAVYDR	2	VDLQDHGESAYAVYDR2	18429	21673.5	19999.5
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	VDLQDHGESAYAVYDR	VDLQDHGESAYAVYDR	3	VDLQDHGESAYAVYDR3	535323	701758	639732
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	VDLQHFCGYVTMLNASSQLASR	VDLQHFC(UniMod:4)GYVTMLNASSQLASR	3	VDLQHFC(UniMod:4)GYVTMLNASSQLASR3	25665.7	25187.2	22847.8
Q8K3E7	Q8K3E7	DPY30_RAT	Dpy30	Protein dpy-30 homolog	1	VDLQSLPTR	VDLQSLPTR	2	VDLQSLPTR2	20670.5	23897.4	19668.4
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	VDLSIAR	VDLSIAR	1	VDLSIAR1	726498	602260	461083
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	VDLSIAR	VDLSIAR	2	VDLSIAR2	77705.9	62585.5	66421.1
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	VDLSNQLEEERR	VDLSNQLEEERR	3	VDLSNQLEEERR3	60335.1	60188.9	49320.1
P57113	P57113	MAAI_RAT	Gstz1	Maleylacetoacetate isomerase	1	VDLSPYPTISHINK	VDLSPYPTISHINK	3	VDLSPYPTISHINK3	24005.4	11734.7	18380
P24329	P24329	THTR_RAT	Tst	Thiosulfate sulfurtransferase	1	VDLSQPLIATCR	VDLSQPLIATC(UniMod:4)R	2	VDLSQPLIATC(UniMod:4)R2	42381.2	37952	51266.1
Q6MG06	Q6MG06	GNL1_RAT	Gnl1	Guanine nucleotide-binding protein-like 1	1	VDLSSWR	VDLSSWR	2	VDLSSWR2	37317.6	42349.8	44703.8
A0A8I6A356	A0A8I6A356	A0A8I6A356_RAT	Ube2k	E2 ubiquitin-conjugating enzyme	1	VDLVDENFTELR	VDLVDENFTELR	2	VDLVDENFTELR2	3267.84	3240.72	5967.31
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	VDLVFRPNSGLPATR	VDLVFRPNSGLPATR	3	VDLVFRPNSGLPATR3	42521.4	42237.3	46942.8
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	VDLVLMHWR	VDLVLMHWR	2	VDLVLMHWR2	4739.85	7999.99	9783.46
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	VDLVLMHWR	VDLVLMHWR	3	VDLVLMHWR3	12339.3	24615.3	14177.8
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	VDLWNASNLK	VDLWNASNLK	2	VDLWNASNLK2	525027	549391	499211
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	VDMASNPAK	VDMASNPAK	2	VDMASNPAK2	230899	240669	226841
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	VDMLSEINIAPR	VDMLSEINIAPR	2	VDMLSEINIAPR2	9024.06	12030.2	4753.37
Q3B7U9	Q3B7U9	FKBP8_RAT	Fkbp8	Peptidyl-prolyl cis-trans isomerase FKBP8	1	VDMTCEEEEELLQLK	VDMTC(UniMod:4)EEEEELLQLK	2	VDMTC(UniMod:4)EEEEELLQLK2	10446.7	9308.79	9263.91
Q3B7U9	Q3B7U9	FKBP8_RAT	Fkbp8	Peptidyl-prolyl cis-trans isomerase FKBP8	1	VDMTCEEEEELLQLK	VDMTC(UniMod:4)EEEEELLQLK	3	VDMTC(UniMod:4)EEEEELLQLK3	8140.89	8078.06	10332.4
D3ZXJ5	D3ZXJ5	D3ZXJ5_RAT	Efl1	Elongation factor like GTPase 1	1	VDMVNEEIGR	VDMVNEEIGR	2	VDMVNEEIGR2	8870.8	8816.61	4058.64
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	VDNAYWLWTFQGR	VDNAYWLWTFQGR	2	VDNAYWLWTFQGR2	18099.6	29641.1	29696.7
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	VDNAYWLWTFQGR	VDNAYWLWTFQGR	3	VDNAYWLWTFQGR3	2399.25	3611.18	7834.2
P13084	D3ZXI2;D3ZP59;P13084	NPM_RAT	Npm1	Nucleophosmin	0	VDNDENEHQLSLR	VDNDENEHQLSLR	3	VDNDENEHQLSLR3	60633	16538.8	13340.7
D4A234	D4A234	D4A234_RAT	Uri1	URI1, prefoldin-like chaperone	1	VDNDYSALQER	VDNDYSALQER	2	VDNDYSALQER2	1348.11	1784.2	5742.63
O35314	O35314	SCG1_RAT	Chgb	Secretogranin-1	1	VDNEEWTGGGGHSR	VDNEEWTGGGGHSR	2	VDNEEWTGGGGHSR2		2114.12	1413.43
O35314	O35314	SCG1_RAT	Chgb	Secretogranin-1	1	VDNEEWTGGGGHSR	VDNEEWTGGGGHSR	3	VDNEEWTGGGGHSR3	6426.08	4604.31	3188.44
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VDNEFDQR	VDNEFDQR	2	VDNEFDQR2	204551	241074	236800
A0A8I5Y6A1	A0A8I5Y6A1	A0A8I5Y6A1_RAT	Ablim1	Actin-binding LIM protein 1	1	VDNEILDYK	VDNEILDYK	2	VDNEILDYK2	7106.58	8984.95	9286.05
Q9R0I8	O88377;Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	0	VDNHLFNK	VDNHLFNK	2	VDNHLFNK2	28649.7	23943	30598.2
O88377	O88377	PI42B_RAT	Pip4k2b	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta	1	VDNHLFNKENLPSR	VDNHLFNKENLPSR	4	VDNHLFNKENLPSR4	12791.3	15761.5	21781
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	VDNHLFNKENMPSHFK	VDNHLFNKENMPSHFK	3	VDNHLFNKENMPSHFK3	3007.26		6203.37
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	VDNHLFNKENMPSHFK	VDNHLFNKENMPSHFK	4	VDNHLFNKENMPSHFK4	24480.1	16919.3	22040.5
Q6PDU1	Q6PDU1	SRSF2_RAT	Srsf2	Serine/arginine-rich splicing factor 2	1	VDNLTYR	VDNLTYR	2	VDNLTYR2	16206.2	23582	19144.7
P70582	P70582	NUP54_RAT	Nup54	Nuclear pore complex protein Nup54	1	VDNPDSEK	VDNPDSEK	2	VDNPDSEK2			1522.98
P01015	P01015	ANGT_RAT	Agt	Angiotensinogen	1	VDNPQNVV	VDNPQNVV	1	VDNPQNVV1	49390.1	50012.6	43231.2
P01015	P01015	ANGT_RAT	Agt	Angiotensinogen	1	VDNPQNVV	VDNPQNVV	2	VDNPQNVV2	94624.3	76776.3	100417
P06685	P09626;P06687;P06685;P06686	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	0	VDNSSLTGESEPQTR	VDNSSLTGESEPQTR	2	VDNSSLTGESEPQTR2	108981	135216	132181
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	VDNVNSIIER	VDNVNSIIER	2	VDNVNSIIER2	69155.7	90381.9	66159.5
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	VDNVSLAAGDLR	VDNVSLAAGDLR	2	VDNVSLAAGDLR2	7100.72	7240.52	10333.6
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	VDPALPQEAIPLQK	VDPALPQEAIPLQK	2	VDPALPQEAIPLQK2	3.50168e+06	2.96738e+06	2.85583e+06
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	VDPALPQEAIPLQK	VDPALPQEAIPLQK	3	VDPALPQEAIPLQK3	196553	170935	161445
F7FHP0	F7FHP0	F7FHP0_RAT	Angptl3	Angiopoietin-like 3	1	VDPDLSPFDSVPSEPK	VDPDLSPFDSVPSEPK	2	VDPDLSPFDSVPSEPK2	36624.4	23798.5	22130.8
Q6IG02	Q6IG02	K22E_RAT	Krt2	Keratin, type II cytoskeletal 2 epidermal	1	VDPEIQNVK	VDPEIQNVK	2	VDPEIQNVK2	5.33384e+06	4.35027e+06	4.1238e+06
A2VD12	A2VD12	PBIP1_RAT	Pbxip1	Pre-B-cell leukemia transcription factor-interacting protein 1	1	VDPESEEAPQALQDSSK	VDPESEEAPQALQDSSK	2	VDPESEEAPQALQDSSK2	4774.81	2545.92	
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	VDPGDNVR	VDPGDNVR	2	VDPGDNVR2		76454.1	
D4A529	D4A529	D4A529_RAT	She	Src homology 2 domain containing E	1	VDPGLALEK	VDPGLALEK	2	VDPGLALEK2	172137	166915	117303
D3ZYB4	D3ZYB4	D3ZYB4_RAT	Lpin2	phosphatidate phosphatase	1	VDPISMETLSHCGTASYK	VDPISMETLSHC(UniMod:4)GTASYK	3	VDPISMETLSHC(UniMod:4)GTASYK3	8026.22	16157.8	13639.7
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	VDPLETEIGVK	VDPLETEIGVK	2	VDPLETEIGVK2	49452.7	54840	44765
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	VDPLVSLMMVEK	VDPLVSLMMVEK	2	VDPLVSLMMVEK2	113159	104867	104040
P50282	P50282	MMP9_RAT	Mmp9	Matrix metalloproteinase-9	1	VDPQSVTR	VDPQSVTR	2	VDPQSVTR2	52552.8	57868.6	44778.4
P32198	P32198	CPT1A_RAT	Cpt1a	Carnitine O-palmitoyltransferase 1, liver isoform	1	VDPSLGMIAK	VDPSLGMIAK	2	VDPSLGMIAK2	58189.5	61799.4	50662.9
Q498C8	Q498C8	RER1_RAT	Rer1	Protein RER1	1	VDPSLMEDSDDGPSLPTK	VDPSLMEDSDDGPSLPTK	2	VDPSLMEDSDDGPSLPTK2	90371.4	98321.6	75110.9
Q498C8	Q498C8	RER1_RAT	Rer1	Protein RER1	1	VDPSLMEDSDDGPSLPTK	VDPSLMEDSDDGPSLPTK	3	VDPSLMEDSDDGPSLPTK3	5826.05	6724.86	9957.09
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	VDPSRPMTPQQR	VDPSRPMTPQQR	3	VDPSRPMTPQQR3	215348	215574	228283
A0A096MK24	A0A096MK24	A0A096MK24_RAT	Morc4	Microrchidia 4	1	VDPSTLPAR	VDPSTLPAR	2	VDPSTLPAR2	9047.83	13979.8	9035.68
O35094	O35094	TIM44_RAT	Timm44	Mitochondrial import inner membrane translocase subunit TIM44	1	VDPTFDKDR	VDPTFDKDR	2	VDPTFDKDR2	16382.1	15803.2	11011.9
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	VDPVDGVVLVDPDYLK	VDPVDGVVLVDPDYLK	2	VDPVDGVVLVDPDYLK2	44968	45601	60961.6
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	VDPVDGVVLVDPDYLK	VDPVDGVVLVDPDYLK	3	VDPVDGVVLVDPDYLK3	7182.87	9072.83	7247.17
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	VDPVGPLSFSGGVSELAR	VDPVGPLSFSGGVSELAR	2	VDPVGPLSFSGGVSELAR2	18240.5	16760.6	14621.5
P01946	G3V8R3;P01946	HBA_RAT	Hba1	Hemoglobin subunit alpha-1/2	0	VDPVNFK	VDPVNFK	1	VDPVNFK1	28997.4	18922.5	16510.7
P01946	G3V8R3;P01946	HBA_RAT	Hba1	Hemoglobin subunit alpha-1/2	0	VDPVNFK	VDPVNFK	2	VDPVNFK2	1.53527e+06	1.49407e+06	1.52252e+06
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	VDPWESEQAQWMETVK	VDPWESEQAQWMETVK	3	VDPWESEQAQWMETVK3	26407.1	18056.6	25470
B2GV55	B2GV55	B2GV55_RAT	Ube2q1	Ubiquitin conjugating enzyme E2 Q1	1	VDQDSALHNDLQILK	VDQDSALHNDLQILK	2	VDQDSALHNDLQILK2			1538.75
B2GV55	B2GV55	B2GV55_RAT	Ube2q1	Ubiquitin conjugating enzyme E2 Q1	1	VDQDSALHNDLQILK	VDQDSALHNDLQILK	3	VDQDSALHNDLQILK3	39666.5	29898	40534.2
D4A0T0	D4A0T0	D4A0T0_RAT	Ndufb10	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10	1	VDQEIINIIQER	VDQEIINIIQER	2	VDQEIINIIQER2	71408	94395.6	108303
D4A0T0	D4A0T0	D4A0T0_RAT	Ndufb10	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10	1	VDQEIINIIQER	VDQEIINIIQER	3	VDQEIINIIQER3	23396.3	28555.4	28500.8
Q68FQ9	Q68FQ9	Q68FQ9_RAT	Lancl2	LanC lantibiotic synthetase component C-like 2 (Bacterial)	1	VDQETLTEMVKPSIDYVR	VDQETLTEMVKPSIDYVR	3	VDQETLTEMVKPSIDYVR3	11581.5	19502.2	25263.8
Q3ZU82	Q3ZU82	GOGA5_RAT	Golga5	Golgin subfamily A member 5	1	VDQGAATALR	VDQGAATALR	2	VDQGAATALR2	6938.66	6779.75	4313.78
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	VDQIIMAK	VDQIIMAK	1	VDQIIMAK1	1542.6	2062.91	
D4ACB8	D4ACB8	D4ACB8_RAT	Cct8	T-complex protein 1 subunit theta	1	VDQIIMAK	VDQIIMAK	2	VDQIIMAK2	218173	215668	230575
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	VDQIQEIVTGNPTVIK	VDQIQEIVTGNPTVIK	2	VDQIQEIVTGNPTVIK2	56467.1	45960.3	48335.1
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	VDQIQEIVTGNPTVIK	VDQIQEIVTGNPTVIK	3	VDQIQEIVTGNPTVIK3	33538.9	36921.2	21700
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	VDQLAAQLADLAAR	VDQLAAQLADLAAR	2	VDQLAAQLADLAAR2	419207	299256	310616
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	VDQLAAQLADLAAR	VDQLAAQLADLAAR	3	VDQLAAQLADLAAR3	135515	110363	124781
Q5FVL8	Q5FVL8	Q5FVL8_RAT	Abcb10	ATP binding cassette subfamily B member 10	1	VDQLLQLAR	VDQLLQLAR	2	VDQLLQLAR2	10261.1	7090.36	13462.9
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	VDQLNLER	VDQLNLER	2	VDQLNLER2	7844.97	7914.79	8374
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	VDQPPEAK	VDQPPEAK	1	VDQPPEAK1		6308.63	2273.77
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	VDQPPEAK	VDQPPEAK	2	VDQPPEAK2	39375.8		58140.4
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	VDQSAVGFEYQGK	VDQSAVGFEYQGK	2	VDQSAVGFEYQGK2	183043	181970	188032
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	VDQSAVGFEYQGK	VDQSAVGFEYQGK	3	VDQSAVGFEYQGK3	18091.8	19201.4	14036.7
P11507	Q64578;P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	0	VDQSILTGESVSVIK	VDQSILTGESVSVIK	2	VDQSILTGESVSVIK2	445687	472184	486297
P11507	Q64578;P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	0	VDQSILTGESVSVIK	VDQSILTGESVSVIK	3	VDQSILTGESVSVIK3	17596	18014.4	22613
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	VDQSILTGESVSVTK	VDQSILTGESVSVTK	2	VDQSILTGESVSVTK2	1.02522e+06	1.06647e+06	1.11497e+06
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	VDQSILTGESVSVTK	VDQSILTGESVSVTK	3	VDQSILTGESVSVTK3	105093	128132	124006
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	VDQSLHTNATLDAASEYAK	VDQSLHTNATLDAASEYAK	3	VDQSLHTNATLDAASEYAK3	14910.7	8283.32	8734.52
A0A8I6AZI9	A0A8I6AZI9	A0A8I6AZI9_RAT	Ubash3a	Ubiquitin associated and SH3 domain containing, A	1	VDQVFGK	VDQVFGK	2	VDQVFGK2	6227.83	5524.33	7333.1
P24155	P24155	THOP1_RAT	Thop1	Thimet oligopeptidase	1	VDQVLHTQTDVDPAEEYAR	VDQVLHTQTDVDPAEEYAR	3	VDQVLHTQTDVDPAEEYAR3	5934.96	9910.98	9391.03
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	VDQVQDIVTGNPTVIK	VDQVQDIVTGNPTVIK	2	VDQVQDIVTGNPTVIK2	59798.6	69804.3	68892.2
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	VDQVQDIVTGNPTVIK	VDQVQDIVTGNPTVIK	3	VDQVQDIVTGNPTVIK3	34667.5	29605.5	42123.1
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	VDREALALCTDRDLQEMGIPLGPR	VDREALALC(UniMod:4)TDRDLQEMGIPLGPR	4	VDREALALC(UniMod:4)TDRDLQEMGIPLGPR4	7527.41	13046.6	22403.5
P61983	P61983	1433G_RAT	Ywhag	14-3-3 protein gamma	1	VDREQLVQK	VDREQLVQK	2	VDREQLVQK2	6322.72	3491.28	
P97689	P97689	UT1_RAT	Slc14a1	Urea transporter 1	1	VDRGESQILSCR	VDRGESQILSC(UniMod:4)R	3	VDRGESQILSC(UniMod:4)R3	319385	320502	381475
Q9JLZ1	Q9JLZ1	GLRX3_RAT	Glrx3	Glutaredoxin-3	1	VDRLDGAHAPELTK	VDRLDGAHAPELTK	3	VDRLDGAHAPELTK3	15784.2	18315.6	15687.6
Q9JLZ1	Q9JLZ1	GLRX3_RAT	Glrx3	Glutaredoxin-3	1	VDRLDGAHAPELTK	VDRLDGAHAPELTK	4	VDRLDGAHAPELTK4	61230.7		
Q9JLZ1	Q9JLZ1	GLRX3_RAT	Glrx3	Glutaredoxin-3	1	VDRLDGAHAPELTKK	VDRLDGAHAPELTKK	4	VDRLDGAHAPELTKK4	4764.91	2852.59	4896.71
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	VDRPSLTQTAPSFSSVLK	VDRPSLTQTAPSFSSVLK	3	VDRPSLTQTAPSFSSVLK3	31701.4	39477	36183.8
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	VDSADGLHVVLYDCSVGHGDCSR	VDSADGLHVVLYDC(UniMod:4)SVGHGDC(UniMod:4)SR	4	VDSADGLHVVLYDC(UniMod:4)SVGHGDC(UniMod:4)SR4		4185.75	
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	VDSAVFCLCLDDFPMK	VDSAVFC(UniMod:4)LC(UniMod:4)LDDFPMK	2	VDSAVFC(UniMod:4)LC(UniMod:4)LDDFPMK2	8373.02	12429.8	4936.58
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	VDSCASMYSR	VDSC(UniMod:4)ASMYSR	2	VDSC(UniMod:4)ASMYSR2	56957.5	55705.9	61044.4
E9PU10	E9PU10	E9PU10_RAT	Ifi47	Interferon gamma inducible protein 47	1	VDSDLYSEER	VDSDLYSEER	2	VDSDLYSEER2	148285	166429	128436
A0A8I6AE35	A0A8I6AE35	A0A8I6AE35_RAT	Ube2q2	Ubiquitin conjugating enzyme E2 Q2	1	VDSDSPLHSDLQILK	VDSDSPLHSDLQILK	3	VDSDSPLHSDLQILK3	17580.8	19486.6	16709.7
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	VDSDTLCTEEIFPNEGAGTDLR	VDSDTLC(UniMod:4)TEEIFPNEGAGTDLR	3	VDSDTLC(UniMod:4)TEEIFPNEGAGTDLR3	49642.3	40884.2	48183.8
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	VDSEILSAK	VDSEILSAK	2	VDSEILSAK2	47037.1	47024.8	48400.1
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	VDSFNSLYMLVK	VDSFNSLYMLVK	2	VDSFNSLYMLVK2	6791.87	3562.16	11047
Q80Z30	Q80Z30	PPM1E_RAT	Ppm1e	Protein phosphatase 1E	1	VDSFTDR	VDSFTDR	2	VDSFTDR2	105053	97804.4	93939.7
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	VDSGCPSGPDR	VDSGC(UniMod:4)PSGPDR	2	VDSGC(UniMod:4)PSGPDR2	10645.7		5223.31
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	VDSIDDR	VDSIDDR	2	VDSIDDR2	409191	505064	467377
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	VDSIDDRHR	VDSIDDRHR	2	VDSIDDRHR2			2500.12
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	VDSILLTHIGDDNLPGINSMLQR	VDSILLTHIGDDNLPGINSMLQR	3	VDSILLTHIGDDNLPGINSMLQR3	12090.8	10852.7	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	VDSLIPWIR	VDSLIPWIR	2	VDSLIPWIR2	78768	73351.8	84813.4
G3V9R8	G3V9R8	HNRPC_RAT	Hnrnpc	Heterogeneous nuclear ribonucleoprotein C	1	VDSLLESLEK	VDSLLESLEK	2	VDSLLESLEK2	10997.4	15895.9	16012.9
D3ZN06	D3ZN06	D3ZN06_RAT	Cd248	CD248 molecule	1	VDSLVGVGPANGLLWIGLQR	VDSLVGVGPANGLLWIGLQR	3	VDSLVGVGPANGLLWIGLQR3	98549.5	113308	99728.5
Q5XI83	Q5XI83	VP35L_RAT	Vps35l	VPS35 endosomal protein-sorting factor-like	1	VDSNDSLYGGDSR	VDSNDSLYGGDSR	2	VDSNDSLYGGDSR2	10868.7	6170.28	9321.54
A0A8I5Y868	A0A8I5Y868	A0A8I5Y868_RAT	Klc2	Kinesin light chain	1	VDSPTVNTTLR	VDSPTVNTTLR	2	VDSPTVNTTLR2	10818.6	9929.89	9219.81
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	VDSPTVTTTLK	VDSPTVTTTLK	2	VDSPTVTTTLK2	84594.2	100132	139962
Q5BJ92	Q5BJ92	PP4C_RAT	Ppp4c	Serine/threonine-protein phosphatase 4 catalytic subunit	1	VDSPVTVCGDIHGQFYDLK	VDSPVTVC(UniMod:4)GDIHGQFYDLK	3	VDSPVTVC(UniMod:4)GDIHGQFYDLK3	20254.9	13023.2	26641.7
Q498S0	Q498S0	Q498S0_RAT	Chst12	Carbohydrate sulfotransferase	1	VDSQLHFPPSYR	VDSQLHFPPSYR	3	VDSQLHFPPSYR3	3859.7	1940.47	3249.86
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	VDSSNYDPFR	VDSSNYDPFR	2	VDSSNYDPFR2	33690.1	29248.7	37928.3
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	VDSSSIFCSDCPSLEGSVPHLR	VDSSSIFC(UniMod:4)SDC(UniMod:4)PSLEGSVPHLR	3	VDSSSIFC(UniMod:4)SDC(UniMod:4)PSLEGSVPHLR3	9738.6	8895.5	9653.96
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	VDSSSIFCSDCPSLEGSVPHLRPASGDR	VDSSSIFC(UniMod:4)SDC(UniMod:4)PSLEGSVPHLRPASGDR	4	VDSSSIFC(UniMod:4)SDC(UniMod:4)PSLEGSVPHLRPASGDR4	176852	248069	217466
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	VDSTGYFPDQHVNFR	VDSTGYFPDQHVNFR	3	VDSTGYFPDQHVNFR3	7800.69	6309.59	
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	VDSVNPPYPR	VDSVNPPYPR	2	VDSVNPPYPR2	1.65865e+07	1.65499e+07	2.01579e+07
Q7TQ11	Q7TQ11	Q7TQ11_RAT	Vtn	Aa1018	1	VDSVNPPYPR	VDSVNPPYPR	3	VDSVNPPYPR3	335850	355744	456341
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	VDSYGGFLR	VDSYGGFLR	2	VDSYGGFLR2	168805	188883	181432
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	VDTGTAEGFR	VDTGTAEGFR	2	VDTGTAEGFR2	13134.8	12952	9601.9
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	VDTGTAEGFRDTAESR	VDTGTAEGFRDTAESR	3	VDTGTAEGFRDTAESR3	3946.56	11869.3	12647.1
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	VDTILNR	VDTILNR	2	VDTILNR2	15205.1	12828.5	11045.6
A0A8I6AAW1	A0A8I6AAW1	A0A8I6AAW1_RAT	Tars3	threonine--tRNA ligase	1	VDTPTTTVYR	VDTPTTTVYR	2	VDTPTTTVYR2		3792.06	3728.13
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	VDTQDQGMYR	VDTQDQGMYR	2	VDTQDQGMYR2	29619.2	34681.3	32313.4
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	VDTVNHMADDLINSGHSDAATIAEWK	VDTVNHMADDLINSGHSDAATIAEWK	3	VDTVNHMADDLINSGHSDAATIAEWK3	41153.7	46522.4	42498.7
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	VDTVNHMADDLINSGHSDAATIAEWK	VDTVNHMADDLINSGHSDAATIAEWK	4	VDTVNHMADDLINSGHSDAATIAEWK4	299113	311918	314193
P41123	A0A0G2JYG9;A0A8I5ZNK4;P41123	RL13_RAT	Rpl13	Large ribosomal subunit protein eL13	0	VDTWFNQPAR	VDTWFNQPAR	2	VDTWFNQPAR2	22782.8	21530.4	20142.2
Q6AYB5	Q6AYB5	SRP54_RAT	Srp54	Signal recognition particle subunit SRP54	1	VDVASVIVTK	VDVASVIVTK	2	VDVASVIVTK2	11953.2	7002.24	15733.2
A0A8I5ZYB9	A0A8I5ZYB9	A0A8I5ZYB9_RAT	Lrrc32	Leucine rich repeat containing 32	1	VDVDATQDLICR	VDVDATQDLIC(UniMod:4)R	2	VDVDATQDLIC(UniMod:4)R2	193962	200714	210895
Q4KLF8	Q4KLF8;A0A8I6G2W5	ARPC5_RAT	Arpc5	Actin-related protein 2/3 complex subunit 5	0	VDVDEYDENK	VDVDEYDENK	2	VDVDEYDENK2	553460	497324	598788
A0A8I6AW91	A0A8I6AW91	A0A8I6AW91_RAT	Srp72	Signal recognition particle subunit SRP72	1	VDVEALENSPGATYIR	VDVEALENSPGATYIR	2	VDVEALENSPGATYIR2	4701.29	2942.36	3190.67
A0A8I6AW91	A0A8I6AW91	A0A8I6AW91_RAT	Srp72	Signal recognition particle subunit SRP72	1	VDVEALENSPGATYIR	VDVEALENSPGATYIR	3	VDVEALENSPGATYIR3	12941.4		4817.14
Q63797	Q63797	PSME1_RAT	Psme1	Proteasome activator complex subunit 1	1	VDVFREDLCSK	VDVFREDLC(UniMod:4)SK	3	VDVFREDLC(UniMod:4)SK3	167723	154011	177091
P01041	P01041	CYTB_RAT	Cstb	Cystatin-B	1	VDVGEEK	VDVGEEK	2	VDVGEEK2		30621.6	
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	VDVGHQPLR	VDVGHQPLR	2	VDVGHQPLR2	7477.2	7921.49	5467.87
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VDVGKDQEFTVK	VDVGKDQEFTVK	2	VDVGKDQEFTVK2	54022.6	52373.8	42340.9
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VDVGKDQEFTVK	VDVGKDQEFTVK	3	VDVGKDQEFTVK3	5.55232e+06	5.8999e+06	5.85601e+06
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	VDVIFCDK	VDVIFC(UniMod:4)DK	2	VDVIFC(UniMod:4)DK2	17692.6	34271.5	25559.1
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	VDVINFAQNK	VDVINFAQNK	2	VDVINFAQNK2	35622.4	31751.2	38823.2
G3V912	G3V912	G3V912_RAT	Tmx4	Thioredoxin-related transmembrane protein 4	1	VDVIQEPGLSGR	VDVIQEPGLSGR	2	VDVIQEPGLSGR2	68130.9	58362	61382.9
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	VDVLPVNLPGEHGQR	VDVLPVNLPGEHGQR	2	VDVLPVNLPGEHGQR2	1.51455e+07	1.6447e+07	1.4966e+07
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	VDVLPVNLPGEHGQR	VDVLPVNLPGEHGQR	3	VDVLPVNLPGEHGQR3	7.09798e+07	8.59279e+07	8.14132e+07
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	VDVLPVNLPGEHGQR	VDVLPVNLPGEHGQR	4	VDVLPVNLPGEHGQR4	62076.6	72064.4	59973.6
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	VDVLPVNLPGEHGQRLPVNR	VDVLPVNLPGEHGQRLPVNR	3	VDVLPVNLPGEHGQRLPVNR3	11186.2	15291.7	19651.1
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	VDVLPVNLPGEHGQRLPVNR	VDVLPVNLPGEHGQRLPVNR	4	VDVLPVNLPGEHGQRLPVNR4	38774	43344	46590.4
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	VDVNTDR	VDVNTDR	2	VDVNTDR2	65390.5	61525	
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	VDVNTDRR	VDVNTDRR	2	VDVNTDRR2			105407
A0A8I6A5X2	A0A8I6A5X2	A0A8I6A5X2_RAT	Usp32	ubiquitinyl hydrolase 1	1	VDVQNPAGEEDVLLSK	VDVQNPAGEEDVLLSK	2	VDVQNPAGEEDVLLSK2	3367.57		2115.83
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	VDVQVLK	VDVQVLK	2	VDVQVLK2	130969	161718	123272
P85171	P85171	MDGA1_RAT	Mdga1	MAM domain-containing glycosylphosphatidylinositol anchor protein 1	1	VDVQYLDEPVLTVHQTVSDVR	VDVQYLDEPVLTVHQTVSDVR	3	VDVQYLDEPVLTVHQTVSDVR3	6289.68	955.267	3314.93
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	VDVSPTSQR	VDVSPTSQR	2	VDVSPTSQR2	404497	362335	430015
A0A8I5ZPV1	A0A8I5ZPV1	A0A8I5ZPV1_RAT	Tbc1d22a	TBC1 domain family, member 22a	1	VDVSSVPAEVLR	VDVSSVPAEVLR	2	VDVSSVPAEVLR2	27967.9	25027.5	29529.9
A0A8I6A1Z5	A0A8I6A1Z5	A0A8I6A1Z5_RAT	Tmx1	Thioredoxin-related transmembrane protein 1	1	VDVTEQTGLSGR	VDVTEQTGLSGR	2	VDVTEQTGLSGR2	124343	154647	147200
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	VDVTSSFPMTDTAR	VDVTSSFPMTDTAR	2	VDVTSSFPMTDTAR2	17217.8	21390	9220.12
O88664	O88664;Q9JLS3	TAOK1_RAT	Taok1	Serine/threonine-protein kinase TAO1	0	VDVWSLGITCIELAER	VDVWSLGITC(UniMod:4)IELAER	2	VDVWSLGITC(UniMod:4)IELAER2	1493.53		
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	VDVYGFVSR	VDVYGFVSR	2	VDVYGFVSR2	74624	68722.1	88619.4
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	VDVYGYVVNLR	VDVYGYVVNLR	2	VDVYGYVVNLR2	46169	38338.5	31050.1
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	VDVYGYVVNLR	VDVYGYVVNLR	3	VDVYGYVVNLR3	3465.45	3437.73	10385.6
Q64194	Q64194	LICH_RAT	Lipa	Lysosomal acid lipase/cholesteryl ester hydrolase	1	VDVYTTHCPAGTSVQNMVHWTQVVK	VDVYTTHC(UniMod:4)PAGTSVQNMVHWTQVVK	3	VDVYTTHC(UniMod:4)PAGTSVQNMVHWTQVVK3	1683.77		1794.48
Q64194	Q64194	LICH_RAT	Lipa	Lysosomal acid lipase/cholesteryl ester hydrolase	1	VDVYTTHCPAGTSVQNMVHWTQVVK	VDVYTTHC(UniMod:4)PAGTSVQNMVHWTQVVK	4	VDVYTTHC(UniMod:4)PAGTSVQNMVHWTQVVK4	9774.17	19141.4	8717.94
Q5U2N3	Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	1	VDVYVMTQPLSGK	VDVYVMTQPLSGK	2	VDVYVMTQPLSGK2	5340.17	5216.62	5733.13
Q5RKI1	Q3B8Q2;Q5RKI1;Q6P3V8	IF4A2_RAT	Eif4a2	Eukaryotic initiation factor 4A-II	0	VDWLTEK	VDWLTEK	2	VDWLTEK2	221663	163470	176587
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	VDWQENDFSK	VDWQENDFSK	2	VDWQENDFSK2	4772.1	1658.6	2807.29
Q66H84	Q66H84	MAPK3_RAT	Mapkapk3	MAP kinase-activated protein kinase 3	1	VDYDQVK	VDYDQVK	2	VDYDQVK2	60402.2	81845	71446.5
Q80ZF4	Q80ZF4	Q80ZF4_RAT	Mapkapk2	non-specific serine/threonine protein kinase	1	VDYEQVK	VDYEQVK	2	VDYEQVK2	30285.7	32816.6	35051.7
P15473	P15473	IBP3_RAT	Igfbp3	Insulin-like growth factor-binding protein 3	1	VDYESQSTDTQNFSSESK	VDYESQSTDTQNFSSESK	3	VDYESQSTDTQNFSSESK3	2229.23	3143.35	2782.94
Q7TP42	Q7TP42	Q7TP42_RAT	Sec62	Translocation protein SEC62	1	VDYFIASK	VDYFIASK	1	VDYFIASK1	2539.39	2501.59	3150.18
Q7TP42	Q7TP42	Q7TP42_RAT	Sec62	Translocation protein SEC62	1	VDYFIASK	VDYFIASK	2	VDYFIASK2	204632	197739	237398
Q10473	Q10473	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	1	VDYGDISSR	VDYGDISSR	2	VDYGDISSR2	77614.6	60539.3	57452.2
P31044	P31044	PEBP1_RAT	Pebp1	Phosphatidylethanolamine-binding protein 1	1	VDYGGVTVDELGK	VDYGGVTVDELGK	2	VDYGGVTVDELGK2	21211.2		13447.1
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	VDYIMQLPVPMDAALNK	VDYIMQLPVPMDAALNK	2	VDYIMQLPVPMDAALNK2	74266.8	76714.5	87479
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	VDYIMQLPVPMDAALNK	VDYIMQLPVPMDAALNK	3	VDYIMQLPVPMDAALNK3	141293	104803	163497
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	VDYISTSR	VDYISTSR	2	VDYISTSR2	190986	199459	210681
Q62812	Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	VDYKADEWLMK	VDYKADEWLMK	3	VDYKADEWLMK3	14128.4	14639.4	9486.29
A0A8I5ZNG4	A0A8I5ZNG4	A0A8I5ZNG4_RAT	Rictor	RPTOR independent companion of MTOR, complex 2	1	VDYLIAR	VDYLIAR	2	VDYLIAR2	7914.67	5656.4	7699.94
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	VDYLSSLGK	VDYLSSLGK	2	VDYLSSLGK2	67550.4	54512.4	55064.9
Q9WVJ4	Q9WVJ4	SYJ2B_RAT	Synj2bp	Synaptojanin-2-binding protein	1	VDYLVSEEEINLTR	VDYLVSEEEINLTR	2	VDYLVSEEEINLTR2	13236.7	7297.47	6899.58
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	VDYQTGPIVWGEPGTNGQHAFYQLIHQGTK	VDYQTGPIVWGEPGTNGQHAFYQLIHQGTK	4	VDYQTGPIVWGEPGTNGQHAFYQLIHQGTK4	30034.7	26592.2	24836.3
A0A8J8Y9E0	A0A8J8Y9E0	A0A8J8Y9E0_RAT	Tra2a	Transformer 2 alpha homolog	1	VDYSITK	VDYSITK	2	VDYSITK2		4777.8	7723.68
Q9EQH1	Q9EQH1	GAB2_RAT	Gab2	GRB2-associated-binding protein 2	1	VDYVQVDKEK	VDYVQVDKEK	3	VDYVQVDKEK3	5629.97	4599.79	3900.86
Q6AYU3	D3ZN46;Q6AYU3;A0A8I5ZLJ4	DNJB6_RAT	Dnajb6	DnaJ homolog subfamily B member 6	0	VDYYEVLGVQR	VDYYEVLGVQR	2	VDYYEVLGVQR2	17347.1	18108.3	19859.3
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	VEAAAEVPHR	VEAAAEVPHR	2	VEAAAEVPHR2	5656.62	4465.48	3712.76
Q8R1R5	Q8R1R5	C99L2_RAT	Cd99l2	CD99 antigen-like protein 2	1	VEAAMCEAPPVTDSTQHSQPTEPLAPERPR	VEAAMC(UniMod:4)EAPPVTDSTQHSQPTEPLAPERPR	4	VEAAMC(UniMod:4)EAPPVTDSTQHSQPTEPLAPERPR4	10108		
F1MAH6	F1MAH6	F1MAH6_RAT	Cdh11	Cadherin 11	1	VEAANVHIDPK	VEAANVHIDPK	2	VEAANVHIDPK2	4908.13		
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	VEAAQETVADYQQTIK	VEAAQETVADYQQTIK	2	VEAAQETVADYQQTIK2	9639.49	3914.94	6427.13
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	VEAAQETVADYQQTIK	VEAAQETVADYQQTIK	3	VEAAQETVADYQQTIK3	6319.43	9173.97	10786.8
Q499T2	Q499T2	GILT_RAT	Ifi30	Gamma-interferon-inducible lysosomal thiol reductase	1	VEACLLDK	VEAC(UniMod:4)LLDK	2	VEAC(UniMod:4)LLDK2	101852	26256.9	80454.3
Q499T2	Q499T2	GILT_RAT	Ifi30	Gamma-interferon-inducible lysosomal thiol reductase	1	VEACLLDKLEK	VEAC(UniMod:4)LLDKLEK	3	VEAC(UniMod:4)LLDKLEK3	19102.8	12144.7	12528.8
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	VEADDHQGFVPAVYVR	VEADDHQGFVPAVYVR	2	VEADDHQGFVPAVYVR2	2085.68		
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	VEADDHQGFVPAVYVR	VEADDHQGFVPAVYVR	3	VEADDHQGFVPAVYVR3	13582.7	12766.5	12246.1
D3ZYT2	D3ZYT2	D3ZYT2_RAT	Mrps5	Mitochondrial ribosomal protein S5	1	VEADMAEQREEWDR	VEADMAEQREEWDR	3	VEADMAEQREEWDR3	6592.94	8372.09	5577.63
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	VEAEGLAALHSLTACLSCSVLR	VEAEGLAALHSLTAC(UniMod:4)LSC(UniMod:4)SVLR	3	VEAEGLAALHSLTAC(UniMod:4)LSC(UniMod:4)SVLR3	9522.54	15529.4	4128
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	VEAELLPQCWEQINHK	VEAELLPQC(UniMod:4)WEQINHK	3	VEAELLPQC(UniMod:4)WEQINHK3	49335.6	39290.7	47331.7
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	VEAELLPQCWEQINHKYPER	VEAELLPQC(UniMod:4)WEQINHKYPER	4	VEAELLPQC(UniMod:4)WEQINHKYPER4	9165.42	9665.38	12945.5
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	VEAFLITMEK	VEAFLITMEK	2	VEAFLITMEK2	22645.1	20046.1	28492.2
Q63798	Q63798	PSME2_RAT	Psme2	Proteasome activator complex subunit 2	1	VEAFQTAISK	VEAFQTAISK	2	VEAFQTAISK2	153978	132891	108931
Q9JJ05	Q9JJ05	C1GLT_RAT	C1galt1	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1	1	VEAGDSRDPTGK	VEAGDSRDPTGK	2	VEAGDSRDPTGK2			1050.33
P60123	A0A0G2K0H9;P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	0	VEAGDVIYIEANSGAVK	VEAGDVIYIEANSGAVK	2	VEAGDVIYIEANSGAVK2	20320.6	9601.37	10443
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	VEAGQEDDEDK	VEAGQEDDEDK	2	VEAGQEDDEDK2			3249.46
Q76GL9	Q76GL9	Q76GL9_RAT	Slc1a4	Amino acid transporter	1	VEAIPNSK	VEAIPNSK	2	VEAIPNSK2	49183.1	43501	45861.2
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	VEALDSLQSK	VEALDSLQSK	2	VEALDSLQSK2	52174	49919.6	48766.2
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	VEALEQDRER	VEALEQDRER	3	VEALEQDRER3	59240.6	78960.3	54571.6
P62882	P62882	GNB5_RAT	Gnb5	Guanine nucleotide-binding protein subunit beta-5	1	VEALGQFVMK	VEALGQFVMK	2	VEALGQFVMK2	11215.7		8020.11
P08592	P08592;P15943	A4_RAT	App	Amyloid-beta precursor protein	0	VEAMLNDR	VEAMLNDR	2	VEAMLNDR2	189650	228012	209343
A0A8I6AEI3	A0A8I6AEI3	A0A8I6AEI3_RAT	Wwox	WW domain-containing oxidoreductase	1	VEAMTLDLAVLR	VEAMTLDLAVLR	2	VEAMTLDLAVLR2	16202.1	11568.8	11761.4
P68182	P68182;P27791	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	0	VEAPFIPK	VEAPFIPK	2	VEAPFIPK2	832447	788516	719458
D4A8B0	D4A8B0	D4A8B0_RAT	Sec14l5	SEC14-like lipid binding 5	1	VEAPLICR	VEAPLIC(UniMod:4)R	2	VEAPLIC(UniMod:4)R2	45129.8	38049.1	29533.1
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VEAQLQELQVK	VEAQLQELQVK	2	VEAQLQELQVK2	8.60775e+06	9.56427e+06	9.15426e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VEAQLQELQVK	VEAQLQELQVK	3	VEAQLQELQVK3	460599	524976	493695
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	VEAQVYILSK	VEAQVYILSK	2	VEAQVYILSK2	89233.3	82885.9	92354.8
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	VEASIMK	VEASIMK	1	VEASIMK1	31237.9	26651.3	23493.3
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	VEASIMK	VEASIMK	2	VEASIMK2	3.41168e+06	3.2089e+06	3.52299e+06
P08649	P08649	CO4_RAT	C4	Complement C4	1	VEASITK	VEASITK	1	VEASITK1	90895.8	53944.1	98777.6
P55280	P55280	CADH6_RAT	Cdh6	Cadherin-6	1	VEASNPHIEPR	VEASNPHIEPR	2	VEASNPHIEPR2	2874.47		4088.67
P55280	P55280	CADH6_RAT	Cdh6	Cadherin-6	1	VEASNPHIEPR	VEASNPHIEPR	3	VEASNPHIEPR3	40661.1	36321.3	45477.6
D4ADG2	D4ADG2	D4ADG2_RAT	Iba57	Iron-sulfur cluster assembly factor IBA57	1	VEATTMLIR	VEATTMLIR	2	VEATTMLIR2	5144.92	4878.57	10675.9
D3ZMR9	D3ZMR9	D3ZMR9_RAT	Mrpl21	Mitochondrial ribosomal protein L21	1	VEATVIEK	VEATVIEK	2	VEATVIEK2	5685.45	10166.2	6328.41
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	VEAVLSR	VEAVLSR	2	VEAVLSR2	650778	652694	671816
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	VEAVNMAEGIIHDTETK	VEAVNMAEGIIHDTETK	2	VEAVNMAEGIIHDTETK2	16225.8	10740.9	13454.2
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	VEAVNMAEGIIHDTETK	VEAVNMAEGIIHDTETK	3	VEAVNMAEGIIHDTETK3	157545	130651	131545
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	VEAYQWSVSDGR	VEAYQWSVSDGR	2	VEAYQWSVSDGR2	12867.8	12543.6	19268.3
Q6AYI8	Q6AYI8	Q6AYI8_RAT	Edem2	alpha-1,2-Mannosidase	1	VECGFATIK	VEC(UniMod:4)GFATIK	2	VEC(UniMod:4)GFATIK2	7144.33	4720.44	
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	VECHYTLPPGTTPSASDWIGIFK	VEC(UniMod:4)HYTLPPGTTPSASDWIGIFK	3	VEC(UniMod:4)HYTLPPGTTPSASDWIGIFK3	14446.3		17287
A0A8I6AZI9	A0A8I6AZI9	A0A8I6AZI9_RAT	Ubash3a	Ubiquitin associated and SH3 domain containing, A	1	VECLYEALR	VEC(UniMod:4)LYEALR	2	VEC(UniMod:4)LYEALR2	4115.28	4173.73	
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	VECMMLCEGTAIVLDMVRPK	VEC(UniMod:4)MMLC(UniMod:4)EGTAIVLDMVRPK	3	VEC(UniMod:4)MMLC(UniMod:4)EGTAIVLDMVRPK3	36801.6	35748.9	35067.2
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	VECSGNLFTQR	VEC(UniMod:4)SGNLFTQR	2	VEC(UniMod:4)SGNLFTQR2	3.56154e+06	4.08638e+06	4.25249e+06
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	VECSGNLFTQR	VEC(UniMod:4)SGNLFTQR	3	VEC(UniMod:4)SGNLFTQR3	190298	229681	247546
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	VECVGDDIAWMR	VEC(UniMod:4)VGDDIAWMR	2	VEC(UniMod:4)VGDDIAWMR2	132518	136389	128593
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	VECVGDDIAWMR	VEC(UniMod:4)VGDDIAWMR	3	VEC(UniMod:4)VGDDIAWMR3	2841.4	6105.58	5991.87
D3ZLA3	D3ZLA3	D3ZLA3_RAT	Cpne3	Copine 3	1	VECYDYDNDGSHDLIGTFQTTMTK	VEC(UniMod:4)YDYDNDGSHDLIGTFQTTMTK	3	VEC(UniMod:4)YDYDNDGSHDLIGTFQTTMTK3	11427.1	9665.5	13750.6
A0A8I6AQW7	A0A8I6AQW7	A0A8I6AQW7_RAT	Msi2	Musashi RNA-binding protein 2	1	VEDAMLMFDK	VEDAMLMFDK	2	VEDAMLMFDK2	18921.2	18447.5	24392.8
B0BNN4	B0BNN4	B0BNN4_RAT	Cfp	Complement factor properdin	1	VEDCCLNTAYAFQEHDGGLCQSCR	VEDC(UniMod:4)C(UniMod:4)LNTAYAFQEHDGGLC(UniMod:4)QSC(UniMod:4)R	3	VEDC(UniMod:4)C(UniMod:4)LNTAYAFQEHDGGLC(UniMod:4)QSC(UniMod:4)R3	57418.1	20960.5	27808.1
B0BNN4	B0BNN4	B0BNN4_RAT	Cfp	Complement factor properdin	1	VEDCCLNTAYAFQEHDGGLCQSCR	VEDC(UniMod:4)C(UniMod:4)LNTAYAFQEHDGGLC(UniMod:4)QSC(UniMod:4)R	4	VEDC(UniMod:4)C(UniMod:4)LNTAYAFQEHDGGLC(UniMod:4)QSC(UniMod:4)R4	3183.57		
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	VEDDSNTCAPQGGLEK	VEDDSNTC(UniMod:4)APQGGLEK	2	VEDDSNTC(UniMod:4)APQGGLEK2	4945.36	3005.81	4820.34
D3ZJR7	D3ZJR7	D3ZJR7_RAT	Dsc2	Desmocollin 2	1	VEDENDNYPIFTQK	VEDENDNYPIFTQK	2	VEDENDNYPIFTQK2	39569	38388.2	47567.7
D3ZJR7	D3ZJR7	D3ZJR7_RAT	Dsc2	Desmocollin 2	1	VEDENDNYPIFTQK	VEDENDNYPIFTQK	3	VEDENDNYPIFTQK3		5610.43	9002.03
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	VEDFYSK	VEDFYSK	2	VEDFYSK2	66728.5	68031.5	78449.5
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	VEDLCCTLYDMLASAK	VEDLC(UniMod:4)C(UniMod:4)TLYDMLASAK	2	VEDLC(UniMod:4)C(UniMod:4)TLYDMLASAK2		2895.39	3841.89
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	VEDLFLTFAK	VEDLFLTFAK	2	VEDLFLTFAK2	208846	200609	216726
A0A8I6AC50	A0A8I6AC50	A0A8I6AC50_RAT	Ttc13	Tetratricopeptide repeat domain 13	1	VEDLLPIMK	VEDLLPIMK	2	VEDLLPIMK2	6887.94	6017.93	
O55156	O55156;Q9JK25	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	0	VEDLQFR	VEDLQFR	2	VEDLQFR2	325044	314467	320797
O55156	O55156;Q9JK25	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	0	VEDLQFRVEEESITK	VEDLQFRVEEESITK	3	VEDLQFRVEEESITK3	32567.9	52190.2	47836
D3ZBC4	D3ZBC4	D3ZBC4_RAT	Atxn1l	Alanine and glycine-rich protein-like	1	VEDLQTQDFVR	VEDLQTQDFVR	2	VEDLQTQDFVR2		1295.63	
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	VEDLSTCNDLIAK	VEDLSTC(UniMod:4)NDLIAK	2	VEDLSTC(UniMod:4)NDLIAK2	119324	132749	127673
Q63009	Q63009;A0A0G2K9I8	ANM1_RAT	Prmt1	Protein arginine N-methyltransferase 1	0	VEDLTFTSPFCLQVK	VEDLTFTSPFC(UniMod:4)LQVK	2	VEDLTFTSPFC(UniMod:4)LQVK2	9959.93	19171.3	12572.5
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	VEDLVDQLSK	VEDLVDQLSK	2	VEDLVDQLSK2	32129.7	34723.3	28837.1
Q62812	Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	VEDMAELTCLNEASVLHNLK	VEDMAELTC(UniMod:4)LNEASVLHNLK	3	VEDMAELTC(UniMod:4)LNEASVLHNLK3	5.56417e+06	6.2716e+06	6.19025e+06
Q62812	Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	VEDMAELTCLNEASVLHNLK	VEDMAELTC(UniMod:4)LNEASVLHNLK	4	VEDMAELTC(UniMod:4)LNEASVLHNLK4	9815.54	20318.9	27195.4
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VEDMAELTCLNEASVLHNLKER	VEDMAELTC(UniMod:4)LNEASVLHNLKER	3	VEDMAELTC(UniMod:4)LNEASVLHNLKER3	110421	158104	145814
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VEDMAELTCLNEASVLHNLKER	VEDMAELTC(UniMod:4)LNEASVLHNLKER	4	VEDMAELTC(UniMod:4)LNEASVLHNLKER4	341239	481654	519452
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	VEDPAVIMR	VEDPAVIMR	2	VEDPAVIMR2	57571.7	72256	49415.3
A0A0G2KAF4	A0A0G2KAF4	A0A0G2KAF4_RAT	Nfxl1	Nuclear transcription factor, X-box binding-like 1	1	VEDPPLDPWLVPHSCGQVCER	VEDPPLDPWLVPHSC(UniMod:4)GQVC(UniMod:4)ER	3	VEDPPLDPWLVPHSC(UniMod:4)GQVC(UniMod:4)ER3	6539.55	9566.09	7593.8
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VEDPTFLNQLQSGVNR	VEDPTFLNQLQSGVNR	2	VEDPTFLNQLQSGVNR2	53905.9	73581	74332.4
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VEDPTFLNQLQSGVNR	VEDPTFLNQLQSGVNR	3	VEDPTFLNQLQSGVNR3	39220.3	39839.7	44091
P10252	P10252	CD48_RAT	Cd48	CD48 antigen	1	VEDQGVDYTWYEDSGPFPQR	VEDQGVDYTWYEDSGPFPQR	3	VEDQGVDYTWYEDSGPFPQR3	236594	246326	292325
P53534	P53534	PYGB_RAT	Pygb	Glycogen phosphorylase, brain form (Fragment)	1	VEDVEALDQK	VEDVEALDQK	2	VEDVEALDQK2	30152.8	25733.5	26257.3
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	VEDVLHR	VEDVLHR	2	VEDVLHR2	28532.3	22392.1	21022.7
B1H249	B1H249	B1H249_RAT	Gnpnat1	Glucosamine 6-phosphate N-acetyltransferase	1	VEDVVVSDECR	VEDVVVSDEC(UniMod:4)R	2	VEDVVVSDEC(UniMod:4)R2		1914.61	2202.34
Q5RJK5	A0A0G2JYP0;Q5RJK5	Q5RJK5_RAT	Cbx3	Chromobox 3	0	VEEAEPEEFVVEK	VEEAEPEEFVVEK	2	VEEAEPEEFVVEK2	20768.5	13622.7	6911.76
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	VEEDTLQGLK	VEEDTLQGLK	2	VEEDTLQGLK2	20641.1	26854.9	15220.4
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	VEEDVASDLVMK	VEEDVASDLVMK	2	VEEDVASDLVMK2	120868	107539	110057
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VEEEAAQK	VEEEAAQK	1	VEEEAAQK1			1727.02
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VEEEAAQK	VEEEAAQK	2	VEEEAAQK2			929781
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	VEEEAWDLDVK	VEEEAWDLDVK	2	VEEEAWDLDVK2	4084.93		
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VEEEEER	VEEEEER	1	VEEEEER1			2824.35
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VEEEEER	VEEEEER	2	VEEEEER2			3.5458e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VEEEEERCQYLQAEK	VEEEEERC(UniMod:4)QYLQAEK	2	VEEEEERC(UniMod:4)QYLQAEK2	4498.37	883.941	3892.71
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VEEEEERCQYLQAEK	VEEEEERC(UniMod:4)QYLQAEK	3	VEEEEERC(UniMod:4)QYLQAEK3	483767	559726	539697
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VEEEEERCQYLQAEKK	VEEEEERC(UniMod:4)QYLQAEKK	3	VEEEEERC(UniMod:4)QYLQAEKK3	12316.4	17872.6	16946.9
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VEEEEERCQYLQAEKK	VEEEEERC(UniMod:4)QYLQAEKK	4	VEEEEERC(UniMod:4)QYLQAEKK4	9320.48	12077.8	16341.3
Q80ZG6	Q80ZG6	BBC3_RAT	Bbc3	Bcl-2-binding component 3	1	VEEEEWAR	VEEEEWAR	2	VEEEEWAR2	4358.9	3982.21	
F1M386	F1M386	RPGF2_RAT	Rapgef2	Rap guanine nucleotide exchange factor 2	1	VEEEGEIVMVK	VEEEGEIVMVK	2	VEEEGEIVMVK2		6237.38	4122.98
Q6PCT3	Q6PCT3	TPD54_RAT	Tpd52l2	Tumor protein D54	1	VEEEIVTLR	VEEEIVTLR	2	VEEEIVTLR2	12244.7	11523.9	21768.3
A0A0G2K5D7	A0A0G2K5D7	A0A0G2K5D7_RAT	Specc1	Sperm antigen with calponin homology and coiled-coil domains 1	1	VEEENQGAIDMIK	VEEENQGAIDMIK	2	VEEENQGAIDMIK2	46561.7	31836.2	31072.9
A0A8I5ZRT6	A0A8I5ZRT6	A0A8I5ZRT6_RAT	Dock2	Dedicator of cytokinesis 2	1	VEEEPISPGSTLPEVK	VEEEPISPGSTLPEVK	2	VEEEPISPGSTLPEVK2	1486.76		2310.07
A0A8I6A1Z5	A0A8I6A1Z5	A0A8I6A1Z5_RAT	Tmx1	Thioredoxin-related transmembrane protein 1	1	VEEEQEADEEDVSEEETENREGESK	VEEEQEADEEDVSEEETENREGESK	3	VEEEQEADEEDVSEEETENREGESK3	4474.89		6447.49
O55156	O55156;Q9JK25	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	0	VEEESITK	VEEESITK	1	VEEESITK1	705.905	1186.71	
O55156	O55156;Q9JK25	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	0	VEEESITK	VEEESITK	2	VEEESITK2	292862	312313	278369
P27321	P27321	ICAL_RAT	Cast	Calpastatin	1	VEEEVMNDQALQALSDSLGTR	VEEEVMNDQALQALSDSLGTR	3	VEEEVMNDQALQALSDSLGTR3	25300.9	34566.4	37975.3
Q5PPJ9	Q5PPJ9	SHLB2_RAT	Sh3glb2	Endophilin-B2	1	VEEFLYEK	VEEFLYEK	2	VEEFLYEK2	48271.2	31384.5	23313.8
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	VEEGDTGDMPGPSGAENR	VEEGDTGDMPGPSGAENR	2	VEEGDTGDMPGPSGAENR2	68587.9	99692.5	79974.1
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	VEEGDTGDMPGPSGAENR	VEEGDTGDMPGPSGAENR	3	VEEGDTGDMPGPSGAENR3	8494.06	7915.28	8960.65
O55043	O55043	ARHG7_RAT	Arhgef7	Rho guanine nucleotide exchange factor 7	1	VEEGGWWEGTHNGR	VEEGGWWEGTHNGR	3	VEEGGWWEGTHNGR3	2154.43		5675.49
Q32KK0	Q32KK0	Q32KK0_RAT	Arsl	Arylsulfatase E	1	VEEHDPPLLFELTSDPGEVRPLR	VEEHDPPLLFELTSDPGEVRPLR	4	VEEHDPPLLFELTSDPGEVRPLR4	32878.7	28910.3	52336
P62718	P62718	RL18A_RAT	Rpl18a	Large ribosomal subunit protein eL20	1	VEEIAAGK	VEEIAAGK	2	VEEIAAGK2		59900.5	41545.9
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	VEEIICGLIK	VEEIIC(UniMod:4)GLIK	2	VEEIIC(UniMod:4)GLIK2	68144.5	66188.8	80798.1
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	VEEIIPAAR	VEEIIPAAR	2	VEEIIPAAR2	54068	49772.8	60537.8
Q66H50	Q66H50	FACR1_RAT	Far1	Fatty acyl-CoA reductase 1	1	VEEILSGK	VEEILSGK	2	VEEILSGK2	9217.03	9779.58	9014
P35815	P35815	PPM1B_RAT	Ppm1b	Protein phosphatase 1B	1	VEEIMQK	VEEIMQK	2	VEEIMQK2	133148	134249	125365
D3ZGN7	D4A1F2;D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	0	VEEISGVAFIFNQK	VEEISGVAFIFNQK	2	VEEISGVAFIFNQK2			9735.41
B2RYI2	B2RYI2	B2RYI2_RAT	Srp68	Signal recognition particle subunit SRP68	1	VEEISPNIR	VEEISPNIR	2	VEEISPNIR2	12125.3	11083.1	18871.2
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	VEEKPPNPMEGMTEEQK	VEEKPPNPMEGMTEEQK	3	VEEKPPNPMEGMTEEQK3	6615.9	18608.3	16492.5
A0A8I5ZVX1	A0A8I5ZVX1	A0A8I5ZVX1_RAT	Ppfibp2	PPFIA binding protein 2	1	VEELENER	VEELENER	2	VEELENER2	11138.5		
A0A096MK24	A0A096MK24	A0A096MK24_RAT	Morc4	Microrchidia 4	1	VEELEQEK	VEELEQEK	2	VEELEQEK2	5152.08	7225.49	2542.72
Q5M7A4	Q5M7A4	UBA5_RAT	Uba5	Ubiquitin-like modifier-activating enzyme 5	1	VEELEQELAR	VEELEQELAR	2	VEELEQELAR2	165063	167784	193630
A0A8I6ARU6	A0A8I6ARU6	A0A8I6ARU6_RAT	Galk1	Galactokinase 1	1	VEELLAEAR	VEELLAEAR	2	VEELLAEAR2	18917.4	12028.9	18294
D4A3X1	D4A3X1	D4A3X1_RAT	RGD1308601	RIKEN cDNA 8030462N17 gene	1	VEELTESAAPPK	VEELTESAAPPK	2	VEELTESAAPPK2	8009.34	9501.1	18302.3
D3ZRC4	D3ZRC4	PLPL8_RAT	Pnpla8	Calcium-independent phospholipase A2-gamma	1	VEELTFHLLEFPEGK	VEELTFHLLEFPEGK	3	VEELTFHLLEFPEGK3	10127.1	6266.4	8186.7
O88422	O88422	GALT5_RAT	Galnt5	Polypeptide N-acetylgalactosaminyltransferase 5	1	VEENVDQVQR	VEENVDQVQR	2	VEENVDQVQR2	8207	13439.2	8110.17
A0A8I6A7S3	A0A8I6A7S3	A0A8I6A7S3_RAT	Atpaf2	ATP synthase mitochondrial F1 complex assembly factor 2	1	VEEPETLVELQK	VEEPETLVELQK	2	VEEPETLVELQK2	4978.57	4138.09	7235.94
P08650	P08650	CO5_RAT	C5	Complement C5	1	VEEQAAKYK	VEEQAAKYK	2	VEEQAAKYK2			5426.17
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	VEEQDKEIK	VEEQDKEIK	2	VEEQDKEIK2			7389.28
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	VEEQVNLR	VEEQVNLR	2	VEEQVNLR2	5180.51	4783.9	
Q923U9	Q923U9	S40A1_RAT	Slc40a1	Solute carrier family 40 member 1	1	VEESELK	VEESELK	2	VEESELK2	161088	218031	197258
F1M332	F1M332	F1M332_RAT	Arhgap28	Rho GTPase activating protein 28	1	VEESGLESEGIFR	VEESGLESEGIFR	2	VEESGLESEGIFR2	7119.89	11349.8	3891.13
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	VEESGVSISWSPPEGTTAR	VEESGVSISWSPPEGTTAR	3	VEESGVSISWSPPEGTTAR3	7850.79	15669	10223.3
Q63525	Q63525	NUDC_RAT	Nudc	Nuclear migration protein nudC	1	VEESSWLIEDGK	VEESSWLIEDGK	2	VEESSWLIEDGK2	20871.9	13458.8	11755.2
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	VEESYTLLCQR	VEESYTLLC(UniMod:4)QR	2	VEESYTLLC(UniMod:4)QR2	19663.5	30164.6	19189.1
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	VEEVEEDSEVLASEK	VEEVEEDSEVLASEK	2	VEEVEEDSEVLASEK2	6763.52	3053.28	5313.73
Q63009	Q63009;F1LWG2	ANM1_RAT	Prmt1	Protein arginine N-methyltransferase 1	0	VEEVELPVEK	VEEVELPVEK	2	VEEVELPVEK2	38836.5	59640.5	50059.8
Q9WUD2	Q9WUD2	TRPV2_RAT	Trpv2	Transient receptor potential cation channel subfamily V member 2	1	VEEVNWAAWEK	VEEVNWAAWEK	2	VEEVNWAAWEK2	29627.9	9402.9	32786.8
A0A8I6ASF5	A0A8I6ASF5	A0A8I6ASF5_RAT	Rpl4-ps1	Similar to 60S ribosomal protein L4 (L1)	1	VEEVPELPLVVEDK	VEEVPELPLVVEDK	2	VEEVPELPLVVEDK2	38057.1	37341	43223.7
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	VEEVRDAMENEMR	VEEVRDAMENEMR	3	VEEVRDAMENEMR3	75897.5	90491.7	77104.1
E9PT79	E9PT79	E9PT79_RAT	Tsn	Translin	1	VEEVVYDLSIR	VEEVVYDLSIR	2	VEEVVYDLSIR2	39272.8	35339.2	44095.8
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	VEEYFFGK	VEEYFFGK	2	VEEYFFGK2	11705.9	6930.23	8354.14
A0A0G2JUF2	A0A0G2JUF2	A0A0G2JUF2_RAT	Snx30	Sorting nexin family member 30	1	VEFDLPEYSVR	VEFDLPEYSVR	2	VEFDLPEYSVR2	13736	16976.1	16597.7
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	VEFEELCADLFDR	VEFEELC(UniMod:4)ADLFDR	2	VEFEELC(UniMod:4)ADLFDR2	37776.7	22709.6	31944.5
D3ZXY2	D3ZXY2	D3ZXY2_RAT	Pdzd8	PDZ domain containing 8	1	VEFEELLQTK	VEFEELLQTK	2	VEFEELLQTK2	5724.75	4954.38	3657.62
F1M784	F1M784	F1M784_RAT	Pik3ap1	Phosphoinositide-3-kinase adaptor protein 1	1	VEFGVYESGPR	VEFGVYESGPR	2	VEFGVYESGPR2	16577.4	31942.5	19628.7
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	VEFHISK	VEFHISK	2	VEFHISK2	8461.13	7657.16	
Q9ES02	Q9ES02	MEPE_RAT	Mepe	Matrix extracellular phosphoglycoprotein	1	VEFHYPQAPSK	VEFHYPQAPSK	3	VEFHYPQAPSK3	20358.6	21483.4	13641.3
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	VEFILEQMR	VEFILEQMR	2	VEFILEQMR2	210263	200716	196511
Q4FZX7	Q4FZX7	SRPRB_RAT	Srprb	Signal recognition particle receptor subunit beta	1	VEFLECSAK	VEFLEC(UniMod:4)SAK	2	VEFLEC(UniMod:4)SAK2	88793.4	90437	83140.1
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	VEFLPVHWHSALGGHATGVDR	VEFLPVHWHSALGGHATGVDR	4	VEFLPVHWHSALGGHATGVDR4	15086.5	11103.6	15530.1
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	VEFLPVNWHSPLHSTGVDIDLQR	VEFLPVNWHSPLHSTGVDIDLQR	4	VEFLPVNWHSPLHSTGVDIDLQR4	18119.2	12003.6	10083.6
P62859	A0A8I6APW3;P62859;F1M168;A0A0A0MY14	RS28_RAT	Rps28	Small ribosomal subunit protein eS28	0	VEFMDDTSR	VEFMDDTSR	2	VEFMDDTSR2	26567.1	19307.6	18564.8
Q7TPL3	Q7TPL3;Q7TQ24;Q7TNY1	BACD3_RAT	Kctd10	BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3	0	VEFPEAR	VEFPEAR	2	VEFPEAR2	9826.73	5875.99	
P36372	P36372	TAP2_RAT	Tap2	Antigen peptide transporter 2	1	VEFQDVSFSYPSRPEKPVLQGLTFTLHPGK	VEFQDVSFSYPSRPEKPVLQGLTFTLHPGK	4	VEFQDVSFSYPSRPEKPVLQGLTFTLHPGK4	7586.88	9041.59	13550.8
P18395	P18395	CSDE1_RAT	Csde1	Cold shock domain-containing protein E1	1	VEFSISDK	VEFSISDK	2	VEFSISDK2	18883.9	17103.9	18787.7
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	VEFSLTDYGAK	VEFSLTDYGAK	2	VEFSLTDYGAK2	4585.05	6907.63	2040.15
Q5XI55	Q5XI55	NGLY1_RAT	Ngly1	Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase	1	VEFSQHPAAVR	VEFSQHPAAVR	3	VEFSQHPAAVR3	15805.2	9411.99	9665.58
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	VEFVFSYGPEK	VEFVFSYGPEK	2	VEFVFSYGPEK2	17746.7	22354.8	13920.4
Q6P799	Q6P799	SYSC_RAT	Sars1	Serine--tRNA ligase, cytoplasmic	1	VEFVHMLNATMCATTR	VEFVHMLNATMC(UniMod:4)ATTR	3	VEFVHMLNATMC(UniMod:4)ATTR3	11919.1	11193.2	9019.59
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	VEGACCPVCLR	VEGAC(UniMod:4)C(UniMod:4)PVC(UniMod:4)LR	2	VEGAC(UniMod:4)C(UniMod:4)PVC(UniMod:4)LR2	39230.4	44298.6	40070.4
Q68FX0	Q68FX0	IDH3B_RAT	Idh3B	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	VEGAFPVTMLPGDGVGPELMHAVK	VEGAFPVTMLPGDGVGPELMHAVK	3	VEGAFPVTMLPGDGVGPELMHAVK3	58550.4	56064.8	59334.6
F1M7Q7	F1M7Q7	F1M7Q7_RAT	Otud4	ubiquitinyl hydrolase 1	1	VEGAHSLSEASVSSK	VEGAHSLSEASVSSK	3	VEGAHSLSEASVSSK3	7877.55	4814.77	7577.57
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	VEGDTCSLNEFTITGSTYAPIGEVQK	VEGDTC(UniMod:4)SLNEFTITGSTYAPIGEVQK	3	VEGDTC(UniMod:4)SLNEFTITGSTYAPIGEVQK3	233781	216356	178360
D3ZA32	D3ZA32	D3ZA32_RAT	Gsdma	Gasdermin A	1	VEGDVDVPK	VEGDVDVPK	2	VEGDVDVPK2	25961.9	11443.3	14028.1
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	VEGFPTIYFAPSGDK	VEGFPTIYFAPSGDK	2	VEGFPTIYFAPSGDK2	804511	868588	1.06608e+06
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	VEGFPTIYFAPSGDK	VEGFPTIYFAPSGDK	3	VEGFPTIYFAPSGDK3	35452.6	31944.1	39675.5
Q9QZA6	Q9QZA6	CD151_RAT	Cd151	CD151 antigen	1	VEGGCITK	VEGGC(UniMod:4)ITK	1	VEGGC(UniMod:4)ITK1		750.381	
Q66H39	Q66H39	ABCF3_RAT	Abcf3	ATP-binding cassette sub-family F member 3	1	VEGGFDQYR	VEGGFDQYR	2	VEGGFDQYR2	6614.94	3149.88	9981.79
Q01205	Q01205	ODO2_RAT	Dlst	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial	1	VEGGTPLFTLR	VEGGTPLFTLR	2	VEGGTPLFTLR2	256462	420853	372933
D4A3W2	D4A3W2	D4A3W2_RAT	Crb2	Crumbs cell polarity complex component 2	1	VEGHLLLPEELK	VEGHLLLPEELK	3	VEGHLLLPEELK3	3554.27	3383.98	
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	VEGHVFPEFK	VEGHVFPEFK	2	VEGHVFPEFK2	4625.84	5399.92	2411.9
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	VEGHVFPEFK	VEGHVFPEFK	3	VEGHVFPEFK3	48215.9	49015	38418.2
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	VEGHVTLK	VEGHVTLK	2	VEGHVTLK2	9543.07	8443.86	5818.84
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	VEGIEGSPAEEAR	VEGIEGSPAEEAR	2	VEGIEGSPAEEAR2	14020.5	29244.7	18664.5
Q9WVE9	Q9WVE9	ITSN1_RAT	Itsn1	Intersectin-1	1	VEGLQAQALYPWR	VEGLQAQALYPWR	2	VEGLQAQALYPWR2	24716.8	28491	36479.9
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	VEGMQNQGR	VEGMQNQGR	2	VEGMQNQGR2	80632.8		87918.4
B4F7E8	B4F7E8	NIBA2_RAT	Niban2	Protein Niban 2	1	VEGPAFTDAIR	VEGPAFTDAIR	2	VEGPAFTDAIR2	8679.9	12141.8	9418.38
O08774	O08774	RGS12_RAT	Rgs12	Regulator of G-protein signaling 12	1	VEGSFAQAPLSTQK	VEGSFAQAPLSTQK	2	VEGSFAQAPLSTQK2	8943.96	1462.7	4622.13
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	VEGSSTASSGSQLAEGK	VEGSSTASSGSQLAEGK	2	VEGSSTASSGSQLAEGK2	52441.2	45011.9	39110
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	VEGSSTASSGSQLAEGK	VEGSSTASSGSQLAEGK	3	VEGSSTASSGSQLAEGK3			2041.32
A0A8I6ANU2	A0A8I6ANU2	A0A8I6ANU2_RAT	Ptcd3	Pentatricopeptide repeat domain 3	1	VEGTDITGIEEIVIPK	VEGTDITGIEEIVIPK	2	VEGTDITGIEEIVIPK2	5898.97	4870.45	4413.47
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	VEGTHTPR	VEGTHTPR	2	VEGTHTPR2			6968.82
Q5XIC1	Q5XIC1	GMPPA_RAT	Gmppa	Mannose-1-phosphate guanyltransferase alpha	1	VEGTPNDPNPNDPR	VEGTPNDPNPNDPR	2	VEGTPNDPNPNDPR2	6699.11	14449.8	10541.9
Q5XIN7	Q5XIN7	PMGT1_RAT	Pomgnt1	Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1	1	VEGYGSVCSCK	VEGYGSVC(UniMod:4)SC(UniMod:4)K	2	VEGYGSVC(UniMod:4)SC(UniMod:4)K2	3487.11	2593.43	
Q8K4M9	Q5BK47;Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	0	VEGYIQDK	VEGYIQDK	2	VEGYIQDK2	83681.9	80129	80029.1
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	VEGYSGTAGDSMNYHNGR	VEGYSGTAGDSMNYHNGR	2	VEGYSGTAGDSMNYHNGR2	6288.28	13493.4	15444.4
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	VEGYSGTAGDSMNYHNGR	VEGYSGTAGDSMNYHNGR	3	VEGYSGTAGDSMNYHNGR3	200000	280359	256439
Q63433	Q63433	PKN1_RAT	Pkn1	Serine/threonine-protein kinase N1	1	VEHAVAEGAK	VEHAVAEGAK	2	VEHAVAEGAK2			16345.8
D3ZEJ9	D3ZEJ9	D3ZEJ9_RAT	RGD1310429	Similar to Protein Njmu-R1	1	VEHEEMPEAK	VEHEEMPEAK	2	VEHEEMPEAK2	6815.92		5642.38
D3ZEJ9	D3ZEJ9	D3ZEJ9_RAT	RGD1310429	Similar to Protein Njmu-R1	1	VEHEEMPEAK	VEHEEMPEAK	3	VEHEEMPEAK3	21250.3	16575.7	25050.7
P15978	P15978	HA11_RAT	RT1-Aw2	Class I histocompatibility antigen, Non-RT1.A alpha-1 chain	1	VEHEGLPEPLSQR	VEHEGLPEPLSQR	2	VEHEGLPEPLSQR2	64085.7	42340.6	44281.5
P15978	P15978	HA11_RAT	RT1-Aw2	Class I histocompatibility antigen, Non-RT1.A alpha-1 chain	1	VEHEGLPEPLSQR	VEHEGLPEPLSQR	3	VEHEGLPEPLSQR3	597602	476500	486965
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	VEHFVSILGK	VEHFVSILGK	2	VEHFVSILGK2	3054.16		
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	VEHHDHAVVSGR	VEHHDHAVVSGR	3	VEHHDHAVVSGR3		2162.55	
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	VEHHDLSVAGLQSPDR	VEHHDLSVAGLQSPDR	3	VEHHDLSVAGLQSPDR3	50709.8	68857.8	61167.6
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	VEHHDLSVAGLQSPDR	VEHHDLSVAGLQSPDR	4	VEHHDLSVAGLQSPDR4	68301.3	83729.6	73176.5
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	VEHMVDQLLK	VEHMVDQLLK	2	VEHMVDQLLK2	7274.13	6739.47	6813.13
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	VEHMVDQLLK	VEHMVDQLLK	3	VEHMVDQLLK3	20962.4	28625.3	21257.6
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VEHSGTVLYTLVK	VEHSGTVLYTLVK	2	VEHSGTVLYTLVK2	3181.12		5931.41
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VEHSGTVLYTLVK	VEHSGTVLYTLVK	3	VEHSGTVLYTLVK3	27770.6	40645.7	29648.3
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	VEHVVSVLEK	VEHVVSVLEK	2	VEHVVSVLEK2	29097.2	34753.5	19860.5
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	VEIAGPGFINVHLR	VEIAGPGFINVHLR	2	VEIAGPGFINVHLR2	8106.87	5903.78	
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	VEIAGPGFINVHLR	VEIAGPGFINVHLR	3	VEIAGPGFINVHLR3	40099.5	39461.2	39984.8
P21670	P21670	PSA4_RAT	Psma4	Proteasome subunit alpha type-4	1	VEIATLTR	VEIATLTR	2	VEIATLTR2	11652.3	3.31654e+06	13709.5
Q6AYF1	Q6AYF1	SIN1_RAT	Mapkap1	Target of rapamycin complex 2 subunit MAPKAP1	1	VEIDPVTNQK	VEIDPVTNQK	2	VEIDPVTNQK2	9890.12	4466.21	7778.48
P06761	P06761;P0DMW0;P0DMW1;P55063;P14659;P63018;M0RCB1	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	0	VEIIANDQGNR	VEIIANDQGNR	2	VEIIANDQGNR2	5.4752e+06	5.54803e+06	6.18499e+06
P06761	P06761;P0DMW0;P0DMW1;P55063;P14659;P63018;M0RCB1	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	0	VEIIANDQGNR	VEIIANDQGNR	3	VEIIANDQGNR3	42728.6	53893.4	50574.1
A0A8I5ZV26	A0A8I5ZV26	A0A8I5ZV26_RAT	Stom	Stomatin	1	VEIKDVK	VEIKDVK	2	VEIKDVK2	86521.4	106607	126385
A0A8I6A263	A0A8I6A263	A0A8I6A263_RAT	Aimp1	Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	1	VEILAPPNGSVPGDR	VEILAPPNGSVPGDR	2	VEILAPPNGSVPGDR2	63425.6	69249.1	57340.8
B4F7A3	B4F7A3	B4F7A3_RAT	Lgalsl	Galectin-like	1	VEILCEHPR	VEILC(UniMod:4)EHPR	2	VEILC(UniMod:4)EHPR2	16081.8	11234.9	20824.3
B4F7A3	B4F7A3	B4F7A3_RAT	Lgalsl	Galectin-like	1	VEILCEHPR	VEILC(UniMod:4)EHPR	3	VEILC(UniMod:4)EHPR3	114394	106985	125109
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	VEILNELYQQK	VEILNELYQQK	2	VEILNELYQQK2	14132.7	14620.2	19652.9
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	VEILNPGR	VEILNPGR	2	VEILNPGR2	145058	160670	166668
A0A8I6AI88	A0A8I6AI88	A0A8I6AI88_RAT	Chpf2	Hexosyltransferase	1	VEILPMPYVTEATR	VEILPMPYVTEATR	2	VEILPMPYVTEATR2	6719.79		10449.2
A0A8I6GK03	A0A8I6GK03	A0A8I6GK03_RAT	Tubgcp4	Gamma-tubulin complex component	1	VEILPSYIPVR	VEILPSYIPVR	2	VEILPSYIPVR2	13131.7	6956.27	10715.5
Q5PQN7	Q5PQN7	LZIC_RAT	Lzic	Protein LZIC	1	VEILTALR	VEILTALR	2	VEILTALR2	65874.8	59460.1	51289.1
F1LVL9	F1LVL9	F1LVL9_RAT	LOC100911413	Deleted in malignant brain tumors 1 protein	1	VEILYQGSWGTVCDDSWDINDAK	VEILYQGSWGTVC(UniMod:4)DDSWDINDAK	3	VEILYQGSWGTVC(UniMod:4)DDSWDINDAK3	132179	171158	139388
Q8CIZ5	F1LVL9;Q8CIZ5	DMBT1_RAT	Dmbt1	Deleted in malignant brain tumors 1 protein	0	VEILYQGSWGTVCDDSWDINDANVVCR	VEILYQGSWGTVC(UniMod:4)DDSWDINDANVVC(UniMod:4)R	4	VEILYQGSWGTVC(UniMod:4)DDSWDINDANVVC(UniMod:4)R4	31239.4	51414.9	28183
B2RYM5	B2RYM5	BRCC3_RAT	Brcc3	Lys-63-specific deubiquitinase BRCC36	1	VEISPEQLSAASTEAER	VEISPEQLSAASTEAER	2	VEISPEQLSAASTEAER2	27733.6	14895.6	15871.4
P41562	P41562	IDHC_RAT	Idh1	Isocitrate dehydrogenase [NADP] cytoplasmic	1	VEITYTPK	VEITYTPK	2	VEITYTPK2	24004.3	33803.4	29740.3
P08541	P08541	UD2B2_RAT	Ugt2b	UDP-glucuronosyltransferase 2B2	1	VEIWLIR	VEIWLIR	2	VEIWLIR2	7864.42	5096.06	12634.9
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	VEKAPQETYADIGGLDNQIQEIK	VEKAPQETYADIGGLDNQIQEIK	3	VEKAPQETYADIGGLDNQIQEIK3	7218.55	7656.6	9027.44
A0A0G2K1N9	A0A0G2K1N9	A0A0G2K1N9_RAT	Selenoo	Selenoprotein O	1	VEKEDETLVAK	VEKEDETLVAK	3	VEKEDETLVAK3	6799.81	3633.26	4183.81
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	VEKIPGGIIEDSCVLR	VEKIPGGIIEDSC(UniMod:4)VLR	3	VEKIPGGIIEDSC(UniMod:4)VLR3	14292.1	31063.7	24727.3
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	VEKPVVEMDGDEMTR	VEKPVVEMDGDEMTR	2	VEKPVVEMDGDEMTR2	25899.1	30747.1	19223.8
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	VEKPVVEMDGDEMTR	VEKPVVEMDGDEMTR	3	VEKPVVEMDGDEMTR3	76672.3	117327	89932.4
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	VELAAECCR	VELAAEC(UniMod:4)C(UniMod:4)R	2	VELAAEC(UniMod:4)C(UniMod:4)R2	13706	10745.4	6783.04
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	VELAEEDDGEK	VELAEEDDGEK	2	VELAEEDDGEK2	14487.3	10503.6	10036.5
A0A8I6AC38	A0A8I6AC38	A0A8I6AC38_RAT	Wnk2	non-specific serine/threonine protein kinase	1	VELAEEDHGRK	VELAEEDHGRK	3	VELAEEDHGRK3	4432.33	10056.2	
Q5M7A4	Q5M7A4	UBA5_RAT	Uba5	Ubiquitin-like modifier-activating enzyme 5	1	VELANMNR	VELANMNR	2	VELANMNR2	222773	217392	197723
P83732	P83732;M0RBD1	RL24_RAT	Rpl24	Large ribosomal subunit protein eL24	0	VELCSFSGYK	VELC(UniMod:4)SFSGYK	2	VELC(UniMod:4)SFSGYK2	23196.5	19732.9	14235.2
Q5FVM4	Q5FVM4	NONO_RAT	Nono	Non-POU domain-containing octamer-binding protein	1	VELDNMPLR	VELDNMPLR	2	VELDNMPLR2	2782.89	3795.81	5142.62
D3ZEE4	D3ZEE4	D3ZEE4_RAT	Plxdc1	Plexin domain containing 1	1	VELDSSK	VELDSSK	2	VELDSSK2	158001	130531	140872
D3ZTB4	D3ZTB4	D3ZTB4_RAT	Vps11	Vacuolar protein sorting-associated protein 11 homolog	1	VELDTHGCGLR	VELDTHGC(UniMod:4)GLR	3	VELDTHGC(UniMod:4)GLR3	40819.8	30994.9	24816.1
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	VELEDWAGK	VELEDWAGK	2	VELEDWAGK2	59265.4	22860.5	
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	VELEEGHR	VELEEGHR	2	VELEEGHR2	13645.9	8176.14	15924.6
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	VELEEGHRLELAQQQTR	VELEEGHRLELAQQQTR	3	VELEEGHRLELAQQQTR3	8045.86	4595.48	
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	VELEEGHRLELAQQQTR	VELEEGHRLELAQQQTR	4	VELEEGHRLELAQQQTR4	20026.5	17405.7	18128.6
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	VELEMAER	VELEMAER	2	VELEMAER2	34521.4	26610.9	28958.4
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VELEVPQVCTLIMR	VELEVPQVC(UniMod:4)TLIMR	2	VELEVPQVC(UniMod:4)TLIMR2	3.41045e+06	3.53086e+06	3.12462e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VELEVPQVCTLIMR	VELEVPQVC(UniMod:4)TLIMR	3	VELEVPQVC(UniMod:4)TLIMR3	569022	600648	554670
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	VELGEKPVR	VELGEKPVR	2	VELGEKPVR2	40542.2	32306.4	34170.7
Q63471	Q63471	BPIA2_RAT	Bpifa2	BPI fold-containing family A member 2	1	VELGNSNGFTPLNGLLLR	VELGNSNGFTPLNGLLLR	2	VELGNSNGFTPLNGLLLR2	9104.47	10187.5	10040.8
A0A8I5ZQE4	A0A8I5ZQE4	A0A8I5ZQE4_RAT	Supt5h	Transcription elongation factor SPT5	1	VELHSTCQTISVDR	VELHSTC(UniMod:4)QTISVDR	3	VELHSTC(UniMod:4)QTISVDR3	10177.5	12840.6	8744.39
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	VELIDLLAR	VELIDLLAR	2	VELIDLLAR2	33620.5	28183.8	31170.4
P01026	P01026	CO3_RAT	C3	Complement C3	1	VELKPGDNLNVNFHLR	VELKPGDNLNVNFHLR	2	VELKPGDNLNVNFHLR2	32808.6	37786.6	26019.8
P01026	P01026	CO3_RAT	C3	Complement C3	1	VELKPGDNLNVNFHLR	VELKPGDNLNVNFHLR	3	VELKPGDNLNVNFHLR3	367695	348410	275387
P01026	P01026	CO3_RAT	C3	Complement C3	1	VELKPGDNLNVNFHLR	VELKPGDNLNVNFHLR	4	VELKPGDNLNVNFHLR4	2.47064e+06	1.89875e+06	1.76834e+06
P01026	P01026	CO3_RAT	C3	Complement C3	1	VELLHNPAFCSMATAK	VELLHNPAFC(UniMod:4)SMATAK	2	VELLHNPAFC(UniMod:4)SMATAK2	127511	108735	100188
P01026	P01026	CO3_RAT	C3	Complement C3	1	VELLHNPAFCSMATAK	VELLHNPAFC(UniMod:4)SMATAK	3	VELLHNPAFC(UniMod:4)SMATAK3	1.33084e+06	1.2229e+06	1.17209e+06
P38718	P38718	MPC2_RAT	Mpc2	Mitochondrial pyruvate carrier 2	1	VELLLPK	VELLLPK	1	VELLLPK1	5651.14		6061.79
P38718	P38718	MPC2_RAT	Mpc2	Mitochondrial pyruvate carrier 2	1	VELLLPK	VELLLPK	2	VELLLPK2	214904	191964	216731
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	VELLVMK	VELLVMK	2	VELLVMK2	178816	181390	188670
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	VELMPGMR	VELMPGMR	2	VELMPGMR2	988938	1.02705e+06	954818
Q32PX2	Q32PX2	AIMP2_RAT	Aimp2	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2	1	VELPTCMYR	VELPTC(UniMod:4)MYR	2	VELPTC(UniMod:4)MYR2	62565.9	62569.2	51084.2
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	VELPTWEAEAIIQK	VELPTWEAEAIIQK	2	VELPTWEAEAIIQK2	22403.3	18641.7	22967.2
D4A3E8	D4A3E8	D4A3E8_RAT	Mrps27	Mitochondrial ribosomal protein S27	1	VELQCGLR	VELQC(UniMod:4)GLR	2	VELQC(UniMod:4)GLR2	13317.5		14825.3
P31000	P48675;P31000	VIME_RAT	Vim	Vimentin	0	VELQELNDR	VELQELNDR	2	VELQELNDR2	22177.5	13950.6	21475.4
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	VELQHIATDDNLVFTVPEFR	VELQHIATDDNLVFTVPEFR	3	VELQHIATDDNLVFTVPEFR3	4263.71	8310.35	9676.79
Q5PQS4	Q5PQS4	GULP1_RAT	Gulp1	PTB domain-containing engulfment adapter protein 1	1	VELQISIYGVK	VELQISIYGVK	2	VELQISIYGVK2	7322.57	9243.68	
F7EUH5	F7EUH5	F7EUH5_RAT	Plxdc2	Plexin domain containing 2	1	VELQMSK	VELQMSK	1	VELQMSK1	5121.41	2036.66	4290.68
F7EUH5	F7EUH5	F7EUH5_RAT	Plxdc2	Plexin domain containing 2	1	VELQMSK	VELQMSK	2	VELQMSK2	498414	573979	532038
D4ABI7	D4ABI7	D4ABI7_RAT	Hacd3	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase	1	VELSDVQNPAISISENVLHFK	VELSDVQNPAISISENVLHFK	3	VELSDVQNPAISISENVLHFK3	5317.49	10275.5	8316.64
P17078	F1M6G3;P17078;A0A0G2JY60	RL35_RAT	Rpl35	Large ribosomal subunit protein uL29	0	VELSQLR	VELSQLR	2	VELSQLR2	30908.1	30481.3	29243.1
A0A8I6AFZ5	A0A8I6AFZ5	A0A8I6AFZ5_RAT	Srsf7	Serine and arginine rich splicing factor 7	1	VELSTGMPR	VELSTGMPR	2	VELSTGMPR2	36136	23763.1	26103.1
B0BNH1	B0BNH1	B0BNH1_RAT	Gnptg	N-acetylglucosamine-1-phosphate transferase subunit gamma	1	VELTCGK	VELTC(UniMod:4)GK	2	VELTC(UniMod:4)GK2	241386	154223	184759
A0A0G2KB61	A0A0G2KB61	A0A0G2KB61_RAT	Ppp1r13b	Protein phosphatase 1, regulatory subunit 13B	1	VELTLSELQDMAAR	VELTLSELQDMAAR	2	VELTLSELQDMAAR2	4416.3	5430.69	3803.79
A0A8I6A5G9	A0A8I6A5G9	A0A8I6A5G9_RAT	Gm2a	GM2 ganglioside activator	1	VELTVEK	VELTVEK	2	VELTVEK2	11070.6	17012	18455.5
A1L134	A1L134	AUP1_RAT	Aup1	Lipid droplet-regulating VLDL assembly factor AUP1	1	VELVESLK	VELVESLK	2	VELVESLK2	7843.57	9254.03	11561.1
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	VELVHGK	VELVHGK	2	VELVHGK2	64835.3	55318.3	53744
Q6PDU7	Q6PDU7	ATP5L_RAT	Atp5mg	ATP synthase subunit g, mitochondrial	1	VELVPPTLGEIPTAIQSMK	VELVPPTLGEIPTAIQSMK	3	VELVPPTLGEIPTAIQSMK3	153041	155798	181588
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	VEMALEALR	VEMALEALR	2	VEMALEALR2	22808.4	24365.9	24427.2
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	VEMDEQIK	VEMDEQIK	2	VEMDEQIK2	14693.3	11079.5	8716.24
P70567	P70567	TMOD1_RAT	Tmod1	Tropomodulin-1	1	VEMEIVNMLEK	VEMEIVNMLEK	2	VEMEIVNMLEK2	8846.36	4072.29	7940.82
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	VEMVMAPSQK	VEMVMAPSQK	2	VEMVMAPSQK2	10309.8	10071	4613.08
Q9JHB5	Q9JHB5	TSNAX_RAT	Tsnax	Translin-associated protein X	1	VENACYALK	VENAC(UniMod:4)YALK	2	VENAC(UniMod:4)YALK2	6368.91	8818.54	10919
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	VENALNSIDAESNQEK	VENALNSIDAESNQEK	2	VENALNSIDAESNQEK2	15474.9	11576.4	13751.1
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	VENDPHFIIYLPK	VENDPHFIIYLPK	3	VENDPHFIIYLPK3	38285.4	36138.1	35756
Q91Y81	Q91Y81	SEPT2_RAT	Septin2	Septin-2	1	VENEDMNK	VENEDMNK	2	VENEDMNK2			28674.8
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	VENFEAYFK	VENFEAYFK	2	VENFEAYFK2	206726	206287	230916
P16446	P16446	PIPNA_RAT	Pitpna	Phosphatidylinositol transfer protein alpha isoform	1	VENFIHK	VENFIHK	2	VENFIHK2	8432.86		11077.9
P53812	P53812	PIPNB_RAT	Pitpnb	Phosphatidylinositol transfer protein beta isoform	1	VENFIQK	VENFIQK	2	VENFIQK2	19534	13602.7	20382
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	VENGDGIYLKPVYK	VENGDGIYLKPVYK	2	VENGDGIYLKPVYK2	14067	6732.08	8150.12
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	VENGDGIYLKPVYK	VENGDGIYLKPVYK	3	VENGDGIYLKPVYK3	200918	173116	166263
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	VENGFLEHTTGR	VENGFLEHTTGR	2	VENGFLEHTTGR2	6612.49	4039.19	2882.65
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	VENGFLEHTTGR	VENGFLEHTTGR	3	VENGFLEHTTGR3	86358.5	79306.9	61433.1
O54857	O54857	PTEN_RAT	Pten	Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN	1	VENGSLCDQEIDSICSIER	VENGSLC(UniMod:4)DQEIDSIC(UniMod:4)SIER	3	VENGSLC(UniMod:4)DQEIDSIC(UniMod:4)SIER3	7132.19		4880.73
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VENGVQACHPTGCGHCLANGGVHYVTLDGR	VENGVQAC(UniMod:4)HPTGC(UniMod:4)GHC(UniMod:4)LANGGVHYVTLDGR	4	VENGVQAC(UniMod:4)HPTGC(UniMod:4)GHC(UniMod:4)LANGGVHYVTLDGR4	4536.49	5326.59	5088.83
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	VENILLHDR	VENILLHDR	2	VENILLHDR2	22788.6	10388.1	12485.6
A0A8I6GK59	A0A8I6GK59	A0A8I6GK59_RAT	Bmp2k	BMP-2 inducible kinase	1	VENILLNDAGNYVLCDFGSATNK	VENILLNDAGNYVLC(UniMod:4)DFGSATNK	3	VENILLNDAGNYVLC(UniMod:4)DFGSATNK3	4933.57	6274.45	5987.83
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	VENLLLEAEK	VENLLLEAEK	2	VENLLLEAEK2	91863.1	100750	68493.6
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	VENLLLEAEKR	VENLLLEAEKR	2	VENLLLEAEKR2	15288.6	12713.4	10919.9
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	VENLLLEAEKR	VENLLLEAEKR	3	VENLLLEAEKR3	95205	145541	116611
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	VENLLLSNQGTIK	VENLLLSNQGTIK	2	VENLLLSNQGTIK2	52505.7	46897.8	45292.4
B5DFE0	B5DFE0	B5DFE0_RAT	Pals2	Membrane palmitoylated protein 6	1	VENNDLVIAR	VENNDLVIAR	2	VENNDLVIAR2	5858.76		4012.29
Q5BK57	Q5BK57	HAUS8_RAT	Haus8	HAUS augmin-like complex subunit 8	1	VENNLALLEEK	VENNLALLEEK	2	VENNLALLEEK2	11383.9	9227	6621.56
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	VENQENVSNLVIDDTELK	VENQENVSNLVIDDTELK	3	VENQENVSNLVIDDTELK3	221881	194852	197960
P86411	P86411	RGPA2_RAT	Ralgapa2	Ral GTPase-activating protein subunit alpha-2	1	VENSQNLSSSEPK	VENSQNLSSSEPK	2	VENSQNLSSSEPK2	1802.37		2368.47
P70645	P70645	BLMH_RAT	Blmh	Bleomycin hydrolase	1	VENSWGEDHGHK	VENSWGEDHGHK	2	VENSWGEDHGHK2	8090.91		2071.26
P70645	P70645	BLMH_RAT	Blmh	Bleomycin hydrolase	1	VENSWGEDHGHK	VENSWGEDHGHK	3	VENSWGEDHGHK3	20062.4		14599.2
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VEPAVIEAQNAVK	VEPAVIEAQNAVK	2	VEPAVIEAQNAVK2	377500	519969	459413
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VEPAVIEAQNAVK	VEPAVIEAQNAVK	3	VEPAVIEAQNAVK3	17765.5	20730.6	24916.4
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	VEPAVSSIVNSIQVLASK	VEPAVSSIVNSIQVLASK	2	VEPAVSSIVNSIQVLASK2	49853.7	41582.1	50396.4
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	VEPAVSSIVNSIQVLASK	VEPAVSSIVNSIQVLASK	3	VEPAVSSIVNSIQVLASK3	10219.3	13784.2	11596
A0A8I5ZRU2	A0A8I5ZRU2	A0A8I5ZRU2_RAT	ENSRNOG00000063550	Ig-like domain-containing protein	1	VEPEDLGVYYCLQR	VEPEDLGVYYC(UniMod:4)LQR	2	VEPEDLGVYYC(UniMod:4)LQR2	113419	90004	115126
A0A8I5ZRU2	A0A8I5ZRU2	A0A8I5ZRU2_RAT	ENSRNOG00000063550	Ig-like domain-containing protein	1	VEPEDLGVYYCLQR	VEPEDLGVYYC(UniMod:4)LQR	3	VEPEDLGVYYC(UniMod:4)LQR3	30304.9	33383.6	26622.7
A0A0G2JUV4	A0A0G2JUV4	A0A0G2JUV4_RAT	Mrpl1	Mitochondrial ribosomal protein L1	1	VEPFASVIALPHPFSSEVNK	VEPFASVIALPHPFSSEVNK	3	VEPFASVIALPHPFSSEVNK3	7141.17		
P49088	P49088	ASNS_RAT	Asns	Asparagine synthetase [glutamine-hydrolyzing]	1	VEPFLPGHYEVLDLKPNGK	VEPFLPGHYEVLDLKPNGK	3	VEPFLPGHYEVLDLKPNGK3	12374.3		
P49088	P49088	ASNS_RAT	Asns	Asparagine synthetase [glutamine-hydrolyzing]	1	VEPFLPGHYEVLDLKPNGK	VEPFLPGHYEVLDLKPNGK	4	VEPFLPGHYEVLDLKPNGK4	29856.6	1720.81	4209.78
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	VEPFTSLHVQLQSGR	VEPFTSLHVQLQSGR	2	VEPFTSLHVQLQSGR2		9664.82	
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	VEPFTSLHVQLQSGR	VEPFTSLHVQLQSGR	3	VEPFTSLHVQLQSGR3	116250	122629	124280
A0A8I6AZI9	A0A8I6AZI9	A0A8I6AZI9_RAT	Ubash3a	Ubiquitin associated and SH3 domain containing, A	1	VEPGIFEWMK	VEPGIFEWMK	2	VEPGIFEWMK2	16580.2	11634.5	16991.7
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	VEPGLFEWTK	VEPGLFEWTK	2	VEPGLFEWTK2	174048	150836	296477
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VEPGLGADNSVVR	VEPGLGADNSVVR	2	VEPGLGADNSVVR2	1.7664e+07	1.73715e+07	1.98444e+07
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VEPGLGADNSVVR	VEPGLGADNSVVR	3	VEPGLGADNSVVR3	8497.89	8761.26	11249.4
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	VEPGMAPVAK	VEPGMAPVAK	2	VEPGMAPVAK2	3.88057e+07	3.56114e+07	3.37233e+07
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	VEPHSTTYR	VEPHSTTYR	2	VEPHSTTYR2			36166.8
Q641X3	Q641X3	HEXA_RAT	Hexa	Beta-hexosaminidase subunit alpha	1	VEPLAFR	VEPLAFR	2	VEPLAFR2	109771	104999	100848
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VEPLRNELQK	VEPLRNELQK	2	VEPLRNELQK2	10936.9	14317.2	
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VEPLRNELQK	VEPLRNELQK	3	VEPLRNELQK3	258644	314398	283756
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	VEPNLDAALYWPVNQK	VEPNLDAALYWPVNQK	2	VEPNLDAALYWPVNQK2	69367.1	66814.8	59090.2
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	VEPNLDAALYWPVNQK	VEPNLDAALYWPVNQK	3	VEPNLDAALYWPVNQK3	27425	19313	32156.2
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	VEPPKEEPK	VEPPKEEPK	2	VEPPKEEPK2	281589	315069	307671
Q64232	Q64232	TECR_RAT	Tecr	Very-long-chain enoyl-CoA reductase	1	VEPQATISEIK	VEPQATISEIK	2	VEPQATISEIK2	941750	1.02956e+06	1.03758e+06
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	VEPQLAEDQPVHGDLDLVMNLMDAHK	VEPQLAEDQPVHGDLDLVMNLMDAHK	4	VEPQLAEDQPVHGDLDLVMNLMDAHK4	13310.6	20746	16752.5
Q811U3	Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	1	VEPSSQSPGR	VEPSSQSPGR	2	VEPSSQSPGR2			6683.14
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	VEPTVDTSGIK	VEPTVDTSGIK	2	VEPTVDTSGIK2	20109.1	29074.2	17090.9
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	VEPVDASGTEK	VEPVDASGTEK	2	VEPVDASGTEK2	384699	372753	356523
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	VEPVDRSKLLTVWLPDSLTTWEIHGVSLSK	VEPVDRSKLLTVWLPDSLTTWEIHGVSLSK	4	VEPVDRSKLLTVWLPDSLTTWEIHGVSLSK4	24572.1	16732.1	20157.6
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	VEPVGHAPLLALVHK	VEPVGHAPLLALVHK	4	VEPVGHAPLLALVHK4	3294.13	10453.4	6380.94
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	VEPYSSTAQVQFDEPEATGGVPILK	VEPYSSTAQVQFDEPEATGGVPILK	3	VEPYSSTAQVQFDEPEATGGVPILK3	129097	120970	148276
A0A8I6AD03	A0A8I6AD03	A0A8I6AD03_RAT	Aplp1	Amyloid beta precursor like protein 1	1	VEQAAQAIPMER	VEQAAQAIPMER	2	VEQAAQAIPMER2	54680.6	46483.4	48493.4
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	VEQALSEVASSLQSSAPK	VEQALSEVASSLQSSAPK	2	VEQALSEVASSLQSSAPK2	6150.81	2375.96	4122.52
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	VEQALSEVASSLQSSAPK	VEQALSEVASSLQSSAPK	3	VEQALSEVASSLQSSAPK3	11964.4	14560.8	5944.48
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	VEQDLAMGTDAEGEK	VEQDLAMGTDAEGEK	2	VEQDLAMGTDAEGEK2	10155.2	8475.64	12094.1
D3ZV82	D3ZV82;A0A8I5ZTR2	D3ZV82_RAT	Gbp7	Similar to guanylate binding protein family, member 6	0	VEQDYEQVPR	VEQDYEQVPR	2	VEQDYEQVPR2	2124.59	2565.99	
Q63470	Q63470	DYR1A_RAT	Dyrk1a	Dual specificity tyrosine-phosphorylation-regulated kinase 1A	1	VEQEWVAIK	VEQEWVAIK	2	VEQEWVAIK2	11000.6	5088.58	5842.81
A0A8I6A182	A0A8I6A182	A0A8I6A182_RAT	Pitpnc1	Phosphatidylinositol transfer protein, cytoplasmic 1	1	VEQFVHK	VEQFVHK	2	VEQFVHK2	3701.41	4753.67	4391.13
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	VEQGNQELLDQAAMEEATTNEAK	VEQGNQELLDQAAMEEATTNEAK	3	VEQGNQELLDQAAMEEATTNEAK3		6985.53	9063
Q6AYT3	Q6AYT3;A0A8I5YBA4	RTCB_RAT	Rtcb	RNA-splicing ligase RtcB homolog	0	VEQHVVDGK	VEQHVVDGK	2	VEQHVVDGK2			2440.73
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	VEQIAAIAQELNELDYYDSHNVNTR	VEQIAAIAQELNELDYYDSHNVNTR	3	VEQIAAIAQELNELDYYDSHNVNTR3	95826.8	86999.4	95457.9
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	VEQIAAIAQELNELDYYDSHNVNTR	VEQIAAIAQELNELDYYDSHNVNTR	4	VEQIAAIAQELNELDYYDSHNVNTR4	17983.1	15361.8	21314.8
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	VEQIAAIAQELNELDYYDSPSVNAR	VEQIAAIAQELNELDYYDSPSVNAR	3	VEQIAAIAQELNELDYYDSPSVNAR3	56764.9	48516.2	47562
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	VEQIAAIAQELNELDYYDSPSVNAR	VEQIAAIAQELNELDYYDSPSVNAR	4	VEQIAAIAQELNELDYYDSPSVNAR4	11741.8	24215.5	11462.5
Q3B8Q0	Q3B8Q0	MARE2_RAT	Mapre2	Microtubule-associated protein RP/EB family member 2	1	VEQLCSGAAYCQFMDMLFPGCISLK	VEQLC(UniMod:4)SGAAYC(UniMod:4)QFMDMLFPGC(UniMod:4)ISLK	3	VEQLC(UniMod:4)SGAAYC(UniMod:4)QFMDMLFPGC(UniMod:4)ISLK3	4621.32	3697.54	
Q6AY49	Q6AY49	Q6AY49_RAT	Tusc3	Tumor suppressor candidate 3	1	VEQLMEWSSR	VEQLMEWSSR	2	VEQLMEWSSR2	21853.2	23575.6	16403.4
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	VEQLPSGLEHDNLEAQCPEQPCR	VEQLPSGLEHDNLEAQC(UniMod:4)PEQPC(UniMod:4)R	3	VEQLPSGLEHDNLEAQC(UniMod:4)PEQPC(UniMod:4)R3	73139	79992.2	75421.4
P17246	P17246	TGFB1_RAT	Tgfb1	Transforming growth factor beta-1 proprotein	1	VEQLSNMIVR	VEQLSNMIVR	2	VEQLSNMIVR2	1.07447e+06	1.0763e+06	1.10382e+06
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	VEQMFQILLDPK	VEQMFQILLDPK	2	VEQMFQILLDPK2	7985.72	8095.85	13091.1
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	VEQTAFSFLR	VEQTAFSFLR	2	VEQTAFSFLR2	17432.4	17895.5	18388.8
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	VEQVGDMIDR	VEQVGDMIDR	2	VEQVGDMIDR2	3700.23		11871.8
Q9Z269	Q9Z269	VAPB_RAT	Vapb	Vesicle-associated membrane protein-associated protein B	1	VEQVLSLEPQHELK	VEQVLSLEPQHELK	2	VEQVLSLEPQHELK2	31109	17980.9	30894.9
Q9Z269	Q9Z269	VAPB_RAT	Vapb	Vesicle-associated membrane protein-associated protein B	1	VEQVLSLEPQHELK	VEQVLSLEPQHELK	3	VEQVLSLEPQHELK3	76121.6	60594.6	97959.9
Q9JI03	Q9JI03	CO5A1_RAT	Col5a1	Collagen alpha-1(V) chain	1	VEQVPIVDIMFTDFGEASQK	VEQVPIVDIMFTDFGEASQK	3	VEQVPIVDIMFTDFGEASQK3	6521.9	9409.13	11168.9
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	VEREDVVFLYLIEMDSQLPGK	VEREDVVFLYLIEMDSQLPGK	3	VEREDVVFLYLIEMDSQLPGK3	10998.4	5489.28	4496.21
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	VERKPPDAGGCVHGDGDMGVLCPTGCELR	VERKPPDAGGC(UniMod:4)VHGDGDMGVLC(UniMod:4)PTGC(UniMod:4)ELR	4	VERKPPDAGGC(UniMod:4)VHGDGDMGVLC(UniMod:4)PTGC(UniMod:4)ELR4	21369.4	25545.3	28005.2
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	VERPDSEASKPPHPSLLSC	VERPDSEASKPPHPSLLSC(UniMod:4)	3	VERPDSEASKPPHPSLLSC(UniMod:4)3	6597.46	7237.91	13892.4
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	VERPDSEASKPPHPSLLSC	VERPDSEASKPPHPSLLSC(UniMod:4)	4	VERPDSEASKPPHPSLLSC(UniMod:4)4	37268.4	38378.8	20763.3
A0A8I5ZV26	A0A8I5ZV26	A0A8I5ZV26_RAT	Stom	Stomatin	1	VERVEIK	VERVEIK	2	VERVEIK2	5592.25	10892.9	12142.4
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	VESALIKPINPR	VESALIKPINPR	2	VESALIKPINPR2	2.08801e+06	1.40397e+06	1.5301e+06
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	VESALIKPINPR	VESALIKPINPR	3	VESALIKPINPR3	40887.7	50662.9	30169.3
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	VESDLGPK	VESDLGPK	2	VESDLGPK2	165367	174693	162803
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	VESEENGEAHSQNDALR	VESEENGEAHSQNDALR	3	VESEENGEAHSQNDALR3	3884.01		
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	VESEQHGDRLPR	VESEQHGDRLPR	3	VESEQHGDRLPR3	23697.7	23497.5	25551.5
F1LTX4	F1LTX4	F1LTX4_RAT	Lrrn4	Leucine rich repeat neuronal 4	1	VESEWIR	VESEWIR	2	VESEWIR2	64014.8	111768	69776.5
Q9JMB3	Q9JMB3	Q9JMB3_RAT	Epb41l3	Erythrocyte membrane protein band 4.1-like 3	1	VESISVGSVSPGGVK	VESISVGSVSPGGVK	2	VESISVGSVSPGGVK2	14084.7	14008.6	7873.84
D3Z8E6	D3Z8E6	CAMP1_RAT	Camsap1	Calmodulin-regulated spectrin-associated protein 1	1	VESLEALPILSR	VESLEALPILSR	2	VESLEALPILSR2		3577.62	4531.59
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	VESLEQEAANER	VESLEQEAANER	2	VESLEQEAANER2	93010	139074	156732
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	VESLEQEAANER	VESLEQEAANER	3	VESLEQEAANER3			13986.6
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	VESLESQTR	VESLESQTR	2	VESLESQTR2	77142.5	104760	71050.3
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	VESLIAQK	VESLIAQK	2	VESLIAQK2	79608.8	90578.7	92318.9
Q498T9	Q498T9	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	1	VESLPDELYFCK	VESLPDELYFC(UniMod:4)K	2	VESLPDELYFC(UniMod:4)K2	22491.4	15589	16094.1
Q923V4	Q923V4	FBX6_RAT	Fbxo6	F-box only protein 6	1	VESLPGDHGTSFPDTK	VESLPGDHGTSFPDTK	2	VESLPGDHGTSFPDTK2	5713.48	4981.11	
Q923V4	Q923V4	FBX6_RAT	Fbxo6	F-box only protein 6	1	VESLPGDHGTSFPDTK	VESLPGDHGTSFPDTK	3	VESLPGDHGTSFPDTK3	165438	175414	168427
P31000	P31000	VIME_RAT	Vim	Vimentin	1	VESLQEEIAFLK	VESLQEEIAFLK	2	VESLQEEIAFLK2	11084.1	9613.7	6998.94
P31000	P31000	VIME_RAT	Vim	Vimentin	1	VESLQEEIAFLKK	VESLQEEIAFLKK	3	VESLQEEIAFLKK3	5231.37	2732.53	1768.34
D4A7H9	D4A7H9	D4A7H9_RAT	Chmp7	Charged multivesicular body protein 7	1	VESLSQESER	VESLSQESER	2	VESLSQESER2	21064.6	9479.09	8477.88
Q6AYF8	Q6AYF8	Q6AYF8_RAT	Serpinb9	Serpin family B member 9	1	VESNLTFEK	VESNLTFEK	2	VESNLTFEK2	34351.4	34120.6	35367.8
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	VESPVIFDLEDLDTETDGSK	VESPVIFDLEDLDTETDGSK	3	VESPVIFDLEDLDTETDGSK3	3907.53	9605.07	4801.15
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VESQHVGSSILTAEGR	VESQHVGSSILTAEGR	2	VESQHVGSSILTAEGR2	84826.7	135885	88058.8
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VESQHVGSSILTAEGR	VESQHVGSSILTAEGR	3	VESQHVGSSILTAEGR3	1.41501e+06	1.9326e+06	1.79177e+06
A4V8B4	A4V8B4	SAV1_RAT	Sav1	Protein salvador homolog 1	1	VESSEFGTYYVDHTNK	VESSEFGTYYVDHTNK	2	VESSEFGTYYVDHTNK2	458.717		2286.63
A4V8B4	A4V8B4	SAV1_RAT	Sav1	Protein salvador homolog 1	1	VESSEFGTYYVDHTNK	VESSEFGTYYVDHTNK	3	VESSEFGTYYVDHTNK3	22196.1	21753.8	34293.6
A4V8B4	A4V8B4	SAV1_RAT	Sav1	Protein salvador homolog 1	1	VESSEFGTYYVDHTNKR	VESSEFGTYYVDHTNKR	4	VESSEFGTYYVDHTNKR4	11688.9	17028.4	8253.78
Q6Y1S1	Q6Y1S1	MYD88_RAT	Myd88	Myeloid differentiation primary response protein MyD88	1	VESSVPQTK	VESSVPQTK	2	VESSVPQTK2		17802.5	
P28064	P28064	PSB8_RAT	Psmb8	Proteasome subunit beta type-8	1	VESTDVSDLLHK	VESTDVSDLLHK	2	VESTDVSDLLHK2	275403	257997	265782
P28064	P28064	PSB8_RAT	Psmb8	Proteasome subunit beta type-8	1	VESTDVSDLLHK	VESTDVSDLLHK	3	VESTDVSDLLHK3	1.57249e+06	1.59391e+06	1.64498e+06
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	VESTEQLIEIASR	VESTEQLIEIASR	2	VESTEQLIEIASR2	17650.7	13644.5	33667.1
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	VESTEQLIEIASR	VESTEQLIEIASR	3	VESTEQLIEIASR3	2808.17	6365.75	3395.13
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	VESVFETLVEDSPEEESTLTK	VESVFETLVEDSPEEESTLTK	3	VESVFETLVEDSPEEESTLTK3	54821	68817.8	59953.5
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	VESVGLMTGSGVVGVK	VESVGLMTGSGVVGVK	2	VESVGLMTGSGVVGVK2	24163.8	22950.1	11887.2
Q8VHE9	Q8VHE9	RETST_RAT	Retsat	All-trans-retinol 13,14-reductase	1	VESVTGGSPLTNQYYLAAHR	VESVTGGSPLTNQYYLAAHR	3	VESVTGGSPLTNQYYLAAHR3	18242.5	24737.8	18637.4
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	VETATIYYLVLDVVESDCWVLSTK	VETATIYYLVLDVVESDC(UniMod:4)WVLSTK	3	VETATIYYLVLDVVESDC(UniMod:4)WVLSTK3		6439.17	8503.28
A0A8I6ANL9	A0A8I6ANL9	A0A8I6ANL9_RAT	Cdc23	Cell division cycle 23	1	VETCCVIGNYYSLR	VETC(UniMod:4)C(UniMod:4)VIGNYYSLR	2	VETC(UniMod:4)C(UniMod:4)VIGNYYSLR2	12651.8	17203.5	9235.51
E9PU42	E9PU42	E9PU42_RAT	Vps26c	VPS26 endosomal protein sorting factor C	1	VETCGCAEGYAR	VETC(UniMod:4)GC(UniMod:4)AEGYAR	2	VETC(UniMod:4)GC(UniMod:4)AEGYAR2	6428.48	5044.59	2727.73
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	VETDHIVTAVGLEPNVELAK	VETDHIVTAVGLEPNVELAK	3	VETDHIVTAVGLEPNVELAK3	83619.5	78727.1	79989.6
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	VETEDQVLATFCGR	VETEDQVLATFC(UniMod:4)GR	2	VETEDQVLATFC(UniMod:4)GR2	1.19228e+06	122671	125093
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	VETEDQVLATFCGR	VETEDQVLATFC(UniMod:4)GR	3	VETEDQVLATFC(UniMod:4)GR3	216183	227166	227416
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	VETEEGIGHDFR	VETEEGIGHDFR	2	VETEEGIGHDFR2	4188.54	3909.42	
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	VETEEGIGHDFR	VETEEGIGHDFR	3	VETEEGIGHDFR3	28712.8	44513.8	28668.6
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	VETETAGTETLGVHR	VETETAGTETLGVHR	2	VETETAGTETLGVHR2	2298.62	1194.33	
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	VETETAGTETLGVHR	VETETAGTETLGVHR	3	VETETAGTETLGVHR3	28470.5	20957.1	19814.7
Q6QBQ4	Q6QBQ4	PLS3_RAT	Plscr3	Phospholipid scramblase 3	1	VETFLGWETCNR	VETFLGWETC(UniMod:4)NR	2	VETFLGWETC(UniMod:4)NR2	9682.07	9099.34	11314.9
P62083	P62083;A0A8I6GEL5	RS7_RAT	Rps7	Small ribosomal subunit protein eS7	0	VETFSGVYK	VETFSGVYK	2	VETFSGVYK2	29265.3	23182.7	18746.3
P62630	P62630;F1M6C2;M0R757	EF1A1_RAT	Eef1a1	Elongation factor 1-alpha 1	0	VETGVLKPGMVVTFAPVNVTTEVK	VETGVLKPGMVVTFAPVNVTTEVK	3	VETGVLKPGMVVTFAPVNVTTEVK3	182071	154939	141221
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	VETIGDAYCVAGGLHR	VETIGDAYC(UniMod:4)VAGGLHR	2	VETIGDAYC(UniMod:4)VAGGLHR2	10896.9	8955.24	6323.83
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	VETIGDAYCVAGGLHR	VETIGDAYC(UniMod:4)VAGGLHR	3	VETIGDAYC(UniMod:4)VAGGLHR3	89984.5	106188	119288
F1LRE5	F1LRE5	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	1	VETLKDTTNSMVESIK	VETLKDTTNSMVESIK	3	VETLKDTTNSMVESIK3	3814.06	3639.78	6882.08
D3ZFJ3	D3ZFJ3	3BP1_RAT	Sh3bp1	SH3 domain-binding protein 1	1	VETLKEDEEELK	VETLKEDEEELK	3	VETLKEDEEELK3	21914.8		19923.4
A0A8I6AS17	A0A8I6AS17	A0A8I6AS17_RAT	Bsdc1	BSD domain containing 1	1	VETLREEVPTDLR	VETLREEVPTDLR	3	VETLREEVPTDLR3	69737.5	79118.3	93073.8
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	VETLSQVEVILQQSAADIAR	VETLSQVEVILQQSAADIAR	3	VETLSQVEVILQQSAADIAR3	15719	15934.7	18893.1
Q4V8B7	Q4V8B7	HSDL1_RAT	Hsdl1	Inactive hydroxysteroid dehydrogenase-like protein 1	1	VETLVLVADFSR	VETLVLVADFSR	2	VETLVLVADFSR2	96777.9	95268	95681.7
Q5XIN7	Q5XIN7	PMGT1_RAT	Pomgnt1	Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1	1	VETMPGLGWVLR	VETMPGLGWVLR	2	VETMPGLGWVLR2	9691.55	6772.93	9114.86
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	VETPLEEAIK	VETPLEEAIK	2	VETPLEEAIK2	46742	60636.6	45323.1
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	VETPLHMAAR	VETPLHMAAR	2	VETPLHMAAR2	4034.26		
O70436	P84025;O54835;O70436	SMAD2_RAT	Smad2	Mothers against decapentaplegic homolog 2	0	VETPVLPPVLVPR	VETPVLPPVLVPR	2	VETPVLPPVLVPR2	16760.5	19166.7	12013.7
D3ZZL9	D3ZZL9	GCC2_RAT	Gcc2	GRIP and coiled-coil domain-containing protein 2	1	VETQLFQLK	VETQLFQLK	2	VETQLFQLK2	7275.75	4051.11	
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	VETQPEVQLPGPAPNIR	VETQPEVQLPGPAPNIR	2	VETQPEVQLPGPAPNIR2	75239.4	63568.3	62220.7
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	VETQPEVQLPGPAPNIR	VETQPEVQLPGPAPNIR	3	VETQPEVQLPGPAPNIR3	54141.2	47345.9	50862.9
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	VETSDEEIK	VETSDEEIK	2	VETSDEEIK2	56096.3	54791.8	60125.2
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	VETSDEEIKDLHQR	VETSDEEIKDLHQR	3	VETSDEEIKDLHQR3	16481.2	11223.1	18605.4
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	VETSDEEIKDLHQR	VETSDEEIKDLHQR	4	VETSDEEIKDLHQR4	12004.7	6723.62	15281.1
Q68FU3	Q68FU3	ETFB_RAT	Etfb	Electron transfer flavoprotein subunit beta	1	VETTEDLVAK	VETTEDLVAK	2	VETTEDLVAK2	173386	132519	187051
F7FE56	F7FE56	F7FE56_RAT	Tpd52l1	TPD52 like 1	1	VETTVTSLK	VETTVTSLK	2	VETTVTSLK2	148338	124483	130903
A0A8I6AEZ7	A0A8I6AEZ7	A0A8I6AEZ7_RAT	Crlf3	Cytokine receptor-like factor 3	1	VETVGQPDR	VETVGQPDR	2	VETVGQPDR2	78297.7	73170.5	65886.5
A0A8I6AEZ7	A0A8I6AEZ7	A0A8I6AEZ7_RAT	Crlf3	Cytokine receptor-like factor 3	1	VETVGQPDRR	VETVGQPDRR	2	VETVGQPDRR2	18440.9	16720	21929.1
A0A8I6AEZ7	A0A8I6AEZ7	A0A8I6AEZ7_RAT	Crlf3	Cytokine receptor-like factor 3	1	VETVGQPDRR	VETVGQPDRR	3	VETVGQPDRR3	441250	492533	530854
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	VETVSQTLR	VETVSQTLR	2	VETVSQTLR2	6674.43	4918.44	4302.64
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	VETWDVK	VETWDVK	2	VETWDVK2	204087	215594	191164
A0A8I6ANR6	A0A8I6ANR6	A0A8I6ANR6_RAT	Chuk	IkappaB kinase	1	VEVALSNIK	VEVALSNIK	2	VEVALSNIK2	19733.4	22265	16332.6
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	VEVCCFDK	VEVC(UniMod:4)C(UniMod:4)FDK	2	VEVC(UniMod:4)C(UniMod:4)FDK2	17460.5	16627.6	24166.8
D3ZUV2	D3ZUV2	D3ZUV2_RAT	Mib1	RING-type E3 ubiquitin transferase	1	VEVCGTSWTYNPAAVSK	VEVC(UniMod:4)GTSWTYNPAAVSK	2	VEVC(UniMod:4)GTSWTYNPAAVSK2	1656.4	2580.48	
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	VEVDEKPGPADR	VEVDEKPGPADR	3	VEVDEKPGPADR3	95963.1	96184.1	80505.5
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	VEVDEKPGPADRK	VEVDEKPGPADRK	3	VEVDEKPGPADRK3	11222.1	21457.6	26352.9
Q68FS8	Q68FS8	Q68FS8_RAT	Rtca	RNA 3'-terminal-phosphate cyclase (ATP)	1	VEVDGGIMEGGGQILR	VEVDGGIMEGGGQILR	2	VEVDGGIMEGGGQILR2	10456.8	8849.34	23784.8
Q9QUL6	Q56A18;Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	0	VEVDMEK	VEVDMEK	2	VEVDMEK2	129320	121498	111519
A0A8I6A5U2	A0A8I5ZVZ1;Q6AYU3;A0A8I6A5U2;A0A8I5ZLJ4	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	0	VEVEEDGQLK	VEVEEDGQLK	2	VEVEEDGQLK2	313218	242027	263960
A0A8I5ZU29	A0A8I5ZU29;A0A8L2UM24;B4F777	A0A8I5ZU29_RAT	LOC120097335	High mobility group nucleosome-binding domain-containing protein 5-like	0	VEVEEEADNK	VEVEEEADNK	2	VEVEEEADNK2	23443.9	18109.4	14324.9
P97531	P97531	CIP4_RAT	Trip10	Cdc42-interacting protein 4	1	VEVEQSYAK	VEVEQSYAK	2	VEVEQSYAK2	15667.1	14052.6	16459.4
P31000	P31000	VIME_RAT	Vim	Vimentin	1	VEVERDNLAEDIMR	VEVERDNLAEDIMR	3	VEVERDNLAEDIMR3	14487.3	17692	16569.9
Q3B8N7	Q3B8N7	T22D4_RAT	Tsc22d4	TSC22 domain family protein 4	1	VEVESGGLAAGTPPLSR	VEVESGGLAAGTPPLSR	2	VEVESGGLAAGTPPLSR2	24932.2	22587.7	30749.3
Q3B8N7	Q3B8N7	T22D4_RAT	Tsc22d4	TSC22 domain family protein 4	1	VEVESGGLAAGTPPLSR	VEVESGGLAAGTPPLSR	3	VEVESGGLAAGTPPLSR3	11575.5	3937.07	5140.1
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	VEVFEHAVNNTAGDDLAK	VEVFEHAVNNTAGDDLAK	3	VEVFEHAVNNTAGDDLAK3	15889.3	19259.3	10973
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	VEVGTEVTDYR	VEVGTEVTDYR	2	VEVGTEVTDYR2	8464.5	4536.21	2571.23
Q9QWE9	Q9QWE9	GGT5_RAT	Ggt5	Glutathione hydrolase 5 proenzyme	1	VEVINAR	VEVINAR	2	VEVINAR2	131018	148010	134226
A0A8I6A4C2	A0A8I6A4C2	A0A8I6A4C2_RAT	Nxn	Nucleoredoxin	1	VEVLNDEDCR	VEVLNDEDC(UniMod:4)R	2	VEVLNDEDC(UniMod:4)R2	1644.05		3243.11
Q498T9	Q498T9	LRC8C_RAT	Lrrc8c	Volume-regulated anion channel subunit LRRC8C	1	VEVLPSHLFLCNK	VEVLPSHLFLC(UniMod:4)NK	3	VEVLPSHLFLC(UniMod:4)NK3	23132.5	36220.5	37485.5
Q5XIP1	Q5XIP1	PELO_RAT	Pelo	Protein pelota homolog	1	VEVNIPR	VEVNIPR	2	VEVNIPR2	151962	151635	163828
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	VEVPEDFGVGLEIASYTAR	VEVPEDFGVGLEIASYTAR	3	VEVPEDFGVGLEIASYTAR3	19022.4	10087.9	8823.63
P07092	P07092	GDN_RAT	Serpine2	Glia-derived nexin	1	VEVPFAAR	VEVPFAAR	2	VEVPFAAR2	378222	381798	409617
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	VEVQEEEMSTK	VEVQEEEMSTK	2	VEVQEEEMSTK2	31495.4	49723.5	35269.7
D3ZP82	D3ZP82	D3ZP82_RAT	Loxl3	Lysyl oxidase homolog	1	VEVQIGVPGHLR	VEVQIGVPGHLR	3	VEVQIGVPGHLR3	19880.8	11189.4	18645.3
P62483	P62483	KCAB2_RAT	Kcnab2	Voltage-gated potassium channel subunit beta-2	1	VEVQLPELFHK	VEVQLPELFHK	2	VEVQLPELFHK2	12731.5	7460.75	
P62483	P62483	KCAB2_RAT	Kcnab2	Voltage-gated potassium channel subunit beta-2	1	VEVQLPELFHK	VEVQLPELFHK	3	VEVQLPELFHK3	56517.7	39505.4	63196.9
P63144	P63144	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	1	VEVQLPELYHK	VEVQLPELYHK	2	VEVQLPELYHK2	21804.2	17398	13575
P63144	P63144	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	1	VEVQLPELYHK	VEVQLPELYHK	3	VEVQLPELYHK3	77835.8	76805.7	67868.6
Q01205	Q01205	ODO2_RAT	Dlst	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial	1	VEVRPMMYVALTYDHR	VEVRPMMYVALTYDHR	3	VEVRPMMYVALTYDHR3		34894.2	
Q01205	Q01205	ODO2_RAT	Dlst	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial	1	VEVRPMMYVALTYDHR	VEVRPMMYVALTYDHR	4	VEVRPMMYVALTYDHR4	43515.1	28354.7	40422.1
A0A0G2K8Z9	D3ZM20;A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	0	VEVSYMEIYNEK	VEVSYMEIYNEK	2	VEVSYMEIYNEK2	2952.57	6626.75	4341.13
Q63945	Q63945;Q6QI56	SET_RAT	Set	Protein SET	0	VEVTEFEDIK	VEVTEFEDIK	2	VEVTEFEDIK2	16385.2	8822.45	11782.1
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VEVTLPSSYHSAVCGLCGNMDK	VEVTLPSSYHSAVC(UniMod:4)GLC(UniMod:4)GNMDK	3	VEVTLPSSYHSAVC(UniMod:4)GLC(UniMod:4)GNMDK3	426543	483807	443509
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VEVTLPSSYHSAVCGLCGNMDKKPENDK	VEVTLPSSYHSAVC(UniMod:4)GLC(UniMod:4)GNMDKKPENDK	4	VEVTLPSSYHSAVC(UniMod:4)GLC(UniMod:4)GNMDKKPENDK4	22437.5	27606.1	32118.9
A0A8I6A5B0	A0A8I6A5B0	A0A8I6A5B0_RAT	Hycc2	Family with sequence similarity 126, member B	1	VEVTPTVPR	VEVTPTVPR	2	VEVTPTVPR2	6817.46	4361.02	8735.52
D3ZU83	D3ZU83	D3ZU83_RAT	Ergic3	Endoplasmic reticulum-Golgi intermediate compartment protein	1	VEVTVFDPDSLDPNR	VEVTVFDPDSLDPNR	2	VEVTVFDPDSLDPNR2	9197.54	9608.34	6477.76
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	VEVVEER	VEVVEER	2	VEVVEER2	272162	282491	336250
A0A0G2KB00	A0A0G2KB00	A0A0G2KB00_RAT	Frem1	Fras1 related extracellular matrix 1	1	VEVVMNEPITQR	VEVVMNEPITQR	2	VEVVMNEPITQR2	5772.74		4597.27
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	VEVVWADNSK	VEVVWADNSK	2	VEVVWADNSK2	565709	638500	475765
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	VEVWDVVDK	VEVWDVVDK	2	VEVWDVVDK2	36820.1	36608	36189.7
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	VEVWDVVDKGK	VEVWDVVDKGK	3	VEVWDVVDKGK3	37114.6	49221.3	54645.5
D3ZPD0	D3ZPD0	D3ZPD0_RAT	Ckap2	Cytoskeleton associated protein 2	1	VEVYEDNQDSK	VEVYEDNQDSK	2	VEVYEDNQDSK2	1606.89	2008.07	
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	VEVYLLELK	VEVYLLELK	2	VEVYLLELK2	68077	55185	40014.3
Q9JLD2	Q9JLD2	NEUS_RAT	Serpini1	Neuroserpin	1	VEVYLPR	VEVYLPR	2	VEVYLPR2	9708.9	7431.03	4040.05
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	VEVYLTELK	VEVYLTELK	2	VEVYLTELK2	174858	200700	190564
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	VEVYQQQIEMEK	VEVYQQQIEMEK	2	VEVYQQQIEMEK2	17972.9	23991.1	28848.4
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	VEVYQQQIEMEK	VEVYQQQIEMEK	3	VEVYQQQIEMEK3		4559.5	1109.91
Q6MFY6	Q6MFY6	PP1RB_RAT	Ppp1r11	E3 ubiquitin-protein ligase PPP1R11	1	VEWSSDTVDNEHMGR	VEWSSDTVDNEHMGR	2	VEWSSDTVDNEHMGR2			1945.19
Q6MFY6	Q6MFY6	PP1RB_RAT	Ppp1r11	E3 ubiquitin-protein ligase PPP1R11	1	VEWSSDTVDNEHMGR	VEWSSDTVDNEHMGR	3	VEWSSDTVDNEHMGR3	42079.6	34443.5	28216.9
Q6MFY6	Q6MFY6	PP1RB_RAT	Ppp1r11	E3 ubiquitin-protein ligase PPP1R11	1	VEWSSDTVDNEHMGRR	VEWSSDTVDNEHMGRR	3	VEWSSDTVDNEHMGRR3	4055.51	3869.34	2263.52
Q6MFY6	Q6MFY6	PP1RB_RAT	Ppp1r11	E3 ubiquitin-protein ligase PPP1R11	1	VEWSSDTVDNEHMGRR	VEWSSDTVDNEHMGRR	4	VEWSSDTVDNEHMGRR4	7699.33	8108.85	4018.96
D3ZGG8	D3ZGG8	D3ZGG8_RAT	Hps3	Hermansky-Pudlak syndrome 3 protein homolog	1	VEWTEGNESQK	VEWTEGNESQK	2	VEWTEGNESQK2	2220.56		2864.97
Q07977	Q07977	SIA8B_RAT	St8sia2	Alpha-2,8-sialyltransferase 8B	1	VEWVNALILK	VEWVNALILK	2	VEWVNALILK2	10297.1	9550.5	13557.2
D3ZW49	D3ZW49	D3ZW49_RAT	Tmem9b	TMEM9 domain family, member B	1	VEYAQQR	VEYAQQR	2	VEYAQQR2	117368	120425	79323.3
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	VEYGFQVK	VEYGFQVK	1	VEYGFQVK1	560232	605371	669826
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	VEYGFQVK	VEYGFQVK	2	VEYGFQVK2	3.35452e+06	3.13051e+06	2.95565e+06
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	VEYGFQVKVLR	VEYGFQVKVLR	3	VEYGFQVKVLR3	6542.54		
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	VEYHFLSPYVSPR	VEYHFLSPYVSPR	2	VEYHFLSPYVSPR2	5581.44	8161.39	9720.55
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	VEYHFLSPYVSPR	VEYHFLSPYVSPR	3	VEYHFLSPYVSPR3	93259.2	99774.9	104026
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	VEYNTSAHQSSFR	VEYNTSAHQSSFR	3	VEYNTSAHQSSFR3	43887.5	54862.7	46224.6
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	VEYPCGR	VEYPC(UniMod:4)GR	2	VEYPC(UniMod:4)GR2	3.09972e+06	3.19476e+06	3.5001e+06
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	VEYPDLTIDDSYWYR	VEYPDLTIDDSYWYR	2	VEYPDLTIDDSYWYR2	7679.65	11027	7359.32
D4ADS4	D4ADS4	D4ADS4_RAT	Mgst3	Microsomal glutathione S-transferase 3	1	VEYPVMYSTDPENGHMFNCIQR	VEYPVMYSTDPENGHMFNC(UniMod:4)IQR	3	VEYPVMYSTDPENGHMFNC(UniMod:4)IQR3	408200	404330	361905
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	VEYSHGDVVEYDCKPR	VEYSHGDVVEYDC(UniMod:4)KPR	2	VEYSHGDVVEYDC(UniMod:4)KPR2	4247.51	2615.82	1962.28
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	VEYSHGDVVEYDCKPR	VEYSHGDVVEYDC(UniMod:4)KPR	3	VEYSHGDVVEYDC(UniMod:4)KPR3	60081.5	53397.3	39746.7
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	VEYSHGDVVEYDCKPR	VEYSHGDVVEYDC(UniMod:4)KPR	4	VEYSHGDVVEYDC(UniMod:4)KPR4	158639	180158	150537
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	VEYTLGEESEAPGQR	VEYTLGEESEAPGQR	2	VEYTLGEESEAPGQR2	104460	142102	112527
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	VEYTLGEESEAPGQR	VEYTLGEESEAPGQR	3	VEYTLGEESEAPGQR3	16667.5	20652.5	27663.8
Q9Z1L0	Q9Z1L0	PK3CB_RAT	Pik3cb	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform	1	VEYVFGDHPLIQFQYIR	VEYVFGDHPLIQFQYIR	3	VEYVFGDHPLIQFQYIR3	5254.3	9501.68	3208.92
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	VEYVIGR	VEYVIGR	2	VEYVIGR2	700210	682673	811651
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	VFAADCLCR	VFAADC(UniMod:4)LC(UniMod:4)R	2	VFAADC(UniMod:4)LC(UniMod:4)R2	11817	10814	
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	VFAADCVCR	VFAADC(UniMod:4)VC(UniMod:4)R	2	VFAADC(UniMod:4)VC(UniMod:4)R2	49292.8	85269.3	72893
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	VFADYEAYVK	VFADYEAYVK	2	VFADYEAYVK2	63828.2	66048.5	55540.8
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	VFADYEEYIK	VFADYEEYIK	2	VFADYEEYIK2	32630.8	33915.6	31288.1
Q05511	Q05511	HEPS_RAT	Hpn	Serine protease hepsin	1	VFAGAVAR	VFAGAVAR	2	VFAGAVAR2	112274	106266	113118
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	VFAIQDPTLPLTSYK	VFAIQDPTLPLTSYK	2	VFAIQDPTLPLTSYK2	19814.5	27521.6	17368.1
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	VFALDQK	VFALDQK	1	VFALDQK1	512861	449054	383261
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	VFALDQK	VFALDQK	2	VFALDQK2	217031	229468	171336
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	VFANAPDSACVIGLR	VFANAPDSAC(UniMod:4)VIGLR	2	VFANAPDSAC(UniMod:4)VIGLR2	79385.7	65898.2	82420
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	VFANEVNAHR	VFANEVNAHR	2	VFANEVNAHR2	6758.98	6656.85	6599.1
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	VFANEVNAHR	VFANEVNAHR	3	VFANEVNAHR3	41282.7	38920.5	40687.3
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	VFANEVNAHRDQIIELDQTGNQLK	VFANEVNAHRDQIIELDQTGNQLK	4	VFANEVNAHRDQIIELDQTGNQLK4	7453.15	5907.77	13012.4
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	VFANILLYIQR	VFANILLYIQR	2	VFANILLYIQR2	10308.5	9944.14	9294.38
F1MAF5	F1MAF5	F1MAF5_RAT	Pcid2	PCI domain-containing protein 2	1	VFANNADQQLVK	VFANNADQQLVK	2	VFANNADQQLVK2	3478.39		2855.65
P51792	P51792;P51794	CLCN3_RAT	Clcn3	H(+)/Cl(-) exchange transporter 3	0	VFAPYACGSGIPEIK	VFAPYAC(UniMod:4)GSGIPEIK	2	VFAPYAC(UniMod:4)GSGIPEIK2	15057.8	7046.53	12574.1
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	VFASEMNAGIIK	VFASEMNAGIIK	2	VFASEMNAGIIK2	19960.5		19233
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	VFASLPQVER	VFASLPQVER	2	VFASLPQVER2	1.14675e+06	836206	886379
Q9ESS6	Q9ESS6	BCAM_RAT	Bcam	Basal cell adhesion molecule	1	VFATPEATEVAPNK	VFATPEATEVAPNK	2	VFATPEATEVAPNK2	3695.62	10319.4	4259.95
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	VFAVHQGR	VFAVHQGR	1	VFAVHQGR1	18318	22090.7	9527.76
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	VFAVHQGR	VFAVHQGR	2	VFAVHQGR2	60888.4	56920.6	46128.4
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	VFAVHQGRESKPLTAQQTTK	VFAVHQGRESKPLTAQQTTK	4	VFAVHQGRESKPLTAQQTTK4	9032.65	3678.22	5499.42
Q5U2X1	Q5U2X1	FBX9_RAT	Fbxo9	F-box only protein 9	1	VFAVITK	VFAVITK	2	VFAVITK2	8474.7	8412.43	
F1LNH3	F1LNH3	F1LNH3_RAT	Col6a2	Collagen type VI alpha 2 chain	1	VFAVVITDGR	VFAVVITDGR	2	VFAVVITDGR2	8982.49	9303.11	7153.42
D3ZAR1	D3ZAR1	ARH_RAT	Ldlrap1	Low density lipoprotein receptor adapter protein 1	1	VFAYIAQSQQNESLECHAFLCTK	VFAYIAQSQQNESLEC(UniMod:4)HAFLC(UniMod:4)TK	3	VFAYIAQSQQNESLEC(UniMod:4)HAFLC(UniMod:4)TK3	11595.6	11451.5	18431.5
A0A8I6AD67	A0A8I6AD67	A0A8I6AD67_RAT	Parp9	Poly [ADP-ribose] polymerase	1	VFCAEMTK	VFC(UniMod:4)AEMTK	2	VFC(UniMod:4)AEMTK2	3836.38	5157.99	5956.77
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	VFCIGPVFR	VFC(UniMod:4)IGPVFR	2	VFC(UniMod:4)IGPVFR2	105435	89587.6	85025.9
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	VFCNFPYAPQLSEALIK	VFC(UniMod:4)NFPYAPQLSEALIK	3	VFC(UniMod:4)NFPYAPQLSEALIK3	4243.24	13258	9593.64
P13941	P13941	CO3A1_RAT	Col3a1	Collagen alpha-1(III) chain	1	VFCNMETGETCINASPMTVPR	VFC(UniMod:4)NMETGETC(UniMod:4)INASPMTVPR	3	VFC(UniMod:4)NMETGETC(UniMod:4)INASPMTVPR3	5316.13		8564.31
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	VFCQPWQK	VFC(UniMod:4)QPWQK	2	VFC(UniMod:4)QPWQK2	456121	470228	467036
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	VFDAIEQK	VFDAIEQK	1	VFDAIEQK1	2102.91	3387.48	2621.86
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	VFDAIEQK	VFDAIEQK	2	VFDAIEQK2	875919	958826	838643
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	VFDAIEQKK	VFDAIEQKK	2	VFDAIEQKK2	1244.96	9501.77	9447.31
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	VFDAIMNFR	VFDAIMNFR	2	VFDAIMNFR2	141688	131436	111341
Q68FT3	Q68FT3	PYRD2_RAT	Pyroxd2	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2	1	VFDCIEAYAPGFK	VFDC(UniMod:4)IEAYAPGFK	2	VFDC(UniMod:4)IEAYAPGFK2	13121.2	16680.5	13197.6
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	VFDCQLSSR	VFDC(UniMod:4)QLSSR	2	VFDC(UniMod:4)QLSSR2	483709	480587	542530
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	VFDESLNFR	VFDESLNFR	2	VFDESLNFR2	50251.3	44697	45653.8
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	VFDFLVDSINK	VFDFLVDSINK	2	VFDFLVDSINK2	66019.8	49289.5	64397.5
A0A8I6A5X2	A0A8I6A5X2	A0A8I6A5X2_RAT	Usp32	ubiquitinyl hydrolase 1	1	VFDIDRDGVLSR	VFDIDRDGVLSR	3	VFDIDRDGVLSR3	4538.4	2903.57	8690.71
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	VFDIHLAFLK	VFDIHLAFLK	3	VFDIHLAFLK3	2115.26	4280.62	7332.61
P0DP29;P0DP30;P0DP31	P0DP30;P0DP29;P0DP31	CALM1_RAT;CALM2_RAT;CALM3_RAT	Calm1;Calm2;Calm3	Calmodulin-1	0	VFDKDGNGYISAAELR	VFDKDGNGYISAAELR	2	VFDKDGNGYISAAELR2	248880	246805	227709
P0DP29;P0DP30;P0DP31	P0DP30;P0DP29;P0DP31	CALM1_RAT;CALM2_RAT;CALM3_RAT	Calm1;Calm2;Calm3	Calmodulin-1	0	VFDKDGNGYISAAELR	VFDKDGNGYISAAELR	3	VFDKDGNGYISAAELR3	6.58672e+06	7.22773e+06	7.4868e+06
Q64119	Q64119	MYL6_RAT	Myl6	Myosin light polypeptide 6	1	VFDKEGNGTVMGAEIR	VFDKEGNGTVMGAEIR	2	VFDKEGNGTVMGAEIR2	197236	195232	
Q64119	Q64119	MYL6_RAT	Myl6	Myosin light polypeptide 6	1	VFDKEGNGTVMGAEIR	VFDKEGNGTVMGAEIR	3	VFDKEGNGTVMGAEIR3	4.32034e+06	5.0314e+06	
P02600	P02600;P16409	MYL1_RAT	Myl1	Myosin light chain 1/3, skeletal muscle isoform	0	VFDKEGNGTVMGAELR	VFDKEGNGTVMGAELR	2	VFDKEGNGTVMGAELR2			126408
P02600	P02600;P16409	MYL1_RAT	Myl1	Myosin light chain 1/3, skeletal muscle isoform	0	VFDKEGNGTVMGAELR	VFDKEGNGTVMGAELR	3	VFDKEGNGTVMGAELR3			3.73156e+06
Q4KLI9	Q4KLI9	FBXW5_RAT	Fbxw5	F-box/WD repeat-containing protein 5	1	VFDLGGDTEEEATDPGLHTSGSGHVK	VFDLGGDTEEEATDPGLHTSGSGHVK	4	VFDLGGDTEEEATDPGLHTSGSGHVK4	5154.01	6602.84	4128.65
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	VFDLLNR	VFDLLNR	2	VFDLLNR2	684258	595385	624823
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	VFDLLNRK	VFDLLNRK	2	VFDLLNRK2	44076.6	46193.6	36531.2
O08628	O08628	PCOC1_RAT	Pcolce	Procollagen C-endopeptidase enhancer 1	1	VFDMELHPSCR	VFDMELHPSC(UniMod:4)R	2	VFDMELHPSC(UniMod:4)R2		2782.22	
O08628	O08628	PCOC1_RAT	Pcolce	Procollagen C-endopeptidase enhancer 1	1	VFDMELHPSCR	VFDMELHPSC(UniMod:4)R	3	VFDMELHPSC(UniMod:4)R3	19977.6	33868.4	35937.3
Q5RKI1	Q5RKI1;Q6P3V8	IF4A2_RAT	Eif4a2	Eukaryotic initiation factor 4A-II	0	VFDMLNR	VFDMLNR	2	VFDMLNR2	304259	212796	219664
B2GV73	B2GV73	B2GV73_RAT	Arpc3	Actin-related protein 2/3 complex subunit 3	1	VFDPQNDKPSK	VFDPQNDKPSK	2	VFDPQNDKPSK2	131367	94315.6	99392.3
B2GV73	B2GV73	B2GV73_RAT	Arpc3	Actin-related protein 2/3 complex subunit 3	1	VFDPQNDKPSK	VFDPQNDKPSK	3	VFDPQNDKPSK3	1.23519e+06	1.1898e+06	1.20103e+06
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	VFDQQSSPMVTR	VFDQQSSPMVTR	2	VFDQQSSPMVTR2	19865.1	14440.9	8002.66
A0A8J8YFS5	A0A8J8YFS5	A0A8J8YFS5_RAT	Hars1	Histidine--tRNA ligase, cytoplasmic	1	VFDVIIR	VFDVIIR	2	VFDVIIR2	34966.1	28754.3	23106.3
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	VFDVRPGSDPMKPDATMVVK	VFDVRPGSDPMKPDATMVVK	3	VFDVRPGSDPMKPDATMVVK3	165244	125232	134301
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	VFDVRPGSDPMKPDATMVVK	VFDVRPGSDPMKPDATMVVK	4	VFDVRPGSDPMKPDATMVVK4	821469	858316	922769
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	VFDWASTSR	VFDWASTSR	2	VFDWASTSR2	92607.3	88737.8	77235.4
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	VFDWIEANLNEQQIASNTLVR	VFDWIEANLNEQQIASNTLVR	3	VFDWIEANLNEQQIASNTLVR3	39547.5	34667.4	27104.6
P52873	P52873	PYC_RAT	Pc	Pyruvate carboxylase, mitochondrial	1	VFDYSEYWEGAR	VFDYSEYWEGAR	2	VFDYSEYWEGAR2	2347.29	4566.46	9086.61
O35094	O35094	TIM44_RAT	Timm44	Mitochondrial import inner membrane translocase subunit TIM44	1	VFEANEEALGVVLHK	VFEANEEALGVVLHK	3	VFEANEEALGVVLHK3	7201.21	6562.15	12550
B0K014	B0K014	B0K014_RAT	Dtd1	D-aminoacyl-tRNA deacylase	1	VFEDESGK	VFEDESGK	2	VFEDESGK2	18301.8	5744.58	19675.5
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	VFEDNLLNDR	VFEDNLLNDR	2	VFEDNLLNDR2	17926	30668.7	14842.9
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VFEEDALSWEDK	VFEEDALSWEDK	2	VFEEDALSWEDK2	23776	29251.2	26589.6
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VFEEDALSWEDKLNR	VFEEDALSWEDKLNR	3	VFEEDALSWEDKLNR3	27667.6	29750.7	7102.77
Q5M7T1	Q5M7T1	CIAO1_RAT	Ciao1	Probable cytosolic iron-sulfur protein assembly protein CIAO1	1	VFEEDPGSDPQQPTFSLTAHLR	VFEEDPGSDPQQPTFSLTAHLR	3	VFEEDPGSDPQQPTFSLTAHLR3	12145.4	13589.6	11671.2
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	VFEEIQK	VFEEIQK	2	VFEEIQK2	57530.9	60823.7	53942
A0A8I6ACU6	A0A8I6ACU6	A0A8I6ACU6_RAT	Glcci1	Glucocorticoid induced 1	1	VFEEMASR	VFEEMASR	2	VFEEMASR2	26165.3	32186.5	24973.8
Q1H5H1	Q1H5H1	SELT_RAT	Selenot	Thioredoxin reductase-like selenoprotein T	1	VFEEYMR	VFEEYMR	2	VFEEYMR2	41330.6	38675.2	40063
Q6AYT0	Q6AYT0	QOR_RAT	Cryz	Quinone oxidoreductase	1	VFEFGGPEVLK	VFEFGGPEVLK	2	VFEFGGPEVLK2	5772.51	6651.02	6518.09
P97943	P97943	SCRB1_RAT	Scarb1	Scavenger receptor class B member 1	1	VFEGIPTYR	VFEGIPTYR	2	VFEGIPTYR2	65575.8	56807.2	57766.8
B2GV54	B2GV54	NCEH1_RAT	Nceh1	Neutral cholesterol ester hydrolase 1	1	VFEGPPKPDEPLR	VFEGPPKPDEPLR	3	VFEGPPKPDEPLR3	32215.6	25777.3	30400.8
B2GV54	B2GV54	NCEH1_RAT	Nceh1	Neutral cholesterol ester hydrolase 1	1	VFEGPPKPDEPLRR	VFEGPPKPDEPLRR	3	VFEGPPKPDEPLRR3	24054.7	37431.6	19321.4
B2GV54	B2GV54	NCEH1_RAT	Nceh1	Neutral cholesterol ester hydrolase 1	1	VFEGPPKPDEPLRR	VFEGPPKPDEPLRR	4	VFEGPPKPDEPLRR4	72058.7	73785.8	104599
P04762	P04762	CATA_RAT	Cat	Catalase	1	VFEHIGK	VFEHIGK	2	VFEHIGK2	17011.9	9060.89	10530.9
B0BNE5	B0BNE5	ESTD_RAT	Esd	S-formylglutathione hydrolase	1	VFEHSSVELK	VFEHSSVELK	3	VFEHSSVELK3	48947.5	20405.4	26538.2
Q63797	Q63797	PSME1_RAT	Psme1	Proteasome activator complex subunit 1	1	VFELMTSLHTK	VFELMTSLHTK	2	VFELMTSLHTK2	7988.15	9183	3314.33
Q63797	Q63797	PSME1_RAT	Psme1	Proteasome activator complex subunit 1	1	VFELMTSLHTK	VFELMTSLHTK	3	VFELMTSLHTK3	56303.7	47542.8	36395.1
A0A8I6AS17	A0A8I6AS17	A0A8I6AS17_RAT	Bsdc1	BSD domain containing 1	1	VFELNSDSGK	VFELNSDSGK	2	VFELNSDSGK2	24055.8	19258	31082
A0A0G2JUH8	A0A0G2JUH8	A0A0G2JUH8_RAT	Snx13	Sorting nexin 13	1	VFEMFQHNQLNR	VFEMFQHNQLNR	3	VFEMFQHNQLNR3		5596.92	6400.58
P01041	P01041	CYTB_RAT	Cstb	Cystatin-B	1	VFEPLPHENKPLTLSSYQTDKEK	VFEPLPHENKPLTLSSYQTDKEK	4	VFEPLPHENKPLTLSSYQTDKEK4	7976.9	9514.27	
D4A4L5	D4A4L5;A0A8I5ZSL2	D4A4L5_RAT	Isca2	Iron-sulfur cluster assembly 2	0	VFEQGGAR	VFEQGGAR	2	VFEQGGAR2	8000.46		
D3ZK93	D3ZK93	GSG1L_RAT	Gsg1l	Germ cell-specific gene 1-like protein	1	VFEQGYREEPTFIDPEAIK	VFEQGYREEPTFIDPEAIK	3	VFEQGYREEPTFIDPEAIK3	6783.71	7445.39	7541.73
P67779	P67779;A0A8I5ZUY9	PHB1_RAT	Phb1	Prohibitin 1	0	VFESIGK	VFESIGK	2	VFESIGK2	315555	259568	294499
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	VFESVVVDVLNR	VFESVVVDVLNR	2	VFESVVVDVLNR2	17307.9	12191.1	8014.88
P10247	P10247	HG2A_RAT	Cd74	H-2 class II histocompatibility antigen gamma chain	1	VFESWMK	VFESWMK	2	VFESWMK2	22102.1	22876.2	16921.6
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	VFETYKR	VFETYKR	2	VFETYKR2	36245.2	42241.1	31626.2
P22062	P22062	PIMT_RAT	Pcmt1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase	1	VFEVMLATDR	VFEVMLATDR	2	VFEVMLATDR2	92640.3	94273.8	92470.5
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	VFEVSASSLEK	VFEVSASSLEK	2	VFEVSASSLEK2	43098.9	42003.5	49588
P49242	P49242;M0R6L4	RS3A_RAT	Rps3a	Small ribosomal subunit protein eS1	0	VFEVSLADLQNDEVAFR	VFEVSLADLQNDEVAFR	2	VFEVSLADLQNDEVAFR2	4971.57	6067.57	3198.13
P49242	P49242;M0R6L4	RS3A_RAT	Rps3a	Small ribosomal subunit protein eS1	0	VFEVSLADLQNDEVAFR	VFEVSLADLQNDEVAFR	3	VFEVSLADLQNDEVAFR3	9298.25	7663.08	2679.96
F1LP90	A0A0G2K490;A0A8I5ZLV4;F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	0	VFFASVR	VFFASVR	2	VFFASVR2	579274	570075	593710
A0A0G2K1A2	A0A0G2K1A2	A0A0G2K1A2_RAT	Mpo	Myeloperoxidase	1	VFFASWR	VFFASWR	2	VFFASWR2	41716.8	28784.7	25372.8
P63322	P63322;P36860	RALA_RAT	Rala	Ras-related protein Ral-A	0	VFFDLMR	VFFDLMR	2	VFFDLMR2	494668	511605	547664
Q6DGG0	M0RB67;Q6DGG0;A0A8I6AK73	PPID_RAT	Ppid	Peptidyl-prolyl cis-trans isomerase D	0	VFFDVDIGGER	VFFDVDIGGER	2	VFFDVDIGGER2	4528.93		6955.35
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	VFFEQGATR	VFFEQGATR	2	VFFEQGATR2	3.30867e+06	2.26596e+06	2.32428e+06
F7FG68	F7FG68	F7FG68_RAT	Syvn1	Synoviolin 1	1	VFFGQLR	VFFGQLR	2	VFFGQLR2	19475.5	16592.1	20147.3
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	VFFINHNIK	VFFINHNIK	2	VFFINHNIK2	19109.3	17561.7	20429.9
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	VFFINHNIKK	VFFINHNIKK	3	VFFINHNIKK3		6183.63	7027.66
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	VFFLPSK	VFFLPSK	2	VFFLPSK2	11786.3	7839.91	14599
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	VFFMAVDGVAPR	VFFMAVDGVAPR	2	VFFMAVDGVAPR2	6022.52	7201.15	
Q5XIM0	Q5XIM0	Q5XIM0_RAT	Bcs1l	Mitochondrial chaperone BCS1	1	VFFNILEEAR	VFFNILEEAR	2	VFFNILEEAR2	29404.7	27099.5	13757.6
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	VFFRPGK	VFFRPGK	2	VFFRPGK2	11335.6	6795.78	9516.3
Q5I0C3	Q5I0C3	MCCA_RAT	Mccc1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	1	VFFSEGAQANR	VFFSEGAQANR	2	VFFSEGAQANR2	27882.2	27885.4	15755.3
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	VFFTDYGQIPK	VFFTDYGQIPK	2	VFFTDYGQIPK2	348546	442392	409376
M0R402	M0R402	M0R402_RAT	Tmx3	Thioredoxin-related transmembrane protein 3	1	VFFVYIGGESPLK	VFFVYIGGESPLK	2	VFFVYIGGESPLK2	36799.5	36534.9	27399.7
Q5RJK6	Q5RJK6	Q5RJK6_RAT	Inpp1	Inositol polyphosphate-1-phosphatase	1	VFGEESNEFTNDLGEK	VFGEESNEFTNDLGEK	2	VFGEESNEFTNDLGEK2	3538.6	1767.36	3797.84
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	VFGFSLITNK	VFGFSLITNK	2	VFGFSLITNK2	133087	114968	125796
A0A8I6A502	A0A8I6A502	A0A8I6A502_RAT	Tns3	Tensin 3	1	VFGFVAR	VFGFVAR	2	VFGFVAR2	20316.2	19390.4	22142.7
Q5BJS4	Q5BJS4	FUND1_RAT	Fundc1	FUN14 domain-containing protein 1	1	VFGHSSGPMVEK	VFGHSSGPMVEK	3	VFGHSSGPMVEK3	29065.7	22239.2	24294.3
P47824	P47824	P2RX1_RAT	P2rx1	P2X purinoceptor 1	1	VFGIHFDILVDGK	VFGIHFDILVDGK	3	VFGIHFDILVDGK3	37993	42942.1	47437.9
A0A0G2K1Q8	F1M2Q5;D4ACN5;A0A0G2K1Q8	ABCA3_RAT	Abca3	Phospholipid-transporting ATPase ABCA3	0	VFGILEK	VFGILEK	2	VFGILEK2	9894.28	7956.85	11015.3
Q3B7U1	Q3B7U1	Q3B7U1_RAT	Maged2	MAGE family member D2	1	VFGIQLK	VFGIQLK	2	VFGIQLK2	84445	77024.2	79618.1
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	VFGNAPPSTMTEK	VFGNAPPSTMTEK	2	VFGNAPPSTMTEK2	9163.08	4946.15	
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	VFGPGVER	VFGPGVER	2	VFGPGVER2	24184.1	11137.7	22844.1
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	VFGTHLMQDMVK	VFGTHLMQDMVK	3	VFGTHLMQDMVK3	25368.1	32289.9	22036
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	VFGVDDNQDFNRPIIK	VFGVDDNQDFNRPIIK	3	VFGVDDNQDFNRPIIK3	36361.4	40711.2	51776.9
F1LPV0	F1LPV0	F1LPV0_RAT	Nars1	asparagine--tRNA ligase	1	VFGWVHR	VFGWVHR	2	VFGWVHR2	11632	11511.6	11944.7
Q5RJY4	Q5RJY4	DRS7B_RAT	Dhrs7b	Dehydrogenase/reductase SDR family member 7B	1	VFHAAGAK	VFHAAGAK	2	VFHAAGAK2			10981.1
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	VFHLLGVDTLVVTNAAGGLNPK	VFHLLGVDTLVVTNAAGGLNPK	3	VFHLLGVDTLVVTNAAGGLNPK3	29979.6	18380.6	30200.3
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	VFHLPTTTFIGGQEPALPLR	VFHLPTTTFIGGQEPALPLR	3	VFHLPTTTFIGGQEPALPLR3	91280.1	95329	110214
O35346	O35346	FAK1_RAT	Ptk2	Focal adhesion kinase 1	1	VFHYFESSNEPTTWASIIR	VFHYFESSNEPTTWASIIR	3	VFHYFESSNEPTTWASIIR3	2553.1		3240.11
Q06000	Q06000	LIPL_RAT	Lpl	Lipoprotein lipase	1	VFHYQVK	VFHYQVK	2	VFHYQVK2		3644.93	4044.31
G3V9R8	G3V9R8	HNRPC_RAT	Hnrnpc	Heterogeneous nuclear ribonucleoprotein C	1	VFIGNLNTLVVK	VFIGNLNTLVVK	2	VFIGNLNTLVVK2	4219.33	5210.11	5302.64
D4A7F6	D4A7F6	D4A7F6_RAT	Colec10	Collectin subfamily member 10	1	VFIGVNDLEK	VFIGVNDLEK	2	VFIGVNDLEK2	1.43963e+06	1.41478e+06	1.42728e+06
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	VFIHRPDISK	VFIHRPDISK	3	VFIHRPDISK3	100993	81582.7	102370
P82995	P82995;A0A8I5ZQP6	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	0	VFIMDNCEELIPEYLNFIR	VFIMDNC(UniMod:4)EELIPEYLNFIR	3	VFIMDNC(UniMod:4)EELIPEYLNFIR3	154202	224153	212852
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	VFIMDSCDELIPEYLNFIR	VFIMDSC(UniMod:4)DELIPEYLNFIR	3	VFIMDSC(UniMod:4)DELIPEYLNFIR3	178391	148832	142233
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	VFIPGLPAPSLTMSNMMPR	VFIPGLPAPSLTMSNMMPR	3	VFIPGLPAPSLTMSNMMPR3			2187.15
P27605	P27605	HPRT_RAT	Hprt1	Hypoxanthine-guanine phosphoribosyltransferase	1	VFIPHGLIMDR	VFIPHGLIMDR	2	VFIPHGLIMDR2	8394.62	6644.85	4855.43
P27605	P27605	HPRT_RAT	Hprt1	Hypoxanthine-guanine phosphoribosyltransferase	1	VFIPHGLIMDR	VFIPHGLIMDR	3	VFIPHGLIMDR3	113096	107306	112359
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	VFITDDFHDMMPK	VFITDDFHDMMPK	2	VFITDDFHDMMPK2	161912	177203	125105
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	VFITDDFHDMMPK	VFITDDFHDMMPK	3	VFITDDFHDMMPK3	2.07845e+06	2.1369e+06	2.23275e+06
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	VFITTDLCGQK	VFITTDLC(UniMod:4)GQK	2	VFITTDLC(UniMod:4)GQK2	9459.96	15642.4	13666.1
Q5XFW8	Q5XFW8	SEC13_RAT	Sec13	Protein SEC13 homolog	1	VFIWTCDDASGNMWSPK	VFIWTC(UniMod:4)DDASGNMWSPK	3	VFIWTC(UniMod:4)DDASGNMWSPK3	5620.01	1685.64	5222.87
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	VFIYHGSPTGIITK	VFIYHGSPTGIITK	2	VFIYHGSPTGIITK2	2800.32	1306.7	
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	VFIYHGSPTGIITK	VFIYHGSPTGIITK	3	VFIYHGSPTGIITK3	166969	151909	134833
P08650	P08650	CO5_RAT	C5	Complement C5	1	VFKDVFLEMNIPYSVVR	VFKDVFLEMNIPYSVVR	3	VFKDVFLEMNIPYSVVR3	66997.1	69076.9	58825.2
B5DEH0	B5DEH0	LIMD1_RAT	Limd1	LIM domain-containing protein 1	1	VFKPLVDTQPWLQDGPK	VFKPLVDTQPWLQDGPK	3	VFKPLVDTQPWLQDGPK3	30543.5	22632.8	29334.7
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	VFLADQPIEAPEEPR	VFLADQPIEAPEEPR	2	VFLADQPIEAPEEPR2	237588	254501	221330
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	VFLADQPIEAPEEPR	VFLADQPIEAPEEPR	3	VFLADQPIEAPEEPR3	62742.8	61653.4	76100.7
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	VFLADQPIEAPEEPRR	VFLADQPIEAPEEPRR	3	VFLADQPIEAPEEPRR3	40508.6	35194.6	47632.9
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	VFLAEFK	VFLAEFK	2	VFLAEFK2	197713	179768	163745
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	VFLALVEEVEDR	VFLALVEEVEDR	2	VFLALVEEVEDR2	13474	4660.25	11287.1
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	VFLAPWK	VFLAPWK	2	VFLAPWK2	15924.3	12088.8	9839.75
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	VFLATNSDYK	VFLATNSDYK	2	VFLATNSDYK2	130807	157208	180100
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	VFLDCFCK	VFLDC(UniMod:4)FC(UniMod:4)K	2	VFLDC(UniMod:4)FC(UniMod:4)K2	54615.2	51898	55063.4
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	VFLDHTTIPDTLK	VFLDHTTIPDTLK	2	VFLDHTTIPDTLK2	5265.38	6217.98	4226.98
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	VFLDHTTIPDTLK	VFLDHTTIPDTLK	3	VFLDHTTIPDTLK3	282674	312665	307753
O70196	O70196	PPCE_RAT	Prep	Prolyl endopeptidase	1	VFLDPNTLSDDGTVALR	VFLDPNTLSDDGTVALR	2	VFLDPNTLSDDGTVALR2	1741.22	1575.08	
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	VFLEFHQFFLDR	VFLEFHQFFLDR	3	VFLEFHQFFLDR3	43159.3	33624	42463.4
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	VFLEIDNR	VFLEIDNR	2	VFLEIDNR2	1676.22	3616.6	
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	VFLENVETFIK	VFLENVETFIK	2	VFLENVETFIK2	18540.6	23715.5	16523.8
P62804	P62804	H4_RAT	H4c16	Histone H4	1	VFLENVIR	VFLENVIR	2	VFLENVIR2	202087	89165.8	134778
D3ZGL3	D3ZGL3	D3ZGL3_RAT	Hhip	Hedgehog-interacting protein	1	VFLEVAELHR	VFLEVAELHR	3	VFLEVAELHR3		4064.26	
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	VFLEYIQPK	VFLEYIQPK	2	VFLEYIQPK2	97196.3	125578	117920
A0A8I5ZVI9	A0A8I5ZVI9	A0A8I5ZVI9_RAT	Ranbp3	RAN binding protein 3	1	VFLISASSK	VFLISASSK	2	VFLISASSK2	21236.3	28833.5	21335.3
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	VFLKYPESLRPAFPR	VFLKYPESLRPAFPR	4	VFLKYPESLRPAFPR4	21729.7	20016	21891.2
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	VFLLECSVR	VFLLEC(UniMod:4)SVR	2	VFLLEC(UniMod:4)SVR2	21327.6	24399	20054
P49432	P49432	ODPB_RAT	Pdhb	Pyruvate dehydrogenase E1 component subunit beta, mitochondrial	1	VFLLGEEVAQYDGAYK	VFLLGEEVAQYDGAYK	2	VFLLGEEVAQYDGAYK2	45346.5	40069.1	38202.5
P49432	P49432	ODPB_RAT	Pdhb	Pyruvate dehydrogenase E1 component subunit beta, mitochondrial	1	VFLLGEEVAQYDGAYK	VFLLGEEVAQYDGAYK	3	VFLLGEEVAQYDGAYK3	12670.4	11113.9	14932
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	VFLLSFIR	VFLLSFIR	2	VFLLSFIR2	91659.3	69833.1	108751
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	VFLNILPPLTNSK	VFLNILPPLTNSK	2	VFLNILPPLTNSK2	88866	101907	86056.2
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	VFLNILPPLTNSK	VFLNILPPLTNSK	3	VFLNILPPLTNSK3	9590.36	6600.6	8020.38
F1LNS2	F1LNS2	F1LNS2_RAT	Dennd10	DENN domain containing 10	1	VFLNVEALK	VFLNVEALK	2	VFLNVEALK2	14592.9	15543	11879.4
F1M3G7	F1M3G7	AKP13_RAT	Akap13	A-kinase anchor protein 13	1	VFLPGEPLQMENTQK	VFLPGEPLQMENTQK	2	VFLPGEPLQMENTQK2	13785	17926.8	10501.1
F7EWF8	F7EWF8	F7EWF8_RAT	Anapc2	Anaphase-promoting complex subunit 2	1	VFLQDNPSRPTSPEAGNTLR	VFLQDNPSRPTSPEAGNTLR	3	VFLQDNPSRPTSPEAGNTLR3	6773	3547.33	
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	VFLQYLPAIR	VFLQYLPAIR	2	VFLQYLPAIR2	133390	155810	150150
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	VFLQYLPAIR	VFLQYLPAIR	3	VFLQYLPAIR3	20445.4	18934.6	26323.4
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	VFLSAQMQR	VFLSAQMQR	2	VFLSAQMQR2	15423.7	23538.1	23821.2
Q32Q06	D3ZRP6;Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	0	VFLSGMPELR	VFLSGMPELR	2	VFLSGMPELR2	147715	149424	149579
Q8CIN7	Q8CIN7	IMPA2_RAT	Impa2	Inositol monophosphatase 2	1	VFLSNMER	VFLSNMER	2	VFLSNMER2	2000.34		
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	VFLTLLHFDSPPIPHVPHR	VFLTLLHFDSPPIPHVPHR	4	VFLTLLHFDSPPIPHVPHR4		10234.9	5605.99
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	VFLTVPSLSSTAEEK	VFLTVPSLSSTAEEK	2	VFLTVPSLSSTAEEK2	39149.6	27368.1	44509.3
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	VFLVIADSLQQK	VFLVIADSLQQK	2	VFLVIADSLQQK2	45170.6	51290	36955.8
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	VFLYEVIPEAPFFLECNSFTSPDPHK	VFLYEVIPEAPFFLEC(UniMod:4)NSFTSPDPHK	4	VFLYEVIPEAPFFLEC(UniMod:4)NSFTSPDPHK4			2548.17
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	VFMENLMK	VFMENLMK	2	VFMENLMK2	59992.5	53276.6	53224.8
Q6AXM6	Q6AXM6	Q6AXM6_RAT	Icam2	Intercellular adhesion molecule 2	1	VFMGEAFTIECK	VFMGEAFTIEC(UniMod:4)K	2	VFMGEAFTIEC(UniMod:4)K2	9275.67		5318.46
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	VFMHDNSQGR	VFMHDNSQGR	3	VFMHDNSQGR3	9676.52	13703.2	9167.59
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	VFMNCQSK	VFMNC(UniMod:4)QSK	2	VFMNC(UniMod:4)QSK2	47671	50085.5	43266.2
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	VFMQEFK	VFMQEFK	1	VFMQEFK1	3215.32		
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	VFMQEFK	VFMQEFK	2	VFMQEFK2	982668	845958	1.09923e+06
P02761	M0R8N5;A0A8I6ANP0;P02761	MUP_RAT		Major urinary protein	0	VFMQHIDVLENSLGFK	VFMQHIDVLENSLGFK	2	VFMQHIDVLENSLGFK2	12712.2	19783.8	19679.5
P02761	M0R8N5;A0A8I6ANP0;P02761	MUP_RAT		Major urinary protein	0	VFMQHIDVLENSLGFK	VFMQHIDVLENSLGFK	3	VFMQHIDVLENSLGFK3	105009	107989	90253.7
Q5M890	Q5M890	Q5M890_RAT	Apon	Apolipoprotein N	1	VFMSFLR	VFMSFLR	2	VFMSFLR2	153029	97552.3	112723
P27590	P27590	UROM_RAT	Umod	Uromodulin	1	VFMYLNDR	VFMYLNDR	2	VFMYLNDR2	21140	12661.8	18286.4
D3ZZ26	D3ZZ26	D3ZZ26_RAT	Ppp1r3d	Protein phosphatase 1, regulatory subunit 3D	1	VFNAGDDPSVPLHVLSR	VFNAGDDPSVPLHVLSR	2	VFNAGDDPSVPLHVLSR2	16854.1	12469.7	11168.2
D3ZZ26	D3ZZ26	D3ZZ26_RAT	Ppp1r3d	Protein phosphatase 1, regulatory subunit 3D	1	VFNAGDDPSVPLHVLSR	VFNAGDDPSVPLHVLSR	3	VFNAGDDPSVPLHVLSR3	471026	473929	542936
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	VFNAGGAPR	VFNAGGAPR	2	VFNAGGAPR2	77074.9	81981.9	79080.7
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	VFNETPINPR	VFNETPINPR	2	VFNETPINPR2	259216	285899	261959
A0A0G2K2B7	A0A0G2K2B7	A0A0G2K2B7_RAT	Wdr20	WD repeat domain 20	1	VFNFDSVELHGTMK	VFNFDSVELHGTMK	3	VFNFDSVELHGTMK3	4088.19	3886.03	4810.33
A0A0G2JUU7	A0A0G2JUU7	A0A0G2JUU7_RAT	Tubgcp3	Gamma-tubulin complex component	1	VFNFLWR	VFNFLWR	2	VFNFLWR2	8237.53	11087.7	6901.15
P62815	P62815	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	1	VFNGSGKPIDR	VFNGSGKPIDR	3	VFNGSGKPIDR3	40285.3	41426	43577.8
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	VFNHCFTGSGVIDWLVSNK	VFNHC(UniMod:4)FTGSGVIDWLVSNK	3	VFNHC(UniMod:4)FTGSGVIDWLVSNK3	1.19209e+06	1.58239e+06	1.46109e+06
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	VFNHCFTGSGVIDWLVSNK	VFNHC(UniMod:4)FTGSGVIDWLVSNK	4	VFNHC(UniMod:4)FTGSGVIDWLVSNK4	6737.52	4617.53	4400.82
Q4KM33	Q4KM33	PLEK_RAT	Plek	Pleckstrin	1	VFNHCFTGSGVIDWLVSNKLVR	VFNHC(UniMod:4)FTGSGVIDWLVSNKLVR	4	VFNHC(UniMod:4)FTGSGVIDWLVSNKLVR4	1935.78	3575.4	5750.09
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	VFNKYPTSK	VFNKYPTSK	2	VFNKYPTSK2	1132.01	1304.96	
Q9ET64	Q9ET64	NSMA_RAT	Smpd2	Sphingomyelin phosphodiesterase 2	1	VFNLNCWDIPYLSK	VFNLNC(UniMod:4)WDIPYLSK	2	VFNLNC(UniMod:4)WDIPYLSK2	22191.5	30154.6	20107.6
P47942	P47942	DPYL2_RAT	Dpysl2	Dihydropyrimidinase-related protein 2	1	VFNLYPR	VFNLYPR	2	VFNLYPR2	50643.4	51236.2	56526.8
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	VFNNDADLSGITEDAPLK	VFNNDADLSGITEDAPLK	2	VFNNDADLSGITEDAPLK2	2.87919e+06	2.86113e+06	2.9992e+06
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	VFNNDADLSGITEDAPLK	VFNNDADLSGITEDAPLK	3	VFNNDADLSGITEDAPLK3	536637	552020	570461
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	VFNNIGADLLSGGESENREDGLQGK	VFNNIGADLLSGGESENREDGLQGK	3	VFNNIGADLLSGGESENREDGLQGK3	38598.7	54415.2	47959.1
Q4FZY0	Q4FZY0	EFHD2_RAT	Efhd2	EF-hand domain-containing protein D2	1	VFNPYTEFK	VFNPYTEFK	2	VFNPYTEFK2	129445	109831	133418
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	VFNTTERDEQGSK	VFNTTERDEQGSK	3	VFNTTERDEQGSK3	29774.7		18834.1
Q6AYT3	Q6AYT3;A0A8I5YBA4	RTCB_RAT	Rtcb	RNA-splicing ligase RtcB homolog	0	VFNTTPDDLDLHVIYDVSHNIAK	VFNTTPDDLDLHVIYDVSHNIAK	4	VFNTTPDDLDLHVIYDVSHNIAK4	19684.6	14091.9	14233
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	VFNYNTLER	VFNYNTLER	2	VFNYNTLER2	234263	214175	242487
Q68FX1	Q68FX1	MPI_RAT	Mpi	Mannose-6-phosphate isomerase	1	VFPLSCVVQQYAWGK	VFPLSC(UniMod:4)VVQQYAWGK	2	VFPLSC(UniMod:4)VVQQYAWGK2			2576.26
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	VFPSHFTQQR	VFPSHFTQQR	2	VFPSHFTQQR2	21286.8		
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	VFPSHFTQQR	VFPSHFTQQR	3	VFPSHFTQQR3	78797	84674.3	76432.4
A0A8I6AE91	A0A8I6AE91	A0A8I6AE91_RAT	Gga2	Golgi associated, gamma adaptin ear containing, ARF binding protein 2	1	VFPSPEPCGK	VFPSPEPC(UniMod:4)GK	2	VFPSPEPC(UniMod:4)GK2	63106	29898.5	41556.4
P97629	P97629	LCAP_RAT	Lnpep	Leucyl-cystinyl aminopeptidase	1	VFPWAQIR	VFPWAQIR	2	VFPWAQIR2	104005	105286	115121
P08650	P08650	CO5_RAT	C5	Complement C5	1	VFQAFDDK	VFQAFDDK	1	VFQAFDDK1	6661.07	6641.74	5982.54
P08650	P08650	CO5_RAT	C5	Complement C5	1	VFQAFDDK	VFQAFDDK	2	VFQAFDDK2	859199	697315	627624
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	VFQANNDATELVLNK	VFQANNDATELVLNK	2	VFQANNDATELVLNK2	42562.3	39150	33838.3
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	VFQANNDATELVLNK	VFQANNDATELVLNK	3	VFQANNDATELVLNK3	28749.2	27703.5	32401.1
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	VFQDDMQETIAQLFK	VFQDDMQETIAQLFK	2	VFQDDMQETIAQLFK2	611522	395238	556561
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	VFQDDMQETIAQLFK	VFQDDMQETIAQLFK	3	VFQDDMQETIAQLFK3	18385.1	14613.7	20002.4
A0A8I6AWZ3	A0A8I5Y9H3;A0A8I6AWZ3	A0A8I6AWZ3_RAT	Agap1	ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	0	VFQDVAQK	VFQDVAQK	2	VFQDVAQK2			28531.3
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	VFQESLR	VFQESLR	2	VFQESLR2	52217.6	49335.1	45909.6
Q8CGU4	Q8CGU4	AGAP2_RAT	Agap2	Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2	1	VFQEVAQK	VFQEVAQK	2	VFQEVAQK2	5361.74	6956.48	
P83732	P83732	RL24_RAT	Rpl24	Large ribosomal subunit protein eL24	1	VFQFLNAK	VFQFLNAK	2	VFQFLNAK2	23480.6	38496.6	24498.5
Q8CHI9	Q8CHI9	CHSTF_RAT	Chst15	Carbohydrate sulfotransferase 15	1	VFQFLNLGPLSEK	VFQFLNLGPLSEK	2	VFQFLNLGPLSEK2	2722.99	7410.65	12144.1
Q642B0	Q642B0	Q642B0_RAT	Gpc4	Glypican 4	1	VFQGCGPPKPLPAGR	VFQGC(UniMod:4)GPPKPLPAGR	3	VFQGC(UniMod:4)GPPKPLPAGR3	64272.2	74344.8	68126.1
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	VFQGLDK	VFQGLDK	1	VFQGLDK1	59402.5	47535.8	60173.8
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	VFQGLDK	VFQGLDK	2	VFQGLDK2	8.72336e+06	1.1029e+07	1.03628e+07
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	VFQGNLDNNSHK	VFQGNLDNNSHK	2	VFQGNLDNNSHK2	4848.99	3728.1	3062.35
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	VFQGNLDNNSHK	VFQGNLDNNSHK	3	VFQGNLDNNSHK3	6454.77	9969.58	25755.8
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	VFQGNLDNNSHKK	VFQGNLDNNSHKK	3	VFQGNLDNNSHKK3	26414	34050.4	28839.3
Q9JIL8	Q9JIL8	RAD50_RAT	Rad50	DNA repair protein RAD50	1	VFQGTDEQLNDLYHNHQR	VFQGTDEQLNDLYHNHQR	4	VFQGTDEQLNDLYHNHQR4	9983.97	3065.53	
D4A5Z0	A0A8I6AML2;D4A5Z0	D4A5Z0_RAT	Csgalnact2	Hexosyltransferase	0	VFQLEMGLTR	VFQLEMGLTR	2	VFQLEMGLTR2	5097.03	3032.62	
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	VFQLEPR	VFQLEPR	2	VFQLEPR2	8965.63		10941.8
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	VFQLLPSFPTLTR	VFQLLPSFPTLTR	2	VFQLLPSFPTLTR2	108534	133877	134168
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	VFQLLPSFPTLTR	VFQLLPSFPTLTR	3	VFQLLPSFPTLTR3	4575.59	3559.92	2336.77
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	VFQMEWEEVGK	VFQMEWEEVGK	2	VFQMEWEEVGK2	418827	505943	525930
Q64350	Q64350	EI2BE_RAT	Eif2b5	Translation initiation factor eIF-2B subunit epsilon	1	VFQNEVLGTLQR	VFQNEVLGTLQR	2	VFQNEVLGTLQR2	30388.3	31894.3	37954.3
Q64350	Q64350	EI2BE_RAT	Eif2b5	Translation initiation factor eIF-2B subunit epsilon	1	VFQNEVLGTLQR	VFQNEVLGTLQR	3	VFQNEVLGTLQR3	4825.56	4963.06	5090.52
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	VFQPPPPPPAPSGDAATEK	VFQPPPPPPAPSGDAATEK	3	VFQPPPPPPAPSGDAATEK3	3934.93	10837.9	5571.64
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	VFQPPPPPPAPSGDAATEKDR	VFQPPPPPPAPSGDAATEKDR	3	VFQPPPPPPAPSGDAATEKDR3	11253.9	15406.6	17513.4
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	VFQQMYEK	VFQQMYEK	2	VFQQMYEK2	26209	26785.4	31525.1
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	VFQSSTSQEQVYNDCAK	VFQSSTSQEQVYNDC(UniMod:4)AK	3	VFQSSTSQEQVYNDC(UniMod:4)AK3	37765.9	49902.4	53471
P51111	P51111	HD_RAT	Htt	Huntingtin	1	VFQTLHSAGQSSMVR	VFQTLHSAGQSSMVR	3	VFQTLHSAGQSSMVR3	4683.2	8721.62	3533.36
P18422	A0A8I6G7Q5;P18422	PSA3_RAT	Psma3	Proteasome subunit alpha type-3	0	VFQVEYAMK	VFQVEYAMK	2	VFQVEYAMK2	1.88349e+06	1.77406e+06	1.97973e+06
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	VFREFHLHLR	VFREFHLHLR	3	VFREFHLHLR3	27042	37607.1	34260.6
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	VFREFHLHLRLPISVR	VFREFHLHLRLPISVR	4	VFREFHLHLRLPISVR4	169656	147664	139269
O35162	O35162	HSP13_RAT	Hspa13	Heat shock 70 kDa protein 13	1	VFRPGLSDSTSGK	VFRPGLSDSTSGK	3	VFRPGLSDSTSGK3	45437.2	41253.6	39559.3
Q63468	Q63468	KPRA_RAT	Prpsap1	Phosphoribosyl pyrophosphate synthase-associated protein 1	1	VFSANSTAACTELAK	VFSANSTAAC(UniMod:4)TELAK	2	VFSANSTAAC(UniMod:4)TELAK2	4505.18	5705.89	4979.54
A0A8I6A9T1	A0A8I6A9T1	A0A8I6A9T1_RAT	Traf7	TNF receptor associated factor 7	1	VFSASYDR	VFSASYDR	2	VFSASYDR2	9447.69		
Q99PD4	Q99PD4	ARC1A_RAT	Arpc1a	Actin-related protein 2/3 complex subunit 1A	1	VFSAYIK	VFSAYIK	2	VFSAYIK2	83365.9	77258.4	83273.4
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	VFSDEVQQQAQLSTIR	VFSDEVQQQAQLSTIR	2	VFSDEVQQQAQLSTIR2	82784	87781.5	79715
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	VFSDEVQQQAQLSTIR	VFSDEVQQQAQLSTIR	3	VFSDEVQQQAQLSTIR3	91235	94408	108330
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	VFSDHLTSYVR	VFSDHLTSYVR	3	VFSDHLTSYVR3	12154.8	12787.1	11502.9
P0CE43	P0CE43	GRB10_RAT	Grb10	Growth factor receptor-bound protein 10	1	VFSEDGTSK	VFSEDGTSK	2	VFSEDGTSK2	51945.3	64848.5	54252.3
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	VFSGVVSTGLK	VFSGVVSTGLK	2	VFSGVVSTGLK2	201265	173083	190274
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	VFSIPFYK	VFSIPFYK	2	VFSIPFYK2	515117	486635	560784
A0A8I6ASM9	A0A8I6ASM9	A0A8I6ASM9_RAT	Smdt1	Essential MCU regulator, mitochondrial	1	VFSIVIPFLYVGTLISK	VFSIVIPFLYVGTLISK	3	VFSIVIPFLYVGTLISK3	1005.97		
F1LXF5	F1LXF5	F1LXF5_RAT	Get4	Guided entry of tail-anchored proteins factor 4	1	VFSLMDPNSPER	VFSLMDPNSPER	2	VFSLMDPNSPER2	110669	118565	117862
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VFSLYAQGEYGLSYER	VFSLYAQGEYGLSYER	2	VFSLYAQGEYGLSYER2	68753.9	87435.3	84739.1
P35000	P35000	VIPR2_RAT	Vipr2	Vasoactive intestinal polypeptide receptor 2	1	VFSNFYSR	VFSNFYSR	2	VFSNFYSR2	36381.3	28561.7	38765.5
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	VFSNVSIILFLNK	VFSNVSIILFLNK	2	VFSNVSIILFLNK2		69518.2	
P48199	P48199	CRP_RAT	Crp	C-reactive protein	1	VFSPNVLNWR	VFSPNVLNWR	2	VFSPNVLNWR2	192791	137898	191402
P48199	P48199	CRP_RAT	Crp	C-reactive protein	1	VFSPNVLNWR	VFSPNVLNWR	3	VFSPNVLNWR3	1.08647e+06	921602	1.14734e+06
P48199	P48199	CRP_RAT	Crp	C-reactive protein	1	VFSPNVLNWRALK	VFSPNVLNWRALK	3	VFSPNVLNWRALK3	7565.6	7770.86	7515.83
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	VFSPNVVNLTLVDLPGMTK	VFSPNVVNLTLVDLPGMTK	3	VFSPNVVNLTLVDLPGMTK3	13845.7	21909	20285.3
P05544	P05544;P09005	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	VFSQQADLSR	VFSQQADLSR	2	VFSQQADLSR2	3.51492e+06	3.61168e+06	3.62385e+06
B0BNE3	B0BNE3	B0BNE3_RAT	Trappc5	Trafficking protein particle complex subunit 5	1	VFSVAELQAR	VFSVAELQAR	2	VFSVAELQAR2	34781	37885.9	49900.5
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	VFSVAITPDHLEPR	VFSVAITPDHLEPR	3	VFSVAITPDHLEPR3	30037.5	26694	28271.3
P63329	P20651;P63329	PP2BA_RAT	Ppp3ca	Protein phosphatase 3 catalytic subunit alpha	0	VFSVLREESESVLTLK	VFSVLREESESVLTLK	3	VFSVLREESESVLTLK3		39755.5	42441.4
P05503	P05503	COX1_RAT	Mtco1	Cytochrome c oxidase subunit 1	1	VFSWLATLHGGNIK	VFSWLATLHGGNIK	3	VFSWLATLHGGNIK3	26245.3	12419.2	17270.1
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	VFSWLQQEGQLSEEEMAR	VFSWLQQEGQLSEEEMAR	3	VFSWLQQEGQLSEEEMAR3	6461.05	3250.19	
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	VFSWSVSDQPGR	VFSWSVSDQPGR	2	VFSWSVSDQPGR2	9501.13	11294.1	5877.2
G3V8G2	G3V8G2	G3V8G2_RAT	Psmd5	26S proteasome non-ATPase regulatory subunit 5	1	VFTAIANQPWAQK	VFTAIANQPWAQK	2	VFTAIANQPWAQK2	59278.2	40521.7	56668.9
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	VFTAQTQPHEEQLNGTFR	VFTAQTQPHEEQLNGTFR	3	VFTAQTQPHEEQLNGTFR3	57049.9	64867.1	51412.8
Q3SWS8	Q3SWS8	RAE1L_RAT	Rae1	mRNA export factor	1	VFTASCDK	VFTASC(UniMod:4)DK	2	VFTASC(UniMod:4)DK2	28804.6	28561.1	38866.7
Q5BK49	Q5BK49	TACT_RAT	Cd96	T-cell surface protein tactile	1	VFTCLLK	VFTC(UniMod:4)LLK	2	VFTC(UniMod:4)LLK2	20343.8	21190.7	17183.1
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	VFTDVPSNCR	VFTDVPSNC(UniMod:4)R	2	VFTDVPSNC(UniMod:4)R2	486092	418039	465516
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	VFTEADER	VFTEADER	2	VFTEADER2	20732.8	23640.9	24940.6
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	VFTLLDHK	VFTLLDHK	2	VFTLLDHK2	69022.1	77143.1	85191.7
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	VFTNSNIR	VFTNSNIR	2	VFTNSNIR2	23398.2	30831.9	30058.4
A0A8I5ZUE7	A0A8I5ZUE7	A0A8I5ZUE7_RAT	Zc3h7b	Zinc finger CCCH-type containing 7B	1	VFTSDSDASGWAYR	VFTSDSDASGWAYR	2	VFTSDSDASGWAYR2	2594.51	3022.09	4485.66
D3ZYR1	D3ZYR1	FCHO2_RAT	Fcho2	F-BAR domain only protein 2	1	VFTSNPSPAVLCFR	VFTSNPSPAVLC(UniMod:4)FR	2	VFTSNPSPAVLC(UniMod:4)FR2	52989.6	52628.1	51572.4
B0BN63	B0BN63	B0BN63_RAT	Ahsa1	Activator of Hsp90 ATPase activity 1	1	VFTTQELVQAFTHAPAALEADR	VFTTQELVQAFTHAPAALEADR	3	VFTTQELVQAFTHAPAALEADR3	21992.3	20961.1	14670.9
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	VFTTVGSAEK	VFTTVGSAEK	2	VFTTVGSAEK2	48425.8	28316.5	33940.2
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	VFVADENDNPPQFYPR	VFVADENDNPPQFYPR	2	VFVADENDNPPQFYPR2	4924.24	5805.09	7345.11
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	VFVADENDNPPQFYPR	VFVADENDNPPQFYPR	3	VFVADENDNPPQFYPR3	12545.2	13810.4	6189.2
A0A0G2JZH0	A0A0G2JZH0	A0A0G2JZH0_RAT	Cab39	Calcium binding protein 39	1	VFVANPNK	VFVANPNK	2	VFVANPNK2	51328.2	42520.6	34741.8
A0A0G2K8I0	A0A0G2K8I0	A0A0G2K8I0_RAT	Sh3bgrl2	SH3 domain-binding glutamic acid-rich-like protein	1	VFVASCSGFVAIK	VFVASC(UniMod:4)SGFVAIK	2	VFVASC(UniMod:4)SGFVAIK2	30441.4	34084.6	27051.3
A0A0G2K8I0	A0A0G2K8I0	A0A0G2K8I0_RAT	Sh3bgrl2	SH3 domain-binding glutamic acid-rich-like protein	1	VFVASCSGFVAIKK	VFVASC(UniMod:4)SGFVAIKK	3	VFVASC(UniMod:4)SGFVAIKK3	9940.69	19827.1	8703
D3ZUN5	D3ZUN5	D3ZUN5_RAT	Pofut2	GDP-fucose protein O-fucosyltransferase 2	1	VFVATDAIR	VFVATDAIR	2	VFVATDAIR2	18972.9	20170.7	14902.1
B4F7A3	B4F7A3	B4F7A3_RAT	Lgalsl	Galectin-like	1	VFVDGHQLFDFYHR	VFVDGHQLFDFYHR	3	VFVDGHQLFDFYHR3	55729.3	41123.7	30384.6
B4F7A3	B4F7A3	B4F7A3_RAT	Lgalsl	Galectin-like	1	VFVDGHQLFDFYHR	VFVDGHQLFDFYHR	4	VFVDGHQLFDFYHR4	51394	65930.5	65624.9
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	VFVDIEFTGDPHQFEQK	VFVDIEFTGDPHQFEQK	3	VFVDIEFTGDPHQFEQK3	30652.9	28441.5	21843.8
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	VFVESSETVDHQAAFTDSHLWK	VFVESSETVDHQAAFTDSHLWK	3	VFVESSETVDHQAAFTDSHLWK3	6667.23	5787.39	10999.6
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	VFVESSETVDHQAAFTDSHLWK	VFVESSETVDHQAAFTDSHLWK	4	VFVESSETVDHQAAFTDSHLWK4	8459.15	10244.9	6479.13
Q9ESC1	Q9ESC1	AGRL4_RAT	Adgrl4	Adhesion G protein-coupled receptor L4	1	VFVFDSVHMK	VFVFDSVHMK	2	VFVFDSVHMK2	30662.9	38669.2	25376.7
Q9ESC1	Q9ESC1	AGRL4_RAT	Adgrl4	Adhesion G protein-coupled receptor L4	1	VFVFDSVHMK	VFVFDSVHMK	3	VFVFDSVHMK3	116253	115173	138000
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	VFVGEEDPEAQSVTLR	VFVGEEDPEAQSVTLR	2	VFVGEEDPEAQSVTLR2	603235	576028	545065
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	VFVGEEDPEAQSVTLR	VFVGEEDPEAQSVTLR	3	VFVGEEDPEAQSVTLR3	312745	278932	293870
Q3SWU3	Q3SWU3	HNRDL_RAT	Hnrnpdl	Heterogeneous nuclear ribonucleoprotein D-like	1	VFVGGLSPDTSEEQIK	VFVGGLSPDTSEEQIK	2	VFVGGLSPDTSEEQIK2	7337.51		5567.64
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	VFVHYTGWLLDGTK	VFVHYTGWLLDGTK	3	VFVHYTGWLLDGTK3	17928.6	23789.4	11663.5
A0A8I6GAE6	A0A8I6GAE6	A0A8I6GAE6_RAT	Ddx19b	RNA helicase	1	VFVLDEADVMIATQGHQDQSIR	VFVLDEADVMIATQGHQDQSIR	3	VFVLDEADVMIATQGHQDQSIR3	1454.09	4721.05	9236.47
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	VFVLPCIQQIQR	VFVLPC(UniMod:4)IQQIQR	2	VFVLPC(UniMod:4)IQQIQR2	4767.81	7181.74	5100.26
G3V9L1	G3V9L1	G3V9L1_RAT	Tex2	Testis expressed 2	1	VFVMPNMDDVYIPIMHSAMDPR	VFVMPNMDDVYIPIMHSAMDPR	3	VFVMPNMDDVYIPIMHSAMDPR3	10914.7	6382.4	9050.3
A0A8I6AVP7	A0A8I6AVP7	A0A8I6AVP7_RAT	Odr4	Protein odr-4 homolog	1	VFVPLPGSTVMLCDYK	VFVPLPGSTVMLC(UniMod:4)DYK	2	VFVPLPGSTVMLC(UniMod:4)DYK2	7717.31	19723.2	9075.8
A0A8I6AVP7	A0A8I6AVP7	A0A8I6AVP7_RAT	Odr4	Protein odr-4 homolog	1	VFVPLPGSTVMLCDYK	VFVPLPGSTVMLC(UniMod:4)DYK	3	VFVPLPGSTVMLC(UniMod:4)DYK3	4132.04	1697.12	
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	VFVPTGFSAFPSELLHAPEK	VFVPTGFSAFPSELLHAPEK	3	VFVPTGFSAFPSELLHAPEK3	68687.3	71166.6	69069.1
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	VFVPTVHENLEIK	VFVPTVHENLEIK	2	VFVPTVHENLEIK2	11490.8	3672.63	3502.07
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	VFVPTVHENLEIK	VFVPTVHENLEIK	3	VFVPTVHENLEIK3	142653	147943	104474
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	VFVQGYEK	VFVQGYEK	2	VFVQGYEK2	45841.8	42288.1	42320.4
Q78E14	Q78E14	Q78E14_RAT	Obp3	Alpha-2u globulin PGCL4	1	VFVQHIDVLENSLGFTFR	VFVQHIDVLENSLGFTFR	3	VFVQHIDVLENSLGFTFR3	20709.3	10427.9	10426.2
P08461	A0A8I6B5J2;P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	0	VFVSPLAK	VFVSPLAK	2	VFVSPLAK2	169220	156150	174020
D4A0T9	D4A0T9	D4A0T9_RAT	Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	1	VFVSVAPQAR	VFVSVAPQAR	2	VFVSVAPQAR2	24346.1	15894.5	15479.9
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	VFVTLTCAFR	VFVTLTC(UniMod:4)AFR	2	VFVTLTC(UniMod:4)AFR2	64780.2	61833	58160.6
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VFYEEELDVPLVLFNEVLDHVLR	VFYEEELDVPLVLFNEVLDHVLR	3	VFYEEELDVPLVLFNEVLDHVLR3	2366.93		
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	VFYELQHSDKPVGTK	VFYELQHSDKPVGTK	3	VFYELQHSDKPVGTK3	29143.4	30228.2	19804.2
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	VFYELQHSDKPVGTK	VFYELQHSDKPVGTK	4	VFYELQHSDKPVGTK4	27323.1	26277	31195
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	VFYELQHSDKPVGTKK	VFYELQHSDKPVGTKK	4	VFYELQHSDKPVGTKK4		3285.21	
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	VFYHLTVDRPVIYDGSDFP	VFYHLTVDRPVIYDGSDFP	3	VFYHLTVDRPVIYDGSDFP3	67884.3	59064	59890.5
M0R8P6	D4AEJ5;M0R8P6	M0R8P6_RAT	Wwc3	Uncharacterized protein	0	VFYIDHNTR	VFYIDHNTR	3	VFYIDHNTR3	3852.8	5094.35	5663.02
P07687	P07687	HYEP_RAT	Ephx1	Epoxide hydrolase 1	1	VFYSIMR	VFYSIMR	2	VFYSIMR2	45948.4	46379.6	57369.5
D3ZHC4	D3ZHC4	D3ZHC4_RAT	Hebp2	Heme binding protein 2	1	VFYTAGYSSPFR	VFYTAGYSSPFR	2	VFYTAGYSSPFR2	16894.2	13336.9	15437.2
D3Z9G1	D3Z9G1	D3Z9G1_RAT	Fbxw17	F-box and WD-40 domain protein 17	1	VFYTQPLLHPSEDRLPASATLPIR	VFYTQPLLHPSEDRLPASATLPIR	4	VFYTQPLLHPSEDRLPASATLPIR4	3570.38	2046.55	4794.61
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	VGAAADHNYQSYILR	VGAAADHNYQSYILR	2	VGAAADHNYQSYILR2	1614.02		
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	VGAAADHNYQSYILR	VGAAADHNYQSYILR	3	VGAAADHNYQSYILR3	38330.9	46108.5	19287.3
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	VGAAEEELQK	VGAAEEELQK	2	VGAAEEELQK2	79528.7	49261.3	62894.1
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	VGAAGPAPGTGSGPLR	VGAAGPAPGTGSGPLR	2	VGAAGPAPGTGSGPLR2	56947.4	42685.1	56897
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	VGADITVLR	VGADITVLR	2	VGADITVLR2	104840	115379	94352.7
D4AAT7	D4AAT7	NNRD_RAT	Naxd	ATP-dependent (S)-NAD(P)H-hydrate dehydratase	1	VGADLTHVFCAR	VGADLTHVFC(UniMod:4)AR	3	VGADLTHVFC(UniMod:4)AR3	18107.8	20812.7	19808.3
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	VGADLVQCYHFGWSPNFPTCEGQVK	VGADLVQC(UniMod:4)YHFGWSPNFPTC(UniMod:4)EGQVK	3	VGADLVQC(UniMod:4)YHFGWSPNFPTC(UniMod:4)EGQVK3	113750	120430	104515
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	VGADLVQCYHFGWSPNFPTCEGQVK	VGADLVQC(UniMod:4)YHFGWSPNFPTC(UniMod:4)EGQVK	4	VGADLVQC(UniMod:4)YHFGWSPNFPTC(UniMod:4)EGQVK4		7719.87	
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	VGADNHVLPLDCVTLQTFLAK	VGADNHVLPLDC(UniMod:4)VTLQTFLAK	3	VGADNHVLPLDC(UniMod:4)VTLQTFLAK3	14651.7	10169.6	9670.54
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	VGAEDTDGIDMAYR	VGAEDTDGIDMAYR	2	VGAEDTDGIDMAYR2	6607.81	8608.34	2108.75
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	VGAFNVGK	VGAFNVGK	2	VGAFNVGK2	113088	144590	131516
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	VGAFSAAR	VGAFSAAR	1	VGAFSAAR1	6075.14	3586.34	
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	VGAFSAAR	VGAFSAAR	2	VGAFSAAR2	66719.7	69963	65057.3
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	VGAFSGLFNVAVMNLSGNCLR	VGAFSGLFNVAVMNLSGNC(UniMod:4)LR	3	VGAFSGLFNVAVMNLSGNC(UniMod:4)LR3	82616.8	70452.1	84646.6
P00507	P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	1	VGAFTVVCK	VGAFTVVC(UniMod:4)K	2	VGAFTVVC(UniMod:4)K2	390253	356371	403073
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	VGAGTQGGDEAQSQGDDR	VGAGTQGGDEAQSQGDDR	3	VGAGTQGGDEAQSQGDDR3			1781.6
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	VGAIPANALDDGQWSQGLISAAR	VGAIPANALDDGQWSQGLISAAR	3	VGAIPANALDDGQWSQGLISAAR3	39591.3	2.37016e+06	35939.9
A0A096MJT6	A0A096MJT6	A0A096MJT6_RAT	Bltp1	Similar to RIKEN cDNA D630029K19	1	VGAISINIPQHPATLHSMMVR	VGAISINIPQHPATLHSMMVR	4	VGAISINIPQHPATLHSMMVR4	6585.75	9353.04	10113.3
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	VGAPEESIR	VGAPEESIR	2	VGAPEESIR2	127932	125691	110234
O35547	O35547	ACSL4_RAT	Acsl4	Long-chain-fatty-acid--CoA ligase 4	1	VGAPLICCEIK	VGAPLIC(UniMod:4)C(UniMod:4)EIK	2	VGAPLIC(UniMod:4)C(UniMod:4)EIK2	14083.7	11931.3	9353.31
Q60587	Q60587	ECHB_RAT	Hadhb	Trifunctional enzyme subunit beta, mitochondrial	1	VGAPPLEK	VGAPPLEK	2	VGAPPLEK2	378270	348168	336137
P24155	P24155	THOP1_RAT	Thop1	Thimet oligopeptidase	1	VGAQDFEDVSYESTLK	VGAQDFEDVSYESTLK	2	VGAQDFEDVSYESTLK2		1412.2	
P98105	P98105	LYAM2_RAT	Sele	E-selectin	1	VGAQNLQCTSSGVWDNEKPSCK	VGAQNLQC(UniMod:4)TSSGVWDNEKPSC(UniMod:4)K	3	VGAQNLQC(UniMod:4)TSSGVWDNEKPSC(UniMod:4)K3	20319.9	21993.2	24691.5
D3ZJR1	D3ZJR1	D3ZJR1_RAT	Eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1	1	VGASEAALFLK	VGASEAALFLK	2	VGASEAALFLK2	15774.8	12484.6	15591.2
P00507	A0A8I6GJD2;P00507	AATM_RAT	Got2	Aspartate aminotransferase, mitochondrial	0	VGASFLQR	VGASFLQR	2	VGASFLQR2	488822	445081	455024
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	VGASNLPAGISLPASANLLLSTDSTR	VGASNLPAGISLPASANLLLSTDSTR	3	VGASNLPAGISLPASANLLLSTDSTR3	61566.8	41158.4	39982.2
Q6IRK9	Q6IRK9	CBPQ_RAT	Cpq	Carboxypeptidase Q	1	VGAVASLIR	VGAVASLIR	2	VGAVASLIR2	149455	252695	187423
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	VGAVLEQGQLQNTLHTQLQGALAGLGHEIR	VGAVLEQGQLQNTLHTQLQGALAGLGHEIR	4	VGAVLEQGQLQNTLHTQLQGALAGLGHEIR4	134360	153462	126800
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	VGAVNADK	VGAVNADK	1	VGAVNADK1	7111.17		10330.7
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	VGAVNADK	VGAVNADK	2	VGAVNADK2			30726.3
Q63081	Q63081	PDIA6_RAT	Pdia6	Protein disulfide-isomerase A6	1	VGAVNADKHQSLGGQYGVQGFPTIK	VGAVNADKHQSLGGQYGVQGFPTIK	4	VGAVNADKHQSLGGQYGVQGFPTIK4	1870.02	6084.86	7449.52
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	VGCIQIVYVHK	VGC(UniMod:4)IQIVYVHK	3	VGC(UniMod:4)IQIVYVHK3	3487.25		
Q7TSU1	D4A631;Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	0	VGCNPNEDVAIFAVDSLR	VGC(UniMod:4)NPNEDVAIFAVDSLR	3	VGC(UniMod:4)NPNEDVAIFAVDSLR3	29117.5	40629.6	19149.2
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	VGCVAAQNPK	VGC(UniMod:4)VAAQNPK	2	VGC(UniMod:4)VAAQNPK2	27451.4	27659.1	24966
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	VGCVDTR	VGC(UniMod:4)VDTR	2	VGC(UniMod:4)VDTR2	166113	157511	159206
P61312	P61312	ADM2_RAT	Adm2	Protein ADM2	1	VGCVLGTCQVQNLSHR	VGC(UniMod:4)VLGTC(UniMod:4)QVQNLSHR	3	VGC(UniMod:4)VLGTC(UniMod:4)QVQNLSHR3	8187	5382.27	9294.8
D3ZEJ9	D3ZEJ9	D3ZEJ9_RAT	RGD1310429	Similar to Protein Njmu-R1	1	VGCYYCLFQQEK	VGC(UniMod:4)YYC(UniMod:4)LFQQEK	2	VGC(UniMod:4)YYC(UniMod:4)LFQQEK2	16649	15935.7	14294
F7EUD8	F1LQF7;F7EUD8	F7EUD8_RAT	Trpc6	Transient receptor ion channel domain-containing protein	0	VGDALLLAISK	VGDALLLAISK	2	VGDALLLAISK2	33449.7	39691.7	32074.9
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	VGDDPAVWQLK	VGDDPAVWQLK	2	VGDDPAVWQLK2	2.63037e+06	2.61638e+06	2.67899e+06
P18395	P18395	CSDE1_RAT	Csde1	Cold shock domain-containing protein E1	1	VGDDVEFEVSSDRR	VGDDVEFEVSSDRR	3	VGDDVEFEVSSDRR3	11573.7		10032.9
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	VGDEPAPR	VGDEPAPR	2	VGDEPAPR2	250725	299304	286193
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	VGDFGDAINWPTPGEIAHK	VGDFGDAINWPTPGEIAHK	3	VGDFGDAINWPTPGEIAHK3	10165.2	16261.4	12956.8
Q63072	Q63072	BST1_RAT	Bst1	ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 2	1	VGDFLSWCR	VGDFLSWC(UniMod:4)R	2	VGDFLSWC(UniMod:4)R2	14566.1	12092.4	7148.33
Q4FZX7	Q4FZX7	SRPRB_RAT	Srprb	Signal recognition particle receptor subunit beta	1	VGDGAGGAFQPYLDSLR	VGDGAGGAFQPYLDSLR	2	VGDGAGGAFQPYLDSLR2	6284.84	3355.56	4038.02
A0A8I6A678	A0A8I6A678	A0A8I6A678_RAT	Snx2	Sorting nexin-2	1	VGDGMNAYMAYR	VGDGMNAYMAYR	2	VGDGMNAYMAYR2	5063.53	2097.37	4890.8
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	VGDGMSLGNDFDVFAHIGNDTSESR	VGDGMSLGNDFDVFAHIGNDTSESR	3	VGDGMSLGNDFDVFAHIGNDTSESR3	1801.33	7963.1	8801.74
D3ZLT7	D3ZLT7	D3ZLT7_RAT	Kiaa2013	Similar to RIKEN cDNA 2510039O18	1	VGDHQFLLYSGR	VGDHQFLLYSGR	3	VGDHQFLLYSGR3	16172.5	16793.3	34478.7
Q6P777	Q6P777	MB12A_RAT	Mvb12a	Multivesicular body subunit 12A	1	VGDIGGFAIWCK	VGDIGGFAIWC(UniMod:4)K	2	VGDIGGFAIWC(UniMod:4)K2	26642.6	18586.5	31830.6
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	VGDIVMVK	VGDIVMVK	2	VGDIVMVK2	88435.7	90169.1	100136
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	VGDLFQK	VGDLFQK	2	VGDLFQK2	41642.9	42856.7	34574.2
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	VGDLNTEQEDGGEMVHEVDMIIK	VGDLNTEQEDGGEMVHEVDMIIK	3	VGDLNTEQEDGGEMVHEVDMIIK3	158047	159875	150984
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	VGDLNTEQEDGGEMVHEVDMIIK	VGDLNTEQEDGGEMVHEVDMIIK	4	VGDLNTEQEDGGEMVHEVDMIIK4	10521.3	12514.4	13138
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	VGDLNTEQEDGGEMVHEVDMIIKHNK	VGDLNTEQEDGGEMVHEVDMIIKHNK	4	VGDLNTEQEDGGEMVHEVDMIIKHNK4	19806.7	11835.4	14403.1
D3ZUX7	D3ZUX7	D3ZUX7_RAT	Acsf3	Acyl-CoA synthetase family member 3	1	VGDLQEER	VGDLQEER	2	VGDLQEER2	9878.41	10969.5	6957.38
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	VGDNDFLEVR	VGDNDFLEVR	2	VGDNDFLEVR2	30164.6	26721.3	21005.2
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	VGDPQELNGITR	VGDPQELNGITR	2	VGDPQELNGITR2	36847.3	43744.3	39503.1
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	VGDPTAHPGSLFR	VGDPTAHPGSLFR	3	VGDPTAHPGSLFR3	53668.6	85921.5	66434.5
O88994	O88994	MARC2_RAT	Mtarc2	Mitochondrial amidoxime reducing component 2	1	VGDPVYR	VGDPVYR	2	VGDPVYR2	241240	302844	286218
D4A0T9	D4A0T9	D4A0T9_RAT	Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	1	VGDSEKPAMAGPCRPDDMSPVPEPCVR	VGDSEKPAMAGPC(UniMod:4)RPDDMSPVPEPC(UniMod:4)VR	4	VGDSEKPAMAGPC(UniMod:4)RPDDMSPVPEPC(UniMod:4)VR4	24858.8	28238.6	23082.1
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	VGDSLSFSCR	VGDSLSFSC(UniMod:4)R	2	VGDSLSFSC(UniMod:4)R2	113874	102266	114115
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	VGDSSLLIFVR	VGDSSLLIFVR	2	VGDSSLLIFVR2	30658.4	35300.3	26866.4
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	VGDTFILNLR	VGDTFILNLR	2	VGDTFILNLR2	110330	96801.2	73820.6
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	VGDTFILNLR	VGDTFILNLR	3	VGDTFILNLR3	13992.9	8639.95	12867.8
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	VGDTFILNLRTVGIPVPTFSHYYYMIISR	VGDTFILNLRTVGIPVPTFSHYYYMIISR	4	VGDTFILNLRTVGIPVPTFSHYYYMIISR4	20657.3	19799.3	12356.7
P08649	P08649	CO4_RAT	C4	Complement C4	1	VGDTFVLSLR	VGDTFVLSLR	2	VGDTFVLSLR2	166780	225516	150872
P08649	P08649	CO4_RAT	C4	Complement C4	1	VGDTFVLSLRTVGIPMPTFSHYYYMIISR	VGDTFVLSLRTVGIPMPTFSHYYYMIISR	4	VGDTFVLSLRTVGIPMPTFSHYYYMIISR4	35540.9	32882	40422.2
Q9R063	Q9R063	PRDX5_RAT	Prdx5	Peroxiredoxin-5, mitochondrial	1	VGDTIPSVEVFEGEPGK	VGDTIPSVEVFEGEPGK	2	VGDTIPSVEVFEGEPGK2	157435	151049	148750
Q9R063	Q9R063	PRDX5_RAT	Prdx5	Peroxiredoxin-5, mitochondrial	1	VGDTIPSVEVFEGEPGK	VGDTIPSVEVFEGEPGK	3	VGDTIPSVEVFEGEPGK3	1676.12	11989.7	6305.31
Q9R063	Q9R063	PRDX5_RAT	Prdx5	Peroxiredoxin-5, mitochondrial	1	VGDTIPSVEVFEGEPGKK	VGDTIPSVEVFEGEPGKK	2	VGDTIPSVEVFEGEPGKK2	47479.9	37929.8	39050.3
Q9R063	Q9R063	PRDX5_RAT	Prdx5	Peroxiredoxin-5, mitochondrial	1	VGDTIPSVEVFEGEPGKK	VGDTIPSVEVFEGEPGKK	3	VGDTIPSVEVFEGEPGKK3	398960	362929	429810
A0A8I6A8Y4	A0A8I6A8Y4	A0A8I6A8Y4_RAT	Mtres1	Mitochondrial transcription rescue factor 1	1	VGDTLDLLMGENK	VGDTLDLLMGENK	2	VGDTLDLLMGENK2	4423.38	4149.81	7282.55
Q9QZ81	Q9QZ81	AGO2_RAT	Ago2	Protein argonaute-2	1	VGDTVLGMATQCVQMK	VGDTVLGMATQC(UniMod:4)VQMK	2	VGDTVLGMATQC(UniMod:4)VQMK2	2008.63		
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	VGDTYER	VGDTYER	2	VGDTYER2	835211	795453	802126
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	VGDTYERPK	VGDTYERPK	2	VGDTYERPK2	1.35174e+07	1.66331e+07	1.36854e+07
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	VGDTYERPKDSMIWDCTCIGAGR	VGDTYERPKDSMIWDC(UniMod:4)TC(UniMod:4)IGAGR	3	VGDTYERPKDSMIWDC(UniMod:4)TC(UniMod:4)IGAGR3	3738.81	8976.2	
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	VGDTYERPKDSMIWDCTCIGAGR	VGDTYERPKDSMIWDC(UniMod:4)TC(UniMod:4)IGAGR	4	VGDTYERPKDSMIWDC(UniMod:4)TC(UniMod:4)IGAGR4	78436.5	73129.8	103648
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	VGDVVLPPWASSPEDFIQK	VGDVVLPPWASSPEDFIQK	3	VGDVVLPPWASSPEDFIQK3	103198	120627	113870
Q6PDU1	Q6PDU1	SRSF2_RAT	Srsf2	Serine/arginine-rich splicing factor 2	1	VGDVYIPR	VGDVYIPR	2	VGDVYIPR2	27133.1	27316.9	19909.6
P51111	P51111	HD_RAT	Htt	Huntingtin	1	VGDWLGTIR	VGDWLGTIR	2	VGDWLGTIR2	52767.8	53259.5	57254.9
Q9R1T3	Q9R1T3	CATZ_RAT	Ctsz	Cathepsin Z	1	VGDYGSLSGR	VGDYGSLSGR	2	VGDYGSLSGR2	132579	117357	145496
D3Z7Z5	D3Z7Z5	D3Z7Z5_RAT	Ranbp10	RAN binding protein 10	1	VGEAIETTQR	VGEAIETTQR	2	VGEAIETTQR2	3244.13	4566.32	6428.67
D3ZXY4	D3ZXY4	D3ZXY4_RAT	Aldh8a1	Aldehyde dehydrogenase 8 family, member A1	1	VGEALVSHPEVPVISFTGSQPTAER	VGEALVSHPEVPVISFTGSQPTAER	3	VGEALVSHPEVPVISFTGSQPTAER3		7365.49	3921.85
Q5BK06	Q5BK06	CCDB1_RAT	Ccndbp1	Cyclin-D1-binding protein 1	1	VGEAQETAEEFNR	VGEAQETAEEFNR	2	VGEAQETAEEFNR2	5511.7	6072.23	6917.28
P11507	P18596;P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	0	VGEATETALTCLVEK	VGEATETALTC(UniMod:4)LVEK	2	VGEATETALTC(UniMod:4)LVEK2	1.12517e+06	1.19008e+06	1.31314e+06
P11507	P18596;P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	0	VGEATETALTCLVEK	VGEATETALTC(UniMod:4)LVEK	3	VGEATETALTC(UniMod:4)LVEK3	83825.6	90001.7	69524.6
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	VGECSCQVSLMLHK	VGEC(UniMod:4)SC(UniMod:4)QVSLMLHK	3	VGEC(UniMod:4)SC(UniMod:4)QVSLMLHK3	52037.4	76453.2	83014.7
D3ZP13	D3ZP13	D3ZP13_RAT	Qsox2	Sulfhydryl oxidase	1	VGEDAVWLLDSGSVR	VGEDAVWLLDSGSVR	2	VGEDAVWLLDSGSVR2	15149.8	9603.9	10594.1
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	VGEDVSLVLGIVAK	VGEDVSLVLGIVAK	2	VGEDVSLVLGIVAK2	4119.42	8133.71	
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	VGEFFNHVIWK	VGEFFNHVIWK	2	VGEFFNHVIWK2	15130.5	12693	12244.7
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	VGEFFNHVIWK	VGEFFNHVIWK	3	VGEFFNHVIWK3	346645	298476	331609
P11232	P11232	THIO_RAT	Txn	Thioredoxin	1	VGEFSGANK	VGEFSGANK	1	VGEFSGANK1	3645.96	3811.45	3647.32
P11232	P11232	THIO_RAT	Txn	Thioredoxin	1	VGEFSGANK	VGEFSGANK	2	VGEFSGANK2	795726	857012	813775
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	VGEGGSSSVDFK	VGEGGSSSVDFK	2	VGEGGSSSVDFK2	25030.4	17951	18376
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	VGEGTQVLEMPFK	VGEGTQVLEMPFK	2	VGEGTQVLEMPFK2	200204	164332	164419
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	VGEGTQVLEMPFKGDDITMVLILPKPEK	VGEGTQVLEMPFKGDDITMVLILPKPEK	4	VGEGTQVLEMPFKGDDITMVLILPKPEK4	350027	286981	335815
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	VGEIEFEGLMR	VGEIEFEGLMR	2	VGEIEFEGLMR2	170956	179950	183736
P42667	P42667	SC11A_RAT	Sec11a	Signal peptidase complex catalytic subunit SEC11A	1	VGEIVVFR	VGEIVVFR	2	VGEIVVFR2	174540	189246	181338
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	VGELCAGK	VGELC(UniMod:4)AGK	1	VGELC(UniMod:4)AGK1	15611.1	9772.33	8904.69
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	VGELCAGK	VGELC(UniMod:4)AGK	2	VGELC(UniMod:4)AGK2	2.20316e+06	1.97932e+06	2.39073e+06
Q01986	Q01986	MP2K1_RAT	Map2k1	Dual specificity mitogen-activated protein kinase kinase 1	1	VGELKDDDFEK	VGELKDDDFEK	3	VGELKDDDFEK3	25127.3	32193	24585.3
P36506	P36506	MP2K2_RAT	Map2k2	Dual specificity mitogen-activated protein kinase kinase 2	1	VGELKDDDFER	VGELKDDDFER	3	VGELKDDDFER3	1726.61	4833.8	8887.21
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	VGELPSETCNDFHPMFFTHDR	VGELPSETC(UniMod:4)NDFHPMFFTHDR	4	VGELPSETC(UniMod:4)NDFHPMFFTHDR4	5499.69		
Q4V8I7	Q4V8I7	LRC8A_RAT	Lrrc8a	Volume-regulated anion channel subunit LRRC8A	1	VGELTNLTQIELR	VGELTNLTQIELR	2	VGELTNLTQIELR2	10543.4	19416.3	8980.67
D4A529	D4A529	D4A529_RAT	She	Src homology 2 domain containing E	1	VGENDGYMEPYDAQQMITEIR	VGENDGYMEPYDAQQMITEIR	3	VGENDGYMEPYDAQQMITEIR3	9599.25	9366.73	12318.6
D4A709	D4A709	D4A709_RAT	Tubgcp6	Tubulin, gamma complex associated protein 6	1	VGENVSDVAPSRPR	VGENVSDVAPSRPR	3	VGENVSDVAPSRPR3	22060.8	32279.6	20905.6
D3ZMV1	D3ZMV1	D3ZMV1_RAT	Sla2	Src-like-adaptor 2	1	VGEPLTIISEDGDWWTVQSEVSGR	VGEPLTIISEDGDWWTVQSEVSGR	3	VGEPLTIISEDGDWWTVQSEVSGR3	9628.94	5908.36	7008.91
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	VGEPTYSCR	VGEPTYSC(UniMod:4)R	2	VGEPTYSC(UniMod:4)R2	26602.7	21761.4	34385.2
A0A8I6A8Y6	A0A8I6A8Y6	A0A8I6A8Y6_RAT	Sf3b2	Splicing factor 3b, subunit 2	1	VGEPVALSEEER	VGEPVALSEEER	2	VGEPVALSEEER2	16535	8218.52	5160.87
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	VGEQAQVVIIDMNDPSNPIR	VGEQAQVVIIDMNDPSNPIR	3	VGEQAQVVIIDMNDPSNPIR3	101428	87236.6	96204.8
D3ZE15	D3ZE15;F1LZC5	D3ZE15_RAT	Ndufa13	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13	0	VGESMFHTTR	VGESMFHTTR	2	VGESMFHTTR2	11050.4	8921.76	6068.77
D3ZE15	D3ZE15;F1LZC5	D3ZE15_RAT	Ndufa13	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13	0	VGESMFHTTR	VGESMFHTTR	3	VGESMFHTTR3	60922.6	64236.4	61269
B0BNB0	B0BNB0	B0BNB0_RAT	Golt1b	Golgi transport 1B	1	VGESNNMV	VGESNNMV	1	VGESNNMV1	7297.68	11526.9	
B0BNB0	B0BNB0	B0BNB0_RAT	Golt1b	Golgi transport 1B	1	VGESNNMV	VGESNNMV	2	VGESNNMV2	4151.19		3704.26
O70436	O70436	SMAD2_RAT	Smad2	Mothers against decapentaplegic homolog 2	1	VGETFHASQPSLTVDGFTDPSNSER	VGETFHASQPSLTVDGFTDPSNSER	3	VGETFHASQPSLTVDGFTDPSNSER3	10076.8	4834.63	6737.59
P19234	P19234	NDUV2_RAT	Ndufv2	NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial	1	VGETTPDK	VGETTPDK	2	VGETTPDK2			33385.6
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	VGEVCHITCKPEYAYGSAGSPPK	VGEVC(UniMod:4)HITC(UniMod:4)KPEYAYGSAGSPPK	3	VGEVC(UniMod:4)HITC(UniMod:4)KPEYAYGSAGSPPK3	1155.91		
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	VGEVCHITCKPEYAYGSAGSPPK	VGEVC(UniMod:4)HITC(UniMod:4)KPEYAYGSAGSPPK	4	VGEVC(UniMod:4)HITC(UniMod:4)KPEYAYGSAGSPPK4	923451	924999	1.11783e+06
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	VGEVIVTK	VGEVIVTK	1	VGEVIVTK1	3292.54	1149.35	4738.77
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	VGEVIVTK	VGEVIVTK	2	VGEVIVTK2	687657	650649	682322
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	VGFEEAGCK	VGFEEAGC(UniMod:4)K	2	VGFEEAGC(UniMod:4)K2	4609.23		5736.37
P25093	P25093	FAAA_RAT	Fah	Fumarylacetoacetase	1	VGFGQCAGK	VGFGQC(UniMod:4)AGK	2	VGFGQC(UniMod:4)AGK2	3088.37	6871.64	5296.34
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	VGFGRPDGEYWLGLEPVHQVTSR	VGFGRPDGEYWLGLEPVHQVTSR	3	VGFGRPDGEYWLGLEPVHQVTSR3	82377.4	84114.7	70428.3
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	VGFGRPDGEYWLGLEPVHQVTSR	VGFGRPDGEYWLGLEPVHQVTSR	4	VGFGRPDGEYWLGLEPVHQVTSR4	336635	343386	355386
D4A224	D4A224	D4A224_RAT	Ric1	Protein RIC1 homolog	1	VGFITPVSSR	VGFITPVSSR	2	VGFITPVSSR2	4549.65	5251.71	7309.49
G3V9S9	G3V9S9	G3V9S9_RAT	Sec24d	SEC24 homolog D, COPII coat complex component	1	VGFITYNK	VGFITYNK	2	VGFITYNK2	5628.76	4593.42	4910.02
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	VGFLKPVSPK	VGFLKPVSPK	2	VGFLKPVSPK2	20946.1	14435.3	14949.1
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	VGFLKPVSPKPTSLTK	VGFLKPVSPKPTSLTK	2	VGFLKPVSPKPTSLTK2	11607.2	7245.92	14134
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	VGFLKPVSPKPTSLTK	VGFLKPVSPKPTSLTK	3	VGFLKPVSPKPTSLTK3	249418	245066	240954
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	VGFLKPVSPKPTSLTK	VGFLKPVSPKPTSLTK	4	VGFLKPVSPKPTSLTK4	1.10991e+06	1.28063e+06	1.2958e+06
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	VGFLPPPGK	VGFLPPPGK	2	VGFLPPPGK2	63811.1	85692.4	70306.4
B2RYI0	B2RYI0	WDR91_RAT	Wdr91	WD repeat-containing protein 91	1	VGFLSSLLPQSK	VGFLSSLLPQSK	2	VGFLSSLLPQSK2	10609.3	9760.6	5396.69
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	VGFNHGPLTAGVIGTTK	VGFNHGPLTAGVIGTTK	3	VGFNHGPLTAGVIGTTK3	19771.9	13976.4	26651.3
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	VGFQYEGTYK	VGFQYEGTYK	2	VGFQYEGTYK2	35814.4	37608.4	35524.8
Q6P6V6	Q6P6V6	GP108_RAT	Gpr108	Protein GPR108	1	VGFSLSR	VGFSLSR	2	VGFSLSR2	58517.9	52933.1	57729.4
A0A8I6AC38	A0A8I6AC38	A0A8I6AC38_RAT	Wnk2	non-specific serine/threonine protein kinase	1	VGFVDNTIK	VGFVDNTIK	2	VGFVDNTIK2	2272.73	2639.58	6951.07
Q5PQJ6	Q5PQJ6	P5CR3_RAT	Pycr3	Pyrroline-5-carboxylate reductase 3	1	VGFVGAGR	VGFVGAGR	2	VGFVGAGR2	17872.4	10319.9	13142.8
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	VGFVTYNK	VGFVTYNK	2	VGFVTYNK2	8330.82	12089.7	4955.15
A0A8I6ABF2	A0A8I6ABF2	A0A8I6ABF2_RAT	Lmf1	Lipase maturation factor	1	VGGAEHSPASPSALTR	VGGAEHSPASPSALTR	3	VGGAEHSPASPSALTR3	27415.9	20829.7	29047.5
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VGGAPGCDQCQPEPCPQPCTPEQQEPFR	VGGAPGC(UniMod:4)DQC(UniMod:4)QPEPC(UniMod:4)PQPC(UniMod:4)TPEQQEPFR	4	VGGAPGC(UniMod:4)DQC(UniMod:4)QPEPC(UniMod:4)PQPC(UniMod:4)TPEQQEPFR4	31121.3	24769.2	34645.1
O55043	O55043	ARHG7_RAT	Arhgef7	Rho guanine nucleotide exchange factor 7	1	VGGCFLSLMPQMR	VGGC(UniMod:4)FLSLMPQMR	2	VGGC(UniMod:4)FLSLMPQMR2	7776.59	8777.76	9171.77
Q5XXR3	Q5XXR3	ARHG6_RAT	Arhgef6	Rho guanine nucleotide exchange factor 6	1	VGGCLLNLMPHFK	VGGC(UniMod:4)LLNLMPHFK	3	VGGC(UniMod:4)LLNLMPHFK3	8788.49	6647.46	5010.03
D3Z8Q7	D3Z8Q7	D3Z8Q7_RAT	Ciao2b	Cytosolic iron-sulfur assembly component 2B	1	VGGGGGGGGGGLLENANPLIYER	VGGGGGGGGGGLLENANPLIYER	3	VGGGGGGGGGGLLENANPLIYER3	4187.79		
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	VGGGWDTLEHYLDK	VGGGWDTLEHYLDK	2	VGGGWDTLEHYLDK2	6357.02	6651.89	5596.42
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	VGGGWDTLEHYLDK	VGGGWDTLEHYLDK	3	VGGGWDTLEHYLDK3	33668	47659.1	33153.2
D3ZHV2	D3ZHV2;A0A8I5ZQD4	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	0	VGGGWMALDEFLVK	VGGGWMALDEFLVK	2	VGGGWMALDEFLVK2	25801.2	27023.9	24657.3
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	VGGHALPK	VGGHALPK	2	VGGHALPK2		10797.2	9551.25
F1M0B5	F1M0B5	F1M0B5_RAT	Cd84	CD84 molecule	1	VGGHELTVTQDIYK	VGGHELTVTQDIYK	2	VGGHELTVTQDIYK2	12368.1	7209.32	8646.84
F1M0B5	F1M0B5	F1M0B5_RAT	Cd84	CD84 molecule	1	VGGHELTVTQDIYK	VGGHELTVTQDIYK	3	VGGHELTVTQDIYK3	144551	127923	154362
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	VGGILPEK	VGGILPEK	2	VGGILPEK2	38008.6	39909	36880.8
A2RRU1	A2RRU1	GYS1_RAT	Gys1	Glycogen [starch] synthase, muscle	1	VGGIYTVLQTK	VGGIYTVLQTK	2	VGGIYTVLQTK2	63144.5	67226.5	65224.2
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	VGGNLLAPR	VGGNLLAPR	2	VGGNLLAPR2	32996.8	22649.3	36750.3
Q62985	Q62985	SH2B1_RAT	Sh2b1	SH2B adapter protein 1	1	VGGPLAVLGPSR	VGGPLAVLGPSR	2	VGGPLAVLGPSR2	6747.1	8557.61	6926.16
P47816	P47816	PDCD2_RAT	Pdcd2	Programmed cell death protein 2	1	VGGRPAWLALAELPGPGALACAR	VGGRPAWLALAELPGPGALAC(UniMod:4)AR	3	VGGRPAWLALAELPGPGALAC(UniMod:4)AR3	13599.7	20152.7	21554.7
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	VGGSSVDLHR	VGGSSVDLHR	2	VGGSSVDLHR2	4615.84	4971.6	5761.09
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	VGGTDGHEAFLLTEGSEEK	VGGTDGHEAFLLTEGSEEK	3	VGGTDGHEAFLLTEGSEEK3	33022.4	23336.8	18772.9
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	VGGTDGHEAFLLTEGSEEKK	VGGTDGHEAFLLTEGSEEKK	4	VGGTDGHEAFLLTEGSEEKK4	14670.3	12826.6	7963.52
P63039	P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	1	VGGTSDVEVNEK	VGGTSDVEVNEK	2	VGGTSDVEVNEK2	531780	465801	443642
P63039	P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	1	VGGTSDVEVNEKK	VGGTSDVEVNEKK	3	VGGTSDVEVNEKK3	3834.92	13932.6	17456.8
P13221	P13221	AATC_RAT	Got1	Aspartate aminotransferase, cytoplasmic	1	VGGVQSLGGTGALR	VGGVQSLGGTGALR	2	VGGVQSLGGTGALR2	31675.5	23633	21594.5
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	VGGVTHLVGPVTMVLQGGPR	VGGVTHLVGPVTMVLQGGPR	3	VGGVTHLVGPVTMVLQGGPR3	4745.86	5511.68	4035.1
P18484	P18484;A0A8I6A4J2	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	0	VGGYILGEFGNLIAGDPR	VGGYILGEFGNLIAGDPR	2	VGGYILGEFGNLIAGDPR2	19810.1	10965.1	
P18484	P18484;A0A8I6A4J2	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	0	VGGYILGEFGNLIAGDPR	VGGYILGEFGNLIAGDPR	3	VGGYILGEFGNLIAGDPR3	9516.09	4645.12	18272.3
Q69BT7	Q69BT7	TPPC4_RAT	Trappc4	Trafficking protein particle complex subunit 4	1	VGHAVLAINGMDVNGK	VGHAVLAINGMDVNGK	3	VGHAVLAINGMDVNGK3	3562.78	5603.64	
D3ZCQ2	D3ZCQ2	D3ZCQ2_RAT	Alg11	GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase	1	VGHCTNIVYPPCDVQTFLDIPLHEK	VGHC(UniMod:4)TNIVYPPC(UniMod:4)DVQTFLDIPLHEK	4	VGHC(UniMod:4)TNIVYPPC(UniMod:4)DVQTFLDIPLHEK4	11452.8	8824.62	6867.83
Q63100	Q63100	DC1I1_RAT	Dync1i1	Cytoplasmic dynein 1 intermediate chain 1	1	VGHDSELENQDK	VGHDSELENQDK	2	VGHDSELENQDK2	4020.4		
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	VGHDYQWIGLNDK	VGHDYQWIGLNDK	3	VGHDYQWIGLNDK3	64787.5	55284.6	54977.1
D4A4T0	D4A4T0	D4A4T0_RAT	Stub1	STIP1 homology and U-box containing protein 1	1	VGHFDPVTR	VGHFDPVTR	2	VGHFDPVTR2	6989.19	3473.36	2642.12
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	VGHSELVGEIIR	VGHSELVGEIIR	2	VGHSELVGEIIR2	3378.05	9457.35	4791.27
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	VGHSELVGEIIR	VGHSELVGEIIR	3	VGHSELVGEIIR3	128773	173248	161722
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	VGHSTAHDEIIPMSIR	VGHSTAHDEIIPMSIR	2	VGHSTAHDEIIPMSIR2	3644.63		
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	VGHSTAHDEIIPMSIR	VGHSTAHDEIIPMSIR	3	VGHSTAHDEIIPMSIR3	72215.9	67382	78414.4
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	VGHSTAHDEIIPMSIR	VGHSTAHDEIIPMSIR	4	VGHSTAHDEIIPMSIR4	291234	313268	347989
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	VGIAEGHK	VGIAEGHK	2	VGIAEGHK2	85928.2		99419.8
M0RC54	M0RC54	M0RC54_RAT	Bod1l1	Biorientation of chromosomes in cell division 1-like 1	1	VGIALAGK	VGIALAGK	1	VGIALAGK1	111881	85835	69047.6
Q68FS8	Q68FS8	Q68FS8_RAT	Rtca	RNA 3'-terminal-phosphate cyclase (ATP)	1	VGIEAAEMLLANLR	VGIEAAEMLLANLR	2	VGIEAAEMLLANLR2	9902.86	6751.05	10928.7
Q68FS8	Q68FS8	Q68FS8_RAT	Rtca	RNA 3'-terminal-phosphate cyclase (ATP)	1	VGIEAAEMLLANLR	VGIEAAEMLLANLR	3	VGIEAAEMLLANLR3	7435.26	6405.5	15658.8
Q10473	Q10473	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	1	VGIFNCHGMGGNQVFSYTANK	VGIFNC(UniMod:4)HGMGGNQVFSYTANK	3	VGIFNC(UniMod:4)HGMGGNQVFSYTANK3	51112.8	35675.4	45211.8
D4AEP0	D4AEP0	D4AEP0_RAT	Adss	Adenylosuccinate synthetase isozyme 2	1	VGIGAFPTEQDNEIGELLQTR	VGIGAFPTEQDNEIGELLQTR	3	VGIGAFPTEQDNEIGELLQTR3	7888.61	13731.1	
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	VGIITWHPTAR	VGIITWHPTAR	2	VGIITWHPTAR2	42069.2	29334.6	32448.6
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	VGIITWHPTAR	VGIITWHPTAR	3	VGIITWHPTAR3	1.02475e+06	860755	880003
Q68FS1	Q68FS1	NUBP2_RAT	Nubp2	Cytosolic Fe-S cluster assembly factor NUBP2	1	VGILDVDLCGPSIPHMLHAQGK	VGILDVDLC(UniMod:4)GPSIPHMLHAQGK	4	VGILDVDLC(UniMod:4)GPSIPHMLHAQGK4	12742.2	9791.33	10858.4
P47853	P47853	PGS1_RAT	Bgn	Biglycan	1	VGINDFCPMGFGVK	VGINDFC(UniMod:4)PMGFGVK	2	VGINDFC(UniMod:4)PMGFGVK2	100648	106414	121423
Q5XIF6	P68370;Q5XIF6;Q68FR8;Q6P9V9;Q6AY56	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	VGINYQPPTVVPGGDLAK	VGINYQPPTVVPGGDLAK	2	VGINYQPPTVVPGGDLAK2	34221.2	49197.8	44583.8
Q5XIF6	P68370;Q5XIF6;Q68FR8;Q6P9V9;Q6AY56	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	VGINYQPPTVVPGGDLAK	VGINYQPPTVVPGGDLAK	3	VGINYQPPTVVPGGDLAK3	1.06528e+07	1.20975e+07	1.3017e+07
Q5XIF6	P68370;Q5XIF6;Q68FR8;Q6P9V9;Q6AY56	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	VGINYQPPTVVPGGDLAKVQR	VGINYQPPTVVPGGDLAKVQR	3	VGINYQPPTVVPGGDLAKVQR3	12566.2	10482.2	11918.5
Q6AYZ1	Q6AYZ1	TBA1C_RAT	Tuba1c	Tubulin alpha-1C chain	1	VGINYQPPTVVPGGDLAR	VGINYQPPTVVPGGDLAR	2	VGINYQPPTVVPGGDLAR2	4.08384e+06	4.36441e+06	4.06112e+06
Q6AYZ1	Q6AYZ1	TBA1C_RAT	Tuba1c	Tubulin alpha-1C chain	1	VGINYQPPTVVPGGDLAR	VGINYQPPTVVPGGDLAR	3	VGINYQPPTVVPGGDLAR3	947939	1.04489e+06	1.19294e+06
Q9JLU4	Q9JLU4	SHAN3_RAT	Shank3	SH3 and multiple ankyrin repeat domains protein 3	1	VGIPDLQQTK	VGIPDLQQTK	2	VGIPDLQQTK2	23352.3	23700.8	19242.2
D3ZXY4	D3ZXY4	D3ZXY4_RAT	Aldh8a1	Aldehyde dehydrogenase 8 family, member A1	1	VGIPSDPSANMGALISK	VGIPSDPSANMGALISK	2	VGIPSDPSANMGALISK2	6287.95	11539.1	
Q63965	Q63965	SFXN1_RAT	Sfxn1	Sideroflexin-1	1	VGIPVTDENGTR	VGIPVTDENGTR	2	VGIPVTDENGTR2	669551	682623	715284
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	VGITLFTVSHR	VGITLFTVSHR	2	VGITLFTVSHR2	2394.6	1750.9	4399.05
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	VGITLFTVSHR	VGITLFTVSHR	3	VGITLFTVSHR3	31938.4	31801	19891.1
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	VGIVAWHPTAR	VGIVAWHPTAR	2	VGIVAWHPTAR2	19257.6	11011	14545.5
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	VGIVAWHPTAR	VGIVAWHPTAR	3	VGIVAWHPTAR3	386102	388880	368268
Q6P6R2	Q6P6R2;A0A8I6A931	DLDH_RAT	Dld	Dihydrolipoyl dehydrogenase, mitochondrial	0	VGKFPFAANSR	VGKFPFAANSR	3	VGKFPFAANSR3	5217.81	7556.66	5732.59
A0A0G2K0I6	A0A0G2K0I6	A0A0G2K0I6_RAT	Cdh5	Cadherin 5	1	VGKPLGSLSVEDPDEPQNR	VGKPLGSLSVEDPDEPQNR	3	VGKPLGSLSVEDPDEPQNR3	22181.8	12724.2	13983.5
Q6P7Q1	Q6P7Q1	BABA2_RAT	Babam2	BRISC and BRCA1-A complex member 2	1	VGLDATNCLR	VGLDATNC(UniMod:4)LR	2	VGLDATNC(UniMod:4)LR2	109912	91829.1	105857
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	VGLDDLPLMAVPPYR	VGLDDLPLMAVPPYR	2	VGLDDLPLMAVPPYR2	19992.3	24174.8	22724.7
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	VGLDDLPLMAVPPYR	VGLDDLPLMAVPPYR	3	VGLDDLPLMAVPPYR3	13417.9	6779.99	11331.5
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	VGLDWACSMAEILR	VGLDWAC(UniMod:4)SMAEILR	2	VGLDWAC(UniMod:4)SMAEILR2	12052.1	6556.76	13170.2
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	VGLELLR	VGLELLR	2	VGLELLR2	12746.5	10230	8355.32
Q5BK49	Q5BK49	TACT_RAT	Cd96	T-cell surface protein tactile	1	VGLGADYGLR	VGLGADYGLR	2	VGLGADYGLR2	20008.3	28407.3	35257
Q9R1Z0	Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	1	VGLGFELEA	VGLGFELEA	1	VGLGFELEA1	79795.2	62622.1	77361.2
Q9R1Z0	Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	1	VGLGFELEA	VGLGFELEA	2	VGLGFELEA2	18463.3	17280	15291.8
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	VGLGGMEAK	VGLGGMEAK	2	VGLGGMEAK2	42998.6	37959.1	49944.9
Q497B0	Q497B0	NIT2_RAT	Nit2	Omega-amidase NIT2	1	VGLGICYDMR	VGLGIC(UniMod:4)YDMR	2	VGLGIC(UniMod:4)YDMR2	3278.13	6656.67	4886.35
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	VGLGLGYLELPQINYK	VGLGLGYLELPQINYK	2	VGLGLGYLELPQINYK2	359287	493438	429396
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	VGLGLGYLELPQINYK	VGLGLGYLELPQINYK	3	VGLGLGYLELPQINYK3	73424.8	127622	90862
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	VGLIGSCTNSSYEDMGR	VGLIGSC(UniMod:4)TNSSYEDMGR	2	VGLIGSC(UniMod:4)TNSSYEDMGR2	132658	129817	144634
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	VGLIGSCTNSSYEDMGR	VGLIGSC(UniMod:4)TNSSYEDMGR	3	VGLIGSC(UniMod:4)TNSSYEDMGR3	5510.81	9062.09	7554.71
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	VGLLAGQPAVTVR	VGLLAGQPAVTVR	2	VGLLAGQPAVTVR2	7834.42		1703.9
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	VGLLATLQDTQK	VGLLATLQDTQK	2	VGLLATLQDTQK2	39901.9	32875.4	38480.4
P46413	P46413	GSHB_RAT	Gss	Glutathione synthetase	1	VGLLEALLPGQPEAVAR	VGLLEALLPGQPEAVAR	2	VGLLEALLPGQPEAVAR2	6877.3	6274.7	5903.67
Q7TSN4	Q7TSN4	PIGW_RAT	Pigw	Phosphatidylinositol-glycan biosynthesis class W protein	1	VGLLNANR	VGLLNANR	2	VGLLNANR2	6598.3	5706.56	9307.09
F1LXS3	F1LXS3	F1LXS3_RAT	Matn2	Matrilin 2	1	VGLLQYGSTVK	VGLLQYGSTVK	2	VGLLQYGSTVK2	5591.14	3295.64	4028.58
F1LXS3	F1LXS3	F1LXS3_RAT	Matn2	Matrilin 2	1	VGLLQYSTQVR	VGLLQYSTQVR	2	VGLLQYSTQVR2	4949.6		1061
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	VGLLSFK	VGLLSFK	2	VGLLSFK2	352254	374356	362227
Q6AYS6	Q6AYS6	SNX17_RAT	Snx17	Sorting nexin-17	1	VGLNLLYAQTVSDIEHGWILVTK	VGLNLLYAQTVSDIEHGWILVTK	3	VGLNLLYAQTVSDIEHGWILVTK3		7236.1	2551.09
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VGLPDFHIPDNLFLK	VGLPDFHIPDNLFLK	2	VGLPDFHIPDNLFLK2	813507	851554	840502
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VGLPDFHIPDNLFLK	VGLPDFHIPDNLFLK	3	VGLPDFHIPDNLFLK3	3.62553e+06	5.06252e+06	4.46364e+06
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	VGLQVVAVK	VGLQVVAVK	1	VGLQVVAVK1	1831.55		2920.84
P63039	A0A8I6ACT0;P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	0	VGLQVVAVK	VGLQVVAVK	2	VGLQVVAVK2	732177	818587	805228
F7EUH5	F7EUH5	F7EUH5_RAT	Plxdc2	Plexin domain containing 2	1	VGLSDAFVVVHR	VGLSDAFVVVHR	2	VGLSDAFVVVHR2	34281.3	34302.9	41950.6
F7EUH5	F7EUH5	F7EUH5_RAT	Plxdc2	Plexin domain containing 2	1	VGLSDAFVVVHR	VGLSDAFVVVHR	3	VGLSDAFVVVHR3	843763	793308	866598
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	VGLSDLYNGQILETIGGK	VGLSDLYNGQILETIGGK	2	VGLSDLYNGQILETIGGK2	18034.6	14453	12482.4
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	VGLSDLYNGQILETIGGK	VGLSDLYNGQILETIGGK	3	VGLSDLYNGQILETIGGK3	3492.74	6912.42	13412.6
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	VGLTHTMEHEDVIQIVK	VGLTHTMEHEDVIQIVK	3	VGLTHTMEHEDVIQIVK3	4466.05	5794.11	5559.9
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	VGLTHTMEHEDVIQIVK	VGLTHTMEHEDVIQIVK	4	VGLTHTMEHEDVIQIVK4	12934.8	21414.9	18872.6
P09895	P09895	RL5_RAT	Rpl5	Large ribosomal subunit protein uL18	1	VGLTNYAAAYCTGLLLAR	VGLTNYAAAYC(UniMod:4)TGLLLAR	2	VGLTNYAAAYC(UniMod:4)TGLLLAR2	5476.16	5180.17	4145.21
P09895	P09895	RL5_RAT	Rpl5	Large ribosomal subunit protein uL18	1	VGLTNYAAAYCTGLLLAR	VGLTNYAAAYC(UniMod:4)TGLLLAR	3	VGLTNYAAAYC(UniMod:4)TGLLLAR3	9131.12	2105.87	4801.07
M0R3L8	M0R3L8	M0R3L8_RAT	Gba	Glucosylceramidase	1	VGLVASEK	VGLVASEK	2	VGLVASEK2	121040	77358.2	101691
P01026	P01026	CO3_RAT	C3	Complement C3	1	VGLVAVDK	VGLVAVDK	1	VGLVAVDK1	12817.5	29701.3	2592.42
P01026	P01026	CO3_RAT	C3	Complement C3	1	VGLVAVDK	VGLVAVDK	2	VGLVAVDK2	4.92865e+06	2.32283e+06	4.14124e+06
P01026	P01026	CO3_RAT	C3	Complement C3	1	VGLVAVDKGVFVLNK	VGLVAVDKGVFVLNK	3	VGLVAVDKGVFVLNK3	30278.1	27214.4	22038.2
P01026	P01026	CO3_RAT	C3	Complement C3	1	VGLVAVDKGVFVLNKK	VGLVAVDKGVFVLNKK	4	VGLVAVDKGVFVLNKK4	6056.23	8668.89	6058.75
P23965	P23965	ECI1_RAT	Eci1	Enoyl-CoA delta isomerase 1, mitochondrial	1	VGLVDEVVPEDQVHSK	VGLVDEVVPEDQVHSK	2	VGLVDEVVPEDQVHSK2	23600.7	13419.2	16991.6
P23965	P23965	ECI1_RAT	Eci1	Enoyl-CoA delta isomerase 1, mitochondrial	1	VGLVDEVVPEDQVHSK	VGLVDEVVPEDQVHSK	3	VGLVDEVVPEDQVHSK3	297665	293012	282036
Q9R0E0	Q9R0E0	CEGT_RAT	Ugcg	Ceramide glucosyltransferase	1	VGLVHGLPYVADR	VGLVHGLPYVADR	3	VGLVHGLPYVADR3	6819.56	7676.48	12415.2
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	VGLWNVPYISQAYVIR	VGLWNVPYISQAYVIR	2	VGLWNVPYISQAYVIR2	23200.8	14666.1	34644.7
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	VGLWNVPYISQAYVIR	VGLWNVPYISQAYVIR	3	VGLWNVPYISQAYVIR3	6006.38	3622.1	8473.05
Q767I8	Q767I8	PCDA4_RAT	Pcdha4	Protocadherin alpha-4	1	VGLYTGEISTTR	VGLYTGEISTTR	2	VGLYTGEISTTR2	5124.11	4770.58	5284.63
Q5U2M6	Q5U2M6	DCAF8_RAT	Dcaf8	DDB1- and CUL4-associated factor 8	1	VGLYTIYVNPANTHQFAVGGR	VGLYTIYVNPANTHQFAVGGR	3	VGLYTIYVNPANTHQFAVGGR3	23050.8	13249.5	15656.5
M0RAK0	M0RAK0	M0RAK0_RAT	Proser2	Proline and serine rich 2	1	VGMAGEPGALR	VGMAGEPGALR	2	VGMAGEPGALR2	113781	108981	113271
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	VGMEQLVHNATFR	VGMEQLVHNATFR	2	VGMEQLVHNATFR2	6899.11	1414.78	10279.3
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	VGMEQLVHNATFR	VGMEQLVHNATFR	3	VGMEQLVHNATFR3	36048.6	28917.9	103881
Q5XI83	Q5XI83	VP35L_RAT	Vps35l	VPS35 endosomal protein-sorting factor-like	1	VGMEVAPHLK	VGMEVAPHLK	2	VGMEVAPHLK2	2971.37		
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	VGMFEAQIQAQTSAIQAPR	VGMFEAQIQAQTSAIQAPR	3	VGMFEAQIQAQTSAIQAPR3	13131.2	5660.83	4344.33
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	VGMGSGSICITQEVLACGRPQATAVYK	VGMGSGSIC(UniMod:4)ITQEVLAC(UniMod:4)GRPQATAVYK	3	VGMGSGSIC(UniMod:4)ITQEVLAC(UniMod:4)GRPQATAVYK3	24156.8	12185.1	15088.5
Q5U2U2	Q5U2U2	CRKL_RAT	Crkl	Crk-like protein	1	VGMIPVPYVEK	VGMIPVPYVEK	2	VGMIPVPYVEK2	97465	78126.2	81044.1
A0A8I6B124	A0A8I6B124	A0A8I6B124_RAT	Zswim8	Zinc finger, SWIM-type containing 8	1	VGMLALEMLGR	VGMLALEMLGR	2	VGMLALEMLGR2	8520.83	10775.8	9595.59
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	VGMLNGGR	VGMLNGGR	2	VGMLNGGR2	19839.2	23138	15714.2
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	VGMQIPR	VGMQIPR	2	VGMQIPR2	76947.3	74742.7	65820.3
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	VGNAQPSLPDCLNAGDLAQR	VGNAQPSLPDC(UniMod:4)LNAGDLAQR	3	VGNAQPSLPDC(UniMod:4)LNAGDLAQR3	101005	102747	105507
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	VGNCYLK	VGNC(UniMod:4)YLK	2	VGNC(UniMod:4)YLK2	22819.9	25715.4	13158.7
A0A0G2JST1	A0A0G2JST1	A0A0G2JST1_RAT	Adgrg6	Adhesion G protein-coupled receptor G6	1	VGNEDDDWTAFSYSDK	VGNEDDDWTAFSYSDK	2	VGNEDDDWTAFSYSDK2		2892.23	3041.84
Q29RW1	F7F0L5;P02563;P02564;P12847;A0A8I6AIQ9;Q29RW1	MYH4_RAT	Myh4	Myosin-4	0	VGNEYVTK	VGNEYVTK	2	VGNEYVTK2	7745.78	10229.9	9604.71
D4A929	D4A929	WDR81_RAT	Wdr81	WD repeat-containing protein 81	1	VGNFLAR	VGNFLAR	2	VGNFLAR2	10480.3	8082.52	9346.97
F1M784	F1M784	F1M784_RAT	Pik3ap1	Phosphoinositide-3-kinase adaptor protein 1	1	VGNFYVSSESIR	VGNFYVSSESIR	2	VGNFYVSSESIR2	32671.3	24712.5	38067.9
Q5M7U6	A0A8I6GGR3;Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	0	VGNIEIK	VGNIEIK	1	VGNIEIK1	3769.75	10047.6	
Q5M7U6	A0A8I6GGR3;Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	0	VGNIEIK	VGNIEIK	2	VGNIEIK2	795558	733690	819463
Q6MGB5	Q6MGB5	DHB8_RAT	Hsd17b8	(3R)-3-hydroxyacyl-CoA dehydrogenase	1	VGNIGQTNYASSK	VGNIGQTNYASSK	2	VGNIGQTNYASSK2	11426.6	8588.93	7560.54
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	VGNLGLATSFFNER	VGNLGLATSFFNER	2	VGNLGLATSFFNER2	85560	88056.9	105025
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	VGNLGLATSFFNER	VGNLGLATSFFNER	3	VGNLGLATSFFNER3	2287.3	3228.43	1274.69
P13221	P13221	AATC_RAT	Got1	Aspartate aminotransferase, cytoplasmic	1	VGNLTVVGK	VGNLTVVGK	2	VGNLTVVGK2	28455.2	31527.8	28707.7
Q64057	Q64057	AL7A1_RAT	Aldh7a1	Alpha-aminoadipic semialdehyde dehydrogenase	1	VGNPWDPNILYGPLHTK	VGNPWDPNILYGPLHTK	3	VGNPWDPNILYGPLHTK3	7681.61	8305.64	4349.52
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	VGNQIFQSK	VGNQIFQSK	2	VGNQIFQSK2	45977.8	54748.3	51755.7
Q8JZQ0	Q8JZQ0	CSF1_RAT	Csf1	Macrophage colony-stimulating factor 1	1	VGNSATPYAK	VGNSATPYAK	2	VGNSATPYAK2	12505.2	7554.01	16372.5
P23785	P23785	GRN_RAT	Grn	Progranulin	1	VGNVECGAGHFCHDNQSCCK	VGNVEC(UniMod:4)GAGHFC(UniMod:4)HDNQSC(UniMod:4)C(UniMod:4)K	4	VGNVEC(UniMod:4)GAGHFC(UniMod:4)HDNQSC(UniMod:4)C(UniMod:4)K4	1581.85	5523.23	
Q8R508	Q8R508	FAT3_RAT	Fat3	Protocadherin Fat 3	1	VGNVNDNSPLFEK	VGNVNDNSPLFEK	2	VGNVNDNSPLFEK2	3074.2	4392.54	5396.79
B0BNN3	B0BNN3	CAH1_RAT	Ca1	Carbonic anhydrase 1	1	VGPANPNLQK	VGPANPNLQK	2	VGPANPNLQK2	26156.7	68005.3	34125.1
D3ZF26	D3ZF26	D3ZF26_RAT	Tnks1bp1	Tankyrase 1 binding protein 1	1	VGPDLELDPK	VGPDLELDPK	2	VGPDLELDPK2	9620.66	10929.9	7153.56
A0A0G2K975	A0A0G2K975	A0A0G2K975_RAT	Cfhr4	Similar to complement factor H-related protein	1	VGPDSVQCYDFGWSPSFPTCK	VGPDSVQC(UniMod:4)YDFGWSPSFPTC(UniMod:4)K	3	VGPDSVQC(UniMod:4)YDFGWSPSFPTC(UniMod:4)K3	5325.02	4175.37	11966.2
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	VGPDTER	VGPDTER	2	VGPDTER2	89204.9		105950
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	VGPESDK	VGPESDK	1	VGPESDK1			50070.8
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	VGPESDKYR	VGPESDKYR	2	VGPESDKYR2	1.77738e+07	1.49496e+07	1.47506e+07
Q6P7D4	Q6P7D4	CP20A_RAT	Cyp20a1	Cytochrome P450 20A1	1	VGPFIIPK	VGPFIIPK	2	VGPFIIPK2	49490.5	50164.1	55103.6
P70645	P70645	BLMH_RAT	Blmh	Bleomycin hydrolase	1	VGPITPLQFYK	VGPITPLQFYK	2	VGPITPLQFYK2	136473	133113	139653
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	VGPLVAGR	VGPLVAGR	2	VGPLVAGR2	7.22379e+06	7.60487e+06	8.2042e+06
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	VGPNAEPR	VGPNAEPR	2	VGPNAEPR2	118127	158830	
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	VGPPESEPAR	VGPPESEPAR	2	VGPPESEPAR2	64643.2	63012.7	65685.7
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	VGPSDDTPR	VGPSDDTPR	2	VGPSDDTPR2	28322.4	23573	26634
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	VGPVSVVAK	VGPVSVVAK	2	VGPVSVVAK2	38377.3	40338.6	28231.3
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	VGPYGSGDSAPLNEAMAVLQHHDAVTGTAR	VGPYGSGDSAPLNEAMAVLQHHDAVTGTAR	4	VGPYGSGDSAPLNEAMAVLQHHDAVTGTAR4	16490.7	19256.9	11267.2
Q66HF2	Q66HF2	TM9S1_RAT	Tm9sf1	Transmembrane 9 superfamily member 1	1	VGPYHNPQETYHYYQLPVCCPEK	VGPYHNPQETYHYYQLPVC(UniMod:4)C(UniMod:4)PEK	4	VGPYHNPQETYHYYQLPVC(UniMod:4)C(UniMod:4)PEK4	42991.3	41211.8	30673.5
Q9Z2F5	Q9Z2F5	CTBP1_RAT	Ctbp1	C-terminal-binding protein 1	1	VGQAVALR	VGQAVALR	2	VGQAVALR2	31784.1	21926	31470.5
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	VGQAVDVVGQAGK	VGQAVDVVGQAGK	2	VGQAVDVVGQAGK2	4300.87	6497.82	3819.68
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	VGQAVDVVGQAGKPK	VGQAVDVVGQAGKPK	2	VGQAVDVVGQAGKPK2	12023.5	9859.91	7463.46
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	VGQAVDVVGQAGKPK	VGQAVDVVGQAGKPK	3	VGQAVDVVGQAGKPK3	186995	205255	169291
P28042	P28042	SSBP_RAT	Ssbp1	Single-stranded DNA-binding protein, mitochondrial	1	VGQDPVMR	VGQDPVMR	2	VGQDPVMR2	36090.8	36402	41606.7
P81795	C9WPN6;P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	0	VGQEIEVR	VGQEIEVR	2	VGQEIEVR2	19579.4	15324.6	16682.2
P81795	C9WPN6;P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	0	VGQEIEVRPGIVSK	VGQEIEVRPGIVSK	2	VGQEIEVRPGIVSK2	4422.31	1130.73	3336.89
P81795	C9WPN6;P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	0	VGQEIEVRPGIVSK	VGQEIEVRPGIVSK	3	VGQEIEVRPGIVSK3	256345	262519	325354
A0A8I6AEI1	A0A8I6AEI1	A0A8I6AEI1_RAT	Hps1	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1	1	VGQEIQNAWLEFK	VGQEIQNAWLEFK	2	VGQEIQNAWLEFK2	33266	51849.3	38173.1
F1M5Q4	F1M5Q4	F1M5Q4_RAT	Fbn2	Fibrillin 2	1	VGQGHCVSGMGFNK	VGQGHC(UniMod:4)VSGMGFNK	3	VGQGHC(UniMod:4)VSGMGFNK3	7582.14	5162.9	
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	VGQGIHHAFGQGGR	VGQGIHHAFGQGGR	3	VGQGIHHAFGQGGR3	41978.1	34627.4	35435.4
D3ZES2	D3ZES2	D3ZES2_RAT	Trappc6b	Trafficking protein particle complex subunit 6B	1	VGQGLIER	VGQGLIER	2	VGQGLIER2	38056.9	32597	41276
Q4QQV2	Q4QQV2	DOK1_RAT	Dok1	Docking protein 1	1	VGQGQDITR	VGQGQDITR	2	VGQGQDITR2		94157.8	110850
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	VGQGVNHAAGQAGK	VGQGVNHAAGQAGK	2	VGQGVNHAAGQAGK2			14569.8
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	VGQGVNHAAGQAGK	VGQGVNHAAGQAGK	3	VGQGVNHAAGQAGK3			102443
A0A8I5ZYZ8	A0A8I5ZYZ8	A0A8I5ZYZ8_RAT	Ube2m	Ubiquitin-conjugating enzyme E2M	1	VGQGYPHDPPK	VGQGYPHDPPK	3	VGQGYPHDPPK3	26841.7	33805	28790.2
F1LN92	F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	1	VGQISFDLPR	VGQISFDLPR	2	VGQISFDLPR2	24857.2	15537.7	27432.9
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	VGQITVSEK	VGQITVSEK	2	VGQITVSEK2	84174.5	97342.2	83431.4
D3Z9H2	D3Z9H2	D3Z9H2_RAT	Hapln4	Hyaluronan and proteoglycan link protein 4	1	VGQLFAAWK	VGQLFAAWK	2	VGQLFAAWK2	26547.3	25768.2	20024.1
Q06647	Q06647	ATPO_RAT	Atp5po	ATP synthase subunit O, mitochondrial	1	VGQLLKDPK	VGQLLKDPK	2	VGQLLKDPK2	155083	117673	120611
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	VGQMQILR	VGQMQILR	2	VGQMQILR2	40388.7	37873.4	29087.8
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	VGQPCISDDEEIK	VGQPC(UniMod:4)ISDDEEIK	2	VGQPC(UniMod:4)ISDDEEIK2	5034.34	8060.34	5477.32
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	VGQPGDAGAAGPVAPLCPGR	VGQPGDAGAAGPVAPLC(UniMod:4)PGR	2	VGQPGDAGAAGPVAPLC(UniMod:4)PGR2	77897.8	72398.7	89250.6
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	VGQPGDAGAAGPVAPLCPGR	VGQPGDAGAAGPVAPLC(UniMod:4)PGR	3	VGQPGDAGAAGPVAPLC(UniMod:4)PGR3	8.17575e+06	8.515e+06	9.17547e+06
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	VGQPGDAGAAGPVAPLCPGRVR	VGQPGDAGAAGPVAPLC(UniMod:4)PGRVR	3	VGQPGDAGAAGPVAPLC(UniMod:4)PGRVR3	61318	146291	111889
D4A3X7	D4A3X7	D4A3X7_RAT	Snx33	Sorting nexin	1	VGQQLEK	VGQQLEK	2	VGQQLEK2	22857.9	19926.8	
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	VGQSEIR	VGQSEIR	2	VGQSEIR2		31427.8	94541.1
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	VGQSIMHGK	VGQSIMHGK	2	VGQSIMHGK2	8251.24	6783.95	
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	VGQTAFDVADEDILGYLEELQK	VGQTAFDVADEDILGYLEELQK	3	VGQTAFDVADEDILGYLEELQK3	14789.9		
P23680	P23680	SAMP_RAT	Apcs	Serum amyloid P-component	1	VGQYSLYIGNSK	VGQYSLYIGNSK	2	VGQYSLYIGNSK2	40968.6	23439.1	24341
F1M9Z5	F1M9Z5	F1M9Z5_RAT	Cd300le	Cd300 molecule-like family member E	1	VGRDPMFEVR	VGRDPMFEVR	2	VGRDPMFEVR2	23475	6867.86	10569
F1M9Z5	F1M9Z5	F1M9Z5_RAT	Cd300le	Cd300 molecule-like family member E	1	VGRDPMFEVR	VGRDPMFEVR	3	VGRDPMFEVR3	579557	559871	496470
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VGSAADIPINISETDLSLLTATVVPPSGR	VGSAADIPINISETDLSLLTATVVPPSGR	3	VGSAADIPINISETDLSLLTATVVPPSGR3	70844.4	1.6269e+06	47001.9
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VGSAADIPINISETDLSLLTATVVPPSGR	VGSAADIPINISETDLSLLTATVVPPSGR	4	VGSAADIPINISETDLSLLTATVVPPSGR4	44116.1	46503.1	70391.4
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	VGSAMVNAK	VGSAMVNAK	1	VGSAMVNAK1	4348.55	4587.88	3401.66
O08619	O08619	F13A_RAT	F13a1	Coagulation factor XIII A chain	1	VGSAMVNAK	VGSAMVNAK	2	VGSAMVNAK2	739792	755785	775684
P97849	P97849	S27A1_RAT	Slc27a1	Long-chain fatty acid transport protein 1	1	VGSCGFNSR	VGSC(UniMod:4)GFNSR	2	VGSC(UniMod:4)GFNSR2	3707.18	5092.81	4496.18
A0A8I6AE36	A0A8I6AE36;Q9QYU1	A0A8I6AE36_RAT	ENSRNOG00000067472	Peroxisomal biogenesis factor 19	0	VGSDASSQQEFTSCLK	VGSDASSQQEFTSC(UniMod:4)LK	2	VGSDASSQQEFTSC(UniMod:4)LK2	3201.79	4774.58	3986.94
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	VGSDQDLGIELLNVLHR	VGSDQDLGIELLNVLHR	2	VGSDQDLGIELLNVLHR2	5114.67		
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	VGSDQDLGIELLNVLHR	VGSDQDLGIELLNVLHR	3	VGSDQDLGIELLNVLHR3	25790.7	17848.7	40225.6
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	VGSGSLDNLGR	VGSGSLDNLGR	2	VGSGSLDNLGR2	34669	37782.3	35225.1
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	VGSHITGGDIYGIVNENSLIK	VGSHITGGDIYGIVNENSLIK	3	VGSHITGGDIYGIVNENSLIK3	28006.8	42202.1	30291.1
B0BN83	B0BN83	B0BN83_RAT	Armc1	Armadillo repeat-containing protein 1	1	VGSHPEGGASWLSTAANFLSR	VGSHPEGGASWLSTAANFLSR	3	VGSHPEGGASWLSTAANFLSR3	23667.6	30444.9	29423.5
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	VGSLDNVGHLPAGGTVK	VGSLDNVGHLPAGGTVK	2	VGSLDNVGHLPAGGTVK2	1003.86	2079.19	
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	VGSLDNVGHLPAGGTVK	VGSLDNVGHLPAGGTVK	3	VGSLDNVGHLPAGGTVK3	40217.2	36945.6	40273.4
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	VGSLGLLAHSK	VGSLGLLAHSK	2	VGSLGLLAHSK2	1419.1		
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	VGSLYPEMSAHER	VGSLYPEMSAHER	2	VGSLYPEMSAHER2	11498.9	7515.34	19707.5
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	VGSLYPEMSAHER	VGSLYPEMSAHER	3	VGSLYPEMSAHER3	209827	190604	240367
P08650	P08650	CO5_RAT	C5	Complement C5	1	VGSSENVVIQAHGYTEAFDATISLK	VGSSENVVIQAHGYTEAFDATISLK	3	VGSSENVVIQAHGYTEAFDATISLK3	56512.7	47013.6	25451.5
P97526	P97526	NF1_RAT	Nf1	Neurofibromin	1	VGSTAVQVTSAER	VGSTAVQVTSAER	2	VGSTAVQVTSAER2	3672.19		1125.39
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	VGSTENMK	VGSTENMK	2	VGSTENMK2			24983.5
F1M7P8	F1M7P8	F1M7P8_RAT	Spryd3	SPRY domain containing 3	1	VGSTIMPMSPDGLFPAVGMHSLGEEVR	VGSTIMPMSPDGLFPAVGMHSLGEEVR	3	VGSTIMPMSPDGLFPAVGMHSLGEEVR3	10466.8	13653.7	14146.5
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	VGSTSENITQK	VGSTSENITQK	2	VGSTSENITQK2	28977.2	27549.8	29753.3
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	VGSVLQEGCEK	VGSVLQEGC(UniMod:4)EK	2	VGSVLQEGC(UniMod:4)EK2	127215	124395	129388
A0A8I5Y7Q0	A0A8I5Y7Q0	A0A8I5Y7Q0_RAT	Vps13b	Vacuolar protein sorting 13 homolog B	1	VGSVSMAPQADNPLGR	VGSVSMAPQADNPLGR	2	VGSVSMAPQADNPLGR2		3182.03	1835.92
Q63488	Q63488	S20A2_RAT	Slc20a2	Sodium-dependent phosphate transporter 2	1	VGSVVAVGWIR	VGSVVAVGWIR	2	VGSVVAVGWIR2	7527.56	8000.5	11637.5
A0A0G2JTB2	A0A0G2JTB2	A0A0G2JTB2_RAT	Gbe1	1,4-alpha-glucan branching enzyme	1	VGTAMPGK	VGTAMPGK	2	VGTAMPGK2	5134	2776.49	
Q63186	Q63186	EI2BD_RAT	Eif2b4	Translation initiation factor eIF-2B subunit delta	1	VGTAQLALVAR	VGTAQLALVAR	2	VGTAQLALVAR2	23163.1	24651.1	19854.4
P05369	P05369	FPPS_RAT	Fdps	Farnesyl pyrophosphate synthase	1	VGTDIQDNK	VGTDIQDNK	2	VGTDIQDNK2	49431.4	35899.2	31396.8
Q68FR9	Q68FR9	EF1D_RAT	Eef1d	Elongation factor 1-delta	1	VGTDLLEEEITK	VGTDLLEEEITK	2	VGTDLLEEEITK2	907129	864140	1.02167e+06
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	VGTEAAFHPIEEYMVHVEEHFQLLAR	VGTEAAFHPIEEYMVHVEEHFQLLAR	4	VGTEAAFHPIEEYMVHVEEHFQLLAR4	16592.4	15759.1	15335.8
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	VGTEGLVDSFSQGLER	VGTEGLVDSFSQGLER	2	VGTEGLVDSFSQGLER2	25871.9	19008.1	19214.1
A0A0G2JV49	A0A0G2JV49	A0A0G2JV49_RAT	Ppp6r2	Protein phosphatase 6, regulatory subunit 2	1	VGTEGLVDSFSQGLER	VGTEGLVDSFSQGLER	3	VGTEGLVDSFSQGLER3	4403.21		4166.89
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	VGTFFSEVKPAGPTVEQQGEMAR	VGTFFSEVKPAGPTVEQQGEMAR	3	VGTFFSEVKPAGPTVEQQGEMAR3	13979	12095.7	18684.6
P37136	P37136	ACES_RAT	Ache	Acetylcholinesterase	1	VGTFGFLALPGSR	VGTFGFLALPGSR	2	VGTFGFLALPGSR2	53679.3	44836.3	50045.3
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	VGTGEPCCDWVGDEGAGHFVK	VGTGEPC(UniMod:4)C(UniMod:4)DWVGDEGAGHFVK	3	VGTGEPC(UniMod:4)C(UniMod:4)DWVGDEGAGHFVK3	88570.1	68900.1	72856.3
A0A0U1RRP3	A0A0U1RRP3	A0A0U1RRP3_RAT	Upf3b	UPF3B, regulator of nonsense mediated mRNA decay	1	VGTIEDDPEYRK	VGTIEDDPEYRK	2	VGTIEDDPEYRK2	2951.26		
A0A0U1RRP3	A0A0U1RRP3	A0A0U1RRP3_RAT	Upf3b	UPF3B, regulator of nonsense mediated mRNA decay	1	VGTIEDDPEYRK	VGTIEDDPEYRK	3	VGTIEDDPEYRK3	16550.3	20487.4	10795.4
P02770	P02770	ALBU_RAT	Alb	Albumin	1	VGTKCCTLPEAQR	VGTKC(UniMod:4)C(UniMod:4)TLPEAQR	3	VGTKC(UniMod:4)C(UniMod:4)TLPEAQR3	10921.6	8897.32	
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	VGTLEQLAEAHGASK	VGTLEQLAEAHGASK	2	VGTLEQLAEAHGASK2	13785.2	8557.12	7955.53
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	VGTLEQLAEAHGASK	VGTLEQLAEAHGASK	3	VGTLEQLAEAHGASK3	92546.6	101381	81342.5
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	VGTLRPPEGPPEPMVVVPVDVEKEDVR	VGTLRPPEGPPEPMVVVPVDVEKEDVR	4	VGTLRPPEGPPEPMVVVPVDVEKEDVR4	37626.9	36001.7	43868
A0A8I6GJY7	A0A8I6GJY7	A0A8I6GJY7_RAT	Snx9	Sorting nexin 9	1	VGTMSYALQAEMNHFHSNR	VGTMSYALQAEMNHFHSNR	4	VGTMSYALQAEMNHFHSNR4	32370.4	24106.4	17206.3
Q80W57	Q80W57	ABCG2_RAT	Abcg2	Broad substrate specificity ATP-binding cassette transporter ABCG2	1	VGTQFTR	VGTQFTR	2	VGTQFTR2	13841.9	15943.9	15131
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	VGTQTFCSR	VGTQTFC(UniMod:4)SR	2	VGTQTFC(UniMod:4)SR2	272287	239372	243680
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	VGTSDMTK	VGTSDMTK	2	VGTSDMTK2	24954.4	29479.8	
F7EYK0	F7EYK0	F7EYK0_RAT	Fkbp5	peptidylprolyl isomerase	1	VGTSEETPMIGDK	VGTSEETPMIGDK	2	VGTSEETPMIGDK2	3288.15		
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	VGTTVYFSCNEGYELQGQPSSK	VGTTVYFSC(UniMod:4)NEGYELQGQPSSK	3	VGTTVYFSC(UniMod:4)NEGYELQGQPSSK3	9471	9545.21	15218.5
Q62833	Q62833	GRK5_RAT	Grk5	G protein-coupled receptor kinase 5	1	VGTVGYMAPEVLNNQR	VGTVGYMAPEVLNNQR	2	VGTVGYMAPEVLNNQR2	3446.63	6035.75	2634.75
P97711	P97711	GRK6_RAT	Grk6	G protein-coupled receptor kinase 6	1	VGTVGYMAPEVVK	VGTVGYMAPEVVK	2	VGTVGYMAPEVVK2	75644.8	69264.4	67430.7
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	VGVDEVSPEK	VGVDEVSPEK	2	VGVDEVSPEK2	1.2071e+06	719038	766043
D4A7H1	D4A7H1	SL9A9_RAT	Slc9a9	Sodium/hydrogen exchanger 9	1	VGVDLDESLKEEPSSQQEANK	VGVDLDESLKEEPSSQQEANK	3	VGVDLDESLKEEPSSQQEANK3	7087.4	5402.07	4202.75
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	VGVDPLIIPTDYWK	VGVDPLIIPTDYWK	2	VGVDPLIIPTDYWK2	67492.7	63143.8	73130.3
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	VGVDPLIIPTDYWK	VGVDPLIIPTDYWK	3	VGVDPLIIPTDYWK3	9125.48		12073.3
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	VGVEINR	VGVEINR	2	VGVEINR2	140348	142910	128888
Q9Z244	Q9Z244	GMPR1_RAT	Gmpr	GMP reductase 1	1	VGVGPGSVCTTR	VGVGPGSVC(UniMod:4)TTR	2	VGVGPGSVC(UniMod:4)TTR2	206754	189271	194316
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	VGVGTSFGLPQTR	VGVGTSFGLPQTR	2	VGVGTSFGLPQTR2	58860.6	52206.3	50905.4
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	VGVHTGTVLCGILGMR	VGVHTGTVLC(UniMod:4)GILGMR	3	VGVHTGTVLC(UniMod:4)GILGMR3	17148.1	14655.4	13134.5
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	VGVISLGVR	VGVISLGVR	2	VGVISLGVR2	7023.98	8616.73	1897.27
Q920J4	Q920J4	TXNL1_RAT	Txnl1	Thioredoxin-like protein 1	1	VGVKPVGSDPDFQPELSGAGSR	VGVKPVGSDPDFQPELSGAGSR	3	VGVKPVGSDPDFQPELSGAGSR3	612202	557113	621064
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	VGVLAASMEAK	VGVLAASMEAK	2	VGVLAASMEAK2	46317.5	40188.9	30608.3
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	VGVLLDILQR	VGVLLDILQR	2	VGVLLDILQR2	21675.4	15610.2	19948.2
Q03555	Q03555	GEPH_RAT	Gphn	Gephyrin	1	VGVLTVSDSCFR	VGVLTVSDSC(UniMod:4)FR	2	VGVLTVSDSC(UniMod:4)FR2	6807.72	6028.78	4593.81
G3V8S6	G3V8S6	G3V8S6_RAT	Hrc	Histidine rich calcium binding protein	1	VGVMENSDDK	VGVMENSDDK	2	VGVMENSDDK2	7181.64	11250.7	8405.38
M0R5F1	M0R5F1	M0R5F1_RAT	Aspn	Asporin	1	VGVNDFCPTVPK	VGVNDFC(UniMod:4)PTVPK	2	VGVNDFC(UniMod:4)PTVPK2	77229.6	91961.3	81816.6
P04797	F1LUV3;M0R660;E9PTN6;A0A0G2JWC0;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	VGVNGFGR	VGVNGFGR	2	VGVNGFGR2	2.12942e+06	2.19571e+06	2.31378e+06
Q6P686	Q6P686	OSTF1_RAT	Ostf1	Osteoclast-stimulating factor 1	1	VGVNGLDK	VGVNGLDK	2	VGVNGLDK2	247238	270484	246688
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	VGVPEGSPVSR	VGVPEGSPVSR	2	VGVPEGSPVSR2	396170	376138	323129
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	VGVPTETGALTLNR	VGVPTETGALTLNR	2	VGVPTETGALTLNR2	56157.2	47777.8	49299.2
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	VGVPTETGALTLNR	VGVPTETGALTLNR	3	VGVPTETGALTLNR3	9447.91	4594.38	7373.44
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	VGVQDFVLLENFTSEAAFIENLR	VGVQDFVLLENFTSEAAFIENLR	3	VGVQDFVLLENFTSEAAFIENLR3		10988.5	6740.82
B2GV54	B2GV54	NCEH1_RAT	Nceh1	Neutral cholesterol ester hydrolase 1	1	VGVSGDSAGGNLAAALGQQFTYVESLK	VGVSGDSAGGNLAAALGQQFTYVESLK	3	VGVSGDSAGGNLAAALGQQFTYVESLK3	21655	23432.4	33771.2
D3ZR49	D3ZR49	D3ZR49_RAT	Man1a2	alpha-1,2-Mannosidase	1	VGVSGGDPEDAEIR	VGVSGGDPEDAEIR	2	VGVSGGDPEDAEIR2	11354.2	5467.18	9125.65
D3ZR49	D3ZR49	D3ZR49_RAT	Man1a2	alpha-1,2-Mannosidase	1	VGVSGGDPEDAEIRK	VGVSGGDPEDAEIRK	3	VGVSGGDPEDAEIRK3	2119.12	5652.85	
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	VGVTVAQTTMEPHLLEACVR	VGVTVAQTTMEPHLLEAC(UniMod:4)VR	3	VGVTVAQTTMEPHLLEAC(UniMod:4)VR3	14020.8	13134.5	17230.2
A0A8I6AHL9	A0A8I6AHL9	A0A8I6AHL9_RAT	Col6a3	Collagen type VI alpha 3 chain	1	VGVVQYSDEPR	VGVVQYSDEPR	2	VGVVQYSDEPR2	16773.1	16988.1	10201.5
F1LNH3	F1LNH3	F1LNH3_RAT	Col6a2	Collagen type VI alpha 2 chain	1	VGVVQYSHEGTFEAIR	VGVVQYSHEGTFEAIR	3	VGVVQYSHEGTFEAIR3	13245.2	7893.44	9169.08
I6L9G5	I6L9G5	RCN3_RAT	Rcn3	Reticulocalbin-3	1	VGWEELR	VGWEELR	2	VGWEELR2	250022	248829	269234
A0A8I5ZN92	A0A8I5ZN92	A0A8I5ZN92_RAT	Actn2	Actinin alpha 2	1	VGWELLLTTIAR	VGWELLLTTIAR	2	VGWELLLTTIAR2	7641.72	4062.47	6878.67
Q9Z1P2	Q9QXQ0;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	VGWEQLLTTIAR	VGWEQLLTTIAR	2	VGWEQLLTTIAR2	3.65598e+06	3.65831e+06	4.16231e+06
Q9Z1P2	Q9QXQ0;Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	0	VGWEQLLTTIAR	VGWEQLLTTIAR	3	VGWEQLLTTIAR3	420880	493938	565110
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	VGWFPSTYVEEDE	VGWFPSTYVEEDE	2	VGWFPSTYVEEDE2	9381.7	14893.8	13237
Q9ES54	Q9ES54	NPL4_RAT	Nploc4	Nuclear protein localization protein 4 homolog	1	VGWIFTDLVSEDTR	VGWIFTDLVSEDTR	2	VGWIFTDLVSEDTR2	15077.3	18340.2	12963.4
Q9ES54	Q9ES54	NPL4_RAT	Nploc4	Nuclear protein localization protein 4 homolog	1	VGWIFTDLVSEDTRK	VGWIFTDLVSEDTRK	3	VGWIFTDLVSEDTRK3	19652.4	11835.1	5630.91
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	VGWSTMQASLDLGTDK	VGWSTMQASLDLGTDK	2	VGWSTMQASLDLGTDK2	8460.11		5866.05
P17945	P17945	HGF_RAT	Hgf	Hepatocyte growth factor	1	VGYCSQIPK	VGYC(UniMod:4)SQIPK	2	VGYC(UniMod:4)SQIPK2	3762.85	6772.04	
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	VGYILHQNK	VGYILHQNK	2	VGYILHQNK2	523985	454412	453426
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	VGYLAASQCFHEGTDVIMLTTNQIR	VGYLAASQC(UniMod:4)FHEGTDVIMLTTNQIR	3	VGYLAASQC(UniMod:4)FHEGTDVIMLTTNQIR3	19712.2	32031.6	23445.5
P18614	P18614	ITA1_RAT	Itga1	Integrin alpha-1	1	VGYPFLR	VGYPFLR	2	VGYPFLR2	14369.6	7119.46	9806.43
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	VGYTPDWIFLLR	VGYTPDWIFLLR	2	VGYTPDWIFLLR2	74561.9	41272.4	73100.1
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	VGYTPDWIFLLR	VGYTPDWIFLLR	3	VGYTPDWIFLLR3	7468.48	11767.4	9804.58
B2GUZ6	B2GUZ6	B2GUZ6_RAT	Rtn4ip1	Reticulon 4 interacting protein 1	1	VHAASVNPIDVNMR	VHAASVNPIDVNMR	3	VHAASVNPIDVNMR3	15286.8	7728.49	17890.4
Q6AYT0	Q6AYT0	QOR_RAT	Cryz	Quinone oxidoreductase	1	VHACGVNPVETYIR	VHAC(UniMod:4)GVNPVETYIR	3	VHAC(UniMod:4)GVNPVETYIR3	5583.55	2509.37	6648.53
F7ELS2	F7ELS2;A0A8I6GM53	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	0	VHAELADVLTEAVVDSILAIR	VHAELADVLTEAVVDSILAIR	3	VHAELADVLTEAVVDSILAIR3	141472		
F7ELS2	F7ELS2;A0A8I6GM53	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	0	VHAELADVLTEAVVDSILAIR	VHAELADVLTEAVVDSILAIR	4	VHAELADVLTEAVVDSILAIR4		14455.8	12244.8
P54313	P54311;P54313;P52287	GBB2_RAT	Gnb2	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2	0	VHAIPLR	VHAIPLR	2	VHAIPLR2	406166	562249	533056
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	VHAPPINMESVHMK	VHAPPINMESVHMK	3	VHAPPINMESVHMK3	40674.3	35037.4	31767.4
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	VHAPPINMESVHMK	VHAPPINMESVHMK	4	VHAPPINMESVHMK4	47071.9	44908.7	49242.9
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	VHAPWEVLCTYAEIMHIK	VHAPWEVLC(UniMod:4)TYAEIMHIK	3	VHAPWEVLC(UniMod:4)TYAEIMHIK3	140785	127821	91389.3
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	VHAPWEVLCTYAEIMHIK	VHAPWEVLC(UniMod:4)TYAEIMHIK	4	VHAPWEVLC(UniMod:4)TYAEIMHIK4	22711.2	21148.6	33202.5
A0A0G2JVP5	A0A0G2JVP5	A0A0G2JVP5_RAT	Paip1	Poly(A) binding protein interacting protein 1	1	VHATSTYR	VHATSTYR	2	VHATSTYR2			7419.85
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	VHAVIGVLMDDTDPLVTVMK	VHAVIGVLMDDTDPLVTVMK	3	VHAVIGVLMDDTDPLVTVMK3	36125.9	35255.3	45413.9
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	VHAVNLQQAGLADGR	VHAVNLQQAGLADGR	2	VHAVNLQQAGLADGR2	3953.23	5902.78	4741
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	VHAVNLQQAGLADGR	VHAVNLQQAGLADGR	3	VHAVNLQQAGLADGR3	51146.2	62649.6	64107.9
Q8R491	Q8R491;Q641Z6	EHD3_RAT	Ehd3	EH domain-containing protein 3	0	VHAYIISSLK	VHAYIISSLK	2	VHAYIISSLK2	104443	110628	112068
Q8R491	Q8R491;Q641Z6	EHD3_RAT	Ehd3	EH domain-containing protein 3	0	VHAYIISSLKK	VHAYIISSLKK	3	VHAYIISSLKK3	84050.8	101601	93008.8
Q4V8H8	Q8R3Z7;Q4V8H8	EHD2_RAT	Ehd2	EH domain-containing protein 2	0	VHAYIISYLK	VHAYIISYLK	2	VHAYIISYLK2	17644.8	31302.8	19400.2
Q4V8H8	Q8R3Z7;Q4V8H8	EHD2_RAT	Ehd2	EH domain-containing protein 2	0	VHAYIISYLK	VHAYIISYLK	3	VHAYIISYLK3	42483.1	56049.3	62384.1
Q91Y81	Q91Y81	SEPT2_RAT	Septin2	Septin-2	1	VHCCFYFISPFGHGLKPLDVAFMK	VHC(UniMod:4)C(UniMod:4)FYFISPFGHGLKPLDVAFMK	4	VHC(UniMod:4)C(UniMod:4)FYFISPFGHGLKPLDVAFMK4	7764.84	3731.02	5278.12
Q9JJM9	Q9JJM9	SEPT5_RAT	Septin5	Septin-5	1	VHCCLYFISPFGHGLRPVDVGFMK	VHC(UniMod:4)C(UniMod:4)LYFISPFGHGLRPVDVGFMK	4	VHC(UniMod:4)C(UniMod:4)LYFISPFGHGLRPVDVGFMK4	25363.2	20706.9	19470.5
P23785	P23785	GRN_RAT	Grn	Progranulin	1	VHCCPHGASCDLVHTR	VHC(UniMod:4)C(UniMod:4)PHGASC(UniMod:4)DLVHTR	3	VHC(UniMod:4)C(UniMod:4)PHGASC(UniMod:4)DLVHTR3		3528.33	1049.02
P23785	P23785	GRN_RAT	Grn	Progranulin	1	VHCCPHGASCDLVHTR	VHC(UniMod:4)C(UniMod:4)PHGASC(UniMod:4)DLVHTR	4	VHC(UniMod:4)C(UniMod:4)PHGASC(UniMod:4)DLVHTR4	56983.9	54582.1	21097
Q03343	Q04400;Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	0	VHCGVLGLR	VHC(UniMod:4)GVLGLR	2	VHC(UniMod:4)GVLGLR2	39701.8	26296.9	21246.6
D3ZD73	D3ZD73;A0A8I5Y7L2	D3ZD73_RAT	Ddx6	DEAD-box helicase 6	0	VHCLNTLFSR	VHC(UniMod:4)LNTLFSR	2	VHC(UniMod:4)LNTLFSR2	6288.23		4297.38
D3ZD73	D3ZD73;A0A8I5Y7L2	D3ZD73_RAT	Ddx6	DEAD-box helicase 6	0	VHCLNTLFSR	VHC(UniMod:4)LNTLFSR	3	VHC(UniMod:4)LNTLFSR3	10113.6		12018.3
A0A8I6AA52	A0A8I6AA52	A0A8I6AA52_RAT	Wdr48	WD repeat-containing protein 48	1	VHDEGVWALQVNDAFTHVYSGGR	VHDEGVWALQVNDAFTHVYSGGR	3	VHDEGVWALQVNDAFTHVYSGGR3	1079.17		
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	VHELKEHNGQVTGIDWAPESNR	VHELKEHNGQVTGIDWAPESNR	3	VHELKEHNGQVTGIDWAPESNR3		3016.31	
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	VHELKEHNGQVTGIDWAPESNR	VHELKEHNGQVTGIDWAPESNR	4	VHELKEHNGQVTGIDWAPESNR4	22288.9	30776.1	35992.8
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	VHELVVQAR	VHELVVQAR	2	VHELVVQAR2		4385.68	7054.88
Q2PQA9	Q2PQA9	KINH_RAT	Kif5b	Kinesin-1 heavy chain	1	VHEMEKEHLNK	VHEMEKEHLNK	3	VHEMEKEHLNK3			17848.9
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	VHEMMEANR	VHEMMEANR	2	VHEMMEANR2	15270.2	20693.6	19887.6
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	VHFALLGTWDEK	VHFALLGTWDEK	2	VHFALLGTWDEK2	10171.4	11496.2	4494.33
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	VHFALLGTWDEK	VHFALLGTWDEK	3	VHFALLGTWDEK3	40573.6	38232.2	40245.1
Q5U2N3	Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	1	VHFPEALGHVALR	VHFPEALGHVALR	3	VHFPEALGHVALR3	1385.06	6918.41	5038.74
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	VHFTAER	VHFTAER	2	VHFTAER2	35939.8	31880.4	33676.4
Q4V8E4	Q4V8E4	CFA36_RAT	Cfap36	Cilia- and flagella-associated protein 36	1	VHFTNQSVQPLAR	VHFTNQSVQPLAR	3	VHFTNQSVQPLAR3	12453.6	11648.9	9038.45
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	VHFTSDAGVAGK	VHFTSDAGVAGK	3	VHFTSDAGVAGK3	4995.09	5246.03	
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	VHFVPGWDCHGLPIETK	VHFVPGWDC(UniMod:4)HGLPIETK	3	VHFVPGWDC(UniMod:4)HGLPIETK3	22117.3	15430.1	17100
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	VHFVPGWDCHGLPIETK	VHFVPGWDC(UniMod:4)HGLPIETK	4	VHFVPGWDC(UniMod:4)HGLPIETK4	42093.7	36970.9	40796.8
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	VHGDDFQVNR	VHGDDFQVNR	2	VHGDDFQVNR2	28228.7	45039.3	23745.6
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	VHGDDFQVNR	VHGDDFQVNR	3	VHGDDFQVNR3	67730.2	88270.2	76661.4
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	VHGDPAVWWVSQFVK	VHGDPAVWWVSQFVK	2	VHGDPAVWWVSQFVK2	28431.3	11363.5	4983.25
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	VHGDPAVWWVSQFVK	VHGDPAVWWVSQFVK	3	VHGDPAVWWVSQFVK3	69325.1	76567.7	69491.3
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	VHGFLMNDCLLVATWLPQR	VHGFLMNDC(UniMod:4)LLVATWLPQR	3	VHGFLMNDC(UniMod:4)LLVATWLPQR3	9305.84		6066.66
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	VHGGTTPSMIYSR	VHGGTTPSMIYSR	3	VHGGTTPSMIYSR3	10600.9	9693.71	11394.2
P13107	P13107	CP2B3_RAT	Cyp2b3	Cytochrome P450 2B3	1	VHGHLPPGPRPLPLLGNLLQMDR	VHGHLPPGPRPLPLLGNLLQMDR	4	VHGHLPPGPRPLPLLGNLLQMDR4	6444.63	4215.26	6862.46
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	VHGLALQISEDSLCNK	VHGLALQISEDSLC(UniMod:4)NK	3	VHGLALQISEDSLC(UniMod:4)NK3	18807		
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VHGPGIQSGTTNKPNK	VHGPGIQSGTTNKPNK	2	VHGPGIQSGTTNKPNK2	212465		185192
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VHGPGIQSGTTNKPNK	VHGPGIQSGTTNKPNK	3	VHGPGIQSGTTNKPNK3	1.72331e+06		1.16555e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VHGPGIQSGTTNKPNK	VHGPGIQSGTTNKPNK	4	VHGPGIQSGTTNKPNK4	2.12475e+06		3.00498e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VHGPGIQSGTTNKPNKFTVETR	VHGPGIQSGTTNKPNKFTVETR	4	VHGPGIQSGTTNKPNKFTVETR4	3688.59	5194.33	8971.74
O35783	O35783	CALU_RAT	Calu	Calumenin	1	VHHEPQLSDK	VHHEPQLSDK	2	VHHEPQLSDK2	637062		437935
O35783	O35783	CALU_RAT	Calu	Calumenin	1	VHHEPQLSDK	VHHEPQLSDK	3	VHHEPQLSDK3	653741		538723
Q8VII0	Q8VII0	FRMD6_RAT	Frmd6	FERM domain-containing protein 6 (Fragment)	1	VHHGDYFEPEAYFPAWVVSK	VHHGDYFEPEAYFPAWVVSK	4	VHHGDYFEPEAYFPAWVVSK4		2859.38	3053.3
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	VHHLEPDAFGGLPR	VHHLEPDAFGGLPR	2	VHHLEPDAFGGLPR2	247032	176147	157796
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	VHHLEPDAFGGLPR	VHHLEPDAFGGLPR	3	VHHLEPDAFGGLPR3	5.74937e+06	3.82588e+06	3.56546e+06
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	VHHLEPDAFGGLPR	VHHLEPDAFGGLPR	4	VHHLEPDAFGGLPR4	3.74091e+06	2.8862e+06	2.81357e+06
Q0D2L2	Q0D2L2	Q0D2L2_RAT	Mrps22	Mitochondrial ribosomal protein S22	1	VHHQTYEDIDR	VHHQTYEDIDR	3	VHHQTYEDIDR3	6176.76	10191.6	4975.29
Q9Z1A6	Q9Z1A6	VIGLN_RAT	Hdlbp	Vigilin	1	VHIEFTEGEDK	VHIEFTEGEDK	3	VHIEFTEGEDK3	9714.29	13742.1	10776.5
Q794E4	Q794E4;Q6AY09;A0A8I5ZW75	HNRPF_RAT	Hnrnpf	Heterogeneous nuclear ribonucleoprotein F	0	VHIEIGPDGR	VHIEIGPDGR	2	VHIEIGPDGR2	22621.4	8764.12	4703.66
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VHIFFQDGMVTVIPSK	VHIFFQDGMVTVIPSK	2	VHIFFQDGMVTVIPSK2	142268	154779	118333
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VHIFFQDGMVTVIPSK	VHIFFQDGMVTVIPSK	3	VHIFFQDGMVTVIPSK3	1.4423e+06	1.46578e+06	1.39619e+06
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VHIFFQDGMVTVIPSK	VHIFFQDGMVTVIPSK	4	VHIFFQDGMVTVIPSK4		3407.15	
Q6PDV7	A0A8I6G4V0;Q6PDV7;A0A8I5ZXK4	RL10_RAT	Rpl10	Large ribosomal subunit protein uL16	0	VHIGQVIMSIR	VHIGQVIMSIR	2	VHIGQVIMSIR2	12519.3	17039.6	
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	VHIISFK	VHIISFK	2	VHIISFK2	61592.1	37723.7	37759.8
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	VHINPNSLFDVQVK	VHINPNSLFDVQVK	2	VHINPNSLFDVQVK2	2198.75	5439.16	3646.25
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	VHINPNSLFDVQVK	VHINPNSLFDVQVK	3	VHINPNSLFDVQVK3	19004.2	29870.3	16423.5
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	VHIPGAIYLSIK	VHIPGAIYLSIK	2	VHIPGAIYLSIK2	16420.4	26856.4	9889.2
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	VHIPGAIYLSIK	VHIPGAIYLSIK	3	VHIPGAIYLSIK3	49889.7	56704.7	54992.4
Q71UF4	Q71UF4	RBBP7_RAT	Rbbp7	Histone-binding protein RBBP7	1	VHIPNDDAQFDASHCDSDK	VHIPNDDAQFDASHC(UniMod:4)DSDK	3	VHIPNDDAQFDASHC(UniMod:4)DSDK3	17038.9		
Q71UF4	Q71UF4	RBBP7_RAT	Rbbp7	Histone-binding protein RBBP7	1	VHIPNDDAQFDASHCDSDK	VHIPNDDAQFDASHC(UniMod:4)DSDK	4	VHIPNDDAQFDASHC(UniMod:4)DSDK4	32143.4		2769.81
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	VHISEATAK	VHISEATAK	2	VHISEATAK2		15368	
Q6AYP5	Q6AYP5	CADM1_RAT	Cadm1	Cell adhesion molecule 1	1	VHKEDDGVPVICQVEHPAVTGNLQTQR	VHKEDDGVPVIC(UniMod:4)QVEHPAVTGNLQTQR	4	VHKEDDGVPVIC(UniMod:4)QVEHPAVTGNLQTQR4	17897.2	10874.3	19552.4
A0A0G2JTX7	A0A0G2JTX7	A0A0G2JTX7_RAT	Col6a5	Collagen type VI alpha 5 chain	1	VHKPDLDYIIK	VHKPDLDYIIK	2	VHKPDLDYIIK2	3729.29		6663.55
A0A0G2JTX7	A0A0G2JTX7	A0A0G2JTX7_RAT	Col6a5	Collagen type VI alpha 5 chain	1	VHKPDLDYIIK	VHKPDLDYIIK	3	VHKPDLDYIIK3	22321.1	27123.9	30639.3
Q5I0E7	Q5I0E7	TMED9_RAT	Tmed9	Transmembrane emp24 domain-containing protein 9	1	VHLDIQVGEHANDYAEIAAK	VHLDIQVGEHANDYAEIAAK	3	VHLDIQVGEHANDYAEIAAK3	19825.3	19277.3	6791.93
Q5I0E7	Q5I0E7	TMED9_RAT	Tmed9	Transmembrane emp24 domain-containing protein 9	1	VHLDIQVGEHANDYAEIAAK	VHLDIQVGEHANDYAEIAAK	4	VHLDIQVGEHANDYAEIAAK4	35444.7	44525.7	34368.6
G3V6N2	G3V6N2	G3V6N2_RAT	Tmed4	Transmembrane p24 trafficking protein 4	1	VHLDIQVGEHANNYPEIAAK	VHLDIQVGEHANNYPEIAAK	4	VHLDIQVGEHANNYPEIAAK4	56029.9	41001.3	51994.5
D3ZGB8	D3ZGB8	D3ZGB8_RAT	Cilp	Cartilage intermediate layer protein	1	VHLDSTQVK	VHLDSTQVK	2	VHLDSTQVK2	1688.21		
G3V6S0	Q9QWN8;G3V6S0;A0A8I6AWM3	G3V6S0_RAT	Sptbn1	Spectrin beta chain	0	VHLENMGSHDIVDGNHR	VHLENMGSHDIVDGNHR	3	VHLENMGSHDIVDGNHR3	16595.2	18221.8	3645.16
G3V6S0	Q9QWN8;G3V6S0;A0A8I6AWM3	G3V6S0_RAT	Sptbn1	Spectrin beta chain	0	VHLENMGSHDIVDGNHR	VHLENMGSHDIVDGNHR	4	VHLENMGSHDIVDGNHR4	78350.9	79669.7	68777.8
B5DF86	B5DF86	B5DF86_RAT	Cog8	Conserved oligomeric Golgi complex subunit 8	1	VHLFDIITQYR	VHLFDIITQYR	2	VHLFDIITQYR2	4483.63	5830.67	5928.86
B5DF86	B5DF86	B5DF86_RAT	Cog8	Conserved oligomeric Golgi complex subunit 8	1	VHLFDIITQYR	VHLFDIITQYR	3	VHLFDIITQYR3	15183.6	9185.88	4751.62
Q5XIC4	Q5XIC4	SPG21_RAT	Spg21	Maspardin	1	VHLFGASLGGFLAQK	VHLFGASLGGFLAQK	3	VHLFGASLGGFLAQK3	23486.4	18596.1	20831.1
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	VHLFMAGGYDDR	VHLFMAGGYDDR	2	VHLFMAGGYDDR2	15896.6	14037.3	5549.43
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	VHLFMAGGYDDR	VHLFMAGGYDDR	3	VHLFMAGGYDDR3	53832.7	54161.4	58080.8
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	VHLFQYPCAR	VHLFQYPC(UniMod:4)AR	3	VHLFQYPC(UniMod:4)AR3	30619.3	42705.6	49950.7
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	VHLFQYPCSK	VHLFQYPC(UniMod:4)SK	3	VHLFQYPC(UniMod:4)SK3	19186.5	17162.2	12317.5
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	VHLFQYPCSKPK	VHLFQYPC(UniMod:4)SKPK	3	VHLFQYPC(UniMod:4)SKPK3	37288.6	27967.3	26683.2
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	VHLFSYPCCQPR	VHLFSYPC(UniMod:4)C(UniMod:4)QPR	2	VHLFSYPC(UniMod:4)C(UniMod:4)QPR2	7620.31	6029.57	7946.89
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	VHLFSYPCCQPR	VHLFSYPC(UniMod:4)C(UniMod:4)QPR	3	VHLFSYPC(UniMod:4)C(UniMod:4)QPR3	108355	133896	124217
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	VHLFSYPCSQFR	VHLFSYPC(UniMod:4)SQFR	2	VHLFSYPC(UniMod:4)SQFR2	42187.1	40125.2	43836.4
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	VHLFSYPCSQFR	VHLFSYPC(UniMod:4)SQFR	3	VHLFSYPC(UniMod:4)SQFR3	91262.1	83988.3	91559.1
Q9JJM7	Q9JJM7	GP1BB_RAT	Gp1bb	Platelet glycoprotein Ib beta chain	1	VHLGANPWR	VHLGANPWR	2	VHLGANPWR2	3.02469e+06	3.22105e+06	3.24543e+06
D3ZJF9	D3ZJF9	D3ZJF9_RAT	Gla	Alpha-galactosidase	1	VHLGFYEWPLTLK	VHLGFYEWPLTLK	2	VHLGFYEWPLTLK2	11515.9	8866.22	4608.19
D3ZJF9	D3ZJF9	D3ZJF9_RAT	Gla	Alpha-galactosidase	1	VHLGFYEWPLTLK	VHLGFYEWPLTLK	3	VHLGFYEWPLTLK3	76765.5	57574	55035.7
Q6AZ83	Q6AZ83	G6PC3_RAT	G6pc3	Glucose-6-phosphatase 3	1	VHLGNGQK	VHLGNGQK	2	VHLGNGQK2			2278.51
A0A8I5ZQF6	A0A8I5ZQF6	A0A8I5ZQF6_RAT	RGD1563861	Similar to ribosomal protein L10	1	VHLGQVIMSIR	VHLGQVIMSIR	2	VHLGQVIMSIR2	12928.4		10585.2
A0A8I5ZQF6	A0A8I5ZQF6	A0A8I5ZQF6_RAT	RGD1563861	Similar to ribosomal protein L10	1	VHLGQVIMSIR	VHLGQVIMSIR	3	VHLGQVIMSIR3	36425.9	30798.3	24495.1
P07867	P07867	LIPC_RAT	Lipc	Hepatic triacylglycerol lipase	1	VHLIGYSLGAHVSGFAGSSMGGK	VHLIGYSLGAHVSGFAGSSMGGK	3	VHLIGYSLGAHVSGFAGSSMGGK3	20849.5	13818.2	16645.3
P07867	P07867	LIPC_RAT	Lipc	Hepatic triacylglycerol lipase	1	VHLIGYSLGAHVSGFAGSSMGGK	VHLIGYSLGAHVSGFAGSSMGGK	4	VHLIGYSLGAHVSGFAGSSMGGK4	31583.8	24644.1	12649.2
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	VHLLNAHGLDEAGIDGGGIFR	VHLLNAHGLDEAGIDGGGIFR	3	VHLLNAHGLDEAGIDGGGIFR3	17829	18377	15052
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	VHLLNAHGLDEAGIDGGGIFR	VHLLNAHGLDEAGIDGGGIFR	4	VHLLNAHGLDEAGIDGGGIFR4	42915.3	38906.1	43253.5
P47861	P47861	SYT5_RAT	Syt5	Synaptotagmin-5	1	VHLLQGGK	VHLLQGGK	2	VHLLQGGK2	30505.5	20963.1	19356.4
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	VHLLSADHEEEGEHTWR	VHLLSADHEEEGEHTWR	4	VHLLSADHEEEGEHTWR4	6239.93		5772.88
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	VHLMNPMVPGLTGSK	VHLMNPMVPGLTGSK	3	VHLMNPMVPGLTGSK3	19630.6	17484	18699.3
D3ZWZ9	D3ZWZ9	GP107_RAT	Gpr107	Protein GPR107	1	VHLNTFGFFK	VHLNTFGFFK	2	VHLNTFGFFK2	8726.23	5758.52	
D3ZWZ9	D3ZWZ9	GP107_RAT	Gpr107	Protein GPR107	1	VHLNTFGFFK	VHLNTFGFFK	3	VHLNTFGFFK3	15978.1	8553.76	15879.3
Q99P74	Q99P74	RB27B_RAT	Rab27b	Ras-related protein Rab-27B	1	VHLQLWDTAGQER	VHLQLWDTAGQER	2	VHLQLWDTAGQER2	468892	365345	286159
Q99P74	Q99P74	RB27B_RAT	Rab27b	Ras-related protein Rab-27B	1	VHLQLWDTAGQER	VHLQLWDTAGQER	3	VHLQLWDTAGQER3	958832	986442	1.36597e+06
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	VHLQQSGSFQYYFLQGQEK	VHLQQSGSFQYYFLQGQEK	3	VHLQQSGSFQYYFLQGQEK3	11388.4		8824.85
O89035	O89035	DIC_RAT	Slc25a10	Mitochondrial dicarboxylate carrier	1	VHLQTQQEVK	VHLQTQQEVK	2	VHLQTQQEVK2	8470.74	4246.88	4260.49
O89035	O89035	DIC_RAT	Slc25a10	Mitochondrial dicarboxylate carrier	1	VHLQTQQEVK	VHLQTQQEVK	3	VHLQTQQEVK3	7200.68	3687.44	7640.31
P14046	Q6IE52;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	VHLSFSPSQSLPASQTHMR	VHLSFSPSQSLPASQTHMR	3	VHLSFSPSQSLPASQTHMR3	494017	384441	339855
P14046	Q6IE52;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	VHLSFSPSQSLPASQTHMR	VHLSFSPSQSLPASQTHMR	4	VHLSFSPSQSLPASQTHMR4	127181	102929	92812
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	VHLSNVGPEMAGVTVSGLTPAR	VHLSNVGPEMAGVTVSGLTPAR	3	VHLSNVGPEMAGVTVSGLTPAR3	9612.74	7052.37	5174.41
P02091	P11517;P02091	HBB1_RAT	Hbb	Hemoglobin subunit beta-1	0	VHLTDAEK	VHLTDAEK	1	VHLTDAEK1	7326.4	5220.27	10229.3
P02091	P11517;P02091	HBB1_RAT	Hbb	Hemoglobin subunit beta-1	0	VHLTDAEK	VHLTDAEK	2	VHLTDAEK2	1.17834e+06	1.216e+06	1.08205e+06
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	VHLTGIDINPNALFPPVEFPVPR	VHLTGIDINPNALFPPVEFPVPR	3	VHLTGIDINPNALFPPVEFPVPR3	29160.7	40254	47759.4
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	VHLTILTLPVLTTLPGDR	VHLTILTLPVLTTLPGDR	3	VHLTILTLPVLTTLPGDR3	3685.44	1846.75	1492.45
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	VHLTPVEGVPDSDYINASFINGYQEK	VHLTPVEGVPDSDYINASFINGYQEK	3	VHLTPVEGVPDSDYINASFINGYQEK3	5000.23	4444.19	4683.64
B5DEY9	B5DEY9	B5DEY9_RAT	Csgalnact1	Hexosyltransferase	1	VHLTVVYFGK	VHLTVVYFGK	3	VHLTVVYFGK3	3061.97	1429.88	
Q3T1J1	Q3T1J1;G3V7J7	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	0	VHLVGIDIFTGK	VHLVGIDIFTGK	2	VHLVGIDIFTGK2	565278	638900	463723
Q3T1J1	Q3T1J1;G3V7J7	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	0	VHLVGIDIFTGK	VHLVGIDIFTGK	3	VHLVGIDIFTGK3	2.56788e+06	2.73789e+06	2.50058e+06
Q3T1J1	Q3T1J1;G3V7J7	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	0	VHLVGIDIFTGKK	VHLVGIDIFTGKK	2	VHLVGIDIFTGKK2	24566	30108	16065.2
Q3T1J1	Q3T1J1;G3V7J7	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	0	VHLVGIDIFTGKK	VHLVGIDIFTGKK	3	VHLVGIDIFTGKK3	167370	182793	160252
D3ZEF9	D3ZEF9	D3ZEF9_RAT	B3gnt2	Hexosyltransferase	1	VHLYPIDDVYTGMCLQK	VHLYPIDDVYTGMC(UniMod:4)LQK	3	VHLYPIDDVYTGMC(UniMod:4)LQK3	48838.2	31949.6	24822.5
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	VHMEVMPLFAGYLPLPDVR	VHMEVMPLFAGYLPLPDVR	3	VHMEVMPLFAGYLPLPDVR3	11210.7	11484.4	9569.99
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	VHMFEAHSDYIR	VHMFEAHSDYIR	2	VHMFEAHSDYIR2	6884.61	2096.93	6575.03
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	VHMFEAHSDYIR	VHMFEAHSDYIR	3	VHMFEAHSDYIR3	80349.8	66805.2	46493
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	VHMTWVQPR	VHMTWVQPR	3	VHMTWVQPR3	59459.8	58953.7	59715.2
O35783	O35783	CALU_RAT	Calu	Calumenin	1	VHNDAQNFDYDHDAFLGAEEAK	VHNDAQNFDYDHDAFLGAEEAK	3	VHNDAQNFDYDHDAFLGAEEAK3	53801.8	52464.7	54893.6
O35783	O35783	CALU_RAT	Calu	Calumenin	1	VHNDAQNFDYDHDAFLGAEEAK	VHNDAQNFDYDHDAFLGAEEAK	4	VHNDAQNFDYDHDAFLGAEEAK4	60039.5	63718.1	64680.7
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	VHNIPVCK	VHNIPVC(UniMod:4)K	1	VHNIPVC(UniMod:4)K1	4366.15		976.267
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	VHNIPVCK	VHNIPVC(UniMod:4)K	2	VHNIPVC(UniMod:4)K2	195354	176828	141011
A0A8I5Y4X4	A0A8I5Y4X4	A0A8I5Y4X4_RAT	Nub1	Negative regulator of ubiquitin-like proteins 1	1	VHNLLQLGFTAQEAR	VHNLLQLGFTAQEAR	2	VHNLLQLGFTAQEAR2	2314.74	2792.11	2241.51
A0A8I5Y4X4	A0A8I5Y4X4	A0A8I5Y4X4_RAT	Nub1	Negative regulator of ubiquitin-like proteins 1	1	VHNLLQLGFTAQEAR	VHNLLQLGFTAQEAR	3	VHNLLQLGFTAQEAR3	11870.7	1029.96	19261
A0A8I6GJQ5	A0A8I6GJQ5	A0A8I6GJQ5_RAT	Heatr5b	HEAT repeat containing 5B	1	VHNLLVSSLDK	VHNLLVSSLDK	3	VHNLLVSSLDK3	21098.6	24921.1	23272.2
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	VHNPAGDR	VHNPAGDR	2	VHNPAGDR2			144379
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	VHNQCPDITR	VHNQC(UniMod:4)PDITR	2	VHNQC(UniMod:4)PDITR2	99562.4	40534.3	43096.4
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	VHNQCPDITR	VHNQC(UniMod:4)PDITR	3	VHNQC(UniMod:4)PDITR3	847668	424926	495494
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	VHNQFSLVSGEDAVNPPVIDK	VHNQFSLVSGEDAVNPPVIDK	3	VHNQFSLVSGEDAVNPPVIDK3	18665.4	10867.2	18473.2
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	VHNVAFAFELMLDGGLK	VHNVAFAFELMLDGGLK	2	VHNVAFAFELMLDGGLK2	13956.6	9673.44	5584.4
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	VHNVAFAFELMLDGGLK	VHNVAFAFELMLDGGLK	3	VHNVAFAFELMLDGGLK3	59001.1	43480.6	34563.6
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	VHNVAFAFELMLDGGLKKPK	VHNVAFAFELMLDGGLKKPK	4	VHNVAFAFELMLDGGLKKPK4	4213.27	2997.9	2200.02
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	VHNVEPVESAR	VHNVEPVESAR	2	VHNVEPVESAR2	69993.4	69060.7	35872.8
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	VHNVEPVESAR	VHNVEPVESAR	3	VHNVEPVESAR3	142763	218309	171992
A0A8I5Y9A0	A0A8I5Y9A0	A0A8I5Y9A0_RAT	Tex264	Testis expressed 264	1	VHPALDVYIK	VHPALDVYIK	3	VHPALDVYIK3	11827.5	8204.33	8077.44
Q63797	A0A0G2JVP9;Q63797	PSME1_RAT	Psme1	Proteasome activator complex subunit 1	0	VHPEAQAK	VHPEAQAK	1	VHPEAQAK1			2698.59
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	VHPEIPESMSAEAK	VHPEIPESMSAEAK	2	VHPEIPESMSAEAK2	8598.35	3793.42	
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	VHPEIPESMSAEAK	VHPEIPESMSAEAK	3	VHPEIPESMSAEAK3	52022.8	42819	55236.3
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	VHPEVQR	VHPEVQR	2	VHPEVQR2			119611
P04642	P04642;A0A8I6ASS6	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	VHPISTMIK	VHPISTMIK	2	VHPISTMIK2	445359	346288	352988
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	VHPLQIDQCGDTPHNTDGSDHAK	VHPLQIDQC(UniMod:4)GDTPHNTDGSDHAK	4	VHPLQIDQC(UniMod:4)GDTPHNTDGSDHAK4	8678.52	6446.03	3637.63
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	VHPNSVHICAVAVEYEAK	VHPNSVHIC(UniMod:4)AVAVEYEAK	4	VHPNSVHIC(UniMod:4)AVAVEYEAK4	22922.4	27334.3	25744.2
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	VHPPVPSSLSAEAQAFLLR	VHPPVPSSLSAEAQAFLLR	3	VHPPVPSSLSAEAQAFLLR3	10644.7	16233.5	11245.5
P51111	P51111	HD_RAT	Htt	Huntingtin	1	VHPSEDEILIQYLVPATCK	VHPSEDEILIQYLVPATC(UniMod:4)K	3	VHPSEDEILIQYLVPATC(UniMod:4)K3	8628.51	13903.8	9968.11
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	VHPTHASIR	VHPTHASIR	2	VHPTHASIR2			186568
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	VHQDEITQLSHLGQGTR	VHQDEITQLSHLGQGTR	3	VHQDEITQLSHLGQGTR3	5344.77	4351.5	
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	VHQDEITQLSHLGQGTR	VHQDEITQLSHLGQGTR	4	VHQDEITQLSHLGQGTR4	6694.25	5656.73	10747.8
P01026	P01026	CO3_RAT	C3	Complement C3	1	VHQFFNVGLIQPGSVK	VHQFFNVGLIQPGSVK	2	VHQFFNVGLIQPGSVK2	169269	138812	150528
P01026	P01026	CO3_RAT	C3	Complement C3	1	VHQFFNVGLIQPGSVK	VHQFFNVGLIQPGSVK	3	VHQFFNVGLIQPGSVK3	1.27486e+06	1.13487e+06	1.15977e+06
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	VHQLDVAIPLHLK	VHQLDVAIPLHLK	3	VHQLDVAIPLHLK3	24131.3	32553.2	35775
A0A8I6AS17	A0A8I6AS17	A0A8I6AS17_RAT	Bsdc1	BSD domain containing 1	1	VHQLEQEQAR	VHQLEQEQAR	2	VHQLEQEQAR2	15010.9		50766.2
A0A8I6AS17	A0A8I6AS17	A0A8I6AS17_RAT	Bsdc1	BSD domain containing 1	1	VHQLEQEQAR	VHQLEQEQAR	3	VHQLEQEQAR3	5711.44		14931.5
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	VHQLYETIQR	VHQLYETIQR	2	VHQLYETIQR2	60276.7	45092.1	49305.4
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	VHQLYETIQR	VHQLYETIQR	3	VHQLYETIQR3	216711	220476	223845
Q62840	Q62840	AMBN_RAT	Ambn	Ameloblastin	1	VHQPQVHNAWR	VHQPQVHNAWR	3	VHQPQVHNAWR3	12218.3	5194.45	9303.58
P24329	P24329	THTR_RAT	Tst	Thiosulfate sulfurtransferase	1	VHQVLYR	VHQVLYR	2	VHQVLYR2	21281	13471.1	17861.5
A0A8I5ZV13	A0A8I5ZV13	A0A8I5ZV13_RAT	Mettl13	EEF1A lysine and N-terminal methyltransferase	1	VHQVTNSQDQVSEAEPR	VHQVTNSQDQVSEAEPR	3	VHQVTNSQDQVSEAEPR3	1960.65		3727.4
A0A8I6AJ04	A0A8I6AJ04	A0A8I6AJ04_RAT	Pithd1	PITH domain containing 1	1	VHQVTPQTHFIS	VHQVTPQTHFIS	3	VHQVTPQTHFIS3	5755.26	3740.3	1963.08
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	VHRGELDAHLGLLGPYIR	VHRGELDAHLGLLGPYIR	4	VHRGELDAHLGLLGPYIR4	23108.1	35927	42437.5
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	VHSAVGQGVPR	VHSAVGQGVPR	2	VHSAVGQGVPR2	5654.64	7152.73	3273.47
Q8CGZ2	Q8CGZ2	ADIP_RAT	Ssx2ip	Afadin- and alpha-actinin-binding protein	1	VHSEGFHEEDVISR	VHSEGFHEEDVISR	3	VHSEGFHEEDVISR3	3699.42	3676.7	
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	VHSEVASLDSR	VHSEVASLDSR	3	VHSEVASLDSR3	13603.2	15043.5	15299.6
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	VHSFPTLK	VHSFPTLK	1	VHSFPTLK1	19826.6	11873.8	5449.77
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	VHSFPTLK	VHSFPTLK	2	VHSFPTLK2	965960	905888	754268
Q5XFW6	Q5XFW6	WDR6_RAT	Wdr6	WD repeat-containing protein 6	1	VHSFTHEAPNQR	VHSFTHEAPNQR	2	VHSFTHEAPNQR2	973.45		
Q5XFW6	Q5XFW6	WDR6_RAT	Wdr6	WD repeat-containing protein 6	1	VHSFTHEAPNQR	VHSFTHEAPNQR	3	VHSFTHEAPNQR3	25642.4	20546.5	15039.2
A0A8I5ZV31	A0A8I5ZV31	A0A8I5ZV31_RAT	Atp11c	Phospholipid-transporting ATPase	1	VHSHEIDLTK	VHSHEIDLTK	3	VHSHEIDLTK3	7538.77		6878.45
Q5XFW6	Q5XFW6	WDR6_RAT	Wdr6	WD repeat-containing protein 6	1	VHSLSWALR	VHSLSWALR	2	VHSLSWALR2	6426.34	4227.19	4809.72
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	VHSPNVR	VHSPNVR	2	VHSPNVR2			77464.5
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	VHSPQQVDFR	VHSPQQVDFR	2	VHSPQQVDFR2	13348.9	12689	22196.8
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	VHSPQQVDFR	VHSPQQVDFR	3	VHSPQQVDFR3	144945	118900	179529
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VHSPSGALEECYVTEIDQDK	VHSPSGALEEC(UniMod:4)YVTEIDQDK	3	VHSPSGALEEC(UniMod:4)YVTEIDQDK3	257784	214751	221740
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VHSPSGALEECYVTEIDQDKYAVR	VHSPSGALEEC(UniMod:4)YVTEIDQDKYAVR	3	VHSPSGALEEC(UniMod:4)YVTEIDQDKYAVR3	9819.04	2279.44	14455.8
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VHSPSGALEECYVTEIDQDKYAVR	VHSPSGALEEC(UniMod:4)YVTEIDQDKYAVR	4	VHSPSGALEEC(UniMod:4)YVTEIDQDKYAVR4	20751.3	22942.1	34977.8
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	VHSPSGAVEECHVSELEPDK	VHSPSGAVEEC(UniMod:4)HVSELEPDK	3	VHSPSGAVEEC(UniMod:4)HVSELEPDK3	10787.7	6066.46	1497.82
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	VHSPSGAVEECHVSELEPDK	VHSPSGAVEEC(UniMod:4)HVSELEPDK	4	VHSPSGAVEEC(UniMod:4)HVSELEPDK4	17738		6912.61
Q5BJT7	Q5BJT7	CCD93_RAT	Ccdc93	Coiled-coil domain-containing protein 93	1	VHSTLLEYGR	VHSTLLEYGR	3	VHSTLLEYGR3	9360.45		7863.84
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	VHSVGGQGSWTPEVIK	VHSVGGQGSWTPEVIK	2	VHSVGGQGSWTPEVIK2	41210	26705.5	34762.6
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	VHSVGGQGSWTPEVIK	VHSVGGQGSWTPEVIK	3	VHSVGGQGSWTPEVIK3	24514.1	61763.1	37296.3
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	VHTAFER	VHTAFER	2	VHTAFER2	24817.7	25410.1	23321.5
F7EM42	F7EM42	F7EM42_RAT	Sash3	SAM and SH3 domain containing 3	1	VHTDFTPSPYDHDSLK	VHTDFTPSPYDHDSLK	3	VHTDFTPSPYDHDSLK3	11844	15951.7	14370.2
F7EM42	F7EM42	F7EM42_RAT	Sash3	SAM and SH3 domain containing 3	1	VHTDFTPSPYDHDSLK	VHTDFTPSPYDHDSLK	4	VHTDFTPSPYDHDSLK4	39227.3	42170	19971.3
O08775	O08775	VGFR2_RAT	Kdr	Vascular endothelial growth factor receptor 2	1	VHTKPFIAFGSGMK	VHTKPFIAFGSGMK	3	VHTKPFIAFGSGMK3	42910.1	19621.9	24353.1
O08775	O08775	VGFR2_RAT	Kdr	Vascular endothelial growth factor receptor 2	1	VHTKPFIAFGSGMK	VHTKPFIAFGSGMK	4	VHTKPFIAFGSGMK4	2553.1	4620.45	
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	VHTSLYECPIESSPLFLLHK	VHTSLYEC(UniMod:4)PIESSPLFLLHK	4	VHTSLYEC(UniMod:4)PIESSPLFLLHK4	6074.41	6813.83	8405.26
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	VHTVEDYQAIVDAEWNILYDK	VHTVEDYQAIVDAEWNILYDK	3	VHTVEDYQAIVDAEWNILYDK3	51579.8	73991.2	72013.9
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	VHVDCMTSQK	VHVDC(UniMod:4)MTSQK	2	VHVDC(UniMod:4)MTSQK2	12538.1	12634.9	4973.97
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	VHVDCMTSQK	VHVDC(UniMod:4)MTSQK	3	VHVDC(UniMod:4)MTSQK3	7369.8	18631.4	13384.5
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	VHVFYIDYGNR	VHVFYIDYGNR	2	VHVFYIDYGNR2	36303.7	28045.1	21642.8
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	VHVFYIDYGNR	VHVFYIDYGNR	3	VHVFYIDYGNR3	82155.9	95769.9	65110
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	VHVGSPAGPR	VHVGSPAGPR	2	VHVGSPAGPR2	4633.92	2988.05	4516.42
P18418	P18418	CALR_RAT	Calr	Calreticulin	1	VHVIFNYK	VHVIFNYK	2	VHVIFNYK2	149229	102195	83311.5
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	VHVLYSTPSCYLWELNK	VHVLYSTPSC(UniMod:4)YLWELNK	3	VHVLYSTPSC(UniMod:4)YLWELNK3	6060.65	4407.14	9061.21
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	VHVTQEDFEMAVAK	VHVTQEDFEMAVAK	2	VHVTQEDFEMAVAK2	15589.2	6093.45	8002.23
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	VHVTQEDFEMAVAK	VHVTQEDFEMAVAK	3	VHVTQEDFEMAVAK3	41797	33732.1	47673.5
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	VHVVDLK	VHVVDLK	2	VHVVDLK2	16400.9	12385.9	13745.1
O70540	O70540	MADCA_RAT	Madcam1	Mucosal addressin cell adhesion molecule 1	1	VHWHGLDTNLGNVQTLPGSR	VHWHGLDTNLGNVQTLPGSR	3	VHWHGLDTNLGNVQTLPGSR3	12673.9	12369.6	8956.67
O70540	O70540	MADCA_RAT	Madcam1	Mucosal addressin cell adhesion molecule 1	1	VHWHGLDTNLGNVQTLPGSR	VHWHGLDTNLGNVQTLPGSR	4	VHWHGLDTNLGNVQTLPGSR4	104849	116733	96346.9
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	VHYENNSPFLTITSMTR	VHYENNSPFLTITSMTR	3	VHYENNSPFLTITSMTR3	199571	174814	199602
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	VHYPSALGHLAIR	VHYPSALGHLAIR	3	VHYPSALGHLAIR3	15156.6	20972.3	
A0A0G2K9V1	A0A0G2K9V1	A0A0G2K9V1_RAT	Ndufa1	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1	1	VHYQWYLMER	VHYQWYLMER	2	VHYQWYLMER2	12601.4	7301.39	5418.26
A0A0G2K9V1	A0A0G2K9V1	A0A0G2K9V1_RAT	Ndufa1	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1	1	VHYQWYLMER	VHYQWYLMER	3	VHYQWYLMER3	25683.7	40561.3	30893.6
B0BNC9	B0BNC9	QORL2_RAT		Quinone oxidoreductase-like protein 2	1	VIAAAGSDEK	VIAAAGSDEK	2	VIAAAGSDEK2		17910.8	
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VIAADKDEGPNAELSYSIEEGNEHGR	VIAADKDEGPNAELSYSIEEGNEHGR	4	VIAADKDEGPNAELSYSIEEGNEHGR4	35180.4	30365.8	29561.1
A0A8I5ZV26	A0A8I5ZV26	A0A8I5ZV26_RAT	Stom	Stomatin	1	VIAAEGEMNASR	VIAAEGEMNASR	2	VIAAEGEMNASR2	330811	310278	346514
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	VIAALLQTMEDQGNQR	VIAALLQTMEDQGNQR	2	VIAALLQTMEDQGNQR2	38468.9	67884.2	61667
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	VIAALLQTMEDQGNQR	VIAALLQTMEDQGNQR	3	VIAALLQTMEDQGNQR3	30845.9	34508.4	42750.1
P62944	P62944	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	1	VIAAMTVGK	VIAAMTVGK	2	VIAAMTVGK2	126078	116809	107875
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	VIAATNRVDILDPALLR	VIAATNRVDILDPALLR	3	VIAATNRVDILDPALLR3	34648	30070.3	37839.8
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	VIACELGSLPELK	VIAC(UniMod:4)ELGSLPELK	2	VIAC(UniMod:4)ELGSLPELK2	27641.5	30400.3	28254.5
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	VIACELGSLPELKK	VIAC(UniMod:4)ELGSLPELKK	3	VIAC(UniMod:4)ELGSLPELKK3	29789.4	29098.9	24400.1
F2Z3T4	F2Z3T4;A0A0G2JX72	MBNL2_RAT	Mbnl2	Muscleblind-like protein 2	0	VIACFDSLK	VIAC(UniMod:4)FDSLK	2	VIAC(UniMod:4)FDSLK2	76430.2	84027.6	53893
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	VIAGIGLAK	VIAGIGLAK	2	VIAGIGLAK2	991327	1.12506e+06	993481
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	VIAGQFFGHHHTDSFR	VIAGQFFGHHHTDSFR	3	VIAGQFFGHHHTDSFR3	111355	81729.3	97585.8
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	VIAGQFFGHHHTDSFR	VIAGQFFGHHHTDSFR	4	VIAGQFFGHHHTDSFR4	113304	123417	103573
Q5XI83	Q5XI83	VP35L_RAT	Vps35l	VPS35 endosomal protein-sorting factor-like	1	VIAHFHDFSVLFSVEK	VIAHFHDFSVLFSVEK	4	VIAHFHDFSVLFSVEK4	1140.13		
Q5M9F6	Q5M9F6	Q5M9F6_RAT	Mthfs	5-formyltetrahydrofolate cyclo-ligase	1	VIAHSQYQNSK	VIAHSQYQNSK	3	VIAHSQYQNSK3			10053.5
F7EPH4	F7EPH4	F7EPH4_RAT	Ppa1	inorganic diphosphatase	1	VIAINVDDPDAANYHDISDVER	VIAINVDDPDAANYHDISDVER	3	VIAINVDDPDAANYHDISDVER3	23434.3	10565.8	13993.1
A0A8I6A7I6	A0A8I6A7I6	A0A8I6A7I6_RAT	Immp2l	Inner mitochondrial membrane peptidase subunit 2	1	VIALEGDIIRPIGYK	VIALEGDIIRPIGYK	3	VIALEGDIIRPIGYK3	5014.38	10759.5	13507.5
A0A8I6AC50	A0A8I6AC50	A0A8I6AC50_RAT	Ttc13	Tetratricopeptide repeat domain 13	1	VIALEPDRPEVFEQR	VIALEPDRPEVFEQR	3	VIALEPDRPEVFEQR3	17852.8	16658.9	25562.9
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	VIALGLPVPR	VIALGLPVPR	2	VIALGLPVPR2	19163.6	17699.8	27295.7
A0A8I6AD03	A0A8I6AD03	A0A8I6AD03_RAT	Aplp1	Amyloid beta precursor like protein 1	1	VIALINDQR	VIALINDQR	2	VIALINDQR2	110112	82614	85648.7
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	VIALYDFEAR	VIALYDFEAR	2	VIALYDFEAR2	53956.9	40038.3	54262.5
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	VIAPTNAEVLPILPEPESLELK	VIAPTNAEVLPILPEPESLELK	3	VIAPTNAEVLPILPEPESLELK3	10098.2	10443.9	9313.45
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	VIAPTNAEVLPILPEPESLELKK	VIAPTNAEVLPILPEPESLELKK	3	VIAPTNAEVLPILPEPESLELKK3	12785.6	20188.3	16808.8
Q3SWT0	Q3SWT0	PECA1_RAT	Pecam1	Platelet endothelial cell adhesion molecule	1	VIAPVDEVTISILSGNDVQSGDEMVLR	VIAPVDEVTISILSGNDVQSGDEMVLR	3	VIAPVDEVTISILSGNDVQSGDEMVLR3	5537.32	7553.24	2655.03
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	VIAQLETR	VIAQLETR	2	VIAQLETR2	114295	118835	118948
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	VIAQTVYGAK	VIAQTVYGAK	2	VIAQTVYGAK2	46199.8	53664.2	51107
P52303	P52303	AP1B1_RAT	Ap1b1	AP-1 complex subunit beta-1	1	VIASMTVGK	VIASMTVGK	2	VIASMTVGK2	271807	259593	230628
Q5U2R9	Q5U2R9	Q5U2R9_RAT	Scfd2	Sec1 family domain containing 2	1	VIATDLANYAPAK	VIATDLANYAPAK	2	VIATDLANYAPAK2	13812	16069.2	14365.7
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	VIATLLR	VIATLLR	2	VIATLLR2	90511.1	123905	88793.2
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	VIAVADDFCK	VIAVADDFC(UniMod:4)K	2	VIAVADDFC(UniMod:4)K2	79036.8	116819	89463.2
O70467	O70467	ANM3_RAT	Prmt3	Protein arginine N-methyltransferase 3	1	VIAVDQSEILYQAMDIIR	VIAVDQSEILYQAMDIIR	3	VIAVDQSEILYQAMDIIR3	3936.61		7276.68
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	VIAVYDLGGGTFDISILEIQK	VIAVYDLGGGTFDISILEIQK	3	VIAVYDLGGGTFDISILEIQK3	4018.39	4008.29	2921.12
A0A8I5ZVT2	A0A8I5ZVT2	A0A8I5ZVT2_RAT	Fndc3a	Fibronectin type III domain containing 3a	1	VIAYNSEGK	VIAYNSEGK	2	VIAYNSEGK2	17482.3	14042.4	15079.8
Q4V7C6	Q4V7C6	GUAA_RAT	Gmps	GMP synthase [glutamine-hydrolyzing]	1	VICAEEPYICK	VIC(UniMod:4)AEEPYIC(UniMod:4)K	2	VIC(UniMod:4)AEEPYIC(UniMod:4)K2	2978.26	3937.08	2190.61
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	VICAGYK	VIC(UniMod:4)AGYK	2	VIC(UniMod:4)AGYK2	63082.4	78000.5	74562.7
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	VICALTSR	VIC(UniMod:4)ALTSR	2	VIC(UniMod:4)ALTSR2	23257.2	32745.1	30147.4
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	VICILSHPIK	VIC(UniMod:4)ILSHPIK	3	VIC(UniMod:4)ILSHPIK3	76093.3	82316.5	76302.9
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	VICLPGR	VIC(UniMod:4)LPGR	2	VIC(UniMod:4)LPGR2	223990	291440	254833
Q5RJQ4	Q5RJQ4	SIR2_RAT	Sirt2	NAD-dependent protein deacetylase sirtuin-2	1	VICLVGAGISTSAGIPDFR	VIC(UniMod:4)LVGAGISTSAGIPDFR	2	VIC(UniMod:4)LVGAGISTSAGIPDFR2	7957.11	3978.74	
P13086	P13086	SUCA_RAT	Suclg1	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial	1	VICQGFTGK	VIC(UniMod:4)QGFTGK	2	VIC(UniMod:4)QGFTGK2	242906	286662	283932
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	VICQSSELYK	VIC(UniMod:4)QSSELYK	2	VIC(UniMod:4)QSSELYK2	49683.6	66544.1	48490.2
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	VICQWQQQDHSSSR	VIC(UniMod:4)QWQQQDHSSSR	2	VIC(UniMod:4)QWQQQDHSSSR2	2697.9	1778.41	712.366
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	VICQWQQQDHSSSR	VIC(UniMod:4)QWQQQDHSSSR	3	VIC(UniMod:4)QWQQQDHSSSR3	64949	76066.4	116119
B2RYW9	B2RYW9	FAHD2_RAT	Fahd2	Fumarylacetoacetate hydrolase domain-containing protein 2	1	VICVGLNYADHCQEQNVR	VIC(UniMod:4)VGLNYADHC(UniMod:4)QEQNVR	3	VIC(UniMod:4)VGLNYADHC(UniMod:4)QEQNVR3	59422.8	106774	65514.5
D3ZA88	D3ZA88	D3ZA88_RAT	Trim34	Tripartite motif-containing 34	1	VICWVCER	VIC(UniMod:4)WVC(UniMod:4)ER	2	VIC(UniMod:4)WVC(UniMod:4)ER2	4540.8		4150.75
Q6Q0N0	Q6Q0N0	CSTN1_RAT	Clstn1	Calsyntenin-1	1	VIDCLYTCK	VIDC(UniMod:4)LYTC(UniMod:4)K	2	VIDC(UniMod:4)LYTC(UniMod:4)K2	7635.7	5722.82	
Q68FU3	Q68FU3	ETFB_RAT	Etfb	Electron transfer flavoprotein subunit beta	1	VIDFAVK	VIDFAVK	2	VIDFAVK2	130284	109234	106371
B2GV15	B2GV15	B2GV15_RAT	Dbt	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	VIDGATMSR	VIDGATMSR	2	VIDGATMSR2	45449.7	43141.4	41675.1
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	VIDGTSGATLQASALSAK	VIDGTSGATLQASALSAK	2	VIDGTSGATLQASALSAK2	5765.74	9476.76	5982.99
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	VIDGTSGATLQASALSAKPGGQVK	VIDGTSGATLQASALSAKPGGQVK	3	VIDGTSGATLQASALSAKPGGQVK3	17547	10183.5	9075.13
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	VIDHAIETEK	VIDHAIETEK	2	VIDHAIETEK2	8282.97	11021.6	10190.9
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	VIDHAIETEK	VIDHAIETEK	3	VIDHAIETEK3	164663	230342	193859
Q5PQR3	Q5PQR3	BTBD9_RAT	Btbd9	BTB/POZ domain-containing protein 9	1	VIDHSHYLCR	VIDHSHYLC(UniMod:4)R	3	VIDHSHYLC(UniMod:4)R3	3152.7	3461.38	7870.06
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	VIDKDGIHNLENITFTK	VIDKDGIHNLENITFTK	2	VIDKDGIHNLENITFTK2	34331.4	40415.6	21972
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	VIDKDGIHNLENITFTK	VIDKDGIHNLENITFTK	3	VIDKDGIHNLENITFTK3	713832	985426	1.03157e+06
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	VIDKDGIHNLENITFTK	VIDKDGIHNLENITFTK	4	VIDKDGIHNLENITFTK4	2.00705e+06	45610.9	2.31111e+06
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	VIDKDGIHNLENITFTKR	VIDKDGIHNLENITFTKR	4	VIDKDGIHNLENITFTKR4	23763.8	19252.7	18265
P00758	P00758	KLK1_RAT	Ngfg	Kallikrein-1	1	VIDLPIEEPK	VIDLPIEEPK	2	VIDLPIEEPK2	35765.1	35498.3	18731.8
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	VIDLVNK	VIDLVNK	2	VIDLVNK2	146741	165274	186091
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	VIDLVNKEDVQISTTQVAEIVATLEKEEK	VIDLVNKEDVQISTTQVAEIVATLEKEEK	4	VIDLVNKEDVQISTTQVAEIVATLEKEEK4	8175.98	3064.61	
P0CE43	P0CE43	GRB10_RAT	Grb10	Growth factor receptor-bound protein 10	1	VIDNPAEAQSAALEEGHAWR	VIDNPAEAQSAALEEGHAWR	3	VIDNPAEAQSAALEEGHAWR3	38220.4	27711.3	31822.9
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	VIDPATATSVDLR	VIDPATATSVDLR	2	VIDPATATSVDLR2	350307	319732	260881
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	VIDPATATSVDLR	VIDPATATSVDLR	3	VIDPATATSVDLR3	12238.1	9145.21	15882.7
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	VIDPVAPR	VIDPVAPR	2	VIDPVAPR2	93752.8	78796.8	79283
Q5M7W7	Q5M7W7	SYPM_RAT	Pars2	Probable proline--tRNA ligase, mitochondrial	1	VIDQEMQAIGGQK	VIDQEMQAIGGQK	2	VIDQEMQAIGGQK2	7937.59	3530.94	2423.79
Q7TP21	Q7TP21	Q7TP21_RAT	Rpa1	Replication protein A subunit	1	VIDQQNGLYR	VIDQQNGLYR	2	VIDQQNGLYR2	3214.97	4283.54	
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	VIDRIDVCPENAEITLTDFR	VIDRIDVC(UniMod:4)PENAEITLTDFR	3	VIDRIDVC(UniMod:4)PENAEITLTDFR3	1.21116e+06	1.28102e+06	1.23283e+06
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	VIDRIDVCPENAEITLTDFR	VIDRIDVC(UniMod:4)PENAEITLTDFR	4	VIDRIDVC(UniMod:4)PENAEITLTDFR4	8445.72	9048.67	8037.13
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VIDTNDHRPQFSTSK	VIDTNDHRPQFSTSK	3	VIDTNDHRPQFSTSK3	32975.8	33215.9	50226.5
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VIDTNDHRPQFSTSK	VIDTNDHRPQFSTSK	4	VIDTNDHRPQFSTSK4	32175.1	33892.9	42167.9
D3ZX38	D3ZX38	D3ZX38_RAT	Pfdn1	Prefoldin subunit 1	1	VIDTQQK	VIDTQQK	1	VIDTQQK1			3776.24
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	VIDVEPPVIDWCR	VIDVEPPVIDWC(UniMod:4)R	2	VIDVEPPVIDWC(UniMod:4)R2	43902.5	51622.9	40712.4
Q4V8E2	Q4V8E2	Q4V8E2_RAT	Psmd14	Proteasome 26S subunit, non-ATPase 14	1	VIDVFAMPQSGTGVSVEAVDPVFQAK	VIDVFAMPQSGTGVSVEAVDPVFQAK	3	VIDVFAMPQSGTGVSVEAVDPVFQAK3	27203	33685.7	28063.4
Q5XI39	Q5XI39	Q5XI39_RAT	Cryzl1	Crystallin zeta like 1	1	VIDVSSGK	VIDVSSGK	2	VIDVSSGK2	38305.2	33536	30188.1
B1WBY5	B1WBY5	B1WBY5_RAT	Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	1	VIDVTVPLQCLVK	VIDVTVPLQC(UniMod:4)LVK	2	VIDVTVPLQC(UniMod:4)LVK2	16440	13908	21567
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	VIEALQGMFIR	VIEALQGMFIR	2	VIEALQGMFIR2	10828.3	9334.65	9554.34
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	VIEAVSEELSR	VIEAVSEELSR	2	VIEAVSEELSR2	3961.42	4550.17	
O55043	O55043	ARHG7_RAT	Arhgef7	Rho guanine nucleotide exchange factor 7	1	VIEAYCTSAK	VIEAYC(UniMod:4)TSAK	2	VIEAYC(UniMod:4)TSAK2	21918.3	34218.5	29966.8
Q5XXR3	Q5XXR3	ARHG6_RAT	Arhgef6	Rho guanine nucleotide exchange factor 6	1	VIEAYCTSASFQQGTR	VIEAYC(UniMod:4)TSASFQQGTR	2	VIEAYC(UniMod:4)TSASFQQGTR2	1043.07	777.248	
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	VIECNVR	VIEC(UniMod:4)NVR	2	VIEC(UniMod:4)NVR2	100383	77409.6	117770
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	VIEDDCR	VIEDDC(UniMod:4)R	2	VIEDDC(UniMod:4)R2	587329	572421	667874
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	VIEDNEYTAR	VIEDNEYTAR	2	VIEDNEYTAR2	1.22851e+06	1.24128e+06	1.33777e+06
Q66HC5	Q66HC5	NUP93_RAT	Nup93	Nuclear pore complex protein Nup93	1	VIEDRDSQLR	VIEDRDSQLR	3	VIEDRDSQLR3	8579.32	17332.6	20009.5
Q5U2P0	Q5U2P0	DI3L1_RAT	Dis3l	DIS3-like exonuclease 1	1	VIEEEHQEYR	VIEEEHQEYR	3	VIEEEHQEYR3	4641.91	3979.15	2702.82
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	VIEELREQLK	VIEELREQLK	2	VIEELREQLK2	5280	3242.67	3208.24
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	VIEEQMEPALEK	VIEEQMEPALEK	2	VIEEQMEPALEK2	5801.04	7021.77	13047.3
O70196	O70196	PPCE_RAT	Prep	Prolyl endopeptidase	1	VIEEVSDMFAFIAR	VIEEVSDMFAFIAR	3	VIEEVSDMFAFIAR3	1581.47		2824.79
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	VIEEVTQDQK	VIEEVTQDQK	2	VIEEVTQDQK2	24810.9	27295.1	29290.1
A0A8I6A6W3	A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	1	VIEGDVVSALNK	VIEGDVVSALNK	2	VIEGDVVSALNK2	1.26427e+06	1.14034e+06	1.3504e+06
A0A8I6A6W3	A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	1	VIEGDVVSALNK	VIEGDVVSALNK	3	VIEGDVVSALNK3	26482.6	17260.5	20461.2
Q5U2V1	Q5U2V1	Q5U2V1_RAT	Fkbp10	peptidylprolyl isomerase	1	VIEGLDR	VIEGLDR	2	VIEGLDR2	11106.2	8004.35	10645.1
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	VIEGQTDPDYQLLGQR	VIEGQTDPDYQLLGQR	2	VIEGQTDPDYQLLGQR2	36835	41237.1	38373.1
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	VIEGQTDPDYQLLGQR	VIEGQTDPDYQLLGQR	3	VIEGQTDPDYQLLGQR3	69156.7	85192.4	73243.2
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	VIEGSFVYK	VIEGSFVYK	2	VIEGSFVYK2	69953.5	67193.2	72286.8
A0A8I5ZM64	A0A8I5ZM64	A0A8I5ZM64_RAT	Rcbtb1	RCC1 and BTB domain containing protein 1	1	VIEIAACHSTHTSAAK	VIEIAAC(UniMod:4)HSTHTSAAK	4	VIEIAAC(UniMod:4)HSTHTSAAK4	9531.43	3620.06	3326.99
P28075	P28075	PSB5_RAT	Psmb5	Proteasome subunit beta type-5	1	VIEINPYLLGTMAGGAADCSFWER	VIEINPYLLGTMAGGAADC(UniMod:4)SFWER	3	VIEINPYLLGTMAGGAADC(UniMod:4)SFWER3	75279	67126.8	71447.9
P28064	P28064	PSB8_RAT	Psmb8	Proteasome subunit beta type-8	1	VIEINPYLLGTMSGCAADCQYWER	VIEINPYLLGTMSGC(UniMod:4)AADC(UniMod:4)QYWER	3	VIEINPYLLGTMSGC(UniMod:4)AADC(UniMod:4)QYWER3	292262	210390	313359
Q6AYQ1	Q6AYQ1	GOGA7_RAT	Golga7	Golgin subfamily A member 7	1	VIEITIYEDR	VIEITIYEDR	2	VIEITIYEDR2	27522.9	22773.6	29283.7
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	VIEKAQQIQVLQK	VIEKAQQIQVLQK	3	VIEKAQQIQVLQK3	7836.26		5433.28
P37727	P37727	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	1	VIELCSSTMTCMK	VIELC(UniMod:4)SSTMTC(UniMod:4)MK	2	VIELC(UniMod:4)SSTMTC(UniMod:4)MK2		3398.53	
Q6AYG5	Q6AYG5	ECHD1_RAT	Echdc1	Ethylmalonyl-CoA decarboxylase	1	VIELENWTEGK	VIELENWTEGK	2	VIELENWTEGK2	42952.5	38994.1	37998.1
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	VIELTGDVTPDMK	VIELTGDVTPDMK	2	VIELTGDVTPDMK2	20297.4	20458	20066.9
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	VIEPFSR	VIEPFSR	2	VIEPFSR2	114022	101181	109809
O35824	O35824	DNJA2_RAT	Dnaja2	DnaJ homolog subfamily A member 2	1	VIEPGCVR	VIEPGC(UniMod:4)VR	2	VIEPGC(UniMod:4)VR2	449885	445956	422334
P49186	P49186	MK09_RAT	Mapk9	Mitogen-activated protein kinase 9	1	VIEQLGTPSAEFMK	VIEQLGTPSAEFMK	2	VIEQLGTPSAEFMK2	9662.04	8610.29	8040.16
A0A8I6GAE6	A0A8I6GAE6	A0A8I6GAE6_RAT	Ddx19b	RNA helicase	1	VIEQMGK	VIEQMGK	2	VIEQMGK2	18349	21693.5	
P25236	P25236	SEPP1_RAT	Selenop	Selenoprotein P	1	VIESCQCR	VIESC(UniMod:4)QC(UniMod:4)R	2	VIESC(UniMod:4)QC(UniMod:4)R2	437435		393884
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	VIESTQDLGNDLAGVMALQR	VIESTQDLGNDLAGVMALQR	3	VIESTQDLGNDLAGVMALQR3	414576	416896	465370
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	VIETLSR	VIETLSR	2	VIETLSR2	273464	336067	320513
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	VIETVVISETGESPECVGAHLLPAEK	VIETVVISETGESPEC(UniMod:4)VGAHLLPAEK	3	VIETVVISETGESPEC(UniMod:4)VGAHLLPAEK3	25656.5	25566.9	23991.1
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	VIETVVISETGESPECVGAHLLPAEK	VIETVVISETGESPEC(UniMod:4)VGAHLLPAEK	4	VIETVVISETGESPEC(UniMod:4)VGAHLLPAEK4	6054.92		10196.8
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	VIEVELAK	VIEVELAK	2	VIEVELAK2	98530.9	105072	97759.2
Q5U2Q3	Q5U2Q3	CK054_RAT		Ester hydrolase C11orf54 homolog	1	VIEVQAK	VIEVQAK	2	VIEVQAK2	13675.8	13026.5	11917.3
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	VIEVSHWGNIAVEENVDLK	VIEVSHWGNIAVEENVDLK	3	VIEVSHWGNIAVEENVDLK3	62746.1	46908.7	61246.4
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	VIEYTDLEK	VIEYTDLEK	2	VIEYTDLEK2	80411.8	96349.2	102084
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	VIFDASSPVIVK	VIFDASSPVIVK	2	VIFDASSPVIVK2	32063.2	38341.1	41139.7
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	VIFELTYEELLK	VIFELTYEELLK	2	VIFELTYEELLK2	1.53295e+06	1.92995e+06	1.59114e+06
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	VIFELTYEELLK	VIFELTYEELLK	3	VIFELTYEELLK3	343604	413996	177310
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	VIFELTYEELLKR	VIFELTYEELLKR	2	VIFELTYEELLKR2	1.40234e+06	1.42914e+06	1.8148e+06
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	VIFELTYEELLKR	VIFELTYEELLKR	3	VIFELTYEELLKR3	1.14586e+06	1.25898e+06	1.00119e+06
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	VIFFLPWEK	VIFFLPWEK	2	VIFFLPWEK2	107647	122283	125610
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	VIFGQYCECDNFNCER	VIFGQYC(UniMod:4)EC(UniMod:4)DNFNC(UniMod:4)ER	3	VIFGQYC(UniMod:4)EC(UniMod:4)DNFNC(UniMod:4)ER3	9626.57	7734.53	6391.58
A2RRU1	A2RRU1	GYS1_RAT	Gys1	Glycogen [starch] synthase, muscle	1	VIFHPEFLSSTSPLLPVDYEEFVR	VIFHPEFLSSTSPLLPVDYEEFVR	3	VIFHPEFLSSTSPLLPVDYEEFVR3	9280.11	8537.36	12350.1
A0A8I6GAD6	A0A8I6GAD6	A0A8I6GAD6_RAT	Nrbp1	Nuclear receptor binding protein 1	1	VIFITEYMSSGSLK	VIFITEYMSSGSLK	2	VIFITEYMSSGSLK2	120219	131410	115541
A0A8I6GAD6	A0A8I6GAD6	A0A8I6GAD6_RAT	Nrbp1	Nuclear receptor binding protein 1	1	VIFITEYMSSGSLK	VIFITEYMSSGSLK	3	VIFITEYMSSGSLK3	7068.32	14792.1	6200.84
A0A0G2JTX7	A0A0G2JTX7	A0A0G2JTX7_RAT	Col6a5	Collagen type VI alpha 5 chain	1	VIFIVTAGETNPLDK	VIFIVTAGETNPLDK	2	VIFIVTAGETNPLDK2	4179.22	4086.46	3496.22
A0A0G2JTX7	A0A0G2JTX7	A0A0G2JTX7_RAT	Col6a5	Collagen type VI alpha 5 chain	1	VIFIVTAGETNPLDKEVLR	VIFIVTAGETNPLDKEVLR	3	VIFIVTAGETNPLDKEVLR3	34370.8	38772.8	44678.7
P09811	P53534;P09811;P09812	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	0	VIFLENYR	VIFLENYR	2	VIFLENYR2	371542	364078	354210
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	VIFLITDGYSNGGDPRPIAASLR	VIFLITDGYSNGGDPRPIAASLR	3	VIFLITDGYSNGGDPRPIAASLR3	19152.5	6300	9919.64
Q6AXM5	Q6AXM5	CEPT1_RAT	Cept1	Choline/ethanolaminephosphotransferase 1	1	VIFTGGVGK	VIFTGGVGK	2	VIFTGGVGK2	22044.3	22329.5	14063.5
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	VIFVDDYAVGCR	VIFVDDYAVGC(UniMod:4)R	2	VIFVDDYAVGC(UniMod:4)R2	24734.6	19542	19213.4
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	VIFVGEDAVDAGGVRK	VIFVGEDAVDAGGVRK	3	VIFVGEDAVDAGGVRK3	6564.88	4251.44	12199.3
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	VIGDGNFAVVK	VIGDGNFAVVK	2	VIGDGNFAVVK2	111045	94010.4	117294
D4A7D3	D4A7D3	D4A7D3_RAT	Tbk1	TANK-binding kinase 1	1	VIGEDGQSVYK	VIGEDGQSVYK	2	VIGEDGQSVYK2	8723.6	9750.21	
P27605	P27605	HPRT_RAT	Hprt1	Hypoxanthine-guanine phosphoribosyltransferase	1	VIGGDDLSTLTGK	VIGGDDLSTLTGK	2	VIGGDDLSTLTGK2	81136.7	78892.4	72622.4
P22062	P22062	PIMT_RAT	Pcmt1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase	1	VIGIDHIK	VIGIDHIK	2	VIGIDHIK2	40173.1	41743.5	40965.7
Q63009	Q63009	ANM1_RAT	Prmt1	Protein arginine N-methyltransferase 1	1	VIGIECSSISDYAVK	VIGIEC(UniMod:4)SSISDYAVK	2	VIGIEC(UniMod:4)SSISDYAVK2	28161.2	30982.1	39641.2
D4AC36	D4AC36	D4AC36_RAT	Eif3f	Eukaryotic translation initiation factor 3 subunit F	1	VIGLSSDLQQVGGASAR	VIGLSSDLQQVGGASAR	2	VIGLSSDLQQVGGASAR2	72861.5	69192.6	80988.2
D4AC36	D4AC36	D4AC36_RAT	Eif3f	Eukaryotic translation initiation factor 3 subunit F	1	VIGLSSDLQQVGGASAR	VIGLSSDLQQVGGASAR	3	VIGLSSDLQQVGGASAR3	52836.2	39546.9	52012.6
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	VIGMHYFSPVDK	VIGMHYFSPVDK	2	VIGMHYFSPVDK2	6554.91	8111.6	7153.95
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	VIGMHYFSPVDK	VIGMHYFSPVDK	3	VIGMHYFSPVDK3	476176	402314	433603
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	VIGMSVYYPQVR	VIGMSVYYPQVR	2	VIGMSVYYPQVR2	29330.6	40040	39292
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	VIGMSVYYPQVR	VIGMSVYYPQVR	3	VIGMSVYYPQVR3	5644.92	11763.8	6167.16
P18266	P18266	GSK3B_RAT	Gsk3b	Glycogen synthase kinase-3 beta	1	VIGNGSFGVVYQAK	VIGNGSFGVVYQAK	2	VIGNGSFGVVYQAK2	2120.32	3680.71	2887.11
E9PU37	E9PU37	E9PU37_RAT	Zdhhc13	Palmitoyltransferase	1	VIGPEPTGFLLK	VIGPEPTGFLLK	2	VIGPEPTGFLLK2	52842.2	56011.3	63126.1
Q5I0H3	Q5I0H3	SUMO1_RAT	Sumo1	Small ubiquitin-related modifier 1	1	VIGQDSSEIHFK	VIGQDSSEIHFK	3	VIGQDSSEIHFK3	14852.1	17051.1	12215
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	VIGQSAVLPCVASGLPAPVIR	VIGQSAVLPC(UniMod:4)VASGLPAPVIR	3	VIGQSAVLPC(UniMod:4)VASGLPAPVIR3	49595.4	59590.1	
P04642	P04642;A0A8I6ASS6;P42123	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	VIGSGCNLDSAR	VIGSGC(UniMod:4)NLDSAR	2	VIGSGC(UniMod:4)NLDSAR2	2.05261e+06	1.9298e+06	2.11801e+06
A0A0G2JUU7	A0A0G2JUU7	A0A0G2JUU7_RAT	Tubgcp3	Gamma-tubulin complex component	1	VIGSNFAPTVERDEFLVAEK	VIGSNFAPTVERDEFLVAEK	3	VIGSNFAPTVERDEFLVAEK3	24604.8	24065.3	17544.9
D4AC36	D4AC36	D4AC36_RAT	Eif3f	Eukaryotic translation initiation factor 3 subunit F	1	VIGTLLGTVDK	VIGTLLGTVDK	2	VIGTLLGTVDK2	154720	126902	121654
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	VIGVCQLVNK	VIGVC(UniMod:4)QLVNK	2	VIGVC(UniMod:4)QLVNK2	1.43025e+06	1.62538e+06	1.53818e+06
Q07803	Q07803	EFGM_RAT	Gfm1	Elongation factor G, mitochondrial	1	VIGVLEPLAPEDYTK	VIGVLEPLAPEDYTK	2	VIGVLEPLAPEDYTK2	5825.86	7831.36	5595.86
B0BNC9	B0BNC9	QORL2_RAT		Quinone oxidoreductase-like protein 2	1	VIGVSNFHSMAEQCITDQK	VIGVSNFHSMAEQC(UniMod:4)ITDQK	3	VIGVSNFHSMAEQC(UniMod:4)ITDQK3	6108.89	17316	14264.3
F1LUI2	F1LUI2;D3ZME3	F1LUI2_RAT	AABR07013086.1	Glyceraldehyde 3-phosphate dehydrogenase catalytic domain-containing protein	0	VIHDNFGIMEGLMTTVHAITATQK	VIHDNFGIMEGLMTTVHAITATQK	4	VIHDNFGIMEGLMTTVHAITATQK4	32375.7	44576.2	21125.6
P04797	F1LUV3;M0R660;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	VIHDNFGIVEGLMTTVHAITATQK	VIHDNFGIVEGLMTTVHAITATQK	3	VIHDNFGIVEGLMTTVHAITATQK3	284833	280458	253556
P04797	F1LUV3;M0R660;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	VIHDNFGIVEGLMTTVHAITATQK	VIHDNFGIVEGLMTTVHAITATQK	4	VIHDNFGIVEGLMTTVHAITATQK4	16935.3	14696.8	3.19176e+06
A0A8I6AD02	A0A8I6AD02	A0A8I6AD02_RAT	ENSRNOG00000069655	Glyceraldehyde 3-phosphate dehydrogenase NAD(P) binding domain-containing protein	1	VIHDNFGIVEGLMTTVHAITSTQK	VIHDNFGIVEGLMTTVHAITSTQK	4	VIHDNFGIVEGLMTTVHAITSTQK4	155400	90957	86302.1
E9PTN6;E9PTV9	E9PTN6;E9PTV9	E9PTN6_RAT;E9PTV9_RAT	AABR07032392.1;LOC108352348	Glyceraldehyde-3-phosphate dehydrogenase	0	VIHDNFGIVEGLMTTVHVITATQK	VIHDNFGIVEGLMTTVHVITATQK	4	VIHDNFGIVEGLMTTVHVITATQK4		4813.9	
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	VIHDVCR	VIHDVC(UniMod:4)R	2	VIHDVC(UniMod:4)R2	76609.9		75230.7
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	VIHGNQIATNGVVHVIDR	VIHGNQIATNGVVHVIDR	4	VIHGNQIATNGVVHVIDR4	12646.9	19022.4	3674.16
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	VIHGVINSFVHVEQYK	VIHGVINSFVHVEQYK	3	VIHGVINSFVHVEQYK3		6246.86	4021.42
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	VIHGVINSFVHVEQYK	VIHGVINSFVHVEQYK	4	VIHGVINSFVHVEQYK4	2336.19	4160.02	4129.27
P03994	P03994	HPLN1_RAT	Hapln1	Hyaluronan and proteoglycan link protein 1	1	VIHIQAENGPR	VIHIQAENGPR	3	VIHIQAENGPR3	13626.6	9502.73	13259.4
Q5M7W6	Q5M7W6	F234A_RAT	Fam234a	Protein FAM234A	1	VIHLSEGSSDSDQAIR	VIHLSEGSSDSDQAIR	3	VIHLSEGSSDSDQAIR3	2975.37	6245.36	5304.19
P43244	P43244;A0A8I5ZWP0	MATR3_RAT	Matr3	Matrin-3	0	VIHLSNLPHSGYSDSAVLK	VIHLSNLPHSGYSDSAVLK	3	VIHLSNLPHSGYSDSAVLK3	3437.86		
P43244	P43244;A0A8I5ZWP0	MATR3_RAT	Matr3	Matrin-3	0	VIHLSNLPHSGYSDSAVLK	VIHLSNLPHSGYSDSAVLK	4	VIHLSNLPHSGYSDSAVLK4	16969.2	2354.67	
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	VIHLVER	VIHLVER	2	VIHLVER2	77310.1	73316.1	49536.4
P83888	P83888;A0A8I6A5N2	TBG1_RAT	Tubg1	Tubulin gamma-1 chain	0	VIHSILNSSYAK	VIHSILNSSYAK	3	VIHSILNSSYAK3	16154.4	17403	13298.7
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VIHVISPQFR	VIHVISPQFR	2	VIHVISPQFR2	12786.8	10071.8	4006.58
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VIHVISPQFR	VIHVISPQFR	3	VIHVISPQFR3	100317	160658	113102
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	VIHVLSDNELCVR	VIHVLSDNELC(UniMod:4)VR	3	VIHVLSDNELC(UniMod:4)VR3	19604.2	15387.5	20436.4
Q496Z0	Q496Z0	ELP2_RAT	Elp2	Elongator complex protein 2	1	VIHWELENNQVLK	VIHWELENNQVLK	3	VIHWELENNQVLK3	6245.04	5568.89	5851.05
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	VIIAHLPLLICCLQGLGR	VIIAHLPLLIC(UniMod:4)C(UniMod:4)LQGLGR	3	VIIAHLPLLIC(UniMod:4)C(UniMod:4)LQGLGR3	9284.04	14071.5	1353.81
Q5XIJ6	Q5XIJ6	BABA1_RAT	Babam1	BRISC and BRCA1-A complex member 1	1	VIICLDLSEEMSVPK	VIIC(UniMod:4)LDLSEEMSVPK	2	VIIC(UniMod:4)LDLSEEMSVPK2		6096.44	
Q499T5	Q499T5	Q499T5_RAT	Capn7	Calpain 7	1	VIIDDQLPVDHK	VIIDDQLPVDHK	3	VIIDDQLPVDHK3	8600.61	8759.74	6805.19
B0BMY7	A0A8I6AHG1;B0BMY7	B0BMY7_RAT	Twf2	Twinfilin actin-binding protein 2	0	VIIEDEQLVLGASQEPVGR	VIIEDEQLVLGASQEPVGR	3	VIIEDEQLVLGASQEPVGR3	16998	9877.51	12257
B2RYL4	B2RYL4	B2RYL4_RAT	Armc6	Armadillo repeat containing 6	1	VIIEGGGALAALQAMK	VIIEGGGALAALQAMK	2	VIIEGGGALAALQAMK2	5377.02	8555.37	8484.4
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	VIIHPDYR	VIIHPDYR	2	VIIHPDYR2	154815	100599	75130.1
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	VIIHPSWK	VIIHPSWK	1	VIIHPSWK1	41646.7	26732.1	16809.6
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	VIIHPSWK	VIIHPSWK	2	VIIHPSWK2	2.58919e+06	2.48138e+06	2.3134e+06
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	VIIHPSWKQEDDLNTR	VIIHPSWKQEDDLNTR	4	VIIHPSWKQEDDLNTR4	21886.6	40242.5	31549.6
P09527	P09527	RAB7A_RAT	Rab7a	Ras-related protein Rab-7a	1	VIILGDSGVGK	VIILGDSGVGK	2	VIILGDSGVGK2	1.54809e+06	1.57644e+06	1.66224e+06
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	VIILSLDR	VIILSLDR	2	VIILSLDR2	160008	168086	147123
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	VIILSLDRSDEDKEK	VIILSLDRSDEDKEK	3	VIILSLDRSDEDKEK3	29561	24094.2	19284.3
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	VIILSLDRSDEDKEK	VIILSLDRSDEDKEK	4	VIILSLDRSDEDKEK4	45225.3	77764.7	57541.6
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	VIIMILNGEK	VIIMILNGEK	2	VIIMILNGEK2	7289.94	4590.32	
D3ZR63	D3ZR63	D3ZR63_RAT	Gfod1	Glucose-fructose oxidoreductase domain containing 1	1	VIIPLLKDEGFAVK	VIIPLLKDEGFAVK	3	VIIPLLKDEGFAVK3	12059.9	5150.36	6664.92
Q00495	Q00495	CSF1R_RAT	Csf1r	Macrophage colony-stimulating factor 1 receptor	1	VIIQSQLPIGTLK	VIIQSQLPIGTLK	2	VIIQSQLPIGTLK2	45613.7	49549.6	35493.4
P04797	F1LUV3;M0R660;M0R7H7;D3ZGY4;P04797;A0A8I6AAX6	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	VIISAPSADAPMFVMGVNHEK	VIISAPSADAPMFVMGVNHEK	3	VIISAPSADAPMFVMGVNHEK3	2.0792e+06	1.76154e+06	1.80061e+06
P04797	F1LUV3;M0R660;M0R7H7;D3ZGY4;P04797;A0A8I6AAX6	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	VIISAPSADAPMFVMGVNHEK	VIISAPSADAPMFVMGVNHEK	4	VIISAPSADAPMFVMGVNHEK4	6387.35	4549.69	4941.51
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	VIISGEEK	VIISGEEK	2	VIISGEEK2	332682	425031	427550
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	VIISVLDENDNAPR	VIISVLDENDNAPR	2	VIISVLDENDNAPR2	5159.4	10854.5	4770.38
Q7TP59	Q7TP59	Q7TP59_RAT	Dipk2a	Ab2-095	1	VIIVDAENVLVADK	VIIVDAENVLVADK	2	VIIVDAENVLVADK2	3132.67		3995.23
Q7TP59	Q7TP59	Q7TP59_RAT	Dipk2a	Ab2-095	1	VIIVDAENVLVADKR	VIIVDAENVLVADKR	3	VIIVDAENVLVADKR3	12068.5	4435.99	14906.5
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	VIIYNPVGR	VIIYNPVGR	2	VIIYNPVGR2	49620.7	33133.5	53799.6
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	VILASDDGCIR	VILASDDGC(UniMod:4)IR	2	VILASDDGC(UniMod:4)IR2	30016.2	42175.9	38573
P61621	A0A8I6AA70;P61621	S61A1_RAT	Sec61a1	Protein transport protein Sec61 subunit alpha isoform 1	0	VILASNR	VILASNR	2	VILASNR2	97093.6	62586.1	91079.1
P0CH38	P0CH38	FBSP1_RAT	Fbxo45	F-box/SPRY domain-containing protein 1 (Fragment)	1	VILDMEDK	VILDMEDK	2	VILDMEDK2	11760.1	13411.8	15472.1
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	VILDNLQAK	VILDNLQAK	2	VILDNLQAK2	29159.6	30687.4	45922.9
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	VILEDVAMLHIKPDQFTYTSDHFETIMK	VILEDVAMLHIKPDQFTYTSDHFETIMK	4	VILEDVAMLHIKPDQFTYTSDHFETIMK4	4915.71	9361.24	4401.02
O08774	O08774	RGS12_RAT	Rgs12	Regulator of G-protein signaling 12	1	VILEERDPSR	VILEERDPSR	3	VILEERDPSR3	27019.6	24366	24568.3
Q6IFV3	Q6IFV3	K1C15_RAT	Krt15	Keratin, type I cytoskeletal 15	1	VILEIDNAR	VILEIDNAR	2	VILEIDNAR2	2614.24	29230.1	
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	VILEPLIGDLPIVGAVSMFFIK	VILEPLIGDLPIVGAVSMFFIK	3	VILEPLIGDLPIVGAVSMFFIK3	1777.1	2762.64	
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	VILESLLSQYSGK	VILESLLSQYSGK	2	VILESLLSQYSGK2	3165.41	5823.13	
A0A8I6A202	A0A8I6A202	A0A8I6A202_RAT	Pusl1	tRNA pseudouridine synthase	1	VILESQDPLGK	VILESQDPLGK	2	VILESQDPLGK2	3464.4	4058.02	
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	VILFGQR	VILFGQR	2	VILFGQR2	10721.7	10630.3	16974.4
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	VILFNPLDACR	VILFNPLDAC(UniMod:4)R	2	VILFNPLDAC(UniMod:4)R2	101178	98803.7	99150.4
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	VILGAHEER	VILGAHEER	2	VILGAHEER2	302905	198537	186450
P28077	P28077	PSB9_RAT	Psmb9	Proteasome subunit beta type-9	1	VILGDELPK	VILGDELPK	2	VILGDELPK2	2.01717e+06	1.9889e+06	2.22322e+06
B0BNB9	B0BNB9	B0BNB9_RAT	Htra2	HtrA serine peptidase 2	1	VILGSPAHR	VILGSPAHR	2	VILGSPAHR2	19682.1	15830.1	29055.9
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	VILGTLNLNTEK	VILGTLNLNTEK	2	VILGTLNLNTEK2	70158.7	67273.9	63944.2
P34058	P82995;P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	VILHLKEDQTEYLEER	VILHLKEDQTEYLEER	3	VILHLKEDQTEYLEER3	5780.45	3428.47	4288.89
P34058	P82995;P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	VILHLKEDQTEYLEER	VILHLKEDQTEYLEER	4	VILHLKEDQTEYLEER4	47651.9	36370.1	39932.9
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	VILIPVGIGPHANLK	VILIPVGIGPHANLK	2	VILIPVGIGPHANLK2	622394	833059	629626
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	VILIPVGIGPHANLK	VILIPVGIGPHANLK	3	VILIPVGIGPHANLK3	4.90219e+06	5.65449e+06	5.38079e+06
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	VILIPVGIGPHANLK	VILIPVGIGPHANLK	4	VILIPVGIGPHANLK4	13055.3	17707.6	18787.1
Q711G3	Q711G3	IAH1_RAT	Iah1	Isoamyl acetate-hydrolyzing esterase 1 homolog	1	VILITPPPLCEAAWEK	VILITPPPLC(UniMod:4)EAAWEK	2	VILITPPPLC(UniMod:4)EAAWEK2	19369.2	20756.4	20642.8
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	VILLDVAR	VILLDVAR	2	VILLDVAR2	117407	126353	123606
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	VILLLTASQEPQR	VILLLTASQEPQR	2	VILLLTASQEPQR2	1.52214e+06	1.50047e+06	1.37436e+06
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	VILLLTASQEPQR	VILLLTASQEPQR	3	VILLLTASQEPQR3	482064	554420	537832
Q68G38	Q68G38	TOR1A_RAT	Tor1a	Torsin-1A	1	VILNAVSGFLSNPKPK	VILNAVSGFLSNPKPK	3	VILNAVSGFLSNPKPK3	22912.9	25234.6	14524
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	VILNEITHVQDLFLR	VILNEITHVQDLFLR	3	VILNEITHVQDLFLR3	22099.4	22361.5	26182.1
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	VILNPINTNLSK	VILNPINTNLSK	2	VILNPINTNLSK2	41787.7	52229.1	50456.3
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	VILPDDVR	VILPDDVR	2	VILPDDVR2	57762.8	58682.3	49646.8
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	VILPDLAVLR	VILPDLAVLR	2	VILPDLAVLR2	30789.6	23994.2	31271.4
A0A0G2JST1	A0A0G2JST1	A0A0G2JST1_RAT	Adgrg6	Adhesion G protein-coupled receptor G6	1	VILPQTLDAYQVSVAK	VILPQTLDAYQVSVAK	2	VILPQTLDAYQVSVAK2	32962.9	24402	34634.3
D3ZK09	D3ZK09	D3ZK09_RAT	Scyl3	SCY1 like pseudokinase 3	1	VILPQVLLGLR	VILPQVLLGLR	2	VILPQVLLGLR2	4855.92	3500.68	4327.19
P16446	P16446	PIPNA_RAT	Pitpna	Phosphatidylinositol transfer protein alpha isoform	1	VILPVSVDEYQVGQLYSVAEASK	VILPVSVDEYQVGQLYSVAEASK	3	VILPVSVDEYQVGQLYSVAEASK3	5999.66	2933.94	3870.63
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	VILQDFTGVPAVVDFAAMR	VILQDFTGVPAVVDFAAMR	3	VILQDFTGVPAVVDFAAMR3	3635.44	5089.69	
A0A8I6A3Q1;A0A8I6AT35	A0A8I6A3Q1;A0A8I6AT35	A0A8I6A3Q1_RAT;A0A8I6AT35_RAT	ENSRNOG00000067007;LOC679539	UBC core domain-containing protein	0	VILQELR	VILQELR	2	VILQELR2	105005	89427.4	95458.4
O08984	O08984	LBR_RAT	Lbr	Delta(14)-sterol reductase LBR	1	VILSTEDSYIATQYSLRPR	VILSTEDSYIATQYSLRPR	3	VILSTEDSYIATQYSLRPR3	68841.8	65373.6	78650.8
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	VILTAEVSGGSR	VILTAEVSGGSR	2	VILTAEVSGGSR2	65733.4	76073.6	72086.9
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	VILTNIQNR	VILTNIQNR	2	VILTNIQNR2	61794.6	76624.2	56363.4
D3ZVN7	D3ZVN7	D3ZVN7_RAT	Ppox	Amine oxidase	1	VILVEGSK	VILVEGSK	2	VILVEGSK2		26190.3	
P62198	P62198;P62193;Q63570	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	0	VIMATNR	VIMATNR	2	VIMATNR2	1.03807e+06	1.08012e+06	897023
P11507	Q64578;P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	0	VIMITGDNK	VIMITGDNK	2	VIMITGDNK2	708038	703891	719385
Q9ESC2	Q9ESC2	TNMD_RAT	Tnmd	Tenomodulin	1	VIMPCNWWVAR	VIMPC(UniMod:4)NWWVAR	2	VIMPC(UniMod:4)NWWVAR2	26050.8	29312.3	38317.1
P63322	P63322;P36860	RALA_RAT	Rala	Ras-related protein Ral-A	0	VIMVGSGGVGK	VIMVGSGGVGK	2	VIMVGSGGVGK2	474406	398566	491661
P06685	P54708;P09626;Q64541;P06687;P06685;P06686	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	0	VIMVTGDHPITAK	VIMVTGDHPITAK	2	VIMVTGDHPITAK2	12969.8	6716.27	8489.01
P06685	P54708;P09626;Q64541;P06687;P06685;P06686	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	0	VIMVTGDHPITAK	VIMVTGDHPITAK	3	VIMVTGDHPITAK3	340987	317738	351755
P02091	P11517;P02091	HBB1_RAT	Hbb	Hemoglobin subunit beta-1	0	VINAFNDGLK	VINAFNDGLK	2	VINAFNDGLK2	2.04707e+06	2.3023e+06	2.28722e+06
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	VINDGLFYYEQDLWTEK	VINDGLFYYEQDLWTEK	3	VINDGLFYYEQDLWTEK3	1967.73	4860.88	5015.06
B2GV52	B2GV52	BL1S5_RAT	Bloc1s5	Biogenesis of lysosome-related organelles complex 1 subunit 5	1	VINDHLTASEK	VINDHLTASEK	3	VINDHLTASEK3	36091.4	23265.9	31186.6
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VINDITFK	VINDITFK	1	VINDITFK1	8379.29	5183.33	3327.73
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VINDITFK	VINDITFK	2	VINDITFK2	1.27177e+06	1.36016e+06	1.31823e+06
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	VINDKHDDVMAK	VINDKHDDVMAK	2	VINDKHDDVMAK2	1899.31		1474.57
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	VINDKHDDVMAK	VINDKHDDVMAK	3	VINDKHDDVMAK3	38847.7	31549.7	50003.2
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	VINDYVEK	VINDYVEK	1	VINDYVEK1	49822.2	50548	39264.6
P17475	P17475	A1AT_RAT	Serpina1	Alpha-1-antiproteinase	1	VINDYVEK	VINDYVEK	2	VINDYVEK2	6.09915e+06	6.10414e+06	6.04694e+06
Q6P6Q9	Q6P6Q9	MICU1_RAT	Micu1	Calcium uptake protein 1, mitochondrial	1	VINEPGETEVFMTPQDFVR	VINEPGETEVFMTPQDFVR	3	VINEPGETEVFMTPQDFVR3	42021.4	30302.2	32893.3
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	VINEPTAAALAYGLDK	VINEPTAAALAYGLDK	2	VINEPTAAALAYGLDK2	203879	194604	204564
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	VINEPTAAALAYGLDK	VINEPTAAALAYGLDK	3	VINEPTAAALAYGLDK3	29075.7	21580.3	26151
O35162	O35162	HSP13_RAT	Hspa13	Heat shock 70 kDa protein 13	1	VINEPTAAAMAYGLHK	VINEPTAAAMAYGLHK	3	VINEPTAAAMAYGLHK3	10940.4	10777.3	9508.46
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	VINKPISEHR	VINKPISEHR	2	VINKPISEHR2	5451.77		2178.92
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	VINLGKPLK	VINLGKPLK	2	VINLGKPLK2	84320	69372.6	69717.3
A0A8I6AMS6	A0A8I6AMS6	A0A8I6AMS6_RAT	Rangap1	RAN GTPase activating protein 1	1	VINLNDNTFTEK	VINLNDNTFTEK	2	VINLNDNTFTEK2	8407.58	18963.7	12399.5
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	VINNILEDR	VINNILEDR	2	VINNILEDR2	61120.1	45333.6	55138.4
P86182	P86182	CCD22_RAT	Ccdc22	Coiled-coil domain-containing protein 22	1	VINPDVGSGLSHLLPPAMSAR	VINPDVGSGLSHLLPPAMSAR	3	VINPDVGSGLSHLLPPAMSAR3	12101.7	12073.9	20007.6
Q63556	Q63556	SPA3M_RAT	Serpina3m	Serine protease inhibitor A3M (Fragment)	1	VINPVGA	VINPVGA	1	VINPVGA1	369124	312432	302481
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	VINQILTEMDGMSTK	VINQILTEMDGMSTK	2	VINQILTEMDGMSTK2	830000	847229	670362
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	VINQILTEMDGMSTK	VINQILTEMDGMSTK	3	VINQILTEMDGMSTK3	137919	104934	129861
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	VINQILTEMDGMSTKK	VINQILTEMDGMSTKK	3	VINQILTEMDGMSTKK3	24828.3	31160.4	34643.6
Q3KR59	Q3KR59	UBP10_RAT	Usp10	Ubiquitin carboxyl-terminal hydrolase 10	1	VINQYQVVRPSADR	VINQYQVVRPSADR	3	VINQYQVVRPSADR3	54403.2	45702.9	45228.5
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	VINSVDIK	VINSVDIK	1	VINSVDIK1	5475	2826.93	2972.23
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	VINSVDIK	VINSVDIK	2	VINSVDIK2	580477	598247	665573
Q8R3Z7	Q8R3Z7	Q8R3Z7_RAT	Ehd4	EH-domain containing 4	1	VINTPEVLR	VINTPEVLR	2	VINTPEVLR2	91742.8	87732	80325.7
O70351	O70351	HCD2_RAT	Hsd17b10	3-hydroxyacyl-CoA dehydrogenase type-2	1	VINVNLIGTFNVIR	VINVNLIGTFNVIR	2	VINVNLIGTFNVIR2	26659.1	26951.6	23020.5
O70351	O70351	HCD2_RAT	Hsd17b10	3-hydroxyacyl-CoA dehydrogenase type-2	1	VINVNLIGTFNVIR	VINVNLIGTFNVIR	3	VINVNLIGTFNVIR3	2162.75		2025.8
Q8VD48	Q8VD48	DHRS9_RAT	Dhrs9	Dehydrogenase/reductase SDR family member 9	1	VINVSSIGGR	VINVSSIGGR	2	VINVSSIGGR2	9316.91	9290.03	6929.64
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	VIPAADLSEQISTAGTEASGTGNMK	VIPAADLSEQISTAGTEASGTGNMK	3	VIPAADLSEQISTAGTEASGTGNMK3	10232.7	17165.9	7279.41
P53534	P53534	PYGB_RAT	Pygb	Glycogen phosphorylase, brain form (Fragment)	1	VIPAADLSQQISTAGTEASGTGNMK	VIPAADLSQQISTAGTEASGTGNMK	3	VIPAADLSQQISTAGTEASGTGNMK3	2943.47	5246.37	4667.07
P29117	P29117	PPIF_RAT	Ppif	Peptidyl-prolyl cis-trans isomerase F, mitochondrial	1	VIPAFMCQAGDFTNHNGTGGK	VIPAFMC(UniMod:4)QAGDFTNHNGTGGK	3	VIPAFMC(UniMod:4)QAGDFTNHNGTGGK3	362306	371736	376341
Q920E1	Q920E1	PAR3_RAT	F2rl2	Proteinase-activated receptor 3	1	VIPAIYILVFVIGVPANIVTLWK	VIPAIYILVFVIGVPANIVTLWK	3	VIPAIYILVFVIGVPANIVTLWK3	4442.65	3463.18	1508.42
P24594	P24594	IBP5_RAT	Igfbp5	Insulin-like growth factor-binding protein 5	1	VIPAPEMR	VIPAPEMR	2	VIPAPEMR2	110472	98987.5	110073
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	VIPATDLSEQISTAGTEASGTGNMK	VIPATDLSEQISTAGTEASGTGNMK	3	VIPATDLSEQISTAGTEASGTGNMK3	44870.8	47249.7	53014.6
A0A8I6AAA9	A0A8I6AAA9	A0A8I6AAA9_RAT	Lrch1	Leucine rich repeats and calponin homology domain containing 1	1	VIPEAIVNLQMLTHLNLSR	VIPEAIVNLQMLTHLNLSR	3	VIPEAIVNLQMLTHLNLSR3	8261.36		
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	VIPEDGPAAQNPDK	VIPEDGPAAQNPDK	2	VIPEDGPAAQNPDK2	359225	377114	367759
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	VIPEDGPAAQNPDKVK	VIPEDGPAAQNPDKVK	3	VIPEDGPAAQNPDKVK3	51517.9	49139.2	43965.7
Q6AXR4	Q6AXR4	HEXB_RAT	Hexb	Beta-hexosaminidase subunit beta	1	VIPEFDSPGHTQSWGK	VIPEFDSPGHTQSWGK	3	VIPEFDSPGHTQSWGK3	13959.7	21229.4	15068.1
P04797	Q498M9;F1M269;F1LUV3;F1LUI2;Q9ESV6;M0R660;D3ZEN2;D3ZME3;A0A0G2JWC0;M0R7H7;A0A0G2K8S2;D3ZQT0;E9PTV9;A0A8I5ZWK4;F1M2N4;A0A8I6B4A1;P04797;F1M4G6	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	VIPELNGK	VIPELNGK	1	VIPELNGK1	46358.1	53842.3	38595.4
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	VIPGAAEGASDLAQLLAELGGVVR	VIPGAAEGASDLAQLLAELGGVVR	3	VIPGAAEGASDLAQLLAELGGVVR3	6468.49		
Q5I0H9	Q5I0H9	PDIA5_RAT	Pdia5	Protein disulfide-isomerase A5	1	VIPHFTATADAFK	VIPHFTATADAFK	3	VIPHFTATADAFK3	14929.4	12308.9	9846.12
A0A0G2K1A4	A0A0G2K1A4	A0A0G2K1A4_RAT	Evi5l	Ecotropic viral integration site 5-like	1	VIPHQFDSCPDK	VIPHQFDSC(UniMod:4)PDK	3	VIPHQFDSC(UniMod:4)PDK3	18461.2	21895.3	11081.6
Q2HWF0	Q2HWF0	FBP1L_RAT	Fnbp1l	Formin-binding protein 1-like	1	VIPIISK	VIPIISK	1	VIPIISK1	7467.67	6478.53	6432.51
D3ZGB8	D3ZGB8	D3ZGB8_RAT	Cilp	Cartilage intermediate layer protein	1	VIPQGSCHR	VIPQGSC(UniMod:4)HR	2	VIPQGSC(UniMod:4)HR2			40422.9
D3ZYB4	D3ZYB4	D3ZYB4_RAT	Lpin2	phosphatidate phosphatase	1	VIPSEDSLIR	VIPSEDSLIR	2	VIPSEDSLIR2	30017.8	31072.2	20220.6
A0A8I5ZZZ6	A0A8I5ZZZ6	A0A8I5ZZZ6_RAT	Riok3	Serine/threonine-protein kinase RIO3	1	VIPTECAIK	VIPTEC(UniMod:4)AIK	2	VIPTEC(UniMod:4)AIK2	55083.8	83083.3	91083.8
Q8K581	Q8K581	TXND9_RAT	Txndc9	Thioredoxin domain-containing protein 9	1	VIPTLALLR	VIPTLALLR	2	VIPTLALLR2	58767.7	71313.1	74695.3
P08721	P08721	OSTP_RAT	Spp1	Osteopontin	1	VIPVAQR	VIPVAQR	2	VIPVAQR2	1.98488e+06	2.56014e+06	1.85706e+06
D3ZK09	D3ZK09	D3ZK09_RAT	Scyl3	SCY1 like pseudokinase 3	1	VIPVLLQLFEVHEEHVR	VIPVLLQLFEVHEEHVR	4	VIPVLLQLFEVHEEHVR4	3457.64		
F7FLA1	F7FLA1	F7FLA1_RAT	Slc35b2	Solute carrier family 35 member B2	1	VIPVMMMGK	VIPVMMMGK	2	VIPVMMMGK2	54553.3	51839.8	50293.4
G3V8Z6	G3V8Z6	G3V8Z6_RAT	Krit1	KRIT1, ankyrin repeat containing	1	VIPVYVGVNIK	VIPVYVGVNIK	2	VIPVYVGVNIK2	9530.31	11213.6	14679.1
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	VIQAMNHR	VIQAMNHR	2	VIQAMNHR2	4512.77	6728.34	
Q923S8	Q923S8	PANK4_RAT	Pank4	4'-phosphopantetheine phosphatase	1	VIQATGGGAYK	VIQATGGGAYK	2	VIQATGGGAYK2	9550.58	9105.32	4511.19
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	VIQCFAETGQVQK	VIQC(UniMod:4)FAETGQVQK	2	VIQC(UniMod:4)FAETGQVQK2	311554	314367	296118
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	VIQCFAETGQVQK	VIQC(UniMod:4)FAETGQVQK	3	VIQC(UniMod:4)FAETGQVQK3	39984.3	61509.5	72960.8
A0A0G2K516	A0A0G2K516	A0A0G2K516_RAT	Stx11	Syntaxin 11	1	VIQDIQDENQLLLIDVR	VIQDIQDENQLLLIDVR	3	VIQDIQDENQLLLIDVR3	98354.6	110222	105266
A0A0G2K516	A0A0G2K516	A0A0G2K516_RAT	Stx11	Syntaxin 11	1	VIQDIQDENQLLLIDVRR	VIQDIQDENQLLLIDVRR	3	VIQDIQDENQLLLIDVRR3		5366.57	6366.75
Q5XI81	Q5XI81;A0A8J8YNR6	FXR1_RAT	Fxr1	RNA-binding protein FXR1	0	VIQEIVDK	VIQEIVDK	2	VIQEIVDK2	57507.6	52627.2	40524.8
A0A8I6G251	A0A8I6G251	A0A8I6G251_RAT	Tnpo3	Transportin 3	1	VIQEIWPVLSETLNK	VIQEIWPVLSETLNK	2	VIQEIWPVLSETLNK2	26220.3	29734.3	21842.1
A0A8I5ZKS4	A0A8I5ZKS4	A0A8I5ZKS4_RAT	Hycc1	Family with sequence similarity 126, member A	1	VIQEPQSELLEPVCHQLFEFYR	VIQEPQSELLEPVC(UniMod:4)HQLFEFYR	3	VIQEPQSELLEPVC(UniMod:4)HQLFEFYR3	29980.6	25959.3	23503.7
P35053	P35053	GPC1_RAT	Gpc1	Glypican-1	1	VIQGCGNPK	VIQGC(UniMod:4)GNPK	2	VIQGC(UniMod:4)GNPK2			7470.1
A0A8I6AHK0	A0A8I6AHK0	A0A8I6AHK0_RAT	Postn	Periostin	1	VIQGSLQPIIK	VIQGSLQPIIK	2	VIQGSLQPIIK2	11491.8	8628.96	8813.9
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	VIQHNALEDR	VIQHNALEDR	2	VIQHNALEDR2	18310.2	17159.5	14390.1
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	VIQHNALEDR	VIQHNALEDR	3	VIQHNALEDR3	90058.1	86642.3	87980.3
Q5BJS0	Q5BJS0	DHX30_RAT	Dhx30	ATP-dependent RNA helicase DHX30	1	VIQIATSSSTAK	VIQIATSSSTAK	2	VIQIATSSSTAK2	1434.02	1472.27	3423.11
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	VIQIVINR	VIQIVINR	2	VIQIVINR2	3136.64	3888.72	2691.13
Q68FP2	Q68FP2	PON3_RAT	Pon3	Serum paraoxonase/lactonase 3	1	VIQLGTLVDNLTVDPATGDILAGCHPNPMK	VIQLGTLVDNLTVDPATGDILAGC(UniMod:4)HPNPMK	4	VIQLGTLVDNLTVDPATGDILAGC(UniMod:4)HPNPMK4	8600.67	4367.37	3647.11
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	VIQLSDKEQSNWTK	VIQLSDKEQSNWTK	3	VIQLSDKEQSNWTK3	15121.2	21667	24132.4
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	VIQMVPEFAANPK	VIQMVPEFAANPK	2	VIQMVPEFAANPK2	19971.2	17774.9	22567.7
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	VIQMVPEFAANPK	VIQMVPEFAANPK	3	VIQMVPEFAANPK3			4226.46
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	VIQNHLNYPFSVVSYADHFYHTDWR	VIQNHLNYPFSVVSYADHFYHTDWR	4	VIQNHLNYPFSVVSYADHFYHTDWR4	8311.9	9144.14	11854.4
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	VIQQFPSK	VIQQFPSK	2	VIQQFPSK2	51777.7	66900.6	44194.1
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	VIQQSLEQEEAEHK	VIQQSLEQEEAEHK	2	VIQQSLEQEEAEHK2	1954.97	3809.5	
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	VIQQSLEQEEAEHK	VIQQSLEQEEAEHK	3	VIQQSLEQEEAEHK3	32961.7	37484.8	44252
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	VIQSADSK	VIQSADSK	2	VIQSADSK2			31774.2
M0R6S5	M0R6S5	M0R6S5_RAT	Chsy3	Hexosyltransferase	1	VIQSGLRPFR	VIQSGLRPFR	3	VIQSGLRPFR3	23763.3	27379.1	27706.3
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	VIQSLEDTAK	VIQSLEDTAK	2	VIQSLEDTAK2	58977.4	62035.2	58148.7
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	VIQSLEDTAKR	VIQSLEDTAKR	3	VIQSLEDTAKR3	7909.12	10386.7	12073.6
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	VIQSVANYAK	VIQSVANYAK	2	VIQSVANYAK2	88382.6	96772.1	88122.9
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	VIQTLQAPPDVAPTSLTVR	VIQTLQAPPDVAPTSLTVR	3	VIQTLQAPPDVAPTSLTVR3	5515.65	15205.7	9523.59
Q63488	Q63488;Q9JJP0	S20A2_RAT	Slc20a2	Sodium-dependent phosphate transporter 2	0	VIQTMGK	VIQTMGK	2	VIQTMGK2	12071.7	12430.5	16545.1
Q6PEC4	Q6PEC4	SKP1_RAT	Skp1	S-phase kinase-associated protein 1	1	VIQWCTHHK	VIQWC(UniMod:4)THHK	2	VIQWC(UniMod:4)THHK2	6312.05		4087.3
Q6PEC4	Q6PEC4	SKP1_RAT	Skp1	S-phase kinase-associated protein 1	1	VIQWCTHHK	VIQWC(UniMod:4)THHK	3	VIQWC(UniMod:4)THHK3	31746.4	20518.6	15038.1
Q62812	Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	VIQYLAHVASSHK	VIQYLAHVASSHK	2	VIQYLAHVASSHK2	296369	246435	225323
Q62812	Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	VIQYLAHVASSHK	VIQYLAHVASSHK	3	VIQYLAHVASSHK3	254189	241995	237473
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VIQYLAHVASSHKSK	VIQYLAHVASSHKSK	4	VIQYLAHVASSHKSK4	3092.82	4693.51	5200.68
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	VIRPLDQPSSFDATPYIK	VIRPLDQPSSFDATPYIK	3	VIRPLDQPSSFDATPYIK3	283375	346624	293277
Q5XI60	Q5XI60	REEP6_RAT	Reep6	Receptor expression-enhancing protein 6	1	VIRPLFLK	VIRPLFLK	2	VIRPLFLK2	41562	42856.8	28668
Q923M1	Q923M1	MSRA_RAT	Msra	Mitochondrial peptide methionine sulfoxide reductase	1	VISAEEALPGR	VISAEEALPGR	2	VISAEEALPGR2	7227.2	9023.08	9315.07
P59622	P59622	SLAP1_RAT	Sla	Src-like-adapter	1	VISDEGGWWK	VISDEGGWWK	2	VISDEGGWWK2	8367.59	16316.2	16297.6
P02401	P02401;D4A4D5;D3ZN03	RLA2_RAT	Rplp2	Large ribosomal subunit protein P2	0	VISELNGK	VISELNGK	1	VISELNGK1	1119.8	1376.51	2439.61
P02401	P02401;D4A4D5;D3ZN03	RLA2_RAT	Rplp2	Large ribosomal subunit protein P2	0	VISELNGK	VISELNGK	2	VISELNGK2	319013	392526	351451
O88959	O88959	INHBE_RAT	Inhbe	Inhibin beta E chain	1	VISFATSIDK	VISFATSIDK	2	VISFATSIDK2	46575.5	52160.5	47758
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	VISFEEQVASIR	VISFEEQVASIR	2	VISFEEQVASIR2	48455.1	48762.4	48881
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	VISFEEQVASIR	VISFEEQVASIR	3	VISFEEQVASIR3	12821.3	15099	8636.58
O08775	O08775	VGFR2_RAT	Kdr	Vascular endothelial growth factor receptor 2	1	VISFHVIR	VISFHVIR	2	VISFHVIR2	10989.7		9280.91
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	VISFIENTSTPVDR	VISFIENTSTPVDR	2	VISFIENTSTPVDR2	33531.4	44906.4	37960.8
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	VISFIENTSTPVDR	VISFIENTSTPVDR	3	VISFIENTSTPVDR3	11487.3	6211.3	5373.62
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	VISGQFLSDR	VISGQFLSDR	2	VISGQFLSDR2	65611.9	71577.9	58705.1
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	VISGQFLSDRK	VISGQFLSDRK	3	VISGQFLSDRK3	68133.1	76125.6	48395
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VISGVLQLGNIVFK	VISGVLQLGNIVFK	2	VISGVLQLGNIVFK2	5.52411e+06	6.99564e+06	6.35827e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VISGVLQLGNIVFK	VISGVLQLGNIVFK	3	VISGVLQLGNIVFK3	40088.7	60278.8	47351.8
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VISGVLQLGNIVFKK	VISGVLQLGNIVFKK	2	VISGVLQLGNIVFKK2	45855.8	55281.2	50952.6
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VISGVLQLGNIVFKK	VISGVLQLGNIVFKK	3	VISGVLQLGNIVFKK3	1.80822e+06	982499	1.39781e+06
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	VISHLLQLVDEK	VISHLLQLVDEK	2	VISHLLQLVDEK2	11531.3	4899.58	5777.49
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	VISHLLQLVDEK	VISHLLQLVDEK	3	VISHLLQLVDEK3	5796.34	5659.61	2779.61
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	VISHLLQLVDEKESPENTSENEDYMK	VISHLLQLVDEKESPENTSENEDYMK	4	VISHLLQLVDEKESPENTSENEDYMK4	7431.4	7154.24	6757.29
P70483	P70483	STRN_RAT	Strn	Striatin	1	VISHPTLPISITAHEDR	VISHPTLPISITAHEDR	2	VISHPTLPISITAHEDR2	3930.16		3372.74
P70483	P70483	STRN_RAT	Strn	Striatin	1	VISHPTLPISITAHEDR	VISHPTLPISITAHEDR	3	VISHPTLPISITAHEDR3	43460.5	30201.9	31155.2
P70483	P70483	STRN_RAT	Strn	Striatin	1	VISHPTLPISITAHEDR	VISHPTLPISITAHEDR	4	VISHPTLPISITAHEDR4	89608.2	101247	95952.9
A0A8I6AHG2	A0A8I6AHG2	A0A8I6AHG2_RAT	St6galnac4	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4	1	VISHTSVPLLLR	VISHTSVPLLLR	3	VISHTSVPLLLR3	11429	5582.33	7933.56
Q920R3	Q920R3	FADS1_RAT	Fads1	Acyl-CoA (8-3)-desaturase	1	VISHYAGQDATDPFVAFHINK	VISHYAGQDATDPFVAFHINK	3	VISHYAGQDATDPFVAFHINK3	4992.34	2178.86	
Q920R3	Q920R3	FADS1_RAT	Fads1	Acyl-CoA (8-3)-desaturase	1	VISHYAGQDATDPFVAFHINK	VISHYAGQDATDPFVAFHINK	4	VISHYAGQDATDPFVAFHINK4	17042	2979.29	
O88656	O88656	ARC1B_RAT	Arpc1b	Actin-related protein 2/3 complex subunit 1B	1	VISICYFEQENDWWVCK	VISIC(UniMod:4)YFEQENDWWVC(UniMod:4)K	3	VISIC(UniMod:4)YFEQENDWWVC(UniMod:4)K3	21915.2	22891.7	11578.3
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	VISKPLLGSTEPSDTVDSTR	VISKPLLGSTEPSDTVDSTR	3	VISKPLLGSTEPSDTVDSTR3	147977	141627	153844
Q6EV70	Q6EV70	OFUT1_RAT	Pofut1	GDP-fucose protein O-fucosyltransferase 1	1	VISLEDFMEK	VISLEDFMEK	2	VISLEDFMEK2	5660.08		
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	VISLPTQNCAYK	VISLPTQNC(UniMod:4)AYK	2	VISLPTQNC(UniMod:4)AYK2	93364.1	91575.1	100879
P07632	P07632	SODC_RAT	Sod1	Superoxide dismutase [Cu-Zn]	1	VISLSGEHSIIGR	VISLSGEHSIIGR	3	VISLSGEHSIIGR3	58480.7	71786.3	52759.1
P01830	P01830	THY1_RAT	Thy1	Thy-1 membrane glycoprotein	1	VISLTACLVNQNLR	VISLTAC(UniMod:4)LVNQNLR	2	VISLTAC(UniMod:4)LVNQNLR2	53860.1	49151.9	43877.2
P01830	P01830	THY1_RAT	Thy1	Thy-1 membrane glycoprotein	1	VISLTACLVNQNLR	VISLTAC(UniMod:4)LVNQNLR	3	VISLTAC(UniMod:4)LVNQNLR3	14881.7	11084.1	14945.5
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	VISNEFNSR	VISNEFNSR	2	VISNEFNSR2	49919.4	48917.8	55893
A0A8I6A0P7	A0A8I6A0P7	A0A8I6A0P7_RAT	Gsap	Gamma-secretase activating protein	1	VISNMEMK	VISNMEMK	2	VISNMEMK2	70781.2	81224.2	74679.9
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	VISPSEDR	VISPSEDR	2	VISPSEDR2	1.42106e+06	1.29895e+06	1.31422e+06
Q9JMB3	Q9JMB3	Q9JMB3_RAT	Epb41l3	Erythrocyte membrane protein band 4.1-like 3	1	VISQTNLITTVTPEK	VISQTNLITTVTPEK	2	VISQTNLITTVTPEK2	4965.75	3198.02	1592.41
P68511	P35213;A0A8I6A3D6;A0A8I6AJ05;P68255;P61983;P68511	1433F_RAT	Ywhah	14-3-3 protein eta	0	VISSIEQK	VISSIEQK	1	VISSIEQK1	85664.9	63952.4	80718.6
F7FMS0	F7FMS0	F7FMS0_RAT	Mst1	Macrophage stimulating 1	1	VISSQECNVK	VISSQEC(UniMod:4)NVK	2	VISSQEC(UniMod:4)NVK2	19048.3	21211	26800.2
Q9ESC1	Q9ESC1	AGRL4_RAT	Adgrl4	Adhesion G protein-coupled receptor L4	1	VISSVISASISSNPPTLYELEK	VISSVISASISSNPPTLYELEK	3	VISSVISASISSNPPTLYELEK3	71228.6	57838.9	61254.4
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	VISSVSYYTHR	VISSVSYYTHR	2	VISSVSYYTHR2		13658.4	16586.4
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	VISSVSYYTHR	VISSVSYYTHR	3	VISSVSYYTHR3	120847	134332	125290
Q5XI39	A0A8I6A215;Q5XI39	Q5XI39_RAT	Cryzl1	Crystallin zeta like 1	0	VISTAHSLEDK	VISTAHSLEDK	3	VISTAHSLEDK3	17401.9	11062.5	20607.9
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	VISTGVQAGIPMPCFTTALSFYDGYR	VISTGVQAGIPMPC(UniMod:4)FTTALSFYDGYR	3	VISTGVQAGIPMPC(UniMod:4)FTTALSFYDGYR3	7985.45		4787.72
B2RYN0	B2RYN0	B2RYN0_RAT	Pgm3	Phosphoacetylglucosamine mutase	1	VISTTDAER	VISTTDAER	2	VISTTDAER2	14813.4	17295.1	13407.7
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	VISTVTNNIQQIIEIEDTFETLR	VISTVTNNIQQIIEIEDTFETLR	3	VISTVTNNIQQIIEIEDTFETLR3	16897.7	16360.2	17156.6
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	VISVSTSER	VISVSTSER	2	VISVSTSER2	55312.4	47435.6	59465
Q62639	Q62639	RHEB_RAT	Rheb	GTP-binding protein Rheb	1	VISYEEGK	VISYEEGK	2	VISYEEGK2	400679	374253	398325
Q9JL55	Q9JL55	GDE1_RAT	Gde1	Glycerophosphodiester phosphodiesterase 1	1	VITALTHRPWSLSHTGDGKPR	VITALTHRPWSLSHTGDGKPR	4	VITALTHRPWSLSHTGDGKPR4	2746.7	5629.07	
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	VITDPSLSK	VITDPSLSK	2	VITDPSLSK2	42466	38089.4	26726.7
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	VITEAAILK	VITEAAILK	2	VITEAAILK2	66522.7	98159.7	74362.3
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	VITEAAILKK	VITEAAILKK	2	VITEAAILKK2	5442.42	5580.27	
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	VITELYQENEMK	VITELYQENEMK	2	VITELYQENEMK2	4704.71	6278.46	9172.66
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	VITEYLNAQESAK	VITEYLNAQESAK	2	VITEYLNAQESAK2	105971	92721.3	89593
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	VITEYLNAQESAK	VITEYLNAQESAK	3	VITEYLNAQESAK3	7445.73	4135.44	11511.1
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	VITFIDLAGHEK	VITFIDLAGHEK	2	VITFIDLAGHEK2	12751.4	16881.4	
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	VITFIDLAGHEK	VITFIDLAGHEK	3	VITFIDLAGHEK3	83989.8	91730.1	76948.3
P62271	D3ZM33;D4AA93;P62271;A0A0G2KA79;D3ZAU6	RS18_RAT	Rps18	Small ribosomal subunit protein uS13	0	VITIMQNPR	VITIMQNPR	2	VITIMQNPR2	60557.3	87408.9	78000.3
F1M1L9	F1M1L9	F1M1L9_RAT	Cpne2	Copine 2	1	VITLSLAGR	VITLSLAGR	2	VITLSLAGR2	2408.13	8334.51	3896.52
Q4QQS6	Q4QQS6	Q4QQS6_RAT	Alg5	dolichyl-phosphate beta-glucosyltransferase	1	VITLVQNR	VITLVQNR	2	VITLVQNR2	34433.1	44275.1	45599.8
D4A5U3	D4A5U3	TGM3_RAT	Tgm3	Protein-glutamine gamma-glutamyltransferase E	1	VITNFNSAHDTDR	VITNFNSAHDTDR	3	VITNFNSAHDTDR3	27072.1	24771.1	22774.5
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	VITNLVK	VITNLVK	2	VITNLVK2	73532.5	94012.6	75607.4
P31721	P31721	C1QB_RAT	C1qb	Complement C1q subcomponent subunit B	1	VITNVNDNYEPR	VITNVNDNYEPR	2	VITNVNDNYEPR2	61140.7	51119.9	48313.3
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	VITSAWWVHHHQVSK	VITSAWWVHHHQVSK	4	VITSAWWVHHHQVSK4	6503.38	16457.9	9643.17
Q561S0	A0A1W2Q6F8;Q561S0	NDUAA_RAT	Ndufa10	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial	0	VITVDGNICSGK	VITVDGNIC(UniMod:4)SGK	2	VITVDGNIC(UniMod:4)SGK2	79024.4	67112.1	66376.9
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	VITWTTEPK	VITWTTEPK	2	VITWTTEPK2	36199.9	35323.3	34089.2
Q7M733	Q7M733	HPS6_RAT	Hps6	BLOC-2 complex member HPS6	1	VIVAAPSLGLSHSK	VIVAAPSLGLSHSK	3	VIVAAPSLGLSHSK3	3220.99	5739.45	5858.67
P08699	P08699	LEG3_RAT	Lgals3	Galectin-3	1	VIVCNTK	VIVC(UniMod:4)NTK	2	VIVC(UniMod:4)NTK2	25435.4	16093.2	17301.8
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	VIVDFSSPNIAK	VIVDFSSPNIAK	2	VIVDFSSPNIAK2	98074	98542	111687
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	VIVGGVDLLAK	VIVGGVDLLAK	2	VIVGGVDLLAK2	17293	13088.6	18728.1
Q8CG09	A0A0G2K5H6;Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	0	VIVLDKGEIR	VIVLDKGEIR	3	VIVLDKGEIR3	58960.9	61319.7	70843.2
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	VIVLFAGQHISK	VIVLFAGQHISK	3	VIVLFAGQHISK3	5847.83		3491
Q8R4E1	Q8R4E1	TIP_RAT	Itfg1	T-cell immunomodulatory protein	1	VIVLSGLCSSDCPR	VIVLSGLC(UniMod:4)SSDC(UniMod:4)PR	2	VIVLSGLC(UniMod:4)SSDC(UniMod:4)PR2	10760.6	5314.04	19370.6
G3V6W5	G3V6W5	G3V6W5_RAT	Ifih1	RNA helicase	1	VIVLVNK	VIVLVNK	2	VIVLVNK2	2572.69	4134.38	4861.93
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	VIVMTTK	VIVMTTK	1	VIVMTTK1	3065.63		
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	VIVMTTK	VIVMTTK	2	VIVMTTK2	300682	289502	293747
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	VIVMTTR	VIVMTTR	2	VIVMTTR2	79166.4	89736	86004.3
D3ZPR0	D3ZPR0	D3ZPR0_RAT	Cse1l	Exportin-2	1	VIVPNMEFR	VIVPNMEFR	2	VIVPNMEFR2	51893.4	55987.6	46934.2
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	VIVQFQPSSVPDEWGTTQDGQTRPR	VIVQFQPSSVPDEWGTTQDGQTRPR	3	VIVQFQPSSVPDEWGTTQDGQTRPR3	135862	161342	168837
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	VIVQFQPSSVPDEWGTTQDGQTRPR	VIVQFQPSSVPDEWGTTQDGQTRPR	4	VIVQFQPSSVPDEWGTTQDGQTRPR4	12053	12969.6	10288
E9PT66	E9PT66	E9PT66_RAT	Sf3b3	Splicing factor 3b, subunit 3	1	VIVSDVQESFIWVR	VIVSDVQESFIWVR	2	VIVSDVQESFIWVR2		3867.87	2359.48
D3ZQQ1	D3ZQQ1	D3ZQQ1_RAT	Aftph	Aftiphilin	1	VIVSLPDLTFMHAK	VIVSLPDLTFMHAK	3	VIVSLPDLTFMHAK3	9528.91	8364.88	11396.5
P16232	P16232	DHI1_RAT	Hsd11b1	11-beta-hydroxysteroid dehydrogenase 1	1	VIVTGASK	VIVTGASK	2	VIVTGASK2	21451.5	18251.8	23895
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	VIVTSENGVR	VIVTSENGVR	2	VIVTSENGVR2	18248.6	23150.6	17414.1
O88989	O88989	MDHC_RAT	Mdh1	Malate dehydrogenase, cytoplasmic	1	VIVVGNPANTNCLTASK	VIVVGNPANTNC(UniMod:4)LTASK	2	VIVVGNPANTNC(UniMod:4)LTASK2	91566.5	70791.2	59771.2
O88989	O88989	MDHC_RAT	Mdh1	Malate dehydrogenase, cytoplasmic	1	VIVVGNPANTNCLTASK	VIVVGNPANTNC(UniMod:4)LTASK	3	VIVVGNPANTNC(UniMod:4)LTASK3	7323.98	6887.86	14578.4
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	VIVVITDGR	VIVVITDGR	2	VIVVITDGR2	51001.1	41836.7	54533.4
A0A8I6AEI3	A0A8I6AEI3	A0A8I6AEI3_RAT	Wwox	WW domain-containing oxidoreductase	1	VIVVSSESHR	VIVVSSESHR	2	VIVVSSESHR2	6922.35	8459.33	6870.2
P62882	P62882	GNB5_RAT	Gnb5	Guanine nucleotide-binding protein subunit beta-5	1	VIVWDSFTTNK	VIVWDSFTTNK	2	VIVWDSFTTNK2	15832.6	7645.74	10668.6
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	VIVYLGR	VIVYLGR	2	VIVYLGR2	54426.4	51290.9	41007.8
Q08602	Q08602	PGTA_RAT	Rabggta	Geranylgeranyl transferase type-2 subunit alpha	1	VIWTGSDSQK	VIWTGSDSQK	2	VIWTGSDSQK2	45638.9	34526.2	30197.2
A0A8I6AAX0	A0A8I6AAX0	A0A8I6AAX0_RAT	ENSRNOG00000064181	Ig-like domain-containing protein	1	VIYEDSK	VIYEDSK	1	VIYEDSK1	3363.78		3481.33
A0A8I6AAX0	A0A8I6AAX0	A0A8I6AAX0_RAT	ENSRNOG00000064181	Ig-like domain-containing protein	1	VIYEDSK	VIYEDSK	2	VIYEDSK2	387571	320694	343545
A0A8I6AAX0	A0A8I6AAX0	A0A8I6AAX0_RAT	ENSRNOG00000064181	Ig-like domain-containing protein	1	VIYEDSKRPSGISDR	VIYEDSKRPSGISDR	4	VIYEDSKRPSGISDR4	16939.8	18905.4	17592.2
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	VIYKQNNICFDNWWVDEYHTQADHSAAR	VIYKQNNIC(UniMod:4)FDNWWVDEYHTQADHSAAR	4	VIYKQNNIC(UniMod:4)FDNWWVDEYHTQADHSAAR4	8142.51	7202.74	5382.22
B4F795	B4F795	CTL2_RAT	Slc44a2	Choline transporter-like protein 2	1	VIYPTDSR	VIYPTDSR	2	VIYPTDSR2	925437	1.00635e+06	985159
Q6AXQ4	Q6AXQ4	MTM1_RAT	Mtm1	Myotubularin	1	VIYPVTSVR	VIYPVTSVR	2	VIYPVTSVR2	18826.2	16309.5	12211.5
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	VIYSQLSK	VIYSQLSK	2	VIYSQLSK2	52357.6	40170.9	54841.5
Q9JHY1	A0A8I6AER7;Q9JHY1	JAM1_RAT	F11r	Junctional adhesion molecule A	0	VIYSQPSAR	VIYSQPSAR	2	VIYSQPSAR2	1.84642e+06	1.86497e+06	2.05269e+06
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	VIYTLSALSWTPIAQNK	VIYTLSALSWTPIAQNK	2	VIYTLSALSWTPIAQNK2	23665	11389.4	20226.2
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	VIYTLSALSWTPIAQNK	VIYTLSALSWTPIAQNK	3	VIYTLSALSWTPIAQNK3	6441.17	14169.8	13485.7
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	VIYVLPMLTIK	VIYVLPMLTIK	2	VIYVLPMLTIK2	36578.6	30324.5	36389.9
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	VIYVLPMLTIKEDK	VIYVLPMLTIKEDK	3	VIYVLPMLTIKEDK3	11214.4	5432.15	15541.6
A0A0U1RS36	A0A0U1RS36	A0A0U1RS36_RAT	Marchf8	Membrane associated ring-CH-type finger 8	1	VIYVQNCPETSK	VIYVQNC(UniMod:4)PETSK	2	VIYVQNC(UniMod:4)PETSK2	6454.81	1833.21	6495.18
Q5FVL2	Q5FVL2	EMC8_RAT	Emc8	ER membrane protein complex subunit 8	1	VKDASPNQVAEK	VKDASPNQVAEK	2	VKDASPNQVAEK2			1160.75
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VKDDIESLHDK	VKDDIESLHDK	3	VKDDIESLHDK3	19922.5		
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VKDDIESLHDKFK	VKDDIESLHDKFK	4	VKDDIESLHDKFK4	35204.6	45961.5	28851.2
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	VKDFATVYVDAVK	VKDFATVYVDAVK	2	VKDFATVYVDAVK2	51287	54765	54995.9
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	VKDFATVYVDAVK	VKDFATVYVDAVK	3	VKDFATVYVDAVK3	1.45265e+06	1.88627e+06	2.08317e+06
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	VKDFATVYVDAVKDSGR	VKDFATVYVDAVKDSGR	3	VKDFATVYVDAVKDSGR3	8344.56	1583.12	11614.2
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	VKDFATVYVDAVKDSGR	VKDFATVYVDAVKDSGR	4	VKDFATVYVDAVKDSGR4	17100.8	17245.7	12487.4
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	VKDLLGWVSTLAR	VKDLLGWVSTLAR	3	VKDLLGWVSTLAR3	9866.13	11771.2	6251.45
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	VKDLTVQK	VKDLTVQK	2	VKDLTVQK2	12007.2	9595.9	7589
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	VKDLYSGLIGPLIVCR	VKDLYSGLIGPLIVC(UniMod:4)R	3	VKDLYSGLIGPLIVC(UniMod:4)R3	12357.3	5679.83	9937.88
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	VKDMAPLPESEVALGK	VKDMAPLPESEVALGK	3	VKDMAPLPESEVALGK3	18308.3	16864.2	12592.4
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	VKDMAPLPESEVALGKDVVTLPETK	VKDMAPLPESEVALGKDVVTLPETK	4	VKDMAPLPESEVALGKDVVTLPETK4	5011.68	12451.4	2415.49
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	VKDPNSGLPK	VKDPNSGLPK	2	VKDPNSGLPK2	103574	87634.6	72148.5
D3Z8L7	D3Z8L7	RRAS_RAT	Rras	Ras-related protein R-Ras	1	VKDRDDFPIVLVGNK	VKDRDDFPIVLVGNK	3	VKDRDDFPIVLVGNK3	68807.3	77474.2	70976.5
D3Z8L7	D3Z8L7	RRAS_RAT	Rras	Ras-related protein R-Ras	1	VKDRDDFPIVLVGNK	VKDRDDFPIVLVGNK	4	VKDRDDFPIVLVGNK4	104556	95023.1	120743
Q5BJU0	Q5BJU0	Q5BJU0_RAT	Rras2	RAS related 2	1	VKDRDEFPMILIGNK	VKDRDEFPMILIGNK	3	VKDRDEFPMILIGNK3	4458.48	1983.37	4066.79
Q5BJU0	Q5BJU0	Q5BJU0_RAT	Rras2	RAS related 2	1	VKDRDEFPMILIGNK	VKDRDEFPMILIGNK	4	VKDRDEFPMILIGNK4	8410.33	13092.9	14244.2
Q04970	Q04970;A0A8I6AHV4;P20171	RASN_RAT	Nras	GTPase NRas	0	VKDSDDVPMVLVGNK	VKDSDDVPMVLVGNK	3	VKDSDDVPMVLVGNK3	39195.3	47766.2	31516.6
P08644	P08644	RASK_RAT	Kras	GTPase KRas	1	VKDSEDVPMVLVGNK	VKDSEDVPMVLVGNK	2	VKDSEDVPMVLVGNK2	2233.95	2451.22	
P08644	P08644	RASK_RAT	Kras	GTPase KRas	1	VKDSEDVPMVLVGNK	VKDSEDVPMVLVGNK	3	VKDSEDVPMVLVGNK3	11352.4	10800.8	20359.9
Q62636	Q62636	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	1	VKDTDDVPMILVGNK	VKDTDDVPMILVGNK	2	VKDTDDVPMILVGNK2	672113	628713	610828
Q62636	Q62636	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	1	VKDTDDVPMILVGNK	VKDTDDVPMILVGNK	3	VKDTDDVPMILVGNK3	4.8697e+06	4.89013e+06	5.31157e+06
P62836	P62836	RAP1A_RAT	Rap1a	Ras-related protein Rap-1A	1	VKDTEDVPMILVGNK	VKDTEDVPMILVGNK	2	VKDTEDVPMILVGNK2	54559.8	46857.9	46481.5
P62836	P62836	RAP1A_RAT	Rap1a	Ras-related protein Rap-1A	1	VKDTEDVPMILVGNK	VKDTEDVPMILVGNK	3	VKDTEDVPMILVGNK3	467430	519053	540134
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	VKDTSLAFESK	VKDTSLAFESK	2	VKDTSLAFESK2	11309.3	7930.61	11344.8
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	VKDTSLAFESK	VKDTSLAFESK	3	VKDTSLAFESK3	46161.2	46946.7	56708
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	VKDVLLK	VKDVLLK	2	VKDVLLK2	12052.6	8769.68	15627.4
Q6P7C7	Q6P7C7	GPNMB_RAT	Gpnmb	Transmembrane glycoprotein NMB	1	VKDVYVITDQIPIFVTMYQK	VKDVYVITDQIPIFVTMYQK	3	VKDVYVITDQIPIFVTMYQK3	20756.3	37684.4	26284.7
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	VKEDEDDK	VKEDEDDK	1	VKEDEDDK1			1184.98
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	VKEDEDDK	VKEDEDDK	2	VKEDEDDK2		5218.48	2875.92
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	VKEDEDDKTVMDLAVVLFETATLR	VKEDEDDKTVMDLAVVLFETATLR	4	VKEDEDDKTVMDLAVVLFETATLR4		8506.95	14580.8
P63322	P63322	RALA_RAT	Rala	Ras-related protein Ral-A	1	VKEDENVPFLLVGNK	VKEDENVPFLLVGNK	2	VKEDENVPFLLVGNK2	6878.32	3331.16	5066.03
P63322	P63322	RALA_RAT	Rala	Ras-related protein Ral-A	1	VKEDENVPFLLVGNK	VKEDENVPFLLVGNK	3	VKEDENVPFLLVGNK3	30213.7	34273.9	45222.3
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	VKEDRFENNELFAK	VKEDRFENNELFAK	3	VKEDRFENNELFAK3		8413.05	14840.6
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	VKEDRFENNELFAK	VKEDRFENNELFAK	4	VKEDRFENNELFAK4	22416	31249	28956.4
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	VKEEESLENIPSVK	VKEEESLENIPSVK	2	VKEEESLENIPSVK2	8018.06	8473.03	6445.86
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	VKEEESLENIPSVK	VKEEESLENIPSVK	3	VKEEESLENIPSVK3	37926.6	41570.3	36457.7
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	VKEEESLENIPSVKK	VKEEESLENIPSVKK	4	VKEEESLENIPSVKK4	5915.7	10763.2	11250.3
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	VKEEQEVFVHSGPNSQK	VKEEQEVFVHSGPNSQK	3	VKEEQEVFVHSGPNSQK3	6061.57	12430.9	4290.04
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	VKEEQEVFVHSGPNSQK	VKEEQEVFVHSGPNSQK	4	VKEEQEVFVHSGPNSQK4	19408.2	17217	17309.6
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	VKEESQVPATQTVQR	VKEESQVPATQTVQR	2	VKEESQVPATQTVQR2	5555.92	6151.22	
Q5QD51	Q5QD51	AKA12_RAT	Akap12	A-kinase anchor protein 12	1	VKEESQVPATQTVQR	VKEESQVPATQTVQR	3	VKEESQVPATQTVQR3	61671.6	68991.8	67474.4
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	VKEESSSISSLK	VKEESSSISSLK	3	VKEESSSISSLK3		7856.47	3211.7
Q5FVJ0	Q5FVJ0	RUFY3_RAT	Rufy3	Protein RUFY3	1	VKEESSYLLESNRK	VKEESSYLLESNRK	4	VKEESSYLLESNRK4	1969.77		
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	VKEFCENLSADCR	VKEFC(UniMod:4)ENLSADC(UniMod:4)R	3	VKEFC(UniMod:4)ENLSADC(UniMod:4)R3	19138.4	23159	23311
P10111	P10111;A0A8I6A629	PPIA_RAT	Ppia	Peptidyl-prolyl cis-trans isomerase A	0	VKEGMSIVEAMER	VKEGMSIVEAMER	2	VKEGMSIVEAMER2	22497.4	28421.3	35094.9
P10111	P10111;A0A8I6A629	PPIA_RAT	Ppia	Peptidyl-prolyl cis-trans isomerase A	0	VKEGMSIVEAMER	VKEGMSIVEAMER	3	VKEGMSIVEAMER3	162197	172088	198887
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VKEHINSVSAMK	VKEHINSVSAMK	3	VKEHINSVSAMK3	35274.4	38406.4	29651.8
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	VKEIVAQHTK	VKEIVAQHTK	2	VKEIVAQHTK2			1306.96
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	VKELDVLGELR	VKELDVLGELR	2	VKELDVLGELR2	13391.7	18269.4	17122.7
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	VKELDVLGELR	VKELDVLGELR	3	VKELDVLGELR3	24658	25644.7	17738.6
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	VKELFHPYAER	VKELFHPYAER	3	VKELFHPYAER3	57083.5	46799.5	57027.5
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	VKELVEFAQDDDRLR	VKELVEFAQDDDRLR	3	VKELVEFAQDDDRLR3	33475	45978.5	41602.5
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	VKELVEFAQDDDRLR	VKELVEFAQDDDRLR	4	VKELVEFAQDDDRLR4	68340.3	67049.6	89893.3
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	VKENELQYLK	VKENELQYLK	2	VKENELQYLK2	5645.43	1433.39	3467.7
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	VKENELQYLK	VKENELQYLK	3	VKENELQYLK3	27516.9	32337.7	26817.4
P04916	P04916	RET4_RAT	Rbp4	Retinol-binding protein 4	1	VKENFDK	VKENFDK	2	VKENFDK2	41852.5		37396.3
P43527	P43527	CASP1_RAT	Casp1	Caspase-1	1	VKENLTALEMTK	VKENLTALEMTK	3	VKENLTALEMTK3	4025.91		8261.69
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	VKEPGESPIFWYAPESLTESK	VKEPGESPIFWYAPESLTESK	3	VKEPGESPIFWYAPESLTESK3	82272.5	84794.5	87415.5
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	VKEQFLQQK	VKEQFLQQK	3	VKEQFLQQK3	6467.34		10231.8
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	VKEQMEAVGTSLSLSADSLITPR	VKEQMEAVGTSLSLSADSLITPR	3	VKEQMEAVGTSLSLSADSLITPR3	9285.69	5872.26	4696.27
A0A8I5ZV49	A0A0G2JXT8;A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	0	VKESITR	VKESITR	2	VKESITR2			107212
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VKETADFK	VKETADFK	1	VKETADFK1	24327.7	18552.7	23578.8
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VKETADFK	VKETADFK	2	VKETADFK2	1.44554e+06	1.48071e+06	1.48508e+06
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	VKETFSSNK	VKETFSSNK	2	VKETFSSNK2	415175	8872.74	1.75257e+06
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	VKETFSSNKK	VKETFSSNKK	2	VKETFSSNKK2			62202.3
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	VKETFSSNKK	VKETFSSNKK	3	VKETFSSNKK3			4.60404e+06
A1L134	A1L134	AUP1_RAT	Aup1	Lipid droplet-regulating VLDL assembly factor AUP1	1	VKEVLPHVPLNVIQR	VKEVLPHVPLNVIQR	3	VKEVLPHVPLNVIQR3	36331.1	32797.8	40997.3
A1L134	A1L134	AUP1_RAT	Aup1	Lipid droplet-regulating VLDL assembly factor AUP1	1	VKEVLPHVPLNVIQR	VKEVLPHVPLNVIQR	4	VKEVLPHVPLNVIQR4	23161.4	19974.2	22442.2
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	VKEVQPGQSQVSYQGLPVQK	VKEVQPGQSQVSYQGLPVQK	3	VKEVQPGQSQVSYQGLPVQK3	287964	347927	350879
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	VKEVSAQWDHLK	VKEVSAQWDHLK	3	VKEVSAQWDHLK3	6800.08	3994.62	1786.51
D3ZMI6	D3ZMI6	D3ZMI6_RAT	Olfm4	Olfactomedin 4	1	VKEYVQLISVYEK	VKEYVQLISVYEK	2	VKEYVQLISVYEK2	3346.38	4963.47	1616.12
D3ZMI6	D3ZMI6	D3ZMI6_RAT	Olfm4	Olfactomedin 4	1	VKEYVQLISVYEK	VKEYVQLISVYEK	3	VKEYVQLISVYEK3	24410.1	24903.8	26629.1
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	VKFPPNIVNIHVK	VKFPPNIVNIHVK	3	VKFPPNIVNIHVK3	5794.46		10328.9
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	VKGNNVYCLDR	VKGNNVYC(UniMod:4)LDR	3	VKGNNVYC(UniMod:4)LDR3	18946.2	21645.4	24147.9
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	VKGVVSFPIRVEPGMAPVAK	VKGVVSFPIRVEPGMAPVAK	3	VKGVVSFPIRVEPGMAPVAK3	5036.07	14663.8	23001.4
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	VKGVVSFPIRVEPGMAPVAK	VKGVVSFPIRVEPGMAPVAK	4	VKGVVSFPIRVEPGMAPVAK4	50638.3	51518.6	62260.2
B1WC26	B1WC26	B1WC26_RAT	Nans	N-acetylneuraminate synthase	1	VKIPAGTILTLDMLTVK	VKIPAGTILTLDMLTVK	3	VKIPAGTILTLDMLTVK3	6978.47	6796.32	5906.95
Q0PMD2	Q0PMD2	ANTR1_RAT	Antxr1	Anthrax toxin receptor 1	1	VKMPEQEYEFPEPR	VKMPEQEYEFPEPR	2	VKMPEQEYEFPEPR2	1367.93		6521.25
Q0PMD2	Q0PMD2	ANTR1_RAT	Antxr1	Anthrax toxin receptor 1	1	VKMPEQEYEFPEPR	VKMPEQEYEFPEPR	3	VKMPEQEYEFPEPR3	25873	40555.3	39670.8
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	VKNGGCYHYCLEETR	VKNGGC(UniMod:4)YHYC(UniMod:4)LEETR	4	VKNGGC(UniMod:4)YHYC(UniMod:4)LEETR4		2880.6	
Q7TP98	Q7TP98	ILF2_RAT	Ilf2	Interleukin enhancer-binding factor 2	1	VKPAPDETSFSEALLK	VKPAPDETSFSEALLK	3	VKPAPDETSFSEALLK3	17334.5	13142.1	15940.5
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	VKPEEETAVLK	VKPEEETAVLK	3	VKPEEETAVLK3	9391.75	11749.5	10091.4
A0A8I6ANT5	P63029;A0A8I6ANT5	A0A8I6ANT5_RAT	Tpt1-ps1	Similar to tumor protein, translationally-controlled 1	0	VKPFMTGAAEQIK	VKPFMTGAAEQIK	2	VKPFMTGAAEQIK2	33690.3		13549.5
A0A8I6ANT5	P63029;A0A8I6ANT5	A0A8I6ANT5_RAT	Tpt1-ps1	Similar to tumor protein, translationally-controlled 1	0	VKPFMTGAAEQIK	VKPFMTGAAEQIK	3	VKPFMTGAAEQIK3	139941	122795	116032
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	VKPIVTPR	VKPIVTPR	2	VKPIVTPR2	38071.2	28521.1	27175.5
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	VKPLHYISWLVGHEGK	VKPLHYISWLVGHEGK	4	VKPLHYISWLVGHEGK4	26971.1	37972.1	34181.9
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VKPLLNSIR	VKPLLNSIR	2	VKPLLNSIR2	3.67771e+06	3.86487e+06	3.43135e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VKPLLNSIRHEDELLAK	VKPLLNSIRHEDELLAK	3	VKPLLNSIRHEDELLAK3	304394	353211	318413
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VKPLLNSIRHEDELLAK	VKPLLNSIRHEDELLAK	4	VKPLLNSIRHEDELLAK4	572467	923145	979064
Q32KJ6	Q32KJ6	GALNS_RAT	Galns	N-acetylgalactosamine-6-sulfatase	1	VKPNIPVYR	VKPNIPVYR	2	VKPNIPVYR2	8134.77	7529.04	10887.4
O08874	O08874	PKN2_RAT	Pkn2	Serine/threonine-protein kinase N2	1	VKPPFVPTIR	VKPPFVPTIR	3	VKPPFVPTIR3	18447.8	11567.5	15674.6
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	VKPQFQEILR	VKPQFQEILR	2	VKPQFQEILR2	19143	17625	15488
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	VKPQFQEILR	VKPQFQEILR	3	VKPQFQEILR3	71255.3	75927.7	63865.1
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	VKPQPPLSDAYLSGMPAK	VKPQPPLSDAYLSGMPAK	3	VKPQPPLSDAYLSGMPAK3	159406	151242	168743
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	VKPQPPLSDAYLSGMPAKR	VKPQPPLSDAYLSGMPAKR	4	VKPQPPLSDAYLSGMPAKR4	9573.73	8511.72	7373.74
P13721	P13721	SIAT1_RAT	St6gal1	Beta-galactoside alpha-2,6-sialyltransferase 1	1	VKPQPSFQVWDKDSTYSK	VKPQPSFQVWDKDSTYSK	4	VKPQPSFQVWDKDSTYSK4	5866.51	3075	
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	VKPTTIIFDDDEGDLFK	VKPTTIIFDDDEGDLFK	3	VKPTTIIFDDDEGDLFK3	8660.79	8864.65	9908.42
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	VKPTTIIFDDDEGDLFKEK	VKPTTIIFDDDEGDLFKEK	3	VKPTTIIFDDDEGDLFKEK3			2657.62
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	VKPTTIIFDDDEGDLFKEK	VKPTTIIFDDDEGDLFKEK	4	VKPTTIIFDDDEGDLFKEK4	13180.1	20275.8	10367.3
Q5M9F6	Q5M9F6	Q5M9F6_RAT	Mthfs	5-formyltetrahydrofolate cyclo-ligase	1	VKPYTLALAFR	VKPYTLALAFR	3	VKPYTLALAFR3	14574.1	12453.4	12628.9
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	VKSPAEEPLFPAPLLLR	VKSPAEEPLFPAPLLLR	3	VKSPAEEPLFPAPLLLR3	8417.26	5458.2	10640.7
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	VKSPYDCSNFDK	VKSPYDC(UniMod:4)SNFDK	3	VKSPYDC(UniMod:4)SNFDK3	6607.72	6899.16	8225.32
B2RYN0	B2RYN0	B2RYN0_RAT	Pgm3	Phosphoacetylglucosamine mutase	1	VLAAIVER	VLAAIVER	2	VLAAIVER2	24062.4	28318	26118.7
A0A8I6ASC6	A0A8I6ASC6	A0A8I6ASC6_RAT	Igdcc4	Immunoglobulin superfamily, DCC subclass, member 4	1	VLAAPAISQAPEALSR	VLAAPAISQAPEALSR	2	VLAAPAISQAPEALSR2	18827.2	13437.5	7844.54
D3ZWS0	D3ZWS0	D3ZWS0_RAT	Scrib	Scribble planar cell polarity protein	1	VLAAVPSAGSLQR	VLAAVPSAGSLQR	2	VLAAVPSAGSLQR2	11374.4	13125.2	18964.6
Q58NB7	Q58NB7	Q58NB7_RAT	Rarres1	Retinoic acid receptor responder (Tazarotene induced) 1	1	VLAAVQEGR	VLAAVQEGR	2	VLAAVQEGR2	241923	231572	241298
P05065	A0A8I6ANB6;P00884;Q6AY07;P09117;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	VLAAVYK	VLAAVYK	1	VLAAVYK1	4804.68	5333.9	2675.53
P05065	A0A8I6ANB6;P00884;Q6AY07;P09117;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	VLAAVYK	VLAAVYK	2	VLAAVYK2	336978	273890	311177
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	VLACGGDGTVGWILDCIDK	VLAC(UniMod:4)GGDGTVGWILDC(UniMod:4)IDK	3	VLAC(UniMod:4)GGDGTVGWILDC(UniMod:4)IDK3	4308.02	5341.74	3705.3
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	VLACGLNEFNK	VLAC(UniMod:4)GLNEFNK	2	VLAC(UniMod:4)GLNEFNK2	57110.3	55485.1	60514.9
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	VLACPFLR	VLAC(UniMod:4)PFLR	2	VLAC(UniMod:4)PFLR2	44136	40216.1	57206
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	VLADALVVGPSSRPPPGLSLR	VLADALVVGPSSRPPPGLSLR	3	VLADALVVGPSSRPPPGLSLR3	45087.3	31370.8	38201.6
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	VLADNLK	VLADNLK	2	VLADNLK2	77974.4	63034.6	72846.7
P30427	A0A8I6AHY5;P30427	PLEC_RAT	Plec	Plectin	0	VLADPSDDTK	VLADPSDDTK	2	VLADPSDDTK2	24519.8	27098.3	20838.4
Q641X3	Q641X3	HEXA_RAT	Hexa	Beta-hexosaminidase subunit alpha	1	VLAEFDTPGHTLSWGAGVPGLLTPCYSGSR	VLAEFDTPGHTLSWGAGVPGLLTPC(UniMod:4)YSGSR	4	VLAEFDTPGHTLSWGAGVPGLLTPC(UniMod:4)YSGSR4		3453.22	6732.17
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	VLAELLFQELQPHFNK	VLAELLFQELQPHFNK	2	VLAELLFQELQPHFNK2	1784.02	6024.43	
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	VLAELLFQELQPHFNK	VLAELLFQELQPHFNK	3	VLAELLFQELQPHFNK3	7728.18	7839.47	7199.27
A0A8I6GLQ4	A0A8I6GLQ4	A0A8I6GLQ4_RAT	Naip5	NLR family, apoptosis inhibitory protein 5	1	VLAFHHVLDDDSVTEVAR	VLAFHHVLDDDSVTEVAR	3	VLAFHHVLDDDSVTEVAR3		6525.23	
A0A8I6AAF1	A0A8I6AAF1	A0A8I6AAF1_RAT	Card19	Caspase recruitment domain family, member 19	1	VLAFSPVIIDR	VLAFSPVIIDR	2	VLAFSPVIIDR2	58642.8	56710.1	45597.6
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	VLAFTAVGDGPPSPTIQVK	VLAFTAVGDGPPSPTIQVK	2	VLAFTAVGDGPPSPTIQVK2	8632.71	3747.75	8234.83
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	VLAGDKNFITAEELR	VLAGDKNFITAEELR	3	VLAGDKNFITAEELR3	65266.8	48186.2	78374.3
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	VLAGDKNFITAEELRR	VLAGDKNFITAEELRR	4	VLAGDKNFITAEELRR4	7067.73	13496.3	11023.8
Q9JIL3	Q9JIL3	ILF3_RAT	Ilf3	Interleukin enhancer-binding factor 3	1	VLAGETLSVNDPPDVLDR	VLAGETLSVNDPPDVLDR	2	VLAGETLSVNDPPDVLDR2	3657.62	3613.79	
Q9Z1K9	Q9Z1K9	ADA17_RAT	Adam17	Disintegrin and metalloproteinase domain-containing protein 17	1	VLAHIGDDDVTVR	VLAHIGDDDVTVR	3	VLAHIGDDDVTVR3	7120.66	3711.29	9605.17
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	VLAINILGR	VLAINILGR	2	VLAINILGR2	58193.5	45291.3	54302.1
D4A3T4	D4A3T4	D4A3T4_RAT	Zfyve1	Zinc finger FYVE-type containing 1	1	VLAISDLVIYR	VLAISDLVIYR	2	VLAISDLVIYR2	3602.48	6533.06	3023.84
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	VLAISPEEQK	VLAISPEEQK	2	VLAISPEEQK2	22664.6	22489.1	24742.4
Q5PQN7	Q5PQN7	LZIC_RAT	Lzic	Protein LZIC	1	VLALAGFEVEK	VLALAGFEVEK	2	VLALAGFEVEK2	11967.8	8400.2	
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	VLALDAAAFLK	VLALDAAAFLK	2	VLALDAAAFLK2	26777.2	37728.9	22947.7
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	VLALDAAAFLKK	VLALDAAAFLKK	3	VLALDAAAFLKK3	13157.8	13333.9	13558.8
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	VLALGYK	VLALGYK	2	VLALGYK2	24539.7	27905.9	24825.8
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	VLALLDKPPFLTQLHSCFQTVDR	VLALLDKPPFLTQLHSC(UniMod:4)FQTVDR	4	VLALLDKPPFLTQLHSC(UniMod:4)FQTVDR4	81964.6	69633.2	74459.2
D4AD37	D4AD37	IMPA3_RAT	Bpnt2	Golgi-resident adenosine 3',5'-bisphosphate 3'-phosphatase	1	VLALLDVPDMTQEK	VLALLDVPDMTQEK	2	VLALLDVPDMTQEK2	50504.5	48228.6	58410
D4AD37	D4AD37	IMPA3_RAT	Bpnt2	Golgi-resident adenosine 3',5'-bisphosphate 3'-phosphatase	1	VLALLDVPDMTQEK	VLALLDVPDMTQEK	3	VLALLDVPDMTQEK3	7002.1	9491.86	10351.4
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	VLALLTGLMAELK	VLALLTGLMAELK	2	VLALLTGLMAELK2	4758.49		
Q4KLN3	Q4KLN3	Q4KLN3_RAT	Srpk1	SRSF protein kinase 1	1	VLALQAR	VLALQAR	2	VLALQAR2	25134	45953.6	24418.7
G3V6Q3	G3V6Q3	G3V6Q3_RAT	Wdr13	Uncharacterized protein	1	VLALSFDAPGR	VLALSFDAPGR	2	VLALSFDAPGR2	30930	34766.4	21106.9
P19945	D3ZJT4;P19945	RLA0_RAT	Rplp0	Large ribosomal subunit protein uL10	0	VLALSVETDYTFPLAEK	VLALSVETDYTFPLAEK	2	VLALSVETDYTFPLAEK2	21797.2	13472.5	19578.5
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	VLALVQEVPR	VLALVQEVPR	2	VLALVQEVPR2	11114	14058.1	10793.7
F1LP42	F1LP42	F1LP42_RAT	Ihh	Hedgehog protein	1	VLAMGEDGNPTFSDVLIFLDREPNR	VLAMGEDGNPTFSDVLIFLDREPNR	3	VLAMGEDGNPTFSDVLIFLDREPNR3	40753.4	24067.8	29005.2
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	VLAMSGDPNYLHR	VLAMSGDPNYLHR	2	VLAMSGDPNYLHR2	30949	35402.1	17911
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	VLAMSGDPNYLHR	VLAMSGDPNYLHR	3	VLAMSGDPNYLHR3	517273	573008	456678
A0A8I6AW91	A0A8I6AW91	A0A8I6AW91_RAT	Srp72	Signal recognition particle subunit SRP72	1	VLANNSLSFEK	VLANNSLSFEK	2	VLANNSLSFEK2	11207	10399.8	4665.86
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	VLANPGNSQVAR	VLANPGNSQVAR	2	VLANPGNSQVAR2	747720	711165	700823
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	VLAPCSPSEER	VLAPC(UniMod:4)SPSEER	2	VLAPC(UniMod:4)SPSEER2	23433.1	17778.4	25288.9
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	VLAPCSPSEERR	VLAPC(UniMod:4)SPSEERR	3	VLAPC(UniMod:4)SPSEERR3	36481.4	35886.7	34739.1
Q03555	Q03555	GEPH_RAT	Gphn	Gephyrin	1	VLAQDVYAK	VLAQDVYAK	2	VLAQDVYAK2	15406.8	13358.6	12816.7
A0A0G2K4S7	A0A0G2K4S7	A0A0G2K4S7_RAT	Usp45	Ubiquitin carboxyl-terminal hydrolase	1	VLAQIVDFLQK	VLAQIVDFLQK	2	VLAQIVDFLQK2	7176.89	3140.19	7760.46
Q9QXU9	Q9QXU9	PCS1N_RAT	Pcsk1n	ProSAAS	1	VLAQLLR	VLAQLLR	2	VLAQLLR2	23979.3	16195.4	20356.4
F7ELS2	A0A8I6AGL9;F7ELS2;A0A8I6GM53	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	0	VLAQNSGFDLQETLVK	VLAQNSGFDLQETLVK	2	VLAQNSGFDLQETLVK2	61193.7	44965.6	62225
F7ELS2	A0A8I6AGL9;F7ELS2;A0A8I6GM53	F7ELS2_RAT	Cct6a	Chaperonin containing TCP1 subunit 6A	0	VLAQNSGFDLQETLVK	VLAQNSGFDLQETLVK	3	VLAQNSGFDLQETLVK3	23277.4	22855.6	32943.7
Q3B7U9	Q3B7U9	FKBP8_RAT	Fkbp8	Peptidyl-prolyl cis-trans isomerase FKBP8	1	VLAQQGEYSEAIPILR	VLAQQGEYSEAIPILR	2	VLAQQGEYSEAIPILR2	37890.7	37982.8	43251.7
Q3B7U9	Q3B7U9	FKBP8_RAT	Fkbp8	Peptidyl-prolyl cis-trans isomerase FKBP8	1	VLAQQGEYSEAIPILR	VLAQQGEYSEAIPILR	3	VLAQQGEYSEAIPILR3	9876.14	8370.82	8493.68
P70569	P70569	MYO5B_RAT	Myo5b	Unconventional myosin-Vb	1	VLASSPIMEAIGNAK	VLASSPIMEAIGNAK	2	VLASSPIMEAIGNAK2	6381.67		4847.17
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	VLASVSLGK	VLASVSLGK	2	VLASVSLGK2	20616.2	10549	14220.2
P97849	P97849	S27A1_RAT	Slc27a1	Long-chain fatty acid transport protein 1	1	VLASYAQPIFLR	VLASYAQPIFLR	2	VLASYAQPIFLR2	10053.3	6214.31	7241.74
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	VLATAFDTTLGGR	VLATAFDTTLGGR	2	VLATAFDTTLGGR2	136751	129051	128734
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	VLATAFDTTLGGR	VLATAFDTTLGGR	3	VLATAFDTTLGGR3	17922.9	16427.5	14597
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	VLATAFDTTLGGRK	VLATAFDTTLGGRK	2	VLATAFDTTLGGRK2	6462.82	5389.19	6936.88
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	VLATAFDTTLGGRK	VLATAFDTTLGGRK	3	VLATAFDTTLGGRK3	175942	208898	233354
Q8R511	Q8R511	FNBP1_RAT	Fnbp1	Formin-binding protein 1	1	VLATDFDDEFDDEEPLPAIGTCK	VLATDFDDEFDDEEPLPAIGTC(UniMod:4)K	3	VLATDFDDEFDDEEPLPAIGTC(UniMod:4)K3	23893.3	12568.3	21651.6
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	VLATLCGQESTDTER	VLATLC(UniMod:4)GQESTDTER	2	VLATLC(UniMod:4)GQESTDTER2	75281	103085	92650.3
A0A8I5YCH6	A0A8I5YCH6	A0A8I5YCH6_RAT	Aaas	Aladin WD repeat nucleoporin	1	VLATTPSAVFR	VLATTPSAVFR	2	VLATTPSAVFR2	9018.78	8448.58	15207.4
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	VLATVDVNLAQHAGPVPAQVPLR	VLATVDVNLAQHAGPVPAQVPLR	3	VLATVDVNLAQHAGPVPAQVPLR3	167688	191460	149206
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	VLATVDVNLAQHAGPVPAQVPLR	VLATVDVNLAQHAGPVPAQVPLR	4	VLATVDVNLAQHAGPVPAQVPLR4	6513.62	12890.4	
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	VLAVNQENEHLMEDYER	VLAVNQENEHLMEDYER	3	VLAVNQENEHLMEDYER3	1.5356e+06	1.58563e+06	1.62357e+06
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	VLAVNQENEQLMEDYEK	VLAVNQENEQLMEDYEK	3	VLAVNQENEQLMEDYEK3	30451.1	32099	26648.8
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	VLAVNSIGR	VLAVNSIGR	2	VLAVNSIGR2	28599.8	26127	33485.4
D3ZRJ7	D3ZRJ7	D3ZRJ7_RAT	Lrrk1	non-specific serine/threonine protein kinase	1	VLAVQDLIWVPR	VLAVQDLIWVPR	2	VLAVQDLIWVPR2	4896.33	6395.49	2282.09
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	VLAVTETCLVER	VLAVTETC(UniMod:4)LVER	2	VLAVTETC(UniMod:4)LVER2	4294.37	5621.02	2811.09
P53676	P53676	AP3M1_RAT	Ap3m1	AP-3 complex subunit mu-1	1	VLAWDVGK	VLAWDVGK	2	VLAWDVGK2	43705.3	48853.4	53620.9
Q9JLU4	Q9JLU4	SHAN3_RAT	Shank3	SH3 and multiple ankyrin repeat domains protein 3	1	VLCALNHSLQDALNYGLFQPPSR	VLC(UniMod:4)ALNHSLQDALNYGLFQPPSR	3	VLC(UniMod:4)ALNHSLQDALNYGLFQPPSR3	3743.36		
D3ZW38	D3ZW38	D3ZW38_RAT	Exosc6	Exosome component 6	1	VLCAVSGPR	VLC(UniMod:4)AVSGPR	2	VLC(UniMod:4)AVSGPR2	14291.4	15446.8	
D4A758	D4A758	D4A758_RAT	Lrrc8b	Leucine rich repeat containing 8 VRAC subunit B	1	VLCCLPCK	VLC(UniMod:4)C(UniMod:4)LPC(UniMod:4)K	2	VLC(UniMod:4)C(UniMod:4)LPC(UniMod:4)K2	14963.7	17001.9	8661.58
D3ZS41	D3ZS41	D3ZS41_RAT	Ecm2	Extracellular matrix protein 2	1	VLCDETTCPPK	VLC(UniMod:4)DETTC(UniMod:4)PPK	2	VLC(UniMod:4)DETTC(UniMod:4)PPK2	9228.75	12279.6	13991.5
D4ADT7	D4ADT7	D4ADT7_RAT	Nod1	Nucleotide-binding oligomerization domain containing 1	1	VLCEELTK	VLC(UniMod:4)EELTK	2	VLC(UniMod:4)EELTK2	10941.5	13130.1	19008.8
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	VLCELADLQDK	VLC(UniMod:4)ELADLQDK	2	VLC(UniMod:4)ELADLQDK2	10442.6	3231.55	4295.26
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	VLCELADLQDKEVGDGTTSVVIIAAELLK	VLC(UniMod:4)ELADLQDKEVGDGTTSVVIIAAELLK	4	VLC(UniMod:4)ELADLQDKEVGDGTTSVVIIAAELLK4	5154.34		
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	VLCETEVCPPLLCQNPSR	VLC(UniMod:4)ETEVC(UniMod:4)PPLLC(UniMod:4)QNPSR	3	VLC(UniMod:4)ETEVC(UniMod:4)PPLLC(UniMod:4)QNPSR3	93095	107559	107695
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	VLCGDAGLLR	VLC(UniMod:4)GDAGLLR	2	VLC(UniMod:4)GDAGLLR2	40718.6	50149.6	57953.5
A0A0G2K652	A0A0G2K652	A0A0G2K652_RAT	Cul9	Cullin 9	1	VLCHEGSPQGAMTPLLK	VLC(UniMod:4)HEGSPQGAMTPLLK	3	VLC(UniMod:4)HEGSPQGAMTPLLK3		2268.62	2945.62
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	VLCIIQDTTNSK	VLC(UniMod:4)IIQDTTNSK	2	VLC(UniMod:4)IIQDTTNSK2	30357.8	39949.5	26058.5
P62907	F1LYQ7;A0A8I6A8X9;A0A8I5Y9H0;P62907;A0A8I5ZRE5	RL10A_RAT	Rpl10a	Large ribosomal subunit protein uL1	0	VLCLAVAVGHVK	VLC(UniMod:4)LAVAVGHVK	3	VLC(UniMod:4)LAVAVGHVK3		6552.88	
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	VLCMDAK	VLC(UniMod:4)MDAK	2	VLC(UniMod:4)MDAK2	200770	194803	220377
P62882	P62882	GNB5_RAT	Gnb5	Guanine nucleotide-binding protein subunit beta-5	1	VLCMDWCK	VLC(UniMod:4)MDWC(UniMod:4)K	2	VLC(UniMod:4)MDWC(UniMod:4)K2	4607.9	7013.64	5805.39
Q5RJS8	Q5RJS8	TPST2_RAT	Tpst2	Protein-tyrosine sulfotransferase 2	1	VLCNKDPFTLK	VLC(UniMod:4)NKDPFTLK	2	VLC(UniMod:4)NKDPFTLK2	4664.6	2706.54	
Q5RJS8	Q5RJS8	TPST2_RAT	Tpst2	Protein-tyrosine sulfotransferase 2	1	VLCNKDPFTLK	VLC(UniMod:4)NKDPFTLK	3	VLC(UniMod:4)NKDPFTLK3	53001.1	85782.8	73367.9
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	VLCPAETHR	VLC(UniMod:4)PAETHR	2	VLC(UniMod:4)PAETHR2	3753.09		
Q99JD4	Q99JD4;F1LNQ9	CLAP2_RAT	Clasp2	CLIP-associating protein 2	0	VLCPIIQTADYPINLAAIK	VLC(UniMod:4)PIIQTADYPINLAAIK	3	VLC(UniMod:4)PIIQTADYPINLAAIK3	14591.5	28792.7	16881.6
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	VLCPINYPESPTR	VLC(UniMod:4)PINYPESPTR	2	VLC(UniMod:4)PINYPESPTR2	41457.2	35045.9	38139.9
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	VLCSASLTAV	VLC(UniMod:4)SASLTAV	2	VLC(UniMod:4)SASLTAV2	9230.79	6682.68	9670.84
Q5RJQ0	Q5RJQ0	CHST1_RAT	Chst1	Carbohydrate sulfotransferase 1	1	VLCSRPVCDPPGASDLILEEGDCVR	VLC(UniMod:4)SRPVC(UniMod:4)DPPGASDLILEEGDC(UniMod:4)VR	3	VLC(UniMod:4)SRPVC(UniMod:4)DPPGASDLILEEGDC(UniMod:4)VR3	1450.41	5378.85	2744.6
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	VLCSYDYR	VLC(UniMod:4)SYDYR	2	VLC(UniMod:4)SYDYR2	14962.2	18752.7	
Q53E76	Q53E76	GTDC1_RAT	Gtdc1	Glycosyltransferase-like domain-containing protein 1	1	VLCTADVVISTAK	VLC(UniMod:4)TADVVISTAK	2	VLC(UniMod:4)TADVVISTAK2		1964.83	1632.47
Q5RJS6	Q5RJS6	MSPD1_RAT	Mospd1	Motile sperm domain-containing protein 1	1	VLCTTPNK	VLC(UniMod:4)TTPNK	2	VLC(UniMod:4)TTPNK2	51229.8	50169.8	42513.3
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	VLDAESMHDCVSVVK	VLDAESMHDC(UniMod:4)VSVVK	3	VLDAESMHDC(UniMod:4)VSVVK3	26693	54837.3	37744.8
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	VLDALFPCVQGGTTAIPGAFGCGK	VLDALFPC(UniMod:4)VQGGTTAIPGAFGC(UniMod:4)GK	3	VLDALFPC(UniMod:4)VQGGTTAIPGAFGC(UniMod:4)GK3	55979.6	50491.7	68970.8
B0BNN3	B0BNN3	CAH1_RAT	Ca1	Carbonic anhydrase 1	1	VLDALSSVK	VLDALSSVK	2	VLDALSSVK2	15911.6	19489.6	17355
B0BNE3	B0BNE3	B0BNE3_RAT	Trappc5	Trafficking protein particle complex subunit 5	1	VLDALVAR	VLDALVAR	2	VLDALVAR2	112192	90816.8	96414.5
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VLDANDNSPVCER	VLDANDNSPVC(UniMod:4)ER	2	VLDANDNSPVC(UniMod:4)ER2	38136.3	58196.2	33182.8
O08679	O08679	MARK2_RAT	Mark2	Serine/threonine-protein kinase MARK2	1	VLDANSCQSELHER	VLDANSC(UniMod:4)QSELHER	2	VLDANSC(UniMod:4)QSELHER2	2406.57	1204.7	3168
O08679	O08679	MARK2_RAT	Mark2	Serine/threonine-protein kinase MARK2	1	VLDANSCQSELHER	VLDANSC(UniMod:4)QSELHER	3	VLDANSC(UniMod:4)QSELHER3	26677.7	23509.8	28812.8
P24329	P24329	THTR_RAT	Tst	Thiosulfate sulfurtransferase	1	VLDASWYSPGTR	VLDASWYSPGTR	2	VLDASWYSPGTR2	38249.7	25756.3	31235.9
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	VLDCFQGISYR	VLDC(UniMod:4)FQGISYR	2	VLDC(UniMod:4)FQGISYR2	6340.88	3897.44	4213.51
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	VLDDGELLVQQTK	VLDDGELLVQQTK	2	VLDDGELLVQQTK2	52293.7	39951.1	45881.6
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	VLDDGELLVQQTK	VLDDGELLVQQTK	3	VLDDGELLVQQTK3	7988.04	5171.57	8993.03
F1M171	F1M171	F1M171_RAT	Leg1	Similar to RIKEN cDNA 2310057J18	1	VLDDTDITPFIPDFTPLQNK	VLDDTDITPFIPDFTPLQNK	3	VLDDTDITPFIPDFTPLQNK3	53360.6	67575.5	64016.1
Q5EGY4	Q5EGY4	YKT6_RAT	Ykt6	Synaptobrevin homolog YKT6	1	VLDEFSK	VLDEFSK	2	VLDEFSK2	64658.9	66820.7	65084.1
Q6IFU8	Q6IFV1;Q6IFV3;Q63279;Q6IFW5;Q6IFU7;Q6IFU8	K1C17_RAT	Krt17	Keratin, type I cytoskeletal 17	0	VLDELTLAR	VLDELTLAR	2	VLDELTLAR2	53599.2	45557.6	41893.1
Q6IFW6	Q6IFW6	K1C10_RAT	Krt10	Keratin, type I cytoskeletal 10	1	VLDELTLSK	VLDELTLSK	2	VLDELTLSK2		21630.9	
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	VLDFDVK	VLDFDVK	2	VLDFDVK2	64327.1	54292	57595.1
Q64119	Q64119	MYL6_RAT	Myl6	Myosin light polypeptide 6	1	VLDFEHFLPMLQTVAK	VLDFEHFLPMLQTVAK	2	VLDFEHFLPMLQTVAK2	451073	457297	410879
Q64119	Q64119	MYL6_RAT	Myl6	Myosin light polypeptide 6	1	VLDFEHFLPMLQTVAK	VLDFEHFLPMLQTVAK	3	VLDFEHFLPMLQTVAK3	9.33053e+06	8.67619e+06	9.79104e+06
Q64119	Q64119	MYL6_RAT	Myl6	Myosin light polypeptide 6	1	VLDFEHFLPMLQTVAKNK	VLDFEHFLPMLQTVAKNK	3	VLDFEHFLPMLQTVAKNK3		4380.76	
Q64119	Q64119	MYL6_RAT	Myl6	Myosin light polypeptide 6	1	VLDFEHFLPMLQTVAKNK	VLDFEHFLPMLQTVAKNK	4	VLDFEHFLPMLQTVAKNK4	6963.44	9503.36	5946.3
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	VLDFQQNTNGIGQVSFSIHVPPTITELR	VLDFQQNTNGIGQVSFSIHVPPTITELR	4	VLDFQQNTNGIGQVSFSIHVPPTITELR4	685302	914200	717637
P35427	P35427	RL13A_RAT	Rpl13a	Large ribosomal subunit protein uL13	1	VLDGIPPPYDK	VLDGIPPPYDK	2	VLDGIPPPYDK2	26863.6	34407.2	35647.7
P06760	P06760	BGLR_RAT	Gusb	Beta-glucuronidase	1	VLDGLWSFR	VLDGLWSFR	2	VLDGLWSFR2	23634	27576.2	31349.9
F1LU71	F1LU71	AUHM_RAT	Auh	Methylglutaconyl-CoA hydratase, mitochondrial	1	VLDGQEAK	VLDGQEAK	2	VLDGQEAK2	60353.6	68689.4	
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	VLDIFEQR	VLDIFEQR	2	VLDIFEQR2	15949.6	12711.1	17888.1
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	VLDISIPASPEQIQR	VLDISIPASPEQIQR	2	VLDISIPASPEQIQR2	17927.8	21209	12610
Q6P799	Q6P799	SYSC_RAT	Sars1	Serine--tRNA ligase, cytoplasmic	1	VLDLDLFR	VLDLDLFR	2	VLDLDLFR2	67768.1	47871.8	27012
P57756	P57756	FCN2_RAT	Fcn2	Ficolin-2	1	VLDLEGSNK	VLDLEGSNK	2	VLDLEGSNK2	25846	29351.9	26599.8
A0A8I6A8L3	A0A8I6A8L3	A0A8I6A8L3_RAT	Dnpep	Aspartyl aminopeptidase	1	VLDLGSPQLAMHSIR	VLDLGSPQLAMHSIR	3	VLDLGSPQLAMHSIR3	23362.3	19308.7	33646.7
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	VLDLINK	VLDLINK	1	VLDLINK1	42307	27977.8	21306.9
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	VLDLINK	VLDLINK	2	VLDLINK2	9.75323e+06	9.71486e+06	1.02645e+07
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	VLDLPSLSSQDPAGPSLAMLPK	VLDLPSLSSQDPAGPSLAMLPK	3	VLDLPSLSSQDPAGPSLAMLPK3	228612	361809	249579
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	VLDLQADAR	VLDLQADAR	2	VLDLQADAR2	29101	32073.9	34057.4
Q63471	Q63471	BPIA2_RAT	Bpifa2	BPI fold-containing family A member 2	1	VLDLQAGLSSNGK	VLDLQAGLSSNGK	2	VLDLQAGLSSNGK2	8731.86	11827.9	8821.41
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	VLDLQQIK	VLDLQQIK	2	VLDLQQIK2	362354	343605	324733
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	VLDLSNFEILAK	VLDLSNFEILAK	2	VLDLSNFEILAK2	47968.7	37956.5	55803.3
O35462	O35462	ANGP2_RAT	Angpt2	Angiopoietin-2	1	VLDMEDK	VLDMEDK	2	VLDMEDK2	17304.2	17210.4	11385.6
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	VLDMTSVIR	VLDMTSVIR	2	VLDMTSVIR2	381620	358944	331094
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	VLDNAIETEK	VLDNAIETEK	2	VLDNAIETEK2	632364	654890	843388
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	VLDPAIPIPDPYSSR	VLDPAIPIPDPYSSR	2	VLDPAIPIPDPYSSR2	10739.8	11774.9	13978
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	VLDPFTIKPLDK	VLDPFTIKPLDK	2	VLDPFTIKPLDK2	12690.6	8414.43	12311
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	VLDPFTIKPLDK	VLDPFTIKPLDK	3	VLDPFTIKPLDK3	228121	207760	175944
P50137	P50137	TKT_RAT	Tkt	Transketolase	1	VLDPFTIKPLDKK	VLDPFTIKPLDKK	3	VLDPFTIKPLDKK3	45962.8	44532.2	32011.1
F7EWF8	F7EWF8	F7EWF8_RAT	Anapc2	Anaphase-promoting complex subunit 2	1	VLDPSMVILEVACEPIRR	VLDPSMVILEVAC(UniMod:4)EPIRR	3	VLDPSMVILEVAC(UniMod:4)EPIRR3	11915.7	17871.2	
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	VLDPYPSK	VLDPYPSK	2	VLDPYPSK2	60181	55645.9	68391.2
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	VLDQDTDAIAVHVVR	VLDQDTDAIAVHVVR	2	VLDQDTDAIAVHVVR2	7578.21	9951.25	8121.63
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	VLDQDTDAIAVHVVR	VLDQDTDAIAVHVVR	3	VLDQDTDAIAVHVVR3	146172	176339	162046
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	VLDQHPCVHPTASQQHGPMR	VLDQHPC(UniMod:4)VHPTASQQHGPMR	4	VLDQHPC(UniMod:4)VHPTASQQHGPMR4	5176.2	4576.48	
Q32KK0	Q32KK0	Q32KK0_RAT	Arsl	Arylsulfatase E	1	VLDQPVSLMDVFPTVVR	VLDQPVSLMDVFPTVVR	2	VLDQPVSLMDVFPTVVR2	4137.94	5372.79	8056.1
Q32KK0	Q32KK0	Q32KK0_RAT	Arsl	Arylsulfatase E	1	VLDQPVSLMDVFPTVVR	VLDQPVSLMDVFPTVVR	3	VLDQPVSLMDVFPTVVR3	9420.76		
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	VLDQVFYQR	VLDQVFYQR	2	VLDQVFYQR2	124031	140166	118772
Q68FT3	Q68FT3	PYRD2_RAT	Pyroxd2	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2	1	VLDQWFESEPLK	VLDQWFESEPLK	2	VLDQWFESEPLK2	18604.6	8432.65	18720.1
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	VLDSEGQLR	VLDSEGQLR	2	VLDSEGQLR2	363337	354647	395785
Q08834	Q08834	MGT5A_RAT	Mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	1	VLDSFGTEPEFNHASYAQSK	VLDSFGTEPEFNHASYAQSK	3	VLDSFGTEPEFNHASYAQSK3	41831	67220.8	44229.9
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	VLDSGAPIK	VLDSGAPIK	1	VLDSGAPIK1	8289.3		8512.04
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	VLDSGAPIK	VLDSGAPIK	2	VLDSGAPIK2	1.52559e+06	1.32982e+06	1.34321e+06
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	VLDSGAPIKIPVGPETLGR	VLDSGAPIKIPVGPETLGR	2	VLDSGAPIKIPVGPETLGR2	28948	24154	30073.6
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	VLDSGAPIKIPVGPETLGR	VLDSGAPIKIPVGPETLGR	3	VLDSGAPIKIPVGPETLGR3	1.37383e+06	1.41278e+06	1.50149e+06
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	VLDTPLSEGDEPTTLPAQR	VLDTPLSEGDEPTTLPAQR	3	VLDTPLSEGDEPTTLPAQR3	6906.7	15255.8	12160.8
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	VLDTSDALK	VLDTSDALK	2	VLDTSDALK2	40787	45935.6	35064.3
O88658	O88658;F1M4A4	KIF1B_RAT	Kif1b	Kinesin-like protein KIF1B	0	VLDTSVAYVR	VLDTSVAYVR	2	VLDTSVAYVR2	11559.2	11610.6	14869.5
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	VLDTTLK	VLDTTLK	1	VLDTTLK1	37634.8	21103	21242.9
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	VLDTTLK	VLDTTLK	2	VLDTTLK2	7.65931e+06	5.97815e+06	5.87425e+06
F1MAH6	F1MAH6	F1MAH6_RAT	Cdh11	Cadherin 11	1	VLDVNDNAPK	VLDVNDNAPK	2	VLDVNDNAPK2	40845.4	36537.3	41559
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	VLDWICR	VLDWIC(UniMod:4)R	2	VLDWIC(UniMod:4)R2	196611	190291	210225
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	VLDWVPK	VLDWVPK	2	VLDWVPK2	6166.25	8573.49	
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	VLDYDTSHIYTGHIYGEEGSFSHGSVVDGR	VLDYDTSHIYTGHIYGEEGSFSHGSVVDGR	4	VLDYDTSHIYTGHIYGEEGSFSHGSVVDGR4	4360.07	3640.36	5011.27
O35815	O35815	ATX3_RAT	Atxn3	Ataxin-3	1	VLEAADGPGMFDDDEDDLQR	VLEAADGPGMFDDDEDDLQR	3	VLEAADGPGMFDDDEDDLQR3	2957.28		
A0A8I5ZKU9	A0A8I5ZKU9	A0A8I5ZKU9_RAT	Shmt1	Serine hydroxymethyltransferase	1	VLEACSIACNK	VLEAC(UniMod:4)SIAC(UniMod:4)NK	2	VLEAC(UniMod:4)SIAC(UniMod:4)NK2	5719.03	4732.62	
D3ZVD8	D3ZVD8	D3ZVD8_RAT	Hdac6	Histone deacetylase 6	1	VLEAGMR	VLEAGMR	2	VLEAGMR2	85209.9	90667.9	96012.2
F1M8L9	F1M8L9	F1M8L9_RAT	Rapgef1	Rap guanine nucleotide exchange factor 1	1	VLEAILPLVQTDPR	VLEAILPLVQTDPR	2	VLEAILPLVQTDPR2	2496.49	6545.82	8206.56
Q5XHY7	Q5XHY7	STAM2_RAT	Stam2	Signal transducing adapter molecule 2	1	VLEALELYNK	VLEALELYNK	2	VLEALELYNK2	16740.1	20639.8	17170.8
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	VLEALLPLK	VLEALLPLK	2	VLEALLPLK2	43742.9	40632.3	32054.1
F1LTR1	F1LTR1	WDR26_RAT	Wdr26	WD repeat-containing protein 26	1	VLEALQVLR	VLEALQVLR	2	VLEALQVLR2	29956.9	30670.9	27095.7
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	VLEAMTER	VLEAMTER	2	VLEAMTER2	376620	416771	420096
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	VLEASIAENK	VLEASIAENK	2	VLEASIAENK2	27270.9	18584.7	21123
Q9WV63	Q9WV63	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	1	VLEDGKQQVQVVGLQER	VLEDGKQQVQVVGLQER	3	VLEDGKQQVQVVGLQER3	3434.01	4728.93	4922.53
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	VLEDGTLFWSGSK	VLEDGTLFWSGSK	2	VLEDGTLFWSGSK2	52355.3	58328	43236
P14740	P14740	DPP4_RAT	Dpp4	Dipeptidyl peptidase 4	1	VLEDNSALDK	VLEDNSALDK	2	VLEDNSALDK2	10770.3	13397.3	5925.96
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	VLEDQLTQILR	VLEDQLTQILR	2	VLEDQLTQILR2	5109.69	6388.6	5403.97
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	VLEDSDLK	VLEDSDLK	1	VLEDSDLK1	5552.49	1984.82	2019.79
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	VLEDSDLK	VLEDSDLK	2	VLEDSDLK2	1.22662e+06	1.06038e+06	1.0169e+06
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	VLEDSDLKK	VLEDSDLKK	2	VLEDSDLKK2	81399.1	47279.2	50387.1
A0A8I5Y8A9	A0A8I5Y8A9	A0A8I5Y8A9_RAT	Gltpd2	Glycolipid transfer protein domain containing 2	1	VLEDVYNR	VLEDVYNR	2	VLEDVYNR2	6526.19	5864	5255.14
Q64270	Q64270	EI2BA_RAT	Eif2b1	Translation initiation factor eIF-2B subunit alpha	1	VLEEAVAAK	VLEEAVAAK	2	VLEEAVAAK2		38557.4	36880.9
Q66H84	Q66H84	MAPK3_RAT	Mapkapk3	MAP kinase-activated protein kinase 3	1	VLEEDKDHWDDVK	VLEEDKDHWDDVK	3	VLEEDKDHWDDVK3	14385.5	6132.72	15682.6
Q66H84	Q66H84	MAPK3_RAT	Mapkapk3	MAP kinase-activated protein kinase 3	1	VLEEDKDHWDDVKEEMTSALATMR	VLEEDKDHWDDVKEEMTSALATMR	4	VLEEDKDHWDDVKEEMTSALATMR4	10025.9	5582.78	9989.44
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	VLEEEAGSSEVPETEAEETETR	VLEEEAGSSEVPETEAEETETR	3	VLEEEAGSSEVPETEAEETETR3	25628.8	33730.2	29308.4
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	VLEEEEQR	VLEEEEQR	2	VLEEEEQR2	998743	912933	1.0941e+06
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	VLEEEEQRR	VLEEEEQRR	3	VLEEEEQRR3	127137	97413.7	124375
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	VLEEEVK	VLEEEVK	2	VLEEEVK2	51663.2	49030.5	44973.1
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	VLEEEVKEFVK	VLEEEVKEFVK	3	VLEEEVKEFVK3	32704.2	26700.8	25341
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	VLEEGGFFEEK	VLEEGGFFEEK	2	VLEEGGFFEEK2	140811	139667	146332
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	VLEEHGEWWK	VLEEHGEWWK	2	VLEEHGEWWK2	85456.5	67233.8	90095
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	VLEEHGEWWK	VLEEHGEWWK	3	VLEEHGEWWK3	931121	963004	973683
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	VLEELGQR	VLEELGQR	2	VLEELGQR2	107451	109050	112959
Q792I0	Q792I0	LIN7C_RAT	Lin7c	Protein lin-7 homolog C	1	VLEEMESR	VLEEMESR	2	VLEEMESR2	103319	80067.4	94691.7
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	VLEENAQK	VLEENAQK	2	VLEENAQK2	18616.4	19429.7	19639.2
D3ZHZ3	D3ZHZ3	D3ZHZ3_RAT	Osbpl3	Oxysterol-binding protein	1	VLEENGVEHQPR	VLEENGVEHQPR	3	VLEENGVEHQPR3	17572.3	20068.5	19259.4
A0A8I6AAD8	A0A8I6AAD8	A0A8I6AAD8_RAT	Snx4	Sorting nexin 4	1	VLEEQINEGEQQLK	VLEEQINEGEQQLK	2	VLEEQINEGEQQLK2	6790.66	9762.37	8618.01
A0A8I6AAD8	A0A8I6AAD8	A0A8I6AAD8_RAT	Snx4	Sorting nexin 4	1	VLEEQINEGEQQLK	VLEEQINEGEQQLK	3	VLEEQINEGEQQLK3	2126.17	3143.71	7876.45
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	VLEEQLVK	VLEEQLVK	2	VLEEQLVK2	273646	234604	258599
O35274	O35274	NEB2_RAT	Ppp1r9b	Neurabin-2	1	VLEESELAR	VLEESELAR	2	VLEESELAR2	42319.4	57072.2	60550.2
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	VLEETNVSLGDK	VLEETNVSLGDK	2	VLEETNVSLGDK2	8899.73	8728.18	7960.51
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	VLEFGWPDLHTPALEK	VLEFGWPDLHTPALEK	3	VLEFGWPDLHTPALEK3	17400.9	17057.3	11137.5
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	VLEFIAVSQLR	VLEFIAVSQLR	2	VLEFIAVSQLR2	18415	22637.1	16942.5
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	VLEFNCR	VLEFNC(UniMod:4)R	2	VLEFNC(UniMod:4)R2	37646.3	33531.7	15276.9
Q4V7F2	Q4V7F2	CREL1_RAT	Creld1	Protein disulfide isomerase Creld1	1	VLEGFIK	VLEGFIK	2	VLEGFIK2	66459.6	56433.1	60015.7
D3ZQ80	D3ZQ80	D3ZQ80_RAT	Smg8	Nonsense-mediated mRNA decay factor SMG8	1	VLEGFLDIDTK	VLEGFLDIDTK	2	VLEGFLDIDTK2	8508.66	8811.41	5648.31
D3ZQ30	D3ZQ30	D3ZQ30_RAT	Telo2	Telomere length regulation protein TEL2 homolog	1	VLEGLVYR	VLEGLVYR	2	VLEGLVYR2	14718.4	25136.5	12660.8
P24368	P24368	PPIB_RAT	Ppib	Peptidyl-prolyl cis-trans isomerase B	1	VLEGMDVVR	VLEGMDVVR	2	VLEGMDVVR2	695332	627685	507010
P24368	P24368	PPIB_RAT	Ppib	Peptidyl-prolyl cis-trans isomerase B	1	VLEGMDVVRK	VLEGMDVVRK	3	VLEGMDVVRK3	18306.6	12331.4	19381.3
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	VLEGQPVSLTCVILAGRPLPER	VLEGQPVSLTC(UniMod:4)VILAGRPLPER	3	VLEGQPVSLTC(UniMod:4)VILAGRPLPER3	12611.1	27749	28069.8
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	VLEIELSSLK	VLEIELSSLK	2	VLEIELSSLK2	66226	63253.3	78543.7
D3ZE20	D3ZE20	D3ZE20_RAT	Nfatc1	Nuclear factor of activated T-cells 1	1	VLEIPLLPENNMR	VLEIPLLPENNMR	2	VLEIPLLPENNMR2	30012.3	32835.7	41577.5
F1LNT3	F1LNT3	F1LNT3_RAT	R3hdm1	R3H domain containing 1	1	VLEITELPDGITR	VLEITELPDGITR	2	VLEITELPDGITR2	6100.63	4032.4	
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	VLELDNVK	VLELDNVK	1	VLELDNVK1	3807.37	1335.62	2801.99
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	VLELDNVK	VLELDNVK	2	VLELDNVK2	726897	815046	764298
Q5FWY5	Q5FWY5	AIP_RAT	Aip	AH receptor-interacting protein	1	VLELDPALAPVVSR	VLELDPALAPVVSR	2	VLELDPALAPVVSR2	12325.1	10743.9	12933.8
Q4QQT4	Q4QQT4	2AAB_RAT	Ppp2r1b	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	1	VLELDSVK	VLELDSVK	2	VLELDSVK2	26050.1	16345.7	16474.3
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	VLELEDELQESR	VLELEDELQESR	2	VLELEDELQESR2	4096.03	4418.91	7060.64
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	VLELEGEK	VLELEGEK	2	VLELEGEK2	195420	221669	195505
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	VLELEGEKGEWGFK	VLELEGEKGEWGFK	3	VLELEGEKGEWGFK3	58830.7	55642.2	36641.3
G3V8Y8	G3V8Y8	G3V8Y8_RAT	Hip1	Huntingtin interacting protein 1	1	VLELENDLQK	VLELENDLQK	2	VLELENDLQK2	15377.7	13336.6	8570.83
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	VLELENEK	VLELENEK	2	VLELENEK2		18247.7	
Q9Z136	Q9Z136	TSC1_RAT	Tsc1	Hamartin	1	VLELESLLAK	VLELESLLAK	2	VLELESLLAK2	7465.45	15706.2	7779.89
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	VLELFDSFR	VLELFDSFR	2	VLELFDSFR2	11855.4	13003.8	5762.7
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	VLELICTR	VLELIC(UniMod:4)TR	2	VLELIC(UniMod:4)TR2	19839.6	18963.2	18380
Q66HC5	Q66HC5	NUP93_RAT	Nup93	Nuclear pore complex protein Nup93	1	VLELMNK	VLELMNK	2	VLELMNK2	17110.5		
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	VLELNKK	VLELNKK	2	VLELNKK2			6098.78
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	VLELQEVIDR	VLELQEVIDR	2	VLELQEVIDR2	113363	105649	114374
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	VLELQTELK	VLELQTELK	2	VLELQTELK2	33298.1	35433.6	29624.5
Q05030	Q05030	PGFRB_RAT	Pdgfrb	Platelet-derived growth factor receptor beta	1	VLELSESHPANGEQILR	VLELSESHPANGEQILR	3	VLELSESHPANGEQILR3	6059.28	10850.3	7506.48
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	VLELVSITANK	VLELVSITANK	2	VLELVSITANK2	54339.1	57056.7	59806.3
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	VLEMSMK	VLEMSMK	2	VLEMSMK2	46611.8	41656.7	42501.5
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	VLENAEGAR	VLENAEGAR	2	VLENAEGAR2	179664	135679	204494
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	VLENHAR	VLENHAR	2	VLENHAR2			30277.4
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	VLENIELNK	VLENIELNK	2	VLENIELNK2	50108.3	58543.3	46850.5
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	VLENIELNKK	VLENIELNKK	2	VLENIELNKK2	7316.07	6804.81	5019.47
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	VLENIELNKK	VLENIELNKK	3	VLENIELNKK3	110315	178456	136820
D3ZK09	D3ZK09	D3ZK09_RAT	Scyl3	SCY1 like pseudokinase 3	1	VLENPSSNVFPK	VLENPSSNVFPK	2	VLENPSSNVFPK2	18889	21477.3	17061
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	VLENVEHYK	VLENVEHYK	2	VLENVEHYK2	32123	26368	23187.7
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	VLEPEAAEEALENGPK	VLEPEAAEEALENGPK	2	VLEPEAAEEALENGPK2	28977.8	29167.3	31000.8
Q7TNY6	Q7TNY6	GCP60_RAT	Acbd3	Golgi resident protein GCP60	1	VLEPEAAEEALENGPK	VLEPEAAEEALENGPK	3	VLEPEAAEEALENGPK3	13298.2	8799.71	17482.3
D3ZTC4	D3ZTC4	D3ZTC4_RAT	Ccdc88b	Coiled-coil domain containing 88B	1	VLEPGPLPR	VLEPGPLPR	2	VLEPGPLPR2	38034.3	28021.1	33280.8
Q5FWS5	Q5FWS5	Q5FWS5_RAT	Loxl1	Lysyl oxidase homolog	1	VLEPPYLPVR	VLEPPYLPVR	2	VLEPPYLPVR2	200191	216130	213828
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	VLEPSLGAQGGTLELRPR	VLEPSLGAQGGTLELRPR	3	VLEPSLGAQGGTLELRPR3	281289	301571	294445
B4F766	B4F766	DYM_RAT	Dym	Dymeclin	1	VLEQATQSLR	VLEQATQSLR	2	VLEQATQSLR2	15238.6	11790.5	13559.9
B2GV38	B2GV38	UBL4A_RAT	Ubl4a	Ubiquitin-like protein 4A	1	VLEQLQR	VLEQLQR	2	VLEQLQR2	226363	254995	221226
P62914	P62914	RL11_RAT	Rpl11	Large ribosomal subunit protein uL5	1	VLEQLTGQTPVFSK	VLEQLTGQTPVFSK	2	VLEQLTGQTPVFSK2	21699.6	24686.2	34488.6
D4A7V9	D4A7V9	E2AK4_RAT	Eif2ak4	eIF-2-alpha kinase GCN2	1	VLESDLVDHVMQK	VLESDLVDHVMQK	3	VLESDLVDHVMQK3	5401.01	6344.05	
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	VLESDLVMNVYR	VLESDLVMNVYR	2	VLESDLVMNVYR2	12542.7	16830.3	24043.8
F1M8P2	F1M8P2	F1M8P2_RAT	Zyg11b	Zyg-11 family member B, cell cycle regulator	1	VLESFPTESSIQQK	VLESFPTESSIQQK	2	VLESFPTESSIQQK2	2729.77		
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	VLESNGSWR	VLESNGSWR	2	VLESNGSWR2	441387	469977	521499
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	VLESSIR	VLESSIR	2	VLESSIR2	11405.6	14048.1	
O88321	O88321	O88321_RAT	Psmd4	26S proteasome non-ATPase regulatory subunit 4	1	VLESTMVCVDNSEYMR	VLESTMVC(UniMod:4)VDNSEYMR	2	VLESTMVC(UniMod:4)VDNSEYMR2	38479.4	48380.9	48156.6
O88321	O88321	O88321_RAT	Psmd4	26S proteasome non-ATPase regulatory subunit 4	1	VLESTMVCVDNSEYMR	VLESTMVC(UniMod:4)VDNSEYMR	3	VLESTMVC(UniMod:4)VDNSEYMR3	3492.16	13080.2	6065.37
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	VLESVVADLLNR	VLESVVADLLNR	2	VLESVVADLLNR2	65900.3	33364.8	23814.9
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	VLESVVADLLNR	VLESVVADLLNR	3	VLESVVADLLNR3	6148.52	8015.52	5120.23
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	VLETAEDIQER	VLETAEDIQER	3	VLETAEDIQER3	40681.2	43145.6	48569.3
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	VLETAEEIQHR	VLETAEEIQHR	2	VLETAEEIQHR2	2131.19		2540.38
Q62833	Q62833	GRK5_RAT	Grk5	G protein-coupled receptor kinase 5	1	VLETEEVYSPK	VLETEEVYSPK	2	VLETEEVYSPK2	5646.61	8068.95	11493.5
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	VLETENNFEEGQEPSPTR	VLETENNFEEGQEPSPTR	3	VLETENNFEEGQEPSPTR3	12331.8	12753.2	9136.62
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	VLETHLR	VLETHLR	2	VLETHLR2	8566.63	6106.86	7589.56
F1LUG5	F1LUG5	F1LUG5_RAT	Tmem94	Transmembrane protein 94	1	VLETPVIDSIR	VLETPVIDSIR	2	VLETPVIDSIR2	6385.23		7339.21
P54777	P54777	PEX6_RAT	Pex6	Peroxisomal ATPase PEX6	1	VLETRPALQGLLGPGTR	VLETRPALQGLLGPGTR	3	VLETRPALQGLLGPGTR3	10508.4	2676.85	13131.8
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	VLETTVEIFNK	VLETTVEIFNK	2	VLETTVEIFNK2	34215	29874.6	33519.4
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	VLEVHAMAFCPPLR	VLEVHAMAFC(UniMod:4)PPLR	3	VLEVHAMAFC(UniMod:4)PPLR3	27257.4	34131.5	32729
F7EYK0	F7EYK0	F7EYK0_RAT	Fkbp5	peptidylprolyl isomerase	1	VLEVNPQNK	VLEVNPQNK	2	VLEVNPQNK2	44414.5	26756.9	37375.8
A0A0G2K4E8	A0A0G2K4E8	A0A0G2K4E8_RAT	R3hdm2	R3H domain containing 2	1	VLEVTDLPEGITR	VLEVTDLPEGITR	2	VLEVTDLPEGITR2	14677.8	9969	13311
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	VLEVTEEFGVHLAELTVDPQGALAIR	VLEVTEEFGVHLAELTVDPQGALAIR	3	VLEVTEEFGVHLAELTVDPQGALAIR3	9534.78	5338.13	
O35217	O35217	MINP1_RAT	Minpp1	Multiple inositol polyphosphate phosphatase 1	1	VLEYLNDLK	VLEYLNDLK	2	VLEYLNDLK2	63343.2	60537.9	60742.2
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	VLFALCSLLR	VLFALC(UniMod:4)SLLR	2	VLFALC(UniMod:4)SLLR2	8597.98	8998.13	6253.69
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	VLFAPVR	VLFAPVR	2	VLFAPVR2	363444	398036	416431
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	VLFASEEIPASPFR	VLFASEEIPASPFR	2	VLFASEEIPASPFR2	7556.04	6382.38	16555.4
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VLFDGDAHILMSIPSSFR	VLFDGDAHILMSIPSSFR	3	VLFDGDAHILMSIPSSFR3	1.39492e+06	1.34585e+06	1.39272e+06
Q32Q06	Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	1	VLFDNTGR	VLFDNTGR	2	VLFDNTGR2	302046	260931	281371
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	VLFEMQK	VLFEMQK	2	VLFEMQK2	21181.3	28900.7	23043.5
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	VLFEYMMGR	VLFEYMMGR	2	VLFEYMMGR2	14091.6	6190.51	5643.54
Q641Y2	Q641Y2	NDUS2_RAT	Ndufs2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	1	VLFGEITR	VLFGEITR	2	VLFGEITR2	7167.6	5277.99	4679.88
Q32KJ9	Q32KJ9	ARSG_RAT	Arsg	Arylsulfatase G	1	VLFHPNSGAAGEYGALQTVR	VLFHPNSGAAGEYGALQTVR	3	VLFHPNSGAAGEYGALQTVR3	11905.2	23547	12188.7
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	VLFHTDLVNPR	VLFHTDLVNPR	2	VLFHTDLVNPR2	3127.55	3199.82	2679.95
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	VLFHTDLVNPR	VLFHTDLVNPR	3	VLFHTDLVNPR3	59271.3	40143.6	47000.1
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	VLFICTANVTDTIPEPLR	VLFIC(UniMod:4)TANVTDTIPEPLR	3	VLFIC(UniMod:4)TANVTDTIPEPLR3	3298.86	5484.45	
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	VLFICTANVTDTIPEPLRDR	VLFIC(UniMod:4)TANVTDTIPEPLRDR	3	VLFIC(UniMod:4)TANVTDTIPEPLRDR3	68836.3	91826.8	65895.3
D4A929	D4A929	WDR81_RAT	Wdr81	WD repeat-containing protein 81	1	VLFILFR	VLFILFR	2	VLFILFR2	6139.15	5639.68	
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	VLFKPGTIEVQELSLCFGGMADR	VLFKPGTIEVQELSLC(UniMod:4)FGGMADR	3	VLFKPGTIEVQELSLC(UniMod:4)FGGMADR3	10048.6	20142.5	15002.1
B0LT89	Q6V9V9;B0LT89;A0A8I6GBQ0	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	0	VLFLIPK	VLFLIPK	1	VLFLIPK1	26802.6	10370.5	21084
B0LT89	Q6V9V9;B0LT89;A0A8I6GBQ0	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	0	VLFLIPK	VLFLIPK	2	VLFLIPK2	635094	596704	644053
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	VLFLMTK	VLFLMTK	2	VLFLMTK2	10804.4	7611.86	12284.8
F7ETC0	F7ETC0	F7ETC0_RAT	Smpd1	Sphingomyelin phosphodiesterase	1	VLFLTDLHWDHDYLEGTDPNCADPLCCR	VLFLTDLHWDHDYLEGTDPNC(UniMod:4)ADPLC(UniMod:4)C(UniMod:4)R	4	VLFLTDLHWDHDYLEGTDPNC(UniMod:4)ADPLC(UniMod:4)C(UniMod:4)R4	14969.4	12552	17323.6
Q9JJ05	Q9JJ05	C1GLT_RAT	C1galt1	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1	1	VLFMSSEENK	VLFMSSEENK	2	VLFMSSEENK2	29277.2	18449.8	22040.5
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	VLFMTTAVDLVITEVQEPVR	VLFMTTAVDLVITEVQEPVR	3	VLFMTTAVDLVITEVQEPVR3	5005.05		
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	VLFNITFDSVK	VLFNITFDSVK	2	VLFNITFDSVK2	11227.7	12588.9	
A0A0G2K4S7	A0A0G2K4S7	A0A0G2K4S7_RAT	Usp45	Ubiquitin carboxyl-terminal hydrolase	1	VLFNQLCQK	VLFNQLC(UniMod:4)QK	2	VLFNQLC(UniMod:4)QK2	26736.9	22358.2	
D3ZES7	D3ZWP6;D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	0	VLFPGIEDHPVLR	VLFPGIEDHPVLR	2	VLFPGIEDHPVLR2	11400.7	7981.37	4341.17
D3ZES7	D3ZWP6;D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	0	VLFPGIEDHPVLR	VLFPGIEDHPVLR	3	VLFPGIEDHPVLR3	167053	151164	158004
P15205	P15205	MAP1B_RAT	Map1b	Microtubule-associated protein 1B	1	VLFPGNSTQYNILEGLEK	VLFPGNSTQYNILEGLEK	3	VLFPGNSTQYNILEGLEK3	2173.02	4547.91	
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	VLFPLLTK	VLFPLLTK	2	VLFPLLTK2	40612.3	37913.9	37233.3
B5DF51	B5DF51	EMC5_RAT	Mmgt1	ER membrane protein complex subunit 5	1	VLFRPSDATNSSNLDALSSNTSLK	VLFRPSDATNSSNLDALSSNTSLK	3	VLFRPSDATNSSNLDALSSNTSLK3	21188.1	20174.7	22305.3
F7ETC0	F7ETC0	F7ETC0_RAT	Smpd1	Sphingomyelin phosphodiesterase	1	VLFTALNYGLK	VLFTALNYGLK	2	VLFTALNYGLK2	15883.2	10372.4	2646.07
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	VLFVDTVGLPAPPSVIK	VLFVDTVGLPAPPSVIK	2	VLFVDTVGLPAPPSVIK2	28530	31793.4	33816.1
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	VLFVDTVGLPAPPSVIK	VLFVDTVGLPAPPSVIK	3	VLFVDTVGLPAPPSVIK3	20571.8	17590.7	21952
D4A6D9	D4A6D9	D4A6D9_RAT	Hs1bp3	HCLS1 binding protein 3	1	VLFVGESDIR	VLFVGESDIR	2	VLFVGESDIR2	28243.8	28687.2	21546
Q6AYB9	Q6AYB9	Q6AYB9_RAT	Prmt2	Protein arginine methyltransferase 2	1	VLFWDNAYEFNLSALK	VLFWDNAYEFNLSALK	2	VLFWDNAYEFNLSALK2	7077.7		
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	VLFYCHFPDLLLTQR	VLFYC(UniMod:4)HFPDLLLTQR	2	VLFYC(UniMod:4)HFPDLLLTQR2		5159.26	5419.17
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	VLFYCHFPDLLLTQR	VLFYC(UniMod:4)HFPDLLLTQR	3	VLFYC(UniMod:4)HFPDLLLTQR3	38205.6	44899	51186.1
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	VLFYEEELVR	VLFYEEELVR	2	VLFYEEELVR2	94317.9	100960	91642.7
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	VLFYEEELVRR	VLFYEEELVRR	3	VLFYEEELVRR3	55895.7	71242.2	56897.4
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	VLGAGSSGPAPATPSR	VLGAGSSGPAPATPSR	2	VLGAGSSGPAPATPSR2	10747	4657.96	7393.92
B0BNE3	B0BNE3	B0BNE3_RAT	Trappc5	Trafficking protein particle complex subunit 5	1	VLGALLFVK	VLGALLFVK	2	VLGALLFVK2	42638.2	36416.4	40572.9
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	VLGATLSPELIQK	VLGATLSPELIQK	2	VLGATLSPELIQK2	44689.9	36677.7	31499.9
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	VLGATLSPELIQK	VLGATLSPELIQK	3	VLGATLSPELIQK3	2208.64	1061.82	2031.04
P23928	P23928	CRYAB_RAT	Cryab	Alpha-crystallin B chain	1	VLGDVIEVHGK	VLGDVIEVHGK	3	VLGDVIEVHGK3	4394.63	1880.65	
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	VLGEAMTGISQNAK	VLGEAMTGISQNAK	2	VLGEAMTGISQNAK2	2.98827e+06	2.72101e+06	3.07128e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	VLGEAMTGISQNAK	VLGEAMTGISQNAK	3	VLGEAMTGISQNAK3	537069	559421	551482
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	VLGELWPLFGGHLTKPER	VLGELWPLFGGHLTKPER	3	VLGELWPLFGGHLTKPER3	22982.3	18846.1	14133.8
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	VLGELWPLFGGHLTKPER	VLGELWPLFGGHLTKPER	4	VLGELWPLFGGHLTKPER4	72638.1	72417.7	71217.7
Q5U303	Q5U303	TAB2_RAT	Tab2	TGF-beta-activated kinase 1 and MAP3K7-binding protein 2	1	VLGGNSAASPR	VLGGNSAASPR	2	VLGGNSAASPR2	14132.5	12630.9	12555.4
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	VLGGSFADQK	VLGGSFADQK	2	VLGGSFADQK2	246784	327546	277119
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	VLGHFEKPLFLELCR	VLGHFEKPLFLELC(UniMod:4)R	4	VLGHFEKPLFLELC(UniMod:4)R4	1309.45	4367.2	3961.67
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	VLGIAIAR	VLGIAIAR	2	VLGIAIAR2	58341.9	63613.5	43167.6
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	VLGIDYPATR	VLGIDYPATR	2	VLGIDYPATR2	1.67054e+06	1.61692e+06	1.55372e+06
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	VLGIEEAK	VLGIEEAK	2	VLGIEEAK2	98992.4	126612	112338
Q5XID7	Q5XID7	ARMX3_RAT	Armcx3	Armadillo repeat-containing X-linked protein 3	1	VLGIESHHDFQVR	VLGIESHHDFQVR	4	VLGIESHHDFQVR4	3938.47	1922.5	
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	VLGIGAEVAR	VLGIGAEVAR	2	VLGIGAEVAR2	139216	150131	142648
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	VLGIGSPASELNSSNINAHHDPFLR	VLGIGSPASELNSSNINAHHDPFLR	4	VLGIGSPASELNSSNINAHHDPFLR4	16817.5	15747.1	10275.5
D3ZTC4	D3ZTC4	D3ZTC4_RAT	Ccdc88b	Coiled-coil domain containing 88B	1	VLGIIAPSSR	VLGIIAPSSR	2	VLGIIAPSSR2	6115.07	6962.79	5395.65
F7EPH4	F7EPH4	F7EPH4_RAT	Ppa1	inorganic diphosphatase	1	VLGILAMIDEGETDWK	VLGILAMIDEGETDWK	2	VLGILAMIDEGETDWK2	2815.7	3838.63	7331.33
P86411	P86411	RGPA2_RAT	Ralgapa2	Ral GTPase-activating protein subunit alpha-2	1	VLGILGDVNNIQSPK	VLGILGDVNNIQSPK	2	VLGILGDVNNIQSPK2		957.847	
D3Z8X6	D3Z8X6	D3Z8X6_RAT	Dtx3l	E3 ubiquitin-protein ligase	1	VLGISNVITWNDIHHK	VLGISNVITWNDIHHK	4	VLGISNVITWNDIHHK4		4719.92	6791.24
Q8K3V3	Q8K3V3	AGRG1_RAT	Adgrg1	Adhesion G-protein coupled receptor G1	1	VLGIVVQNTK	VLGIVVQNTK	2	VLGIVVQNTK2	51199.5	51071.9	52637.8
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	VLGIYTFTK	VLGIYTFTK	2	VLGIYTFTK2	67398.7	77599.8	85477.7
G3V785	G3V785	G3V785_RAT	Naa38	N(alpha)-acetyltransferase 38, NatC auxiliary subunit	1	VLGLAMVPGHHIVSIEVQR	VLGLAMVPGHHIVSIEVQR	4	VLGLAMVPGHHIVSIEVQR4	14370	11272.4	13539.1
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	VLGLESPLISSK	VLGLESPLISSK	2	VLGLESPLISSK2	10809.9	15110.1	8287.34
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	VLGLESPLISSKPQSHSMNTPGK	VLGLESPLISSKPQSHSMNTPGK	3	VLGLESPLISSKPQSHSMNTPGK3	15300.9	25620.7	12263.4
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	VLGLESPLISSKPQSHSMNTPGK	VLGLESPLISSKPQSHSMNTPGK	4	VLGLESPLISSKPQSHSMNTPGK4	62254.9	85231.3	91219.1
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	VLGLLGALDPYK	VLGLLGALDPYK	2	VLGLLGALDPYK2	29768.3	32405.6	35815.9
Q562A2	Q562A2	ZFR_RAT	Zfr	Zinc finger RNA-binding protein	1	VLGMDPLPQMNQR	VLGMDPLPQMNQR	2	VLGMDPLPQMNQR2	4019.93	1760.44	2418.07
Q9JIL3	Q9JIL3	ILF3_RAT	Ilf3	Interleukin enhancer-binding factor 3	1	VLGMDPLPSK	VLGMDPLPSK	2	VLGMDPLPSK2	13624.2	10478.9	21406.3
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	VLGMMAR	VLGMMAR	2	VLGMMAR2	15875.7	18258.8	15509.7
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	VLGNLQLNLLSK	VLGNLQLNLLSK	2	VLGNLQLNLLSK2	16123.5	12691.2	12115.4
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	VLGPAACR	VLGPAAC(UniMod:4)R	2	VLGPAAC(UniMod:4)R2	77078.3	83752.3	63258.1
P09456	P09456	KAP0_RAT	Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit	1	VLGPCSDILK	VLGPC(UniMod:4)SDILK	2	VLGPC(UniMod:4)SDILK2	207903	165574	160414
P09456	P09456	KAP0_RAT	Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit	1	VLGPCSDILKR	VLGPC(UniMod:4)SDILKR	2	VLGPC(UniMod:4)SDILKR2	10808.8	4265.96	9773.07
P09456	P09456	KAP0_RAT	Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit	1	VLGPCSDILKR	VLGPC(UniMod:4)SDILKR	3	VLGPC(UniMod:4)SDILKR3	131206	148222	141934
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	VLGPDGDANLK	VLGPDGDANLK	2	VLGPDGDANLK2	2.03708e+07	1.58381e+07	1.48406e+07
D3Z841	D3Z841	D3Z841_RAT	Btnl10	Butyrophilin like 10	1	VLGPPDPLLATVGQDKELPCK	VLGPPDPLLATVGQDKELPC(UniMod:4)K	3	VLGPPDPLLATVGQDKELPC(UniMod:4)K3	7480.45	6340.7	4815.79
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	VLGPSCK	VLGPSC(UniMod:4)K	2	VLGPSC(UniMod:4)K2	511345	604954	611305
P19814	P19814	TGON3_RAT	Ttgn1	Trans-Golgi network integral membrane protein TGN38	1	VLGPSSSENQEGTLTDSMK	VLGPSSSENQEGTLTDSMK	3	VLGPSSSENQEGTLTDSMK3	4841.27	9883.58	1500.31
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	VLGPYTFSICDTSNFSDYIR	VLGPYTFSIC(UniMod:4)DTSNFSDYIR	3	VLGPYTFSIC(UniMod:4)DTSNFSDYIR3	16129.8	7372.04	7264.4
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	VLGQGFGFAHPGMMQELQAR	VLGQGFGFAHPGMMQELQAR	3	VLGQGFGFAHPGMMQELQAR3	36143.5	27383.6	35588
D3Z8E0	Q63531;A0A8I6AQN6;D3Z8E0	D3Z8E0_RAT	Rps6ka3	Ribosomal protein S6 kinase	0	VLGQGSFGK	VLGQGSFGK	2	VLGQGSFGK2	18816	18305.5	24685.3
A0A8I6AQW7	A0A8I6AQW7	A0A8I6AQW7_RAT	Msi2	Musashi RNA-binding protein 2	1	VLGQPHHELDSK	VLGQPHHELDSK	3	VLGQPHHELDSK3	11056.5	17179.8	10747.9
P08650	P08650	CO5_RAT	C5	Complement C5	1	VLGQVNK	VLGQVNK	1	VLGQVNK1	9174.43	7546.38	3726.02
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	VLGQYLR	VLGQYLR	2	VLGQYLR2	207343	165936	208862
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	VLGQYSGPR	VLGQYSGPR	2	VLGQYSGPR2	184058	196269	203339
P0C5W1	P0C5W1	MAP1S_RAT	Map1s	Microtubule-associated protein 1S	1	VLGSGSLVSMQDEAFPACK	VLGSGSLVSMQDEAFPAC(UniMod:4)K	3	VLGSGSLVSMQDEAFPAC(UniMod:4)K3	6406.73	7630.97	4148.04
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	VLGTAFDPFLGGK	VLGTAFDPFLGGK	2	VLGTAFDPFLGGK2	93147.4	129940	123045
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	VLGTAQLK	VLGTAQLK	2	VLGTAQLK2	25122.7	35785.5	132956
F7FH41	F7FH41	F7FH41_RAT	Csnk2a2	Casein kinase 2 alpha 2	1	VLGTDDLYGYLK	VLGTDDLYGYLK	2	VLGTDDLYGYLK2	55212.5	63721.1	57863.2
F7FH41	F7FH41	F7FH41_RAT	Csnk2a2	Casein kinase 2 alpha 2	1	VLGTDDLYGYLKK	VLGTDDLYGYLKK	3	VLGTDDLYGYLKK3	11257.8	11448.1	
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	VLGTDHPDVAK	VLGTDHPDVAK	2	VLGTDHPDVAK2	2261.49	8167.24	3019.51
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	VLGTDHPDVAK	VLGTDHPDVAK	3	VLGTDHPDVAK3	94368.5	101225	106696
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	VLGTEDLYDYIDK	VLGTEDLYDYIDK	2	VLGTEDLYDYIDK2	19698.2	36935.1	23364.4
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	VLGTEDLYDYIDKYNIELDPR	VLGTEDLYDYIDKYNIELDPR	3	VLGTEDLYDYIDKYNIELDPR3	23399.2	16434.6	
D3ZSB7	A0A8I6A7D1;D3ZSB7	D3ZSB7_RAT	Rps6ka4	Ribosomal protein S6 kinase	0	VLGTGAYGK	VLGTGAYGK	2	VLGTGAYGK2	6724.02	10953.9	7333.01
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	VLGTPVETIELTEDR	VLGTPVETIELTEDR	2	VLGTPVETIELTEDR2	4868.4	6956.55	4251.13
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	VLGTPVETIELTEDRR	VLGTPVETIELTEDRR	3	VLGTPVETIELTEDRR3	86370.7	108943	105528
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	VLGTSPEAIDSAENR	VLGTSPEAIDSAENR	2	VLGTSPEAIDSAENR2	42902.8	41534.3	36406.3
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	VLGVFGELDLHGLPHSVYK	VLGVFGELDLHGLPHSVYK	3	VLGVFGELDLHGLPHSVYK3	43501.1	38200.1	39005.9
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	VLGVFGELDLHGLPHSVYK	VLGVFGELDLHGLPHSVYK	4	VLGVFGELDLHGLPHSVYK4	80934.7	89522.3	84108.5
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	VLGVQRPLLQSTIIVEK	VLGVQRPLLQSTIIVEK	3	VLGVQRPLLQSTIIVEK3	30493.6	37844.6	25933.3
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	VLGVSGSQNK	VLGVSGSQNK	2	VLGVSGSQNK2	187463	159611	164082
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	VLGWGGSYDDDTQLPQILEK	VLGWGGSYDDDTQLPQILEK	3	VLGWGGSYDDDTQLPQILEK3	82404.7	108238	96743.5
Q63691	Q63691	CD14_RAT	Cd14	Monocyte differentiation antigen CD14	1	VLGYSGLR	VLGYSGLR	2	VLGYSGLR2	35122.3	35608	31484.8
P97689	P97689	UT1_RAT	Slc14a1	Urea transporter 1	1	VLGYVTGDMK	VLGYVTGDMK	2	VLGYVTGDMK2	155924	147981	141634
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	VLHANFR	VLHANFR	2	VLHANFR2	542139	472272	385312
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	VLHAQCHSTPDSAEDVR	VLHAQC(UniMod:4)HSTPDSAEDVR	3	VLHAQC(UniMod:4)HSTPDSAEDVR3	28933.2	16431.3	25687.9
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	VLHAQCHSTPDSAEDVR	VLHAQC(UniMod:4)HSTPDSAEDVR	4	VLHAQC(UniMod:4)HSTPDSAEDVR4	95432.8	81894.6	87492.3
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	VLHAQCHSTPDSAEDVRK	VLHAQC(UniMod:4)HSTPDSAEDVRK	3	VLHAQC(UniMod:4)HSTPDSAEDVRK3	31698.4	52945.7	7920.87
P24090	P24090	FETUA_RAT	Ahsg	Alpha-2-HS-glycoprotein	1	VLHAQCHSTPDSAEDVRK	VLHAQC(UniMod:4)HSTPDSAEDVRK	4	VLHAQC(UniMod:4)HSTPDSAEDVRK4	168485	167308	97997.8
Q6AXR5	Q6AXR5	S35A3_RAT	Slc35a3	UDP-N-acetylglucosamine transporter	1	VLHDEILNKPMETLK	VLHDEILNKPMETLK	3	VLHDEILNKPMETLK3	29937.6	36491.4	23785.1
Q6AXR5	Q6AXR5	S35A3_RAT	Slc35a3	UDP-N-acetylglucosamine transporter	1	VLHDEILNKPMETLK	VLHDEILNKPMETLK	4	VLHDEILNKPMETLK4	33621.8	43400.6	54641.4
M0R907	M0R907	M0R907_RAT	Snrpd3	Small nuclear ribonucleoprotein Sm D3	1	VLHEAEGHIVTCETNTGEVYR	VLHEAEGHIVTC(UniMod:4)ETNTGEVYR	3	VLHEAEGHIVTC(UniMod:4)ETNTGEVYR3	9516.47		
M0R907	M0R907	M0R907_RAT	Snrpd3	Small nuclear ribonucleoprotein Sm D3	1	VLHEAEGHIVTCETNTGEVYR	VLHEAEGHIVTC(UniMod:4)ETNTGEVYR	4	VLHEAEGHIVTC(UniMod:4)ETNTGEVYR4	10481.7		
D4A4W6	D4A4W6	D4A4W6_RAT	Slirp	SRA stem-loop interacting RNA binding protein	1	VLHGAQTSDEEKDF	VLHGAQTSDEEKDF	3	VLHGAQTSDEEKDF3	4471.97	4358.77	
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	VLHGEQYLELYKPLPR	VLHGEQYLELYKPLPR	3	VLHGEQYLELYKPLPR3	9895.46	5806.74	20581.4
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	VLHGEQYLELYKPLPR	VLHGEQYLELYKPLPR	4	VLHGEQYLELYKPLPR4	14292.4	20832.1	30654
A0A8I5ZQB2	A0A8I5ZQB2	A0A8I5ZQB2_RAT	Hacd1	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase	1	VLHGEVIVEKDD	VLHGEVIVEKDD	3	VLHGEVIVEKDD3	13663.2	15953.1	9393.06
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	VLHGTINSGFK	VLHGTINSGFK	2	VLHGTINSGFK2	127881	130556	150567
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	VLHGTINSGFK	VLHGTINSGFK	3	VLHGTINSGFK3	143463	196283	155578
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	VLHGTINSGFKHTYK	VLHGTINSGFKHTYK	4	VLHGTINSGFKHTYK4	9744.52	10107	
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	VLHHCSSSMDVTR	VLHHC(UniMod:4)SSSMDVTR	2	VLHHC(UniMod:4)SSSMDVTR2	6433.97	9068.92	4494.94
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	VLHHCSSSMDVTR	VLHHC(UniMod:4)SSSMDVTR	3	VLHHC(UniMod:4)SSSMDVTR3	15544.2	7601.45	15913.8
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	VLHHCSSSMDVTR	VLHHC(UniMod:4)SSSMDVTR	4	VLHHC(UniMod:4)SSSMDVTR4	33205.6	24474.9	31531.1
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	VLHMDQNPYYGGESASITPLEDLYK	VLHMDQNPYYGGESASITPLEDLYK	3	VLHMDQNPYYGGESASITPLEDLYK3	43689.1	33123.6	37018
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	VLHMDQNPYYGGESASITPLEDLYKR	VLHMDQNPYYGGESASITPLEDLYKR	4	VLHMDQNPYYGGESASITPLEDLYKR4	15267	25108.3	22781.3
A0A8I6AQI7	A0A8I6AQI7	A0A8I6AQI7_RAT	Serpinf2	Serpin family F member 2	1	VLHMNMGSCIPHLLSHFCQNLNPGTIR	VLHMNMGSC(UniMod:4)IPHLLSHFC(UniMod:4)QNLNPGTIR	4	VLHMNMGSC(UniMod:4)IPHLLSHFC(UniMod:4)QNLNPGTIR4	134500	120550	104211
G3V6K3	G3V6K3	G3V6K3_RAT	Exosc7	Exosome component 7	1	VLHMSLQSLLHK	VLHMSLQSLLHK	3	VLHMSLQSLLHK3	1384.02		
Q68FS1	Q68FS1	NUBP2_RAT	Nubp2	Cytosolic Fe-S cluster assembly factor NUBP2	1	VLHQMPALCS	VLHQMPALC(UniMod:4)S	2	VLHQMPALC(UniMod:4)S2	14989.5	8412.19	17091.5
A0A8I6AA08	A0A8I6AA08	A0A8I6AA08_RAT	Septin6	Septin	1	VLHSYHDSR	VLHSYHDSR	2	VLHSYHDSR2			1447.47
A0A8I6AJ06	A0A8I6AJ06	A0A8I6AJ06_RAT	Ubl7	Ubiquitin-like 7	1	VLHTALHSSSSYR	VLHTALHSSSSYR	3	VLHTALHSSSSYR3	2124.82	1932.93	5338.71
P37727	P37727;A0A8I6AAJ7	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	0	VLHVDSR	VLHVDSR	2	VLHVDSR2	31458.6	33766.5	44130.8
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	VLHVFYDLFPGFLVK	VLHVFYDLFPGFLVK	2	VLHVFYDLFPGFLVK2	3566.72	6977.03	
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	VLHVFYDLFPGFLVK	VLHVFYDLFPGFLVK	3	VLHVFYDLFPGFLVK3	50750.9	27714.6	32531.5
F1LT49	F1LT49	F1LT49_RAT	Lrrc47	Leucine rich repeat containing 47	1	VLHVSENPTPLTVR	VLHVSENPTPLTVR	2	VLHVSENPTPLTVR2	1959.62	3541.96	1885.68
F1LT49	F1LT49	F1LT49_RAT	Lrrc47	Leucine rich repeat containing 47	1	VLHVSENPTPLTVR	VLHVSENPTPLTVR	3	VLHVSENPTPLTVR3	40715.9	56229.5	58490.1
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	VLHVVQTLYPFSSVTEEELSFEK	VLHVVQTLYPFSSVTEEELSFEK	3	VLHVVQTLYPFSSVTEEELSFEK3	12043.9	8469.99	9827.15
Q63483	Q63483	Q63483_RAT	Rab38	Ras-related protein Rab	1	VLHWDPETVVR	VLHWDPETVVR	2	VLHWDPETVVR2	17520.7	11623.8	18491.8
Q63483	Q63483	Q63483_RAT	Rab38	Ras-related protein Rab	1	VLHWDPETVVR	VLHWDPETVVR	3	VLHWDPETVVR3	133032	123674	116398
D3ZJI7	D3ZJI7	D3ZJI7_RAT	Serpinb11	Serpin family B member 11	1	VLHYDNFSGFLK	VLHYDNFSGFLK	3	VLHYDNFSGFLK3	21348.9	18408.8	18641.6
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	VLHYGDLEESPQGEVPHDSLQDK	VLHYGDLEESPQGEVPHDSLQDK	3	VLHYGDLEESPQGEVPHDSLQDK3	2877.49	5975.01	
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	VLHYGDLEESPQGEVPHDSLQDK	VLHYGDLEESPQGEVPHDSLQDK	4	VLHYGDLEESPQGEVPHDSLQDK4	7539.03	12520.6	8311.15
D3ZY46	D3ZY46	D3ZY46_RAT	Elmo1	Engulfment and cell motility 1	1	VLHYGDLEESPQGEVPHDSLQDKLPVADIK	VLHYGDLEESPQGEVPHDSLQDKLPVADIK	4	VLHYGDLEESPQGEVPHDSLQDKLPVADIK4	12160.1	7118.75	8068.44
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	VLHYLAMQKPADLAR	VLHYLAMQKPADLAR	3	VLHYLAMQKPADLAR3	17700.2	30951.6	21976.1
P69735	P69735	RB3GP_RAT	Rab3gap1	Rab3 GTPase-activating protein catalytic subunit	1	VLHYLAMQKPADLAR	VLHYLAMQKPADLAR	4	VLHYLAMQKPADLAR4	32343	37503.9	37928.3
P25113	P16290;P25113	PGAM1_RAT	Pgam1	Phosphoglycerate mutase 1	0	VLIAAHGNSLR	VLIAAHGNSLR	2	VLIAAHGNSLR2	4290.91		1430.04
P25113	P16290;P25113	PGAM1_RAT	Pgam1	Phosphoglycerate mutase 1	0	VLIAAHGNSLR	VLIAAHGNSLR	3	VLIAAHGNSLR3	83905.1	64505	78453.6
B1H282	B1H282	B1H282_RAT	Colgalt1	Collagen beta(1-O)galactosyltransferase 1	1	VLIALLAR	VLIALLAR	2	VLIALLAR2	12753.4	5628.6	7690.52
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	VLIANNGIAAVK	VLIANNGIAAVK	2	VLIANNGIAAVK2	11682.1	6412.97	3759.57
M0R9W9	M0R9W9;A0A8I6AAA9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	0	VLIASNNK	VLIASNNK	2	VLIASNNK2	137889	119867	165157
A0A8I6AA52	A0A8I6AA52	A0A8I6AA52_RAT	Wdr48	WD repeat-containing protein 48	1	VLICEEK	VLIC(UniMod:4)EEK	2	VLIC(UniMod:4)EEK2	53120.6	43876.3	36112.4
Q5XIN7	Q5XIN7	PMGT1_RAT	Pomgnt1	Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1	1	VLICTVK	VLIC(UniMod:4)TVK	2	VLIC(UniMod:4)TVK2	11625.6	16158.8	17613.2
Q53UA7	Q53UA7	TAOK3_RAT	Taok3	Serine/threonine-protein kinase TAO3	1	VLIDLIQR	VLIDLIQR	2	VLIDLIQR2	416350	442917	402819
P20673	P20673	ARLY_RAT	Asl	Argininosuccinate lyase	1	VLIEAMVDR	VLIEAMVDR	2	VLIEAMVDR2	6168		2311.01
P01026	P01026	CO3_RAT	C3	Complement C3	1	VLIEDGSGEAVLSR	VLIEDGSGEAVLSR	2	VLIEDGSGEAVLSR2	232102	2.71374e+06	2.7426e+06
P01026	P01026	CO3_RAT	C3	Complement C3	1	VLIEDGSGEAVLSR	VLIEDGSGEAVLSR	3	VLIEDGSGEAVLSR3	110335	101638	80681.9
P01026	P01026	CO3_RAT	C3	Complement C3	1	VLIEDGSGEAVLSRK	VLIEDGSGEAVLSRK	3	VLIEDGSGEAVLSRK3	114046	103078	112249
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	VLIEFSLLR	VLIEFSLLR	2	VLIEFSLLR2	5786.16	5167.68	4040.07
B2RZ72	B2RZ72	B2RZ72_RAT	Arpc4	Actin-related protein 2/3 complex subunit 4	1	VLIEGSINSVR	VLIEGSINSVR	2	VLIEGSINSVR2	594018	565827	595235
Q6IRJ7	Q6IRJ7	Q6IRJ7_RAT	Anxa7	Annexin	1	VLIEILCTR	VLIEILC(UniMod:4)TR	2	VLIEILC(UniMod:4)TR2	58433.5	63535.4	38898.5
A0A096MKE0	A0A096MKE0	A0A096MKE0_RAT	Asph	Aspartate-beta-hydroxylase	1	VLIFDDSFEHEVWQDASSFR	VLIFDDSFEHEVWQDASSFR	3	VLIFDDSFEHEVWQDASSFR3		10238	
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	VLIFQEESEIPASVFVK	VLIFQEESEIPASVFVK	2	VLIFQEESEIPASVFVK2	1.57641e+06	1.49145e+06	1.07456e+06
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	VLIFQEESEIPASVFVK	VLIFQEESEIPASVFVK	3	VLIFQEESEIPASVFVK3	1.82757e+06	1.73226e+06	1.40959e+06
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	VLIFQEESEIPASVFVKEPVPSTAEGK	VLIFQEESEIPASVFVKEPVPSTAEGK	3	VLIFQEESEIPASVFVKEPVPSTAEGK3	149053	175872	216003
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	VLIFQEESEIPASVFVKEPVPSTAEGK	VLIFQEESEIPASVFVKEPVPSTAEGK	4	VLIFQEESEIPASVFVKEPVPSTAEGK4	31148.4	58623.9	48007.9
O70199	O70199	UGDH_RAT	Ugdh	UDP-glucose 6-dehydrogenase	1	VLIGGDETPEGQR	VLIGGDETPEGQR	2	VLIGGDETPEGQR2	5498.91	1584.89	2260.12
Q9QYP1	Q9QYP1	LRP4_RAT	Lrp4	Low-density lipoprotein receptor-related protein 4	1	VLIGSQLPHPFGLTLYGQR	VLIGSQLPHPFGLTLYGQR	3	VLIGSQLPHPFGLTLYGQR3	1816.36	8935.11	
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	VLIIDNLCLTPASK	VLIIDNLC(UniMod:4)LTPASK	2	VLIIDNLC(UniMod:4)LTPASK2	5926.94	5865.12	
Q99MI5	Q99MI5	Q99MI5_RAT	Srm	Spermidine synthase	1	VLIIGGGDGGVLR	VLIIGGGDGGVLR	2	VLIIGGGDGGVLR2	44871.6	31381.2	43935.4
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	VLIISNNK	VLIISNNK	2	VLIISNNK2	54358	55417.4	61906.2
D3ZCD0	D3ZCD0	D3ZCD0_RAT	Tek	receptor protein-tyrosine kinase	1	VLIKEEDAVIYK	VLIKEEDAVIYK	3	VLIKEEDAVIYK3		10402.3	11493.3
P36372	P36372	TAP2_RAT	Tap2	Antigen peptide transporter 2	1	VLILDEATSALDAECEQALQTWR	VLILDEATSALDAEC(UniMod:4)EQALQTWR	3	VLILDEATSALDAEC(UniMod:4)EQALQTWR3	2328.87	4184.9	
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	VLILDQLLNSIK	VLILDQLLNSIK	2	VLILDQLLNSIK2	29240.3	4905.4	4629.96
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	VLIMDHPSMR	VLIMDHPSMR	2	VLIMDHPSMR2	60227	33162	31930.1
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	VLIMDHPSMR	VLIMDHPSMR	3	VLIMDHPSMR3	859850	800981	968885
A0A0G2JUG7	A0A0G2JUG7	IQEC1_RAT	Iqsec1	IQ motif and SEC7 domain-containing protein 1	1	VLINFNAPNPQDR	VLINFNAPNPQDR	2	VLINFNAPNPQDR2		3851.04	
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	VLIPIHEANR	VLIPIHEANR	3	VLIPIHEANR3	111452	88182.5	120430
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	VLIPPAWNK	VLIPPAWNK	2	VLIPPAWNK2	9419.36		9817.37
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	VLIPTTR	VLIPTTR	2	VLIPTTR2	138530	143707	162521
P0DSP1	P0DSP1	SORL_RAT	Sorl1	Sortilin-related receptor	1	VLIPYQGPSSDYVVVK	VLIPYQGPSSDYVVVK	2	VLIPYQGPSSDYVVVK2	3044.7	3554.5	
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	VLIQEMDLR	VLIQEMDLR	2	VLIQEMDLR2	62665.8	69009.9	78035.5
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	VLISDLKPSTSYK	VLISDLKPSTSYK	2	VLISDLKPSTSYK2	18975.5	19698.8	21754.6
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	VLISDLKPSTSYK	VLISDLKPSTSYK	3	VLISDLKPSTSYK3	740396	864312	682204
Q5XIP2	Q5XIP2	Q5XIP2_RAT	Pigk	GPI-anchor transamidase	1	VLITDFFGSVR	VLITDFFGSVR	2	VLITDFFGSVR2	6128.42	9172.45	6784.36
Q68HB8	Q68HB8	Q68HB8_RAT	Pcdh7	Protocadherin 7	1	VLITDVNDNSPR	VLITDVNDNSPR	2	VLITDVNDNSPR2	21615.6	19183.4	14344.7
Q5U2R0	Q5U2R0	MAT2B_RAT	Mat2b	Methionine adenosyltransferase 2 subunit beta	1	VLITGATGLLGR	VLITGATGLLGR	2	VLITGATGLLGR2	13384.1	11551.5	22306.1
Q5RKI1	Q5RKI1;A0A8I6GF11;Q6P3V8	IF4A2_RAT	Eif4a2	Eukaryotic initiation factor 4A-II	0	VLITTDLLAR	VLITTDLLAR	2	VLITTDLLAR2	26115.8	24150.5	28459.6
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	VLIVEPEGIK	VLIVEPEGIK	2	VLIVEPEGIK2	509065	384469	299136
P14046	Q6IE52;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	VLIVEPEGIKK	VLIVEPEGIKK	2	VLIVEPEGIKK2	7.10705e+06	5.07964e+06	4.48472e+06
P14046	Q6IE52;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	VLIVEPEGIKK	VLIVEPEGIKK	3	VLIVEPEGIKK3	247704	215111	199176
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	VLIVEPEGIKR	VLIVEPEGIKR	2	VLIVEPEGIKR2	703744	368591	318865
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	VLIVEPEGIKR	VLIVEPEGIKR	3	VLIVEPEGIKR3	8.55791e+06	6.46852e+06	6.6646e+06
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	VLIVSEDPELPYMRPPLSK	VLIVSEDPELPYMRPPLSK	3	VLIVSEDPELPYMRPPLSK3	92632.8	87921.4	113544
A0A096MK24	A0A096MK24	A0A096MK24_RAT	Morc4	Microrchidia 4	1	VLIWNIR	VLIWNIR	2	VLIWNIR2	12150.3	11203.2	15328.3
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	VLIYSVQPYTK	VLIYSVQPYTK	2	VLIYSVQPYTK2	26881.5	37886.7	25589
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	VLKDNEVMDTFQIECLK	VLKDNEVMDTFQIEC(UniMod:4)LK	3	VLKDNEVMDTFQIEC(UniMod:4)LK3	31566.9	25589.9	28492.3
A0A0G2JXI6	A0A0G2JXI6	A0A0G2JXI6_RAT	Cyrib	CYFIP related Rac1 interactor B	1	VLKDQPPNSVEGLLNALR	VLKDQPPNSVEGLLNALR	3	VLKDQPPNSVEGLLNALR3	7783.48	9110.52	11788.3
Q3KRD5	Q3KRD5	TOM34_RAT	Tomm34	Mitochondrial import receptor subunit TOM34	1	VLKEEGNELVK	VLKEEGNELVK	3	VLKEEGNELVK3	4585.73	19338.3	
B0BN65	B0BN65	B0BN65_RAT	Cyria	CYFIP related Rac1 interactor A	1	VLKEQAPDSVEGLLNALR	VLKEQAPDSVEGLLNALR	3	VLKEQAPDSVEGLLNALR3	4276.87	5595.7	2721.89
D4A2W1	D4A2W1	D4A2W1_RAT	Enpp4	Ectonucleotide pyrophosphatase/phosphodiesterase 4	1	VLKEVDGLIGDLVQK	VLKEVDGLIGDLVQK	3	VLKEVDGLIGDLVQK3		4254.84	3802.96
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	VLKMMEVPYVDR	VLKMMEVPYVDR	3	VLKMMEVPYVDR3	14041.4	12090.5	2894.6
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	VLKMMEVPYVDRNTCR	VLKMMEVPYVDRNTC(UniMod:4)R	4	VLKMMEVPYVDRNTC(UniMod:4)R4		22923.4	10689.3
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	VLLAAAVCTK	VLLAAAVC(UniMod:4)TK	2	VLLAAAVC(UniMod:4)TK2	235746	219125	200002
P09215	P09215	KPCD_RAT	Prkcd	Protein kinase C delta type	1	VLLAELK	VLLAELK	2	VLLAELK2	55634.7	61361	54637.4
Q5FWS5	Q5FWS5	Q5FWS5_RAT	Loxl1	Lysyl oxidase homolog	1	VLLAGAPQTSQR	VLLAGAPQTSQR	2	VLLAGAPQTSQR2	28371.9	29062.1	27349.9
A0A8I5Y1D5	A0A8I5Y1D5	A0A8I5Y1D5_RAT	Mtmr1	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	VLLAGAVR	VLLAGAVR	2	VLLAGAVR2	34346.3	28831.2	19843.9
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	VLLAPLGDDFR	VLLAPLGDDFR	2	VLLAPLGDDFR2	51304.5	44426	36153.5
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	VLLATLSIPITPER	VLLATLSIPITPER	2	VLLATLSIPITPER2	224539	219485	190896
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	VLLATLSIPITPER	VLLATLSIPITPER	3	VLLATLSIPITPER3	20391.3	19526.7	18573.3
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	VLLAVFVEQPTPFLPR	VLLAVFVEQPTPFLPR	2	VLLAVFVEQPTPFLPR2	2628.07	5423.3	6541.74
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	VLLAVFVEQPTPFLPR	VLLAVFVEQPTPFLPR	3	VLLAVFVEQPTPFLPR3	8139.13	4557.08	4222.71
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	VLLCGLQGLGAEVAK	VLLC(UniMod:4)GLQGLGAEVAK	2	VLLC(UniMod:4)GLQGLGAEVAK2	33072.1	25413.5	42230.2
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	VLLCGLQGLGAEVAK	VLLC(UniMod:4)GLQGLGAEVAK	3	VLLC(UniMod:4)GLQGLGAEVAK3	5625.6	6004.37	3005.05
G3V784	G3V784	G3V784_RAT	Adpgk	ADP-dependent glucokinase	1	VLLCGPIGPK	VLLC(UniMod:4)GPIGPK	2	VLLC(UniMod:4)GPIGPK2	94691.7	67189.5	73070.6
A0A8I5ZYN9	A0A8I5ZYN9	A0A8I5ZYN9_RAT	Ipo11-ps1	Similar to importin 11	1	VLLDFLDQHPISFTPLIQR	VLLDFLDQHPISFTPLIQR	3	VLLDFLDQHPISFTPLIQR3	5095.24	4438.3	7613.82
B2RYP8	B2RYP8	B2RYP8_RAT	Tubgcp2	Gamma-tubulin complex component	1	VLLDFLMEEK	VLLDFLMEEK	2	VLLDFLMEEK2	3582.13	6203.88	5459.28
A0A8I6ACU9	A0A8I6ACU9	A0A8I6ACU9_RAT	Timm50	Mitochondrial import inner membrane translocase subunit TIM50	1	VLLDLSAFLK	VLLDLSAFLK	2	VLLDLSAFLK2	225185	185777	205202
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	VLLDNVENK	VLLDNVENK	2	VLLDNVENK2	46526.4	45939.3	41749
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	VLLDWINDVLAEER	VLLDWINDVLAEER	2	VLLDWINDVLAEER2	125539	114755	102248
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	VLLDWINDVLAEER	VLLDWINDVLAEER	3	VLLDWINDVLAEER3	14949.3	18926.9	17515.9
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	VLLEAGEGLVTVTPTTGSDGRPDAR	VLLEAGEGLVTVTPTTGSDGRPDAR	3	VLLEAGEGLVTVTPTTGSDGRPDAR3	19444	22768.9	17198.8
B2GV38	B2GV38	UBL4A_RAT	Ubl4a	Ubiquitin-like protein 4A	1	VLLEEGSAHR	VLLEEGSAHR	2	VLLEEGSAHR2	24976.2	16413.6	26211.9
A0A8I5Y6U5	A0A8I5Y6U5	A0A8I5Y6U5_RAT	Srp14	Signal recognition particle 14 kDa protein	1	VLLESEQFLTELTR	VLLESEQFLTELTR	2	VLLESEQFLTELTR2	6086.48	5109.96	3787.53
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	VLLFSDGNSQGATAEAIEK	VLLFSDGNSQGATAEAIEK	2	VLLFSDGNSQGATAEAIEK2	8628.05	9576.07	7072.15
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	VLLFSDGNSQGATAEAIEK	VLLFSDGNSQGATAEAIEK	3	VLLFSDGNSQGATAEAIEK3	4500.09	3658.5	5923.21
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	VLLFTDDVALVSK	VLLFTDDVALVSK	2	VLLFTDDVALVSK2	14873.7	10769.9	8621.95
Q63186	Q63186	EI2BD_RAT	Eif2b4	Translation initiation factor eIF-2B subunit delta	1	VLLGAHALLANGSVMSR	VLLGAHALLANGSVMSR	3	VLLGAHALLANGSVMSR3	4591.29	3541.16	
P51111	P51111	HD_RAT	Htt	Huntingtin	1	VLLGEEEALEDDSESR	VLLGEEEALEDDSESR	2	VLLGEEEALEDDSESR2	8312.59	14837.5	11305.2
P51111	P51111	HD_RAT	Htt	Huntingtin	1	VLLGEEEALEDDSESR	VLLGEEEALEDDSESR	3	VLLGEEEALEDDSESR3	6609.89	6032.35	4141.71
Q68FU1	Q68FU1	PKHF1_RAT	Plekhf1	Pleckstrin homology domain-containing family F member 1	1	VLLGEGVLTK	VLLGEGVLTK	2	VLLGEGVLTK2	80880.3	87143.4	96872.8
P62282	P62282;A0A8I5Y1A5	RS11_RAT	Rps11	Small ribosomal subunit protein uS17	0	VLLGETGKEK	VLLGETGKEK	2	VLLGETGKEK2		15054.2	
O89035	O89035	DIC_RAT	Slc25a10	Mitochondrial dicarboxylate carrier	1	VLLGGISGLTGGFVGTPADLVNVR	VLLGGISGLTGGFVGTPADLVNVR	3	VLLGGISGLTGGFVGTPADLVNVR3	7766.28	7394.86	10142.3
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	VLLGGPGSFYWQGQLISDQVAEIISK	VLLGGPGSFYWQGQLISDQVAEIISK	3	VLLGGPGSFYWQGQLISDQVAEIISK3		6918.64	2485.52
Q8R4Z9	Q8R4Z9	MFN1_RAT	Mfn1	Mitofusin-1	1	VLLGLSEPIFQVPR	VLLGLSEPIFQVPR	2	VLLGLSEPIFQVPR2	4226.52	5049.42	
P97523	P97523	MET_RAT	Met	Hepatocyte growth factor receptor	1	VLLGNESCTLTLSESTTNTLK	VLLGNESC(UniMod:4)TLTLSESTTNTLK	3	VLLGNESC(UniMod:4)TLTLSESTTNTLK3			2702.02
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	VLLHLAADPYPDVSDLAMK	VLLHLAADPYPDVSDLAMK	3	VLLHLAADPYPDVSDLAMK3	5227.54	1873.55	4884.13
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	VLLISDPTTDK	VLLISDPTTDK	2	VLLISDPTTDK2	50104.9	45265.8	30829.4
D3ZXA5	D3ZXA5	D3ZXA5_RAT	Tirap	Toll/interleukin-1 receptor domain-containing adapter protein	1	VLLITPGFLR	VLLITPGFLR	2	VLLITPGFLR2	5070.57	6060.81	9268.01
Q32Q05	Q32Q05	OTU1_RAT	Yod1	Ubiquitin thioesterase OTU1	1	VLLIYDGIHYDPLQR	VLLIYDGIHYDPLQR	3	VLLIYDGIHYDPLQR3	3023.97	6745.9	6871.57
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	VLLLASR	VLLLASR	2	VLLLASR2	7.01457e+06	6.48227e+06	7.45582e+06
Q4V8B2	Q4V8B2	DCNL3_RAT	Dcun1d3	DCN1-like protein 3	1	VLLLAWK	VLLLAWK	2	VLLLAWK2	6266.15	4635.65	5828.51
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	VLLLEANR	VLLLEANR	2	VLLLEANR2	252866	278333	267580
A0A8I5ZTW6	A0A8I5ZTW6	A0A8I5ZTW6_RAT	Gopc	Golgi associated PDZ and coiled-coil motif containing	1	VLLLKEDHEGLGISITGGK	VLLLKEDHEGLGISITGGK	4	VLLLKEDHEGLGISITGGK4	5269.72	4784.1	4543.63
M0RDU0	M0RDU0	HAP40_RAT	F8a1	40-kDa huntingtin-associated protein	1	VLLLLLLQPPPAK	VLLLLLLQPPPAK	2	VLLLLLLQPPPAK2	7023.02	4271.78	6285.12
G3V8E2	G3V8E2;A0A8I6G7M4	G3V8E2_RAT	Strip1	Striatin interacting protein 1	0	VLLLLWK	VLLLLWK	2	VLLLLWK2	39741.8	39459.1	41994.4
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	VLLLSQDYGK	VLLLSQDYGK	2	VLLLSQDYGK2	588210	711810	599284
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	VLLLVDDEYK	VLLLVDDEYK	2	VLLLVDDEYK2	111936	100931	119297
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	VLLMDKETTGIVSMVYTQSEILQK	VLLMDKETTGIVSMVYTQSEILQK	3	VLLMDKETTGIVSMVYTQSEILQK3	7220.99		5826.33
Q63616	Q63616	VP33B_RAT	Vps33b	Vacuolar protein sorting-associated protein 33B	1	VLLNAEDK	VLLNAEDK	2	VLLNAEDK2	31928.6	31052.3	29179.1
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	VLLNDGGYYDPETGVFTAPLAGR	VLLNDGGYYDPETGVFTAPLAGR	3	VLLNDGGYYDPETGVFTAPLAGR3	113169	121364	116159
Q5FVH0	Q5FVH0	C1QT5_RAT	C1qtnf5	Complement C1q tumor necrosis factor-related protein 5	1	VLLNEQGHYDATTGK	VLLNEQGHYDATTGK	2	VLLNEQGHYDATTGK2	3347.16		
Q5FVH0	Q5FVH0	C1QT5_RAT	C1qtnf5	Complement C1q tumor necrosis factor-related protein 5	1	VLLNEQGHYDATTGK	VLLNEQGHYDATTGK	3	VLLNEQGHYDATTGK3	96598.7	67948.2	75211.1
A0A0G2JUU7	A0A0G2JUU7	A0A0G2JUU7_RAT	Tubgcp3	Gamma-tubulin complex component	1	VLLNQLR	VLLNQLR	2	VLLNQLR2	15207.3	29294.9	11381.4
P26772	A0A8I6A3Z7;P26772	CH10_RAT	Hspe1	10 kDa heat shock protein, mitochondrial	0	VLLPEYGGTK	VLLPEYGGTK	2	VLLPEYGGTK2	1.36878e+06	1.34255e+06	1.39634e+06
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	VLLPPDVLHWEADTIPIPR	VLLPPDVLHWEADTIPIPR	3	VLLPPDVLHWEADTIPIPR3	12993.8	15424.7	13754.2
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	VLLPVWEAEGLGLR	VLLPVWEAEGLGLR	2	VLLPVWEAEGLGLR2	14753.8	27541.3	25658
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	VLLPVWEAEGLGLR	VLLPVWEAEGLGLR	3	VLLPVWEAEGLGLR3	5055.39	8327.59	6821.76
A0A0U1RRU5	A0A0U1RRU5	A0A0U1RRU5_RAT	Tab1	TGF-beta activated kinase 1/MAP3K7 binding protein 1	1	VLLQAFDVVER	VLLQAFDVVER	2	VLLQAFDVVER2	14064.7	19296.2	9365.56
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	VLLQHVHEGYEK	VLLQHVHEGYEK	3	VLLQHVHEGYEK3	114131	66159.6	59971.8
D3ZSM9	D3ZSM9	D3ZSM9_RAT	Brat1	BRCA1-associated ATM activator 1	1	VLLQPLACILK	VLLQPLAC(UniMod:4)ILK	2	VLLQPLAC(UniMod:4)ILK2	6059.44	6401.09	5226.89
F1LR42	F1LR42	F1LR42_RAT	Rufy1	RUN and FYVE domain containing 1	1	VLLQSALSLGR	VLLQSALSLGR	2	VLLQSALSLGR2	6456.6	5766.27	5458.52
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	VLLQSMACNQSAVYLQHCFATQR	VLLQSMAC(UniMod:4)NQSAVYLQHC(UniMod:4)FATQR	3	VLLQSMAC(UniMod:4)NQSAVYLQHC(UniMod:4)FATQR3	12973	6988.16	12300.6
A0A8J8YBF1	A0A8J8YBF1	A0A8J8YBF1_RAT	Slc30a6	Solute carrier family 30 member 6	1	VLLQTTPPHVIGQLDK	VLLQTTPPHVIGQLDK	3	VLLQTTPPHVIGQLDK3	10802.8	15101.8	16403.5
Q3B7T9	Q3B7T9	RFIP1_RAT	Rab11fip1	Rab11 family-interacting protein 1	1	VLLRPGDFQSR	VLLRPGDFQSR	3	VLLRPGDFQSR3	20717.9	26860.9	26289.5
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	VLLSALDR	VLLSALDR	2	VLLSALDR2	126627	111903	135605
Q63433	Q63433	PKN1_RAT	Pkn1	Serine/threonine-protein kinase N1	1	VLLSEFHSSGELFAIK	VLLSEFHSSGELFAIK	3	VLLSEFHSSGELFAIK3	19237.5	3481.79	16579.2
F1M9Q3	F1M9Q3	F1M9Q3_RAT	Ltn1	E3 ubiquitin-protein ligase listerin	1	VLLSFWER	VLLSFWER	2	VLLSFWER2	10491.2	9028.71	12691.4
P62839	P62839;P61078	UB2D2_RAT	Ube2d2	Ubiquitin-conjugating enzyme E2 D2	0	VLLSICSLLCDPNPDDPLVPEIAR	VLLSIC(UniMod:4)SLLC(UniMod:4)DPNPDDPLVPEIAR	3	VLLSIC(UniMod:4)SLLC(UniMod:4)DPNPDDPLVPEIAR3	3056.96	6281.6	
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	VLLSLENGVWAPNLHFHNPNPEIPALLDGR	VLLSLENGVWAPNLHFHNPNPEIPALLDGR	4	VLLSLENGVWAPNLHFHNPNPEIPALLDGR4	11671.4	10478.9	2822.25
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	VLLSPDYLPAMR	VLLSPDYLPAMR	2	VLLSPDYLPAMR2	48397.8	59749.2	58198.4
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	VLLSSTESR	VLLSSTESR	2	VLLSSTESR2	15918.9	20150.9	16551.9
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	VLLTEENK	VLLTEENK	2	VLLTEENK2	12303.6	10849.5	11950.8
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	VLLTEENKK	VLLTEENKK	2	VLLTEENKK2	9137.7		11081
Q4KM74	Q4KM74	SC22B_RAT	Sec22b	Vesicle-trafficking protein SEC22b	1	VLLTMIAR	VLLTMIAR	2	VLLTMIAR2	119708	98799.5	115826
A0A8J8XMU1	A0A8J8XMU1	A0A8J8XMU1_RAT	Ptprk	Receptor-type tyrosine-protein phosphatase kappa	1	VLLTRPGEGGTGLPGPPLITR	VLLTRPGEGGTGLPGPPLITR	3	VLLTRPGEGGTGLPGPPLITR3	9604.08	10287.1	15458.7
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VLLTTQGVDMISK	VLLTTQGVDMISK	2	VLLTTQGVDMISK2	333354	364716	316289
D3ZMR9	D3ZMR9	D3ZMR9_RAT	Mrpl21	Mitochondrial ribosomal protein L21	1	VLLVGTDNFTLLGKPLLGK	VLLVGTDNFTLLGKPLLGK	3	VLLVGTDNFTLLGKPLLGK3	5772		1867.03
A0A8I5ZUE7	A0A8I5ZUE7	A0A8I5ZUE7_RAT	Zc3h7b	Zinc finger CCCH-type containing 7B	1	VLLVMSK	VLLVMSK	2	VLLVMSK2	7304.01		9235.53
Q3MIE4	Q3MIE4	VAT1_RAT	Vat1	Synaptic vesicle membrane protein VAT-1 homolog	1	VLLVPGPEK	VLLVPGPEK	2	VLLVPGPEK2	109581	93483.3	84738.4
Q3MIE4	Q3MIE4	VAT1_RAT	Vat1	Synaptic vesicle membrane protein VAT-1 homolog	1	VLLVPGPEKET	VLLVPGPEKET	2	VLLVPGPEKET2	352251	317959	348977
D4A6U4	D4A6U4	D4A6U4_RAT	Tecpr2	Tectonin beta-propeller repeat containing 2	1	VLLVSTLQR	VLLVSTLQR	2	VLLVSTLQR2	8077.56	16811.4	7147.26
Q6AY80	Q6AY80	NQO2_RAT	Nqo2	Ribosyldihydronicotinamide dehydrogenase [quinone]	1	VLLVYAHQEPK	VLLVYAHQEPK	3	VLLVYAHQEPK3	6609.53	9579.72	5694.91
Q9QYP1	Q9QYP1	LRP4_RAT	Lrp4	Low-density lipoprotein receptor-related protein 4	1	VLLWQSLEKPR	VLLWQSLEKPR	3	VLLWQSLEKPR3	10680	6740.24	6759.64
Q4G069	Q4G069	RMD1_RAT	Rmdn1	Regulator of microtubule dynamics protein 1	1	VLLYEALEYAK	VLLYEALEYAK	2	VLLYEALEYAK2	20882.3	23880.3	23346.7
D3ZQI6	D3ZQI6	D3ZQI6_RAT	Xpo4	Exportin 4	1	VLMAPPSMVSNEQR	VLMAPPSMVSNEQR	2	VLMAPPSMVSNEQR2	60633	72970.7	52947.1
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	VLMATNRPDTLDPALMR	VLMATNRPDTLDPALMR	3	VLMATNRPDTLDPALMR3	90968.4	99576.2	105886
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	VLMATNRPDTLDPALMRPGR	VLMATNRPDTLDPALMRPGR	4	VLMATNRPDTLDPALMRPGR4	219933	184486	208807
P01026	P01026	CO3_RAT	C3	Complement C3	1	VLMDGVR	VLMDGVR	2	VLMDGVR2	367020	258498	228616
P01026	P01026	CO3_RAT	C3	Complement C3	1	VLMDGVRPSSPEALVGK	VLMDGVRPSSPEALVGK	2	VLMDGVRPSSPEALVGK2	84578.4	44199.9	57335.3
P01026	P01026	CO3_RAT	C3	Complement C3	1	VLMDGVRPSSPEALVGK	VLMDGVRPSSPEALVGK	3	VLMDGVRPSSPEALVGK3	6.01358e+06	5.68325e+06	5.09888e+06
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	VLMEFVENSR	VLMEFVENSR	2	VLMEFVENSR2	194272	201803	219806
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	VLMEFVENSRK	VLMEFVENSRK	2	VLMEFVENSRK2	14956	9566.1	6960.26
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	VLMEFVENSRK	VLMEFVENSRK	3	VLMEFVENSRK3	249098	160239	148882
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	VLMGNIDLSR	VLMGNIDLSR	2	VLMGNIDLSR2	177513	206792	208704
A0A8I6ADN8	A0A8I6ADN8	A0A8I6ADN8_RAT	Dock10	Dedicator of cytokinesis 10	1	VLMGNIGSGTEPYIK	VLMGNIGSGTEPYIK	2	VLMGNIGSGTEPYIK2	5075.03	4478.01	2484.35
A0A0G2K1Q8	A0A0G2K1Q8	ABCA3_RAT	Abca3	Phospholipid-transporting ATPase ABCA3	1	VLMLDEPTSGMDAVSR	VLMLDEPTSGMDAVSR	2	VLMLDEPTSGMDAVSR2	4291.59	1039.1	7630.91
A0A8I5ZNK2	A0A8I5ZNK2	A0A8I5ZNK2_RAT	Oxsr1	non-specific serine/threonine protein kinase	1	VLMLTLQNDPPSLDTGVQDK	VLMLTLQNDPPSLDTGVQDK	3	VLMLTLQNDPPSLDTGVQDK3	7704.38	5260.82	8152.94
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	VLMQELMTLIEQR	VLMQELMTLIEQR	2	VLMQELMTLIEQR2		7439.37	
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	VLMQELMTLIEQR	VLMQELMTLIEQR	3	VLMQELMTLIEQR3	12411.5	16646.3	11077.6
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	VLMSVDWR	VLMSVDWR	2	VLMSVDWR2	36706.7	30906.7	25321.7
Q5M9G9	Q5M9G9	FAKD4_RAT	Tbrg4	FAST kinase domain-containing protein 4	1	VLMTLAAQSR	VLMTLAAQSR	2	VLMTLAAQSR2	22058	20622.3	17732.1
Q5FVJ6	Q5FVJ6	BSCL2_RAT	Bscl2	Seipin	1	VLMYGQPYR	VLMYGQPYR	2	VLMYGQPYR2	9187.17	19301	17508.5
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	VLNCDTISQVK	VLNC(UniMod:4)DTISQVK	2	VLNC(UniMod:4)DTISQVK2	7519.53	5229.84	4795.62
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	VLNCQGK	VLNC(UniMod:4)QGK	2	VLNC(UniMod:4)QGK2			208161
Q9Z2F5	Q9Z2F5	CTBP1_RAT	Ctbp1	C-terminal-binding protein 1	1	VLNEAVGALMYHTITLTR	VLNEAVGALMYHTITLTR	3	VLNEAVGALMYHTITLTR3		10219.9	4639.29
P62994	P62994	GRB2_RAT	Grb2	Growth factor receptor-bound protein 2	1	VLNEECDQNWYK	VLNEEC(UniMod:4)DQNWYK	2	VLNEEC(UniMod:4)DQNWYK2	52653.2	47189.7	41512.7
P04762	P04762	CATA_RAT	Cat	Catalase	1	VLNEEER	VLNEEER	2	VLNEEER2	4030.71	27686.8	
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	VLNELYSVMK	VLNELYSVMK	2	VLNELYSVMK2	32372.5	50533.6	57433.1
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	VLNFEQAVK	VLNFEQAVK	2	VLNFEQAVK2	25004.9	42770	18891
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	VLNGICAYLNR	VLNGIC(UniMod:4)AYLNR	2	VLNGIC(UniMod:4)AYLNR2	10480	19517.7	27522
Q5RJK6	Q5RJK6	Q5RJK6_RAT	Inpp1	Inositol polyphosphate-1-phosphatase	1	VLNGNMLASEALAK	VLNGNMLASEALAK	2	VLNGNMLASEALAK2	4973.45	1863.85	3178.54
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	VLNGPDGEGVPEAVVTLNNQIK	VLNGPDGEGVPEAVVTLNNQIK	3	VLNGPDGEGVPEAVVTLNNQIK3	21676.4	15472.2	29498.2
Q9EPH1	Q9EPH1	A1BG_RAT	A1bg	Alpha-1B-glycoprotein	1	VLNIQGFSPTR	VLNIQGFSPTR	2	VLNIQGFSPTR2	18558.5	16876.6	12730.5
D3ZKT0	D3ZKT0	TAM41_RAT	Tamm41	Phosphatidate cytidylyltransferase, mitochondrial	1	VLNIVKPNVVHFR	VLNIVKPNVVHFR	3	VLNIVKPNVVHFR3	4540.26	1773.31	
D3ZKT0	D3ZKT0	TAM41_RAT	Tamm41	Phosphatidate cytidylyltransferase, mitochondrial	1	VLNIVKPNVVHFR	VLNIVKPNVVHFR	4	VLNIVKPNVVHFR4	10987.5	18956.5	14051.5
P27590	P27590	UROM_RAT	Umod	Uromodulin	1	VLNLGPITR	VLNLGPITR	2	VLNLGPITR2	9689.1	9671.95	9847.34
F7EYC4	F7EYC4	F7EYC4_RAT	Tom1	Target of myb1 membrane trafficking protein	1	VLNLIQSWADAFR	VLNLIQSWADAFR	2	VLNLIQSWADAFR2	44118.3	27357.7	27326.3
F7EYC4	F7EYC4	F7EYC4_RAT	Tom1	Target of myb1 membrane trafficking protein	1	VLNLIQSWADAFR	VLNLIQSWADAFR	3	VLNLIQSWADAFR3	1592.41	1553.1	
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	VLNLLWNLAHSDDVPVDIMDLALSAHIK	VLNLLWNLAHSDDVPVDIMDLALSAHIK	4	VLNLLWNLAHSDDVPVDIMDLALSAHIK4	8011.64	2875.66	
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	VLNLNAGEILQMFGK	VLNLNAGEILQMFGK	2	VLNLNAGEILQMFGK2	5608.57	4088.06	6707.61
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	VLNLNAGEILQMFGK	VLNLNAGEILQMFGK	3	VLNLNAGEILQMFGK3	2875.06		
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	VLNLQYFWDHPETLLLLK	VLNLQYFWDHPETLLLLK	3	VLNLQYFWDHPETLLLLK3		4795.86	1359.5
P70587	P70587	LRRC7_RAT	Lrrc7	Leucine-rich repeat-containing protein 7	1	VLNLSDNR	VLNLSDNR	2	VLNLSDNR2	1.17624e+06	1.19918e+06	1.17655e+06
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	VLNLSEELR	VLNLSEELR	2	VLNLSEELR2	168139	190462	148759
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	VLNLSEELRDIPQAAK	VLNLSEELRDIPQAAK	3	VLNLSEELRDIPQAAK3	28956.2	62169.5	104232
Q9QYF3	Q9QYF3	MYO5A_RAT	Myo5a	Unconventional myosin-Va	1	VLNLYTPVNEFEER	VLNLYTPVNEFEER	2	VLNLYTPVNEFEER2	10272	10903.6	4656.29
P16617	P16617	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	1	VLNNMEIGTSLYDEEGAK	VLNNMEIGTSLYDEEGAK	3	VLNNMEIGTSLYDEEGAK3	20810.2	8591.39	18265.8
D3ZYS7	D3ZYS7	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	1	VLNNRPIMFR	VLNNRPIMFR	3	VLNNRPIMFR3	285922	273334	302584
P51111	P51111	HD_RAT	Htt	Huntingtin	1	VLNNVVIYLLGDEDPR	VLNNVVIYLLGDEDPR	2	VLNNVVIYLLGDEDPR2		52131.3	
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	VLNPDDEEQVLSDPNLVIR	VLNPDDEEQVLSDPNLVIR	3	VLNPDDEEQVLSDPNLVIR3	5818.39	6210.56	11594.2
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	VLNSESDVVSK	VLNSESDVVSK	2	VLNSESDVVSK2	64261.7	65004.4	56580.8
P61314	D3ZF52;P61314;A0A8I5ZY58	RL15_RAT	Rpl15	Large ribosomal subunit protein eL15	0	VLNSYWVGEDSTYK	VLNSYWVGEDSTYK	2	VLNSYWVGEDSTYK2	29331.2	22865.3	22087
Q5XXR3	Q5XXR3	ARHG6_RAT	Arhgef6	Rho guanine nucleotide exchange factor 6	1	VLNTLLAVNK	VLNTLLAVNK	2	VLNTLLAVNK2	4717.49	4155.03	
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	VLNTLNQQEK	VLNTLNQQEK	2	VLNTLNQQEK2	35685.8	41747.6	30081.3
P97829	P97829	CD47_RAT	Cd47	Leukocyte surface antigen CD47	1	VLNVEAQSTDEMFVK	VLNVEAQSTDEMFVK	2	VLNVEAQSTDEMFVK2	240106	234741	278325
P97829	P97829	CD47_RAT	Cd47	Leukocyte surface antigen CD47	1	VLNVEAQSTDEMFVK	VLNVEAQSTDEMFVK	3	VLNVEAQSTDEMFVK3	16550.6	17466.5	14624.8
Q5XIN7	Q5XIN7	PMGT1_RAT	Pomgnt1	Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1	1	VLNVPVAVIAGNRPNYLYR	VLNVPVAVIAGNRPNYLYR	3	VLNVPVAVIAGNRPNYLYR3	33401.1	24100.4	24960
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	VLPAGGPAVACVR	VLPAGGPAVAC(UniMod:4)VR	2	VLPAGGPAVAC(UniMod:4)VR2	562205	551341	420530
P25093	P25093	FAAA_RAT	Fah	Fumarylacetoacetase	1	VLPALSPA	VLPALSPA	1	VLPALSPA1	2139.32		
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	VLPANHR	VLPANHR	2	VLPANHR2			97867.2
A0A8I5ZP12	A0A8I5ZP12	A0A8I5ZP12_RAT	Ago1	Argonaute RISC component 1	1	VLPAPILQYGGR	VLPAPILQYGGR	2	VLPAPILQYGGR2	6506.69		
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	VLPAQATEYAFAFIQVPQDEDAR	VLPAQATEYAFAFIQVPQDEDAR	3	VLPAQATEYAFAFIQVPQDEDAR3	21622.3	20643.5	30064.8
D3ZWW0	D3ZWW0	D3ZWW0_RAT	Slc35c1	Solute carrier family 35 member C1	1	VLPAVDHSIWR	VLPAVDHSIWR	3	VLPAVDHSIWR3	69593.8	61376	59951.8
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	VLPAVGISYVVYENMK	VLPAVGISYVVYENMK	2	VLPAVGISYVVYENMK2	98015.1	84602.3	46707.4
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	VLPAVGISYVVYENMK	VLPAVGISYVVYENMK	3	VLPAVGISYVVYENMK3	48041.9	40663.9	41458.9
A0A8I5YBS8	A0A8I5YBS8	A0A8I5YBS8_RAT	ENSRNOG00000064132	Uncharacterized protein	1	VLPDQGSPK	VLPDQGSPK	2	VLPDQGSPK2	14934.5	14273.3	11236
D3ZQ82	D3ZQ82	D3ZQ82_RAT	Rfx1	Regulatory factor X1	1	VLPEGVGPGDIK	VLPEGVGPGDIK	2	VLPEGVGPGDIK2	2549.24	5655.31	2425.32
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	VLPELEEIR	VLPELEEIR	2	VLPELEEIR2	81258.6	61941	69778.7
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	VLPEVTPNR	VLPEVTPNR	2	VLPEVTPNR2	100543	83129.2	73496.8
D4A929	D4A929	WDR81_RAT	Wdr81	WD repeat-containing protein 81	1	VLPFEEGSCSPETLTR	VLPFEEGSC(UniMod:4)SPETLTR	2	VLPFEEGSC(UniMod:4)SPETLTR2	11671.7	16233.2	18328.8
Q8R4A1	Q8R4A1	ERO1A_RAT	Ero1a	ERO1-like protein alpha	1	VLPFFERPDFQLFTGNK	VLPFFERPDFQLFTGNK	3	VLPFFERPDFQLFTGNK3	56463.7	52398.1	52885.4
D3ZHI8	D3ZHI8	D3ZHI8_RAT	Trappc11	Trafficking protein particle complex subunit 11	1	VLPGDHEYPK	VLPGDHEYPK	3	VLPGDHEYPK3	70076.2	67832.4	84336.1
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	VLPGDYEILATHPTWALK	VLPGDYEILATHPTWALK	3	VLPGDYEILATHPTWALK3	29159.2	33621.1	51425.8
Q0PMD2	Q0PMD2	ANTR1_RAT	Antxr1	Anthrax toxin receptor 1	1	VLPGGDTYMHEGFER	VLPGGDTYMHEGFER	2	VLPGGDTYMHEGFER2	25471	25545.4	13577.7
Q0PMD2	Q0PMD2	ANTR1_RAT	Antxr1	Anthrax toxin receptor 1	1	VLPGGDTYMHEGFER	VLPGGDTYMHEGFER	3	VLPGGDTYMHEGFER3	137416	169084	122702
D4A0T9	D4A0T9	D4A0T9_RAT	Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	1	VLPGGGVLLLYR	VLPGGGVLLLYR	2	VLPGGGVLLLYR2	45474.1	51978.1	53982.2
D4A249	D4A249	D4A249_RAT	Mblac2	Metallo-beta-lactamase domain containing 2	1	VLPGHFNTFGAER	VLPGHFNTFGAER	3	VLPGHFNTFGAER3	5676.53	8974.35	
P16617	P16617;M0R6Y8	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	0	VLPGVDALSNV	VLPGVDALSNV	2	VLPGVDALSNV2	47612.6	64841.9	55150.8
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	VLPIMVR	VLPIMVR	2	VLPIMVR2	15935.5	26798.8	20728.3
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	VLPIVHGLGMDSHLVVK	VLPIVHGLGMDSHLVVK	3	VLPIVHGLGMDSHLVVK3	39361.6	29926	25302.1
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	VLPIVHGLGMDSHLVVK	VLPIVHGLGMDSHLVVK	4	VLPIVHGLGMDSHLVVK4	25332.4	14882.7	27265.6
O35217	O35217	MINP1_RAT	Minpp1	Multiple inositol polyphosphate phosphatase 1	1	VLPLAHSQK	VLPLAHSQK	2	VLPLAHSQK2	55502.3	39976.5	36342.9
Q8R3Z7	Q8R3Z7	Q8R3Z7_RAT	Ehd4	EH-domain containing 4	1	VLPLEEAYR	VLPLEEAYR	2	VLPLEEAYR2	269566	212501	251775
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	VLPLSWHNR	VLPLSWHNR	2	VLPLSWHNR2	30132.2	19014.6	23852.4
P04182	P04182	OAT_RAT	Oat	Ornithine aminotransferase, mitochondrial	1	VLPMNTGVEAGETACK	VLPMNTGVEAGETAC(UniMod:4)K	2	VLPMNTGVEAGETAC(UniMod:4)K2	510.272	3028.62	
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	VLPMSIAR	VLPMSIAR	2	VLPMSIAR2	549839	621528	586508
A0A8I6AAA9	A0A8I6AAA9	A0A8I6AAA9_RAT	Lrch1	Leucine rich repeats and calponin homology domain containing 1	1	VLPPELVDLPLVK	VLPPELVDLPLVK	2	VLPPELVDLPLVK2	47517.6	62503	68358.5
A0A8I6AAA9	A0A8I6AAA9	A0A8I6AAA9_RAT	Lrch1	Leucine rich repeats and calponin homology domain containing 1	1	VLPPELVDLPLVK	VLPPELVDLPLVK	3	VLPPELVDLPLVK3	3371.77	4188.82	1420.72
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	VLPPSHR	VLPPSHR	2	VLPPSHR2			34911.1
Q0D2L2	Q0D2L2	Q0D2L2_RAT	Mrps22	Mitochondrial ribosomal protein S22	1	VLPPVIFK	VLPPVIFK	2	VLPPVIFK2		5010.56	2278.27
F7EQT9	F7EQT9	F7EQT9_RAT	Agpat1	1-acyl-sn-glycerol-3-phosphate acyltransferase	1	VLPPVPTEGLTPDDVPALADR	VLPPVPTEGLTPDDVPALADR	3	VLPPVPTEGLTPDDVPALADR3	34723.8	47129.7	55337.6
D3ZR49	D3ZR49	D3ZR49_RAT	Man1a2	alpha-1,2-Mannosidase	1	VLPPVPVPQR	VLPPVPVPQR	2	VLPPVPVPQR2	40744.2	44464.1	61954.7
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	VLPQDKEYYK	VLPQDKEYYK	2	VLPQDKEYYK2	30492.7	23655.5	22817
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	VLPQDKEYYK	VLPQDKEYYK	3	VLPQDKEYYK3	129846	148161	128248
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	VLPQLLTAFEFGNAGAVVLTPLFK	VLPQLLTAFEFGNAGAVVLTPLFK	3	VLPQLLTAFEFGNAGAVVLTPLFK3		3457.97	13535
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	VLPQLQPGK	VLPQLQPGK	2	VLPQLQPGK2	502827	515882	458140
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	VLPQQHR	VLPQQHR	2	VLPQQHR2			516509
Q6AXY8	Q6AXY8	Q6AXY8_RAT	Dhrs1	Dehydrogenase/reductase 1	1	VLPSCDLAR	VLPSC(UniMod:4)DLAR	2	VLPSC(UniMod:4)DLAR2	42035.4	36533.5	34504.6
Q5XIE1	Q5XIE1	THEM6_RAT	Them6	Protein THEM6	1	VLPSDLDLLLHMNNAR	VLPSDLDLLLHMNNAR	3	VLPSDLDLLLHMNNAR3	49723.8	47791.9	49832.6
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	VLPSGALEIEQALPIHAGR	VLPSGALEIEQALPIHAGR	3	VLPSGALEIEQALPIHAGR3	7957.66		
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	VLPSGIGHTTNCFLR	VLPSGIGHTTNC(UniMod:4)FLR	3	VLPSGIGHTTNC(UniMod:4)FLR3	18586.8	63189.7	40563.4
P67779	P67779;A0A8I5ZUY9	PHB1_RAT	Phb1	Prohibitin 1	0	VLPSITTEILK	VLPSITTEILK	2	VLPSITTEILK2	617085	481400	607671
Q5XIH7	Q5XIH7	PHB2_RAT	Phb2	Prohibitin-2	1	VLPSIVNEVLK	VLPSIVNEVLK	2	VLPSIVNEVLK2	763343	740924	824057
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VLPTHDASK	VLPTHDASK	1	VLPTHDASK1	295758		51306.1
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VLPTHDASK	VLPTHDASK	2	VLPTHDASK2	1.18666e+06		2.52676e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VLPTHDASKVK	VLPTHDASKVK	2	VLPTHDASKVK2	1418.31	5722.51	
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VLPTHDASKVK	VLPTHDASKVK	3	VLPTHDASKVK3	10028.4	19326.5	20559.9
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	VLPTIPK	VLPTIPK	2	VLPTIPK2	236450	242287	218501
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	VLPTYDASK	VLPTYDASK	2	VLPTYDASK2	20003.3	18775.3	16709.6
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	VLPVCRPNPCQNGGVCSR	VLPVC(UniMod:4)RPNPC(UniMod:4)QNGGVC(UniMod:4)SR	3	VLPVC(UniMod:4)RPNPC(UniMod:4)QNGGVC(UniMod:4)SR3	1.54647e+06	1.58645e+06	1.4586e+06
Q924S5	A0A8I6B3S7;Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	0	VLPVGGIK	VLPVGGIK	2	VLPVGGIK2	128247	113986	132699
Q7TNZ6	Q7TNZ6	STRAA_RAT	Strada	STE20-related kinase adapter protein alpha	1	VLPWLSPEVLQQNLQGYDAK	VLPWLSPEVLQQNLQGYDAK	3	VLPWLSPEVLQQNLQGYDAK3	3467.7	8470.36	2454.78
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	VLQAALEFIR	VLQAALEFIR	2	VLQAALEFIR2	22884.1	26727.9	12482.5
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	VLQAGVLDNWYPLQGGQGQVHLR	VLQAGVLDNWYPLQGGQGQVHLR	3	VLQAGVLDNWYPLQGGQGQVHLR3	287183	248356	246426
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	VLQAGVLDNWYPLQGGQGQVHLR	VLQAGVLDNWYPLQGGQGQVHLR	4	VLQAGVLDNWYPLQGGQGQVHLR4	18499.3	19491.6	27182.6
P17074	F1LYF3;D3ZGN8;P17074	RS19_RAT	Rps19	Small ribosomal subunit protein eS19	0	VLQALEGLK	VLQALEGLK	2	VLQALEGLK2	13051.9	13557	9181.01
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	VLQALGSEPIQYAVPVVK	VLQALGSEPIQYAVPVVK	2	VLQALGSEPIQYAVPVVK2	114565	165103	138706
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	VLQALGSEPIQYAVPVVK	VLQALGSEPIQYAVPVVK	3	VLQALGSEPIQYAVPVVK3	66123.4	97884	82737
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	VLQAMLHYQK	VLQAMLHYQK	2	VLQAMLHYQK2	15746.3	5199.67	15063.2
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	VLQAMLHYQK	VLQAMLHYQK	3	VLQAMLHYQK3	46563.4	34925.7	37564.4
P26772	P26772	CH10_RAT	Hspe1	10 kDa heat shock protein, mitochondrial	1	VLQATVVAVGSGGK	VLQATVVAVGSGGK	2	VLQATVVAVGSGGK2	42504.5	45000.5	35786.2
P26772	P26772	CH10_RAT	Hspe1	10 kDa heat shock protein, mitochondrial	1	VLQATVVAVGSGGK	VLQATVVAVGSGGK	3	VLQATVVAVGSGGK3	34256.7	26958	28779.5
D4A7C0	D4A7C0	GPN2_RAT	Gpn2	GPN-loop GTPase 2	1	VLQAVDK	VLQAVDK	2	VLQAVDK2	20714.4	25057.2	18964.2
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	VLQDGGCSLPILR	VLQDGGC(UniMod:4)SLPILR	2	VLQDGGC(UniMod:4)SLPILR2	70515.9	70611.4	66972.1
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	VLQDLLSEK	VLQDLLSEK	2	VLQDLLSEK2	34237.5	38077.9	36160.1
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	VLQDLVMDILR	VLQDLVMDILR	2	VLQDLVMDILR2	92660.1	97497.8	72789.6
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	VLQDLVMDILR	VLQDLVMDILR	3	VLQDLVMDILR3	9583.81	10609.3	7185.17
Q66H86	Q66H86	OLFL1_RAT	Olfml1	Olfactomedin-like protein 1	1	VLQEAEEEK	VLQEAEEEK	2	VLQEAEEEK2	20841	27918.4	55640.3
Q66H86	Q66H86	OLFL1_RAT	Olfml1	Olfactomedin-like protein 1	1	VLQEAEEEKK	VLQEAEEEKK	2	VLQEAEEEKK2	4262.92	7108.56	8881.89
Q63530	Q63530	PTER_RAT	Pter	Phosphotriesterase-related protein	1	VLQEAGADISK	VLQEAGADISK	2	VLQEAGADISK2	4776.55	5998.34	3110.35
Q63530	Q63530	PTER_RAT	Pter	Phosphotriesterase-related protein	1	VLQEAGADISKTVMSHLDR	VLQEAGADISKTVMSHLDR	3	VLQEAGADISKTVMSHLDR3		13058.7	
F1LRI5	F1LRI5	F1LRI5_RAT	Gcn1	GCN1 activator of EIF2AK4	1	VLQEALCVISGVPGLK	VLQEALC(UniMod:4)VISGVPGLK	3	VLQEALC(UniMod:4)VISGVPGLK3	3357.76		2165.46
A0A8I5XWV4	A0A8I5XWV4	A0A8I5XWV4_RAT	Tm6sf1	Transmembrane 6 superfamily member 1	1	VLQEAQAK	VLQEAQAK	2	VLQEAQAK2	96019.1	93337.7	102970
P26453	P26453	BASI_RAT	Bsg	Basigin	1	VLQEDTLPDLQMK	VLQEDTLPDLQMK	2	VLQEDTLPDLQMK2	200212	206303	222851
P26453	P26453	BASI_RAT	Bsg	Basigin	1	VLQEDTLPDLQMK	VLQEDTLPDLQMK	3	VLQEDTLPDLQMK3	46606.6	41648	48749.2
D3ZXJ5	D3ZXJ5	D3ZXJ5_RAT	Efl1	Elongation factor like GTPase 1	1	VLQEEMK	VLQEEMK	2	VLQEEMK2	8886.6	4973.08	6249.83
O70490	O70490	ACSM2_RAT	Acsm2	Acyl-coenzyme A synthetase ACSM2, mitochondrial	1	VLQEHVK	VLQEHVK	2	VLQEHVK2			1271.67
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	VLQESEEMLDLVFLMR	VLQESEEMLDLVFLMR	3	VLQESEEMLDLVFLMR3	4394.48		
Q9JMB3	Q9JMB3	Q9JMB3_RAT	Epb41l3	Erythrocyte membrane protein band 4.1-like 3	1	VLQETVLVEER	VLQETVLVEER	2	VLQETVLVEER2	6410.83	3091.64	4248.28
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	VLQEYTSDDMNVAPGDR	VLQEYTSDDMNVAPGDR	2	VLQEYTSDDMNVAPGDR2	21344.5	17987.2	15681.6
D4ADT5	D4ADT5	D4ADT5_RAT	Rig1	RNA helicase	1	VLQFALEK	VLQFALEK	2	VLQFALEK2	3807.69	8367.35	5950.42
Q64165	Q64165	Q64165_RAT	Gcnt1	Glucosaminyl (N-acetyl) transferase 1	1	VLQGDPEEIQK	VLQGDPEEIQK	2	VLQGDPEEIQK2	24298.2	21848.7	20986.6
F1MAD3	F1MAD3	F1MAD3_RAT	Pkd1	Polycystin 1, transient receptor potential channel interacting	1	VLQGILVR	VLQGILVR	2	VLQGILVR2	7371.14	8591.06	
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	VLQGNITHCAEPYIK	VLQGNITHC(UniMod:4)AEPYIK	3	VLQGNITHC(UniMod:4)AEPYIK3	15066.3	13588.1	17629.3
F1M943	F1M943	F1M943_RAT	Armc8	Armadillo repeat-containing protein 8	1	VLQGVIDMK	VLQGVIDMK	2	VLQGVIDMK2	19355.4	17000.3	15696.6
A0A8I5ZTW6	A0A8I5ZTW6	A0A8I5ZTW6_RAT	Gopc	Golgi associated PDZ and coiled-coil motif containing	1	VLQGYNK	VLQGYNK	2	VLQGYNK2	18009.7	25883.9	
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	VLQIIPESMFTSLLK	VLQIIPESMFTSLLK	2	VLQIIPESMFTSLLK2		11303.1	11691.9
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	VLQIIPYEFNR	VLQIIPYEFNR	2	VLQIIPYEFNR2	97494.3	90070.1	108530
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	VLQIIPYEFNR	VLQIIPYEFNR	3	VLQIIPYEFNR3	2633.97	4229.53	5828.72
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	VLQIVTNRDDVQGYAAK	VLQIVTNRDDVQGYAAK	3	VLQIVTNRDDVQGYAAK3	6676.24		6591.36
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	VLQLEDDSLDSK	VLQLEDDSLDSK	2	VLQLEDDSLDSK2	336882	347839	318800
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	VLQLEEELSLR	VLQLEEELSLR	2	VLQLEEELSLR2	95330.7	84818.7	92263.7
O88277	O88277	FAT2_RAT	Fat2	Protocadherin Fat 2	1	VLQLILDDPDSPQNGPPYFFR	VLQLILDDPDSPQNGPPYFFR	3	VLQLILDDPDSPQNGPPYFFR3		9612.61	7512.67
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	VLQLINDNTATALSYGVFR	VLQLINDNTATALSYGVFR	3	VLQLINDNTATALSYGVFR3	191480	245514	283466
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	VLQLMENQIGAVER	VLQLMENQIGAVER	2	VLQLMENQIGAVER2	8121.24	11566.6	11246.5
A0A0G2JWA3	A0A0G2JWA3	A0A0G2JWA3_RAT	Xpo7	Exportin 7	1	VLQLMNLTDSR	VLQLMNLTDSR	2	VLQLMNLTDSR2	8351.24	12059.9	
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	VLQLTSWDEDAWASK	VLQLTSWDEDAWASK	2	VLQLTSWDEDAWASK2	490967	9372.6	12460.4
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	VLQLTSWDEDAWASK	VLQLTSWDEDAWASK	3	VLQLTSWDEDAWASK3	43523.2	36171.7	43434.4
Q9QVC8	Q9QVC8	FKBP4_RAT	Fkbp4	Peptidyl-prolyl cis-trans isomerase FKBP4	1	VLQLYPSNK	VLQLYPSNK	2	VLQLYPSNK2	55888.5	42077.6	39536.7
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VLQLYQITQINHGLMMVGPSGSGK	VLQLYQITQINHGLMMVGPSGSGK	3	VLQLYQITQINHGLMMVGPSGSGK3	55494.7	55850.5	47245.7
D3ZAP9	A0A8I6ALX9;D3ZAP9	D3ZAP9_RAT	Gpd1l1	Glycerol-3-phosphate dehydrogenase [NAD(+)]	0	VLQNGLLFK	VLQNGLLFK	2	VLQNGLLFK2	7723.54		3302.89
Q08326	A0A8I6GKW6;Q08326	MSS4_RAT	Rabif	Guanine nucleotide exchange factor MSS4	0	VLQPGTALFSR	VLQPGTALFSR	2	VLQPGTALFSR2	68718	73160	76469.6
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	VLQPTIFPVVPR	VLQPTIFPVVPR	2	VLQPTIFPVVPR2	63872.6	39337.6	41309.8
Q68FW4	Q68FW4	STX18_RAT	Stx18	Syntaxin-18	1	VLQQETEIDSIHQLVVGATENIK	VLQQETEIDSIHQLVVGATENIK	3	VLQQETEIDSIHQLVVGATENIK3	4999.85		8136.12
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	VLQQGDIGECAEPYMIFK	VLQQGDIGEC(UniMod:4)AEPYMIFK	3	VLQQGDIGEC(UniMod:4)AEPYMIFK3	6736.4	13522	11150.3
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	VLQQGEIADCAEPYMIIK	VLQQGEIADC(UniMod:4)AEPYMIIK	3	VLQQGEIADC(UniMod:4)AEPYMIIK3	16076.5	17469.4	10162.7
A0A8I6GK59	A0A8I6GK59	A0A8I6GK59_RAT	Bmp2k	BMP-2 inducible kinase	1	VLQQLQQGDWR	VLQQLQQGDWR	2	VLQQLQQGDWR2	8964.64	7357.27	8311.87
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	VLQQQQK	VLQQQQK	1	VLQQQQK1			1010.41
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	VLQQQQK	VLQQQQK	2	VLQQQQK2			150631
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	VLQQTLNYINQGVSHALTWK	VLQQTLNYINQGVSHALTWK	3	VLQQTLNYINQGVSHALTWK3	13825.2	12280	5888.01
Q7TP98	Q7TP98	ILF2_RAT	Ilf2	Interleukin enhancer-binding factor 2	1	VLQSALAAIR	VLQSALAAIR	2	VLQSALAAIR2	10918.5	8385.15	7384.64
Q792I0	Q792I0	LIN7C_RAT	Lin7c	Protein lin-7 homolog C	1	VLQSEFCNAVR	VLQSEFC(UniMod:4)NAVR	2	VLQSEFC(UniMod:4)NAVR2	32856	25524.8	18370.8
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	VLQSIIK	VLQSIIK	2	VLQSIIK2	44914.5	49713.5	46650.9
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	VLQSSVLQK	VLQSSVLQK	2	VLQSSVLQK2	190449	189090	157208
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	VLQTIGI	VLQTIGI	1	VLQTIGI1	31218.3	32293.4	25269.7
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	VLQTLGALLATCR	VLQTLGALLATC(UniMod:4)R	2	VLQTLGALLATC(UniMod:4)R2	27033.2	25250.8	25972.4
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	VLQTLGALLATCR	VLQTLGALLATC(UniMod:4)R	3	VLQTLGALLATC(UniMod:4)R3	13885	14086.7	13053.3
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	VLQVIIQLR	VLQVIIQLR	2	VLQVIIQLR2	5439.5	8701.82	7314.09
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	VLQVLHQNNVELVNIGGTDIVDGNPK	VLQVLHQNNVELVNIGGTDIVDGNPK	3	VLQVLHQNNVELVNIGGTDIVDGNPK3	16989.3	29170.9	24994.4
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	VLQVSIGPGLPK	VLQVSIGPGLPK	2	VLQVSIGPGLPK2	40412.2	32037.3	27075.7
Q63481	Q63481	RAB7L_RAT	Rab29	Ras-related protein Rab-7L1	1	VLQWSDSEMVR	VLQWSDSEMVR	2	VLQWSDSEMVR2	38515.5	35898.1	43007.5
Q566C7	Q566C7	NUDT3_RAT	Nudt3	Diphosphoinositol polyphosphate phosphohydrolase 1	1	VLQYHKPVQASYFEALR	VLQYHKPVQASYFEALR	4	VLQYHKPVQASYFEALR4	8338.37	10499.5	5167.47
A0A8I6AK45	A0A8I6AK45	A0A8I6AK45_RAT	Mtch2	Mitochondrial carrier 2	1	VLQYYQECEKPEDLGSANVQK	VLQYYQEC(UniMod:4)EKPEDLGSANVQK	3	VLQYYQEC(UniMod:4)EKPEDLGSANVQK3	153748	163803	166193
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	VLQYYSAATEHDR	VLQYYSAATEHDR	3	VLQYYSAATEHDR3	2147.23	3758.65	
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	VLREDSR	VLREDSR	2	VLREDSR2			72742.6
D4A1Y5	D4A1Y5	D4A1Y5_RAT	Mthfd2	methenyltetrahydrofolate cyclohydrolase	1	VLRPEELEVLK	VLRPEELEVLK	3	VLRPEELEVLK3	110213	105216	76863.2
Q3KRE2	Q3KRE2	Q3KRE2_RAT	Mettl7a	Methyltransferase like 7A	1	VLRPGGAFYFMEHVADER	VLRPGGAFYFMEHVADER	4	VLRPGGAFYFMEHVADER4	6141.94	5558.51	5533.17
Q6AXU6	Q6AXU6	JUPI1_RAT	Jpt1	Jupiter microtubule associated homolog 1	1	VLRPPGGGSNFSLGFDEPTEQPVRK	VLRPPGGGSNFSLGFDEPTEQPVRK	4	VLRPPGGGSNFSLGFDEPTEQPVRK4	11638.4	3691.82	
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VLRPQVTAVAQQNQGEAPEPQDMK	VLRPQVTAVAQQNQGEAPEPQDMK	3	VLRPQVTAVAQQNQGEAPEPQDMK3	217202	242618	199331
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VLRPQVTAVAQQNQGEAPEPQDMK	VLRPQVTAVAQQNQGEAPEPQDMK	4	VLRPQVTAVAQQNQGEAPEPQDMK4	31067.3	38348.8	27799
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	VLRPSEYTK	VLRPSEYTK	2	VLRPSEYTK2	42290.5	39731.5	33809.7
D3ZWS6	D3ZWS6	D3ZWS6_RAT	Naa30	N(alpha)-acetyltransferase 30, NatC catalytic subunit	1	VLSAAEAAAPDGAPK	VLSAAEAAAPDGAPK	2	VLSAAEAAAPDGAPK2	10029	13416.8	9332.46
M0R915	M0R915;A0A8I6GLQ4	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	0	VLSAAGFVFTGK	VLSAAGFVFTGK	2	VLSAAGFVFTGK2	51344.5	59379	54645.3
P01946	P01946	HBA_RAT	Hba1	Hemoglobin subunit alpha-1/2	1	VLSADDK	VLSADDK	1	VLSADDK1	14570.7	13185.4	
P01946	P01946	HBA_RAT	Hba1	Hemoglobin subunit alpha-1/2	1	VLSADDKTNIK	VLSADDKTNIK	2	VLSADDKTNIK2	97805.3	89827.4	96942.8
P01946	P01946	HBA_RAT	Hba1	Hemoglobin subunit alpha-1/2	1	VLSADDKTNIK	VLSADDKTNIK	3	VLSADDKTNIK3	1.72556e+06	2.00505e+06	2.02206e+06
G3V965	G3V965	G3V965_RAT	Agpat5	1-acylglycerol-3-phosphate O-acyltransferase 5	1	VLSALLPAR	VLSALLPAR	2	VLSALLPAR2	6067.73	5255.16	4241.43
O35820	A0A8I5ZQ76;O35820	DNPH1_RAT	Dnph1	2'-deoxynucleoside 5'-phosphate N-hydrolase 1	0	VLSAMIR	VLSAMIR	2	VLSAMIR2	28875.9		
Q68FR6	Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	1	VLSAPPHFHFGQTNR	VLSAPPHFHFGQTNR	2	VLSAPPHFHFGQTNR2	12008.8	8506.42	10079.5
Q68FR6	Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	1	VLSAPPHFHFGQTNR	VLSAPPHFHFGQTNR	3	VLSAPPHFHFGQTNR3	507961	534728	390726
Q68FR6	Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	1	VLSAPPHFHFGQTNR	VLSAPPHFHFGQTNR	4	VLSAPPHFHFGQTNR4	1.95692e+06	1.90844e+06	1.78023e+06
D3ZA22	D3ZA22	D3ZA22_RAT	Trim47	Tripartite motif-containing 47	1	VLSAVEDR	VLSAVEDR	2	VLSAVEDR2	49922.3	50732.3	59533.7
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	VLSAVGSAQLLMSQK	VLSAVGSAQLLMSQK	2	VLSAVGSAQLLMSQK2	22344.2	29659.1	25469.5
P97839	P97839	DLGP4_RAT	Dlgap4	Disks large-associated protein 4	1	VLSAVGSAQLLMSQK	VLSAVGSAQLLMSQK	3	VLSAVGSAQLLMSQK3	21675.1	18431.1	16668.9
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	VLSDLGEGEK	VLSDLGEGEK	2	VLSDLGEGEK2	187995	153498	135325
P31652	P31652	SC6A4_RAT	Slc6a4	Sodium-dependent serotonin transporter	1	VLSECKDR	VLSEC(UniMod:4)KDR	2	VLSEC(UniMod:4)KDR2			4757.41
P31652	P31652	SC6A4_RAT	Slc6a4	Sodium-dependent serotonin transporter	1	VLSECKDREDCQENGVLQK	VLSEC(UniMod:4)KDREDC(UniMod:4)QENGVLQK	3	VLSEC(UniMod:4)KDREDC(UniMod:4)QENGVLQK3	11062.5	7620.08	
P31652	P31652	SC6A4_RAT	Slc6a4	Sodium-dependent serotonin transporter	1	VLSECKDREDCQENGVLQK	VLSEC(UniMod:4)KDREDC(UniMod:4)QENGVLQK	4	VLSEC(UniMod:4)KDREDC(UniMod:4)QENGVLQK4	34310.2	42246.2	33269.4
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	VLSECSPLMNDIFNK	VLSEC(UniMod:4)SPLMNDIFNK	2	VLSEC(UniMod:4)SPLMNDIFNK2	49528.4	51777.9	31614.2
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	VLSECSPLMNDIFNK	VLSEC(UniMod:4)SPLMNDIFNK	3	VLSEC(UniMod:4)SPLMNDIFNK3	16223.6	25268	20267.5
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	VLSEEEIDDNFK	VLSEEEIDDNFK	2	VLSEEEIDDNFK2	314372	305766	285671
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	VLSEKPTPEGPEK	VLSEKPTPEGPEK	2	VLSEKPTPEGPEK2	10902.4	14508.8	9701
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	VLSEKPTPEGPEK	VLSEKPTPEGPEK	3	VLSEKPTPEGPEK3	501703	529309	579811
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	VLSEQLSQQTELFAEIER	VLSEQLSQQTELFAEIER	3	VLSEQLSQQTELFAEIER3	4674	2167.32	5088.8
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	VLSFDTLVDNISVDPVTGDLWVGCHPNGMR	VLSFDTLVDNISVDPVTGDLWVGC(UniMod:4)HPNGMR	4	VLSFDTLVDNISVDPVTGDLWVGC(UniMod:4)HPNGMR4	20627.1	27034.4	18810
P53676	P53676	AP3M1_RAT	Ap3m1	AP-3 complex subunit mu-1	1	VLSFIPPDGNFR	VLSFIPPDGNFR	2	VLSFIPPDGNFR2	31436.1	26198.4	28030.6
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	VLSGDLSQLPAGVR	VLSGDLSQLPAGVR	2	VLSGDLSQLPAGVR2	84513.6	80529.1	72654.7
Q5FVF9	Q5FVF9	BTD_RAT	Btd	Biotinidase	1	VLSGDPYCEK	VLSGDPYC(UniMod:4)EK	2	VLSGDPYC(UniMod:4)EK2	347871	273553	301287
Q9WVR3	Q9WVR3	SHIP2_RAT	Inppl1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	VLSGLEILSK	VLSGLEILSK	2	VLSGLEILSK2	20174.1	29227.9	22669.4
Q4FZV2	Q4FZV2	SFT2B_RAT	Sft2d2	Vesicle transport protein SFT2B	1	VLSGQDTEDR	VLSGQDTEDR	2	VLSGQDTEDR2		32562	
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	VLSGSPYYK	VLSGSPYYK	2	VLSGSPYYK2	16754.7	23652.1	21340.4
F1LM66	F1LM66	F1LM66_RAT	Eftud2	116 kDa U5 small nuclear ribonucleoprotein component	1	VLSGTIHAGQPVK	VLSGTIHAGQPVK	3	VLSGTIHAGQPVK3	11977	8393.21	9730.59
Q704E8	Q704E8	ABCB7_RAT	Abcb7	Iron-sulfur clusters transporter ABCB7, mitochondrial	1	VLSGVSFEVPAGK	VLSGVSFEVPAGK	2	VLSGVSFEVPAGK2	26027.4	30139.1	26969.8
D3ZRE7	D3ZRE7	D3ZRE7_RAT	Swap70	Switching B-cell complex subunit SWAP70	1	VLSHNLCTVLK	VLSHNLC(UniMod:4)TVLK	3	VLSHNLC(UniMod:4)TVLK3	6865.62	6334.25	4626.31
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	VLSHQDDTALLK	VLSHQDDTALLK	3	VLSHQDDTALLK3	10261.1	3292.31	3228.44
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	VLSIFPVHGPR	VLSIFPVHGPR	3	VLSIFPVHGPR3	30733.3	32169.5	37955.3
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	VLSIGDGIAR	VLSIGDGIAR	2	VLSIGDGIAR2	3.19744e+06	3.32534e+06	3.59758e+06
Q9JLU4	Q9JLU4	SHAN3_RAT	Shank3	SH3 and multiple ankyrin repeat domains protein 3	1	VLSIGEGGFWEGTVK	VLSIGEGGFWEGTVK	2	VLSIGEGGFWEGTVK2	3324.26		
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	VLSIGLPVAR	VLSIGLPVAR	2	VLSIGLPVAR2	61917.1	74340.3	69190.5
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	VLSLAWEHPFLTHMFCTFQTK	VLSLAWEHPFLTHMFC(UniMod:4)TFQTK	4	VLSLAWEHPFLTHMFC(UniMod:4)TFQTK4	2867.44		1766.35
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	VLSLETSVSELSSQLNESK	VLSLETSVSELSSQLNESK	3	VLSLETSVSELSSQLNESK3	9194.08	8945.35	11842.1
F7F5P9	F7F5P9	F7F5P9_RAT	G3bp2	G3BP stress granule assembly factor 2	1	VLSLNFSECHTK	VLSLNFSEC(UniMod:4)HTK	3	VLSLNFSEC(UniMod:4)HTK3	34952.6	16611	24869.7
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	VLSLQER	VLSLQER	2	VLSLQER2	39741.7	41303.3	59227.7
O88902	O88902	PTN23_RAT	Ptpn23	Tyrosine-protein phosphatase non-receptor type 23 (Fragment)	1	VLSLQFR	VLSLQFR	2	VLSLQFR2	19689	11201.1	14214.4
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	VLSMLKEPPLHEK	VLSMLKEPPLHEK	3	VLSMLKEPPLHEK3		6169.04	
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	VLSMLKEPPLHEK	VLSMLKEPPLHEK	4	VLSMLKEPPLHEK4	2452.66	5836.47	2446.65
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	VLSMTETCR	VLSMTETC(UniMod:4)R	2	VLSMTETC(UniMod:4)R2	269266	245961	283925
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	VLSNEPAASAAEEEVEDDALVR	VLSNEPAASAAEEEVEDDALVR	3	VLSNEPAASAAEEEVEDDALVR3	40080.7	43802.4	37070.8
Q4V8F3	Q4V8F3	RHBL4_RAT	Rhbdd1	Rhomboid-related protein 4	1	VLSNHYCPGGFVNILGFPVPNR	VLSNHYC(UniMod:4)PGGFVNILGFPVPNR	3	VLSNHYC(UniMod:4)PGGFVNILGFPVPNR3		1626.42	
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	VLSNLQR	VLSNLQR	2	VLSNLQR2		55246.7	
A0A0G2K6R0	A0A0G2K6R0	A0A0G2K6R0_RAT	Tnrc6b	Trinucleotide repeat containing adaptor 6B	1	VLSNTGWGQTQIK	VLSNTGWGQTQIK	2	VLSNTGWGQTQIK2	3524.11	4672.87	2873.94
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	VLSNTTTTTR	VLSNTTTTTR	2	VLSNTTTTTR2	10278.5	17223.8	19319.1
A0A8I6AM66	A0A8I6AM66	A0A8I6AM66_RAT	Cdh15	Cadherin 15	1	VLSPASPFLK	VLSPASPFLK	2	VLSPASPFLK2	10115	5332.1	12070.7
P13264	P13264	GLSK_RAT	Gls	Glutaminase kidney isoform, mitochondrial	1	VLSPEAVR	VLSPEAVR	2	VLSPEAVR2	60441.6	40503.4	65380
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VLSPLDR	VLSPLDR	2	VLSPLDR2	102178	107055	94165.5
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VLSPLEYFR	VLSPLEYFR	2	VLSPLEYFR2	3.29321e+06	3.3924e+06	3.36016e+06
O08658	O08658	NUP88_RAT	Nup88	Nuclear pore complex protein Nup88	1	VLSPQKPTITLSAYQR	VLSPQKPTITLSAYQR	3	VLSPQKPTITLSAYQR3	3857.06		5866.17
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	VLSPVDSGNMLVSEGNLYSNK	VLSPVDSGNMLVSEGNLYSNK	3	VLSPVDSGNMLVSEGNLYSNK3	25966.9	27273.1	31600.6
Q6IMX7	Q6IMX7	HPBP1_RAT	Hspbp1	Hsp70-binding protein 1	1	VLSQATPPTAGEAELATDQQER	VLSQATPPTAGEAELATDQQER	3	VLSQATPPTAGEAELATDQQER3	4105.07	3318.25	2377.61
Q9EQG6	Q9EQG6	KDIS_RAT	Kidins220	Kinase D-interacting substrate of 220 kDa	1	VLSQCNIDELK	VLSQC(UniMod:4)NIDELK	2	VLSQC(UniMod:4)NIDELK2		2339.96	5572.74
Q4G017	Q4G017	NISCH_RAT	Nisch	Nischarin	1	VLSQFGER	VLSQFGER	2	VLSQFGER2	14734.9	10589.4	8483.44
P13221	P13221	AATC_RAT	Got1	Aspartate aminotransferase, cytoplasmic	1	VLSQMEK	VLSQMEK	2	VLSQMEK2	54559.1	58080.3	55092.2
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	VLSQPQLR	VLSQPQLR	2	VLSQPQLR2	61449.7	73041.8	63352.6
A0A8I5ZTN5	A0A8I5ZTN5	A0A8I5ZTN5_RAT	Adsl	Adenylosuccinate lyase	1	VLSQQAAAVVK	VLSQQAAAVVK	2	VLSQQAAAVVK2	35835.4	38178.4	35947.1
Q5XIH7	Q5XIH7	PHB2_RAT	Phb2	Prohibitin-2	1	VLSRPNAQELPSMYQR	VLSRPNAQELPSMYQR	3	VLSRPNAQELPSMYQR3	308811	318129	315134
G3V9A3	Q5EBB0;G3V9A3	G3V9A3_RAT	Sfn	Stratifin	0	VLSSIEQK	VLSSIEQK	2	VLSSIEQK2	1.98152e+07	2.01885e+07	2.05359e+07
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	VLSSIISSLDLLPYGLR	VLSSIISSLDLLPYGLR	2	VLSSIISSLDLLPYGLR2	1157.98	12325.2	3817.01
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	VLSSIRVPIIVPVMMLAIK	VLSSIRVPIIVPVMMLAIK	3	VLSSIRVPIIVPVMMLAIK3		4940.22	
Q6AYT7	Q6AYT7	ABD12_RAT	Abhd12	Lysophosphatidylserine lipase ABHD12	1	VLSSLGYHVVTFDYR	VLSSLGYHVVTFDYR	3	VLSSLGYHVVTFDYR3	24928.4	25932.1	28630.1
A0A8I6AIT8	A0A8I6AIT8	A0A8I6AIT8_RAT	Msto1	Misato mitochondrial distribution and morphology regulator 1	1	VLSSSYLLLTPCK	VLSSSYLLLTPC(UniMod:4)K	2	VLSSSYLLLTPC(UniMod:4)K2	4832.24	5027.49	4146.48
A0A0G2JZU8	A0A0G2JZU8	A0A0G2JZU8_RAT	Usp9y	ubiquitinyl hydrolase 1	1	VLSSVSYYTHR	VLSSVSYYTHR	2	VLSSVSYYTHR2	13028.7		
D3ZD05	D3ZD05	KANK2_RAT	Kank2	KN motif and ankyrin repeat domain-containing protein 2	1	VLSTAEGPQLRPLGPAVGK	VLSTAEGPQLRPLGPAVGK	3	VLSTAEGPQLRPLGPAVGK3	9590.6	3943.43	
B5DFL3	B5DFL3	B5DFL3_RAT	Itgb1bp1	Integrin subunit beta 1 binding protein 1	1	VLSTAFDSVLTSDKS	VLSTAFDSVLTSDKS	2	VLSTAFDSVLTSDKS2	3725.08		5362.36
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	VLSTPDLEVR	VLSTPDLEVR	2	VLSTPDLEVR2	455403	550184	506060
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	VLSTSTDLEAAVADALK	VLSTSTDLEAAVADALK	3	VLSTSTDLEAAVADALK3	4933.54		
Q32PX2	Q32PX2	AIMP2_RAT	Aimp2	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2	1	VLSTVHTHSSVK	VLSTVHTHSSVK	2	VLSTVHTHSSVK2	7657.57		3411.08
Q32PX2	Q32PX2	AIMP2_RAT	Aimp2	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2	1	VLSTVHTHSSVK	VLSTVHTHSSVK	3	VLSTVHTHSSVK3	28902.1		43878.5
Q5BJP3	Q5BJP3	UFM1_RAT	Ufm1	Ubiquitin-fold modifier 1	1	VLSVPESTPFTAVLK	VLSVPESTPFTAVLK	2	VLSVPESTPFTAVLK2	146214	143420	143706
Q5BJP3	Q5BJP3	UFM1_RAT	Ufm1	Ubiquitin-fold modifier 1	1	VLSVPESTPFTAVLK	VLSVPESTPFTAVLK	3	VLSVPESTPFTAVLK3	10312	9950.1	15761.7
P18297	P18297	SPRE_RAT	Spr	Sepiapterin reductase	1	VLSYAPGPLDTNMQQLAR	VLSYAPGPLDTNMQQLAR	3	VLSYAPGPLDTNMQQLAR3	2277.67	2645.55	2435.25
A0A8I5ZNG4	A0A8I5ZNG4	A0A8I5ZNG4_RAT	Rictor	RPTOR independent companion of MTOR, complex 2	1	VLTAATDACR	VLTAATDAC(UniMod:4)R	2	VLTAATDAC(UniMod:4)R2	4988.84	4679.61	5114.34
G3V9I7	G3V9I7	G3V9I7_RAT	Adck5	AarF domain containing kinase 5	1	VLTADFCDGCK	VLTADFC(UniMod:4)DGC(UniMod:4)K	2	VLTADFC(UniMod:4)DGC(UniMod:4)K2	4144.84	803.759	2561.61
F1LRL4	F1LRL4;A0A8I5ZNC8	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	0	VLTAYAFR	VLTAYAFR	2	VLTAYAFR2	32523.5	34731.6	31337.8
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	VLTCIMSGSPSAK	VLTC(UniMod:4)IMSGSPSAK	2	VLTC(UniMod:4)IMSGSPSAK2	214756	250388	217334
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	VLTDELK	VLTDELK	1	VLTDELK1	7224.07	8236.4	2489.5
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	VLTDELK	VLTDELK	2	VLTDELK2	701465	728699	668493
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	VLTDHWSIPYK	VLTDHWSIPYK	3	VLTDHWSIPYK3	100634	109044	76472.9
F1LSX7	F1LSX7	F1LSX7_RAT	Exosc5	Exosome component 5	1	VLTDTGTESSPR	VLTDTGTESSPR	2	VLTDTGTESSPR2			2391.19
P05369	A0A8I6A397;P05369	FPPS_RAT	Fdps	Farnesyl pyrophosphate synthase	0	VLTEDELGHPEK	VLTEDELGHPEK	2	VLTEDELGHPEK2	6490.97	4878.23	6042.65
P05369	A0A8I6A397;P05369	FPPS_RAT	Fdps	Farnesyl pyrophosphate synthase	0	VLTEDELGHPEK	VLTEDELGHPEK	3	VLTEDELGHPEK3	63147	53076.7	62387.5
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	VLTEEELK	VLTEEELK	2	VLTEEELK2	134713	100655	143292
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	VLTEFTR	VLTEFTR	2	VLTEFTR2	109461	104355	119725
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	VLTFAYK	VLTFAYK	2	VLTFAYK2	176352	159987	172491
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	VLTFLDSHCECNER	VLTFLDSHC(UniMod:4)EC(UniMod:4)NER	2	VLTFLDSHC(UniMod:4)EC(UniMod:4)NER2	14531.2	5822.55	3550.14
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	VLTFLDSHCECNER	VLTFLDSHC(UniMod:4)EC(UniMod:4)NER	3	VLTFLDSHC(UniMod:4)EC(UniMod:4)NER3	193054	138797	178310
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	VLTGDALFELNYGQEVWLR	VLTGDALFELNYGQEVWLR	3	VLTGDALFELNYGQEVWLR3	35746.1	50917.8	39464.3
A0A0G2K098	A0A0G2K098	A0A0G2K098_RAT	Mcc	MCC regulator of WNT signaling pathway	1	VLTGLESVVCGR	VLTGLESVVC(UniMod:4)GR	2	VLTGLESVVC(UniMod:4)GR2	5759.12	1936.28	9071.87
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	VLTGNTIALVLGGGGAR	VLTGNTIALVLGGGGAR	2	VLTGNTIALVLGGGGAR2	2912.19	9492.9	4072.32
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	VLTGVAGEDAECHAAK	VLTGVAGEDAEC(UniMod:4)HAAK	2	VLTGVAGEDAEC(UniMod:4)HAAK2	2234.51	2126.69	
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	VLTGVAGEDAECHAAK	VLTGVAGEDAEC(UniMod:4)HAAK	3	VLTGVAGEDAEC(UniMod:4)HAAK3	30861.2	17654.2	20288.8
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	VLTHIDHSLSR	VLTHIDHSLSR	2	VLTHIDHSLSR2	1337.11		
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	VLTHIDHSLSR	VLTHIDHSLSR	3	VLTHIDHSLSR3	10044.5	10519.4	18285.1
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	VLTIDPTEFK	VLTIDPTEFK	2	VLTIDPTEFK2	156938	180165	173271
Q02353	Q02353	NDST1_RAT	Ndst1	Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1	1	VLTILINPADR	VLTILINPADR	2	VLTILINPADR2	8260.48	9730.89	6334.8
Q6F596	Q6F596	GGPPS_RAT	Ggps1	Geranylgeranyl pyrophosphate synthase	1	VLTLDHPDAVK	VLTLDHPDAVK	2	VLTLDHPDAVK2		904.174	4608.63
Q6F596	Q6F596	GGPPS_RAT	Ggps1	Geranylgeranyl pyrophosphate synthase	1	VLTLDHPDAVK	VLTLDHPDAVK	3	VLTLDHPDAVK3	18551.3	24039.6	25300.1
D4A447	D4A447	D4A447_RAT	Cd109	CD109 molecule	1	VLTLFSDLKPYK	VLTLFSDLKPYK	3	VLTLFSDLKPYK3	8635.23	3677.06	3171.07
Q9Z2H4	Q9Z2H4	LGR4_RAT	Lgr4	Leucine-rich repeat-containing G-protein coupled receptor 4	1	VLTLQNNQLR	VLTLQNNQLR	2	VLTLQNNQLR2	1851.45	3323.85	4371.8
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VLTLSEDSPYETLHSFISNAVAPFFK	VLTLSEDSPYETLHSFISNAVAPFFK	3	VLTLSEDSPYETLHSFISNAVAPFFK3		8878.96	6489.55
Q4KM98	Q4KM98	MFF_RAT	Mff	Mitochondrial fission factor	1	VLTLSERPLDFLDLERPPPTPQSEEIR	VLTLSERPLDFLDLERPPPTPQSEEIR	4	VLTLSERPLDFLDLERPPPTPQSEEIR4	53220.6	46879.4	58851.6
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	VLTNHIHTGHHSSMFWMR	VLTNHIHTGHHSSMFWMR	4	VLTNHIHTGHHSSMFWMR4	8218.26	3049.36	4371.28
A0JPM9	A0JPM9	EIF3J_RAT	Eif3j	Eukaryotic translation initiation factor 3 subunit J	1	VLTPEEQLADK	VLTPEEQLADK	2	VLTPEEQLADK2	329153	310509	275795
A0JPM9	A0JPM9	EIF3J_RAT	Eif3j	Eukaryotic translation initiation factor 3 subunit J	1	VLTPEEQLADKLR	VLTPEEQLADKLR	2	VLTPEEQLADKLR2	9174.82	15530.3	9266.51
A0JPM9	A0JPM9	EIF3J_RAT	Eif3j	Eukaryotic translation initiation factor 3 subunit J	1	VLTPEEQLADKLR	VLTPEEQLADKLR	3	VLTPEEQLADKLR3	141462	273317	219320
P07335	P07335	KCRB_RAT	Ckb	Creatine kinase B-type	1	VLTPELYAELR	VLTPELYAELR	2	VLTPELYAELR2	75461.9	72089	57367.4
P31044	P31044	PEBP1_RAT	Pebp1	Phosphatidylethanolamine-binding protein 1	1	VLTPTQVMNRPSSISWDGLDPGK	VLTPTQVMNRPSSISWDGLDPGK	3	VLTPTQVMNRPSSISWDGLDPGK3	16839.5	26967.3	18903.4
A0A8I6AVP7	A0A8I6AVP7	A0A8I6AVP7_RAT	Odr4	Protein odr-4 homolog	1	VLTQLLLNSDHR	VLTQLLLNSDHR	3	VLTQLLLNSDHR3	4770.31	3735.62	8172.61
O70436	O70436	SMAD2_RAT	Smad2	Mothers against decapentaplegic homolog 2	1	VLTQMGSPSVR	VLTQMGSPSVR	2	VLTQMGSPSVR2	9060.72	8618.77	11245.2
A0A0G2K9P5	A0A0G2K9P5	A0A0G2K9P5_RAT	Cog5	Conserved oligomeric Golgi complex subunit 5	1	VLTQPSQSAAR	VLTQPSQSAAR	2	VLTQPSQSAAR2	62073.3	76824.4	48878.3
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	VLTSAFSR	VLTSAFSR	2	VLTSAFSR2	85654.5	87274.8	59564
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	VLTSEEEYSLLSDK	VLTSEEEYSLLSDK	2	VLTSEEEYSLLSDK2	36869.6	36473.2	31001.7
P43245	P43245	MDR1_RAT	Abcb1	ATP-dependent translocase ABCB1	1	VLTSFTNK	VLTSFTNK	2	VLTSFTNK2	25921.5	29283.6	33648
Q63803	Q63803	GNAS1_RAT	Gnas	Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas	1	VLTSGIFETK	VLTSGIFETK	2	VLTSGIFETK2	176652	180490	181900
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	VLTSQLQACR	VLTSQLQAC(UniMod:4)R	2	VLTSQLQAC(UniMod:4)R2	10992.3	7803	8401.88
D3ZYT6	D3ZYT6	D3ZYT6_RAT	Treml1	Triggering receptor expressed on myeloid cells-like 1	1	VLTSSKPVTYATVVFPGR	VLTSSKPVTYATVVFPGR	2	VLTSSKPVTYATVVFPGR2	166419	148574	168951
D3ZYT6	D3ZYT6	D3ZYT6_RAT	Treml1	Triggering receptor expressed on myeloid cells-like 1	1	VLTSSKPVTYATVVFPGR	VLTSSKPVTYATVVFPGR	3	VLTSSKPVTYATVVFPGR3	3.19966e+06	3.56019e+06	3.79402e+06
D3ZYT6	D3ZYT6	D3ZYT6_RAT	Treml1	Triggering receptor expressed on myeloid cells-like 1	1	VLTSSKPVTYATVVFPGR	VLTSSKPVTYATVVFPGR	4	VLTSSKPVTYATVVFPGR4	67423.4	71960.9	85297.4
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	VLTTAGSYVR	VLTTAGSYVR	2	VLTTAGSYVR2	144674	128969	132303
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	VLTTGYWPTQSATPK	VLTTGYWPTQSATPK	2	VLTTGYWPTQSATPK2	31979.8	29004	39886.5
Q9WVR7	Q9WVR7	PPM1F_RAT	Ppm1f	Protein phosphatase 1F	1	VLTTLLDAK	VLTTLLDAK	2	VLTTLLDAK2	30270.4	21907.6	19865.7
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	VLTTTALSTVSSGAQR	VLTTTALSTVSSGAQR	2	VLTTTALSTVSSGAQR2	15414.4	18277.5	12548.9
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	VLTTTALSTVSSGAQR	VLTTTALSTVSSGAQR	3	VLTTTALSTVSSGAQR3	16514.7	22867	18742.9
A0A8I6AS56	A0A8I6AS56	A0A8I6AS56_RAT	Abhd11	Abhydrolase domain containing 11	1	VLTVDAR	VLTVDAR	2	VLTVDAR2	22636.9	23662.5	20841.2
P17078	P17078;D3ZN79	RL35_RAT	Rpl35	Large ribosomal subunit protein uL29	0	VLTVINQTQK	VLTVINQTQK	2	VLTVINQTQK2	16959.7	18651.7	8095.58
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	VLTVPCQK	VLTVPC(UniMod:4)QK	2	VLTVPC(UniMod:4)QK2	239337	214598	214090
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	VLTVQSEKEEVTQEVAR	VLTVQSEKEEVTQEVAR	3	VLTVQSEKEEVTQEVAR3	18361.6	14257.4	14108.4
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	VLTVTAVR	VLTVTAVR	2	VLTVTAVR2	31244.8	20594.7	15478.8
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	VLTVVEASVNPISK	VLTVVEASVNPISK	2	VLTVVEASVNPISK2	188419	180909	167696
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	VLTVVEASVNPISK	VLTVVEASVNPISK	3	VLTVVEASVNPISK3	33041	32504.6	34219.3
A0A8J8Y8E0	A0A8J8Y8E0	A0A8J8Y8E0_RAT	Fibp	FGF1 intracellular binding protein	1	VLVADKDLLDLHK	VLVADKDLLDLHK	3	VLVADKDLLDLHK3	13132.6	9684.35	9720.74
Q69BT7	Q69BT7	TPPC4_RAT	Trappc4	Trafficking protein particle complex subunit 4	1	VLVAFGQR	VLVAFGQR	2	VLVAFGQR2	95766.5	65269.2	61975
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	VLVALASEELAK	VLVALASEELAK	2	VLVALASEELAK2	45615.7	49019.7	53165.5
A0A8I5ZT87	A0A8I5ZT87	A0A8I5ZT87_RAT	Mycbp	Myc binding protein	1	VLVALYEEPEKPTSALDFLK	VLVALYEEPEKPTSALDFLK	3	VLVALYEEPEKPTSALDFLK3	91258.4	57196.4	64412.2
P13803	P13803	ETFA_RAT	Etfa	Electron transfer flavoprotein subunit alpha, mitochondrial	1	VLVAQHDAYK	VLVAQHDAYK	2	VLVAQHDAYK2	19653.2	20760.9	17388.8
P13803	P13803	ETFA_RAT	Etfa	Electron transfer flavoprotein subunit alpha, mitochondrial	1	VLVAQHDAYK	VLVAQHDAYK	3	VLVAQHDAYK3	197059	168301	187717
D3ZYT2	D3ZYT2	D3ZYT2_RAT	Mrps5	Mitochondrial ribosomal protein S5	1	VLVAVGNGNGAAGFAVGK	VLVAVGNGNGAAGFAVGK	2	VLVAVGNGNGAAGFAVGK2	4288.21		
Q6V0K7	Q6V0K7	OIT3_RAT	Oit3	Oncoprotein-induced transcript 3 protein	1	VLVCGVLDER	VLVC(UniMod:4)GVLDER	2	VLVC(UniMod:4)GVLDER2	39576.4	32841.4	30230
D3ZQL1	D3ZQL1	D3ZQL1_RAT	Emc7	ER membrane protein complex subunit 7	1	VLVDGEEHVGFLK	VLVDGEEHVGFLK	3	VLVDGEEHVGFLK3	94880.8	111420	91151.2
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VLVDGVLQYLPFQAAGGK	VLVDGVLQYLPFQAAGGK	2	VLVDGVLQYLPFQAAGGK2	952285	882857	941604
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VLVDGVLQYLPFQAAGGK	VLVDGVLQYLPFQAAGGK	3	VLVDGVLQYLPFQAAGGK3	117021	114582	118245
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VLVDHFGYTK	VLVDHFGYTK	2	VLVDHFGYTK2	547757	545547	489431
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VLVDHFGYTK	VLVDHFGYTK	3	VLVDHFGYTK3	6.81374e+06	7.70297e+06	7.60151e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VLVDHFGYTKDDK	VLVDHFGYTKDDK	3	VLVDHFGYTKDDK3	20870.7	24101.6	18787.6
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VLVDHFGYTKDDK	VLVDHFGYTKDDK	4	VLVDHFGYTKDDK4	3901.13	7384.56	10544.5
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	VLVDMSR	VLVDMSR	2	VLVDMSR2	479991	534734	615262
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	VLVDPATYGQFYGGDSYIILYNYR	VLVDPATYGQFYGGDSYIILYNYR	3	VLVDPATYGQFYGGDSYIILYNYR3	187145	320473	193228
B5DF91	B5DF91	ELAV1_RAT	Elavl1	ELAV-like protein 1	1	VLVDQTTGLSR	VLVDQTTGLSR	2	VLVDQTTGLSR2	29169.7	20304.5	25625.2
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	VLVDVATFPVYTMGAIPIVCK	VLVDVATFPVYTMGAIPIVC(UniMod:4)K	3	VLVDVATFPVYTMGAIPIVC(UniMod:4)K3	50943.9	40861.6	45729.3
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	VLVEDTK	VLVEDTK	1	VLVEDTK1	30650.3	20361.6	26727.4
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	VLVEDTK	VLVEDTK	2	VLVEDTK2	27737.2	37686	31734.3
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	VLVEEPPPGLVPGVSIR	VLVEEPPPGLVPGVSIR	2	VLVEEPPPGLVPGVSIR2	25822.8	26490.5	20583.3
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VLVENEHR	VLVENEHR	2	VLVENEHR2		10678.4	
A0A8I5Y0Y2	A0A8I5Y0Y2	A0A8I5Y0Y2_RAT	Ddi2	DNA damage inducible 1 homolog 2	1	VLVEQQQDR	VLVEQQQDR	2	VLVEQQQDR2	16619.2	8382.52	5407.69
Q04631	Q04631	FNTA_RAT	Fnta	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha	1	VLVEWLK	VLVEWLK	2	VLVEWLK2	11656.3	8682.55	
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	VLVFPRPVCLEPGLSYK	VLVFPRPVC(UniMod:4)LEPGLSYK	3	VLVFPRPVC(UniMod:4)LEPGLSYK3	2540.33		8832.58
A0A8I5ZKD4	A0A8I5ZKD4	A0A8I5ZKD4_RAT	Nhlrc3	NHL repeat containing 3	1	VLVFSEDGYFLR	VLVFSEDGYFLR	2	VLVFSEDGYFLR2	21515.8	19860.1	15535.5
A0A8I5ZTN9	A0A8I5ZTN9	A0A8I5ZTN9_RAT	Ifi27	Interferon, alpha-inducible protein 27	1	VLVGSTGSAVVASVMGVCK	VLVGSTGSAVVASVMGVC(UniMod:4)K	2	VLVGSTGSAVVASVMGVC(UniMod:4)K2	8512.83	7241.07	5452.81
A0A8I5ZTN9	A0A8I5ZTN9	A0A8I5ZTN9_RAT	Ifi27	Interferon, alpha-inducible protein 27	1	VLVGSTGSAVVASVMGVCK	VLVGSTGSAVVASVMGVC(UniMod:4)K	3	VLVGSTGSAVVASVMGVC(UniMod:4)K3	20452.7	12305.3	8219.38
M0RAD5	M0RAD5	M0RAD5_RAT	Clpp	ATP-dependent Clp protease proteolytic subunit	1	VLVHPPQDGEDEPELVQK	VLVHPPQDGEDEPELVQK	3	VLVHPPQDGEDEPELVQK3	66331.8	60267.9	80403.6
Q68FT9	Q68FT9	SCLY_RAT	Scly	Selenocysteine lyase	1	VLVHTDAAQALGK	VLVHTDAAQALGK	3	VLVHTDAAQALGK3	1624.61		
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	VLVIENK	VLVIENK	2	VLVIENK2	50682.9	43120.2	34726
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	VLVIGAHGPLEAALQCLFQR	VLVIGAHGPLEAALQC(UniMod:4)LFQR	3	VLVIGAHGPLEAALQC(UniMod:4)LFQR3	7096.73	5212.55	4060.82
G3V918	G3V918	G3V918_RAT	Gart	Trifunctional purine biosynthetic protein adenosine-3	1	VLVIGSGGR	VLVIGSGGR	2	VLVIGSGGR2	38479.1	22889.7	40604.8
A0A8I6AAA9	A0A8I6AAA9	A0A8I6AAA9_RAT	Lrch1	Leucine rich repeats and calponin homology domain containing 1	1	VLVIPVCFR	VLVIPVC(UniMod:4)FR	2	VLVIPVC(UniMod:4)FR2	53628.5	62529.2	64360.3
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	VLVLDDTNHER	VLVLDDTNHER	2	VLVLDDTNHER2	16442.4	7678.23	11348.5
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	VLVLDDTNHER	VLVLDDTNHER	3	VLVLDDTNHER3	108184	96169	95357.6
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	VLVLDDTNHERER	VLVLDDTNHERER	3	VLVLDDTNHERER3	27852.8	23548.6	23760.7
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	VLVLDDTNHERER	VLVLDDTNHERER	4	VLVLDDTNHERER4	29809.7	38055.9	37160.9
A0A8I5ZZK5	A0A8I5ZZK5	A0A8I5ZZK5_RAT	Bank1	B-cell scaffold protein with ankyrin repeats 1	1	VLVLPGEISCESPGEISILLK	VLVLPGEISC(UniMod:4)ESPGEISILLK	3	VLVLPGEISC(UniMod:4)ESPGEISILLK3	7816	3794.99	8233
Q4QQT4	Q4QQT4	2AAB_RAT	Ppp2r1b	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	1	VLVMANDPNYLHR	VLVMANDPNYLHR	3	VLVMANDPNYLHR3	13602.5	3135.46	17464.3
P47861	P47861	SYT5_RAT	Syt5	Synaptotagmin-5	1	VLVMAVYDFDR	VLVMAVYDFDR	2	VLVMAVYDFDR2	15476	13645.8	15435.4
Q6AYS6	Q6AYS6	SNX17_RAT	Snx17	Sorting nexin-17	1	VLVNVLTSDQTEDVLEAVAAK	VLVNVLTSDQTEDVLEAVAAK	3	VLVNVLTSDQTEDVLEAVAAK3	3080.78	6192.25	2909.37
B1WBV3	B1WBV3	B1WBV3_RAT	Gfod2	Glucose-fructose oxidoreductase domain containing 2	1	VLVPLLR	VLVPLLR	2	VLVPLLR2	13298.9	8379.56	15501.1
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	VLVPPNIEPGPVNK	VLVPPNIEPGPVNK	2	VLVPPNIEPGPVNK2	84771.8	78813.1	91240.1
Q09326	Q09326	MGAT2_RAT	Mgat2	Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	1	VLVPQAPR	VLVPQAPR	2	VLVPQAPR2	80967.8	67893.2	82165.4
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	VLVQMCK	VLVQMC(UniMod:4)K	2	VLVQMC(UniMod:4)K2	109271	88987.6	64672.8
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	VLVQNAAGSQEK	VLVQNAAGSQEK	2	VLVQNAAGSQEK2	7415.07	2.73879e+06	2.75089e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	VLVQNAAGSQEK	VLVQNAAGSQEK	3	VLVQNAAGSQEK3	10839.8	16523.5	9275.96
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	VLVQVREEEPEAMLPGAQPTLISAISK	VLVQVREEEPEAMLPGAQPTLISAISK	3	VLVQVREEEPEAMLPGAQPTLISAISK3	9133.38	9392.17	7925.9
Q5M849	Q5M849	Q5M849_RAT	Ifi35	Interferon-induced protein 35	1	VLVSGFPTGLR	VLVSGFPTGLR	2	VLVSGFPTGLR2	89529.6	85564.8	92384.9
A0A8I5ZUJ7	A0A8I5ZUJ7	A0A8I5ZUJ7_RAT	Ibtk	Inhibitor of Bruton tyrosine kinase	1	VLVSGGCMEYK	VLVSGGC(UniMod:4)MEYK	2	VLVSGGC(UniMod:4)MEYK2	2010.7		
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	VLVSGQECK	VLVSGQEC(UniMod:4)K	2	VLVSGQEC(UniMod:4)K2	64019.6	57988.2	76001.4
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	VLVSPTNPPGATSSCQK	VLVSPTNPPGATSSC(UniMod:4)QK	2	VLVSPTNPPGATSSC(UniMod:4)QK2	247425	280912	262120
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	VLVSPTNPPGATSSCQK	VLVSPTNPPGATSSC(UniMod:4)QK	3	VLVSPTNPPGATSSC(UniMod:4)QK3	78733	78609.5	97020.8
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	VLVTEAGVTASAWILSAK	VLVTEAGVTASAWILSAK	3	VLVTEAGVTASAWILSAK3	5620.58	9965.31	8701.02
O08775	O08775	VGFR2_RAT	Kdr	Vascular endothelial growth factor receptor 2	1	VLVTECGDSIFCK	VLVTEC(UniMod:4)GDSIFC(UniMod:4)K	2	VLVTEC(UniMod:4)GDSIFC(UniMod:4)K2	13738	15537.1	8589.16
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	VLVTHQTGPDEDNPK	VLVTHQTGPDEDNPK	2	VLVTHQTGPDEDNPK2	2157.76	3193.78	1033.52
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	VLVTHQTGPDEDNPK	VLVTHQTGPDEDNPK	3	VLVTHQTGPDEDNPK3	147709	119446	148338
A0A8I6GAE6	A0A8I6GAE6	A0A8I6GAE6_RAT	Ddx19b	RNA helicase	1	VLVTTNVCAR	VLVTTNVC(UniMod:4)AR	2	VLVTTNVC(UniMod:4)AR2	26931.3	14768.4	13333.5
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	VLVTVFQR	VLVTVFQR	2	VLVTVFQR2	26251.3	26171.7	21568.5
O08774	O08774	RGS12_RAT	Rgs12	Regulator of G-protein signaling 12	1	VLVVDLGGGSSR	VLVVDLGGGSSR	2	VLVVDLGGGSSR2	9651.18	8697.48	14844
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	VLVVDQLSMR	VLVVDQLSMR	2	VLVVDQLSMR2	63855.4	50710.7	53219.4
A0A8I5ZU42	A0A8I5ZU42	A0A8I5ZU42_RAT	ENSRNOG00000064024	THIF-type NAD/FAD binding fold domain-containing protein	1	VLVVGAGGIGCELLK	VLVVGAGGIGC(UniMod:4)ELLK	2	VLVVGAGGIGC(UniMod:4)ELLK2	9634.07		9698.42
Q63481	Q63481	RAB7L_RAT	Rab29	Ras-related protein Rab-7L1	1	VLVVGDAAVGK	VLVVGDAAVGK	2	VLVVGDAAVGK2	45686.1	49716	55397.9
P47858	P47858	PFKAM_RAT	Pfkm	ATP-dependent 6-phosphofructokinase, muscle type	1	VLVVHDGFEGLAK	VLVVHDGFEGLAK	3	VLVVHDGFEGLAK3	48856.4	62115.1	69756.5
P08541	P08541	UD2B2_RAT	Ugt2b	UDP-glucuronosyltransferase 2B2	1	VLVWPMDFSHWMNIK	VLVWPMDFSHWMNIK	3	VLVWPMDFSHWMNIK3	3911.72	3183.08	
P36511	P36511	UDB15_RAT	Ugt2b15	UDP-glucuronosyltransferase 2B15	1	VLVWPMEYSHWMNIK	VLVWPMEYSHWMNIK	3	VLVWPMEYSHWMNIK3	7406.62	8021.74	16591.4
Q9QYP1	Q9QYP1	LRP4_RAT	Lrp4	Low-density lipoprotein receptor-related protein 4	1	VLVWQNLDSPR	VLVWQNLDSPR	2	VLVWQNLDSPR2		6719.86	3610.22
D3ZCQ2	A0A8I6G3G9;D3ZCQ2	D3ZCQ2_RAT	Alg11	GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase	0	VLWCALR	VLWC(UniMod:4)ALR	2	VLWC(UniMod:4)ALR2	19374.6	28045.1	14745.8
Q769K2	Q769K2	NAPEP_RAT	Napepld	N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D	1	VLWGSWSVLGPWNR	VLWGSWSVLGPWNR	2	VLWGSWSVLGPWNR2	20006.1	28170.2	21250.1
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	VLWLDEIQQAINEANVDK	VLWLDEIQQAINEANVDK	3	VLWLDEIQQAINEANVDK3	4371.55	3883.34	1451.72
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	VLWLDEIQQAINEANVDKNR	VLWLDEIQQAINEANVDKNR	3	VLWLDEIQQAINEANVDKNR3	49559.7	47590.9	63673.7
P29315	P29315	RINI_RAT	Rnh1	Ribonuclease inhibitor	1	VLWLGDCDVTDSGCSSLATVLLANR	VLWLGDC(UniMod:4)DVTDSGC(UniMod:4)SSLATVLLANR	3	VLWLGDC(UniMod:4)DVTDSGC(UniMod:4)SSLATVLLANR3	8152.28	13309	7245.8
Q6AYK3	Q6AYK3	INO1_RAT	Isyna1	Inositol-3-phosphate synthase 1	1	VLYAPGEEPDHCVVIK	VLYAPGEEPDHC(UniMod:4)VVIK	3	VLYAPGEEPDHC(UniMod:4)VVIK3	24518	18786.6	26031.7
D4ADS4	A0A8I6AQS8;D4ADS4	D4ADS4_RAT	Mgst3	Microsomal glutathione S-transferase 3	0	VLYAYGYYTGDPSK	VLYAYGYYTGDPSK	2	VLYAYGYYTGDPSK2	256373	251314	285181
D4ADS4	A0A8I6AQS8;D4ADS4	D4ADS4_RAT	Mgst3	Microsomal glutathione S-transferase 3	0	VLYAYGYYTGDPSK	VLYAYGYYTGDPSK	3	VLYAYGYYTGDPSK3	31839.2	54161	28178.9
D4ADS4	A0A8I6AQS8;D4ADS4	D4ADS4_RAT	Mgst3	Microsomal glutathione S-transferase 3	0	VLYAYGYYTGDPSKR	VLYAYGYYTGDPSKR	2	VLYAYGYYTGDPSKR2	11362	16814.4	13107
D4ADS4	A0A8I6AQS8;D4ADS4	D4ADS4_RAT	Mgst3	Microsomal glutathione S-transferase 3	0	VLYAYGYYTGDPSKR	VLYAYGYYTGDPSKR	3	VLYAYGYYTGDPSKR3	172141	193778	210058
Q5XIF5	Q5XIF5	DEGS1_RAT	Degs1	Sphingolipid delta(4)-desaturase DES1	1	VLYDFVMDDTISPYSR	VLYDFVMDDTISPYSR	2	VLYDFVMDDTISPYSR2	34017.1	43918.8	36059.5
Q5XIF5	Q5XIF5	DEGS1_RAT	Degs1	Sphingolipid delta(4)-desaturase DES1	1	VLYDFVMDDTISPYSR	VLYDFVMDDTISPYSR	3	VLYDFVMDDTISPYSR3	18545	13498.2	15104.6
D3ZAI6	D3ZAI6	D3ZAI6_RAT	Nt5dc3	5'-nucleotidase domain containing 3	1	VLYFGDHIYSDLADLTLK	VLYFGDHIYSDLADLTLK	3	VLYFGDHIYSDLADLTLK3		7683.84	7430.48
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	VLYFGDHLYSDLADLMLR	VLYFGDHLYSDLADLMLR	3	VLYFGDHLYSDLADLMLR3		2791.33	3069.72
D3ZCJ3	D3ZCJ3	D3ZCJ3_RAT	Mfsd6	Major facilitator superfamily domain containing 6	1	VLYIGLACNTAR	VLYIGLAC(UniMod:4)NTAR	2	VLYIGLAC(UniMod:4)NTAR2	9813.82	8951.54	7674.87
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	VLYLHSR	VLYLHSR	2	VLYLHSR2	27179.2	24008.3	16678.5
B0BN30	B0BN30	B0BN30_RAT	Mtch1	Mitochondrial carrier 1	1	VLYLPSFFTYAK	VLYLPSFFTYAK	2	VLYLPSFFTYAK2	33761.2	22828.2	34854.4
Q9QUR2	Q9QUR2	DCTN4_RAT	Dctn4	Dynactin subunit 4	1	VLYLVQGEK	VLYLVQGEK	2	VLYLVQGEK2	177888	143358	192594
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	VLYNDLGAQVTEGK	VLYNDLGAQVTEGK	2	VLYNDLGAQVTEGK2	147161	169594	152484
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	VLYNLEVLSSK	VLYNLEVLSSK	2	VLYNLEVLSSK2	46106.5	40472	46227.3
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	VLYNPLHAHGQK	VLYNPLHAHGQK	3	VLYNPLHAHGQK3	74497.8	79013	54962.2
P09811	P53534;P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	0	VLYPNDNFFEGK	VLYPNDNFFEGK	2	VLYPNDNFFEGK2	294641	259053	280321
Q5CZZ9	Q5CZZ9	PI51B_RAT	Pip5k1b	Phosphatidylinositol 4-phosphate 5-kinase type-1 beta	1	VLYSTAMESIQGPGK	VLYSTAMESIQGPGK	2	VLYSTAMESIQGPGK2	12898	12719.8	9482.53
B2RYM5	B2RYM5	BRCC3_RAT	Brcc3	Lys-63-specific deubiquitinase BRCC36	1	VLYTCFQSVQAQK	VLYTC(UniMod:4)FQSVQAQK	2	VLYTC(UniMod:4)FQSVQAQK2	4700.31	4962.46	6034.38
A0A0G2KB09	A0A0G2KB09	A0A0G2KB09_RAT	Parvb	Parvin, beta	1	VLYTLFTK	VLYTLFTK	2	VLYTLFTK2	597870	585991	726571
Q3ZAV8	Q3ZAV8	EDC4_RAT	Edc4	Enhancer of mRNA-decapping protein 4	1	VLYVMELLQNQDEGR	VLYVMELLQNQDEGR	2	VLYVMELLQNQDEGR2	5343.47	3737.68	3402.94
O70196	O70196	PPCE_RAT	Prep	Prolyl endopeptidase	1	VLYVQDSLEGEAR	VLYVQDSLEGEAR	2	VLYVQDSLEGEAR2	1776.88	3567.76	
Q9WU74	Q9WU74	LSR_RAT	Lsr	Lipolysis-stimulated lipoprotein receptor	1	VLYYMEK	VLYYMEK	2	VLYYMEK2	4091.38		
Q07803	Q07803	EFGM_RAT	Gfm1	Elongation factor G, mitochondrial	1	VLYYTGR	VLYYTGR	2	VLYYTGR2	10481.1	18343.8	13230.5
F1M9D6	F1M9D6	F1M9D6_RAT	Stat1	Signal transducer and activator of transcription	1	VMAAENIPENPLK	VMAAENIPENPLK	2	VMAAENIPENPLK2	21545.5	10347.6	14221.1
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	VMACEPPALVELVAAVR	VMAC(UniMod:4)EPPALVELVAAVR	2	VMAC(UniMod:4)EPPALVELVAAVR2	11061.4	13081.2	11428.9
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	VMACEPPALVELVAAVR	VMAC(UniMod:4)EPPALVELVAAVR	3	VMAC(UniMod:4)EPPALVELVAAVR3	6303.52	14108.4	13489.4
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	VMADLGLNER	VMADLGLNER	2	VMADLGLNER2	6803.38	3054.44	4471.53
Q9QYW3	Q9QYW3	PHOCN_RAT	Mob4	MOB-like protein phocein	1	VMAEGTAVLR	VMAEGTAVLR	2	VMAEGTAVLR2	180962	179308	186491
Q9QXU2	Q9QXU2	SURF1_RAT	Surf1	Surfeit locus protein 1	1	VMAEPIPLPADPMELK	VMAEPIPLPADPMELK	2	VMAEPIPLPADPMELK2	13441.9	15834.3	13388.6
P85515	P85515	ACTZ_RAT	Actr1a	Alpha-centractin	1	VMAGALEGDIFIGPK	VMAGALEGDIFIGPK	2	VMAGALEGDIFIGPK2	172638	160333	159205
P85515	P85515	ACTZ_RAT	Actr1a	Alpha-centractin	1	VMAGALEGDIFIGPK	VMAGALEGDIFIGPK	3	VMAGALEGDIFIGPK3	18982.9	18522.4	16143.1
F7F067	F7F067	F7F067_RAT	Actr1b	Actin related protein 1B	1	VMAGALEGDLFIGPK	VMAGALEGDLFIGPK	2	VMAGALEGDLFIGPK2			154033
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	VMAGDEWLFEGPGTYIPQK	VMAGDEWLFEGPGTYIPQK	3	VMAGDEWLFEGPGTYIPQK3	52812.9	44957.5	61769.4
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	VMAGSLLLDK	VMAGSLLLDK	2	VMAGSLLLDK2	160621	160708	183081
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	VMAGSLLLDKR	VMAGSLLLDKR	2	VMAGSLLLDKR2	3216.96		
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	VMAGSLLLDKR	VMAGSLLLDKR	3	VMAGSLLLDKR3	54483.4	80458.7	67156.2
D3ZYR1	D3ZYR1	FCHO2_RAT	Fcho2	F-BAR domain only protein 2	1	VMAHFVENFWGEK	VMAHFVENFWGEK	3	VMAHFVENFWGEK3	11985.3	8653.64	9553.27
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	VMALWHQLHINTK	VMALWHQLHINTK	2	VMALWHQLHINTK2	1926.29		
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	VMALWHQLHINTK	VMALWHQLHINTK	3	VMALWHQLHINTK3	25533.9	24525.6	26578.2
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	VMALWHQLHINTK	VMALWHQLHINTK	4	VMALWHQLHINTK4	27116.8	30641.5	22955.9
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	VMASMFYEVSTR	VMASMFYEVSTR	2	VMASMFYEVSTR2	8152.2	8340.18	12112.9
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	VMATSGCAAIR	VMATSGC(UniMod:4)AAIR	2	VMATSGC(UniMod:4)AAIR2	12699.9	12711.4	13051.3
D3ZD73	D3ZD73	D3ZD73_RAT	Ddx6	DEAD-box helicase 6	1	VMATTGGTNLR	VMATTGGTNLR	2	VMATTGGTNLR2	13243.4	18713.7	10637.8
D3ZD73	D3ZD73	D3ZD73_RAT	Ddx6	DEAD-box helicase 6	1	VMATTGGTNLRDDIMR	VMATTGGTNLRDDIMR	3	VMATTGGTNLRDDIMR3	16785.8	13739	5783.3
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	VMCCVAQQASEK	VMC(UniMod:4)C(UniMod:4)VAQQASEK	2	VMC(UniMod:4)C(UniMod:4)VAQQASEK2	29974.8	24768.1	21869.7
Q9JMK8	Q9JMK8	VPS54_RAT	Vps54	Vacuolar protein sorting-associated protein 54	1	VMCEGSLQILR	VMC(UniMod:4)EGSLQILR	2	VMC(UniMod:4)EGSLQILR2	3955.81	5229.76	4713.62
A0A096MKB0	A0A096MKB0	A0A096MKB0_RAT	Rab24	Max dimerization protein 3	1	VMCVGDR	VMC(UniMod:4)VGDR	2	VMC(UniMod:4)VGDR2	18679.5	7699.8	7432.49
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	VMDAVLSDGNLETR	VMDAVLSDGNLETR	2	VMDAVLSDGNLETR2	28007.9	41669.8	30019.5
A0A8I6AF96	A0A8I6AF96	A0A8I6AF96_RAT	Heatr5a	HEAT repeat containing 5A	1	VMDAVLSDGNLETR	VMDAVLSDGNLETR	3	VMDAVLSDGNLETR3		3410.92	
P50475	P50475	SYAC_RAT	Aars1	Alanine--tRNA ligase, cytoplasmic	1	VMDDLDR	VMDDLDR	2	VMDDLDR2	18997.3	18262.1	22234.2
D3ZLM5	D3ZLM5	D3ZLM5_RAT	Nhlrc2	NHL repeat containing 2	1	VMDLEAR	VMDLEAR	2	VMDLEAR2	24411.2	25376.1	17824.4
A0A0G2K8N6	A0A0G2K8N6	A0A0G2K8N6_RAT	Ankmy2	Ankyrin repeat and MYND domain containing 2	1	VMDLICEK	VMDLIC(UniMod:4)EK	2	VMDLIC(UniMod:4)EK2	31180.8	25464.7	21755.7
Q5U2Z4	Q5U2Z4	Q5U2Z4_RAT	Nfkb2	Nuclear factor kappa B subunit 2	1	VMDLSIVR	VMDLSIVR	2	VMDLSIVR2	10998.6	9640.53	10426
B0BNJ4	B0BNJ4	B0BNJ4_RAT	Ethe1	ETHE1, persulfide dioxygenase	1	VMDNLNLPKPHQIDIAVPANMR	VMDNLNLPKPHQIDIAVPANMR	4	VMDNLNLPKPHQIDIAVPANMR4	23139.9	31379.1	22121.2
Q02353	Q02353	NDST1_RAT	Ndst1	Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1	1	VMDTVQK	VMDTVQK	2	VMDTVQK2	17318.3	22534.1	20065.8
Q6IFV1	Q6IFV1	K1C14_RAT	Krt14	Keratin, type I cytoskeletal 14	1	VMDVHDGK	VMDVHDGK	2	VMDVHDGK2	4580.44		8963.79
F1LP90	A0A8I5ZLV4;F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	0	VMDVTEDEEEEIK	VMDVTEDEEEEIK	2	VMDVTEDEEEEIK2	42719.9	25774.5	37730
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	VMDVTGDEEEEIK	VMDVTGDEEEEIK	2	VMDVTGDEEEEIK2	243180	239476	212757
Q00972	Q00972	BCKD_RAT	Bckdk	[3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial	1	VMDYHFTTAEASTQDPR	VMDYHFTTAEASTQDPR	3	VMDYHFTTAEASTQDPR3		1490.66	7104.06
P11960	P11960	ODBA_RAT	Bckdha	2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment)	1	VMEAFEQAER	VMEAFEQAER	2	VMEAFEQAER2	15700.6	13318.4	14972.2
B5DF55	B5DF55	B5DF55_RAT	Stam	Signal transducing adaptor molecule	1	VMEALSLYTK	VMEALSLYTK	2	VMEALSLYTK2	20041.1	17845.3	21151.4
D4A0G0	D4A0G0	D4A0G0_RAT	Osbpl7	Oxysterol-binding protein	1	VMEENNIVHQAR	VMEENNIVHQAR	3	VMEENNIVHQAR3		7267.92	4531.29
Q3B7T9	Q3B7T9	RFIP1_RAT	Rab11fip1	Rab11 family-interacting protein 1	1	VMEETPNILR	VMEETPNILR	2	VMEETPNILR2	27038	22162	23868.9
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	VMEGLHR	VMEGLHR	2	VMEGLHR2	128573	110938	107354
D3ZDR2	D3ZDR2	D3ZDR2_RAT	Chmp6	Charged multivesicular body protein 6	1	VMEGLQVGNECLNK	VMEGLQVGNEC(UniMod:4)LNK	2	VMEGLQVGNEC(UniMod:4)LNK2	17377.5	8258.97	13471.5
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	VMEGTVAAQDEFYR	VMEGTVAAQDEFYR	2	VMEGTVAAQDEFYR2	31816.5	20864	27148.3
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	VMEGTVAAQDEFYR	VMEGTVAAQDEFYR	3	VMEGTVAAQDEFYR3		3102.39	5015.29
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	VMEHFIK	VMEHFIK	1	VMEHFIK1	16126.1	14793.8	9926.27
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	VMEHFIK	VMEHFIK	2	VMEHFIK2	572148	477580	468739
A0A8I6AA52	A0A8I6AA52	A0A8I6AA52_RAT	Wdr48	WD repeat-containing protein 48	1	VMEHVYEK	VMEHVYEK	2	VMEHVYEK2	5277.59	2494.36	
D4ADQ1	D4ADQ1	D4ADQ1_RAT	Rrm2b	Ribonucleotide reductase regulatory TP53 inducible subunit M2B	1	VMEIIVDAVK	VMEIIVDAVK	2	VMEIIVDAVK2	23491.1	11474.2	10629.5
Q5RJY4	Q5RJY4	DRS7B_RAT	Dhrs7b	Dehydrogenase/reductase SDR family member 7B	1	VMEINYFGPVALTK	VMEINYFGPVALTK	2	VMEINYFGPVALTK2	19962.6	18669	15627.4
Q5RJY4	Q5RJY4	DRS7B_RAT	Dhrs7b	Dehydrogenase/reductase SDR family member 7B	1	VMEINYFGPVALTK	VMEINYFGPVALTK	3	VMEINYFGPVALTK3	3282.17		
D3ZYS7	D3ZYS7;F1M2M6;F7F5P9	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	0	VMEKPSPLLVGR	VMEKPSPLLVGR	2	VMEKPSPLLVGR2	2940.91	7466.85	3784.65
D3ZYS7	D3ZYS7;F1M2M6;F7F5P9	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	0	VMEKPSPLLVGR	VMEKPSPLLVGR	3	VMEKPSPLLVGR3	44546.5	31881.1	26385.9
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	VMELCSSTMTCMK	VMELC(UniMod:4)SSTMTC(UniMod:4)MK	2	VMELC(UniMod:4)SSTMTC(UniMod:4)MK2	5474.25	3084.79	1974.37
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	VMELESK	VMELESK	2	VMELESK2	87120.5	67816.1	73443.4
D3ZQI6	D3ZQI6	D3ZQI6_RAT	Xpo4	Exportin 4	1	VMELFFTVHR	VMELFFTVHR	3	VMELFFTVHR3	6782.61	5637.66	5844.5
A0A8I5ZJ94	A0A8I5ZJ94;O70511	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	0	VMELLLK	VMELLLK	2	VMELLLK2	19841.4	15648.7	19870.5
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	VMELLPEK	VMELLPEK	2	VMELLPEK2	103635	113182	111909
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	VMELLVHLNK	VMELLVHLNK	3	VMELLVHLNK3	20253.5	19437.3	
P55797	P55797	APOC4_RAT	Apoc4	Apolipoprotein C-IV	1	VMEMVEPLVTR	VMEMVEPLVTR	2	VMEMVEPLVTR2	8.62009e+06	1.14943e+07	1.22467e+07
P55797	P55797	APOC4_RAT	Apoc4	Apolipoprotein C-IV	1	VMEMVEPLVTR	VMEMVEPLVTR	3	VMEMVEPLVTR3	266518	332945	335312
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	VMEPILQILQQK	VMEPILQILQQK	2	VMEPILQILQQK2	14702.6	20213.6	22179.5
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	VMEPILQILQQK	VMEPILQILQQK	3	VMEPILQILQQK3	8302.94	5328.18	10464.2
M0R8P6	M0R8P6	M0R8P6_RAT	Wwc3	Uncharacterized protein	1	VMESTTQETMNTSSGK	VMESTTQETMNTSSGK	2	VMESTTQETMNTSSGK2	1934.9		3208.44
A0A8I5ZQQ3	A0A8I5ZQQ3	A0A8I5ZQQ3_RAT	Pdpr	Pyruvate dehydrogenase phosphatase regulatory subunit	1	VMEVMPLIYDLK	VMEVMPLIYDLK	2	VMEVMPLIYDLK2	5400.72	4223.05	5465.29
Q6P6Q9	Q6P6Q9	MICU1_RAT	Micu1	Calcium uptake protein 1, mitochondrial	1	VMEYENR	VMEYENR	2	VMEYENR2	74537.3	88851.7	101372
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	VMEYINR	VMEYINR	2	VMEYINR2	281487	279625	307749
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	VMFDALEQK	VMFDALEQK	2	VMFDALEQK2	57288.5	56829.3	49908.7
Q4QQV2	Q4QQV2	DOK1_RAT	Dok1	Docking protein 1	1	VMFSFEAGR	VMFSFEAGR	2	VMFSFEAGR2	54028.4	49127.5	54368.3
Q792H5	Q792H5	CELF2_RAT	Celf2	CUGBP Elav-like family member 2	1	VMFSPFGQIEECR	VMFSPFGQIEEC(UniMod:4)R	2	VMFSPFGQIEEC(UniMod:4)R2	20166.7	17605.4	25697.4
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	VMGFGLYLMDGSVSNIYK	VMGFGLYLMDGSVSNIYK	3	VMGFGLYLMDGSVSNIYK3	2512.55	2037.79	1948.37
Q99P99	Q99P99	HDAC4_RAT	Hdac4	Histone deacetylase 4	1	VMGIHSEYWR	VMGIHSEYWR	3	VMGIHSEYWR3	11453.6	15712.2	17741.5
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	VMGLSNYHCK	VMGLSNYHC(UniMod:4)K	3	VMGLSNYHC(UniMod:4)K3	5202.5	11087.1	10407.5
Q5M824	Q5M824	SHC1_RAT	Shc1	SHC-transforming protein 1	1	VMGPGVSYLVR	VMGPGVSYLVR	2	VMGPGVSYLVR2	17804.2	14914.5	5485.4
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	VMGTFSTVTSTVK	VMGTFSTVTSTVK	2	VMGTFSTVTSTVK2	45508.1	36455.2	55248
Q32Q54	Q32Q54	Q32Q54_RAT	Uqcc1	Ubiquinol-cytochrome c reductase complex assembly factor 1	1	VMGVNSYILK	VMGVNSYILK	2	VMGVNSYILK2	8358.28	6584.23	
Q9JLD2	Q9JLD2	NEUS_RAT	Serpini1	Neuroserpin	1	VMHPETMNTSGHDFEEL	VMHPETMNTSGHDFEEL	3	VMHPETMNTSGHDFEEL3	3709.03		
Q9R0C5	Q9R0C5	GALT7_RAT	Galnt7	N-acetylgalactosaminyltransferase 7	1	VMITHCNLNEFK	VMITHC(UniMod:4)NLNEFK	3	VMITHC(UniMod:4)NLNEFK3	15055.8	25188.6	13586
F1LUU1	F1LUU1	F1LUU1_RAT	Itga11	Integrin subunit alpha 11	1	VMIVITDGESHDSPDLEK	VMIVITDGESHDSPDLEK	3	VMIVITDGESHDSPDLEK3	7689.15	12879.3	12769.4
Q498S0	Q498S0	Q498S0_RAT	Chst12	Carbohydrate sulfotransferase	1	VMIVLSESLLDR	VMIVLSESLLDR	2	VMIVLSESLLDR2	15527.4	15817.7	16233.8
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	VMIWELK	VMIWELK	2	VMIWELK2	34014.8	55229.2	49123.5
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	VMIYQDEVK	VMIYQDEVK	2	VMIYQDEVK2	495693	443560	434797
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	VMIYQDEVKLPAK	VMIYQDEVKLPAK	2	VMIYQDEVKLPAK2	7685.7	4407.4	14804.8
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	VMIYQDEVKLPAK	VMIYQDEVKLPAK	3	VMIYQDEVKLPAK3	173459	192992	193398
P05696	P05696	KPCA_RAT	Prkca	Protein kinase C alpha type	1	VMLADRK	VMLADRK	2	VMLADRK2	80139.5	88844.1	88966.1
G3V6W5	G3V6W5	G3V6W5_RAT	Ifih1	RNA helicase	1	VMLAEQLFR	VMLAEQLFR	2	VMLAEQLFR2	12998.2	15382.6	13875.5
Q5HZV9	Q5HZV9	PP1R7_RAT	Ppp1r7	Protein phosphatase 1 regulatory subunit 7	1	VMLALPSVR	VMLALPSVR	2	VMLALPSVR2	259250	296487	274759
Q6AY80	Q6AY80	NQO2_RAT	Nqo2	Ribosyldihydronicotinamide dehydrogenase [quinone]	1	VMLASWVQR	VMLASWVQR	2	VMLASWVQR2	4554.6	3126.7	5534.37
Q9JHZ4	Q9JHZ4	GRAP1_RAT	Gripap1	GRIP1-associated protein 1	1	VMLDELAMETLQEK	VMLDELAMETLQEK	2	VMLDELAMETLQEK2	12705.4	4751.82	11257
P36953	P36953	AFAM_RAT	Afm	Afamin	1	VMLDYKDR	VMLDYKDR	2	VMLDYKDR2	10160.1	14033.3	12765
Q496Z1	A0A8I5ZKI9;Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	0	VMLDYYR	VMLDYYR	2	VMLDYYR2	32928.7	43231.4	25515.5
B0BN65	B0BN65;A0A0G2JXI6	B0BN65_RAT	Cyria	CYFIP related Rac1 interactor A	0	VMLETPEYR	VMLETPEYR	2	VMLETPEYR2	129097	109169	150422
P19804	Q05982;P19804;A0A8I6AII3	NDKB_RAT	Nme2	Nucleoside diphosphate kinase B	0	VMLGETNPADSK	VMLGETNPADSK	2	VMLGETNPADSK2	9776.66		5484.1
P19804	Q05982;P19804;A0A8I6AII3	NDKB_RAT	Nme2	Nucleoside diphosphate kinase B	0	VMLGETNPADSKPGTIR	VMLGETNPADSKPGTIR	2	VMLGETNPADSKPGTIR2	8324.07	8949.26	3809.03
P19804	Q05982;P19804;A0A8I6AII3	NDKB_RAT	Nme2	Nucleoside diphosphate kinase B	0	VMLGETNPADSKPGTIR	VMLGETNPADSKPGTIR	3	VMLGETNPADSKPGTIR3	396638	413039	374684
B0K019	B0K019	BAG1_RAT	Bag1	BAG family molecular chaperone regulator 1	1	VMLIGEK	VMLIGEK	2	VMLIGEK2	56606.9	47635.8	53281.6
D4A0G7	D4A0G7	D4A0G7_RAT	Rab37	RAB37, member RAS oncogene family	1	VMLLGDSGVGK	VMLLGDSGVGK	2	VMLLGDSGVGK2	77856.4	50420.6	66131.6
A0A8I6AC50	A0A8I6AC50	A0A8I6AC50_RAT	Ttc13	Tetratricopeptide repeat domain 13	1	VMLNDPLPGQK	VMLNDPLPGQK	2	VMLNDPLPGQK2	3663.92	4599.05	
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	VMLQHELR	VMLQHELR	2	VMLQHELR2	37871.1		
Q62921	Q62921	HOIL1_RAT	Rbck1	RanBP-type and C3HC4-type zinc finger-containing protein 1	1	VMLQQGEAMYCPQCR	VMLQQGEAMYC(UniMod:4)PQC(UniMod:4)R	2	VMLQQGEAMYC(UniMod:4)PQC(UniMod:4)R2	1544.24	5034.15	4178.63
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	VMLTTAGGTK	VMLTTAGGTK	2	VMLTTAGGTK2	105964	85738	92923
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	VMLVNSMNTVK	VMLVNSMNTVK	2	VMLVNSMNTVK2	1.23592e+06	1.10877e+06	1.11118e+06
P04646	D4A771;F1M0T2;A0A8L2QNQ0;P04646;A0A096P6M4;D3ZZN4;A0A8I6A5U8	RL35A_RAT	Rpl35a	Large ribosomal subunit protein eL33	0	VMLYPSR	VMLYPSR	2	VMLYPSR2	116000	112727	113762
P04646	D4A771;F1M0T2;P04646;A0A096P6M4;D3ZZN4;A0A8I6A5U8	RL35A_RAT	Rpl35a	Large ribosomal subunit protein eL33	0	VMLYPSRI	VMLYPSRI	2	VMLYPSRI2	22936.6	28120.9	43140.9
Q9EPH8	Q9EPH8	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	1	VMMEGGR	VMMEGGR	2	VMMEGGR2	100585	93103.8	83787.6
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	VMMNLSHEK	VMMNLSHEK	2	VMMNLSHEK2	19466.4	6914.93	11172.3
F7EXY7	F7EXY7	F7EXY7_RAT	Slc25a24	Solute carrier family 25 member 24	1	VMMQVHGSK	VMMQVHGSK	2	VMMQVHGSK2	68973.3	77364.4	137927
P01026	P01026	CO3_RAT	C3	Complement C3	1	VMNIFLK	VMNIFLK	1	VMNIFLK1	20749	17924.2	14228.5
P01026	P01026	CO3_RAT	C3	Complement C3	1	VMNIFLK	VMNIFLK	2	VMNIFLK2	2.994e+06	2.84781e+06	2.79893e+06
P01026	P01026	CO3_RAT	C3	Complement C3	1	VMNIFLKDSITTWEILAVSLSDKK	VMNIFLKDSITTWEILAVSLSDKK	4	VMNIFLKDSITTWEILAVSLSDKK4		6563.83	3682.97
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	VMNLIIFHSQMLDSVEK	VMNLIIFHSQMLDSVEK	3	VMNLIIFHSQMLDSVEK3	16766.3	19265.8	14098.5
P50503	P50503	F10A1_RAT	St13	Hsc70-interacting protein	1	VMNLISK	VMNLISK	1	VMNLISK1	7061.75	2982.88	2549.94
P50503	P50503	F10A1_RAT	St13	Hsc70-interacting protein	1	VMNLISK	VMNLISK	2	VMNLISK2	341238	167648	416382
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	VMNNLGTWIDWQYLQNAAK	VMNNLGTWIDWQYLQNAAK	3	VMNNLGTWIDWQYLQNAAK3		8662.26	9019.73
Q4V7E6	Q4V7E6	Q4V7E6_RAT	Wwtr1	WW domain containing transcription regulator 1	1	VMNQPLNHVNLHPTITSTSVPQR	VMNQPLNHVNLHPTITSTSVPQR	4	VMNQPLNHVNLHPTITSTSVPQR4	4948.39	9237.47	12659.2
Q62991	Q62991	SCFD1_RAT	Scfd1	Sec1 family domain-containing protein 1	1	VMNTGSQFVMEGVK	VMNTGSQFVMEGVK	2	VMNTGSQFVMEGVK2	12747.7	8410.13	11663.1
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	VMPAQLK	VMPAQLK	2	VMPAQLK2	345910	385704	303723
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	VMPDSWR	VMPDSWR	2	VMPDSWR2	271192	297705	291492
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	VMPFSTACGTPLSNFESNQNYK	VMPFSTAC(UniMod:4)GTPLSNFESNQNYK	3	VMPFSTAC(UniMod:4)GTPLSNFESNQNYK3	11444.2		12858.1
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	VMPICLPSK	VMPIC(UniMod:4)LPSK	2	VMPIC(UniMod:4)LPSK2	1.35973e+06	997384	1.04407e+06
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	VMPICLPSKDYVAPGR	VMPIC(UniMod:4)LPSKDYVAPGR	3	VMPIC(UniMod:4)LPSKDYVAPGR3	11549.4	12546.4	17390.5
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	VMPNAIVQSVGVSGGK	VMPNAIVQSVGVSGGK	2	VMPNAIVQSVGVSGGK2	52229.2	46702.3	53534.1
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	VMPNAIVQSVGVSGGK	VMPNAIVQSVGVSGGK	3	VMPNAIVQSVGVSGGK3	11812.4	18192.1	25299.9
P30839	P30839	AL3A2_RAT	Aldh3a2	Aldehyde dehydrogenase family 3 member A2	1	VMQEEIFGPILPIVSVK	VMQEEIFGPILPIVSVK	2	VMQEEIFGPILPIVSVK2	17065.7	13370.9	22602
P30839	P30839	AL3A2_RAT	Aldh3a2	Aldehyde dehydrogenase family 3 member A2	1	VMQEEIFGPILPIVSVK	VMQEEIFGPILPIVSVK	3	VMQEEIFGPILPIVSVK3	8495.48	8755.86	15952
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	VMQIIVK	VMQIIVK	2	VMQIIVK2	178787	127862	160724
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	VMQLFGLVNTLLANDPTSLR	VMQLFGLVNTLLANDPTSLR	3	VMQLFGLVNTLLANDPTSLR3	9420.67		
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	VMQNQQDLWMEYANMER	VMQNQQDLWMEYANMER	3	VMQNQQDLWMEYANMER3	1975.63	3005.55	
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	VMQPQILEVNFNPDCER	VMQPQILEVNFNPDC(UniMod:4)ER	3	VMQPQILEVNFNPDC(UniMod:4)ER3	8225.25		4184.68
A0A096MK61	A0A096MK61	A0A096MK61_RAT	Crtap	Cartilage associated protein-like 1	1	VMQQNLVYYQYHR	VMQQNLVYYQYHR	3	VMQQNLVYYQYHR3	4223.5	3225.29	13227.3
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	VMQVLNADAIVVK	VMQVLNADAIVVK	2	VMQVLNADAIVVK2	88505.4	92507	90295
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	VMQVLNADAIVVK	VMQVLNADAIVVK	3	VMQVLNADAIVVK3	10864.1	8882.93	12473.7
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	VMQYFSNFIR	VMQYFSNFIR	2	VMQYFSNFIR2	9313.34	13105.6	8428.23
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	VMQYVNGATTTHQLPVAEAMLTCR	VMQYVNGATTTHQLPVAEAMLTC(UniMod:4)R	3	VMQYVNGATTTHQLPVAEAMLTC(UniMod:4)R3	8047.14	5476.52	
Q5M9G8	Q5M9G8	DCA11_RAT	Dcaf11	DDB1- and CUL4-associated factor 11	1	VMSHFLPNDLSFTDTYSQK	VMSHFLPNDLSFTDTYSQK	3	VMSHFLPNDLSFTDTYSQK3	23560.8	13209	17933.9
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VMSQEIQEQLHK	VMSQEIQEQLHK	2	VMSQEIQEQLHK2	31616.9	22391.6	23546.6
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VMSQEIQEQLHK	VMSQEIQEQLHK	3	VMSQEIQEQLHK3	187088	222000	200792
D3ZYS7	D3ZYS7	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	1	VMSQNFTNCHTK	VMSQNFTNC(UniMod:4)HTK	2	VMSQNFTNC(UniMod:4)HTK2	3535.07	5746.82	6059
D3ZYS7	D3ZYS7	D3ZYS7_RAT	G3bp1	G3BP stress granule assembly factor 1	1	VMSQNFTNCHTK	VMSQNFTNC(UniMod:4)HTK	3	VMSQNFTNC(UniMod:4)HTK3	120449	103715	94406.3
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	VMSSSNPDLAGTHCAADEEVK	VMSSSNPDLAGTHC(UniMod:4)AADEEVK	3	VMSSSNPDLAGTHC(UniMod:4)AADEEVK3	64016.7	56789.3	51586.7
F1LM81	F1LM81	TM1L1_RAT	Tom1l1	TOM1-like protein 1	1	VMTAILMENTPGSENHEDIELLR	VMTAILMENTPGSENHEDIELLR	3	VMTAILMENTPGSENHEDIELLR3	2894.39		8287.92
Q9EPH8	B5DF80;Q9EPH8	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	0	VMTDESGK	VMTDESGK	2	VMTDESGK2	94580.1		30832.9
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	VMTEEGLR	VMTEEGLR	2	VMTEEGLR2	284384	332081	345117
A0A8I6AH91	A0A8I6AH91	A0A8I6AH91_RAT	Pcbp1	Poly(rC) binding protein 1	1	VMTIPYQPMPASSPVICAGGQDR	VMTIPYQPMPASSPVIC(UniMod:4)AGGQDR	3	VMTIPYQPMPASSPVIC(UniMod:4)AGGQDR3	70080.8	69792.1	89970
D3ZKQ3	D3ZKQ3	D3ZKQ3_RAT	Glmn	Glomulin, FKBP associated protein	1	VMTLCPIETLR	VMTLC(UniMod:4)PIETLR	2	VMTLC(UniMod:4)PIETLR2	6475.12	8050.72	3938.48
D3ZGL1	D3ZGL1	D3ZGL1_RAT	Arhgap25	Rho GTPase activating protein 25	1	VMTMMIR	VMTMMIR	2	VMTMMIR2	32921	27675.5	30466.7
A0A8I6AIH6	A0A8I6AIH6	A0A8I6AIH6_RAT	Suclg2	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial	1	VMVAEALDISR	VMVAEALDISR	2	VMVAEALDISR2	42750.6	46832.5	32688.8
D3ZLT1	D3ZLT1	D3ZLT1_RAT	Ndufb7	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7	1	VMVATQQEMMDAQLTLQQR	VMVATQQEMMDAQLTLQQR	3	VMVATQQEMMDAQLTLQQR3	11697.6	12907.7	12739.6
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	VMVDANEVPIQK	VMVDANEVPIQK	2	VMVDANEVPIQK2	238046	199074	204509
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	VMVDLGDR	VMVDLGDR	2	VMVDLGDR2	19817.3	20723	22819.4
D3ZAZ0	D3ZAZ0	D3ZAZ0_RAT	Eif3m	Eukaryotic translation initiation factor 3 subunit M	1	VMVELLGSYTEDNASQAR	VMVELLGSYTEDNASQAR	3	VMVELLGSYTEDNASQAR3	29402.2	16097.6	26818.7
A0A0G2JXI6	A0A0G2JXI6	A0A0G2JXI6_RAT	Cyrib	CYFIP related Rac1 interactor B	1	VMVGVIILYDHVHPVGAFAK	VMVGVIILYDHVHPVGAFAK	4	VMVGVIILYDHVHPVGAFAK4	3340.89	6457.33	2507.18
P18614	P18614	ITA1_RAT	Itga1	Integrin alpha-1	1	VMVIVTDGESHDNYR	VMVIVTDGESHDNYR	3	VMVIVTDGESHDNYR3	6005.6	3896.86	8406.15
O89049	O89049	TRXR1_RAT	Txnrd1	Thioredoxin reductase 1, cytoplasmic	1	VMVLDFVTPTPLGTR	VMVLDFVTPTPLGTR	2	VMVLDFVTPTPLGTR2	9978.25	1871.85	8674.91
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	VMVNQDR	VMVNQDR	2	VMVNQDR2		36469.4	
A0A8I6AHB2;D4A8M5	A0A8I6AHB2;D4A8M5	A0A8I6AHB2_RAT;D4A8M5_RAT	ENSRNOG00000063412;Snrpepl2	Small nuclear ribonucleoprotein E	0	VMVQPINLIFR	VMVQPINLIFR	2	VMVQPINLIFR2	7731.03	9024.53	7551.16
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	VMVSISLK	VMVSISLK	2	VMVSISLK2	261989	220946	216309
G3V852	G3V852;A0A8I5Y6H9	G3V852_RAT	Tln1	Talin 1	0	VMVTNVTSLLK	VMVTNVTSLLK	2	VMVTNVTSLLK2	4.56655e+06	4.56962e+06	6685.96
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	VMVVLSEK	VMVVLSEK	2	VMVVLSEK2	22528.8	18626.5	33637.6
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	VMVVVTDGESHDGSK	VMVVVTDGESHDGSK	2	VMVVVTDGESHDGSK2	10075.3	7490.94	7016.9
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	VMVVVTDGESHDGSK	VMVVVTDGESHDGSK	3	VMVVVTDGESHDGSK3	300152	267196	247248
A0A8I6G6W8	A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	1	VMWGSDPYHAEPQR	VMWGSDPYHAEPQR	2	VMWGSDPYHAEPQR2	3367.48	2556.41	
A0A8I6G6W8	A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	1	VMWGSDPYHAEPQR	VMWGSDPYHAEPQR	3	VMWGSDPYHAEPQR3	26175.3	33235.1	22946.6
Q9JHL4	Q9JHL4	DBNL_RAT	Dbnl	Drebrin-like protein	1	VMYAFCR	VMYAFC(UniMod:4)R	2	VMYAFC(UniMod:4)R2	397733	421192	410586
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	VMYMDEDHLFSVEQITAMLLTK	VMYMDEDHLFSVEQITAMLLTK	3	VMYMDEDHLFSVEQITAMLLTK3		4655.74	4893.05
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	VMYPGVNQAGEEMER	VMYPGVNQAGEEMER	2	VMYPGVNQAGEEMER2	103442	60519.3	102539
F7FEM5	F7FEM5	F7FEM5_RAT	Sbsn	Suprabasin	1	VMYPGVNQAGEEMER	VMYPGVNQAGEEMER	3	VMYPGVNQAGEEMER3	11091.4	8147	7632.18
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	VNAADIENR	VNAADIENR	2	VNAADIENR2	96251.2	93828.2	83867.5
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	VNADALR	VNADALR	1	VNADALR1	302728	299790	270526
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	VNAELQAR	VNAELQAR	2	VNAELQAR2	116531	194043	217428
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	VNAFSNFFSGPIVVHCSAGVGR	VNAFSNFFSGPIVVHC(UniMod:4)SAGVGR	3	VNAFSNFFSGPIVVHC(UniMod:4)SAGVGR3	37632.4	36306.9	34965.5
Q02253	Q02253	MMSA_RAT	Aldh6a1	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial	1	VNAGDQPGADLGPLITPQAK	VNAGDQPGADLGPLITPQAK	3	VNAGDQPGADLGPLITPQAK3	5915.46		7411.31
A0A8I6AE91	A0A8I6AE91	A0A8I6AE91_RAT	Gga2	Golgi associated, gamma adaptin ear containing, ARF binding protein 2	1	VNAGNAVPAAVGAIPASR	VNAGNAVPAAVGAIPASR	2	VNAGNAVPAAVGAIPASR2	17857.6	22838.6	17407.5
A0A8I6AE91	A0A8I6AE91	A0A8I6AE91_RAT	Gga2	Golgi associated, gamma adaptin ear containing, ARF binding protein 2	1	VNAGNAVPAAVGAIPASR	VNAGNAVPAAVGAIPASR	3	VNAGNAVPAAVGAIPASR3	8580.96	8769.23	8747.48
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	VNAGTLAVLQR	VNAGTLAVLQR	2	VNAGTLAVLQR2	24052.5	27902.6	19069.7
A0A8I6GLY6	A0A8I6GLY6	A0A8I6GLY6_RAT	Gga1	Golgi associated, gamma adaptin ear containing, ARF binding protein 1	1	VNAIEEVNNNVK	VNAIEEVNNNVK	2	VNAIEEVNNNVK2	9161.64	3886.19	6247.56
Q6P503	Q6P503	Q6P503_RAT	Atp6v1d	V-type proton ATPase subunit D	1	VNAIEHVIIPR	VNAIEHVIIPR	2	VNAIEHVIIPR2	1369.48		2028.44
Q6P503	Q6P503	Q6P503_RAT	Atp6v1d	V-type proton ATPase subunit D	1	VNAIEHVIIPR	VNAIEHVIIPR	3	VNAIEHVIIPR3	6400.53	3771.23	13488.3
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	VNAILEK	VNAILEK	2	VNAILEK2	296873	265375	281389
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	VNALDLAVLDQVEAR	VNALDLAVLDQVEAR	2	VNALDLAVLDQVEAR2	228907	192820	192455
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	VNALDLAVLDQVEAR	VNALDLAVLDQVEAR	3	VNALDLAVLDQVEAR3	43742.9	35982.9	38745.9
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	VNALPEILK	VNALPEILK	2	VNALPEILK2		9710.06	3279.19
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	VNAPILTNTTLNVIR	VNAPILTNTTLNVIR	2	VNAPILTNTTLNVIR2	3909.49	5310.19	13419.7
F7EUU4	F7EUU4	F7EUU4_RAT	Cops5	COP9 signalosome subunit 5	1	VNAQAAAYEYMAAYIENAK	VNAQAAAYEYMAAYIENAK	3	VNAQAAAYEYMAAYIENAK3	7162.88	11501.8	14430.8
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	VNASNDGEGAYEAELAVHLPPGAHYIR	VNASNDGEGAYEAELAVHLPPGAHYIR	4	VNASNDGEGAYEAELAVHLPPGAHYIR4		8901.54	6407.16
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	VNAVFEWHITK	VNAVFEWHITK	2	VNAVFEWHITK2	7972.69	8929.95	5392.9
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	VNAVFEWHITK	VNAVFEWHITK	3	VNAVFEWHITK3	43952.1	46638.2	59505.8
Q920P0	Q920P0	DCXR_RAT	Dcxr	L-xylulose reductase	1	VNAVNPTVVMTPMGR	VNAVNPTVVMTPMGR	2	VNAVNPTVVMTPMGR2	10944	7500.11	14639.1
A0A8I6A822	A0A8I6A822	A0A8I6A822_RAT	Tm9sf3	Transmembrane 9 superfamily member	1	VNAVPRPIPEK	VNAVPRPIPEK	2	VNAVPRPIPEK2	6216.25	6029.92	9052.32
A0A8I6A822	A0A8I6A822	A0A8I6A822_RAT	Tm9sf3	Transmembrane 9 superfamily member	1	VNAVPRPIPEK	VNAVPRPIPEK	3	VNAVPRPIPEK3	102368	126467	136782
A0A8I6A822	A0A8I6A822	A0A8I6A822_RAT	Tm9sf3	Transmembrane 9 superfamily member	1	VNAVPRPIPEKK	VNAVPRPIPEKK	3	VNAVPRPIPEKK3	105481	127186	107315
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	VNAWQAK	VNAWQAK	1	VNAWQAK1	68264.8	75859.7	57331
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	VNAWQAK	VNAWQAK	2	VNAWQAK2	1.3057e+07	1.59604e+07	1.42994e+07
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	VNAYLIHDTADWK	VNAYLIHDTADWK	3	VNAYLIHDTADWK3	9001.4	4903.32	9214.29
D4ACC1	D4ACC1	D4ACC1_RAT	Dapp1	Dual adaptor of phosphotyrosine and 3-phosphoinositides 1	1	VNCFCLVFPFR	VNC(UniMod:4)FC(UniMod:4)LVFPFR	2	VNC(UniMod:4)FC(UniMod:4)LVFPFR2	13069.7	6583.02	5520.19
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	VNCKVTSRFAHYVITSQVVNSANK	VNC(UniMod:4)KVTSRFAHYVITSQVVNSANK	4	VNC(UniMod:4)KVTSRFAHYVITSQVVNSANK4	15492.8	22581.8	12925.2
D3ZEZ3	D3ZEZ3	D3ZEZ3_RAT	Dhrs2	Dehydrogenase/reductase 2	1	VNCLAPGIIK	VNC(UniMod:4)LAPGIIK	2	VNC(UniMod:4)LAPGIIK2	11821	6578.18	
Q8VID1	Q8VID1	DHRS4_RAT	Dhrs4	Dehydrogenase/reductase SDR family member 4	1	VNCLAPGLIK	VNC(UniMod:4)LAPGLIK	2	VNC(UniMod:4)LAPGLIK2		18142.2	16554.6
Q62921	Q62921	HOIL1_RAT	Rbck1	RanBP-type and C3HC4-type zinc finger-containing protein 1	1	VNCLLCK	VNC(UniMod:4)LLC(UniMod:4)K	2	VNC(UniMod:4)LLC(UniMod:4)K2	6909.61	11666.5	8489.41
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	VNCMDCLDR	VNC(UniMod:4)MDC(UniMod:4)LDR	2	VNC(UniMod:4)MDC(UniMod:4)LDR2	92248.7	104845	77995
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	VNCSIHNTPAAR	VNC(UniMod:4)SIHNTPAAR	3	VNC(UniMod:4)SIHNTPAAR3	18645.5	12108.6	12254.6
B0BNC9	B0BNC9	QORL2_RAT		Quinone oxidoreductase-like protein 2	1	VNDAFLHVMQR	VNDAFLHVMQR	3	VNDAFLHVMQR3	6201.89	2641.92	5086.7
Q62696	Q63622;Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	0	VNDCILR	VNDC(UniMod:4)ILR	2	VNDC(UniMod:4)ILR2	34588	22980	24062.8
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	VNDDIIVNWVNTTLK	VNDDIIVNWVNTTLK	2	VNDDIIVNWVNTTLK2	18550.9	27789.9	26646.4
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	VNDDIIVNWVNTTLK	VNDDIIVNWVNTTLK	3	VNDDIIVNWVNTTLK3	8700.42	3168.79	5586
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	VNDDLISEFPDK	VNDDLISEFPDK	2	VNDDLISEFPDK2	5925.9	3237.27	5492.38
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	VNDDVGIDWTNENDR	VNDDVGIDWTNENDR	2	VNDDVGIDWTNENDR2	232196	191907	202350
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	VNDDVGIDWTNENDR	VNDDVGIDWTNENDR	3	VNDDVGIDWTNENDR3	14367.5	12574.5	15105.4
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	VNDDVGIDWTNENDRLLVCQMCIK	VNDDVGIDWTNENDRLLVC(UniMod:4)QMC(UniMod:4)IK	3	VNDDVGIDWTNENDRLLVC(UniMod:4)QMC(UniMod:4)IK3		8124.1	8147.35
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	VNDEHPAYLASDEITTVR	VNDEHPAYLASDEITTVR	3	VNDEHPAYLASDEITTVR3	83790	54629.3	88588.8
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	VNDEHPAYLASDEITTVRK	VNDEHPAYLASDEITTVRK	3	VNDEHPAYLASDEITTVRK3	4118.01	2017.39	3076.33
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	VNDEHPAYLASDEITTVRK	VNDEHPAYLASDEITTVRK	4	VNDEHPAYLASDEITTVRK4	7781.53	8021.68	15668.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VNDESSKDK	VNDESSKDK	2	VNDESSKDK2			3734.17
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	VNDFHCECR	VNDFHC(UniMod:4)EC(UniMod:4)R	2	VNDFHC(UniMod:4)EC(UniMod:4)R2		5009.5	
Q07008	Q07008	NOTC1_RAT	Notch1	Neurogenic locus notch homolog protein 1	1	VNDFHCECR	VNDFHC(UniMod:4)EC(UniMod:4)R	3	VNDFHC(UniMod:4)EC(UniMod:4)R3		33412.4	
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	VNDFLAEIFK	VNDFLAEIFK	2	VNDFLAEIFK2	35093.2	18810.5	20985.5
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	VNDFLAEIFKK	VNDFLAEIFKK	2	VNDFLAEIFKK2	7263.93	9664.6	9062.79
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	VNDFLAEIFKK	VNDFLAEIFKK	3	VNDFLAEIFKK3	93265.6	73343.5	67245.9
Q63372	Q63372	NRX1A_RAT	Nrxn1	Neurexin-1	1	VNDGEWYHVDFQR	VNDGEWYHVDFQR	3	VNDGEWYHVDFQR3	2668.19	7392.05	3405.33
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	VNDLVATAYK	VNDLVATAYK	2	VNDLVATAYK2	27121.1	30663.3	28683.5
P34067	P34067	PSB4_RAT	Psmb4	Proteasome subunit beta type-4	1	VNDSTMLGASGDYADFQYLK	VNDSTMLGASGDYADFQYLK	3	VNDSTMLGASGDYADFQYLK3	182225	167669	197624
P62703	P62703	RS4X_RAT	Rps4x	Small ribosomal subunit protein eS4	1	VNDTIQIDLETGK	VNDTIQIDLETGK	2	VNDTIQIDLETGK2	16687.5	10528.3	7559.65
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	VNDVCTNGQDLIK	VNDVC(UniMod:4)TNGQDLIK	2	VNDVC(UniMod:4)TNGQDLIK2	161748	141884	134776
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	VNDVCTNGQDLIKK	VNDVC(UniMod:4)TNGQDLIKK	2	VNDVC(UniMod:4)TNGQDLIKK2	1682.64	3194.4	4804.98
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	VNDVCTNGQDLIKK	VNDVC(UniMod:4)TNGQDLIKK	3	VNDVC(UniMod:4)TNGQDLIKK3	136106	136442	113873
Q8R553	Q8R553	CSTN3_RAT	Clstn3	Calsyntenin-3	1	VNDVNEFAPVFVER	VNDVNEFAPVFVER	2	VNDVNEFAPVFVER2	8958.09	9869.36	14377.9
D3ZW15	D3ZW15	D3ZW15_RAT	Sec24b	SEC24 homolog B, COPII coat complex component	1	VNDVPEEFLYNPLTR	VNDVPEEFLYNPLTR	2	VNDVPEEFLYNPLTR2	26226.5		25336
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	VNDVVPWVLDVILNK	VNDVVPWVLDVILNK	2	VNDVVPWVLDVILNK2		5304.3	1090.24
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	VNEAAPEKPQEDSGTAGGISSTSASVNR	VNEAAPEKPQEDSGTAGGISSTSASVNR	3	VNEAAPEKPQEDSGTAGGISSTSASVNR3	10488.2	14088	6885.97
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	VNEADVR	VNEADVR	2	VNEADVR2	14391.7	31985	24108
B2GUX8	B2GUX8	B2GUX8_RAT	Sh3bp5l	SH3 domain-binding protein 5	1	VNEAEEER	VNEAEEER	2	VNEAEEER2			12816.5
P84079	P61206;P84079	ARF1_RAT	Arf1	ADP-ribosylation factor 1	0	VNEAREELMR	VNEAREELMR	2	VNEAREELMR2	1682.3		
P84079	P61206;P84079	ARF1_RAT	Arf1	ADP-ribosylation factor 1	0	VNEAREELMR	VNEAREELMR	3	VNEAREELMR3	110973	117432	129764
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	VNEATAVLYAR	VNEATAVLYAR	2	VNEATAVLYAR2	21261.4	20031.3	25223.9
D3ZI07	D3ZI07	D3ZI07_RAT	Kif3b	Kinesin-like protein	1	VNEDPKDALLR	VNEDPKDALLR	3	VNEDPKDALLR3	17643.1	21717	19492.6
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	VNEDTMELIR	VNEDTMELIR	2	VNEDTMELIR2	26079.7	26997.3	21763
D4A415	D4A415	D4A415_RAT	Abraxas2	Abraxas 2, BRISC complex subunit	1	VNEESLDR	VNEESLDR	2	VNEESLDR2	142438	152329	161021
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	VNEETLPAEEK	VNEETLPAEEK	2	VNEETLPAEEK2	2393.26	2054.2	
D4A416	D4A416	D4A416_RAT	Clptm1l	CLPTM1-like	1	VNEFGESYEEQPK	VNEFGESYEEQPK	2	VNEFGESYEEQPK2	2265.88	5856.02	
Q5XIL4	Q5XIL4	Q5XIL4_RAT	Sorbs3	Sorbin and SH3 domain containing 3	1	VNEHWYEGR	VNEHWYEGR	3	VNEHWYEGR3	6321.55	4983.61	7556.17
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	VNEIVETNRPDSK	VNEIVETNRPDSK	2	VNEIVETNRPDSK2	14590.5	12211	10217.3
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	VNEIVETNRPDSK	VNEIVETNRPDSK	3	VNEIVETNRPDSK3	248129	235762	239292
F1LQI6	F1LQI6	F1LQI6_RAT	Zer1	Zyg-11 related, cell cycle regulator	1	VNELLLGILSPTR	VNELLLGILSPTR	2	VNELLLGILSPTR2	2540.39	4264.33	1318.01
B1H257	B1H257	B1H257_RAT	Borcs5	BLOC-1-related complex subunit 5	1	VNEMSAILR	VNEMSAILR	2	VNEMSAILR2	14178.6	13411.3	19768.6
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	VNESSHYDLAFTDVHFK	VNESSHYDLAFTDVHFK	4	VNESSHYDLAFTDVHFK4	7104.12	3936.74	4457.47
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	VNESSHYDLAFTDVHFKPGQIR	VNESSHYDLAFTDVHFKPGQIR	4	VNESSHYDLAFTDVHFKPGQIR4	28223.9	14990.7	21231.7
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	VNESVIKPEQEFFTAPFEK	VNESVIKPEQEFFTAPFEK	3	VNESVIKPEQEFFTAPFEK3	390988	392288	418767
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	VNEVNQFAAK	VNEVNQFAAK	2	VNEVNQFAAK2	507948	550103	560269
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	VNFEAAWDEVGDEFEK	VNFEAAWDEVGDEFEK	2	VNFEAAWDEVGDEFEK2	5574.74	6290.69	6116.26
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	VNFEEDSR	VNFEEDSR	2	VNFEEDSR2	56856.3	42210.4	47374.7
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	VNFEIHPEGENINVVSPLTGK	VNFEIHPEGENINVVSPLTGK	3	VNFEIHPEGENINVVSPLTGK3	4587.13	5707.76	
Q63803	P38406;Q63803	GNAS1_RAT	Gnas	Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas	0	VNFHMFDVGGQR	VNFHMFDVGGQR	2	VNFHMFDVGGQR2	6989.75	3881.14	7676.44
Q63803	P38406;Q63803	GNAS1_RAT	Gnas	Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas	0	VNFHMFDVGGQR	VNFHMFDVGGQR	3	VNFHMFDVGGQR3	133184	118763	73604.2
Q63803	P38406;Q63803	GNAS1_RAT	Gnas	Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas	0	VNFHMFDVGGQRDER	VNFHMFDVGGQRDER	3	VNFHMFDVGGQRDER3	8186.66	8105.39	6983.06
Q63803	P38406;Q63803	GNAS1_RAT	Gnas	Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas	0	VNFHMFDVGGQRDER	VNFHMFDVGGQRDER	4	VNFHMFDVGGQRDER4	13397	16225.8	28065.9
A0A8I6ACU6	A0A8I6ACU6	A0A8I6ACU6_RAT	Glcci1	Glucocorticoid induced 1	1	VNFIPTGSAFCPVK	VNFIPTGSAFC(UniMod:4)PVK	2	VNFIPTGSAFC(UniMod:4)PVK2	40171.4	38645.9	46777.7
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	VNFLKPNLK	VNFLKPNLK	2	VNFLKPNLK2	3802.43	6475.94	
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VNFLPEIITLSK	VNFLPEIITLSK	2	VNFLPEIITLSK2	346110	437309	499493
P63036	P63036	DNJA1_RAT	Dnaja1	DnaJ homolog subfamily A member 1	1	VNFPENGFLSPDK	VNFPENGFLSPDK	2	VNFPENGFLSPDK2	29840.5	25177.9	30635.6
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	VNFTVDQIR	VNFTVDQIR	2	VNFTVDQIR2	144838	155754	136695
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VNGALVTLPVYLAGGR	VNGALVTLPVYLAGGR	2	VNGALVTLPVYLAGGR2	371282	368359	407986
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VNGALVTLPVYLAGGR	VNGALVTLPVYLAGGR	3	VNGALVTLPVYLAGGR3	47837.6	35980.1	59814.8
P30009	P30009	MARCS_RAT	Marcks	Myristoylated alanine-rich C-kinase substrate	1	VNGDASPAAAEPGAK	VNGDASPAAAEPGAK	2	VNGDASPAAAEPGAK2	15003.3	12744.7	10844.9
B2RYW9	B2RYW9	FAHD2_RAT	Fahd2	Fumarylacetoacetate hydrolase domain-containing protein 2	1	VNGEIVQSSNTNQMVFK	VNGEIVQSSNTNQMVFK	2	VNGEIVQSSNTNQMVFK2	5210.94	3319.68	2418.99
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	VNGLPIENHPFPGDVMFPR	VNGLPIENHPFPGDVMFPR	3	VNGLPIENHPFPGDVMFPR3	31469.3	32393	27485.6
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	VNGLSEDTAQSPGR	VNGLSEDTAQSPGR	2	VNGLSEDTAQSPGR2	2512.76		
P62250	P62250;A0A8I5YCD9;A0A8I5ZY61	RS16_RAT	Rps16	Small ribosomal subunit protein uS9	0	VNGRPLEMIEPR	VNGRPLEMIEPR	3	VNGRPLEMIEPR3	30423.7	16354.8	18076.3
P35815	P20650;P35815	PPM1B_RAT	Ppm1b	Protein phosphatase 1B	0	VNGSLAVSR	VNGSLAVSR	2	VNGSLAVSR2	39384.6	26327.9	41520.8
Q9Z2L0	Q9Z2L0;A0A8I5ZWU7	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	0	VNGSLETK	VNGSLETK	2	VNGSLETK2		278645	
Q80Z30	Q80Z30	PPM1E_RAT	Ppm1e	Protein phosphatase 1E	1	VNGSLSVSR	VNGSLSVSR	2	VNGSLSVSR2	14636	15640	11844.4
Q9WVR7	Q9WVR7	PPM1F_RAT	Ppm1f	Protein phosphatase 1F	1	VNGTLAVSR	VNGTLAVSR	2	VNGTLAVSR2	6416.33	7756.66	5861.42
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	VNGTLVTHSNHLEVVK	VNGTLVTHSNHLEVVK	3	VNGTLVTHSNHLEVVK3	17401.2	14354.8	13312.7
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	VNGTLVTHSNHLEVVK	VNGTLVTHSNHLEVVK	4	VNGTLVTHSNHLEVVK4	11865.5	17976.3	10406.2
Q05096	Q05096	MYO1B_RAT	Myo1b	Unconventional myosin-Ib	1	VNGVDDAANFR	VNGVDDAANFR	2	VNGVDDAANFR2	4354.24	929.188	7837.99
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VNGVDMK	VNGVDMK	1	VNGVDMK1	4188.19	5297.97	3679.99
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VNGVDMK	VNGVDMK	2	VNGVDMK2	368700	374616	425609
P48500	A0A0G2JWU1;A0A8I5ZVI4;P48500	TPIS_RAT	Tpi1	Triosephosphate isomerase	0	VNHALSEGLGVIACIGEK	VNHALSEGLGVIAC(UniMod:4)IGEK	2	VNHALSEGLGVIAC(UniMod:4)IGEK2	3422.87	4782.72	3490.8
P48500	A0A0G2JWU1;A0A8I5ZVI4;P48500	TPIS_RAT	Tpi1	Triosephosphate isomerase	0	VNHALSEGLGVIACIGEK	VNHALSEGLGVIAC(UniMod:4)IGEK	3	VNHALSEGLGVIAC(UniMod:4)IGEK3	137955	123548	118971
Q99P99	Q99P99	HDAC4_RAT	Hdac4	Histone deacetylase 4	1	VNHMPSTVDVATALPLQVAPAAVPMDLR	VNHMPSTVDVATALPLQVAPAAVPMDLR	3	VNHMPSTVDVATALPLQVAPAAVPMDLR3	3485.62	2827.6	9564.79
D3ZS97	D3ZS97	D3ZS97_RAT	Cd226	CD226 molecule	1	VNIAVYHPNHNMHIDPNYLHR	VNIAVYHPNHNMHIDPNYLHR	3	VNIAVYHPNHNMHIDPNYLHR3	19779.2	9633.18	9777.92
D3ZS97	D3ZS97	D3ZS97_RAT	Cd226	CD226 molecule	1	VNIAVYHPNHNMHIDPNYLHR	VNIAVYHPNHNMHIDPNYLHR	4	VNIAVYHPNHNMHIDPNYLHR4	109295	84075.1	83894.3
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	VNIDFEPFKPINTSLYLCDNK	VNIDFEPFKPINTSLYLC(UniMod:4)DNK	3	VNIDFEPFKPINTSLYLC(UniMod:4)DNK3	56975.3	81771.3	44852.2
Q5XI22	A0A0G2JUB4;Q5XI22	THIC_RAT	Acat2	Acetyl-CoA acetyltransferase, cytosolic	0	VNIDGGAIALGHPLGASGCR	VNIDGGAIALGHPLGASGC(UniMod:4)R	3	VNIDGGAIALGHPLGASGC(UniMod:4)R3	11026.1	12743	5904.82
Q4V7A0	Q4V7A0	SKI8_RAT	Skic8	Superkiller complex protein 8	1	VNIFGVESGK	VNIFGVESGK	2	VNIFGVESGK2	8996.83	11783.8	8411.93
Q4V7A0	Q4V7A0	SKI8_RAT	Skic8	Superkiller complex protein 8	1	VNIFGVESGKK	VNIFGVESGKK	3	VNIFGVESGKK3	1124.72		1200.82
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	VNIGMIDQSR	VNIGMIDQSR	2	VNIGMIDQSR2	31754.5	42936.3	27971.2
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	VNIGQGSHPQK	VNIGQGSHPQK	2	VNIGQGSHPQK2	3285.7	3879.16	1891.51
D3ZF97	D3ZF97	D3ZF97_RAT	Erlec1	Endoplasmic reticulum lectin	1	VNIHEYYLGNMLAK	VNIHEYYLGNMLAK	2	VNIHEYYLGNMLAK2			4373.54
D3ZF97	D3ZF97	D3ZF97_RAT	Erlec1	Endoplasmic reticulum lectin	1	VNIHEYYLGNMLAK	VNIHEYYLGNMLAK	3	VNIHEYYLGNMLAK3	15474.3	20394.2	20802.3
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	VNIIGEVVDQGSTNLK	VNIIGEVVDQGSTNLK	2	VNIIGEVVDQGSTNLK2	89601.3	104276	99962.8
D3ZUV3	D3ZUV3	D3ZUV3_RAT	Eif2a	Eukaryotic translation initiation factor 2A	1	VNIINVANK	VNIINVANK	2	VNIINVANK2	8575.92	8074.84	9034.68
B3GNI6	B0BNF1;A0A8I6AA08;B3GNI6	SEP11_RAT	Septin11	Septin-11	0	VNIIPIIAK	VNIIPIIAK	2	VNIIPIIAK2	288770	223775	265997
Q9WVC0	Q5PQK1;Q9WVC0;A0A1W2Q660;A0A8I5ZW51;A0A8I6ARI4	SEPT7_RAT	Septin7	Septin-7	0	VNIIPLIAK	VNIIPLIAK	2	VNIIPLIAK2	288770	223775	265997
Q07205	Q07205;A0A8I6AVQ3	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	VNILFDFVK	VNILFDFVK	2	VNILFDFVK2	101890	111368	100492
Q5XI81	Q5XI81	FXR1_RAT	Fxr1	RNA-binding protein FXR1	1	VNILSDMHLR	VNILSDMHLR	3	VNILSDMHLR3	14709.1	14398	19900
Q923V4	Q923V4	FBX6_RAT	Fbxo6	F-box only protein 6	1	VNINELPENILLELFTHVPAPQLLR	VNINELPENILLELFTHVPAPQLLR	4	VNINELPENILLELFTHVPAPQLLR4	4502.93		
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	VNINVPMK	VNINVPMK	2	VNINVPMK2	129797	161555	136680
P58365	P58365	CAD23_RAT	Cdh23	Cadherin-23	1	VNIQVGDVNDNAPTFHNQPYSVR	VNIQVGDVNDNAPTFHNQPYSVR	3	VNIQVGDVNDNAPTFHNQPYSVR3		1937.65	
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	VNIVDLQQVINVDLTHIENR	VNIVDLQQVINVDLTHIENR	3	VNIVDLQQVINVDLTHIENR3	18516.8	19983.4	13479.1
A0A096MJN4	A0A096MJN4	SEPT4_RAT	Septin4	Septin-4	1	VNIVPILAK	VNIVPILAK	2	VNIVPILAK2	126861	128893	139939
Q9JJM9	Q9JJM9	SEPT5_RAT	Septin5	Septin-5	1	VNIVPLIAK	VNIVPLIAK	2	VNIVPLIAK2	126861	128893	139939
Q91Y81	Q91Y81	SEPT2_RAT	Septin2	Septin-2	1	VNIVPVIAK	VNIVPVIAK	2	VNIVPVIAK2	162686	132612	121377
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VNKDDIQK	VNKDDIQK	2	VNKDDIQK2			12962.5
Q9R063	Q9R063	PRDX5_RAT	Prdx5	Peroxiredoxin-5, mitochondrial	1	VNLAELFK	VNLAELFK	1	VNLAELFK1	7402.9	4867.38	3092.7
Q9R063	Q9R063	PRDX5_RAT	Prdx5	Peroxiredoxin-5, mitochondrial	1	VNLAELFK	VNLAELFK	2	VNLAELFK2	237924	198121	260988
Q9R063	Q9R063	PRDX5_RAT	Prdx5	Peroxiredoxin-5, mitochondrial	1	VNLAELFKDK	VNLAELFKDK	3	VNLAELFKDK3	2953.78	3704.15	9937.09
Q6AXT5	Q6AXT5	RAB21_RAT	Rab21	Ras-related protein Rab-21	1	VNLAIWDTAGQER	VNLAIWDTAGQER	2	VNLAIWDTAGQER2	141502	120463	129231
Q6AXT5	Q6AXT5	RAB21_RAT	Rab21	Ras-related protein Rab-21	1	VNLAIWDTAGQER	VNLAIWDTAGQER	3	VNLAIWDTAGQER3	1800.58	4230.37	
P11980	P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	1	VNLAMNVGK	VNLAMNVGK	1	VNLAMNVGK1	1550.6		1407.05
P11980	P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	1	VNLAMNVGK	VNLAMNVGK	2	VNLAMNVGK2	282881	224076	259210
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	VNLCGHWYYSK	VNLC(UniMod:4)GHWYYSK	2	VNLC(UniMod:4)GHWYYSK2	9312.78	11406.6	13120.8
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	VNLCGHWYYSK	VNLC(UniMod:4)GHWYYSK	3	VNLC(UniMod:4)GHWYYSK3	116811	131566	123540
A0A8I6AS56	A0A8I6AS56	A0A8I6AS56_RAT	Abhd11	Abhydrolase domain containing 11	1	VNLDALAQQLDK	VNLDALAQQLDK	2	VNLDALAQQLDK2	6354.04	888.29	3770.22
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	VNLEEQLK	VNLEEQLK	2	VNLEEQLK2	14508.2	18854.6	14486.3
Q62991	Q62991	SCFD1_RAT	Scfd1	Sec1 family domain-containing protein 1	1	VNLEESTGVENSPTGARPK	VNLEESTGVENSPTGARPK	3	VNLEESTGVENSPTGARPK3	23161.8	30962.2	23973.5
A0A8I5ZM80	A0A8I5ZM80	A0A8I5ZM80_RAT	Armh3	Armadillo-like helical domain containing 3	1	VNLEYLEGK	VNLEYLEGK	2	VNLEYLEGK2	7494.35	7185.99	8303.18
P01830	P01830	THY1_RAT	Thy1	Thy-1 membrane glycoprotein	1	VNLFSDR	VNLFSDR	2	VNLFSDR2	335536	266776	333915
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	VNLFTDFDK	VNLFTDFDK	2	VNLFTDFDK2	136806	141977	135325
F7EUU4	F7EUU4	F7EUU4_RAT	Cops5	COP9 signalosome subunit 5	1	VNLGAFR	VNLGAFR	2	VNLGAFR2	208866	190618	194185
D3ZG57	D3ZG57	D3ZG57_RAT	Tor4a	Torsin family 4, member A	1	VNLLQHKPAHAGHESVGPGV	VNLLQHKPAHAGHESVGPGV	3	VNLLQHKPAHAGHESVGPGV3	6531.67		6717.98
D3ZG57	D3ZG57	D3ZG57_RAT	Tor4a	Torsin family 4, member A	1	VNLLQHKPAHAGHESVGPGV	VNLLQHKPAHAGHESVGPGV	4	VNLLQHKPAHAGHESVGPGV4	40639.3	42655.6	39658.1
Q64057	Q64057	AL7A1_RAT	Aldh7a1	Alpha-aminoadipic semialdehyde dehydrogenase	1	VNLLSFTGSTQVGK	VNLLSFTGSTQVGK	2	VNLLSFTGSTQVGK2	7234.68	4087.34	7079.01
Q6AXX6	Q6AXX6	PXL2A_RAT	Prxl2a	Peroxiredoxin-like 2A	1	VNLLSVLEAVK	VNLLSVLEAVK	2	VNLLSVLEAVK2	52122.5	64703.1	56337.6
Q6AXX6	Q6AXX6	PXL2A_RAT	Prxl2a	Peroxiredoxin-like 2A	1	VNLLSVLEAVKK	VNLLSVLEAVKK	2	VNLLSVLEAVKK2	7364.52	6155.38	7992.07
Q6AXX6	Q6AXX6	PXL2A_RAT	Prxl2a	Peroxiredoxin-like 2A	1	VNLLSVLEAVKK	VNLLSVLEAVKK	3	VNLLSVLEAVKK3	15689.7	19877.1	17889.2
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	VNLNESKPVQMMYLR	VNLNESKPVQMMYLR	2	VNLNESKPVQMMYLR2	4831.56	5785.83	
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	VNLNESKPVQMMYLR	VNLNESKPVQMMYLR	3	VNLNESKPVQMMYLR3	37203	33058.7	47784.4
Q9WUD2	Q9WUD2	TRPV2_RAT	Trpv2	Transient receptor potential cation channel subfamily V member 2	1	VNLNFIK	VNLNFIK	2	VNLNFIK2	31844.1	32728.3	35451.9
Q5M7T2	Q5M7T2	SPRY7_RAT	Spryd7	SPRY domain-containing protein 7	1	VNLNQIPLGR	VNLNQIPLGR	2	VNLNQIPLGR2	55474.6	48253.4	53219.5
Q63615	Q63615	VP33A_RAT	Vps33a	Vacuolar protein sorting-associated protein 33A	1	VNLNVLR	VNLNVLR	2	VNLNVLR2	19060.6	20394.9	9013.02
Q9JMK8	Q9JMK8	VPS54_RAT	Vps54	Vacuolar protein sorting-associated protein 54	1	VNLPAALNDPTLAK	VNLPAALNDPTLAK	2	VNLPAALNDPTLAK2	5477.14	4659.34	6748.81
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	VNLQENQDALK	VNLQENQDALK	2	VNLQENQDALK2	7205.49	5734.39	2789.95
A0A8I5ZS17	A0A8I5ZS17	A0A8I5ZS17_RAT	Snx25	Sorting nexin 25	1	VNLQEVGGVETK	VNLQEVGGVETK	2	VNLQEVGGVETK2	5184.8		6411.6
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	VNLQGDIVDR	VNLQGDIVDR	2	VNLQGDIVDR2	283617	276848	315408
Q505J8	Q505J8	SYFA_RAT	Farsa	Phenylalanine--tRNA ligase alpha subunit	1	VNLQMVYDSPVCR	VNLQMVYDSPVC(UniMod:4)R	2	VNLQMVYDSPVC(UniMod:4)R2	12851.7	16105.9	13393.2
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	VNLQNNPGAMEHFHMK	VNLQNNPGAMEHFHMK	2	VNLQNNPGAMEHFHMK2	22785.2	15113	18329.6
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	VNLQNNPGAMEHFHMK	VNLQNNPGAMEHFHMK	3	VNLQNNPGAMEHFHMK3	212843	158953	187000
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	VNLQNNPGAMEHFHMK	VNLQNNPGAMEHFHMK	4	VNLQNNPGAMEHFHMK4	841222	920468	923602
Q6NX65	Q6NX65	PDC10_RAT	Pdcd10	Programmed cell death protein 10	1	VNLSAAQTLR	VNLSAAQTLR	2	VNLSAAQTLR2	483851	452994	466751
Q6MG59	Q6MG59	G6B_RAT	Mpig6b	Megakaryocyte and platelet inhibitory receptor G6b	1	VNLSCIGVSDPTR	VNLSC(UniMod:4)IGVSDPTR	2	VNLSC(UniMod:4)IGVSDPTR2	33297.2	38491.4	37104.3
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	VNLSPVTPAK	VNLSPVTPAK	2	VNLSPVTPAK2	372610	416296	408398
F1M1E4	F1M1E4	F1M1E4_RAT	Pnkd	PNKD metallo-beta-lactamase domain containing	1	VNLVAILCTHK	VNLVAILC(UniMod:4)THK	2	VNLVAILC(UniMod:4)THK2	5122.68		
B2RZ68	B2RZ68	B2RZ68_RAT	Dcaf7	DDB1 and CUL4 associated factor 7	1	VNLVSGHVK	VNLVSGHVK	2	VNLVSGHVK2	12081.1	5704.8	6718.94
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	VNLWLVCSR	VNLWLVC(UniMod:4)SR	2	VNLWLVC(UniMod:4)SR2	6581.94	18994	8365.84
B3GNI6	B0BNF1;B3GNI6	SEP11_RAT	Septin11	Septin-11	0	VNMEDLR	VNMEDLR	2	VNMEDLR2	149446	119356	117722
A0A8I6A3Q1;A0A8I6AT35	A0A8I6A3Q1;A0A8I6AT35	A0A8I6A3Q1_RAT;A0A8I6AT35_RAT	ENSRNOG00000067007;LOC679539	UBC core domain-containing protein	0	VNMSGVSSSNGVVDPR	VNMSGVSSSNGVVDPR	2	VNMSGVSSSNGVVDPR2	9243.98	10741.8	6335.11
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	VNMTELDK	VNMTELDK	2	VNMTELDK2	18981.9	15556.5	14345.9
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	VNMTELDKEISTLR	VNMTELDKEISTLR	2	VNMTELDKEISTLR2	5887.66	5808.03	10296.3
A0A8I6GM04	A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	1	VNMTELDKEISTLR	VNMTELDKEISTLR	3	VNMTELDKEISTLR3	160291	172525	168913
Q9QWE9	Q9QWE9	GGT5_RAT	Ggt5	Glutathione hydrolase 5 proenzyme	1	VNMYHHLVEALK	VNMYHHLVEALK	3	VNMYHHLVEALK3	18196	7586.63	19952.2
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	VNNADDFPNLFR	VNNADDFPNLFR	2	VNNADDFPNLFR2	14050.2	13990.1	9581.06
Q9R1Z0	Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	1	VNNASLIGLGYTQSLR	VNNASLIGLGYTQSLR	2	VNNASLIGLGYTQSLR2	36875.3	35905.1	34149
Q9R1Z0	Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	1	VNNASLIGLGYTQSLR	VNNASLIGLGYTQSLR	3	VNNASLIGLGYTQSLR3	7924.71	4443.7	7667.53
Q9R1Z0	Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	1	VNNASLIGLGYTQSLRPGVK	VNNASLIGLGYTQSLRPGVK	3	VNNASLIGLGYTQSLRPGVK3	1.24328e+06	1.14267e+06	1.26764e+06
O35547	O35547	ACSL4_RAT	Acsl4	Long-chain-fatty-acid--CoA ligase 4	1	VNNFGSGLTALGLKPK	VNNFGSGLTALGLKPK	3	VNNFGSGLTALGLKPK3	14813.1	8589.94	13829.5
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	VNNFIEK	VNNFIEK	2	VNNFIEK2	5767.56	11672.2	10522.4
Q9JKE3	Q9JKE3	SCAM5_RAT	Scamp5	Secretory carrier-associated membrane protein 5	1	VNNFPPLPK	VNNFPPLPK	2	VNNFPPLPK2	56145.3	61999.5	59366.9
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	VNNGGCSNLCLLSPGGGHK	VNNGGC(UniMod:4)SNLC(UniMod:4)LLSPGGGHK	2	VNNGGC(UniMod:4)SNLC(UniMod:4)LLSPGGGHK2	4936.84	9840.69	13937.8
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	VNNGGCSNLCLLSPGGGHK	VNNGGC(UniMod:4)SNLC(UniMod:4)LLSPGGGHK	3	VNNGGC(UniMod:4)SNLC(UniMod:4)LLSPGGGHK3	74259.4	81542.5	64990.5
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	VNNGGCSSLCLATPGSR	VNNGGC(UniMod:4)SSLC(UniMod:4)LATPGSR	2	VNNGGC(UniMod:4)SSLC(UniMod:4)LATPGSR2	5337.64	4950.98	6525.03
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	VNNININQGSITFAGGPGR	VNNININQGSITFAGGPGR	2	VNNININQGSITFAGGPGR2	81705.4	98657.8	90408.4
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	VNNININQGSITFAGGPGR	VNNININQGSITFAGGPGR	3	VNNININQGSITFAGGPGR3	97559.4	83886	110192
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	VNNKDLPSPIEK	VNNKDLPSPIEK	3	VNNKDLPSPIEK3	43217.1	46586.9	64464.7
Q66H91	Q66H91	GIT2_RAT	Git2	ARF GTPase-activating protein GIT2	1	VNNNLSGELR	VNNNLSGELR	2	VNNNLSGELR2	4653.47		5959.49
Q9Z2L0	A0A8I5ZUF9;Q9Z2L0	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	0	VNNSSLIGLGYTQTLK	VNNSSLIGLGYTQTLK	2	VNNSSLIGLGYTQTLK2	4992.38	8948.45	8834.19
Q9Z2L0	A0A8I5ZUF9;Q9Z2L0	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	0	VNNSSLIGLGYTQTLKPGIK	VNNSSLIGLGYTQTLKPGIK	3	VNNSSLIGLGYTQTLKPGIK3	491897	490295	568403
Q9Z2L0	A0A8I5ZUF9;Q9Z2L0	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	0	VNNSSLIGLGYTQTLKPGIK	VNNSSLIGLGYTQTLKPGIK	4	VNNSSLIGLGYTQTLKPGIK4		4685.7	
P81155	P81155	VDAC2_RAT	Vdac2	Voltage-dependent anion-selective channel protein 2	1	VNNSSLIGVGYTQTLR	VNNSSLIGVGYTQTLR	2	VNNSSLIGVGYTQTLR2	14903.9	13226.4	24583.4
P81155	P81155	VDAC2_RAT	Vdac2	Voltage-dependent anion-selective channel protein 2	1	VNNSSLIGVGYTQTLRPGVK	VNNSSLIGVGYTQTLRPGVK	3	VNNSSLIGVGYTQTLRPGVK3	157456	131697	155179
A0A0G2K2P3	A0A0G2K2P3	A0A0G2K2P3_RAT	Tnfaip8	TNF alpha induced protein 8	1	VNNVFDHFSDCDFLAALYNPFGK	VNNVFDHFSDC(UniMod:4)DFLAALYNPFGK	3	VNNVFDHFSDC(UniMod:4)DFLAALYNPFGK3	1551.75	6017.58	6200.78
P98105	P98105	LYAM2_RAT	Sele	E-selectin	1	VNNVWIWVGTQKPLTEEAK	VNNVWIWVGTQKPLTEEAK	3	VNNVWIWVGTQKPLTEEAK3	25225.9	15487.9	20017.1
A0A8I6A9M7	A0A8I6A9M7;A0A8I6GHU4	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	0	VNNVYDVDNK	VNNVYDVDNK	2	VNNVYDVDNK2	18576.5	16739.1	22709.5
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	VNNYCVDCEETSK	VNNYC(UniMod:4)VDC(UniMod:4)EETSK	2	VNNYC(UniMod:4)VDC(UniMod:4)EETSK2	49687.8	51296.5	48172.1
Q63615	Q63615	VP33A_RAT	Vps33a	Vacuolar protein sorting-associated protein 33A	1	VNNYIEDCIAQK	VNNYIEDC(UniMod:4)IAQK	2	VNNYIEDC(UniMod:4)IAQK2	7715.96	9612.21	11992.1
P05065	P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	1	VNPCIGGVILFHETLYQK	VNPC(UniMod:4)IGGVILFHETLYQK	3	VNPC(UniMod:4)IGGVILFHETLYQK3	263208	193602	193509
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	VNPCLNGGTCLLVEDHR	VNPC(UniMod:4)LNGGTC(UniMod:4)LLVEDHR	2	VNPC(UniMod:4)LNGGTC(UniMod:4)LLVEDHR2	8783.42	7105.7	8291.18
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	VNPCLNGGTCLLVEDHR	VNPC(UniMod:4)LNGGTC(UniMod:4)LLVEDHR	3	VNPC(UniMod:4)LNGGTC(UniMod:4)LLVEDHR3	105459	113539	95557
P02091	P02091	HBB1_RAT	Hbb	Hemoglobin subunit beta-1	1	VNPDDVGGEALGR	VNPDDVGGEALGR	2	VNPDDVGGEALGR2	3.94524e+06	4.08726e+06	3.75767e+06
P02091	P02091	HBB1_RAT	Hbb	Hemoglobin subunit beta-1	1	VNPDDVGGEALGR	VNPDDVGGEALGR	3	VNPDDVGGEALGR3	47698.3	56658.5	48557.8
Q0D2L6	Q0D2L6	Q0D2L6_RAT	Rragc	Ras-related GTP-binding protein	1	VNPDMNFEVFIHK	VNPDMNFEVFIHK	2	VNPDMNFEVFIHK2	4746.45	3689.93	
Q0D2L6	Q0D2L6	Q0D2L6_RAT	Rragc	Ras-related GTP-binding protein	1	VNPDMNFEVFIHK	VNPDMNFEVFIHK	3	VNPDMNFEVFIHK3	39845.3	24943.8	21197.5
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	VNPDSLK	VNPDSLK	2	VNPDSLK2	135593	177003	160108
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	VNPESTTSVV	VNPESTTSVV	2	VNPESTTSVV2	2848.07	6470.46	
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	VNPFRPGDSESPVAAGAQR	VNPFRPGDSESPVAAGAQR	2	VNPFRPGDSESPVAAGAQR2	32095.1	20053.7	9786.42
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	VNPFRPGDSESPVAAGAQR	VNPFRPGDSESPVAAGAQR	3	VNPFRPGDSESPVAAGAQR3	1.73285e+06	1.63581e+06	1.66354e+06
O54923	O54923	EXOC6_RAT	Exoc6	Exocyst complex component 6	1	VNPHAALTLLEK	VNPHAALTLLEK	3	VNPHAALTLLEK3	32112.5	42349.3	28535.3
P35053	P35053	GPC1_RAT	Gpc1	Glypican-1	1	VNPHGSGPEEK	VNPHGSGPEEK	2	VNPHGSGPEEK2			13223.3
P10888	P10888	COX41_RAT	Cox4i1	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial	1	VNPIQGFSAK	VNPIQGFSAK	2	VNPIQGFSAK2	1.1483e+06	1.27328e+06	1.34928e+06
P21775	P07871;P21775	THIKA_RAT	Acaa1a	3-ketoacyl-CoA thiolase A, peroxisomal	0	VNPLGGAIALGHPLGCTGAR	VNPLGGAIALGHPLGC(UniMod:4)TGAR	3	VNPLGGAIALGHPLGC(UniMod:4)TGAR3	72437	70957.3	89860.3
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	VNPLSLVEIILHVVR	VNPLSLVEIILHVVR	3	VNPLSLVEIILHVVR3	3997.26	781.407	
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	VNPPTLR	VNPPTLR	2	VNPPTLR2	386028	399415	357412
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	VNPSDCVDMVCDAK	VNPSDC(UniMod:4)VDMVC(UniMod:4)DAK	2	VNPSDC(UniMod:4)VDMVC(UniMod:4)DAK2	222481	202406	203392
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	VNPSDCVDMVCDAK	VNPSDC(UniMod:4)VDMVC(UniMod:4)DAK	3	VNPSDC(UniMod:4)VDMVC(UniMod:4)DAK3	13534.9	10144.4	11584
D3ZU48	D3ZU48	D3ZU48_RAT	Klhdc4	Kelch domain containing 4	1	VNPSGVKPTVR	VNPSGVKPTVR	2	VNPSGVKPTVR2	13011.7	7628.02	5345.7
D3ZU48	D3ZU48	D3ZU48_RAT	Klhdc4	Kelch domain containing 4	1	VNPSGVKPTVR	VNPSGVKPTVR	3	VNPSGVKPTVR3	110684	112669	104042
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	VNPSRLPVVIGGLLDVDCSEDVIK	VNPSRLPVVIGGLLDVDC(UniMod:4)SEDVIK	3	VNPSRLPVVIGGLLDVDC(UniMod:4)SEDVIK3	15248.1	19648.6	16053.3
P10111	P10111;A0A8I6A629	PPIA_RAT	Ppia	Peptidyl-prolyl cis-trans isomerase A	0	VNPTVFFDITADGEPLGR	VNPTVFFDITADGEPLGR	2	VNPTVFFDITADGEPLGR2	128169	115497	114818
P10111	P10111;A0A8I6A629	PPIA_RAT	Ppia	Peptidyl-prolyl cis-trans isomerase A	0	VNPTVFFDITADGEPLGR	VNPTVFFDITADGEPLGR	3	VNPTVFFDITADGEPLGR3	163530	155697	134740
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	VNPTVTFSENYTCSDSEEGLEK	VNPTVTFSENYTC(UniMod:4)SDSEEGLEK	3	VNPTVTFSENYTC(UniMod:4)SDSEEGLEK3	2282.73	8821.96	621.104
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	VNPTVTFSENYTCSDSEEGLEKDK	VNPTVTFSENYTC(UniMod:4)SDSEEGLEKDK	3	VNPTVTFSENYTC(UniMod:4)SDSEEGLEKDK3	73581	53168.3	58091.1
A0A0G2JYR1	A0A0G2JYR1	A0A0G2JYR1_RAT	Exoc6b	Exocyst complex component	1	VNPVTALTLLEK	VNPVTALTLLEK	2	VNPVTALTLLEK2	7081.34		6305.58
P24050	P24050	RS5_RAT	Rps5	Small ribosomal subunit protein uS7	1	VNQAIWLLCTGAR	VNQAIWLLC(UniMod:4)TGAR	2	VNQAIWLLC(UniMod:4)TGAR2	15060.3	7168.31	10160.3
Q6AXV4	Q6AXV4	SAM50_RAT	Samm50	Sorting and assembly machinery component 50 homolog	1	VNQELAGYTGGDVSFIK	VNQELAGYTGGDVSFIK	2	VNQELAGYTGGDVSFIK2	31824.8	35813.3	24415
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	VNQELQK	VNQELQK	1	VNQELQK1	4299.55		7378.02
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	VNQELQK	VNQELQK	2	VNQELQK2	125798		169923
A0A8I5ZPZ9	A0A8I5ZPZ9	A0A8I5ZPZ9_RAT	Ptpa	Serine/threonine-protein phosphatase 2A activator	1	VNQGLIR	VNQGLIR	2	VNQGLIR2	42291.6	59806.9	30010.8
P15429	P15429	ENOB_RAT	Eno3	Beta-enolase	1	VNQIGSVTESIQACK	VNQIGSVTESIQAC(UniMod:4)K	2	VNQIGSVTESIQAC(UniMod:4)K2	455466	371270	399048
P15429	P15429	ENOB_RAT	Eno3	Beta-enolase	1	VNQIGSVTESIQACK	VNQIGSVTESIQAC(UniMod:4)K	3	VNQIGSVTESIQAC(UniMod:4)K3			18157.4
P04764	M0R5J4;A0A8I6GJ97;P04764;A0A8I5YC61	ENOA_RAT	Eno1	Alpha-enolase	0	VNQIGSVTESLQACK	VNQIGSVTESLQAC(UniMod:4)K	3	VNQIGSVTESLQAC(UniMod:4)K3	21176.5	21381	19566
A0A0G2K712	A0A0G2K712	A0A0G2K712_RAT	Tbc1d5	TBC1 domain family, member 5	1	VNQIQDHLLK	VNQIQDHLLK	3	VNQIQDHLLK3	1667.12		7319.18
F1M7L9	F1M7L9	PKP2_RAT	Pkp2	Plakophilin-2	1	VNQLQGIPK	VNQLQGIPK	2	VNQLQGIPK2	1457.59	2114.96	
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	VNQPASFAIR	VNQPASFAIR	2	VNQPASFAIR2	11741.2	11639	6081.15
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VNQPASFAVSLNGAK	VNQPASFAVSLNGAK	2	VNQPASFAVSLNGAK2	2.93228e+06	3.02161e+06	3.19546e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VNQPASFAVSLNGAK	VNQPASFAVSLNGAK	3	VNQPASFAVSLNGAK3	211832	198388	213107
Q9Z336	Q9Z336	DYLT1_RAT	Dynlt1	Dynein light chain Tctex-type 1	1	VNQWTTNVVEQTLSQLTK	VNQWTTNVVEQTLSQLTK	3	VNQWTTNVVEQTLSQLTK3	31640.5	27328.5	33109.7
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	VNQYANECAQEQHPK	VNQYANEC(UniMod:4)AQEQHPK	3	VNQYANEC(UniMod:4)AQEQHPK3		5614.22	12078.2
P53676	P53678;P53676	AP3M1_RAT	Ap3m1	AP-3 complex subunit mu-1	0	VNRLDMYGEK	VNRLDMYGEK	3	VNRLDMYGEK3	37646.9	33688.8	47124.2
P33568	P33568	RB_RAT	Rb1	Retinoblastoma-associated protein	1	VNSAANTETQAASAFHTQKPLK	VNSAANTETQAASAFHTQKPLK	4	VNSAANTETQAASAFHTQKPLK4	4557.25	4169.39	5207.91
P20760	P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	1	VNSGAFPAPIEK	VNSGAFPAPIEK	2	VNSGAFPAPIEK2	7.04995e+06	6.42097e+06	6.60749e+06
P20760	P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	1	VNSGAFPAPIEK	VNSGAFPAPIEK	3	VNSGAFPAPIEK3	26555.8	22824.7	21252.9
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	VNSGDTEVGSSLLR	VNSGDTEVGSSLLR	2	VNSGDTEVGSSLLR2	5991.65	10644.6	5670.2
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	VNSILGCSQ	VNSILGC(UniMod:4)SQ	1	VNSILGC(UniMod:4)SQ1	478629	453211	400585
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	VNSILGCSQ	VNSILGC(UniMod:4)SQ	2	VNSILGC(UniMod:4)SQ2	407267	440957	415276
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	VNSIYQDK	VNSIYQDK	2	VNSIYQDK2	32989.1	31360.2	38960.4
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	VNSLGETAQR	VNSLGETAQR	2	VNSLGETAQR2	662540	628843	789125
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	VNSLPEVLPILNSNEAK	VNSLPEVLPILNSNEAK	2	VNSLPEVLPILNSNEAK2	174639	149306	204426
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	VNSLPEVLPILNSNEAK	VNSLPEVLPILNSNEAK	3	VNSLPEVLPILNSNEAK3	115901	122464	152220
F1LNH3	F1LNH3	F1LNH3_RAT	Col6a2	Collagen type VI alpha 2 chain	1	VNSLSSFK	VNSLSSFK	2	VNSLSSFK2	22860.4	21803.8	16566.4
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	VNSMTFTFDK	VNSMTFTFDK	2	VNSMTFTFDK2	16461.7	17778.5	33873.1
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	VNSNSLDLPSSSDTHASK	VNSNSLDLPSSSDTHASK	3	VNSNSLDLPSSSDTHASK3	6036.63	7013.43	
Q32Q07	Q32Q07	LRRN1_RAT	Lrrn1	Leucine-rich repeat neuronal protein 1	1	VNSNVMTSNLK	VNSNVMTSNLK	2	VNSNVMTSNLK2	4072.3	9043.59	6277.89
A0A8I5ZYV2	A0A8I5ZYV2	A0A8I5ZYV2_RAT	Rgp1	RGP1 homolog, RAB6A GEF complex partner 1	1	VNSPITLLR	VNSPITLLR	2	VNSPITLLR2			4657.46
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	VNSQPGPQK	VNSQPGPQK	2	VNSQPGPQK2			45892.9
Q62740	Q62740	SPP24_RAT	Spp2	Secreted phosphoprotein 24	1	VNSQSLSPYLFR	VNSQSLSPYLFR	2	VNSQSLSPYLFR2	2.46881e+06	3.21286e+06	3.02487e+06
Q62740	Q62740	SPP24_RAT	Spp2	Secreted phosphoprotein 24	1	VNSQSLSPYLFR	VNSQSLSPYLFR	3	VNSQSLSPYLFR3	114908	154076	167077
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	VNSSCLTMENK	VNSSC(UniMod:4)LTMENK	2	VNSSC(UniMod:4)LTMENK2	42069.4	53723.4	56831.8
Q9Z272	Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	1	VNSSLSDELR	VNSSLSDELR	2	VNSSLSDELR2	8469.13	14456.3	9184.44
Q9Z272	Q9Z272	GIT1_RAT	Git1	ARF GTPase-activating protein GIT1	1	VNSSLSDELRK	VNSSLSDELRK	3	VNSSLSDELRK3	14493.5	22565.3	11290.2
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	VNSTYLVR	VNSTYLVR	2	VNSTYLVR2	61554.1	81702	69696.4
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	VNSVEQGPFKPPEK	VNSVEQGPFKPPEK	3	VNSVEQGPFKPPEK3	23325.3	30705.4	15727.6
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	VNSVEQGPFKPPEKR	VNSVEQGPFKPPEKR	3	VNSVEQGPFKPPEKR3	9218.17	15001.4	
G3V8Y8	G3V8Y8	G3V8Y8_RAT	Hip1	Huntingtin interacting protein 1	1	VNSVSSCLEQLEK	VNSVSSC(UniMod:4)LEQLEK	2	VNSVSSC(UniMod:4)LEQLEK2	7693.56	4697.35	6851.41
Q66H50	Q66H50	FACR1_RAT	Far1	Fatty acyl-CoA reductase 1	1	VNSVYVLVR	VNSVYVLVR	2	VNSVYVLVR2	6995.41	11428.9	12628.9
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	VNTALQR	VNTALQR	2	VNTALQR2	32160.1	30026.2	28902.6
A0A8I5ZM67	A0A8I5ZM67	A0A8I5ZM67_RAT	Borcs7	BLOC-1-related complex subunit 7	1	VNTCGTDVIALTK	VNTC(UniMod:4)GTDVIALTK	2	VNTC(UniMod:4)GTDVIALTK2	10400.3	9295.94	7751.49
Q9EQV6	Q9EQV6	TPP1_RAT	Tpp1	Tripeptidyl-peptidase 1	1	VNTEFMK	VNTEFMK	2	VNTEFMK2	51838.7	48158.3	38635
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	VNTEIGDLEGLR	VNTEIGDLEGLR	2	VNTEIGDLEGLR2	23109.6	34917.5	30397.9
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	VNTEIGDLEGLR	VNTEIGDLEGLR	3	VNTEIGDLEGLR3	2.33632e+06	3.04697e+06	2.85045e+06
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	VNTFSCLCLPGFVGDK	VNTFSC(UniMod:4)LC(UniMod:4)LPGFVGDK	2	VNTFSC(UniMod:4)LC(UniMod:4)LPGFVGDK2	39218.8	37723.5	29915.6
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	VNTFSCLCLPGFVGDK	VNTFSC(UniMod:4)LC(UniMod:4)LPGFVGDK	3	VNTFSC(UniMod:4)LC(UniMod:4)LPGFVGDK3	10844	10659.4	7235.03
D4A1B2	D4A1B2	D4A1B2_RAT	Arpin	Arpin	1	VNTGFLMSSFK	VNTGFLMSSFK	2	VNTGFLMSSFK2	40102.3	36936.4	45516.3
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	VNTHGIFTISTASMVEK	VNTHGIFTISTASMVEK	3	VNTHGIFTISTASMVEK3	5058.09	6190.68	1750.49
Q9JIK1	Q9JIK1	CDHR5_RAT	Cdhr5	Cadherin-related family member 5	1	VNTIVIPETELK	VNTIVIPETELK	2	VNTIVIPETELK2	1925.67	3995.78	
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	VNTLETEEWFFK	VNTLETEEWFFK	2	VNTLETEEWFFK2	340210	320914	359155
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	VNTLETEEWFFK	VNTLETEEWFFK	3	VNTLETEEWFFK3	7848.43	11237.5	11539
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	VNTLETEEWFFKDITR	VNTLETEEWFFKDITR	3	VNTLETEEWFFKDITR3	7709.54	17627.4	15775.5
A0A0G2JVT8	A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	1	VNTLGDVETK	VNTLGDVETK	2	VNTLGDVETK2	9611.68	9296.33	9754.19
P62752	F1LT35;P62752;D3ZTX9	RL23A_RAT	Rpl23a	Large ribosomal subunit protein uL23	0	VNTLIRPDGEK	VNTLIRPDGEK	2	VNTLIRPDGEK2	2202.92	1044.14	
P62752	F1LT35;P62752;D3ZTX9	RL23A_RAT	Rpl23a	Large ribosomal subunit protein uL23	0	VNTLIRPDGEK	VNTLIRPDGEK	3	VNTLIRPDGEK3	25068.5	31302.1	8381.17
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	VNTLPLNFDK	VNTLPLNFDK	2	VNTLPLNFDK2	214371	119119	180178
Q5XHY5	Q5XHY5	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	1	VNTPTTTVYR	VNTPTTTVYR	2	VNTPTTTVYR2	11019.7	13477.9	8216.46
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	VNTSSALANINLALEQGCALTLLK	VNTSSALANINLALEQGC(UniMod:4)ALTLLK	3	VNTSSALANINLALEQGC(UniMod:4)ALTLLK3	15488.9	7373.6	4154.2
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	VNVAGLVLAGSADFK	VNVAGLVLAGSADFK	2	VNVAGLVLAGSADFK2	64626.2	61615.9	46225.3
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	VNVAGLVLAGSADFK	VNVAGLVLAGSADFK	3	VNVAGLVLAGSADFK3	6297.06	4438.52	5767.07
A0A0G2K6C7	A0A0G2JYE1;A0A0G2K6C7	A0A0G2K6C7_RAT	Trim5	Tripartite motif-containing 5	0	VNVCAQHGEK	VNVC(UniMod:4)AQHGEK	2	VNVC(UniMod:4)AQHGEK2			11320.7
A0A0G2K6C7	A0A0G2JYE1;A0A0G2K6C7	A0A0G2K6C7_RAT	Trim5	Tripartite motif-containing 5	0	VNVCAQHGEK	VNVC(UniMod:4)AQHGEK	3	VNVC(UniMod:4)AQHGEK3			25423.2
M0RCA3	M0RCA3	M0RCA3_RAT	Zfpl1	Zinc finger protein-like 1	1	VNVCEHCLVANHAK	VNVC(UniMod:4)EHC(UniMod:4)LVANHAK	3	VNVC(UniMod:4)EHC(UniMod:4)LVANHAK3	19438.3	16839.3	16673.5
M0RCA3	M0RCA3	M0RCA3_RAT	Zfpl1	Zinc finger protein-like 1	1	VNVCEHCLVANHAK	VNVC(UniMod:4)EHC(UniMod:4)LVANHAK	4	VNVC(UniMod:4)EHC(UniMod:4)LVANHAK4	11219.1	14369.9	10336.1
O88321	O88321	O88321_RAT	Psmd4	26S proteasome non-ATPase regulatory subunit 4	1	VNVDIINFGEEEVNTEK	VNVDIINFGEEEVNTEK	2	VNVDIINFGEEEVNTEK2	50399.2	52959.3	41114.6
O88321	O88321	O88321_RAT	Psmd4	26S proteasome non-ATPase regulatory subunit 4	1	VNVDIINFGEEEVNTEK	VNVDIINFGEEEVNTEK	3	VNVDIINFGEEEVNTEK3	4032.68	1211.69	1069.32
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	VNVEGVHCDR	VNVEGVHC(UniMod:4)DR	2	VNVEGVHC(UniMod:4)DR2	5253.16	4821.61	3542.41
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	VNVEGVHCDR	VNVEGVHC(UniMod:4)DR	3	VNVEGVHC(UniMod:4)DR3	20351.4	15028.5	23439.2
Q99ME0	Q99ME0	Q99ME0_RAT	Ppbp	Pro-platelet basic protein	1	VNVFRPGAHCDNVEVIATLK	VNVFRPGAHC(UniMod:4)DNVEVIATLK	3	VNVFRPGAHC(UniMod:4)DNVEVIATLK3	289662	249645	210162
Q99ME0	Q99ME0	Q99ME0_RAT	Ppbp	Pro-platelet basic protein	1	VNVFRPGAHCDNVEVIATLK	VNVFRPGAHC(UniMod:4)DNVEVIATLK	4	VNVFRPGAHC(UniMod:4)DNVEVIATLK4	2.75487e+06	2.63736e+06	2.37645e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VNVGAGSHPNK	VNVGAGSHPNK	2	VNVGAGSHPNK2			1.05645e+06
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	VNVHGGAVSLGHPIGMSGAR	VNVHGGAVSLGHPIGMSGAR	2	VNVHGGAVSLGHPIGMSGAR2	2719.38		1150.54
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	VNVHGGAVSLGHPIGMSGAR	VNVHGGAVSLGHPIGMSGAR	3	VNVHGGAVSLGHPIGMSGAR3	89151	91752.1	77025.2
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	VNVHGGAVSLGHPIGMSGAR	VNVHGGAVSLGHPIGMSGAR	4	VNVHGGAVSLGHPIGMSGAR4	406628	423987	481011
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	VNVHGIFSVSSAALVEVHK	VNVHGIFSVSSAALVEVHK	3	VNVHGIFSVSSAALVEVHK3	20772.2	22022	11870.9
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	VNVHGIFSVSSAALVEVHK	VNVHGIFSVSSAALVEVHK	4	VNVHGIFSVSSAALVEVHK4	118584	94365.1	108348
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	VNVIHAR	VNVIHAR	2	VNVIHAR2	23272.7	15496.1	18929.3
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	VNVIPPLAQATVNFR	VNVIPPLAQATVNFR	2	VNVIPPLAQATVNFR2	142741	141834	135258
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	VNVIPPLAQATVNFR	VNVIPPLAQATVNFR	3	VNVIPPLAQATVNFR3	30023.8	33818.8	32444.6
Q62740	Q62740	SPP24_RAT	Spp2	Secreted phosphoprotein 24	1	VNVLDEDTLVMNLEFTVQETTCLR	VNVLDEDTLVMNLEFTVQETTC(UniMod:4)LR	3	VNVLDEDTLVMNLEFTVQETTC(UniMod:4)LR3	1694.16		
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	VNVNLLIYLLNK	VNVNLLIYLLNK	2	VNVNLLIYLLNK2	1084.84		
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	VNVPEESR	VNVPEESR	2	VNVPEESR2	519912	507715	487293
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	VNVPGSQAQLK	VNVPGSQAQLK	2	VNVPGSQAQLK2	461337	474883	368381
O35048	O35048	3BHS7_RAT	Hsd3b7	3 beta-hydroxysteroid dehydrogenase type 7	1	VNVQGTQNVIDACVQTGTR	VNVQGTQNVIDAC(UniMod:4)VQTGTR	3	VNVQGTQNVIDAC(UniMod:4)VQTGTR3	1717.72		
Q08603	Q08603	PGTB2_RAT	Rabggtb	Geranylgeranyl transferase type-2 subunit beta	1	VNVQPELVS	VNVQPELVS	2	VNVQPELVS2	19520.5	12798.9	17093.1
P51111	P51111	HD_RAT	Htt	Huntingtin	1	VNVQSPHR	VNVQSPHR	2	VNVQSPHR2	9975.2		20394.2
Q7TS56	Q7TS56	CBR4_RAT	Cbr4	3-oxoacyl-[acyl-carrier-protein] reductase	1	VNVVAPGFIHTDMTK	VNVVAPGFIHTDMTK	3	VNVVAPGFIHTDMTK3	2869.1	12321.9	
A0A8I6GIU6	A0A8I6GIU6;A0A8I6AKZ8	A0A8I6GIU6_RAT	Tial1	Tia1 cytotoxic granule-associated RNA binding protein-like 1	0	VNWATTPSSQK	VNWATTPSSQK	2	VNWATTPSSQK2	3395.16	3916.79	2532.98
Q4FZV0	Q4FZV0	MANBA_RAT	Manba	Beta-mannosidase	1	VNWFHVNPR	VNWFHVNPR	3	VNWFHVNPR3	19806.7	17340.3	15510.3
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	VNWIGCQGSEPHFR	VNWIGC(UniMod:4)QGSEPHFR	3	VNWIGC(UniMod:4)QGSEPHFR3	32431.5	28811.6	26773.5
D3ZWA1	D3ZWA1	D3ZWA1_RAT	Mindy2	Ubiquitin carboxyl-terminal hydrolase	1	VNYEQNMSDAMAILHK	VNYEQNMSDAMAILHK	3	VNYEQNMSDAMAILHK3	13442.4	17576	16301.6
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	VNYHYMSQVK	VNYHYMSQVK	2	VNYHYMSQVK2	3656.31	4665.33	
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	VNYHYMSQVK	VNYHYMSQVK	3	VNYHYMSQVK3	3622.84	6393.56	7080.52
P52303	P52303	AP1B1_RAT	Ap1b1	AP-1 complex subunit beta-1	1	VNYVVQEAIVVIK	VNYVVQEAIVVIK	2	VNYVVQEAIVVIK2	18296.7	20264.9	10698.4
P62944	P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	VNYVVQEAIVVIR	VNYVVQEAIVVIR	2	VNYVVQEAIVVIR2	5438.27	8753.93	
P12007	P12007	IVD_RAT	Ivd	Isovaleryl-CoA dehydrogenase, mitochondrial	1	VPAANILSQESK	VPAANILSQESK	2	VPAANILSQESK2	2531.41	1585.36	
Q5BJP3	Q5BJP3	UFM1_RAT	Ufm1	Ubiquitin-fold modifier 1	1	VPAATSAIITNDGIGINPAQTAGNVFLK	VPAATSAIITNDGIGINPAQTAGNVFLK	3	VPAATSAIITNDGIGINPAQTAGNVFLK3		3849.92	4451.76
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VPAAYAGSLCGLCGNYNK	VPAAYAGSLC(UniMod:4)GLC(UniMod:4)GNYNK	2	VPAAYAGSLC(UniMod:4)GLC(UniMod:4)GNYNK2	223789	202544	192188
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VPAAYAGSLCGLCGNYNK	VPAAYAGSLC(UniMod:4)GLC(UniMod:4)GNYNK	3	VPAAYAGSLC(UniMod:4)GLC(UniMod:4)GNYNK3	244908	223108	194562
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	VPACGISSLNEIINPNYIGMGPFGQPLHGK	VPAC(UniMod:4)GISSLNEIINPNYIGMGPFGQPLHGK	4	VPAC(UniMod:4)GISSLNEIINPNYIGMGPFGQPLHGK4	11191	13833.7	9987.1
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	VPADSSLLCTLSSESPQEAASDAESGK	VPADSSLLC(UniMod:4)TLSSESPQEAASDAESGK	3	VPADSSLLC(UniMod:4)TLSSESPQEAASDAESGK3	9626.9	9629.53	10659.6
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	VPADSSLLCTLSSESPQEAASDAESGKK	VPADSSLLC(UniMod:4)TLSSESPQEAASDAESGKK	3	VPADSSLLC(UniMod:4)TLSSESPQEAASDAESGKK3	11136.6	5102.2	7178.34
D4AC93	D4AC93	D4AC93_RAT	Tmem223	Transmembrane protein 223	1	VPAEAPNR	VPAEAPNR	2	VPAEAPNR2	34050.7	43146.1	30989.2
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	VPAEGSEGTPER	VPAEGSEGTPER	2	VPAEGSEGTPER2	17269.7	28798.6	22143.6
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	VPAENVLGEVGDGFK	VPAENVLGEVGDGFK	2	VPAENVLGEVGDGFK2	33062.3	26528.8	28929.1
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	VPAENVLGEVGDGFK	VPAENVLGEVGDGFK	3	VPAENVLGEVGDGFK3	14175.3	10464.5	11399.8
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	VPAGDSSLDSPSK	VPAGDSSLDSPSK	2	VPAGDSSLDSPSK2	77357.9	76562.5	49335.9
Q01129	Q01129	PGS2_RAT	Dcn	Decorin	1	VPAGLAQHK	VPAGLAQHK	2	VPAGLAQHK2	14634.5	14356.2	17738.4
P47853	P47853	PGS1_RAT	Bgn	Biglycan	1	VPAGLPDLK	VPAGLPDLK	2	VPAGLPDLK2	336805	328457	322297
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	VPAGQSYFVDFGSTECSCPPGGGK	VPAGQSYFVDFGSTEC(UniMod:4)SC(UniMod:4)PPGGGK	3	VPAGQSYFVDFGSTEC(UniMod:4)SC(UniMod:4)PPGGGK3	185753	222109	221815
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	VPAGTLVR	VPAGTLVR	2	VPAGTLVR2	56958.1	34676.1	39471.5
D3ZRN5	D3ZRN5	D3ZRN5_RAT	Ro60	Ro60, Y RNA binding protein	1	VPAGTTDCSLPMIWAQK	VPAGTTDC(UniMod:4)SLPMIWAQK	2	VPAGTTDC(UniMod:4)SLPMIWAQK2	2734.58		
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	VPAHFVALNGNR	VPAHFVALNGNR	3	VPAHFVALNGNR3	17872.5	12870.9	13043.9
A0A8I6AAQ5	A0A8I6AAQ5	A0A8I6AAQ5_RAT	Gask1a	Golgi associated kinase 1A	1	VPAHGQVLQVGLSAGDAHQDISPLR	VPAHGQVLQVGLSAGDAHQDISPLR	4	VPAHGQVLQVGLSAGDAHQDISPLR4	4273.49	6436.6	4968.93
Q3LRZ1	Q3LRZ1	CRTC2_RAT	Crtc2	CREB-regulated transcription coactivator 2	1	VPAIEENLVDDK	VPAIEENLVDDK	2	VPAIEENLVDDK2	1784.16	4624.06	3390.2
P10760	P10760	SAHH_RAT	Ahcy	Adenosylhomocysteinase	1	VPAINVNDSVTK	VPAINVNDSVTK	2	VPAINVNDSVTK2	26994.3	27796.8	23665.8
D3ZKX1	D3ZKX1	D3ZKX1_RAT	Washc3	WASH complex subunit 3	1	VPAIQQK	VPAIQQK	2	VPAIQQK2	54910.7	91192.9	75517.8
P07756	P07756	CPSM_RAT	Cps1	Carbamoyl-phosphate synthase [ammonia], mitochondrial	1	VPAIYGVDTR	VPAIYGVDTR	2	VPAIYGVDTR2	5158.75		
Q32KJ9	Q32KJ9	ARSG_RAT	Arsg	Arylsulfatase G	1	VPALAYWPGR	VPALAYWPGR	2	VPALAYWPGR2	8888.25	3782.23	2944.45
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	VPANLENVNFEVQTIEDDLK	VPANLENVNFEVQTIEDDLK	3	VPANLENVNFEVQTIEDDLK3	89965.6	143657	92656.3
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	VPAPASRPK	VPAPASRPK	2	VPAPASRPK2			3221.92
B3DMA2	B3DMA2	ACD11_RAT	Acad11	Acyl-CoA dehydrogenase family member 11	1	VPASNLILGEGR	VPASNLILGEGR	2	VPASNLILGEGR2	36228.7	22379.6	21394.3
O08679	O08679	MARK2_RAT	Mark2	Serine/threonine-protein kinase MARK2	1	VPASPLPGLDR	VPASPLPGLDR	2	VPASPLPGLDR2	31706.9	19670.4	13045
A0A096MJF9	A0A096MJF9	A0A096MJF9_RAT	Tmem132e	Transmembrane protein 132E	1	VPASQPVAQVLFYVAGR	VPASQPVAQVLFYVAGR	2	VPASQPVAQVLFYVAGR2	3926.25	5321.44	3753.86
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	VPAVAVAPTSVHSSVGR	VPAVAVAPTSVHSSVGR	2	VPAVAVAPTSVHSSVGR2	5142.3	2408.76	
F1M853	F1M853	F1M853_RAT	Rrbp1	Ribosome binding protein 1	1	VPAVAVAPTSVHSSVGR	VPAVAVAPTSVHSSVGR	3	VPAVAVAPTSVHSSVGR3	24523.5	25611.8	32321.6
P05426	A0A8I5ZP24;P05426	RL7_RAT	Rpl7	Large ribosomal subunit protein uL30	0	VPAVPETLK	VPAVPETLK	2	VPAVPETLK2	6702.4	10104.3	9768.91
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	VPCGYDTCYDWEK	VPC(UniMod:4)GYDTC(UniMod:4)YDWEK	2	VPC(UniMod:4)GYDTC(UniMod:4)YDWEK2	9828.29	10803.3	
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	VPCLNSNFGCPFTLAR	VPC(UniMod:4)LNSNFGC(UniMod:4)PFTLAR	2	VPC(UniMod:4)LNSNFGC(UniMod:4)PFTLAR2	40787.6	54439.6	53837.2
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	VPCLNSNFGCPFTLAR	VPC(UniMod:4)LNSNFGC(UniMod:4)PFTLAR	3	VPC(UniMod:4)LNSNFGC(UniMod:4)PFTLAR3	19938.8	21090.4	27396.8
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	VPCNTMFGSQHQMDVAFLEK	VPC(UniMod:4)NTMFGSQHQMDVAFLEK	3	VPC(UniMod:4)NTMFGSQHQMDVAFLEK3	9871.52	14651.1	7443.86
B1WBR6	B1WBR6	B1WBR6_RAT	Tmem129	Tmem129 protein	1	VPCPTCR	VPC(UniMod:4)PTC(UniMod:4)R	2	VPC(UniMod:4)PTC(UniMod:4)R2	12171.1	19304.9	10320.2
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	VPCTVLR	VPC(UniMod:4)TVLR	2	VPC(UniMod:4)TVLR2	474399	352951	364082
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	VPDDIYK	VPDDIYK	2	VPDDIYK2	361855	373731	370800
D4A5U3	D4A5U3	TGM3_RAT	Tgm3	Protein-glutamine gamma-glutamyltransferase E	1	VPDEAEVVVER	VPDEAEVVVER	2	VPDEAEVVVER2	6491.69	3366.98	
P13838	P13838	LEUK_RAT	Spn	Leukosialin (Fragment)	1	VPDEEATTASGSGGNK	VPDEEATTASGSGGNK	2	VPDEEATTASGSGGNK2		48195.1	78232.7
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	VPDEHMIPIENLMNPR	VPDEHMIPIENLMNPR	2	VPDEHMIPIENLMNPR2	45421.9	47374.2	36770.4
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	VPDEHMIPIENLMNPR	VPDEHMIPIENLMNPR	3	VPDEHMIPIENLMNPR3	153109	227620	174206
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	VPDFGVWER	VPDFGVWER	2	VPDFGVWER2	17286.4	28929.1	29324.6
P20788	P20788	UCRI_RAT	Uqcrfs1	Cytochrome b-c1 complex subunit Rieske, mitochondrial	1	VPDFSDYR	VPDFSDYR	2	VPDFSDYR2	125789	95024.3	125013
P20788	P20788	UCRI_RAT	Uqcrfs1	Cytochrome b-c1 complex subunit Rieske, mitochondrial	1	VPDFSDYRR	VPDFSDYRR	3	VPDFSDYRR3	239752	264507	232906
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	VPDHHPC	VPDHHPC(UniMod:4)	2	VPDHHPC(UniMod:4)2			5365.51
D4A0T0	D4A0T0	D4A0T0_RAT	Ndufb10	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10	1	VPDITECK	VPDITEC(UniMod:4)K	2	VPDITEC(UniMod:4)K2	36854.1	30449.8	29993.6
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	VPDLKDLDPIGK	VPDLKDLDPIGK	3	VPDLKDLDPIGK3	17573.7	11471.6	14894.6
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	VPDMAEIQSR	VPDMAEIQSR	2	VPDMAEIQSR2	12578.1	14729.3	21008.5
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	VPDPQMSMENLVESK	VPDPQMSMENLVESK	2	VPDPQMSMENLVESK2	6134.73	10896.7	10519.2
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	VPDQGAAGVR	VPDQGAAGVR	2	VPDQGAAGVR2	45743.3	38225.9	47542.9
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	VPDSTYEMIGGLDK	VPDSTYEMIGGLDK	2	VPDSTYEMIGGLDK2	59776.4	52763.1	63364.6
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	VPDSTYEMIGGLDK	VPDSTYEMIGGLDK	3	VPDSTYEMIGGLDK3	6163.13		6834.65
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	VPDTDEISFLK	VPDTDEISFLK	2	VPDTDEISFLK2	27433.6	21897.2	19621.9
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	VPDTITEWK	VPDTITEWK	2	VPDTITEWK2	4.30203e+06	3.88545e+06	3.65493e+06
A0A0G2JUA5	A0A0G2JUA5	A0A0G2JUA5_RAT	Ahnak	AHNAK nucleoprotein	1	VPDVDIK	VPDVDIK	2	VPDVDIK2		4035.33	
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	VPEAGESLATR	VPEAGESLATR	2	VPEAGESLATR2	29600.8	30146.6	29499.4
P08461	A0A8I6B5J2;P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	0	VPEANSSWMDTVIR	VPEANSSWMDTVIR	2	VPEANSSWMDTVIR2	18483.6	5526.97	10524.7
Q63493	Q63493	CD1D_RAT	Cd1d	Antigen-presenting glycoprotein CD1d	1	VPEAPSWLDLPIK	VPEAPSWLDLPIK	2	VPEAPSWLDLPIK2	26789.4	29233.1	50943.6
Q5M7T5	Q5M7T5	Q5M7T5_RAT	Serpinc1	Antithrombin-III	1	VPEATNR	VPEATNR	2	VPEATNR2			620547
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	VPECLYTLPNLHR	VPEC(UniMod:4)LYTLPNLHR	2	VPEC(UniMod:4)LYTLPNLHR2	19437.1	27475.1	13227.8
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	VPECLYTLPNLHR	VPEC(UniMod:4)LYTLPNLHR	3	VPEC(UniMod:4)LYTLPNLHR3	657931	725820	682413
Q5EB81	Q5EB81	NB5R1_RAT	Cyb5r1	NADH-cytochrome b5 reductase 1	1	VPEDPTQCFLLFANQTEK	VPEDPTQC(UniMod:4)FLLFANQTEK	3	VPEDPTQC(UniMod:4)FLLFANQTEK3	5473.78	7512.75	3851.59
D3ZWA1	D3ZWA1	D3ZWA1_RAT	Mindy2	Ubiquitin carboxyl-terminal hydrolase	1	VPEDVEEGAAEPPR	VPEDVEEGAAEPPR	2	VPEDVEEGAAEPPR2	24785.9	13896.3	21926.4
D3ZET9	D4A1G8;D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	0	VPEEALK	VPEEALK	2	VPEEALK2	102308	128210	110544
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	VPEEDLK	VPEEDLK	2	VPEEDLK2	163692	193292	205107
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	VPEEDLKR	VPEEDLKR	2	VPEEDLKR2	82346.8	85760.9	42737.2
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	VPEEEKETNVQVLMVLGAGR	VPEEEKETNVQVLMVLGAGR	3	VPEEEKETNVQVLMVLGAGR3	10317.9	6858.39	6527.82
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	VPEESAAEEPASPEESSGLSLLHQESK	VPEESAAEEPASPEESSGLSLLHQESK	3	VPEESAAEEPASPEESSGLSLLHQESK3	9122.37		10214.6
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	VPEGFTCDCFDGYR	VPEGFTC(UniMod:4)DC(UniMod:4)FDGYR	2	VPEGFTC(UniMod:4)DC(UniMod:4)FDGYR2	45760.4	44144.4	40026.8
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	VPEGFTCDCFDGYR	VPEGFTC(UniMod:4)DC(UniMod:4)FDGYR	3	VPEGFTC(UniMod:4)DC(UniMod:4)FDGYR3	4855.51	9024.61	7754.89
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	VPEGGEGISATEVDSR	VPEGGEGISATEVDSR	2	VPEGGEGISATEVDSR2	25929.6	23466	17350.9
A0A8I6GEF9	A0A8I6GEF9	A0A8I6GEF9_RAT	Mrpl58	Mitochondrial ribosomal protein L58	1	VPEHAEQASSDIPLDR	VPEHAEQASSDIPLDR	3	VPEHAEQASSDIPLDR3	8361.05		
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	VPEHYTLLDHLPSPK	VPEHYTLLDHLPSPK	3	VPEHYTLLDHLPSPK3	19807.3	21566.6	21247.9
A0A8I6AAE4	A0A8I6AAE4	A0A8I6AAE4_RAT	Arhgap6	Rho GTPase activating protein 6	1	VPEHYTLLDHLPSPK	VPEHYTLLDHLPSPK	4	VPEHYTLLDHLPSPK4	104485	99989.9	92801.3
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	VPEIISSIR	VPEIISSIR	2	VPEIISSIR2	19566.3	17123.9	12668.3
P86411	P86411	RGPA2_RAT	Ralgapa2	Ral GTPase-activating protein subunit alpha-2	1	VPELDGAGATEQDK	VPELDGAGATEQDK	2	VPELDGAGATEQDK2	6012.14	5266.77	2793.16
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	VPELMEMFLPATK	VPELMEMFLPATK	2	VPELMEMFLPATK2		5791.57	7958.55
G3V9L1	G3V9L1	G3V9L1_RAT	Tex2	Testis expressed 2	1	VPEMEAK	VPEMEAK	2	VPEMEAK2	21178.2	22856.7	24630.2
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	VPENLLPFAVQCR	VPENLLPFAVQC(UniMod:4)R	2	VPENLLPFAVQC(UniMod:4)R2	25663.1	18502.6	22406.9
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	VPENLLPFAVQCR	VPENLLPFAVQC(UniMod:4)R	3	VPENLLPFAVQC(UniMod:4)R3	9816.98	3379.42	9325.98
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	VPENTMQAMQQK	VPENTMQAMQQK	2	VPENTMQAMQQK2	3.38646e+06	3.71948e+06	3.44889e+06
Q9Z1P2	Q9Z1P2	ACTN1_RAT	Actn1	Alpha-actinin-1	1	VPENTMQAMQQK	VPENTMQAMQQK	3	VPENTMQAMQQK3	534719	576484	634003
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	VPENVDAAK	VPENVDAAK	2	VPENVDAAK2	32419.1	17627.5	35120.9
Q63532	Q63532	SPR1A_RAT	Sprr1a	Cornifin-A	1	VPEPCQPK	VPEPC(UniMod:4)QPK	2	VPEPC(UniMod:4)QPK2	27550.9	26408.9	37941
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	VPEPEQPALPSLDPSR	VPEPEQPALPSLDPSR	2	VPEPEQPALPSLDPSR2	25354.7	22598.5	20250.4
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	VPEPEQPALPSLDPSR	VPEPEQPALPSLDPSR	3	VPEPEQPALPSLDPSR3	26189.7	28296.9	54272.2
Q6IE70	Q6IE70	PAN2_RAT	Pan2	PAN2-PAN3 deadenylation complex catalytic subunit Pan2	1	VPEPESQSSPK	VPEPESQSSPK	2	VPEPESQSSPK2	12984.2	9763.75	10589.8
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	VPEPFTLSEAAAPPSDHSAPPSR	VPEPFTLSEAAAPPSDHSAPPSR	3	VPEPFTLSEAAAPPSDHSAPPSR3	138896	147367	138645
A0A8I6ACY9	A0A8I6ACY9	A0A8I6ACY9_RAT	Vps37b	VPS37B subunit of ESCRT-I	1	VPEPSPATALPYPPLEATGLPSVVPR	VPEPSPATALPYPPLEATGLPSVVPR	3	VPEPSPATALPYPPLEATGLPSVVPR3	27277.6	17947.9	20395.9
Q5RJQ0	Q5RJQ0	CHST1_RAT	Chst1	Carbohydrate sulfotransferase 1	1	VPEVNDLR	VPEVNDLR	2	VPEVNDLR2	47209.3	48003	38165
P52632	P52632;Q62771	STA5B_RAT	Stat5b	Signal transducer and activator of transcription 5B	0	VPFAVPDK	VPFAVPDK	2	VPFAVPDK2	51618.8	35703.6	39211
P13264	P13264	GLSK_RAT	Gls	Glutaminase kidney isoform, mitochondrial	1	VPFCLQSCVKPLK	VPFC(UniMod:4)LQSC(UniMod:4)VKPLK	3	VPFC(UniMod:4)LQSC(UniMod:4)VKPLK3	16252.4	11599.3	7805.86
P60123	A0A0G2K0H9;P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	0	VPFCPMVGSEVYSTEIK	VPFC(UniMod:4)PMVGSEVYSTEIK	2	VPFC(UniMod:4)PMVGSEVYSTEIK2	32461.7	35099.9	41230.4
P60123	A0A0G2K0H9;P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	0	VPFCPMVGSEVYSTEIK	VPFC(UniMod:4)PMVGSEVYSTEIK	3	VPFC(UniMod:4)PMVGSEVYSTEIK3	6762.36		7512.31
P60123	A0A0G2K0H9;P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	0	VPFCPMVGSEVYSTEIKK	VPFC(UniMod:4)PMVGSEVYSTEIKK	3	VPFC(UniMod:4)PMVGSEVYSTEIKK3	42286.4	41882.2	42906.5
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	VPFDAATLHTSTAMAAQHGMDDDGTGQK	VPFDAATLHTSTAMAAQHGMDDDGTGQK	3	VPFDAATLHTSTAMAAQHGMDDDGTGQK3	30852.6	22651.4	19781.2
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	VPFDAATLHTSTAMAAQHGMDDDGTGQK	VPFDAATLHTSTAMAAQHGMDDDGTGQK	4	VPFDAATLHTSTAMAAQHGMDDDGTGQK4	823465	830369	911421
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	VPFESEDNQGIVYAWVGR	VPFESEDNQGIVYAWVGR	3	VPFESEDNQGIVYAWVGR3	58296	66375.8	71671.9
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	VPFFIVVSK	VPFFIVVSK	2	VPFFIVVSK2	32378.1	38669	38700.4
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VPFFYSEPVNVLNSLEINDAFDEPR	VPFFYSEPVNVLNSLEINDAFDEPR	3	VPFFYSEPVNVLNSLEINDAFDEPR3	128605	180443	147184
Q5U1Z9	Q5U1Z9	Q5U1Z9_RAT	Mtx2	Metaxin 2	1	VPFIHVGNQVVSELGPIIQFVK	VPFIHVGNQVVSELGPIIQFVK	3	VPFIHVGNQVVSELGPIIQFVK3	32455.2	36519.7	44030.9
Q9Z1L0	Q9Z1L0	PK3CB_RAT	Pik3cb	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform	1	VPFILTYDFIHVIQQGK	VPFILTYDFIHVIQQGK	3	VPFILTYDFIHVIQQGK3		3664.01	6258.01
P17988	P17988	ST1A1_RAT	Sult1a1	Sulfotransferase 1A1	1	VPFLEFK	VPFLEFK	2	VPFLEFK2	14461.1	5683.16	11629.8
P54645	P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	1	VPFLVAETPR	VPFLVAETPR	2	VPFLVAETPR2	67879.6	69658.2	75125.5
B0K025	B0K025	OSTC_RAT	Ostc	Oligosaccharyltransferase complex subunit OSTC	1	VPFLVLECPNLK	VPFLVLEC(UniMod:4)PNLK	2	VPFLVLEC(UniMod:4)PNLK2	228581	227484	277934
B0K025	B0K025	OSTC_RAT	Ostc	Oligosaccharyltransferase complex subunit OSTC	1	VPFLVLECPNLK	VPFLVLEC(UniMod:4)PNLK	3	VPFLVLEC(UniMod:4)PNLK3	10937.7	10170.6	7412.64
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	VPFNINFDSLPR	VPFNINFDSLPR	2	VPFNINFDSLPR2	3601.56	9137.28	4260.32
Q5U2V8	Q5U2V8	EMC3_RAT	Emc3	ER membrane protein complex subunit 3	1	VPFPLTLR	VPFPLTLR	2	VPFPLTLR2	25087.6	16118.5	25058.2
Q5XIL2	Q5XIL2	P4K2B_RAT	Pi4k2b	Phosphatidylinositol 4-kinase type 2-beta	1	VPFSEETR	VPFSEETR	2	VPFSEETR2	20007.7	12693.5	18779.4
A0A8I5ZS67	A0A8I5ZS67	A0A8I5ZS67_RAT	Gigyf2	GRB10 interacting GYF protein 2	1	VPFSPGPAPPPHMGELDQER	VPFSPGPAPPPHMGELDQER	3	VPFSPGPAPPPHMGELDQER3	15237.4	15617.4	22900.5
Q99M64	Q99M64	P4K2A_RAT	Pi4k2a	Phosphatidylinositol 4-kinase type 2-alpha	1	VPFSQEIK	VPFSQEIK	2	VPFSQEIK2	15195.5	19042.5	12035.2
A0A0G2K0A0	A0A0G2K0A0	A0A0G2K0A0_RAT	Cyth4	Cytohesin 4	1	VPFYDLLSAR	VPFYDLLSAR	2	VPFYDLLSAR2	6526.86	7729.85	
P30427	P30427	PLEC_RAT	Plec	Plectin	1	VPGAQDGVR	VPGAQDGVR	2	VPGAQDGVR2	10191.2	19760.2	
Q02253	Q02253	MMSA_RAT	Aldh6a1	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial	1	VPGATMLLAK	VPGATMLLAK	2	VPGATMLLAK2	224071	196238	213748
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	VPGDQTSTTIR	VPGDQTSTTIR	2	VPGDQTSTTIR2	303606	351056	357481
B0BNH1	B0BNH1	B0BNH1_RAT	Gnptg	N-acetylglucosamine-1-phosphate transferase subunit gamma	1	VPGETHPTQLAGDSK	VPGETHPTQLAGDSK	3	VPGETHPTQLAGDSK3	77152.1	35084.3	54514.4
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	VPGFSDDPTELQCR	VPGFSDDPTELQC(UniMod:4)R	2	VPGFSDDPTELQC(UniMod:4)R2	18812.6	5520.42	14113.6
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	VPGGICGCGSGESGCAVCGCCK	VPGGIC(UniMod:4)GC(UniMod:4)GSGESGC(UniMod:4)AVC(UniMod:4)GC(UniMod:4)C(UniMod:4)K	3	VPGGIC(UniMod:4)GC(UniMod:4)GSGESGC(UniMod:4)AVC(UniMod:4)GC(UniMod:4)C(UniMod:4)K3	5960.66	3126.86	2674.65
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	VPGGLPVSNLR	VPGGLPVSNLR	2	VPGGLPVSNLR2	36100.1	29359.6	43461
D3ZGA5	D3ZGA5	D3ZGA5_RAT	Rilp	Rab interacting lysosomal protein	1	VPGLLLEAMK	VPGLLLEAMK	2	VPGLLLEAMK2	10132.6	10714.9	7318.25
A0A0G2JYE0	A0A0G2JYE0	A0A0G2JYE0_RAT	Atxn2l	Ataxin 2-like	1	VPGLQNEQK	VPGLQNEQK	2	VPGLQNEQK2	69747	64755.9	60553
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	VPGLTGCVEPGEAPQMR	VPGLTGC(UniMod:4)VEPGEAPQMR	2	VPGLTGC(UniMod:4)VEPGEAPQMR2	192685	174793	187977
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	VPGLTGCVEPGEAPQMR	VPGLTGC(UniMod:4)VEPGEAPQMR	3	VPGLTGC(UniMod:4)VEPGEAPQMR3	165206	141631	147530
P31721	P31721	C1QB_RAT	C1qb	Complement C1q subcomponent subunit B	1	VPGLYYFTYHASSR	VPGLYYFTYHASSR	2	VPGLYYFTYHASSR2	2349.72	4643.43	
P31721	P31721	C1QB_RAT	C1qb	Complement C1q subcomponent subunit B	1	VPGLYYFTYHASSR	VPGLYYFTYHASSR	3	VPGLYYFTYHASSR3	4505.54	5181.16	6867.74
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	VPGMPMSDQYVK	VPGMPMSDQYVK	2	VPGMPMSDQYVK2	85864.6	64474.7	63807.3
F1M2D4	F1M2D4	F1M2D4_RAT	Arhgap23	Rho GTPase activating protein 23	1	VPGNNAVVSSLQEQLNR	VPGNNAVVSSLQEQLNR	2	VPGNNAVVSSLQEQLNR2	1175.67	3232.38	3622.63
F1M2D4	F1M2D4	F1M2D4_RAT	Arhgap23	Rho GTPase activating protein 23	1	VPGNNAVVSSLQEQLNR	VPGNNAVVSSLQEQLNR	3	VPGNNAVVSSLQEQLNR3	3640.83		2616.1
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	VPGPVDAYEIQFIPMTEGVSPPFTAR	VPGPVDAYEIQFIPMTEGVSPPFTAR	3	VPGPVDAYEIQFIPMTEGVSPPFTAR3	2396	8534.16	5674.52
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	VPGQCCPDCSAGCTYTGR	VPGQC(UniMod:4)C(UniMod:4)PDC(UniMod:4)SAGC(UniMod:4)TYTGR	3	VPGQC(UniMod:4)C(UniMod:4)PDC(UniMod:4)SAGC(UniMod:4)TYTGR3	58570.5	63026.8	67495.7
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	VPGQEETVK	VPGQEETVK	2	VPGQEETVK2	316306	300682	281454
P16310	P16310	GHR_RAT	Ghr	Growth hormone receptor	1	VPGSIQLYYAR	VPGSIQLYYAR	2	VPGSIQLYYAR2	15498.1	6803.65	9003.69
M0RCI5	M0RCI5	M0RCI5_RAT	Pla2g12b	Phospholipase A2, group XIIB	1	VPGSMDLGIPAMTK	VPGSMDLGIPAMTK	2	VPGSMDLGIPAMTK2	9740.17		12261.4
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	VPGSPAAAAAASCTTDMTFGGLASPK	VPGSPAAAAAASC(UniMod:4)TTDMTFGGLASPK	3	VPGSPAAAAAASC(UniMod:4)TTDMTFGGLASPK3	4511.39	8526.72	7659.74
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	VPGSQVEVNDIK	VPGSQVEVNDIK	2	VPGSQVEVNDIK2	115450	119843	98044.7
D3ZUX7	D3ZUX7	D3ZUX7_RAT	Acsf3	Acyl-CoA synthetase family member 3	1	VPGSVGTPLPGVEVR	VPGSVGTPLPGVEVR	2	VPGSVGTPLPGVEVR2			8642.54
A0A0G2K4R1	A0A0G2K4R1	A0A0G2K4R1_RAT	Ppp1r12c	Protein phosphatase 1 regulatory subunit	1	VPGVENAEGPAQR	VPGVENAEGPAQR	2	VPGVENAEGPAQR2	71680.4	75951.7	61198.1
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	VPGYEDQVTISGLEPDHK	VPGYEDQVTISGLEPDHK	3	VPGYEDQVTISGLEPDHK3	85362.5	90628.2	77934.3
A0A8J8YRV3	A0A8J8YRV3	A0A8J8YRV3_RAT	Drg1	Developmentally regulated GTP binding protein 1	1	VPHCVPISAHHR	VPHC(UniMod:4)VPISAHHR	3	VPHC(UniMod:4)VPISAHHR3	884.414	2183.48	
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	VPHNAAVQVYDYR	VPHNAAVQVYDYR	2	VPHNAAVQVYDYR2	18095.5	13427.5	15174
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	VPHNAAVQVYDYR	VPHNAAVQVYDYR	3	VPHNAAVQVYDYR3	243848	241591	277197
A0A8I5ZRG3	A0A8I5ZRG3	A0A8I5ZRG3_RAT	Frmd4b	FERM domain containing 4B	1	VPHNPYATLR	VPHNPYATLR	3	VPHNPYATLR3	9002.07	5206.27	6970.03
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	VPHSLDLSSPNMANTVNAALKPLETLSR	VPHSLDLSSPNMANTVNAALKPLETLSR	4	VPHSLDLSSPNMANTVNAALKPLETLSR4	53122.6	27350.4	31505.3
O08561	O08561	PI4KB_RAT	Pi4kb	Phosphatidylinositol 4-kinase beta	1	VPHTQAVVLNSK	VPHTQAVVLNSK	3	VPHTQAVVLNSK3	21522.5	14810.5	17270.7
Q5XXR3	Q5XXR3	ARHG6_RAT	Arhgef6	Rho guanine nucleotide exchange factor 6	1	VPIAGMVVTR	VPIAGMVVTR	2	VPIAGMVVTR2	19103.3	17474.5	9006.53
D4ACF2	D4ACF2	D4ACF2_RAT	Trim21	RING-type E3 ubiquitin transferase	1	VPIEEAAK	VPIEEAAK	2	VPIEEAAK2	28057.3	14865.7	19171.8
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	VPIENIISSYR	VPIENIISSYR	2	VPIENIISSYR2	67523.8	44057.9	51925
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	VPIENIISSYRPGTLLWHVSNQR	VPIENIISSYRPGTLLWHVSNQR	3	VPIENIISSYRPGTLLWHVSNQR3	122883	56882.6	74776.5
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	VPIENIISSYRPGTLLWHVSNQR	VPIENIISSYRPGTLLWHVSNQR	4	VPIENIISSYRPGTLLWHVSNQR4	530594	437672	504397
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	VPIGGLNHKPSVGFDVIR	VPIGGLNHKPSVGFDVIR	4	VPIGGLNHKPSVGFDVIR4	7053.53	10257.3	8325.58
A0A8I5ZT10	A0A8I5ZT10	A0A8I5ZT10_RAT	Ccm2	CCM2 scaffold protein	1	VPIHDIAAVSYVR	VPIHDIAAVSYVR	3	VPIHDIAAVSYVR3	26291.3	27134.4	25732.2
D3ZF19	D3ZF19	D3ZF19_RAT	Tmem68	Transmembrane protein 68	1	VPIIPMFTQNIR	VPIIPMFTQNIR	2	VPIIPMFTQNIR2	18829.3	32771.4	26571.4
Q05511	Q05511	HEPS_RAT	Hpn	Serine protease hepsin	1	VPIISNEVCNSPDFYGNQIKPK	VPIISNEVC(UniMod:4)NSPDFYGNQIKPK	3	VPIISNEVC(UniMod:4)NSPDFYGNQIKPK3	7523.7	9482.9	5719.85
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	VPIIVPVMMLAIK	VPIIVPVMMLAIK	2	VPIIVPVMMLAIK2	71416.1	287.423	
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	VPIIVPVMMLAIK	VPIIVPVMMLAIK	3	VPIIVPVMMLAIK3		8237.08	14643.9
P56932	P56932	2ABD_RAT	Ppp2r2d	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform	1	VPILKPMDLMVEASPR	VPILKPMDLMVEASPR	3	VPILKPMDLMVEASPR3	17516.7	15808.6	16137.3
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	VPINPTFISMAIGR	VPINPTFISMAIGR	2	VPINPTFISMAIGR2	15171.6	17490.9	17199.2
D3Z868	D3Z868	D3Z868_RAT	Tex11	Protein ZIP4 homolog	1	VPINVLR	VPINVLR	2	VPINVLR2	616857		607839
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	VPIPVDR	VPIPVDR	2	VPIPVDR2	93991.9	87689.1	110910
A0A8I5ZNK2	A0A8I5ZNK2	A0A8I5ZNK2_RAT	Oxsr1	non-specific serine/threonine protein kinase	1	VPISLVLR	VPISLVLR	2	VPISLVLR2	117558	97232.4	92372.5
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	VPITAVIAAK	VPITAVIAAK	2	VPITAVIAAK2	117261	93873.4	100751
Q6AYE2	Q6AYE2	SHLB1_RAT	Sh3glb1	Endophilin-B1	1	VPITYLELLN	VPITYLELLN	2	VPITYLELLN2	5672.56	2499.75	4309.44
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	VPIVINPNAYDNLAIYK	VPIVINPNAYDNLAIYK	2	VPIVINPNAYDNLAIYK2	12614.8	9944.33	7561.53
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	VPIVNHLEFLRDEELEER	VPIVNHLEFLRDEELEER	3	VPIVNHLEFLRDEELEER3	15638.9	4917.34	10211.8
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	VPIVNHLEFLRDEELEER	VPIVNHLEFLRDEELEER	4	VPIVNHLEFLRDEELEER4	16838.7	32233.7	24661.2
P21588	P21588	5NTD_RAT	Nt5e	5'-nucleotidase	1	VPIYEPLEMDK	VPIYEPLEMDK	2	VPIYEPLEMDK2	10640.3	13759.1	7927.12
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	VPKPTGVK	VPKPTGVK	2	VPKPTGVK2	38479.4	52869.6	40243.8
Q641X9	Q641X9	RM09_RAT	Mrpl9	Large ribosomal subunit protein bL9m	1	VPLAGEGR	VPLAGEGR	2	VPLAGEGR2	24511.2	17732.3	23976.1
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VPLAIVNK	VPLAIVNK	1	VPLAIVNK1		2980.89	
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VPLAIVNK	VPLAIVNK	2	VPLAIVNK2	567784	593051	579091
Q5I0D7	Q5I0D7	PEPD_RAT	Pepd	Xaa-Pro dipeptidase	1	VPLALFALNR	VPLALFALNR	2	VPLALFALNR2	10875.4	14077.3	15035.8
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	VPLEVQEADEVK	VPLEVQEADEVK	2	VPLEVQEADEVK2	42525.7	52773.2	38983
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	VPLHLESPHEER	VPLHLESPHEER	3	VPLHLESPHEER3	55870.3	70512.9	34485.4
B5DFI7	B5DFI7	B5DFI7_RAT	Qpctl	glutaminyl-peptide cyclotransferase	1	VPLIGSLSEAK	VPLIGSLSEAK	2	VPLIGSLSEAK2	25533.4	19470.2	17284.1
D3ZK56	D3ZK56	D3ZK56_RAT	Rap2c	Ras-related protein Rap-2	1	VPLILVGNK	VPLILVGNK	2	VPLILVGNK2	41760.9	42038.8	52121.2
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	VPLIPASSK	VPLIPASSK	2	VPLIPASSK2	35998.9	43366.4	27720
F1LP90	F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	1	VPLKPYAAPVPR	VPLKPYAAPVPR	3	VPLKPYAAPVPR3	15579.3	11805.8	10829.1
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	VPLLFSDEEDSEVPSGVKPVDLK	VPLLFSDEEDSEVPSGVKPVDLK	3	VPLLFSDEEDSEVPSGVKPVDLK3	31142.7	34061.1	28840.1
M0R3X1	M0R3X1	M0R3X1_RAT	Psapl1	Proactivator polypeptide-like 1	1	VPLLGTDQCVMGPR	VPLLGTDQC(UniMod:4)VMGPR	2	VPLLGTDQC(UniMod:4)VMGPR2	1703.76	1226.81	4115.32
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	VPLLLEEQGVVDYFLR	VPLLLEEQGVVDYFLR	2	VPLLLEEQGVVDYFLR2	16924.8	23672.5	13222.4
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	VPLLLEEQGVVDYFLR	VPLLLEEQGVVDYFLR	3	VPLLLEEQGVVDYFLR3	58971.6	58093.6	49542
Q5U2N0	Q5U2N0	PYRG2_RAT	Ctps2	CTP synthase 2	1	VPLLLEEQGVVK	VPLLLEEQGVVK	2	VPLLLEEQGVVK2	7051.86	8254.75	
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	VPLLLSDLSLLWK	VPLLLSDLSLLWK	2	VPLLLSDLSLLWK2	4227.15	6941.61	
F1LLW8	F1LLW8	F1LLW8_RAT	Ids	Iduronate 2-sulfatase	1	VPLMFYVPGK	VPLMFYVPGK	2	VPLMFYVPGK2	9172.12	6014.21	7841.29
P08461	P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	1	VPLPSLSPTMQAGTIAR	VPLPSLSPTMQAGTIAR	2	VPLPSLSPTMQAGTIAR2	51392.2	54663.3	51252.3
P08461	P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	1	VPLPSLSPTMQAGTIAR	VPLPSLSPTMQAGTIAR	3	VPLPSLSPTMQAGTIAR3	11826.8	8188.67	8314.27
Q63691	Q63691	CD14_RAT	Cd14	Monocyte differentiation antigen CD14	1	VPLQALDLSHNSLR	VPLQALDLSHNSLR	3	VPLQALDLSHNSLR3	24304	21564.8	25958
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	VPLQGFAALEGMNGIQK	VPLQGFAALEGMNGIQK	2	VPLQGFAALEGMNGIQK2	3072.3	5741.68	7560.8
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	VPLQGFAALEGMNGIQK	VPLQGFAALEGMNGIQK	3	VPLQGFAALEGMNGIQK3		12412.4	8674.98
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	VPLQNPPIK	VPLQNPPIK	2	VPLQNPPIK2	202907	151173	149793
Q3LRZ1	Q3LRZ1	CRTC2_RAT	Crtc2	CREB-regulated transcription coactivator 2	1	VPLSPLSLPAGPADAR	VPLSPLSLPAGPADAR	2	VPLSPLSLPAGPADAR2	3096.27	1366.49	
D4A929	D4A929	WDR81_RAT	Wdr81	WD repeat-containing protein 81	1	VPLTAVAVMPAPHTSITMASSDSTLR	VPLTAVAVMPAPHTSITMASSDSTLR	3	VPLTAVAVMPAPHTSITMASSDSTLR3	5535.87	9151.83	
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	VPLVAEKPLKEPK	VPLVAEKPLKEPK	3	VPLVAEKPLKEPK3	18056.3	14965	10297.8
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	VPLVAPEDLR	VPLVAPEDLR	2	VPLVAPEDLR2	11981.2	12621.2	17447
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	VPLVAPEDLRDDVIENAPTAHTEEYSGEEK	VPLVAPEDLRDDVIENAPTAHTEEYSGEEK	4	VPLVAPEDLRDDVIENAPTAHTEEYSGEEK4	31838.2	31783.5	44395.5
F1M332	F1M332	F1M332_RAT	Arhgap28	Rho GTPase activating protein 28	1	VPLVLQK	VPLVLQK	2	VPLVLQK2	60286.3	55504	38294.1
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	VPLVSNEECQTR	VPLVSNEEC(UniMod:4)QTR	2	VPLVSNEEC(UniMod:4)QTR2	8481.89	6113.35	
O08561	O08561	PI4KB_RAT	Pi4kb	Phosphatidylinositol 4-kinase beta	1	VPLWIKPYK	VPLWIKPYK	3	VPLWIKPYK3	2411.46	2499	4135.3
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	VPMADKPGNTVNFR	VPMADKPGNTVNFR	3	VPMADKPGNTVNFR3	12448.6	14984.5	9268.85
M0R3L8	M0R3L8	M0R3L8_RAT	Gba	Glucosylceramidase	1	VPMASCDFSIR	VPMASC(UniMod:4)DFSIR	2	VPMASC(UniMod:4)DFSIR2	71099.5	51302.2	49008.2
P61227	P61227	RAP2B_RAT	Rap2b	Ras-related protein Rap-2b	1	VPMILVGNK	VPMILVGNK	1	VPMILVGNK1	1355.89		2274.06
P61227	P61227	RAP2B_RAT	Rap2b	Ras-related protein Rap-2b	1	VPMILVGNK	VPMILVGNK	2	VPMILVGNK2	302474	268798	251762
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	VPMLSSK	VPMLSSK	1	VPMLSSK1	62258.1	36702.9	34228
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	VPMLSSK	VPMLSSK	2	VPMLSSK2	2.46368e+07	2.23031e+07	2.14091e+07
A0A8J8XL70	A0A8J8XL70	A0A8J8XL70_RAT	Serpinf1	Serpin family F member 1	1	VPMMSDPK	VPMMSDPK	2	VPMMSDPK2	226933	157158	149488
P31211	P31211	CBG_RAT	Serpina6	Corticosteroid-binding globulin	1	VPMMVQSGSIGYFR	VPMMVQSGSIGYFR	2	VPMMVQSGSIGYFR2	67210.7	60764.3	52298.6
P31211	P31211	CBG_RAT	Serpina6	Corticosteroid-binding globulin	1	VPMMVQSGSIGYFR	VPMMVQSGSIGYFR	3	VPMMVQSGSIGYFR3	34832.3	20036.2	19460.8
P47861	P47861	SYT5_RAT	Syt5	Synaptotagmin-5	1	VPMSSVNLGR	VPMSSVNLGR	2	VPMSSVNLGR2	17331.1	12992.5	10501
P47861	P47861	SYT5_RAT	Syt5	Synaptotagmin-5	1	VPMSSVNLGRPVQAWR	VPMSSVNLGRPVQAWR	3	VPMSSVNLGRPVQAWR3	20295.2	32371.4	24728.7
Q641X9	Q641X9	RM09_RAT	Mrpl9	Large ribosomal subunit protein bL9m	1	VPMSVVLFR	VPMSVVLFR	2	VPMSVVLFR2	9732.1	2353.91	5377.55
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	VPMTPGVK	VPMTPGVK	2	VPMTPGVK2	1.38942e+06	1.14606e+06	1.47901e+06
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	VPNAISVYDEIISVTACATYTYGK	VPNAISVYDEIISVTAC(UniMod:4)ATYTYGK	3	VPNAISVYDEIISVTAC(UniMod:4)ATYTYGK3		20266.4	13369.3
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	VPNAISVYDEIISVTACATYTYGKPVPGR	VPNAISVYDEIISVTAC(UniMod:4)ATYTYGKPVPGR	4	VPNAISVYDEIISVTAC(UniMod:4)ATYTYGKPVPGR4	54934.2	69857	66948.2
E9PSP1	E9PSP1	E9PSP1_RAT	Pltp	Phospholipid transfer protein	1	VPNDLDMLLR	VPNDLDMLLR	2	VPNDLDMLLR2	29017.4	19728.3	27523.7
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	VPNFDQSDSDGDGVGDACDNCPQK	VPNFDQSDSDGDGVGDAC(UniMod:4)DNC(UniMod:4)PQK	3	VPNFDQSDSDGDGVGDAC(UniMod:4)DNC(UniMod:4)PQK3	578407	623338	644672
Q66H61	Q66H61	SYQ_RAT	Qars1	Glutamine--tRNA ligase	1	VPNFPADETK	VPNFPADETK	2	VPNFPADETK2	51271.6	39593.3	55306.3
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	VPNHAVFSR	VPNHAVFSR	2	VPNHAVFSR2	35284.7	27908.7	22795.4
A0A8I6AKR4	A0A8I6AKR4;A0A8I6GKU5	A0A8I6AKR4_RAT	Ap3s1	Adaptor related protein complex 3 subunit sigma 1	0	VPNLPSFK	VPNLPSFK	2	VPNLPSFK2	92471.8	69500.7	83773.2
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	VPNNNLPIPER	VPNNNLPIPER	2	VPNNNLPIPER2	31683.7	28535.8	34953.3
Q3B7U1	Q3B7U1	Q3B7U1_RAT	Maged2	MAGE family member D2	1	VPNSNPPEYEFFWGLR	VPNSNPPEYEFFWGLR	2	VPNSNPPEYEFFWGLR2	14902.6	8769.34	10316.3
Q3B7U1	Q3B7U1	Q3B7U1_RAT	Maged2	MAGE family member D2	1	VPNSNPPEYEFFWGLR	VPNSNPPEYEFFWGLR	3	VPNSNPPEYEFFWGLR3	8473.84		8689.74
P56558	P56558	OGT1_RAT	Ogt	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	VPNSVLWLLR	VPNSVLWLLR	2	VPNSVLWLLR2	11380.5	7807.95	3944.75
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VPNSYAK	VPNSYAK	1	VPNSYAK1	24985.6	29957.3	20533.4
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VPNSYAK	VPNSYAK	2	VPNSYAK2	2.61374e+06	2.48153e+06	2.43563e+06
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	VPNYQALLR	VPNYQALLR	2	VPNYQALLR2	21978.3	22696.4	19220.5
P62425	F1M1M2;P62425;A0A8I6AUG1;M0R3M3;D3ZU22;D4A8X2;A0A8I6AMN7;D3ZPL5;A0A8I6B5R5	RL7A_RAT	Rpl7a	Large ribosomal subunit protein eL8	0	VPPAINQFTQALDR	VPPAINQFTQALDR	2	VPPAINQFTQALDR2	26003.7	22876	19901.5
P62425	F1M1M2;P62425;A0A8I6AUG1;M0R3M3;D3ZU22;D4A8X2;A0A8I6AMN7;D3ZPL5;A0A8I6B5R5	RL7A_RAT	Rpl7a	Large ribosomal subunit protein eL8	0	VPPAINQFTQALDR	VPPAINQFTQALDR	3	VPPAINQFTQALDR3	11220.4	6190.32	8842.78
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	VPPAPPPEAPGR	VPPAPPPEAPGR	2	VPPAPPPEAPGR2	10605.7	5382.52	
P50503	P50503;A0A8I6GLD3	F10A1_RAT	St13	Hsc70-interacting protein	0	VPPATHK	VPPATHK	1	VPPATHK1			10032
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	VPPAVIIPPAAPLSGR	VPPAVIIPPAAPLSGR	2	VPPAVIIPPAAPLSGR2	17846.9	5303.21	16099.6
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	VPPAVIIPPAAPLSGR	VPPAVIIPPAAPLSGR	3	VPPAVIIPPAAPLSGR3	19859.1	11000.2	13291.8
Q6DKG0	Q6DKG0	NAA35_RAT	Naa35	N-alpha-acetyltransferase 35, NatC auxiliary subunit	1	VPPEFDFSVHK	VPPEFDFSVHK	3	VPPEFDFSVHK3		11910.3	5845.33
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	VPPEFLVQR	VPPEFLVQR	2	VPPEFLVQR2	85280	93038.5	82027.2
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	VPPETIDSVIVGNVMQSSSDAAYLAR	VPPETIDSVIVGNVMQSSSDAAYLAR	3	VPPETIDSVIVGNVMQSSSDAAYLAR3	34190.5	30266.8	41443.4
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	VPPETIDSVIVGNVMQSSSDAAYLAR	VPPETIDSVIVGNVMQSSSDAAYLAR	4	VPPETIDSVIVGNVMQSSSDAAYLAR4	8020.83		10841.1
P85125	P85125	CAVN1_RAT	Cavin1	Caveolae-associated protein 1	1	VPPFTFHVK	VPPFTFHVK	2	VPPFTFHVK2	34606.6	42515.9	27122.8
Q9WVM4	Q9WVM4	ICMT_RAT	Icmt	Protein-S-isoprenylcysteine O-methyltransferase	1	VPPGSEAR	VPPGSEAR	2	VPPGSEAR2			4351.01
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	VPPGVGPAIPEEDTDTASEESLGESK	VPPGVGPAIPEEDTDTASEESLGESK	3	VPPGVGPAIPEEDTDTASEESLGESK3	100235	134120	115809
Q3B8N7	Q3B8N7	T22D4_RAT	Tsc22d4	TSC22 domain family protein 4	1	VPPIDSRPNSPALYFDASLVHK	VPPIDSRPNSPALYFDASLVHK	4	VPPIDSRPNSPALYFDASLVHK4	15574.9	18264.3	10710
P51111	P51111	HD_RAT	Htt	Huntingtin	1	VPPLVWK	VPPLVWK	2	VPPLVWK2	89174.9	90669.8	102046
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	VPPNGLVVYCGTIVTEEGKEK	VPPNGLVVYC(UniMod:4)GTIVTEEGKEK	3	VPPNGLVVYC(UniMod:4)GTIVTEEGKEK3	30631.8	35204.4	19202.7
Q5FVH0	Q5FVH0	C1QT5_RAT	C1qtnf5	Complement C1q tumor necrosis factor-related protein 5	1	VPPPADTPLPFDR	VPPPADTPLPFDR	2	VPPPADTPLPFDR2	106500	102904	92866.2
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	VPPPTLSR	VPPPTLSR	2	VPPPTLSR2	34829.2	26222.8	22512.8
Q6MG88	Q6MG88	GPSM3_RAT	Gpsm3	G-protein-signaling modulator 3	1	VPPSLAPTPPR	VPPSLAPTPPR	2	VPPSLAPTPPR2	156567	149168	98953.5
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	VPPTGYLLSFDTPGGQIQEILLPAGTTSHR	VPPTGYLLSFDTPGGQIQEILLPAGTTSHR	4	VPPTGYLLSFDTPGGQIQEILLPAGTTSHR4	127985	173219	152232
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	VPPTPHWK	VPPTPHWK	2	VPPTPHWK2	39201.6		
P29419	P29419	ATP5I_RAT	Atp5me	ATP synthase subunit e, mitochondrial	1	VPPVQVSPLIK	VPPVQVSPLIK	2	VPPVQVSPLIK2	404282	257644	287172
P29419	P29419	ATP5I_RAT	Atp5me	ATP synthase subunit e, mitochondrial	1	VPPVQVSPLIK	VPPVQVSPLIK	3	VPPVQVSPLIK3	13010.7	16396.8	22204.6
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	VPQAAPTGPAGPPMASVNVFSR	VPQAAPTGPAGPPMASVNVFSR	3	VPQAAPTGPAGPPMASVNVFSR3	15005.9	12225.8	14980.4
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	VPQASPRPYSSVPVGSEKPPK	VPQASPRPYSSVPVGSEKPPK	3	VPQASPRPYSSVPVGSEKPPK3	4727.6	2207.32	3326.85
P97924	P97924	KALRN_RAT	Kalrn	Kalirin	1	VPQASPRPYSSVPVGSEKPPK	VPQASPRPYSSVPVGSEKPPK	4	VPQASPRPYSSVPVGSEKPPK4	78042.8	69926.8	93900.7
Q9JMB5	Q9JMB5	ADRM1_RAT	Adrm1	Proteasomal ubiquitin receptor ADRM1	1	VPQCPSGR	VPQC(UniMod:4)PSGR	2	VPQC(UniMod:4)PSGR2	26487.5		19362.6
O54748	O54748	STK3_RAT	Stk3	Serine/threonine-protein kinase 3	1	VPQDGDFDFLK	VPQDGDFDFLK	2	VPQDGDFDFLK2	173585	236133	246040
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	VPQFSFSR	VPQFSFSR	2	VPQFSFSR2	57569.2	58555.4	71280.2
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	VPQHGQGLGQK	VPQHGQGLGQK	2	VPQHGQGLGQK2			7750.02
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VPQIEVETHK	VPQIEVETHK	2	VPQIEVETHK2	32290	27688.3	29059
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VPQIEVETHK	VPQIEVETHK	3	VPQIEVETHK3	337499	461814	354031
Q32Q07	Q32Q07	LRRN1_RAT	Lrrn1	Leucine-rich repeat neuronal protein 1	1	VPQLALQK	VPQLALQK	2	VPQLALQK2	22761.1	32086.4	22681.7
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	VPQLGPR	VPQLGPR	2	VPQLGPR2	81315.7	46418.7	52848.2
A0A8I6ASK1	A0A8I6ASK1	A0A8I6ASK1_RAT	P4ha2	procollagen-proline 4-dioxygenase	1	VPQLLIAPFKEEDEWDSPHIVR	VPQLLIAPFKEEDEWDSPHIVR	4	VPQLLIAPFKEEDEWDSPHIVR4	13609.3	15656.8	23349.7
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	VPQLNQMVR	VPQLNQMVR	2	VPQLNQMVR2	42853.9	37579.8	47380.5
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	VPQPACR	VPQPAC(UniMod:4)R	1	VPQPAC(UniMod:4)R1	44130	36544.4	32987.2
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	VPQPACREPFLSCCK	VPQPAC(UniMod:4)REPFLSC(UniMod:4)C(UniMod:4)K	2	VPQPAC(UniMod:4)REPFLSC(UniMod:4)C(UniMod:4)K2	3789.01	6239.29	3530.39
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	VPQPACREPFLSCCK	VPQPAC(UniMod:4)REPFLSC(UniMod:4)C(UniMod:4)K	3	VPQPAC(UniMod:4)REPFLSC(UniMod:4)C(UniMod:4)K3	276792	517885	569689
Q5M7T7	Q5M7T7	Q5M7T7_RAT	Pla2g7	Phospholipase A2 group VII	1	VPQPLFFINSAEFQTPK	VPQPLFFINSAEFQTPK	3	VPQPLFFINSAEFQTPK3	267919	269521	340926
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	VPQPLIAGMYLMMSVDTVIPPGEK	VPQPLIAGMYLMMSVDTVIPPGEK	3	VPQPLIAGMYLMMSVDTVIPPGEK3			9991.58
Q5XI64	Q5XI64	ABHD6_RAT	Abhd6	Monoacylglycerol lipase ABHD6	1	VPQQILQGLVDVR	VPQQILQGLVDVR	2	VPQQILQGLVDVR2	1995.01		
Q5XI64	Q5XI64	ABHD6_RAT	Abhd6	Monoacylglycerol lipase ABHD6	1	VPQQILQGLVDVR	VPQQILQGLVDVR	3	VPQQILQGLVDVR3	22551.7		
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VPQTDMTFR	VPQTDMTFR	2	VPQTDMTFR2	4.963e+06	5.90122e+06	5.80101e+06
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	VPRDEAFGCYYQEK	VPRDEAFGC(UniMod:4)YYQEK	3	VPRDEAFGC(UniMod:4)YYQEK3		9535	6943.2
A0A096MJY7	A0A096MJY7	A0A096MJY7_RAT	Lsm14a	LSM14A mRNA processing body assembly factor	1	VPRPENEQLR	VPRPENEQLR	3	VPRPENEQLR3	22793.8	26751	23452.8
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	VPRPFGSVSSPK	VPRPFGSVSSPK	3	VPRPFGSVSSPK3	107268	120272	108715
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	VPRPTAQPEEEDEDEVSMK	VPRPTAQPEEEDEDEVSMK	3	VPRPTAQPEEEDEDEVSMK3	39678.6	38760.1	45049.7
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	VPSALYAQDALQLWEVTAR	VPSALYAQDALQLWEVTAR	3	VPSALYAQDALQLWEVTAR3	235528	259197	196601
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	VPSAPGQESPVPDTESTAPMR	VPSAPGQESPVPDTESTAPMR	3	VPSAPGQESPVPDTESTAPMR3	5459.34	4037.34	
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	VPSDELFLIDEYGGK	VPSDELFLIDEYGGK	2	VPSDELFLIDEYGGK2	177393	175387	147965
P55281	P55281	CAD17_RAT	Cdh17	Cadherin-17	1	VPSDELFLIDEYGGK	VPSDELFLIDEYGGK	3	VPSDELFLIDEYGGK3	60404.4	56389.9	94211.8
P34901	P34901	SDC4_RAT	Sdc4	Syndecan-4	1	VPSEPKELEENEVIPK	VPSEPKELEENEVIPK	3	VPSEPKELEENEVIPK3		5780.96	
O35977	O35977	O35977_RAT	Gfra2	GDNF family receptor alpha-2	1	VPSEYTYR	VPSEYTYR	2	VPSEYTYR2	128686	99253.8	101728
F1M332	F1M332	F1M332_RAT	Arhgap28	Rho GTPase activating protein 28	1	VPSFLITQVR	VPSFLITQVR	2	VPSFLITQVR2	8853.68	14689.7	10271.4
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	VPSGGQELTSEFNEVLESYQLLCNR	VPSGGQELTSEFNEVLESYQLLC(UniMod:4)NR	3	VPSGGQELTSEFNEVLESYQLLC(UniMod:4)NR3	22913.8	33677.9	22140
B2GUY0	B2GUY0	MA1B1_RAT	Man1b1	Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase	1	VPSGGYSSINNVQNSHKPEPR	VPSGGYSSINNVQNSHKPEPR	4	VPSGGYSSINNVQNSHKPEPR4	4493.24	9942.14	10352
A0A0G2K089	A0A0G2K089	A0A0G2K089_RAT	Dennd4c	DENN domain containing 4C	1	VPSGLFDTNNR	VPSGLFDTNNR	2	VPSGLFDTNNR2	7573.37	6891.37	
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	VPSHVPFLLIGGGTAAFAAAR	VPSHVPFLLIGGGTAAFAAAR	3	VPSHVPFLLIGGGTAAFAAAR3	37743.1	49137.1	43998.5
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	VPSHVVVAR	VPSHVVVAR	2	VPSHVVVAR2	31297	23289.1	21504.2
P97578	P97578	FEZ2_RAT	Fez2	Fasciculation and elongation protein zeta-2	1	VPSLLTDYILK	VPSLLTDYILK	2	VPSLLTDYILK2	15999.7	7957.39	3989.16
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	VPSMESLFR	VPSMESLFR	2	VPSMESLFR2	17433.1	14399.6	18920.8
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	VPSNITDVAPHLTK	VPSNITDVAPHLTK	3	VPSNITDVAPHLTK3	23996.1	22070.3	16741.3
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	VPSPGISFTYCENPVLR	VPSPGISFTYC(UniMod:4)ENPVLR	2	VPSPGISFTYC(UniMod:4)ENPVLR2	9957.11	14756.8	12083.1
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	VPSPGISFTYCENPVLR	VPSPGISFTYC(UniMod:4)ENPVLR	3	VPSPGISFTYC(UniMod:4)ENPVLR3	20998.8	20544.8	16133.3
F1LSG8	F1LSG8	VPS50_RAT	Vps50	Syndetin	1	VPSPHLNQLVILTSGDTLYGLAER	VPSPHLNQLVILTSGDTLYGLAER	3	VPSPHLNQLVILTSGDTLYGLAER3	17912.6	16483.7	16904.4
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	VPSPLTDEEGDFILIHHEDLR	VPSPLTDEEGDFILIHHEDLR	3	VPSPLTDEEGDFILIHHEDLR3	5247.18	4505.14	1805.45
Q5FVK6	Q5FVK6	C2D1B_RAT	Cc2d1b	Coiled-coil and C2 domain-containing protein 1B	1	VPSPLTDEEGDFILIHHEDLR	VPSPLTDEEGDFILIHHEDLR	4	VPSPLTDEEGDFILIHHEDLR4	45088	43467.3	40021.9
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	VPSSASAYDQR	VPSSASAYDQR	2	VPSSASAYDQR2	14535.1	14406.2	19318.4
P50398	P50398	GDIA_RAT	Gdi1	Rab GDP dissociation inhibitor alpha	1	VPSTETEALASNLMGMFEK	VPSTETEALASNLMGMFEK	3	VPSTETEALASNLMGMFEK3	29008.5	18306.1	27048.3
Q5FWU3	Q5FWU3	ATG9A_RAT	Atg9a	Autophagy-related protein 9A	1	VPSTMTGSGVDAR	VPSTMTGSGVDAR	2	VPSTMTGSGVDAR2	15699.8	14037.1	16915.7
Q6AXM6	Q6AXM6	Q6AXM6_RAT	Icam2	Intercellular adhesion molecule 2	1	VPSVKPLESLTLSLLCGR	VPSVKPLESLTLSLLC(UniMod:4)GR	3	VPSVKPLESLTLSLLC(UniMod:4)GR3	87221.4	44152.8	64671.8
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	VPSVSSSALVSSLHLLK	VPSVSSSALVSSLHLLK	3	VPSVSSSALVSSLHLLK3	21786.7	18532.4	22543.3
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	VPTANLEDVLPLAEDLTEILSR	VPTANLEDVLPLAEDLTEILSR	3	VPTANLEDVLPLAEDLTEILSR3	6231.77	414108	478818
A0A8I6G5Q1	A0A8I6G5Q1	A0A8I6G5Q1_RAT	Sema4d	Semaphorin 4D	1	VPTDREDSQR	VPTDREDSQR	2	VPTDREDSQR2			6650.87
D3ZHA1	D3ZHA1	D3ZHA1_RAT	B4gat1	Beta-1,4-glucuronyltransferase 1	1	VPTFDER	VPTFDER	2	VPTFDER2	18771.6	16748	11887.3
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	VPTHVPVCVLGNYR	VPTHVPVC(UniMod:4)VLGNYR	3	VPTHVPVC(UniMod:4)VLGNYR3	35601.4	47027.3	44294.9
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	VPTIFLSK	VPTIFLSK	2	VPTIFLSK2	11079.4	3988.63	11580.4
Q08163	Q08163;P52481	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	0	VPTISINK	VPTISINK	1	VPTISINK1	7485.47	3217.73	2733.54
Q08163	Q08163;P52481	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	0	VPTISINK	VPTISINK	2	VPTISINK2	3.44974e+06	2.91084e+06	2.91392e+06
P13107	P13107;G3V9D2	CP2B3_RAT	Cyp2b3	Cytochrome P450 2B3	0	VPTLDDR	VPTLDDR	2	VPTLDDR2	7042.78	19379.2	13145.3
E9PSX4	E9PSX4	E9PSX4_RAT	Il3ra	Interleukin 3 receptor subunit alpha	1	VPTLDTVSVR	VPTLDTVSVR	2	VPTLDTVSVR2	19665.2	18129.6	26585.6
Q6XUX2	Q6XUX2	DUSTY_RAT	Dstyk	Dual serine/threonine and tyrosine protein kinase	1	VPTLEIIR	VPTLEIIR	2	VPTLEIIR2	15568.7	12204.9	22467.7
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	VPTLLLR	VPTLLLR	2	VPTLLLR2	971213	927388	882313
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	VPTLVLYALQICK	VPTLVLYALQIC(UniMod:4)K	2	VPTLVLYALQIC(UniMod:4)K2	17576.3	18782.5	19203.9
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	VPTLVLYALQICK	VPTLVLYALQIC(UniMod:4)K	3	VPTLVLYALQIC(UniMod:4)K3	2711.66	6637.48	4250.08
P58751	P58751	RELN_RAT	Reln	Reelin	1	VPTLVSVVINPELQTPATK	VPTLVSVVINPELQTPATK	3	VPTLVSVVINPELQTPATK3	100616	101580	101863
P11345	P11345	RAF1_RAT	Raf1	RAF proto-oncogene serine/threonine-protein kinase	1	VPTMCVDWSNIR	VPTMC(UniMod:4)VDWSNIR	2	VPTMC(UniMod:4)VDWSNIR2		5366.82	4672.13
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	VPTPCAPGR	VPTPC(UniMod:4)APGR	2	VPTPC(UniMod:4)APGR2	22348.1	17824.5	19635.4
P04797	F1LUV3;Q9ESV6;M0R660;E9PTN6;M0R7H7;A0A8I5ZWK4;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	VPTPNVSVVDLTCR	VPTPNVSVVDLTC(UniMod:4)R	2	VPTPNVSVVDLTC(UniMod:4)R2	2.20178e+06	2.04158e+06	2.22525e+06
P04797	F1LUV3;Q9ESV6;M0R660;E9PTN6;M0R7H7;A0A8I5ZWK4;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	VPTPNVSVVDLTCR	VPTPNVSVVDLTC(UniMod:4)R	3	VPTPNVSVVDLTC(UniMod:4)R3	475958	521624	569827
Q5XI64	Q5XI64	ABHD6_RAT	Abhd6	Monoacylglycerol lipase ABHD6	1	VPTQIIWGK	VPTQIIWGK	2	VPTQIIWGK2	49325.3	56287.6	54080.4
Q63691	Q63691	CD14_RAT	Cd14	Monocyte differentiation antigen CD14	1	VPTQILFGTLR	VPTQILFGTLR	2	VPTQILFGTLR2	30124.5	24469.2	20850.5
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	VPTTEKPTVTVNFR	VPTTEKPTVTVNFR	2	VPTTEKPTVTVNFR2	6187.03	4940.65	
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	VPTTEKPTVTVNFR	VPTTEKPTVTVNFR	3	VPTTEKPTVTVNFR3	106437	94349.8	91360.2
P82471	P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	1	VPTTGIIEYPFDLQSVIFR	VPTTGIIEYPFDLQSVIFR	3	VPTTGIIEYPFDLQSVIFR3	23774.6	28962.5	35523.4
D4A453	D4A453	D4A453_RAT	Cdc34	Cell division cycle 34, ubiqiutin conjugating enzyme	1	VPTTLAEYCVK	VPTTLAEYC(UniMod:4)VK	2	VPTTLAEYC(UniMod:4)VK2	5024.37	10031.1	6630.64
Q9R064	Q9R064	GORS2_RAT	Gorasp2	Golgi reassembly-stacking protein 2	1	VPTTVEDR	VPTTVEDR	2	VPTTVEDR2	127953	123648	117972
P14056	P14056	ARAF_RAT	Araf	Serine/threonine-protein kinase A-Raf	1	VPTVCVDMSTNR	VPTVC(UniMod:4)VDMSTNR	2	VPTVC(UniMod:4)VDMSTNR2	9491.85	11539.7	
D3ZUQ1	D3ZUQ1	D3ZUQ1_RAT	Lipo1	Lipase	1	VPTVMFTGLK	VPTVMFTGLK	2	VPTVMFTGLK2	1.06515e+06	1.12778e+06	1.06835e+06
Q4KM74	Q4KM74	SC22B_RAT	Sec22b	Vesicle-trafficking protein SEC22b	1	VPTVSRPYSFIEFDTFIQK	VPTVSRPYSFIEFDTFIQK	3	VPTVSRPYSFIEFDTFIQK3	5650.64	2619.26	9909.56
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	VPTVVTAPSGK	VPTVVTAPSGK	2	VPTVVTAPSGK2	10311.1	17271	14105
Q9JIL3	Q9JIL3	ILF3_RAT	Ilf3	Interleukin enhancer-binding factor 3	1	VPTWGPLR	VPTWGPLR	2	VPTWGPLR2	4731.42	4339.34	3778.76
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	VPVAPCAQHLDCDSCLAHR	VPVAPC(UniMod:4)AQHLDC(UniMod:4)DSC(UniMod:4)LAHR	4	VPVAPC(UniMod:4)AQHLDC(UniMod:4)DSC(UniMod:4)LAHR4	8091.38	4681.08	5576.57
A0A8I5ZXX2	A0A8I5ZXX2	A0A8I5ZXX2_RAT	Kdm3b	Lysine-specific demethylase	1	VPVAQWPALTFTPLVDK	VPVAQWPALTFTPLVDK	2	VPVAQWPALTFTPLVDK2	2316.32		1388.86
O08679	O08679	MARK2_RAT	Mark2	Serine/threonine-protein kinase MARK2	1	VPVASPSAHNISSSSGAPDR	VPVASPSAHNISSSSGAPDR	3	VPVASPSAHNISSSSGAPDR3	25304.3	23792.1	21314
A0A8I6G3R2	A0A8I6G3R2	A0A8I6G3R2_RAT	Cbl	E3 ubiquitin-protein ligase CBL	1	VPVATPNPGDPWNGR	VPVATPNPGDPWNGR	2	VPVATPNPGDPWNGR2	45427.4	47275.2	27274.9
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	VPVDEFDGK	VPVDEFDGK	2	VPVDEFDGK2	18197.9	6975.14	27818.4
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	VPVDGPPIDIGR	VPVDGPPIDIGR	2	VPVDGPPIDIGR2	51762.7	88004.1	65483.4
P30427	A0A8I6AHY5;P30427	PLEC_RAT	Plec	Plectin	0	VPVDVAYQR	VPVDVAYQR	2	VPVDVAYQR2	13439.7	11539.4	9025.97
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	VPVENVLGEVGGGFK	VPVENVLGEVGGGFK	2	VPVENVLGEVGGGFK2	46125.4	39580.9	45487.9
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	VPVENVLGEVGGGFK	VPVENVLGEVGGGFK	3	VPVENVLGEVGGGFK3	9763.08	14543	14097.8
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	VPVESCGQYR	VPVESC(UniMod:4)GQYR	2	VPVESC(UniMod:4)GQYR2	82126.5	74477.8	82705.2
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	VPVFGTSTHTLDISQLGDLGTR	VPVFGTSTHTLDISQLGDLGTR	3	VPVFGTSTHTLDISQLGDLGTR3	6055.2	10446.6	7131.47
P36876	P36876	2ABA_RAT	Ppp2r2a	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	1	VPVFRPMDLMVEASPR	VPVFRPMDLMVEASPR	3	VPVFRPMDLMVEASPR3	67077.4	54096.5	69783.4
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	VPVGFYQR	VPVGFYQR	2	VPVGFYQR2	52500.6	41051.6	38431.3
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VPVHDVTDASK	VPVHDVTDASK	2	VPVHDVTDASK2	1.64606e+06	1.35108e+06	1.38419e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VPVHDVTDASK	VPVHDVTDASK	3	VPVHDVTDASK3	26854	20590.8	25697.1
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	VPVHSVSVTK	VPVHSVSVTK	2	VPVHSVSVTK2	45989.2	37433.2	30167.3
Q10473	Q10473	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	1	VPVHVIR	VPVHVIR	2	VPVHVIR2	24228.1	22794.7	22163.5
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	VPVIALVGNDAGWTQISR	VPVIALVGNDAGWTQISR	2	VPVIALVGNDAGWTQISR2	6757.63		
D4ACG2	D4ACG2	D4ACG2_RAT	Ilvbl	2-hydroxyacyl-CoA lyase 2	1	VPVIALVGNDAGWTQISR	VPVIALVGNDAGWTQISR	3	VPVIALVGNDAGWTQISR3	1316.46		3814.71
A0A0G2JTW1	A0A0G2JTW1	A0A0G2JTW1_RAT	Rap2a	Ras-related protein Rap-2	1	VPVILVGNK	VPVILVGNK	2	VPVILVGNK2	69154.2	61347.6	73681.5
Q7TPL3	Q7TPL3	BACD3_RAT	Kctd10	BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3	1	VPVITSSK	VPVITSSK	2	VPVITSSK2	16575.7	13269.7	16796.1
A0A8I6AS77	A0A8I6AS77	A0A8I6AS77_RAT	Ly6g6c	Lymphocyte antigen 6 family member G6C	1	VPVLGCVDR	VPVLGC(UniMod:4)VDR	2	VPVLGC(UniMod:4)VDR2	26460.1	30407.3	18196.5
B0BNB0	B0BNB0	B0BNB0_RAT	Golt1b	Golgi transport 1B	1	VPVLGSLLNLPGIR	VPVLGSLLNLPGIR	2	VPVLGSLLNLPGIR2	1447.82	2636.58	1570.25
Q6DGF9	Q6DGF9	ACBD4_RAT	Acbd4	Acyl-CoA-binding domain-containing protein 4	1	VPVLSPVPAESELPHLHTGTGDSAQR	VPVLSPVPAESELPHLHTGTGDSAQR	4	VPVLSPVPAESELPHLHTGTGDSAQR4		10446.3	12115.5
A0A8I5Y1D5	A0A8I5Y1D5	A0A8I5Y1D5_RAT	Mtmr1	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	VPVLSWIHPESQATITR	VPVLSWIHPESQATITR	3	VPVLSWIHPESQATITR3	13163.3	7659.71	16197.6
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	VPVLVESR	VPVLVESR	2	VPVLVESR2	84143	72109.8	60087.9
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	VPVLVESRPFYTSYLR	VPVLVESRPFYTSYLR	3	VPVLVESRPFYTSYLR3	79952.4	108864	72062
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	VPVMMLSSVPELHGYIDK	VPVMMLSSVPELHGYIDK	3	VPVMMLSSVPELHGYIDK3	14379.8	15067.4	9240.66
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VPVNLLR	VPVNLLR	2	VPVNLLR2	554070	641393	499745
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	VPVNWNHVNKPPYPALGGNMK	VPVNWNHVNKPPYPALGGNMK	4	VPVNWNHVNKPPYPALGGNMK4	33061.2	22647.3	16566.9
A0JPJ7	A0JPJ7	OLA1_RAT	Ola1	Obg-like ATPase 1	1	VPVPDER	VPVPDER	2	VPVPDER2	60271.7	48523.3	36274.8
Q9Z1I6	Q9Z1I6	ARHG1_RAT	Arhgef1	Rho guanine nucleotide exchange factor 1	1	VPVPPSVAFELDR	VPVPPSVAFELDR	2	VPVPPSVAFELDR2	76073.3	81679.8	81306
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	VPVPSQQLFEPSR	VPVPSQQLFEPSR	2	VPVPSQQLFEPSR2	22092.6	18416.7	22355.7
Q5FVQ9	Q5FVQ9	TBCE_RAT	Tbce	Tubulin-specific chaperone E	1	VPVSELLLSYESSK	VPVSELLLSYESSK	2	VPVSELLLSYESSK2	2935.85	2467.81	4914.27
Q6PEC3	Q6PEC3	YIF1B_RAT	Yif1b	Protein YIF1B	1	VPVSQPGMADPHQFFDDTSSAPSR	VPVSQPGMADPHQFFDDTSSAPSR	3	VPVSQPGMADPHQFFDDTSSAPSR3	11829.6	7510.23	13848.9
Q2YDU8	Q2YDU8	SPNS1_RAT	Spns1	Protein spinster homolog 1	1	VPVSSVLI	VPVSSVLI	1	VPVSSVLI1	8798.28		5691.25
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	VPVTHETQEECLGMAVLDMMR	VPVTHETQEEC(UniMod:4)LGMAVLDMMR	3	VPVTHETQEEC(UniMod:4)LGMAVLDMMR3	13823.2	17650.3	14683.1
B5DFC3	B5DFC3	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	1	VPVTQATR	VPVTQATR	2	VPVTQATR2	90559.3	82339.6	80497
Q5PPJ9	Q5PPJ9	SHLB2_RAT	Sh3glb2	Endophilin-B2	1	VPVTYLELLS	VPVTYLELLS	2	VPVTYLELLS2	6598.46		10028
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	VPVVEIK	VPVVEIK	2	VPVVEIK2	38956.2	44272.3	41040.3
P01026	P01026	CO3_RAT	C3	Complement C3	1	VPVVTQGSDAQALTQDDGVAK	VPVVTQGSDAQALTQDDGVAK	3	VPVVTQGSDAQALTQDDGVAK3	61402.4	32706.1	59977.2
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	VPVVVCR	VPVVVC(UniMod:4)R	2	VPVVVC(UniMod:4)R2	47415.9	44855.1	56251.9
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	VPVWYIMDEFGSR	VPVWYIMDEFGSR	2	VPVWYIMDEFGSR2	3622.37	4594.06	2671.39
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	VPVWYIMDEFGSR	VPVWYIMDEFGSR	3	VPVWYIMDEFGSR3	2111.61	4731.29	994.411
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	VPVYQEMGR	VPVYQEMGR	2	VPVYQEMGR2	12828.5	12720.3	9994.39
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	VPVYSAEQR	VPVYSAEQR	2	VPVYSAEQR2	32861.1	25188.2	24374.9
P43884	P43884	PLIN1_RAT	Plin1	Perilipin-1	1	VPWLHNLAASK	VPWLHNLAASK	3	VPWLHNLAASK3		4208.86	
D3ZP13	D3ZP13	D3ZP13_RAT	Qsox2	Sulfhydryl oxidase	1	VPWPTPDLCPVCHEEIK	VPWPTPDLC(UniMod:4)PVC(UniMod:4)HEEIK	3	VPWPTPDLC(UniMod:4)PVC(UniMod:4)HEEIK3	14600.4	10372.9	9939.25
D4A3E2	D4A3E2	D4A3E2_RAT	Npepl1	Aminopeptidase-like 1	1	VPWSHVR	VPWSHVR	2	VPWSHVR2	11732.7	8234.69	12453.4
Q5XI39	A0A8I6A215;Q5XI39	Q5XI39_RAT	Cryzl1	Crystallin zeta like 1	0	VPWTEAAGVIR	VPWTEAAGVIR	2	VPWTEAAGVIR2	33966.7	27521	17268.6
Q6AYT7	Q6AYT7	ABD12_RAT	Abhd12	Lysophosphatidylserine lipase ABHD12	1	VPYFIDLK	VPYFIDLK	2	VPYFIDLK2	22750.6	12178.5	23707.2
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	VPYGLFVGSSGSLDLPYLK	VPYGLFVGSSGSLDLPYLK	3	VPYGLFVGSSGSLDLPYLK3	16758.8	17429.6	9815.56
Q2TGI9	Q2TGI9	Q2TGI9_RAT	Zdhhc21	Palmitoyltransferase	1	VPYHFANHV	VPYHFANHV	2	VPYHFANHV2	6170.36	8385.82	
Q62844	Q62844;Q6P6U0	FYN_RAT	Fyn	Tyrosine-protein kinase Fyn	0	VPYPGMNNR	VPYPGMNNR	2	VPYPGMNNR2	37173.8	27988.7	25396.6
Q9WUD9	Q9WUD9;F1LM93	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	0	VPYPGMVNR	VPYPGMVNR	2	VPYPGMVNR2	300585	230892	265167
P47861	P47861	SYT5_RAT	Syt5	Synaptotagmin-5	1	VPYVELGGR	VPYVELGGR	2	VPYVELGGR2	83840.6	84620.6	80817.7
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	VPYYINHQTQTTCWDHPK	VPYYINHQTQTTC(UniMod:4)WDHPK	3	VPYYINHQTQTTC(UniMod:4)WDHPK3	12566.3	13872.8	7877.07
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	VPYYINHQTQTTCWDHPK	VPYYINHQTQTTC(UniMod:4)WDHPK	4	VPYYINHQTQTTC(UniMod:4)WDHPK4	54103.3	64034.4	42255.1
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	VPYYNIHPMPVHLHQR	VPYYNIHPMPVHLHQR	4	VPYYNIHPMPVHLHQR4	14313.4	8832.47	11425.9
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	VQAAEEELQSCK	VQAAEEELQSC(UniMod:4)K	2	VQAAEEELQSC(UniMod:4)K2	9417.55	7492.89	4166.73
Q5M7A4	Q5M7A4	UBA5_RAT	Uba5	Ubiquitin-like modifier-activating enzyme 5	1	VQAAEHTLR	VQAAEHTLR	2	VQAAEHTLR2	65500	59416.4	55352.7
B2GV94	B2GV94	B2GV94_RAT	Retreg3	Fam134c protein	1	VQAALVWERPAR	VQAALVWERPAR	3	VQAALVWERPAR3	72715.1	84833.8	88752.1
Q5PPK9	Q5PPK9	EIPR1_RAT	Eipr1	EARP and GARP complex-interacting protein 1	1	VQACAAVWR	VQAC(UniMod:4)AAVWR	2	VQAC(UniMod:4)AAVWR2	28644.4	31735.1	20558.8
D3ZQL6	D3ZQL6	MILK1_RAT	Micall1	MICAL-like protein 1	1	VQADQYIPEEDIYGEMDSIER	VQADQYIPEEDIYGEMDSIER	3	VQADQYIPEEDIYGEMDSIER3	18553.1	16653.2	17838.1
A0A8I5XWD7	A0A8I5XWD7;P0C644	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	0	VQAEELGR	VQAEELGR	2	VQAEELGR2	47217.1	49508.5	41044.4
Q5EGY4	Q5EGY4	YKT6_RAT	Ykt6	Synaptobrevin homolog YKT6	1	VQAELDETK	VQAELDETK	2	VQAELDETK2	60999.6	49648.7	75154.4
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	VQAERPDTMLGVVCGALHVADVNLR	VQAERPDTMLGVVC(UniMod:4)GALHVADVNLR	4	VQAERPDTMLGVVC(UniMod:4)GALHVADVNLR4	6825.97	3673.44	
A0A8I5ZVT2	A0A8I5ZVT2	A0A8I5ZVT2_RAT	Fndc3a	Fibronectin type III domain containing 3a	1	VQAESNSIK	VQAESNSIK	2	VQAESNSIK2	9857.16	8869.83	8643.93
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	VQAFGWSLPQK	VQAFGWSLPQK	2	VQAFGWSLPQK2	74733.8	75862.1	71390.8
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	VQAGDVITIDK	VQAGDVITIDK	2	VQAGDVITIDK2	148757	121796	143671
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	VQAGSDLR	VQAGSDLR	2	VQAGSDLR2	16746.1	15787.3	28779.8
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	VQAHAAAALINFTEDCPK	VQAHAAAALINFTEDC(UniMod:4)PK	2	VQAHAAAALINFTEDC(UniMod:4)PK2	2481.22	2280.59	5185.41
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	VQAHAAAALINFTEDCPK	VQAHAAAALINFTEDC(UniMod:4)PK	3	VQAHAAAALINFTEDC(UniMod:4)PK3	167816	215903	164331
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	VQAIAQELLDLTGK	VQAIAQELLDLTGK	2	VQAIAQELLDLTGK2	513220	353370	384767
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	VQAIAQELLDLTGK	VQAIAQELLDLTGK	3	VQAIAQELLDLTGK3	6899.89	5714.1	9484.37
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	VQAILVNIFGGIMR	VQAILVNIFGGIMR	2	VQAILVNIFGGIMR2	9004.42	5630.02	
Q4FZY0	Q4FZY0	EFHD2_RAT	Efhd2	EF-hand domain-containing protein D2	1	VQAINVSSR	VQAINVSSR	2	VQAINVSSR2	148948	151750	142607
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	VQALAEETAQNLK	VQALAEETAQNLK	2	VQALAEETAQNLK2	23591.3	20048	23837.4
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	VQALAEETAQNLKR	VQALAEETAQNLKR	3	VQALAEETAQNLKR3	9253.6		10044.3
Q499T5	Q499T5	Q499T5_RAT	Capn7	Calpain 7	1	VQALHSAVQSK	VQALHSAVQSK	3	VQALHSAVQSK3	5389.59	5425.07	2297.77
P04762	P04762	CATA_RAT	Cat	Catalase	1	VQALLDQYNSQKPK	VQALLDQYNSQKPK	3	VQALLDQYNSQKPK3	21791.8	28270.6	32988.8
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	VQALTTDISLIFAALK	VQALTTDISLIFAALK	3	VQALTTDISLIFAALK3	1116.05		
Q5XIM5	Q5XIM5	CDV3_RAT	Cdv3	Protein CDV3 homolog	1	VQAMQISEKEDDDNEK	VQAMQISEKEDDDNEK	3	VQAMQISEKEDDDNEK3	293746	1.01422e+06	1.25873e+06
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	VQAPPNVVGPR	VQAPPNVVGPR	2	VQAPPNVVGPR2		10420.4	11197.8
O08839	O08839	BIN1_RAT	Bin1	Myc box-dependent-interacting protein 1	1	VQAQHDYTATDTDELQLK	VQAQHDYTATDTDELQLK	3	VQAQHDYTATDTDELQLK3	2313.12	735.666	
F7EZE5	F7EZE5;M0R5M7	F7EZE5_RAT	Btf3	Transcription factor BTF3	0	VQASLAANTFTITGHAETK	VQASLAANTFTITGHAETK	3	VQASLAANTFTITGHAETK3	9465	5367.6	5203.23
D4A3I4	A0A0G2K4W2;D4A3I4	D4A3I4_RAT	Btf3l4	Transcription factor BTF3	0	VQASLSANTFAITGHAEAK	VQASLSANTFAITGHAEAK	3	VQASLSANTFAITGHAEAK3	4408.64		
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VQATDADAGLNR	VQATDADAGLNR	2	VQATDADAGLNR2	44296.8	31133.7	29841.9
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VQATDADAGLNRK	VQATDADAGLNRK	2	VQATDADAGLNRK2	880.325	1671.71	
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VQATDADAGLNRK	VQATDADAGLNRK	3	VQATDADAGLNRK3	110514	100791	85770
D4A415	D4A415	D4A415_RAT	Abraxas2	Abraxas 2, BRISC complex subunit	1	VQAVCADVEK	VQAVC(UniMod:4)ADVEK	2	VQAVC(UniMod:4)ADVEK2	126172	121138	144651
Q05695	Q05695	L1CAM_RAT	L1cam	Neural cell adhesion molecule L1	1	VQAVNNQGK	VQAVNNQGK	2	VQAVNNQGK2			64249.2
D4A249	D4A249	D4A249_RAT	Mblac2	Metallo-beta-lactamase domain containing 2	1	VQAVQPTLILQDGDVINLGDR	VQAVQPTLILQDGDVINLGDR	3	VQAVQPTLILQDGDVINLGDR3		4230.93	
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	VQAVVAVAR	VQAVVAVAR	2	VQAVVAVAR2	1.09893e+06	1.18013e+06	106069
Q9WVC0	Q9WVC0	SEPT7_RAT	Septin7	Septin-7	1	VQCCLYFIAPSGHGLKPLDIEFMK	VQC(UniMod:4)C(UniMod:4)LYFIAPSGHGLKPLDIEFMK	3	VQC(UniMod:4)C(UniMod:4)LYFIAPSGHGLKPLDIEFMK3	6820.08	9972.71	
Q9WVC0	Q9WVC0	SEPT7_RAT	Septin7	Septin-7	1	VQCCLYFIAPSGHGLKPLDIEFMK	VQC(UniMod:4)C(UniMod:4)LYFIAPSGHGLKPLDIEFMK	4	VQC(UniMod:4)C(UniMod:4)LYFIAPSGHGLKPLDIEFMK4	85205.2	60246.7	67528.8
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	VQCDGGILK	VQC(UniMod:4)DGGILK	2	VQC(UniMod:4)DGGILK2	108984	101884	105834
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	VQCHSGYSLPNGQDTILCTENGWSPPPK	VQC(UniMod:4)HSGYSLPNGQDTILC(UniMod:4)TENGWSPPPK	4	VQC(UniMod:4)HSGYSLPNGQDTILC(UniMod:4)TENGWSPPPK4	11793.5	13905.5	6046.31
Q5FVC7	Q5FVC7	ACAP2_RAT	Acap2	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2	1	VQCIPGNTSCCDCGLADPR	VQC(UniMod:4)IPGNTSC(UniMod:4)C(UniMod:4)DC(UniMod:4)GLADPR	3	VQC(UniMod:4)IPGNTSC(UniMod:4)C(UniMod:4)DC(UniMod:4)GLADPR3	4212.8		
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	VQCLVVDR	VQC(UniMod:4)LVVDR	2	VQC(UniMod:4)LVVDR2	28858.7	28118.5	28222.7
A0A8I6AAJ7	A0A8I6AAJ7	A0A8I6AAJ7_RAT	Chml	Rab proteins geranylgeranyltransferase component A	1	VQCLVVDRDSGR	VQC(UniMod:4)LVVDRDSGR	3	VQC(UniMod:4)LVVDRDSGR3	6491.95	4730.52	
F1LTR1	F1LTR1	WDR26_RAT	Wdr26	WD repeat-containing protein 26	1	VQCLWCLSDGK	VQC(UniMod:4)LWC(UniMod:4)LSDGK	2	VQC(UniMod:4)LWC(UniMod:4)LSDGK2	12053.2	17306.5	19431.3
Q63515	Q63515	C4BPB_RAT	C4bpb	C4b-binding protein beta chain	1	VQCSDGEWSPSYPTCESIQEPPK	VQC(UniMod:4)SDGEWSPSYPTC(UniMod:4)ESIQEPPK	3	VQC(UniMod:4)SDGEWSPSYPTC(UniMod:4)ESIQEPPK3	235354	236308	213524
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	VQDAVQQHQQK	VQDAVQQHQQK	2	VQDAVQQHQQK2			11158.3
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	VQDAVQQHQQK	VQDAVQQHQQK	3	VQDAVQQHQQK3			47491.8
P21213	P21213	HUTH_RAT	Hal	Histidine ammonia-lyase	1	VQDAYTLR	VQDAYTLR	2	VQDAYTLR2	12826.4	7527.31	11000.5
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	VQDDEVGDGTTSVTVLAAELLR	VQDDEVGDGTTSVTVLAAELLR	3	VQDDEVGDGTTSVTVLAAELLR3	29337.1	30847.1	35423.8
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	VQDENEHAPAFAR	VQDENEHAPAFAR	3	VQDENEHAPAFAR3	9643.63	13869.2	5722.23
Q02563	Q02563	SV2A_RAT	Sv2a	Synaptic vesicle glycoprotein 2A	1	VQDEYSR	VQDEYSR	2	VQDEYSR2	18414		17914.6
D3ZTA9	A0A8I5ZUU3;D3ZGJ6;D3ZTA9;D3ZFR1	D3ZTA9_RAT	Hs3st3b1	Sulfotransferase	0	VQDFLGLK	VQDFLGLK	2	VQDFLGLK2	31430	77939	
A0A0G2K6T9	A0A0G2K6T9	A0A0G2K6T9_RAT	Pcdh1	Protocadherin 1	1	VQDGGSPPR	VQDGGSPPR	2	VQDGGSPPR2			35040.3
A0A8I5YCH6	A0A8I5YCH6	A0A8I5YCH6_RAT	Aaas	Aladin WD repeat nucleoporin	1	VQDGNPVILLFR	VQDGNPVILLFR	2	VQDGNPVILLFR2			5330.38
A0A8I6GK77	A0A8I6GK77	A0A8I6GK77_RAT	Bcas3	BCAS3, microtubule associated cell migration factor	1	VQDICFSHDCR	VQDIC(UniMod:4)FSHDC(UniMod:4)R	3	VQDIC(UniMod:4)FSHDC(UniMod:4)R3	6954.69	9852.53	10549.3
F1MAH6	F1MAH6	F1MAH6_RAT	Cdh11	Cadherin 11	1	VQDINDNPPEFLHETYHANVPER	VQDINDNPPEFLHETYHANVPER	4	VQDINDNPPEFLHETYHANVPER4	11691.5		14827.9
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	VQDIPTGADSCVTSLSCDSHR	VQDIPTGADSC(UniMod:4)VTSLSC(UniMod:4)DSHR	3	VQDIPTGADSC(UniMod:4)VTSLSC(UniMod:4)DSHR3	56156.1	53590.1	33989.2
D4A8L5	D4A8L5	D4A8L5_RAT	Mocs3	Adenylyltransferase and sulfurtransferase MOCS3	1	VQDISGGLMAWAAK	VQDISGGLMAWAAK	2	VQDISGGLMAWAAK2	5530.87		6559.91
F7EKI5	F7EKI5	F7EKI5_RAT	Pcdh18	Protocadherin 18	1	VQDKDSGLNGEIICK	VQDKDSGLNGEIIC(UniMod:4)K	3	VQDKDSGLNGEIIC(UniMod:4)K3	19985.3	9390.7	12685.4
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	VQDKPESPSGSTQIQR	VQDKPESPSGSTQIQR	2	VQDKPESPSGSTQIQR2	1292.21	3618.89	1589.14
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	VQDKPESPSGSTQIQR	VQDKPESPSGSTQIQR	3	VQDKPESPSGSTQIQR3	41709.6	46398.5	55346
Q5PQS4	Q5PQS4	GULP1_RAT	Gulp1	PTB domain-containing engulfment adapter protein 1	1	VQDLENR	VQDLENR	2	VQDLENR2		18992.6	29107.5
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	VQDLTALLSSK	VQDLTALLSSK	2	VQDLTALLSSK2	13419	24624.4	26579.6
P37727	P37727	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	1	VQDNTETPK	VQDNTETPK	2	VQDNTETPK2			6452.13
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	VQDQGQTLQVTGLR	VQDQGQTLQVTGLR	2	VQDQGQTLQVTGLR2	16872.5	15867.8	19242.9
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	VQDQGQTLQVTGLR	VQDQGQTLQVTGLR	3	VQDQGQTLQVTGLR3	8026.52	7601.92	9875.65
A0A0G2JVY4	A0A0G2JVY4	A0A0G2JVY4_RAT	Tmem63a	Transmembrane protein 63a	1	VQDQPLGMAFVTFR	VQDQPLGMAFVTFR	2	VQDQPLGMAFVTFR2	14120.2	9544.72	8813.64
F1LYX9	F1LYX9	F1LYX9_RAT	Dsg2	Desmoglein 2	1	VQDTDNWVSVDSETSEIK	VQDTDNWVSVDSETSEIK	3	VQDTDNWVSVDSETSEIK3	14689.1	11772.5	7767.09
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	VQDVCAQGEDILSK	VQDVC(UniMod:4)AQGEDILSK	2	VQDVC(UniMod:4)AQGEDILSK2	13031.8	12987	12911.2
B2GV97	B2GV97	B2GV97_RAT	Sepsecs	O-phosphoseryl-tRNA(Sec) selenium transferase	1	VQDVDLFIK	VQDVDLFIK	2	VQDVDLFIK2	11650	2776.31	11105.1
A1L1K3	A1L1K3	APC5_RAT	Anapc5	Anaphase-promoting complex subunit 5	1	VQDVFSSTHSLLHYFDR	VQDVFSSTHSLLHYFDR	4	VQDVFSSTHSLLHYFDR4	9568.56	6876.71	10765.9
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	VQDVVPQALLDQYLSMTDPSR	VQDVVPQALLDQYLSMTDPSR	3	VQDVVPQALLDQYLSMTDPSR3	4269.22	5736.49	8263.92
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	VQDVVTK	VQDVVTK	2	VQDVVTK2	9178.03		13100.7
Q63488	Q63488	S20A2_RAT	Slc20a2	Sodium-dependent phosphate transporter 2	1	VQEAESPVFK	VQEAESPVFK	2	VQEAESPVFK2	22842.3	26907.4	22025.6
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	VQEANIHQFMAQFHEK	VQEANIHQFMAQFHEK	4	VQEANIHQFMAQFHEK4	6560.56		4543.07
B0BN94	B0BN94	F136A_RAT	Fam136a	Protein FAM136A	1	VQEAVDAMVK	VQEAVDAMVK	2	VQEAVDAMVK2	11378.4	16321.5	9250.6
Q63060	Q63060	GLPK_RAT	Gk	Glycerol kinase	1	VQEAVEENR	VQEAVEENR	2	VQEAVEENR2	48757	47703.6	57673.9
Q9ERE4	Q9ERE4	GOLP3_RAT	Golph3	Golgi phosphoprotein 3	1	VQEAVLDK	VQEAVLDK	2	VQEAVLDK2	25221.7	13312.8	22936.9
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	VQECPPDGR	VQEC(UniMod:4)PPDGR	2	VQEC(UniMod:4)PPDGR2	351091	593509	379316
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	VQEDEFR	VQEDEFR	2	VQEDEFR2	19674.6	15868.3	14654.5
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	VQEEEHDLVDDDITTGCLSSVPQMK	VQEEEHDLVDDDITTGC(UniMod:4)LSSVPQMK	3	VQEEEHDLVDDDITTGC(UniMod:4)LSSVPQMK3	20052.1	15681	19020.4
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	VQEEEMELVK	VQEEEMELVK	2	VQEEEMELVK2	14637.1	12614.2	8852.59
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	VQEERDPGNEQGPIHGHGWLHAK	VQEERDPGNEQGPIHGHGWLHAK	3	VQEERDPGNEQGPIHGHGWLHAK3	189010	136482	69499.4
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	VQEERDPGNEQGPIHGHGWLHAK	VQEERDPGNEQGPIHGHGWLHAK	4	VQEERDPGNEQGPIHGHGWLHAK4	1.17249e+06	972222	804215
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	VQEFNNCLNR	VQEFNNC(UniMod:4)LNR	2	VQEFNNC(UniMod:4)LNR2	12375.3	10081.9	19395.1
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	VQEGYTCDCFDGYHLDMAK	VQEGYTC(UniMod:4)DC(UniMod:4)FDGYHLDMAK	3	VQEGYTC(UniMod:4)DC(UniMod:4)FDGYHLDMAK3	91077.2	117324	105534
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	VQEIITWLK	VQEIITWLK	2	VQEIITWLK2	4471.57	4094.79	4000.31
Q3MHS7	Q3MHS7	Q3MHS7_RAT	Gmds	GDP-mannose 4,6-dehydratase	1	VQEIPQK	VQEIPQK	2	VQEIPQK2	31610.8	28264	30131.9
Q642G4	Q642G4	PEX14_RAT	Pex14	Peroxisomal membrane protein PEX14	1	VQELAHELAAAK	VQELAHELAAAK	3	VQELAHELAAAK3	15922.2	18096.4	18027.7
Q66HR5	Q66HR5	CACO1_RAT	Calcoco1	Calcium-binding and coiled-coil domain-containing protein 1	1	VQELEAALATAR	VQELEAALATAR	2	VQELEAALATAR2	31798.3	21873	32722.3
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	VQELEGLDVEYR	VQELEGLDVEYR	2	VQELEGLDVEYR2	159081	161626	160097
G3V7P2	G3V7P2	G3V7P2_RAT	Fgl2	Fibrinogen-like 2	1	VQELESQVNK	VQELESQVNK	2	VQELESQVNK2	1.1662e+06	1.09965e+06	883265
Q9EPY0	Q9EPY0	CARD9_RAT	Card9	Caspase recruitment domain-containing protein 9	1	VQELEVSVQEGK	VQELEVSVQEGK	2	VQELEVSVQEGK2	16740.1	21506.9	22074.1
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	VQELGHGCSALVTK	VQELGHGC(UniMod:4)SALVTK	2	VQELGHGC(UniMod:4)SALVTK2	94360.7	85486.4	77883.8
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	VQELGHGCSALVTK	VQELGHGC(UniMod:4)SALVTK	3	VQELGHGC(UniMod:4)SALVTK3	2.27346e+06	2.25732e+06	2.29559e+06
E9PU29	E9PU29	E9PU29_RAT	Rnf31	RBR-type E3 ubiquitin transferase	1	VQELQSLGFEPK	VQELQSLGFEPK	2	VQELQSLGFEPK2	10993.3	10880.4	16349.1
A0A0G2K098	A0A0G2K098	A0A0G2K098_RAT	Mcc	MCC regulator of WNT signaling pathway	1	VQELVSALER	VQELVSALER	2	VQELVSALER2	8008.46	9242.81	8451.23
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	VQEMIIHDQYTSAESGFDIALLK	VQEMIIHDQYTSAESGFDIALLK	3	VQEMIIHDQYTSAESGFDIALLK3	4951.13		6021.48
O35547	O35547	ACSL4_RAT	Acsl4	Long-chain-fatty-acid--CoA ligase 4	1	VQEMNYIQK	VQEMNYIQK	2	VQEMNYIQK2	16608	17601.4	13505.4
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	VQEMVDSNEAK	VQEMVDSNEAK	2	VQEMVDSNEAK2	71619.1	101042	63212.4
Q80VJ4	Q80VJ4	GPCP1_RAT	Gpcpd1	Glycerophosphocholine phosphodiesterase GPCPD1	1	VQENTIASLR	VQENTIASLR	2	VQENTIASLR2	24024.6	35756.9	25244
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	VQEPETK	VQEPETK	1	VQEPETK1			3993.62
A0A8I5ZY32	A0A8I5ZY32	A0A8I5ZY32_RAT	Ehbp1l1	EH domain binding protein 1-like 1	1	VQEPETK	VQEPETK	2	VQEPETK2			20764.7
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	VQEPTLGEDGSSAFFSER	VQEPTLGEDGSSAFFSER	2	VQEPTLGEDGSSAFFSER2	9455.34	9518.7	10035.5
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	VQEQELK	VQEQELK	2	VQEQELK2	101155	92605.6	194827
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	VQEQELTR	VQEQELTR	2	VQEQELTR2	18457.9	16595.2	16003.1
P84083	P84083	ARF5_RAT	Arf5	ADP-ribosylation factor 5	1	VQESADELQK	VQESADELQK	2	VQESADELQK2	55536.3	62189	64619.1
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	VQESLAK	VQESLAK	2	VQESLAK2	115561	131272	130183
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	VQETRPGDLGK	VQETRPGDLGK	3	VQETRPGDLGK3	108646	70682	122804
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	VQEVALGQR	VQEVALGQR	2	VQEVALGQR2	8018.38	5862.41	10345.1
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	VQEVEVPEDFGPVR	VQEVEVPEDFGPVR	2	VQEVEVPEDFGPVR2	82392.8	75601.4	112213
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	VQEVEVPEDFGPVR	VQEVEVPEDFGPVR	3	VQEVEVPEDFGPVR3	11216.8	12087.4	10093
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	VQEVLLK	VQEVLLK	2	VQEVLLK2	1.02155e+06	1.09986e+06	987068
Q9WTT7	Q9WTT7	5MP1_RAT	Bzw2	eIF5-mimic protein 1	1	VQEYCYDNIHFMK	VQEYC(UniMod:4)YDNIHFMK	3	VQEYC(UniMod:4)YDNIHFMK3	5692.61	2489.14	3609.64
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	VQFAPETPGPQPSAETTR	VQFAPETPGPQPSAETTR	2	VQFAPETPGPQPSAETTR2	63762.9	54048	65498.3
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	VQFAPETPGPQPSAETTR	VQFAPETPGPQPSAETTR	3	VQFAPETPGPQPSAETTR3	62532.4	54186.3	45421.1
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	VQFELHYQEVK	VQFELHYQEVK	2	VQFELHYQEVK2	129198	147319	5.88458e+06
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	VQFELHYQEVK	VQFELHYQEVK	3	VQFELHYQEVK3	2.94444e+06	3.44911e+06	2.45689e+06
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	VQFELHYQEVKWR	VQFELHYQEVKWR	3	VQFELHYQEVKWR3	26208	35148.9	29367.9
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	VQFELHYQEVKWR	VQFELHYQEVKWR	4	VQFELHYQEVKWR4	28178.9	23030.9	33576.9
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	VQFELHYQEVKWRK	VQFELHYQEVKWRK	4	VQFELHYQEVKWRK4	18076.9	14013.5	22290.9
Q5PPL3	Q5PPL3	NSDHL_RAT	Nsdhl	Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating	1	VQFFIGDLCNQQDLYPALK	VQFFIGDLC(UniMod:4)NQQDLYPALK	3	VQFFIGDLC(UniMod:4)NQQDLYPALK3	9362.91	13733	8235.76
B2GV55	B2GV55;A0A8I6AE35	B2GV55_RAT	Ube2q1	Ubiquitin conjugating enzyme E2 Q1	0	VQFGANK	VQFGANK	2	VQFGANK2	69942.4	50483.3	56017.9
P12928	P12928	KPYR_RAT	Pklr	Pyruvate kinase PKLR	1	VQFGIESGK	VQFGIESGK	2	VQFGIESGK2	8672.66		
Q6AYT7	Q6AYT7	ABD12_RAT	Abhd12	Lysophosphatidylserine lipase ABHD12	1	VQFIPFHSDLGYR	VQFIPFHSDLGYR	3	VQFIPFHSDLGYR3	49265.1	47131.5	47056.3
P97535	P97535	PLA1A_RAT	Pla1a	Phospholipase A1 member A	1	VQFLLFTPSDPGCGQLVEEDSDIR	VQFLLFTPSDPGC(UniMod:4)GQLVEEDSDIR	3	VQFLLFTPSDPGC(UniMod:4)GQLVEEDSDIR3	19812.7	36760.1	32485.4
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	VQFMYGEDPSNAMPVIFGK	VQFMYGEDPSNAMPVIFGK	3	VQFMYGEDPSNAMPVIFGK3	13152.4	25292.7	19503.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VQFPGNAGTYTVDELYTIAMR	VQFPGNAGTYTVDELYTIAMR	3	VQFPGNAGTYTVDELYTIAMR3	34597.7	40867.5	46916.6
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	VQFTDAGNLEPETSLDPR	VQFTDAGNLEPETSLDPR	3	VQFTDAGNLEPETSLDPR3	5884.23		7780.76
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	VQFVCNEGYELVGDNSWTCQK	VQFVC(UniMod:4)NEGYELVGDNSWTC(UniMod:4)QK	3	VQFVC(UniMod:4)NEGYELVGDNSWTC(UniMod:4)QK3	11773.7	9167.88	8080.41
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	VQGDYFETLLYK	VQGDYFETLLYK	2	VQGDYFETLLYK2	5670.58	3962.11	11947.6
A0A8J8YPH6	A0A8J8YPH6	A0A8J8YPH6_RAT	Hps4	HPS4, biogenesis of lysosomal organelles complex 3 subunit 2	1	VQGEGDPTR	VQGEGDPTR	2	VQGEGDPTR2			48766.4
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	VQGGALEESR	VQGGALEESR	2	VQGGALEESR2	321999	392222	348071
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	VQGHDYEAGGSVIHPLNLHMK	VQGHDYEAGGSVIHPLNLHMK	3	VQGHDYEAGGSVIHPLNLHMK3	4972.43		
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	VQGHDYEAGGSVIHPLNLHMK	VQGHDYEAGGSVIHPLNLHMK	4	VQGHDYEAGGSVIHPLNLHMK4	11805.1	24367.9	12331.9
A0A8I5ZU99	A0A8I5ZU99	A0A8I5ZU99_RAT	Ppm1l	Protein phosphatase, Mg2+/Mn2+ dependent, 1L	1	VQGILAMSR	VQGILAMSR	2	VQGILAMSR2	23153.6	9436.29	16025.9
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	VQGISVSNSAR	VQGISVSNSAR	2	VQGISVSNSAR2	28142.3	21201.1	18312.3
Q5XID1	Q5XID1	CPIN1_RAT	Ciapin1	Anamorsin	1	VQGLTGSEGQVFVENITQLLQSAHK	VQGLTGSEGQVFVENITQLLQSAHK	3	VQGLTGSEGQVFVENITQLLQSAHK3	8396.8	4511.94	7860.79
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VQGLTVEQAEAVAR	VQGLTVEQAEAVAR	2	VQGLTVEQAEAVAR2	208493	278560	210235
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VQGLTVEQAEAVAR	VQGLTVEQAEAVAR	3	VQGLTVEQAEAVAR3	9335.53	15243.5	14856.5
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	VQGSDSDEEVVVATTR	VQGSDSDEEVVVATTR	2	VQGSDSDEEVVVATTR2	15596	20410	14012
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	VQGSDSDEEVVVATTR	VQGSDSDEEVVVATTR	3	VQGSDSDEEVVVATTR3	7120.42	7449.25	6972
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	VQGTGVTPPPTPSGTR	VQGTGVTPPPTPSGTR	2	VQGTGVTPPPTPSGTR2	18518.6	24288.4	21498.9
D3Z7Z5	D3Z7Z5	D3Z7Z5_RAT	Ranbp10	RAN binding protein 10	1	VQGTVHGFPISAR	VQGTVHGFPISAR	3	VQGTVHGFPISAR3	13753.5	15830.2	9054.27
Q68FT3	Q68FT3	PYRD2_RAT	Pyroxd2	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2	1	VQGVVLQGGEEVR	VQGVVLQGGEEVR	2	VQGVVLQGGEEVR2	16067.5	22232.1	32248.1
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	VQHCVCSVASDHSVGLLSLR	VQHC(UniMod:4)VC(UniMod:4)SVASDHSVGLLSLR	4	VQHC(UniMod:4)VC(UniMod:4)SVASDHSVGLLSLR4	9756.76	12983.9	5038.24
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	VQHDVFR	VQHDVFR	2	VQHDVFR2	18538.1	16483.4	16287.2
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	VQHLHSSGCYQELLAR	VQHLHSSGC(UniMod:4)YQELLAR	3	VQHLHSSGC(UniMod:4)YQELLAR3	3769.33		4102.21
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	VQHLHSSGCYQELLAR	VQHLHSSGC(UniMod:4)YQELLAR	4	VQHLHSSGC(UniMod:4)YQELLAR4	11729.4	8279.94	9853.93
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	VQHQDALQISDVVMASLLR	VQHQDALQISDVVMASLLR	3	VQHQDALQISDVVMASLLR3	63512.8	62132	82627.7
D3Z9L0	D3Z9L0	D3Z9L0_RAT	Agk	Acylglycerol kinase, mitochondrial	1	VQHVTDAALAIVK	VQHVTDAALAIVK	2	VQHVTDAALAIVK2	11808.9	3214.95	5173.87
D3Z9L0	D3Z9L0	D3Z9L0_RAT	Agk	Acylglycerol kinase, mitochondrial	1	VQHVTDAALAIVK	VQHVTDAALAIVK	3	VQHVTDAALAIVK3	14651.3	31191.3	22572.5
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	VQIAEAINLQDK	VQIAEAINLQDK	2	VQIAEAINLQDK2	42091.4	47540.4	47061.2
P62076	P62076	TIM13_RAT	Timm13	Mitochondrial import inner membrane translocase subunit Tim13	1	VQIAVANAQELLQR	VQIAVANAQELLQR	2	VQIAVANAQELLQR2	33394.4	22901.6	27056.5
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	VQIEHISSLIK	VQIEHISSLIK	2	VQIEHISSLIK2	20323.7	18820.8	18377.8
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	VQIEHISSLIK	VQIEHISSLIK	3	VQIEHISSLIK3	171690	241802	189447
D3ZBE5	D3ZBE5	NEK7_RAT	Nek7	Serine/threonine-protein kinase Nek7	1	VQIFDLMDAK	VQIFDLMDAK	2	VQIFDLMDAK2		4806.3	2391.03
M0RBL7	M0RBL7	M0RBL7_RAT	Tcaf2c	Protein FAM115C-like	1	VQIGCHTDNLSHAR	VQIGC(UniMod:4)HTDNLSHAR	4	VQIGC(UniMod:4)HTDNLSHAR4	6251.72		
Q62639	Q62639	RHEB_RAT	Rheb	GTP-binding protein Rheb	1	VQIPIMLVGNK	VQIPIMLVGNK	2	VQIPIMLVGNK2	93242.4	141583	159031
Q62639	Q62639	RHEB_RAT	Rheb	GTP-binding protein Rheb	1	VQIPIMLVGNKK	VQIPIMLVGNKK	3	VQIPIMLVGNKK3	42107.9	51174.5	61447.8
Q5M849	Q5M849	Q5M849_RAT	Ifi35	Interferon-induced protein 35	1	VQIQPLELPMVTNIQVSSQPDSHR	VQIQPLELPMVTNIQVSSQPDSHR	3	VQIQPLELPMVTNIQVSSQPDSHR3	27731.6	39185.8	24066.4
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	VQIQSNR	VQIQSNR	2	VQIQSNR2	106037	114172	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	VQIQSNRENLEQAFEVAER	VQIQSNRENLEQAFEVAER	3	VQIQSNRENLEQAFEVAER3	5607.18		2481.51
B5DEI0	B5DEI0	B5DEI0_RAT	Pcyox1l	Pcyox1l protein	1	VQIVVYEK	VQIVVYEK	2	VQIVVYEK2	60729.6	56434.2	61005.3
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	VQIYHNPTANSFR	VQIYHNPTANSFR	2	VQIYHNPTANSFR2	30652.8	22475.3	31290.7
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	VQIYHNPTANSFR	VQIYHNPTANSFR	3	VQIYHNPTANSFR3	153466	159292	146272
Q11205	Q11205	SIA4B_RAT	St3gal2	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2	1	VQIYNPAFFK	VQIYNPAFFK	2	VQIYNPAFFK2	22953.7	25472.1	20897.5
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	VQLATSIGNPPVSLLQQCTNILSQGSK	VQLATSIGNPPVSLLQQC(UniMod:4)TNILSQGSK	3	VQLATSIGNPPVSLLQQC(UniMod:4)TNILSQGSK3	24572.1	20620.4	19599.7
B2ZDP9	B2ZDP9	B2ZDP9_RAT	Orai2	Calcium release-activated calcium modulator 2 protein	1	VQLDGHER	VQLDGHER	2	VQLDGHER2	27482.5	26332.3	
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	VQLDLAEIDLSQGAAQWYDLIDDRDK	VQLDLAEIDLSQGAAQWYDLIDDRDK	4	VQLDLAEIDLSQGAAQWYDLIDDRDK4	10739.7	13564.2	
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	VQLEHLEFLEK	VQLEHLEFLEK	3	VQLEHLEFLEK3	4772.59	3475.53	9522.59
B0BNL6	B0BNL6	ARRD1_RAT	Arrdc1	Arrestin domain-containing protein 1	1	VQLFEIR	VQLFEIR	2	VQLFEIR2	9734.32	20327.4	12765.2
Q5U2R3	Q5U2R3	FRMD8_RAT	Frmd8	FERM domain-containing protein 8	1	VQLGPYQPGQPAACTVR	VQLGPYQPGQPAAC(UniMod:4)TVR	2	VQLGPYQPGQPAAC(UniMod:4)TVR2	12154.5	9335.9	11249.2
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	VQLHVLR	VQLHVLR	2	VQLHVLR2	11270.2	7756.33	5636.47
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	VQLIEDR	VQLIEDR	2	VQLIEDR2	135837	200388	169672
Q9R063	Q9R063	PRDX5_RAT	Prdx5	Peroxiredoxin-5, mitochondrial	1	VQLLADPTGAFGK	VQLLADPTGAFGK	2	VQLLADPTGAFGK2	414349	346204	477556
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	VQLLATWQELCQR	VQLLATWQELC(UniMod:4)QR	2	VQLLATWQELC(UniMod:4)QR2	4453.16	5189.29	
Q29RW1	Q29RW1	MYH4_RAT	Myh4	Myosin-4	1	VQLLHTQNTSLINTK	VQLLHTQNTSLINTK	3	VQLLHTQNTSLINTK3	4989.05	3494.65	1691.06
D4A208	D4A208;F1M287	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	0	VQLLQDLQDFFR	VQLLQDLQDFFR	2	VQLLQDLQDFFR2	8628.24	9804.12	9026.77
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	VQLMVTDSELSDQFSIDTVGSHGAIK	VQLMVTDSELSDQFSIDTVGSHGAIK	3	VQLMVTDSELSDQFSIDTVGSHGAIK3	1988.21	9874.77	6384.29
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	VQLNVFDEQGDEDFFDLK	VQLNVFDEQGDEDFFDLK	3	VQLNVFDEQGDEDFFDLK3			1591.05
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	VQLNVFDEQGDEDFFDLKGR	VQLNVFDEQGDEDFFDLKGR	3	VQLNVFDEQGDEDFFDLKGR3	4704.72	9508.18	8914.88
A0A8I5ZS17	A0A8I5ZS17	A0A8I5ZS17_RAT	Snx25	Sorting nexin 25	1	VQLPSLSK	VQLPSLSK	2	VQLPSLSK2	7533.29		
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	VQLQEAER	VQLQEAER	2	VQLQEAER2	27125.4	20095.9	30429.6
F1LW91	F1LW91	F1LW91_RAT	Numa1	Nuclear mitotic apparatus protein 1	1	VQLQEQLQALEETLK	VQLQEQLQALEETLK	2	VQLQEQLQALEETLK2	3177.47	244.44	246.446
Q68FW9	Q68FW9	CSN3_RAT	Cops3	COP9 signalosome complex subunit 3	1	VQLSGPQEAEK	VQLSGPQEAEK	2	VQLSGPQEAEK2	360135	381178	317954
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	VQLSSPGQLFTALER	VQLSSPGQLFTALER	2	VQLSSPGQLFTALER2	36236.2	33071.9	37563.5
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	VQLTPGQTEVK	VQLTPGQTEVK	2	VQLTPGQTEVK2	55360.8	59922.9	57648.5
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	VQLTTCIHHIIK	VQLTTC(UniMod:4)IHHIIK	3	VQLTTC(UniMod:4)IHHIIK3	26198.4	4420.17	
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	VQLTYLPHGCPK	VQLTYLPHGC(UniMod:4)PK	3	VQLTYLPHGC(UniMod:4)PK3	21278.5	26829.9	23919.8
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	VQLVDSVYCIGQR	VQLVDSVYC(UniMod:4)IGQR	2	VQLVDSVYC(UniMod:4)IGQR2	110967	128296	107319
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	VQLVDSVYCIGQR	VQLVDSVYC(UniMod:4)IGQR	3	VQLVDSVYC(UniMod:4)IGQR3	40820.5	37716.5	38512.9
B2RZ68	B2RZ68	B2RZ68_RAT	Dcaf7	DDB1 and CUL4 associated factor 7	1	VQLVGLDEESSEFICR	VQLVGLDEESSEFIC(UniMod:4)R	2	VQLVGLDEESSEFIC(UniMod:4)R2	13808.6	13115	12151
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	VQLYFMHFNLESSYLCEYDYVK	VQLYFMHFNLESSYLC(UniMod:4)EYDYVK	3	VQLYFMHFNLESSYLC(UniMod:4)EYDYVK3	9283.56		13005.9
P84850	P84850	D2HDH_RAT	D2hgdh	D-2-hydroxyglutarate dehydrogenase, mitochondrial	1	VQMLWALR	VQMLWALR	2	VQMLWALR2	11896.5	4729.01	10313.9
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	VQMQEDDIQLLK	VQMQEDDIQLLK	2	VQMQEDDIQLLK2	180336	183583	217376
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	VQMQEDDIQLLK	VQMQEDDIQLLK	3	VQMQEDDIQLLK3	2495.97	1968.56	
Q5FVJ6	Q5FVJ6	BSCL2_RAT	Bscl2	Seipin	1	VQMYGAYLR	VQMYGAYLR	2	VQMYGAYLR2	6542.14	4256.84	3993.57
A0A0G2K3K5	A0A0G2K3K5	A0A0G2K3K5_RAT	B4galt5	Beta-1,4-galactosyltransferase	1	VQNAGYSVSRPEGDTGK	VQNAGYSVSRPEGDTGK	3	VQNAGYSVSRPEGDTGK3	25465.9	31490.3	33485.5
A0A8I5ZV26	A0A8I5ZV26	A0A8I5ZV26_RAT	Stom	Stomatin	1	VQNATLAVANITNADSATR	VQNATLAVANITNADSATR	2	VQNATLAVANITNADSATR2	216721	159361	186064
A0A8I5ZV26	A0A8I5ZV26	A0A8I5ZV26_RAT	Stom	Stomatin	1	VQNATLAVANITNADSATR	VQNATLAVANITNADSATR	3	VQNATLAVANITNADSATR3	525624	520164	618614
Q5XFW6	Q5XFW6	WDR6_RAT	Wdr6	WD repeat-containing protein 6	1	VQNLLGHYLIHGFR	VQNLLGHYLIHGFR	4	VQNLLGHYLIHGFR4	3481.05	4837.58	6822.29
Q07984	Q07984	SSRD_RAT	Ssr4	Translocon-associated protein subunit delta	1	VQNMALYADVSGK	VQNMALYADVSGK	2	VQNMALYADVSGK2	98517.9	88553.3	85373.1
Q07984	Q07984	SSRD_RAT	Ssr4	Translocon-associated protein subunit delta	1	VQNMALYADVSGK	VQNMALYADVSGK	3	VQNMALYADVSGK3		5940.49	4451.6
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	VQNMVNSGR	VQNMVNSGR	2	VQNMVNSGR2	36540.1	47694.9	49185.5
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	VQNVEDFVPEDGLDR	VQNVEDFVPEDGLDR	2	VQNVEDFVPEDGLDR2	33746.1	22667.3	21114.2
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	VQNVEDFVPEDGLDR	VQNVEDFVPEDGLDR	3	VQNVEDFVPEDGLDR3	15970.3	8869.49	7540.47
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	VQPASGENGGDAR	VQPASGENGGDAR	2	VQPASGENGGDAR2			11502.5
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	VQPAVMQR	VQPAVMQR	2	VQPAVMQR2	73743	78765.3	74631
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	VQPDAISR	VQPDAISR	2	VQPDAISR2	33588.7	37603.9	
P47861	P47861	SYT5_RAT	Syt5	Synaptotagmin-5	1	VQPEIEELDPSPSMPGQQVLDK	VQPEIEELDPSPSMPGQQVLDK	3	VQPEIEELDPSPSMPGQQVLDK3	31341.9	31657.6	36910.6
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	VQPGCYLPSNPEAIVLDIDYK	VQPGC(UniMod:4)YLPSNPEAIVLDIDYK	3	VQPGC(UniMod:4)YLPSNPEAIVLDIDYK3	1467.46	10959.5	4840.5
D4A2Z8	D4A2Z8	DHX36_RAT	Dhx36	ATP-dependent DNA/RNA helicase DHX36	1	VQPGHCYHLYNGLR	VQPGHC(UniMod:4)YHLYNGLR	4	VQPGHC(UniMod:4)YHLYNGLR4	5986		
D3ZS97	D3ZS97	D3ZS97_RAT	Cd226	CD226 molecule	1	VQPHQVDILASCNLSQGTR	VQPHQVDILASC(UniMod:4)NLSQGTR	3	VQPHQVDILASC(UniMod:4)NLSQGTR3	116042	100104	130869
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	VQPIPELSELSR	VQPIPELSELSR	2	VQPIPELSELSR2	10041.7	26097.1	19858.4
P15650	P15650	ACADL_RAT	Acadl	Long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	VQPIYGGTNEIMK	VQPIYGGTNEIMK	2	VQPIYGGTNEIMK2	202572	198573	204653
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	VQPNEAVYTK	VQPNEAVYTK	2	VQPNEAVYTK2	352469	286789	334722
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	VQPPSEVTQR	VQPPSEVTQR	2	VQPPSEVTQR2	208844	181586	202834
P25304	P25304	AGRIN_RAT	Agrn	Agrin	1	VQPPSMPAFK	VQPPSMPAFK	2	VQPPSMPAFK2	19651.1	28319	30136.6
Q08420	Q08420	SODE_RAT	Sod3	Extracellular superoxide dismutase [Cu-Zn]	1	VQPSAMLPPDQPQITGLVLFR	VQPSAMLPPDQPQITGLVLFR	3	VQPSAMLPPDQPQITGLVLFR3	84249.7	67331.7	99833.4
G3V762	G3V762	G3V762_RAT	Gfus	GDP-L-fucose synthase	1	VQPTHVIHLAAMVGGLFR	VQPTHVIHLAAMVGGLFR	4	VQPTHVIHLAAMVGGLFR4	8903.13	8075.53	7189.1
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	VQPYLPELMECMLQPLKNPSK	VQPYLPELMEC(UniMod:4)MLQPLKNPSK	3	VQPYLPELMEC(UniMod:4)MLQPLKNPSK3	12066.4	13888.1	13741.4
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	VQQAAVLR	VQQAAVLR	2	VQQAAVLR2	117246	106858	103939
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	VQQAELHTGSLPQIQSTALR	VQQAELHTGSLPQIQSTALR	3	VQQAELHTGSLPQIQSTALR3	9532.94	9926.97	9198.28
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	VQQATTENMGLMDNWK	VQQATTENMGLMDNWK	2	VQQATTENMGLMDNWK2	46006.9	49801.8	50797.6
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	VQQATTENMGLMDNWK	VQQATTENMGLMDNWK	3	VQQATTENMGLMDNWK3	54241.4	55335.7	57062.8
A0A0G2JT44	A0A0G2JT44	A0A0G2JT44_RAT	Tmc6	Transmembrane channel-like protein	1	VQQDSIR	VQQDSIR	2	VQQDSIR2	105317	102933	113308
A0A8I6A678	A0A8I6A678	A0A8I6A678_RAT	Snx2	Sorting nexin-2	1	VQQGERDFEQISK	VQQGERDFEQISK	3	VQQGERDFEQISK3	32583.1	24224.5	34908.6
A0A8I5ZTW6	A0A8I5ZTW6	A0A8I5ZTW6_RAT	Gopc	Golgi associated PDZ and coiled-coil motif containing	1	VQQIQLLGR	VQQIQLLGR	2	VQQIQLLGR2	29491	29741.1	37167.1
D3ZUV2	D3ZUV2	D3ZUV2_RAT	Mib1	RING-type E3 ubiquitin transferase	1	VQQIYSDSDLK	VQQIYSDSDLK	2	VQQIYSDSDLK2	3141.19	2406.83	
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	VQQLEQQVK	VQQLEQQVK	2	VQQLEQQVK2	291301	326503	291583
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	VQQLLHICSEHFDSK	VQQLLHIC(UniMod:4)SEHFDSK	3	VQQLLHIC(UniMod:4)SEHFDSK3	11738.1	8409.61	6274.56
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	VQQLLHICSEHFDSK	VQQLLHIC(UniMod:4)SEHFDSK	4	VQQLLHIC(UniMod:4)SEHFDSK4	23567.3	26759.1	26375.3
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	VQQLMAK	VQQLMAK	1	VQQLMAK1	4700.65	2338	1909.65
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	VQQLMAK	VQQLMAK	2	VQQLMAK2	270915	350557	258328
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	VQQLMTK	VQQLMTK	2	VQQLMTK2	12498.9	11819.7	13028.2
A1L134	A1L134	AUP1_RAT	Aup1	Lipid droplet-regulating VLDL assembly factor AUP1	1	VQQLVAK	VQQLVAK	2	VQQLVAK2	45310	47542.9	45417.7
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	VQQLVPK	VQQLVPK	1	VQQLVPK1	50374	45872	35225.9
Q9QXQ0	Q9QXQ0	ACTN4_RAT	Actn4	Alpha-actinin-4	1	VQQLVPK	VQQLVPK	2	VQQLVPK2	790825	837699	836587
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	VQQMAEQVHALK	VQQMAEQVHALK	3	VQQMAEQVHALK3	5274.84	4239.93	6621.29
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	VQQMAEQVHALKEEK	VQQMAEQVHALKEEK	3	VQQMAEQVHALKEEK3	28791.1	23971.4	22995.5
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	VQQMAEQVHALKEEK	VQQMAEQVHALKEEK	4	VQQMAEQVHALKEEK4	39239.2	34163.6	47660.3
Q5HZY0	Q5HZY0	UBXN4_RAT	Ubxn4	UBX domain-containing protein 4	1	VQQMHSLK	VQQMHSLK	2	VQQMHSLK2		5709.94	
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	VQQMVSMGIGNKPFLDIK	VQQMVSMGIGNKPFLDIK	3	VQQMVSMGIGNKPFLDIK3	4430.21	9150.73	
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	VQQQEDEITVLK	VQQQEDEITVLK	2	VQQQEDEITVLK2	24060.7	34915.6	33273.4
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	VQQTVQDLFGR	VQQTVQDLFGR	2	VQQTVQDLFGR2	172244	170926	152060
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	VQQVPENISFPAEEEK	VQQVPENISFPAEEEK	2	VQQVPENISFPAEEEK2	34971.9	38400.2	24933.1
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	VQQVPENISFPAEEEK	VQQVPENISFPAEEEK	3	VQQVPENISFPAEEEK3	16796.5	14257.5	11903.1
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	VQQWSHQQR	VQQWSHQQR	2	VQQWSHQQR2	6586.95		6754.64
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	VQQWSHQQR	VQQWSHQQR	3	VQQWSHQQR3	10947.1		16103.1
Q62835	Q62835	RABE2_RAT	Rabep2	Rab GTPase-binding effector protein 2	1	VQREETDVLEASLCSLR	VQREETDVLEASLC(UniMod:4)SLR	3	VQREETDVLEASLC(UniMod:4)SLR3	35438.8	43750.1	27930.3
Q3KR59	Q3KR59	UBP10_RAT	Usp10	Ubiquitin carboxyl-terminal hydrolase 10	1	VQRPCTSTPMIDSFVR	VQRPC(UniMod:4)TSTPMIDSFVR	3	VQRPC(UniMod:4)TSTPMIDSFVR3	7679.27	21335.9	18702.8
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	VQRPGEASHLR	VQRPGEASHLR	3	VQRPGEASHLR3			4383.97
F1LR42	F1LR42	F1LR42_RAT	Rufy1	RUN and FYVE domain containing 1	1	VQSAESSLQQK	VQSAESSLQQK	2	VQSAESSLQQK2	10044	11991	22476.4
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	VQSALEVNLRPFR	VQSALEVNLRPFR	3	VQSALEVNLRPFR3	19265.1		11871.1
Q793F9	A0A8I6GH80;Q793F9	VPS4A_RAT	Vps4a	Vacuolar protein sorting-associated protein 4A	0	VQSATHFK	VQSATHFK	2	VQSATHFK2	28067.2		12792
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	VQSAVITVPAYFNDSQR	VQSAVITVPAYFNDSQR	2	VQSAVITVPAYFNDSQR2	109640	104764	94952.7
P14659	P14659	HSP72_RAT	Hspa2	Heat shock-related 70 kDa protein 2	1	VQSAVITVPAYFNDSQR	VQSAVITVPAYFNDSQR	3	VQSAVITVPAYFNDSQR3	26765.5	36472.7	37582.6
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	VQSCPDPAVYGVVQSGDHVGR	VQSC(UniMod:4)PDPAVYGVVQSGDHVGR	3	VQSC(UniMod:4)PDPAVYGVVQSGDHVGR3	731271	618806	699709
A0A8I5ZXD6	D4A5F0;A0A8I5ZXD6	A0A8I5ZXD6_RAT	Fam114a1	Family with sequence similarity 114, member A1	0	VQSFLASLDGEK	VQSFLASLDGEK	2	VQSFLASLDGEK2	36552.3	74959	36189.6
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	VQSFQMK	VQSFQMK	2	VQSFQMK2	67776.3	95537.6	80890.1
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	VQSGNINAAK	VQSGNINAAK	2	VQSGNINAAK2	39004	73700.5	69508.4
A0A0G2K3L8	A0A0G2K3L8	A0A0G2K3L8_RAT	Wdfy1	WD repeat and FYVE domain containing 1	1	VQSLCYLQLTR	VQSLC(UniMod:4)YLQLTR	2	VQSLC(UniMod:4)YLQLTR2	18083.9	14300	12510.8
D3ZRJ7	D3ZRJ7	D3ZRJ7_RAT	Lrrk1	non-specific serine/threonine protein kinase	1	VQSSVWLATEDQK	VQSSVWLATEDQK	2	VQSSVWLATEDQK2	1488.73	3815.15	1368.04
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	VQSTGEGEAQR	VQSTGEGEAQR	2	VQSTGEGEAQR2			12061.5
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	VQSTITSR	VQSTITSR	1	VQSTITSR1	70907.6	80296.9	76418.8
A0A8I5ZVC4	A0A8I5ZVC4	A0A8I5ZVC4_RAT	Itih2	Inter-alpha-trypsin inhibitor heavy chain 2	1	VQSTITSR	VQSTITSR	2	VQSTITSR2	1.3163e+08	1.60502e+08	1.43408e+08
Q9Z2F5	Q9Z2F5;Q9EQH5	CTBP1_RAT	Ctbp1	C-terminal-binding protein 1	0	VQSVEQIR	VQSVEQIR	2	VQSVEQIR2	47393.6	36771.8	43201.5
Q3B8P0	Q3B8P0	PARL_RAT	Parl	Presenilin-associated rhomboid-like protein, mitochondrial	1	VQSYFDGIK	VQSYFDGIK	2	VQSYFDGIK2	20019.6		11436.3
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	VQTAHFK	VQTAHFK	2	VQTAHFK2	126384	43012.4	57966.6
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	VQTAVCK	VQTAVC(UniMod:4)K	1	VQTAVC(UniMod:4)K1	3261.37		3464.07
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	VQTAVCK	VQTAVC(UniMod:4)K	2	VQTAVC(UniMod:4)K2	96750.4		132003
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	VQTDFGTPEMLPHVQCK	VQTDFGTPEMLPHVQC(UniMod:4)K	3	VQTDFGTPEMLPHVQC(UniMod:4)K3	73046.8	59073.8	67343.4
P38062	P38062;A0A8I6APQ8	MAP2_RAT	Metap2	Methionine aminopeptidase 2	0	VQTDPPSVPICDLYPNGVFPK	VQTDPPSVPIC(UniMod:4)DLYPNGVFPK	3	VQTDPPSVPIC(UniMod:4)DLYPNGVFPK3		4530.61	4271.68
P0C8E4	P0C8E4	M3K7_RAT	Map3k7	Mitogen-activated protein kinase kinase kinase 7	1	VQTEIALLLQR	VQTEIALLLQR	2	VQTEIALLLQR2	9049.51	7574.31	4000.19
D3ZXY2	D3ZXY2	D3ZXY2_RAT	Pdzd8	PDZ domain containing 8	1	VQTELKEETQPLSHSPK	VQTELKEETQPLSHSPK	4	VQTELKEETQPLSHSPK4	6878.99		6745.62
D4ADD8	D4ADD8	D4ADD8_RAT	Dctn6	Dynactin subunit 6	1	VQTERPQPQTLQLDFLMK	VQTERPQPQTLQLDFLMK	3	VQTERPQPQTLQLDFLMK3	29716.5	21148.9	21805.4
Q5XIP1	Q5XIP1	PELO_RAT	Pelo	Protein pelota homolog	1	VQTESSTGSVGSNR	VQTESSTGSVGSNR	2	VQTESSTGSVGSNR2	37366.4		43045.6
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	VQTLNEQDWER	VQTLNEQDWER	2	VQTLNEQDWER2	39771.3	65769.5	61436.9
D4A7I6	D4A7I6	D4A7I6_RAT	Washc4	WASH complex subunit 4	1	VQTQCDCCFLYWHR	VQTQC(UniMod:4)DC(UniMod:4)C(UniMod:4)FLYWHR	3	VQTQC(UniMod:4)DC(UniMod:4)C(UniMod:4)FLYWHR3	4857.39	18974.9	11013.8
P0C1X8	P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	1	VQTTPPPTIQGQK	VQTTPPPTIQGQK	2	VQTTPPPTIQGQK2	165297	115569	136344
P14046	A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	VQTVPLTCNNPK	VQTVPLTC(UniMod:4)NNPK	2	VQTVPLTC(UniMod:4)NNPK2	86859.3	49539.1	70759.1
P14046	A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	VQTVPLTCNNPK	VQTVPLTC(UniMod:4)NNPK	3	VQTVPLTC(UniMod:4)NNPK3	1.11283e+07	9.53778e+06	1.10234e+07
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	VQTVVLYGTVGTGK	VQTVVLYGTVGTGK	2	VQTVVLYGTVGTGK2	65071.8	59957.1	52313.6
Q5XIG6	Q5XIG6	GALK2_RAT	Galk2	N-acetylgalactosamine kinase	1	VQVAEHPR	VQVAEHPR	2	VQVAEHPR2			3806.62
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VQVALEELQDLK	VQVALEELQDLK	2	VQVALEELQDLK2	210467	259286	224017
A0A8I6AIV4	A0A8I5YB95;A0A8I6AIV4	A0A8I6AIV4_RAT	Dctn3l1	Dynactin 3-like 1	0	VQVALGNIASK	VQVALGNIASK	2	VQVALGNIASK2	200626	202710	191320
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	VQVDGSIGR	VQVDGSIGR	2	VQVDGSIGR2	14766.3	16813.2	14304.3
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	VQVEAIEGGALQK	VQVEAIEGGALQK	2	VQVEAIEGGALQK2	113809	126216	117880
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	VQVEAIEGGALQK	VQVEAIEGGALQK	3	VQVEAIEGGALQK3		6286.55	
P47861	P47861	SYT5_RAT	Syt5	Synaptotagmin-5	1	VQVELTVLDYDK	VQVELTVLDYDK	2	VQVELTVLDYDK2	10438.9	11262.4	9624.43
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	VQVENGLNLQALSQAGPLILPALFK	VQVENGLNLQALSQAGPLILPALFK	3	VQVENGLNLQALSQAGPLILPALFK3	12774.4	428063	648774
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	VQVENGLNLQALSQAGPLILPALFK	VQVENGLNLQALSQAGPLILPALFK	4	VQVENGLNLQALSQAGPLILPALFK4	5058.21		
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	VQVENGLNLQALSQAGPLILPALFKR	VQVENGLNLQALSQAGPLILPALFKR	3	VQVENGLNLQALSQAGPLILPALFKR3	8113.65	11406	10855.5
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	VQVEYKGETK	VQVEYKGETK	2	VQVEYKGETK2	68141.3	55203.7	48393.7
P63018	A0A8I6AQL9;P63018;M0RCB1	HSP7C_RAT	Hspa8	Heat shock cognate 71 kDa protein	0	VQVEYKGETK	VQVEYKGETK	3	VQVEYKGETK3	151703	177553	236530
Q62921	Q62921	HOIL1_RAT	Rbck1	RanBP-type and C3HC4-type zinc finger-containing protein 1	1	VQVKPEVSPTQDIR	VQVKPEVSPTQDIR	3	VQVKPEVSPTQDIR3	2927.48	5297.71	
A0A8I6AAL1	A0A8I6AAL1	A0A8I6AAL1_RAT	Rnf7	Ring finger protein 7	1	VQVMDACLR	VQVMDAC(UniMod:4)LR	2	VQVMDAC(UniMod:4)LR2	11213.7	6542.96	
F1M1H0	F1M1H0	F1M1H0_RAT	Dera	deoxyribose-phosphate aldolase	1	VQVNHAAVLR	VQVNHAAVLR	2	VQVNHAAVLR2	4439.69		
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	VQVNLCR	VQVNLC(UniMod:4)R	2	VQVNLC(UniMod:4)R2	32143.1	38877.3	31427.5
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VQVQDNEGHSVETTVK	VQVQDNEGHSVETTVK	2	VQVQDNEGHSVETTVK2	145997	120311	172670
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VQVQDNEGHSVETTVK	VQVQDNEGHSVETTVK	3	VQVQDNEGHSVETTVK3	27850.5	23659.9	7.3746e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VQVQDNEGHSVETTVKDNGNGTYSCSYVPR	VQVQDNEGHSVETTVKDNGNGTYSC(UniMod:4)SYVPR	4	VQVQDNEGHSVETTVKDNGNGTYSC(UniMod:4)SYVPR4	44586.2	59187.4	67287.5
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	VQVQVVER	VQVQVVER	2	VQVQVVER2	81643.1	72504.5	81544.4
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	VQVSLDEHFSK	VQVSLDEHFSK	3	VQVSLDEHFSK3	15754.4	11653.7	17028.6
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	VQVSPER	VQVSPER	2	VQVSPER2	173048	227449	193220
A0A8I6AA52	A0A8I6AA52	A0A8I6AA52_RAT	Wdr48	WD repeat-containing protein 48	1	VQVSYVIRDEVEK	VQVSYVIRDEVEK	3	VQVSYVIRDEVEK3	12061.1	20163.2	18856.2
O54923	O54923	EXOC6_RAT	Exoc6	Exocyst complex component 6	1	VQVTDTNR	VQVTDTNR	2	VQVTDTNR2	5357.63	14140.1	
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	VQVVSIK	VQVVSIK	2	VQVVSIK2	161848	165613	158428
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	VQVVVPEAETR	VQVVVPEAETR	2	VQVVVPEAETR2	86306	88503.2	83632.6
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	VQVYLHESTQDELAR	VQVYLHESTQDELAR	3	VQVYLHESTQDELAR3	27608.2	59017.8	22126.4
O08618	O08618	KPRB_RAT	Prpsap2	Phosphoribosyl pyrophosphate synthase-associated protein 2	1	VQVYQEPNR	VQVYQEPNR	2	VQVYQEPNR2	39042.6	31499.3	30448.6
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	VQWYPEGVK	VQWYPEGVK	2	VQWYPEGVK2	947401	1.02454e+06	1.07485e+06
P29066	P29066	ARRB1_RAT	Arrb1	Beta-arrestin-1	1	VQYAPERPGPQPTAETTR	VQYAPERPGPQPTAETTR	3	VQYAPERPGPQPTAETTR3	164953	155612	154469
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	VQYEEVAEK	VQYEEVAEK	2	VQYEEVAEK2	23134.4	25585.2	24600
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	VQYEEVAEKDDLMGVEDTAK	VQYEEVAEKDDLMGVEDTAK	3	VQYEEVAEKDDLMGVEDTAK3	5524.55	5786.8	7166.98
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	VQYFWEALNNFTNEDR	VQYFWEALNNFTNEDR	3	VQYFWEALNNFTNEDR3	5114.15	7624.48	8213.61
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	VQYLEDTDPFACANFPEPR	VQYLEDTDPFAC(UniMod:4)ANFPEPR	3	VQYLEDTDPFAC(UniMod:4)ANFPEPR3	154940	146615	172936
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	VQYPDAK	VQYPDAK	2	VQYPDAK2	49127.9	32870.9	32921.7
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	VQYPDAKPVR	VQYPDAKPVR	2	VQYPDAKPVR2	13155.1	22649.1	12511.2
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	VQYPDAKPVR	VQYPDAKPVR	3	VQYPDAKPVR3	176344	199806	202145
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VQYPQSQACK	VQYPQSQAC(UniMod:4)K	2	VQYPQSQAC(UniMod:4)K2	575945	702988	579988
Q4V892	Q4V892	SIGIR_RAT	Sigirr	Single Ig IL-1-related receptor	1	VQYRPVEGDPQTR	VQYRPVEGDPQTR	3	VQYRPVEGDPQTR3	6330.04	5387.51	
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	VQYTCTAGYYTATGK	VQYTC(UniMod:4)TAGYYTATGK	2	VQYTC(UniMod:4)TAGYYTATGK2	12361.8	8892.24	11643.5
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	VQYTVCIWR	VQYTVC(UniMod:4)IWR	2	VQYTVC(UniMod:4)IWR2	485363	452664	427724
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	VQYTVCIWR	VQYTVC(UniMod:4)IWR	3	VQYTVC(UniMod:4)IWR3	179433	202768	177536
Q6P7Q1	Q6P7Q1	BABA2_RAT	Babam2	BRISC and BRCA1-A complex member 2	1	VQYVIQGYHK	VQYVIQGYHK	2	VQYVIQGYHK2	8426.15	7157.08	3172.39
Q6P7Q1	Q6P7Q1	BABA2_RAT	Babam2	BRISC and BRCA1-A complex member 2	1	VQYVIQGYHK	VQYVIQGYHK	3	VQYVIQGYHK3	14367.5	11146.6	17833.5
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	VQYVVDPAVK	VQYVVDPAVK	2	VQYVVDPAVK2	7524.26	13597.4	15742.2
D3Z9C0	D3Z9C0	D3Z9C0_RAT	Mios	Meiosis regulator for oocyte development	1	VQYWIENYR	VQYWIENYR	2	VQYWIENYR2	10657.7	5421.28	10543.4
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VRAWGPGLEGGIVGK	VRAWGPGLEGGIVGK	3	VRAWGPGLEGGIVGK3	7769.06	6828.5	10804.6
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	VRDGNTLTYYR	VRDGNTLTYYR	2	VRDGNTLTYYR2	9922.63	8983.08	2757.39
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	VRDGNTLTYYR	VRDGNTLTYYR	3	VRDGNTLTYYR3	977484	720664	850573
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	VRDGPQWTAGVTVLK	VRDGPQWTAGVTVLK	3	VRDGPQWTAGVTVLK3	13229.7	21496.3	27931.6
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	VRDIPSVTIPGLIPGVSYEVK	VRDIPSVTIPGLIPGVSYEVK	3	VRDIPSVTIPGLIPGVSYEVK3	27890.5	53862.7	57573.3
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	VRDIPSVTIPGLIPGVSYEVK	VRDIPSVTIPGLIPGVSYEVK	4	VRDIPSVTIPGLIPGVSYEVK4	1535.36	4532.12	3471.52
Q5XIE1	Q5XIE1	THEM6_RAT	Them6	Protein THEM6	1	VRDLLAEQLYAGR	VRDLLAEQLYAGR	3	VRDLLAEQLYAGR3	3087.4	12441.3	6604.14
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	VRDLQQQLADADR	VRDLQQQLADADR	3	VRDLQQQLADADR3	6869.95	10293.6	8410.61
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	VRDNICGALAR	VRDNIC(UniMod:4)GALAR	3	VRDNIC(UniMod:4)GALAR3	34233.8	43666.4	46366.7
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	VRDPQLVR	VRDPQLVR	2	VRDPQLVR2	48363.3	48863.9	48786.6
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	VRDQLQTISSSYQTLLDAK	VRDQLQTISSSYQTLLDAK	3	VRDQLQTISSSYQTLLDAK3	98256.3	97527.1	115972
A0A8I5ZQE4	A0A8I5ZQE4	A0A8I5ZQE4_RAT	Supt5h	Transcription elongation factor SPT5	1	VRDTYLDTQIVGQTGVIR	VRDTYLDTQIVGQTGVIR	3	VRDTYLDTQIVGQTGVIR3	4811.99	4783.67	6135.62
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	VREAFQPQEPDFPPPPPDLEQLR	VREAFQPQEPDFPPPPPDLEQLR	3	VREAFQPQEPDFPPPPPDLEQLR3	23163.9	26529.8	31341.7
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	VREATNDDPWGPSGQLMGEIAK	VREATNDDPWGPSGQLMGEIAK	3	VREATNDDPWGPSGQLMGEIAK3	13179.1	22762.5	10819.7
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VREDLPEGTIIMWLEAHDPDVGQSSQVR	VREDLPEGTIIMWLEAHDPDVGQSSQVR	4	VREDLPEGTIIMWLEAHDPDVGQSSQVR4	35046.4	39348.6	39046.7
O88277	O88277	FAT2_RAT	Fat2	Protocadherin Fat 2	1	VREDVTPGHFILK	VREDVTPGHFILK	3	VREDVTPGHFILK3	7666.14		
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	VREECCPGKPLNVFR	VREEC(UniMod:4)C(UniMod:4)PGKPLNVFR	4	VREEC(UniMod:4)C(UniMod:4)PGKPLNVFR4	26021.8	36655.7	37609.5
G3V6A8	G3V6A8	G3V6A8_RAT	Golgb1	Golgin B1	1	VREEEVQK	VREEEVQK	2	VREEEVQK2			10915.7
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	VREEIQK	VREEIQK	2	VREEIQK2			847726
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	VREEIQKELEDLR	VREEIQKELEDLR	2	VREEIQKELEDLR2	25372.8	34938.2	31343.9
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	VREEIQKELEDLR	VREEIQKELEDLR	3	VREEIQKELEDLR3	976309	1.17676e+06	1.23677e+06
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	VREEIQKELEDLR	VREEIQKELEDLR	4	VREEIQKELEDLR4	584564	829542	885962
Q5U308	Q5U308	LRC8D_RAT	Lrrc8d	Volume-regulated anion channel subunit LRRC8D	1	VREESSFSDIPDVK	VREESSFSDIPDVK	3	VREESSFSDIPDVK3	23094.7	21334.9	23749.3
A0A8I6AMA8	A0A8I6AMA8	A0A8I6AMA8_RAT	Smarcc1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	1	VREEVPLELVEAHVK	VREEVPLELVEAHVK	4	VREEVPLELVEAHVK4	4679.4		
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	VREFSITDVVPYPISLR	VREFSITDVVPYPISLR	3	VREFSITDVVPYPISLR3	35184.4	41660.7	41410.5
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	VREFTMAEIEHFVDPTEK	VREFTMAEIEHFVDPTEK	3	VREFTMAEIEHFVDPTEK3	6073.78	4696.37	7940.83
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	VREFTMAEIEHFVDPTEK	VREFTMAEIEHFVDPTEK	4	VREFTMAEIEHFVDPTEK4		6556.61	9742.25
M0R5F1	M0R5F1	M0R5F1_RAT	Aspn	Asporin	1	VREIHLEHNK	VREIHLEHNK	3	VREIHLEHNK3	3110.43		11616.9
D3ZRE7	D3ZRE7	D3ZRE7_RAT	Swap70	Switching B-cell complex subunit SWAP70	1	VRELEDMYLK	VRELEDMYLK	3	VRELEDMYLK3	2605.29		3023.76
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	VRELEKPIFCLK	VRELEKPIFC(UniMod:4)LK	3	VRELEKPIFC(UniMod:4)LK3	49109.4	54345.6	49390.1
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	VRELEKPIFCLK	VRELEKPIFC(UniMod:4)LK	4	VRELEKPIFC(UniMod:4)LK4	88902.1	100225	111263
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	VRELESDLITER	VRELESDLITER	3	VRELESDLITER3	54381.7	47465.3	46001.9
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	VREMELIYAR	VREMELIYAR	3	VREMELIYAR3	16833.2	11411.7	12575.5
D4AD37	D4AD37	IMPA3_RAT	Bpnt2	Golgi-resident adenosine 3',5'-bisphosphate 3'-phosphatase	1	VRESNVLHEK	VRESNVLHEK	3	VRESNVLHEK3	15151.8	4040.53	2769.27
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	VREVSQPDWTPPPEVTLTLTK	VREVSQPDWTPPPEVTLTLTK	3	VREVSQPDWTPPPEVTLTLTK3	87074.9	126174	127303
P68182	P68182;P27791	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	0	VRFPSHFSSDLK	VRFPSHFSSDLK	3	VRFPSHFSSDLK3	60462.4	94147.6	90714
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	VRGADAAQAK	VRGADAAQAK	2	VRGADAAQAK2			1800.17
Q8CF97	Q8CF97	VCIP1_RAT	Vcpip1	Deubiquitinating protein VCPIP1	1	VRGDGSIVYLDGDR	VRGDGSIVYLDGDR	3	VRGDGSIVYLDGDR3	3053.53	5489.86	5941.21
B0BMY6	B0BMY6	B0BMY6_RAT	Otulin	ubiquitinyl hydrolase 1	1	VRGDNYCALR	VRGDNYC(UniMod:4)ALR	3	VRGDNYC(UniMod:4)ALR3	12259.8		4899.28
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	VRGEETDVVLPLAPYVR	VRGEETDVVLPLAPYVR	3	VRGEETDVVLPLAPYVR3	27900.1	26837.4	25162.1
O35806	O35806	LTBP2_RAT	Ltbp2	Latent-transforming growth factor beta-binding protein 2	1	VRGEVDPVPEDNSVETR	VRGEVDPVPEDNSVETR	3	VRGEVDPVPEDNSVETR3	11530.4	8371.85	13214.8
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	VRGPEYDAFLDEFMEAASSK	VRGPEYDAFLDEFMEAASSK	3	VRGPEYDAFLDEFMEAASSK3	19645.4	24084.9	22975.9
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	VRGPVSGSPDSMNVSR	VRGPVSGSPDSMNVSR	3	VRGPVSGSPDSMNVSR3	12042	18501	16458.8
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	VRIDEYDYSKPIEGQQK	VRIDEYDYSKPIEGQQK	3	VRIDEYDYSKPIEGQQK3	13681.8	11731.1	10935.6
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	VRIDEYDYSKPIEGQQK	VRIDEYDYSKPIEGQQK	4	VRIDEYDYSKPIEGQQK4	46850.7	52742	52746.8
Q920J4	Q920J4	TXNL1_RAT	Txnl1	Thioredoxin-like protein 1	1	VRIDQYQGADAVGLEEK	VRIDQYQGADAVGLEEK	3	VRIDQYQGADAVGLEEK3	37247.2	37044.4	33847.3
Q5XIC1	Q5XIC1	GMPPA_RAT	Gmppa	Mannose-1-phosphate guanyltransferase alpha	1	VRIPAEVLILNSIVLPHK	VRIPAEVLILNSIVLPHK	4	VRIPAEVLILNSIVLPHK4	3541.48		6003.84
Q03114	Q03114	CDK5_RAT	Cdk5	Cyclin-dependent kinase 5	1	VRLDDDDEGVPSSALR	VRLDDDDEGVPSSALR	3	VRLDDDDEGVPSSALR3	15538.6	13079.6	6031.05
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	VRLDHYQYLALLR	VRLDHYQYLALLR	3	VRLDHYQYLALLR3	2950.47	5008.77	1360.73
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	VRLDHYQYLALLR	VRLDHYQYLALLR	4	VRLDHYQYLALLR4	11465.9	10331.9	13312.4
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	VRLEILEELVK	VRLEILEELVK	3	VRLEILEELVK3	16725.4	28977.8	15268.3
B5DEH0	B5DEH0	LIMD1_RAT	Limd1	LIM domain-containing protein 1	1	VRLPCQTLTPGPELGPSTAELK	VRLPC(UniMod:4)QTLTPGPELGPSTAELK	3	VRLPC(UniMod:4)QTLTPGPELGPSTAELK3	12838.7	14015	16728.1
Q6AYE5	Q6AYE5	OAF_RAT	Oaf	Out at first protein homolog	1	VRLPDGQVTEESLQADSDADSISLDLR	VRLPDGQVTEESLQADSDADSISLDLR	3	VRLPDGQVTEESLQADSDADSISLDLR3	3131.65	2405.73	2415.48
A0A8I5ZP57	A0A8I5ZP57	A0A8I5ZP57_RAT	Pkdcc	Protein kinase domain containing, cytoplasmic	1	VRLPGGAAVALK	VRLPGGAAVALK	3	VRLPGGAAVALK3	27402.9	41323	39975.5
B0BNB9	B0BNB9	B0BNB9_RAT	Htra2	HtrA serine peptidase 2	1	VRLPSGDTYEAMVTAVDPVADIATLR	VRLPSGDTYEAMVTAVDPVADIATLR	3	VRLPSGDTYEAMVTAVDPVADIATLR3	19630.2	17619.5	18684.5
P14046	Q6IE52;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	VRLVDIK	VRLVDIK	2	VRLVDIK2	45210.2	38488.1	33156.9
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	VRLVDIKGDPIPNEQVLIK	VRLVDIKGDPIPNEQVLIK	3	VRLVDIKGDPIPNEQVLIK3	91610.8	69223.7	99341.9
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	VRLVDIKGDPIPNEQVLIK	VRLVDIKGDPIPNEQVLIK	4	VRLVDIKGDPIPNEQVLIK4	238481	211110	256790
A0A8I6A7A4	A0A8I6A7A4	A0A8I6A7A4_RAT	Ddx3y	RNA helicase	1	VRPCVVYGGADTVQQIR	VRPC(UniMod:4)VVYGGADTVQQIR	3	VRPC(UniMod:4)VVYGGADTVQQIR3	8525.82	4869.13	3502.27
D4ADE8	D4ADE8	D4ADE8_RAT	Ddx3x	RNA helicase	1	VRPCVVYGGAEIGQQIR	VRPC(UniMod:4)VVYGGAEIGQQIR	3	VRPC(UniMod:4)VVYGGAEIGQQIR3	53126.4	57634.1	50079.4
Q641X3	Q641X3	HEXA_RAT	Hexa	Beta-hexosaminidase subunit alpha	1	VRPDTIIQVWR	VRPDTIIQVWR	3	VRPDTIIQVWR3	90322.1	85544.6	88907.4
D4ABM5	D4ABM5	D4ABM5_RAT	Mrps34	Mitochondrial ribosomal protein S34	1	VRPDYTAQNLDHGR	VRPDYTAQNLDHGR	4	VRPDYTAQNLDHGR4	9390.19	13254	12151.5
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	VRPEQLVK	VRPEQLVK	2	VRPEQLVK2	123109	138033	96747.1
Q68FT7	Q68FT7	Q68FT7_RAT	Farsb	Phenylalanine--tRNA ligase beta subunit	1	VRPFAVAAVLR	VRPFAVAAVLR	3	VRPFAVAAVLR3	11646.1	10732.9	11863.5
A0A8I6ABZ7	A0A8I6ABZ7	A0A8I6ABZ7_RAT	Dhx9	RNA helicase	1	VRPGFCFHLCSR	VRPGFC(UniMod:4)FHLC(UniMod:4)SR	4	VRPGFC(UniMod:4)FHLC(UniMod:4)SR4	7672	2019.47	
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	VRPHMAPTDGEFDCK	VRPHMAPTDGEFDC(UniMod:4)K	3	VRPHMAPTDGEFDC(UniMod:4)K3	273780	336630	284435
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	VRPHMAPTDGEFDCK	VRPHMAPTDGEFDC(UniMod:4)K	4	VRPHMAPTDGEFDC(UniMod:4)K4	108424	154417	96587.2
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	VRPKQLVHHFEIDVDIFEPQGISR	VRPKQLVHHFEIDVDIFEPQGISR	4	VRPKQLVHHFEIDVDIFEPQGISR4	46279.4	42275.1	51677.3
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	VRPLNTEGSLNLLGLETIR	VRPLNTEGSLNLLGLETIR	3	VRPLNTEGSLNLLGLETIR3	51889.4	66352.4	52296.4
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	VRPPQEEQER	VRPPQEEQER	3	VRPPQEEQER3	16307.1		33377.8
Q8VHF0	Q8VHF0	MARK3_RAT	Mark3	MAP/microtubule affinity-regulating kinase 3	1	VRPSSDLSNSTGQSPHHK	VRPSSDLSNSTGQSPHHK	3	VRPSSDLSNSTGQSPHHK3			1008.15
D3ZIT4	D3ZIT4	D3ZIT4_RAT	Anapc7	Anaphase promoting complex subunit 7	1	VRPSTGNSASTPQSQCLPSEIEVK	VRPSTGNSASTPQSQC(UniMod:4)LPSEIEVK	3	VRPSTGNSASTPQSQC(UniMod:4)LPSEIEVK3	9599.08	5595.02	8264.04
Q63619	Q63619	COQ7_RAT	Coq7	5-demethoxyubiquinone hydroxylase, mitochondrial (Fragment)	1	VRPTVLMPLWNVAGFALGAGTALLGK	VRPTVLMPLWNVAGFALGAGTALLGK	3	VRPTVLMPLWNVAGFALGAGTALLGK3		4323.81	
A0A8I5ZZ89	A0A8I5ZZ89	A0A8I5ZZ89_RAT	Elp3	Elongator complex protein 3	1	VRPYQVELVR	VRPYQVELVR	3	VRPYQVELVR3	8408.47	3728.34	7246.03
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	VRPYVHGPPQDLSVHLWYAGPMER	VRPYVHGPPQDLSVHLWYAGPMER	4	VRPYVHGPPQDLSVHLWYAGPMER4	17181.6	20936.8	9264.63
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VRTELADK	VRTELADK	2	VRTELADK2	850343	1.2066e+06	1.04868e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VRTELADKVSK	VRTELADKVSK	3	VRTELADKVSK3	5585.37	9851.19	13797
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	VRVDLFPTDIGLHK	VRVDLFPTDIGLHK	3	VRVDLFPTDIGLHK3	9507.94	7485.33	10054
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	VRVDLFPTDIGLHK	VRVDLFPTDIGLHK	4	VRVDLFPTDIGLHK4	11289.3	12932.4	26270.2
M0R4P9	M0R4P9	M0R4P9_RAT	Ube2h	Ubiquitin-conjugating enzyme E2H	1	VRVDLPDKYPFK	VRVDLPDKYPFK	3	VRVDLPDKYPFK3	32832.3	20465	23708.8
Q5XIM9	Q5XIM9	TCPB_RAT	Cct2	T-complex protein 1 subunit beta	1	VRVDSTAK	VRVDSTAK	2	VRVDSTAK2			8905.22
Q99P39	Q99P39	NFS1_RAT	Nfs1	Cysteine desulfurase	1	VRVEALQSGGGQER	VRVEALQSGGGQER	3	VRVEALQSGGGQER3	5307.64	9781.16	4924.93
P01026	P01026	CO3_RAT	C3	Complement C3	1	VRVELLHNPAFCSMATAK	VRVELLHNPAFC(UniMod:4)SMATAK	3	VRVELLHNPAFC(UniMod:4)SMATAK3	299268	296181	238072
P01026	P01026	CO3_RAT	C3	Complement C3	1	VRVELLHNPAFCSMATAK	VRVELLHNPAFC(UniMod:4)SMATAK	4	VRVELLHNPAFC(UniMod:4)SMATAK4	1.77444e+06	1.83286e+06	1.69652e+06
A0A8I6AFZ5	A0A8I6AFZ5	A0A8I6AFZ5_RAT	Srsf7	Serine and arginine rich splicing factor 7	1	VRVELSTGMPR	VRVELSTGMPR	3	VRVELSTGMPR3	7049.79	9152.62	12187.9
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	VRVFREFHLHLR	VRVFREFHLHLR	4	VRVFREFHLHLR4	18587	19772.4	18503.8
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	VRVGDLNTEQEDGGEMVHEVDMIIK	VRVGDLNTEQEDGGEMVHEVDMIIK	3	VRVGDLNTEQEDGGEMVHEVDMIIK3	4934.18	1108.95	3996.73
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	VRVGDLNTEQEDGGEMVHEVDMIIK	VRVGDLNTEQEDGGEMVHEVDMIIK	4	VRVGDLNTEQEDGGEMVHEVDMIIK4	20969.1	16927.1	18184
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VRVHGPGIQSGTTNKPNK	VRVHGPGIQSGTTNKPNK	3	VRVHGPGIQSGTTNKPNK3	2756.62	8841.54	9865.17
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VRVHGPGIQSGTTNKPNK	VRVHGPGIQSGTTNKPNK	4	VRVHGPGIQSGTTNKPNK4	7110.76	28563.1	40127
D4A7F0	D4A7F0	D4A7F0_RAT	Ubr3	E3 ubiquitin-protein ligase	1	VRVPETAPELK	VRVPETAPELK	3	VRVPETAPELK3	6572.58	12283.1	8098.52
P82471	P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	1	VRVPTTGIIEYPFDLQSVIFR	VRVPTTGIIEYPFDLQSVIFR	3	VRVPTTGIIEYPFDLQSVIFR3	30027.4	45506.6	27675.7
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	VSAAMYK	VSAAMYK	1	VSAAMYK1	1643.01	4846.02	2926.98
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	VSAAMYK	VSAAMYK	2	VSAAMYK2	265498	289983	270279
A0A8I5ZS69	A0A8I5ZS69	A0A8I5ZS69_RAT	Snx6	Sorting nexin	1	VSADEDLK	VSADEDLK	2	VSADEDLK2	171075	152115	155630
D4AC36	D4AC36	D4AC36_RAT	Eif3f	Eukaryotic translation initiation factor 3 subunit F	1	VSADNTVGR	VSADNTVGR	2	VSADNTVGR2	207611	180463	175151
F7EWF8	F7EWF8	F7EWF8_RAT	Anapc2	Anaphase-promoting complex subunit 2	1	VSAEAVTTTLHQVTR	VSAEAVTTTLHQVTR	3	VSAEAVTTTLHQVTR3	13521.8	15511.4	9185.72
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	VSAENLQK	VSAENLQK	2	VSAENLQK2	276223	372858	384868
P82471	P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	1	VSAFENPYVDAIK	VSAFENPYVDAIK	2	VSAFENPYVDAIK2	589416	545443	540633
P28077	P28077	PSB9_RAT	Psmb9	Proteasome subunit beta type-9	1	VSAGAAVVNR	VSAGAAVVNR	2	VSAGAAVVNR2	1.50875e+06	1.44557e+06	1.50313e+06
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	VSAGLSLPADSR	VSAGLSLPADSR	2	VSAGLSLPADSR2	15945	14994.5	8197.68
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	VSAGNENAWLTTK	VSAGNENAWLTTK	2	VSAGNENAWLTTK2	2228.39	8399.49	7356.39
D3ZML4	D3ZML4	D3ZML4_RAT	Trabd	TraB domain containing	1	VSAHITEQLGMAPGGEFR	VSAHITEQLGMAPGGEFR	3	VSAHITEQLGMAPGGEFR3	5054.27	8283.3	9988.16
A0A8I6A371	A0A8I6A371	A0A8I6A371_RAT	Nmi	N-myc (and STAT) interactor	1	VSAHPVPLSTGVR	VSAHPVPLSTGVR	3	VSAHPVPLSTGVR3	60726.5	43441.6	41436.4
D4AB50	D4AB50	D4AB50_RAT	Arhgap10	Rho GTPase activating protein 10	1	VSAIHFLVHK	VSAIHFLVHK	3	VSAIHFLVHK3	45401.3	48761.8	43477.2
A0A8I6A502	A0A8I6A502	A0A8I6A502_RAT	Tns3	Tensin 3	1	VSALMEPSQK	VSALMEPSQK	2	VSALMEPSQK2	12193.8	14569.8	10005.9
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	VSALNSVHCEHVEDEGESR	VSALNSVHC(UniMod:4)EHVEDEGESR	3	VSALNSVHC(UniMod:4)EHVEDEGESR3	3112.4		
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	VSALNSVHCEHVEDEGESR	VSALNSVHC(UniMod:4)EHVEDEGESR	4	VSALNSVHC(UniMod:4)EHVEDEGESR4	6146.16	2616.44	11825.6
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	VSALNVLQDLGLFGLYK	VSALNVLQDLGLFGLYK	3	VSALNVLQDLGLFGLYK3		5772.64	8387.02
P80385	P80385	AAKG1_RAT	Prkag1	5'-AMP-activated protein kinase subunit gamma-1	1	VSALPVVDEK	VSALPVVDEK	2	VSALPVVDEK2	87861.1	100422	106219
F1LR42	F1LR42	F1LR42_RAT	Rufy1	RUN and FYVE domain containing 1	1	VSALQLQLSQLR	VSALQLQLSQLR	2	VSALQLQLSQLR2	9465.68	9367.39	5116.89
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	VSALSVVR	VSALSVVR	2	VSALSVVR2	112098	208941	149190
D3ZTX0	D3ZTX0	TMED7_RAT	Tmed7	Transmembrane emp24 domain-containing protein 7	1	VSALTQMESACVSIHEALK	VSALTQMESAC(UniMod:4)VSIHEALK	3	VSALTQMESAC(UniMod:4)VSIHEALK3	80312.5	70260.8	65298.7
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	VSALWEGLPGNLDAAVYSPR	VSALWEGLPGNLDAAVYSPR	3	VSALWEGLPGNLDAAVYSPR3	51694.1	43445.5	42262.5
A0A8I6GJ51	A0A8I6GJ51	A0A8I6GJ51_RAT	Ccdc85a	Coiled-coil domain containing 85A	1	VSAMLDHSNLIR	VSAMLDHSNLIR	3	VSAMLDHSNLIR3	11401.6		7043.34
A0A8I6G9X6	A0A8I6G9X6	A0A8I6G9X6_RAT	Kntc1	Kinetochore associated 1	1	VSAPELIPSVLEK	VSAPELIPSVLEK	2	VSAPELIPSVLEK2	11318.8	6722.23	14615.9
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	VSAPNLLHVK	VSAPNLLHVK	2	VSAPNLLHVK2	5120.48	3181.77	7345.56
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	VSAPYITEECLR	VSAPYITEEC(UniMod:4)LR	2	VSAPYITEEC(UniMod:4)LR2	36010.4	36549	39209
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	VSAQCLSEIEMAK	VSAQC(UniMod:4)LSEIEMAK	2	VSAQC(UniMod:4)LSEIEMAK2	38562.2	38623.9	33697.2
A0A8I6A4G0	A0A8I6A4G0;A0A8I6AEG8;A0A8I6A502	A0A8I6A4G0_RAT	Tns1	Tensin 1	0	VSAQGITLTDNQR	VSAQGITLTDNQR	2	VSAQGITLTDNQR2	37759.9	42252.8	34266.4
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	VSAQLDQVTAK	VSAQLDQVTAK	2	VSAQLDQVTAK2	21934.1	24362	23945.7
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	VSASDVDEGNNGLIHYSILK	VSASDVDEGNNGLIHYSILK	3	VSASDVDEGNNGLIHYSILK3	7584.62	11747.9	15065.3
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	VSASPLLYTLMGK	VSASPLLYTLMGK	2	VSASPLLYTLMGK2	67975.7	59278.9	47683.4
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	VSATENSLVAHPVPAEDDTCNSQGR	VSATENSLVAHPVPAEDDTC(UniMod:4)NSQGR	3	VSATENSLVAHPVPAEDDTC(UniMod:4)NSQGR3	29558.2	21922	20066.7
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	VSATLLSGSDSK	VSATLLSGSDSK	2	VSATLLSGSDSK2	3.19902e+06	1.24603e+06	1.05791e+06
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	VSATLLSGSDSK	VSATLLSGSDSK	3	VSATLLSGSDSK3	9798.94	10767.8	
D3ZMV1	D3ZMV1	D3ZMV1_RAT	Sla2	Src-like-adaptor 2	1	VSAVALGSFPAGEQAR	VSAVALGSFPAGEQAR	2	VSAVALGSFPAGEQAR2	23164.8	18308.3	23633.9
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	VSAVDKDFGPNGEVR	VSAVDKDFGPNGEVR	3	VSAVDKDFGPNGEVR3	31859.7	37292.7	38530.9
A0A8I6AE91	A0A8I6AE91	A0A8I6AE91_RAT	Gga2	Golgi associated, gamma adaptin ear containing, ARF binding protein 2	1	VSAVEEVR	VSAVEEVR	2	VSAVEEVR2	15870.2	20341.5	17697.2
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	VSAWEEVQQR	VSAWEEVQQR	2	VSAWEEVQQR2	3626.77	4315.36	6277.62
Q8R4Z9	Q8R4Z9	MFN1_RAT	Mfn1	Mitofusin-1	1	VSCAMTDEICR	VSC(UniMod:4)AMTDEIC(UniMod:4)R	2	VSC(UniMod:4)AMTDEIC(UniMod:4)R2	3443.6	3150.69	5491.67
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	VSCEAFPK	VSC(UniMod:4)EAFPK	2	VSC(UniMod:4)EAFPK2	90065.5	118149	55285.3
A0A0U1RS29	A0A0U1RS29	A0A0U1RS29_RAT	Rgl2	Ral guanine nucleotide dissociation stimulator-like 2	1	VSCEVEPSGTIDSPAAR	VSC(UniMod:4)EVEPSGTIDSPAAR	2	VSC(UniMod:4)EVEPSGTIDSPAAR2	11214.1	11152.2	7796.14
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	VSCFNVR	VSC(UniMod:4)FNVR	2	VSC(UniMod:4)FNVR2	509063	519284	529749
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	VSCLDTCGDLLVTLQSLSR	VSC(UniMod:4)LDTC(UniMod:4)GDLLVTLQSLSR	3	VSC(UniMod:4)LDTC(UniMod:4)GDLLVTLQSLSR3	11419.2	11014.2	9295.18
P54313	A0A8I5ZM25;P54311;P54313	GBB2_RAT	Gnb2	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2	0	VSCLGVTDDGMAVATGSWDSFLK	VSC(UniMod:4)LGVTDDGMAVATGSWDSFLK	3	VSC(UniMod:4)LGVTDDGMAVATGSWDSFLK3	32798.6	29900	40046.2
O35353	O35353	GBB4_RAT	Gnb4	Guanine nucleotide-binding protein subunit beta-4	1	VSCLGVTDDGMAVATGSWDSFLR	VSC(UniMod:4)LGVTDDGMAVATGSWDSFLR	3	VSC(UniMod:4)LGVTDDGMAVATGSWDSFLR3	16169.9	16177.5	19119.1
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	VSCPIMPCSNATVPDGECCPR	VSC(UniMod:4)PIMPC(UniMod:4)SNATVPDGEC(UniMod:4)C(UniMod:4)PR	3	VSC(UniMod:4)PIMPC(UniMod:4)SNATVPDGEC(UniMod:4)C(UniMod:4)PR3	18080.6	12734.1	10991.4
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	VSCSDNEFTQALTAAIPPESLTR	VSC(UniMod:4)SDNEFTQALTAAIPPESLTR	3	VSC(UniMod:4)SDNEFTQALTAAIPPESLTR3	39361.3	23415.4	40282
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	VSCSPASAQLLSVLQGLMHLEPAAR	VSC(UniMod:4)SPASAQLLSVLQGLMHLEPAAR	3	VSC(UniMod:4)SPASAQLLSVLQGLMHLEPAAR3			18930.1
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	VSCSPASAQLLSVLQGLMHLEPAAR	VSC(UniMod:4)SPASAQLLSVLQGLMHLEPAAR	4	VSC(UniMod:4)SPASAQLLSVLQGLMHLEPAAR4		1805.71	6860.83
A0A8I5Y9E9	A0A8I5Y9E9	A0A8I5Y9E9_RAT	Trem2	Triggering receptor expressed on myeloid cells 2	1	VSCTYDALR	VSC(UniMod:4)TYDALR	2	VSC(UniMod:4)TYDALR2	113228	128929	137274
A0A8I6ALZ6	A0A8I6ALZ6	A0A8I6ALZ6_RAT	ENSRNOG00000067516	Ig-like domain-containing protein	1	VSCVASGFTFSSYVMHWFR	VSC(UniMod:4)VASGFTFSSYVMHWFR	3	VSC(UniMod:4)VASGFTFSSYVMHWFR3	4454.01		
D3ZUB7	D3ZUB7	D3ZUB7_RAT	Anapc4	Anaphase-promoting complex subunit 4	1	VSCVLSSNLR	VSC(UniMod:4)VLSSNLR	2	VSC(UniMod:4)VLSSNLR2	20731.8	20120.9	16236.1
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	VSDAHLDR	VSDAHLDR	2	VSDAHLDR2	13450.4		
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	VSDAISTQYPVVDHEFDAVVVGAGGAGLR	VSDAISTQYPVVDHEFDAVVVGAGGAGLR	3	VSDAISTQYPVVDHEFDAVVVGAGGAGLR3	60663	66188.4	51543.4
A0A0G2K6E3	A0A0G2K6E3	A0A0G2K6E3_RAT	Myo1g	Myosin IG	1	VSDCIPLSQR	VSDC(UniMod:4)IPLSQR	2	VSDC(UniMod:4)IPLSQR2	67612.9	83492.2	75478.8
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	VSDDIIIK	VSDDIIIK	1	VSDDIIIK1	2816.36		3274.71
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	VSDDIIIK	VSDDIIIK	2	VSDDIIIK2	173865	143427	146870
Q704S8	Q704S8	CACP_RAT	Crat	Carnitine O-acetyltransferase	1	VSDDVYR	VSDDVYR	2	VSDDVYR2	19583.2	16835.2	14116.7
B2GUZ5	B2GUZ5	CAZA1_RAT	Capza1	F-actin-capping protein subunit alpha-1	1	VSDEEKVR	VSDEEKVR	2	VSDEEKVR2			4259.1
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	VSDEHLLFATCSNDGTVK	VSDEHLLFATC(UniMod:4)SNDGTVK	3	VSDEHLLFATC(UniMod:4)SNDGTVK3		5214.29	11046.1
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	VSDEVGFGLEHVSR	VSDEVGFGLEHVSR	2	VSDEVGFGLEHVSR2	21924.9	7701.84	14536
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	VSDEVGFGLEHVSR	VSDEVGFGLEHVSR	3	VSDEVGFGLEHVSR3	103138	128062	141570
P41243	P41243	MATK_RAT	Matk	Megakaryocyte-associated tyrosine-protein kinase	1	VSDFGLAK	VSDFGLAK	2	VSDFGLAK2	58852.4	52595.5	47965.8
A0A0G2K6M9	P09759;P54759;A0A8I5ZVE3;A0A0G2K6M9;O08680;M0RDA4;P29321;P54757;D3ZBN3;P54758;F1MAJ0	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	0	VSDFGLSR	VSDFGLSR	2	VSDFGLSR2	161639	184738	176301
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	VSDFGLTK	VSDFGLTK	2	VSDFGLTK2	126810	91886.5	66517.6
P0C548	P0C548	PLPL2_RAT	Pnpla2	Patatin-like phospholipase domain-containing protein 2	1	VSDGENVIISHFSSK	VSDGENVIISHFSSK	3	VSDGENVIISHFSSK3	9845.91	9752.86	15226.1
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	VSDGINMNSHQEVFTSLFHK	VSDGINMNSHQEVFTSLFHK	3	VSDGINMNSHQEVFTSLFHK3	88459.2	70907.7	85549.3
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	VSDGINMNSHQEVFTSLFHK	VSDGINMNSHQEVFTSLFHK	4	VSDGINMNSHQEVFTSLFHK4	97418.2	129353	202932
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	VSDGMQASGPATLK	VSDGMQASGPATLK	2	VSDGMQASGPATLK2	121091	138070	121742
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	VSDGQFHTVIAR	VSDGQFHTVIAR	3	VSDGQFHTVIAR3	6919.24	8486.44	15164.3
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	VSDHTEYWEAGMEL	VSDHTEYWEAGMEL	2	VSDHTEYWEAGMEL2	23578.7	22957.7	22657.8
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	VSDIEPTMPFTK	VSDIEPTMPFTK	2	VSDIEPTMPFTK2	30431	29999.2	32541.6
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	VSDILHSIFSSYK	VSDILHSIFSSYK	2	VSDILHSIFSSYK2	4379.65		2199.11
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	VSDILHSIFSSYK	VSDILHSIFSSYK	3	VSDILHSIFSSYK3	111008	108382	105607
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	VSDIYLSK	VSDIYLSK	2	VSDIYLSK2	18982.1	17565.1	11842.9
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	VSDLDRK	VSDLDRK	2	VSDLDRK2			11047.5
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	VSDLETEK	VSDLETEK	2	VSDLETEK2	16536.3	13528.7	38891.8
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	VSDLGQFIR	VSDLGQFIR	2	VSDLGQFIR2	27207.1	32221.2	26707.4
G3V8R8	G3V8R8	G3V8R8_RAT	Kcnk6	Potassium channel subfamily K member	1	VSDLHGLTELILLPDPDPAR	VSDLHGLTELILLPDPDPAR	3	VSDLHGLTELILLPDPDPAR3	21614	24096.8	36354.7
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	VSDSLQTSR	VSDSLQTSR	2	VSDSLQTSR2	61574.5	63328.6	60308.7
Q3KRD5	Q3KRD5	TOM34_RAT	Tomm34	Mitochondrial import receptor subunit TOM34	1	VSDSVEQLR	VSDSVEQLR	2	VSDSVEQLR2	12962.4	8469.82	11573.9
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	VSDTPSITAK	VSDTPSITAK	2	VSDTPSITAK2	49606.9	43997.5	40677.4
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	VSDVYDIEER	VSDVYDIEER	2	VSDVYDIEER2	721394	775710	786379
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	VSEAAPPGQLVAR	VSEAAPPGQLVAR	2	VSEAAPPGQLVAR2	23890.7	38573.9	34232
Q05030	Q05030	PGFRB_RAT	Pdgfrb	Platelet-derived growth factor receptor beta	1	VSEAGYYTMR	VSEAGYYTMR	2	VSEAGYYTMR2	37550.4	34818.7	37302.3
A0A8I5ZPZ9	A0A8I5ZPZ9	A0A8I5ZPZ9_RAT	Ptpa	Serine/threonine-protein phosphatase 2A activator	1	VSEAIEK	VSEAIEK	2	VSEAIEK2	62643.3	59665.1	51124
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	VSEAVVSVR	VSEAVVSVR	2	VSEAVVSVR2	58309.6	58598.6	60004
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	VSEDLNQAFK	VSEDLNQAFK	2	VSEDLNQAFK2	8790.93		10224.5
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	VSEDLVSIHLPLSR	VSEDLVSIHLPLSR	2	VSEDLVSIHLPLSR2	5189.22	3184.48	3134.52
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	VSEDLVSIHLPLSR	VSEDLVSIHLPLSR	3	VSEDLVSIHLPLSR3	7377.78	12055.3	10671.5
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	VSEEAESQQWDTSK	VSEEAESQQWDTSK	2	VSEEAESQQWDTSK2	319623	309427	342278
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	VSEEAESQQWDTSK	VSEEAESQQWDTSK	3	VSEEAESQQWDTSK3	13520.9	21256.3	25067.1
P98193	P98193	DMP1_RAT	Dmp1	Dentin matrix acidic phosphoprotein 1	1	VSEEDDRGELADSNSR	VSEEDDRGELADSNSR	3	VSEEDDRGELADSNSR3	195102	207865	173035
F7F5Q9	F7F5Q9	F7F5Q9_RAT	Hcls1	Hematopoietic cell specific Lyn substrate 1	1	VSEEHDILK	VSEEHDILK	2	VSEEHDILK2	11341	10727.6	6187.29
F7F5Q9	F7F5Q9	F7F5Q9_RAT	Hcls1	Hematopoietic cell specific Lyn substrate 1	1	VSEEHDILKK	VSEEHDILKK	2	VSEEHDILKK2	4095.31	8190.6	3510.43
F7F5Q9	F7F5Q9	F7F5Q9_RAT	Hcls1	Hematopoietic cell specific Lyn substrate 1	1	VSEEHDILKK	VSEEHDILKK	3	VSEEHDILKK3	159541	212844	199409
F1LN92	F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	1	VSEEIFFGR	VSEEIFFGR	2	VSEEIFFGR2	9436.66	11259.4	10596.6
Q5FVC7	Q5FVC7	ACAP2_RAT	Acap2	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2	1	VSEEKENALVK	VSEEKENALVK	3	VSEEKENALVK3	9041.03	13517.1	
E9PST5	E9PST5	E9PST5_RAT	Acin1	Apoptotic chromatin condensation inducer 1	1	VSEESVLPLAQR	VSEESVLPLAQR	2	VSEESVLPLAQR2	10320.8	11664.1	8934.19
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	VSEEWYNR	VSEEWYNR	2	VSEEWYNR2	49214.2	45699.8	45375.9
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	VSEGHVEQCSCIEGQAR	VSEGHVEQC(UniMod:4)SC(UniMod:4)IEGQAR	2	VSEGHVEQC(UniMod:4)SC(UniMod:4)IEGQAR2	13589.8	4335.61	10370.5
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	VSEGHVEQCSCIEGQAR	VSEGHVEQC(UniMod:4)SC(UniMod:4)IEGQAR	3	VSEGHVEQC(UniMod:4)SC(UniMod:4)IEGQAR3	359485	334188	284298
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	VSEHFSAMFR	VSEHFSAMFR	2	VSEHFSAMFR2	74200.8	82264	60804.4
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	VSEHFSAMFR	VSEHFSAMFR	3	VSEHFSAMFR3	463330	434677	405918
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	VSEILSALER	VSEILSALER	2	VSEILSALER2	435078	409485	464337
G3V8Y8	G3V8Y8	G3V8Y8_RAT	Hip1	Huntingtin interacting protein 1	1	VSELEAELAEQQHLGR	VSELEAELAEQQHLGR	3	VSELEAELAEQQHLGR3	5463.97	13722.9	6171.71
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	VSELESQHMLPTSAEQILATK	VSELESQHMLPTSAEQILATK	3	VSELESQHMLPTSAEQILATK3	6394.72	11880.3	14838.6
A0A8I5ZS69	A0A8I5ZS69	A0A8I5ZS69_RAT	Snx6	Sorting nexin	1	VSELFDK	VSELFDK	2	VSELFDK2	116297	126635	122090
D4ABV1	D4ABV1	D4ABV1_RAT	Gtpbp2	GTP binding protein 2	1	VSELFGGCCRPGGGPAMGGNLK	VSELFGGC(UniMod:4)C(UniMod:4)RPGGGPAMGGNLK	3	VSELFGGC(UniMod:4)C(UniMod:4)RPGGGPAMGGNLK3	10272.5	7310.5	9302.29
Q9QY17	Q9QY17	PACN2_RAT	Pacsin2	Protein kinase C and casein kinase substrate in neurons 2 protein	1	VSELHLEVK	VSELHLEVK	2	VSELHLEVK2	19069.4	16289.5	10080.2
Q6IMY8	Q6IMY8	HNRPU_RAT	Hnrnpu	Heterogeneous nuclear ribonucleoprotein U	1	VSELKEELKK	VSELKEELKK	3	VSELKEELKK3	20464.4	30327.2	15336.3
D3Z9K5	D3Z9K5	D3Z9K5_RAT	Wfikkn2	WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2	1	VSELTEEPDSGR	VSELTEEPDSGR	2	VSELTEEPDSGR2	5793.65	2887.24	1094.59
A0A8I5ZQH3	A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	1	VSELTQQALQR	VSELTQQALQR	2	VSELTQQALQR2	9501.03	7851.27	8219.57
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	VSENDFEDLLPNQGFSK	VSENDFEDLLPNQGFSK	2	VSENDFEDLLPNQGFSK2	26370.8	24610.3	20765
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	VSENDFEDLLPNQGFSK	VSENDFEDLLPNQGFSK	3	VSENDFEDLLPNQGFSK3	14228.4	16872.2	20596.4
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	VSENEEEKPSDTPK	VSENEEEKPSDTPK	2	VSENEEEKPSDTPK2	1985.37		
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	VSENEEEKPSDTPK	VSENEEEKPSDTPK	3	VSENEEEKPSDTPK3	5308.41		2739.74
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	VSENELLR	VSENELLR	2	VSENELLR2	10693.4	9399.57	15151.1
A0A8I6AGS4	A0A8I6AGS4	A0A8I6AGS4_RAT	Abi3bp	ABI family member 3 binding protein	1	VSEPISAGR	VSEPISAGR	2	VSEPISAGR2	56476.5	70932	45115.5
D4ADF5	D4ADF5	D4ADF5_RAT	Pdcd5	Programmed cell death 5	1	VSEQGLIEILEK	VSEQGLIEILEK	2	VSEQGLIEILEK2	49590.3	86252.8	82267.2
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	VSESDSNEGSSFPSPHK	VSESDSNEGSSFPSPHK	2	VSESDSNEGSSFPSPHK2	82170.2	65066.6	60916.9
D3ZIE4	D3ZIE4	FYB1_RAT	Fyb1	FYN-binding protein 1	1	VSESDSNEGSSFPSPHK	VSESDSNEGSSFPSPHK	3	VSESDSNEGSSFPSPHK3	1.42897e+06	1.49468e+06	1.59161e+06
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	VSESLVR	VSESLVR	2	VSESLVR2	141718	125503	129043
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	VSESVVFTDTNSILR	VSESVVFTDTNSILR	2	VSESVVFTDTNSILR2	49105.2	44699.6	59737
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	VSETEMGSR	VSETEMGSR	2	VSETEMGSR2	237442	191964	209853
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	VSETLQEIYNSDWDGHEDLK	VSETLQEIYNSDWDGHEDLK	3	VSETLQEIYNSDWDGHEDLK3	264183	261684	235990
Q68FR2	Q68FR2	BIN2_RAT	Bin2	Bridging integrator 2	1	VSETLQEIYNSDWDGHEDLK	VSETLQEIYNSDWDGHEDLK	4	VSETLQEIYNSDWDGHEDLK4	6367.32		4140.37
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	VSETRPSTMVVEHPEFLK	VSETRPSTMVVEHPEFLK	3	VSETRPSTMVVEHPEFLK3	154041	122290	136294
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	VSETRPSTMVVEHPEFLK	VSETRPSTMVVEHPEFLK	4	VSETRPSTMVVEHPEFLK4	435048	476477	472444
A0A0G2JZ38	A0A0G2JZ38	A0A0G2JZ38_RAT	Fhod1	Formin homology 2 domain containing 1	1	VSEVKDTVR	VSEVKDTVR	2	VSEVKDTVR2	752.919		
Q68A21	Q68A21	PURB_RAT	Purb	Transcriptional activator protein Pur-beta	1	VSEVKPSYR	VSEVKPSYR	2	VSEVKPSYR2	14030.2	9568.85	14916.9
P86252	P86252	PURA_RAT	Pura	Transcriptional activator protein Pur-alpha	1	VSEVKPTYR	VSEVKPTYR	2	VSEVKPTYR2	33961.7	51172.4	59565.3
A0A0G2K0I6	A0A0G2K0I6	A0A0G2K0I6_RAT	Cdh5	Cadherin 5	1	VSEYFLTALIVDK	VSEYFLTALIVDK	2	VSEYFLTALIVDK2	7806.78	10982.1	12498.1
A0A0G2K0I6	A0A0G2K0I6	A0A0G2K0I6_RAT	Cdh5	Cadherin 5	1	VSEYFLTALIVDKK	VSEYFLTALIVDKK	2	VSEYFLTALIVDKK2		3078.01	4754.22
A0A0G2K0I6	A0A0G2K0I6	A0A0G2K0I6_RAT	Cdh5	Cadherin 5	1	VSEYFLTALIVDKK	VSEYFLTALIVDKK	3	VSEYFLTALIVDKK3	13820.4	12969.4	15261.6
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	VSFAGDAIPK	VSFAGDAIPK	2	VSFAGDAIPK2	14999.1	8194.41	9726.91
Q498S0	Q498S0	Q498S0_RAT	Chst12	Carbohydrate sulfotransferase	1	VSFANFIQYLLDPHTEK	VSFANFIQYLLDPHTEK	3	VSFANFIQYLLDPHTEK3	4948.18		
Q2LC84	A1L1I3;Q2LC84	NUMB_RAT	Numb	Protein numb homolog	0	VSFCAPDR	VSFC(UniMod:4)APDR	2	VSFC(UniMod:4)APDR2	32657.1	29285.6	19062.3
B2RYF6	B2RYF6	B2RYF6_RAT	Clptm1	CLPTM1 regulator of GABA type A receptor forward trafficking	1	VSFCPLSLWR	VSFC(UniMod:4)PLSLWR	2	VSFC(UniMod:4)PLSLWR2	28162.2	22095.5	24192.4
A0A8I5Y1J2	A0A8I5Y1J2	A0A8I5Y1J2_RAT	ENSRNOG00000067128	Peptidyl-prolyl cis-trans isomerase	1	VSFELFADK	VSFELFADK	2	VSFELFADK2	12853.3	2004.17	2983.11
D4A7N1	D4A7N1	MIC25_RAT	Chchd6	MICOS complex subunit Mic25	1	VSFEMDEEER	VSFEMDEEER	2	VSFEMDEEER2	4057.94		3061.81
Q9R010	Q9R010	CIB1_RAT	Cib1	Calcium and integrin-binding protein 1	1	VSFEQILSLPELK	VSFEQILSLPELK	2	VSFEQILSLPELK2	39887.4	51883	36075.9
Q9R010	Q9R010	CIB1_RAT	Cib1	Calcium and integrin-binding protein 1	1	VSFEQILSLPELK	VSFEQILSLPELK	3	VSFEQILSLPELK3	7279.4	3512.96	5657.55
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	VSFFAWHR	VSFFAWHR	2	VSFFAWHR2	629817	624895	569992
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VSFHSLR	VSFHSLR	2	VSFHSLR2	13136.4	11389.2	5085.36
Q9ERR2	Q9ERR2	COMD5_RAT	Commd5	COMM domain-containing protein 5	1	VSFLGSQPSPEVTAVAQLLK	VSFLGSQPSPEVTAVAQLLK	3	VSFLGSQPSPEVTAVAQLLK3	5207.92	1991.34	1631.96
Q99PV2	Q99PV2	Q99PV2_RAT	Stxbp3	Syntaxin binding protein 3	1	VSFLKDE	VSFLKDE	2	VSFLKDE2	54101.7	48523.6	67905.1
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	VSFLWDVGSGVGR	VSFLWDVGSGVGR	2	VSFLWDVGSGVGR2	19886.2	17639.1	25882.5
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	VSFPLETR	VSFPLETR	2	VSFPLETR2	42497.2	28843.8	31281.2
D3ZT64	D3ZT64	D3ZT64_RAT	Atg2a	Autophagy related 2A	1	VSFQHEVYPEESAIAGGLDQELDERPLSR	VSFQHEVYPEESAIAGGLDQELDERPLSR	4	VSFQHEVYPEESAIAGGLDQELDERPLSR4	8807.43		8152.46
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	VSFSCLR	VSFSC(UniMod:4)LR	2	VSFSC(UniMod:4)LR2	122142	138326	143140
Q63042	Q63042	ALR_RAT	Gfer	FAD-linked sulfhydryl oxidase ALR	1	VSFSQWLCR	VSFSQWLC(UniMod:4)R	2	VSFSQWLC(UniMod:4)R2	9416.66	1134.06	6388.16
Q5XIP9	Q5XIP9	TMM43_RAT	Tmem43	Transmembrane protein 43	1	VSFSYAGLSSDDPDLGPAHVVTVIAR	VSFSYAGLSSDDPDLGPAHVVTVIAR	3	VSFSYAGLSSDDPDLGPAHVVTVIAR3	68855.7	71413.8	62198.1
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	VSFTGSVPTGMK	VSFTGSVPTGMK	2	VSFTGSVPTGMK2	94063.6	86709.8	78851.7
B0BN56	B0BN56	RT31_RAT	Mrps31	Small ribosomal subunit protein mS31	1	VSFTQIISNMK	VSFTQIISNMK	2	VSFTQIISNMK2			1886.38
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	VSFYQLSHFLQCK	VSFYQLSHFLQC(UniMod:4)K	2	VSFYQLSHFLQC(UniMod:4)K2	3913.58	5484.73	
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	VSFYQLSHFLQCK	VSFYQLSHFLQC(UniMod:4)K	3	VSFYQLSHFLQC(UniMod:4)K3	19077.8	30230.2	27477.3
D3ZF26	D3ZF26	D3ZF26_RAT	Tnks1bp1	Tankyrase 1 binding protein 1	1	VSGAGLSPSR	VSGAGLSPSR	2	VSGAGLSPSR2	2890.61	5220.44	5966.83
M0R402	M0R402	M0R402_RAT	Tmx3	Thioredoxin-related transmembrane protein 3	1	VSGALIRPLPSQQMFDHVR	VSGALIRPLPSQQMFDHVR	3	VSGALIRPLPSQQMFDHVR3	29735.3	19274.8	22724.7
M0R402	M0R402	M0R402_RAT	Tmx3	Thioredoxin-related transmembrane protein 3	1	VSGALIRPLPSQQMFDHVR	VSGALIRPLPSQQMFDHVR	4	VSGALIRPLPSQQMFDHVR4	28411.3	39170.9	33372.8
D4A482	D4A482	D4A482_RAT	Mfsd2b	Major facilitator superfamily domain containing 2B	1	VSGAVADPVAGFFINK	VSGAVADPVAGFFINK	2	VSGAVADPVAGFFINK2	206503	202955	221874
D4A482	D4A482	D4A482_RAT	Mfsd2b	Major facilitator superfamily domain containing 2B	1	VSGAVADPVAGFFINK	VSGAVADPVAGFFINK	3	VSGAVADPVAGFFINK3	3735.42	4073.88	4953.18
F1MAL5	F1MAL5	F1MAL5_RAT	Irs2	Insulin receptor substrate 2	1	VSGDGAQDLDR	VSGDGAQDLDR	2	VSGDGAQDLDR2	2452.27	1375.94	3712.89
Q8VHC1	Q8VHC1	Q8VHC1_RAT	Cst6	Cystatin E/M	1	VSGDHVDLTTCPLAAGVQQEK	VSGDHVDLTTC(UniMod:4)PLAAGVQQEK	3	VSGDHVDLTTC(UniMod:4)PLAAGVQQEK3	21780.9	24162.7	27821.2
Q5BK06	Q5BK06	CCDB1_RAT	Ccndbp1	Cyclin-D1-binding protein 1	1	VSGEATVLTTLFSK	VSGEATVLTTLFSK	2	VSGEATVLTTLFSK2	7796.66	2347.13	2383.86
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	VSGEDPYPHK	VSGEDPYPHK	2	VSGEDPYPHK2	8372.99	5028.38	7077.53
Q6IE52	Q6IE52	MUG2_RAT	Mug2	Murinoglobulin-2	1	VSGEGCVYAQTTLR	VSGEGC(UniMod:4)VYAQTTLR	2	VSGEGC(UniMod:4)VYAQTTLR2	111563	114453	103038
Q6IE52	Q6IE52	MUG2_RAT	Mug2	Murinoglobulin-2	1	VSGEGCVYAQTTLR	VSGEGC(UniMod:4)VYAQTTLR	3	VSGEGC(UniMod:4)VYAQTTLR3	3717.77	3784.15	5227.37
P30337	P30337;A0A8I6AP97	CHIN_RAT	Chn1	N-chimaerin	0	VSGFSDLIEDVK	VSGFSDLIEDVK	2	VSGFSDLIEDVK2	5603.05	2905.72	1299.17
Q03070	Q03070	CHIO_RAT	Chn2	Beta-chimaerin	1	VSGFTEHIEDVK	VSGFTEHIEDVK	3	VSGFTEHIEDVK3	10549.5	12853.3	
O70257	O70257	STX7_RAT	Stx7	Syntaxin-7	1	VSGGFPEDSSK	VSGGFPEDSSK	2	VSGGFPEDSSK2	166408	92636.2	156308
D3ZR49	D3ZR49	D3ZR49_RAT	Man1a2	alpha-1,2-Mannosidase	1	VSGGFSGVK	VSGGFSGVK	2	VSGGFSGVK2	22967.2	27157.9	
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	VSGGLPLMHVR	VSGGLPLMHVR	3	VSGGLPLMHVR3	51400	59677.8	60911.5
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	VSGGPSLEQR	VSGGPSLEQR	2	VSGGPSLEQR2	89774.5	75180.8	69588.6
Q75WE7	Q75WE7	VWA5A_RAT	Vwa5a	von Willebrand factor A domain-containing protein 5A	1	VSGGTAEFITGK	VSGGTAEFITGK	2	VSGGTAEFITGK2	7009.93		8309.2
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	VSGHVITDIVEGK	VSGHVITDIVEGK	2	VSGHVITDIVEGK2	4957.93	932.89	
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	VSGHVITDIVEGK	VSGHVITDIVEGK	3	VSGHVITDIVEGK3	15681.2	17238.7	18968.1
Q68FW7	Q68FW7	SYTM_RAT	Tars2	Threonine--tRNA ligase, mitochondrial	1	VSGISFPK	VSGISFPK	2	VSGISFPK2	11926.1	14357.2	7959.92
Q5RJS3	Q5RJS3	Q5RJS3_RAT	Ciao2a	Cytosolic iron-sulfur assembly component 2A	1	VSGLLSWTLSR	VSGLLSWTLSR	2	VSGLLSWTLSR2	18748.2	6197.42	14625.4
P83888	P83888	TBG1_RAT	Tubg1	Tubulin gamma-1 chain	1	VSGLMMANHTSISSLFER	VSGLMMANHTSISSLFER	3	VSGLMMANHTSISSLFER3	11258.3	9609.57	10774.4
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VSGLVDK	VSGLVDK	1	VSGLVDK1	110872	97186.9	99475.8
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VSGLVDKVDVGK	VSGLVDKVDVGK	2	VSGLVDKVDVGK2	2721.92		2134
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VSGLVDKVDVGK	VSGLVDKVDVGK	3	VSGLVDKVDVGK3	30459	34304.7	35415.4
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VSGLVDKVDVGKDQEFTVK	VSGLVDKVDVGKDQEFTVK	3	VSGLVDKVDVGKDQEFTVK3	26370.5	34164.3	27362.4
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VSGLVDKVDVGKDQEFTVK	VSGLVDKVDVGKDQEFTVK	4	VSGLVDKVDVGKDQEFTVK4	94694	122863	112578
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	VSGPNGLCPTGFER	VSGPNGLC(UniMod:4)PTGFER	2	VSGPNGLC(UniMod:4)PTGFER2	90345.7	104525	116040
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	VSGPSSDCGSHGQASITTDDGVIFQFK	VSGPSSDC(UniMod:4)GSHGQASITTDDGVIFQFK	3	VSGPSSDC(UniMod:4)GSHGQASITTDDGVIFQFK3	2902.72	2926.35	
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	VSGPWEEANSEALAR	VSGPWEEANSEALAR	2	VSGPWEEANSEALAR2	5842.98	6053.36	7534.98
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	VSGQCCEEWVCDEDSIK	VSGQC(UniMod:4)C(UniMod:4)EEWVC(UniMod:4)DEDSIK	3	VSGQC(UniMod:4)C(UniMod:4)EEWVC(UniMod:4)DEDSIK3	2655.35	8994.65	8652.74
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VSGQGLHEGHTFEPAEFIIDTR	VSGQGLHEGHTFEPAEFIIDTR	3	VSGQGLHEGHTFEPAEFIIDTR3	175841	142887	128152
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VSGQGLHEGHTFEPAEFIIDTR	VSGQGLHEGHTFEPAEFIIDTR	4	VSGQGLHEGHTFEPAEFIIDTR4	473739	522574	527456
P62198	P62198	PRS8_RAT	Psmc5	26S proteasome regulatory subunit 8	1	VSGSELVQK	VSGSELVQK	2	VSGSELVQK2	158470	152127	141943
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	VSGSGCVYLQTSLK	VSGSGC(UniMod:4)VYLQTSLK	2	VSGSGC(UniMod:4)VYLQTSLK2	376028	294781	268765
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	VSGSGCVYLQTSLK	VSGSGC(UniMod:4)VYLQTSLK	3	VSGSGC(UniMod:4)VYLQTSLK3	35988.7	25643.2	18614.6
P84850	P84850	D2HDH_RAT	D2hgdh	D-2-hydroxyglutarate dehydrogenase, mitochondrial	1	VSGSPEVMLTPER	VSGSPEVMLTPER	2	VSGSPEVMLTPER2	12984.4	16340.3	8645.76
P60522	P60522	GBRL2_RAT	Gabarapl2	Gamma-aminobutyric acid receptor-associated protein-like 2	1	VSGSQIVDIDK	VSGSQIVDIDK	2	VSGSQIVDIDK2	23892.3	23405.9	27626.3
P60522	P60522	GBRL2_RAT	Gabarapl2	Gamma-aminobutyric acid receptor-associated protein-like 2	1	VSGSQIVDIDKR	VSGSQIVDIDKR	3	VSGSQIVDIDKR3	5929.96	6978.89	8811.17
D4A208	D4A208;F1M287	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	0	VSGSQVEVNDIK	VSGSQVEVNDIK	2	VSGSQVEVNDIK2	19557.6	20576.2	16128.4
D3ZPW6	D3ZPW6	D3ZPW6_RAT	Lage3	Uncharacterized protein	1	VSGSVLEV	VSGSVLEV	1	VSGSVLEV1	8547.27		2669.12
P81155	A0A8I5ZYN2;P81155	VDAC2_RAT	Vdac2	Voltage-dependent anion-selective channel protein 2	0	VSGTLETK	VSGTLETK	1	VSGTLETK1	3084	3121.69	2052.98
P81155	A0A8I5ZYN2;P81155	VDAC2_RAT	Vdac2	Voltage-dependent anion-selective channel protein 2	0	VSGTLETK	VSGTLETK	2	VSGTLETK2	1.35277e+06	1.33142e+06	1.43789e+06
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	VSGVATDIQALK	VSGVATDIQALK	2	VSGVATDIQALK2	41844.8	41457.5	46305.7
Q5XIT9	Q5XIT9	MCCB_RAT	Mccc2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	1	VSGVECMIVANDATVK	VSGVEC(UniMod:4)MIVANDATVK	2	VSGVEC(UniMod:4)MIVANDATVK2	10628.3	9316.86	12459.1
Q5XIT9	Q5XIT9	MCCB_RAT	Mccc2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	1	VSGVECMIVANDATVK	VSGVEC(UniMod:4)MIVANDATVK	3	VSGVEC(UniMod:4)MIVANDATVK3	3665.27		
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	VSGVGIDYAR	VSGVGIDYAR	2	VSGVGIDYAR2	130626	138211	163438
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	VSGVMTQGASR	VSGVMTQGASR	2	VSGVMTQGASR2	125825	131743	147786
P0C5E3	P0C5E3	PALLD_RAT	Palld	Palladin (Fragment)	1	VSGVPPPQIFWK	VSGVPPPQIFWK	2	VSGVPPPQIFWK2	17618.7	19073	29922.5
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	VSGVSYSGVAPGVPLVSMAPK	VSGVSYSGVAPGVPLVSMAPK	3	VSGVSYSGVAPGVPLVSMAPK3	7432.9		9278.77
D3ZEN0	D3ZEN0	MILK2_RAT	Micall2	MICAL-like protein 2	1	VSGVVDNPAQESSR	VSGVVDNPAQESSR	2	VSGVVDNPAQESSR2	24239.3	22716.1	16695.5
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	VSGWGQLLDR	VSGWGQLLDR	2	VSGWGQLLDR2	643861	757749	689117
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	VSHDALPER	VSHDALPER	2	VSHDALPER2	5039.57	3461.55	10881.6
A0A8I6AM26	A0A8I6AM26	A0A8I6AM26_RAT	Srrt	Arsenite-resistance protein 2	1	VSHGEVLEWQK	VSHGEVLEWQK	3	VSHGEVLEWQK3		963.282	
D3ZMV1	D3ZMV1	D3ZMV1_RAT	Sla2	Src-like-adaptor 2	1	VSHGWLYEGLSR	VSHGWLYEGLSR	3	VSHGWLYEGLSR3	78107.3	79885.1	94298.6
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	VSHITFAHEVGHNFGSPHDSGTECTPGESK	VSHITFAHEVGHNFGSPHDSGTEC(UniMod:4)TPGESK	4	VSHITFAHEVGHNFGSPHDSGTEC(UniMod:4)TPGESK4	13023.1	7455.92	8987.54
Q01986	Q01986	MP2K1_RAT	Map2k1	Dual specificity mitogen-activated protein kinase kinase 1	1	VSHKPSGLVMAR	VSHKPSGLVMAR	2	VSHKPSGLVMAR2	10897.6		4168.61
Q01986	Q01986	MP2K1_RAT	Map2k1	Dual specificity mitogen-activated protein kinase kinase 1	1	VSHKPSGLVMAR	VSHKPSGLVMAR	3	VSHKPSGLVMAR3	72822.1	66392.3	66473.5
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	VSHLEQCFSELSNMAAGR	VSHLEQC(UniMod:4)FSELSNMAAGR	3	VSHLEQC(UniMod:4)FSELSNMAAGR3	114053		81994
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VSHLLGINVTDFTR	VSHLLGINVTDFTR	2	VSHLLGINVTDFTR2	1.9326e+06	2.2169e+06	2.05116e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VSHLLGINVTDFTR	VSHLLGINVTDFTR	3	VSHLLGINVTDFTR3	233681	265830	191406
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VSHLLGINVTDFTR	VSHLLGINVTDFTR	4	VSHLLGINVTDFTR4	2310.48	5703.33	1298.4
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VSHLLGINVTDFTRGILTPR	VSHLLGINVTDFTRGILTPR	4	VSHLLGINVTDFTRGILTPR4	5775.06	4330.99	3518.09
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	VSHLYGFGLMDAEAMVMEAEK	VSHLYGFGLMDAEAMVMEAEK	3	VSHLYGFGLMDAEAMVMEAEK3	70670.9	48096.6	49337
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	VSHPLLQQQYQLHR	VSHPLLQQQYQLHR	4	VSHPLLQQQYQLHR4	9983.93	2289.46	7929.15
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	VSHQAGDCWLIR	VSHQAGDC(UniMod:4)WLIR	2	VSHQAGDC(UniMod:4)WLIR2	24352.6	29317.3	27851.5
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	VSHQAGDCWLIR	VSHQAGDC(UniMod:4)WLIR	3	VSHQAGDC(UniMod:4)WLIR3	316447	314137	308625
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	VSHQVAYGLHELLK	VSHQVAYGLHELLK	3	VSHQVAYGLHELLK3	5067.67	8028.28	5628.19
F1M8X9	F1M8X9	F1M8X9_RAT	Gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1	1	VSHQVAYGLHELLK	VSHQVAYGLHELLK	4	VSHQVAYGLHELLK4	2200.6	2915.97	7737.27
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	VSHVLAALQAGNR	VSHVLAALQAGNR	2	VSHVLAALQAGNR2	31063.8	27512.5	23859.2
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	VSHVLAALQAGNR	VSHVLAALQAGNR	3	VSHVLAALQAGNR3	249563	255438	233757
P16617	Q5XIV1;P16617;M0R6Y8	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	0	VSHVSTGGGASLELLEGK	VSHVSTGGGASLELLEGK	2	VSHVSTGGGASLELLEGK2	5353.33	7220.31	8770.5
P16617	Q5XIV1;P16617;M0R6Y8	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	0	VSHVSTGGGASLELLEGK	VSHVSTGGGASLELLEGK	3	VSHVSTGGGASLELLEGK3	96518.4	93153.4	102055
Q5U2U2	Q5U2U2	CRKL_RAT	Crkl	Crk-like protein	1	VSHYIINSLPNR	VSHYIINSLPNR	3	VSHYIINSLPNR3	22855.8	23233.8	12749.7
Q5U2U2	Q5U2U2	CRKL_RAT	Crkl	Crk-like protein	1	VSHYIINSLPNRR	VSHYIINSLPNRR	3	VSHYIINSLPNRR3	12727.1	7886.27	10296.8
Q5U2U2	Q5U2U2	CRKL_RAT	Crkl	Crk-like protein	1	VSHYIINSLPNRR	VSHYIINSLPNRR	4	VSHYIINSLPNRR4	39588.8	34123.4	55346.2
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	VSIDGVEWSDIK	VSIDGVEWSDIK	2	VSIDGVEWSDIK2	33609.2	41939.8	50048.5
A0A8I6AL43	A0A8I6AL43	A0A8I6AL43_RAT	Ate1	Arginyl-tRNA--protein transferase 1	1	VSIESEEKEKEK	VSIESEEKEKEK	3	VSIESEEKEKEK3	10821.1	14418.8	15179.8
A0A8I5ZQ24	A0A8I5ZQ24	A0A8I5ZQ24_RAT	Atp6v1h	V-type proton ATPase subunit H	1	VSIFFDYAK	VSIFFDYAK	2	VSIFFDYAK2	10266.2	11352.5	5744.25
Q4V892	Q4V892	SIGIR_RAT	Sigirr	Single Ig IL-1-related receptor	1	VSIGEGHASEMDVSDLGSR	VSIGEGHASEMDVSDLGSR	3	VSIGEGHASEMDVSDLGSR3	4231.31	3762.66	8281.34
D3ZYR1	D3ZYR1	FCHO2_RAT	Fcho2	F-BAR domain only protein 2	1	VSIGNITLSPAVSR	VSIGNITLSPAVSR	2	VSIGNITLSPAVSR2	38818.4	47289.5	32219.8
P05508	P05508	NU4M_RAT	Mtnd4	NADH-ubiquinone oxidoreductase chain 4	1	VSIILDPLTK	VSIILDPLTK	2	VSIILDPLTK2	19670.9	7469.42	10166.5
Q7TNI4	Q7TNI4	I22R2_RAT	Il22ra2	Interleukin-22 receptor subunit alpha-2	1	VSIINNSLEK	VSIINNSLEK	2	VSIINNSLEK2	8025	5012.92	9064.13
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	VSIIPPIALNSTDSDGFCR	VSIIPPIALNSTDSDGFC(UniMod:4)R	3	VSIIPPIALNSTDSDGFC(UniMod:4)R3	44692.2	39550.2	61863.4
P09456	P09456	KAP0_RAT	Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit	1	VSILESLDK	VSILESLDK	2	VSILESLDK2	90823.7	67440.9	75891.6
P09456	P09456	KAP0_RAT	Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit	1	VSILESLDKWER	VSILESLDKWER	2	VSILESLDKWER2	7078.17	4641.13	3382.42
P09456	P09456	KAP0_RAT	Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit	1	VSILESLDKWER	VSILESLDKWER	3	VSILESLDKWER3	67794.6	90445.1	74904.3
P62882	P62882	GNB5_RAT	Gnb5	Guanine nucleotide-binding protein subunit beta-5	1	VSILFGHENR	VSILFGHENR	3	VSILFGHENR3	9049.51	3420.15	6482.79
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	VSIPTDLIASSGEIIK	VSIPTDLIASSGEIIK	2	VSIPTDLIASSGEIIK2	24188.5	10746.7	27325
A0A8I6GIH3	A0A8I6GIH3	A0A8I6GIH3_RAT	Pigt	Phosphatidylinositol glycan anchor biosynthesis, class T	1	VSIQFER	VSIQFER	2	VSIQFER2	5011.91	2398.99	6313.92
F1M9Z5	F1M9Z5	F1M9Z5_RAT	Cd300le	Cd300 molecule-like family member E	1	VSIRDDQTNFIFTVTMEDLR	VSIRDDQTNFIFTVTMEDLR	3	VSIRDDQTNFIFTVTMEDLR3	60425.5	35364.5	63008.3
A0A8I5ZZZ6	A0A8I5ZZZ6	A0A8I5ZZZ6_RAT	Riok3	Serine/threonine-protein kinase RIO3	1	VSISFENYR	VSISFENYR	2	VSISFENYR2	79222	86615.8	97163.9
D4ACA1	D4ACA1	D4ACA1_RAT	Nxpe3	Neurexophilin and PC-esterase domain family, member 3	1	VSISLVHPSEGIR	VSISLVHPSEGIR	3	VSISLVHPSEGIR3	3734.03		6884.68
A0A8I5ZY29	A0A8I5ZY29	A0A8I5ZY29_RAT	Usp14	Ubiquitin carboxyl-terminal hydrolase	1	VSIVTPEDILR	VSIVTPEDILR	2	VSIVTPEDILR2	43148.8	35053.1	45769.4
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	VSIYGVAR	VSIYGVAR	2	VSIYGVAR2	774054	937786	829511
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	VSIYGVIQGYR	VSIYGVIQGYR	2	VSIYGVIQGYR2	369529	407443	383340
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	VSIYGVIQGYR	VSIYGVIQGYR	3	VSIYGVIQGYR3	10845.9	7005.66	6868.21
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	VSKEQDHIIIIPR	VSKEQDHIIIIPR	4	VSKEQDHIIIIPR4	1466.39	5595.81	4784.49
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	VSLAEDDDR	VSLAEDDDR	2	VSLAEDDDR2	15210.6	19842.6	15574.8
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	VSLAEDDDRLIIR	VSLAEDDDRLIIR	3	VSLAEDDDRLIIR3	240436	296031	220528
Q06647	Q06647	ATPO_RAT	Atp5po	ATP synthase subunit O, mitochondrial	1	VSLAVLNPYIK	VSLAVLNPYIK	2	VSLAVLNPYIK2	563520	611183	609028
D4A7D3	D4A7D3	D4A7D3_RAT	Tbk1	TANK-binding kinase 1	1	VSLDAAELGEISDIHTK	VSLDAAELGEISDIHTK	3	VSLDAAELGEISDIHTK3	6225.69	1587.63	4109.13
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	VSLDAAGNEGSWFYIHPFWK	VSLDAAGNEGSWFYIHPFWK	3	VSLDAAGNEGSWFYIHPFWK3		6348.78	10792.1
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VSLDDVNDNPPR	VSLDDVNDNPPR	2	VSLDDVNDNPPR2	104410	97129.9	89794.4
A0A8I5ZQG6	A0A8I5ZQG6	A0A8I5ZQG6_RAT	Sez6l2	Seizure related 6 homolog like 2	1	VSLDEDNDR	VSLDEDNDR	2	VSLDEDNDR2	30141.8	22787.1	24242.9
A0A8I5ZQG6	A0A8I5ZQG6	A0A8I5ZQG6_RAT	Sez6l2	Seizure related 6 homolog like 2	1	VSLDEDNDRLMVR	VSLDEDNDRLMVR	3	VSLDEDNDRLMVR3	20794.5	25033.4	23628.8
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	VSLDPHAQVAVGILR	VSLDPHAQVAVGILR	3	VSLDPHAQVAVGILR3	10578.5	8668.56	6889.6
P42930	P42930	HSPB1_RAT	Hspb1	Heat shock protein beta-1	1	VSLDVNHFAPEELTVK	VSLDVNHFAPEELTVK	3	VSLDVNHFAPEELTVK3			4053.1
O35824	O35824	DNJA2_RAT	Dnaja2	DnaJ homolog subfamily A member 2	1	VSLEDLYNGK	VSLEDLYNGK	2	VSLEDLYNGK2	69521.3	80237.8	72151.3
P28037	A0A8I5ZRH3;P28037	AL1L1_RAT	Aldh1l1	Cytosolic 10-formyltetrahydrofolate dehydrogenase	0	VSLELGGK	VSLELGGK	1	VSLELGGK1	5295.21	6064.05	2639.38
O88902	O88902	PTN23_RAT	Ptpn23	Tyrosine-protein phosphatase non-receptor type 23 (Fragment)	1	VSLEQQLR	VSLEQQLR	2	VSLEQQLR2	11305	16773.1	16497.2
A0A0G2K0G9	A0A0G2K0G9	A0A0G2K0G9_RAT	Rin3	Ras and Rab interactor 3	1	VSLESQNVGTSTDRDR	VSLESQNVGTSTDRDR	3	VSLESQNVGTSTDRDR3	48542.2	37959.7	46756
Q63186	Q63186	EI2BD_RAT	Eif2b4	Translation initiation factor eIF-2B subunit delta	1	VSLFSHLPQYSR	VSLFSHLPQYSR	3	VSLFSHLPQYSR3	41826.8	42339.6	37910.3
Q5BJY6	Q5BJY6	NAGA_RAT	Amdhd2	N-acetylglucosamine-6-phosphate deacetylase	1	VSLGHSVADLR	VSLGHSVADLR	3	VSLGHSVADLR3	18106.4	5068.1	4614.03
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	VSLLDDTVYECVVEK	VSLLDDTVYEC(UniMod:4)VVEK	2	VSLLDDTVYEC(UniMod:4)VVEK2	86580.4	103026	76304.8
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	VSLLDDTVYECVVEK	VSLLDDTVYEC(UniMod:4)VVEK	3	VSLLDDTVYEC(UniMod:4)VVEK3	13596.4	21271	13963.4
Q6P691	Q6P691	Q6P691_RAT	C2cd2	C2 calcium-dependent domain containing 2	1	VSLLNHPGASGISHMCVAQLNEPAQR	VSLLNHPGASGISHMC(UniMod:4)VAQLNEPAQR	3	VSLLNHPGASGISHMC(UniMod:4)VAQLNEPAQR3	1930.66	2386.13	2229.78
Q6P691	Q6P691	Q6P691_RAT	C2cd2	C2 calcium-dependent domain containing 2	1	VSLLNHPGASGISHMCVAQLNEPAQR	VSLLNHPGASGISHMC(UniMod:4)VAQLNEPAQR	4	VSLLNHPGASGISHMC(UniMod:4)VAQLNEPAQR4	37155.5	27683.6	30049.4
Q811U3	Q811U3	RB6I2_RAT	Erc1	ELKS/Rab6-interacting/CAST family member 1	1	VSLLQGDLSEK	VSLLQGDLSEK	2	VSLLQGDLSEK2	20411.6	18425.7	14848.8
P17256	P17256	KIME_RAT	Mvk	Mevalonate kinase	1	VSLNLPNVGIK	VSLNLPNVGIK	2	VSLNLPNVGIK2	7553.89		9947.82
O35828	O35828	CORO7_RAT	Coro7	Coronin-7	1	VSLNPAHRPHPR	VSLNPAHRPHPR	3	VSLNPAHRPHPR3	140625	149756	119593
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	VSLPNYPAIPSDATLEIQNLR	VSLPNYPAIPSDATLEIQNLR	3	VSLPNYPAIPSDATLEIQNLR3	5858.55	8730.66	5661.15
Q5XIS7	Q5XIS7	UBAP1_RAT	Ubap1	Ubiquitin-associated protein 1	1	VSLPPIPTVSNIK	VSLPPIPTVSNIK	2	VSLPPIPTVSNIK2		17946.6	
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	VSLPVNDR	VSLPVNDR	2	VSLPVNDR2	10318.4	26612.7	29762.1
Q5BK48	Q5BK48	TTC5_RAT	Ttc5	Tetratricopeptide repeat protein 5	1	VSLQNLSMVLR	VSLQNLSMVLR	2	VSLQNLSMVLR2	2203.29		2693.88
A0A8I6AT07	M0R4Q5;A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	0	VSLSEANVQR	VSLSEANVQR	2	VSLSEANVQR2	14303	28615.5	31810.3
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	VSLTCMVTSFYPASISVEWER	VSLTC(UniMod:4)MVTSFYPASISVEWER	3	VSLTC(UniMod:4)MVTSFYPASISVEWER3	10540.4	19997.4	18838.4
D3ZM20	D3ZM20	D3ZM20_RAT	Kif13a	Kinesin family member 13A	1	VSLVDLAGSER	VSLVDLAGSER	2	VSLVDLAGSER2		6482.91	
Q7M733	Q7M733	HPS6_RAT	Hps6	BLOC-2 complex member HPS6	1	VSLVQCHGGTR	VSLVQC(UniMod:4)HGGTR	3	VSLVQC(UniMod:4)HGGTR3	4277.34	7334.66	6087.32
D3ZD03	D3ZD03	D3ZD03_RAT	Tyk2	Tyrosine-protein kinase	1	VSLYCYDPNNDGTGEMVAVK	VSLYC(UniMod:4)YDPNNDGTGEMVAVK	3	VSLYC(UniMod:4)YDPNNDGTGEMVAVK3	1715.16	4211.09	2036.93
Q9WUD2	Q9WUD2	TRPV2_RAT	Trpv2	Transient receptor potential cation channel subfamily V member 2	1	VSLYDLSSVDSWEK	VSLYDLSSVDSWEK	2	VSLYDLSSVDSWEK2	15013.7	8708.52	12101
F1M332	F1M332	F1M332_RAT	Arhgap28	Rho GTPase activating protein 28	1	VSMAIQLNSQTK	VSMAIQLNSQTK	2	VSMAIQLNSQTK2	3545.96		5734.11
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	VSMAIQLTEELK	VSMAIQLTEELK	2	VSMAIQLTEELK2	4627.5	6327.47	4641.25
A0A0U1RRS5	A0A0U1RRS5	A0A0U1RRS5_RAT	Smg7	Nonsense-mediated mRNA decay factor	1	VSMDWLR	VSMDWLR	2	VSMDWLR2	14087.6	7211.72	6885.83
O88321	O88321	O88321_RAT	Psmd4	26S proteasome non-ATPase regulatory subunit 4	1	VSMEEQR	VSMEEQR	2	VSMEEQR2		170140	
Q9EPH1	Q9EPH1	A1BG_RAT	A1bg	Alpha-1B-glycoprotein	1	VSMELVR	VSMELVR	2	VSMELVR2	48581.5	42750	44843.5
Q5XI39	Q5XI39	Q5XI39_RAT	Cryzl1	Crystallin zeta like 1	1	VSMEVVQK	VSMEVVQK	2	VSMEVVQK2	9947.78	9297.64	7573.35
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	VSMILQSPAFCEELESMIQEQFKK	VSMILQSPAFC(UniMod:4)EELESMIQEQFKK	3	VSMILQSPAFC(UniMod:4)EELESMIQEQFKK3	5730.4	2367.72	
D3ZT64	D3ZT64	D3ZT64_RAT	Atg2a	Autophagy related 2A	1	VSMMPLR	VSMMPLR	2	VSMMPLR2	10713.6	15759.4	16338.7
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	VSMMQTK	VSMMQTK	1	VSMMQTK1	216118	240791	179480
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	VSMMQTK	VSMMQTK	2	VSMMQTK2	1.75211e+07	1.60198e+07	1.39477e+07
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	VSMTTNTTDSVSDEEK	VSMTTNTTDSVSDEEK	2	VSMTTNTTDSVSDEEK2	1609.82	1305.86	771.208
Q4FZT2	Q4FZT2	PPME1_RAT	Ppme1	Protein phosphatase methylesterase 1	1	VSMVGQVK	VSMVGQVK	2	VSMVGQVK2	45482.6	44655.1	48788.9
E9PU15	E9PU15	E9PU15_RAT	Dicer1	Endoribonuclease Dicer	1	VSNCNLYR	VSNC(UniMod:4)NLYR	2	VSNC(UniMod:4)NLYR2	3212.54	3307.75	3733.76
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	VSNEDPFNPTISSSASSVVIPK	VSNEDPFNPTISSSASSVVIPK	3	VSNEDPFNPTISSSASSVVIPK3	12900.3	6584.39	10026.7
A0A8I5ZP70	A0A8I5ZP70	A0A8I5ZP70_RAT	Tom1l2	Target of myb1 like 2 membrane trafficking protein	1	VSNEEVTEELLHVNDDLNNVFLR	VSNEEVTEELLHVNDDLNNVFLR	3	VSNEEVTEELLHVNDDLNNVFLR3	33078.5	39344.5	42108
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	VSNLENEAR	VSNLENEAR	2	VSNLENEAR2	62575.8	154887	81118.3
Q64350	Q64350	EI2BE_RAT	Eif2b5	Translation initiation factor eIF-2B subunit epsilon	1	VSNLHMYSAVCADVIR	VSNLHMYSAVC(UniMod:4)ADVIR	3	VSNLHMYSAVC(UniMod:4)ADVIR3		6962.4	8002.71
P04904	P04904;P46418	GSTA3_RAT	Gsta3	Glutathione S-transferase alpha-3	0	VSNLPTVK	VSNLPTVK	2	VSNLPTVK2	35781.2	26613.9	24839.2
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	VSNLVSYNEIWMK	VSNLVSYNEIWMK	2	VSNLVSYNEIWMK2		9566.29	6569.69
Q3MID3	Q3MID3	ARFG2_RAT	Arfgap2	ADP-ribosylation factor GTPase-activating protein 2	1	VSNQSFTEIER	VSNQSFTEIER	2	VSNQSFTEIER2	8903.09	7826.23	5552.96
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	VSNQVLQK	VSNQVLQK	2	VSNQVLQK2	54758.2	75020.3	103226
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	VSNSGGSMSVSLVADENPFAQSALR	VSNSGGSMSVSLVADENPFAQSALR	3	VSNSGGSMSVSLVADENPFAQSALR3	454155	494150	504777
A0A0G2K712	A0A0G2K712	A0A0G2K712_RAT	Tbc1d5	TBC1 domain family, member 5	1	VSNSLINFGR	VSNSLINFGR	2	VSNSLINFGR2	4949.77	3519.23	8021.34
Q05754	Q05754	DOPO_RAT	Dbh	Dopamine beta-hydroxylase	1	VSNSLSLLFK	VSNSLSLLFK	2	VSNSLSLLFK2	4180.64	3950.31	6161.88
Q6PCU2	D3ZJ78;Q6PCU2	VATE1_RAT	Atp6v1e1	V-type proton ATPase subunit E 1	0	VSNTLESR	VSNTLESR	2	VSNTLESR2	52733.3	91778.1	79790.1
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	VSNYVDWINDR	VSNYVDWINDR	2	VSNYVDWINDR2	428555	397935	361900
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	VSNYVDWINDR	VSNYVDWINDR	3	VSNYVDWINDR3	8577.53	9517.97	7032.4
A0A0G2JZS1	A0A0G2JZS1	A0A0G2JZS1_RAT	Kpna6	Importin subunit alpha	1	VSPCLPVLSR	VSPC(UniMod:4)LPVLSR	2	VSPC(UniMod:4)LPVLSR2	109755	148784	141241
P62882	P62882	GNB5_RAT	Gnb5	Guanine nucleotide-binding protein subunit beta-5	1	VSPDGTAFCSGSWDHTLR	VSPDGTAFC(UniMod:4)SGSWDHTLR	3	VSPDGTAFC(UniMod:4)SGSWDHTLR3	3762.56	4269	2836.11
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VSPDMAIFITMNPGYAGR	VSPDMAIFITMNPGYAGR	2	VSPDMAIFITMNPGYAGR2	38706.2	46062.5	36441.7
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VSPDMAIFITMNPGYAGR	VSPDMAIFITMNPGYAGR	3	VSPDMAIFITMNPGYAGR3	65758.3	62964.7	67785
Q5XIC4	Q5XIC4	SPG21_RAT	Spg21	Maspardin	1	VSPDYNWFR	VSPDYNWFR	2	VSPDYNWFR2	60707.3	73405.9	65914.7
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	VSPEEAIK	VSPEEAIK	2	VSPEEAIK2	536245	493490	513066
G3V6R7	G3V6R7	G3V6R7_RAT	Oxsm	3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial	1	VSPFFVPK	VSPFFVPK	2	VSPFFVPK2	8148.45	3519.12	11309.8
Q9EPI0	Q9EPI0	XYLT2_RAT	Xylt2	Xylosyltransferase 2	1	VSPGIQWEEVR	VSPGIQWEEVR	2	VSPGIQWEEVR2	199340	337714	244916
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	VSPLLPATHVTMAK	VSPLLPATHVTMAK	3	VSPLLPATHVTMAK3	61981.2	57068.1	46154.6
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	VSPLSFGR	VSPLSFGR	2	VSPLSFGR2	3.50058e+06	4.45265e+06	3.65495e+06
A0A8I5ZNC2	A0A8I5ZNC2	A0A8I5ZNC2_RAT	Tmed8	Transmembrane p24 trafficking protein family member 8	1	VSPPLMAPPCVWTFAK	VSPPLMAPPC(UniMod:4)VWTFAK	2	VSPPLMAPPC(UniMod:4)VWTFAK2	34816.8	38918.4	60918.7
A0A8I5ZNC2	A0A8I5ZNC2	A0A8I5ZNC2_RAT	Tmed8	Transmembrane p24 trafficking protein family member 8	1	VSPPLMAPPCVWTFAK	VSPPLMAPPC(UniMod:4)VWTFAK	3	VSPPLMAPPC(UniMod:4)VWTFAK3		3345.46	9405.2
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	VSPQDANSLMANGTLTR	VSPQDANSLMANGTLTR	2	VSPQDANSLMANGTLTR2	6630.93	5756.11	
D3ZKQ4	D3ZKQ4	D3ZKQ4_RAT	Rabl6	RAB, member RAS oncogene family-like 6	1	VSPQQCSEPETK	VSPQQC(UniMod:4)SEPETK	2	VSPQQC(UniMod:4)SEPETK2	62061.7	53496.8	63514
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	VSPSELTAGTPELDTLLTVHLQVCK	VSPSELTAGTPELDTLLTVHLQVC(UniMod:4)K	3	VSPSELTAGTPELDTLLTVHLQVC(UniMod:4)K3		7114.04	6986.78
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	VSPSPSQESLSSSK	VSPSPSQESLSSSK	2	VSPSPSQESLSSSK2	13728.1	17419.5	18031.6
F1LXF1	F1LXF1	BCR_RAT	Bcr	Breakpoint cluster region protein	1	VSPSPTTYR	VSPSPTTYR	2	VSPSPTTYR2	17843.1	15820.7	17174.7
P52873	P52873	PYC_RAT	Pc	Pyruvate carboxylase, mitochondrial	1	VSPSPVDPIVPVVPIGPPPAGFR	VSPSPVDPIVPVVPIGPPPAGFR	3	VSPSPVDPIVPVVPIGPPPAGFR3	4446.5	9090.5	8293.48
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	VSPSSEEK	VSPSSEEK	1	VSPSSEEK1			7941.09
A0A8I6A5U2	A0A8I6A5U2	A0A8I6A5U2_RAT	Dnajb2	DnaJ heat shock protein family (Hsp40) member B2	1	VSPSSEEK	VSPSSEEK	2	VSPSSEEK2			103246
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	VSPVAQMTLTLKPK	VSPVAQMTLTLKPK	2	VSPVAQMTLTLKPK2	24409.3	14779.9	19790
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	VSPVAQMTLTLKPK	VSPVAQMTLTLKPK	3	VSPVAQMTLTLKPK3	130504	95582.7	122205
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	VSPVLPSSSLESPQDEDK	VSPVLPSSSLESPQDEDK	2	VSPVLPSSSLESPQDEDK2	8256.94	7854.49	9472.96
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	VSPVLPSSSLESPQDEDKGENSTK	VSPVLPSSSLESPQDEDKGENSTK	3	VSPVLPSSSLESPQDEDKGENSTK3	76572.2	88241.1	65386.4
D4A7H9	D4A7H9	D4A7H9_RAT	Chmp7	Charged multivesicular body protein 7	1	VSPVNDVDVGVYQLMQSEQLLSQK	VSPVNDVDVGVYQLMQSEQLLSQK	3	VSPVNDVDVGVYQLMQSEQLLSQK3	3346.84	3551.69	
Q5M849	Q5M849	Q5M849_RAT	Ifi35	Interferon-induced protein 35	1	VSPYVSGEIQEAEIK	VSPYVSGEIQEAEIK	2	VSPYVSGEIQEAEIK2	88996.5	92058.3	72849.7
P63219	A0A8L2QRU2;P63219;F2Z3T8	GBG5_RAT	Gng5	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5	0	VSQAAADLK	VSQAAADLK	1	VSQAAADLK1	4441.1	7883.58	5982.11
P63219	A0A8L2QRU2;P63219;F2Z3T8	GBG5_RAT	Gng5	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5	0	VSQAAADLK	VSQAAADLK	2	VSQAAADLK2	402065	414655	385817
D3ZK09	D3ZK09	D3ZK09_RAT	Scyl3	SCY1 like pseudokinase 3	1	VSQATPEFLR	VSQATPEFLR	2	VSQATPEFLR2	16552.6	21350.7	19475.6
E9PT90	E9PT90	E9PT90_RAT	Spart	Spartin	1	VSQFLVDGVCTVANCVGK	VSQFLVDGVC(UniMod:4)TVANC(UniMod:4)VGK	2	VSQFLVDGVC(UniMod:4)TVANC(UniMod:4)VGK2	3362.18	2499.64	
F1M386	F1M386	RPGF2_RAT	Rapgef2	Rap guanine nucleotide exchange factor 2	1	VSQGLQVPAVSLYPSR	VSQGLQVPAVSLYPSR	2	VSQGLQVPAVSLYPSR2	12398.2	11416.8	6868.43
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VSQHGSDAVIETDFGLR	VSQHGSDAVIETDFGLR	2	VSQHGSDAVIETDFGLR2	26219.1	23117.1	33344.4
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VSQHGSDAVIETDFGLR	VSQHGSDAVIETDFGLR	3	VSQHGSDAVIETDFGLR3	1.06508e+06	933359	1.04072e+06
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	VSQLDIQIK	VSQLDIQIK	2	VSQLDIQIK2	13791.3	10916.6	10406.4
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	VSQLYGDLQHLK	VSQLYGDLQHLK	2	VSQLYGDLQHLK2	35087.6	34383.2	23603.9
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	VSQLYGDLQHLK	VSQLYGDLQHLK	3	VSQLYGDLQHLK3	84131.4	107646	107971
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	VSQLYMNQK	VSQLYMNQK	2	VSQLYMNQK2	86871.4	66714.6	58641.9
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	VSQMAQYFEPLTLAAVGAASK	VSQMAQYFEPLTLAAVGAASK	3	VSQMAQYFEPLTLAAVGAASK3	606130	671331	657193
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	VSQMFGDNVQK	VSQMFGDNVQK	2	VSQMFGDNVQK2	44415.6	49512.6	44435.7
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	VSQMFGDNVQK	VSQMFGDNVQK	3	VSQMFGDNVQK3	4052.71	11053.7	4463.67
A0A8I6A538	A0A8I6A538	A0A8I6A538_RAT	Nin	Ninein	1	VSQMSSLER	VSQMSSLER	2	VSQMSSLER2	5995.07	5042.71	5198.18
D3Z8F6	D3Z8F6	D3Z8F6_RAT	Dennd1b	DENN domain containing 1B	1	VSQNQVGQHFTFVLTDMESK	VSQNQVGQHFTFVLTDMESK	3	VSQNQVGQHFTFVLTDMESK3	3117.91		5059.96
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	VSQPIEGHAASFAQFK	VSQPIEGHAASFAQFK	2	VSQPIEGHAASFAQFK2	97467.4	89791.4	90303.8
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	VSQPIEGHAASFAQFK	VSQPIEGHAASFAQFK	3	VSQPIEGHAASFAQFK3	1.00065e+06	1.26853e+06	1.35836e+06
P97697	P97697	IMPA1_RAT	Impa1	Inositol monophosphatase 1	1	VSQQEDITK	VSQQEDITK	2	VSQQEDITK2	18161.8	17112.7	12600.8
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	VSQQILEK	VSQQILEK	2	VSQQILEK2	48289.4	45189.6	55134.1
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	VSQQPPVPPQR	VSQQPPVPPQR	2	VSQQPPVPPQR2	15328.6	11126.1	8377.54
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	VSQQPPVPPQRPMAALPPLPTGR	VSQQPPVPPQRPMAALPPLPTGR	3	VSQQPPVPPQRPMAALPPLPTGR3	963204	1.07314e+06	1.13388e+06
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	VSQQPPVPPQRPMAALPPLPTGR	VSQQPPVPPQRPMAALPPLPTGR	4	VSQQPPVPPQRPMAALPPLPTGR4	65589.7	79880.4	71135.6
M0R715	M0R715	M0R715_RAT	Pnpla6	Patatin-like phospholipase domain containing 6	1	VSQSTSSLVDTSVSTTSRPR	VSQSTSSLVDTSVSTTSRPR	3	VSQSTSSLVDTSVSTTSRPR3	6201.72	6342.45	13594.4
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	VSQTDNSITLEWR	VSQTDNSITLEWR	2	VSQTDNSITLEWR2	390579	462968	389698
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	VSQTDNSITLEWR	VSQTDNSITLEWR	3	VSQTDNSITLEWR3	43568.9	66438.6	67163.4
D3Z8X6	D3Z8X6	D3Z8X6_RAT	Dtx3l	E3 ubiquitin-protein ligase	1	VSQTLVPAPVK	VSQTLVPAPVK	2	VSQTLVPAPVK2	12887.5	11412.8	5452.89
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	VSQTTWDSGFCAVNPK	VSQTTWDSGFC(UniMod:4)AVNPK	2	VSQTTWDSGFC(UniMod:4)AVNPK2	633877	496542	571273
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	VSQTTWDSGFCAVNPK	VSQTTWDSGFC(UniMod:4)AVNPK	3	VSQTTWDSGFC(UniMod:4)AVNPK3	143520	122911	138095
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	VSQYIDWLVK	VSQYIDWLVK	2	VSQYIDWLVK2	499026	471215	532064
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	VSQYIDWLVK	VSQYIDWLVK	3	VSQYIDWLVK3	2321.72	437.343	3054.96
G3V8S6	G3V8S6	G3V8S6_RAT	Hrc	Histidine rich calcium binding protein	1	VSRDGDEDISTEFGHK	VSRDGDEDISTEFGHK	4	VSRDGDEDISTEFGHK4		3702.92	2915.56
Q5XIF5	Q5XIF5	DEGS1_RAT	Degs1	Sphingolipid delta(4)-desaturase DES1	1	VSREEFEWVYTDQPHAAR	VSREEFEWVYTDQPHAAR	3	VSREEFEWVYTDQPHAAR3	12920	5882.96	10816.3
Q5XIF5	Q5XIF5	DEGS1_RAT	Degs1	Sphingolipid delta(4)-desaturase DES1	1	VSREEFEWVYTDQPHAAR	VSREEFEWVYTDQPHAAR	4	VSREEFEWVYTDQPHAAR4	85707.8	90348.2	93373
Q5M7W6	Q5M7W6	F234A_RAT	Fam234a	Protein FAM234A	1	VSSACVLVGR	VSSAC(UniMod:4)VLVGR	2	VSSAC(UniMod:4)VLVGR2	4131.36		4615.68
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	VSSALHSVEMELR	VSSALHSVEMELR	2	VSSALHSVEMELR2	21370.9	23578.5	20409.5
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	VSSALHSVEMELR	VSSALHSVEMELR	3	VSSALHSVEMELR3	256816	285862	290870
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	VSSALHSVEMELRK	VSSALHSVEMELRK	3	VSSALHSVEMELRK3	34030.8	45242.4	33688.9
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	VSSALHSVEMELRK	VSSALHSVEMELRK	4	VSSALHSVEMELRK4	16042.7	14554.7	25580.3
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	VSSCPCVENVQGSLLIPVHVK	VSSC(UniMod:4)PC(UniMod:4)VENVQGSLLIPVHVK	3	VSSC(UniMod:4)PC(UniMod:4)VENVQGSLLIPVHVK3	21678.2	25016.2	29221.8
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	VSSDEDLK	VSSDEDLK	2	VSSDEDLK2		13972.3	
D4A2G6	D4A2G6	D4A2G6_RAT	Thbs2	Thrombospondin 2	1	VSSDNQFLLELIGGPLK	VSSDNQFLLELIGGPLK	2	VSSDNQFLLELIGGPLK2	1425.79	2364.62	
P28075	P28075	PSB5_RAT	Psmb5	Proteasome subunit beta type-5	1	VSSDNVADLHDK	VSSDNVADLHDK	2	VSSDNVADLHDK2	225375	180322	199035
P28075	P28075	PSB5_RAT	Psmb5	Proteasome subunit beta type-5	1	VSSDNVADLHDK	VSSDNVADLHDK	3	VSSDNVADLHDK3	1.8716e+06	1.84408e+06	2.00081e+06
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	VSSDQLSSENLTSAVGQK	VSSDQLSSENLTSAVGQK	2	VSSDQLSSENLTSAVGQK2	5077.45	11110.4	4531.51
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	VSSDVIDQK	VSSDVIDQK	2	VSSDVIDQK2	382868	406999	365855
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	VSSEEALK	VSSEEALK	1	VSSEEALK1	1050.63	659.799	2075.07
Q4L0E8	Q4L0E8	RGS18_RAT	Rgs18	Regulator of G-protein signaling 18	1	VSSEEALK	VSSEEALK	2	VSSEEALK2	614664	595646	680050
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	VSSENGVPETR	VSSENGVPETR	2	VSSENGVPETR2	57108.6	55075.3	53733.6
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	VSSFMSTLQK	VSSFMSTLQK	2	VSSFMSTLQK2	70274.4	87083.9	82550.9
D3ZSC2	D3ZSC2	D3ZSC2_RAT	Pdcd2l	Programmed cell death 2-like	1	VSSGDPTFYK	VSSGDPTFYK	2	VSSGDPTFYK2	25040.3	27693.4	34910.6
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	VSSGTPIK	VSSGTPIK	2	VSSGTPIK2	473334	594219	565532
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	VSSGYVPPPVATPFVPK	VSSGYVPPPVATPFVPK	2	VSSGYVPPPVATPFVPK2	296728	265273	304801
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	VSSGYVPPPVATPFVPK	VSSGYVPPPVATPFVPK	3	VSSGYVPPPVATPFVPK3	34153.3	31530.5	33107
D4A7U1	D4A7U1	D4A7U1_RAT	Zyx	Zyxin	1	VSSGYVPPPVATPFVPKPSTK	VSSGYVPPPVATPFVPKPSTK	3	VSSGYVPPPVATPFVPKPSTK3	256019	240865	217570
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	VSSLEAELR	VSSLEAELR	2	VSSLEAELR2	8796.51	12342.4	8750.82
Q3T1I9	Q3T1I9	RPAP1_RAT	Rpap1	RNA polymerase II-associated protein 1	1	VSSLLLPVPK	VSSLLLPVPK	2	VSSLLLPVPK2	8094.86	7238.06	10409.8
G3V6N7	G3V6N7	G3V6N7_RAT	Slc12a6	Solute carrier family 12, member 6	1	VSSLLNR	VSSLLNR	2	VSSLLNR2	36597.3	34564.3	39686.1
P24268	P24268	CATD_RAT	Ctsd	Cathepsin D	1	VSSLPIITFK	VSSLPIITFK	2	VSSLPIITFK2	151077	155963	172023
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	VSSLPLTEAPAFILPPR	VSSLPLTEAPAFILPPR	2	VSSLPLTEAPAFILPPR2	18392.2	15262.4	9586.35
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	VSSLPLTEAPAFILPPR	VSSLPLTEAPAFILPPR	3	VSSLPLTEAPAFILPPR3	48141.8	43768.4	35207.1
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	VSSLSAPFSQNTEVEQK	VSSLSAPFSQNTEVEQK	2	VSSLSAPFSQNTEVEQK2	7977.43		
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	VSSLTLK	VSSLTLK	1	VSSLTLK1	18942.2	13657.8	14978.7
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	VSSLYVGSDLLK	VSSLYVGSDLLK	2	VSSLYVGSDLLK2	73947.7	69175.9	64913.6
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	VSSMVIPYPMLDHCNNMCTMR	VSSMVIPYPMLDHC(UniMod:4)NNMC(UniMod:4)TMR	3	VSSMVIPYPMLDHC(UniMod:4)NNMC(UniMod:4)TMR3	64568	42160.8	54918.6
Q9JJH5	Q9JJH5	F262_RAT	Pfkfb2	6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2	1	VSSPDYPER	VSSPDYPER	2	VSSPDYPER2		17640.4	12627.7
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	VSSPPPTITQQGK	VSSPPPTITQQGK	2	VSSPPPTITQQGK2	11120.3	9028.44	7995.28
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	VSSPTLLEALSSDFLACK	VSSPTLLEALSSDFLAC(UniMod:4)K	2	VSSPTLLEALSSDFLAC(UniMod:4)K2	3344.88	4837.53	7391.85
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	VSSPTVNTTLR	VSSPTVNTTLR	2	VSSPTVNTTLR2	32082.4	23354.2	37806.7
P53676	P53676	AP3M1_RAT	Ap3m1	AP-3 complex subunit mu-1	1	VSSQNLVAIPVYVK	VSSQNLVAIPVYVK	2	VSSQNLVAIPVYVK2	90624.3	110413	106767
P53676	P53676	AP3M1_RAT	Ap3m1	AP-3 complex subunit mu-1	1	VSSQNLVAIPVYVK	VSSQNLVAIPVYVK	3	VSSQNLVAIPVYVK3	3419.38	6910.25	2155.25
A0A096MJF9	A0A096MJF9	A0A096MJF9_RAT	Tmem132e	Transmembrane protein 132E	1	VSSSCDYVFVSGK	VSSSC(UniMod:4)DYVFVSGK	2	VSSSC(UniMod:4)DYVFVSGK2	4092.23	3293.54	8762.39
Q80WD1	Q80WD1	R4RL2_RAT	Rtn4rl2	Reticulon-4 receptor-like 2	1	VSSSDVTCATPPER	VSSSDVTC(UniMod:4)ATPPER	2	VSSSDVTC(UniMod:4)ATPPER2	48199.1	37659.3	39215.9
Q80WD1	Q80WD1	R4RL2_RAT	Rtn4rl2	Reticulon-4 receptor-like 2	1	VSSSDVTCATPPER	VSSSDVTC(UniMod:4)ATPPER	3	VSSSDVTC(UniMod:4)ATPPER3	28176.9		28642.4
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	VSSSIPEVQK	VSSSIPEVQK	2	VSSSIPEVQK2	878796	943382	896456
Q5XIA5	Q5XIA5	Q5XIA5_RAT	Coasy	Coenzyme A synthase	1	VSSSSFR	VSSSSFR	2	VSSSSFR2	21437.7	15416.8	18981.6
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	VSSTATTQDVIETLAEK	VSSTATTQDVIETLAEK	2	VSSTATTQDVIETLAEK2	10328.6	8829.15	5990.01
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	VSSTATTQDVIETLAEK	VSSTATTQDVIETLAEK	3	VSSTATTQDVIETLAEK3	2529.56	4040.78	
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	VSSTWTTTTSATGLPTLEPAPVR	VSSTWTTTTSATGLPTLEPAPVR	3	VSSTWTTTTSATGLPTLEPAPVR3	52196.7	33984.8	54734.1
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	VSSTWTTTTSATGLPTLEPAPVRR	VSSTWTTTTSATGLPTLEPAPVRR	3	VSSTWTTTTSATGLPTLEPAPVRR3	146392	164817	179384
Q62865	Q62865	PDE3A_RAT	Pde3a	cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A	1	VSSTWTTTTSATGLPTLEPAPVRR	VSSTWTTTTSATGLPTLEPAPVRR	4	VSSTWTTTTSATGLPTLEPAPVRR4		4220.83	10516.9
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	VSSVALCK	VSSVALC(UniMod:4)K	2	VSSVALC(UniMod:4)K2	51616.7	85796.8	92735.4
D4A415	D4A415	D4A415_RAT	Abraxas2	Abraxas 2, BRISC complex subunit	1	VSSVPNTSQSYAK	VSSVPNTSQSYAK	2	VSSVPNTSQSYAK2	165468	183367	191961
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	VSSVSSSALVSSLHMMK	VSSVSSSALVSSLHMMK	2	VSSVSSSALVSSLHMMK2	12133.4	9229.24	10876.7
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	VSSVSSSALVSSLHMMK	VSSVSSSALVSSLHMMK	3	VSSVSSSALVSSLHMMK3	61044.4	72581.6	56329.6
Q3T1L0	Q3T1L0	A16A1_RAT	Aldh16a1	Aldehyde dehydrogenase family 16 member A1	1	VSSYVAEGGAK	VSSYVAEGGAK	2	VSSYVAEGGAK2	46345.3	27728.4	34783.7
Q68FS8	Q68FS8	Q68FS8_RAT	Rtca	RNA 3'-terminal-phosphate cyclase (ATP)	1	VSTALSCLLGLPLR	VSTALSC(UniMod:4)LLGLPLR	2	VSTALSC(UniMod:4)LLGLPLR2	11997.7	9328.98	11242.2
Q68FS8	Q68FS8	Q68FS8_RAT	Rtca	RNA 3'-terminal-phosphate cyclase (ATP)	1	VSTALSCLLGLPLR	VSTALSC(UniMod:4)LLGLPLR	3	VSTALSC(UniMod:4)LLGLPLR3	4726.43	4935.76	8968.47
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	VSTAVLSITAK	VSTAVLSITAK	2	VSTAVLSITAK2	157067	153037	168134
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	VSTDGADNR	VSTDGADNR	2	VSTDGADNR2			125373
Q9QUH3	Q9QUH3	APOA5_RAT	Apoa5	Apolipoprotein A-V	1	VSTDGADNRDSLDPQALSDEVR	VSTDGADNRDSLDPQALSDEVR	3	VSTDGADNRDSLDPQALSDEVR3	459958	444658	494174
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	VSTDGVITVK	VSTDGVITVK	2	VSTDGVITVK2	14002.6	10983.8	8715.99
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	VSTDQAAAEQLSLAQAELK	VSTDQAAAEQLSLAQAELK	3	VSTDQAAAEQLSLAQAELK3	3813.24	4763.59	5223.58
Q5PQN7	Q5PQN7	LZIC_RAT	Lzic	Protein LZIC	1	VSTELGSGDK	VSTELGSGDK	2	VSTELGSGDK2	26790.5	17716.8	24938.4
Q9EQS0	Q9EQS0	TALDO_RAT	Taldo1	Transaldolase	1	VSTEVDAR	VSTEVDAR	2	VSTEVDAR2	19282.1	15272.5	21831
F1M784	F1M784	F1M784_RAT	Pik3ap1	Phosphoinositide-3-kinase adaptor protein 1	1	VSTEVEFSPEDSPSVR	VSTEVEFSPEDSPSVR	2	VSTEVEFSPEDSPSVR2	29378.4	22244.8	25115.9
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	VSTEVTLAVK	VSTEVTLAVK	2	VSTEVTLAVK2	146877	159965	155253
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	VSTHSQEMDTGAEYGMGSSTK	VSTHSQEMDTGAEYGMGSSTK	3	VSTHSQEMDTGAEYGMGSSTK3	244244	248154	299141
P70541	P70541	EI2BG_RAT	Eif2b3	Translation initiation factor eIF-2B subunit gamma	1	VSTLGLYMEANR	VSTLGLYMEANR	2	VSTLGLYMEANR2	33776.9	35504	42999.2
E9PU02	E9PU02	E9PU02_RAT	Trappc9	Trafficking protein particle complex subunit 9	1	VSTLPATSTR	VSTLPATSTR	2	VSTLPATSTR2	16060.2	22649.7	
B5DFL3	B5DFL3	B5DFL3_RAT	Itgb1bp1	Integrin subunit beta 1 binding protein 1	1	VSTMDQHGVLHR	VSTMDQHGVLHR	3	VSTMDQHGVLHR3	5134.72	1718.22	4307.91
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	VSTNGSEDPEVAASGENK	VSTNGSEDPEVAASGENK	2	VSTNGSEDPEVAASGENK2	3482.49	3045.78	1642.19
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	VSTNIDQLQK	VSTNIDQLQK	2	VSTNIDQLQK2	24616	25963	19562.7
P02651	P02651	APOA4_RAT	Apoa4	Apolipoprotein A-IV	1	VSTNIDQLQK	VSTNIDQLQK	3	VSTNIDQLQK3	6317.9	2077.65	
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	VSTSDFYVDENTVVK	VSTSDFYVDENTVVK	2	VSTSDFYVDENTVVK2	942339	945664	983074
Q5M8C3	Q5M8C3	Q5M8C3_RAT	Serpina4	Serpin family A member 4	1	VSTSDFYVDENTVVK	VSTSDFYVDENTVVK	3	VSTSDFYVDENTVVK3	87379.3	80451.6	86620.9
Q5XIK2	Q5XIK2	TMX2_RAT	Tmx2	Thioredoxin-related transmembrane protein 2	1	VSTSPLTK	VSTSPLTK	2	VSTSPLTK2	31034.3	37152.2	38168.8
Q05096	Q05096	MYO1B_RAT	Myo1b	Unconventional myosin-Ib	1	VSTTLNVAQAYYAR	VSTTLNVAQAYYAR	2	VSTTLNVAQAYYAR2	3792.57	2898.32	2368.98
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	VSTTSQDPLGCVK	VSTTSQDPLGC(UniMod:4)VK	2	VSTTSQDPLGC(UniMod:4)VK2	8135.75	11528.8	14419
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	VSTTTSSDSYVGLWR	VSTTTSSDSYVGLWR	2	VSTTTSSDSYVGLWR2	14556.7	18004.1	15140.5
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	VSTVFWK	VSTVFWK	2	VSTVFWK2	80835.2	90515.4	64885.3
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	VSTVLTAQK	VSTVLTAQK	1	VSTVLTAQK1	19040.1	12135.3	17068
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	VSTVLTAQK	VSTVLTAQK	2	VSTVLTAQK2	4.66223e+06	4.53484e+06	4.39241e+06
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	VSTVTTHSSDSEVPSR	VSTVTTHSSDSEVPSR	2	VSTVTTHSSDSEVPSR2	1.045e+06	1.02012e+06	866520
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	VSTVTTHSSDSEVPSR	VSTVTTHSSDSEVPSR	3	VSTVTTHSSDSEVPSR3	21743.4	10566.4	11860.4
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	VSTVTTHSSDSEVPSR	VSTVTTHSSDSEVPSR	4	VSTVTTHSSDSEVPSR4	74970.5	79349.9	94861.1
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	VSTVTTHSSDSEVPSRVTEVVVK	VSTVTTHSSDSEVPSRVTEVVVK	3	VSTVTTHSSDSEVPSRVTEVVVK3	13741.9	10985.4	12435.9
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	VSTVTTHSSDSEVPSRVTEVVVK	VSTVTTHSSDSEVPSRVTEVVVK	4	VSTVTTHSSDSEVPSRVTEVVVK4	49080.7	78941.7	72346.8
Q9Z0V5	Q9Z0V5	PRDX4_RAT	Prdx4	Peroxiredoxin-4	1	VSVADHSLHLSK	VSVADHSLHLSK	2	VSVADHSLHLSK2	4391.94		1856.39
Q9Z0V5	Q9Z0V5	PRDX4_RAT	Prdx4	Peroxiredoxin-4	1	VSVADHSLHLSK	VSVADHSLHLSK	3	VSVADHSLHLSK3	144405	113396	114637
Q9Z1Z1	Q9Z1Z1	E2AK3_RAT	Eif2ak3	Eukaryotic translation initiation factor 2-alpha kinase 3	1	VSVADWK	VSVADWK	2	VSVADWK2	15917.1	20422.5	12112.2
G3V8Q8	G3V8Q8	G3V8Q8_RAT	Sec23ip	SEC23 interacting protein	1	VSVAGHSLGSLILFDILSNQK	VSVAGHSLGSLILFDILSNQK	3	VSVAGHSLGSLILFDILSNQK3	20389.2	27435.4	25992.4
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	VSVAVVPK	VSVAVVPK	1	VSVAVVPK1	10773.2	7552.77	10116.8
D3ZDF3	D3ZDF3	D3ZDF3_RAT	Irag1	Inositol 1,4,5-triphosphate receptor associated 1	1	VSVAVVPK	VSVAVVPK	2	VSVAVVPK2	262014	270900	284824
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	VSVAYNSK	VSVAYNSK	1	VSVAYNSK1	591664	716060	769180
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	VSVAYNSK	VSVAYNSK	2	VSVAYNSK2	3.00717e+07	3.49868e+07	3.70676e+07
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	VSVAYNSKK	VSVAYNSKK	2	VSVAYNSKK2	71465.9	80757.6	78060.4
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	VSVDDLCK	VSVDDLC(UniMod:4)K	2	VSVDDLC(UniMod:4)K2	8188.03		6851.73
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	VSVDDLK	VSVDDLK	2	VSVDDLK2	30591.7	31989.7	36234
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VSVDENIMSTHSTAR	VSVDENIMSTHSTAR	2	VSVDENIMSTHSTAR2	736.176	3767.61	2380.13
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VSVDENIMSTHSTAR	VSVDENIMSTHSTAR	3	VSVDENIMSTHSTAR3	54203.9	50873.3	42765.2
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	VSVEDVTVLVDYTVR	VSVEDVTVLVDYTVR	2	VSVEDVTVLVDYTVR2	25539.4	19576.3	8251.14
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	VSVELNDLVAGEGK	VSVELNDLVAGEGK	2	VSVELNDLVAGEGK2	9833.97	10945.7	6508.43
Q6P0K8	Q6P0K8	PLAK_RAT	Jup	Junction plakoglobin	1	VSVELTNSLFK	VSVELTNSLFK	2	VSVELTNSLFK2	22316.7	16154.5	20728.8
D3ZW15	D3ZW15	D3ZW15_RAT	Sec24b	SEC24 homolog B, COPII coat complex component	1	VSVFQTQLPSLGAGLLQSR	VSVFQTQLPSLGAGLLQSR	3	VSVFQTQLPSLGAGLLQSR3	7999.73	3965.22	4387.71
Q9EPF2	Q9EPF2	MUC18_RAT	Mcam	Cell surface glycoprotein MUC18	1	VSVGIFGSPWMAAK	VSVGIFGSPWMAAK	2	VSVGIFGSPWMAAK2	23141.2	41476.9	22127.5
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	VSVHIIEGDHR	VSVHIIEGDHR	3	VSVHIIEGDHR3	13473	15137.6	10826
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	VSVHVLAR	VSVHVLAR	2	VSVHVLAR2	2272.44	763.991	2449.05
Q68FU3	Q68FU3	ETFB_RAT	Etfb	Electron transfer flavoprotein subunit beta	1	VSVISVEEPPQR	VSVISVEEPPQR	2	VSVISVEEPPQR2	102392	95623.1	97121.7
Q68FU3	Q68FU3	ETFB_RAT	Etfb	Electron transfer flavoprotein subunit beta	1	VSVISVEEPPQR	VSVISVEEPPQR	3	VSVISVEEPPQR3	10091	9756.15	18676.5
G3V9R2	A0A0G2K975;G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	0	VSVLCQDGYLTQGPEEMVCK	VSVLC(UniMod:4)QDGYLTQGPEEMVC(UniMod:4)K	3	VSVLC(UniMod:4)QDGYLTQGPEEMVC(UniMod:4)K3	86143.5	108760	52393.9
Q80WF4	Q80WF4	T132A_RAT	Tmem132a	Transmembrane protein 132A	1	VSVLDLR	VSVLDLR	2	VSVLDLR2	6565.1	7163.17	
P54001	P54001	P4HA1_RAT	P4ha1	Prolyl 4-hydroxylase subunit alpha-1	1	VSVLDYLSYAVYQQGDLDK	VSVLDYLSYAVYQQGDLDK	3	VSVLDYLSYAVYQQGDLDK3		4002.37	3566.77
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	VSVLEEK	VSVLEEK	2	VSVLEEK2	21968		18796.4
P51111	P51111	HD_RAT	Htt	Huntingtin	1	VSVLFDR	VSVLFDR	2	VSVLFDR2	59681.1	73659.3	58363.7
A0A8I6AMS6	A0A8I6AMS6	A0A8I6AMS6_RAT	Rangap1	RAN GTPase activating protein 1	1	VSVLIVQQTDTSDPEK	VSVLIVQQTDTSDPEK	2	VSVLIVQQTDTSDPEK2	4286.49	6501.38	2613.03
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	VSVLTGIIK	VSVLTGIIK	2	VSVLTGIIK2	14706	19587.5	12259
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	VSVLYPEDTVVQSTEVDR	VSVLYPEDTVVQSTEVDR	3	VSVLYPEDTVVQSTEVDR3	15641.4	7044.73	
P06214	P06214	HEM2_RAT	Alad	Delta-aminolevulinic acid dehydratase	1	VSVMSYSAK	VSVMSYSAK	2	VSVMSYSAK2	39053.6	27752.3	26054.4
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	VSVNCAK	VSVNC(UniMod:4)AK	2	VSVNC(UniMod:4)AK2	34294		39485.6
A0A0G2JZH8	A0A0G2JZH8	A0A0G2JZH8_RAT	Pdhx	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	1	VSVNDFIIR	VSVNDFIIR	2	VSVNDFIIR2	25313.8	27985.1	25174.7
P16636	P16636	LYOX_RAT	Lox	Protein-lysine 6-oxidase	1	VSVNPSYLVPESDYSNNVVR	VSVNPSYLVPESDYSNNVVR	3	VSVNPSYLVPESDYSNNVVR3	7973.26	8318.91	10856.7
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	VSVPEEISVDLEK	VSVPEEISVDLEK	2	VSVPEEISVDLEK2	105584	119074	93542.7
F1LUU1	F1LUU1	F1LUU1_RAT	Itga11	Integrin subunit alpha 11	1	VSVPFWNGCNEDEHCVPDLVLDAR	VSVPFWNGC(UniMod:4)NEDEHC(UniMod:4)VPDLVLDAR	3	VSVPFWNGC(UniMod:4)NEDEHC(UniMod:4)VPDLVLDAR3	4637.77	2280.41	
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	VSVPLIAQGNSYPSETTVK	VSVPLIAQGNSYPSETTVK	3	VSVPLIAQGNSYPSETTVK3	37059.4	27276.5	50405.6
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	VSVPTHPDDVGDASLTMVK	VSVPTHPDDVGDASLTMVK	3	VSVPTHPDDVGDASLTMVK3	17389.5	20656.4	35248.1
A0A8I6AM66	A0A8I6AM66	A0A8I6AM66_RAT	Cdh15	Cadherin 15	1	VSVQNEAPLQTAAPR	VSVQNEAPLQTAAPR	2	VSVQNEAPLQTAAPR2	11698.3	10595.7	8509.09
A0A8I6AM66	A0A8I6AM66	A0A8I6AM66_RAT	Cdh15	Cadherin 15	1	VSVQNEAPLQTAAPR	VSVQNEAPLQTAAPR	3	VSVQNEAPLQTAAPR3		2928.11	1890.44
Q710E6	Q710E6	SUCO_RAT	Suco	SUN domain-containing ossification factor	1	VSVSEQDGGDPK	VSVSEQDGGDPK	2	VSVSEQDGGDPK2	4450.12	7230.37	6248.89
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	VSVSSGGDCIR	VSVSSGGDC(UniMod:4)IR	2	VSVSSGGDC(UniMod:4)IR2	64255.5	78071.8	65938.7
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	VSVTFDPFCYLTLPLPLKK	VSVTFDPFC(UniMod:4)YLTLPLPLKK	3	VSVTFDPFC(UniMod:4)YLTLPLPLKK3	1343.71	6049.25	
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	VSVTVDYIR	VSVTVDYIR	2	VSVTVDYIR2	13542.6	8106.36	9138.65
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	VSVTVDYIRPASPATETVPAFSER	VSVTVDYIRPASPATETVPAFSER	3	VSVTVDYIRPASPATETVPAFSER3	107342	90572	93814.6
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	VSVVEHR	VSVVEHR	2	VSVVEHR2	79271.1	142247	120182
P29147	P29147	BDH_RAT	Bdh1	D-beta-hydroxybutyrate dehydrogenase, mitochondrial	1	VSVVEPGNFIAATSLYSPER	VSVVEPGNFIAATSLYSPER	3	VSVVEPGNFIAATSLYSPER3	8410.18	9270.55	16735.6
Q642B0	Q642B0	Q642B0_RAT	Gpc4	Glypican 4	1	VSVVNPTAQCTQALLK	VSVVNPTAQC(UniMod:4)TQALLK	2	VSVVNPTAQC(UniMod:4)TQALLK2	45943.9	50397.6	41379.6
Q642B0	Q642B0	Q642B0_RAT	Gpc4	Glypican 4	1	VSVVNPTAQCTQALLK	VSVVNPTAQC(UniMod:4)TQALLK	3	VSVVNPTAQC(UniMod:4)TQALLK3	4234.47	6328.94	2827.9
Q9JJ46	Q9JJ46	EBP_RAT	Ebp	3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase	1	VSVVPLGTGR	VSVVPLGTGR	2	VSVVPLGTGR2	30249.7	22336.9	24603
P86410	P86410	RLGPB_RAT	Ralgapb	Ral GTPase-activating protein subunit beta	1	VSVVWVER	VSVVWVER	2	VSVVWVER2	37139.2	32184	47273.9
A0A8I6AM66	A0A8I6AM66	A0A8I6AM66_RAT	Cdh15	Cadherin 15	1	VSVWVQDTNEAPVFPENPLR	VSVWVQDTNEAPVFPENPLR	3	VSVWVQDTNEAPVFPENPLR3	2403.65		
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	VSVYAVPDK	VSVYAVPDK	2	VSVYAVPDK2	47253	30300.2	35706.3
P97834	P97834	CSN1_RAT	Gps1	COP9 signalosome complex subunit 1	1	VSVYLQNWSHVLSYVSK	VSVYLQNWSHVLSYVSK	3	VSVYLQNWSHVLSYVSK3	11112.2	15493.4	19227.3
A0A8I6APP3	A0A8I6APP3	A0A8I6APP3_RAT	Plekho2	Pleckstrin homology domain containing O2	1	VSWENPSPEEPSVSER	VSWENPSPEEPSVSER	2	VSWENPSPEEPSVSER2	267949	265221	305344
A0A8I6APP3	A0A8I6APP3	A0A8I6APP3_RAT	Plekho2	Pleckstrin homology domain containing O2	1	VSWENPSPEEPSVSER	VSWENPSPEEPSVSER	3	VSWENPSPEEPSVSER3	27330.4	26951.3	25041.2
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	VSWQEPLER	VSWQEPLER	2	VSWQEPLER2	6599.95	8529.77	3972.58
Q5PQN6	Q5PQN6	SPE39_RAT	Vipas39	Spermatogenesis-defective protein 39 homolog	1	VSWTGEPVGSISWSIK	VSWTGEPVGSISWSIK	2	VSWTGEPVGSISWSIK2	11824.5	8988.05	16606.7
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	VSWVHATGDFDHYEVTIK	VSWVHATGDFDHYEVTIK	4	VSWVHATGDFDHYEVTIK4	2321.83		7940.21
Q80Z70	Q80Z70	SE1L1_RAT	Sel1l	Protein sel-1 homolog 1	1	VSYALLFGDYLTQNIQAAK	VSYALLFGDYLTQNIQAAK	3	VSYALLFGDYLTQNIQAAK3	4021.95		4573.31
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	VSYDLGSGMASVVSNQNHNDGK	VSYDLGSGMASVVSNQNHNDGK	3	VSYDLGSGMASVVSNQNHNDGK3		11831.6	6785.38
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	VSYDMDGFCER	VSYDMDGFC(UniMod:4)ER	2	VSYDMDGFC(UniMod:4)ER2	30563	21413.4	23447.6
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	VSYDVTSAR	VSYDVTSAR	2	VSYDVTSAR2	35409.6	33726.9	35440
Q2PQA9	P56536;Q2PQA9;Q6QLM7	KINH_RAT	Kif5b	Kinesin-1 heavy chain	0	VSYFEIYLDK	VSYFEIYLDK	2	VSYFEIYLDK2	2805.62	2706.78	4203.91
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	VSYFPTVPGVYIVSTK	VSYFPTVPGVYIVSTK	2	VSYFPTVPGVYIVSTK2	12244.3	9255.97	7046.55
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	VSYFVFGDFNFR	VSYFVFGDFNFR	2	VSYFVFGDFNFR2	13468.6	16020.6	20555.5
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	VSYLEIYNEEVR	VSYLEIYNEEVR	2	VSYLEIYNEEVR2	15052.6	15470	8368.99
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	VSYLEIYNEEVRDLLGK	VSYLEIYNEEVRDLLGK	3	VSYLEIYNEEVRDLLGK3	11039.5		4420.18
Q3MQ06	Q3MQ06	ATG5_RAT	Atg5	Autophagy protein 5	1	VSYLTLVTDK	VSYLTLVTDK	2	VSYLTLVTDK2	26633.6	14465.2	24910.1
P58751	P58751	RELN_RAT	Reln	Reelin	1	VSYNVPLEAR	VSYNVPLEAR	2	VSYNVPLEAR2	95605.8	97325	96329.6
Q4V888	Q4V888	PP4P2_RAT	Pip4p2	Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase	1	VSYPEHGFA	VSYPEHGFA	2	VSYPEHGFA2	4586.45	6124	10904.9
Q62638	Q62638	GSLG1_RAT	Glg1	Golgi apparatus protein 1	1	VSYSLAK	VSYSLAK	2	VSYSLAK2	52224.7	45516.8	73114.2
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	VSYSLNGK	VSYSLNGK	1	VSYSLNGK1	1997.71		
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	VSYSLNGK	VSYSLNGK	2	VSYSLNGK2	91329.3	102700	108114
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	VSYTIPETHR	VSYTIPETHR	2	VSYTIPETHR2	8360.1	19204.5	5707.95
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	VSYTIPETHR	VSYTIPETHR	3	VSYTIPETHR3	77966.4	84044.2	87991.4
A0A1W2Q5Z7	A0A1W2Q5Z7	A0A1W2Q5Z7_RAT	St3gal1	ST3 beta-galactoside alpha-2,3-sialyltransferase 1	1	VSYWFDQR	VSYWFDQR	2	VSYWFDQR2	36698.8	41859.3	55644
A0A1B0GWT7	A0A1B0GWT7	A0A1B0GWT7_RAT	Lamtor2	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2	1	VTAAIASNIWAAYDR	VTAAIASNIWAAYDR	2	VTAAIASNIWAAYDR2	8711.63	8066.29	13726.3
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	VTAASGHCGAFSGSDSNR	VTAASGHC(UniMod:4)GAFSGSDSNR	3	VTAASGHC(UniMod:4)GAFSGSDSNR3	53163.4	56119.8	52797.4
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	VTADGEQTGQDAER	VTADGEQTGQDAER	2	VTADGEQTGQDAER2	25086.5		12787.7
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	VTADMVK	VTADMVK	2	VTADMVK2	38938.9	91758.6	67210.7
O08651	O08651	SERA_RAT	Phgdh	D-3-phosphoglycerate dehydrogenase	1	VTADVINAAEK	VTADVINAAEK	2	VTADVINAAEK2	18365.8	12833.9	17921.2
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	VTADVTSAVMGNPVTR	VTADVTSAVMGNPVTR	2	VTADVTSAVMGNPVTR2	35990.8	38249.4	36592
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	VTADVTSAVMGNPVTR	VTADVTSAVMGNPVTR	3	VTADVTSAVMGNPVTR3	5148.92	7881.34	7382.56
Q66H94	Q66H94	FKBP9_RAT	Fkbp9	Peptidyl-prolyl cis-trans isomerase FKBP9	1	VTAEEFK	VTAEEFK	2	VTAEEFK2	15401.3	24033.3	24603.4
F1MAD3	F1MAD3	F1MAD3_RAT	Pkd1	Polycystin 1, transient receptor potential channel interacting	1	VTAEEPICGLR	VTAEEPIC(UniMod:4)GLR	2	VTAEEPIC(UniMod:4)GLR2		5892.88	8840.59
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	VTAEVVLAHPGGGSTAR	VTAEVVLAHPGGGSTAR	2	VTAEVVLAHPGGGSTAR2	38243.7	27164.3	27568.9
P07153	P07153	RPN1_RAT	Rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	1	VTAEVVLAHPGGGSTAR	VTAEVVLAHPGGGSTAR	3	VTAEVVLAHPGGGSTAR3	222057	215789	245431
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	VTAFLKWIDR	VTAFLKWIDR	3	VTAFLKWIDR3	12570.9	8306.75	6624
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	VTAFPATR	VTAFPATR	2	VTAFPATR2	133518	131635	149693
Q9QZK5	Q9QZK5	HTRA1_RAT	Htra1	Serine protease HTRA1	1	VTAGISFAIPSDK	VTAGISFAIPSDK	2	VTAGISFAIPSDK2	9732.74	6378.39	9380.52
B0BNB9	B0BNB9;D3ZKF5	B0BNB9_RAT	Htra2	HtrA serine peptidase 2	0	VTAGISFAIPSDR	VTAGISFAIPSDR	2	VTAGISFAIPSDR2	127242	127601	107487
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	VTAGPTSLDLDVNVQR	VTAGPTSLDLDVNVQR	2	VTAGPTSLDLDVNVQR2	8450.02	12420.7	7349.3
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	VTAGYTGIK	VTAGYTGIK	2	VTAGYTGIK2	74792.3	65703.4	57452.7
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	VTAHAEGYTSSAK	VTAHAEGYTSSAK	2	VTAHAEGYTSSAK2	2568.77		
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	VTAHAEGYTSSAK	VTAHAEGYTSSAK	3	VTAHAEGYTSSAK3	31963.8		44456.6
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	VTAIDFR	VTAIDFR	2	VTAIDFR2	229387	252612	244498
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	VTAIVTQGCK	VTAIVTQGC(UniMod:4)K	2	VTAIVTQGC(UniMod:4)K2	1.00206e+07	1.25875e+07	1.12014e+07
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	VTAIYIDPATHLQK	VTAIYIDPATHLQK	2	VTAIYIDPATHLQK2	2827.19	8102.56	5161.5
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	VTAIYIDPATHLQK	VTAIYIDPATHLQK	3	VTAIYIDPATHLQK3	41354.8	48951	38558.8
F1LS35	F1LS35	F1LS35_RAT	Hps5	Hermansky-Pudlak syndrome 5 protein homolog	1	VTALCWDTAVLR	VTALC(UniMod:4)WDTAVLR	2	VTALC(UniMod:4)WDTAVLR2	3036.85	2224.88	6666.7
A0A8I5Y8A9	A0A8I5Y8A9	A0A8I5Y8A9_RAT	Gltpd2	Glycolipid transfer protein domain containing 2	1	VTALEAHVHGPDASHYTSLVTMATWER	VTALEAHVHGPDASHYTSLVTMATWER	4	VTALEAHVHGPDASHYTSLVTMATWER4	5498.12	6774.79	
F7F4L4	F7F4L4	F7F4L4_RAT	Dnajb12	DnaJ heat shock protein family (Hsp40) member B12	1	VTALIESLNQK	VTALIESLNQK	2	VTALIESLNQK2	7842.06	6668.81	3248.81
Q6AY25	Q6AY25	TMED3_RAT	Tmed3	Transmembrane emp24 domain-containing protein 3	1	VTALTQMESACVTIHEALK	VTALTQMESAC(UniMod:4)VTIHEALK	3	VTALTQMESAC(UniMod:4)VTIHEALK3	8970.33	15027.4	12279.7
P36370	P36372;P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	0	VTALVGPNGSGK	VTALVGPNGSGK	2	VTALVGPNGSGK2	46528.1	51236.5	47080.1
Q9QYJ4	Q9QYJ4	ABCB9_RAT	Abcb9	ABC-type oligopeptide transporter ABCB9	1	VTALVGPSGSGK	VTALVGPSGSGK	2	VTALVGPSGSGK2	4837.13	2477.1	
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VTANNDK	VTANNDK	1	VTANNDK1	1520.57		6228.94
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VTANNDK	VTANNDK	2	VTANNDK2	43466.7	38123.3	51167.1
A0A8I5YCC9	A0A8I5YCC9	A0A8I5YCC9_RAT	Itga5	Integrin subunit alpha 5	1	VTAPLEAEYSGLVR	VTAPLEAEYSGLVR	2	VTAPLEAEYSGLVR2	44129.2	34317.8	39726.1
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	VTAPQPAATNGDLASR	VTAPQPAATNGDLASR	2	VTAPQPAATNGDLASR2	55081.2	59243.2	48273.2
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	VTAPQPAATNGDLASR	VTAPQPAATNGDLASR	3	VTAPQPAATNGDLASR3	3124.12	2424.39	5307.77
O35763	O35763	MOES_RAT	Msn	Moesin	1	VTAQDVR	VTAQDVR	2	VTAQDVR2	492012	504458	
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VTAQGPGLEPSGNIANK	VTAQGPGLEPSGNIANK	2	VTAQGPGLEPSGNIANK2	5.59469e+06	5.18803e+06	6.01709e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VTAQGPGLEPSGNIANK	VTAQGPGLEPSGNIANK	3	VTAQGPGLEPSGNIANK3	1.38246e+06	1.40369e+06	1.88805e+06
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	VTAQPVER	VTAQPVER	2	VTAQPVER2	200088	182266	209301
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	VTASECIQEQSFVIR	VTASEC(UniMod:4)IQEQSFVIR	2	VTASEC(UniMod:4)IQEQSFVIR2	33311.8	29299.9	26182.8
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	VTASECIQEQSFVIR	VTASEC(UniMod:4)IQEQSFVIR	3	VTASEC(UniMod:4)IQEQSFVIR3	20382.2	16972.8	9900.74
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	VTASEPLETLGSEGALSPGGVASLLK	VTASEPLETLGSEGALSPGGVASLLK	3	VTASEPLETLGSEGALSPGGVASLLK3	4.10815e+06	5.3442e+06	5.09572e+06
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	VTASEPLETLGSEGALSPGGVASLLK	VTASEPLETLGSEGALSPGGVASLLK	4	VTASEPLETLGSEGALSPGGVASLLK4	57012.1	29030.8	32174.4
P08649	P08649	CO4_RAT	C4	Complement C4	1	VTASEPLETLGSEGALSPGGVASLLR	VTASEPLETLGSEGALSPGGVASLLR	3	VTASEPLETLGSEGALSPGGVASLLR3	2.21608e+07	3.12115e+07	29368.1
P08649	P08649	CO4_RAT	C4	Complement C4	1	VTASEPLETLGSEGALSPGGVASLLR	VTASEPLETLGSEGALSPGGVASLLR	4	VTASEPLETLGSEGALSPGGVASLLR4	222579	230411	244030
P08649	P08649	CO4_RAT	C4	Complement C4	1	VTASEPLETLGSEGALSPGGVASLLRLPR	VTASEPLETLGSEGALSPGGVASLLRLPR	3	VTASEPLETLGSEGALSPGGVASLLRLPR3	98957.6	151821	203412
Q924S4	Q924S4	KREM1_RAT	Kremen1	Kremen protein 1	1	VTASGDLR	VTASGDLR	2	VTASGDLR2	19047.7	14624.3	13624.6
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	VTASLAQSR	VTASLAQSR	2	VTASLAQSR2	177598	167467	151123
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	VTASLLGSPSK	VTASLLGSPSK	2	VTASLLGSPSK2	75269	79440	106179
P23785	P23785	GRN_RAT	Grn	Progranulin	1	VTASLSLPDPQILK	VTASLSLPDPQILK	2	VTASLSLPDPQILK2	2906.65	6123.16	3146.94
D3ZWA1	D3ZWA1	D3ZWA1_RAT	Mindy2	Ubiquitin carboxyl-terminal hydrolase	1	VTASPELAEAAAGR	VTASPELAEAAAGR	2	VTASPELAEAAAGR2	70760.6	89459.5	72494.5
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	VTASPQSLCGLR	VTASPQSLC(UniMod:4)GLR	2	VTASPQSLC(UniMod:4)GLR2	384111	2.45543e+08	1.81487e+08
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	VTASPQSLCGLR	VTASPQSLC(UniMod:4)GLR	3	VTASPQSLC(UniMod:4)GLR3	3.29296e+06	3.20926e+06	3.28221e+06
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	VTASQLSAPSDK	VTASQLSAPSDK	2	VTASQLSAPSDK2	21845.8	42512.8	41610.9
Q66HG9	Q66HG9	MAVS_RAT	Mavs	Mitochondrial antiviral-signaling protein	1	VTASVAK	VTASVAK	1	VTASVAK1	3275.08		5751.79
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	VTASVYIPAHGR	VTASVYIPAHGR	3	VTASVYIPAHGR3	26613.8	23619.6	28103.8
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	VTATDSGSPPLR	VTATDSGSPPLR	2	VTATDSGSPPLR2	23467.2	27941.7	16495.7
D3ZVM5	D3ZVM5	D3ZVM5_RAT	Hspa12b	Heat shock protein family A (Hsp70) member 12B	1	VTAVDVSTNR	VTAVDVSTNR	2	VTAVDVSTNR2	6764.55	3469.84	7296.44
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	VTAVDWHFEEAVDGECPPQR	VTAVDWHFEEAVDGEC(UniMod:4)PPQR	3	VTAVDWHFEEAVDGEC(UniMod:4)PPQR3	16206.1	12220.1	14448.9
A0A8I6AZI9	A0A8I6AZI9	A0A8I6AZI9_RAT	Ubash3a	Ubiquitin associated and SH3 domain containing, A	1	VTAVFASPALR	VTAVFASPALR	2	VTAVFASPALR2	4950.42	5153.85	7926.03
P09330	P09330;A0A0G2JSV3;M0RBK1;P60892	PRPS2_RAT	Prps2	Ribose-phosphate pyrophosphokinase 2	0	VTAVIPCFPYAR	VTAVIPC(UniMod:4)FPYAR	2	VTAVIPC(UniMod:4)FPYAR2	148721	134762	146769
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	VTAVNEVGK	VTAVNEVGK	2	VTAVNEVGK2	60401.9	84529.7	62695.3
Q6P752	Q6P752	TOIP2_RAT	Tor1aip2	Torsin-1A-interacting protein 2	1	VTAVSIDGAER	VTAVSIDGAER	2	VTAVSIDGAER2	37561	38437.5	30310
D3ZUX7	D3ZUX7	D3ZUX7_RAT	Acsf3	Acyl-CoA synthetase family member 3	1	VTAVVALQEGHSLSHR	VTAVVALQEGHSLSHR	3	VTAVVALQEGHSLSHR3	5835.32		9065.7
F7ETI3	F7ETI3	F7ETI3_RAT	Wdr41	WD repeat domain 41	1	VTCFQSTVK	VTC(UniMod:4)FQSTVK	2	VTC(UniMod:4)FQSTVK2	12061.9	11854.1	12369.5
A0A8I6AC38	A0A8I6AC38	A0A8I6AC38_RAT	Wnk2	non-specific serine/threonine protein kinase	1	VTCGIKPASFEK	VTC(UniMod:4)GIKPASFEK	3	VTC(UniMod:4)GIKPASFEK3	4772.41	5703.09	4487.61
Q3KRE2	Q3KRE2	Q3KRE2_RAT	Mettl7a	Methyltransferase like 7A	1	VTCIDPNPNFEK	VTC(UniMod:4)IDPNPNFEK	2	VTC(UniMod:4)IDPNPNFEK2	54545.2	51502.6	44166.9
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	VTCLCAQFEAVLQHGMK	VTC(UniMod:4)LC(UniMod:4)AQFEAVLQHGMK	3	VTC(UniMod:4)LC(UniMod:4)AQFEAVLQHGMK3	1793.67	3321.18	9448.6
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	VTCLLYPHQVSAR	VTC(UniMod:4)LLYPHQVSAR	3	VTC(UniMod:4)LLYPHQVSAR3	31733.4	30051.2	29676
B0BNL6	B0BNL6	ARRD1_RAT	Arrdc1	Arrestin domain-containing protein 1	1	VTCMGSCGVSNK	VTC(UniMod:4)MGSC(UniMod:4)GVSNK	2	VTC(UniMod:4)MGSC(UniMod:4)GVSNK2	2914.4	4244.07	3572.82
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	VTCNMGK	VTC(UniMod:4)NMGK	1	VTC(UniMod:4)NMGK1			2534.81
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	VTCNMGK	VTC(UniMod:4)NMGK	2	VTC(UniMod:4)NMGK2			525292
D3ZZ26	D3ZZ26	D3ZZ26_RAT	Ppp1r3d	Protein phosphatase 1, regulatory subunit 3D	1	VTCSDLGISGTVR	VTC(UniMod:4)SDLGISGTVR	2	VTC(UniMod:4)SDLGISGTVR2	276795	244349	245101
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	VTCTTSPMDVSFAEAR	VTC(UniMod:4)TTSPMDVSFAEAR	2	VTC(UniMod:4)TTSPMDVSFAEAR2	24857.9	33729.1	29710.5
A0A8I5ZJB6	A0A8I5ZJB6	A0A8I5ZJB6_RAT	Tbcd	Tubulin-specific chaperone D	1	VTCTTSPMDVSFAEAR	VTC(UniMod:4)TTSPMDVSFAEAR	3	VTC(UniMod:4)TTSPMDVSFAEAR3	7642.78	9129.56	3312.25
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	VTCVSTGSTTVR	VTC(UniMod:4)VSTGSTTVR	2	VTC(UniMod:4)VSTGSTTVR2	14190.8	11433.8	14415.9
P20760	P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	1	VTCVVVDISQNDPEVR	VTC(UniMod:4)VVVDISQNDPEVR	2	VTC(UniMod:4)VVVDISQNDPEVR2	1.11859e+06	814510	850533
P20760	P20760	IGG2A_RAT	Igg-2a	Ig gamma-2A chain C region	1	VTCVVVDISQNDPEVR	VTC(UniMod:4)VVVDISQNDPEVR	3	VTC(UniMod:4)VVVDISQNDPEVR3	504120	428289	381884
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	VTCVVVDVSEEEPDVQFSWFVDNVR	VTC(UniMod:4)VVVDVSEEEPDVQFSWFVDNVR	4	VTC(UniMod:4)VVVDVSEEEPDVQFSWFVDNVR4	7328.53	10710.4	6916.4
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	VTCYIDQLNTWYDMK	VTC(UniMod:4)YIDQLNTWYDMK	2	VTC(UniMod:4)YIDQLNTWYDMK2	15525.8	1547.02	3745.66
Q4QQS7	Q4QQS7	Q4QQS7_RAT	Umps	Uridine 5'-monophosphate synthase	1	VTDAIVLLDR	VTDAIVLLDR	2	VTDAIVLLDR2	4159.38	2291.54	
P63039	P63039	CH60_RAT	Hspd1	60 kDa heat shock protein, mitochondrial	1	VTDALNATR	VTDALNATR	2	VTDALNATR2	1.07078e+06	1.22496e+06	1.25612e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	VTDATETTITISWR	VTDATETTITISWR	2	VTDATETTITISWR2	52175	94841.5	156842
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	VTDATETTITISWR	VTDATETTITISWR	3	VTDATETTITISWR3	924790	1.09278e+06	809291
G3V719	G3V719	G3V719_RAT	Plscr4	Phospholipid scramblase	1	VTDCLGR	VTDC(UniMod:4)LGR	2	VTDC(UniMod:4)LGR2	25367.9	20717.1	23974.4
P45953	P45953	ACADV_RAT	Acadvl	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	1	VTDECIQIMGGMGFMK	VTDEC(UniMod:4)IQIMGGMGFMK	2	VTDEC(UniMod:4)IQIMGGMGFMK2	5577.4	7846.75	3409.72
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VTDFGDKVEDPTFLNQLQSGVNR	VTDFGDKVEDPTFLNQLQSGVNR	3	VTDFGDKVEDPTFLNQLQSGVNR3	38330.4	38651.2	35347.3
Q63357	Q63357	MYO1D_RAT	Myo1d	Unconventional myosin-Id	1	VTDGMFLEALNSK	VTDGMFLEALNSK	2	VTDGMFLEALNSK2	2851.66		3026.42
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	VTDGVSQQAATGVEAEDLER	VTDGVSQQAATGVEAEDLER	3	VTDGVSQQAATGVEAEDLER3	21704	30571.4	35131.7
A0A8I5ZP57	A0A8I5ZP57	A0A8I5ZP57_RAT	Pkdcc	Protein kinase domain containing, cytoplasmic	1	VTDLDDAR	VTDLDDAR	2	VTDLDDAR2	38769.5	39229.3	59803.9
O35094	O35094	TIM44_RAT	Timm44	Mitochondrial import inner membrane translocase subunit TIM44	1	VTDLLGGLFSK	VTDLLGGLFSK	2	VTDLLGGLFSK2	45798.7	36912.2	35687.4
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	VTDLLNCDIMMHILR	VTDLLNC(UniMod:4)DIMMHILR	3	VTDLLNC(UniMod:4)DIMMHILR3	2663.27	4610.16	4623.43
G3V9M3	G3V9M3	G3V9M3_RAT	Wdr47	WD repeat domain 47	1	VTDLQGDLTK	VTDLQGDLTK	2	VTDLQGDLTK2	11868.9	10370.6	9531.81
Q4V897	Q4V897	CC90B_RAT	Ccdc90b	Coiled-coil domain-containing protein 90B, mitochondrial	1	VTDMFTDQEK	VTDMFTDQEK	2	VTDMFTDQEK2	23386.8	14968.4	30021.1
Q05030	Q05030	PGFRB_RAT	Pdgfrb	Platelet-derived growth factor receptor beta	1	VTDPQLEVTLHEK	VTDPQLEVTLHEK	2	VTDPQLEVTLHEK2	1462.11		1603.83
Q05030	Q05030	PGFRB_RAT	Pdgfrb	Platelet-derived growth factor receptor beta	1	VTDPQLEVTLHEK	VTDPQLEVTLHEK	3	VTDPQLEVTLHEK3	39139.4	32866.3	38161.2
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	VTDPSVAK	VTDPSVAK	2	VTDPSVAK2	98028	96017.5	81956.8
Q5BK32	Q5BK32	FAF2_RAT	Faf2	FAS-associated factor 2	1	VTDPVGDIVSFMHSFEEK	VTDPVGDIVSFMHSFEEK	3	VTDPVGDIVSFMHSFEEK3	15061.8	16057.7	16584.4
Q66H09	Q66H09	Q66H09_RAT	Ttc1	Tetratricopeptide repeat domain 1	1	VTDSQETESASSLVSDPK	VTDSQETESASSLVSDPK	2	VTDSQETESASSLVSDPK2	8931.16	7243.8	9368.45
Q66H09	Q66H09	Q66H09_RAT	Ttc1	Tetratricopeptide repeat domain 1	1	VTDSQETESASSLVSDPK	VTDSQETESASSLVSDPK	3	VTDSQETESASSLVSDPK3	10895.9	7904.07	11259.2
B2GV54	B2GV54	NCEH1_RAT	Nceh1	Neutral cholesterol ester hydrolase 1	1	VTDTDFDGVEVR	VTDTDFDGVEVR	2	VTDTDFDGVEVR2	162382	151024	198657
A0A8I6A9K9	A0A8I6A9K9	A0A8I6A9K9_RAT	Hypk	Huntingtin interacting protein K	1	VTDYAEEK	VTDYAEEK	2	VTDYAEEK2	30392.2	16078.3	21745.2
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	VTDYIAEK	VTDYIAEK	2	VTDYIAEK2		43438.6	28971.4
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	VTECGWAVR	VTEC(UniMod:4)GWAVR	2	VTEC(UniMod:4)GWAVR2	47111.3	70315.3	55843.6
A0A8I6APG6	A0A8I6APG6	A0A8I6APG6_RAT	ENSRNOG00000062438	Importin 11	1	VTEDEEPPTEQDK	VTEDEEPPTEQDK	2	VTEDEEPPTEQDK2	27528.6	21138.1	19809.9
A0A8I6APG6	A0A8I6APG6	A0A8I6APG6_RAT	ENSRNOG00000062438	Importin 11	1	VTEDEEPPTEQDKR	VTEDEEPPTEQDKR	3	VTEDEEPPTEQDKR3	10024.9	10297.5	12650.1
A0A0G2JUF9	A0A0G2JUF9	A0A0G2JUF9_RAT	Nckap1l	NCK associated protein 1 like	1	VTEDLFSSLK	VTEDLFSSLK	2	VTEDLFSSLK2	45904.2	50193.4	48056.6
P20909	P20909	COBA1_RAT	Col11a1	Collagen alpha-1(XI) chain	1	VTEEAQISAPTK	VTEEAQISAPTK	2	VTEEAQISAPTK2	56306.5	72769.5	70715.1
A0A8I5YCC4	A0A8I5YCC4	A0A8I5YCC4_RAT	Rcsd1	RCSD domain containing 1	1	VTEEEDGLGQK	VTEEEDGLGQK	2	VTEEEDGLGQK2	4420.13	5844.29	9570.64
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	VTEELAAATAQVSHLQLK	VTEELAAATAQVSHLQLK	3	VTEELAAATAQVSHLQLK3	10520.9		11292.7
B2RYI2	B2RYI2	B2RYI2_RAT	Srp68	Signal recognition particle subunit SRP68	1	VTEELLTDSR	VTEELLTDSR	2	VTEELLTDSR2	3763.75	8745.17	4285.76
B4F767	B4F767	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	1	VTEENKEEYIMLLTDWR	VTEENKEEYIMLLTDWR	3	VTEENKEEYIMLLTDWR3	1942.15	3411.24	4971.84
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	VTEENRELASELR	VTEENRELASELR	2	VTEENRELASELR2	134093	161925	143444
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	VTEENRELASELR	VTEENRELASELR	3	VTEENRELASELR3	1.1212e+07	1.55914e+07	1.46216e+07
Q5RKH6	Q5RKH6	OS9_RAT	Os9	Protein OS-9	1	VTEEVQDTDHQVWSGSK	VTEEVQDTDHQVWSGSK	3	VTEEVQDTDHQVWSGSK3	20888.1	9722.64	14699.1
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	VTEFDAVR	VTEFDAVR	2	VTEFDAVR2	29708.7	35702.1	36808.1
Q5M7W5	Q5M7W5	MAP4_RAT	Map4	Microtubule-associated protein 4	1	VTEFNNVTPLSEEEVASIK	VTEFNNVTPLSEEEVASIK	3	VTEFNNVTPLSEEEVASIK3	10792	14283.3	8836.12
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	VTEGGEPYR	VTEGGEPYR	2	VTEGGEPYR2	729419	830861	624980
Q7TP47	Q7TP47	HNRPQ_RAT	Syncrip	Heterogeneous nuclear ribonucleoprotein Q	1	VTEGLTDVILYHQPDDK	VTEGLTDVILYHQPDDK	2	VTEGLTDVILYHQPDDK2	1932.87	3693.14	
Q7TP47	Q7TP47	HNRPQ_RAT	Syncrip	Heterogeneous nuclear ribonucleoprotein Q	1	VTEGLTDVILYHQPDDK	VTEGLTDVILYHQPDDK	3	VTEGLTDVILYHQPDDK3	28469.7	31677.7	17789.6
Q7TP47	Q7TP47	HNRPQ_RAT	Syncrip	Heterogeneous nuclear ribonucleoprotein Q	1	VTEGLTDVILYHQPDDKK	VTEGLTDVILYHQPDDKK	4	VTEGLTDVILYHQPDDKK4	8233.33	4840.42	5665.93
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	VTEGTIREEQEYEEELEEEPGQGAK	VTEGTIREEQEYEEELEEEPGQGAK	3	VTEGTIREEQEYEEELEEEPGQGAK3	4378.36	6777.9	5175.41
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	VTEHNETILFK	VTEHNETILFK	3	VTEHNETILFK3	42020.9	54256.9	46350.1
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	VTEIIMQK	VTEIIMQK	2	VTEIIMQK2	13265.9	10894.2	
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	VTELEGQLK	VTELEGQLK	2	VTELEGQLK2	28459	13009.1	21750.3
B2GUX8	B2GUX8	B2GUX8_RAT	Sh3bp5l	SH3 domain-binding protein 5	1	VTELEQQVAQAK	VTELEQQVAQAK	2	VTELEQQVAQAK2	9860.69	8378.69	14786.1
B2GUX8	B2GUX8	B2GUX8_RAT	Sh3bp5l	SH3 domain-binding protein 5	1	VTELEQQVAQAK	VTELEQQVAQAK	3	VTELEQQVAQAK3	3661.29	1471.88	
Q9JLH7	Q9JLH7	CK5P3_RAT	Cdk5rap3	CDK5 regulatory subunit-associated protein 3	1	VTELLQQK	VTELLQQK	2	VTELLQQK2	60445.7	56310.4	50297.6
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	VTELVQQVTGQKPKPGLR	VTELVQQVTGQKPKPGLR	4	VTELVQQVTGQKPKPGLR4	32402.8	26700.5	26551
Q0Z843	Q0Z843	Q0Z843_RAT	Fig4	FIG4 phosphoinositide 5-phosphatase	1	VTESVAQPMK	VTESVAQPMK	2	VTESVAQPMK2	7955.01	9328.91	7095.11
Q9JHW5	Q9JHW5	VAMP7_RAT	Vamp7	Vesicle-associated membrane protein 7	1	VTETQAQVDELK	VTETQAQVDELK	2	VTETQAQVDELK2	154196	150443	154191
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	VTETVMNGGMK	VTETVMNGGMK	2	VTETVMNGGMK2	28869	27454.2	28512.6
A0A0G2KAF4	A0A0G2KAF4	A0A0G2KAF4_RAT	Nfxl1	Nuclear transcription factor, X-box binding-like 1	1	VTEVDGCPGR	VTEVDGC(UniMod:4)PGR	2	VTEVDGC(UniMod:4)PGR2	12302.3	12218.7	12849.2
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	VTEVIPK	VTEVIPK	2	VTEVIPK2	207790	182639	207398
A0A1W2Q642	A0A1W2Q642	A0A1W2Q642_RAT	Pi16	Peptidase inhibitor 16	1	VTEVPGSR	VTEVPGSR	2	VTEVPGSR2	82213.8	77300.4	73329.5
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	VTEVVVK	VTEVVVK	1	VTEVVVK1	494394	384117	317231
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	VTEVVVK	VTEVVVK	2	VTEVVVK2	89173.6	84911.2	69122.4
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	VTEYLIMYTPTHADGLEMQFR	VTEYLIMYTPTHADGLEMQFR	3	VTEYLIMYTPTHADGLEMQFR3	465685	523006	458878
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	VTEYLIMYTPTHADGLEMQFR	VTEYLIMYTPTHADGLEMQFR	4	VTEYLIMYTPTHADGLEMQFR4	20956.3	17183.2	13112.3
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	VTFCHLPFQSK	VTFC(UniMod:4)HLPFQSK	3	VTFC(UniMod:4)HLPFQSK3	79115.3	43137.9	51122.9
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	VTFDPTSSYTLEDLKPDTLYHFQLAAR	VTFDPTSSYTLEDLKPDTLYHFQLAAR	4	VTFDPTSSYTLEDLKPDTLYHFQLAAR4	5106.08	5491.41	3486.27
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	VTFEIHK	VTFEIHK	2	VTFEIHK2	10919.4		9110.91
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	VTFEIYDPNLAFLR	VTFEIYDPNLAFLR	2	VTFEIYDPNLAFLR2	54204.1	93889	48337.4
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	VTFEVFVQADAPHGVAWDSK	VTFEVFVQADAPHGVAWDSK	3	VTFEVFVQADAPHGVAWDSK3	3410.69		3056.71
P24368	P24368	PPIB_RAT	Ppib	Peptidyl-prolyl cis-trans isomerase B	1	VTFGLFGK	VTFGLFGK	2	VTFGLFGK2	384900	320743	340329
Q5GF25	Q5GF25	MANEA_RAT	Manea	Glycoprotein endo-alpha-1,2-mannosidase	1	VTFHIEPYSNR	VTFHIEPYSNR	3	VTFHIEPYSNR3	9248.49	4755.99	4870.81
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	VTFHSDYSNEK	VTFHSDYSNEK	2	VTFHSDYSNEK2	27886.5	28750.7	30963.1
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	VTFHSDYSNEK	VTFHSDYSNEK	3	VTFHSDYSNEK3	362762	364948	376852
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	VTFHSDYSNEKPFTGFEAFYAAEDVDECR	VTFHSDYSNEKPFTGFEAFYAAEDVDEC(UniMod:4)R	4	VTFHSDYSNEKPFTGFEAFYAAEDVDEC(UniMod:4)R4	327537	281783	332600
F1MAF8	F1MAF8	F1MAF8_RAT	Atg2b	Autophagy related 2B	1	VTFIDTVLR	VTFIDTVLR	2	VTFIDTVLR2	5841.71	6215.36	7475.82
Q68FQ9	Q68FQ9	Q68FQ9_RAT	Lancl2	LanC lantibiotic synthetase component C-like 2 (Bacterial)	1	VTFLCGDAGPLAVGAVIYHK	VTFLC(UniMod:4)GDAGPLAVGAVIYHK	3	VTFLC(UniMod:4)GDAGPLAVGAVIYHK3	11042.1	8113.91	13054.9
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	VTFNQPR	VTFNQPR	2	VTFNQPR2	260235	316867	300126
Q5XIE8	Q5XIE8	ITM2B_RAT	Itm2b	Integral membrane protein 2B	1	VTFNSALAQK	VTFNSALAQK	2	VTFNSALAQK2	10404.2	13800.1	21606.3
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	VTFPECVR	VTFPEC(UniMod:4)VR	2	VTFPEC(UniMod:4)VR2	37521.1	31874.8	25960.1
Q6AXV4	Q6AXV4	SAM50_RAT	Samm50	Sorting and assembly machinery component 50 homolog	1	VTFQFSYGTK	VTFQFSYGTK	2	VTFQFSYGTK2	31204	17885.9	41551
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	VTFSCAAGLGQR	VTFSC(UniMod:4)AAGLGQR	2	VTFSC(UniMod:4)AAGLGQR2	92146.1	107467	97699
A0A8I6ALT5	A0A8I6ALT5	A0A8I6ALT5_RAT	Dok2	Docking protein 2	1	VTFSFEAGR	VTFSFEAGR	2	VTFSFEAGR2	38102.5	29937.6	25762.2
Q9JHY1	Q9JHY1	JAM1_RAT	F11r	Junctional adhesion molecule A	1	VTFSSSGITFSSVTR	VTFSSSGITFSSVTR	2	VTFSSSGITFSSVTR2	139252	160268	150535
Q9JHY1	Q9JHY1	JAM1_RAT	F11r	Junctional adhesion molecule A	1	VTFSSSGITFSSVTR	VTFSSSGITFSSVTR	3	VTFSSSGITFSSVTR3	11929.6	14066.7	14446.7
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	VTFVCNTGYQLK	VTFVC(UniMod:4)NTGYQLK	2	VTFVC(UniMod:4)NTGYQLK2	190822	173620	187949
A0A8I6A0R8	A0A8I6A0R8	A0A8I6A0R8_RAT	Srl	Sarcalumenin	1	VTFVDTPGIIENR	VTFVDTPGIIENR	2	VTFVDTPGIIENR2	8969.28	13604.1	8045.43
Q769K2	Q769K2	NAPEP_RAT	Napepld	N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D	1	VTFVFTPSQHWCK	VTFVFTPSQHWC(UniMod:4)K	3	VTFVFTPSQHWC(UniMod:4)K3	30738.1	29581.7	35907.7
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VTFVNFTVTR	VTFVNFTVTR	2	VTFVNFTVTR2	88092	100257	87376.7
P49432	P49432	ODPB_RAT	Pdhb	Pyruvate dehydrogenase E1 component subunit beta, mitochondrial	1	VTGADVPMPYAK	VTGADVPMPYAK	2	VTGADVPMPYAK2	151842	121480	155005
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VTGDDSMR	VTGDDSMR	1	VTGDDSMR1	48290.1		38391.3
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VTGDDSMR	VTGDDSMR	2	VTGDDSMR2	940351		854165
A2RRU1	A2RRU1	GYS1_RAT	Gys1	Glycogen [starch] synthase, muscle	1	VTGDEWGDNYYLVGPYTEQGVR	VTGDEWGDNYYLVGPYTEQGVR	3	VTGDEWGDNYYLVGPYTEQGVR3		7961.59	6612.36
Q68FQ9	Q68FQ9	Q68FQ9_RAT	Lancl2	LanC lantibiotic synthetase component C-like 2 (Bacterial)	1	VTGDQTYLLR	VTGDQTYLLR	2	VTGDQTYLLR2	19141.7	20365.3	13290.4
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	VTGEEWLVR	VTGEEWLVR	2	VTGEEWLVR2	296179	271500	293794
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	VTGESHIGGVLLK	VTGESHIGGVLLK	2	VTGESHIGGVLLK2	74789.7	50546.5	55164.6
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	VTGESHIGGVLLK	VTGESHIGGVLLK	3	VTGESHIGGVLLK3	1.8187e+06	1.91627e+06	1.74608e+06
Q9Z1E1	Q9Z1E1	FLOT1_RAT	Flot1	Flotillin-1	1	VTGEVLDILSR	VTGEVLDILSR	2	VTGEVLDILSR2	55179.6	49727.4	57223.4
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	VTGEVTDPSGK	VTGEVTDPSGK	2	VTGEVTDPSGK2	112345	110242	125200
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	VTGFLCEPDPVHFSEAMEK	VTGFLC(UniMod:4)EPDPVHFSEAMEK	3	VTGFLC(UniMod:4)EPDPVHFSEAMEK3	57601.1	46541.5	56026
D3ZH14	D3ZH14	D3ZH14_RAT	Tmcc1	Transmembrane and coiled-coil domain family 1	1	VTGFSEGVVDSVK	VTGFSEGVVDSVK	2	VTGFSEGVVDSVK2	1681.24	3612.62	3026.7
A0A8I6AQR3	A0A8I6AQR3	A0A8I6AQR3_RAT	Tmem263	Transmembrane protein 263	1	VTGGIFSVTK	VTGGIFSVTK	2	VTGGIFSVTK2	72559.1	75737.1	67254.6
D3ZUB7	D3ZUB7	D3ZUB7_RAT	Anapc4	Anaphase-promoting complex subunit 4	1	VTGIAGTCIALCLSSDLK	VTGIAGTC(UniMod:4)IALC(UniMod:4)LSSDLK	2	VTGIAGTC(UniMod:4)IALC(UniMod:4)LSSDLK2	2655.15		
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	VTGIITQGAR	VTGIITQGAR	2	VTGIITQGAR2	103600	96506.4	98733
D3ZXK7	D3ZXK7	RN123_RAT	Rnf123	E3 ubiquitin-protein ligase RNF123	1	VTGIVQEK	VTGIVQEK	2	VTGIVQEK2	48131.3	41876.1	37899.3
O88658	O88658	KIF1B_RAT	Kif1b	Kinesin-like protein KIF1B	1	VTGIYELSLCK	VTGIYELSLC(UniMod:4)K	2	VTGIYELSLC(UniMod:4)K2	5629.07	12148.8	10869.2
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	VTGLGGEHK	VTGLGGEHK	2	VTGLGGEHK2	32430.4	33919.6	30406
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	VTGLGTTR	VTGLGTTR	2	VTGLGTTR2	53958.2	64213.7	51349.1
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	VTGLTTSTTELAWDPPVLAER	VTGLTTSTTELAWDPPVLAER	3	VTGLTTSTTELAWDPPVLAER3		23154.7	33174.3
Q63313	Q63313	LBP_RAT	Lbp	Lipopolysaccharide-binding protein	1	VTGMLHPEK	VTGMLHPEK	2	VTGMLHPEK2	5753.94	5134.24	3752.19
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	VTGNQGANIAYPPGSTPTIR	VTGNQGANIAYPPGSTPTIR	3	VTGNQGANIAYPPGSTPTIR3	18950.2	20217.7	14218.1
Q6AXV4	Q6AXV4	SAM50_RAT	Samm50	Sorting and assembly machinery component 50 homolog	1	VTGQFPWSSLR	VTGQFPWSSLR	2	VTGQFPWSSLR2	159778	162420	192196
A0A8I5ZU93	A0A8I5ZU93	A0A8I5ZU93_RAT	Cops7a	COP9 signalosome subunit 7A	1	VTGQNQEQFLLLAK	VTGQNQEQFLLLAK	2	VTGQNQEQFLLLAK2	26921.7	27688.5	32576.6
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	VTGTLQFGELQK	VTGTLQFGELQK	2	VTGTLQFGELQK2	81515.7	91190.9	94578.2
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	VTGTQPITCTWMK	VTGTQPITC(UniMod:4)TWMK	2	VTGTQPITC(UniMod:4)TWMK2	614671	712574	622923
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	VTGTQPITCTWMK	VTGTQPITC(UniMod:4)TWMK	3	VTGTQPITC(UniMod:4)TWMK3	6290.22	3982.52	10206.4
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	VTGVDTDPHFIIYVPTK	VTGVDTDPHFIIYVPTK	2	VTGVDTDPHFIIYVPTK2	5999.28	6971.8	
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	VTGVDTDPHFIIYVPTK	VTGVDTDPHFIIYVPTK	3	VTGVDTDPHFIIYVPTK3	135179	122333	133082
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	VTGVVTQGAR	VTGVVTQGAR	2	VTGVVTQGAR2	434658	521913	494709
P18292	P18292	THRB_RAT	F2	Prothrombin	1	VTGWGNLR	VTGWGNLR	2	VTGWGNLR2	523899	478127	480449
Q6DGF9	Q6DGF9	ACBD4_RAT	Acbd4	Acyl-CoA-binding domain-containing protein 4	1	VTGWQEPAVNR	VTGWQEPAVNR	2	VTGWQEPAVNR2	9772.89	6402.58	8373.4
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	VTHAVVTVPAYFNDAQR	VTHAVVTVPAYFNDAQR	2	VTHAVVTVPAYFNDAQR2	131624	115918	115132
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	VTHAVVTVPAYFNDAQR	VTHAVVTVPAYFNDAQR	3	VTHAVVTVPAYFNDAQR3	2.13495e+06	2.11635e+06	2.04676e+06
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	VTHDMDMCYGMMGSLFR	VTHDMDMC(UniMod:4)YGMMGSLFR	3	VTHDMDMC(UniMod:4)YGMMGSLFR3	39508.8	53795	52235.3
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	VTHELQAMK	VTHELQAMK	2	VTHELQAMK2	11289.8	9977.54	8552.25
Q63569	Q63569	PRS6A_RAT	Psmc3	26S proteasome regulatory subunit 6A	1	VTHELQAMKDK	VTHELQAMKDK	3	VTHELQAMKDK3	24166.4	37448.1	22318.4
Q91Y78	Q91Y78	UCHL3_RAT	Uchl3	Ubiquitin carboxyl-terminal hydrolase isozyme L3	1	VTHETSAHEGQTEAPSIDEK	VTHETSAHEGQTEAPSIDEK	4	VTHETSAHEGQTEAPSIDEK4	12802.5	9292.12	5018.12
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	VTHEVAEELSPR	VTHEVAEELSPR	2	VTHEVAEELSPR2	16017.3	24053.1	
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	VTHEVAEELSPR	VTHEVAEELSPR	3	VTHEVAEELSPR3	14772.9	27344.5	20888.4
F1LNS2	F1LNS2	F1LNS2_RAT	Dennd10	DENN domain containing 10	1	VTHFSIVLTAK	VTHFSIVLTAK	3	VTHFSIVLTAK3	1828.36		
O35952	O35952	GLO2_RAT	Hagh	Hydroxyacylglutathione hydrolase, mitochondrial	1	VTHLSTLEVGSLSVK	VTHLSTLEVGSLSVK	3	VTHLSTLEVGSLSVK3	5208.41	6893.54	4254.46
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	VTHTGIFTLYSYR	VTHTGIFTLYSYR	3	VTHTGIFTLYSYR3		3758.89	4764.85
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	VTHVMIR	VTHVMIR	2	VTHVMIR2	48667.5	10944.3	46421.7
Q3KR92	Q3KR92	TPST1_RAT	Tpst1	Protein-tyrosine sulfotransferase 1	1	VTIAGFDLNSYR	VTIAGFDLNSYR	2	VTIAGFDLNSYR2	9728.03	9919.01	8009.32
Q5RJS8	Q5RJS8	TPST2_RAT	Tpst2	Protein-tyrosine sulfotransferase 2	1	VTIAGFDLSSYR	VTIAGFDLSSYR	2	VTIAGFDLSSYR2	77367.3	69601.6	78650
A9UMV8;P02262;P0C169;P0C170;P0CC09;Q00728;Q4FZT6;Q64598	Q00728;Q64598;D3ZVK7;Q4FZT6;P0C169;P0C170;A9UMV8;A0A8I6AWT3;P02262;G3V9C0;A0A8I5ZYY0;M0RDM4;Q6I8Q6;P0CC09;A0A8I6ARS7;A0A8L2QLK6	H2A1C_RAT;H2A1E_RAT;H2A1F_RAT;H2A1_RAT;H2A2A_RAT;H2A3_RAT;H2A4_RAT;H2AJ_RAT	H2ac18;H2ac25;H2aj	Histone H2A.J	0	VTIAQGGVLPNIQAVLLPK	VTIAQGGVLPNIQAVLLPK	2	VTIAQGGVLPNIQAVLLPK2	58759.1	36348.9	26916.7
A9UMV8;P02262;P0C169;P0C170;P0CC09;Q00728;Q4FZT6;Q64598	Q00728;Q64598;D3ZVK7;Q4FZT6;P0C169;P0C170;A9UMV8;A0A8I6AWT3;P02262;G3V9C0;A0A8I5ZYY0;M0RDM4;Q6I8Q6;P0CC09;A0A8I6ARS7;A0A8L2QLK6	H2A1C_RAT;H2A1E_RAT;H2A1F_RAT;H2A1_RAT;H2A2A_RAT;H2A3_RAT;H2A4_RAT;H2AJ_RAT	H2ac18;H2ac25;H2aj	Histone H2A.J	0	VTIAQGGVLPNIQAVLLPK	VTIAQGGVLPNIQAVLLPK	3	VTIAQGGVLPNIQAVLLPK3	10794.7	9291.47	7227.63
Q5BJZ3	Q5BJZ3	Q5BJZ3_RAT	Nnt	proton-translocating NAD(P)(+) transhydrogenase	1	VTIAQGYDALSSMANISGYK	VTIAQGYDALSSMANISGYK	3	VTIAQGYDALSSMANISGYK3	28061.2	27320.7	23703.5
B5DEP5	B5DEP5	B5DEP5_RAT	Trip4	Thyroid hormone receptor interactor 4	1	VTIDFAGR	VTIDFAGR	2	VTIDFAGR2	26763.7	14059.6	16697.5
Q9JLJ3	Q9JLJ3	AL9A1_RAT	Aldh9a1	4-trimethylaminobutyraldehyde dehydrogenase	1	VTIEYYSQLK	VTIEYYSQLK	2	VTIEYYSQLK2	62395.5	60310	46189.9
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	VTIFAEGCHGHLAK	VTIFAEGC(UniMod:4)HGHLAK	3	VTIFAEGC(UniMod:4)HGHLAK3	35573.4	23648.2	19169.3
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	VTIFAEGCHGHLAK	VTIFAEGC(UniMod:4)HGHLAK	4	VTIFAEGC(UniMod:4)HGHLAK4	87375.6	63299.2	62133
P08650	P08650	CO5_RAT	C5	Complement C5	1	VTIGPHCIR	VTIGPHC(UniMod:4)IR	2	VTIGPHC(UniMod:4)IR2	43529.2	39555.3	37325.4
P01026	P01026	CO3_RAT	C3	Complement C3	1	VTIKPAPETAK	VTIKPAPETAK	2	VTIKPAPETAK2	587884	474535	370935
P01026	P01026	CO3_RAT	C3	Complement C3	1	VTIKPAPETAK	VTIKPAPETAK	3	VTIKPAPETAK3	6.15687e+06	5.64456e+06	5.62803e+06
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	VTILGHVQR	VTILGHVQR	2	VTILGHVQR2	30606.9	29248.7	26164.9
P22734	P22734	COMT_RAT	Comt	Catechol O-methyltransferase	1	VTILNGASQDLIPQLK	VTILNGASQDLIPQLK	2	VTILNGASQDLIPQLK2	71691.4	81981.9	80649.9
P22734	P22734	COMT_RAT	Comt	Catechol O-methyltransferase	1	VTILNGASQDLIPQLK	VTILNGASQDLIPQLK	3	VTILNGASQDLIPQLK3	26539.6	29965	25208.6
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	VTIMWTPPNSAVTGYR	VTIMWTPPNSAVTGYR	2	VTIMWTPPNSAVTGYR2	245815	320003	282524
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	VTIMWTPPNSAVTGYR	VTIMWTPPNSAVTGYR	3	VTIMWTPPNSAVTGYR3	8.07905e+06	1.00294e+07	9.78561e+06
E9PU15	E9PU15	E9PU15_RAT	Dicer1	Endoribonuclease Dicer	1	VTINTAIGHINR	VTINTAIGHINR	3	VTINTAIGHINR3	11016.3	10998	5478.36
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VTIPGNYYQQMCGLCGDYNGDPK	VTIPGNYYQQMC(UniMod:4)GLC(UniMod:4)GDYNGDPK	3	VTIPGNYYQQMC(UniMod:4)GLC(UniMod:4)GDYNGDPK3	57237	53195.8	78622.7
P58751	P58751	RELN_RAT	Reln	Reelin	1	VTIPLPNAALTR	VTIPLPNAALTR	2	VTIPLPNAALTR2	657262	668177	723836
P58751	P58751	RELN_RAT	Reln	Reelin	1	VTIPLPNAALTR	VTIPLPNAALTR	3	VTIPLPNAALTR3	3171.26	3439.14	3665.12
A0A8I5ZU98	A0A8I5ZU98	A0A8I5ZU98_RAT	Osbpl5	Oxysterol-binding protein	1	VTIQCEK	VTIQC(UniMod:4)EK	2	VTIQC(UniMod:4)EK2	9397.12	6000.37	6369.62
Q91XJ1	Q91XJ1	BECN1_RAT	Becn1	Beclin-1	1	VTIQELTAPLLTTAQAK	VTIQELTAPLLTTAQAK	2	VTIQELTAPLLTTAQAK2	15235.6	12060.2	10591.4
Q91XJ1	Q91XJ1	BECN1_RAT	Becn1	Beclin-1	1	VTIQELTAPLLTTAQAK	VTIQELTAPLLTTAQAK	3	VTIQELTAPLLTTAQAK3	7207.28	9523.5	12520.7
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	VTISLLSLDDPQR	VTISLLSLDDPQR	2	VTISLLSLDDPQR2	1.12985e+06	992112	908774
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	VTISLLSLDDPQR	VTISLLSLDDPQR	3	VTISLLSLDDPQR3	18873.1	21392.8	27219.4
P28073	P28073;A0A0G2JSL0	PSB6_RAT	Psmb6	Proteasome subunit beta type-6	0	VTISTLPPP	VTISTLPPP	1	VTISTLPPP1	602748	486736	573486
P28073	P28073;A0A0G2JSL0	PSB6_RAT	Psmb6	Proteasome subunit beta type-6	0	VTISTLPPP	VTISTLPPP	2	VTISTLPPP2	702034	800244	860228
A0A8I6AW41	A0A8I6AW41	A0A8I6AW41_RAT	ENSRNOG00000063859	Ig-like domain-containing protein	1	VTITCQASQDIGNNLIWFQQK	VTITC(UniMod:4)QASQDIGNNLIWFQQK	3	VTITC(UniMod:4)QASQDIGNNLIWFQQK3		3921.42	9168.63
A0A8I6AW41	A0A8I6AW41	A0A8I6AW41_RAT	ENSRNOG00000063859	Ig-like domain-containing protein	1	VTITCQASQDIGNNLIWFQQKPGK	VTITC(UniMod:4)QASQDIGNNLIWFQQKPGK	3	VTITC(UniMod:4)QASQDIGNNLIWFQQKPGK3	8918.24	5830.68	11678.5
A0A8I6AW41	A0A8I6AW41	A0A8I6AW41_RAT	ENSRNOG00000063859	Ig-like domain-containing protein	1	VTITCQASQDIGNNLIWFQQKPGK	VTITC(UniMod:4)QASQDIGNNLIWFQQKPGK	4	VTITC(UniMod:4)QASQDIGNNLIWFQQKPGK4	13467.5	6208.55	12620.7
A0A8I6A4N7;A0A8I6GDH0	A0A8I6GDH0;A0A8I6A4N7	A0A8I6A4N7_RAT;A0A8I6GDH0_RAT	ENSRNOG00000068921;ENSRNOG00000069405	Ig-like domain-containing protein	0	VTITCQASQNINK	VTITC(UniMod:4)QASQNINK	2	VTITC(UniMod:4)QASQNINK2	85604.7	78426.7	64548.3
A0A8I6AMS5	A0A8I6AMS5	A0A8I6AMS5_RAT	ENSRNOG00000068441	Ig-like domain-containing protein	1	VTITCRASQDIGNYLSWFQQK	VTITC(UniMod:4)RASQDIGNYLSWFQQK	3	VTITC(UniMod:4)RASQDIGNYLSWFQQK3	10975	8359.44	7163.35
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	VTITDFNSVPEEDGTR	VTITDFNSVPEEDGTR	2	VTITDFNSVPEEDGTR2	135640	129075	116715
P59996	P59996	PCSK9_RAT	Pcsk9	Proprotein convertase subtilisin/kexin type 9	1	VTITDFNSVPEEDGTR	VTITDFNSVPEEDGTR	3	VTITDFNSVPEEDGTR3	59198.8	56193.6	58146.8
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	VTITFTTDESGNHTGWK	VTITFTTDESGNHTGWK	2	VTITFTTDESGNHTGWK2	3488.2	6470.7	5948.44
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	VTITFTTDESGNHTGWK	VTITFTTDESGNHTGWK	3	VTITFTTDESGNHTGWK3	48175.5	52266	37509.8
F1MAH6	F1MAH6	F1MAH6_RAT	Cdh11	Cadherin 11	1	VTITLTDVNDNPPK	VTITLTDVNDNPPK	2	VTITLTDVNDNPPK2	8315.2	5674.98	5634.2
D3ZRJ7	D3ZRJ7	D3ZRJ7_RAT	Lrrk1	non-specific serine/threonine protein kinase	1	VTIYSFTGNQR	VTIYSFTGNQR	2	VTIYSFTGNQR2	5013.85	6321.87	4522.93
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	VTIYSQAADGTEGQPGNK	VTIYSQAADGTEGQPGNK	2	VTIYSQAADGTEGQPGNK2	187509	186523	190977
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	VTIYSQAADGTEGQPGNK	VTIYSQAADGTEGQPGNK	3	VTIYSQAADGTEGQPGNK3	138780	152660	145850
A0A8I6AP98	A0A0G2K8S3;A0A8I6AP98	A0A8I6AP98_RAT	Mettl27	Methyltransferase like 27	0	VTKPGGLVCLTTR	VTKPGGLVC(UniMod:4)LTTR	3	VTKPGGLVC(UniMod:4)LTTR3		64110.6	100949
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VTKPLDR	VTKPLDR	2	VTKPLDR2	24073.8		25375.6
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VTKPLDRETISGYTLTVQAADNGNPPR	VTKPLDRETISGYTLTVQAADNGNPPR	4	VTKPLDRETISGYTLTVQAADNGNPPR4	5654.1	5523.51	3557.97
B5DEH2	B5DEH2	ERLN2_RAT	Erlin2	Erlin-2	1	VTKPNIPEAIR	VTKPNIPEAIR	3	VTKPNIPEAIR3	112408	107801	117137
D4ADV8	Q9WVB9;D4ADV8	D4ADV8_RAT	Dvl3	Dishevelled segment polarity protein 3	0	VTLADFK	VTLADFK	2	VTLADFK2	11049.9	14288.8	10357.8
Q5I0D1	Q5I0D1	GLOD4_RAT	Glod4	Glyoxalase domain-containing protein 4	1	VTLAVSDLQK	VTLAVSDLQK	2	VTLAVSDLQK2	41743.7	20907.8	28845.2
P51111	P51111	HD_RAT	Htt	Huntingtin	1	VTLDLQNSTEK	VTLDLQNSTEK	2	VTLDLQNSTEK2	19807.5	14108.2	17190.7
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	VTLDSSGEL	VTLDSSGEL	1	VTLDSSGEL1	19097.7	18274	21479
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	VTLDSSGEL	VTLDSSGEL	2	VTLDSSGEL2	12357.5	4309.38	7002.75
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	VTLDYRPVIDK	VTLDYRPVIDK	3	VTLDYRPVIDK3	243936	234768	238856
A0A8I5ZSK4	A0A8I5ZSK4	A0A8I5ZSK4_RAT	Mia2	MIA SH3 domain ER export factor 2	1	VTLEESR	VTLEESR	2	VTLEESR2	22934.4	24221.8	24231.6
D3ZJR7	D3ZJR7	D3ZJR7_RAT	Dsc2	Desmocollin 2	1	VTLEIGVVNEAPYTR	VTLEIGVVNEAPYTR	2	VTLEIGVVNEAPYTR2	105359	111062	92652.3
D3ZJR7	D3ZJR7	D3ZJR7_RAT	Dsc2	Desmocollin 2	1	VTLEIGVVNEAPYTR	VTLEIGVVNEAPYTR	3	VTLEIGVVNEAPYTR3	5153	1934.46	7779.37
P11884	P11884;P13601;P51647;Q66HF8;Q63639	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	0	VTLELGGK	VTLELGGK	2	VTLELGGK2	236826	206502	260959
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	VTLELSNGSMVR	VTLELSNGSMVR	2	VTLELSNGSMVR2		2942.06	
Q5BK39	Q5BK39	CP054_RAT		Transmembrane protein C16orf54 homolog	1	VTLEQISAFWK	VTLEQISAFWK	2	VTLEQISAFWK2	8088.79	6859.48	5508.14
A0A096MK07	A0A096MK07	A0A096MK07_RAT	AC118772.1	Uncharacterized protein	1	VTLGEENRK	VTLGEENRK	2	VTLGEENRK2		20383.3	
O88483	O88483	PDP1_RAT	Pdp1	[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial	1	VTLGQMHGLLTER	VTLGQMHGLLTER	3	VTLGQMHGLLTER3	16255.3	13935.5	11319.4
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	VTLGTQPTVLR	VTLGTQPTVLR	2	VTLGTQPTVLR2	99060	109256	124186
A0A8I6AVP7	A0A8I6AVP7	A0A8I6AVP7_RAT	Odr4	Protein odr-4 homolog	1	VTLHICSSTK	VTLHIC(UniMod:4)SSTK	3	VTLHIC(UniMod:4)SSTK3	23844.5	19959.4	20411.3
Q5M871	Q5M871	FAIM3_RAT	Fcmr	Fas apoptotic inhibitory molecule 3	1	VTLKPSLNK	VTLKPSLNK	2	VTLKPSLNK2	33945.1	23293.8	29845.4
Q6AY19	Q6AY19	COQ8B_RAT	Coq8b	Atypical kinase COQ8B, mitochondrial	1	VTLLDFGASR	VTLLDFGASR	2	VTLLDFGASR2	8596	1582.68	3808.19
Q9JMB3	Q9JMB3	Q9JMB3_RAT	Epb41l3	Erythrocyte membrane protein band 4.1-like 3	1	VTLLDGSEYGCDVDK	VTLLDGSEYGC(UniMod:4)DVDK	2	VTLLDGSEYGC(UniMod:4)DVDK2	5718.48	3133.93	2398.31
Q9JMB3	Q9JMB3	Q9JMB3_RAT	Epb41l3	Erythrocyte membrane protein band 4.1-like 3	1	VTLLDGSEYGCDVDKR	VTLLDGSEYGC(UniMod:4)DVDKR	3	VTLLDGSEYGC(UniMod:4)DVDKR3	15181.2	23986.1	14437.4
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	VTLLDGTEFSCDLEK	VTLLDGTEFSC(UniMod:4)DLEK	2	VTLLDGTEFSC(UniMod:4)DLEK2	3453.92	6042.57	1298.03
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	VTLLDGTEFSCDLEKR	VTLLDGTEFSC(UniMod:4)DLEKR	3	VTLLDGTEFSC(UniMod:4)DLEKR3	7580.41	2611.38	
Q9ER24	Q9ER24	ATX10_RAT	Atxn10	Ataxin-10	1	VTLLDIMIAK	VTLLDIMIAK	2	VTLLDIMIAK2	3470.38	4464.05	6681.4
P18395	P18395	CSDE1_RAT	Csde1	Cold shock domain-containing protein E1	1	VTLLEGDHVR	VTLLEGDHVR	2	VTLLEGDHVR2	2021.63		
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	VTLLHHVLEEVEK	VTLLHHVLEEVEK	2	VTLLHHVLEEVEK2	25448.8	26841.7	25571.3
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	VTLLHHVLEEVEK	VTLLHHVLEEVEK	3	VTLLHHVLEEVEK3	498283	481616	492098
E9PT22	E9PT22	E9PT22_RAT	Inf2	Inverted formin 2	1	VTLLHHVLEEVEK	VTLLHHVLEEVEK	4	VTLLHHVLEEVEK4	44124	45779.6	46088.9
A0A8I6AQL7	A0A8I6AQL7	A0A8I6AQL7_RAT	Nek9	NIMA-related kinase 9	1	VTLLNAPTK	VTLLNAPTK	2	VTLLNAPTK2	75904	75799.6	74861.3
Q9ESN0	Q9ESN0	NIBA1_RAT	Niban1	Protein Niban 1	1	VTLLPER	VTLLPER	2	VTLLPER2	72776.4	80151.2	58446.1
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	VTLLSVPEAAR	VTLLSVPEAAR	2	VTLLSVPEAAR2	84258.2	79601	90628.2
B5DFH7	B5DFH7	B5DFH7_RAT	Traf2	TNF receptor-associated factor	1	VTLMLLDHNNR	VTLMLLDHNNR	3	VTLMLLDHNNR3	1763.58	2015.02	
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	VTLMQLPTR	VTLMQLPTR	2	VTLMQLPTR2	259954	267851	276906
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	VTLNDVPCEVTK	VTLNDVPC(UniMod:4)EVTK	2	VTLNDVPC(UniMod:4)EVTK2	126483	106847	110602
P17945	P17945	HGF_RAT	Hgf	Hepatocyte growth factor	1	VTLNESELCAGAEK	VTLNESELC(UniMod:4)AGAEK	2	VTLNESELC(UniMod:4)AGAEK2	4063.21	2857.58	7147.76
Q6P6G2	Q6P6G2	CF089_RAT		Bombesin receptor-activated protein C6orf89 homolog	1	VTLPEDTPK	VTLPEDTPK	2	VTLPEDTPK2	20906.5	5263.88	21171.8
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	VTLPTVPGDYTVK	VTLPTVPGDYTVK	2	VTLPTVPGDYTVK2	17265.3	23260.7	31883.8
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	VTLQIPASSLDANR	VTLQIPASSLDANR	2	VTLQIPASSLDANR2	31790.7	35722.2	29549.3
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	VTLQIPASSLDANRK	VTLQIPASSLDANRK	3	VTLQIPASSLDANRK3	32999.7	24437.5	27108.1
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	VTLQQSFSK	VTLQQSFSK	2	VTLQQSFSK2	12642	12821.5	9549.28
P35446	P35446	SPON1_RAT	Spon1	Spondin-1	1	VTLSAAPPSYFR	VTLSAAPPSYFR	2	VTLSAAPPSYFR2		7422.44	
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	VTLSEGPHHVALFK	VTLSEGPHHVALFK	3	VTLSEGPHHVALFK3	85308.6	63237.9	90310
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	VTLSEGPHHVALFK	VTLSEGPHHVALFK	4	VTLSEGPHHVALFK4	167605	158782	211148
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	VTLSFPSTLQTGTGTLK	VTLSFPSTLQTGTGTLK	2	VTLSFPSTLQTGTGTLK2	19114.4	27209.9	30850.3
F1LUU1	F1LUU1	F1LUU1_RAT	Itga11	Integrin subunit alpha 11	1	VTLSNVSER	VTLSNVSER	2	VTLSNVSER2	14438.7	16289.4	15786.7
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	VTLSTDK	VTLSTDK	2	VTLSTDK2	46493.8	52477.4	45470.1
D4A0T9	D4A0T9	D4A0T9_RAT	Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	1	VTLTEDQLPR	VTLTEDQLPR	2	VTLTEDQLPR2	20589.4	17734.8	16131.7
P85971	P85971	6PGL_RAT	Pgls	6-phosphogluconolactonase	1	VTLTLPVLNAAQSVIFVATGEGK	VTLTLPVLNAAQSVIFVATGEGK	3	VTLTLPVLNAAQSVIFVATGEGK3		18116.3	
P04642	P04642;A0A8I6ASS6	LDHA_RAT	Ldha	L-lactate dehydrogenase A chain	0	VTLTPDEEAR	VTLTPDEEAR	2	VTLTPDEEAR2	2.14121e+06	1.93421e+06	2.0876e+06
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	VTLVLSPQMATSAVCR	VTLVLSPQMATSAVC(UniMod:4)R	2	VTLVLSPQMATSAVC(UniMod:4)R2	419590	405521	430631
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	VTLVLSPQMATSAVCR	VTLVLSPQMATSAVC(UniMod:4)R	3	VTLVLSPQMATSAVC(UniMod:4)R3	45122.4	35865.9	40888.1
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	VTLYDPMSGVLTSVQTK	VTLYDPMSGVLTSVQTK	2	VTLYDPMSGVLTSVQTK2	179899	211159	197767
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	VTLYDPMSGVLTSVQTK	VTLYDPMSGVLTSVQTK	3	VTLYDPMSGVLTSVQTK3	66426.4	88148.3	87403.2
A0A8J8YNR6	A0A8J8YNR6	A0A8J8YNR6_RAT	Fxr2	FMR1 autosomal homolog 2	1	VTMAVPEDLR	VTMAVPEDLR	2	VTMAVPEDLR2	18162.5	17454.8	15742.8
Q5XIC8	Q5XIC8	ALKB3_RAT	Alkbh3	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3	1	VTMEPNPHWLPVLWTLK	VTMEPNPHWLPVLWTLK	3	VTMEPNPHWLPVLWTLK3	1059.54	3499.11	
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	VTMESALTAR	VTMESALTAR	2	VTMESALTAR2	21473.8	31103.8	25678.7
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	VTMFLTDSNNIK	VTMFLTDSNNIK	2	VTMFLTDSNNIK2	37506.1	32427.5	28392.7
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	VTMLFLGLHNVR	VTMLFLGLHNVR	2	VTMLFLGLHNVR2	4427.69	4289.43	2293.8
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	VTMLFLGLHNVR	VTMLFLGLHNVR	3	VTMLFLGLHNVR3	38952.6	57135.8	54776.8
P47196	P47196	AKT1_RAT	Akt1	RAC-alpha serine/threonine-protein kinase	1	VTMNEFEYLK	VTMNEFEYLK	2	VTMNEFEYLK2	8439.41	9681.84	6939.03
Q6IFW6	Q6IFV1;Q6IFV3;Q6IFW6;Q6IFX0;Q6IFW8	K1C10_RAT	Krt10	Keratin, type I cytoskeletal 10	0	VTMQNLNDR	VTMQNLNDR	2	VTMQNLNDR2	3.89803e+06	3.47538e+06	4.4231e+06
Q6P6Q9	Q6P6Q9	MICU1_RAT	Micu1	Calcium uptake protein 1, mitochondrial	1	VTMQQVAR	VTMQQVAR	2	VTMQQVAR2	72478.7	76052.4	72735.6
A0A8I5ZKG8	A0A8I5ZKG8	A0A8I5ZKG8_RAT	Cnst	Consortin, connexin sorting protein	1	VTMSDEPMER	VTMSDEPMER	2	VTMSDEPMER2	212384	234161	217992
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	VTMTSEGGR	VTMTSEGGR	2	VTMTSEGGR2		156819	
A0A8I6GKH8	A0A8I6GKH8	A0A8I6GKH8_RAT	Map7	Microtubule-associated protein 7	1	VTNDPTIK	VTNDPTIK	2	VTNDPTIK2	11523.9	7784.19	8244.02
O35806	O35806	LTBP2_RAT	Ltbp2	Latent-transforming growth factor beta-binding protein 2	1	VTNDVCSQPLR	VTNDVC(UniMod:4)SQPLR	2	VTNDVC(UniMod:4)SQPLR2	12814.2	11092	9175.52
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	VTNEDFKK	VTNEDFKK	2	VTNEDFKK2	15018.9		25363.9
Q64620	Q64620	PPP6_RAT	Ppp6c	Serine/threonine-protein phosphatase 6 catalytic subunit	1	VTNEFVHINNLK	VTNEFVHINNLK	2	VTNEFVHINNLK2	9599.3	13103	3329.75
Q64620	Q64620	PPP6_RAT	Ppp6c	Serine/threonine-protein phosphatase 6 catalytic subunit	1	VTNEFVHINNLK	VTNEFVHINNLK	3	VTNEFVHINNLK3	189412	228181	198857
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	VTNELYTVMK	VTNELYTVMK	2	VTNELYTVMK2	69244.2	77551.4	67613.5
A0A0U1RRU5	A0A0U1RRU5	A0A0U1RRU5_RAT	Tab1	TGF-beta activated kinase 1/MAP3K7 binding protein 1	1	VTNFVAQR	VTNFVAQR	2	VTNFVAQR2	14051.3	23353.1	18127.9
P48500	A0A0G2JWU1;A0A8I5ZVI4;P48500	TPIS_RAT	Tpi1	Triosephosphate isomerase	0	VTNGAFTGEISPGMIK	VTNGAFTGEISPGMIK	2	VTNGAFTGEISPGMIK2	70028.6	73606.6	84801.4
P48500	A0A0G2JWU1;A0A8I5ZVI4;P48500	TPIS_RAT	Tpi1	Triosephosphate isomerase	0	VTNGAFTGEISPGMIK	VTNGAFTGEISPGMIK	3	VTNGAFTGEISPGMIK3	6960.66	9874.76	13907.4
B2RYD7	B2RYD7	B2RYD7_RAT	Stt3b	dolichyl-diphosphooligosaccharide--protein glycotransferase	1	VTNIFPK	VTNIFPK	2	VTNIFPK2	106475	136478	121001
Q5FVF4	Q5FVF4	TM7S3_RAT	Tm7sf3	Transmembrane 7 superfamily member 3	1	VTNILDPSHHIPPLR	VTNILDPSHHIPPLR	4	VTNILDPSHHIPPLR4	18755.6	11565	15502.9
Q66H20	Q66H20	PTBP2_RAT	Ptbp2	Polypyrimidine tract-binding protein 2	1	VTNILMLK	VTNILMLK	2	VTNILMLK2	75373.6	70003.3	68601.6
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	VTNIVSFDDDDEEQGAGDTLKK	VTNIVSFDDDDEEQGAGDTLKK	3	VTNIVSFDDDDEEQGAGDTLKK3	2529.01	5608.7	5717.14
M0RCA3	M0RCA3	M0RCA3_RAT	Zfpl1	Zinc finger protein-like 1	1	VTNLFCFEHR	VTNLFC(UniMod:4)FEHR	3	VTNLFC(UniMod:4)FEHR3	24172.6	19949	22477.3
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	VTNLHLMLQLVR	VTNLHLMLQLVR	2	VTNLHLMLQLVR2	9558.99	7427.4	7743.47
P41542	P41542	USO1_RAT	Uso1	General vesicular transport factor p115	1	VTNLHLMLQLVR	VTNLHLMLQLVR	3	VTNLHLMLQLVR3	172274	263963	167866
Q00438	Q00438;Q9Z118	PTBP1_RAT	Ptbp1	Polypyrimidine tract-binding protein 1	0	VTNLLMLK	VTNLLMLK	2	VTNLLMLK2		74843	
Q5RK09	Q5RK09	EIF3G_RAT	Eif3g	Eukaryotic translation initiation factor 3 subunit G	1	VTNLSEDTR	VTNLSEDTR	2	VTNLSEDTR2	265390	262891	278637
Q923V4	Q923V4	FBX6_RAT	Fbxo6	F-box only protein 6	1	VTNSSIIVSHR	VTNSSIIVSHR	2	VTNSSIIVSHR2	9581	11683.2	12039.1
Q923V4	Q923V4	FBX6_RAT	Fbxo6	F-box only protein 6	1	VTNSSIIVSHR	VTNSSIIVSHR	3	VTNSSIIVSHR3	103948	107433	98686.8
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	VTNSTELQHQLEK	VTNSTELQHQLEK	2	VTNSTELQHQLEK2	1874.11	2075.98	
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	VTNSTELQHQLEK	VTNSTELQHQLEK	3	VTNSTELQHQLEK3	54058.2	63774.3	60845
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	VTNYIFDSLR	VTNYIFDSLR	2	VTNYIFDSLR2	61008.3	72344.8	64731.4
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	VTNYIPWIENIINNF	VTNYIPWIENIINNF	2	VTNYIPWIENIINNF2		21007.2	14615.9
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	VTNYIPWIENIINNF	VTNYIPWIENIINNF	3	VTNYIPWIENIINNF3	14735.2		
P09650	P09650	MCPT1_RAT	Mcpt1	Mast cell protease 1	1	VTPAVDVIPLPQPSDFLKPGK	VTPAVDVIPLPQPSDFLKPGK	3	VTPAVDVIPLPQPSDFLKPGK3	34999.5	31343.9	49955.1
Q6AYB4	Q6AYB4	HSP7E_RAT	Hspa14	Heat shock 70 kDa protein 14	1	VTPAVVAYSER	VTPAVVAYSER	2	VTPAVVAYSER2	6168.53	5314.16	
Q63621	Q63621	IL1AP_RAT	Il1rap	Interleukin-1 receptor accessory protein	1	VTPEDLK	VTPEDLK	2	VTPEDLK2	83741.5	79603.9	73687.5
Q63621	Q63621	IL1AP_RAT	Il1rap	Interleukin-1 receptor accessory protein	1	VTPEDLKR	VTPEDLKR	2	VTPEDLKR2	35471.8	24619	34130.6
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	VTPEERPK	VTPEERPK	2	VTPEERPK2			111620
D3ZCQ2	D3ZCQ2	D3ZCQ2_RAT	Alg11	GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase	1	VTPGHLLVSIGQFRPEK	VTPGHLLVSIGQFRPEK	4	VTPGHLLVSIGQFRPEK4		5377.43	
Q5U2R9	Q5U2R9	Q5U2R9_RAT	Scfd2	Sec1 family domain containing 2	1	VTPGQLMSYIQLFK	VTPGQLMSYIQLFK	2	VTPGQLMSYIQLFK2	7771.51	8847.38	5926.91
Q9JHW0	Q9JHW0	PSB7_RAT	Psmb7	Proteasome subunit beta type-7	1	VTPLELEVLEEIVQTMDTS	VTPLELEVLEEIVQTMDTS	3	VTPLELEVLEEIVQTMDTS3	7976.55		
A0A0G2K162	A0A0G2K162	A0A0G2K162_RAT	Epb41l2	Erythrocyte membrane protein band 4.1-like 2	1	VTPLLAEGK	VTPLLAEGK	2	VTPLLAEGK2	55601.9	52063.4	53504.6
D3ZKE1	D3ZKE1	D3ZKE1_RAT	Uvrag	UV radiation resistance associated	1	VTPLSSSLDTSLDFSK	VTPLSSSLDTSLDFSK	2	VTPLSSSLDTSLDFSK2	7890.84	12679	2995.89
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	VTPNLMDHLCGNGR	VTPNLMDHLC(UniMod:4)GNGR	2	VTPNLMDHLC(UniMod:4)GNGR2	104131	77508.1	64242.1
Q62894	Q62894	ECM1_RAT	Ecm1	Extracellular matrix protein 1	1	VTPNLMDHLCGNGR	VTPNLMDHLC(UniMod:4)GNGR	3	VTPNLMDHLC(UniMod:4)GNGR3	1.03793e+06	927906	854416
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	VTPPEGYDVVTVFPK	VTPPEGYDVVTVFPK	2	VTPPEGYDVVTVFPK2	1.19783e+06	1.04776e+06	1.14832e+06
P52944	P52944	PDLI1_RAT	Pdlim1	PDZ and LIM domain protein 1	1	VTPPEGYDVVTVFPK	VTPPEGYDVVTVFPK	3	VTPPEGYDVVTVFPK3	102440	81300	102551
Q9QUR2	Q9QUR2	DCTN4_RAT	Dctn4	Dynactin subunit 4	1	VTPQREEGDVTVCFK	VTPQREEGDVTVC(UniMod:4)FK	3	VTPQREEGDVTVC(UniMod:4)FK3	72232.3	58052.2	67981.6
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	VTPSGTQQIDK	VTPSGTQQIDK	2	VTPSGTQQIDK2	67501.7	58190.3	81783.9
Q9JJ19	Q9JJ19	NHRF1_RAT	Nherf1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	VTPSQEHLDGPLPEPFSNGEIQK	VTPSQEHLDGPLPEPFSNGEIQK	3	VTPSQEHLDGPLPEPFSNGEIQK3	19320.1	28888.6	24292.6
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	VTPSTVLLQVLEDTCR	VTPSTVLLQVLEDTC(UniMod:4)R	2	VTPSTVLLQVLEDTC(UniMod:4)R2	8272.12	5112.31	8963.89
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	VTPSTVLLQVLEDTCR	VTPSTVLLQVLEDTC(UniMod:4)R	3	VTPSTVLLQVLEDTC(UniMod:4)R3	13897.5	15476.1	25620.6
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	VTPSTVLLQVLEDTCRR	VTPSTVLLQVLEDTC(UniMod:4)RR	3	VTPSTVLLQVLEDTC(UniMod:4)RR3	12680.5	20828.7	21528.4
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	VTPSVPVSK	VTPSVPVSK	2	VTPSVPVSK2	33437.3	55554.5	36255.9
Q7TPA5	Q7TPA5	SPA11_RAT	Serpina11	Serpin A11	1	VTPTITNFALR	VTPTITNFALR	2	VTPTITNFALR2	15394.8	18552.9	19396.7
P47868	P47868	SCG3_RAT	Scg3	Secretogranin-3	1	VTPVAATQDGFTNR	VTPVAATQDGFTNR	2	VTPVAATQDGFTNR2	5690.28	2429.34	4992.37
O88658	O88658	KIF1B_RAT	Kif1b	Kinesin-like protein KIF1B	1	VTPYGEK	VTPYGEK	2	VTPYGEK2		11272.4	
P17425	P17425	HMCS1_RAT	Hmgcs1	Hydroxymethylglutaryl-CoA synthase, cytoplasmic	1	VTQDATPGSALDK	VTQDATPGSALDK	2	VTQDATPGSALDK2	15722.3	19839.9	12635.6
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	VTQDMICAGEK	VTQDMIC(UniMod:4)AGEK	2	VTQDMIC(UniMod:4)AGEK2	2.70803e+06	2.87929e+06	3.02802e+06
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	VTQDMICAGEK	VTQDMIC(UniMod:4)AGEK	3	VTQDMIC(UniMod:4)AGEK3	27743.7	27880	19858.5
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	VTQDMICAGEKEGGK	VTQDMIC(UniMod:4)AGEKEGGK	2	VTQDMIC(UniMod:4)AGEKEGGK2	4140.9	8121.86	8684.39
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	VTQDMICAGEKEGGK	VTQDMIC(UniMod:4)AGEKEGGK	3	VTQDMIC(UniMod:4)AGEKEGGK3	98482.6	149470	167844
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	VTQILQSPAFR	VTQILQSPAFR	2	VTQILQSPAFR2	59815.9	49492.3	51410.5
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	VTQILQSPAFREDLECLIQEQMK	VTQILQSPAFREDLEC(UniMod:4)LIQEQMK	3	VTQILQSPAFREDLEC(UniMod:4)LIQEQMK3	44373.6	39191.7	42345.8
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	VTQILQSPAFREDLECLIQEQMKK	VTQILQSPAFREDLEC(UniMod:4)LIQEQMKK	4	VTQILQSPAFREDLEC(UniMod:4)LIQEQMKK4	8933.44		9267.06
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	VTQLCLAAIQR	VTQLC(UniMod:4)LAAIQR	2	VTQLC(UniMod:4)LAAIQR2	13180.6	5013.44	8947.03
Q62785	Q62785	HAP28_RAT	Pdap1	28 kDa heat- and acid-stable phosphoprotein	1	VTQLDLDGPK	VTQLDLDGPK	2	VTQLDLDGPK2	195324	227805	209750
Q5FWU0	Q5FWU0	Q5FWU0_RAT	Wasf2	Wiskott-Aldrich syndrome protein family member	1	VTQLDPK	VTQLDPK	2	VTQLDPK2	66851.9	63039.1	38402.6
Q5FWU0	Q5FWU0	Q5FWU0_RAT	Wasf2	Wiskott-Aldrich syndrome protein family member	1	VTQLDPKEEEVSLQGINTR	VTQLDPKEEEVSLQGINTR	3	VTQLDPKEEEVSLQGINTR3	196879	235764	212729
D4A6W4	D4A6W4	D4A6W4_RAT	Rft1	Protein RFT1 homolog	1	VTQLLPSISR	VTQLLPSISR	2	VTQLLPSISR2	10519.8	16074.5	15157.9
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	VTQLQTDYDNLK	VTQLQTDYDNLK	2	VTQLQTDYDNLK2	4445.13	9547.03	8792.26
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	VTQLQTDYDNLKR	VTQLQTDYDNLKR	3	VTQLQTDYDNLKR3	10287.6	4917.29	7569.43
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	VTQLTDR	VTQLTDR	2	VTQLTDR2	88552.3	89575.1	64471
A0A0G2K603;G3V862	A0A0G2K603;G3V862	A0A0G2K603_RAT;G3V862_RAT	Angptl1;Angptl2	Angiopoietin-like 1	0	VTQLYMQLLHEIIR	VTQLYMQLLHEIIR	3	VTQLYMQLLHEIIR3	7387.79	4443.94	6641.92
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	VTQLYVPASR	VTQLYVPASR	2	VTQLYVPASR2	104339	123912	118902
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	VTQPLDR	VTQPLDR	2	VTQPLDR2	2.03528e+06	2.07699e+06	2.13e+06
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	VTQPLDREAIDK	VTQPLDREAIDK	2	VTQPLDREAIDK2	6724.08	15836.5	20024.4
Q9R0T4	Q9R0T4	CADH1_RAT	Cdh1	Cadherin-1	1	VTQPLDREAIDK	VTQPLDREAIDK	3	VTQPLDREAIDK3	186429	289573	296339
Q9Z244	Q9Z244	GMPR1_RAT	Gmpr	GMP reductase 1	1	VTQQHNTVFG	VTQQHNTVFG	2	VTQQHNTVFG2	135010	115167	141005
A0A096MJ11	A0A096MJ11	A0A096MJ11_RAT	Gsdmd	Gasdermin D	1	VTQQTWEIMQR	VTQQTWEIMQR	2	VTQQTWEIMQR2	8695.84	22067.2	12511.4
F1LN92	F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	1	VTQSAYAQIVQFGMNEK	VTQSAYAQIVQFGMNEK	2	VTQSAYAQIVQFGMNEK2	5425.79	8386.2	2743.98
F1LN92	F1LN92	F1LN92_RAT	Afg3l2	AFG3 like matrix AAA peptidase subunit 2	1	VTQSAYAQIVQFGMNEK	VTQSAYAQIVQFGMNEK	3	VTQSAYAQIVQFGMNEK3	2836.94	3357.04	2616.46
Q6PCT3	Q6PCT3	TPD54_RAT	Tpd52l2	Tumor protein D54	1	VTQSDLYK	VTQSDLYK	2	VTQSDLYK2	11547.4	9599.3	11383.4
Q9Z2L0	A0A8I5ZUF9;Q9Z2L0;A0A8I6GHL9	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	0	VTQSNFAVGYK	VTQSNFAVGYK	2	VTQSNFAVGYK2	469604	451207	514549
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	VTQTLQPTLYQIR	VTQTLQPTLYQIR	2	VTQTLQPTLYQIR2	599276	735797	680031
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	VTQTLQPTLYQIR	VTQTLQPTLYQIR	3	VTQTLQPTLYQIR3	99661.8	101707	131376
Q63100	Q63100	DC1I1_RAT	Dync1i1	Cytoplasmic dynein 1 intermediate chain 1	1	VTQVDFLPR	VTQVDFLPR	2	VTQVDFLPR2	12283.3	9107.55	17610
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	VTQVDGNSPVR	VTQVDGNSPVR	2	VTQVDGNSPVR2	196630	171214	192662
D3ZM20	D3ZM20	D3ZM20_RAT	Kif13a	Kinesin family member 13A	1	VTQWAEERDELFR	VTQWAEERDELFR	3	VTQWAEERDELFR3		4479.51	
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	VTRVEFEELCADLFDR	VTRVEFEELC(UniMod:4)ADLFDR	3	VTRVEFEELC(UniMod:4)ADLFDR3	15129	20097.1	14272.6
P20759	P20759	IGHG1_RAT		Ig gamma-1 chain C region	1	VTSAAFPSPIEK	VTSAAFPSPIEK	2	VTSAAFPSPIEK2	3.90223e+06	3.31038e+06	3.17582e+06
P20759	P20759	IGHG1_RAT		Ig gamma-1 chain C region	1	VTSAAFPSPIEK	VTSAAFPSPIEK	3	VTSAAFPSPIEK3	29312.6	21591.8	22359.2
E9PSP1	E9PSP1	E9PSP1_RAT	Pltp	Phospholipid transfer protein	1	VTSAALELVK	VTSAALELVK	2	VTSAALELVK2	1.24112e+06	1.33523e+06	1.28742e+06
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	VTSAHENLNSWIELK	VTSAHENLNSWIELK	3	VTSAHENLNSWIELK3	28427.6	10768.7	11164.9
P51583	P51583;A0A0G2K5S4	PUR6_RAT	Paics	Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase	0	VTSAHKGPDETLR	VTSAHKGPDETLR	3	VTSAHKGPDETLR3	11050.8		25713.4
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	VTSAVEALLSADSASR	VTSAVEALLSADSASR	2	VTSAVEALLSADSASR2	173002	117418	152075
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	VTSAVEALLSADSASR	VTSAVEALLSADSASR	3	VTSAVEALLSADSASR3	29947.7	36300.2	36845.3
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	VTSAVEALLSADSASRK	VTSAVEALLSADSASRK	3	VTSAVEALLSADSASRK3	18593.4	18836.6	26158.5
Q561S0	A0A1W2Q6F8;Q561S0	NDUAA_RAT	Ndufa10	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial	0	VTSAYLQDIEDAYK	VTSAYLQDIEDAYK	2	VTSAYLQDIEDAYK2	9999.17	7382.62	10859.8
Q561S0	A0A1W2Q6F8;Q561S0	NDUAA_RAT	Ndufa10	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial	0	VTSAYLQDIEDAYKK	VTSAYLQDIEDAYKK	2	VTSAYLQDIEDAYKK2	2194.77	2416.4	2461.39
Q561S0	A0A1W2Q6F8;Q561S0	NDUAA_RAT	Ndufa10	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial	0	VTSAYLQDIEDAYKK	VTSAYLQDIEDAYKK	3	VTSAYLQDIEDAYKK3	68597.7	69696.2	66790.5
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	VTSCHDPGDVEHSR	VTSC(UniMod:4)HDPGDVEHSR	2	VTSC(UniMod:4)HDPGDVEHSR2			3987.21
D3ZHZ3	D4A0G0;D3ZHZ3	D3ZHZ3_RAT	Osbpl3	Oxysterol-binding protein	0	VTSCIHNILSGQR	VTSC(UniMod:4)IHNILSGQR	3	VTSC(UniMod:4)IHNILSGQR3	12561.7	20536.5	21776.1
Q5XIP9	Q5XIP9	TMM43_RAT	Tmem43	Transmembrane protein 43	1	VTSDPQPGFLER	VTSDPQPGFLER	2	VTSDPQPGFLER2	132493	116366	112041
Q5XIP9	Q5XIP9	TMM43_RAT	Tmem43	Transmembrane protein 43	1	VTSDPQPGFLER	VTSDPQPGFLER	3	VTSDPQPGFLER3	3599.12	3904.32	
B1WBV0	B1WBV0	CTU1_RAT	Ctu1	Cytoplasmic tRNA 2-thiolation protein 1	1	VTSDPVALPEPCTCK	VTSDPVALPEPC(UniMod:4)TC(UniMod:4)K	2	VTSDPVALPEPC(UniMod:4)TC(UniMod:4)K2	5131.56	3623.29	
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	VTSDWYYAR	VTSDWYYAR	2	VTSDWYYAR2	261281	367787	310515
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	VTSELLR	VTSELLR	2	VTSELLR2	192984	178448	179144
Q9Z2S9	Q9Z2S9	FLOT2_RAT	Flot2	Flotillin-2	1	VTSEVNR	VTSEVNR	2	VTSEVNR2			15529.3
P31722	P31722	C1QC_RAT	C1qc	Complement C1q subcomponent subunit C	1	VTSFCDHMSNSK	VTSFC(UniMod:4)DHMSNSK	3	VTSFC(UniMod:4)DHMSNSK3	18324.9	4640.28	10248.2
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	VTSGGSLTSLNVK	VTSGGSLTSLNVK	2	VTSGGSLTSLNVK2	12384.3		6814.14
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	VTSGTKPNSFYK	VTSGTKPNSFYK	3	VTSGTKPNSFYK3	68375.2	68767.3	71701.1
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	VTSGVKPASFDK	VTSGVKPASFDK	3	VTSGVKPASFDK3	11391	16430.8	13954.2
O88767	O88767	PARK7_RAT	Park7	Parkinson disease protein 7 homolog	1	VTSHPLAK	VTSHPLAK	2	VTSHPLAK2			8781.54
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	VTSIHLPDYAHYYTIGPGMFPSSQIPSWK	VTSIHLPDYAHYYTIGPGMFPSSQIPSWK	4	VTSIHLPDYAHYYTIGPGMFPSSQIPSWK4	49271.8	56573.8	53076.6
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	VTSLDELLEGESYVCASNEPFRK	VTSLDELLEGESYVC(UniMod:4)ASNEPFRK	3	VTSLDELLEGESYVC(UniMod:4)ASNEPFRK3	19772.9	28034.2	30865.6
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	VTSLEEELTDLR	VTSLEEELTDLR	2	VTSLEEELTDLR2	999.643	6416.75	6440.12
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	VTSLEEELTDLRAEK	VTSLEEELTDLRAEK	3	VTSLEEELTDLRAEK3	11249.8	15556.2	24831.7
Q63707	Q63707	PYRD_RAT	Dhodh	Dihydroorotate dehydrogenase (quinone), mitochondrial	1	VTSLGLLPR	VTSLGLLPR	2	VTSLGLLPR2	2687.44	1317.86	3646.27
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	VTSLLEVNCEDK	VTSLLEVNC(UniMod:4)EDK	2	VTSLLEVNC(UniMod:4)EDK2	40237.6	35322.8	29644.2
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	VTSLLEVNCEDK	VTSLLEVNC(UniMod:4)EDK	3	VTSLLEVNC(UniMod:4)EDK3	32940.3	42782.8	31790.2
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	VTSLLEVNCEDKK	VTSLLEVNC(UniMod:4)EDKK	2	VTSLLEVNC(UniMod:4)EDKK2	496621	485632	449279
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	VTSLLEVNCEDKK	VTSLLEVNC(UniMod:4)EDKK	3	VTSLLEVNC(UniMod:4)EDKK3	249333	303495	364728
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	VTSLLEVNCEDKKLK	VTSLLEVNC(UniMod:4)EDKKLK	3	VTSLLEVNC(UniMod:4)EDKKLK3		8827.99	7736.35
D3ZQU7	D3ZQU7	D3ZQU7_RAT	Gp1ba	Glycoprotein Ib platelet subunit alpha	1	VTSLLEVNCEDKKLK	VTSLLEVNC(UniMod:4)EDKKLK	4	VTSLLEVNC(UniMod:4)EDKKLK4	11459.2	9677.4	18739
F1M8B7	F1M8B7	F1M8B7_RAT	Chmp2b	Charged multivesicular body protein 2B	1	VTSMSTQTK	VTSMSTQTK	2	VTSMSTQTK2	11372.9		9194.44
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	VTSMTFLTGK	VTSMTFLTGK	2	VTSMTFLTGK2	29941.3	30363.4	31924.2
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	VTSPTKV	VTSPTKV	1	VTSPTKV1	13034	7049.24	13325.2
G3V8G1	G3V8G1	G3V8G1_RAT	Agtpbp1	tubulin-glutamate carboxypeptidase	1	VTSPTTYVLDEDEPR	VTSPTTYVLDEDEPR	2	VTSPTTYVLDEDEPR2	647.383		2890.18
P86411	P86411	RGPA2_RAT	Ralgapa2	Ral GTPase-activating protein subunit alpha-2	1	VTSQGQPSPVEPR	VTSQGQPSPVEPR	2	VTSQGQPSPVEPR2	7114.67	6556.73	5871.39
A0A8I5ZVX1	A0A8I5ZVX1	A0A8I5ZVX1_RAT	Ppfibp2	PPFIA binding protein 2	1	VTSQLHHLSIK	VTSQLHHLSIK	3	VTSQLHHLSIK3	3460.26	1761.84	5313.23
Q80ZF4	Q80ZF4	Q80ZF4_RAT	Mapkapk2	non-specific serine/threonine protein kinase	1	VTSQVLGLGINGK	VTSQVLGLGINGK	2	VTSQVLGLGINGK2	4991.61	3412.57	9637.67
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	VTSRFAHNVVTTR	VTSRFAHNVVTTR	3	VTSRFAHNVVTTR3	31026.2	51358.9	50627.2
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	VTSRFAHYVITSQVVNSANK	VTSRFAHYVITSQVVNSANK	3	VTSRFAHYVITSQVVNSANK3	20103.3	15503.6	15892.5
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	VTSRFAHYVITSQVVNSANK	VTSRFAHYVITSQVVNSANK	4	VTSRFAHYVITSQVVNSANK4	22095.4	23409.1	15534
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	VTSRFAHYVITSQVVNSANKAR	VTSRFAHYVITSQVVNSANKAR	4	VTSRFAHYVITSQVVNSANKAR4	28041.5	45042	38105.4
P97523	P97523	MET_RAT	Met	Hepatocyte growth factor receptor	1	VTSSFSYR	VTSSFSYR	2	VTSSFSYR2	12604.3	4679.48	5969.93
P14270	P14270;P54748	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	0	VTSSGVLLLDNYSDR	VTSSGVLLLDNYSDR	2	VTSSGVLLLDNYSDR2	58437.3	49488	57675.3
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	VTSSLHDMVDQLEK	VTSSLHDMVDQLEK	3	VTSSLHDMVDQLEK3	21036.6	24548.2	21114.9
D3ZZ81	D3ZZ81	D3ZZ81_RAT	Ppfia1	PTPRF interacting protein alpha 1	1	VTSSMSSPSMQPK	VTSSMSSPSMQPK	2	VTSSMSSPSMQPK2	47514.7	46749.2	44171.8
A0A0G2K687	A0A0G2K687	A0A0G2K687_RAT	Rubcn	Rubicon autophagy regulator	1	VTSSSSQFSSR	VTSSSSQFSSR	2	VTSSSSQFSSR2	4765.86	4167.34	
Q6AYS6	Q6AYS6	SNX17_RAT	Snx17	Sorting nexin-17	1	VTSSVPLPSGGTSTPSR	VTSSVPLPSGGTSTPSR	2	VTSSVPLPSGGTSTPSR2	28181.5	27757	26974.7
P06399	P06399	FIBA_RAT	Fga	Fibrinogen alpha chain	1	VTSTGTSTTR	VTSTGTSTTR	2	VTSTGTSTTR2			1.26206e+07
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	VTSTSGTITSPNWPDKYPSK	VTSTSGTITSPNWPDKYPSK	3	VTSTSGTITSPNWPDKYPSK3	23601.5	14771.4	14626
Q62920	Q62920	PDLI5_RAT	Pdlim5	PDZ and LIM domain protein 5	1	VTSTTNMAYNK	VTSTTNMAYNK	2	VTSTTNMAYNK2	41556.6	48850	35919.1
Q4QQW8	Q4QQW8	PLBL2_RAT	Plbd2	Putative phospholipase B-like 2	1	VTSVALAK	VTSVALAK	2	VTSVALAK2	15750.2	23615.8	18646.9
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	VTSVSDQSDR	VTSVSDQSDR	2	VTSVSDQSDR2			12096.4
D3ZAL7	D3ZAL7	D3ZAL7_RAT	Gab1	GRB2-associated binding protein 1	1	VTSVSGESGLYNLPR	VTSVSGESGLYNLPR	2	VTSVSGESGLYNLPR2	887.711	2567.8	5310.76
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	VTSVVVDIVPR	VTSVVVDIVPR	2	VTSVVVDIVPR2	66190.1	76361.7	63385.4
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	VTSVVVDIVPR	VTSVVVDIVPR	3	VTSVVVDIVPR3	8111.51	7662.04	8181.68
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	VTSYGGELR	VTSYGGELR	2	VTSYGGELR2	153781	166084	181752
A0A8I5ZVT2	A0A8I5ZVT2	A0A8I5ZVT2_RAT	Fndc3a	Fibronectin type III domain containing 3a	1	VTSYVINSLQPDTTYR	VTSYVINSLQPDTTYR	2	VTSYVINSLQPDTTYR2	1147.31		1912.53
A0A8I5ZU93	A0A8I5ZU93	A0A8I5ZU93_RAT	Cops7a	COP9 signalosome subunit 7A	1	VTTAAAAAATSQDPEQHLTELR	VTTAAAAAATSQDPEQHLTELR	3	VTTAAAAAATSQDPEQHLTELR3	14404	8229.96	8782.51
O88277	O88277	FAT2_RAT	Fat2	Protocadherin Fat 2	1	VTTALPNLR	VTTALPNLR	2	VTTALPNLR2	7273.18	6650.68	4910.41
G3V8L0	G3V8L0	G3V8L0_RAT	Wdr24	GATOR complex protein WDR24	1	VTTALSGSALTGR	VTTALSGSALTGR	2	VTTALSGSALTGR2	3440.26	8613.55	892.775
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	VTTAPKNGLGPTK	VTTAPKNGLGPTK	3	VTTAPKNGLGPTK3	16959.1	32332.5	12385.2
Q2LC84	Q2LC84	NUMB_RAT	Numb	Protein numb homolog	1	VTTATEQAEREEIMK	VTTATEQAEREEIMK	3	VTTATEQAEREEIMK3	87209.6	69150.9	72021.9
A0A8I5ZRG0	A0A8I5ZRG0	A0A8I5ZRG0_RAT	ENSRNOG00000070269	Proteasome subunit beta type-3	1	VTTDFQK	VTTDFQK	2	VTTDFQK2	18106.8	16541.8	11857.5
P52873	P52873	PYC_RAT	Pc	Pyruvate carboxylase, mitochondrial	1	VTTEDPAR	VTTEDPAR	2	VTTEDPAR2	5928.92	9491.07	9196.41
A0A8I6AGG9	A0A8I6AGG9	A0A8I6AGG9_RAT	Chchd3	Coiled-coil-helix-coiled-coil-helix domain containing 3	1	VTTEEYQK	VTTEEYQK	2	VTTEEYQK2	196154	143085	189026
Q9JID2	Q9JID2	GNA11_RAT	Gna11	Guanine nucleotide-binding protein subunit alpha-11	1	VTTFEHQYVNAIK	VTTFEHQYVNAIK	3	VTTFEHQYVNAIK3	1426.87	4119.9	
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	VTTFTGCMGETYFDNKPIGLWNFR	VTTFTGC(UniMod:4)MGETYFDNKPIGLWNFR	3	VTTFTGC(UniMod:4)MGETYFDNKPIGLWNFR3	16238.9	17240.3	8330.72
D3ZC01	D3ZC01	D3ZC01_RAT	Rbbp5	RB binding protein 5, histone lysine methyltransferase complex subunit	1	VTTGTSNTTAIK	VTTGTSNTTAIK	2	VTTGTSNTTAIK2	1965.6	6188.24	
P20069	P20069	MPPA_RAT	Pmpca	Mitochondrial-processing peptidase subunit alpha	1	VTTLDNGLR	VTTLDNGLR	2	VTTLDNGLR2	22599	12711.4	18456.3
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	VTTLGETAER	VTTLGETAER	2	VTTLGETAER2	44791.4	38919.2	34383.4
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	VTTLPGHIQAVYVQNVVK	VTTLPGHIQAVYVQNVVK	3	VTTLPGHIQAVYVQNVVK3	147558	212835	159899
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	VTTMVDGK	VTTMVDGK	2	VTTMVDGK2	27932.8	32882.9	27395.2
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	VTTPQEGYISR	VTTPQEGYISR	2	VTTPQEGYISR2	27362.9	23484.7	26458.6
A0A8I6A0N6	A0A8I6A0N6	A0A8I6A0N6_RAT	Dop1a	DOP1 leucine zipper like protein A	1	VTTQDLIGNR	VTTQDLIGNR	2	VTTQDLIGNR2	1703.43		2841.21
F1LU27	F1LU27	F1LU27_RAT	Focad	Focadhesin	1	VTTQLAQADSSQVPHLIPVLMFK	VTTQLAQADSSQVPHLIPVLMFK	3	VTTQLAQADSSQVPHLIPVLMFK3	6197.03	8477.18	
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	VTTQTSLPMFR	VTTQTSLPMFR	2	VTTQTSLPMFR2	134067	168883	153089
D4A529	D4A529	D4A529_RAT	She	Src homology 2 domain containing E	1	VTTTATASASATTTEEEPHR	VTTTATASASATTTEEEPHR	3	VTTTATASASATTTEEEPHR3	2129.41	2875.97	3169.23
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	VTTTRLDAPSQIEVR	VTTTRLDAPSQIEVR	3	VTTTRLDAPSQIEVR3	14788.6	2794.49	5474.87
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	VTTTVHNIIVGK	VTTTVHNIIVGK	2	VTTTVHNIIVGK2	9405.76	7469.97	4500.33
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	VTTTVHNIIVGK	VTTTVHNIIVGK	3	VTTTVHNIIVGK3	78925.1	76170.5	70861.6
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	VTTVTEIGK	VTTVTEIGK	2	VTTVTEIGK2	129769	146691	128944
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	VTTVTEIGKDVIGLR	VTTVTEIGKDVIGLR	2	VTTVTEIGKDVIGLR2	21490.6	19065.7	29313.2
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	VTTVTEIGKDVIGLR	VTTVTEIGKDVIGLR	3	VTTVTEIGKDVIGLR3	230396	296408	320770
P18266	P18266	GSK3B_RAT	Gsk3b	Glycogen synthase kinase-3 beta	1	VTTVVATPGQGPDRPQEVSYTDTK	VTTVVATPGQGPDRPQEVSYTDTK	3	VTTVVATPGQGPDRPQEVSYTDTK3	35240.5	37810.3	34709.8
Q6TUD3	Q6TUD3	Q6TUD3_RAT	Rdh11	LRRGT00111	1	VTTYSVHPGTVHSELIR	VTTYSVHPGTVHSELIR	3	VTTYSVHPGTVHSELIR3	24054.2	7486.95	6980.71
Q6TUD3	Q6TUD3	Q6TUD3_RAT	Rdh11	LRRGT00111	1	VTTYSVHPGTVHSELIR	VTTYSVHPGTVHSELIR	4	VTTYSVHPGTVHSELIR4	28941.8	47816.9	35553.6
O88767	O88767	PARK7_RAT	Park7	Parkinson disease protein 7 homolog	1	VTVAGLAGK	VTVAGLAGK	2	VTVAGLAGK2	16430.7		9891.29
O88767	O88767	PARK7_RAT	Park7	Parkinson disease protein 7 homolog	1	VTVAGLAGKDPVQCSR	VTVAGLAGKDPVQC(UniMod:4)SR	3	VTVAGLAGKDPVQC(UniMod:4)SR3	30445.9	36548.2	23093.9
A0A8I5ZQH3	Q9Z340;A0A8I5ZQH3	A0A8I5ZQH3_RAT	Pard3b	Par-3 family cell polarity regulator beta	0	VTVCFGR	VTVC(UniMod:4)FGR	2	VTVC(UniMod:4)FGR2	9834.54	9786.8	10429.7
Q7TP59	Q7TP59	Q7TP59_RAT	Dipk2a	Ab2-095	1	VTVDHNYYAVCQNLLSR	VTVDHNYYAVC(UniMod:4)QNLLSR	3	VTVDHNYYAVC(UniMod:4)QNLLSR3	3022.44	2075.22	
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VTVEDQNDNAPVFVNLPYYAVVK	VTVEDQNDNAPVFVNLPYYAVVK	3	VTVEDQNDNAPVFVNLPYYAVVK3	31571.9	24065.1	30278.5
E9PU15	E9PU15	E9PU15_RAT	Dicer1	Endoribonuclease Dicer	1	VTVEVVGK	VTVEVVGK	2	VTVEVVGK2	6773.98	9924.67	10373.6
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	VTVFPSK	VTVFPSK	1	VTVFPSK1	24452.9	15603.1	19533.9
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	VTVFPSK	VTVFPSK	2	VTVFPSK2	692929	730938	671593
B0BMY6	B0BMY6	B0BMY6_RAT	Otulin	ubiquitinyl hydrolase 1	1	VTVGAQPR	VTVGAQPR	2	VTVGAQPR2	13561.4	11095.3	18918.8
Q4V8C7	Q4V8C7	PRKRA_RAT	Prkra	Interferon-inducible double-stranded RNA-dependent protein kinase activator A	1	VTVGDITCTGEGTSK	VTVGDITC(UniMod:4)TGEGTSK	2	VTVGDITC(UniMod:4)TGEGTSK2	10468.9	8536.83	12146.2
Q3SWU0	Q3SWU0	TRBP2_RAT	Tarbp2	RISC-loading complex subunit TARBP2	1	VTVGDTSCTGQGPSK	VTVGDTSC(UniMod:4)TGQGPSK	2	VTVGDTSC(UniMod:4)TGQGPSK2	2103.56		
A0A8I6GD86	A0A8I6GD86	A0A8I6GD86_RAT	Tmem181	Transmembrane protein 181	1	VTVGFEHLNQPIK	VTVGFEHLNQPIK	3	VTVGFEHLNQPIK3	3685.46		
P58751	P58751	RELN_RAT	Reln	Reelin	1	VTVILPQK	VTVILPQK	2	VTVILPQK2	230198	256693	231528
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	VTVKPHLLFR	VTVKPHLLFR	3	VTVKPHLLFR3	4883.45		5188.04
A0A0G2K6T9	A0A0G2K6T9	A0A0G2K6T9_RAT	Pcdh1	Protocadherin 1	1	VTVLDTNDNAPK	VTVLDTNDNAPK	2	VTVLDTNDNAPK2	36579.5	28130.9	24472.9
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VTVLFAGQHIAK	VTVLFAGQHIAK	2	VTVLFAGQHIAK2	829262	468313	587743
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VTVLFAGQHIAK	VTVLFAGQHIAK	3	VTVLFAGQHIAK3	58234.3	89573.8	61601.5
P30835	P47858;P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	0	VTVLGHVQR	VTVLGHVQR	2	VTVLGHVQR2	15849.1	6970.79	7550.67
Q5HZE4	Q5HZE4	MTNA_RAT	Mri1	Methylthioribose-1-phosphate isomerase	1	VTVLTHCNTGALATAGYGTALGVIR	VTVLTHC(UniMod:4)NTGALATAGYGTALGVIR	3	VTVLTHC(UniMod:4)NTGALATAGYGTALGVIR3	7188.28		9067.7
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	VTVNICR	VTVNIC(UniMod:4)R	2	VTVNIC(UniMod:4)R2	13269.8	23912.3	29927.2
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	VTVNTNVTDLNDYLQHILK	VTVNTNVTDLNDYLQHILK	3	VTVNTNVTDLNDYLQHILK3	32587.8	42438.6	73689.5
A0A0G2KAF4	A0A0G2KAF4	A0A0G2KAF4_RAT	Nfxl1	Nuclear transcription factor, X-box binding-like 1	1	VTVPCGR	VTVPC(UniMod:4)GR	2	VTVPC(UniMod:4)GR2	17949.7	24663.7	18666.1
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	VTVPLMGAISDLCEALSK	VTVPLMGAISDLC(UniMod:4)EALSK	3	VTVPLMGAISDLC(UniMod:4)EALSK3	1312.56		
Q8K3R4	Q8K3R4	Q8K3R4_RAT	Adipoq	Adiponectin d	1	VTVPNVPIR	VTVPNVPIR	2	VTVPNVPIR2	46876.3	53764.4	44083
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	VTVQVDR	VTVQVDR	2	VTVQVDR2	129486	105373	141524
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	VTVVCEPEDYGAVAAEMQGSGNK	VTVVC(UniMod:4)EPEDYGAVAAEMQGSGNK	3	VTVVC(UniMod:4)EPEDYGAVAAEMQGSGNK3	12866	6643.96	7959.06
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	VTVVFSTVFK	VTVVFSTVFK	2	VTVVFSTVFK2	88673.3	113865	107184
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	VTVVFSTVFKDDDDVVIGK	VTVVFSTVFKDDDDVVIGK	3	VTVVFSTVFKDDDDVVIGK3	10039.6	23228.6	19652.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VTVVVDWLQDGLAQIK	VTVVVDWLQDGLAQIK	2	VTVVVDWLQDGLAQIK2	39381.3	33177.6	44023.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VTVVVDWLQDGLAQIK	VTVVVDWLQDGLAQIK	3	VTVVVDWLQDGLAQIK3	36633	40810.7	32080.5
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	VTVVYAENGTVLQGTTVAAVYK	VTVVYAENGTVLQGTTVAAVYK	3	VTVVYAENGTVLQGTTVAAVYK3	1.20576e+06	1.40283e+06	1.32486e+06
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	VTVVYAENGTVLQGTTVAAVYKGK	VTVVYAENGTVLQGTTVAAVYKGK	3	VTVVYAENGTVLQGTTVAAVYKGK3	12526.9	15516.6	10925
A0A8I6AT07	A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	1	VTVYEYDTR	VTVYEYDTR	2	VTVYEYDTR2		2552.42	
P58751	P58751	RELN_RAT	Reln	Reelin	1	VTVYLPLATNSPR	VTVYLPLATNSPR	2	VTVYLPLATNSPR2	204953	227682	243714
P58751	P58751	RELN_RAT	Reln	Reelin	1	VTVYLPLATNSPR	VTVYLPLATNSPR	3	VTVYLPLATNSPR3	10265.9	5821.23	12280.1
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	VTWAPPPSIELTNLLVR	VTWAPPPSIELTNLLVR	2	VTWAPPPSIELTNLLVR2	5.96628e+07	79172.2	6.61509e+07
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	VTWAPPPSIELTNLLVR	VTWAPPPSIELTNLLVR	3	VTWAPPPSIELTNLLVR3	7.55118e+06	8.48013e+06	15212.8
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	VTWAPPPSIELTNLLVR	VTWAPPPSIELTNLLVR	4	VTWAPPPSIELTNLLVR4	44421	50752.2	45665.5
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	VTWAPPPSIELTNLLVRYSPVK	VTWAPPPSIELTNLLVRYSPVK	3	VTWAPPPSIELTNLLVRYSPVK3	18809	17904.7	16611.8
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	VTWDISDSNVEHFR	VTWDISDSNVEHFR	2	VTWDISDSNVEHFR2	6346.79	1811.61	281.642
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	VTWDISDSNVEHFR	VTWDISDSNVEHFR	3	VTWDISDSNVEHFR3	27488.3	28697.6	22414.5
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	VTWDSAQVFDLAQTLR	VTWDSAQVFDLAQTLR	2	VTWDSAQVFDLAQTLR2	23533.3		22803.3
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	VTWDSAQVFDLAQTLR	VTWDSAQVFDLAQTLR	3	VTWDSAQVFDLAQTLR3	38006.6	25105.5	33804.5
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	VTWDSSFCAVNPR	VTWDSSFC(UniMod:4)AVNPR	2	VTWDSSFC(UniMod:4)AVNPR2	219061	166547	271485
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	VTWDSSFCAVNPR	VTWDSSFC(UniMod:4)AVNPR	3	VTWDSSFC(UniMod:4)AVNPR3	32023.2	37135.7	25515.2
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	VTWDSTFCAVNPK	VTWDSTFC(UniMod:4)AVNPK	2	VTWDSTFC(UniMod:4)AVNPK2	685315	716184	761337
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	VTWDSTFCAVNPK	VTWDSTFC(UniMod:4)AVNPK	3	VTWDSTFC(UniMod:4)AVNPK3	15674.6	30577	27375.6
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	VTWEGAQVCELAQALR	VTWEGAQVC(UniMod:4)ELAQALR	2	VTWEGAQVC(UniMod:4)ELAQALR2	3673.86	6036.78	3966.39
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	VTWEGAQVCELAQALR	VTWEGAQVC(UniMod:4)ELAQALR	3	VTWEGAQVC(UniMod:4)ELAQALR3	7849.88	13660	13604.5
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	VTWHPLSAEEGQHK	VTWHPLSAEEGQHK	3	VTWHPLSAEEGQHK3		3566.83	5753.4
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	VTWHPLSAEEGQHK	VTWHPLSAEEGQHK	4	VTWHPLSAEEGQHK4	34949.8	42677	28403.9
Q920F5	Q920F5	DCMC_RAT	Mlycd	Malonyl-CoA decarboxylase, mitochondrial	1	VTWHSPCEVLQK	VTWHSPC(UniMod:4)EVLQK	3	VTWHSPC(UniMod:4)EVLQK3	5227.82	2723.29	2824.92
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	VTWIQASTMEELLDLK	VTWIQASTMEELLDLK	2	VTWIQASTMEELLDLK2	13589.3	10857.7	12318.1
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	VTWIQASTMEELLDLK	VTWIQASTMEELLDLK	3	VTWIQASTMEELLDLK3	3552.64	3707.56	3424.43
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	VTWLQTIR	VTWLQTIR	2	VTWLQTIR2	19557.6	9938.75	55869.2
M0RC17	M0RC17	M0RC17_RAT	Chl1	Cell adhesion molecule L1-like	1	VTWSSIPK	VTWSSIPK	2	VTWSSIPK2	48440.8	47413.1	49444.7
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	VTWVPPSSR	VTWVPPSSR	2	VTWVPPSSR2	197469	230853	204142
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VTYCPTEPGNYIINIK	VTYC(UniMod:4)PTEPGNYIINIK	2	VTYC(UniMod:4)PTEPGNYIINIK2	733320	689927	687392
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VTYCPTEPGNYIINIK	VTYC(UniMod:4)PTEPGNYIINIK	3	VTYC(UniMod:4)PTEPGNYIINIK3	97290.1	72360.5	77593.3
Q9JLS8	Q9JLS8	OBRG_RAT	Leprot	Leptin receptor gene-related protein	1	VTYDSDATSSACR	VTYDSDATSSAC(UniMod:4)R	2	VTYDSDATSSAC(UniMod:4)R2	7381.93	11284.7	5539
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	VTYDSFCNNR	VTYDSFC(UniMod:4)NNR	2	VTYDSFC(UniMod:4)NNR2	95121.6	92408.5	103315
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	VTYDVNR	VTYDVNR	1	VTYDVNR1	206184	272152	197017
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	VTYDVNR	VTYDVNR	2	VTYDVNR2	136924	7.96472e+07	8.41554e+07
F7EYX4	F7EYX4	F7EYX4_RAT	Itih1	Inter-alpha trypsin inhibitor, heavy chain 1	1	VTYDVNRDK	VTYDVNRDK	2	VTYDVNRDK2	4133.44	2.47124e+06	2.30486e+06
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	VTYDVQASLQK	VTYDVQASLQK	2	VTYDVQASLQK2	67333.2	72202.2	83627.3
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	VTYESEK	VTYESEK	2	VTYESEK2	42635.4	28226.6	47872
Q99P39	Q99P39	NFS1_RAT	Nfs1	Cysteine desulfurase	1	VTYLPVQK	VTYLPVQK	2	VTYLPVQK2	19000.6	20568.7	14168
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	VTYLTAQGDPK	VTYLTAQGDPK	2	VTYLTAQGDPK2	12042.8	16420	21612.1
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	VTYLTAQGDPKEEVVMVPGVQNSLLLK	VTYLTAQGDPKEEVVMVPGVQNSLLLK	3	VTYLTAQGDPKEEVVMVPGVQNSLLLK3	28889.3	28480.4	29223.1
P41562	P41562	IDHC_RAT	Idh1	Isocitrate dehydrogenase [NADP] cytoplasmic	1	VTYLVHDFEEGGGVAMGMYNQDK	VTYLVHDFEEGGGVAMGMYNQDK	3	VTYLVHDFEEGGGVAMGMYNQDK3	6797.75	8236.38	4319.19
Q5BJU0	Q5BJU0	Q5BJU0_RAT	Rras2	RAS related 2	1	VTYMEASAK	VTYMEASAK	2	VTYMEASAK2	43072.4	39476	36407.3
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	VTYMEEER	VTYMEEER	2	VTYMEEER2	167957	191549	183989
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	VTYMEEERNFTTEQVTAMLLSK	VTYMEEERNFTTEQVTAMLLSK	3	VTYMEEERNFTTEQVTAMLLSK3		6115.91	8865.43
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	VTYNNFSWHASTECFLCSCCSK	VTYNNFSWHASTEC(UniMod:4)FLC(UniMod:4)SC(UniMod:4)C(UniMod:4)SK	3	VTYNNFSWHASTEC(UniMod:4)FLC(UniMod:4)SC(UniMod:4)C(UniMod:4)SK3	7233.56	8346.41	8070.36
P97689	P97689	UT1_RAT	Slc14a1	Urea transporter 1	1	VTYSEENR	VTYSEENR	2	VTYSEENR2	741039	716111	755619
P08650	P08650	CO5_RAT	C5	Complement C5	1	VTYSSGYVNLSPENK	VTYSSGYVNLSPENK	2	VTYSSGYVNLSPENK2	526153	403756	438122
P08650	P08650	CO5_RAT	C5	Complement C5	1	VTYSSGYVNLSPENK	VTYSSGYVNLSPENK	3	VTYSSGYVNLSPENK3	39214.8	42049.9	31389.6
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	VTYTAQDEIK	VTYTAQDEIK	2	VTYTAQDEIK2	649406	590656	498109
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	VTYTINPSSHCNPNHLSYFK	VTYTINPSSHC(UniMod:4)NPNHLSYFK	3	VTYTINPSSHC(UniMod:4)NPNHLSYFK3	39616.2		48984
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	VTYTINPSSHCNPNHLSYFK	VTYTINPSSHC(UniMod:4)NPNHLSYFK	4	VTYTINPSSHC(UniMod:4)NPNHLSYFK4	49618.6	57042.9	49773
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VTYTPMAPGSYLISIK	VTYTPMAPGSYLISIK	2	VTYTPMAPGSYLISIK2	4.9945e+06	5.18342e+06	5.47078e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VTYTPMAPGSYLISIK	VTYTPMAPGSYLISIK	3	VTYTPMAPGSYLISIK3	1.13713e+06	1.15516e+06	1.23364e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VTYTPMAPGSYLISIKYGGPYHIGGSPFK	VTYTPMAPGSYLISIKYGGPYHIGGSPFK	4	VTYTPMAPGSYLISIKYGGPYHIGGSPFK4			5536.79
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	VVAACAMPVMK	VVAAC(UniMod:4)AMPVMK	2	VVAAC(UniMod:4)AMPVMK2	41514.7	44263.5	32648.6
P51111	P51111	HD_RAT	Htt	Huntingtin	1	VVAAVSHELITSTTR	VVAAVSHELITSTTR	3	VVAAVSHELITSTTR3	63123.8	61598.1	55435.7
G3V762	G3V762	G3V762_RAT	Gfus	GDP-L-fucose synthase	1	VVADGAGLPGEEWVFVSSK	VVADGAGLPGEEWVFVSSK	2	VVADGAGLPGEEWVFVSSK2	20007.7	21155	24651.7
G3V762	G3V762	G3V762_RAT	Gfus	GDP-L-fucose synthase	1	VVADGAGLPGEEWVFVSSK	VVADGAGLPGEEWVFVSSK	3	VVADGAGLPGEEWVFVSSK3	3102.67	5574.95	7445.79
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	VVADGFDFANGIGISLDGK	VVADGFDFANGIGISLDGK	2	VVADGFDFANGIGISLDGK2	245985	339449	274903
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	VVADGFDFANGIGISLDGK	VVADGFDFANGIGISLDGK	3	VVADGFDFANGIGISLDGK3	843365	1.0369e+06	1.06634e+06
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	VVADGFDFANGIGISLDGKYVYIAELLAHK	VVADGFDFANGIGISLDGKYVYIAELLAHK	4	VVADGFDFANGIGISLDGKYVYIAELLAHK4	15948.7	9061.53	9313.35
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	VVAEEAWENHLK	VVAEEAWENHLK	2	VVAEEAWENHLK2	12898.4	9597.52	7588.72
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	VVAEEAWENHLK	VVAEEAWENHLK	3	VVAEEAWENHLK3	57002.3	38511	59103.1
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	VVAEEAWENHLKR	VVAEEAWENHLKR	3	VVAEEAWENHLKR3	10150.3	9856.13	
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	VVAEEAWENHLKR	VVAEEAWENHLKR	4	VVAEEAWENHLKR4	9641.51	5432.88	4878.75
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	VVAEEFR	VVAEEFR	1	VVAEEFR1	134826	94123.4	87688
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	VVAEEFR	VVAEEFR	2	VVAEEFR2	1.26482e+08	1.28707e+08	1.36076e+08
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	VVAEEFRDR	VVAEEFRDR	2	VVAEEFRDR2	54551.8	45882.9	57636.5
Q5M872	Q5M872	DPEP2_RAT	Dpep2	Dipeptidase 2	1	VVAEMNR	VVAEMNR	2	VVAEMNR2	29852.6	50828.7	49218.2
Q91XJ1	Q91XJ1	BECN1_RAT	Becn1	Beclin-1	1	VVAENLEK	VVAENLEK	2	VVAENLEK2	59274.6	61966.2	77340.4
D3ZG43	D3ZG43	D3ZG43_RAT	Ndufs3	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial	1	VVAEPVELAQEFR	VVAEPVELAQEFR	2	VVAEPVELAQEFR2	62513.1	55449.1	71118.7
D3ZG43	D3ZG43	D3ZG43_RAT	Ndufs3	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial	1	VVAEPVELAQEFRK	VVAEPVELAQEFRK	3	VVAEPVELAQEFRK3		34364.7	14578
D3ZRM5	D3ZRM5	D3ZRM5_RAT	Rab23	RAB23, member RAS oncogene family	1	VVAEVGDIPTALVQNK	VVAEVGDIPTALVQNK	2	VVAEVGDIPTALVQNK2	2787.52	2710.85	
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	VVAFKPEHPGLWAIK	VVAFKPEHPGLWAIK	3	VVAFKPEHPGLWAIK3	3687.89	6919.73	6269.38
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	VVAFKPEHPGLWAIK	VVAFKPEHPGLWAIK	4	VVAFKPEHPGLWAIK4	14517.7	17273.9	15389.7
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	VVAFSSVTELK	VVAFSSVTELK	2	VVAFSSVTELK2	26104.9	17105	19840.4
P30835	P30835	PFKAL_RAT	Pfkl	ATP-dependent 6-phosphofructokinase, liver type	1	VVAFSSVTELKK	VVAFSSVTELKK	3	VVAFSSVTELKK3	19818	14584.1	10946.7
P02091	P11517;P02091	HBB1_RAT	Hbb	Hemoglobin subunit beta-1	0	VVAGVASALAHK	VVAGVASALAHK	2	VVAGVASALAHK2	296860	292569	227186
P02091	P11517;P02091	HBB1_RAT	Hbb	Hemoglobin subunit beta-1	0	VVAGVASALAHKYH	VVAGVASALAHKYH	3	VVAGVASALAHKYH3		7134.37	8914.58
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	VVAGVLHLGNIDFEEAGSTSGGCNLK	VVAGVLHLGNIDFEEAGSTSGGC(UniMod:4)NLK	3	VVAGVLHLGNIDFEEAGSTSGGC(UniMod:4)NLK3	11669.9	8706.99	11026.4
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VVAHGVEVAVR	VVAHGVEVAVR	2	VVAHGVEVAVR2	92783.4	93483.6	72072.8
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VVAHGVEVAVRR	VVAHGVEVAVRR	3	VVAHGVEVAVRR3	11802.6	16362.4	12725.6
Q8VHE9	Q8VHE9	RETST_RAT	Retsat	All-trans-retinol 13,14-reductase	1	VVAHGVSHAILLK	VVAHGVSHAILLK	3	VVAHGVSHAILLK3	3462.78	2637.63	
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	VVAHLTVQPR	VVAHLTVQPR	2	VVAHLTVQPR2	3844.66	8168.99	8219.3
A0A8I5ZZ89	A0A8I5ZZ89	A0A8I5ZZ89_RAT	Elp3	Elongator complex protein 3	1	VVAHMMPDLPNVGLER	VVAHMMPDLPNVGLER	3	VVAHMMPDLPNVGLER3	2536.93	3677.35	10343
Q5XIE4	Q5XIE4	Q5XIE4_RAT	Rchy1	Ring finger and CHY zinc finger domain containing 1	1	VVAHVLPCGHLLHR	VVAHVLPC(UniMod:4)GHLLHR	4	VVAHVLPC(UniMod:4)GHLLHR4	4928.15	3317.43	
Q9QZM5	A0A8I5ZLD3;Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	0	VVAIYDYTK	VVAIYDYTK	2	VVAIYDYTK2	296646	254383	273627
Q9QZM5	Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	1	VVAIYDYTKDKDDELSFK	VVAIYDYTKDKDDELSFK	3	VVAIYDYTKDKDDELSFK3	13657.4	20159.9	29824.9
Q9QZM5	Q9QZM5	ABI1_RAT	Abi1	Abl interactor 1	1	VVAIYDYTKDKDDELSFK	VVAIYDYTKDKDDELSFK	4	VVAIYDYTKDKDDELSFK4	26125.2	25341.2	23277.3
F1MAA4	F1MAA4	F1MAA4_RAT	Atp13a2	ATPase cation transporting 13A2	1	VVALAGKPLPTAPSLEAAQQLTR	VVALAGKPLPTAPSLEAAQQLTR	3	VVALAGKPLPTAPSLEAAQQLTR3	7500.52	9039	13016.2
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	VVALEQQVLMLTK	VVALEQQVLMLTK	2	VVALEQQVLMLTK2	6140.1	9581.25	7424.29
E9PU15	E9PU15	E9PU15_RAT	Dicer1	Endoribonuclease Dicer	1	VVALICCEK	VVALIC(UniMod:4)C(UniMod:4)EK	2	VVALIC(UniMod:4)C(UniMod:4)EK2	7558.62	5927.97	3991.48
D3ZZL9	D3ZZL9	GCC2_RAT	Gcc2	GRIP and coiled-coil domain-containing protein 2	1	VVALQEESR	VVALQEESR	2	VVALQEESR2	9820.95	8115.21	8075.77
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	VVALSNNK	VVALSNNK	1	VVALSNNK1	1467.79		
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	VVALSNNK	VVALSNNK	2	VVALSNNK2	874209	1.29677e+06	1.01511e+06
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	VVALSNNKK	VVALSNNKK	2	VVALSNNKK2	308477	434943	449717
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	VVALYDYMPMNANDLQLR	VVALYDYMPMNANDLQLR	3	VVALYDYMPMNANDLQLR3	18747.1	13898.2	17728.5
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	VVALYDYMPMNANDLQLRK	VVALYDYMPMNANDLQLRK	3	VVALYDYMPMNANDLQLRK3	2436.23	6389.58	5360.82
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	VVANLAHPPAE	VVANLAHPPAE	2	VVANLAHPPAE2	98573.8	101801	100320
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	VVAPFMSNIPLLLYPQDRPR	VVAPFMSNIPLLLYPQDRPR	3	VVAPFMSNIPLLLYPQDRPR3	490732	657209	649949
P10960	P10960	SAP_RAT	Psap	Prosaposin	1	VVAPFMSNIPLLLYPQDRPR	VVAPFMSNIPLLLYPQDRPR	4	VVAPFMSNIPLLLYPQDRPR4	33665.2	26915.1	36255.8
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	VVAPTISSPVCQEQLVEAGR	VVAPTISSPVC(UniMod:4)QEQLVEAGR	3	VVAPTISSPVC(UniMod:4)QEQLVEAGR3	1.40119e+06	1.52472e+06	1.65817e+06
P58365	P58365	CAD23_RAT	Cdh23	Cadherin-23	1	VVASDAGTPTK	VVASDAGTPTK	2	VVASDAGTPTK2		10387.7	
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	VVASGLNYK	VVASGLNYK	2	VVASGLNYK2	19936.4	29990.2	24663.2
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	VVASGPGLEHGK	VVASGPGLEHGK	2	VVASGPGLEHGK2	2004.02	741.946	
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	VVASGPGLEHGK	VVASGPGLEHGK	3	VVASGPGLEHGK3	8170.15	10449.6	15563.1
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	VVASLTEGTAVSEYWSVILSEVQR	VVASLTEGTAVSEYWSVILSEVQR	3	VVASLTEGTAVSEYWSVILSEVQR3	17810.7	4301.56	
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	VVATAPGCGVIECIPDCTSR	VVATAPGC(UniMod:4)GVIEC(UniMod:4)IPDC(UniMod:4)TSR	3	VVATAPGC(UniMod:4)GVIEC(UniMod:4)IPDC(UniMod:4)TSR3	26085.4	25572.1	22492.6
P15684	P15684	AMPN_RAT	Anpep	Aminopeptidase N	1	VVATTQMQAADAR	VVATTQMQAADAR	2	VVATTQMQAADAR2	15427.5	15668	18651.2
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	VVAVADDFCK	VVAVADDFC(UniMod:4)K	2	VVAVADDFC(UniMod:4)K2	34035	41856.5	33034.1
I6LBX3	I6LBX3	I6LBX3_RAT	Pcdhga5	Protocadherin gamma subfamily A, 1	1	VVAVDKDSGQNAWLSYR	VVAVDKDSGQNAWLSYR	3	VVAVDKDSGQNAWLSYR3		7959.61	4968.02
A0A8I6A1V1	A0A8I6A1V1	A0A8I6A1V1_RAT	Ptprd	protein-tyrosine-phosphatase	1	VVAVNNIGR	VVAVNNIGR	2	VVAVNNIGR2	6238.99	3166.9	9755.27
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	VVAVRPAIQILHNTGLR	VVAVRPAIQILHNTGLR	3	VVAVRPAIQILHNTGLR3	31744.6	40827.6	26505.7
Q00657	Q00657	CSPG4_RAT	Cspg4	Chondroitin sulfate proteoglycan 4	1	VVAVRPAIQILHNTGLR	VVAVRPAIQILHNTGLR	4	VVAVRPAIQILHNTGLR4		60771.9	
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	VVAVSDGETK	VVAVSDGETK	2	VVAVSDGETK2	44337.7	38595	35020.5
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	VVAVSPANISR	VVAVSPANISR	2	VVAVSPANISR2	4799.52	8921.34	7987.04
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	VVAVSYDEWNR	VVAVSYDEWNR	2	VVAVSYDEWNR2	19820.7	13174.3	11367.3
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	VVAVSYDEWNRK	VVAVSYDEWNRK	3	VVAVSYDEWNRK3	21340.9	9785.63	23263.1
Q08603	Q08603	PGTB2_RAT	Rabggtb	Geranylgeranyl transferase type-2 subunit beta	1	VVAYVQSLQK	VVAYVQSLQK	2	VVAYVQSLQK2	5393.65	8892.56	
D4AEK3	D4AEK3	D4AEK3_RAT	Crim1	Cysteine rich transmembrane BMP regulator 1	1	VVCHFSGK	VVC(UniMod:4)HFSGK	2	VVC(UniMod:4)HFSGK2		57311.9	
A0A8I6AW91	A0A8I6AW91	A0A8I6AW91_RAT	Srp72	Signal recognition particle subunit SRP72	1	VVCLIQNGSFK	VVC(UniMod:4)LIQNGSFK	2	VVC(UniMod:4)LIQNGSFK2	4696.4	2875.44	
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	VVCSGLLQASNSNLISGSVMSIEK	VVC(UniMod:4)SGLLQASNSNLISGSVMSIEK	3	VVC(UniMod:4)SGLLQASNSNLISGSVMSIEK3	60826.2	58559.2	62400.8
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	VVDALGNAIDGK	VVDALGNAIDGK	2	VVDALGNAIDGK2	2.43588e+06	2.31417e+06	2.3135e+06
P15999	P15999	ATPA_RAT	Atp5f1a	ATP synthase subunit alpha, mitochondrial	1	VVDALGNAIDGKGPVGSK	VVDALGNAIDGKGPVGSK	3	VVDALGNAIDGKGPVGSK3	65910.5	139468	176366
P35565	P35565	CALX_RAT	Canx	Calnexin	1	VVDDWANDGWGLK	VVDDWANDGWGLK	2	VVDDWANDGWGLK2	371063	346777	378853
P35565	P35565	CALX_RAT	Canx	Calnexin	1	VVDDWANDGWGLK	VVDDWANDGWGLK	3	VVDDWANDGWGLK3	5133.64	4462.78	6686.37
P35565	P35565	CALX_RAT	Canx	Calnexin	1	VVDDWANDGWGLKK	VVDDWANDGWGLKK	2	VVDDWANDGWGLKK2	29976.3	36064.2	24557.7
P35565	P35565	CALX_RAT	Canx	Calnexin	1	VVDDWANDGWGLKK	VVDDWANDGWGLKK	3	VVDDWANDGWGLKK3	443018	463167	521869
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	VVDEGESLR	VVDEGESLR	2	VVDEGESLR2	5657.62	15183.1	16332
Q63372	Q63372;Q63374	NRX1A_RAT	Nrxn1	Neurexin-1	0	VVDEWLLDK	VVDEWLLDK	2	VVDEWLLDK2	20376.5	21267.3	18791.5
P05708	P05708	HXK1_RAT	Hk1	Hexokinase-1	1	VVDEYSLNSGK	VVDEYSLNSGK	2	VVDEYSLNSGK2	142070	144611	147281
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	VVDFAHHLEHVTPPLAQDTLQEVHR	VVDFAHHLEHVTPPLAQDTLQEVHR	3	VVDFAHHLEHVTPPLAQDTLQEVHR3	4444.41		
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	VVDFAHHLEHVTPPLAQDTLQEVHR	VVDFAHHLEHVTPPLAQDTLQEVHR	4	VVDFAHHLEHVTPPLAQDTLQEVHR4	40853.1	29482.3	46405.9
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	VVDFDETWNK	VVDFDETWNK	2	VVDFDETWNK2	15804.3	23212.6	13504.1
P08461	A0A8I6B5J2;P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	0	VVDGAVGAQWLAEFK	VVDGAVGAQWLAEFK	2	VVDGAVGAQWLAEFK2	23790.8	17883	18236
P08461	A0A8I6B5J2;P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	0	VVDGAVGAQWLAEFKK	VVDGAVGAQWLAEFKK	3	VVDGAVGAQWLAEFKK3	18533.9	15948.5	11024.6
F1M9C9	F1M9C9	F1M9C9_RAT	Hars2	histidine--tRNA ligase	1	VVDGMFAVCGVPESK	VVDGMFAVC(UniMod:4)GVPESK	2	VVDGMFAVC(UniMod:4)GVPESK2	1220.3		
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	VVDIPGLK	VVDIPGLK	2	VVDIPGLK2	1.0977e+06	1.09569e+06	972257
P80385	A0A140UHX4;P80385	AAKG1_RAT	Prkag1	5'-AMP-activated protein kinase subunit gamma-1	0	VVDIYSK	VVDIYSK	2	VVDIYSK2	74019.5	88047.1	99331.4
F1LT49	F1LT49	F1LT49_RAT	Lrrc47	Leucine rich repeat containing 47	1	VVDLEGSLK	VVDLEGSLK	2	VVDLEGSLK2	21997.3	25707.1	15247.2
P10719	P10719	ATPB_RAT	Atp5f1b	ATP synthase subunit beta, mitochondrial	1	VVDLLAPYAK	VVDLLAPYAK	2	VVDLLAPYAK2	2.15844e+06	1.93455e+06	2.20658e+06
D4AEP0	D4AEP0	D4AEP0_RAT	Adss	Adenylosuccinate synthetase isozyme 2	1	VVDLLAQDADIVCR	VVDLLAQDADIVC(UniMod:4)R	2	VVDLLAQDADIVC(UniMod:4)R2	22931	21565.4	27592
D4A3V2	D4A3V2	D4A3V2_RAT	Ndufa6	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6	1	VVDLLVIK	VVDLLVIK	2	VVDLLVIK2	149206	135285	120775
P04797	A0A0G2K7M1;F1LUV3;F1LUI2;M0R660;D3ZEN2;E9PTN6;M0R7H7;A0A0G2K8S2;D3ZQT0;D3ZGY4;E9PTV9;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	VVDLMAYMASK	VVDLMAYMASK	2	VVDLMAYMASK2	739254	656436	742202
P04797	A0A0G2K7M1;F1LUV3;M0R660;D3ZEN2;E9PTN6;M0R7H7;A0A0G2K8S2;D3ZQT0;D3ZGY4;E9PTV9;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	VVDLMAYMASKE	VVDLMAYMASKE	2	VVDLMAYMASKE2	1.33085e+06	1.51471e+06	1.51116e+06
P04797	A0A0G2K7M1;F1LUV3;M0R660;D3ZEN2;E9PTN6;M0R7H7;A0A0G2K8S2;D3ZQT0;D3ZGY4;E9PTV9;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	VVDLMAYMASKE	VVDLMAYMASKE	3	VVDLMAYMASKE3	58033.2	59631.4	51782.1
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	VVDLVGYR	VVDLVGYR	2	VVDLVGYR2	43551.9	35623	32585.9
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	VVDNASQGEGVR	VVDNASQGEGVR	2	VVDNASQGEGVR2	11836.3		5542.44
G3V6Q3	A0A8I5Y6K0;G3V6Q3	G3V6Q3_RAT	Wdr13	Uncharacterized protein	0	VVDNEGALQLK	VVDNEGALQLK	2	VVDNEGALQLK2	15484.7	22099.5	16420.2
G3V6Q3	A0A8I5Y6K0;G3V6Q3	G3V6Q3_RAT	Wdr13	Uncharacterized protein	0	VVDNEGALQLKR	VVDNEGALQLKR	3	VVDNEGALQLKR3			7455.67
P10536	P10536	RAB1B_RAT	Rab1b	Ras-related protein Rab-1B	1	VVDNTTAK	VVDNTTAK	2	VVDNTTAK2			884728
P49242	P49242;M0R6L4	RS3A_RAT	Rps3a	Small ribosomal subunit protein eS1	0	VVDPFSK	VVDPFSK	2	VVDPFSK2	53186.3	41574.9	40564
P47727	P47727	CBR1_RAT	Cbr1	Carbonyl reductase [NADPH] 1	1	VVDPTPFHIQAEVTMK	VVDPTPFHIQAEVTMK	3	VVDPTPFHIQAEVTMK3	11253.2	11654.6	
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	VVDQENPREEK	VVDQENPREEK	2	VVDQENPREEK2			12875.5
P15943	P15943	APLP2_RAT	Aplp2	Amyloid beta precursor like protein 2	1	VVDSDSTMSK	VVDSDSTMSK	2	VVDSDSTMSK2	113217	100046	
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	VVDSGTSDFAISNR	VVDSGTSDFAISNR	2	VVDSGTSDFAISNR2	11521.6	8569.17	12833.5
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	VVDSHPSGLQLMYNK	VVDSHPSGLQLMYNK	3	VVDSHPSGLQLMYNK3	30931.2	33632.4	23680.9
Q505J8	Q505J8	SYFA_RAT	Farsa	Phenylalanine--tRNA ligase alpha subunit	1	VVDSIEDEVQR	VVDSIEDEVQR	2	VVDSIEDEVQR2	17783.6	16460	18524.4
O35244	A0A8I6ASU0;O35244	PRDX6_RAT	Prdx6	Peroxiredoxin-6	0	VVDSLQLTASNPVATPVDWK	VVDSLQLTASNPVATPVDWK	3	VVDSLQLTASNPVATPVDWK3	14531.4	8750.6	8126.3
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	VVDSLYNK	VVDSLYNK	1	VVDSLYNK1	1554.64		3563.69
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	VVDSLYNK	VVDSLYNK	2	VVDSLYNK2	365286	356612	370792
Q3B8R7	Q3B8R7	Q3B8R7_RAT	Mrpl47	Mitochondrial ribosomal protein L47	1	VVDSMDALDK	VVDSMDALDK	2	VVDSMDALDK2	12763.9	14126.2	14513
A0A8I6AML4	A0A8I6AML4	A0A8I6AML4_RAT	Galc	Galactocerebrosidase	1	VVDVIGAHYPGTYTVWNAK	VVDVIGAHYPGTYTVWNAK	3	VVDVIGAHYPGTYTVWNAK3	16746	13121.2	5981.47
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	VVDVIGTK	VVDVIGTK	1	VVDVIGTK1	4425.41	5108.4	2233.38
P12369	P12369	KAP3_RAT	Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit	1	VVDVIGTK	VVDVIGTK	2	VVDVIGTK2	1.95867e+06	2.01713e+06	2.18955e+06
F7EKI5	F7EKI5	F7EKI5_RAT	Pcdh18	Protocadherin 18	1	VVDVNDNKPEISINLMSPGK	VVDVNDNKPEISINLMSPGK	3	VVDVNDNKPEISINLMSPGK3	22764.1	29548.2	10943.5
Q6NYB7	A0A8I6A3I5;Q6NYB7	RAB1A_RAT	Rab1A	Ras-related protein Rab-1A	0	VVDYTTAK	VVDYTTAK	2	VVDYTTAK2	1.03983e+06	1.05981e+06	1.22075e+06
Q99MA2	Q99MA2	XPP2_RAT	Xpnpep2	Xaa-Pro aminopeptidase 2	1	VVEAFAR	VVEAFAR	2	VVEAFAR2	191987	211392	206882
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	VVECQLETHNR	VVEC(UniMod:4)QLETHNR	3	VVEC(UniMod:4)QLETHNR3	12289.8	7875.74	
Q9JIH7	Q9JIH7	WNK1_RAT	Wnk1	Serine/threonine-protein kinase WNK1	1	VVECQLETHNRK	VVEC(UniMod:4)QLETHNRK	3	VVEC(UniMod:4)QLETHNRK3	9345.54	9890.19	
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	VVECQLQTHNSK	VVEC(UniMod:4)QLQTHNSK	2	VVEC(UniMod:4)QLQTHNSK2	2863.35	1868	
Q7TPK6	Q7TPK6	WNK4_RAT	Wnk4	Serine/threonine-protein kinase WNK4	1	VVECQLQTHNSK	VVEC(UniMod:4)QLQTHNSK	3	VVEC(UniMod:4)QLQTHNSK3	42139	32893.8	41301.8
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	VVEDDEDDFPTTR	VVEDDEDDFPTTR	2	VVEDDEDDFPTTR2	53272.3	41214.9	58384.6
Q561S0	A0A1W2Q6F8;Q561S0	NDUAA_RAT	Ndufa10	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial	0	VVEDIEYLNYNK	VVEDIEYLNYNK	2	VVEDIEYLNYNK2	66134.1	70355.8	66067.6
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	VVEDLISHYVVVFSVDEEELRK	VVEDLISHYVVVFSVDEEELRK	3	VVEDLISHYVVVFSVDEEELRK3	12085.6	6870.14	5326.17
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	VVEDLISHYVVVFSVDEEELRK	VVEDLISHYVVVFSVDEEELRK	4	VVEDLISHYVVVFSVDEEELRK4	15596.2	15914.2	11402.7
D4A7Z0	D4A7Z0	D4A7Z0_RAT	Wdtc1	WD and tetratricopeptide repeats 1	1	VVEDMEGASQANQR	VVEDMEGASQANQR	2	VVEDMEGASQANQR2	9060.12	3020.44	4488.33
P14882	P14882	PCCA_RAT	Pcca	Propionyl-CoA carboxylase alpha chain, mitochondrial	1	VVEEAPSIFLDPETR	VVEEAPSIFLDPETR	2	VVEEAPSIFLDPETR2	28418.8	27083.5	27205.1
A0A8I6A5X2	A0A8I6A5X2	A0A8I6A5X2_RAT	Usp32	ubiquitinyl hydrolase 1	1	VVEEHESVEQSR	VVEEHESVEQSR	3	VVEEHESVEQSR3	8367.33		11020
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	VVEEIRR	VVEEIRR	2	VVEEIRR2		1073.67	
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	VVEELEDRPELQHVYLHK	VVEELEDRPELQHVYLHK	4	VVEELEDRPELQHVYLHK4	5695.29	7272.59	
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	VVEELTR	VVEELTR	2	VVEELTR2	227772	206126	184794
B0BNH1	B0BNH1	B0BNH1_RAT	Gnptg	N-acetylglucosamine-1-phosphate transferase subunit gamma	1	VVEEPNTFGLNNPFLPQASR	VVEEPNTFGLNNPFLPQASR	3	VVEEPNTFGLNNPFLPQASR3	24251.9	22080.8	26113.3
Q62930	Q62930	CO9_RAT	C9	Complement component C9	1	VVEESELGR	VVEESELGR	2	VVEESELGR2	5.62485e+06	4.71612e+06	4.81758e+06
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	VVEESWNAYPYTR	VVEESWNAYPYTR	2	VVEESWNAYPYTR2	52148.1	51674	53335.8
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	VVEESWNAYPYTR	VVEESWNAYPYTR	3	VVEESWNAYPYTR3	8050.7	7001.23	8085.12
D3ZHB7	D3ZHB7	D3ZHB7_RAT	Ube3c	HECT-type E3 ubiquitin transferase	1	VVEGFTDEEK	VVEGFTDEEK	2	VVEGFTDEEK2	63042.8	84692.8	94507.9
B4F785	B4F785	EGFLA_RAT	Egflam	Pikachurin	1	VVEGMAEGGFTQIK	VVEGMAEGGFTQIK	2	VVEGMAEGGFTQIK2	1617.07	4460.4	2726.47
P63035	P63035	CYH2_RAT	Cyth2	Cytohesin-2	1	VVEGNHMVYR	VVEGNHMVYR	3	VVEGNHMVYR3	10307.3	11797.9	
P97694	P97694	CYH1_RAT	Cyth1	Cytohesin-1	1	VVEGNHTVYR	VVEGNHTVYR	2	VVEGNHTVYR2	8816.67	1087.63	5804.02
P97694	P97694	CYH1_RAT	Cyth1	Cytohesin-1	1	VVEGNHTVYR	VVEGNHTVYR	3	VVEGNHTVYR3	41460.2	36780.7	48216.4
P97696	P97696	CYH3_RAT	Cyth3	Cytohesin-3	1	VVEGNHVVYR	VVEGNHVVYR	3	VVEGNHVVYR3	15177.1	10623.7	9249.82
P50398	P50398	GDIA_RAT	Gdi1	Rab GDP dissociation inhibitor alpha	1	VVEGSFVYK	VVEGSFVYK	2	VVEGSFVYK2	76189.7	86387.2	70474.4
O08984	O08984	LBR_RAT	Lbr	Delta(14)-sterol reductase LBR	1	VVEGTPLVDGR	VVEGTPLVDGR	2	VVEGTPLVDGR2	17124.4	40199.8	17981.9
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	VVEHGLFVK	VVEHGLFVK	2	VVEHGLFVK2	1721.75	1387.05	
O55096	O55096	DPP3_RAT	Dpp3	Dipeptidyl peptidase 3	1	VVEHLEK	VVEHLEK	2	VVEHLEK2	34593.9		18603.6
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	VVEHNIR	VVEHNIR	2	VVEHNIR2	14906.9		30924.7
P52873	P52873	PYC_RAT	Pc	Pyruvate carboxylase, mitochondrial	1	VVEIAPATHLDPQLR	VVEIAPATHLDPQLR	3	VVEIAPATHLDPQLR3	13760.1	12383	14207.4
Q5PQN6	Q5PQN6	SPE39_RAT	Vipas39	Spermatogenesis-defective protein 39 homolog	1	VVEILHK	VVEILHK	2	VVEILHK2	4308.06	5356.71	
P0CE43	P0CE43	GRB10_RAT	Grb10	Growth factor receptor-bound protein 10	1	VVEILTDMTAR	VVEILTDMTAR	2	VVEILTDMTAR2	29301.9	31319.5	30719.8
B1H264	B1H264	B1H264_RAT	Tbc1d17	TBC1 domain family, member 17	1	VVEKDNDVLLHWAPVEEAGDPTQIFFSK	VVEKDNDVLLHWAPVEEAGDPTQIFFSK	4	VVEKDNDVLLHWAPVEEAGDPTQIFFSK4	12436.3	13922.7	9761.36
D3ZZM3	D3ZZM3	D3ZZM3_RAT	Cog4	Conserved oligomeric Golgi complex subunit 4	1	VVEKELDALLEQQNTIESK	VVEKELDALLEQQNTIESK	3	VVEKELDALLEQQNTIESK3	4041.9	6732.59	8292.01
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	VVELDNSIPVLLTPSGNDMK	VVELDNSIPVLLTPSGNDMK	3	VVELDNSIPVLLTPSGNDMK3	13120	9918.59	11336.4
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	VVELEDCITQR	VVELEDC(UniMod:4)ITQR	2	VVELEDC(UniMod:4)ITQR2	13704	11226	9083.32
A0A0G2K1A4	A0A0G2K1A4	A0A0G2K1A4_RAT	Evi5l	Ecotropic viral integration site 5-like	1	VVELETQDNIHR	VVELETQDNIHR	3	VVELETQDNIHR3	8909.71	13691.1	11847.8
Q68FY0	Q68FY0	QCR1_RAT	Uqcrc1	Cytochrome b-c1 complex subunit 1, mitochondrial	1	VVELLADIVQNISLEDSQIEK	VVELLADIVQNISLEDSQIEK	3	VVELLADIVQNISLEDSQIEK3	5254.77		
Q68FY0	Q68FY0	QCR1_RAT	Uqcrc1	Cytochrome b-c1 complex subunit 1, mitochondrial	1	VVELLADIVQNISLEDSQIEKER	VVELLADIVQNISLEDSQIEKER	3	VVELLADIVQNISLEDSQIEKER3	8794.28	19383.5	15243.4
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	VVELTQGLR	VVELTQGLR	2	VVELTQGLR2	5.63094e+06	5.65117e+06	6.33192e+06
O88201	O88201	CLC11_RAT	Clec11a	C-type lectin domain family 11 member A	1	VVELTQGLRR	VVELTQGLRR	3	VVELTQGLRR3	621005	916738	990796
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	VVELVDAVYGPYKPYQLK	VVELVDAVYGPYKPYQLK	3	VVELVDAVYGPYKPYQLK3	32099.6	17397.2	19920.9
F1M4J1	F1M4J1	F1M4J1_RAT	LOC100294508	Dyslexia susceptibility 2-like	1	VVEMQGVR	VVEMQGVR	2	VVEMQGVR2	48744.8	49821.8	32316.2
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	VVEMTDQLMVPTLGSQEGAFENVR	VVEMTDQLMVPTLGSQEGAFENVR	3	VVEMTDQLMVPTLGSQEGAFENVR3	16108.6	19097.9	21223
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	VVEMVEEK	VVEMVEEK	2	VVEMVEEK2	34236	34544.8	35312.5
F1M8K0	F1M8K0	F1M8K0_RAT	Dag1	Dystroglycan 1	1	VVENGALLSWK	VVENGALLSWK	2	VVENGALLSWK2	5352.4		
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	VVENLQDDFDFNYK	VVENLQDDFDFNYK	2	VVENLQDDFDFNYK2	15480.9	12550	10905.5
A0A8I5ZYN9	A0A8I5ZYN9	A0A8I5ZYN9_RAT	Ipo11-ps1	Similar to importin 11	1	VVENTLK	VVENTLK	2	VVENTLK2	37682.3	47269.9	34255.3
D3ZDR7	D3ZDR7	D3ZDR7_RAT	Themis2	Thymocyte selection associated family member 2	1	VVEPKPSCPQLER	VVEPKPSC(UniMod:4)PQLER	3	VVEPKPSC(UniMod:4)PQLER3	9865.72	12571.8	4562.92
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	VVEQEGTTPEESPNPDHPR	VVEQEGTTPEESPNPDHPR	3	VVEQEGTTPEESPNPDHPR3	1.70599e+06	1.76533e+06	1.76373e+06
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	VVEQEGTTPEESPNPDHPR	VVEQEGTTPEESPNPDHPR	4	VVEQEGTTPEESPNPDHPR4	15110.7	13570.9	7585.16
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	VVEQGMFVK	VVEQGMFVK	2	VVEQGMFVK2	121961	125489	136818
D4A415	D4A415	D4A415_RAT	Abraxas2	Abraxas 2, BRISC complex subunit	1	VVESCQAEVNK	VVESC(UniMod:4)QAEVNK	2	VVESC(UniMod:4)QAEVNK2	42662	69480	54659.6
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	VVESSDCTTK	VVESSDC(UniMod:4)TTK	2	VVESSDC(UniMod:4)TTK2			45753.3
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	VVETDPSPYCIVAPDTVIHCEGEPIK	VVETDPSPYC(UniMod:4)IVAPDTVIHC(UniMod:4)EGEPIK	3	VVETDPSPYC(UniMod:4)IVAPDTVIHC(UniMod:4)EGEPIK3	1.53279e+06	1.54039e+06	1.57546e+06
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	VVETDPSPYCIVAPDTVIHCEGEPIK	VVETDPSPYC(UniMod:4)IVAPDTVIHC(UniMod:4)EGEPIK	4	VVETDPSPYC(UniMod:4)IVAPDTVIHC(UniMod:4)EGEPIK4	75059.4	62845.3	57358.1
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	VVETDPSPYCIVAPDTVIHCEGEPIKR	VVETDPSPYC(UniMod:4)IVAPDTVIHC(UniMod:4)EGEPIKR	4	VVETDPSPYC(UniMod:4)IVAPDTVIHC(UniMod:4)EGEPIKR4	74492.5	55216	85815.1
Q5U316	Q5U316	RAB35_RAT	Rab35	Ras-related protein Rab-35	1	VVETEDAYK	VVETEDAYK	2	VVETEDAYK2	223035	236228	224014
P11980	A0A8I6AKN1;A0A8I6A7K2;P11980	KPYM_RAT	Pkm	Pyruvate kinase PKM	0	VVEVGSK	VVEVGSK	1	VVEVGSK1	3709.63	5406.04	
Q9R0C5	Q9R0C5	GALT7_RAT	Galnt7	N-acetylgalactosaminyltransferase 7	1	VVEVWWDEYK	VVEVWWDEYK	2	VVEVWWDEYK2	7959.73		7185.28
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	VVFAELACR	VVFAELAC(UniMod:4)R	2	VVFAELAC(UniMod:4)R2	92514.7	129378	89845.1
Q66H63	Q66H63	GDAP2_RAT	Gdap2	Ganglioside-induced differentiation-associated-protein 2	1	VVFAISELEEATYQK	VVFAISELEEATYQK	2	VVFAISELEEATYQK2	8918.58	7654.55	8334.41
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	VVFAPTSIFTDDFVIPDISEPGTWK	VVFAPTSIFTDDFVIPDISEPGTWK	3	VVFAPTSIFTDDFVIPDISEPGTWK3	6773.94		
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	VVFAPTSIFTDDFVIPDISEPGTWK	VVFAPTSIFTDDFVIPDISEPGTWK	4	VVFAPTSIFTDDFVIPDISEPGTWK4		3802.21	6458.3
A0A0G2K435	A0A0G2K435	A0A0G2K435_RAT	Dnajc7	DnaJ heat shock protein family (Hsp40) member C7	1	VVFCMDR	VVFC(UniMod:4)MDR	2	VVFC(UniMod:4)MDR2	6200.37	11874.8	
P13676	P13676	ACPH_RAT	Apeh	Acylamino-acid-releasing enzyme	1	VVFDSAQR	VVFDSAQR	2	VVFDSAQR2	324408	371362	349025
D4A9N5	D4A9N5	D4A9N5_RAT	Trim25	Tripartite motif-containing 25	1	VVFDYNTAHNK	VVFDYNTAHNK	3	VVFDYNTAHNK3	7477.62	3925.98	5716.54
A0A096MJT6	A0A096MJT6	A0A096MJT6_RAT	Bltp1	Similar to RIKEN cDNA D630029K19	1	VVFENEQDSNSLTK	VVFENEQDSNSLTK	2	VVFENEQDSNSLTK2	989.645	1945.08	
P48500	A0A0G2JWU1;A0A8I5ZVI4;P48500	TPIS_RAT	Tpi1	Triosephosphate isomerase	0	VVFEQTK	VVFEQTK	2	VVFEQTK2	341425	369966	361290
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	VVFGPELVTLDPEEQFTVLSLSAGR	VVFGPELVTLDPEEQFTVLSLSAGR	3	VVFGPELVTLDPEEQFTVLSLSAGR3	2456.72	4366.11	3777.19
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	VVFGPELVTLDPEEQFTVLSLSAGRPK	VVFGPELVTLDPEEQFTVLSLSAGRPK	3	VVFGPELVTLDPEEQFTVLSLSAGRPK3	95581.7	123750	115946
Q62667	Q62667	MVP_RAT	Mvp	Major vault protein	1	VVFGPELVTLDPEEQFTVLSLSAGRPK	VVFGPELVTLDPEEQFTVLSLSAGRPK	4	VVFGPELVTLDPEEQFTVLSLSAGRPK4	18754.1	22392.8	18361.7
O35244	A0A8I6ASU0;O35244	PRDX6_RAT	Prdx6	Peroxiredoxin-6	0	VVFIFGPDK	VVFIFGPDK	2	VVFIFGPDK2	30369.4	34216.2	24044.2
O35244	A0A8I6ASU0;O35244	PRDX6_RAT	Prdx6	Peroxiredoxin-6	0	VVFIFGPDKK	VVFIFGPDKK	3	VVFIFGPDKK3	29392.5	18535.5	18012.7
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	VVFLNTR	VVFLNTR	2	VVFLNTR2	9.70962e+06	7.53644e+06	7.81912e+06
F1M625	A0A8I6A8N5;F1M625;D0RB01	UBP46_RAT	Usp46	Ubiquitin carboxyl-terminal hydrolase 46	0	VVFPLELR	VVFPLELR	2	VVFPLELR2	18284.4	14973.4	18202.1
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VVFQEFR	VVFQEFR	2	VVFQEFR2	1.72947e+07	2.09868e+07	2.14552e+07
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	VVFSIPCEPNLDALIQNQHK	VVFSIPC(UniMod:4)EPNLDALIQNQHK	3	VVFSIPC(UniMod:4)EPNLDALIQNQHK3	12562.8		12278.8
O70467	O70467	ANM3_RAT	Prmt3	Protein arginine N-methyltransferase 3	1	VVFSTGPQSTK	VVFSTGPQSTK	2	VVFSTGPQSTK2	27073.1	32034.2	21762.6
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	VVFTPSICK	VVFTPSIC(UniMod:4)K	2	VVFTPSIC(UniMod:4)K2	567751	580932	553876
A0A8I6AQB7	A0A8I6AQB7	A0A8I6AQB7_RAT	Opa3	Optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)	1	VVGAFPMAK	VVGAFPMAK	2	VVGAFPMAK2	29884.5	26766.3	23132.8
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	VVGALVDQGIFEELTR	VVGALVDQGIFEELTR	2	VVGALVDQGIFEELTR2	52429.2	39897.5	49013
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	VVGALVDQGIFEELTR	VVGALVDQGIFEELTR	3	VVGALVDQGIFEELTR3	9068.77	9894.44	3781.06
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	VVGAMQLYSVDR	VVGAMQLYSVDR	2	VVGAMQLYSVDR2	683796	721451	728174
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	VVGAMQLYSVDRK	VVGAMQLYSVDRK	2	VVGAMQLYSVDRK2	21185.9		13154.2
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	VVGAMQLYSVDRK	VVGAMQLYSVDRK	3	VVGAMQLYSVDRK3	667897	759064	802865
P63324	A0A8I6GKR8;A0A8I6AWW2;A0A8I6G807;D3ZHB3;P63324;D3ZEB8;A0A8I6AKK1;D3ZG05	RS12_RAT	Rps12	Small ribosomal subunit protein eS12	0	VVGCSCVVVK	VVGC(UniMod:4)SC(UniMod:4)VVVK	2	VVGC(UniMod:4)SC(UniMod:4)VVVK2	118263	118387	103388
Q9Z2Q4	Q9Z2Q4	METH_RAT	Mtr	Methionine synthase	1	VVGDLFGAGK	VVGDLFGAGK	2	VVGDLFGAGK2	6398.03	7489.26	7593.1
D4A3I5	D4A3I5	D4A3I5_RAT	Fhip2a	FHF complex subunit HOOK interacting protein 2A	1	VVGDLMVR	VVGDLMVR	2	VVGDLMVR2	36817	29197	32399.5
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	VVGDVAYDEAK	VVGDVAYDEAK	2	VVGDVAYDEAK2	65633.6	59066.6	56342.3
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	VVGDVAYDEAKEK	VVGDVAYDEAKEK	3	VVGDVAYDEAKEK3	26200	22737.5	28832.1
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	VVGEETQEVLDGLR	VVGEETQEVLDGLR	2	VVGEETQEVLDGLR2	22765.6	19962.9	24388.6
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	VVGEETQEVLDGLR	VVGEETQEVLDGLR	3	VVGEETQEVLDGLR3	11510.4	10712.4	16660.6
D4A3X7	D4A3X7	D4A3X7_RAT	Snx33	Sorting nexin	1	VVGFALQAEMNHFHQR	VVGFALQAEMNHFHQR	4	VVGFALQAEMNHFHQR4	4796.38	3804.08	1621.11
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	VVGFDAVMR	VVGFDAVMR	2	VVGFDAVMR2	26894.4	37661.2	30018.5
O89049	O89049	TRXR1_RAT	Txnrd1	Thioredoxin reductase 1, cytoplasmic	1	VVGFHVLGPNAGEVTQGFAAALK	VVGFHVLGPNAGEVTQGFAAALK	3	VVGFHVLGPNAGEVTQGFAAALK3	8005.18		6592.47
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	VVGGCVANPHSWPWQISLR	VVGGC(UniMod:4)VANPHSWPWQISLR	3	VVGGC(UniMod:4)VANPHSWPWQISLR3	1.15818e+06	918150	1.3055e+06
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	VVGGENAK	VVGGENAK	1	VVGGENAK1			370190
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	VVGGENAK	VVGGENAK	2	VVGGENAK2			1.39889e+06
F7FMS0	F7FMS0	F7FMS0_RAT	Mst1	Macrophage stimulating 1	1	VVGGHPGNSPWTVSLR	VVGGHPGNSPWTVSLR	3	VVGGHPGNSPWTVSLR3	30673.9	29633.3	29437.8
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	VVGGKPAEMGDYPWQVAIK	VVGGKPAEMGDYPWQVAIK	3	VVGGKPAEMGDYPWQVAIK3	287201	248763	277132
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	VVGGKPAEMGDYPWQVAIKDGDR	VVGGKPAEMGDYPWQVAIKDGDR	4	VVGGKPAEMGDYPWQVAIKDGDR4	13131.9	10905.6	
Q6AYI8	Q6AYI8	Q6AYI8_RAT	Edem2	alpha-1,2-Mannosidase	1	VVGGLLSAHLLSK	VVGGLLSAHLLSK	3	VVGGLLSAHLLSK3	5007.95	2894.34	5423.18
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	VVGHTEATEEGDNEPK	VVGHTEATEEGDNEPK	2	VVGHTEATEEGDNEPK2	1982.84		5303.82
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	VVGHTEATEEGDNEPK	VVGHTEATEEGDNEPK	3	VVGHTEATEEGDNEPK3	11673.4		16993.7
P70619	P70619	GSHR_RAT	Gsr	Glutathione reductase (Fragment)	1	VVGIHMQGIGCDEMLQGFAVAVK	VVGIHMQGIGC(UniMod:4)DEMLQGFAVAVK	3	VVGIHMQGIGC(UniMod:4)DEMLQGFAVAVK3	5833.14	4141.22	
Q62636	Q62636;P62836	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	0	VVGKEQGQNLAR	VVGKEQGQNLAR	3	VVGKEQGQNLAR3	26316.9	26698.4	
G3V8G1	G3V8G1	G3V8G1_RAT	Agtpbp1	tubulin-glutamate carboxypeptidase	1	VVGLLAQLEK	VVGLLAQLEK	2	VVGLLAQLEK2	9665.92		6442.92
D3ZQ30	D3ZQ30	D3ZQ30_RAT	Telo2	Telomere length regulation protein TEL2 homolog	1	VVGLPDLLGNR	VVGLPDLLGNR	2	VVGLPDLLGNR2	16059.6	24185.2	23365.2
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	VVGNPFDSR	VVGNPFDSR	2	VVGNPFDSR2	609073	608982	570070
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	VVGPMGLLK	VVGPMGLLK	2	VVGPMGLLK2	76616.3	77270.5	87571.4
A0A8I6AIH6	A0A8I6AIH6	A0A8I6AIH6_RAT	Suclg2	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial	1	VVGQLAQQMIGYNLATK	VVGQLAQQMIGYNLATK	2	VVGQLAQQMIGYNLATK2	41929.3	30974.6	40784.1
A0A8I6AIH6	A0A8I6AIH6	A0A8I6AIH6_RAT	Suclg2	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial	1	VVGQLAQQMIGYNLATK	VVGQLAQQMIGYNLATK	3	VVGQLAQQMIGYNLATK3	10776.2	17415.1	16492.6
D4A7F6	D4A7F6	D4A7F6_RAT	Colec10	Collectin subfamily member 10	1	VVGQLDISVAR	VVGQLDISVAR	2	VVGQLDISVAR2	715262	790570	768522
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	VVGSEFVQK	VVGSEFVQK	2	VVGSEFVQK2	339031	340110	299666
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	VVGSELIQK	VVGSELIQK	2	VVGSELIQK2	267724	251728	274143
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VVGTNSNPPEFTQTSYK	VVGTNSNPPEFTQTSYK	2	VVGTNSNPPEFTQTSYK2	94365.9	73925.3	85235.2
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VVGTNSNPPEFTQTSYK	VVGTNSNPPEFTQTSYK	3	VVGTNSNPPEFTQTSYK3	16979.3	22242.9	17012.7
A0A8I5ZM79	A0A8I5ZM79	A0A8I5ZM79_RAT	Psmd7	Proteasome 26S subunit, non-ATPase 7	1	VVGVLLGSWQK	VVGVLLGSWQK	2	VVGVLLGSWQK2	132371	111015	127310
B2RYM5	B2RYM5;A0A8I6AEX4	BRCC3_RAT	Brcc3	Lys-63-specific deubiquitinase BRCC36	0	VVGWYHSHPHITVWPSHVDVR	VVGWYHSHPHITVWPSHVDVR	4	VVGWYHSHPHITVWPSHVDVR4	7745.4	9304.36	
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	VVGYEGSSKPFFYNR	VVGYEGSSKPFFYNR	3	VVGYEGSSKPFFYNR3	34743.3	29142	32671.4
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	VVGYFVSGCDPAIMGIGPVPAITGALK	VVGYFVSGC(UniMod:4)DPAIMGIGPVPAITGALK	3	VVGYFVSGC(UniMod:4)DPAIMGIGPVPAITGALK3	41965.2	34891.5	39541.3
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	VVGYFVSGCDPAIMGIGPVPAITGALKK	VVGYFVSGC(UniMod:4)DPAIMGIGPVPAITGALKK	3	VVGYFVSGC(UniMod:4)DPAIMGIGPVPAITGALKK3	12034.4	14687.6	12569.9
B0K020	B0K020	CISD1_RAT	Cisd1	CDGSH iron-sulfur domain-containing protein 1	1	VVHAFDMEDLGDK	VVHAFDMEDLGDK	2	VVHAFDMEDLGDK2	10010.4	7974.61	5563.08
B0K020	B0K020	CISD1_RAT	Cisd1	CDGSH iron-sulfur domain-containing protein 1	1	VVHAFDMEDLGDK	VVHAFDMEDLGDK	3	VVHAFDMEDLGDK3	88511.9	97592.5	94395.1
M0R5F1	M0R5F1	M0R5F1_RAT	Aspn	Asporin	1	VVHCSDLGLTSVPSNIPFDTR	VVHC(UniMod:4)SDLGLTSVPSNIPFDTR	3	VVHC(UniMod:4)SDLGLTSVPSNIPFDTR3	237937	245179	292747
A0A8I5ZQE9	A0A8I5ZQE9	A0A8I5ZQE9_RAT	Irf9	Interferon regulatory factor 9	1	VVHEIQVHSLDCR	VVHEIQVHSLDC(UniMod:4)R	3	VVHEIQVHSLDC(UniMod:4)R3	3192.27		
A0A8I5ZQE9	A0A8I5ZQE9	A0A8I5ZQE9_RAT	Irf9	Interferon regulatory factor 9	1	VVHEIQVHSLDCR	VVHEIQVHSLDC(UniMod:4)R	4	VVHEIQVHSLDC(UniMod:4)R4	1215.38	5058.4	2711.83
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	VVHFAEPGAGTK	VVHFAEPGAGTK	2	VVHFAEPGAGTK2	4116.87	2236.3	
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	VVHFAEPGAGTK	VVHFAEPGAGTK	3	VVHFAEPGAGTK3	28715.3	30493.7	26431.3
O08730	O08730	GLYG_RAT	Gyg1	Glycogenin-1	1	VVHFLGR	VVHFLGR	2	VVHFLGR2	19215.1	22290.9	19047.1
Q5FVN1	Q5FVN1	STBD1_RAT	Stbd1	Starch-binding domain-containing protein 1	1	VVHGWWGIH	VVHGWWGIH	2	VVHGWWGIH2			2612.16
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	VVHHFLLTCQVLQEHR	VVHHFLLTC(UniMod:4)QVLQEHR	4	VVHHFLLTC(UniMod:4)QVLQEHR4	1324.59	8204.89	2720.63
D3ZW15	D3ZW15	D3ZW15_RAT	Sec24b	SEC24 homolog B, COPII coat complex component	1	VVHHLGPATDFYK	VVHHLGPATDFYK	3	VVHHLGPATDFYK3	6588.99	5448.13	4049.94
D3ZW15	D3ZW15	D3ZW15_RAT	Sec24b	SEC24 homolog B, COPII coat complex component	1	VVHHLGPATDFYKK	VVHHLGPATDFYKK	4	VVHHLGPATDFYKK4	553.214	1812.13	
Q9JM53	Q9JM53	AIFM1_RAT	Aifm1	Apoptosis-inducing factor 1, mitochondrial	1	VVHLDVR	VVHLDVR	2	VVHLDVR2	37458.2	25061.1	17722.4
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	VVHLLNDQHLGVVTAATSLITTLAQK	VVHLLNDQHLGVVTAATSLITTLAQK	3	VVHLLNDQHLGVVTAATSLITTLAQK3	2876.7	3380.72	
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	VVHLLNDQHLGVVTAATSLITTLAQK	VVHLLNDQHLGVVTAATSLITTLAQK	4	VVHLLNDQHLGVVTAATSLITTLAQK4	14725.4	14029.3	16610.2
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	VVHLLNDQHMGVVTAAVSLITCLCK	VVHLLNDQHMGVVTAAVSLITC(UniMod:4)LC(UniMod:4)K	4	VVHLLNDQHMGVVTAAVSLITC(UniMod:4)LC(UniMod:4)K4	7929.68		5357.2
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	VVHQNHGER	VVHQNHGER	2	VVHQNHGER2			2454.49
P52873	P52873	PYC_RAT	Pc	Pyruvate carboxylase, mitochondrial	1	VVHSYEELEENYTR	VVHSYEELEENYTR	3	VVHSYEELEENYTR3	5650.24	3480.72	11869.7
Q6P6R2	Q6P6R2;A0A8I6A931	DLDH_RAT	Dld	Dihydrolipoyl dehydrogenase, mitochondrial	0	VVHVNGFGK	VVHVNGFGK	2	VVHVNGFGK2	17971.4	12549.8	17467.9
Q675A5	Q675A5	PAG15_RAT	Pla2g15	Phospholipase A2 group XV	1	VVHYLCSK	VVHYLC(UniMod:4)SK	2	VVHYLC(UniMod:4)SK2	5021.95		
O55004	O55004	RNAS4_RAT	Rnase4	Ribonuclease 4	1	VVIACEGTPEVPVHFDR	VVIAC(UniMod:4)EGTPEVPVHFDR	3	VVIAC(UniMod:4)EGTPEVPVHFDR3			7660.95
Q5U2Z3	Q5U2Z3	NP1L4_RAT	Nap1l4	Nucleosome assembly protein 1-like 4	1	VVIAEKEAAAVEELNPK	VVIAEKEAAAVEELNPK	3	VVIAEKEAAAVEELNPK3	1888.55	1297.09	6593.75
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	VVIARPTPPQAR	VVIARPTPPQAR	3	VVIARPTPPQAR3	139542	43216.4	163642
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	VVICHLPCMNGGQCSSR	VVIC(UniMod:4)HLPC(UniMod:4)MNGGQC(UniMod:4)SSR	3	VVIC(UniMod:4)HLPC(UniMod:4)MNGGQC(UniMod:4)SSR3	83437.1	94039.7	77122
Q4V8E2	Q4V8E2	Q4V8E2_RAT	Psmd14	Proteasome 26S subunit, non-ATPase 14	1	VVIDAFR	VVIDAFR	2	VVIDAFR2	215083	224907	221284
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	VVIEACDELGIVLAHTDLR	VVIEAC(UniMod:4)DELGIVLAHTDLR	3	VVIEAC(UniMod:4)DELGIVLAHTDLR3	16988.4	8093.23	
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	VVIEGQTVDFQCEAK	VVIEGQTVDFQC(UniMod:4)EAK	2	VVIEGQTVDFQC(UniMod:4)EAK2	24781.4	27570.7	16727.9
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	VVIEGQTVDFQCEAK	VVIEGQTVDFQC(UniMod:4)EAK	3	VVIEGQTVDFQC(UniMod:4)EAK3	13172.1		5796.31
P36876	P36876	2ABA_RAT	Ppp2r2a	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	1	VVIFQQEQENK	VVIFQQEQENK	2	VVIFQQEQENK2	68063.3	69299	63152
A0A8I5ZWP3	A0A8I5ZWP3;Q9QYE7	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	0	VVIFTQEAR	VVIFTQEAR	2	VVIFTQEAR2	259678	263672	234887
B0BNI6	B0BNI6	B0BNI6_RAT	Slc25a35	Solute carrier family 25, member 35	1	VVIGSSTQLCTFSSTK	VVIGSSTQLC(UniMod:4)TFSSTK	2	VVIGSSTQLC(UniMod:4)TFSSTK2	3429.2	2289.07	
A0A8I6G8D1	A0A8I6G8D1	A0A8I6G8D1_RAT	Trim56	RING-type E3 ubiquitin transferase	1	VVILDPK	VVILDPK	2	VVILDPK2	8655.35	13295	6022.36
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	VVILNQNDHSPR	VVILNQNDHSPR	3	VVILNQNDHSPR3	22966.9	27283.2	24334.3
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	VVIMDEPTAGVDPASR	VVIMDEPTAGVDPASR	2	VVIMDEPTAGVDPASR2	7223.37	7693.92	15212.8
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	VVIMDEPTAGVDPASRR	VVIMDEPTAGVDPASRR	3	VVIMDEPTAGVDPASRR3	3370.2	8274.54	13150.5
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	VVIMGAGK	VVIMGAGK	2	VVIMGAGK2	1.04858e+06	1.00654e+06	978396
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	VVIMGAGKPAAVVLQTK	VVIMGAGKPAAVVLQTK	2	VVIMGAGKPAAVVLQTK2	20538.6	9067.22	14969.3
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	VVIMGAGKPAAVVLQTK	VVIMGAGKPAAVVLQTK	3	VVIMGAGKPAAVVLQTK3	594336	724223	676388
P30349	P30349	LKHA4_RAT	Lta4h	Leukotriene A-4 hydrolase	1	VVINGQEVK	VVINGQEVK	2	VVINGQEVK2	12933.2	9985.43	
P15384	P63142;P10499;P15384	KCNA3_RAT	Kcna3	Potassium voltage-gated channel subfamily A member 3	0	VVINISGLR	VVINISGLR	2	VVINISGLR2	243387	238808	218339
P19468	P19468	GSH1_RAT	Gclc	Glutamate--cysteine ligase catalytic subunit	1	VVINVPIFK	VVINVPIFK	2	VVINVPIFK2	9706.41	5918.07	9301.22
D4ACX8	D4ACX8	PCD16_RAT	Dchs1	Protocadherin-16	1	VVIQDLGIHGLAPR	VVIQDLGIHGLAPR	3	VVIQDLGIHGLAPR3	34398	28962.4	26688.7
F1M4J1	F1M4J1	F1M4J1_RAT	LOC100294508	Dyslexia susceptibility 2-like	1	VVIQQAK	VVIQQAK	2	VVIQQAK2	6368.21	6817.13	
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	VVIQSNDDIASR	VVIQSNDDIASR	2	VVIQSNDDIASR2	92454	94640.5	72772.3
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	VVITDFGLFGISGVVR	VVITDFGLFGISGVVR	2	VVITDFGLFGISGVVR2	5577.81	11256.3	6115.2
A0A8I6A9A9	A0A8I6A9A9;D3ZWX2	A0A8I6A9A9_RAT	Tmem185b	Transmembrane protein 185B	0	VVITQSPGK	VVITQSPGK	2	VVITQSPGK2	15777.5	10189.4	13525.6
A0A8I6G9C0	A0A8I6G9C0	A0A8I6G9C0_RAT	Rabgap1l	RAB GTPase activating protein 1-like	1	VVITVQQLSNK	VVITVQQLSNK	2	VVITVQQLSNK2	9223.45	15164.3	6540.49
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	VVIVDPETNK	VVIVDPETNK	2	VVIVDPETNK2	20457.4	22516.9	3832.9
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	VVIVNPETK	VVIVNPETK	2	VVIVNPETK2	44790.6	34491.1	35075
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	VVLAAEEVK	VVLAAEEVK	2	VVLAAEEVK2	38718.6	34549.6	27207.1
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	VVLAGGVAPTLFR	VVLAGGVAPTLFR	2	VVLAGGVAPTLFR2	1.02777e+06	948466	948300
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	VVLAGGVAPTLFR	VVLAGGVAPTLFR	3	VVLAGGVAPTLFR3	46665.8	40024.1	52550.1
P48500	A0A0G2JWU1;A0A8I5ZVI4;P48500	TPIS_RAT	Tpi1	Triosephosphate isomerase	0	VVLAYEPVWAIGTGK	VVLAYEPVWAIGTGK	2	VVLAYEPVWAIGTGK2	90826.2	129314	91394.9
P48500	A0A0G2JWU1;A0A8I5ZVI4;P48500	TPIS_RAT	Tpi1	Triosephosphate isomerase	0	VVLAYEPVWAIGTGK	VVLAYEPVWAIGTGK	3	VVLAYEPVWAIGTGK3	27082.1	43685.4	47310.6
Q6AYB4	Q6AYB4	HSP7E_RAT	Hspa14	Heat shock 70 kDa protein 14	1	VVLCGGSSR	VVLC(UniMod:4)GGSSR	2	VVLC(UniMod:4)GGSSR2	14754.9	22146	12492.7
P26772	A0A8I6A3Z7;P26772	CH10_RAT	Hspe1	10 kDa heat shock protein, mitochondrial	0	VVLDDKDYFLFR	VVLDDKDYFLFR	2	VVLDDKDYFLFR2	45295.6	47743.2	41263.2
P26772	A0A8I6A3Z7;P26772	CH10_RAT	Hspe1	10 kDa heat shock protein, mitochondrial	0	VVLDDKDYFLFR	VVLDDKDYFLFR	3	VVLDDKDYFLFR3	711905	761480	858671
P63322	P63322;P36860	RALA_RAT	Rala	Ras-related protein Ral-A	0	VVLDGEEVQIDILDTAGQEDYAAIR	VVLDGEEVQIDILDTAGQEDYAAIR	3	VVLDGEEVQIDILDTAGQEDYAAIR3	14233	8458.16	9139.55
O70467	O70467	ANM3_RAT	Prmt3	Protein arginine N-methyltransferase 3	1	VVLDVGCGTGILSMFAAK	VVLDVGC(UniMod:4)GTGILSMFAAK	2	VVLDVGC(UniMod:4)GTGILSMFAAK2	8079.2		3891.34
Q63009	Q63009;A0A0G2K9I8	ANM1_RAT	Prmt1	Protein arginine N-methyltransferase 1	0	VVLDVGSGTGILCMFAAK	VVLDVGSGTGILC(UniMod:4)MFAAK	2	VVLDVGSGTGILC(UniMod:4)MFAAK2	6832.59	4498.34	
Q63556	Q63556	SPA3M_RAT	Serpina3m	Serine protease inhibitor A3M (Fragment)	1	VVLDVNETGTEAAAATGANLVPR	VVLDVNETGTEAAAATGANLVPR	3	VVLDVNETGTEAAAATGANLVPR3	100017	101557	85104.1
Q02769	Q02769	FDFT_RAT	Fdft1	Squalene synthase	1	VVLEDFPTISLEFR	VVLEDFPTISLEFR	2	VVLEDFPTISLEFR2	12049.9	5522.74	8298.96
A0A0G2K1A2	A0A0G2K1A2	A0A0G2K1A2_RAT	Mpo	Myeloperoxidase	1	VVLEGGIDPILR	VVLEGGIDPILR	2	VVLEGGIDPILR2	43682.2	18725.6	33415.9
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	VVLEGPAPWGFR	VVLEGPAPWGFR	2	VVLEGPAPWGFR2	110555	93031.4	107741
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	VVLEHEEVR	VVLEHEEVR	2	VVLEHEEVR2	9984.65	18345.6	11086.3
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	VVLENEAVR	VVLENEAVR	2	VVLENEAVR2	319477	360610	299240
Q5M890	Q5M890	Q5M890_RAT	Apon	Apolipoprotein N	1	VVLENIGCPAEAYSLQLQLR	VVLENIGC(UniMod:4)PAEAYSLQLQLR	3	VVLENIGC(UniMod:4)PAEAYSLQLQLR3	38263.6	37169.9	39371.2
D3ZTW9	D3ZTW9	D3ZTW9_RAT	Exog	Exo/endonuclease G	1	VVLEQFGFPLTGTETR	VVLEQFGFPLTGTETR	2	VVLEQFGFPLTGTETR2	15554.7	11943.8	15137.4
A0A0G2K089	A0A0G2K089	A0A0G2K089_RAT	Dennd4c	DENN domain containing 4C	1	VVLESPWPSSTR	VVLESPWPSSTR	2	VVLESPWPSSTR2	7043.7	8164.16	7423.25
D3ZLA3	D3ZLA3	D3ZLA3_RAT	Cpne3	Copine 3	1	VVLFEMEAR	VVLFEMEAR	2	VVLFEMEAR2	76365.2	70456.3	80817.2
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	VVLGDQDLK	VVLGDQDLK	2	VVLGDQDLK2	4.07784e+06	3.86199e+06	4.15118e+06
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	VVLGDQDLKK	VVLGDQDLKK	2	VVLGDQDLKK2	888984	796460	671403
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	VVLGTSNFK	VVLGTSNFK	2	VVLGTSNFK2	91467.9	89650.6	90405.2
Q6QMY6	Q6QMY6	TSK_RAT	Tsku	Tsukushi	1	VVLHCGDTQESAR	VVLHC(UniMod:4)GDTQESAR	2	VVLHC(UniMod:4)GDTQESAR2	20481.4	12170.8	15895.1
Q6QMY6	Q6QMY6	TSK_RAT	Tsku	Tsukushi	1	VVLHCGDTQESAR	VVLHC(UniMod:4)GDTQESAR	3	VVLHC(UniMod:4)GDTQESAR3	156838	192371	133199
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	VVLHDGDPNEPVSDYINANIIMPEFETK	VVLHDGDPNEPVSDYINANIIMPEFETK	4	VVLHDGDPNEPVSDYINANIIMPEFETK4	6948.83	11309.2	11313.4
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	VVLHPER	VVLHPER	2	VVLHPER2	394171	270857	252736
O35509	O35509;P62494	RB11B_RAT	Rab11b	Ras-related protein Rab-11B	0	VVLIGDSGVGK	VVLIGDSGVGK	2	VVLIGDSGVGK2	1.63747e+06	1.66288e+06	1.86591e+06
P61980	A0A8I5ZZG4;P61980;M0R9K1	HNRPK_RAT	Hnrnpk	Heterogeneous nuclear ribonucleoprotein K	0	VVLIGGKPDR	VVLIGGKPDR	2	VVLIGGKPDR2	28154.1	14383.7	14422.5
A0A8I5ZKH1	A0A8I5ZKH1	A0A8I5ZKH1_RAT	Ythdc2	RNA helicase	1	VVLIVGETGSGK	VVLIVGETGSGK	2	VVLIVGETGSGK2	26002.1	24037.6	16699.8
B5DFN2	B5DFN2	SAHH2_RAT	Ahcyl1	S-adenosylhomocysteine hydrolase-like protein 1	1	VVLLAEGR	VVLLAEGR	2	VVLLAEGR2	93414.2	87569.2	68523.8
D3ZL10	D3ZL10	D3ZL10_RAT	Col6a6	Collagen type VI alpha 6 chain	1	VVLLFSDGLDDGVEK	VVLLFSDGLDDGVEK	2	VVLLFSDGLDDGVEK2	6805.67	8651.5	5837.94
Q6AXT5	Q6AXT5	RAB21_RAT	Rab21	Ras-related protein Rab-21	1	VVLLGEGCVGK	VVLLGEGC(UniMod:4)VGK	2	VVLLGEGC(UniMod:4)VGK2	138178	144997	255033
Q5XHZ9	Q5XHZ9	PCH2_RAT	Trip13	Pachytene checkpoint protein 2 homolog	1	VVLLHGPPGTGK	VVLLHGPPGTGK	3	VVLLHGPPGTGK3	6004.13	7725	9135.69
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	VVLMPVNAGQPLHASNVELLDNPGCK	VVLMPVNAGQPLHASNVELLDNPGC(UniMod:4)K	3	VVLMPVNAGQPLHASNVELLDNPGC(UniMod:4)K3	36219.2	39442.4	38971.4
A0A8I6GAD6	A0A8I6GAD6	A0A8I6GAD6_RAT	Nrbp1	Nuclear receptor binding protein 1	1	VVLMQCNIESVEEGVK	VVLMQC(UniMod:4)NIESVEEGVK	2	VVLMQC(UniMod:4)NIESVEEGVK2	50218.7	47509.3	44312
A0A8I6GAD6	A0A8I6GAD6	A0A8I6GAD6_RAT	Nrbp1	Nuclear receptor binding protein 1	1	VVLMQCNIESVEEGVK	VVLMQC(UniMod:4)NIESVEEGVK	3	VVLMQC(UniMod:4)NIESVEEGVK3	11886.1	12499.5	9871.36
P53676	P53676	AP3M1_RAT	Ap3m1	AP-3 complex subunit mu-1	1	VVLNMNLTPTQGSYTFDPVTK	VVLNMNLTPTQGSYTFDPVTK	3	VVLNMNLTPTQGSYTFDPVTK3	26022.6	26511.6	28270.9
P00406	P00406	COX2_RAT	Mtco2	Cytochrome c oxidase subunit 2	1	VVLPMELPIR	VVLPMELPIR	2	VVLPMELPIR2	1.01815e+06	854235	1.04823e+06
F1MAQ4	F1MAQ4	F1MAQ4_RAT	Trappc10	Trafficking protein particle complex subunit 10	1	VVLPMHSFAR	VVLPMHSFAR	3	VVLPMHSFAR3	12932.9	10951.5	8639.38
B5DF74	B5DF74;F1LWM8	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	0	VVLPTFILEK	VVLPTFILEK	2	VVLPTFILEK2	23010.3	32616	34461
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	VVLPTFILEPR	VVLPTFILEPR	2	VVLPTFILEPR2	21510.6	17457.8	30320.7
F1LRE5	F1LRE5	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	1	VVLPTFILER	VVLPTFILER	2	VVLPTFILER2	49472.6	51494	58056.8
A0A8I5ZU98	A0A8I5ZU98	A0A8I5ZU98_RAT	Osbpl5	Oxysterol-binding protein	1	VVLPTFVLEPR	VVLPTFVLEPR	2	VVLPTFVLEPR2	9404.63	19325.9	10937.3
A0A8I6AH70	A0A8I6AH70	A0A8I6AH70_RAT	Smtn	Smoothelin	1	VVLPTGNQR	VVLPTGNQR	2	VVLPTGNQR2	234567	151542	207322
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	VVLPTLASLR	VVLPTLASLR	2	VVLPTLASLR2	137253	166592	134816
Q6AY72	Q6AY72	CS025_RAT		UPF0449 protein C19orf25 homolog	1	VVLPTRPAPPTVEQILEDVR	VVLPTRPAPPTVEQILEDVR	3	VVLPTRPAPPTVEQILEDVR3	14455.9	11551.3	
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	VVLQLEK	VVLQLEK	2	VVLQLEK2	304336	265591	288444
F1LSX1	F1LSX1	F1LSX1_RAT	Rskr	Similar to CG14967-PA	1	VVLRPQSSCQSGR	VVLRPQSSC(UniMod:4)QSGR	3	VVLRPQSSC(UniMod:4)QSGR3	40346.4	55712.1	46708.4
A0A0G2K4Y6	A0A0G2K4Y6	A0A0G2K4Y6_RAT	Haus6	Family with sequence similarity 29, member A	1	VVLSDSPQLSEGK	VVLSDSPQLSEGK	2	VVLSDSPQLSEGK2	4308.07	3196.6	2978.76
D3ZZC5	D3ZZC5	D3ZZC5_RAT	Tradd	Tumor necrosis factor receptor type 1-associated DEATH domain protein	1	VVLSEAYTDPK	VVLSEAYTDPK	2	VVLSEAYTDPK2	10298.4	3013.36	4319.41
D3ZZC5	D3ZZC5	D3ZZC5_RAT	Tradd	Tumor necrosis factor receptor type 1-associated DEATH domain protein	1	VVLSEAYTDPKK	VVLSEAYTDPKK	3	VVLSEAYTDPKK3		2682.64	2292.3
D3ZEE4	D3ZEE4	D3ZEE4_RAT	Plxdc1	Plexin domain containing 1	1	VVLSFDFPFYGHPLR	VVLSFDFPFYGHPLR	3	VVLSFDFPFYGHPLR3	25986.6	21819.6	12190.7
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	VVLSQASK	VVLSQASK	2	VVLSQASK2	89550.2	80471.6	70427.7
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	VVLSSQDKDK	VVLSSQDKDK	2	VVLSSQDKDK2	36762.5	51343.5	41966.2
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	VVLVATHADIMNIPR	VVLVATHADIMNIPR	3	VVLVATHADIMNIPR3	14613.4	11618.1	5407.68
P14046	A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	VVLVKNK	VVLVKNK	2	VVLVKNK2	8277.65	3262.8	
P61354	A0A8I5ZSW2;D3ZTK5;P61354;M0R7P0	RL27_RAT	Rpl27	Large ribosomal subunit protein eL27	0	VVLVLAGR	VVLVLAGR	2	VVLVLAGR2	72848	80748.6	73033.4
P60192	P60192	SNAPN_RAT	Snapin	SNARE-associated protein Snapin	1	VVLVNNILQNAQER	VVLVNNILQNAQER	2	VVLVNNILQNAQER2	30433.4	24339.7	23700.1
P60192	P60192	SNAPN_RAT	Snapin	SNARE-associated protein Snapin	1	VVLVNNILQNAQER	VVLVNNILQNAQER	3	VVLVNNILQNAQER3	10549.4	10232.1	4775.5
P97852	P97852	DHB4_RAT	Hsd17b4	Peroxisomal multifunctional enzyme type 2	1	VVLVTGAGGGLGR	VVLVTGAGGGLGR	2	VVLVTGAGGGLGR2	63902.2	81450	78998.8
A0A8I6AEI3	A0A8I6AEI3	A0A8I6AEI3_RAT	Wwox	WW domain-containing oxidoreductase	1	VVLVTGANSGIGFETAK	VVLVTGANSGIGFETAK	2	VVLVTGANSGIGFETAK2	5936.12	1304.28	2351.08
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	VVLWGSDYSK	VVLWGSDYSK	2	VVLWGSDYSK2	103630	85567.6	99790.4
D3ZG57	D3ZG57	D3ZG57_RAT	Tor4a	Torsin family 4, member A	1	VVLYPETSR	VVLYPETSR	2	VVLYPETSR2	98963.8	100036	107808
D3ZG57	D3ZG57	D3ZG57_RAT	Tor4a	Torsin family 4, member A	1	VVLYPETSRK	VVLYPETSRK	3	VVLYPETSRK3		11902.4	6724.46
Q5M965	Q5M965	THG1_RAT	Thg1l	Probable tRNA(His) guanylyltransferase	1	VVLYPSNQTLK	VVLYPSNQTLK	2	VVLYPSNQTLK2	7509.08		5011.39
Q6P3V8	Q6P3V8	Q6P3V8_RAT	Eif4a1	ATP-dependent RNA helicase	1	VVMALGDYMGASCHACIGGTNVR	VVMALGDYMGASC(UniMod:4)HAC(UniMod:4)IGGTNVR	3	VVMALGDYMGASC(UniMod:4)HAC(UniMod:4)IGGTNVR3	47646.6	23033.1	27321.9
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	VVMAPHEPLVVFVDNYIK	VVMAPHEPLVVFVDNYIK	3	VVMAPHEPLVVFVDNYIK3	16777.7	18355.7	17021.8
P85973	P85973	PNPH_RAT	Pnp	Purine nucleoside phosphorylase	1	VVMDYNNLEK	VVMDYNNLEK	2	VVMDYNNLEK2	167290	153384	147044
M0R8V0	M0R8V0	M0R8V0_RAT	Bltp3b	UHRF1 binding protein 1-like	1	VVMEMSTCEEPR	VVMEMSTC(UniMod:4)EEPR	2	VVMEMSTC(UniMod:4)EEPR2	10525.9	11215.8	14434.9
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	VVMEQQLK	VVMEQQLK	2	VVMEQQLK2	131006	167578	186603
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	VVMITGDNK	VVMITGDNK	2	VVMITGDNK2	2.64946e+06	2.56427e+06	2.24714e+06
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	VVMITGDNPLTACHVAQELHFIDK	VVMITGDNPLTAC(UniMod:4)HVAQELHFIDK	4	VVMITGDNPLTAC(UniMod:4)HVAQELHFIDK4	12964.1	13757.1	10194.6
O70367	O70367	CNMD_RAT	Cnmd	Leukocyte cell-derived chemotaxin 1	1	VVMPCSWWVAR	VVMPC(UniMod:4)SWWVAR	2	VVMPC(UniMod:4)SWWVAR2	14255.1	11603.4	12536.8
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	VVMYEGK	VVMYEGK	1	VVMYEGK1	219724	177726	164110
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	VVMYEGK	VVMYEGK	2	VVMYEGK2	3.39156e+07	3.56004e+07	3.34822e+07
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	VVMYEGKK	VVMYEGKK	1	VVMYEGKK1	752.769	1814.96	4539.29
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	VVMYEGKK	VVMYEGKK	2	VVMYEGKK2	2.03078e+06	2.25509e+06	2.4093e+06
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	VVNADISCQYK	VVNADISC(UniMod:4)QYK	2	VVNADISC(UniMod:4)QYK2	87367.8	76838	70744.5
A0A8I6A6W3	A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	1	VVNAMGK	VVNAMGK	1	VVNAMGK1		7134.78	
P56522	P56522	ADRO_RAT	Fdxr	NADPH:adrenodoxin oxidoreductase, mitochondrial	1	VVNAPGLYCSGWVK	VVNAPGLYC(UniMod:4)SGWVK	2	VVNAPGLYC(UniMod:4)SGWVK2	16280.1	13698.7	18448.9
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	VVNAPIFHVNSDDPEAVMYVCK	VVNAPIFHVNSDDPEAVMYVC(UniMod:4)K	3	VVNAPIFHVNSDDPEAVMYVC(UniMod:4)K3	62827	63774.7	61856.7
Q5XHZ9	Q5XHZ9	PCH2_RAT	Trip13	Pachytene checkpoint protein 2 homolog	1	VVNAVLTQIDQIK	VVNAVLTQIDQIK	2	VVNAVLTQIDQIK2	7391.2	4121.35	6261.15
Q5XHZ9	Q5XHZ9	PCH2_RAT	Trip13	Pachytene checkpoint protein 2 homolog	1	VVNAVLTQIDQIKR	VVNAVLTQIDQIKR	3	VVNAVLTQIDQIKR3	4903.15	3351.61	8594.49
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	VVNEECPTITR	VVNEEC(UniMod:4)PTITR	2	VVNEEC(UniMod:4)PTITR2	5117.68	4968.31	2701.75
D4A2N2	D4A2N2	D4A2N2_RAT	Inpp5b	phosphoinositide 5-phosphatase	1	VVNEELYR	VVNEELYR	2	VVNEELYR2	29599.3	28286.9	24497.9
D4AAE9	D4AAE9	D4AAE9_RAT	Cisd2	CDGSH iron-sulfur domain-containing protein 2	1	VVNEINIEDLNLTK	VVNEINIEDLNLTK	2	VVNEINIEDLNLTK2	174391	182812	182982
D4AAE9	D4AAE9	D4AAE9_RAT	Cisd2	CDGSH iron-sulfur domain-containing protein 2	1	VVNEINIEDLNLTK	VVNEINIEDLNLTK	3	VVNEINIEDLNLTK3	20964.2	21827.2	24188.5
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	VVNGPEILNK	VVNGPEILNK	2	VVNGPEILNK2	54811.3	54546.6	48946.1
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	VVNGQVFTLDDEPCTR	VVNGQVFTLDDEPC(UniMod:4)TR	2	VVNGQVFTLDDEPC(UniMod:4)TR2	79939.5	81892.9	77608.2
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	VVNGQVFTLDDEPCTR	VVNGQVFTLDDEPC(UniMod:4)TR	3	VVNGQVFTLDDEPC(UniMod:4)TR3	30792.9	33101.8	35496.5
P29147	P29147	BDH_RAT	Bdh1	D-beta-hydroxybutyrate dehydrogenase, mitochondrial	1	VVNISSMLGR	VVNISSMLGR	2	VVNISSMLGR2	36868.4	31644.3	48388.6
Q9QZR6	Q9QZR6	SEPT9_RAT	Septin9	Septin-9	1	VVNIVPVIAK	VVNIVPVIAK	2	VVNIVPVIAK2	8496.32	9653.27	10701.8
Q0ZFS4	Q0ZFS4	Q0ZFS4_RAT	Mrps33	Mitochondrial ribosomal protein S33	1	VVNLFSEQPLAK	VVNLFSEQPLAK	2	VVNLFSEQPLAK2	2212.56		2153.57
F1LVL5	F1LVL5;Q7TP36;F1LP26	F1LVL5_RAT	Shroom4	Shroom family member 4	0	VVNLLLSLSGR	VVNLLLSLSGR	2	VVNLLLSLSGR2	6632.33	7724.24	5324.35
D3ZZA8	D3ZZA8	D3ZZA8_RAT	Sec24a	SEC24 homolog A, COPII coat complex component	1	VVNLLQER	VVNLLQER	2	VVNLLQER2	14968.1	11649.4	5522.93
Q9WTQ2	Q9WTQ2	PODXL_RAT	Podxl	Podocalyxin	1	VVNLNGELGDSWIVPLDNLTK	VVNLNGELGDSWIVPLDNLTK	3	VVNLNGELGDSWIVPLDNLTK3	75801.9	60970.7	66056.2
D4A4Q3	D4A4Q3	D4A4Q3_RAT	Ypel5	Protein yippee-like	1	VVNLQYSEVQDR	VVNLQYSEVQDR	2	VVNLQYSEVQDR2	7487.99	4231.6	1641.66
P62425	F1M1M2;P62425;F1M4C7;A0A8I6AUG1;M0R3M3;D3ZU22;D4A8X2;D3ZJH5;A0A8I6AMN7;D3ZPL5;F1M2Q3;D4A6B9	RL7A_RAT	Rpl7a	Large ribosomal subunit protein eL8	0	VVNPLFEK	VVNPLFEK	2	VVNPLFEK2	16603.3	12759	13158.8
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	VVNPTVL	VVNPTVL	1	VVNPTVL1	1.17199e+07	1.16616e+07	1.22825e+07
P54645	P54645	AAPK1_RAT	Prkaa1	5'-AMP-activated protein kinase catalytic subunit alpha-1	1	VVNPYYLR	VVNPYYLR	2	VVNPYYLR2	72807.1	75693.3	75670.7
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	VVNRADTVQEATFQVELPR	VVNRADTVQEATFQVELPR	3	VVNRADTVQEATFQVELPR3			1868.13
P97615	P97615	THIOM_RAT	Txn2	Thioredoxin, mitochondrial	1	VVNSETPVVVDFHAQWCGPCK	VVNSETPVVVDFHAQWC(UniMod:4)GPC(UniMod:4)K	3	VVNSETPVVVDFHAQWC(UniMod:4)GPC(UniMod:4)K3	23742.8	30048.3	28705
D4A3I5	D4A3I5	D4A3I5_RAT	Fhip2a	FHF complex subunit HOOK interacting protein 2A	1	VVNSFLCLVPDEAK	VVNSFLC(UniMod:4)LVPDEAK	2	VVNSFLC(UniMod:4)LVPDEAK2	36847.2	29312.9	28331.5
Q6AYS7	Q6AYS7	ACY1A_RAT	Acy1a	Aminoacylase-1A	1	VVNSILAFR	VVNSILAFR	2	VVNSILAFR2	6977.78	4990.45	3180.22
A0A0G2JV24	A0A0G2JV24	A0A0G2JV24_RAT	Thbs1	Thrombospondin 1	1	VVNSTTGPGEHLR	VVNSTTGPGEHLR	3	VVNSTTGPGEHLR3	40443.8	84686.7	46898.4
D4A0Z1	D4A0Z1	D4A0Z1_RAT	Tspan14	Tetraspanin	1	VVNTQCGYDVR	VVNTQC(UniMod:4)GYDVR	2	VVNTQC(UniMod:4)GYDVR2	95930	97281.8	94208.8
D4AEL8	D4AEL8	D4AEL8_RAT	Cep131	Centrosomal protein 131	1	VVNTQMCSER	VVNTQMC(UniMod:4)SER	2	VVNTQMC(UniMod:4)SER2	3110.98	2516.64	
D3ZQL1	D3ZQL1	D3ZQL1_RAT	Emc7	ER membrane protein complex subunit 7	1	VVNTSDPDMR	VVNTSDPDMR	2	VVNTSDPDMR2	18410.1	14202.8	14738.5
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	VVNVANLGAVPSSQDNIHR	VVNVANLGAVPSSQDNIHR	3	VVNVANLGAVPSSQDNIHR3	228060	341059	247202
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	VVNVELPVEANLVWQLGR	VVNVELPVEANLVWQLGR	3	VVNVELPVEANLVWQLGR3	23407.8	21194.9	24128.9
Q6TUD3	Q6TUD3	Q6TUD3_RAT	Rdh11	LRRGT00111	1	VVNVSSLAHHLGR	VVNVSSLAHHLGR	3	VVNVSSLAHHLGR3	62522.3	51867.2	39889.3
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	VVNYLPR	VVNYLPR	2	VVNYLPR2	68097.1	72933.6	57605.1
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	VVPALITLSSDPEISVR	VVPALITLSSDPEISVR	2	VVPALITLSSDPEISVR2	26553	27787.4	2048.42
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	VVPCLVAPVAGR	VVPC(UniMod:4)LVAPVAGR	2	VVPC(UniMod:4)LVAPVAGR2	26812.2	24721.7	28570.5
Q9QZA6	Q9QZA6	CD151_RAT	Cd151	CD151 antigen	1	VVPDSCCK	VVPDSC(UniMod:4)C(UniMod:4)K	1	VVPDSC(UniMod:4)C(UniMod:4)K1	21051.8		31539.4
Q9QZA6	Q9QZA6	CD151_RAT	Cd151	CD151 antigen	1	VVPDSCCK	VVPDSC(UniMod:4)C(UniMod:4)K	2	VVPDSC(UniMod:4)C(UniMod:4)K2	1.63441e+06	1.554e+06	1.81686e+06
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	VVPEDVK	VVPEDVK	2	VVPEDVK2	245877	206113	254460
F1M0F6	F1M0F6	F1M0F6_RAT	Cass4	Cas scaffold protein family member 4	1	VVPEDVKR	VVPEDVKR	2	VVPEDVKR2	101767	125833	88469.4
P08650	P08650	CO5_RAT	C5	Complement C5	1	VVPEGIKR	VVPEGIKR	2	VVPEGIKR2	115402	83026.2	44533.4
P01026	P01026	CO3_RAT	C3	Complement C3	1	VVPEGMR	VVPEGMR	2	VVPEGMR2	3.25276e+06	3.62514e+06	3.37942e+06
D4A7V9	D4A7V9	E2AK4_RAT	Eif2ak4	eIF-2-alpha kinase GCN2	1	VVPEILAAGGR	VVPEILAAGGR	2	VVPEILAAGGR2		16594.4	4737.86
P13803	P13803	ETFA_RAT	Etfa	Electron transfer flavoprotein subunit alpha, mitochondrial	1	VVPEMTEILK	VVPEMTEILK	2	VVPEMTEILK2	338111	310610	326893
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	VVPESQCQTETKPLAIHPCGDK	VVPESQC(UniMod:4)QTETKPLAIHPC(UniMod:4)GDK	3	VVPESQC(UniMod:4)QTETKPLAIHPC(UniMod:4)GDK3	50570	62368.8	49367.4
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	VVPESQCQTETKPLAIHPCGDK	VVPESQC(UniMod:4)QTETKPLAIHPC(UniMod:4)GDK	4	VVPESQC(UniMod:4)QTETKPLAIHPC(UniMod:4)GDK4	158860	143159	146656
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	VVPFISAIASAEVK	VVPFISAIASAEVK	2	VVPFISAIASAEVK2	546927	600060	608425
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	VVPFISAIASAEVK	VVPFISAIASAEVK	3	VVPFISAIASAEVK3	40586.1	42765.8	51444.8
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	VVPFISAIASAEVKR	VVPFISAIASAEVKR	3	VVPFISAIASAEVKR3	27508.9	28672.1	52998.5
Q8VHF5	Q8VHF5	CISY_RAT	Cs	Citrate synthase, mitochondrial	1	VVPGYGHAVLR	VVPGYGHAVLR	2	VVPGYGHAVLR2	25218.3	25672.5	38477.5
Q8VHF5	Q8VHF5	CISY_RAT	Cs	Citrate synthase, mitochondrial	1	VVPGYGHAVLR	VVPGYGHAVLR	3	VVPGYGHAVLR3	512362	710755	1.19859e+06
Q7TP21	Q7TP21	Q7TP21_RAT	Rpa1	Replication protein A subunit	1	VVPIASLTPYQSK	VVPIASLTPYQSK	2	VVPIASLTPYQSK2	6364.25	8640.62	9869.71
Q5XFW6	Q5XFW6	WDR6_RAT	Wdr6	WD repeat-containing protein 6	1	VVPINTPTAAVDQNLFQGK	VVPINTPTAAVDQNLFQGK	3	VVPINTPTAAVDQNLFQGK3	8212.47	7827.12	4987.84
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	VVPLKENVK	VVPLKENVK	2	VVPLKENVK2	12138.9	12712	10157.1
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	VVPMLPR	VVPMLPR	2	VVPMLPR2	86981.1	89916.6	64053.7
D3ZW34	D3ZW34	D3ZW34_RAT	Adamdec1	ADAM-like, decysin 1	1	VVPNLGATFTNFMR	VVPNLGATFTNFMR	2	VVPNLGATFTNFMR2	5411.29	10405.5	
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	VVPQAVLDLLTWQELEK	VVPQAVLDLLTWQELEK	3	VVPQAVLDLLTWQELEK3	5169.55	5705.35	9388
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	VVPQAVLDLLTWQELEKK	VVPQAVLDLLTWQELEKK	3	VVPQAVLDLLTWQELEKK3	10518.3	7851.85	4441.61
D3ZGW2	D3ZGW2	D3ZGW2_RAT	Ap1g2	AP-1 complex subunit gamma	1	VVPQLVQILR	VVPQLVQILR	2	VVPQLVQILR2	13951.9	11097.6	11478.7
F7EXX5	F7EXX5	F7EXX5_RAT	Irf3	Interferon regulatory factor 3	1	VVPTCLK	VVPTC(UniMod:4)LK	2	VVPTC(UniMod:4)LK2	22856.8		29439.7
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	VVPTDGGR	VVPTDGGR	2	VVPTDGGR2	78462.2	55763.1	99970.6
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	VVPTPNNGSTELVALHR	VVPTPNNGSTELVALHR	3	VVPTPNNGSTELVALHR3	15779	24921.5	10241.4
A2VCX1	A2VCX1	TIPRL_RAT	Tiprl	TIP41-like protein	1	VVPTTDHIDTEK	VVPTTDHIDTEK	3	VVPTTDHIDTEK3	30866.8	37492.7	21779.3
D3ZU83	D3ZU83	D3ZU83_RAT	Ergic3	Endoplasmic reticulum-Golgi intermediate compartment protein	1	VVPTVYMK	VVPTVYMK	2	VVPTVYMK2	54879.6	41342.3	52733.7
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	VVPVNGQELTTTITALDAGR	VVPVNGQELTTTITALDAGR	3	VVPVNGQELTTTITALDAGR3	3736.74	7623.28	3997.23
B2RYM1	B2RYM1	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	1	VVPVWCEQQQEGGGWTVIQR	VVPVWC(UniMod:4)EQQQEGGGWTVIQR	3	VVPVWC(UniMod:4)EQQQEGGGWTVIQR3	68340.4	64074.8	74612
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	VVPYFTQTPYSFLPLPTIK	VVPYFTQTPYSFLPLPTIK	3	VVPYFTQTPYSFLPLPTIK3		5231.11	4489.35
Q01129	Q01129	PGS2_RAT	Dcn	Decorin	1	VVQCSDLGLDK	VVQC(UniMod:4)SDLGLDK	2	VVQC(UniMod:4)SDLGLDK2	1943.21		
P47853	P47853	PGS1_RAT	Bgn	Biglycan	1	VVQCSDLGLK	VVQC(UniMod:4)SDLGLK	2	VVQC(UniMod:4)SDLGLK2	92884.4	119494	40962.9
Q5FVM5	Q5FVM5	CR3L3_RAT	Creb3l3	Cyclic AMP-responsive element-binding protein 3-like protein 3	1	VVQDALGVL	VVQDALGVL	1	VVQDALGVL1	73563.9	65124.7	95527.1
Q5FVM5	Q5FVM5	CR3L3_RAT	Creb3l3	Cyclic AMP-responsive element-binding protein 3-like protein 3	1	VVQDALGVL	VVQDALGVL	2	VVQDALGVL2	60198.5	55832.1	89069.5
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	VVQDCASAVCTTGWLADGTLGTTVCSK	VVQDC(UniMod:4)ASAVC(UniMod:4)TTGWLADGTLGTTVC(UniMod:4)SK	3	VVQDC(UniMod:4)ASAVC(UniMod:4)TTGWLADGTLGTTVC(UniMod:4)SK3	3853.3	4985.4	
P13803	P13803	ETFA_RAT	Etfa	Electron transfer flavoprotein subunit alpha, mitochondrial	1	VVQDLCK	VVQDLC(UniMod:4)K	2	VVQDLC(UniMod:4)K2	210493	187034	198832
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	VVQDLSGEHMGAVWTMK	VVQDLSGEHMGAVWTMK	2	VVQDLSGEHMGAVWTMK2	4119.79	1788.66	1876.56
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	VVQDLSGEHMGAVWTMK	VVQDLSGEHMGAVWTMK	3	VVQDLSGEHMGAVWTMK3	179202	229787	189663
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	VVQDTYQIMK	VVQDTYQIMK	2	VVQDTYQIMK2	27306.9	21737.8	21083.4
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	VVQEFGLHNENLDQR	VVQEFGLHNENLDQR	3	VVQEFGLHNENLDQR3	18673.5	23693.9	17470.2
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	VVQEQGTHPK	VVQEQGTHPK	2	VVQEQGTHPK2			266425
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	VVQEYIDAFSDYANFK	VVQEYIDAFSDYANFK	2	VVQEYIDAFSDYANFK2	5925.87	6589.37	4807.08
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	VVQEYIDAFSDYANFK	VVQEYIDAFSDYANFK	3	VVQEYIDAFSDYANFK3	4246.56		
Q5U300	Q5U300	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	1	VVQGHQQLDSYK	VVQGHQQLDSYK	3	VVQGHQQLDSYK3	14215.1	14812.7	15904.2
Q5XIE1	Q5XIE1	THEM6_RAT	Them6	Protein THEM6	1	VVQHLCK	VVQHLC(UniMod:4)K	2	VVQHLC(UniMod:4)K2			5292.79
A0A0G2K7U7	A0A0G2K7U7	A0A0G2K7U7_RAT	Ankrd27	Ankyrin repeat domain 27	1	VVQLMTQSPSQR	VVQLMTQSPSQR	2	VVQLMTQSPSQR2	3865.39	7396.89	5590.75
F1M3J4	F1M3J4	MRP4_RAT	Abcc4	ATP-binding cassette subfamily C member 4	1	VVQPIFLGK	VVQPIFLGK	2	VVQPIFLGK2	54452.8	41348.3	43337.8
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	VVQQSVLEVDER	VVQQSVLEVDER	2	VVQQSVLEVDER2	783955	841283	745171
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	VVQQSVLEVDER	VVQQSVLEVDER	3	VVQQSVLEVDER3	1.22917e+06	1.19585e+06	1.28571e+06
D3ZY54	D3ZY54	D3ZY54_RAT	Slc30a5	Zinc transporter	1	VVQQVTGILK	VVQQVTGILK	2	VVQQVTGILK2	11184.1	6495.18	7352.16
E9PT79	E9PT79	E9PT79_RAT	Tsn	Translin	1	VVQSLEQTAR	VVQSLEQTAR	2	VVQSLEQTAR2	12193.6	9068.4	9891.96
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	VVQSLITAK	VVQSLITAK	2	VVQSLITAK2	15402.2	8286.65	8765.71
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	VVQSMTQLVR	VVQSMTQLVR	2	VVQSMTQLVR2	745250	826415	820418
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	VVQTDETAR	VVQTDETAR	2	VVQTDETAR2	178563		88932.4
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	VVQVPGYEDQVTISGLEPDHK	VVQVPGYEDQVTISGLEPDHK	3	VVQVPGYEDQVTISGLEPDHK3	118134	130685	117984
A0A8I6A554	A0A8I6A554	A0A8I6A554_RAT	AC132020.1	28S ribosomal protein S36, mitochondrial	1	VVQVVKPHAPLIK	VVQVVKPHAPLIK	3	VVQVVKPHAPLIK3	20507.9	16314.3	10996.7
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	VVRPDSELGER	VVRPDSELGER	3	VVRPDSELGER3	24914.2	2069.08	
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	VVRPDSELGERPPEDNQSFQYDHEAFLGK	VVRPDSELGERPPEDNQSFQYDHEAFLGK	4	VVRPDSELGERPPEDNQSFQYDHEAFLGK4	6216.67		
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	VVSAAVQAQHSK	VVSAAVQAQHSK	2	VVSAAVQAQHSK2	26102.8	13551.4	15350.8
Q5U1Z0	Q5U1Z0	RBGPR_RAT	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit	1	VVSAAVQAQHSK	VVSAAVQAQHSK	3	VVSAAVQAQHSK3	93449.2	101463	105162
Q63942	Q63942	RAB3D_RAT	Rab3d	GTP-binding protein Rab-3D	1	VVSAEDGQR	VVSAEDGQR	2	VVSAEDGQR2			454386
A0A8I6AMS6	A0A8I6AMS6	A0A8I6AMS6_RAT	Rangap1	RAN GTPase activating protein 1	1	VVSAFLK	VVSAFLK	2	VVSAFLK2	22360.2	18405.4	16127.6
P20761	P20761	IGG2B_RAT	Igh-1a	Ig gamma-2B chain C region	1	VVSALPIQHQDWMSGK	VVSALPIQHQDWMSGK	2	VVSALPIQHQDWMSGK2	415484	357422	392235
P20761	P20761	IGG2B_RAT	Igh-1a	Ig gamma-2B chain C region	1	VVSALPIQHQDWMSGK	VVSALPIQHQDWMSGK	3	VVSALPIQHQDWMSGK3	9.52438e+06	9.59426e+06	9.16073e+06
P20761	P20761	IGG2B_RAT	Igh-1a	Ig gamma-2B chain C region	1	VVSALPIQHQDWMSGKEFK	VVSALPIQHQDWMSGKEFK	4	VVSALPIQHQDWMSGKEFK4	19548.1	15335.6	15873.7
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	VVSAQIR	VVSAQIR	2	VVSAQIR2	448661	409443	422927
G3V762	G3V762	G3V762_RAT	Gfus	GDP-L-fucose synthase	1	VVSCLSTCIFPDK	VVSC(UniMod:4)LSTC(UniMod:4)IFPDK	2	VVSC(UniMod:4)LSTC(UniMod:4)IFPDK2	13757	8196.88	10676.6
Q80Z30	Q80Z30	PPM1E_RAT	Ppm1e	Protein phosphatase 1E	1	VVSDHLK	VVSDHLK	2	VVSDHLK2	161459		142531
Q80Z30	Q80Z30	PPM1E_RAT	Ppm1e	Protein phosphatase 1E	1	VVSDHLKENNGDSSMVAHK	VVSDHLKENNGDSSMVAHK	4	VVSDHLKENNGDSSMVAHK4		1214.58	3120
Q6BBI8	Q6BBI8	UFC1_RAT	Ufc1	Ubiquitin-fold modifier-conjugating enzyme 1	1	VVSEIPVLK	VVSEIPVLK	2	VVSEIPVLK2	33330.3	28216.2	41831.9
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	VVSGEQSTEGSFSLR	VVSGEQSTEGSFSLR	2	VVSGEQSTEGSFSLR2	32274	43513.4	41450.4
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	VVSGEQSTEGSFSLR	VVSGEQSTEGSFSLR	3	VVSGEQSTEGSFSLR3	2355.6	2499.98	3368.72
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	VVSGFVFLR	VVSGFVFLR	2	VVSGFVFLR2	16966	13492.5	17380.9
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	VVSGMVNCNDDQGVLLGR	VVSGMVNC(UniMod:4)NDDQGVLLGR	2	VVSGMVNC(UniMod:4)NDDQGVLLGR2	16327.4	7984.25	9912.04
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	VVSGMVNCNDDQGVLLGR	VVSGMVNC(UniMod:4)NDDQGVLLGR	3	VVSGMVNC(UniMod:4)NDDQGVLLGR3	16118.1	15572.6	15893.1
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	VVSGPRPLGTFR	VVSGPRPLGTFR	3	VVSGPRPLGTFR3	115256	142667	111263
P58405	P58405	STRN3_RAT	Strn3	Striatin-3	1	VVSHPTLPVTITAHEDR	VVSHPTLPVTITAHEDR	3	VVSHPTLPVTITAHEDR3	8755.7	7799.29	13788.8
P58405	P58405	STRN3_RAT	Strn3	Striatin-3	1	VVSHPTLPVTITAHEDR	VVSHPTLPVTITAHEDR	4	VVSHPTLPVTITAHEDR4	60593.3	49348.1	61569.7
Q64686	Q64686	SIA7C_RAT	St6galnac3	Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	1	VVSHTSVPLLLK	VVSHTSVPLLLK	3	VVSHTSVPLLLK3	3435.27	8392.56	4128.1
D4A3T4	D4A3T4	D4A3T4_RAT	Zfyve1	Zinc finger FYVE-type containing 1	1	VVSIFGNTGDGK	VVSIFGNTGDGK	2	VVSIFGNTGDGK2	10361	6300.2	8078.39
A0A8I5ZQE4	A0A8I5ZQE4	A0A8I5ZQE4_RAT	Supt5h	Transcription elongation factor SPT5	1	VVSISSEHLEPITPTK	VVSISSEHLEPITPTK	3	VVSISSEHLEPITPTK3	11374.7	12092.7	13257.1
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	VVSIYGSSIDVELQQR	VVSIYGSSIDVELQQR	2	VVSIYGSSIDVELQQR2	20384.3	15432.1	13367.5
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	VVSLDESFHPLNELIPLLYIQDPK	VVSLDESFHPLNELIPLLYIQDPK	3	VVSLDESFHPLNELIPLLYIQDPK3	4277.16	6001.87	
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	VVSMDKNLHPLNELFPLAYIEDPK	VVSMDKNLHPLNELFPLAYIEDPK	3	VVSMDKNLHPLNELFPLAYIEDPK3	107303	70241.3	70140.2
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	VVSMDKNLHPLNELFPLAYIEDPK	VVSMDKNLHPLNELFPLAYIEDPK	4	VVSMDKNLHPLNELFPLAYIEDPK4	395139	353636	366495
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	VVSMDKNLHPLNELFPLAYIEDPKMNR	VVSMDKNLHPLNELFPLAYIEDPKMNR	4	VVSMDKNLHPLNELFPLAYIEDPKMNR4	94153.7	92851.7	114384
Q5PQX0	Q5PQX0	UXS1_RAT	Uxs1	UDP-glucuronic acid decarboxylase 1	1	VVSNFILQALQGEPLTVYGSGSQTR	VVSNFILQALQGEPLTVYGSGSQTR	3	VVSNFILQALQGEPLTVYGSGSQTR3	13865.5	13090.4	13286.7
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	VVSNFMDFDENGVLK	VVSNFMDFDENGVLK	2	VVSNFMDFDENGVLK2	60408.3	68621.4	69659.9
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	VVSNFMDFDENGVLK	VVSNFMDFDENGVLK	3	VVSNFMDFDENGVLK3	8359.59	1689.57	7959.24
A0A0G2K8I5	A0A0G2K8I5	A0A0G2K8I5_RAT	Pcdh19	Protocadherin 19	1	VVSNSAPHLVDINPSSGLLVTK	VVSNSAPHLVDINPSSGLLVTK	3	VVSNSAPHLVDINPSSGLLVTK3	16691.3	21149.9	13244.8
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	VVSNTIEPLTLFHK	VVSNTIEPLTLFHK	3	VVSNTIEPLTLFHK3	4988.79	5559.87	7553.04
Q5I0K5	Q5I0K5	ABHDA_RAT	Abhd10	Palmitoyl-protein thioesterase ABHD10, mitochondrial	1	VVSPDVDVILR	VVSPDVDVILR	2	VVSPDVDVILR2	2417.89	706.148	
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	VVSPIIDVINMDNFQYVGASADLK	VVSPIIDVINMDNFQYVGASADLK	3	VVSPIIDVINMDNFQYVGASADLK3	58599.8	40769.4	72512.3
Q8R4Z9	Q8R4Z9	MFN1_RAT	Mfn1	Mitofusin-1	1	VVSPLEAR	VVSPLEAR	2	VVSPLEAR2	11781.4		8914.56
D4A3A9	D4A3A9	D4A3A9_RAT	Galnt15	Polypeptide N-acetylgalactosaminyltransferase	1	VVSPVIDVIDWK	VVSPVIDVIDWK	2	VVSPVIDVIDWK2	5036.09	3940.79	3999.14
P49432	P49432	ODPB_RAT	Pdhb	Pyruvate dehydrogenase E1 component subunit beta, mitochondrial	1	VVSPWNSEDAK	VVSPWNSEDAK	2	VVSPWNSEDAK2	138508	145541	143404
F1M8V2	F1M8V2	F1M8V2_RAT	Ube4b	Ubiquitin conjugation factor E4	1	VVSQSLQHYLELGR	VVSQSLQHYLELGR	3	VVSQSLQHYLELGR3	22122.6	13390.6	10684.1
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	VVSQYHELVVQAR	VVSQYHELVVQAR	2	VVSQYHELVVQAR2	4664.52	2624.15	
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	VVSQYHELVVQAR	VVSQYHELVVQAR	3	VVSQYHELVVQAR3	266702	264039	274489
Q7TPB1	Q7TPB1	TCPD_RAT	Cct4	T-complex protein 1 subunit delta	1	VVSQYSSLLSPMSVNAVMK	VVSQYSSLLSPMSVNAVMK	3	VVSQYSSLLSPMSVNAVMK3	96605	79937.6	153105
Q63055	Q63055	ARFRP_RAT	Arfrp1	ADP-ribosylation factor-related protein 1	1	VVSSEALDGVPILVLANK	VVSSEALDGVPILVLANK	2	VVSSEALDGVPILVLANK2	10395.6	7609.89	5213.7
Q63055	Q63055	ARFRP_RAT	Arfrp1	ADP-ribosylation factor-related protein 1	1	VVSSEALDGVPILVLANK	VVSSEALDGVPILVLANK	3	VVSSEALDGVPILVLANK3	3512.94	5657.47	5154.32
P63102	P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	1	VVSSIEQK	VVSSIEQK	1	VVSSIEQK1	93350.2	93598	81653.9
P63102	P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	1	VVSSIEQK	VVSSIEQK	2	VVSSIEQK2	50270	2.15897e+07	2.49228e+07
P63102	P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	1	VVSSIEQKTEGAEK	VVSSIEQKTEGAEK	3	VVSSIEQKTEGAEK3	12104.4	16283.5	22154.9
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	VVSSSIVDK	VVSSSIVDK	2	VVSSSIVDK2	305290	282876	307591
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	VVSSSIVDKYIGESAR	VVSSSIVDKYIGESAR	3	VVSSSIVDKYIGESAR3	9872.31	26474.8	26086.7
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	VVSSTSEEEEAFTEK	VVSSTSEEEEAFTEK	2	VVSSTSEEEEAFTEK2	15683.1	26740.8	19627.2
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	VVSSTSEEEEAFTEK	VVSSTSEEEEAFTEK	3	VVSSTSEEEEAFTEK3	4746.26		7245.78
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	VVSSVNVR	VVSSVNVR	2	VVSSVNVR2	46230.3	50506.2	63031.7
Q6IFV1	Q6IFV1	K1C14_RAT	Krt14	Keratin, type I cytoskeletal 14	1	VVSTHEQVLR	VVSTHEQVLR	3	VVSTHEQVLR3	14553	17412.4	27176.3
A0A8I5Y9E9	A0A8I5Y9E9	A0A8I5Y9E9_RAT	Trem2	Triggering receptor expressed on myeloid cells 2	1	VVSTHGVWLLAFLR	VVSTHGVWLLAFLR	2	VVSTHGVWLLAFLR2	2108.81	4396.6	4576.99
A0A8I5Y9E9	A0A8I5Y9E9	A0A8I5Y9E9_RAT	Trem2	Triggering receptor expressed on myeloid cells 2	1	VVSTHGVWLLAFLR	VVSTHGVWLLAFLR	3	VVSTHGVWLLAFLR3	33411.6	22904.5	28151.9
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	VVSTLHIQHQDWMSGK	VVSTLHIQHQDWMSGK	2	VVSTLHIQHQDWMSGK2	160090	130906	113378
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	VVSTLHIQHQDWMSGK	VVSTLHIQHQDWMSGK	3	VVSTLHIQHQDWMSGK3	7.84992e+06	8.03498e+06	7.622e+06
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	VVSTLHIQHQDWMSGK	VVSTLHIQHQDWMSGK	4	VVSTLHIQHQDWMSGK4	23340.8	20843	21763.9
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	VVSTLHIQHQDWMSGKEFK	VVSTLHIQHQDWMSGKEFK	3	VVSTLHIQHQDWMSGKEFK3	6028.65	11780.2	14145.4
P20762	P20762	IGG2C_RAT		Ig gamma-2C chain C region	1	VVSTLHIQHQDWMSGKEFK	VVSTLHIQHQDWMSGKEFK	4	VVSTLHIQHQDWMSGKEFK4	25009.4	26187.4	17351.4
Q7TSU1	Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	1	VVSTSLDCLQK	VVSTSLDC(UniMod:4)LQK	2	VVSTSLDC(UniMod:4)LQK2	52521	47142.5	43263.7
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	VVSVDISFR	VVSVDISFR	2	VVSVDISFR2	221541	159656	117952
Q63357	Q63357	MYO1D_RAT	Myo1d	Unconventional myosin-Id	1	VVSVIAELLSTK	VVSVIAELLSTK	2	VVSVIAELLSTK2	6761.22	7169.19	3378.27
F1M4J1	F1M4J1	F1M4J1_RAT	LOC100294508	Dyslexia susceptibility 2-like	1	VVSYLWEQSR	VVSYLWEQSR	2	VVSYLWEQSR2	24773.1	21692.5	23835.9
A0A8I6AIT8	A0A8I6AIT8	A0A8I6AIT8_RAT	Msto1	Misato mitochondrial distribution and morphology regulator 1	1	VVTAEAIIPFPLVR	VVTAEAIIPFPLVR	2	VVTAEAIIPFPLVR2			3912.38
Q7TP21	Q7TP21	Q7TP21_RAT	Rpa1	Replication protein A subunit	1	VVTATLWGEDADK	VVTATLWGEDADK	2	VVTATLWGEDADK2	3040.98	6300.93	7711.15
G3V667	G3V667;Q63258	G3V667_RAT	Itga6	Integrin subunit alpha 6	0	VVTCAHR	VVTC(UniMod:4)AHR	2	VVTC(UniMod:4)AHR2			40603
D3ZM21	D3ZM21	D3ZM21_RAT	Comtd1	Catechol-O-methyltransferase domain containing 1	1	VVTCEVDAEPPK	VVTC(UniMod:4)EVDAEPPK	2	VVTC(UniMod:4)EVDAEPPK2	29632.9	24907.1	19018.3
F1M9Q3	F1M9Q3	F1M9Q3_RAT	Ltn1	E3 ubiquitin-protein ligase listerin	1	VVTCSLLALK	VVTC(UniMod:4)SLLALK	2	VVTC(UniMod:4)SLLALK2	5283.36		7373.98
A0A8I5ZJ94	A0A8I5ZJ94	A0A8I5ZJ94_RAT	Ank1	Ankyrin 1	1	VVTDETSVVLVSDK	VVTDETSVVLVSDK	2	VVTDETSVVLVSDK2	8129.29		5363.16
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	VVTDTDETELAR	VVTDTDETELAR	2	VVTDTDETELAR2	222568	210542	216807
M0RC54	M0RC54	M0RC54_RAT	Bod1l1	Biorientation of chromosomes in cell division 1-like 1	1	VVTGADVVQENDDK	VVTGADVVQENDDK	2	VVTGADVVQENDDK2	4543.32	3349.05	1068.83
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	VVTGAWLFSGSVNLVR	VVTGAWLFSGSVNLVR	2	VVTGAWLFSGSVNLVR2	74024.8	71301.9	60167.8
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	VVTGAWLFSGSVNLVR	VVTGAWLFSGSVNLVR	3	VVTGAWLFSGSVNLVR3	11201.1	9830.39	12232
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	VVTHDDCIPEVK	VVTHDDC(UniMod:4)IPEVK	3	VVTHDDC(UniMod:4)IPEVK3	25107.4	28569	24761.2
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	VVTHEDCIPEVK	VVTHEDC(UniMod:4)IPEVK	2	VVTHEDC(UniMod:4)IPEVK2	8667	4127.11	3367.11
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	VVTHEDCIPEVK	VVTHEDC(UniMod:4)IPEVK	3	VVTHEDC(UniMod:4)IPEVK3	99148.1	54330.1	77841.4
Q3MIE4	Q3MIE4	VAT1_RAT	Vat1	Synaptic vesicle membrane protein VAT-1 homolog	1	VVTHLLALYNQGHIKPR	VVTHLLALYNQGHIKPR	3	VVTHLLALYNQGHIKPR3	6636.24	2134.96	4362.61
Q3MIE4	Q3MIE4	VAT1_RAT	Vat1	Synaptic vesicle membrane protein VAT-1 homolog	1	VVTHLLALYNQGHIKPR	VVTHLLALYNQGHIKPR	4	VVTHLLALYNQGHIKPR4	52679.4	44979.6	56264.2
O70351	O70351	HCD2_RAT	Hsd17b10	3-hydroxyacyl-CoA dehydrogenase type-2	1	VVTIAPGLFATPLLTTLPDK	VVTIAPGLFATPLLTTLPDK	3	VVTIAPGLFATPLLTTLPDK3	14525.9	14225.8	18499.2
O70351	O70351	HCD2_RAT	Hsd17b10	3-hydroxyacyl-CoA dehydrogenase type-2	1	VVTIAPGLFATPLLTTLPDKVR	VVTIAPGLFATPLLTTLPDKVR	3	VVTIAPGLFATPLLTTLPDKVR3	14350.8	33996.2	29085.9
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	VVTLLSDPENIVK	VVTLLSDPENIVK	2	VVTLLSDPENIVK2	24792.7	25933.9	17595.8
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	VVTLLYDLVTEK	VVTLLYDLVTEK	2	VVTLLYDLVTEK2	230977	198027	179979
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	VVTLLYDLVTEK	VVTLLYDLVTEK	3	VVTLLYDLVTEK3	12695.9	10117.2	6869.07
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	VVTLMDAPGHK	VVTLMDAPGHK	2	VVTLMDAPGHK2	3322.75		3695.98
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	VVTLMDAPGHK	VVTLMDAPGHK	3	VVTLMDAPGHK3	38492.4	34377.2	38031.7
Q5FVF4	Q5FVF4	TM7S3_RAT	Tm7sf3	Transmembrane 7 superfamily member 3	1	VVTLTADDK	VVTLTADDK	2	VVTLTADDK2	34098.6	23635.4	26361.7
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	VVTMDTPESSSECSWVGSATPK	VVTMDTPESSSEC(UniMod:4)SWVGSATPK	3	VVTMDTPESSSEC(UniMod:4)SWVGSATPK3		3911.59	
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	VVTNQEGVFR	VVTNQEGVFR	2	VVTNQEGVFR2	719014	682891	720716
Q641Y2	Q641Y2	NDUS2_RAT	Ndufs2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	1	VVTNVTLNFGPQHPAAHGVLR	VVTNVTLNFGPQHPAAHGVLR	3	VVTNVTLNFGPQHPAAHGVLR3	2029.77	4182.73	
Q641Y2	Q641Y2	NDUS2_RAT	Ndufs2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	1	VVTNVTLNFGPQHPAAHGVLR	VVTNVTLNFGPQHPAAHGVLR	4	VVTNVTLNFGPQHPAAHGVLR4	78106.2	53182.3	48401.2
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	VVTNYNSAHDQNSNLLIEYFR	VVTNYNSAHDQNSNLLIEYFR	3	VVTNYNSAHDQNSNLLIEYFR3	20783.3	19470.3	16497.1
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	VVTPLSPPTNLHLEANPDTGVLTVSWER	VVTPLSPPTNLHLEANPDTGVLTVSWER	4	VVTPLSPPTNLHLEANPDTGVLTVSWER4	1.88129e+06	2.84742e+06	2.43132e+06
Q64537	Q64537	CPNS1_RAT	Capns1	Calpain small subunit 1	1	VVTRHPDLK	VVTRHPDLK	2	VVTRHPDLK2	4294.05		
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	VVTTEHFDLSQEMER	VVTTEHFDLSQEMER	3	VVTTEHFDLSQEMER3	17843.1	8432.12	
P56571	P56571	ES1_RAT		ES1 protein homolog, mitochondrial	1	VVTTPAFMCETELHHIHDGIGAMVK	VVTTPAFMC(UniMod:4)ETELHHIHDGIGAMVK	3	VVTTPAFMC(UniMod:4)ETELHHIHDGIGAMVK3	8585.78		2422.69
P56571	P56571	ES1_RAT		ES1 protein homolog, mitochondrial	1	VVTTPAFMCETELHHIHDGIGAMVK	VVTTPAFMC(UniMod:4)ETELHHIHDGIGAMVK	4	VVTTPAFMC(UniMod:4)ETELHHIHDGIGAMVK4	14476.7	34363.6	23661.9
D4A0G7	D4A0G7	D4A0G7_RAT	Rab37	RAB37, member RAS oncogene family	1	VVTVDGAR	VVTVDGAR	2	VVTVDGAR2	114806	97626.3	77874.5
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	VVTVFSVADGYSENNVFYGHHAK	VVTVFSVADGYSENNVFYGHHAK	3	VVTVFSVADGYSENNVFYGHHAK3	17583.5	11745.6	19258.3
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	VVTVFSVADGYSENNVFYGHHAK	VVTVFSVADGYSENNVFYGHHAK	4	VVTVFSVADGYSENNVFYGHHAK4	56899.2	56968.2	58047.3
B2RZ78	B2RZ78	VPS29_RAT	Vps29	Vacuolar protein sorting-associated protein 29	1	VVTVGQFK	VVTVGQFK	2	VVTVGQFK2	122140	94427.9	90701.8
Q3MIE4	Q3MIE4	VAT1_RAT	Vat1	Synaptic vesicle membrane protein VAT-1 homolog	1	VVTYGMANLLTGPK	VVTYGMANLLTGPK	2	VVTYGMANLLTGPK2	72815.2	72947.3	71073.1
Q3MIE4	Q3MIE4	VAT1_RAT	Vat1	Synaptic vesicle membrane protein VAT-1 homolog	1	VVTYGMANLLTGPK	VVTYGMANLLTGPK	3	VVTYGMANLLTGPK3	6835.78	9320.96	8841.02
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	VVTYHCQHEAYEEALAVLAR	VVTYHC(UniMod:4)QHEAYEEALAVLAR	3	VVTYHC(UniMod:4)QHEAYEEALAVLAR3	2436.94		
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	VVTYHCQHEAYEEALAVLAR	VVTYHC(UniMod:4)QHEAYEEALAVLAR	4	VVTYHC(UniMod:4)QHEAYEEALAVLAR4	5422.57	4671.83	8393.67
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	VVVAESFDDIVNAEDK	VVVAESFDDIVNAEDK	2	VVVAESFDDIVNAEDK2	8477.01	9757.91	2053.52
Q5M7U6	A0A8I6GGR3;Q5M7U6	ARP2_RAT	Actr2	Actin-related protein 2	0	VVVCDNGTGFVK	VVVC(UniMod:4)DNGTGFVK	2	VVVC(UniMod:4)DNGTGFVK2	408494	363068	420353
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	VVVCNLYPFVK	VVVC(UniMod:4)NLYPFVK	2	VVVC(UniMod:4)NLYPFVK2	25242.6	26320.7	34223.8
E9PT23	E9PT23	S38AA_RAT	Slc38a10	Putative sodium-coupled neutral amino acid transporter 10	1	VVVDEGQDQEGPEEK	VVVDEGQDQEGPEEK	2	VVVDEGQDQEGPEEK2	18374.2	16142.9	16947.7
D4A4L5	D4A4L5	D4A4L5_RAT	Isca2	Iron-sulfur cluster assembly 2	1	VVVDSDSLAYVK	VVVDSDSLAYVK	2	VVVDSDSLAYVK2	9628.43	7139.95	5588.84
A0A8I6AGL0	A0A8I6AGL0	A0A8I6AGL0_RAT	Ankrd44	Ankyrin repeat domain 44	1	VVVEELLAK	VVVEELLAK	2	VVVEELLAK2	11769.9	12252.2	14323.6
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	VVVEEVQVVELK	VVVEEVQVVELK	2	VVVEEVQVVELK2	180833	193478	192293
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	VVVEEVQVVELK	VVVEEVQVVELK	3	VVVEEVQVVELK3	8519.66	7668.77	9281.34
Q68FX1	Q68FX1	MPI_RAT	Mpi	Mannose-6-phosphate isomerase	1	VVVEQLNLLVK	VVVEQLNLLVK	2	VVVEQLNLLVK2	1423.92	2278.93	2176.3
Q62825	Q62825	EXOC3_RAT	Exoc3	Exocyst complex component 3	1	VVVEYLR	VVVEYLR	2	VVVEYLR2	43345.4	56202.7	54911
Q9ESH6	Q6AY00;Q9ESH6	GLRX1_RAT	Glrx	Glutaredoxin-1	0	VVVFIKPTCPYCR	VVVFIKPTC(UniMod:4)PYC(UniMod:4)R	3	VVVFIKPTC(UniMod:4)PYC(UniMod:4)R3	96691.1	53065	73816.6
A0A8I5ZM79	A0A8I5ZM79	A0A8I5ZM79_RAT	Psmd7	Proteasome 26S subunit, non-ATPase 7	1	VVVHPLVLLSVVDHFNR	VVVHPLVLLSVVDHFNR	2	VVVHPLVLLSVVDHFNR2	3757.52	1898.06	
A0A8I5ZM79	A0A8I5ZM79	A0A8I5ZM79_RAT	Psmd7	Proteasome 26S subunit, non-ATPase 7	1	VVVHPLVLLSVVDHFNR	VVVHPLVLLSVVDHFNR	3	VVVHPLVLLSVVDHFNR3	31383.2	33071.8	32569.3
A0A8I5ZM79	A0A8I5ZM79	A0A8I5ZM79_RAT	Psmd7	Proteasome 26S subunit, non-ATPase 7	1	VVVHPLVLLSVVDHFNR	VVVHPLVLLSVVDHFNR	4	VVVHPLVLLSVVDHFNR4	57870.7	63926.9	53421.9
A0A8I5Y1T6	A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	1	VVVHQETEISEE	VVVHQETEISEE	2	VVVHQETEISEE2	18513.2	17186.1	11549.5
A0A8I6GBD2	A0A8I6GBD2	A0A8I6GBD2_RAT	Actr10	Actin related protein 10	1	VVVIESVLCPSHFR	VVVIESVLC(UniMod:4)PSHFR	3	VVVIESVLC(UniMod:4)PSHFR3	35508		29482.9
B1WBU6	B1WBU6;A0A8I5ZYI4	B1WBU6_RAT	Smox	Spermine oxidase	0	VVVIGAGLAGLAAAR	VVVIGAGLAGLAAAR	2	VVVIGAGLAGLAAAR2	3046.53	3164.38	1694.62
Q6J1Y9	Q6J1Y9	UBP19_RAT	Usp19	Ubiquitin carboxyl-terminal hydrolase 19	1	VVVLEVQQRPQVPSIPISK	VVVLEVQQRPQVPSIPISK	3	VVVLEVQQRPQVPSIPISK3	6134.89	7473.49	8178.77
P61227	P61227;A0A0G2JTW1;D3ZK56	RAP2B_RAT	Rap2b	Ras-related protein Rap-2b	0	VVVLGSGGVGK	VVVLGSGGVGK	2	VVVLGSGGVGK2	962775	882145	885283
P51583	P51583	PUR6_RAT	Paics	Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase	1	VVVLMGSTSDLGHCEK	VVVLMGSTSDLGHC(UniMod:4)EK	3	VVVLMGSTSDLGHC(UniMod:4)EK3	62202.2	57517.5	62557.8
Q5I6B8	Q5I6B8	PI51C_RAT	Pip5k1c	Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma	1	VVVMNNVLPR	VVVMNNVLPR	2	VVVMNNVLPR2	22580.9	18839.8	19485.9
D3ZVM5	D3ZVM5	D3ZVM5_RAT	Hspa12b	Heat shock protein family A (Hsp70) member 12B	1	VVVPHDVGLTILK	VVVPHDVGLTILK	3	VVVPHDVGLTILK3	9774.15	12936.5	5779.07
Q5U211	Q5U211	SNX3_RAT	Snx3	Sorting nexin-3	1	VVVPPLPGK	VVVPPLPGK	2	VVVPPLPGK2	26121.8	25780.1	25565.3
D4A9L2	D4A9L2	D4A9L2_RAT	Srsf1	Serine/arginine-rich splicing factor 1	1	VVVSGLPPSGSWQDLK	VVVSGLPPSGSWQDLK	2	VVVSGLPPSGSWQDLK2	48830.7	48656	59652
B2GV06	B2GV06	SCOT1_RAT	Oxct1	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial	1	VVVTMEHSAK	VVVTMEHSAK	2	VVVTMEHSAK2	100266	67683.9	64640.1
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VVVTVADQVVVLAR	VVVTVADQVVVLAR	2	VVVTVADQVVVLAR2	39663.3	29915.4	23466.2
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VVVTVADQVVVLAR	VVVTVADQVVVLAR	3	VVVTVADQVVVLAR3	8430.8	6886.8	12776.6
D4A2H2	D4A2H2	SPTC1_RAT	Sptlc1	Serine palmitoyltransferase 1	1	VVVTVEQTDEELQR	VVVTVEQTDEELQR	2	VVVTVEQTDEELQR2	3251.79	3348.05	
D3ZHW0	D3ZHW0	D3ZHW0_RAT	Dhx29	ATP-dependent RNA helicase DHX29	1	VVVVAGETGSGK	VVVVAGETGSGK	2	VVVVAGETGSGK2	6191.94	9242.77	9163.44
A0A8I6ACU9	A0A8I6ACU9	A0A8I6ACU9_RAT	Timm50	Mitochondrial import inner membrane translocase subunit TIM50	1	VVVVDCK	VVVVDC(UniMod:4)K	2	VVVVDC(UniMod:4)K2	93234.6	81829.9	103676
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	VVVVGDQSAGK	VVVVGDQSAGK	2	VVVVGDQSAGK2	302794	204307	256817
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	VVVVQAISALCQK	VVVVQAISALC(UniMod:4)QK	2	VVVVQAISALC(UniMod:4)QK2	77281.4	77441.9	53218.8
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	VVVVQAISALCQK	VVVVQAISALC(UniMod:4)QK	3	VVVVQAISALC(UniMod:4)QK3	24826.1	38881.3	16865.2
Q9JMA8	Q9JMA8	Q9JMA8_RAT	Extl3	Exostosin-like glycosyltransferase 3	1	VVVVWNSPK	VVVVWNSPK	2	VVVVWNSPK2	8464.56		3875.88
Q5U2M6	Q5U2M6	DCAF8_RAT	Dcaf8	DDB1- and CUL4-associated factor 8	1	VVVWDWVR	VVVWDWVR	2	VVVWDWVR2	17946.6	12386.5	14162.4
Q5M9G8	Q5M9G8	DCA11_RAT	Dcaf11	DDB1- and CUL4-associated factor 11	1	VVVYDLLSGHIVK	VVVYDLLSGHIVK	3	VVVYDLLSGHIVK3	13093.7	17372.8	10302.7
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	VVVYGGEGDNLK	VVVYGGEGDNLK	2	VVVYGGEGDNLK2	33513.9	29598.9	38300.9
P08753	P08753	GNAI3_RAT	Gnai3	Guanine nucleotide-binding protein G(i) subunit alpha-3	1	VVVYSNTIQSIIAIIR	VVVYSNTIQSIIAIIR	2	VVVYSNTIQSIIAIIR2	9448.97	5358.72	7264.92
P08753	P08753	GNAI3_RAT	Gnai3	Guanine nucleotide-binding protein G(i) subunit alpha-3	1	VVVYSNTIQSIIAIIR	VVVYSNTIQSIIAIIR	3	VVVYSNTIQSIIAIIR3	8048.42	14272.4	3319.6
Q5XHY5	Q5XHY5	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	1	VVWDLDRPLETDCTLELLK	VVWDLDRPLETDC(UniMod:4)TLELLK	3	VVWDLDRPLETDC(UniMod:4)TLELLK3	17977.4	15467.2	16609.3
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	VVWPCYDSR	VVWPC(UniMod:4)YDSR	2	VVWPC(UniMod:4)YDSR2	4418.89		
D4ADE8	D4ADE8	D4ADE8_RAT	Ddx3x	RNA helicase	1	VVWVEEIDKR	VVWVEEIDKR	2	VVWVEEIDKR2		2974.61	5647.65
D4ADE8	D4ADE8	D4ADE8_RAT	Ddx3x	RNA helicase	1	VVWVEEIDKR	VVWVEEIDKR	3	VVWVEEIDKR3	105624	97581.2	76689.9
A0A8I6A7A4	A0A8I6A7A4	A0A8I6A7A4_RAT	Ddx3y	RNA helicase	1	VVWVEELDKR	VVWVEELDKR	2	VVWVEELDKR2	11672.1		
Q62656	Q62656	PTPRZ_RAT	Ptprz1	Receptor-type tyrosine-protein phosphatase zeta	1	VVYDTMIEK	VVYDTMIEK	2	VVYDTMIEK2	178250	243764	215576
Q99P74	Q99P74	RB27B_RAT	Rab27b	Ras-related protein Rab-27B	1	VVYDTQGADGSSGK	VVYDTQGADGSSGK	2	VVYDTQGADGSSGK2	807748	770924	873133
Q63621	Q63621	IL1AP_RAT	Il1rap	Interleukin-1 receptor accessory protein	1	VVYEKEPGEELVIPCK	VVYEKEPGEELVIPC(UniMod:4)K	2	VVYEKEPGEELVIPC(UniMod:4)K2	5596.86	4306.57	7794.24
Q63621	Q63621	IL1AP_RAT	Il1rap	Interleukin-1 receptor accessory protein	1	VVYEKEPGEELVIPCK	VVYEKEPGEELVIPC(UniMod:4)K	3	VVYEKEPGEELVIPC(UniMod:4)K3	49056	49186.3	45178.9
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	VVYILEK	VVYILEK	2	VVYILEK2	92604	116649	90497.6
Q63415	Q63415	PCSK6_RAT	Pcsk6	Proprotein convertase subtilisin/kexin type 6	1	VVYLEHVVVR	VVYLEHVVVR	3	VVYLEHVVVR3	1792.7		
Q923M1	Q923M1	MSRA_RAT	Msra	Mitochondrial peptide methionine sulfoxide reductase	1	VVYRPEHVSFEELLK	VVYRPEHVSFEELLK	4	VVYRPEHVSFEELLK4	1145.15	1707	2918.27
A0A8I6A5B0	A0A8I6A5B0	A0A8I6A5B0_RAT	Hycc2	Family with sequence similarity 126, member B	1	VVYSDLHPQR	VVYSDLHPQR	3	VVYSDLHPQR3	15591.7	18600.9	12979.7
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	VVYTCDEGYQLLGEIDYR	VVYTC(UniMod:4)DEGYQLLGEIDYR	3	VVYTC(UniMod:4)DEGYQLLGEIDYR3	28384	30176.9	27231.9
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	VVYYPTR	VVYYPTR	2	VVYYPTR2	137900	165267	153273
A0A8I6ANR6	A0A8I6ANR6	A0A8I6ANR6_RAT	Chuk	IkappaB kinase	1	VWAEAVHYVSGLK	VWAEAVHYVSGLK	3	VWAEAVHYVSGLK3	22241.8	20761.4	18918.3
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	VWAHYEEQPVEEVMPVLEEK	VWAHYEEQPVEEVMPVLEEK	3	VWAHYEEQPVEEVMPVLEEK3	30872.6	33389.4	29134.1
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	VWAHYEEQPVEEVMPVLEEKER	VWAHYEEQPVEEVMPVLEEKER	3	VWAHYEEQPVEEVMPVLEEKER3	7085.79		9452.26
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	VWAHYEEQPVEEVMPVLEEKER	VWAHYEEQPVEEVMPVLEEKER	4	VWAHYEEQPVEEVMPVLEEKER4	33548.1	26025.9	28485.4
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	VWAVGLSR	VWAVGLSR	2	VWAVGLSR2	23092.3	25229.5	22843.8
P33436	P33436	MMP2_RAT	Mmp2	72 kDa type IV collagenase	1	VWCATTTNYDDDRK	VWC(UniMod:4)ATTTNYDDDRK	3	VWC(UniMod:4)ATTTNYDDDRK3	7008.82	4204.21	
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	VWCTTNEGEPMR	VWC(UniMod:4)TTNEGEPMR	2	VWC(UniMod:4)TTNEGEPMR2	35096.8	42441.6	38146.9
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	VWCVASLR	VWC(UniMod:4)VASLR	2	VWC(UniMod:4)VASLR2	293470	280650	302998
Q5XIG8	Q5XIG8	STRAP_RAT	Strap	Serine-threonine kinase receptor-associated protein	1	VWDAVSGDELMTLAHK	VWDAVSGDELMTLAHK	2	VWDAVSGDELMTLAHK2	6964.06	4893.04	5644.6
Q5XIG8	Q5XIG8	STRAP_RAT	Strap	Serine-threonine kinase receptor-associated protein	1	VWDAVSGDELMTLAHK	VWDAVSGDELMTLAHK	3	VWDAVSGDELMTLAHK3	30620.8	32128	38404.1
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	VWDISGLR	VWDISGLR	2	VWDISGLR2	91837.9	113977	100632
A0A8I6A9T1	A0A8I6A9T1	A0A8I6A9T1_RAT	Traf7	TNF receptor associated factor 7	1	VWDIVGTELK	VWDIVGTELK	2	VWDIVGTELK2	7528.05	7885.46	8027.75
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	VWDLFPEADK	VWDLFPEADK	2	VWDLFPEADK2	34469.2	25617.1	32259.1
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	VWDLFPEADKVR	VWDLFPEADKVR	2	VWDLFPEADKVR2	15790.1	8715.97	13093.7
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	VWDLFPEADKVR	VWDLFPEADKVR	3	VWDLFPEADKVR3	101167	117670	119179
P36876	P36876	2ABA_RAT	Ppp2r2a	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	1	VWDLNMENRPVETYQVHEYLR	VWDLNMENRPVETYQVHEYLR	3	VWDLNMENRPVETYQVHEYLR3	5642.65		1850.39
P36876	P36876	2ABA_RAT	Ppp2r2a	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	1	VWDLNMENRPVETYQVHEYLR	VWDLNMENRPVETYQVHEYLR	4	VWDLNMENRPVETYQVHEYLR4	19625.2	15303.6	17385.3
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	VWDSVSLSTLHVIGLGTFER	VWDSVSLSTLHVIGLGTFER	3	VWDSVSLSTLHVIGLGTFER3	32531.7	39158	39263.4
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	VWDSVSLSTLHVLGLGVFDR	VWDSVSLSTLHVLGLGVFDR	3	VWDSVSLSTLHVLGLGVFDR3	6050.87		4943.71
A0A8I6A9T1	A0A8I6A9T1	A0A8I6A9T1_RAT	Traf7	TNF receptor associated factor 7	1	VWDTCTTYK	VWDTC(UniMod:4)TTYK	2	VWDTC(UniMod:4)TTYK2		4828.45	
Q9JK72	Q9JK72	CCS_RAT	Ccs	Copper chaperone for superoxide dismutase	1	VWDVIGR	VWDVIGR	2	VWDVIGR2	184864	196241	199097
A0A8I5Y120	A0A8I5Y120	A0A8I5Y120_RAT	Brap	BRCA1 associated protein	1	VWDYAGDNYVHR	VWDYAGDNYVHR	2	VWDYAGDNYVHR2	1140.92		
A0A8I5Y120	A0A8I5Y120	A0A8I5Y120_RAT	Brap	BRCA1 associated protein	1	VWDYAGDNYVHR	VWDYAGDNYVHR	3	VWDYAGDNYVHR3	2629.03	2128.91	1963.12
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	VWDYETGDFER	VWDYETGDFER	2	VWDYETGDFER2	44578.2	27155.8	31835.6
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	VWEAATIK	VWEAATIK	2	VWEAATIK2	26743.4	34461.6	24786.8
F7F875	F7F875	F7F875_RAT	Srpra	SRP receptor subunit alpha	1	VWELGGCANK	VWELGGC(UniMod:4)ANK	2	VWELGGC(UniMod:4)ANK2	53682	58982.9	63551.1
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	VWELSDIDHDGK	VWELSDIDHDGK	2	VWELSDIDHDGK2	10790.1	7870.15	7819.2
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	VWELSDIDHDGK	VWELSDIDHDGK	3	VWELSDIDHDGK3	26687.1	24001.6	32707.2
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VWEQIDQMK	VWEQIDQMK	2	VWEQIDQMK2	225058	297271	247395
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VWEQIDQMKEQPWVSVQPR	VWEQIDQMKEQPWVSVQPR	3	VWEQIDQMKEQPWVSVQPR3		16641.2	16880.4
M0RCS2	M0RCS2	M0RCS2_RAT	Tbl2	Transducin (beta)-like 2	1	VWEVCFGK	VWEVC(UniMod:4)FGK	2	VWEVC(UniMod:4)FGK2	13705.9	12208.6	11545
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	VWFELIQGSVTK	VWFELIQGSVTK	2	VWFELIQGSVTK2		16800.1	7316.25
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	VWFPHELDGQGARPR	VWFPHELDGQGARPR	4	VWFPHELDGQGARPR4	9407.49	10455.2	7026.07
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	VWFVSNIDGTHIAK	VWFVSNIDGTHIAK	2	VWFVSNIDGTHIAK2	8047.15	13410.9	8008.23
Q6P6V0	Q6P6V0	G6PI_RAT	Gpi	Glucose-6-phosphate isomerase	1	VWFVSNIDGTHIAK	VWFVSNIDGTHIAK	3	VWFVSNIDGTHIAK3	83956	100056	66514.8
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	VWGPFCGEK	VWGPFC(UniMod:4)GEK	2	VWGPFC(UniMod:4)GEK2	3.41284e+06	3.71711e+06	3.9077e+06
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	VWGQVWHSIQTLK	VWGQVWHSIQTLK	3	VWGQVWHSIQTLK3	18335.1	28600.1	19054.9
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	VWGVPIPVFHHK	VWGVPIPVFHHK	3	VWGVPIPVFHHK3	46978	58089.1	42516.6
Q6VV72	Q6VV72	IF1A_RAT	Eif1a	Eukaryotic translation initiation factor 1A	1	VWINTSDIILIGLR	VWINTSDIILIGLR	2	VWINTSDIILIGLR2	6975.27	15794.3	4350.3
A0A8I6A8I7	A0A8I6A8I7	A0A8I6A8I7_RAT	Eif1ax	Eukaryotic translation initiation factor 4C	1	VWINTSDIILVGLR	VWINTSDIILVGLR	2	VWINTSDIILVGLR2	37582.9	43100.3	35868.2
A0A8I6A8I7	A0A8I6A8I7	A0A8I6A8I7_RAT	Eif1ax	Eukaryotic translation initiation factor 4C	1	VWINTSDIILVGLR	VWINTSDIILVGLR	3	VWINTSDIILVGLR3	9143.08	12689.5	7677.93
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	VWITNGGLANIFTVFAK	VWITNGGLANIFTVFAK	2	VWITNGGLANIFTVFAK2		6790.19	7321.61
D4AC45	D4AC45	D4AC45_RAT	Agpat2	1-acyl-sn-glycerol-3-phosphate acyltransferase	1	VWIYPEGTR	VWIYPEGTR	2	VWIYPEGTR2	10980.9	11711.2	7572.02
O88994	O88994	MARC2_RAT	Mtarc2	Mitochondrial amidoxime reducing component 2	1	VWIYPIK	VWIYPIK	2	VWIYPIK2	86318.1	67933.6	80946.6
P84100	P84100	RL19_RAT	Rpl19	Large ribosomal subunit protein eL19	1	VWLDPNETNEIANANSR	VWLDPNETNEIANANSR	2	VWLDPNETNEIANANSR2	24712.2	18558.8	21558.5
Q5FVN0	Q5FVN0	MBOA5_RAT	Lpcat3	Lysophospholipid acyltransferase 5	1	VWLFETTPR	VWLFETTPR	2	VWLFETTPR2	178878	139170	164576
A0A8I5ZZZ6	A0A8I5ZZZ6	A0A8I5ZZZ6_RAT	Riok3	Serine/threonine-protein kinase RIO3	1	VWLIDVSQSVEPTHPHGLEFLFR	VWLIDVSQSVEPTHPHGLEFLFR	3	VWLIDVSQSVEPTHPHGLEFLFR3	9301.6	17872.6	3363.39
A0A8I5ZZZ6	A0A8I5ZZZ6	A0A8I5ZZZ6_RAT	Riok3	Serine/threonine-protein kinase RIO3	1	VWLIDVSQSVEPTHPHGLEFLFR	VWLIDVSQSVEPTHPHGLEFLFR	4	VWLIDVSQSVEPTHPHGLEFLFR4	8226.49	25701.3	
Q3T1I9	Q3T1I9	RPAP1_RAT	Rpap1	RNA polymerase II-associated protein 1	1	VWLLADK	VWLLADK	2	VWLLADK2	4276.73	3521.51	
Q3T1I9	Q3T1I9	RPAP1_RAT	Rpap1	RNA polymerase II-associated protein 1	1	VWLLADKDLR	VWLLADKDLR	3	VWLLADKDLR3	9497.88	8915.39	6659.46
O08561	O08561	PI4KB_RAT	Pi4kb	Phosphatidylinositol 4-kinase beta	1	VWLPTAGFDHHVVR	VWLPTAGFDHHVVR	3	VWLPTAGFDHHVVR3	10906.3	6659.11	7308.64
O08561	O08561	PI4KB_RAT	Pi4kb	Phosphatidylinositol 4-kinase beta	1	VWLPTAGFDHHVVR	VWLPTAGFDHHVVR	4	VWLPTAGFDHHVVR4	14305.2	14630.5	16532.8
Q6XQN1	Q6XQN1	PNCB_RAT	Naprt	Nicotinate phosphoribosyltransferase	1	VWLQGAQEPCTVKPAQVEPLLR	VWLQGAQEPC(UniMod:4)TVKPAQVEPLLR	3	VWLQGAQEPC(UniMod:4)TVKPAQVEPLLR3	6914.28		4429.67
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	VWLQLVK	VWLQLVK	2	VWLQLVK2	11199	13599.6	20974.1
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	VWLQYQCLWDMQAENIYNR	VWLQYQC(UniMod:4)LWDMQAENIYNR	3	VWLQYQC(UniMod:4)LWDMQAENIYNR3	9852.53	10380.1	11989.2
O88422	O88422	GALT5_RAT	Galnt5	Polypeptide N-acetylgalactosaminyltransferase 5	1	VWMCGGEIEIIPCSR	VWMC(UniMod:4)GGEIEIIPC(UniMod:4)SR	2	VWMC(UniMod:4)GGEIEIIPC(UniMod:4)SR2			3883.6
P42335	P42335;Q80ZG2	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	0	VWMIDFGK	VWMIDFGK	2	VWMIDFGK2	57471.1	63270.9	65305.6
A0A8I6AEY8	A0A8I6AEY8	A0A8I6AEY8_RAT	Vps8	VPS8 subunit of CORVET complex	1	VWMTFPYGR	VWMTFPYGR	2	VWMTFPYGR2	4543.71	7396.03	
P63245	P63245	RACK1_RAT	Rack1	Small ribosomal subunit protein RACK1	1	VWNLANCK	VWNLANC(UniMod:4)K	2	VWNLANC(UniMod:4)K2	35411	39337.3	41435.4
A0A8I6A3H1	A0A8I6A3H1	A0A8I6A3H1_RAT	Ero1b	Endoplasmic reticulum oxidoreductase 1 beta	1	VWNSIYEENCFKPR	VWNSIYEENC(UniMod:4)FKPR	3	VWNSIYEENC(UniMod:4)FKPR3	4064.18		1923.91
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	VWNVITGR	VWNVITGR	2	VWNVITGR2	19743.1		14752.3
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	VWNWQSR	VWNWQSR	2	VWNWQSR2	150903	169836	154242
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	VWPNVEADGSEPTR	VWPNVEADGSEPTR	2	VWPNVEADGSEPTR2	14813.8	29058.8	20200.1
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	VWQCGGSLEIIPCSR	VWQC(UniMod:4)GGSLEIIPC(UniMod:4)SR	2	VWQC(UniMod:4)GGSLEIIPC(UniMod:4)SR2	51844.9	49879.3	55712.1
A0A0G2JWB6	A0A0G2JWB6	A0A0G2JWB6_RAT	Pxdn	Peroxidasin	1	VWQDCCEDCR	VWQDC(UniMod:4)C(UniMod:4)EDC(UniMod:4)R	2	VWQDC(UniMod:4)C(UniMod:4)EDC(UniMod:4)R2	35715.6	33442	31633.8
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	VWQILER	VWQILER	2	VWQILER2	31410.7	28498.9	39235
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	VWQLGSSSPNFTLEGHEK	VWQLGSSSPNFTLEGHEK	3	VWQLGSSSPNFTLEGHEK3	170747	180514	195474
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	VWQLQDLSFQTAAR	VWQLQDLSFQTAAR	2	VWQLQDLSFQTAAR2	147667	153499	131182
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	VWQLQDLSFQTAAR	VWQLQDLSFQTAAR	3	VWQLQDLSFQTAAR3	24769.4	37491.5	20607.7
P63245	P63245	RACK1_RAT	Rack1	Small ribosomal subunit protein RACK1	1	VWQVTIGTR	VWQVTIGTR	2	VWQVTIGTR2	24312.2	19014	15435.3
Q99376	Q99376	TFR1_RAT	Tfrc	Transferrin receptor protein 1	1	VWRDEHYVK	VWRDEHYVK	3	VWRDEHYVK3	9099.37	20648.9	20222.3
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	VWSAALVK	VWSAALVK	2	VWSAALVK2	5800.74	9353.58	5195.25
P33436	P33436	MMP2_RAT	Mmp2	72 kDa type IV collagenase	1	VWSDVTPLR	VWSDVTPLR	2	VWSDVTPLR2	30046.1	26154	27361.5
Q99JE6	Q99JE6	PLCB3_RAT	Plcb3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3	1	VWSEELFK	VWSEELFK	2	VWSEELFK2	68842.5	91685.8	78910.4
Q6YDN8	Q6YDN8	Q6YDN8_RAT	Gid8	GID complex subunit 8 homolog	1	VWSEVNQAVLDYENR	VWSEVNQAVLDYENR	2	VWSEVNQAVLDYENR2	7044.77	8977.04	3950.3
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	VWSHQTLK	VWSHQTLK	2	VWSHQTLK2	9120.87	8562.47	8970.83
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	VWTANPQQFVEDEDDDTFSYTVR	VWTANPQQFVEDEDDDTFSYTVR	3	VWTANPQQFVEDEDDDTFSYTVR3	7647.53	16457	10483.1
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	VWTELATCR	VWTELATC(UniMod:4)R	2	VWTELATC(UniMod:4)R2	566575	645084	581347
F1LQZ3	F1LQZ3	F1LQZ3_RAT	Kif3a	Kinesin-like protein	1	VWTMLMAAK	VWTMLMAAK	2	VWTMLMAAK2	30485.1	33707.7	24305.3
P29975	P29975	AQP1_RAT	Aqp1	Aquaporin-1	1	VWTSGQVEEYDLDADDINSR	VWTSGQVEEYDLDADDINSR	3	VWTSGQVEEYDLDADDINSR3	217346	209539	228951
P29975	P29975	AQP1_RAT	Aqp1	Aquaporin-1	1	VWTSGQVEEYDLDADDINSRVEMKPK	VWTSGQVEEYDLDADDINSRVEMKPK	4	VWTSGQVEEYDLDADDINSRVEMKPK4	14571.2	18445.6	11818.1
Q9JJH5	O35552;Q9JJH5	F262_RAT	Pfkfb2	6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2	0	VWTSQLK	VWTSQLK	2	VWTSQLK2	7251.64	11773.8	4527.38
Q9EPF2	Q9EPF2	MUC18_RAT	Mcam	Cell surface glycoprotein MUC18	1	VWVEVEPVGLLK	VWVEVEPVGLLK	2	VWVEVEPVGLLK2	14241.5	27173.2	18816.7
F7EQT9	F7EQT9	F7EQT9_RAT	Agpat1	1-acyl-sn-glycerol-3-phosphate acyltransferase	1	VWVFPEGTR	VWVFPEGTR	2	VWVFPEGTR2	67165.2	82913	74364.6
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	VWVLEEAGK	VWVLEEAGK	2	VWVLEEAGK2	103237	101650	105408
A0A8I5ZTL7	A0A8I5ZTL7;A0A8I6A6I4;A0A8I5ZV31	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	0	VWVLTGDK	VWVLTGDK	2	VWVLTGDK2	173547	191302	170539
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	VWVVATK	VWVVATK	2	VWVVATK2	29949.4	35972.7	34668.4
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	VWVYPPEK	VWVYPPEK	2	VWVYPPEK2	551897	472333	527955
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	VWVYPPEKK	VWVYPPEKK	2	VWVYPPEKK2	72764.2	50937.4	42710.1
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	VWVYPPEKK	VWVYPPEKK	3	VWVYPPEKK3	319450	323526	290026
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	VWYEWAVTAPVCSSIHNPTGR	VWYEWAVTAPVC(UniMod:4)SSIHNPTGR	3	VWYEWAVTAPVC(UniMod:4)SSIHNPTGR3	40909.6	46892.6	36750.9
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	VWYHVCSNR	VWYHVC(UniMod:4)SNR	3	VWYHVC(UniMod:4)SNR3	25978.7	18816.4	22303.1
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	VWYNVENWRPAVTSPDK	VWYNVENWRPAVTSPDK	3	VWYNVENWRPAVTSPDK3	26198.6	22405.9	30699.7
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	VYAALGNHDFHPK	VYAALGNHDFHPK	2	VYAALGNHDFHPK2	8672.84	10313.5	7947.85
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	VYAALGNHDFHPK	VYAALGNHDFHPK	3	VYAALGNHDFHPK3	241225	214676	184284
P19836	P19836;Q9QZC4	PCY1A_RAT	Pcyt1a	Choline-phosphate cytidylyltransferase A	0	VYADGIFDLFHSGHAR	VYADGIFDLFHSGHAR	4	VYADGIFDLFHSGHAR4	5442.94		
P14882	P14882	PCCA_RAT	Pcca	Propionyl-CoA carboxylase alpha chain, mitochondrial	1	VYAEDPYK	VYAEDPYK	2	VYAEDPYK2	36179.5	33651.4	33744.5
A0A8I6GLB8	A0A8I6GLB8	A0A8I6GLB8_RAT	Chmp1a	Charged multivesicular body protein 1A	1	VYAENAIR	VYAENAIR	2	VYAENAIR2	14072	15459	22346.9
P09330	P09330;A0A0G2JSV3;P60892	PRPS2_RAT	Prps2	Ribose-phosphate pyrophosphokinase 2	0	VYAILTHGIFSGPAISR	VYAILTHGIFSGPAISR	2	VYAILTHGIFSGPAISR2	4715.29		
P09330	P09330;A0A0G2JSV3;P60892	PRPS2_RAT	Prps2	Ribose-phosphate pyrophosphokinase 2	0	VYAILTHGIFSGPAISR	VYAILTHGIFSGPAISR	3	VYAILTHGIFSGPAISR3	50754.4	42135.9	40175
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	VYALPEDLVEVNPK	VYALPEDLVEVNPK	2	VYALPEDLVEVNPK2	135784	141500	136862
D3ZW15	D3ZW15	D3ZW15_RAT	Sec24b	SEC24 homolog B, COPII coat complex component	1	VYAMCQMK	VYAMC(UniMod:4)QMK	2	VYAMC(UniMod:4)QMK2	9481.43	14684	11216.7
Q4V8B7	Q4V8B7	HSDL1_RAT	Hsdl1	Inactive hydroxysteroid dehydrogenase-like protein 1	1	VYAQHAVSTLGISK	VYAQHAVSTLGISK	2	VYAQHAVSTLGISK2	11699.9	6928.23	6493.8
Q4V8B7	Q4V8B7	HSDL1_RAT	Hsdl1	Inactive hydroxysteroid dehydrogenase-like protein 1	1	VYAQHAVSTLGISK	VYAQHAVSTLGISK	3	VYAQHAVSTLGISK3	268545	292398	287517
Q9JLU4	Q9JLU4	SHAN3_RAT	Shank3	SH3 and multiple ankyrin repeat domains protein 3	1	VYAQNLIDDK	VYAQNLIDDK	2	VYAQNLIDDK2	4073.06		4132.92
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	VYATILNAGTNTDGCK	VYATILNAGTNTDGC(UniMod:4)K	2	VYATILNAGTNTDGC(UniMod:4)K2	4066.23	5574.76	
P49651	P49651	P2RY1_RAT	P2ry1	P2Y purinoceptor 1	1	VYATYQVTR	VYATYQVTR	2	VYATYQVTR2	159175	193470	155285
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	VYAVICDLK	VYAVIC(UniMod:4)DLK	2	VYAVIC(UniMod:4)DLK2	16539.9	22468.4	
Q6AY63	Q6AY63	NUDT5_RAT	Nudt5	ADP-sugar pyrophosphatase	1	VYAYALALK	VYAYALALK	2	VYAYALALK2	19739	13620	22708.8
P37136	P37136	ACES_RAT	Ache	Acetylcholinesterase	1	VYAYIFEHR	VYAYIFEHR	2	VYAYIFEHR2	17424.8	16623	10409.9
P37136	P37136	ACES_RAT	Ache	Acetylcholinesterase	1	VYAYIFEHR	VYAYIFEHR	3	VYAYIFEHR3	105551	109574	98184.5
Q03070	Q03070	CHIO_RAT	Chn2	Beta-chimaerin	1	VYCCDLTTLVK	VYC(UniMod:4)C(UniMod:4)DLTTLVK	2	VYC(UniMod:4)C(UniMod:4)DLTTLVK2	16038.9	8267.05	4154.28
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	VYCCDSSFMK	VYC(UniMod:4)C(UniMod:4)DSSFMK	2	VYC(UniMod:4)C(UniMod:4)DSSFMK2	35645.5	25912.9	26861.3
P02466	P02466	CO1A2_RAT	Col1a2	Collagen alpha-2(I) chain	1	VYCDFSTGETCIQAQPVNTPAK	VYC(UniMod:4)DFSTGETC(UniMod:4)IQAQPVNTPAK	3	VYC(UniMod:4)DFSTGETC(UniMod:4)IQAQPVNTPAK3	5643.25	11648.6	6443.35
P67874	P67874	CSK2B_RAT	Csnk2b	Casein kinase II subunit beta	1	VYCENQPMLPIGLSDIPGEAMVK	VYC(UniMod:4)ENQPMLPIGLSDIPGEAMVK	3	VYC(UniMod:4)ENQPMLPIGLSDIPGEAMVK3	14532.6		15805.1
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	VYCLEMR	VYC(UniMod:4)LEMR	2	VYC(UniMod:4)LEMR2	48719.2	52964.1	48306.6
F1LQ00	F1LQ00	F1LQ00_RAT	Col5a2	Collagen type V alpha 2 chain	1	VYCNLETGETCISANPASVPR	VYC(UniMod:4)NLETGETC(UniMod:4)ISANPASVPR	3	VYC(UniMod:4)NLETGETC(UniMod:4)ISANPASVPR3	8082.44	14928.5	9682.15
P02454	P02454	CO1A1_RAT	Col1a1	Collagen alpha-1(I) chain	1	VYCNMETGQTCVFPTQPSVPQK	VYC(UniMod:4)NMETGQTC(UniMod:4)VFPTQPSVPQK	3	VYC(UniMod:4)NMETGQTC(UniMod:4)VFPTQPSVPQK3	3626.44		3884.17
D3ZVC4	D3ZVC4	D3ZVC4_RAT	Arel1	Apoptosis resistant E3 ubiquitin protein ligase 1	1	VYCYVSPK	VYC(UniMod:4)YVSPK	2	VYC(UniMod:4)YVSPK2	4670.86	3975.7	6578.9
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	VYDEEVEDQALK	VYDEEVEDQALK	2	VYDEEVEDQALK2	20812.4	26493.1	24075
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VYDLHGSCSYVLAGVCR	VYDLHGSC(UniMod:4)SYVLAGVC(UniMod:4)R	2	VYDLHGSC(UniMod:4)SYVLAGVC(UniMod:4)R2	20643.3	24517.7	18867.3
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VYDLHGSCSYVLAGVCR	VYDLHGSC(UniMod:4)SYVLAGVC(UniMod:4)R	3	VYDLHGSC(UniMod:4)SYVLAGVC(UniMod:4)R3	1.19792e+06	1.21686e+06	1.2369e+06
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VYDLHGSCSYVLAGVCRPK	VYDLHGSC(UniMod:4)SYVLAGVC(UniMod:4)RPK	3	VYDLHGSC(UniMod:4)SYVLAGVC(UniMod:4)RPK3	5123.04		
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	VYDLHGSCSYVLAGVCRPK	VYDLHGSC(UniMod:4)SYVLAGVC(UniMod:4)RPK	4	VYDLHGSC(UniMod:4)SYVLAGVC(UniMod:4)RPK4	17421.9	8393.45	13336.9
Q5U2Q3	Q5U2Q3	CK054_RAT		Ester hydrolase C11orf54 homolog	1	VYDLNEIAK	VYDLNEIAK	2	VYDLNEIAK2	5860.2	3332.98	
A0A8I5Y1D5	A0A8I5Y1D5	A0A8I5Y1D5_RAT	Mtmr1	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	VYDPVSEYK	VYDPVSEYK	2	VYDPVSEYK2	13771.4	10223.3	
F7ELE5	F7ELE5	F7ELE5_RAT	Ndufs7	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial	1	VYDQMPEPR	VYDQMPEPR	2	VYDQMPEPR2	79568	61705.2	70614.6
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	VYDQTNPYPDVR	VYDQTNPYPDVR	2	VYDQTNPYPDVR2	44973.9	44531.6	42315.1
Q6MG56	Q6MG56	LY66F_RAT	Ly6g6f	Lymphocyte antigen 6 complex locus protein G6f	1	VYDVSVLK	VYDVSVLK	1	VYDVSVLK1	6102.1	3708.27	4116.92
Q6MG56	Q6MG56	LY66F_RAT	Ly6g6f	Lymphocyte antigen 6 complex locus protein G6f	1	VYDVSVLK	VYDVSVLK	2	VYDVSVLK2	2.11512e+06	2.01173e+06	2.21286e+06
Q03626	Q6IE52;Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	0	VYDYYETDEVAFAEYSSPCSSDK	VYDYYETDEVAFAEYSSPC(UniMod:4)SSDK	3	VYDYYETDEVAFAEYSSPC(UniMod:4)SSDK3	427182	273041	250447
Q91ZW1	Q91ZW1	TFAM_RAT	Tfam	Transcription factor A, mitochondrial	1	VYEADFK	VYEADFK	2	VYEADFK2	22890.9	12109.9	23792.8
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	VYEDPALSAIFLHNNYNYILK	VYEDPALSAIFLHNNYNYILK	3	VYEDPALSAIFLHNNYNYILK3	17315.4	8762.19	12942.7
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	VYEELLAIPVVR	VYEELLAIPVVR	2	VYEELLAIPVVR2	14723.4	11214.3	13568.8
A0A096MKE0	A0A096MKE0	A0A096MKE0_RAT	Asph	Aspartate-beta-hydroxylase	1	VYEEVLNVTPNDGFAK	VYEEVLNVTPNDGFAK	2	VYEEVLNVTPNDGFAK2		7161.39	5328.38
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	VYEFLDK	VYEFLDK	1	VYEFLDK1	1481.27	3564.8	3528.19
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	VYEFLDK	VYEFLDK	2	VYEFLDK2	252431	245605	248319
F7EXX5	F7EXX5	F7EXX5_RAT	Irf3	Interferon regulatory factor 3	1	VYEFVTPGGAR	VYEFVTPGGAR	2	VYEFVTPGGAR2	12563.5	10838.6	11143.1
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	VYEGERPLTK	VYEGERPLTK	2	VYEGERPLTK2	207836	160924	154635
P06761	P06761	BIP_RAT	Hspa5	Endoplasmic reticulum chaperone BiP	1	VYEGERPLTK	VYEGERPLTK	3	VYEGERPLTK3	5.33991e+06	4.81346e+06	5.70365e+06
P70470	P70470	LYPA1_RAT	Lypla1	Acyl-protein thioesterase 1	1	VYEGMMHSSCQQEMMDVK	VYEGMMHSSC(UniMod:4)QQEMMDVK	3	VYEGMMHSSC(UniMod:4)QQEMMDVK3	9754.29	6244.42	7643.73
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	VYEGSILEADCDILIPAASEK	VYEGSILEADC(UniMod:4)DILIPAASEK	3	VYEGSILEADC(UniMod:4)DILIPAASEK3	93969.4	96665	104551
P60570	P60570	PANX1_RAT	Panx1	Pannexin-1	1	VYEILPTFDVLHFK	VYEILPTFDVLHFK	2	VYEILPTFDVLHFK2	27527.7	47981.4	39123.1
P60570	P60570	PANX1_RAT	Panx1	Pannexin-1	1	VYEILPTFDVLHFK	VYEILPTFDVLHFK	3	VYEILPTFDVLHFK3	112881	47291.2	64704
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	VYEIQDIYENSWTK	VYEIQDIYENSWTK	2	VYEIQDIYENSWTK2	47169.9	57719.6	46416.5
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	VYEIYEFCR	VYEIYEFC(UniMod:4)R	2	VYEIYEFC(UniMod:4)R2	20804.7	20119.1	15170.7
D3ZL11	D3ZL11	D3ZL11_RAT	Rbsn	Rabenosyn, RAB effector	1	VYELIDALSK	VYELIDALSK	2	VYELIDALSK2	12301.8	9900.38	10846.7
P0C1S9	P0C1S9	DGLB_RAT	Daglb	Diacylglycerol lipase-beta	1	VYELPFIVVLDHR	VYELPFIVVLDHR	3	VYELPFIVVLDHR3	37618.8	36860.2	34804.7
P0C1S9	P0C1S9	DGLB_RAT	Daglb	Diacylglycerol lipase-beta	1	VYELPFIVVLDHRK	VYELPFIVVLDHRK	4	VYELPFIVVLDHRK4	5136.78	2056.22	1681.59
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	VYELQASR	VYELQASR	2	VYELQASR2	358202	435285	365953
D3ZHR2	D3ZHR2	ABCD1_RAT	Abcd1	ATP-binding cassette sub-family D member 1	1	VYEMFQVFEDVQHCR	VYEMFQVFEDVQHC(UniMod:4)R	3	VYEMFQVFEDVQHC(UniMod:4)R3	7159.36	1706.74	4174.98
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	VYEMQNTIQSLQMER	VYEMQNTIQSLQMER	2	VYEMQNTIQSLQMER2	6514.65	9400.48	9226.82
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	VYENVGLMQQQR	VYENVGLMQQQR	2	VYENVGLMQQQR2	155586	143721	162176
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	VYENVGLMQQQR	VYENVGLMQQQR	3	VYENVGLMQQQR3	20731	24711.6	26353
O35346	O35346	FAK1_RAT	Ptk2	Focal adhesion kinase 1	1	VYENVTGLVK	VYENVTGLVK	2	VYENVTGLVK2	10759.6	13210.5	9843.33
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	VYENYSFEELR	VYENYSFEELR	2	VYENYSFEELR2	14793.8	10729.2	19889.5
Q6AXM6	Q6AXM6	Q6AXM6_RAT	Icam2	Intercellular adhesion molecule 2	1	VYEPPAQVTLK	VYEPPAQVTLK	2	VYEPPAQVTLK2	97432.1	93672.1	94416.5
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	VYESAAVGSVVLQVTALDRDK	VYESAAVGSVVLQVTALDRDK	3	VYESAAVGSVVLQVTALDRDK3	5817.93	7013.95	15766.4
B4F7E7	B4F7E7	PALS1_RAT	Pals1	Protein PALS1	1	VYESIGHYGGETVK	VYESIGHYGGETVK	3	VYESIGHYGGETVK3	26908.2	15766.1	31176.1
P19234	P19234	NDUV2_RAT	Ndufv2	NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial	1	VYEVATFYTMYNR	VYEVATFYTMYNR	2	VYEVATFYTMYNR2	27121.7	33900.5	22737.3
P24368	P24368	PPIB_RAT	Ppib	Peptidyl-prolyl cis-trans isomerase B	1	VYFDFQIGDEPVGR	VYFDFQIGDEPVGR	2	VYFDFQIGDEPVGR2	71607	51242.8	57888.3
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	VYFIYEGYQGMVDGGSNIVEAK	VYFIYEGYQGMVDGGSNIVEAK	3	VYFIYEGYQGMVDGGSNIVEAK3	18081.3	26526.7	17393.3
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	VYFLMAETR	VYFLMAETR	2	VYFLMAETR2	52986	72717.3	56837.6
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	VYFLPITPHYVTQVIR	VYFLPITPHYVTQVIR	2	VYFLPITPHYVTQVIR2	4524.98	7280.27	
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	VYFLPITPHYVTQVIR	VYFLPITPHYVTQVIR	3	VYFLPITPHYVTQVIR3	19891.5	32745.5	30295.7
Q8K3F3	A0A8I6G618;Q8K3F3	PP14B_RAT	Ppp1r14b	Protein phosphatase 1 regulatory subunit 14B	0	VYFQSPPGAAGEGPGGADDDGPVR	VYFQSPPGAAGEGPGGADDDGPVR	3	VYFQSPPGAAGEGPGGADDDGPVR3	2709.37	2560.61	
Q8K3F3	A0A8I6G618;Q8K3F3	PP14B_RAT	Ppp1r14b	Protein phosphatase 1 regulatory subunit 14B	0	VYFQSPPGAAGEGPGGADDDGPVRR	VYFQSPPGAAGEGPGGADDDGPVRR	3	VYFQSPPGAAGEGPGGADDDGPVRR3	58918.7	49583.2	49811.8
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	VYFTYCGQR	VYFTYC(UniMod:4)GQR	2	VYFTYC(UniMod:4)GQR2	9187.58	12868.2	10967.7
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	VYFVNHNTR	VYFVNHNTR	2	VYFVNHNTR2	7411.3	11182.6	5488.66
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	VYFVNHNTR	VYFVNHNTR	3	VYFVNHNTR3	36559.6	45132.6	42174
Q4V8H8	Q4V8H8	EHD2_RAT	Ehd2	EH domain-containing protein 2	1	VYGALMWALGK	VYGALMWALGK	2	VYGALMWALGK2	5621.16		4386.73
Q8R491	Q8R491;Q641Z6;Q8R3Z7	EHD3_RAT	Ehd3	EH domain-containing protein 3	0	VYGALMWSLGK	VYGALMWSLGK	2	VYGALMWSLGK2	177316	133905	151507
B4F779	B4F779	DP13B_RAT	Appl2	DCC-interacting protein 13-beta	1	VYGAQNEMCLATQQLSR	VYGAQNEMC(UniMod:4)LATQQLSR	3	VYGAQNEMC(UniMod:4)LATQQLSR3	4617.15	2596.27	
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	VYGDENSDK	VYGDENSDK	2	VYGDENSDK2			37725
D3ZSB7	D3ZSB7	D3ZSB7_RAT	Rps6ka4	Ribosomal protein S6 kinase	1	VYGGEIVLALEHLHK	VYGGEIVLALEHLHK	4	VYGGEIVLALEHLHK4	2463.13		1120.18
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	VYGLYSVTNCK	VYGLYSVTNC(UniMod:4)K	2	VYGLYSVTNC(UniMod:4)K2	28385.5	38505.5	42829
D3ZEE4	D3ZEE4	D3ZEE4_RAT	Plxdc1	Plexin domain containing 1	1	VYGPGEQR	VYGPGEQR	2	VYGPGEQR2	134991	129506	119751
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VYGPGVAK	VYGPGVAK	1	VYGPGVAK1	123608	97430.1	91134.5
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	VYGPGVAK	VYGPGVAK	2	VYGPGVAK2	58375.5	1.25271e+07	1.36656e+07
P35435	P35435	ATPG_RAT	Atp5f1c	ATP synthase subunit gamma, mitochondrial	1	VYGTGSLALYEK	VYGTGSLALYEK	2	VYGTGSLALYEK2	344809	394155	354977
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	VYGYFPPNR	VYGYFPPNR	2	VYGYFPPNR2	108377	81004	160546
B2RYU6	B2RYU6	TPC2L_RAT	Trappc2l	Trafficking protein particle complex subunit 2-like protein	1	VYGYVTNSK	VYGYVTNSK	2	VYGYVTNSK2	47177.7	42384.2	56072.9
E9PU42	E9PU42	E9PU42_RAT	Vps26c	VPS26 endosomal protein sorting factor C	1	VYHAGEMLSGVVVISSK	VYHAGEMLSGVVVISSK	3	VYHAGEMLSGVVVISSK3	2890.65	1454.13	1532.48
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	VYHCNWLMPSQK	VYHC(UniMod:4)NWLMPSQK	2	VYHC(UniMod:4)NWLMPSQK2		3997.22	6523.66
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	VYHCNWLMPSQK	VYHC(UniMod:4)NWLMPSQK	3	VYHC(UniMod:4)NWLMPSQK3	17960.2	22772.7	33033.7
P59622	P59622	SLAP1_RAT	Sla	Src-like-adapter	1	VYHGWLFEGLGR	VYHGWLFEGLGR	3	VYHGWLFEGLGR3	14218.5	13882.2	16866.1
P22273	P22273	IL6RA_RAT	Il6r	Interleukin-6 receptor subunit alpha	1	VYHIVSLCVANSVGSR	VYHIVSLC(UniMod:4)VANSVGSR	3	VYHIVSLC(UniMod:4)VANSVGSR3	15221.1	6002.37	6603.73
Q6IE52	Q6IE52	MUG2_RAT	Mug2	Murinoglobulin-2	1	VYHKEENLCIHSSCTAER	VYHKEENLC(UniMod:4)IHSSC(UniMod:4)TAER	4	VYHKEENLC(UniMod:4)IHSSC(UniMod:4)TAER4	29051.2		26026
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	VYHKEESSCIHSSCTAER	VYHKEESSC(UniMod:4)IHSSC(UniMod:4)TAER	3	VYHKEESSC(UniMod:4)IHSSC(UniMod:4)TAER3			221625
P14046	Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	VYHKEESSCIHSSCTAER	VYHKEESSC(UniMod:4)IHSSC(UniMod:4)TAER	4	VYHKEESSC(UniMod:4)IHSSC(UniMod:4)TAER4			54004.6
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	VYHQLMGHRPQLENLLCK	VYHQLMGHRPQLENLLC(UniMod:4)K	3	VYHQLMGHRPQLENLLC(UniMod:4)K3		2981.83	2637.63
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	VYHQLMGHRPQLENLLCK	VYHQLMGHRPQLENLLC(UniMod:4)K	4	VYHQLMGHRPQLENLLC(UniMod:4)K4	16716	21727.6	9847.22
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	VYHVGMHIPGWFR	VYHVGMHIPGWFR	3	VYHVGMHIPGWFR3	14645.6	18010.4	18344.4
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	VYHVGMHIPGWFR	VYHVGMHIPGWFR	4	VYHVGMHIPGWFR4	36221.6	48245.4	36152.8
Q5U2N3	Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	1	VYHVGSHIPGWFR	VYHVGSHIPGWFR	4	VYHVGSHIPGWFR4	13993.4	14628	14195.2
P07867	P07867	LIPC_RAT	Lipc	Hepatic triacylglycerol lipase	1	VYHYQFK	VYHYQFK	2	VYHYQFK2	13761	15583.8	16218.6
Q8R3Z7	Q8R3Z7	Q8R3Z7_RAT	Ehd4	EH-domain containing 4	1	VYIGSFWAQPLQNTDNRR	VYIGSFWAQPLQNTDNRR	3	VYIGSFWAQPLQNTDNRR3	57745.4	45741.2	45639.7
Q8R491	Q8R491;Q641Z6	EHD3_RAT	Ehd3	EH domain-containing protein 3	0	VYIGSFWSHPLLIPDNR	VYIGSFWSHPLLIPDNR	3	VYIGSFWSHPLLIPDNR3	100104	77756.6	86996.2
Q8R491	Q8R491;Q641Z6	EHD3_RAT	Ehd3	EH domain-containing protein 3	0	VYIGSFWSHPLLIPDNRK	VYIGSFWSHPLLIPDNRK	3	VYIGSFWSHPLLIPDNRK3	29984.3	33038.6	
Q8R491	Q8R491;Q641Z6	EHD3_RAT	Ehd3	EH domain-containing protein 3	0	VYIGSFWSHPLLIPDNRK	VYIGSFWSHPLLIPDNRK	4	VYIGSFWSHPLLIPDNRK4	8334.04	27879.6	42294.3
P01015	P01015	ANGT_RAT	Agt	Angiotensinogen	1	VYIHPFHLLYYSK	VYIHPFHLLYYSK	2	VYIHPFHLLYYSK2	6364.27	5739.27	5225.52
P01015	P01015	ANGT_RAT	Agt	Angiotensinogen	1	VYIHPFHLLYYSK	VYIHPFHLLYYSK	3	VYIHPFHLLYYSK3	64947.1	58766.4	45374.2
P01015	P01015	ANGT_RAT	Agt	Angiotensinogen	1	VYIHPFHLLYYSK	VYIHPFHLLYYSK	4	VYIHPFHLLYYSK4	115247	104810	103399
M0RAX2	P52504;M0RAX2	M0RAX2_RAT	Ndufs6l1	NADH dehydrogenase (ubiquinone) Fe-S protein 6	0	VYINLDK	VYINLDK	2	VYINLDK2	47151.7	33439.3	43168.1
M0RAX2	P52504;M0RAX2	M0RAX2_RAT	Ndufs6l1	NADH dehydrogenase (ubiquinone) Fe-S protein 6	0	VYINLDKETK	VYINLDKETK	2	VYINLDKETK2	5250.36	7304.29	
M0RAX2	P52504;M0RAX2	M0RAX2_RAT	Ndufs6l1	NADH dehydrogenase (ubiquinone) Fe-S protein 6	0	VYINLDKETK	VYINLDKETK	3	VYINLDKETK3	12644.7	19492.4	14423.5
A0A8J8YRV3	A0A8J8YRV3	A0A8J8YRV3_RAT	Drg1	Developmentally regulated GTP binding protein 1	1	VYIPCIYVLNK	VYIPC(UniMod:4)IYVLNK	2	VYIPC(UniMod:4)IYVLNK2	31696.6	24524.3	27476.5
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	VYISELK	VYISELK	2	VYISELK2	33322.1	43229.7	27837.1
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	VYISSPHCSPAHNK	VYISSPHC(UniMod:4)SPAHNK	3	VYISSPHC(UniMod:4)SPAHNK3	18522.5	15952.2	12920.1
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	VYISSPHCSPAHNK	VYISSPHC(UniMod:4)SPAHNK	4	VYISSPHC(UniMod:4)SPAHNK4	46548.2	24428	43000.5
G3V6K3	G3V6K3	G3V6K3_RAT	Exosc7	Exosome component 7	1	VYIVHGVQEDLR	VYIVHGVQEDLR	3	VYIVHGVQEDLR3	50306.4	49004.2	
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	VYIYNGMHTTLGDVTGK	VYIYNGMHTTLGDVTGK	2	VYIYNGMHTTLGDVTGK2	15747.5	28125.4	23224.4
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	VYIYNGMHTTLGDVTGK	VYIYNGMHTTLGDVTGK	3	VYIYNGMHTTLGDVTGK3	1.78758e+06	1.1208e+06	872354
F1M775	F1M775	DIAP1_RAT	Diaph1	Protein diaphanous homolog 1	1	VYKPEVQLR	VYKPEVQLR	2	VYKPEVQLR2	26450.7	29248.3	15562.2
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	VYLAAITK	VYLAAITK	2	VYLAAITK2	68639.1	91773.8	68162.8
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	VYLAPDGTSSEYGSIPVDINK	VYLAPDGTSSEYGSIPVDINK	3	VYLAPDGTSSEYGSIPVDINK3	3187.94		8089.15
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	VYLAPDGTSSEYGSIPVDINKK	VYLAPDGTSSEYGSIPVDINKK	3	VYLAPDGTSSEYGSIPVDINKK3	64981.8	78859.5	75297.2
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	VYLATDDPALLK	VYLATDDPALLK	2	VYLATDDPALLK2	85537.4	71467.2	94486
F1M9D0	B5DF98;F1M9D0	F1M9D0_RAT	Map3k2	Mitogen activated protein kinase kinase kinase 2	0	VYLCYDVDTGR	VYLC(UniMod:4)YDVDTGR	2	VYLC(UniMod:4)YDVDTGR2	5193.2	5446.86	4168.21
D3ZZX1	D3ZZX1	I5P1_RAT	Inpp5a	Inositol polyphosphate-5-phosphatase A	1	VYLDENYK	VYLDENYK	2	VYLDENYK2	159672	146702	160167
Q6UPR8	Q6UPR8	ERMP1_RAT	Ermp1	Endoplasmic reticulum metallopeptidase 1	1	VYLEHITAIGPR	VYLEHITAIGPR	2	VYLEHITAIGPR2	3280.71	2841.71	
Q6UPR8	Q6UPR8	ERMP1_RAT	Ermp1	Endoplasmic reticulum metallopeptidase 1	1	VYLEHITAIGPR	VYLEHITAIGPR	3	VYLEHITAIGPR3	35823.6	35774.5	39769
O88902	O88902	PTN23_RAT	Ptpn23	Tyrosine-protein phosphatase non-receptor type 23 (Fragment)	1	VYLEQNLAAQDNVLR	VYLEQNLAAQDNVLR	2	VYLEQNLAAQDNVLR2	8486.18	4490.83	4647.34
O88902	O88902	PTN23_RAT	Ptpn23	Tyrosine-protein phosphatase non-receptor type 23 (Fragment)	1	VYLEQNLAAQDNVLR	VYLEQNLAAQDNVLR	3	VYLEQNLAAQDNVLR3	3533.71		
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	VYLFLQPK	VYLFLQPK	2	VYLFLQPK2	7.58449e+06	7.5466e+06	9.03703e+06
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	VYLFTITK	VYLFTITK	2	VYLFTITK2	611229	568076	637123
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	VYLGDIPLK	VYLGDIPLK	2	VYLGDIPLK2	27366	20217.4	18642
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	VYLGPGR	VYLGPGR	2	VYLGPGR2	109902	120741	110319
Q71RP1	Q71RP1	HPSE_RAT	Hpse	Heparanase	1	VYLHCTNVYHPR	VYLHC(UniMod:4)TNVYHPR	2	VYLHC(UniMod:4)TNVYHPR2	5501.85		2808.29
Q71RP1	Q71RP1	HPSE_RAT	Hpse	Heparanase	1	VYLHCTNVYHPR	VYLHC(UniMod:4)TNVYHPR	3	VYLHC(UniMod:4)TNVYHPR3	41187.5	28539.7	27695.3
Q71RP1	Q71RP1	HPSE_RAT	Hpse	Heparanase	1	VYLHCTNVYHPR	VYLHC(UniMod:4)TNVYHPR	4	VYLHC(UniMod:4)TNVYHPR4	107657	132925	139608
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	VYLHTLAESIGK	VYLHTLAESIGK	2	VYLHTLAESIGK2	20934.3	30800.1	18829.6
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	VYLHTLAESIGK	VYLHTLAESIGK	3	VYLHTLAESIGK3	236450	315498	267444
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	VYLIQGTQVYVFLTK	VYLIQGTQVYVFLTK	2	VYLIQGTQVYVFLTK2	124039	85976.6	122586
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	VYLIQGTQVYVFLTK	VYLIQGTQVYVFLTK	3	VYLIQGTQVYVFLTK3	60193.1	40507.2	63492.1
Q66H86	Q66H86	OLFL1_RAT	Olfml1	Olfactomedin-like protein 1	1	VYLLAGSR	VYLLAGSR	2	VYLLAGSR2	77681.4	76716.6	81026.1
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	VYLLDVQGNITQK	VYLLDVQGNITQK	2	VYLLDVQGNITQK2		3618.63	8341.59
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	VYLLPDGR	VYLLPDGR	2	VYLLPDGR2	5714.14	7061.19	
B2RYG6	A0A8I6A324;B2RYG6	OTUB1_RAT	Otub1	Ubiquitin thioesterase OTUB1	0	VYLLYRPGHYDILYK	VYLLYRPGHYDILYK	3	VYLLYRPGHYDILYK3	45024.4	36510.6	30096.4
B2RYG6	A0A8I6A324;B2RYG6	OTUB1_RAT	Otub1	Ubiquitin thioesterase OTUB1	0	VYLLYRPGHYDILYK	VYLLYRPGHYDILYK	4	VYLLYRPGHYDILYK4	101692	105031	107150
Q5FVL8	Q5FVL8	Q5FVL8_RAT	Abcb10	ATP binding cassette subfamily B member 10	1	VYLMQSSGQSIVNR	VYLMQSSGQSIVNR	2	VYLMQSSGQSIVNR2	6496.19	2916.09	4649.88
A0A0G2JZL1	A0A0G2JZL1	A0A0G2JZL1_RAT	AABR07065808.1	Ig-like domain-containing protein	1	VYLQMNTLR	VYLQMNTLR	2	VYLQMNTLR2	39605.4	30116.9	31017.2
Q5SGE0	Q5SGE0	LPPRC_RAT	Lrpprc	Leucine-rich PPR motif-containing protein, mitochondrial	1	VYLQNEYR	VYLQNEYR	2	VYLQNEYR2	13190.7	18886.8	16489.1
P97535	P97535	PLA1A_RAT	Pla1a	Phospholipase A1 member A	1	VYLQTTSSAPYCVHHSLVEFNLK	VYLQTTSSAPYC(UniMod:4)VHHSLVEFNLK	3	VYLQTTSSAPYC(UniMod:4)VHHSLVEFNLK3			12328.3
P97535	P97535	PLA1A_RAT	Pla1a	Phospholipase A1 member A	1	VYLQTTSSAPYCVHHSLVEFNLK	VYLQTTSSAPYC(UniMod:4)VHHSLVEFNLK	4	VYLQTTSSAPYC(UniMod:4)VHHSLVEFNLK4	94257.8	78245.4	110050
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	VYLSECK	VYLSEC(UniMod:4)K	1	VYLSEC(UniMod:4)K1	8301.88	5265.4	9822.55
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	VYLSECK	VYLSEC(UniMod:4)K	2	VYLSEC(UniMod:4)K2	1.43272e+06	1.2559e+06	1.3379e+06
Q7TNZ6	Q7TNZ6	STRAA_RAT	Strada	STE20-related kinase adapter protein alpha	1	VYLSGLR	VYLSGLR	2	VYLSGLR2	16911.3	10493.7	14710.9
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	VYLYTHLR	VYLYTHLR	2	VYLYTHLR2	21769.7	25698.4	17767.5
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	VYMLEGDTQVADVTTSR	VYMLEGDTQVADVTTSR	2	VYMLEGDTQVADVTTSR2	7919.34	8948.46	4402.9
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	VYMPCLYVYNK	VYMPC(UniMod:4)LYVYNK	2	VYMPC(UniMod:4)LYVYNK2	66255.4	78465.4	72576.7
A0A8I5YCH6	A0A8I5YCH6	A0A8I5YCH6_RAT	Aaas	Aladin WD repeat nucleoporin	1	VYNANSTIVPSLK	VYNANSTIVPSLK	2	VYNANSTIVPSLK2	4169.4	6577.45	3890.39
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	VYNEAGVTFT	VYNEAGVTFT	2	VYNEAGVTFT2	8208.59	10591.5	16872.7
Q6TUG0	Q6TUG0	DJB11_RAT	Dnajb11	DnaJ homolog subfamily B member 11	1	VYNGLQGY	VYNGLQGY	1	VYNGLQGY1	10162.5	13060.4	15247.5
Q6TUG0	Q6TUG0	DJB11_RAT	Dnajb11	DnaJ homolog subfamily B member 11	1	VYNGLQGY	VYNGLQGY	2	VYNGLQGY2		10066.9	6566.14
P29411	P29411	KAD3_RAT	Ak3	GTP:AMP phosphotransferase AK3, mitochondrial	1	VYNIEFNPPK	VYNIEFNPPK	2	VYNIEFNPPK2	45408.9	42663.6	33738.6
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	VYNIQIR	VYNIQIR	2	VYNIQIR2	856715	887553	887239
A0A0G2K490	A0A0G2K490	A0A0G2K490_RAT	Tnik	TRAF2 and NCK interacting kinase	1	VYNLINR	VYNLINR	2	VYNLINR2	102793	233461	281654
Q9JI85	Q9JI85	NUCB2_RAT	Nucb2	Nucleobindin-2	1	VYNPQNAEDDMIEMEEER	VYNPQNAEDDMIEMEEER	3	VYNPQNAEDDMIEMEEER3	28914.9	36848.1	32576.6
P20280	D3ZZH9;A0A8I6AWN1;D3ZQ96;P20280;D3ZPN7;A0A8I5ZVN3;F1LWH4;M0R5R7;D3ZPH0;D4A870;D3ZLH3;D4A7B4;A0A8I5Y0P1;D3Z9G3	RL21_RAT	Rpl21	Large ribosomal subunit protein eL21	0	VYNVTQHAVGIIVNK	VYNVTQHAVGIIVNK	3	VYNVTQHAVGIIVNK3	24644.9	14882.4	22294
D3ZHA0	D3ZHA0	FLNC_RAT	Flnc	Filamin-C	1	VYNVTYTVK	VYNVTYTVK	2	VYNVTYTVK2		3434.47	3135.69
P61354	P61354	RL27_RAT	Rpl27	Large ribosomal subunit protein eL27	1	VYNYNHLMPTR	VYNYNHLMPTR	2	VYNYNHLMPTR2	736.923		2262.25
P61354	P61354	RL27_RAT	Rpl27	Large ribosomal subunit protein eL27	1	VYNYNHLMPTR	VYNYNHLMPTR	3	VYNYNHLMPTR3	56497.3	74233	36991.5
Q10473	Q10473	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	1	VYPDSLPTTSVVIVFHNEAWSTLLR	VYPDSLPTTSVVIVFHNEAWSTLLR	3	VYPDSLPTTSVVIVFHNEAWSTLLR3	13768.8	10806.8	22151.8
A0A8I5ZKU9	A0A8I5ZKU9	A0A8I5ZKU9_RAT	Shmt1	Serine hydroxymethyltransferase	1	VYPDTGYINYDQLEENASLFHPK	VYPDTGYINYDQLEENASLFHPK	3	VYPDTGYINYDQLEENASLFHPK3	3503.15		4016.16
F1LU27	F1LU27	F1LU27_RAT	Focad	Focadhesin	1	VYPELQR	VYPELQR	2	VYPELQR2	28726	36021.3	25934.9
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	VYPSSLSK	VYPSSLSK	1	VYPSSLSK1			2971.95
P97536	P97536	CAND1_RAT	Cand1	Cullin-associated NEDD8-dissociated protein 1	1	VYPSSLSK	VYPSSLSK	2	VYPSSLSK2	589370	683243	604781
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	VYQGLYCVAIR	VYQGLYC(UniMod:4)VAIR	2	VYQGLYC(UniMod:4)VAIR2	28094.6	30271.6	28925.1
P29411	P29411	KAD3_RAT	Ak3	GTP:AMP phosphotransferase AK3, mitochondrial	1	VYQIDTVINLNVPFEVIK	VYQIDTVINLNVPFEVIK	3	VYQIDTVINLNVPFEVIK3	4457.84	2404.06	2259.73
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	VYQIELAPK	VYQIELAPK	2	VYQIELAPK2	99502.9	117562	105007
B5DEY9	B5DEY9	B5DEY9_RAT	Csgalnact1	Hexosyltransferase	1	VYQLETGLTR	VYQLETGLTR	2	VYQLETGLTR2	11888.9	8627	9868.95
Q6MG51	Q6MG51	CF047_RAT	G4	Uncharacterized protein C6orf47 homolog	1	VYQLGSK	VYQLGSK	2	VYQLGSK2	57774.7	74393.5	61334.2
D3ZJF8	D3ZJF8;F7EZQ4	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	0	VYQSGTR	VYQSGTR	2	VYQSGTR2			567451
F1M8L9	F1M8L9	F1M8L9_RAT	Rapgef1	Rap guanine nucleotide exchange factor 1	1	VYQSLANLIR	VYQSLANLIR	2	VYQSLANLIR2	831.49	2617.48	2398.99
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	VYQSLAVK	VYQSLAVK	2	VYQSLAVK2	103798	93847.9	92390.3
Q66HG9	Q66HG9	MAVS_RAT	Mavs	Mitochondrial antiviral-signaling protein	1	VYQSYLPPGASLHSLDPLQSPR	VYQSYLPPGASLHSLDPLQSPR	3	VYQSYLPPGASLHSLDPLQSPR3	278310	243199	213221
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	VYQTNYFASK	VYQTNYFASK	2	VYQTNYFASK2		7361.08	4208.6
Q4G064	Q4G064	COQ5_RAT	Coq5	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial	1	VYQVFQSVAR	VYQVFQSVAR	2	VYQVFQSVAR2	9793.19	21178.7	18535.9
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	VYQWEDPDSK	VYQWEDPDSK	2	VYQWEDPDSK2	19979	17828	15796.8
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	VYRDDIGR	VYRDDIGR	2	VYRDDIGR2	3515.2	4187.83	4971.51
P30337	P30337;A0A8I6AP97	CHIN_RAT	Chn1	N-chimaerin	0	VYSCDLTTLVK	VYSC(UniMod:4)DLTTLVK	2	VYSC(UniMod:4)DLTTLVK2		4777.99	
F1LSG7	F1LSG7	F1LSG7_RAT	Fgfr2	Fibroblast growth factor receptor	1	VYSDAQPHIQWIK	VYSDAQPHIQWIK	3	VYSDAQPHIQWIK3	13684.4		11451.2
Q498D6	F1LSN4;Q498D6	FGFR4_RAT	Fgfr4	Fibroblast growth factor receptor 4	0	VYSDAQPHIQWLK	VYSDAQPHIQWLK	3	VYSDAQPHIQWLK3		22926.5	
D4ABX6	D4ABX6	D4ABX6_RAT	Mmrn2	Multimerin 2	1	VYSDMDVIPEGR	VYSDMDVIPEGR	2	VYSDMDVIPEGR2	43653.8	44280.7	44467.7
Q04589	Q04589;A0A8I6A1Z2	FGFR1_RAT	Fgfr1	Fibroblast growth factor receptor 1	0	VYSDPQPHIQWLK	VYSDPQPHIQWLK	2	VYSDPQPHIQWLK2	15737	14653.6	15690.8
Q04589	Q04589;A0A8I6A1Z2	FGFR1_RAT	Fgfr1	Fibroblast growth factor receptor 1	0	VYSDPQPHIQWLK	VYSDPQPHIQWLK	3	VYSDPQPHIQWLK3	206192	189432	252480
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	VYSILGATLK	VYSILGATLK	2	VYSILGATLK2	151109	105631	122307
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	VYSILGATLKDEGK	VYSILGATLKDEGK	2	VYSILGATLKDEGK2	37279.1	41064.9	37490.6
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	VYSILGATLKDEGK	VYSILGATLKDEGK	3	VYSILGATLKDEGK3	484418	450762	423269
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	VYSIMGGSIDGLR	VYSIMGGSIDGLR	2	VYSIMGGSIDGLR2	47804.4	58860.3	61278.5
A0A0G2K0G9	A0A0G2K0G9	A0A0G2K0G9_RAT	Rin3	Ras and Rab interactor 3	1	VYSLEMMTR	VYSLEMMTR	2	VYSLEMMTR2	19084.8	20817.5	12726
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	VYSLFLDESR	VYSLFLDESR	2	VYSLFLDESR2	66420.5	69990.9	59314.9
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	VYSLIQSLTSQIR	VYSLIQSLTSQIR	2	VYSLIQSLTSQIR2	8276.47	7930.44	9601.33
A0A0G2K8J8	A0A0G2K8J8	A0A0G2K8J8_RAT	Fam120b	Family with sequence similarity 120B	1	VYSLLLEDWK	VYSLLLEDWK	2	VYSLLLEDWK2		8208.98	6157.12
P08650	P08650	CO5_RAT	C5	Complement C5	1	VYSLSDDLKPAK	VYSLSDDLKPAK	2	VYSLSDDLKPAK2	60628.5	39292.5	31679.3
P08650	P08650	CO5_RAT	C5	Complement C5	1	VYSLSDDLKPAK	VYSLSDDLKPAK	3	VYSLSDDLKPAK3	1.11157e+06	898911	852109
P08650	P08650	CO5_RAT	C5	Complement C5	1	VYSLSDDLKPAKR	VYSLSDDLKPAKR	3	VYSLSDDLKPAKR3	40320.3	22801.7	33463.9
Q8R492	Q8R492	Q8R492_RAT	Fap	Fibroblast activation protein, alpha	1	VYSPEGNTGR	VYSPEGNTGR	2	VYSPEGNTGR2	17250.4	16674.3	12842.9
P39052	P39052;Q08877	DYN2_RAT	Dnm2	Dynamin-2	0	VYSPHVLNLTLIDLPGITK	VYSPHVLNLTLIDLPGITK	3	VYSPHVLNLTLIDLPGITK3	33621.1	22262.5	25434.6
G3V6U3	G3V6U3	G3V6U3_RAT	Alg2	Alpha-1,3/1,6-mannosyltransferase ALG2	1	VYSPSVLFLHPDMGIGGAER	VYSPSVLFLHPDMGIGGAER	3	VYSPSVLFLHPDMGIGGAER3	126066	141041	116597
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VYSQEFEAYNTK	VYSQEFEAYNTK	2	VYSQEFEAYNTK2	1.61253e+06	2.01326e+06	2.11912e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VYSQEFEAYNTK	VYSQEFEAYNTK	3	VYSQEFEAYNTK3	110899	149761	129772
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VYSQEFEAYNTKDK	VYSQEFEAYNTKDK	2	VYSQEFEAYNTKDK2		3921.41	
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	VYSQEFEAYNTKDK	VYSQEFEAYNTKDK	3	VYSQEFEAYNTKDK3	43748.8	66565.9	27585.4
Q5XFW4	Q5XFW4	Q5XFW4_RAT	Mrpl13	Mitochondrial ribosomal protein L13	1	VYSSHTGYPGGFR	VYSSHTGYPGGFR	3	VYSSHTGYPGGFR3	5852.52		2054.97
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	VYSSLLSDEK	VYSSLLSDEK	2	VYSSLLSDEK2	16995.4	18683.7	14912
B2RZ27	B2RZ27	SH3L3_RAT	Sh3bgrl3	SH3 domain-binding glutamic acid-rich-like protein 3	1	VYSTSVTGSR	VYSTSVTGSR	2	VYSTSVTGSR2	288400	255611	366089
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	VYSVNNVSVITK	VYSVNNVSVITK	2	VYSVNNVSVITK2	27108	46697.5	34286.8
P01026	P01026	CO3_RAT	C3	Complement C3	1	VYSYYNLEESCTR	VYSYYNLEESC(UniMod:4)TR	2	VYSYYNLEESC(UniMod:4)TR2	737242	735355	708484
P01026	P01026	CO3_RAT	C3	Complement C3	1	VYSYYNLEESCTR	VYSYYNLEESC(UniMod:4)TR	3	VYSYYNLEESC(UniMod:4)TR3	193561	197716	207877
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	VYTCEIYPVSAVGK	VYTC(UniMod:4)EIYPVSAVGK	2	VYTC(UniMod:4)EIYPVSAVGK2	11450.5	10073.9	10496.7
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	VYTDVNTHRPR	VYTDVNTHRPR	3	VYTDVNTHRPR3		201903	191732
D3ZSG2	D3ZSG2	D3ZSG2_RAT	Trank1	Tetratricopeptide repeat and ankyrin repeat containing 1	1	VYTEIIR	VYTEIIR	2	VYTEIIR2	16729.9	27539.7	33929.8
D3ZJ32	D3ZJ32	D3ZJ32_RAT	Esyt2	Extended synaptotagmin 2	1	VYTENVDK	VYTENVDK	2	VYTENVDK2	12763.3	16901.8	20626.9
P11505	Q64542;Q64568;P11505;P11506	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	0	VYTFNSVR	VYTFNSVR	2	VYTFNSVR2	37749.1	68707.1	58074.2
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	VYTGEMGR	VYTGEMGR	2	VYTGEMGR2	65494.1	105693	92726.1
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	VYTIMYSCWHEK	VYTIMYSC(UniMod:4)WHEK	2	VYTIMYSC(UniMod:4)WHEK2	3875	2624.98	10481.1
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	VYTIMYSCWHEK	VYTIMYSC(UniMod:4)WHEK	3	VYTIMYSC(UniMod:4)WHEK3	39953.4	45542.4	51110.7
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	VYTIRPYFPK	VYTIRPYFPK	3	VYTIRPYFPK3	55419.5	87018.6	78531.4
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	VYTITPLLSDNR	VYTITPLLSDNR	2	VYTITPLLSDNR2	94616.2	96723.3	98386.2
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	VYTITPLLSDNR	VYTITPLLSDNR	3	VYTITPLLSDNR3	6258.95	5899.63	3619.39
P29066	P29066	ARRB1_RAT	Arrb1	Beta-arrestin-1	1	VYTLTPFLANNR	VYTLTPFLANNR	2	VYTLTPFLANNR2	5911.51	7018.02	11825.3
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	VYTPHDGK	VYTPHDGK	2	VYTPHDGK2	33115.9		52647.3
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	VYTPVGK	VYTPVGK	2	VYTPVGK2	32974.4	34383.4	27288.6
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	VYTSNQEFETVR	VYTSNQEFETVR	2	VYTSNQEFETVR2	12003.7	16318.5	15963.2
P28840	P28840	NEC1_RAT	Pcsk1	Neuroendocrine convertase 1	1	VYTSYNTVQNDR	VYTSYNTVQNDR	2	VYTSYNTVQNDR2	1375.36	1456.02	2625.78
P28840	P28840	NEC1_RAT	Pcsk1	Neuroendocrine convertase 1	1	VYTSYNTVQNDRR	VYTSYNTVQNDRR	3	VYTSYNTVQNDRR3	7371.11		15344.4
A0A8I5XWD7	A0A8I5XWD7;P0C644	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	0	VYTVGPDYAHAEAR	VYTVGPDYAHAEAR	2	VYTVGPDYAHAEAR2	1605.57		2814.94
A0A8I5XWD7	A0A8I5XWD7;P0C644	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	0	VYTVGPDYAHAEAR	VYTVGPDYAHAEAR	3	VYTVGPDYAHAEAR3	63605.7	93058.3	71830.9
P62744	P62744	AP2S1_RAT	Ap2s1	AP-2 complex subunit sigma	1	VYTVVDEMFLAGEIR	VYTVVDEMFLAGEIR	2	VYTVVDEMFLAGEIR2	12358.5	7800.45	4131.33
D4ADE5	D4ADE5	D4ADE5_RAT	Setd7	Histone-lysine N-methyltransferase SETD7	1	VYVADSLISSAGEGLFSK	VYVADSLISSAGEGLFSK	2	VYVADSLISSAGEGLFSK2	5705.52		1300.64
F1LUU1	F1LUU1	F1LUU1_RAT	Itga11	Integrin subunit alpha 11	1	VYVAGAPR	VYVAGAPR	2	VYVAGAPR2	16701.4	18340.8	25424.1
A0A8I6AF61	A0A8I6AF61	A0A8I6AF61_RAT	Dusp3	Dual specificity protein phosphatase	1	VYVGNASVAQDITQLQK	VYVGNASVAQDITQLQK	2	VYVGNASVAQDITQLQK2	730.175	4765.38	4388.41
A0A8I5ZSN8;A0A8I6A2P1	A0A8I5ZSN8;A0A8I6A2P1	A0A8I5ZSN8_RAT;A0A8I6A2P1_RAT	AABR07026797.1;Srsf3	RRM domain-containing protein	0	VYVGNLGNNGNK	VYVGNLGNNGNK	2	VYVGNLGNNGNK2	14992.9	14220.1	12488.9
A0A8I6AFZ5	A0A8I6AFZ5	A0A8I6AFZ5_RAT	Srsf7	Serine and arginine rich splicing factor 7	1	VYVGNLGTGAGK	VYVGNLGTGAGK	2	VYVGNLGTGAGK2	35994.2	58133.3	48897.1
P80067	P80067	CATC_RAT	Ctsc	Dipeptidyl peptidase 1	1	VYVNVAHLGGLQEK	VYVNVAHLGGLQEK	3	VYVNVAHLGGLQEK3	5644.72	5933.52	
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	VYVQHLLK	VYVQHLLK	2	VYVQHLLK2	7756.28	10887.8	8236.91
Q7TP48	Q7TP48	APMAP_RAT	Apmap	Adipocyte plasma membrane-associated protein	1	VYVSGLMK	VYVSGLMK	2	VYVSGLMK2	101408	72412.5	110452
P29066	P15887;P29066	ARRB1_RAT	Arrb1	Beta-arrestin-1	0	VYVTLTCAFR	VYVTLTC(UniMod:4)AFR	2	VYVTLTC(UniMod:4)AFR2	28446.8	17196.6	22263.6
D4A5K6	D4A5K6	D4A5K6_RAT	Zmpste24	CAAX prenyl protease	1	VYVVEGSK	VYVVEGSK	2	VYVVEGSK2	196256	205733	202154
F1LUU1	F1LUU1	F1LUU1_RAT	Itga11	Integrin subunit alpha 11	1	VYVYNLR	VYVYNLR	2	VYVYNLR2	27614.2	29141.9	30412.1
G3V901	G3V901	G3V901_RAT	Ext1	Exostosin glycosyltransferase 1	1	VYVYPQQK	VYVYPQQK	2	VYVYPQQK2	8183.51	5458.63	9009.3
F7FLB2	F7FLB2	F7FLB2_RAT	Pgm2	phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	1	VYWDNGAQIISPHDR	VYWDNGAQIISPHDR	3	VYWDNGAQIISPHDR3	9062.98	8100.86	3316.97
P98166	P98166	VLDLR_RAT	Vldlr	Very low-density lipoprotein receptor	1	VYWIDGENEAVYGANK	VYWIDGENEAVYGANK	2	VYWIDGENEAVYGANK2	9444.84	13375.2	10156.2
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	VYWSDVR	VYWSDVR	2	VYWSDVR2	424793	513979	423966
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	VYWTDVLNEAIFSANR	VYWTDVLNEAIFSANR	2	VYWTDVLNEAIFSANR2	22021.7	28260.1	22409.6
P35952	P35952	LDLR_RAT	Ldlr	Low-density lipoprotein receptor	1	VYWTDVLNEAIFSANR	VYWTDVLNEAIFSANR	3	VYWTDVLNEAIFSANR3	34372.6	35671.9	39998.9
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	VYWTNWHTGTISYR	VYWTNWHTGTISYR	2	VYWTNWHTGTISYR2	3042.57	3783.96	4379.13
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	VYWTNWHTGTISYR	VYWTNWHTGTISYR	3	VYWTNWHTGTISYR3	98425	153401	125975
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	VYWVEESTAR	VYWVEESTAR	2	VYWVEESTAR2	12630.2	21074.2	
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	VYYDISSAK	VYYDISSAK	2	VYYDISSAK2	207882	216962	217787
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	VYYDLTR	VYYDLTR	2	VYYDLTR2	292582	270975	299488
E9PU03	E9PU03	E9PU03_RAT	Smg5	Nonsense-mediated mRNA decay factor	1	VYYEVIQLIK	VYYEVIQLIK	2	VYYEVIQLIK2	6220.34	8349.4	3691.75
D3ZHQ1	D3ZHQ1	D3ZHQ1_RAT	Dpp8	Dipeptidylpeptidase 8	1	VYYLAMSGENR	VYYLAMSGENR	2	VYYLAMSGENR2	11101.7	21347	7184.75
F1LP90	A0A0G2K490;A0A8I5ZLV4;F1LP90	MINK1_RAT	Mink1	Misshapen-like kinase 1	0	VYYLSWLR	VYYLSWLR	2	VYYLSWLR2	165994	175233	183904
Q499T5	Q499T5	Q499T5_RAT	Capn7	Calpain 7	1	VYYPADPAPYIDGIR	VYYPADPAPYIDGIR	2	VYYPADPAPYIDGIR2	5142.18	6050.53	3995.46
G3V985	G3V985	G3V985_RAT	Sco1	Synthesis of cytochrome C oxidase 1	1	VYYSPGPK	VYYSPGPK	2	VYYSPGPK2	17641.8	29428.3	29237.1
Q64605	Q64605	PTPRS_RAT	Ptprs	Receptor-type tyrosine-protein phosphatase S	1	VYYTMEPEHPVGNWQK	VYYTMEPEHPVGNWQK	3	VYYTMEPEHPVGNWQK3	4437.69	2637.59	
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	VYYTPDSR	VYYTPDSR	2	VYYTPDSR2	18271.7	16318	18249
B4F767	B4F767	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	1	VYYVDHNTK	VYYVDHNTK	2	VYYVDHNTK2	4662.48	4501.83	3972.89
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	VYYVDHVEK	VYYVDHVEK	2	VYYVDHVEK2	6987.9	2878.22	4785.28
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	VYYVDHVEK	VYYVDHVEK	3	VYYVDHVEK3	35511.7	49815.4	29233.8
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	VYYVDHVEKR	VYYVDHVEKR	3	VYYVDHVEKR3	12466.3	17888.9	18867.3
B4F767	B4F767	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	1	VYYVNHNTR	VYYVNHNTR	2	VYYVNHNTR2	5058.02	3698.17	4885.9
B4F767	B4F767	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	1	VYYVNHNTR	VYYVNHNTR	3	VYYVNHNTR3	52257.7	54280.6	54573.3
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	WAAELAELYSYTEGPEFLMNR	WAAELAELYSYTEGPEFLMNR	3	WAAELAELYSYTEGPEFLMNR3	5753.21	4758.3	3310.8
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	WAAELAELYSYTEGPEFLMNRK	WAAELAELYSYTEGPEFLMNRK	3	WAAELAELYSYTEGPEFLMNRK3	10670.4	8903.95	8066.35
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	WAAETPELK	WAAETPELK	2	WAAETPELK2	172220	139302	138267
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	WAAETPELKEDPQSR	WAAETPELKEDPQSR	3	WAAETPELKEDPQSR3	20606.4	26310.9	14701.6
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	WAAETPELKEDPQSRPSGK	WAAETPELKEDPQSRPSGK	3	WAAETPELKEDPQSRPSGK3	12538.6	6143.7	16001.7
Q66HF9	Q66HF9	LRRF1_RAT	Lrrfip1	Leucine-rich repeat flightless-interacting protein 1	1	WAAETPELKEDPQSRPSGK	WAAETPELKEDPQSRPSGK	4	WAAETPELKEDPQSRPSGK4	17836.7	20423	23158.3
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	WAAQTIR	WAAQTIR	2	WAAQTIR2	359260	422128	344113
A0A0G2K4S5	A0A0G2K4S5	A0A0G2K4S5_RAT	RT1-CE1	RT1 class Ia, locus A2	1	WAAVVVPLGK	WAAVVVPLGK	2	WAAVVVPLGK2	72914.8	73478.4	92563.2
F1LQF2	F1LQF2	F1LQF2_RAT	RT1-S3	RT1 class Ib, locus S3	1	WAAVVVPSGEELK	WAAVVVPSGEELK	2	WAAVVVPSGEELK2		6762.04	6482.26
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	WACPPGMNSGFELGVR	WAC(UniMod:4)PPGMNSGFELGVR	2	WAC(UniMod:4)PPGMNSGFELGVR2	70101.8	42112.4	56809
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	WACPPGMNSGFELGVR	WAC(UniMod:4)PPGMNSGFELGVR	3	WAC(UniMod:4)PPGMNSGFELGVR3	25480.9	27073.1	22813.5
A0A8I5ZMX2	A0A8I5ZMX2	A0A8I5ZMX2_RAT	Adamts3	ADAM metallopeptidase with thrombospondin type 1, motif 3	1	WACQQQK	WAC(UniMod:4)QQQK	2	WAC(UniMod:4)QQQK2	8920.1	8498.94	
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	WADFPGLQQLLLK	WADFPGLQQLLLK	2	WADFPGLQQLLLK2	16417.5	17334.9	15218.2
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	WADHLCSPQVNQK	WADHLC(UniMod:4)SPQVNQK	3	WADHLC(UniMod:4)SPQVNQK3	6028.46	3294.65	7173.2
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	WAEDNEVQNCMSCGK	WAEDNEVQNC(UniMod:4)MSC(UniMod:4)GK	2	WAEDNEVQNC(UniMod:4)MSC(UniMod:4)GK2	2518.72	1401.22	
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	WAEGTGPLELLAER	WAEGTGPLELLAER	2	WAEGTGPLELLAER2	3876.12		5532.79
Q99N37	Q99N37	RHG17_RAT	Arhgap17	Rho GTPase-activating protein 17	1	WAEKPAFGTPLEEHLK	WAEKPAFGTPLEEHLK	4	WAEKPAFGTPLEEHLK4	5962.65	4236.91	3613.3
Q99N37	Q99N37	RHG17_RAT	Arhgap17	Rho GTPase-activating protein 17	1	WAEKPAFGTPLEEHLKR	WAEKPAFGTPLEEHLKR	4	WAEKPAFGTPLEEHLKR4	4660.75	7561.39	5257.58
Q76HN1	Q76HN1	HYAL1_RAT	Hyal1	Hyaluronidase-1	1	WAFNWDSK	WAFNWDSK	2	WAFNWDSK2	10412.5	10627.4	8619.76
D3ZFJ6	D3ZFJ6	D3ZFJ6_RAT	Lactb	Lactamase, beta	1	WAGGGFLSTVGDLLK	WAGGGFLSTVGDLLK	2	WAGGGFLSTVGDLLK2	3580.38	5221.37	3977.93
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	WAGVSLDQSALLPLR	WAGVSLDQSALLPLR	2	WAGVSLDQSALLPLR2	23584.4	22157.9	22395.4
P0C1S9	P0C1S9	DGLB_RAT	Daglb	Diacylglycerol lipase-beta	1	WAHETEFSK	WAHETEFSK	2	WAHETEFSK2	28592.8	14914.9	15156.9
A0A8I6AT07	A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	1	WAHFPAEDQDYLGGLLTKPIVK	WAHFPAEDQDYLGGLLTKPIVK	3	WAHFPAEDQDYLGGLLTKPIVK3	1573.22	1149.5	1068.79
A0A8I6AT07	A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	1	WAHFPAEDQDYLGGLLTKPIVK	WAHFPAEDQDYLGGLLTKPIVK	4	WAHFPAEDQDYLGGLLTKPIVK4	7360.23	5997.35	12074.9
Q68FS4	A0A8I6B0E2;Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	0	WAHLDIAGVMTNK	WAHLDIAGVMTNK	3	WAHLDIAGVMTNK3	5165.99	6757.19	6890.46
Q68FS4	Q68FS4	AMPL_RAT	Lap3	Cytosol aminopeptidase	1	WAHLDIAGVMTNKDEIPYLR	WAHLDIAGVMTNKDEIPYLR	4	WAHLDIAGVMTNKDEIPYLR4	11099.3		10996.7
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	WAHQALVTPADHPLLPLIWQK	WAHQALVTPADHPLLPLIWQK	4	WAHQALVTPADHPLLPLIWQK4	16977.6	8744.24	7148.25
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	WAIAQLNYADMLK	WAIAQLNYADMLK	2	WAIAQLNYADMLK2	141948	154603	149349
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	WAIAQLNYADMLKR	WAIAQLNYADMLKR	3	WAIAQLNYADMLKR3	9011.72	13175.5	13861.8
D4A0W1	D4A0W1	D4A0W1_RAT	Emc4	ER membrane protein complex subunit 4	1	WAIELSGPGGGSR	WAIELSGPGGGSR	2	WAIELSGPGGGSR2	54490	66393.7	66817
P11662	P11662	NU2M_RAT	mt-Nd2	NADH-ubiquinone oxidoreductase chain 2	1	WAIISELLK	WAIISELLK	2	WAIISELLK2	13281	8007.81	8937.83
P36370	P36370	TAP1_RAT	Tap1	Antigen peptide transporter 1	1	WAILGLGVR	WAILGLGVR	2	WAILGLGVR2	25189.5	20126.7	18724.9
D4ACK7	D4ACK7	D4ACK7_RAT	Cnnm3	Metal transporter	1	WALALAPR	WALALAPR	2	WALALAPR2	6811.61		4302.84
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	WALDALR	WALDALR	2	WALDALR2	156980	151416	143765
P26342	P26342	TGBR3_RAT	Tgfbr3	Transforming growth factor beta receptor type 3	1	WALDNGYRPVTSYTMAPVANR	WALDNGYRPVTSYTMAPVANR	3	WALDNGYRPVTSYTMAPVANR3	2881.82		
P0CAX5	P0CAX5	OPHN1_RAT	Ophn1	Oligophrenin-1	1	WALGISWVK	WALGISWVK	2	WALGISWVK2	23246.9	24170.1	25833.1
Q09325	Q09325	MGAT1_RAT	Mgat1	Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	1	WALGQIFNK	WALGQIFNK	2	WALGQIFNK2	12889.9	9901.07	12611.3
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	WALHILAR	WALHILAR	2	WALHILAR2	4688.47	2817.05	2331.59
Q5I0D1	Q5I0D1	GLOD4_RAT	Glod4	Glyoxalase domain-containing protein 4	1	WALLGYADDQCK	WALLGYADDQC(UniMod:4)K	2	WALLGYADDQC(UniMod:4)K2		5793.49	2688.07
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	WALSQSNPSALR	WALSQSNPSALR	2	WALSQSNPSALR2	2.03513e+06	1.98704e+06	2.12893e+06
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	WALSQSNPSALR	WALSQSNPSALR	3	WALSQSNPSALR3	8147.51	7976.74	
P63074	P63074;A0A8I6G664	IF4E_RAT	Eif4e	Eukaryotic translation initiation factor 4E	0	WALWFFK	WALWFFK	2	WALWFFK2	28422.2	18968.1	24313
Q6ZXC8	Q6ZXC8	SIA8E_RAT	St8sia5	Alpha-2,8-sialyltransferase 8E	1	WAMDASEASLFK	WAMDASEASLFK	2	WAMDASEASLFK2	1488.66	2581.86	7110.23
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	WAMLEQIR	WAMLEQIR	2	WAMLEQIR2	25226	14529.3	19081.7
Q63598	Q63598	PLST_RAT	Pls3	Plastin-3	1	WANFHLENSGWQK	WANFHLENSGWQK	3	WANFHLENSGWQK3	1024.13		
F7EZW5	F7EZW5	F7EZW5_RAT	Tmem161a	Transmembrane protein 161A	1	WANSLHDEKPLSVPR	WANSLHDEKPLSVPR	3	WANSLHDEKPLSVPR3	4336.51	3593.55	3635.66
F7EZW5	F7EZW5	F7EZW5_RAT	Tmem161a	Transmembrane protein 161A	1	WANSLHDEKPLSVPR	WANSLHDEKPLSVPR	4	WANSLHDEKPLSVPR4	52614.7	84048.8	79109.1
Q6AXM8	Q6AXM8	PON2_RAT	Pon2	Serum paraoxonase/arylesterase 2	1	WANVVYYSPEEVK	WANVVYYSPEEVK	2	WANVVYYSPEEVK2	21089.7	25635	22625.7
P41243	P41243	MATK_RAT	Matk	Megakaryocyte-associated tyrosine-protein kinase	1	WAPGTQCMTK	WAPGTQC(UniMod:4)MTK	2	WAPGTQC(UniMod:4)MTK2	60174.7	40820.8	40970.8
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	WAPTVTK	WAPTVTK	2	WAPTVTK2	31429.1	39568.6	40145.6
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	WAQFFIHPLMIR	WAQFFIHPLMIR	3	WAQFFIHPLMIR3	29941	24750.4	27266.9
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	WAQPDPMAQAGFYHQPASSGDDR	WAQPDPMAQAGFYHQPASSGDDR	3	WAQPDPMAQAGFYHQPASSGDDR3	22625.9	24523.7	24735.9
Q5CD77	Q5CD77	TBC14_RAT	Tbc1d14	TBC1 domain family member 14	1	WAQVLSALQK	WAQVLSALQK	2	WAQVLSALQK2		2363.84	3960.37
M0R3L8	M0R3L8	M0R3L8_RAT	Gba	Glucosylceramidase	1	WAQVVLSDPEAAK	WAQVVLSDPEAAK	2	WAQVVLSDPEAAK2	35887	20534.2	30632.3
P84092	P84092	AP2M1_RAT	Ap2m1	AP-2 complex subunit mu	1	WARPPISMNFEVPFAPSGLK	WARPPISMNFEVPFAPSGLK	3	WARPPISMNFEVPFAPSGLK3	99757.6	104475	119323
D3ZTE0	D3ZTE0	FA12_RAT	F12	Coagulation factor XII	1	WASEATYR	WASEATYR	2	WASEATYR2	257911	282732	267270
D3ZFQ8	D3ZFQ8	D3ZFQ8_RAT	Cyc1	Cytochrome c-1	1	WASEPEHDHR	WASEPEHDHR	2	WASEPEHDHR2	9897.71		11024.8
D3ZFQ8	D3ZFQ8	D3ZFQ8_RAT	Cyc1	Cytochrome c-1	1	WASEPEHDHR	WASEPEHDHR	3	WASEPEHDHR3	22553.9		31632.7
D3ZFQ8	D3ZFQ8	D3ZFQ8_RAT	Cyc1	Cytochrome c-1	1	WASEPEHDHRK	WASEPEHDHRK	2	WASEPEHDHRK2			4075.34
D3ZFQ8	D3ZFQ8	D3ZFQ8_RAT	Cyc1	Cytochrome c-1	1	WASEPEHDHRK	WASEPEHDHRK	3	WASEPEHDHRK3			18054.8
P52555	P52555	ERP29_RAT	Erp29	Endoplasmic reticulum resident protein 29	1	WASQYLK	WASQYLK	2	WASQYLK2	33086.1	20514.5	29805.9
P49806	P49806	RGS10_RAT	Rgs10	Regulator of G-protein signaling 10	1	WASSLENLLEDPEGVK	WASSLENLLEDPEGVK	2	WASSLENLLEDPEGVK2		8446.62	9107.98
P49806	P49806	RGS10_RAT	Rgs10	Regulator of G-protein signaling 10	1	WASSLENLLEDPEGVKR	WASSLENLLEDPEGVKR	3	WASSLENLLEDPEGVKR3	16116.6	43350.7	19382.3
P15978	A0A8J8YPS9;A0A0G2K881;P16391;Q4G002;E9PTZ7;A0A8J8XQ64;A0A8J8XB15;P15978	HA11_RAT	RT1-Aw2	Class I histocompatibility antigen, Non-RT1.A alpha-1 chain	0	WASVVVPLGK	WASVVVPLGK	2	WASVVVPLGK2	636657	662423	719333
Q6AYB2	Q6AYB2	Q6AYB2_RAT	Sphk2	Sphingosine kinase 2	1	WATALMCLLR	WATALMC(UniMod:4)LLR	2	WATALMC(UniMod:4)LLR2	26659.8	17747.6	20743.9
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	WATLTELMPSAELK	WATLTELMPSAELK	2	WATLTELMPSAELK2	16769.7	10698.9	15777.4
Q8K4C0	Q8K4C0	FMO5_RAT	Fmo5	Flavin-containing monooxygenase 5	1	WATQVFK	WATQVFK	2	WATQVFK2	6982.31	17744.9	
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	WATVTFHLPHHVLK	WATVTFHLPHHVLK	4	WATVTFHLPHHVLK4	5609.47		7343.63
Q4V8B7	Q4V8B7	HSDL1_RAT	Hsdl1	Inactive hydroxysteroid dehydrogenase-like protein 1	1	WAVISGATDGIGK	WAVISGATDGIGK	2	WAVISGATDGIGK2	222358	289511	226381
G3V6U9	G3V6U9	SETD3_RAT	Setd3	Actin-histidine N-methyltransferase	1	WAVSSVMTR	WAVSSVMTR	2	WAVSSVMTR2	51757.2	30086.2	31190.9
Q6MG59	Q6MG59	G6B_RAT	Mpig6b	Megakaryocyte and platelet inhibitory receptor G6b	1	WAWAPSFPACK	WAWAPSFPAC(UniMod:4)K	2	WAWAPSFPAC(UniMod:4)K2	1.62706e+06	1.66738e+06	1.93021e+06
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	WCALSHQER	WC(UniMod:4)ALSHQER	2	WC(UniMod:4)ALSHQER2	650005	623836	638772
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	WCALSHQER	WC(UniMod:4)ALSHQER	3	WC(UniMod:4)ALSHQER3	12265.8	17214.6	1.24092e+06
P50282	P50282	MMP9_RAT	Mmp9	Matrix metalloproteinase-9	1	WCATTANYDQDK	WC(UniMod:4)ATTANYDQDK	2	WC(UniMod:4)ATTANYDQDK2	9479.82	8654.09	8978.58
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	WCATTHNYDR	WC(UniMod:4)ATTHNYDR	2	WC(UniMod:4)ATTHNYDR2	6810.37	2879.57	
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	WCATTHNYDR	WC(UniMod:4)ATTHNYDR	3	WC(UniMod:4)ATTHNYDR3	76250.8	69449	58826.3
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	WCATTHNYDRDR	WC(UniMod:4)ATTHNYDRDR	3	WC(UniMod:4)ATTHNYDRDR3	178550	209911	133861
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	WCATTHNYDRDR	WC(UniMod:4)ATTHNYDRDR	4	WC(UniMod:4)ATTHNYDRDR4	238564	311144	239308
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	WCAVGQQER	WC(UniMod:4)AVGQQER	2	WC(UniMod:4)AVGQQER2	248147	231289	240908
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	WCAVSEHENTK	WC(UniMod:4)AVSEHENTK	2	WC(UniMod:4)AVSEHENTK2	441383	512060	410544
P12346	P12346	TRFE_RAT	Tf	Serotransferrin	1	WCAVSEHENTK	WC(UniMod:4)AVSEHENTK	3	WC(UniMod:4)AVSEHENTK3	2.46411e+06	2.51833e+06	2.607e+06
Q6AZ83	Q6AZ83	G6PC3_RAT	G6pc3	Glucose-6-phosphatase 3	1	WCDRPEWVLVDSR	WC(UniMod:4)DRPEWVLVDSR	3	WC(UniMod:4)DRPEWVLVDSR3	36667.5	31168.8	27300
Q6AZ83	Q6AZ83	G6PC3_RAT	G6pc3	Glucose-6-phosphatase 3	1	WCDRPEWVLVDSRPFASLSR	WC(UniMod:4)DRPEWVLVDSRPFASLSR	3	WC(UniMod:4)DRPEWVLVDSRPFASLSR3	17220.7	19459.9	12613.4
Q6AZ83	Q6AZ83	G6PC3_RAT	G6pc3	Glucose-6-phosphatase 3	1	WCDRPEWVLVDSRPFASLSR	WC(UniMod:4)DRPEWVLVDSRPFASLSR	4	WC(UniMod:4)DRPEWVLVDSRPFASLSR4	158364	163095	164675
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	WCEESSVKPPWHLGVDPPFR	WC(UniMod:4)EESSVKPPWHLGVDPPFR	4	WC(UniMod:4)EESSVKPPWHLGVDPPFR4	34164.5	23023.4	53685.5
P81155	P81155	VDAC2_RAT	Vdac2	Voltage-dependent anion-selective channel protein 2	1	WCEYGLTFTEK	WC(UniMod:4)EYGLTFTEK	2	WC(UniMod:4)EYGLTFTEK2	150058	165488	169018
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	WCGDPALLNSLK	WC(UniMod:4)GDPALLNSLK	2	WC(UniMod:4)GDPALLNSLK2	39505.7	47521	38287.1
Q9EQX6	Q9EQX6	PDGFC_RAT	Pdgfc	Platelet-derived growth factor C	1	WCGSGTVPGK	WC(UniMod:4)GSGTVPGK	2	WC(UniMod:4)GSGTVPGK2	64256.4	70371.9	81906.9
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	WCGTTQNYDADQK	WC(UniMod:4)GTTQNYDADQK	2	WC(UniMod:4)GTTQNYDADQK2	91946.9	96407.9	72500.2
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	WCGTTQNYDADQK	WC(UniMod:4)GTTQNYDADQK	3	WC(UniMod:4)GTTQNYDADQK3	1.78055e+06	2.42244e+06	2.49466e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	WCHDNGVNYK	WC(UniMod:4)HDNGVNYK	2	WC(UniMod:4)HDNGVNYK2	3.94322e+06	3.64051e+06	2.72147e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	WCHDNGVNYK	WC(UniMod:4)HDNGVNYK	3	WC(UniMod:4)HDNGVNYK3	7.52158e+06	9.12901e+06	6.25746e+06
A0A8I6ANR6	A0A8I6ANR6	A0A8I6ANR6_RAT	Chuk	IkappaB kinase	1	WCHEIQIMK	WC(UniMod:4)HEIQIMK	3	WC(UniMod:4)HEIQIMK3	3892.97	5011.13	4244.75
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	WCHMTQEER	WC(UniMod:4)HMTQEER	2	WC(UniMod:4)HMTQEER2	9908	8870.13	6451.61
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	WCHMTQEER	WC(UniMod:4)HMTQEER	3	WC(UniMod:4)HMTQEER3	19802.7	16223.7	31306.5
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	WCHMTQEERDDSLR	WC(UniMod:4)HMTQEERDDSLR	3	WC(UniMod:4)HMTQEERDDSLR3	36303.6	28134.9	20953.1
D4A3C2	D4A3C2	D4A3C2_RAT	RGD1304884	Similar to RIKEN cDNA 6430548M08	1	WCHMTQEERDDSLR	WC(UniMod:4)HMTQEERDDSLR	4	WC(UniMod:4)HMTQEERDDSLR4	32297.7	23185.1	40184.1
Q64350	Q64350	EI2BE_RAT	Eif2b5	Translation initiation factor eIF-2B subunit epsilon	1	WCHPTSLNVVR	WC(UniMod:4)HPTSLNVVR	2	WC(UniMod:4)HPTSLNVVR2	10598.8	7115.06	3946.27
Q64350	Q64350	EI2BE_RAT	Eif2b5	Translation initiation factor eIF-2B subunit epsilon	1	WCHPTSLNVVR	WC(UniMod:4)HPTSLNVVR	3	WC(UniMod:4)HPTSLNVVR3	39551.7	37388.8	32198.3
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	WCIVSDHEATK	WC(UniMod:4)IVSDHEATK	2	WC(UniMod:4)IVSDHEATK2	34577.2	21320.4	20487.7
A0A8I6AEF9	A0A8I6AEF9	A0A8I6AEF9_RAT	Inhca	Similar to RIKEN cDNA 1300017J02	1	WCIVSDHEATK	WC(UniMod:4)IVSDHEATK	3	WC(UniMod:4)IVSDHEATK3	104214	107775	111508
D3ZZL3	D3ZZL3	D3ZZL3_RAT	Naglu	N-acetyl-alpha-glucosaminidase	1	WCLFLGTLAHSLAR	WC(UniMod:4)LFLGTLAHSLAR	3	WC(UniMod:4)LFLGTLAHSLAR3	7225.38	1654.35	2829.65
D3ZHA0	D3ZHA0;A0A0G2JXT8;A0A8I5ZV49	FLNC_RAT	Flnc	Filamin-C	0	WCNEHLK	WC(UniMod:4)NEHLK	2	WC(UniMod:4)NEHLK2	755572	529066	705649
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	WCPAPDCHHVVK	WC(UniMod:4)PAPDC(UniMod:4)HHVVK	2	WC(UniMod:4)PAPDC(UniMod:4)HHVVK2	4501.9	4131.38	7521.5
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	WCPAPDCHHVVK	WC(UniMod:4)PAPDC(UniMod:4)HHVVK	3	WC(UniMod:4)PAPDC(UniMod:4)HHVVK3	34951.8	41305.8	49284.5
A0A0G2JSI4	A0A0G2JSI4	A0A0G2JSI4_RAT	Adgre5	Adhesion G protein-coupled receptor E5	1	WCPPNSECESNR	WC(UniMod:4)PPNSEC(UniMod:4)ESNR	2	WC(UniMod:4)PPNSEC(UniMod:4)ESNR2	733855	805172	763573
A0A0G2JSI4	A0A0G2JSI4	A0A0G2JSI4_RAT	Adgre5	Adhesion G protein-coupled receptor E5	1	WCPPNSECESNR	WC(UniMod:4)PPNSEC(UniMod:4)ESNR	3	WC(UniMod:4)PPNSEC(UniMod:4)ESNR3	16872.3	22009.4	14507.6
D4A731	D4A731	D4A731_RAT	Ankib1	RBR-type E3 ubiquitin transferase	1	WCPTAGCER	WC(UniMod:4)PTAGC(UniMod:4)ER	2	WC(UniMod:4)PTAGC(UniMod:4)ER2	19926.6	25170.2	20328.1
D3ZKG7	D3ZKG7	D3ZKG7_RAT	Inpp5f	Inositol polyphosphate-5-phosphatase F	1	WCWVDQAGVICK	WC(UniMod:4)WVDQAGVIC(UniMod:4)K	2	WC(UniMod:4)WVDQAGVIC(UniMod:4)K2	55163.4	77881.9	54329.1
Q66H15	Q66H15	RMD3_RAT	Rmdn3	Regulator of microtubule dynamics protein 3	1	WCYQVSHLSWLEK	WC(UniMod:4)YQVSHLSWLEK	3	WC(UniMod:4)YQVSHLSWLEK3	14531.2	10734	14794.1
Q5FVN0	Q5FVN0	MBOA5_RAT	Lpcat3	Lysophospholipid acyltransferase 5	1	WDACANMK	WDAC(UniMod:4)ANMK	2	WDAC(UniMod:4)ANMK2	46822.7	38481.2	33338.6
Q80X08	Q80X08	WASC2_RAT	Washc2	WASH complex subunit 2	1	WDAGTNQGQEAK	WDAGTNQGQEAK	2	WDAGTNQGQEAK2	9047.4	11636.3	10946.8
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	WDAPDDELDNDSSSAR	WDAPDDELDNDSSSAR	2	WDAPDDELDNDSSSAR2	45234	68718.6	62355
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	WDAPDDELDNDSSSAR	WDAPDDELDNDSSSAR	3	WDAPDDELDNDSSSAR3	5489.66	9129.55	3277.15
F7FMS0	F7FMS0	F7FMS0_RAT	Mst1	Macrophage stimulating 1	1	WDAQNPHQHR	WDAQNPHQHR	2	WDAQNPHQHR2	4936.09		
Q8R4Z9	Q8R4Z9	MFN1_RAT	Mfn1	Mitofusin-1	1	WDASASEPEYMEDVRR	WDASASEPEYMEDVRR	3	WDASASEPEYMEDVRR3		3799.46	2551.81
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	WDASASEPEYMEEVR	WDASASEPEYMEEVR	2	WDASASEPEYMEEVR2	7562.86	7589.28	10367.2
Q8R500	Q8R500	MFN2_RAT	Mfn2	Mitofusin-2	1	WDASASEPEYMEEVRR	WDASASEPEYMEEVRR	3	WDASASEPEYMEEVRR3	17397.2	12292.7	15124.8
Q5XIC0	Q5XIC0	ECI2_RAT	Eci2	Enoyl-CoA delta isomerase 2	1	WDAWNALGSLPK	WDAWNALGSLPK	2	WDAWNALGSLPK2	24882.2	23020.5	34541.1
Q6DGF9	Q6DGF9	ACBD4_RAT	Acbd4	Acyl-CoA-binding domain-containing protein 4	1	WDAWNSLGK	WDAWNSLGK	2	WDAWNSLGK2		2883.07	3236.42
A0FKI7	A0FKI7;A0A8I5Y5I3	ACBD5_RAT	Acbd5	Acyl-CoA-binding domain-containing protein 5	0	WDAWSSLGDMTK	WDAWSSLGDMTK	2	WDAWSSLGDMTK2	4197.21	3388.4	
Q4QQV2	Q4QQV2	DOK1_RAT	Dok1	Docking protein 1	1	WDCGLSR	WDC(UniMod:4)GLSR	2	WDC(UniMod:4)GLSR2	46598.3	45821.1	58088.8
A0A1W2Q642	A0A1W2Q642	A0A1W2Q642_RAT	Pi16	Peptidase inhibitor 16	1	WDDELAAFAK	WDDELAAFAK	2	WDDELAAFAK2	2.44886e+06	2.73097e+06	2.62227e+06
Q9WTQ2	Q9WTQ2	PODXL_RAT	Podxl	Podocalyxin	1	WDDLTEAGVIDIHLGK	WDDLTEAGVIDIHLGK	2	WDDLTEAGVIDIHLGK2	7627.47	8618.63	8877.3
Q9WTQ2	Q9WTQ2	PODXL_RAT	Podxl	Podocalyxin	1	WDDLTEAGVIDIHLGK	WDDLTEAGVIDIHLGK	3	WDDLTEAGVIDIHLGK3	44834.9	36110.4	44417.8
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	WDDPYYDIAR	WDDPYYDIAR	2	WDDPYYDIAR2	150539	144781	128385
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	WDEANAEK	WDEANAEK	2	WDEANAEK2	59657.1	33411	56054.8
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	WDEEWDKNK	WDEEWDKNK	2	WDEEWDKNK2	9090.46	3713.61	5309.01
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	WDEEWDKNK	WDEEWDKNK	3	WDEEWDKNK3	73501	75440.3	80292.9
D4A0Z1	D4A0Z1	D4A0Z1_RAT	Tspan14	Tetraspanin	1	WDEFIFTK	WDEFIFTK	2	WDEFIFTK2	46291.8	64094.4	44295.3
P50411	F7F907;P50411	IPP2_RAT	Ppp1r2	Protein phosphatase inhibitor 2	0	WDEMNILATYHPADK	WDEMNILATYHPADK	3	WDEMNILATYHPADK3	32327	27671.5	33429.6
P50411	P50411	IPP2_RAT	Ppp1r2	Protein phosphatase inhibitor 2	1	WDEMNILATYHPADKDYGLMK	WDEMNILATYHPADKDYGLMK	4	WDEMNILATYHPADKDYGLMK4	7495.87	5390.63	3065.36
A0A8I6A6I4	A0A8I6A6I4	A0A8I6A6I4_RAT	Atp11b	Phospholipid-transporting ATPase	1	WDEPWYNQK	WDEPWYNQK	2	WDEPWYNQK2	4560.78	4960.75	5691.57
D4A5S6	D4A5S6	D4A5S6_RAT	Alg1	ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase	1	WDESWQQTVLPLLVTHK	WDESWQQTVLPLLVTHK	3	WDESWQQTVLPLLVTHK3	5981.5	5853.17	1330.89
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	WDFMRPIVLK	WDFMRPIVLK	3	WDFMRPIVLK3	9909.36	10254.9	11685.4
Q642B4	Q642B4	Q642B4_RAT	Clec14a	C-type lectin domain containing 14A	1	WDGLFPGSLLCPCSGR	WDGLFPGSLLC(UniMod:4)PC(UniMod:4)SGR	2	WDGLFPGSLLC(UniMod:4)PC(UniMod:4)SGR2	31036.8	27236.4	31870.5
D3ZD11	D3ZD11	D3ZD11_RAT	Spcs2	Signal peptidase complex subunit 2	1	WDGSAVK	WDGSAVK	2	WDGSAVK2	163338	169029	196391
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	WDGVPFILR	WDGVPFILR	2	WDGVPFILR2	22149.5	14588	16342.7
P48032	P48032	TIMP3_RAT	Timp3	Metalloproteinase inhibitor 3	1	WDHLTLSQR	WDHLTLSQR	2	WDHLTLSQR2	194028	103133	179217
P48032	P48032	TIMP3_RAT	Timp3	Metalloproteinase inhibitor 3	1	WDHLTLSQR	WDHLTLSQR	3	WDHLTLSQR3	1.04586e+06	1.17707e+06	1.14137e+06
D4AD37	D4AD37	IMPA3_RAT	Bpnt2	Golgi-resident adenosine 3',5'-bisphosphate 3'-phosphatase	1	WDICAGNAILK	WDIC(UniMod:4)AGNAILK	2	WDIC(UniMod:4)AGNAILK2	21273.2	25188.7	36752.1
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	WDKDNLQILR	WDKDNLQILR	3	WDKDNLQILR3	48372.3	49750.3	44487.1
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	WDLGLNK	WDLGLNK	2	WDLGLNK2	14653.6	7019.52	17358.6
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	WDLGNLLLFNGAK	WDLGNLLLFNGAK	2	WDLGNLLLFNGAK2	3122.51	2448.9	932.315
P24155	P24155	THOP1_RAT	Thop1	Thimet oligopeptidase	1	WDLSAQQIR	WDLSAQQIR	2	WDLSAQQIR2	4661.39	13783.6	7787.46
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	WDLSPEQIK	WDLSPEQIK	2	WDLSPEQIK2	5532.46	9788.4	10026.3
A0A8I6ARV9	A0A8I6ARV9	A0A8I6ARV9_RAT	Ctsa	Carboxypeptidase	1	WDMCNLMVNLQYR	WDMC(UniMod:4)NLMVNLQYR	2	WDMC(UniMod:4)NLMVNLQYR2	14563.6	23838.2	13687.2
A0A8I6ARV9	A0A8I6ARV9	A0A8I6ARV9_RAT	Ctsa	Carboxypeptidase	1	WDMCNLMVNLQYR	WDMC(UniMod:4)NLMVNLQYR	3	WDMC(UniMod:4)NLMVNLQYR3	12763.7	3972.35	13081
Q5U2R9	Q5U2R9	Q5U2R9_RAT	Scfd2	Sec1 family domain containing 2	1	WDNFLAFER	WDNFLAFER	2	WDNFLAFER2	7170.85	9163.67	4720.08
P21913	P21913	SDHB_RAT	Sdhb	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial	1	WDPDKAGDKPR	WDPDKAGDKPR	2	WDPDKAGDKPR2	4417.92	4296.47	7010.46
P21913	P21913	SDHB_RAT	Sdhb	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial	1	WDPDKAGDKPR	WDPDKAGDKPR	3	WDPDKAGDKPR3	55400.6	37729.2	36948.4
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	WDPEPNCTR	WDPEPNC(UniMod:4)TR	2	WDPEPNC(UniMod:4)TR2	29312.7	22334	23072.5
A0A0G2K975	A0A0G2K975	A0A0G2K975_RAT	Cfhr4	Similar to complement factor H-related protein	1	WDPEPTCTR	WDPEPTC(UniMod:4)TR	2	WDPEPTC(UniMod:4)TR2	39272	22878.2	30385.1
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	WDPHLTR	WDPHLTR	2	WDPHLTR2	19830.6	12525.6	22324
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	WDQGLEKPR	WDQGLEKPR	2	WDQGLEKPR2	17699.2	17016.3	19781.7
Q63965	Q63965	SFXN1_RAT	Sfxn1	Sideroflexin-1	1	WDQSTFIGR	WDQSTFIGR	2	WDQSTFIGR2	243177	225476	239413
B0BNH1	B0BNH1	B0BNH1_RAT	Gnptg	N-acetylglucosamine-1-phosphate transferase subunit gamma	1	WDQVEQDLADELITPQGYEK	WDQVEQDLADELITPQGYEK	3	WDQVEQDLADELITPQGYEK3	58838.1	26185.5	27070.1
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	WDRQGENGQR	WDRQGENGQR	2	WDRQGENGQR2			5005
Q5RJK6	Q5RJK6	Q5RJK6_RAT	Inpp1	Inositol polyphosphate-1-phosphatase	1	WDSCAAHAILR	WDSC(UniMod:4)AAHAILR	3	WDSC(UniMod:4)AAHAILR3	14438.6	8682.13	5780.97
O08654	O08654	PHAF1_RAT	Phaf1	Phagosome assembly factor 1	1	WDSIQELLGHPVEKPVVLHR	WDSIQELLGHPVEKPVVLHR	4	WDSIQELLGHPVEKPVVLHR4	5179.08		1896.61
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	WDSLVQR	WDSLVQR	2	WDSLVQR2	204834	257721	214854
A0A0G2K6T9	A0A0G2K6T9	A0A0G2K6T9_RAT	Pcdh1	Protocadherin 1	1	WDSYDLTIK	WDSYDLTIK	2	WDSYDLTIK2	14132.1	19845.5	12590.6
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	WDTANNPLYK	WDTANNPLYK	2	WDTANNPLYK2	5.79399e+06	5.40666e+06	6.91922e+06
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	WDTANNPLYKEATSTFTNITYRGT	WDTANNPLYKEATSTFTNITYRGT	3	WDTANNPLYKEATSTFTNITYRGT3	12349.5	13264.6	14891.6
P49134	P49134	ITB1_RAT	Itgb1	Integrin beta-1	1	WDTGENPIYK	WDTGENPIYK	2	WDTGENPIYK2	702795	666074	795141
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	WDTVCGK	WDTVC(UniMod:4)GK	2	WDTVC(UniMod:4)GK2	35512.7	50659.5	42650
A0A0G2K516	A0A0G2K516	A0A0G2K516_RAT	Stx11	Syntaxin 11	1	WDVFSENLLADVK	WDVFSENLLADVK	2	WDVFSENLLADVK2	161775	126492	126469
A0A0G2K516	A0A0G2K516	A0A0G2K516_RAT	Stx11	Syntaxin 11	1	WDVFSENLLADVK	WDVFSENLLADVK	3	WDVFSENLLADVK3	10076.1		9321.07
A0A0G2K8R3	A0A0G2K8R3	A0A0G2K8R3_RAT	Lmo7	LIM domain 7	1	WDVSGISVASVEK	WDVSGISVASVEK	2	WDVSGISVASVEK2	4814.9	2665.81	8882.41
D3ZIK0	D3ZIK0	D3ZIK0_RAT	Glce	heparosan-N-sulfate-glucuronate 5-epimerase	1	WDYHTTHINQLQLLSTIDESPIFK	WDYHTTHINQLQLLSTIDESPIFK	4	WDYHTTHINQLQLLSTIDESPIFK4	10274.2	6833.08	3134.98
Q6AYK6	Q6AYK6	CYBP_RAT	Cacybp	Calcyclin-binding protein	1	WDYLTQVEK	WDYLTQVEK	2	WDYLTQVEK2	72776	61170.9	70204.7
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	WDYMTPEQR	WDYMTPEQR	2	WDYMTPEQR2	95681.8	95226.6	101624
D4A3M8	D4A3M8	D4A3M8_RAT	Nck2	Cytoplasmic protein	1	WDYTAQQDQELDIRK	WDYTAQQDQELDIRK	3	WDYTAQQDQELDIRK3	35816.6	32630.3	42790.4
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	WEAFCTDSLGEANK	WEAFC(UniMod:4)TDSLGEANK	2	WEAFC(UniMod:4)TDSLGEANK2		7862.13	4961.72
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	WEAFCTDSLGEANKR	WEAFC(UniMod:4)TDSLGEANKR	3	WEAFC(UniMod:4)TDSLGEANKR3	18646.7	31429.7	16834.1
Q8R492	Q8R492	Q8R492_RAT	Fap	Fibroblast activation protein, alpha	1	WEAIYIFR	WEAIYIFR	2	WEAIYIFR2	5775.34	5834.91	3303.69
D3ZL85	D3ZL85	D3ZL85_RAT	Hccs	Holocytochrome c-type synthase	1	WEALHAHECPCGPSLVR	WEALHAHEC(UniMod:4)PC(UniMod:4)GPSLVR	4	WEALHAHEC(UniMod:4)PC(UniMod:4)GPSLVR4	10127.4	7117.12	10201.9
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	WEALRVESMER	WEALRVESMER	3	WEALRVESMER3	19738.4	28081.4	24061.6
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	WECVSSILQVGGTIIGSAR	WEC(UniMod:4)VSSILQVGGTIIGSAR	3	WEC(UniMod:4)VSSILQVGGTIIGSAR3	10360.7	7311.4	8902.8
A0A8I6A678	A0A8I6A678	A0A8I6A678_RAT	Snx2	Sorting nexin-2	1	WEDAQITLLK	WEDAQITLLK	2	WEDAQITLLK2	16260.5	21381.4	15759.6
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	WEDDLKK	WEDDLKK	2	WEDDLKK2	16368.9	12528.7	14584.4
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	WEDRWEWLR	WEDRWEWLR	3	WEDRWEWLR3	145306	178029	173995
Q80ZF4	Q80ZF4	Q80ZF4_RAT	Mapkapk2	non-specific serine/threonine protein kinase	1	WEDVKEEMTSALATMR	WEDVKEEMTSALATMR	3	WEDVKEEMTSALATMR3	4953.19	5116.62	8737.21
P30349	P30349	LKHA4_RAT	Lta4h	Leukotriene A-4 hydrolase	1	WEEAIPLALK	WEEAIPLALK	2	WEEAIPLALK2	5493.35	10156.1	4099.13
A0A8I6A4W2	A0A8I6A4W2	A0A8I6A4W2_RAT	Ktn1	Kinectin 1	1	WEEVQSYIR	WEEVQSYIR	2	WEEVQSYIR2	10231.5	8902.55	21300.8
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	WEFIPSK	WEFIPSK	2	WEFIPSK2	50334	38620.2	40998.1
A0A8I5ZL63	A0A8I5ZL63	A0A8I5ZL63_RAT	Ankrd13a	Ankyrin repeat domain 13a	1	WEFTSWVPLVSR	WEFTSWVPLVSR	2	WEFTSWVPLVSR2	18680.9	23309	20538.4
Q5QE80	Q9Z0U5;Q5QE80	AOXC_RAT	Aox3	Aldehyde oxidase 3	0	WEFVSAFR	WEFVSAFR	2	WEFVSAFR2	4184.87	5480.13	7129.82
D3ZVM5	D3ZVM5	D3ZVM5_RAT	Hspa12b	Heat shock protein family A (Hsp70) member 12B	1	WEGGDPGVAHQK	WEGGDPGVAHQK	3	WEGGDPGVAHQK3	5395.36	6911.37	2879.53
A0A0G2K7M4	A0A0G2K7M4	A0A0G2K7M4_RAT	Apobr	Apolipoprotein B receptor	1	WEGGLAPDMELGK	WEGGLAPDMELGK	2	WEGGLAPDMELGK2	39694.1	35409.6	29750.4
Q6UPE1	Q6UPE1	ETFD_RAT	Etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1	WEGVNMER	WEGVNMER	2	WEGVNMER2	23723.8	20061.3	15723.4
A0A8I6ANS1	A0A8I6ANS1	A0A8I6ANS1_RAT	H6pd	Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	1	WEGVPFILMSGK	WEGVPFILMSGK	2	WEGVPFILMSGK2	10677.6	12303.3	8875.67
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	WEHEAVLIDVDGSLTGHR	WEHEAVLIDVDGSLTGHR	3	WEHEAVLIDVDGSLTGHR3	11952.6	7779.25	3773.87
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	WEHEAVLIDVDGSLTGHR	WEHEAVLIDVDGSLTGHR	4	WEHEAVLIDVDGSLTGHR4	10908.6	16338.6	6804.48
P33436	P33436	MMP2_RAT	Mmp2	72 kDa type IV collagenase	1	WEHGDGYPFDGK	WEHGDGYPFDGK	3	WEHGDGYPFDGK3	21608	11076.6	11175.5
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	WEHITTLISSLR	WEHITTLISSLR	2	WEHITTLISSLR2		3779.46	
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	WEHITTLISSLR	WEHITTLISSLR	3	WEHITTLISSLR3	39176.4	35494.7	46220.4
B3DMA2	B3DMA2	ACD11_RAT	Acad11	Acyl-CoA dehydrogenase family member 11	1	WEHPLVIEK	WEHPLVIEK	3	WEHPLVIEK3	15387.8	16967.7	23271.1
Q6IMF3	Q6IMF3	K2C1_RAT	Krt1	Keratin, type II cytoskeletal 1	1	WELLQQVDTSTR	WELLQQVDTSTR	2	WELLQQVDTSTR2	1.91339e+06	113498	1.666e+06
Q6IMF3	Q6IMF3	K2C1_RAT	Krt1	Keratin, type II cytoskeletal 1	1	WELLQQVDTSTR	WELLQQVDTSTR	3	WELLQQVDTSTR3	70207.8	71679.6	66364.9
Q5XHY5	Q5XHY5	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	1	WELNPGDGAFYGPK	WELNPGDGAFYGPK	2	WELNPGDGAFYGPK2	11486.5	21020.9	23070.2
Q8VIJ5	Q8VIJ5	OGA_RAT	Oga	Protein O-GlcNAcase	1	WELNTYLYAPK	WELNTYLYAPK	2	WELNTYLYAPK2	15136.4	22011.2	17029.7
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	WEMNILIK	WEMNILIK	2	WEMNILIK2	20387.4	15383.5	11971.8
A0A0G2KAU4	A0A0G2KAU4	A0A0G2KAU4_RAT	Rasgrp3	RAS guanyl releasing protein 3	1	WENEKPTLHAGVDVVDR	WENEKPTLHAGVDVVDR	4	WENEKPTLHAGVDVVDR4	5139.74	5297.62	9783.75
F7FH41	F7FH41	F7FH41_RAT	Csnk2a2	Casein kinase 2 alpha 2	1	WENFIHSENR	WENFIHSENR	3	WENFIHSENR3	8674.33	14495.5	6701.71
P68182	P68182	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	1	WENPPPSNAGLEDFER	WENPPPSNAGLEDFER	2	WENPPPSNAGLEDFER2	101441	94219.3	110274
P68182	P68182	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	1	WENPPPSNAGLEDFER	WENPPPSNAGLEDFER	3	WENPPPSNAGLEDFER3	9060.05	6359.52	13080.9
P68182	P68182	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	1	WENPPPSNAGLEDFERK	WENPPPSNAGLEDFERK	3	WENPPPSNAGLEDFERK3		10233.4	7181.91
A0A8I6AD03	A0A8I6AD03	A0A8I6AD03_RAT	Aplp1	Amyloid beta precursor like protein 1	1	WEPDPQR	WEPDPQR	2	WEPDPQR2	70387.8	75891.1	82834.2
P15943	P15943	APLP2_RAT	Aplp2	Amyloid beta precursor like protein 2	1	WEPDPTGTK	WEPDPTGTK	2	WEPDPTGTK2	45315	48080.7	50274.4
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	WEPQLPSCFK	WEPQLPSC(UniMod:4)FK	2	WEPQLPSC(UniMod:4)FK2	326810	450081	475731
A0A0G2KAE6	A0A0G2KAE6	A0A0G2KAE6_RAT	Miga2	Mitoguardin 2	1	WEQALSVGQR	WEQALSVGQR	2	WEQALSVGQR2		6579.88	
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	WEQDYHLQPMGR	WEQDYHLQPMGR	2	WEQDYHLQPMGR2	10122.1	9332.88	10153.9
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	WEQDYHLQPMGR	WEQDYHLQPMGR	3	WEQDYHLQPMGR3	156338	168076	168211
O08730	O08730	GLYG_RAT	Gyg1	Glycogenin-1	1	WEQGQADYMGADSFDNIKR	WEQGQADYMGADSFDNIKR	3	WEQGQADYMGADSFDNIKR3	7589.81	7912.44	3835.17
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	WEQIEGNSK	WEQIEGNSK	2	WEQIEGNSK2	126319	126110	139791
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	WEQKENVPPGPEACSIHQEGSK	WEQKENVPPGPEAC(UniMod:4)SIHQEGSK	4	WEQKENVPPGPEAC(UniMod:4)SIHQEGSK4	13811.8	11307.3	16551.1
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	WEQNRQPLLLDDR	WEQNRQPLLLDDR	3	WEQNRQPLLLDDR3	5928.86	16396.7	9265.07
A0A8I6AFQ3	A0A8I6AFQ3	A0A8I6AFQ3_RAT	Dtymk	dTMP kinase	1	WEQVPLIK	WEQVPLIK	2	WEQVPLIK2	2664.86		
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	WEQVVDLTYSHR	WEQVVDLTYSHR	3	WEQVVDLTYSHR3	11454.7	19473	13963.6
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	WERDPDTFLIIIK	WERDPDTFLIIIK	3	WERDPDTFLIIIK3	10922.9	7000.51	7729.29
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	WESDPSGTK	WESDPSGTK	2	WESDPSGTK2	64069.2	65754.7	43867.1
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	WESLNAVTSTWQK	WESLNAVTSTWQK	2	WESLNAVTSTWQK2	67879.7	83934.9	90134.8
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	WESQQDVSQTLVSR	WESQQDVSQTLVSR	2	WESQQDVSQTLVSR2	4628.04	3832.94	
A0A8I6A9R8	A0A8I6A9R8	A0A8I6A9R8_RAT	Cope	Coatomer subunit epsilon	1	WETAEGVLQEALDK	WETAEGVLQEALDK	2	WETAEGVLQEALDK2		9315.16	
P10868	P10868	GAMT_RAT	Gamt	Guanidinoacetate N-methyltransferase	1	WETPYMHSLAAAAASR	WETPYMHSLAAAAASR	3	WETPYMHSLAAAAASR3	6038.57	5363.9	5407.61
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	WETSSWSECSR	WETSSWSEC(UniMod:4)SR	2	WETSSWSEC(UniMod:4)SR2	37090.6	33459.7	39055.5
P0C0A2	P0C0A2	VPS36_RAT	Vps36	Vacuolar protein-sorting-associated protein 36	1	WETVPVSQSLQTK	WETVPVSQSLQTK	2	WETVPVSQSLQTK2	3804.33		
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	WEVAALR	WEVAALR	2	WEVAALR2	228154	215698	255258
P35565	P35565	CALX_RAT	Canx	Calnexin	1	WEVDEMK	WEVDEMK	1	WEVDEMK1	3449.23	1528.75	3601.64
P35565	P35565	CALX_RAT	Canx	Calnexin	1	WEVDEMK	WEVDEMK	2	WEVDEMK2	304867	270957	307284
P35565	P35565	CALX_RAT	Canx	Calnexin	1	WEVDEMKETK	WEVDEMKETK	2	WEVDEMKETK2	94165.3	62032.9	94977.3
P35565	P35565	CALX_RAT	Canx	Calnexin	1	WEVDEMKETK	WEVDEMKETK	3	WEVDEMKETK3	321977	213930	239125
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	WEVLIGSSHILTPTR	WEVLIGSSHILTPTR	2	WEVLIGSSHILTPTR2	49147.6	44143.3	43809.9
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	WEVLIGSSHILTPTR	WEVLIGSSHILTPTR	3	WEVLIGSSHILTPTR3	134646	135460	124700
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	WEVLIGSTHILTPQK	WEVLIGSTHILTPQK	2	WEVLIGSTHILTPQK2	6535.93	6335.12	4486.19
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	WEVLIGSTHILTPQK	WEVLIGSTHILTPQK	3	WEVLIGSTHILTPQK3	20442.2	25454.2	24038.2
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	WEYCDIPR	WEYC(UniMod:4)DIPR	2	WEYC(UniMod:4)DIPR2	551285	391971	462459
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	WEYCNLK	WEYC(UniMod:4)NLK	2	WEYC(UniMod:4)NLK2	1.03617e+06	918421	980116
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	WEYCNLKR	WEYC(UniMod:4)NLKR	2	WEYC(UniMod:4)NLKR2	27331.8	40939.2	42825.2
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	WEYCNLKR	WEYC(UniMod:4)NLKR	3	WEYC(UniMod:4)NLKR3	147121	178699	166608
P14740	P14740	DPP4_RAT	Dpp4	Dipeptidyl peptidase 4	1	WEYYDSVYTER	WEYYDSVYTER	2	WEYYDSVYTER2	5689.13		3718.23
D3ZU48	D3ZU48	D3ZU48_RAT	Klhdc4	Kelch domain containing 4	1	WFAAQLK	WFAAQLK	2	WFAAQLK2	23316.3	26015.1	35148.5
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	WFACILK	WFAC(UniMod:4)ILK	2	WFAC(UniMod:4)ILK2	79725.5	81277.3	85033.5
Q9Z1X1	Q9Z1X1	ESYT1_RAT	Esyt1	Extended synaptotagmin-1	1	WFALSGQGQVLMR	WFALSGQGQVLMR	2	WFALSGQGQVLMR2	60892.3	63683.4	62109.6
P68182	P68182;P27791	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	0	WFATTDWIAIYQR	WFATTDWIAIYQR	2	WFATTDWIAIYQR2	180415	175094	171569
P68182	P68182;P27791	KAPCB_RAT	Prkacb	cAMP-dependent protein kinase catalytic subunit beta	0	WFATTDWIAIYQR	WFATTDWIAIYQR	3	WFATTDWIAIYQR3	44520.8	53856	46403.1
B2RYN3	B2RYN3	B2RYN3_RAT	Eef1e1	Eukaryotic translation elongation factor 1 epsilon 1	1	WFCHIQHYPDIR	WFC(UniMod:4)HIQHYPDIR	4	WFC(UniMod:4)HIQHYPDIR4	33344.6	48284.2	30818
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	WFDFPFTR	WFDFPFTR	2	WFDFPFTR2	35616.6	42959.3	39083.8
Q3T1I4	Q3T1I4	PRRC1_RAT	Prrc1	Protein PRRC1	1	WFDIGCLVVEDPVHGIR	WFDIGC(UniMod:4)LVVEDPVHGIR	3	WFDIGC(UniMod:4)LVVEDPVHGIR3	2709.63	4571.85	4914.01
A0A8I5ZQH9	A0A8I5ZQH9	A0A8I5ZQH9_RAT	Dcaf6	DDB1 and CUL4 associated factor 6	1	WFEEASEVAQSNR	WFEEASEVAQSNR	2	WFEEASEVAQSNR2	2601.46	996.91	2692.42
Q7TP98	Q7TP98	ILF2_RAT	Ilf2	Interleukin enhancer-binding factor 2	1	WFEENASQSTVK	WFEENASQSTVK	2	WFEENASQSTVK2	2545.6	2723.82	
A0A8I6A9E8	A0A8I6A9E8	A0A8I6A9E8_RAT	Prkg1	cGMP-dependent protein kinase	1	WFEGFNWEGLR	WFEGFNWEGLR	2	WFEGFNWEGLR2	26101.1	9245.84	3918.68
P26051	P26051	CD44_RAT	Cd44	CD44 antigen	1	WFENEWQGK	WFENEWQGK	2	WFENEWQGK2	96440	114089	112545
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	WFESTDSR	WFESTDSR	2	WFESTDSR2	34359.5	39829.1	34932.5
B5DFA1	B5DFA1	TBD2A_RAT	Tbc1d2	TBC1 domain family member 2A	1	WFFYDER	WFFYDER	2	WFFYDER2	7511.69	7705.36	5890.1
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	WFHGHLSGK	WFHGHLSGK	2	WFHGHLSGK2	12529	13365	13087.1
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	WFHPNITGVEAENLLLTR	WFHPNITGVEAENLLLTR	3	WFHPNITGVEAENLLLTR3	65165.8	64172.3	75352.9
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	WFHQGPNPYSGAQDWIYSGSYWDR	WFHQGPNPYSGAQDWIYSGSYWDR	3	WFHQGPNPYSGAQDWIYSGSYWDR3	18626.6	17578.1	11690.8
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	WFIPNTLK	WFIPNTLK	2	WFIPNTLK2	57141	56070	53667.4
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	WFLAVPLVSLGFK	WFLAVPLVSLGFK	2	WFLAVPLVSLGFK2		12279.4	8553.69
Q4V884	Q4V884	Q4V884_RAT	Cdc16	CDC16 cell division cycle 16 homolog (S. cerevisiae)	1	WFLDALEK	WFLDALEK	2	WFLDALEK2	12783	19630	18126
P49744	P35444;P49744	TSP4_RAT	Thbs4	Thrombospondin-4	0	WFLQHRPQVGYIR	WFLQHRPQVGYIR	3	WFLQHRPQVGYIR3	2.51322e+06	2.61168e+06	2.29802e+06
P49744	P35444;P49744	TSP4_RAT	Thbs4	Thrombospondin-4	0	WFLQHRPQVGYIR	WFLQHRPQVGYIR	4	WFLQHRPQVGYIR4	4.00232e+06	4.63234e+06	4.32014e+06
Q68FR6	Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	1	WFLTCINQPQFR	WFLTC(UniMod:4)INQPQFR	2	WFLTC(UniMod:4)INQPQFR2	1.07528e+06	1.07285e+06	1.01675e+06
Q68FR6	Q68FR6	EF1G_RAT	Eef1g	Elongation factor 1-gamma	1	WFLTCINQPQFR	WFLTC(UniMod:4)INQPQFR	3	WFLTC(UniMod:4)INQPQFR3	194567	233875	231138
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	WFNISFDTFGR	WFNISFDTFGR	2	WFNISFDTFGR2	9597.82	5130.18	4376.36
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	WFNLAVGSTCPWLR	WFNLAVGSTC(UniMod:4)PWLR	2	WFNLAVGSTC(UniMod:4)PWLR2	394980	378643	345975
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	WFNLAVGSTCPWLR	WFNLAVGSTC(UniMod:4)PWLR	3	WFNLAVGSTC(UniMod:4)PWLR3	36894	28873.4	26226.2
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	WFNTCVR	WFNTC(UniMod:4)VR	2	WFNTC(UniMod:4)VR2	117835	141138	130557
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	WFPEGPTHMLPLLMR	WFPEGPTHMLPLLMR	2	WFPEGPTHMLPLLMR2	4608.5	8086.23	
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	WFPEGPTHMLPLLMR	WFPEGPTHMLPLLMR	3	WFPEGPTHMLPLLMR3	49741.5	43820.3	34054.9
D3ZRB3	D3ZRB3	D3ZRB3_RAT	Rhof	Ras homolog family member F, filopodia associated	1	WFPEVTHFCR	WFPEVTHFC(UniMod:4)R	3	WFPEVTHFC(UniMod:4)R3	137020	133954	110085
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	WFQEDDAVQPNSSYTYVWHATER	WFQEDDAVQPNSSYTYVWHATER	3	WFQEDDAVQPNSSYTYVWHATER3	4508.93	5382.06	
D3ZHM9	D3ZHM9;A0A8J8XVI1;A0A8I6A0Y4	D3ZHM9_RAT	ENSRNOG00000068649	Ig-like domain-containing protein	0	WFQQKPGK	WFQQKPGK	2	WFQQKPGK2	30184.7	27350.6	24636.6
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	WFQSAIPSWLQR	WFQSAIPSWLQR	2	WFQSAIPSWLQR2	34849.4	94934.3	23052.5
Q9R189	Q9R189	UN13D_RAT	Unc13d	Protein unc-13 homolog D	1	WFQSAIPSWLQR	WFQSAIPSWLQR	3	WFQSAIPSWLQR3		4069.06	
Q5FVC7	Q5FVC7	ACAP2_RAT	Acap2	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2	1	WFSIQNNQLVYQK	WFSIQNNQLVYQK	2	WFSIQNNQLVYQK2	4567.72	4826.15	7442.58
P04897	P10824;P04897;P08753	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	0	WFTDTSIILFLNK	WFTDTSIILFLNK	2	WFTDTSIILFLNK2	48390.5	43214.3	30365.3
P04897	P10824;P04897;P08753	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	0	WFTDTSIILFLNK	WFTDTSIILFLNK	3	WFTDTSIILFLNK3	7828.48	5496.11	
P04897	P10824;P04897;P08753	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	0	WFTDTSIILFLNKK	WFTDTSIILFLNKK	2	WFTDTSIILFLNKK2	8726.04	5744	2982.16
P04897	P10824;P04897;P08753	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	0	WFTDTSIILFLNKK	WFTDTSIILFLNKK	3	WFTDTSIILFLNKK3	80676	35933.9	77808.2
P23965	P23965	ECI1_RAT	Eci1	Enoyl-CoA delta isomerase 1, mitochondrial	1	WFTIPDHSR	WFTIPDHSR	2	WFTIPDHSR2	24966.8	22873.6	17122.5
P23965	P23965	ECI1_RAT	Eci1	Enoyl-CoA delta isomerase 1, mitochondrial	1	WFTIPDHSR	WFTIPDHSR	3	WFTIPDHSR3	186218	195115	171207
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	WFTSQVIR	WFTSQVIR	2	WFTSQVIR2	291695	352323	299490
O88994	O88994	MARC2_RAT	Mtarc2	Mitochondrial amidoxime reducing component 2	1	WFTSYLK	WFTSYLK	2	WFTSYLK2	35780.7	43044.9	48704.3
Q4V8C3	Q4V8C3	EMAL1_RAT	Eml1	Echinoderm microtubule-associated protein-like 1	1	WFVFDTETK	WFVFDTETK	2	WFVFDTETK2	189984	176602	180340
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	WFVGGIVSWGSINCGGSEQYGVYTK	WFVGGIVSWGSINC(UniMod:4)GGSEQYGVYTK	3	WFVGGIVSWGSINC(UniMod:4)GGSEQYGVYTK3	12442.9	19176.7	7532.86
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	WFVLDAETR	WFVLDAETR	2	WFVLDAETR2	21345.8	13571.7	15551
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	WFVLSNGLLSYYR	WFVLSNGLLSYYR	2	WFVLSNGLLSYYR2	10928.9	6839.81	9663.8
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	WFWDFATR	WFWDFATR	2	WFWDFATR2	2.17375e+06	1.87977e+06	2.01971e+06
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	WFYIDFGGLKPSGSEPTPK	WFYIDFGGLKPSGSEPTPK	3	WFYIDFGGLKPSGSEPTPK3	54322.5	31765.9	45756.3
Q64604	Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	1	WFYIVVVPIDR	WFYIVVVPIDR	2	WFYIVVVPIDR2	3953.6	4980.57	3497.86
P02764	P02764	A1AG_RAT	Orm1	Alpha-1-acid glycoprotein	1	WFYMGAAFR	WFYMGAAFR	2	WFYMGAAFR2	122754	112401	103592
P02764	P02764	A1AG_RAT	Orm1	Alpha-1-acid glycoprotein	1	WFYMGAAFRDPVFK	WFYMGAAFRDPVFK	3	WFYMGAAFRDPVFK3	10296.9	18666.6	10576.1
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	WFYVDFGGVKPVGSELVPK	WFYVDFGGVKPVGSELVPK	3	WFYVDFGGVKPVGSELVPK3	70070	75331.3	70144.3
M0R485	M0R485	M0R485_RAT	Pglyrp2	Peptidoglycan recognition protein 2	1	WGAAPYR	WGAAPYR	2	WGAAPYR2	177865	196445	162210
A0A8I5ZQW6	A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	1	WGASAEECSR	WGASAEEC(UniMod:4)SR	2	WGASAEEC(UniMod:4)SR2	21701.3	22617.5	23716.3
P35444	P35444	COMP_RAT	Comp	Cartilage oligomeric matrix protein	1	WGDACDNCR	WGDAC(UniMod:4)DNC(UniMod:4)R	2	WGDAC(UniMod:4)DNC(UniMod:4)R2	897771	971260	1.01659e+06
P04797	A0A0G2K7M1;A0A8I6A1X7;P04797	G3P_RAT	Gapdh	Glyceraldehyde-3-phosphate dehydrogenase	0	WGDAGAEYVVESTGVFTTMEK	WGDAGAEYVVESTGVFTTMEK	3	WGDAGAEYVVESTGVFTTMEK3	238423	229013	248832
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	WGDEHIPGSPYR	WGDEHIPGSPYR	2	WGDEHIPGSPYR2	1.63771e+06	1.70327e+06	1.71935e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	WGDEHIPGSPYR	WGDEHIPGSPYR	3	WGDEHIPGSPYR3	7.76835e+06	8.61244e+06	9.14911e+06
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	WGDPVTR	WGDPVTR	2	WGDPVTR2	67599	79105.7	57100.4
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	WGDRDSEGTWR	WGDRDSEGTWR	3	WGDRDSEGTWR3	38617.9	58415.9	43264.1
Q561Q9	Q561Q9	Q561Q9_RAT	Ctsw	Cathepsin W	1	WGESVPPTCDWR	WGESVPPTC(UniMod:4)DWR	2	WGESVPPTC(UniMod:4)DWR2	42461.8	37505.8	30050.9
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	WGETPLHTACR	WGETPLHTAC(UniMod:4)R	2	WGETPLHTAC(UniMod:4)R2	4929.26	5817.3	
D4A1J6	D4A1J6	D4A1J6_RAT	Ankfy1	Ankyrin repeat and FYVE domain containing 1	1	WGETPLHTACR	WGETPLHTAC(UniMod:4)R	3	WGETPLHTAC(UniMod:4)R3	35947.6	58140.2	28679.2
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	WGEYVGSPSAPVPVVCFSQPHGER	WGEYVGSPSAPVPVVC(UniMod:4)FSQPHGER	3	WGEYVGSPSAPVPVVC(UniMod:4)FSQPHGER3	6316.77	9439.77	7008.13
Q80Z70	Q80Z70	SE1L1_RAT	Sel1l	Protein sel-1 homolog 1	1	WGFCETEEDAAK	WGFC(UniMod:4)ETEEDAAK	2	WGFC(UniMod:4)ETEEDAAK2	10999	1788.93	3208.91
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	WGGELTPAGR	WGGELTPAGR	2	WGGELTPAGR2	9785.75	18628	6928.64
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	WGGGYEGGSLTK	WGGGYEGGSLTK	2	WGGGYEGGSLTK2	41631.3	14139.9	16338.8
D3ZTX4	D3ZTX4	D3ZTX4_RAT	Mgam	Maltase-glucoamylase	1	WGGHWLGDNTAAWDQLGK	WGGHWLGDNTAAWDQLGK	3	WGGHWLGDNTAAWDQLGK3	10165.7	4296.16	
B1WBY5	B1WBY5	B1WBY5_RAT	Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	1	WGIQSAMNTSIVR	WGIQSAMNTSIVR	2	WGIQSAMNTSIVR2		6773.36	6448.59
Q91XJ1	Q91XJ1	BECN1_RAT	Becn1	Beclin-1	1	WGLAWVSSQFYNK	WGLAWVSSQFYNK	2	WGLAWVSSQFYNK2	11026.5	5277.44	
Q9Z0J5	O89049;Q9Z0J5	TRXR2_RAT	Txnrd2	Thioredoxin reductase 2, mitochondrial	0	WGLGGTCVNVGCIPK	WGLGGTC(UniMod:4)VNVGC(UniMod:4)IPK	2	WGLGGTC(UniMod:4)VNVGC(UniMod:4)IPK2	14477.8	5652.56	11714.7
P14270	P14270	PDE4D_RAT	Pde4d	cAMP-specific 3',5'-cyclic phosphodiesterase 4D	1	WGLHVFR	WGLHVFR	2	WGLHVFR2	7268.64	8236.9	4656.62
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	WGLLSMPIDEEVESLHLR	WGLLSMPIDEEVESLHLR	3	WGLLSMPIDEEVESLHLR3	32421.5	18719.8	12084.5
A0A096MK61	A0A096MK61	A0A096MK61_RAT	Crtap	Cartilage associated protein-like 1	1	WGLSDEHFQPR	WGLSDEHFQPR	3	WGLSDEHFQPR3	12798.9		6990.64
P38718	P38718	MPC2_RAT	Mpc2	Mitochondrial pyruvate carrier 2	1	WGLVCAGLADMAR	WGLVC(UniMod:4)AGLADMAR	2	WGLVC(UniMod:4)AGLADMAR2	43829.9	37694.3	36243.4
P38718	P38718	MPC2_RAT	Mpc2	Mitochondrial pyruvate carrier 2	1	WGLVCAGLADMARPAEK	WGLVC(UniMod:4)AGLADMARPAEK	3	WGLVC(UniMod:4)AGLADMARPAEK3	10318.2	10062.8	11913.3
Q499T5	Q499T5	Q499T5_RAT	Capn7	Calpain 7	1	WGLVPTHAYAVLDIR	WGLVPTHAYAVLDIR	3	WGLVPTHAYAVLDIR3		1039.15	2077.36
A0A8I6A7S3	A0A8I6A7S3	A0A8I6A7S3_RAT	Atpaf2	ATP synthase mitochondrial F1 complex assembly factor 2	1	WGNIEWAHDYELQELR	WGNIEWAHDYELQELR	3	WGNIEWAHDYELQELR3	3669.5	4355.97	2776.6
D3ZCD0	D3ZCD0	D3ZCD0_RAT	Tek	receptor protein-tyrosine kinase	1	WGPDCNRPCTTCK	WGPDC(UniMod:4)NRPC(UniMod:4)TTC(UniMod:4)K	3	WGPDC(UniMod:4)NRPC(UniMod:4)TTC(UniMod:4)K3	20359.6	18978	21180.5
P70490	P70490	MFGM_RAT	Mfge8	Lactadherin	1	WGPELAR	WGPELAR	2	WGPELAR2	69168.7	82744.3	77765.1
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	WGPLKDNEQTIGFYTK	WGPLKDNEQTIGFYTK	3	WGPLKDNEQTIGFYTK3			4745.46
Q5XIG0	Q5XIG0	NUDT9_RAT	Nudt9	ADP-ribose pyrophosphatase, mitochondrial	1	WGPNHAADPIITR	WGPNHAADPIITR	3	WGPNHAADPIITR3	7312.43	6619.02	11680.5
D4ADM2	D4ADM2	D4ADM2_RAT	Pan3	PAN2-PAN3 deadenylation complex subunit PAN3	1	WGQHDGPLPR	WGQHDGPLPR	3	WGQHDGPLPR3			3755.28
D3ZR49	D3ZR49	D3ZR49_RAT	Man1a2	alpha-1,2-Mannosidase	1	WGQYHTSVGGLGDSFYEYLLK	WGQYHTSVGGLGDSFYEYLLK	3	WGQYHTSVGGLGDSFYEYLLK3		5943.55	
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	WGRPNFNSFGSCPILQSSPPVSSK	WGRPNFNSFGSC(UniMod:4)PILQSSPPVSSK	3	WGRPNFNSFGSC(UniMod:4)PILQSSPPVSSK3	4453.89	10242.2	10227.8
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	WGSNELPAEEGK	WGSNELPAEEGK	2	WGSNELPAEEGK2	99793.6	92765.6	97585.4
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	WGSPTSLEGELGTVAIFHEALQASALR	WGSPTSLEGELGTVAIFHEALQASALR	3	WGSPTSLEGELGTVAIFHEALQASALR3	56036.2	22421.6	36537.8
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	WGSQAFCNMR	WGSQAFC(UniMod:4)NMR	2	WGSQAFC(UniMod:4)NMR2	8733.08	12982.7	11780.8
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	WGSVCDDAWDLR	WGSVC(UniMod:4)DDAWDLR	2	WGSVC(UniMod:4)DDAWDLR2	5651.07	7689.66	3980.9
Q6URK4	A0A8I6GJN1;D4A6A2;E9PSU5;F1M6C7;Q6URK4;A0A8I6A4C1	ROA3_RAT	Hnrnpa3	Heterogeneous nuclear ribonucleoprotein A3	0	WGTLTDCVVMR	WGTLTDC(UniMod:4)VVMR	2	WGTLTDC(UniMod:4)VVMR2	4668.96	5368.78	2509.18
A0A8I5ZUI2	A0A8I5ZUI2	A0A8I5ZUI2_RAT	Ano10	Anoctamin	1	WGTLVMK	WGTLVMK	2	WGTLVMK2	6713.15	9172.53	5832.95
D3ZPK4	D3ZPK4	D3ZPK4_RAT	Ssc5d	Scavenger receptor cysteine rich family member with 5 domains	1	WGTVCDDSWDMR	WGTVC(UniMod:4)DDSWDMR	2	WGTVC(UniMod:4)DDSWDMR2	6964.97	8832.13	7756.47
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	WGTVCDNLWNLLDAHVVCR	WGTVC(UniMod:4)DNLWNLLDAHVVC(UniMod:4)R	3	WGTVC(UniMod:4)DNLWNLLDAHVVC(UniMod:4)R3	88159	90396.7	69651.6
A0A0G2JWX9	A0A0G2JWX9	A0A0G2JWX9_RAT	Clca1	Chloride channel accessory 1	1	WGVFDEYNNNEK	WGVFDEYNNNEK	2	WGVFDEYNNNEK2	8203.59	6027.34	8912.24
P19468	P19468	GSH1_RAT	Gclc	Glutamate--cysteine ligase catalytic subunit	1	WGVISASVDDR	WGVISASVDDR	2	WGVISASVDDR2	5889.63	6534.49	1471.69
A0A0U1RRS5	A0A0U1RRS5	A0A0U1RRS5_RAT	Smg7	Nonsense-mediated mRNA decay factor	1	WGVSDFIK	WGVSDFIK	2	WGVSDFIK2		8549.8	4603.14
G3V8R8	G3V8R8	G3V8R8_RAT	Kcnk6	Potassium channel subfamily K member	1	WGWHPQR	WGWHPQR	2	WGWHPQR2	6320.9		
D3ZHZ3	D3ZHZ3	D3ZHZ3_RAT	Osbpl3	Oxysterol-binding protein	1	WHESIYCGGASSSTCVWR	WHESIYC(UniMod:4)GGASSSTC(UniMod:4)VWR	3	WHESIYC(UniMod:4)GGASSSTC(UniMod:4)VWR3	1061.48	6466.11	
Q9ET61	Q9ET61	C1QR1_RAT	Cd93	Complement component C1q receptor	1	WHESPCGTPDAPGNSIEGFLCK	WHESPC(UniMod:4)GTPDAPGNSIEGFLC(UniMod:4)K	3	WHESPC(UniMod:4)GTPDAPGNSIEGFLC(UniMod:4)K3	303514	351522	375949
Q5BJ92	Q5BJ92	PP4C_RAT	Ppp4c	Serine/threonine-protein phosphatase 4 catalytic subunit	1	WHFNETVLTVWSAPNYCYR	WHFNETVLTVWSAPNYC(UniMod:4)YR	3	WHFNETVLTVWSAPNYC(UniMod:4)YR3	4862.58	7221.01	9682.65
Q920L2	Q920L2	SDHA_RAT	Sdha	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	1	WHFYDTVK	WHFYDTVK	2	WHFYDTVK2	15096	26040.6	6896.59
P14056	A0A8I6ATH0;P14056;P11345	ARAF_RAT	Araf	Serine/threonine-protein kinase A-Raf	0	WHGDVAVK	WHGDVAVK	2	WHGDVAVK2	5646.79	11091.2	14196.7
A0A8I5ZQW6	A0A8I6G920;A0A8I5ZQW6	A0A8I5ZQW6_RAT	Ksr1	non-specific serine/threonine protein kinase	0	WHGEVAIR	WHGEVAIR	2	WHGEVAIR2	10767.5		5296.69
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	WHIDTIMR	WHIDTIMR	2	WHIDTIMR2	9942.39	7077.43	5859.43
Q566Q8	Q566Q8	CK068_RAT	Bles03	UPF0696 protein C11orf68 homolog	1	WHLCPTLYESR	WHLC(UniMod:4)PTLYESR	3	WHLC(UniMod:4)PTLYESR3		4405.02	6315.13
G3V996	G3V996	G3V996_RAT	Letmd1	LETM1 domain containing 1	1	WHLEDLCTK	WHLEDLC(UniMod:4)TK	3	WHLEDLC(UniMod:4)TK3	2995.14	3465.45	7071.98
Q32KJ6	Q32KJ6	GALNS_RAT	Galns	N-acetylgalactosamine-6-sulfatase	1	WHLGHRPQFHPLK	WHLGHRPQFHPLK	4	WHLGHRPQFHPLK4	7789.4		10355.4
Q32KK0	Q32KK0	Q32KK0_RAT	Arsl	Arylsulfatase E	1	WHLGLSCR	WHLGLSC(UniMod:4)R	2	WHLGLSC(UniMod:4)R2	14696.5	10429.6	
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	WHLLSMGDPGHAQSVHFSAHSVTVR	WHLLSMGDPGHAQSVHFSAHSVTVR	3	WHLLSMGDPGHAQSVHFSAHSVTVR3	4274.78		1948.77
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	WHLLSMGDPGHAQSVHFSAHSVTVR	WHLLSMGDPGHAQSVHFSAHSVTVR	4	WHLLSMGDPGHAQSVHFSAHSVTVR4	19036.7	18350.2	12844.2
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	WHLNLNVR	WHLNLNVR	2	WHLNLNVR2	2741.19	2908.33	
A0A8I5Y656	A0A8I5Y656	A0A8I5Y656_RAT	Rabgap1	RAB GTPase activating protein 1	1	WHLNLNVRPK	WHLNLNVRPK	3	WHLNLNVRPK3	29403.2	26802.2	22117.6
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	WHLVDDLSR	WHLVDDLSR	2	WHLVDDLSR2	22855.8	22789.5	17730.1
A0A8I6ACB7	A0A8I6ACB7	A0A8I6ACB7_RAT	Tmc8	Transmembrane channel-like protein	1	WHLVDDLSR	WHLVDDLSR	3	WHLVDDLSR3	26974.3	32903.4	22738.2
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	WHMNLNSLMDR	WHMNLNSLMDR	2	WHMNLNSLMDR2	102575	127096	78405.4
D3ZIP8	D3ZIP8	D3ZIP8_RAT	Endod1	Endonuclease domain containing 1	1	WHMNLNSLMDR	WHMNLNSLMDR	3	WHMNLNSLMDR3	398662	457427	366083
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	WHNQVTGEQIAIK	WHNQVTGEQIAIK	3	WHNQVTGEQIAIK3	19177.5	13815.4	25278.6
A0A8I5ZXB9	A0A8I5ZXB9	A0A8I5ZXB9_RAT	Kifap3	Kinesin-associated protein 3	1	WHNSQWLEMVESR	WHNSQWLEMVESR	2	WHNSQWLEMVESR2	3057.38		
A0A8I5ZXB9	A0A8I5ZXB9	A0A8I5ZXB9_RAT	Kifap3	Kinesin-associated protein 3	1	WHNSQWLEMVESR	WHNSQWLEMVESR	3	WHNSQWLEMVESR3	3963.17	11106.6	11100.8
Q32PX6	Q32PX6	Q32PX6_RAT	Rhog	Ras homolog family member G	1	WHPEVCHHCPDVPILLVGTK	WHPEVC(UniMod:4)HHC(UniMod:4)PDVPILLVGTK	3	WHPEVC(UniMod:4)HHC(UniMod:4)PDVPILLVGTK3	46630.7		37888.6
Q32PX6	Q32PX6	Q32PX6_RAT	Rhog	Ras homolog family member G	1	WHPEVCHHCPDVPILLVGTK	WHPEVC(UniMod:4)HHC(UniMod:4)PDVPILLVGTK	4	WHPEVC(UniMod:4)HHC(UniMod:4)PDVPILLVGTK4	162536	159846	164566
P58751	P58751	RELN_RAT	Reln	Reelin	1	WHQPAPFDK	WHQPAPFDK	2	WHQPAPFDK2	47927.8	40395.8	51563.5
Q6AYF8	Q6AYF8	Q6AYF8_RAT	Serpinb9	Serpin family B member 9	1	WHQPFNK	WHQPFNK	2	WHQPFNK2	3886.52	4412.3	7684.6
P82450	P82450	SIAE_RAT	Siae	Sialate O-acetylesterase	1	WHQTADFGSVPNPK	WHQTADFGSVPNPK	3	WHQTADFGSVPNPK3	22897.1	5568.16	19588.8
G3V9M3	G3V9M3	G3V9M3_RAT	Wdr47	WD repeat domain 47	1	WHTQDLSFLSSSADR	WHTQDLSFLSSSADR	3	WHTQDLSFLSSSADR3	7307.44	7176.76	7391.11
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	WHVFLNNCLSNLK	WHVFLNNC(UniMod:4)LSNLK	3	WHVFLNNC(UniMod:4)LSNLK3	13344.5	7716.97	8928.8
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	WHVVSSK	WHVVSSK	2	WHVVSSK2	12534	16042.1	16040
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	WHYIASSECIPFWPENLSGK	WHYIASSEC(UniMod:4)IPFWPENLSGK	3	WHYIASSEC(UniMod:4)IPFWPENLSGK3	18545.2	10872.8	15190.5
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	WIADLPSMQLNR	WIADLPSMQLNR	2	WIADLPSMQLNR2	26484.6	28490	31857.3
P0C0R5	P0C0R5	PI3R4_RAT	Pik3r4	Phosphoinositide 3-kinase regulatory subunit 4	1	WIAFQILTAVDQAHK	WIAFQILTAVDQAHK	3	WIAFQILTAVDQAHK3	10937.1	14372	11364.7
D3ZRI9	D3ZRI9	D3ZRI9_RAT	Gan	Gigaxonin	1	WIAHDVEMR	WIAHDVEMR	3	WIAHDVEMR3	19976.1	11804	13948.1
Q2LC84	Q2LC84	NUMB_RAT	Numb	Protein numb homolog	1	WICHCFMAVK	WIC(UniMod:4)HC(UniMod:4)FMAVK	3	WIC(UniMod:4)HC(UniMod:4)FMAVK3	5286.93		3281.23
Q9WVB1	A0A0G2JT78;Q9WVB1	RAB6A_RAT	Rab6a	Ras-related protein Rab-6A	0	WIDDVRTER	WIDDVRTER	3	WIDDVRTER3	26095.5	39322.7	28364.1
A0A8I5ZPZ9	A0A8I5ZPZ9	A0A8I5ZPZ9_RAT	Ptpa	Serine/threonine-protein phosphatase 2A activator	1	WIDETPPVDQPSR	WIDETPPVDQPSR	2	WIDETPPVDQPSR2	26877.1	25951.8	25865.9
Q02253	Q02253	MMSA_RAT	Aldh6a1	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial	1	WIDIHNPATNEVVGR	WIDIHNPATNEVVGR	2	WIDIHNPATNEVVGR2		5220.58	4329.53
Q02253	Q02253	MMSA_RAT	Aldh6a1	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial	1	WIDIHNPATNEVVGR	WIDIHNPATNEVVGR	3	WIDIHNPATNEVVGR3	17005.5	13834.5	12340.1
Q9JLS4	Q9JLS4	SFRP4_RAT	Sfrp4	Secreted frizzled-related protein 4	1	WIDITPDMMVQER	WIDITPDMMVQER	2	WIDITPDMMVQER2	5001.82		5659.49
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	WIDLSECDFGLALLNNCK	WIDLSEC(UniMod:4)DFGLALLNNC(UniMod:4)K	3	WIDLSEC(UniMod:4)DFGLALLNNC(UniMod:4)K3	2360.48		1785.86
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	WIDMCSEDIK	WIDMC(UniMod:4)SEDIK	2	WIDMC(UniMod:4)SEDIK2	2565.84	3974.86	5911.46
P85972	P85972	VINC_RAT	Vcl	Vinculin	1	WIDNPTVDDR	WIDNPTVDDR	2	WIDNPTVDDR2	1.5916e+06	1.38322e+06	1.60523e+06
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	WIEETTAQQEMMK	WIEETTAQQEMMK	2	WIEETTAQQEMMK2	13221.8	9356.99	16436
P04916	P04916	RET4_RAT	Rbp4	Retinol-binding protein 4	1	WIEHNGYCQSR	WIEHNGYC(UniMod:4)QSR	2	WIEHNGYC(UniMod:4)QSR2	6541.75	3920.82	2525.36
P04916	P04916	RET4_RAT	Rbp4	Retinol-binding protein 4	1	WIEHNGYCQSR	WIEHNGYC(UniMod:4)QSR	3	WIEHNGYC(UniMod:4)QSR3	43510.6	41598.9	35730.9
D3ZHZ3	D3ZHZ3	D3ZHZ3_RAT	Osbpl3	Oxysterol-binding protein	1	WIEHYGEIVIK	WIEHYGEIVIK	3	WIEHYGEIVIK3	9042.96	3062.67	8165.94
G3V9T7	G3V9T7	GET3_RAT	Get3	ATPase Get3	1	WIFVGGK	WIFVGGK	2	WIFVGGK2	232565	204280	244468
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	WIGLDLVHGK	WIGLDLVHGK	2	WIGLDLVHGK2	18429.7	18411.9	10090.3
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	WIGLDLVHGKPR	WIGLDLVHGKPR	2	WIGLDLVHGKPR2	9220.24	5694.03	5681.66
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	WIGLDLVHGKPR	WIGLDLVHGKPR	3	WIGLDLVHGKPR3	379096	394472	376070
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	WIGQPVCK	WIGQPVC(UniMod:4)K	2	WIGQPVC(UniMod:4)K2	270038	303353	241991
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	WIGSETDLEPPVVK	WIGSETDLEPPVVK	2	WIGSETDLEPPVVK2	146733	166460	191145
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	WIGSETDLEPPVVK	WIGSETDLEPPVVK	3	WIGSETDLEPPVVK3			9532.7
F1LRE5	F1LRE5	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	1	WIHALEETILR	WIHALEETILR	2	WIHALEETILR2	9973.44		4279.31
F1LRE5	F1LRE5	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	1	WIHALEETILR	WIHALEETILR	3	WIHALEETILR3	7587.58	10153.8	4764.7
Q5U2N3	Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	1	WIHFGTEVTNSSGR	WIHFGTEVTNSSGR	3	WIHFGTEVTNSSGR3	6201.79	9577.15	12405.9
P29411	P29411	KAD3_RAT	Ak3	GTP:AMP phosphotransferase AK3, mitochondrial	1	WIHPASGR	WIHPASGR	2	WIHPASGR2	7632.01	5610.73	9314.96
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	WIHQQSTEGDADIR	WIHQQSTEGDADIR	3	WIHQQSTEGDADIR3	4269.74	5826.88	
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	WIHSYIGER	WIHSYIGER	2	WIHSYIGER2	1.30105e+06	1.16284e+06	1.09745e+06
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	WIHSYIGER	WIHSYIGER	3	WIHSYIGER3	6.00546e+06	5.91234e+06	6.49997e+06
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	WIHSYIGERDVSLK	WIHSYIGERDVSLK	3	WIHSYIGERDVSLK3	14862.4		11598.8
P31394	P31394	PROC_RAT	Proc	Vitamin K-dependent protein C	1	WIHSYIGERDVSLK	WIHSYIGERDVSLK	4	WIHSYIGERDVSLK4	8994.32	17472.7	25057.3
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	WILENDPTELDLR	WILENDPTELDLR	2	WILENDPTELDLR2	99712.1	114605	110654
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	WILENDPTELDLR	WILENDPTELDLR	3	WILENDPTELDLR3		6327.74	4258.77
P51111	P51111	HD_RAT	Htt	Huntingtin	1	WILPSSAAR	WILPSSAAR	2	WILPSSAAR2	56148.7	44233.8	45720.1
Q5BJM8	Q5BJM8	ZNT7_RAT	Slc30a7	Zinc transporter 7	1	WILSQTHNIFTQAGVR	WILSQTHNIFTQAGVR	3	WILSQTHNIFTQAGVR3	5048.17		3817.87
Q6IE64	Q6IE64	C1RL_RAT	C1rl	Complement C1r subcomponent-like protein	1	WILTAAHTIFPK	WILTAAHTIFPK	3	WILTAAHTIFPK3	11912	11757.7	15201.8
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	WILTAAHTIYPK	WILTAAHTIYPK	2	WILTAAHTIYPK2	389451	234866	220471
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	WILTAAHTIYPK	WILTAAHTIYPK	3	WILTAAHTIYPK3	2.13602e+06	1.75862e+06	1.65118e+06
D4ABY2	D4ABY2	COPG2_RAT	Copg2	Coatomer subunit gamma-2	1	WINEAQEAASSDNIMVQYHALGVLYHLR	WINEAQEAASSDNIMVQYHALGVLYHLR	4	WINEAQEAASSDNIMVQYHALGVLYHLR4	15357.1	19395.8	13643.4
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	WINGMDEQIMSWATSRPEDWHLGGK	WINGMDEQIMSWATSRPEDWHLGGK	4	WINGMDEQIMSWATSRPEDWHLGGK4	11747.2	4219.4	
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	WIPEAQILGGGR	WIPEAQILGGGR	2	WIPEAQILGGGR2	118230	112883	117691
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	WIPLSSESQAPLAQPESPTASAGDEPR	WIPLSSESQAPLAQPESPTASAGDEPR	3	WIPLSSESQAPLAQPESPTASAGDEPR3	9309.41	11408.3	11636.4
P58751	P58751	RELN_RAT	Reln	Reelin	1	WIQESSSQK	WIQESSSQK	2	WIQESSSQK2	319325	361488	346466
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	WIQTVLAR	WIQTVLAR	2	WIQTVLAR2	63107.3	91007.3	60588
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	WISAMEDQLR	WISAMEDQLR	2	WISAMEDQLR2	124892	123956	111182
Q07936	A0A8I6G714;Q07936	ANXA2_RAT	Anxa2	Annexin A2	0	WISIMTER	WISIMTER	2	WISIMTER2	15903.9	18864.1	15696.7
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	WISLNTVALVTDNAVYHWSMEGESQPVK	WISLNTVALVTDNAVYHWSMEGESQPVK	4	WISLNTVALVTDNAVYHWSMEGESQPVK4		6583.39	2846.75
A0A0G2JVT8	A0A8I6ARY9;A0A0G2JVT8	A0A0G2JVT8_RAT	Samd9l1	Sterile alpha motif domain-containing protein 9-like	0	WITEDLK	WITEDLK	2	WITEDLK2	9491.24	8438.95	4405.68
Q6P6S5	Q6P6S5	GET1_RAT	Get1	Guided entry of tail-anchored proteins factor 1	1	WITPLDR	WITPLDR	2	WITPLDR2	18133.8	23383.3	16374.6
B0BN86	B0BN86;A0A8I6AHI0	TMM11_RAT	Tmem11	Transmembrane protein 11, mitochondrial	0	WITVGNCLHK	WITVGNC(UniMod:4)LHK	3	WITVGNC(UniMod:4)LHK3	14528.6	8822.83	7295.96
Q641X8	Q641X8;A0A0G2K273	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	0	WIVNLIR	WIVNLIR	2	WIVNLIR2	108703	122245	117844
Q566C7	Q566C7	NUDT3_RAT	Nudt3	Diphosphoinositol polyphosphate phosphohydrolase 1	1	WIVPGGGMEPEEEPSVAAVR	WIVPGGGMEPEEEPSVAAVR	3	WIVPGGGMEPEEEPSVAAVR3		13596.7	10712.4
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	WIVSQMYK	WIVSQMYK	2	WIVSQMYK2	20938.1	32388.6	28108
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	WIVSSLIPK	WIVSSLIPK	2	WIVSSLIPK2	35747.8	52463	41578.3
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	WIVTAAHCFDK	WIVTAAHC(UniMod:4)FDK	2	WIVTAAHC(UniMod:4)FDK2	93212.5	50457.9	46844.8
Q8K3U6	Q8K3U6	FA7_RAT	F7	Coagulation factor VII	1	WIVTAAHCFDK	WIVTAAHC(UniMod:4)FDK	3	WIVTAAHC(UniMod:4)FDK3	561172	522250	479094
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	WIVTAAHCLK	WIVTAAHC(UniMod:4)LK	2	WIVTAAHC(UniMod:4)LK2	33062.6	18958.5	20077.8
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	WIVTAAHCLK	WIVTAAHC(UniMod:4)LK	3	WIVTAAHC(UniMod:4)LK3	99512.4	102171	63756.6
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	WIVTAAHCLKPGDK	WIVTAAHC(UniMod:4)LKPGDK	2	WIVTAAHC(UniMod:4)LKPGDK2	334571	267108	216694
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	WIVTAAHCLKPGDK	WIVTAAHC(UniMod:4)LKPGDK	3	WIVTAAHC(UniMod:4)LKPGDK3	370065	240887	283232
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	WIVTAAHCLKPGDK	WIVTAAHC(UniMod:4)LKPGDK	4	WIVTAAHC(UniMod:4)LKPGDK4	309962	261418	273795
Q5RJK5	D3ZRS6;Q5RJK5	Q5RJK5_RAT	Cbx3	Chromobox 3	0	WKDSDEADLVLAK	WKDSDEADLVLAK	3	WKDSDEADLVLAK3	1948.66		
P05544	P05544	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	1	WKDSLIPR	WKDSLIPR	2	WKDSLIPR2	63996.7	60420.4	57539.2
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	WKDSLRPSMIDELYLPK	WKDSLRPSMIDELYLPK	3	WKDSLRPSMIDELYLPK3	53477.5	88740.4	72598.4
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	WKDSLRPSMIDELYLPK	WKDSLRPSMIDELYLPK	4	WKDSLRPSMIDELYLPK4	97335.1	134178	150540
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	WKEATIPGHLNSYTIK	WKEATIPGHLNSYTIK	2	WKEATIPGHLNSYTIK2	330368	466437	329168
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	WKEATIPGHLNSYTIK	WKEATIPGHLNSYTIK	3	WKEATIPGHLNSYTIK3	1.21594e+06	1.72574e+06	1.34751e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	WKEATIPGHLNSYTIK	WKEATIPGHLNSYTIK	4	WKEATIPGHLNSYTIK4	4.34354e+06	6.34778e+06	6.59178e+06
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	WKEMADRYDR	WKEMADRYDR	3	WKEMADRYDR3	18924.7	39194.2	22877.8
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	WKEVAQDCTK	WKEVAQDC(UniMod:4)TK	2	WKEVAQDC(UniMod:4)TK2	11485.1	11500.9	9427.25
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	WKEVAQDCTK	WKEVAQDC(UniMod:4)TK	3	WKEVAQDC(UniMod:4)TK3	20340.5	16906.8	21553.2
F1LTN6	P01835;F1LTN6	F1LTN6_RAT	AABR07060872.1	Ig-like domain-containing protein	0	WKIDGTERR	WKIDGTERR	3	WKIDGTERR3	15266.2	17224.7	14116.6
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	WKNPVTSVDAAFR	WKNPVTSVDAAFR	2	WKNPVTSVDAAFR2	707254	647351	603329
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	WKNPVTSVDAAFR	WKNPVTSVDAAFR	3	WKNPVTSVDAAFR3	2.37918e+06	2.57619e+06	2.43114e+06
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	WKNPVTSVDAAFRGPDSVFLIK	WKNPVTSVDAAFRGPDSVFLIK	4	WKNPVTSVDAAFRGPDSVFLIK4	8571.73	15118.8	9276.7
Q5XIE6	Q5XIE6	HIBCH_RAT	Hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	1	WKPADLKDVTDEDLNSYFK	WKPADLKDVTDEDLNSYFK	4	WKPADLKDVTDEDLNSYFK4	9185.47	11673.6	8133.35
A0A0G2K350	A0A0G2K350	A0A0G2K350_RAT	Napg	NSF attachment protein gamma	1	WKPDYDSAASEYGK	WKPDYDSAASEYGK	2	WKPDYDSAASEYGK2	18025.1	11763.5	16162
A0A0G2K350	A0A0G2K350	A0A0G2K350_RAT	Napg	NSF attachment protein gamma	1	WKPDYDSAASEYGK	WKPDYDSAASEYGK	3	WKPDYDSAASEYGK3	26369	33403.4	29863.1
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	WKPMDVEDSLELLSSHYTNPTVR	WKPMDVEDSLELLSSHYTNPTVR	4	WKPMDVEDSLELLSSHYTNPTVR4		11438.9	3490.8
P35565	P35565	CALX_RAT	Canx	Calnexin	1	WKPPMIDNPNYQGIWK	WKPPMIDNPNYQGIWK	3	WKPPMIDNPNYQGIWK3	48189.4	58166.1	57666.1
P35565	P35565	CALX_RAT	Canx	Calnexin	1	WKPPMIDNPNYQGIWKPR	WKPPMIDNPNYQGIWKPR	3	WKPPMIDNPNYQGIWKPR3	658862	589523	513385
P35565	P35565	CALX_RAT	Canx	Calnexin	1	WKPPMIDNPNYQGIWKPR	WKPPMIDNPNYQGIWKPR	4	WKPPMIDNPNYQGIWKPR4	1.04818e+06	1.16642e+06	1.04261e+06
A0A0G2K9T1	A0A0G2K9T1	A0A0G2K9T1_RAT	Itch	E3 ubiquitin-protein ligase	1	WKQPLTVIVTPMSK	WKQPLTVIVTPMSK	3	WKQPLTVIVTPMSK3	21122.9	16253.3	14385.5
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	WKTPAAVLPTPVAVSQPIR	WKTPAAVLPTPVAVSQPIR	3	WKTPAAVLPTPVAVSQPIR3	3699.26	1669.05	3409.45
D4ACA1	D4ACA1	D4ACA1_RAT	Nxpe3	Neurexophilin and PC-esterase domain family, member 3	1	WKVPDVDLVPFVK	WKVPDVDLVPFVK	3	WKVPDVDLVPFVK3	6683.8	6895.04	13159.6
P09006	P09006	SPA3N_RAT	Serpina3n	Serine protease inhibitor A3N	1	WKVPFDPR	WKVPFDPR	2	WKVPFDPR2	147242	136436	119534
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	WLADFLR	WLADFLR	2	WLADFLR2	21105.6	26195.4	22947.7
P24329	P24329	THTR_RAT	Tst	Thiosulfate sulfurtransferase	1	WLAESIR	WLAESIR	2	WLAESIR2	66457.1	72046	87475
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	WLAIDANAR	WLAIDANAR	2	WLAIDANAR2	501188	537080	500010
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	WLAISFASAHLTMTEPYR	WLAISFASAHLTMTEPYR	3	WLAISFASAHLTMTEPYR3	6695.42	4153.89	4952.24
Q63009	Q63009;A0A0G2K9I8	ANM1_RAT	Prmt1	Protein arginine N-methyltransferase 1	0	WLAPDGLIFPDR	WLAPDGLIFPDR	2	WLAPDGLIFPDR2	59955.8	43103.4	55706.6
Q6AXY8	Q6AXY8	Q6AXY8_RAT	Dhrs1	Dehydrogenase/reductase 1	1	WLASYLPGFLR	WLASYLPGFLR	2	WLASYLPGFLR2	3487.78	4602.13	
D3ZUM4	D3ZUM4	D3ZUM4_RAT	Glb1	Beta-galactosidase	1	WLAVLLPK	WLAVLLPK	2	WLAVLLPK2	33614.4	31205.7	25399.2
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	WLCNDQIDAGTR	WLC(UniMod:4)NDQIDAGTR	2	WLC(UniMod:4)NDQIDAGTR2	2960.26	5481.23	2054.93
Q32PZ3	Q32PZ3	UN45A_RAT	Unc45a	Protein unc-45 homolog A	1	WLCNDQIDAGTRR	WLC(UniMod:4)NDQIDAGTRR	3	WLC(UniMod:4)NDQIDAGTRR3	18629.5	17095	15211.3
A0A8I6G9X6	A0A8I6G9X6	A0A8I6G9X6_RAT	Kntc1	Kinetochore associated 1	1	WLCPSTAPGEK	WLC(UniMod:4)PSTAPGEK	2	WLC(UniMod:4)PSTAPGEK2	4394.22	4841.77	9802
F1LNN8	F1LNN8	F1LNN8_RAT	Dapk1	non-specific serine/threonine protein kinase	1	WLCTNVLGK	WLC(UniMod:4)TNVLGK	2	WLC(UniMod:4)TNVLGK2	20108	25547.2	14404
A0A8I5ZVX1	A0A8I6ANB2;A0A8I5ZVX1	A0A8I5ZVX1_RAT	Ppfibp2	PPFIA binding protein 2	0	WLDDIGLPQYK	WLDDIGLPQYK	2	WLDDIGLPQYK2	150535	161796	180530
B2RYS2	F7FFF0;B2RYS2	B2RYS2_RAT	Uqcrb	Cytochrome b-c1 complex subunit 7	0	WLDGFRK	WLDGFRK	2	WLDGFRK2	34702.8	23424.5	31531.5
Q5RJR8	Q5RJR8	LRC59_RAT	Lrrc59	Leucine-rich repeat-containing protein 59	1	WLDLKDNPLDPVLAK	WLDLKDNPLDPVLAK	3	WLDLKDNPLDPVLAK3	27383.6	28016.6	23367.5
P35859	P35859	ALS_RAT	Igfals	Insulin-like growth factor-binding protein complex acid labile subunit	1	WLDLSHNR	WLDLSHNR	2	WLDLSHNR2	1.88567e+06	2.15814e+06	1.90471e+06
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	WLDNILDSLDK	WLDNILDSLDK	2	WLDNILDSLDK2	6006.91	4888.55	7107.09
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	WLDNILDSLDKK	WLDNILDSLDKK	3	WLDNILDSLDKK3	18636.4	18808.5	18624.3
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	WLDQAIPSVAEILGETYK	WLDQAIPSVAEILGETYK	3	WLDQAIPSVAEILGETYK3	7241.74	7567.62	5543.95
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	WLDQAIPSVAEILGETYKDDIRR	WLDQAIPSVAEILGETYKDDIRR	4	WLDQAIPSVAEILGETYKDDIRR4	8438.72	6768.43	11885.5
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	WLDQMDIPNTLEDLEVVQHR	WLDQMDIPNTLEDLEVVQHR	3	WLDQMDIPNTLEDLEVVQHR3	65598.9	66621.5	82312.4
D3ZSY8	D3ZSY8	D3ZSY8_RAT	Tbc1d10b	TBC1 domain family, member 10b	1	WLDVIEK	WLDVIEK	2	WLDVIEK2	68058.5	71955.5	75529.6
Q6P6S9	Q6P6S9	ENTP5_RAT	Entpd5	Ectonucleoside triphosphate diphosphohydrolase 5	1	WLEAEWIFGGVK	WLEAEWIFGGVK	2	WLEAEWIFGGVK2	18856.3	25933.7	25353.4
A0A8I6AL39	A0A8I6AL39	A0A8I6AL39_RAT	Fgd3	FYVE, RhoGEF and PH domain containing 3	1	WLEALSTASR	WLEALSTASR	2	WLEALSTASR2	10589.7	14419.4	3875.74
A0A8I6G4F0	A0A8I6G4F0	A0A8I6G4F0_RAT	Thbs3	Thrombospondin 3	1	WLEASVVGK	WLEASVVGK	2	WLEASVVGK2	56129.4	59988.3	72337.6
B5DF48	B5DF48	B5DF48_RAT	Tyw1	tRNA 4-demethylwyosine synthase (AdoMet-dependent)	1	WLEEAANDFR	WLEEAANDFR	2	WLEEAANDFR2	3139.06	3980.87	
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	WLEEVER	WLEEVER	2	WLEEVER2	22591.1	19341.6	29092.8
Q2LC84	Q2LC84	NUMB_RAT	Numb	Protein numb homolog	1	WLEEVSK	WLEEVSK	2	WLEEVSK2	21526.3	19014.6	20793.8
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	WLELSGANSK	WLELSGANSK	2	WLELSGANSK2	88493.3	83969.1	99408
D3ZSY8	D3ZSY8	D3ZSY8_RAT	Tbc1d10b	TBC1 domain family, member 10b	1	WLEMFSNWDK	WLEMFSNWDK	2	WLEMFSNWDK2	21197.2	22721.4	15285.2
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	WLEPLLER	WLEPLLER	2	WLEPLLER2	230609	217107	226614
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	WLEQFEMALSNIRPDYADSNFHDFK	WLEQFEMALSNIRPDYADSNFHDFK	4	WLEQFEMALSNIRPDYADSNFHDFK4	9182.44	13382.5	5283.18
A0A8I5ZTW6	A0A8I5ZTW6	A0A8I5ZTW6_RAT	Gopc	Golgi associated PDZ and coiled-coil motif containing	1	WLEVLEKEFDK	WLEVLEKEFDK	3	WLEVLEKEFDK3	6770.29	12417.1	13257.4
O54783	O54783	CHKB_RAT	Chkb	Choline/ethanolamine kinase	1	WLFGTMER	WLFGTMER	2	WLFGTMER2	5677.92	8320.5	8491.03
P16573	P16573	CEAM1_RAT	Ceacam1	Carcinoembryonic antigen-related cell adhesion molecule 1	1	WLFNSQSLQLTDR	WLFNSQSLQLTDR	2	WLFNSQSLQLTDR2	101347	105594	114697
P16573	P16573	CEAM1_RAT	Ceacam1	Carcinoembryonic antigen-related cell adhesion molecule 1	1	WLFNSQSLQLTDR	WLFNSQSLQLTDR	3	WLFNSQSLQLTDR3	10021.6	7648.08	7285.86
P05503	P05503	COX1_RAT	Mtco1	Cytochrome c oxidase subunit 1	1	WLFSTNHK	WLFSTNHK	2	WLFSTNHK2	25817		27196.3
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	WLFTEIR	WLFTEIR	2	WLFTEIR2	33114.2	28175.9	36051.6
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	WLGAEAVCIINFQHLILPER	WLGAEAVC(UniMod:4)IINFQHLILPER	3	WLGAEAVC(UniMod:4)IINFQHLILPER3	8557.84	6042.5	9947.34
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	WLGEPIK	WLGEPIK	2	WLGEPIK2	80061.6	65205.9	73823.3
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	WLGEQLK	WLGEQLK	2	WLGEQLK2	57217.4	77561.4	57901.8
F1LXA0	F1LXA0	F1LXA0_RAT	Ndufa12	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	1	WLHCMTDDPPTTKPLTAR	WLHC(UniMod:4)MTDDPPTTKPLTAR	3	WLHC(UniMod:4)MTDDPPTTKPLTAR3	45763.4	37606.6	36659.6
F1LXA0	F1LXA0	F1LXA0_RAT	Ndufa12	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	1	WLHCMTDDPPTTKPLTAR	WLHC(UniMod:4)MTDDPPTTKPLTAR	4	WLHC(UniMod:4)MTDDPPTTKPLTAR4	105978	110405	133047
Q5U316	Q5U316	RAB35_RAT	Rab35	Ras-related protein Rab-35	1	WLHEINQNCDDVCR	WLHEINQNC(UniMod:4)DDVC(UniMod:4)R	2	WLHEINQNC(UniMod:4)DDVC(UniMod:4)R2	1814.08		1629.93
Q5U316	Q5U316	RAB35_RAT	Rab35	Ras-related protein Rab-35	1	WLHEINQNCDDVCR	WLHEINQNC(UniMod:4)DDVC(UniMod:4)R	3	WLHEINQNC(UniMod:4)DDVC(UniMod:4)R3	39779.3	39501	41624.7
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	WLHGLESQIQSDDYGK	WLHGLESQIQSDDYGK	2	WLHGLESQIQSDDYGK2	30640.1	32119.8	29841.7
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	WLHGLESQIQSDDYGK	WLHGLESQIQSDDYGK	3	WLHGLESQIQSDDYGK3	391869	455835	439518
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	WLHGLESQIQSDDYGKDLTSVNILLK	WLHGLESQIQSDDYGKDLTSVNILLK	4	WLHGLESQIQSDDYGKDLTSVNILLK4	5578.58	10509.4	2835.29
Q9EQS0	Q9EQS0	TALDO_RAT	Taldo1	Transaldolase	1	WLHNEDQMAVEK	WLHNEDQMAVEK	2	WLHNEDQMAVEK2	2373.47	2554.4	
Q9EQS0	Q9EQS0	TALDO_RAT	Taldo1	Transaldolase	1	WLHNEDQMAVEK	WLHNEDQMAVEK	3	WLHNEDQMAVEK3	10918.5	12365.1	12990.4
Q05695	Q05695	L1CAM_RAT	L1cam	Neural cell adhesion molecule L1	1	WLHPSDPMPTDR	WLHPSDPMPTDR	3	WLHPSDPMPTDR3	77484.6	61511.6	65627.9
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	WLHQQTEK	WLHQQTEK	2	WLHQQTEK2	7709.09	17871.5	21680.9
Q566Q8	Q566Q8	CK068_RAT	Bles03	UPF0696 protein C11orf68 homolog	1	WLIHLAPGFK	WLIHLAPGFK	3	WLIHLAPGFK3	4030.58	2031.64	3291.06
P63074	P63074;A0A8I6G664	IF4E_RAT	Eif4e	Eukaryotic translation initiation factor 4E	0	WLITLNK	WLITLNK	2	WLITLNK2	78298.1	54076.4	59307.3
F7EZW5	F7EZW5	F7EZW5_RAT	Tmem161a	Transmembrane protein 161A	1	WLLCNGSLFR	WLLC(UniMod:4)NGSLFR	2	WLLC(UniMod:4)NGSLFR2	9540.91	6500.9	2686.8
P18163	P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	1	WLLDFASK	WLLDFASK	2	WLLDFASK2	12250.5	15282.2	14450
Q63060	Q63060	GLPK_RAT	Gk	Glycerol kinase	1	WLLDNVK	WLLDNVK	2	WLLDNVK2	22099.8	17431.9	26494.9
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	WLLELSK	WLLELSK	2	WLLELSK2	15191.4	18581.2	20014.6
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	WLLEVIPQQNGEK	WLLEVIPQQNGEK	2	WLLEVIPQQNGEK2		6723.57	14659
Q920F5	Q920F5	DCMC_RAT	Mlycd	Malonyl-CoA decarboxylase, mitochondrial	1	WLLGLLNVQGK	WLLGLLNVQGK	2	WLLGLLNVQGK2	6269.49	5655.71	9850.95
P58751	P58751	RELN_RAT	Reln	Reelin	1	WLLHPGGTK	WLLHPGGTK	2	WLLHPGGTK2	40114.6	38111.5	44188.7
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	WLLLCNPGLADLIAEK	WLLLC(UniMod:4)NPGLADLIAEK	2	WLLLC(UniMod:4)NPGLADLIAEK2	23074.8	21452.5	20153.2
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	WLLLCNPGLADLIAEK	WLLLC(UniMod:4)NPGLADLIAEK	3	WLLLC(UniMod:4)NPGLADLIAEK3	4981.11	4410.01	4068.5
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	WLLLDTDTR	WLLLDTDTR	2	WLLLDTDTR2	19759.8	19184.5	10587.4
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	WLLLTGISAQQNR	WLLLTGISAQQNR	2	WLLLTGISAQQNR2	421836	477920	419705
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	WLLLTGISAQQNR	WLLLTGISAQQNR	3	WLLLTGISAQQNR3	69154.1	72120.9	69653.1
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	WLLYLMK	WLLYLMK	1	WLLYLMK1	6260.27	6733.56	5800.36
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	WLLYLMK	WLLYLMK	2	WLLYLMK2	418416	416850	486710
A0A0G2K9R9	A0A0G2K9R9	A0A0G2K9R9_RAT	Psme4	Proteasome activator subunit 4	1	WLMASAGR	WLMASAGR	2	WLMASAGR2	6115.18	5258.61	
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	WLMLHTADSACDPNNK	WLMLHTADSAC(UniMod:4)DPNNK	3	WLMLHTADSAC(UniMod:4)DPNNK3	11222.4	13284.1	23118.2
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	WLMLHTADSACDPNNKR	WLMLHTADSAC(UniMod:4)DPNNKR	3	WLMLHTADSAC(UniMod:4)DPNNKR3	7588.92		2091.35
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	WLMLHTADSACDPNNKR	WLMLHTADSAC(UniMod:4)DPNNKR	4	WLMLHTADSAC(UniMod:4)DPNNKR4	12685.6	19621.4	16699.9
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	WLMVHVDKR	WLMVHVDKR	3	WLMVHVDKR3	5456.34	9376.14	5228.61
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	WLNALTK	WLNALTK	2	WLNALTK2	36262.3	32211.6	37188.1
P10760	P10760	SAHH_RAT	Ahcy	Adenosylhomocysteinase	1	WLNENAVEK	WLNENAVEK	2	WLNENAVEK2	15199.8	14890.3	14519.5
F1LQT4	F1LQT4	F1LQT4_RAT	Cpn2	Carboxypeptidase N subunit 2	1	WLNIQLSSR	WLNIQLSSR	2	WLNIQLSSR2	3.3665e+06	2.60372e+06	2.3357e+06
Q66H15	Q66H15	RMD3_RAT	Rmdn3	Regulator of microtubule dynamics protein 3	1	WLNLAQELPNITNEDSAFQK	WLNLAQELPNITNEDSAFQK	3	WLNLAQELPNITNEDSAFQK3	3983.57	13559.5	13262.6
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	WLNSHSGRPSTTNSPEQPSR	WLNSHSGRPSTTNSPEQPSR	4	WLNSHSGRPSTTNSPEQPSR4	12325.2	15163.7	16286.9
Q62847	Q62847	ADDG_RAT	Add3	Gamma-adducin	1	WLNSPNTYMK	WLNSPNTYMK	2	WLNSPNTYMK2	372348	356817	360220
P11730	P11730	KCC2G_RAT	Camk2g	Calcium/calmodulin-dependent protein kinase type II subunit gamma	1	WLNVHYHCSGAPAAPLQ	WLNVHYHC(UniMod:4)SGAPAAPLQ	2	WLNVHYHC(UniMod:4)SGAPAAPLQ2	6897.94		2266.45
P11730	P11730	KCC2G_RAT	Camk2g	Calcium/calmodulin-dependent protein kinase type II subunit gamma	1	WLNVHYHCSGAPAAPLQ	WLNVHYHC(UniMod:4)SGAPAAPLQ	3	WLNVHYHC(UniMod:4)SGAPAAPLQ3	41613.6	38794.1	29557.7
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	WLPAGDALLQMITIHLPSPVTAQK	WLPAGDALLQMITIHLPSPVTAQK	3	WLPAGDALLQMITIHLPSPVTAQK3	7542.37	5133.1	1594.48
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	WLPAGTGPQAFSR	WLPAGTGPQAFSR	2	WLPAGTGPQAFSR2	263213	264235	315524
Q5PQT2	Q5PQT2	MTMR3_RAT	Mtmr3	Myotubularin-related protein 3	1	WLPDHLAAHCYACDSAFWLASR	WLPDHLAAHC(UniMod:4)YAC(UniMod:4)DSAFWLASR	4	WLPDHLAAHC(UniMod:4)YAC(UniMod:4)DSAFWLASR4	7029.27	11713.2	5064.9
Q02253	Q02253	MMSA_RAT	Aldh6a1	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial	1	WLPELVER	WLPELVER	2	WLPELVER2	104759	107204	122350
Q91Y78	Q91Y78	UCHL3_RAT	Uchl3	Ubiquitin carboxyl-terminal hydrolase isozyme L3	1	WLPLEANPEVTNQFLK	WLPLEANPEVTNQFLK	2	WLPLEANPEVTNQFLK2	23405.4	27268.4	30115.4
Q91Y78	Q91Y78	UCHL3_RAT	Uchl3	Ubiquitin carboxyl-terminal hydrolase isozyme L3	1	WLPLEANPEVTNQFLK	WLPLEANPEVTNQFLK	3	WLPLEANPEVTNQFLK3	1967.07	5471.28	1828.22
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	WLPLGLGLNHLGK	WLPLGLGLNHLGK	2	WLPLGLGLNHLGK2	19983.1	17341.8	22114.7
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	WLPLGLGLNHLGK	WLPLGLGLNHLGK	3	WLPLGLGLNHLGK3	97047.8	88370.4	83154.6
P18163	O88813;P18163	ACSL1_RAT	Acsl1	Long-chain-fatty-acid--CoA ligase 1	0	WLPNGTLK	WLPNGTLK	2	WLPNGTLK2	69835.8	120390	116301
P08541	P19488;Q64550;P08542;P08430;Q64638;Q64637;P20720;Q64633;P36511;Q64634;P08541	UD2B2_RAT	Ugt2b	UDP-glucuronosyltransferase 2B2	0	WLPQNDLLGHPK	WLPQNDLLGHPK	3	WLPQNDLLGHPK3	26096.9	25185.3	20218.2
P56932	P56932	2ABD_RAT	Ppp2r2d	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform	1	WLPQQNAAHFLLSTNDK	WLPQQNAAHFLLSTNDK	3	WLPQQNAAHFLLSTNDK3	3362.06	2099.41	
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	WLPSTSPVTGYR	WLPSTSPVTGYR	2	WLPSTSPVTGYR2	464291	593861	561645
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	WLPSTSPVTGYR	WLPSTSPVTGYR	3	WLPSTSPVTGYR3	420335	441615	375096
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	WLPSTSPVTGYRVTTAPK	WLPSTSPVTGYRVTTAPK	3	WLPSTSPVTGYRVTTAPK3	92302.6	71334.3	150591
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	WLPSTSPVTGYRVTTAPKNGLGPTK	WLPSTSPVTGYRVTTAPKNGLGPTK	4	WLPSTSPVTGYRVTTAPKNGLGPTK4	2699.47	12163.1	7109.68
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	WLPTVIAASK	WLPTVIAASK	2	WLPTVIAASK2	87332.7	111251	91784.9
D3ZFK5	D3ZFK5	D3ZFK5_RAT	Spcs1	Signal peptidase complex subunit 1	1	WLPVQDSGTEDK	WLPVQDSGTEDK	2	WLPVQDSGTEDK2	270152	223136	261272
D3ZFK5	D3ZFK5	D3ZFK5_RAT	Spcs1	Signal peptidase complex subunit 1	1	WLPVQDSGTEDKK	WLPVQDSGTEDKK	2	WLPVQDSGTEDKK2	42356.7	30805.7	27768.6
D3ZFK5	D3ZFK5	D3ZFK5_RAT	Spcs1	Signal peptidase complex subunit 1	1	WLPVQDSGTEDKK	WLPVQDSGTEDKK	3	WLPVQDSGTEDKK3	150276	190218	194899
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	WLQATDLTR	WLQATDLTR	2	WLQATDLTR2	16815.4	6233.52	20917.8
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	WLQDEMFHADFQHHNK	WLQDEMFHADFQHHNK	3	WLQDEMFHADFQHHNK3	13829.8	8485.59	14323.5
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	WLQDEMFHADFQHHNK	WLQDEMFHADFQHHNK	4	WLQDEMFHADFQHHNK4	25846.5	29591.1	24626.4
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	WLQEAETTANVLADASQR	WLQEAETTANVLADASQR	3	WLQEAETTANVLADASQR3	40039.7	37533.7	37603.1
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	WLQEALSDSTHK	WLQEALSDSTHK	2	WLQEALSDSTHK2	2107.06	3061.91	
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	WLQEALSDSTHK	WLQEALSDSTHK	3	WLQEALSDSTHK3	16244.3	13378.5	14838.9
P84903	P84903;A0A8I6A6S4	STIM1_RAT	Stim1	Stromal interaction molecule 1	0	WLQLTHEVEVQYYNIK	WLQLTHEVEVQYYNIK	3	WLQLTHEVEVQYYNIK3	51668.2	50154.6	61425.1
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	WLQLTHEVEVQYYNIKK	WLQLTHEVEVQYYNIKK	4	WLQLTHEVEVQYYNIKK4	2121.38	2492.87	6374.63
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	WLQPDSYADPQK	WLQPDSYADPQK	2	WLQPDSYADPQK2	24222.7	20352	18367.4
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	WLQSTWISSANPNDR	WLQSTWISSANPNDR	2	WLQSTWISSANPNDR2	51785.7	55614.2	62615.9
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	WLQSTWISSANPNDR	WLQSTWISSANPNDR	3	WLQSTWISSANPNDR3	8004.57	8797.04	10643.2
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	WLSDELAGNADSWR	WLSDELAGNADSWR	2	WLSDELAGNADSWR2	1841.47	6200.85	
Q9QZL2	Q9QZL2	CHST3_RAT	Chst3	Carbohydrate sulfotransferase 3	1	WLSEGQDQLSENEVQR	WLSEGQDQLSENEVQR	2	WLSEGQDQLSENEVQR2	18867.9	14308.9	24051.8
Q9QZL2	Q9QZL2	CHST3_RAT	Chst3	Carbohydrate sulfotransferase 3	1	WLSEGQDQLSENEVQR	WLSEGQDQLSENEVQR	3	WLSEGQDQLSENEVQR3	16325.6	17764.9	17451
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	WLSMNVLMLDEK	WLSMNVLMLDEK	2	WLSMNVLMLDEK2	38715.4	68883.5	73143.2
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	WLSMNVLMLDEKR	WLSMNVLMLDEKR	3	WLSMNVLMLDEKR3	41898.8	42604.8	40119.1
Q3ZAU6	Q3ZAU6	Q3ZAU6_RAT	Rnf14	RBR-type E3 ubiquitin transferase	1	WLSPTQLSALCK	WLSPTQLSALC(UniMod:4)K	2	WLSPTQLSALC(UniMod:4)K2	17718.6	13704.9	18797.9
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	WLSSEIEETKPAK	WLSSEIEETKPAK	2	WLSSEIEETKPAK2	6240.99	1469.67	
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	WLSSEIEETKPAK	WLSSEIEETKPAK	3	WLSSEIEETKPAK3	34314.7	42287.8	31882.9
O88279	O88279	SLIT1_RAT	Slit1	Slit homolog 1 protein	1	WLSSWVK	WLSSWVK	2	WLSSWVK2	21684.1	10011.9	16229
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	WLSTSIPEAQWQSSLAR	WLSTSIPEAQWQSSLAR	3	WLSTSIPEAQWQSSLAR3	11759.9	14698.4	8458.42
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	WLSYPSGR	WLSYPSGR	2	WLSYPSGR2	24206.2	19378.1	19968
F2Z3T4	F2Z3T4;A0A0G2JX72;D3ZQV3	MBNL2_RAT	Mbnl2	Muscleblind-like protein 2	0	WLTLEVCR	WLTLEVC(UniMod:4)R	2	WLTLEVC(UniMod:4)R2	33312.2	26721.8	30252.5
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	WLTPFDPIFTEADTFHLDK	WLTPFDPIFTEADTFHLDK	3	WLTPFDPIFTEADTFHLDK3	38773.3	63890.2	54449.6
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	WLTPFDPIFTEADTFHLDK	WLTPFDPIFTEADTFHLDK	4	WLTPFDPIFTEADTFHLDK4	1587.67	1708.32	3375.83
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	WLTPFDPIFTEADTFHLDKYK	WLTPFDPIFTEADTFHLDKYK	3	WLTPFDPIFTEADTFHLDKYK3	136519	204183	214035
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	WLTPFDPIFTEADTFHLDKYK	WLTPFDPIFTEADTFHLDKYK	4	WLTPFDPIFTEADTFHLDKYK4	897204	1.05573e+06	798390
P97924	F1M0Z1;P97924	KALRN_RAT	Kalrn	Kalirin	0	WLTSPVR	WLTSPVR	2	WLTSPVR2	434500	423198	398333
Q63448	Q63448	ACOX3_RAT	Acox3	Peroxisomal acyl-coenzyme A oxidase 3	1	WLVCYLLR	WLVC(UniMod:4)YLLR	2	WLVC(UniMod:4)YLLR2	13453.6	21041.9	21545.3
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	WLVEYGR	WLVEYGR	2	WLVEYGR2		24638.4	19753.4
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	WLVIDHIPAAVPTVTGPK	WLVIDHIPAAVPTVTGPK	2	WLVIDHIPAAVPTVTGPK2	43777.5	40488.3	28810
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	WLVIDHIPAAVPTVTGPK	WLVIDHIPAAVPTVTGPK	3	WLVIDHIPAAVPTVTGPK3	109620	123260	92549.6
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	WLVLCNPGLAEVIAER	WLVLC(UniMod:4)NPGLAEVIAER	3	WLVLC(UniMod:4)NPGLAEVIAER3	1172.73		2407.39
D4A4R1	D4A4R1	D4A4R1_RAT	Eml3	EMAP like 3	1	WLVLDTETR	WLVLDTETR	2	WLVLDTETR2	19606.7	23227.9	13473.5
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	WLVQVPR	WLVQVPR	2	WLVQVPR2	371868	401047	340030
B5DF48	B5DF48	B5DF48_RAT	Tyw1	tRNA 4-demethylwyosine synthase (AdoMet-dependent)	1	WLWMLGAQR	WLWMLGAQR	2	WLWMLGAQR2	7133.98		5608.83
Q56AP7	Q56AP7	CRBN_RAT	Crbn	Protein cereblon	1	WLYSLYDAETLMDR	WLYSLYDAETLMDR	2	WLYSLYDAETLMDR2		1448.47	7113.58
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	WLYSNQIPASPNTPVPIYHSK	WLYSNQIPASPNTPVPIYHSK	3	WLYSNQIPASPNTPVPIYHSK3	4176.03	5029.94	1227.39
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	WLYVGTER	WLYVGTER	2	WLYVGTER2	50226.8	31277.4	51412.2
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	WMAGWLGGGSK	WMAGWLGGGSK	2	WMAGWLGGGSK2	27025.2	23865.9	31002.5
O35346	O35346	FAK1_RAT	Ptk2	Focal adhesion kinase 1	1	WMAPESINFR	WMAPESINFR	2	WMAPESINFR2	18201	20707.6	18358.4
Q5HZY2	Q5HZY2	SAR1B_RAT	Sar1b	GTP-binding protein SAR1b	1	WMAQYID	WMAQYID	1	WMAQYID1	5957.82	8555.06	10078.4
Q5HZY2	Q5HZY2	SAR1B_RAT	Sar1b	GTP-binding protein SAR1b	1	WMAQYID	WMAQYID	2	WMAQYID2	8357.1	9159.33	10137.6
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	WMDEAQALDTADR	WMDEAQALDTADR	2	WMDEAQALDTADR2	27928.2	43271.8	36875.8
Q63470	Q63470	DYR1A_RAT	Dyrk1a	Dual specificity tyrosine-phosphorylation-regulated kinase 1A	1	WMDRYEIDSLIGK	WMDRYEIDSLIGK	3	WMDRYEIDSLIGK3	8803.08	7164.55	4348.96
Q05695	Q05695	L1CAM_RAT	L1cam	Neural cell adhesion molecule L1	1	WMDWNAPQIQYR	WMDWNAPQIQYR	2	WMDWNAPQIQYR2	7248.98	2639.07	12412.2
G3V9D0	G3V9D0	PGLT1_RAT	Poglut1	Protein O-glucosyltransferase 1	1	WMEPTIPVFSFSK	WMEPTIPVFSFSK	2	WMEPTIPVFSFSK2			4958.66
P24473	P24473	GSTK1_RAT	Gstk1	Glutathione S-transferase kappa 1	1	WMGPVPPTLNAR	WMGPVPPTLNAR	2	WMGPVPPTLNAR2	70896.6	78452.3	79852.7
A0A8I6AC05	A0A8I6AC05	A0A8I6AC05_RAT	ENSRNOG00000070455	Ig-like domain-containing protein	1	WMGWINTNTGK	WMGWINTNTGK	2	WMGWINTNTGK2	14611.3	11540.3	17325.6
A0A8I6ABN8	A0A8I6ABN8	A0A8I6ABN8_RAT	ENSRNOG00000065459	Ig-like domain-containing protein	1	WMGWINTQTGK	WMGWINTQTGK	2	WMGWINTQTGK2	5622.87		8273.78
A0A8I6ABN8	A0A8I6ABN8	A0A8I6ABN8_RAT	ENSRNOG00000065459	Ig-like domain-containing protein	1	WMGWINTQTGKPTYADDFK	WMGWINTQTGKPTYADDFK	3	WMGWINTQTGKPTYADDFK3	112717	139099	127008
A0A8I6G1P7	A0A8I6G1P7	A0A8I6G1P7_RAT	ENSRNOG00000062657	Ig-like domain-containing protein	1	WMGWINTYTGK	WMGWINTYTGK	2	WMGWINTYTGK2	30727.7	20791.9	12889.6
A0A8I6G1P7	A0A8I6G1P7	A0A8I6G1P7_RAT	ENSRNOG00000062657	Ig-like domain-containing protein	1	WMGWINTYTGKPTYADDFK	WMGWINTYTGKPTYADDFK	3	WMGWINTYTGKPTYADDFK3	52216.8	51094.1	53873.3
A0A8I6G1P7	A0A8I6G1P7	A0A8I6G1P7_RAT	ENSRNOG00000062657	Ig-like domain-containing protein	1	WMGWINTYTGKPTYADDFKGR	WMGWINTYTGKPTYADDFKGR	4	WMGWINTYTGKPTYADDFKGR4	10309	6760	5756.87
P21913	P21913	SDHB_RAT	Sdhb	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial	1	WMIDSRDEFTEER	WMIDSRDEFTEER	3	WMIDSRDEFTEER3	42246.7	48978	51306.4
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	WMLEMTEGPCR	WMLEMTEGPC(UniMod:4)R	2	WMLEMTEGPC(UniMod:4)R2	13647.5	4687.17	8898.34
P13233	P13233	CN37_RAT	Cnp	2',3'-cyclic-nucleotide 3'-phosphodiesterase	1	WMLSLAK	WMLSLAK	2	WMLSLAK2	73112.2	77259	85137.5
A0A8I5ZPV1	A0A8I5ZPV1;A0A8I5ZW76	A0A8I5ZPV1_RAT	Tbc1d22a	TBC1 domain family, member 22a	0	WMNNLLMR	WMNNLLMR	2	WMNNLLMR2	12200.3	13492.3	8991.06
O08679	O08679	MARK2_RAT	Mark2	Serine/threonine-protein kinase MARK2	1	WMNVGHEDDELKPYVEPLPDYKDPR	WMNVGHEDDELKPYVEPLPDYKDPR	4	WMNVGHEDDELKPYVEPLPDYKDPR4	3887.05	7658.49	
P36953	P36953	AFAM_RAT	Afm	Afamin	1	WMPEITDEER	WMPEITDEER	2	WMPEITDEER2	356369	262341	256228
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	WMSPESINFR	WMSPESINFR	2	WMSPESINFR2	86401.8	93259.2	79603.7
F7FG85	F7FG85	F7FG85_RAT	Man2b1	Alpha-mannosidase	1	WMTDTGPISYPAPSR	WMTDTGPISYPAPSR	2	WMTDTGPISYPAPSR2	13418.9	11415.7	11778
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	WMYPYTVLLGHEGK	WMYPYTVLLGHEGK	3	WMYPYTVLLGHEGK3		4150.93	8772.91
Q9Z2K5	Q9Z2K5	LST8_RAT	Mlst8	Target of rapamycin complex subunit LST8	1	WMYTGGEDCTAR	WMYTGGEDC(UniMod:4)TAR	2	WMYTGGEDC(UniMod:4)TAR2	19527.5	14755.7	8678.49
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	WNAEELAR	WNAEELAR	2	WNAEELAR2	11925.1	10854.8	8896.8
D3ZXD8	D3ZXD8	TM245_RAT	Tmem245	Transmembrane protein 245	1	WNASTQHYLR	WNASTQHYLR	3	WNASTQHYLR3		3534.84	5360.07
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	WNDEPCFK	WNDEPC(UniMod:4)FK	2	WNDEPC(UniMod:4)FK2	235883	234486	238088
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	WNDEPCFKR	WNDEPC(UniMod:4)FKR	3	WNDEPC(UniMod:4)FKR3	17404.8	29612.7	19176
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	WNDFAEDSLR	WNDFAEDSLR	2	WNDFAEDSLR2	84017.1	79449.7	93614.6
A0A8I6ANU2	A0A8I6ANU2	A0A8I6ANU2_RAT	Ptcd3	Pentatricopeptide repeat domain 3	1	WNDILDLLR	WNDILDLLR	2	WNDILDLLR2	1656.97	2260.48	
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	WNDNCPSWNTVDPEVR	WNDNC(UniMod:4)PSWNTVDPEVR	3	WNDNC(UniMod:4)PSWNTVDPEVR3	503974	631049	628844
D4A7F6	D4A7F6	D4A7F6_RAT	Colec10	Collectin subfamily member 10	1	WNDTECHLTMYFVCEFVK	WNDTEC(UniMod:4)HLTMYFVC(UniMod:4)EFVK	3	WNDTEC(UniMod:4)HLTMYFVC(UniMod:4)EFVK3	9812.08	10821.1	7194.1
Q793F9	Q793F9	VPS4A_RAT	Vps4a	Vacuolar protein sorting-associated protein 4A	1	WNDVAGLEGAK	WNDVAGLEGAK	2	WNDVAGLEGAK2	16838.7	14352.9	15438.3
Q62940	Q62940	NEDD4_RAT	Nedd4	E3 ubiquitin-protein ligase NEDD4	1	WNEEILFR	WNEEILFR	2	WNEEILFR2	125873	171255	132598
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	WNEEVEAYR	WNEEVEAYR	2	WNEEVEAYR2	549229	565726	393599
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	WNEEVEAYR	WNEEVEAYR	3	WNEEVEAYR3	42745.7	41715.8	43992.9
P04639	P04639	APOA1_RAT	Apoa1	Apolipoprotein A-I	1	WNEEVEAYRQK	WNEEVEAYRQK	3	WNEEVEAYRQK3	34887.1	26049.2	41792.8
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	WNFDNRPLILHGEYIEFICK	WNFDNRPLILHGEYIEFIC(UniMod:4)K	4	WNFDNRPLILHGEYIEFIC(UniMod:4)K4	13686.7	14539.4	7777.34
P23764	P23764	GPX3_RAT	Gpx3	Glutathione peroxidase 3	1	WNFEKFLVGPDGIPIMR	WNFEKFLVGPDGIPIMR	3	WNFEKFLVGPDGIPIMR3	1669.79	5683.01	10007.7
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	WNFTTPR	WNFTTPR	2	WNFTTPR2	133984	131505	128249
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	WNFTTPRDEYIEQLK	WNFTTPRDEYIEQLK	3	WNFTTPRDEYIEQLK3	23133.5	48052.3	49388.4
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	WNILEFDEPTENDAQCLTR	WNILEFDEPTENDAQC(UniMod:4)LTR	3	WNILEFDEPTENDAQC(UniMod:4)LTR3	14030.2	8937.46	11127.5
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	WNILEFDEPTENDAQCLTRPYYSDVDVTR	WNILEFDEPTENDAQC(UniMod:4)LTRPYYSDVDVTR	4	WNILEFDEPTENDAQC(UniMod:4)LTRPYYSDVDVTR4	109012	94155.8	97447
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	WNLPVYFQIR	WNLPVYFQIR	2	WNLPVYFQIR2	12249.2	10758.1	14167.2
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	WNPGASPSDTGDVSIHSGIIAAR	WNPGASPSDTGDVSIHSGIIAAR	3	WNPGASPSDTGDVSIHSGIIAAR3	9260.81	15414.1	7377.54
A0A8J8Y4N8	D4A453;A0A8J8Y4N8	A0A8J8Y4N8_RAT	Ube2r2	Ubiquitin-conjugating enzyme E2R 2	0	WNPTQNVR	WNPTQNVR	2	WNPTQNVR2	83308	105904	107748
A8WCF8	A8WCF8	TPRGL_RAT	Tprg1l	Tumor protein p63-regulated gene 1-like protein	1	WNPWSTNMPYATFIEHPMAGMDEK	WNPWSTNMPYATFIEHPMAGMDEK	3	WNPWSTNMPYATFIEHPMAGMDEK3	37742.7	25972.5	39587.3
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	WNSPAEEGSSDCEVFPK	WNSPAEEGSSDC(UniMod:4)EVFPK	2	WNSPAEEGSSDC(UniMod:4)EVFPK2	267742	273764	292394
O88600	O88600	HSP74_RAT	Hspa4	Heat shock 70 kDa protein 4	1	WNSPAEEGSSDCEVFPK	WNSPAEEGSSDC(UniMod:4)EVFPK	3	WNSPAEEGSSDC(UniMod:4)EVFPK3	58154.3	52787.8	42888.7
Q4KSH6	Q4KSH6	Q4KSH6_RAT	Map2k4	Dual specificity mitogen-activated protein kinase kinase 4	1	WNSVFDQLTQVVK	WNSVFDQLTQVVK	2	WNSVFDQLTQVVK2	3355.56	7781.3	6959.07
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	WNSVFPK	WNSVFPK	2	WNSVFPK2	5145.08	11061.7	9402.06
P81155	P81155	VDAC2_RAT	Vdac2	Voltage-dependent anion-selective channel protein 2	1	WNTDNTLGTEIAIEDQICQGLK	WNTDNTLGTEIAIEDQIC(UniMod:4)QGLK	3	WNTDNTLGTEIAIEDQIC(UniMod:4)QGLK3	18859.2		9070.84
Q9R1Z0	Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	1	WNTDNTLGTEISWENK	WNTDNTLGTEISWENK	2	WNTDNTLGTEISWENK2	141601	127279	129366
Q9R1Z0	Q9R1Z0	VDAC3_RAT	Vdac3	Voltage-dependent anion-selective channel protein 3	1	WNTDNTLGTEISWENK	WNTDNTLGTEISWENK	3	WNTDNTLGTEISWENK3	28815.4	23890.2	34659.4
Q9Z2L0	Q9Z2L0	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	1	WNTDNTLGTEITVEDQLAR	WNTDNTLGTEITVEDQLAR	3	WNTDNTLGTEITVEDQLAR3	63702.1	54684.3	51800.6
Q923V8	Q923V8	SEP15_RAT	Selenof	Selenoprotein F	1	WNTDSVEEFLSEK	WNTDSVEEFLSEK	2	WNTDSVEEFLSEK2	39050.1	46068.3	60163.5
Q923V8	Q923V8	SEP15_RAT	Selenof	Selenoprotein F	1	WNTDSVEEFLSEK	WNTDSVEEFLSEK	3	WNTDSVEEFLSEK3	2514.02		4309.99
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	WNTIPLR	WNTIPLR	2	WNTIPLR2	10111.4	6547.23	7117.43
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	WNTQNSDGQELTTATLLMK	WNTQNSDGQELTTATLLMK	3	WNTQNSDGQELTTATLLMK3	3847.76	2020.9	
D3ZXK7	D3ZXK7	RN123_RAT	Rnf123	E3 ubiquitin-protein ligase RNF123	1	WNVTTTNYGK	WNVTTTNYGK	2	WNVTTTNYGK2	6662.81	6606.08	6640.98
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	WNWNEWLK	WNWNEWLK	2	WNWNEWLK2	8765.95		4597.58
A0A8J8YPH6	A0A8J8YPH6	A0A8J8YPH6_RAT	Hps4	HPS4, biogenesis of lysosomal organelles complex 3 subunit 2	1	WNYFFLYDGSK	WNYFFLYDGSK	2	WNYFFLYDGSK2	11423.9	18078.6	9742.01
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	WPCNPEK	WPC(UniMod:4)NPEK	2	WPC(UniMod:4)NPEK2	68571.6	46710.5	20767.6
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	WPDFNQEAYVGGTMVR	WPDFNQEAYVGGTMVR	2	WPDFNQEAYVGGTMVR2	44140.2	26239.7	37626.1
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	WPDFNQEAYVGGTMVR	WPDFNQEAYVGGTMVR	3	WPDFNQEAYVGGTMVR3	18473.6	18404.6	23930
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	WPEPVFGR	WPEPVFGR	2	WPEPVFGR2	298661	225888	263797
Q920E0	Q920E0	PAR4_RAT	F2rl3	Proteinase-activated receptor 4	1	WPFGEAACR	WPFGEAAC(UniMod:4)R	2	WPFGEAAC(UniMod:4)R2	109455	116758	99700.9
Q8K4V4	Q8K4V4	SNX27_RAT	Snx27	Sorting nexin-27	1	WPFSLSEQQLDAR	WPFSLSEQQLDAR	2	WPFSLSEQQLDAR2	5396.02	6140.48	3788.65
Q5XHY5	Q5XHY5	SYTC_RAT	Tars1	Threonine--tRNA ligase 1, cytoplasmic	1	WPFWLSPR	WPFWLSPR	2	WPFWLSPR2	12462.9	18355.2	12528.9
P15589	P15589	STS_RAT	Sts	Steryl-sulfatase	1	WPGVIVPGQEVEEPTSNMDVFPTVAR	WPGVIVPGQEVEEPTSNMDVFPTVAR	3	WPGVIVPGQEVEEPTSNMDVFPTVAR3		4916.41	3768.27
Q32KK0	Q32KK0	Q32KK0_RAT	Arsl	Arylsulfatase E	1	WPGVLPR	WPGVLPR	2	WPGVLPR2	13516.3		19104.3
A0A0G2K3D9	A0A0G2K3D9	A0A0G2K3D9_RAT	Tmem132b	Transmembrane protein 132B	1	WPIVVAEGEGQGPLIK	WPIVVAEGEGQGPLIK	2	WPIVVAEGEGQGPLIK2		3350.32	1267.94
B2RYP8	B2RYP8	B2RYP8_RAT	Tubgcp2	Gamma-tubulin complex component	1	WPLSLIINR	WPLSLIINR	2	WPLSLIINR2	1106.46	2573.79	2461.37
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	WPLYLSTK	WPLYLSTK	2	WPLYLSTK2	16102	14412	15267
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	WPPEDEVCK	WPPEDEVC(UniMod:4)K	2	WPPEDEVC(UniMod:4)K2	34712	21117.7	20329.9
P37136	P37136	ACES_RAT	Ache	Acetylcholinesterase	1	WPPYTTAAQQYVSLNLKPLEVR	WPPYTTAAQQYVSLNLKPLEVR	3	WPPYTTAAQQYVSLNLKPLEVR3	76027.8	61865.1	80185.3
P20611	P20611	PPAL_RAT	Acp2	Lysosomal acid phosphatase	1	WPQGFGQLTK	WPQGFGQLTK	2	WPQGFGQLTK2	28684.9	31081.8	29285.8
Q1HAQ0	Q1HAQ0	PCAT1_RAT	Lpcat1	Lysophosphatidylcholine acyltransferase 1	1	WPQIMIFPEGTCTNR	WPQIMIFPEGTC(UniMod:4)TNR	2	WPQIMIFPEGTC(UniMod:4)TNR2	46515.2	37712.9	44076.1
Q1HAQ0	Q1HAQ0	PCAT1_RAT	Lpcat1	Lysophosphatidylcholine acyltransferase 1	1	WPQIMIFPEGTCTNR	WPQIMIFPEGTC(UniMod:4)TNR	3	WPQIMIFPEGTC(UniMod:4)TNR3		3605.29	13337.9
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	WPSEASGK	WPSEASGK	2	WPSEASGK2	11624.5	9543.98	13609.3
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	WPSMWYMHCSDNTHPCQSDMNIEGAWK	WPSMWYMHC(UniMod:4)SDNTHPC(UniMod:4)QSDMNIEGAWK	4	WPSMWYMHC(UniMod:4)SDNTHPC(UniMod:4)QSDMNIEGAWK4	19086.5	18153.3	37053.3
D3ZBM3	D3ZBM3	D3ZBM3_RAT	Fech	Ferrochelatase	1	WPTHPLLIQCFADHILKELDHFPEEKR	WPTHPLLIQC(UniMod:4)FADHILKELDHFPEEKR	4	WPTHPLLIQC(UniMod:4)FADHILKELDHFPEEKR4		7857.54	
Q0PMD2	Q0PMD2;A0A8I6A282	ANTR1_RAT	Antxr1	Anthrax toxin receptor 1	0	WPTVDASYYGGR	WPTVDASYYGGR	2	WPTVDASYYGGR2	11345.9	9796.77	9207.43
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	WPVDLVEK	WPVDLVEK	2	WPVDLVEK2	163747	132144	131741
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	WPVHLMETLLPR	WPVHLMETLLPR	3	WPVHLMETLLPR3	27587	11686.3	16506.9
P53534	P53534	PYGB_RAT	Pygb	Glycogen phosphorylase, brain form (Fragment)	1	WPVSMFEK	WPVSMFEK	2	WPVSMFEK2	11933.7	12339.1	7945.65
Q6AY30	Q6AY30	SCPDL_RAT	Sccpdh	Saccharopine dehydrogenase-like oxidoreductase	1	WPVSYCR	WPVSYC(UniMod:4)R	2	WPVSYC(UniMod:4)R2	33592.9	27556.4	34823.6
Q5XI67	Q5XI67	FBX30_RAT	Fbxo30	F-box only protein 30	1	WPVSYSDR	WPVSYSDR	2	WPVSYSDR2	58884.4	46450.4	28222.6
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	WPVVGVR	WPVVGVR	2	WPVVGVR2	57248	36873.8	48021.1
Q05511	P50343;P27435;D4AEK6;Q05511;D3ZXU4;A0A0G2K036;P83748;A0A8I6A055	HEPS_RAT	Hpn	Serine protease hepsin	0	WPWQVSLR	WPWQVSLR	2	WPWQVSLR2	9166.73	12770.2	12866.1
P56571	P56571	ES1_RAT		ES1 protein homolog, mitochondrial	1	WPYAGTAEAVK	WPYAGTAEAVK	2	WPYAGTAEAVK2	14514.1		6262.17
A0A8I6AWM3	A0A8I6AWM3	A0A8I6AWM3_RAT	Sptb	Spectrin beta chain	1	WQAFQAVVSEQR	WQAFQAVVSEQR	2	WQAFQAVVSEQR2	26195.4	19440	33533.2
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	WQAHCLTLHIYR	WQAHC(UniMod:4)LTLHIYR	3	WQAHC(UniMod:4)LTLHIYR3	5678.69	6061.32	
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	WQALADQQEK	WQALADQQEK	2	WQALADQQEK2	793681	830692	859572
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	WQALLVQIR	WQALLVQIR	2	WQALLVQIR2	119597	152315	122619
Q5U2M6	Q5U2M6	DCAF8_RAT	Dcaf8	DDB1- and CUL4-associated factor 8	1	WQALPALR	WQALPALR	2	WQALPALR2	22227.3	17095.5	19546.6
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	WQASSLPADDLCTENAIMLK	WQASSLPADDLC(UniMod:4)TENAIMLK	3	WQASSLPADDLC(UniMod:4)TENAIMLK3	46453.6	45218.8	48230
P30427	P30427	PLEC_RAT	Plec	Plectin	1	WQAVLAQTDVR	WQAVLAQTDVR	2	WQAVLAQTDVR2	5436.44	1839.9	3018.21
A0A8I5ZWP3	A0A8I5ZWP3;Q9QYE7	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	0	WQCEATLHGEQGHPWGR	WQC(UniMod:4)EATLHGEQGHPWGR	3	WQC(UniMod:4)EATLHGEQGHPWGR3	35514.8	29378.4	35753.3
A0A8I5ZWP3	A0A8I5ZWP3;Q9QYE7	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	0	WQCEATLHGEQGHPWGR	WQC(UniMod:4)EATLHGEQGHPWGR	4	WQC(UniMod:4)EATLHGEQGHPWGR4	81496.3	109333	89108.5
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	WQDAQATLQK	WQDAQATLQK	2	WQDAQATLQK2	171438	202530	215922
Q3L7M0	Q3L7M0;E9PTA3	GGTA1_RAT	Ggta1	N-acetyllactosaminide alpha-1,3-galactosyltransferase	0	WQDISMMR	WQDISMMR	2	WQDISMMR2	10948.8	6028.63	10803.2
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	WQEVDERPR	WQEVDERPR	3	WQEVDERPR3	102406	115042	112182
D4A5F4	D4A5F4	D4A5F4_RAT	Cracd	Capping protein inhibiting regulator of actin dynamics	1	WQEVDERPRPYTFQVSSGSR	WQEVDERPRPYTFQVSSGSR	4	WQEVDERPRPYTFQVSSGSR4	100652	94416.8	102267
Q03343	Q03343	ADCY6_RAT	Adcy6	Adenylate cyclase type 6	1	WQFDVWSNDVTLANHMEAGGR	WQFDVWSNDVTLANHMEAGGR	3	WQFDVWSNDVTLANHMEAGGR3	29650.4	36353.5	29548.1
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	WQFHSIGLILK	WQFHSIGLILK	3	WQFHSIGLILK3		4503.31	
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	WQFLTLR	WQFLTLR	2	WQFLTLR2	24957.8	33976.4	32397.9
B2GV22	B2GV22	PTSS2_RAT	Ptdss2	Phosphatidylserine synthase 2	1	WQGLWNIPTYK	WQGLWNIPTYK	2	WQGLWNIPTYK2	6913.86	9178.15	12836.4
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	WQGNDIVVK	WQGNDIVVK	2	WQGNDIVVK2	811769	730311	804555
D3ZG75	D3ZG75	D3ZG75_RAT	Als2cl	ALS2 C-terminal like	1	WQGVYSPFR	WQGVYSPFR	2	WQGVYSPFR2			6147.18
M0RBB1	M0RBB1	M0RBB1_RAT	Alyref	Aly/REF export factor	1	WQHDLFDSGFGGGAGVETGGK	WQHDLFDSGFGGGAGVETGGK	3	WQHDLFDSGFGGGAGVETGGK3	13796.4		
A0A8I5ZJB9	A0A8I5ZJB9	A0A8I5ZJB9_RAT	Syne1	Spectrin repeat containing, nuclear envelope 1	1	WQHLLDLMAAR	WQHLLDLMAAR	3	WQHLLDLMAAR3	2124.48	1724.31	519.074
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	WQIGEQEFEALMR	WQIGEQEFEALMR	2	WQIGEQEFEALMR2	84760	136844	80195.6
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	WQIGEQEFEALMR	WQIGEQEFEALMR	3	WQIGEQEFEALMR3	4052.67	8806.39	1437.6
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	WQINIACVK	WQINIAC(UniMod:4)VK	2	WQINIAC(UniMod:4)VK2	1.50579e+07	1.88998e+07	1.92607e+07
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	WQINIACVKK	WQINIAC(UniMod:4)VKK	2	WQINIAC(UniMod:4)VKK2	14023.2	19492.5	30301.4
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	WQINIACVKK	WQINIAC(UniMod:4)VKK	3	WQINIAC(UniMod:4)VKK3	265947	356933	373741
A0A8I6GM04	A0A0G2K988;A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	0	WQIYCSK	WQIYC(UniMod:4)SK	2	WQIYC(UniMod:4)SK2	99812	96247.9	84547.2
D3ZLK1	D3ZLK1	D3ZLK1_RAT	Gcsam	Germinal center-associated, signaling and motility	1	WQLDMQETPWNLR	WQLDMQETPWNLR	2	WQLDMQETPWNLR2	20332.5	23608.2	22028.6
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	WQLNPGMYQHQTVIADQFIVCLR	WQLNPGMYQHQTVIADQFIVC(UniMod:4)LR	3	WQLNPGMYQHQTVIADQFIVC(UniMod:4)LR3		3684.42	1884.06
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	WQLVGITSWGEGCAR	WQLVGITSWGEGC(UniMod:4)AR	2	WQLVGITSWGEGC(UniMod:4)AR2	102965	111100	85895.8
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	WQLVGITSWGEGCAR	WQLVGITSWGEGC(UniMod:4)AR	3	WQLVGITSWGEGC(UniMod:4)AR3	21861	13296.3	14779.9
B2RYF6	B2RYF6	B2RYF6_RAT	Clptm1	CLPTM1 regulator of GABA type A receptor forward trafficking	1	WQLYAAQSTK	WQLYAAQSTK	2	WQLYAAQSTK2	8786.15	7871.42	8520.11
Q641Y8	Q641Y8	DDX1_RAT	Ddx1	ATP-dependent RNA helicase DDX1	1	WQMNPYDR	WQMNPYDR	2	WQMNPYDR2	25342.3	14498.2	27860.1
Q4G002	A0A0G2KA93;Q4G002	Q4G002_RAT	RT1-T24-4	Histocompatibility 2, T region locus 24	0	WQNNEYWLER	WQNNEYWLER	2	WQNNEYWLER2	24447.7	33525.1	30402.4
P62246	D3ZLL8;A0A0G2K6I0;P62246;D3ZZC7	RS15A_RAT	Rps15a	Small ribosomal subunit protein uS8	0	WQNNLLPSR	WQNNLLPSR	2	WQNNLLPSR2	31810.1	20057	13629.6
Q641Y2	Q641Y2	NDUS2_RAT	Ndufs2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	1	WQPDIEWAEQFSGAVMYPSK	WQPDIEWAEQFSGAVMYPSK	3	WQPDIEWAEQFSGAVMYPSK3		9211.73	8332.96
P20759	P20759	IGHG1_RAT		Ig gamma-1 chain C region	1	WQQGNTFTCSVLHEGLHNHHTEK	WQQGNTFTC(UniMod:4)SVLHEGLHNHHTEK	3	WQQGNTFTC(UniMod:4)SVLHEGLHNHHTEK3	43190	28600.9	13734.6
P20759	P20759	IGHG1_RAT		Ig gamma-1 chain C region	1	WQQGNTFTCSVLHEGLHNHHTEK	WQQGNTFTC(UniMod:4)SVLHEGLHNHHTEK	4	WQQGNTFTC(UniMod:4)SVLHEGLHNHHTEK4	295103	246446	179069
A1L1J9	A1L1J9	LMF2_RAT	Lmf2	Lipase maturation factor 2	1	WQQLWETPTILWEAPR	WQQLWETPTILWEAPR	3	WQQLWETPTILWEAPR3	32298.7	40659.8	25902.1
D3ZHV2	D3ZHV2;A0A8I5ZQD4	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	0	WQQVWLLALER	WQQVWLLALER	2	WQQVWLLALER2	20814.3	25380	12748.3
A0A8I6AEF2	A0A8I6AEF2	A0A8I6AEF2_RAT	Heg1	Heart development protein with EGF-like domains 1	1	WQSDAPSFGGHQLASSSEAGNGR	WQSDAPSFGGHQLASSSEAGNGR	3	WQSDAPSFGGHQLASSSEAGNGR3	13026.8	15770.3	8604.49
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	WQSEAEDAMQGK	WQSEAEDAMQGK	2	WQSEAEDAMQGK2	8034.6		8213.47
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	WQSEEAEAEAEEAPR	WQSEEAEAEAEEAPR	2	WQSEEAEAEAEEAPR2	25030.9	26905.1	14108.5
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	WQSEEAEAEAEEAPR	WQSEEAEAEAEEAPR	3	WQSEEAEAEAEEAPR3	10075	12463.2	10004.7
Q9JLH7	Q9JLH7	CK5P3_RAT	Cdk5rap3	CDK5 regulatory subunit-associated protein 3	1	WQSLVLTIR	WQSLVLTIR	2	WQSLVLTIR2	14247.9	14741.3	15863.2
Q5M872	Q5M872	DPEP2_RAT	Dpep2	Dipeptidase 2	1	WQSPLEDMIPEEQLDSACHSVLPHR	WQSPLEDMIPEEQLDSAC(UniMod:4)HSVLPHR	4	WQSPLEDMIPEEQLDSAC(UniMod:4)HSVLPHR4	9703.48	11569.4	11990.2
G3V912	G3V912	G3V912_RAT	Tmx4	Thioredoxin-related transmembrane protein 4	1	WQSVEPLTGWK	WQSVEPLTGWK	2	WQSVEPLTGWK2	21383.6	16935.2	18818.5
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	WRCDADADCMDGSDEEACGTGVR	WRC(UniMod:4)DADADC(UniMod:4)MDGSDEEAC(UniMod:4)GTGVR	3	WRC(UniMod:4)DADADC(UniMod:4)MDGSDEEAC(UniMod:4)GTGVR3	6271.52	3995.41	5983.84
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	WRCDGDTDCMDSSDEK	WRC(UniMod:4)DGDTDC(UniMod:4)MDSSDEK	3	WRC(UniMod:4)DGDTDC(UniMod:4)MDSSDEK3	10507.6	7452.97	8973.33
F1M171	F1M171	F1M171_RAT	Leg1	Similar to RIKEN cDNA 2310057J18	1	WRDFFQYMQLPSSDFDGLLK	WRDFFQYMQLPSSDFDGLLK	3	WRDFFQYMQLPSSDFDGLLK3	4270.23		10932.3
Q5XI41	Q5XI41	TRAM1_RAT	Tram1	Translocating chain-associated membrane protein 1	1	WREHSAFQAPPVK	WREHSAFQAPPVK	4	WREHSAFQAPPVK4	18400.5	23404.6	19842.4
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	WRGQYDVAIK	WRGQYDVAIK	3	WRGQYDVAIK3			7035.33
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	WRPIASDDIVPGDIVSIGR	WRPIASDDIVPGDIVSIGR	3	WRPIASDDIVPGDIVSIGR3	44231.8	35064.5	40327
Q05695	Q05695	L1CAM_RAT	L1cam	Neural cell adhesion molecule L1	1	WRPVDLAQVK	WRPVDLAQVK	3	WRPVDLAQVK3	30971.9	35964.2	28818.7
A0A0G2JYM7	A0A0G2JYM7	A0A0G2JYM7_RAT	Vwce	von Willebrand factor C and EGF domains	1	WRQPGCSQCLCQDGEVTCGEVR	WRQPGC(UniMod:4)SQC(UniMod:4)LC(UniMod:4)QDGEVTC(UniMod:4)GEVR	3	WRQPGC(UniMod:4)SQC(UniMod:4)LC(UniMod:4)QDGEVTC(UniMod:4)GEVR3	25703.7	44273.9	41022.2
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	WRRPHETGGYMLECLCLGNGK	WRRPHETGGYMLEC(UniMod:4)LC(UniMod:4)LGNGK	4	WRRPHETGGYMLEC(UniMod:4)LC(UniMod:4)LGNGK4	5723.38	17545.4	9613.65
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	WRSLQQLAEER	WRSLQQLAEER	3	WRSLQQLAEER3		5095.7	
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	WRTEIENDTR	WRTEIENDTR	3	WRTEIENDTR3	13304.3		
Q08163	Q08163	CAP1_RAT	Cap1	Adenylyl cyclase-associated protein 1	1	WRVENQENVSNLVIDDTELK	WRVENQENVSNLVIDDTELK	3	WRVENQENVSNLVIDDTELK3	89882.4	88160	86901.3
Q5M9F8	Q5M9F8	SCYL1_RAT	Scyl1	N-terminal kinase-like protein	1	WSADMWR	WSADMWR	2	WSADMWR2	15095.2	24127.9	19401.6
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	WSAHVMEVYSWK	WSAHVMEVYSWK	3	WSAHVMEVYSWK3	3964.8		7844.75
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	WSALVAEVK	WSALVAEVK	2	WSALVAEVK2	217462	204563	185608
P63144	P63144	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	1	WSAMEIMEAYSVAR	WSAMEIMEAYSVAR	2	WSAMEIMEAYSVAR2	12655.2	18354.2	26084.3
P63144	P63144	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	1	WSAMEIMEAYSVAR	WSAMEIMEAYSVAR	3	WSAMEIMEAYSVAR3	1908.61	5353.56	3487.55
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	WSAPPPTCK	WSAPPPTC(UniMod:4)K	2	WSAPPPTC(UniMod:4)K2	267499	263059	282027
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	WSCGQSYGEVTHK	WSC(UniMod:4)GQSYGEVTHK	2	WSC(UniMod:4)GQSYGEVTHK2	1921.11	6266.59	3337.57
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	WSCGQSYGEVTHK	WSC(UniMod:4)GQSYGEVTHK	3	WSC(UniMod:4)GQSYGEVTHK3	41368.1	43759.1	47190.1
O35142	O35142	COPB2_RAT	Copb2	Coatomer subunit beta'	1	WSCSQVFEGHTHYVMQIVINPK	WSC(UniMod:4)SQVFEGHTHYVMQIVINPK	4	WSC(UniMod:4)SQVFEGHTHYVMQIVINPK4	9550.24	14706.5	11749.5
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	WSCWSDWSPCSGGR	WSC(UniMod:4)WSDWSPC(UniMod:4)SGGR	2	WSC(UniMod:4)WSDWSPC(UniMod:4)SGGR2	75719.4	79579.8	92682.9
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	WSCWSSWSECR	WSC(UniMod:4)WSSWSEC(UniMod:4)R	2	WSC(UniMod:4)WSSWSEC(UniMod:4)R2	7692.25	12526.4	6036.95
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	WSDAQQFCK	WSDAQQFC(UniMod:4)K	2	WSDAQQFC(UniMod:4)K2	30352.9	32876.9	47860
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	WSDEGIFLLASQPVDK	WSDEGIFLLASQPVDK	2	WSDEGIFLLASQPVDK2	22831.6	13811.2	11994.7
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	WSDGHSLQFEK	WSDGHSLQFEK	3	WSDGHSLQFEK3	12225	16052.7	12006.7
F7ESI5	F7ESI5	F7ESI5_RAT	Cfhr1	Complement factor H-related 1	1	WSDPPTCLHACVIPEDILEK	WSDPPTC(UniMod:4)LHAC(UniMod:4)VIPEDILEK	3	WSDPPTC(UniMod:4)LHAC(UniMod:4)VIPEDILEK3	82742.5	51762.7	61270.5
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	WSDTSPHVPK	WSDTSPHVPK	2	WSDTSPHVPK2	126930	101771	96794
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	WSDTSPHVPK	WSDTSPHVPK	3	WSDTSPHVPK3	1.25259e+06	1.1201e+06	1.28159e+06
A0A8I6GH80	A0A8I6GH80	A0A8I6GH80_RAT	Vps4b	vesicle-fusing ATPase	1	WSDVAGLEGAK	WSDVAGLEGAK	2	WSDVAGLEGAK2	26917.9	26076.3	31424.3
Q06000	Q06000	LIPL_RAT	Lpl	Lipoprotein lipase	1	WSDWWSSPSFVIEK	WSDWWSSPSFVIEK	2	WSDWWSSPSFVIEK2	14952.7	13437.9	7714.45
Q5PQM0	Q5PQM0	TM168_RAT	Tmem168	Transmembrane protein 168	1	WSDYTLHLPTGSDVAK	WSDYTLHLPTGSDVAK	3	WSDYTLHLPTGSDVAK3	15562.4	21261.1	14441.3
F7FPK8	F7FPK8	F7FPK8_RAT	Lman2	Lectin, mannose-binding 2	1	WSELAGCTADFR	WSELAGC(UniMod:4)TADFR	2	WSELAGC(UniMod:4)TADFR2	76277.3	49728.4	71559.8
Q925N6	Q925N6	IGSF1_RAT	Igsf1	Immunoglobulin superfamily member 1	1	WSEPSAPLELVIK	WSEPSAPLELVIK	2	WSEPSAPLELVIK2	18795.2	20228.2	21159
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	WSEQTPHR	WSEQTPHR	2	WSEQTPHR2	240719	144060	148625
Q66HF2	Q66HF2	TM9S1_RAT	Tm9sf1	Transmembrane 9 superfamily member 1	1	WSETSVEHR	WSETSVEHR	2	WSETSVEHR2	1495.43	1259.85	
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	WSFGTTLWEICSGGDKPLSALDSQR	WSFGTTLWEIC(UniMod:4)SGGDKPLSALDSQR	3	WSFGTTLWEIC(UniMod:4)SGGDKPLSALDSQR3	22497.3	14324.8	13132.9
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	WSFMNKPSDGRPK	WSFMNKPSDGRPK	3	WSFMNKPSDGRPK3	37856.3	32927.5	57447.1
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	WSFMNKPSDGRPK	WSFMNKPSDGRPK	4	WSFMNKPSDGRPK4	33539.4	22874.3	37358.8
Q63072	Q63072	BST1_RAT	Bst1	ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 2	1	WSGEGTTPHLQSIFLGR	WSGEGTTPHLQSIFLGR	3	WSGEGTTPHLQSIFLGR3	17923.8	5544.21	10338
Q3T1I4	Q3T1I4	PRRC1_RAT	Prrc1	Protein PRRC1	1	WSGLLVTVGEVLEK	WSGLLVTVGEVLEK	2	WSGLLVTVGEVLEK2	2744.25	3580.84	6550.4
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	WSGNEPTDEFSDLPLR	WSGNEPTDEFSDLPLR	2	WSGNEPTDEFSDLPLR2	11806.5	7432.69	15142
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	WSGNESTDDFSELSFR	WSGNESTDDFSELSFR	2	WSGNESTDDFSELSFR2	7317.22	3330.28	2734.6
Q499T5	Q499T5	Q499T5_RAT	Capn7	Calpain 7	1	WSGQSAGGCGNFQETHK	WSGQSAGGC(UniMod:4)GNFQETHK	3	WSGQSAGGC(UniMod:4)GNFQETHK3	3858.51	6203.19	
A0A8I6ATH0	A0A8I6ATH0	A0A8I6ATH0_RAT	Braf	non-specific serine/threonine protein kinase	1	WSGSHQFEQLSGSILWMAPEVIR	WSGSHQFEQLSGSILWMAPEVIR	3	WSGSHQFEQLSGSILWMAPEVIR3	18124.8	17857	21797.3
P20673	P20673	ARLY_RAT	Asl	Argininosuccinate lyase	1	WSHWILSHAVALTR	WSHWILSHAVALTR	3	WSHWILSHAVALTR3	8241.15		1639.5
P20673	P20673	ARLY_RAT	Asl	Argininosuccinate lyase	1	WSHWILSHAVALTR	WSHWILSHAVALTR	4	WSHWILSHAVALTR4	4458.93	4837.95	
D3ZSZ6	D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	1	WSIMTYELK	WSIMTYELK	2	WSIMTYELK2	71880.9	75583.3	72481.1
F1M7Z1	F1M7Z1	F1M7Z1_RAT	Edc3	Enhancer of mRNA-decapping protein 3	1	WSLALGLPLPLGEHAGR	WSLALGLPLPLGEHAGR	3	WSLALGLPLPLGEHAGR3	12352.5	7709.84	11956.7
P17955	P17955	NUP62_RAT	Nup62	Nuclear pore glycoprotein p62	1	WSLELEDQER	WSLELEDQER	2	WSLELEDQER2	9877.77	2925.98	6423.13
A0A8I6A072	A0A8I6A072	A0A8I6A072_RAT	Rabl3	RAB, member of RAS oncogene family-like 3	1	WSLEVLNR	WSLEVLNR	2	WSLEVLNR2	6253.1	5271.59	3056.96
A0A8I5ZRA1	A0A8I5ZRA1	A0A8I5ZRA1_RAT	Relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	1	WSLMEQIR	WSLMEQIR	2	WSLMEQIR2	45681	57981.8	42320.5
Q9JHU5	Q9JHU5	ARFP1_RAT	Arfip1	Arfaptin-1	1	WSLNTYK	WSLNTYK	2	WSLNTYK2	11704.8	15812.3	18433.2
Q641Z9	Q641Z9	Q641Z9_RAT	Sdhc	Succinate dehydrogenase cytochrome b560 subunit, mitochondrial	1	WSLPMAMSVCHR	WSLPMAMSVC(UniMod:4)HR	2	WSLPMAMSVC(UniMod:4)HR2	9738.53	9040.75	8753.74
Q641Z9	Q641Z9	Q641Z9_RAT	Sdhc	Succinate dehydrogenase cytochrome b560 subunit, mitochondrial	1	WSLPMAMSVCHR	WSLPMAMSVC(UniMod:4)HR	3	WSLPMAMSVC(UniMod:4)HR3	52432.4	37361.3	35751.4
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	WSNDGCHILPSHDEGAR	WSNDGC(UniMod:4)HILPSHDEGAR	2	WSNDGC(UniMod:4)HILPSHDEGAR2	4766.1	3707.49	6952.05
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	WSNDGCHILPSHDEGAR	WSNDGC(UniMod:4)HILPSHDEGAR	3	WSNDGC(UniMod:4)HILPSHDEGAR3	91056.2	91531.1	61539.1
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	WSNDGCHILPSHDEGAR	WSNDGC(UniMod:4)HILPSHDEGAR	4	WSNDGC(UniMod:4)HILPSHDEGAR4	75470.9	101061	92138.8
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	WSNFDPTGLER	WSNFDPTGLER	2	WSNFDPTGLER2	56001.5	43776.1	54421.1
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	WSNFPGLQQLFLK	WSNFPGLQQLFLK	2	WSNFPGLQQLFLK2	35397.7	25719.8	23052.5
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	WSNVKPVR	WSNVKPVR	2	WSNVKPVR2	59438.9	51242.3	43556.9
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	WSPAGIGMR	WSPAGIGMR	2	WSPAGIGMR2	313003	278539	362476
A0A8I5ZU57	A0A8I5ZU57	A0A8I5ZU57_RAT	Ccny	Cyclin Y	1	WSPAIIS	WSPAIIS	1	WSPAIIS1	15375.6	25935.6	24584
Q9EQX9	Q9EQX9	UBE2N_RAT	Ube2n	Ubiquitin-conjugating enzyme E2 N	1	WSPALQIR	WSPALQIR	2	WSPALQIR2	46605.7	36264.5	46459.6
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	WSPEHNAQPQVALSTEGPSNPDDNK	WSPEHNAQPQVALSTEGPSNPDDNK	3	WSPEHNAQPQVALSTEGPSNPDDNK3	2685.39	5075.84	3080.56
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	WSPEHNAQPQVALSTEGPSNPDDNKELK	WSPEHNAQPQVALSTEGPSNPDDNKELK	4	WSPEHNAQPQVALSTEGPSNPDDNKELK4	9053.11	4444.54	
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	WSPELPVCAR	WSPELPVC(UniMod:4)AR	2	WSPELPVC(UniMod:4)AR2	7.57912e+06	7.28805e+06	8.19494e+06
P26644	P26644	APOH_RAT	Apoh	Beta-2-glycoprotein 1	1	WSPELPVCAR	WSPELPVC(UniMod:4)AR	3	WSPELPVC(UniMod:4)AR3	14382.4	24833.6	34712.9
B1H282	B1H282	B1H282_RAT	Colgalt1	Collagen beta(1-O)galactosyltransferase 1	1	WSPESPLQAPR	WSPESPLQAPR	2	WSPESPLQAPR2	12583.7	8717.44	
Q5PPK9	Q5PPK9	EIPR1_RAT	Eipr1	EARP and GARP complex-interacting protein 1	1	WSPHHNCTQVATASDTTLR	WSPHHNC(UniMod:4)TQVATASDTTLR	3	WSPHHNC(UniMod:4)TQVATASDTTLR3	8476.29	7996.86	8756.26
Q5PPK9	Q5PPK9	EIPR1_RAT	Eipr1	EARP and GARP complex-interacting protein 1	1	WSPHHNCTQVATASDTTLR	WSPHHNC(UniMod:4)TQVATASDTTLR	4	WSPHHNC(UniMod:4)TQVATASDTTLR4	23516.2	19175.1	26340.6
Q99PD4	Q99PD4	ARC1A_RAT	Arpc1a	Actin-related protein 2/3 complex subunit 1A	1	WSPLENK	WSPLENK	2	WSPLENK2	143673	138537	153558
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	WSPPEVLMYSK	WSPPEVLMYSK	2	WSPPEVLMYSK2	155774	150569	158313
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	WSPPLPTCFR	WSPPLPTC(UniMod:4)FR	2	WSPPLPTC(UniMod:4)FR2	156268	177865	181715
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	WSPVASTLPELVQR	WSPVASTLPELVQR	2	WSPVASTLPELVQR2	272096	259585	285278
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	WSPVASTLPELVQR	WSPVASTLPELVQR	3	WSPVASTLPELVQR3	80032.1	95115.4	107267
B2RYD0	B2RYD0	B2RYD0_RAT	Ube2g2	Ubiquitin-conjugating enzyme E2G 2	1	WSPVQSVEK	WSPVQSVEK	2	WSPVQSVEK2	71901.9	65964.3	64447.9
A0A0G2JZ84	A0A0G2JZ84	A0A0G2JZ84_RAT	Epg5	Ectopic P-granules autophagy protein 5 homolog	1	WSPYMADVK	WSPYMADVK	2	WSPYMADVK2	4678.04	5865.95	16735.9
D3ZA88	D3ZA88	D3ZA88_RAT	Trim34	Tripartite motif-containing 34	1	WSQIWTLK	WSQIWTLK	2	WSQIWTLK2	4807.37	4962.37	4038.57
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	WSQPPTCLHACVIPEDIMEK	WSQPPTC(UniMod:4)LHAC(UniMod:4)VIPEDIMEK	3	WSQPPTC(UniMod:4)LHAC(UniMod:4)VIPEDIMEK3	315228	274575	282770
Q5FVN2	Q5FVN2	TM41B_RAT	Tmem41b	Transmembrane protein 41B	1	WSQQVER	WSQQVER	2	WSQQVER2	37644.8	31255.7	25628.8
Q9WV75	Q9WV75	SPON2_RAT	Spon2	Spondin-2	1	WSQTAFPK	WSQTAFPK	2	WSQTAFPK2		5437.39	
A0A8I5ZYA8	A0A8I5ZYA8	A0A8I5ZYA8_RAT	Emc1	ER membrane protein complex subunit 1	1	WSQVAPPVLK	WSQVAPPVLK	2	WSQVAPPVLK2	26301.4	42547.3	27590.8
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	WSRPQAPITGYR	WSRPQAPITGYR	2	WSRPQAPITGYR2	509983	457358	422474
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	WSRPQAPITGYR	WSRPQAPITGYR	3	WSRPQAPITGYR3	97605.2	129325	116317
F1LXF5	F1LXF5	F1LXF5_RAT	Get4	Guided entry of tail-anchored proteins factor 4	1	WSSGGSGK	WSSGGSGK	2	WSSGGSGK2			35296.4
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	WSSLACNIALDAVK	WSSLAC(UniMod:4)NIALDAVK	2	WSSLAC(UniMod:4)NIALDAVK2	56168.4	50499.2	55290.6
Q6P502	Q6P502	TCPG_RAT	Cct3	T-complex protein 1 subunit gamma	1	WSSLACNIALDAVK	WSSLAC(UniMod:4)NIALDAVK	3	WSSLAC(UniMod:4)NIALDAVK3	7431.32	6924.29	9493.47
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	WSSNDLMDK	WSSNDLMDK	2	WSSNDLMDK2	17094.6	15708.9	21385.7
D3ZUL5	D3ZUL5	D3ZUL5_RAT	Myct1	Myc target 1	1	WSSNSLR	WSSNSLR	2	WSSNSLR2	274896	189405	249565
D3Z8I4	D3Z8I4	D3Z8I4_RAT	Map4k1	Mitogen-activated protein kinase kinase kinase kinase 1	1	WSSSFHNFVK	WSSSFHNFVK	3	WSSSFHNFVK3	16827.3	10819.2	15876
P37136	P37136	ACES_RAT	Ache	Acetylcholinesterase	1	WSSYMVHWK	WSSYMVHWK	3	WSSYMVHWK3	4565.77		
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	WSTANPSAVAGR	WSTANPSAVAGR	2	WSTANPSAVAGR2	46933.8	56460.5	53254
A0A8I5ZZK5	A0A8I5ZZK5	A0A8I5ZZK5_RAT	Bank1	B-cell scaffold protein with ankyrin repeats 1	1	WSTDSSEEPVSVDTK	WSTDSSEEPVSVDTK	2	WSTDSSEEPVSVDTK2	1936.14	1373.24	4419.18
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	WSTLVEDYGVELR	WSTLVEDYGVELR	2	WSTLVEDYGVELR2	50822.2	57223.7	47647.2
Q5XIC6	Q5XIC6	Q5XIC6_RAT	Psmd12	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12	1	WSTLVEDYGVELRK	WSTLVEDYGVELRK	3	WSTLVEDYGVELRK3	32737	34439.7	25186.8
P48450	P48450	LSS_RAT	Lss	Lanosterol synthase	1	WSVDGPSSPAFQEHVSR	WSVDGPSSPAFQEHVSR	3	WSVDGPSSPAFQEHVSR3	4077.14	5038.61	3896.35
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	WSVLAGHSR	WSVLAGHSR	2	WSVLAGHSR2	394114	387998	384180
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	WSVLPRPELHHDVNR	WSVLPRPELHHDVNR	3	WSVLPRPELHHDVNR3	7650.12	5938.43	5708.9
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	WSVLPRPELHHDVNR	WSVLPRPELHHDVNR	4	WSVLPRPELHHDVNR4	26537.6	22194.9	42181.3
P11497	P11497	ACACA_RAT	Acaca	Acetyl-CoA carboxylase 1	1	WSYEMFR	WSYEMFR	2	WSYEMFR2	11107.7	2309.28	4969.27
Q6AXV4	Q6AXV4	SAM50_RAT	Samm50	Sorting and assembly machinery component 50 homolog	1	WSYGAGIVLR	WSYGAGIVLR	2	WSYGAGIVLR2	15690.5	13994.3	11359.5
D3ZDE4	D3ZDE4	D3ZDE4_RAT	Dguok	Deoxyguanosine kinase	1	WSYTFQTLSFMSR	WSYTFQTLSFMSR	2	WSYTFQTLSFMSR2	5185.88	6874.67	2912.72
A0A0G2JST1	A0A0G2JST1	A0A0G2JST1_RAT	Adgrg6	Adhesion G protein-coupled receptor G6	1	WTAISPSVYK	WTAISPSVYK	2	WTAISPSVYK2	13792.4	14154.2	8020.4
Q9WUD9	Q9WUD9;Q62844;F1LM93	SRC_RAT	Src	Proto-oncogene tyrosine-protein kinase Src	0	WTAPEAALYGR	WTAPEAALYGR	2	WTAPEAALYGR2	372289	328347	379355
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	WTAPEAINFGCFTIK	WTAPEAINFGC(UniMod:4)FTIK	2	WTAPEAINFGC(UniMod:4)FTIK2	96767.5	100628	99205.3
Q07014	Q07014	LYN_RAT	Lyn	Tyrosine-protein kinase Lyn	1	WTAPEAINFGCFTIK	WTAPEAINFGC(UniMod:4)FTIK	3	WTAPEAINFGC(UniMod:4)FTIK3	15221.5	15439.9	9112.61
Q62662	Q62662	FRK_RAT	Frk	Tyrosine-protein kinase FRK	1	WTAPEAIR	WTAPEAIR	2	WTAPEAIR2	64833.8	64925.5	48015.8
P41243	P41243	MATK_RAT	Matk	Megakaryocyte-associated tyrosine-protein kinase	1	WTAPEALK	WTAPEALK	2	WTAPEALK2	20827.1	25776.4	18249.4
P09760	P09760;D4A584	FER_RAT	Fer	Tyrosine-protein kinase Fer	0	WTAPEALNYGR	WTAPEALNYGR	2	WTAPEALNYGR2	18650.9	10400.2	15775.1
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	WTAPEALR	WTAPEALR	2	WTAPEALR2	64833.8	64925.5	48015.8
A0A8I5ZUS1	A0A8I5ZUS1	A0A8I5ZUS1_RAT	Map3k4	Mitogen activated protein kinase kinase kinase 4	1	WTASQLLDHAFVK	WTASQLLDHAFVK	3	WTASQLLDHAFVK3		2429.41	3450.21
Q63415	Q63415	PCSK6_RAT	Pcsk6	Proprotein convertase subtilisin/kexin type 6	1	WTAVPSQHMCVATADK	WTAVPSQHMC(UniMod:4)VATADK	3	WTAVPSQHMC(UniMod:4)VATADK3		3270.08	3063.62
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	WTCCALLAGSEYLK	WTC(UniMod:4)C(UniMod:4)ALLAGSEYLK	2	WTC(UniMod:4)C(UniMod:4)ALLAGSEYLK2	18168.2	24384.2	18089.5
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	WTCCALLAGSEYLK	WTC(UniMod:4)C(UniMod:4)ALLAGSEYLK	3	WTC(UniMod:4)C(UniMod:4)ALLAGSEYLK3			2435.87
D3ZDW3	D3ZDW3	D3ZDW3_RAT	Tsc22d2	TSC22 domain family, member 2	1	WTCMEYYER	WTC(UniMod:4)MEYYER	2	WTC(UniMod:4)MEYYER2	13956	17277.5	18486.2
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	WTCQWDLQYYECR	WTC(UniMod:4)QWDLQYYEC(UniMod:4)R	2	WTC(UniMod:4)QWDLQYYEC(UniMod:4)R2	4527.75	9019.54	2735.06
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	WTCQWDLQYYECR	WTC(UniMod:4)QWDLQYYEC(UniMod:4)R	3	WTC(UniMod:4)QWDLQYYEC(UniMod:4)R3		3020.25	6659.04
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	WTCTSSSSSPQYNICEQMIQIR	WTC(UniMod:4)TSSSSSPQYNIC(UniMod:4)EQMIQIR	3	WTC(UniMod:4)TSSSSSPQYNIC(UniMod:4)EQMIQIR3	71560.2	74012.6	62068.4
Q3B8N7	Q3B8N7	T22D4_RAT	Tsc22d4	TSC22 domain family protein 4	1	WTCVDVYER	WTC(UniMod:4)VDVYER	2	WTC(UniMod:4)VDVYER2	69992.1	68301.1	77343.8
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	WTDENIDMVALK	WTDENIDMVALK	2	WTDENIDMVALK2	96330.1	118602	116631
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	WTDLFDTK	WTDLFDTK	2	WTDLFDTK2	57072.7	29261.3	87628.9
Q8K4M9	Q8K4M9	OSBL1_RAT	Osbpl1a	Oxysterol-binding protein-related protein 1	1	WTECLYSVDPATFDAYKK	WTEC(UniMod:4)LYSVDPATFDAYKK	3	WTEC(UniMod:4)LYSVDPATFDAYKK3	13618	17019.4	13661.9
G3V8Y8	F1LML7;G3V8Y8	G3V8Y8_RAT	Hip1	Huntingtin interacting protein 1	0	WTEGLISASK	WTEGLISASK	2	WTEGLISASK2	5282.41	4219.59	5387.13
Q5M9G9	Q5M9G9	FAKD4_RAT	Tbrg4	FAST kinase domain-containing protein 4	1	WTEISDSR	WTEISDSR	2	WTEISDSR2	8520.02	12258.3	9937.02
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	WTELANLINTCMDYEPDFRPAFR	WTELANLINTC(UniMod:4)MDYEPDFRPAFR	3	WTELANLINTC(UniMod:4)MDYEPDFRPAFR3	48791.7	49629.9	60011.1
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	WTELDTNQHR	WTELDTNQHR	2	WTELDTNQHR2	3225.9	4592.55	4009.33
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	WTELDTNQHR	WTELDTNQHR	3	WTELDTNQHR3	27336.4	25129.8	28236.4
P29315	P29315	RINI_RAT	Rnh1	Ribonuclease inhibitor	1	WTELLPLIQQYQVVR	WTELLPLIQQYQVVR	2	WTELLPLIQQYQVVR2	47773	46251	61970.7
P29315	P29315	RINI_RAT	Rnh1	Ribonuclease inhibitor	1	WTELLPLIQQYQVVR	WTELLPLIQQYQVVR	3	WTELLPLIQQYQVVR3	15308.8	10378.6	16209.4
Q63635	Q63635	STX6_RAT	Stx6	Syntaxin-6	1	WTELLQGPSAATR	WTELLQGPSAATR	2	WTELLQGPSAATR2	28419.2	17641.8	30080.6
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	WTELLSK	WTELLSK	2	WTELLSK2	41742.1	49482.2	42888.6
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	WTELPQCVATDQLEK	WTELPQC(UniMod:4)VATDQLEK	2	WTELPQC(UniMod:4)VATDQLEK2	56019.1	50447	42169.8
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	WTELPQCVATDQLEK	WTELPQC(UniMod:4)VATDQLEK	3	WTELPQC(UniMod:4)VATDQLEK3	16534.5	16500.6	14161.2
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	WTETYVR	WTETYVR	2	WTETYVR2	112858	144321	117827
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	WTEVLLNIASQK	WTEVLLNIASQK	2	WTEVLLNIASQK2	2851.93	1783.02	3919.38
Q9Z2L0	Q9Z2L0	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	1	WTEYGLTFTEK	WTEYGLTFTEK	2	WTEYGLTFTEK2	275725	263427	261824
Q4V8B0	Q4V8B0	OXR1_RAT	Oxr1	Oxidation resistance protein 1	1	WTGDNMFFIK	WTGDNMFFIK	2	WTGDNMFFIK2	37791.8	44587.9	37665.6
Q5RJS8	Q5RJS8	TPST2_RAT	Tpst2	Protein-tyrosine sulfotransferase 2	1	WTGHIPR	WTGHIPR	2	WTGHIPR2	11157.1		
Q7M767	A0A8I6A3Q1;A0A8I6AT35;Q66H93;A0A8I6GI22;Q7M767;A0A8I6A6C8	UB2V2_RAT	Ube2v2	Ubiquitin-conjugating enzyme E2 variant 2	0	WTGMIIGPPR	WTGMIIGPPR	2	WTGMIIGPPR2	42669.3	31264.1	35528.5
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	WTIQYNK	WTIQYNK	2	WTIQYNK2	31189.6	29652.9	33897.4
Q5M7W6	Q5M7W6	F234A_RAT	Fam234a	Protein FAM234A	1	WTLGATQVLR	WTLGATQVLR	2	WTLGATQVLR2	10235.4	8458.76	3977.04
P85971	P85971	6PGL_RAT	Pgls	6-phosphogluconolactonase	1	WTLGFCDER	WTLGFC(UniMod:4)DER	2	WTLGFC(UniMod:4)DER2	15726.7	12932.8	10608.7
A0A8I6G2U9	A0A8I6G2U9	A0A8I6G2U9_RAT	Sh3pxd2a	SH3 and PX domains 2A	1	WTLGGMVNR	WTLGGMVNR	2	WTLGGMVNR2		1799.26	
Q6AY17	Q6AY17	AB17B_RAT	Abhd17b	Alpha/beta hydrolase domain-containing protein 17B	1	WTLHLSER	WTLHLSER	2	WTLHLSER2	4083.96	5099.69	2505.56
Q6P6Q2	Q6P6Q2	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	1	WTLLQEQGTK	WTLLQEQGTK	2	WTLLQEQGTK2	343178	266924	270030
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	WTLTAEDGPAR	WTLTAEDGPAR	2	WTLTAEDGPAR2	438242	448750	478101
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	WTLVNDETQAK	WTLVNDETQAK	2	WTLVNDETQAK2	13854.3	19607.9	13385.3
Q5FVN0	Q5FVN0	MBOA5_RAT	Lpcat3	Lysophospholipid acyltransferase 5	1	WTMPHCVLTLK	WTMPHC(UniMod:4)VLTLK	3	WTMPHC(UniMod:4)VLTLK3	22727.6	19341	16283.4
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	WTNIPLLVK	WTNIPLLVK	2	WTNIPLLVK2	25479.6	46935.9	31278.9
Q6MG55	Q6MG55	ABHGA_RAT	Abhd16a	Phosphatidylserine lipase ABHD16A	1	WTNPQYR	WTNPQYR	2	WTNPQYR2	96973.7	117231	126327
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	WTNQLNSLNQAVVSK	WTNQLNSLNQAVVSK	2	WTNQLNSLNQAVVSK2	76290.9	104270	96107.3
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	WTNQLNSLNQAVVSK	WTNQLNSLNQAVVSK	3	WTNQLNSLNQAVVSK3	20978.8	26729.9	18818.2
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	WTNYIHGWQDR	WTNYIHGWQDR	3	WTNYIHGWQDR3	35078	44133	27041.6
D4A8B0	D4A8B0	D4A8B0_RAT	Sec14l5	SEC14-like lipid binding 5	1	WTPAPVR	WTPAPVR	2	WTPAPVR2	39771.3	24644.4	32175.9
Q63356	D4A7X9;Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	0	WTPIEYFNNK	WTPIEYFNNK	2	WTPIEYFNNK2	44447.5	74094.4	53581.4
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	WTPIPPQCK	WTPIPPQC(UniMod:4)K	2	WTPIPPQC(UniMod:4)K2	31808.2	32522.4	32435.7
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	WTPVSMADLVTPEQVK	WTPVSMADLVTPEQVK	2	WTPVSMADLVTPEQVK2	9422.04	15848.5	12613
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	WTPVSMADLVTPEQVK	WTPVSMADLVTPEQVK	3	WTPVSMADLVTPEQVK3	7184.48	5562.06	1500.02
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	WTQLLANSATR	WTQLLANSATR	2	WTQLLANSATR2	286620	293479	287571
Q63525	Q63525	NUDC_RAT	Nudc	Nuclear migration protein nudC	1	WTQTLSELDLAVPFR	WTQTLSELDLAVPFR	2	WTQTLSELDLAVPFR2	6567.6	13909.6	11799.9
Q63525	Q63525	NUDC_RAT	Nudc	Nuclear migration protein nudC	1	WTQTLSELDLAVPFR	WTQTLSELDLAVPFR	3	WTQTLSELDLAVPFR3	13967.9	6172.56	11187.3
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	WTSLELVK	WTSLELVK	2	WTSLELVK2	18549.9	15503	14779.3
A0A0G2JZE7	A0A0G2JZE7	A0A0G2JZE7_RAT	Arhgef40	Rho guanine nucleotide exchange factor 40	1	WTSSIAQLLWR	WTSSIAQLLWR	2	WTSSIAQLLWR2	8057.77	8826.09	13863.2
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	WTTAPKPTMADELYDQDYPIHSVEDR	WTTAPKPTMADELYDQDYPIHSVEDR	4	WTTAPKPTMADELYDQDYPIHSVEDR4	141724	128060	157642
D3ZSZ6	F1M5T2;D3ZSZ6	D3ZSZ6_RAT	Dgkh	Diacylglycerol kinase	0	WTTLASIGK	WTTLASIGK	2	WTTLASIGK2	220836	243519	196906
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	WTTLPICVEYER	WTTLPIC(UniMod:4)VEYER	2	WTTLPIC(UniMod:4)VEYER2	558554	499649	472828
G3V9R2	G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	1	WTTLPICVEYER	WTTLPIC(UniMod:4)VEYER	3	WTTLPIC(UniMod:4)VEYER3	4577.85	2027.71	3116.8
A0A0G2K975	A0A0G2K975	A0A0G2K975_RAT	Cfhr4	Similar to complement factor H-related protein	1	WTTLPTCVEEK	WTTLPTC(UniMod:4)VEEK	2	WTTLPTC(UniMod:4)VEEK2	17641.3	10070.3	10146.7
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	WTTSQLLQHPFVTVDSNKPVR	WTTSQLLQHPFVTVDSNKPVR	3	WTTSQLLQHPFVTVDSNKPVR3	15237.1	13258.8	6857.33
O08815	O08815	SLK_RAT	Slk	STE20-like serine/threonine-protein kinase	1	WTTSQLLQHPFVTVDSNKPVR	WTTSQLLQHPFVTVDSNKPVR	4	WTTSQLLQHPFVTVDSNKPVR4	60960.5	75626.3	67699.3
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	WTTVPQQHVCVESTDR	WTTVPQQHVC(UniMod:4)VESTDR	2	WTTVPQQHVC(UniMod:4)VESTDR2	21850.6	12546.2	12478.8
P41413	P41413	PCSK5_RAT	Pcsk5	Proprotein convertase subtilisin/kexin type 5	1	WTTVPQQHVCVESTDR	WTTVPQQHVC(UniMod:4)VESTDR	3	WTTVPQQHVC(UniMod:4)VESTDR3	31769.5	29654.9	30479.1
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	WTWAVEWLGDELER	WTWAVEWLGDELER	2	WTWAVEWLGDELER2	2379.13	10989	5356.26
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	WTWAVEWLGDELER	WTWAVEWLGDELER	3	WTWAVEWLGDELER3	7332.98		11588.7
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	WTWSAVR	WTWSAVR	2	WTWSAVR2	15855.2	10950.5	
P14630	P14630	APOM_RAT	Apom	Apolipoprotein M	1	WTYHLTEGK	WTYHLTEGK	2	WTYHLTEGK2	1.11771e+06	1.16936e+06	1.10767e+06
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	WVASSIAEK	WVASSIAEK	2	WVASSIAEK2	47357.2	51933.1	56569.4
P08290	P08290	ASGR2_RAT	Asgr2	Asialoglycoprotein receptor 2	1	WVDGTEYR	WVDGTEYR	2	WVDGTEYR2	303802	356100	314999
P10716	P10716	CLC4F_RAT	Clec4f	C-type lectin domain family 4 member F	1	WVDGTPFDYVQSR	WVDGTPFDYVQSR	2	WVDGTPFDYVQSR2	20366.8	22125.2	22738.5
A0A0G2K528	A0A0G2K528	A0A0G2K528_RAT	Stx16	Syntaxin 16	1	WVDGVDEIQYDVGR	WVDGVDEIQYDVGR	2	WVDGVDEIQYDVGR2	18713.2	17503.6	17753.4
P16446	P16446	PIPNA_RAT	Pitpna	Phosphatidylinositol transfer protein alpha isoform	1	WVDLTMDDIR	WVDLTMDDIR	2	WVDLTMDDIR2	8508.26	4358.22	
P16446	P16446	PIPNA_RAT	Pitpna	Phosphatidylinositol transfer protein alpha isoform	1	WVDLTMDDIRR	WVDLTMDDIRR	3	WVDLTMDDIRR3	43204.8	29710.7	48187.2
P09812	P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	1	WVDTQVVLAMPYDTPVPGYR	WVDTQVVLAMPYDTPVPGYR	3	WVDTQVVLAMPYDTPVPGYR3	6897.57	13169.7	7493.37
A0A8I6GIL4	A0A8I6GIL4	A0A8I6GIL4_RAT	Tmem87a	Transmembrane protein 87A	1	WVEENVPSSVTDVALPALLDSDEER	WVEENVPSSVTDVALPALLDSDEER	3	WVEENVPSSVTDVALPALLDSDEER3	4439.96	26565	
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	WVELPITK	WVELPITK	2	WVELPITK2	42720.6	43852.1	47490.2
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	WVELTDK	WVELTDK	2	WVELTDK2	65831.9	48582.6	57581.4
D3ZWR1	D3ZWR1	D3ZWR1_RAT	Nt5c	5', 3'-nucleotidase, cytosolic	1	WVEQNLGPQFVER	WVEQNLGPQFVER	2	WVEQNLGPQFVER2	6390.44	6519.25	3112.14
Q641Y0	Q641Y0	OST48_RAT	Ddost	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit	1	WVFKEEGVLR	WVFKEEGVLR	2	WVFKEEGVLR2	21976.8	11872.2	23715.5
Q641Y0	Q641Y0	OST48_RAT	Ddost	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit	1	WVFKEEGVLR	WVFKEEGVLR	3	WVFKEEGVLR3	83440.7	91180.6	95524.7
P51792	P51792	CLCN3_RAT	Clcn3	H(+)/Cl(-) exchange transporter 3	1	WVGDAFGR	WVGDAFGR	2	WVGDAFGR2	44847.8	34430.6	30717.8
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	WVGGPEIELIAIATGGR	WVGGPEIELIAIATGGR	2	WVGGPEIELIAIATGGR2	89590	77289.4	101603
Q68FQ0	Q68FQ0	TCPE_RAT	Cct5	T-complex protein 1 subunit epsilon	1	WVGGPEIELIAIATGGR	WVGGPEIELIAIATGGR	3	WVGGPEIELIAIATGGR3	13101.5	9224.85	14258
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	WVGILEGLQAILHK	WVGILEGLQAILHK	2	WVGILEGLQAILHK2	3262.17	4757	1880.26
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	WVGILEGLQAILHK	WVGILEGLQAILHK	3	WVGILEGLQAILHK3	22909.4	24037.2	25980.6
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	WVGVILDEAK	WVGVILDEAK	2	WVGVILDEAK2	208075	207712	212875
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	WVGVLSELHK	WVGVLSELHK	2	WVGVLSELHK2	8791.67		8943.48
O54874	O54874	MRCKA_RAT	Cdc42bpa	Serine/threonine-protein kinase MRCK alpha	1	WVGVLSELHK	WVGVLSELHK	3	WVGVLSELHK3	32472.4	21389.2	23993.2
F7FGS9	F7FGS9	F7FGS9_RAT	Marchf5	Membrane associated ring-CH-type finger 5	1	WVHQACLQR	WVHQAC(UniMod:4)LQR	3	WVHQAC(UniMod:4)LQR3	9069.68	8587.39	
A0A8I5ZQG6	A0A8I5ZQG6	A0A8I5ZQG6_RAT	Sez6l2	Seizure related 6 homolog like 2	1	WVIEAAEGR	WVIEAAEGR	2	WVIEAAEGR2	37043.5	29963.3	35634.9
P11915	P11915	SCP2_RAT	Scp2	Sterol carrier protein 2	1	WVINPSGGLISK	WVINPSGGLISK	2	WVINPSGGLISK2	11217.6		7911.6
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	WVIPALK	WVIPALK	2	WVIPALK2	84910.4	77949.8	76728.3
D3ZXD8	D3ZXD8	TM245_RAT	Tmem245	Transmembrane protein 245	1	WVISLTPLSQPGPSSNIIGQSVEEAIR	WVISLTPLSQPGPSSNIIGQSVEEAIR	3	WVISLTPLSQPGPSSNIIGQSVEEAIR3	3362.13	6839.59	
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	WVIYNDQK	WVIYNDQK	2	WVIYNDQK2	452218	419995	472630
F1LXA0	F1LXA0	F1LXA0_RAT	Ndufa12	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	1	WVIYTTEMNGK	WVIYTTEMNGK	2	WVIYTTEMNGK2	24696.8	18184.8	18704
P18614	P18614	ITA1_RAT	Itga1	Integrin alpha-1	1	WVLIGSPLVGQPK	WVLIGSPLVGQPK	2	WVLIGSPLVGQPK2	21532.4	28641.6	18697.2
P08661	P08661;Q7TMC0	MBL2_RAT	Mbl2	Mannose-binding protein C	0	WVLLSMSENVGK	WVLLSMSENVGK	2	WVLLSMSENVGK2	63719.9	57833.9	37556.6
P08661	P08661;Q7TMC0	MBL2_RAT	Mbl2	Mannose-binding protein C	0	WVLLSMSENVGKK	WVLLSMSENVGKK	3	WVLLSMSENVGKK3	26420.9	11726.2	22711.3
P09760	P09760	FER_RAT	Fer	Tyrosine-protein kinase Fer	1	WVLNHEDVSLGELLGK	WVLNHEDVSLGELLGK	3	WVLNHEDVSLGELLGK3	17855.5	9439.38	8372.49
P18292	P18292	THRB_RAT	F2	Prothrombin	1	WVLTAAHCILYPPWDK	WVLTAAHC(UniMod:4)ILYPPWDK	3	WVLTAAHC(UniMod:4)ILYPPWDK3	7.02591e+06	6.95457e+06	7.39764e+06
P18292	P18292	THRB_RAT	F2	Prothrombin	1	WVLTAAHCILYPPWDK	WVLTAAHC(UniMod:4)ILYPPWDK	4	WVLTAAHC(UniMod:4)ILYPPWDK4	12018.2	10013	9915.08
Q8CGU6	Q8CGU6	NICA_RAT	Ncstn	Nicastrin	1	WVLTDGPNPPYMVLLEGK	WVLTDGPNPPYMVLLEGK	3	WVLTDGPNPPYMVLLEGK3	21555.9	22302.7	16632.4
Q4AEF8	Q4AEF8	COPG1_RAT	Copg1	Coatomer subunit gamma-1	1	WVNEAQEAASSDNIMVQYHALGLLYHVR	WVNEAQEAASSDNIMVQYHALGLLYHVR	4	WVNEAQEAASSDNIMVQYHALGLLYHVR4	7981.21	16916.3	5896.52
P85107	P85107	TGS1_RAT	Tgs1	Trimethylguanosine synthase	1	WVNEPVDEEISQEPLSHNK	WVNEPVDEEISQEPLSHNK	3	WVNEPVDEEISQEPLSHNK3		5133.78	
P05370	P05370	G6PD_RAT	G6pdx	Glucose-6-phosphate 1-dehydrogenase	1	WVNPHKL	WVNPHKL	2	WVNPHKL2	8460.05	11592.4	13379.1
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	WVNQTLK	WVNQTLK	2	WVNQTLK2	140314	114097	136395
G3V6S0	A0A0G2K677;Q9QWN8;G3V6S0;A0A8I6AWM3	G3V6S0_RAT	Sptbn1	Spectrin beta chain	0	WVNSHLAR	WVNSHLAR	2	WVNSHLAR2	160530	152760	115342
Q68EJ0	Q68EJ0	NB5R4_RAT	Cyb5r4	Cytochrome b5 reductase 4	1	WVNYESMLK	WVNYESMLK	2	WVNYESMLK2	6288.12	3015.59	8790.17
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	WVNYHLTNAGWR	WVNYHLTNAGWR	3	WVNYHLTNAGWR3	2276.11	2757.09	2826.65
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	WVNYSAHYSYK	WVNYSAHYSYK	2	WVNYSAHYSYK2	2323.76	5212.1	4255.28
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	WVNYSAHYSYK	WVNYSAHYSYK	3	WVNYSAHYSYK3	8597.6	16819.5	19505
D3ZW40	D3ZW40	D3ZW40_RAT	Mtmr4	protein-tyrosine-phosphatase	1	WVPDHMASHCYNCDCEFWLAK	WVPDHMASHC(UniMod:4)YNC(UniMod:4)DC(UniMod:4)EFWLAK	4	WVPDHMASHC(UniMod:4)YNC(UniMod:4)DC(UniMod:4)EFWLAK4	7627.21		
Q8CFN2	Q8CFN2	CDC42_RAT	Cdc42	Cell division control protein 42 homolog	1	WVPEITHHCPK	WVPEITHHC(UniMod:4)PK	2	WVPEITHHC(UniMod:4)PK2	81861.1	61736.4	53203.6
Q8CFN2	Q8CFN2	CDC42_RAT	Cdc42	Cell division control protein 42 homolog	1	WVPEITHHCPK	WVPEITHHC(UniMod:4)PK	3	WVPEITHHC(UniMod:4)PK3	694687	551269	502784
Q32Q06	Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	1	WVPENSEIVWSIK	WVPENSEIVWSIK	2	WVPENSEIVWSIK2	136423	155596	160769
Q641Y0	Q641Y0	OST48_RAT	Ddost	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit	1	WVPFDGDDIQLEFVR	WVPFDGDDIQLEFVR	2	WVPFDGDDIQLEFVR2	44099	35199.2	31325.2
Q641Y0	Q641Y0	OST48_RAT	Ddost	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit	1	WVPFDGDDIQLEFVR	WVPFDGDDIQLEFVR	3	WVPFDGDDIQLEFVR3	11899.4	6244.11	9394.69
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	WVPLQIDMKPEVPR	WVPLQIDMKPEVPR	3	WVPLQIDMKPEVPR3	29542.9	33869	29055.7
D3ZE15	D3ZE15;F1LZC5	D3ZE15_RAT	Ndufa13	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13	0	WVPPLIGELYGLR	WVPPLIGELYGLR	2	WVPPLIGELYGLR2	81869.6	72686.4	86620.7
D3ZE15	D3ZE15;F1LZC5	D3ZE15_RAT	Ndufa13	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13	0	WVPPLIGELYGLR	WVPPLIGELYGLR	3	WVPPLIGELYGLR3	13037.4	14521.1	15289.9
O55145	O55145	X3CL1_RAT	Cx3cl1	Fractalkine	1	WVQDAMK	WVQDAMK	2	WVQDAMK2	15847.5	12247.9	
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	WVQGEGILR	WVQGEGILR	2	WVQGEGILR2	1.06092e+06	1.12149e+06	1.11299e+06
A0A0G2KAU4	A0A0G2KAU4	A0A0G2KAU4_RAT	Rasgrp3	RAS guanyl releasing protein 3	1	WVQLMVLSK	WVQLMVLSK	2	WVQLMVLSK2		5244.86	2591.66
Q8K3R0	Q8K3R0	EST2A_RAT	Ces2a	Pyrethroid hydrolase Ces2a	1	WVQQNIAYFGGNHGK	WVQQNIAYFGGNHGK	3	WVQQNIAYFGGNHGK3	8357.91	2876.58	2130.84
D3ZQ18	D3ZQ18	D3ZQ18_RAT	Nccrp1	NCCRP1, F-box associated domain containing	1	WVQVSHVFR	WVQVSHVFR	3	WVQVSHVFR3	4113.9	4879.07	5637.6
B2GUY0	B2GUY0	MA1B1_RAT	Man1b1	Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase	1	WVSENLDFQK	WVSENLDFQK	2	WVSENLDFQK2	16482.8	15421.8	17614.4
D3ZET9	D3ZET9	D3ZET9_RAT	Cep170	Centrosomal protein 170	1	WVSQWASLAANHTR	WVSQWASLAANHTR	3	WVSQWASLAANHTR3	25205.7	18858.8	15523.9
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	WVSSPLK	WVSSPLK	2	WVSSPLK2	35184.2	33222.6	41154.3
D3ZEF9	D3ZEF9	D3ZEF9_RAT	B3gnt2	Hexosyltransferase	1	WVSTSCPDAEFVFK	WVSTSC(UniMod:4)PDAEFVFK	2	WVSTSC(UniMod:4)PDAEFVFK2	14564.9	10587	11234.8
D4A9D8	D4A9D8	D4A9D8_RAT	Osbp	Oxysterol-binding protein	1	WVTALELAK	WVTALELAK	2	WVTALELAK2	143267	171279	176095
D3ZN06	D3ZN06	D3ZN06_RAT	Cd248	CD248 molecule	1	WVTHAGNK	WVTHAGNK	2	WVTHAGNK2	24268.2	26277.7	21558.4
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	WVTLPLPR	WVTLPLPR	2	WVTLPLPR2	51695.6	56168.6	50662.5
P11240	P11240	COX5A_RAT	Cox5a	Cytochrome c oxidase subunit 5A, mitochondrial	1	WVTYFNKPDIDAWELR	WVTYFNKPDIDAWELR	3	WVTYFNKPDIDAWELR3	148518	180913	142750
P11240	P11240	COX5A_RAT	Cox5a	Cytochrome c oxidase subunit 5A, mitochondrial	1	WVTYFNKPDIDAWELRK	WVTYFNKPDIDAWELRK	3	WVTYFNKPDIDAWELRK3	101455	134363	97325.8
P11240	P11240	COX5A_RAT	Cox5a	Cytochrome c oxidase subunit 5A, mitochondrial	1	WVTYFNKPDIDAWELRK	WVTYFNKPDIDAWELRK	4	WVTYFNKPDIDAWELRK4	205817	254037	263520
D4A0T9	D4A0T9	D4A0T9_RAT	Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	1	WVTYSCQDQAQNK	WVTYSC(UniMod:4)QDQAQNK	2	WVTYSC(UniMod:4)QDQAQNK2	2179.12	1695.38	4081.48
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	WVVIGDENYGEGSSR	WVVIGDENYGEGSSR	2	WVVIGDENYGEGSSR2	61666.1	59828.6	68915.5
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	WVVPFSPVIQK	WVVPFSPVIQK	2	WVVPFSPVIQK2	41355.7	41702.2	58078.9
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	WVVPVLPK	WVVPVLPK	2	WVVPVLPK2	148439	194918	183561
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	WVVTDSK	WVVTDSK	2	WVVTDSK2	7911.9	24306.6	38964.3
A0A8I6AIV4	A0A8I5YB95;A0A8I6AIV4	A0A8I6AIV4_RAT	Dctn3l1	Dynactin 3-like 1	0	WVYGPGGTR	WVYGPGGTR	2	WVYGPGGTR2	228505	231328	240238
Q64350	Q64350	EI2BE_RAT	Eif2b5	Translation initiation factor eIF-2B subunit epsilon	1	WVYPLTPEVNFTDSSTQSYTHSR	WVYPLTPEVNFTDSSTQSYTHSR	3	WVYPLTPEVNFTDSSTQSYTHSR3	13820.1	18478.5	18207.6
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	WWDIIDNPK	WWDIIDNPK	2	WWDIIDNPK2	25580	40548.8	35333.1
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	WWDIIDNPKK	WWDIIDNPKK	3	WWDIIDNPKK3	1553.53	1643.19	7595.84
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	WWDNISAQK	WWDNISAQK	2	WWDNISAQK2	17376.8	15446.8	14508.4
O35760	O35760	IDI1_RAT	Idi1	Isopentenyl-diphosphate Delta-isomerase 1	1	WWDNLNHLSPFVDHEK	WWDNLNHLSPFVDHEK	4	WWDNLNHLSPFVDHEK4	1904.16	828.296	2051.17
P16446	P16446	PIPNA_RAT	Pitpna	Phosphatidylinositol transfer protein alpha isoform	1	WWGLQNK	WWGLQNK	2	WWGLQNK2	27074.8	11234.5	20924.5
Q11205	Q11205	SIA4B_RAT	St3gal2	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2	1	WWMMLQPQFK	WWMMLQPQFK	2	WWMMLQPQFK2	3105.22	3599.21	5938.29
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	WWQLPYYWVGIK	WWQLPYYWVGIK	2	WWQLPYYWVGIK2	23468.9	13703	11631.7
P58751	P58751	RELN_RAT	Reln	Reelin	1	WWQPFVISNGLVVSGVER	WWQPFVISNGLVVSGVER	3	WWQPFVISNGLVVSGVER3	2713.16	1677.8	
P58751	P58751	RELN_RAT	Reln	Reelin	1	WWQPQHGK	WWQPQHGK	2	WWQPQHGK2	40545.4	51594.4	50846.5
B3DMA2	B3DMA2	ACD11_RAT	Acad11	Acyl-CoA dehydrogenase family member 11	1	WWSSGAGNPK	WWSSGAGNPK	2	WWSSGAGNPK2	17635.8	21397.7	22341.8
B2GV73	B2GV73	B2GV73_RAT	Arpc3	Actin-related protein 2/3 complex subunit 3	1	WWTCFVK	WWTC(UniMod:4)FVK	2	WWTC(UniMod:4)FVK2	472673	484555	462920
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	WYAHQLQPIHYR	WYAHQLQPIHYR	3	WYAHQLQPIHYR3	11601.1	8514.92	7839.29
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	WYAHQLQPIHYR	WYAHQLQPIHYR	4	WYAHQLQPIHYR4	15367.5	9881.59	15812.8
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	WYAPECINYFK	WYAPEC(UniMod:4)INYFK	2	WYAPEC(UniMod:4)INYFK2	69061.1	51383.9	64181.1
P16257	P16257	TSPO_RAT	Tspo	Translocator protein	1	WYASLQK	WYASLQK	2	WYASLQK2	26359.1	27288.4	31154.5
P16257	P16257	TSPO_RAT	Tspo	Translocator protein	1	WYASLQKPSWHPPR	WYASLQKPSWHPPR	3	WYASLQKPSWHPPR3	38360.3	37500.2	32668.7
P16257	P16257	TSPO_RAT	Tspo	Translocator protein	1	WYASLQKPSWHPPR	WYASLQKPSWHPPR	4	WYASLQKPSWHPPR4	78718	3263.65	139672
A0A8I6A5X2	A0A8I6A5X2	A0A8I6A5X2_RAT	Usp32	ubiquitinyl hydrolase 1	1	WYCYNDSSCK	WYC(UniMod:4)YNDSSC(UniMod:4)K	2	WYC(UniMod:4)YNDSSC(UniMod:4)K2	3046.14	4195.85	
P13596	P13596	NCAM1_RAT	Ncam1	Neural cell adhesion molecule 1	1	WYDAKEANMEGIVTIMGLKPETR	WYDAKEANMEGIVTIMGLKPETR	4	WYDAKEANMEGIVTIMGLKPETR4	13895.3	21019.6	30682.1
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	WYEEALSISPTHVK	WYEEALSISPTHVK	2	WYEEALSISPTHVK2	2910.66		2461.01
A0A0G2JXJ6	A0A0G2JXJ6	A0A0G2JXJ6_RAT	Ttc7b	Tetratricopeptide repeat domain 7B	1	WYEEALSISPTHVK	WYEEALSISPTHVK	3	WYEEALSISPTHVK3	25550.2	21818.8	27215.8
P0C5W1	P0C5W1	MAP1S_RAT	Map1s	Microtubule-associated protein 1S	1	WYEETHEQHQALGIR	WYEETHEQHQALGIR	4	WYEETHEQHQALGIR4	9475.63	12248.1	14300.4
P23593	P23593	APOD_RAT	Apod	Apolipoprotein D	1	WYEIEKIPVSFEK	WYEIEKIPVSFEK	3	WYEIEKIPVSFEK3	25274	41939.9	40895.9
P15943	P15943	APLP2_RAT	Aplp2	Amyloid beta precursor like protein 2	1	WYFDLSK	WYFDLSK	2	WYFDLSK2	51115.9	53578.4	57399.9
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	WYFDVTEGK	WYFDVTEGK	2	WYFDVTEGK2	106368	92093.8	59561.2
O89035	O89035	DIC_RAT	Slc25a10	Mitochondrial dicarboxylate carrier	1	WYFGGLASCGAACCTHPLDLLK	WYFGGLASC(UniMod:4)GAAC(UniMod:4)C(UniMod:4)THPLDLLK	3	WYFGGLASC(UniMod:4)GAAC(UniMod:4)C(UniMod:4)THPLDLLK3	12068.6	12263.1	7187.68
O35532	O35532	MSMO1_RAT	Msmo1	Methylsterol monooxygenase 1	1	WYFTLAR	WYFTLAR	2	WYFTLAR2	8582.33	13334.2	20833.6
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	WYGFLEAQQAFR	WYGFLEAQQAFR	2	WYGFLEAQQAFR2	13183.6	13271.4	17821.3
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	WYHGHMSGGQAESLLQAK	WYHGHMSGGQAESLLQAK	3	WYHGHMSGGQAESLLQAK3	8026.31	6248.84	8256.33
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	WYHGHMSGGQAESLLQAK	WYHGHMSGGQAESLLQAK	4	WYHGHMSGGQAESLLQAK4	35272.3	26848.7	28798.7
B5DFI3	B5DFI3	B5DFI3_RAT	Ap1s1	AP complex subunit sigma	1	WYLATSDK	WYLATSDK	2	WYLATSDK2			9713.22
B5DFI3	B5DFI3	B5DFI3_RAT	Ap1s1	AP complex subunit sigma	1	WYLATSDKER	WYLATSDKER	2	WYLATSDKER2	14191.3		12634.4
B5DFI3	B5DFI3	B5DFI3_RAT	Ap1s1	AP complex subunit sigma	1	WYLATSDKER	WYLATSDKER	3	WYLATSDKER3	38295.8	26929.8	61016.1
O88422	O88422	GALT5_RAT	Galnt5	Polypeptide N-acetylgalactosaminyltransferase 5	1	WYLDNVFPDLK	WYLDNVFPDLK	2	WYLDNVFPDLK2		5192.85	11282.4
O88422	O88422	GALT5_RAT	Galnt5	Polypeptide N-acetylgalactosaminyltransferase 5	1	WYLDNVFPDLKAPVVR	WYLDNVFPDLKAPVVR	3	WYLDNVFPDLKAPVVR3		3245.6	
A0A8I6AU26	A0A8I6AU26	A0A8I6AU26_RAT	Galnt2	Polypeptide N-acetylgalactosaminyltransferase	1	WYLDNVYPELR	WYLDNVYPELR	2	WYLDNVYPELR2	105117	104889	105073
P49620	P49620	DGKG_RAT	Dgkg	Diacylglycerol kinase gamma	1	WYLEVMPR	WYLEVMPR	2	WYLEVMPR2	25815.6	27070.7	38498.5
F1LRE5	F1LRE5	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	1	WYLSAFHAGR	WYLSAFHAGR	3	WYLSAFHAGR3	13754.5	19922.7	11645.1
A0A0G2JXN8	A0A0G2JXN8;A0A8I5ZU98	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	0	WYLSGFYK	WYLSGFYK	2	WYLSGFYK2	11362.3	19991.3	16146.4
A0A0G2KAU4	A0A0G2KAU4	A0A0G2KAU4_RAT	Rasgrp3	RAS guanyl releasing protein 3	1	WYLSSTELAGK	WYLSSTELAGK	2	WYLSSTELAGK2	6812.22	4467.99	6907.32
P62744	P62744	AP2S1_RAT	Ap2s1	AP-2 complex subunit sigma	1	WYMQFDDDEKQK	WYMQFDDDEKQK	2	WYMQFDDDEKQK2		1210.76	3114.72
P62744	P62744	AP2S1_RAT	Ap2s1	AP-2 complex subunit sigma	1	WYMQFDDDEKQK	WYMQFDDDEKQK	3	WYMQFDDDEKQK3	16200	17085.5	13625.1
D3ZEF9	D3ZEF9	D3ZEF9_RAT	B3gnt2	Hexosyltransferase	1	WYNPILNR	WYNPILNR	2	WYNPILNR2	50517	62560.9	58640.4
A0A8I6A371	A0A8I6A371	A0A8I6A371_RAT	Nmi	N-myc (and STAT) interactor	1	WYNVTVSPFIER	WYNVTVSPFIER	2	WYNVTVSPFIER2	21245.1	19938.6	21405.7
Q5U1X1	Q5U1X1	ORN_RAT	Rexo2	Oligoribonuclease, mitochondrial	1	WYPEDYEFAPK	WYPEDYEFAPK	2	WYPEDYEFAPK2	26573	48580.4	32417.2
B5DFF2	B5DFF2	B5DFF2_RAT	Rbpms2	RNA binding protein, mRNA processing factor 2	1	WYPSSDTAQQGWK	WYPSSDTAQQGWK	2	WYPSSDTAQQGWK2	66977.7	80671.7	64379
Q10473	Q10473;Q6UE39	GALT1_RAT	Galnt1	Polypeptide N-acetylgalactosaminyltransferase 1	0	WYPVPQR	WYPVPQR	2	WYPVPQR2	193157	185495	183483
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	WYQADNPPADLLLTEDEFLSFLHPEHSR	WYQADNPPADLLLTEDEFLSFLHPEHSR	4	WYQADNPPADLLLTEDEFLSFLHPEHSR4	10693.6	29179.8	10957.4
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	WYQFSILAR	WYQFSILAR	2	WYQFSILAR2	6475.11	8448.91	8224.23
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	WYQMGAYQPFFR	WYQMGAYQPFFR	2	WYQMGAYQPFFR2	307212	359745	321106
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	WYQMGAYQPFFR	WYQMGAYQPFFR	3	WYQMGAYQPFFR3	25371.2	27025.7	33801.8
P18292	P18292	THRB_RAT	F2	Prothrombin	1	WYQMGIVSWGEGCDR	WYQMGIVSWGEGC(UniMod:4)DR	2	WYQMGIVSWGEGC(UniMod:4)DR2	78571	67682	62927.3
P18292	P18292	THRB_RAT	F2	Prothrombin	1	WYQMGIVSWGEGCDR	WYQMGIVSWGEGC(UniMod:4)DR	3	WYQMGIVSWGEGC(UniMod:4)DR3	495054	544798	514186
P18292	P18292	THRB_RAT	F2	Prothrombin	1	WYQMGIVSWGEGCDRNGK	WYQMGIVSWGEGC(UniMod:4)DRNGK	3	WYQMGIVSWGEGC(UniMod:4)DRNGK3	314393	458618	413183
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	WYSMKETTMK	WYSMKETTMK	2	WYSMKETTMK2	10100.6	8078.6	6531.61
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	WYSMKETTMK	WYSMKETTMK	3	WYSMKETTMK3	40006.9	46199.3	57036.8
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	WYSTSAFSR	WYSTSAFSR	2	WYSTSAFSR2	60759.6	47473.2	60791.1
Q8R2H5	Q8R2H5	PHLD_RAT	Gpld1	Phosphatidylinositol-glycan-specific phospholipase D	1	WYVPIQDLLR	WYVPIQDLLR	2	WYVPIQDLLR2	2.51165e+06	2.88346e+06	2.95224e+06
A0A8I5ZVG9	A0A8I5ZVG9	A0A8I5ZVG9_RAT	Ap1s2	AP complex subunit sigma	1	WYVPLSDKEK	WYVPLSDKEK	3	WYVPLSDKEK3	6595.23		4660.46
Q6P7S1	Q6P7S1	ASAH1_RAT	Asah1	Acid ceramidase	1	WYVVQTNYDR	WYVVQTNYDR	2	WYVVQTNYDR2	52469	51658	43652.4
B2RYS2	F7FFF0;B2RYS2	B2RYS2_RAT	Uqcrb	Cytochrome b-c1 complex subunit 7	0	WYYNAAGFNK	WYYNAAGFNK	2	WYYNAAGFNK2	241874	250387	267141
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	YAACNAVGQMATDFAPGFQK	YAAC(UniMod:4)NAVGQMATDFAPGFQK	3	YAAC(UniMod:4)NAVGQMATDFAPGFQK3	17974.3	30275.1	21246.8
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	YAADINSR	YAADINSR	2	YAADINSR2	13650.3		10424.4
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	YAAEIAENR	YAAEIAENR	2	YAAEIAENR2	701654	718128	772280
P27139	P27139	CAH2_RAT	Ca2	Carbonic anhydrase 2	1	YAAELHLVHWNTK	YAAELHLVHWNTK	3	YAAELHLVHWNTK3	20209.9	23675.5	12033.3
P27139	P27139	CAH2_RAT	Ca2	Carbonic anhydrase 2	1	YAAELHLVHWNTK	YAAELHLVHWNTK	4	YAAELHLVHWNTK4	4699.78	3174.63	7384.36
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	YAAGHTVHLSSCR	YAAGHTVHLSSC(UniMod:4)R	2	YAAGHTVHLSSC(UniMod:4)R2	12791.6	14489.4	5432.92
G3V6X1	G3V6X1	G3V6X1_RAT	Fbln2	Fibulin 2	1	YAAGHTVHLSSCR	YAAGHTVHLSSC(UniMod:4)R	3	YAAGHTVHLSSC(UniMod:4)R3	288523	288385	195993
Q5XIC4	Q5XIC4	SPG21_RAT	Spg21	Maspardin	1	YAAIDPSVVSAEELDVQK	YAAIDPSVVSAEELDVQK	2	YAAIDPSVVSAEELDVQK2	24156.3	24990.7	27467.3
A1L1K3	A1L1K3	APC5_RAT	Anapc5	Anaphase-promoting complex subunit 5	1	YAALNLAALHCR	YAALNLAALHC(UniMod:4)R	3	YAALNLAALHC(UniMod:4)R3	1295.28		
Q5U2Z3	Q5U2Z3	NP1L4_RAT	Nap1l4	Nucleosome assembly protein 1-like 4	1	YAALYQPLFDK	YAALYQPLFDK	2	YAALYQPLFDK2	364774	359932	353073
Q5U2Z3	Q5U2Z3	NP1L4_RAT	Nap1l4	Nucleosome assembly protein 1-like 4	1	YAALYQPLFDKR	YAALYQPLFDKR	3	YAALYQPLFDKR3	24559.6	17746.7	16145.1
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	YAASENVFNR	YAASENVFNR	2	YAASENVFNR2	39131.8	47060.3	53842.9
D3ZY86	D3ZY86	D3ZY86_RAT	Tango2	Transport and golgi organization 2 homolog	1	YAAVCVR	YAAVC(UniMod:4)VR	2	YAAVC(UniMod:4)VR2			5235.74
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	YAAVTQFEATDAR	YAAVTQFEATDAR	2	YAAVTQFEATDAR2	13543.6	15266.7	14228.3
F1M1H0	F1M1H0	F1M1H0_RAT	Dera	deoxyribose-phosphate aldolase	1	YAAYHDLPMS	YAAYHDLPMS	2	YAAYHDLPMS2	16005.9	19000.6	18791.9
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	YACACPPGYQGR	YAC(UniMod:4)AC(UniMod:4)PPGYQGR	2	YAC(UniMod:4)AC(UniMod:4)PPGYQGR2	63266.2	70549	72612.6
A0A0G2K2W2	A0A0G2K2W2	A0A0G2K2W2_RAT	Cmc4	Uncharacterized protein	1	YACELQK	YAC(UniMod:4)ELQK	2	YAC(UniMod:4)ELQK2	6670.59	7421.45	10571.3
B5DEG8	B5DEG8	B5DEG8_RAT	Sec24c	SEC24 homolog C, COPII coat complex component	1	YACFQVENDQER	YAC(UniMod:4)FQVENDQER	2	YAC(UniMod:4)FQVENDQER2	5070.08	6740.58	3126.79
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	YADAGTVQDMLR	YADAGTVQDMLR	2	YADAGTVQDMLR2	11100.2	12236.2	14070.6
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	YADALLSVK	YADALLSVK	2	YADALLSVK2	21584.6	29409.3	22557.1
Q63942	P63012;Q63942	RAB3D_RAT	Rab3d	GTP-binding protein Rab-3D	0	YADDSFTPAFVSTVGIDFK	YADDSFTPAFVSTVGIDFK	3	YADDSFTPAFVSTVGIDFK3	3628.07	6822.46	
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	YADEEIPR	YADEEIPR	2	YADEEIPR2	13421	6433.41	11747.6
Q66HA4	Q66HA4	TAXB1_RAT	Tax1bp1	Tax1-binding protein 1 homolog	1	YADELAQMELK	YADELAQMELK	2	YADELAQMELK2	13375.4	9385.37	11230.2
Q68A21	Q68A21	PURB_RAT	Purb	Transcriptional activator protein Pur-beta	1	YADEMKEIQER	YADEMKEIQER	3	YADEMKEIQER3	66818.6	78447.8	83196.6
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	YADFAPSLLQVWK	YADFAPSLLQVWK	2	YADFAPSLLQVWK2	9687.02	23140.9	18664.1
Q9EQG6	Q9EQG6	KDIS_RAT	Kidins220	Kinase D-interacting substrate of 220 kDa	1	YADIDIR	YADIDIR	2	YADIDIR2	8474.55	9578.86	7559.53
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	YADITVTSSK	YADITVTSSK	2	YADITVTSSK2	73444.5	58671.5	67483.2
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	YADIVTTTTHK	YADIVTTTTHK	2	YADIVTTTTHK2	22259.1	16637.3	11908
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	YADIVTTTTHK	YADIVTTTTHK	3	YADIVTTTTHK3	42768.5	31271	38691.7
Q6AYH5	Q6AYH5	DCTN2_RAT	Dctn2	Dynactin subunit 2	1	YADLPGIAR	YADLPGIAR	2	YADLPGIAR2	567207	555968	612947
P40329	P40329	SYRC_RAT	Rars1	Arginine--tRNA ligase, cytoplasmic	1	YADLSHNR	YADLSHNR	2	YADLSHNR2	11393.7	14936.1	13072
P25113	P25113	PGAM1_RAT	Pgam1	Phosphoglycerate mutase 1	1	YADLTEDQLPSCESLK	YADLTEDQLPSC(UniMod:4)ESLK	2	YADLTEDQLPSC(UniMod:4)ESLK2	68994.6	64576.8	67658.4
P25113	P25113	PGAM1_RAT	Pgam1	Phosphoglycerate mutase 1	1	YADLTEDQLPSCESLK	YADLTEDQLPSC(UniMod:4)ESLK	3	YADLTEDQLPSC(UniMod:4)ESLK3	30124.2	22434.8	31355.2
A0A8I5ZS34	A0A8I5ZS34	A0A8I5ZS34_RAT	Ctdsp1	protein-serine/threonine phosphatase	1	YADPVADLLDK	YADPVADLLDK	2	YADPVADLLDK2	10029.9	5871.82	21174.6
A0A8I5ZS34	A0A8I5ZS34	A0A8I5ZS34_RAT	Ctdsp1	protein-serine/threonine phosphatase	1	YADPVADLLDKWGAFR	YADPVADLLDKWGAFR	3	YADPVADLLDKWGAFR3	2505.13		2492.41
M0R4W4	M0R4W4	M0R4W4_RAT	Ctdspl	protein-serine/threonine phosphatase	1	YADPVADLLDR	YADPVADLLDR	2	YADPVADLLDR2	30424.5	21305.2	31234.6
D3ZHA0	D3ZHA0	FLNC_RAT	Flnc	Filamin-C	1	YADQEVPR	YADQEVPR	2	YADQEVPR2	4730.25	3807.95	4559.63
B5DF24	B5DF24;Q9QYG8	B5DF24_RAT	Uck1	Uridine-cytidine kinase	0	YADVIIPR	YADVIIPR	2	YADVIIPR2	11492.1	10696.5	16537
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	YAEAAALLIR	YAEAAALLIR	2	YAEAAALLIR2	28167.3	36116.8	30673.3
Q4V884	Q4V884	Q4V884_RAT	Cdc16	CDC16 cell division cycle 16 homolog (S. cerevisiae)	1	YAEALDYHR	YAEALDYHR	2	YAEALDYHR2	5498.07	8755.66	3527.03
P16617	P16617	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	1	YAEAVAR	YAEAVAR	2	YAEAVAR2	327467	296542	345776
P36970	P36970	GPX4_RAT	Gpx4	Phospholipid hydroperoxide glutathione peroxidase	1	YAECGLR	YAEC(UniMod:4)GLR	2	YAEC(UniMod:4)GLR2	216677	228010	235669
Q5FWU0	Q5FWU0	Q5FWU0_RAT	Wasf2	Wiskott-Aldrich syndrome protein family member	1	YAEDIFGEICTQASAFASR	YAEDIFGEIC(UniMod:4)TQASAFASR	3	YAEDIFGEIC(UniMod:4)TQASAFASR3	24561.8	21463.7	21204.9
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	YAEEDRR	YAEEDRR	2	YAEEDRR2			86356.9
P84903	P84903	STIM1_RAT	Stim1	Stromal interaction molecule 1	1	YAEEELEQVR	YAEEELEQVR	2	YAEEELEQVR2	395907	393228	410009
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	YAEEQQDLALLSISTFQR	YAEEQQDLALLSISTFQR	3	YAEEQQDLALLSISTFQR3	34524.9	24046.1	28312.9
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	YAEIPDESR	YAEIPDESR	2	YAEIPDESR2	19202.2	8642.01	16591.7
P62815	P62815	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	1	YAEIVHLTLPDGTK	YAEIVHLTLPDGTK	3	YAEIVHLTLPDGTK3	22942.8	31896.2	34128.2
P62815	P62815	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	1	YAEIVHLTLPDGTKR	YAEIVHLTLPDGTKR	3	YAEIVHLTLPDGTKR3	10053.2	10961.5	10477.3
P62815	P62815	VATB2_RAT	Atp6v1b2	V-type proton ATPase subunit B, brain isoform	1	YAEIVHLTLPDGTKR	YAEIVHLTLPDGTKR	4	YAEIVHLTLPDGTKR4	22931.9	11573.8	15597.4
F7EKI5	F7EKI5	F7EKI5_RAT	Pcdh18	Protocadherin 18	1	YAELIVVK	YAELIVVK	2	YAELIVVK2	45328.6	41701.1	31603
B2GV14	B2GV14	B2GV14_RAT	Txlna	Taxilin alpha	1	YAELLEEHR	YAELLEEHR	3	YAELLEEHR3	6647.76		3383.38
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	YAELLLIPK	YAELLLIPK	2	YAELLLIPK2	1781.55	2299.56	1469.01
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	YAELLVSQGVVNQPEYEEEISK	YAELLVSQGVVNQPEYEEEISK	3	YAELLVSQGVVNQPEYEEEISK3	42589.7	42573.6	44372.6
Q1HCL7	Q1HCL7	NAKD2_RAT	Nadk2	NAD kinase 2, mitochondrial	1	YAELSEEDLK	YAELSEEDLK	2	YAELSEEDLK2	4719.52	2966.94	2451.92
A0A8I5ZZM0	A0A8I5ZZM0	A0A8I5ZZM0_RAT	Hectd4	HECT domain E3 ubiquitin protein ligase 4	1	YAESILENGSSSGR	YAESILENGSSSGR	2	YAESILENGSSSGR2	1710.42	2892.97	
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	YAESLSEAMEK	YAESLSEAMEK	2	YAESLSEAMEK2	25760.4	22406.4	27351.4
D3ZCG1	D3ZCG1	D3ZCG1_RAT	Dipk2b	Divergent protein kinase domain 2B	1	YAEVVDAGSIFMDHFTDRDK	YAEVVDAGSIFMDHFTDRDK	4	YAEVVDAGSIFMDHFTDRDK4	4251.26	4721.32	7774.81
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	YAEYFLR	YAEYFLR	2	YAEYFLR2	22527.4	17043	12577.1
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	YAEYFLRPMLQYVCDNSPEVR	YAEYFLRPMLQYVC(UniMod:4)DNSPEVR	3	YAEYFLRPMLQYVC(UniMod:4)DNSPEVR3	18547.6	28729.2	21215.4
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	YAEYFLRPMLQYVCDNSPEVR	YAEYFLRPMLQYVC(UniMod:4)DNSPEVR	4	YAEYFLRPMLQYVC(UniMod:4)DNSPEVR4	3925.63		
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	YAFEVAQPDFELHAITGEITNTHK	YAFEVAQPDFELHAITGEITNTHK	3	YAFEVAQPDFELHAITGEITNTHK3	7688	13487.6	
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	YAFEVAQPDFELHAITGEITNTHK	YAFEVAQPDFELHAITGEITNTHK	4	YAFEVAQPDFELHAITGEITNTHK4	29212.8	30081	20604.1
A0A8I5ZKJ3	A0A8I5ZKJ3	A0A8I5ZKJ3_RAT	Ndufa2	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2	1	YAFGQEK	YAFGQEK	2	YAFGQEK2	89939.6	91187.4	83208.1
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	YAFHMILAGHR	YAFHMILAGHR	3	YAFHMILAGHR3	6021.93	3398.91	4202.04
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	YAFLLDK	YAFLLDK	2	YAFLLDK2	68308.3	87820.3	62343.6
Q62784	Q62784	INP4A_RAT	Inpp4a	Inositol polyphosphate-4-phosphatase type I A	1	YAFNSLQLK	YAFNSLQLK	2	YAFNSLQLK2	4924.8		5750.22
A0A8I5ZZF0	A0A8I5ZZF0	A0A8I5ZZF0_RAT	Itih5	Inter-alpha-trypsin inhibitor heavy chain 5	1	YAFTTVSCR	YAFTTVSC(UniMod:4)R	2	YAFTTVSC(UniMod:4)R2		1871.27	2278.22
Q63598	Q63598;Q5XI38	PLST_RAT	Pls3	Plastin-3	0	YAFVNWINK	YAFVNWINK	2	YAFVNWINK2	72849.2	70708.8	78180.9
Q8R553	Q8R553	CSTN3_RAT	Clstn3	Calsyntenin-3	1	YAGEICGFR	YAGEIC(UniMod:4)GFR	2	YAGEIC(UniMod:4)GFR2	21022.7	19154.4	17847.6
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	YAGEVHGMIR	YAGEVHGMIR	2	YAGEVHGMIR2	3777.74	4533.04	3281.89
Q6P799	Q6P799	SYSC_RAT	Sars1	Serine--tRNA ligase, cytoplasmic	1	YAGFSTCFR	YAGFSTC(UniMod:4)FR	2	YAGFSTC(UniMod:4)FR2	34842.1	24357.3	29231.4
A0A8I6AE33	A0A8I6AE33	A0A8I6AE33_RAT	Wdr37	WD repeat domain 37	1	YAGHVGSVNSIK	YAGHVGSVNSIK	2	YAGHVGSVNSIK2	1221.61	3765.07	
A0A8I6AE33	A0A8I6AE33	A0A8I6AE33_RAT	Wdr37	WD repeat domain 37	1	YAGHVGSVNSIK	YAGHVGSVNSIK	3	YAGHVGSVNSIK3	42804.7	66167.3	65191.8
P63004	P63004	LIS1_RAT	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha	1	YAGLLEK	YAGLLEK	2	YAGLLEK2	71480.6	44474.4	61347.9
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	YAGLQGLMSVLAEIRPK	YAGLQGLMSVLAEIRPK	3	YAGLQGLMSVLAEIRPK3	3494.34	3866.61	3732.35
A0A0G2K8Z9	A0A0G2K8Z9	A0A0G2K8Z9_RAT	Kif13b	Kinesin family member 13B	1	YAGQDDVFK	YAGQDDVFK	2	YAGQDDVFK2	24939.2	36338.6	32417.3
A0A8I6A5Y0	A0A8I6A5Y0	A0A8I6A5Y0_RAT	Vta1	Vesicle trafficking 1	1	YAGSALQYEDVSTAVQNLQK	YAGSALQYEDVSTAVQNLQK	3	YAGSALQYEDVSTAVQNLQK3	10980.4	8797.13	6578.64
Q53B90	Q53B90	RAB43_RAT	Rab43	Ras-related protein Rab-43	1	YAGSNIVQLLIGNK	YAGSNIVQLLIGNK	2	YAGSNIVQLLIGNK2	15929.2	13258.6	13372.4
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	YAGTSFSLQR	YAGTSFSLQR	2	YAGTSFSLQR2	88820.4	97678.1	84884.9
Q499P3	Q499P3	C1GLC_RAT	C1galt1c1	C1GALT1-specific chaperone 1	1	YAGVFAENAEDADGK	YAGVFAENAEDADGK	2	YAGVFAENAEDADGK2	3227.12	4862.96	4771.22
P26051	P26051	CD44_RAT	Cd44	CD44 antigen	1	YAGVFHVEK	YAGVFHVEK	2	YAGVFHVEK2	967684	902849	874936
B0BNG0	B0BNG0	EMC2_RAT	Emc2	ER membrane protein complex subunit 2	1	YAGWAANQINR	YAGWAANQINR	2	YAGWAANQINR2	34002.5	40144.2	51715.4
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	YAGYPMLIR	YAGYPMLIR	2	YAGYPMLIR2	23728.7	28916.3	17555.1
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	YAHQSGFHVDR	YAHQSGFHVDR	2	YAHQSGFHVDR2	13500.2	2924.41	5919.02
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	YAHQSGFHVDR	YAHQSGFHVDR	3	YAHQSGFHVDR3	19309.5	8996.48	4281.57
P62271	D3ZM33;D4AA93;P62271;A0A0G2KA79;D3ZAU6	RS18_RAT	Rps18	Small ribosomal subunit protein uS13	0	YAHVVLR	YAHVVLR	2	YAHVVLR2	14271.5	16337.2	5902.18
D3ZER6	D3ZER6	D3ZER6_RAT	Tnpo2	Transportin 2	1	YAHWVVSQPPDMHLKPLMTELLK	YAHWVVSQPPDMHLKPLMTELLK	4	YAHWVVSQPPDMHLKPLMTELLK4	29259.1	29063.7	30716.9
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	YAHWVVSQPPDTYLKPLMTELLK	YAHWVVSQPPDTYLKPLMTELLK	3	YAHWVVSQPPDTYLKPLMTELLK3	8644.04	8657.43	
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	YAHWVVSQPPDTYLKPLMTELLK	YAHWVVSQPPDTYLKPLMTELLK	4	YAHWVVSQPPDTYLKPLMTELLK4	43228.1	80413.3	49347.7
A0A8I5ZWR1	A0A8I5ZWR1	A0A8I5ZWR1_RAT	ENSRNOG00000069249	Ig-like domain-containing protein	1	YAHWYQQKPDK	YAHWYQQKPDK	3	YAHWYQQKPDK3	13408.3	8447.4	
P13264	P13264	GLSK_RAT	Gls	Glutaminase kidney isoform, mitochondrial	1	YAIAVNDLGTEYVHR	YAIAVNDLGTEYVHR	3	YAIAVNDLGTEYVHR3			3363.66
P50878	P50878	RL4_RAT	Rpl4	Large ribosomal subunit protein uL4	1	YAICSALAASALPALVMSK	YAIC(UniMod:4)SALAASALPALVMSK	2	YAIC(UniMod:4)SALAASALPALVMSK2	10229.3	5006.35	4654.26
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	YAIDSVLEVHIR	YAIDSVLEVHIR	3	YAIDSVLEVHIR3		3454.84	
P17764	P17764	THIL_RAT	Acat1	Acetyl-CoA acetyltransferase, mitochondrial	1	YAIGSYTR	YAIGSYTR	2	YAIGSYTR2	233253	341683	293310
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	YAIGVGQAFYQAQSR	YAIGVGQAFYQAQSR	2	YAIGVGQAFYQAQSR2	100336	86913.6	107027
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	YAIGVGQAFYQAQSR	YAIGVGQAFYQAQSR	3	YAIGVGQAFYQAQSR3	19601.9	23200.3	18987.4
A0A0G2JTT6	A0A0G2JTT6	A0A0G2JTT6_RAT	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	1	YAINNCR	YAINNC(UniMod:4)R	2	YAINNC(UniMod:4)R2	4905.68	6349.43	3203.24
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	YAIPCLIGISR	YAIPC(UniMod:4)LIGISR	2	YAIPC(UniMod:4)LIGISR2	51462.2	60087.1	57173.7
A0A8I5ZNN3	A0A8I5ZNN3	A0A8I5ZNN3_RAT	Ruvbl2	RuvB-like helicase	1	YAIQLITAASLVCR	YAIQLITAASLVC(UniMod:4)R	2	YAIQLITAASLVC(UniMod:4)R2			35856.8
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	YAISMAR	YAISMAR	2	YAISMAR2	74467.5	63733.5	58768.7
A0A0G2QC04	A0A0G2QC04	A0A0G2QC04_RAT	Pls1	Plastin 1	1	YAISVAR	YAISVAR	2	YAISVAR2	168628	154936	166845
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	YAIYFSQTGHPEDK	YAIYFSQTGHPEDK	2	YAIYFSQTGHPEDK2	1846.33	4536.86	4589.76
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	YAIYFSQTGHPEDK	YAIYFSQTGHPEDK	3	YAIYFSQTGHPEDK3	59810.7	53280.7	63567.5
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	YAIYFSQTGHPEDKVR	YAIYFSQTGHPEDKVR	3	YAIYFSQTGHPEDKVR3	11492.1	8127.56	12363.2
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	YAIYFSQTGHPEDKVR	YAIYFSQTGHPEDKVR	4	YAIYFSQTGHPEDKVR4	10270.6	6254.76	3031.76
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	YALFSPSDHR	YALFSPSDHR	2	YALFSPSDHR2	19277.1	26233.6	17864.8
A0A0G2K6W6	A0A0G2K6W6	A0A0G2K6W6_RAT	Dis3l2	DIS3-like exonuclease 2	1	YALFSPSDHR	YALFSPSDHR	3	YALFSPSDHR3	32374.9	24755.1	37889.8
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	YALICQQCFSHNGMALK	YALIC(UniMod:4)QQC(UniMod:4)FSHNGMALK	3	YALIC(UniMod:4)QQC(UniMod:4)FSHNGMALK3	80982.5	60498.9	59247.1
A0A8I6AVM8	A0A8I6AVM8	A0A8I6AVM8_RAT	Lnpk	Endoplasmic reticulum junction formation protein lunapark	1	YALICQQCFSHNGMALKEEFEYIAFR	YALIC(UniMod:4)QQC(UniMod:4)FSHNGMALKEEFEYIAFR	4	YALIC(UniMod:4)QQC(UniMod:4)FSHNGMALKEEFEYIAFR4	15563.1	18708.7	19108.2
D4A589	D4A589	D4A589_RAT	Smg6	Telomerase-binding protein EST1A	1	YALISAQR	YALISAQR	2	YALISAQR2	5742.63	6847.43	8389.5
P08494	P08494	MGP_RAT	Mgp	Matrix Gla protein	1	YALIYGYNAAYNR	YALIYGYNAAYNR	2	YALIYGYNAAYNR2	1.23586e+06	1.50072e+06	1.41743e+06
P08494	P08494	MGP_RAT	Mgp	Matrix Gla protein	1	YALIYGYNAAYNR	YALIYGYNAAYNR	3	YALIYGYNAAYNR3	47742	71146.7	70227.4
A0A8I6A4S8	A0A8I6A4S8	A0A8I6A4S8_RAT	Exoc3l2	Exocyst complex component 3-like 2	1	YALLHWHNQVYPR	YALLHWHNQVYPR	4	YALLHWHNQVYPR4		8105.95	
P13437	P13437	THIM_RAT	Acaa2	3-ketoacyl-CoA thiolase, mitochondrial	1	YALQSQQR	YALQSQQR	2	YALQSQQR2	194671	155754	207181
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	YALSFMTCTK	YALSFMTC(UniMod:4)TK	2	YALSFMTC(UniMod:4)TK2		28912.3	21712.4
P51635	P51635	AK1A1_RAT	Akr1a1	Aldo-keto reductase family 1 member A1	1	YALSVGYR	YALSVGYR	2	YALSVGYR2	39888.1	42220.1	44042.1
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	YALTFGVR	YALTFGVR	2	YALTFGVR2	69159.8	72947.8	61977.6
P62703	D3ZX01;P62703	RS4X_RAT	Rps4x	Small ribosomal subunit protein eS4	0	YALTGDEVK	YALTGDEVK	2	YALTGDEVK2	20626	18914.1	12639
P62703	D3ZX01;P62703	RS4X_RAT	Rps4x	Small ribosomal subunit protein eS4	0	YALTGDEVKK	YALTGDEVKK	2	YALTGDEVKK2	6559.31	5600.97	1100.38
A0A8I5ZWK0	A0A8I5ZWK0	A0A8I5ZWK0_RAT	Drg2	Developmentally regulated GTP binding protein 2	1	YALVWGTSTK	YALVWGTSTK	2	YALVWGTSTK2	84302.4	123500	98062.9
Q8R492	Q8R492	Q8R492_RAT	Fap	Fibroblast activation protein, alpha	1	YALWWSPDGK	YALWWSPDGK	2	YALWWSPDGK2	15352.9	11396.6	17435.8
Q7M0E3	D4A315;Q7M0E3	DEST_RAT	Dstn	Destrin	0	YALYDASFETK	YALYDASFETK	2	YALYDASFETK2	280554	237427	256815
P45592	M0RC65;P45592	COF1_RAT	Cfl1	Cofilin-1	0	YALYDATYETK	YALYDATYETK	2	YALYDATYETK2	1.88123e+06	1.73812e+06	1.8414e+06
D3ZFJ6	D3ZFJ6	D3ZFJ6_RAT	Lactb	Lactamase, beta	1	YAMAWGVVEK	YAMAWGVVEK	2	YAMAWGVVEK2	20148.7	25225.5	20802.6
P04905	P04905	GSTM1_RAT	Gstm1	Glutathione S-transferase Mu 1	1	YAMGDAPDYDR	YAMGDAPDYDR	2	YAMGDAPDYDR2	14779.9	10174.3	12014.1
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	YAMMFAELK	YAMMFAELK	2	YAMMFAELK2	6633.66	12117.3	11871
D3ZQ80	D3ZQ80	D3ZQ80_RAT	Smg8	Nonsense-mediated mRNA decay factor SMG8	1	YAMQLHEDCYK	YAMQLHEDC(UniMod:4)YK	3	YAMQLHEDC(UniMod:4)YK3	28951.2	28926.7	26466.4
Q27W02	Q27W02;F1M0X6	MGN_RAT	Magoh	Protein mago nashi homolog	0	YANNSNYK	YANNSNYK	2	YANNSNYK2			10864
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	YAPDAFFNFPGK	YAPDAFFNFPGK	2	YAPDAFFNFPGK2	62426.7	76384.4	83162.1
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	YAPENLDEQIK	YAPENLDEQIK	2	YAPENLDEQIK2	21093.5		22724.7
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	YAPENLDEQIKK	YAPENLDEQIKK	3	YAPENLDEQIKK3	51667.9	47491.7	48379.4
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	YAPGATSVSPGR	YAPGATSVSPGR	2	YAPGATSVSPGR2	20011.7	15039.4	16729.9
Q6AYD0	Q6AYD0	Q6AYD0_RAT	Lrrc17	Leucine rich repeat containing 17	1	YAPGLPCDVYTYLHEK	YAPGLPC(UniMod:4)DVYTYLHEK	3	YAPGLPC(UniMod:4)DVYTYLHEK3		2404.43	8767.8
Q561S0	A0A1W2Q6F8;Q561S0	NDUAA_RAT	Ndufa10	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial	0	YAPGYNADVGDK	YAPGYNADVGDK	2	YAPGYNADVGDK2	156294	129136	152550
Q561S0	A0A1W2Q6F8;Q561S0	NDUAA_RAT	Ndufa10	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial	0	YAPGYNADVGDKWIWLK	YAPGYNADVGDKWIWLK	3	YAPGYNADVGDKWIWLK3	16571.5	6210.89	9024.41
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	YAPISGGDHAEIDVPK	YAPISGGDHAEIDVPK	2	YAPISGGDHAEIDVPK2	170155	163703	190366
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	YAPISGGDHAEIDVPK	YAPISGGDHAEIDVPK	3	YAPISGGDHAEIDVPK3	1.349e+06	1.53036e+06	1.58048e+06
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	YAPLGWSK	YAPLGWSK	2	YAPLGWSK2	514061	589480	602195
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	YAPLHLVPLIER	YAPLHLVPLIER	2	YAPLHLVPLIER2	121033	89719.5	86778.6
D4A8H8	D4A8H8;A0A0G2JT63	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	0	YAPLHLVPLIER	YAPLHLVPLIER	3	YAPLHLVPLIER3	292229	310029	274096
P58200	P58200	VTI1B_RAT	Vti1b	Vesicle transport through interaction with t-SNAREs homolog 1B	1	YAPLTFR	YAPLTFR	2	YAPLTFR2	74317.7	70510.6	63806.5
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	YAPSCAK	YAPSC(UniMod:4)AK	2	YAPSC(UniMod:4)AK2			55615.8
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	YAPSETGPNGISAEVMDTYVK	YAPSETGPNGISAEVMDTYVK	3	YAPSETGPNGISAEVMDTYVK3	4414.21	5489.66	
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	YAPSGFYIASGDISGK	YAPSGFYIASGDISGK	2	YAPSGFYIASGDISGK2	612055	548114	619393
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	YAPSGFYIASGDISGK	YAPSGFYIASGDISGK	3	YAPSGFYIASGDISGK3	28410.4	47288.2	36910.1
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	YAPSYTPSAPMDTNLLSNIQK	YAPSYTPSAPMDTNLLSNIQK	3	YAPSYTPSAPMDTNLLSNIQK3	8691.96	10119.2	10031.4
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	YAPTEVGLHEMHIK	YAPTEVGLHEMHIK	4	YAPTEVGLHEMHIK4	13069.5	8231.34	11430.6
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	YAQDDFVLDHSECR	YAQDDFVLDHSEC(UniMod:4)R	2	YAQDDFVLDHSEC(UniMod:4)R2	1481.82	1987.08	1265.41
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	YAQDDFVLDHSECR	YAQDDFVLDHSEC(UniMod:4)R	3	YAQDDFVLDHSEC(UniMod:4)R3	21988	25017.8	25299.7
P80067	P80067	CATC_RAT	Ctsc	Dipeptidyl peptidase 1	1	YAQDFGVVEENCFPYTATDAPCKPK	YAQDFGVVEENC(UniMod:4)FPYTATDAPC(UniMod:4)KPK	3	YAQDFGVVEENC(UniMod:4)FPYTATDAPC(UniMod:4)KPK3	13390.9	7977.76	12396.7
Q62632	Q62632	FSTL1_RAT	Fstl1	Follistatin-related protein 1	1	YAQELQK	YAQELQK	2	YAQELQK2	79240.4	77916.3	69864.1
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	YAQEVADLK	YAQEVADLK	2	YAQEVADLK2	180151	171760	197735
Q9QZ81	Q9QZ81;F1LUS2;A0A8I5ZP12	AGO2_RAT	Ago2	Protein argonaute-2	0	YAQGADSVEPMFR	YAQGADSVEPMFR	2	YAQGADSVEPMFR2	4864.98	3107.61	
A0A0G2K618	A0A0G2K618	A0A0G2K618_RAT	Large1	LARGE xylosyl- and glucuronyltransferase 1	1	YAQGSEVLMSR	YAQGSEVLMSR	2	YAQGSEVLMSR2	4770.71	4267.16	7586.71
Q91XJ1	Q91XJ1	BECN1_RAT	Becn1	Beclin-1	1	YAQMQLDK	YAQMQLDK	2	YAQMQLDK2	25701.9	13571.6	
P07872	P07872	ACOX1_RAT	Acox1	Peroxisomal acyl-coenzyme A oxidase 1	1	YAQVKPDGTYVKPLSNK	YAQVKPDGTYVKPLSNK	4	YAQVKPDGTYVKPLSNK4	11343.5	7929.37	12272.6
A0A8I6B265	A0A8I6B265	A0A8I6B265_RAT	ENSRNOG00000064806	Ig-like domain-containing protein	1	YAQWYQQKPDK	YAQWYQQKPDK	3	YAQWYQQKPDK3	5360.11	3148.49	8666.09
A0A0G2JZS9	A0A0G2JZS9	A0A0G2JZS9_RAT	AABR07034736.1	Ig-like domain-containing protein	1	YAQWYQQKPDQSIVTVIYEDSK	YAQWYQQKPDQSIVTVIYEDSK	3	YAQWYQQKPDQSIVTVIYEDSK3	12760.4	10217.1	6757.93
P35284	P35284	RAB12_RAT	Rab12	Ras-related protein Rab-12	1	YASEDAELLLVGNK	YASEDAELLLVGNK	2	YASEDAELLLVGNK2	15225.2	13402.9	18165
P10536	Q6NYB7;P10536	RAB1B_RAT	Rab1b	Ras-related protein Rab-1B	0	YASENVNK	YASENVNK	1	YASENVNK1			2204.06
P10536	Q6NYB7;P10536	RAB1B_RAT	Rab1b	Ras-related protein Rab-1B	0	YASENVNK	YASENVNK	2	YASENVNK2	125000		2.30422e+06
B2RYI2	B2RYI2	B2RYI2_RAT	Srp68	Signal recognition particle subunit SRP68	1	YASEVSSHGGAFK	YASEVSSHGGAFK	3	YASEVSSHGGAFK3	8301.52	10262.5	7473.15
F1M9Z5	F1M9Z5	F1M9Z5_RAT	Cd300le	Cd300 molecule-like family member E	1	YASGWEDYRK	YASGWEDYRK	2	YASGWEDYRK2	80444.4	51016.7	55758.5
F1M9Z5	F1M9Z5	F1M9Z5_RAT	Cd300le	Cd300 molecule-like family member E	1	YASGWEDYRK	YASGWEDYRK	3	YASGWEDYRK3	560970	599974	612279
A0A8I5ZTN5	A0A8I5ZTN5	A0A8I5ZTN5_RAT	Adsl	Adenylosuccinate lyase	1	YASHEMCFLFSDR	YASHEMC(UniMod:4)FLFSDR	3	YASHEMC(UniMod:4)FLFSDR3	21169.6	13525.3	18278.8
P05065	Q6AY07;P09117;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	YASICQQNGIVPIVEPEILPDGDHDLK	YASIC(UniMod:4)QQNGIVPIVEPEILPDGDHDLK	4	YASIC(UniMod:4)QQNGIVPIVEPEILPDGDHDLK4	7892.3		2710.46
P05065	Q6AY07;P09117;P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	0	YASICQQNGIVPIVEPEILPDGDHDLKR	YASIC(UniMod:4)QQNGIVPIVEPEILPDGDHDLKR	4	YASIC(UniMod:4)QQNGIVPIVEPEILPDGDHDLKR4	193528	198365	185313
Q9JJ76	Q06486;Q9JJ76	Q9JJ76_RAT	Csnk1e	Casein kinase 1 epsilon	0	YASINTHLGIEQSR	YASINTHLGIEQSR	3	YASINTHLGIEQSR3	5166.49	5725.86	10195.1
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	YASLCGK	YASLC(UniMod:4)GK	2	YASLC(UniMod:4)GK2	33566.6	40700.1	35845.8
A0A8I6A8L3	A0A8I6A8L3	A0A8I6A8L3_RAT	Dnpep	Aspartyl aminopeptidase	1	YASNAVSESLIR	YASNAVSESLIR	2	YASNAVSESLIR2	54939.7	61972.4	60577.2
A0A8I6AB22	F1M663;A0A8I5ZJM6;A0A8I6AHF2;A0A8I6AB22;A0A8I6AID3;D3ZQR5	A0A8I6AB22_RAT	ENSRNOG00000067079	Ig-like domain-containing protein	0	YASQSISGIPSR	YASQSISGIPSR	2	YASQSISGIPSR2	750358	648424	653391
A0A8I6AB22	F1M663;A0A8I5ZJM6;A0A8I6AHF2;A0A8I6AB22;A0A8I6AID3;D3ZQR5	A0A8I6AB22_RAT	ENSRNOG00000067079	Ig-like domain-containing protein	0	YASQSISGIPSR	YASQSISGIPSR	3	YASQSISGIPSR3	9589.06	13477.8	10485.2
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	YASSYEAWYFLQPR	YASSYEAWYFLQPR	2	YASSYEAWYFLQPR2	209604	219208	214028
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	YASSYEAWYFLQPR	YASSYEAWYFLQPR	3	YASSYEAWYFLQPR3	72490.3	93120.5	82456.5
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	YASVLKQQAAQHSTALLHWGALWR	YASVLKQQAAQHSTALLHWGALWR	4	YASVLKQQAAQHSTALLHWGALWR4	8447.05	22271.5	12972.3
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	YASVSEPAK	YASVSEPAK	2	YASVSEPAK2	17128.2	15428.3	23970.4
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	YASVSER	YASVSER	2	YASVSER2	41618.4	47557.4	45944.8
Q06647	Q06647	ATPO_RAT	Atp5po	ATP synthase subunit O, mitochondrial	1	YATALYSAASK	YATALYSAASK	2	YATALYSAASK2	375174	372658	434065
D4A7H1	D4A7H1	SL9A9_RAT	Slc9a9	Sodium/hydrogen exchanger 9	1	YATAPTDIDSGTVYNCGK	YATAPTDIDSGTVYNC(UniMod:4)GK	2	YATAPTDIDSGTVYNC(UniMod:4)GK2	13875.4	12335.7	15109.4
Q62904	Q62904	DHB7_RAT	Hsd17b7	3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7	1	YATDLLNVALNR	YATDLLNVALNR	2	YATDLLNVALNR2	3665.14	9750.26	4065.11
Q68FW9	Q68FW9	CSN3_RAT	Cops3	COP9 signalosome complex subunit 3	1	YATDTFAGLCHQLTNALVER	YATDTFAGLC(UniMod:4)HQLTNALVER	3	YATDTFAGLC(UniMod:4)HQLTNALVER3	38515.1	29948.7	26325.8
M0R4P9	M0R4P9	M0R4P9_RAT	Ube2h	Ubiquitin-conjugating enzyme E2H	1	YATEEALK	YATEEALK	2	YATEEALK2	38744.5	34675.3	50803.6
F1LRE5	F1LRE5	F1LRE5_RAT	Osbpl9	Oxysterol-binding protein	1	YATGENTVFVDTK	YATGENTVFVDTK	2	YATGENTVFVDTK2	15316.1	10447.3	15493.3
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	YATGGWETVFRPVSETCTDR	YATGGWETVFRPVSETC(UniMod:4)TDR	3	YATGGWETVFRPVSETC(UniMod:4)TDR3	108304	128378	85015.9
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	YATLATVSR	YATLATVSR	2	YATLATVSR2	280551	326074	284304
A0A8I6G6W8	A0A8I6AGW8;A0A8I6G6W8	A0A8I6G6W8_RAT	Prrc2c	Proline-rich coiled-coil 2C	0	YATLSLFNTYK	YATLSLFNTYK	2	YATLSLFNTYK2	14493.8	13876.9	6514.65
Q3B7T9	Q3B7T9	RFIP1_RAT	Rab11fip1	Rab11 family-interacting protein 1	1	YATSVSER	YATSVSER	2	YATSVSER2	14674	20930.7	9766.52
D3ZQK4	D3ZQK4	D3ZQK4_RAT	Txndc16	Thioredoxin domain containing 16	1	YATTLPALLLAR	YATTLPALLLAR	2	YATTLPALLLAR2	4601.47		4597.72
Q62921	Q62921	HOIL1_RAT	Rbck1	RanBP-type and C3HC4-type zinc finger-containing protein 1	1	YATWLAEQK	YATWLAEQK	2	YATWLAEQK2	13166.8	10049.7	12521.5
Q04589	Q04589	FGFR1_RAT	Fgfr1	Fibroblast growth factor receptor 1	1	YATWSIIMDSVVPSDK	YATWSIIMDSVVPSDK	2	YATWSIIMDSVVPSDK2	24677.7	34276.2	42021.2
Q5XIJ6	Q5XIJ6	BABA1_RAT	Babam1	BRISC and BRCA1-A complex member 1	1	YAVALAGPALELHNCVAK	YAVALAGPALELHNC(UniMod:4)VAK	2	YAVALAGPALELHNC(UniMod:4)VAK2	6471.96	1146.79	1787.97
Q5XIJ6	Q5XIJ6	BABA1_RAT	Babam1	BRISC and BRCA1-A complex member 1	1	YAVALAGPALELHNCVAK	YAVALAGPALELHNC(UniMod:4)VAK	3	YAVALAGPALELHNC(UniMod:4)VAK3	65701	58248.7	38070.9
F1LUU1	F1LUU1	F1LUU1_RAT	Itga11	Integrin subunit alpha 11	1	YAVAVLGYYNR	YAVAVLGYYNR	2	YAVAVLGYYNR2	10881.6	11506.5	4951.47
Q6TEK3	Q6TEK3	VKORL_RAT	Vkorc1l1	Vitamin K epoxide reductase complex subunit 1-like protein 1	1	YAVCAAGILLSIYAYHVEREK	YAVC(UniMod:4)AAGILLSIYAYHVEREK	4	YAVC(UniMod:4)AAGILLSIYAYHVEREK4	7719.9	10673.6	
P97682	P97682	ESM1_RAT	Esm1	Endothelial cell-specific molecule 1	1	YAVDCPEHCDNTECR	YAVDC(UniMod:4)PEHC(UniMod:4)DNTEC(UniMod:4)R	3	YAVDC(UniMod:4)PEHC(UniMod:4)DNTEC(UniMod:4)R3	23580.3	31297.9	20795.4
Q5I0D7	Q5I0D7	PEPD_RAT	Pepd	Xaa-Pro dipeptidase	1	YAVDDVQYADEIASVLTSR	YAVDDVQYADEIASVLTSR	3	YAVDDVQYADEIASVLTSR3		2240.61	5059.77
Q6IE70	Q6IE70	PAN2_RAT	Pan2	PAN2-PAN3 deadenylation complex catalytic subunit Pan2	1	YAVETPGVTIMR	YAVETPGVTIMR	2	YAVETPGVTIMR2	7152.67	6106.14	4897.36
G3V7K1	G3V7K1	G3V7K1_RAT	Myom2	Myomesin 2	1	YAVFDLAEGK	YAVFDLAEGK	2	YAVFDLAEGK2	7246.63	4767.73	
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	YAVHSSILCTSK	YAVHSSILC(UniMod:4)TSK	3	YAVHSSILC(UniMod:4)TSK3	4153.16	2493.5	2750.73
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	YAVIGTYDGR	YAVIGTYDGR	2	YAVIGTYDGR2	113551	145781	158789
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	YAVIPLSTNSGLIGWVPHCDTLHALIR	YAVIPLSTNSGLIGWVPHC(UniMod:4)DTLHALIR	4	YAVIPLSTNSGLIGWVPHC(UniMod:4)DTLHALIR4	20758.5	23189.4	24474.7
Q9Z2G8	Q9Z2G8	NP1L1_RAT	Nap1l1	Nucleosome assembly protein 1-like 1	1	YAVLYQPLFDK	YAVLYQPLFDK	2	YAVLYQPLFDK2	1.30212e+06	1.25866e+06	1.5637e+06
Q9Z2G8	Q9Z2G8	NP1L1_RAT	Nap1l1	Nucleosome assembly protein 1-like 1	1	YAVLYQPLFDKR	YAVLYQPLFDKR	2	YAVLYQPLFDKR2		14249.9	
Q9Z2G8	Q9Z2G8	NP1L1_RAT	Nap1l1	Nucleosome assembly protein 1-like 1	1	YAVLYQPLFDKR	YAVLYQPLFDKR	3	YAVLYQPLFDKR3	29695.3	36044	23544.1
Q9JJ50	Q9JJ50	HGS_RAT	Hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate	1	YAVNSIK	YAVNSIK	2	YAVNSIK2	77142.9	49267.3	64533
Q63598	Q63598	PLST_RAT	Pls3	Plastin-3	1	YAVSMAR	YAVSMAR	2	YAVSMAR2	48001.2	37071	44308
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	YAVTFLNLGQIQDHGLSYVR	YAVTFLNLGQIQDHGLSYVR	3	YAVTFLNLGQIQDHGLSYVR3	30671.4	22246.1	22910.5
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	YAVTTGDHGIIR	YAVTTGDHGIIR	2	YAVTTGDHGIIR2	50439.6	38289.6	34862.4
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	YAVTTGDHGIIR	YAVTTGDHGIIR	3	YAVTTGDHGIIR3	251206	322421	278221
Q4V7C7	Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	1	YAVWFGGSMLASTPEFYQVCHTK	YAVWFGGSMLASTPEFYQVC(UniMod:4)HTK	3	YAVWFGGSMLASTPEFYQVC(UniMod:4)HTK3	156599	122684	141015
A0A8I5ZWP3	A0A8I5ZWP3	A0A8I5ZWP3_RAT	Itgax	Integrin subunit alpha X	1	YAVYTVISSHDQFTK	YAVYTVISSHDQFTK	2	YAVYTVISSHDQFTK2		2257.25	
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	YAVYWDELPSEVR	YAVYWDELPSEVR	2	YAVYWDELPSEVR2	31101.3	24133.8	19476.2
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	YAVYWDELPSEVRR	YAVYWDELPSEVRR	3	YAVYWDELPSEVRR3	3466.35	9541.63	9593.64
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	YAWGLNELKPISK	YAWGLNELKPISK	2	YAWGLNELKPISK2	10043.5	4734	8402.11
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	YAWGLNELKPISK	YAWGLNELKPISK	3	YAWGLNELKPISK3	89252.9	93641.5	93628.8
P82450	P82450	SIAE_RAT	Siae	Sialate O-acetylesterase	1	YAWTTWPCEYK	YAWTTWPC(UniMod:4)EYK	2	YAWTTWPC(UniMod:4)EYK2	8358.09	9541.12	8991.16
Q63678	Q63678	ZA2G_RAT	Azgp1	Zinc-alpha-2-glycoprotein	1	YAYDGEDFIEFNK	YAYDGEDFIEFNK	2	YAYDGEDFIEFNK2	45454.6	43038.8	41593.1
Q63965	Q63965	SFXN1_RAT	Sfxn1	Sideroflexin-1	1	YAYDSAFHPDTGEK	YAYDSAFHPDTGEK	2	YAYDSAFHPDTGEK2	20807.2	19897.1	16424.3
Q63965	Q63965	SFXN1_RAT	Sfxn1	Sideroflexin-1	1	YAYDSAFHPDTGEK	YAYDSAFHPDTGEK	3	YAYDSAFHPDTGEK3	247348	252098	245288
A0A8I6AAX0	A0A8I6AAX0	A0A8I6AAX0_RAT	ENSRNOG00000064181	Ig-like domain-containing protein	1	YAYWYQQKPDQSIVR	YAYWYQQKPDQSIVR	2	YAYWYQQKPDQSIVR2	3316.39	3117.33	11410.6
A0A8I6AAX0	A0A8I6AAX0	A0A8I6AAX0_RAT	ENSRNOG00000064181	Ig-like domain-containing protein	1	YAYWYQQKPDQSIVR	YAYWYQQKPDQSIVR	3	YAYWYQQKPDQSIVR3	254959	222070	222857
D4AC36	D4AC36	D4AC36_RAT	Eif3f	Eukaryotic translation initiation factor 3 subunit F	1	YAYYDTER	YAYYDTER	2	YAYYDTER2	99611.3	114326	120271
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	YAYYVCYK	YAYYVC(UniMod:4)YK	2	YAYYVC(UniMod:4)YK2	12269.2	23000.5	19881.6
A0A8I6AHW7	A0A8I6AHW7	A0A8I6AHW7_RAT	Smap1	Small ArfGAP 1	1	YCADCEAK	YC(UniMod:4)ADC(UniMod:4)EAK	2	YC(UniMod:4)ADC(UniMod:4)EAK2			33111.5
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	YCADHFADGR	YC(UniMod:4)ADHFADGR	2	YC(UniMod:4)ADHFADGR2	1941.03	4210.67	2696.42
Q9R172	Q9R172	NOTC3_RAT	Notch3	Neurogenic locus notch homolog protein 3	1	YCADHFADGR	YC(UniMod:4)ADHFADGR	3	YC(UniMod:4)ADHFADGR3	66093.5	78254.9	86152.4
Q8K3L6	Q8K3L6	GIMA5_RAT	Gimap5	GTPase IMAP family member 5	1	YCAFNNK	YC(UniMod:4)AFNNK	2	YC(UniMod:4)AFNNK2	8691.36	7318.77	9027.51
A0A8I6GEV9	A0A8I6GEV9	A0A8I6GEV9_RAT	Abce1	ATP binding cassette subfamily E member 1	1	YCANAFK	YC(UniMod:4)ANAFK	2	YC(UniMod:4)ANAFK2	20883.8	23695.1	23468.4
B2RYI2	B2RYI2	B2RYI2_RAT	Srp68	Signal recognition particle subunit SRP68	1	YCAYNIGDQSAINELMQMR	YC(UniMod:4)AYNIGDQSAINELMQMR	3	YC(UniMod:4)AYNIGDQSAINELMQMR3	1915.7		
P20650	P20650	PPM1A_RAT	Ppm1a	Protein phosphatase 1A	1	YCCEHLLDHITNNQDFK	YC(UniMod:4)C(UniMod:4)EHLLDHITNNQDFK	3	YC(UniMod:4)C(UniMod:4)EHLLDHITNNQDFK3	2280.41		
O08773	O08773	RGS14_RAT	Rgs14	Regulator of G-protein signaling 14	1	YCCVYLPDGTASLALAR	YC(UniMod:4)C(UniMod:4)VYLPDGTASLALAR	2	YC(UniMod:4)C(UniMod:4)VYLPDGTASLALAR2	20622.2	17904.8	22914.8
Q6P752	Q6P752;Q5PQX1	TOIP2_RAT	Tor1aip2	Torsin-1A-interacting protein 2	0	YCDHENAAFK	YC(UniMod:4)DHENAAFK	3	YC(UniMod:4)DHENAAFK3	18601.6	18610.3	
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	YCDLLNVDISCDGCDEIAPWHR	YC(UniMod:4)DLLNVDISC(UniMod:4)DGC(UniMod:4)DEIAPWHR	3	YC(UniMod:4)DLLNVDISC(UniMod:4)DGC(UniMod:4)DEIAPWHR3	3208.96	2818.29	4574.91
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	YCDNLLK	YC(UniMod:4)DNLLK	2	YC(UniMod:4)DNLLK2		17206.3	8023.83
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	YCDPVVLTYQAER	YC(UniMod:4)DPVVLTYQAER	2	YC(UniMod:4)DPVVLTYQAER2	5297.33	7220.2	7680.82
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	YCDSLLK	YC(UniMod:4)DSLLK	2	YC(UniMod:4)DSLLK2	72538.8	73097.1	77429.3
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	YCDSLLKK	YC(UniMod:4)DSLLKK	2	YC(UniMod:4)DSLLKK2	4327.26	8836.48	5293.07
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	YCECDDFSCVR	YC(UniMod:4)EC(UniMod:4)DDFSC(UniMod:4)VR	2	YC(UniMod:4)EC(UniMod:4)DDFSC(UniMod:4)VR2	4.08214e+06	4.04615e+06	4.40421e+06
Q8R2H2	Q8R2H2	ITB3_RAT	Itgb3	Integrin beta-3	1	YCECDDFSCVR	YC(UniMod:4)EC(UniMod:4)DDFSC(UniMod:4)VR	3	YC(UniMod:4)EC(UniMod:4)DDFSC(UniMod:4)VR3	38157.6	33054.6	54515.1
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	YCEDLFGDLLLK	YC(UniMod:4)EDLFGDLLLK	2	YC(UniMod:4)EDLFGDLLLK2	6929.65	11326	8593.63
A0A8I6A6W3	A0A8I6A6W3	A0A8I6A6W3_RAT	Lims1	LIM and senescent cell antigen-like-containing domain protein	1	YCEHDFQMLFAPCCHQCGEFIIGR	YC(UniMod:4)EHDFQMLFAPC(UniMod:4)C(UniMod:4)HQC(UniMod:4)GEFIIGR	4	YC(UniMod:4)EHDFQMLFAPC(UniMod:4)C(UniMod:4)HQC(UniMod:4)GEFIIGR4	476853	513189	534182
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	YCEVLGAAATTDYNNNHEGREEDQR	YC(UniMod:4)EVLGAAATTDYNNNHEGREEDQR	3	YC(UniMod:4)EVLGAAATTDYNNNHEGREEDQR3	9218.08	5903.12	11702.2
Q6MG49	Q6MG49	BAG6_RAT	Bag6	Large proline-rich protein BAG6	1	YCEVLGAAATTDYNNNHEGREEDQR	YC(UniMod:4)EVLGAAATTDYNNNHEGREEDQR	4	YC(UniMod:4)EVLGAAATTDYNNNHEGREEDQR4	18362.8	23234.3	26674.8
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	YCFGVEDTLK	YC(UniMod:4)FGVEDTLK	2	YC(UniMod:4)FGVEDTLK2	22749.1	23534.7	29288.5
P85515	F7F067;P85515	ACTZ_RAT	Actr1a	Alpha-centractin	0	YCFPNYVGR	YC(UniMod:4)FPNYVGR	2	YC(UniMod:4)FPNYVGR2	269717	237318	227938
P85515	F7F067;P85515	ACTZ_RAT	Actr1a	Alpha-centractin	0	YCFPNYVGRPK	YC(UniMod:4)FPNYVGRPK	2	YC(UniMod:4)FPNYVGRPK2	64255.1	65354.5	71640.6
P85515	F7F067;P85515	ACTZ_RAT	Actr1a	Alpha-centractin	0	YCFPNYVGRPK	YC(UniMod:4)FPNYVGRPK	3	YC(UniMod:4)FPNYVGRPK3	358510	359073	398443
D3ZWA8	D3ZWA8	D3ZWA8_RAT	Appl1	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1	1	YCFQITSFDGK	YC(UniMod:4)FQITSFDGK	2	YC(UniMod:4)FQITSFDGK2	9887.72		6398.26
A0A0G2K8I0	A0A0G2K8I0	A0A0G2K8I0_RAT	Sh3bgrl2	SH3 domain-binding glutamic acid-rich-like protein	1	YCGDYDSFFESK	YC(UniMod:4)GDYDSFFESK	2	YC(UniMod:4)GDYDSFFESK2	23163.4	16380.1	20412.5
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	YCGLPGEYWLGNDK	YC(UniMod:4)GLPGEYWLGNDK	2	YC(UniMod:4)GLPGEYWLGNDK2	2.2686e+07	2.23056e+07	2.64814e+07
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	YCGLPGEYWLGNDK	YC(UniMod:4)GLPGEYWLGNDK	3	YC(UniMod:4)GLPGEYWLGNDK3	457718	442932	517914
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	YCGLPGEYWLGNDKISQLTR	YC(UniMod:4)GLPGEYWLGNDKISQLTR	3	YC(UniMod:4)GLPGEYWLGNDKISQLTR3	52958.9	93586.8	74454.6
Q9ES72	Q9ES72	CCN1_RAT	Ccn1	CCN family member 1	1	YCGSCVDGR	YC(UniMod:4)GSC(UniMod:4)VDGR	2	YC(UniMod:4)GSC(UniMod:4)VDGR2		50577.8	
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	YCGSGPPEEVYSAGDSVLVK	YC(UniMod:4)GSGPPEEVYSAGDSVLVK	3	YC(UniMod:4)GSGPPEEVYSAGDSVLVK3	8254.47	7420.7	7484.06
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	YCGYEKPDDIK	YC(UniMod:4)GYEKPDDIK	3	YC(UniMod:4)GYEKPDDIK3	22056.7	17970.3	29520
P35433	P35433	PUR1_RAT	Ppat	Amidophosphoribosyltransferase	1	YCHEVKPGEIVEISR	YC(UniMod:4)HEVKPGEIVEISR	4	YC(UniMod:4)HEVKPGEIVEISR4	8580.35	9561.05	7285.66
A0A8I6AI88	A0A8I6AI88	A0A8I6AI88_RAT	Chpf2	Hexosyltransferase	1	YCHGGFGYLLSR	YC(UniMod:4)HGGFGYLLSR	3	YC(UniMod:4)HGGFGYLLSR3	6275.64	2872.94	3621.47
Q02769	Q02769	FDFT_RAT	Fdft1	Squalene synthase	1	YCHYVAGLVGIGLSR	YC(UniMod:4)HYVAGLVGIGLSR	3	YC(UniMod:4)HYVAGLVGIGLSR3	1869.17	2238.57	1992.9
A0A8I6AT07	M0R4Q5;A0A8I6AT07	A0A8I6AT07_RAT	Kbtbd7	Kelch repeat and BTB domain containing 7	0	YCLDVIEGALLQLR	YC(UniMod:4)LDVIEGALLQLR	2	YC(UniMod:4)LDVIEGALLQLR2	2256.79		
Q5PPI3	Q5PPI3	GSKIP_RAT	Gskip	GSK3B-interacting protein	1	YCLELTEAGLR	YC(UniMod:4)LELTEAGLR	2	YC(UniMod:4)LELTEAGLR2	5624.37	6991.52	8494.72
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	YCLFGNNVTLANK	YC(UniMod:4)LFGNNVTLANK	2	YC(UniMod:4)LFGNNVTLANK2	131685	198127	159351
P19686	P19686	GCYA1_RAT	Gucy1a1	Guanylate cyclase soluble subunit alpha-1	1	YCLFGNNVTLANK	YC(UniMod:4)LFGNNVTLANK	3	YC(UniMod:4)LFGNNVTLANK3	4748.42	3185.59	6953.74
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	YCLFGNTVNLTSR	YC(UniMod:4)LFGNTVNLTSR	2	YC(UniMod:4)LFGNTVNLTSR2	214062	207752	192515
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	YCLFGNTVNLTSR	YC(UniMod:4)LFGNTVNLTSR	3	YC(UniMod:4)LFGNTVNLTSR3	8452.27	12272.7	7020.78
A0A8I5ZMX2	A0A8I5ZMX2	A0A8I5ZMX2_RAT	Adamts3	ADAM metallopeptidase with thrombospondin type 1, motif 3	1	YCLGERPESR	YC(UniMod:4)LGERPESR	3	YC(UniMod:4)LGERPESR3	43443.9	35581.7	36836.9
A0A8I5ZVY6	A0A8I5ZVY6	A0A8I5ZVY6_RAT	Rint1	RAD50 interactor 1	1	YCLPASPSVALPIQIMLVPLQK	YC(UniMod:4)LPASPSVALPIQIMLVPLQK	3	YC(UniMod:4)LPASPSVALPIQIMLVPLQK3			6068.38
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	YCNCNSSMPR	YC(UniMod:4)NC(UniMod:4)NSSMPR	2	YC(UniMod:4)NC(UniMod:4)NSSMPR2	6149.35	12247	6919.2
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	YCNCNSSMPRPVK	YC(UniMod:4)NC(UniMod:4)NSSMPRPVK	3	YC(UniMod:4)NC(UniMod:4)NSSMPRPVK3	8169.46	12817.9	9505.23
A0A8I5ZM79	A0A8I5ZM79	A0A8I5ZM79_RAT	Psmd7	Proteasome 26S subunit, non-ATPase 7	1	YCPNSVLVIIDVKPK	YC(UniMod:4)PNSVLVIIDVKPK	2	YC(UniMod:4)PNSVLVIIDVKPK2	5178.77	3159.49	
A0A8I5ZM79	A0A8I5ZM79	A0A8I5ZM79_RAT	Psmd7	Proteasome 26S subunit, non-ATPase 7	1	YCPNSVLVIIDVKPK	YC(UniMod:4)PNSVLVIIDVKPK	3	YC(UniMod:4)PNSVLVIIDVKPK3	25408.7	27736.1	26365.3
Q6AYG3	Q6AYG3	PRUN1_RAT	Prune1	Exopolyphosphatase PRUNE1	1	YCPPCHVSVELVGSCATLVAER	YC(UniMod:4)PPC(UniMod:4)HVSVELVGSC(UniMod:4)ATLVAER	3	YC(UniMod:4)PPC(UniMod:4)HVSVELVGSC(UniMod:4)ATLVAER3	18913.6	19317	14287.2
Q9EQT5	Q9EQT5	TINAL_RAT	Tinagl1	Tubulointerstitial nephritis antigen-like	1	YCQEQDMCCR	YC(UniMod:4)QEQDMC(UniMod:4)C(UniMod:4)R	2	YC(UniMod:4)QEQDMC(UniMod:4)C(UniMod:4)R2	3223.61	4208.92	3557.97
B1H219	B1H219	B1H219_RAT	Dkk3	Dickkopf WNT signaling pathway inhibitor 3	1	YCQFSSFK	YC(UniMod:4)QFSSFK	2	YC(UniMod:4)QFSSFK2	1.29789e+06	1.33811e+06	1.32224e+06
Q6P7D4	Q6P7D4	CP20A_RAT	Cyp20a1	Cytochrome P450 20A1	1	YCQQVLCETVR	YC(UniMod:4)QQVLC(UniMod:4)ETVR	2	YC(UniMod:4)QQVLC(UniMod:4)ETVR2	6684.67	3883.44	3520.46
A0A8I5Y120	A0A8I5Y120	A0A8I5Y120_RAT	Brap	BRCA1 associated protein	1	YCQTPEPVEENK	YC(UniMod:4)QTPEPVEENK	2	YC(UniMod:4)QTPEPVEENK2	2772.2	3727.1	6490.52
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	YCRPESQEHPEADPGSAAPYLK	YC(UniMod:4)RPESQEHPEADPGSAAPYLK	3	YC(UniMod:4)RPESQEHPEADPGSAAPYLK3	4075.14	3298.18	2996.12
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	YCRPESQEHPEADPGSAAPYLK	YC(UniMod:4)RPESQEHPEADPGSAAPYLK	4	YC(UniMod:4)RPESQEHPEADPGSAAPYLK4	60535.2	55698.6	48316.3
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	YCSSDQVEIFSSLLQR	YC(UniMod:4)SSDQVEIFSSLLQR	3	YC(UniMod:4)SSDQVEIFSSLLQR3			2271.66
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	YCSSQIDAEMR	YC(UniMod:4)SSQIDAEMR	2	YC(UniMod:4)SSQIDAEMR2	1.31622e+06	845198	836667
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	YCSSQIDAEMR	YC(UniMod:4)SSQIDAEMR	3	YC(UniMod:4)SSQIDAEMR3	7628.27	9387.98	
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	YCSSQIDAEMRDILQS	YC(UniMod:4)SSQIDAEMRDILQS	2	YC(UniMod:4)SSQIDAEMRDILQS2	19750.1	21727.4	24134.4
P04276	P04276	VTDB_RAT	Gc	Vitamin D-binding protein	1	YCSSQIDAEMRDILQS	YC(UniMod:4)SSQIDAEMRDILQS	3	YC(UniMod:4)SSQIDAEMRDILQS3	24130.8	21980.1	14193.9
G3V6K6	G3V6K6	G3V6K6_RAT	Egfr	Receptor protein-tyrosine kinase	1	YCTAISGDLHILPVAFK	YC(UniMod:4)TAISGDLHILPVAFK	3	YC(UniMod:4)TAISGDLHILPVAFK3	7269.01	6014.65	6197.81
D3ZGJ0	D3ZGJ0	D3ZGJ0_RAT	Dhx32	DEAH-box helicase 32 (putative)	1	YCTDDMLQR	YC(UniMod:4)TDDMLQR	2	YC(UniMod:4)TDDMLQR2	4934.4	11397.9	8984.36
Q62651	Q62651	ECH1_RAT	Ech1	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial	1	YCTQDAFFQVK	YC(UniMod:4)TQDAFFQVK	2	YC(UniMod:4)TQDAFFQVK2	18362.8	19495.9	16366.1
Q64566	Q64566	AT2C1_RAT	Atp2c1	Calcium-transporting ATPase type 2C member 1	1	YCTTYNSK	YC(UniMod:4)TTYNSK	2	YC(UniMod:4)TTYNSK2		36255.1	
P57113	P57113	MAAI_RAT	Gstz1	Maleylacetoacetate isomerase	1	YCVGDEVSMADVCLAPQVANAER	YC(UniMod:4)VGDEVSMADVC(UniMod:4)LAPQVANAER	3	YC(UniMod:4)VGDEVSMADVC(UniMod:4)LAPQVANAER3	4481.8	1917.43	2220.35
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	YCVSQEK	YC(UniMod:4)VSQEK	2	YC(UniMod:4)VSQEK2	14933.1	10429.3	7911.91
Q3B7U9	Q3B7U9	FKBP8_RAT	Fkbp8	Peptidyl-prolyl cis-trans isomerase FKBP8	1	YCYGPQGSR	YC(UniMod:4)YGPQGSR	2	YC(UniMod:4)YGPQGSR2	34961	32874.1	45046.1
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	YCYPFTIYK	YC(UniMod:4)YPFTIYK	2	YC(UniMod:4)YPFTIYK2	11580.6	14727.6	17256.7
Q498D5	Q498D5	RMD2_RAT	Rmdn2	Regulator of microtubule dynamics protein 2	1	YCYTVSK	YC(UniMod:4)YTVSK	2	YC(UniMod:4)YTVSK2	7411.49	11309.6	4690.92
Q9WU61	Q9WU61	CLCC1_RAT	Clcc1	Chloride channel CLIC-like protein 1	1	YDAEILLTR	YDAEILLTR	2	YDAEILLTR2	7142.26	1267.35	4118.97
P62907	A0A8I6A8X9;P62907;A0A8I5ZRE5	RL10A_RAT	Rpl10a	Large ribosomal subunit protein uL1	0	YDAFLASESLIK	YDAFLASESLIK	2	YDAFLASESLIK2	30258.5	16814.8	24176
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	YDAGEHGLQEAEK	YDAGEHGLQEAEK	2	YDAGEHGLQEAEK2	5454.59	3763.32	1393.03
Q4VSI4	Q4VSI4	UBP7_RAT	Usp7	Ubiquitin carboxyl-terminal hydrolase 7	1	YDAGEHGLQEAEK	YDAGEHGLQEAEK	3	YDAGEHGLQEAEK3	90530.7	104647	59728.2
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	YDAIFDSLSPVDGFLSGDK	YDAIFDSLSPVDGFLSGDK	3	YDAIFDSLSPVDGFLSGDK3	5643.76	11430.9	6733.88
O08628	O08628	PCOC1_RAT	Pcolce	Procollagen C-endopeptidase enhancer 1	1	YDALEVFAGSGTSGQR	YDALEVFAGSGTSGQR	2	YDALEVFAGSGTSGQR2	13476.3	11494.5	13348.5
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	YDALVLTNNGR	YDALVLTNNGR	2	YDALVLTNNGR2	1.68367e+06	2.01889e+06	1.92693e+06
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	YDALVLTNNGR	YDALVLTNNGR	3	YDALVLTNNGR3	5249.5	4829.43	6447.97
D4A416	D4A416	D4A416_RAT	Clptm1l	CLPTM1-like	1	YDAQAMK	YDAQAMK	2	YDAQAMK2	7684.27	11078.2	12010
F1LM47	F1LM47	F1LM47_RAT	Sucla2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	1	YDATMVEINPMVEDADGK	YDATMVEINPMVEDADGK	3	YDATMVEINPMVEDADGK3	4034.96	6839.28	6581.27
Q3T1J1	Q3T1J1	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	1	YDCGEEILITVLSAMTEEAAVAIK	YDC(UniMod:4)GEEILITVLSAMTEEAAVAIK	3	YDC(UniMod:4)GEEILITVLSAMTEEAAVAIK3	5571.83	26812.9	35804.5
Q812E8	Q812E8	NADE_RAT	Nadsyn1	Glutamine-dependent NAD(+) synthetase	1	YDCSSADINPIGGISK	YDC(UniMod:4)SSADINPIGGISK	2	YDC(UniMod:4)SSADINPIGGISK2		2725.33	1866.07
B0BNG0	B0BNG0	EMC2_RAT	Emc2	ER membrane protein complex subunit 2	1	YDDAIQLYDR	YDDAIQLYDR	2	YDDAIQLYDR2	35352.1	33839.6	37335.5
Q641Y5	Q641Y5	ATG7_RAT	Atg7	Ubiquitin-like modifier-activating enzyme ATG7	1	YDDDTVLVSLLK	YDDDTVLVSLLK	2	YDDDTVLVSLLK2	40305.2	39188.9	31289.2
A0A8I5ZQ24	A0A8I5ZQ24	A0A8I5ZQ24_RAT	Atp6v1h	V-type proton ATPase subunit H	1	YDDEDISEDIK	YDDEDISEDIK	2	YDDEDISEDIK2	11500.8	12054.5	7014.53
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	YDDEECTLPIAGR	YDDEEC(UniMod:4)TLPIAGR	2	YDDEEC(UniMod:4)TLPIAGR2	846.677	5739.07	2669.45
D3ZG43	D3ZG43	D3ZG43_RAT	Ndufs3	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial	1	YDDEVKR	YDDEVKR	2	YDDEVKR2			12813.2
A0JPJ7	A0JPJ7	OLA1_RAT	Ola1	Obg-like ATPase 1	1	YDDFKDEGSENAVK	YDDFKDEGSENAVK	3	YDDFKDEGSENAVK3	14777.4	15845.1	9068.55
Q9ESM0	Q9ESM0	IP6K1_RAT	Ip6k1	Inositol hexakisphosphate kinase 1	1	YDDHTVCKPLISR	YDDHTVC(UniMod:4)KPLISR	3	YDDHTVC(UniMod:4)KPLISR3	4158.97	3743.68	1890.73
Q9ESM0	Q9ESM0	IP6K1_RAT	Ip6k1	Inositol hexakisphosphate kinase 1	1	YDDHTVCKPLISR	YDDHTVC(UniMod:4)KPLISR	4	YDDHTVC(UniMod:4)KPLISR4	8308.26	7010.52	6834.44
B5DEH0	B5DEH0	LIMD1_RAT	Limd1	LIM domain-containing protein 1	1	YDDLGLEASK	YDDLGLEASK	2	YDDLGLEASK2	10019.7	10572.7	17076.2
P61983	P35213;P61983	1433G_RAT	Ywhag	14-3-3 protein gamma	0	YDDMAAAMK	YDDMAAAMK	2	YDDMAAAMK2	3.07918e+06	3.46049e+06	3.80233e+06
P63102	P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	1	YDDMAACMK	YDDMAAC(UniMod:4)MK	2	YDDMAAC(UniMod:4)MK2	8.89953e+06	8.93305e+06	9.55755e+06
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	YDDMASAMK	YDDMASAMK	2	YDDMASAMK2	3.75416e+06	4.09874e+06	4.57425e+06
P68255	P68255	1433T_RAT	Ywhaq	14-3-3 protein theta	1	YDDMATCMK	YDDMATC(UniMod:4)MK	2	YDDMATC(UniMod:4)MK2	819766	996817	1.00577e+06
P48721	P48721	GRP75_RAT	Hspa9	Stress-70 protein, mitochondrial	1	YDDPEVQK	YDDPEVQK	2	YDDPEVQK2	66290.1	59146.1	71698.7
A0A8I6GEV9	A0A8I6GEV9	A0A8I6GEV9_RAT	Abce1	ATP binding cassette subfamily E member 1	1	YDDPPDWQEILTYFR	YDDPPDWQEILTYFR	2	YDDPPDWQEILTYFR2			5470.71
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	YDDVEEANYFQQASELAK	YDDVEEANYFQQASELAK	3	YDDVEEANYFQQASELAK3	8285.15	4893.68	4234.32
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	YDDVTEK	YDDVTEK	1	YDDVTEK1	26593.2	28592.4	22368.3
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	YDDVTEK	YDDVTEK	2	YDDVTEK2	557216	571866	647933
P04897	P04897	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	1	YDEAASYIQSK	YDEAASYIQSK	2	YDEAASYIQSK2	966765	973884	1.12968e+06
P04897	P04897	GNAI2_RAT	Gnai2	Guanine nucleotide-binding protein G(i) subunit alpha-2	1	YDEAASYIQSK	YDEAASYIQSK	3	YDEAASYIQSK3	5472.76		3286.63
A0A8I6GGN2	A0A8I6GGN2	A0A8I6GGN2_RAT	Itga2b	Integrin subunit alpha 2b	1	YDEAEKTPVGGCFVAELQSGGR	YDEAEKTPVGGC(UniMod:4)FVAELQSGGR	3	YDEAEKTPVGGC(UniMod:4)FVAELQSGGR3	2.74833e+06	3.18726e+06	3.25357e+06
Q68FQ7	Q68FQ7	RPAP3_RAT	Rpap3	RNA polymerase II-associated protein 3	1	YDEAIECYTK	YDEAIEC(UniMod:4)YTK	2	YDEAIEC(UniMod:4)YTK2		3750.92	11093.5
D3ZV40	D3ZV40	D3ZV40_RAT	Unk	Unk zinc finger	1	YDEATGLCPEGDECPFLHR	YDEATGLC(UniMod:4)PEGDEC(UniMod:4)PFLHR	3	YDEATGLC(UniMod:4)PEGDEC(UniMod:4)PFLHR3	2277.55		1176.13
F1LX68	F1LX68	F1LX68_RAT	Spats2	Spermatogenesis associated, serine-rich 2	1	YDEDLGR	YDEDLGR	2	YDEDLGR2	36348.7	36120.6	51079.5
Q5XIW8	Q5XIW8	SNUT1_RAT	Sart1	U4/U6.U5 tri-snRNP-associated protein 1	1	YDEELEGERPHSFR	YDEELEGERPHSFR	3	YDEELEGERPHSFR3	3483.06		5689.9
Q5XIW8	Q5XIW8	SNUT1_RAT	Sart1	U4/U6.U5 tri-snRNP-associated protein 1	1	YDEELEGERPHSFR	YDEELEGERPHSFR	4	YDEELEGERPHSFR4	31528.2	7575.08	
F1MAA1	F1MAA1	F1MAA1_RAT	Usp47	Ubiquitin carboxyl-terminal hydrolase 47	1	YDEFHDYLER	YDEFHDYLER	3	YDEFHDYLER3	53796.6	59443.6	70746.7
A0A8I5YC99	A0A8I5YC99	A0A8I5YC99_RAT	Eps15	Epidermal growth factor receptor pathway substrate 15	1	YDEIFLK	YDEIFLK	2	YDEIFLK2	120501	117383	123636
Q8R431	Q8R431	MGLL_RAT	Mgll	Monoglyceride lipase	1	YDELAQMLK	YDELAQMLK	2	YDELAQMLK2	56698.7	47778.2	54916.3
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	YDELNVDLK	YDELNVDLK	2	YDELNVDLK2	5651.63	7765.72	6523.88
D3ZLD5	D3ZLD5;A0A0G2K5A4	D3ZLD5_RAT	Golga3	Golgin A3	0	YDELQAR	YDELQAR	2	YDELQAR2	2.01648e+06	1.82085e+06	1.72788e+06
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	YDELQNSSGR	YDELQNSSGR	2	YDELQNSSGR2	15112.8	15002.5	6608.14
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	YDELYSSLTALLAAGSQLDTVK	YDELYSSLTALLAAGSQLDTVK	3	YDELYSSLTALLAAGSQLDTVK3		5419.51	5669.83
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	YDEMVESMK	YDEMVESMK	2	YDEMVESMK2	1.44444e+06	1.3892e+06	1.36496e+06
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	YDEMVESMKK	YDEMVESMKK	2	YDEMVESMKK2	85380.7	67233.9	66093.4
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	YDEMVESMKK	YDEMVESMKK	3	YDEMVESMKK3	444933	545654	560019
Q1RP74	Q1RP74	Q1RP74_RAT	Tbcb	Tubulin folding cofactor B	1	YDEPLGK	YDEPLGK	2	YDEPLGK2	289693	247763	263711
A0A8I6G5W4	A0A8I6G5W4	A0A8I6G5W4_RAT	Snrnp70	U1 small nuclear ribonucleoprotein 70 kDa	1	YDERPGPSPLPHR	YDERPGPSPLPHR	3	YDERPGPSPLPHR3	18982.4	4899.77	
A0A8I6G5W4	A0A8I6G5W4	A0A8I6G5W4_RAT	Snrnp70	U1 small nuclear ribonucleoprotein 70 kDa	1	YDERPGPSPLPHR	YDERPGPSPLPHR	4	YDERPGPSPLPHR4	16445.3		6522.14
O35094	O35094	TIM44_RAT	Timm44	Mitochondrial import inner membrane translocase subunit TIM44	1	YDESDNVLIR	YDESDNVLIR	2	YDESDNVLIR2	9718.29	7858.06	19595.1
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	YDEVLHMVR	YDEVLHMVR	2	YDEVLHMVR2	36140.8	45495.2	29498.4
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	YDEVLHMVR	YDEVLHMVR	3	YDEVLHMVR3	381724	429996	395194
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	YDEYVNVK	YDEYVNVK	2	YDEYVNVK2	60227.1	57356.6	57667
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	YDFEPYVSTNAWSPIMR	YDFEPYVSTNAWSPIMR	3	YDFEPYVSTNAWSPIMR3	35818.8	16141.1	36619.9
A0A8I6ADR8	A0A8I6ADR8	A0A8I6ADR8_RAT	Efr3a	EFR3 homolog A	1	YDFFVSR	YDFFVSR	2	YDFFVSR2	26024.5	24880.4	19154.3
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	YDFIEIR	YDFIEIR	2	YDFIEIR2	176059	183521	165967
A8WCF8	A8WCF8	TPRGL_RAT	Tprg1l	Tumor protein p63-regulated gene 1-like protein	1	YDFISLQCQQVVR	YDFISLQC(UniMod:4)QQVVR	2	YDFISLQC(UniMod:4)QQVVR2	19407.5	26316.4	17150.5
D3Z9Y3	D3Z9Y3	D3Z9Y3_RAT	Cerk	Ceramide kinase	1	YDFSGLK	YDFSGLK	2	YDFSGLK2	11952.3	18423.5	14832
Q9EQX6	Q9EQX6	PDGFC_RAT	Pdgfc	Platelet-derived growth factor C	1	YDFVEVEEPSDGSVLGR	YDFVEVEEPSDGSVLGR	2	YDFVEVEEPSDGSVLGR2	34793.2	30568.8	35513.9
Q9EQX6	Q9EQX6	PDGFC_RAT	Pdgfc	Platelet-derived growth factor C	1	YDFVEVEEPSDGSVLGR	YDFVEVEEPSDGSVLGR	3	YDFVEVEEPSDGSVLGR3	1807.71		1346.17
F1M798	F1M280;F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	0	YDFVEVR	YDFVEVR	2	YDFVEVR2	61125.1	62193.8	57965.3
A0A8I5ZVT2	A0A8I5ZVT2	A0A8I5ZVT2_RAT	Fndc3a	Fibronectin type III domain containing 3a	1	YDGEDLAYTVK	YDGEDLAYTVK	2	YDGEDLAYTVK2	4678.54		7685.62
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	YDGGLDSGFHSVDSGSK	YDGGLDSGFHSVDSGSK	3	YDGGLDSGFHSVDSGSK3	20905.1	11712.7	13248
Q80Z29	Q80Z29	NAMPT_RAT	Nampt	Nicotinamide phosphoribosyltransferase	1	YDGHLPIEVK	YDGHLPIEVK	3	YDGHLPIEVK3	12212.7	15922.8	15501.8
P62914	P62914	RL11_RAT	Rpl11	Large ribosomal subunit protein uL5	1	YDGIILPGK	YDGIILPGK	2	YDGIILPGK2	29572.8	26983.5	38245.4
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	YDGLFLSNGPGDPASYPGVVSTLNR	YDGLFLSNGPGDPASYPGVVSTLNR	3	YDGLFLSNGPGDPASYPGVVSTLNR3	7333.79	14903.8	9343.95
A0A8J8YFS5	A0A8J8YFS5	A0A8J8YFS5_RAT	Hars1	Histidine--tRNA ligase, cytoplasmic	1	YDGLVGMFDPK	YDGLVGMFDPK	2	YDGLVGMFDPK2	13125.2	8232.75	10901.9
A0A0G2K735	A0A0G2K735	A0A0G2K735_RAT	Uba7	E1 ubiquitin-activating enzyme	1	YDGQIAVFGTGFQEK	YDGQIAVFGTGFQEK	2	YDGQIAVFGTGFQEK2	16213.9	19167.2	19337.8
Q5U300	Q5U300;A0A8I5ZVX0;A0A8I6A544	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	0	YDGQVAVFGSDLQEK	YDGQVAVFGSDLQEK	2	YDGQVAVFGSDLQEK2	90462.3	80958.4	72007.3
Q5U300	Q5U300;A0A8I5ZVX0;A0A8I6A544	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	0	YDGQVAVFGSDLQEK	YDGQVAVFGSDLQEK	3	YDGQVAVFGSDLQEK3	13744.5	14769.7	18998
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	YDGQVCGGLK	YDGQVC(UniMod:4)GGLK	2	YDGQVC(UniMod:4)GGLK2	107290	97949.7	82542.7
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	YDGQVCGGLKR	YDGQVC(UniMod:4)GGLKR	2	YDGQVC(UniMod:4)GGLKR2		2587.86	
B2RYB8	B2RYB8	B2RYB8_RAT	Itgb2	Integrin beta	1	YDGQVCGGLKR	YDGQVC(UniMod:4)GGLKR	3	YDGQVC(UniMod:4)GGLKR3	8477.65	21673.6	22826.1
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	YDGSGHMEVLR	YDGSGHMEVLR	2	YDGSGHMEVLR2	16941.6	29201	19122
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	YDGSGHMEVLR	YDGSGHMEVLR	3	YDGSGHMEVLR3	488282	701333	537051
A0A8I6AEI3	A0A8I6AEI3	A0A8I6AEI3_RAT	Wwox	WW domain-containing oxidoreductase	1	YDGSTTAMEILQGR	YDGSTTAMEILQGR	2	YDGSTTAMEILQGR2		2706.12	2087.44
A0A8I6A583	A0A8I6A583	A0A8I6A583_RAT	ENSRNOG00000064207	Ig-like domain-containing protein	1	YDGSYTNYAPSLK	YDGSYTNYAPSLK	2	YDGSYTNYAPSLK2	140347	136610	144471
Q05511	Q05511	HEPS_RAT	Hpn	Serine protease hepsin	1	YDGTHLCGGSLLSGDWVLTAAHCFPER	YDGTHLC(UniMod:4)GGSLLSGDWVLTAAHC(UniMod:4)FPER	4	YDGTHLC(UniMod:4)GGSLLSGDWVLTAAHC(UniMod:4)FPER4	9610.83	8936.85	9448.32
D4A4X6	D4A4X6	D4A4X6_RAT	Adamtsl2	ADAMTS-like 2	1	YDGVEVDDSYCDALTRPEPVHEFCAGR	YDGVEVDDSYC(UniMod:4)DALTRPEPVHEFC(UniMod:4)AGR	4	YDGVEVDDSYC(UniMod:4)DALTRPEPVHEFC(UniMod:4)AGR4	133174	152236	127554
P70580	P70580	PGRC1_RAT	Pgrmc1	Membrane-associated progesterone receptor component 1	1	YDGVQDPR	YDGVQDPR	2	YDGVQDPR2	55651.5	47207.1	41654.8
Q66HF1	Q66HF1	NDUS1_RAT	Ndufs1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	1	YDHLGDSPK	YDHLGDSPK	2	YDHLGDSPK2	11922.7	10633.6	11527.5
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	YDIAGHSGDGYNIK	YDIAGHSGDGYNIK	3	YDIAGHSGDGYNIK3	10073.3	23629.8	4856.41
A0A8I6AL00	A0A8I6AL00	A0A8I6AL00_RAT	Ndufs8	NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial	1	YDIDMTK	YDIDMTK	2	YDIDMTK2	110260	95525.6	105415
Q05695	Q05695	L1CAM_RAT	L1cam	Neural cell adhesion molecule L1	1	YDIEFEDKEMAPEK	YDIEFEDKEMAPEK	3	YDIEFEDKEMAPEK3	14835.8	11729.8	18076.9
Q3B7T6	Q3B7T6	CNEP1_RAT	Ctdnep1	CTD nuclear envelope phosphatase 1	1	YDILPLSPLSR	YDILPLSPLSR	2	YDILPLSPLSR2	13467.7	14815.1	17150.7
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	YDKDDDGPSDGNQFPPIAAQDLSFVIK	YDKDDDGPSDGNQFPPIAAQDLSFVIK	4	YDKDDDGPSDGNQFPPIAAQDLSFVIK4	7975.78	7138.75	6069.84
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	YDKETGENDVSLLELEK	YDKETGENDVSLLELEK	3	YDKETGENDVSLLELEK3	163617	140184	175596
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	YDKNQDVHTISLPFFQSLPDYLER	YDKNQDVHTISLPFFQSLPDYLER	4	YDKNQDVHTISLPFFQSLPDYLER4	4319.21	7486.05	8561
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	YDLDACDIQEK	YDLDAC(UniMod:4)DIQEK	2	YDLDAC(UniMod:4)DIQEK2	17472.7	15282	18076.4
P04764	M0R5J4;P04764	ENOA_RAT	Eno1	Alpha-enolase	0	YDLDFKSPDDASR	YDLDFKSPDDASR	2	YDLDFKSPDDASR2	13696	8896.71	7881.07
P04764	M0R5J4;P04764	ENOA_RAT	Eno1	Alpha-enolase	0	YDLDFKSPDDASR	YDLDFKSPDDASR	3	YDLDFKSPDDASR3	73197.6	99021.1	129973
D3ZG57	D3ZG57	D3ZG57_RAT	Tor4a	Torsin family 4, member A	1	YDLDGLEK	YDLDGLEK	2	YDLDGLEK2	20424.9	26325.1	24976.3
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	YDLEECTCASSDGK	YDLEEC(UniMod:4)TC(UniMod:4)ASSDGK	2	YDLEEC(UniMod:4)TC(UniMod:4)ASSDGK2	22942.5	34386.7	21131.3
O35783	O35783	CALU_RAT	Calu	Calumenin	1	YDLFVGSQATDFGEALVR	YDLFVGSQATDFGEALVR	3	YDLFVGSQATDFGEALVR3	39191.6	49256.9	55960.7
O35783	O35783	CALU_RAT	Calu	Calumenin	1	YDLFVGSQATDFGEALVRHDEF	YDLFVGSQATDFGEALVRHDEF	3	YDLFVGSQATDFGEALVRHDEF3	38979	17979.8	22842.2
Q68FT7	Q68FT7	Q68FT7_RAT	Farsb	Phenylalanine--tRNA ligase beta subunit	1	YDLLCLEGLAR	YDLLC(UniMod:4)LEGLAR	2	YDLLC(UniMod:4)LEGLAR2	18976.8	25997	16578.6
D3ZZL3	D3ZZL3	D3ZZL3_RAT	Naglu	N-acetyl-alpha-glucosaminidase	1	YDLLDVTR	YDLLDVTR	2	YDLLDVTR2	28809.1	23391.7	21121.7
D4A7V9	D4A7V9	E2AK4_RAT	Eif2ak4	eIF-2-alpha kinase GCN2	1	YDLLIPK	YDLLIPK	2	YDLLIPK2	4489.45	3479.33	3758.87
Q811M5	Q811M5	CO6_RAT	C6	Complement component C6	1	YDLLYQFSR	YDLLYQFSR	2	YDLLYQFSR2	125903	124836	142719
Q4G064	Q4G064	COQ5_RAT	Coq5	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial	1	YDLMNDMMSLGIHR	YDLMNDMMSLGIHR	3	YDLMNDMMSLGIHR3	2737.93		3024.83
Q64165	Q64165	Q64165_RAT	Gcnt1	Glucosaminyl (N-acetyl) transferase 1	1	YDLSDMNAVAR	YDLSDMNAVAR	2	YDLSDMNAVAR2	19646	21353.4	23511.4
P84850	P84850	D2HDH_RAT	D2hgdh	D-2-hydroxyglutarate dehydrogenase, mitochondrial	1	YDLSLPVER	YDLSLPVER	2	YDLSLPVER2		2599.1	6845.41
F1LU48	F1LU48	F1LU48_RAT	Ergic1	Endoplasmic reticulum-Golgi intermediate compartment protein	1	YDLSPITVK	YDLSPITVK	2	YDLSPITVK2	36341.6	43663	42427.2
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	YDLSVLAR	YDLSVLAR	2	YDLSVLAR2	9917.87	5331.28	6233.34
A0A8J8YFS5	F1M9C9;A0A8J8YFS5	A0A8J8YFS5_RAT	Hars1	Histidine--tRNA ligase, cytoplasmic	0	YDLTVPFAR	YDLTVPFAR	2	YDLTVPFAR2	46278.8	45540	51045
Q5RKL5	Q5RKL5	STEA3_RAT	Steap3	Metalloreductase STEAP3	1	YDLVNLAVK	YDLVNLAVK	2	YDLVNLAVK2	2868.98		2364.93
Q5BJL5	Q5BJL5	SBNO1_RAT	Sbno1	Protein strawberry notch homolog 1	1	YDMGILDLGSGDEK	YDMGILDLGSGDEK	2	YDMGILDLGSGDEK2		2564.68	
B0BNI5	B0BNI5	OLFL3_RAT	Olfml3	Olfactomedin-like protein 3	1	YDMVTDCSYTISQVR	YDMVTDC(UniMod:4)SYTISQVR	2	YDMVTDC(UniMod:4)SYTISQVR2	15574.9	10857.7	10700.9
B0BNI5	B0BNI5	OLFL3_RAT	Olfml3	Olfactomedin-like protein 3	1	YDMVTDCSYTISQVR	YDMVTDC(UniMod:4)SYTISQVR	3	YDMVTDC(UniMod:4)SYTISQVR3	6005.28	14885	5310.56
B5DEN9	B5DEN9	VPS28_RAT	Vps28	Vacuolar protein sorting-associated protein 28 homolog	1	YDNMAELFAVVK	YDNMAELFAVVK	2	YDNMAELFAVVK2	19337.8	20325	24335.3
Q5PPK9	Q5PPK9	EIPR1_RAT	Eipr1	EARP and GARP complex-interacting protein 1	1	YDNQIHIIDFDDENNIINK	YDNQIHIIDFDDENNIINK	3	YDNQIHIIDFDDENNIINK3	5130.45	2819.67	6407.24
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	YDPLQDNTGEVVAVK	YDPLQDNTGEVVAVK	2	YDPLQDNTGEVVAVK2	60997.8	49860.1	62750.3
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	YDPLQDNTGEVVAVK	YDPLQDNTGEVVAVK	3	YDPLQDNTGEVVAVK3	4934.8	4248.27	
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	YDPLQDNTGEVVAVKK	YDPLQDNTGEVVAVKK	3	YDPLQDNTGEVVAVKK3	33249.3		32563.4
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	YDPMPPESQR	YDPMPPESQR	2	YDPMPPESQR2	84895.7	82281	110601
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	YDPNVYSIK	YDPNVYSIK	2	YDPNVYSIK2	589651	643305	814341
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	YDPPLEDGAMPSAR	YDPPLEDGAMPSAR	2	YDPPLEDGAMPSAR2	164241	121200	154701
Q5XI32	Q5XI32	CAPZB_RAT	Capzb	F-actin-capping protein subunit beta	1	YDPPLEDGAMPSAR	YDPPLEDGAMPSAR	3	YDPPLEDGAMPSAR3	63284.1	70743.1	78001.7
D3ZRX9	D3ZRX9	D3ZRX9_RAT	Cnn2	Calponin	1	YDPQKEAELR	YDPQKEAELR	2	YDPQKEAELR2	33712.3	41726.8	49177.2
D3ZRX9	D3ZRX9	D3ZRX9_RAT	Cnn2	Calponin	1	YDPQKEAELR	YDPQKEAELR	3	YDPQKEAELR3	154449	174532	209365
P61227	P61227;A0A0G2JTW1;D3ZK56	RAP2B_RAT	Rap2b	Ras-related protein Rap-2b	0	YDPTIEDFYR	YDPTIEDFYR	2	YDPTIEDFYR2	266162	271642	298870
P61227	P61227;A0A0G2JTW1;D3ZK56	RAP2B_RAT	Rap2b	Ras-related protein Rap-2b	0	YDPTIEDFYRK	YDPTIEDFYRK	2	YDPTIEDFYRK2	39961.9	54029.7	63775.8
P61227	P61227;A0A0G2JTW1;D3ZK56	RAP2B_RAT	Rap2b	Ras-related protein Rap-2b	0	YDPTIEDFYRK	YDPTIEDFYRK	3	YDPTIEDFYRK3	203778	245072	206480
Q62636	Q62636;P62836	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	0	YDPTIEDSYR	YDPTIEDSYR	2	YDPTIEDSYR2	4.71141e+06	4.10795e+06	4.38395e+06
Q62636	Q62636;P62836	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	0	YDPTIEDSYRK	YDPTIEDSYRK	2	YDPTIEDSYRK2	464907	415178	360957
Q62636	Q62636;P62836	RAP1B_RAT	Rap1b	Ras-related protein Rap-1b	0	YDPTIEDSYRK	YDPTIEDSYRK	3	YDPTIEDSYRK3	4.74811e+06	5.16631e+06	5.49455e+06
G3V852	G3V852	G3V852_RAT	Tln1	Talin 1	1	YDQATDTILTVTENIFSSMGDAGEMVR	YDQATDTILTVTENIFSSMGDAGEMVR	4	YDQATDTILTVTENIFSSMGDAGEMVR4		10561.8	
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	YDQNYDIR	YDQNYDIR	2	YDQNYDIR2	120386	132360	115028
D3ZIF5	D3ZIF5	D3ZIF5_RAT	Ap3b1	AP-3 complex subunit beta	1	YDQNYDIRDR	YDQNYDIRDR	3	YDQNYDIRDR3	5758.27	24155.9	13187.4
A4V8B4	A4V8B4	SAV1_RAT	Sav1	Protein salvador homolog 1	1	YDQPPPITYQPQQTER	YDQPPPITYQPQQTER	3	YDQPPPITYQPQQTER3	17164.8	22385	22246.8
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	YDQVCEEK	YDQVC(UniMod:4)EEK	2	YDQVC(UniMod:4)EEK2		36704.8	
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	YDQWWECK	YDQWWEC(UniMod:4)K	2	YDQWWEC(UniMod:4)K2	10604.9	13658.2	11561.4
Q9QWJ9	Q9QWJ9	NRP1_RAT	Nrp1	Neuropilin-1	1	YDRLEIWDGFPEVGPHIGR	YDRLEIWDGFPEVGPHIGR	4	YDRLEIWDGFPEVGPHIGR4	26684.7	23044.7	30710.7
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	YDRVDIIETSVKPSILEAQK	YDRVDIIETSVKPSILEAQK	4	YDRVDIIETSVKPSILEAQK4	24575.3	27319.1	23111.5
Q9QXQ7	Q9QXQ7;B1WBR9	WNT5A_RAT	Wnt5a	Protein Wnt-5a	0	YDSAAAMR	YDSAAAMR	2	YDSAAAMR2	3438.28	4719.17	6896.36
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	YDSAVDCLHQPK	YDSAVDC(UniMod:4)LHQPK	2	YDSAVDC(UniMod:4)LHQPK2		3250.52	
A0A8I6AH37	A0A8I6AH37	A0A8I6AH37_RAT	Parp10	Poly [ADP-ribose] polymerase	1	YDSAVDCLHQPK	YDSAVDC(UniMod:4)LHQPK	3	YDSAVDC(UniMod:4)LHQPK3	6396.05	12455.1	14895.9
P15978	E9PTZ7;P15978	HA11_RAT	RT1-Aw2	Class I histocompatibility antigen, Non-RT1.A alpha-1 chain	0	YDSDAENPR	YDSDAENPR	2	YDSDAENPR2	301944		209070
P15978	P15978	HA11_RAT	RT1-Aw2	Class I histocompatibility antigen, Non-RT1.A alpha-1 chain	1	YDSDAENPRYEPR	YDSDAENPRYEPR	3	YDSDAENPRYEPR3	26021.7	27996.3	25486.1
F1LQF2	F1LQF2	F1LQF2_RAT	RT1-S3	RT1 class Ib, locus S3	1	YDSDVENPR	YDSDVENPR	2	YDSDVENPR2	7009.49	4748.24	4163.25
P29826	P29826	HB2B_RAT	RT1-Bb	Rano class II histocompatibility antigen, B-1 beta chain	1	YDSDVGEYR	YDSDVGEYR	2	YDSDVGEYR2	5750.26	11858	8320.94
Q01460	Q01460	DIAC_RAT	Ctbs	Di-N-acetylchitobiase	1	YDSELMCYAHSK	YDSELMC(UniMod:4)YAHSK	3	YDSELMC(UniMod:4)YAHSK3	1600.34	2834.96	2607.2
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	YDSLLGR	YDSLLGR	2	YDSLLGR2	34134.7	28874.3	33890.7
Q5XIG4	Q5XIG4	OCAD1_RAT	Ociad1	OCIA domain-containing protein 1	1	YDSNVSGQSSFGTSPAADNIEKETLPR	YDSNVSGQSSFGTSPAADNIEKETLPR	3	YDSNVSGQSSFGTSPAADNIEKETLPR3	5086.89		2427.88
Q925G0	Q925G0	RBM3_RAT	Rbm3	RNA-binding protein 3	1	YDSRPGGYGYGYGR	YDSRPGGYGYGYGR	3	YDSRPGGYGYGYGR3	7115.63	17828.3	11523.2
Q10728	Q10728	MYPT1_RAT	Ppp1r12a	Protein phosphatase 1 regulatory subunit 12A	1	YDSSSTSSSDRYDSLLGR	YDSSSTSSSDRYDSLLGR	3	YDSSSTSSSDRYDSLLGR3	143223	170093	166707
P51635	P51635	AK1A1_RAT	Akr1a1	Aldo-keto reductase family 1 member A1	1	YDSTHYK	YDSTHYK	1	YDSTHYK1			1306.46
P51635	P51635	AK1A1_RAT	Akr1a1	Aldo-keto reductase family 1 member A1	1	YDSTHYK	YDSTHYK	2	YDSTHYK2			7956.15
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	YDTDFYVLDK	YDTDFYVLDK	2	YDTDFYVLDK2	9530.61	9610.13	10715.5
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	YDTDFYVLDKYPLAVR	YDTDFYVLDKYPLAVR	3	YDTDFYVLDKYPLAVR3	14078.6	10742.5	10792.8
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	YDTDFYVLDKYPLAVRPFYTMPDPR	YDTDFYVLDKYPLAVRPFYTMPDPR	4	YDTDFYVLDKYPLAVRPFYTMPDPR4		3920.24	8483.19
A0A8I6G604	A0A8I6G604	A0A8I6G604_RAT	Lman2l	Lectin, mannose-binding 2-like	1	YDTFLVIR	YDTFLVIR	2	YDTFLVIR2	22390.4	18504.1	22143
D4A2N2	D4A2N2	D4A2N2_RAT	Inpp5b	phosphoinositide 5-phosphatase	1	YDTGSDNWDTSEK	YDTGSDNWDTSEK	2	YDTGSDNWDTSEK2	1308.34	4006.68	2417.12
F7F8A8	F7F8A8	F7F8A8_RAT	Ssr2	Translocon-associated protein subunit beta	1	YDTPKPK	YDTPKPK	2	YDTPKPK2	71710.3		43538.5
Q66H74	Q66H74	GLP3L_RAT	Golph3l	Golgi phosphoprotein 3-like	1	YDVAMNR	YDVAMNR	2	YDVAMNR2	28916.3	23299.7	34754.7
P22734	P22734	COMT_RAT	Comt	Catechol O-methyltransferase	1	YDVDTLDMVFLDHWK	YDVDTLDMVFLDHWK	3	YDVDTLDMVFLDHWK3	4109.62	2658.48	3670.1
P22734	P22734	COMT_RAT	Comt	Catechol O-methyltransferase	1	YDVDTLDMVFLDHWKDR	YDVDTLDMVFLDHWKDR	4	YDVDTLDMVFLDHWKDR4	14886.4	6450.15	14158.1
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	YDVEIVEEYFAR	YDVEIVEEYFAR	2	YDVEIVEEYFAR2	16940.8	8755.76	14299.2
D3ZE59	D3ZE59	D3ZE59_RAT	Tmem115	Transmembrane protein 115	1	YDVGAPSSITISLPGTDPQDAER	YDVGAPSSITISLPGTDPQDAER	3	YDVGAPSSITISLPGTDPQDAER3	6252.52	4905.3	8587.7
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	YDVGGGER	YDVGGGER	2	YDVGGGER2	385405	326107	344325
A0A8I6AUM0	A0A8I6AUM0	A0A8I6AUM0_RAT	Ddhd2	DDHD domain containing 2	1	YDVHLGER	YDVHLGER	2	YDVHLGER2	6505.7	6466.29	6789.01
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	YDVLICR	YDVLIC(UniMod:4)R	2	YDVLIC(UniMod:4)R2	16201.1	29038.2	17609.5
D3ZJA9	D3ZJA9	D3ZJA9_RAT	Slc27a3	Solute carrier family 27 member 3	1	YDVMTGEPIR	YDVMTGEPIR	2	YDVMTGEPIR2	1687.19		
O35165	O35165	GOSR2_RAT	Gosr2	Golgi SNAP receptor complex member 2	1	YDVQHLQTALR	YDVQHLQTALR	2	YDVQHLQTALR2	3924.46	2936.48	6956.62
O35165	O35165	GOSR2_RAT	Gosr2	Golgi SNAP receptor complex member 2	1	YDVQHLQTALR	YDVQHLQTALR	3	YDVQHLQTALR3	75649.9	89278.4	93863.8
B0BNG0	B0BNG0	EMC2_RAT	Emc2	ER membrane protein complex subunit 2	1	YDVTWEEMR	YDVTWEEMR	2	YDVTWEEMR2	50307.3	42740.3	61661.1
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	YDWLDIWDGIPHVGPLIGK	YDWLDIWDGIPHVGPLIGK	3	YDWLDIWDGIPHVGPLIGK3	25149.1	23796.9	13616.4
Q6Q0N3	Q6Q0N3	NT5D2_RAT	Nt5dc2	5'-nucleotidase domain-containing protein 2	1	YDYDPSFAIR	YDYDPSFAIR	2	YDYDPSFAIR2	25909.3	20534.5	27524.4
P38652	P38652	PGM1_RAT	Pgm1	Phosphoglucomutase-1	1	YDYEEVEAEGANK	YDYEEVEAEGANK	2	YDYEEVEAEGANK2	2986.46	3192.6	4195.11
Q5XIG8	Q5XIG8	STRAP_RAT	Strap	Serine-threonine kinase receptor-associated protein	1	YDYNSGEELESYK	YDYNSGEELESYK	2	YDYNSGEELESYK2	36428.7	33829.8	30608.4
Q9QWJ9	Q9QWJ9	NRP1_RAT	Nrp1	Neuropilin-1	1	YDYVEVIDGENEGGR	YDYVEVIDGENEGGR	2	YDYVEVIDGENEGGR2	17287.1	11947.6	10263.4
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	YEAAGTLVTLSSAPTAIK	YEAAGTLVTLSSAPTAIK	2	YEAAGTLVTLSSAPTAIK2	116660	142812	130773
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	YEAAGTLVTLSSAPTAIK	YEAAGTLVTLSSAPTAIK	3	YEAAGTLVTLSSAPTAIK3	46887.3	50900.4	50156.2
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	YEAANWK	YEAANWK	1	YEAANWK1	68392.8	71481.9	80183.9
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	YEAANWK	YEAANWK	2	YEAANWK2	2.9983e+06	3.22368e+06	3.70082e+06
D3ZHA1	D3ZHA1	D3ZHA1_RAT	B4gat1	Beta-1,4-glucuronyltransferase 1	1	YEAAVPDPR	YEAAVPDPR	2	YEAAVPDPR2	5353.13	2736.54	5282.8
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	YEADEWDREPLQVFVVPHSHNDPGWLK	YEADEWDREPLQVFVVPHSHNDPGWLK	4	YEADEWDREPLQVFVVPHSHNDPGWLK4	11521.3	19158.3	18516.8
Q80VJ4	Q80VJ4	GPCP1_RAT	Gpcpd1	Glycerophosphocholine phosphodiesterase GPCPD1	1	YEADPVELFEIPVK	YEADPVELFEIPVK	2	YEADPVELFEIPVK2	10345.8	20063.5	21526.5
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	YEAEVQALTEK	YEAEVQALTEK	2	YEAEVQALTEK2	2292.32		
Q920H8	Q920H8	HEPH_RAT	Heph	Hephaestin	1	YEAFQDETFQERLHQEEETHLGILGPVIR	YEAFQDETFQERLHQEEETHLGILGPVIR	4	YEAFQDETFQERLHQEEETHLGILGPVIR4	7346.27	8451.09	10151.9
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	YEAFQQGHCYEPFVK	YEAFQQGHC(UniMod:4)YEPFVK	2	YEAFQQGHC(UniMod:4)YEPFVK2	5931.36	10362.3	7530.85
F1MA42	F1MA42	F1MA42_RAT	Sez6	Seizure related 6 homolog	1	YEAFQQGHCYEPFVK	YEAFQQGHC(UniMod:4)YEPFVK	3	YEAFQQGHC(UniMod:4)YEPFVK3	45712.1	59153.8	56817.2
Q99N02	Q99N02	SO3A1_RAT	Slco3a1	Solute carrier organic anion transporter family member 3A1	1	YEAGEIR	YEAGEIR	2	YEAGEIR2	49720.9	57997.2	57017.1
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	YEALKEPMVAR	YEALKEPMVAR	2	YEALKEPMVAR2	45086.8	47815	48048.3
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	YEALKEPMVAR	YEALKEPMVAR	3	YEALKEPMVAR3	524029	664308	629949
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	YEALLLTHESSIR	YEALLLTHESSIR	2	YEALLLTHESSIR2	223248	185469	160106
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	YEALLLTHESSIR	YEALLLTHESSIR	3	YEALLLTHESSIR3	2.29388e+06	1.95536e+06	1.98327e+06
Q76MX4	Q76MX4	MAFG_RAT	Mafg	Transcription factor MafG	1	YEALQNFAR	YEALQNFAR	2	YEALQNFAR2	4354.27	2591.42	5272.51
Q9JKC9	Q9JKC9	SYNRG_RAT	Synrg	Synergin gamma	1	YEALREEGSPGALSTSTVEGAHNPPVSSSK	YEALREEGSPGALSTSTVEGAHNPPVSSSK	4	YEALREEGSPGALSTSTVEGAHNPPVSSSK4	8966.43	10051.3	14067
F7EYC4	F7EYC4	F7EYC4_RAT	Tom1	Target of myb1 membrane trafficking protein	1	YEAPQTTDGLAGALDAR	YEAPQTTDGLAGALDAR	2	YEAPQTTDGLAGALDAR2	16210.3	17283.4	18057.8
F7EYC4	F7EYC4	F7EYC4_RAT	Tom1	Target of myb1 membrane trafficking protein	1	YEAPQTTDGLAGALDAR	YEAPQTTDGLAGALDAR	3	YEAPQTTDGLAGALDAR3	17939.3	13203.9	15158.7
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	YEASYDMSDVGK	YEASYDMSDVGK	2	YEASYDMSDVGK2	132642	127325	162276
P02770	P02770	ALBU_RAT	Alb	Albumin	1	YEATLEK	YEATLEK	1	YEATLEK1	305255	270122	265921
P02770	P02770	ALBU_RAT	Alb	Albumin	1	YEATLEK	YEATLEK	2	YEATLEK2	1.68638e+07	1.59659e+07	1.71413e+07
A0A8I5ZT87	A0A8I5ZT87	A0A8I5ZT87_RAT	Mycbp	Myc binding protein	1	YEATVEENK	YEATVEENK	2	YEATVEENK2	56422.8	53085	53036.9
A0A8I5ZT87	A0A8I5ZT87	A0A8I5ZT87_RAT	Mycbp	Myc binding protein	1	YEATVEENKK	YEATVEENKK	2	YEATVEENKK2	7312.89		17438.3
P97531	P97531	CIP4_RAT	Trip10	Cdc42-interacting protein 4	1	YEAWLAEAESR	YEAWLAEAESR	2	YEAWLAEAESR2		10539.6	8387.81
F1LMI3	F1LMI3	F1LMI3_RAT	Cdh3	Cadherin 3	1	YEAWVPENAVGHEVQR	YEAWVPENAVGHEVQR	3	YEAWVPENAVGHEVQR3	58458.7	45633.6	51303.1
Q5XIJ5	Q5XIJ5	AB17A_RAT	Abhd17a	Alpha/beta hydrolase domain-containing protein 17A	1	YECAAVVLHSPLTSGMR	YEC(UniMod:4)AAVVLHSPLTSGMR	3	YEC(UniMod:4)AAVVLHSPLTSGMR3	12580	10604.9	12468.4
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	YECEESFTTLNVDIR	YEC(UniMod:4)EESFTTLNVDIR	2	YEC(UniMod:4)EESFTTLNVDIR2	5130.31	3122.17	6693.49
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	YECLAEEIK	YEC(UniMod:4)LAEEIK	2	YEC(UniMod:4)LAEEIK2	14855.8	18627.3	21305.4
B5DF45	B5DF45	TRAF6_RAT	Traf6	TNF receptor-associated factor 6	1	YECPICLMALR	YEC(UniMod:4)PIC(UniMod:4)LMALR	2	YEC(UniMod:4)PIC(UniMod:4)LMALR2	21217	15504.7	19665
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	YECRPGYIK	YEC(UniMod:4)RPGYIK	2	YEC(UniMod:4)RPGYIK2	35083	16330.5	38414.3
Q63135	Q63135	CR1L_RAT	Cr1l	Complement component receptor 1-like protein	1	YECRPGYIK	YEC(UniMod:4)RPGYIK	3	YEC(UniMod:4)RPGYIK3	806577	795853	922450
Q5BK49	Q5BK49	TACT_RAT	Cd96	T-cell surface protein tactile	1	YECSFTMYPTGTK	YEC(UniMod:4)SFTMYPTGTK	2	YEC(UniMod:4)SFTMYPTGTK2	2696.34	6038.6	2058.58
Q64604	A0A8I6A1V1;Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	0	YECVATNSAGTR	YEC(UniMod:4)VATNSAGTR	2	YEC(UniMod:4)VATNSAGTR2	17842.4	16813.5	14898.2
Q64605	Q64605	PTPRS_RAT	Ptprs	Receptor-type tyrosine-protein phosphatase S	1	YECVATNSAGVR	YEC(UniMod:4)VATNSAGVR	2	YEC(UniMod:4)VATNSAGVR2	4911.99	6873.59	4067.39
A0A0G2K1Q0	A0A0G2K1Q0	A0A0G2K1Q0_RAT	Pik3c2b	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta	1	YECYLDSPLVR	YEC(UniMod:4)YLDSPLVR	2	YEC(UniMod:4)YLDSPLVR2	8284.16	4475.73	6211.65
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	YEDAEVLDNTSTGIVK	YEDAEVLDNTSTGIVK	2	YEDAEVLDNTSTGIVK2	119157	134789	126602
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	YEDAEVLDNTSTGIVK	YEDAEVLDNTSTGIVK	3	YEDAEVLDNTSTGIVK3	11206	18044	
Q6P9X4	Q78EG7;Q6P9X4	TP4A2_RAT	Ptp4a2	Protein tyrosine phosphatase type IVA 2	0	YEDAVQFIR	YEDAVQFIR	2	YEDAVQFIR2	24767.1	12317.1	19848.6
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	YEDAYQYQNIFGPLVK	YEDAYQYQNIFGPLVK	2	YEDAYQYQNIFGPLVK2	3291.68	4275.48	7856.28
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	YEDAYQYQNIFGPLVK	YEDAYQYQNIFGPLVK	3	YEDAYQYQNIFGPLVK3	9175.64	2715.12	5598.86
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	YEDDITNR	YEDDITNR	2	YEDDITNR2	50592.1	34390.3	62150.5
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	YEDDVTDPERPLSFGVTLR	YEDDVTDPERPLSFGVTLR	3	YEDDVTDPERPLSFGVTLR3	3630.35	9215.86	
Q6P6Q2	A0A8I5ZR22;Q6IG02;Q6IG01;Q6IMF3;Q10758;Q6P6Q2;Q6IG05	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	0	YEDEINK	YEDEINK	1	YEDEINK1	15675.3	13183.8	5922.56
Q6P6Q2	A0A8I5ZR22;Q6IG02;Q6IG01;Q6IMF3;Q10758;Q6P6Q2;Q6IG05	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	0	YEDEINK	YEDEINK	2	YEDEINK2	2.19071e+06	2.33593e+06	1.92798e+06
Q6P6Q2	A0A8I5ZR22;Q6IG02;Q6IG01;Q6IMF3;Q10758;Q6P6Q2;Q6IG05	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	0	YEDEINKR	YEDEINKR	2	YEDEINKR2	200936	175804	140295
F1LQ91	F1LQ91	F1LQ91_RAT	Dock11	Dedicator of cytokinesis 11	1	YEDFSGDFR	YEDFSGDFR	2	YEDFSGDFR2	8018.06	13774.8	14692.5
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	YEDFVVDGFNVLYNK	YEDFVVDGFNVLYNK	2	YEDFVVDGFNVLYNK2	13754.7	19086.4	13682
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	YEDFVVDGFNVLYNK	YEDFVVDGFNVLYNK	3	YEDFVVDGFNVLYNK3	2428.09	1898.57	3443.37
Q63207	Q63207	FA10_RAT	F10	Coagulation factor X	1	YEDGDQCESSPCQNQGECR	YEDGDQC(UniMod:4)ESSPC(UniMod:4)QNQGEC(UniMod:4)R	3	YEDGDQC(UniMod:4)ESSPC(UniMod:4)QNQGEC(UniMod:4)R3	84537.4	92022.3	88625.1
D3ZIT4	D3ZIT4	D3ZIT4_RAT	Anapc7	Anaphase promoting complex subunit 7	1	YEDGIALLR	YEDGIALLR	2	YEDGIALLR2	13658.9	20656.6	13109.4
Q3T1J1	Q3T1J1;G3V7J7	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	0	YEDICPSTHNMDVPNIK	YEDIC(UniMod:4)PSTHNMDVPNIK	3	YEDIC(UniMod:4)PSTHNMDVPNIK3	1.66681e+06	1.61408e+06	1.6208e+06
Q3T1J1	Q3T1J1;G3V7J7	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	0	YEDICPSTHNMDVPNIKR	YEDIC(UniMod:4)PSTHNMDVPNIKR	3	YEDIC(UniMod:4)PSTHNMDVPNIKR3		2986.37	5086.02
Q3T1J1	Q3T1J1;G3V7J7	IF5A1_RAT	Eif5a	Eukaryotic translation initiation factor 5A-1	0	YEDICPSTHNMDVPNIKR	YEDIC(UniMod:4)PSTHNMDVPNIKR	4	YEDIC(UniMod:4)PSTHNMDVPNIKR4	27738.7	39859.6	55565.8
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	YEDLAPCITLK	YEDLAPC(UniMod:4)ITLK	2	YEDLAPC(UniMod:4)ITLK2	93664	105472	104314
A0A8I5Y652	A0A8I5Y652	A0A8I5Y652_RAT	Tacc3	Transforming, acidic coiled-coil containing protein 3	1	YEDLNTK	YEDLNTK	2	YEDLNTK2	13347.6		8915.99
G3V9A3	Q5EBB0;G3V9A3	G3V9A3_RAT	Sfn	Stratifin	0	YEDMAAFMK	YEDMAAFMK	2	YEDMAAFMK2	4374.47	7442.76	7617.44
D3ZWH1	D3ZWH1	D3ZWH1_RAT	Stab1	Stabilin 1	1	YEDQPQQFSIQK	YEDQPQQFSIQK	2	YEDQPQQFSIQK2	7664.11	5110.11	4318.82
Q5M834	Q5M834	DTBP1_RAT	Dtnbp1	Dysbindin	1	YEDTWAALHR	YEDTWAALHR	2	YEDTWAALHR2	2641.54	1681.6	
Q5M834	Q5M834	DTBP1_RAT	Dtnbp1	Dysbindin	1	YEDTWAALHR	YEDTWAALHR	3	YEDTWAALHR3	11179	14388.1	8937.44
O35217	O35217	MINP1_RAT	Minpp1	Multiple inositol polyphosphate phosphatase 1	1	YEDVNPWLLGDPVAPR	YEDVNPWLLGDPVAPR	2	YEDVNPWLLGDPVAPR2	13682.1	8709.74	7681.31
Q68FQ7	Q68FQ7	RPAP3_RAT	Rpap3	RNA polymerase II-associated protein 3	1	YEEAERDCTQAILLDGSYSK	YEEAERDC(UniMod:4)TQAILLDGSYSK	3	YEEAERDC(UniMod:4)TQAILLDGSYSK3	3205.27	2209.88	
A0A8I5ZWM9	A0A8I5ZWM9	A0A8I5ZWM9_RAT	Vps41	Vacuolar protein sorting-associated protein 41 homolog	1	YEEALMAAEISHR	YEEALMAAEISHR	3	YEEALMAAEISHR3	7596.92	6203.37	4398.25
D3ZIK0	D3ZIK0	D3ZIK0_RAT	Glce	heparosan-N-sulfate-glucuronate 5-epimerase	1	YEEIDCLINDEHTIR	YEEIDC(UniMod:4)LINDEHTIR	3	YEEIDC(UniMod:4)LINDEHTIR3	6338.33	3560.7	5854.92
P85834	P85834	EFTU_RAT	Tufm	Elongation factor Tu, mitochondrial	1	YEEIDNAPEER	YEEIDNAPEER	2	YEEIDNAPEER2	143463	118294	135425
P54921	P54921	SNAA_RAT	Napa	Alpha-soluble NSF attachment protein	1	YEELFPAFSDSR	YEELFPAFSDSR	2	YEELFPAFSDSR2	746453	671343	673826
Q63619	Q63619	COQ7_RAT	Coq7	5-demethoxyubiquinone hydroxylase, mitochondrial (Fragment)	1	YEELLQVIK	YEELLQVIK	2	YEELLQVIK2	8547.29		6306.37
Q4FZU2	A0A8I5ZMI8;A0A0G2JUG1;A0A8I6G380;Q4FZU2;A0A8I6AP90	K2C6A_RAT	Krt6a	Keratin, type II cytoskeletal 6A	0	YEELQITAGR	YEELQITAGR	2	YEELQITAGR2	110487	87993.7	2.06603e+06
Q4FZU2	A0A8I5ZMI8;A0A0G2JUG1;A0A8I6G380;Q4FZU2;A0A8I6AP90	K2C6A_RAT	Krt6a	Keratin, type II cytoskeletal 6A	0	YEELQITAGR	YEELQITAGR	3	YEELQITAGR3	10270	11439.9	9936.32
Q6P6Q2	Q6P6Q2	K2C5_RAT	Krt5	Keratin, type II cytoskeletal 5	1	YEELQQTAGR	YEELQQTAGR	2	YEELQQTAGR2	419284	400789	289272
Q6IG05	Q6IG05	K2C75_RAT	Krt75	Keratin, type II cytoskeletal 75	1	YEELQVTAGR	YEELQVTAGR	2	YEELQVTAGR2	75292.8	64093.2	59379.7
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	YEELSHLAESK	YEELSHLAESK	2	YEELSHLAESK2	19193.1	18539	18855.8
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	YEELSHLAESK	YEELSHLAESK	3	YEELSHLAESK3	100424	100846	125583
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	YEELYCFSFNPK	YEELYC(UniMod:4)FSFNPK	2	YEELYC(UniMod:4)FSFNPK2	51840.2	62225	55208.9
G3V6U9	G3V6U9	SETD3_RAT	Setd3	Actin-histidine N-methyltransferase	1	YEESDLGLLEGGVGDSR	YEESDLGLLEGGVGDSR	2	YEESDLGLLEGGVGDSR2	7012.48	9335.37	5984.15
Q29RW1	Q29RW1	MYH4_RAT	Myh4	Myosin-4	1	YEETQAELEASQK	YEETQAELEASQK	2	YEETQAELEASQK2	1905.09		
A0A0G2K9K2	A0A0G2K9K2	A0A0G2K9K2_RAT	Tacc1	Transforming, acidic coiled-coil containing protein 1	1	YEETREEVLEMR	YEETREEVLEMR	3	YEETREEVLEMR3	115906	136734	147074
Q63610	Q63610;P58775;P09495;P04692;A0A8I5YC74	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	0	YEEVARK	YEEVARK	1	YEEVARK1			1052.81
Q63610	Q63610;P58775;P09495;P04692;A0A8I5YC74	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	0	YEEVARK	YEEVARK	2	YEEVARK2			154120
P37285	P37285	KLC1_RAT	Klc1	Kinesin light chain 1	1	YEEVEYYYQR	YEEVEYYYQR	2	YEEVEYYYQR2	65022.8	77314.4	82988.4
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	YEEYDNAIITMMNHPTDAWK	YEEYDNAIITMMNHPTDAWK	3	YEEYDNAIITMMNHPTDAWK3	244735	247833	267261
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	YEEYDNAIITMMNHPTDAWKEGQFK	YEEYDNAIITMMNHPTDAWKEGQFK	4	YEEYDNAIITMMNHPTDAWKEGQFK4	3818.27	4837.29	8695.18
D3ZF97	D3ZF97	D3ZF97_RAT	Erlec1	Endoplasmic reticulum lectin	1	YEFCYGK	YEFC(UniMod:4)YGK	2	YEFC(UniMod:4)YGK2	23996.2	19395.3	14463.7
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	YEFGESDLR	YEFGESDLR	2	YEFGESDLR2	207596	229730	177551
P09812	P53534;P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	0	YEFGIFNQK	YEFGIFNQK	2	YEFGIFNQK2	8533.56	5470.85	6211.87
A0A8I6GM04	A0A0G2K988;A0A8I6GM04	A0A8I6GM04_RAT	Daam1	Dishevelled associated activator of morphogenesis 1	0	YEFLMLGIQPVIDK	YEFLMLGIQPVIDK	2	YEFLMLGIQPVIDK2	5013	1576.62	
Q4G063	Q4G063	CREL2_RAT	Creld2	Protein disulfide isomerase Creld2	1	YEFSEIR	YEFSEIR	2	YEFSEIR2	197823	170624	174904
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	YEGASAEVGK	YEGASAEVGK	2	YEGASAEVGK2	77625.2	74732	87481
F7EYG9	F7EYG9	F7EYG9_RAT	Stat2	Signal transducer and activator of transcription	1	YEGDMFGQGVDLQNAQVTELLQR	YEGDMFGQGVDLQNAQVTELLQR	3	YEGDMFGQGVDLQNAQVTELLQR3		2969.06	2922.57
F1LZW6	F1LX07;F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	0	YEGFFGLYR	YEGFFGLYR	2	YEGFFGLYR2	156710	201454	186790
P97700	P97700	M2OM_RAT	Slc25a11	Mitochondrial 2-oxoglutarate/malate carrier protein	1	YEGFFSLWK	YEGFFSLWK	2	YEGFFSLWK2	64336.8	55844.5	52211.5
Q5RK08	Q5RK08	Q5RK08_RAT	Nipsnap2	Glioblastoma amplified sequence	1	YEGGYPALTEVMNK	YEGGYPALTEVMNK	2	YEGGYPALTEVMNK2	40642.6	18561.6	35684.1
A0A8I5ZRV3	A0A8I5ZRV3	A0A8I5ZRV3_RAT	Fam3a	FAM3 metabolism regulating signaling molecule A	1	YEGWPEALEMEGCIPR	YEGWPEALEMEGC(UniMod:4)IPR	2	YEGWPEALEMEGC(UniMod:4)IPR2	10154.7	8980.62	4807.27
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	YEHAFNSIVWR	YEHAFNSIVWR	2	YEHAFNSIVWR2	13017.1	8103.99	
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	YEHAFNSIVWR	YEHAFNSIVWR	3	YEHAFNSIVWR3	53844.9	45155.5	38438
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	YEHALSQCSVDVYK	YEHALSQC(UniMod:4)SVDVYK	2	YEHALSQC(UniMod:4)SVDVYK2	1061.3	2058.19	
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	YEHALSQCSVDVYK	YEHALSQC(UniMod:4)SVDVYK	3	YEHALSQC(UniMod:4)SVDVYK3	12739.4	10206.2	11711.8
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	YEHALSQCSVDVYKK	YEHALSQC(UniMod:4)SVDVYKK	3	YEHALSQC(UniMod:4)SVDVYKK3	9028.43	7834.34	6147.71
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	YEHALSQCSVDVYKK	YEHALSQC(UniMod:4)SVDVYKK	4	YEHALSQC(UniMod:4)SVDVYKK4	18346.4	22048.4	21180.7
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	YEHANDDNTSLQSDPEGEK	YEHANDDNTSLQSDPEGEK	3	YEHANDDNTSLQSDPEGEK3	32206.2	32441.7	26353.5
Q4QR85	Q4QR85	MEP50_RAT	Wdr77	Methylosome protein WDR77	1	YEHDDIVSTVTVLSSGTQAVSGSK	YEHDDIVSTVTVLSSGTQAVSGSK	3	YEHDDIVSTVTVLSSGTQAVSGSK3	18422.9	24794.6	25566.2
P47858	P47858	PFKAM_RAT	Pfkm	ATP-dependent 6-phosphofructokinase, muscle type	1	YEIDLDTSDHAHLEHISR	YEIDLDTSDHAHLEHISR	3	YEIDLDTSDHAHLEHISR3	1911.3		
P47858	P47858	PFKAM_RAT	Pfkm	ATP-dependent 6-phosphofructokinase, muscle type	1	YEIDLDTSDHAHLEHISR	YEIDLDTSDHAHLEHISR	4	YEIDLDTSDHAHLEHISR4	4402.13	5597.02	5139
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	YEIENCLANK	YEIENC(UniMod:4)LANK	2	YEIENC(UniMod:4)LANK2	11999.8	4134.14	8427.38
Q05695	Q05695	L1CAM_RAT	L1cam	Neural cell adhesion molecule L1	1	YEIHLMR	YEIHLMR	2	YEIHLMR2	5646.7		
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	YEILTPNSIPK	YEILTPNSIPK	2	YEILTPNSIPK2	4.40475e+06	5.2929e+06	5.29261e+06
Q62812	Q62812	MYH9_RAT	Myh9	Myosin-9	1	YEILTPNSIPK	YEILTPNSIPK	3	YEILTPNSIPK3	1370.17	1676.49	2262.42
Q6AY86	Q6AY86	VP26A_RAT	Vps26a	Vacuolar protein sorting-associated protein 26A	1	YEIMDGAPVK	YEIMDGAPVK	2	YEIMDGAPVK2	47808.2	50484.4	55095.5
B1WBS4	B1WBS4	B1WBS4_RAT	Vps26b	VPS26 retromer complex component B	1	YEIMDGAPVR	YEIMDGAPVR	2	YEIMDGAPVR2	19455.8	16034.6	10244.7
B1WBS4	B1WBS4	B1WBS4_RAT	Vps26b	VPS26 retromer complex component B	1	YEIMDGAPVRGESIPIR	YEIMDGAPVRGESIPIR	3	YEIMDGAPVRGESIPIR3	34933.8	26583.1	31188
Q9ERB4	Q9ERB4	CSPG2_RAT	Vcan	Versican core protein	1	YEINSLIR	YEINSLIR	2	YEINSLIR2	20301.9	47794.4	44662.9
Q8VHQ7	Q8VHQ7	SYTL4_RAT	Sytl4	Synaptotagmin-like protein 4	1	YEISESLLAQR	YEISESLLAQR	2	YEISESLLAQR2	380519	357348	382271
Q1RP74	Q1RP74	Q1RP74_RAT	Tbcb	Tubulin folding cofactor B	1	YEISPEAYER	YEISPEAYER	2	YEISPEAYER2	258860	256435	234386
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	YEISSLVR	YEISSLVR	2	YEISSLVR2	22021.1	18996.7	13184.1
Q9JLZ1	Q9JLZ1	GLRX3_RAT	Glrx3	Glutaredoxin-3	1	YEISSVPTFLFFK	YEISSVPTFLFFK	2	YEISSVPTFLFFK2	62981.1	75172.5	79645.8
P21533	A0A0G2KBA1;P21533	RL6_RAT	Rpl6	Large ribosomal subunit protein eL6	0	YEITEQR	YEITEQR	2	YEITEQR2	67837.3	77527.8	67970.4
Q4KM45	Q4KM45	ADSSP_RAT	Adissp	Adipose-secreted signaling protein	1	YEITFTLPAVR	YEITFTLPAVR	2	YEITFTLPAVR2	12633.1	10410.1	9898.51
A0A8I5ZUI2	A0A8I5ZUI2	A0A8I5ZUI2_RAT	Ano10	Anoctamin	1	YEKETLENQNLYLVGASNIR	YEKETLENQNLYLVGASNIR	3	YEKETLENQNLYLVGASNIR3	13499.8	9684.51	12611.7
O35112	O35112	CD166_RAT	Alcam	CD166 antigen	1	YEKPDGSPVFIAFR	YEKPDGSPVFIAFR	3	YEKPDGSPVFIAFR3	10802.1	11705.5	7484.61
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	YEKPGSPPR	YEKPGSPPR	2	YEKPGSPPR2			8.46514e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	YEKPGSPPREVVPR	YEKPGSPPREVVPR	3	YEKPGSPPREVVPR3	259193	309297	252495
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	YEKPGSPPREVVPR	YEKPGSPPREVVPR	4	YEKPGSPPREVVPR4	672017	966455	1.11095e+06
A0A8I5ZTB8	A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	YELCDTYPALLAVPANIPDEELKR	YELC(UniMod:4)DTYPALLAVPANIPDEELKR	3	YELC(UniMod:4)DTYPALLAVPANIPDEELKR3	23354.8	14188.7	24399.5
F1LWZ3	F1LWZ3	F1LWZ3_RAT	Rhbdf2	Inactive rhomboid protein	1	YELDQVLH	YELDQVLH	2	YELDQVLH2	8998.57	9346.62	13728.4
Q63692	Q63692	CDC37_RAT	Cdc37	Hsp90 co-chaperone Cdc37	1	YELEAFK	YELEAFK	1	YELEAFK1	1997.95	1191.63	3344.16
Q63692	Q63692	CDC37_RAT	Cdc37	Hsp90 co-chaperone Cdc37	1	YELEAFK	YELEAFK	2	YELEAFK2	185441	185689	163082
Q63692	Q63692	CDC37_RAT	Cdc37	Hsp90 co-chaperone Cdc37	1	YELEAFKER	YELEAFKER	2	YELEAFKER2	10548.9	15069.3	14709.7
Q63692	Q63692	CDC37_RAT	Cdc37	Hsp90 co-chaperone Cdc37	1	YELEAFKER	YELEAFKER	3	YELEAFKER3	113327	126539	126730
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	YELEEDGAPVCEDPNSR	YELEEDGAPVC(UniMod:4)EDPNSR	3	YELEEDGAPVC(UniMod:4)EDPNSR3	1857.4		4578.88
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	YELEILAVDR	YELEILAVDR	2	YELEILAVDR2	15515.3	11123.3	5541.32
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	YELELKPTGEVEQYSASATYELLK	YELELKPTGEVEQYSASATYELLK	3	YELELKPTGEVEQYSASATYELLK3	306275	331844	268380
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	YELELKPTGEVEQYSASATYELLKEDK	YELELKPTGEVEQYSASATYELLKEDK	4	YELELKPTGEVEQYSASATYELLKEDK4	511505	621369	543502
A0A8I6ASH2	A0A8I6ASH2	A0A8I6ASH2_RAT	Hspg2	Heparan sulfate proteoglycan 2	1	YELGSGLAVLR	YELGSGLAVLR	2	YELGSGLAVLR2	35902.3	32314.5	29472.4
Q9JIL3	Q9JKU6;Q9JIL3	ILF3_RAT	Ilf3	Interleukin enhancer-binding factor 3	0	YELISETGGSHDK	YELISETGGSHDK	3	YELISETGGSHDK3	7492.34	2820.2	
F1LQF7	F1LQF7	F1LQF7_RAT	Trpc7	Transient receptor potential cation channel, subfamily C, member 7	1	YELLEEK	YELLEEK	2	YELLEEK2	54921.9	46077.8	74729.1
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	YELLNVLEFTSSR	YELLNVLEFTSSR	2	YELLNVLEFTSSR2	24925.8	35875.2	30840
Q68HB8	Q68HB8	Q68HB8_RAT	Pcdh7	Protocadherin 7	1	YELLQEPGGGGGGGEGR	YELLQEPGGGGGGGEGR	2	YELLQEPGGGGGGGEGR2	11142.1	12319.6	15265.2
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	YELLSSGSLR	YELLSSGSLR	2	YELLSSGSLR2	22063	27258.2	25993.1
D3ZX06	D3ZX06	D3ZX06_RAT	Ghdc	GH3 domain containing	1	YELVLTDSTSLTR	YELVLTDSTSLTR	2	YELVLTDSTSLTR2	8686.97		
Q6P7D4	Q6P7D4	CP20A_RAT	Cyp20a1	Cytochrome P450 20A1	1	YELVTSCR	YELVTSC(UniMod:4)R	2	YELVTSC(UniMod:4)R2	10680.5	9179.39	10212.7
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	YELVVDK	YELVVDK	2	YELVVDK2	37426.2	40065.4	33929.2
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	YEMEETEVVITSYQK	YEMEETEVVITSYQK	2	YEMEETEVVITSYQK2	67310.7	60509.7	50232
Q62736	Q62736	CALD1_RAT	Cald1	Non-muscle caldesmon	1	YEMEETEVVITSYQK	YEMEETEVVITSYQK	3	YEMEETEVVITSYQK3	26163.8	21050.1	21306.9
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	YEMFAQTLQQSR	YEMFAQTLQQSR	2	YEMFAQTLQQSR2	1.05689e+06	955145	1.1269e+06
P46462	P46462	TERA_RAT	Vcp	Transitional endoplasmic reticulum ATPase	1	YEMFAQTLQQSR	YEMFAQTLQQSR	3	YEMFAQTLQQSR3	65649.7	68342.7	89426.1
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	YEMHELLK	YEMHELLK	2	YEMHELLK2	4.56107e+06	4.20422e+06	3.82749e+06
P29147	P29147	BDH_RAT	Bdh1	D-beta-hydroxybutyrate dehydrogenase, mitochondrial	1	YEMHPLGVK	YEMHPLGVK	2	YEMHPLGVK2	4577	2773.54	5435.12
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	YEMYLKVQPK	YEMYLKVQPK	2	YEMYLKVQPK2	2582.54	1511.47	6840.22
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	YEMYLKVQPK	YEMYLKVQPK	3	YEMYLKVQPK3	38417.5	55385	55900
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	YEMYLKVQPKQLVR	YEMYLKVQPKQLVR	4	YEMYLKVQPKQLVR4	9103.44	6115.08	17962.1
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	YENCWLAR	YENC(UniMod:4)WLAR	2	YENC(UniMod:4)WLAR2	59683.1	95624.9	105198
Q6IFV4	Q6IFV3;Q6IFV4;Q6IFW5	K1C13_RAT	Krt13	Keratin, type I cytoskeletal 13	0	YENELALR	YENELALR	2	YENELALR2		14067.8	
P22985	P22985	XDH_RAT	Xdh	Xanthine dehydrogenase/oxidase	1	YENELSLR	YENELSLR	2	YENELSLR2	61677.8	68478.8	56212.4
Q6IFW6	Q6IFW6	K1C10_RAT	Krt10	Keratin, type I cytoskeletal 10	1	YENEVALR	YENEVALR	2	YENEVALR2	2.15765e+06	2.07916e+06	1.54247e+06
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	YENFDDIK	YENFDDIK	2	YENFDDIK2	9375.63	18960.6	11883.3
A0A0G2K8S0	A0A0G2K8S0	A0A0G2K8S0_RAT	Pdxdc1	Pyridoxal-dependent decarboxylase domain containing 1	1	YENGCAYFHEK	YENGC(UniMod:4)AYFHEK	3	YENGC(UniMod:4)AYFHEK3	6728.28	7620.24	3844.07
P70569	P70569	MYO5B_RAT	Myo5b	Unconventional myosin-Vb	1	YENLRDEQQTPGHR	YENLRDEQQTPGHR	3	YENLRDEQQTPGHR3	5832.73		
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	YENNEGSLAETVAISNLGVAK	YENNEGSLAETVAISNLGVAK	3	YENNEGSLAETVAISNLGVAK3	10967.2	6744.51	14435.7
P63329	P20651;P63329;E2CWF0	PP2BA_RAT	Ppp3ca	Protein phosphatase 3 catalytic subunit alpha	0	YENNVMNIR	YENNVMNIR	2	YENNVMNIR2	105488	104459	120985
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	YENYELTLK	YENYELTLK	2	YENYELTLK2	2.10145e+06	2.65731e+06	2.48856e+06
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	YENYNYLGTSHLLR	YENYNYLGTSHLLR	2	YENYNYLGTSHLLR2	18874.2	20282.1	19936.3
P32551	P32551	QCR2_RAT	Uqcrc2	Cytochrome b-c1 complex subunit 2, mitochondrial	1	YENYNYLGTSHLLR	YENYNYLGTSHLLR	3	YENYNYLGTSHLLR3	109245	93160	122749
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	YEPAAVSEHGDK	YEPAAVSEHGDK	2	YEPAAVSEHGDK2	64937.2	66923.2	40512.5
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	YEPAAVSEHGDK	YEPAAVSEHGDK	3	YEPAAVSEHGDK3	182574	202509	220614
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	YEPAAVSEHGDKK	YEPAAVSEHGDKK	2	YEPAAVSEHGDKK2	53502.3		48119.6
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	YEPAAVSEHGDKK	YEPAAVSEHGDKK	3	YEPAAVSEHGDKK3	68392.1		93594
Q9Z1L0	Q9Z1L0	PK3CB_RAT	Pik3cb	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform	1	YEPFLDCALSR	YEPFLDC(UniMod:4)ALSR	2	YEPFLDC(UniMod:4)ALSR2	13852	12699.3	22407.9
F7ESI5	F7ESI5	F7ESI5_RAT	Cfhr1	Complement factor H-related 1	1	YEPFSPVPGGK	YEPFSPVPGGK	2	YEPFSPVPGGK2	101503	101948	102605
P15384	P15384	KCNA3_RAT	Kcna3	Potassium voltage-gated channel subfamily A member 3	1	YEPLPPALPAAGEQDCCGER	YEPLPPALPAAGEQDC(UniMod:4)C(UniMod:4)GER	3	YEPLPPALPAAGEQDC(UniMod:4)C(UniMod:4)GER3		7297.96	4941.45
P62193	P62193	PRS4_RAT	Psmc1	26S proteasome regulatory subunit 4	1	YEPPVPTR	YEPPVPTR	2	YEPPVPTR2	280824	284276	266143
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	YEPQLPDHWEK	YEPQLPDHWEK	2	YEPQLPDHWEK2	13410.3	11461.5	11840.2
Q68FQ7	Q68FQ7	RPAP3_RAT	Rpap3	RNA polymerase II-associated protein 3	1	YEQAIECYTR	YEQAIEC(UniMod:4)YTR	2	YEQAIEC(UniMod:4)YTR2	7291.24	4285.46	3390.44
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	YEQAIQCYTEAISLCPTEK	YEQAIQC(UniMod:4)YTEAISLC(UniMod:4)PTEK	3	YEQAIQC(UniMod:4)YTEAISLC(UniMod:4)PTEK3	36498.5	39098.9	39374.6
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	YEQGTGCWQGPNR	YEQGTGC(UniMod:4)WQGPNR	2	YEQGTGC(UniMod:4)WQGPNR2	453877	434237	449260
B1WC34	B1WC34	B1WC34_RAT	Prkcsh	Protein kinase C substrate 80K-H	1	YEQGTGCWQGPNR	YEQGTGC(UniMod:4)WQGPNR	3	YEQGTGC(UniMod:4)WQGPNR3	18666.8	27709.6	20605.4
D4ADT5	D4ADT5	D4ADT5_RAT	Rig1	RNA helicase	1	YEQWIVAVHK	YEQWIVAVHK	3	YEQWIVAVHK3	4041.48	5135.93	
Q6AY17	Q6AY17	AB17B_RAT	Abhd17b	Alpha/beta hydrolase domain-containing protein 17B	1	YESAAVILHSPLTSGMR	YESAAVILHSPLTSGMR	3	YESAAVILHSPLTSGMR3	82523.1	25078.6	35390.4
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	YESAYGTQFTPCQLLR	YESAYGTQFTPC(UniMod:4)QLLR	2	YESAYGTQFTPC(UniMod:4)QLLR2	90201.2	90966.2	95217.1
Q64428	Q64428	ECHA_RAT	Hadha	Trifunctional enzyme subunit alpha, mitochondrial	1	YESAYGTQFTPCQLLR	YESAYGTQFTPC(UniMod:4)QLLR	3	YESAYGTQFTPC(UniMod:4)QLLR3	46848.3	61426.2	55566.6
Q5I0H9	Q5I0H9	PDIA5_RAT	Pdia5	Protein disulfide-isomerase A5	1	YESDRTELGFTSFIR	YESDRTELGFTSFIR	3	YESDRTELGFTSFIR3	21604.1	12889.6	20012
D3ZGN7	D3ZGN7	D3ZGN7_RAT	Mical3	F-actin monooxygenase	1	YESELMIFAR	YESELMIFAR	2	YESELMIFAR2	12180.7	7496.73	4739.61
D3ZWS6	D3ZWS6	D3ZWS6_RAT	Naa30	N(alpha)-acetyltransferase 30, NatC catalytic subunit	1	YESELQMPDIMR	YESELQMPDIMR	2	YESELQMPDIMR2	12635.8	11844.2	9062.37
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	YESFEDPAGTIDK	YESFEDPAGTIDK	2	YESFEDPAGTIDK2	132210	148746	117380
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	YESGYMLNSK	YESGYMLNSK	2	YESGYMLNSK2	2.0079e+06	2.58621e+06	2.44977e+06
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	YESLELCR	YESLELC(UniMod:4)R	2	YESLELC(UniMod:4)R2	183130	151400	157096
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	YESLELCRPVLQQGR	YESLELC(UniMod:4)RPVLQQGR	2	YESLELC(UniMod:4)RPVLQQGR2			81204.4
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	YESLELCRPVLQQGR	YESLELC(UniMod:4)RPVLQQGR	3	YESLELC(UniMod:4)RPVLQQGR3	2.36506e+06	2.5463e+06	2.58672e+06
P34058	P82995;P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	YESLTDPSK	YESLTDPSK	2	YESLTDPSK2	1.45971e+06	1.57007e+06	1.45734e+06
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	YESSALPAGQLTSLSDYASR	YESSALPAGQLTSLSDYASR	3	YESSALPAGQLTSLSDYASR3	6329	13776.1	10337.8
Q5HZA9	Q5HZA9	T126A_RAT	Tmem126a	Transmembrane protein 126A	1	YESSPLPQR	YESSPLPQR	2	YESSPLPQR2	12373.6	10548.5	7459.85
P62278	P62278;M0RCY2	RS13_RAT	Rps13	Small ribosomal subunit protein uS15	0	YESSTASALVA	YESSTASALVA	2	YESSTASALVA2	4539.22		
P52303	P52303	AP1B1_RAT	Ap1b1	AP-1 complex subunit beta-1	1	YESVIATLCENLDSLDEPEAR	YESVIATLC(UniMod:4)ENLDSLDEPEAR	3	YESVIATLC(UniMod:4)ENLDSLDEPEAR3			4805.41
A0A8I5ZM80	A0A8I5ZM80	A0A8I5ZM80_RAT	Armh3	Armadillo-like helical domain containing 3	1	YESVNPYIVK	YESVNPYIVK	2	YESVNPYIVK2	4722.26	5085.75	4090.8
A0A8I6ABN1	A0A8I6ABN1	A0A8I6ABN1_RAT	Snx19	Sorting nexin 19	1	YETALSGENSSGLQQLAYHTVNR	YETALSGENSSGLQQLAYHTVNR	3	YETALSGENSSGLQQLAYHTVNR3	4495.05		5502.21
P08650	P08650	CO5_RAT	C5	Complement C5	1	YETCEQR	YETC(UniMod:4)EQR	2	YETC(UniMod:4)EQR2			8450.27
Q29RW1	P02563;P02564;P12847;A0A8I6AIQ9;Q29RW1	MYH4_RAT	Myh4	Myosin-4	0	YETDAIQR	YETDAIQR	2	YETDAIQR2	6146.52	4479.82	9618.32
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	YETEINITK	YETEINITK	2	YETEINITK2	16074.8	17332.6	
Q6IFU7	Q6IFU7	K1C42_RAT	Krt42	Keratin, type I cytoskeletal 42	1	YETELNLR	YETELNLR	2	YETELNLR2	107425	139315	113950
A0A8I5ZQZ1	A0A8I5ZQZ1	A0A8I5ZQZ1_RAT	Nufip2	Nuclear FMR1 interacting protein 2	1	YETGPGGTSR	YETGPGGTSR	2	YETGPGGTSR2	6179.96		8956.52
P48199	P48199	CRP_RAT	Crp	C-reactive protein	1	YETHGDVFIK	YETHGDVFIK	2	YETHGDVFIK2	45678.7	40415.4	38364
P48199	P48199	CRP_RAT	Crp	C-reactive protein	1	YETHGDVFIK	YETHGDVFIK	3	YETHGDVFIK3	24925.7	17104	4.82239e+06
P48199	P48199	CRP_RAT	Crp	C-reactive protein	1	YETHGDVFIKPQLWPLTDCCES	YETHGDVFIKPQLWPLTDC(UniMod:4)C(UniMod:4)ES	3	YETHGDVFIKPQLWPLTDC(UniMod:4)C(UniMod:4)ES3	1.34106e+08	1.24522e+08	1.38393e+08
P69478	P69478	CHSTB_RAT	Chst11	Carbohydrate sulfotransferase 11	1	YETLEEDSNYVLR	YETLEEDSNYVLR	2	YETLEEDSNYVLR2	160443	90408.1	107311
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	YETNLTFVGCVGMLDPPR	YETNLTFVGC(UniMod:4)VGMLDPPR	3	YETNLTFVGC(UniMod:4)VGMLDPPR3	29131.4	18971.5	22479.1
P11507	P11507	AT2A2_RAT	Atp2a2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	YETNLTFVGCVGMLDPPRIEVASSVK	YETNLTFVGC(UniMod:4)VGMLDPPRIEVASSVK	3	YETNLTFVGC(UniMod:4)VGMLDPPRIEVASSVK3	5863.63	10462.6	7505.32
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	YETSGIGEAR	YETSGIGEAR	2	YETSGIGEAR2	63560.7	69375.5	86063.9
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	YETTGLSESR	YETTGLSESR	2	YETTGLSESR2	367191	398733	398408
P37285	A0A8I5Y868;Q5PQM2;P37285	KLC1_RAT	Klc1	Kinesin light chain 1	0	YEVAVPLCK	YEVAVPLC(UniMod:4)K	2	YEVAVPLC(UniMod:4)K2	219477	228610	232153
E9PSX4	E9PSX4	E9PSX4_RAT	Il3ra	Interleukin 3 receptor subunit alpha	1	YEVDSQGSR	YEVDSQGSR	2	YEVDSQGSR2		22638.3	20345.5
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	YEVEWITEYACHR	YEVEWITEYAC(UniMod:4)HR	3	YEVEWITEYAC(UniMod:4)HR3		5194.25	5070.63
D4A731	D4A731	D4A731_RAT	Ankib1	RBR-type E3 ubiquitin transferase	1	YEVIQHVEEQSK	YEVIQHVEEQSK	3	YEVIQHVEEQSK3	14615	13352.9	8464.79
F1M798	F1M798	F1M798_RAT	Bmp1	Metalloendopeptidase	1	YEVNGVKPSIGQR	YEVNGVKPSIGQR	3	YEVNGVKPSIGQR3	23837	27232.6	22623.3
Q5U2N0	Q5U2N0	PYRG2_RAT	Ctps2	CTP synthase 2	1	YEVNPNLINQFENK	YEVNPNLINQFENK	2	YEVNPNLINQFENK2	2200.3	4084.45	
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	YEVNVGSSAAK	YEVNVGSSAAK	2	YEVNVGSSAAK2	90310.3	78955.4	76218.5
D3ZTX4	D3ZTX4	D3ZTX4_RAT	Mgam	Maltase-glucoamylase	1	YEVPVPLNIPR	YEVPVPLNIPR	2	YEVPVPLNIPR2	9767.76		5081.96
F1MA46	F1MA46	F1MA46_RAT	Pcdh12	Protocadherin 12	1	YEVSTWENNPPSLHLITLK	YEVSTWENNPPSLHLITLK	3	YEVSTWENNPPSLHLITLK3	33162.3	38911	30379.5
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	YEVSVYALK	YEVSVYALK	2	YEVSVYALK2	2.03336e+06	2.50873e+06	1.62085e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	YEVSVYALKDTLTSR	YEVSVYALKDTLTSR	2	YEVSVYALKDTLTSR2	8926.49	15062.7	18779.6
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	YEVSVYALKDTLTSR	YEVSVYALKDTLTSR	3	YEVSVYALKDTLTSR3	151260	196912	127155
D3ZWA8	D3ZWA8	D3ZWA8_RAT	Appl1	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1	1	YEVTEDVYTSR	YEVTEDVYTSR	2	YEVTEDVYTSR2	3384.96	4223.7	10757.2
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	YEVTTIHNLFR	YEVTTIHNLFR	2	YEVTTIHNLFR2	3.9287e+06	3.71918e+06	3.36517e+06
Q64268	Q64268	HEP2_RAT	Serpind1	Heparin cofactor 2	1	YEVTTIHNLFR	YEVTTIHNLFR	3	YEVTTIHNLFR3	26480	18815.2	1.62286e+07
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	YEVTVVSVR	YEVTVVSVR	2	YEVTVVSVR2	208779	261172	223208
P21139	P21139	MA2C1_RAT	Man2c1	Alpha-mannosidase 2C1	1	YEVWAHR	YEVWAHR	2	YEVWAHR2	11357	5559.41	6393.34
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	YEWDVAEAR	YEWDVAEAR	2	YEWDVAEAR2	99147.5	89559.9	93118
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	YEWIGQLMGAALR	YEWIGQLMGAALR	2	YEWIGQLMGAALR2	25742	37781.9	22176.8
F1LVZ9	F1LVZ9	F1LVZ9_RAT	Hectd3	HECT domain E3 ubiquitin protein ligase 3	1	YEWIGQLMGAALR	YEWIGQLMGAALR	3	YEWIGQLMGAALR3	2476.42	6991.04	9207
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	YEYCNIPECEEECMYCSGEK	YEYC(UniMod:4)NIPEC(UniMod:4)EEEC(UniMod:4)MYC(UniMod:4)SGEK	3	YEYC(UniMod:4)NIPEC(UniMod:4)EEEC(UniMod:4)MYC(UniMod:4)SGEK3	68986.7	46999.5	48910.6
D3ZAI6	D3ZAI6	D3ZAI6_RAT	Nt5dc3	5'-nucleotidase domain containing 3	1	YEYDPNFAIR	YEYDPNFAIR	2	YEYDPNFAIR2	5802.03	9495.34	10111.3
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	YEYFEVGDHWAR	YEYFEVGDHWAR	2	YEYFEVGDHWAR2	5295.43	7986.06	3685.64
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	YEYFEVGDHWAR	YEYFEVGDHWAR	3	YEYFEVGDHWAR3	41516.2	31129.2	50254
P09811	P09811	PYGL_RAT	Pygl	Glycogen phosphorylase, liver form	1	YEYGIFNQK	YEYGIFNQK	2	YEYGIFNQK2	84124.6	72493.2	78222.5
A0A8I6AGG9	A0A8I6AGG9	A0A8I6AGG9_RAT	Chchd3	Coiled-coil-helix-coiled-coil-helix domain containing 3	1	YEYHPVCADLQTK	YEYHPVC(UniMod:4)ADLQTK	2	YEYHPVC(UniMod:4)ADLQTK2	8613.6	3648.06	9420.75
A0A8I6AGG9	A0A8I6AGG9	A0A8I6AGG9_RAT	Chchd3	Coiled-coil-helix-coiled-coil-helix domain containing 3	1	YEYHPVCADLQTK	YEYHPVC(UniMod:4)ADLQTK	3	YEYHPVC(UniMod:4)ADLQTK3	55547.4	51938.8	69519.6
Q3T1J9	Q3T1J9;A0A8I6AAQ1;A0A8I5ZK61	MOB1A_RAT	Mob1a	MOB kinase activator 1A	0	YEYHWADGTNIK	YEYHWADGTNIK	2	YEYHWADGTNIK2	7733.61	9429.64	2189.52
Q3T1J9	Q3T1J9;A0A8I6AAQ1;A0A8I5ZK61	MOB1A_RAT	Mob1a	MOB kinase activator 1A	0	YEYHWADGTNIK	YEYHWADGTNIK	3	YEYHWADGTNIK3	42321	62604.4	61515.8
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	YEYQPFAGK	YEYQPFAGK	2	YEYQPFAGK2	510774	525380	572740
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	YFADDTQTALTK	YFADDTQTALTK	2	YFADDTQTALTK2	50265.4	61631.2	52862.5
Q4V8I7	Q4V8I7	LRC8A_RAT	Lrrc8a	Volume-regulated anion channel subunit LRRC8A	1	YFADTQPAYR	YFADTQPAYR	2	YFADTQPAYR2	14949	12978.6	13405.6
Q05962	A0A8I5Y643;Q05962;Q09073	ADT1_RAT	Slc25a4	ADP/ATP translocase 1	0	YFAGNLASGGAAGATSLCFVYPLDFAR	YFAGNLASGGAAGATSLC(UniMod:4)FVYPLDFAR	3	YFAGNLASGGAAGATSLC(UniMod:4)FVYPLDFAR3	235442	212730	255842
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	YFAHIIK	YFAHIIK	2	YFAHIIK2	23856	16978.9	26122
Q5XIE8	Q5XIE8	ITM2B_RAT	Itm2b	Integral membrane protein 2B	1	YFALQPDDVYYCGLK	YFALQPDDVYYC(UniMod:4)GLK	2	YFALQPDDVYYC(UniMod:4)GLK2	13270.7	13752.4	14396
F1M4I4	F1M4I4	F1M4I4_RAT	Vps51	Vacuolar protein sorting-associated protein 51 homolog	1	YFALVER	YFALVER	2	YFALVER2	55145.8	69386.6	65519.6
B0BNG0	B0BNG0	EMC2_RAT	Emc2	ER membrane protein complex subunit 2	1	YFAQALK	YFAQALK	2	YFAQALK2	88512.9	85921.4	99763.9
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	YFAQPVMK	YFAQPVMK	2	YFAQPVMK2	6849.48	3425.5	4785.7
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	YFASIHPSSTK	YFASIHPSSTK	2	YFASIHPSSTK2	1675.93	8845.2	4692.82
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	YFASIHPSSTK	YFASIHPSSTK	3	YFASIHPSSTK3	76176.5	75241.9	71268.5
D3ZRJ7	D3ZRJ7	D3ZRJ7_RAT	Lrrk1	non-specific serine/threonine protein kinase	1	YFCGDPSPLR	YFC(UniMod:4)GDPSPLR	2	YFC(UniMod:4)GDPSPLR2	2038.56	5979.45	3683.67
Q499Q1	Q499Q1	Q499Q1_RAT	Rnf126	RING-type E3 ubiquitin transferase	1	YFCHCCSVEIVPR	YFC(UniMod:4)HC(UniMod:4)C(UniMod:4)SVEIVPR	3	YFC(UniMod:4)HC(UniMod:4)C(UniMod:4)SVEIVPR3	6911.14	8228.17	9062.46
Q5FVM7	Q5FVM7	DJC16_RAT	Dnajc16	DnaJ homolog subfamily C member 16	1	YFCLFKPLK	YFC(UniMod:4)LFKPLK	3	YFC(UniMod:4)LFKPLK3	6886.01	5979.2	5569.71
A0A0G2K687	A0A0G2K687	A0A0G2K687_RAT	Rubcn	Rubicon autophagy regulator	1	YFCQCCHENAQMTVPSR	YFC(UniMod:4)QC(UniMod:4)C(UniMod:4)HENAQMTVPSR	3	YFC(UniMod:4)QC(UniMod:4)C(UniMod:4)HENAQMTVPSR3	2225.66	4610.49	1618.76
Q6AYP5	Q6AYP5	CADM1_RAT	Cadm1	Cell adhesion molecule 1	1	YFCQLYTDPPQESYTTITVLVPPR	YFC(UniMod:4)QLYTDPPQESYTTITVLVPPR	3	YFC(UniMod:4)QLYTDPPQESYTTITVLVPPR3	14081.2	10806.3	9165.52
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	YFDEISQDTGK	YFDEISQDTGK	2	YFDEISQDTGK2	234957	251502	256628
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	YFDENAAEDFEK	YFDENAAEDFEK	2	YFDENAAEDFEK2	32521.9	31225.4	38102.8
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	YFDGNLEK	YFDGNLEK	2	YFDGNLEK2	198210	194728	211029
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	YFDGSGGNNHAVEHYR	YFDGSGGNNHAVEHYR	2	YFDGSGGNNHAVEHYR2	4209.86	10884.4	7512.01
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	YFDGSGGNNHAVEHYR	YFDGSGGNNHAVEHYR	3	YFDGSGGNNHAVEHYR3	171666	104913	155525
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	YFDGSGGNNHAVEHYR	YFDGSGGNNHAVEHYR	4	YFDGSGGNNHAVEHYR4	137197	171481	112417
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	YFDHALTLR	YFDHALTLR	2	YFDHALTLR2	1088.25		
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	YFDLGLPNR	YFDLGLPNR	2	YFDLGLPNR2	194048	198506	207754
P56574	P56574	IDHP_RAT	Idh2	Isocitrate dehydrogenase [NADP], mitochondrial	1	YFDLGLPNRDQTNDQVTIDSALATQK	YFDLGLPNRDQTNDQVTIDSALATQK	3	YFDLGLPNRDQTNDQVTIDSALATQK3	18279.3	15574	16940.1
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	YFDLTPSMAGIMVPPVQR	YFDLTPSMAGIMVPPVQR	3	YFDLTPSMAGIMVPPVQR3	98544.5	120388	113881
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	YFDPANGK	YFDPANGK	2	YFDPANGK2	100929	105692	101186
P15384	P63142;P10499;P15384	KCNA3_RAT	Kcna3	Potassium voltage-gated channel subfamily A member 3	0	YFDPLRNEYFFDR	YFDPLRNEYFFDR	2	YFDPLRNEYFFDR2	16150.9	22171.7	20278.6
P15384	P63142;P10499;P15384	KCNA3_RAT	Kcna3	Potassium voltage-gated channel subfamily A member 3	0	YFDPLRNEYFFDR	YFDPLRNEYFFDR	3	YFDPLRNEYFFDR3	193846	256775	301109
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	YFDRVDENNPEYLR	YFDRVDENNPEYLR	2	YFDRVDENNPEYLR2	3758.16	5047.38	4431.2
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	YFDRVDENNPEYLR	YFDRVDENNPEYLR	3	YFDRVDENNPEYLR3	265318	343837	331247
P02091	P02091	HBB1_RAT	Hbb	Hemoglobin subunit beta-1	1	YFDSFGDLSSASAIMGNPK	YFDSFGDLSSASAIMGNPK	3	YFDSFGDLSSASAIMGNPK3	184875	183114	196968
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	YFDSNKDAYSK	YFDSNKDAYSK	3	YFDSNKDAYSK3	7915.02	15730.5	9146.75
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	YFDSVQAK	YFDSVQAK	2	YFDSVQAK2	29965.3	30943.3	20230
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	YFDTLMK	YFDTLMK	2	YFDTLMK2	146373	169565	169080
D4ACN6	D4ACN6	D4ACN6_RAT	Cert1	Ceramide transfer protein	1	YFDVCADAVSK	YFDVC(UniMod:4)ADAVSK	2	YFDVC(UniMod:4)ADAVSK2	58420.7	52107.8	56134.6
D3ZIK0	D3ZIK0	D3ZIK0_RAT	Glce	heparosan-N-sulfate-glucuronate 5-epimerase	1	YFDVYGK	YFDVYGK	2	YFDVYGK2	8205.9		6964.07
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	YFDWILISR	YFDWILISR	2	YFDWILISR2	197563	204554	215634
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	YFEAVQLSSQQR	YFEAVQLSSQQR	2	YFEAVQLSSQQR2	7938.4	8046.53	4087.72
O35820	O35820	DNPH1_RAT	Dnph1	2'-deoxynucleoside 5'-phosphate N-hydrolase 1	1	YFEAYLPQK	YFEAYLPQK	2	YFEAYLPQK2	7382.58	2329.2	
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	YFECPALQGIFTR	YFEC(UniMod:4)PALQGIFTR	2	YFEC(UniMod:4)PALQGIFTR2	68451	69172.5	67298.3
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	YFECPALQGIFTR	YFEC(UniMod:4)PALQGIFTR	3	YFEC(UniMod:4)PALQGIFTR3	5666.56	4195.44	5295.48
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	YFECPALQGIFTRPSK	YFEC(UniMod:4)PALQGIFTRPSK	2	YFEC(UniMod:4)PALQGIFTRPSK2	6043.8	6406.29	4846.32
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	YFECPALQGIFTRPSK	YFEC(UniMod:4)PALQGIFTRPSK	3	YFEC(UniMod:4)PALQGIFTRPSK3	80040	68643.9	76069.7
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	YFEFTVMGR	YFEFTVMGR	2	YFEFTVMGR2	200759	191478	187803
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	YFEIQFSPGGEPDGGK	YFEIQFSPGGEPDGGK	2	YFEIQFSPGGEPDGGK2	31745.8	19324.7	24840.6
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	YFEIQFSPGGEPDGGK	YFEIQFSPGGEPDGGK	3	YFEIQFSPGGEPDGGK3	10139.5	8172.67	5501.42
M0R8J3	M0R8J3	M0R8J3_RAT	Jmy	Junction mediating and regulatory protein, p53 cofactor	1	YFEITAK	YFEITAK	2	YFEITAK2		9782.22	7194.25
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	YFEITDEPPYIHFLNTFTSK	YFEITDEPPYIHFLNTFTSK	3	YFEITDEPPYIHFLNTFTSK3	534423	489507	515296
O89046	O89046	COR1B_RAT	Coro1b	Coronin-1B	1	YFEITDEPPYIHFLNTFTSKEPQR	YFEITDEPPYIHFLNTFTSKEPQR	4	YFEITDEPPYIHFLNTFTSKEPQR4	27631.5	29508.1	19690.9
A0A8I6ANC4	A0A8I6ANC4	A0A8I6ANC4_RAT	Coro1c	Coronin	1	YFEITDESPYVHYLNTFSSK	YFEITDESPYVHYLNTFSSK	3	YFEITDESPYVHYLNTFSSK3	280675	285681	275188
Q91ZN1	Q91ZN1	COR1A_RAT	Coro1a	Coronin-1A	1	YFEITSEAPFLHYLSMFSSK	YFEITSEAPFLHYLSMFSSK	3	YFEITSEAPFLHYLSMFSSK3	143121	93558.6	101934
F1M6C4	F1M6C4	F1M6C4_RAT	Arl15	ADP-ribosylation factor like GTPase 15	1	YFELEPLAR	YFELEPLAR	2	YFELEPLAR2	18023	24809.8	18981.9
P00406	P00406	COX2_RAT	Mtco2	Cytochrome c oxidase subunit 2	1	YFENWSASMI	YFENWSASMI	2	YFENWSASMI2	16052	11356.1	13974.9
Q5XI07	Q5XI07	LPP_RAT	Lpp	Lipoma-preferred partner homolog	1	YFEPFFAACPSYGGR	YFEPFFAAC(UniMod:4)PSYGGR	2	YFEPFFAAC(UniMod:4)PSYGGR2	19948.1	23873.4	26559.2
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	YFESDHPGPGSYSSNR	YFESDHPGPGSYSSNR	3	YFESDHPGPGSYSSNR3	28112.8	26250.6	30815.7
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	YFESDHPGPGSYSSNRK	YFESDHPGPGSYSSNRK	4	YFESDHPGPGSYSSNRK4	7560.19	9260.44	3825.64
B2RZ77	B2RZ77	B2RZ77_RAT	Dpt	Dermatopontin	1	YFESVLDR	YFESVLDR	2	YFESVLDR2	784348	707903	876246
B2RZ77	B2RZ77	B2RZ77_RAT	Dpt	Dermatopontin	1	YFESVLDREWQFYCCR	YFESVLDREWQFYC(UniMod:4)C(UniMod:4)R	3	YFESVLDREWQFYC(UniMod:4)C(UniMod:4)R3	1.05321e+06	1.04516e+06	1.04175e+06
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	YFETVSDVLSSVR	YFETVSDVLSSVR	2	YFETVSDVLSSVR2	20110.5	26057.1	20520.2
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	YFETVSDVLSSVR	YFETVSDVLSSVR	3	YFETVSDVLSSVR3		3051.16	779.533
Q6P4Z6	Q6P4Z6	LCMT1_RAT	Lcmt1	Leucine carboxyl methyltransferase 1	1	YFEVDFPMIVTR	YFEVDFPMIVTR	2	YFEVDFPMIVTR2	3143.39	905.779	2957.47
Q3B7D0	Q3B7D0	HEM6_RAT	Cpox	Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial	1	YFEVEEADGK	YFEVEEADGK	2	YFEVEEADGK2	8204	6355.43	10278.9
B0BMV4	B0BMV4	B0BMV4_RAT	Yif1a	Protein YIF1	1	YFFAVDTAYVAK	YFFAVDTAYVAK	2	YFFAVDTAYVAK2	9532.13	7860.16	11464.4
D3ZF12	D3ZF12	D3ZF12_RAT	Spcs3	Signal peptidase complex subunit 3	1	YFFFDDGNGLK	YFFFDDGNGLK	2	YFFFDDGNGLK2	77326.8	55913.8	57121.6
Q6IRK9	Q6IRK9	CBPQ_RAT	Cpq	Carboxypeptidase Q	1	YFFFHHSHGDTMTAMDPK	YFFFHHSHGDTMTAMDPK	4	YFFFHHSHGDTMTAMDPK4	9681.41	9745.75	19687.3
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	YFFNVADEAALLEK	YFFNVADEAALLEK	2	YFFNVADEAALLEK2	217593	212319	215437
A0A0G2K470	A0A0G2K470	A0A0G2K470_RAT	Itga2	Integrin subunit alpha 2	1	YFFNVADEAALLEK	YFFNVADEAALLEK	3	YFFNVADEAALLEK3	4561.77	8177.15	6637.56
P18266	P18266;P18265	GSK3B_RAT	Gsk3b	Glycogen synthase kinase-3 beta	0	YFFYSSGEK	YFFYSSGEK	2	YFFYSSGEK2	18819.2	26723.1	21766
Q07205	Q07205;A0A8I6ADE0	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	0	YFGCELGAQTQFDVK	YFGC(UniMod:4)ELGAQTQFDVK	2	YFGC(UniMod:4)ELGAQTQFDVK2	16163.6	16190.2	12186.9
Q6I7R3	Q6I7R3	ISOC1_RAT	Isoc1	Isochorismatase domain-containing protein 1	1	YFGDIISVGQR	YFGDIISVGQR	2	YFGDIISVGQR2	12844.8	13423.1	
F7F4L4	F7F4L4	F7F4L4_RAT	Dnajb12	DnaJ heat shock protein family (Hsp40) member B12	1	YFGDTDMYHR	YFGDTDMYHR	3	YFGDTDMYHR3	15815.2	7833.44	12078.4
P62489	P62489	RPB7_RAT	Polr2g	DNA-directed RNA polymerase II subunit RPB7	1	YFGPNLLNTVK	YFGPNLLNTVK	2	YFGPNLLNTVK2	7436.81	7478.37	6026.11
Q6V9V9	Q6V9V9	Q6V9V9_RAT	Stk25	Serine/threonine kinase 25	1	YFGSYLK	YFGSYLK	1	YFGSYLK1	75864.1	65879.8	49534.1
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	YFHAQCNFFQDGLK	YFHAQC(UniMod:4)NFFQDGLK	2	YFHAQC(UniMod:4)NFFQDGLK2	4401.75	2346.93	2280.05
A0A8I5ZRL8	A0A8I5ZRL8	A0A8I5ZRL8_RAT	Asap2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	1	YFHAQCNFFQDGLK	YFHAQC(UniMod:4)NFFQDGLK	3	YFHAQC(UniMod:4)NFFQDGLK3	5288.03	7894.3	2154.55
F2Z3T4	F2Z3T4;A0A0G2JX72	MBNL2_RAT	Mbnl2	Muscleblind-like protein 2	0	YFHPPAHLQAK	YFHPPAHLQAK	2	YFHPPAHLQAK2	5181.01		
F2Z3T4	F2Z3T4;A0A0G2JX72	MBNL2_RAT	Mbnl2	Muscleblind-like protein 2	0	YFHPPAHLQAK	YFHPPAHLQAK	3	YFHPPAHLQAK3	10135.2	8129.18	18881.3
P15978	A0A0G2K1E1;P15978	HA11_RAT	RT1-Aw2	Class I histocompatibility antigen, Non-RT1.A alpha-1 chain	0	YFHTAVSR	YFHTAVSR	2	YFHTAVSR2	35533.9	24783.5	24653.5
P15978	A0A0G2K1E1;P15978	HA11_RAT	RT1-Aw2	Class I histocompatibility antigen, Non-RT1.A alpha-1 chain	0	YFHTAVSRPGLGEPR	YFHTAVSRPGLGEPR	3	YFHTAVSRPGLGEPR3	135722	89160.6	75233.2
P15978	A0A0G2K1E1;P15978	HA11_RAT	RT1-Aw2	Class I histocompatibility antigen, Non-RT1.A alpha-1 chain	0	YFHTAVSRPGLGEPR	YFHTAVSRPGLGEPR	4	YFHTAVSRPGLGEPR4	377322	310326	297502
Q9EQX9	Q9EQX9	UBE2N_RAT	Ube2n	Ubiquitin-conjugating enzyme E2 N	1	YFHVVIAGPQDSPFEGGTFK	YFHVVIAGPQDSPFEGGTFK	3	YFHVVIAGPQDSPFEGGTFK3	33920.3	21934.2	22594.4
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	YFILNSSCLR	YFILNSSC(UniMod:4)LR	2	YFILNSSC(UniMod:4)LR2	73934.9	84975	79399.8
Q63803	Q63803	GNAS1_RAT	Gnas	Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas	1	YFIRDEFLR	YFIRDEFLR	2	YFIRDEFLR2		4227.03	8258.01
Q63803	Q63803	GNAS1_RAT	Gnas	Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas	1	YFIRDEFLR	YFIRDEFLR	3	YFIRDEFLR3	259435	289247	216296
Q6AY86	Q6AY86	VP26A_RAT	Vps26a	Vacuolar protein sorting-associated protein 26A	1	YFKQQEIILWR	YFKQQEIILWR	3	YFKQQEIILWR3	21203.6	18454.9	16294.2
Q6Q7Y5	Q6Q7Y5	GNA13_RAT	Gna13	Guanine nucleotide-binding protein subunit alpha-13	1	YFLDNLDK	YFLDNLDK	2	YFLDNLDK2	133888	140180	161527
Q9WTQ0	Q9WTQ0	KPCT_RAT	Prkcq	Protein kinase C theta type	1	YFLEMSDTK	YFLEMSDTK	2	YFLEMSDTK2	106734	102615	113948
Q3L7M0	Q3L7M0	GGTA1_RAT	Ggta1	N-acetyllactosaminide alpha-1,3-galactosyltransferase	1	YFLFNKPTK	YFLFNKPTK	3	YFLFNKPTK3	26371.6	25790.3	26294.5
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	YFLGTPVLEPAFIIQHFAGR	YFLGTPVLEPAFIIQHFAGR	3	YFLGTPVLEPAFIIQHFAGR3	3362.26	3729.83	5584.99
P19132	A0A8I5ZU81;P19132	FRIH_RAT	Fth1	Ferritin heavy chain	0	YFLHQSHEER	YFLHQSHEER	2	YFLHQSHEER2	3905.65		
P19132	A0A8I5ZU81;P19132	FRIH_RAT	Fth1	Ferritin heavy chain	0	YFLHQSHEER	YFLHQSHEER	3	YFLHQSHEER3	33909	7781.4	6477.2
Q68HB8	Q68HB8	Q68HB8_RAT	Pcdh7	Protocadherin 7	1	YFLHTSAPLDYETTR	YFLHTSAPLDYETTR	3	YFLHTSAPLDYETTR3	12314.3	14629.5	10287.1
D3ZDR7	D3ZDR7	D3ZDR7_RAT	Themis2	Thymocyte selection associated family member 2	1	YFLLSGAYQGK	YFLLSGAYQGK	2	YFLLSGAYQGK2	16732.3	11973.8	
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	YFLNFDPGTSIR	YFLNFDPGTSIR	2	YFLNFDPGTSIR2	31126.2	26552.7	161122
Q6AY86	Q6AY86	VP26A_RAT	Vps26a	Vacuolar protein sorting-associated protein 26A	1	YFLNLVLVDEEDRR	YFLNLVLVDEEDRR	3	YFLNLVLVDEEDRR3	23623.4	27710.2	16966.3
Q7TSU1	D4A631;Q7TSU1	BIG2_RAT	Arfgef2	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	0	YFLPFELACQSK	YFLPFELAC(UniMod:4)QSK	2	YFLPFELAC(UniMod:4)QSK2	41578.2	51688.6	54979.9
O54975	O54975	XPP1_RAT	Xpnpep1	Xaa-Pro aminopeptidase 1	1	YFLQAAK	YFLQAAK	2	YFLQAAK2	120583	107514	97688
A0A8I5ZTX1	A0A8I5ZTX1	A0A8I5ZTX1_RAT	Plekha2	Pleckstrin homology domain containing A2	1	YFLQANDQK	YFLQANDQK	2	YFLQANDQK2	94448.9	65968.7	80629.5
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	YFLQATHVQPDDIGAHMNVGR	YFLQATHVQPDDIGAHMNVGR	3	YFLQATHVQPDDIGAHMNVGR3	2369.98		
D3ZUJ8	D3ZUJ8	D3ZUJ8_RAT	Tmtc3	dolichyl-phosphate-mannose--protein mannosyltransferase	1	YFLQATHVQPDDIGAHMNVGR	YFLQATHVQPDDIGAHMNVGR	4	YFLQATHVQPDDIGAHMNVGR4	12417	24209.4	18893.8
Q6AYR2	A0A8I6ASR6;Q6AYR2	NDRG3_RAT	Ndrg3	Protein NDRG3	0	YFLQGMGYIPSASMTR	YFLQGMGYIPSASMTR	2	YFLQGMGYIPSASMTR2	18225.6	7763.57	10810.2
B2GV54	B2GV54	NCEH1_RAT	Nceh1	Neutral cholesterol ester hydrolase 1	1	YFLQPEVLDK	YFLQPEVLDK	2	YFLQPEVLDK2	93120.6	95560.5	98268.3
B2GV54	B2GV54	NCEH1_RAT	Nceh1	Neutral cholesterol ester hydrolase 1	1	YFLQPEVLDKYK	YFLQPEVLDKYK	2	YFLQPEVLDKYK2	12639.9	12380.6	19852.5
B2GV54	B2GV54	NCEH1_RAT	Nceh1	Neutral cholesterol ester hydrolase 1	1	YFLQPEVLDKYK	YFLQPEVLDKYK	3	YFLQPEVLDKYK3	56810.1	68473.4	63761.8
A0A0G2K6T9	A0A0G2K6T9	A0A0G2K6T9_RAT	Pcdh1	Protocadherin 1	1	YFLQTTTPLDYEK	YFLQTTTPLDYEK	2	YFLQTTTPLDYEK2	13435.6	11552.5	12069.9
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	YFLSGSLDGK	YFLSGSLDGK	2	YFLSGSLDGK2	134865	124544	138422
Q62689	Q62689	JAK2_RAT	Jak2	Tyrosine-protein kinase JAK2	1	YFLTFAVER	YFLTFAVER	2	YFLTFAVER2	64169.9	59471.3	61220.1
Q5U300	Q5U300;A0A8I5ZVX0;A0A8I6A544	UBA1_RAT	Uba1	Ubiquitin-like modifier-activating enzyme 1	0	YFLVGAGAIGCELLK	YFLVGAGAIGC(UniMod:4)ELLK	2	YFLVGAGAIGC(UniMod:4)ELLK2	110235	81208.4	84468.9
Q0Z843	Q0Z843	Q0Z843_RAT	Fig4	FIG4 phosphoinositide 5-phosphatase	1	YFLVGSNHAETK	YFLVGSNHAETK	3	YFLVGSNHAETK3	5306.55	10435.7	5352.68
P62994	P62994	GRB2_RAT	Grb2	Growth factor receptor-bound protein 2	1	YFLWVVK	YFLWVVK	2	YFLWVVK2	87466.4	86610.3	94465.4
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	YFMAPLK	YFMAPLK	2	YFMAPLK2	90155.9	90489	98255.4
A0A0G2QC40	A0A0G2QC40	A0A0G2QC40_RAT	Mkrn1	RING-type E3 ubiquitin transferase	1	YFMHGVCK	YFMHGVC(UniMod:4)K	2	YFMHGVC(UniMod:4)K2	8218.99	2099.41	4846.98
A0A8I6ALB6	A0A8I6ALB6	A0A8I6ALB6_RAT	Tbc1d2b	TBC1 domain family, member 2B	1	YFMSHQISQGVPR	YFMSHQISQGVPR	3	YFMSHQISQGVPR3		3103.05	
P08661	P08661;Q7TMC0	MBL2_RAT	Mbl2	Mannose-binding protein C	0	YFMSSVR	YFMSSVR	2	YFMSSVR2	245420	213719	230710
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	YFNEFLDGELK	YFNEFLDGELK	2	YFNEFLDGELK2			9856.87
D4AEK9	D4AEK9	D4AEK9_RAT	Ccdc6	Coiled-coil domain containing 6	1	YFNEMSAQGLRPR	YFNEMSAQGLRPR	3	YFNEMSAQGLRPR3	103612	113113	96837.6
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	YFNIPGSR	YFNIPGSR	2	YFNIPGSR2	184948	195512	174233
Q5U2V5	Q5U2V5	CRLS1_RAT	Crls1	Cardiolipin synthase (CMP-forming)	1	YFNPCYATAR	YFNPC(UniMod:4)YATAR	2	YFNPC(UniMod:4)YATAR2	6832.56	14803.5	7645.92
F1LWD1	F1LWD1	F1LWD1_RAT	Igh-6-ps1	Ig-like domain-containing protein	1	YFNPSLNSR	YFNPSLNSR	2	YFNPSLNSR2	128744	99981.6	118122
Q9JJW3	Q9JJW3;A0A8L2QV13	ATPMK_RAT	Atp5mk	ATP synthase membrane subunit K, mitochondrial	0	YFNSYTLTGR	YFNSYTLTGR	2	YFNSYTLTGR2	276571	268771	274449
A0A8I5ZJ62	A0A8I5ZJ62	A0A8I5ZJ62_RAT	Glipr2	GLI pathogenesis-related 2	1	YFPAGNIVNQGFFEENVPPPK	YFPAGNIVNQGFFEENVPPPK	3	YFPAGNIVNQGFFEENVPPPK3	20462		21613.2
A0A8I5ZJ62	A0A8I5ZJ62	A0A8I5ZJ62_RAT	Glipr2	GLI pathogenesis-related 2	1	YFPAGNIVNQGFFEENVPPPKK	YFPAGNIVNQGFFEENVPPPKK	3	YFPAGNIVNQGFFEENVPPPKK3	68512.2	85756.9	77438.6
P97943	P97943	SCRB1_RAT	Scarb1	Scavenger receptor class B member 1	1	YFPDMFPIK	YFPDMFPIK	2	YFPDMFPIK2	32124.6	35380.1	33624.7
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	YFPETWIWDMVPLDLSGDGELPVK	YFPETWIWDMVPLDLSGDGELPVK	3	YFPETWIWDMVPLDLSGDGELPVK3		4728.68	2931.22
Q66H69	Q66H69	B3GN7_RAT	B3gnt7	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7	1	YFPMLLNHPEK	YFPMLLNHPEK	3	YFPMLLNHPEK3	3465.82		3654.9
Q05962	A0A8I5Y643;A0A8I6A075;A0A8I6G2T3;Q05962;A0A8I6A2W7;D3ZB81;A0A8I6GK78;Q09073	ADT1_RAT	Slc25a4	ADP/ATP translocase 1	0	YFPTQALNFAFK	YFPTQALNFAFK	2	YFPTQALNFAFK2	1.11005e+06	1.57429e+06	1.47363e+06
Q05962	A0A8I5Y643;A0A8I6A075;A0A8I6G2T3;Q05962;A0A8I6A2W7;D3ZB81;A0A8I6GK78;Q09073	ADT1_RAT	Slc25a4	ADP/ATP translocase 1	0	YFPTQALNFAFK	YFPTQALNFAFK	3	YFPTQALNFAFK3	6656.37	10500.4	10538.5
B2RYF7	B2RYF7	WASH1_RAT	Washc1	WASH complex subunit 1	1	YFPVCVSTK	YFPVC(UniMod:4)VSTK	2	YFPVC(UniMod:4)VSTK2	57145.8	51755.9	52629.1
Q63377	Q63377	AT1B3_RAT	Atp1b3	Sodium/potassium-transporting ATPase subunit beta-3	1	YFPYYGK	YFPYYGK	2	YFPYYGK2	112166	127150	124029
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	YFQCPPK	YFQC(UniMod:4)PPK	2	YFQC(UniMod:4)PPK2	90940.9	115211	135621
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	YFQDVEK	YFQDVEK	2	YFQDVEK2	163005	206413	184038
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	YFQEACDVHEPEEK	YFQEAC(UniMod:4)DVHEPEEK	2	YFQEAC(UniMod:4)DVHEPEEK2	2705.78		
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	YFQEACDVHEPEEK	YFQEAC(UniMod:4)DVHEPEEK	3	YFQEAC(UniMod:4)DVHEPEEK3	7373.91	13774.9	23383.7
P85970	P85970	ARPC2_RAT	Arpc2	Actin-related protein 2/3 complex subunit 2	1	YFQFQEEGK	YFQFQEEGK	2	YFQFQEEGK2	418772	437210	475066
B5DFI9	B5DFI9	B5DFI9_RAT	Pdk3	Protein-serine/threonine kinase	1	YFQGDLK	YFQGDLK	2	YFQGDLK2	21959.7	15230.8	20279
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	YFQHLLGK	YFQHLLGK	2	YFQHLLGK2	167609	152362	135713
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	YFQISLEAEK	YFQISLEAEK	2	YFQISLEAEK2	24702.7	27196.8	31269.2
Q6MG06	Q6MG06	GNL1_RAT	Gnl1	Guanine nucleotide-binding protein-like 1	1	YFQTYFLTPSVK	YFQTYFLTPSVK	2	YFQTYFLTPSVK2	18604	13733.1	10576.2
O08774	O08774	RGS12_RAT	Rgs12	Regulator of G-protein signaling 12	1	YFSDFLR	YFSDFLR	2	YFSDFLR2	8897.69	3262.72	
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	YFSEADKIK	YFSEADKIK	2	YFSEADKIK2	17441.7	12732.5	5108.22
F1M8V2	F1M8V2	F1M8V2_RAT	Ube4b	Ubiquitin conjugation factor E4	1	YFSGPAITLENTR	YFSGPAITLENTR	2	YFSGPAITLENTR2	19302.7	12885.4	8251.29
B5DEZ6	B5DEZ6	B5DEZ6_RAT	Gnpda2	Glucosamine-6-phosphate isomerase	1	YFSLGLPTGSTPLGCYK	YFSLGLPTGSTPLGC(UniMod:4)YK	2	YFSLGLPTGSTPLGC(UniMod:4)YK2	3222.98		
A0A8I6A822	A0A8I6A822	A0A8I6A822_RAT	Tm9sf3	Transmembrane 9 superfamily member	1	YFSLPFCVGSK	YFSLPFC(UniMod:4)VGSK	2	YFSLPFC(UniMod:4)VGSK2	224049	233420	284356
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	YFSLQATHPLGFDDVVR	YFSLQATHPLGFDDVVR	3	YFSLQATHPLGFDDVVR3	28541	18743.6	25362.3
A1KQY6	A1KQY6	A1KQY6_RAT	St8sia4	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	1	YFSNASPHR	YFSNASPHR	2	YFSNASPHR2	4581.31	7591.64	7105.84
O54857	O54857	PTEN_RAT	Pten	Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN	1	YFSPNFK	YFSPNFK	2	YFSPNFK2	81243.9	93998.8	75227.1
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	YFSSENMDGSNPALNVLQR	YFSSENMDGSNPALNVLQR	3	YFSSENMDGSNPALNVLQR3	1768.71	5518.49	3057.54
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	YFSYDCGADFPGIPLAPPR	YFSYDC(UniMod:4)GADFPGIPLAPPR	3	YFSYDC(UniMod:4)GADFPGIPLAPPR3	12209.5	9491.59	12103.9
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	YFTCDEGHGIFVR	YFTC(UniMod:4)DEGHGIFVR	2	YFTC(UniMod:4)DEGHGIFVR2	5358.09	7984.32	7310.62
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	YFTCDEGHGIFVR	YFTC(UniMod:4)DEGHGIFVR	3	YFTC(UniMod:4)DEGHGIFVR3	189582	197853	197248
Q9WTT7	Q9WTT7	5MP1_RAT	Bzw2	eIF5-mimic protein 1	1	YFTDAGLK	YFTDAGLK	2	YFTDAGLK2	101947	67321.3	70989.7
Q8R4C0	Q8R4C0	CAN5_RAT	Capn5	Calpain-5	1	YFTDIIK	YFTDIIK	2	YFTDIIK2	122122	114962	136458
Q6P7P5	Q6P7P5	5MP2_RAT	Bzw1	eIF5-mimic protein 2	1	YFTEAGLK	YFTEAGLK	2	YFTEAGLK2	336944	406439	321660
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	YFTHVMVNK	YFTHVMVNK	2	YFTHVMVNK2	1929.86	3956.01	1446.09
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	YFTPVTK	YFTPVTK	2	YFTPVTK2	39075.6	33895.7	28727.8
Q3B8P0	Q3B8P0	PARL_RAT	Parl	Presenilin-associated rhomboid-like protein, mitochondrial	1	YFTSNPASK	YFTSNPASK	2	YFTSNPASK2	20194.4	17314.3	19493.3
D3ZBT4	D3ZBT4	D3ZBT4_RAT	Mtf1	Metal-regulatory transcription factor 1	1	YFTTLSDLRK	YFTTLSDLRK	3	YFTTLSDLRK3	7482.08	20848.8	19476.6
A0A8I5Y674	A0A8I5Y674	A0A8I5Y674_RAT	Gapvd1	GTPase activating protein and VPS9 domains 1	1	YFTTVCVR	YFTTVC(UniMod:4)VR	2	YFTTVC(UniMod:4)VR2	87351	96574.9	82092.4
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	YFTVQVR	YFTVQVR	2	YFTVQVR2	13216.5	11181.4	18158.3
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	YFTWDPTR	YFTWDPTR	2	YFTWDPTR2	372204	325344	370795
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	YFTWDPTRFPQPLNMLEHLASK	YFTWDPTRFPQPLNMLEHLASK	3	YFTWDPTRFPQPLNMLEHLASK3	27131.6	23347.6	32035.5
D3ZAN3	D3ZAN3	D3ZAN3_RAT	Ganab	Glucosidase II alpha subunit	1	YFTWDPTRFPQPLNMLEHLASK	YFTWDPTRFPQPLNMLEHLASK	4	YFTWDPTRFPQPLNMLEHLASK4	45135.8	51061.5	50211.7
Q920R3	Q920R3	FADS1_RAT	Fads1	Acyl-CoA (8-3)-desaturase	1	YFTWEEVAQR	YFTWEEVAQR	2	YFTWEEVAQR2	3120.88		5916.6
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	YFVAPAK	YFVAPAK	1	YFVAPAK1	10712.7	8100.03	5457.88
F1MAA7	F1MAA7	F1MAA7_RAT	Lamc1	Laminin subunit gamma 1	1	YFVAPAK	YFVAPAK	2	YFVAPAK2	292549	338580	299917
B4F767	B4F767;F7FIK1	B4F767_RAT	Wwp2	E3 ubiquitin-protein ligase	0	YFVDHNTR	YFVDHNTR	2	YFVDHNTR2	5687.4	7556.16	
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	YFVEAGAMAVR	YFVEAGAMAVR	2	YFVEAGAMAVR2	267544	294825	290720
P20291	P20291	AL5AP_RAT	Alox5ap	Arachidonate 5-lipoxygenase-activating protein	1	YFVGYLGER	YFVGYLGER	2	YFVGYLGER2	24670.2	30000.3	34832
B1WC61	B1WC61	ACAD9_RAT	Acad9	Complex I assembly factor ACAD9, mitochondrial	1	YFVLNGSK	YFVLNGSK	2	YFVLNGSK2	13568.2	10300.3	10392.7
P14925	P14925	AMD_RAT	Pam	Peptidylglycine alpha-amidating monooxygenase	1	YFVLQVHYGDISAFR	YFVLQVHYGDISAFR	3	YFVLQVHYGDISAFR3	10979.4	21971.6	13552.1
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	YFVLYKPPPK	YFVLYKPPPK	3	YFVLYKPPPK3	19458.3	30971.7	22999.8
A0A8I6ANY1	A0A8I6ANY1	A0A8I6ANY1_RAT	Ascc2	Activating signal cointegrator 1 complex subunit 2	1	YFVLYKPPPKDNIPALVEEYLER	YFVLYKPPPKDNIPALVEEYLER	4	YFVLYKPPPKDNIPALVEEYLER4	8720.9	14529.5	4229.49
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	YFVMNLIEDFK	YFVMNLIEDFK	2	YFVMNLIEDFK2	34761.5	21058	32433.7
Q923V4	Q923V4	FBX6_RAT	Fbxo6	F-box only protein 6	1	YFVTSYGMCLK	YFVTSYGMC(UniMod:4)LK	2	YFVTSYGMC(UniMod:4)LK2	70352.4	72361.1	78105.4
Q68FY0	Q68FY0	QCR1_RAT	Uqcrc1	Cytochrome b-c1 complex subunit 1, mitochondrial	1	YFYDQCPAVAGYGPIEQLSDYNR	YFYDQC(UniMod:4)PAVAGYGPIEQLSDYNR	3	YFYDQC(UniMod:4)PAVAGYGPIEQLSDYNR3	56454.5	43756.2	62646.5
Q02445	Q02445	TFPI1_RAT	Tfpi	Tissue factor pathway inhibitor	1	YFYNNQSK	YFYNNQSK	2	YFYNNQSK2	150676	168467	156643
A4V8B4	A4V8B4	SAV1_RAT	Sav1	Protein salvador homolog 1	1	YFYSDNFFDGQR	YFYSDNFFDGQR	2	YFYSDNFFDGQR2	29314.3	29196.7	35561.3
Q9Z1A5	Q9Z1A5	ULA1_RAT	Nae1	NEDD8-activating enzyme E1 regulatory subunit	1	YGAAEPHTVAAFLGGAAAQEVIK	YGAAEPHTVAAFLGGAAAQEVIK	3	YGAAEPHTVAAFLGGAAAQEVIK3	9215.15	2457.65	
Q99372	Q99372	ELN_RAT	Eln	Elastin	1	YGAAGGLVPGGPGVR	YGAAGGLVPGGPGVR	2	YGAAGGLVPGGPGVR2	12852.7	10182.7	
Q99372	Q99372	ELN_RAT	Eln	Elastin	1	YGAAGLGGVLGAR	YGAAGLGGVLGAR	2	YGAAGLGGVLGAR2	5828.33	7259.87	3999
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	YGAAMALGVCCAGTGNK	YGAAMALGVC(UniMod:4)C(UniMod:4)AGTGNK	2	YGAAMALGVC(UniMod:4)C(UniMod:4)AGTGNK2	28121.6	19982	35548.6
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	YGAATANYMEVVSLLK	YGAATANYMEVVSLLK	2	YGAATANYMEVVSLLK2	91694.8	78283.9	95589.9
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	YGAATANYMEVVSLLK	YGAATANYMEVVSLLK	3	YGAATANYMEVVSLLK3	4148.97	7060.62	1781.95
P35571	P35571	GPDM_RAT	Gpd2	Glycerol-3-phosphate dehydrogenase, mitochondrial	1	YGAATANYMEVVSLLKK	YGAATANYMEVVSLLKK	3	YGAATANYMEVVSLLKK3	3197.32	4745.67	
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	YGAATFSK	YGAATFSK	1	YGAATFSK1	2.46651e+06	2.34944e+06	2.29083e+06
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	YGAATFSK	YGAATFSK	2	YGAATFSK2	761402	640885	627398
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	YGAATFSKSQK	YGAATFSKSQK	2	YGAATFSKSQK2	32312.8	19776.5	25293.5
P14046	Q6IE52;A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	YGAATFSKSQK	YGAATFSKSQK	3	YGAATFSKSQK3	70081.8	53369.5	59787.1
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	YGAATFTK	YGAATFTK	1	YGAATFTK1	237665	180408	158097
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	YGAATFTK	YGAATFTK	2	YGAATFTK2	1.8286e+07	1.54837e+07	1.71998e+07
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	YGADALR	YGADALR	2	YGADALR2	117006	85555.1	113193
P24473	P24473	GSTK1_RAT	Gstk1	Glutathione S-transferase kappa 1	1	YGAFGLPTTVAHVDGK	YGAFGLPTTVAHVDGK	2	YGAFGLPTTVAHVDGK2	20406.5	27277.3	22440.5
P24473	P24473	GSTK1_RAT	Gstk1	Glutathione S-transferase kappa 1	1	YGAFGLPTTVAHVDGK	YGAFGLPTTVAHVDGK	3	YGAFGLPTTVAHVDGK3	144774	116712	127487
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	YGAFGVSEDTEK	YGAFGVSEDTEK	2	YGAFGVSEDTEK2	4890.49	14625.8	19540.3
P04182	P04182	OAT_RAT	Oat	Ornithine aminotransferase, mitochondrial	1	YGAHNYHPLPVALER	YGAHNYHPLPVALER	3	YGAHNYHPLPVALER3	19366.8	5416.15	7611.6
P04182	P04182	OAT_RAT	Oat	Ornithine aminotransferase, mitochondrial	1	YGAHNYHPLPVALER	YGAHNYHPLPVALER	4	YGAHNYHPLPVALER4	20320	8475.28	13498.7
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	YGALCDESK	YGALC(UniMod:4)DESK	2	YGALC(UniMod:4)DESK2	9213.09	13326	8706.73
O08836	O08836	IGBP1_RAT	Igbp1	Immunoglobulin-binding protein 1	1	YGALPDR	YGALPDR	2	YGALPDR2	11315	12431.7	
Q9QYU2	Q9QYU2	EFTS_RAT	Tsfm	Elongation factor Ts, mitochondrial	1	YGALVICQTPEQITNLEEVGRR	YGALVIC(UniMod:4)QTPEQITNLEEVGRR	3	YGALVIC(UniMod:4)QTPEQITNLEEVGRR3	14553.2	17510.8	11394.8
Q63175	Q63175	SERC5_RAT	Serinc5	Serine incorporator 5	1	YGAPELEVAR	YGAPELEVAR	2	YGAPELEVAR2	67139.8	60464	61513.3
Q5PQR3	Q5PQR3	BTBD9_RAT	Btbd9	BTB/POZ domain-containing protein 9	1	YGAQVVK	YGAQVVK	2	YGAQVVK2	8088.31	8608.41	5930.88
P19511	P19511	AT5F1_RAT	Atp5pb	ATP synthase F(0) complex subunit B1, mitochondrial	1	YGASIGEFIDK	YGASIGEFIDK	2	YGASIGEFIDK2	31896.2	26999.4	39804
P19511	P19511	AT5F1_RAT	Atp5pb	ATP synthase F(0) complex subunit B1, mitochondrial	1	YGASIGEFIDKLNEEK	YGASIGEFIDKLNEEK	3	YGASIGEFIDKLNEEK3	8131.01		2837.58
D3ZFD0	D3ZFD0	MY18A_RAT	Myo18a	Unconventional myosin-XVIIIa	1	YGASLLHTYAGPSLLVLSPR	YGASLLHTYAGPSLLVLSPR	3	YGASLLHTYAGPSLLVLSPR3	21776	14354.8	20876.9
Q5U2Z4	Q5U2Z4	Q5U2Z4_RAT	Nfkb2	Nuclear factor kappa B subunit 2	1	YGCEGPSHGGLPGASSEK	YGC(UniMod:4)EGPSHGGLPGASSEK	3	YGC(UniMod:4)EGPSHGGLPGASSEK3	10785.2	8149.91	9138.84
B1H260	B1H260	B1H260_RAT	F13b	Coagulation factor XIII B chain	1	YGCTSGYK	YGC(UniMod:4)TSGYK	2	YGC(UniMod:4)TSGYK2	50450.1	46912.1	44354.4
D3ZG07	D3ZG07	D3ZG07_RAT	Lsm6	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated	1	YGDAFIR	YGDAFIR	2	YGDAFIR2	28769.7	30293.6	28234.7
G3V7G9	G3V7G9	G3V7G9_RAT	Eif3l	Eukaryotic translation initiation factor 3 subunit L	1	YGDFFIR	YGDFFIR	2	YGDFFIR2	215339	222219	206678
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	YGDFQYCDQAK	YGDFQYC(UniMod:4)DQAK	2	YGDFQYC(UniMod:4)DQAK2	3566.02	8724.25	5229.86
Q6AY09	Q6AY09	HNRH2_RAT	Hnrnph2	Heterogeneous nuclear ribonucleoprotein H2	1	YGDGGSSFQSTTGHCVHMR	YGDGGSSFQSTTGHC(UniMod:4)VHMR	3	YGDGGSSFQSTTGHC(UniMod:4)VHMR3	1043.35	4194.11	
Q6AY09	Q6AY09	HNRH2_RAT	Hnrnph2	Heterogeneous nuclear ribonucleoprotein H2	1	YGDGGSSFQSTTGHCVHMR	YGDGGSSFQSTTGHC(UniMod:4)VHMR	4	YGDGGSSFQSTTGHC(UniMod:4)VHMR4	3608.38	11214.3	
Q8VHV7	Q8VHV7	HNRH1_RAT	Hnrnph1	Heterogeneous nuclear ribonucleoprotein H	1	YGDGGSTFQSTTGHCVHMR	YGDGGSTFQSTTGHC(UniMod:4)VHMR	3	YGDGGSTFQSTTGHC(UniMod:4)VHMR3	4069.51		
Q8VHV7	Q8VHV7	HNRH1_RAT	Hnrnph1	Heterogeneous nuclear ribonucleoprotein H	1	YGDGGSTFQSTTGHCVHMR	YGDGGSTFQSTTGHC(UniMod:4)VHMR	4	YGDGGSTFQSTTGHC(UniMod:4)VHMR4	10623.7	8228.14	5124.42
A0A8I6AFP0	A0A8I6AFP0	A0A8I6AFP0_RAT	Washc5	WASH complex subunit 5	1	YGDIIFDFSYFK	YGDIIFDFSYFK	2	YGDIIFDFSYFK2	7937.1	8975.11	
B2GV06	B2GV06	SCOT1_RAT	Oxct1	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial	1	YGDLANWMIPGK	YGDLANWMIPGK	2	YGDLANWMIPGK2	318557	312971	346978
P11505	Q64542;P11505	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	0	YGDLLPADGILIQGNDLK	YGDLLPADGILIQGNDLK	2	YGDLLPADGILIQGNDLK2	48516.3	28145.3	33299.7
P11505	Q64542;P11505	AT2B1_RAT	Atp2b1	Plasma membrane calcium-transporting ATPase 1	0	YGDLLPADGILIQGNDLK	YGDLLPADGILIQGNDLK	3	YGDLLPADGILIQGNDLK3	9983.19	1955.48	13871.7
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	YGDNNHSQGVNWFHWK	YGDNNHSQGVNWFHWK	3	YGDNNHSQGVNWFHWK3	39466.1	62266.5	42546.8
A0A8I6ARC1	A0A8I6ARC1	A0A8I6ARC1_RAT	Tnc	Tenascin C	1	YGDNNHSQGVNWFHWK	YGDNNHSQGVNWFHWK	4	YGDNNHSQGVNWFHWK4	150750	173938	173264
Q794E4	Q794E4	HNRPF_RAT	Hnrnpf	Heterogeneous nuclear ribonucleoprotein F	1	YGDSEFTVQSTTGHCVHMR	YGDSEFTVQSTTGHC(UniMod:4)VHMR	3	YGDSEFTVQSTTGHC(UniMod:4)VHMR3	3929.71	7668.38	4698.62
Q794E4	Q794E4	HNRPF_RAT	Hnrnpf	Heterogeneous nuclear ribonucleoprotein F	1	YGDSEFTVQSTTGHCVHMR	YGDSEFTVQSTTGHC(UniMod:4)VHMR	4	YGDSEFTVQSTTGHC(UniMod:4)VHMR4	18945.9	15567.3	14871.6
Q641Z2	Q641Z2	PTN9_RAT	Ptpn9	Tyrosine-protein phosphatase non-receptor type 9	1	YGDVPCLDQTR	YGDVPC(UniMod:4)LDQTR	2	YGDVPC(UniMod:4)LDQTR2	12815.9	7983.56	14088.7
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	YGEAGDGPGWGGPHPR	YGEAGDGPGWGGPHPR	2	YGEAGDGPGWGGPHPR2	6385.69	4277.25	8860.27
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	YGEAGDGPGWGGPHPR	YGEAGDGPGWGGPHPR	3	YGEAGDGPGWGGPHPR3	158095	237317	206391
Q6AXS4	Q6AXS4	RENR_RAT	Atp6ap2	Renin receptor	1	YGEDSEQFR	YGEDSEQFR	2	YGEDSEQFR2	2685.98	4702.81	3147.42
D3ZUU5	D3ZUU5	D3ZUU5_RAT	Dnajb1	DnaJ heat shock protein family (Hsp40) member B1	1	YGEEGLK	YGEEGLK	2	YGEEGLK2	11245.7	7263.52	10713.6
D3ZYR1	D3ZYR1	FCHO2_RAT	Fcho2	F-BAR domain only protein 2	1	YGEEQVK	YGEEQVK	2	YGEEQVK2	63147.8	56621.8	69580.2
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	YGEETPDESENR	YGEETPDESENR	2	YGEETPDESENR2	192832	173833	194754
P24054	P24054	SPRL1_RAT	Sparcl1	SPARC-like protein 1	1	YGEETPDESENRSEAGDNQGAK	YGEETPDESENRSEAGDNQGAK	3	YGEETPDESENRSEAGDNQGAK3	294373	290423	273069
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	YGEICGFSDTNLQK	YGEIC(UniMod:4)GFSDTNLQK	2	YGEIC(UniMod:4)GFSDTNLQK2	153101	161140	180616
F1M8H2	F1M8H2	F1M8H2_RAT	Wars2	tryptophan--tRNA ligase	1	YGELFPLPR	YGELFPLPR	2	YGELFPLPR2	5822.35	4307.71	6159.46
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	YGEMPVDK	YGEMPVDK	1	YGEMPVDK1	10922.3	22707.2	19751.3
Q99J82	Q99J82	ILK_RAT	Ilk	Integrin-linked protein kinase	1	YGEMPVDK	YGEMPVDK	2	YGEMPVDK2	1.11869e+06	995208	1.20734e+06
A0A0G2QC40	A0A0G2QC40	A0A0G2QC40_RAT	Mkrn1	RING-type E3 ubiquitin transferase	1	YGENCVYLHGDSCDMCGLQVLHPMDAAQR	YGENC(UniMod:4)VYLHGDSC(UniMod:4)DMC(UniMod:4)GLQVLHPMDAAQR	4	YGENC(UniMod:4)VYLHGDSC(UniMod:4)DMC(UniMod:4)GLQVLHPMDAAQR4	15868.6	8780.29	8246.79
B2RZ87	B2RZ87	MADL2_RAT	Myadml2	Myeloid-associated differentiation marker-like protein 2	1	YGEPGRPSDCPR	YGEPGRPSDC(UniMod:4)PR	3	YGEPGRPSDC(UniMod:4)PR3	55205.7	57148	57911.8
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	YGEPTLR	YGEPTLR	2	YGEPTLR2	283555	293405	275462
A0A8I5ZNC2	A0A8I5ZNC2	A0A8I5ZNC2_RAT	Tmed8	Transmembrane p24 trafficking protein family member 8	1	YGEVMPVYR	YGEVMPVYR	2	YGEVMPVYR2	36311.3	31338.6	33528.4
Q4QQW4	Q4QQW4;D3ZVU7;A0A8I6A1Y8;F7ENH8	HDAC1_RAT	Hdac1	Histone deacetylase 1	0	YGEYFPGTGDLR	YGEYFPGTGDLR	2	YGEYFPGTGDLR2	9237.53	7079.49	
P33436	P33436	MMP2_RAT	Mmp2	72 kDa type IV collagenase	1	YGFCPHEALFTMGGNGDGQPCK	YGFC(UniMod:4)PHEALFTMGGNGDGQPC(UniMod:4)K	3	YGFC(UniMod:4)PHEALFTMGGNGDGQPC(UniMod:4)K3	3086.95	5046.5	2623.67
A0A8I6GBE0	A0A8I6GBE0	A0A8I6GBE0_RAT	Dpp9	Dipeptidyl peptidase 9	1	YGFIDLSR	YGFIDLSR	2	YGFIDLSR2	7841.95	4039.15	4506.15
P26051	P26051	CD44_RAT	Cd44	CD44 antigen	1	YGFIEGHVVIPR	YGFIEGHVVIPR	2	YGFIEGHVVIPR2	291578	251109	239967
P26051	P26051	CD44_RAT	Cd44	CD44 antigen	1	YGFIEGHVVIPR	YGFIEGHVVIPR	3	YGFIEGHVVIPR3	5.52554e+06	6.20471e+06	6.0741e+06
D3ZSY8	D3ZSY8	D3ZSY8_RAT	Tbc1d10b	TBC1 domain family, member 10b	1	YGFLGGSQYSGSLESSIPVDVAR	YGFLGGSQYSGSLESSIPVDVAR	3	YGFLGGSQYSGSLESSIPVDVAR3	28110.7	35178.1	27379.6
Q9EQV9	Q9EQV9	CBPB2_RAT	Cpb2	Carboxypeptidase B2	1	YGFLLPER	YGFLLPER	2	YGFLLPER2	108711	99875.8	99259.5
Q63707	Q63707	PYRD_RAT	Dhodh	Dihydroorotate dehydrogenase (quinone), mitochondrial	1	YGFNSHGLSVVEHR	YGFNSHGLSVVEHR	4	YGFNSHGLSVVEHR4	5705.03		
B2GV24	B2GV24	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	1	YGFQEQLLYSVLEELVSTGR	YGFQEQLLYSVLEELVSTGR	3	YGFQEQLLYSVLEELVSTGR3	5468.54		
P18292	P18292	THRB_RAT	F2	Prothrombin	1	YGFYTHVFR	YGFYTHVFR	2	YGFYTHVFR2	130260	146406	116796
P18292	P18292	THRB_RAT	F2	Prothrombin	1	YGFYTHVFR	YGFYTHVFR	3	YGFYTHVFR3	311544	369623	264407
Q02445	Q02445	TFPI1_RAT	Tfpi	Tissue factor pathway inhibitor	1	YGGCLGNSNNFETLEECR	YGGC(UniMod:4)LGNSNNFETLEEC(UniMod:4)R	3	YGGC(UniMod:4)LGNSNNFETLEEC(UniMod:4)R3	303152	312424	341744
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	YGGDEIPFSPYR	YGGDEIPFSPYR	2	YGGDEIPFSPYR2	9.27921e+06	9.18195e+06	1.02056e+07
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	YGGDEIPFSPYR	YGGDEIPFSPYR	3	YGGDEIPFSPYR3	22990.7	23715.7	23395.5
D4ACA1	D4ACA1	D4ACA1_RAT	Nxpe3	Neurexophilin and PC-esterase domain family, member 3	1	YGGDYLQAR	YGGDYLQAR	2	YGGDYLQAR2	3350.14	5115.42	4432
D4A0T9	D4A0T9	D4A0T9_RAT	Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	1	YGGEYGGLTHPDITFTYFQR	YGGEYGGLTHPDITFTYFQR	3	YGGEYGGLTHPDITFTYFQR3	58733.3	74802.1	25952.9
Q7TNJ2	Q7TNJ2	ABCA7_RAT	Abca7	ATP-binding cassette sub-family A member 7	1	YGGFSLGGRDPDLPSGR	YGGFSLGGRDPDLPSGR	3	YGGFSLGGRDPDLPSGR3	15257	14088	14200.1
P08650	P08650	CO5_RAT	C5	Complement C5	1	YGGGFYSTQDTINAIEGLTEYSLLVK	YGGGFYSTQDTINAIEGLTEYSLLVK	3	YGGGFYSTQDTINAIEGLTEYSLLVK3		19699.3	42856.7
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	YGGHSSHVTNVAFLWDDSMVLTTGGK	YGGHSSHVTNVAFLWDDSMVLTTGGK	3	YGGHSSHVTNVAFLWDDSMVLTTGGK3	3368.4	10616.3	4702.11
Q6P6T4	Q6P6T4	EMAL2_RAT	Eml2	Echinoderm microtubule-associated protein-like 2	1	YGGHSSHVTNVAFLWDDSMVLTTGGK	YGGHSSHVTNVAFLWDDSMVLTTGGK	4	YGGHSSHVTNVAFLWDDSMVLTTGGK4	6996.79	4814.18	
Q5FWU3	Q5FWU3	ATG9A_RAT	Atg9a	Autophagy-related protein 9A	1	YGGITDPGTVPR	YGGITDPGTVPR	2	YGGITDPGTVPR2	11144.6	9614.33	9010.06
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	YGGPNHHLPLPDNWK	YGGPNHHLPLPDNWK	2	YGGPNHHLPLPDNWK2	77949.1	45378.7	33628.6
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	YGGPNHHLPLPDNWK	YGGPNHHLPLPDNWK	3	YGGPNHHLPLPDNWK3	526160	463665	300001
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	YGGPNHHLPLPDNWK	YGGPNHHLPLPDNWK	4	YGGPNHHLPLPDNWK4	1.72793e+06	1.40495e+06	1.19967e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	YGGPYHIGGSPFK	YGGPYHIGGSPFK	2	YGGPYHIGGSPFK2	342007	295419	293387
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	YGGPYHIGGSPFK	YGGPYHIGGSPFK	3	YGGPYHIGGSPFK3	8.15521e+06	7.9694e+06	9.09761e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	YGGQPVPNFPSK	YGGQPVPNFPSK	2	YGGQPVPNFPSK2	3.27671e+06	3.55902e+06	3.73265e+06
Q6AXM7	Q6AXM7	HBS1L_RAT	Hbs1l	HBS1-like protein	1	YGGSTVAAGVVTEIKE	YGGSTVAAGVVTEIKE	2	YGGSTVAAGVVTEIKE2	3980.59	2933.41	5086.24
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	YGGTAQSLTLK	YGGTAQSLTLK	2	YGGTAQSLTLK2	9465.5	9953.38	11855.2
P18484	P18484	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	1	YGGTFQNVSVK	YGGTFQNVSVK	2	YGGTFQNVSVK2	15261.9	16220.3	15077.4
Q499N6	Q499N6	UBXN1_RAT	Ubxn1	UBX domain-containing protein 1	1	YGGTVGSR	YGGTVGSR	2	YGGTVGSR2	26658.4		27290.9
P24155	P24155	THOP1_RAT	Thop1	Thimet oligopeptidase	1	YGHAACFGLQPGCLR	YGHAAC(UniMod:4)FGLQPGC(UniMod:4)LR	3	YGHAAC(UniMod:4)FGLQPGC(UniMod:4)LR3	13812.6	8525.85	15124.2
D3ZGS5	D3ZGS5	D3ZGS5_RAT	Uaca	Uveal autoantigen with coiled-coil domains and ankyrin repeats	1	YGHALCLQK	YGHALC(UniMod:4)LQK	2	YGHALC(UniMod:4)LQK2	8310.68	9301.46	8348.72
A0A8I5ZRD0	A0A8I5ZRD0;A0A8I6AGL0	A0A8I5ZRD0_RAT	Ankrd28	Ankyrin repeat domain 28	0	YGHELLINTLITSGADTAK	YGHELLINTLITSGADTAK	3	YGHELLINTLITSGADTAK3	19106.3	18625.9	25199.5
G3V7L1	G3V7L1	UTRN_RAT	Utrn	Utrophin	1	YGHLEASPDDGQNQFSDIIK	YGHLEASPDDGQNQFSDIIK	3	YGHLEASPDDGQNQFSDIIK3	121638	145520	139641
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	YGIDKDK	YGIDKDK	1	YGIDKDK1	3275	1592.46	1367.78
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	YGIDKDK	YGIDKDK	2	YGIDKDK2	64687.6	70069.6	106126
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	YGIDKDKVDK	YGIDKDKVDK	2	YGIDKDKVDK2	9472.32	8739.56	11664.9
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	YGIDKDKVDK	YGIDKDKVDK	3	YGIDKDKVDK3	456262	475019	372096
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	YGIEPTMVVQGVK	YGIEPTMVVQGVK	2	YGIEPTMVVQGVK2	81018.9	88592.1	80453.9
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	YGILADAR	YGILADAR	2	YGILADAR2	638187	638396	701241
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	YGIMTHVTQK	YGIMTHVTQK	2	YGIMTHVTQK2	931106	986838	892282
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	YGIMTHVTQK	YGIMTHVTQK	3	YGIMTHVTQK3	2.77535e+06	3.44977e+06	3.39208e+06
Q505J8	Q505J8	SYFA_RAT	Farsa	Phenylalanine--tRNA ligase alpha subunit	1	YGINNIR	YGINNIR	2	YGINNIR2	18317.3	11292.2	17120
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	YGINPAR	YGINPAR	2	YGINPAR2	9304.96	11380.9	6155.64
Q5XFX0	Q5XFX0	TAGL2_RAT	Tagln2	Transgelin-2	1	YGINTTDIFQTVDLWEGK	YGINTTDIFQTVDLWEGK	3	YGINTTDIFQTVDLWEGK3	33861.6	43441.9	48283.3
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	YGIPIGAK	YGIPIGAK	2	YGIPIGAK2	6544.66	4552.7	3728.88
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	YGIPIGAKPTNVQLAK	YGIPIGAKPTNVQLAK	3	YGIPIGAKPTNVQLAK3	19659.2	20542.3	23531.3
Q99P74	Q99P74	RB27B_RAT	Rab27b	Ras-related protein Rab-27B	1	YGIPYFETSAATGQNVEK	YGIPYFETSAATGQNVEK	3	YGIPYFETSAATGQNVEK3	219568	239919	251134
A0A8I6AM38	A0A8I6AM38;G3V7Q7	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	0	YGIQMPAFSK	YGIQMPAFSK	2	YGIQMPAFSK2	170300	148469	136973
Q6AY17	Q6AY17	AB17B_RAT	Abhd17b	Alpha/beta hydrolase domain-containing protein 17B	1	YGIRPENVIIYGQSIGTVPSVDLAAR	YGIRPENVIIYGQSIGTVPSVDLAAR	3	YGIRPENVIIYGQSIGTVPSVDLAAR3	32013.3	24672.9	27954.4
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	YGIVDYMVEQSGPPSK	YGIVDYMVEQSGPPSK	2	YGIVDYMVEQSGPPSK2	534821	522118	494939
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	YGIVDYMVEQSGPPSK	YGIVDYMVEQSGPPSK	3	YGIVDYMVEQSGPPSK3	485872	556108	631751
P38659	P38659	PDIA4_RAT	Pdia4	Protein disulfide-isomerase A4	1	YGIVDYMVEQSGPPSKEILTLK	YGIVDYMVEQSGPPSKEILTLK	3	YGIVDYMVEQSGPPSKEILTLK3	14502.3	22123.9	21318.3
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	YGIVGGNTHQEFR	YGIVGGNTHQEFR	2	YGIVGGNTHQEFR2	3202.72	3257.92	
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	YGIVGGNTHQEFR	YGIVGGNTHQEFR	3	YGIVGGNTHQEFR3	13401.1	6574	10933.7
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	YGKPLQLTLQACDVK	YGKPLQLTLQAC(UniMod:4)DVK	2	YGKPLQLTLQAC(UniMod:4)DVK2	6175.57		2323.64
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	YGKPLQLTLQACDVK	YGKPLQLTLQAC(UniMod:4)DVK	3	YGKPLQLTLQAC(UniMod:4)DVK3	17541.6	19889.6	25812.3
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	YGKPVVDYSK	YGKPVVDYSK	3	YGKPVVDYSK3		20417.5	18136.7
P11884	P11884	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	1	YGLAAAVFTK	YGLAAAVFTK	2	YGLAAAVFTK2	222103	214818	252828
O08984	O08984	LBR_RAT	Lbr	Delta(14)-sterol reductase LBR	1	YGLAWEK	YGLAWEK	2	YGLAWEK2	59476.7	77447.6	64724
O08774	O08774	RGS12_RAT	Rgs12	Regulator of G-protein signaling 12	1	YGLDLGSLLVR	YGLDLGSLLVR	2	YGLDLGSLLVR2	6945.98	20347.3	12560.6
A0A8J8XL70	A0A8J8XL70	A0A8J8XL70_RAT	Serpinf1	Serpin family F member 1	1	YGLDSDLNCK	YGLDSDLNC(UniMod:4)K	2	YGLDSDLNC(UniMod:4)K2	70070.8	63512.2	67496.9
A0A8I6GJC3	A0A8I6GJC3;A0A8I6GKS7	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	0	YGLECLFR	YGLEC(UniMod:4)LFR	2	YGLEC(UniMod:4)LFR2	10311.2	9764.22	6894.24
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	YGLFPANYVELR	YGLFPANYVELR	2	YGLFPANYVELR2	3.18505e+06	3.4058e+06	3.26373e+06
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	YGLFPANYVELRQ	YGLFPANYVELRQ	2	YGLFPANYVELRQ2	335000	499663	499868
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	YGLFPANYVELRQ	YGLFPANYVELRQ	3	YGLFPANYVELRQ3	11646.9	14638.1	18523
D3ZDX5	D3ZDX5	D3ZDX5_RAT	Plxnb1	Plexin B1	1	YGLIQAAAVATSK	YGLIQAAAVATSK	2	YGLIQAAAVATSK2	43605.2	53225.8	47235.9
Q561S0	A0A1W2Q6F8;Q561S0	NDUAA_RAT	Ndufa10	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial	0	YGLLASILGDK	YGLLASILGDK	2	YGLLASILGDK2	152758	82164	76790.2
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	YGLLFER	YGLLFER	2	YGLLFER2	30077	22995	27521.9
D4A1Y0	D4A1Y0	D4A1Y0_RAT	Scyl2	SCY1 like pseudokinase 2	1	YGLLQVSEGLSFLHSSVK	YGLLQVSEGLSFLHSSVK	3	YGLLQVSEGLSFLHSSVK3	11596.9	6521.46	9275.96
P16970	P16970	ABCD3_RAT	Abcd3	ATP-binding cassette sub-family D member 3	1	YGLNELK	YGLNELK	2	YGLNELK2	10297.8	11653.8	10498.5
P62275	A0A8I6ACA6;A0A8L2ULK7;P62275	RS29_RAT	Rps29	Small ribosomal subunit protein uS14	0	YGLNMCR	YGLNMC(UniMod:4)R	2	YGLNMC(UniMod:4)R2	15006.9	10374.7	8297.28
Q5U2X6	Q5U2X6	CCD47_RAT	Ccdc47	PAT complex subunit CCDC47	1	YGLPDSLAILSEMGEVTEGMMDTK	YGLPDSLAILSEMGEVTEGMMDTK	3	YGLPDSLAILSEMGEVTEGMMDTK3	1838.04		
P35815	P20650;P35815	PPM1B_RAT	Ppm1b	Protein phosphatase 1B	0	YGLSSMQGWR	YGLSSMQGWR	2	YGLSSMQGWR2	81074.2	60933.5	52482.5
A0A8I5ZZ89	A0A8I5ZZ89	A0A8I5ZZ89_RAT	Elp3	Elongator complex protein 3	1	YGLSSQPR	YGLSSQPR	2	YGLSSQPR2	13390.9	6149.83	7788.91
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	YGLTLDPETDSEYLSR	YGLTLDPETDSEYLSR	2	YGLTLDPETDSEYLSR2	37435.6	41269.5	42401
Q6MG08	Q6MG08	ABCF1_RAT	Abcf1	ATP-binding cassette sub-family F member 1	1	YGLVGPNGK	YGLVGPNGK	2	YGLVGPNGK2	39185	51589.9	39819.1
A0A0G2JZ53	A0A0G2JZ53	A0A0G2JZ53_RAT	Birc6	Baculoviral IAP repeat-containing 6	1	YGLYSSPFDPVLFDLEMSGSSCK	YGLYSSPFDPVLFDLEMSGSSC(UniMod:4)K	3	YGLYSSPFDPVLFDLEMSGSSC(UniMod:4)K3	3935.9		
D4A5G8	D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	YGMGTSVER	YGMGTSVER	2	YGMGTSVER2	63342	64285.5	75896
P0CE43	P0CE43	GRB10_RAT	Grb10	Growth factor receptor-bound protein 10	1	YGMLLYQNYR	YGMLLYQNYR	2	YGMLLYQNYR2	20975.9	22543.8	19912
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	YGMNCLIQFEDFANLNAFR	YGMNC(UniMod:4)LIQFEDFANLNAFR	3	YGMNC(UniMod:4)LIQFEDFANLNAFR3	4354.12		
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	YGMNPHQTPAQLYTLKPK	YGMNPHQTPAQLYTLKPK	3	YGMNPHQTPAQLYTLKPK3	3051.56	2836.73	
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	YGMNPHQTPAQLYTLKPK	YGMNPHQTPAQLYTLKPK	4	YGMNPHQTPAQLYTLKPK4	32988	36462.4	36232.4
D3ZUX7	D3ZUX7	D3ZUX7_RAT	Acsf3	Acyl-CoA synthetase family member 3	1	YGMTEIGMALSNPLTEAR	YGMTEIGMALSNPLTEAR	2	YGMTEIGMALSNPLTEAR2	3656.45	3819.98	4126.76
P33436	P33436	MMP2_RAT	Mmp2	72 kDa type IV collagenase	1	YGNADGEYCK	YGNADGEYC(UniMod:4)K	2	YGNADGEYC(UniMod:4)K2	3913.25	3155.89	4956.83
Q64620	Q64620	PPP6_RAT	Ppp6c	Serine/threonine-protein phosphatase 6 catalytic subunit	1	YGNANAWR	YGNANAWR	2	YGNANAWR2	109531	106025	118426
P62716	A0A0G2JYA4;P63331;P62716	PP2AB_RAT	Ppp2cb	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	0	YGNANVWK	YGNANVWK	2	YGNANVWK2	129270	120803	126284
Q5PQN2	Q5PQN2	BFAR_RAT	Bfar	Bifunctional apoptosis regulator	1	YGNDQNPLAPSTGR	YGNDQNPLAPSTGR	2	YGNDQNPLAPSTGR2	9435.64	8667.59	5506.35
P63144	P63144	KCAB1_RAT	Kcnab1	Voltage-gated potassium channel subunit beta-1	1	YGNGVPESSR	YGNGVPESSR	2	YGNGVPESSR2	26640	23172.5	45509.4
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	YGNHQDR	YGNHQDR	2	YGNHQDR2	21136.6	2850.85	18635.4
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	YGNKPEDCPYLWAHMK	YGNKPEDC(UniMod:4)PYLWAHMK	4	YGNKPEDC(UniMod:4)PYLWAHMK4	5156.58	7574.37	6336.31
A0A8I6AEZ2	A0A8I6AEZ2	A0A8I6AEZ2_RAT	Mtmr7	phosphatidylinositol-3-phosphatase	1	YGNLDGDPK	YGNLDGDPK	2	YGNLDGDPK2	15704.7	10675.9	21746.5
P09812	P53534;P09812	PYGM_RAT	Pygm	Glycogen phosphorylase, muscle form	0	YGNPWEK	YGNPWEK	2	YGNPWEK2	47948.7	61252.7	45247.6
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	YGNSSASGIEILAIER	YGNSSASGIEILAIER	2	YGNSSASGIEILAIER2	9432.72	10272.4	8060.2
P37727	P37727	RAE1_RAT	Chm	Rab proteins geranylgeranyltransferase component A 1	1	YGNTPFLFPLYGQGELPQCFCR	YGNTPFLFPLYGQGELPQC(UniMod:4)FC(UniMod:4)R	3	YGNTPFLFPLYGQGELPQC(UniMod:4)FC(UniMod:4)R3	11462.6	11140.7	9746.81
F1LSG7	F1LSG7	F1LSG7_RAT	Fgfr2	Fibroblast growth factor receptor	1	YGPDGLPYLK	YGPDGLPYLK	2	YGPDGLPYLK2	27262.2	20932.4	15075.7
D4A2W1	D4A2W1	D4A2W1_RAT	Enpp4	Ectonucleotide pyrophosphatase/phosphodiesterase 4	1	YGPEDKFNMR	YGPEDKFNMR	3	YGPEDKFNMR3	19111.3	29376.8	34058.9
D3ZY47	D3ZY47	D3ZY47_RAT	C19h1orf198	Similar to RIKEN cDNA 2310022B05	1	YGPEWAR	YGPEWAR	2	YGPEWAR2	20995.6	19560.4	14950.2
P49430	P49430	THAS_RAT	Tbxas1	Thromboxane-A synthase	1	YGPLCGYYLGR	YGPLC(UniMod:4)GYYLGR	2	YGPLC(UniMod:4)GYYLGR2	295138	318371	295323
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	YGPLPGPAASR	YGPLPGPAASR	2	YGPLPGPAASR2	17511	11913.3	9849.43
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	YGPLPGPAASRPVTSGLTR	YGPLPGPAASRPVTSGLTR	3	YGPLPGPAASRPVTSGLTR3	47866.2	43417.6	75243.3
G3V6Q3	G3V6Q3	G3V6Q3_RAT	Wdr13	Uncharacterized protein	1	YGPLSEPGSAR	YGPLSEPGSAR	2	YGPLSEPGSAR2	34852.9	36240	28339.1
A0A8J8Y9E0	A0A8J8Y9E0	A0A8J8Y9E0_RAT	Tra2a	Transformer 2 alpha homolog	1	YGPLSGVNVVYDQR	YGPLSGVNVVYDQR	2	YGPLSGVNVVYDQR2	4129.58		3071.93
P36970	P36970	GPX4_RAT	Gpx4	Phospholipid hydroperoxide glutathione peroxidase	1	YGPMEEPQVIEK	YGPMEEPQVIEK	2	YGPMEEPQVIEK2	39868.2	31674.2	30393.9
P18596	P18596	AT2A3_RAT	Atp2a3	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3	1	YGPNELPTEEGK	YGPNELPTEEGK	2	YGPNELPTEEGK2	398305	352270	351071
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	YGPQGGCADHSVFER	YGPQGGC(UniMod:4)ADHSVFER	3	YGPQGGC(UniMod:4)ADHSVFER3	22500.4	13456.3	21187.6
P85968	P85968	6PGD_RAT	Pgd	6-phosphogluconate dehydrogenase, decarboxylating	1	YGPSLMPGGNK	YGPSLMPGGNK	2	YGPSLMPGGNK2	420287	453473	465540
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	YGPVMQR	YGPVMQR	2	YGPVMQR2	280007	299095	304393
B5DEN5	B5DEN5	B5DEN5_RAT	Eef1b2	Elongation factor 1-beta	1	YGPVSVADTTGSGAADAK	YGPVSVADTTGSGAADAK	2	YGPVSVADTTGSGAADAK2	887483	844864	823991
B5DEN5	B5DEN5	B5DEN5_RAT	Eef1b2	Elongation factor 1-beta	1	YGPVSVADTTGSGAADAK	YGPVSVADTTGSGAADAK	3	YGPVSVADTTGSGAADAK3	27732	31031.6	29252.6
Q6P7D4	Q6P7D4	CP20A_RAT	Cyp20a1	Cytochrome P450 20A1	1	YGPVVSFWFGR	YGPVVSFWFGR	2	YGPVVSFWFGR2	11535.3	10409.2	9716.19
B2RYN0	B2RYN0	B2RYN0_RAT	Pgm3	Phosphoacetylglucosamine mutase	1	YGQATIEGYCQK	YGQATIEGYC(UniMod:4)QK	2	YGQATIEGYC(UniMod:4)QK2	3595.53	1601.62	2667.72
P62138	P62138	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	1	YGQFSGLNPGGR	YGQFSGLNPGGR	2	YGQFSGLNPGGR2	79544.6	54228.8	47068
P62138	P62138	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	1	YGQFSGLNPGGRPITPPR	YGQFSGLNPGGRPITPPR	3	YGQFSGLNPGGRPITPPR3	183377	188798	228938
D3Z8E0	Q63531;F1M7N7;D3Z8E0	D3Z8E0_RAT	Rps6ka3	Ribosomal protein S6 kinase	0	YGQHPNIITLK	YGQHPNIITLK	3	YGQHPNIITLK3	13306.5	20629	9253.33
P60825	P60825	CIRBP_RAT	Cirbp	Cold-inducible RNA-binding protein	1	YGQISEVVVVK	YGQISEVVVVK	2	YGQISEVVVVK2	4743.2	4291.5	843.806
Q5PQN1	Q5PQN1	HERC4_RAT	Herc4	Probable E3 ubiquitin-protein ligase HERC4	1	YGQLGLGIECQK	YGQLGLGIEC(UniMod:4)QK	2	YGQLGLGIEC(UniMod:4)QK2	13570.5	16175.8	14324
Q5XHZ9	Q5XHZ9	PCH2_RAT	Trip13	Pachytene checkpoint protein 2 homolog	1	YGQLIEINSHSLFSK	YGQLIEINSHSLFSK	3	YGQLIEINSHSLFSK3	5361.07		4946.94
A0A8I6AW91	A0A8I6AW91	A0A8I6AW91_RAT	Srp72	Signal recognition particle subunit SRP72	1	YGQNSDFTR	YGQNSDFTR	2	YGQNSDFTR2	5176.23	4378.9	2204.39
P15473	P15473	IBP3_RAT	Igfbp3	Insulin-like growth factor-binding protein 3	1	YGQPLPGYDTK	YGQPLPGYDTK	2	YGQPLPGYDTK2	183129	142897	132545
F1LXP8	F1LXP8	F1LXP8_RAT	Arhgap18	Rho GTPase activating protein 18	1	YGQYTMNPESSTK	YGQYTMNPESSTK	2	YGQYTMNPESSTK2	42941.2	52558.3	38849
P29067	P29067	ARRB2_RAT	Arrb2	Beta-arrestin-2	1	YGREDLDVLGLSFR	YGREDLDVLGLSFR	3	YGREDLDVLGLSFR3	78897.2	75025.9	73806.6
P29066	P29066	ARRB1_RAT	Arrb1	Beta-arrestin-1	1	YGREDLDVLGLTFR	YGREDLDVLGLTFR	3	YGREDLDVLGLTFR3	46886.1	46248.1	40113.5
A0A8I5ZS67	A0A8I5ZS67	A0A8I5ZS67_RAT	Gigyf2	GRB10 interacting GYF protein 2	1	YGREEMLALFLK	YGREEMLALFLK	3	YGREEMLALFLK3	5970.64	6169.17	6031.51
D3ZQJ3	D3ZQJ3	D3ZQJ3_RAT	Gigyf1	GRB10 interacting GYF protein 1	1	YGREEMLALYVK	YGREEMLALYVK	3	YGREEMLALYVK3	1122.95	3669.81	2239.61
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	YGRPEDKNPNFATCVK	YGRPEDKNPNFATC(UniMod:4)VK	3	YGRPEDKNPNFATC(UniMod:4)VK3	20901.1	22842.4	15758
Q63772	Q63772	GAS6_RAT	Gas6	Growth arrest-specific protein 6	1	YGRPEDKNPNFATCVK	YGRPEDKNPNFATC(UniMod:4)VK	4	YGRPEDKNPNFATC(UniMod:4)VK4	46455.3	61963.2	57959.2
Q6PDU1	Q6PDU1	SRSF2_RAT	Srsf2	Serine/arginine-rich splicing factor 2	1	YGRPPDSHHSR	YGRPPDSHHSR	2	YGRPPDSHHSR2			6573.1
Q6PDU1	Q6PDU1	SRSF2_RAT	Srsf2	Serine/arginine-rich splicing factor 2	1	YGRPPDSHHSR	YGRPPDSHHSR	3	YGRPPDSHHSR3			36891.5
P06238	P06238	A2MG_RAT	A2m	Alpha-2-macroglobulin	1	YGSATFTR	YGSATFTR	2	YGSATFTR2	6708.15	8331	6365.35
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	YGSFFCDCGAK	YGSFFC(UniMod:4)DC(UniMod:4)GAK	2	YGSFFC(UniMod:4)DC(UniMod:4)GAK2	30416.3	30404.7	25686.1
D4A9Y0	D4A9Y0	D4A9Y0_RAT	Sdf2l1	Stromal cell-derived factor 2-like 1	1	YGSGSGQQSVTGVEASDDANSYWR	YGSGSGQQSVTGVEASDDANSYWR	3	YGSGSGQQSVTGVEASDDANSYWR3	18688.8	17122.1	13310.6
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	YGSINGATR	YGSINGATR	2	YGSINGATR2	50394.7	44643	48563.6
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	YGSIVDDER	YGSIVDDER	2	YGSIVDDER2	41641.8	47211	31870.5
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	YGSIVDDERLSAEEMDER	YGSIVDDERLSAEEMDER	3	YGSIVDDERLSAEEMDER3	6443.02	11936.7	7213.75
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	YGSPGNVSK	YGSPGNVSK	2	YGSPGNVSK2	57751.4	75543.5	54597.9
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	YGSQEHPIGDK	YGSQEHPIGDK	2	YGSQEHPIGDK2	82488.7	58798.6	44849.8
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	YGSQEHPIGDK	YGSQEHPIGDK	3	YGSQEHPIGDK3	1.06541e+06	1.11467e+06	1.25883e+06
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	YGSSHTDVIVTENEK	YGSSHTDVIVTENEK	3	YGSSHTDVIVTENEK3	14768.2	12742.1	9780.03
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	YGSVAFPNFEQGVACLR	YGSVAFPNFEQGVAC(UniMod:4)LR	2	YGSVAFPNFEQGVAC(UniMod:4)LR2	25903.4	29446	27471.6
Q9EQR2	Q9EQR2	ADAS_RAT	Agps	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	YGSVAFPNFEQGVACLR	YGSVAFPNFEQGVAC(UniMod:4)LR	3	YGSVAFPNFEQGVAC(UniMod:4)LR3	10074.7	8774.52	8076.25
Q5BJ92	Q5BJ92	PP4C_RAT	Ppp4c	Serine/threonine-protein phosphatase 4 catalytic subunit	1	YGSVTVWR	YGSVTVWR	2	YGSVTVWR2	9317.49	8477.17	8526.7
F1LPV0	F1LPV0	F1LPV0_RAT	Nars1	asparagine--tRNA ligase	1	YGTCPHGGYGLGLER	YGTC(UniMod:4)PHGGYGLGLER	3	YGTC(UniMod:4)PHGGYGLGLER3	26153.2	14760.8	24982
P58405	P58405	STRN3_RAT	Strn3	Striatin-3	1	YGTELNQGDLK	YGTELNQGDLK	2	YGTELNQGDLK2	50214.3	43000.6	48039.9
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	YGTETSGIPSSGSMDTHSLESK	YGTETSGIPSSGSMDTHSLESK	3	YGTETSGIPSSGSMDTHSLESK3	40328.6	48636.6	58396.4
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	YGTFMTPDLFGSK	YGTFMTPDLFGSK	2	YGTFMTPDLFGSK2	72786.1	64699.2	85852.2
Q5XII8	Q5XII8	CA043_RAT		Protein C1orf43 homolog	1	YGTGVFGQSEYLR	YGTGVFGQSEYLR	2	YGTGVFGQSEYLR2	4612.85		4215.35
B3DMA2	B3DMA2	ACD11_RAT	Acad11	Acyl-CoA dehydrogenase family member 11	1	YGTGVGYCK	YGTGVGYC(UniMod:4)K	2	YGTGVGYC(UniMod:4)K2	7866.35	5356.28	8946.29
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	YGTLFTMDR	YGTLFTMDR	2	YGTLFTMDR2	299184	324670	401532
P04906	P04906	GSTP1_RAT	Gstp1	Glutathione S-transferase P	1	YGTLIYTNYENGK	YGTLIYTNYENGK	2	YGTLIYTNYENGK2	35430.8	41112.1	44197.9
O55164	O55164	MPDZ_RAT	Mpdz	Multiple PDZ domain protein	1	YGTLTGQLHMIELEK	YGTLTGQLHMIELEK	3	YGTLTGQLHMIELEK3	7191.73	7676.86	3166.88
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	YGTQGCYLLK	YGTQGC(UniMod:4)YLLK	2	YGTQGC(UniMod:4)YLLK2	25862.3	33144.8	33200
Q9EQG6	Q9EQG6	KDIS_RAT	Kidins220	Kinase D-interacting substrate of 220 kDa	1	YGTTPLVWAAR	YGTTPLVWAAR	2	YGTTPLVWAAR2		4999.86	9548.87
B5DFJ4	B5DFJ4	B5DFJ4_RAT	Vps18	Vacuolar protein sorting-associated protein 18 homolog	1	YGTVEPQDK	YGTVEPQDK	2	YGTVEPQDK2	17300.9	11736.1	15538.6
D3ZZ26	D3ZZ26	D3ZZ26_RAT	Ppp1r3d	Protein phosphatase 1, regulatory subunit 3D	1	YGVAGAEYWDNNDGQDYSLTCR	YGVAGAEYWDNNDGQDYSLTC(UniMod:4)R	3	YGVAGAEYWDNNDGQDYSLTC(UniMod:4)R3	33111.4	29017.2	33714.2
F7EVW7	F7EVW7	F7EVW7_RAT	Gpaa1	Glycosylphosphatidylinositol anchor attachment 1	1	YGVEALTLR	YGVEALTLR	2	YGVEALTLR2	10362.3	4959.95	3192.23
Q9ER34	Q9ER34	ACON_RAT	Aco2	Aconitate hydratase, mitochondrial	1	YGVGFWR	YGVGFWR	2	YGVGFWR2	4544.02	4809.85	5081.96
D4A2H2	D4A2H2	SPTC1_RAT	Sptlc1	Serine palmitoyltransferase 1	1	YGVGTCGPR	YGVGTC(UniMod:4)GPR	2	YGVGTC(UniMod:4)GPR2	8204.72	12050.5	7928.78
A0A0U1RS25	A0A0U1RS25	A0A0U1RS25_RAT	Upf1	UPF1, RNA helicase and ATPase	1	YGVIIVGNPK	YGVIIVGNPK	2	YGVIIVGNPK2	20137.9	23029	14013.4
Q62733	Q62733	LAP2_RAT	Tmpo	Lamina-associated polypeptide 2, isoform beta	1	YGVNPGPIVGTTR	YGVNPGPIVGTTR	2	YGVNPGPIVGTTR2	7763.16	12362.9	3807.81
P06214	P06214	HEM2_RAT	Alad	Delta-aminolevulinic acid dehydratase	1	YGVNQLEEMLRPLVEAGLR	YGVNQLEEMLRPLVEAGLR	3	YGVNQLEEMLRPLVEAGLR3	8853.9	8342.52	11977.3
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	YGVQADRVDK	YGVQADRVDK	2	YGVQADRVDK2	37733.1	35074.9	42322.1
Q66HL2	Q66HL2	SRC8_RAT	Cttn	Src substrate cortactin	1	YGVQADRVDK	YGVQADRVDK	3	YGVQADRVDK3	408041	529411	577762
A0A8I6A0G8	A0A8I6A0G8	A0A8I6A0G8_RAT	Nbeal2	Neurobeachin-like 2	1	YGVQFILDALR	YGVQFILDALR	2	YGVQFILDALR2	149338	113406	96383
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	YGVSGYPTLK	YGVSGYPTLK	2	YGVSGYPTLK2	861424	744015	821112
D3ZZL3	D3ZZL3	D3ZZL3_RAT	Naglu	N-acetyl-alpha-glucosaminidase	1	YGVSQPDAVAAWR	YGVSQPDAVAAWR	2	YGVSQPDAVAAWR2	17220.8	17310.1	20016.5
P15178	P15178	SYDC_RAT	Dars1	Aspartate--tRNA ligase, cytoplasmic	1	YGVSSMIQSQEKPDR	YGVSSMIQSQEKPDR	3	YGVSSMIQSQEKPDR3	69498.2	84551.2	79177.7
Q5HZA4	A0A8J8XSR6;Q5HZA4	LYSM1_RAT	Lysmd1	LysM and putative peptidoglycan-binding domain-containing protein 1	0	YGVTMEQIK	YGVTMEQIK	2	YGVTMEQIK2	5131.54	5701.68	4046.24
Q78EG7	A0A8I6B5G4;Q78EG7	TP4A1_RAT	Ptp4a1	Protein tyrosine phosphatase type IVA 1	0	YGVTTIVR	YGVTTIVR	2	YGVTTIVR2		28600.3	24203.7
Q6P9X4	Q6P9X4	TP4A2_RAT	Ptp4a2	Protein tyrosine phosphatase type IVA 2	1	YGVTTLVR	YGVTTLVR	2	YGVTTLVR2	37413.6	33687.6	
A0A8I6A9R8	A0A8I6A9R8	A0A8I6A9R8_RAT	Cope	Coatomer subunit epsilon	1	YGVVLDEIKPSSAPELQAVR	YGVVLDEIKPSSAPELQAVR	3	YGVVLDEIKPSSAPELQAVR3	139592	132808	135046
D4A746	D4A746	D4A746_RAT	Gmppb	GDP-mannose pyrophosphorylase B	1	YGVVVCEADTGR	YGVVVC(UniMod:4)EADTGR	2	YGVVVC(UniMod:4)EADTGR2	23466.3	18064.9	19935.5
P08650	P08650	CO5_RAT	C5	Complement C5	1	YGVWTIK	YGVWTIK	1	YGVWTIK1	5935.81	5591.42	4221.95
P08650	P08650	CO5_RAT	C5	Complement C5	1	YGVWTIK	YGVWTIK	2	YGVWTIK2	739764	592618	603465
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	YGVYSYIYPNK	YGVYSYIYPNK	2	YGVYSYIYPNK2	3.6471e+06	3.97578e+06	4.17487e+06
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	YGVYSYIYPNKDWIQR	YGVYSYIYPNKDWIQR	3	YGVYSYIYPNKDWIQR3	14313.6	16957.2	10985.3
O70436	P84025;O70436	SMAD2_RAT	Smad2	Mothers against decapentaplegic homolog 2	0	YGWHPATVCK	YGWHPATVC(UniMod:4)K	3	YGWHPATVC(UniMod:4)K3	19975.6	16531.1	25152.9
A0A8I5ZX76	A0A8I5ZX76	A0A8I5ZX76_RAT	Eif3k	Eukaryotic translation initiation factor 3 subunit K	1	YGWSADESGQVFICSQEESIKPK	YGWSADESGQVFIC(UniMod:4)SQEESIKPK	3	YGWSADESGQVFIC(UniMod:4)SQEESIKPK3	13079.9	9525.33	7824.69
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	YGWWVGEMQGAIGLVPK	YGWWVGEMQGAIGLVPK	2	YGWWVGEMQGAIGLVPK2	284207	350287	350330
Q920G0	Q920G0	SKAP2_RAT	Skap2	Src kinase-associated phosphoprotein 2	1	YGWWVGEMQGAIGLVPK	YGWWVGEMQGAIGLVPK	3	YGWWVGEMQGAIGLVPK3	63294.1	79304.9	79847.4
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	YGYEIPVDMLCK	YGYEIPVDMLC(UniMod:4)K	2	YGYEIPVDMLC(UniMod:4)K2	1.96078e+06	1.8829e+06	1.97417e+06
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	YGYEIPVDMLCK	YGYEIPVDMLC(UniMod:4)K	3	YGYEIPVDMLC(UniMod:4)K3	13495.2	12726	17182.3
P60901	P60901	PSA6_RAT	Psma6	Proteasome subunit alpha type-6	1	YGYEIPVDMLCKR	YGYEIPVDMLC(UniMod:4)KR	3	YGYEIPVDMLC(UniMod:4)KR3	18040.7	27184.2	30304.1
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	YGYIHLYDLETGTCIYMNR	YGYIHLYDLETGTC(UniMod:4)IYMNR	3	YGYIHLYDLETGTC(UniMod:4)IYMNR3	63255.3	49434.6	54179.8
A0A0U1RRU5	A0A0U1RRU5	A0A0U1RRU5_RAT	Tab1	TGF-beta activated kinase 1/MAP3K7 binding protein 1	1	YGYTDIDLLSTAK	YGYTDIDLLSTAK	2	YGYTDIDLLSTAK2	9451.25	3935.29	11384.8
Q4KM73	Q4KM73	KCY_RAT	Cmpk1	UMP-CMP kinase	1	YGYTHLSAGELLR	YGYTHLSAGELLR	3	YGYTHLSAGELLR3	69632	60994	70950.7
P39069	P39069	KAD1_RAT	Ak1	Adenylate kinase isoenzyme 1	1	YGYTHLSTGDLLR	YGYTHLSTGDLLR	3	YGYTHLSTGDLLR3	10189.9		4917.8
Q07977	Q07977	SIA8B_RAT	St8sia2	Alpha-2,8-sialyltransferase 8B	1	YGYTSQASPHTMPLEFK	YGYTSQASPHTMPLEFK	3	YGYTSQASPHTMPLEFK3	17380.2	13765	11619
A0A8I6A254	A0A8I6A254	A0A8I6A254_RAT	Mrpl15	39S ribosomal protein L15, mitochondrial	1	YGYVLPDVTKDELFR	YGYVLPDVTKDELFR	3	YGYVLPDVTKDELFR3	6764.68		
D4A3E2	D4A3E2	D4A3E2_RAT	Npepl1	Aminopeptidase-like 1	1	YHAAVLTNSAEWEAACVK	YHAAVLTNSAEWEAAC(UniMod:4)VK	3	YHAAVLTNSAEWEAAC(UniMod:4)VK3	7754.82	6971.7	8839.1
Q924S1	Q924S1	PLCD_RAT	Agpat4	1-acyl-sn-glycerol-3-phosphate acyltransferase delta	1	YHADCYVR	YHADC(UniMod:4)YVR	2	YHADC(UniMod:4)YVR2	5522.35	5802.47	
Q641X3	Q641X3	HEXA_RAT	Hexa	Beta-hexosaminidase subunit alpha	1	YHAGSAAQAGCVVLDEAFRR	YHAGSAAQAGC(UniMod:4)VVLDEAFRR	4	YHAGSAAQAGC(UniMod:4)VVLDEAFRR4	7145.91	7512.75	4363.18
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	YHAIHVDIYR	YHAIHVDIYR	3	YHAIHVDIYR3	15871.9	12437.1	19284
M0R4Z8	M0R4Z8	M0R4Z8_RAT	Gatd1	Glutamine amidotransferase like class 1 domain containing 1	1	YHALLIPSCPGALTDLASSGSLAR	YHALLIPSC(UniMod:4)PGALTDLASSGSLAR	3	YHALLIPSC(UniMod:4)PGALTDLASSGSLAR3	20046.1	8015.26	10194.2
P97878	P97878	EXOC5_RAT	Exoc5	Exocyst complex component 5	1	YHDLECQLIQEFTSAQR	YHDLEC(UniMod:4)QLIQEFTSAQR	3	YHDLEC(UniMod:4)QLIQEFTSAQR3	9642.79	4121.83	10373.4
P07895	P07895	SODM_RAT	Sod2	Superoxide dismutase [Mn], mitochondrial	1	YHEALAK	YHEALAK	1	YHEALAK1	26684.2		21318.8
P07895	P07895	SODM_RAT	Sod2	Superoxide dismutase [Mn], mitochondrial	1	YHEALAK	YHEALAK	2	YHEALAK2	120977	121223	114953
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	YHEAWQK	YHEAWQK	1	YHEAWQK1	3127.2	4715.7	4034.32
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	YHEAWQK	YHEAWQK	2	YHEAWQK2	83584.6	80245.3	64964.4
D4A164	D4A164;A0A8I5ZRN3	D4A164_RAT	Nebl	Nebulette	0	YHEDFEK	YHEDFEK	2	YHEDFEK2	9174.16	3625.06	
M0R915	M0R915;A0A8I6GLQ4	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	0	YHEEEARLESFEDWPFYAHGTSPR	YHEEEARLESFEDWPFYAHGTSPR	4	YHEEEARLESFEDWPFYAHGTSPR4	2808.78		
Q99MZ8	Q99MZ8	LASP1_RAT	Lasp1	LIM and SH3 domain protein 1	1	YHEEFEK	YHEEFEK	2	YHEEFEK2	88227.8	50049.8	48215.4
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	YHEISIIYHNDKK	YHEISIIYHNDKK	4	YHEISIIYHNDKK4	7197.63	6412.18	1971.22
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	YHEQLSTQSLIELFESFK	YHEQLSTQSLIELFESFK	3	YHEQLSTQSLIELFESFK3	8689.07	9447.09	1672.26
D3ZHW0	D3ZHW0	D3ZHW0_RAT	Dhx29	ATP-dependent RNA helicase DHX29	1	YHESSQMSSLVETFVSK	YHESSQMSSLVETFVSK	3	YHESSQMSSLVETFVSK3	1697.49	4460.92	
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	YHFEALADTLISSEFYDDANDLFSK	YHFEALADTLISSEFYDDANDLFSK	3	YHFEALADTLISSEFYDDANDLFSK3	11751	8672.84	9996.88
Q5RJR2	Q5RJR2;B0BMY7;A0A8I6GGS8	TWF1_RAT	Twf1	Twinfilin-1	0	YHFFLYK	YHFFLYK	2	YHFFLYK2	33957.5	46526.5	30260
F1LXF5	F1LXF5	F1LXF5_RAT	Get4	Guided entry of tail-anchored proteins factor 4	1	YHFLHSTDGEGCANMLVEYSTAR	YHFLHSTDGEGC(UniMod:4)ANMLVEYSTAR	3	YHFLHSTDGEGC(UniMod:4)ANMLVEYSTAR3	8974.61	10987.2	7677.76
F1LXF5	F1LXF5	F1LXF5_RAT	Get4	Guided entry of tail-anchored proteins factor 4	1	YHFLHSTDGEGCANMLVEYSTAR	YHFLHSTDGEGC(UniMod:4)ANMLVEYSTAR	4	YHFLHSTDGEGC(UniMod:4)ANMLVEYSTAR4	23374.4	31629.9	31580.2
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	YHFVTPLTSMVVTK	YHFVTPLTSMVVTK	2	YHFVTPLTSMVVTK2	28682.6	20478.7	20776.9
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	YHFVTPLTSMVVTK	YHFVTPLTSMVVTK	3	YHFVTPLTSMVVTK3	93078.5	92529	88014.7
Q63416	Q63416	ITIH3_RAT	Itih3	Inter-alpha-trypsin inhibitor heavy chain H3	1	YHFVTPLTSMVVTKPEDNEDQTAIADK	YHFVTPLTSMVVTKPEDNEDQTAIADK	4	YHFVTPLTSMVVTKPEDNEDQTAIADK4	2.61881e+06	2.89652e+06	2.6654e+06
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	YHGDPIPCPK	YHGDPIPC(UniMod:4)PK	2	YHGDPIPC(UniMod:4)PK2	2.90701e+06	3.59999e+06	3.24058e+06
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	YHGDPIPCPK	YHGDPIPC(UniMod:4)PK	3	YHGDPIPC(UniMod:4)PK3	1.7109e+07	1.98437e+07	2.0406e+07
D3ZJD8	D3ZJD8	D3ZJD8_RAT	Clec1b	C-type lectin domain family 1 member B	1	YHGDSCYGFFR	YHGDSC(UniMod:4)YGFFR	2	YHGDSC(UniMod:4)YGFFR2	171724	219946	189788
D3ZJD8	D3ZJD8	D3ZJD8_RAT	Clec1b	C-type lectin domain family 1 member B	1	YHGDSCYGFFR	YHGDSC(UniMod:4)YGFFR	3	YHGDSC(UniMod:4)YGFFR3	35827.9	616779	671771
D4A5G8	D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	YHGHSMSDPGVSYR	YHGHSMSDPGVSYR	3	YHGHSMSDPGVSYR3	28380.7	29375.2	31268
D4A5G8	D4A5G8;P26284	D4A5G8_RAT	Pdha1l1	Pyruvate dehydrogenase E1 component subunit alpha	0	YHGHSMSDPGVSYR	YHGHSMSDPGVSYR	4	YHGHSMSDPGVSYR4	17411.3	14211.9	8041.03
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	YHGNVILLR	YHGNVILLR	2	YHGNVILLR2	11048.4	10596.4	
D3ZHQ1	D3ZHQ1	D3ZHQ1_RAT	Dpp8	Dipeptidylpeptidase 8	1	YHGYMMAK	YHGYMMAK	2	YHGYMMAK2	9661.54	11440.4	6328.97
Q6AY49	Q6AY49	Q6AY49_RAT	Tusc3	Tumor suppressor candidate 3	1	YHGYPYSFLIK	YHGYPYSFLIK	3	YHGYPYSFLIK3	3257.83	8340.49	5795.09
O35777	O35777	MAGT1_RAT	Magt1	Magnesium transporter protein 1	1	YHGYPYSFLMS	YHGYPYSFLMS	2	YHGYPYSFLMS2	23304.8	17269.4	21181.9
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	YHIDGAR	YHIDGAR	2	YHIDGAR2	185955	178078	197467
F7FH41	F7FH41	F7FH41_RAT	Csnk2a2	Casein kinase 2 alpha 2	1	YHIDLDPHFNDILGQHSR	YHIDLDPHFNDILGQHSR	4	YHIDLDPHFNDILGQHSR4	33223	23448.4	37069.1
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	YHIGDEILVSGGIGALVR	YHIGDEILVSGGIGALVR	2	YHIGDEILVSGGIGALVR2	3520.6	9489.11	
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	YHIGDEILVSGGIGALVR	YHIGDEILVSGGIGALVR	3	YHIGDEILVSGGIGALVR3	57909	51178.1	52248.1
P19234	P19234	NDUV2_RAT	Ndufv2	NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial	1	YHIQVCTTTPCMLR	YHIQVC(UniMod:4)TTTPC(UniMod:4)MLR	3	YHIQVC(UniMod:4)TTTPC(UniMod:4)MLR3	30401.5	23509.7	22051.1
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	YHISALYVVDLK	YHISALYVVDLK	2	YHISALYVVDLK2	25916.2	15683.8	23846.9
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	YHISALYVVDLK	YHISALYVVDLK	3	YHISALYVVDLK3	36170.8	37709.9	34832.8
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	YHISALYVVDLKK	YHISALYVVDLKK	3	YHISALYVVDLKK3	13930.6	12332.1	12265.6
A0A8I6A4A2	A0A8I6A4A2	A0A8I6A4A2_RAT	Vps13a	Vacuolar protein sorting 13 homolog A	1	YHISVTEEGSDK	YHISVTEEGSDK	3	YHISVTEEGSDK3	7340.14	14255.5	12508
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	YHLFIGDLDK	YHLFIGDLDK	3	YHLFIGDLDK3	11870.6	9406.69	13452.8
P31044	P31044	PEBP1_RAT	Pebp1	Phosphatidylethanolamine-binding protein 1	1	YHLGAPVAGTCFQAEWDDSVPK	YHLGAPVAGTC(UniMod:4)FQAEWDDSVPK	3	YHLGAPVAGTC(UniMod:4)FQAEWDDSVPK3	4933.65	4712.67	5433.48
P48032	P48032	TIMP3_RAT	Timp3	Metalloproteinase inhibitor 3	1	YHLGCNCK	YHLGC(UniMod:4)NC(UniMod:4)K	2	YHLGC(UniMod:4)NC(UniMod:4)K2	417961		472757
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	YHLGHASSELR	YHLGHASSELR	2	YHLGHASSELR2	20522.2	18360.8	19224.7
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	YHLGHASSELR	YHLGHASSELR	3	YHLGHASSELR3	372390	464383	367206
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	YHLGHASSELRK	YHLGHASSELRK	2	YHLGHASSELRK2	7874.76	4443.84	3569.51
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	YHLGHASSELRK	YHLGHASSELRK	3	YHLGHASSELRK3	149492	111878	170104
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	YHLGMYHR	YHLGMYHR	2	YHLGMYHR2	19095.1	9646.02	16620.9
D3ZUM4	D3ZUM4	D3ZUM4_RAT	Glb1	Beta-galactosidase	1	YHLGNDIILFTTDGAAEK	YHLGNDIILFTTDGAAEK	3	YHLGNDIILFTTDGAAEK3	14913.6	4711.92	6902.78
G3V9A0	G3V9A0	G3V9A0_RAT	Plekhg2	Pleckstrin homology and RhoGEF domain containing G2	1	YHLLLQELGK	YHLLLQELGK	3	YHLLLQELGK3	1345.2	1804.27	423.547
P54100	A0A8I5ZPB5;P54100	VAV_RAT	Vav1	Proto-oncogene vav	0	YHLLLQELVK	YHLLLQELVK	2	YHLLLQELVK2	25481.8	30283.8	19936
P54100	A0A8I5ZPB5;P54100	VAV_RAT	Vav1	Proto-oncogene vav	0	YHLLLQELVK	YHLLLQELVK	3	YHLLLQELVK3	164169	208204	137515
F1MAF5	F1MAF5	F1MAF5_RAT	Pcid2	PCI domain-containing protein 2	1	YHLMQFSEVTR	YHLMQFSEVTR	3	YHLMQFSEVTR3	3495.38		1690.78
Q5RJQ4	Q5RJQ4	SIR2_RAT	Sirt2	NAD-dependent protein deacetylase sirtuin-2	1	YHLPYPEAIFEISYFK	YHLPYPEAIFEISYFK	3	YHLPYPEAIFEISYFK3	12658.1	8138.95	21497.3
A0A8I6A4J8	A0A8I6A4J8	A0A8I6A4J8_RAT	Anapc1	Anaphase promoting complex subunit 1	1	YHLQALR	YHLQALR	2	YHLQALR2		1336.55	
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	YHMAVTWLMDSVIHFLK	YHMAVTWLMDSVIHFLK	3	YHMAVTWLMDSVIHFLK3			13873.1
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	YHMAVTWLMDSVIHFLK	YHMAVTWLMDSVIHFLK	4	YHMAVTWLMDSVIHFLK4		8326.11	1468.88
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	YHMVDRR	YHMVDRR	2	YHMVDRR2			34678
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	YHPCFWIDGQYLCCSQTAK	YHPC(UniMod:4)FWIDGQYLC(UniMod:4)C(UniMod:4)SQTAK	3	YHPC(UniMod:4)FWIDGQYLC(UniMod:4)C(UniMod:4)SQTAK3	35720.9	30850.6	30705.4
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	YHPCYPGVR	YHPC(UniMod:4)YPGVR	2	YHPC(UniMod:4)YPGVR2	2.47305e+06	2.13792e+06	1.93879e+06
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	YHPCYPGVR	YHPC(UniMod:4)YPGVR	3	YHPC(UniMod:4)YPGVR3	6.21317e+06	6.96195e+06	7.30211e+06
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	YHPDKGGDEVMFMR	YHPDKGGDEVMFMR	3	YHPDKGGDEVMFMR3	6569.33	14217.8	4969.88
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	YHPDKGGDEVMFMR	YHPDKGGDEVMFMR	4	YHPDKGGDEVMFMR4	4885.78	7777.7	9569.42
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	YHPDKNPDEGEK	YHPDKNPDEGEK	3	YHPDKNPDEGEK3			5233.57
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	YHPDKNPDEGEKFK	YHPDKNPDEGEKFK	3	YHPDKNPDEGEKFK3	19928	27833.4	
Q4QR73	Q4QR73	Q4QR73_RAT	Dnaja4	DnaJ (Hsp40) homolog, subfamily A, member 4	1	YHPDKNPDEGEKFK	YHPDKNPDEGEKFK	4	YHPDKNPDEGEKFK4	11867.3	21746.9	8660.63
P60905	P60905	DNJC5_RAT	Dnajc5	DnaJ homolog subfamily C member 5	1	YHPDKNPDNPEAADK	YHPDKNPDNPEAADK	2	YHPDKNPDNPEAADK2			2230.92
P60905	P60905	DNJC5_RAT	Dnajc5	DnaJ homolog subfamily C member 5	1	YHPDKNPDNPEAADK	YHPDKNPDNPEAADK	3	YHPDKNPDNPEAADK3	10270.5		15980.4
P60905	P60905	DNJC5_RAT	Dnajc5	DnaJ homolog subfamily C member 5	1	YHPDKNPDNPEAADKFK	YHPDKNPDNPEAADKFK	3	YHPDKNPDNPEAADKFK3	18550.5	22808.9	24667.1
P60905	P60905	DNJC5_RAT	Dnajc5	DnaJ homolog subfamily C member 5	1	YHPDKNPDNPEAADKFK	YHPDKNPDNPEAADKFK	4	YHPDKNPDNPEAADKFK4	74290.7	63188.2	67029.3
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	YHPDKNPEGR	YHPDKNPEGR	3	YHPDKNPEGR3			11599.6
P23562	P23562	B3AT_RAT	Slc4a1	Band 3 anion transport protein	1	YHPDVPFVK	YHPDVPFVK	2	YHPDVPFVK2	32068.4	25656.7	29703.8
P18445	D3ZF07;F1M3C2;D3ZI60;D3ZG03;P18445	RL27A_RAT	Rpl27a	Large ribosomal subunit protein uL15	0	YHPGYFGK	YHPGYFGK	2	YHPGYFGK2	71985.8	29071.9	10655
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	YHPIDIETSVSR	YHPIDIETSVSR	2	YHPIDIETSVSR2	1991.82	7914.06	8104.04
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	YHPIDIETSVSR	YHPIDIETSVSR	3	YHPIDIETSVSR3	10760.8	11429.9	5299.4
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	YHPKPVLHMASPEQPPTDLNR	YHPKPVLHMASPEQPPTDLNR	3	YHPKPVLHMASPEQPPTDLNR3	2243.22		4499.12
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	YHPKPVLHMASPEQPPTDLNR	YHPKPVLHMASPEQPPTDLNR	4	YHPKPVLHMASPEQPPTDLNR4	69935.7	71648.5	59875.8
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	YHPLFGNQEELDK	YHPLFGNQEELDK	2	YHPLFGNQEELDK2	14903.4	15879.2	14749
A0A8I6AQA1	A0A8I6AQA1	A0A8I6AQA1_RAT	Arap1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	1	YHPLFGNQEELDK	YHPLFGNQEELDK	3	YHPLFGNQEELDK3	30974.5	37366.2	39248.9
M0R6T4	M0R6T4	M0R6T4_RAT	Mms19	MMS19 nucleotide excision repair protein	1	YHPLSASLTAR	YHPLSASLTAR	3	YHPLSASLTAR3	7276.31	6660.19	7196.46
P29147	P29147	BDH_RAT	Bdh1	D-beta-hydroxybutyrate dehydrogenase, mitochondrial	1	YHPMDYYWWLR	YHPMDYYWWLR	3	YHPMDYYWWLR3	19650.1	21046.3	10816.1
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	YHPQALIYPLTVASK	YHPQALIYPLTVASK	2	YHPQALIYPLTVASK2	997.273	10025.5	6027.84
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	YHPQALIYPLTVASK	YHPQALIYPLTVASK	3	YHPQALIYPLTVASK3	30820	23851.5	19213.1
A0A0G2JYJ5	A0A0G2JYJ5	A0A0G2JYJ5_RAT	Ap5z1	Adaptor related protein complex 5 subunit zeta 1	1	YHQDTNVALPLALR	YHQDTNVALPLALR	3	YHQDTNVALPLALR3	5785.9	6336.47	7029.23
O88377	O88377	PI42B_RAT	Pip4k2b	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta	1	YHQFIVECHGNTLLPQFLGMYR	YHQFIVEC(UniMod:4)HGNTLLPQFLGMYR	3	YHQFIVEC(UniMod:4)HGNTLLPQFLGMYR3		6099.42	
O88377	O88377	PI42B_RAT	Pip4k2b	Phosphatidylinositol 5-phosphate 4-kinase type-2 beta	1	YHQFIVECHGNTLLPQFLGMYR	YHQFIVEC(UniMod:4)HGNTLLPQFLGMYR	4	YHQFIVEC(UniMod:4)HGNTLLPQFLGMYR4	38905.5	41421.3	29837.5
D3Z941	D3Z941	D3Z941_RAT	Mars1	Methionine--tRNA ligase, cytoplasmic	1	YHQLLEK	YHQLLEK	2	YHQLLEK2	12979.1	19680.3	13173.7
Q9QZA6	Q9QZA6	CD151_RAT	Cd151	CD151 antigen	1	YHQSGHEGVTNAVDK	YHQSGHEGVTNAVDK	2	YHQSGHEGVTNAVDK2	38385.7		37933.1
Q9QZA6	Q9QZA6	CD151_RAT	Cd151	CD151 antigen	1	YHQSGHEGVTNAVDK	YHQSGHEGVTNAVDK	3	YHQSGHEGVTNAVDK3	36945.9		51958.1
Q9QZA6	Q9QZA6	CD151_RAT	Cd151	CD151 antigen	1	YHQSGHEGVTNAVDK	YHQSGHEGVTNAVDK	4	YHQSGHEGVTNAVDK4	85463.9		91293.9
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	YHQYIVECHGVTLLPQFLGMYR	YHQYIVEC(UniMod:4)HGVTLLPQFLGMYR	3	YHQYIVEC(UniMod:4)HGVTLLPQFLGMYR3	7724.87	2893.62	7351.25
Q9R0I8	Q9R0I8	PI42A_RAT	Pip4k2a	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	1	YHQYIVECHGVTLLPQFLGMYR	YHQYIVEC(UniMod:4)HGVTLLPQFLGMYR	4	YHQYIVEC(UniMod:4)HGVTLLPQFLGMYR4	16282.8	16488.3	17699.2
M0RC99	A1L1J8;M0RC99;B0BNK1	RAB5A_RAT	Rab5a	Ras-related protein Rab-5A	0	YHSLAPMYYR	YHSLAPMYYR	2	YHSLAPMYYR2	63311.1	66547.8	70376.4
M0RC99	A1L1J8;M0RC99;B0BNK1	RAB5A_RAT	Rab5a	Ras-related protein Rab-5A	0	YHSLAPMYYR	YHSLAPMYYR	3	YHSLAPMYYR3	201486	200141	284601
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	YHSQYHTVAGSDIK	YHSQYHTVAGSDIK	3	YHSQYHTVAGSDIK3	9126.17	12304.7	9168.99
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	YHSQYHTVAGSDIK	YHSQYHTVAGSDIK	4	YHSQYHTVAGSDIK4	3909.54	4253.52	8930.35
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	YHSVSTETPHER	YHSVSTETPHER	2	YHSVSTETPHER2	3760.33		2749.48
A0A8I5ZMX5	A0A8I5ZMX5	A0A8I5ZMX5_RAT	Tbc1d1	TBC1 domain family member 1	1	YHSVSTETPHER	YHSVSTETPHER	3	YHSVSTETPHER3	16098.6		15744.4
D4A7B6	D4A7B6	D4A7B6_RAT	Tmem87b	Transmembrane protein 87B	1	YHTCHNEYPELEEELFQK	YHTC(UniMod:4)HNEYPELEEELFQK	3	YHTC(UniMod:4)HNEYPELEEELFQK3	5934.63		
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	YHTEIVFAR	YHTEIVFAR	2	YHTEIVFAR2	37776.8	46586.3	48705.6
D3ZHR2	D3ZHR2	ABCD1_RAT	Abcd1	ATP-binding cassette sub-family D member 1	1	YHTHLLQFDGEGGWK	YHTHLLQFDGEGGWK	3	YHTHLLQFDGEGGWK3		6830.15	
A7VJC2	A7VJC2;A0A8I5Y7P1	ROA2_RAT	Hnrnpa2b1	Heterogeneous nuclear ribonucleoproteins A2/B1	0	YHTINGHNAEVR	YHTINGHNAEVR	2	YHTINGHNAEVR2	44502.3	5503.53	
A7VJC2	A7VJC2;A0A8I5Y7P1	ROA2_RAT	Hnrnpa2b1	Heterogeneous nuclear ribonucleoproteins A2/B1	0	YHTINGHNAEVR	YHTINGHNAEVR	3	YHTINGHNAEVR3	587425	103430	28506.4
Q6URK4	D4A6A2;F1M6C7;Q6URK4;A0A8I6A4C1	ROA3_RAT	Hnrnpa3	Heterogeneous nuclear ribonucleoprotein A3	0	YHTINGHNCEVK	YHTINGHNC(UniMod:4)EVK	2	YHTINGHNC(UniMod:4)EVK2	2853.62		
Q6URK4	D4A6A2;F1M6C7;Q6URK4;A0A8I6A4C1	ROA3_RAT	Hnrnpa3	Heterogeneous nuclear ribonucleoprotein A3	0	YHTINGHNCEVK	YHTINGHNC(UniMod:4)EVK	3	YHTINGHNC(UniMod:4)EVK3	11745.4		
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	YHTQIHVR	YHTQIHVR	2	YHTQIHVR2	20842.2	14095.7	14545.2
P34058	P34058	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	1	YHTSQSGDEMTSLSEYVSR	YHTSQSGDEMTSLSEYVSR	3	YHTSQSGDEMTSLSEYVSR3	719121	866942	881492
P04256	A0A8I6GJN1;P04256	ROA1_RAT	Hnrnpa1	Heterogeneous nuclear ribonucleoprotein A1	0	YHTVNGHNCEVR	YHTVNGHNC(UniMod:4)EVR	3	YHTVNGHNC(UniMod:4)EVR3			9285.17
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	YHVAAAQAK	YHVAAAQAK	1	YHVAAAQAK1	1388.39		
Q66HA5	Q66HA5	C2D1A_RAT	Cc2d1a	Coiled-coil and C2 domain-containing protein 1A	1	YHVAAAQAK	YHVAAAQAK	2	YHVAAAQAK2	22835.1		65330.1
D3ZZ21	D3ZZ21	D3ZZ21_RAT	Ndufb6	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6	1	YHVATKPYAIVGTKPR	YHVATKPYAIVGTKPR	4	YHVATKPYAIVGTKPR4	16944.7	22320.3	15722.3
Q496Z1	Q496Z1	Q496Z1_RAT	Bicd2	BICD cargo adaptor 2	1	YHVAVAEAGELR	YHVAVAEAGELR	3	YHVAVAEAGELR3	10055.9	11127.6	11701.5
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	YHVDTQMWTILK	YHVDTQMWTILK	2	YHVDTQMWTILK2	13731.9	8779.48	
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	YHVDTQMWTILK	YHVDTQMWTILK	3	YHVDTQMWTILK3	14296.4	16304.5	14888.2
Q5XIN4	Q5XIN4	Q5XIN4_RAT	Mtmr9	Myotubularin related protein 9	1	YHVLQESLIK	YHVLQESLIK	2	YHVLQESLIK2	58331.8	56952.4	55069
Q5XIN4	Q5XIN4	Q5XIN4_RAT	Mtmr9	Myotubularin related protein 9	1	YHVLQESLIK	YHVLQESLIK	3	YHVLQESLIK3	1.4969e+06	1.61589e+06	659621
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	YHVPVVVVPEGSASDTQEQAILR	YHVPVVVVPEGSASDTQEQAILR	3	YHVPVVVVPEGSASDTQEQAILR3	87793.2	97074.2	98270.7
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	YHVPVVVVPEGSASDTQEQAILR	YHVPVVVVPEGSASDTQEQAILR	4	YHVPVVVVPEGSASDTQEQAILR4	1983.08	1358.91	5190
D4A7Z0	D4A7Z0	D4A7Z0_RAT	Wdtc1	WD and tetratricopeptide repeats 1	1	YHVTDPFIR	YHVTDPFIR	3	YHVTDPFIR3	6973.04	6169.04	5955.77
Q5FVF4	Q5FVF4	TM7S3_RAT	Tm7sf3	Transmembrane 7 superfamily member 3	1	YHVYQYFLPEGDLTEASLLQHLQR	YHVYQYFLPEGDLTEASLLQHLQR	4	YHVYQYFLPEGDLTEASLLQHLQR4	5126.44	10672.5	
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	YHWQSHNVK	YHWQSHNVK	3	YHWQSHNVK3	4510.64		5192.61
B0BNM1	B0BNM1	NNRE_RAT	Naxe	NAD(P)H-hydrate epimerase	1	YHYLGGR	YHYLGGR	2	YHYLGGR2	37158	29837.6	31545.1
Q66H94	Q66H94	FKBP9_RAT	Fkbp9	Peptidyl-prolyl cis-trans isomerase FKBP9	1	YHYVGTFLDGQK	YHYVGTFLDGQK	3	YHYVGTFLDGQK3	11687.4	16913.8	17631.4
A1KQY6	A1KQY6	A1KQY6_RAT	St8sia4	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	1	YHYYDDLK	YHYYDDLK	2	YHYYDDLK2	12355.4	13435.2	7713.67
Q07977	Q07977	SIA8B_RAT	St8sia2	Alpha-2,8-sialyltransferase 8B	1	YHYYDSLK	YHYYDSLK	2	YHYYDSLK2	4168.02	4523.19	5604.02
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	YIAAQGPR	YIAAQGPR	2	YIAAQGPR2	122492	116091	124714
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	YIAAQGPRDETVDDFWK	YIAAQGPRDETVDDFWK	3	YIAAQGPRDETVDDFWK3	74929.4	64718.8	89197.1
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	YIAEAVASIVEAK	YIAEAVASIVEAK	2	YIAEAVASIVEAK2	12506.6	9457.48	7883.35
A0A0U1RRY8	A0A0U1RRY8	A0A0U1RRY8_RAT	Upf2	UPF2, regulator of nonsense mediated mRNA decay	1	YIAEAVASIVEAK	YIAEAVASIVEAK	3	YIAEAVASIVEAK3		5307.94	2149.85
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	YIAELLK	YIAELLK	2	YIAELLK2	16096.2	19073.8	12389.4
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	YIAELLKK	YIAELLKK	2	YIAELLKK2	10607.1	24967	16272.3
Q9JMJ4	Q9JMJ4	PRP19_RAT	Prpf19	Pre-mRNA-processing factor 19	1	YIAENGTDPINNQPLSEEQLIDIK	YIAENGTDPINNQPLSEEQLIDIK	3	YIAENGTDPINNQPLSEEQLIDIK3	2243.92		
Q9ES21	Q9ES21	SAC1_RAT	Sacm1l	Phosphatidylinositol-3-phosphatase SAC1	1	YIAFDFHK	YIAFDFHK	2	YIAFDFHK2	173876	148389	169507
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	YIAITMMK	YIAITMMK	2	YIAITMMK2	33463.4	27451.9	31956.6
P50399	P50399	GDIB_RAT	Gdi2	Rab GDP dissociation inhibitor beta	1	YIAIVSTTVETK	YIAIVSTTVETK	2	YIAIVSTTVETK2	14435.8	11742.6	12320.6
P16975	P16975	SPRC_RAT	Sparc	SPARC	1	YIALEEWAGCFGIK	YIALEEWAGC(UniMod:4)FGIK	2	YIALEEWAGC(UniMod:4)FGIK2	119870	94309.5	108236
P16975	P16975	SPRC_RAT	Sparc	SPARC	1	YIALEEWAGCFGIK	YIALEEWAGC(UniMod:4)FGIK	3	YIALEEWAGC(UniMod:4)FGIK3	36683.2	21747.8	27539.6
P58751	P58751	RELN_RAT	Reln	Reelin	1	YIALEMPLK	YIALEMPLK	2	YIALEMPLK2	424583	386848	511113
Q63616	Q63616	VP33B_RAT	Vps33b	Vacuolar protein sorting-associated protein 33B	1	YIANLVNADK	YIANLVNADK	2	YIANLVNADK2	23270.5	18161.3	13154.9
P25235	P25235	RPN2_RAT	Rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	1	YIANTVELR	YIANTVELR	2	YIANTVELR2	263565	242053	293954
P16975	P16975	SPRC_RAT	Sparc	SPARC	1	YIAPCLDSELTEFPLR	YIAPC(UniMod:4)LDSELTEFPLR	2	YIAPC(UniMod:4)LDSELTEFPLR2	66528.8	70985.4	71323.8
P16975	P16975	SPRC_RAT	Sparc	SPARC	1	YIAPCLDSELTEFPLR	YIAPC(UniMod:4)LDSELTEFPLR	3	YIAPC(UniMod:4)LDSELTEFPLR3	48164.1	66699.3	71174.2
P30839	P30839	AL3A2_RAT	Aldh3a2	Aldehyde dehydrogenase family 3 member A2	1	YIAPTILTDVDPNSK	YIAPTILTDVDPNSK	2	YIAPTILTDVDPNSK2	33512	33833.2	25603
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	YIAQAYDKPR	YIAQAYDKPR	2	YIAQAYDKPR2	5735.14	4839.35	4326.81
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	YIAQAYDKPR	YIAQAYDKPR	3	YIAQAYDKPR3	39644.3	45520.7	49969.4
A0A8I6A4U0	P20767;A0A8I6A4U0;A0A8I5ZZL6	A0A8I6A4U0_RAT	ENSRNOG00000064589	Ig-like domain-containing protein	0	YIASSFLR	YIASSFLR	2	YIASSFLR2	6.78182e+06	6.46933e+06	6.84851e+06
A0A8I6GKW1	A0A8I6GKW1	A0A8I6GKW1_RAT	Pym1	PYM homolog 1, exon junction complex associated factor	1	YIASTQRPDGTWR	YIASTQRPDGTWR	3	YIASTQRPDGTWR3	16816	22276.5	21011.7
A0A8I5YC36	A0A8I5YC36	A0A8I5YC36_RAT	Ranbp2	RAN binding protein 2	1	YIASVQGSAPSPR	YIASVQGSAPSPR	2	YIASVQGSAPSPR2	1533.26	5675.79	3589.44
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	YIATDFTLK	YIATDFTLK	2	YIATDFTLK2	51390.6	61222.9	49200.5
A0A8I6A4N7;A0A8I6GDH0	A0A8I6GDH0;A0A8I6A4N7	A0A8I6A4N7_RAT;A0A8I6GDH0_RAT	ENSRNOG00000068921;ENSRNOG00000069405	Ig-like domain-containing protein	0	YIAWYQQK	YIAWYQQK	2	YIAWYQQK2	51989.6	31784.5	42009
A0A8I6A4N7;A0A8I6GDH0	A0A8I6GDH0;A0A8I6A4N7	A0A8I6A4N7_RAT;A0A8I6GDH0_RAT	ENSRNOG00000068921;ENSRNOG00000069405	Ig-like domain-containing protein	0	YIAWYQQKPGK	YIAWYQQKPGK	2	YIAWYQQKPGK2	26577	23705	23086.5
A0A8I6A4N7;A0A8I6GDH0	A0A8I6GDH0;A0A8I6A4N7	A0A8I6A4N7_RAT;A0A8I6GDH0_RAT	ENSRNOG00000068921;ENSRNOG00000069405	Ig-like domain-containing protein	0	YIAWYQQKPGK	YIAWYQQKPGK	3	YIAWYQQKPGK3	264984	186709	230700
D3ZMA2	D3ZMA2	D3ZMA2_RAT	Mtmr14	Myotubularin related protein 14	1	YICDLMVENK	YIC(UniMod:4)DLMVENK	2	YIC(UniMod:4)DLMVENK2	7472.64	11441.9	7791.61
D3ZMA2	D3ZMA2	D3ZMA2_RAT	Mtmr14	Myotubularin related protein 14	1	YICDLMVENKK	YIC(UniMod:4)DLMVENKK	3	YIC(UniMod:4)DLMVENKK3	4095.92		3404.3
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	YICQKPSIQK	YIC(UniMod:4)QKPSIQK	2	YIC(UniMod:4)QKPSIQK2	7351.59	4614.08	7837.82
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	YICQKPSIQK	YIC(UniMod:4)QKPSIQK	3	YIC(UniMod:4)QKPSIQK3	64698	85916.5	65322.7
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	YICRPGYEPATR	YIC(UniMod:4)RPGYEPATR	2	YIC(UniMod:4)RPGYEPATR2	747512	871478	796476
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	YICRPGYEPATR	YIC(UniMod:4)RPGYEPATR	3	YIC(UniMod:4)RPGYEPATR3	2.88992e+07	3.22578e+07	3.04979e+07
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	YICRPGYEPATRQPMTVICQK	YIC(UniMod:4)RPGYEPATRQPMTVIC(UniMod:4)QK	4	YIC(UniMod:4)RPGYEPATRQPMTVIC(UniMod:4)QK4	15452.6	23172.5	59271.5
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	YICTTSAIQNR	YIC(UniMod:4)TTSAIQNR	2	YIC(UniMod:4)TTSAIQNR2	43136	29457.7	33516.3
D3ZAI6	D3ZAI6	D3ZAI6_RAT	Nt5dc3	5'-nucleotidase domain containing 3	1	YICYAEQTR	YIC(UniMod:4)YAEQTR	2	YIC(UniMod:4)YAEQTR2	14072.4	20054.3	8169.78
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	YIDDKDVFQK	YIDDKDVFQK	3	YIDDKDVFQK3	22393.6	29425.5	29403
P34058	P82995;P34058;A0A8I5ZQP6;A0A8I5ZRY7	HS90B_RAT	Hsp90ab1	Heat shock protein HSP 90-beta	0	YIDQEELNK	YIDQEELNK	2	YIDQEELNK2	2.94942e+06	3.41961e+06	3.59127e+06
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	YIDSTDLEPSTLQEEPVR	YIDSTDLEPSTLQEEPVR	3	YIDSTDLEPSTLQEEPVR3	76511.3	109130	109421
F7F0L0	F7F0L0	F7F0L0_RAT	Ctps1	CTP synthase	1	YIDSTDLEPSTLQEEPVRYHEAWQK	YIDSTDLEPSTLQEEPVRYHEAWQK	4	YIDSTDLEPSTLQEEPVRYHEAWQK4	46372	73652	52039.3
B5DFC3	B5DFC3	B5DFC3_RAT	Sec23a	Protein transport protein SEC23	1	YIDTEHGGSQAR	YIDTEHGGSQAR	2	YIDTEHGGSQAR2	1816.32		
A0A096MJT6	A0A096MJT6	A0A096MJT6_RAT	Bltp1	Similar to RIKEN cDNA D630029K19	1	YIEAMVHCASTR	YIEAMVHC(UniMod:4)ASTR	3	YIEAMVHC(UniMod:4)ASTR3	6076.11	6787.05	4864.95
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	YIEDEDYYK	YIEDEDYYK	2	YIEDEDYYK2	56879.7	47212.8	53262.7
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	YIEDKDVFQK	YIEDKDVFQK	2	YIEDKDVFQK2	4593.76	7569.15	4363.8
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	YIEDKDVFQK	YIEDKDVFQK	3	YIEDKDVFQK3	28101.9	30467.1	22338.1
Q5XIN6	Q5XIN6	LETM1_RAT	Letm1	Mitochondrial proton/calcium exchanger protein	1	YIEESTASK	YIEESTASK	2	YIEESTASK2	129453	121820	137471
G3V9R2	Q5FVP9;G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	0	YIEGQSAK	YIEGQSAK	1	YIEGQSAK1	12667.9		8050.44
G3V9R2	Q5FVP9;G3V9R2	G3V9R2_RAT	Cfh	Complement factor H	0	YIEGQSAK	YIEGQSAK	2	YIEGQSAK2	370358		350693
P70569	P70569;Q9QYF3	MYO5B_RAT	Myo5b	Unconventional myosin-Vb	0	YIEIGFDK	YIEIGFDK	2	YIEIGFDK2	5500.93	8974.84	6075.37
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	YIEIYVQK	YIEIYVQK	2	YIEIYVQK2	192876	228938	335487
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	YIELLTR	YIELLTR	2	YIELLTR2	69851.4	63918.5	63488.7
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	YIEQATVHSSMNEMLEEGHDYAVMLYTWR	YIEQATVHSSMNEMLEEGHDYAVMLYTWR	4	YIEQATVHSSMNEMLEEGHDYAVMLYTWR4	7273.64	6911.72	8457.27
F1LNQ9	F1LNQ9	F1LNQ9_RAT	Clasp1	Cytoplasmic linker associated protein 1	1	YIESLAR	YIESLAR	2	YIESLAR2	40669.4	36006.8	35846.6
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	YIESPVLFFR	YIESPVLFFR	2	YIESPVLFFR2	3669.88	5492.48	6719.43
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	YIETDPANR	YIETDPANR	2	YIETDPANR2	3.00413e+06	2.6496e+06	3.00754e+06
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	YIETDPANRDR	YIETDPANRDR	2	YIETDPANRDR2	104154	91045	100140
Q68FP1	Q68FP1	GELS_RAT	Gsn	Gelsolin	1	YIETDPANRDR	YIETDPANRDR	3	YIETDPANRDR3	1.85121e+06	2.01691e+06	2.23605e+06
Q99JD4	Q99JD4	CLAP2_RAT	Clasp2	CLIP-associating protein 2	1	YIETLAK	YIETLAK	2	YIETLAK2	59917	58099.1	51602.4
O35303	O35303	DNM1L_RAT	Dnm1l	Dynamin-1-like protein	1	YIETSELCGGAR	YIETSELC(UniMod:4)GGAR	2	YIETSELC(UniMod:4)GGAR2	51583.3	31736.6	36293
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	YIEYVCDMVAEEPITPHSK	YIEYVC(UniMod:4)DMVAEEPITPHSK	3	YIEYVC(UniMod:4)DMVAEEPITPHSK3	11537.6	17299.7	15754.1
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	YIFHNFMER	YIFHNFMER	2	YIFHNFMER2	326667	277105	266655
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	YIFHNFMER	YIFHNFMER	3	YIFHNFMER3	1.8639e+06	1.88791e+06	1.9948e+06
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	YIFTSLDKPSVVSLQNLIVR	YIFTSLDKPSVVSLQNLIVR	3	YIFTSLDKPSVVSLQNLIVR3	98013.4	130245	121236
Q5U2X7	Q5U2X7	TIM21_RAT	Timm21	Mitochondrial import inner membrane translocase subunit Tim21	1	YIFVDVAPK	YIFVDVAPK	2	YIFVDVAPK2	7458.07	7053.25	
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	YIFVGTLK	YIFVGTLK	2	YIFVGTLK2	57695.1	54611.4	66431.9
D3ZZB2	D3ZZB2	D3ZZB2_RAT	Pex1	Peroxisomal ATPase PEX1	1	YIGASEQAVR	YIGASEQAVR	2	YIGASEQAVR2	14056.7	9670.21	11185.4
A0A8I5ZU65	A0A8I5ZU65	A0A8I5ZU65_RAT	Psmc6	Proteasome 26S subunit, ATPase 6	1	YIGESAR	YIGESAR	2	YIGESAR2	196949	187111	173050
D3ZCD0	D3ZCD0	D3ZCD0_RAT	Tek	receptor protein-tyrosine kinase	1	YIGGNLFTSAFTR	YIGGNLFTSAFTR	2	YIGGNLFTSAFTR2	15751.3	11120.3	14751
Q9JHW1	Q9JHW1	CBPD_RAT	Cpd	Carboxypeptidase D	1	YIGNMHGNEVVGR	YIGNMHGNEVVGR	3	YIGNMHGNEVVGR3	6892.41	7512.23	7964.1
F7EZW5	F7EZW5	F7EZW5_RAT	Tmem161a	Transmembrane protein 161A	1	YIHPSEEELR	YIHPSEEELR	2	YIHPSEEELR2		4880.4	
F7EZW5	F7EZW5	F7EZW5_RAT	Tmem161a	Transmembrane protein 161A	1	YIHPSEEELR	YIHPSEEELR	3	YIHPSEEELR3	4902.18	6427.71	1037.09
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	YIHSADIIHR	YIHSADIIHR	2	YIHSADIIHR2	62757.3	40437	35917.3
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	YIHSADIIHR	YIHSADIIHR	3	YIHSADIIHR3	340924	331812	309705
P63086	Q63454;P27704;P21708;P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	0	YIHSANVLHR	YIHSANVLHR	2	YIHSANVLHR2	23036.7	24160.2	8487.13
P63086	Q63454;P27704;P21708;P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	0	YIHSANVLHR	YIHSANVLHR	3	YIHSANVLHR3	54072	57915.8	31550.3
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	YIIEELNVR	YIIEELNVR	2	YIIEELNVR2	83999.7	73411.5	80053.5
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	YIIGMLER	YIIGMLER	2	YIIGMLER2	32054.2	27891.3	28577.1
P61107	P61107	RAB14_RAT	Rab14	Ras-related protein Rab-14	1	YIIIGDMGVGK	YIIIGDMGVGK	2	YIIIGDMGVGK2	271331	289104	267867
P05712	Q3B7V5;P05712	RAB2A_RAT	Rab2a	Ras-related protein Rab-2A	0	YIIIGDTGVGK	YIIIGDTGVGK	2	YIIIGDTGVGK2	256788	244930	273593
Q2TA68	Q2TA68	OPA1_RAT	Opa1	Dynamin-like 120 kDa protein, mitochondrial	1	YIILGSAVGGGYTAK	YIILGSAVGGGYTAK	2	YIILGSAVGGGYTAK2	26787.6	20070.1	23447.8
A0A8I6A427	A0A8I6A427	A0A8I6A427_RAT	Sdk1	Sidekick cell adhesion molecule 1	1	YIIPSLQK	YIIPSLQK	2	YIIPSLQK2	25233.2	25194.7	23523.7
Q62786	Q62786	FPRP_RAT	Ptgfrn	Prostaglandin F2 receptor negative regulator	1	YIISLDQDSVVK	YIISLDQDSVVK	2	YIISLDQDSVVK2	7096.18	6173.27	5320.38
P04041	P04041	GPX1_RAT	Gpx1	Glutathione peroxidase 1	1	YIIWSPVCR	YIIWSPVC(UniMod:4)R	2	YIIWSPVC(UniMod:4)R2	127987	131039	117990
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	YILDSPILQQFQHNIHLAR	YILDSPILQQFQHNIHLAR	3	YILDSPILQQFQHNIHLAR3	59734.2	53070.4	42829.5
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	YILDSPILQQFQHNIHLAR	YILDSPILQQFQHNIHLAR	4	YILDSPILQQFQHNIHLAR4	127888	108430	106515
A0A8I5Y7I2	A0A8I5Y7I2;A0A8I6A6D0	A0A8I5Y7I2_RAT	Kctd12	Potassium channel tetramerization domain containing 12	0	YILDYLR	YILDYLR	2	YILDYLR2	87226.8	71742.8	74715.8
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	YILISKPLVWTER	YILISKPLVWTER	3	YILISKPLVWTER3	16218.5	22483.3	11704.5
Q8R4G8	D4ADH5;Q8R4G8	KCTD1_RAT	Kctd1	BTB/POZ domain-containing protein KCTD1	0	YILNFLR	YILNFLR	2	YILNFLR2		11007.8	10957.6
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	YILNPLFR	YILNPLFR	2	YILNPLFR2	32322.2	42425.2	33359.6
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	YILQGFFR	YILQGFFR	2	YILQGFFR2	8233.42	4495	12839.2
A0A8I6A665	A0A8I6A665	A0A8I6A665_RAT	Aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing	1	YILQGFFRPSETVGDLR	YILQGFFRPSETVGDLR	3	YILQGFFRPSETVGDLR3	72625.2	54778.5	29674.8
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	YILQGVTSWGLGCAR	YILQGVTSWGLGC(UniMod:4)AR	2	YILQGVTSWGLGC(UniMod:4)AR2	311423	285261	254145
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	YILQGVTSWGLGCAR	YILQGVTSWGLGC(UniMod:4)AR	3	YILQGVTSWGLGC(UniMod:4)AR3	96495.2	88182.4	65588.8
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	YILQGVTSWGLGCARPNK	YILQGVTSWGLGC(UniMod:4)ARPNK	3	YILQGVTSWGLGC(UniMod:4)ARPNK3	234145	256799	241561
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	YILQGVTSWGLGCARPNKPGVYVR	YILQGVTSWGLGC(UniMod:4)ARPNKPGVYVR	3	YILQGVTSWGLGC(UniMod:4)ARPNKPGVYVR3	42624.7		33821.1
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	YILQGVTSWGLGCARPNKPGVYVR	YILQGVTSWGLGC(UniMod:4)ARPNKPGVYVR	4	YILQGVTSWGLGC(UniMod:4)ARPNKPGVYVR4	440833	414725	394119
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	YILQLAQEYCGDCK	YILQLAQEYC(UniMod:4)GDC(UniMod:4)K	2	YILQLAQEYC(UniMod:4)GDC(UniMod:4)K2	21327	21429.4	20752.4
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	YILQLAQEYCGDCK	YILQLAQEYC(UniMod:4)GDC(UniMod:4)K	3	YILQLAQEYC(UniMod:4)GDC(UniMod:4)K3	6709.11	3226.07	8289.45
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	YILSDSSPVPEFPVAYLTSENR	YILSDSSPVPEFPVAYLTSENR	3	YILSDSSPVPEFPVAYLTSENR3	10341.3	5438.89	10632.3
P23593	P23593	APOD_RAT	Apod	Apolipoprotein D	1	YILTSNDIDIAK	YILTSNDIDIAK	2	YILTSNDIDIAK2	517779	496409	545853
Q5U2N0	Q5U2N0;F7F0L0	PYRG2_RAT	Ctps2	CTP synthase 2	0	YILVTGGVISGIGK	YILVTGGVISGIGK	2	YILVTGGVISGIGK2	282932	234574	218282
Q64165	Q64165	Q64165_RAT	Gcnt1	Glucosaminyl (N-acetyl) transferase 1	1	YIMEPLTK	YIMEPLTK	2	YIMEPLTK2	21983.8	25467.1	27816
Q63356	Q63356	MYO1E_RAT	Myo1e	Unconventional myosin-Ie	1	YIMSYVSR	YIMSYVSR	2	YIMSYVSR2	89617.7	79713	108327
Q04400	Q04400	ADCY5_RAT	Adcy5	Adenylate cyclase type 5	1	YINEHSFNNFQMK	YINEHSFNNFQMK	3	YINEHSFNNFQMK3	11946.4	9168.12	13709.8
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	YINENLIINTDELGR	YINENLIINTDELGR	2	YINENLIINTDELGR2	214998	190230	176380
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	YINENLIINTDELGR	YINENLIINTDELGR	3	YINENLIINTDELGR3	27207.5	23327.7	25328.6
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	YINENLIINTDELGRDCLINAAK	YINENLIINTDELGRDC(UniMod:4)LINAAK	3	YINENLIINTDELGRDC(UniMod:4)LINAAK3	5777.62	10864.9	14666.7
A0A8I5ZS17	A0A8I5ZS17	A0A8I5ZS17_RAT	Snx25	Sorting nexin 25	1	YINQLTVAK	YINQLTVAK	2	YINQLTVAK2	7403.94	5261.01	5328.39
D3ZCT7	D3ZCT7	D3ZCT7_RAT	Sec23b	Protein transport protein SEC23	1	YINTEHGGSQAR	YINTEHGGSQAR	3	YINTEHGGSQAR3			19750.9
Q498C8	Q498C8	RER1_RAT	Rer1	Protein RER1	1	YIPFTHGK	YIPFTHGK	2	YIPFTHGK2	94269.3	80051.1	74923.2
A0A8I6AGS4	A0A8I6AGS4	A0A8I6AGS4_RAT	Abi3bp	ABI family member 3 binding protein	1	YIPKPDNKPCSITDSVR	YIPKPDNKPC(UniMod:4)SITDSVR	3	YIPKPDNKPC(UniMod:4)SITDSVR3	15965.1	20862.7	15541.8
A0A8I6AGS4	A0A8I6AGS4	A0A8I6AGS4_RAT	Abi3bp	ABI family member 3 binding protein	1	YIPKPDNKPCSITDSVR	YIPKPDNKPC(UniMod:4)SITDSVR	4	YIPKPDNKPC(UniMod:4)SITDSVR4	20766.9	33559.7	18658.3
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	YIQAACK	YIQAAC(UniMod:4)K	1	YIQAAC(UniMod:4)K1	28684.3	30552	
P11442	P11442	CLH1_RAT	Cltc	Clathrin heavy chain 1	1	YIQAACK	YIQAAC(UniMod:4)K	2	YIQAAC(UniMod:4)K2		171151	
A0A8I6ANL9	A0A8I6ANL9	A0A8I6ANL9_RAT	Cdc23	Cell division cycle 23	1	YIQDIYSCGETVEHLEESTAFR	YIQDIYSC(UniMod:4)GETVEHLEESTAFR	3	YIQDIYSC(UniMod:4)GETVEHLEESTAFR3	6380.57		3006.24
P61314	D3ZF52;P61314;A0A8I5ZY58;A0A8I6A471	RL15_RAT	Rpl15	Large ribosomal subunit protein eL15	0	YIQELWR	YIQELWR	2	YIQELWR2	43453.3	59639.8	51750.3
Q6AYQ1	F1M362;Q6AYQ1	GOGA7_RAT	Golga7	Golgin subfamily A member 7	0	YIQEQNEK	YIQEQNEK	2	YIQEQNEK2	23380.9		14637.2
Q5XI73	Q5XI73	GDIR1_RAT	Arhgdia	Rho GDP-dissociation inhibitor 1	1	YIQHTYR	YIQHTYR	2	YIQHTYR2	102020	127003	200492
F1LP64	F1LP64	TRIPC_RAT	Trip12	E3 ubiquitin-protein ligase TRIP12	1	YIQNLQGLFALPFGR	YIQNLQGLFALPFGR	2	YIQNLQGLFALPFGR2	7699.21	11348.4	10534.7
Q5RJP5	Q5RJP5	Q5RJP5_RAT	Isg20	Interferon stimulated exonuclease 20	1	YIQPEGEITDYR	YIQPEGEITDYR	2	YIQPEGEITDYR2	16051.3	16548.5	12689.5
F1LWZ3	F1LWZ3	F1LWZ3_RAT	Rhbdf2	Inactive rhomboid protein	1	YIQQENFWIGPSSIDLIHLGAK	YIQQENFWIGPSSIDLIHLGAK	3	YIQQENFWIGPSSIDLIHLGAK3	3507.97	6605.83	4672.48
A0A8I6AI88	A0A8I6AI88	A0A8I6AI88_RAT	Chpf2	Hexosyltransferase	1	YIQTELGSR	YIQTELGSR	2	YIQTELGSR2	9593.46		15202.9
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	YIQTYEGFLHVTGEHFVNSWVR	YIQTYEGFLHVTGEHFVNSWVR	4	YIQTYEGFLHVTGEHFVNSWVR4	10112.2	5717.58	11632.8
A0A0G2K8F9	A0A0G2K8F9;D3Z8L5	A0A0G2K8F9_RAT	Pum2	Pumilio RNA-binding family member 2	0	YISAAPGAEAK	YISAAPGAEAK	2	YISAAPGAEAK2	15907.4	13840.9	14573.8
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	YISDALR	YISDALR	2	YISDALR2	96232.2	102315	102398
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	YISEIAITTRPHQIVMPSAIER	YISEIAITTRPHQIVMPSAIER	3	YISEIAITTRPHQIVMPSAIER3	3906.99	9679.48	2964.7
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	YISEIAITTRPHQIVMPSAIER	YISEIAITTRPHQIVMPSAIER	4	YISEIAITTRPHQIVMPSAIER4	25778.9	34524.9	29676.9
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	YISFLWQVADLGSSLNMPPLR	YISFLWQVADLGSSLNMPPLR	3	YISFLWQVADLGSSLNMPPLR3	5615	944.531	
Q64649	Q64649	KPB1_RAT	Phka1	Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform	1	YISGILR	YISGILR	2	YISGILR2	29343.4		
A0A8I5ZWF0	A0A8I5ZWF0	A0A8I5ZWF0_RAT	Phka2	Phosphorylase b kinase regulatory subunit	1	YISGLLR	YISGLLR	2	YISGLLR2		64848.3	27527.3
D3ZUM4	D3ZUM4	D3ZUM4_RAT	Glb1	Beta-galactosidase	1	YISGSIHYFR	YISGSIHYFR	3	YISGSIHYFR3	50261.6	45163	44246.6
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	YISGTVR	YISGTVR	2	YISGTVR2	73393.8	92171.1	74101.4
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	YISHPYFSK	YISHPYFSK	2	YISHPYFSK2	16212	12294.9	17329.7
F1LVT9	F1LVT9	F1LVT9_RAT	RGD1559575	Similar to novel protein	1	YISHPYFSK	YISHPYFSK	3	YISHPYFSK3	119865	154836	133292
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	YISLSEK	YISLSEK	2	YISLSEK2	44818	57461.9	39807.9
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	YISPDAAKPIPITEAMR	YISPDAAKPIPITEAMR	3	YISPDAAKPIPITEAMR3	24134.1	24206	20799.2
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	YISQCIDEIK	YISQC(UniMod:4)IDEIK	2	YISQC(UniMod:4)IDEIK2	192924	219487	217080
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	YISQCIDEIKQELK	YISQC(UniMod:4)IDEIKQELK	3	YISQC(UniMod:4)IDEIKQELK3	42998.5	61539.2	80100.2
A0A0G2K1E1	A0A0G2K1E1	A0A0G2K1E1_RAT	RT1-A1	RT1 class Ia, locus A1	1	YISVGYVDDTQFVR	YISVGYVDDTQFVR	2	YISVGYVDDTQFVR2	4124.21		5914.43
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	YISYNSYGK	YISYNSYGK	2	YISYNSYGK2	53306.4	52687.7	51116.1
B2RYP8	B2RYP8	B2RYP8_RAT	Tubgcp2	Gamma-tubulin complex component	1	YITAQPLAGR	YITAQPLAGR	2	YITAQPLAGR2	13474.2	19607.9	12033
G3V7W1	G3V7W1	PDCD6_RAT	Pdcd6	Programmed cell death protein 6	1	YITDWQNVFR	YITDWQNVFR	2	YITDWQNVFR2	54152.1	42281.2	41757
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	YITEVSR	YITEVSR	2	YITEVSR2	17360.7	26176.6	13671.2
A0A0G2JVF0	A0A0G2JVF0	A0A0G2JVF0_RAT	Arhgap4	Rho GTPase activating protein 4	1	YITLSEGDEK	YITLSEGDEK	2	YITLSEGDEK2	44011	41817.6	55170.4
Q6AXN3	Q6AXN3	TMED5_RAT	Tmed5	Transmembrane emp24 domain-containing protein 5	1	YITNTDVLEMK	YITNTDVLEMK	2	YITNTDVLEMK2	65525.1	72765.1	58754.8
P04764	M0R5J4;P04764	ENOA_RAT	Eno1	Alpha-enolase	0	YITPDQLADLYK	YITPDQLADLYK	2	YITPDQLADLYK2	320325	316317	375117
Q32Q06	Q32Q06	AP1M1_RAT	Ap1m1	AP-1 complex subunit mu-1	1	YITQNGDYQLR	YITQNGDYQLR	2	YITQNGDYQLR2	56164.1	56722.8	51543.9
Q496Z0	Q496Z0	ELP2_RAT	Elp2	Elongator complex protein 2	1	YIVAVGLESGK	YIVAVGLESGK	2	YIVAVGLESGK2	9743.67	16758.2	6014.34
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	YIVEMTIWEEEKELPPELQR	YIVEMTIWEEEKELPPELQR	3	YIVEMTIWEEEKELPPELQR3	24455.2	24959.4	15542.4
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	YIVHDHCAMK	YIVHDHC(UniMod:4)AMK	2	YIVHDHC(UniMod:4)AMK2	1883	1172.22	
P51556	P51556	DGKA_RAT	Dgka	Diacylglycerol kinase alpha	1	YIVHDHCAMK	YIVHDHC(UniMod:4)AMK	3	YIVHDHC(UniMod:4)AMK3	30089.6	30122.1	22947.9
Q4V8I7	Q4V8I7	LRC8A_RAT	Lrrc8a	Volume-regulated anion channel subunit LRRC8A	1	YIVIDGLR	YIVIDGLR	2	YIVIDGLR2	19427.8	15272.5	24336
A0A8I6GE00	A0A8I6GE00	A0A8I6GE00_RAT	Tut7	RNA uridylyltransferase	1	YIVIEDPFDLNHNLGAGLSR	YIVIEDPFDLNHNLGAGLSR	3	YIVIEDPFDLNHNLGAGLSR3	16443.4	15888.5	11707.8
B0BN86	B0BN86;A0A8I6AHI0	TMM11_RAT	Tmem11	Transmembrane protein 11, mitochondrial	0	YIVIEPTR	YIVIEPTR	2	YIVIEPTR2	67054.8	67393.3	79692.4
O55007	O55007	RGPA1_RAT	Ralgapa1	Ral GTPase-activating protein subunit alpha-1	1	YIVIQVK	YIVIQVK	2	YIVIQVK2	12964.2	21830.7	10752.3
Q5FWS5	Q5FWS5	Q5FWS5_RAT	Loxl1	Lysyl oxidase homolog	1	YIVLESDFTNNVVR	YIVLESDFTNNVVR	2	YIVLESDFTNNVVR2	88665.4	77311.5	73639.8
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	YIVNVYQISEEGK	YIVNVYQISEEGK	2	YIVNVYQISEEGK2	160991	187460	193213
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	YIVNVYQISEEGK	YIVNVYQISEEGK	3	YIVNVYQISEEGK3	685432	943922	871628
P51635	P51635	AK1A1_RAT	Akr1a1	Aldo-keto reductase family 1 member A1	1	YIVPMITVDGK	YIVPMITVDGK	2	YIVPMITVDGK2	36402.7	36761.4	27246.9
A0A8I5ZWS4	A0A8I5ZWS4	A0A8I5ZWS4_RAT	Hook3	Hook microtubule-tethering protein 3	1	YIVSAWYNMGMTLHK	YIVSAWYNMGMTLHK	3	YIVSAWYNMGMTLHK3	6756.96	5443.35	5288.77
P97686	P97686	NRCAM_RAT	Nrcam	Neuronal cell adhesion molecule	1	YIVSGTPTFVPYLIK	YIVSGTPTFVPYLIK	2	YIVSGTPTFVPYLIK2	4582.45	3310.17	6169.32
F7FAB7	F7FAB7	F7FAB7_RAT	Dynlt3	Dynein light chain Tctex-type 3	1	YIVTCAVVQR	YIVTC(UniMod:4)AVVQR	2	YIVTC(UniMod:4)AVVQR2	22972.1	14682.9	10266.8
Q9Z336	Q9Z336	DYLT1_RAT	Dynlt1	Dynein light chain Tctex-type 1	1	YIVTCVIMQK	YIVTC(UniMod:4)VIMQK	2	YIVTC(UniMod:4)VIMQK2	79688	71904.8	74831.8
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	YIVWIEAR	YIVWIEAR	2	YIVWIEAR2	15228.8	15287.4	14025.9
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	YIYDDSSK	YIYDDSSK	2	YIYDDSSK2	171676	141914	168080
D3ZUB0	D3ZUB0	D3ZUB0_RAT	Rcn1	Reticulocalbin 1	1	YIYDNVAK	YIYDNVAK	2	YIYDNVAK2	46730	52561.8	48599.9
F7FAY5	F7FAY5	F7FAY5_RAT	Albfm1	Similar to alpha-fetoprotein	1	YIYEMSR	YIYEMSR	2	YIYEMSR2	441315	508482	509596
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	YIYGCLQK	YIYGC(UniMod:4)LQK	2	YIYGC(UniMod:4)LQK2	19244.4		17526.4
A0A8I6A8Q1	A0A8I6A8Q1	A0A8I6A8Q1_RAT	A2ml1	Alpha-2-macroglobulin-like 1	1	YIYGQPVR	YIYGQPVR	2	YIYGQPVR2	11920	16057	17398.3
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	YIYIMGIQER	YIYIMGIQER	2	YIYIMGIQER2	45115.3	34865.4	45235.9
Q99PS8	Q99PS8	HRG_RAT	Hrg	Histidine-rich glycoprotein	1	YKAENGDFASFR	YKAENGDFASFR	3	YKAENGDFASFR3	14824	17942.7	16732
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	YKAPGVLR	YKAPGVLR	2	YKAPGVLR2	23641.9	26445.4	22285.2
Q62975	Q62975	ZPI_RAT	Serpina10	Protein Z-dependent protease inhibitor	1	YKAVKVPMMYR	YKAVKVPMMYR	3	YKAVKVPMMYR3	12310.9	15932.1	18639.4
Q5U367	Q5U367	PLOD3_RAT	Plod3	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3	1	YKDDDDDQLFYTQLYLDPGLR	YKDDDDDQLFYTQLYLDPGLR	3	YKDDDDDQLFYTQLYLDPGLR3	7216.03	5435.23	6103.44
O08984	O08984	LBR_RAT	Lbr	Delta(14)-sterol reductase LBR	1	YKDGTELELK	YKDGTELELK	3	YKDGTELELK3	11115.4	7022.53	4711.4
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	YKDILPFDHSR	YKDILPFDHSR	2	YKDILPFDHSR2	16274.6	14363.6	8338.17
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	YKDILPFDHSR	YKDILPFDHSR	3	YKDILPFDHSR3	146903	125930	143177
A0A8I6AI94	D4AD48;A0A8I6AI94	A0A8I6AI94_RAT	Dcun1d1	DCN1-like protein	0	YKDPQDENK	YKDPQDENK	2	YKDPQDENK2			5571.54
A0A8I6A9M7	A0A8I6A9M7	A0A8I6A9M7_RAT	Nemf	Nuclear export mediator factor	1	YKDQDDEDRELIMK	YKDQDDEDRELIMK	4	YKDQDDEDRELIMK4		7085.17	7813.15
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	YKDRPESVYFFK	YKDRPESVYFFK	3	YKDRPESVYFFK3	218644	253341	197618
A0A8I6A1N7	A0A8I6A1N7	A0A8I6A1N7_RAT	Prg4	Proteoglycan 4	1	YKDRPESVYFFK	YKDRPESVYFFK	4	YKDRPESVYFFK4	318195	372175	316472
P37285	A0A8I5Y868;P37285	KLC1_RAT	Klc1	Kinesin light chain 1	0	YKEAEPLCK	YKEAEPLC(UniMod:4)K	2	YKEAEPLC(UniMod:4)K2	18669.5	6716.11	20688.9
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	YKEAEPLCQR	YKEAEPLC(UniMod:4)QR	2	YKEAEPLC(UniMod:4)QR2	2971.13	1347.25	2863.7
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	YKEAEPLCQR	YKEAEPLC(UniMod:4)QR	3	YKEAEPLC(UniMod:4)QR3	9674.17	13181.2	15810.7
P36372	P36372	TAP2_RAT	Tap2	Antigen peptide transporter 2	1	YKEALER	YKEALER	2	YKEALER2		1355.2	
Q5XI73	Q5XI73	GDIR1_RAT	Arhgdia	Rho GDP-dissociation inhibitor 1	1	YKEALLGR	YKEALLGR	2	YKEALLGR2	14052.8	11362.3	18917.4
Q62825	Q62825	EXOC3_RAT	Exoc3	Exocyst complex component 3	1	YKEEAQLYK	YKEEAQLYK	3	YKEEAQLYK3	6457.23	7033.75	13110.2
Q99MZ8	Q99MZ8	LASP1_RAT	Lasp1	LIM and SH3 domain protein 1	1	YKEEFEK	YKEEFEK	2	YKEEFEK2	75429.9	43988.9	37929.2
P12749	P12749;D4A1Z2;D4AE42	RL26_RAT	Rpl26	Large ribosomal subunit protein uL24	0	YKEETIEK	YKEETIEK	2	YKEETIEK2	11861.9		
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	YKEEYAVLISEAQAIK	YKEEYAVLISEAQAIK	2	YKEEYAVLISEAQAIK2	2517.08	3490.7	11093
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	YKEEYAVLISEAQAIK	YKEEYAVLISEAQAIK	3	YKEEYAVLISEAQAIK3	172386	226888	114967
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	YKEITLK	YKEITLK	2	YKEITLK2	18718.5	20014.4	14396.9
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	YKELGEK	YKELGEK	1	YKELGEK1	3705.32	2399.39	3703.05
P11598	P11598	PDIA3_RAT	Pdia3	Protein disulfide-isomerase A3	1	YKELGEK	YKELGEK	2	YKELGEK2	181344	148909	167773
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	YKENPDIVNQSQQAQAR	YKENPDIVNQSQQAQAR	3	YKENPDIVNQSQQAQAR3	13979.3	19669.4	19905.6
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	YKENSQMDDKWEK	YKENSQMDDKWEK	3	YKENSQMDDKWEK3	11012.3	9549.23	10080.3
G3V8A5	G3V8A5	G3V8A5_RAT	Vps35	Vacuolar protein sorting-associated protein 35	1	YKENSQMDDKWEK	YKENSQMDDKWEK	4	YKENSQMDDKWEK4	9009.23	4653.29	7080.99
Q91ZW1	Q91ZW1	TFAM_RAT	Tfam	Transcription factor A, mitochondrial	1	YKEQLTPSQLMGLEK	YKEQLTPSQLMGLEK	3	YKEQLTPSQLMGLEK3	96861	152046	90592.5
G3V6S0	G3V6S0	G3V6S0_RAT	Sptbn1	Spectrin beta chain	1	YKEVAELTR	YKEVAELTR	2	YKEVAELTR2	242743	236122	215359
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	YKGQHVPGSPFQFTVGPLGEGGAHK	YKGQHVPGSPFQFTVGPLGEGGAHK	4	YKGQHVPGSPFQFTVGPLGEGGAHK4	12227.3		16814.1
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	YKHPPQTNLLAPK	YKHPPQTNLLAPK	2	YKHPPQTNLLAPK2	3470.78	3904.58	4355.92
P70600	P70600	FAK2_RAT	Ptk2b	Protein-tyrosine kinase 2-beta	1	YKHPPQTNLLAPK	YKHPPQTNLLAPK	3	YKHPPQTNLLAPK3	46683.9	45898.8	49807.5
A0A8I5ZPY8	A0A8I5ZPY8	A0A8I5ZPY8_RAT	Ndufb4	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4	1	YKPAPLAALPNTLDPAEYDVSPETR	YKPAPLAALPNTLDPAEYDVSPETR	3	YKPAPLAALPNTLDPAEYDVSPETR3	49744.4	45295.9	51074.4
A0A8I5ZPY8	A0A8I5ZPY8	A0A8I5ZPY8_RAT	Ndufb4	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4	1	YKPAPLAALPNTLDPAEYDVSPETRK	YKPAPLAALPNTLDPAEYDVSPETRK	4	YKPAPLAALPNTLDPAEYDVSPETRK4		11013.1	10723.8
A0A8I6APG8	A0A8I6APG8	A0A8I6APG8_RAT	LOC120094308	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4	1	YKPAPLATLPSTLNPAEYDVSPETR	YKPAPLATLPSTLNPAEYDVSPETR	3	YKPAPLATLPSTLNPAEYDVSPETR3	10177.1	12308.8	10325.6
P07943	P07943;A0A8I6A068	ALDR_RAT	Akr1b1	Aldo-keto reductase family 1 member B1	0	YKPAVNQIECHPYLTQEK	YKPAVNQIEC(UniMod:4)HPYLTQEK	3	YKPAVNQIEC(UniMod:4)HPYLTQEK3	1502.25		
P07943	P07943;A0A8I6A068	ALDR_RAT	Akr1b1	Aldo-keto reductase family 1 member B1	0	YKPAVNQIECHPYLTQEK	YKPAVNQIEC(UniMod:4)HPYLTQEK	4	YKPAVNQIEC(UniMod:4)HPYLTQEK4	44574.9	9812.55	12459.4
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	YKPESDELTAEK	YKPESDELTAEK	2	YKPESDELTAEK2	890931	840945	903625
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	YKPESDELTAEK	YKPESDELTAEK	3	YKPESDELTAEK3	1.25331e+06	1.55955e+06	1.18781e+06
D3Z8F6	D3Z8F6	D3Z8F6_RAT	Dennd1b	DENN domain containing 1B	1	YKPGEPITFCEESFVK	YKPGEPITFC(UniMod:4)EESFVK	3	YKPGEPITFC(UniMod:4)EESFVK3	1778.63	13762.1	2481.18
Q5FWT9	Q5FWT9	SIKE1_RAT	Sike1	Suppressor of IKBKE 1	1	YKPHILLSQENTQIR	YKPHILLSQENTQIR	3	YKPHILLSQENTQIR3	7417.8	6290.81	14762.8
Q5FWT9	Q5FWT9	SIKE1_RAT	Sike1	Suppressor of IKBKE 1	1	YKPHILLSQENTQIR	YKPHILLSQENTQIR	4	YKPHILLSQENTQIR4	7079.86	2987.17	3612.57
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	YKPLFDYFIK	YKPLFDYFIK	3	YKPLFDYFIK3	22834.4	20007.5	24039.2
D3ZA88	D3ZA88	D3ZA88_RAT	Trim34	Tripartite motif-containing 34	1	YKPQNGYWVIGLQDGSK	YKPQNGYWVIGLQDGSK	3	YKPQNGYWVIGLQDGSK3	3869.04		7425.68
Q7TNZ6	Q7TNZ6	STRAA_RAT	Strada	STE20-related kinase adapter protein alpha	1	YKPTGEYVTVR	YKPTGEYVTVR	3	YKPTGEYVTVR3	9299.44	9478.37	15601.5
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	YKTPDFESTGLYSAMPR	YKTPDFESTGLYSAMPR	3	YKTPDFESTGLYSAMPR3	115170	144620	131472
D3ZBT9	D3ZBT9	D3ZBT9_RAT	Ppp6r3	Protein phosphatase 6, regulatory subunit 3	1	YKYPNISCELLTSDVSQMNDR	YKYPNISC(UniMod:4)ELLTSDVSQMNDR	3	YKYPNISC(UniMod:4)ELLTSDVSQMNDR3	84017	118059	90192.4
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	YLADAEER	YLADAEER	2	YLADAEER2	95720.4	81914.5	92672.6
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	YLADQNNQVR	YLADQNNQVR	2	YLADQNNQVR2	63692.6	60335.2	73925.5
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	YLAEFATGNDR	YLAEFATGNDR	2	YLAEFATGNDR2	1.40999e+06	1.20506e+06	1.25657e+06
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	YLAEFATGNDRK	YLAEFATGNDRK	2	YLAEFATGNDRK2	182151	219243	209984
P62260	P62260	1433E_RAT	Ywhae	14-3-3 protein epsilon	1	YLAEFATGNDRK	YLAEFATGNDRK	3	YLAEFATGNDRK3	1.53071e+06	2.01786e+06	1.80911e+06
P63102	P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	1	YLAEVAAGDDK	YLAEVAAGDDK	2	YLAEVAAGDDK2	7.11652e+06	7.55001e+06	8.2799e+06
P63102	P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	1	YLAEVAAGDDKK	YLAEVAAGDDKK	2	YLAEVAAGDDKK2	779735	612086	683898
P63102	P63102	1433Z_RAT	Ywhaz	14-3-3 protein zeta/delta	1	YLAEVAAGDDKK	YLAEVAAGDDKK	3	YLAEVAAGDDKK3	48934.5	43266.2	4.92525e+06
P68255	P68255	1433T_RAT	Ywhaq	14-3-3 protein theta	1	YLAEVACGDDR	YLAEVAC(UniMod:4)GDDR	2	YLAEVAC(UniMod:4)GDDR2	271741	246048	256664
P68255	P68255	1433T_RAT	Ywhaq	14-3-3 protein theta	1	YLAEVACGDDRK	YLAEVAC(UniMod:4)GDDRK	2	YLAEVAC(UniMod:4)GDDRK2	338057	299953	333841
P68255	P68255	1433T_RAT	Ywhaq	14-3-3 protein theta	1	YLAEVACGDDRK	YLAEVAC(UniMod:4)GDDRK	3	YLAEVAC(UniMod:4)GDDRK3	3.12803e+06	3.29362e+06	3.39822e+06
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	YLAEVASGEK	YLAEVASGEK	2	YLAEVASGEK2	4.71935e+06	4.89605e+06	5.24976e+06
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	YLAEVASGEKK	YLAEVASGEKK	2	YLAEVASGEKK2	398906	353396	395339
P68511	P68511	1433F_RAT	Ywhah	14-3-3 protein eta	1	YLAEVASGEKK	YLAEVASGEKK	3	YLAEVASGEKK3	1.41672e+06	1.59255e+06	2.02678e+06
G3V9A3	Q5EBB0;G3V9A3	G3V9A3_RAT	Sfn	Stratifin	0	YLAEVATGDDK	YLAEVATGDDK	2	YLAEVATGDDK2	8506.22	6083.69	11725.4
P61983	P61983	1433G_RAT	Ywhag	14-3-3 protein gamma	1	YLAEVATGEK	YLAEVATGEK	2	YLAEVATGEK2	3.1458e+06	3.43331e+06	3.49483e+06
P61983	P61983	1433G_RAT	Ywhag	14-3-3 protein gamma	1	YLAEVATGEKR	YLAEVATGEKR	2	YLAEVATGEKR2	27682.5	24003.5	24259.6
P61983	P61983	1433G_RAT	Ywhag	14-3-3 protein gamma	1	YLAEVATGEKR	YLAEVATGEKR	3	YLAEVATGEKR3	210953	268809	265590
D3ZES2	D3ZES2	D3ZES2_RAT	Trappc6b	Trafficking protein particle complex subunit 6B	1	YLAFTCGLIR	YLAFTC(UniMod:4)GLIR	2	YLAFTC(UniMod:4)GLIR2	28454.7	22061.7	25252.5
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	YLAIAPPIIK	YLAIAPPIIK	2	YLAIAPPIIK2	110335	98078.5	110340
D3ZIK8	D3ZIK8	D3ZIK8_RAT	Fbxo38	F-box protein 38	1	YLAIYNCPHLHNPYNWISDHSR	YLAIYNC(UniMod:4)PHLHNPYNWISDHSR	3	YLAIYNC(UniMod:4)PHLHNPYNWISDHSR3			1373.59
P18484	P18484;A0A8I6A4J2	AP2A2_RAT	Ap2a2	AP-2 complex subunit alpha-2	0	YLALESMCTLASSEFSHEAVK	YLALESMC(UniMod:4)TLASSEFSHEAVK	3	YLALESMC(UniMod:4)TLASSEFSHEAVK3	38883	43735.1	38126.9
Q66HR0	Q66HR0	S12A9_RAT	Slc12a9	Solute carrier family 12 member 9	1	YLALLETLSR	YLALLETLSR	2	YLALLETLSR2	14818.2	6750.61	4429.82
D4A7C0	D4A7C0	GPN2_RAT	Gpn2	GPN-loop GTPase 2	1	YLASSDQTAEQEAMQL	YLASSDQTAEQEAMQL	2	YLASSDQTAEQEAMQL2		3044.58	
P02688	P02688	MBP_RAT	Mbp	Myelin basic protein	1	YLATASTMDHAR	YLATASTMDHAR	2	YLATASTMDHAR2	1862.51		5236.82
P02688	P02688	MBP_RAT	Mbp	Myelin basic protein	1	YLATASTMDHAR	YLATASTMDHAR	3	YLATASTMDHAR3	5968.06	5138.22	6338.22
M0RCS2	M0RCS2	M0RCS2_RAT	Tbl2	Transducin (beta)-like 2	1	YLATCADDR	YLATC(UniMod:4)ADDR	2	YLATC(UniMod:4)ADDR2	25578.5	20213.7	7541.47
Q920E1	Q920E1	PAR3_RAT	F2rl2	Proteinase-activated receptor 3	1	YLATVHPFTYR	YLATVHPFTYR	2	YLATVHPFTYR2	15709.8	14673.2	21299.1
Q920E1	Q920E1	PAR3_RAT	F2rl2	Proteinase-activated receptor 3	1	YLATVHPFTYR	YLATVHPFTYR	3	YLATVHPFTYR3	366086	331500	336436
P32198	P32198	CPT1A_RAT	Cpt1a	Carnitine O-palmitoyltransferase 1, liver isoform	1	YLAVDSPFLK	YLAVDSPFLK	2	YLAVDSPFLK2	43044.3	40083.8	43079.3
A0A0G2K3L5	A0A0G2K3L5	A0A0G2K3L5_RAT	AABR07061001.1	Ig-like domain-containing protein	1	YLAWYQQKPGK	YLAWYQQKPGK	2	YLAWYQQKPGK2		21501.8	24388.5
A0A0G2K3L5	A0A0G2K3L5	A0A0G2K3L5_RAT	AABR07061001.1	Ig-like domain-containing protein	1	YLAWYQQKPGK	YLAWYQQKPGK	3	YLAWYQQKPGK3	264984	186709	230700
D3ZDZ1	A0A8I6A272;D3ZDZ1	D3ZDZ1_RAT	Apbb1ip	Amyloid beta precursor protein binding family B member 1 interacting protein	0	YLCCDDAR	YLC(UniMod:4)C(UniMod:4)DDAR	2	YLC(UniMod:4)C(UniMod:4)DDAR2	9644.66	10381.1	7350.62
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	YLCCDWHWTTDR	YLC(UniMod:4)C(UniMod:4)DWHWTTDR	3	YLC(UniMod:4)C(UniMod:4)DWHWTTDR3	6510.74	7269.2	7196.96
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	YLCQNGR	YLC(UniMod:4)QNGR	2	YLC(UniMod:4)QNGR2		28444.2	
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	YLCSVCNAK	YLC(UniMod:4)SVC(UniMod:4)NAK	2	YLC(UniMod:4)SVC(UniMod:4)NAK2	394399	428319	475092
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	YLCTLTQR	YLC(UniMod:4)TLTQR	2	YLC(UniMod:4)TLTQR2	9574.95	6482.22	12424.8
P0C6B8	P0C6B8	SVEP1_RAT	Svep1	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	1	YLCVDGFFLR	YLC(UniMod:4)VDGFFLR	2	YLC(UniMod:4)VDGFFLR2	18958	6949.53	29380.8
Q6AYD0	Q6AYD0	Q6AYD0_RAT	Lrrc17	Leucine rich repeat containing 17	1	YLDCQER	YLDC(UniMod:4)QER	2	YLDC(UniMod:4)QER2	9064.64	11168.2	
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	YLDDRYEMEDGR	YLDDRYEMEDGR	3	YLDDRYEMEDGR3	104447	109384	98496.1
P18298	P13444;P18298;A0A8I6G8F2	METK2_RAT	Mat2a	S-adenosylmethionine synthase isoform type-2	0	YLDEDTIYHLQPSGR	YLDEDTIYHLQPSGR	3	YLDEDTIYHLQPSGR3	71251.7	101607	88348.3
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	YLDELMK	YLDELMK	2	YLDELMK2	50242.5	59995.9	53377.2
P17046	P17046	LAMP2_RAT	Lamp2	Lysosome-associated membrane glycoprotein 2	1	YLDFIFAVK	YLDFIFAVK	2	YLDFIFAVK2	22445.8	24027.9	18549.6
P62074	P62074	TIM10_RAT	Timm10	Mitochondrial import inner membrane translocase subunit Tim10	1	YLDIHER	YLDIHER	2	YLDIHER2	14042.7	18369	14256.6
Q5QJC9	Q5QJC9	BAG5_RAT	Bag5	BAG family molecular chaperone regulator 5	1	YLDLEEEADNTHAFDLGQNHSIIK	YLDLEEEADNTHAFDLGQNHSIIK	3	YLDLEEEADNTHAFDLGQNHSIIK3	3134.75	4867.15	
Q5QJC9	Q5QJC9	BAG5_RAT	Bag5	BAG family molecular chaperone regulator 5	1	YLDLEEEADNTHAFDLGQNHSIIK	YLDLEEEADNTHAFDLGQNHSIIK	4	YLDLEEEADNTHAFDLGQNHSIIK4	4870.99	10755.1	9119.95
Q5XIM7	Q5XIM7	SYK_RAT	Kars1	Lysine--tRNA ligase	1	YLDLILNDFVR	YLDLILNDFVR	2	YLDLILNDFVR2	22202.2	15657.6	12829.2
A0A0G2K012	A0A0G2K012	A0A0G2K012_RAT	Ubxn6	UBX domain protein 6	1	YLDNIHLHPEEEK	YLDNIHLHPEEEK	4	YLDNIHLHPEEEK4	4989.68	6050.54	4571.93
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	YLDNVVNK	YLDNVVNK	2	YLDNVVNK2	100718	131150	114121
A0A8I6AIV4	A0A8I5YB95;A0A8I6AIV4	A0A8I6AIV4_RAT	Dctn3l1	Dynactin 3-like 1	0	YLDPEYIDR	YLDPEYIDR	2	YLDPEYIDR2	111247	109612	117860
A0A8I6A822	A0A8I6A822	A0A8I6A822_RAT	Tm9sf3	Transmembrane 9 superfamily member	1	YLDPSFFQHR	YLDPSFFQHR	2	YLDPSFFQHR2	23205.1	20405.5	24141.8
A0A8I6A822	A0A8I6A822	A0A8I6A822_RAT	Tm9sf3	Transmembrane 9 superfamily member	1	YLDPSFFQHR	YLDPSFFQHR	3	YLDPSFFQHR3	108196	101031	90043
G3V9T7	G3V9T7	GET3_RAT	Get3	ATPase Get3	1	YLDQMEDLYEDFHIVK	YLDQMEDLYEDFHIVK	3	YLDQMEDLYEDFHIVK3	48218.1	43028.9	24365.9
Q02769	Q02769	FDFT_RAT	Fdft1	Squalene synthase	1	YLDQTSR	YLDQTSR	2	YLDQTSR2	15489.6	12692.9	11959.4
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	YLDRTEQWSK	YLDRTEQWSK	2	YLDRTEQWSK2	11426.1	5947.01	5996.87
Q6MG90	Q6MG90	Q6MG90_RAT	C4b	Complement C4B (Chido blood group)	1	YLDRTEQWSK	YLDRTEQWSK	3	YLDRTEQWSK3	385750	492625	634792
A0A8I6AMY8	A0A8I6AMY8	A0A8I6AMY8_RAT	Eif4g3	Eukaryotic translation initiation factor 4 gamma, 3	1	YLDSDTEKELQALYALQASIVK	YLDSDTEKELQALYALQASIVK	3	YLDSDTEKELQALYALQASIVK3	5116.06		7163.32
F6Q5K7	F6Q5K7	F6Q5K7_RAT	Mrps18b	28S ribosomal protein S18b, mitochondrial	1	YLDSEEYQNR	YLDSEEYQNR	2	YLDSEEYQNR2	1557.15		7753.68
Q9EQE1	Q9EQE1	SENP2_RAT	Senp2	Sentrin-specific protease 2	1	YLDSMGQK	YLDSMGQK	2	YLDSMGQK2	29930.4	20397.7	32855.7
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	YLDSTFTSR	YLDSTFTSR	2	YLDSTFTSR2	1.0762e+07	60230.4	54239.8
A0A0G2K3W2	A0A0G2K3W2	A0A0G2K3W2_RAT	F5	Coagulation factor V	1	YLDSTFTSRDPQGEYEEHLGILGPVIR	YLDSTFTSRDPQGEYEEHLGILGPVIR	4	YLDSTFTSRDPQGEYEEHLGILGPVIR4	217078	316437	285141
A0A8I5Y7P7	A0A8I5Y7P7	A0A8I5Y7P7_RAT	Igkvl-ps6	Immunoglobulin V-set domain-containing protein	1	YLDWYQQK	YLDWYQQK	2	YLDWYQQK2	212345	166130	180738
D3ZFJ6	D3ZFJ6	D3ZFJ6_RAT	Lactb	Lactamase, beta	1	YLDYMQK	YLDYMQK	2	YLDYMQK2	22432.4	14708.4	27994.7
D3ZBN4	D3ZBN4	D3ZBN4_RAT	Erg28	Ergosterol biosynthesis 28 homolog	1	YLEAEPVSR	YLEAEPVSR	2	YLEAEPVSR2	11505.5	11916.4	8942.79
Q6IMX7	Q6IMX7	HPBP1_RAT	Hspbp1	Hsp70-binding protein 1	1	YLEAGAAGLR	YLEAGAAGLR	2	YLEAGAAGLR2	5268.79	4672.28	7089.66
A0JPJ7	A0JPJ7	OLA1_RAT	Ola1	Obg-like ATPase 1	1	YLEANMTQSALPK	YLEANMTQSALPK	2	YLEANMTQSALPK2	9816.1	9050.53	12609.2
Q07803	Q07803	EFGM_RAT	Gfm1	Elongation factor G, mitochondrial	1	YLEATGQLPVK	YLEATGQLPVK	2	YLEATGQLPVK2	6126.7	5986.29	3527.77
Q32PX6	Q32PX6	Q32PX6_RAT	Rhog	Ras homolog family member G	1	YLECSALQQDGVK	YLEC(UniMod:4)SALQQDGVK	2	YLEC(UniMod:4)SALQQDGVK2	82671.3	62988.5	78184.7
Q32PX6	Q32PX6	Q32PX6_RAT	Rhog	Ras homolog family member G	1	YLECSALQQDGVKEVFAEAVR	YLEC(UniMod:4)SALQQDGVKEVFAEAVR	3	YLEC(UniMod:4)SALQQDGVKEVFAEAVR3	8658.59	8220.15	10086.8
Q6RUV5	A0A8I6A1P8;M0R5T4;Q6RUV5	RAC1_RAT	Rac1	Ras-related C3 botulinum toxin substrate 1	0	YLECSALTQR	YLEC(UniMod:4)SALTQR	2	YLEC(UniMod:4)SALTQR2	1.62839e+06	1.60388e+06	1.77306e+06
Q6RUV5	A0A8I6A1P8;M0R5T4;Q6RUV5	RAC1_RAT	Rac1	Ras-related C3 botulinum toxin substrate 1	0	YLECSALTQR	YLEC(UniMod:4)SALTQR	3	YLEC(UniMod:4)SALTQR3	14135.7	11981.9	17099.2
A0A8I6B436	A0A8I6B436	A0A8I6B436_RAT	Lyst	Lysosomal trafficking regulator	1	YLEEEYRK	YLEEEYRK	2	YLEEEYRK2	3570.56	3597.51	5843.57
D4A0G0	D4A0G0	D4A0G0_RAT	Osbpl7	Oxysterol-binding protein	1	YLEEGNIQAAEAQK	YLEEGNIQAAEAQK	2	YLEEGNIQAAEAQK2	1046.84	1989.17	
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	YLEESNFVHR	YLEESNFVHR	2	YLEESNFVHR2	13353.4	7438.84	11398.3
Q64725	Q64725	KSYK_RAT	Syk	Tyrosine-protein kinase SYK	1	YLEESNFVHR	YLEESNFVHR	3	YLEESNFVHR3	40452.9	33224.8	34262.7
B2RYN0	B2RYN0	B2RYN0_RAT	Pgm3	Phosphoacetylglucosamine mutase	1	YLEEVMK	YLEEVMK	2	YLEEVMK2		11330.9	16304.7
P47860	P47860	PFKAP_RAT	Pfkp	ATP-dependent 6-phosphofructokinase, platelet type	1	YLEHLSGDGK	YLEHLSGDGK	2	YLEHLSGDGK2	28013.6	16390.6	27268.2
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	YLEKPMEIAR	YLEKPMEIAR	2	YLEKPMEIAR2	11075.7	11441.9	8154.22
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	YLEKPMEIAR	YLEKPMEIAR	3	YLEKPMEIAR3	83916.9	94086.6	106489
P08461	A0A8I6B5J2;P08461	ODP2_RAT	Dlat	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	0	YLEKPVTMLL	YLEKPVTMLL	2	YLEKPVTMLL2	41555.4	40544.2	39340.8
Q1JU68	Q1JU68	EIF3A_RAT	Eif3a	Eukaryotic translation initiation factor 3 subunit A	1	YLELCVDLR	YLELC(UniMod:4)VDLR	2	YLELC(UniMod:4)VDLR2	10110.1	6403.25	5448.4
Q9Z2Q1	Q9Z2Q1	SC31A_RAT	Sec31a	Protein transport protein Sec31A	1	YLELLGYR	YLELLGYR	2	YLELLGYR2	123310	118482	130524
D4AE96	D4AE96	D4AE96_RAT	Ipo7	Importin 7	1	YLEMIYSMCK	YLEMIYSMC(UniMod:4)K	2	YLEMIYSMC(UniMod:4)K2	5859.67	9755.72	12015.9
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	YLEMLKDPNIIK	YLEMLKDPNIIK	2	YLEMLKDPNIIK2	9081.05	3956.46	7499.86
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	YLEMLKDPNIIK	YLEMLKDPNIIK	3	YLEMLKDPNIIK3	47708.3	38492.3	61755.7
Q9WV63	Q9WV63;A0A8I6A456	KIF2A_RAT	Kif2a	Kinesin-like protein KIF2A	0	YLENQTFR	YLENQTFR	2	YLENQTFR2	718588	849084	779004
P52631	P52631	STAT3_RAT	Stat3	Signal transducer and activator of transcription 3	1	YLEQLHQLYSDSFPMELR	YLEQLHQLYSDSFPMELR	3	YLEQLHQLYSDSFPMELR3	49751.3	64459.5	57724.1
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	YLESLGEEQR	YLESLGEEQR	2	YLESLGEEQR2	59578.5	52082.3	55357
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	YLESLGEEQRK	YLESLGEEQRK	2	YLESLGEEQRK2	9406.12	7384.85	
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	YLESLGEEQRK	YLESLGEEQRK	3	YLESLGEEQRK3	74268	107677	81422.5
P32198	P32198	CPT1A_RAT	Cpt1a	Carnitine O-palmitoyltransferase 1, liver isoform	1	YLESVRPLMK	YLESVRPLMK	3	YLESVRPLMK3	65601.2	60904.8	55758.1
A0A8I6A4J2	A0A8I6A4J2	A0A8I6A4J2_RAT	Ap2a1	AP-2 complex subunit alpha	1	YLETADYAIR	YLETADYAIR	2	YLETADYAIR2	7021.39	4372.42	3956.24
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	YLETLLHSQQQLAK	YLETLLHSQQQLAK	2	YLETLLHSQQQLAK2	6470.81	8413.41	10746.1
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	YLETLLHSQQQLAK	YLETLLHSQQQLAK	3	YLETLLHSQQQLAK3	242761	269882	249064
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	YLETPGDENEHAHFQK	YLETPGDENEHAHFQK	2	YLETPGDENEHAHFQK2	2041.9	3101.76	825.696
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	YLETPGDENEHAHFQK	YLETPGDENEHAHFQK	3	YLETPGDENEHAHFQK3	41895.6	33216	41237.7
P08592	P08592	A4_RAT	App	Amyloid-beta precursor protein	1	YLETPGDENEHAHFQK	YLETPGDENEHAHFQK	4	YLETPGDENEHAHFQK4	86981.5	76265.9	122576
B2GUV9	B2GUV9	B2GUV9_RAT	Exoc3l4	Exocyst complex component 3-like 4	1	YLETQLVADK	YLETQLVADK	2	YLETQLVADK2	153838	167582	155730
Q6AXM8	Q6AXM8	PON2_RAT	Pon2	Serum paraoxonase/arylesterase 2	1	YLETYLNLR	YLETYLNLR	2	YLETYLNLR2	44249.7	45139.8	34990.8
Q6AYP5	Q6AYP5	CADM1_RAT	Cadm1	Cell adhesion molecule 1	1	YLEVQYKPQVQIQMTYPLQGLTR	YLEVQYKPQVQIQMTYPLQGLTR	3	YLEVQYKPQVQIQMTYPLQGLTR3	32486	29937.7	34847.6
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	YLEVSEPQDIECCGALEYYDK	YLEVSEPQDIEC(UniMod:4)C(UniMod:4)GALEYYDK	3	YLEVSEPQDIEC(UniMod:4)C(UniMod:4)GALEYYDK3	19159.3	13931.1	20495.2
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	YLEVVLNTLQQASQAQVDK	YLEVVLNTLQQASQAQVDK	3	YLEVVLNTLQQASQAQVDK3	9431.73	4712.43	6329.5
F1LTR1	F1LTR1	WDR26_RAT	Wdr26	WD repeat-containing protein 26	1	YLEYLEDGK	YLEYLEDGK	2	YLEYLEDGK2	2094	9147.46	3009.32
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	YLFALLVGTK	YLFALLVGTK	2	YLFALLVGTK2	3742.52	4399.95	1895.99
F1LXS3	F1LXS3	F1LXS3_RAT	Matn2	Matrilin 2	1	YLFEDNLSR	YLFEDNLSR	2	YLFEDNLSR2	9864.58	15557.6	13522.9
Q5BQE6	Q5BQE6	DHC24_RAT	Dhcr24	Delta(24)-sterol reductase	1	YLFGWMVPPK	YLFGWMVPPK	2	YLFGWMVPPK2	14788.1	18629.9	14105.2
P63329	P20651;P63329;A0A8I5ZNS7;E2CWF0	PP2BA_RAT	Ppp3ca	Protein phosphatase 3 catalytic subunit alpha	0	YLFLGDYVDR	YLFLGDYVDR	2	YLFLGDYVDR2	44349.6	27980	34774.6
Q924S1	Q924S1	PLCD_RAT	Agpat4	1-acyl-sn-glycerol-3-phosphate acyltransferase delta	1	YLFLIHCEGTR	YLFLIHC(UniMod:4)EGTR	3	YLFLIHC(UniMod:4)EGTR3	15220.1	6938.38	10985.7
Q5XIM4	Q5XIM4	ATP5S_RAT	Dmac2l	ATP synthase subunit s, mitochondrial	1	YLFLSDLPGIK	YLFLSDLPGIK	2	YLFLSDLPGIK2	2447.14	3978.88	2057.03
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	YLFRPEEIELLICGSR	YLFRPEEIELLIC(UniMod:4)GSR	3	YLFRPEEIELLIC(UniMod:4)GSR3	15014.9	14185.2	17396.7
A0A8I5ZY29	A0A8I5ZY29	A0A8I5ZY29_RAT	Usp14	Ubiquitin carboxyl-terminal hydrolase	1	YLFTGLK	YLFTGLK	2	YLFTGLK2	32218.2	30783.1	33710.1
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	YLFYCNR	YLFYC(UniMod:4)NR	2	YLFYC(UniMod:4)NR2	27329.5	28865.3	39398.2
D3ZJB8	D3ZJB8	D3ZJB8_RAT	Arih2	RBR-type E3 ubiquitin transferase	1	YLFYFER	YLFYFER	2	YLFYFER2	32877.2	43217.1	38620.8
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	YLGCLGAFR	YLGC(UniMod:4)LGAFR	2	YLGC(UniMod:4)LGAFR2	4.28863e+06	6.03922e+06	5.35264e+06
P53813	P53813	PROS_RAT	Pros1	Vitamin K-dependent protein S	1	YLGCLGAFRVGAFSAAR	YLGC(UniMod:4)LGAFRVGAFSAAR	3	YLGC(UniMod:4)LGAFRVGAFSAAR3	25116.4	25909.9	34614.8
A0A8I6ABF2	A0A8I6ABF2	A0A8I6ABF2_RAT	Lmf1	Lipase maturation factor	1	YLGCVVR	YLGC(UniMod:4)VVR	2	YLGC(UniMod:4)VVR2	18441.8	15898.2	11023
Q63570	Q63570	PRS6B_RAT	Psmc4	26S proteasome regulatory subunit 6B	1	YLGEGPR	YLGEGPR	2	YLGEGPR2	228842	242568	272779
D3Z898	D3Z898	D3Z898_RAT	Samhd1	Deoxynucleoside triphosphate triphosphohydrolase SAMHD1	1	YLGETQPK	YLGETQPK	2	YLGETQPK2		5661.15	
Q5U2U0	Q5U2U0	CLPX_RAT	Clpx	ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial	1	YLGFGTPSNLGK	YLGFGTPSNLGK	2	YLGFGTPSNLGK2	4832.75		
Q2LC84	Q2LC84	NUMB_RAT	Numb	Protein numb homolog	1	YLGHVEVDESR	YLGHVEVDESR	3	YLGHVEVDESR3	20768.7	32566.3	48053.6
P46101	P46101	DPP6_RAT	Dpp6	Dipeptidyl aminopeptidase-like protein 6	1	YLGLHGLDNR	YLGLHGLDNR	3	YLGLHGLDNR3	8891.56	4407.03	11126.1
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	YLGLLAMSK	YLGLLAMSK	2	YLGLLAMSK2	139335	115097	113115
Q05096	Q05096;Q62774	MYO1B_RAT	Myo1b	Unconventional myosin-Ib	0	YLGLLENVR	YLGLLENVR	2	YLGLLENVR2	24111	26224.6	24389.2
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	YLGLMENLR	YLGLMENLR	2	YLGLMENLR2	200750	248628	245993
O88941	O88941	MOGS_RAT	Mogs	Mannosyl-oligosaccharide glucosidase	1	YLGLPGSLK	YLGLPGSLK	2	YLGLPGSLK2	62781	66208.5	63671.3
F1LX07	F1LX07	S2512_RAT	Slc25a12	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial	1	YLGLYNDPNSNPK	YLGLYNDPNSNPK	2	YLGLYNDPNSNPK2	67244.4	56430.4	72971.5
D3ZAR1	D3ZAR1	ARH_RAT	Ldlrap1	Low density lipoprotein receptor adapter protein 1	1	YLGMTLVERPK	YLGMTLVERPK	2	YLGMTLVERPK2	3937.84		10834.6
D3ZAR1	D3ZAR1	ARH_RAT	Ldlrap1	Low density lipoprotein receptor adapter protein 1	1	YLGMTLVERPK	YLGMTLVERPK	3	YLGMTLVERPK3	24335.7	19133.6	19476.9
F1LP44	F1LP44	F1LP44_RAT	Itgal	Integrin subunit alpha L	1	YLGMTMVTDAAK	YLGMTMVTDAAK	2	YLGMTMVTDAAK2	10028.3	6580.31	8652.23
P21913	P21913	SDHB_RAT	Sdhb	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial	1	YLGPAVLMQAYR	YLGPAVLMQAYR	2	YLGPAVLMQAYR2	39253.5	44965.8	44258.4
P97571	P97571	CAN1_RAT	Capn1	Calpain-1 catalytic subunit	1	YLGQDYENLR	YLGQDYENLR	2	YLGQDYENLR2	484209	487471	465789
A0A8I5ZT10	A0A8I5ZT10	A0A8I5ZT10_RAT	Ccm2	CCM2 scaffold protein	1	YLGQLTSIPGYLNPSSR	YLGQLTSIPGYLNPSSR	2	YLGQLTSIPGYLNPSSR2	19966.9	23838.8	22349.1
D3ZFL3	D3ZFL3	D3ZFL3_RAT	Map3k6	mitogen-activated protein kinase kinase kinase	1	YLGSASQGGYLK	YLGSASQGGYLK	2	YLGSASQGGYLK2	21997.8	17979.6	27641.4
D3ZCG1	D3ZCG1	D3ZCG1_RAT	Dipk2b	Divergent protein kinase domain 2B	1	YLGSCGR	YLGSC(UniMod:4)GR	2	YLGSC(UniMod:4)GR2		28360.7	25629
O70248	O70248	APBA3_RAT	Apba3	Amyloid-beta A4 precursor protein-binding family A member 3	1	YLGSTQLLSER	YLGSTQLLSER	2	YLGSTQLLSER2	6901.46	9596.98	7113.91
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	YLGSVDSR	YLGSVDSR	2	YLGSVDSR2	147754	144721	154741
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	YLGTHDR	YLGTHDR	2	YLGTHDR2	16708.4		24439.2
Q80ZG1	Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	1	YLGTLLR	YLGTLLR	2	YLGTLLR2	24901.1	25141.2	27236.7
P24329	P24329	THTR_RAT	Tst	Thiosulfate sulfurtransferase	1	YLGTQPEPDAVGLDSGHIR	YLGTQPEPDAVGLDSGHIR	3	YLGTQPEPDAVGLDSGHIR3	74343.8	41421.4	67489.8
Q91Y81	Q91Y81	SEPT2_RAT	Septin2	Septin-2	1	YLHDESGLNR	YLHDESGLNR	3	YLHDESGLNR3	8712.55	3413.96	4898.32
Q91Y81	Q91Y81	SEPT2_RAT	Septin2	Septin-2	1	YLHDESGLNRR	YLHDESGLNRR	3	YLHDESGLNRR3	54958.2	41119.8	46070.6
Q63450	Q63450	KCC1A_RAT	Camk1	Calcium/calmodulin-dependent protein kinase type 1	1	YLHDLGIVHR	YLHDLGIVHR	3	YLHDLGIVHR3		5271.69	6295.53
A0A8I6AEL0	A0A8I6AEL0	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	1	YLHDNQIVHR	YLHDNQIVHR	3	YLHDNQIVHR3	17886.3	5548.84	14651.8
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	YLHEAILQNEMAK	YLHEAILQNEMAK	3	YLHEAILQNEMAK3	4385.69		
A0A8I6AAN3	A0A8I6AAN3	A0A8I6AAN3_RAT	Aldh18a1	Delta-1-pyrroline-5-carboxylate synthase	1	YLHENLPVPQR	YLHENLPVPQR	3	YLHENLPVPQR3	82691.8	64788.2	68001.1
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	YLHGLSIVHR	YLHGLSIVHR	2	YLHGLSIVHR2	6772.64	5060	3451.89
Q5MPA9	Q5MPA9	DCLK2_RAT	Dclk2	Serine/threonine-protein kinase DCLK2	1	YLHGLSIVHR	YLHGLSIVHR	3	YLHGLSIVHR3	27953.2	35264.9	22907.9
Q6TUD3	Q6TUD3	Q6TUD3_RAT	Rdh11	LRRGT00111	1	YLHILINNAGVMMCPYSK	YLHILINNAGVMMC(UniMod:4)PYSK	3	YLHILINNAGVMMC(UniMod:4)PYSK3	7465.08	8117.92	5097.63
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	YLHPEGLPADYTMTFLFR	YLHPEGLPADYTMTFLFR	3	YLHPEGLPADYTMTFLFR3	13326.9	24105.1	9584.76
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	YLHPSSYTK	YLHPSSYTK	2	YLHPSSYTK2	10994.6	11476.7	9933.87
B5DEY9	B5DEY9	B5DEY9_RAT	Csgalnact1	Hexosyltransferase	1	YLHSNLIVIR	YLHSNLIVIR	3	YLHSNLIVIR3	29097.3	14214.3	15169.3
A0A8I6A678	A0A8I6A678	A0A8I6A678_RAT	Snx2	Sorting nexin-2	1	YLHVGYIVPPAPEK	YLHVGYIVPPAPEK	3	YLHVGYIVPPAPEK3		21571.4	19801.6
D3ZGG8	D3ZGG8	D3ZGG8_RAT	Hps3	Hermansky-Pudlak syndrome 3 protein homolog	1	YLHVQHLLYR	YLHVQHLLYR	3	YLHVQHLLYR3		4860.67	
F1MAL5	F1MAL5	F1MAL5_RAT	Irs2	Insulin receptor substrate 2	1	YLIALYTK	YLIALYTK	2	YLIALYTK2	6311.54		
P68255	P68255	1433T_RAT	Ywhaq	14-3-3 protein theta	1	YLIANATNPESK	YLIANATNPESK	2	YLIANATNPESK2	1.68628e+06	1.77092e+06	1.66962e+06
Q6P799	Q6P799	SYSC_RAT	Sars1	Serine--tRNA ligase, cytoplasmic	1	YLIATSEQPIAALHR	YLIATSEQPIAALHR	2	YLIATSEQPIAALHR2	1655.92		
Q6P799	Q6P799	SYSC_RAT	Sars1	Serine--tRNA ligase, cytoplasmic	1	YLIATSEQPIAALHR	YLIATSEQPIAALHR	3	YLIATSEQPIAALHR3	21500.4	13353	15567.9
Q568Z6	Q568Z6	IST1_RAT	Ist1	IST1 homolog	1	YLIEIAK	YLIEIAK	2	YLIEIAK2	67619.7	64029.8	49995.6
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	YLILKDPNK	YLILKDPNK	2	YLILKDPNK2	16912.7	21116.9	16717.4
P35213	P35213	1433B_RAT	Ywhab	14-3-3 protein beta/alpha	1	YLILNATHAESK	YLILNATHAESK	2	YLILNATHAESK2	228609	158449	198546
P35213	P35213	1433B_RAT	Ywhab	14-3-3 protein beta/alpha	1	YLILNATHAESK	YLILNATHAESK	3	YLILNATHAESK3	1.97149e+06	1.76851e+06	1.90693e+06
Q64165	Q64165	Q64165_RAT	Gcnt1	Glucosaminyl (N-acetyl) transferase 1	1	YLINLCGMDFPIK	YLINLC(UniMod:4)GMDFPIK	2	YLINLC(UniMod:4)GMDFPIK2	7548.08	5265.78	11201.5
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	YLIPNAGDATR	YLIPNAGDATR	2	YLIPNAGDATR2	120509	147373	127465
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	YLIRPQPWLEK	YLIRPQPWLEK	2	YLIRPQPWLEK2	2370.5	5136.68	
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	YLIRPQPWLEK	YLIRPQPWLEK	3	YLIRPQPWLEK3	233560	267174	225072
F1LXD8	F1LXD8	F1LXD8_RAT	Emilin2	Elastin microfibril interfacer 2	1	YLITATLTPER	YLITATLTPER	2	YLITATLTPER2	3811.41	2562.96	
A0A8I6AJ44	A0A8I6AJ44	A0A8I6AJ44_RAT	AABR07044388.2	Tenascin XB	1	YLITLYGFHDGQR	YLITLYGFHDGQR	3	YLITLYGFHDGQR3	3235.94		
A0A8I5ZKD4	A0A8I5ZKD4	A0A8I5ZKD4_RAT	Nhlrc3	NHL repeat containing 3	1	YLIVAQLNLSR	YLIVAQLNLSR	2	YLIVAQLNLSR2	9024.79	9305.43	13436.3
A0A8I6AGS4	A0A8I6AGS4	A0A8I6AGS4_RAT	Abi3bp	ABI family member 3 binding protein	1	YLIVVRPAPPPSQK	YLIVVRPAPPPSQK	3	YLIVVRPAPPPSQK3	25084.8	18194.7	30441
D3ZUL3	D3ZUL3	D3ZUL3_RAT	Col6a1	Collagen type VI alpha 1 chain	1	YLIVVTDGHPLEGYKEPCGGLEDAVNEAK	YLIVVTDGHPLEGYKEPC(UniMod:4)GGLEDAVNEAK	4	YLIVVTDGHPLEGYKEPC(UniMod:4)GGLEDAVNEAK4	5909.36	5101.5	5917.54
Q62825	Q62825	EXOC3_RAT	Exoc3	Exocyst complex component 3	1	YLKPETEESLCQSQPSMDGILDAIAK	YLKPETEESLC(UniMod:4)QSQPSMDGILDAIAK	3	YLKPETEESLC(UniMod:4)QSQPSMDGILDAIAK3	14686.4	16367.7	13482.2
D4A7H1	D4A7H1	SL9A9_RAT	Slc9a9	Sodium/hydrogen exchanger 9	1	YLKPILTHSGPPLTTTLPAWCGPVSR	YLKPILTHSGPPLTTTLPAWC(UniMod:4)GPVSR	3	YLKPILTHSGPPLTTTLPAWC(UniMod:4)GPVSR3	2761.77		5241.59
D4A7H1	D4A7H1	SL9A9_RAT	Slc9a9	Sodium/hydrogen exchanger 9	1	YLKPILTHSGPPLTTTLPAWCGPVSR	YLKPILTHSGPPLTTTLPAWC(UniMod:4)GPVSR	4	YLKPILTHSGPPLTTTLPAWC(UniMod:4)GPVSR4	21881.6	46903.9	32131.4
D3ZJD8	D3ZJD8	D3ZJD8_RAT	Clec1b	C-type lectin domain family 1 member B	1	YLLAEKENLSATLQQLAK	YLLAEKENLSATLQQLAK	3	YLLAEKENLSATLQQLAK3	117224	112108	153642
D3ZCG2	D3ZCG2	D3ZCG2_RAT	Kif21a	Kinesin family member 21A	1	YLLDHFLSMGINK	YLLDHFLSMGINK	3	YLLDHFLSMGINK3	14546.9	15223.4	15167.4
A0A0G2JUU7	A0A0G2JUU7	A0A0G2JUU7_RAT	Tubgcp3	Gamma-tubulin complex component	1	YLLDVLNR	YLLDVLNR	2	YLLDVLNR2	8531.42	6070.42	7328.49
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	YLLEGTAEAHELAEGSSADVLHSR	YLLEGTAEAHELAEGSSADVLHSR	4	YLLEGTAEAHELAEGSSADVLHSR4		3887.05	3503.1
Q8R491	Q8R491;Q8R3Z7	EHD3_RAT	Ehd3	EH domain-containing protein 3	0	YLLEQDFPGMR	YLLEQDFPGMR	2	YLLEQDFPGMR2	322721	326503	345849
Q8R491	Q8R491;Q8R3Z7	EHD3_RAT	Ehd3	EH domain-containing protein 3	0	YLLEQDFPGMR	YLLEQDFPGMR	3	YLLEQDFPGMR3	4018.15	2830.31	2837.09
Q80Z29	Q80Z29	NAMPT_RAT	Nampt	Nicotinamide phosphoribosyltransferase	1	YLLETSGNLDGLEYK	YLLETSGNLDGLEYK	2	YLLETSGNLDGLEYK2	2983.79	2462.34	4646.56
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	YLLGDMEGR	YLLGDMEGR	2	YLLGDMEGR2	92293.7	107105	81500
D3ZXK7	D3ZXK7	RN123_RAT	Rnf123	E3 ubiquitin-protein ligase RNF123	1	YLLGQPEPLAPGSALPAPDRK	YLLGQPEPLAPGSALPAPDRK	3	YLLGQPEPLAPGSALPAPDRK3	25723.3	22923.8	16751.3
P09034	P09034	ASSY_RAT	Ass1	Argininosuccinate synthase	1	YLLGTSLAR	YLLGTSLAR	2	YLLGTSLAR2	9385.09	11585.6	11851.1
Q07205	Q07205	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	1	YLLHGLECVVAMHQAQLISK	YLLHGLEC(UniMod:4)VVAMHQAQLISK	3	YLLHGLEC(UniMod:4)VVAMHQAQLISK3	2248.4	2980.01	
Q07205	Q07205	IF5_RAT	Eif5	Eukaryotic translation initiation factor 5	1	YLLHGLECVVAMHQAQLISK	YLLHGLEC(UniMod:4)VVAMHQAQLISK	4	YLLHGLEC(UniMod:4)VVAMHQAQLISK4	5325.33	9143.71	3408.52
Q71RP1	Q71RP1	HPSE_RAT	Hpse	Heparanase	1	YLLKPFGSDGLLSK	YLLKPFGSDGLLSK	2	YLLKPFGSDGLLSK2	59858.2	51302.6	70412.1
Q71RP1	Q71RP1	HPSE_RAT	Hpse	Heparanase	1	YLLKPFGSDGLLSK	YLLKPFGSDGLLSK	3	YLLKPFGSDGLLSK3	148155	172963	176024
B1H264	B1H264	B1H264_RAT	Tbc1d17	TBC1 domain family, member 17	1	YLLLASSPQDSR	YLLLASSPQDSR	2	YLLLASSPQDSR2	14216	23655.9	21190.9
A0A8I6APP3	A0A8I6APP3	A0A8I6APP3_RAT	Plekho2	Pleckstrin homology domain containing O2	1	YLLLCQAQLLVYENEDEQK	YLLLC(UniMod:4)QAQLLVYENEDEQK	3	YLLLC(UniMod:4)QAQLLVYENEDEQK3	5712.36	14545.8	11905.7
A0A8I6AWT9	A0A8I6AWT9	A0A8I6AWT9_RAT	Mtss1	MTSS I-BAR domain containing 1	1	YLLLEETEK	YLLLEETEK	2	YLLLEETEK2	179083	164989	180906
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	YLLLGHWR	YLLLGHWR	2	YLLLGHWR2	64243.8	49037.1	46223.7
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	YLLLMDLQDR	YLLLMDLQDR	2	YLLLMDLQDR2	12805.1	15701.4	12657.2
P13697	P13697	MAOX_RAT	Me1	NADP-dependent malic enzyme	1	YLLLMDLQDRNEK	YLLLMDLQDRNEK	3	YLLLMDLQDRNEK3	40181.5	30546.4	36611.9
A0A0G2K6D5	A0A0G2K6D5	A0A0G2K6D5_RAT	Pitrm1	Pitrilysin metalloproteinase 1	1	YLLNCDNMR	YLLNC(UniMod:4)DNMR	2	YLLNC(UniMod:4)DNMR2	13697.1	22255.1	17216.4
G3V7V3	G3V7V3	G3V7V3_RAT	Slc27a4	Solute carrier family 27 member 4	1	YLLNQPPR	YLLNQPPR	2	YLLNQPPR2	44865	47913.6	41671.7
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	YLLPEAVITYIR	YLLPEAVITYIR	2	YLLPEAVITYIR2	134654	174343	164433
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	YLLPEAVITYIR	YLLPEAVITYIR	3	YLLPEAVITYIR3	14030.4	14042.9	15037
M0R4W4	M0R4W4	M0R4W4_RAT	Ctdspl	protein-serine/threonine phosphatase	1	YLLPEVTVLDHGK	YLLPEVTVLDHGK	2	YLLPEVTVLDHGK2			6896.99
M0R4W4	M0R4W4	M0R4W4_RAT	Ctdspl	protein-serine/threonine phosphatase	1	YLLPEVTVLDHGK	YLLPEVTVLDHGK	3	YLLPEVTVLDHGK3	45765.4	29430.9	50937.5
M0R4W4	M0R4W4	M0R4W4_RAT	Ctdspl	protein-serine/threonine phosphatase	1	YLLPEVTVLDHGKK	YLLPEVTVLDHGKK	4	YLLPEVTVLDHGKK4	4094.17	8678.68	4569.28
Q8VI02	Q8VI02	PP4R1_RAT	Ppp4r1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	1	YLLPIVVR	YLLPIVVR	2	YLLPIVVR2	97071.9	95694.2	171416
Q642G4	Q642G4	PEX14_RAT	Pex14	Peroxisomal membrane protein PEX14	1	YLLPLILGGR	YLLPLILGGR	2	YLLPLILGGR2	3153.28	2733.35	2009.51
Q8R4A1	Q8R4A1	ERO1A_RAT	Ero1a	ERO1-like protein alpha	1	YLLQDNWLEK	YLLQDNWLEK	2	YLLQDNWLEK2	35580.6	34413.9	34029.8
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	YLLQEQLK	YLLQEQLK	2	YLLQEQLK2	75829.4	61617.3	94342.5
P0C2C4	P0C2C4	RM10_RAT	Mrpl10	Large ribosomal subunit protein uL10m	1	YLLQHQPVQLTSLLDQYVR	YLLQHQPVQLTSLLDQYVR	3	YLLQHQPVQLTSLLDQYVR3	4960.02		5483.44
Q6F596	Q6F596	GGPPS_RAT	Ggps1	Geranylgeranyl pyrophosphate synthase	1	YLLQLPGK	YLLQLPGK	2	YLLQLPGK2	42945.8	39794.6	41592.8
A0A8I6A7K7	A0A8I6A7K7	A0A8I6A7K7_RAT	Wdfy3	WD repeat and FYVE domain containing 3	1	YLLQPIAVEVFSGDGR	YLLQPIAVEVFSGDGR	2	YLLQPIAVEVFSGDGR2		3369.03	2544.38
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	YLLQPLGDFSR	YLLQPLGDFSR	2	YLLQPLGDFSR2	36808	39306.3	30941.8
P21670	P21670	PSA4_RAT	Psma4	Proteasome subunit alpha type-4	1	YLLQYQEPIPCEQLVTALCDIK	YLLQYQEPIPC(UniMod:4)EQLVTALC(UniMod:4)DIK	3	YLLQYQEPIPC(UniMod:4)EQLVTALC(UniMod:4)DIK3	666489	653692	597512
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	YLLSAVLTGHR	YLLSAVLTGHR	2	YLLSAVLTGHR2	60960.1	42434.9	64822.9
D3Z9E1	D3Z9E1	D3Z9E1_RAT	Emilin1	Elastin microfibril interfacer 1	1	YLLSAVLTGHR	YLLSAVLTGHR	3	YLLSAVLTGHR3	112390	69865.6	62974.2
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	YLLSLAVR	YLLSLAVR	2	YLLSLAVR2	7942.39	11168	5202.24
B5DF93	B5DF93	PATL1_RAT	Patl1	Protein PAT1 homolog 1	1	YLLSLEEERPALTDER	YLLSLEEERPALTDER	3	YLLSLEEERPALTDER3	31905.2	24363.4	26845.9
Q5RJR2	Q5RJR2;A0A8I6GGS8	TWF1_RAT	Twf1	Twinfilin-1	0	YLLSQSSPAPLTAAEEELR	YLLSQSSPAPLTAAEEELR	3	YLLSQSSPAPLTAAEEELR3	48581.2	27412.9	49486.1
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	YLLSSSSSPLGGQVLTESGQPCR	YLLSSSSSPLGGQVLTESGQPC(UniMod:4)R	3	YLLSSSSSPLGGQVLTESGQPC(UniMod:4)R3	90967	81789.5	71282.9
D3ZL50	D3ZL50	D3ZL50_RAT	Skic3	Tetratricopeptide repeat domain 37	1	YLLTSAIYALQGHSVAVQR	YLLTSAIYALQGHSVAVQR	3	YLLTSAIYALQGHSVAVQR3		2026.64	
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	YLLVLTR	YLLVLTR	2	YLLVLTR2	8133.23	15020	5475.23
F1LU27	F1LU27	F1LU27_RAT	Focad	Focadhesin	1	YLLVSMPLWAK	YLLVSMPLWAK	2	YLLVSMPLWAK2	6852.84	8804.47	3645.6
Q5U2Q4	Q5U2Q4	PAR16_RAT	Parp16	Protein mono-ADP-ribosyltransferase PARP16	1	YLLVYSQK	YLLVYSQK	2	YLLVYSQK2	19940.1	27823.9	16635.3
P09895	A0A8I6GKE4;P09895	RL5_RAT	Rpl5	Large ribosomal subunit protein uL18	0	YLMEEDEDAYK	YLMEEDEDAYK	2	YLMEEDEDAYK2	4873.8	6217.13	4596.5
P09895	A0A8I6GKE4;P09895	RL5_RAT	Rpl5	Large ribosomal subunit protein uL18	0	YLMEEDEDAYKK	YLMEEDEDAYKK	2	YLMEEDEDAYKK2	3306.13	3215.62	
P09895	A0A8I6GKE4;P09895	RL5_RAT	Rpl5	Large ribosomal subunit protein uL18	0	YLMEEDEDAYKK	YLMEEDEDAYKK	3	YLMEEDEDAYKK3	24875.3	18238.5	13318.9
D4AE59	D4AE59	STK11_RAT	Stk11	Serine/threonine-protein kinase STK11	1	YLMGDLLGEGSYGK	YLMGDLLGEGSYGK	2	YLMGDLLGEGSYGK2	51114.5	44508.5	45840.1
B4F766	B4F766	DYM_RAT	Dym	Dymeclin	1	YLMQGPCLPYTSK	YLMQGPC(UniMod:4)LPYTSK	2	YLMQGPC(UniMod:4)LPYTSK2	7755.77	8860.52	7084
Q9QW07	Q9QW07	PLCB4_RAT	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4	1	YLMSDENAPVFLDR	YLMSDENAPVFLDR	2	YLMSDENAPVFLDR2	5330.28		3800.65
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	YLMSGVVAPVK	YLMSGVVAPVK	2	YLMSGVVAPVK2	51807.3	42422.5	42965.5
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	YLMSGVVAPVKR	YLMSGVVAPVKR	3	YLMSGVVAPVKR3	4670.23	3791.15	8043.39
O08836	O08836	IGBP1_RAT	Igbp1	Immunoglobulin-binding protein 1	1	YLMVPALQGALTMK	YLMVPALQGALTMK	2	YLMVPALQGALTMK2	12538	12177.7	
Q4G012	Q4G012	FMC1_RAT	Fmc1	Protein FMC1 homolog	1	YLNAATGR	YLNAATGR	2	YLNAATGR2	8050.34	10335.6	12457.5
Q4G012	Q4G012	FMC1_RAT	Fmc1	Protein FMC1 homolog	1	YLNAATGRPYR	YLNAATGRPYR	3	YLNAATGRPYR3	16885.9	31450.3	10691.3
P18886	P18886	CPT2_RAT	Cpt2	Carnitine O-palmitoyltransferase 2, mitochondrial	1	YLNAQKPLLDDSQFR	YLNAQKPLLDDSQFR	3	YLNAQKPLLDDSQFR3	76760.2	83920.5	60975.9
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	YLNATLK	YLNATLK	2	YLNATLK2	38516.9	43558.2	35593.8
A0A8I6ABZ8	A0A8I6ABZ8	A0A8I6ABZ8_RAT	Akap10	A-kinase anchoring protein 10	1	YLNDLIHSVR	YLNDLIHSVR	3	YLNDLIHSVR3	19693.8	14370.4	20779.2
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	YLNEAAGAAAEEAK	YLNEAAGAAAEEAK	2	YLNEAAGAAAEEAK2	5390.81	2798.78	2437.81
P14046	A0A8I6AG69;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	YLNETQQLTEK	YLNETQQLTEK	2	YLNETQQLTEK2	43859.6	25242.1	24372.6
Q499T5	Q499T5	Q499T5_RAT	Capn7	Calpain 7	1	YLNFDPR	YLNFDPR	2	YLNFDPR2	12193.7		17552.3
F1LZW6	F1LZW6	S2513_RAT	Slc25a13	Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial	1	YLNIFGESQPNPK	YLNIFGESQPNPK	2	YLNIFGESQPNPK2	204889	227441	169256
M0R9W9	M0R9W9	M0R9W9_RAT	Lrch3	Leucine rich repeats and calponin homology domain containing 3	1	YLNIQACK	YLNIQAC(UniMod:4)K	2	YLNIQAC(UniMod:4)K2	46164.8	27875.9	47595.6
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	YLNIVLTSK	YLNIVLTSK	2	YLNIVLTSK2	22782.4	23150.4	19820.9
P0CC10	P0CC10	LRC4B_RAT	Lrrc4b	Leucine-rich repeat-containing protein 4B	1	YLNLGMCNLK	YLNLGMC(UniMod:4)NLK	2	YLNLGMC(UniMod:4)NLK2	6181.32		8223.45
P0CC10	P0CC10	LRC4B_RAT	Lrrc4b	Leucine-rich repeat-containing protein 4B	1	YLNLQENSIQVIR	YLNLQENSIQVIR	2	YLNLQENSIQVIR2	11256.4	10058.1	12880.2
Q07009	Q07009	CAN2_RAT	Capn2	Calpain-2 catalytic subunit	1	YLNQDYETLR	YLNQDYETLR	2	YLNQDYETLR2	1.81606e+06	1.9169e+06	1.95378e+06
Q9QY78	Q9QY78	IKKB_RAT	Ikbkb	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	YLNQFENCCGLR	YLNQFENC(UniMod:4)C(UniMod:4)GLR	2	YLNQFENC(UniMod:4)C(UniMod:4)GLR2	14933.2	18289.4	6326.47
Q769K2	Q769K2	NAPEP_RAT	Napepld	N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D	1	YLNTDDK	YLNTDDK	2	YLNTDDK2	72423	70572.5	72537.3
A0A8I6G8I6	A0A8I6G8I6	A0A8I6G8I6_RAT	Cul2	Cullin 2	1	YLNTQYIK	YLNTQYIK	2	YLNTQYIK2	33962.7	28296.4	19319.7
Q9JJH5	O35552;Q9JJH5	F262_RAT	Pfkfb2	6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2	0	YLNWIGVPTK	YLNWIGVPTK	2	YLNWIGVPTK2	8683.2	14895.7	11186.2
A0A8I5ZMM5	A0A8I6AA60;D3ZPL2;A0A8I6AHX0;A0A8I5ZN60;A0A8I5Y735;A0A8I5ZMM5;A0A8I6AHQ4	A0A8I5ZMM5_RAT	ENSRNOG00000070091	Ig-like domain-containing protein	0	YLNWYQQK	YLNWYQQK	2	YLNWYQQK2	398337	421971	382605
P22734	P22734	COMT_RAT	Comt	Catechol O-methyltransferase	1	YLPDTLLLEK	YLPDTLLLEK	2	YLPDTLLLEK2	199528	169948	195775
Q64620	Q64620	PPP6_RAT	Ppp6c	Serine/threonine-protein phosphatase 6 catalytic subunit	1	YLPENDLK	YLPENDLK	2	YLPENDLK2	137800	144129	128974
Q64620	Q64620	PPP6_RAT	Ppp6c	Serine/threonine-protein phosphatase 6 catalytic subunit	1	YLPENDLKR	YLPENDLKR	3	YLPENDLKR3	166224	189176	185179
P50609	P50609	FMOD_RAT	Fmod	Fibromodulin	1	YLPFVPSR	YLPFVPSR	2	YLPFVPSR2	192308	182548	190482
Q9WTS8	Q9WTS8	FCN1_RAT	Fcn1	Ficolin-1	1	YLPGSHESYADGINWLSGR	YLPGSHESYADGINWLSGR	3	YLPGSHESYADGINWLSGR3	172370	177121	169935
P24050	P24050	RS5_RAT	Rps5	Small ribosomal subunit protein uS7	1	YLPHSAGR	YLPHSAGR	2	YLPHSAGR2		26962.2	25666.2
A0A0G2K2G7	A0A0G2K2G7	A0A0G2K2G7_RAT	Anks1a	Ankyrin repeat and sterile alpha motif domain containing 1A	1	YLPLAASEGLALRPR	YLPLAASEGLALRPR	3	YLPLAASEGLALRPR3	19249	10545.5	24294.4
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	YLPPQTVDHIAQEQEGDLDPQTHDVDK	YLPPQTVDHIAQEQEGDLDPQTHDVDK	4	YLPPQTVDHIAQEQEGDLDPQTHDVDK4	35353.3	31603.3	29766.4
F1LVL5	F1LVL5	F1LVL5_RAT	Shroom4	Shroom family member 4	1	YLPQDQLQDYQHFVK	YLPQDQLQDYQHFVK	3	YLPQDQLQDYQHFVK3	27330.2	28749.1	23079
Q63644	Q63644	ROCK1_RAT	Rock1	Rho-associated protein kinase 1	1	YLPSANPSENR	YLPSANPSENR	2	YLPSANPSENR2	67060	58743	57944.2
Q4KM49	Q4KM49	SYYC_RAT	Yars1	Tyrosine--tRNA ligase, cytoplasmic	1	YLPTLGYSK	YLPTLGYSK	2	YLPTLGYSK2	39582.7	44602	48346
A0A8I5ZK89	A0A8I5ZK89	A0A8I5ZK89_RAT	Dock5	Dedicator of cytokinesis 5	1	YLQAHPEDQEK	YLQAHPEDQEK	3	YLQAHPEDQEK3			7501.47
A0A8I5ZTB8	A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	YLQAIMDSNAQSHK	YLQAIMDSNAQSHK	2	YLQAIMDSNAQSHK2	4529.03	2128.03	2561.59
A0A8I5ZTB8	A0A8I5ZTB8	A0A8I5ZTB8_RAT	Mtmr2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	YLQAIMDSNAQSHK	YLQAIMDSNAQSHK	3	YLQAIMDSNAQSHK3	16432.6	13991	12939.4
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	YLQAVGMFR	YLQAVGMFR	2	YLQAVGMFR2	19115.4	17134.2	22720.6
M0RAP5	M0RAP5	M0RAP5_RAT	Sbf1	SET binding factor 1	1	YLQAVVSSMPR	YLQAVVSSMPR	2	YLQAVVSSMPR2	14718.2	10383.4	11445.3
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	YLQDIYTSNK	YLQDIYTSNK	2	YLQDIYTSNK2	185137	153054	168256
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	YLQDIYTSNKQK	YLQDIYTSNKQK	2	YLQDIYTSNKQK2	1887.81	8719.63	2996.53
P02680	P02680	FIBG_RAT	Fgg	Fibrinogen gamma chain	1	YLQDIYTSNKQK	YLQDIYTSNKQK	3	YLQDIYTSNKQK3	19514.4	16032.6	23634.2
Q9QZR6	Q9QZR6	SEPT9_RAT	Septin9	Septin-9	1	YLQEEVNINR	YLQEEVNINR	2	YLQEEVNINR2	3699.3		9077.34
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	YLQEVINVLETDGHFR	YLQEVINVLETDGHFR	2	YLQEVINVLETDGHFR2	15107.2	21811.8	15122
Q63083	Q63083	NUCB1_RAT	Nucb1	Nucleobindin-1	1	YLQEVINVLETDGHFR	YLQEVINVLETDGHFR	3	YLQEVINVLETDGHFR3	100488	92224.8	78305.4
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	YLQGFKK	YLQGFKK	2	YLQGFKK2	83898.9	118805	123300
Q9QZN9	Q9QZN9	CNR2_RAT	Cnr2	Cannabinoid receptor 2	1	YLQGLGSEGK	YLQGLGSEGK	2	YLQGLGSEGK2	34664.4	43798.9	27664.8
Q9QZN9	Q9QZN9	CNR2_RAT	Cnr2	Cannabinoid receptor 2	1	YLQGLGSEGKEEAPK	YLQGLGSEGKEEAPK	2	YLQGLGSEGKEEAPK2	2799.25	6982.09	7743.29
Q9QZN9	Q9QZN9	CNR2_RAT	Cnr2	Cannabinoid receptor 2	1	YLQGLGSEGKEEAPK	YLQGLGSEGKEEAPK	3	YLQGLGSEGKEEAPK3	85382.3	115148	92460.1
D3ZAE6	D3ZAE6	D3ZAE6_RAT	Vasn	Vasorin	1	YLQGNTVQLR	YLQGNTVQLR	2	YLQGNTVQLR2	18336.4	12697	18352
M0R5F1	M0R5F1	M0R5F1_RAT	Aspn	Asporin	1	YLQIIFLHNNSITK	YLQIIFLHNNSITK	2	YLQIIFLHNNSITK2	4250.41	5977.79	2599.78
M0R5F1	M0R5F1	M0R5F1_RAT	Aspn	Asporin	1	YLQIIFLHNNSITK	YLQIIFLHNNSITK	3	YLQIIFLHNNSITK3	62673.6	34452.5	64700.8
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	YLQLQQEK	YLQLQQEK	2	YLQLQQEK2	72823.6	54859.1	71304.9
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	YLQLQQEKEQELSK	YLQLQQEKEQELSK	3	YLQLQQEKEQELSK3	22546	23367.4	23987.3
Q6P5P3	Q6P5P3	TTC9C_RAT	Ttc9c	Tetratricopeptide repeat protein 9C	1	YLQLTQSELSSYHR	YLQLTQSELSSYHR	3	YLQLTQSELSSYHR3	4651.22	3394.38	6319.81
Q00972	Q00972	BCKD_RAT	Bckdk	[3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial	1	YLQQELPVR	YLQQELPVR	2	YLQQELPVR2	9514.33	7823.74	9557.05
Q6XUX2	Q6XUX2	DUSTY_RAT	Dstyk	Dual serine/threonine and tyrosine protein kinase	1	YLQQIVDHLPCILILGQDCNAK	YLQQIVDHLPC(UniMod:4)ILILGQDC(UniMod:4)NAK	3	YLQQIVDHLPC(UniMod:4)ILILGQDC(UniMod:4)NAK3	3312	5138.75	
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	YLQQLAEKPLETR	YLQQLAEKPLETR	2	YLQQLAEKPLETR2	15651.9	18829.7	12370.3
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	YLQQLAEKPLETR	YLQQLAEKPLETR	3	YLQQLAEKPLETR3	123004	125150	110556
P51593	P51593	HUWE1_RAT	Huwe1	E3 ubiquitin-protein ligase HUWE1	1	YLQSNSNNWR	YLQSNSNNWR	2	YLQSNSNNWR2	32918.9	35664.5	37439.4
A0A8I5Y1D5	A0A8I5Y1D5	A0A8I5Y1D5_RAT	Mtmr1	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase	1	YLQTIMDANAQSHK	YLQTIMDANAQSHK	3	YLQTIMDANAQSHK3	4430.93	5783.49	7941.44
A0A8I5ZV26	A0A8I5ZV26	A0A8I5ZV26_RAT	Stom	Stomatin	1	YLQTLTTIAAEK	YLQTLTTIAAEK	2	YLQTLTTIAAEK2	1.5125e+06	1.46961e+06	1.76983e+06
A0A8I5ZV26	A0A8I5ZV26	A0A8I5ZV26_RAT	Stom	Stomatin	1	YLQTLTTIAAEK	YLQTLTTIAAEK	3	YLQTLTTIAAEK3	87930.7	99050.2	103414
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	YLQTYGEWNR	YLQTYGEWNR	2	YLQTYGEWNR2	28631.2	33642.1	26284.9
Q4V7C7	Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	1	YLRAEPEDHYFLLTEPPLNTPENR	YLRAEPEDHYFLLTEPPLNTPENR	4	YLRAEPEDHYFLLTEPPLNTPENR4	18005.5	26347.8	27182.2
A0A8J8YGQ6	A0A8J8YGQ6	A0A8J8YGQ6_RAT	Dhrsx	Dehydrogenase/reductase X-linked	1	YLRDEAEAEVLGAAR	YLRDEAEAEVLGAAR	3	YLRDEAEAEVLGAAR3	18029.8	24511.8	31026.8
D4A2D7	D4A2D7	D4A2D7_RAT	Ipo4	Importin 4	1	YLRPDDVSLAR	YLRPDDVSLAR	3	YLRPDDVSLAR3	36159.1	47335.6	46815.2
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	YLRPHLEATLQLSLK	YLRPHLEATLQLSLK	3	YLRPHLEATLQLSLK3	8566.57	7316.44	2409.22
D4A781	D4A781	D4A781_RAT	Ipo5	Importin 5	1	YLRPHLEATLQLSLK	YLRPHLEATLQLSLK	4	YLRPHLEATLQLSLK4	9447.23	6968.46	8413.71
Q4G074	Q4G074	KBP_RAT	Kifbp	KIF-binding protein	1	YLRPLDFEEAR	YLRPLDFEEAR	3	YLRPLDFEEAR3	2248.32	2945.86	
Q68FP9	Q68FP9	COG6_RAT	Cog6	Conserved oligomeric Golgi complex subunit 6	1	YLSAPDHLLMPQLNSLLSATVK	YLSAPDHLLMPQLNSLLSATVK	3	YLSAPDHLLMPQLNSLLSATVK3	3862.32	3851.83	9175.24
M0RD03	M0RD03	M0RD03_RAT	Eif4g1	Eukaryotic translation initiation factor 4 gamma, 1	1	YLSDEQK	YLSDEQK	2	YLSDEQK2	98268.6	102362	
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	YLSDLHAPGDPAWQCIGAQHK	YLSDLHAPGDPAWQC(UniMod:4)IGAQHK	3	YLSDLHAPGDPAWQC(UniMod:4)IGAQHK3	1541.49	5206.57	2839.48
O54921	O54921	EXOC2_RAT	Exoc2	Exocyst complex component 2	1	YLSDLHAPGDPAWQCIGAQHK	YLSDLHAPGDPAWQC(UniMod:4)IGAQHK	4	YLSDLHAPGDPAWQC(UniMod:4)IGAQHK4	18686.5	21624.9	21263.1
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	YLSDSYSPR	YLSDSYSPR	2	YLSDSYSPR2	22397.1	30280.9	17447.2
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	YLSESDGMPYK	YLSESDGMPYK	2	YLSESDGMPYK2	29015.9	26951.4	37331.3
D3ZX30	D3ZX30	D3ZX30_RAT	Dennd2c	DENN domain containing 2C	1	YLSESDGMPYKER	YLSESDGMPYKER	3	YLSESDGMPYKER3	26644.1	25200	18298.4
P35213	P35213	1433B_RAT	Ywhab	14-3-3 protein beta/alpha	1	YLSEVASGDNK	YLSEVASGDNK	2	YLSEVASGDNK2	3.11261e+06	2.56296e+06	3.08221e+06
Q64303	Q64303	PAK2_RAT	Pak2	Serine/threonine-protein kinase PAK 2	1	YLSFTPPEKDGFPSGTPALNTK	YLSFTPPEKDGFPSGTPALNTK	3	YLSFTPPEKDGFPSGTPALNTK3	19415.5	24074.2	18245.5
P20069	P20069	MPPA_RAT	Pmpca	Mitochondrial-processing peptidase subunit alpha	1	YLSGIAHFLEK	YLSGIAHFLEK	3	YLSGIAHFLEK3	43725.5	38975.2	36456
Q62904	Q62904	DHB7_RAT	Hsd17b7	3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7	1	YLSGTTGLGTNYVK	YLSGTTGLGTNYVK	2	YLSGTTGLGTNYVK2	3100.88	5779.56	
A0A8I6AAA9	A0A8I6AAA9	A0A8I6AAA9_RAT	Lrch1	Leucine rich repeats and calponin homology domain containing 1	1	YLSIQACQIK	YLSIQAC(UniMod:4)QIK	2	YLSIQAC(UniMod:4)QIK2	15070.7	27540.6	15398.1
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	YLSKPPK	YLSKPPK	2	YLSKPPK2	14157.1		10431
O08873	O08873	MADD_RAT	Madd	MAP kinase-activating death domain protein	1	YLSLGEHDRK	YLSLGEHDRK	3	YLSLGEHDRK3	32385.2	40849.9	36533.4
P02661	P02661	CASA1_RAT	Csn1s1	Alpha-S1-casein	1	YLSLNEEFVNNLNR	YLSLNEEFVNNLNR	2	YLSLNEEFVNNLNR2	7677.23	5326.92	7483
Q6MG61	Q6MG61	CLIC1_RAT	Clic1	Chloride intracellular channel protein 1	1	YLSNAYAR	YLSNAYAR	2	YLSNAYAR2	348909	298359	291183
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	YLSNLQNGMPLLK	YLSNLQNGMPLLK	2	YLSNLQNGMPLLK2	2122.66	7364.95	
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	YLSNVIESHTDFIYATIK	YLSNVIESHTDFIYATIK	3	YLSNVIESHTDFIYATIK3	43301.6	46108.6	34865
A2RUV9	A2RUV9	AEBP1_RAT	Aebp1	Adipocyte enhancer-binding protein 1	1	YLSPDATVSTEVR	YLSPDATVSTEVR	2	YLSPDATVSTEVR2	34986.9	28823.1	40202.6
Q5I0C3	Q5I0C3	MCCA_RAT	Mccc1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	1	YLSPVSAEGTQGGTIAPMTGTIEK	YLSPVSAEGTQGGTIAPMTGTIEK	3	YLSPVSAEGTQGGTIAPMTGTIEK3	13841.2	20722	17316.7
P04905	P04905	GSTM1_RAT	Gstm1	Glutathione S-transferase Mu 1	1	YLSTPIFSK	YLSTPIFSK	2	YLSTPIFSK2	18671.5	33763.4	25453.1
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	YLSVQALEAPR	YLSVQALEAPR	2	YLSVQALEAPR2	487073	541937	485806
Q91ZT1	Q91ZT1	VGFR3_RAT	Flt4	Vascular endothelial growth factor receptor 3	1	YLSVQALEAPR	YLSVQALEAPR	3	YLSVQALEAPR3	8443.97	5349.38	8489
A0A8I5ZPF8	A0A8I5ZPF8	A0A8I5ZPF8_RAT	Usp25	ubiquitinyl hydrolase 1	1	YLSYGSGPK	YLSYGSGPK	2	YLSYGSGPK2	13840.5	21093.2	14569.9
O08775	O08775	VGFR2_RAT	Kdr	Vascular endothelial growth factor receptor 2	1	YLSYPAPDIK	YLSYPAPDIK	2	YLSYPAPDIK2	59958	59866.3	66355.8
P15684	P15684	AMPN_RAT	Anpep	Aminopeptidase N	1	YLSYTLNPDYIR	YLSYTLNPDYIR	2	YLSYTLNPDYIR2	16134.1	15625.2	8150.99
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	YLTASQLVPPDNQDTR	YLTASQLVPPDNQDTR	2	YLTASQLVPPDNQDTR2	19569.6	20532.9	
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	YLTASQLVPPDNQDTR	YLTASQLVPPDNQDTR	3	YLTASQLVPPDNQDTR3	14126.9	2824.27	8558.15
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	YLTDKDPNLNEEDK	YLTDKDPNLNEEDK	3	YLTDKDPNLNEEDK3	37405.9	26661	52803.7
Q9WUD2	Q9WUD2	TRPV2_RAT	Trpv2	Transient receptor potential cation channel subfamily V member 2	1	YLTDSAYTEGSTGK	YLTDSAYTEGSTGK	2	YLTDSAYTEGSTGK2	27406	16541.4	20888.7
A0A8I6ACM8	A0A8I6ACM8	A0A8I6ACM8_RAT	Myo6	Unconventional myosin-VI	1	YLTESYGTGQDIDDR	YLTESYGTGQDIDDR	2	YLTESYGTGQDIDDR2	11158.4	7631.33	9265.49
A0A8I6G9X6	A0A8I6G9X6	A0A8I6G9X6_RAT	Kntc1	Kinetochore associated 1	1	YLTEVLPENR	YLTEVLPENR	2	YLTEVLPENR2	5881.42	8547.24	
B4F795	B4F795	CTL2_RAT	Slc44a2	Choline transporter-like protein 2	1	YLTFLSAR	YLTFLSAR	2	YLTFLSAR2	650613	674501	673953
Q4QQS6	Q4QQS6	Q4QQS6_RAT	Alg5	dolichyl-phosphate beta-glucosyltransferase	1	YLTGAWR	YLTGAWR	2	YLTGAWR2	15518.6	14755.5	
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	YLTLDSFDAMFR	YLTLDSFDAMFR	2	YLTLDSFDAMFR2	91694	100148	84698
P31430	P31430	DPEP1_RAT	Dpep1	Dipeptidase 1	1	YLTLTHNCNTPWADNWLVDK	YLTLTHNC(UniMod:4)NTPWADNWLVDK	3	YLTLTHNC(UniMod:4)NTPWADNWLVDK3			1647.72
Q5M872	Q5M872	DPEP2_RAT	Dpep2	Dipeptidase 2	1	YLTLTHTCNTPWAESSSK	YLTLTHTC(UniMod:4)NTPWAESSSK	3	YLTLTHTC(UniMod:4)NTPWAESSSK3	21581.5	26404.6	27795.4
E9PSW6	E9PSW6	E9PSW6_RAT	Lrch4	Leucine rich repeats and calponin homology domain containing 4	1	YLTMEAGR	YLTMEAGR	2	YLTMEAGR2	79660.1	76334.1	72676.6
Q9Z0W7	Q9Z0W7	CLIC4_RAT	Clic4	Chloride intracellular channel protein 4	1	YLTNAYSR	YLTNAYSR	2	YLTNAYSR2	189572	164639	181190
D3ZQ30	D3ZQ30	D3ZQ30_RAT	Telo2	Telomere length regulation protein TEL2 homolog	1	YLTSQFYGLNYSLR	YLTSQFYGLNYSLR	2	YLTSQFYGLNYSLR2	3282.44	5471.47	6735.77
Q641X8	Q641X8;A0A0G2K273	EIF3E_RAT	Eif3e	Eukaryotic translation initiation factor 3 subunit E	0	YLTTAVITNK	YLTTAVITNK	2	YLTTAVITNK2	151477	160641	168391
A0A140UHX9	A0A140UHX9	A0A140UHX9_RAT	Ccz1	CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated	1	YLTTSLFPR	YLTTSLFPR	2	YLTTSLFPR2	9269.94		15649.1
P85108	P85108;Q3KRE8	TBB2A_RAT	Tubb2a	Tubulin beta-2A chain	0	YLTVAAIFR	YLTVAAIFR	2	YLTVAAIFR2	7.36106e+06	7.83511e+06	7.42503e+06
Q6P9T8	P69897;Q6P9T8;B4F7C2	TBB4B_RAT	Tubb4b	Tubulin beta-4B chain	0	YLTVAAVFR	YLTVAAVFR	2	YLTVAAVFR2	7.45055e+06	7.39462e+06	6.86542e+06
M0R8B6	M0R8B6	M0R8B6_RAT	Tubb1	Tubulin beta chain	1	YLTVACIFR	YLTVAC(UniMod:4)IFR	2	YLTVAC(UniMod:4)IFR2	1.87786e+07	1.98089e+07	2.04642e+07
Q4QRB4	Q4QRB4;Q4QQV0	TBB3_RAT	Tubb3	Tubulin beta-3 chain	0	YLTVATVFR	YLTVATVFR	2	YLTVATVFR2	142586	144362	134667
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	YLTVQNTVR	YLTVQNTVR	2	YLTVQNTVR2	53966.2	44094.3	48067.8
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	YLVALGHAYHPEEFVCSQCGK	YLVALGHAYHPEEFVC(UniMod:4)SQC(UniMod:4)GK	3	YLVALGHAYHPEEFVC(UniMod:4)SQC(UniMod:4)GK3	17074.9	16721.5	11557.6
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	YLVALGHAYHPEEFVCSQCGK	YLVALGHAYHPEEFVC(UniMod:4)SQC(UniMod:4)GK	4	YLVALGHAYHPEEFVC(UniMod:4)SQC(UniMod:4)GK4	86365.3	112346	108516
A0A8I6GBD2	A0A8I6GBD2	A0A8I6GBD2_RAT	Actr10	Actin related protein 10	1	YLVEKPK	YLVEKPK	2	YLVEKPK2	48904.1	26528.8	44656.5
P83953	P83953	IMA5_RAT	Kpna1	Importin subunit alpha-5	1	YLVELGCIKPLCDLLTVMDAK	YLVELGC(UniMod:4)IKPLC(UniMod:4)DLLTVMDAK	3	YLVELGC(UniMod:4)IKPLC(UniMod:4)DLLTVMDAK3	16842.4	23435.7	25378.9
P61203	P61203	CSN2_RAT	Cops2	COP9 signalosome complex subunit 2	1	YLVLANMLMK	YLVLANMLMK	2	YLVLANMLMK2	93840.2	100961	84304.1
D4ADE8	Q64060;D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	YLVLDEADR	YLVLDEADR	2	YLVLDEADR2	73653.3	90754.7	75948.7
Q924S5	Q924S5	LONM_RAT	Lonp1	Lon protease homolog, mitochondrial	1	YLVPQAR	YLVPQAR	2	YLVPQAR2	114187	113566	136614
O35093	A0A8I6A2G5;O35093	TIM23_RAT	Timm23	Mitochondrial import inner membrane translocase subunit Tim23	0	YLVQDTDEFILPTGANK	YLVQDTDEFILPTGANK	2	YLVQDTDEFILPTGANK2	4653.18		4386.84
A0A0G2JZS1	A0A0G2JZS1	A0A0G2JZS1_RAT	Kpna6	Importin subunit alpha	1	YLVSLGCIKPLCDLLTVMDSK	YLVSLGC(UniMod:4)IKPLC(UniMod:4)DLLTVMDSK	3	YLVSLGC(UniMod:4)IKPLC(UniMod:4)DLLTVMDSK3	7625.77		3996.11
A0A8I6GIE0	A0A8I6GIE0	A0A8I6GIE0_RAT	Armh4	Armadillo-like helical domain containing 4	1	YLVTLPK	YLVTLPK	2	YLVTLPK2	56730.5	67958.1	45728.8
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	YLVVLNFQDVGLSAR	YLVVLNFQDVGLSAR	2	YLVVLNFQDVGLSAR2	32816.3	24213.8	20751.5
Q794F9	Q794F9	4F2_RAT	Slc3a2	4F2 cell-surface antigen heavy chain	1	YLVVLNFQDVGLSAR	YLVVLNFQDVGLSAR	3	YLVVLNFQDVGLSAR3	4355.07		
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	YLVVNADEGEPGTCK	YLVVNADEGEPGTC(UniMod:4)K	2	YLVVNADEGEPGTC(UniMod:4)K2	33290.9	24144.6	24210.5
Q5XIH3	Q5XIH3	Q5XIH3_RAT	Ndufv1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	1	YLVVNADEGEPGTCKDR	YLVVNADEGEPGTC(UniMod:4)KDR	3	YLVVNADEGEPGTC(UniMod:4)KDR3	25414.5	25341	32979.3
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	YLVVYNPFEQER	YLVVYNPFEQER	2	YLVVYNPFEQER2	22999.7	27697.1	35465.3
D3ZLT1	D3ZLT1	D3ZLT1_RAT	Ndufb7	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7	1	YLWDASVEPDPEK	YLWDASVEPDPEK	2	YLWDASVEPDPEK2	14457.1	16479.7	29295.9
Q8VHU4	Q8VHU4	ELP1_RAT	Elp1	Elongator complex protein 1	1	YLWESPSSAVEPWK	YLWESPSSAVEPWK	2	YLWESPSSAVEPWK2	13771.4	6116.33	11449
Q64537	Q64537	CPNS1_RAT	Capns1	Calpain small subunit 1	1	YLWNNIK	YLWNNIK	1	YLWNNIK1	15241.9	19646.4	17902
Q64537	Q64537	CPNS1_RAT	Capns1	Calpain small subunit 1	1	YLWNNIK	YLWNNIK	2	YLWNNIK2	2.6218e+06	2.79645e+06	2.5174e+06
A0A8I6AD67	A0A8I6AD67	A0A8I6AD67_RAT	Parp9	Poly [ADP-ribose] polymerase	1	YLWTCTQDR	YLWTC(UniMod:4)TQDR	2	YLWTC(UniMod:4)TQDR2	10472.2	11038.7	
D4A7R3	D4A7R3	D4A7R3_RAT	Nup205	Nucleoporin 205	1	YLYHGNSNPELAFESAK	YLYHGNSNPELAFESAK	3	YLYHGNSNPELAFESAK3	5266.34		3836.02
F1M9D6	F1M9D6	F1M9D6_RAT	Stat1	Signal transducer and activator of transcription	1	YLYPNIDKDHAFGK	YLYPNIDKDHAFGK	4	YLYPNIDKDHAFGK4	17377.7	20297.1	15959.9
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	YLYSGQTLDTLGGK	YLYSGQTLDTLGGK	2	YLYSGQTLDTLGGK2	94592.7	90111.4	106748
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	YLYSGQTLDTLGGK	YLYSGQTLDTLGGK	3	YLYSGQTLDTLGGK3	4531.77	6801.99	4038.25
D4A8G5	D4A8G5	D4A8G5_RAT	Tgfbi	Transforming growth factor, beta induced	1	YLYSGQTLDTLGGKK	YLYSGQTLDTLGGKK	3	YLYSGQTLDTLGGKK3	38826	51443.8	44160.5
Q4FZT9	Q4FZT9	PSMD2_RAT	Psmd2	26S proteasome non-ATPase regulatory subunit 2	1	YLYSSEDYIK	YLYSSEDYIK	2	YLYSSEDYIK2	109779	119702	128582
P63174	D4AD70;D4A862;P63174;D3ZZH2	RL38_RAT	Rpl38	Large ribosomal subunit protein eL38	0	YLYTLVITDKEK	YLYTLVITDKEK	3	YLYTLVITDKEK3			6005.24
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	YLYVLEFSDYPGTHEPLEPEVK	YLYVLEFSDYPGTHEPLEPEVK	3	YLYVLEFSDYPGTHEPLEPEVK3	553193	374875	309396
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	YLYVLEFSDYPGTHEPLEPEVK	YLYVLEFSDYPGTHEPLEPEVK	4	YLYVLEFSDYPGTHEPLEPEVK4	10573.2	13066.9	
A0A8I5ZNE7	A0A8I5ZNE7	A0A8I5ZNE7_RAT	Psmd3	Proteasome 26S subunit, non-ATPase 3	1	YLYYTGR	YLYYTGR	2	YLYYTGR2	129000	174747	147326
Q5XIF6	A0A8I6AF82;P68370;Q5XIF6;Q6AYZ1;Q6P9V9;F1LUM5	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	YMACCLLYR	YMAC(UniMod:4)C(UniMod:4)LLYR	2	YMAC(UniMod:4)C(UniMod:4)LLYR2	82063	80182.2	70309.5
Q5XIF6	A0A8I6AF82;P68370;Q5XIF6;Q6AYZ1;Q6P9V9;F1LUM5	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	YMACCLLYR	YMAC(UniMod:4)C(UniMod:4)LLYR	3	YMAC(UniMod:4)C(UniMod:4)LLYR3	4855.88	5265.82	4030.07
Q5XIF6	A0A8I6AF82;P68370;Q5XIF6;Q6AYZ1;Q6P9V9;F1LUM5	TBA4A_RAT	Tuba4a	Tubulin alpha-4A chain	0	YMACCLLYRGDVVPK	YMAC(UniMod:4)C(UniMod:4)LLYRGDVVPK	3	YMAC(UniMod:4)C(UniMod:4)LLYRGDVVPK3	46446.5	34462.7	41668.5
Q6AY56	Q68FR8;Q6AY56	TBA8_RAT	Tuba8	Tubulin alpha-8 chain	0	YMACCMLYR	YMAC(UniMod:4)C(UniMod:4)MLYR	2	YMAC(UniMod:4)C(UniMod:4)MLYR2	187860	200301	217607
Q75Q39	Q75Q39	TOM70_RAT	Tomm70	Mitochondrial import receptor subunit TOM70	1	YMAEALLLR	YMAEALLLR	2	YMAEALLLR2	91168.3	79406.5	99689.5
Q63632	Q63632	S12A4_RAT	Slc12a4	Solute carrier family 12 member 4	1	YMAEPWDPSHAPDNFR	YMAEPWDPSHAPDNFR	3	YMAEPWDPSHAPDNFR3	12973.7	14261.3	22269.2
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	YMALSLQSFCPTTR	YMALSLQSFC(UniMod:4)PTTR	2	YMALSLQSFC(UniMod:4)PTTR2	63407.9	95962.3	67252.4
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	YMALSLQSFCPTTR	YMALSLQSFC(UniMod:4)PTTR	3	YMALSLQSFC(UniMod:4)PTTR3	12666	15360.5	12772
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	YMASTAVGSR	YMASTAVGSR	2	YMASTAVGSR2	43996.2	57509.3	41033.3
A0A0G2K8K8	A0A0G2K8K8;P20766	A0A0G2K8K8_RAT	Iglc1	Lambda-chain C1-region-like	0	YMATSYLLLTAK	YMATSYLLLTAK	2	YMATSYLLLTAK2	23739.1	22860.6	15174.6
P02770	P02770	ALBU_RAT	Alb	Albumin	1	YMCENQATISSK	YMC(UniMod:4)ENQATISSK	2	YMC(UniMod:4)ENQATISSK2	1.10668e+07	723202	924321
P02770	P02770	ALBU_RAT	Alb	Albumin	1	YMCENQATISSK	YMC(UniMod:4)ENQATISSK	3	YMC(UniMod:4)ENQATISSK3	42701.5	46138	50653.6
P62076	P62076	TIM13_RAT	Timm13	Mitochondrial import inner membrane translocase subunit Tim13	1	YMDAWNTVSR	YMDAWNTVSR	2	YMDAWNTVSR2	29731	37224.9	47209.5
Q63357	Q63357;A0A0G2K6E3	MYO1D_RAT	Myo1d	Unconventional myosin-Id	0	YMDINFDFK	YMDINFDFK	2	YMDINFDFK2	22304.7	30339.8	28009.6
A0A0G2K350	A0A0G2K350	A0A0G2K350_RAT	Napg	NSF attachment protein gamma	1	YMDNDYAK	YMDNDYAK	2	YMDNDYAK2	59284.4	54191	50639.3
B2GUX5	B2GUX5	B2GUX5_RAT	Nt5c3a	5'-nucleotidase	1	YMDSYDIVLVK	YMDSYDIVLVK	2	YMDSYDIVLVK2	120797	112716	133171
Q63355	Q63355	MYO1C_RAT	Myo1c	Unconventional myosin-Ic	1	YMDVQFDFK	YMDVQFDFK	2	YMDVQFDFK2	144857	159631	121962
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	YMEAFKPFLGIGLK	YMEAFKPFLGIGLK	2	YMEAFKPFLGIGLK2	4738.42	5104.08	7456.86
P52296	P52296	IMB1_RAT	Kpnb1	Importin subunit beta-1	1	YMEAFKPFLGIGLK	YMEAFKPFLGIGLK	3	YMEAFKPFLGIGLK3	80648.5	95048.7	71899
D3ZI35	D3ZI35	D3ZI35_RAT	Cep135	Centrosomal protein 135	1	YMEDIQSNVK	YMEDIQSNVK	2	YMEDIQSNVK2	12067.9	5873.93	10522.9
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	YMEEMADTADAIEMATLDK	YMEEMADTADAIEMATLDK	3	YMEEMADTADAIEMATLDK3	11757.7	6178.76	7807.28
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	YMEEMADTADAIEMATLDKEMAEER	YMEEMADTADAIEMATLDKEMAEER	3	YMEEMADTADAIEMATLDKEMAEER3	7881.11	12537.2	4904.58
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	YMEENDQLK	YMEENDQLK	2	YMEENDQLK2	974431	974676	1.08698e+06
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	YMEENDQLKK	YMEENDQLKK	2	YMEENDQLKK2	74524.8	74268.8	67249.8
A0A0G2JXK2	A0A0G2JXK2	A0A0G2JXK2_RAT	Bcap31	B-cell receptor-associated protein	1	YMEENDQLKK	YMEENDQLKK	3	YMEENDQLKK3	662963	712700	747459
A0A8I6ACU9	A0A8I6ACU9	A0A8I6ACU9_RAT	Timm50	Mitochondrial import inner membrane translocase subunit TIM50	1	YMEGHHVK	YMEGHHVK	2	YMEGHHVK2			15180
A0A8I5Y0H0	A0A8I5Y0H0	A0A8I5Y0H0_RAT	Cul1	Cullin 1	1	YMELYTHVYNYCTSVHQSNQAR	YMELYTHVYNYC(UniMod:4)TSVHQSNQAR	4	YMELYTHVYNYC(UniMod:4)TSVHQSNQAR4	5879.31	6348.88	19062.7
D4A5S9	D4A5S9	D4A5S9_RAT	Prpf39	Pre-mRNA processing factor 39	1	YMENHSIEGVR	YMENHSIEGVR	3	YMENHSIEGVR3	7391.85	2659.92	
F1LYZ8	F1LYZ8	F1LYZ8_RAT	Ppp1r21	Protein phosphatase 1 regulatory subunit 21	1	YMETIEK	YMETIEK	2	YMETIEK2	4973.06	9276.61	12752.9
D3ZES7	A0A8I6AGW9;D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	0	YMFDFLDEQADK	YMFDFLDEQADK	2	YMFDFLDEQADK2	20293.1	17430	22962
P23711	P23711	HMOX2_RAT	Hmox2	Heme oxygenase 2	1	YMGDLSGGQVLK	YMGDLSGGQVLK	2	YMGDLSGGQVLK2	17274.4	15851.3	18302
P23711	P23711	HMOX2_RAT	Hmox2	Heme oxygenase 2	1	YMGDLSGGQVLKK	YMGDLSGGQVLKK	3	YMGDLSGGQVLKK3	5267.69	7265.38	6154.89
D3ZPE5	D3ZPE5	D3ZPE5_RAT	Vps53	Vacuolar protein sorting-associated protein 53 homolog	1	YMGIPQIR	YMGIPQIR	2	YMGIPQIR2	55820.7	65509.6	60126.2
P14740	P14740	DPP4_RAT	Dpp4	Dipeptidyl peptidase 4	1	YMGLPTPEDNLDHYR	YMGLPTPEDNLDHYR	3	YMGLPTPEDNLDHYR3	6789.82	13400.3	7881.23
Q08406	Q08406	CNTFR_RAT	Cntfr	Ciliary neurotrophic factor receptor subunit alpha	1	YMHLFSTIK	YMHLFSTIK	3	YMHLFSTIK3	1780.16		2017.1
Q05982	Q05982	NDKA_RAT	Nme1	Nucleoside diphosphate kinase A	1	YMHSGPVVAMVWEGLNVVK	YMHSGPVVAMVWEGLNVVK	3	YMHSGPVVAMVWEGLNVVK3	46903.6	41650.2	36122.9
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	YMLPEASILVTTR	YMLPEASILVTTR	2	YMLPEASILVTTR2	22855.7	17255.3	21305.6
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	YMLPEASILVTTRPSAIGR	YMLPEASILVTTRPSAIGR	3	YMLPEASILVTTRPSAIGR3	232421	246689	220756
P39052	P39052;Q08877	DYN2_RAT	Dnm2	Dynamin-2	0	YMLPLDNLK	YMLPLDNLK	2	YMLPLDNLK2	175748	149493	142391
D3ZUV9	D3ZUV9	D3ZUV9_RAT	Cnot3	CCR4-NOT transcription complex, subunit 3	1	YMMWFQR	YMMWFQR	2	YMMWFQR2	9475.59	5446.03	
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	YMNHMQSLR	YMNHMQSLR	2	YMNHMQSLR2	4392.03	5913.75	5283.73
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	YMNHMQSLR	YMNHMQSLR	3	YMNHMQSLR3	106394	132807	109960
P19804	P19804	NDKB_RAT	Nme2	Nucleoside diphosphate kinase B	1	YMNSGPVVAMVWEGLNVVK	YMNSGPVVAMVWEGLNVVK	3	YMNSGPVVAMVWEGLNVVK3	6193.24	10608.4	3704.39
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	YMNSVPK	YMNSVPK	1	YMNSVPK1	7918.29	4744.06	9442.9
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	YMNSVPK	YMNSVPK	2	YMNSVPK2	450155	493076	480444
A0A0G2K2C7	A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	1	YMPDICVIR	YMPDIC(UniMod:4)VIR	2	YMPDIC(UniMod:4)VIR2	247806	302148	312237
Q71UF4	Q71UF4	RBBP7_RAT	Rbbp7	Histone-binding protein RBBP7	1	YMPQNPHIIATK	YMPQNPHIIATK	3	YMPQNPHIIATK3	9501.12	8832.34	9527.59
M0R9J2	M0R9J2	M0R9J2_RAT	Pigg	GPI ethanolamine phosphate transferase 2	1	YMPYTTYLVEK	YMPYTTYLVEK	2	YMPYTTYLVEK2	2366.98	11006.3	8611.55
F7EYK0	F7EYK0	F7EYK0_RAT	Fkbp5	peptidylprolyl isomerase	1	YMQAVIQYGK	YMQAVIQYGK	2	YMQAVIQYGK2	9647.83	12003.9	14832.3
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	YMQMNHALFSLNGR	YMQMNHALFSLNGR	3	YMQMNHALFSLNGR3	21833.9	24022.1	16341.9
Q9Z1Y3	Q9Z1Y3	CADH2_RAT	Cdh2	Cadherin-2	1	YMQQNIR	YMQQNIR	2	YMQQNIR2	50762.4	43744.8	37237.9
A0A8I6G5Q1	A0A8I6G5Q1	A0A8I6G5Q1_RAT	Sema4d	Semaphorin 4D	1	YMQSATVEQSHTK	YMQSATVEQSHTK	2	YMQSATVEQSHTK2	1994.15		5208.35
A0A8I6G5Q1	A0A8I6G5Q1	A0A8I6G5Q1_RAT	Sema4d	Semaphorin 4D	1	YMQSATVEQSHTK	YMQSATVEQSHTK	3	YMQSATVEQSHTK3	5397.46	15507.8	12402.6
A0A8I6ABA8	A0A8I6ABA8	A0A8I6ABA8_RAT	Rabgef1	RAB guanine nucleotide exchange factor 1	1	YMSGQTSPR	YMSGQTSPR	2	YMSGQTSPR2	32914.7	35480.1	
Q62763	Q62762;Q62763;Q62761	KC1G3_RAT	Csnk1g3	Casein kinase I isoform gamma-3	0	YMSINTHLGK	YMSINTHLGK	3	YMSINTHLGK3	25325.1	28389.5	29391.1
A0A8I5Y8F2	A0A8I5Y8F2	A0A8I5Y8F2_RAT	Efemp2	EGF containing fibulin extracellular matrix protein 2	1	YMSITSER	YMSITSER	2	YMSITSER2	1.2849e+06	1.39605e+06	1.37664e+06
B2GUZ1	B2GUZ1	UBP4_RAT	Usp4	Ubiquitin carboxyl-terminal hydrolase 4	1	YMSNTYEQLSK	YMSNTYEQLSK	2	YMSNTYEQLSK2	32468.5	39202.2	41940.1
M0RAD5	M0RAD5	M0RAD5_RAT	Clpp	ATP-dependent Clp protease proteolytic subunit	1	YMSPMEAQEFGILDK	YMSPMEAQEFGILDK	2	YMSPMEAQEFGILDK2	17122	11654.1	21958.8
O88422	O88422	GALT5_RAT	Galnt5	Polypeptide N-acetylgalactosaminyltransferase 5	1	YMSQFPK	YMSQFPK	2	YMSQFPK2	14693.4	29815.3	21553.7
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	YMTISDEWDIPEK	YMTISDEWDIPEK	2	YMTISDEWDIPEK2	25250.4	16613.6	24565.1
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	YMTISDEWDIPEKQPFK	YMTISDEWDIPEKQPFK	3	YMTISDEWDIPEKQPFK3	45702.6	47131.3	26661.9
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	YMTVSGLPEPCIHHAR	YMTVSGLPEPC(UniMod:4)IHHAR	2	YMTVSGLPEPC(UniMod:4)IHHAR2	4600.98	4193.81	
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	YMTVSGLPEPCIHHAR	YMTVSGLPEPC(UniMod:4)IHHAR	3	YMTVSGLPEPC(UniMod:4)IHHAR3	112005	80199.6	77349
P20595	P20595	GCYB1_RAT	Gucy1b1	Guanylate cyclase soluble subunit beta-1	1	YMTVSGLPEPCIHHAR	YMTVSGLPEPC(UniMod:4)IHHAR	4	YMTVSGLPEPC(UniMod:4)IHHAR4	232372	284755	212938
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	YMVADKFTELQK	YMVADKFTELQK	2	YMVADKFTELQK2	1938.15	2165.09	4622.15
Q5XI34	Q5XI34	Q5XI34_RAT	Ppp2r1a	Protein phosphatase 2 scaffold subunit A alpha	1	YMVADKFTELQK	YMVADKFTELQK	3	YMVADKFTELQK3	35118.5	44538.9	45267.7
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	YMVLVPSQLYTDTPEK	YMVLVPSQLYTDTPEK	2	YMVLVPSQLYTDTPEK2	616599	705960	674892
A0A8I6AG69	A0A8I6AG69	A0A8I6AG69_RAT	Cpamd8	C3 and PZP-like, alpha-2-macroglobulin domain containing 8	1	YMVLVPSQLYTDTPEK	YMVLVPSQLYTDTPEK	3	YMVLVPSQLYTDTPEK3	43296	50930.4	31453
P14046	Q6IE52;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	YMVLVPSQLYTETPEK	YMVLVPSQLYTETPEK	2	YMVLVPSQLYTETPEK2	878361	746555	710416
P14046	Q6IE52;Q03626;P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	0	YMVLVPSQLYTETPEK	YMVLVPSQLYTETPEK	3	YMVLVPSQLYTETPEK3	25513	27895.2	25948.9
D3ZLS5	D3ZLS5	D3ZLS5_RAT	Hectd1	E3 ubiquitin-protein ligase	1	YMVPGAR	YMVPGAR	2	YMVPGAR2	76720.6	103805	61324.5
D4AB03	D4AB03	D4AB03_RAT	Fam120a	Family with sequence similarity 120A	1	YMVQWPGAR	YMVQWPGAR	2	YMVQWPGAR2	38969.4	31650.2	29131
F7EVW7	F7EVW7	F7EVW7_RAT	Gpaa1	Glycosylphosphatidylinositol anchor attachment 1	1	YMVSGTNVYGILR	YMVSGTNVYGILR	2	YMVSGTNVYGILR2	7599.23	4482.27	6934.78
Q6P7A2	Q6P7A2	UBE4A_RAT	Ube4a	Ubiquitin conjugation factor E4 A	1	YMWGTDSYR	YMWGTDSYR	2	YMWGTDSYR2	70189.5	83159.7	78567.9
A0A0G2JXT6	A0A0G2JXT6	MTMR6_RAT	Mtmr6	Myotubularin-related protein 6	1	YMYVVDTRPK	YMYVVDTRPK	3	YMYVVDTRPK3		3975.88	4465.39
Q9ESW0	Q9ESW0	DDB1_RAT	Ddb1	DNA damage-binding protein 1	1	YNACILEYK	YNAC(UniMod:4)ILEYK	2	YNAC(UniMod:4)ILEYK2	13822	13014	10471.8
Q6VV72	Q6VV72;A0A8I6A8I7	IF1A_RAT	Eif1a	Eukaryotic translation initiation factor 1A	0	YNADEAR	YNADEAR	1	YNADEAR1	360.372		
Q6VV72	Q6VV72;A0A8I6A8I7	IF1A_RAT	Eif1a	Eukaryotic translation initiation factor 1A	0	YNADEAR	YNADEAR	2	YNADEAR2	78426.5		87698.1
A0A0G2JU49	A0A0G2JU49	A0A0G2JU49_RAT	Mtx1	Metaxin 1	1	YNADYDLSAR	YNADYDLSAR	2	YNADYDLSAR2	16918.6	12891.7	6728.12
A0A0G2KA54	P08932;A0A0G2KA54	A0A0G2KA54_RAT	Kng1	Kininogen 1	0	YNAELESGNQFLLYR	YNAELESGNQFLLYR	2	YNAELESGNQFLLYR2	115339	112036	108790
A0A0G2KA54	P08932;A0A0G2KA54	A0A0G2KA54_RAT	Kng1	Kininogen 1	0	YNAELESGNQFLLYR	YNAELESGNQFLLYR	3	YNAELESGNQFLLYR3	21460.4	19449.9	19857.7
P01048	P01048	KNT1_RAT	Map1	T-kininogen 1	1	YNAELESGNQFVLYR	YNAELESGNQFVLYR	2	YNAELESGNQFVLYR2	148802	107851	110379
P01048	P01048	KNT1_RAT	Map1	T-kininogen 1	1	YNAELESGNQFVLYR	YNAELESGNQFVLYR	3	YNAELESGNQFVLYR3	35047.7	51941.5	48052.7
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	YNALCIK	YNALC(UniMod:4)IK	2	YNALC(UniMod:4)IK2	63399.1	58302.5	53792.9
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	YNALCIKDEERPCGDPPSFPHTILQGR	YNALC(UniMod:4)IKDEERPC(UniMod:4)GDPPSFPHTILQGR	4	YNALC(UniMod:4)IKDEERPC(UniMod:4)GDPPSFPHTILQGR4	23652.4	35317.2	15988.4
A0A8I5ZQ24	A0A8I5ZQ24	A0A8I5ZQ24_RAT	Atp6v1h	V-type proton ATPase subunit H	1	YNALLAVQK	YNALLAVQK	2	YNALLAVQK2	13216.6	12377.8	14961.1
O54924	O54924	EXOC8_RAT	Exoc8	Exocyst complex component 8	1	YNALYPLDR	YNALYPLDR	2	YNALYPLDR2	19944.6	21458.6	17079.1
A0A8I6ANR6	A0A8I6ANR6	A0A8I6ANR6_RAT	Chuk	IkappaB kinase	1	YNANLTK	YNANLTK	2	YNANLTK2		10891.5	11789.5
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	YNAPTSHVTPSVK	YNAPTSHVTPSVK	2	YNAPTSHVTPSVK2	4266.94	5049.78	8040.24
A0A8I6B3N0	A0A8I6B3N0	A0A8I6B3N0_RAT	Spag9	Sperm associated antigen 9	1	YNAPTSHVTPSVK	YNAPTSHVTPSVK	3	YNAPTSHVTPSVK3	106005	91811.5	101016
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	YNAYCCPGWK	YNAYC(UniMod:4)C(UniMod:4)PGWK	2	YNAYC(UniMod:4)C(UniMod:4)PGWK2	28475.9	30953	27411.9
F1LS86	F1LS86	F1LS86_RAT	Iars1	isoleucine--tRNA ligase	1	YNCFQECLK	YNC(UniMod:4)FQEC(UniMod:4)LK	2	YNC(UniMod:4)FQEC(UniMod:4)LK2	30411.9	25312.4	28707
Q80Z30	Q80Z30	PPM1E_RAT	Ppm1e	Protein phosphatase 1E	1	YNCPSFLAAALAR	YNC(UniMod:4)PSFLAAALAR	2	YNC(UniMod:4)PSFLAAALAR2	120014	141867	115389
Q80Z30	Q80Z30	PPM1E_RAT	Ppm1e	Protein phosphatase 1E	1	YNCPSFLAAALAR	YNC(UniMod:4)PSFLAAALAR	3	YNC(UniMod:4)PSFLAAALAR3	9068.38	14517.8	18924.5
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	YNCRPGYSR	YNC(UniMod:4)RPGYSR	2	YNC(UniMod:4)RPGYSR2	171811		200903
Q63514	Q63514	C4BPA_RAT	C4bpa	C4b-binding protein alpha chain	1	YNCRPGYSR	YNC(UniMod:4)RPGYSR	3	YNC(UniMod:4)RPGYSR3	1.12217e+07		1.48968e+07
P84817	P84817	FIS1_RAT	Fis1	Mitochondrial fission 1 protein	1	YNDDIRR	YNDDIRR	2	YNDDIRR2	5162.87		9740.9
D3ZUJ9	D3ZUJ9	D3ZUJ9_RAT	Snx8	Sorting nexin 8	1	YNDFVVFHEVLLHK	YNDFVVFHEVLLHK	4	YNDFVVFHEVLLHK4		1459.49	
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	YNDGSPGR	YNDGSPGR	2	YNDGSPGR2			148249
P62944	P52303;P62944;A0A8I6A4X2	AP2B1_RAT	Ap2b1	AP-2 complex subunit beta	0	YNDPIYVK	YNDPIYVK	2	YNDPIYVK2	144163	139847	153758
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	YNDQHIPGSPFTAR	YNDQHIPGSPFTAR	2	YNDQHIPGSPFTAR2	1.87425e+06	1.7003e+06	2.03874e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	YNDQHIPGSPFTAR	YNDQHIPGSPFTAR	3	YNDQHIPGSPFTAR3	6.7121e+06	7.15144e+06	8.46393e+06
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	YNDTFWK	YNDTFWK	1	YNDTFWK1	70925.5	57060.3	56573.5
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	YNDTFWK	YNDTFWK	2	YNDTFWK2	1.55632e+06	2.09617e+06	2.03431e+06
G3V6W5	G3V6W5	G3V6W5_RAT	Ifih1	RNA helicase	1	YNEALQINDTIR	YNEALQINDTIR	2	YNEALQINDTIR2	3370.43	5165.13	
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	YNEDDAK	YNEDDAK	2	YNEDDAK2			22905.1
P17220	P17220	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	1	YNEDLELEDAIHTAILTLK	YNEDLELEDAIHTAILTLK	3	YNEDLELEDAIHTAILTLK3	218563	244837	142706
P17220	P17220	PSA2_RAT	Psma2	Proteasome subunit alpha type-2	1	YNEDLELEDAIHTAILTLK	YNEDLELEDAIHTAILTLK	4	YNEDLELEDAIHTAILTLK4	4703.98	1126.48	2988.52
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	YNEETFGYEVPVK	YNEETFGYEVPVK	2	YNEETFGYEVPVK2	8176.3	14017.2	16027.5
Q5FVQ4	Q5FVQ4	MLEC_RAT	Mlec	Malectin	1	YNEETFGYEVPVKEEGDYVLVLK	YNEETFGYEVPVKEEGDYVLVLK	3	YNEETFGYEVPVKEEGDYVLVLK3	42111.4	50901.8	55269.6
Q68FS2	Q68FS2	CSN4_RAT	Cops4	COP9 signalosome complex subunit 4	1	YNELSYK	YNELSYK	2	YNELSYK2	110188	101469	120430
P02770	P02770	ALBU_RAT	Alb	Albumin	1	YNEVLTQCCTESDK	YNEVLTQC(UniMod:4)C(UniMod:4)TESDK	2	YNEVLTQC(UniMod:4)C(UniMod:4)TESDK2	95072.4	100670	406502
P02770	P02770	ALBU_RAT	Alb	Albumin	1	YNEVLTQCCTESDK	YNEVLTQC(UniMod:4)C(UniMod:4)TESDK	3	YNEVLTQC(UniMod:4)C(UniMod:4)TESDK3	1.44835e+06	1.49789e+06	1.67401e+06
P02770	P02770	ALBU_RAT	Alb	Albumin	1	YNEVLTQCCTESDKAACLTPK	YNEVLTQC(UniMod:4)C(UniMod:4)TESDKAAC(UniMod:4)LTPK	3	YNEVLTQC(UniMod:4)C(UniMod:4)TESDKAAC(UniMod:4)LTPK3	3396.3	6643.61	8120.55
Q920L7	Q920L7	ELOV5_RAT	Elovl5	Elongation of very long chain fatty acids protein 5	1	YNFFCQGTR	YNFFC(UniMod:4)QGTR	2	YNFFC(UniMod:4)QGTR2	80394.9	81437.4	92110.2
A0A8I6AR12	A0A8I6AR12	A0A8I6AR12_RAT	Cct7	T-complex protein 1 subunit eta	1	YNFFTGCPK	YNFFTGC(UniMod:4)PK	2	YNFFTGC(UniMod:4)PK2	416153	413361	452495
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	YNFHGTAEQDLPFCK	YNFHGTAEQDLPFC(UniMod:4)K	2	YNFHGTAEQDLPFC(UniMod:4)K2	3614.49	4923.88	3438.32
P32577	P32577	CSK_RAT	Csk	Tyrosine-protein kinase CSK	1	YNFHGTAEQDLPFCK	YNFHGTAEQDLPFC(UniMod:4)K	3	YNFHGTAEQDLPFC(UniMod:4)K3	84167.4	83892.1	87246.9
Q9QZK5	Q9QZK5	HTRA1_RAT	Htra1	Serine protease HTRA1	1	YNFIADVVEK	YNFIADVVEK	2	YNFIADVVEK2	25750	25778.1	31055.7
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	YNFILQIAK	YNFILQIAK	2	YNFILQIAK2	1.81825e+06	1.97714e+06	2.00739e+06
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	YNFPNPNPFVEDDMDK	YNFPNPNPFVEDDMDK	2	YNFPNPNPFVEDDMDK2	114321	101251	99279.7
Q6AYK8	Q6AYK8	EIF3D_RAT	Eif3d	Eukaryotic translation initiation factor 3 subunit D	1	YNFPNPNPFVEDDMDK	YNFPNPNPFVEDDMDK	3	YNFPNPNPFVEDDMDK3	11317.9	6882.68	6744.86
Q5EBC0	Q5EBC0	Q5EBC0_RAT	Itih4	Inter-alpha-trypsin inhibitor heavy chain 4	1	YNFQHHFK	YNFQHHFK	2	YNFQHHFK2	113626	94115.7	96567.5
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	YNFQYELVQYK	YNFQYELVQYK	2	YNFQYELVQYK2	25090.7	21092.9	22213.4
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	YNFQYELVQYK	YNFQYELVQYK	3	YNFQYELVQYK3	5006.17	6300.74	1608.97
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	YNGATYQNDIALVEMK	YNGATYQNDIALVEMK	2	YNGATYQNDIALVEMK2	46432.8	48186	50850.2
Q9WUW3	Q9WUW3	CFAI_RAT	Cfi	Complement factor I	1	YNGATYQNDIALVEMK	YNGATYQNDIALVEMK	3	YNGATYQNDIALVEMK3	23458.7	25833.2	23629.8
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	YNGAVNEIK	YNGAVNEIK	2	YNGAVNEIK2	43676.5	51367.6	35585.4
P0C219	P0C219	SLMAP_RAT	Slmap	Sarcolemmal membrane-associated protein	1	YNGAVNEIKDLSDK	YNGAVNEIKDLSDK	3	YNGAVNEIKDLSDK3	17309.5	17990.4	20964.8
D3ZBP3	D3ZBP3	D3ZBP3_RAT	Exosc2	Ribosomal RNA-processing protein 4	1	YNGEVGDIVVGR	YNGEVGDIVVGR	2	YNGEVGDIVVGR2	3356.58		
A0A8I6G5Q1	A0A8I6G5Q1	A0A8I6G5Q1_RAT	Sema4d	Semaphorin 4D	1	YNGPVPTPR	YNGPVPTPR	2	YNGPVPTPR2	17687.7	14507.1	22467.4
P12785	P12785	FAS_RAT	Fasn	Fatty acid synthase	1	YNGTLNLDR	YNGTLNLDR	2	YNGTLNLDR2	9956.22	16232.4	13140.9
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	YNHAACFGLQPGCLLPDGSR	YNHAAC(UniMod:4)FGLQPGC(UniMod:4)LLPDGSR	3	YNHAAC(UniMod:4)FGLQPGC(UniMod:4)LLPDGSR3	6772.84	13221	6551.54
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	YNHIDESEMK	YNHIDESEMK	2	YNHIDESEMK2	12559.9	6875.67	4605.89
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	YNHIDESEMK	YNHIDESEMK	3	YNHIDESEMK3	19670.5	12387.2	17273.4
Q66HA8	Q66HA8	HS105_RAT	Hsph1	Heat shock protein 105 kDa	1	YNHIDESEMKK	YNHIDESEMKK	3	YNHIDESEMKK3	2960.32	7532.38	9378.96
Q5PPK9	Q5PPK9	EIPR1_RAT	Eipr1	EARP and GARP complex-interacting protein 1	1	YNHSHDQLVLTGSSDSR	YNHSHDQLVLTGSSDSR	3	YNHSHDQLVLTGSSDSR3	18360.8	25752.8	21820.1
Q5PPK9	Q5PPK9	EIPR1_RAT	Eipr1	EARP and GARP complex-interacting protein 1	1	YNHSHDQLVLTGSSDSR	YNHSHDQLVLTGSSDSR	4	YNHSHDQLVLTGSSDSR4	22923.2	27963.4	26093.6
P63170	P63170;A0A8I6AP61	DYL1_RAT	Dynll1	Dynein light chain 1, cytoplasmic	0	YNIEKDIAAHIK	YNIEKDIAAHIK	3	YNIEKDIAAHIK3	2945.17	10726.9	7441.11
Q78P75	Q78P75	DYL2_RAT	Dynll2	Dynein light chain 2, cytoplasmic	1	YNIEKDIAAYIK	YNIEKDIAAYIK	3	YNIEKDIAAYIK3	7208.61	6593.2	6478.74
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	YNIELDPR	YNIELDPR	2	YNIELDPR2	31446.7	33882.6	32378.1
P81795	C9WPN6;P81795	IF2G_RAT	Eif2s3	Eukaryotic translation initiation factor 2 subunit 3, X-linked	0	YNIEVVCEYIVK	YNIEVVC(UniMod:4)EYIVK	2	YNIEVVC(UniMod:4)EYIVK2	16155	12740.6	10292.5
Q6IMY8	Q6IMY8	HNRPU_RAT	Hnrnpu	Heterogeneous nuclear ribonucleoprotein U	1	YNILGTNTIMDK	YNILGTNTIMDK	2	YNILGTNTIMDK2	4215.81	2575.75	3846.4
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	YNILPEAEGEAPFTLK	YNILPEAEGEAPFTLK	2	YNILPEAEGEAPFTLK2	1.05604e+07	8.94645e+06	9.45583e+06
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	YNILPEAEGEAPFTLK	YNILPEAEGEAPFTLK	3	YNILPEAEGEAPFTLK3	2.19933e+06	2.10075e+06	2.22211e+06
P70569	P70569	MYO5B_RAT	Myo5b	Unconventional myosin-Vb	1	YNISQLEEWLR	YNISQLEEWLR	2	YNISQLEEWLR2	8369.49	7312.94	
G3V762	G3V762	G3V762_RAT	Gfus	GDP-L-fucose synthase	1	YNLDFWR	YNLDFWR	2	YNLDFWR2	48586.9	30218.3	43124.6
D3ZF32	D3ZF32	D3ZF32_RAT	Treml2	Triggering receptor expressed on myeloid cells-like 2	1	YNLDSNYAK	YNLDSNYAK	2	YNLDSNYAK2	15100.9	13401.8	12482.4
Q2M2R8	Q2M2R8	PEX5_RAT	Pex5	Peroxisomal targeting signal 1 receptor	1	YNLGISCINLGAHR	YNLGISC(UniMod:4)INLGAHR	3	YNLGISC(UniMod:4)INLGAHR3	4460.84		
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	YNLGLDLR	YNLGLDLR	2	YNLGLDLR2	231126	185801	210655
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	YNLIAVSNHYGGMGGGHYTAFAK	YNLIAVSNHYGGMGGGHYTAFAK	3	YNLIAVSNHYGGMGGGHYTAFAK3	28867.5	31110.5	31874.6
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	YNLIAVSNHYGGMGGGHYTAFAK	YNLIAVSNHYGGMGGGHYTAFAK	4	YNLIAVSNHYGGMGGGHYTAFAK4	18140	36557.4	30516
F1LYU4	F1LYU4	F1LYU4_RAT	ENSRNOG00000071026	Ig-like domain-containing protein	1	YNLMHWYQQK	YNLMHWYQQK	3	YNLMHWYQQK3	9762.95	5116.87	8283.01
F1LYU4	F1LYU4	F1LYU4_RAT	ENSRNOG00000071026	Ig-like domain-containing protein	1	YNLMHWYQQKPGQQPK	YNLMHWYQQKPGQQPK	3	YNLMHWYQQKPGQQPK3	14470.9	11705.9	
F1LYU4	F1LYU4	F1LYU4_RAT	ENSRNOG00000071026	Ig-like domain-containing protein	1	YNLMHWYQQKPGQQPK	YNLMHWYQQKPGQQPK	4	YNLMHWYQQKPGQQPK4	16476	23984.8	13446.3
P03994	P03994	HPLN1_RAT	Hapln1	Hyaluronan and proteoglycan link protein 1	1	YNLNFHEAR	YNLNFHEAR	3	YNLNFHEAR3	6186.45	6513.13	6853.55
Q6IE52	Q6IE52;A0A8I6AG69	MUG2_RAT	Mug2	Murinoglobulin-2	0	YNLPLEK	YNLPLEK	2	YNLPLEK2	1.6661e+06	1.81257e+06	1.45823e+06
P97573	P97573	SHIP1_RAT	Inpp5d	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1	1	YNLPSWCDR	YNLPSWC(UniMod:4)DR	2	YNLPSWC(UniMod:4)DR2	65425.9	66061.2	75734.9
D4A4P4	D4A4P4	D4A4P4_RAT	Flad1	FAD synthase	1	YNLQMLEAEGNMK	YNLQMLEAEGNMK	2	YNLQMLEAEGNMK2	9337.57	4456.59	
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	YNLTNTVVCR	YNLTNTVVC(UniMod:4)R	2	YNLTNTVVC(UniMod:4)R2	5512.47		9505.02
G3V619	G3V619	G3V619_RAT	Ascc1	Activating signal cointegrator 1 complex subunit 1	1	YNLYTADGK	YNLYTADGK	2	YNLYTADGK2	26629.6	21472.7	23399.1
A0A0G2JYR5	A0A0G2JYR5	A0A0G2JYR5_RAT	Arhgap1	Rho GTPase activating protein 1	1	YNMGLPVDFDQYNELHLPAVILK	YNMGLPVDFDQYNELHLPAVILK	3	YNMGLPVDFDQYNELHLPAVILK3	63949.2	61817	79189.1
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	YNMPLEK	YNMPLEK	1	YNMPLEK1	110935	71880.7	61087.8
Q03626	Q03626	MUG1_RAT	Mug1	Murinoglobulin-1	1	YNMPLEK	YNMPLEK	2	YNMPLEK2	6.01633e+06	4.27371e+06	3.90629e+06
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	YNNGSTELHSSSVGLAK	YNNGSTELHSSSVGLAK	3	YNNGSTELHSSSVGLAK3	3422	4245.92	4062.58
Q68FW9	Q68FW9	CSN3_RAT	Cops3	COP9 signalosome complex subunit 3	1	YNNPAMLHNIDQEMLK	YNNPAMLHNIDQEMLK	2	YNNPAMLHNIDQEMLK2	5241.56	5427.9	5325.6
Q68FW9	Q68FW9	CSN3_RAT	Cops3	COP9 signalosome complex subunit 3	1	YNNPAMLHNIDQEMLK	YNNPAMLHNIDQEMLK	3	YNNPAMLHNIDQEMLK3	73616.2	96438.4	68667.6
F1LZX9	F1LZX9	F1LZX9_RAT	Itgav	Integrin subunit alpha V	1	YNNQLATR	YNNQLATR	2	YNNQLATR2	246843	238307	234613
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	YNNVLPYDISR	YNNVLPYDISR	2	YNNVLPYDISR2	511753	522747	507770
A0A8I5ZX76	A0A8I5ZX76	A0A8I5ZX76_RAT	Eif3k	Eukaryotic translation initiation factor 3 subunit K	1	YNPENLATLER	YNPENLATLER	2	YNPENLATLER2	318866	258448	361996
Q9JJ05	Q9JJ05	C1GLT_RAT	C1galt1	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1	1	YNPEQPIYFGR	YNPEQPIYFGR	2	YNPEQPIYFGR2	22094.5	19513.7	24140.2
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	YNPGYVLAGR	YNPGYVLAGR	2	YNPGYVLAGR2	20373.6	16811.2	34119
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	YNPIGESVLR	YNPIGESVLR	2	YNPIGESVLR2	283015	303041	332083
A0A8I6A3T8	A0A8I6A3T8	A0A8I6A3T8_RAT	Bltp3a	UHRF1 binding protein 1	1	YNPLFEL	YNPLFEL	1	YNPLFEL1	8842.77	8897.54	10974.3
P43424	P43424	GALT_RAT	Galt	Galactose-1-phosphate uridylyltransferase	1	YNPLQDEWVLVSAHR	YNPLQDEWVLVSAHR	3	YNPLQDEWVLVSAHR3	4794	9364	8036.76
P07340	P07340	AT1B1_RAT	Atp1b1	Sodium/potassium-transporting ATPase subunit beta-1	1	YNPNVLPVQCTGK	YNPNVLPVQC(UniMod:4)TGK	2	YNPNVLPVQC(UniMod:4)TGK2	11410.1	11523.6	10059.7
Q5M9G8	Q5M9G8	DCA11_RAT	Dcaf11	DDB1- and CUL4-associated factor 11	1	YNPPVDATPDTR	YNPPVDATPDTR	2	YNPPVDATPDTR2	52119	46606.8	34304.5
Q78P75	P63170;Q78P75	DYL2_RAT	Dynll2	Dynein light chain 2, cytoplasmic	0	YNPTWHCIVGR	YNPTWHC(UniMod:4)IVGR	2	YNPTWHC(UniMod:4)IVGR2	94145	87099.2	78995.4
Q78P75	P63170;Q78P75	DYL2_RAT	Dynll2	Dynein light chain 2, cytoplasmic	0	YNPTWHCIVGR	YNPTWHC(UniMod:4)IVGR	3	YNPTWHC(UniMod:4)IVGR3	396360	378857	409557
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	YNQATPIFHQWR	YNQATPIFHQWR	2	YNQATPIFHQWR2	98893.4	88933.3	83861.5
F7EWC1	F7EWC1	F7EWC1_RAT	Vasp	Vasodilator-stimulated phosphoprotein	1	YNQATPIFHQWR	YNQATPIFHQWR	3	YNQATPIFHQWR3	358356	317488	363260
P42335	P42335	IP3KB_RAT	Itpkb	Inositol-trisphosphate 3-kinase B	1	YNQMDDLLADFDSPCVMDCK	YNQMDDLLADFDSPC(UniMod:4)VMDC(UniMod:4)K	3	YNQMDDLLADFDSPC(UniMod:4)VMDC(UniMod:4)K3	3577.17	4411.11	2775.79
Q66HG5	Q66HG5	TM9S2_RAT	Tm9sf2	Transmembrane 9 superfamily member 2	1	YNQMDSTEDAQEEFGWK	YNQMDSTEDAQEEFGWK	3	YNQMDSTEDAQEEFGWK3	2446.94		
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	YNQPFFVTSLPDDK	YNQPFFVTSLPDDK	2	YNQPFFVTSLPDDK2	34552.3	28074.6	27674.6
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	YNQPFFVTSLPDDKIPK	YNQPFFVTSLPDDKIPK	3	YNQPFFVTSLPDDKIPK3	32740.3	31433.7	31360.8
A0A8I6ABE7	A0A8I6ABE7	A0A8I6ABE7_RAT	Xpr1	Xenotropic and polytropic retrovirus receptor 1	1	YNQSISLR	YNQSISLR	2	YNQSISLR2	5892.05	7651.44	8785.92
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	YNRDFESHITNYK	YNRDFESHITNYK	3	YNRDFESHITNYK3	3925.27	3873.69	5490.49
B5DFC8	B5DFC8	EIF3C_RAT	Eif3c	Eukaryotic translation initiation factor 3 subunit C	1	YNRDFESHITNYK	YNRDFESHITNYK	4	YNRDFESHITNYK4	4848.79	5312.85	10163
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	YNSDLVQK	YNSDLVQK	2	YNSDLVQK2	89282	97376.4	110265
Q99MS0	Q99MS0	S14L2_RAT	Sec14l2	SEC14-like protein 2	1	YNSHMVPEDGTLTCSEPGIYVLR	YNSHMVPEDGTLTC(UniMod:4)SEPGIYVLR	3	YNSHMVPEDGTLTC(UniMod:4)SEPGIYVLR3	6331.19	7252.4	9014.96
A0A8I5ZKD4	A0A8I5ZKD4	A0A8I5ZKD4_RAT	Nhlrc3	NHL repeat containing 3	1	YNSLGDLVQVLGTPGK	YNSLGDLVQVLGTPGK	2	YNSLGDLVQVLGTPGK2	12418	14979.2	15485.5
A0A8I5ZKD4	A0A8I5ZKD4	A0A8I5ZKD4_RAT	Nhlrc3	NHL repeat containing 3	1	YNSLGDLVQVLGTPGKK	YNSLGDLVQVLGTPGKK	3	YNSLGDLVQVLGTPGKK3	3304.4	5206.18	5145.45
D3ZZC1	D3ZZC1	D3ZZC1_RAT	Txndc5	protein disulfide-isomerase	1	YNSMEDAK	YNSMEDAK	2	YNSMEDAK2		15320.4	
A0A0G2K1D2	A0A0G2K1D2	A0A0G2K1D2_RAT	Rap1gds1	Rap1 GTPase-GDP dissociation stimulator 1	1	YNSMVLICALMGSEALHK	YNSMVLIC(UniMod:4)ALMGSEALHK	3	YNSMVLIC(UniMod:4)ALMGSEALHK3	3837.44	8092.25	8378.8
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	YNSWPSSLQELLR	YNSWPSSLQELLR	2	YNSWPSSLQELLR2	15749.8	32757.9	22496.7
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	YNSWPSSLQELLRPTFPGVIR	YNSWPSSLQELLRPTFPGVIR	3	YNSWPSSLQELLRPTFPGVIR3	282993	337192	279127
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	YNTIETFNELFDAHK	YNTIETFNELFDAHK	3	YNTIETFNELFDAHK3	5228.2	5403.77	5152.96
A0A0G2JZ48	A0A0G2JZ48	A0A0G2JZ48_RAT	Tmf1	TATA element modulatory factor 1	1	YNTILQMYGEK	YNTILQMYGEK	2	YNTILQMYGEK2	4288.22	5096.11	3100.05
D4A917	D4A917	D4A917_RAT	Ltbp4	Latent transforming growth factor beta binding protein 4	1	YNTRPLNPDPPR	YNTRPLNPDPPR	3	YNTRPLNPDPPR3	202626	228334	202329
F1M332	F1M332	F1M332_RAT	Arhgap28	Rho GTPase activating protein 28	1	YNTYTQTLR	YNTYTQTLR	2	YNTYTQTLR2	1435.19	3727.33	4220.78
Q9QYM2	Q9QYM2	PARG_RAT	Parg	Poly(ADP-ribose) glycohydrolase	1	YNVAYSK	YNVAYSK	1	YNVAYSK1		682232	634859
G3V7M0	G3V7M0	G3V7M0_RAT	Cnot1	CCR4-NOT transcription complex, subunit 1	1	YNVEAVELLIR	YNVEAVELLIR	2	YNVEAVELLIR2	3947.18	2572.43	
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	YNVISHDSIQISWK	YNVISHDSIQISWK	3	YNVISHDSIQISWK3			10359.4
A0A8I5ZXX6	A0A8I5ZXX6	A0A8I5ZXX6_RAT	Atp8a1	Phospholipid-transporting ATPase	1	YNVITFLPR	YNVITFLPR	2	YNVITFLPR2	173815	168782	161635
Q05702	Q05702	SG1C1_RAT	Scgb1c1	Secretoglobin family 1C member 1	1	YNVNDMAK	YNVNDMAK	2	YNVNDMAK2	24638.5	15069.4	19382.7
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	YNVPLEK	YNVPLEK	1	YNVPLEK1	4.81883e+06	4.09127e+06	4.08252e+06
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	YNVPLEK	YNVPLEK	2	YNVPLEK2	2.39974e+08	1.94702e+08	2.02106e+08
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	YNVPLEKQQPAFALK	YNVPLEKQQPAFALK	2	YNVPLEKQQPAFALK2	6689.39	5326.33	3387.64
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	YNVPLEKQQPAFALK	YNVPLEKQQPAFALK	3	YNVPLEKQQPAFALK3	249379	174467	152788
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	YNVPLEKQQPAFALKVQTVPLTCNNPK	YNVPLEKQQPAFALKVQTVPLTC(UniMod:4)NNPK	4	YNVPLEKQQPAFALKVQTVPLTC(UniMod:4)NNPK4	320655	273762	231228
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	YNVPLNR	YNVPLNR	2	YNVPLNR2	144579	111308	138284
Q9QYF3	Q9QYF3	MYO5A_RAT	Myo5a	Unconventional myosin-Va	1	YNVSQLEEWLR	YNVSQLEEWLR	2	YNVSQLEEWLR2	6970.57	3446.86	3913.07
A0A8I6GJ92	A0A8I6GJ92	A0A8I6GJ92_RAT	Eprs1	Glutamyl-prolyl-tRNA synthetase	1	YNVYPTYDFACPIVDSIEGVTHALR	YNVYPTYDFAC(UniMod:4)PIVDSIEGVTHALR	3	YNVYPTYDFAC(UniMod:4)PIVDSIEGVTHALR3	27182.8	16665.1	34808.7
P18292	P18292	THRB_RAT	F2	Prothrombin	1	YNWRENLDR	YNWRENLDR	2	YNWRENLDR2	9524.27	16157.5	6206.86
P18292	P18292	THRB_RAT	F2	Prothrombin	1	YNWRENLDR	YNWRENLDR	3	YNWRENLDR3	506871	467950	525372
P18292	P18292	THRB_RAT	F2	Prothrombin	1	YNWRENLDRDIALLK	YNWRENLDRDIALLK	3	YNWRENLDRDIALLK3	112652	127697	143516
P18292	P18292	THRB_RAT	F2	Prothrombin	1	YNWRENLDRDIALLK	YNWRENLDRDIALLK	4	YNWRENLDRDIALLK4	34335.2	49519.6	57927.3
D3Z7Z5	D3Z7Z5	D3Z7Z5_RAT	Ranbp10	RAN binding protein 10	1	YNYIGLSQGNLR	YNYIGLSQGNLR	2	YNYIGLSQGNLR2	12170.2	6234.5	4396.45
Q05096	Q05096	MYO1B_RAT	Myo1b	Unconventional myosin-Ib	1	YNYLSLDSAK	YNYLSLDSAK	2	YNYLSLDSAK2	10909.5	5805.75	9057.51
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	YNYTSEEK	YNYTSEEK	2	YNYTSEEK2	11702.6	17486.3	17727.3
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	YNYTTEEK	YNYTTEEK	2	YNYTTEEK2	52777.3	59928.7	56747.9
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	YNYYYNTDSK	YNYYYNTDSK	2	YNYYYNTDSK2	40898.5	50622.4	48186.9
A0A8I5ZLY7	A0A8I5ZLY7	A0A8I5ZLY7_RAT	Tapbp	TAP binding protein	1	YPAGAHAPHCEMSSYIPFPASAK	YPAGAHAPHC(UniMod:4)EMSSYIPFPASAK	4	YPAGAHAPHC(UniMod:4)EMSSYIPFPASAK4	70035.9	67267.1	84279.3
Q63598	Q63598	PLST_RAT	Pls3	Plastin-3	1	YPALTKPENQDIDWTLLEGETR	YPALTKPENQDIDWTLLEGETR	3	YPALTKPENQDIDWTLLEGETR3	2347.28	3173.07	2570.38
B2RYF7	B2RYF7	WASH1_RAT	Washc1	WASH complex subunit 1	1	YPAPEHLQEYNSVFTGALDPGLQR	YPAPEHLQEYNSVFTGALDPGLQR	3	YPAPEHLQEYNSVFTGALDPGLQR3	26336	28325.9	23932.4
P62703	D3ZX01;P62703	RS4X_RAT	Rps4x	Small ribosomal subunit protein eS4	0	YPDPLIK	YPDPLIK	2	YPDPLIK2	54339.7	40771.4	45259.3
P60522	P60517;Q0VGK0;P60522	GBRL2_RAT	Gabarapl2	Gamma-aminobutyric acid receptor-associated protein-like 2	0	YPDRVPVIVEK	YPDRVPVIVEK	3	YPDRVPVIVEK3	16476	16727.6	
F7F5P9	F7F5P9	F7F5P9_RAT	G3bp2	G3BP stress granule assembly factor 2	1	YPDSHQLFVGNLPHDIDENELK	YPDSHQLFVGNLPHDIDENELK	4	YPDSHQLFVGNLPHDIDENELK4	31045.5	10281.5	6401.27
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	YPDYESK	YPDYESK	2	YPDYESK2	27099.4	14188.7	20301.9
Q7M767	A0A8I6A3Q1;A0A8I6AT35;Q7M767	UB2V2_RAT	Ube2v2	Ubiquitin-conjugating enzyme E2 variant 2	0	YPEAPPSVR	YPEAPPSVR	2	YPEAPPSVR2	43629.4	28552.6	30786.5
D4A6D9	D4A6D9	D4A6D9_RAT	Hs1bp3	HCLS1 binding protein 3	1	YPEASLPPLPR	YPEASLPPLPR	2	YPEASLPPLPR2	8190.75	4656.56	4185.77
Q5M871	Q5M871	FAIM3_RAT	Fcmr	Fas apoptotic inhibitory molecule 3	1	YPEELPWLK	YPEELPWLK	2	YPEELPWLK2	316386	363892	312248
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	YPEGSPEER	YPEGSPEER	2	YPEGSPEER2	10453	20013.7	10728.1
P62138	P62138;P63088;P62142	PP1A_RAT	Ppp1ca	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	0	YPENFFLLR	YPENFFLLR	2	YPENFFLLR2	82175.6	56119.2	63096.5
D3ZJH9	D3ZJH9	D3ZJH9_RAT	Me2	Malic enzyme	1	YPEPEDK	YPEPEDK	2	YPEPEDK2	19992.6	24585	24926.8
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	YPESLRPAFPR	YPESLRPAFPR	3	YPESLRPAFPR3	382150	468414	454648
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	YPEYDGR	YPEYDGR	2	YPEYDGR2	98586.3	79716.4	88799
O55166	O55166	VPS52_RAT	Vps52	Vacuolar protein sorting-associated protein 52 homolog	1	YPFEALFR	YPFEALFR	2	YPFEALFR2	12586.1	14945.4	17594
P21588	P21588	5NTD_RAT	Nt5e	5'-nucleotidase	1	YPFIVTSDDGR	YPFIVTSDDGR	2	YPFIVTSDDGR2	6635.25	9547.89	10641.5
Q9WVH8	Q9WVH8	FBLN5_RAT	Fbln5	Fibulin-5	1	YPGAYYIFQIK	YPGAYYIFQIK	2	YPGAYYIFQIK2	952214	869686	881202
Q9WVH8	Q9WVH8	FBLN5_RAT	Fbln5	Fibulin-5	1	YPGAYYIFQIK	YPGAYYIFQIK	3	YPGAYYIFQIK3	20492.3	28586.7	26937.3
A0A8I5ZN24	A0A8I5ZN24	A0A8I5ZN24_RAT	Dhrs7	Dehydrogenase/reductase 7	1	YPGITLCNVYPGPVQSNVVK	YPGITLC(UniMod:4)NVYPGPVQSNVVK	3	YPGITLC(UniMod:4)NVYPGPVQSNVVK3	28963.3	29441.4	39309.4
Q68FP2	Q68FP2	PON3_RAT	Pon3	Serum paraoxonase/lactonase 3	1	YPGMPSFAPDKPGR	YPGMPSFAPDKPGR	3	YPGMPSFAPDKPGR3	58548.2	37052.1	67964.9
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	YPGQLEIVCR	YPGQLEIVC(UniMod:4)R	2	YPGQLEIVC(UniMod:4)R2	13777.8	11962.5	12723.3
P83888	P83888;A0A8I6A5N2	TBG1_RAT	Tubg1	Tubulin gamma-1 chain	0	YPGYMNNDLIGLIASLIPTPR	YPGYMNNDLIGLIASLIPTPR	3	YPGYMNNDLIGLIASLIPTPR3	5275.01		
Q5FVL2	Q5FVL2	EMC8_RAT	Emc8	ER membrane protein complex subunit 8	1	YPHCAVNGLLVAER	YPHC(UniMod:4)AVNGLLVAER	2	YPHC(UniMod:4)AVNGLLVAER2	7480.54		9789.01
Q5FVL2	Q5FVL2	EMC8_RAT	Emc8	ER membrane protein complex subunit 8	1	YPHCAVNGLLVAER	YPHC(UniMod:4)AVNGLLVAER	3	YPHC(UniMod:4)AVNGLLVAER3	68587.9	69547.3	60877
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	YPHNLDCTFTILAK	YPHNLDC(UniMod:4)TFTILAK	2	YPHNLDC(UniMod:4)TFTILAK2	10388.9	11177.2	11598.3
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	YPHNLDCTFTILAK	YPHNLDC(UniMod:4)TFTILAK	3	YPHNLDC(UniMod:4)TFTILAK3	35633.3	34588.6	24741.6
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	YPHNLDCTFTILAKPR	YPHNLDC(UniMod:4)TFTILAKPR	3	YPHNLDC(UniMod:4)TFTILAKPR3	9781.65	9066.49	8570.76
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	YPHNLDCTFTILAKPR	YPHNLDC(UniMod:4)TFTILAKPR	4	YPHNLDC(UniMod:4)TFTILAKPR4	24211.8	25578.1	41531.3
A0A8I5ZTX9	A0A8I5ZTX9	A0A8I5ZTX9_RAT	C2h1orf162	Hypothetical LOC100363228	1	YPHSEPPTK	YPHSEPPTK	2	YPHSEPPTK2	68489		50643.2
F1LPQ2	F1LPQ2	ASCC3_RAT	Ascc3	Activating signal cointegrator 1 complex subunit 3	1	YPHVYDSQAAAR	YPHVYDSQAAAR	3	YPHVYDSQAAAR3	17571.5	19937.8	10460.5
P24155	P24155	THOP1_RAT	Thop1	Thimet oligopeptidase	1	YPHYFPLLK	YPHYFPLLK	3	YPHYFPLLK3	12769	7049.04	8178.59
P42676	P42676	NEUL_RAT	Nln	Neurolysin, mitochondrial	1	YPHYFPVMK	YPHYFPVMK	3	YPHYFPVMK3	11414.2	4316.26	7577.02
Q62656	Q62656	PTPRZ_RAT	Ptprz1	Receptor-type tyrosine-protein phosphatase zeta	1	YPICNSPK	YPIC(UniMod:4)NSPK	2	YPIC(UniMod:4)NSPK2	11937.3	18397.3	16157.1
P68136	P63269;P68136;P68035;P62738	ACTS_RAT	Acta1	Actin, alpha skeletal muscle	0	YPIEHGIITNWDDMEK	YPIEHGIITNWDDMEK	3	YPIEHGIITNWDDMEK3	1.98938e+07	1.86536e+07	1.99823e+07
P60711	P60711;P63259	ACTB_RAT	Actb	Actin, cytoplasmic 1	0	YPIEHGIVTNWDDMEK	YPIEHGIVTNWDDMEK	2	YPIEHGIVTNWDDMEK2	7192.26	2663.74	5885.43
P60711	P60711;P63259	ACTB_RAT	Actb	Actin, cytoplasmic 1	0	YPIEHGIVTNWDDMEK	YPIEHGIVTNWDDMEK	3	YPIEHGIVTNWDDMEK3	96711.3	91103.8	89553.7
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	YPIHWHLLGDLQFK	YPIHWHLLGDLQFK	3	YPIHWHLLGDLQFK3	20545.6	13645.9	7290.17
D4A9R2	D4A9R2	D4A9R2_RAT	Pkhd1l1	PKHD1 like 1	1	YPIHWHLLGDLQFK	YPIHWHLLGDLQFK	4	YPIHWHLLGDLQFK4	6313.08	10113.3	9140.28
Q80VJ4	Q80VJ4	GPCP1_RAT	Gpcpd1	Glycerophosphocholine phosphodiesterase GPCPD1	1	YPILFLTQGK	YPILFLTQGK	2	YPILFLTQGK2	41933.7	51691.9	55545
Q01986	Q01986;P36506	MP2K1_RAT	Map2k1	Dual specificity mitogen-activated protein kinase kinase 1	0	YPIPPPDAK	YPIPPPDAK	2	YPIPPPDAK2	34677.8	31810.2	30338.1
P55068	P55068	PGCB_RAT	Bcan	Brevican core protein	1	YPIQNPR	YPIQNPR	2	YPIQNPR2	3353.98	9654.36	8530.73
D3ZZL3	D3ZZL3	D3ZZL3_RAT	Naglu	N-acetyl-alpha-glucosaminidase	1	YPIQPQGDTVDLSK	YPIQPQGDTVDLSK	2	YPIQPQGDTVDLSK2	15770.2		15685.2
P60570	P60570	PANX1_RAT	Panx1	Pannexin-1	1	YPIVEQYLK	YPIVEQYLK	2	YPIVEQYLK2	167394	143234	160808
P07897	P07897;D3Z9H2	PGCA_RAT	Acan	Aggrecan core protein	0	YPIVNPR	YPIVNPR	2	YPIVNPR2	363069	361349	313258
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	YPIVSPR	YPIVSPR	2	YPIVSPR2	90411.6	105333	106023
Q62867	Q62867	GGH_RAT	Ggh	Gamma-glutamyl hydrolase	1	YPIYAVQWHPEK	YPIYAVQWHPEK	3	YPIYAVQWHPEK3	4259.47	4716.29	7701.25
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	YPLALFNDQTLK	YPLALFNDQTLK	2	YPLALFNDQTLK2	840248	475867	584439
Q6P734	Q6P734	IC1_RAT	Serping1	Plasma protease C1 inhibitor	1	YPLALFNDQTLK	YPLALFNDQTLK	3	YPLALFNDQTLK3	6623.18	2696.1	2659.4
Q5I0G4	Q5I0G4	GARS_RAT	Gars1	Glycine--tRNA ligase	1	YPLFEGQETGK	YPLFEGQETGK	2	YPLFEGQETGK2	18945.1	14112.8	25940.7
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	YPLIIDPSGQATEFIMNEYK	YPLIIDPSGQATEFIMNEYK	3	YPLIIDPSGQATEFIMNEYK3	35489.7	53558.2	33207.3
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	YPLIIDPSGQATEFIMNEYKDR	YPLIIDPSGQATEFIMNEYKDR	3	YPLIIDPSGQATEFIMNEYKDR3	40069.3	40220.2	34496.1
Q5M7T7	Q5M7T7	Q5M7T7_RAT	Pla2g7	Phospholipase A2 group VII	1	YPLIIFSHGLGAFR	YPLIIFSHGLGAFR	3	YPLIIFSHGLGAFR3	24857.5	21646	16267.2
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	YPLLLDNIAK	YPLLLDNIAK	2	YPLLLDNIAK2	66615.4	83954.8	72601.6
A0A8I5ZKS6	A0A8I5ZKS6	A0A8I5ZKS6_RAT	Arhgap45	Rho GTPase activating protein 45	1	YPLLNTVETLTAAGTLIAK	YPLLNTVETLTAAGTLIAK	3	YPLLNTVETLTAAGTLIAK3	131449	153001	158054
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	YPLNCADPTSER	YPLNC(UniMod:4)ADPTSER	2	YPLNC(UniMod:4)ADPTSER2	187228	188897	207845
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	YPLNCSDPTSER	YPLNC(UniMod:4)SDPTSER	2	YPLNC(UniMod:4)SDPTSER2	12940.1	11167.4	19066.9
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	YPLRNLQPGSEYTVTLMAVKGNQQSPK	YPLRNLQPGSEYTVTLMAVKGNQQSPK	4	YPLRNLQPGSEYTVTLMAVKGNQQSPK4	27231.8	27841.8	32336.7
Q9EQV9	Q9EQV9	CBPB2_RAT	Cpb2	Carboxypeptidase B2	1	YPLYVLK	YPLYVLK	2	YPLYVLK2	61693.9	60738.9	52399
P39032	D4A1Q0;P39032;M0RCN1;D3ZZ95	RL36_RAT	Rpl36	Large ribosomal subunit protein eL36	0	YPMAVGLNK	YPMAVGLNK	2	YPMAVGLNK2	36766.2	50818.2	51750.5
P85515	P85515	ACTZ_RAT	Actr1a	Alpha-centractin	1	YPMEHGIVK	YPMEHGIVK	2	YPMEHGIVK2	120414	127171	130201
Q5XI78	Q5XI78	ODO1_RAT	Ogdh	2-oxoglutarate dehydrogenase complex component E1	1	YPNAELAWCQEEHK	YPNAELAWC(UniMod:4)QEEHK	3	YPNAELAWC(UniMod:4)QEEHK3	8297.61		
P50123	P50123	AMPE_RAT	Enpep	Glutamyl aminopeptidase	1	YPNAGAGAK	YPNAGAGAK	2	YPNAGAGAK2	45936.7	46859	41320.5
D3ZBP4	D3ZBP4	MICA1_RAT	Mical1	[F-actin]-monooxygenase MICAL1	1	YPNLNLR	YPNLNLR	2	YPNLNLR2	28149.3	38028.2	26212.1
E9PU28	E9PU28	IMDH2_RAT	Impdh2	Inosine-5'-monophosphate dehydrogenase 2	1	YPNLQVIGGNVVTAAQAK	YPNLQVIGGNVVTAAQAK	2	YPNLQVIGGNVVTAAQAK2	1211.33	1439.17	
Q5U2U2	Q5U2U2	CRKL_RAT	Crkl	Crk-like protein	1	YPNPPMGSVSAPNLSTAEENLEYVR	YPNPPMGSVSAPNLSTAEENLEYVR	3	YPNPPMGSVSAPNLSTAEENLEYVR3	7160.88		
A0A8I6A502	A0A8I6A502	A0A8I6A502_RAT	Tns3	Tensin 3	1	YPPFSPPEPQLSIPASLHK	YPPFSPPEPQLSIPASLHK	3	YPPFSPPEPQLSIPASLHK3		9947.82	7398.98
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	YPPGVPPEK	YPPGVPPEK	2	YPPGVPPEK2	248311	206148	213041
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	YPPVTTFSGYLLYR	YPPVTTFSGYLLYR	2	YPPVTTFSGYLLYR2	230860	204611	235264
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	YPPVTTFSGYLLYR	YPPVTTFSGYLLYR	3	YPPVTTFSGYLLYR3	56240.3	42302.3	37062
A0A8I6AL00	A0A8I6AL00	A0A8I6AL00_RAT	Ndufs8	NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial	1	YPSGEER	YPSGEER	1	YPSGEER1	59558.4	67857.8	66246.4
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	YPSGSELPVVEDEEK	YPSGSELPVVEDEEK	2	YPSGSELPVVEDEEK2	7176.12	12817.7	14362.6
Q6Q0N1	Q6Q0N1	CNDP2_RAT	Cndp2	Cytosolic non-specific dipeptidase	1	YPSLSLHGIEGAFSGSGAK	YPSLSLHGIEGAFSGSGAK	3	YPSLSLHGIEGAFSGSGAK3	9413.15	11603.7	11398.8
A0A8J8YKQ8	A0A8J8YKQ8	A0A8J8YKQ8_RAT	C2	Complement C2	1	YPSPAWR	YPSPAWR	2	YPSPAWR2	33186.9	48685.9	22724.4
A0A8I6ABZ7	A0A8I6ABZ7	A0A8I6ABZ7_RAT	Dhx9	RNA helicase	1	YPSPFFVFGEK	YPSPFFVFGEK	2	YPSPFFVFGEK2		3519.5	
O08653	O08653	TEP1_RAT	Tep1	Telomerase protein component 1	1	YPSTLELFSR	YPSTLELFSR	2	YPSTLELFSR2	5612.33		5068.1
P49616	P49616	UPAR_RAT	Plaur	Urokinase plasminogen activator surface receptor	1	YPTEHCIEVVTLQSTER	YPTEHC(UniMod:4)IEVVTLQSTER	3	YPTEHC(UniMod:4)IEVVTLQSTER3	4299.78	7084.14	5597.94
P0C1S9	P0C1S9	DGLB_RAT	Daglb	Diacylglycerol lipase-beta	1	YPTLYPPGR	YPTLYPPGR	2	YPTLYPPGR2	39083.8	35377	37687.8
A0A8I6AE43	A0A8I6AE43	A0A8I6AE43_RAT	Erbin	Erbb2 interacting protein	1	YPTPYPDELK	YPTPYPDELK	2	YPTPYPDELK2	37238.5	24871.4	37524.6
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	YPTYPEAEK	YPTYPEAEK	2	YPTYPEAEK2	60696.7	64602	57117.7
D3ZXK7	D3ZXK7	RN123_RAT	Rnf123	E3 ubiquitin-protein ligase RNF123	1	YPVAGFRPLQDPPFADLVR	YPVAGFRPLQDPPFADLVR	3	YPVAGFRPLQDPPFADLVR3	3645.72	10885	5919.01
D3ZFF4	D3ZFF4	D3ZFF4_RAT	Lclat1	Lysocardiolipin acyltransferase 1	1	YPVDTLPTSK	YPVDTLPTSK	2	YPVDTLPTSK2	16051.6	20889.7	13531.2
G3V8G2	G3V8G2	G3V8G2_RAT	Psmd5	26S proteasome non-ATPase regulatory subunit 5	1	YPVFLEK	YPVFLEK	2	YPVFLEK2	52396.8	59233.2	57663
A0A8I5XWD7	A0A8I5XWD7	A0A8I5XWD7_RAT	Ppip5k2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	1	YPVILNAR	YPVILNAR	2	YPVILNAR2	24906.5	29562.1	27671.5
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	YPVLINR	YPVLINR	2	YPVLINR2	162989	220298	199467
P28480	P28480	TCPA_RAT	Tcp1	T-complex protein 1 subunit alpha	1	YPVNSVNILK	YPVNSVNILK	2	YPVNSVNILK2	217505	225344	202730
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	YPVPSEWVK	YPVPSEWVK	2	YPVPSEWVK2	87318.4	75208.5	90413
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	YPVTPELLER	YPVTPELLER	2	YPVTPELLER2	47225.1	43204.5	44632.7
D4A1D3	D4A1D3	D4A1D3_RAT	Sacs	Sacsin molecular chaperone	1	YPWVWTGK	YPWVWTGK	2	YPWVWTGK2	8828.31	5195.86	9612
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	YPYTGPDCSK	YPYTGPDC(UniMod:4)SK	2	YPYTGPDC(UniMod:4)SK2	2.60762e+06	2.64376e+06	2.86826e+06
P31399	P31399	ATP5H_RAT	Atp5pd	ATP synthase subunit d, mitochondrial	1	YPYWPHQPIENL	YPYWPHQPIENL	2	YPYWPHQPIENL2	45512.5	39622	46254.4
F1LR10	F1LR10	LIMA1_RAT	Lima1	LIM domain and actin-binding protein 1	1	YQAAVSK	YQAAVSK	2	YQAAVSK2	29754.1	26758.4	40010.1
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	YQAECSQFK	YQAEC(UniMod:4)SQFK	2	YQAEC(UniMod:4)SQFK2	5464.88	1513.98	
B1WBY7	B1WBY7	B1WBY7_RAT	Erlin1	Erlin	1	YQAIASNSK	YQAIASNSK	2	YQAIASNSK2	37502.2	36863.4	43352.4
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	YQAMVHCGSIR	YQAMVHC(UniMod:4)GSIR	2	YQAMVHC(UniMod:4)GSIR2	6910.21	11292.8	7192.84
D2XV59	D2XV59	GTPB1_RAT	Gtpbp1	GTP-binding protein 1	1	YQAMVHCGSIR	YQAMVHC(UniMod:4)GSIR	3	YQAMVHC(UniMod:4)GSIR3	164151	157203	165339
Q9Z2P6	Q9Z2P6	SNP29_RAT	Snap29	Synaptosomal-associated protein 29	1	YQASHPNLR	YQASHPNLR	2	YQASHPNLR2	12552.3	15117.9	10063.7
Q66H98	Q66H98	CAVN2_RAT	Cavin2	Caveolae-associated protein 2	1	YQASTSNTVSK	YQASTSNTVSK	2	YQASTSNTVSK2	3.57243e+06	3.50497e+06	3.91037e+06
A0A8I5ZQE9	A0A8I5ZQE9	A0A8I5ZQE9_RAT	Irf9	Interferon regulatory factor 9	1	YQATLHFWDR	YQATLHFWDR	3	YQATLHFWDR3	8302.1	10451.2	
P35427	P35427	RL13A_RAT	Rpl13a	Large ribosomal subunit protein uL13	1	YQAVTATLEEK	YQAVTATLEEK	2	YQAVTATLEEK2	34533	32757.4	31686.3
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	YQCACNPGYHPTHDR	YQC(UniMod:4)AC(UniMod:4)NPGYHPTHDR	3	YQC(UniMod:4)AC(UniMod:4)NPGYHPTHDR3	41215.3	43578.8	36782.2
G3V9M6	G3V9M6	G3V9M6_RAT	Fbn1	Fibrillin 1	1	YQCACNPGYHPTHDR	YQC(UniMod:4)AC(UniMod:4)NPGYHPTHDR	4	YQC(UniMod:4)AC(UniMod:4)NPGYHPTHDR4	90478	126993	77512.9
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	YQCLATNEMGSVEK	YQC(UniMod:4)LATNEMGSVEK	2	YQC(UniMod:4)LATNEMGSVEK2	1694.45	2512.58	2728.22
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	YQCTEGFVQR	YQC(UniMod:4)TEGFVQR	2	YQC(UniMod:4)TEGFVQR2	9141.53	14953	12483
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	YQCVAFSPAGQQAK	YQC(UniMod:4)VAFSPAGQQAK	2	YQC(UniMod:4)VAFSPAGQQAK2	15455.8	15368.7	12202.9
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	YQCVVLTETK	YQC(UniMod:4)VVLTETK	2	YQC(UniMod:4)VVLTETK2	38735	41678	47769.9
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	YQCYCYGR	YQC(UniMod:4)YC(UniMod:4)YGR	2	YQC(UniMod:4)YC(UniMod:4)YGR2	35417.6	59934.2	63526.4
A0A8I5Y868	A0A8I5Y868	A0A8I5Y868_RAT	Klc2	Kinesin light chain	1	YQDAETLYK	YQDAETLYK	2	YQDAETLYK2	10713.1	13134.3	8727.71
B5DFK6	B5DFK6	B5DFK6_RAT	Ap3d1	Adaptor related protein complex 3 subunit delta 1	1	YQDAPGVEHIPVVQIDLSVPLK	YQDAPGVEHIPVVQIDLSVPLK	3	YQDAPGVEHIPVVQIDLSVPLK3	7268.54	7183.08	6623.5
Q62696	Q62696	DLG1_RAT	Dlg1	Disks large homolog 1	1	YQDEEVLPSER	YQDEEVLPSER	2	YQDEEVLPSER2	16926.4	28126.6	24255.7
A0A0G2JUF2	A0A0G2JUF2	A0A0G2JUF2_RAT	Snx30	Sorting nexin family member 30	1	YQDFDWLR	YQDFDWLR	2	YQDFDWLR2	7606.29	10207.2	7235.95
F7EXP7	F7EXP7	F7EXP7_RAT	Snx7	Sorting nexin 7	1	YQDFLWLK	YQDFLWLK	2	YQDFLWLK2		4607.9	3939.53
B2RYM1	B2RYM1;G3V862	B2RYM1_RAT	Angptl6	Angiopoietin-like 6	0	YQDGVYWAEFR	YQDGVYWAEFR	2	YQDGVYWAEFR2	152871	150296	191028
B1H257	B1H257	B1H257_RAT	Borcs5	BLOC-1-related complex subunit 5	1	YQDHLHQCAEAVAFDQNALVK	YQDHLHQC(UniMod:4)AEAVAFDQNALVK	3	YQDHLHQC(UniMod:4)AEAVAFDQNALVK3	1277.83	5070.56	4749.82
B1H257	B1H257	B1H257_RAT	Borcs5	BLOC-1-related complex subunit 5	1	YQDHLHQCAEAVAFDQNALVK	YQDHLHQC(UniMod:4)AEAVAFDQNALVK	4	YQDHLHQC(UniMod:4)AEAVAFDQNALVK4	17688	10587.6	7295.82
A0A8I6AM38	A0A8I6AM38	A0A8I6AM38_RAT	Iqgap2	IQ motif containing GTPase activating protein 2	1	YQDILNEIAK	YQDILNEIAK	2	YQDILNEIAK2	93752.6	113182	122874
Q99MI5	Q99MI5;A0A8I6GI39	Q99MI5_RAT	Srm	Spermidine synthase	0	YQDILVFR	YQDILVFR	2	YQDILVFR2	24397.4	16555	26598.5
D4A0T0	D4A0T0	D4A0T0_RAT	Ndufb10	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10	1	YQDLGAYYSAR	YQDLGAYYSAR	2	YQDLGAYYSAR2	57043.8	52941.9	65200.2
M0R915	M0R915	M0R915_RAT	Naip6	NLR family, apoptosis inhibitory protein 6	1	YQDPLNISSGYWK	YQDPLNISSGYWK	2	YQDPLNISSGYWK2	27913.7	29131.9	27646.3
F1LQ09	F1LQ09	F1LQ09_RAT	Atl2	Atlastin GTPase 2	1	YQDQLEAEIEETYANFIK	YQDQLEAEIEETYANFIK	3	YQDQLEAEIEETYANFIK3	1901.11	4860.75	7687.07
P16638	P16638	ACLY_RAT	Acly	ATP-citrate synthase	1	YQDTPGVK	YQDTPGVK	2	YQDTPGVK2	33149.2	21433.9	25359.5
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	YQDVYVELNHIK	YQDVYVELNHIK	2	YQDVYVELNHIK2	8383.92	4806.94	5052.93
A0A0G2K1P8	A0A0G2K1P8	A0A0G2K1P8_RAT	Triobp	TRIO and F-actin binding protein	1	YQDVYVELNHIK	YQDVYVELNHIK	3	YQDVYVELNHIK3	35040.4	30369.6	38175.3
Q6QI44	Q6QI44	NAA25_RAT	Naa25	N-alpha-acetyltransferase 25, NatB auxiliary subunit	1	YQEALDVIR	YQEALDVIR	2	YQEALDVIR2	4421.4	7120.23	5939.56
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	YQEALHLGSQLLR	YQEALHLGSQLLR	2	YQEALHLGSQLLR2	5504.32	1268.56	
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	YQEALHLGSQLLR	YQEALHLGSQLLR	3	YQEALHLGSQLLR3	95789.3	74902.9	86343.9
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	YQEALPSVANSTGPHAASCFGAK	YQEALPSVANSTGPHAASC(UniMod:4)FGAK	3	YQEALPSVANSTGPHAASC(UniMod:4)FGAK3	29042.6	36788.2	38264
Q5XII8	Q5XII8	CA043_RAT		Protein C1orf43 homolog	1	YQEALSELATVVK	YQEALSELATVVK	2	YQEALSELATVVK2	5099.82	2320.24	3022.46
Q62902	Q62902	LMAN1_RAT	Lman1	Protein ERGIC-53	1	YQEEFEHFQQELDK	YQEEFEHFQQELDK	3	YQEEFEHFQQELDK3	37624.8	20748.9	26543.8
Q62902	Q62902	LMAN1_RAT	Lman1	Protein ERGIC-53	1	YQEEFEHFQQELDKK	YQEEFEHFQQELDKK	3	YQEEFEHFQQELDKK3	52671.8	34049.1	52745.7
Q62902	Q62902	LMAN1_RAT	Lman1	Protein ERGIC-53	1	YQEEFEHFQQELDKK	YQEEFEHFQQELDKK	4	YQEEFEHFQQELDKK4	15747.8	18131.1	19707.9
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	YQEELNFDNPLGMR	YQEELNFDNPLGMR	2	YQEELNFDNPLGMR2	42912.3	68621.9	63365.7
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	YQEESQVYLLGTGLR	YQEESQVYLLGTGLR	2	YQEESQVYLLGTGLR2	100838	102221	95045.4
A0A8J8YIH6	A0A8J8YIH6	A0A8J8YIH6_RAT	Lcp2	Lymphocyte cytosolic protein 2	1	YQEESQVYLLGTGLR	YQEESQVYLLGTGLR	3	YQEESQVYLLGTGLR3	82027.6	99452.9	87910.3
Q4V8C2	Q4V8C2	ZW10_RAT	Zw10	Centromere/kinetochore protein zw10 homolog	1	YQEEVPVYVSK	YQEEVPVYVSK	2	YQEEVPVYVSK2	13874.1	13425	17792.2
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	YQEHEDVPICIHCSAGCGR	YQEHEDVPIC(UniMod:4)IHC(UniMod:4)SAGC(UniMod:4)GR	3	YQEHEDVPIC(UniMod:4)IHC(UniMod:4)SAGC(UniMod:4)GR3	12178.9	12336.7	17397.7
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	YQEHEDVPICIHCSAGCGR	YQEHEDVPIC(UniMod:4)IHC(UniMod:4)SAGC(UniMod:4)GR	4	YQEHEDVPIC(UniMod:4)IHC(UniMod:4)SAGC(UniMod:4)GR4	100003	158278	140848
A0A8I6A6I4	A0A8I6A6I4	A0A8I6A6I4_RAT	Atp11b	Phospholipid-transporting ATPase	1	YQEINGK	YQEINGK	2	YQEINGK2	149045	85829.9	
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	YQELAVALDSSYVTNK	YQELAVALDSSYVTNK	2	YQELAVALDSSYVTNK2	10645.1	7711.95	8379.95
Q62839	Q62839	GOGA2_RAT	Golga2	Golgin subfamily A member 2	1	YQELAVALDSSYVTNK	YQELAVALDSSYVTNK	3	YQELAVALDSSYVTNK3	39381.7	45156.8	
G3V7Q7	G3V7Q7	G3V7Q7_RAT	Iqgap1	IQ motif containing GTPase activating protein 1	1	YQELINDIAK	YQELINDIAK	2	YQELINDIAK2	82208.4	77171.4	70809.3
Q5M9G3	Q5M9G3	CAPR1_RAT	Caprin1	Caprin-1	1	YQEVTNNLEFAK	YQEVTNNLEFAK	2	YQEVTNNLEFAK2	62619.8	52624.9	64077.2
D4A563	D4A563	D4A563_RAT	Peak1	Pseudopodium-enriched atypical kinase 1	1	YQEVWTSSTSPR	YQEVWTSSTSPR	2	YQEVWTSSTSPR2	10021.1	8512.72	15517.5
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	YQFDPNLGIR	YQFDPNLGIR	2	YQFDPNLGIR2	15090.9	10160.9	15527.6
Q642B4	Q642B4	Q642B4_RAT	Clec14a	C-type lectin domain containing 14A	1	YQFEALCPAPR	YQFEALC(UniMod:4)PAPR	2	YQFEALC(UniMod:4)PAPR2	27110.7	22149.6	28376.5
Q5M9F6	Q5M9F6	Q5M9F6_RAT	Mthfs	5-formyltetrahydrofolate cyclo-ligase	1	YQFHSNHMDMVR	YQFHSNHMDMVR	3	YQFHSNHMDMVR3		3206.79	8325.87
Q62885	A0A0G2K351;Q62885	U119A_RAT	Unc119	Protein unc-119 homolog A	0	YQFTPAFLR	YQFTPAFLR	2	YQFTPAFLR2	19780.8	18106.2	21572.7
Q5U2N3	Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	1	YQGAVATVIAR	YQGAVATVIAR	2	YQGAVATVIAR2	8978.59	3572.69	10105.5
A0A8I5ZQ33;Q4VBH2	A0A8I5ZQ33;Q4VBH2	A0A8I5ZQ33_RAT;Q4VBH2_RAT	LOC100911093;Trnt1	CCA tRNA nucleotidyltransferase 1, mitochondrial-like	0	YQGEHALLK	YQGEHALLK	2	YQGEHALLK2	1828.17		
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	YQGGFLISR	YQGGFLISR	2	YQGGFLISR2	39132.2	38093.2	44894.6
A0A8I5ZV67	A0A8I5ZV67	A0A8I5ZV67_RAT	Eea1	Early endosome antigen 1	1	YQGLQQQEAK	YQGLQQQEAK	2	YQGLQQQEAK2	19563.7	21430.7	19890.3
B2GV24	B2GV24;A0A8I5ZXB9	UFL1_RAT	Ufl1	E3 UFM1-protein ligase 1	0	YQGLVVK	YQGLVVK	2	YQGLVVK2	63422.4	80924.9	72899.7
Q99J86	Q99J86	ATRN_RAT	Atrn	Attractin	1	YQGNPLK	YQGNPLK	2	YQGNPLK2	13000.2	18197.7	32879.6
Q9EPH8	Q9EPH8;D3ZAS7	PABP1_RAT	Pabpc1	Polyadenylate-binding protein 1	0	YQGVNLYVK	YQGVNLYVK	2	YQGVNLYVK2	73298.8	55691	68154.5
Q769K2	Q769K2	NAPEP_RAT	Napepld	N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D	1	YQHADPEDAVR	YQHADPEDAVR	2	YQHADPEDAVR2	8195.17	10398.7	
Q769K2	Q769K2	NAPEP_RAT	Napepld	N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D	1	YQHADPEDAVR	YQHADPEDAVR	3	YQHADPEDAVR3	19862.4	26636.7	24361
D4ABD7	D4ABD7	D4ABD7_RAT	Trip11	Thyroid hormone receptor interactor 11	1	YQHEQMSITHSR	YQHEQMSITHSR	3	YQHEQMSITHSR3	4350.92	2579	
D3ZKE1	D3ZKE1	D3ZKE1_RAT	Uvrag	UV radiation resistance associated	1	YQHGLGTPDLR	YQHGLGTPDLR	2	YQHGLGTPDLR2	3664.34	6416.55	4772.42
D3ZKE1	D3ZKE1	D3ZKE1_RAT	Uvrag	UV radiation resistance associated	1	YQHGLGTPDLR	YQHGLGTPDLR	3	YQHGLGTPDLR3	20527.7	26200.1	24697.8
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	YQHLITNSFVECNR	YQHLITNSFVEC(UniMod:4)NR	2	YQHLITNSFVEC(UniMod:4)NR2	8164.65	10952.5	10543.1
D3ZXL1	D3ZXL1	D3ZXL1_RAT	Arih1	RBR-type E3 ubiquitin transferase	1	YQHLITNSFVECNR	YQHLITNSFVEC(UniMod:4)NR	3	YQHLITNSFVEC(UniMod:4)NR3	67666.7	59353.4	57405.7
A0A0G2K2Z2	A0A0G2K2Z2	A0A0G2K2Z2_RAT	Inpp5k	Inositol polyphosphate-5-phosphatase K	1	YQHLPYIQIISTK	YQHLPYIQIISTK	2	YQHLPYIQIISTK2	6057.27	5030.77	12257.5
A0A0G2K2Z2	A0A0G2K2Z2	A0A0G2K2Z2_RAT	Inpp5k	Inositol polyphosphate-5-phosphatase K	1	YQHLPYIQIISTK	YQHLPYIQIISTK	3	YQHLPYIQIISTK3	32060.5	37376.8	32311.4
Q63358	Q63358	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	1	YQHPDTER	YQHPDTER	2	YQHPDTER2			15671.4
B0BNC9	B0BNC9	QORL2_RAT		Quinone oxidoreductase-like protein 2	1	YQHQDFAVFSK	YQHQDFAVFSK	3	YQHQDFAVFSK3	4903.73		9258.95
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	YQIEAGNELDLFGLNPSSGVLSLK	YQIEAGNELDLFGLNPSSGVLSLK	3	YQIEAGNELDLFGLNPSSGVLSLK3			5902.73
P42346	P42346	MTOR_RAT	Mtor	Serine/threonine-protein kinase mTOR	1	YQIFIPMVNK	YQIFIPMVNK	2	YQIFIPMVNK2	14805	18776.2	14058.4
Q63347	Q63347	PRS7_RAT	Psmc2	26S proteasome regulatory subunit 7	1	YQIHIPLPPK	YQIHIPLPPK	3	YQIHIPLPPK3	58432.2	42693.9	50486.6
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	YQILNNEVFAILNK	YQILNNEVFAILNK	2	YQILNNEVFAILNK2	11404.2	16572.9	10498
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	YQLCVQR	YQLC(UniMod:4)VQR	2	YQLC(UniMod:4)VQR2	12035.2	9478.45	9733.62
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	YQLDKDGVVLFK	YQLDKDGVVLFK	2	YQLDKDGVVLFK2	102284	122461	104424
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	YQLDKDGVVLFK	YQLDKDGVVLFK	3	YQLDKDGVVLFK3	2.15181e+06	2.49935e+06	2.32545e+06
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	YQLDKDGVVLFKK	YQLDKDGVVLFKK	3	YQLDKDGVVLFKK3	14844.3	39805.4	34882.5
P04785	P04785	PDIA1_RAT	P4hb	Protein disulfide-isomerase	1	YQLDKDGVVLFKK	YQLDKDGVVLFKK	4	YQLDKDGVVLFKK4	23529.7	43844.3	37355.8
P81155	A0A8I5ZYN2;P81155	VDAC2_RAT	Vdac2	Voltage-dependent anion-selective channel protein 2	0	YQLDPTASISAK	YQLDPTASISAK	2	YQLDPTASISAK2	1.13773e+06	988877	1.14444e+06
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	YQLFAFISHMGTSTMCGHYVCHIK	YQLFAFISHMGTSTMC(UniMod:4)GHYVC(UniMod:4)HIK	4	YQLFAFISHMGTSTMC(UniMod:4)GHYVC(UniMod:4)HIK4	7450.69	16705.8	9772.87
Q5FVQ9	Q5FVQ9	TBCE_RAT	Tbce	Tubulin-specific chaperone E	1	YQLLCCK	YQLLC(UniMod:4)C(UniMod:4)K	2	YQLLC(UniMod:4)C(UniMod:4)K2	12544.1		5358.88
D3ZD89	D3ZD89;M0RC73	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	0	YQLLQLR	YQLLQLR	2	YQLLQLR2	12793.1	17870.7	10713.7
D3ZD89	D3ZD89	D3ZD89_RAT	Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1	YQLLQLRPAQR	YQLLQLRPAQR	3	YQLLQLRPAQR3	115259	136388	104753
P29994	P29994;P29995	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	0	YQLNLFAR	YQLNLFAR	2	YQLNLFAR2	58723.7	50099.6	48356.2
B0BNM1	B0BNM1	NNRE_RAT	Naxe	NAD(P)H-hydrate epimerase	1	YQLNLPAYPDTECVYR	YQLNLPAYPDTEC(UniMod:4)VYR	3	YQLNLPAYPDTEC(UniMod:4)VYR3	10688.5	11484	16364.8
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	YQLQSQEETK	YQLQSQEETK	2	YQLQSQEETK2	10061.5	7817.48	15762.2
D4A5I4	D4A5I4	D4A5I4_RAT	Nav1	Neuron navigator 1	1	YQLQSQEETKER	YQLQSQEETKER	3	YQLQSQEETKER3	13013.9	15071.5	10130.7
P06685	P06685	AT1A1_RAT	Atp1a1	Sodium/potassium-transporting ATPase subunit alpha-1	1	YQLSIHK	YQLSIHK	2	YQLSIHK2	80998	76954.3	69738.9
P0C2X9	P0C2X9	AL4A1_RAT	Aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1	YQLSPFNHGHK	YQLSPFNHGHK	2	YQLSPFNHGHK2	6361.36	6557.04	8112.22
P0C2X9	P0C2X9	AL4A1_RAT	Aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1	YQLSPFNHGHK	YQLSPFNHGHK	3	YQLSPFNHGHK3	53893.2	47313.5	53083.5
O08700	O08700	VPS45_RAT	Vps45	Vacuolar protein sorting-associated protein 45	1	YQLSSEAAK	YQLSSEAAK	2	YQLSSEAAK2	68014.5	56988	55061.2
Q5ZQU0	Q5ZQU0	SNED1_RAT	Sned1	Sushi, nidogen and EGF-like domain-containing protein 1	1	YQLSVTAVQSTEQGQLHSEPAHLYIITSPR	YQLSVTAVQSTEQGQLHSEPAHLYIITSPR	4	YQLSVTAVQSTEQGQLHSEPAHLYIITSPR4	11409	9283.52	7624.96
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	YQLYHWLEK	YQLYHWLEK	3	YQLYHWLEK3	2592.83	3579.61	3893.88
P30121	P30121	TIMP2_RAT	Timp2	Metalloproteinase inhibitor 2	1	YQMGCECK	YQMGC(UniMod:4)EC(UniMod:4)K	2	YQMGC(UniMod:4)EC(UniMod:4)K2	21183.8	18512.9	20328.4
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	YQMGDQNVYPGPIDNSGLLK	YQMGDQNVYPGPIDNSGLLK	3	YQMGDQNVYPGPIDNSGLLK3	90561.3	99639.9	100447
Q66H91	Q66H91	GIT2_RAT	Git2	ARF GTPase-activating protein GIT2	1	YQMLAFVHR	YQMLAFVHR	2	YQMLAFVHR2	5880.91	6400.91	
Q66H91	Q66H91	GIT2_RAT	Git2	ARF GTPase-activating protein GIT2	1	YQMLAFVHR	YQMLAFVHR	3	YQMLAFVHR3	7110.83	6632.44	12931
Q10743	Q10743	ADA10_RAT	Adam10	Disintegrin and metalloproteinase domain-containing protein 10	1	YQMTGVEEGTR	YQMTGVEEGTR	2	YQMTGVEEGTR2	32026.1	39992.3	26049.3
Q02356	Q02356	AMPD2_RAT	Ampd2	AMP deaminase 2	1	YQNAELR	YQNAELR	2	YQNAELR2	273391	337312	275043
Q4KLH3	Q4KLH3	OGRL1_RAT	Ogfrl1	Opioid growth factor receptor-like protein 1	1	YQNDLSNLR	YQNDLSNLR	2	YQNDLSNLR2	27826.5	34624.4	17750.9
E9PU03	E9PU03	E9PU03_RAT	Smg5	Nonsense-mediated mRNA decay factor	1	YQNELAGVDTELLAER	YQNELAGVDTELLAER	2	YQNELAGVDTELLAER2		5019.67	835.123
P18292	P18292	THRB_RAT	F2	Prothrombin	1	YQNFDPEVK	YQNFDPEVK	2	YQNFDPEVK2	93232.2	106569	116467
P18292	P18292	THRB_RAT	F2	Prothrombin	1	YQNFDPEVK	YQNFDPEVK	3	YQNFDPEVK3	21785	21729	20443.6
P18292	P18292	THRB_RAT	F2	Prothrombin	1	YQNFDPEVKLVQNFCR	YQNFDPEVKLVQNFC(UniMod:4)R	3	YQNFDPEVKLVQNFC(UniMod:4)R3	65882.3	54346.5	44151.4
P0C2C4	P0C2C4	RM10_RAT	Mrpl10	Large ribosomal subunit protein uL10m	1	YQNLLPLFVGHNLLLVSEEPK	YQNLLPLFVGHNLLLVSEEPK	3	YQNLLPLFVGHNLLLVSEEPK3	7521.71	5127.35	4168.08
P70618	P70618	MK14_RAT	Mapk14	Mitogen-activated protein kinase 14	1	YQNLSPVGSGAYGSVCAAFDTK	YQNLSPVGSGAYGSVC(UniMod:4)AAFDTK	3	YQNLSPVGSGAYGSVC(UniMod:4)AAFDTK3	36912.4	20542.2	19883.4
P98193	P98193	DMP1_RAT	Dmp1	Dentin matrix acidic phosphoprotein 1	1	YQNTESESSEER	YQNTESESSEER	2	YQNTESESSEER2			3881.04
Q9JJ05	Q9JJ05	C1GLT_RAT	C1galt1	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1	1	YQPALPENILK	YQPALPENILK	2	YQPALPENILK2	70402.3	62575.2	55052.3
Q07803	Q07803	EFGM_RAT	Gfm1	Elongation factor G, mitochondrial	1	YQPCSPSTQEELVNK	YQPC(UniMod:4)SPSTQEELVNK	2	YQPC(UniMod:4)SPSTQEELVNK2	6904.73	14309.9	7067.06
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	YQPFKPLSIGGIIILK	YQPFKPLSIGGIIILK	2	YQPFKPLSIGGIIILK2	16899.2	8474.14	9864.29
O88761	O88761	PSMD1_RAT	Psmd1	26S proteasome non-ATPase regulatory subunit 1	1	YQPFKPLSIGGIIILK	YQPFKPLSIGGIIILK	3	YQPFKPLSIGGIIILK3	127883	88292.6	75322.7
A0A8I5ZU41	A0A8I5YBI0;A0A8I6AIH1;P00689;A0A8I5ZU41	A0A8I5ZU41_RAT	Amy1	Alpha-amylase	0	YQPISYK	YQPISYK	2	YQPISYK2	27169.8	21236.2	23046.3
D4AB66	D4AB66	STON2_RAT	Ston2	Stonin-2	1	YQPKPAVAHAAER	YQPKPAVAHAAER	3	YQPKPAVAHAAER3	18566.2	14385.7	
Q63270	Q63270	ACOHC_RAT	Aco1	Cytoplasmic aconitate hydratase	1	YQQAGLPLIVLAGK	YQQAGLPLIVLAGK	2	YQQAGLPLIVLAGK2	13865	12616.5	20064.4
Q63787	Q63788;Q63787	P85A_RAT	Pik3r1	Phosphatidylinositol 3-kinase regulatory subunit alpha	0	YQQDQVVK	YQQDQVVK	2	YQQDQVVK2	9219.7	10074.7	9694.8
Q0ZHH6	Q0ZHH6	ATLA3_RAT	Atl3	Atlastin-3	1	YQQELEEEITELYENFCK	YQQELEEEITELYENFC(UniMod:4)K	3	YQQELEEEITELYENFC(UniMod:4)K3	18507.3	14436.5	19204.1
Q2PQA9	P56536;Q2PQA9;Q6QLM7	KINH_RAT	Kif5b	Kinesin-1 heavy chain	0	YQQEVDR	YQQEVDR	2	YQQEVDR2	73411.2		47526.8
P67874	P67874	CSK2B_RAT	Csnk2b	Casein kinase II subunit beta	1	YQQGDFGYCPR	YQQGDFGYC(UniMod:4)PR	2	YQQGDFGYC(UniMod:4)PR2	120017	132491	147079
P06882	P06882	THYG_RAT	Tg	Thyroglobulin	1	YQQLSESR	YQQLSESR	2	YQQLSESR2	37000.4	41735.2	36026.4
Q9WTN5	Q9WTN5	TPC1_RAT	Tpcn1	Two pore calcium channel protein 1	1	YQQNSMVFLGR	YQQNSMVFLGR	2	YQQNSMVFLGR2	9894.62	10944.9	11878.7
A0A8I6AE36	A0A8I6AE36;Q9QYU1	A0A8I6AE36_RAT	ENSRNOG00000067472	Peroxisomal biogenesis factor 19	0	YQQQHSVMGK	YQQQHSVMGK	2	YQQQHSVMGK2	4344.25		3831.72
A0A8I6GJC3	A0A8I6GJC3	A0A8I6GJC3_RAT	Larp1	La ribonucleoprotein 1, translational regulator	1	YQQVPTDALANK	YQQVPTDALANK	2	YQQVPTDALANK2	15385.2	19964.8	17184.3
P98106	P98106	LYAM3_RAT	Selp	P-selectin	1	YQSACSFSCDEGSLLVGASVIR	YQSAC(UniMod:4)SFSC(UniMod:4)DEGSLLVGASVIR	3	YQSAC(UniMod:4)SFSC(UniMod:4)DEGSLLVGASVIR3	229513	212260	224700
A0A0G2KB61	A0A0G2KB61	A0A0G2KB61_RAT	Ppp1r13b	Protein phosphatase 1, regulatory subunit 13B	1	YQSDADLEALR	YQSDADLEALR	2	YQSDADLEALR2	8926.08	6096.89	15105
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	YQSHDYAFSSVEK	YQSHDYAFSSVEK	2	YQSHDYAFSSVEK2	8805.12	7114.48	5331.32
Q99ML5	Q99ML5	PCYOX_RAT	Pcyox1	Prenylcysteine oxidase 1	1	YQSHDYAFSSVEK	YQSHDYAFSSVEK	3	YQSHDYAFSSVEK3	89691.9	86857.5	69894.4
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	YQSLGIK	YQSLGIK	2	YQSLGIK2	35303.9	36106.7	42993.6
Q9JJ22	Q9JJ22	ERAP1_RAT	Erap1	Endoplasmic reticulum aminopeptidase 1	1	YQSSLSSTEK	YQSSLSSTEK	2	YQSSLSSTEK2	24618.6	24250	33990.3
A0A8I5ZY21	A0A8I5ZY21	A0A8I5ZY21_RAT	Nomo1	Nodal modulator 1	1	YQTDCAPNNGYFMIPLYDK	YQTDC(UniMod:4)APNNGYFMIPLYDK	3	YQTDC(UniMod:4)APNNGYFMIPLYDK3	9746.74	6195.17	9004.86
Q5XIE8	Q5XIE8	ITM2B_RAT	Itm2b	Integral membrane protein 2B	1	YQTIEENIK	YQTIEENIK	2	YQTIEENIK2	144472	139526	125675
A0A8I6AQL1	A0A8I6AQL1	A0A8I6AQL1_RAT	Itgb5	Integrin beta	1	YQTNPCIGYK	YQTNPC(UniMod:4)IGYK	2	YQTNPC(UniMod:4)IGYK2		1234.26	
A0A8I6GFU3	A0A8I6GFU3	A0A8I6GFU3_RAT	Svil	Supervillin	1	YQTQPVTLGEVEQVQSGK	YQTQPVTLGEVEQVQSGK	3	YQTQPVTLGEVEQVQSGK3		4379.75	2531.35
Q02769	Q02769	FDFT_RAT	Fdft1	Squalene synthase	1	YQTVIADICHR	YQTVIADIC(UniMod:4)HR	3	YQTVIADIC(UniMod:4)HR3	3897.94	3414.36	4140.73
Q9Z2L0	Q9Z2L0	VDAC1_RAT	Vdac1	Voltage-dependent anion-selective channel protein 1	1	YQVDPDACFSAK	YQVDPDAC(UniMod:4)FSAK	2	YQVDPDAC(UniMod:4)FSAK2	1.19371e+06	1.13374e+06	1.33987e+06
B0BN86	B0BN86	TMM11_RAT	Tmem11	Transmembrane protein 11, mitochondrial	1	YQVEYDAYK	YQVEYDAYK	2	YQVEYDAYK2	25444.5	23339.9	16665.1
A0A8I6A371	A0A8I6A371	A0A8I6A371_RAT	Nmi	N-myc (and STAT) interactor	1	YQVFSAVSK	YQVFSAVSK	2	YQVFSAVSK2	52210.2	48868.8	50146.1
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	YQVGVHYELTEEEK	YQVGVHYELTEEEK	3	YQVGVHYELTEEEK3	25305.5	28026.3	21165.7
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	YQVIEGIISPVNDSYGK	YQVIEGIISPVNDSYGK	2	YQVIEGIISPVNDSYGK2	147060	130739	136978
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	YQVIEGIISPVNDSYGK	YQVIEGIISPVNDSYGK	3	YQVIEGIISPVNDSYGK3	16016.1	21242.8	20935.7
F7F588	F7F588	F7F588_RAT	Nmnat3	Nicotinamide-nucleotide adenylyltransferase	1	YQVIEGIISPVNDSYGKK	YQVIEGIISPVNDSYGKK	3	YQVIEGIISPVNDSYGKK3	7741.32	10613	4488.21
Q63921	Q63921	PGH1_RAT	Ptgs1	Prostaglandin G/H synthase 1	1	YQVLDGEVYPPSVEQASVLMR	YQVLDGEVYPPSVEQASVLMR	3	YQVLDGEVYPPSVEQASVLMR3	549910	538737	586049
A0A8I6AA94	A0A8I6AA94	A0A8I6AA94_RAT	Ano6	Anoctamin	1	YQVMNNVNK	YQVMNNVNK	2	YQVMNNVNK2	358390	398462	414482
D4ABN8	D4ABN8	D4ABN8_RAT	Xrn1	5'-3' exoribonuclease 1	1	YQVNQNGEVR	YQVNQNGEVR	2	YQVNQNGEVR2	23118.3	17861.5	11685.1
D3ZYR1	D3ZYR1	FCHO2_RAT	Fcho2	F-BAR domain only protein 2	1	YQVSSNGIQSTPLNLATYWK	YQVSSNGIQSTPLNLATYWK	3	YQVSSNGIQSTPLNLATYWK3		4939.78	6772.91
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	YQVSVNK	YQVSVNK	1	YQVSVNK1	891372	950088	918400
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	YQVSVNK	YQVSVNK	2	YQVSVNK2	4.53982e+07	4.32581e+07	4.55717e+07
Q07984	Q07984	SSRD_RAT	Ssr4	Translocon-associated protein subunit delta	1	YQVSWSLEHK	YQVSWSLEHK	2	YQVSWSLEHK2	43027.5	46436.1	47871.5
Q07984	Q07984	SSRD_RAT	Ssr4	Translocon-associated protein subunit delta	1	YQVSWSLEHK	YQVSWSLEHK	3	YQVSWSLEHK3	52995.4	47036.4	49591.2
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	YQWHVEDLVPWIK	YQWHVEDLVPWIK	2	YQWHVEDLVPWIK2	14815.9	2579.03	8409.13
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	YQWHVEDLVPWIK	YQWHVEDLVPWIK	3	YQWHVEDLVPWIK3	16126.1	24902	23053.6
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	YQWNIMK	YQWNIMK	2	YQWNIMK2	42826.7	34867.1	27844
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	YQYAELGK	YQYAELGK	1	YQYAELGK1	1726.69	1956.7	2759.97
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	YQYAELGK	YQYAELGK	2	YQYAELGK2	107042	69344	78455.9
A0A8I5Y661	A0A8I5Y661	A0A8I5Y661_RAT	Fam177a1	Family with sequence similarity 177, member A1	1	YQYAIDEYYR	YQYAIDEYYR	2	YQYAIDEYYR2	53589	43925.8	59500.2
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	YQYCALK	YQYC(UniMod:4)ALK	2	YQYC(UniMod:4)ALK2	29878.4	32920.3	26811.6
P62142	P62142	PP1B_RAT	Ppp1cb	Serine/threonine-protein phosphatase PP1-beta catalytic subunit	1	YQYGGLNSGR	YQYGGLNSGR	2	YQYGGLNSGR2	48872	41674.6	50997.1
P62142	P62142	PP1B_RAT	Ppp1cb	Serine/threonine-protein phosphatase PP1-beta catalytic subunit	1	YQYGGLNSGRPVTPPR	YQYGGLNSGRPVTPPR	3	YQYGGLNSGRPVTPPR3	397674	401511	406600
P48032	P48032	TIMP3_RAT	Timp3	Metalloproteinase inhibitor 3	1	YQYLLTGR	YQYLLTGR	2	YQYLLTGR2	2.68982e+06	2.67467e+06	3.00448e+06
Q6AYA5	Q6AYA5	T106B_RAT	Tmem106b	Transmembrane protein 106B	1	YQYVDCGR	YQYVDC(UniMod:4)GR	2	YQYVDC(UniMod:4)GR2	38901.2	42983.2	31812.9
O55171	O55171	ACOT2_RAT	Acot2	Acyl-coenzyme A thioesterase 2, mitochondrial	1	YRADAGGELDLAR	YRADAGGELDLAR	3	YRADAGGELDLAR3			6424.03
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	YRCELLYEGPPDDEAAMGIK	YRC(UniMod:4)ELLYEGPPDDEAAMGIK	3	YRC(UniMod:4)ELLYEGPPDDEAAMGIK3	13260.4	25956.2	25514
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	YRDGAESVLTVK	YRDGAESVLTVK	2	YRDGAESVLTVK2	25920.5	31639.8	23619.8
Q9WVT0	Q9WVT0	AGRF5_RAT	Adgrf5	Adhesion G protein-coupled receptor F5	1	YRDGAESVLTVK	YRDGAESVLTVK	3	YRDGAESVLTVK3	691158	754666	773442
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	YRDHVTATQLIQK	YRDHVTATQLIQK	3	YRDHVTATQLIQK3	22327.6	28511	27447.7
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	YRDHVTATQLIQK	YRDHVTATQLIQK	4	YRDHVTATQLIQK4	5740.51	10512	17803.6
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	YRDILEPQDER	YRDILEPQDER	3	YRDILEPQDER3	6109.06	12476	8008.37
P70567	P70567	TMOD1_RAT	Tmod1	Tropomodulin-1	1	YRDLDEDEILGALTEEELR	YRDLDEDEILGALTEEELR	3	YRDLDEDEILGALTEEELR3	1782.57	1059.82	2746.68
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	YRDLIEAADTIGQMR	YRDLIEAADTIGQMR	3	YRDLIEAADTIGQMR3	19707.7	26938.6	18644.4
P36876	P36876	2ABA_RAT	Ppp2r2a	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	1	YRDPTTVTTLR	YRDPTTVTTLR	3	YRDPTTVTTLR3	43189.3	66215.2	33282.5
A0A0G2K261	A0A0G2K261	A0A0G2K261_RAT	Iars2	isoleucine--tRNA ligase	1	YRDTVLLPQTNFPMK	YRDTVLLPQTNFPMK	3	YRDTVLLPQTNFPMK3	27377	24593.3	19800.2
P20417	P20417	PTN1_RAT	Ptpn1	Tyrosine-protein phosphatase non-receptor type 1	1	YRDVSPFDHSR	YRDVSPFDHSR	3	YRDVSPFDHSR3	24080.2	31209.7	28937.2
P14272	P14272	KLKB1_RAT	Klkb1	Plasma kallikrein	1	YRDYVITK	YRDYVITK	2	YRDYVITK2	7053.16	8692.99	9914.84
Q8CG09	Q8CG09	MRP1_RAT	Abcc1	Multidrug resistance-associated protein 1	1	YREDLDLVLK	YREDLDLVLK	3	YREDLDLVLK3	27703.3	24864.3	27772
Q8K4V4	Q8K4V4	SNX27_RAT	Snx27	Sorting nexin-27	1	YREFAILHQNLK	YREFAILHQNLK	4	YREFAILHQNLK4	3622.96	2177.22	
Q71RP1	Q71RP1	HPSE_RAT	Hpse	Heparanase	1	YREGDLTLYVLNLHNVTK	YREGDLTLYVLNLHNVTK	4	YREGDLTLYVLNLHNVTK4	1398.94	1370.91	
D3ZE72	D3ZE72	D3ZE72_RAT	Metap1	Methionine aminopeptidase	1	YRELGNIIQK	YRELGNIIQK	3	YRELGNIIQK3	12483.4	12294.9	5070.21
D4A7L4	D4A7L4	D4A7L4_RAT	Ndufb11	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial	1	YRELNGLPIMESNYFDPSK	YRELNGLPIMESNYFDPSK	3	YRELNGLPIMESNYFDPSK3			2787.1
O35550	O35550	RABE1_RAT	Rabep1	Rab GTPase-binding effector protein 1	1	YRENIVHVR	YRENIVHVR	3	YRENIVHVR3	8369.52	10867.5	7437.39
Q9QYM0	Q9QYM0	MRP5_RAT	Abcc5	ATP-binding cassette sub-family C member 5	1	YRENLPLVLK	YRENLPLVLK	3	YRENLPLVLK3	5023.31	2752.01	5224.96
P0C2X9	P0C2X9	AL4A1_RAT	Aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1	YRETLQLVDSTTSYGLTGAVFAQDK	YRETLQLVDSTTSYGLTGAVFAQDK	3	YRETLQLVDSTTSYGLTGAVFAQDK3	8623.51	5533.37	6603.55
G3V912	G3V912	G3V912_RAT	Tmx4	Thioredoxin-related transmembrane protein 4	1	YRGPGIYEDLQNYILEK	YRGPGIYEDLQNYILEK	3	YRGPGIYEDLQNYILEK3	9241.2	13794.8	11765.2
A0A8I6A0W6	A0A8I6A0W6	A0A8I6A0W6_RAT	Ube2o	Ubiquitin-conjugating enzyme E2O	1	YRGSVHFGLVR	YRGSVHFGLVR	3	YRGSVHFGLVR3	7883.93	6608.9	10135.5
F1M7Z1	F1M7Z1	F1M7Z1_RAT	Edc3	Enhancer of mRNA-decapping protein 3	1	YRHDENILESEPIVYR	YRHDENILESEPIVYR	3	YRHDENILESEPIVYR3	6011.24	5495.26	4565.96
F1M7Z1	F1M7Z1	F1M7Z1_RAT	Edc3	Enhancer of mRNA-decapping protein 3	1	YRHDENILESEPIVYR	YRHDENILESEPIVYR	4	YRHDENILESEPIVYR4	19018.8	12705.1	21722.4
A0A8I6A8Q1	A0A8I6A8Q1	A0A8I6A8Q1_RAT	A2ml1	Alpha-2-macroglobulin-like 1	1	YRKPEVCSSQENQPLLR	YRKPEVC(UniMod:4)SSQENQPLLR	4	YRKPEVC(UniMod:4)SSQENQPLLR4	12743.2	18591.5	5468.5
A0A0G2JYQ1	A0A0G2JYQ1	A0A0G2JYQ1_RAT	Haus7	HAUS augmin-like complex, subunit 7	1	YRLDILEWMCIR	YRLDILEWMC(UniMod:4)IR	3	YRLDILEWMC(UniMod:4)IR3	5399.18	3730.91	3694.89
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	YRPASEEAQADSGIPDLESVK	YRPASEEAQADSGIPDLESVK	3	YRPASEEAQADSGIPDLESVK3	152195	148424	150588
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	YRPDLVDMER	YRPDLVDMER	3	YRPDLVDMER3	104085	81083.4	87640.7
A2VD12	A2VD12	PBIP1_RAT	Pbxip1	Pre-B-cell leukemia transcription factor-interacting protein 1	1	YRPPQGCSGVADCAR	YRPPQGC(UniMod:4)SGVADC(UniMod:4)AR	3	YRPPQGC(UniMod:4)SGVADC(UniMod:4)AR3	4190.6	5905.82	8621.89
A0A0G2JXM1	A0A0G2JXM1	A0A0G2JXM1_RAT	Ctnnd1	Catenin delta 1	1	YRPSMEGYR	YRPSMEGYR	3	YRPSMEGYR3	56811.6	48483.4	49139.6
P22273	P22273	IL6RA_RAT	Il6r	Interleukin-6 receptor subunit alpha	1	YRPVWSK	YRPVWSK	2	YRPVWSK2	12507.1	6312.26	7292.43
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	YRPYDSSASAYAENHR	YRPYDSSASAYAENHR	3	YRPYDSSASAYAENHR3	6115.92	11266.7	9663.84
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	YRPYDSSASAYAENHR	YRPYDSSASAYAENHR	4	YRPYDSSASAYAENHR4	9051.46	6636.09	5295.56
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	YRQDLELSR	YRQDLELSR	2	YRQDLELSR2	3810.36	2310.81	1672.87
Q6P6S4	Q6P6S4	SIL1_RAT	Sil1	Nucleotide exchange factor SIL1	1	YRQDLELSR	YRQDLELSR	3	YRQDLELSR3	146821	169271	165281
D3ZEE4	D3ZEE4	D3ZEE4_RAT	Plxdc1	Plexin domain containing 1	1	YRQEWLTYGCAQEAEGK	YRQEWLTYGC(UniMod:4)AQEAEGK	3	YRQEWLTYGC(UniMod:4)AQEAEGK3	16426.8	13294.2	15340.8
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	YRSDIHTEAVQAALAK	YRSDIHTEAVQAALAK	3	YRSDIHTEAVQAALAK3	2952.63		
A0A0G2JY22	A0A0G2JY22	A0A0G2JY22_RAT	Dip2b	Disco-interacting protein 2 homolog B	1	YRSDIHTEAVQAALAK	YRSDIHTEAVQAALAK	4	YRSDIHTEAVQAALAK4	3211.87	7502.89	10356.2
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	YRVEQVGDMIDR	YRVEQVGDMIDR	3	YRVEQVGDMIDR3	13383.2	12981.2	20298.1
A0A8I6GKX8	A0A8I6GKX8	A0A8I6GKX8_RAT	Iqsec2	IQ motif and Sec7 domain ArfGEF 2	1	YRVESELEK	YRVESELEK	3	YRVESELEK3	2761.1	1695.06	
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	YRVFALDQK	YRVFALDQK	2	YRVFALDQK2	129315	220391	200989
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	YRVFALDQK	YRVFALDQK	3	YRVFALDQK3	758106	1.16877e+06	1.3111e+06
F1M7B8	F1M7B8	F1M7B8_RAT	Ube3a	Ubiquitin-protein ligase E3A	1	YSADQIR	YSADQIR	2	YSADQIR2	27364.3	41556.4	31920.6
D3ZW15	D3ZW15	D3ZW15_RAT	Sec24b	SEC24 homolog B, COPII coat complex component	1	YSAGCIFYYPSFHSTHNPSQAEK	YSAGC(UniMod:4)IFYYPSFHSTHNPSQAEK	4	YSAGC(UniMod:4)IFYYPSFHSTHNPSQAEK4		15262.1	15325.3
Q5M834	Q5M834	DTBP1_RAT	Dtnbp1	Dysbindin	1	YSAGLDLLSR	YSAGLDLLSR	2	YSAGLDLLSR2	11673	24027.5	18562.7
A0A0G2K2Z0	A0A0G2K2Z0	A0A0G2K2Z0_RAT	Eml4	EMAP like 4	1	YSAHSSHVTNVSFTHNDSHLISTGGK	YSAHSSHVTNVSFTHNDSHLISTGGK	4	YSAHSSHVTNVSFTHNDSHLISTGGK4	8374.7	3565.62	3421.25
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	YSAINEINK	YSAINEINK	2	YSAINEINK2	5853.64	4934.6	4102.69
P29419	P29419	ATP5I_RAT	Atp5me	ATP synthase subunit e, mitochondrial	1	YSALILGMAYGAK	YSALILGMAYGAK	2	YSALILGMAYGAK2	372150	360548	369945
P29419	P29419	ATP5I_RAT	Atp5me	ATP synthase subunit e, mitochondrial	1	YSALILGMAYGAK	YSALILGMAYGAK	3	YSALILGMAYGAK3	3106.61	3740.23	6767.21
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	YSALNVQHQMLK	YSALNVQHQMLK	2	YSALNVQHQMLK2	2058.94	4192.82	1668.64
Q5BJK8	Q5BJK8	GOLI4_RAT	Golim4	Golgi integral membrane protein 4	1	YSALNVQHQMLK	YSALNVQHQMLK	3	YSALNVQHQMLK3	61647.9	66395.5	59658.2
Q64604	A0A8I6A1V1;Q64604	PTPRF_RAT	Ptprf	Receptor-type tyrosine-protein phosphatase F	0	YSAPANLYVR	YSAPANLYVR	2	YSAPANLYVR2	26425.6	24437.1	23471.3
D4ACD2	D4ACD2	D4ACD2_RAT	Bach1	BTB domain and CNC homolog 1	1	YSASDCPLSFLISEK	YSASDC(UniMod:4)PLSFLISEK	2	YSASDC(UniMod:4)PLSFLISEK2	5210.17	8124.15	13631.2
Q925N6	Q925N6	IGSF1_RAT	Igsf1	Immunoglobulin superfamily member 1	1	YSCCYHPDWMSPIK	YSC(UniMod:4)C(UniMod:4)YHPDWMSPIK	3	YSC(UniMod:4)C(UniMod:4)YHPDWMSPIK3	10221.3	17393.5	11200.8
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	YSCDPGYFLVGEDTIHCTSEGK	YSC(UniMod:4)DPGYFLVGEDTIHC(UniMod:4)TSEGK	3	YSC(UniMod:4)DPGYFLVGEDTIHC(UniMod:4)TSEGK3	34255	34339	52898.1
O88775	O88775	EMB_RAT	Emb	Embigin	1	YSCFLGEELR	YSC(UniMod:4)FLGEELR	2	YSC(UniMod:4)FLGEELR2	23482.6	26099.5	30286
D3ZKH2	D3ZKH2	D3ZKH2_RAT	Mon2	Protein MON2 homolog	1	YSCPSESTWK	YSC(UniMod:4)PSESTWK	2	YSC(UniMod:4)PSESTWK2	12277.6	12422.3	9192.56
Q8CHN8	Q8CHN8	MASP1_RAT	Masp1	Mannan-binding lectin serine protease 1	1	YSCQQPYYK	YSC(UniMod:4)QQPYYK	2	YSC(UniMod:4)QQPYYK2	1.59601e+06	1.45902e+06	1.59413e+06
E9PTZ1	E9PTZ1	E9PTZ1_RAT	Pear1	Platelet endothelial aggregation receptor 1	1	YSCSYGHR	YSC(UniMod:4)SYGHR	2	YSC(UniMod:4)SYGHR2			7928.66
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	YSCTASNTLGQVSCSWTLR	YSC(UniMod:4)TASNTLGQVSC(UniMod:4)SWTLR	3	YSC(UniMod:4)TASNTLGQVSC(UniMod:4)SWTLR3	27829.7	31700.2	31858.2
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	YSCVATNVAGSQHR	YSC(UniMod:4)VATNVAGSQHR	2	YSC(UniMod:4)VATNVAGSQHR2		1640.85	
A0A8I5ZQ55	A0A8I5ZQ55	A0A8I5ZQ55_RAT	Hmcn2	Hemicentin 2	1	YSCVATNVAGSQHR	YSC(UniMod:4)VATNVAGSQHR	3	YSC(UniMod:4)VATNVAGSQHR3	22810.5	25359.2	20594.4
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	YSCVCPGGGFAK	YSC(UniMod:4)VC(UniMod:4)PGGGFAK	2	YSC(UniMod:4)VC(UniMod:4)PGGGFAK2	42839.1	34092	40622.2
Q9QW30	Q9QW30	NOTC2_RAT	Notch2	Neurogenic locus notch homolog protein 2	1	YSCVCSPGFTGQR	YSC(UniMod:4)VC(UniMod:4)SPGFTGQR	2	YSC(UniMod:4)VC(UniMod:4)SPGFTGQR2	50059.1	50273	43118.7
Q5PQQ8	Q5PQQ8	ITGBL_RAT	Itgbl1	Integrin beta-like protein 1	1	YSDDFCSGHGQCNCGR	YSDDFC(UniMod:4)SGHGQC(UniMod:4)NC(UniMod:4)GR	3	YSDDFC(UniMod:4)SGHGQC(UniMod:4)NC(UniMod:4)GR3	22498	34356.2	34430.8
Q64537	Q64537	CPNS1_RAT	Capns1	Calpain small subunit 1	1	YSDETGNMDFDNFISCLVR	YSDETGNMDFDNFISC(UniMod:4)LVR	3	YSDETGNMDFDNFISC(UniMod:4)LVR3	34936.2	26248.8	37627.9
Q5U211	Q5U211	SNX3_RAT	Snx3	Sorting nexin-3	1	YSDFEWLR	YSDFEWLR	2	YSDFEWLR2	8253.06	5137.49	9770.99
F1LTF8	F1LTF8	F1LTF8_RAT	Lama4	Laminin subunit alpha 4	1	YSDGLWHDVIFIR	YSDGLWHDVIFIR	3	YSDGLWHDVIFIR3	12781.3	11405.9	10648.3
F1LQP9	F1LQP9	F1LQP9_RAT	Tnpo1	Transportin 1	1	YSDIDIILLK	YSDIDIILLK	2	YSDIDIILLK2	68014.8	89785.3	59789
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	YSDIEPSTEGEVIFR	YSDIEPSTEGEVIFR	2	YSDIEPSTEGEVIFR2	129100	140858	120053
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	YSDIEPSTEGEVIFR	YSDIEPSTEGEVIFR	3	YSDIEPSTEGEVIFR3	5547.52	5007.88	7169.03
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	YSDNWEAVTR	YSDNWEAVTR	2	YSDNWEAVTR2	25682.6	30491.9	33715.4
Q64560	Q64560	TPP2_RAT	Tpp2	Tripeptidyl-peptidase 2	1	YSDPGPVYDCLVWHDGETWR	YSDPGPVYDC(UniMod:4)LVWHDGETWR	3	YSDPGPVYDC(UniMod:4)LVWHDGETWR3	25737.7	22674.4	33972.6
P69478	P69478	CHSTB_RAT	Chst11	Carbohydrate sulfotransferase 11	1	YSDPMEIPANEAHVSANLK	YSDPMEIPANEAHVSANLK	3	YSDPMEIPANEAHVSANLK3	10461.2	7102.61	9364.06
A0A0G2K3H2	A0A0G2K3H2	A0A0G2K3H2_RAT	Dock7	Dedicator of cytokinesis 7	1	YSDPQIK	YSDPQIK	2	YSDPQIK2	61157.3	59608.7	63351.6
A0A8I6ALB1	A0A8I6ALB1	A0A8I6ALB1_RAT	Ckap5	Cytoskeleton associated protein 5	1	YSDTDIEPFLK	YSDTDIEPFLK	2	YSDTDIEPFLK2	27107.7	19110.5	28917.8
Q63028	Q63028	ADDA_RAT	Add1	Alpha-adducin	1	YSDVEVPASVTGHSFASDGDSGTCSPLR	YSDVEVPASVTGHSFASDGDSGTC(UniMod:4)SPLR	3	YSDVEVPASVTGHSFASDGDSGTC(UniMod:4)SPLR3	138196	133718	134674
Q5PQM2	Q5PQM2	KLC4_RAT	Klc4	Kinesin light chain 4	1	YSEAETLYK	YSEAETLYK	2	YSEAETLYK2	19470.5	21423.4	16031.7
Q6IUU3	Q6IUU3	QSOX1_RAT	Qsox1	Sulfhydryl oxidase 1	1	YSEAHPQEPADGQEVLQAMR	YSEAHPQEPADGQEVLQAMR	3	YSEAHPQEPADGQEVLQAMR3	29674.1	36319.8	25920.8
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	YSEEILGPLDHDDQCGK	YSEEILGPLDHDDQC(UniMod:4)GK	3	YSEEILGPLDHDDQC(UniMod:4)GK3	32207.3	39215.6	23152.9
A0A8I6AAD8	A0A8I6AAD8	A0A8I6AAD8_RAT	Snx4	Sorting nexin 4	1	YSEFELLR	YSEFELLR	2	YSEFELLR2	14238.8	11077	11582.5
Q91ZS3	Q91ZS3	CAB45_RAT	Sdf4	45 kDa calcium-binding protein	1	YSEFFTGSK	YSEFFTGSK	2	YSEFFTGSK2	79281.1	89238.3	83188.6
P16310	P16310	GHR_RAT	Ghr	Growth hormone receptor	1	YSEFSEVLR	YSEFSEVLR	2	YSEFSEVLR2	18625.2	16791.4	26097.4
B5DFL6	B5DFL6	B5DFL6_RAT	Cmtm3	CKLF-like MARVEL transmembrane domain containing 3	1	YSEGAYK	YSEGAYK	2	YSEGAYK2	64679.7	74780.7	86480.6
A0A8I6GL10	A0A8I6GL10	A0A8I6GL10_RAT	Uchl5	Ubiquitin carboxyl-terminal hydrolase	1	YSEGEIR	YSEGEIR	2	YSEGEIR2	29858.5	30902.7	19101.6
Q5U3Z7	Q5U3Z7	Q5U3Z7_RAT	Shmt2	Serine hydroxymethyltransferase	1	YSEGYPGK	YSEGYPGK	2	YSEGYPGK2	47711.9	40095.4	56986.3
A0A8I5ZKU9	A0A8I5ZKU9	A0A8I5ZKU9_RAT	Shmt1	Serine hydroxymethyltransferase	1	YSEGYPGQR	YSEGYPGQR	2	YSEGYPGQR2	8415.51	5547.16	8203.1
A0A8I6GK52	A0A8I6GK52	A0A8I6GK52_RAT	Smg1	non-specific serine/threonine protein kinase	1	YSEHTQLQTQQR	YSEHTQLQTQQR	3	YSEHTQLQTQQR3	5430.79	12011.6	7289.38
D3ZER6	D3ZER6	D3ZER6_RAT	Tnpo2	Transportin 2	1	YSEIDIILLK	YSEIDIILLK	2	YSEIDIILLK2	16123.2	75470.9	36166.9
D4A6D9	D4A6D9	D4A6D9_RAT	Hs1bp3	HCLS1 binding protein 3	1	YSEIEEFYQK	YSEIEEFYQK	2	YSEIEEFYQK2	4688.65	2022.96	3654.31
P15800	P15800	LAMB2_RAT	Lamb2	Laminin subunit beta-2	1	YSEIEPSTEGEVIYR	YSEIEPSTEGEVIYR	2	YSEIEPSTEGEVIYR2	6327	8235.52	6655.7
P09495	P09495	TPM4_RAT	Tpm4	Tropomyosin alpha-4 chain	1	YSEKEDK	YSEKEDK	1	YSEKEDK1	1156.55		3638.67
A0A0G2KA50	A0A0G2KA50	A0A0G2KA50_RAT	Vps39	VPS39 subunit of HOPS complex	1	YSELIILYEK	YSELIILYEK	2	YSELIILYEK2	4717	10961.8	5002.85
A0A8I6AHQ9	A0A8I6AHQ9	A0A8I6AHQ9_RAT	Xpot	Exportin-T	1	YSELSTAQQQLIR	YSELSTAQQQLIR	2	YSELSTAQQQLIR2	7266.58	8690.01	9520.74
G3V8Y8	G3V8Y8	G3V8Y8_RAT	Hip1	Huntingtin interacting protein 1	1	YSELVQNHADLLR	YSELVQNHADLLR	3	YSELVQNHADLLR3	5447.45	7188.64	8128.28
Q5U4E6	Q5U4E6	GOGA4_RAT	Golga4	Golgin subfamily A member 4	1	YSELVTAFQTLQR	YSELVTAFQTLQR	3	YSELVTAFQTLQR3		3842.62	3844.77
D4ABV0	D4ABV0	D4ABV0_RAT	Smim26	Small integral membrane protein 26	1	YSENSVPVTQR	YSENSVPVTQR	2	YSENSVPVTQR2	4986.56	5185.02	
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	YSEPERPSSR	YSEPERPSSR	3	YSEPERPSSR3	57720.8		69623
F1LNT3	F1LNT3	F1LNT3_RAT	R3hdm1	R3H domain containing 1	1	YSEPRPWSSTDSDSSLR	YSEPRPWSSTDSDSSLR	3	YSEPRPWSSTDSDSSLR3	6332.59	4127.89	7071.37
A0A8I6ANR6	A0A8I6ANR6	A0A8I6ANR6_RAT	Chuk	IkappaB kinase	1	YSEQMTYGISSEK	YSEQMTYGISSEK	2	YSEQMTYGISSEK2	4302.68	4446.72	4970.99
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	YSEVFEAINITNNEK	YSEVFEAINITNNEK	2	YSEVFEAINITNNEK2	32632	26599.4	24711.4
P19139	P19139	CSK21_RAT	Csnk2a1	Casein kinase II subunit alpha	1	YSEVFEAINITNNEK	YSEVFEAINITNNEK	3	YSEVFEAINITNNEK3	13260.5	9589.4	11478.6
F7FH41	F7FH41	F7FH41_RAT	Csnk2a2	Casein kinase 2 alpha 2	1	YSEVFEAINITNNER	YSEVFEAINITNNER	2	YSEVFEAINITNNER2	11489.7	9116.29	12565.6
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	YSFCTDHAVLVQTR	YSFC(UniMod:4)TDHAVLVQTR	2	YSFC(UniMod:4)TDHAVLVQTR2	2.49075e+06	3.02587e+06	2.7422e+06
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	YSFCTDHAVLVQTR	YSFC(UniMod:4)TDHAVLVQTR	3	YSFC(UniMod:4)TDHAVLVQTR3	117101	139506	147916
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	YSFCTDHAVLVQTR	YSFC(UniMod:4)TDHAVLVQTR	4	YSFC(UniMod:4)TDHAVLVQTR4	18015.9	32027.2	22295.5
P30839	P30839	AL3A2_RAT	Aldh3a2	Aldehyde dehydrogenase family 3 member A2	1	YSFDTFSHQR	YSFDTFSHQR	3	YSFDTFSHQR3	2854.23		4807.4
P30839	P30839	AL3A2_RAT	Aldh3a2	Aldehyde dehydrogenase family 3 member A2	1	YSFDTFSHQRPCLLK	YSFDTFSHQRPC(UniMod:4)LLK	3	YSFDTFSHQRPC(UniMod:4)LLK3	14228.3	9189.86	11505.2
P30839	P30839	AL3A2_RAT	Aldh3a2	Aldehyde dehydrogenase family 3 member A2	1	YSFDTFSHQRPCLLK	YSFDTFSHQRPC(UniMod:4)LLK	4	YSFDTFSHQRPC(UniMod:4)LLK4	20922.9	25634.7	33879.3
Q4FZV0	Q4FZV0	MANBA_RAT	Manba	Beta-mannosidase	1	YSFDVTNVVK	YSFDVTNVVK	2	YSFDVTNVVK2	31617.1	32912.7	22979.2
D4A7R3	D4A7R3	D4A7R3_RAT	Nup205	Nucleoporin 205	1	YSFIQALVR	YSFIQALVR	2	YSFIQALVR2	6286.97	5320.4	6743.55
P62716	A0A0G2JYA4;P63331;P62716	PP2AB_RAT	Ppp2cb	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	0	YSFLQFDPAPR	YSFLQFDPAPR	2	YSFLQFDPAPR2	460086	413199	431681
Q9EQV9	Q9EQV9	CBPB2_RAT	Cpb2	Carboxypeptidase B2	1	YSFTIELR	YSFTIELR	2	YSFTIELR2	30802.6	27440	25519.2
Q9WVJ6	Q9WVJ6	TGM2_RAT	Tgm2	Protein-glutamine gamma-glutamyltransferase 2	1	YSGCLTESNLIK	YSGC(UniMod:4)LTESNLIK	2	YSGC(UniMod:4)LTESNLIK2	4145.42	6699.94	9076.32
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	YSGDNLIYKPPGR	YSGDNLIYKPPGR	2	YSGDNLIYKPPGR2	16677.7	10682.9	11006.5
Q5VLR5	Q5VLR5	Q5VLR5_RAT	Erp44	Endoplasmic reticulum protein 44	1	YSGDNLIYKPPGR	YSGDNLIYKPPGR	3	YSGDNLIYKPPGR3	493070	460573	425291
A0A0G2JUJ9	A0A0G2JUJ9	A0A0G2JUJ9_RAT	Sec63	SEC63 homolog, protein translocation regulator	1	YSGDQILIR	YSGDQILIR	2	YSGDQILIR2	8565.08	9024.5	13995.8
D3ZR69	D3ZR69	D3ZR69_RAT	Gas2l1	Growth arrest-specific 2 like 1	1	YSGDSDSSASSAQSGPMGAR	YSGDSDSSASSAQSGPMGAR	2	YSGDSDSSASSAQSGPMGAR2	5773.45	7935.54	3934.21
B0BNN3	B0BNN3	CAH1_RAT	Ca1	Carbonic anhydrase 1	1	YSGELHLVHWNSAK	YSGELHLVHWNSAK	3	YSGELHLVHWNSAK3	6313.42		1447.67
E9PU02	E9PU02	E9PU02_RAT	Trappc9	Trafficking protein particle complex subunit 9	1	YSGGPGHVEGYYR	YSGGPGHVEGYYR	3	YSGGPGHVEGYYR3	18158.9	18109.1	
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	YSGLQPHVVVLVATVR	YSGLQPHVVVLVATVR	3	YSGLQPHVVVLVATVR3	33333.9	28143.3	28278.9
P05942	P05942	S10A4_RAT	S100a4	Protein S100-A4	1	YSGNEGDKFK	YSGNEGDKFK	2	YSGNEGDKFK2		228811	
P05942	P05942	S10A4_RAT	S100a4	Protein S100-A4	1	YSGNEGDKFK	YSGNEGDKFK	3	YSGNEGDKFK3		1.0423e+06	3441.96
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	YSGNPLDPPLR	YSGNPLDPPLR	2	YSGNPLDPPLR2	14075.3	15148.8	15879.3
P14562	P14562	LAMP1_RAT	Lamp1	Lysosome-associated membrane glycoprotein 1	1	YSGTCGAQLVTLK	YSGTC(UniMod:4)GAQLVTLK	2	YSGTC(UniMod:4)GAQLVTLK2	103124	112667	143338
P14562	P14562	LAMP1_RAT	Lamp1	Lysosome-associated membrane glycoprotein 1	1	YSGTCGAQLVTLK	YSGTC(UniMod:4)GAQLVTLK	3	YSGTC(UniMod:4)GAQLVTLK3	5211.8	5363.91	3490.29
P97521	P97521	MCAT_RAT	Slc25a20	Mitochondrial carnitine/acylcarnitine carrier protein	1	YSGTLDCAK	YSGTLDC(UniMod:4)AK	2	YSGTLDC(UniMod:4)AK2	169124	142632	148174
B0BN30	B0BN30	B0BN30_RAT	Mtch1	Mitochondrial carrier 1	1	YSGVLSSIGK	YSGVLSSIGK	2	YSGVLSSIGK2	18233.2	17914.3	18235.9
P49651	P49651	P2RY1_RAT	P2ry1	P2Y purinoceptor 1	1	YSGVVYPLK	YSGVVYPLK	2	YSGVVYPLK2	39429.4	46883.6	48039.5
B1WBN7	B1WBN7	B1WBN7_RAT	Fam20c	FAM20C	1	YSHDELSILAPLHQCCR	YSHDELSILAPLHQC(UniMod:4)C(UniMod:4)R	3	YSHDELSILAPLHQC(UniMod:4)C(UniMod:4)R3	13056.1	16081.5	
B1WBN7	B1WBN7	B1WBN7_RAT	Fam20c	FAM20C	1	YSHDELSILAPLHQCCR	YSHDELSILAPLHQC(UniMod:4)C(UniMod:4)R	4	YSHDELSILAPLHQC(UniMod:4)C(UniMod:4)R4	43369.3	37478.2	36934.7
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	YSHDFNFHINYGDLGFLGPEDLR	YSHDFNFHINYGDLGFLGPEDLR	3	YSHDFNFHINYGDLGFLGPEDLR3	19954.2	22143.5	16963.4
Q63617	Q63617	HYOU1_RAT	Hyou1	Hypoxia up-regulated protein 1	1	YSHDFNFHINYGDLGFLGPEDLR	YSHDFNFHINYGDLGFLGPEDLR	4	YSHDFNFHINYGDLGFLGPEDLR4	93301.7	74613	73740.8
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	YSHDIALLELDK	YSHDIALLELDK	2	YSHDIALLELDK2	27394.4	20051.1	22207
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	YSHDIALLELDK	YSHDIALLELDK	3	YSHDIALLELDK3	141524	133698	132589
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	YSHDIALLELDKPLILNSYVTPICVANK	YSHDIALLELDKPLILNSYVTPIC(UniMod:4)VANK	4	YSHDIALLELDKPLILNSYVTPIC(UniMod:4)VANK4	2.18838e+06	1.62963e+06	1.63901e+06
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	YSHDVLSEQNFQILK	YSHDVLSEQNFQILK	2	YSHDVLSEQNFQILK2	1452.57	4983.6	2043.55
Q8K3Y6	Q8K3Y6	ZCCHV_RAT	Zc3hav1	Zinc finger CCCH-type antiviral protein 1	1	YSHDVLSEQNFQILK	YSHDVLSEQNFQILK	3	YSHDVLSEQNFQILK3	16506	15648.6	13264.4
D4A7F0	D4A7F0	D4A7F0_RAT	Ubr3	E3 ubiquitin-protein ligase	1	YSHGDGITAVER	YSHGDGITAVER	3	YSHGDGITAVER3	9247.2	17641.5	12125.6
Q62609	Q62609	NOE1_RAT	Olfm1	Noelin	1	YSHISMLDYNPK	YSHISMLDYNPK	3	YSHISMLDYNPK3	17259	14901.8	11728.3
F1M0Q9	F1M0Q9	F1M0Q9_RAT	Pm20d1	Peptidase M20 domain containing 1	1	YSHLLTVR	YSHLLTVR	2	YSHLLTVR2	21464.5	33598.8	20852.6
Q9ERH3	Q9ERH3	WDR7_RAT	Wdr7	WD repeat-containing protein 7	1	YSHNSLMVQAIK	YSHNSLMVQAIK	3	YSHNSLMVQAIK3	8029.99	6188.47	6366.46
A0A8I6GK59	A0A8I6GK59	A0A8I6GK59_RAT	Bmp2k	BMP-2 inducible kinase	1	YSHNVHCLIR	YSHNVHC(UniMod:4)LIR	3	YSHNVHC(UniMod:4)LIR3	3088.22	3199.57	
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	YSHVQEVQER	YSHVQEVQER	2	YSHVQEVQER2	32909.6	29565.7	20794.9
A0A0G2K2C7	A0A0G2JZU8;A0A0G2K2C7	A0A0G2K2C7_RAT	Usp9x	ubiquitinyl hydrolase 1	0	YSHVQEVQER	YSHVQEVQER	3	YSHVQEVQER3	154691	207000	
P55161	P55161	NCKP1_RAT	Nckap1	Nck-associated protein 1	1	YSIAFPLLCTHFMSCTHELCPEER	YSIAFPLLC(UniMod:4)THFMSC(UniMod:4)THELC(UniMod:4)PEER	4	YSIAFPLLC(UniMod:4)THFMSC(UniMod:4)THELC(UniMod:4)PEER4	31803.4	25462.5	26261.5
A0A0G2QC33	A0A0G2QC33	ATG4B_RAT	Atg4b	Cysteine protease ATG4B	1	YSIFTEK	YSIFTEK	2	YSIFTEK2	56311.6	77739.1	59707.1
A0A0G2QC33	A0A0G2QC33	ATG4B_RAT	Atg4b	Cysteine protease ATG4B	1	YSIFTEKDEILSDVASR	YSIFTEKDEILSDVASR	3	YSIFTEKDEILSDVASR3	9867.49	6537.73	8219
D3ZJR7	D3ZJR7	D3ZJR7_RAT	Dsc2	Desmocollin 2	1	YSILEQSPSPPMLFTMHPR	YSILEQSPSPPMLFTMHPR	3	YSILEQSPSPPMLFTMHPR3	64712	69425.2	57795.4
Q8R508	Q8R508	FAT3_RAT	Fat3	Protocadherin Fat 3	1	YSILNPGNK	YSILNPGNK	2	YSILNPGNK2	2263.02		3940.41
A0A096MKE0	A0A096MKE0	A0A096MKE0_RAT	Asph	Aspartate-beta-hydroxylase	1	YSIMHPGTHVWPHTGPTNCR	YSIMHPGTHVWPHTGPTNC(UniMod:4)R	4	YSIMHPGTHVWPHTGPTNC(UniMod:4)R4	4216.6	2529.79	5113.26
A0A0G2K0I6	A0A0G2K0I6	A0A0G2K0I6_RAT	Cdh5	Cadherin 5	1	YSIMQGEYR	YSIMQGEYR	2	YSIMQGEYR2	64951.9	54874.5	48984
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	YSIPVNDTR	YSIPVNDTR	2	YSIPVNDTR2	89296.4	120767	108244
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	YSISAGDR	YSISAGDR	2	YSISAGDR2	31786.3	27445.8	27094.2
M0R5U4	M0R5U4	M0R5U4_RAT	Adcy9	Adenylate cyclase 9	1	YSISSSCSSSGDSGGLPR	YSISSSC(UniMod:4)SSSGDSGGLPR	2	YSISSSC(UniMod:4)SSSGDSGGLPR2	881.962		1976.71
Q9WV75	Q9WV75	SPON2_RAT	Spon2	Spondin-2	1	YSITFTGK	YSITFTGK	2	YSITFTGK2	12643.6	10640.4	8854.28
F1LRL4	F1LRL4	F1LRL4_RAT	Tbc1d9b	TBC1 domain family member 9B	1	YSLATEEIER	YSLATEEIER	2	YSLATEEIER2	36852.8	50528.8	42615.2
Q3KRD5	Q3KRD5	TOM34_RAT	Tomm34	Mitochondrial import receptor subunit TOM34	1	YSLAYVDYK	YSLAYVDYK	2	YSLAYVDYK2	8155.03	3325.43	6938.18
D3Z9L5	D3Z9L5	D3Z9L5_RAT	Wdr11	WD repeat domain 11	1	YSLDISHIDYPENEEIK	YSLDISHIDYPENEEIK	3	YSLDISHIDYPENEEIK3	20396.6	23932.5	17877.5
P24049	D3Z9G9;A0A8I5ZRW8;A0A8I6A6U8;P24049;Q7TPJ7;A0A8I5ZUD0	RL17_RAT	Rpl17	Large ribosomal subunit protein uL22	0	YSLDPENPTK	YSLDPENPTK	2	YSLDPENPTK2	31033.3	32600.8	27564.9
P16617	P16617;M0R6Y8	PGK1_RAT	Pgk1	Phosphoglycerate kinase 1	0	YSLEPVAAELK	YSLEPVAAELK	2	YSLEPVAAELK2	129059	132747	134983
P03889	P03889	NU1M_RAT	Mtnd1	NADH-ubiquinone oxidoreductase chain 1	1	YSLFGALR	YSLFGALR	2	YSLFGALR2	34754.2	27208	32014.5
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	YSLFLVCEDSSK	YSLFLVC(UniMod:4)EDSSK	2	YSLFLVC(UniMod:4)EDSSK2	7035.77	7830.43	7305.15
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	YSLFLVCEDSSKDK	YSLFLVC(UniMod:4)EDSSKDK	2	YSLFLVC(UniMod:4)EDSSKDK2	4255.81	4836.6	2344.16
O54735	O54735	PDE5A_RAT	Pde5a	cGMP-specific 3',5'-cyclic phosphodiesterase	1	YSLFLVCEDSSKDK	YSLFLVC(UniMod:4)EDSSKDK	3	YSLFLVC(UniMod:4)EDSSKDK3	17999.8	15972.8	6010.87
Q5XI64	Q5XI64	ABHD6_RAT	Abhd6	Monoacylglycerol lipase ABHD6	1	YSLHENMDK	YSLHENMDK	2	YSLHENMDK2	1876.88	2903.1	2000.73
Q5I0C3	Q5I0C3	MCCA_RAT	Mccc1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	1	YSLHQYNIVGLR	YSLHQYNIVGLR	3	YSLHQYNIVGLR3	12165.4	14808.5	11516
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	YSLIDPASAPELLR	YSLIDPASAPELLR	2	YSLIDPASAPELLR2	277518	272515	249245
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	YSLIDPASAPELLR	YSLIDPASAPELLR	3	YSLIDPASAPELLR3	11552.6	5738.69	8422.31
Q64640	Q64640	ADK_RAT	Adk	Adenosine kinase	1	YSLKPNDQILAEDK	YSLKPNDQILAEDK	3	YSLKPNDQILAEDK3	12786	5742.68	18015.8
Q64640	Q64640	ADK_RAT	Adk	Adenosine kinase	1	YSLKPNDQILAEDKHK	YSLKPNDQILAEDKHK	4	YSLKPNDQILAEDKHK4	6944.63		
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	YSLLDHGEGHFDVDK	YSLLDHGEGHFDVDK	3	YSLLDHGEGHFDVDK3	22221.3	26989.8	18161.5
A0A0G2K5L1	A0A0G2K5L1	A0A0G2K5L1_RAT	Fat1	FAT atypical cadherin 1	1	YSLLDHGEGHFDVDK	YSLLDHGEGHFDVDK	4	YSLLDHGEGHFDVDK4	23053.9	17224.3	22337.5
D3ZES7	D3ZPX4;A0A8I6AGW9;D3ZWP6;D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	0	YSLSEDK	YSLSEDK	2	YSLSEDK2	64636	83708.4	67066.6
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	YSLSEPLQK	YSLSEPLQK	2	YSLSEPLQK2	989670	1.08365e+06	1.11837e+06
B0LT89	B0LT89	STK24_RAT	Stk24	Serine/threonine-protein kinase 24	1	YSLSGGGASAH	YSLSGGGASAH	2	YSLSGGGASAH2	334567	359042	373085
F7ETS0	F7ETS0	F7ETS0_RAT	Acot9	Acyl-CoA thioesterase 9	1	YSLSPEQDIK	YSLSPEQDIK	2	YSLSPEQDIK2	31475.9	20087	25979.8
P07897	P07897	PGCA_RAT	Acan	Aggrecan core protein	1	YSLTFEEAQQACIR	YSLTFEEAQQAC(UniMod:4)IR	2	YSLTFEEAQQAC(UniMod:4)IR2	1393.46		
F1LMV6	F1LMV6	DESP_RAT	Dsp	Desmoplakin	1	YSLVEAK	YSLVEAK	2	YSLVEAK2	4971.37	5046.83	1890.42
D3Z9D2	D3Z9D2	D3Z9D2_RAT	Fyco1	FYVE and coiled-coil domain autophagy adaptor 1	1	YSLVHQR	YSLVHQR	2	YSLVHQR2	65255.4	40672.3	68809.7
P38718	P38718	MPC2_RAT	Mpc2	Mitochondrial pyruvate carrier 2	1	YSLVIIPK	YSLVIIPK	2	YSLVIIPK2	27747.3	27150	23599.5
Q7TP48	Q7TP48	APMAP_RAT	Apmap	Adipocyte plasma membrane-associated protein	1	YSLVLEVSDSGAFRR	YSLVLEVSDSGAFRR	3	YSLVLEVSDSGAFRR3	7468.14	7166.27	
Q6IRK9	Q6IRK9	CBPQ_RAT	Cpq	Carboxypeptidase Q	1	YSLVMEADSGTFLPTGLQFTGSDK	YSLVMEADSGTFLPTGLQFTGSDK	3	YSLVMEADSGTFLPTGLQFTGSDK3	15094.6	9736.97	13198.3
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	YSLWFPAETFHK	YSLWFPAETFHK	2	YSLWFPAETFHK2	85614.3	108888	63045
D3ZSC1	D3ZSC1	D3ZSC1_RAT	Susd5	Sushi domain containing 5	1	YSLWFPAETFHK	YSLWFPAETFHK	3	YSLWFPAETFHK3	59375.9	87846.2	82312.5
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	YSLYEVHVSGER	YSLYEVHVSGER	3	YSLYEVHVSGER3	2052.11	11721.5	7888.56
Q68G12	Q68G12	SIAT9_RAT	St3gal5	Lactosylceramide alpha-2,3-sialyltransferase	1	YSMDLEPFVQK	YSMDLEPFVQK	2	YSMDLEPFVQK2	3905.71	7054.1	7712.46
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	YSMPDNSPETR	YSMPDNSPETR	2	YSMPDNSPETR2	28193.2	30574.4	29749.4
P24268	P24268	CATD_RAT	Ctsd	Cathepsin D	1	YSMQSSPR	YSMQSSPR	2	YSMQSSPR2	30650.7	27598.7	16397.6
G3V8K8	G3V8K8	G3V8K8_RAT	Proz	Protein Z, vitamin K-dependent plasma glycoprotein	1	YSMWFNQIMK	YSMWFNQIMK	2	YSMWFNQIMK2	6594.91	3.9749e+06	4.13793e+06
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	YSNDPVVASLAQDIFK	YSNDPVVASLAQDIFK	2	YSNDPVVASLAQDIFK2	26962.6	25339.7	22210.8
D4A857	D4A857	D4A857_RAT	Ipo9	Importin 9	1	YSNDPVVASLAQDIFK	YSNDPVVASLAQDIFK	3	YSNDPVVASLAQDIFK3	10479.2	8053.23	7772.81
Q5XHZ0	Q5XHZ0	TRAP1_RAT	Trap1	Heat shock protein 75 kDa, mitochondrial	1	YSNFVSFPLYLNGR	YSNFVSFPLYLNGR	2	YSNFVSFPLYLNGR2	16915.2	11909.6	8466.65
G3V965	G3V965	G3V965_RAT	Agpat5	1-acylglycerol-3-phosphate O-acyltransferase 5	1	YSNPPSMTEFLCK	YSNPPSMTEFLC(UniMod:4)K	2	YSNPPSMTEFLC(UniMod:4)K2	263641	283399	273302
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	YSNSALGHVNSTIK	YSNSALGHVNSTIK	2	YSNSALGHVNSTIK2	113571	109139	96951.6
Q9JK11	Q9JK11	RTN4_RAT	Rtn4	Reticulon-4	1	YSNSALGHVNSTIK	YSNSALGHVNSTIK	3	YSNSALGHVNSTIK3	1.28085e+06	1.08223e+06	1.0797e+06
A0A1W2Q641	A0A1W2Q641	A0A1W2Q641_RAT	Atp6v1a	H(+)-transporting two-sector ATPase	1	YSNSDVIIYVGCGER	YSNSDVIIYVGC(UniMod:4)GER	2	YSNSDVIIYVGC(UniMod:4)GER2	12442	12721.3	11777.7
O08662	O08662	PI4KA_RAT	Pi4ka	Phosphatidylinositol 4-kinase alpha	1	YSNSEESLLSK	YSNSEESLLSK	2	YSNSEESLLSK2	14281.4	11824.4	17927.8
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	YSNSEVVTGSGLDSQK	YSNSEVVTGSGLDSQK	2	YSNSEVVTGSGLDSQK2	35250	36436.8	28827
A0A0G2JT63	A0A0G2JT63	A0A0G2JT63_RAT	Cyfip2	Cytoplasmic FMR1-interacting protein	1	YSNSEVVTGSGLDSQK	YSNSEVVTGSGLDSQK	3	YSNSEVVTGSGLDSQK3	5476.71	3492.04	5148.31
D4A8H8	D4A8H8	D4A8H8_RAT	Cyfip1	Cytoplasmic FMR1-interacting protein	1	YSNSEVVTGSGR	YSNSEVVTGSGR	2	YSNSEVVTGSGR2	201842	167559	131860
A0A0G2K749	A0A0G2K749	A0A0G2K749_RAT	Fry	FRY microtubule binding protein	1	YSNSSGGSYDEDK	YSNSSGGSYDEDK	2	YSNSSGGSYDEDK2	4195.21		11474.7
A0A0G2JZL1	A0A0G2JZL1	A0A0G2JZL1_RAT	AABR07065808.1	Ig-like domain-containing protein	1	YSNYEANYAESVK	YSNYEANYAESVK	2	YSNYEANYAESVK2	5896.29	10986.5	6495.73
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	YSNYEFISDNSISWSAGLHNR	YSNYEFISDNSISWSAGLHNR	3	YSNYEFISDNSISWSAGLHNR3	4218.33	9073.12	7592.4
A0A8I6AH81	A0A8I6AH81	A0A8I6AH81_RAT	Ecpas	Ecm29 proteasome adaptor and scaffold	1	YSPDVLK	YSPDVLK	2	YSPDVLK2	17933.7	12807.5	13553.1
P09117	P09117	ALDOC_RAT	Aldoc	Fructose-bisphosphate aldolase C	1	YSPEEIAMATVTALR	YSPEEIAMATVTALR	3	YSPEEIAMATVTALR3	5334.4	1158.82	6778.11
Q5HZE4	Q5HZE4	MTNA_RAT	Mri1	Methylthioribose-1-phosphate isomerase	1	YSPGSLQILDQLQLPEHCHYETLSSVQQAR	YSPGSLQILDQLQLPEHC(UniMod:4)HYETLSSVQQAR	4	YSPGSLQILDQLQLPEHC(UniMod:4)HYETLSSVQQAR4	6893.37		2964.88
A0A8I6AFV4	A0A8I6AFV4	A0A8I6AFV4_RAT	Cog1	Conserved oligomeric Golgi complex subunit 1	1	YSPILSR	YSPILSR	2	YSPILSR2	25752.9	22290.2	34542.5
P11661	P11661	NU5M_RAT	Mtnd5	NADH-ubiquinone oxidoreductase chain 5	1	YSPLITINENNPNLINPIK	YSPLITINENNPNLINPIK	3	YSPLITINENNPNLINPIK3	2923.24		5311.98
P11661	P11661	NU5M_RAT	Mtnd5	NADH-ubiquinone oxidoreductase chain 5	1	YSPLITINENNPNLINPIKR	YSPLITINENNPNLINPIKR	3	YSPLITINENNPNLINPIKR3	7935.72	11813.3	6852.84
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	YSPLLLENELNAELGLSGASMK	YSPLLLENELNAELGLSGASMK	3	YSPLLLENELNAELGLSGASMK3	570138	801436	701497
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	YSPSEAGLHEMDIR	YSPSEAGLHEMDIR	2	YSPSEAGLHEMDIR2	1.16131e+06	1.02908e+06	1.13211e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	YSPSEAGLHEMDIR	YSPSEAGLHEMDIR	3	YSPSEAGLHEMDIR3	5.16728e+06	5.08333e+06	5.71683e+06
O55006	O55006	ROB1_RAT		Protein RoBo-1	1	YSPSLSTDQK	YSPSLSTDQK	2	YSPSLSTDQK2	10492.1	10727.8	16465.1
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	YSPSTHPSEGLEENYCR	YSPSTHPSEGLEENYC(UniMod:4)R	3	YSPSTHPSEGLEENYC(UniMod:4)R3	1.9778e+06	1.85387e+06	1.85277e+06
P98105	P98105	LYAM2_RAT	Sele	E-selectin	1	YSPSYYWIGIR	YSPSYYWIGIR	2	YSPSYYWIGIR2	32595.5	30808.3	38663.4
B0BNN4	B0BNN4	B0BNN4_RAT	Cfp	Complement factor properdin	1	YSPTVSMVEGQGEK	YSPTVSMVEGQGEK	2	YSPTVSMVEGQGEK2	6834.6	4851.61	2623.3
D3ZXJ5	D3ZXJ5	D3ZXJ5_RAT	Efl1	Elongation factor like GTPase 1	1	YSPVDFLQR	YSPVDFLQR	2	YSPVDFLQR2	20697.7	12570.9	10677.6
Q63481	Q63481	RAB7L_RAT	Rab29	Ras-related protein Rab-7L1	1	YSQDSFSK	YSQDSFSK	2	YSQDSFSK2	46114.2	40193.4	60530.4
A0A0G2K5N0	A0A0G2K5N0	A0A0G2K5N0_RAT	Otud7b	ubiquitinyl hydrolase 1	1	YSQEVMQSLSILR	YSQEVMQSLSILR	2	YSQEVMQSLSILR2	18890.2	20960.6	22041.3
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	YSQFINFPIYVWSSK	YSQFINFPIYVWSSK	2	YSQFINFPIYVWSSK2	479796	701532	635324
Q66HD0	Q66HD0	ENPL_RAT	Hsp90b1	Endoplasmin	1	YSQFINFPIYVWSSK	YSQFINFPIYVWSSK	3	YSQFINFPIYVWSSK3	93516.9	171550	125764
Q63610	Q63610;P04692	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	0	YSQKEDK	YSQKEDK	1	YSQKEDK1	3486.75	923.545	13704.9
Q63610	Q63610;P04692	TPM3_RAT	Tpm3	Tropomyosin alpha-3 chain	0	YSQKEDK	YSQKEDK	2	YSQKEDK2	6378.78	12533.5	11541.6
Q6AYS6	Q6AYS6	SNX17_RAT	Snx17	Sorting nexin-17	1	YSQLLGLHEQLR	YSQLLGLHEQLR	3	YSQLLGLHEQLR3	11918.2	6479.03	7807.58
A0A8I6AEL0	A0A8I6AEL0;F1LUY7	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	0	YSQPLHEEIALHK	YSQPLHEEIALHK	3	YSQPLHEEIALHK3	10981.5	11591.3	9061.18
A0A8I6AEL0	A0A8I6AEL0;F1LUY7	A0A8I6AEL0_RAT	Map3k5	mitogen-activated protein kinase kinase kinase	0	YSQPLHEEIALHK	YSQPLHEEIALHK	4	YSQPLHEEIALHK4	26013	15703	34049.7
F1M7L9	F1M7L9	PKP2_RAT	Pkp2	Plakophilin-2	1	YSQSIYMQNR	YSQSIYMQNR	2	YSQSIYMQNR2	6349.53	7087.4	4582.87
Q641Y0	Q641Y0	OST48_RAT	Ddost	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit	1	YSQTGNYELAVALSR	YSQTGNYELAVALSR	2	YSQTGNYELAVALSR2	16345.8	15351.6	19436.9
Q641Y0	Q641Y0	OST48_RAT	Ddost	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit	1	YSQTGNYELAVALSR	YSQTGNYELAVALSR	3	YSQTGNYELAVALSR3	18995.5	18828.5	17819.2
P62271	D3ZM33;A0A8I6AK40;P62271	RS18_RAT	Rps18	Small ribosomal subunit protein uS13	0	YSQVLANGLDNK	YSQVLANGLDNK	2	YSQVLANGLDNK2	27181.7	28059.1	25941.1
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	YSQYNER	YSQYNER	2	YSQYNER2	132063		123347
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	YSQYNERDEIPHNDIALLK	YSQYNERDEIPHNDIALLK	3	YSQYNERDEIPHNDIALLK3	865995	917638	920054
Q6L711	Q6L711	HABP2_RAT	Habp2	Hyaluronan-binding protein 2	1	YSQYNERDEIPHNDIALLK	YSQYNERDEIPHNDIALLK	4	YSQYNERDEIPHNDIALLK4	1.21381e+06	1.45171e+06	1.46916e+06
D4A0E8	D4A0E8	D4A0E8_RAT	Prmt5	Protein arginine N-methyltransferase 5	1	YSQYQQAIYK	YSQYQQAIYK	2	YSQYQQAIYK2	28594.8	22357.4	27693.5
B0BNN3	B0BNN3	CAH1_RAT	Ca1	Carbonic anhydrase 1	1	YSSAAEAISK	YSSAAEAISK	2	YSSAAEAISK2	13117.4	10151.3	4785.27
Q6AY49	Q6AY49	Q6AY49_RAT	Tusc3	Tumor suppressor candidate 3	1	YSSAFCNK	YSSAFC(UniMod:4)NK	2	YSSAFC(UniMod:4)NK2	6225.16	10051.6	12020.5
O35777	O35777	MAGT1_RAT	Magt1	Magnesium transporter protein 1	1	YSSAFTNR	YSSAFTNR	2	YSSAFTNR2	59487.7	81068.9	69662.7
P14882	P14882	PCCA_RAT	Pcca	Propionyl-CoA carboxylase alpha chain, mitochondrial	1	YSSAGTVEFLVDSQK	YSSAGTVEFLVDSQK	2	YSSAGTVEFLVDSQK2	6898.65	4768.62	5090.89
A0A0G2JZA7	A0A0G2JZA7	A0A0G2JZA7_RAT	Cemip2	hyaluronoglucosaminidase	1	YSSAIGFLMK	YSSAIGFLMK	2	YSSAIGFLMK2	3937.99	5516.33	
Q91XT9	Q91XT9	ASAH2_RAT	Asah2	Neutral ceramidase	1	YSSDTDKEMVVLK	YSSDTDKEMVVLK	3	YSSDTDKEMVVLK3	6584.52		
P57756	P57756	FCN2_RAT	Fcn2	Ficolin-2	1	YSSFQIQGEAEK	YSSFQIQGEAEK	2	YSSFQIQGEAEK2	1260.12	2210.04	
Q9WTS8	Q9WTS8	FCN1_RAT	Fcn1	Ficolin-1	1	YSSFQVSGEQEK	YSSFQVSGEQEK	2	YSSFQVSGEQEK2	109895	94959	110028
F7F288	F7F288	F7F288_RAT	Bcap29	B-cell receptor-associated protein	1	YSSINVVEK	YSSINVVEK	2	YSSINVVEK2	102688	107471	114152
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	YSSIPQMWSR	YSSIPQMWSR	2	YSSIPQMWSR2	27026.6	14790.2	17040.4
B5DF86	B5DF86	B5DF86_RAT	Cog8	Conserved oligomeric Golgi complex subunit 8	1	YSSIPVIQGIVNEVR	YSSIPVIQGIVNEVR	2	YSSIPVIQGIVNEVR2	9312.96	7804.28	7000.24
A0A8I6A1T4	A0A8I6A1T4	A0A8I6A1T4_RAT	Eif4g2	Eukaryotic translation initiation factor 4, gamma 2	1	YSSLYAQLCLR	YSSLYAQLC(UniMod:4)LR	2	YSSLYAQLC(UniMod:4)LR2	7940.44	7426.33	
A0A8I6A829	A0A8I6A829	A0A8I6A829_RAT	Dock8	Dedicator of cytokinesis 8	1	YSSSEIR	YSSSEIR	2	YSSSEIR2	54145.2	55394.7	57804.6
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	YSSSSGGSYEEEK	YSSSSGGSYEEEK	2	YSSSSGGSYEEEK2		23570.1	
P18614	P18614	ITA1_RAT	Itga1	Integrin alpha-1	1	YSSTEEVLVAANK	YSSTEEVLVAANK	2	YSSTEEVLVAANK2	1628.35	1581.49	
O88588	O88588	PACS1_RAT	Pacs1	Phosphofurin acidic cluster sorting protein 1	1	YSSTFLDSAWR	YSSTFLDSAWR	2	YSSTFLDSAWR2	49247.3	47620.4	42400.5
O54922	O54922	EXOC7_RAT	Exoc7	Exocyst complex component 7	1	YSSVPFTK	YSSVPFTK	2	YSSVPFTK2	21453	27142.8	24459.4
A0A8I6AGG9	A0A8I6AGG9	A0A8I6AGG9_RAT	Chchd3	Coiled-coil-helix-coiled-coil-helix domain containing 3	1	YSSVYGASVSDEELK	YSSVYGASVSDEELK	2	YSSVYGASVSDEELK2	97914.8	99338.2	125817
A0A8I6AGG9	A0A8I6AGG9	A0A8I6AGG9_RAT	Chchd3	Coiled-coil-helix-coiled-coil-helix domain containing 3	1	YSSVYGASVSDEELKR	YSSVYGASVSDEELKR	2	YSSVYGASVSDEELKR2			5031.73
A0A8I6AGG9	A0A8I6AGG9	A0A8I6AGG9_RAT	Chchd3	Coiled-coil-helix-coiled-coil-helix domain containing 3	1	YSSVYGASVSDEELKR	YSSVYGASVSDEELKR	3	YSSVYGASVSDEELKR3	18913.1	24728.4	31132.9
O70513	O70513	LG3BP_RAT	Lgals3bp	Galectin-3-binding protein	1	YSSYQNFQTPQHPSFLFK	YSSYQNFQTPQHPSFLFK	3	YSSYQNFQTPQHPSFLFK3	188697	231795	213501
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	YSTDESITSLAEFVVQK	YSTDESITSLAEFVVQK	2	YSTDESITSLAEFVVQK2	7065.82	6156.91	7577.85
A0A8I6AFJ7	A0A8I6AFJ7	A0A8I6AFJ7_RAT	Dnajc13	DnaJ heat shock protein family (Hsp40) member C13	1	YSTDESITSLAEFVVQK	YSTDESITSLAEFVVQK	3	YSTDESITSLAEFVVQK3	4637.72	6078.13	5077.32
P10860	P10860	DHE3_RAT	Glud1	Glutamate dehydrogenase 1, mitochondrial	1	YSTDVSVDEVK	YSTDVSVDEVK	2	YSTDVSVDEVK2	122995	114661	145481
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	YSTHLHLADDCMK	YSTHLHLADDC(UniMod:4)MK	2	YSTHLHLADDC(UniMod:4)MK2	8771.11	6942.89	4515.95
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	YSTHLHLADDCMK	YSTHLHLADDC(UniMod:4)MK	3	YSTHLHLADDC(UniMod:4)MK3	96976.8	96256.2	85441.6
Q62753	Q62753	STXB2_RAT	Stxbp2	Syntaxin-binding protein 2	1	YSTHLHLADDCMK	YSTHLHLADDC(UniMod:4)MK	4	YSTHLHLADDC(UniMod:4)MK4	66253.4	51278.6	69574.8
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	YSTHLHLAEDCMK	YSTHLHLAEDC(UniMod:4)MK	3	YSTHLHLAEDC(UniMod:4)MK3	9032	9583.76	6746.91
P61765	P61765	STXB1_RAT	Stxbp1	Syntaxin-binding protein 1	1	YSTHLHLAEDCMK	YSTHLHLAEDC(UniMod:4)MK	4	YSTHLHLAEDC(UniMod:4)MK4	9094.01	10667	8080.64
D4A678	D4A678	D4A678_RAT	Spta1	Spectrin, alpha, erythrocytic 1	1	YSTIGLAQQWDQLHQLGMR	YSTIGLAQQWDQLHQLGMR	3	YSTIGLAQQWDQLHQLGMR3	22629.6	27607.2	21671.8
Q5FVC7	Q5FVC7	ACAP2_RAT	Acap2	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2	1	YSTLLSPSEQEK	YSTLLSPSEQEK	2	YSTLLSPSEQEK2	13013.5	7274.13	8531.11
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	YSTSLSWTHLLKPLVCLQLPR	YSTSLSWTHLLKPLVC(UniMod:4)LQLPR	3	YSTSLSWTHLLKPLVC(UniMod:4)LQLPR3	15125.2	1342.31	
D4AAH9	D4AAH9	D4AAH9_RAT	Tbc1d23	TBC1 domain family member 23	1	YSTSLSWTHLLKPLVCLQLPR	YSTSLSWTHLLKPLVC(UniMod:4)LQLPR	4	YSTSLSWTHLLKPLVC(UniMod:4)LQLPR4	14540.9	28205.5	30117.1
Q3KR86	Q3KR86	MIC60_RAT	Immt	MICOS complex subunit Mic60 (Fragment)	1	YSTSSSSGVTAGK	YSTSSSSGVTAGK	2	YSTSSSSGVTAGK2		18627.4	30555.7
P61354	A0A8I5ZSW2;D3ZTK5;A0A8I5ZVA1;P61354;M0R7P0	RL27_RAT	Rpl27	Large ribosomal subunit protein eL27	0	YSVDIPLDK	YSVDIPLDK	2	YSVDIPLDK2	45088.6	51402.5	42981.1
A0A0G2K8I5	A0A0G2K8I5	A0A0G2K8I5_RAT	Pcdh19	Protocadherin 19	1	YSVEEEQR	YSVEEEQR	2	YSVEEEQR2	7439.88	7721.84	6476.94
F7FGV7	F7FGV7	F7FGV7_RAT	Psmd6	Proteasome 26S subunit, non-ATPase 6	1	YSVFFQSLAVVEQEMKK	YSVFFQSLAVVEQEMKK	3	YSVFFQSLAVVEQEMKK3	1503.54	3164.43	4241.67
D4A8N1	D4A8N1	D4A8N1_RAT	Dpm1	Dolichol-phosphate mannosyltransferase subunit 1	1	YSVLLPTYNER	YSVLLPTYNER	2	YSVLLPTYNER2		33275.7	25189.5
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	YSVLQQHAEADGVEALDTASHAK	YSVLQQHAEADGVEALDTASHAK	3	YSVLQQHAEADGVEALDTASHAK3	8676.46	11571	5987.13
O54861	O54861	SORT_RAT	Sort1	Sortilin	1	YSVLQQHAEADGVEALDTASHAK	YSVLQQHAEADGVEALDTASHAK	4	YSVLQQHAEADGVEALDTASHAK4	132320	128249	140208
P60123	P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	1	YSVQLLTPANLLAK	YSVQLLTPANLLAK	2	YSVQLLTPANLLAK2	66408.7	71818.5	89303.4
P60123	P60123	RUVB1_RAT	Ruvbl1	RuvB-like 1	1	YSVQLLTPANLLAK	YSVQLLTPANLLAK	3	YSVQLLTPANLLAK3	14871.6	5913.27	13712.6
D3ZRN3	P60711;P63259;A0A8I5Y704;D3ZRN3;P63269;P68035;P62738	D3ZRN3_RAT	Actbl2	Actin, beta-like 2	0	YSVWIGGSILASLSTFQQMWISK	YSVWIGGSILASLSTFQQMWISK	3	YSVWIGGSILASLSTFQQMWISK3	6641.8	13584.8	6182.93
D3ZHQ1	D3ZHQ1	D3ZHQ1_RAT	Dpp8	Dipeptidylpeptidase 8	1	YSWSQLK	YSWSQLK	2	YSWSQLK2	19140.7	21951.7	13228.7
P17105	P17105	IP3KA_RAT	Itpka	Inositol-trisphosphate 3-kinase A	1	YSWVQLAGHTGSFK	YSWVQLAGHTGSFK	3	YSWVQLAGHTGSFK3	2317.92	5053.87	2913.04
G3V7I3	G3V7I3	G3V7I3_RAT	Atp13a1	ATPase 13A1	1	YSYDALEK	YSYDALEK	2	YSYDALEK2	15671.5	20525.2	19959.8
D3ZG78	D3ZG78	D3ZG78_RAT	Zzef1	Zinc finger ZZ-type and EF-hand domain containing 1	1	YSYGHLPTHSITAHPMVTIR	YSYGHLPTHSITAHPMVTIR	4	YSYGHLPTHSITAHPMVTIR4	15780.1	11744.9	11155.6
P29419	P29419	ATP5I_RAT	Atp5me	ATP synthase subunit e, mitochondrial	1	YSYLKPR	YSYLKPR	2	YSYLKPR2	48340.2	45650	31367.2
F1M0U5	F1M0U5	F1M0U5_RAT	Nbas	NBAS subunit of NRZ tethering complex	1	YSYLYDLSR	YSYLYDLSR	2	YSYLYDLSR2	2236.86	12269.1	9305.5
F1LU48	F1LU48	F1LU48_RAT	Ergic1	Endoplasmic reticulum-Golgi intermediate compartment protein	1	YSYQYTVANK	YSYQYTVANK	2	YSYQYTVANK2	25216.9	36293.3	29096.5
Q7TPL3	Q7TPL3	BACD3_RAT	Kctd10	BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3	1	YSYTSNSDDNMLK	YSYTSNSDDNMLK	2	YSYTSNSDDNMLK2			3738.71
Q4V7C7	Q4V7C7	ARP3_RAT	Actr3	Actin-related protein 3	1	YSYVCPDLVK	YSYVC(UniMod:4)PDLVK	2	YSYVC(UniMod:4)PDLVK2	730800	659232	663313
Q7TSP2	Q7TSP2	KIF15_RAT	Kif15	Kinesin-like protein KIF15	1	YTAAVADKEESK	YTAAVADKEESK	3	YTAAVADKEESK3	4130.26	8773.98	
Q499T5	Q499T5	Q499T5_RAT	Capn7	Calpain 7	1	YTAEEIEVLR	YTAEEIEVLR	2	YTAEEIEVLR2	5153.12	7500.67	7261.43
Q6AYY8	Q6AYY8	ACATN_RAT	Slc33a1	Acetyl-coenzyme A transporter 1	1	YTAGPQPLNIFYK	YTAGPQPLNIFYK	2	YTAGPQPLNIFYK2	12465.1	8919.52	3949.2
D3ZZT9	D3ZZT9	D3ZZT9_RAT	Col14a1	Collagen type XIV alpha 1 chain	1	YTAILNQIPSQSSSIR	YTAILNQIPSQSSSIR	2	YTAILNQIPSQSSSIR2	2979.04	2405.01	3992.94
A0A8I5ZQQ3	A0A8I5ZQQ3	A0A8I5ZQQ3_RAT	Pdpr	Pyruvate dehydrogenase phosphatase regulatory subunit	1	YTALNLIGPR	YTALNLIGPR	2	YTALNLIGPR2	8573.34	7211.63	4806.53
A0A8I5YBG5	A0A8I5YBG5	A0A8I5YBG5_RAT	Ubr2	E3 ubiquitin-protein ligase	1	YTALQAFK	YTALQAFK	2	YTALQAFK2	10661.5	10341.8	10240.6
P31399	P31399;A0A8I5ZWF8	ATP5H_RAT	Atp5pd	ATP synthase subunit d, mitochondrial	0	YTALVDAEEK	YTALVDAEEK	2	YTALVDAEEK2	45317.6	68232	69615.7
P31399	P31399	ATP5H_RAT	Atp5pd	ATP synthase subunit d, mitochondrial	1	YTALVDAEEKEDVK	YTALVDAEEKEDVK	2	YTALVDAEEKEDVK2	14478.6	12639.4	16046.6
P31399	P31399	ATP5H_RAT	Atp5pd	ATP synthase subunit d, mitochondrial	1	YTALVDAEEKEDVK	YTALVDAEEKEDVK	3	YTALVDAEEKEDVK3	164094	155643	191042
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	YTALVTLTTQHVK	YTALVTLTTQHVK	2	YTALVTLTTQHVK2	3732.79	1447.03	2969.79
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	YTALVTLTTQHVK	YTALVTLTTQHVK	3	YTALVTLTTQHVK3	18643.7	20828	27335.6
D3ZRB3	D3ZRB3	D3ZRB3_RAT	Rhof	Ras homolog family member F, filopodia associated	1	YTASVTVGNK	YTASVTVGNK	2	YTASVTVGNK2	25770.1	14531.3	24169.9
P08650	P08650	CO5_RAT	C5	Complement C5	1	YTATLLDIYK	YTATLLDIYK	2	YTATLLDIYK2	667909	538208	529127
Q9QYJ2	Q9QYJ2	RASA3_RAT	Rasa3	Ras GTPase-activating protein 3	1	YTAVSSFIFLR	YTAVSSFIFLR	2	YTAVSSFIFLR2	121175	129998	116810
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	YTCDHNTSLSR	YTC(UniMod:4)DHNTSLSR	2	YTC(UniMod:4)DHNTSLSR2	7107.3	6489.31	
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	YTCDHNTSLSR	YTC(UniMod:4)DHNTSLSR	3	YTC(UniMod:4)DHNTSLSR3	37911.8	50604.9	49273.8
D3ZFU9	D3ZFU9	D3ZFU9_RAT	Mylk	Myosin light chain kinase, smooth muscle	1	YTCEASNGSGAR	YTC(UniMod:4)EASNGSGAR	2	YTC(UniMod:4)EASNGSGAR2			12026
Q4G002	Q4G002	Q4G002_RAT	RT1-T24-4	Histocompatibility 2, T region locus 24	1	YTCHVEHEGLPEPLTQR	YTC(UniMod:4)HVEHEGLPEPLTQR	3	YTC(UniMod:4)HVEHEGLPEPLTQR3	18296.1	19960.5	16372.2
Q4G002	Q4G002	Q4G002_RAT	RT1-T24-4	Histocompatibility 2, T region locus 24	1	YTCHVEHEGLPEPLTQR	YTC(UniMod:4)HVEHEGLPEPLTQR	4	YTC(UniMod:4)HVEHEGLPEPLTQR4	47944.9	35212.1	41857.7
Q00918	Q00918	LTBP1_RAT	Ltbp1	Latent-transforming growth factor beta-binding protein 1	1	YTCICYEGYK	YTC(UniMod:4)IC(UniMod:4)YEGYK	2	YTC(UniMod:4)IC(UniMod:4)YEGYK2	437554	559328	471317
D3Z9F7	D3Z9F7	D3Z9F7_RAT	Cr2	Complement C3d receptor 2	1	YTCLPGYR	YTC(UniMod:4)LPGYR	2	YTC(UniMod:4)LPGYR2	132454	128676	120927
A0A0G2K1E1	A0A0G2K1E1	A0A0G2K1E1_RAT	RT1-A1	RT1 class Ia, locus A1	1	YTCLVEHEGLPEPLTQR	YTC(UniMod:4)LVEHEGLPEPLTQR	3	YTC(UniMod:4)LVEHEGLPEPLTQR3	4182.35	6397.89	4220.25
Q5U2N3	Q5U2N3	PITM1_RAT	Pitpnm1	Membrane-associated phosphatidylinositol transfer protein 1	1	YTCPFVEK	YTC(UniMod:4)PFVEK	2	YTC(UniMod:4)PFVEK2	6249.56	6389.68	5113
B1H219	B1H219	B1H219_RAT	Dkk3	Dickkopf WNT signaling pathway inhibitor 3	1	YTCQPCR	YTC(UniMod:4)QPC(UniMod:4)R	2	YTC(UniMod:4)QPC(UniMod:4)R2	637952		475663
P61515	A0A8I6ADZ2;P61515;D4A829;D4A7B1;A0A8I6A398;A0A8I5ZL35;A0A8I6GLT4	RL37A_RAT	Rpl37a	Large ribosomal subunit protein eL43	0	YTCSFCGK	YTC(UniMod:4)SFC(UniMod:4)GK	2	YTC(UniMod:4)SFC(UniMod:4)GK2	10654.6	7702.12	8646.52
Q32Q07	Q32Q07	LRRN1_RAT	Lrrn1	Leucine-rich repeat neuronal protein 1	1	YTCVAQNVQGADTR	YTC(UniMod:4)VAQNVQGADTR	2	YTC(UniMod:4)VAQNVQGADTR2	5343.34	5906.65	5309.36
A0A096MJ11	A0A096MJ11	A0A096MJ11_RAT	Gsdmd	Gasdermin D	1	YTCVNLSIK	YTC(UniMod:4)VNLSIK	2	YTC(UniMod:4)VNLSIK2	25179.3	20812.6	35530.9
Q4V8F3	Q4V8F3	RHBL4_RAT	Rhbdd1	Rhomboid-related protein 4	1	YTDGRPVNYEATYR	YTDGRPVNYEATYR	3	YTDGRPVNYEATYR3	43684.6	42519.5	40677.9
A0A0G2K2V5	A0A0G2K2V5	A0A0G2K2V5_RAT	Exoc1	Exocyst complex component 1	1	YTDHLQSYVIYSLGQPLEK	YTDHLQSYVIYSLGQPLEK	3	YTDHLQSYVIYSLGQPLEK3	26325.5	24280.2	21650.2
Q9EQY6	Q9EQY6	PIGM_RAT	Pigm	GPI mannosyltransferase 1	1	YTDIDYHVFTDAAR	YTDIDYHVFTDAAR	3	YTDIDYHVFTDAAR3	15583	8820.89	16212.5
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	YTDTLGSIQQHFMK	YTDTLGSIQQHFMK	3	YTDTLGSIQQHFMK3	15049.7	13281	14260
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	YTDTLGSIQQHFMKPLQR	YTDTLGSIQQHFMKPLQR	3	YTDTLGSIQQHFMKPLQR3	13698.2	22007.9	17324.1
P54100	P54100	VAV_RAT	Vav1	Proto-oncogene vav	1	YTDTLGSIQQHFMKPLQR	YTDTLGSIQQHFMKPLQR	4	YTDTLGSIQQHFMKPLQR4	14032.8	12664.4	11214.2
A0A0G2JVM2	A0A0G2JVM2	A0A0G2JVM2_RAT	Mia3	MIA SH3 domain ER export factor 3	1	YTEEELRVPADETDFVCFEGGR	YTEEELRVPADETDFVC(UniMod:4)FEGGR	3	YTEEELRVPADETDFVC(UniMod:4)FEGGR3	6612.1		7292.1
P49816	P49816	TSC2_RAT	Tsc2	Tuberin	1	YTEFLTGLGR	YTEFLTGLGR	2	YTEFLTGLGR2	10185.6	7562.45	9155.59
A0A0G2JSI4	A0A0G2JSI4	A0A0G2JSI4_RAT	Adgre5	Adhesion G protein-coupled receptor E5	1	YTEFTSSTTGTGTSQTR	YTEFTSSTTGTGTSQTR	2	YTEFTSSTTGTGTSQTR2	1364.31	606.085	2463.7
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	YTEHSTVGLAQQWDQLDQLGMR	YTEHSTVGLAQQWDQLDQLGMR	3	YTEHSTVGLAQQWDQLDQLGMR3	264070	271300	247177
P16086	P16086	SPTN1_RAT	Sptan1	Spectrin alpha chain, non-erythrocytic 1	1	YTEHSTVGLAQQWDQLDQLGMR	YTEHSTVGLAQQWDQLDQLGMR	4	YTEHSTVGLAQQWDQLDQLGMR4	5442.96	961.352	3063.63
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	YTEITATHFQGVR	YTEITATHFQGVR	3	YTEITATHFQGVR3	6693.94	7355.29	13962.9
Q62824	Q62824	EXOC4_RAT	Exoc4	Exocyst complex component 4	1	YTELEYIHALTLLHR	YTELEYIHALTLLHR	4	YTELEYIHALTLLHR4	19259.5	17442.3	12561.6
Q6EV76	Q6EV76	FUT8_RAT	Fut8	Alpha-(1,6)-fucosyltransferase	1	YTENSLR	YTENSLR	2	YTENSLR2	63362.6	60792	67761.8
Q63362	Q63362	NDUA5_RAT	Ndufa5	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5	1	YTEQITSEK	YTEQITSEK	2	YTEQITSEK2	72506.7	85183.6	75764.9
Q642B0	Q642B0	Q642B0_RAT	Gpc4	Glypican 4	1	YTEQLKPFGDVPR	YTEQLKPFGDVPR	3	YTEQLKPFGDVPR3	34102	45970	32394.3
A0A8I5ZPB5	A0A8I5ZPB5	A0A8I5ZPB5_RAT	Vav3	Vav guanine nucleotide exchange factor 3	1	YTETLESIEK	YTETLESIEK	2	YTETLESIEK2	186757	164866	179449
A0A0G2K860	A0A0G2K860	A0A0G2K860_RAT	Arhgef12	Rho guanine nucleotide exchange factor 12	1	YTEWPPER	YTEWPPER	2	YTEWPPER2	32383.4	38152.5	21281.3
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	YTEYSFR	YTEYSFR	2	YTEYSFR2	113413	81608.1	115017
Q63524	Q63524	TMED2_RAT	Tmed2	Transmembrane emp24 domain-containing protein 2	1	YTFAAHMDGTYK	YTFAAHMDGTYK	2	YTFAAHMDGTYK2	6749.64	9308.84	4819.2
Q63524	Q63524	TMED2_RAT	Tmed2	Transmembrane emp24 domain-containing protein 2	1	YTFAAHMDGTYK	YTFAAHMDGTYK	3	YTFAAHMDGTYK3	100498	98589.3	109098
Q9Z1Z9	Q9Z1Z9	PDLI7_RAT	Pdlim7	PDZ and LIM domain protein 7	1	YTFAPSASLNK	YTFAPSASLNK	2	YTFAPSASLNK2	205550	182899	198893
P49803	P49803;P49801	RGS7_RAT	Rgs7	Regulator of G-protein signaling 7	0	YTFEDAQEHIYK	YTFEDAQEHIYK	3	YTFEDAQEHIYK3	10712.2	10307	7723.61
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	YTFEEIQQETDIPER	YTFEEIQQETDIPER	2	YTFEEIQQETDIPER2	10900.8	9956.48	8504.72
Q02353	Q02353	NDST1_RAT	Ndst1	Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1	1	YTFHEVITAGPDASSK	YTFHEVITAGPDASSK	3	YTFHEVITAGPDASSK3	12266.4	10869.5	4517.51
Q6J2U6	Q6J2U6	RN114_RAT	Rnf114	E3 ubiquitin-protein ligase RNF114	1	YTFPCPYCPEK	YTFPC(UniMod:4)PYC(UniMod:4)PEK	2	YTFPC(UniMod:4)PYC(UniMod:4)PEK2	3931.8		8631.28
Q9WTT6	Q9WTT6	GUAD_RAT	Gda	Guanine deaminase	1	YTFPTEK	YTFPTEK	2	YTFPTEK2	87692.1	63455.8	103014
D3ZZ26	D3ZZ26	D3ZZ26_RAT	Ppp1r3d	Protein phosphatase 1, regulatory subunit 3D	1	YTFSGWR	YTFSGWR	2	YTFSGWR2	560563	502956	557838
A0A8I5ZTL7	A0A8I5ZTL7	A0A8I5ZTL7_RAT	Atp11a	Phospholipid-transporting ATPase	1	YTFWNFIPK	YTFWNFIPK	2	YTFWNFIPK2	21970.9	15366.6	13322.3
P38650	P38650	DYHC1_RAT	Dync1h1	Cytoplasmic dynein 1 heavy chain 1	1	YTGEDFDEDLR	YTGEDFDEDLR	2	YTGEDFDEDLR2	104337	143514	97813.2
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	YTGEGHEDWK	YTGEGHEDWK	2	YTGEGHEDWK2	8329.67	2087.42	10713.1
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	YTGEGHEDWK	YTGEGHEDWK	3	YTGEGHEDWK3	33533	34638.5	69008.7
D4ACA1	D4ACA1	D4ACA1_RAT	Nxpe3	Neurexophilin and PC-esterase domain family, member 3	1	YTGEPWFCFKPK	YTGEPWFC(UniMod:4)FKPK	3	YTGEPWFC(UniMod:4)FKPK3	8731.13	5360.13	16837.2
P16636	P16636	LYOX_RAT	Lox	Protein-lysine 6-oxidase	1	YTGHHAYASGCTISPY	YTGHHAYASGC(UniMod:4)TISPY	2	YTGHHAYASGC(UniMod:4)TISPY2	6511.82	5777.58	5572.72
P16636	P16636	LYOX_RAT	Lox	Protein-lysine 6-oxidase	1	YTGHHAYASGCTISPY	YTGHHAYASGC(UniMod:4)TISPY	3	YTGHHAYASGC(UniMod:4)TISPY3	10769.4	6683.61	12266.6
Q63358	Q63358;Q9Z1N3	MYO9B_RAT	Myo9b	Unconventional myosin-IXb	0	YTGMLETVR	YTGMLETVR	2	YTGMLETVR2	98054.5	86013.6	87126.1
P05544	P09006;A0A0G2JSK1;P05544;P09005;P05545	SPA3L_RAT	Serpina3l	Serine protease inhibitor A3L	0	YTGNASALFILPDQGK	YTGNASALFILPDQGK	2	YTGNASALFILPDQGK2	11532.5	16016.8	10956.3
Q3B7D2	Q3B7D2	SPTC2_RAT	Sptlc2	Serine palmitoyltransferase 2	1	YTGNIIK	YTGNIIK	2	YTGNIIK2	11439.1	18294	12066.8
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	YTGNTYK	YTGNTYK	1	YTGNTYK1	62117.7		187472
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	YTGNTYK	YTGNTYK	2	YTGNTYK2	46407.9	45572.6	45274.1
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	YTGNTYKVGDTYERPK	YTGNTYKVGDTYERPK	4	YTGNTYKVGDTYERPK4	10476.7	3148.42	
F1LP13	F1LP13	F1LP13_RAT	Ptprg	protein-tyrosine-phosphatase	1	YTGSLTTPPCSEIVEWIVFR	YTGSLTTPPC(UniMod:4)SEIVEWIVFR	3	YTGSLTTPPC(UniMod:4)SEIVEWIVFR3	42582	65327.2	44621
D3ZES7	D3ZWP6;D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	0	YTGSPDSLR	YTGSPDSLR	2	YTGSPDSLR2	72740.8	69422.1	86271.1
D4A9Z2	D4A9Z2	D4A9Z2_RAT	Top3b	DNA topoisomerase	1	YTGTFAGQPVHFK	YTGTFAGQPVHFK	3	YTGTFAGQPVHFK3	8042.59	6792	4103.23
Q63184	Q63184	E2AK2_RAT	Eif2ak2	Interferon-induced, double-stranded RNA-activated protein kinase	1	YTGTPQYMSPEQK	YTGTPQYMSPEQK	2	YTGTPQYMSPEQK2	8749.65	7900.53	2891.66
F1LTN6	F1LTN6	F1LTN6_RAT	AABR07060872.1	Ig-like domain-containing protein	1	YTGVPDR	YTGVPDR	2	YTGVPDR2	1.05465e+06	951996	1.07654e+06
Q80ZG1	Q80ZG0;Q80ZG1	RIC8A_RAT	Ric8a	Synembryn-A	0	YTGYGNAAGLLAAR	YTGYGNAAGLLAAR	2	YTGYGNAAGLLAAR2	20406.4	18316.6	28717.1
Q9EQV9	Q9EQV9	CBPB2_RAT	Cpb2	Carboxypeptidase B2	1	YTHGSGSESLYLAPGGSDDWIYDLGIK	YTHGSGSESLYLAPGGSDDWIYDLGIK	3	YTHGSGSESLYLAPGGSDDWIYDLGIK3	36785	25473.3	24367
Q1HCL7	Q1HCL7	NAKD2_RAT	Nadk2	NAD kinase 2, mitochondrial	1	YTHSFPEALQK	YTHSFPEALQK	3	YTHSFPEALQK3			3168.67
Q66X93	Q66X93	SND1_RAT	Snd1	Staphylococcal nuclease domain-containing protein 1	1	YTIENPR	YTIENPR	2	YTIENPR2	266534	194713	217339
P17425	P17425	HMCS1_RAT	Hmgcs1	Hydroxymethylglutaryl-CoA synthase, cytoplasmic	1	YTIGLGQAR	YTIGLGQAR	2	YTIGLGQAR2	24811	24582.6	12542
D4A5T1	D4A5T1	D4A5T1_RAT	Sf3b5	Splicing factor 3B subunit 5	1	YTIHSQLEHLQSK	YTIHSQLEHLQSK	3	YTIHSQLEHLQSK3	10738.5	4618.28	
A0A8I5ZV35	A0A8I5ZV35	A0A8I5ZV35_RAT	Ptprb	protein-tyrosine-phosphatase	1	YTISLMDR	YTISLMDR	2	YTISLMDR2	22160.9	21379.9	13614.6
A0A0G2JWX2	A0A0G2JWX2	A0A0G2JWX2_RAT	Lama2	Laminin subunit alpha 2	1	YTIYFEAR	YTIYFEAR	2	YTIYFEAR2	27597.4	20212.8	32495.6
Q5PPJ6	Q5PPJ6	Q5PPJ6_RAT	Lars1	leucine--tRNA ligase	1	YTIYSPK	YTIYSPK	2	YTIYSPK2	11887.2	12477.2	13269
Q68FP9	Q68FP9	COG6_RAT	Cog6	Conserved oligomeric Golgi complex subunit 6	1	YTLDEFGTAR	YTLDEFGTAR	2	YTLDEFGTAR2	32554.4	20690	36035.4
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	YTLETRPNQEGIDVR	YTLETRPNQEGIDVR	3	YTLETRPNQEGIDVR3	19949.8	26277.5	24417.2
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	YTLFQIFGK	YTLFQIFGK	2	YTLFQIFGK2	2.58311e+06	2.75539e+06	2.61483e+06
P30349	P30349	LKHA4_RAT	Lta4h	Leukotriene A-4 hydrolase	1	YTLGESQGYK	YTLGESQGYK	2	YTLGESQGYK2	12009.5	15812	10183.6
Q6AY17	Q6AY17	AB17B_RAT	Abhd17b	Alpha/beta hydrolase domain-containing protein 17B	1	YTLLFSHGNAVDLGQMSSFYIGLGSR	YTLLFSHGNAVDLGQMSSFYIGLGSR	3	YTLLFSHGNAVDLGQMSSFYIGLGSR3	5189.02	8757.06	3812.64
Q5XI38	Q5XI38	Q5XI38_RAT	Lcp1	Lymphocyte cytosolic protein 1	1	YTLNILEDIGGGQK	YTLNILEDIGGGQK	2	YTLNILEDIGGGQK2	37139.4	26754.8	24085.8
Q75Q40	Q75Q40	TOM40_RAT	Tomm40	Mitochondrial import receptor subunit TOM40 homolog	1	YTLNNWLATVTLGQAGMHATYYHK	YTLNNWLATVTLGQAGMHATYYHK	4	YTLNNWLATVTLGQAGMHATYYHK4	7339.93		7771.98
D4A529	D4A529	D4A529_RAT	She	Src homology 2 domain containing E	1	YTLNQTSAVFDSIPEVVHYYSTAK	YTLNQTSAVFDSIPEVVHYYSTAK	3	YTLNQTSAVFDSIPEVVHYYSTAK3	7575.78	15949.9	15133.5
Q63598	Q63598	PLST_RAT	Pls3	Plastin-3	1	YTLNVMEDLGEGQK	YTLNVMEDLGEGQK	2	YTLNVMEDLGEGQK2	2103.02	7065.52	3559.94
A0A0G2K3W1	A0A0G2K3W1	A0A0G2K3W1_RAT	Vwa8	von Willebrand factor A domain containing 8	1	YTLPNGDTAWR	YTLPNGDTAWR	2	YTLPNGDTAWR2	9552.05	10754.5	10937.9
Q5XHZ8	Q5XHZ8	Q5XHZ8_RAT	Cog3	Conserved oligomeric Golgi complex subunit 3	1	YTLSQQPWAQPAK	YTLSQQPWAQPAK	2	YTLSQQPWAQPAK2	23755.8	39255	28005.5
D3ZXT7	D3ZXT7	D3ZXT7_RAT	Timd4	T-cell immunoglobulin and mucin domain containing 4	1	YTLWGSIR	YTLWGSIR	2	YTLWGSIR2	182022	201058	216855
Q641X3	Q641X3	HEXA_RAT	Hexa	Beta-hexosaminidase subunit alpha	1	YTLYPNNFQFR	YTLYPNNFQFR	2	YTLYPNNFQFR2	33230.4	20041.9	41653.5
D3ZIT4	D3ZIT4	D3ZIT4_RAT	Anapc7	Anaphase promoting complex subunit 7	1	YTMALQQK	YTMALQQK	2	YTMALQQK2	12455.6	14053.1	13172
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	YTMEINTR	YTMEINTR	2	YTMEINTR2	467978	171830	535236
Q5FVC2	Q5FVC2	ARHG2_RAT	Arhgef2	Rho guanine nucleotide exchange factor 2	1	YTNGHLFTTISVSGMTMCYACNK	YTNGHLFTTISVSGMTMC(UniMod:4)YAC(UniMod:4)NK	3	YTNGHLFTTISVSGMTMC(UniMod:4)YAC(UniMod:4)NK3	1052.25		6056.53
D3ZTW9	D3ZTW9	D3ZTW9_RAT	Exog	Exo/endonuclease G	1	YTNHALSYDQAK	YTNHALSYDQAK	3	YTNHALSYDQAK3	7787.42	5404.13	13279.3
P63086	P63086	MK01_RAT	Mapk1	Mitogen-activated protein kinase 1	1	YTNLSYIGEGAYGMVCSAYDNLNK	YTNLSYIGEGAYGMVC(UniMod:4)SAYDNLNK	3	YTNLSYIGEGAYGMVC(UniMod:4)SAYDNLNK3	13364.7	10058.6	7970.53
Q5RKI0	Q5RKI0	WDR1_RAT	Wdr1	WD repeat-containing protein 1	1	YTNLTLR	YTNLTLR	2	YTNLTLR2	883623	700481	1.01315e+06
B5DF74	B5DF74	B5DF74_RAT	Osbpl11	Oxysterol-binding protein	1	YTNLVTGWQYR	YTNLVTGWQYR	2	YTNLVTGWQYR2	22374.7	15015.3	11620.3
P08661	P08661	MBL2_RAT	Mbl2	Mannose-binding protein C	1	YTNWNEGEPNNVGSGENCVVLLTNGK	YTNWNEGEPNNVGSGENC(UniMod:4)VVLLTNGK	3	YTNWNEGEPNNVGSGENC(UniMod:4)VVLLTNGK3	7181.97	4894.75	7510.06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	YTPCGAGSYTIMVLFADQATPTSPIR	YTPC(UniMod:4)GAGSYTIMVLFADQATPTSPIR	3	YTPC(UniMod:4)GAGSYTIMVLFADQATPTSPIR3	1.09494e+06	1.14566e+06	1.25852e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	YTPCGAGSYTIMVLFADQATPTSPIR	YTPC(UniMod:4)GAGSYTIMVLFADQATPTSPIR	4	YTPC(UniMod:4)GAGSYTIMVLFADQATPTSPIR4	10334.4	21827.7	19190.9
D3ZLC3	D3ZLC3	D3ZLC3_RAT	Itprid2	ITPR interacting domain containing 2	1	YTPEEEQELEK	YTPEEEQELEK	2	YTPEEEQELEK2	11967.2	12203.4	12885.4
P58751	P58751	RELN_RAT	Reln	Reelin	1	YTPHMDNQVK	YTPHMDNQVK	2	YTPHMDNQVK2	94316.8	86457.8	79751.4
P58751	P58751	RELN_RAT	Reln	Reelin	1	YTPHMDNQVK	YTPHMDNQVK	3	YTPHMDNQVK3	430996	467016	448037
D4A131	D4A131	D4A131_RAT	Mrpl4	Mitochondrial ribosomal protein L4	1	YTPLYPFR	YTPLYPFR	2	YTPLYPFR2	3073.32		
P05065	P05065	ALDOA_RAT	Aldoa	Fructose-bisphosphate aldolase A	1	YTPSGQSGAAASESLFISNHAY	YTPSGQSGAAASESLFISNHAY	3	YTPSGQSGAAASESLFISNHAY3	31528.3	34484.3	35579.7
A0A0G2JXT8	A0A0G2JXT8	A0A0G2JXT8_RAT	Flnb	Filamin B	1	YTPTQQGNMQVLVTYGGDPIPK	YTPTQQGNMQVLVTYGGDPIPK	3	YTPTQQGNMQVLVTYGGDPIPK3	2967.24	3038.86	
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	YTPVQQGPVGVSVTYGGDHIPK	YTPVQQGPVGVSVTYGGDHIPK	3	YTPVQQGPVGVSVTYGGDHIPK3	3.97776e+06	3.69288e+06	3.96034e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	YTPVQQGPVGVSVTYGGDHIPK	YTPVQQGPVGVSVTYGGDHIPK	4	YTPVQQGPVGVSVTYGGDHIPK4	10782.8	11856.2	8160.97
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	YTQALMAPVYAGYQPYFR	YTQALMAPVYAGYQPYFR	3	YTQALMAPVYAGYQPYFR3	38934.1	55820.9	40843.8
G3V667	G3V667	G3V667_RAT	Itga6	Integrin subunit alpha 6	1	YTQELTLNR	YTQELTLNR	2	YTQELTLNR2	390195	436086	474500
F1M943	F1M943	F1M943_RAT	Armc8	Armadillo repeat-containing protein 8	1	YTQEYICQIFSHCCK	YTQEYIC(UniMod:4)QIFSHC(UniMod:4)C(UniMod:4)K	3	YTQEYIC(UniMod:4)QIFSHC(UniMod:4)C(UniMod:4)K3	761.015	3464.17	
B0BNG0	B0BNG0	EMC2_RAT	Emc2	ER membrane protein complex subunit 2	1	YTQGGLENLELSR	YTQGGLENLELSR	2	YTQGGLENLELSR2	24298.9	29275.8	16930.7
B0BNG0	B0BNG0	EMC2_RAT	Emc2	ER membrane protein complex subunit 2	1	YTQGGLENLELSRK	YTQGGLENLELSRK	3	YTQGGLENLELSRK3	3381.3	7692.45	
P02770	P02770	ALBU_RAT	Alb	Albumin	1	YTQKAPQVSTPTLVEAAR	YTQKAPQVSTPTLVEAAR	3	YTQKAPQVSTPTLVEAAR3	73699.9	72358.6	82763.4
P21708	P21708	MK03_RAT	Mapk3	Mitogen-activated protein kinase 3	1	YTQLQYIGEGAYGMVSSAYDHVR	YTQLQYIGEGAYGMVSSAYDHVR	3	YTQLQYIGEGAYGMVSSAYDHVR3		6457.05	
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	YTQMGTPTSITK	YTQMGTPTSITK	2	YTQMGTPTSITK2	10948.4	16276.9	10275
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	YTQQGFGNLPICMAK	YTQQGFGNLPIC(UniMod:4)MAK	2	YTQQGFGNLPIC(UniMod:4)MAK2	10795	13800.8	11246.3
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	YTQQGFGNLPICMAK	YTQQGFGNLPIC(UniMod:4)MAK	3	YTQQGFGNLPIC(UniMod:4)MAK3	8457.91	3697.57	7682.43
G3V6G7	G3V6G7	G3V6G7_RAT	Pnpt1	polyribonucleotide nucleotidyltransferase	1	YTQQIIQSIQQLVK	YTQQIIQSIQQLVK	2	YTQQIIQSIQQLVK2	6000.82		1287.55
P48004	F1M6I7;P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	0	YTQSNGR	YTQSNGR	2	YTQSNGR2			9383.63
O35567	O35567	PUR9_RAT	Atic	Bifunctional purine biosynthesis protein ATIC	1	YTQSNSVCYAK	YTQSNSVC(UniMod:4)YAK	2	YTQSNSVC(UniMod:4)YAK2	19450.1	20133	19961.9
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	YTQSYSNCHGQHSK	YTQSYSNC(UniMod:4)HGQHSK	2	YTQSYSNC(UniMod:4)HGQHSK2			175402
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	YTQSYSNCHGQHSK	YTQSYSNC(UniMod:4)HGQHSK	3	YTQSYSNC(UniMod:4)HGQHSK3			281713
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	YTQSYSNCHGQHSK	YTQSYSNC(UniMod:4)HGQHSK	4	YTQSYSNC(UniMod:4)HGQHSK4			581877
D4ADE8	D4ADE8;A0A8I6A7A4;D3ZN21	D4ADE8_RAT	Ddx3x	RNA helicase	0	YTRPTPVQK	YTRPTPVQK	2	YTRPTPVQK2	6868.59	7494.53	5852.89
A0A8I5ZMR7	A0A8I5ZMR7	A0A8I5ZMR7_RAT	Vps13c	Vacuolar protein sorting 13 homolog C	1	YTRPWSWNNIK	YTRPWSWNNIK	3	YTRPWSWNNIK3	14286.8	21094	
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	YTSCDTGFK	YTSC(UniMod:4)DTGFK	2	YTSC(UniMod:4)DTGFK2	105562	112503	97193.7
D3ZMY7	D3ZMY7	5NTC_RAT	Nt5c2	Cytosolic purine 5'-nucleotidase	1	YTSCDTGFKDGDLFMSYR	YTSC(UniMod:4)DTGFKDGDLFMSYR	3	YTSC(UniMod:4)DTGFKDGDLFMSYR3	57372.1	72844.3	70520.5
F1LZB0	F1LZB0	F1LZB0_RAT	R3hcc1	R3H domain and coiled-coil containing 1	1	YTSHQGAAAGPR	YTSHQGAAAGPR	3	YTSHQGAAAGPR3			1915.68
G3V8E2	G3V8E2	G3V8E2_RAT	Strip1	Striatin interacting protein 1	1	YTSIAEVQAQMEEEYLR	YTSIAEVQAQMEEEYLR	3	YTSIAEVQAQMEEEYLR3	10150.1	10941.6	6995.61
Q68FW9	Q68FW9	CSN3_RAT	Cops3	COP9 signalosome complex subunit 3	1	YTSQIVGR	YTSQIVGR	2	YTSQIVGR2	79207.7	90953	85050.6
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	YTTEIIK	YTTEIIK	1	YTTEIIK1	49017.5	32765	38394.2
B5DEH7	B5DEH7	B5DEH7_RAT	C1r	C1r protein	1	YTTEIIK	YTTEIIK	2	YTTEIIK2	1.86853e+06	1.41272e+06	1.38119e+06
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	YTTLHSK	YTTLHSK	2	YTTLHSK2			16726.1
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	YTTLIAK	YTTLIAK	1	YTTLIAK1	4037.37	1070.9	6139.56
Q2LAP6	Q2LAP6	TES_RAT	Tes	Testin	1	YTTLIAK	YTTLIAK	2	YTTLIAK2	206704	200234	198304
P0C1X8	A0A8I6GK59;P0C1X8	AAK1_RAT	Aak1	AP2-associated protein kinase 1	0	YTTLSYR	YTTLSYR	2	YTTLSYR2	113679	100166	112307
F1M9V7	F1M9V7	F1M9V7_RAT	Npepps	Aminopeptidase	1	YTTPAGEVR	YTTPAGEVR	2	YTTPAGEVR2	27118.7	23582.5	17524.5
Q63803	Q63803	GNAS1_RAT	Gnas	Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas	1	YTTPEDATPEPGEDPR	YTTPEDATPEPGEDPR	2	YTTPEDATPEPGEDPR2	95106.1	78241.5	85562.3
Q63803	Q63803	GNAS1_RAT	Gnas	Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas	1	YTTPEDATPEPGEDPR	YTTPEDATPEPGEDPR	3	YTTPEDATPEPGEDPR3	9574.71	3127.5	8200.79
Q2TL32	Q2TL32	UBR4_RAT	Ubr4	E3 ubiquitin-protein ligase UBR4	1	YTTTQQVVK	YTTTQQVVK	2	YTTTQQVVK2	32721.7	52801.8	47795.6
P18292	P18292	THRB_RAT	F2	Prothrombin	1	YTVCDSVR	YTVC(UniMod:4)DSVR	2	YTVC(UniMod:4)DSVR2	695277	755680	765428
P18292	P18292	THRB_RAT	F2	Prothrombin	1	YTVCDSVRKPR	YTVC(UniMod:4)DSVRKPR	3	YTVC(UniMod:4)DSVRKPR3	318273	381666	484116
P26453	P26453	BASI_RAT	Bsg	Basigin	1	YTVDADDR	YTVDADDR	2	YTVDADDR2	367990	329217	376060
P26453	P26453	BASI_RAT	Bsg	Basigin	1	YTVDADDRSGEYSCIFLPEPVGR	YTVDADDRSGEYSC(UniMod:4)IFLPEPVGR	3	YTVDADDRSGEYSC(UniMod:4)IFLPEPVGR3	15665.5	19846.4	13648.8
Q8K3L6	Q8K3L6	GIMA5_RAT	Gimap5	GTPase IMAP family member 5	1	YTVEDAMAVR	YTVEDAMAVR	2	YTVEDAMAVR2	10549	6244.56	
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	YTVFHDLIR	YTVFHDLIR	2	YTVFHDLIR2	10918	13622.7	16647.4
P97874	P97874	GAK_RAT	Gak	Cyclin-G-associated kinase	1	YTVFHDLIR	YTVFHDLIR	3	YTVFHDLIR3	52314.2	92820.1	64032.6
A0A0G2K975	A0A0G2K975	A0A0G2K975_RAT	Cfhr4	Similar to complement factor H-related protein	1	YTVGDLLK	YTVGDLLK	2	YTVGDLLK2	27483.1	35517.2	34537.7
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	YTVGGSETFDSLTDLVEHFK	YTVGGSETFDSLTDLVEHFK	3	YTVGGSETFDSLTDLVEHFK3	16782.9	16341.4	15263.6
P81718	P81718	PTN6_RAT	Ptpn6	Tyrosine-protein phosphatase non-receptor type 6	1	YTVGGSETFDSLTDLVEHFKK	YTVGGSETFDSLTDLVEHFKK	4	YTVGGSETFDSLTDLVEHFKK4	17032.3	11003.5	14315.8
M0RCP2	M0RCP2	M0RCP2_RAT	Sh3pxd2b	SH3 and PX domains 2B	1	YTVIYPYTAR	YTVIYPYTAR	2	YTVIYPYTAR2	13571	15211.8	12122.9
Q63406	Q63406	MCF2L_RAT	Mcf2l	Guanine nucleotide exchange factor DBS	1	YTVLMDGEK	YTVLMDGEK	2	YTVLMDGEK2	25698.2	23353.3	14308.2
B2RYP8	B2RYP8	B2RYP8_RAT	Tubgcp2	Gamma-tubulin complex component	1	YTVLPQQIPSFLQK	YTVLPQQIPSFLQK	2	YTVLPQQIPSFLQK2	17212.1	11048.5	14406.9
F1LQ00	F1LQ00	F1LQ00_RAT	Col5a2	Collagen type V alpha 2 chain	1	YTVLQDTCSK	YTVLQDTC(UniMod:4)SK	2	YTVLQDTC(UniMod:4)SK2	24791.4	14892.6	19769.3
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	YTVNQCK	YTVNQC(UniMod:4)K	1	YTVNQC(UniMod:4)K1	12888.4	13213.7	14540.7
P13635	P13635	CERU_RAT	Cp	Ceruloplasmin	1	YTVNQCK	YTVNQC(UniMod:4)K	2	YTVNQC(UniMod:4)K2	1.93823e+06	488325	697302
P63245	P63245	RACK1_RAT	Rack1	Small ribosomal subunit protein RACK1	1	YTVQDESHSEWVSCVR	YTVQDESHSEWVSC(UniMod:4)VR	3	YTVQDESHSEWVSC(UniMod:4)VR3	9000.42	16623.8	13379.3
D3ZT01	D3ZT01	D3ZT01_RAT	Cog2	Conserved oligomeric Golgi complex subunit 2	1	YTVSMDFVR	YTVSMDFVR	2	YTVSMDFVR2	23802.3	27698.2	28626.9
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	YTVSVFAK	YTVSVFAK	2	YTVSVFAK2	95413.8	92024.5	93176.5
Q64165	Q64165	Q64165_RAT	Gcnt1	Glucosaminyl (N-acetyl) transferase 1	1	YTVVDGK	YTVVDGK	2	YTVVDGK2	25408.9	18369.7	24388.4
D3ZAZ0	D3ZAZ0	D3ZAZ0_RAT	Eif3m	Eukaryotic translation initiation factor 3 subunit M	1	YTVYCSLIK	YTVYC(UniMod:4)SLIK	2	YTVYC(UniMod:4)SLIK2	93684.1	109526	116903
D4AEH9	D4AEH9	D4AEH9_RAT	Agl	Glycogen debranching enzyme	1	YTWDDVGQLVEK	YTWDDVGQLVEK	2	YTWDDVGQLVEK2	14844.6	9893.83	9897.74
E9PTA5	E9PTA5	E9PTA5_RAT	Pign	GPI ethanolamine phosphate transferase 1	1	YTWSWGSPDILPMFAK	YTWSWGSPDILPMFAK	2	YTWSWGSPDILPMFAK2	10195.6	12577.3	7216.6
A0A0G2K012	A0A0G2K012	A0A0G2K012_RAT	Ubxn6	UBX domain protein 6	1	YTYALLR	YTYALLR	2	YTYALLR2	8544.14		
Q9WU70	Q9WU70	STXB5_RAT	Stxbp5	Syntaxin-binding protein 5	1	YTYDEAIHSVAWHHEGK	YTYDEAIHSVAWHHEGK	4	YTYDEAIHSVAWHHEGK4	28200	24926	20547.9
A0A8I6GK94	A0A8I6GK94	A0A8I6GK94_RAT	Ptprj	protein-tyrosine-phosphatase	1	YTYEDFKK	YTYEDFKK	2	YTYEDFKK2	86750.2	83292.6	87492.5
A0A8I6AH39	A0A8I6AH39	A0A8I6AH39_RAT	Pck2	phosphoenolpyruvate carboxykinase (GTP)	1	YVAAAFPSACGK	YVAAAFPSAC(UniMod:4)GK	2	YVAAAFPSAC(UniMod:4)GK2	122363	152139	148345
Q9Z2Z8	Q9Z2Z8	DHCR7_RAT	Dhcr7	7-dehydrocholesterol reductase	1	YVAAVPYR	YVAAVPYR	2	YVAAVPYR2	106546	110317	115227
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	YVAEFLEWAK	YVAEFLEWAK	2	YVAEFLEWAK2	15519.9	15555.2	21822.1
Q7TT49	Q7TT49	MRCKB_RAT	Cdc42bpb	Serine/threonine-protein kinase MRCK beta	1	YVAEFLEWAKPFTQLVK	YVAEFLEWAKPFTQLVK	3	YVAEFLEWAKPFTQLVK3	23471.2	31221.9	21705.8
P48004	A0A8I6A1Z9;P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	0	YVAEIEK	YVAEIEK	1	YVAEIEK1	14576.7	18545.3	20627.2
P48004	A0A8I6A1Z9;P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	0	YVAEIEK	YVAEIEK	2	YVAEIEK2	1.10509e+06	1.09384e+06	1.24047e+06
P48004	A0A8I6A1Z9;P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	0	YVAEIEKEK	YVAEIEKEK	2	YVAEIEKEK2	44679.5	48598.8	59541
P48004	A0A8I6A1Z9;P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	0	YVAEIEKEKEENEK	YVAEIEKEKEENEK	2	YVAEIEKEKEENEK2	11538.8	15846	18759.7
P48004	A0A8I6A1Z9;P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	0	YVAEIEKEKEENEK	YVAEIEKEKEENEK	3	YVAEIEKEKEENEK3	2.12563e+06	1.75615e+06	2.20577e+06
P48004	A0A8I6A1Z9;P48004	PSA7_RAT	Psma7	Proteasome subunit alpha type-7	0	YVAEIEKEKEENEK	YVAEIEKEKEENEK	4	YVAEIEKEKEENEK4	338784	339058	390824
A0A8I5Y697	A0A8I5Y697	A0A8I5Y697_RAT	Ap1g1	AP-1 complex subunit gamma	1	YVALTSLLK	YVALTSLLK	2	YVALTSLLK2	131898	144580	122690
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	YVALVQEK	YVALVQEK	1	YVALVQEK1	1400.68		5023.16
P23514	P23514	COPB_RAT	Copb1	Coatomer subunit beta	1	YVALVQEK	YVALVQEK	2	YVALVQEK2	268362	266322	256012
F7EPH4	F7EPH4	F7EPH4_RAT	Ppa1	inorganic diphosphatase	1	YVANLFPYK	YVANLFPYK	2	YVANLFPYK2	34715.2	28071.4	17741.1
A0A8I5ZMM2	A0A8I5ZMM2	A0A8I5ZMM2_RAT	Cad	CAD protein	1	YVAPPSLR	YVAPPSLR	2	YVAPPSLR2	37729.8	37215.9	51942.6
D4ADT7	D4ADT7	D4ADT7_RAT	Nod1	Nucleotide-binding oligomerization domain containing 1	1	YVAQILDECR	YVAQILDEC(UniMod:4)R	2	YVAQILDEC(UniMod:4)R2	11056.1	11810.3	5649.79
P40190	P40190	IL6RB_RAT	Il6st	Interleukin-6 receptor subunit beta	1	YVASLAAR	YVASLAAR	2	YVASLAAR2	15324.7		13627.3
P02401	P02401;D4A4D5;D3ZN03	RLA2_RAT	Rplp2	Large ribosomal subunit protein P2	0	YVASYLLAALGGNSNPSAK	YVASYLLAALGGNSNPSAK	2	YVASYLLAALGGNSNPSAK2	26154.7	17372.9	17220.1
P02401	P02401;D4A4D5;D3ZN03	RLA2_RAT	Rplp2	Large ribosomal subunit protein P2	0	YVASYLLAALGGNSNPSAK	YVASYLLAALGGNSNPSAK	3	YVASYLLAALGGNSNPSAK3	63452.5	35787.3	59757.8
P62828	P62828	RAN_RAT	Ran	GTP-binding nuclear protein Ran	1	YVATLGVEVHPLVFHTNR	YVATLGVEVHPLVFHTNR	3	YVATLGVEVHPLVFHTNR3	42044.8	17433.9	21496.7
P62828	P62828	RAN_RAT	Ran	GTP-binding nuclear protein Ran	1	YVATLGVEVHPLVFHTNR	YVATLGVEVHPLVFHTNR	4	YVATLGVEVHPLVFHTNR4	100687	29307	38783.7
G3V828	G3V828	G3V828_RAT	Cnpy3	Canopy FGF signaling regulator 3	1	YVAVELK	YVAVELK	2	YVAVELK2	17854.5	23109.2	15022.4
Q63372	Q63372	NRX1A_RAT	Nrxn1	Neurexin-1	1	YVCDCSGTGYLGR	YVC(UniMod:4)DC(UniMod:4)SGTGYLGR	2	YVC(UniMod:4)DC(UniMod:4)SGTGYLGR2	8273.6	7331.67	9790.52
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	YVCEADGFWTSSK	YVC(UniMod:4)EADGFWTSSK	2	YVC(UniMod:4)EADGFWTSSK2	643703	584156	612921
Q9JJS8	Q9JJS8	MASP2_RAT	Masp2	Mannan-binding lectin serine protease 2	1	YVCEADGFWTSSK	YVC(UniMod:4)EADGFWTSSK	3	YVC(UniMod:4)EADGFWTSSK3	7035.51	5088.81	16225
Q63369	Q63369	NFKB1_RAT	Nfkb1	Nuclear factor NF-kappa-B p105 subunit	1	YVCEGPSHGGLPGASSEK	YVC(UniMod:4)EGPSHGGLPGASSEK	3	YVC(UniMod:4)EGPSHGGLPGASSEK3	29263.9	12839.7	21987.4
A0A1W2Q6N1	A0A1W2Q6N1	A0A1W2Q6N1_RAT	Mpl	MPL proto-oncogene, thrombopoietin receptor	1	YVCQFPALDEVR	YVC(UniMod:4)QFPALDEVR	2	YVC(UniMod:4)QFPALDEVR2	156896	161684	132246
A0A0G2KAH7	A0A0G2KAH7	A0A0G2KAH7_RAT	Ext2	Exostosin glycosyltransferase 2	1	YVDDAGVPVSSAISR	YVDDAGVPVSSAISR	2	YVDDAGVPVSSAISR2	4667.21		4051.54
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	YVDGDLCPDK	YVDGDLC(UniMod:4)PDK	2	YVDGDLC(UniMod:4)PDK2	49705.5	37011	24467.2
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	YVDGDLCPDKIR	YVDGDLC(UniMod:4)PDKIR	3	YVDGDLC(UniMod:4)PDKIR3	16260.3	19271.4	15418.6
P0C548	P0C548	PLPL2_RAT	Pnpla2	Patatin-like phospholipase domain-containing protein 2	1	YVDGGISDNLPLYELK	YVDGGISDNLPLYELK	2	YVDGGISDNLPLYELK2	7304.97	4819.64	
P38983	A0A8I5ZZE2;P38983	RSSA_RAT	Rpsa	Small ribosomal subunit protein uS2	0	YVDIAIPCNNK	YVDIAIPC(UniMod:4)NNK	2	YVDIAIPC(UniMod:4)NNK2	166198	126902	129063
P04157	P04157	PTPRC_RAT	Ptprc	Receptor-type tyrosine-protein phosphatase C	1	YVDILPYDYNR	YVDILPYDYNR	2	YVDILPYDYNR2	63089.8	55936.9	67817.5
D3ZVQ0	D3ZVQ0	D3ZVQ0_RAT	Usp5	Ubiquitin carboxyl-terminal hydrolase	1	YVDKLEK	YVDKLEK	2	YVDKLEK2	29092	23398.4	16110.3
Q5M936	Q5M936	TOR3A_RAT	Tor3a	Torsin-3A	1	YVDLYKEDLQR	YVDLYKEDLQR	2	YVDLYKEDLQR2	1457.84		
Q5M936	Q5M936	TOR3A_RAT	Tor3a	Torsin-3A	1	YVDLYKEDLQR	YVDLYKEDLQR	3	YVDLYKEDLQR3	36510.1	54399.6	30103.6
Q06647	Q06647	ATPO_RAT	Atp5po	ATP synthase subunit O, mitochondrial	1	YVDMSAK	YVDMSAK	1	YVDMSAK1	7732.96	4002.06	7640.09
Q06647	Q06647	ATPO_RAT	Atp5po	ATP synthase subunit O, mitochondrial	1	YVDMSAK	YVDMSAK	2	YVDMSAK2	977253	913991	978968
Q2IBC5	Q2IBC5	CAV2_RAT	Cav2	Caveolin-2	1	YVDSSQDRDPHQLNSHLK	YVDSSQDRDPHQLNSHLK	4	YVDSSQDRDPHQLNSHLK4	16834.9	21110.2	23371.1
A0A0G2K583	A0A0G2K583	A0A0G2K583_RAT	Mtap	S-methyl-5'-thioadenosine phosphorylase	1	YVDTPFGKPSDALILGK	YVDTPFGKPSDALILGK	3	YVDTPFGKPSDALILGK3	21533.6	15288.2	12743.3
A0A8I5ZTA3	A0A8I5ZTA3	A0A8I5ZTA3_RAT	Sec16a	Protein transport protein sec16	1	YVDVLNPSGTQR	YVDVLNPSGTQR	2	YVDVLNPSGTQR2	15820.3	13301.9	28676.3
A0A0G2K4I9	A0A0G2K4I9	A0A0G2K4I9_RAT	F11	Coagulation factor XI	1	YVDWILEK	YVDWILEK	2	YVDWILEK2	52521.7	49568.7	40929.9
P15684	P15684	AMPN_RAT	Anpep	Aminopeptidase N	1	YVEAVSPNR	YVEAVSPNR	2	YVEAVSPNR2	14995.1	15344	13036.3
Q8CFN2	Q8CFN2	CDC42_RAT	Cdc42	Cell division control protein 42 homolog	1	YVECSALTQK	YVEC(UniMod:4)SALTQK	2	YVEC(UniMod:4)SALTQK2	1.04752e+06	878998	924997
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	YVEEQAVK	YVEEQAVK	1	YVEEQAVK1	5057.9	4270.75	6286.45
A0A8I6ATZ0	A0A8I6ATZ0	A0A8I6ATZ0_RAT	Cfhr2	Complement factor H-related 2	1	YVEEQAVK	YVEEQAVK	2	YVEEQAVK2	969817	786605	796215
A0A8J8YNE4	A0A8J8YNE4	A0A8J8YNE4_RAT	Apool	MICOS complex subunit	1	YVEEQPGYLQR	YVEEQPGYLQR	2	YVEEQPGYLQR2	64383.8	56665.2	54984.8
G3V9I7	G3V9I7	G3V9I7_RAT	Adck5	AarF domain containing kinase 5	1	YVEIMSACHQR	YVEIMSAC(UniMod:4)HQR	3	YVEIMSAC(UniMod:4)HQR3		3112.93	
A0A8I5Y224	A0A8I5Y224	A0A8I5Y224_RAT	Adam9	ADAM metallopeptidase domain 9	1	YVELFIVVDKER	YVELFIVVDKER	3	YVELFIVVDKER3	4818.14		8309.37
D3ZD11	D3ZD11	D3ZD11_RAT	Spcs2	Signal peptidase complex subunit 2	1	YVENFGLIDGR	YVENFGLIDGR	2	YVENFGLIDGR2	49997.4	42797.4	50085.1
P05197	P05197	EF2_RAT	Eef2	Elongation factor 2	1	YVEPIEDVPCGNIVGLVGVDQFLVK	YVEPIEDVPC(UniMod:4)GNIVGLVGVDQFLVK	3	YVEPIEDVPC(UniMod:4)GNIVGLVGVDQFLVK3	15145.2	14695.3	12387.7
Q9JJ31	Q9JJ31	CUL5_RAT	Cul5	Cullin-5	1	YVEQLLTLFNR	YVEQLLTLFNR	2	YVEQLLTLFNR2	7860.85		
A0A8I6A7U0	A0A8I6A7U0	A0A8I6A7U0_RAT	Fkbp15	peptidylprolyl isomerase	1	YVEQSNLMMEK	YVEQSNLMMEK	2	YVEQSNLMMEK2	7952.42	14781.1	6759.97
A0A8I6AKP6	A0A8I6AKP6	A0A8I6AKP6_RAT	Rnf213	Ring finger protein 213	1	YVESLLTQLGR	YVESLLTQLGR	2	YVESLLTQLGR2			3620.37
P50393	P50393	PA24A_RAT	Pla2g4a	Cytosolic phospholipase A2	1	YVESLWK	YVESLWK	2	YVESLWK2	88938.6	82909.4	100014
A0A1W2Q5Z7	A0A1W2Q5Z7	A0A1W2Q5Z7_RAT	St3gal1	ST3 beta-galactoside alpha-2,3-sialyltransferase 1	1	YVFDNWLQGHGR	YVFDNWLQGHGR	3	YVFDNWLQGHGR3	7732.15		5520.5
D3ZRI9	D3ZRI9	D3ZRI9_RAT	Gan	Gigaxonin	1	YVFEAVIR	YVFEAVIR	2	YVFEAVIR2	26810.2	17153.8	15190.5
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	YVFFIFNQQDK	YVFFIFNQQDK	2	YVFFIFNQQDK2	22389	9062.95	19319.8
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	YVFFIFNQQDKHPAK	YVFFIFNQQDKHPAK	3	YVFFIFNQQDKHPAK3	13598.1	27995.5	19015.4
A0A0G2K2Y9	A0A0G2K2Y9	A0A0G2K2Y9_RAT	Plxnb2	Plexin B2	1	YVFFIFNQQDKHPAK	YVFFIFNQQDKHPAK	4	YVFFIFNQQDKHPAK4	30383.3	57224.2	25027.2
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	YVFFLDPCNLDLINR	YVFFLDPC(UniMod:4)NLDLINR	2	YVFFLDPC(UniMod:4)NLDLINR2	98556.4	100905	102777
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	YVFFLDPCNLDLINR	YVFFLDPC(UniMod:4)NLDLINR	3	YVFFLDPC(UniMod:4)NLDLINR3	13852	8858.79	10655
Q8VII6	Q8VII6	CTL1_RAT	Slc44a1	Choline transporter-like protein 1	1	YVFFLDPCNLDLINRK	YVFFLDPC(UniMod:4)NLDLINRK	3	YVFFLDPC(UniMod:4)NLDLINRK3	87605.8	105571	95093.8
Q6P6T1	Q6P6T1	C1S_RAT	C1s	Complement C1s subcomponent	1	YVFKDVVK	YVFKDVVK	2	YVFKDVVK2	117634	133059	144476
B2RYF7	B2RYF7	WASH1_RAT	Washc1	WASH complex subunit 1	1	YVFLDPLAGAVTK	YVFLDPLAGAVTK	2	YVFLDPLAGAVTK2	34093.2	40808.3	32240.7
Q5U2Y0	Q5U2Y0	WIPI4_RAT	Wdr45	WD repeat domain phosphoinositide-interacting protein 4	1	YVFTPDGNCNR	YVFTPDGNC(UniMod:4)NR	2	YVFTPDGNC(UniMod:4)NR2	15202.7	3992.29	12714.6
D4AE56	D4AE56	D4AE56_RAT	Ptges2	Prostaglandin E synthase 2	1	YVGAAAMYFISK	YVGAAAMYFISK	2	YVGAAAMYFISK2	6200.04	5240.09	8489.94
A0A8I6A1D9	A0A8I6A1D9	A0A8I6A1D9_RAT	Use1	Vesicle transport protein USE1	1	YVGALEDMLQALK	YVGALEDMLQALK	2	YVGALEDMLQALK2	8956.47	7346.6	16451.2
D3ZMN5	D3ZMN5	D3ZMN5_RAT	Snx29	Sorting nexin 29	1	YVGAVQMLK	YVGAVQMLK	2	YVGAVQMLK2	37153.5	29792.6	30770.7
Q68FP9	Q68FP9	COG6_RAT	Cog6	Conserved oligomeric Golgi complex subunit 6	1	YVGDMLAWLHQATASEK	YVGDMLAWLHQATASEK	3	YVGDMLAWLHQATASEK3	19714.5	14936.4	6509.47
Q9QUL6	Q9QUL6	NSF_RAT	Nsf	Vesicle-fusing ATPase	1	YVGESEANIR	YVGESEANIR	2	YVGESEANIR2	63080.1	74304.6	93317.2
O55156	O55156	CLIP2_RAT	Clip2	CAP-Gly domain-containing linker protein 2	1	YVGETDFAK	YVGETDFAK	2	YVGETDFAK2	316090	360581	293240
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	YVGEVFNIVSQQSTAR	YVGEVFNIVSQQSTAR	2	YVGEVFNIVSQQSTAR2		8356.34	2466.58
A0A8I5ZU67	A0A8I5ZU67	A0A8I5ZU67_RAT	Dmxl1	Dmx-like 1	1	YVGEVFNIVSQQSTAR	YVGEVFNIVSQQSTAR	3	YVGEVFNIVSQQSTAR3		4465.61	4682.66
Q9R085	Q9R085	UBP15_RAT	Usp15	Ubiquitin carboxyl-terminal hydrolase 15	1	YVGFDSWDK	YVGFDSWDK	2	YVGFDSWDK2	104047	109031	124042
P13264	P13264	GLSK_RAT	Gls	Glutaminase kidney isoform, mitochondrial	1	YVGKEPSGLR	YVGKEPSGLR	2	YVGKEPSGLR2	2247.43	4123.37	
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	YVGNMHGNEVLGR	YVGNMHGNEVLGR	2	YVGNMHGNEVLGR2	77331.4	55356.2	48573.2
Q9EQV8	Q9EQV8	CBPN_RAT	Cpn1	Carboxypeptidase N catalytic chain	1	YVGNMHGNEVLGR	YVGNMHGNEVLGR	3	YVGNMHGNEVLGR3	3.59099e+06	2.82788e+06	2.44283e+06
Q5FVQ8	Q5FVQ8	NLRX1_RAT	Nlrx1	NLR family member X1	1	YVGRYGEICGFSDTNLQK	YVGRYGEIC(UniMod:4)GFSDTNLQK	3	YVGRYGEIC(UniMod:4)GFSDTNLQK3	3224.47		
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	YVGSDMK	YVGSDMK	1	YVGSDMK1	7667.49	6485.02	6362.79
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	YVGSDMK	YVGSDMK	2	YVGSDMK2	220558	370619	271366
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	YVGSQLASTSEVLK	YVGSQLASTSEVLK	2	YVGSQLASTSEVLK2	42287.2	42842.3	3.17859e+06
Q62935	Q62935	VWF_RAT	Vwf	von Willebrand factor (Fragment)	1	YVGSQLASTSEVLK	YVGSQLASTSEVLK	3	YVGSQLASTSEVLK3	107944	116456	112866
A0A8I5Y9G0	A0A8I5Y9G0	A0A8I5Y9G0_RAT	Clint1	Clathrin interactor 1	1	YVGVSSDSVGGFR	YVGVSSDSVGGFR	2	YVGVSSDSVGGFR2	222657	209305	227238
Q63483	Q63483	Q63483_RAT	Rab38	Ras-related protein Rab	1	YVHQNFSSHYR	YVHQNFSSHYR	3	YVHQNFSSHYR3	20075	11969.7	17996.2
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	YVHYFSGLLSGSIK	YVHYFSGLLSGSIK	3	YVHYFSGLLSGSIK3	5594.73	6954.28	8462.45
P08934	P08932;A0A0G2KA54;P08934	KNG1_RAT	Kng1	Kininogen-1	0	YVIEFIAR	YVIEFIAR	2	YVIEFIAR2	949255	839668	470169
P08934	P08934	KNG1_RAT	Kng1	Kininogen-1	1	YVIEFIARETK	YVIEFIARETK	3	YVIEFIARETK3	4265.93	1617.06	2861.58
F1M171	F1M171;A0A8I5YBG6	F1M171_RAT	Leg1	Similar to RIKEN cDNA 2310057J18	0	YVINPWVLTDR	YVINPWVLTDR	2	YVINPWVLTDR2	255404	284910	255952
Q9EPV5	Q9EPV5	APAF_RAT	Apaf1	Apoptotic protease-activating factor 1	1	YVIPVESGLGK	YVIPVESGLGK	2	YVIPVESGLGK2	36702.4	27962	29895.6
F1LSM0	F1LSM0	F1LSM0_RAT	Usp24	ubiquitinyl hydrolase 1	1	YVITIEDFYSVPR	YVITIEDFYSVPR	2	YVITIEDFYSVPR2	14584.4	10387.1	11641.9
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	YVIVSSK	YVIVSSK	1	YVIVSSK1	3620.22	1494.35	2956.33
Q62868	Q62868	ROCK2_RAT	Rock2	Rho-associated protein kinase 2	1	YVIVSSK	YVIVSSK	2	YVIVSSK2	121648	97089.2	127489
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	YVIWSADMSHVALLAK	YVIWSADMSHVALLAK	2	YVIWSADMSHVALLAK2	5326.39	5794.22	4767.39
A0A8I5ZNF1	A0A8I5ZNF1	A0A8I5ZNF1_RAT	Copa	Coatomer subunit alpha	1	YVIWSADMSHVALLAK	YVIWSADMSHVALLAK	3	YVIWSADMSHVALLAK3	24638.7	28757.1	30163
P12749	P12749;M0RE23;D4A1Z2	RL26_RAT	Rpl26	Large ribosomal subunit protein uL24	0	YVIYIER	YVIYIER	2	YVIYIER2	28350.6	18485.8	23434.6
D3ZCJ3	D3ZCJ3	D3ZCJ3_RAT	Mfsd6	Major facilitator superfamily domain containing 6	1	YVLADPFNGICR	YVLADPFNGIC(UniMod:4)R	2	YVLADPFNGIC(UniMod:4)R2	39898.9	40990.2	49825.3
Q501W1	Q501W1	Q501W1_RAT	Txk	Tyrosine-protein kinase	1	YVLDDEYISSSGAK	YVLDDEYISSSGAK	2	YVLDDEYISSSGAK2		1338.72	3593.39
A0A0G2K6M9	A0A0G2K6M9	A0A0G2K6M9_RAT	Btk	Tyrosine-protein kinase	1	YVLDDEYTSSVGSK	YVLDDEYTSSVGSK	2	YVLDDEYTSSVGSK2	51362.5	50649.1	50049.9
Q62825	Q62825	EXOC3_RAT	Exoc3	Exocyst complex component 3	1	YVLDDLVIAK	YVLDDLVIAK	2	YVLDDLVIAK2	11630.3	13975.9	21065.2
Q04462	Q04462	SYVC_RAT	Vars1	Valine--tRNA ligase	1	YVLDPSAR	YVLDPSAR	2	YVLDPSAR2	153616	153041	138444
A0A0G2JXN8	A0A0G2JXN8	A0A0G2JXN8_RAT	Osbpl8	Oxysterol-binding protein	1	YVLEEAQR	YVLEEAQR	2	YVLEEAQR2	24501.3	22467.4	28163.7
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	YVLEPEISFTADNSFAK	YVLEPEISFTADNSFAK	2	YVLEPEISFTADNSFAK2	101782	98318.9	92093.9
Q9JLA3	Q9JLA3	UGGG1_RAT	Uggt1	UDP-glucose:glycoprotein glucosyltransferase 1	1	YVLEPEISFTADNSFAK	YVLEPEISFTADNSFAK	3	YVLEPEISFTADNSFAK3	16116.2	18018.3	21901.2
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	YVLGDTAMQK	YVLGDTAMQK	2	YVLGDTAMQK2	64552.1	65239.2	66909.8
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	YVLHCQGTEEEK	YVLHC(UniMod:4)QGTEEEK	2	YVLHC(UniMod:4)QGTEEEK2	24069.5	28257.8	35104.5
Q5U2Q7	Q5U2Q7	ERF1_RAT	Etf1	Eukaryotic peptide chain release factor subunit 1	1	YVLHCQGTEEEK	YVLHC(UniMod:4)QGTEEEK	3	YVLHC(UniMod:4)QGTEEEK3	55173.3	93944.6	73751.6
Q68FW9	Q68FW9	CSN3_RAT	Cops3	COP9 signalosome complex subunit 3	1	YVLHMIEDGEIFASINQK	YVLHMIEDGEIFASINQK	3	YVLHMIEDGEIFASINQK3	23207.2	15290.4	26695.7
D4A518	D4A518	D4A518_RAT	Dennd4a	DENN domain containing 4A	1	YVLIQMLWDNMK	YVLIQMLWDNMK	2	YVLIQMLWDNMK2	3617.05		
Q3KRE0	Q3KRE0	ATAD3_RAT	Atad3	ATPase family AAA domain-containing protein 3	1	YVLKPATEGK	YVLKPATEGK	2	YVLKPATEGK2	12430.6	8243.31	11653.6
D3ZEH1	D3ZEH1	D3ZEH1_RAT	Fat4	FAT atypical cadherin 4	1	YVLLVVASDR	YVLLVVASDR	2	YVLLVVASDR2	67366.4	29614.6	20645.1
Q66H50	Q66H50	FACR1_RAT	Far1	Fatty acyl-CoA reductase 1	1	YVLNEEMSGLPAAR	YVLNEEMSGLPAAR	2	YVLNEEMSGLPAAR2	2261.32	2007.84	2205.53
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	YVLPNFEVK	YVLPNFEVK	2	YVLPNFEVK2	2.91842e+07	3.33512e+07	3.21181e+07
A0A8I5ZWI8	A0A8I5ZWI8	A0A8I5ZWI8_RAT	Dnajc19	DnaJ heat shock protein family (Hsp40) member C19	1	YVLQAMK	YVLQAMK	2	YVLQAMK2	29763.8	17438.7	25677.7
A0A0G2K0I6	A0A0G2K0I6	A0A0G2K0I6_RAT	Cdh5	Cadherin 5	1	YVLQGEQAGK	YVLQGEQAGK	2	YVLQGEQAGK2	96614	115744	102690
P08650	P08650	CO5_RAT	C5	Complement C5	1	YVLSPYTLNLVATPLFLKPGIPFSIK	YVLSPYTLNLVATPLFLKPGIPFSIK	4	YVLSPYTLNLVATPLFLKPGIPFSIK4	17061.6	14952.6	11185.6
Q5FVQ9	Q5FVQ9	TBCE_RAT	Tbce	Tubulin-specific chaperone E	1	YVLTDGPDDDEK	YVLTDGPDDDEK	2	YVLTDGPDDDEK2	4810.87	4060.39	2823.67
D4A0T9	D4A0T9	D4A0T9_RAT	Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	1	YVLTNLNIGSELLR	YVLTNLNIGSELLR	2	YVLTNLNIGSELLR2		10419.4	16226.2
B2GUZ3	B2GUZ3	B2GUZ3_RAT	Mthfd1l	formate--tetrahydrofolate ligase	1	YVLVAGITPTPLGEGK	YVLVAGITPTPLGEGK	2	YVLVAGITPTPLGEGK2	25375.8	23528.3	25402.3
P02761	P02761	MUP_RAT		Major urinary protein	1	YVMFHLINFK	YVMFHLINFK	3	YVMFHLINFK3	5345.32		6993.75
P06866	P06866	HPT_RAT	Hp	Haptoglobin	1	YVMLPVADQEK	YVMLPVADQEK	2	YVMLPVADQEK2	2.43353e+06	1.77369e+06	1.70644e+06
P68101	P68101	IF2A_RAT	Eif2s1	Eukaryotic translation initiation factor 2 subunit 1	1	YVMTTTTLER	YVMTTTTLER	2	YVMTTTTLER2	340834	407802	418423
Q9Z1K9	Q9Z1K9	ADA17_RAT	Adam17	Disintegrin and metalloproteinase domain-containing protein 17	1	YVMYPIAVSGDHENNK	YVMYPIAVSGDHENNK	3	YVMYPIAVSGDHENNK3	8556.32	6347.21	10394.4
P46844	P46844	BIEA_RAT	Blvra	Biliverdin reductase A	1	YVNFQFTSGSLEEVPSVGVNK	YVNFQFTSGSLEEVPSVGVNK	3	YVNFQFTSGSLEEVPSVGVNK3	4514.49		
F1LQ70	F1LQ70	LOX12_RAT	Alox12	Polyunsaturated fatty acid lipoxygenase ALOX12	1	YVNGMVHLFYQSDDIVR	YVNGMVHLFYQSDDIVR	3	YVNGMVHLFYQSDDIVR3	62615.9	56966.7	44018.7
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	YVNKEIQNAVQGVK	YVNKEIQNAVQGVK	2	YVNKEIQNAVQGVK2	13456.6	27049.7	24107.1
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	YVNKEIQNAVQGVK	YVNKEIQNAVQGVK	3	YVNKEIQNAVQGVK3	57257.7	136145	157912
P05371	P05371	CLUS_RAT	Clu	Clusterin	1	YVNKEIQNAVQGVKHIK	YVNKEIQNAVQGVKHIK	4	YVNKEIQNAVQGVKHIK4		5256.65	5674.19
Q03348	Q03348	PTPRA_RAT	Ptpra	Receptor-type tyrosine-protein phosphatase alpha	1	YVNLLPYDHSR	YVNLLPYDHSR	3	YVNLLPYDHSR3	129983	138431	139059
B5DF89	B5DF89	CUL3_RAT	Cul3	Cullin-3	1	YVNSIWDLLK	YVNSIWDLLK	2	YVNSIWDLLK2	7299.7	12994.2	10549.3
Q01177	Q01177	PLMN_RAT	Plg	Plasminogen	1	YVNWIER	YVNWIER	2	YVNWIER2	1.01194e+06	940527	986179
P16296	P16296	FA9_RAT	F9	Coagulation factor IX	1	YVNWIKEK	YVNWIKEK	2	YVNWIKEK2	10517.7	12966.9	6743.58
O35889	O35889	AFAD_RAT	Afdn	Afadin	1	YVPDDIPNINSTCFK	YVPDDIPNINSTC(UniMod:4)FK	2	YVPDDIPNINSTC(UniMod:4)FK2	21282.3	31895.2	27580.5
P54319	P54319	PLAP_RAT	Plaa	Phospholipase A-2-activating protein	1	YVPGTSGPSNTVQTADPFTGAGR	YVPGTSGPSNTVQTADPFTGAGR	3	YVPGTSGPSNTVQTADPFTGAGR3	3744.02		7045.28
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	YVPGVGNVTK	YVPGVGNVTK	2	YVPGVGNVTK2	39593.3	56081.2	44909.9
Q62733	Q62733	LAP2_RAT	Tmpo	Lamina-associated polypeptide 2, isoform beta	1	YVPLADVK	YVPLADVK	2	YVPLADVK2	13352.8	15845.2	15423.7
P49744	P49744	TSP4_RAT	Thbs4	Thrombospondin-4	1	YVPNSGQEDADR	YVPNSGQEDADR	2	YVPNSGQEDADR2	241929	28444.4	185464
D3Z955	D3Z955	D3Z955_RAT	Pgm2l1	Phosphoglucomutase 2-like 1	1	YVPTPFVPYAVQELK	YVPTPFVPYAVQELK	2	YVPTPFVPYAVQELK2	2332.09	1759.91	
F1MAR6	F1MAR6	F1MAR6_RAT	Prodh	Proline dehydrogenase	1	YVPYGPVMEVLPYLSR	YVPYGPVMEVLPYLSR	2	YVPYGPVMEVLPYLSR2	6060.27	5049.4	5548.4
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	YVPYTLYSVFNPNDHDLVLIR	YVPYTLYSVFNPNDHDLVLIR	3	YVPYTLYSVFNPNDHDLVLIR3	82300.5	118132	79719.3
F7ELL4	F7ELL4	F7ELL4_RAT	Hgfac	HGF activator	1	YVPYTLYSVFNPNDHDLVLIR	YVPYTLYSVFNPNDHDLVLIR	4	YVPYTLYSVFNPNDHDLVLIR4	11600.9	6358.89	10274.1
Q5FVM6	Q5FVM6	MTMRC_RAT	Mtmr12	Myotubularin-related protein 12	1	YVQEDSCQLGICGR	YVQEDSC(UniMod:4)QLGIC(UniMod:4)GR	2	YVQEDSC(UniMod:4)QLGIC(UniMod:4)GR2	11334.2	12888.2	7555.21
Q75WE7	Q75WE7	VWA5A_RAT	Vwa5a	von Willebrand factor A domain-containing protein 5A	1	YVQELPLESDGALR	YVQELPLESDGALR	2	YVQELPLESDGALR2	15864.5	18172.5	22273.6
A0A8I6A502	A0A8I6A502	A0A8I6A502_RAT	Tns3	Tensin 3	1	YVQFLSGLLSGAVK	YVQFLSGLLSGAVK	2	YVQFLSGLLSGAVK2	2989	1517.73	2864.02
A0A0G2K8Q7	A0A0G2K8Q7	A0A0G2K8Q7_RAT	Lsm2	U6 snRNA-associated Sm-like protein LSm2	1	YVQLPADEVDTQLLQDAAR	YVQLPADEVDTQLLQDAAR	3	YVQLPADEVDTQLLQDAAR3	20968.1	18233	20673.8
D3ZXF8	D3ZXF8	D3ZXF8_RAT	Mrpl43	Mitochondrial ribosomal protein L43	1	YVQQLQR	YVQQLQR	2	YVQQLQR2	6415.24		5256.01
P22734	P22734	COMT_RAT	Comt	Catechol O-methyltransferase	1	YVQQNAKPGDPQSVLEAIDTYCTQK	YVQQNAKPGDPQSVLEAIDTYC(UniMod:4)TQK	3	YVQQNAKPGDPQSVLEAIDTYC(UniMod:4)TQK3	11201.9	11924.7	13797.7
A0A8I5ZTH4	A0A8I5ZTH4	A0A8I5ZTH4_RAT	Fryl	FRY like transcription coactivator	1	YVQSPYWK	YVQSPYWK	2	YVQSPYWK2	46178.4	52338.1	47214.5
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	YVRETGLMAFTNLK	YVRETGLMAFTNLK	2	YVRETGLMAFTNLK2	2428.87	2723.53	3220.03
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	YVRETGLMAFTNLK	YVRETGLMAFTNLK	3	YVRETGLMAFTNLK3	211067	280469	268665
P14046	P14046	A1I3_RAT	A1i3	Alpha-1-inhibitor 3	1	YVRETGLMAFTNLKIK	YVRETGLMAFTNLKIK	4	YVRETGLMAFTNLKIK4	5303.94	6808.24	5539.23
F1LMZ8	F1LMZ8	PSD11_RAT	Psmd11	26S proteasome non-ATPase regulatory subunit 11	1	YVRPFLNSISK	YVRPFLNSISK	3	YVRPFLNSISK3	166571	118730	123634
P04041	P04041	GPX1_RAT	Gpx1	Glutathione peroxidase 1	1	YVRPGGGFEPNFTLFEK	YVRPGGGFEPNFTLFEK	3	YVRPGGGFEPNFTLFEK3	122004	111463	197891
P23764	P23764;Q64625	GPX3_RAT	Gpx3	Glutathione peroxidase 3	0	YVRPGGGFVPNFQLFEK	YVRPGGGFVPNFQLFEK	2	YVRPGGGFVPNFQLFEK2	1.03104e+06	1.12881e+06	867204
P23764	P23764;Q64625	GPX3_RAT	Gpx3	Glutathione peroxidase 3	0	YVRPGGGFVPNFQLFEK	YVRPGGGFVPNFQLFEK	3	YVRPGGGFVPNFQLFEK3	47677.6	55334.7	65222.2
P23764	P23764;Q64625	GPX3_RAT	Gpx3	Glutathione peroxidase 3	0	YVRPGGGFVPNFQLFEK	YVRPGGGFVPNFQLFEK	4	YVRPGGGFVPNFQLFEK4	6942.95	8549.87	6139.21
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	YVSDRPQAFK	YVSDRPQAFK	2	YVSDRPQAFK2	2442	1832.93	1658.6
D4A631	D4A631	BIG1_RAT	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	1	YVSDRPQAFK	YVSDRPQAFK	3	YVSDRPQAFK3	55935.2	72487.2	66160.3
Q05030	Q05030	PGFRB_RAT	Pdgfrb	Platelet-derived growth factor receptor beta	1	YVSELTLVR	YVSELTLVR	2	YVSELTLVR2	20561.7	22864.3	26271.8
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	YVSHFETDGPHVLLYFDSVPTTR	YVSHFETDGPHVLLYFDSVPTTR	3	YVSHFETDGPHVLLYFDSVPTTR3	4.98186e+06	4.6848e+06	4.21541e+06
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	YVSHFETDGPHVLLYFDSVPTTR	YVSHFETDGPHVLLYFDSVPTTR	4	YVSHFETDGPHVLLYFDSVPTTR4	190304	158389	148025
Q3T1G7	Q3T1G7	COG7_RAT	Cog7	Conserved oligomeric Golgi complex subunit 7	1	YVSHFTNALQSIR	YVSHFTNALQSIR	3	YVSHFTNALQSIR3	21355.1	14772.3	19269.6
A0A8I6ACP7	A0A8I6ACP7	A0A8I6ACP7_RAT	Slc35b3	Solute carrier family 35 member B3	1	YVSITVPSK	YVSITVPSK	2	YVSITVPSK2	52311.1	48585.6	45234.6
Q4V8K3	Q4V8K3;A0A8I6A9B2;A0A0G2K7P4	NAA11_RAT	Naa11	N-alpha-acetyltransferase 11	0	YVSLHVR	YVSLHVR	2	YVSLHVR2	13364.4	8605.41	8181.75
A0A8I6ADA8	A0A8I6ADA8	A0A8I6ADA8_RAT	Abhd4	Abhydrolase domain containing 4, N-acyl phospholipase B	1	YVSLPNQNK	YVSLPNQNK	2	YVSLPNQNK2	70019.1	93074.4	67743.5
O54980	O54980	SNG2_RAT	Syngr2	Synaptogyrin-2	1	YVSQPQVVTR	YVSQPQVVTR	2	YVSQPQVVTR2	64413.9	42023.8	52980.1
Q62902	Q62902	LMAN1_RAT	Lman1	Protein ERGIC-53	1	YVSSLTEEISR	YVSSLTEEISR	2	YVSSLTEEISR2	152727	123137	154318
Q62902	Q62902	LMAN1_RAT	Lman1	Protein ERGIC-53	1	YVSSLTEEISRR	YVSSLTEEISRR	3	YVSSLTEEISRR3	40560.9	41172.9	47503.5
A0A0G2JVL5	A0A0G2JVL5	A0A0G2JVL5_RAT	Rimoc1	Similar to expressed sequence AW549877	1	YVSVCEGPLKEQEWNTTNAK	YVSVC(UniMod:4)EGPLKEQEWNTTNAK	3	YVSVC(UniMod:4)EGPLKEQEWNTTNAK3	4651.74	3355.4	13657.1
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	YVSVHVDNSR	YVSVHVDNSR	2	YVSVHVDNSR2	3550.89	2433.55	2688.44
A0A8I6A4L1	A0A8I6A4L1	A0A8I6A4L1_RAT	Mycbp2	RCR-type E3 ubiquitin transferase	1	YVSVHVDNSR	YVSVHVDNSR	3	YVSVHVDNSR3	54440.9	58239.3	51263.4
D4A3E0	D4A3E0	D4A3E0_RAT	Mmrn1	Multimerin 1	1	YVSVLQETASK	YVSVLQETASK	2	YVSVLQETASK2	64384.6	42417.1	3.65275e+06
Q5XXR3	Q5XXR3	ARHG6_RAT	Arhgef6	Rho guanine nucleotide exchange factor 6	1	YVTLLQELER	YVTLLQELER	2	YVTLLQELER2	5942.37	2800.37	
A0A8I6G2U9	A0A8I6G2U9	A0A8I6G2U9_RAT	Sh3pxd2a	SH3 and PX domains 2A	1	YVTVQPYTSQSK	YVTVQPYTSQSK	2	YVTVQPYTSQSK2		1989.56	
P01026	P01026	CO3_RAT	C3	Complement C3	1	YVTVVANFGATVVEK	YVTVVANFGATVVEK	2	YVTVVANFGATVVEK2	34523.2	16650.3	24309
P01026	P01026	CO3_RAT	C3	Complement C3	1	YVTVVANFGATVVEK	YVTVVANFGATVVEK	3	YVTVVANFGATVVEK3	6931.79		1911.11
P70541	P70541	EI2BG_RAT	Eif2b3	Translation initiation factor eIF-2B subunit gamma	1	YVVDFLMENK	YVVDFLMENK	2	YVVDFLMENK2	14726.8	18644.5	17271.2
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	YVVGLEDHVSSK	YVVGLEDHVSSK	2	YVVGLEDHVSSK2	6152.85	4222.63	9866.47
B5DFC9	B5DFC9	NID2_RAT	Nid2	Nidogen-2	1	YVVGLEDHVSSK	YVVGLEDHVSSK	3	YVVGLEDHVSSK3	53995.6	53520.7	52069.6
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	YVVGLIIK	YVVGLIIK	2	YVVGLIIK2	25796	18718.6	17934.2
Q5RJS6	Q5RJS6	MSPD1_RAT	Mospd1	Motile sperm domain-containing protein 1	1	YVVIDAAGAVKPQCCVDIVIR	YVVIDAAGAVKPQC(UniMod:4)C(UniMod:4)VDIVIR	3	YVVIDAAGAVKPQC(UniMod:4)C(UniMod:4)VDIVIR3	14070.1	5411.09	10714.2
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	YVVISQGLDKPR	YVVISQGLDKPR	2	YVVISQGLDKPR2	41208.6	54822.8	59719.8
G3V928	G3V928	LRP1_RAT	Lrp1	Prolow-density lipoprotein receptor-related protein 1	1	YVVISQGLDKPR	YVVISQGLDKPR	3	YVVISQGLDKPR3	182925	226830	219171
F7EZ89	F7EZ89	F7EZ89_RAT	Tbc1d15	TBC1 domain family, member 15	1	YVVLCESSQDSR	YVVLC(UniMod:4)ESSQDSR	2	YVVLC(UniMod:4)ESSQDSR2	29787.5	32550.7	33387.6
A0A0G2K7P4	A0A0G2K7P4	A0A0G2K7P4_RAT	RGD1560212	N-terminal amino-acid N(alpha)-acetyltransferase NatA	1	YVVLGSK	YVVLGSK	2	YVVLGSK2	23732.1	20969.9	28344.4
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	YVVLPRPVCFEK	YVVLPRPVC(UniMod:4)FEK	3	YVVLPRPVC(UniMod:4)FEK3	29563	47717.2	45977.9
A0A8I6ABQ2	A0A8I6ABQ2	A0A8I6ABQ2_RAT	Bcl2l13	BCL2 like 13	1	YVVLSYLGLLSQEK	YVVLSYLGLLSQEK	2	YVVLSYLGLLSQEK2	17688.5	22278.3	39739.2
A0A8I6ABQ2	A0A8I6ABQ2	A0A8I6ABQ2_RAT	Bcl2l13	BCL2 like 13	1	YVVLSYLGLLSQEK	YVVLSYLGLLSQEK	3	YVVLSYLGLLSQEK3		5758.94	3623.04
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	YVVLVPSELYAGVPEK	YVVLVPSELYAGVPEK	2	YVVLVPSELYAGVPEK2	8.06687e+06	7.2025e+06	6.37273e+06
Q63041	Q63041	A1M_RAT	A1m	Alpha-1-macroglobulin	1	YVVLVPSELYAGVPEK	YVVLVPSELYAGVPEK	3	YVVLVPSELYAGVPEK3	509373	446186	442849
Q5BK63	Q5BK63	NDUA9_RAT	Ndufa9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	1	YVVNHLGR	YVVNHLGR	2	YVVNHLGR2	21674.6	23297.4	16857.3
P34926	P34926	MAP1A_RAT	Map1a	Microtubule-associated protein 1A	1	YVVTSEK	YVVTSEK	2	YVVTSEK2	39452.1	36690.8	38986.1
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	YVVTSVSWWSHK	YVVTSVSWWSHK	2	YVVTSVSWWSHK2	6393.16	6382.72	7648.25
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	YVVTSVSWWSHK	YVVTSVSWWSHK	3	YVVTSVSWWSHK3	20212.5	39787.4	24326
P27653	P27653	C1TC_RAT	Mthfd1	C-1-tetrahydrofolate synthase, cytoplasmic	1	YVVVTGITPTPLGEGK	YVVVTGITPTPLGEGK	2	YVVVTGITPTPLGEGK2	56059.1	42987.2	59003.8
P31044	P31044	PEBP1_RAT	Pebp1	Phosphatidylethanolamine-binding protein 1	1	YVWLVYEQEQPLNCDEPILSNK	YVWLVYEQEQPLNC(UniMod:4)DEPILSNK	3	YVWLVYEQEQPLNC(UniMod:4)DEPILSNK3		3121.46	4909.78
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	YVYGKPVQGVAYTR	YVYGKPVQGVAYTR	2	YVYGKPVQGVAYTR2	7.66012e+06	7.17972e+06	7.63298e+06
P08649	Q6MG90;P08649	CO4_RAT	C4	Complement C4	0	YVYGKPVQGVAYTR	YVYGKPVQGVAYTR	3	YVYGKPVQGVAYTR3	4.26924e+07	5.04171e+07	5.33396e+07
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	YVYIAELLAHK	YVYIAELLAHK	2	YVYIAELLAHK2	47140.2	6.44024e+06	6.15025e+06
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	YVYIAELLAHK	YVYIAELLAHK	3	YVYIAELLAHK3	158475	142328	138186
P55159	P55159	PON1_RAT	Pon1	Serum paraoxonase/arylesterase 1	1	YVYIAELLAHKIHVYEK	YVYIAELLAHKIHVYEK	4	YVYIAELLAHKIHVYEK4		5599.02	5531.57
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	YVYIWSTYHDLSK	YVYIWSTYHDLSK	2	YVYIWSTYHDLSK2	25984.3	24483.8	18602.3
Q9R037	Q9R037	WDR44_RAT	Wdr44	WD repeat-containing protein 44	1	YVYIWSTYHDLSK	YVYIWSTYHDLSK	3	YVYIWSTYHDLSK3	60586.3	84137.6	71300
A0A8I6AL43	A0A8I6AL43	A0A8I6AL43_RAT	Ate1	Arginyl-tRNA--protein transferase 1	1	YVYKPVMNQTCCPQYTIR	YVYKPVMNQTC(UniMod:4)C(UniMod:4)PQYTIR	3	YVYKPVMNQTC(UniMod:4)C(UniMod:4)PQYTIR3	1459.39	4196.06	4023.49
Q66H80	Q66H80	COPD_RAT	Arcn1	Coatomer subunit delta	1	YVYQPMEK	YVYQPMEK	2	YVYQPMEK2	364723	376821	400123
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	YVYSYEAESSSGVR	YVYSYEAESSSGVR	2	YVYSYEAESSSGVR2	141112	173185	175906
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	YVYSYEAESSSGVR	YVYSYEAESSSGVR	3	YVYSYEAESSSGVR3	55755.6	69981.1	80111.4
Q6AXM8	Q6AXM8	PON2_RAT	Pon2	Serum paraoxonase/arylesterase 2	1	YVYVADILAHEIHVLEK	YVYVADILAHEIHVLEK	3	YVYVADILAHEIHVLEK3	18417.1	22294.8	61471.3
Q6AXM8	Q6AXM8	PON2_RAT	Pon2	Serum paraoxonase/arylesterase 2	1	YVYVADILAHEIHVLEK	YVYVADILAHEIHVLEK	4	YVYVADILAHEIHVLEK4	19942.7	32331.9	40851.1
Q68FP2	Q68FP2	PON3_RAT	Pon3	Serum paraoxonase/lactonase 3	1	YVYVADVTAK	YVYVADVTAK	2	YVYVADVTAK2	52816.7	51114.6	57366.6
D3Z8E0	D3Z8E0	D3Z8E0_RAT	Rps6ka3	Ribosomal protein S6 kinase	1	YVYVVTELMK	YVYVVTELMK	2	YVYVVTELMK2	17290.8	7731.36	8513.17
Q9ES71	Q9ES71	GNPAT_RAT	Gnpat	Dihydroxyacetone phosphate acyltransferase	1	YVYYVNGPATSK	YVYYVNGPATSK	2	YVYYVNGPATSK2	8671.86	6932.62	3419.46
O54857	O54857	PTEN_RAT	Pten	Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN	1	YVYYYSYLLK	YVYYYSYLLK	2	YVYYYSYLLK2	14749.6	12483.7	15713.9
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	YWCHWEADENGR	YWC(UniMod:4)HWEADENGR	3	YWC(UniMod:4)HWEADENGR3	16954.1	16826.2	14481.6
P15083	P15083	PIGR_RAT	Pigr	Polymeric immunoglobulin receptor	1	YWCHWEADENGRCPVLVGTQALVQEGYEGR	YWC(UniMod:4)HWEADENGRC(UniMod:4)PVLVGTQALVQEGYEGR	4	YWC(UniMod:4)HWEADENGRC(UniMod:4)PVLVGTQALVQEGYEGR4	10933.6	5759.01	6701.18
Q6MG56	Q6MG56	LY66F_RAT	Ly6g6f	Lymphocyte antigen 6 complex locus protein G6f	1	YWCTVMDQNHK	YWC(UniMod:4)TVMDQNHK	2	YWC(UniMod:4)TVMDQNHK2	114374	127920	128563
Q6MG56	Q6MG56	LY66F_RAT	Ly6g6f	Lymphocyte antigen 6 complex locus protein G6f	1	YWCTVMDQNHK	YWC(UniMod:4)TVMDQNHK	3	YWC(UniMod:4)TVMDQNHK3	665974	657172	714432
Q4FZT2	Q4FZT2	PPME1_RAT	Ppme1	Protein phosphatase methylesterase 1	1	YWDGWFR	YWDGWFR	2	YWDGWFR2	24126.5	24916.5	20655.1
Q99N27	Q99N27	SNX1_RAT	Snx1	Sorting nexin-1	1	YWEAFLPEAR	YWEAFLPEAR	2	YWEAFLPEAR2	253075	298186	263065
M0R5F1	M0R5F1	M0R5F1_RAT	Aspn	Asporin	1	YWEIQPATFR	YWEIQPATFR	2	YWEIQPATFR2	242319	238973	245122
Q5RKH9	Q5RKH9	Q5RKH9_RAT	Derl1	Derlin	1	YWFAATVAVPLIGK	YWFAATVAVPLIGK	2	YWFAATVAVPLIGK2	3540.93	3054.52	2584.33
A1L1J9	A1L1J9	LMF2_RAT	Lmf2	Lipase maturation factor 2	1	YWFSKPGDQSR	YWFSKPGDQSR	2	YWFSKPGDQSR2	10479.1	7163.53	
A1L1J9	A1L1J9	LMF2_RAT	Lmf2	Lipase maturation factor 2	1	YWFSKPGDQSR	YWFSKPGDQSR	3	YWFSKPGDQSR3	55383.2	63572.2	64432.4
O54715	O54715	VAS1_RAT	Atp6ap1	V-type proton ATPase subunit S1	1	YWFTMER	YWFTMER	2	YWFTMER2	64250.9	68723.9	57313
P35559	P35559	IDE_RAT	Ide	Insulin-degrading enzyme	1	YWGEIISQQYNYDRDNIEVAYLK	YWGEIISQQYNYDRDNIEVAYLK	3	YWGEIISQQYNYDRDNIEVAYLK3		3616.71	1552.96
A0A8I6AUE0	A0A8I6AUE0	A0A8I6AUE0_RAT	Pitpnm2	Phosphatidylinositol transfer protein, membrane-associated 2	1	YWGMQSK	YWGMQSK	2	YWGMQSK2	18551.8	35201.4	34377.1
P04916	P04916	RET4_RAT	Rbp4	Retinol-binding protein 4	1	YWGVASFLQR	YWGVASFLQR	2	YWGVASFLQR2	349846	299518	313307
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	YWHDTCFR	YWHDTC(UniMod:4)FR	2	YWHDTC(UniMod:4)FR2	41571.7	32061.1	15526.5
Q9WUH4	Q9WUH4	FHL1_RAT	Fhl1	Four and a half LIM domains protein 1	1	YWHDTCFR	YWHDTC(UniMod:4)FR	3	YWHDTC(UniMod:4)FR3	74807.4	50092.6	55433.6
P63245	P63245	RACK1_RAT	Rack1	Small ribosomal subunit protein RACK1	1	YWLCAATGPSIK	YWLC(UniMod:4)AATGPSIK	2	YWLC(UniMod:4)AATGPSIK2	32083	35785.5	34497
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	YWLEEAECR	YWLEEAEC(UniMod:4)R	2	YWLEEAEC(UniMod:4)R2	68309.9	82133.5	70801.5
Q4G061	Q4G061	EIF3B_RAT	Eif3b	Eukaryotic translation initiation factor 3 subunit B	1	YWLEEAECRDQYSVIFESGDR	YWLEEAEC(UniMod:4)RDQYSVIFESGDR	3	YWLEEAEC(UniMod:4)RDQYSVIFESGDR3	12371.6	8347.26	8926.84
D4AE56	D4AE56	D4AE56_RAT	Ptges2	Prostaglandin E synthase 2	1	YWLMLDQK	YWLMLDQK	2	YWLMLDQK2	8110.61	10216.2	1606.9
F1LV21	F1LV21	F1LV21_RAT	Ubash3b	Ubiquitin associated and SH3 domain containing, B	1	YWLSQCFDAK	YWLSQC(UniMod:4)FDAK	2	YWLSQC(UniMod:4)FDAK2	358614	347002	249933
P97532	P97532	THTM_RAT	Mpst	3-mercaptopyruvate sulfurtransferase	1	YWLSQNLPISSGK	YWLSQNLPISSGK	2	YWLSQNLPISSGK2	32707.9	18774.1	10723.3
D3ZUQ1	D3ZUQ1	D3ZUQ1_RAT	Lipo1	Lipase	1	YWNYPSLEYEVVTDDGYILPINR	YWNYPSLEYEVVTDDGYILPINR	3	YWNYPSLEYEVVTDDGYILPINR3	14629.2	21701.7	20329.5
P41499	P41499	PTN11_RAT	Ptpn11	Tyrosine-protein phosphatase non-receptor type 11	1	YWPDECALK	YWPDEC(UniMod:4)ALK	2	YWPDEC(UniMod:4)ALK2	220621	168588	208694
P50442	P50442	GATM_RAT	Gatm	Glycine amidinotransferase, mitochondrial	1	YWPFYQK	YWPFYQK	2	YWPFYQK2	92280.7	66894.9	82310.6
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	YWPLYGEDPITFAPFK	YWPLYGEDPITFAPFK	2	YWPLYGEDPITFAPFK2	39103.3	40628.3	35231.3
G3V7Q4	G3V7Q4	G3V7Q4_RAT	Ptpn12	Tyrosine-protein phosphatase non-receptor type 12	1	YWPLYGEDPITFAPFK	YWPLYGEDPITFAPFK	3	YWPLYGEDPITFAPFK3	4403.24	7499.64	7203.09
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	YWPQEAGEYAVHVLCNSEDIR	YWPQEAGEYAVHVLC(UniMod:4)NSEDIR	3	YWPQEAGEYAVHVLC(UniMod:4)NSEDIR3	3.30302e+06	3.21645e+06	3.53446e+06
A0A8I5ZV49	A0A8I5ZV49	A0A8I5ZV49_RAT	Flna	Filamin A	1	YWPQEAGEYAVHVLCNSEDIR	YWPQEAGEYAVHVLC(UniMod:4)NSEDIR	4	YWPQEAGEYAVHVLC(UniMod:4)NSEDIR4	18108.6	16137.2	16182.1
G3V9L1	G3V9L1	G3V9L1_RAT	Tex2	Testis expressed 2	1	YWSDVVSK	YWSDVVSK	2	YWSDVVSK2	10293.4	11513	6155.65
D3ZXI3	D3ZXI3	D3ZXI3_RAT	Notum	NOTUM, palmitoleoyl-protein carboxylesterase	1	YWSGMVPER	YWSGMVPER	2	YWSGMVPER2	23686.5	19282.8	31747
C0M4B0	C0M4B0	C0M4B0_RAT	Mmp19	Matrix metallopeptidase 19	1	YWSNVAPLTFR	YWSNVAPLTFR	2	YWSNVAPLTFR2	89497.6	83903.6	78000.2
D4A0G0	D4A0G0	D4A0G0_RAT	Osbpl7	Oxysterol-binding protein	1	YWSSNIHEVQGAVLSR	YWSSNIHEVQGAVLSR	3	YWSSNIHEVQGAVLSR3	5132.84	5925.39	6614.49
D3ZHZ3	D3ZHZ3	D3ZHZ3_RAT	Osbpl3	Oxysterol-binding protein	1	YWSTNAHEIEGTVFDR	YWSTNAHEIEGTVFDR	3	YWSTNAHEIEGTVFDR3	2139.88		5601.59
Q9EQT5	Q9EQT5	TINAL_RAT	Tinagl1	Tubulointerstitial nephritis antigen-like	1	YWTAANSWGPWWGER	YWTAANSWGPWWGER	2	YWTAANSWGPWWGER2	7827.43	5509.93	14961.7
B2GV54	B2GV54	NCEH1_RAT	Nceh1	Neutral cholesterol ester hydrolase 1	1	YWVDYFK	YWVDYFK	2	YWVDYFK2	124262	126611	129695
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	YWVPVEYEEEEKPEDK	YWVPVEYEEEEKPEDK	3	YWVPVEYEEEEKPEDK3	47372.3	44670.4	40027.5
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	YWVPVEYEEEEKPEDKEGK	YWVPVEYEEEEKPEDKEGK	3	YWVPVEYEEEEKPEDKEGK3	137849	141746	114262
F7F0E5	F7F0E5	F7F0E5_RAT	Flii	FLII, actin remodeling protein	1	YWVPVEYEEEEKPEDKEGK	YWVPVEYEEEEKPEDKEGK	4	YWVPVEYEEEEKPEDKEGK4	148945	151004	168239
P0C643	P0C643	GRP2_RAT	Rasgrp2	RAS guanyl-releasing protein 2	1	YWVSAFPAEFDLNPELAEQIK	YWVSAFPAEFDLNPELAEQIK	3	YWVSAFPAEFDLNPELAEQIK3	28222.6	34074.7	32214.6
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	YWYKPEISR	YWYKPEISR	2	YWYKPEISR2			3390.54
A0A8I6A4G0	A0A8I6A4G0	A0A8I6A4G0_RAT	Tns1	Tensin 1	1	YWYKPEISR	YWYKPEISR	3	YWYKPEISR3	22152.5		22162.3
D3Z9L0	D3Z9L0	D3Z9L0_RAT	Agk	Acylglycerol kinase, mitochondrial	1	YWYLGPLK	YWYLGPLK	2	YWYLGPLK2	20694.2	18529.2	15118.2
Q80W92	Q80W92	VAC14_RAT	Vac14	Protein VAC14 homolog	1	YYACEALYNIVK	YYAC(UniMod:4)EALYNIVK	2	YYAC(UniMod:4)EALYNIVK2	11567.8	7269.44	13293.1
Q4V8K3	Q4V8K3;A0A8I6A9B2;A0A0G2K7P4	NAA11_RAT	Naa11	N-alpha-acetyltransferase 11	0	YYADGEDAYAMK	YYADGEDAYAMK	2	YYADGEDAYAMK2	25446.5	19456.6	14206.2
A0A8I6A6C3	A0A8I6A938;A0A8I6A5B2;A0A8I6A6C3	A0A8I6A6C3_RAT	ENSRNOG00000067603	Ig-like domain-containing protein	0	YYADSVK	YYADSVK	1	YYADSVK1	3393.99	5081.7	5000.59
A0A8I6A6C3	A0A8I6A938;A0A8I6A5B2;A0A8I6A6C3	A0A8I6A6C3_RAT	ENSRNOG00000067603	Ig-like domain-containing protein	0	YYADSVK	YYADSVK	2	YYADSVK2	660942	619491	633269
P10868	P10868	GAMT_RAT	Gamt	Guanidinoacetate N-methyltransferase	1	YYAFPQMITPLVTK	YYAFPQMITPLVTK	2	YYAFPQMITPLVTK2	10191.4	6323.74	7098.41
P55314	P55314	CO8B_RAT	C8b	Complement component C8 beta chain	1	YYAGACSPHYILNTNFR	YYAGAC(UniMod:4)SPHYILNTNFR	3	YYAGAC(UniMod:4)SPHYILNTNFR3	384118	437310	428326
P11884	P11884;Q63639	ALDH2_RAT	Aldh2	Aldehyde dehydrogenase, mitochondrial	0	YYAGWADK	YYAGWADK	2	YYAGWADK2	162019	197410	172242
P16036	P16036	S25A3_RAT	Slc25a3	Solute carrier family 25 member 3	1	YYALCGFGGVLSCGLTHTAVVPLDLVK	YYALC(UniMod:4)GFGGVLSC(UniMod:4)GLTHTAVVPLDLVK	3	YYALC(UniMod:4)GFGGVLSC(UniMod:4)GLTHTAVVPLDLVK3	410965	431352	371001
Q8R492	Q8R492	Q8R492_RAT	Fap	Fibroblast activation protein, alpha	1	YYALICYGPGLPISTLHDGR	YYALIC(UniMod:4)YGPGLPISTLHDGR	3	YYALIC(UniMod:4)YGPGLPISTLHDGR3	3469.49	4155.82	6206.2
P29995	P29995	ITPR2_RAT	Itpr2	Inositol 1,4,5-trisphosphate receptor type 2	1	YYANHTAQIEIVR	YYANHTAQIEIVR	3	YYANHTAQIEIVR3	8378.59	12699.7	13962.5
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	YYASAVDPER	YYASAVDPER	2	YYASAVDPER2	111388	99288.1	100731
Q4QQW4	Q4QQW4;D3ZVU7	HDAC1_RAT	Hdac1	Histone deacetylase 1	0	YYAVNYPLR	YYAVNYPLR	2	YYAVNYPLR2	4578.53		3648.87
F1M625	F1M625	UBP46_RAT	Usp46	Ubiquitin carboxyl-terminal hydrolase 46	1	YYCETCCSK	YYC(UniMod:4)ETC(UniMod:4)C(UniMod:4)SK	2	YYC(UniMod:4)ETC(UniMod:4)C(UniMod:4)SK2	4797.68	2966.52	7587.75
P20059	P20059	HEMO_RAT	Hpx	Hemopexin	1	YYCFQGNK	YYC(UniMod:4)FQGNK	2	YYC(UniMod:4)FQGNK2	977189	1.13417e+06	1.16907e+06
A0A8I5ZZN6	A0A8I5ZZN6	A0A8I5ZZN6_RAT	Ubr1	E3 ubiquitin-protein ligase	1	YYCVLFNDEHHSYDHVIYSLQR	YYC(UniMod:4)VLFNDEHHSYDHVIYSLQR	4	YYC(UniMod:4)VLFNDEHHSYDHVIYSLQR4	7217.61	10599.5	4053.49
A0A0G2KAF4	A0A0G2KAF4	A0A0G2KAF4_RAT	Nfxl1	Nuclear transcription factor, X-box binding-like 1	1	YYCYCGK	YYC(UniMod:4)YC(UniMod:4)GK	2	YYC(UniMod:4)YC(UniMod:4)GK2	8166.01	9287.63	14335.6
Q5FWY5	Q5FWY5	AIP_RAT	Aip	AH receptor-interacting protein	1	YYDAIACLK	YYDAIAC(UniMod:4)LK	2	YYDAIAC(UniMod:4)LK2	10370.7	15232.4	11436.8
A0A8I6GK73	A0A8I6GK73	A0A8I6GK73_RAT	Copz1	Coatomer subunit zeta	1	YYDDTYPSVK	YYDDTYPSVK	2	YYDDTYPSVK2	97881.9	74941.3	87731
D3ZDU2	D3ZDU2	D3ZDU2_RAT	Rptor	Regulatory associated protein of MTOR, complex 1	1	YYDGFMGQR	YYDGFMGQR	2	YYDGFMGQR2	18062.3	15943.3	15710.6
Q9QZA2	Q9QZA2	PDC6I_RAT	Pdcd6ip	Programmed cell death 6-interacting protein	1	YYDQICSIEPK	YYDQIC(UniMod:4)SIEPK	2	YYDQIC(UniMod:4)SIEPK2	19103	14349.1	12817.6
A0A8I6ASK1	A0A8I6ASK1	A0A8I6ASK1_RAT	P4ha2	procollagen-proline 4-dioxygenase	1	YYDVMSDEEIER	YYDVMSDEEIER	2	YYDVMSDEEIER2	33918.5	37280.5	36168
B2RYP3	B2RYP3	B2RYP3_RAT	Fam91a1	Fam91a1 protein	1	YYEELLK	YYEELLK	2	YYEELLK2	22596	29856.2	26997.5
D4ABB8	D4ABB8	ATP9B_RAT	Atp9b	Probable phospholipid-transporting ATPase IIB	1	YYEHELVELACQCPAVVCCR	YYEHELVELAC(UniMod:4)QC(UniMod:4)PAVVC(UniMod:4)C(UniMod:4)R	3	YYEHELVELAC(UniMod:4)QC(UniMod:4)PAVVC(UniMod:4)C(UniMod:4)R3	5066.93	5001.59	2990.31
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	YYEIEEK	YYEIEEK	1	YYEIEEK1	11155.4	10518.7	11239.4
Q7TMA5	Q7TMA5	APOB_RAT	Apob	Apolipoprotein B-100	1	YYEIEEK	YYEIEEK	2	YYEIEEK2	286983	365877	323108
A4V8B4	A4V8B4	SAV1_RAT	Sav1	Protein salvador homolog 1	1	YYEYNHDLFQR	YYEYNHDLFQR	3	YYEYNHDLFQR3	55772.9	58600.5	56589.9
Q6PEC3	Q6PEC3	YIF1B_RAT	Yif1b	Protein YIF1B	1	YYFAVDTVYVGK	YYFAVDTVYVGK	2	YYFAVDTVYVGK2	17436.1	28968.7	24137.8
B0BN63	B0BN63	B0BN63_RAT	Ahsa1	Activator of Hsp90 ATPase activity 1	1	YYFEGIK	YYFEGIK	2	YYFEGIK2	30536.8	19201.5	26149.3
F7F0H6	F7F0H6	F7F0H6_RAT	Ifgga2l1	Similar to interferon-inducible GTPase	1	YYFLDIVTEDAK	YYFLDIVTEDAK	2	YYFLDIVTEDAK2	4226.82	3238.17	
Q5U2V8	Q5U2V8	EMC3_RAT	Emc3	ER membrane protein complex subunit 3	1	YYFNNPEDGFFK	YYFNNPEDGFFK	2	YYFNNPEDGFFK2	34373.8	45958	34595.9
Q5U2V8	Q5U2V8	EMC3_RAT	Emc3	ER membrane protein complex subunit 3	1	YYFNNPEDGFFKK	YYFNNPEDGFFKK	3	YYFNNPEDGFFKK3	4688.85	14274.7	9910.17
F1LWX9	F1LWX9	F1LWX9_RAT	Tmem117	Transmembrane protein 117	1	YYFQHPWSR	YYFQHPWSR	3	YYFQHPWSR3	16156.1	14320.9	8424.81
D4A8H3	D4A8H3	D4A8H3_RAT	Uba6	E1 ubiquitin-activating enzyme	1	YYFSHDTDE	YYFSHDTDE	2	YYFSHDTDE2	16468.3	15003.6	13563.6
P14408	P14408	FUMH_RAT	Fh	Fumarate hydratase, mitochondrial	1	YYGAQTVR	YYGAQTVR	2	YYGAQTVR2	361281	358278	414558
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	YYGGQCETVYNGDWR	YYGGQC(UniMod:4)ETVYNGDWR	2	YYGGQC(UniMod:4)ETVYNGDWR2	11275.4	15821.8	13232.8
D3ZWD6	D3ZWD6	D3ZWD6_RAT	C8a	Complement C8 alpha chain	1	YYGGQCETVYNGDWR	YYGGQC(UniMod:4)ETVYNGDWR	3	YYGGQC(UniMod:4)ETVYNGDWR3	14108	13054	13413.2
Q80U96	Q80U96	XPO1_RAT	Xpo1	Exportin-1	1	YYGLQILENVIK	YYGLQILENVIK	2	YYGLQILENVIK2	20184.8	22976.8	17905.8
P29994	P29994	ITPR1_RAT	Itpr1	Inositol 1,4,5-trisphosphate receptor type 1	1	YYGNIRPSGR	YYGNIRPSGR	3	YYGNIRPSGR3	259874	320085	331323
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	YYHAQCNFFQDGLK	YYHAQC(UniMod:4)NFFQDGLK	2	YYHAQC(UniMod:4)NFFQDGLK2	11774.1	7518.59	7105.31
Q1AAU6	Q1AAU6	ASAP1_RAT	Asap1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	YYHAQCNFFQDGLK	YYHAQC(UniMod:4)NFFQDGLK	3	YYHAQC(UniMod:4)NFFQDGLK3	46563.6	54973.4	41740.8
A0A8I6ABM0	A0A8I6ABM0	A0A8I6ABM0_RAT	Rit1	Ras-like without CAAX 1	1	YYIDDVFHALVR	YYIDDVFHALVR	3	YYIDDVFHALVR3	13094.3	1356.57	5247.32
A4V8B4	A4V8B4	SAV1_RAT	Sav1	Protein salvador homolog 1	1	YYIDHNTNTTHWSHPLER	YYIDHNTNTTHWSHPLER	3	YYIDHNTNTTHWSHPLER3	4258.22	2530.7	1389.18
A4V8B4	A4V8B4	SAV1_RAT	Sav1	Protein salvador homolog 1	1	YYIDHNTNTTHWSHPLER	YYIDHNTNTTHWSHPLER	4	YYIDHNTNTTHWSHPLER4	23470.3	27872.4	30774.9
D4A208	D4A208	SRGP2_RAT	Srgap2	SLIT-ROBO Rho GTPase-activating protein 2	1	YYIHDLSDIIDQCCDLGYHASLNR	YYIHDLSDIIDQC(UniMod:4)C(UniMod:4)DLGYHASLNR	4	YYIHDLSDIIDQC(UniMod:4)C(UniMod:4)DLGYHASLNR4	12178.8	12425.4	4496.19
F1M5M9	F1M5M9	F1M5M9_RAT	Srgap3	SLIT-ROBO Rho GTPase activating protein 3	1	YYIHDVSDLIDCCDLGFHASLAR	YYIHDVSDLIDC(UniMod:4)C(UniMod:4)DLGFHASLAR	4	YYIHDVSDLIDC(UniMod:4)C(UniMod:4)DLGFHASLAR4	29701.8	32689.5	28935.7
A0A0G2JW29	A0A0G2JW29	A0A0G2JW29_RAT	Man1a1	alpha-1,2-Mannosidase	1	YYILRPEVIETYMYMWR	YYILRPEVIETYMYMWR	3	YYILRPEVIETYMYMWR3		3177.39	3461.77
Q66H69	Q66H69	B3GN7_RAT	B3gnt7	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7	1	YYIPAVMYSK	YYIPAVMYSK	2	YYIPAVMYSK2		8173.26	15285.5
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	YYKPAEIK	YYKPAEIK	2	YYKPAEIK2		5089.99	
A0A8I5Y1T6	Q9JMB3;Q9WTP0;A0A8I5Y1T6	A0A8I5Y1T6_RAT	Epb41	Protein 4.1	0	YYLCLQLR	YYLC(UniMod:4)LQLR	2	YYLC(UniMod:4)LQLR2	22028.1	21018.2	16343.2
Q68A21	Q68A21;D3ZYS1	PURB_RAT	Purb	Transcriptional activator protein Pur-beta	0	YYLDLKENQR	YYLDLKENQR	3	YYLDLKENQR3	11151.9	22436.7	19578.8
Q920F5	Q920F5	DCMC_RAT	Mlycd	Malonyl-CoA decarboxylase, mitochondrial	1	YYLEETGPNSISYLGSK	YYLEETGPNSISYLGSK	2	YYLEETGPNSISYLGSK2	2184.82	2393.04	3851.15
D3ZEB1	D3ZEB1	D3ZEB1_RAT	F8	Coagulation factor VIII	1	YYLGAVELPWDYVSGGASGAQR	YYLGAVELPWDYVSGGASGAQR	3	YYLGAVELPWDYVSGGASGAQR3	78570.7	68123.4	76968.8
P82471	P82471	GNAQ_RAT	Gnaq	Guanine nucleotide-binding protein G(q) subunit alpha	1	YYLNDLDR	YYLNDLDR	2	YYLNDLDR2	409350	376702	500100
B1WBS4	B1WBS4	B1WBS4_RAT	Vps26b	VPS26 retromer complex component B	1	YYLNLVLIDEEERR	YYLNLVLIDEEERR	3	YYLNLVLIDEEERR3	16855	10991.9	
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	YYLNVCR	YYLNVC(UniMod:4)R	2	YYLNVC(UniMod:4)R2	13678.5		19147.9
G3V824	G3V824	G3V824_RAT	Igf2r	Insulin-like growth factor 2 receptor	1	YYLNVCRPLNPVPGCDR	YYLNVC(UniMod:4)RPLNPVPGC(UniMod:4)DR	3	YYLNVC(UniMod:4)RPLNPVPGC(UniMod:4)DR3	23034.9	26837.9	23845
P86411	P86411	RGPA2_RAT	Ralgapa2	Ral GTPase-activating protein subunit alpha-2	1	YYLPHLFPSFTK	YYLPHLFPSFTK	3	YYLPHLFPSFTK3	4843.36		2941.07
D3ZX40	D3ZX40	D3ZX40_RAT	Ripor3	RIPOR family member 3	1	YYLSVLQQPMQQALLLGGPR	YYLSVLQQPMQQALLLGGPR	3	YYLSVLQQPMQQALLLGGPR3	21293.6	28289.7	38357.2
P24135	P24135	PLCG2_RAT	Plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2	1	YYLTDNLTFNSIYALIQHYR	YYLTDNLTFNSIYALIQHYR	3	YYLTDNLTFNSIYALIQHYR3	1378.96		5260.3
O88763	O88763	PK3C3_RAT	Pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3	1	YYLTNQEK	YYLTNQEK	2	YYLTNQEK2	21930	17456.1	27895.6
O35276	O35276	NRP2_RAT	Nrp2	Neuropilin-2	1	YYLVHQEPPENFQCNAPLGMESGR	YYLVHQEPPENFQC(UniMod:4)NAPLGMESGR	3	YYLVHQEPPENFQC(UniMod:4)NAPLGMESGR3	94497.8	98608.9	120634
A0A8I6ANA0	A0A8I6ANA0	A0A8I6ANA0_RAT	Mfsd8	Major facilitator superfamily domain containing 8	1	YYMLIAR	YYMLIAR	2	YYMLIAR2	11852.7	9037.91	5295.37
B1H267	B1H267	SNX5_RAT	Snx5	Sorting nexin-5	1	YYMLNIEAAK	YYMLNIEAAK	2	YYMLNIEAAK2	89014.1	85981.3	88549
P24155	P24155	THOP1_RAT	Thop1	Thimet oligopeptidase	1	YYMNQVEETR	YYMNQVEETR	2	YYMNQVEETR2	6292.65	5697.27	7877.02
Q8VHC1	Q8VHC1	Q8VHC1_RAT	Cst6	Cystatin E/M	1	YYMTVDIESTECRK	YYMTVDIESTEC(UniMod:4)RK	3	YYMTVDIESTEC(UniMod:4)RK3	14770.6	10108.8	13420.3
D4A7V9	D4A7V9	E2AK4_RAT	Eif2ak4	eIF-2-alpha kinase GCN2	1	YYNAWIER	YYNAWIER	2	YYNAWIER2		7321.7	2767.91
G3V8D0	G3V8D0	G3V8D0_RAT	St8sia3	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	1	YYNNLLTIQDR	YYNNLLTIQDR	2	YYNNLLTIQDR2	1640.2		3062.28
M0RBD5	A0A8I6AC42;D3ZMY4;A0A8I6GE36;M0RBD5	M0RBD5_RAT	ENSRNOG00000070933	Ig-like domain-containing protein	0	YYNPSLK	YYNPSLK	1	YYNPSLK1	10378.3	9973.58	15780.8
M0RBD5	A0A8I6AC42;D3ZMY4;A0A8I6GE36;M0RBD5	M0RBD5_RAT	ENSRNOG00000070933	Ig-like domain-containing protein	0	YYNPSLK	YYNPSLK	2	YYNPSLK2	1.50979e+06	1.67305e+06	1.72437e+06
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	YYNSIGDIIDHYR	YYNSIGDIIDHYR	3	YYNSIGDIIDHYR3	11013.3	9561.65	3147.99
P50904	P50904	RASA1_RAT	Rasa1	Ras GTPase-activating protein 1	1	YYNSIGDIIDHYRK	YYNSIGDIIDHYRK	4	YYNSIGDIIDHYRK4	4337.55	8778.1	7815.93
Q5M868	Q5M868	GBA2_RAT	Gba2	Non-lysosomal glucosylceramidase	1	YYNYDSSSQPQSR	YYNYDSSSQPQSR	2	YYNYDSSSQPQSR2	31273.2	36945.6	34733.3
Q6P6U0	Q6P6U0	FGR_RAT	Fgr	Tyrosine-protein kinase Fgr	1	YYPDPTQGR	YYPDPTQGR	2	YYPDPTQGR2	3290.08		
D3ZE49	D3ZE49	D3ZE49_RAT	Trappc12	Trafficking protein particle complex subunit 12	1	YYPEQEPQLLSGIGR	YYPEQEPQLLSGIGR	2	YYPEQEPQLLSGIGR2	6983.34	9438.12	13833.6
A0A8I6AAF1	A0A8I6AAF1	A0A8I6AAF1_RAT	Card19	Caspase recruitment domain family, member 19	1	YYPQILTNK	YYPQILTNK	2	YYPQILTNK2	54167.3	48662.1	63756.6
P21533	A0A0G2KBA1;P21533	RL6_RAT	Rpl6	Large ribosomal subunit protein eL6	0	YYPTEDVPR	YYPTEDVPR	2	YYPTEDVPR2	32235.4	23021	23289
P21533	A0A0G2KBA1;P21533	RL6_RAT	Rpl6	Large ribosomal subunit protein eL6	0	YYPTEDVPRK	YYPTEDVPRK	3	YYPTEDVPRK3	50767	45343.1	75540.2
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	YYQAILEENKEK	YYQAILEENKEK	2	YYQAILEENKEK2	3190.95	2758.34	
D4A1Q9	D4A1Q9	D4A1Q9_RAT	Ttll12	Tubulin tyrosine ligase like 12	1	YYQAILEENKEK	YYQAILEENKEK	3	YYQAILEENKEK3	12502.7	11652.2	8296.93
P28023	P28023	DCTN1_RAT	Dctn1	Dynactin subunit 1	1	YYQHLYSIHLAEQPEESTMQLADHIK	YYQHLYSIHLAEQPEESTMQLADHIK	4	YYQHLYSIHLAEQPEESTMQLADHIK4	46054.8	58855.2	50254.4
D3ZHV2	D3ZHV2	MACF1_RAT	Macf1	Microtubule-actin cross-linking factor 1	1	YYQLEELAFR	YYQLEELAFR	2	YYQLEELAFR2	15313.8	17304.3	26572.9
Q4G074	Q4G074	KBP_RAT	Kifbp	KIF-binding protein	1	YYQLFLDSLRDPNK	YYQLFLDSLRDPNK	3	YYQLFLDSLRDPNK3	5669.33	4677.03	4112.36
Q5FVP9	Q5FVP9	Q5FVP9_RAT	LOC100361907	Cfh protein	1	YYQSGETQEFK	YYQSGETQEFK	2	YYQSGETQEFK2	38379.1	15363.9	19746
P01026	P01026	CO3_RAT	C3	Complement C3	1	YYQTIEIPPK	YYQTIEIPPK	2	YYQTIEIPPK2	64642.5	42928.6	45383.7
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	YYQTIGNHASYYK	YYQTIGNHASYYK	2	YYQTIGNHASYYK2	7869.91	9602.64	14362.2
B0BN93	B0BN93	PSD13_RAT	Psmd13	26S proteasome non-ATPase regulatory subunit 13	1	YYQTIGNHASYYK	YYQTIGNHASYYK	3	YYQTIGNHASYYK3	64856	58489.5	60784.9
P04937	P04937	FINC_RAT	Fn1	Fibronectin	1	YYRITYGETGGNSPVQEFTVPGSK	YYRITYGETGGNSPVQEFTVPGSK	3	YYRITYGETGGNSPVQEFTVPGSK3	12041.2	17185.3	16687.3
A0A8I6AZI9	A0A8I6AZI9	A0A8I6AZI9_RAT	Ubash3a	Ubiquitin associated and SH3 domain containing, A	1	YYRPDLNFPR	YYRPDLNFPR	3	YYRPDLNFPR3	8249.65	21760.2	17105
Q3MHS7	Q3MHS7	Q3MHS7_RAT	Gmds	GDP-mannose 4,6-dehydratase	1	YYRPTEVDFLQGDCSK	YYRPTEVDFLQGDC(UniMod:4)SK	3	YYRPTEVDFLQGDC(UniMod:4)SK3	7757.08	14806.4	14300.4
Q9R0Z7	Q9R0Z7	AAGAB_RAT	Aagab	Alpha- and gamma-adaptin-binding protein p34	1	YYSAEVNLCVVPSK	YYSAEVNLC(UniMod:4)VVPSK	2	YYSAEVNLC(UniMod:4)VVPSK2	50099.3	41815.7	55271.3
P47245	P47245	NRDC_RAT	Nrdc	Nardilysin	1	YYSAHYMTLVVQSK	YYSAHYMTLVVQSK	3	YYSAHYMTLVVQSK3	8301.16	4533.2	
D3ZES7	D3ZES7	D3ZES7_RAT	Plxna4	Plexin A4	1	YYSDIGK	YYSDIGK	2	YYSDIGK2	100647	119329	117529
B2GVB9	B2GVB9	B2GVB9_RAT	Fermt3	FERM domain containing kindlin 3	1	YYSFFDLDPK	YYSFFDLDPK	2	YYSFFDLDPK2	708473	677789	770645
Q62812	F1LNF0;Q9JLT0;Q62812	MYH9_RAT	Myh9	Myosin-9	0	YYSGLIYTYSGLFCVVINPYK	YYSGLIYTYSGLFC(UniMod:4)VVINPYK	3	YYSGLIYTYSGLFC(UniMod:4)VVINPYK3	10437.4	9636.55	13704.4
P00388	P00388	NCPR_RAT	Por	NADPH--cytochrome P450 reductase	1	YYSIASSSK	YYSIASSSK	2	YYSIASSSK2	61476.9	68544	61840.3
P29524	P29524	PAI2_RAT	Serpinb2	Plasminogen activator inhibitor 2 type A	1	YYSTEPEAVDFLECANEAR	YYSTEPEAVDFLEC(UniMod:4)ANEAR	3	YYSTEPEAVDFLEC(UniMod:4)ANEAR3	18255.7	19104.1	27962.5
B1WBU6	B1WBU6	B1WBU6_RAT	Smox	Spermine oxidase	1	YYSTTHGALLSGQR	YYSTTHGALLSGQR	3	YYSTTHGALLSGQR3	9650.05	14681.8	16668
P28494	P28494	MA2A1_RAT	Man2a1	Alpha-mannosidase 2	1	YYTDLNGYQIQPR	YYTDLNGYQIQPR	2	YYTDLNGYQIQPR2	3206.71	4154.68	4818.38
A0A0G2JWG1	A0A0G2JWG1	A0A0G2JWG1_RAT	Man2a2	Alpha-mannosidase	1	YYTEQTQHILNSMVSK	YYTEQTQHILNSMVSK	3	YYTEQTQHILNSMVSK3	32777.1	33066.4	34976.8
A0A8J8Y8E0	A0A8J8Y8E0	A0A8J8Y8E0_RAT	Fibp	FGF1 intracellular binding protein	1	YYTFDEAFVR	YYTFDEAFVR	2	YYTFDEAFVR2	11172.6	11254.8	8905.4
A0A0G2K762	A0A0G2K762	A0A0G2K762_RAT	Abcf2	ATP binding cassette subfamily F member 2	1	YYTGNYDQYVK	YYTGNYDQYVK	2	YYTGNYDQYVK2	3272.45	8718.14	4328.91
P97603	P97603	NEO1_RAT	Neo1	Neogenin (Fragment)	1	YYTIENLDPSSHYVITLK	YYTIENLDPSSHYVITLK	3	YYTIENLDPSSHYVITLK3	63869.8	60036.8	69654.5
P00173	P00173	CYB5_RAT	Cyb5a	Cytochrome b5	1	YYTLEEIQK	YYTLEEIQK	2	YYTLEEIQK2	66286.1	63001.9	54365.2
P40307	P40307	PSB2_RAT	Psmb2	Proteasome subunit beta type-2	1	YYTPTISR	YYTPTISR	2	YYTPTISR2	2.26466e+06	2.00968e+06	2.03687e+06
Q62771	Q62771	STA5A_RAT	Stat5a	Signal transducer and activator of transcription 5A	1	YYTPVLAK	YYTPVLAK	2	YYTPVLAK2	19421.2	14177.8	22096.3
P82995	P82995	HS90A_RAT	Hsp90aa1	Heat shock protein HSP 90-alpha	1	YYTSASGDEMVSLK	YYTSASGDEMVSLK	2	YYTSASGDEMVSLK2	163024	268138	221802
P01026	P01026	CO3_RAT	C3	Complement C3	1	YYTYLVMNK	YYTYLVMNK	2	YYTYLVMNK2	2.2964e+06	2.27155e+06	2.09505e+06
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	YYVLGATFYPGPECER	YYVLGATFYPGPEC(UniMod:4)ER	2	YYVLGATFYPGPEC(UniMod:4)ER2	819045	858483	814089
D3ZJF8	D3ZJF8	D3ZJF8_RAT	Fcgbp	Fc fragment of IgG binding protein	1	YYVLGATFYPGPECER	YYVLGATFYPGPEC(UniMod:4)ER	3	YYVLGATFYPGPEC(UniMod:4)ER3	165248	172231	193892
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	YYVLLHDVTSGDEQR	YYVLLHDVTSGDEQR	2	YYVLLHDVTSGDEQR2	2924.93		
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	YYVLLHDVTSGDEQR	YYVLLHDVTSGDEQR	3	YYVLLHDVTSGDEQR3	18671.2	14579	20544.8
F1M9W9	F1M9W9	F1M9W9_RAT	Trappc8	Trafficking protein particle complex subunit 8	1	YYVLLHDVTSGDEQRAESIYEEMK	YYVLLHDVTSGDEQRAESIYEEMK	4	YYVLLHDVTSGDEQRAESIYEEMK4	4029.03		
D4A1B2	D4A1B2	D4A1B2_RAT	Arpin	Arpin	1	YYVLYIQPSCIHR	YYVLYIQPSC(UniMod:4)IHR	2	YYVLYIQPSC(UniMod:4)IHR2	3220.11	3182.79	3617.03
D4A1B2	D4A1B2	D4A1B2_RAT	Arpin	Arpin	1	YYVLYIQPSCIHR	YYVLYIQPSC(UniMod:4)IHR	3	YYVLYIQPSC(UniMod:4)IHR3	94192.8	99447.3	106231
P62630	P62630;M0R757	EF1A1_RAT	Eef1a1	Elongation factor 1-alpha 1	0	YYVTIIDAPGHR	YYVTIIDAPGHR	2	YYVTIIDAPGHR2	28770.9	32902.1	27207.3
P62630	P62630;M0R757	EF1A1_RAT	Eef1a1	Elongation factor 1-alpha 1	0	YYVTIIDAPGHR	YYVTIIDAPGHR	3	YYVTIIDAPGHR3	196020	146191	106294
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	YYVYNSVSYSHQPCEDVCR	YYVYNSVSYSHQPC(UniMod:4)EDVC(UniMod:4)R	3	YYVYNSVSYSHQPC(UniMod:4)EDVC(UniMod:4)R3	194637	196270	181719
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	YYVYNSVSYSHQPCEDVCRR	YYVYNSVSYSHQPC(UniMod:4)EDVC(UniMod:4)RR	3	YYVYNSVSYSHQPC(UniMod:4)EDVC(UniMod:4)RR3	13629	13538.9	23488.3
Q4V7D9	Q4V7D9	Q4V7D9_RAT	Smpdl3b	Acid sphingomyelinase-like phosphodiesterase	1	YYVYNSVSYSHQPCEDVCRR	YYVYNSVSYSHQPC(UniMod:4)EDVC(UniMod:4)RR	4	YYVYNSVSYSHQPC(UniMod:4)EDVC(UniMod:4)RR4	35037.2	58117.8	53390.2
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	YYWGGLYSWDMSK	YYWGGLYSWDMSK	2	YYWGGLYSWDMSK2	8.3468e+06	7.644e+06	7.60704e+06
P14480	P14480	FIBB_RAT	Fgb	Fibrinogen beta chain	1	YYWGGLYSWDMSK	YYWGGLYSWDMSK	3	YYWGGLYSWDMSK3	34340.8	70439.9	64035
D3ZQN7	D3ZQN7	D3ZQN7_RAT	Lamb1	Laminin subunit beta 1	1	YYYAVYDMVVR	YYYAVYDMVVR	2	YYYAVYDMVVR2	40675	25841.7	41612.4
Q64240	Q64240	AMBP_RAT	Ambp	Protein AMBP	1	YYYNGASMACETFQYGGCLGNGNNFASEK	YYYNGASMAC(UniMod:4)ETFQYGGC(UniMod:4)LGNGNNFASEK	4	YYYNGASMAC(UniMod:4)ETFQYGGC(UniMod:4)LGNGNNFASEK4	44644.1	38470.8	33354.9
A0A8J8YFM3	A0A8J8YFM3	A0A8J8YFM3_RAT	Phkb	Phosphorylase b kinase regulatory subunit	1	YYYVPADFVEYEK	YYYVPADFVEYEK	2	YYYVPADFVEYEK2	23486.3	24974.1	33487.1
A0A0G2JYR4	A0A0G2JYR4	A0A0G2JYR4_RAT	Lrba	LPS responsive beige-like anchor protein	1	YYYWAVNPQDR	YYYWAVNPQDR	2	YYYWAVNPQDR2	2059.79	5282.77	4594.58
